Query 012876
Match_columns 454
No_of_seqs 175 out of 1385
Neff 8.5
Searched_HMMs 46136
Date Fri Mar 29 07:14:00 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012876.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/012876hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1282 Serine carboxypeptidas 100.0 2E-113 5E-118 859.5 39.5 400 33-452 24-453 (454)
2 PLN02209 serine carboxypeptida 100.0 2.3E-99 5E-104 767.4 41.7 402 8-449 4-437 (437)
3 PLN03016 sinapoylglucose-malat 100.0 5.1E-98 1E-102 757.6 40.9 384 35-449 19-433 (433)
4 PF00450 Peptidase_S10: Serine 100.0 7.3E-97 2E-101 757.4 31.6 381 43-446 1-415 (415)
5 PTZ00472 serine carboxypeptida 100.0 6.4E-91 1.4E-95 714.3 38.5 365 47-449 42-461 (462)
6 PLN02213 sinapoylglucose-malat 100.0 1.8E-68 3.8E-73 525.9 30.4 294 126-449 1-319 (319)
7 COG2939 Carboxypeptidase C (ca 100.0 6.4E-65 1.4E-69 503.6 20.9 363 50-448 65-492 (498)
8 KOG1283 Serine carboxypeptidas 100.0 4.2E-64 9E-69 465.4 14.0 374 53-445 4-412 (414)
9 TIGR01250 pro_imino_pep_2 prol 99.2 5.4E-09 1.2E-13 100.1 22.5 120 53-205 3-132 (288)
10 TIGR03611 RutD pyrimidine util 99.1 2.5E-09 5.5E-14 100.8 16.9 107 68-206 2-117 (257)
11 TIGR03056 bchO_mg_che_rel puta 99.1 1.6E-08 3.5E-13 97.1 20.3 100 78-207 25-133 (278)
12 PRK03204 haloalkane dehalogena 99.0 3.3E-08 7.1E-13 96.3 20.9 59 362-445 227-286 (286)
13 PHA02857 monoglyceride lipase; 99.0 2.6E-08 5.6E-13 96.2 20.0 114 64-205 10-133 (276)
14 PLN02824 hydrolase, alpha/beta 99.0 1.2E-08 2.5E-13 99.6 17.1 114 56-204 12-137 (294)
15 PRK00870 haloalkane dehalogena 99.0 7.6E-08 1.6E-12 94.4 22.4 131 35-203 7-149 (302)
16 PRK10673 acyl-CoA esterase; Pr 99.0 3.6E-08 7.9E-13 93.7 17.2 95 76-202 11-114 (255)
17 TIGR03343 biphenyl_bphD 2-hydr 98.9 3.3E-07 7.2E-12 88.5 22.4 59 362-445 223-281 (282)
18 PLN02679 hydrolase, alpha/beta 98.9 1.9E-07 4E-12 94.2 20.5 109 66-204 73-191 (360)
19 PLN02298 hydrolase, alpha/beta 98.8 2.7E-07 5.8E-12 91.7 19.7 130 52-206 32-171 (330)
20 TIGR02427 protocat_pcaD 3-oxoa 98.8 2.3E-07 4.9E-12 86.6 17.8 59 362-445 193-251 (251)
21 PRK06489 hypothetical protein; 98.8 1.3E-06 2.9E-11 87.9 24.1 59 362-446 292-356 (360)
22 PLN02385 hydrolase; alpha/beta 98.8 3.5E-07 7.5E-12 91.8 19.6 118 64-205 71-198 (349)
23 PRK03592 haloalkane dehalogena 98.8 2E-07 4.3E-12 91.0 16.5 106 64-206 16-130 (295)
24 PRK10349 carboxylesterase BioH 98.8 4.3E-07 9.4E-12 86.6 18.2 59 362-445 196-254 (256)
25 TIGR02240 PHA_depoly_arom poly 98.8 2.4E-07 5.2E-12 89.6 16.6 108 64-205 11-127 (276)
26 PF12697 Abhydrolase_6: Alpha/ 98.8 5.6E-08 1.2E-12 89.1 11.0 94 84-206 1-103 (228)
27 PLN03084 alpha/beta hydrolase 98.7 1.5E-06 3.4E-11 87.9 18.6 123 49-204 101-232 (383)
28 PLN02652 hydrolase; alpha/beta 98.6 2.4E-06 5.2E-11 87.0 19.1 116 64-205 120-246 (395)
29 PLN02894 hydrolase, alpha/beta 98.6 1.9E-06 4.1E-11 88.2 18.4 100 79-204 103-211 (402)
30 TIGR01738 bioH putative pimelo 98.6 1.5E-06 3.2E-11 80.9 16.2 58 362-444 188-245 (245)
31 PLN03087 BODYGUARD 1 domain co 98.6 1E-05 2.2E-10 83.9 23.6 67 355-446 410-478 (481)
32 KOG4178 Soluble epoxide hydrol 98.6 5.3E-07 1.1E-11 86.9 12.6 118 51-204 21-148 (322)
33 PLN02578 hydrolase 98.6 2.4E-06 5.2E-11 85.9 18.1 58 362-445 296-353 (354)
34 KOG4409 Predicted hydrolase/ac 98.6 1.8E-06 4E-11 83.5 16.1 129 49-208 62-199 (365)
35 PRK14875 acetoin dehydrogenase 98.6 3E-06 6.6E-11 85.3 17.9 94 79-203 129-231 (371)
36 TIGR01249 pro_imino_pep_1 prol 98.6 1.1E-05 2.5E-10 79.2 21.2 118 54-206 6-132 (306)
37 PRK11126 2-succinyl-6-hydroxy- 98.6 1.5E-06 3.2E-11 81.9 14.3 90 81-203 2-101 (242)
38 PRK10749 lysophospholipase L2; 98.6 1.2E-05 2.5E-10 80.1 21.3 116 64-205 40-167 (330)
39 TIGR03695 menH_SHCHC 2-succiny 98.5 1.7E-06 3.6E-11 80.5 13.5 96 81-204 1-105 (251)
40 PRK07581 hypothetical protein; 98.4 2.9E-05 6.3E-10 77.4 20.4 59 362-445 275-334 (339)
41 COG1506 DAP2 Dipeptidyl aminop 98.4 5.9E-06 1.3E-10 89.1 14.9 114 57-189 368-484 (620)
42 PRK08775 homoserine O-acetyltr 98.3 1.9E-05 4.1E-10 79.0 16.9 61 362-446 277-338 (343)
43 PLN02965 Probable pheophorbida 98.3 1.3E-05 2.8E-10 76.5 13.8 59 362-445 193-251 (255)
44 PLN02980 2-oxoglutarate decarb 98.3 2.7E-05 5.9E-10 92.4 19.0 98 78-203 1368-1479(1655)
45 PRK00175 metX homoserine O-ace 98.2 6.9E-05 1.5E-09 76.1 17.2 64 362-446 309-373 (379)
46 TIGR01607 PST-A Plasmodium sub 98.2 9.7E-05 2.1E-09 73.6 17.3 62 362-446 270-332 (332)
47 PLN02511 hydrolase 98.1 2.7E-05 5.7E-10 79.4 12.6 108 55-189 74-184 (388)
48 KOG1454 Predicted hydrolase/ac 98.1 9.3E-05 2E-09 73.4 15.0 60 362-446 264-323 (326)
49 PF00561 Abhydrolase_1: alpha/ 98.1 2.3E-05 5E-10 72.5 9.7 56 361-441 174-229 (230)
50 COG2267 PldB Lysophospholipase 98.0 0.00015 3.2E-09 71.1 15.3 128 52-208 9-146 (298)
51 PRK05855 short chain dehydroge 98.0 0.00064 1.4E-08 72.6 19.8 94 64-189 12-105 (582)
52 TIGR03100 hydr1_PEP hydrolase, 97.9 0.00054 1.2E-08 66.3 17.3 70 127-205 58-135 (274)
53 PRK10985 putative hydrolase; P 97.9 0.0013 2.9E-08 65.2 18.9 46 362-432 255-300 (324)
54 PRK05077 frsA fermentation/res 97.8 0.0015 3.3E-08 67.0 18.6 58 362-447 355-412 (414)
55 PLN02211 methyl indole-3-aceta 97.8 0.0025 5.5E-08 61.6 18.4 59 362-446 211-269 (273)
56 PLN02872 triacylglycerol lipas 97.7 0.00034 7.5E-09 71.2 12.2 61 362-446 325-388 (395)
57 PF00326 Peptidase_S9: Prolyl 97.5 0.0012 2.5E-08 61.2 11.8 84 125-210 13-105 (213)
58 PF10340 DUF2424: Protein of u 97.3 0.00048 1E-08 68.6 6.5 116 66-208 105-239 (374)
59 TIGR03101 hydr2_PEP hydrolase, 96.8 0.0074 1.6E-07 58.1 9.4 122 64-209 9-139 (266)
60 TIGR01840 esterase_phb esteras 96.6 0.007 1.5E-07 56.0 7.9 107 78-204 10-130 (212)
61 PRK10115 protease 2; Provision 96.5 0.098 2.1E-06 57.3 16.5 131 57-208 419-563 (686)
62 KOG1455 Lysophospholipase [Lip 96.4 0.033 7.2E-07 53.5 10.9 120 64-205 37-165 (313)
63 PF08386 Abhydrolase_4: TAP-li 96.4 0.016 3.4E-07 47.3 7.4 65 362-451 34-98 (103)
64 KOG2564 Predicted acetyltransf 96.4 0.01 2.2E-07 56.2 7.0 99 78-201 71-179 (343)
65 TIGR02821 fghA_ester_D S-formy 96.3 0.041 9E-07 53.1 11.5 32 175-206 135-175 (275)
66 COG0596 MhpC Predicted hydrola 96.0 0.044 9.5E-07 50.2 9.5 96 81-206 21-125 (282)
67 PLN02442 S-formylglutathione h 96.0 0.027 5.8E-07 54.8 8.1 47 362-429 217-264 (283)
68 PF03583 LIP: Secretory lipase 95.9 0.32 6.8E-06 47.5 15.2 69 362-451 219-289 (290)
69 TIGR01392 homoserO_Ac_trn homo 95.9 0.012 2.6E-07 59.0 5.3 63 362-445 288-351 (351)
70 PRK10566 esterase; Provisional 95.8 0.066 1.4E-06 50.5 9.8 62 362-446 186-247 (249)
71 PRK06765 homoserine O-acetyltr 95.7 0.033 7.1E-07 56.7 7.6 65 362-447 323-388 (389)
72 TIGR01838 PHA_synth_I poly(R)- 95.6 0.58 1.3E-05 49.6 16.6 49 362-435 415-463 (532)
73 COG3509 LpqC Poly(3-hydroxybut 95.2 0.2 4.2E-06 48.2 10.6 116 64-204 44-179 (312)
74 cd00707 Pancreat_lipase_like P 95.2 0.022 4.8E-07 55.1 4.3 103 78-204 33-147 (275)
75 TIGR00976 /NonD putative hydro 95.1 0.079 1.7E-06 56.6 8.7 120 64-207 6-135 (550)
76 KOG4391 Predicted alpha/beta h 94.8 0.68 1.5E-05 42.5 12.4 164 9-206 14-186 (300)
77 KOG1515 Arylacetamide deacetyl 94.4 0.31 6.7E-06 48.4 10.1 130 54-208 63-211 (336)
78 PLN00021 chlorophyllase 94.3 0.13 2.7E-06 50.8 7.3 109 69-206 42-168 (313)
79 KOG2100 Dipeptidyl aminopeptid 94.3 0.084 1.8E-06 58.3 6.4 67 362-450 682-749 (755)
80 TIGR03230 lipo_lipase lipoprot 94.0 0.26 5.7E-06 50.7 9.1 72 126-203 73-153 (442)
81 PF10230 DUF2305: Uncharacteri 93.2 0.68 1.5E-05 44.5 10.0 109 81-208 2-126 (266)
82 PRK10566 esterase; Provisional 91.9 0.25 5.5E-06 46.4 5.1 103 67-189 13-118 (249)
83 PRK11460 putative hydrolase; P 91.8 0.3 6.5E-06 45.9 5.4 62 362-444 148-209 (232)
84 KOG1838 Alpha/beta hydrolase [ 91.7 1.1 2.4E-05 45.3 9.5 96 78-203 122-235 (409)
85 TIGR01392 homoserO_Ac_trn homo 91.7 1.1 2.4E-05 44.7 9.8 120 64-204 15-162 (351)
86 PRK10162 acetyl esterase; Prov 91.2 0.53 1.2E-05 46.5 6.7 49 157-206 134-197 (318)
87 PF12695 Abhydrolase_5: Alpha/ 90.6 0.49 1.1E-05 40.1 5.1 86 83-203 1-94 (145)
88 KOG2382 Predicted alpha/beta h 89.7 0.68 1.5E-05 45.2 5.7 59 362-445 253-311 (315)
89 PF06500 DUF1100: Alpha/beta h 89.5 0.22 4.7E-06 50.6 2.2 73 126-207 218-299 (411)
90 PRK11460 putative hydrolase; P 89.2 2.3 4.9E-05 39.9 8.9 45 159-204 85-138 (232)
91 COG0596 MhpC Predicted hydrola 88.3 1.4 3.1E-05 39.9 6.8 60 361-444 220-279 (282)
92 PF02230 Abhydrolase_2: Phosph 88.3 0.76 1.6E-05 42.5 4.9 59 362-445 155-213 (216)
93 PRK11071 esterase YqiA; Provis 88.1 1.5 3.3E-05 39.8 6.7 54 362-445 136-189 (190)
94 PF00975 Thioesterase: Thioest 87.8 1.7 3.8E-05 40.0 7.1 91 83-204 2-104 (229)
95 PRK13604 luxD acyl transferase 87.6 2.1 4.6E-05 41.9 7.6 57 362-442 202-258 (307)
96 KOG2182 Hydrolytic enzymes of 87.6 2.9 6.3E-05 43.1 8.7 37 153-189 147-183 (514)
97 KOG1552 Predicted alpha/beta h 87.6 1.7 3.8E-05 41.0 6.7 99 79-205 58-164 (258)
98 PF12695 Abhydrolase_5: Alpha/ 86.4 1.3 2.8E-05 37.3 5.0 44 360-427 102-145 (145)
99 KOG3975 Uncharacterized conser 85.9 2.5 5.5E-05 39.7 6.7 104 66-189 14-121 (301)
100 TIGR01836 PHA_synth_III_C poly 85.8 1.6 3.5E-05 43.5 6.1 61 362-446 286-349 (350)
101 KOG3101 Esterase D [General fu 85.7 17 0.00038 33.5 11.7 166 51-232 8-203 (283)
102 PF10503 Esterase_phd: Esteras 85.5 3.2 7E-05 38.7 7.4 26 362-387 169-194 (220)
103 COG0400 Predicted esterase [Ge 84.9 1.4 3.1E-05 40.6 4.6 59 362-446 146-204 (207)
104 PRK05371 x-prolyl-dipeptidyl a 84.6 1.9 4.1E-05 48.0 6.3 79 125-206 278-375 (767)
105 PF02129 Peptidase_S15: X-Pro 84.5 1.9 4.1E-05 41.4 5.6 75 127-209 58-141 (272)
106 KOG2183 Prolylcarboxypeptidase 84.5 2.5 5.5E-05 42.6 6.4 60 126-189 111-178 (492)
107 PF07519 Tannase: Tannase and 84.0 2 4.3E-05 45.0 5.8 88 351-451 342-431 (474)
108 PF05677 DUF818: Chlamydia CHL 83.7 1.4 3.1E-05 43.4 4.3 89 76-189 132-226 (365)
109 cd00312 Esterase_lipase Estera 83.4 4.9 0.00011 42.1 8.6 48 157-205 156-214 (493)
110 PRK10439 enterobactin/ferric e 80.5 16 0.00034 37.6 10.7 27 178-204 288-323 (411)
111 PLN02454 triacylglycerol lipas 79.5 3.2 6.9E-05 42.3 5.2 35 154-189 205-239 (414)
112 PF02230 Abhydrolase_2: Phosph 78.9 6.6 0.00014 36.1 6.9 51 156-208 85-144 (216)
113 PF05577 Peptidase_S28: Serine 78.8 4 8.7E-05 42.1 5.9 65 152-216 87-160 (434)
114 PF10081 Abhydrolase_9: Alpha/ 77.1 5.7 0.00012 38.2 5.8 37 153-189 84-120 (289)
115 PF06342 DUF1057: Alpha/beta h 76.8 49 0.0011 32.0 11.9 88 352-443 202-295 (297)
116 COG4099 Predicted peptidase [G 76.1 31 0.00068 33.6 10.3 43 161-203 252-303 (387)
117 KOG2551 Phospholipase/carboxyh 75.5 7.6 0.00016 36.0 5.9 59 362-446 163-223 (230)
118 KOG4627 Kynurenine formamidase 75.4 3.3 7.2E-05 37.9 3.6 101 78-206 64-174 (270)
119 PRK11071 esterase YqiA; Provis 75.2 5.1 0.00011 36.3 4.9 65 82-189 2-72 (190)
120 KOG1552 Predicted alpha/beta h 73.8 5.3 0.00012 37.8 4.7 60 362-446 192-251 (258)
121 PRK13604 luxD acyl transferase 73.4 24 0.00051 34.7 9.2 116 64-205 19-142 (307)
122 PF01764 Lipase_3: Lipase (cla 70.7 6.1 0.00013 33.3 4.1 31 156-189 45-75 (140)
123 TIGR03502 lipase_Pla1_cef extr 70.0 24 0.00051 39.3 9.2 91 80-189 448-566 (792)
124 KOG2281 Dipeptidyl aminopeptid 68.7 10 0.00022 40.6 5.7 115 66-208 624-766 (867)
125 PF05990 DUF900: Alpha/beta hy 68.6 5 0.00011 37.7 3.3 49 156-207 74-140 (233)
126 PLN02733 phosphatidylcholine-s 66.8 13 0.00027 38.6 6.1 46 135-189 128-173 (440)
127 cd00519 Lipase_3 Lipase (class 65.9 9.6 0.00021 35.4 4.7 45 157-204 110-168 (229)
128 PF05728 UPF0227: Uncharacteri 65.3 5.5 0.00012 36.1 2.8 35 176-211 57-98 (187)
129 PF06057 VirJ: Bacterial virul 65.1 9.6 0.00021 34.6 4.2 52 153-207 46-110 (192)
130 COG4425 Predicted membrane pro 65.0 14 0.0003 37.8 5.7 36 154-189 373-408 (588)
131 KOG1553 Predicted alpha/beta h 64.8 12 0.00027 36.9 5.1 53 146-203 284-344 (517)
132 COG0400 Predicted esterase [Ge 64.0 33 0.00072 31.6 7.7 55 153-208 75-138 (207)
133 COG0657 Aes Esterase/lipase [L 62.7 78 0.0017 30.7 10.7 50 158-208 133-195 (312)
134 PF07859 Abhydrolase_3: alpha/ 61.9 10 0.00022 34.4 3.9 32 175-206 68-112 (211)
135 PRK07868 acyl-CoA synthetase; 61.6 15 0.00033 42.3 6.1 61 362-447 297-361 (994)
136 PF08840 BAAT_C: BAAT / Acyl-C 61.0 11 0.00025 34.7 4.1 39 166-204 10-56 (213)
137 PF11144 DUF2920: Protein of u 60.2 13 0.00028 37.7 4.6 51 157-207 162-222 (403)
138 PF06821 Ser_hydrolase: Serine 58.4 17 0.00037 32.4 4.7 44 362-431 114-157 (171)
139 PRK06765 homoserine O-acetyltr 58.1 14 0.0003 37.7 4.5 44 153-203 142-195 (389)
140 PF11288 DUF3089: Protein of u 56.9 12 0.00026 34.5 3.4 32 156-189 75-106 (207)
141 cd00741 Lipase Lipase. Lipase 56.8 13 0.00029 32.0 3.6 31 156-189 9-39 (153)
142 COG1073 Hydrolases of the alph 54.2 28 0.0006 32.8 5.8 61 363-446 233-296 (299)
143 PF05448 AXE1: Acetyl xylan es 54.1 56 0.0012 32.3 7.9 130 64-204 66-209 (320)
144 PF03959 FSH1: Serine hydrolas 53.7 13 0.00027 34.3 3.1 49 362-435 161-209 (212)
145 PLN02442 S-formylglutathione h 53.7 22 0.00049 34.2 5.0 48 157-207 125-181 (283)
146 PLN02571 triacylglycerol lipas 53.6 15 0.00033 37.5 3.8 34 155-189 204-237 (413)
147 PLN03082 Iron-sulfur cluster a 51.9 13 0.00028 32.9 2.7 66 79-145 76-148 (163)
148 PRK10252 entF enterobactin syn 50.9 83 0.0018 37.3 10.1 91 81-203 1068-1170(1296)
149 TIGR03712 acc_sec_asp2 accesso 50.8 89 0.0019 32.6 8.7 107 66-207 277-393 (511)
150 smart00824 PKS_TE Thioesterase 50.8 58 0.0013 28.7 7.1 64 126-202 25-100 (212)
151 COG1647 Esterase/lipase [Gener 50.6 50 0.0011 30.8 6.3 61 362-445 181-242 (243)
152 PLN02753 triacylglycerol lipas 50.1 28 0.00061 36.6 5.2 37 153-189 285-323 (531)
153 COG2945 Predicted hydrolase of 49.8 25 0.00053 32.0 4.1 57 362-445 149-205 (210)
154 KOG3079 Uridylate kinase/adeny 49.6 9.8 0.00021 34.3 1.6 16 79-94 5-20 (195)
155 PF03283 PAE: Pectinacetyleste 49.5 1.1E+02 0.0023 30.9 9.2 120 64-189 34-167 (361)
156 PRK11190 Fe/S biogenesis prote 49.3 13 0.00028 33.8 2.4 64 83-147 25-96 (192)
157 PF09292 Neil1-DNA_bind: Endon 48.8 10 0.00023 24.3 1.1 12 81-92 24-35 (39)
158 PF12146 Hydrolase_4: Putative 47.3 1.1E+02 0.0024 23.2 7.0 78 65-166 2-79 (79)
159 TIGR01836 PHA_synth_III_C poly 46.7 37 0.00081 33.7 5.5 71 127-208 95-175 (350)
160 PF00151 Lipase: Lipase; Inte 46.0 4.9 0.00011 40.0 -1.0 93 78-189 68-161 (331)
161 PF08538 DUF1749: Protein of u 45.6 42 0.00092 32.8 5.4 59 153-211 82-155 (303)
162 PLN02719 triacylglycerol lipas 45.1 23 0.00051 37.0 3.7 36 154-189 272-309 (518)
163 PLN02310 triacylglycerol lipas 45.0 33 0.00071 35.0 4.7 35 155-189 185-220 (405)
164 PF06259 Abhydrolase_8: Alpha/ 44.9 51 0.0011 29.6 5.4 56 125-189 62-120 (177)
165 PLN02408 phospholipase A1 44.9 24 0.00051 35.5 3.6 33 156-189 179-211 (365)
166 COG2819 Predicted hydrolase of 43.9 2.7E+02 0.0059 26.7 10.3 49 157-206 112-174 (264)
167 COG3208 GrsT Predicted thioest 43.8 52 0.0011 31.1 5.4 59 362-445 176-234 (244)
168 PLN02324 triacylglycerol lipas 43.6 27 0.00058 35.7 3.8 36 153-189 191-226 (415)
169 PF03403 PAF-AH_p_II: Platelet 43.4 12 0.00027 37.9 1.4 32 178-209 228-267 (379)
170 PRK05371 x-prolyl-dipeptidyl a 43.2 49 0.0011 37.0 6.2 64 362-447 455-523 (767)
171 PF00756 Esterase: Putative es 43.0 55 0.0012 30.4 5.8 28 180-207 117-153 (251)
172 COG0627 Predicted esterase [Ge 42.9 56 0.0012 32.3 5.9 121 80-207 52-190 (316)
173 PRK14567 triosephosphate isome 42.8 52 0.0011 31.3 5.4 51 155-208 178-239 (253)
174 PF08237 PE-PPE: PE-PPE domain 41.6 65 0.0014 30.1 5.8 71 128-204 4-90 (225)
175 PRK14566 triosephosphate isome 41.5 56 0.0012 31.3 5.4 50 155-207 188-248 (260)
176 PLN02802 triacylglycerol lipas 41.0 40 0.00088 35.3 4.7 33 156-189 309-341 (509)
177 PF07172 GRP: Glycine rich pro 40.9 24 0.00051 28.2 2.4 8 1-8 1-8 (95)
178 PF07819 PGAP1: PGAP1-like pro 40.9 34 0.00073 31.9 3.9 35 155-189 60-96 (225)
179 PF00681 Plectin: Plectin repe 40.6 33 0.00071 23.1 2.7 33 201-233 11-43 (45)
180 PF10503 Esterase_phd: Esteras 39.3 28 0.00061 32.4 3.0 38 167-204 86-132 (220)
181 TIGR01911 HesB_rel_seleno HesB 39.1 31 0.00067 27.3 2.8 57 83-140 28-89 (92)
182 PLN02934 triacylglycerol lipas 37.1 35 0.00077 35.7 3.6 28 159-189 305-332 (515)
183 PLN02162 triacylglycerol lipas 36.4 35 0.00075 35.4 3.3 28 159-189 262-289 (475)
184 PLN00413 triacylglycerol lipas 36.4 30 0.00066 35.9 2.9 27 160-189 269-295 (479)
185 COG0429 Predicted hydrolase of 35.2 69 0.0015 31.7 5.0 108 64-203 60-185 (345)
186 PLN02429 triosephosphate isome 34.2 77 0.0017 31.2 5.2 50 156-208 239-300 (315)
187 PLN02761 lipase class 3 family 34.0 44 0.00096 35.1 3.7 37 153-189 266-305 (527)
188 PF06821 Ser_hydrolase: Serine 33.4 44 0.00095 29.7 3.2 41 164-205 42-92 (171)
189 KOG2984 Predicted hydrolase [G 33.0 72 0.0016 29.4 4.4 93 64-189 30-125 (277)
190 PLN03037 lipase class 3 family 31.9 46 0.00099 35.0 3.4 34 156-189 295-329 (525)
191 PF06414 Zeta_toxin: Zeta toxi 31.5 40 0.00087 30.5 2.7 35 78-113 11-51 (199)
192 PLN02847 triacylglycerol lipas 31.5 47 0.001 35.5 3.4 34 153-189 225-262 (633)
193 PF01738 DLH: Dienelactone hyd 31.2 1.4E+02 0.0031 27.0 6.5 45 362-427 145-189 (218)
194 PRK04940 hypothetical protein; 30.5 66 0.0014 29.0 3.8 54 153-210 38-98 (180)
195 TIGR02011 IscA iron-sulfur clu 30.4 40 0.00088 27.2 2.3 65 81-146 22-92 (105)
196 PRK06762 hypothetical protein; 29.8 31 0.00066 30.1 1.6 21 82-103 2-24 (166)
197 TIGR03341 YhgI_GntY IscR-regul 29.3 55 0.0012 29.7 3.1 64 82-146 23-94 (190)
198 KOG2382 Predicted alpha/beta h 29.2 93 0.002 30.6 4.8 89 75-189 46-134 (315)
199 PF05057 DUF676: Putative seri 29.0 62 0.0013 29.9 3.5 36 153-189 54-89 (217)
200 PLN02561 triosephosphate isome 28.6 1.1E+02 0.0024 29.2 5.1 48 156-206 180-239 (253)
201 PRK09504 sufA iron-sulfur clus 28.5 48 0.001 27.7 2.4 64 81-145 39-108 (122)
202 PF10609 ParA: ParA/MinD ATPas 28.0 38 0.00083 26.2 1.6 12 128-139 2-13 (81)
203 PLN03207 stomagen; Provisional 27.8 1E+02 0.0022 24.6 3.8 23 4-26 10-33 (113)
204 COG4757 Predicted alpha/beta h 27.5 1.4E+02 0.003 28.2 5.3 58 127-189 58-116 (281)
205 PF08840 BAAT_C: BAAT / Acyl-C 27.0 45 0.00097 30.7 2.2 48 362-428 115-163 (213)
206 PRK09502 iscA iron-sulfur clus 26.9 33 0.00072 27.8 1.2 64 82-146 25-94 (107)
207 TIGR01840 esterase_phb esteras 26.9 47 0.001 30.3 2.3 27 363-389 169-195 (212)
208 PF01555 N6_N4_Mtase: DNA meth 26.6 79 0.0017 28.6 3.9 40 128-171 2-41 (231)
209 PF11187 DUF2974: Protein of u 26.4 78 0.0017 29.5 3.7 24 162-189 72-95 (224)
210 PF01583 APS_kinase: Adenylyls 26.1 38 0.00083 29.7 1.5 25 81-106 1-31 (156)
211 PRK00042 tpiA triosephosphate 26.1 1.5E+02 0.0032 28.2 5.5 49 156-208 180-240 (250)
212 COG2945 Predicted hydrolase of 25.7 95 0.0021 28.4 3.9 63 135-205 68-138 (210)
213 COG3319 Thioesterase domains o 25.3 3.2E+02 0.007 26.1 7.7 31 153-189 46-76 (257)
214 PF06309 Torsin: Torsin; Inte 25.2 59 0.0013 27.4 2.4 18 77-94 48-65 (127)
215 PF05782 ECM1: Extracellular m 25.0 63 0.0014 33.2 2.9 43 1-43 1-43 (544)
216 PF15253 STIL_N: SCL-interrupt 24.6 94 0.002 31.7 4.1 35 52-89 200-235 (410)
217 PF15613 WHIM2: WSTF, HB1, Itc 24.5 1.4E+02 0.003 19.5 3.4 27 66-92 12-38 (38)
218 cd00311 TIM Triosephosphate is 23.6 1.8E+02 0.0038 27.6 5.6 48 156-207 176-235 (242)
219 PRK14731 coaE dephospho-CoA ki 23.5 87 0.0019 28.6 3.4 32 80-112 3-36 (208)
220 KOG3724 Negative regulator of 23.3 98 0.0021 34.3 4.1 91 81-189 90-193 (973)
221 PF14020 DUF4236: Protein of u 23.2 85 0.0019 22.3 2.5 15 128-143 40-54 (55)
222 PF05576 Peptidase_S37: PS-10 23.1 8.5E+02 0.018 25.2 11.7 119 77-221 59-187 (448)
223 PF12740 Chlorophyllase2: Chlo 22.8 1.2E+02 0.0026 29.0 4.2 52 153-204 62-131 (259)
224 COG3208 GrsT Predicted thioest 22.6 1.1E+02 0.0025 28.8 3.9 52 127-189 34-85 (244)
225 KOG4667 Predicted esterase [Li 22.0 1.4E+02 0.003 28.0 4.2 48 362-434 199-246 (269)
226 PF03096 Ndr: Ndr family; Int 21.8 62 0.0013 31.4 2.1 62 362-448 219-280 (283)
227 PF07849 DUF1641: Protein of u 21.6 48 0.001 22.0 0.9 18 309-326 15-32 (42)
228 TIGR01849 PHB_depoly_PhaZ poly 21.5 1.6E+02 0.0034 30.2 5.1 63 362-445 338-404 (406)
229 PTZ00333 triosephosphate isome 21.0 1.8E+02 0.004 27.7 5.1 49 155-206 182-242 (255)
230 PF00809 Pterin_bind: Pterin b 20.8 1.5E+02 0.0032 27.2 4.4 30 129-171 165-194 (210)
231 PF05448 AXE1: Acetyl xylan es 20.4 1.5E+02 0.0033 29.2 4.6 56 362-441 262-318 (320)
232 PF05576 Peptidase_S37: PS-10 20.3 3.1E+02 0.0068 28.2 6.7 67 355-448 344-415 (448)
No 1
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=100.00 E-value=2.3e-113 Score=859.49 Aligned_cols=400 Identities=47% Similarity=0.910 Sum_probs=364.7
Q ss_pred cccCcceecCCCCC-CCCceeEEEeEEecCCCCceeEEEEEEecCCCCCCCeEEEeCCCCCchhhchhhhhhcCCeEEcC
Q 012876 33 EADADRVRDLPGQP-KVEFKHYAGYVKLRPNDHKALFYWFFEAQKGVSSKPLVLWLNGGPGCSSIAYGAAQELGPFLVGG 111 (454)
Q Consensus 33 ~~~~~~v~~lpg~~-~~~~~~~sGyl~v~~~~~~~lfy~f~es~~~~~~~PlilWlnGGPG~SS~~~g~f~E~GP~~~~~ 111 (454)
.++.++|+.|||++ .++|++|||||+|+++.+++||||||||+++|++|||||||||||||||+. |+|.|+|||+|+.
T Consensus 24 ~~~~~~I~~LPG~~~~~~f~~ysGYv~v~~~~~~~LFYwf~eS~~~P~~dPlvLWLnGGPGCSSl~-G~~~E~GPf~v~~ 102 (454)
T KOG1282|consen 24 VDEADLIKSLPGQPGPLPFKQYSGYVTVNESEGRQLFYWFFESENNPETDPLVLWLNGGPGCSSLG-GLFEENGPFRVKY 102 (454)
T ss_pred cchhhhhhcCCCCCCCCCcccccceEECCCCCCceEEEEEEEccCCCCCCCEEEEeCCCCCccchh-hhhhhcCCeEEcC
Confidence 34788999999998 489999999999998888999999999999999999999999999999995 9999999999999
Q ss_pred CCCcccccCCCcccccceEEEeCCCccCCCCcCCCCCCcccChHHhHHHHHHHHHHHHHHCCCCCCCCeEEEcccccc--
Q 012876 112 NGSRLKFNKYSWNKAANMLFLEAPVGVGFSYTNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAD-- 189 (454)
Q Consensus 112 ~~~~l~~N~~sW~~~anvlyIDqPvGtGfSy~~~~~~~~~~~~~~~A~~~~~fL~~f~~~fp~~~~~~~yI~GESYgG-- 189 (454)
+|.+|+.|||||||.||||||||||||||||++++.++.+ +|+.+|+|++.||++||++||||++|||||+||||||
T Consensus 103 ~G~tL~~N~ySWnk~aNiLfLd~PvGvGFSYs~~~~~~~~-~D~~~A~d~~~FL~~wf~kfPey~~~~fyI~GESYAG~Y 181 (454)
T KOG1282|consen 103 NGKTLYLNPYSWNKEANILFLDQPVGVGFSYSNTSSDYKT-GDDGTAKDNYEFLQKWFEKFPEYKSNDFYIAGESYAGHY 181 (454)
T ss_pred CCCcceeCCccccccccEEEEecCCcCCccccCCCCcCcC-CcHHHHHHHHHHHHHHHHhChhhcCCCeEEeccccccee
Confidence 9889999999999999999999999999999999888875 9999999999999999999999999999999999999
Q ss_pred -----------------cccCcceeeeecccccCCCccchhHHHhhhcccCCHHHHHHHHHhcccCC------CCChhhH
Q 012876 190 -----------------SFINLKGFMIGNAVINDPTDTKGLVDYAWSHAIISDKLYKDISKECDFGQ------SMIRSNC 246 (454)
Q Consensus 190 -----------------~~inLkGi~iGng~~~p~~~~~s~~~f~~~~gli~~~~~~~l~~~c~~~~------~~~~~~c 246 (454)
+.|||||++||||++|+..|..++.+|+|.||+|+++.++.+++.|.... ......|
T Consensus 182 VP~La~~I~~~N~~~~~~~iNLkG~~IGNg~td~~~~~~~~~~~a~~h~liSde~~~~l~~~C~~~~~~~~~~~~~~~~C 261 (454)
T KOG1282|consen 182 VPALAQEILKGNKKCCKPNINLKGYAIGNGLTDPEIDYNGRIPFAWGHGLISDELYESLKRACDFSSDNYANVDPSNTKC 261 (454)
T ss_pred hHHHHHHHHhccccccCCcccceEEEecCcccCccccccchhhhhhhcccCCHHHHHHHHHHhccCcccccccCCchhHH
Confidence 36999999999999999999999999999999999999999999998742 2336789
Q ss_pred HHHHHHHH-HHcCCCCcccCCcccccCCCCCCCCCccccCCcccccccccCCCCCCCCCCchhHHHhhhCcHHHHhHccc
Q 012876 247 NDHIRGFV-EAYAEIDIYSIYSPVCLDSLDGKAPPKLMVAPHLLTQHDLWHRLPSGYDPCAEDYVMKFFNREDVQRALHA 325 (454)
Q Consensus 247 ~~~~~~~~-~~~g~in~y~i~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pc~~~~~~~ylN~~~V~~aL~v 325 (454)
.++++.+. ...++++.|+++.+.|...... + . .......+++|...+.+.|||+++||+||||
T Consensus 262 ~~~~~~~~~~~~~~i~~y~i~~~~C~~~~~~---~-~------------~~~~~~~~~~c~~~~~~~ylN~~~VrkALh~ 325 (454)
T KOG1282|consen 262 NKAVEEFDSKTTGDIDNYYILTPDCYPTSYE---L-K------------KPTDCYGYDPCLSDYAEKYLNRPEVRKALHA 325 (454)
T ss_pred HHHHHHHHHHHhccCchhhhcchhhcccccc---c-c------------ccccccccCCchhhhHHHhcCCHHHHHHhCC
Confidence 99999888 5557899999999999752100 0 0 0111245689998777999999999999999
Q ss_pred CccCCCcCcccccccc-cccccCCCCHHHHHHHHHhcC-CeEEEEecCCCcccCchHHHHHHHHcCCCCccceeeceeC-
Q 012876 326 NITKLSYPYTTCSGVI-SKWNDSAETVLPIIQKLLNAG-LRIWVYSGDTDGRVPVTSTRYSINKMGLKIKEEWRAWFHK- 402 (454)
Q Consensus 326 ~~~~~~~~~~~cs~~v-~~~~~~~~~~~~~l~~lL~~~-~rVliy~Gd~D~i~~~~Gt~~~i~~L~w~~~~~~~~w~~~- 402 (454)
+....+ .|+.||..| ..|.+...+|++.+.+++.++ +|||||+||.|++||+.||++||++|+++...+||||+++
T Consensus 326 ~~~~~~-~W~~Cn~~v~~~~~~~~~sm~p~~~~~~~~~~~rvliysGD~D~~~p~~gt~~~i~~L~~~~~~~~~pW~~~~ 404 (454)
T KOG1282|consen 326 NKTSIG-KWERCNDEVNYNYNDDIKSMLPIHKKLIASGGYRVLIYSGDHDLVVPFLGTQAWIKSLNLSITDEWRPWYHKG 404 (454)
T ss_pred CCCCCC-cccccChhhhcccccCccchHHHHHHHhhcCceEEEEEeCCcceeCcchhhHHHHHhccCccccCccCCccCC
Confidence 986423 799999999 679999999999999999865 9999999999999999999999999999999999999996
Q ss_pred CeEeEEEEEeecCeEEEEEcCCccccccCChHHHHHHHHHHHcCCCCCCC
Q 012876 403 HQVAGWVETYEKGLTLVTVRGAGHQVPAFAPAQSLSLFTKFLSAATLPSA 452 (454)
Q Consensus 403 ~~~~Gy~~~~~~~Ltf~~V~gAGHmvP~dqP~~a~~~i~~fl~~~~~~~~ 452 (454)
+|+|||+++|+ +|+|+||+|||||||.|||++|++||++||.|+++++.
T Consensus 405 ~qvaG~~~~Y~-~ltf~tVrGaGH~VP~~~p~~al~m~~~fl~g~~l~~~ 453 (454)
T KOG1282|consen 405 GQVAGYTKTYG-GLTFATVRGAGHMVPYDKPESALIMFQRFLNGQPLPST 453 (454)
T ss_pred CceeeeEEEec-CEEEEEEeCCcccCCCCCcHHHHHHHHHHHcCCCCCCC
Confidence 89999999999 89999999999999999999999999999999999875
No 2
>PLN02209 serine carboxypeptidase
Probab=100.00 E-value=2.3e-99 Score=767.39 Aligned_cols=402 Identities=30% Similarity=0.570 Sum_probs=340.3
Q ss_pred HHHHHHHHHHHHHhhhccccccCCccccCcceecCCCCC-CCCceeEEEeEEecCCCCceeEEEEEEecCCCCCCCeEEE
Q 012876 8 LLCFMLCTLLVSAVASRSRVSHQTTEADADRVRDLPGQP-KVEFKHYAGYVKLRPNDHKALFYWFFEAQKGVSSKPLVLW 86 (454)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~lpg~~-~~~~~~~sGyl~v~~~~~~~lfy~f~es~~~~~~~PlilW 86 (454)
.|-++|+.|||+..+. +..++|+.|||+. ++++++||||++|+++.+++||||||||+++|+++|||||
T Consensus 4 ~~~~~~~~~~~~~~~~----------~~~~~v~~lpg~~~~~~~~~~sGy~~v~~~~~~~lf~~f~es~~~~~~~Pl~lW 73 (437)
T PLN02209 4 ILKFMLLILLVSSHHV----------RSGSIVKFLPGFKGPLPFELETGYIGIGEEENVQFFYYFIKSDKNPQEDPLIIW 73 (437)
T ss_pred HHHHHHHHHHHhcccC----------CccCeeecCCCCCCCCCeeEEEEEEEecCCCCeEEEEEEEecCCCCCCCCEEEE
Confidence 4778888888874322 2678899999996 6899999999999977678999999999999999999999
Q ss_pred eCCCCCchhhchhhhhhcCCeEEcCCC-----CcccccCCCcccccceEEEeCCCccCCCCcCCCCCCcccChHHhHHHH
Q 012876 87 LNGGPGCSSIAYGAAQELGPFLVGGNG-----SRLKFNKYSWNKAANMLFLEAPVGVGFSYTNNSEDLHKLGDQVTANDS 161 (454)
Q Consensus 87 lnGGPG~SS~~~g~f~E~GP~~~~~~~-----~~l~~N~~sW~~~anvlyIDqPvGtGfSy~~~~~~~~~~~~~~~A~~~ 161 (454)
|||||||||| +|+|.|+|||+++.++ .++++|||||++.|||||||||+||||||+.+...+. +++++|+++
T Consensus 74 lnGGPG~SS~-~g~f~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiDqPvGtGfSy~~~~~~~~--~~~~~a~~~ 150 (437)
T PLN02209 74 LNGGPGCSCL-SGLFFENGPLALKNKVYNGSVPSLVSTTYSWTKTANIIFLDQPVGSGFSYSKTPIERT--SDTSEVKKI 150 (437)
T ss_pred ECCCCcHHHh-hhHHHhcCCceeccCCCCCCcccceeCCCchhhcCcEEEecCCCCCCccCCCCCCCcc--CCHHHHHHH
Confidence 9999999999 6999999999998763 3799999999999999999999999999987665544 566788999
Q ss_pred HHHHHHHHHHCCCCCCCCeEEEcccccc-------------------cccCcceeeeecccccCCCccchhHHHhhhccc
Q 012876 162 YAFLIGWFKRFPNFKSHDFYIAGESYAD-------------------SFINLKGFMIGNAVINDPTDTKGLVDYAWSHAI 222 (454)
Q Consensus 162 ~~fL~~f~~~fp~~~~~~~yI~GESYgG-------------------~~inLkGi~iGng~~~p~~~~~s~~~f~~~~gl 222 (454)
++||+.||++||+|+++||||+|||||| .+||||||+||||++||..|..++.+|++.+|+
T Consensus 151 ~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~~a~~i~~~~~~~~~~~inl~Gi~igng~td~~~q~~~~~~y~~~~gl 230 (437)
T PLN02209 151 HEFLQKWLIKHPQFLSNPFYVVGDSYSGMIVPALVHEISKGNYICCNPPINLQGYVLGNPITHIEFEQNFRIPYAHGMSL 230 (437)
T ss_pred HHHHHHHHHhCccccCCCEEEEecCcCceehHHHHHHHHhhcccccCCceeeeeEEecCcccChhhhhhhHHHHHhccCC
Confidence 9999999999999999999999999999 259999999999999999999999999999999
Q ss_pred CCHHHHHHHHHhcccCC---CCChhhHHHHHHHHHHHcCCCCcccCCcccccCCCCCCCCCccccCCcccccccccCCCC
Q 012876 223 ISDKLYKDISKECDFGQ---SMIRSNCNDHIRGFVEAYAEIDIYSIYSPVCLDSLDGKAPPKLMVAPHLLTQHDLWHRLP 299 (454)
Q Consensus 223 i~~~~~~~l~~~c~~~~---~~~~~~c~~~~~~~~~~~g~in~y~i~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (454)
|++++++.+++.|.... ......|.+++..+....+.++.|++....|......
T Consensus 231 I~~~~~~~~~~~c~~~~~~~~~~~~~C~~~i~~~~~~~~~~~~~~~~~~~c~~~~~~----------------------- 287 (437)
T PLN02209 231 ISDELYESLKRICKGNYFSVDPSNKKCLKLVEEYHKCTDNINSHHTLIANCDDSNTQ----------------------- 287 (437)
T ss_pred CCHHHHHHHHHhcccccccCCCChHHHHHHHHHHHHHhhcCCccccccccccccccc-----------------------
Confidence 99999999999996421 1345789988887666666788887665557432100
Q ss_pred CCCCCCch---hHHHhhhCcHHHHhHcccCccCCCcCcccccccccccccCCCCHHHHHHHHHhcCCeEEEEecCCCccc
Q 012876 300 SGYDPCAE---DYVMKFFNREDVQRALHANITKLSYPYTTCSGVISKWNDSAETVLPIIQKLLNAGLRIWVYSGDTDGRV 376 (454)
Q Consensus 300 ~~~~pc~~---~~~~~ylN~~~V~~aL~v~~~~~~~~~~~cs~~v~~~~~~~~~~~~~l~~lL~~~~rVliy~Gd~D~i~ 376 (454)
....+|.. ..+..|||+++||+||||+... ...|..|+..+ .+.....++++.+..+|.+++|||||+||.|++|
T Consensus 288 ~~~~~c~~~~~~~~~~ylN~~~V~~aL~v~~~~-~~~w~~~~~~~-~~~~d~~~~~~~~~~~l~~girVLiY~GD~D~ic 365 (437)
T PLN02209 288 HISPDCYYYPYHLVECWANNESVREALHVDKGS-IGEWIRDHRGI-PYKSDIRSSIPYHMNNSINGYRSLIFSGDHDITM 365 (437)
T ss_pred cCCCCcccccHHHHHHHhCCHHHHHHhCCCCCC-CCCCccccchh-hcccchhhhHHHHHHHHhcCceEEEEECCccccC
Confidence 01124532 3578999999999999998531 23699998765 2332233445555566667999999999999999
Q ss_pred CchHHHHHHHHcCCCCccceeeceeCCeEeEEEEEeecC-eEEEEEcCCccccccCChHHHHHHHHHHHcCCCC
Q 012876 377 PVTSTRYSINKMGLKIKEEWRAWFHKHQVAGWVETYEKG-LTLVTVRGAGHQVPAFAPAQSLSLFTKFLSAATL 449 (454)
Q Consensus 377 ~~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~Gy~~~~~~~-Ltf~~V~gAGHmvP~dqP~~a~~~i~~fl~~~~~ 449 (454)
|+.|+++|+++|+|++.++|++|+.+++++||+|+|+ | |||++|+||||||| +||++|++||++|+.+++|
T Consensus 366 n~~Gte~wi~~L~w~~~~~~~~w~~~~q~aG~vk~y~-n~Ltfv~V~~AGHmVp-~qP~~al~m~~~fi~~~~l 437 (437)
T PLN02209 366 PFQATQAWIKSLNYSIIDDWRPWMIKGQIAGYTRTYS-NKMTFATVKGGGHTAE-YLPEESSIMFQRWISGQPL 437 (437)
T ss_pred CcHhHHHHHHhcCCccCCCeeeeEECCEeeeEEEEeC-CceEEEEEcCCCCCcC-cCHHHHHHHHHHHHcCCCC
Confidence 9999999999999999999999999999999999999 6 99999999999998 7999999999999999865
No 3
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=100.00 E-value=5.1e-98 Score=757.65 Aligned_cols=384 Identities=30% Similarity=0.596 Sum_probs=330.8
Q ss_pred cCcceecCCCCC-CCCceeEEEeEEecCCCCceeEEEEEEecCCCCCCCeEEEeCCCCCchhhchhhhhhcCCeEEcCC-
Q 012876 35 DADRVRDLPGQP-KVEFKHYAGYVKLRPNDHKALFYWFFEAQKGVSSKPLVLWLNGGPGCSSIAYGAAQELGPFLVGGN- 112 (454)
Q Consensus 35 ~~~~v~~lpg~~-~~~~~~~sGyl~v~~~~~~~lfy~f~es~~~~~~~PlilWlnGGPG~SS~~~g~f~E~GP~~~~~~- 112 (454)
+.+.|++|||+. .+++++||||++|+++.+++||||||||+++|+++||||||||||||||| .|+|.|+|||+++.+
T Consensus 19 ~~~~v~~lpg~~~~~~~~~~sGy~~v~~~~~~~lfy~f~es~~~~~~~P~~lWlnGGPG~SS~-~g~~~e~GP~~~~~~~ 97 (433)
T PLN03016 19 SASIVKFLPGFEGPLPFELETGYIGIGEDENVQFFYYFIKSENNPKEDPLLIWLNGGPGCSCL-GGIIFENGPVGLKFEV 97 (433)
T ss_pred ccCeeecCcCCCCCCCeeEEEEEEEecCCCCeEEEEEEEecCCCcccCCEEEEEcCCCcHHHH-HHHHHhcCCceeeccc
Confidence 346799999985 58899999999998766789999999999999999999999999999999 699999999998643
Q ss_pred ----CCcccccCCCcccccceEEEeCCCccCCCCcCCCCCCcccChHHhHHHHHHHHHHHHHHCCCCCCCCeEEEccccc
Q 012876 113 ----GSRLKFNKYSWNKAANMLFLEAPVGVGFSYTNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYA 188 (454)
Q Consensus 113 ----~~~l~~N~~sW~~~anvlyIDqPvGtGfSy~~~~~~~~~~~~~~~A~~~~~fL~~f~~~fp~~~~~~~yI~GESYg 188 (454)
+.++++||+||++.|||||||||+||||||+.++..+. +++++|+++++||+.||++||+|+++||||+|||||
T Consensus 98 ~~~~~~~l~~n~~sW~~~anllfiDqPvGtGfSy~~~~~~~~--~d~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYa 175 (433)
T PLN03016 98 FNGSAPSLFSTTYSWTKMANIIFLDQPVGSGFSYSKTPIDKT--GDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYS 175 (433)
T ss_pred cCCCCCceeeCCCchhhcCcEEEecCCCCCCccCCCCCCCcc--CCHHHHHHHHHHHHHHHHhChhhcCCCEEEEccCcc
Confidence 24799999999999999999999999999987665543 566778999999999999999999999999999999
Q ss_pred c-------------------cccCcceeeeecccccCCCccchhHHHhhhcccCCHHHHHHHHHhcccCC---CCChhhH
Q 012876 189 D-------------------SFINLKGFMIGNAVINDPTDTKGLVDYAWSHAIISDKLYKDISKECDFGQ---SMIRSNC 246 (454)
Q Consensus 189 G-------------------~~inLkGi~iGng~~~p~~~~~s~~~f~~~~gli~~~~~~~l~~~c~~~~---~~~~~~c 246 (454)
| .+||||||+||||+++|..|..++.+|+|.||+|++++++.+++.|.... ......|
T Consensus 176 G~yvP~la~~i~~~n~~~~~~~inLkGi~iGNg~t~~~~~~~~~~~y~~~~glI~~~~~~~i~~~c~~~~~~~~~~~~~C 255 (433)
T PLN03016 176 GMIVPALVQEISQGNYICCEPPINLQGYMLGNPVTYMDFEQNFRIPYAYGMGLISDEIYEPMKRICNGNYYNVDPSNTQC 255 (433)
T ss_pred ceehHHHHHHHHhhcccccCCcccceeeEecCCCcCchhhhhhHHHHHHhcCCCCHHHHHHHHHHhccccccCCCchHHH
Confidence 9 25899999999999999999999999999999999999999999997421 2346789
Q ss_pred HHHHHHHHHHcCCCCcccCCcccccCCCCCCCCCccccCCcccccccccCCCCCCCCCCch---hHHHhhhCcHHHHhHc
Q 012876 247 NDHIRGFVEAYAEIDIYSIYSPVCLDSLDGKAPPKLMVAPHLLTQHDLWHRLPSGYDPCAE---DYVMKFFNREDVQRAL 323 (454)
Q Consensus 247 ~~~~~~~~~~~g~in~y~i~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pc~~---~~~~~ylN~~~V~~aL 323 (454)
.+++..+....+.+|.||++.+.|.... . ...+|.. ..+..|||+++||+||
T Consensus 256 ~~~~~~~~~~~~~~n~yni~~~~~~~~~-------~------------------~~~~c~~~~~~~~~~ylN~~~V~~aL 310 (433)
T PLN03016 256 LKLTEEYHKCTAKINIHHILTPDCDVTN-------V------------------TSPDCYYYPYHLIECWANDESVREAL 310 (433)
T ss_pred HHHHHHHHHHhcCCChhhccCCcccccc-------c------------------CCCcccccchHHHHHHhCCHHHHHHh
Confidence 9988887777788999999977663110 0 0124542 3578999999999999
Q ss_pred ccCccCCCcCcccccccccccccCCCCHHHHHHHHHhcCCeEEEEecCCCcccCchHHHHHHHHcCCCCccceeeceeCC
Q 012876 324 HANITKLSYPYTTCSGVISKWNDSAETVLPIIQKLLNAGLRIWVYSGDTDGRVPVTSTRYSINKMGLKIKEEWRAWFHKH 403 (454)
Q Consensus 324 ~v~~~~~~~~~~~cs~~v~~~~~~~~~~~~~l~~lL~~~~rVliy~Gd~D~i~~~~Gt~~~i~~L~w~~~~~~~~w~~~~ 403 (454)
||+... ..+|..||..|. +.....++++.+..++.+++|||||+||.|++||+.|+++|+++|+|++.++|++|+.++
T Consensus 311 ~v~~~~-~~~w~~cn~~v~-~~~d~~~~~~~~~~~l~~~irVLiY~Gd~D~icn~~Gt~~wi~~L~w~~~~~~~~w~~~~ 388 (433)
T PLN03016 311 HIEKGS-KGKWARCNRTIP-YNHDIVSSIPYHMNNSISGYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINN 388 (433)
T ss_pred CCCCCC-CCCCccCCcccc-cccccchhhHHHHHHHhcCceEEEEECCccccCCcHhHHHHHHhCCCCCCCCcccccCCC
Confidence 998531 237999998883 222222455555666667999999999999999999999999999999999999999999
Q ss_pred eEeEEEEEeecCeEEEEEcCCccccccCChHHHHHHHHHHHcCCCC
Q 012876 404 QVAGWVETYEKGLTLVTVRGAGHQVPAFAPAQSLSLFTKFLSAATL 449 (454)
Q Consensus 404 ~~~Gy~~~~~~~Ltf~~V~gAGHmvP~dqP~~a~~~i~~fl~~~~~ 449 (454)
+++||+++|+++|||++|++|||||| +||++|++||++||.+++|
T Consensus 389 ~~~G~vk~y~n~ltfv~V~~AGHmVp-~qP~~al~m~~~Fi~~~~l 433 (433)
T PLN03016 389 QIAGYTRAYSNKMTFATIKAGGHTAE-YRPNETFIMFQRWISGQPL 433 (433)
T ss_pred EeeeEEEEeCCceEEEEEcCCCCCCC-CCHHHHHHHHHHHHcCCCC
Confidence 99999999983599999999999998 7999999999999999865
No 4
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=100.00 E-value=7.3e-97 Score=757.37 Aligned_cols=381 Identities=38% Similarity=0.726 Sum_probs=312.9
Q ss_pred CCCC-CCCceeEEEeEEecCCCCceeEEEEEEecCCCCCCCeEEEeCCCCCchhhchhhhhhcCCeEEcCC-CCcccccC
Q 012876 43 PGQP-KVEFKHYAGYVKLRPNDHKALFYWFFEAQKGVSSKPLVLWLNGGPGCSSIAYGAAQELGPFLVGGN-GSRLKFNK 120 (454)
Q Consensus 43 pg~~-~~~~~~~sGyl~v~~~~~~~lfy~f~es~~~~~~~PlilWlnGGPG~SS~~~g~f~E~GP~~~~~~-~~~l~~N~ 120 (454)
||+. .+++++|||||+|+++.+++||||||||+++|+++||||||||||||||| +|+|.|+|||+++.+ ..++++||
T Consensus 1 pg~~~~~~~~~~sGyl~~~~~~~~~lfyw~~~s~~~~~~~Pl~~wlnGGPG~SS~-~g~f~e~GP~~~~~~~~~~l~~n~ 79 (415)
T PF00450_consen 1 PGLDEPVPFKQYSGYLPVNDNENAHLFYWFFESRNDPEDDPLILWLNGGPGCSSM-WGLFGENGPFRINPDGPYTLEDNP 79 (415)
T ss_dssp TT-SS-SSSEEEEEEEEECTTTTEEEEEEEEE-SSGGCSS-EEEEEE-TTTB-TH-HHHHCTTSSEEEETTSTSEEEE-T
T ss_pred CCCCCCCCceEEEEEEecCCCCCcEEEEEEEEeCCCCCCccEEEEecCCceeccc-cccccccCceEEeecccccccccc
Confidence 6776 47899999999999777899999999999999999999999999999999 699999999999954 36899999
Q ss_pred CCcccccceEEEeCCCccCCCCcCCCCCCcccChHHhHHHHHHHHHHHHHHCCCCCCCCeEEEcccccc-----------
Q 012876 121 YSWNKAANMLFLEAPVGVGFSYTNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAD----------- 189 (454)
Q Consensus 121 ~sW~~~anvlyIDqPvGtGfSy~~~~~~~~~~~~~~~A~~~~~fL~~f~~~fp~~~~~~~yI~GESYgG----------- 189 (454)
+||++.+|||||||||||||||+.+...+.+ +++++|+++++||+.||.+||+++++||||+||||||
T Consensus 80 ~sW~~~an~l~iD~PvGtGfS~~~~~~~~~~-~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i~ 158 (415)
T PF00450_consen 80 YSWNKFANLLFIDQPVGTGFSYGNDPSDYVW-NDDQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYIL 158 (415)
T ss_dssp T-GGGTSEEEEE--STTSTT-EESSGGGGS--SHHHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHHH
T ss_pred cccccccceEEEeecCceEEeeccccccccc-hhhHHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhhh
Confidence 9999999999999999999999988776655 8999999999999999999999999999999999999
Q ss_pred --------cccCcceeeeecccccCCCccchhHHHhhhcccCCHHHHHHHHHhcccC--CCCChhhHHHHHHHHHH----
Q 012876 190 --------SFINLKGFMIGNAVINDPTDTKGLVDYAWSHAIISDKLYKDISKECDFG--QSMIRSNCNDHIRGFVE---- 255 (454)
Q Consensus 190 --------~~inLkGi~iGng~~~p~~~~~s~~~f~~~~gli~~~~~~~l~~~c~~~--~~~~~~~c~~~~~~~~~---- 255 (454)
..||||||+||||+++|..|..++.+|++.||+|+++.++.+.+.|... .......|.++.+.+..
T Consensus 159 ~~~~~~~~~~inLkGi~IGng~~dp~~~~~s~~~~~~~~gli~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~ 238 (415)
T PF00450_consen 159 QQNKKGDQPKINLKGIAIGNGWIDPRIQYNSYADYAYYHGLIDDQQYDDLNKACEACPQCQKAITECAAALDELSCQYAI 238 (415)
T ss_dssp HHTCC--STTSEEEEEEEESE-SBHHHHHHHHHHHHHHTTSS-HHHHHHHHHHHTTSHSSSCCHHHHHHHHHHHHHHCHH
T ss_pred hccccccccccccccceecCccccccccceeecccccccCcccHHHHHHHHHHhhccccccchhhHHHHHHHhhhhhccc
Confidence 2799999999999999999999999999999999999999999988643 23456789988887765
Q ss_pred --HcCCCCcccCCcccccCCCCCCCCCccccCCcccccccccCCCCCCCCCCchhHHHhhhCcHHHHhHcccCccCCCcC
Q 012876 256 --AYAEIDIYSIYSPVCLDSLDGKAPPKLMVAPHLLTQHDLWHRLPSGYDPCAEDYVMKFFNREDVQRALHANITKLSYP 333 (454)
Q Consensus 256 --~~g~in~y~i~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pc~~~~~~~ylN~~~V~~aL~v~~~~~~~~ 333 (454)
..+++|+||++.++|.... . ........+++....+..|||+++||+||||+.. ...+
T Consensus 239 ~~~~~~~n~Ydi~~~~~~~~~-~------------------~~~~~~~~~~~~~~~~~~yln~~~Vr~aL~v~~~-~~~~ 298 (415)
T PF00450_consen 239 SQCNGGINPYDIRQPCYNPSR-S------------------SYDNSPSNDPPDDDYLEAYLNRPDVREALHVPVD-SNVN 298 (415)
T ss_dssp HHHHTTSETTSTTSEETT-SH-C------------------TTCCCCTTTTTCHHHHHHHHTSHHHHHHTT-STT-TSSS
T ss_pred ccccCCcceeeeecccccccc-c------------------cccccccccccchhhHHHHhccHHHHHhhCCCcc-cCCc
Confidence 3479999999997443100 0 0000112234455688999999999999999721 1348
Q ss_pred cccccccc-c--ccccCCCCHHHHHHHHHhcCCeEEEEecCCCcccCchHHHHHHHHcCCCCccceeecee--CCeEeEE
Q 012876 334 YTTCSGVI-S--KWNDSAETVLPIIQKLLNAGLRIWVYSGDTDGRVPVTSTRYSINKMGLKIKEEWRAWFH--KHQVAGW 408 (454)
Q Consensus 334 ~~~cs~~v-~--~~~~~~~~~~~~l~~lL~~~~rVliy~Gd~D~i~~~~Gt~~~i~~L~w~~~~~~~~w~~--~~~~~Gy 408 (454)
|..|+..| . ...+.+.++.+.++.||++++|||||+||+|++||+.|+++||++|+|++.++|++|.. +++++||
T Consensus 299 w~~~~~~V~~~~~~~d~~~~~~~~l~~lL~~~irVLiy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~f~~~~~~~~~~~~G~ 378 (415)
T PF00450_consen 299 WQSCNDAVNFNWLYDDFMPSSIPDLPELLDNGIRVLIYNGDLDLICNFLGTERWIDNLNWSGKDGFRQWPRKVNGQVAGY 378 (415)
T ss_dssp --SB-HHHHHHCCTCCC-SBCHHHHHHHHHTT-EEEEEEETT-SSS-HHHHHHHHHCTECTEEEEEEEEEEETTCSEEEE
T ss_pred ccccCcccccccccccccccchhhhhhhhhccceeEEeccCCCEEEEeccchhhhhccccCcccccccccccccccccce
Confidence 99999988 3 24477889999999999999999999999999999999999999999999999999977 8999999
Q ss_pred EEEeecCeEEEEEcCCccccccCChHHHHHHHHHHHcC
Q 012876 409 VETYEKGLTLVTVRGAGHQVPAFAPAQSLSLFTKFLSA 446 (454)
Q Consensus 409 ~~~~~~~Ltf~~V~gAGHmvP~dqP~~a~~~i~~fl~~ 446 (454)
+|+++ ||||++|+|||||||+|||+++++||++||.|
T Consensus 379 ~k~~~-~ltf~~V~~AGHmvP~dqP~~a~~m~~~fl~g 415 (415)
T PF00450_consen 379 VKQYG-NLTFVTVRGAGHMVPQDQPEAALQMFRRFLKG 415 (415)
T ss_dssp EEEET-TEEEEEETT--SSHHHHSHHHHHHHHHHHHCT
T ss_pred eEEec-cEEEEEEcCCcccChhhCHHHHHHHHHHHhcC
Confidence 99999 99999999999999999999999999999986
No 5
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=100.00 E-value=6.4e-91 Score=714.33 Aligned_cols=365 Identities=28% Similarity=0.570 Sum_probs=315.3
Q ss_pred CCCceeEEEeEEecC-CCCceeEEEEEEecCCCCCCCeEEEeCCCCCchhhchhhhhhcCCeEEcCCCCcccccCCCccc
Q 012876 47 KVEFKHYAGYVKLRP-NDHKALFYWFFEAQKGVSSKPLVLWLNGGPGCSSIAYGAAQELGPFLVGGNGSRLKFNKYSWNK 125 (454)
Q Consensus 47 ~~~~~~~sGyl~v~~-~~~~~lfy~f~es~~~~~~~PlilWlnGGPG~SS~~~g~f~E~GP~~~~~~~~~l~~N~~sW~~ 125 (454)
+.++++|||||+|++ ..+++||||||||+++|+++||||||||||||||| +|+|.|+|||+++.++.+++.||+||++
T Consensus 42 ~~~~~~~sGy~~v~~~~~~~~lFyw~~~s~~~~~~~Pl~lwlnGGPG~ss~-~G~f~E~GP~~i~~~~~~~~~n~~sW~~ 120 (462)
T PTZ00472 42 DPSVNQWSGYFDIPGNQTDKHYFYWAFGPRNGNPEAPVLLWMTGGPGCSSM-FALLAENGPCLMNETTGDIYNNTYSWNN 120 (462)
T ss_pred CCCCcceeEEEEeCCCCCCceEEEEEEEcCCCCCCCCEEEEECCCCcHHHH-HhhhccCCCeEEeCCCCceeECCccccc
Confidence 567889999999975 44789999999999999999999999999999999 6999999999999987789999999999
Q ss_pred ccceEEEeCCCccCCCCcCCCCCCcccChHHhHHHHHHHHHHHHHHCCCCCCCCeEEEcccccc----------------
Q 012876 126 AANMLFLEAPVGVGFSYTNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAD---------------- 189 (454)
Q Consensus 126 ~anvlyIDqPvGtGfSy~~~~~~~~~~~~~~~A~~~~~fL~~f~~~fp~~~~~~~yI~GESYgG---------------- 189 (454)
.+||||||||+||||||+... ++.. +++++|+|+++||+.|+++||+++++|+||+||||||
T Consensus 121 ~~~~l~iDqP~G~G~S~~~~~-~~~~-~~~~~a~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~i~~~n~~ 198 (462)
T PTZ00472 121 EAYVIYVDQPAGVGFSYADKA-DYDH-NESEVSEDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYRINMGNKK 198 (462)
T ss_pred ccCeEEEeCCCCcCcccCCCC-CCCC-ChHHHHHHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHHHHhhccc
Confidence 999999999999999998754 3443 7889999999999999999999999999999999999
Q ss_pred ---cccCcceeeeecccccCCCccchhHHHhhh-------cccCCHHHHHHHHH---hc-------ccCCCCChhhHHHH
Q 012876 190 ---SFINLKGFMIGNAVINDPTDTKGLVDYAWS-------HAIISDKLYKDISK---EC-------DFGQSMIRSNCNDH 249 (454)
Q Consensus 190 ---~~inLkGi~iGng~~~p~~~~~s~~~f~~~-------~gli~~~~~~~l~~---~c-------~~~~~~~~~~c~~~ 249 (454)
.+||||||+|||||+||..|..++.+|+|. +++|++++++++++ .| ..........|..+
T Consensus 199 ~~~~~inLkGi~IGNg~~dp~~q~~~~~~~a~~~~~~~~~~~li~~~~~~~~~~~~~~c~~~~~~c~~~~~~~~~~c~~a 278 (462)
T PTZ00472 199 GDGLYINLAGLAVGNGLTDPYTQYASYPRLAWDWCKEKLGAPCVSEEAYDEMSSMVPACQKKIKECNSNPDDADSSCSVA 278 (462)
T ss_pred cCCceeeeEEEEEeccccChhhhcccHHHHhhhcccccCCCCccCHHHHHHHHHHHHHHHHHHHhccccCCCcchHHHHH
Confidence 259999999999999999999999999996 58999999888764 34 22111123346444
Q ss_pred HHHHHH-----HcCCCCcccCCcccccCCCCCCCCCccccCCcccccccccCCCCCCCCCCch-hHHHhhhCcHHHHhHc
Q 012876 250 IRGFVE-----AYAEIDIYSIYSPVCLDSLDGKAPPKLMVAPHLLTQHDLWHRLPSGYDPCAE-DYVMKFFNREDVQRAL 323 (454)
Q Consensus 250 ~~~~~~-----~~g~in~y~i~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pc~~-~~~~~ylN~~~V~~aL 323 (454)
...|.. ..+++|+||++.+ |.. ++|.. ..+..|||+++||+||
T Consensus 279 ~~~c~~~~~~~~~~g~n~Ydi~~~-c~~------------------------------~~c~~~~~~~~yLN~~~Vq~AL 327 (462)
T PTZ00472 279 RALCNEYIAVYSATGLNNYDIRKP-CIG------------------------------PLCYNMDNTIAFMNREDVQSSL 327 (462)
T ss_pred HHHHHHHHHHHHhcCCChhheecc-CCC------------------------------CCccCHHHHHHHhCCHHHHHHh
Confidence 333321 1357899999975 531 24543 4678999999999999
Q ss_pred ccCccCCCcCcccccccc-cccc-cCCCCHHHHHHHHHhcCCeEEEEecCCCcccCchHHHHHHHHcCCCCcc-----ce
Q 012876 324 HANITKLSYPYTTCSGVI-SKWN-DSAETVLPIIQKLLNAGLRIWVYSGDTDGRVPVTSTRYSINKMGLKIKE-----EW 396 (454)
Q Consensus 324 ~v~~~~~~~~~~~cs~~v-~~~~-~~~~~~~~~l~~lL~~~~rVliy~Gd~D~i~~~~Gt~~~i~~L~w~~~~-----~~ 396 (454)
||+. .+|+.|+..| ..+. |.+.++.+.++.||++++|||||+||.|++||+.|+++|+++|+|++.+ +|
T Consensus 328 ~v~~----~~w~~c~~~V~~~~~~D~~~~~~~~l~~LL~~gikVLiYnGd~D~icn~~Gt~~wi~~L~w~g~~~f~~a~~ 403 (462)
T PTZ00472 328 GVKP----ATWQSCNMEVNLMFEMDWMKNFNYTVPGLLEDGVRVMIYAGDMDFICNWIGNKAWTLALQWPGNAEFNAAPD 403 (462)
T ss_pred CCCC----CCceeCCHHHHHHhhhccccchHHHHHHHHhcCceEEEEECCcCeecCcHhHHHHHHhCCCCCccchhhcCc
Confidence 9985 2799999999 5554 6778888999999999999999999999999999999999999999976 45
Q ss_pred eec-eeCCeEeEEEEEeec----CeEEEEEcCCccccccCChHHHHHHHHHHHcCCCC
Q 012876 397 RAW-FHKHQVAGWVETYEK----GLTLVTVRGAGHQVPAFAPAQSLSLFTKFLSAATL 449 (454)
Q Consensus 397 ~~w-~~~~~~~Gy~~~~~~----~Ltf~~V~gAGHmvP~dqP~~a~~~i~~fl~~~~~ 449 (454)
++| +.+++++||+|++++ +|+|++|++||||||.|||+++++||++|+.++++
T Consensus 404 ~~w~~~~~~v~G~vk~~~~~~~~~l~~~~V~~AGH~vp~d~P~~~~~~i~~fl~~~~~ 461 (462)
T PTZ00472 404 VPFSAVDGRWAGLVRSAASNTSSGFSFVQVYNAGHMVPMDQPAVALTMINRFLRNRPL 461 (462)
T ss_pred cccEecCCEeceEEEEEecccCCCeEEEEECCCCccChhhHHHHHHHHHHHHHcCCCC
Confidence 789 568899999999963 79999999999999999999999999999999876
No 6
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=100.00 E-value=1.8e-68 Score=525.95 Aligned_cols=294 Identities=28% Similarity=0.560 Sum_probs=247.4
Q ss_pred ccceEEEeCCCccCCCCcCCCCCCcccChHHhHHHHHHHHHHHHHHCCCCCCCCeEEEcccccc----------------
Q 012876 126 AANMLFLEAPVGVGFSYTNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAD---------------- 189 (454)
Q Consensus 126 ~anvlyIDqPvGtGfSy~~~~~~~~~~~~~~~A~~~~~fL~~f~~~fp~~~~~~~yI~GESYgG---------------- 189 (454)
.|||||||||+||||||++++..+. +++++|+|++.||+.||++||+|+++||||+||||||
T Consensus 1 ~aNvLfiDqPvGvGfSy~~~~~~~~--~d~~~a~d~~~fL~~Ff~~~p~~~~~~fyI~GESYaG~YiP~la~~I~~~n~~ 78 (319)
T PLN02213 1 MANIIFLDQPVGSGFSYSKTPIDKT--GDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYI 78 (319)
T ss_pred CccEEEecCCCCCCCCCCCCCCCcc--ccHHHHHHHHHHHHHHHHhCcccccCCeEEEeeccccchHHHHHHHHHhhccc
Confidence 4899999999999999987665543 5667779999999999999999999999999999999
Q ss_pred ---cccCcceeeeecccccCCCccchhHHHhhhcccCCHHHHHHHHHhcccCC---CCChhhHHHHHHHHHHHcCCCCcc
Q 012876 190 ---SFINLKGFMIGNAVINDPTDTKGLVDYAWSHAIISDKLYKDISKECDFGQ---SMIRSNCNDHIRGFVEAYAEIDIY 263 (454)
Q Consensus 190 ---~~inLkGi~iGng~~~p~~~~~s~~~f~~~~gli~~~~~~~l~~~c~~~~---~~~~~~c~~~~~~~~~~~g~in~y 263 (454)
.+||||||+|||||++|..|..++.+|+|.||+|++++++.+++.|.... ......|.+++..+....+.+|.|
T Consensus 79 ~~~~~inLkGi~IGNg~t~~~~~~~~~~~~~~~~gli~~~~~~~~~~~c~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~ 158 (319)
T PLN02213 79 CCEPPINLQGYMLGNPVTYMDFEQNFRIPYAYGMGLISDEIYEPMKRICNGNYYNVDPSNTQCLKLTEEYHKCTAKINIH 158 (319)
T ss_pred ccCCceeeeEEEeCCCCCCccccchhHhhHHHhcCCCCHHHHHHHHHhcCCCccCCCCCcHHHHHHHHHHHHHHhcCCHh
Confidence 25899999999999999999999999999999999999999999997421 124567998888777777889999
Q ss_pred cCCcccccCCCCCCCCCccccCCcccccccccCCCCCCCCCCch---hHHHhhhCcHHHHhHcccCccCCCcCccccccc
Q 012876 264 SIYSPVCLDSLDGKAPPKLMVAPHLLTQHDLWHRLPSGYDPCAE---DYVMKFFNREDVQRALHANITKLSYPYTTCSGV 340 (454)
Q Consensus 264 ~i~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pc~~---~~~~~ylN~~~V~~aL~v~~~~~~~~~~~cs~~ 340 (454)
+++.+.|.... . ...+|.. ..+..|||+++||+||||+... ..+|..||..
T Consensus 159 ~~~~~~~~~~~-------~------------------~~~~c~~~~~~~~~~ylN~~~V~~aL~v~~~~-~~~w~~c~~~ 212 (319)
T PLN02213 159 HILTPDCDVTN-------V------------------TSPDCYYYPYHLIECWANDESVREALHIEKGS-KGKWARCNRT 212 (319)
T ss_pred hcccCcccCcc-------C------------------CCCCcccchhHHHHHHhCCHHHHHHhCcCCCC-CCCCccCCcc
Confidence 99866563110 0 0124542 3678999999999999997521 2379999998
Q ss_pred ccccccCCCCHHHHHHHHHhcCCeEEEEecCCCcccCchHHHHHHHHcCCCCccceeeceeCCeEeEEEEEeecCeEEEE
Q 012876 341 ISKWNDSAETVLPIIQKLLNAGLRIWVYSGDTDGRVPVTSTRYSINKMGLKIKEEWRAWFHKHQVAGWVETYEKGLTLVT 420 (454)
Q Consensus 341 v~~~~~~~~~~~~~l~~lL~~~~rVliy~Gd~D~i~~~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~Gy~~~~~~~Ltf~~ 420 (454)
|. +.....+..+.+..+|.+++|||||+||.|++||+.|+++|+++|+|++.++|++|+.+++++||+|+|+++|||++
T Consensus 213 v~-~~~d~~~~~~~~~~~l~~~i~VliY~Gd~D~icn~~g~~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~~~ltf~~ 291 (319)
T PLN02213 213 IP-YNHDIVSSIPYHMNNSISGYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFAT 291 (319)
T ss_pred cc-cccccccchHHHHHHHhcCceEEEEECCcCeeCCcHhHHHHHHhcCCCCCCCCccccCCCEeeeEEEEecCcceEEE
Confidence 83 22222344555555666789999999999999999999999999999999999999999999999999983499999
Q ss_pred EcCCccccccCChHHHHHHHHHHHcCCCC
Q 012876 421 VRGAGHQVPAFAPAQSLSLFTKFLSAATL 449 (454)
Q Consensus 421 V~gAGHmvP~dqP~~a~~~i~~fl~~~~~ 449 (454)
|+||||||| +||+++++||++||.++++
T Consensus 292 V~~AGHmV~-~qP~~al~m~~~fi~~~~~ 319 (319)
T PLN02213 292 IKAGGHTAE-YRPNETFIMFQRWISGQPL 319 (319)
T ss_pred EcCCCCCCC-cCHHHHHHHHHHHHcCCCC
Confidence 999999998 7999999999999999864
No 7
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=100.00 E-value=6.4e-65 Score=503.55 Aligned_cols=363 Identities=25% Similarity=0.426 Sum_probs=290.4
Q ss_pred ceeEEEeEEecCCCC-----ceeEEEEEEecCCCCCCCeEEEeCCCCCchhhchhhhhhcCCeEEcCCCCccc--ccCCC
Q 012876 50 FKHYAGYVKLRPNDH-----KALFYWFFEAQKGVSSKPLVLWLNGGPGCSSIAYGAAQELGPFLVGGNGSRLK--FNKYS 122 (454)
Q Consensus 50 ~~~~sGyl~v~~~~~-----~~lfy~f~es~~~~~~~PlilWlnGGPG~SS~~~g~f~E~GP~~~~~~~~~l~--~N~~s 122 (454)
++.++|-++|.+..+ ..+|||+||+.++|+++|+||||||||||||+ +|+|+|+||++|+.+. +.. .||+|
T Consensus 65 ~~~~~G~lpv~~~~g~~d~ed~~ffy~fe~~ndp~~rPvi~wlNGGPGcSS~-~g~l~elGP~rI~~~~-~P~~~~NP~S 142 (498)
T COG2939 65 YPATAGILPVRDYTGYPDAEDFFFFYTFESPNDPANRPVIFWLNGGPGCSSV-TGLLGELGPKRIQSGT-SPSYPDNPGS 142 (498)
T ss_pred cchhccccchhhccCCcccceeEEEEEecCCCCCCCCceEEEecCCCChHhh-hhhhhhcCCeeeeCCC-CCCCCCCccc
Confidence 445555555543221 24899999999999999999999999999999 7999999999999984 334 59999
Q ss_pred cccccceEEEeCCCccCCCCcCCCCCCcccChHHhHHHHHHHHHHHHHHCCCCCCC--CeEEEcccccc-----------
Q 012876 123 WNKAANMLFLEAPVGVGFSYTNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSH--DFYIAGESYAD----------- 189 (454)
Q Consensus 123 W~~~anvlyIDqPvGtGfSy~~~~~~~~~~~~~~~A~~~~~fL~~f~~~fp~~~~~--~~yI~GESYgG----------- 189 (454)
|++++||||||||+|||||++. ..+..+ +...+.+|++.|++.|++.||++.+. |+||+||||||
T Consensus 143 W~~~adLvFiDqPvGTGfS~a~-~~e~~~-d~~~~~~D~~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~L~ 220 (498)
T COG2939 143 WLDFADLVFIDQPVGTGFSRAL-GDEKKK-DFEGAGKDVYSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHELL 220 (498)
T ss_pred cccCCceEEEecCcccCccccc-cccccc-chhccchhHHHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHHHHH
Confidence 9999999999999999999973 223333 77889999999999999999999887 99999999999
Q ss_pred -------cccCcceeeeecc-cccCCCccchhHHHhhhc----ccCCHHHHHHHHHhcccCC----------CCChhhHH
Q 012876 190 -------SFINLKGFMIGNA-VINDPTDTKGLVDYAWSH----AIISDKLYKDISKECDFGQ----------SMIRSNCN 247 (454)
Q Consensus 190 -------~~inLkGi~iGng-~~~p~~~~~s~~~f~~~~----gli~~~~~~~l~~~c~~~~----------~~~~~~c~ 247 (454)
..+||++++|||| +|+|..++.+|.+++... +.++.+.++++++.|+... ......|.
T Consensus 221 ~~~~~~~~~~nlssvligng~~t~Pl~~~~~y~~~a~~~~~~~~~l~~e~~~~~~~~~~~d~~~~l~~g~~~~~~~~~c~ 300 (498)
T COG2939 221 EDNIALNGNVNLSSVLIGNGLWTDPLTQYLTYEPIAAEKGPYDGVLSSEECTKAEKYCAGDYCLALMKGCYDSGSLQPCE 300 (498)
T ss_pred HhccccCCceEeeeeeecCCcccChhHHHHHhhhhHhhcCCCCCcCcHHHHHHHHHHhhhhhHhhhccCCCCchhhhHHH
Confidence 3589999999999 999999999999998754 4566777888888776421 22345677
Q ss_pred HHHHHHHHHc------CC---CCcccCCcccccCCCCCCCCCccccCCcccccccccCCCCCCCCCCch--hHHHhhhCc
Q 012876 248 DHIRGFVEAY------AE---IDIYSIYSPVCLDSLDGKAPPKLMVAPHLLTQHDLWHRLPSGYDPCAE--DYVMKFFNR 316 (454)
Q Consensus 248 ~~~~~~~~~~------g~---in~y~i~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pc~~--~~~~~ylN~ 316 (454)
.+...+.... .+ .|+|+++.. |...... .-|++ ....+|++.
T Consensus 301 ~~~~~~~~~~~~~~~r~~~~~~n~y~~r~~-~~d~g~~--------------------------~~~y~~~~~~ld~~~~ 353 (498)
T COG2939 301 NASAYLTGLMREYVGRAGGRLLNVYDIREE-CRDPGLG--------------------------GSCYDTLSTSLDYFNF 353 (498)
T ss_pred HHHHHHHhcchhhhccccccccccccchhh-cCCCCcc--------------------------cccccceeeccccccc
Confidence 6666554322 13 788998875 6431100 12333 245778887
Q ss_pred HHHHhHcccCccCCCcCcccccccc-cccc----cCCCCHHHHHHHHHhcCCeEEEEecCCCcccCchHHHHHHHHcCCC
Q 012876 317 EDVQRALHANITKLSYPYTTCSGVI-SKWN----DSAETVLPIIQKLLNAGLRIWVYSGDTDGRVPVTSTRYSINKMGLK 391 (454)
Q Consensus 317 ~~V~~aL~v~~~~~~~~~~~cs~~v-~~~~----~~~~~~~~~l~~lL~~~~rVliy~Gd~D~i~~~~Gt~~~i~~L~w~ 391 (454)
+.++++++.... .|..|+..+ ..|. +........+..++.+++.+++|.|+.|.+|++.|++.|..+|+|.
T Consensus 354 ~~~~~~~~~~~d----~~~~c~t~a~~~f~~~~~~~~~~~~~~~~~~lv~~~~~~~~~gd~d~icn~~~~~a~~~~Lkw~ 429 (498)
T COG2939 354 DPEQEVNDPEVD----NISGCTTDAMTDFLTFTGGWAKPSRYLVLNLLVNNVWILLYAGDKDFICNLRGNMALDPKLKWL 429 (498)
T ss_pred cchhcccccccc----chhccchHHHHhhhhhcCCcccccHHHHhhhhhcCCceeeeecCchhHhhhhhhcccCCcceEe
Confidence 788888887764 799999988 5552 4566777888888999999999999999999999999999999999
Q ss_pred Ccccee-----ecee--CCeEeEEEEEeecCeEEEEEcCCccccccCChHHHHHHHHHHHcCCC
Q 012876 392 IKEEWR-----AWFH--KHQVAGWVETYEKGLTLVTVRGAGHQVPAFAPAQSLSLFTKFLSAAT 448 (454)
Q Consensus 392 ~~~~~~-----~w~~--~~~~~Gy~~~~~~~Ltf~~V~gAGHmvP~dqP~~a~~~i~~fl~~~~ 448 (454)
+...|. +|.. ..+..|-.++++ |++|+.++.||||||+|+|+.+++|++.|+.+..
T Consensus 430 ~~~g~~d~~~~~~~~~~t~e~~~~~~s~~-n~~~~r~y~aGHMvp~d~P~~~~~~~~~~~~~~~ 492 (498)
T COG2939 430 GASGYFDASTPFFWSRLTLEEMGGYKSYR-NLTFLRIYEAGHMVPYDRPESSLEMVNLWINGYG 492 (498)
T ss_pred eecchhhhcCCCcccccchhhcccccccC-CceEEEEecCcceeecCChHHHHHHHHHHHhhcc
Confidence 988653 3322 456667777788 9999999999999999999999999999998843
No 8
>KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=4.2e-64 Score=465.38 Aligned_cols=374 Identities=26% Similarity=0.419 Sum_probs=297.4
Q ss_pred EEEeEEecCCCCceeEEEEEEecCCC-CCCCeEEEeCCCCCchhhchhhhhhcCCeEEcCCCCcccccCCCcccccceEE
Q 012876 53 YAGYVKLRPNDHKALFYWFFEAQKGV-SSKPLVLWLNGGPGCSSIAYGAAQELGPFLVGGNGSRLKFNKYSWNKAANMLF 131 (454)
Q Consensus 53 ~sGyl~v~~~~~~~lfy~f~es~~~~-~~~PlilWlnGGPG~SS~~~g~f~E~GP~~~~~~~~~l~~N~~sW~~~anvly 131 (454)
-.||++|.. +.++|+|++.+.... ..+||.|||+||||+||..+|+|.|+||...+ +++|+++|.+.|||+|
T Consensus 4 ~wg~v~vr~--~a~~F~wly~~~~~~ks~~pl~lwlqGgpGaSstG~GNFeE~GPl~~~-----~~~r~~TWlk~adllf 76 (414)
T KOG1283|consen 4 DWGYVDVRT--GAHMFWWLYYATANVKSERPLALWLQGGPGASSTGFGNFEELGPLDLD-----GSPRDWTWLKDADLLF 76 (414)
T ss_pred cccceeeec--CceEEEEEeeeccccccCCCeeEEecCCCCCCCcCccchhhcCCcccC-----CCcCCchhhhhccEEE
Confidence 369999985 689999999887544 78999999999999999999999999998766 5689999999999999
Q ss_pred EeCCCccCCCCcCCCCCCcccChHHhHHHHHHHHHHHHHHCCCCCCCCeEEEcccccc------------------cccC
Q 012876 132 LEAPVGVGFSYTNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAD------------------SFIN 193 (454)
Q Consensus 132 IDqPvGtGfSy~~~~~~~~~~~~~~~A~~~~~fL~~f~~~fp~~~~~~~yI~GESYgG------------------~~in 193 (454)
||.|||+||||.+....|.+ +++++|.|+.+.|+.||..||||+.+||||+-||||| .+.|
T Consensus 77 vDnPVGaGfSyVdg~~~Y~~-~~~qia~Dl~~llk~f~~~h~e~~t~P~~If~ESYGGKma~k~al~l~~aIk~G~i~~n 155 (414)
T KOG1283|consen 77 VDNPVGAGFSYVDGSSAYTT-NNKQIALDLVELLKGFFTNHPEFKTVPLYIFCESYGGKMAAKFALELDDAIKRGEIKLN 155 (414)
T ss_pred ecCCCcCceeeecCcccccc-cHHHHHHHHHHHHHHHHhcCccccccceEEEEhhcccchhhhhhhhHHHHHhcCceeec
Confidence 99999999999998888887 9999999999999999999999999999999999999 5789
Q ss_pred cceeeeecccccCCCccchhHHHhhhcccCCHHHHHHHHH---hcccC--C---CCChhhHHHHHHHHHHHcCCCCcccC
Q 012876 194 LKGFMIGNAVINDPTDTKGLVDYAWSHAIISDKLYKDISK---ECDFG--Q---SMIRSNCNDHIRGFVEAYAEIDIYSI 265 (454)
Q Consensus 194 LkGi~iGng~~~p~~~~~s~~~f~~~~gli~~~~~~~l~~---~c~~~--~---~~~~~~c~~~~~~~~~~~g~in~y~i 265 (454)
+.|+++|+.||+|..-..+..+|++..+++|+...+...+ .|... . .............+...+..++.|||
T Consensus 156 f~~VaLGDSWISP~D~V~SWGP~L~~~S~LDD~GLds~ns~A~k~~~~v~~g~~~~AT~~Wg~~e~li~~~sn~VdfYNi 235 (414)
T KOG1283|consen 156 FIGVALGDSWISPEDFVFSWGPLLKHVSRLDDNGLDSSNSGAEKGKGGVDGGKWGGATGGWGGGENLISRESNGVDFYNI 235 (414)
T ss_pred ceeEEccCcccChhHhhhcchHHHHhhhhhcccCccchhhhHHhhcccccCCccccccccccCcCcceeecccCcceeee
Confidence 9999999999999999999999999999999888765543 33311 0 01111111222233344568999999
Q ss_pred CcccccCCCCCCCCCccccCCcccccccccCCCCCCC-CCCchhHHHhhhCcHHHHhHcccCccCCCcCcccccccc-cc
Q 012876 266 YSPVCLDSLDGKAPPKLMVAPHLLTQHDLWHRLPSGY-DPCAEDYVMKFFNREDVQRALHANITKLSYPYTTCSGVI-SK 343 (454)
Q Consensus 266 ~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~pc~~~~~~~ylN~~~V~~aL~v~~~~~~~~~~~cs~~v-~~ 343 (454)
..+.-.+....++ ++.. ..... .++++... .+-..+.+++++|-| ||++|++.+. ...|-..+..+ -+
T Consensus 236 l~~t~~d~~~~ss-~~~~-~~~~~-----~rrl~~~~~~~~~~D~L~~lM~g~-vrkkLgIip~--~~~wGgqsg~vFt~ 305 (414)
T KOG1283|consen 236 LTKTLGDQYSLSS-RAAM-TPEEV-----MRRLLVRFVGDEDRDKLSDLMNGP-VRKKLGIIPG--GVKWGGQSGDVFTK 305 (414)
T ss_pred eccCCCcchhhhh-hhhc-chHHH-----HHHHHhccCcchhHHHHHHHhccc-ccccccccCC--CCcccCcCCchHHH
Confidence 8764322211110 0000 00000 00111011 111234688999987 9999999876 35899999888 33
Q ss_pred -cccCCCCHHHHHHHHHhcCCeEEEEecCCCcccCchHHHHHHHHcCCCCcccee--ec---eeCCeEeEEEEEeecCeE
Q 012876 344 -WNDSAETVLPIIQKLLNAGLRIWVYSGDTDGRVPVTSTRYSINKMGLKIKEEWR--AW---FHKHQVAGWVETYEKGLT 417 (454)
Q Consensus 344 -~~~~~~~~~~~l~~lL~~~~rVliy~Gd~D~i~~~~Gt~~~i~~L~w~~~~~~~--~w---~~~~~~~Gy~~~~~~~Lt 417 (454)
-.+.+.+....+.+||++|++|.||+|++|.||++.|+++|+..|.|+....+. +| +.+...+||.|.|. ||.
T Consensus 306 lq~dFMKPvi~~VdeLL~~Gv~V~VynG~lDlIc~T~G~~AWv~~l~w~~~p~f~~~~r~~~~~s~~l~gy~ktyk-nl~ 384 (414)
T KOG1283|consen 306 LQGDFMKPVISKVDELLNNGVNVTVYNGQLDLICATMGTEAWVEKLEWSAKPSFQVSPRVGITVSRVLEGYEKTYK-NLS 384 (414)
T ss_pred hhhhhcccHHHHHHHHHhCCceEEEEecccchhhcccchhhhhhheecCCCCccccceeeeccceeecchhhhhhc-cce
Confidence 348999999999999999999999999999999999999999999999988553 33 45668899999999 999
Q ss_pred EEEEcCCccccccCChHHHHHHHHHHHc
Q 012876 418 LVTVRGAGHQVPAFAPAQSLSLFTKFLS 445 (454)
Q Consensus 418 f~~V~gAGHmvP~dqP~~a~~~i~~fl~ 445 (454)
|..|..||||||.|+|+.|.+|++-+..
T Consensus 385 f~wilraghmvp~Dnp~~a~hmlr~vtk 412 (414)
T KOG1283|consen 385 FFWILRAGHMVPADNPAAASHMLRHVTK 412 (414)
T ss_pred eEEeecccCcccCCCHHHHhhheeeccc
Confidence 9999999999999999999999986653
No 9
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=99.18 E-value=5.4e-09 Score=100.13 Aligned_cols=120 Identities=23% Similarity=0.322 Sum_probs=74.9
Q ss_pred EEEeEEecCCCCceeEEEEEEecCCCCCCCeEEEeCCCCCchhhchhhhhhcCCeEEcCCCCcccccCCCcccccceEEE
Q 012876 53 YAGYVKLRPNDHKALFYWFFEAQKGVSSKPLVLWLNGGPGCSSIAYGAAQELGPFLVGGNGSRLKFNKYSWNKAANMLFL 132 (454)
Q Consensus 53 ~sGyl~v~~~~~~~lfy~f~es~~~~~~~PlilWlnGGPG~SS~~~g~f~E~GP~~~~~~~~~l~~N~~sW~~~anvlyI 132 (454)
..++++++ +..+.|.-+. .+...|.||.+.||||+++..+..+.+. +.. +-.+++.+
T Consensus 3 ~~~~~~~~---~~~~~~~~~~---~~~~~~~vl~~hG~~g~~~~~~~~~~~~-----------l~~------~g~~vi~~ 59 (288)
T TIGR01250 3 IEGIITVD---GGYHLFTKTG---GEGEKIKLLLLHGGPGMSHEYLENLREL-----------LKE------EGREVIMY 59 (288)
T ss_pred ccceecCC---CCeEEEEecc---CCCCCCeEEEEcCCCCccHHHHHHHHHH-----------HHh------cCCEEEEE
Confidence 35566664 3344444332 2234678899999999987522333221 111 13789999
Q ss_pred eCCCccCCCCcCCCCC-CcccChHHhHHHHHHHHHHHHHHCCCCCCCCeEEEcccccc---------cccCcceeeeecc
Q 012876 133 EAPVGVGFSYTNNSED-LHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAD---------SFINLKGFMIGNA 202 (454)
Q Consensus 133 DqPvGtGfSy~~~~~~-~~~~~~~~~A~~~~~fL~~f~~~fp~~~~~~~yI~GESYgG---------~~inLkGi~iGng 202 (454)
|.| |.|.|....... . ++.+..++++..++.. +..++++|.|+|+|| .+..++++++.++
T Consensus 60 d~~-G~G~s~~~~~~~~~--~~~~~~~~~~~~~~~~-------~~~~~~~liG~S~Gg~ia~~~a~~~p~~v~~lvl~~~ 129 (288)
T TIGR01250 60 DQL-GCGYSDQPDDSDEL--WTIDYFVDELEEVREK-------LGLDKFYLLGHSWGGMLAQEYALKYGQHLKGLIISSM 129 (288)
T ss_pred cCC-CCCCCCCCCccccc--ccHHHHHHHHHHHHHH-------cCCCcEEEEEeehHHHHHHHHHHhCccccceeeEecc
Confidence 976 999986533221 1 1556667776554442 234569999999999 4566899999987
Q ss_pred ccc
Q 012876 203 VIN 205 (454)
Q Consensus 203 ~~~ 205 (454)
...
T Consensus 130 ~~~ 132 (288)
T TIGR01250 130 LDS 132 (288)
T ss_pred ccc
Confidence 653
No 10
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=99.12 E-value=2.5e-09 Score=100.84 Aligned_cols=107 Identities=17% Similarity=0.184 Sum_probs=72.8
Q ss_pred EEEEEEecCCCCCCCeEEEeCCCCCchhhchhhhhhcCCeEEcCCCCcccccCCCcccccceEEEeCCCccCCCCcCCCC
Q 012876 68 FYWFFEAQKGVSSKPLVLWLNGGPGCSSIAYGAAQELGPFLVGGNGSRLKFNKYSWNKAANMLFLEAPVGVGFSYTNNSE 147 (454)
Q Consensus 68 fy~f~es~~~~~~~PlilWlnGGPG~SS~~~g~f~E~GP~~~~~~~~~l~~N~~sW~~~anvlyIDqPvGtGfSy~~~~~ 147 (454)
+|..+.. ..++.|+||++.|.+|.+.. +..+.+. + .+..+++.+|.| |.|.|......
T Consensus 2 ~~~~~~~--~~~~~~~iv~lhG~~~~~~~-~~~~~~~-----------l-------~~~~~vi~~D~~-G~G~S~~~~~~ 59 (257)
T TIGR03611 2 HYELHGP--PDADAPVVVLSSGLGGSGSY-WAPQLDV-----------L-------TQRFHVVTYDHR-GTGRSPGELPP 59 (257)
T ss_pred EEEEecC--CCCCCCEEEEEcCCCcchhH-HHHHHHH-----------H-------HhccEEEEEcCC-CCCCCCCCCcc
Confidence 4555533 23568999999999888777 5443321 1 224699999976 99999654333
Q ss_pred CCcccChHHhHHHHHHHHHHHHHHCCCCCCCCeEEEcccccc---------cccCcceeeeecccccC
Q 012876 148 DLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAD---------SFINLKGFMIGNAVIND 206 (454)
Q Consensus 148 ~~~~~~~~~~A~~~~~fL~~f~~~fp~~~~~~~yI~GESYgG---------~~inLkGi~iGng~~~p 206 (454)
.+ +.++.++++.+++... ...+++|+|+|+|| .+-.++++++.+++..+
T Consensus 60 ~~---~~~~~~~~~~~~i~~~-------~~~~~~l~G~S~Gg~~a~~~a~~~~~~v~~~i~~~~~~~~ 117 (257)
T TIGR03611 60 GY---SIAHMADDVLQLLDAL-------NIERFHFVGHALGGLIGLQLALRYPERLLSLVLINAWSRP 117 (257)
T ss_pred cC---CHHHHHHHHHHHHHHh-------CCCcEEEEEechhHHHHHHHHHHChHHhHHheeecCCCCC
Confidence 32 5666777777766532 33579999999999 23358999999887654
No 11
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=99.07 E-value=1.6e-08 Score=97.06 Aligned_cols=100 Identities=17% Similarity=0.119 Sum_probs=68.9
Q ss_pred CCCCCeEEEeCCCCCchhhchhhhhhcCCeEEcCCCCcccccCCCcccccceEEEeCCCccCCCCcCCCCCCcccChHHh
Q 012876 78 VSSKPLVLWLNGGPGCSSIAYGAAQELGPFLVGGNGSRLKFNKYSWNKAANMLFLEAPVGVGFSYTNNSEDLHKLGDQVT 157 (454)
Q Consensus 78 ~~~~PlilWlnGGPG~SS~~~g~f~E~GP~~~~~~~~~l~~N~~sW~~~anvlyIDqPvGtGfSy~~~~~~~~~~~~~~~ 157 (454)
+.+.|.||++.|.+|.+.. |.-+.+ .+. +..+++.+|.| |.|.|.......+ +-+..
T Consensus 25 ~~~~~~vv~~hG~~~~~~~-~~~~~~-----------~l~-------~~~~vi~~D~~-G~G~S~~~~~~~~---~~~~~ 81 (278)
T TIGR03056 25 PTAGPLLLLLHGTGASTHS-WRDLMP-----------PLA-------RSFRVVAPDLP-GHGFTRAPFRFRF---TLPSM 81 (278)
T ss_pred CCCCCeEEEEcCCCCCHHH-HHHHHH-----------HHh-------hCcEEEeecCC-CCCCCCCccccCC---CHHHH
Confidence 3456899999999887776 543332 121 23689999966 9998865433222 56667
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCeEEEcccccc---------cccCcceeeeecccccCC
Q 012876 158 ANDSYAFLIGWFKRFPNFKSHDFYIAGESYAD---------SFINLKGFMIGNAVINDP 207 (454)
Q Consensus 158 A~~~~~fL~~f~~~fp~~~~~~~yI~GESYgG---------~~inLkGi~iGng~~~p~ 207 (454)
++++.++++. +..++++|.|+|+|| .+..++++++.++...+.
T Consensus 82 ~~~l~~~i~~-------~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~~~ 133 (278)
T TIGR03056 82 AEDLSALCAA-------EGLSPDGVIGHSAGAAIALRLALDGPVTPRMVVGINAALMPF 133 (278)
T ss_pred HHHHHHHHHH-------cCCCCceEEEECccHHHHHHHHHhCCcccceEEEEcCccccc
Confidence 7777776653 223578999999999 344588999999876643
No 12
>PRK03204 haloalkane dehalogenase; Provisional
Probab=99.04 E-value=3.3e-08 Score=96.34 Aligned_cols=59 Identities=14% Similarity=0.038 Sum_probs=49.1
Q ss_pred CCeEEEEecCCCcccCchHH-HHHHHHcCCCCccceeeceeCCeEeEEEEEeecCeEEEEEcCCccccccCChHHHHHHH
Q 012876 362 GLRIWVYSGDTDGRVPVTST-RYSINKMGLKIKEEWRAWFHKHQVAGWVETYEKGLTLVTVRGAGHQVPAFAPAQSLSLF 440 (454)
Q Consensus 362 ~~rVliy~Gd~D~i~~~~Gt-~~~i~~L~w~~~~~~~~w~~~~~~~Gy~~~~~~~Ltf~~V~gAGHmvP~dqP~~a~~~i 440 (454)
..+|||..|+.|.+++.... +.+...+. +.++.+|++|||+++.++|+...++|
T Consensus 227 ~~PtliI~G~~D~~~~~~~~~~~~~~~ip-------------------------~~~~~~i~~aGH~~~~e~Pe~~~~~i 281 (286)
T PRK03204 227 TKPTLLVWGMKDVAFRPKTILPRLRATFP-------------------------DHVLVELPNAKHFIQEDAPDRIAAAI 281 (286)
T ss_pred CCCeEEEecCCCcccCcHHHHHHHHHhcC-------------------------CCeEEEcCCCcccccccCHHHHHHHH
Confidence 69999999999998876543 44434433 78889999999999999999999999
Q ss_pred HHHHc
Q 012876 441 TKFLS 445 (454)
Q Consensus 441 ~~fl~ 445 (454)
.+|+.
T Consensus 282 ~~~~~ 286 (286)
T PRK03204 282 IERFG 286 (286)
T ss_pred HHhcC
Confidence 99973
No 13
>PHA02857 monoglyceride lipase; Provisional
Probab=99.03 E-value=2.6e-08 Score=96.16 Aligned_cols=114 Identities=13% Similarity=0.164 Sum_probs=77.3
Q ss_pred CceeEEEEEEecCCCCCCCeEEEeCCCCCchhhchhhhhhcCCeEEcCCCCcccccCCCccc-ccceEEEeCCCccCCCC
Q 012876 64 HKALFYWFFEAQKGVSSKPLVLWLNGGPGCSSIAYGAAQELGPFLVGGNGSRLKFNKYSWNK-AANMLFLEAPVGVGFSY 142 (454)
Q Consensus 64 ~~~lfy~f~es~~~~~~~PlilWlnGGPG~SS~~~g~f~E~GP~~~~~~~~~l~~N~~sW~~-~anvlyIDqPvGtGfSy 142 (454)
|..|+|.+++.. +..+|+||.+.|..++|.. |-.+.+. +.+ -..++-+|.| |.|.|.
T Consensus 10 g~~l~~~~~~~~--~~~~~~v~llHG~~~~~~~-~~~~~~~------------------l~~~g~~via~D~~-G~G~S~ 67 (276)
T PHA02857 10 NDYIYCKYWKPI--TYPKALVFISHGAGEHSGR-YEELAEN------------------ISSLGILVFSHDHI-GHGRSN 67 (276)
T ss_pred CCEEEEEeccCC--CCCCEEEEEeCCCccccch-HHHHHHH------------------HHhCCCEEEEccCC-CCCCCC
Confidence 678999888764 3456899999999777776 5443321 222 2679999965 999986
Q ss_pred cCCCCCCcccChHHhHHHHHHHHHHHHHHCCCCCCCCeEEEcccccc---------cccCcceeeeeccccc
Q 012876 143 TNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAD---------SFINLKGFMIGNAVIN 205 (454)
Q Consensus 143 ~~~~~~~~~~~~~~~A~~~~~fL~~f~~~fp~~~~~~~yI~GESYgG---------~~inLkGi~iGng~~~ 205 (454)
.... ... +-....+|+.+++..+.+.+ ...+++|.|+|.|| .+-.++|+++.+|.++
T Consensus 68 ~~~~-~~~--~~~~~~~d~~~~l~~~~~~~---~~~~~~lvG~S~GG~ia~~~a~~~p~~i~~lil~~p~~~ 133 (276)
T PHA02857 68 GEKM-MID--DFGVYVRDVVQHVVTIKSTY---PGVPVFLLGHSMGATISILAAYKNPNLFTAMILMSPLVN 133 (276)
T ss_pred CccC-CcC--CHHHHHHHHHHHHHHHHhhC---CCCCEEEEEcCchHHHHHHHHHhCccccceEEEeccccc
Confidence 4321 111 23345667777776554443 35689999999999 2335899999998765
No 14
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=99.02 E-value=1.2e-08 Score=99.65 Aligned_cols=114 Identities=14% Similarity=0.137 Sum_probs=76.6
Q ss_pred eEEecCCCCceeEEEEEEecCCCCCCCeEEEeCCCCCchhhchhhhhhcCCeEEcCCCCcccccCCCcccccceEEEeCC
Q 012876 56 YVKLRPNDHKALFYWFFEAQKGVSSKPLVLWLNGGPGCSSIAYGAAQELGPFLVGGNGSRLKFNKYSWNKAANMLFLEAP 135 (454)
Q Consensus 56 yl~v~~~~~~~lfy~f~es~~~~~~~PlilWlnGGPG~SS~~~g~f~E~GP~~~~~~~~~l~~N~~sW~~~anvlyIDqP 135 (454)
|++++ +.+++|.-. .+ ..|.||.|.|.+++|.+ |-.+.+. | .+..++|.+|.|
T Consensus 12 ~~~~~---~~~i~y~~~---G~--~~~~vlllHG~~~~~~~-w~~~~~~-----------L-------~~~~~vi~~Dlp 64 (294)
T PLN02824 12 TWRWK---GYNIRYQRA---GT--SGPALVLVHGFGGNADH-WRKNTPV-----------L-------AKSHRVYAIDLL 64 (294)
T ss_pred eEEEc---CeEEEEEEc---CC--CCCeEEEECCCCCChhH-HHHHHHH-----------H-------HhCCeEEEEcCC
Confidence 66664 455655332 11 23789999999999988 6655431 2 234689999976
Q ss_pred CccCCCCcCCCCCC---cccChHHhHHHHHHHHHHHHHHCCCCCCCCeEEEcccccc---------cccCcceeeeeccc
Q 012876 136 VGVGFSYTNNSEDL---HKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAD---------SFINLKGFMIGNAV 203 (454)
Q Consensus 136 vGtGfSy~~~~~~~---~~~~~~~~A~~~~~fL~~f~~~fp~~~~~~~yI~GESYgG---------~~inLkGi~iGng~ 203 (454)
|.|.|...+.... ..++.++.|+++.++|..+ ..++++|.|+|.|| .+-.++++++.|+.
T Consensus 65 -G~G~S~~~~~~~~~~~~~~~~~~~a~~l~~~l~~l-------~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lili~~~ 136 (294)
T PLN02824 65 -GYGYSDKPNPRSAPPNSFYTFETWGEQLNDFCSDV-------VGDPAFVICNSVGGVVGLQAAVDAPELVRGVMLINIS 136 (294)
T ss_pred -CCCCCCCCccccccccccCCHHHHHHHHHHHHHHh-------cCCCeEEEEeCHHHHHHHHHHHhChhheeEEEEECCC
Confidence 9999975432110 0125666777777777643 23589999999999 34569999999986
Q ss_pred c
Q 012876 204 I 204 (454)
Q Consensus 204 ~ 204 (454)
.
T Consensus 137 ~ 137 (294)
T PLN02824 137 L 137 (294)
T ss_pred c
Confidence 5
No 15
>PRK00870 haloalkane dehalogenase; Provisional
Probab=99.01 E-value=7.6e-08 Score=94.38 Aligned_cols=131 Identities=18% Similarity=0.216 Sum_probs=84.6
Q ss_pred cCcceecCCCCCCCCceeEEEeEEecCCCCc--eeEEEEEEecCCCCCCCeEEEeCCCCCchhhchhhhhhcCCeEEcCC
Q 012876 35 DADRVRDLPGQPKVEFKHYAGYVKLRPNDHK--ALFYWFFEAQKGVSSKPLVLWLNGGPGCSSIAYGAAQELGPFLVGGN 112 (454)
Q Consensus 35 ~~~~v~~lpg~~~~~~~~~sGyl~v~~~~~~--~lfy~f~es~~~~~~~PlilWlnGGPG~SS~~~g~f~E~GP~~~~~~ 112 (454)
++.++.+||.++ .--.|+.++...+. +++|.-. .++ +.|.||.+.|.|+.+.. |..+.+
T Consensus 7 ~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~i~y~~~---G~~-~~~~lvliHG~~~~~~~-w~~~~~--------- 67 (302)
T PRK00870 7 PDSRFENLPDYP-----FAPHYVDVDDGDGGPLRMHYVDE---GPA-DGPPVLLLHGEPSWSYL-YRKMIP--------- 67 (302)
T ss_pred CcccccCCcCCC-----CCceeEeecCCCCceEEEEEEec---CCC-CCCEEEEECCCCCchhh-HHHHHH---------
Confidence 466788999663 24567888753333 5665532 233 46789999999888777 544331
Q ss_pred CCcccccCCCcccccceEEEeCCCccCCCCcCCC-CCCcccChHHhHHHHHHHHHHHHHHCCCCCCCCeEEEcccccc--
Q 012876 113 GSRLKFNKYSWNKAANMLFLEAPVGVGFSYTNNS-EDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAD-- 189 (454)
Q Consensus 113 ~~~l~~N~~sW~~~anvlyIDqPvGtGfSy~~~~-~~~~~~~~~~~A~~~~~fL~~f~~~fp~~~~~~~yI~GESYgG-- 189 (454)
.|.. +-.+|+.+|.| |.|.|..... ..+ +.+..++++.++|+. +...+++|.|+|+||
T Consensus 68 --~L~~------~gy~vi~~Dl~-G~G~S~~~~~~~~~---~~~~~a~~l~~~l~~-------l~~~~v~lvGhS~Gg~i 128 (302)
T PRK00870 68 --ILAA------AGHRVIAPDLI-GFGRSDKPTRREDY---TYARHVEWMRSWFEQ-------LDLTDVTLVCQDWGGLI 128 (302)
T ss_pred --HHHh------CCCEEEEECCC-CCCCCCCCCCcccC---CHHHHHHHHHHHHHH-------cCCCCEEEEEEChHHHH
Confidence 1111 23789999966 9998843221 122 455666666655543 234579999999999
Q ss_pred -------cccCcceeeeeccc
Q 012876 190 -------SFINLKGFMIGNAV 203 (454)
Q Consensus 190 -------~~inLkGi~iGng~ 203 (454)
.+-.++++++.++.
T Consensus 129 a~~~a~~~p~~v~~lvl~~~~ 149 (302)
T PRK00870 129 GLRLAAEHPDRFARLVVANTG 149 (302)
T ss_pred HHHHHHhChhheeEEEEeCCC
Confidence 33468999988864
No 16
>PRK10673 acyl-CoA esterase; Provisional
Probab=98.95 E-value=3.6e-08 Score=93.65 Aligned_cols=95 Identities=12% Similarity=0.101 Sum_probs=69.6
Q ss_pred CCCCCCCeEEEeCCCCCchhhchhhhhhcCCeEEcCCCCcccccCCCcccccceEEEeCCCccCCCCcCCCCCCcccChH
Q 012876 76 KGVSSKPLVLWLNGGPGCSSIAYGAAQELGPFLVGGNGSRLKFNKYSWNKAANMLFLEAPVGVGFSYTNNSEDLHKLGDQ 155 (454)
Q Consensus 76 ~~~~~~PlilWlnGGPG~SS~~~g~f~E~GP~~~~~~~~~l~~N~~sW~~~anvlyIDqPvGtGfSy~~~~~~~~~~~~~ 155 (454)
+.+.+.|.||++.|.+|.+.. +.-+.+. + .+..++|.+|.| |.|.|... ..+ +.+
T Consensus 11 ~~~~~~~~iv~lhG~~~~~~~-~~~~~~~-----------l-------~~~~~vi~~D~~-G~G~s~~~--~~~---~~~ 65 (255)
T PRK10673 11 QNPHNNSPIVLVHGLFGSLDN-LGVLARD-----------L-------VNDHDIIQVDMR-NHGLSPRD--PVM---NYP 65 (255)
T ss_pred CCCCCCCCEEEECCCCCchhH-HHHHHHH-----------H-------hhCCeEEEECCC-CCCCCCCC--CCC---CHH
Confidence 456778999999999999877 6554432 1 234699999977 88988643 222 566
Q ss_pred HhHHHHHHHHHHHHHHCCCCCCCCeEEEcccccc---------cccCcceeeeecc
Q 012876 156 VTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAD---------SFINLKGFMIGNA 202 (454)
Q Consensus 156 ~~A~~~~~fL~~f~~~fp~~~~~~~yI~GESYgG---------~~inLkGi~iGng 202 (454)
+.++++.++|..+ .-++++|.|+|.|| .+-.++++++.++
T Consensus 66 ~~~~d~~~~l~~l-------~~~~~~lvGhS~Gg~va~~~a~~~~~~v~~lvli~~ 114 (255)
T PRK10673 66 AMAQDLLDTLDAL-------QIEKATFIGHSMGGKAVMALTALAPDRIDKLVAIDI 114 (255)
T ss_pred HHHHHHHHHHHHc-------CCCceEEEEECHHHHHHHHHHHhCHhhcceEEEEec
Confidence 7788888888653 23479999999999 3456899999874
No 17
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=98.91 E-value=3.3e-07 Score=88.46 Aligned_cols=59 Identities=20% Similarity=0.128 Sum_probs=52.4
Q ss_pred CCeEEEEecCCCcccCchHHHHHHHHcCCCCccceeeceeCCeEeEEEEEeecCeEEEEEcCCccccccCChHHHHHHHH
Q 012876 362 GLRIWVYSGDTDGRVPVTSTRYSINKMGLKIKEEWRAWFHKHQVAGWVETYEKGLTLVTVRGAGHQVPAFAPAQSLSLFT 441 (454)
Q Consensus 362 ~~rVliy~Gd~D~i~~~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~Gy~~~~~~~Ltf~~V~gAGHmvP~dqP~~a~~~i~ 441 (454)
.++||+..|..|.+++....+.+...+. +..++.|.+|||+++.++|+...++|.
T Consensus 223 ~~Pvlli~G~~D~~v~~~~~~~~~~~~~-------------------------~~~~~~i~~agH~~~~e~p~~~~~~i~ 277 (282)
T TIGR03343 223 KAKTLVTWGRDDRFVPLDHGLKLLWNMP-------------------------DAQLHVFSRCGHWAQWEHADAFNRLVI 277 (282)
T ss_pred CCCEEEEEccCCCcCCchhHHHHHHhCC-------------------------CCEEEEeCCCCcCCcccCHHHHHHHHH
Confidence 7899999999999999877777666643 778899999999999999999999999
Q ss_pred HHHc
Q 012876 442 KFLS 445 (454)
Q Consensus 442 ~fl~ 445 (454)
+|+.
T Consensus 278 ~fl~ 281 (282)
T TIGR03343 278 DFLR 281 (282)
T ss_pred HHhh
Confidence 9985
No 18
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=98.89 E-value=1.9e-07 Score=94.16 Aligned_cols=109 Identities=17% Similarity=0.120 Sum_probs=70.1
Q ss_pred eeEEEEEEecCCCCCCCeEEEeCCCCCchhhchhhhhhcCCeEEcCCCCcccccCCCcccccceEEEeCCCccCCCCcCC
Q 012876 66 ALFYWFFEAQKGVSSKPLVLWLNGGPGCSSIAYGAAQELGPFLVGGNGSRLKFNKYSWNKAANMLFLEAPVGVGFSYTNN 145 (454)
Q Consensus 66 ~lfy~f~es~~~~~~~PlilWlnGGPG~SS~~~g~f~E~GP~~~~~~~~~l~~N~~sW~~~anvlyIDqPvGtGfSy~~~ 145 (454)
.++|.-..+.....+.|.||.|.|.++.+.. |..+.+. | .+...+|.+|.| |.|.|....
T Consensus 73 ~i~Y~~~G~g~~~~~gp~lvllHG~~~~~~~-w~~~~~~-----------L-------~~~~~via~Dl~-G~G~S~~~~ 132 (360)
T PLN02679 73 SINYLVKGSPEVTSSGPPVLLVHGFGASIPH-WRRNIGV-----------L-------AKNYTVYAIDLL-GFGASDKPP 132 (360)
T ss_pred eEEEEEecCcccCCCCCeEEEECCCCCCHHH-HHHHHHH-----------H-------hcCCEEEEECCC-CCCCCCCCC
Confidence 5666543221011134778899999988887 5544321 1 223689999976 999885432
Q ss_pred CCCCcccChHHhHHHHHHHHHHHHHHCCCCCCCCeEEEcccccc----------cccCcceeeeecccc
Q 012876 146 SEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAD----------SFINLKGFMIGNAVI 204 (454)
Q Consensus 146 ~~~~~~~~~~~~A~~~~~fL~~f~~~fp~~~~~~~yI~GESYgG----------~~inLkGi~iGng~~ 204 (454)
...| +-+..++++.++|... ...+++|.|+|+|| .+-.++|+++.|+..
T Consensus 133 ~~~~---~~~~~a~~l~~~l~~l-------~~~~~~lvGhS~Gg~ia~~~a~~~~P~rV~~LVLi~~~~ 191 (360)
T PLN02679 133 GFSY---TMETWAELILDFLEEV-------VQKPTVLIGNSVGSLACVIAASESTRDLVRGLVLLNCAG 191 (360)
T ss_pred Cccc---cHHHHHHHHHHHHHHh-------cCCCeEEEEECHHHHHHHHHHHhcChhhcCEEEEECCcc
Confidence 2222 5566777777777642 23589999999999 123589999999753
No 19
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=98.85 E-value=2.7e-07 Score=91.74 Aligned_cols=130 Identities=13% Similarity=0.144 Sum_probs=81.8
Q ss_pred eEEEeEEecCCCCceeEEEEEEecCCCCCCCeEEEeCCCCCchhhchhhhhhcCCeEEcCCCCcccccCCCccc-ccceE
Q 012876 52 HYAGYVKLRPNDHKALFYWFFEAQKGVSSKPLVLWLNGGPGCSSIAYGAAQELGPFLVGGNGSRLKFNKYSWNK-AANML 130 (454)
Q Consensus 52 ~~sGyl~v~~~~~~~lfy~f~es~~~~~~~PlilWlnGGPG~SS~~~g~f~E~GP~~~~~~~~~l~~N~~sW~~-~anvl 130 (454)
...+++... .|..|+|+.+........+|+||++.|..+.++-.+-.+. ..+++ -.+|+
T Consensus 32 ~~~~~~~~~--dg~~l~~~~~~~~~~~~~~~~VvllHG~~~~~~~~~~~~~------------------~~L~~~Gy~V~ 91 (330)
T PLN02298 32 GSKSFFTSP--RGLSLFTRSWLPSSSSPPRALIFMVHGYGNDISWTFQSTA------------------IFLAQMGFACF 91 (330)
T ss_pred cccceEEcC--CCCEEEEEEEecCCCCCCceEEEEEcCCCCCcceehhHHH------------------HHHHhCCCEEE
Confidence 346677664 3678998765432222456899999998543321100000 01233 37899
Q ss_pred EEeCCCccCCCCcCCCCCCcccChHHhHHHHHHHHHHHHHHCCCCCCCCeEEEcccccc---------cccCcceeeeec
Q 012876 131 FLEAPVGVGFSYTNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAD---------SFINLKGFMIGN 201 (454)
Q Consensus 131 yIDqPvGtGfSy~~~~~~~~~~~~~~~A~~~~~fL~~f~~~fp~~~~~~~yI~GESYgG---------~~inLkGi~iGn 201 (454)
.+|.| |.|.|.... .+.. +.+..++|+..+++..... .++...+++|.|+|.|| .+-.++|+++.+
T Consensus 92 ~~D~r-GhG~S~~~~--~~~~-~~~~~~~D~~~~i~~l~~~-~~~~~~~i~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~ 166 (330)
T PLN02298 92 ALDLE-GHGRSEGLR--AYVP-NVDLVVEDCLSFFNSVKQR-EEFQGLPRFLYGESMGGAICLLIHLANPEGFDGAVLVA 166 (330)
T ss_pred EecCC-CCCCCCCcc--ccCC-CHHHHHHHHHHHHHHHHhc-ccCCCCCEEEEEecchhHHHHHHHhcCcccceeEEEec
Confidence 99987 999885322 2211 5566788888887755432 23444579999999999 233599999999
Q ss_pred ccccC
Q 012876 202 AVIND 206 (454)
Q Consensus 202 g~~~p 206 (454)
++...
T Consensus 167 ~~~~~ 171 (330)
T PLN02298 167 PMCKI 171 (330)
T ss_pred ccccC
Confidence 87643
No 20
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=98.83 E-value=2.3e-07 Score=86.63 Aligned_cols=59 Identities=25% Similarity=0.376 Sum_probs=51.1
Q ss_pred CCeEEEEecCCCcccCchHHHHHHHHcCCCCccceeeceeCCeEeEEEEEeecCeEEEEEcCCccccccCChHHHHHHHH
Q 012876 362 GLRIWVYSGDTDGRVPVTSTRYSINKMGLKIKEEWRAWFHKHQVAGWVETYEKGLTLVTVRGAGHQVPAFAPAQSLSLFT 441 (454)
Q Consensus 362 ~~rVliy~Gd~D~i~~~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~Gy~~~~~~~Ltf~~V~gAGHmvP~dqP~~a~~~i~ 441 (454)
..+|++.+|+.|.+++....+.+.+.+. +.+++.+.++||+++.++|+...+.++
T Consensus 193 ~~Pvlii~g~~D~~~~~~~~~~~~~~~~-------------------------~~~~~~~~~~gH~~~~~~p~~~~~~i~ 247 (251)
T TIGR02427 193 AVPTLCIAGDQDGSTPPELVREIADLVP-------------------------GARFAEIRGAGHIPCVEQPEAFNAALR 247 (251)
T ss_pred CCCeEEEEeccCCcCChHHHHHHHHhCC-------------------------CceEEEECCCCCcccccChHHHHHHHH
Confidence 6899999999999999887776665533 567788999999999999999999999
Q ss_pred HHHc
Q 012876 442 KFLS 445 (454)
Q Consensus 442 ~fl~ 445 (454)
.|+.
T Consensus 248 ~fl~ 251 (251)
T TIGR02427 248 DFLR 251 (251)
T ss_pred HHhC
Confidence 9973
No 21
>PRK06489 hypothetical protein; Provisional
Probab=98.82 E-value=1.3e-06 Score=87.94 Aligned_cols=59 Identities=15% Similarity=0.219 Sum_probs=48.4
Q ss_pred CCeEEEEecCCCcccCchHH--HHHHHHcCCCCccceeeceeCCeEeEEEEEeecCeEEEEEcCC----ccccccCChHH
Q 012876 362 GLRIWVYSGDTDGRVPVTST--RYSINKMGLKIKEEWRAWFHKHQVAGWVETYEKGLTLVTVRGA----GHQVPAFAPAQ 435 (454)
Q Consensus 362 ~~rVliy~Gd~D~i~~~~Gt--~~~i~~L~w~~~~~~~~w~~~~~~~Gy~~~~~~~Ltf~~V~gA----GHmvP~dqP~~ 435 (454)
..+|||.+|+.|.++|.... +...+.+. +..+++|.+| ||++. ++|+.
T Consensus 292 ~~PvLvI~G~~D~~~p~~~~~~~~la~~ip-------------------------~a~l~~i~~a~~~~GH~~~-e~P~~ 345 (360)
T PRK06489 292 KAPVLAINSADDERNPPETGVMEAALKRVK-------------------------HGRLVLIPASPETRGHGTT-GSAKF 345 (360)
T ss_pred CCCEEEEecCCCcccChhhHHHHHHHHhCc-------------------------CCeEEEECCCCCCCCcccc-cCHHH
Confidence 79999999999999987754 34444432 6678999996 99985 89999
Q ss_pred HHHHHHHHHcC
Q 012876 436 SLSLFTKFLSA 446 (454)
Q Consensus 436 a~~~i~~fl~~ 446 (454)
..+.|.+|+..
T Consensus 346 ~~~~i~~FL~~ 356 (360)
T PRK06489 346 WKAYLAEFLAQ 356 (360)
T ss_pred HHHHHHHHHHh
Confidence 99999999964
No 22
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=98.82 E-value=3.5e-07 Score=91.77 Aligned_cols=118 Identities=13% Similarity=0.153 Sum_probs=76.5
Q ss_pred CceeEEEEEEecCCCCCCCeEEEeCCCCCchhhchhhhhhcCCeEEcCCCCcccccCCCccc-ccceEEEeCCCccCCCC
Q 012876 64 HKALFYWFFEAQKGVSSKPLVLWLNGGPGCSSIAYGAAQELGPFLVGGNGSRLKFNKYSWNK-AANMLFLEAPVGVGFSY 142 (454)
Q Consensus 64 ~~~lfy~f~es~~~~~~~PlilWlnGGPG~SS~~~g~f~E~GP~~~~~~~~~l~~N~~sW~~-~anvlyIDqPvGtGfSy 142 (454)
|..+|+..+...+ .+.+|+||.+.|..+.++..+-.+. + .+.+ -.+|+-+|.| |.|.|.
T Consensus 71 g~~l~~~~~~p~~-~~~~~~iv~lHG~~~~~~~~~~~~~---~---------------~l~~~g~~v~~~D~~-G~G~S~ 130 (349)
T PLN02385 71 GVEIFSKSWLPEN-SRPKAAVCFCHGYGDTCTFFFEGIA---R---------------KIASSGYGVFAMDYP-GFGLSE 130 (349)
T ss_pred CCEEEEEEEecCC-CCCCeEEEEECCCCCccchHHHHHH---H---------------HHHhCCCEEEEecCC-CCCCCC
Confidence 6678887665432 2457999999998665554111111 1 1122 3689999987 999885
Q ss_pred cCCCCCCcccChHHhHHHHHHHHHHHHHHCCCCCCCCeEEEcccccc---------cccCcceeeeeccccc
Q 012876 143 TNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAD---------SFINLKGFMIGNAVIN 205 (454)
Q Consensus 143 ~~~~~~~~~~~~~~~A~~~~~fL~~f~~~fp~~~~~~~yI~GESYgG---------~~inLkGi~iGng~~~ 205 (454)
... .+.. +-+..++|+.++++.. ...+++...+++|.|+|+|| .+-.++|+++.+|...
T Consensus 131 ~~~--~~~~-~~~~~~~dv~~~l~~l-~~~~~~~~~~~~LvGhSmGG~val~~a~~~p~~v~glVLi~p~~~ 198 (349)
T PLN02385 131 GLH--GYIP-SFDDLVDDVIEHYSKI-KGNPEFRGLPSFLFGQSMGGAVALKVHLKQPNAWDGAILVAPMCK 198 (349)
T ss_pred CCC--CCcC-CHHHHHHHHHHHHHHH-HhccccCCCCEEEEEeccchHHHHHHHHhCcchhhheeEeccccc
Confidence 432 2211 4556788887777653 33345556689999999999 3345899999998754
No 23
>PRK03592 haloalkane dehalogenase; Provisional
Probab=98.79 E-value=2e-07 Score=91.02 Aligned_cols=106 Identities=16% Similarity=0.182 Sum_probs=72.8
Q ss_pred CceeEEEEEEecCCCCCCCeEEEeCCCCCchhhchhhhhhcCCeEEcCCCCcccccCCCcccccceEEEeCCCccCCCCc
Q 012876 64 HKALFYWFFEAQKGVSSKPLVLWLNGGPGCSSIAYGAAQELGPFLVGGNGSRLKFNKYSWNKAANMLFLEAPVGVGFSYT 143 (454)
Q Consensus 64 ~~~lfy~f~es~~~~~~~PlilWlnGGPG~SS~~~g~f~E~GP~~~~~~~~~l~~N~~sW~~~anvlyIDqPvGtGfSy~ 143 (454)
+..++|.-. .+.|.||.+.|.|+.+.. |-.+.+ .| .+...++-+|.| |.|.|..
T Consensus 16 g~~i~y~~~------G~g~~vvllHG~~~~~~~-w~~~~~-----------~L-------~~~~~via~D~~-G~G~S~~ 69 (295)
T PRK03592 16 GSRMAYIET------GEGDPIVFLHGNPTSSYL-WRNIIP-----------HL-------AGLGRCLAPDLI-GMGASDK 69 (295)
T ss_pred CEEEEEEEe------CCCCEEEEECCCCCCHHH-HHHHHH-----------HH-------hhCCEEEEEcCC-CCCCCCC
Confidence 455666532 134789999999998888 654432 12 223489999976 9999864
Q ss_pred CCCCCCcccChHHhHHHHHHHHHHHHHHCCCCCCCCeEEEcccccc---------cccCcceeeeecccccC
Q 012876 144 NNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAD---------SFINLKGFMIGNAVIND 206 (454)
Q Consensus 144 ~~~~~~~~~~~~~~A~~~~~fL~~f~~~fp~~~~~~~yI~GESYgG---------~~inLkGi~iGng~~~p 206 (454)
.. ..+ +.+..|+++..+++.+ ...+++|.|+|.|| .+-.++++++.|+...+
T Consensus 70 ~~-~~~---~~~~~a~dl~~ll~~l-------~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~~ 130 (295)
T PRK03592 70 PD-IDY---TFADHARYLDAWFDAL-------GLDDVVLVGHDWGSALGFDWAARHPDRVRGIAFMEAIVRP 130 (295)
T ss_pred CC-CCC---CHHHHHHHHHHHHHHh-------CCCCeEEEEECHHHHHHHHHHHhChhheeEEEEECCCCCC
Confidence 32 222 5666777777666542 33589999999999 35568999999986554
No 24
>PRK10349 carboxylesterase BioH; Provisional
Probab=98.78 E-value=4.3e-07 Score=86.60 Aligned_cols=59 Identities=17% Similarity=0.059 Sum_probs=51.0
Q ss_pred CCeEEEEecCCCcccCchHHHHHHHHcCCCCccceeeceeCCeEeEEEEEeecCeEEEEEcCCccccccCChHHHHHHHH
Q 012876 362 GLRIWVYSGDTDGRVPVTSTRYSINKMGLKIKEEWRAWFHKHQVAGWVETYEKGLTLVTVRGAGHQVPAFAPAQSLSLFT 441 (454)
Q Consensus 362 ~~rVliy~Gd~D~i~~~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~Gy~~~~~~~Ltf~~V~gAGHmvP~dqP~~a~~~i~ 441 (454)
.++|||.+|..|.++|....+...+.+. +..++.+.++||+.+.++|+...+.+.
T Consensus 196 ~~P~lii~G~~D~~~~~~~~~~~~~~i~-------------------------~~~~~~i~~~gH~~~~e~p~~f~~~l~ 250 (256)
T PRK10349 196 SMPFLRLYGYLDGLVPRKVVPMLDKLWP-------------------------HSESYIFAKAAHAPFISHPAEFCHLLV 250 (256)
T ss_pred CCCeEEEecCCCccCCHHHHHHHHHhCC-------------------------CCeEEEeCCCCCCccccCHHHHHHHHH
Confidence 7999999999999999877665555533 778899999999999999999999999
Q ss_pred HHHc
Q 012876 442 KFLS 445 (454)
Q Consensus 442 ~fl~ 445 (454)
+|-.
T Consensus 251 ~~~~ 254 (256)
T PRK10349 251 ALKQ 254 (256)
T ss_pred HHhc
Confidence 8864
No 25
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=98.78 E-value=2.4e-07 Score=89.59 Aligned_cols=108 Identities=15% Similarity=0.043 Sum_probs=71.7
Q ss_pred CceeEEEEEEecCCCCCCCeEEEeCCCCCchhhchhhhhhcCCeEEcCCCCcccccCCCcccccceEEEeCCCccCCCCc
Q 012876 64 HKALFYWFFEAQKGVSSKPLVLWLNGGPGCSSIAYGAAQELGPFLVGGNGSRLKFNKYSWNKAANMLFLEAPVGVGFSYT 143 (454)
Q Consensus 64 ~~~lfy~f~es~~~~~~~PlilWlnGGPG~SS~~~g~f~E~GP~~~~~~~~~l~~N~~sW~~~anvlyIDqPvGtGfSy~ 143 (454)
+..+.||..+. . ...|.||+++|-++.+.. |..+.+. | .+..++|.+|.| |.|.|-.
T Consensus 11 ~~~~~~~~~~~--~-~~~~plvllHG~~~~~~~-w~~~~~~-----------L-------~~~~~vi~~Dl~-G~G~S~~ 67 (276)
T TIGR02240 11 GQSIRTAVRPG--K-EGLTPLLIFNGIGANLEL-VFPFIEA-----------L-------DPDLEVIAFDVP-GVGGSST 67 (276)
T ss_pred CcEEEEEEecC--C-CCCCcEEEEeCCCcchHH-HHHHHHH-----------h-------ccCceEEEECCC-CCCCCCC
Confidence 45688877542 2 344678999987666666 5433321 1 134699999976 9999953
Q ss_pred CCCCCCcccChHHhHHHHHHHHHHHHHHCCCCCCCCeEEEcccccc---------cccCcceeeeeccccc
Q 012876 144 NNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAD---------SFINLKGFMIGNAVIN 205 (454)
Q Consensus 144 ~~~~~~~~~~~~~~A~~~~~fL~~f~~~fp~~~~~~~yI~GESYgG---------~~inLkGi~iGng~~~ 205 (454)
. ...+ +-+..++++.++|... .-++++|.|+|+|| .+-.++++++.|+...
T Consensus 68 ~-~~~~---~~~~~~~~~~~~i~~l-------~~~~~~LvG~S~GG~va~~~a~~~p~~v~~lvl~~~~~~ 127 (276)
T TIGR02240 68 P-RHPY---RFPGLAKLAARMLDYL-------DYGQVNAIGVSWGGALAQQFAHDYPERCKKLILAATAAG 127 (276)
T ss_pred C-CCcC---cHHHHHHHHHHHHHHh-------CcCceEEEEECHHHHHHHHHHHHCHHHhhheEEeccCCc
Confidence 2 2222 4555667766666542 23479999999999 3446999999998764
No 26
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=98.76 E-value=5.6e-08 Score=89.09 Aligned_cols=94 Identities=19% Similarity=0.207 Sum_probs=64.8
Q ss_pred EEEeCCCCCchhhchhhhhhcCCeEEcCCCCcccccCCCcccccceEEEeCCCccCCCCcCCCCCCcccChHHhHHHHHH
Q 012876 84 VLWLNGGPGCSSIAYGAAQELGPFLVGGNGSRLKFNKYSWNKAANMLFLEAPVGVGFSYTNNSEDLHKLGDQVTANDSYA 163 (454)
Q Consensus 84 ilWlnGGPG~SS~~~g~f~E~GP~~~~~~~~~l~~N~~sW~~~anvlyIDqPvGtGfSy~~~~~~~~~~~~~~~A~~~~~ 163 (454)
||.+.|++|.+.. |.-+.+. |. +-.+++.+|.| |.|.|..... +...+-++.++++.+
T Consensus 1 vv~~hG~~~~~~~-~~~~~~~-----------l~-------~~~~v~~~d~~-G~G~s~~~~~--~~~~~~~~~~~~l~~ 58 (228)
T PF12697_consen 1 VVFLHGFGGSSES-WDPLAEA-----------LA-------RGYRVIAFDLP-GHGRSDPPPD--YSPYSIEDYAEDLAE 58 (228)
T ss_dssp EEEE-STTTTGGG-GHHHHHH-----------HH-------TTSEEEEEECT-TSTTSSSHSS--GSGGSHHHHHHHHHH
T ss_pred eEEECCCCCCHHH-HHHHHHH-----------Hh-------CCCEEEEEecC-Cccccccccc--cCCcchhhhhhhhhh
Confidence 6889999999877 5554431 21 35689999976 9999875443 111245566777666
Q ss_pred HHHHHHHHCCCCCCCCeEEEcccccc---------cccCcceeeeecccccC
Q 012876 164 FLIGWFKRFPNFKSHDFYIAGESYAD---------SFINLKGFMIGNAVIND 206 (454)
Q Consensus 164 fL~~f~~~fp~~~~~~~yI~GESYgG---------~~inLkGi~iGng~~~p 206 (454)
+|+. .. .++++|.|+|+|| .+-.++|+++.++....
T Consensus 59 ~l~~----~~---~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~ 103 (228)
T PF12697_consen 59 LLDA----LG---IKKVILVGHSMGGMIALRLAARYPDRVKGLVLLSPPPPL 103 (228)
T ss_dssp HHHH----TT---TSSEEEEEETHHHHHHHHHHHHSGGGEEEEEEESESSSH
T ss_pred cccc----cc---cccccccccccccccccccccccccccccceeecccccc
Confidence 6543 22 2689999999999 34479999999998754
No 27
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=98.66 E-value=1.5e-06 Score=87.92 Aligned_cols=123 Identities=18% Similarity=0.148 Sum_probs=77.0
Q ss_pred CceeEEEeEEecCCCCceeEEEEEEecCCCCCCCeEEEeCCCCCchhhchhhhhhcCCeEEcCCCCcccccCCCcccccc
Q 012876 49 EFKHYAGYVKLRPNDHKALFYWFFEAQKGVSSKPLVLWLNGGPGCSSIAYGAAQELGPFLVGGNGSRLKFNKYSWNKAAN 128 (454)
Q Consensus 49 ~~~~~sGyl~v~~~~~~~lfy~f~es~~~~~~~PlilWlnGGPG~SS~~~g~f~E~GP~~~~~~~~~l~~N~~sW~~~an 128 (454)
+.++-+|+.... ++-.+||.- . .+...|.||.+.|.|+.+.. |-.+.+. | .+..+
T Consensus 101 ~~~~~~~~~~~~--~~~~~~y~~--~--G~~~~~~ivllHG~~~~~~~-w~~~~~~-----------L-------~~~~~ 155 (383)
T PLN03084 101 GLKMGAQSQASS--DLFRWFCVE--S--GSNNNPPVLLIHGFPSQAYS-YRKVLPV-----------L-------SKNYH 155 (383)
T ss_pred cccccceeEEcC--CceEEEEEe--c--CCCCCCeEEEECCCCCCHHH-HHHHHHH-----------H-------hcCCE
Confidence 334445555432 233444332 2 23456899999999988776 5443321 2 22478
Q ss_pred eEEEeCCCccCCCCcCCCCCCcccChHHhHHHHHHHHHHHHHHCCCCCCCCeEEEcccccc---------cccCcceeee
Q 012876 129 MLFLEAPVGVGFSYTNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAD---------SFINLKGFMI 199 (454)
Q Consensus 129 vlyIDqPvGtGfSy~~~~~~~~~~~~~~~A~~~~~fL~~f~~~fp~~~~~~~yI~GESYgG---------~~inLkGi~i 199 (454)
|+.+|.| |.|+|.......-..++-+..++++..+++.. ...+++|+|+|+|| .+-.++++++
T Consensus 156 Via~Dlp-G~G~S~~p~~~~~~~ys~~~~a~~l~~~i~~l-------~~~~~~LvG~s~GG~ia~~~a~~~P~~v~~lIL 227 (383)
T PLN03084 156 AIAFDWL-GFGFSDKPQPGYGFNYTLDEYVSSLESLIDEL-------KSDKVSLVVQGYFSPPVVKYASAHPDKIKKLIL 227 (383)
T ss_pred EEEECCC-CCCCCCCCcccccccCCHHHHHHHHHHHHHHh-------CCCCceEEEECHHHHHHHHHHHhChHhhcEEEE
Confidence 9999976 99999654321000125566777777666543 23478999999999 3456999999
Q ss_pred ecccc
Q 012876 200 GNAVI 204 (454)
Q Consensus 200 Gng~~ 204 (454)
.|+..
T Consensus 228 i~~~~ 232 (383)
T PLN03084 228 LNPPL 232 (383)
T ss_pred ECCCC
Confidence 99864
No 28
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=98.63 E-value=2.4e-06 Score=86.97 Aligned_cols=116 Identities=16% Similarity=0.157 Sum_probs=79.0
Q ss_pred CceeEEEEEEecCCCCCCCeEEEeCCCCCchhhchhhhhhcCCeEEcCCCCcccccCCCcccccceEEEeCCCccCCCCc
Q 012876 64 HKALFYWFFEAQKGVSSKPLVLWLNGGPGCSSIAYGAAQELGPFLVGGNGSRLKFNKYSWNKAANMLFLEAPVGVGFSYT 143 (454)
Q Consensus 64 ~~~lfy~f~es~~~~~~~PlilWlnGGPG~SS~~~g~f~E~GP~~~~~~~~~l~~N~~sW~~~anvlyIDqPvGtGfSy~ 143 (454)
+..+|++.++... .+.+|+||++.|.++.+.. +-.+.+. +. .+-.+++-+|.| |.|.|..
T Consensus 120 ~~~l~~~~~~p~~-~~~~~~Vl~lHG~~~~~~~-~~~~a~~-----------L~------~~Gy~V~~~D~r-GhG~S~~ 179 (395)
T PLN02652 120 RNALFCRSWAPAA-GEMRGILIIIHGLNEHSGR-YLHFAKQ-----------LT------SCGFGVYAMDWI-GHGGSDG 179 (395)
T ss_pred CCEEEEEEecCCC-CCCceEEEEECCchHHHHH-HHHHHHH-----------HH------HCCCEEEEeCCC-CCCCCCC
Confidence 4578888776532 3457899999999877665 4333321 11 113589999976 9998854
Q ss_pred CCCCCCcccChHHhHHHHHHHHHHHHHHCCCCCCCCeEEEcccccc---------cc--cCcceeeeeccccc
Q 012876 144 NNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAD---------SF--INLKGFMIGNAVIN 205 (454)
Q Consensus 144 ~~~~~~~~~~~~~~A~~~~~fL~~f~~~fp~~~~~~~yI~GESYgG---------~~--inLkGi~iGng~~~ 205 (454)
... +.. +.+..++|+..+++..-..+| ..+++|+|+|+|| +. -.++|+++.+|++.
T Consensus 180 ~~~--~~~-~~~~~~~Dl~~~l~~l~~~~~---~~~i~lvGhSmGG~ial~~a~~p~~~~~v~glVL~sP~l~ 246 (395)
T PLN02652 180 LHG--YVP-SLDYVVEDTEAFLEKIRSENP---GVPCFLFGHSTGGAVVLKAASYPSIEDKLEGIVLTSPALR 246 (395)
T ss_pred CCC--CCc-CHHHHHHHHHHHHHHHHHhCC---CCCEEEEEECHHHHHHHHHHhccCcccccceEEEECcccc
Confidence 322 222 455677888888877666665 3479999999999 12 25899999988864
No 29
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=98.63 E-value=1.9e-06 Score=88.16 Aligned_cols=100 Identities=12% Similarity=0.141 Sum_probs=65.3
Q ss_pred CCCCeEEEeCCCCCchhhchhhhhhcCCeEEcCCCCcccccCCCcccccceEEEeCCCccCCCCcCCCCCCcccChHHhH
Q 012876 79 SSKPLVLWLNGGPGCSSIAYGAAQELGPFLVGGNGSRLKFNKYSWNKAANMLFLEAPVGVGFSYTNNSEDLHKLGDQVTA 158 (454)
Q Consensus 79 ~~~PlilWlnGGPG~SS~~~g~f~E~GP~~~~~~~~~l~~N~~sW~~~anvlyIDqPvGtGfSy~~~~~~~~~~~~~~~A 158 (454)
.+.|.||.+.|.++.+.. +....+ .+ .+..+|+-+|.| |.|.|.... ..+. +.+++.
T Consensus 103 ~~~p~vvllHG~~~~~~~-~~~~~~-----------~L-------~~~~~vi~~D~r-G~G~S~~~~-~~~~--~~~~~~ 159 (402)
T PLN02894 103 EDAPTLVMVHGYGASQGF-FFRNFD-----------AL-------ASRFRVIAIDQL-GWGGSSRPD-FTCK--STEETE 159 (402)
T ss_pred CCCCEEEEECCCCcchhH-HHHHHH-----------HH-------HhCCEEEEECCC-CCCCCCCCC-cccc--cHHHHH
Confidence 467999999999877666 432110 12 223689999976 888884321 1111 233444
Q ss_pred HHHHHHHHHHHHHCCCCCCCCeEEEcccccc---------cccCcceeeeecccc
Q 012876 159 NDSYAFLIGWFKRFPNFKSHDFYIAGESYAD---------SFINLKGFMIGNAVI 204 (454)
Q Consensus 159 ~~~~~fL~~f~~~fp~~~~~~~yI~GESYgG---------~~inLkGi~iGng~~ 204 (454)
+.+.+.+..|.+.. ...+++|.|+|+|| .+-.++++++.++..
T Consensus 160 ~~~~~~i~~~~~~l---~~~~~~lvGhS~GG~la~~~a~~~p~~v~~lvl~~p~~ 211 (402)
T PLN02894 160 AWFIDSFEEWRKAK---NLSNFILLGHSFGGYVAAKYALKHPEHVQHLILVGPAG 211 (402)
T ss_pred HHHHHHHHHHHHHc---CCCCeEEEEECHHHHHHHHHHHhCchhhcEEEEECCcc
Confidence 45566666666533 33479999999999 355789999998764
No 30
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=98.62 E-value=1.5e-06 Score=80.87 Aligned_cols=58 Identities=19% Similarity=0.115 Sum_probs=50.2
Q ss_pred CCeEEEEecCCCcccCchHHHHHHHHcCCCCccceeeceeCCeEeEEEEEeecCeEEEEEcCCccccccCChHHHHHHHH
Q 012876 362 GLRIWVYSGDTDGRVPVTSTRYSINKMGLKIKEEWRAWFHKHQVAGWVETYEKGLTLVTVRGAGHQVPAFAPAQSLSLFT 441 (454)
Q Consensus 362 ~~rVliy~Gd~D~i~~~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~Gy~~~~~~~Ltf~~V~gAGHmvP~dqP~~a~~~i~ 441 (454)
..+|+|.+|..|.+++....+.+.+.+. +-++..+.++||+++.++|+...+.|.
T Consensus 188 ~~Pvlii~g~~D~~~~~~~~~~~~~~~~-------------------------~~~~~~~~~~gH~~~~e~p~~~~~~i~ 242 (245)
T TIGR01738 188 SVPFLRLYGYLDGLVPAKVVPYLDKLAP-------------------------HSELYIFAKAAHAPFLSHAEAFCALLV 242 (245)
T ss_pred CCCEEEEeecCCcccCHHHHHHHHHhCC-------------------------CCeEEEeCCCCCCccccCHHHHHHHHH
Confidence 6899999999999999887776655533 566788999999999999999999999
Q ss_pred HHH
Q 012876 442 KFL 444 (454)
Q Consensus 442 ~fl 444 (454)
+||
T Consensus 243 ~fi 245 (245)
T TIGR01738 243 AFK 245 (245)
T ss_pred hhC
Confidence 986
No 31
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=98.62 E-value=1e-05 Score=83.94 Aligned_cols=67 Identities=9% Similarity=0.112 Sum_probs=55.1
Q ss_pred HHHHHh-cCCeEEEEecCCCcccCchHHHHHHHHcCCCCccceeeceeCCeEeEEEEEeecCeEEEEEcCCcccccc-CC
Q 012876 355 IQKLLN-AGLRIWVYSGDTDGRVPVTSTRYSINKMGLKIKEEWRAWFHKHQVAGWVETYEKGLTLVTVRGAGHQVPA-FA 432 (454)
Q Consensus 355 l~~lL~-~~~rVliy~Gd~D~i~~~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~Gy~~~~~~~Ltf~~V~gAGHmvP~-dq 432 (454)
+..+++ -.++|||.+|+.|.++|....+...+.+. +..++.|.++||+.+. ++
T Consensus 410 l~~l~~~I~vPtLII~Ge~D~ivP~~~~~~la~~iP-------------------------~a~l~vI~~aGH~~~v~e~ 464 (481)
T PLN03087 410 LDHVRDQLKCDVAIFHGGDDELIPVECSYAVKAKVP-------------------------RARVKVIDDKDHITIVVGR 464 (481)
T ss_pred HHHHHHhCCCCEEEEEECCCCCCCHHHHHHHHHhCC-------------------------CCEEEEeCCCCCcchhhcC
Confidence 344443 27999999999999999998887766644 6677899999999986 89
Q ss_pred hHHHHHHHHHHHcC
Q 012876 433 PAQSLSLFTKFLSA 446 (454)
Q Consensus 433 P~~a~~~i~~fl~~ 446 (454)
|+...+.+++|...
T Consensus 465 p~~fa~~L~~F~~~ 478 (481)
T PLN03087 465 QKEFARELEEIWRR 478 (481)
T ss_pred HHHHHHHHHHHhhc
Confidence 99999999999853
No 32
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=98.60 E-value=5.3e-07 Score=86.85 Aligned_cols=118 Identities=17% Similarity=0.238 Sum_probs=80.4
Q ss_pred eeEEEeEEecCCCCceeEEEEEEecCCCCCCCeEEEeCCCCCchhhchhhhhhcCCeEEcCCCCcccccCCCcccccceE
Q 012876 51 KHYAGYVKLRPNDHKALFYWFFEAQKGVSSKPLVLWLNGGPGCSSIAYGAAQELGPFLVGGNGSRLKFNKYSWNKAANML 130 (454)
Q Consensus 51 ~~~sGyl~v~~~~~~~lfy~f~es~~~~~~~PlilWlnGGPG~SS~~~g~f~E~GP~~~~~~~~~l~~N~~sW~~~anvl 130 (454)
...-+|+.++ + +++++.|. -++..|+|+.|.|=|=.+=. +=+-. ..|. .+...+|
T Consensus 21 ~~~hk~~~~~---g--I~~h~~e~--g~~~gP~illlHGfPe~wys-wr~q~-----------~~la------~~~~rvi 75 (322)
T KOG4178|consen 21 AISHKFVTYK---G--IRLHYVEG--GPGDGPIVLLLHGFPESWYS-WRHQI-----------PGLA------SRGYRVI 75 (322)
T ss_pred hcceeeEEEc---c--EEEEEEee--cCCCCCEEEEEccCCccchh-hhhhh-----------hhhh------hcceEEE
Confidence 4567888875 3 88888877 78999999999987766533 10000 0010 1125789
Q ss_pred EEeCCCccCCCCcCCC-CCCcccChHHhHHHHHHHHHHHHHHCCCCCCCCeEEEcccccc---------cccCcceeeee
Q 012876 131 FLEAPVGVGFSYTNNS-EDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAD---------SFINLKGFMIG 200 (454)
Q Consensus 131 yIDqPvGtGfSy~~~~-~~~~~~~~~~~A~~~~~fL~~f~~~fp~~~~~~~yI~GESYgG---------~~inLkGi~iG 200 (454)
.+|.+ |-|+|-.... ..| +-+..+.++..+|.. +...+.++.|++||+ .+-+++|++..
T Consensus 76 A~Dlr-GyG~Sd~P~~~~~Y---t~~~l~~di~~lld~-------Lg~~k~~lvgHDwGaivaw~la~~~Perv~~lv~~ 144 (322)
T KOG4178|consen 76 APDLR-GYGFSDAPPHISEY---TIDELVGDIVALLDH-------LGLKKAFLVGHDWGAIVAWRLALFYPERVDGLVTL 144 (322)
T ss_pred ecCCC-CCCCCCCCCCccee---eHHHHHHHHHHHHHH-------hccceeEEEeccchhHHHHHHHHhChhhcceEEEe
Confidence 99975 9999876544 333 677788887776653 335689999999999 45667788877
Q ss_pred cccc
Q 012876 201 NAVI 204 (454)
Q Consensus 201 ng~~ 204 (454)
|...
T Consensus 145 nv~~ 148 (322)
T KOG4178|consen 145 NVPF 148 (322)
T ss_pred cCCC
Confidence 7554
No 33
>PLN02578 hydrolase
Probab=98.60 E-value=2.4e-06 Score=85.91 Aligned_cols=58 Identities=24% Similarity=0.191 Sum_probs=49.1
Q ss_pred CCeEEEEecCCCcccCchHHHHHHHHcCCCCccceeeceeCCeEeEEEEEeecCeEEEEEcCCccccccCChHHHHHHHH
Q 012876 362 GLRIWVYSGDTDGRVPVTSTRYSINKMGLKIKEEWRAWFHKHQVAGWVETYEKGLTLVTVRGAGHQVPAFAPAQSLSLFT 441 (454)
Q Consensus 362 ~~rVliy~Gd~D~i~~~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~Gy~~~~~~~Ltf~~V~gAGHmvP~dqP~~a~~~i~ 441 (454)
.++|++.+|+.|.+|+....+.+.+.+. +..++.+ ++||+.+.++|++..+.|.
T Consensus 296 ~~PvLiI~G~~D~~v~~~~~~~l~~~~p-------------------------~a~l~~i-~~GH~~~~e~p~~~~~~I~ 349 (354)
T PLN02578 296 SCPLLLLWGDLDPWVGPAKAEKIKAFYP-------------------------DTTLVNL-QAGHCPHDEVPEQVNKALL 349 (354)
T ss_pred CCCEEEEEeCCCCCCCHHHHHHHHHhCC-------------------------CCEEEEe-CCCCCccccCHHHHHHHHH
Confidence 7999999999999999887776655432 5566777 7999999999999999999
Q ss_pred HHHc
Q 012876 442 KFLS 445 (454)
Q Consensus 442 ~fl~ 445 (454)
+|+.
T Consensus 350 ~fl~ 353 (354)
T PLN02578 350 EWLS 353 (354)
T ss_pred HHHh
Confidence 9985
No 34
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.60 E-value=1.8e-06 Score=83.54 Aligned_cols=129 Identities=12% Similarity=0.159 Sum_probs=81.4
Q ss_pred CceeEEEeEEecCCCCceeEEEEEEecCCCCCCCeEEEeCCCCCchhhchhhhhhcCCeEEcCCCCcccccCCCcccccc
Q 012876 49 EFKHYAGYVKLRPNDHKALFYWFFEAQKGVSSKPLVLWLNGGPGCSSIAYGAAQELGPFLVGGNGSRLKFNKYSWNKAAN 128 (454)
Q Consensus 49 ~~~~~sGyl~v~~~~~~~lfy~f~es~~~~~~~PlilWlnGGPG~SS~~~g~f~E~GP~~~~~~~~~l~~N~~sW~~~an 128 (454)
+.+--+=|+.+.. +... |.++-....++++-++.+.| =|++++ +|. .|=-+-.+.-|
T Consensus 62 ~v~~~~~~v~i~~--~~~i--w~~~~~~~~~~~~plVliHG-yGAg~g---~f~---------------~Nf~~La~~~~ 118 (365)
T KOG4409|consen 62 PVPYSKKYVRIPN--GIEI--WTITVSNESANKTPLVLIHG-YGAGLG---LFF---------------RNFDDLAKIRN 118 (365)
T ss_pred CCCcceeeeecCC--Ccee--EEEeecccccCCCcEEEEec-cchhHH---HHH---------------HhhhhhhhcCc
Confidence 3344466777763 2222 33333334466666666774 455444 222 23333445789
Q ss_pred eEEEeCCCccCCCCcCCCCCCcccChHHhHHHHHHHHHHHHHHCCCCCCCCeEEEcccccc---------cccCcceeee
Q 012876 129 MLFLEAPVGVGFSYTNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAD---------SFINLKGFMI 199 (454)
Q Consensus 129 vlyIDqPvGtGfSy~~~~~~~~~~~~~~~A~~~~~fL~~f~~~fp~~~~~~~yI~GESYgG---------~~inLkGi~i 199 (454)
|..||+| |-|.|.... +.. +.+.+-+.+.+-+.+|..+.. + .+.+|.|||+|| .+-.++=++|
T Consensus 119 vyaiDll-G~G~SSRP~---F~~-d~~~~e~~fvesiE~WR~~~~-L--~KmilvGHSfGGYLaa~YAlKyPerV~kLiL 190 (365)
T KOG4409|consen 119 VYAIDLL-GFGRSSRPK---FSI-DPTTAEKEFVESIEQWRKKMG-L--EKMILVGHSFGGYLAAKYALKYPERVEKLIL 190 (365)
T ss_pred eEEeccc-CCCCCCCCC---CCC-CcccchHHHHHHHHHHHHHcC-C--cceeEeeccchHHHHHHHHHhChHhhceEEE
Confidence 9999976 888885432 221 344455688999999998763 2 378999999999 3445899999
Q ss_pred ecccccCCC
Q 012876 200 GNAVINDPT 208 (454)
Q Consensus 200 Gng~~~p~~ 208 (454)
.+||--+..
T Consensus 191 vsP~Gf~~~ 199 (365)
T KOG4409|consen 191 VSPWGFPEK 199 (365)
T ss_pred ecccccccC
Confidence 999976653
No 35
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=98.57 E-value=3e-06 Score=85.26 Aligned_cols=94 Identities=16% Similarity=0.116 Sum_probs=63.5
Q ss_pred CCCCeEEEeCCCCCchhhchhhhhhcCCeEEcCCCCcccccCCCcccccceEEEeCCCccCCCCcCCCCCCcccChHHhH
Q 012876 79 SSKPLVLWLNGGPGCSSIAYGAAQELGPFLVGGNGSRLKFNKYSWNKAANMLFLEAPVGVGFSYTNNSEDLHKLGDQVTA 158 (454)
Q Consensus 79 ~~~PlilWlnGGPG~SS~~~g~f~E~GP~~~~~~~~~l~~N~~sW~~~anvlyIDqPvGtGfSy~~~~~~~~~~~~~~~A 158 (454)
.+.|.||.++|.+|++.. |..+.+. |. +..+++-+|.| |.|.|-..... .+.++.+
T Consensus 129 ~~~~~vl~~HG~~~~~~~-~~~~~~~-----------l~-------~~~~v~~~d~~-g~G~s~~~~~~----~~~~~~~ 184 (371)
T PRK14875 129 GDGTPVVLIHGFGGDLNN-WLFNHAA-----------LA-------AGRPVIALDLP-GHGASSKAVGA----GSLDELA 184 (371)
T ss_pred CCCCeEEEECCCCCccch-HHHHHHH-----------Hh-------cCCEEEEEcCC-CCCCCCCCCCC----CCHHHHH
Confidence 456889999999998887 5555431 21 12689999976 99988432221 1555566
Q ss_pred HHHHHHHHHHHHHCCCCCCCCeEEEcccccc---------cccCcceeeeeccc
Q 012876 159 NDSYAFLIGWFKRFPNFKSHDFYIAGESYAD---------SFINLKGFMIGNAV 203 (454)
Q Consensus 159 ~~~~~fL~~f~~~fp~~~~~~~yI~GESYgG---------~~inLkGi~iGng~ 203 (454)
+++..+++. +...+++|.|+|+|| .+-.++++++.+|.
T Consensus 185 ~~~~~~~~~-------~~~~~~~lvG~S~Gg~~a~~~a~~~~~~v~~lv~~~~~ 231 (371)
T PRK14875 185 AAVLAFLDA-------LGIERAHLVGHSMGGAVALRLAARAPQRVASLTLIAPA 231 (371)
T ss_pred HHHHHHHHh-------cCCccEEEEeechHHHHHHHHHHhCchheeEEEEECcC
Confidence 666555532 334579999999999 24468899888765
No 36
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=98.56 E-value=1.1e-05 Score=79.19 Aligned_cols=118 Identities=15% Similarity=0.276 Sum_probs=72.5
Q ss_pred EEeEEecCCCCceeEEEEEEecCCCCCCCeEEEeCCCCCchhhchhhhhhcCCeEEcCCCCcccccCCCcccccceEEEe
Q 012876 54 AGYVKLRPNDHKALFYWFFEAQKGVSSKPLVLWLNGGPGCSSIAYGAAQELGPFLVGGNGSRLKFNKYSWNKAANMLFLE 133 (454)
Q Consensus 54 sGyl~v~~~~~~~lfy~f~es~~~~~~~PlilWlnGGPG~SS~~~g~f~E~GP~~~~~~~~~l~~N~~sW~~~anvlyID 133 (454)
.+|+.+.+ +..++|+-. ..+. .|-||.+.||||.++. ..... .+ + .+..+||.+|
T Consensus 6 ~~~~~~~~--~~~l~y~~~---g~~~-~~~lvllHG~~~~~~~-~~~~~------------~~--~----~~~~~vi~~D 60 (306)
T TIGR01249 6 SGYLNVSD--NHQLYYEQS---GNPD-GKPVVFLHGGPGSGTD-PGCRR------------FF--D----PETYRIVLFD 60 (306)
T ss_pred CCeEEcCC--CcEEEEEEC---cCCC-CCEEEEECCCCCCCCC-HHHHh------------cc--C----ccCCEEEEEC
Confidence 47888864 567877543 2223 3446889999998665 21110 00 0 1347899999
Q ss_pred CCCccCCCCcCCCCCCcccChHHhHHHHHHHHHHHHHHCCCCCCCCeEEEcccccc---------cccCcceeeeecccc
Q 012876 134 APVGVGFSYTNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAD---------SFINLKGFMIGNAVI 204 (454)
Q Consensus 134 qPvGtGfSy~~~~~~~~~~~~~~~A~~~~~fL~~f~~~fp~~~~~~~yI~GESYgG---------~~inLkGi~iGng~~ 204 (454)
.| |.|.|..... .+. .+.++.++++..++ +.. .-.++++.|+|||| .+-.++++++.+..+
T Consensus 61 ~~-G~G~S~~~~~-~~~-~~~~~~~~dl~~l~----~~l---~~~~~~lvG~S~GG~ia~~~a~~~p~~v~~lvl~~~~~ 130 (306)
T TIGR01249 61 QR-GCGKSTPHAC-LEE-NTTWDLVADIEKLR----EKL---GIKNWLVFGGSWGSTLALAYAQTHPEVVTGLVLRGIFL 130 (306)
T ss_pred CC-CCCCCCCCCC-ccc-CCHHHHHHHHHHHH----HHc---CCCCEEEEEECHHHHHHHHHHHHChHhhhhheeecccc
Confidence 76 9999964322 111 13445555554444 322 23478999999999 344689999988776
Q ss_pred cC
Q 012876 205 ND 206 (454)
Q Consensus 205 ~p 206 (454)
..
T Consensus 131 ~~ 132 (306)
T TIGR01249 131 LR 132 (306)
T ss_pred CC
Confidence 43
No 37
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=98.56 E-value=1.5e-06 Score=81.92 Aligned_cols=90 Identities=19% Similarity=0.280 Sum_probs=62.3
Q ss_pred CCeEEEeCCCCCchhhchhhhhhcCCeEEcCCCCcccccCCCcccccceEEEeCCCccCCCCcCCCCCCcccChHHhHHH
Q 012876 81 KPLVLWLNGGPGCSSIAYGAAQELGPFLVGGNGSRLKFNKYSWNKAANMLFLEAPVGVGFSYTNNSEDLHKLGDQVTAND 160 (454)
Q Consensus 81 ~PlilWlnGGPG~SS~~~g~f~E~GP~~~~~~~~~l~~N~~sW~~~anvlyIDqPvGtGfSy~~~~~~~~~~~~~~~A~~ 160 (454)
.|.||.+.|.+|++.. |-.+.+. + +..+++.+|.| |.|.|.... . . +-++.+++
T Consensus 2 ~p~vvllHG~~~~~~~-w~~~~~~-----------l--------~~~~vi~~D~~-G~G~S~~~~--~--~-~~~~~~~~ 55 (242)
T PRK11126 2 LPWLVFLHGLLGSGQD-WQPVGEA-----------L--------PDYPRLYIDLP-GHGGSAAIS--V--D-GFADVSRL 55 (242)
T ss_pred CCEEEEECCCCCChHH-HHHHHHH-----------c--------CCCCEEEecCC-CCCCCCCcc--c--c-CHHHHHHH
Confidence 5889999999998877 5443321 1 13789999965 999885321 1 1 45566777
Q ss_pred HHHHHHHHHHHCCCCCCCCeEEEcccccc---------cccC-cceeeeeccc
Q 012876 161 SYAFLIGWFKRFPNFKSHDFYIAGESYAD---------SFIN-LKGFMIGNAV 203 (454)
Q Consensus 161 ~~~fL~~f~~~fp~~~~~~~yI~GESYgG---------~~in-LkGi~iGng~ 203 (454)
+.++|.. +.-.+++++|+|+|| ..-. +++++|.++.
T Consensus 56 l~~~l~~-------~~~~~~~lvG~S~Gg~va~~~a~~~~~~~v~~lvl~~~~ 101 (242)
T PRK11126 56 LSQTLQS-------YNILPYWLVGYSLGGRIAMYYACQGLAGGLCGLIVEGGN 101 (242)
T ss_pred HHHHHHH-------cCCCCeEEEEECHHHHHHHHHHHhCCcccccEEEEeCCC
Confidence 6666543 234689999999999 2233 8999998765
No 38
>PRK10749 lysophospholipase L2; Provisional
Probab=98.55 E-value=1.2e-05 Score=80.09 Aligned_cols=116 Identities=13% Similarity=0.019 Sum_probs=74.9
Q ss_pred CceeEEEEEEecCCCCCCCeEEEeCCCCCchhhchhhhhhcCCeEEcCCCCcccccCCCcccccceEEEeCCCccCCCCc
Q 012876 64 HKALFYWFFEAQKGVSSKPLVLWLNGGPGCSSIAYGAAQELGPFLVGGNGSRLKFNKYSWNKAANMLFLEAPVGVGFSYT 143 (454)
Q Consensus 64 ~~~lfy~f~es~~~~~~~PlilWlnGGPG~SS~~~g~f~E~GP~~~~~~~~~l~~N~~sW~~~anvlyIDqPvGtGfSy~ 143 (454)
+..++|+.+... ..+|+||.+.|-.+.+.. |.-+. +. +. .+-.+++-+|.| |.|.|..
T Consensus 40 g~~l~~~~~~~~---~~~~~vll~HG~~~~~~~-y~~~~---~~--------l~------~~g~~v~~~D~~-G~G~S~~ 97 (330)
T PRK10749 40 DIPIRFVRFRAP---HHDRVVVICPGRIESYVK-YAELA---YD--------LF------HLGYDVLIIDHR-GQGRSGR 97 (330)
T ss_pred CCEEEEEEccCC---CCCcEEEEECCccchHHH-HHHHH---HH--------HH------HCCCeEEEEcCC-CCCCCCC
Confidence 567888887642 456889999988655444 32222 10 11 123688999976 9999853
Q ss_pred CCCC---CCcccChHHhHHHHHHHHHHHHHHCCCCCCCCeEEEcccccc---------cccCcceeeeeccccc
Q 012876 144 NNSE---DLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAD---------SFINLKGFMIGNAVIN 205 (454)
Q Consensus 144 ~~~~---~~~~~~~~~~A~~~~~fL~~f~~~fp~~~~~~~yI~GESYgG---------~~inLkGi~iGng~~~ 205 (454)
.... ... .+-+..++++..+++.....+ ...++++.|+|+|| .+-.++|+++.+|...
T Consensus 98 ~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~---~~~~~~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~p~~~ 167 (330)
T PRK10749 98 LLDDPHRGHV-ERFNDYVDDLAAFWQQEIQPG---PYRKRYALAHSMGGAILTLFLQRHPGVFDAIALCAPMFG 167 (330)
T ss_pred CCCCCCcCcc-ccHHHHHHHHHHHHHHHHhcC---CCCCeEEEEEcHHHHHHHHHHHhCCCCcceEEEECchhc
Confidence 2211 011 145567778777777655433 35689999999999 3445899999998764
No 39
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=98.52 E-value=1.7e-06 Score=80.47 Aligned_cols=96 Identities=21% Similarity=0.312 Sum_probs=60.6
Q ss_pred CCeEEEeCCCCCchhhchhhhhhcCCeEEcCCCCcccccCCCcccccceEEEeCCCccCCCCcCCCCCCcccChHHhHHH
Q 012876 81 KPLVLWLNGGPGCSSIAYGAAQELGPFLVGGNGSRLKFNKYSWNKAANMLFLEAPVGVGFSYTNNSEDLHKLGDQVTAND 160 (454)
Q Consensus 81 ~PlilWlnGGPG~SS~~~g~f~E~GP~~~~~~~~~l~~N~~sW~~~anvlyIDqPvGtGfSy~~~~~~~~~~~~~~~A~~ 160 (454)
+|.||.+.|.+|.+.. |-.+.+ .| + +..+++-+|.| |.|.|........ .+.++.+++
T Consensus 1 ~~~vv~~hG~~~~~~~-~~~~~~-----------~L-----~--~~~~v~~~d~~-g~G~s~~~~~~~~--~~~~~~~~~ 58 (251)
T TIGR03695 1 KPVLVFLHGFLGSGAD-WQALIE-----------LL-----G--PHFRCLAIDLP-GHGSSQSPDEIER--YDFEEAAQD 58 (251)
T ss_pred CCEEEEEcCCCCchhh-HHHHHH-----------Hh-----c--ccCeEEEEcCC-CCCCCCCCCccCh--hhHHHHHHH
Confidence 4789999999888776 533221 11 1 23689999966 8888854321111 144445555
Q ss_pred HHHHHHHHHHHCCCCCCCCeEEEcccccc---------cccCcceeeeecccc
Q 012876 161 SYAFLIGWFKRFPNFKSHDFYIAGESYAD---------SFINLKGFMIGNAVI 204 (454)
Q Consensus 161 ~~~fL~~f~~~fp~~~~~~~yI~GESYgG---------~~inLkGi~iGng~~ 204 (454)
+ +..+.+.. ..++++|.|+|+|| .+-.++++++.++..
T Consensus 59 ~---~~~~~~~~---~~~~~~l~G~S~Gg~ia~~~a~~~~~~v~~lil~~~~~ 105 (251)
T TIGR03695 59 I---LATLLDQL---GIEPFFLVGYSMGGRIALYYALQYPERVQGLILESGSP 105 (251)
T ss_pred H---HHHHHHHc---CCCeEEEEEeccHHHHHHHHHHhCchheeeeEEecCCC
Confidence 2 22333322 35689999999999 345689999988754
No 40
>PRK07581 hypothetical protein; Validated
Probab=98.42 E-value=2.9e-05 Score=77.45 Aligned_cols=59 Identities=14% Similarity=0.099 Sum_probs=52.5
Q ss_pred CCeEEEEecCCCcccCchHHHHHHHHcCCCCccceeeceeCCeEeEEEEEeecCeEEEEEcC-CccccccCChHHHHHHH
Q 012876 362 GLRIWVYSGDTDGRVPVTSTRYSINKMGLKIKEEWRAWFHKHQVAGWVETYEKGLTLVTVRG-AGHQVPAFAPAQSLSLF 440 (454)
Q Consensus 362 ~~rVliy~Gd~D~i~~~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~Gy~~~~~~~Ltf~~V~g-AGHmvP~dqP~~a~~~i 440 (454)
.++|||..|+.|.+++....+.+.+.+. +..+++|.+ +||+++.+||+....+|
T Consensus 275 ~~PtLvI~G~~D~~~p~~~~~~l~~~ip-------------------------~a~l~~i~~~~GH~~~~~~~~~~~~~~ 329 (339)
T PRK07581 275 TAKTFVMPISTDLYFPPEDCEAEAALIP-------------------------NAELRPIESIWGHLAGFGQNPADIAFI 329 (339)
T ss_pred CCCEEEEEeCCCCCCCHHHHHHHHHhCC-------------------------CCeEEEeCCCCCccccccCcHHHHHHH
Confidence 7899999999999999988887766643 667788998 99999999999999999
Q ss_pred HHHHc
Q 012876 441 TKFLS 445 (454)
Q Consensus 441 ~~fl~ 445 (454)
++|+.
T Consensus 330 ~~~~~ 334 (339)
T PRK07581 330 DAALK 334 (339)
T ss_pred HHHHH
Confidence 99985
No 41
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=98.37 E-value=5.9e-06 Score=89.14 Aligned_cols=114 Identities=18% Similarity=0.269 Sum_probs=70.7
Q ss_pred EEecCCCCceeEEEEEEecC-CC-CCCCeEEEeCCCCCchhhchhhhhhcCCeEEcCCCCcccccCCC-cccccceEEEe
Q 012876 57 VKLRPNDHKALFYWFFEAQK-GV-SSKPLVLWLNGGPGCSSIAYGAAQELGPFLVGGNGSRLKFNKYS-WNKAANMLFLE 133 (454)
Q Consensus 57 l~v~~~~~~~lfy~f~es~~-~~-~~~PlilWlnGGPG~SS~~~g~f~E~GP~~~~~~~~~l~~N~~s-W~~~anvlyID 133 (454)
+.+....|..+..|++.-.. ++ +.-|+|+++.||| +++ +|. ....+.-. +.+-..||+++
T Consensus 368 ~~~~~~dG~~i~~~l~~P~~~~~~k~yP~i~~~hGGP--~~~-~~~--------------~~~~~~q~~~~~G~~V~~~n 430 (620)
T COG1506 368 VTYKSNDGETIHGWLYKPPGFDPRKKYPLIVYIHGGP--SAQ-VGY--------------SFNPEIQVLASAGYAVLAPN 430 (620)
T ss_pred EEEEcCCCCEEEEEEecCCCCCCCCCCCEEEEeCCCC--ccc-ccc--------------ccchhhHHHhcCCeEEEEeC
Confidence 33333346789999887654 22 2359999999999 666 340 11111111 24457899999
Q ss_pred CCCccCCCCcCCCCCCcccChHHhHHHHHHHHHHHHHHCCCCCCCCeEEEcccccc
Q 012876 134 APVGVGFSYTNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAD 189 (454)
Q Consensus 134 qPvGtGfSy~~~~~~~~~~~~~~~A~~~~~fL~~f~~~fp~~~~~~~yI~GESYgG 189 (454)
.---+||+..=....... -=....+|+..++. |+.+.|..-..++.|+|.||||
T Consensus 431 ~RGS~GyG~~F~~~~~~~-~g~~~~~D~~~~~~-~l~~~~~~d~~ri~i~G~SyGG 484 (620)
T COG1506 431 YRGSTGYGREFADAIRGD-WGGVDLEDLIAAVD-ALVKLPLVDPERIGITGGSYGG 484 (620)
T ss_pred CCCCCccHHHHHHhhhhc-cCCccHHHHHHHHH-HHHhCCCcChHHeEEeccChHH
Confidence 443445443211111100 11235788888888 8899998888899999999998
No 42
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=98.35 E-value=1.9e-05 Score=79.03 Aligned_cols=61 Identities=18% Similarity=0.157 Sum_probs=52.3
Q ss_pred CCeEEEEecCCCcccCchHHHHHHHHcCCCCccceeeceeCCeEeEEEEEeecCeEEEEEcC-CccccccCChHHHHHHH
Q 012876 362 GLRIWVYSGDTDGRVPVTSTRYSINKMGLKIKEEWRAWFHKHQVAGWVETYEKGLTLVTVRG-AGHQVPAFAPAQSLSLF 440 (454)
Q Consensus 362 ~~rVliy~Gd~D~i~~~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~Gy~~~~~~~Ltf~~V~g-AGHmvP~dqP~~a~~~i 440 (454)
..++||..|+.|.+++....+...+.+. . +-.+++|.+ +||+++.++|++...+|
T Consensus 277 ~~PtLvi~G~~D~~~p~~~~~~~~~~i~-----------------------p-~a~l~~i~~~aGH~~~lE~Pe~~~~~l 332 (343)
T PRK08775 277 RVPTVVVAVEGDRLVPLADLVELAEGLG-----------------------P-RGSLRVLRSPYGHDAFLKETDRIDAIL 332 (343)
T ss_pred CCCeEEEEeCCCEeeCHHHHHHHHHHcC-----------------------C-CCeEEEEeCCccHHHHhcCHHHHHHHH
Confidence 6899999999999999888777777642 1 566788875 99999999999999999
Q ss_pred HHHHcC
Q 012876 441 TKFLSA 446 (454)
Q Consensus 441 ~~fl~~ 446 (454)
++|+..
T Consensus 333 ~~FL~~ 338 (343)
T PRK08775 333 TTALRS 338 (343)
T ss_pred HHHHHh
Confidence 999964
No 43
>PLN02965 Probable pheophorbidase
Probab=98.30 E-value=1.3e-05 Score=76.53 Aligned_cols=59 Identities=7% Similarity=-0.000 Sum_probs=51.7
Q ss_pred CCeEEEEecCCCcccCchHHHHHHHHcCCCCccceeeceeCCeEeEEEEEeecCeEEEEEcCCccccccCChHHHHHHHH
Q 012876 362 GLRIWVYSGDTDGRVPVTSTRYSINKMGLKIKEEWRAWFHKHQVAGWVETYEKGLTLVTVRGAGHQVPAFAPAQSLSLFT 441 (454)
Q Consensus 362 ~~rVliy~Gd~D~i~~~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~Gy~~~~~~~Ltf~~V~gAGHmvP~dqP~~a~~~i~ 441 (454)
.+++++..|..|.+++....+...+.+. +-+++.+.++||+...++|+...++|.
T Consensus 193 ~vP~lvi~g~~D~~~~~~~~~~~~~~~~-------------------------~a~~~~i~~~GH~~~~e~p~~v~~~l~ 247 (255)
T PLN02965 193 KVPRVYIKTAKDNLFDPVRQDVMVENWP-------------------------PAQTYVLEDSDHSAFFSVPTTLFQYLL 247 (255)
T ss_pred CCCEEEEEcCCCCCCCHHHHHHHHHhCC-------------------------cceEEEecCCCCchhhcCHHHHHHHHH
Confidence 7999999999999999977776666643 667788999999999999999999999
Q ss_pred HHHc
Q 012876 442 KFLS 445 (454)
Q Consensus 442 ~fl~ 445 (454)
+|+.
T Consensus 248 ~~~~ 251 (255)
T PLN02965 248 QAVS 251 (255)
T ss_pred HHHH
Confidence 9975
No 44
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=98.29 E-value=2.7e-05 Score=92.42 Aligned_cols=98 Identities=18% Similarity=0.223 Sum_probs=66.0
Q ss_pred CCCCCeEEEeCCCCCchhhchhhhhhcCCeEEcCCCCcccccCCCcccccceEEEeCCCccCCCCcCCC-----CCCccc
Q 012876 78 VSSKPLVLWLNGGPGCSSIAYGAAQELGPFLVGGNGSRLKFNKYSWNKAANMLFLEAPVGVGFSYTNNS-----EDLHKL 152 (454)
Q Consensus 78 ~~~~PlilWlnGGPG~SS~~~g~f~E~GP~~~~~~~~~l~~N~~sW~~~anvlyIDqPvGtGfSy~~~~-----~~~~~~ 152 (454)
.++.|.||+|+|.+|++.. |-.+.+ .+ .+..++|.+|.| |.|.|..... .... .
T Consensus 1368 ~~~~~~vVllHG~~~s~~~-w~~~~~-----------~L-------~~~~rVi~~Dl~-G~G~S~~~~~~~~~~~~~~-~ 1426 (1655)
T PLN02980 1368 NAEGSVVLFLHGFLGTGED-WIPIMK-----------AI-------SGSARCISIDLP-GHGGSKIQNHAKETQTEPT-L 1426 (1655)
T ss_pred CCCCCeEEEECCCCCCHHH-HHHHHH-----------HH-------hCCCEEEEEcCC-CCCCCCCcccccccccccc-C
Confidence 4567899999999999887 544332 11 123689999976 9898864321 0111 1
Q ss_pred ChHHhHHHHHHHHHHHHHHCCCCCCCCeEEEcccccc---------cccCcceeeeeccc
Q 012876 153 GDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAD---------SFINLKGFMIGNAV 203 (454)
Q Consensus 153 ~~~~~A~~~~~fL~~f~~~fp~~~~~~~yI~GESYgG---------~~inLkGi~iGng~ 203 (454)
+.+..++++.+++.. +...+++|.|+|+|| .+-.++++++.++.
T Consensus 1427 si~~~a~~l~~ll~~-------l~~~~v~LvGhSmGG~iAl~~A~~~P~~V~~lVlis~~ 1479 (1655)
T PLN02980 1427 SVELVADLLYKLIEH-------ITPGKVTLVGYSMGARIALYMALRFSDKIEGAVIISGS 1479 (1655)
T ss_pred CHHHHHHHHHHHHHH-------hCCCCEEEEEECHHHHHHHHHHHhChHhhCEEEEECCC
Confidence 455667776666553 234589999999999 34568999988764
No 45
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=98.19 E-value=6.9e-05 Score=76.08 Aligned_cols=64 Identities=17% Similarity=0.159 Sum_probs=52.2
Q ss_pred CCeEEEEecCCCcccCchHHHHHHHHcCCCCccceeeceeCCeEeEEEEEeecCeEEEEEc-CCccccccCChHHHHHHH
Q 012876 362 GLRIWVYSGDTDGRVPVTSTRYSINKMGLKIKEEWRAWFHKHQVAGWVETYEKGLTLVTVR-GAGHQVPAFAPAQSLSLF 440 (454)
Q Consensus 362 ~~rVliy~Gd~D~i~~~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~Gy~~~~~~~Ltf~~V~-gAGHmvP~dqP~~a~~~i 440 (454)
..|+||..|+.|.++|....+.....+.= .++..+++.|. ++||+.+.++|++..+.|
T Consensus 309 ~~PtLvI~G~~D~~~p~~~~~~la~~i~~---------------------a~~~~~l~~i~~~~GH~~~le~p~~~~~~L 367 (379)
T PRK00175 309 KARFLVVSFTSDWLFPPARSREIVDALLA---------------------AGADVSYAEIDSPYGHDAFLLDDPRYGRLV 367 (379)
T ss_pred CCCEEEEEECCccccCHHHHHHHHHHHHh---------------------cCCCeEEEEeCCCCCchhHhcCHHHHHHHH
Confidence 78999999999999999888776665430 11134778886 999999999999999999
Q ss_pred HHHHcC
Q 012876 441 TKFLSA 446 (454)
Q Consensus 441 ~~fl~~ 446 (454)
.+|+.+
T Consensus 368 ~~FL~~ 373 (379)
T PRK00175 368 RAFLER 373 (379)
T ss_pred HHHHHh
Confidence 999965
No 46
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=98.17 E-value=9.7e-05 Score=73.62 Aligned_cols=62 Identities=16% Similarity=0.176 Sum_probs=51.1
Q ss_pred CCeEEEEecCCCcccCchHHHHHHHHcCCCCccceeeceeCCeEeEEEEEeecCeEEEEEcCCccccccCC-hHHHHHHH
Q 012876 362 GLRIWVYSGDTDGRVPVTSTRYSINKMGLKIKEEWRAWFHKHQVAGWVETYEKGLTLVTVRGAGHQVPAFA-PAQSLSLF 440 (454)
Q Consensus 362 ~~rVliy~Gd~D~i~~~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~Gy~~~~~~~Ltf~~V~gAGHmvP~dq-P~~a~~~i 440 (454)
.+++|+.+|+.|.+++..+++.+.+++.- . +-++..+.+++|++..+. ++.+++.+
T Consensus 270 ~~P~Lii~G~~D~vv~~~~~~~~~~~~~~----------------------~-~~~l~~~~g~~H~i~~E~~~~~v~~~i 326 (332)
T TIGR01607 270 DIPILFIHSKGDCVCSYEGTVSFYNKLSI----------------------S-NKELHTLEDMDHVITIEPGNEEVLKKI 326 (332)
T ss_pred CCCEEEEEeCCCCccCHHHHHHHHHhccC----------------------C-CcEEEEECCCCCCCccCCCHHHHHHHH
Confidence 58999999999999999999988776431 1 456677899999999885 67888989
Q ss_pred HHHHcC
Q 012876 441 TKFLSA 446 (454)
Q Consensus 441 ~~fl~~ 446 (454)
.+||.+
T Consensus 327 ~~wL~~ 332 (332)
T TIGR01607 327 IEWISN 332 (332)
T ss_pred HHHhhC
Confidence 999864
No 47
>PLN02511 hydrolase
Probab=98.13 E-value=2.7e-05 Score=79.36 Aligned_cols=108 Identities=18% Similarity=0.174 Sum_probs=65.6
Q ss_pred EeEEecCCCCceeEEEEEEe--cCCCCCCCeEEEeCCCCCchhhch-hhhhhcCCeEEcCCCCcccccCCCcccccceEE
Q 012876 55 GYVKLRPNDHKALFYWFFEA--QKGVSSKPLVLWLNGGPGCSSIAY-GAAQELGPFLVGGNGSRLKFNKYSWNKAANMLF 131 (454)
Q Consensus 55 Gyl~v~~~~~~~lfy~f~es--~~~~~~~PlilWlnGGPG~SS~~~-g~f~E~GP~~~~~~~~~l~~N~~sW~~~anvly 131 (454)
-++...+ |..+.+..+.. ...+.++|+||.|.|..|+|...| -.+.+ .+ -.+-.+++-
T Consensus 74 e~l~~~D--G~~~~ldw~~~~~~~~~~~~p~vvllHG~~g~s~~~y~~~~~~-----------~~------~~~g~~vv~ 134 (388)
T PLN02511 74 ECLRTPD--GGAVALDWVSGDDRALPADAPVLILLPGLTGGSDDSYVRHMLL-----------RA------RSKGWRVVV 134 (388)
T ss_pred EEEECCC--CCEEEEEecCcccccCCCCCCEEEEECCCCCCCCCHHHHHHHH-----------HH------HHCCCEEEE
Confidence 3555543 45555543332 123567899999999999874211 11110 00 123468899
Q ss_pred EeCCCccCCCCcCCCCCCcccChHHhHHHHHHHHHHHHHHCCCCCCCCeEEEcccccc
Q 012876 132 LEAPVGVGFSYTNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAD 189 (454)
Q Consensus 132 IDqPvGtGfSy~~~~~~~~~~~~~~~A~~~~~fL~~f~~~fp~~~~~~~yI~GESYgG 189 (454)
+|.| |.|-|.......+ ....++|+.++++..-.++| +.++++.|+|.||
T Consensus 135 ~d~r-G~G~s~~~~~~~~----~~~~~~Dl~~~i~~l~~~~~---~~~~~lvG~SlGg 184 (388)
T PLN02511 135 FNSR-GCADSPVTTPQFY----SASFTGDLRQVVDHVAGRYP---SANLYAAGWSLGA 184 (388)
T ss_pred EecC-CCCCCCCCCcCEE----cCCchHHHHHHHHHHHHHCC---CCCEEEEEechhH
Confidence 9976 8888754322222 23456677777776666666 4689999999999
No 48
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.08 E-value=9.3e-05 Score=73.37 Aligned_cols=60 Identities=25% Similarity=0.362 Sum_probs=53.5
Q ss_pred CCeEEEEecCCCcccCchHHHHHHHHcCCCCccceeeceeCCeEeEEEEEeecCeEEEEEcCCccccccCChHHHHHHHH
Q 012876 362 GLRIWVYSGDTDGRVPVTSTRYSINKMGLKIKEEWRAWFHKHQVAGWVETYEKGLTLVTVRGAGHQVPAFAPAQSLSLFT 441 (454)
Q Consensus 362 ~~rVliy~Gd~D~i~~~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~Gy~~~~~~~Ltf~~V~gAGHmvP~dqP~~a~~~i~ 441 (454)
+.+|||..|+.|.+++....+...+++. |..+..|.++||-+..++|++....|.
T Consensus 264 ~~pvlii~G~~D~~~p~~~~~~~~~~~p-------------------------n~~~~~I~~~gH~~h~e~Pe~~~~~i~ 318 (326)
T KOG1454|consen 264 KCPVLIIWGDKDQIVPLELAEELKKKLP-------------------------NAELVEIPGAGHLPHLERPEEVAALLR 318 (326)
T ss_pred CCceEEEEcCcCCccCHHHHHHHHhhCC-------------------------CceEEEeCCCCcccccCCHHHHHHHHH
Confidence 4889999999999999997776666643 899999999999999999999999999
Q ss_pred HHHcC
Q 012876 442 KFLSA 446 (454)
Q Consensus 442 ~fl~~ 446 (454)
.|+..
T Consensus 319 ~Fi~~ 323 (326)
T KOG1454|consen 319 SFIAR 323 (326)
T ss_pred HHHHH
Confidence 99964
No 49
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=98.06 E-value=2.3e-05 Score=72.49 Aligned_cols=56 Identities=20% Similarity=0.234 Sum_probs=49.0
Q ss_pred cCCeEEEEecCCCcccCchHHHHHHHHcCCCCccceeeceeCCeEeEEEEEeecCeEEEEEcCCccccccCChHHHHHHH
Q 012876 361 AGLRIWVYSGDTDGRVPVTSTRYSINKMGLKIKEEWRAWFHKHQVAGWVETYEKGLTLVTVRGAGHQVPAFAPAQSLSLF 440 (454)
Q Consensus 361 ~~~rVliy~Gd~D~i~~~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~Gy~~~~~~~Ltf~~V~gAGHmvP~dqP~~a~~~i 440 (454)
-.+++++.+|..|.++|....+...+.+. +..++.+.++||+...+.|++..++|
T Consensus 174 i~~p~l~i~~~~D~~~p~~~~~~~~~~~~-------------------------~~~~~~~~~~GH~~~~~~~~~~~~~i 228 (230)
T PF00561_consen 174 IKVPTLIIWGEDDPLVPPESSEQLAKLIP-------------------------NSQLVLIEGSGHFAFLEGPDEFNEII 228 (230)
T ss_dssp TTSEEEEEEETTCSSSHHHHHHHHHHHST-------------------------TEEEEEETTCCSTHHHHSHHHHHHHH
T ss_pred cCCCeEEEEeCCCCCCCHHHHHHHHHhcC-------------------------CCEEEECCCCChHHHhcCHHhhhhhh
Confidence 37999999999999999998888666644 77889999999999999999988877
Q ss_pred H
Q 012876 441 T 441 (454)
Q Consensus 441 ~ 441 (454)
.
T Consensus 229 ~ 229 (230)
T PF00561_consen 229 I 229 (230)
T ss_dssp H
T ss_pred c
Confidence 5
No 50
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=98.03 E-value=0.00015 Score=71.05 Aligned_cols=128 Identities=16% Similarity=0.125 Sum_probs=85.7
Q ss_pred eEEEeEEecCCCCceeEEEEEEecCCCCCCCeEEEeCCCCCchhhchhhhhhcCCeEEcCCCCcccccCCCcccccceEE
Q 012876 52 HYAGYVKLRPNDHKALFYWFFEAQKGVSSKPLVLWLNGGPGCSSIAYGAAQELGPFLVGGNGSRLKFNKYSWNKAANMLF 131 (454)
Q Consensus 52 ~~sGyl~v~~~~~~~lfy~f~es~~~~~~~PlilWlnGGPG~SS~~~g~f~E~GP~~~~~~~~~l~~N~~sW~~~anvly 131 (454)
.--|+....+ +..++|+.++..+++. -+|++++|.=.++.- |-.+.+. +..+ =..|+=
T Consensus 9 ~~~~~~~~~d--~~~~~~~~~~~~~~~~--g~Vvl~HG~~Eh~~r-y~~la~~-----------l~~~------G~~V~~ 66 (298)
T COG2267 9 RTEGYFTGAD--GTRLRYRTWAAPEPPK--GVVVLVHGLGEHSGR-YEELADD-----------LAAR------GFDVYA 66 (298)
T ss_pred cccceeecCC--CceEEEEeecCCCCCC--cEEEEecCchHHHHH-HHHHHHH-----------HHhC------CCEEEE
Confidence 4455655543 5789999988765444 899999998777665 5443321 1111 256788
Q ss_pred EeCCCccCCCC-cCCCCCCcccChHHhHHHHHHHHHHHHHHCCCCCCCCeEEEcccccc---------cccCcceeeeec
Q 012876 132 LEAPVGVGFSY-TNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAD---------SFINLKGFMIGN 201 (454)
Q Consensus 132 IDqPvGtGfSy-~~~~~~~~~~~~~~~A~~~~~fL~~f~~~fp~~~~~~~yI~GESYgG---------~~inLkGi~iGn 201 (454)
+|+| |.|.|. .... ... +-.+...|+..|++..-... ...|+||+|+|.|| ..-+++|++|-+
T Consensus 67 ~D~R-GhG~S~r~~rg--~~~-~f~~~~~dl~~~~~~~~~~~---~~~p~~l~gHSmGg~Ia~~~~~~~~~~i~~~vLss 139 (298)
T COG2267 67 LDLR-GHGRSPRGQRG--HVD-SFADYVDDLDAFVETIAEPD---PGLPVFLLGHSMGGLIALLYLARYPPRIDGLVLSS 139 (298)
T ss_pred ecCC-CCCCCCCCCcC--Cch-hHHHHHHHHHHHHHHHhccC---CCCCeEEEEeCcHHHHHHHHHHhCCccccEEEEEC
Confidence 9987 999997 3222 111 33445556556565544433 35699999999999 457899999999
Q ss_pred ccccCCC
Q 012876 202 AVINDPT 208 (454)
Q Consensus 202 g~~~p~~ 208 (454)
|++....
T Consensus 140 P~~~l~~ 146 (298)
T COG2267 140 PALGLGG 146 (298)
T ss_pred ccccCCh
Confidence 9987664
No 51
>PRK05855 short chain dehydrogenase; Validated
Probab=97.95 E-value=0.00064 Score=72.60 Aligned_cols=94 Identities=14% Similarity=0.168 Sum_probs=63.8
Q ss_pred CceeEEEEEEecCCCCCCCeEEEeCCCCCchhhchhhhhhcCCeEEcCCCCcccccCCCcccccceEEEeCCCccCCCCc
Q 012876 64 HKALFYWFFEAQKGVSSKPLVLWLNGGPGCSSIAYGAAQELGPFLVGGNGSRLKFNKYSWNKAANMLFLEAPVGVGFSYT 143 (454)
Q Consensus 64 ~~~lfy~f~es~~~~~~~PlilWlnGGPG~SS~~~g~f~E~GP~~~~~~~~~l~~N~~sW~~~anvlyIDqPvGtGfSy~ 143 (454)
+..+.|+-+. +.+.|.||.+.|.++.+.. |.-+.+. | .+..+|+.+|.| |.|.|..
T Consensus 12 g~~l~~~~~g----~~~~~~ivllHG~~~~~~~-w~~~~~~-----------L-------~~~~~Vi~~D~~-G~G~S~~ 67 (582)
T PRK05855 12 GVRLAVYEWG----DPDRPTVVLVHGYPDNHEV-WDGVAPL-----------L-------ADRFRVVAYDVR-GAGRSSA 67 (582)
T ss_pred CEEEEEEEcC----CCCCCeEEEEcCCCchHHH-HHHHHHH-----------h-------hcceEEEEecCC-CCCCCCC
Confidence 5567776542 2347899999999877776 5544321 1 123689999976 9999975
Q ss_pred CCCCCCcccChHHhHHHHHHHHHHHHHHCCCCCCCCeEEEcccccc
Q 012876 144 NNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAD 189 (454)
Q Consensus 144 ~~~~~~~~~~~~~~A~~~~~fL~~f~~~fp~~~~~~~yI~GESYgG 189 (454)
..... .++.+..++|+..+++..- ..++++|+|+|+||
T Consensus 68 ~~~~~--~~~~~~~a~dl~~~i~~l~------~~~~~~lvGhS~Gg 105 (582)
T PRK05855 68 PKRTA--AYTLARLADDFAAVIDAVS------PDRPVHLLAHDWGS 105 (582)
T ss_pred CCccc--ccCHHHHHHHHHHHHHHhC------CCCcEEEEecChHH
Confidence 43221 1267778888888887531 13469999999999
No 52
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=97.94 E-value=0.00054 Score=66.28 Aligned_cols=70 Identities=19% Similarity=0.169 Sum_probs=50.3
Q ss_pred cceEEEeCCCccCCCCcCCCCCCcccChHHhHHHHHHHHHHHHHHCCCCCCCCeEEEcccccc--------cccCcceee
Q 012876 127 ANMLFLEAPVGVGFSYTNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAD--------SFINLKGFM 198 (454)
Q Consensus 127 anvlyIDqPvGtGfSy~~~~~~~~~~~~~~~A~~~~~fL~~f~~~fp~~~~~~~yI~GESYgG--------~~inLkGi~ 198 (454)
.+++-+|.| |.|-|.... . +-+...+|+..+++.+-+..|.+ .+++++|+|.|| ..-.++|++
T Consensus 58 ~~v~~~Dl~-G~G~S~~~~----~--~~~~~~~d~~~~~~~l~~~~~g~--~~i~l~G~S~Gg~~a~~~a~~~~~v~~li 128 (274)
T TIGR03100 58 FPVLRFDYR-GMGDSEGEN----L--GFEGIDADIAAAIDAFREAAPHL--RRIVAWGLCDAASAALLYAPADLRVAGLV 128 (274)
T ss_pred CEEEEeCCC-CCCCCCCCC----C--CHHHHHHHHHHHHHHHHhhCCCC--CcEEEEEECHHHHHHHHHhhhCCCccEEE
Confidence 688999976 999885321 1 33445677777777665555543 359999999999 225799999
Q ss_pred eeccccc
Q 012876 199 IGNAVIN 205 (454)
Q Consensus 199 iGng~~~ 205 (454)
+.||++.
T Consensus 129 l~~p~~~ 135 (274)
T TIGR03100 129 LLNPWVR 135 (274)
T ss_pred EECCccC
Confidence 9999854
No 53
>PRK10985 putative hydrolase; Provisional
Probab=97.86 E-value=0.0013 Score=65.18 Aligned_cols=46 Identities=7% Similarity=-0.114 Sum_probs=35.8
Q ss_pred CCeEEEEecCCCcccCchHHHHHHHHcCCCCccceeeceeCCeEeEEEEEeecCeEEEEEcCCccccccCC
Q 012876 362 GLRIWVYSGDTDGRVPVTSTRYSINKMGLKIKEEWRAWFHKHQVAGWVETYEKGLTLVTVRGAGHQVPAFA 432 (454)
Q Consensus 362 ~~rVliy~Gd~D~i~~~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~Gy~~~~~~~Ltf~~V~gAGHmvP~dq 432 (454)
.++++|.+|+.|.+++....+..... .. ++.++.+.++||+.+.+.
T Consensus 255 ~~P~lii~g~~D~~~~~~~~~~~~~~------------------------~~-~~~~~~~~~~GH~~~~~g 300 (324)
T PRK10985 255 RKPTLIIHAKDDPFMTHEVIPKPESL------------------------PP-NVEYQLTEHGGHVGFVGG 300 (324)
T ss_pred CCCEEEEecCCCCCCChhhChHHHHh------------------------CC-CeEEEECCCCCceeeCCC
Confidence 68999999999999987655543222 12 788899999999988764
No 54
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=97.80 E-value=0.0015 Score=67.05 Aligned_cols=58 Identities=10% Similarity=-0.018 Sum_probs=46.4
Q ss_pred CCeEEEEecCCCcccCchHHHHHHHHcCCCCccceeeceeCCeEeEEEEEeecCeEEEEEcCCccccccCChHHHHHHHH
Q 012876 362 GLRIWVYSGDTDGRVPVTSTRYSINKMGLKIKEEWRAWFHKHQVAGWVETYEKGLTLVTVRGAGHQVPAFAPAQSLSLFT 441 (454)
Q Consensus 362 ~~rVliy~Gd~D~i~~~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~Gy~~~~~~~Ltf~~V~gAGHmvP~dqP~~a~~~i~ 441 (454)
.++||+.+|..|.+||....+.+..... +..++.+.++ |+ .++|+.++..+.
T Consensus 355 ~~PvLiI~G~~D~ivP~~~a~~l~~~~~-------------------------~~~l~~i~~~-~~--~e~~~~~~~~i~ 406 (414)
T PRK05077 355 PTPMLSGYWKNDPFSPEEDSRLIASSSA-------------------------DGKLLEIPFK-PV--YRNFDKALQEIS 406 (414)
T ss_pred CCcEEEEecCCCCCCCHHHHHHHHHhCC-------------------------CCeEEEccCC-Cc--cCCHHHHHHHHH
Confidence 5899999999999999999987655522 5566778887 43 369999999999
Q ss_pred HHHcCC
Q 012876 442 KFLSAA 447 (454)
Q Consensus 442 ~fl~~~ 447 (454)
+||..+
T Consensus 407 ~wL~~~ 412 (414)
T PRK05077 407 DWLEDR 412 (414)
T ss_pred HHHHHH
Confidence 999653
No 55
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=97.75 E-value=0.0025 Score=61.58 Aligned_cols=59 Identities=12% Similarity=-0.000 Sum_probs=48.6
Q ss_pred CCeEEEEecCCCcccCchHHHHHHHHcCCCCccceeeceeCCeEeEEEEEeecCeEEEEEcCCccccccCChHHHHHHHH
Q 012876 362 GLRIWVYSGDTDGRVPVTSTRYSINKMGLKIKEEWRAWFHKHQVAGWVETYEKGLTLVTVRGAGHQVPAFAPAQSLSLFT 441 (454)
Q Consensus 362 ~~rVliy~Gd~D~i~~~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~Gy~~~~~~~Ltf~~V~gAGHmvP~dqP~~a~~~i~ 441 (454)
.+|+++..|..|.++|..-.+..++.+. +-..+++. +||+.+..+|+...++|.
T Consensus 211 ~vP~l~I~g~~D~~ip~~~~~~m~~~~~-------------------------~~~~~~l~-~gH~p~ls~P~~~~~~i~ 264 (273)
T PLN02211 211 KVPRVYIKTLHDHVVKPEQQEAMIKRWP-------------------------PSQVYELE-SDHSPFFSTPFLLFGLLI 264 (273)
T ss_pred ccceEEEEeCCCCCCCHHHHHHHHHhCC-------------------------ccEEEEEC-CCCCccccCHHHHHHHHH
Confidence 5899999999999999987777776643 33556775 899999999999999998
Q ss_pred HHHcC
Q 012876 442 KFLSA 446 (454)
Q Consensus 442 ~fl~~ 446 (454)
+....
T Consensus 265 ~~a~~ 269 (273)
T PLN02211 265 KAAAS 269 (273)
T ss_pred HHHHH
Confidence 87654
No 56
>PLN02872 triacylglycerol lipase
Probab=97.72 E-value=0.00034 Score=71.16 Aligned_cols=61 Identities=21% Similarity=0.370 Sum_probs=49.6
Q ss_pred CCeEEEEecCCCcccCchHHHHHHHHcCCCCccceeeceeCCeEeEEEEEeecCeEEEEEcCCccc---cccCChHHHHH
Q 012876 362 GLRIWVYSGDTDGRVPVTSTRYSINKMGLKIKEEWRAWFHKHQVAGWVETYEKGLTLVTVRGAGHQ---VPAFAPAQSLS 438 (454)
Q Consensus 362 ~~rVliy~Gd~D~i~~~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~Gy~~~~~~~Ltf~~V~gAGHm---vP~dqP~~a~~ 438 (454)
+++|+|+.|..|.+++....+++.+.|.= ...+..+.++||+ ...+.|+..++
T Consensus 325 ~~Pv~i~~G~~D~lv~~~dv~~l~~~Lp~------------------------~~~l~~l~~~gH~dfi~~~eape~V~~ 380 (395)
T PLN02872 325 SLPLWMGYGGTDGLADVTDVEHTLAELPS------------------------KPELLYLENYGHIDFLLSTSAKEDVYN 380 (395)
T ss_pred CccEEEEEcCCCCCCCHHHHHHHHHHCCC------------------------ccEEEEcCCCCCHHHHhCcchHHHHHH
Confidence 58999999999999999999998888650 1244667899996 45588999999
Q ss_pred HHHHHHcC
Q 012876 439 LFTKFLSA 446 (454)
Q Consensus 439 ~i~~fl~~ 446 (454)
.|.+|+.+
T Consensus 381 ~Il~fL~~ 388 (395)
T PLN02872 381 HMIQFFRS 388 (395)
T ss_pred HHHHHHHH
Confidence 99989864
No 57
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=97.52 E-value=0.0012 Score=61.15 Aligned_cols=84 Identities=15% Similarity=0.100 Sum_probs=54.8
Q ss_pred cccceEEEeCCCccCCCCcCCCCCCcccChHHhHHHHHHHHHHHHHHCCCCCCCCeEEEcccccc---------cccCcc
Q 012876 125 KAANMLFLEAPVGVGFSYTNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAD---------SFINLK 195 (454)
Q Consensus 125 ~~anvlyIDqPvGtGfSy~~~~~~~~~~~~~~~A~~~~~fL~~f~~~fp~~~~~~~yI~GESYgG---------~~inLk 195 (454)
+=..|+.+|..-+.||+..-....... .-....+|+.++++...+.. .....++.|+|.|||| ..-.++
T Consensus 13 ~Gy~v~~~~~rGs~g~g~~~~~~~~~~-~~~~~~~D~~~~i~~l~~~~-~iD~~ri~i~G~S~GG~~a~~~~~~~~~~f~ 90 (213)
T PF00326_consen 13 QGYAVLVPNYRGSGGYGKDFHEAGRGD-WGQADVDDVVAAIEYLIKQY-YIDPDRIGIMGHSYGGYLALLAATQHPDRFK 90 (213)
T ss_dssp TT-EEEEEE-TTSSSSHHHHHHTTTTG-TTHHHHHHHHHHHHHHHHTT-SEEEEEEEEEEETHHHHHHHHHHHHTCCGSS
T ss_pred CCEEEEEEcCCCCCccchhHHHhhhcc-ccccchhhHHHHHHHHhccc-cccceeEEEEcccccccccchhhcccceeee
Confidence 346789999877777765321211111 23456778888777655544 5566789999999999 344579
Q ss_pred eeeeecccccCCCcc
Q 012876 196 GFMIGNAVINDPTDT 210 (454)
Q Consensus 196 Gi~iGng~~~p~~~~ 210 (454)
.++.++|.+|+....
T Consensus 91 a~v~~~g~~d~~~~~ 105 (213)
T PF00326_consen 91 AAVAGAGVSDLFSYY 105 (213)
T ss_dssp EEEEESE-SSTTCSB
T ss_pred eeeccceecchhccc
Confidence 999999998877643
No 58
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=97.29 E-value=0.00048 Score=68.59 Aligned_cols=116 Identities=18% Similarity=0.230 Sum_probs=72.0
Q ss_pred eeEEEEEEe--cCCCCCCCeEEEeCCCCCchhhchhhhhhcCCeEEcCCCCcccccCCCcccccceEEEeCCCccCCCCc
Q 012876 66 ALFYWFFEA--QKGVSSKPLVLWLNGGPGCSSIAYGAAQELGPFLVGGNGSRLKFNKYSWNKAANMLFLEAPVGVGFSYT 143 (454)
Q Consensus 66 ~lfy~f~es--~~~~~~~PlilWlnGGPG~SS~~~g~f~E~GP~~~~~~~~~l~~N~~sW~~~anvlyIDqPvGtGfSy~ 143 (454)
.-.||++++ +.+|++||+||++.|| |.+.+.=|+.+.. ..+-|...+...++.+|= |-+
T Consensus 105 ~~s~Wlvk~P~~~~pk~DpVlIYlHGG--------GY~l~~~p~qi~~-----L~~i~~~l~~~SILvLDY------sLt 165 (374)
T PF10340_consen 105 SQSYWLVKAPNRFKPKSDPVLIYLHGG--------GYFLGTTPSQIEF-----LLNIYKLLPEVSILVLDY------SLT 165 (374)
T ss_pred cceEEEEeCCcccCCCCCcEEEEEcCC--------eeEecCCHHHHHH-----HHHHHHHcCCCeEEEEec------ccc
Confidence 347999985 3468899999999999 5566555654321 111111122338999993 332
Q ss_pred C---CCCCCcccChHHhHHHHHHHHHHHHHHCCCCCCCCeEEEcccccc--------------cccCcceeeeecccccC
Q 012876 144 N---NSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAD--------------SFINLKGFMIGNAVIND 206 (454)
Q Consensus 144 ~---~~~~~~~~~~~~~A~~~~~fL~~f~~~fp~~~~~~~yI~GESYgG--------------~~inLkGi~iGng~~~p 206 (454)
. .+..|++ +..++.+..+...+.. ..+++.|.|+|-|| ..+--|++++.+||+++
T Consensus 166 ~~~~~~~~yPt-----QL~qlv~~Y~~Lv~~~---G~~nI~LmGDSAGGnL~Ls~LqyL~~~~~~~~Pk~~iLISPWv~l 237 (374)
T PF10340_consen 166 SSDEHGHKYPT-----QLRQLVATYDYLVESE---GNKNIILMGDSAGGNLALSFLQYLKKPNKLPYPKSAILISPWVNL 237 (374)
T ss_pred ccccCCCcCch-----HHHHHHHHHHHHHhcc---CCCeEEEEecCccHHHHHHHHHHHhhcCCCCCCceeEEECCCcCC
Confidence 2 2333442 3444444444444322 34689999999999 22445899999999999
Q ss_pred CC
Q 012876 207 PT 208 (454)
Q Consensus 207 ~~ 208 (454)
..
T Consensus 238 ~~ 239 (374)
T PF10340_consen 238 VP 239 (374)
T ss_pred cC
Confidence 73
No 59
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=96.79 E-value=0.0074 Score=58.07 Aligned_cols=122 Identities=11% Similarity=0.060 Sum_probs=71.3
Q ss_pred CceeEEEEEEecCCCCCCCeEEEeCCCCCchhhchhhhhhcCCeEEcCCCCcccccCCCcccccceEEEeCCCccCCCCc
Q 012876 64 HKALFYWFFEAQKGVSSKPLVLWLNGGPGCSSIAYGAAQELGPFLVGGNGSRLKFNKYSWNKAANMLFLEAPVGVGFSYT 143 (454)
Q Consensus 64 ~~~lfy~f~es~~~~~~~PlilWlnGGPG~SS~~~g~f~E~GP~~~~~~~~~l~~N~~sW~~~anvlyIDqPvGtGfSy~ 143 (454)
..++|.|+++.... ..+|+||.++|-.+-..-..-.+..... .|. ..-.+++-+|.| |.|.|..
T Consensus 9 ~g~~~~~~~~p~~~-~~~~~VlllHG~g~~~~~~~~~~~~la~--------~La------~~Gy~Vl~~Dl~-G~G~S~g 72 (266)
T TIGR03101 9 HGFRFCLYHPPVAV-GPRGVVIYLPPFAEEMNKSRRMVALQAR--------AFA------AGGFGVLQIDLY-GCGDSAG 72 (266)
T ss_pred CCcEEEEEecCCCC-CCceEEEEECCCcccccchhHHHHHHHH--------HHH------HCCCEEEEECCC-CCCCCCC
Confidence 45689998876432 3378999999753311000001111000 011 123689999976 9998864
Q ss_pred CCCCCCcccChHHhHHHHHHHHHHHHHHCCCCCCCCeEEEcccccc---------cccCcceeeeecccccCCCc
Q 012876 144 NNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAD---------SFINLKGFMIGNAVINDPTD 209 (454)
Q Consensus 144 ~~~~~~~~~~~~~~A~~~~~fL~~f~~~fp~~~~~~~yI~GESYgG---------~~inLkGi~iGng~~~p~~~ 209 (454)
.... . +.+...+|+..+++ |++.. ...+++|.|+|.|| .+-.++++++.+|.++....
T Consensus 73 ~~~~-~---~~~~~~~Dv~~ai~-~L~~~---~~~~v~LvG~SmGG~vAl~~A~~~p~~v~~lVL~~P~~~g~~~ 139 (266)
T TIGR03101 73 DFAA-A---RWDVWKEDVAAAYR-WLIEQ---GHPPVTLWGLRLGALLALDAANPLAAKCNRLVLWQPVVSGKQQ 139 (266)
T ss_pred cccc-C---CHHHHHHHHHHHHH-HHHhc---CCCCEEEEEECHHHHHHHHHHHhCccccceEEEeccccchHHH
Confidence 3221 1 33345566555433 44432 23589999999999 34568899999998775543
No 60
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=96.64 E-value=0.007 Score=56.05 Aligned_cols=107 Identities=12% Similarity=0.021 Sum_probs=55.8
Q ss_pred CCCCCeEEEeCCCCCchhhchhhhhhcCCeEEcCCCCcccccCCCcccccceEEEeCCCccCCCCc-----CCCCCCccc
Q 012876 78 VSSKPLVLWLNGGPGCSSIAYGAAQELGPFLVGGNGSRLKFNKYSWNKAANMLFLEAPVGVGFSYT-----NNSEDLHKL 152 (454)
Q Consensus 78 ~~~~PlilWlnGGPG~SS~~~g~f~E~GP~~~~~~~~~l~~N~~sW~~~anvlyIDqPvGtGfSy~-----~~~~~~~~~ 152 (454)
.+..|+||+|.|+++.++. +..-.+.. .+-. ..-..||..|.| |.|.+.. ......
T Consensus 10 ~~~~P~vv~lHG~~~~~~~-~~~~~~~~---------~~a~-----~~g~~Vv~Pd~~-g~~~~~~~~~~~~~~~~~--- 70 (212)
T TIGR01840 10 TGPRALVLALHGCGQTASA-YVIDWGWK---------AAAD-----RYGFVLVAPEQT-SYNSSNNCWDWFFTHHRA--- 70 (212)
T ss_pred CCCCCEEEEeCCCCCCHHH-HhhhcChH---------HHHH-----hCCeEEEecCCc-CccccCCCCCCCCccccC---
Confidence 4578999999999987665 32100000 0000 012467777765 4332211 000000
Q ss_pred ChHHhHHHHHHHHHHHHHHCCCCCCCCeEEEcccccc---------cccCcceeeeecccc
Q 012876 153 GDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAD---------SFINLKGFMIGNAVI 204 (454)
Q Consensus 153 ~~~~~A~~~~~fL~~f~~~fp~~~~~~~yI~GESYgG---------~~inLkGi~iGng~~ 204 (454)
.......++.+++....+.+ .....+++|+|+|.|| .+-.+.++++..|..
T Consensus 71 ~~~~~~~~~~~~i~~~~~~~-~id~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~~~~~g~~ 130 (212)
T TIGR01840 71 RGTGEVESLHQLIDAVKANY-SIDPNRVYVTGLSAGGGMTAVLGCTYPDVFAGGASNAGLP 130 (212)
T ss_pred CCCccHHHHHHHHHHHHHhc-CcChhheEEEEECHHHHHHHHHHHhCchhheEEEeecCCc
Confidence 01112344444444444444 3445689999999999 233467777776653
No 61
>PRK10115 protease 2; Provisional
Probab=96.47 E-value=0.098 Score=57.34 Aligned_cols=131 Identities=15% Similarity=0.066 Sum_probs=74.3
Q ss_pred EEecCCCCceeEEEEEEecC--CCCCCCeEEEeCCCCCchhhchhhhhhcCCeEEcCCCCcccccCCCcccccceEEEeC
Q 012876 57 VKLRPNDHKALFYWFFEAQK--GVSSKPLVLWLNGGPGCSSIAYGAAQELGPFLVGGNGSRLKFNKYSWNKAANMLFLEA 134 (454)
Q Consensus 57 l~v~~~~~~~lfy~f~es~~--~~~~~PlilWlnGGPG~SS~~~g~f~E~GP~~~~~~~~~l~~N~~sW~~~anvlyIDq 134 (454)
+.+....|..+-.|++-... .....|+||+..||||.+..- ++..+. .+|....=++.+=.
T Consensus 419 v~~~s~DG~~Ip~~l~~~~~~~~~~~~P~ll~~hGg~~~~~~p-~f~~~~----------------~~l~~rG~~v~~~n 481 (686)
T PRK10115 419 LWITARDGVEVPVSLVYHRKHFRKGHNPLLVYGYGSYGASIDA-DFSFSR----------------LSLLDRGFVYAIVH 481 (686)
T ss_pred EEEECCCCCEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCC-CccHHH----------------HHHHHCCcEEEEEE
Confidence 33433346677776554332 234569999999999998652 222221 23444433344444
Q ss_pred CCccC-CCCc--CCCCCCcccChHHhHHHHHHHHHHHHHHCCCCCCCCeEEEcccccc---------cccCcceeeeecc
Q 012876 135 PVGVG-FSYT--NNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAD---------SFINLKGFMIGNA 202 (454)
Q Consensus 135 PvGtG-fSy~--~~~~~~~~~~~~~~A~~~~~fL~~f~~~fp~~~~~~~yI~GESYgG---------~~inLkGi~iGng 202 (454)
+-|-| |... .... .. .-...-+|+..+.+-.. ...--...++.|.|-|||| .+--+++++.++|
T Consensus 482 ~RGs~g~G~~w~~~g~-~~--~k~~~~~D~~a~~~~Lv-~~g~~d~~rl~i~G~S~GG~l~~~~~~~~Pdlf~A~v~~vp 557 (686)
T PRK10115 482 VRGGGELGQQWYEDGK-FL--KKKNTFNDYLDACDALL-KLGYGSPSLCYGMGGSAGGMLMGVAINQRPELFHGVIAQVP 557 (686)
T ss_pred cCCCCccCHHHHHhhh-hh--cCCCcHHHHHHHHHHHH-HcCCCChHHeEEEEECHHHHHHHHHHhcChhheeEEEecCC
Confidence 55543 3321 1111 00 11134666666665433 3333345679999999999 2345889999999
Q ss_pred cccCCC
Q 012876 203 VINDPT 208 (454)
Q Consensus 203 ~~~p~~ 208 (454)
++|...
T Consensus 558 ~~D~~~ 563 (686)
T PRK10115 558 FVDVVT 563 (686)
T ss_pred chhHhh
Confidence 887764
No 62
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=96.42 E-value=0.033 Score=53.53 Aligned_cols=120 Identities=18% Similarity=0.138 Sum_probs=79.9
Q ss_pred CceeEEEEEEecCCCCCCCeEEEeCCCCCchhhchhhhhhcCCeEEcCCCCcccccCCCcccccceEEEeCCCccCCCCc
Q 012876 64 HKALFYWFFEAQKGVSSKPLVLWLNGGPGCSSIAYGAAQELGPFLVGGNGSRLKFNKYSWNKAANMLFLEAPVGVGFSYT 143 (454)
Q Consensus 64 ~~~lfy~f~es~~~~~~~PlilWlnGGPG~SS~~~g~f~E~GP~~~~~~~~~l~~N~~sW~~~anvlyIDqPvGtGfSy~ 143 (454)
+..||.-.+..+..++.+-+|+...|.=+-||..| .+.-. .|..+- .-+..+|+. |.|.|-+
T Consensus 37 G~~lft~~W~p~~~~~pr~lv~~~HG~g~~~s~~~---~~~a~--------~l~~~g------~~v~a~D~~-GhG~SdG 98 (313)
T KOG1455|consen 37 GAKLFTQSWLPLSGTEPRGLVFLCHGYGEHSSWRY---QSTAK--------RLAKSG------FAVYAIDYE-GHGRSDG 98 (313)
T ss_pred CCEeEEEecccCCCCCCceEEEEEcCCcccchhhH---HHHHH--------HHHhCC------CeEEEeecc-CCCcCCC
Confidence 66888888776666678889999988655553212 11110 111111 235668975 9999975
Q ss_pred CCCCCCcccChHHhHHHHHHHHHHHHHHCCCCCCCCeEEEcccccc---------cccCcceeeeeccccc
Q 012876 144 NNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAD---------SFINLKGFMIGNAVIN 205 (454)
Q Consensus 144 ~~~~~~~~~~~~~~A~~~~~fL~~f~~~fp~~~~~~~yI~GESYgG---------~~inLkGi~iGng~~~ 205 (454)
.. .|.. +-+.+.+|...|+..+-. ..+++..|.|++|||.|| .+--..|+++..|++-
T Consensus 99 l~--~yi~-~~d~~v~D~~~~~~~i~~-~~e~~~lp~FL~GeSMGGAV~Ll~~~k~p~~w~G~ilvaPmc~ 165 (313)
T KOG1455|consen 99 LH--AYVP-SFDLVVDDVISFFDSIKE-REENKGLPRFLFGESMGGAVALLIALKDPNFWDGAILVAPMCK 165 (313)
T ss_pred Cc--ccCC-cHHHHHHHHHHHHHHHhh-ccccCCCCeeeeecCcchHHHHHHHhhCCcccccceeeecccc
Confidence 43 3444 778889998877776544 558889999999999999 2334577777777753
No 63
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=96.37 E-value=0.016 Score=47.29 Aligned_cols=65 Identities=32% Similarity=0.382 Sum_probs=56.3
Q ss_pred CCeEEEEecCCCcccCchHHHHHHHHcCCCCccceeeceeCCeEeEEEEEeecCeEEEEEcCCccccccCChHHHHHHHH
Q 012876 362 GLRIWVYSGDTDGRVPVTSTRYSINKMGLKIKEEWRAWFHKHQVAGWVETYEKGLTLVTVRGAGHQVPAFAPAQSLSLFT 441 (454)
Q Consensus 362 ~~rVliy~Gd~D~i~~~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~Gy~~~~~~~Ltf~~V~gAGHmvP~dqP~~a~~~i~ 441 (454)
..+||+.++..|.++|+.+.+...+.|. +-..+++.++||-+-...-..+.+++.
T Consensus 34 ~~piL~l~~~~Dp~TP~~~a~~~~~~l~-------------------------~s~lvt~~g~gHg~~~~~s~C~~~~v~ 88 (103)
T PF08386_consen 34 APPILVLGGTHDPVTPYEGARAMAARLP-------------------------GSRLVTVDGAGHGVYAGGSPCVDKAVD 88 (103)
T ss_pred CCCEEEEecCcCCCCcHHHHHHHHHHCC-------------------------CceEEEEeccCcceecCCChHHHHHHH
Confidence 4899999999999999999999999866 667799999999997644457789999
Q ss_pred HHHcCCCCCC
Q 012876 442 KFLSAATLPS 451 (454)
Q Consensus 442 ~fl~~~~~~~ 451 (454)
+|+..-.+|.
T Consensus 89 ~yl~~G~lP~ 98 (103)
T PF08386_consen 89 DYLLDGTLPA 98 (103)
T ss_pred HHHHcCCCCC
Confidence 9998877775
No 64
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=96.37 E-value=0.01 Score=56.21 Aligned_cols=99 Identities=24% Similarity=0.421 Sum_probs=70.7
Q ss_pred CCCCCeEEEeCCCCCchhhchhhhhhcCCeEEcCCCCcccccCCCcccccceEEEeCCCccCCCCcCCCCCCcccChHHh
Q 012876 78 VSSKPLVLWLNGGPGCSSIAYGAAQELGPFLVGGNGSRLKFNKYSWNKAANMLFLEAPVGVGFSYTNNSEDLHKLGDQVT 157 (454)
Q Consensus 78 ~~~~PlilWlnGGPG~SS~~~g~f~E~GP~~~~~~~~~l~~N~~sW~~~anvlyIDqPvGtGfSy~~~~~~~~~~~~~~~ 157 (454)
...-|+++.+.|| |.|.|.++.|.- .+..+- ..-++-+| -.|.|=+..++..+. +.+..
T Consensus 71 ~t~gpil~l~HG~-G~S~LSfA~~a~-----------el~s~~-----~~r~~a~D-lRgHGeTk~~~e~dl---S~eT~ 129 (343)
T KOG2564|consen 71 ATEGPILLLLHGG-GSSALSFAIFAS-----------ELKSKI-----RCRCLALD-LRGHGETKVENEDDL---SLETM 129 (343)
T ss_pred CCCccEEEEeecC-cccchhHHHHHH-----------HHHhhc-----ceeEEEee-ccccCccccCChhhc---CHHHH
Confidence 4567999999987 888887666541 111111 12237799 689999988877764 78889
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCeEEEcccccc----------cccCcceeeeec
Q 012876 158 ANDSYAFLIGWFKRFPNFKSHDFYIAGESYAD----------SFINLKGFMIGN 201 (454)
Q Consensus 158 A~~~~~fL~~f~~~fp~~~~~~~yI~GESYgG----------~~inLkGi~iGn 201 (454)
++|+...++.+|..-| .+++|.|||.|| .-.+|.|+.+.+
T Consensus 130 ~KD~~~~i~~~fge~~----~~iilVGHSmGGaIav~~a~~k~lpsl~Gl~viD 179 (343)
T KOG2564|consen 130 SKDFGAVIKELFGELP----PQIILVGHSMGGAIAVHTAASKTLPSLAGLVVID 179 (343)
T ss_pred HHHHHHHHHHHhccCC----CceEEEeccccchhhhhhhhhhhchhhhceEEEE
Confidence 9999999999885433 269999999999 233577777654
No 65
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=96.34 E-value=0.041 Score=53.13 Aligned_cols=32 Identities=13% Similarity=0.083 Sum_probs=25.3
Q ss_pred CCCCCeEEEcccccc---------cccCcceeeeecccccC
Q 012876 175 FKSHDFYIAGESYAD---------SFINLKGFMIGNAVIND 206 (454)
Q Consensus 175 ~~~~~~yI~GESYgG---------~~inLkGi~iGng~~~p 206 (454)
....+++|+|+|+|| .+-.+++++..+|+.++
T Consensus 135 ~~~~~~~~~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~~~~ 175 (275)
T TIGR02821 135 LDGERQGITGHSMGGHGALVIALKNPDRFKSVSAFAPIVAP 175 (275)
T ss_pred CCCCceEEEEEChhHHHHHHHHHhCcccceEEEEECCccCc
Confidence 445689999999999 34457899998998775
No 66
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=96.00 E-value=0.044 Score=50.22 Aligned_cols=96 Identities=19% Similarity=0.223 Sum_probs=61.0
Q ss_pred CCeEEEeCCCCCchhhchhhhhhcCCeEEcCCCCcccccCCCcccccceEEEeCCCccCCCCcCCCCCCcccChHHhHHH
Q 012876 81 KPLVLWLNGGPGCSSIAYGAAQELGPFLVGGNGSRLKFNKYSWNKAANMLFLEAPVGVGFSYTNNSEDLHKLGDQVTAND 160 (454)
Q Consensus 81 ~PlilWlnGGPG~SS~~~g~f~E~GP~~~~~~~~~l~~N~~sW~~~anvlyIDqPvGtGfSy~~~~~~~~~~~~~~~A~~ 160 (454)
.|.++++.|+|+++.. +.-..+. +..... + .+++.+|+| |.|.|. .. .+ .....+.+
T Consensus 21 ~~~i~~~hg~~~~~~~-~~~~~~~-----------~~~~~~---~-~~~~~~d~~-g~g~s~-~~--~~---~~~~~~~~ 77 (282)
T COG0596 21 GPPLVLLHGFPGSSSV-WRPVFKV-----------LPALAA---R-YRVIAPDLR-GHGRSD-PA--GY---SLSAYADD 77 (282)
T ss_pred CCeEEEeCCCCCchhh-hHHHHHH-----------hhcccc---c-eEEEEeccc-CCCCCC-cc--cc---cHHHHHHH
Confidence 6699999999999888 4441111 111111 1 799999999 999997 11 11 22222455
Q ss_pred HHHHHHHHHHHCCCCCCCCeEEEcccccc---------cccCcceeeeecccccC
Q 012876 161 SYAFLIGWFKRFPNFKSHDFYIAGESYAD---------SFINLKGFMIGNAVIND 206 (454)
Q Consensus 161 ~~~fL~~f~~~fp~~~~~~~yI~GESYgG---------~~inLkGi~iGng~~~p 206 (454)
+..++ +.. ...++++.|+|+|| .+-.++++++.++...+
T Consensus 78 ~~~~~----~~~---~~~~~~l~G~S~Gg~~~~~~~~~~p~~~~~~v~~~~~~~~ 125 (282)
T COG0596 78 LAALL----DAL---GLEKVVLVGHSMGGAVALALALRHPDRVRGLVLIGPAPPP 125 (282)
T ss_pred HHHHH----HHh---CCCceEEEEecccHHHHHHHHHhcchhhheeeEecCCCCc
Confidence 44444 322 22238999999999 34468999888877663
No 67
>PLN02442 S-formylglutathione hydrolase
Probab=95.96 E-value=0.027 Score=54.76 Aligned_cols=47 Identities=15% Similarity=0.024 Sum_probs=34.6
Q ss_pred CCeEEEEecCCCcccCch-HHHHHHHHcCCCCccceeeceeCCeEeEEEEEeecCeEEEEEcCCccccc
Q 012876 362 GLRIWVYSGDTDGRVPVT-STRYSINKMGLKIKEEWRAWFHKHQVAGWVETYEKGLTLVTVRGAGHQVP 429 (454)
Q Consensus 362 ~~rVliy~Gd~D~i~~~~-Gt~~~i~~L~w~~~~~~~~w~~~~~~~Gy~~~~~~~Ltf~~V~gAGHmvP 429 (454)
+.+|+|.+|+.|.+|+.. .++.+.+.++= .+.+.++..+.|++|-..
T Consensus 217 ~~pvli~~G~~D~~v~~~~~s~~~~~~l~~---------------------~g~~~~~~~~pg~~H~~~ 264 (283)
T PLN02442 217 SATILIDQGEADKFLKEQLLPENFEEACKE---------------------AGAPVTLRLQPGYDHSYF 264 (283)
T ss_pred CCCEEEEECCCCccccccccHHHHHHHHHH---------------------cCCCeEEEEeCCCCccHH
Confidence 689999999999999974 46666555431 111578888999999765
No 68
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=95.88 E-value=0.32 Score=47.49 Aligned_cols=69 Identities=23% Similarity=0.310 Sum_probs=52.6
Q ss_pred CCeEEEEecCCCcccCchHHHHHHHHcCCCCccceeeceeCCeEeEEEEEeecCeEEEEEcCCccccc--cCChHHHHHH
Q 012876 362 GLRIWVYSGDTDGRVPVTSTRYSINKMGLKIKEEWRAWFHKHQVAGWVETYEKGLTLVTVRGAGHQVP--AFAPAQSLSL 439 (454)
Q Consensus 362 ~~rVliy~Gd~D~i~~~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~Gy~~~~~~~Ltf~~V~gAGHmvP--~dqP~~a~~~ 439 (454)
+.+|+||+|..|-++|+..++..++++-=.|. .+++|.++.+++|+.. ...| .++.-
T Consensus 219 ~~Pv~i~~g~~D~vvP~~~~~~l~~~~c~~G~--------------------a~V~~~~~~~~~H~~~~~~~~~-~a~~W 277 (290)
T PF03583_consen 219 TVPVLIYQGTADEVVPPADTDALVAKWCAAGG--------------------ADVEYVRYPGGGHLGAAFASAP-DALAW 277 (290)
T ss_pred CCCEEEEecCCCCCCChHHHHHHHHHHHHcCC--------------------CCEEEEecCCCChhhhhhcCcH-HHHHH
Confidence 68999999999999999999999988542221 1688999999999964 4555 45566
Q ss_pred HHHHHcCCCCCC
Q 012876 440 FTKFLSAATLPS 451 (454)
Q Consensus 440 i~~fl~~~~~~~ 451 (454)
|++=+.|++.++
T Consensus 278 l~~rf~G~~~~~ 289 (290)
T PF03583_consen 278 LDDRFAGKPATS 289 (290)
T ss_pred HHHHHCCCCCCC
Confidence 666667776654
No 69
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=95.85 E-value=0.012 Score=59.00 Aligned_cols=63 Identities=21% Similarity=0.162 Sum_probs=49.8
Q ss_pred CCeEEEEecCCCcccCchHHHHHHHHcCCCCccceeeceeCCeEeEEEEEeecCeEEEEEc-CCccccccCChHHHHHHH
Q 012876 362 GLRIWVYSGDTDGRVPVTSTRYSINKMGLKIKEEWRAWFHKHQVAGWVETYEKGLTLVTVR-GAGHQVPAFAPAQSLSLF 440 (454)
Q Consensus 362 ~~rVliy~Gd~D~i~~~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~Gy~~~~~~~Ltf~~V~-gAGHmvP~dqP~~a~~~i 440 (454)
..++|+..|+.|.++|....+...+.+. .. .-..+|+.|. ++||+++.++|+...+.|
T Consensus 288 ~~P~Lvi~G~~D~~~p~~~~~~~a~~i~--~~-------------------~~~v~~~~i~~~~GH~~~le~p~~~~~~l 346 (351)
T TIGR01392 288 KAPFLVVSITSDWLFPPAESRELAKALP--AA-------------------GLRVTYVEIESPYGHDAFLVETDQVEELI 346 (351)
T ss_pred CCCEEEEEeCCccccCHHHHHHHHHHHh--hc-------------------CCceEEEEeCCCCCcchhhcCHHHHHHHH
Confidence 7899999999999999998887766653 00 0013455564 899999999999999999
Q ss_pred HHHHc
Q 012876 441 TKFLS 445 (454)
Q Consensus 441 ~~fl~ 445 (454)
.+|+.
T Consensus 347 ~~FL~ 351 (351)
T TIGR01392 347 RGFLR 351 (351)
T ss_pred HHHhC
Confidence 99973
No 70
>PRK10566 esterase; Provisional
Probab=95.78 E-value=0.066 Score=50.46 Aligned_cols=62 Identities=18% Similarity=0.268 Sum_probs=47.1
Q ss_pred CCeEEEEecCCCcccCchHHHHHHHHcCCCCccceeeceeCCeEeEEEEEeecCeEEEEEcCCccccccCChHHHHHHHH
Q 012876 362 GLRIWVYSGDTDGRVPVTSTRYSINKMGLKIKEEWRAWFHKHQVAGWVETYEKGLTLVTVRGAGHQVPAFAPAQSLSLFT 441 (454)
Q Consensus 362 ~~rVliy~Gd~D~i~~~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~Gy~~~~~~~Ltf~~V~gAGHmvP~dqP~~a~~~i~ 441 (454)
..++|+.+|..|.+++...++.+.+.++=.+.. . +++++++.|+||... | ..++.+.
T Consensus 186 ~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~------------------~-~~~~~~~~~~~H~~~---~-~~~~~~~ 242 (249)
T PRK10566 186 DRPLLLWHGLADDVVPAAESLRLQQALRERGLD------------------K-NLTCLWEPGVRHRIT---P-EALDAGV 242 (249)
T ss_pred CCCEEEEEcCCCCcCCHHHHHHHHHHHHhcCCC------------------c-ceEEEecCCCCCccC---H-HHHHHHH
Confidence 479999999999999999999888777522221 1 588899999999974 3 4566666
Q ss_pred HHHcC
Q 012876 442 KFLSA 446 (454)
Q Consensus 442 ~fl~~ 446 (454)
+|+.+
T Consensus 243 ~fl~~ 247 (249)
T PRK10566 243 AFFRQ 247 (249)
T ss_pred HHHHh
Confidence 77753
No 71
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=95.67 E-value=0.033 Score=56.74 Aligned_cols=65 Identities=12% Similarity=0.074 Sum_probs=53.3
Q ss_pred CCeEEEEecCCCcccCchHHHHHHHHcCCCCccceeeceeCCeEeEEEEEeecCeEEEEEcC-CccccccCChHHHHHHH
Q 012876 362 GLRIWVYSGDTDGRVPVTSTRYSINKMGLKIKEEWRAWFHKHQVAGWVETYEKGLTLVTVRG-AGHQVPAFAPAQSLSLF 440 (454)
Q Consensus 362 ~~rVliy~Gd~D~i~~~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~Gy~~~~~~~Ltf~~V~g-AGHmvP~dqP~~a~~~i 440 (454)
..||||..|+.|.++|....+...+.+.= .+.+.++..|.+ +||+.+.++|+...+.|
T Consensus 323 ~~PtLvI~G~~D~l~p~~~~~~la~~lp~---------------------~~~~a~l~~I~s~~GH~~~le~p~~~~~~I 381 (389)
T PRK06765 323 EANVLMIPCKQDLLQPPRYNYKMVDILQK---------------------QGKYAEVYEIESINGHMAGVFDIHLFEKKI 381 (389)
T ss_pred CCCEEEEEeCCCCCCCHHHHHHHHHHhhh---------------------cCCCeEEEEECCCCCcchhhcCHHHHHHHH
Confidence 79999999999999998877766655430 001578888986 99999999999999999
Q ss_pred HHHHcCC
Q 012876 441 TKFLSAA 447 (454)
Q Consensus 441 ~~fl~~~ 447 (454)
.+|+..+
T Consensus 382 ~~FL~~~ 388 (389)
T PRK06765 382 YEFLNRK 388 (389)
T ss_pred HHHHccc
Confidence 9999764
No 72
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=95.58 E-value=0.58 Score=49.55 Aligned_cols=49 Identities=16% Similarity=0.289 Sum_probs=39.6
Q ss_pred CCeEEEEecCCCcccCchHHHHHHHHcCCCCccceeeceeCCeEeEEEEEeecCeEEEEEcCCccccccCChHH
Q 012876 362 GLRIWVYSGDTDGRVPVTSTRYSINKMGLKIKEEWRAWFHKHQVAGWVETYEKGLTLVTVRGAGHQVPAFAPAQ 435 (454)
Q Consensus 362 ~~rVliy~Gd~D~i~~~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~Gy~~~~~~~Ltf~~V~gAGHmvP~dqP~~ 435 (454)
.+++++..|..|.++|+..++...+.+. +-...++.++||+++..+|..
T Consensus 415 ~vPvLvV~G~~D~IvP~~sa~~l~~~i~-------------------------~~~~~vL~~sGHi~~ienPp~ 463 (532)
T TIGR01838 415 KVPVYIIATREDHIAPWQSAYRGAALLG-------------------------GPKTFVLGESGHIAGVVNPPS 463 (532)
T ss_pred CCCEEEEeeCCCCcCCHHHHHHHHHHCC-------------------------CCEEEEECCCCCchHhhCCCC
Confidence 6999999999999999998887776644 333456889999998887743
No 73
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=95.25 E-value=0.2 Score=48.19 Aligned_cols=116 Identities=14% Similarity=0.164 Sum_probs=70.2
Q ss_pred CceeEEEEEEecCCCCCCCeEEEeCCCCCchhhchhhhhhcCCeEEcCCCCcccccCCCcccccc-----eEEEeC----
Q 012876 64 HKALFYWFFEAQKGVSSKPLVLWLNGGPGCSSIAYGAAQELGPFLVGGNGSRLKFNKYSWNKAAN-----MLFLEA---- 134 (454)
Q Consensus 64 ~~~lfy~f~es~~~~~~~PlilWlnGGPG~SS~~~g~f~E~GP~~~~~~~~~l~~N~~sW~~~an-----vlyIDq---- 134 (454)
+...-||+|.-..-++.+||+|.|.|+=|..+- +- +-..|++.|. |+|-|+
T Consensus 44 g~~r~y~l~vP~g~~~~apLvv~LHG~~~sgag-~~-------------------~~sg~d~lAd~~gFlV~yPdg~~~~ 103 (312)
T COG3509 44 GLKRSYRLYVPPGLPSGAPLVVVLHGSGGSGAG-QL-------------------HGTGWDALADREGFLVAYPDGYDRA 103 (312)
T ss_pred CCccceEEEcCCCCCCCCCEEEEEecCCCChHH-hh-------------------cccchhhhhcccCcEEECcCccccc
Confidence 566789988877778888999999998777544 11 1123333332 233321
Q ss_pred --CCccCCCCcCCCCCCcccChHHhHHHHHHHHHHHHHHCCCCCCCCeEEEcccccc---------cccCcceeeeeccc
Q 012876 135 --PVGVGFSYTNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAD---------SFINLKGFMIGNAV 203 (454)
Q Consensus 135 --PvGtGfSy~~~~~~~~~~~~~~~A~~~~~fL~~f~~~fp~~~~~~~yI~GESYgG---------~~inLkGi~iGng~ 203 (454)
|-+.|=++...+.. .....+..+.+.+.....+| ......+||+|=|-|| ..--+.++++..|.
T Consensus 104 wn~~~~~~~~~p~~~~----~g~ddVgflr~lva~l~~~~-gidp~RVyvtGlS~GG~Ma~~lac~~p~~faa~A~VAg~ 178 (312)
T COG3509 104 WNANGCGNWFGPADRR----RGVDDVGFLRALVAKLVNEY-GIDPARVYVTGLSNGGRMANRLACEYPDIFAAIAPVAGL 178 (312)
T ss_pred cCCCcccccCCccccc----CCccHHHHHHHHHHHHHHhc-CcCcceEEEEeeCcHHHHHHHHHhcCcccccceeeeecc
Confidence 34555554332211 12223444444444444555 4566689999999999 24457888888887
Q ss_pred c
Q 012876 204 I 204 (454)
Q Consensus 204 ~ 204 (454)
.
T Consensus 179 ~ 179 (312)
T COG3509 179 L 179 (312)
T ss_pred c
Confidence 7
No 74
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=95.18 E-value=0.022 Score=55.14 Aligned_cols=103 Identities=13% Similarity=0.052 Sum_probs=62.2
Q ss_pred CCCCCeEEEeCCCCCch-hhchhhhhhcCCeEEcCCCCcccccCCCcccccceEEEeCCCccCCCCcCCCCCCcc--cCh
Q 012876 78 VSSKPLVLWLNGGPGCS-SIAYGAAQELGPFLVGGNGSRLKFNKYSWNKAANMLFLEAPVGVGFSYTNNSEDLHK--LGD 154 (454)
Q Consensus 78 ~~~~PlilWlnGGPG~S-S~~~g~f~E~GP~~~~~~~~~l~~N~~sW~~~anvlyIDqPvGtGfSy~~~~~~~~~--~~~ 154 (454)
..+.|++|++.|-.|.. .. +- . ...+.+.-....|||.||-+.+ +... |.. .+.
T Consensus 33 ~~~~p~vilIHG~~~~~~~~-~~--~-------------~l~~~ll~~~~~nVi~vD~~~~---~~~~----y~~a~~~~ 89 (275)
T cd00707 33 NPSRPTRFIIHGWTSSGEES-WI--S-------------DLRKAYLSRGDYNVIVVDWGRG---ANPN----YPQAVNNT 89 (275)
T ss_pred CCCCCcEEEEcCCCCCCCCc-HH--H-------------HHHHHHHhcCCCEEEEEECccc---cccC----hHHHHHhH
Confidence 35678999999977755 22 10 0 0011111113589999997643 2111 110 134
Q ss_pred HHhHHHHHHHHHHHHHHCCCCCCCCeEEEcccccc---------cccCcceeeeecccc
Q 012876 155 QVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAD---------SFINLKGFMIGNAVI 204 (454)
Q Consensus 155 ~~~A~~~~~fL~~f~~~fp~~~~~~~yI~GESYgG---------~~inLkGi~iGng~~ 204 (454)
..+++++..+|+...+.. .+...+++|.|+|+|| .+-+++.|+..+|..
T Consensus 90 ~~v~~~la~~l~~L~~~~-g~~~~~i~lIGhSlGa~vAg~~a~~~~~~v~~iv~LDPa~ 147 (275)
T cd00707 90 RVVGAELAKFLDFLVDNT-GLSLENVHLIGHSLGAHVAGFAGKRLNGKLGRITGLDPAG 147 (275)
T ss_pred HHHHHHHHHHHHHHHHhc-CCChHHEEEEEecHHHHHHHHHHHHhcCccceeEEecCCc
Confidence 556777777777666543 2344589999999999 233688999988763
No 75
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=95.12 E-value=0.079 Score=56.58 Aligned_cols=120 Identities=16% Similarity=0.128 Sum_probs=72.9
Q ss_pred CceeEEEEEEecCCCCCCCeEEEeCCCCCchhhchhhhhhcCCeEEcCCCCcccccCCCcc-cccceEEEeCCCccCCCC
Q 012876 64 HKALFYWFFEAQKGVSSKPLVLWLNGGPGCSSIAYGAAQELGPFLVGGNGSRLKFNKYSWN-KAANMLFLEAPVGVGFSY 142 (454)
Q Consensus 64 ~~~lfy~f~es~~~~~~~PlilWlnGGPG~SS~~~g~f~E~GP~~~~~~~~~l~~N~~sW~-~~anvlyIDqPvGtGfSy 142 (454)
+..|+..++.... .+..|+||.++|--..+... . +.. . ....-|. +-..+|-+|. .|.|.|-
T Consensus 6 G~~L~~~~~~P~~-~~~~P~Il~~~gyg~~~~~~-~-----~~~--------~-~~~~~l~~~Gy~vv~~D~-RG~g~S~ 68 (550)
T TIGR00976 6 GTRLAIDVYRPAG-GGPVPVILSRTPYGKDAGLR-W-----GLD--------K-TEPAWFVAQGYAVVIQDT-RGRGASE 68 (550)
T ss_pred CCEEEEEEEecCC-CCCCCEEEEecCCCCchhhc-c-----ccc--------c-ccHHHHHhCCcEEEEEec-cccccCC
Confidence 5678877665332 34689999998653332210 0 000 0 0000121 2477899995 5999997
Q ss_pred cCCCCCCcccChHHhHHHHHHHHHHHHHHCCCCCCCCeEEEcccccc---------cccCcceeeeecccccCC
Q 012876 143 TNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAD---------SFINLKGFMIGNAVINDP 207 (454)
Q Consensus 143 ~~~~~~~~~~~~~~~A~~~~~fL~~f~~~fp~~~~~~~yI~GESYgG---------~~inLkGi~iGng~~~p~ 207 (454)
+.... + + ...++|+..+++ |+.+.| +.+.++.++|.|||| ..-.|++++..+++.+..
T Consensus 69 g~~~~-~---~-~~~~~D~~~~i~-~l~~q~-~~~~~v~~~G~S~GG~~a~~~a~~~~~~l~aiv~~~~~~d~~ 135 (550)
T TIGR00976 69 GEFDL-L---G-SDEAADGYDLVD-WIAKQP-WCDGNVGMLGVSYLAVTQLLAAVLQPPALRAIAPQEGVWDLY 135 (550)
T ss_pred CceEe-c---C-cccchHHHHHHH-HHHhCC-CCCCcEEEEEeChHHHHHHHHhccCCCceeEEeecCcccchh
Confidence 54221 1 2 345667666554 666665 344589999999999 245699999988886643
No 76
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=94.84 E-value=0.68 Score=42.54 Aligned_cols=164 Identities=17% Similarity=0.292 Sum_probs=94.4
Q ss_pred HHHHHHHHHHHHhhhccccccCCccccCcceecCCCCCCCCceeEEEeEEecCCCCceeEEEEEEecCCCCCCCeEEEeC
Q 012876 9 LCFMLCTLLVSAVASRSRVSHQTTEADADRVRDLPGQPKVEFKHYAGYVKLRPNDHKALFYWFFEAQKGVSSKPLVLWLN 88 (454)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~lpg~~~~~~~~~sGyl~v~~~~~~~lfy~f~es~~~~~~~PlilWln 88 (454)
+++.+..++.+-..++..+=|.-++.....| ..|-.-.+++. -|.+....+-.|.=|...+++ ++|.+|.|.
T Consensus 14 ~a~t~I~l~~lY~yQ~~LvYps~pqgsR~~v-ptP~~~n~pye----~i~l~T~D~vtL~a~~~~~E~---S~pTlLyfh 85 (300)
T KOG4391|consen 14 LAVTLIALGFLYKYQKTLVYPSFPQGSRENV-PTPKEFNMPYE----RIELRTRDKVTLDAYLMLSES---SRPTLLYFH 85 (300)
T ss_pred HHHHHHHHHHHHHHhceeeccCcccccccCC-CCccccCCCce----EEEEEcCcceeEeeeeecccC---CCceEEEEc
Confidence 3333344444445555555444433222222 22322123322 344443234456655555543 899999999
Q ss_pred CCCCchhhchhhhhhcCCeEEcCCCCcccccCCCcccccceEEEeCCCccCCCCcCCCCCCcccChHHhHHHHHHHHHHH
Q 012876 89 GGPGCSSIAYGAAQELGPFLVGGNGSRLKFNKYSWNKAANMLFLEAPVGVGFSYTNNSEDLHKLGDQVTANDSYAFLIGW 168 (454)
Q Consensus 89 GGPG~SS~~~g~f~E~GP~~~~~~~~~l~~N~~sW~~~anvlyIDqPvGtGfSy~~~~~~~~~~~~~~~A~~~~~fL~~f 168 (454)
|--|- .|.+.-+- + .... +-..||+-|+ =.|-|-|.+...+. ...-.|+. ..++
T Consensus 86 ~NAGN----mGhr~~i~------~--~fy~-----~l~mnv~ivs-YRGYG~S~GspsE~----GL~lDs~a----vldy 139 (300)
T KOG4391|consen 86 ANAGN----MGHRLPIA------R--VFYV-----NLKMNVLIVS-YRGYGKSEGSPSEE----GLKLDSEA----VLDY 139 (300)
T ss_pred cCCCc----ccchhhHH------H--HHHH-----HcCceEEEEE-eeccccCCCCcccc----ceeccHHH----HHHH
Confidence 76554 34444221 1 0111 2347888899 67999998875543 22222333 2334
Q ss_pred HHHCCCCCCCCeEEEcccccc---------cccCcceeeeecccccC
Q 012876 169 FKRFPNFKSHDFYIAGESYAD---------SFINLKGFMIGNAVIND 206 (454)
Q Consensus 169 ~~~fp~~~~~~~yI~GESYgG---------~~inLkGi~iGng~~~p 206 (454)
+-..|...+++++++|.|-|| ..-.+.++++-|-+++-
T Consensus 140 l~t~~~~dktkivlfGrSlGGAvai~lask~~~ri~~~ivENTF~SI 186 (300)
T KOG4391|consen 140 LMTRPDLDKTKIVLFGRSLGGAVAIHLASKNSDRISAIIVENTFLSI 186 (300)
T ss_pred HhcCccCCcceEEEEecccCCeeEEEeeccchhheeeeeeechhccc
Confidence 556889999999999999999 34578999999988765
No 77
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=94.38 E-value=0.31 Score=48.39 Aligned_cols=130 Identities=15% Similarity=0.192 Sum_probs=81.4
Q ss_pred EEeEEecCCCCceeEEEEEEecCCC--CCCCeEEEeCCCCCchhhchhhhhhcCCeEEcCCCCcccccCCCcc-cccceE
Q 012876 54 AGYVKLRPNDHKALFYWFFEAQKGV--SSKPLVLWLNGGPGCSSIAYGAAQELGPFLVGGNGSRLKFNKYSWN-KAANML 130 (454)
Q Consensus 54 sGyl~v~~~~~~~lfy~f~es~~~~--~~~PlilWlnGGPG~SS~~~g~f~E~GP~~~~~~~~~l~~N~~sW~-~~anvl 130 (454)
+.-+.++ ..+.++-+.|.....+ ..+|++||+.||=-|-+.. + .....+-.++. +.+|.+
T Consensus 63 ~~dv~~~--~~~~l~vRly~P~~~~~~~~~p~lvyfHGGGf~~~S~--------------~-~~~y~~~~~~~a~~~~~v 125 (336)
T KOG1515|consen 63 SKDVTID--PFTNLPVRLYRPTSSSSETKLPVLVYFHGGGFCLGSA--------------N-SPAYDSFCTRLAAELNCV 125 (336)
T ss_pred eeeeEec--CCCCeEEEEEcCCCCCcccCceEEEEEeCCccEeCCC--------------C-CchhHHHHHHHHHHcCeE
Confidence 3344443 3567999988876543 5899999999997665431 0 01222222333 455665
Q ss_pred EEeCCCccCCCCcCCCCCCcccChHHhHHHHHHHHHH-HHHHCCCCCCCCeEEEcccccc---------------cccCc
Q 012876 131 FLEAPVGVGFSYTNNSEDLHKLGDQVTANDSYAFLIG-WFKRFPNFKSHDFYIAGESYAD---------------SFINL 194 (454)
Q Consensus 131 yIDqPvGtGfSy~~~~~~~~~~~~~~~A~~~~~fL~~-f~~~fp~~~~~~~yI~GESYgG---------------~~inL 194 (454)
-| .++|--+.. ..++. .-++.-+.+..++.+ |.+..-..+ .++|+|.|-|| ..+.|
T Consensus 126 vv----SVdYRLAPE-h~~Pa-~y~D~~~Al~w~~~~~~~~~~~D~~--rv~l~GDSaGGNia~~va~r~~~~~~~~~ki 197 (336)
T KOG1515|consen 126 VV----SVDYRLAPE-HPFPA-AYDDGWAALKWVLKNSWLKLGADPS--RVFLAGDSAGGNIAHVVAQRAADEKLSKPKI 197 (336)
T ss_pred EE----ecCcccCCC-CCCCc-cchHHHHHHHHHHHhHHHHhCCCcc--cEEEEccCccHHHHHHHHHHHhhccCCCcce
Confidence 54 345655432 23443 444455555556665 887765554 39999999999 25889
Q ss_pred ceeeeecccccCCC
Q 012876 195 KGFMIGNAVINDPT 208 (454)
Q Consensus 195 kGi~iGng~~~p~~ 208 (454)
+|.++.-|++....
T Consensus 198 ~g~ili~P~~~~~~ 211 (336)
T KOG1515|consen 198 KGQILIYPFFQGTD 211 (336)
T ss_pred EEEEEEecccCCCC
Confidence 99999999886655
No 78
>PLN00021 chlorophyllase
Probab=94.34 E-value=0.13 Score=50.83 Aligned_cols=109 Identities=12% Similarity=0.091 Sum_probs=62.6
Q ss_pred EEEEEecCCCCCCCeEEEeCCCCCchhhchhhhhhcCCeEEcCCCCcccccCCCcccccceEEEeCCCccCCCCcCCCCC
Q 012876 69 YWFFEAQKGVSSKPLVLWLNGGPGCSSIAYGAAQELGPFLVGGNGSRLKFNKYSWNKAANMLFLEAPVGVGFSYTNNSED 148 (454)
Q Consensus 69 y~f~es~~~~~~~PlilWlnGGPG~SS~~~g~f~E~GP~~~~~~~~~l~~N~~sW~~~anvlyIDqPvGtGfSy~~~~~~ 148 (454)
.++.++ ...+.|+|+++.|+.+.+.. |..+.+. +. +| -..++.+|-+ | ++... .
T Consensus 42 ~v~~P~--~~g~~PvVv~lHG~~~~~~~-y~~l~~~-----------La----s~--G~~VvapD~~-g--~~~~~-~-- 95 (313)
T PLN00021 42 LVATPS--EAGTYPVLLFLHGYLLYNSF-YSQLLQH-----------IA----SH--GFIVVAPQLY-T--LAGPD-G-- 95 (313)
T ss_pred EEEeCC--CCCCCCEEEEECCCCCCccc-HHHHHHH-----------HH----hC--CCEEEEecCC-C--cCCCC-c--
Confidence 344443 24678999999999877665 4333221 11 11 1456667755 2 33211 1
Q ss_pred CcccChHHhHHHHHHHHHHHHHH-C---CCCCCCCeEEEcccccc----------c----ccCcceeeeecccccC
Q 012876 149 LHKLGDQVTANDSYAFLIGWFKR-F---PNFKSHDFYIAGESYAD----------S----FINLKGFMIGNAVIND 206 (454)
Q Consensus 149 ~~~~~~~~~A~~~~~fL~~f~~~-f---p~~~~~~~yI~GESYgG----------~----~inLkGi~iGng~~~p 206 (454)
. .+.+.+.++..++.+-++. - .+....+++|+|+|.|| . ...+++++..+|+...
T Consensus 96 -~--~~i~d~~~~~~~l~~~l~~~l~~~~~~d~~~v~l~GHS~GG~iA~~lA~~~~~~~~~~~v~ali~ldPv~g~ 168 (313)
T PLN00021 96 -T--DEIKDAAAVINWLSSGLAAVLPEGVRPDLSKLALAGHSRGGKTAFALALGKAAVSLPLKFSALIGLDPVDGT 168 (313)
T ss_pred -h--hhHHHHHHHHHHHHhhhhhhcccccccChhheEEEEECcchHHHHHHHhhccccccccceeeEEeecccccc
Confidence 1 2333456666666654332 1 12334679999999999 1 2468999988887544
No 79
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=94.26 E-value=0.084 Score=58.30 Aligned_cols=67 Identities=12% Similarity=0.175 Sum_probs=47.2
Q ss_pred CCeEEEEecCCCcccCchHHHHHHHHcCCCCccceeeceeCCeEeEEEEEeecCeEEEEEcCCccccccCCh-HHHHHHH
Q 012876 362 GLRIWVYSGDTDGRVPVTSTRYSINKMGLKIKEEWRAWFHKHQVAGWVETYEKGLTLVTVRGAGHQVPAFAP-AQSLSLF 440 (454)
Q Consensus 362 ~~rVliy~Gd~D~i~~~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~Gy~~~~~~~Ltf~~V~gAGHmvP~dqP-~~a~~~i 440 (454)
+.+.|+.+|..|.-|.+..+..++++|+-.|.. ...++..+..|-.-.-.+ ...+..+
T Consensus 682 ~~~~LliHGt~DdnVh~q~s~~~~~aL~~~gv~---------------------~~~~vypde~H~is~~~~~~~~~~~~ 740 (755)
T KOG2100|consen 682 TPKLLLIHGTEDDNVHFQQSAILIKALQNAGVP---------------------FRLLVYPDENHGISYVEVISHLYEKL 740 (755)
T ss_pred cCCEEEEEcCCcCCcCHHHHHHHHHHHHHCCCc---------------------eEEEEeCCCCcccccccchHHHHHHH
Confidence 345899999999999999999999998866653 344566677777644333 3456667
Q ss_pred HHHHcCCCCC
Q 012876 441 TKFLSAATLP 450 (454)
Q Consensus 441 ~~fl~~~~~~ 450 (454)
.+|+. +.+.
T Consensus 741 ~~~~~-~~~~ 749 (755)
T KOG2100|consen 741 DRFLR-DCFG 749 (755)
T ss_pred HHHHH-HHcC
Confidence 77776 5443
No 80
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=94.04 E-value=0.26 Score=50.71 Aligned_cols=72 Identities=13% Similarity=0.090 Sum_probs=48.5
Q ss_pred ccceEEEeCCCccCCCCcCCCCCCcccChHHhHHHHHHHHHHHHHHCCCCCCCCeEEEcccccc---------cccCcce
Q 012876 126 AANMLFLEAPVGVGFSYTNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAD---------SFINLKG 196 (454)
Q Consensus 126 ~anvlyIDqPvGtGfSy~~~~~~~~~~~~~~~A~~~~~fL~~f~~~fp~~~~~~~yI~GESYgG---------~~inLkG 196 (454)
..|||-+|-| |-|-|....... +...+|+++.++|+...... .+.-.+++|.|+|.|| .+-.|.+
T Consensus 73 d~nVI~VDw~-g~g~s~y~~a~~----~t~~vg~~la~lI~~L~~~~-gl~l~~VhLIGHSLGAhIAg~ag~~~p~rV~r 146 (442)
T TIGR03230 73 SANVIVVDWL-SRAQQHYPTSAA----YTKLVGKDVAKFVNWMQEEF-NYPWDNVHLLGYSLGAHVAGIAGSLTKHKVNR 146 (442)
T ss_pred CCEEEEEECC-CcCCCCCccccc----cHHHHHHHHHHHHHHHHHhh-CCCCCcEEEEEECHHHHHHHHHHHhCCcceeE
Confidence 4799999987 444332111111 44667888888777655433 3445689999999999 3456888
Q ss_pred eeeeccc
Q 012876 197 FMIGNAV 203 (454)
Q Consensus 197 i~iGng~ 203 (454)
|++.+|.
T Consensus 147 ItgLDPA 153 (442)
T TIGR03230 147 ITGLDPA 153 (442)
T ss_pred EEEEcCC
Confidence 9988875
No 81
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=93.23 E-value=0.68 Score=44.53 Aligned_cols=109 Identities=17% Similarity=0.221 Sum_probs=73.4
Q ss_pred CCeEEEeCCCCCchhhchhhhhhcCCeEEcCCCCcccccCCCcccccceEEEeCCCccCCCCcCCCC----CCcccChHH
Q 012876 81 KPLVLWLNGGPGCSSIAYGAAQELGPFLVGGNGSRLKFNKYSWNKAANMLFLEAPVGVGFSYTNNSE----DLHKLGDQV 156 (454)
Q Consensus 81 ~PlilWlnGGPG~SS~~~g~f~E~GP~~~~~~~~~l~~N~~sW~~~anvlyIDqPvGtGfSy~~~~~----~~~~~~~~~ 156 (454)
+++++|+-|-||.-.. |--|.+. |.++- +....|+=|... |+|...... +-..++.++
T Consensus 2 ~~li~~IPGNPGlv~f-Y~~Fl~~-----------L~~~l---~~~~~i~~ish~---Gh~~~~~~~~~~~~~~~~sL~~ 63 (266)
T PF10230_consen 2 RPLIVFIPGNPGLVEF-YEEFLSA-----------LYEKL---NPQFEILGISHA---GHSTSPSNSKFSPNGRLFSLQD 63 (266)
T ss_pred cEEEEEECCCCChHHH-HHHHHHH-----------HHHhC---CCCCeeEEecCC---CCcCCcccccccCCCCccCHHH
Confidence 6899999999999888 7666532 33331 345566666643 666554431 111247888
Q ss_pred hHHHHHHHHHHHHHHCCCCCCCCeEEEcccccc----------c--ccCcceeeeecccccCCC
Q 012876 157 TANDSYAFLIGWFKRFPNFKSHDFYIAGESYAD----------S--FINLKGFMIGNAVINDPT 208 (454)
Q Consensus 157 ~A~~~~~fL~~f~~~fp~~~~~~~yI~GESYgG----------~--~inLkGi~iGng~~~p~~ 208 (454)
+.+.-.+||+++....+ ..+.+++|.|||-|. . ..+++++++.=|.+....
T Consensus 64 QI~hk~~~i~~~~~~~~-~~~~~liLiGHSIGayi~levl~r~~~~~~~V~~~~lLfPTi~~ia 126 (266)
T PF10230_consen 64 QIEHKIDFIKELIPQKN-KPNVKLILIGHSIGAYIALEVLKRLPDLKFRVKKVILLFPTIEDIA 126 (266)
T ss_pred HHHHHHHHHHHHhhhhc-CCCCcEEEEeCcHHHHHHHHHHHhccccCCceeEEEEeCCcccccc
Confidence 99999999999988653 246789999999999 2 356666666666654443
No 82
>PRK10566 esterase; Provisional
Probab=91.93 E-value=0.25 Score=46.44 Aligned_cols=103 Identities=13% Similarity=0.130 Sum_probs=57.6
Q ss_pred eEEEEEEecCCCCCCCeEEEeCCCCCchhhchhhhhhcCCeEEcCCCCcccccCCCcccccceEEEeCCCccCCCCcCCC
Q 012876 67 LFYWFFEAQKGVSSKPLVLWLNGGPGCSSIAYGAAQELGPFLVGGNGSRLKFNKYSWNKAANMLFLEAPVGVGFSYTNNS 146 (454)
Q Consensus 67 lfy~f~es~~~~~~~PlilWlnGGPG~SS~~~g~f~E~GP~~~~~~~~~l~~N~~sW~~~anvlyIDqPvGtGfSy~~~~ 146 (454)
.+|-++++.......|+||.+.|++|.... +..+.. .+.. +-.+++.+|.| |.|-|+....
T Consensus 13 ~~~~~~p~~~~~~~~p~vv~~HG~~~~~~~-~~~~~~-----------~l~~------~G~~v~~~d~~-g~G~~~~~~~ 73 (249)
T PRK10566 13 EVLHAFPAGQRDTPLPTVFFYHGFTSSKLV-YSYFAV-----------ALAQ------AGFRVIMPDAP-MHGARFSGDE 73 (249)
T ss_pred ceEEEcCCCCCCCCCCEEEEeCCCCcccch-HHHHHH-----------HHHh------CCCEEEEecCC-cccccCCCcc
Confidence 355555553333457999999999887655 332211 1111 12678889966 7776543221
Q ss_pred CC-Ccc-c-ChHHhHHHHHHHHHHHHHHCCCCCCCCeEEEcccccc
Q 012876 147 ED-LHK-L-GDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAD 189 (454)
Q Consensus 147 ~~-~~~-~-~~~~~A~~~~~fL~~f~~~fp~~~~~~~yI~GESYgG 189 (454)
.. ... + ......+++..++ .++...+.....+++|+|+|+||
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~~~~~i~v~G~S~Gg 118 (249)
T PRK10566 74 ARRLNHFWQILLQNMQEFPTLR-AAIREEGWLLDDRLAVGGASMGG 118 (249)
T ss_pred ccchhhHHHHHHHHHHHHHHHH-HHHHhcCCcCccceeEEeecccH
Confidence 11 000 0 1123345554444 44444545556789999999999
No 83
>PRK11460 putative hydrolase; Provisional
Probab=91.81 E-value=0.3 Score=45.90 Aligned_cols=62 Identities=16% Similarity=0.116 Sum_probs=46.0
Q ss_pred CCeEEEEecCCCcccCchHHHHHHHHcCCCCccceeeceeCCeEeEEEEEeecCeEEEEEcCCccccccCChHHHHHHHH
Q 012876 362 GLRIWVYSGDTDGRVPVTSTRYSINKMGLKIKEEWRAWFHKHQVAGWVETYEKGLTLVTVRGAGHQVPAFAPAQSLSLFT 441 (454)
Q Consensus 362 ~~rVliy~Gd~D~i~~~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~Gy~~~~~~~Ltf~~V~gAGHmvP~dqP~~a~~~i~ 441 (454)
+.+|++.+|..|.++|....+...+.|+=. +.+.++.++.++||.+..+.-+.+.+.++
T Consensus 148 ~~pvli~hG~~D~vvp~~~~~~~~~~L~~~---------------------g~~~~~~~~~~~gH~i~~~~~~~~~~~l~ 206 (232)
T PRK11460 148 ATTIHLIHGGEDPVIDVAHAVAAQEALISL---------------------GGDVTLDIVEDLGHAIDPRLMQFALDRLR 206 (232)
T ss_pred CCcEEEEecCCCCccCHHHHHHHHHHHHHC---------------------CCCeEEEEECCCCCCCCHHHHHHHHHHHH
Confidence 579999999999999999988887776411 11577888899999996544445555555
Q ss_pred HHH
Q 012876 442 KFL 444 (454)
Q Consensus 442 ~fl 444 (454)
+++
T Consensus 207 ~~l 209 (232)
T PRK11460 207 YTV 209 (232)
T ss_pred HHc
Confidence 554
No 84
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=91.74 E-value=1.1 Score=45.25 Aligned_cols=96 Identities=22% Similarity=0.231 Sum_probs=66.4
Q ss_pred CCCCCeEEEeCCCCCchh------hchhhhhhcCCeEEcCCCCcccccCCCcccccceEEEeCCCccCCCCcCCCCCCcc
Q 012876 78 VSSKPLVLWLNGGPGCSS------IAYGAAQELGPFLVGGNGSRLKFNKYSWNKAANMLFLEAPVGVGFSYTNNSEDLHK 151 (454)
Q Consensus 78 ~~~~PlilWlnGGPG~SS------~~~g~f~E~GP~~~~~~~~~l~~N~~sW~~~anvlyIDqPvGtGfSy~~~~~~~~~ 151 (454)
..++|+++.+-|=.|.|. + ....++.| |++. |=.+.|.|-|--.++.-|..
T Consensus 122 ~~~~P~vvilpGltg~S~~~YVr~l-v~~a~~~G-~r~V---------------------VfN~RG~~g~~LtTpr~f~a 178 (409)
T KOG1838|consen 122 DGTDPIVVILPGLTGGSHESYVRHL-VHEAQRKG-YRVV---------------------VFNHRGLGGSKLTTPRLFTA 178 (409)
T ss_pred CCCCcEEEEecCCCCCChhHHHHHH-HHHHHhCC-cEEE---------------------EECCCCCCCCccCCCceeec
Confidence 467899999999999884 4 35666777 4432 11268989888777765543
Q ss_pred cChHHhHHHHHHHHHHHHHHCCCCCCCCeEEEcccccc------------cccCcceeeeeccc
Q 012876 152 LGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAD------------SFINLKGFMIGNAV 203 (454)
Q Consensus 152 ~~~~~~A~~~~~fL~~f~~~fp~~~~~~~yI~GESYgG------------~~inLkGi~iGng~ 203 (454)
.. .+|+-++++---++|| .+++|.+|.|+|| ..--..|++|-|||
T Consensus 179 -g~---t~Dl~~~v~~i~~~~P---~a~l~avG~S~Gg~iL~nYLGE~g~~~~l~~a~~v~~Pw 235 (409)
T KOG1838|consen 179 -GW---TEDLREVVNHIKKRYP---QAPLFAVGFSMGGNILTNYLGEEGDNTPLIAAVAVCNPW 235 (409)
T ss_pred -CC---HHHHHHHHHHHHHhCC---CCceEEEEecchHHHHHHHhhhccCCCCceeEEEEeccc
Confidence 33 3445555554446777 5699999999999 23346788888888
No 85
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=91.71 E-value=1.1 Score=44.70 Aligned_cols=120 Identities=13% Similarity=0.080 Sum_probs=64.5
Q ss_pred CceeEEEEEEecCCCCCCCeEEEeCCCCCchhhc-h------hhhhhc-CCeEEcCCCCcccccCCCcccccceEEEeCC
Q 012876 64 HKALFYWFFEAQKGVSSKPLVLWLNGGPGCSSIA-Y------GAAQEL-GPFLVGGNGSRLKFNKYSWNKAANMLFLEAP 135 (454)
Q Consensus 64 ~~~lfy~f~es~~~~~~~PlilWlnGGPG~SS~~-~------g~f~E~-GP~~~~~~~~~l~~N~~sW~~~anvlyIDqP 135 (454)
+.+++|.-+...+ ...+|.||.+.|=.|.+-.. | |.+... ||-+ .+ =.+...||-+|.|
T Consensus 15 ~~~~~y~~~g~~~-~~~~~~vll~Hg~~~~~~~~~~~~~~~~~~w~~~~~~~~------~l------~~~~~~vi~~D~~ 81 (351)
T TIGR01392 15 DVRVAYETYGTLN-AERSNAVLVCHALTGDAHVAGYHDDGDPGWWDDLIGPGR------AI------DTDRYFVVCSNVL 81 (351)
T ss_pred CceEEEEeccccC-CCCCCEEEEcCCcCcchhhcccCCCCCCCchhhccCCCC------Cc------CCCceEEEEecCC
Confidence 4578887664311 23468899999877755331 0 011100 1100 00 0134689999977
Q ss_pred Cc--cCCCCcCC--CC--CC----cccChHHhHHHHHHHHHHHHHHCCCCCCCC-eEEEcccccc---------cccCcc
Q 012876 136 VG--VGFSYTNN--SE--DL----HKLGDQVTANDSYAFLIGWFKRFPNFKSHD-FYIAGESYAD---------SFINLK 195 (454)
Q Consensus 136 vG--tGfSy~~~--~~--~~----~~~~~~~~A~~~~~fL~~f~~~fp~~~~~~-~yI~GESYgG---------~~inLk 195 (454)
| .|-|-..+ .. .+ ..++-++.++++..+++. . .-.+ ++|+|+|+|| .+-.++
T Consensus 82 -G~~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----l---~~~~~~~l~G~S~Gg~ia~~~a~~~p~~v~ 153 (351)
T TIGR01392 82 -GGCYGSTGPSSINPGGRPYGSDFPLITIRDDVKAQKLLLDH----L---GIEQIAAVVGGSMGGMQALEWAIDYPERVR 153 (351)
T ss_pred -CCCCCCCCCCCCCCCCCcCCCCCCCCcHHHHHHHHHHHHHH----c---CCCCceEEEEECHHHHHHHHHHHHChHhhh
Confidence 6 44442111 00 01 011344455555555443 2 2235 8999999999 345689
Q ss_pred eeeeecccc
Q 012876 196 GFMIGNAVI 204 (454)
Q Consensus 196 Gi~iGng~~ 204 (454)
++++.++..
T Consensus 154 ~lvl~~~~~ 162 (351)
T TIGR01392 154 AIVVLATSA 162 (351)
T ss_pred eEEEEccCC
Confidence 999998754
No 86
>PRK10162 acetyl esterase; Provisional
Probab=91.23 E-value=0.53 Score=46.48 Aligned_cols=49 Identities=8% Similarity=0.101 Sum_probs=31.5
Q ss_pred hHHHHHHHHHHHHHHCCCCCCCCeEEEcccccc------------c---ccCcceeeeecccccC
Q 012876 157 TANDSYAFLIGWFKRFPNFKSHDFYIAGESYAD------------S---FINLKGFMIGNAVIND 206 (454)
Q Consensus 157 ~A~~~~~fL~~f~~~fp~~~~~~~yI~GESYgG------------~---~inLkGi~iGng~~~p 206 (454)
.+.+.++++.+....+ .....++.|+|+|.|| . ...++|+++..|+++.
T Consensus 134 D~~~a~~~l~~~~~~~-~~d~~~i~l~G~SaGG~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~~ 197 (318)
T PRK10162 134 EIVAVCCYFHQHAEDY-GINMSRIGFAGDSAGAMLALASALWLRDKQIDCGKVAGVLLWYGLYGL 197 (318)
T ss_pred HHHHHHHHHHHhHHHh-CCChhHEEEEEECHHHHHHHHHHHHHHhcCCCccChhheEEECCccCC
Confidence 3444455555444433 2334689999999999 1 2467888888887764
No 87
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=90.58 E-value=0.49 Score=40.06 Aligned_cols=86 Identities=19% Similarity=0.229 Sum_probs=53.7
Q ss_pred eEEEeCCCCCchhhchhhhhhcCCeEEcCCCCcccccCCCcccccceEEEeCCCccCCCCcCCCCCCcccChHHhHHHHH
Q 012876 83 LVLWLNGGPGCSSIAYGAAQELGPFLVGGNGSRLKFNKYSWNKAANMLFLEAPVGVGFSYTNNSEDLHKLGDQVTANDSY 162 (454)
Q Consensus 83 lilWlnGGPG~SS~~~g~f~E~GP~~~~~~~~~l~~N~~sW~~~anvlyIDqPvGtGfSy~~~~~~~~~~~~~~~A~~~~ 162 (454)
+||+++|+-|.+.. +..+.+. +..+ -.+++.+|.| |.|.+. ....+++++
T Consensus 1 ~vv~~HG~~~~~~~-~~~~~~~-----------l~~~------G~~v~~~~~~-~~~~~~-----------~~~~~~~~~ 50 (145)
T PF12695_consen 1 VVVLLHGWGGSRRD-YQPLAEA-----------LAEQ------GYAVVAFDYP-GHGDSD-----------GADAVERVL 50 (145)
T ss_dssp EEEEECTTTTTTHH-HHHHHHH-----------HHHT------TEEEEEESCT-TSTTSH-----------HSHHHHHHH
T ss_pred CEEEECCCCCCHHH-HHHHHHH-----------HHHC------CCEEEEEecC-CCCccc-----------hhHHHHHHH
Confidence 58999999887666 4444431 1111 2567888865 666551 111344433
Q ss_pred HHHHHHHHHCCCCCCCCeEEEcccccc--------cccCcceeeeeccc
Q 012876 163 AFLIGWFKRFPNFKSHDFYIAGESYAD--------SFINLKGFMIGNAV 203 (454)
Q Consensus 163 ~fL~~f~~~fp~~~~~~~yI~GESYgG--------~~inLkGi~iGng~ 203 (454)
+.+. ..++ ..++++|+|.|.|| ....++++++.+|+
T Consensus 51 ~~~~---~~~~--~~~~i~l~G~S~Gg~~a~~~~~~~~~v~~~v~~~~~ 94 (145)
T PF12695_consen 51 ADIR---AGYP--DPDRIILIGHSMGGAIAANLAARNPRVKAVVLLSPY 94 (145)
T ss_dssp HHHH---HHHC--TCCEEEEEEETHHHHHHHHHHHHSTTESEEEEESES
T ss_pred HHHH---hhcC--CCCcEEEEEEccCcHHHHHHhhhccceeEEEEecCc
Confidence 3332 3333 45689999999999 23789999999994
No 88
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=89.73 E-value=0.68 Score=45.19 Aligned_cols=59 Identities=17% Similarity=0.175 Sum_probs=47.1
Q ss_pred CCeEEEEecCCCcccCchHHHHHHHHcCCCCccceeeceeCCeEeEEEEEeecCeEEEEEcCCccccccCChHHHHHHHH
Q 012876 362 GLRIWVYSGDTDGRVPVTSTRYSINKMGLKIKEEWRAWFHKHQVAGWVETYEKGLTLVTVRGAGHQVPAFAPAQSLSLFT 441 (454)
Q Consensus 362 ~~rVliy~Gd~D~i~~~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~Gy~~~~~~~Ltf~~V~gAGHmvP~dqP~~a~~~i~ 441 (454)
.-+||+..|-.+.-++..-....... +. +..+..+++|||+|..|+|+.....|.
T Consensus 253 ~~pvlfi~g~~S~fv~~~~~~~~~~~------------------------fp-~~e~~~ld~aGHwVh~E~P~~~~~~i~ 307 (315)
T KOG2382|consen 253 TGPVLFIKGLQSKFVPDEHYPRMEKI------------------------FP-NVEVHELDEAGHWVHLEKPEEFIESIS 307 (315)
T ss_pred ccceeEEecCCCCCcChhHHHHHHHh------------------------cc-chheeecccCCceeecCCHHHHHHHHH
Confidence 57999999999888887755444333 22 566778888999999999999999999
Q ss_pred HHHc
Q 012876 442 KFLS 445 (454)
Q Consensus 442 ~fl~ 445 (454)
.|+.
T Consensus 308 ~Fl~ 311 (315)
T KOG2382|consen 308 EFLE 311 (315)
T ss_pred HHhc
Confidence 9885
No 89
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=89.48 E-value=0.22 Score=50.55 Aligned_cols=73 Identities=18% Similarity=0.131 Sum_probs=48.2
Q ss_pred ccceEEEeCCCccCCCCcCCCCCCcccChHHhHHHHHHHHHHHHHHCCCCCCCCeEEEcccccc---------cccCcce
Q 012876 126 AANMLFLEAPVGVGFSYTNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAD---------SFINLKG 196 (454)
Q Consensus 126 ~anvlyIDqPvGtGfSy~~~~~~~~~~~~~~~A~~~~~fL~~f~~~fp~~~~~~~yI~GESYgG---------~~inLkG 196 (454)
-..||-||-| |+|+|.... + + +..+.++..+..|+...|+.-..++.++|-|.|| ..-.|||
T Consensus 218 GiA~LtvDmP-G~G~s~~~~---l---~--~D~~~l~~aVLd~L~~~p~VD~~RV~~~G~SfGGy~AvRlA~le~~Rlka 288 (411)
T PF06500_consen 218 GIAMLTVDMP-GQGESPKWP---L---T--QDSSRLHQAVLDYLASRPWVDHTRVGAWGFSFGGYYAVRLAALEDPRLKA 288 (411)
T ss_dssp T-EEEEE--T-TSGGGTTT----S------S-CCHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHTTTT-SE
T ss_pred CCEEEEEccC-CCcccccCC---C---C--cCHHHHHHHHHHHHhcCCccChhheEEEEeccchHHHHHHHHhcccceee
Confidence 4678999998 999985321 1 1 1234566677778888999988899999999999 3467999
Q ss_pred eeeecccccCC
Q 012876 197 FMIGNAVINDP 207 (454)
Q Consensus 197 i~iGng~~~p~ 207 (454)
++.-.|.++..
T Consensus 289 vV~~Ga~vh~~ 299 (411)
T PF06500_consen 289 VVALGAPVHHF 299 (411)
T ss_dssp EEEES---SCG
T ss_pred EeeeCchHhhh
Confidence 88777766443
No 90
>PRK11460 putative hydrolase; Provisional
Probab=89.25 E-value=2.3 Score=39.90 Aligned_cols=45 Identities=7% Similarity=-0.107 Sum_probs=27.2
Q ss_pred HHHHHHHHHHHHHCCCCCCCCeEEEcccccc--------ccc-Ccceeeeecccc
Q 012876 159 NDSYAFLIGWFKRFPNFKSHDFYIAGESYAD--------SFI-NLKGFMIGNAVI 204 (454)
Q Consensus 159 ~~~~~fL~~f~~~fp~~~~~~~yI~GESYgG--------~~i-nLkGi~iGng~~ 204 (454)
..+.++++.+..+. ....++++|.|.|.|| ..- .+.+++..+|.+
T Consensus 85 ~~l~~~i~~~~~~~-~~~~~~i~l~GfS~Gg~~al~~a~~~~~~~~~vv~~sg~~ 138 (232)
T PRK11460 85 PTFIETVRYWQQQS-GVGASATALIGFSQGAIMALEAVKAEPGLAGRVIAFSGRY 138 (232)
T ss_pred HHHHHHHHHHHHhc-CCChhhEEEEEECHHHHHHHHHHHhCCCcceEEEEecccc
Confidence 34444444443333 4455689999999999 222 345577677754
No 91
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=88.34 E-value=1.4 Score=39.94 Aligned_cols=60 Identities=25% Similarity=0.299 Sum_probs=44.0
Q ss_pred cCCeEEEEecCCCcccCchHHHHHHHHcCCCCccceeeceeCCeEeEEEEEeecCeEEEEEcCCccccccCChHHHHHHH
Q 012876 361 AGLRIWVYSGDTDGRVPVTSTRYSINKMGLKIKEEWRAWFHKHQVAGWVETYEKGLTLVTVRGAGHQVPAFAPAQSLSLF 440 (454)
Q Consensus 361 ~~~rVliy~Gd~D~i~~~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~Gy~~~~~~~Ltf~~V~gAGHmvP~dqP~~a~~~i 440 (454)
...++++..|+.|.+.+......+...+.. ...++++.++||+...++|+...+.+
T Consensus 220 ~~~P~l~i~g~~d~~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~gH~~~~~~p~~~~~~i 275 (282)
T COG0596 220 ITVPTLIIHGEDDPVVPAELARRLAAALPN------------------------DARLVVIPGAGHFPHLEAPEAFAAAL 275 (282)
T ss_pred CCCCeEEEecCCCCcCCHHHHHHHHhhCCC------------------------CceEEEeCCCCCcchhhcHHHHHHHH
Confidence 369999999999966665543444444321 25678899999999999999776666
Q ss_pred HHHH
Q 012876 441 TKFL 444 (454)
Q Consensus 441 ~~fl 444 (454)
.+|+
T Consensus 276 ~~~~ 279 (282)
T COG0596 276 LAFL 279 (282)
T ss_pred HHHH
Confidence 6644
No 92
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=88.33 E-value=0.76 Score=42.49 Aligned_cols=59 Identities=20% Similarity=0.337 Sum_probs=40.9
Q ss_pred CCeEEEEecCCCcccCchHHHHHHHHcCCCCccceeeceeCCeEeEEEEEeecCeEEEEEcCCccccccCChHHHHHHHH
Q 012876 362 GLRIWVYSGDTDGRVPVTSTRYSINKMGLKIKEEWRAWFHKHQVAGWVETYEKGLTLVTVRGAGHQVPAFAPAQSLSLFT 441 (454)
Q Consensus 362 ~~rVliy~Gd~D~i~~~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~Gy~~~~~~~Ltf~~V~gAGHmvP~dqP~~a~~~i~ 441 (454)
+.+|++.+|+.|.++|....+...+.|+=. +.+++|.++.|.||-++ ...+..+.
T Consensus 155 ~~pi~~~hG~~D~vvp~~~~~~~~~~L~~~---------------------~~~v~~~~~~g~gH~i~----~~~~~~~~ 209 (216)
T PF02230_consen 155 KTPILIIHGDEDPVVPFEWAEKTAEFLKAA---------------------GANVEFHEYPGGGHEIS----PEELRDLR 209 (216)
T ss_dssp TS-EEEEEETT-SSSTHHHHHHHHHHHHCT---------------------T-GEEEEEETT-SSS------HHHHHHHH
T ss_pred CCcEEEEecCCCCcccHHHHHHHHHHHHhc---------------------CCCEEEEEcCCCCCCCC----HHHHHHHH
Confidence 579999999999999998887776665311 11588899999999995 46666677
Q ss_pred HHHc
Q 012876 442 KFLS 445 (454)
Q Consensus 442 ~fl~ 445 (454)
+||.
T Consensus 210 ~~l~ 213 (216)
T PF02230_consen 210 EFLE 213 (216)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 7775
No 93
>PRK11071 esterase YqiA; Provisional
Probab=88.13 E-value=1.5 Score=39.76 Aligned_cols=54 Identities=13% Similarity=0.153 Sum_probs=43.4
Q ss_pred CCeEEEEecCCCcccCchHHHHHHHHcCCCCccceeeceeCCeEeEEEEEeecCeEEEEEcCCccccccCChHHHHHHHH
Q 012876 362 GLRIWVYSGDTDGRVPVTSTRYSINKMGLKIKEEWRAWFHKHQVAGWVETYEKGLTLVTVRGAGHQVPAFAPAQSLSLFT 441 (454)
Q Consensus 362 ~~rVliy~Gd~D~i~~~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~Gy~~~~~~~Ltf~~V~gAGHmvP~dqP~~a~~~i~ 441 (454)
..+|+|.+|..|-++|+..+.+..++ .....++||+|-. ...+..++.+.
T Consensus 136 ~~~v~iihg~~De~V~~~~a~~~~~~----------------------------~~~~~~~ggdH~f--~~~~~~~~~i~ 185 (190)
T PRK11071 136 PDLIWLLQQTGDEVLDYRQAVAYYAA----------------------------CRQTVEEGGNHAF--VGFERYFNQIV 185 (190)
T ss_pred hhhEEEEEeCCCCcCCHHHHHHHHHh----------------------------cceEEECCCCcch--hhHHHhHHHHH
Confidence 46899999999999999988877553 2345789999998 33388889999
Q ss_pred HHHc
Q 012876 442 KFLS 445 (454)
Q Consensus 442 ~fl~ 445 (454)
+|+.
T Consensus 186 ~fl~ 189 (190)
T PRK11071 186 DFLG 189 (190)
T ss_pred HHhc
Confidence 8874
No 94
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=87.76 E-value=1.7 Score=40.05 Aligned_cols=91 Identities=15% Similarity=0.161 Sum_probs=56.4
Q ss_pred eEEEeCCCCCchhhchhhhhhcCCeEEcCCCCcccccCCCcccccceEEEeCCCccCCCCcCCCCCCcccChHHhHHHHH
Q 012876 83 LVLWLNGGPGCSSIAYGAAQELGPFLVGGNGSRLKFNKYSWNKAANMLFLEAPVGVGFSYTNNSEDLHKLGDQVTANDSY 162 (454)
Q Consensus 83 lilWlnGGPG~SS~~~g~f~E~GP~~~~~~~~~l~~N~~sW~~~anvlyIDqPvGtGfSy~~~~~~~~~~~~~~~A~~~~ 162 (454)
-||++-+|=|+++. |--|...=| .+ ..+|..|+.| |-+ .... ... +-++.|+...
T Consensus 2 ~lf~~p~~gG~~~~-y~~la~~l~-----------~~------~~~v~~i~~~-~~~--~~~~---~~~-si~~la~~y~ 56 (229)
T PF00975_consen 2 PLFCFPPAGGSASS-YRPLARALP-----------DD------VIGVYGIEYP-GRG--DDEP---PPD-SIEELASRYA 56 (229)
T ss_dssp EEEEESSTTCSGGG-GHHHHHHHT-----------TT------EEEEEEECST-TSC--TTSH---EES-SHHHHHHHHH
T ss_pred eEEEEcCCccCHHH-HHHHHHhCC-----------CC------eEEEEEEecC-CCC--CCCC---CCC-CHHHHHHHHH
Confidence 46778777676555 433332111 11 3668889966 544 1111 111 6777888877
Q ss_pred HHHHHHHHHCCCCCCCCeEEEcccccc------------cccCcceeeeecccc
Q 012876 163 AFLIGWFKRFPNFKSHDFYIAGESYAD------------SFINLKGFMIGNAVI 204 (454)
Q Consensus 163 ~fL~~f~~~fp~~~~~~~yI~GESYgG------------~~inLkGi~iGng~~ 204 (454)
+.|+. ..|+ -|++|+|.|+|| ....++.++|.++..
T Consensus 57 ~~I~~---~~~~---gp~~L~G~S~Gg~lA~E~A~~Le~~G~~v~~l~liD~~~ 104 (229)
T PF00975_consen 57 EAIRA---RQPE---GPYVLAGWSFGGILAFEMARQLEEAGEEVSRLILIDSPP 104 (229)
T ss_dssp HHHHH---HTSS---SSEEEEEETHHHHHHHHHHHHHHHTT-SESEEEEESCSS
T ss_pred HHhhh---hCCC---CCeeehccCccHHHHHHHHHHHHHhhhccCceEEecCCC
Confidence 76654 4442 399999999999 467788999988654
No 95
>PRK13604 luxD acyl transferase; Provisional
Probab=87.65 E-value=2.1 Score=41.93 Aligned_cols=57 Identities=11% Similarity=0.196 Sum_probs=44.8
Q ss_pred CCeEEEEecCCCcccCchHHHHHHHHcCCCCccceeeceeCCeEeEEEEEeecCeEEEEEcCCccccccCChHHHHHHHH
Q 012876 362 GLRIWVYSGDTDGRVPVTSTRYSINKMGLKIKEEWRAWFHKHQVAGWVETYEKGLTLVTVRGAGHQVPAFAPAQSLSLFT 441 (454)
Q Consensus 362 ~~rVliy~Gd~D~i~~~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~Gy~~~~~~~Ltf~~V~gAGHmvP~dqP~~a~~~i~ 441 (454)
+.+||+++|+.|.+|+..+++...++++ .+ +-.+..+.||+|.. ...+.....+.+
T Consensus 202 ~~PvLiIHG~~D~lVp~~~s~~l~e~~~----------------------s~-~kkl~~i~Ga~H~l-~~~~~~~~~~~~ 257 (307)
T PRK13604 202 DIPFIAFTANNDSWVKQSEVIDLLDSIR----------------------SE-QCKLYSLIGSSHDL-GENLVVLRNFYQ 257 (307)
T ss_pred CCCEEEEEcCCCCccCHHHHHHHHHHhc----------------------cC-CcEEEEeCCCcccc-CcchHHHHHHHH
Confidence 6899999999999999999999988753 12 56779999999998 445555545544
Q ss_pred H
Q 012876 442 K 442 (454)
Q Consensus 442 ~ 442 (454)
.
T Consensus 258 ~ 258 (307)
T PRK13604 258 S 258 (307)
T ss_pred H
Confidence 4
No 96
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=87.59 E-value=2.9 Score=43.14 Aligned_cols=37 Identities=16% Similarity=0.202 Sum_probs=33.3
Q ss_pred ChHHhHHHHHHHHHHHHHHCCCCCCCCeEEEcccccc
Q 012876 153 GDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAD 189 (454)
Q Consensus 153 ~~~~~A~~~~~fL~~f~~~fp~~~~~~~yI~GESYgG 189 (454)
+.+|+-.|+.+|++..-.+|+.-.+.|++.+|-||.|
T Consensus 147 Ss~QALaDla~fI~~~n~k~n~~~~~~WitFGgSYsG 183 (514)
T KOG2182|consen 147 SSLQALADLAEFIKAMNAKFNFSDDSKWITFGGSYSG 183 (514)
T ss_pred hHHHHHHHHHHHHHHHHhhcCCCCCCCeEEECCCchh
Confidence 7889999999999999899976666699999999999
No 97
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=87.58 E-value=1.7 Score=41.01 Aligned_cols=99 Identities=20% Similarity=0.293 Sum_probs=66.6
Q ss_pred CCCCeEEEeCCCCCchhhchhhhhhcCCeEEcCCCCcccccCCCcccccceEEEeCCCccCCCCcCCCCCCcccChHHhH
Q 012876 79 SSKPLVLWLNGGPGCSSIAYGAAQELGPFLVGGNGSRLKFNKYSWNKAANMLFLEAPVGVGFSYTNNSEDLHKLGDQVTA 158 (454)
Q Consensus 79 ~~~PlilWlnGGPG~SS~~~g~f~E~GP~~~~~~~~~l~~N~~sW~~~anvlyIDqPvGtGfSy~~~~~~~~~~~~~~~A 158 (454)
...+.+|...|- +.- +|...|+ ..+.|-.=..|+.=.| =-|-|.|.++..+. +.....
T Consensus 58 ~~~~~lly~hGN---a~D-lgq~~~~-------------~~~l~~~ln~nv~~~D-YSGyG~S~G~psE~----n~y~Di 115 (258)
T KOG1552|consen 58 AAHPTLLYSHGN---AAD-LGQMVEL-------------FKELSIFLNCNVVSYD-YSGYGRSSGKPSER----NLYADI 115 (258)
T ss_pred ccceEEEEcCCc---ccc-hHHHHHH-------------HHHHhhcccceEEEEe-cccccccCCCcccc----cchhhH
Confidence 345899998765 333 3433322 1222323356777788 57999999876654 566678
Q ss_pred HHHHHHHHHHHHHCCCC-CCCCeEEEcccccc-------cccCcceeeeeccccc
Q 012876 159 NDSYAFLIGWFKRFPNF-KSHDFYIAGESYAD-------SFINLKGFMIGNAVIN 205 (454)
Q Consensus 159 ~~~~~fL~~f~~~fp~~-~~~~~yI~GESYgG-------~~inLkGi~iGng~~~ 205 (454)
+..+++|++ ++ +..++.|.|.|-|. ..-.+.|+++-+|+++
T Consensus 116 ~avye~Lr~------~~g~~~~Iil~G~SiGt~~tv~Lasr~~~~alVL~SPf~S 164 (258)
T KOG1552|consen 116 KAVYEWLRN------RYGSPERIILYGQSIGTVPTVDLASRYPLAAVVLHSPFTS 164 (258)
T ss_pred HHHHHHHHh------hcCCCceEEEEEecCCchhhhhHhhcCCcceEEEeccchh
Confidence 888888876 44 56789999999998 2233788888887754
No 98
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=86.35 E-value=1.3 Score=37.32 Aligned_cols=44 Identities=23% Similarity=0.329 Sum_probs=35.1
Q ss_pred hcCCeEEEEecCCCcccCchHHHHHHHHcCCCCccceeeceeCCeEeEEEEEeecCeEEEEEcCCccc
Q 012876 360 NAGLRIWVYSGDTDGRVPVTSTRYSINKMGLKIKEEWRAWFHKHQVAGWVETYEKGLTLVTVRGAGHQ 427 (454)
Q Consensus 360 ~~~~rVliy~Gd~D~i~~~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~Gy~~~~~~~Ltf~~V~gAGHm 427 (454)
...++|++.+|+.|.+++....+.+.++++ . .-.+..|.|++|+
T Consensus 102 ~~~~pv~~i~g~~D~~~~~~~~~~~~~~~~-----------------------~-~~~~~~i~g~~H~ 145 (145)
T PF12695_consen 102 KIRIPVLFIHGENDPLVPPEQVRRLYEALP-----------------------G-PKELYIIPGAGHF 145 (145)
T ss_dssp TTTSEEEEEEETT-SSSHHHHHHHHHHHHC-----------------------S-SEEEEEETTS-TT
T ss_pred ccCCcEEEEEECCCCcCCHHHHHHHHHHcC-----------------------C-CcEEEEeCCCcCc
Confidence 447899999999999999999998888866 1 4566889999996
No 99
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=85.93 E-value=2.5 Score=39.74 Aligned_cols=104 Identities=21% Similarity=0.390 Sum_probs=55.5
Q ss_pred eeEEEEEEecCCCCCCCeEEEeCCCCCchhhchhhhhhcCCeEEcCCCCcccccCC----CcccccceEEEeCCCccCCC
Q 012876 66 ALFYWFFEAQKGVSSKPLVLWLNGGPGCSSIAYGAAQELGPFLVGGNGSRLKFNKY----SWNKAANMLFLEAPVGVGFS 141 (454)
Q Consensus 66 ~lfy~f~es~~~~~~~PlilWlnGGPG~SS~~~g~f~E~GP~~~~~~~~~l~~N~~----sW~~~anvlyIDqPvGtGfS 141 (454)
+.|=|-.-.+..-.++|+++|+-|-||-++. |--| |= .|..|-- =|+ +.++==.+.|..+==+
T Consensus 14 si~~~~~~v~~~~~~~~li~~IpGNPG~~gF-Y~~F---~~--------~L~~~l~~r~~~wt-Ish~~H~~~P~sl~~~ 80 (301)
T KOG3975|consen 14 SILTLKPWVTKSGEDKPLIVWIPGNPGLLGF-YTEF---AR--------HLHLNLIDRLPVWT-ISHAGHALMPASLRED 80 (301)
T ss_pred cceeeeeeeccCCCCceEEEEecCCCCchhH-HHHH---HH--------HHHHhcccccceeE-EeccccccCCcccccc
Confidence 3444433223334889999999999998665 5433 32 1111111 121 1111113344221111
Q ss_pred CcCCCCCCcccChHHhHHHHHHHHHHHHHHCCCCCCCCeEEEcccccc
Q 012876 142 YTNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAD 189 (454)
Q Consensus 142 y~~~~~~~~~~~~~~~A~~~~~fL~~f~~~fp~~~~~~~yI~GESYgG 189 (454)
......+. .+.+++.+.=.+|++++.- +++++||.|+|-|.
T Consensus 81 ~s~~~~ei--fsL~~QV~HKlaFik~~~P-----k~~ki~iiGHSiGa 121 (301)
T KOG3975|consen 81 HSHTNEEI--FSLQDQVDHKLAFIKEYVP-----KDRKIYIIGHSIGA 121 (301)
T ss_pred cccccccc--cchhhHHHHHHHHHHHhCC-----CCCEEEEEecchhH
Confidence 11111122 2566677777788887653 57799999999987
No 100
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=85.83 E-value=1.6 Score=43.54 Aligned_cols=61 Identities=18% Similarity=0.163 Sum_probs=46.3
Q ss_pred CCeEEEEecCCCcccCchHHHHHHHHcCCCCccceeeceeCCeEeEEEEEeecCeEEEEEcCCccccccCCh---HHHHH
Q 012876 362 GLRIWVYSGDTDGRVPVTSTRYSINKMGLKIKEEWRAWFHKHQVAGWVETYEKGLTLVTVRGAGHQVPAFAP---AQSLS 438 (454)
Q Consensus 362 ~~rVliy~Gd~D~i~~~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~Gy~~~~~~~Ltf~~V~gAGHmvP~dqP---~~a~~ 438 (454)
..+|++.+|..|.+++....+.+.+.+. + . ..++.++ .+||+.+.+.+ +....
T Consensus 286 ~~Pvliv~G~~D~i~~~~~~~~~~~~~~--~--------------------~-~~~~~~~-~~gH~~~~~~~~~~~~v~~ 341 (350)
T TIGR01836 286 KMPILNIYAERDHLVPPDASKALNDLVS--S--------------------E-DYTELSF-PGGHIGIYVSGKAQKEVPP 341 (350)
T ss_pred CCCeEEEecCCCCcCCHHHHHHHHHHcC--C--------------------C-CeEEEEc-CCCCEEEEECchhHhhhhH
Confidence 7899999999999999999888877754 0 1 3344444 58999988866 56677
Q ss_pred HHHHHHcC
Q 012876 439 LFTKFLSA 446 (454)
Q Consensus 439 ~i~~fl~~ 446 (454)
-|.+|+..
T Consensus 342 ~i~~wl~~ 349 (350)
T TIGR01836 342 AIGKWLQA 349 (350)
T ss_pred HHHHHHHh
Confidence 77788753
No 101
>KOG3101 consensus Esterase D [General function prediction only]
Probab=85.67 E-value=17 Score=33.46 Aligned_cols=166 Identities=15% Similarity=0.173 Sum_probs=81.8
Q ss_pred eeEEEeEEecCC----CCceeEEE-EEEecCCC--CCCCeEEEeCCCCCch--------hhchhhhhhcCCeEEcCCCC-
Q 012876 51 KHYAGYVKLRPN----DHKALFYW-FFEAQKGV--SSKPLVLWLNGGPGCS--------SIAYGAAQELGPFLVGGNGS- 114 (454)
Q Consensus 51 ~~~sGyl~v~~~----~~~~lfy~-f~es~~~~--~~~PlilWlnGGPG~S--------S~~~g~f~E~GP~~~~~~~~- 114 (454)
+++-|+.-|-+. .+-.|=|- |++ ...+ +.-|+++||.| --|. +.- -.-.++|=..|.+|..
T Consensus 8 k~f~G~q~vy~H~S~tl~c~Mtf~vylP-p~a~~~k~~P~lf~LSG-LTCT~~Nfi~Ksg~q-q~As~hgl~vV~PDTSP 84 (283)
T KOG3101|consen 8 KCFGGRQKVYKHNSNTLKCSMTFGVYLP-PDAPRGKRCPVLFYLSG-LTCTHENFIEKSGFQ-QQASKHGLAVVAPDTSP 84 (283)
T ss_pred ccccceeeeeeccccccccceEEEEecC-CCcccCCcCceEEEecC-CcccchhhHhhhhHH-HhHhhcCeEEECCCCCC
Confidence 466676666431 12245444 444 3333 44699999984 3442 111 1223455556666631
Q ss_pred ---cccccCCCcccccceEEEeCCCccCCCCcCCCCCCcc-c-ChHHhHHHHHHHHHHHHHHCCCCCCCCeEEEcccccc
Q 012876 115 ---RLKFNKYSWNKAANMLFLEAPVGVGFSYTNNSEDLHK-L-GDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAD 189 (454)
Q Consensus 115 ---~l~~N~~sW~~~anvlyIDqPvGtGfSy~~~~~~~~~-~-~~~~~A~~~~~fL~~f~~~fp~~~~~~~yI~GESYgG 189 (454)
.+.--+-|| |-=.|.||=-..+.+.+.+ + --+-+.+.+-+.|.. .+-.+-..+.-|+|+|+||
T Consensus 85 RG~~v~g~~esw---------DFG~GAGFYvnAt~epw~~~yrMYdYv~kELp~~l~~---~~~pld~~k~~IfGHSMGG 152 (283)
T KOG3101|consen 85 RGVEVAGDDESW---------DFGQGAGFYVNATQEPWAKHYRMYDYVVKELPQLLNS---ANVPLDPLKVGIFGHSMGG 152 (283)
T ss_pred CccccCCCcccc---------cccCCceeEEecccchHhhhhhHHHHHHHHHHHHhcc---ccccccchhcceeccccCC
Confidence 122234466 3346777643322232221 0 012233333333331 2223334468899999999
Q ss_pred ---------cccCcceeeeecccccCCCccchhHHHhhhcccCCHHHHHHHH
Q 012876 190 ---------SFINLKGFMIGNAVINDPTDTKGLVDYAWSHAIISDKLYKDIS 232 (454)
Q Consensus 190 ---------~~inLkGi~iGng~~~p~~~~~s~~~f~~~~gli~~~~~~~l~ 232 (454)
..-..|++-.-.|.++|..--=..-.|.-..|- ++.+++...
T Consensus 153 hGAl~~~Lkn~~kykSvSAFAPI~NP~~cpWGqKAf~gYLG~-~ka~W~~yD 203 (283)
T KOG3101|consen 153 HGALTIYLKNPSKYKSVSAFAPICNPINCPWGQKAFTGYLGD-NKAQWEAYD 203 (283)
T ss_pred CceEEEEEcCcccccceeccccccCcccCcchHHHhhcccCC-ChHHHhhcc
Confidence 233567788888888887632222223223332 455555543
No 102
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=85.46 E-value=3.2 Score=38.65 Aligned_cols=26 Identities=19% Similarity=0.294 Sum_probs=22.4
Q ss_pred CCeEEEEecCCCcccCchHHHHHHHH
Q 012876 362 GLRIWVYSGDTDGRVPVTSTRYSINK 387 (454)
Q Consensus 362 ~~rVliy~Gd~D~i~~~~Gt~~~i~~ 387 (454)
+++++|++|+.|.+|+....+..+.+
T Consensus 169 ~~P~~v~hG~~D~tV~~~n~~~~~~q 194 (220)
T PF10503_consen 169 GYPRIVFHGTADTTVNPQNADQLVAQ 194 (220)
T ss_pred CCCEEEEecCCCCccCcchHHHHHHH
Confidence 57889999999999999888877766
No 103
>COG0400 Predicted esterase [General function prediction only]
Probab=84.85 E-value=1.4 Score=40.62 Aligned_cols=59 Identities=19% Similarity=0.284 Sum_probs=42.7
Q ss_pred CCeEEEEecCCCcccCchHHHHHHHHcCCCCccceeeceeCCeEeEEEEEeecCeEEEEEcCCccccccCChHHHHHHHH
Q 012876 362 GLRIWVYSGDTDGRVPVTSTRYSINKMGLKIKEEWRAWFHKHQVAGWVETYEKGLTLVTVRGAGHQVPAFAPAQSLSLFT 441 (454)
Q Consensus 362 ~~rVliy~Gd~D~i~~~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~Gy~~~~~~~Ltf~~V~gAGHmvP~dqP~~a~~~i~ 441 (454)
+.||++.+|..|.+||..-+++..+.|.=.|. +..+.++. .||.++. +.++.++
T Consensus 146 ~~pill~hG~~Dpvvp~~~~~~l~~~l~~~g~---------------------~v~~~~~~-~GH~i~~----e~~~~~~ 199 (207)
T COG0400 146 GTPILLSHGTEDPVVPLALAEALAEYLTASGA---------------------DVEVRWHE-GGHEIPP----EELEAAR 199 (207)
T ss_pred CCeEEEeccCcCCccCHHHHHHHHHHHHHcCC---------------------CEEEEEec-CCCcCCH----HHHHHHH
Confidence 79999999999999999998888776542222 34445555 9999954 5555556
Q ss_pred HHHcC
Q 012876 442 KFLSA 446 (454)
Q Consensus 442 ~fl~~ 446 (454)
+|+.+
T Consensus 200 ~wl~~ 204 (207)
T COG0400 200 SWLAN 204 (207)
T ss_pred HHHHh
Confidence 67654
No 104
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=84.56 E-value=1.9 Score=47.95 Aligned_cols=79 Identities=11% Similarity=0.126 Sum_probs=49.5
Q ss_pred cccceEEEeCCCccCCCCcCCCCCCcccChHHhHHHHHHHHHHH----HH------HCCCCCCCCeEEEcccccc-----
Q 012876 125 KAANMLFLEAPVGVGFSYTNNSEDLHKLGDQVTANDSYAFLIGW----FK------RFPNFKSHDFYIAGESYAD----- 189 (454)
Q Consensus 125 ~~anvlyIDqPvGtGfSy~~~~~~~~~~~~~~~A~~~~~fL~~f----~~------~fp~~~~~~~yI~GESYgG----- 189 (454)
+=..+|++| ..|+|-|-+.-.. +.. .+.+...+..++|..- .. .--.+.+-++-++|.||+|
T Consensus 278 rGYaVV~~D-~RGtg~SeG~~~~-~~~-~E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~SY~G~~~~~ 354 (767)
T PRK05371 278 RGFAVVYVS-GIGTRGSDGCPTT-GDY-QEIESMKAVIDWLNGRATAYTDRTRGKEVKADWSNGKVAMTGKSYLGTLPNA 354 (767)
T ss_pred CCeEEEEEc-CCCCCCCCCcCcc-CCH-HHHHHHHHHHHHHhhCCccccccccccccccCCCCCeeEEEEEcHHHHHHHH
Confidence 357899999 5799999876332 111 2333444444444320 00 0113445689999999999
Q ss_pred ----cccCcceeeeecccccC
Q 012876 190 ----SFINLKGFMIGNAVIND 206 (454)
Q Consensus 190 ----~~inLkGi~iGng~~~p 206 (454)
..-.||.|+...|+.+.
T Consensus 355 aAa~~pp~LkAIVp~a~is~~ 375 (767)
T PRK05371 355 VATTGVEGLETIIPEAAISSW 375 (767)
T ss_pred HHhhCCCcceEEEeeCCCCcH
Confidence 35679999988888663
No 105
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=84.54 E-value=1.9 Score=41.44 Aligned_cols=75 Identities=19% Similarity=0.172 Sum_probs=50.1
Q ss_pred cceEEEeCCCccCCCCcCCCCCCcccChHHhHHHHHHHHHHHHHHCCCCCCCCeEEEcccccc---------cccCccee
Q 012876 127 ANMLFLEAPVGVGFSYTNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAD---------SFINLKGF 197 (454)
Q Consensus 127 anvlyIDqPvGtGfSy~~~~~~~~~~~~~~~A~~~~~fL~~f~~~fp~~~~~~~yI~GESYgG---------~~inLkGi 197 (454)
..+|.+| ..|+|-|.+.-... ..+.++|.++ +.+|+... .+.+-++-++|-||+| ..--||.|
T Consensus 58 Y~vV~~D-~RG~g~S~G~~~~~-----~~~e~~D~~d-~I~W~~~Q-pws~G~VGm~G~SY~G~~q~~~A~~~~p~LkAi 129 (272)
T PF02129_consen 58 YAVVVQD-VRGTGGSEGEFDPM-----SPNEAQDGYD-TIEWIAAQ-PWSNGKVGMYGISYGGFTQWAAAARRPPHLKAI 129 (272)
T ss_dssp -EEEEEE--TTSTTS-S-B-TT-----SHHHHHHHHH-HHHHHHHC-TTEEEEEEEEEETHHHHHHHHHHTTT-TTEEEE
T ss_pred CEEEEEC-CcccccCCCccccC-----ChhHHHHHHH-HHHHHHhC-CCCCCeEEeeccCHHHHHHHHHHhcCCCCceEE
Confidence 5678899 68999998764331 3344556555 34577777 4555579999999999 46679999
Q ss_pred eeecccccCCCc
Q 012876 198 MIGNAVINDPTD 209 (454)
Q Consensus 198 ~iGng~~~p~~~ 209 (454)
+...+..|...+
T Consensus 130 ~p~~~~~d~~~~ 141 (272)
T PF02129_consen 130 VPQSGWSDLYRD 141 (272)
T ss_dssp EEESE-SBTCCT
T ss_pred EecccCCccccc
Confidence 999998877663
No 106
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=84.49 E-value=2.5 Score=42.58 Aligned_cols=60 Identities=23% Similarity=0.304 Sum_probs=41.0
Q ss_pred ccceEEEe-------CCCccCCCCcCCC-CCCcccChHHhHHHHHHHHHHHHHHCCCCCCCCeEEEcccccc
Q 012876 126 AANMLFLE-------APVGVGFSYTNNS-EDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAD 189 (454)
Q Consensus 126 ~anvlyID-------qPvGtGfSy~~~~-~~~~~~~~~~~A~~~~~fL~~f~~~fp~~~~~~~yI~GESYgG 189 (454)
.|-|||++ +|.|.- ||.+.. ..|- +.+|+-.|+.+.|+ ++++..-=+..|+..+|-||||
T Consensus 111 ~AllVFaEHRyYGeS~PFG~~-s~k~~~hlgyL--tseQALADfA~ll~-~lK~~~~a~~~pvIafGGSYGG 178 (492)
T KOG2183|consen 111 KALLVFAEHRYYGESLPFGSQ-SYKDARHLGYL--TSEQALADFAELLT-FLKRDLSAEASPVIAFGGSYGG 178 (492)
T ss_pred CceEEEeehhccccCCCCcch-hccChhhhccc--cHHHHHHHHHHHHH-HHhhccccccCcEEEecCchhh
Confidence 46677776 687777 554422 3443 68888888877665 4554433356689999999999
No 107
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=83.99 E-value=2 Score=44.96 Aligned_cols=88 Identities=19% Similarity=0.304 Sum_probs=61.6
Q ss_pred HHHHHHHHHhcCCeEEEEecCCCcccCchHHHHHHHHcCCCCccceeeceeCCeEeEEEEEeecCeEEEEEcCCcccc--
Q 012876 351 VLPIIQKLLNAGLRIWVYSGDTDGRVPVTSTRYSINKMGLKIKEEWRAWFHKHQVAGWVETYEKGLTLVTVRGAGHQV-- 428 (454)
Q Consensus 351 ~~~~l~~lL~~~~rVliy~Gd~D~i~~~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~Gy~~~~~~~Ltf~~V~gAGHmv-- 428 (454)
.-+.|....++|=|+|+|||..|.+++..+|..+-+++.=. .+|-....++=+-|..|+|.||-.
T Consensus 342 ~~pDLsaF~~~GGKLI~~HG~aD~~I~p~~ti~YY~~V~~~-------------~g~~~~~v~dF~RlF~vPGm~HC~gG 408 (474)
T PF07519_consen 342 TDPDLSAFRARGGKLILYHGWADPLIPPQGTIDYYERVVAR-------------MGGALADVDDFYRLFMVPGMGHCGGG 408 (474)
T ss_pred CCcCHHHHHhcCCeEEEEecCCCCccCCCcHHHHHHHHHHh-------------cccccccccceeEEEecCCCcccCCC
Confidence 33567777778999999999999999999999988776311 111100011125567799999986
Q ss_pred ccCChHHHHHHHHHHHcCCCCCC
Q 012876 429 PAFAPAQSLSLFTKFLSAATLPS 451 (454)
Q Consensus 429 P~dqP~~a~~~i~~fl~~~~~~~ 451 (454)
|-..|-.++..+.+|+.+-.-|+
T Consensus 409 ~g~~~~d~l~aL~~WVE~G~AP~ 431 (474)
T PF07519_consen 409 PGPDPFDALTALVDWVENGKAPE 431 (474)
T ss_pred CCCCCCCHHHHHHHHHhCCCCCC
Confidence 43456678888889998765553
No 108
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=83.73 E-value=1.4 Score=43.37 Aligned_cols=89 Identities=19% Similarity=0.197 Sum_probs=53.0
Q ss_pred CCCCCCCeEEEeCCCCCchhhchhhhhhcCCeEEcCCCCcccccCCCcc-----cccceEEEeCCCccCCCCcCCCCCCc
Q 012876 76 KGVSSKPLVLWLNGGPGCSSIAYGAAQELGPFLVGGNGSRLKFNKYSWN-----KAANMLFLEAPVGVGFSYTNNSEDLH 150 (454)
Q Consensus 76 ~~~~~~PlilWlnGGPG~SS~~~g~f~E~GP~~~~~~~~~l~~N~~sW~-----~~anvlyIDqPvGtGfSy~~~~~~~~ 150 (454)
.+++++-.||+.||- |.+.|+== -+..-...|. ..+||+..-- .|||+|.+..+.+
T Consensus 132 ~~a~~~RWiL~s~GN--------g~~~E~~~--------~~~~~~~~~~~~ak~~~aNvl~fNY-pGVg~S~G~~s~~-- 192 (365)
T PF05677_consen 132 PEAKPQRWILVSNGN--------GECYENRA--------MLDYKDDWIQRFAKELGANVLVFNY-PGVGSSTGPPSRK-- 192 (365)
T ss_pred CCCCCCcEEEEEcCC--------hHHhhhhh--------hhccccHHHHHHHHHcCCcEEEECC-CccccCCCCCCHH--
Confidence 356889999999976 33333300 0000111222 3589999985 5999997764321
Q ss_pred ccChHHhHHHHHHHHHHHHHHCC-CCCCCCeEEEcccccc
Q 012876 151 KLGDQVTANDSYAFLIGWFKRFP-NFKSHDFYIAGESYAD 189 (454)
Q Consensus 151 ~~~~~~~A~~~~~fL~~f~~~fp-~~~~~~~yI~GESYgG 189 (454)
+...+++...++ +...+ .-+.+.+.+.|+|-||
T Consensus 193 --dLv~~~~a~v~y----L~d~~~G~ka~~Ii~yG~SLGG 226 (365)
T PF05677_consen 193 --DLVKDYQACVRY----LRDEEQGPKAKNIILYGHSLGG 226 (365)
T ss_pred --HHHHHHHHHHHH----HHhcccCCChheEEEeeccccH
Confidence 343444444444 43332 3456789999999999
No 109
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=83.40 E-value=4.9 Score=42.11 Aligned_cols=48 Identities=13% Similarity=-0.022 Sum_probs=30.8
Q ss_pred hHHHHHHHHHHHHHHCCCCCCCCeEEEcccccc--------c---ccCcceeeeeccccc
Q 012876 157 TANDSYAFLIGWFKRFPNFKSHDFYIAGESYAD--------S---FINLKGFMIGNAVIN 205 (454)
Q Consensus 157 ~A~~~~~fL~~f~~~fp~~~~~~~yI~GESYgG--------~---~inLkGi~iGng~~~ 205 (454)
.....++++++-...|. -..+++.|+|+|+|| . .--++++++-+|...
T Consensus 156 D~~~al~wv~~~i~~fg-gd~~~v~~~G~SaG~~~~~~~~~~~~~~~lf~~~i~~sg~~~ 214 (493)
T cd00312 156 DQRLALKWVQDNIAAFG-GDPDSVTIFGESAGGASVSLLLLSPDSKGLFHRAISQSGSAL 214 (493)
T ss_pred HHHHHHHHHHHHHHHhC-CCcceEEEEeecHHHHHhhhHhhCcchhHHHHHHhhhcCCcc
Confidence 34455566777766664 345689999999999 1 112566666666543
No 110
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=80.45 E-value=16 Score=37.61 Aligned_cols=27 Identities=11% Similarity=0.118 Sum_probs=21.5
Q ss_pred CCeEEEcccccc---------cccCcceeeeecccc
Q 012876 178 HDFYIAGESYAD---------SFINLKGFMIGNAVI 204 (454)
Q Consensus 178 ~~~yI~GESYgG---------~~inLkGi~iGng~~ 204 (454)
....|+|.|||| .+-.+.+++..+|.+
T Consensus 288 ~~~~IaG~S~GGl~AL~~al~~Pd~Fg~v~s~Sgs~ 323 (411)
T PRK10439 288 DRTVVAGQSFGGLAALYAGLHWPERFGCVLSQSGSF 323 (411)
T ss_pred cceEEEEEChHHHHHHHHHHhCcccccEEEEeccce
Confidence 357999999999 345678888888865
No 111
>PLN02454 triacylglycerol lipase
Probab=79.52 E-value=3.2 Score=42.26 Aligned_cols=35 Identities=14% Similarity=0.201 Sum_probs=29.6
Q ss_pred hHHhHHHHHHHHHHHHHHCCCCCCCCeEEEcccccc
Q 012876 154 DQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAD 189 (454)
Q Consensus 154 ~~~~A~~~~~fL~~f~~~fp~~~~~~~yI~GESYgG 189 (454)
...+.+++...++...+++|..+- .++|+|||.||
T Consensus 205 ~~S~r~qvl~~V~~l~~~Yp~~~~-sI~vTGHSLGG 239 (414)
T PLN02454 205 KLSARSQLLAKIKELLERYKDEKL-SIVLTGHSLGA 239 (414)
T ss_pred hHHHHHHHHHHHHHHHHhCCCCCc-eEEEEecCHHH
Confidence 446888999999999999987543 69999999999
No 112
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=78.94 E-value=6.6 Score=36.12 Aligned_cols=51 Identities=10% Similarity=0.042 Sum_probs=32.6
Q ss_pred HhHHHHHHHHHHHHHHCCCCCCCCeEEEcccccc---------cccCcceeeeecccccCCC
Q 012876 156 VTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAD---------SFINLKGFMIGNAVINDPT 208 (454)
Q Consensus 156 ~~A~~~~~fL~~f~~~fp~~~~~~~yI~GESYgG---------~~inLkGi~iGng~~~p~~ 208 (454)
+.++.+.+++....+. ....++++|.|-|=|| .+-.+.|++..+|++-...
T Consensus 85 ~s~~~l~~li~~~~~~--~i~~~ri~l~GFSQGa~~al~~~l~~p~~~~gvv~lsG~~~~~~ 144 (216)
T PF02230_consen 85 ESAERLDELIDEEVAY--GIDPSRIFLGGFSQGAAMALYLALRYPEPLAGVVALSGYLPPES 144 (216)
T ss_dssp HHHHHHHHHHHHHHHT--T--GGGEEEEEETHHHHHHHHHHHCTSSTSSEEEEES---TTGC
T ss_pred HHHHHHHHHHHHHHHc--CCChhheehhhhhhHHHHHHHHHHHcCcCcCEEEEeeccccccc
Confidence 3444555555554433 2566789999999999 4568999999999986544
No 113
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=78.77 E-value=4 Score=42.13 Aligned_cols=65 Identities=15% Similarity=0.130 Sum_probs=46.2
Q ss_pred cChHHhHHHHHHHHHHHHHHCCCCCCCCeEEEcccccc---------cccCcceeeeecccccCCCccchhHHH
Q 012876 152 LGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAD---------SFINLKGFMIGNAVINDPTDTKGLVDY 216 (454)
Q Consensus 152 ~~~~~~A~~~~~fL~~f~~~fp~~~~~~~yI~GESYgG---------~~inLkGi~iGng~~~p~~~~~s~~~f 216 (454)
.+.+|+-.|+..|++.+-.++....+.|+.++|-|||| .+--+.|.+.-++.+....+...|.+.
T Consensus 87 Lt~~QALaD~a~F~~~~~~~~~~~~~~pwI~~GgSY~G~Laaw~r~kyP~~~~ga~ASSapv~a~~df~~y~~~ 160 (434)
T PF05577_consen 87 LTSEQALADLAYFIRYVKKKYNTAPNSPWIVFGGSYGGALAAWFRLKYPHLFDGAWASSAPVQAKVDFWEYFEV 160 (434)
T ss_dssp -SHHHHHHHHHHHHHHHHHHTTTGCC--EEEEEETHHHHHHHHHHHH-TTT-SEEEEET--CCHCCTTTHHHHH
T ss_pred cCHHHHHHHHHHHHHHHHHhhcCCCCCCEEEECCcchhHHHHHHHhhCCCeeEEEEeccceeeeecccHHHHHH
Confidence 48999999999999998888876677899999999999 222366777777777777665555443
No 114
>PF10081 Abhydrolase_9: Alpha/beta-hydrolase family; InterPro: IPR012037 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=77.05 E-value=5.7 Score=38.20 Aligned_cols=37 Identities=16% Similarity=0.343 Sum_probs=31.1
Q ss_pred ChHHhHHHHHHHHHHHHHHCCCCCCCCeEEEcccccc
Q 012876 153 GDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAD 189 (454)
Q Consensus 153 ~~~~~A~~~~~fL~~f~~~fp~~~~~~~yI~GESYgG 189 (454)
.-.+++..|.+.+......-|+=..-++|++|||-|.
T Consensus 84 ~a~~a~~aL~~aV~~~~~~lP~~~RPkL~l~GeSLGa 120 (289)
T PF10081_consen 84 AAREAARALFEAVYARWSTLPEDRRPKLYLYGESLGA 120 (289)
T ss_pred hHHHHHHHHHHHHHHHHHhCCcccCCeEEEeccCccc
Confidence 3456888899999999999998777779999999985
No 115
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=76.82 E-value=49 Score=32.04 Aligned_cols=88 Identities=14% Similarity=0.090 Sum_probs=48.5
Q ss_pred HHHHHHHHhcCCeEEEEecCCCcccCchHHHHHHHHcCCCCccceeecee--CC---eE-eEEEEEeecCeEEEEEcCCc
Q 012876 352 LPIIQKLLNAGLRIWVYSGDTDGRVPVTSTRYSINKMGLKIKEEWRAWFH--KH---QV-AGWVETYEKGLTLVTVRGAG 425 (454)
Q Consensus 352 ~~~l~~lL~~~~rVliy~Gd~D~i~~~~Gt~~~i~~L~w~~~~~~~~w~~--~~---~~-~Gy~~~~~~~Ltf~~V~gAG 425 (454)
.+.++.+-++.+||||..|-.|.++--.=.+..+... .+.+.+.--.. +. ++ --|.. -. .-.-|.+..-|
T Consensus 202 ~~~I~~ln~~~ikvli~ygg~DhLIEeeI~~E~a~~f--~~l~Hf~~~~~~seee~~kI~~~f~~-~~-~~~sv~f~~dg 277 (297)
T PF06342_consen 202 KEYIDKLNKKPIKVLIAYGGKDHLIEEEISFEFAMKF--KGLDHFNIEKEISEEEKPKILKSFAS-GQ-KGASVFFAKDG 277 (297)
T ss_pred HHHHHHhccCCCcEEEEEcCcchhhHHHHHHHHHHHh--CCccceeeecCCChhHHHHHHHHHhc-CC-ceeEEEEecCC
Confidence 4556666666799999999999988766555555443 22111110000 00 00 00000 01 22236688899
Q ss_pred cccccCChHHHHHHHHHH
Q 012876 426 HQVPAFAPAQSLSLFTKF 443 (454)
Q Consensus 426 HmvP~dqP~~a~~~i~~f 443 (454)
|+..-.|++-.-+.+...
T Consensus 278 Hf~qK~~A~lIA~~i~~m 295 (297)
T PF06342_consen 278 HFQQKFRADLIAEAIKKM 295 (297)
T ss_pred hHHhHHHHHHHHHHHHHh
Confidence 999988987655555543
No 116
>COG4099 Predicted peptidase [General function prediction only]
Probab=76.12 E-value=31 Score=33.58 Aligned_cols=43 Identities=9% Similarity=-0.016 Sum_probs=28.4
Q ss_pred HHHHHHHHHHHCCCCCCCCeEEEcccccc---------cccCcceeeeeccc
Q 012876 161 SYAFLIGWFKRFPNFKSHDFYIAGESYAD---------SFINLKGFMIGNAV 203 (454)
Q Consensus 161 ~~~fL~~f~~~fp~~~~~~~yI~GESYgG---------~~inLkGi~iGng~ 203 (454)
..+.+.+=+...+..-..++|+.|-|-|| .+--+.+.+...|-
T Consensus 252 ~idli~~vlas~ynID~sRIYviGlSrG~~gt~al~~kfPdfFAaa~~iaG~ 303 (387)
T COG4099 252 KIDLILEVLASTYNIDRSRIYVIGLSRGGFGTWALAEKFPDFFAAAVPIAGG 303 (387)
T ss_pred HHHHHHHHHhhccCcccceEEEEeecCcchhhHHHHHhCchhhheeeeecCC
Confidence 34444444455778888899999999999 23345555555554
No 117
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=75.49 E-value=7.6 Score=35.97 Aligned_cols=59 Identities=22% Similarity=0.241 Sum_probs=45.4
Q ss_pred CCeEEEEecCCCcccCchHHHHHHHHcCCCCccceeeceeCCeEeEEEEEeecCeEEEEEcCCccccccCChH--HHHHH
Q 012876 362 GLRIWVYSGDTDGRVPVTSTRYSINKMGLKIKEEWRAWFHKHQVAGWVETYEKGLTLVTVRGAGHQVPAFAPA--QSLSL 439 (454)
Q Consensus 362 ~~rVliy~Gd~D~i~~~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~Gy~~~~~~~Ltf~~V~gAGHmvP~dqP~--~a~~~ 439 (454)
.++.|-+.|+.|.+++..-.+..++.- . +- .+..+.+||+||.-.|. ...+.
T Consensus 163 ~~PSLHi~G~~D~iv~~~~s~~L~~~~------------------------~-~a-~vl~HpggH~VP~~~~~~~~i~~f 216 (230)
T KOG2551|consen 163 STPSLHIFGETDTIVPSERSEQLAESF------------------------K-DA-TVLEHPGGHIVPNKAKYKEKIADF 216 (230)
T ss_pred CCCeeEEecccceeecchHHHHHHHhc------------------------C-CC-eEEecCCCccCCCchHHHHHHHHH
Confidence 588999999999999999888777762 2 22 46788899999988763 45677
Q ss_pred HHHHHcC
Q 012876 440 FTKFLSA 446 (454)
Q Consensus 440 i~~fl~~ 446 (454)
|+.++..
T Consensus 217 i~~~~~~ 223 (230)
T KOG2551|consen 217 IQSFLQE 223 (230)
T ss_pred HHHHHHh
Confidence 7776653
No 118
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=75.39 E-value=3.3 Score=37.86 Aligned_cols=101 Identities=16% Similarity=0.100 Sum_probs=62.7
Q ss_pred CCCCCeEEEeCCCCCchhhchhhhhhcCCeEEcCCCCcccccCCCcccccceEEEeCCCccCCCCcCCCCCCcccChHHh
Q 012876 78 VSSKPLVLWLNGGPGCSSIAYGAAQELGPFLVGGNGSRLKFNKYSWNKAANMLFLEAPVGVGFSYTNNSEDLHKLGDQVT 157 (454)
Q Consensus 78 ~~~~PlilWlnGGPG~SS~~~g~f~E~GP~~~~~~~~~l~~N~~sW~~~anvlyIDqPvGtGfSy~~~~~~~~~~~~~~~ 157 (454)
...+||.|++.|| |-+-+-.--|.--. .-+.+|.|. -+-|||-++.... ..+++
T Consensus 64 ~~~~klfIfIHGG-------YW~~g~rk~clsiv--~~a~~~gY~------------vasvgY~l~~q~h-----tL~qt 117 (270)
T KOG4627|consen 64 TNQAKLFIFIHGG-------YWQEGDRKMCLSIV--GPAVRRGYR------------VASVGYNLCPQVH-----TLEQT 117 (270)
T ss_pred CCCccEEEEEecc-------hhhcCchhcccchh--hhhhhcCeE------------EEEeccCcCcccc-----cHHHH
Confidence 4678999999998 32221111110000 024445554 2456777765432 57788
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCeEEEcccccc----------cccCcceeeeecccccC
Q 012876 158 ANDSYAFLIGWFKRFPNFKSHDFYIAGESYAD----------SFINLKGFMIGNAVIND 206 (454)
Q Consensus 158 A~~~~~fL~~f~~~fp~~~~~~~yI~GESYgG----------~~inLkGi~iGng~~~p 206 (454)
..++.++++--++.+|.-+ .+-+.|+|-|. ....+.|+++..|+.+-
T Consensus 118 ~~~~~~gv~filk~~~n~k--~l~~gGHSaGAHLa~qav~R~r~prI~gl~l~~GvY~l 174 (270)
T KOG4627|consen 118 MTQFTHGVNFILKYTENTK--VLTFGGHSAGAHLAAQAVMRQRSPRIWGLILLCGVYDL 174 (270)
T ss_pred HHHHHHHHHHHHHhcccce--eEEEcccchHHHHHHHHHHHhcCchHHHHHHHhhHhhH
Confidence 8999999887777787543 48899999987 34456777777776543
No 119
>PRK11071 esterase YqiA; Provisional
Probab=75.21 E-value=5.1 Score=36.28 Aligned_cols=65 Identities=15% Similarity=0.169 Sum_probs=39.3
Q ss_pred CeEEEeCCCCCchhhchh------hhhhcCCeEEcCCCCcccccCCCcccccceEEEeCCCccCCCCcCCCCCCcccChH
Q 012876 82 PLVLWLNGGPGCSSIAYG------AAQELGPFLVGGNGSRLKFNKYSWNKAANMLFLEAPVGVGFSYTNNSEDLHKLGDQ 155 (454)
Q Consensus 82 PlilWlnGGPG~SS~~~g------~f~E~GP~~~~~~~~~l~~N~~sW~~~anvlyIDqPvGtGfSy~~~~~~~~~~~~~ 155 (454)
|.||.|.|-+|++.. +- .+.+.+| ..+++.+|-| |+ .+
T Consensus 2 p~illlHGf~ss~~~-~~~~~~~~~l~~~~~-------------------~~~v~~~dl~---g~-------------~~ 45 (190)
T PRK11071 2 STLLYLHGFNSSPRS-AKATLLKNWLAQHHP-------------------DIEMIVPQLP---PY-------------PA 45 (190)
T ss_pred CeEEEECCCCCCcch-HHHHHHHHHHHHhCC-------------------CCeEEeCCCC---CC-------------HH
Confidence 679999998888775 22 1122222 2346888877 32 01
Q ss_pred HhHHHHHHHHHHHHHHCCCCCCCCeEEEcccccc
Q 012876 156 VTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAD 189 (454)
Q Consensus 156 ~~A~~~~~fL~~f~~~fp~~~~~~~yI~GESYgG 189 (454)
+.+++ +.++.+.. ..++++|.|.|.||
T Consensus 46 ~~~~~----l~~l~~~~---~~~~~~lvG~S~Gg 72 (190)
T PRK11071 46 DAAEL----LESLVLEH---GGDPLGLVGSSLGG 72 (190)
T ss_pred HHHHH----HHHHHHHc---CCCCeEEEEECHHH
Confidence 23443 44444433 34589999999999
No 120
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=73.81 E-value=5.3 Score=37.80 Aligned_cols=60 Identities=18% Similarity=0.326 Sum_probs=44.2
Q ss_pred CCeEEEEecCCCcccCchHHHHHHHHcCCCCccceeeceeCCeEeEEEEEeecCeEEEEEcCCccccccCChHHHHHHHH
Q 012876 362 GLRIWVYSGDTDGRVPVTSTRYSINKMGLKIKEEWRAWFHKHQVAGWVETYEKGLTLVTVRGAGHQVPAFAPAQSLSLFT 441 (454)
Q Consensus 362 ~~rVliy~Gd~D~i~~~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~Gy~~~~~~~Ltf~~V~gAGHmvP~dqP~~a~~~i~ 441 (454)
+.||||++|..|-++|+.-..+.....+ +.....+|+||||--..--| .-.+.++
T Consensus 192 ~~PVLiiHgtdDevv~~sHg~~Lye~~k------------------------~~~epl~v~g~gH~~~~~~~-~yi~~l~ 246 (258)
T KOG1552|consen 192 TCPVLIIHGTDDEVVDFSHGKALYERCK------------------------EKVEPLWVKGAGHNDIELYP-EYIEHLR 246 (258)
T ss_pred cCCEEEEecccCceecccccHHHHHhcc------------------------ccCCCcEEecCCCcccccCH-HHHHHHH
Confidence 5799999999999999987666554422 13556899999999866555 4566666
Q ss_pred HHHcC
Q 012876 442 KFLSA 446 (454)
Q Consensus 442 ~fl~~ 446 (454)
+|+..
T Consensus 247 ~f~~~ 251 (258)
T KOG1552|consen 247 RFISS 251 (258)
T ss_pred HHHHH
Confidence 67653
No 121
>PRK13604 luxD acyl transferase; Provisional
Probab=73.37 E-value=24 Score=34.68 Aligned_cols=116 Identities=12% Similarity=0.182 Sum_probs=63.9
Q ss_pred CceeEEEEEEec-CCCCCCCeEEEeCCCCCchhhchhhhhhcCCeEEcCCCCcccccCCCcccccceEEEeCCCccCCCC
Q 012876 64 HKALFYWFFEAQ-KGVSSKPLVLWLNGGPGCSSIAYGAAQELGPFLVGGNGSRLKFNKYSWNKAANMLFLEAPVGVGFSY 142 (454)
Q Consensus 64 ~~~lfy~f~es~-~~~~~~PlilWlnGGPG~SS~~~g~f~E~GP~~~~~~~~~l~~N~~sW~~~anvlyIDqPvGtGfSy 142 (454)
+..|.=|+.+.+ +++...|++|-.. |.|+....+.-| -.+=+.+=.++|-.|.=-|.|=|-
T Consensus 19 G~~L~Gwl~~P~~~~~~~~~~vIi~H-Gf~~~~~~~~~~-----------------A~~La~~G~~vLrfD~rg~~GeS~ 80 (307)
T PRK13604 19 GQSIRVWETLPKENSPKKNNTILIAS-GFARRMDHFAGL-----------------AEYLSSNGFHVIRYDSLHHVGLSS 80 (307)
T ss_pred CCEEEEEEEcCcccCCCCCCEEEEeC-CCCCChHHHHHH-----------------HHHHHHCCCEEEEecCCCCCCCCC
Confidence 556666666654 3455667777654 666643201111 111123336788888543458774
Q ss_pred cCCCCCCcccChHHhHHHHHHHHHHHHHHCCCCCCCCeEEEcccccc-------cccCcceeeeeccccc
Q 012876 143 TNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAD-------SFINLKGFMIGNAVIN 205 (454)
Q Consensus 143 ~~~~~~~~~~~~~~~A~~~~~fL~~f~~~fp~~~~~~~yI~GESYgG-------~~inLkGi~iGng~~~ 205 (454)
++-. +. +......|+..++ +|++.. ...+++|.|+|.|| ...+++++++..|+.+
T Consensus 81 G~~~-~~---t~s~g~~Dl~aai-d~lk~~---~~~~I~LiG~SmGgava~~~A~~~~v~~lI~~sp~~~ 142 (307)
T PRK13604 81 GTID-EF---TMSIGKNSLLTVV-DWLNTR---GINNLGLIAASLSARIAYEVINEIDLSFLITAVGVVN 142 (307)
T ss_pred Cccc-cC---cccccHHHHHHHH-HHHHhc---CCCceEEEEECHHHHHHHHHhcCCCCCEEEEcCCccc
Confidence 4321 11 1111234443322 233332 13479999999999 3557999999999987
No 122
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=70.71 E-value=6.1 Score=33.32 Aligned_cols=31 Identities=16% Similarity=0.264 Sum_probs=25.1
Q ss_pred HhHHHHHHHHHHHHHHCCCCCCCCeEEEcccccc
Q 012876 156 VTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAD 189 (454)
Q Consensus 156 ~~A~~~~~fL~~f~~~fp~~~~~~~yI~GESYgG 189 (454)
...+.+.+.|++..+++| +.++.|+|||-||
T Consensus 45 ~~~~~~~~~l~~~~~~~~---~~~i~itGHSLGG 75 (140)
T PF01764_consen 45 SLYDQILDALKELVEKYP---DYSIVITGHSLGG 75 (140)
T ss_dssp HHHHHHHHHHHHHHHHST---TSEEEEEEETHHH
T ss_pred HHHHHHHHHHHHHHhccc---CccchhhccchHH
Confidence 455577778888888787 4689999999999
No 123
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=70.03 E-value=24 Score=39.30 Aligned_cols=91 Identities=13% Similarity=0.109 Sum_probs=51.4
Q ss_pred CCCeEEEeCCCCCchhhchhhhhhcCCeEEcCCCCcccccCCCcccccceEEEeCCCccCCCCcC---------CCC--C
Q 012876 80 SKPLVLWLNGGPGCSSIAYGAAQELGPFLVGGNGSRLKFNKYSWNKAANMLFLEAPVGVGFSYTN---------NSE--D 148 (454)
Q Consensus 80 ~~PlilWlnGGPG~SS~~~g~f~E~GP~~~~~~~~~l~~N~~sW~~~anvlyIDqPvGtGfSy~~---------~~~--~ 148 (454)
..|+|++++|=.|.... |-.+.+. |.. +-..+|-+|.| |.|-|... ... .
T Consensus 448 g~P~VVllHG~~g~~~~-~~~lA~~-----------La~------~Gy~VIaiDlp-GHG~S~~~~~~~~~~a~~~~~~~ 508 (792)
T TIGR03502 448 GWPVVIYQHGITGAKEN-ALAFAGT-----------LAA------AGVATIAIDHP-LHGARSFDANASGVNATNANVLA 508 (792)
T ss_pred CCcEEEEeCCCCCCHHH-HHHHHHH-----------HHh------CCcEEEEeCCC-CCCccccccccccccccccCccc
Confidence 35899999987777665 3333221 111 12347778865 77777222 011 1
Q ss_pred Cc--------ccChHHhHHHHHHHHHHHH------H---HCCCCCCCCeEEEcccccc
Q 012876 149 LH--------KLGDQVTANDSYAFLIGWF------K---RFPNFKSHDFYIAGESYAD 189 (454)
Q Consensus 149 ~~--------~~~~~~~A~~~~~fL~~f~------~---~fp~~~~~~~yI~GESYgG 189 (454)
|- .-+-.+...|+.......- . .+..+...++++.|||.||
T Consensus 509 y~Nl~~l~~aRDn~rQ~v~Dll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGg 566 (792)
T TIGR03502 509 YMNLASLLVARDNLRQSILDLLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGG 566 (792)
T ss_pred eeccccccccccCHHHHHHHHHHHHHHHhcccccccccccccCCCCCcEEEEecCHHH
Confidence 10 0045667777776444332 1 1233556799999999999
No 124
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=68.69 E-value=10 Score=40.57 Aligned_cols=115 Identities=20% Similarity=0.275 Sum_probs=69.2
Q ss_pred eeEEEEEEecC--CC-CCCCeEEEeCCCCCchhhchhhhhhcCCeEEcCCCCcccccCCCccccc----------ceEEE
Q 012876 66 ALFYWFFEAQK--GV-SSKPLVLWLNGGPGCSSIAYGAAQELGPFLVGGNGSRLKFNKYSWNKAA----------NMLFL 132 (454)
Q Consensus 66 ~lfy~f~es~~--~~-~~~PlilWlnGGPG~SS~~~g~f~E~GP~~~~~~~~~l~~N~~sW~~~a----------nvlyI 132 (454)
-+.|-.+-+-+ +| +.-|+++..-||||. .++.|.++|.+.. =|++|
T Consensus 624 ~~lYgmiyKPhn~~pgkkYptvl~VYGGP~V---------------------QlVnnsfkgi~ylR~~~LaslGy~Vv~I 682 (867)
T KOG2281|consen 624 LTLYGMIYKPHNFQPGKKYPTVLNVYGGPGV---------------------QLVNNSFKGIQYLRFCRLASLGYVVVFI 682 (867)
T ss_pred cEEEEEEEccccCCCCCCCceEEEEcCCCce---------------------EEeeccccceehhhhhhhhhcceEEEEE
Confidence 34555444332 23 458999999999986 5788888887742 35889
Q ss_pred eCCCccCCCCcCCCCCCcc-----cChHHhHHHHHHHHHHHHHHCCCCCC-CCeEEEcccccc--------cccC-ccee
Q 012876 133 EAPVGVGFSYTNNSEDLHK-----LGDQVTANDSYAFLIGWFKRFPNFKS-HDFYIAGESYAD--------SFIN-LKGF 197 (454)
Q Consensus 133 DqPvGtGfSy~~~~~~~~~-----~~~~~~A~~~~~fL~~f~~~fp~~~~-~~~yI~GESYgG--------~~in-LkGi 197 (454)
|.- |+- ..+..+.. -.. -.++|-.+.||-.-++.- |.. ..+-|-|-|||| ...+ ++-.
T Consensus 683 DnR-GS~----hRGlkFE~~ik~kmGq-VE~eDQVeglq~Laeq~g-fidmdrV~vhGWSYGGYLSlm~L~~~P~IfrvA 755 (867)
T KOG2281|consen 683 DNR-GSA----HRGLKFESHIKKKMGQ-VEVEDQVEGLQMLAEQTG-FIDMDRVGVHGWSYGGYLSLMGLAQYPNIFRVA 755 (867)
T ss_pred cCC-Ccc----ccchhhHHHHhhccCe-eeehhhHHHHHHHHHhcC-cccchheeEeccccccHHHHHHhhcCcceeeEE
Confidence 942 321 11111110 011 124455566666555542 333 348899999999 2333 6777
Q ss_pred eeecccccCCC
Q 012876 198 MIGNAVINDPT 208 (454)
Q Consensus 198 ~iGng~~~p~~ 208 (454)
+.|.|++++..
T Consensus 756 IAGapVT~W~~ 766 (867)
T KOG2281|consen 756 IAGAPVTDWRL 766 (867)
T ss_pred eccCcceeeee
Confidence 78888888765
No 125
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=68.59 E-value=5 Score=37.71 Aligned_cols=49 Identities=10% Similarity=0.103 Sum_probs=32.1
Q ss_pred HhHHHHHHHHHHHHHHCCCCCCCCeEEEcccccc-------------c-----ccCcceeeeecccccCC
Q 012876 156 VTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAD-------------S-----FINLKGFMIGNAVINDP 207 (454)
Q Consensus 156 ~~A~~~~~fL~~f~~~fp~~~~~~~yI~GESYgG-------------~-----~inLkGi~iGng~~~p~ 207 (454)
..+..|.+||+.+... -..++++|.+||.|+ . .-.|..|++.+|.++..
T Consensus 74 ~s~~~l~~~L~~L~~~---~~~~~I~ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~ApDid~d 140 (233)
T PF05990_consen 74 FSGPALARFLRDLARA---PGIKRIHILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAPDIDND 140 (233)
T ss_pred HHHHHHHHHHHHHHhc---cCCceEEEEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECCCCCHH
Confidence 3455555555554443 145689999999999 1 12577788888777654
No 126
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=66.80 E-value=13 Score=38.59 Aligned_cols=46 Identities=15% Similarity=0.153 Sum_probs=32.4
Q ss_pred CCccCCCCcCCCCCCcccChHHhHHHHHHHHHHHHHHCCCCCCCCeEEEcccccc
Q 012876 135 PVGVGFSYTNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAD 189 (454)
Q Consensus 135 PvGtGfSy~~~~~~~~~~~~~~~A~~~~~fL~~f~~~fp~~~~~~~yI~GESYgG 189 (454)
-.|.||+..... ..++..+++.+.++..++..+ .+++.|.|||.||
T Consensus 128 L~g~gYDwR~~~------~~~~~~~~Lk~lIe~~~~~~g---~~kV~LVGHSMGG 173 (440)
T PLN02733 128 LFGFGYDFRQSN------RLPETMDGLKKKLETVYKASG---GKKVNIISHSMGG 173 (440)
T ss_pred cccCCCCccccc------cHHHHHHHHHHHHHHHHHHcC---CCCEEEEEECHhH
Confidence 347777654311 234467788888888887554 5789999999999
No 127
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=65.89 E-value=9.6 Score=35.41 Aligned_cols=45 Identities=16% Similarity=0.266 Sum_probs=30.7
Q ss_pred hHHHHHHHHHHHHHHCCCCCCCCeEEEcccccc--------------cccCcceeeeecccc
Q 012876 157 TANDSYAFLIGWFKRFPNFKSHDFYIAGESYAD--------------SFINLKGFMIGNAVI 204 (454)
Q Consensus 157 ~A~~~~~fL~~f~~~fp~~~~~~~yI~GESYgG--------------~~inLkGi~iGng~~ 204 (454)
..+++...+....+++| +.+++++|||.|| ...+++.+..|.|-+
T Consensus 110 ~~~~~~~~~~~~~~~~p---~~~i~vtGHSLGGaiA~l~a~~l~~~~~~~~i~~~tFg~P~v 168 (229)
T cd00519 110 LYNQVLPELKSALKQYP---DYKIIVTGHSLGGALASLLALDLRLRGPGSDVTVYTFGQPRV 168 (229)
T ss_pred HHHHHHHHHHHHHhhCC---CceEEEEccCHHHHHHHHHHHHHHhhCCCCceEEEEeCCCCC
Confidence 44455566666666665 4579999999999 144567777777665
No 128
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=65.27 E-value=5.5 Score=36.13 Aligned_cols=35 Identities=14% Similarity=0.166 Sum_probs=27.0
Q ss_pred CCCCeEEEcccccc-------cccCcceeeeecccccCCCccc
Q 012876 176 KSHDFYIAGESYAD-------SFINLKGFMIGNAVINDPTDTK 211 (454)
Q Consensus 176 ~~~~~yI~GESYgG-------~~inLkGi~iGng~~~p~~~~~ 211 (454)
....+.|.|-|.|| ...+++. +|.||.+.|.....
T Consensus 57 ~~~~~~liGSSlGG~~A~~La~~~~~~a-vLiNPav~p~~~l~ 98 (187)
T PF05728_consen 57 KPENVVLIGSSLGGFYATYLAERYGLPA-VLINPAVRPYELLQ 98 (187)
T ss_pred CCCCeEEEEEChHHHHHHHHHHHhCCCE-EEEcCCCCHHHHHH
Confidence 34459999999999 4567777 78899998876543
No 129
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=65.12 E-value=9.6 Score=34.56 Aligned_cols=52 Identities=10% Similarity=0.082 Sum_probs=40.4
Q ss_pred ChHHhHHHHHHHHHHHHHHCCCCCCCCeEEEcccccc-------------cccCcceeeeecccccCC
Q 012876 153 GDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAD-------------SFINLKGFMIGNAVINDP 207 (454)
Q Consensus 153 ~~~~~A~~~~~fL~~f~~~fp~~~~~~~yI~GESYgG-------------~~inLkGi~iGng~~~p~ 207 (454)
+.+++|.|+-+.++.+.+ +++.+++.|.|-|+|. .+-.++++++..+-....
T Consensus 46 tP~~~a~Dl~~~i~~y~~---~w~~~~vvLiGYSFGADvlP~~~nrLp~~~r~~v~~v~Ll~p~~~~d 110 (192)
T PF06057_consen 46 TPEQTAADLARIIRHYRA---RWGRKRVVLIGYSFGADVLPFIYNRLPAALRARVAQVVLLSPSTTAD 110 (192)
T ss_pred CHHHHHHHHHHHHHHHHH---HhCCceEEEEeecCCchhHHHHHhhCCHHHHhheeEEEEeccCCcce
Confidence 788999999999998888 5567899999999998 244566777666654433
No 130
>COG4425 Predicted membrane protein [Function unknown]
Probab=65.05 E-value=14 Score=37.75 Aligned_cols=36 Identities=19% Similarity=0.455 Sum_probs=31.7
Q ss_pred hHHhHHHHHHHHHHHHHHCCCCCCCCeEEEcccccc
Q 012876 154 DQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAD 189 (454)
Q Consensus 154 ~~~~A~~~~~fL~~f~~~fp~~~~~~~yI~GESYgG 189 (454)
-.++|+.+.++.......-|+-..-++|+.|||-|.
T Consensus 373 g~~aa~aLf~aVy~yw~qLP~~sRPKLylhG~SLGa 408 (588)
T COG4425 373 GADAARALFEAVYGYWTQLPKSSRPKLYLHGESLGA 408 (588)
T ss_pred chhHHHHHHHHHHHHHHhCCcCCCCceEEecccccc
Confidence 346899999999999999999888889999999984
No 131
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=64.82 E-value=12 Score=36.88 Aligned_cols=53 Identities=15% Similarity=0.243 Sum_probs=37.2
Q ss_pred CCCCcccChHHhHHHHHHHHHHHHHHCCCCCCCCeEEEcccccc--------cccCcceeeeeccc
Q 012876 146 SEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAD--------SFINLKGFMIGNAV 203 (454)
Q Consensus 146 ~~~~~~~~~~~~A~~~~~fL~~f~~~fp~~~~~~~yI~GESYgG--------~~inLkGi~iGng~ 203 (454)
...|+. ++..+++.+.+|-.+=+ .|+..++.|.|-|-|| ...++|++++-.-+
T Consensus 284 G~P~p~-n~~nA~DaVvQfAI~~L----gf~~edIilygWSIGGF~~~waAs~YPdVkavvLDAtF 344 (517)
T KOG1553|consen 284 GLPYPV-NTLNAADAVVQFAIQVL----GFRQEDIILYGWSIGGFPVAWAASNYPDVKAVVLDATF 344 (517)
T ss_pred CCCCcc-cchHHHHHHHHHHHHHc----CCCccceEEEEeecCCchHHHHhhcCCCceEEEeecch
Confidence 334554 67667766665554432 5667799999999999 57789999875443
No 132
>COG0400 Predicted esterase [General function prediction only]
Probab=64.03 E-value=33 Score=31.59 Aligned_cols=55 Identities=11% Similarity=0.063 Sum_probs=43.7
Q ss_pred ChHHhHHHHHHHHHHHHHHCCCCCCCCeEEEcccccc---------cccCcceeeeecccccCCC
Q 012876 153 GDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAD---------SFINLKGFMIGNAVINDPT 208 (454)
Q Consensus 153 ~~~~~A~~~~~fL~~f~~~fp~~~~~~~yI~GESYgG---------~~inLkGi~iGng~~~p~~ 208 (454)
+.+..++.+.+||....+.+ ....+++++.|-|=|+ .+-.++|+++-.|..-+..
T Consensus 75 dl~~~~~~~~~~l~~~~~~~-gi~~~~ii~~GfSqGA~ial~~~l~~~~~~~~ail~~g~~~~~~ 138 (207)
T COG0400 75 DLDLETEKLAEFLEELAEEY-GIDSSRIILIGFSQGANIALSLGLTLPGLFAGAILFSGMLPLEP 138 (207)
T ss_pred hHHHHHHHHHHHHHHHHHHh-CCChhheEEEecChHHHHHHHHHHhCchhhccchhcCCcCCCCC
Confidence 45567778888888888877 4456789999999999 4567999999999876664
No 133
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=62.73 E-value=78 Score=30.73 Aligned_cols=50 Identities=12% Similarity=0.164 Sum_probs=33.9
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCeEEEcccccc-------------cccCcceeeeecccccCCC
Q 012876 158 ANDSYAFLIGWFKRFPNFKSHDFYIAGESYAD-------------SFINLKGFMIGNAVINDPT 208 (454)
Q Consensus 158 A~~~~~fL~~f~~~fp~~~~~~~yI~GESYgG-------------~~inLkGi~iGng~~~p~~ 208 (454)
+.+.+.++..=-..+ ....+++.|+|+|-|| ....+++.++..|++|...
T Consensus 133 ~~~a~~~l~~~~~~~-g~dp~~i~v~GdSAGG~La~~~a~~~~~~~~~~p~~~~li~P~~d~~~ 195 (312)
T COG0657 133 AYAAYRWLRANAAEL-GIDPSRIAVAGDSAGGHLALALALAARDRGLPLPAAQVLISPLLDLTS 195 (312)
T ss_pred HHHHHHHHHhhhHhh-CCCccceEEEecCcccHHHHHHHHHHHhcCCCCceEEEEEecccCCcc
Confidence 444444444322222 2345689999999999 1356899999999998886
No 134
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=61.87 E-value=10 Score=34.41 Aligned_cols=32 Identities=13% Similarity=0.203 Sum_probs=26.7
Q ss_pred CCCCCeEEEcccccc------------c-ccCcceeeeecccccC
Q 012876 175 FKSHDFYIAGESYAD------------S-FINLKGFMIGNAVIND 206 (454)
Q Consensus 175 ~~~~~~yI~GESYgG------------~-~inLkGi~iGng~~~p 206 (454)
+...+++|+|+|-|| . ...++++++..|++|.
T Consensus 68 ~d~~~i~l~G~SAGg~la~~~~~~~~~~~~~~~~~~~~~~p~~d~ 112 (211)
T PF07859_consen 68 IDPERIVLIGDSAGGHLALSLALRARDRGLPKPKGIILISPWTDL 112 (211)
T ss_dssp EEEEEEEEEEETHHHHHHHHHHHHHHHTTTCHESEEEEESCHSST
T ss_pred ccccceEEeecccccchhhhhhhhhhhhcccchhhhhcccccccc
Confidence 556689999999999 1 2458999999999877
No 135
>PRK07868 acyl-CoA synthetase; Validated
Probab=61.62 E-value=15 Score=42.29 Aligned_cols=61 Identities=15% Similarity=0.090 Sum_probs=47.4
Q ss_pred CCeEEEEecCCCcccCchHHHHHHHHcCCCCccceeeceeCCeEeEEEEEeecCeEE-EEEcCCcccccc---CChHHHH
Q 012876 362 GLRIWVYSGDTDGRVPVTSTRYSINKMGLKIKEEWRAWFHKHQVAGWVETYEKGLTL-VTVRGAGHQVPA---FAPAQSL 437 (454)
Q Consensus 362 ~~rVliy~Gd~D~i~~~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~Gy~~~~~~~Ltf-~~V~gAGHmvP~---dqP~~a~ 437 (454)
..++|+..|..|.++|....+.+.+.+. +..+ ..+.++|||.+. .-|+...
T Consensus 297 ~~P~L~i~G~~D~ivp~~~~~~l~~~i~-------------------------~a~~~~~~~~~GH~g~~~g~~a~~~~w 351 (994)
T PRK07868 297 TCPVLAFVGEVDDIGQPASVRGIRRAAP-------------------------NAEVYESLIRAGHFGLVVGSRAAQQTW 351 (994)
T ss_pred CCCEEEEEeCCCCCCCHHHHHHHHHhCC-------------------------CCeEEEEeCCCCCEeeeechhhhhhhC
Confidence 6899999999999999999888877643 4444 567899999544 3566667
Q ss_pred HHHHHHHcCC
Q 012876 438 SLFTKFLSAA 447 (454)
Q Consensus 438 ~~i~~fl~~~ 447 (454)
..|.+||...
T Consensus 352 p~i~~wl~~~ 361 (994)
T PRK07868 352 PTVADWVKWL 361 (994)
T ss_pred hHHHHHHHHh
Confidence 7888888754
No 136
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=61.03 E-value=11 Score=34.71 Aligned_cols=39 Identities=21% Similarity=0.353 Sum_probs=28.7
Q ss_pred HHHHHHCCCCCCCCeEEEcccccc--------cccCcceeeeecccc
Q 012876 166 IGWFKRFPNFKSHDFYIAGESYAD--------SFINLKGFMIGNAVI 204 (454)
Q Consensus 166 ~~f~~~fp~~~~~~~yI~GESYgG--------~~inLkGi~iGng~~ 204 (454)
.+|++.+|+...+++-|.|-|.|| ..-.++.++..||..
T Consensus 10 i~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~~~i~avVa~~ps~ 56 (213)
T PF08840_consen 10 IDWLKSHPEVDPDKIGIIGISKGAELALLLASRFPQISAVVAISPSS 56 (213)
T ss_dssp HHHHHCSTTB--SSEEEEEETHHHHHHHHHHHHSSSEEEEEEES--S
T ss_pred HHHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcCCCccEEEEeCCce
Confidence 358888999998999999999999 233788888888764
No 137
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=60.24 E-value=13 Score=37.74 Aligned_cols=51 Identities=20% Similarity=0.124 Sum_probs=40.1
Q ss_pred hHHHHHHHHHHHHHHCCCCCC-CCeEEEcccccc---------cccCcceeeeecccccCC
Q 012876 157 TANDSYAFLIGWFKRFPNFKS-HDFYIAGESYAD---------SFINLKGFMIGNAVINDP 207 (454)
Q Consensus 157 ~A~~~~~fL~~f~~~fp~~~~-~~~yI~GESYgG---------~~inLkGi~iGng~~~p~ 207 (454)
+|.|...+|....+.||.... .|+...|.|||| .+-.+.||+=-++++-|.
T Consensus 162 qAiD~INAl~~l~k~~~~~~~~lp~I~~G~s~G~yla~l~~k~aP~~~~~~iDns~~~~p~ 222 (403)
T PF11144_consen 162 QAIDIINALLDLKKIFPKNGGGLPKIYIGSSHGGYLAHLCAKIAPWLFDGVIDNSSYALPP 222 (403)
T ss_pred HHHHHHHHHHHHHHhhhcccCCCcEEEEecCcHHHHHHHHHhhCccceeEEEecCccccch
Confidence 788999999999999999986 788889999999 334466666666666554
No 138
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=58.45 E-value=17 Score=32.35 Aligned_cols=44 Identities=25% Similarity=0.368 Sum_probs=34.9
Q ss_pred CCeEEEEecCCCcccCchHHHHHHHHcCCCCccceeeceeCCeEeEEEEEeecCeEEEEEcCCccccccC
Q 012876 362 GLRIWVYSGDTDGRVPVTSTRYSINKMGLKIKEEWRAWFHKHQVAGWVETYEKGLTLVTVRGAGHQVPAF 431 (454)
Q Consensus 362 ~~rVliy~Gd~D~i~~~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~Gy~~~~~~~Ltf~~V~gAGHmvP~d 431 (454)
.++.+++.++.|..|++.-++.+.+++ +..++.+.++||+...+
T Consensus 114 ~~~~~viaS~nDp~vp~~~a~~~A~~l--------------------------~a~~~~~~~~GHf~~~~ 157 (171)
T PF06821_consen 114 PFPSIVIASDNDPYVPFERAQRLAQRL--------------------------GAELIILGGGGHFNAAS 157 (171)
T ss_dssp HCCEEEEEETTBSSS-HHHHHHHHHHH--------------------------T-EEEEETS-TTSSGGG
T ss_pred CCCeEEEEcCCCCccCHHHHHHHHHHc--------------------------CCCeEECCCCCCccccc
Confidence 366699999999999999999998885 46789999999998654
No 139
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=58.13 E-value=14 Score=37.71 Aligned_cols=44 Identities=5% Similarity=-0.151 Sum_probs=29.6
Q ss_pred ChHHhHHHHHHHHHHHHHHCCCCCCCCeE-EEcccccc---------cccCcceeeeeccc
Q 012876 153 GDQVTANDSYAFLIGWFKRFPNFKSHDFY-IAGESYAD---------SFINLKGFMIGNAV 203 (454)
Q Consensus 153 ~~~~~A~~~~~fL~~f~~~fp~~~~~~~y-I~GESYgG---------~~inLkGi~iGng~ 203 (454)
+-.+.++++..+|+. +.-++++ |.|+|+|| .+-.++++++.++.
T Consensus 142 t~~d~~~~~~~ll~~-------lgi~~~~~vvG~SmGG~ial~~a~~~P~~v~~lv~ia~~ 195 (389)
T PRK06765 142 TILDFVRVQKELIKS-------LGIARLHAVMGPSMGGMQAQEWAVHYPHMVERMIGVIGN 195 (389)
T ss_pred cHHHHHHHHHHHHHH-------cCCCCceEEEEECHHHHHHHHHHHHChHhhheEEEEecC
Confidence 455556665555543 2234565 89999999 45568999998775
No 140
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=56.85 E-value=12 Score=34.48 Aligned_cols=32 Identities=19% Similarity=0.299 Sum_probs=26.4
Q ss_pred HhHHHHHHHHHHHHHHCCCCCCCCeEEEcccccc
Q 012876 156 VTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAD 189 (454)
Q Consensus 156 ~~A~~~~~fL~~f~~~fp~~~~~~~yI~GESYgG 189 (454)
-+-.|+..+...|++.++ ++|||.|+|||=|+
T Consensus 75 ~ay~DV~~AF~~yL~~~n--~GRPfILaGHSQGs 106 (207)
T PF11288_consen 75 LAYSDVRAAFDYYLANYN--NGRPFILAGHSQGS 106 (207)
T ss_pred hhHHHHHHHHHHHHHhcC--CCCCEEEEEeChHH
Confidence 355677888888888876 58999999999987
No 141
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=56.77 E-value=13 Score=31.97 Aligned_cols=31 Identities=19% Similarity=0.290 Sum_probs=22.3
Q ss_pred HhHHHHHHHHHHHHHHCCCCCCCCeEEEcccccc
Q 012876 156 VTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAD 189 (454)
Q Consensus 156 ~~A~~~~~fL~~f~~~fp~~~~~~~yI~GESYgG 189 (454)
.+++++...+++....+| ..+++|+|+|.||
T Consensus 9 ~~~~~i~~~~~~~~~~~p---~~~i~v~GHSlGg 39 (153)
T cd00741 9 SLANLVLPLLKSALAQYP---DYKIHVTGHSLGG 39 (153)
T ss_pred HHHHHHHHHHHHHHHHCC---CCeEEEEEcCHHH
Confidence 355555666666666566 4589999999999
No 142
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=54.21 E-value=28 Score=32.79 Aligned_cols=61 Identities=23% Similarity=0.288 Sum_probs=46.3
Q ss_pred CeEEEEecCCCcccCchHHHHHHHHcCCCCccceeeceeCCeEeEEEEEeecCeEEEEEcCCccccccCChH---HHHHH
Q 012876 363 LRIWVYSGDTDGRVPVTSTRYSINKMGLKIKEEWRAWFHKHQVAGWVETYEKGLTLVTVRGAGHQVPAFAPA---QSLSL 439 (454)
Q Consensus 363 ~rVliy~Gd~D~i~~~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~Gy~~~~~~~Ltf~~V~gAGHmvP~dqP~---~a~~~ 439 (454)
.++|+.+|..|.+++....+....... .. ......+.+++|....+.+. .++.-
T Consensus 233 ~P~l~~~G~~D~~vp~~~~~~~~~~~~----------------------~~-~~~~~~~~~~~H~~~~~~~~~~~~~~~~ 289 (299)
T COG1073 233 RPVLLVHGERDEVVPLRDAEDLYEAAR----------------------ER-PKKLLFVPGGGHIDLYDNPPAVEQALDK 289 (299)
T ss_pred cceEEEecCCCcccchhhhHHHHhhhc----------------------cC-CceEEEecCCccccccCccHHHHHHHHH
Confidence 799999999999999887777765522 11 35678889999999986655 57777
Q ss_pred HHHHHcC
Q 012876 440 FTKFLSA 446 (454)
Q Consensus 440 i~~fl~~ 446 (454)
+.+|+..
T Consensus 290 ~~~f~~~ 296 (299)
T COG1073 290 LAEFLER 296 (299)
T ss_pred HHHHHHH
Confidence 7777654
No 143
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=54.13 E-value=56 Score=32.30 Aligned_cols=130 Identities=11% Similarity=0.094 Sum_probs=62.4
Q ss_pred CceeEEEEEEecCCCCCCCeEEEeCCCCCchhhch---hhhhhcCCeEEcCC--CCc-ccccCCCcccccceEEEeCCCc
Q 012876 64 HKALFYWFFEAQKGVSSKPLVLWLNGGPGCSSIAY---GAAQELGPFLVGGN--GSR-LKFNKYSWNKAANMLFLEAPVG 137 (454)
Q Consensus 64 ~~~lfy~f~es~~~~~~~PlilWlnGGPG~SS~~~---g~f~E~GP~~~~~~--~~~-l~~N~~sW~~~anvlyIDqPvG 137 (454)
+..++=|++.-+.....-|.||-+.|..|.+.. + -.+...|=..+..+ |.. ....+... ..+..
T Consensus 66 g~~V~g~l~~P~~~~~~~Pavv~~hGyg~~~~~-~~~~~~~a~~G~~vl~~d~rGqg~~~~d~~~~---------~~~~~ 135 (320)
T PF05448_consen 66 GSRVYGWLYRPKNAKGKLPAVVQFHGYGGRSGD-PFDLLPWAAAGYAVLAMDVRGQGGRSPDYRGS---------SGGTL 135 (320)
T ss_dssp GEEEEEEEEEES-SSSSEEEEEEE--TT--GGG-HHHHHHHHHTT-EEEEE--TTTSSSS-B-SSB---------SSS-S
T ss_pred CCEEEEEEEecCCCCCCcCEEEEecCCCCCCCC-cccccccccCCeEEEEecCCCCCCCCCCcccc---------CCCCC
Confidence 456666666555445788999999998888654 2 13445554443222 111 01111110 11222
Q ss_pred cCCCCcCCCCCCcccChHHhHHHHHHHHHHHHHHCCCCCCCCeEEEcccccc--------cccCcceeeeecccc
Q 012876 138 VGFSYTNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAD--------SFINLKGFMIGNAVI 204 (454)
Q Consensus 138 tGfSy~~~~~~~~~~~~~~~A~~~~~fL~~f~~~fp~~~~~~~yI~GESYgG--------~~inLkGi~iGng~~ 204 (454)
-|+-.......-.+.=-..+..|.+.++ .|+...|+.-.+.+.++|+|-|| ..-.++.++...|++
T Consensus 136 ~g~~~~g~~~~~e~~yyr~~~~D~~rav-d~l~slpevD~~rI~v~G~SqGG~lal~~aaLd~rv~~~~~~vP~l 209 (320)
T PF05448_consen 136 KGHITRGIDDNPEDYYYRRVYLDAVRAV-DFLRSLPEVDGKRIGVTGGSQGGGLALAAAALDPRVKAAAADVPFL 209 (320)
T ss_dssp SSSTTTTTTS-TTT-HHHHHHHHHHHHH-HHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSST-SEEEEESESS
T ss_pred ccHHhcCccCchHHHHHHHHHHHHHHHH-HHHHhCCCcCcceEEEEeecCchHHHHHHHHhCccccEEEecCCCc
Confidence 2332211000000000112345555544 46667899988899999999999 233466666666653
No 144
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=53.71 E-value=13 Score=34.33 Aligned_cols=49 Identities=18% Similarity=0.262 Sum_probs=31.5
Q ss_pred CCeEEEEecCCCcccCchHHHHHHHHcCCCCccceeeceeCCeEeEEEEEeecCeEEEEEcCCccccccCChHH
Q 012876 362 GLRIWVYSGDTDGRVPVTSTRYSINKMGLKIKEEWRAWFHKHQVAGWVETYEKGLTLVTVRGAGHQVPAFAPAQ 435 (454)
Q Consensus 362 ~~rVliy~Gd~D~i~~~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~Gy~~~~~~~Ltf~~V~gAGHmvP~dqP~~ 435 (454)
.+++|-..|..|.+++...++..... +.+. .-+....+||.+|...+..
T Consensus 161 ~iPtlHv~G~~D~~~~~~~s~~L~~~------------------------~~~~-~~v~~h~gGH~vP~~~~~~ 209 (212)
T PF03959_consen 161 SIPTLHVIGENDPVVPPERSEALAEM------------------------FDPD-ARVIEHDGGHHVPRKKEDV 209 (212)
T ss_dssp --EEEEEEETT-SSS-HHHHHHHHHH------------------------HHHH-EEEEEESSSSS----HHHH
T ss_pred CCCeEEEEeCCCCCcchHHHHHHHHh------------------------ccCC-cEEEEECCCCcCcCChhhc
Confidence 68999999999999998887777665 2213 5577888999999987653
No 145
>PLN02442 S-formylglutathione hydrolase
Probab=53.70 E-value=22 Score=34.25 Aligned_cols=48 Identities=15% Similarity=0.082 Sum_probs=32.6
Q ss_pred hHHHHHHHHHHHHHHCCCCCCCCeEEEcccccc---------cccCcceeeeecccccCC
Q 012876 157 TANDSYAFLIGWFKRFPNFKSHDFYIAGESYAD---------SFINLKGFMIGNAVINDP 207 (454)
Q Consensus 157 ~A~~~~~fL~~f~~~fp~~~~~~~yI~GESYgG---------~~inLkGi~iGng~~~p~ 207 (454)
..+++...+..++.. +...+++|+|.|+|| .+-.+++++..+|..++.
T Consensus 125 ~~~~l~~~i~~~~~~---~~~~~~~i~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~~~~~ 181 (283)
T PLN02442 125 VVKELPKLLSDNFDQ---LDTSRASIFGHSMGGHGALTIYLKNPDKYKSVSAFAPIANPI 181 (283)
T ss_pred HHHHHHHHHHHHHHh---cCCCceEEEEEChhHHHHHHHHHhCchhEEEEEEECCccCcc
Confidence 345555555555543 344578999999999 233478888888887754
No 146
>PLN02571 triacylglycerol lipase
Probab=53.59 E-value=15 Score=37.50 Aligned_cols=34 Identities=9% Similarity=0.108 Sum_probs=28.1
Q ss_pred HHhHHHHHHHHHHHHHHCCCCCCCCeEEEcccccc
Q 012876 155 QVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAD 189 (454)
Q Consensus 155 ~~~A~~~~~fL~~f~~~fp~~~~~~~yI~GESYgG 189 (454)
..+.+++...|+.+.+++|.. ..+++|+|||.||
T Consensus 204 ~Sar~qvl~eV~~L~~~y~~e-~~sI~VTGHSLGG 237 (413)
T PLN02571 204 TSARDQVLNEVGRLVEKYKDE-EISITICGHSLGA 237 (413)
T ss_pred hhHHHHHHHHHHHHHHhcCcc-cccEEEeccchHH
Confidence 456788888999999988764 3379999999999
No 147
>PLN03082 Iron-sulfur cluster assembly; Provisional
Probab=51.93 E-value=13 Score=32.90 Aligned_cols=66 Identities=26% Similarity=0.361 Sum_probs=47.7
Q ss_pred CCCCeEEEeCCCCCchhhchhhhhhcC----CeEEcCCCCcccccCCC--cccccceEEEeCCCccCCCC-cCC
Q 012876 79 SSKPLVLWLNGGPGCSSIAYGAAQELG----PFLVGGNGSRLKFNKYS--WNKAANMLFLEAPVGVGFSY-TNN 145 (454)
Q Consensus 79 ~~~PlilWlnGGPG~SS~~~g~f~E~G----P~~~~~~~~~l~~N~~s--W~~~anvlyIDqPvGtGfSy-~~~ 145 (454)
+..+|=|-+.|| |||++.|++=.+.- -..+..++-++.-.+.| +.+-+-|=|+|...|.||-. .++
T Consensus 76 ~~~~LRl~V~~g-GCSG~~Y~~~ld~~~~~~D~v~e~~Gv~vvVD~~s~~~L~Gs~IDYve~l~~~gF~f~~NP 148 (163)
T PLN03082 76 EDKMLRLSVETG-GCSGFQYVFELDDKTNSDDRVFEKDGVKLVVDNISYDFVKGATVDYVEELIRSAFVVSTNP 148 (163)
T ss_pred CCceEEEEEecC-CCCCceeeeEEccCCCCCCEEEecCCeEEEECHHHHHHhCCCEEEeecCCCCCeeEEecCC
Confidence 346799999999 99998766654432 24555555566666654 66778899999999999987 443
No 148
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=50.85 E-value=83 Score=37.27 Aligned_cols=91 Identities=10% Similarity=0.072 Sum_probs=57.7
Q ss_pred CCeEEEeCCCCCchhhchhhhhhcCCeEEcCCCCcccccCCCcccccceEEEeCCCccCCCCcCCCCCCcccChHHhHHH
Q 012876 81 KPLVLWLNGGPGCSSIAYGAAQELGPFLVGGNGSRLKFNKYSWNKAANMLFLEAPVGVGFSYTNNSEDLHKLGDQVTAND 160 (454)
Q Consensus 81 ~PlilWlnGGPG~SS~~~g~f~E~GP~~~~~~~~~l~~N~~sW~~~anvlyIDqPvGtGfSy~~~~~~~~~~~~~~~A~~ 160 (454)
.|-++.+.|+.|.+.. |..+.+. + .....++-+|.| |.|-+ . ... .+-++.|.+
T Consensus 1068 ~~~l~~lh~~~g~~~~-~~~l~~~-----------l-------~~~~~v~~~~~~-g~~~~--~-~~~---~~l~~la~~ 1121 (1296)
T PRK10252 1068 GPTLFCFHPASGFAWQ-FSVLSRY-----------L-------DPQWSIYGIQSP-RPDGP--M-QTA---TSLDEVCEA 1121 (1296)
T ss_pred CCCeEEecCCCCchHH-HHHHHHh-----------c-------CCCCcEEEEECC-CCCCC--C-CCC---CCHHHHHHH
Confidence 4667888998888777 5544431 1 123567778877 55533 1 111 167778888
Q ss_pred HHHHHHHHHHHCCCCCCCCeEEEcccccc------------cccCcceeeeeccc
Q 012876 161 SYAFLIGWFKRFPNFKSHDFYIAGESYAD------------SFINLKGFMIGNAV 203 (454)
Q Consensus 161 ~~~fL~~f~~~fp~~~~~~~yI~GESYgG------------~~inLkGi~iGng~ 203 (454)
+...++.. .| ..+++|.|+|+|| ....+..+++.+++
T Consensus 1122 ~~~~i~~~---~~---~~p~~l~G~S~Gg~vA~e~A~~l~~~~~~v~~l~l~~~~ 1170 (1296)
T PRK10252 1122 HLATLLEQ---QP---HGPYHLLGYSLGGTLAQGIAARLRARGEEVAFLGLLDTW 1170 (1296)
T ss_pred HHHHHHhh---CC---CCCEEEEEechhhHHHHHHHHHHHHcCCceeEEEEecCC
Confidence 77777642 22 3489999999999 23466677766654
No 149
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=50.83 E-value=89 Score=32.62 Aligned_cols=107 Identities=19% Similarity=0.355 Sum_probs=66.8
Q ss_pred eeEEEEEEecCCCCCCCeEEEeCCCCCchhhchhhhh--hcC-CeEEcCCCCcccccCCCcccccceEEEeCCCccCCCC
Q 012876 66 ALFYWFFEAQKGVSSKPLVLWLNGGPGCSSIAYGAAQ--ELG-PFLVGGNGSRLKFNKYSWNKAANMLFLEAPVGVGFSY 142 (454)
Q Consensus 66 ~lfy~f~es~~~~~~~PlilWlnGGPG~SS~~~g~f~--E~G-P~~~~~~~~~l~~N~~sW~~~anvlyIDqPvGtGfSy 142 (454)
.++|+|-+- .-.-||.+.|.|==..=+.. |.++ .+| ||.+=.| |.=-|=++
T Consensus 277 Ei~yYFnPG---D~KPPL~VYFSGyR~aEGFE-gy~MMk~Lg~PfLL~~D----------------------pRleGGaF 330 (511)
T TIGR03712 277 EFIYYFNPG---DFKPPLNVYFSGYRPAEGFE-GYFMMKRLGAPFLLIGD----------------------PRLEGGAF 330 (511)
T ss_pred eeEEecCCc---CCCCCeEEeeccCcccCcch-hHHHHHhcCCCeEEeec----------------------ccccccee
Confidence 456666322 24579999999965565553 5444 444 7765444 33333344
Q ss_pred cCCCCCCcccChHHhHHHHHHHHHHHHHHCCCCCCCCeEEEcccccc-------cccCcceeeeecccccCC
Q 012876 143 TNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAD-------SFINLKGFMIGNAVINDP 207 (454)
Q Consensus 143 ~~~~~~~~~~~~~~~A~~~~~fL~~f~~~fp~~~~~~~yI~GESYgG-------~~inLkGi~iGng~~~p~ 207 (454)
--.+.. -=+.+.+.+++-+..- .+..+++.+.|=|+|. ..++-.+|+||-|.++-.
T Consensus 331 YlGs~e--------yE~~I~~~I~~~L~~L-gF~~~qLILSGlSMGTfgAlYYga~l~P~AIiVgKPL~NLG 393 (511)
T TIGR03712 331 YLGSDE--------YEQGIINVIQEKLDYL-GFDHDQLILSGLSMGTFGALYYGAKLSPHAIIVGKPLVNLG 393 (511)
T ss_pred eeCcHH--------HHHHHHHHHHHHHHHh-CCCHHHeeeccccccchhhhhhcccCCCceEEEcCcccchh
Confidence 322222 2333444444444432 6778899999999998 689999999999998753
No 150
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=50.80 E-value=58 Score=28.66 Aligned_cols=64 Identities=13% Similarity=0.122 Sum_probs=37.6
Q ss_pred ccceEEEeCCCccCCCCcCCCCCCcccChHHhHHHHHHHHHHHHHHCCCCCCCCeEEEcccccc------------cccC
Q 012876 126 AANMLFLEAPVGVGFSYTNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAD------------SFIN 193 (454)
Q Consensus 126 ~anvlyIDqPvGtGfSy~~~~~~~~~~~~~~~A~~~~~fL~~f~~~fp~~~~~~~yI~GESYgG------------~~in 193 (454)
...++-+|.| |.|.+.. .. . +.+..++.....+.. ..+ ..++.++|+|+|| ....
T Consensus 25 ~~~v~~~~~~-g~~~~~~--~~---~-~~~~~~~~~~~~l~~---~~~---~~~~~l~g~s~Gg~~a~~~a~~l~~~~~~ 91 (212)
T smart00824 25 RRDVSALPLP-GFGPGEP--LP---A-SADALVEAQAEAVLR---AAG---GRPFVLVGHSSGGLLAHAVAARLEARGIP 91 (212)
T ss_pred CccEEEecCC-CCCCCCC--CC---C-CHHHHHHHHHHHHHH---hcC---CCCeEEEEECHHHHHHHHHHHHHHhCCCC
Confidence 3578888865 5554321 11 1 444455555444443 232 4589999999999 1234
Q ss_pred cceeeeecc
Q 012876 194 LKGFMIGNA 202 (454)
Q Consensus 194 LkGi~iGng 202 (454)
++++++.+.
T Consensus 92 ~~~l~~~~~ 100 (212)
T smart00824 92 PAAVVLLDT 100 (212)
T ss_pred CcEEEEEcc
Confidence 677766655
No 151
>COG1647 Esterase/lipase [General function prediction only]
Probab=50.63 E-value=50 Score=30.82 Aligned_cols=61 Identities=21% Similarity=0.228 Sum_probs=46.9
Q ss_pred CCeEEEEecCCCcccCchHHHHHHHHcCCCCccceeeceeCCeEeEEEEEeecCeEEEEEcCCccccccCCh-HHHHHHH
Q 012876 362 GLRIWVYSGDTDGRVPVTSTRYSINKMGLKIKEEWRAWFHKHQVAGWVETYEKGLTLVTVRGAGHQVPAFAP-AQSLSLF 440 (454)
Q Consensus 362 ~~rVliy~Gd~D~i~~~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~Gy~~~~~~~Ltf~~V~gAGHmvP~dqP-~~a~~~i 440 (454)
..+++|..|.+|-.++...++...+.+.=. .=...+..++||-.-.|.- +...+-+
T Consensus 181 ~~pt~vvq~~~D~mv~~~sA~~Iy~~v~s~-----------------------~KeL~~~e~SgHVIt~D~Erd~v~e~V 237 (243)
T COG1647 181 YSPTLVVQGRQDEMVPAESANFIYDHVESD-----------------------DKELKWLEGSGHVITLDKERDQVEEDV 237 (243)
T ss_pred ccchhheecccCCCCCHHHHHHHHHhccCC-----------------------cceeEEEccCCceeecchhHHHHHHHH
Confidence 579999999999999999999888875411 1123667889999999854 4567777
Q ss_pred HHHHc
Q 012876 441 TKFLS 445 (454)
Q Consensus 441 ~~fl~ 445 (454)
-+||.
T Consensus 238 ~~FL~ 242 (243)
T COG1647 238 ITFLE 242 (243)
T ss_pred HHHhh
Confidence 77875
No 152
>PLN02753 triacylglycerol lipase
Probab=50.12 E-value=28 Score=36.58 Aligned_cols=37 Identities=5% Similarity=0.017 Sum_probs=30.3
Q ss_pred ChHHhHHHHHHHHHHHHHHCCC--CCCCCeEEEcccccc
Q 012876 153 GDQVTANDSYAFLIGWFKRFPN--FKSHDFYIAGESYAD 189 (454)
Q Consensus 153 ~~~~~A~~~~~fL~~f~~~fp~--~~~~~~yI~GESYgG 189 (454)
+...+.+++...++.+.+++|. .....++|+|||.||
T Consensus 285 ~k~S~reQVl~eVkrLl~~Y~~e~~~~~sItVTGHSLGG 323 (531)
T PLN02753 285 AKFSAREQILTEVKRLVEEHGDDDDSDLSITVTGHSLGG 323 (531)
T ss_pred chhhHHHHHHHHHHHHHHHcccccCCCceEEEEccCHHH
Confidence 4456888999999999998874 234679999999999
No 153
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=49.76 E-value=25 Score=32.03 Aligned_cols=57 Identities=21% Similarity=0.242 Sum_probs=39.2
Q ss_pred CCeEEEEecCCCcccCchHHHHHHHHcCCCCccceeeceeCCeEeEEEEEeecCeEEEEEcCCccccccCChHHHHHHHH
Q 012876 362 GLRIWVYSGDTDGRVPVTSTRYSINKMGLKIKEEWRAWFHKHQVAGWVETYEKGLTLVTVRGAGHQVPAFAPAQSLSLFT 441 (454)
Q Consensus 362 ~~rVliy~Gd~D~i~~~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~Gy~~~~~~~Ltf~~V~gAGHmvP~dqP~~a~~~i~ 441 (454)
-.+++|.+|+.|-++...-. ++|.... .++.+++.+|.|+-...- ....+.+.
T Consensus 149 P~~~lvi~g~~Ddvv~l~~~------l~~~~~~--------------------~~~~i~i~~a~HFF~gKl-~~l~~~i~ 201 (210)
T COG2945 149 PSPGLVIQGDADDVVDLVAV------LKWQESI--------------------KITVITIPGADHFFHGKL-IELRDTIA 201 (210)
T ss_pred CCCceeEecChhhhhcHHHH------HHhhcCC--------------------CCceEEecCCCceecccH-HHHHHHHH
Confidence 47899999999966655544 4443332 688899999999985444 45555566
Q ss_pred HHHc
Q 012876 442 KFLS 445 (454)
Q Consensus 442 ~fl~ 445 (454)
.|+.
T Consensus 202 ~~l~ 205 (210)
T COG2945 202 DFLE 205 (210)
T ss_pred HHhh
Confidence 6663
No 154
>KOG3079 consensus Uridylate kinase/adenylate kinase [Nucleotide transport and metabolism]
Probab=49.61 E-value=9.8 Score=34.27 Aligned_cols=16 Identities=38% Similarity=0.897 Sum_probs=13.6
Q ss_pred CCCCeEEEeCCCCCch
Q 012876 79 SSKPLVLWLNGGPGCS 94 (454)
Q Consensus 79 ~~~PlilWlnGGPG~S 94 (454)
...|-|||.=|||||-
T Consensus 5 ~~~~~IifVlGGPGsg 20 (195)
T KOG3079|consen 5 LDKPPIIFVLGGPGSG 20 (195)
T ss_pred ccCCCEEEEEcCCCCC
Confidence 4678899999999994
No 155
>PF03283 PAE: Pectinacetylesterase
Probab=49.50 E-value=1.1e+02 Score=30.89 Aligned_cols=120 Identities=19% Similarity=0.172 Sum_probs=58.7
Q ss_pred CceeEEEEEEecCCCCCCCeEEEeCCCCCchhhchhh----hhhcCCeE-----EcCCC---CcccccCCCcccccceEE
Q 012876 64 HKALFYWFFEAQKGVSSKPLVLWLNGGPGCSSIAYGA----AQELGPFL-----VGGNG---SRLKFNKYSWNKAANMLF 131 (454)
Q Consensus 64 ~~~lfy~f~es~~~~~~~PlilWlnGGPG~SS~~~g~----f~E~GP~~-----~~~~~---~~l~~N~~sW~~~anvly 131 (454)
|+.-.|++-+. .....+-+||.|+||=-|.+.. -- ..+.|... +..+| ....+||.=+ ..|+||
T Consensus 34 GS~~~yy~~~g-~g~~s~~~li~leGGG~C~~~~-tC~~r~~t~~gss~~~~~~~~~~Gils~~~~~Np~f~--~wN~V~ 109 (361)
T PF03283_consen 34 GSPPGYYFRPG-SGSGSNKWLIFLEGGGWCWDAE-TCAQRSSTNLGSSKNWPKTFAFSGILSNDPAENPDFY--NWNHVF 109 (361)
T ss_pred CCCCcEEEccC-CCCCCceEEEEeccchhcCChh-HHhhhccCccccccchhhhccccccccCCcccCCccc--cccEEE
Confidence 34445555443 2346789999999998887642 22 22334222 12222 1234676222 256777
Q ss_pred EeCCCccCCCCcCCCCCCcccChHH-hHHHHHHHHHHHHHH-CCCCCCCCeEEEcccccc
Q 012876 132 LEAPVGVGFSYTNNSEDLHKLGDQV-TANDSYAFLIGWFKR-FPNFKSHDFYIAGESYAD 189 (454)
Q Consensus 132 IDqPvGtGfSy~~~~~~~~~~~~~~-~A~~~~~fL~~f~~~-fp~~~~~~~yI~GESYgG 189 (454)
|===.|.-|+=..+...+....-.- -...+..+|..+... +++ ..++.|+|.|-||
T Consensus 110 vpYC~Gd~~~G~~~~~~~~~~~l~frG~~i~~avl~~l~~~gl~~--a~~vlltG~SAGG 167 (361)
T PF03283_consen 110 VPYCDGDSHSGDVEPVDYGGTTLYFRGYRILRAVLDDLLSNGLPN--AKQVLLTGCSAGG 167 (361)
T ss_pred EEecCCccccCcccccccCCceeEeecHHHHHHHHHHHHHhcCcc--cceEEEeccChHH
Confidence 7433344343211111111000111 233333444444444 443 3469999999999
No 156
>PRK11190 Fe/S biogenesis protein NfuA; Provisional
Probab=49.34 E-value=13 Score=33.83 Aligned_cols=64 Identities=13% Similarity=0.205 Sum_probs=41.1
Q ss_pred eEEEeCCCCCchhhchhhhh--hc----CCeEEcCCCCcccccCCC--cccccceEEEeCCCccCCCCcCCCC
Q 012876 83 LVLWLNGGPGCSSIAYGAAQ--EL----GPFLVGGNGSRLKFNKYS--WNKAANMLFLEAPVGVGFSYTNNSE 147 (454)
Q Consensus 83 lilWlnGGPG~SS~~~g~f~--E~----GP~~~~~~~~~l~~N~~s--W~~~anvlyIDqPvGtGfSy~~~~~ 147 (454)
|=|-+. |.|||++.|++=. +. +-..+..++-++.-.+-| +.+-+-|=|+|...|.||.+.+++.
T Consensus 25 LRI~V~-~gGCsG~~Y~~~~~~~~~~~~~D~v~e~~gv~v~Vd~~S~~~L~G~~IDyve~~~g~gF~f~NPNa 96 (192)
T PRK11190 25 IRVFVI-NPGTPNAECGVSYCPPDAVEATDTELKFDGFSAYVDELSAPFLEDAEIDFVTDQLGSQLTLKAPNA 96 (192)
T ss_pred EEEEEE-CCCcCCceeeeEEeecCCCCCCCEEEEeCCEEEEECcchHhHhCCCEEEEeecCCCCceEEECCCC
Confidence 444445 4599976555433 11 224444455556655554 7777889999999999999966543
No 157
>PF09292 Neil1-DNA_bind: Endonuclease VIII-like 1, DNA bind; InterPro: IPR015371 This domain is predominantly found in Endonuclease VIII-like 1 proteins and adopts a glucocorticoid receptor-like fold. Structural analysis reveals a zincless finger motif that is required for glycosylase activity []. ; PDB: 1TDH_A.
Probab=48.83 E-value=10 Score=24.31 Aligned_cols=12 Identities=33% Similarity=1.043 Sum_probs=6.4
Q ss_pred CCeEEEeCCCCC
Q 012876 81 KPLVLWLNGGPG 92 (454)
Q Consensus 81 ~PlilWlnGGPG 92 (454)
.-=+|||+|-||
T Consensus 24 ~gRTiWFqGdPG 35 (39)
T PF09292_consen 24 NGRTIWFQGDPG 35 (39)
T ss_dssp TS-EEEESS---
T ss_pred CCCEEEeeCCCC
Confidence 344799999988
No 158
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=47.35 E-value=1.1e+02 Score=23.25 Aligned_cols=78 Identities=19% Similarity=0.177 Sum_probs=48.3
Q ss_pred ceeEEEEEEecCCCCCCCeEEEeCCCCCchhhchhhhhhcCCeEEcCCCCcccccCCCcccccceEEEeCCCccCCCCcC
Q 012876 65 KALFYWFFEAQKGVSSKPLVLWLNGGPGCSSIAYGAAQELGPFLVGGNGSRLKFNKYSWNKAANMLFLEAPVGVGFSYTN 144 (454)
Q Consensus 65 ~~lfy~f~es~~~~~~~PlilWlnGGPG~SS~~~g~f~E~GP~~~~~~~~~l~~N~~sW~~~anvlyIDqPvGtGfSy~~ 144 (454)
.+||+..++.++. .+.+|+.+.|--..|.- |..|.+ .|..+- ..|+-+|+ .|.|.|-..
T Consensus 2 ~~L~~~~w~p~~~--~k~~v~i~HG~~eh~~r-y~~~a~-----------~L~~~G------~~V~~~D~-rGhG~S~g~ 60 (79)
T PF12146_consen 2 TKLFYRRWKPENP--PKAVVVIVHGFGEHSGR-YAHLAE-----------FLAEQG------YAVFAYDH-RGHGRSEGK 60 (79)
T ss_pred cEEEEEEecCCCC--CCEEEEEeCCcHHHHHH-HHHHHH-----------HHHhCC------CEEEEECC-CcCCCCCCc
Confidence 4578877765432 68999999977444444 444432 222222 46888996 499999754
Q ss_pred CCCCCcccChHHhHHHHHHHHH
Q 012876 145 NSEDLHKLGDQVTANDSYAFLI 166 (454)
Q Consensus 145 ~~~~~~~~~~~~~A~~~~~fL~ 166 (454)
.. +.. +-++..+|+..|++
T Consensus 61 rg--~~~-~~~~~v~D~~~~~~ 79 (79)
T PF12146_consen 61 RG--HID-SFDDYVDDLHQFIQ 79 (79)
T ss_pred cc--ccC-CHHHHHHHHHHHhC
Confidence 33 222 56677777776653
No 159
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=46.71 E-value=37 Score=33.71 Aligned_cols=71 Identities=6% Similarity=-0.142 Sum_probs=42.6
Q ss_pred cceEEEeCCCccCCCCcCCCCCCcccChHH-hHHHHHHHHHHHHHHCCCCCCCCeEEEcccccc---------cccCcce
Q 012876 127 ANMLFLEAPVGVGFSYTNNSEDLHKLGDQV-TANDSYAFLIGWFKRFPNFKSHDFYIAGESYAD---------SFINLKG 196 (454)
Q Consensus 127 anvlyIDqPvGtGfSy~~~~~~~~~~~~~~-~A~~~~~fL~~f~~~fp~~~~~~~yI~GESYgG---------~~inLkG 196 (454)
.+++-+|- .|-|.|.. . + +.++ +..++..++....+..+ ..++++.|+|+|| .+-.+++
T Consensus 95 ~~V~~~D~-~g~g~s~~--~--~---~~~d~~~~~~~~~v~~l~~~~~---~~~i~lvGhS~GG~i~~~~~~~~~~~v~~ 163 (350)
T TIGR01836 95 QDVYLIDW-GYPDRADR--Y--L---TLDDYINGYIDKCVDYICRTSK---LDQISLLGICQGGTFSLCYAALYPDKIKN 163 (350)
T ss_pred CeEEEEeC-CCCCHHHh--c--C---CHHHHHHHHHHHHHHHHHHHhC---CCcccEEEECHHHHHHHHHHHhCchheee
Confidence 46777784 35454421 1 1 2222 33345555555555443 4589999999999 2335889
Q ss_pred eeeecccccCCC
Q 012876 197 FMIGNAVINDPT 208 (454)
Q Consensus 197 i~iGng~~~p~~ 208 (454)
+++.++.++...
T Consensus 164 lv~~~~p~~~~~ 175 (350)
T TIGR01836 164 LVTMVTPVDFET 175 (350)
T ss_pred EEEeccccccCC
Confidence 998888877543
No 160
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=46.03 E-value=4.9 Score=39.99 Aligned_cols=93 Identities=17% Similarity=0.220 Sum_probs=50.7
Q ss_pred CCCCCeEEEeCCCCCchhhchhhhhhcCCeEEcCCCCcccccCCCcc-cccceEEEeCCCccCCCCcCCCCCCcccChHH
Q 012876 78 VSSKPLVLWLNGGPGCSSIAYGAAQELGPFLVGGNGSRLKFNKYSWN-KAANMLFLEAPVGVGFSYTNNSEDLHKLGDQV 156 (454)
Q Consensus 78 ~~~~PlilWlnGGPG~SS~~~g~f~E~GP~~~~~~~~~l~~N~~sW~-~~anvlyIDqPvGtGfSy~~~~~~~~~~~~~~ 156 (454)
..++|++|.+.|=-+..+.. .-+. .+..+-+... ...|||.||--.++.-.|... . .+...
T Consensus 68 n~~~pt~iiiHGw~~~~~~~-~~~~------------~~~~all~~~~~d~NVI~VDWs~~a~~~Y~~a----~-~n~~~ 129 (331)
T PF00151_consen 68 NPSKPTVIIIHGWTGSGSSE-SWIQ------------DMIKALLQKDTGDYNVIVVDWSRGASNNYPQA----V-ANTRL 129 (331)
T ss_dssp -TTSEEEEEE--TT-TT-TT-THHH------------HHHHHHHCC--S-EEEEEEE-HHHHSS-HHHH----H-HHHHH
T ss_pred CCCCCeEEEEcCcCCcccch-hHHH------------HHHHHHHhhccCCceEEEEcchhhccccccch----h-hhHHH
Confidence 46789999998744433110 0011 1222222221 468999999765554433221 1 15667
Q ss_pred hHHHHHHHHHHHHHHCCCCCCCCeEEEcccccc
Q 012876 157 TANDSYAFLIGWFKRFPNFKSHDFYIAGESYAD 189 (454)
Q Consensus 157 ~A~~~~~fL~~f~~~fp~~~~~~~yI~GESYgG 189 (454)
+++.+.+||+.+.... .+...+++|.|+|.|+
T Consensus 130 vg~~la~~l~~L~~~~-g~~~~~ihlIGhSLGA 161 (331)
T PF00151_consen 130 VGRQLAKFLSFLINNF-GVPPENIHLIGHSLGA 161 (331)
T ss_dssp HHHHHHHHHHHHHHHH----GGGEEEEEETCHH
T ss_pred HHHHHHHHHHHHHhhc-CCChhHEEEEeeccch
Confidence 8888888888877543 3345689999999999
No 161
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=45.55 E-value=42 Score=32.81 Aligned_cols=59 Identities=8% Similarity=0.012 Sum_probs=37.9
Q ss_pred ChHHhHHHHHHHHHHHHHHCCC-CCCCCeEEEcccccc----------c----ccCcceeeeecccccCCCccc
Q 012876 153 GDQVTANDSYAFLIGWFKRFPN-FKSHDFYIAGESYAD----------S----FINLKGFMIGNAVINDPTDTK 211 (454)
Q Consensus 153 ~~~~~A~~~~~fL~~f~~~fp~-~~~~~~yI~GESYgG----------~----~inLkGi~iGng~~~p~~~~~ 211 (454)
+.++.++++-.+++-+-..... ....++.|.|||=|. . ...++|+|+-.|+-|......
T Consensus 82 SL~~D~~eI~~~v~ylr~~~~g~~~~~kIVLmGHSTGcQdvl~Yl~~~~~~~~~~~VdG~ILQApVSDREa~~~ 155 (303)
T PF08538_consen 82 SLDRDVEEIAQLVEYLRSEKGGHFGREKIVLMGHSTGCQDVLHYLSSPNPSPSRPPVDGAILQAPVSDREAILN 155 (303)
T ss_dssp -HHHHHHHHHHHHHHHHHHS------S-EEEEEECCHHHHHHHHHHH-TT---CCCEEEEEEEEE---TTSTTT
T ss_pred hhhhHHHHHHHHHHHHHHhhccccCCccEEEEecCCCcHHHHHHHhccCccccccceEEEEEeCCCCChhHhhh
Confidence 6777788888877665555322 456689999999999 1 367999999999988776433
No 162
>PLN02719 triacylglycerol lipase
Probab=45.10 E-value=23 Score=37.05 Aligned_cols=36 Identities=8% Similarity=0.121 Sum_probs=29.6
Q ss_pred hHHhHHHHHHHHHHHHHHCCCC--CCCCeEEEcccccc
Q 012876 154 DQVTANDSYAFLIGWFKRFPNF--KSHDFYIAGESYAD 189 (454)
Q Consensus 154 ~~~~A~~~~~fL~~f~~~fp~~--~~~~~yI~GESYgG 189 (454)
...+.+++...|+...+++|.. ....+.|+|||.||
T Consensus 272 k~SaReQVl~eV~rL~~~Ypd~~ge~~sItVTGHSLGG 309 (518)
T PLN02719 272 KFSAREQVLTEVKRLVERYGDEEGEELSITVTGHSLGG 309 (518)
T ss_pred chhHHHHHHHHHHHHHHHCCcccCCcceEEEecCcHHH
Confidence 3457788999999999999865 33569999999999
No 163
>PLN02310 triacylglycerol lipase
Probab=45.03 E-value=33 Score=35.02 Aligned_cols=35 Identities=6% Similarity=0.042 Sum_probs=26.0
Q ss_pred HHhHHHHHHHHHHHHHHCCC-CCCCCeEEEcccccc
Q 012876 155 QVTANDSYAFLIGWFKRFPN-FKSHDFYIAGESYAD 189 (454)
Q Consensus 155 ~~~A~~~~~fL~~f~~~fp~-~~~~~~yI~GESYgG 189 (454)
..+.+++...++...+.+++ -....+.|+|||.||
T Consensus 185 ~sa~~qVl~eV~~L~~~y~~~~e~~sI~vTGHSLGG 220 (405)
T PLN02310 185 LSASEQVMQEVKRLVNFYRGKGEEVSLTVTGHSLGG 220 (405)
T ss_pred chHHHHHHHHHHHHHHhhcccCCcceEEEEcccHHH
Confidence 34667777788888877753 223479999999999
No 164
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=44.93 E-value=51 Score=29.59 Aligned_cols=56 Identities=25% Similarity=0.285 Sum_probs=35.7
Q ss_pred cccceEEE--eCCCccCCCCcCCCCCCcccChHHhHHHHHHHHHHHHHHC-CCCCCCCeEEEcccccc
Q 012876 125 KAANMLFL--EAPVGVGFSYTNNSEDLHKLGDQVTANDSYAFLIGWFKRF-PNFKSHDFYIAGESYAD 189 (454)
Q Consensus 125 ~~anvlyI--DqPvGtGfSy~~~~~~~~~~~~~~~A~~~~~fL~~f~~~f-p~~~~~~~yI~GESYgG 189 (454)
+.|-|.|+ |.|.+...+-. ... --+..|.+|..|+..+-..+ | .-.+-+.|||||.
T Consensus 62 ~vAvV~WlgYdaP~~~~~~a~--~~~----~A~~ga~~L~~f~~gl~a~~~~---~~~~tv~GHSYGS 120 (177)
T PF06259_consen 62 SVAVVAWLGYDAPAGGLPDAA--SPG----YARAGAPRLARFLDGLRATHGP---DAHLTVVGHSYGS 120 (177)
T ss_pred CeEEEEEcCCCCCCCcccccc--Cch----HHHHHHHHHHHHHHHhhhhcCC---CCCEEEEEecchh
Confidence 67788887 44522332211 111 23457888888888877666 3 3368899999998
No 165
>PLN02408 phospholipase A1
Probab=44.91 E-value=24 Score=35.52 Aligned_cols=33 Identities=9% Similarity=0.075 Sum_probs=27.1
Q ss_pred HhHHHHHHHHHHHHHHCCCCCCCCeEEEcccccc
Q 012876 156 VTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAD 189 (454)
Q Consensus 156 ~~A~~~~~fL~~f~~~fp~~~~~~~yI~GESYgG 189 (454)
.+.+++.+.|+.+.+.+|.. ...++|+|||.||
T Consensus 179 s~r~qVl~eI~~ll~~y~~~-~~sI~vTGHSLGG 211 (365)
T PLN02408 179 SLQEMVREEIARLLQSYGDE-PLSLTITGHSLGA 211 (365)
T ss_pred hHHHHHHHHHHHHHHhcCCC-CceEEEeccchHH
Confidence 56778888899999988864 2369999999999
No 166
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=43.87 E-value=2.7e+02 Score=26.70 Aligned_cols=49 Identities=12% Similarity=0.064 Sum_probs=28.1
Q ss_pred hHHHHHHHHHH----HHHH-CCCCCCCCeEEEcccccc---------cccCcceeeeecccccC
Q 012876 157 TANDSYAFLIG----WFKR-FPNFKSHDFYIAGESYAD---------SFINLKGFMIGNAVIND 206 (454)
Q Consensus 157 ~A~~~~~fL~~----f~~~-fp~~~~~~~yI~GESYgG---------~~inLkGi~iGng~~~p 206 (454)
.|..+.+||.+ |.+. + +....+--|+|+|||| .+--+.-+.+.+|.+..
T Consensus 112 g~~~f~~fL~~~lkP~Ie~~y-~~~~~~~~i~GhSlGGLfvl~aLL~~p~~F~~y~~~SPSlWw 174 (264)
T COG2819 112 GGDAFREFLTEQLKPFIEARY-RTNSERTAIIGHSLGGLFVLFALLTYPDCFGRYGLISPSLWW 174 (264)
T ss_pred ChHHHHHHHHHhhHHHHhccc-ccCcccceeeeecchhHHHHHHHhcCcchhceeeeecchhhh
Confidence 34455555544 4443 3 2334458999999999 12335556666665443
No 167
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=43.83 E-value=52 Score=31.06 Aligned_cols=59 Identities=19% Similarity=0.194 Sum_probs=46.0
Q ss_pred CCeEEEEecCCCcccCchHHHHHHHHcCCCCccceeeceeCCeEeEEEEEeecCeEEEEEcCCccccccCChHHHHHHHH
Q 012876 362 GLRIWVYSGDTDGRVPVTSTRYSINKMGLKIKEEWRAWFHKHQVAGWVETYEKGLTLVTVRGAGHQVPAFAPAQSLSLFT 441 (454)
Q Consensus 362 ~~rVliy~Gd~D~i~~~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~Gy~~~~~~~Ltf~~V~gAGHmvP~dqP~~a~~~i~ 441 (454)
..+|.++.|+.|.+|...-...|-+..+ + .+++- +...|||-+.+|.+..+..|.
T Consensus 176 ~~pi~~~~G~~D~~vs~~~~~~W~~~t~-----------------------~-~f~l~-~fdGgHFfl~~~~~~v~~~i~ 230 (244)
T COG3208 176 ACPIHAFGGEKDHEVSRDELGAWREHTK-----------------------G-DFTLR-VFDGGHFFLNQQREEVLARLE 230 (244)
T ss_pred CcceEEeccCcchhccHHHHHHHHHhhc-----------------------C-CceEE-EecCcceehhhhHHHHHHHHH
Confidence 6899999999999999987776755421 1 34444 555799999999999998888
Q ss_pred HHHc
Q 012876 442 KFLS 445 (454)
Q Consensus 442 ~fl~ 445 (454)
+.+.
T Consensus 231 ~~l~ 234 (244)
T COG3208 231 QHLA 234 (244)
T ss_pred HHhh
Confidence 8874
No 168
>PLN02324 triacylglycerol lipase
Probab=43.61 E-value=27 Score=35.70 Aligned_cols=36 Identities=11% Similarity=0.099 Sum_probs=28.7
Q ss_pred ChHHhHHHHHHHHHHHHHHCCCCCCCCeEEEcccccc
Q 012876 153 GDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAD 189 (454)
Q Consensus 153 ~~~~~A~~~~~fL~~f~~~fp~~~~~~~yI~GESYgG 189 (454)
+...+.+++...|+.+.+++|... ..+.|+|||.||
T Consensus 191 ~k~SareqVl~eV~~L~~~Yp~e~-~sItvTGHSLGG 226 (415)
T PLN02324 191 DTTSAQEQVQGELKRLLELYKNEE-ISITFTGHSLGA 226 (415)
T ss_pred chhHHHHHHHHHHHHHHHHCCCCC-ceEEEecCcHHH
Confidence 344678888888999999887532 369999999999
No 169
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=43.36 E-value=12 Score=37.86 Aligned_cols=32 Identities=16% Similarity=0.141 Sum_probs=21.0
Q ss_pred CCeEEEcccccc--------cccCcceeeeecccccCCCc
Q 012876 178 HDFYIAGESYAD--------SFINLKGFMIGNAVINDPTD 209 (454)
Q Consensus 178 ~~~yI~GESYgG--------~~inLkGi~iGng~~~p~~~ 209 (454)
.++-++|||||| ....++..++.+||+-|..+
T Consensus 228 ~~i~~~GHSFGGATa~~~l~~d~r~~~~I~LD~W~~Pl~~ 267 (379)
T PF03403_consen 228 SRIGLAGHSFGGATALQALRQDTRFKAGILLDPWMFPLGD 267 (379)
T ss_dssp EEEEEEEETHHHHHHHHHHHH-TT--EEEEES---TTS-G
T ss_pred hheeeeecCchHHHHHHHHhhccCcceEEEeCCcccCCCc
Confidence 358999999999 35678999999999988653
No 170
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=43.25 E-value=49 Score=36.97 Aligned_cols=64 Identities=16% Similarity=0.058 Sum_probs=42.4
Q ss_pred CCeEEEEecCCCcccCchHHHHHHHHcCCCCccceeeceeCCeEeEEEEEeecCeEEEEEcCCccccccC-ChH----HH
Q 012876 362 GLRIWVYSGDTDGRVPVTSTRYSINKMGLKIKEEWRAWFHKHQVAGWVETYEKGLTLVTVRGAGHQVPAF-APA----QS 436 (454)
Q Consensus 362 ~~rVliy~Gd~D~i~~~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~Gy~~~~~~~Ltf~~V~gAGHmvP~d-qP~----~a 436 (454)
+++||+.+|..|..++..++..+.+.|+-.+.. ..+++...||--+.. ++. ..
T Consensus 455 kvPvLlIhGw~D~~V~~~~s~~ly~aL~~~g~p----------------------kkL~l~~g~H~~~~~~~~~d~~e~~ 512 (767)
T PRK05371 455 KASVLVVHGLNDWNVKPKQVYQWWDALPENGVP----------------------KKLFLHQGGHVYPNNWQSIDFRDTM 512 (767)
T ss_pred CCCEEEEeeCCCCCCChHHHHHHHHHHHhcCCC----------------------eEEEEeCCCccCCCchhHHHHHHHH
Confidence 799999999999999999888877776532221 113456778865443 333 34
Q ss_pred HHHHHHHHcCC
Q 012876 437 LSLFTKFLSAA 447 (454)
Q Consensus 437 ~~~i~~fl~~~ 447 (454)
++.|.+||.|.
T Consensus 513 ~~Wfd~~LkG~ 523 (767)
T PRK05371 513 NAWFTHKLLGI 523 (767)
T ss_pred HHHHHhccccC
Confidence 55566666654
No 171
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=42.96 E-value=55 Score=30.41 Aligned_cols=28 Identities=14% Similarity=0.050 Sum_probs=24.6
Q ss_pred eEEEcccccc---------cccCcceeeeecccccCC
Q 012876 180 FYIAGESYAD---------SFINLKGFMIGNAVINDP 207 (454)
Q Consensus 180 ~yI~GESYgG---------~~inLkGi~iGng~~~p~ 207 (454)
..|+|.|.|| .+--+.+++..+|.+++.
T Consensus 117 ~~i~G~S~GG~~Al~~~l~~Pd~F~~~~~~S~~~~~~ 153 (251)
T PF00756_consen 117 RAIAGHSMGGYGALYLALRHPDLFGAVIAFSGALDPS 153 (251)
T ss_dssp EEEEEETHHHHHHHHHHHHSTTTESEEEEESEESETT
T ss_pred eEEeccCCCcHHHHHHHHhCccccccccccCcccccc
Confidence 8999999999 455689999999998887
No 172
>COG0627 Predicted esterase [General function prediction only]
Probab=42.89 E-value=56 Score=32.28 Aligned_cols=121 Identities=18% Similarity=0.168 Sum_probs=60.5
Q ss_pred CCCeEEEeCCCCCchhhchhhhhhcCCeEEcCCCCc--cccc-CCCcccccceEEEeCCCccCCCCcCCCCCCcccChHH
Q 012876 80 SKPLVLWLNGGPGCSSIAYGAAQELGPFLVGGNGSR--LKFN-KYSWNKAANMLFLEAPVGVGFSYTNNSEDLHKLGDQV 156 (454)
Q Consensus 80 ~~PlilWlnGGPG~SS~~~g~f~E~GP~~~~~~~~~--l~~N-~~sW~~~anvlyIDqPvGtGfSy~~~~~~~~~~~~~~ 156 (454)
++--|+|+.+|..|..- .+.+.++++=..+... ++-+ ---+....++.-|+ |+|.|.|+-.+-..-.. ...
T Consensus 52 ~~ipV~~~l~G~t~~~~---~~~~~~g~~~~a~~~g~~~~~p~t~~~~~~~~~~vv~-p~G~~~sfY~d~~~~~~-~~~- 125 (316)
T COG0627 52 RDIPVLYLLSGLTCNEP---NVYLLDGLRRQADESGWAVVTPDTSPRGAGVNISVVM-PLGGGASFYSDWTQPPW-ASG- 125 (316)
T ss_pred CCCCEEEEeCCCCCCCC---ceEeccchhhhhhhcCeEEecCCCCcccCCCCccccc-cCCCccceecccccCcc-ccC-
Confidence 44456666678888731 1223333322222111 1111 12244445555566 79999998654322100 111
Q ss_pred hHHHHHHHHH-----HHHHHCCCCCC-CCeEEEcccccc---------cccCcceeeeecccccCC
Q 012876 157 TANDSYAFLI-----GWFKRFPNFKS-HDFYIAGESYAD---------SFINLKGFMIGNAVINDP 207 (454)
Q Consensus 157 ~A~~~~~fL~-----~f~~~fp~~~~-~~~yI~GESYgG---------~~inLkGi~iGng~~~p~ 207 (454)
.-+.+.||. .|.+.||.-++ ..-.|+|+|.|| .+-.++.++=-.|+++|.
T Consensus 126 -~~q~~tfl~~ELP~~~~~~f~~~~~~~~~aI~G~SMGG~GAl~lA~~~pd~f~~~sS~Sg~~~~s 190 (316)
T COG0627 126 -PYQWETFLTQELPALWEAAFPADGTGDGRAIAGHSMGGYGALKLALKHPDRFKSASSFSGILSPS 190 (316)
T ss_pred -ccchhHHHHhhhhHHHHHhcCcccccCCceeEEEeccchhhhhhhhhCcchhceecccccccccc
Confidence 123333332 45556664332 246899999999 123456666666666665
No 173
>PRK14567 triosephosphate isomerase; Provisional
Probab=42.78 E-value=52 Score=31.33 Aligned_cols=51 Identities=16% Similarity=0.303 Sum_probs=34.2
Q ss_pred HHhHHHHHHHHHHHHHHCCCCCCCCeEEEcccccc-----------cccCcceeeeecccccCCC
Q 012876 155 QVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAD-----------SFINLKGFMIGNAVINDPT 208 (454)
Q Consensus 155 ~~~A~~~~~fL~~f~~~fp~~~~~~~yI~GESYgG-----------~~inLkGi~iGng~~~p~~ 208 (454)
.+.+++...++++++.++-+-....+=|. ||| ..-++.|+.||.+.+++..
T Consensus 178 ~e~i~~~~~~IR~~l~~~~~~~a~~v~Il---YGGSV~~~N~~~l~~~~diDG~LVGgasL~~~~ 239 (253)
T PRK14567 178 LEQIQETHQFIRSLLAKVDERLAKNIKIV---YGGSLKAENAKDILSLPDVDGGLIGGASLKAAE 239 (253)
T ss_pred HHHHHHHHHHHHHHHHhhcccccccceEE---EcCcCCHHHHHHHHcCCCCCEEEeehhhhcHHH
Confidence 45688888999999876421111222232 888 3456999999999987654
No 174
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=41.64 E-value=65 Score=30.11 Aligned_cols=71 Identities=14% Similarity=0.018 Sum_probs=47.0
Q ss_pred ceEEEeCCCccCCCCcCCCCCCcccChHHhHHHHHHHHHHHHHHCCCCCCCCeEEEcccccc----------------cc
Q 012876 128 NMLFLEAPVGVGFSYTNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAD----------------SF 191 (454)
Q Consensus 128 nvlyIDqPvGtGfSy~~~~~~~~~~~~~~~A~~~~~fL~~f~~~fp~~~~~~~yI~GESYgG----------------~~ 191 (454)
+...|+-|.+.+-=..-....+.. +..+.++.+..+|..+.. ..+++.|+|.|-|+ ..
T Consensus 4 ~~~~V~YPa~f~P~~g~~~~t~~~-Sv~~G~~~L~~ai~~~~~-----~~~~vvV~GySQGA~Va~~~~~~l~~~~~~~~ 77 (225)
T PF08237_consen 4 NVVAVDYPASFWPVTGIGSPTYDE-SVAEGVANLDAAIRAAIA-----AGGPVVVFGYSQGAVVASNVLRRLAADGDPPP 77 (225)
T ss_pred ceEEecCCchhcCcCCCCCCccch-HHHHHHHHHHHHHHhhcc-----CCCCEEEEEECHHHHHHHHHHHHHHhcCCCCc
Confidence 445566666443311111122333 677788888888887665 56789999999999 12
Q ss_pred cCcceeeeecccc
Q 012876 192 INLKGFMIGNAVI 204 (454)
Q Consensus 192 inLkGi~iGng~~ 204 (454)
-+++-+++|||.-
T Consensus 78 ~~l~fVl~gnP~r 90 (225)
T PF08237_consen 78 DDLSFVLIGNPRR 90 (225)
T ss_pred CceEEEEecCCCC
Confidence 4689999999863
No 175
>PRK14566 triosephosphate isomerase; Provisional
Probab=41.49 E-value=56 Score=31.28 Aligned_cols=50 Identities=22% Similarity=0.349 Sum_probs=34.2
Q ss_pred HHhHHHHHHHHHHHHHHCCCCCCCCeEEEcccccc-----------cccCcceeeeecccccCC
Q 012876 155 QVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAD-----------SFINLKGFMIGNAVINDP 207 (454)
Q Consensus 155 ~~~A~~~~~fL~~f~~~fp~~~~~~~yI~GESYgG-----------~~inLkGi~iGng~~~p~ 207 (454)
.+.|+++..||++++...-......+=|. ||| ...++.|++||...+++.
T Consensus 188 ~e~a~~v~~~IR~~l~~~~~~~a~~~rIl---YGGSV~~~N~~~l~~~~dIDG~LVGgASL~~~ 248 (260)
T PRK14566 188 PEQAQEVHAFIRKRLSEVSPFIGENIRIL---YGGSVTPSNAADLFAQPDVDGGLIGGASLNST 248 (260)
T ss_pred HHHHHHHHHHHHHHHHhcCccccccceEE---ecCCCCHhHHHHHhcCCCCCeEEechHhcCHH
Confidence 34688899999999875311111122233 999 356799999999988874
No 176
>PLN02802 triacylglycerol lipase
Probab=41.03 E-value=40 Score=35.30 Aligned_cols=33 Identities=6% Similarity=0.102 Sum_probs=26.2
Q ss_pred HhHHHHHHHHHHHHHHCCCCCCCCeEEEcccccc
Q 012876 156 VTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAD 189 (454)
Q Consensus 156 ~~A~~~~~fL~~f~~~fp~~~~~~~yI~GESYgG 189 (454)
.+.+++..-++.+++++|.. ...++|+|||.||
T Consensus 309 S~reqVl~eV~~Ll~~Y~~e-~~sI~VTGHSLGG 341 (509)
T PLN02802 309 SLSESVVGEVRRLMEKYKGE-ELSITVTGHSLGA 341 (509)
T ss_pred hHHHHHHHHHHHHHHhCCCC-cceEEEeccchHH
Confidence 46678888888888887643 2368999999999
No 177
>PF07172 GRP: Glycine rich protein family; InterPro: IPR010800 This family consists of glycine rich proteins. Some of them may be involved in resistance to environmental stress [].
Probab=40.95 E-value=24 Score=28.21 Aligned_cols=8 Identities=38% Similarity=0.318 Sum_probs=4.2
Q ss_pred CCCCchhH
Q 012876 1 MGSTSNCL 8 (454)
Q Consensus 1 ~~~~~~~~ 8 (454)
|+|..-.|
T Consensus 1 MaSK~~ll 8 (95)
T PF07172_consen 1 MASKAFLL 8 (95)
T ss_pred CchhHHHH
Confidence 66555333
No 178
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=40.91 E-value=34 Score=31.93 Aligned_cols=35 Identities=11% Similarity=0.024 Sum_probs=24.5
Q ss_pred HHhHHHHHHHHHHHHHHC--CCCCCCCeEEEcccccc
Q 012876 155 QVTANDSYAFLIGWFKRF--PNFKSHDFYIAGESYAD 189 (454)
Q Consensus 155 ~~~A~~~~~fL~~f~~~f--p~~~~~~~yI~GESYgG 189 (454)
...++.+.+.++...+.+ ..-..+++.|.|||.||
T Consensus 60 ~~q~~~~~~~i~~i~~~~~~~~~~~~~vilVgHSmGG 96 (225)
T PF07819_consen 60 QRQAEFLAEAIKYILELYKSNRPPPRSVILVGHSMGG 96 (225)
T ss_pred HHHHHHHHHHHHHHHHhhhhccCCCCceEEEEEchhh
Confidence 345666666666666654 23356789999999999
No 179
>PF00681 Plectin: Plectin repeat; InterPro: IPR001101 Plectin may have a role in cross-linking intermediate filaments, in inter-linking intermediate filaments with microtubules and microfilaments and in anchoring intermediate filaments to the plasma and nuclear membranes. Plectin is recruited into hemidesmosomes, multiprotein complexes that facilitate adhesion of epithelia to the basement membrane, thereby providing linkage between the intracellular keratin filaments to the laminins of the extracellular matrix. Plectin binds to hemidesmosomes through association of its actin-binding domain with the first pair of fibronectin type III repeats and a small part of the connecting segment of the integrin-beta4 subunit, the latter (integrin-alpha6,beta4) acting as a receptor for the extracellular matrix component laminin-5. The plectin repeat is also seen in the cell adhesion junction plaque proteins, desmoplakin, envoplakin, and bullous pemphigoid antigen. The domains in plakins show considerable sequence homology. The N terminus consists of a plakin domain containing a number of subdomains with high alpha-helical content, while the central coiled-coil domain is composed of heptad repeats involved in the dimerisation of plakin, and the C terminus contains one or more homologous repeat sequences referred to plectin repeats []. This entry represents the plectin repeats found in the C terminus of plakin proteins.; GO: 0005856 cytoskeleton; PDB: 1LM7_A 1LM5_A.
Probab=40.59 E-value=33 Score=23.07 Aligned_cols=33 Identities=15% Similarity=0.221 Sum_probs=25.2
Q ss_pred cccccCCCccchhHHHhhhcccCCHHHHHHHHH
Q 012876 201 NAVINDPTDTKGLVDYAWSHAIISDKLYKDISK 233 (454)
Q Consensus 201 ng~~~p~~~~~s~~~f~~~~gli~~~~~~~l~~ 233 (454)
.|.+||.....--.+=|+..|+||++....+.+
T Consensus 11 gGiidp~tg~~lsv~~A~~~glId~~~~~~L~e 43 (45)
T PF00681_consen 11 GGIIDPETGERLSVEEAIQRGLIDSDTAQKLLE 43 (45)
T ss_dssp TSEEETTTTEEEEHHHHHHTTSS-HHHHHHHHH
T ss_pred eeEEeCCCCeEEcHHHHHHCCCcCHHHHHHHHc
Confidence 478899886665567789999999999887754
No 180
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=39.34 E-value=28 Score=32.40 Aligned_cols=38 Identities=13% Similarity=0.090 Sum_probs=26.8
Q ss_pred HHHHHCCCCCCCCeEEEcccccc---------cccCcceeeeecccc
Q 012876 167 GWFKRFPNFKSHDFYIAGESYAD---------SFINLKGFMIGNAVI 204 (454)
Q Consensus 167 ~f~~~fp~~~~~~~yI~GESYgG---------~~inLkGi~iGng~~ 204 (454)
+.+......-.+++|++|.|-|| .+--+.++++..|..
T Consensus 86 ~~v~~~~~iD~~RVyv~G~S~Gg~ma~~la~~~pd~faa~a~~sG~~ 132 (220)
T PF10503_consen 86 DYVAARYNIDPSRVYVTGLSNGGMMANVLACAYPDLFAAVAVVSGVP 132 (220)
T ss_pred HhHhhhcccCCCceeeEEECHHHHHHHHHHHhCCccceEEEeecccc
Confidence 33333346677799999999999 344577888777763
No 181
>TIGR01911 HesB_rel_seleno HesB-like selenoprotein. This model represents a family of small proteins related to HesB and its close homologs, which are likely to be invovlved in iron-sulfur cluster assembly (See TIGR00049 and pfam01521). Several members are selenoproteins, with a TGA codon and Sec residue that aligns to the conserved Cys of the HesB domain. A variable Cys/Ser/Gly-rich C-terminal region is not included in the seed alignment and model.
Probab=39.10 E-value=31 Score=27.27 Aligned_cols=57 Identities=16% Similarity=0.216 Sum_probs=31.1
Q ss_pred eEEEeCCCCCchhhchhhhhhc---CCeEEcCCCCcccccCCC--cccccceEEEeCCCccCC
Q 012876 83 LVLWLNGGPGCSSIAYGAAQEL---GPFLVGGNGSRLKFNKYS--WNKAANMLFLEAPVGVGF 140 (454)
Q Consensus 83 lilWlnGGPG~SS~~~g~f~E~---GP~~~~~~~~~l~~N~~s--W~~~anvlyIDqPvGtGf 140 (454)
|=|-+.|| |||++.|++=.+. +-..+..++-++.-.|.| -.+-+-|=|++...|.||
T Consensus 28 LRi~v~~g-GCsG~~Y~~~ld~~~~~D~v~~~~gv~v~vD~~s~~~l~G~~iDy~~~~~g~gF 89 (92)
T TIGR01911 28 IRIHFAGM-GCMGPMFNLIADEEKEGDEIEKIHDLTFLIDKNLIDQFGGFSIECAEENFGAGF 89 (92)
T ss_pred EEEEEeCC-CccCcccceEecCCCCCCEEEEeCCEEEEECHHHHHHhCCCEEEEecCCCCCcE
Confidence 88889988 9999876554432 112222333333333333 233344556666666665
No 182
>PLN02934 triacylglycerol lipase
Probab=37.14 E-value=35 Score=35.73 Aligned_cols=28 Identities=21% Similarity=0.272 Sum_probs=23.2
Q ss_pred HHHHHHHHHHHHHCCCCCCCCeEEEcccccc
Q 012876 159 NDSYAFLIGWFKRFPNFKSHDFYIAGESYAD 189 (454)
Q Consensus 159 ~~~~~fL~~f~~~fp~~~~~~~yI~GESYgG 189 (454)
.++...|+++.+++|. .+++|+|||.||
T Consensus 305 ~~v~~~lk~ll~~~p~---~kIvVTGHSLGG 332 (515)
T PLN02934 305 YAVRSKLKSLLKEHKN---AKFVVTGHSLGG 332 (515)
T ss_pred HHHHHHHHHHHHHCCC---CeEEEeccccHH
Confidence 4567778888888885 479999999999
No 183
>PLN02162 triacylglycerol lipase
Probab=36.38 E-value=35 Score=35.42 Aligned_cols=28 Identities=18% Similarity=0.207 Sum_probs=21.6
Q ss_pred HHHHHHHHHHHHHCCCCCCCCeEEEcccccc
Q 012876 159 NDSYAFLIGWFKRFPNFKSHDFYIAGESYAD 189 (454)
Q Consensus 159 ~~~~~fL~~f~~~fp~~~~~~~yI~GESYgG 189 (454)
..+.+.|+.++.++|. .+++|+|||.||
T Consensus 262 ~~I~~~L~~lL~k~p~---~kliVTGHSLGG 289 (475)
T PLN02162 262 YTIRQMLRDKLARNKN---LKYILTGHSLGG 289 (475)
T ss_pred HHHHHHHHHHHHhCCC---ceEEEEecChHH
Confidence 3455667777777774 479999999999
No 184
>PLN00413 triacylglycerol lipase
Probab=36.37 E-value=30 Score=35.91 Aligned_cols=27 Identities=22% Similarity=0.385 Sum_probs=22.1
Q ss_pred HHHHHHHHHHHHCCCCCCCCeEEEcccccc
Q 012876 160 DSYAFLIGWFKRFPNFKSHDFYIAGESYAD 189 (454)
Q Consensus 160 ~~~~fL~~f~~~fp~~~~~~~yI~GESYgG 189 (454)
++...|++.+..+|. .+++|+|||.||
T Consensus 269 ~i~~~Lk~ll~~~p~---~kliVTGHSLGG 295 (479)
T PLN00413 269 TILRHLKEIFDQNPT---SKFILSGHSLGG 295 (479)
T ss_pred HHHHHHHHHHHHCCC---CeEEEEecCHHH
Confidence 566778888887874 479999999999
No 185
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=35.17 E-value=69 Score=31.73 Aligned_cols=108 Identities=20% Similarity=0.263 Sum_probs=63.2
Q ss_pred CceeEEEEEEecCCCCCCCeEEEeCCCCCchh------hchhhhhhcCCeEEcCCCCcccccCCCcccccceEEEeCCCc
Q 012876 64 HKALFYWFFEAQKGVSSKPLVLWLNGGPGCSS------IAYGAAQELGPFLVGGNGSRLKFNKYSWNKAANMLFLEAPVG 137 (454)
Q Consensus 64 ~~~lfy~f~es~~~~~~~PlilWlnGGPG~SS------~~~g~f~E~GP~~~~~~~~~l~~N~~sW~~~anvlyIDqPvG 137 (454)
+--.+.|.-. ......|+++-+.|==|.|. + ...+.+-| | .++-.+ --|
T Consensus 60 ~~~~ldw~~~--p~~~~~P~vVl~HGL~G~s~s~y~r~L-~~~~~~rg-~--------------------~~Vv~~-~Rg 114 (345)
T COG0429 60 GFIDLDWSED--PRAAKKPLVVLFHGLEGSSNSPYARGL-MRALSRRG-W--------------------LVVVFH-FRG 114 (345)
T ss_pred CEEEEeeccC--ccccCCceEEEEeccCCCCcCHHHHHH-HHHHHhcC-C--------------------eEEEEe-ccc
Confidence 3345666642 12345699999999766653 3 13334444 2 334444 457
Q ss_pred cCCCCcCCCCCCcccChHHhHHHHHHHHHHHHHHCCCCCCCCeEEEcccccc------------cccCcceeeeeccc
Q 012876 138 VGFSYTNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAD------------SFINLKGFMIGNAV 203 (454)
Q Consensus 138 tGfSy~~~~~~~~~~~~~~~A~~~~~fL~~f~~~fp~~~~~~~yI~GESYgG------------~~inLkGi~iGng~ 203 (454)
.|.+-...+.-|.. ... +|+..||......+| .+++|.+|-|.|| ......++++-+|+
T Consensus 115 cs~~~n~~p~~yh~-G~t---~D~~~~l~~l~~~~~---~r~~~avG~SLGgnmLa~ylgeeg~d~~~~aa~~vs~P~ 185 (345)
T COG0429 115 CSGEANTSPRLYHS-GET---EDIRFFLDWLKARFP---PRPLYAVGFSLGGNMLANYLGEEGDDLPLDAAVAVSAPF 185 (345)
T ss_pred ccCCcccCcceecc-cch---hHHHHHHHHHHHhCC---CCceEEEEecccHHHHHHHHHhhccCcccceeeeeeCHH
Confidence 77665444444432 332 566666655555566 6899999999999 12335666666665
No 186
>PLN02429 triosephosphate isomerase
Probab=34.16 E-value=77 Score=31.22 Aligned_cols=50 Identities=22% Similarity=0.467 Sum_probs=34.0
Q ss_pred HhHHHHHHHHHHHHHH-CCCCCCCCeEEEcccccc-----------cccCcceeeeecccccCCC
Q 012876 156 VTANDSYAFLIGWFKR-FPNFKSHDFYIAGESYAD-----------SFINLKGFMIGNAVINDPT 208 (454)
Q Consensus 156 ~~A~~~~~fL~~f~~~-fp~~~~~~~yI~GESYgG-----------~~inLkGi~iGng~~~p~~ 208 (454)
+.++.+.+++++|+.. +.+-....+-|. ||| ...+++|+.||.+.+++..
T Consensus 239 e~~~~v~~~IR~~l~~~~~~~va~~irIL---YGGSV~~~N~~el~~~~diDG~LVGgASL~~~~ 300 (315)
T PLN02429 239 QQAQEVHVAVRGWLKKNVSEEVASKTRII---YGGSVNGGNSAELAKEEDIDGFLVGGASLKGPE 300 (315)
T ss_pred HHHHHHHHHHHHHHHHHhhhhhccCceEE---EcCccCHHHHHHHhcCCCCCEEEeecceecHHH
Confidence 4678888889988864 332222233333 888 4578999999999986643
No 187
>PLN02761 lipase class 3 family protein
Probab=33.97 E-value=44 Score=35.13 Aligned_cols=37 Identities=8% Similarity=0.057 Sum_probs=28.8
Q ss_pred ChHHhHHHHHHHHHHHHHHCCCC-C--CCCeEEEcccccc
Q 012876 153 GDQVTANDSYAFLIGWFKRFPNF-K--SHDFYIAGESYAD 189 (454)
Q Consensus 153 ~~~~~A~~~~~fL~~f~~~fp~~-~--~~~~yI~GESYgG 189 (454)
+...+.+++...++...+.+|.. + ...++|+|||.||
T Consensus 266 ~k~SaR~qVl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGG 305 (527)
T PLN02761 266 SSFSAREQVLAEVKRLVEYYGTEEEGHEISITVTGHSLGA 305 (527)
T ss_pred cchhHHHHHHHHHHHHHHhcccccCCCCceEEEeccchHH
Confidence 34467888999999999888643 2 2359999999999
No 188
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=33.37 E-value=44 Score=29.71 Aligned_cols=41 Identities=7% Similarity=0.027 Sum_probs=27.5
Q ss_pred HHHHHHHHCCCCCCCCeEEEcccccc----------cccCcceeeeeccccc
Q 012876 164 FLIGWFKRFPNFKSHDFYIAGESYAD----------SFINLKGFMIGNAVIN 205 (454)
Q Consensus 164 fL~~f~~~fp~~~~~~~yI~GESYgG----------~~inLkGi~iGng~~~ 205 (454)
+++.+-+.-... ..+.+|.|||.|+ ...+++|+++..|+-.
T Consensus 42 W~~~l~~~i~~~-~~~~ilVaHSLGc~~~l~~l~~~~~~~v~g~lLVAp~~~ 92 (171)
T PF06821_consen 42 WVQALDQAIDAI-DEPTILVAHSLGCLTALRWLAEQSQKKVAGALLVAPFDP 92 (171)
T ss_dssp HHHHHHHCCHC--TTTEEEEEETHHHHHHHHHHHHTCCSSEEEEEEES--SC
T ss_pred HHHHHHHHHhhc-CCCeEEEEeCHHHHHHHHHHhhcccccccEEEEEcCCCc
Confidence 344443433333 4579999999999 4678999999999943
No 189
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=32.97 E-value=72 Score=29.40 Aligned_cols=93 Identities=18% Similarity=0.177 Sum_probs=56.4
Q ss_pred CceeEEEEEEecCCCCCCCeEEEeCCCCCchhhchhhhhhcCCeEEcCCCCcccccCCCcccccceEEEeCCCccCCCCc
Q 012876 64 HKALFYWFFEAQKGVSSKPLVLWLNGGPGCSSIAYGAAQELGPFLVGGNGSRLKFNKYSWNKAANMLFLEAPVGVGFSYT 143 (454)
Q Consensus 64 ~~~lfy~f~es~~~~~~~PlilWlnGGPG~SS~~~g~f~E~GP~~~~~~~~~l~~N~~sW~~~anvlyIDqPvGtGfSy~ 143 (454)
+.+|.|.-+- .-+--||-+-|-=||+-.+++.=.++ .++ -.-..||-+| |.|-|-|..
T Consensus 30 g~ql~y~~~G-----~G~~~iLlipGalGs~~tDf~pql~~-------------l~k---~l~~TivawD-PpGYG~SrP 87 (277)
T KOG2984|consen 30 GTQLGYCKYG-----HGPNYILLIPGALGSYKTDFPPQLLS-------------LFK---PLQVTIVAWD-PPGYGTSRP 87 (277)
T ss_pred CceeeeeecC-----CCCceeEecccccccccccCCHHHHh-------------cCC---CCceEEEEEC-CCCCCCCCC
Confidence 5667665432 23445788888888887763221111 111 0116789999 558887765
Q ss_pred CCCC---CCcccChHHhHHHHHHHHHHHHHHCCCCCCCCeEEEcccccc
Q 012876 144 NNSE---DLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAD 189 (454)
Q Consensus 144 ~~~~---~~~~~~~~~~A~~~~~fL~~f~~~fp~~~~~~~yI~GESYgG 189 (454)
.... ++-. .|.+.|-|+.++|. -.+|-|.|-|=||
T Consensus 88 P~Rkf~~~ff~-~Da~~avdLM~aLk----------~~~fsvlGWSdGg 125 (277)
T KOG2984|consen 88 PERKFEVQFFM-KDAEYAVDLMEALK----------LEPFSVLGWSDGG 125 (277)
T ss_pred CcccchHHHHH-HhHHHHHHHHHHhC----------CCCeeEeeecCCC
Confidence 3221 1111 46677778777763 2478999999999
No 190
>PLN03037 lipase class 3 family protein; Provisional
Probab=31.88 E-value=46 Score=35.03 Aligned_cols=34 Identities=12% Similarity=0.129 Sum_probs=25.6
Q ss_pred HhHHHHHHHHHHHHHHCCCC-CCCCeEEEcccccc
Q 012876 156 VTANDSYAFLIGWFKRFPNF-KSHDFYIAGESYAD 189 (454)
Q Consensus 156 ~~A~~~~~fL~~f~~~fp~~-~~~~~yI~GESYgG 189 (454)
.+.+++..-++...+.+++. ....++|+|||.||
T Consensus 295 SareQVl~eV~rLv~~Yk~~ge~~SItVTGHSLGG 329 (525)
T PLN03037 295 SASEQVMEEVKRLVNFFKDRGEEVSLTITGHSLGG 329 (525)
T ss_pred hhHHHHHHHHHHHHHhccccCCcceEEEeccCHHH
Confidence 34567777788888877643 34569999999999
No 191
>PF06414 Zeta_toxin: Zeta toxin; InterPro: IPR010488 This entry represents a domain originally identified in bacterial zeta toxin proteins, where it comprises the whole protein []. It has subsequently been found in a number of other proteins, such as polynucleotide kinase and 2',3'-cyclic-nucleotide 3'-phosphodiesterase. It appears to function as a kinase domain [, ].; GO: 0005524 ATP binding, 0016301 kinase activity; PDB: 2P5T_H 1GVN_B 3Q8X_D.
Probab=31.55 E-value=40 Score=30.54 Aligned_cols=35 Identities=23% Similarity=0.433 Sum_probs=21.5
Q ss_pred CCCCCeEEEeCCCCCc--hhhchhhhhhc----CCeEEcCCC
Q 012876 78 VSSKPLVLWLNGGPGC--SSIAYGAAQEL----GPFLVGGNG 113 (454)
Q Consensus 78 ~~~~PlilWlnGGPG~--SS~~~g~f~E~----GP~~~~~~~ 113 (454)
+...|+++.+-|+||| |++ ...+.+- |...|+.|.
T Consensus 11 ~~~~P~~~i~aG~~GsGKSt~-~~~~~~~~~~~~~v~i~~D~ 51 (199)
T PF06414_consen 11 PQEKPTLIIIAGQPGSGKSTL-ARQLLEEFGGGGIVVIDADE 51 (199)
T ss_dssp --SS-EEEEEES-TTSTTHHH-HHHHHHHT-TT-SEEE-GGG
T ss_pred cccCCEEEEEeCCCCCCHHHH-HHHhhhhccCCCeEEEehHH
Confidence 5689999999999999 677 3555552 456677764
No 192
>PLN02847 triacylglycerol lipase
Probab=31.48 E-value=47 Score=35.54 Aligned_cols=34 Identities=24% Similarity=0.354 Sum_probs=22.6
Q ss_pred ChHHhHHHHH----HHHHHHHHHCCCCCCCCeEEEcccccc
Q 012876 153 GDQVTANDSY----AFLIGWFKRFPNFKSHDFYIAGESYAD 189 (454)
Q Consensus 153 ~~~~~A~~~~----~fL~~f~~~fp~~~~~~~yI~GESYgG 189 (454)
+--.+|..+. ..|+.-+..+|.| ++.|+|||.||
T Consensus 225 Gml~AArwI~~~i~~~L~kal~~~PdY---kLVITGHSLGG 262 (633)
T PLN02847 225 GMVAAARWIAKLSTPCLLKALDEYPDF---KIKIVGHSLGG 262 (633)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHCCCC---eEEEeccChHH
Confidence 4444444444 4445555667765 78999999999
No 193
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=31.18 E-value=1.4e+02 Score=27.00 Aligned_cols=45 Identities=16% Similarity=0.174 Sum_probs=30.1
Q ss_pred CCeEEEEecCCCcccCchHHHHHHHHcCCCCccceeeceeCCeEeEEEEEeecCeEEEEEcCCccc
Q 012876 362 GLRIWVYSGDTDGRVPVTSTRYSINKMGLKIKEEWRAWFHKHQVAGWVETYEKGLTLVTVRGAGHQ 427 (454)
Q Consensus 362 ~~rVliy~Gd~D~i~~~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~Gy~~~~~~~Ltf~~V~gAGHm 427 (454)
+.+|++..|..|..++....+...+.|+=.+. ...+.+..|++|=
T Consensus 145 ~~P~l~~~g~~D~~~~~~~~~~~~~~l~~~~~---------------------~~~~~~y~ga~Hg 189 (218)
T PF01738_consen 145 KAPVLILFGENDPFFPPEEVEALEEALKAAGV---------------------DVEVHVYPGAGHG 189 (218)
T ss_dssp -S-EEEEEETT-TTS-HHHHHHHHHHHHCTTT---------------------TEEEEEETT--TT
T ss_pred CCCEeecCccCCCCCChHHHHHHHHHHHhcCC---------------------cEEEEECCCCccc
Confidence 68999999999999999988888877631111 4677778889885
No 194
>PRK04940 hypothetical protein; Provisional
Probab=30.50 E-value=66 Score=28.96 Aligned_cols=54 Identities=7% Similarity=-0.023 Sum_probs=33.4
Q ss_pred ChHHhHHHHHHHHHHHHHHCCCCCCCCeEEEcccccc-------cccCcceeeeecccccCCCcc
Q 012876 153 GDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAD-------SFINLKGFMIGNAVINDPTDT 210 (454)
Q Consensus 153 ~~~~~A~~~~~fL~~f~~~fp~~~~~~~yI~GESYgG-------~~inLkGi~iGng~~~p~~~~ 210 (454)
...++...+.+.+.++... .. ..++.|.|-|-|| ....++.| |.||.+.|....
T Consensus 38 ~P~~a~~~l~~~i~~~~~~--~~-~~~~~liGSSLGGyyA~~La~~~g~~aV-LiNPAv~P~~~L 98 (180)
T PRK04940 38 HPKHDMQHLLKEVDKMLQL--SD-DERPLICGVGLGGYWAERIGFLCGIRQV-IFNPNLFPEENM 98 (180)
T ss_pred CHHHHHHHHHHHHHHhhhc--cC-CCCcEEEEeChHHHHHHHHHHHHCCCEE-EECCCCChHHHH
Confidence 4555555555555443321 11 2468999999999 35666654 679999996543
No 195
>TIGR02011 IscA iron-sulfur cluster assembly protein IscA. This clade is limited to the proteobacteria.
Probab=30.40 E-value=40 Score=27.21 Aligned_cols=65 Identities=23% Similarity=0.449 Sum_probs=41.2
Q ss_pred CCeEEEeCCCCCchhhchhhh--hhcCC--eEEcCCCCcccccC--CCcccccceEEEeCCCccCCCCcCCC
Q 012876 81 KPLVLWLNGGPGCSSIAYGAA--QELGP--FLVGGNGSRLKFNK--YSWNKAANMLFLEAPVGVGFSYTNNS 146 (454)
Q Consensus 81 ~PlilWlnGGPG~SS~~~g~f--~E~GP--~~~~~~~~~l~~N~--~sW~~~anvlyIDqPvGtGfSy~~~~ 146 (454)
.+|=|-+.+| |||++.|.+- .|..+ ..+..++-++...+ ..+.+-+-|=|+|.+.|.||...+++
T Consensus 22 ~~lRi~v~~~-GCsG~~y~l~l~~~~~~~D~v~~~~g~~v~id~~s~~~l~g~~IDy~~~~~~~~F~~~nPn 92 (105)
T TIGR02011 22 FGLRLGVKTS-GCSGMAYVLEFVDEPTPDDIVFEDKGVKIVIDGKSLQYLDGTQLDFVKEGLNEGFKFTNPN 92 (105)
T ss_pred ceEEEEEeCC-CCCCEEEEeeecCCCCCCCEEEEcCCEEEEEcHHHhHHhCCCEEEEecCCCcceEEEECCC
Confidence 4566777765 9998556653 34433 23344444444444 34777788889999999999875533
No 196
>PRK06762 hypothetical protein; Provisional
Probab=29.82 E-value=31 Score=30.06 Aligned_cols=21 Identities=29% Similarity=0.509 Sum_probs=15.2
Q ss_pred CeEEEeCCCCCc--hhhchhhhhh
Q 012876 82 PLVLWLNGGPGC--SSIAYGAAQE 103 (454)
Q Consensus 82 PlilWlnGGPG~--SS~~~g~f~E 103 (454)
|.+||+.|.||| |.+. -.+.+
T Consensus 2 ~~li~i~G~~GsGKST~A-~~L~~ 24 (166)
T PRK06762 2 TTLIIIRGNSGSGKTTIA-KQLQE 24 (166)
T ss_pred CeEEEEECCCCCCHHHHH-HHHHH
Confidence 789999999999 4452 44443
No 197
>TIGR03341 YhgI_GntY IscR-regulated protein YhgI. IscR (TIGR02010) is an iron-sulfur cluster-binding transcriptional regulator (see Genome Property GenProp0138). Members of this protein family include YhgI, whose expression is under control of IscR, and show sequence similarity to IscA, a known protein of iron-sulfur cluster biosynthesis. These two lines of evidence strongly suggest a role as an iron-sulfur cluster biosynthesis protein. An older study designated this protein GntY and suggested a role for it and for the product of an adjacent gene, based on complementation studies, in gluconate utilization.
Probab=29.27 E-value=55 Score=29.72 Aligned_cols=64 Identities=13% Similarity=0.193 Sum_probs=42.0
Q ss_pred CeEEEeCCCCCchhhchhhh----hhc--CCeEEcCCCCcccccCC--CcccccceEEEeCCCccCCCCcCCC
Q 012876 82 PLVLWLNGGPGCSSIAYGAA----QEL--GPFLVGGNGSRLKFNKY--SWNKAANMLFLEAPVGVGFSYTNNS 146 (454)
Q Consensus 82 PlilWlnGGPG~SS~~~g~f----~E~--GP~~~~~~~~~l~~N~~--sW~~~anvlyIDqPvGtGfSy~~~~ 146 (454)
.|=|-+.| .|||++.|++= .|. +=..+..++-++.-.+- .+.+-+-|=|++...|.||.+.+++
T Consensus 23 ~LRv~V~~-gGCsG~~Y~l~~~~~~~~~~~D~v~e~~g~~v~Vd~~s~~~L~g~~IDyve~~~g~gF~f~NPn 94 (190)
T TIGR03341 23 GIRVFVVN-PGTPYAECCVSYCPPDEVEPSDIKLEFNGFSAYVDALSAPFLEDAVIDFVTDRMGGQLTLKAPN 94 (190)
T ss_pred eEEEEEEC-CccCCceeeeEEcccCCCCCCCEEEEeCCEEEEEccchhhHhCCCEEEEeecCCCceeEEeCCc
Confidence 35566665 59997655552 222 22344445555555554 4788889999999999999987654
No 198
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=29.19 E-value=93 Score=30.62 Aligned_cols=89 Identities=15% Similarity=0.160 Sum_probs=54.6
Q ss_pred cCCCCCCCeEEEeCCCCCchhhchhhhhhcCCeEEcCCCCcccccCCCcccccceEEEeCCCccCCCCcCCCCCCcccCh
Q 012876 75 QKGVSSKPLVLWLNGGPGCSSIAYGAAQELGPFLVGGNGSRLKFNKYSWNKAANMLFLEAPVGVGFSYTNNSEDLHKLGD 154 (454)
Q Consensus 75 ~~~~~~~PlilWlnGGPG~SS~~~g~f~E~GP~~~~~~~~~l~~N~~sW~~~anvlyIDqPvGtGfSy~~~~~~~~~~~~ 154 (454)
..+....|-++-+.|==|.-=. +.-+.-+ -. .++ -+.++-||. --.|.|.....- +-
T Consensus 46 ~~~~~~~Pp~i~lHGl~GS~~N-w~sv~k~------Ls-~~l---------~~~v~~vd~-RnHG~Sp~~~~h-----~~ 102 (315)
T KOG2382|consen 46 SENLERAPPAIILHGLLGSKEN-WRSVAKN------LS-RKL---------GRDVYAVDV-RNHGSSPKITVH-----NY 102 (315)
T ss_pred ccccCCCCceEEecccccCCCC-HHHHHHH------hc-ccc---------cCceEEEec-ccCCCCcccccc-----CH
Confidence 3456788888888865444322 2211110 00 011 126777884 688988654433 56
Q ss_pred HHhHHHHHHHHHHHHHHCCCCCCCCeEEEcccccc
Q 012876 155 QVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAD 189 (454)
Q Consensus 155 ~~~A~~~~~fL~~f~~~fp~~~~~~~yI~GESYgG 189 (454)
...|+|+..||..+-. .++..+..|.|||.||
T Consensus 103 ~~ma~dv~~Fi~~v~~---~~~~~~~~l~GHsmGG 134 (315)
T KOG2382|consen 103 EAMAEDVKLFIDGVGG---STRLDPVVLLGHSMGG 134 (315)
T ss_pred HHHHHHHHHHHHHccc---ccccCCceecccCcch
Confidence 6788888877766443 2456688999999999
No 199
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=29.05 E-value=62 Score=29.87 Aligned_cols=36 Identities=14% Similarity=0.169 Sum_probs=27.5
Q ss_pred ChHHhHHHHHHHHHHHHHHCCCCCCCCeEEEcccccc
Q 012876 153 GDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAD 189 (454)
Q Consensus 153 ~~~~~A~~~~~fL~~f~~~fp~~~~~~~yI~GESYgG 189 (454)
+-+..++.+.+.|.+..+..+.- .+++.+.|+|.||
T Consensus 54 gI~~~g~rL~~eI~~~~~~~~~~-~~~IsfIgHSLGG 89 (217)
T PF05057_consen 54 GIDVCGERLAEEILEHIKDYESK-IRKISFIGHSLGG 89 (217)
T ss_pred hhHHHHHHHHHHHHHhccccccc-cccceEEEecccH
Confidence 44557888888888877766433 4689999999998
No 200
>PLN02561 triosephosphate isomerase
Probab=28.63 E-value=1.1e+02 Score=29.21 Aligned_cols=48 Identities=19% Similarity=0.360 Sum_probs=33.0
Q ss_pred HhHHHHHHHHHHHHHH-CCCCCCCCeEEEcccccc-----------cccCcceeeeecccccC
Q 012876 156 VTANDSYAFLIGWFKR-FPNFKSHDFYIAGESYAD-----------SFINLKGFMIGNAVIND 206 (454)
Q Consensus 156 ~~A~~~~~fL~~f~~~-fp~~~~~~~yI~GESYgG-----------~~inLkGi~iGng~~~p 206 (454)
+.++....+++.++.+ |..-....+-|. ||| ...++.|+.||.+.+++
T Consensus 180 ~~~~~v~~~Ir~~l~~~~~~~~a~~i~IL---YGGSV~~~N~~~l~~~~~iDG~LVG~ASL~~ 239 (253)
T PLN02561 180 AQAQEVHDELRKWLHKNVSPEVAATTRII---YGGSVTGANCKELAAQPDVDGFLVGGASLKP 239 (253)
T ss_pred HHHHHHHHHHHHHHHHhhcccccccceEE---EeCCcCHHHHHHHhcCCCCCeEEEehHhhHH
Confidence 3577778888888753 432222233343 888 46789999999999986
No 201
>PRK09504 sufA iron-sulfur cluster assembly scaffold protein; Provisional
Probab=28.47 E-value=48 Score=27.70 Aligned_cols=64 Identities=16% Similarity=0.290 Sum_probs=41.3
Q ss_pred CCeEEEeCCCCCchhhchhhh--hhcCC--eEEcCCCCcccccCC--CcccccceEEEeCCCccCCCCcCC
Q 012876 81 KPLVLWLNGGPGCSSIAYGAA--QELGP--FLVGGNGSRLKFNKY--SWNKAANMLFLEAPVGVGFSYTNN 145 (454)
Q Consensus 81 ~PlilWlnGGPG~SS~~~g~f--~E~GP--~~~~~~~~~l~~N~~--sW~~~anvlyIDqPvGtGfSy~~~ 145 (454)
..|=|-+.|| |||++.|++- .|..| ..+..++.++...+. .+.+-+.|=|+|.+.|.||-+.++
T Consensus 39 ~~LRi~v~~g-GCsG~~Y~~~l~~e~~~~D~v~e~~g~~v~Id~~s~~~L~g~~IDy~~~~~~~gF~f~NP 108 (122)
T PRK09504 39 KGVRLGVKQT-GCAGFGYVLDSVSEPDKDDLVFEHDGAKLFVPLQAMPFIDGTEVDYVREGLNQIFKFHNP 108 (122)
T ss_pred ceEEEEEECC-CCCceEEEeeecCCCCCCCEEEEeCCEEEEEcHHHHHhhCCcEEEeecCCCcceEEEECC
Confidence 4577777755 9998766553 34444 334444444444443 467778888999999999987554
No 202
>PF10609 ParA: ParA/MinD ATPase like; InterPro: IPR019591 This entry represents ATPases involved in plasmid partitioning []. It also contains cytosolic Fe-S cluster assembling factors, NBP35 and CFD1 which are required for biogenesis and export of both ribosomal subunits probably through assembling the ISCs in RLI1, a protein which performs rRNA processing and ribosome export [, , ].; PDB: 2PH1_A 3KB1_B.
Probab=28.02 E-value=38 Score=26.16 Aligned_cols=12 Identities=33% Similarity=0.841 Sum_probs=8.1
Q ss_pred ceEEEeCCCccC
Q 012876 128 NMLFLEAPVGVG 139 (454)
Q Consensus 128 nvlyIDqPvGtG 139 (454)
+.|-||-|.|||
T Consensus 2 D~LiiD~PPGTg 13 (81)
T PF10609_consen 2 DYLIIDLPPGTG 13 (81)
T ss_dssp CEEEEE--SCSS
T ss_pred CEEEEeCCCCCC
Confidence 467899999988
No 203
>PLN03207 stomagen; Provisional
Probab=27.82 E-value=1e+02 Score=24.59 Aligned_cols=23 Identities=39% Similarity=0.349 Sum_probs=12.1
Q ss_pred CchhHHHHHHHHHH-HHHhhhccc
Q 012876 4 TSNCLLCFMLCTLL-VSAVASRSR 26 (454)
Q Consensus 4 ~~~~~~~~~~~~~~-~~~~~~~~~ 26 (454)
|+-|.|.++||+|+ .+.+-+.++
T Consensus 10 t~~~~lffLl~~llla~~v~qgsr 33 (113)
T PLN03207 10 TRCLTLFFLLFFLLLGAYVIQGSR 33 (113)
T ss_pred chhHHHHHHHHHHHHHHHHHhccc
Confidence 34444666666554 345555555
No 204
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=27.46 E-value=1.4e+02 Score=28.24 Aligned_cols=58 Identities=22% Similarity=0.248 Sum_probs=35.3
Q ss_pred cceEEEeCCCccCCCCcCCCCCCcccC-hHHhHHHHHHHHHHHHHHCCCCCCCCeEEEcccccc
Q 012876 127 ANMLFLEAPVGVGFSYTNNSEDLHKLG-DQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAD 189 (454)
Q Consensus 127 anvlyIDqPvGtGfSy~~~~~~~~~~~-~~~~A~~~~~fL~~f~~~fp~~~~~~~yI~GESYgG 189 (454)
..|+-.| --|.|=|.......... . -|=+-.|+-.+|...-..-| ..|.|..|+||||
T Consensus 58 f~Vlt~d-yRG~g~S~p~~~~~~~~-~~~DwA~~D~~aal~~~~~~~~---~~P~y~vgHS~GG 116 (281)
T COG4757 58 FEVLTFD-YRGIGQSRPASLSGSQW-RYLDWARLDFPAALAALKKALP---GHPLYFVGHSFGG 116 (281)
T ss_pred ceEEEEe-cccccCCCccccccCcc-chhhhhhcchHHHHHHHHhhCC---CCceEEeeccccc
Confidence 4677777 57888887654432221 1 22244555555544433333 5689999999999
No 205
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=27.01 E-value=45 Score=30.71 Aligned_cols=48 Identities=19% Similarity=0.208 Sum_probs=28.4
Q ss_pred CCeEEEEecCCCcccCchHHH-HHHHHcCCCCccceeeceeCCeEeEEEEEeecCeEEEEEcCCcccc
Q 012876 362 GLRIWVYSGDTDGRVPVTSTR-YSINKMGLKIKEEWRAWFHKHQVAGWVETYEKGLTLVTVRGAGHQV 428 (454)
Q Consensus 362 ~~rVliy~Gd~D~i~~~~Gt~-~~i~~L~w~~~~~~~~w~~~~~~~Gy~~~~~~~Ltf~~V~gAGHmv 428 (454)
+-+||+.+|..|.+.|..-.. ..++.|+=.+.. .+++.+...+|||+.
T Consensus 115 ~~piLli~g~dD~~WpS~~~a~~i~~rL~~~~~~-------------------~~~~~l~Y~~aGH~i 163 (213)
T PF08840_consen 115 KGPILLISGEDDQIWPSSEMAEQIEERLKAAGFP-------------------HNVEHLSYPGAGHLI 163 (213)
T ss_dssp -SEEEEEEETT-SSS-HHHHHHHHHHHHHCTT------------------------EEEEETTB-S--
T ss_pred CCCEEEEEeCCCCccchHHHHHHHHHHHHHhCCC-------------------CcceEEEcCCCCcee
Confidence 689999999999998876644 444566533322 157788889999996
No 206
>PRK09502 iscA iron-sulfur cluster assembly protein; Provisional
Probab=26.92 E-value=33 Score=27.85 Aligned_cols=64 Identities=23% Similarity=0.458 Sum_probs=39.1
Q ss_pred CeEEEeCCCCCchhhchhhh--hhcCC--eEEcCCCCcccccC--CCcccccceEEEeCCCccCCCCcCCC
Q 012876 82 PLVLWLNGGPGCSSIAYGAA--QELGP--FLVGGNGSRLKFNK--YSWNKAANMLFLEAPVGVGFSYTNNS 146 (454)
Q Consensus 82 PlilWlnGGPG~SS~~~g~f--~E~GP--~~~~~~~~~l~~N~--~sW~~~anvlyIDqPvGtGfSy~~~~ 146 (454)
.|=|-+. +.|||++.|.+- .|..+ ..+..++-++...+ ..+.+-+-|=|+|.+.|.||...+++
T Consensus 25 ~LRi~v~-~~GCsG~~Y~l~~~~~~~~~D~~~~~~g~~v~id~~s~~~l~g~~IDy~~~~~~~~F~f~NPn 94 (107)
T PRK09502 25 GLRLGVR-TSGCSGMAYVLEFVDEPTPEDIVFEDKGVKVVVDGKSLQFLDGTQLDFVKEGLNEGFKFTNPN 94 (107)
T ss_pred eEEEEEE-CCCcCCeeeEeeecCCCCCCCEEEEcCCeEEEEeHHHHhHhCCCEEEEeeCCCCceEEEECCC
Confidence 3555555 558888655543 33322 23333443444433 45777888999999999999886543
No 207
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=26.86 E-value=47 Score=30.27 Aligned_cols=27 Identities=22% Similarity=0.042 Sum_probs=23.6
Q ss_pred CeEEEEecCCCcccCchHHHHHHHHcC
Q 012876 363 LRIWVYSGDTDGRVPVTSTRYSINKMG 389 (454)
Q Consensus 363 ~rVliy~Gd~D~i~~~~Gt~~~i~~L~ 389 (454)
-+++|++|..|.+||....+...++|+
T Consensus 169 p~~~i~hG~~D~vVp~~~~~~~~~~l~ 195 (212)
T TIGR01840 169 PIMSVVHGDADYTVLPGNADEIRDAML 195 (212)
T ss_pred CeEEEEEcCCCceeCcchHHHHHHHHH
Confidence 457899999999999999999888775
No 208
>PF01555 N6_N4_Mtase: DNA methylase; InterPro: IPR002941 This domain is found in DNA methylases. In prokaryotes, the major role of DNA methylation is to protect host DNA against degradation by restriction enzymes. This family contains both N-4 cytosine-specific DNA methylases and N-6 Adenine-specific DNA methylases. N-4 cytosine-specific DNA methylases (2.1.1.113 from EC) [] are enzymes that specifically methylate the amino group at the C-4 position of cytosines in DNA. Such enzymes are found as components of type II restriction-modification systems in prokaryotes. Such enzymes recognise a specific sequence in DNA and methylate a cytosine in that sequence. By this action they protect DNA from cleavage by type II restriction enzymes that recognise the same sequence. N-6 adenine-specific DNA methylases (2.1.1.72 from EC) (A-Mtase) are enzymes that specifically methylate the amino group at the C-6 position of adenines in DNA. Such enzymes are found in the three existing types of bacterial restriction-modification systems (in type I system the A-Mtase is the product of the hsdM gene, and in type III it is the product of the mod gene). All of these enzymes recognise a specific sequence in DNA and methylate an adenine in that sequence.; GO: 0003677 DNA binding, 0008170 N-methyltransferase activity, 0006306 DNA methylation; PDB: 2ZIF_A 2ZIE_A 2ZIG_A 1NW6_A 1NW8_A 1NW7_A 1NW5_A 1EG2_A 1BOO_A 1G60_B ....
Probab=26.61 E-value=79 Score=28.63 Aligned_cols=40 Identities=23% Similarity=0.595 Sum_probs=23.4
Q ss_pred ceEEEeCCCccCCCCcCCCCCCcccChHHhHHHHHHHHHHHHHH
Q 012876 128 NMLFLEAPVGVGFSYTNNSEDLHKLGDQVTANDSYAFLIGWFKR 171 (454)
Q Consensus 128 nvlyIDqPvGtGfSy~~~~~~~~~~~~~~~A~~~~~fL~~f~~~ 171 (454)
++|++|+|=++|..+.... .+ ++....++..+++..++..
T Consensus 2 dliitDPPY~~~~~~~~~~-~~---~~~~~~~~y~~~~~~~~~~ 41 (231)
T PF01555_consen 2 DLIITDPPYNIGKDYNNYF-DY---GDNKNHEEYLEWMEEWLKE 41 (231)
T ss_dssp EEEEE---TSSSCS------CS---CHCCHHHHHHHHHHHHHHH
T ss_pred CEEEECCCCCCCCCcchhh-hc---cCCCCHHHHHHHHHHHHHH
Confidence 7899999999999962222 11 4555577777777777764
No 209
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=26.42 E-value=78 Score=29.52 Aligned_cols=24 Identities=29% Similarity=0.610 Sum_probs=17.9
Q ss_pred HHHHHHHHHHCCCCCCCCeEEEcccccc
Q 012876 162 YAFLIGWFKRFPNFKSHDFYIAGESYAD 189 (454)
Q Consensus 162 ~~fL~~f~~~fp~~~~~~~yI~GESYgG 189 (454)
.++++.....+++ +++|+|||=||
T Consensus 72 ~~yl~~~~~~~~~----~i~v~GHSkGG 95 (224)
T PF11187_consen 72 LAYLKKIAKKYPG----KIYVTGHSKGG 95 (224)
T ss_pred HHHHHHHHHhCCC----CEEEEEechhh
Confidence 3456666666654 69999999998
No 210
>PF01583 APS_kinase: Adenylylsulphate kinase; InterPro: IPR002891 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This domain contains an ATP binding P-loop motif [].; GO: 0005524 ATP binding, 0016301 kinase activity, 0016772 transferase activity, transferring phosphorus-containing groups, 0000103 sulfate assimilation; PDB: 1M7H_B 1M7G_B 3CR7_B 1D6J_A 2OFW_G 1X6V_B 1XNJ_A 1XJQ_B 2PEY_A 2PEZ_B ....
Probab=26.12 E-value=38 Score=29.69 Aligned_cols=25 Identities=28% Similarity=0.478 Sum_probs=16.9
Q ss_pred CCeEEEeCCCCCch------hhchhhhhhcCC
Q 012876 81 KPLVLWLNGGPGCS------SIAYGAAQELGP 106 (454)
Q Consensus 81 ~PlilWlnGGPG~S------S~~~g~f~E~GP 106 (454)
+|.+|||+|=||+. .+ .-.|.+.|+
T Consensus 1 ~g~vIwltGlsGsGKtTlA~~L-~~~L~~~g~ 31 (156)
T PF01583_consen 1 KGFVIWLTGLSGSGKTTLARAL-ERRLFARGI 31 (156)
T ss_dssp S-EEEEEESSTTSSHHHHHHHH-HHHHHHTTS
T ss_pred CCEEEEEECCCCCCHHHHHHHH-HHHHHHcCC
Confidence 58999999999983 34 244555665
No 211
>PRK00042 tpiA triosephosphate isomerase; Provisional
Probab=26.07 E-value=1.5e+02 Score=28.24 Aligned_cols=49 Identities=16% Similarity=0.324 Sum_probs=33.2
Q ss_pred HhHHHHHHHHHHHHHH-CCCCCCCCeEEEcccccc-----------cccCcceeeeecccccCCC
Q 012876 156 VTANDSYAFLIGWFKR-FPNFKSHDFYIAGESYAD-----------SFINLKGFMIGNAVINDPT 208 (454)
Q Consensus 156 ~~A~~~~~fL~~f~~~-fp~~~~~~~yI~GESYgG-----------~~inLkGi~iGng~~~p~~ 208 (454)
+.++.+.+|+++++.. +.+ ....+-|. ||| ...++.|+.||.+.+++..
T Consensus 180 ~~~~~v~~~Ir~~l~~~~~~-~~~~~~Il---YGGSV~~~N~~~l~~~~~vDG~LVG~Asl~~~~ 240 (250)
T PRK00042 180 EQAQEVHAFIRAVLAELYGE-VAEKVRIL---YGGSVKPDNAAELMAQPDIDGALVGGASLKAED 240 (250)
T ss_pred HHHHHHHHHHHHHHHHhccc-ccCCceEE---EcCCCCHHHHHHHhcCCCCCEEEEeeeeechHH
Confidence 4678888888888763 321 12233333 888 4668999999999987643
No 212
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=25.71 E-value=95 Score=28.35 Aligned_cols=63 Identities=24% Similarity=0.281 Sum_probs=43.2
Q ss_pred CCccCCCCcCCCCCCcccChHHhHHHHHHHHHHHHHHCCCCCCCCeEEEcccccc--------cccCcceeeeeccccc
Q 012876 135 PVGVGFSYTNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAD--------SFINLKGFMIGNAVIN 205 (454)
Q Consensus 135 PvGtGfSy~~~~~~~~~~~~~~~A~~~~~fL~~f~~~fp~~~~~~~yI~GESYgG--------~~inLkGi~iGng~~~ 205 (454)
=-|||-|-++-.... .+.+.|.....+++. ++|+-+ .+.++|-|+|+ ..-...+.+...+.++
T Consensus 68 fRgVG~S~G~fD~Gi---GE~~Da~aaldW~~~---~hp~s~--~~~l~GfSFGa~Ia~~la~r~~e~~~~is~~p~~~ 138 (210)
T COG2945 68 FRGVGRSQGEFDNGI---GELEDAAAALDWLQA---RHPDSA--SCWLAGFSFGAYIAMQLAMRRPEILVFISILPPIN 138 (210)
T ss_pred ccccccccCcccCCc---chHHHHHHHHHHHHh---hCCCch--hhhhcccchHHHHHHHHHHhcccccceeeccCCCC
Confidence 469999988755543 566677776666664 677643 36899999999 2335566666666665
No 213
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=25.35 E-value=3.2e+02 Score=26.07 Aligned_cols=31 Identities=16% Similarity=0.051 Sum_probs=24.0
Q ss_pred ChHHhHHHHHHHHHHHHHHCCCCCCCCeEEEcccccc
Q 012876 153 GDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAD 189 (454)
Q Consensus 153 ~~~~~A~~~~~fL~~f~~~fp~~~~~~~yI~GESYgG 189 (454)
+-++.++.....|+ +..|+= |+++.|.|+||
T Consensus 46 ~l~~~a~~yv~~Ir---~~QP~G---Py~L~G~S~GG 76 (257)
T COG3319 46 SLDDMAAAYVAAIR---RVQPEG---PYVLLGWSLGG 76 (257)
T ss_pred CHHHHHHHHHHHHH---HhCCCC---CEEEEeecccc
Confidence 66777777766665 467753 89999999999
No 214
>PF06309 Torsin: Torsin; InterPro: IPR010448 This family consists of several eukaryotic torsin proteins. Torsion dystonia is an autosomal dominant movement disorder characterised by involuntary, repetitive muscle contractions and twisted postures. The most severe early-onset form of dystonia has been linked to mutations in the human DYT1 (TOR1A) gene encoding a protein termed torsinA. While causative genetic alterations have been identified, the function of torsin proteins and the molecular mechanism underlying dystonia remain unknown. Phylogenetic analysis of the torsin protein family indicates these proteins share distant sequence similarity with the large and diverse family of AAA ATPase, central region containing proteins () proteins. It has been suggested that torsins play a role in effectively managing protein folding and that possible breakdown in a neuroprotective mechanism that is, in part, mediated by torsins may be responsible for the neuronal dysfunction associated with dystonia [].; GO: 0005524 ATP binding, 0051085 chaperone mediated protein folding requiring cofactor
Probab=25.18 E-value=59 Score=27.44 Aligned_cols=18 Identities=39% Similarity=0.514 Sum_probs=15.6
Q ss_pred CCCCCCeEEEeCCCCCch
Q 012876 77 GVSSKPLVLWLNGGPGCS 94 (454)
Q Consensus 77 ~~~~~PlilWlnGGPG~S 94 (454)
...++||||=|.|.||+.
T Consensus 48 ~~p~KpLVlSfHG~tGtG 65 (127)
T PF06309_consen 48 PNPRKPLVLSFHGWTGTG 65 (127)
T ss_pred CCCCCCEEEEeecCCCCc
Confidence 357899999999999983
No 215
>PF05782 ECM1: Extracellular matrix protein 1 (ECM1); InterPro: IPR008605 This family consists of several eukaryotic extracellular matrix protein 1 (ECM1) sequences. ECM1 has been shown to regulate endochondral bone formation, stimulate the proliferation of endothelial cells and induce angiogenesis. Mutations in the ECM1 gene can cause lipoid proteinosis, a disorder which causes generalised thickening of skin, mucosae and certain viscera. Classical features include beaded eyelid papules and laryngeal infiltration leading to hoarseness [].; GO: 0005576 extracellular region
Probab=25.00 E-value=63 Score=33.24 Aligned_cols=43 Identities=16% Similarity=0.164 Sum_probs=30.2
Q ss_pred CCCCchhHHHHHHHHHHHHHhhhccccccCCccccCcceecCC
Q 012876 1 MGSTSNCLLCFMLCTLLVSAVASRSRVSHQTTEADADRVRDLP 43 (454)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~lp 43 (454)
||.+|-.+|+++++.+..+|..++.+.+.|....+...+-++.
T Consensus 1 MGt~srAALvLacLAvaSaASeGg~k~s~QRE~~Pe~l~qh~~ 43 (544)
T PF05782_consen 1 MGTMSRAALVLACLAVASAASEGGFKASEQRELRPEHLFQHFQ 43 (544)
T ss_pred CchHHHHHHHHHHHHHHHHhhcCCCCCccccccCccccccchh
Confidence 8999999999888888888877777766655433333334444
No 216
>PF15253 STIL_N: SCL-interrupting locus protein N-terminus
Probab=24.58 E-value=94 Score=31.68 Aligned_cols=35 Identities=31% Similarity=0.710 Sum_probs=25.5
Q ss_pred eEEEeEEecCCCCceeEEEEEEecCCCCCCCeE-EEeCC
Q 012876 52 HYAGYVKLRPNDHKALFYWFFEAQKGVSSKPLV-LWLNG 89 (454)
Q Consensus 52 ~~sGyl~v~~~~~~~lfy~f~es~~~~~~~Pli-lWlnG 89 (454)
...|||+++. .+++.. ..|+.....+-||| +||.|
T Consensus 200 ~k~GfLTmDq--tRkl~l-LlesDpk~~slPLVGiWlsG 235 (410)
T PF15253_consen 200 YKSGFLTMDQ--TRKLLL-LLESDPKASSLPLVGIWLSG 235 (410)
T ss_pred cccceeeEcc--ccceEE-EeccCCCccCCCceeeEecC
Confidence 5699999986 466777 66665445666876 89985
No 217
>PF15613 WHIM2: WSTF, HB1, Itc1p, MBD9 motif 2
Probab=24.47 E-value=1.4e+02 Score=19.48 Aligned_cols=27 Identities=15% Similarity=0.385 Sum_probs=13.1
Q ss_pred eeEEEEEEecCCCCCCCeEEEeCCCCC
Q 012876 66 ALFYWFFEAQKGVSSKPLVLWLNGGPG 92 (454)
Q Consensus 66 ~lfy~f~es~~~~~~~PlilWlnGGPG 92 (454)
+-+|||-.+........--+|+.+||+
T Consensus 12 NrYwwf~~s~~~~~~~~~~~~v~~~~~ 38 (38)
T PF15613_consen 12 NRYWWFSSSSSNSQYYNGGRFVEQGPD 38 (38)
T ss_pred ceEEEEecccccCCCCCceEEEEeCCC
Confidence 456667444433333334444555664
No 218
>cd00311 TIM Triosephosphate isomerase (TIM) is a glycolytic enzyme that catalyzes the interconversion of dihydroxyacetone phosphate and D-glyceraldehyde-3-phosphate. The reaction is very efficient and requires neither cofactors nor metal ions. TIM, usually homodimeric, but in some organisms tetrameric, is ubiqitous and conserved in function across eukaryotes, bacteria and archaea.
Probab=23.65 E-value=1.8e+02 Score=27.55 Aligned_cols=48 Identities=17% Similarity=0.327 Sum_probs=32.2
Q ss_pred HhHHHHHHHHHHHHHH-CCCCCCCCeEEEcccccc----------c-ccCcceeeeecccccCC
Q 012876 156 VTANDSYAFLIGWFKR-FPNFKSHDFYIAGESYAD----------S-FINLKGFMIGNAVINDP 207 (454)
Q Consensus 156 ~~A~~~~~fL~~f~~~-fp~~~~~~~yI~GESYgG----------~-~inLkGi~iGng~~~p~ 207 (454)
+.+++...++++++.. +.+ ....+-|. ||| . .-++.|+.||.+.+++.
T Consensus 176 ~~~~ev~~~ir~~l~~~~~~-~~~~~~Il---YGGSV~~~N~~~l~~~~~vDG~LVG~Asl~~~ 235 (242)
T cd00311 176 EQAQEVHAFIRKLLAELYGE-VAEKVRIL---YGGSVNPENAAELLAQPDIDGVLVGGASLKAE 235 (242)
T ss_pred HHHHHHHHHHHHHHHHhccc-ccCceeEE---ECCCCCHHHHHHHhcCCCCCEEEeehHhhCHH
Confidence 3577888888888864 332 22233333 888 2 33599999999998753
No 219
>PRK14731 coaE dephospho-CoA kinase; Provisional
Probab=23.50 E-value=87 Score=28.64 Aligned_cols=32 Identities=28% Similarity=0.444 Sum_probs=26.2
Q ss_pred CCCeEEEeCCCCCc--hhhchhhhhhcCCeEEcCC
Q 012876 80 SKPLVLWLNGGPGC--SSIAYGAAQELGPFLVGGN 112 (454)
Q Consensus 80 ~~PlilWlnGGPG~--SS~~~g~f~E~GP~~~~~~ 112 (454)
..|++|=+.||+|| |.+ .-+|.+.|-..++.|
T Consensus 3 ~~~~~igitG~igsGKSt~-~~~l~~~g~~v~d~D 36 (208)
T PRK14731 3 SLPFLVGVTGGIGSGKSTV-CRFLAEMGCELFEAD 36 (208)
T ss_pred CCCEEEEEECCCCCCHHHH-HHHHHHCCCeEEecc
Confidence 35789999999999 677 588888888777766
No 220
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=23.30 E-value=98 Score=34.28 Aligned_cols=91 Identities=19% Similarity=0.253 Sum_probs=52.0
Q ss_pred CCeEEEeCCCCCc-------hhhchhhhhhcCCeEEcCCCCcccccCCCcccccceEEEeCCCccCCCCcCCCCCCcccC
Q 012876 81 KPLVLWLNGGPGC-------SSIAYGAAQELGPFLVGGNGSRLKFNKYSWNKAANMLFLEAPVGVGFSYTNNSEDLHKLG 153 (454)
Q Consensus 81 ~PlilWlnGGPG~-------SS~~~g~f~E~GP~~~~~~~~~l~~N~~sW~~~anvlyIDqPvGtGfSy~~~~~~~~~~~ 153 (454)
-| ||++-|--|+ .|.. .+-...||++=.. -.+||++. +-.-+| ..=-||-- ... .
T Consensus 90 IP-VLFIPGNAGSyKQvRSiAS~a-~n~y~~~~~e~t~----~~d~~~~~----DFFaVD--FnEe~tAm-----~G~-~ 151 (973)
T KOG3724|consen 90 IP-VLFIPGNAGSYKQVRSIASVA-QNAYQGGPFEKTE----DRDNPFSF----DFFAVD--FNEEFTAM-----HGH-I 151 (973)
T ss_pred ce-EEEecCCCCchHHHHHHHHHH-hhhhcCCchhhhh----cccCcccc----ceEEEc--ccchhhhh-----ccH-h
Confidence 34 5667776665 3552 5666789988222 24577665 333344 11122211 111 4
Q ss_pred hHHhHHHHHHHHHHHH---HHCCCCC---CCCeEEEcccccc
Q 012876 154 DQVTANDSYAFLIGWF---KRFPNFK---SHDFYIAGESYAD 189 (454)
Q Consensus 154 ~~~~A~~~~~fL~~f~---~~fp~~~---~~~~yI~GESYgG 189 (454)
..+.++.+.+++.--+ +.-+|++ ...+.|.||||||
T Consensus 152 l~dQtEYV~dAIk~ILslYr~~~e~~~p~P~sVILVGHSMGG 193 (973)
T KOG3724|consen 152 LLDQTEYVNDAIKYILSLYRGEREYASPLPHSVILVGHSMGG 193 (973)
T ss_pred HHHHHHHHHHHHHHHHHHhhcccccCCCCCceEEEEeccchh
Confidence 5667777776665444 4434565 4559999999999
No 221
>PF14020 DUF4236: Protein of unknown function (DUF4236)
Probab=23.19 E-value=85 Score=22.30 Aligned_cols=15 Identities=33% Similarity=0.620 Sum_probs=10.9
Q ss_pred ceEEEeCCCccCCCCc
Q 012876 128 NMLFLEAPVGVGFSYT 143 (454)
Q Consensus 128 nvlyIDqPvGtGfSy~ 143 (454)
--+.++-| |+|+||.
T Consensus 40 ~~~t~~iP-GtGlsyr 54 (55)
T PF14020_consen 40 RRTTVGIP-GTGLSYR 54 (55)
T ss_pred cEEEEEcC-CCccEEe
Confidence 34667766 9999984
No 222
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=23.11 E-value=8.5e+02 Score=25.17 Aligned_cols=119 Identities=17% Similarity=0.112 Sum_probs=69.9
Q ss_pred CCCCCCeEEEeCCCCCchhhchhhhhhcCCeEEcCCCCcccccCCCcccccceEEEeCCCccCCCCcCCCCCCcccChHH
Q 012876 77 GVSSKPLVLWLNGGPGCSSIAYGAAQELGPFLVGGNGSRLKFNKYSWNKAANMLFLEAPVGVGFSYTNNSEDLHKLGDQV 156 (454)
Q Consensus 77 ~~~~~PlilWlnGGPG~SS~~~g~f~E~GP~~~~~~~~~l~~N~~sW~~~anvlyIDqPvGtGfSy~~~~~~~~~~~~~~ 156 (454)
...++|.||..+| |++.. .|.+- +-+=.=.+|.|+|+.= =-|=|.... .+....+-.|
T Consensus 59 k~~drPtV~~T~G--------Y~~~~--~p~r~----------Ept~Lld~NQl~vEhR-fF~~SrP~p-~DW~~Lti~Q 116 (448)
T PF05576_consen 59 KDFDRPTVLYTEG--------YNVST--SPRRS----------EPTQLLDGNQLSVEHR-FFGPSRPEP-ADWSYLTIWQ 116 (448)
T ss_pred cCCCCCeEEEecC--------ccccc--Ccccc----------chhHhhccceEEEEEe-eccCCCCCC-CCcccccHhH
Confidence 3467899999886 33321 23221 1222335788888852 222243322 3333347889
Q ss_pred hHHHHHHHHHHHHHHCCCCCCCCeEEEcccccc---------cccCcceeeeecccccC-CCccchhHHHhhhcc
Q 012876 157 TANDSYAFLIGWFKRFPNFKSHDFYIAGESYAD---------SFINLKGFMIGNAVIND-PTDTKGLVDYAWSHA 221 (454)
Q Consensus 157 ~A~~~~~fL~~f~~~fp~~~~~~~yI~GESYgG---------~~inLkGi~iGng~~~p-~~~~~s~~~f~~~~g 221 (454)
+|.|..+..+.|-..+|+ ++.=+|-|=|| .+-.+.|.+---.=.|- ...-..|..|+-.-|
T Consensus 117 AA~D~Hri~~A~K~iY~~----kWISTG~SKGGmTa~y~rrFyP~DVD~tVaYVAP~~~~~~eD~~y~~Fl~~VG 187 (448)
T PF05576_consen 117 AASDQHRIVQAFKPIYPG----KWISTGGSKGGMTAVYYRRFYPDDVDGTVAYVAPNDVVNREDSRYDRFLEKVG 187 (448)
T ss_pred hhHHHHHHHHHHHhhccC----CceecCcCCCceeEEEEeeeCCCCCCeeeeeecccccCcccchhHHHHHHhcC
Confidence 999999999998777764 67779999999 23345555433222221 123345677766655
No 223
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=22.80 E-value=1.2e+02 Score=29.01 Aligned_cols=52 Identities=13% Similarity=0.202 Sum_probs=33.0
Q ss_pred ChHHhHHHHHHHHHHHHH-HCCC---CCCCCeEEEcccccc--------------cccCcceeeeecccc
Q 012876 153 GDQVTANDSYAFLIGWFK-RFPN---FKSHDFYIAGESYAD--------------SFINLKGFMIGNAVI 204 (454)
Q Consensus 153 ~~~~~A~~~~~fL~~f~~-~fp~---~~~~~~yI~GESYgG--------------~~inLkGi~iGng~~ 204 (454)
.+.+.+.++.++|.+=++ ..|. ---.++.|+|||=|| ..+++++++..+|+=
T Consensus 62 ~~~~~~~~vi~Wl~~~L~~~l~~~v~~D~s~l~l~GHSrGGk~Af~~al~~~~~~~~~~~~ali~lDPVd 131 (259)
T PF12740_consen 62 DEVASAAEVIDWLAKGLESKLPLGVKPDFSKLALAGHSRGGKVAFAMALGNASSSLDLRFSALILLDPVD 131 (259)
T ss_pred hhHHHHHHHHHHHHhcchhhccccccccccceEEeeeCCCCHHHHHHHhhhcccccccceeEEEEecccc
Confidence 344566666666554111 2220 112359999999999 146899999999885
No 224
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=22.62 E-value=1.1e+02 Score=28.82 Aligned_cols=52 Identities=19% Similarity=0.254 Sum_probs=33.4
Q ss_pred cceEEEeCCCccCCCCcCCCCCCcccChHHhHHHHHHHHHHHHHHCCCCCCCCeEEEcccccc
Q 012876 127 ANMLFLEAPVGVGFSYTNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAD 189 (454)
Q Consensus 127 anvlyIDqPvGtGfSy~~~~~~~~~~~~~~~A~~~~~fL~~f~~~fp~~~~~~~yI~GESYgG 189 (454)
..++=|+-| |-|=-+.+. ..+ +-++.|..+...|+- -+..+|+-++|+|+||
T Consensus 34 iel~avqlP-GR~~r~~ep---~~~-di~~Lad~la~el~~------~~~d~P~alfGHSmGa 85 (244)
T COG3208 34 IELLAVQLP-GRGDRFGEP---LLT-DIESLADELANELLP------PLLDAPFALFGHSMGA 85 (244)
T ss_pred hheeeecCC-CcccccCCc---ccc-cHHHHHHHHHHHhcc------ccCCCCeeecccchhH
Confidence 456778855 666333332 222 566666666655532 4567899999999999
No 225
>KOG4667 consensus Predicted esterase [Lipid transport and metabolism]
Probab=21.96 E-value=1.4e+02 Score=27.96 Aligned_cols=48 Identities=21% Similarity=0.293 Sum_probs=39.0
Q ss_pred CCeEEEEecCCCcccCchHHHHHHHHcCCCCccceeeceeCCeEeEEEEEeecCeEEEEEcCCccccccCChH
Q 012876 362 GLRIWVYSGDTDGRVPVTSTRYSINKMGLKIKEEWRAWFHKHQVAGWVETYEKGLTLVTVRGAGHQVPAFAPA 434 (454)
Q Consensus 362 ~~rVliy~Gd~D~i~~~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~Gy~~~~~~~Ltf~~V~gAGHmvP~dqP~ 434 (454)
..|||-.+|-.|-|||...+..+++.+. |=.+-+|.||-|---.+|-+
T Consensus 199 ~C~VLTvhGs~D~IVPve~AkefAk~i~-------------------------nH~L~iIEgADHnyt~~q~~ 246 (269)
T KOG4667|consen 199 QCRVLTVHGSEDEIVPVEDAKEFAKIIP-------------------------NHKLEIIEGADHNYTGHQSQ 246 (269)
T ss_pred cCceEEEeccCCceeechhHHHHHHhcc-------------------------CCceEEecCCCcCccchhhh
Confidence 5899999999999999999999988865 45567788888876555543
No 226
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=21.78 E-value=62 Score=31.35 Aligned_cols=62 Identities=23% Similarity=0.245 Sum_probs=43.1
Q ss_pred CCeEEEEecCCCcccCchHHHHHHHHcCCCCccceeeceeCCeEeEEEEEeecCeEEEEEcCCccccccCChHHHHHHHH
Q 012876 362 GLRIWVYSGDTDGRVPVTSTRYSINKMGLKIKEEWRAWFHKHQVAGWVETYEKGLTLVTVRGAGHQVPAFAPAQSLSLFT 441 (454)
Q Consensus 362 ~~rVliy~Gd~D~i~~~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~Gy~~~~~~~Ltf~~V~gAGHmvP~dqP~~a~~~i~ 441 (454)
+.|||+..|+.-.-..- +...-.+|+ +++-|++.|.++|=||-.+||+...+-|+
T Consensus 219 ~c~vLlvvG~~Sp~~~~--vv~~ns~Ld-----------------------p~~ttllkv~dcGglV~eEqP~klaea~~ 273 (283)
T PF03096_consen 219 GCPVLLVVGDNSPHVDD--VVEMNSKLD-----------------------PTKTTLLKVADCGGLVLEEQPGKLAEAFK 273 (283)
T ss_dssp CS-EEEEEETTSTTHHH--HHHHHHHS------------------------CCCEEEEEETT-TT-HHHH-HHHHHHHHH
T ss_pred CCCeEEEEecCCcchhh--HHHHHhhcC-----------------------cccceEEEecccCCcccccCcHHHHHHHH
Confidence 38999999998654332 233334443 11678999999999999999999999999
Q ss_pred HHHcCCC
Q 012876 442 KFLSAAT 448 (454)
Q Consensus 442 ~fl~~~~ 448 (454)
-|+.|..
T Consensus 274 lFlQG~G 280 (283)
T PF03096_consen 274 LFLQGMG 280 (283)
T ss_dssp HHHHHTT
T ss_pred HHHccCC
Confidence 9998864
No 227
>PF07849 DUF1641: Protein of unknown function (DUF1641); InterPro: IPR012440 Archaeal and bacterial hypothetical proteins are found in this family, with the region in question being approximately 40 residues long.
Probab=21.64 E-value=48 Score=22.03 Aligned_cols=18 Identities=28% Similarity=0.294 Sum_probs=15.1
Q ss_pred HHHhhhCcHHHHhHcccC
Q 012876 309 YVMKFFNREDVQRALHAN 326 (454)
Q Consensus 309 ~~~~ylN~~~V~~aL~v~ 326 (454)
.+..-|++||||++|++-
T Consensus 15 gl~~~l~DpdvqrgL~~l 32 (42)
T PF07849_consen 15 GLLRALRDPDVQRGLGFL 32 (42)
T ss_pred HHHHHHcCHHHHHHHHHH
Confidence 467789999999999864
No 228
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=21.54 E-value=1.6e+02 Score=30.23 Aligned_cols=63 Identities=14% Similarity=0.153 Sum_probs=43.0
Q ss_pred CCeEEEEecCCCcccCchHHHHHHHHc-CCCCccceeeceeCCeEeEEEEEeecCeEEEEEcCCccccccC---ChHHHH
Q 012876 362 GLRIWVYSGDTDGRVPVTSTRYSINKM-GLKIKEEWRAWFHKHQVAGWVETYEKGLTLVTVRGAGHQVPAF---APAQSL 437 (454)
Q Consensus 362 ~~rVliy~Gd~D~i~~~~Gt~~~i~~L-~w~~~~~~~~w~~~~~~~Gy~~~~~~~Ltf~~V~gAGHmvP~d---qP~~a~ 437 (454)
+.++|...|..|-||++..++...+-. +.+.. .=++..+.++||+--.- -++...
T Consensus 338 ~~pll~V~ge~D~I~p~~qt~aa~~l~~~~~s~---------------------~k~~~~~~~~GH~Gvf~G~r~~~~i~ 396 (406)
T TIGR01849 338 RVALLTVEGENDDISGLGQTKAALRLCTGIPED---------------------MKRHHLQPGVGHYGVFSGSRFREEIY 396 (406)
T ss_pred ccceEEEeccCCCcCCHHHhHHHHHHhhcCChh---------------------hceEeecCCCCeEEEeeChhhhhhhc
Confidence 388999999999999999999887753 11111 22356678899985433 334455
Q ss_pred HHHHHHHc
Q 012876 438 SLFTKFLS 445 (454)
Q Consensus 438 ~~i~~fl~ 445 (454)
-.|.+||.
T Consensus 397 P~i~~wl~ 404 (406)
T TIGR01849 397 PLVREFIR 404 (406)
T ss_pred hHHHHHHH
Confidence 66777764
No 229
>PTZ00333 triosephosphate isomerase; Provisional
Probab=20.99 E-value=1.8e+02 Score=27.67 Aligned_cols=49 Identities=20% Similarity=0.392 Sum_probs=33.0
Q ss_pred HHhHHHHHHHHHHHHHH-CCCCCCCCeEEEcccccc-----------cccCcceeeeecccccC
Q 012876 155 QVTANDSYAFLIGWFKR-FPNFKSHDFYIAGESYAD-----------SFINLKGFMIGNAVIND 206 (454)
Q Consensus 155 ~~~A~~~~~fL~~f~~~-fp~~~~~~~yI~GESYgG-----------~~inLkGi~iGng~~~p 206 (454)
.+.++++..++++++.. +.......+-|. ||| ...++.|+.||.+.+++
T Consensus 182 ~e~i~~~~~~IR~~l~~~~~~~~~~~~~IL---YGGSV~~~N~~~l~~~~~vDG~LvG~asl~~ 242 (255)
T PTZ00333 182 PEQAQEVHAFIRKWLAEKVGADVAEATRII---YGGSVNEKNCKELIKQPDIDGFLVGGASLKP 242 (255)
T ss_pred HHHHHHHHHHHHHHHHHhhcccccccceEE---EcCCCCHHHHHHHhcCCCCCEEEEehHhhhh
Confidence 34688888889888763 332222233333 888 46689999999999873
No 230
>PF00809 Pterin_bind: Pterin binding enzyme This Prosite entry is a subset of the Pfam family; InterPro: IPR000489 The ~250-residue pterin-binding domain has been shown to adopt a (beta/alpha)8 barrel fold, which has the overall shape of a distorted cylinder. It has eight alpha-helices stacked around the outside of an inner cylinder of parallel beta-strands. The pterin ring binds at the bottom of the (beta/alpha;)8 barrel in a polar cup-like region that is relatively solvent exposed and fairly negatively charged. The pterin ring is partially buried within the (beta/alpha)8 barrel. The pterin binding residues are highly conserved and include aspartate and asparagine residues located at the C terminus of the beta-strands of the barrel, which are predicted to form hydrogen bonds with the nitrogen and oxygen atoms of the pterin ring [, , ]. Some proteins known to contain a pterin-binding domain are listed below: Prokaryotic and eukaryotic B12-dependent methionine synthase (MetH) (2.1.1.13 from EC), a large, modular protein that catalyzes the transfer of a methyl group from methyltetrahydrofolate (CH3-H4folate) to Hcy to form methionine, using cobalamin as an intermediate methyl carrier. Prokaryotic and eukaryotic dihydropteroate synthase (DHPS) (2.5.1.15 from EC). It catalyzes the condensation of para-aminobenzoic acid (pABA) with 7,8- dihydropterin-pyrophosphate (DHPPP), eliminating pyrophosphate to form 7,8- dihydropteroate which is subsequently converted to tetrahydrofolate. Moorella thermoacetica 5-methyltetrahydrofolate corrinoid/iron sulphur protein methyltransferase (MeTr). It transfers the N5-methyl group from CH3-H4folate to a cob(I)amide centre in another protein, the corrinoid iron sulphur protein. ; GO: 0042558 pteridine-containing compound metabolic process; PDB: 2VP8_B 2BMB_A 2Y5S_B 2Y5J_A 3BOF_B 1Q7Q_B 1Q85_B 1Q7Z_A 1Q7M_A 1Q8A_B ....
Probab=20.77 E-value=1.5e+02 Score=27.22 Aligned_cols=30 Identities=20% Similarity=0.329 Sum_probs=19.9
Q ss_pred eEEEeCCCccCCCCcCCCCCCcccChHHhHHHHHHHHHHHHHH
Q 012876 129 MLFLEAPVGVGFSYTNNSEDLHKLGDQVTANDSYAFLIGWFKR 171 (454)
Q Consensus 129 vlyIDqPvGtGfSy~~~~~~~~~~~~~~~A~~~~~fL~~f~~~ 171 (454)
=|+|| | |+||+ .+.+.+..+.+.|+.|-..
T Consensus 165 ~Ii~D-P-gigf~-----------~~~~~~~~~l~~i~~~~~~ 194 (210)
T PF00809_consen 165 RIILD-P-GIGFG-----------KDPEQNLELLRNIEELKEL 194 (210)
T ss_dssp GEEEE-T-TTTSS-----------TTHHHHHHHHHTHHHHHTT
T ss_pred HEeec-c-ccCcC-----------CCHHHHHHHHHHHHHHHHh
Confidence 39999 5 89993 2344566666667766544
No 231
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=20.45 E-value=1.5e+02 Score=29.22 Aligned_cols=56 Identities=16% Similarity=0.107 Sum_probs=35.5
Q ss_pred CCeEEEEecCCCcccCchHHHHHHHHcCCCCccceeeceeCCeEeEEEEEeecCeEEEEEcCCccccccCC-hHHHHHHH
Q 012876 362 GLRIWVYSGDTDGRVPVTSTRYSINKMGLKIKEEWRAWFHKHQVAGWVETYEKGLTLVTVRGAGHQVPAFA-PAQSLSLF 440 (454)
Q Consensus 362 ~~rVliy~Gd~D~i~~~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~Gy~~~~~~~Ltf~~V~gAGHmvP~dq-P~~a~~~i 440 (454)
..+|++-.|-.|.+||..+.-+..++|+ + .=........||..+.+. -+..++.+
T Consensus 262 ~~pvl~~~gl~D~~cPP~t~fA~yN~i~--~----------------------~K~l~vyp~~~He~~~~~~~~~~~~~l 317 (320)
T PF05448_consen 262 KCPVLFSVGLQDPVCPPSTQFAAYNAIP--G----------------------PKELVVYPEYGHEYGPEFQEDKQLNFL 317 (320)
T ss_dssp -SEEEEEEETT-SSS-HHHHHHHHCC----S----------------------SEEEEEETT--SSTTHHHHHHHHHHHH
T ss_pred CCCEEEEEecCCCCCCchhHHHHHhccC--C----------------------CeeEEeccCcCCCchhhHHHHHHHHHH
Confidence 6899999999999999999888888764 1 123366778899886554 55555444
Q ss_pred H
Q 012876 441 T 441 (454)
Q Consensus 441 ~ 441 (454)
+
T Consensus 318 ~ 318 (320)
T PF05448_consen 318 K 318 (320)
T ss_dssp H
T ss_pred h
Confidence 3
No 232
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=20.32 E-value=3.1e+02 Score=28.19 Aligned_cols=67 Identities=19% Similarity=0.277 Sum_probs=43.5
Q ss_pred HHHHHhcCCeEEEEecCCCcccCchHHHHHHHHcCCCCccceeeceeCCeEeEEEEEeecCeEEEEEcCCcccc-----c
Q 012876 355 IQKLLNAGLRIWVYSGDTDGRVPVTSTRYSINKMGLKIKEEWRAWFHKHQVAGWVETYEKGLTLVTVRGAGHQV-----P 429 (454)
Q Consensus 355 l~~lL~~~~rVliy~Gd~D~i~~~~Gt~~~i~~L~w~~~~~~~~w~~~~~~~Gy~~~~~~~Ltf~~V~gAGHmv-----P 429 (454)
-..|-+++-|+|+.+|+.|....-. ..|.. | .++--..++.|+.|.+ |
T Consensus 344 ~~Wvr~~~~rmlFVYG~nDPW~A~~--------f~l~~--------------g-----~~ds~v~~~PggnHga~I~~L~ 396 (448)
T PF05576_consen 344 DRWVRNNGPRMLFVYGENDPWSAEP--------FRLGK--------------G-----KRDSYVFTAPGGNHGARIAGLP 396 (448)
T ss_pred HHHHHhCCCeEEEEeCCCCCcccCc--------cccCC--------------C-----CcceEEEEcCCCcccccccCCC
Confidence 3344456899999999999654322 11110 0 0134446788999984 5
Q ss_pred cCChHHHHHHHHHHHcCCC
Q 012876 430 AFAPAQSLSLFTKFLSAAT 448 (454)
Q Consensus 430 ~dqP~~a~~~i~~fl~~~~ 448 (454)
.++-+.+.++|++|..-.+
T Consensus 397 ~~~r~~a~a~l~~WaGv~~ 415 (448)
T PF05576_consen 397 EAERAEATARLRRWAGVAP 415 (448)
T ss_pred HHHHHHHHHHHHHHcCCCc
Confidence 6677789999999987543
Done!