Your job contains 1 sequence.
>012877
MIVPLEQKLDMLWSFIKAHLNSKILVFLTSCKQVKYVFEAFKKLRPGIPLMCLYGRMKQD
RRMAIYAQFCEKRSVLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYNSG
GRSVLFLTPTEMKMLEKLREAKIPIHFTKANTKRLQPVSGLLAALLVKYPDMQHRAQKAF
ITYLRSVHIQKDKEVFDVTKLSIDEFSASLGLPMTPKIRFLNQKKGKMVPVKPVLDNAEK
EDKLMISREKLLPDNFTEENVDRDILETKDIEDEGKADLLEDVMRATRVKKNKKLKINVH
RPLGTRLVFDEECNTVPPLAMLADTKNANVSLDQDQKTEYYKKIREELKRADKEDKLLDR
QRRREKRIKQKMKRKRGGLGDDDDEEDEDNASDKDEESMERGRRKKAKIYFDSDSDNDND
ERKQNKDDNGPNIDSISLAEQEALALKLLNSMHS
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 012877
(454 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2160225 - symbol:AT5G54910 species:3702 "Arabi... 1066 8.1e-108 1
ASPGD|ASPL0000061778 - symbol:AN0589 species:162425 "Emer... 601 4.8e-64 2
UNIPROTKB|E9PIF2 - symbol:DDX10 "Probable ATP-dependent R... 609 2.9e-62 2
UNIPROTKB|Q13206 - symbol:DDX10 "Probable ATP-dependent R... 609 6.3e-62 2
UNIPROTKB|F1P0I3 - symbol:DDX10 "Probable ATP-dependent R... 596 1.9e-61 2
UNIPROTKB|Q5ZJF6 - symbol:DDX10 "Probable ATP-dependent R... 596 1.9e-61 2
POMBASE|SPAC1093.05 - symbol:SPAC1093.05 "ATP-dependent R... 574 4.2e-61 2
DICTYBASE|DDB_G0284017 - symbol:ddx10 "DEAD/DEAH box heli... 580 1.2e-60 3
CGD|CAL0004182 - symbol:HCA4 species:5476 "Candida albica... 570 2.0e-59 2
MGI|MGI:1924841 - symbol:Ddx10 "DEAD (Asp-Glu-Ala-Asp) bo... 586 2.1e-59 2
FB|FBgn0030855 - symbol:CG5800 species:7227 "Drosophila m... 583 2.9e-59 2
RGD|1308990 - symbol:Ddx10 "DEAD (Asp-Glu-Ala-Asp) box po... 587 1.1e-58 2
ZFIN|ZDB-GENE-071022-2 - symbol:ddx10 "DEAD (Asp-Glu-Ala-... 584 2.0e-58 2
SGD|S000003570 - symbol:HCA4 "DEAD box RNA helicase" spec... 548 7.8e-58 2
UNIPROTKB|Q08DT0 - symbol:DDX10 "Uncharacterized protein"... 597 8.0e-58 1
UNIPROTKB|E2RC35 - symbol:DDX10 "Uncharacterized protein"... 591 3.6e-57 1
UNIPROTKB|A4RGU2 - symbol:DBP4 "ATP-dependent RNA helicas... 516 1.4e-56 3
WB|WBGene00021277 - symbol:Y23H5B.6 species:6239 "Caenorh... 551 3.0e-53 1
UNIPROTKB|I3L840 - symbol:DDX18 "Uncharacterized protein"... 400 1.1e-36 1
UNIPROTKB|E2RFA3 - symbol:DDX18 "Uncharacterized protein"... 400 1.1e-36 1
UNIPROTKB|F1RY13 - symbol:DDX18 "Uncharacterized protein"... 400 1.2e-36 1
UNIPROTKB|I3L7B7 - symbol:DDX18 "Uncharacterized protein"... 400 1.4e-36 1
UNIPROTKB|F1N533 - symbol:DDX18 "Uncharacterized protein"... 399 1.5e-36 1
UNIPROTKB|F1MSX0 - symbol:F1MSX0 "Uncharacterized protein... 399 1.5e-36 1
SGD|S000004903 - symbol:HAS1 "ATP-dependent RNA helicase"... 388 5.7e-36 1
CGD|CAL0003050 - symbol:HAS1 species:5476 "Candida albica... 387 8.7e-36 1
UNIPROTKB|Q5AK59 - symbol:HAS1 "ATP-dependent RNA helicas... 387 8.7e-36 1
POMBASE|SPAC1F7.02c - symbol:has1 "ATP-dependent RNA heli... 385 2.0e-35 1
ASPGD|ASPL0000044206 - symbol:AN1949 species:162425 "Emer... 385 3.1e-35 1
UNIPROTKB|Q9NVP1 - symbol:DDX18 "ATP-dependent RNA helica... 387 3.1e-35 1
MGI|MGI:1914192 - symbol:Ddx18 "DEAD (Asp-Glu-Ala-Asp) bo... 386 3.8e-35 1
UNIPROTKB|D4A824 - symbol:Ddx18 "Protein Ddx18" species:1... 386 3.8e-35 1
RGD|1549712 - symbol:Ddx18 "DEAD (Asp-Glu-Ala-Asp) box po... 386 4.1e-35 1
WB|WBGene00015232 - symbol:B0511.6 species:6239 "Caenorha... 373 2.5e-34 1
UNIPROTKB|F1NEQ3 - symbol:DDX18 "Uncharacterized protein"... 376 4.7e-34 1
ZFIN|ZDB-GENE-030131-9685 - symbol:ddx18 "DEAD (Asp-Glu-A... 375 5.8e-34 1
FB|FBgn0025140 - symbol:pit "pitchoune" species:7227 "Dro... 375 6.9e-34 1
TAIR|locus:2086909 - symbol:AT3G18600 species:3702 "Arabi... 366 2.6e-33 1
DICTYBASE|DDB_G0282741 - symbol:ddx18 "DEAD/DEAH box heli... 365 5.0e-33 1
TAIR|locus:2152099 - symbol:AT5G65900 species:3702 "Arabi... 345 1.0e-30 1
GENEDB_PFALCIPARUM|PFF1500c - symbol:PFF1500c "DEAD/DEAH ... 330 3.6e-29 1
UNIPROTKB|C6KTE4 - symbol:PFF1500c "DEAD/DEAH box ATP-dep... 330 3.6e-29 1
UNIPROTKB|Q8NHQ9 - symbol:DDX55 "ATP-dependent RNA helica... 326 1.0e-28 1
UNIPROTKB|F1MW45 - symbol:DDX55 "ATP-dependent RNA helica... 323 2.1e-28 1
UNIPROTKB|Q2NL08 - symbol:DDX55 "ATP-dependent RNA helica... 323 2.1e-28 1
UNIPROTKB|F1RFL5 - symbol:DDX55 "Uncharacterized protein"... 319 5.8e-28 1
UNIPROTKB|F1P8J6 - symbol:DDX55 "Uncharacterized protein"... 316 1.2e-27 1
UNIPROTKB|F6XWM4 - symbol:DDX55 "Uncharacterized protein"... 316 2.2e-27 1
DICTYBASE|DDB_G0291588 - symbol:ddx55 "DEAD/DEAH box heli... 296 7.1e-27 2
TAIR|locus:2825324 - symbol:AT1G71370 species:3702 "Arabi... 293 3.8e-26 2
UNIPROTKB|F1NJA0 - symbol:DDX55 "ATP-dependent RNA helica... 302 4.0e-26 1
UNIPROTKB|Q5ZLN8 - symbol:DDX55 "ATP-dependent RNA helica... 302 4.0e-26 1
MGI|MGI:1915098 - symbol:Ddx55 "DEAD (Asp-Glu-Ala-Asp) bo... 300 6.9e-26 1
RGD|2324094 - symbol:Ddx55 "DEAD (Asp-Glu-Ala-Asp) box po... 299 8.9e-26 1
UNIPROTKB|H7C452 - symbol:DDX18 "ATP-dependent RNA helica... 285 4.6e-25 1
UNIPROTKB|E2R316 - symbol:DDX55 "Uncharacterized protein"... 286 1.3e-23 1
ZFIN|ZDB-GENE-021212-1 - symbol:ddx55 "DEAD (Asp-Glu-Ala-... 288 1.4e-23 1
TAIR|locus:2153564 - symbol:AT5G05450 species:3702 "Arabi... 261 5.5e-20 1
UNIPROTKB|I3LGI1 - symbol:I3LGI1 "Uncharacterized protein... 236 1.8e-19 1
FB|FBgn0037561 - symbol:CG9630 species:7227 "Drosophila m... 249 2.8e-18 2
WB|WBGene00013983 - symbol:ZK512.2 species:6239 "Caenorha... 244 5.3e-18 1
ZFIN|ZDB-GENE-030131-3973 - symbol:ddx31 "DEAD (Asp-Glu-A... 243 1.1e-17 1
POMBASE|SPBC24C6.02 - symbol:SPBC24C6.02 "ATP-dependent R... 231 1.1e-16 2
TAIR|locus:2064844 - symbol:AT2G40700 species:3702 "Arabi... 209 3.8e-16 2
UNIPROTKB|F1N5H8 - symbol:DDX31 "Uncharacterized protein"... 217 7.3e-16 2
UNIPROTKB|F1S0U0 - symbol:DDX31 "Uncharacterized protein"... 219 2.2e-15 2
TAIR|locus:2159527 - symbol:STRS2 "STRESS RESPONSE SUPPRE... 221 2.2e-15 1
UNIPROTKB|F8WAJ0 - symbol:DDX31 "Probable ATP-dependent R... 219 6.1e-15 1
UNIPROTKB|Q9H8H2 - symbol:DDX31 "Probable ATP-dependent R... 219 7.9e-15 1
UNIPROTKB|F1NM06 - symbol:DDX31 "Uncharacterized protein"... 217 9.4e-15 1
POMBASE|SPBC21H7.04 - symbol:dbp7 "ATP-dependent RNA heli... 163 9.9e-15 3
RGD|1304895 - symbol:Ddx31 "DEAD (Asp-Glu-Ala-Asp) box po... 216 1.2e-14 1
ZFIN|ZDB-GENE-050522-359 - symbol:zgc:112350 "zgc:112350"... 212 1.9e-14 1
GENEDB_PFALCIPARUM|PF14_0437 - symbol:PF14_0437 "helicase... 212 2.0e-14 1
UNIPROTKB|Q8IL13 - symbol:PF14_0437 "Helicase, putative" ... 212 2.0e-14 1
UNIPROTKB|F5H5U2 - symbol:DDX55 "ATP-dependent RNA helica... 141 2.8e-14 2
SGD|S000002602 - symbol:MSS116 "DEAD-box protein involved... 212 3.2e-14 1
ASPGD|ASPL0000034540 - symbol:spb4 species:162425 "Emeric... 215 4.5e-14 2
WB|WBGene00012059 - symbol:T26G10.1 species:6239 "Caenorh... 202 2.4e-13 1
ASPGD|ASPL0000028276 - symbol:AN5623 species:162425 "Emer... 202 3.2e-13 1
SGD|S000001732 - symbol:DBP7 "Putative ATP-dependent RNA ... 164 4.2e-13 2
ASPGD|ASPL0000042587 - symbol:AN1750 species:162425 "Emer... 202 5.5e-13 1
TAIR|locus:2159517 - symbol:PDE340 "PIGMENT DEFECTIVE 340... 201 8.2e-13 1
MGI|MGI:1915005 - symbol:Ddx47 "DEAD (Asp-Glu-Ala-Asp) bo... 196 9.6e-13 1
UNIPROTKB|G3V727 - symbol:Ddx47 "Protein Ddx47" species:1... 196 9.6e-13 1
UNIPROTKB|Q29S22 - symbol:DDX47 "Probable ATP-dependent R... 196 9.7e-13 1
UNIPROTKB|E2RN03 - symbol:DDX47 "Uncharacterized protein"... 196 1.1e-12 1
UNIPROTKB|Q5ZLB0 - symbol:DDX47 "Uncharacterized protein"... 195 1.2e-12 1
DICTYBASE|DDB_G0271708 - symbol:ddx31 "DEAD/DEAH box heli... 192 2.7e-12 2
UNIPROTKB|Q9H0S4 - symbol:DDX47 "Probable ATP-dependent R... 191 3.5e-12 1
DICTYBASE|DDB_G0270396 - symbol:ddx49 "DEAD/DEAH box heli... 191 3.7e-12 2
TAIR|locus:2032910 - symbol:RH36 "RNA helicase 36" specie... 184 3.9e-12 2
UNIPROTKB|Q81JK1 - symbol:BAS5307 "ATP-dependent RNA heli... 187 4.2e-12 2
TIGR_CMR|BA_5703 - symbol:BA_5703 "ATP-dependent RNA heli... 187 4.2e-12 2
TAIR|locus:2054688 - symbol:AT2G07750 species:3702 "Arabi... 193 6.3e-12 1
FB|FBgn0032919 - symbol:CG9253 species:7227 "Drosophila m... 188 9.7e-12 1
CGD|CAL0000625 - symbol:SPB4 species:5476 "Candida albica... 189 1.1e-11 2
UNIPROTKB|E1C2R8 - symbol:DDX17 "Uncharacterized protein"... 187 1.2e-11 1
UNIPROTKB|C9JMU5 - symbol:DDX17 "Probable ATP-dependent R... 188 1.5e-11 1
ZFIN|ZDB-GENE-030131-18 - symbol:si:dkey-156n14.5 "si:dke... 188 1.6e-11 1
WARNING: Descriptions of 625 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2160225 [details] [associations]
symbol:AT5G54910 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0005730
"nucleolus" evidence=IDA] [GO:0006606 "protein import into nucleus"
evidence=RCA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0005730 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
EMBL:AB005232 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K14776 InterPro:IPR025313 Pfam:PF13959 HOGENOM:HOG000268801
IPI:IPI00527032 RefSeq:NP_200302.1 UniGene:At.29471
ProteinModelPortal:Q9FFT9 SMR:Q9FFT9 STRING:Q9FFT9 PaxDb:Q9FFT9
PRIDE:Q9FFT9 EnsemblPlants:AT5G54910.1 GeneID:835582
KEGG:ath:AT5G54910 GeneFarm:988 TAIR:At5g54910 InParanoid:Q9FFT9
OMA:PEDGVGC PhylomeDB:Q9FFT9 ProtClustDB:CLSN2686959
Genevestigator:Q9FFT9 GermOnline:AT5G54910 Uniprot:Q9FFT9
Length = 739
Score = 1066 (380.3 bits), Expect = 8.1e-108, P = 8.1e-108
Identities = 212/357 (59%), Positives = 280/357 (78%)
Query: 1 MIVPLEQKLDMLWSFIKAHLNSKILVFLTSCKQVKYVFEAFKKLRPGIPLMCLYGRMKQD 60
MIVP+E+KLDMLWSFIK HLNS+ILVFL++ KQVK+V EAF KLRPGIPL L+G+M Q+
Sbjct: 296 MIVPVEKKLDMLWSFIKTHLNSRILVFLSTKKQVKFVHEAFNKLRPGIPLKSLHGKMSQE 355
Query: 61 RRMAIYAQFCEKRSVLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYNSG 120
+RM +Y+QF E++SVLFCTDV +RGLDF+KAVDWVVQVDCPEDVASYIHRVGRTAR+ +
Sbjct: 356 KRMGVYSQFIERQSVLFCTDVLARGLDFDKAVDWVVQVDCPEDVASYIHRVGRTARFYTQ 415
Query: 121 GRSVLFLTPTEMKMLEKLREAKIPIHFTKANTKRLQPVSGLLAALLVKYPDMQHRAQKAF 180
G+S+LFLTP+E KM+EKL+EAK+PI KAN ++LQ VS LLAALLVKYPD+Q AQ+AF
Sbjct: 416 GKSLLFLTPSEEKMIEKLQEAKVPIKLIKANNQKLQEVSRLLAALLVKYPDLQGVAQRAF 475
Query: 181 ITYLRSVHIQKDKEVFDVTKLSIDEFSASLGLPMTPKIRFLNQK-KGKMVPVKPV---LD 236
ITYLRS+H ++DKE+FDV+KLSI+ FSASLGLPMTP+IRF N K K K V + ++
Sbjct: 476 ITYLRSIHKRRDKEIFDVSKLSIENFSASLGLPMTPRIRFTNLKTKKKGVYESSIAMEIE 535
Query: 237 NAEKEDKLMISREKLLPDNFTEENVD-RDILETKDIEDEGKADLLEDVMRATRVKKNKKL 295
NA++ + ++ ++ LL ++ EE+ + E K +E K + E ++ RV KNKKL
Sbjct: 536 NAQEYEAPLVVKKDLLGEDLEEEDFALKPRKEGKVVEKSTKEE--EVLIPGNRVLKNKKL 593
Query: 296 KINVHRPLGTRLVFDEECNTVPPLAMLADTKNANVSLDQDQKTEYYKKIREELKRAD 352
KIN+HRP G+R+V DEE N++ PLA +A V+LD+++ +YYKK+ E+++AD
Sbjct: 594 KINLHRPFGSRVVLDEEGNSLAPLASVAAEAGTEVALDEERMNDYYKKVGAEMRKAD 650
>ASPGD|ASPL0000061778 [details] [associations]
symbol:AN0589 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
EMBL:BN001308 EMBL:AACD01000007 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K14776
InterPro:IPR025313 Pfam:PF13959 RefSeq:XP_658193.1
ProteinModelPortal:Q5BFU1 SMR:Q5BFU1 STRING:Q5BFU1
EnsemblFungi:CADANIAT00002085 GeneID:2876356 KEGG:ani:AN0589.2
HOGENOM:HOG000268801 OMA:MFERKNQ OrthoDB:EOG4R53B0 Uniprot:Q5BFU1
Length = 812
Score = 601 (216.6 bits), Expect = 4.8e-64, Sum P(2) = 4.8e-64
Identities = 113/223 (50%), Positives = 166/223 (74%)
Query: 1 MIVPLEQKLDMLWSFIKAHLNSKILVFLTSCKQVKYVFEAFKKLRPGIPLMCLYGRMKQD 60
++ PL QKLD LWSFI+++L SK +VF++S KQV++V+E+F+ ++PGIPL+ L+GR KQ
Sbjct: 272 VVTPLPQKLDTLWSFIRSNLKSKTIVFMSSGKQVRFVYESFRHMQPGIPLLHLHGRQKQG 331
Query: 61 RRMAIYAQFCE-KRSVLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYNS 119
R+ I +F + + +VLF TDVA+RGLDF AVDWV+Q+DCPED +YIHRVGRTARY
Sbjct: 332 GRLDITTRFSQAQHAVLFSTDVAARGLDF-PAVDWVIQLDCPEDADTYIHRVGRTARYER 390
Query: 120 GGRSVLFLTPTEMK-MLEKLREAKIPIHFTKANTKRLQPVSGLLAALLVKYPDMQHRAQK 178
GR+VLFL P+E K ML +L + ++ + + Q + L + K P++++ QK
Sbjct: 391 DGRAVLFLDPSEEKGMLRRLEQKRVTVERINVRANKQQSIKNQLQNMCFKDPELKYLGQK 450
Query: 179 AFITYLRSVHIQKDKEVFDVTKLSIDEFSASLGLPMTPKIRFL 221
AFI+Y++SV+IQKDKE F++ +L +D+F+ASLGLP P+I+F+
Sbjct: 451 AFISYVKSVYIQKDKETFNLKELKLDDFAASLGLPGAPRIKFI 493
Score = 70 (29.7 bits), Expect = 4.8e-64, Sum P(2) = 4.8e-64
Identities = 28/115 (24%), Positives = 53/115 (46%)
Query: 242 DKLMISREKLLPDNFTEENVDRDILETKD---IEDEGKADLLEDVMRATRVKKNKKLKIN 298
D + + + D+ ++ D E KD ++ K L+ D R ++ K+KK K+
Sbjct: 589 DDALHAEDSSASDSDASDSEAEDHTEKKDPKVVKISDKDTLVIDSKRREKLLKSKK-KLL 647
Query: 299 VHRPLGTRLVFDEECNTVPPLAMLADTKNANVSLD-QDQKTEYYKKIREELKRAD 352
+ GT+LV+D+E N L + D + D ++Q+ + + +RAD
Sbjct: 648 KFKGKGTKLVYDDEGNA-HELYEMEDEEAFKARGDAKEQQARFLAEEAARTQRAD 701
Score = 42 (19.8 bits), Expect = 4.2e-61, Sum P(2) = 4.2e-61
Identities = 10/31 (32%), Positives = 16/31 (51%)
Query: 400 ERGRRKKAKIYF---DSDSDNDNDERKQNKD 427
ER +A Y D +SD + ++KQ K+
Sbjct: 500 ERKNASRATAYLTSGDEESDEEGGKKKQPKE 530
Score = 39 (18.8 bits), Expect = 8.8e-61, Sum P(2) = 8.8e-61
Identities = 8/25 (32%), Positives = 13/25 (52%)
Query: 413 SDSDNDNDERKQNKDDNGPNIDSIS 437
SDSD + E + + + P + IS
Sbjct: 600 SDSDASDSEAEDHTEKKDPKVVKIS 624
Score = 38 (18.4 bits), Expect = 1.1e-60, Sum P(2) = 1.1e-60
Identities = 9/19 (47%), Positives = 15/19 (78%)
Query: 234 VLDNAEKEDKLMISREKLL 252
V+D+ +E KL+ S++KLL
Sbjct: 630 VIDSKRRE-KLLKSKKKLL 647
>UNIPROTKB|E9PIF2 [details] [associations]
symbol:DDX10 "Probable ATP-dependent RNA helicase DDX10"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313
Pfam:PF13959 HGNC:HGNC:2735 ChiTaRS:DDX10 EMBL:AP002453
EMBL:AP003027 EMBL:AP003387 IPI:IPI00982941
ProteinModelPortal:E9PIF2 SMR:E9PIF2 Ensembl:ENST00000526794
UCSC:uc001pkl.1 ArrayExpress:E9PIF2 Bgee:E9PIF2 Uniprot:E9PIF2
Length = 835
Score = 609 (219.4 bits), Expect = 2.9e-62, Sum P(2) = 2.9e-62
Identities = 118/260 (45%), Positives = 183/260 (70%)
Query: 1 MIVPLEQKLDMLWSFIKAHLNSKILVFLTSCKQVKYVFEAFKKLRPGIPLMCLYGRMKQD 60
++ L+QK+ +L+SF+++HL K +VF +SCK+V+Y++ F +LRPG+ ++ L+GR +Q
Sbjct: 293 IVCELQQKISVLYSFLRSHLKKKSIVFFSSCKEVQYLYRVFCRLRPGVSILALHGRQQQM 352
Query: 61 RRMAIYAQFCEKRS-VLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYNS 119
RRM +Y +F KR+ VLF TD+A+RGLDF AV+WV+Q DCPED +YIHR GRTARY
Sbjct: 353 RRMEVYNEFVRKRAAVLFATDIAARGLDF-PAVNWVLQFDCPEDANTYIHRAGRTARYKE 411
Query: 120 GGRSVLFLTPTEMKMLEKLREAKIPIHFTKANTKRLQPVSGLLAALLVKYPDMQHRAQKA 179
G ++L L P+E M+++L + K+P+ K N ++L V L ++L + D++ RAQ+
Sbjct: 412 DGEALLILLPSEKAMVQQLLQKKVPVKEIKINPEKLIDVQKKLESILAQDQDLKERAQRC 471
Query: 180 FITYLRSVHIQKDKEVFDVTKLSIDEFSASLGLPMTPKIRFLNQKKGKMVPVKPVLDNAE 239
F++Y+RSV++ KDKEVFDV+KL I E++ SLGL + P++RFL QK K P K ++ +
Sbjct: 472 FVSYVRSVYLMKDKEVFDVSKLPIPEYALSLGLAVAPRVRFL-QKMQKQ-PTKELVRS-- 527
Query: 240 KEDKLMISREKLLPDNFTEE 259
+ DK++ R L ++ EE
Sbjct: 528 QADKVIEPRAPSLTNDEVEE 547
Score = 45 (20.9 bits), Expect = 2.9e-62, Sum P(2) = 2.9e-62
Identities = 7/30 (23%), Positives = 18/30 (60%)
Query: 399 MERGRRKKAKIYFDSDSDNDNDERKQNKDD 428
+++G ++ D+D N+E+++ +DD
Sbjct: 559 LQKGGKRLEGTEHRQDNDTGNEEQEEEEDD 588
>UNIPROTKB|Q13206 [details] [associations]
symbol:DDX10 "Probable ATP-dependent RNA helicase DDX10"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003724 "RNA helicase
activity" evidence=TAS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:CH471065
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014
PROSITE:PS51195 KO:K14776 InterPro:IPR025313 Pfam:PF13959
HOGENOM:HOG000268801 CTD:1662 HOVERGEN:HBG102756 OrthoDB:EOG4BK536
EMBL:U28042 EMBL:AB040537 EMBL:AK315216 EMBL:BC091521 EMBL:BC093654
EMBL:BC093656 IPI:IPI00297900 RefSeq:NP_004389.2 UniGene:Hs.591931
PDB:2PL3 PDBsum:2PL3 ProteinModelPortal:Q13206 SMR:Q13206
IntAct:Q13206 STRING:Q13206 PhosphoSite:Q13206 DMDM:76803554
SWISS-2DPAGE:Q13206 PaxDb:Q13206 PeptideAtlas:Q13206 PRIDE:Q13206
Ensembl:ENST00000322536 GeneID:1662 KEGG:hsa:1662 UCSC:uc001pkm.3
GeneCards:GC11P108569 HGNC:HGNC:2735 HPA:HPA004691 MIM:601235
neXtProt:NX_Q13206 PharmGKB:PA27200 InParanoid:Q13206 OMA:ADKVIEP
ChiTaRS:DDX10 EvolutionaryTrace:Q13206 GenomeRNAi:1662 NextBio:6838
ArrayExpress:Q13206 Bgee:Q13206 CleanEx:HS_DDX10
Genevestigator:Q13206 GermOnline:ENSG00000178105 Uniprot:Q13206
Length = 875
Score = 609 (219.4 bits), Expect = 6.3e-62, Sum P(2) = 6.3e-62
Identities = 118/260 (45%), Positives = 183/260 (70%)
Query: 1 MIVPLEQKLDMLWSFIKAHLNSKILVFLTSCKQVKYVFEAFKKLRPGIPLMCLYGRMKQD 60
++ L+QK+ +L+SF+++HL K +VF +SCK+V+Y++ F +LRPG+ ++ L+GR +Q
Sbjct: 293 IVCELQQKISVLYSFLRSHLKKKSIVFFSSCKEVQYLYRVFCRLRPGVSILALHGRQQQM 352
Query: 61 RRMAIYAQFCEKRS-VLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYNS 119
RRM +Y +F KR+ VLF TD+A+RGLDF AV+WV+Q DCPED +YIHR GRTARY
Sbjct: 353 RRMEVYNEFVRKRAAVLFATDIAARGLDF-PAVNWVLQFDCPEDANTYIHRAGRTARYKE 411
Query: 120 GGRSVLFLTPTEMKMLEKLREAKIPIHFTKANTKRLQPVSGLLAALLVKYPDMQHRAQKA 179
G ++L L P+E M+++L + K+P+ K N ++L V L ++L + D++ RAQ+
Sbjct: 412 DGEALLILLPSEKAMVQQLLQKKVPVKEIKINPEKLIDVQKKLESILAQDQDLKERAQRC 471
Query: 180 FITYLRSVHIQKDKEVFDVTKLSIDEFSASLGLPMTPKIRFLNQKKGKMVPVKPVLDNAE 239
F++Y+RSV++ KDKEVFDV+KL I E++ SLGL + P++RFL QK K P K ++ +
Sbjct: 472 FVSYVRSVYLMKDKEVFDVSKLPIPEYALSLGLAVAPRVRFL-QKMQKQ-PTKELVRS-- 527
Query: 240 KEDKLMISREKLLPDNFTEE 259
+ DK++ R L ++ EE
Sbjct: 528 QADKVIEPRAPSLTNDEVEE 547
Score = 45 (20.9 bits), Expect = 6.3e-62, Sum P(2) = 6.3e-62
Identities = 7/30 (23%), Positives = 18/30 (60%)
Query: 399 MERGRRKKAKIYFDSDSDNDNDERKQNKDD 428
+++G ++ D+D N+E+++ +DD
Sbjct: 559 LQKGGKRLEGTEHRQDNDTGNEEQEEEEDD 588
>UNIPROTKB|F1P0I3 [details] [associations]
symbol:DDX10 "Probable ATP-dependent RNA helicase DDX10"
species:9031 "Gallus gallus" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313
Pfam:PF13959 GeneTree:ENSGT00550000074980 IPI:IPI00595697
OMA:ADKVIEP EMBL:AADN02005060 Ensembl:ENSGALT00000027709
Uniprot:F1P0I3
Length = 875
Score = 596 (214.9 bits), Expect = 1.9e-61, Sum P(2) = 1.9e-61
Identities = 111/244 (45%), Positives = 174/244 (71%)
Query: 1 MIVPLEQKLDMLWSFIKAHLNSKILVFLTSCKQVKYVFEAFKKLRPGIPLMCLYGRMKQD 60
++ L+ K+++L+SF+++HL K +VF SCK+V+Y+F F KL+PG+P++ L+G+ +Q
Sbjct: 297 IVCELQHKINVLYSFLRSHLKKKSIVFFASCKEVQYLFRVFCKLQPGLPVLALHGKQQQM 356
Query: 61 RRMAIYAQFCEKRS-VLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYNS 119
+RM +Y F K++ VLF TD+A+RGLDF AV+WV+Q DCPED +YIHRVGRTARY
Sbjct: 357 KRMEVYTCFVRKKAAVLFATDIAARGLDF-PAVNWVIQFDCPEDANTYIHRVGRTARYKE 415
Query: 120 GGRSVLFLTPTEMK-MLEKLREAKIPIHFTKANTKRLQPVSGLLAALLVKYPDMQHRAQK 178
GG ++L L P+E K M+E+L + K+P++ K N +++ + + A L + +++ +AQ+
Sbjct: 416 GGEALLVLLPSEEKGMVEQLAQRKVPVNEIKINPEKITDIQKRMQAFLAQDQELKEKAQR 475
Query: 179 AFITYLRSVHIQKDKEVFDVTKLSIDEFSASLGLPMTPKIRFLNQKKGKMVPVKPVLDNA 238
F++YLRSV++ K+KEVFDV KL + E++ SLGL M P++RFL QK K + VK +
Sbjct: 476 CFVSYLRSVYLMKNKEVFDVFKLPLAEYALSLGLAMAPRVRFL-QKVQKQLSVKETSERN 534
Query: 239 EKED 242
+D
Sbjct: 535 PLKD 538
Score = 56 (24.8 bits), Expect = 1.9e-61, Sum P(2) = 1.9e-61
Identities = 29/117 (24%), Positives = 48/117 (41%)
Query: 236 DNAEKEDKLMISREKLLPDNFTEENVDRDILETKDIEDEGKADLLEDVMRATRVKKNKKL 295
D+ + D L + R D F E+ D L + + + K ++ A ++ K KK
Sbjct: 631 DDTKDLDLLTVKRR----DVFDLESKDSPALNASNSKMKKKTTKTQE---AKKILK-KKF 682
Query: 296 KINVHRPLGTRLVFDEECNTVPPLAMLADTKNANVSLDQDQKTEYYKKIREELKRAD 352
K+N TR+VF E+ V + + A + D K+RE L+ D
Sbjct: 683 KVN------TRIVFTEDGELVQQWPPVQKSGLAKADEEDDASGINLDKVREILREED 733
Score = 40 (19.1 bits), Expect = 9.3e-60, Sum P(2) = 9.3e-60
Identities = 8/15 (53%), Positives = 11/15 (73%)
Query: 333 DQDQKTEYYKKIREE 347
D+ K EY KKI+E+
Sbjct: 733 DKFDKEEYRKKIKEK 747
>UNIPROTKB|Q5ZJF6 [details] [associations]
symbol:DDX10 "Probable ATP-dependent RNA helicase DDX10"
species:9031 "Gallus gallus" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K14776 InterPro:IPR025313 Pfam:PF13959 HOGENOM:HOG000268801
EMBL:AJ720478 IPI:IPI00595697 RefSeq:NP_001073193.1
UniGene:Gga.15096 HSSP:P26196 ProteinModelPortal:Q5ZJF6 SMR:Q5ZJF6
STRING:Q5ZJF6 GeneID:418965 KEGG:gga:418965 CTD:1662
HOVERGEN:HBG102756 InParanoid:Q5ZJF6 OrthoDB:EOG4BK536
NextBio:20822084 Uniprot:Q5ZJF6
Length = 875
Score = 596 (214.9 bits), Expect = 1.9e-61, Sum P(2) = 1.9e-61
Identities = 111/244 (45%), Positives = 174/244 (71%)
Query: 1 MIVPLEQKLDMLWSFIKAHLNSKILVFLTSCKQVKYVFEAFKKLRPGIPLMCLYGRMKQD 60
++ L+ K+++L+SF+++HL K +VF SCK+V+Y+F F KL+PG+P++ L+G+ +Q
Sbjct: 297 IVCELQHKINVLYSFLRSHLKKKSIVFFASCKEVQYLFRVFCKLQPGLPVLALHGKQQQM 356
Query: 61 RRMAIYAQFCEKRS-VLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYNS 119
+RM +Y F K++ VLF TD+A+RGLDF AV+WV+Q DCPED +YIHRVGRTARY
Sbjct: 357 KRMEVYTCFVRKKAAVLFATDIAARGLDF-PAVNWVIQFDCPEDANTYIHRVGRTARYKE 415
Query: 120 GGRSVLFLTPTEMK-MLEKLREAKIPIHFTKANTKRLQPVSGLLAALLVKYPDMQHRAQK 178
GG ++L L P+E K M+E+L + K+P++ K N +++ + + A L + +++ +AQ+
Sbjct: 416 GGEALLVLLPSEEKGMVEQLAQRKVPVNEIKINPEKITDIQKRMQAFLAQDQELKEKAQR 475
Query: 179 AFITYLRSVHIQKDKEVFDVTKLSIDEFSASLGLPMTPKIRFLNQKKGKMVPVKPVLDNA 238
F++YLRSV++ K+KEVFDV KL + E++ SLGL M P++RFL QK K + VK +
Sbjct: 476 CFVSYLRSVYLMKNKEVFDVFKLPLAEYALSLGLAMAPRVRFL-QKVQKQLSVKETSERN 534
Query: 239 EKED 242
+D
Sbjct: 535 PLKD 538
Score = 56 (24.8 bits), Expect = 1.9e-61, Sum P(2) = 1.9e-61
Identities = 29/117 (24%), Positives = 48/117 (41%)
Query: 236 DNAEKEDKLMISREKLLPDNFTEENVDRDILETKDIEDEGKADLLEDVMRATRVKKNKKL 295
D+ + D L + R D F E+ D L + + + K ++ A ++ K KK
Sbjct: 631 DDTKDLDLLTVKRR----DVFDLESKDSPALNASNSKMKKKTTKTQE---AKKILK-KKF 682
Query: 296 KINVHRPLGTRLVFDEECNTVPPLAMLADTKNANVSLDQDQKTEYYKKIREELKRAD 352
K+N TR+VF E+ V + + A + D K+RE L+ D
Sbjct: 683 KVN------TRIVFTEDGELVQQWPPVQKSGLAKADEEDDASGINLDKVREILREED 733
Score = 40 (19.1 bits), Expect = 9.3e-60, Sum P(2) = 9.3e-60
Identities = 8/15 (53%), Positives = 11/15 (73%)
Query: 333 DQDQKTEYYKKIREE 347
D+ K EY KKI+E+
Sbjct: 733 DKFDKEEYRKKIKEK 747
>POMBASE|SPAC1093.05 [details] [associations]
symbol:SPAC1093.05 "ATP-dependent RNA helicase Hca4
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006364 "rRNA processing" evidence=ISO]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 PomBase:SPAC1093.05 GO:GO:0005829 GO:GO:0005524
EMBL:CU329670 GO:GO:0005730 GenomeReviews:CU329670_GR GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K14776 InterPro:IPR025313 Pfam:PF13959 HOGENOM:HOG000268801
OMA:MFERKNQ OrthoDB:EOG4R53B0 PIR:T50068 RefSeq:NP_594652.1
ProteinModelPortal:Q9UTP9 SMR:Q9UTP9 STRING:Q9UTP9
EnsemblFungi:SPAC1093.05.1 GeneID:2541630 KEGG:spo:SPAC1093.05
NextBio:20802723 Uniprot:Q9UTP9
Length = 735
Score = 574 (207.1 bits), Expect = 4.2e-61, Sum P(2) = 4.2e-61
Identities = 111/221 (50%), Positives = 154/221 (69%)
Query: 1 MIVPLEQKLDMLWSFIKAHLNSKILVFLTSCKQVKYVFEAFKKLRPGIPLMCLYGRMKQD 60
+ VPL +KLD+L+ FI+ HL K +VFL+SCKQV++V+E F+++RPGI L+ L+G+ KQ
Sbjct: 263 LTVPLTEKLDILFGFIRTHLKFKTIVFLSSCKQVRFVYETFRRMRPGISLLHLHGKQKQT 322
Query: 61 RRMAIYAQFCEKRSV-LFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYNS 119
R + A+F R V LFCTD+ +RGLDF AVDWV+Q+D PEDV +YIHRVGRTARYN
Sbjct: 323 TRTEVTAKFTSSRHVVLFCTDIVARGLDF-PAVDWVIQLDAPEDVDTYIHRVGRTARYNR 381
Query: 120 GGRSVLFLTPTEMKMLEKLREAKIPIHFTKANTKRLQPVSGLLAALLVKYPDMQHRAQKA 179
G ++L L P+E L++L KI + + + L L K D+++ QKA
Sbjct: 382 SGNALLLLLPSEEAFLKRLESKKIAVERINVKDGKKTSIRNQLQNLCFKDNDIKYIGQKA 441
Query: 180 FITYLRSVHIQKDKEVFDVTKLSIDEFSASLGLPMTPKIRF 220
FI+YLRS+++QKDK+VF + KL ++ F+ SLGLP TPKI F
Sbjct: 442 FISYLRSIYLQKDKDVFQLDKLPVEAFADSLGLPGTPKITF 482
Score = 69 (29.3 bits), Expect = 4.2e-61, Sum P(2) = 4.2e-61
Identities = 22/87 (25%), Positives = 42/87 (48%)
Query: 239 EKEDKLMISREKLLPDNFTEENVDRDILETK----DIEDEGKADLLEDVMRATRVKKNKK 294
+ +D L R++L+ N E+ D D L+ K D+ +E + R ++ +KK
Sbjct: 528 KNQDVLAAHRQRLVEVNSDED--DGDFLQVKRVDHDLPEETGERFNANSKRKEKMASSKK 585
Query: 295 LKINVHRPLGTRLVFDEECNTVPPLAM 321
+ ++ ++ FD+E N +P AM
Sbjct: 586 AMLK-YKKSADKVYFDDEGNAIPFYAM 611
>DICTYBASE|DDB_G0284017 [details] [associations]
symbol:ddx10 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 dictyBase:DDB_G0284017 GO:GO:0005524
GO:GO:0005730 GenomeReviews:CM000153_GR GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
EMBL:AAFI02000059 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K14776 InterPro:IPR025313 Pfam:PF13959
HSSP:P26196 RefSeq:XP_638786.1 ProteinModelPortal:Q54Q94
STRING:Q54Q94 PRIDE:Q54Q94 EnsemblProtists:DDB0234197
GeneID:8624375 KEGG:ddi:DDB_G0284017 OMA:AMNILIA Uniprot:Q54Q94
Length = 878
Score = 580 (209.2 bits), Expect = 1.2e-60, Sum P(3) = 1.2e-60
Identities = 121/305 (39%), Positives = 193/305 (63%)
Query: 2 IVPLEQKLDMLWSFIKAHLNSKILVFLTSCKQVKYVFEAFKKLRPGIPLMCLYGRMKQDR 61
++PLE KL+ML+SFIK HL SKI+VF SCKQV++ E FK L PG L L+G+MKQ
Sbjct: 366 VIPLEMKLNMLFSFIKTHLTSKIIVFFASCKQVRFAHETFKLLNPGTTLFPLHGKMKQWT 425
Query: 62 RMAIYAQFCEKRS-VLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYNSG 120
R+ ++ FC+K++ LF TD+A+RGLDF AV+WV+QVDCP+D+ +YIHRVGRTAR ++
Sbjct: 426 RLEVFEDFCKKKAGTLFATDIAARGLDF-PAVEWVIQVDCPDDIETYIHRVGRTARNDAP 484
Query: 121 GRSVLFLTPTEMK-MLEKLREAKIPIHFTKANTKRLQPVSGLLAALLVKYPDMQHRAQKA 179
G+S+ L P+E M+ + + K+ + N ++L + L++ L + D+++ AQK+
Sbjct: 485 GQSITILLPSEKDGMVNLMEKQKMKFEILEPNPEKLVSIDSKLSSFLSEKTDLKYLAQKS 544
Query: 180 FITYLRSVHIQKDKEVFDVTKLSIDEFSASLGLPMTPKIRFLNQKKGKMVPVKPVLDNAE 239
F++YLRSV+ Q +KE+F + +L+I+EFS SLGL TP I+F + V+ N +
Sbjct: 545 FVSYLRSVYRQSNKEIFKIQELNINEFSKSLGLLGTPNIQF-GKASADSKNKSFVVSNIQ 603
Query: 240 KE--DKLMISREKLLPDNFTEENVDRDILETKDIED-EGKADLLEDVMRATRVKKNKKLK 296
K+ DK + + + +++ +R+ + D ED E +D +D + ++ K
Sbjct: 604 KQLKDKKSKGEKDIDSSDDDDDDEERNKIGNSDDEDSEDDSDFQDDSDDDNKKVTKQQPK 663
Query: 297 INVHR 301
N+ +
Sbjct: 664 TNIEK 668
Score = 44 (20.5 bits), Expect = 1.2e-60, Sum P(3) = 1.2e-60
Identities = 10/43 (23%), Positives = 22/43 (51%)
Query: 310 DEECNTVPPLAMLADTKNANVSLDQDQKTEYYKKIREELKRAD 352
++E N + L ++ +V D T Y +K++ E+++ D
Sbjct: 721 NKEKNFINDPTKLKFQESTSVPKDGKLPTSYIEKVKSEVEKGD 763
Score = 44 (20.5 bits), Expect = 3.1e-58, Sum P(2) = 3.1e-58
Identities = 10/27 (37%), Positives = 15/27 (55%)
Query: 412 DSD--SDNDNDERKQNKDDNGPNIDSI 436
DSD D+D+D +K K NI+ +
Sbjct: 643 DSDFQDDSDDDNKKVTKQQPKTNIEKL 669
Score = 39 (18.8 bits), Expect = 1.2e-60, Sum P(3) = 1.2e-60
Identities = 7/21 (33%), Positives = 15/21 (71%)
Query: 411 FDSDSDNDNDERKQNKDDNGP 431
++SD D+D+DE ++++ P
Sbjct: 836 YNSD-DDDDDEESESEEQPKP 855
Score = 39 (18.8 bits), Expect = 1.2e-60, Sum P(3) = 1.2e-60
Identities = 9/29 (31%), Positives = 19/29 (65%)
Query: 412 DSDSDNDNDE---RKQNKDDNGPNIDSIS 437
DSD ++++D+ ++ N DD+ + +S S
Sbjct: 821 DSDDESNDDDVWGQEYNSDDDDDDEESES 849
Score = 38 (18.4 bits), Expect = 5.1e-60, Sum P(3) = 5.1e-60
Identities = 10/26 (38%), Positives = 14/26 (53%)
Query: 322 LADTKNANVSLDQDQKTEYYKKIREE 347
L D KNANV + QK ++ E+
Sbjct: 669 LFDRKNANVMSETYQKLRTKEEDEED 694
Score = 37 (18.1 bits), Expect = 1.9e-60, Sum P(3) = 1.9e-60
Identities = 8/27 (29%), Positives = 12/27 (44%)
Query: 410 YFDSDSDNDNDERKQNKDDNGPNIDSI 436
YF + D E +N D+ N D +
Sbjct: 805 YFVPPGEKDPYENGENDSDDESNDDDV 831
>CGD|CAL0004182 [details] [associations]
symbol:HCA4 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 CGD:CAL0004182 GO:GO:0005524 GO:GO:0005730
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 EMBL:AACQ01000023 EMBL:AACQ01000025
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
RefSeq:XP_720233.1 RefSeq:XP_720463.1 ProteinModelPortal:Q5AF95
STRING:Q5AF95 GeneID:3637911 GeneID:3638091 KEGG:cal:CaO19.10227
KEGG:cal:CaO19.2712 KO:K14776 InterPro:IPR025313 Pfam:PF13959
Uniprot:Q5AF95
Length = 765
Score = 570 (205.7 bits), Expect = 2.0e-59, Sum P(2) = 2.0e-59
Identities = 115/227 (50%), Positives = 157/227 (69%)
Query: 3 VPLEQKLDMLWSFIKAHLNSKILVFLTSCKQVKYVFEAFKKLRPGIPLMCLYGRMKQDRR 62
VPL++KLD+LWSFIK+HL SKILVF +S KQV+Y +E F+ L+PGI LM LYGR KQ R
Sbjct: 275 VPLDEKLDVLWSFIKSHLKSKILVFFSSSKQVQYTYETFRTLQPGISLMKLYGRHKQTSR 334
Query: 63 MAIYAQFCE-KRSVLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYNSGG 121
+ +F + + + LF TD+ +RGLDF A+DWVVQVDCPED A+Y+HRVGR+AR+ G
Sbjct: 335 LETTMKFSQAQHACLFATDIVARGLDF-PAIDWVVQVDCPEDAATYVHRVGRSARFGRKG 393
Query: 122 RSVLFLTPTEMK-MLEKLREAKIPIHFTKANTKRLQPVSGLLAALLVKYPDMQHRAQKAF 180
+S+L L P+E + ML++L+ KI K + + L +L K P M++ Q+AF
Sbjct: 394 KSLLMLLPSEEEGMLKRLKIHKIEPKLMNIKQKSKKSIRPQLQSLCFKDPVMKNLGQRAF 453
Query: 181 ITYLRSVHIQKDKEVFDVTKLSIDEFSASLGLPMTPKIRFLNQKKGK 227
I Y +SVHIQKDK+VF V +L + ++ASLGLP PKI+ + K
Sbjct: 454 IAYFKSVHIQKDKDVFKVEELPAESYAASLGLPGAPKIKIKGGESNK 500
Score = 57 (25.1 bits), Expect = 2.0e-59, Sum P(2) = 2.0e-59
Identities = 27/103 (26%), Positives = 46/103 (44%)
Query: 255 NFTEENVDRDILETKDIEDEGKADLLEDV---MRATRVKKNKKLKINV-HRPLGTRLVFD 310
N E+ D D + K + E K + L D+ + + KK K + + T+L FD
Sbjct: 557 NSDGESEDEDFMTVKRKDHELKEEELPDLTIPVSKRQAKKALSRKATLASKGNPTKLKFD 616
Query: 311 EECNTVPPLAMLADTKNANVSLD-QDQKTEYYKKIREELKRAD 352
++ + L D + + D + QK E+ K RE +K +D
Sbjct: 617 DD-GVAHAIYELEDEDDFIKAGDAKKQKEEFVNKERETMKISD 658
>MGI|MGI:1924841 [details] [associations]
symbol:Ddx10 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 10"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 MGI:MGI:1924841 GO:GO:0005524
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K14776 InterPro:IPR025313 Pfam:PF13959 HOGENOM:HOG000268801
GeneTree:ENSGT00550000074980 CTD:1662 HOVERGEN:HBG102756
OrthoDB:EOG4BK536 OMA:ADKVIEP ChiTaRS:DDX10 EMBL:BC049261
IPI:IPI00896604 RefSeq:NP_084212.2 UniGene:Mm.133560
ProteinModelPortal:Q80Y44 SMR:Q80Y44 STRING:Q80Y44
PhosphoSite:Q80Y44 PaxDb:Q80Y44 PRIDE:Q80Y44
Ensembl:ENSMUST00000065630 GeneID:77591 KEGG:mmu:77591
UCSC:uc009plz.2 InParanoid:Q80Y44 NextBio:347162 Bgee:Q80Y44
CleanEx:MM_DDX10 Genevestigator:Q80Y44
GermOnline:ENSMUSG00000053289 Uniprot:Q80Y44
Length = 875
Score = 586 (211.3 bits), Expect = 2.1e-59, Sum P(2) = 2.1e-59
Identities = 119/262 (45%), Positives = 180/262 (68%)
Query: 1 MIVPLEQKLDMLWSFIKAHLNSKILVFLTSCKQVKYVFEAFKKLRPGIPLMCLYGRMKQD 60
+I L QK+ +L+SF+++HL K +VF +SCK+V+Y++ F +LRPGI ++ L+GR +Q
Sbjct: 293 IICELHQKISVLFSFLRSHLKKKSIVFFSSCKEVQYLYRVFCRLRPGISILALHGRQQQM 352
Query: 61 RRMAIYAQFCEKRS-VLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYNS 119
RRM +Y +F KR+ VLF TD+A+RGLDF AV+WV+Q DCPED +YIHR GRTARY
Sbjct: 353 RRMEVYNEFVRKRAAVLFATDIAARGLDF-PAVNWVLQFDCPEDANTYIHRAGRTARYKE 411
Query: 120 GGRSVLFLTPTEMK-MLEKLREAKIPIHFTKANTKRLQPVSGLLAALLVKYPDMQHRAQK 178
G ++L L P+E + M+++L + K+P+ K N ++L V L + L + D++ RAQ+
Sbjct: 412 DGEALLILLPSEEQGMVQQLLQKKVPVKEIKINPEKLIDVQKKLESFLAQDQDLKERAQR 471
Query: 179 AFITYLRSVHIQKDKEVFDVTKLSIDEFSASLGLPMTPKIRFLNQKKGKMVPVKPVLDNA 238
F++Y+RSV++ KDKEVF+V+KL I E++ SLGL + P+IRFL QK K P ++ N
Sbjct: 472 CFVSYIRSVYLMKDKEVFNVSKLPITEYALSLGLAVAPRIRFL-QKLEKQ-PSTELVKNP 529
Query: 239 EKEDKLMISREKLLPDNFTEEN 260
E + R LP++ +E+
Sbjct: 530 VTE--AVPPRAPSLPNDEADES 549
Score = 48 (22.0 bits), Expect = 2.1e-59, Sum P(2) = 2.1e-59
Identities = 17/56 (30%), Positives = 25/56 (44%)
Query: 259 ENVDRDILETKDIEDEGKADLLEDVMRATRVKKNKKLKINVHRPL--GTRLVFDEE 312
E+ + + +TK ++ K + ED R + KK K PL G L DEE
Sbjct: 810 EDTNHKMSDTKKKQETRKRNNTEDDDVRPRSRHGKKAKWETVEPLDTGLSLAEDEE 865
>FB|FBgn0030855 [details] [associations]
symbol:CG5800 species:7227 "Drosophila melanogaster"
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0007526 "larval somatic muscle development"
evidence=IMP] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0022008 EMBL:AE014298
GO:GO:0006200 GO:GO:0003723 GO:GO:0007526 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0016779
KO:K14776 InterPro:IPR025313 Pfam:PF13959
GeneTree:ENSGT00550000074980 OMA:ADKVIEP HSSP:P10081 EMBL:AY119628
RefSeq:NP_573230.1 UniGene:Dm.13464 SMR:Q9VX34 STRING:Q9VX34
EnsemblMetazoa:FBtr0074453 GeneID:32742 KEGG:dme:Dmel_CG5800
UCSC:CG5800-RA FlyBase:FBgn0030855 InParanoid:Q9VX34
OrthoDB:EOG4MCVFH GenomeRNAi:32742 NextBio:780142 Uniprot:Q9VX34
Length = 826
Score = 583 (210.3 bits), Expect = 2.9e-59, Sum P(2) = 2.9e-59
Identities = 126/294 (42%), Positives = 192/294 (65%)
Query: 1 MIVPLEQKLDMLWSFIKAHLNSKILVFLTSCKQVKYVFEAFKKLRPGIPLMCLYGRMKQD 60
+++ LE K+ MLWSFIK HL KI+VF+ SCKQ KY++E F KLRPG PL+ LYG + QD
Sbjct: 312 VVLNLEDKITMLWSFIKNHLKQKIIVFVASCKQAKYLYEIFCKLRPGSPLLALYGTLHQD 371
Query: 61 RRMAIYAQFCEKRSV-LFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYNS 119
RR+AIY F K V +F TDVASRGLDF AV+WVVQ+DCPEDV+ YIHR GR+AR +
Sbjct: 372 RRIAIYEDFLRKSHVVMFSTDVASRGLDF-PAVNWVVQLDCPEDVSQYIHRAGRSARNKT 430
Query: 120 GGRSVLFLTPTEMK-MLEKLREA-KIPIHFTKANTKRLQPVSGLLAALLVKYPDMQHRAQ 177
G +L LTP+E + M+ L+E I I + + K+L + A L ++P+++ AQ
Sbjct: 431 RGECLLVLTPSEEEYMISALKEQLNIDIRCVQIDPKKLFSPRVKIEAFLAQFPELRATAQ 490
Query: 178 KAFITYLRSVHIQKDKEVFDVTKLSIDEFSASLGLPMTPKIRFLNQ---KKGKMVPVKPV 234
+AF++Y++SV + ++K +F+V L +D F+ SLGL +TP++ FL + ++ ++ K
Sbjct: 491 RAFLSYIKSVFLMRNKRLFNVFSLDLDAFAQSLGLAVTPRVPFLEKFLWRQKQLQQQKEQ 550
Query: 235 LDNAEKEDKLM--ISREKLLP--DNFTEENVDRDILETK--DIEDEGKADLLED 282
DNA+ + L+ +++++ D E + D D ++ K D + EG+ L++
Sbjct: 551 GDNAKSINPLLSKLTKQQSFGGGDEDEENSDDEDFIKVKRKDHDVEGEPVKLDE 604
Score = 43 (20.2 bits), Expect = 2.9e-59, Sum P(2) = 2.9e-59
Identities = 12/34 (35%), Positives = 18/34 (52%)
Query: 404 RKKAKIYFDSDSDNDNDERKQNKDDNGPNIDSIS 437
RKKA+ ++ +DE +Q DDN + S S
Sbjct: 716 RKKAE-----EAKGSDDEEEQQDDDNADDAGSES 744
Score = 41 (19.5 bits), Expect = 4.7e-59, Sum P(2) = 4.7e-59
Identities = 7/29 (24%), Positives = 17/29 (58%)
Query: 398 SMERGRRKKAKIYFDSDSDNDNDERKQNK 426
++++ + +K+ FD + + D+R Q K
Sbjct: 634 ALKKNLQVNSKLKFDDEGETMADDRSQMK 662
>RGD|1308990 [details] [associations]
symbol:Ddx10 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 10"
species:10116 "Rattus norvegicus" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 RGD:1308990
GO:GO:0005524 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:CH473975 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 KO:K14776 InterPro:IPR025313 Pfam:PF13959
GeneTree:ENSGT00550000074980 CTD:1662 OrthoDB:EOG4BK536 OMA:ADKVIEP
IPI:IPI00869603 RefSeq:NP_001100290.1 UniGene:Rn.99481
Ensembl:ENSRNOT00000017683 GeneID:300710 KEGG:rno:300710
UCSC:RGD:1308990 NextBio:647348 Uniprot:D3ZBY5
Length = 874
Score = 587 (211.7 bits), Expect = 1.1e-58, Sum P(2) = 1.1e-58
Identities = 117/243 (48%), Positives = 170/243 (69%)
Query: 1 MIVPLEQKLDMLWSFIKAHLNSKILVFLTSCKQVKYVFEAFKKLRPGIPLMCLYGRMKQD 60
+I L QK+ +L+SF+++HL K +VF +SCK+V+Y++ F +LRPGI ++ L+GR +Q
Sbjct: 293 IICELHQKISVLFSFLRSHLTKKSIVFFSSCKEVQYLYRVFCRLRPGISILALHGRQQQM 352
Query: 61 RRMAIYAQFCEKRS-VLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYNS 119
RRM +Y +F KR+ VLF TD+A+RGLDF AV+WV+Q DCPED +YIHR GRTARY
Sbjct: 353 RRMEVYNEFVRKRAAVLFATDIAARGLDF-PAVNWVLQFDCPEDANTYIHRAGRTARYKE 411
Query: 120 GGRSVLFLTPTEMK-MLEKLREAKIPIHFTKANTKRLQPVSGLLAALLVKYPDMQHRAQK 178
G ++L L P+E + M+++L + K+P+ K N ++L V L + L + D++ RAQ+
Sbjct: 412 DGEALLILLPSEEQGMVQQLLQKKVPVKEIKINPEKLIDVQKRLESFLAQDQDLKERAQR 471
Query: 179 AFITYLRSVHIQKDKEVFDVTKLSIDEFSASLGLPMTPKIRFLNQKKGKMVPVKPVLDNA 238
F++Y+RSV++ KDKEVFDV KL I E++ SLGL + P+IRFL QK K P K + N
Sbjct: 472 CFVSYIRSVYLMKDKEVFDVNKLPITEYALSLGLAVAPRIRFL-QKMEKQ-PNKELGKNQ 529
Query: 239 EKE 241
E
Sbjct: 530 VTE 532
Score = 40 (19.1 bits), Expect = 1.1e-58, Sum P(2) = 1.1e-58
Identities = 18/57 (31%), Positives = 26/57 (45%)
Query: 259 ENVDRDILETKDIEDEGKADLLE-DVMRATRVKKNKKLKINVHRPL--GTRLVFDEE 312
E+ + +TK ++ K + E D +R R + KK K PL G L DEE
Sbjct: 809 EDTKHKMSDTKKKQEMRKRNNTEVDDVRP-RSRHGKKAKWETLEPLDTGLSLAEDEE 864
>ZFIN|ZDB-GENE-071022-2 [details] [associations]
symbol:ddx10 "DEAD (Asp-Glu-Ala-Asp) box polypeptide
10" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
ZFIN:ZDB-GENE-071022-2 GO:GO:0005524 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313 Pfam:PF13959
GeneTree:ENSGT00550000074980 EMBL:CR450711 IPI:IPI00898518
Ensembl:ENSDART00000125785 ArrayExpress:F1QMM9 Bgee:F1QMM9
Uniprot:F1QMM9
Length = 875
Score = 584 (210.6 bits), Expect = 2.0e-58, Sum P(2) = 2.0e-58
Identities = 128/331 (38%), Positives = 207/331 (62%)
Query: 1 MIVPLEQKLDMLWSFIKAHLNSKILVFLTSCKQVKYVFEAFKKLRPGIPLMCLYGRMKQD 60
++ L QK++ML+SF+++HL KI+VF CK+V+Y+F F +LRPGI ++ L+G+ +Q
Sbjct: 294 VVCELHQKVNMLYSFLRSHLQKKIIVFFACCKEVQYLFRIFCRLRPGISVLALHGKQQQM 353
Query: 61 RRMAIYAQFCEKRS-VLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYNS 119
+R+ +Y F K S VLF TD+A+RGLDF AV+WV+Q DCPED +YIHRVGRTARY
Sbjct: 354 KRVEVYNDFVRKTSAVLFATDIAARGLDF-PAVNWVLQFDCPEDANTYIHRVGRTARYKE 412
Query: 120 GGRSVLFLTPTEMK-MLEKLREAKIPIHFTKANTKRLQPVSGLLAALLVKYPDMQHRAQK 178
GG ++L L P+E K M+ +L+E K+PI+ + N ++L V L A L + + + RAQ+
Sbjct: 413 GGEALLVLLPSEEKGMISQLQEKKVPINKIQVNPEKLMSVQQKLEAFLAQEKEQKERAQR 472
Query: 179 AFITYLRSVHIQKDKEVFDVTKLSIDEFSASLGLPMTPKIRFL-NQKKGKMVPVKPVLDN 237
F++YLRSV++ K+K+VFDV +L + E++ SLGL + P++RFL ++ + +
Sbjct: 473 CFVSYLRSVYLMKNKDVFDVLQLKLPEYAMSLGLAVAPRVRFLLKAQQQRRTAAQDDSST 532
Query: 238 A--EKEDKLM-----ISREKLLPD-NFTEENVDRDILETKDI-----EDEGKADLLE-DV 283
A + ED+L + ++K + + +EE+ D+D L+ + E++ D E D+
Sbjct: 533 AGHQSEDELQSFTAQLQQQKTKSEPSQSEEDKDQDSLKPLSLLCGFNEEDDDDDQREADL 592
Query: 284 MRATRVKKNKKLKINVHRPLGTRLVFDEECN 314
+ K + L V+R + V ++ N
Sbjct: 593 LTVKSAKTH--LIPEVNRSIQVESVLSQDLN 621
Score = 41 (19.5 bits), Expect = 2.0e-58, Sum P(2) = 2.0e-58
Identities = 7/26 (26%), Positives = 15/26 (57%)
Query: 403 RRKKAKIYFDSDSDNDNDERKQNKDD 428
+ K+ K D D D+++D+ + D+
Sbjct: 764 QHKEEKRKADGDDDDNDDDEDEGADE 789
Score = 40 (19.1 bits), Expect = 2.6e-58, Sum P(2) = 2.6e-58
Identities = 10/30 (33%), Positives = 17/30 (56%)
Query: 403 RRKKAKIYFDSDSDNDNDERKQNKDDNGPN 432
+ +K K D D DND+DE + ++ P+
Sbjct: 766 KEEKRKADGDDD-DNDDDEDEGADEEFDPS 794
>SGD|S000003570 [details] [associations]
symbol:HCA4 "DEAD box RNA helicase" species:4932
"Saccharomyces cerevisiae" [GO:0005730 "nucleolus" evidence=IEA;IC]
[GO:0006364 "rRNA processing" evidence=IEA;IMP] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008186 "RNA-dependent ATPase activity" evidence=IDA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0042254
"ribosome biogenesis" evidence=IEA] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=IDA;IMP] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 SGD:S000003570
GO:GO:0005524 GO:GO:0005730 EMBL:BK006943 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K14776 InterPro:IPR025313 Pfam:PF13959 HOGENOM:HOG000268801
OMA:MFERKNQ OrthoDB:EOG4R53B0 EMBL:U72149 EMBL:Z49308 EMBL:AY693118
PIR:S56805 RefSeq:NP_012501.1 ProteinModelPortal:P20448 SMR:P20448
DIP:DIP-6819N IntAct:P20448 MINT:MINT-620511 STRING:P20448
PaxDb:P20448 PeptideAtlas:P20448 EnsemblFungi:YJL033W GeneID:853419
KEGG:sce:YJL033W CYGD:YJL033w GeneTree:ENSGT00550000074980
NextBio:973942 Genevestigator:P20448 GermOnline:YJL033W
Uniprot:P20448
Length = 770
Score = 548 (198.0 bits), Expect = 7.8e-58, Sum P(2) = 7.8e-58
Identities = 115/227 (50%), Positives = 159/227 (70%)
Query: 3 VPLEQKLDMLWSFIKAHLNSKILVFLTSCKQVKYVFEAFKKLRPGIPLMCLYGRMKQDRR 62
VPL KLD+L+SFIK+HL K++VFL+S KQV +V+E F+K++PGI LM L+GR KQ R
Sbjct: 273 VPLADKLDILFSFIKSHLKCKMIVFLSSSKQVHFVYETFRKMQPGISLMHLHGRQKQRAR 332
Query: 63 MAIYAQFCEKRSV-LFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYNSGG 121
+F + V LF TDV +RG+DF AVDWVVQVDCPEDV +YIHRVGR ARY G
Sbjct: 333 TETLDKFNRAQQVCLFATDVVARGIDF-PAVDWVVQVDCPEDVDTYIHRVGRCARYGKKG 391
Query: 122 RSVLFLTPTEMK-MLEKLREAKI-P--IHFTKANTKRLQPVSGLLAALLVKYPDMQHRAQ 177
+S++ LTP E + L++L KI P ++ ++ K ++P L +LL K P++++ Q
Sbjct: 392 KSLIMLTPQEQEAFLKRLNARKIEPGKLNIKQSKKKSIKPQ---LQSLLFKDPELKYLGQ 448
Query: 178 KAFITYLRSVHIQKDKEVFDVTKLSIDEFSASLGLPMTPKIRFLNQK 224
KAFI+Y+RS+++QKDK+VF +L +EF+ SLGLP PKI+ K
Sbjct: 449 KAFISYVRSIYVQKDKQVFKFDELPTEEFAYSLGLPGAPKIKMKGMK 495
Score = 64 (27.6 bits), Expect = 7.8e-58, Sum P(2) = 7.8e-58
Identities = 28/112 (25%), Positives = 54/112 (48%)
Query: 239 EKEDKLMISREKL-LPDNFTEENVDRDILETKDIEDE-GKADL----LEDVMRATRVKKN 292
E++++ ++S L + +E+ D D + K + E +A+L L RA + +
Sbjct: 539 ERKNQTILSEHYLNITKAQAQEDEDDDFISVKRKDHEINEAELPALTLPTSRRAQKKALS 598
Query: 293 KKLKINVHRPLGTRLVFDEECNTVPPLAMLADTKNANVSLDQD-QKTEYYKK 343
KK + + ++L+FD+E P+ L D + + D + QKTE+ K
Sbjct: 599 KKASL-ASKGNASKLIFDDE-GEAHPVYELEDEEEFHKRGDAEVQKTEFLTK 648
Score = 42 (19.8 bits), Expect = 1.6e-55, Sum P(2) = 1.6e-55
Identities = 9/31 (29%), Positives = 19/31 (61%)
Query: 320 AMLADTKNANVSLDQDQKTEYYKKIREELKR 350
A++AD N + + +++K E +K E ++R
Sbjct: 651 AVMADIDNIDKQVAKEKKQEKKRKRLEAMRR 681
>UNIPROTKB|Q08DT0 [details] [associations]
symbol:DDX10 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K14776
InterPro:IPR025313 Pfam:PF13959 HOGENOM:HOG000268801
GeneTree:ENSGT00550000074980 CTD:1662 HOVERGEN:HBG102756
OrthoDB:EOG4BK536 OMA:ADKVIEP EMBL:DAAA02040206 EMBL:DAAA02040207
EMBL:DAAA02040208 EMBL:DAAA02040209 EMBL:DAAA02040210
EMBL:DAAA02040211 EMBL:DAAA02040212 EMBL:DAAA02040213
EMBL:DAAA02040214 EMBL:DAAA02040215 EMBL:DAAA02040216
EMBL:DAAA02040217 EMBL:BC123579 IPI:IPI00717487
RefSeq:NP_001070349.1 UniGene:Bt.63620 SMR:Q08DT0
Ensembl:ENSBTAT00000003086 GeneID:528483 KEGG:bta:528483
InParanoid:Q08DT0 NextBio:20874836 Uniprot:Q08DT0
Length = 876
Score = 597 (215.2 bits), Expect = 8.0e-58, P = 8.0e-58
Identities = 118/261 (45%), Positives = 182/261 (69%)
Query: 1 MIVPLEQKLDMLWSFIKAHLNSKILVFLTSCKQVKYVFEAFKKLRPGIPLMCLYGRMKQD 60
++ L+QK+ +L+SF+++HL K +VF +SCK+V+Y++ F +LRPG+ L+ L+GR +Q
Sbjct: 293 IVCELQQKISVLYSFLRSHLKKKSIVFFSSCKEVQYLYRVFCRLRPGVSLLALHGRQQQM 352
Query: 61 RRMAIYAQFCEKRS-VLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYNS 119
RRM +Y +F KR+ VLF TD+A+RGLDF AV+WV+Q DCPED +YIHR GRTARY
Sbjct: 353 RRMEVYNEFVRKRAAVLFATDIAARGLDF-PAVNWVLQFDCPEDANTYIHRAGRTARYKE 411
Query: 120 GGRSVLFLTPTEMK-MLEKLREAKIPIHFTKANTKRLQPVSGLLAALLVKYPDMQHRAQK 178
G ++L L P+E K M+++L + K+P+ K N ++L V L + L + D++ RAQ+
Sbjct: 412 DGEALLILLPSEEKGMVQQLLQKKVPVKEIKINPEKLIDVQKKLESFLAQDQDLKERAQR 471
Query: 179 AFITYLRSVHIQKDKEVFDVTKLSIDEFSASLGLPMTPKIRFLNQKKGKMVPVKPVLDNA 238
FI+Y+RSV++ KDKE+FDV+KL I +++ SLGL + P+IRFL Q+ K P K ++
Sbjct: 472 CFISYIRSVYLMKDKEIFDVSKLPISDYALSLGLAVAPRIRFL-QRMQKQ-PSKELV--V 527
Query: 239 EKEDKLMISREKLLPDNFTEE 259
+++K+ R L ++ EE
Sbjct: 528 SEDNKVTEPRAPSLTNDEVEE 548
>UNIPROTKB|E2RC35 [details] [associations]
symbol:DDX10 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 KO:K14776
InterPro:IPR025313 Pfam:PF13959 GeneTree:ENSGT00550000074980
CTD:1662 OMA:ADKVIEP EMBL:AAEX03003508 RefSeq:XP_536583.2
Ensembl:ENSCAFT00000022758 GeneID:479448 KEGG:cfa:479448
Uniprot:E2RC35
Length = 871
Score = 591 (213.1 bits), Expect = 3.6e-57, P = 3.6e-57
Identities = 115/261 (44%), Positives = 182/261 (69%)
Query: 1 MIVPLEQKLDMLWSFIKAHLNSKILVFLTSCKQVKYVFEAFKKLRPGIPLMCLYGRMKQD 60
++ L+QK+ +L+SF+++HL K +VF +SCK+V+Y++ F +LRPGI ++ L+GR +Q
Sbjct: 293 IVCELQQKISVLYSFLRSHLKKKSIVFFSSCKEVQYLYRVFCRLRPGISILALHGRQQQM 352
Query: 61 RRMAIYAQFCEKRS-VLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYNS 119
RRM +Y +F KRS VLF TD+A+RGLDF AV+WV+Q DCPED +YIHR GRTARY
Sbjct: 353 RRMEVYNEFVRKRSAVLFATDIAARGLDF-PAVNWVLQFDCPEDANTYIHRAGRTARYKE 411
Query: 120 GGRSVLFLTPTEMK-MLEKLREAKIPIHFTKANTKRLQPVSGLLAALLVKYPDMQHRAQK 178
G ++L L P+E K M+++L + K+P+ K N ++L V L + L + D++ RAQ+
Sbjct: 412 DGEALLILLPSEEKGMVQQLLQKKVPVKEIKINPEKLIDVQKKLESFLAQDKDLKERAQR 471
Query: 179 AFITYLRSVHIQKDKEVFDVTKLSIDEFSASLGLPMTPKIRFLNQKKGKMVPVKPVLDNA 238
F++Y+RSV++ K+KE+FDV+ L + E++ SLGL + P++RFL QK K P K ++
Sbjct: 472 CFVSYIRSVYLMKNKEIFDVSTLPVPEYALSLGLAVAPRVRFL-QKMQKQ-PTKELM--V 527
Query: 239 EKEDKLMISREKLLPDNFTEE 259
++++++ R L ++ EE
Sbjct: 528 SQDNQVIEPRAPSLTNDEVEE 548
>UNIPROTKB|A4RGU2 [details] [associations]
symbol:DBP4 "ATP-dependent RNA helicase DBP4"
species:242507 "Magnaporthe oryzae 70-15" [GO:0043581 "mycelium
development" evidence=IEP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0003723 GO:GO:0043581 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:CM001232 GO:GO:0006364 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K14776
InterPro:IPR025313 Pfam:PF13959 OrthoDB:EOG4R53B0
RefSeq:XP_003715000.1 ProteinModelPortal:A4RGU2 STRING:A4RGU2
EnsemblFungi:MGG_08049T0 GeneID:2678339 KEGG:mgr:MGG_08049
Uniprot:A4RGU2
Length = 798
Score = 516 (186.7 bits), Expect = 1.4e-56, Sum P(3) = 1.4e-56
Identities = 111/255 (43%), Positives = 166/255 (65%)
Query: 1 MIVPLEQKLDMLWSFIKAHLNSKILVFLTSCKQVKYVFEAFKKLRPGIPLMCLYGRMKQD 60
++ PL +KLD LW FIKA+L SK++VFL+S KQV++V+E+F++++PGIPL+ ++GR KQ
Sbjct: 273 IVTPLPEKLDTLWGFIKANLKSKMVVFLSSGKQVRFVYESFRQMQPGIPLLHMHGRQKQL 332
Query: 61 RRMAIYAQF-CEKRSVLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYNS 119
R+ + +F K + LF TDV +RG+DF VDWVVQVD PED YIHRVGRTARY
Sbjct: 333 ARLDVTKRFDSSKHACLFATDVIARGIDFT-GVDWVVQVDAPEDTDDYIHRVGRTARYER 391
Query: 120 GGRSVLFLTPTEMK-MLEKLREAKIPIHFTKANTKRLQPVSGLLAALLVKYPDMQHRAQK 178
G++V+FL P+E ML++L K+PI A + + + L ++ K D+++ AQK
Sbjct: 392 EGKAVIFLDPSEEAGMLKRLERKKVPITKVTAKDSKKKSIRDELQSICWKSHDVKYLAQK 451
Query: 179 AFITYLRSVH--IQKDK-------EVFDVTKLSIDEFSASLGLPMTPKIRFL---NQKKG 226
AFI+Y R+VH ++D+ +VF KL ++ F+ S+GL P+I+F + K+
Sbjct: 452 AFISYARAVHRATERDEKHNENSDQVFKFDKLDLEGFAKSMGLAGAPQIKFQKGEDVKRM 511
Query: 227 KMVPVKPVLDNAEKE 241
K P P+ +E E
Sbjct: 512 KNAPRAPLSSGSEDE 526
Score = 64 (27.6 bits), Expect = 1.4e-56, Sum P(3) = 1.4e-56
Identities = 29/119 (24%), Positives = 53/119 (44%)
Query: 236 DNAEKEDKLMISREKLLPDNFTEENVDRDI-LETKDIEDEGKADLLEDVMRATRVKKNKK 294
+N E+ED ++ L D E L T D G +L+ D R ++ K+KK
Sbjct: 568 ENDEEED-FFTTKRVLRGDELDEAAGGAGAGLPTAKTIDLGGTELVLDSKRREKLIKSKK 626
Query: 295 LKINVHRPLGTRLVFDEECNTVPPLAMLADTKNANVSLDQDQ-KTEYYKKIREELKRAD 352
+ + G +LVFD++ PL L D + + + ++ ++ +++K AD
Sbjct: 627 QLAKL-KGKGQKLVFDDD-GVAHPLYTLQDEDDFKQQGPAEALRKQFVEQEGDKVKEAD 683
Score = 46 (21.3 bits), Expect = 1.1e-54, Sum P(3) = 1.1e-54
Identities = 15/47 (31%), Positives = 26/47 (55%)
Query: 254 DNFTEENVDRDILETKDIEDEG----KADLLEDVMRATRVKKNKKLK 296
D+F ++ + L + +E EG +AD+ +D A + K+ KKLK
Sbjct: 656 DDFKQQG-PAEALRKQFVEQEGDKVKEADI-DDKALAKQKKREKKLK 700
Score = 45 (20.9 bits), Expect = 1.4e-56, Sum P(3) = 1.4e-56
Identities = 11/20 (55%), Positives = 13/20 (65%)
Query: 404 RKKAKIYFDSDSDNDNDERK 423
+KK K +F DSD DERK
Sbjct: 754 KKKPKKWFQDDSD---DERK 770
Score = 38 (18.4 bits), Expect = 8.4e-51, Sum P(2) = 8.4e-51
Identities = 13/43 (30%), Positives = 22/43 (51%)
Query: 241 EDKLMISREKLLPDN-FTEENVDRDILETKDIEDEGKADLLED 282
+D+ R K P F +++ D ++K IE + + D LED
Sbjct: 745 DDESEDERPKKKPKKWFQDDSDDERKPKSKVIELDHEPDTLED 787
>WB|WBGene00021277 [details] [associations]
symbol:Y23H5B.6 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0040035 "hermaphrodite
genitalia development" evidence=IMP] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0009792 GO:GO:0040007 GO:GO:0040010 GO:GO:0002119
GO:GO:0003723 GO:GO:0040035 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K14776 InterPro:IPR025313 Pfam:PF13959
HOGENOM:HOG000268801 GeneTree:ENSGT00550000074980 OMA:ADKVIEP
HSSP:P10081 EMBL:FO080963 RefSeq:NP_490989.1
ProteinModelPortal:Q9N478 SMR:Q9N478 STRING:Q9N478 PaxDb:Q9N478
EnsemblMetazoa:Y23H5B.6 GeneID:171810 KEGG:cel:CELE_Y23H5B.6
UCSC:Y23H5B.6 CTD:171810 WormBase:Y23H5B.6 InParanoid:Q9N478
NextBio:872791 Uniprot:Q9N478
Length = 732
Score = 551 (199.0 bits), Expect = 3.0e-53, P = 3.0e-53
Identities = 130/362 (35%), Positives = 206/362 (56%)
Query: 1 MIVPLEQKLDMLWSFIKAHLNSKILVFLTSCKQVKYVFEAFKKLRPGIPLMCLYGRMKQD 60
+IV E K++ LWSFI+AH K LVF++SCKQ +++ EAF +LRPG+P+M L+G M Q
Sbjct: 300 VIVEEEHKINALWSFIEAHRKKKSLVFVSSCKQARFLTEAFSQLRPGLPVMGLWGTMNQK 359
Query: 61 RRMAIYAQFCE-KRSVLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYNS 119
+R+ + +F E K +VL TDVASRGLDF +DWV+QVDCP + YIHRVGR+AR +
Sbjct: 360 KRIETFTKFDESKAAVLIATDVASRGLDFEH-IDWVIQVDCPAQIDDYIHRVGRSARMDD 418
Query: 120 GGRSVLFLTPT-EMKMLEKLREAKIPIHFTKANTKRLQPVSGLLAALLVKYPDMQHRAQK 178
G S+L ++P+ E M+ KL + IPI K + + V L A+L + +++ AQK
Sbjct: 419 SGNSLLMVSPSQEEAMIGKLEKHSIPIEELKIHPDAMSDVRVKLRAILAESQELKEYAQK 478
Query: 179 AFITYLRSVHIQKDKEVFDVTKLSIDEFSASLGLPMTPKIRFLNQK---KGKMVPVKPVL 235
+ + YLRS++ KDK+VFDV + + S GL P++RFLN+K G+ + K V
Sbjct: 479 SIVAYLRSIYTMKDKKVFDVEAIDAAALADSFGLVSVPRVRFLNKKAKKSGEKLMEKEVK 538
Query: 236 DNAEKEDKLMISREKLLPDNFTEENVDRDILETKDIEDEGKADLLEDVMRATRVKKNKKL 295
+ E+E+ ++ + + D+ V + E + I++E A+ + ++ + K K L
Sbjct: 539 E--EEEEASLVGKFAIDEDDEDIFTVKKPTGEPEQIKEEEAAEKISNIT----ISKTKPL 592
Query: 296 KINVHRPLGTRLVFDEEC--NTVPPLAMLADTKNANVSLDQDQKTEY---YKKIREELKR 350
K V + + + +++ NT D + + T Y +K R+E+K
Sbjct: 593 KKAVTKVSAAKKILNKKLKVNTKKTFGA-EDDELEELEEGPSTITSYGLDIEKARQEIKS 651
Query: 351 AD 352
D
Sbjct: 652 GD 653
>UNIPROTKB|I3L840 [details] [associations]
symbol:DDX18 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313 Pfam:PF13959
GeneTree:ENSGT00680000100037 EMBL:CU406995
Ensembl:ENSSSCT00000025310 Uniprot:I3L840
Length = 667
Score = 400 (145.9 bits), Expect = 1.1e-36, P = 1.1e-36
Identities = 81/231 (35%), Positives = 139/231 (60%)
Query: 1 MIVPLEQKLDMLWSFIKAHLNSKILVFLTSCKQVKYVFEAFKKLRPGIPLMCLYGRMKQD 60
++ P E++ +L++F+K + K++VF +SCK VKY +E + +P++ ++GR KQ+
Sbjct: 402 VVCPSEKRFLLLFTFLKKNRKKKLMVFFSSCKSVKYHYELLNYI--DLPVLAIHGRQKQN 459
Query: 61 RRMAIYAQFCEKRS-VLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTAR-YN 118
+R + QFC S +L CTDVA+RGLD + VDW+VQ D P+D YIHRVGRTAR N
Sbjct: 460 KRTTTFFQFCNADSGILLCTDVAARGLDIPE-VDWIVQYDPPDDPKEYIHRVGRTARGLN 518
Query: 119 SGGRSVLFLTPTEMKMLEKLREAKIPIHFTKANTKRLQPVSGLLAALLVKYPDMQHRAQK 178
G ++L L P E+ L L+++K+P+ + + ++ + L L+ K + AQ+
Sbjct: 519 GRGHALLILRPEELGFLRYLKQSKVPLSEFEFSWSKISDIQSQLEKLIEKNYFLHKSAQE 578
Query: 179 AFITYLRSVHIQKDKEVFDVTKLSIDEFSASLGLPMTPKIRF-LNQKKGKM 228
A+ +Y+R+ K++F+V L++ + + S G + P + +N GK+
Sbjct: 579 AYKSYIRAYDSHSLKQIFNVNNLNLPQVALSFGFKVPPFVDLNVNSNDGKV 629
>UNIPROTKB|E2RFA3 [details] [associations]
symbol:DDX18 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313
Pfam:PF13959 KO:K13179 OMA:KDGYRSY GeneTree:ENSGT00680000100037
CTD:8886 EMBL:AAEX03011884 RefSeq:XP_533327.3
Ensembl:ENSCAFT00000007958 GeneID:476120 KEGG:cfa:476120
Uniprot:E2RFA3
Length = 669
Score = 400 (145.9 bits), Expect = 1.1e-36, P = 1.1e-36
Identities = 81/231 (35%), Positives = 139/231 (60%)
Query: 1 MIVPLEQKLDMLWSFIKAHLNSKILVFLTSCKQVKYVFEAFKKLRPGIPLMCLYGRMKQD 60
++ P E++ +L++F+K + K++VF +SCK VKY +E + +P++ ++GR KQ+
Sbjct: 404 VVCPSEKRFLLLFTFLKKNRKKKLMVFFSSCKSVKYHYELLNYI--DLPVLAIHGRQKQN 461
Query: 61 RRMAIYAQFCEKRS-VLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTAR-YN 118
+R + QFC S +L CTDVA+RGLD + VDW+VQ D P+D YIHRVGRTAR N
Sbjct: 462 KRTTTFFQFCNADSGILLCTDVAARGLDIPE-VDWIVQYDPPDDPKEYIHRVGRTARGLN 520
Query: 119 SGGRSVLFLTPTEMKMLEKLREAKIPIHFTKANTKRLQPVSGLLAALLVKYPDMQHRAQK 178
G ++L L P E+ L L+++K+P+ + + ++ + L L+ K + AQ+
Sbjct: 521 GRGHALLILHPEELGFLRYLKQSKVPLSEFEFSWSKISDIQSQLEKLIEKNYFLHKSAQE 580
Query: 179 AFITYLRSVHIQKDKEVFDVTKLSIDEFSASLGLPMTPKIRF-LNQKKGKM 228
A+ +Y+R+ K++F+V L++ + + S G + P + +N GK+
Sbjct: 581 AYKSYIRAYDSHSLKQIFNVNNLNLPQVALSFGFKVPPFVDLNVNSNDGKL 631
>UNIPROTKB|F1RY13 [details] [associations]
symbol:DDX18 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313 Pfam:PF13959
OMA:KDGYRSY GeneTree:ENSGT00680000100037 EMBL:CU406995
Ensembl:ENSSSCT00000017112 Uniprot:F1RY13
Length = 671
Score = 400 (145.9 bits), Expect = 1.2e-36, P = 1.2e-36
Identities = 81/231 (35%), Positives = 139/231 (60%)
Query: 1 MIVPLEQKLDMLWSFIKAHLNSKILVFLTSCKQVKYVFEAFKKLRPGIPLMCLYGRMKQD 60
++ P E++ +L++F+K + K++VF +SCK VKY +E + +P++ ++GR KQ+
Sbjct: 406 VVCPSEKRFLLLFTFLKKNRKKKLMVFFSSCKSVKYHYELLNYI--DLPVLAIHGRQKQN 463
Query: 61 RRMAIYAQFCEKRS-VLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTAR-YN 118
+R + QFC S +L CTDVA+RGLD + VDW+VQ D P+D YIHRVGRTAR N
Sbjct: 464 KRTTTFFQFCNADSGILLCTDVAARGLDIPE-VDWIVQYDPPDDPKEYIHRVGRTARGLN 522
Query: 119 SGGRSVLFLTPTEMKMLEKLREAKIPIHFTKANTKRLQPVSGLLAALLVKYPDMQHRAQK 178
G ++L L P E+ L L+++K+P+ + + ++ + L L+ K + AQ+
Sbjct: 523 GRGHALLILRPEELGFLRYLKQSKVPLSEFEFSWSKISDIQSQLEKLIEKNYFLHKSAQE 582
Query: 179 AFITYLRSVHIQKDKEVFDVTKLSIDEFSASLGLPMTPKIRF-LNQKKGKM 228
A+ +Y+R+ K++F+V L++ + + S G + P + +N GK+
Sbjct: 583 AYKSYIRAYDSHSLKQIFNVNNLNLPQVALSFGFKVPPFVDLNVNSNDGKV 633
>UNIPROTKB|I3L7B7 [details] [associations]
symbol:DDX18 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005730 "nucleolus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005730 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313 Pfam:PF13959
GeneTree:ENSGT00680000100037 EMBL:CU406995
Ensembl:ENSSSCT00000025125 Uniprot:I3L7B7
Length = 696
Score = 400 (145.9 bits), Expect = 1.4e-36, P = 1.4e-36
Identities = 81/231 (35%), Positives = 139/231 (60%)
Query: 1 MIVPLEQKLDMLWSFIKAHLNSKILVFLTSCKQVKYVFEAFKKLRPGIPLMCLYGRMKQD 60
++ P E++ +L++F+K + K++VF +SCK VKY +E + +P++ ++GR KQ+
Sbjct: 431 VVCPSEKRFLLLFTFLKKNRKKKLMVFFSSCKSVKYHYELLNYI--DLPVLAIHGRQKQN 488
Query: 61 RRMAIYAQFCEKRS-VLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTAR-YN 118
+R + QFC S +L CTDVA+RGLD + VDW+VQ D P+D YIHRVGRTAR N
Sbjct: 489 KRTTTFFQFCNADSGILLCTDVAARGLDIPE-VDWIVQYDPPDDPKEYIHRVGRTARGLN 547
Query: 119 SGGRSVLFLTPTEMKMLEKLREAKIPIHFTKANTKRLQPVSGLLAALLVKYPDMQHRAQK 178
G ++L L P E+ L L+++K+P+ + + ++ + L L+ K + AQ+
Sbjct: 548 GRGHALLILRPEELGFLRYLKQSKVPLSEFEFSWSKISDIQSQLEKLIEKNYFLHKSAQE 607
Query: 179 AFITYLRSVHIQKDKEVFDVTKLSIDEFSASLGLPMTPKIRF-LNQKKGKM 228
A+ +Y+R+ K++F+V L++ + + S G + P + +N GK+
Sbjct: 608 AYKSYIRAYDSHSLKQIFNVNNLNLPQVALSFGFKVPPFVDLNVNSNDGKV 658
>UNIPROTKB|F1N533 [details] [associations]
symbol:DDX18 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313 Pfam:PF13959
GeneTree:ENSGT00680000100037 EMBL:DAAA02005160 IPI:IPI00904747
Ensembl:ENSBTAT00000045489 OMA:TENKGES Uniprot:F1N533
Length = 670
Score = 399 (145.5 bits), Expect = 1.5e-36, P = 1.5e-36
Identities = 81/231 (35%), Positives = 139/231 (60%)
Query: 1 MIVPLEQKLDMLWSFIKAHLNSKILVFLTSCKQVKYVFEAFKKLRPGIPLMCLYGRMKQD 60
++ P E++ +L++F+K + K++VF +SCK VKY +E + +P++ ++GR KQ+
Sbjct: 405 VVCPSEKRFLLLFTFLKKNRKKKLMVFFSSCKSVKYHYELLNYI--DLPVLAIHGRQKQN 462
Query: 61 RRMAIYAQFCEKRS-VLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTAR-YN 118
+R + QFC S +L CTDVA+RGLD + VDW+VQ D P+D YIHRVGRTAR N
Sbjct: 463 KRTTTFFQFCNADSGILLCTDVAARGLDIPE-VDWIVQYDPPDDPKEYIHRVGRTARGLN 521
Query: 119 SGGRSVLFLTPTEMKMLEKLREAKIPIHFTKANTKRLQPVSGLLAALLVKYPDMQHRAQK 178
G ++L L P E+ L L+++K+P+ + + ++ + L L+ K + AQ+
Sbjct: 522 GRGHALLILRPEELGFLRYLKQSKVPLSEFEFSWSKISDIQSQLEKLIEKNYFLHKSAQE 581
Query: 179 AFITYLRSVHIQKDKEVFDVTKLSIDEFSASLGLPMTPKIRF-LNQKKGKM 228
A+ +Y+R+ K++F+V L++ + + S G + P + +N GK+
Sbjct: 582 AYKSYIRAYDSHSLKQIFNVNNLNLPQVALSFGFKVPPFVDLNVNTNDGKV 632
>UNIPROTKB|F1MSX0 [details] [associations]
symbol:F1MSX0 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313 Pfam:PF13959
OMA:KDGYRSY GeneTree:ENSGT00680000100037 EMBL:DAAA02009745
IPI:IPI00903923 Ensembl:ENSBTAT00000039166 Uniprot:F1MSX0
Length = 674
Score = 399 (145.5 bits), Expect = 1.5e-36, P = 1.5e-36
Identities = 81/231 (35%), Positives = 139/231 (60%)
Query: 1 MIVPLEQKLDMLWSFIKAHLNSKILVFLTSCKQVKYVFEAFKKLRPGIPLMCLYGRMKQD 60
++ P E++ +L++F+K + K++VF +SCK VKY +E + +P++ ++GR KQ+
Sbjct: 409 VVCPSEKRFLLLFTFLKKNRKKKLMVFFSSCKSVKYHYELLNYI--DLPVLAIHGRQKQN 466
Query: 61 RRMAIYAQFCEKRS-VLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTAR-YN 118
+R + QFC S +L CTDVA+RGLD + VDW+VQ D P+D YIHRVGRTAR N
Sbjct: 467 KRTTTFFQFCNADSGILLCTDVAARGLDIPE-VDWIVQYDPPDDPKEYIHRVGRTARGLN 525
Query: 119 SGGRSVLFLTPTEMKMLEKLREAKIPIHFTKANTKRLQPVSGLLAALLVKYPDMQHRAQK 178
G ++L L P E+ L L+++K+P+ + + ++ + L L+ K + AQ+
Sbjct: 526 GRGHALLILRPEELGFLRYLKQSKVPLSEFEFSWSKISDIQSQLEKLIEKNYFLHKSAQE 585
Query: 179 AFITYLRSVHIQKDKEVFDVTKLSIDEFSASLGLPMTPKIRF-LNQKKGKM 228
A+ +Y+R+ K++F+V L++ + + S G + P + +N GK+
Sbjct: 586 AYKSYIRAYDSHSLKQIFNVNNLNLPQVALSFGFKVPPFVDLNVNTNDGKV 636
>SGD|S000004903 [details] [associations]
symbol:HAS1 "ATP-dependent RNA helicase" species:4932
"Saccharomyces cerevisiae" [GO:0008186 "RNA-dependent ATPase
activity" evidence=IDA] [GO:0030687 "preribosome, large subunit
precursor" evidence=IDA] [GO:0003723 "RNA binding"
evidence=IEA;IDA] [GO:0005730 "nucleolus" evidence=IEA;IDA]
[GO:0005635 "nuclear envelope" evidence=IDA] [GO:0006364 "rRNA
processing" evidence=IEA;IMP] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0030686 "90S preribosome"
evidence=IDA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 SGD:S000004903 GO:GO:0005524
GO:GO:0005635 GO:GO:0005730 GO:GO:0003723 EMBL:BK006946
GO:GO:0030687 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0030686 GO:GO:0006364 GO:GO:0004004 EMBL:X80836
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
InterPro:IPR025313 Pfam:PF13959 HOGENOM:HOG000268799 KO:K13179
OMA:KDGYRSY GeneTree:ENSGT00680000100037 OrthoDB:EOG4ZKNVS
PIR:S47451 RefSeq:NP_014017.1 ProteinModelPortal:Q03532 SMR:Q03532
DIP:DIP-4396N IntAct:Q03532 MINT:MINT-482816 STRING:Q03532
PaxDb:Q03532 PeptideAtlas:Q03532 EnsemblFungi:YMR290C GeneID:855335
KEGG:sce:YMR290C CYGD:YMR290c NextBio:979064 Genevestigator:Q03532
GermOnline:YMR290C Uniprot:Q03532
Length = 505
Score = 388 (141.6 bits), Expect = 5.7e-36, P = 5.7e-36
Identities = 81/224 (36%), Positives = 131/224 (58%)
Query: 6 EQKLDMLWSFIKAHLNSKILVFLTSCKQVKYVFEAFKKLRPGIPLMCLYGRMKQDRRMAI 65
+++ +L+SF+K + KI+VFL+SC VKY E + +P++ L+G+ KQ +R
Sbjct: 274 DKRFLLLFSFLKRNQKKKIIVFLSSCNSVKYYAELLNYI--DLPVLELHGKQKQQKRTNT 331
Query: 66 YAQFCE-KRSVLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYNSG-GRS 123
+ +FC +R +L CTDVA+RGLD AVDW++Q D P+D YIHRVGRTAR G G+S
Sbjct: 332 FFEFCNAERGILICTDVAARGLDI-PAVDWIIQFDPPDDPRDYIHRVGRTARGTKGKGKS 390
Query: 124 VLFLTPTEMKMLEKLREAKIPIHFTKANTKRLQPVSGLLAALLVKYPDMQHRAQKAFITY 183
++FLTP E+ L L+ +K+P++ + ++ V L L+ + A+ + +Y
Sbjct: 391 LMFLTPNELGFLRYLKASKVPLNEYEFPENKIANVQSQLEKLIKSNYYLHQTAKDGYRSY 450
Query: 184 LRSVHIQKDKEVFDVTKLSIDEFSASLGLPMTPKIRFLNQKKGK 227
L++ K V+ + KL + + + S G P+ PK+ GK
Sbjct: 451 LQAYASHSLKTVYQIDKLDLAKVAKSYGFPVPPKVNITIGASGK 494
>CGD|CAL0003050 [details] [associations]
symbol:HAS1 species:5476 "Candida albicans" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=IGI;ISS] [GO:0042274
"ribosomal small subunit biogenesis" evidence=IGI;ISS] [GO:0030686
"90S preribosome" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0005635 "nuclear envelope" evidence=IEA]
[GO:0030687 "preribosome, large subunit precursor" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 CGD:CAL0003050 GO:GO:0005524
GO:GO:0005730 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006364 GO:GO:0004004 GO:GO:0042274
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 EMBL:AACQ01000012
InterPro:IPR025313 Pfam:PF13959 KO:K13179 EMBL:AACQ01000011
RefSeq:XP_721871.1 RefSeq:XP_722031.1 STRING:Q5AK59 GeneID:3636361
GeneID:3636443 KEGG:cal:CaO19.11444 KEGG:cal:CaO19.3962
Uniprot:Q5AK59
Length = 565
Score = 387 (141.3 bits), Expect = 8.7e-36, P = 8.7e-36
Identities = 80/215 (37%), Positives = 130/215 (60%)
Query: 6 EQKLDMLWSFIKAHLNSKILVFLTSCKQVKYVFEAFKKLRPGIPLMCLYGRMKQDRRMAI 65
+++ +L+SF+K ++ KI+VFL+SC VK+ E + +P++ L+G+ KQ +R
Sbjct: 339 DKRFLLLFSFLKRNVKKKIIVFLSSCNSVKFYSELLNYI--DLPVLDLHGKQKQQKRTNT 396
Query: 66 YAQFCE-KRSVLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYNSG-GRS 123
+ +FC K+ +L CTDVA+RGLD AVDW+VQ D P+D YIHRVGRTAR G G+S
Sbjct: 397 FFEFCNAKQGILVCTDVAARGLDI-PAVDWIVQFDPPDDPRDYIHRVGRTARGTQGKGKS 455
Query: 124 VLFLTPTEMKMLEKLREAKIPIHFTKANTKRLQPVSGLLAALLVKYPDMQHRAQKAFITY 183
++FLTP+E+ L L+ AK+P++ + ++ + L L+ + A+ + Y
Sbjct: 456 LMFLTPSELGFLRYLKAAKVPLNEYEFPANKIANIQSQLTKLIKTNYLLNQSAKDGYRAY 515
Query: 184 LRSVHIQKDKEVFDVTKLSIDEFSASLGLPMTPKI 218
L++ K V+ + KL + + SAS GL P++
Sbjct: 516 LQAYASHGLKTVYQIDKLDLKKVSASFGLDQVPRV 550
>UNIPROTKB|Q5AK59 [details] [associations]
symbol:HAS1 "ATP-dependent RNA helicase HAS1"
species:237561 "Candida albicans SC5314" [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=IGI] [GO:0042274 "ribosomal small
subunit biogenesis" evidence=IGI] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 CGD:CAL0003050
GO:GO:0005524 GO:GO:0005730 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0004004
GO:GO:0042274 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
EMBL:AACQ01000012 InterPro:IPR025313 Pfam:PF13959 KO:K13179
EMBL:AACQ01000011 RefSeq:XP_721871.1 RefSeq:XP_722031.1
STRING:Q5AK59 GeneID:3636361 GeneID:3636443 KEGG:cal:CaO19.11444
KEGG:cal:CaO19.3962 Uniprot:Q5AK59
Length = 565
Score = 387 (141.3 bits), Expect = 8.7e-36, P = 8.7e-36
Identities = 80/215 (37%), Positives = 130/215 (60%)
Query: 6 EQKLDMLWSFIKAHLNSKILVFLTSCKQVKYVFEAFKKLRPGIPLMCLYGRMKQDRRMAI 65
+++ +L+SF+K ++ KI+VFL+SC VK+ E + +P++ L+G+ KQ +R
Sbjct: 339 DKRFLLLFSFLKRNVKKKIIVFLSSCNSVKFYSELLNYI--DLPVLDLHGKQKQQKRTNT 396
Query: 66 YAQFCE-KRSVLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYNSG-GRS 123
+ +FC K+ +L CTDVA+RGLD AVDW+VQ D P+D YIHRVGRTAR G G+S
Sbjct: 397 FFEFCNAKQGILVCTDVAARGLDI-PAVDWIVQFDPPDDPRDYIHRVGRTARGTQGKGKS 455
Query: 124 VLFLTPTEMKMLEKLREAKIPIHFTKANTKRLQPVSGLLAALLVKYPDMQHRAQKAFITY 183
++FLTP+E+ L L+ AK+P++ + ++ + L L+ + A+ + Y
Sbjct: 456 LMFLTPSELGFLRYLKAAKVPLNEYEFPANKIANIQSQLTKLIKTNYLLNQSAKDGYRAY 515
Query: 184 LRSVHIQKDKEVFDVTKLSIDEFSASLGLPMTPKI 218
L++ K V+ + KL + + SAS GL P++
Sbjct: 516 LQAYASHGLKTVYQIDKLDLKKVSASFGLDQVPRV 550
>POMBASE|SPAC1F7.02c [details] [associations]
symbol:has1 "ATP-dependent RNA helicase Has1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=ISO] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0006364 "rRNA processing" evidence=ISO]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 PomBase:SPAC1F7.02c GO:GO:0005524 EMBL:CU329670
GO:GO:0005730 GenomeReviews:CU329670_GR GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
InterPro:IPR025313 Pfam:PF13959 HOGENOM:HOG000268799 KO:K13179
OMA:KDGYRSY OrthoDB:EOG4ZKNVS PIR:S62574 RefSeq:NP_594488.1
ProteinModelPortal:Q09916 STRING:Q09916 EnsemblFungi:SPAC1F7.02c.1
GeneID:2541668 KEGG:spo:SPAC1F7.02c NextBio:20802761 Uniprot:Q09916
Length = 578
Score = 385 (140.6 bits), Expect = 2.0e-35, P = 2.0e-35
Identities = 80/229 (34%), Positives = 135/229 (58%)
Query: 1 MIVPLEQKLDMLWSFIKAHLNSKILVFLTSCKQVKYVFEAFKKLRPGIPLMCLYGRMKQD 60
++V +++ +L+SF+K +L K++VF++SC VKY+ E + +P++ L+G+ KQ
Sbjct: 316 VVVDSDKRFLLLFSFLKRNLKKKVIVFMSSCASVKYMAELLNYI--DLPVLDLHGKQKQQ 373
Query: 61 RRMAIYAQFCE-KRSVLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYNS 119
RR + +FC ++ +L CT+VA+RGLD AVDW+VQ D P+D YIHRVGRTAR
Sbjct: 374 RRTNTFFEFCNAEKGILLCTNVAARGLDI-PAVDWIVQYDPPDDPRDYIHRVGRTARGTK 432
Query: 120 G-GRSVLFLTPTEMKMLEKLREAKIPIHFTKANTKRLQPVSGLLAALLVKYPDMQHRAQK 178
G G+S++FL P+E+ L L+ AK+ ++ + ++ V L L+ K +Q A+
Sbjct: 433 GTGKSLMFLAPSELGFLRYLKTAKVSLNEFEFPANKVANVQSQLEKLVSKNYYLQQSAKD 492
Query: 179 AFITYLRSVHIQKDKEVFDVTKLSIDEFSASLGLPMTPKIRFLNQKKGK 227
+ +YL++ K +FD+ KL + + + S G P + G+
Sbjct: 493 GYRSYLQAYASYSLKSIFDINKLDLAKVAKSFGFAHPPNVNITIGASGR 541
>ASPGD|ASPL0000044206 [details] [associations]
symbol:AN1949 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0030686 "90S
preribosome" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005635 "nuclear envelope" evidence=IEA] [GO:0030687
"preribosome, large subunit precursor" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005730 EMBL:BN001307
GO:GO:0003723 EMBL:AACD01000029 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313 Pfam:PF13959
HOGENOM:HOG000268799 KO:K13179 OMA:KDGYRSY RefSeq:XP_659553.1
ProteinModelPortal:Q5BBY1 STRING:Q5BBY1
EnsemblFungi:CADANIAT00008609 GeneID:2875602 KEGG:ani:AN1949.2
OrthoDB:EOG4ZKNVS Uniprot:Q5BBY1
Length = 609
Score = 385 (140.6 bits), Expect = 3.1e-35, P = 3.1e-35
Identities = 84/220 (38%), Positives = 133/220 (60%)
Query: 1 MIVPLEQKLDMLWSFIKAHLNSKILVFLTSCKQVKYVFEAFKKLRPGIPLMCLYGRMKQD 60
+I +++ +L+SF+K +L KI+VF +SC VKY E + +P++ L+G+ KQ
Sbjct: 355 VICEADKRFLLLFSFLKRNLKKKIIVFFSSCNCVKYHAELLNYI--DLPVLDLHGKQKQQ 412
Query: 61 RRMAIYAQFCE-KRSVLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYNS 119
+R + +FC K+ VL CTDVA+RGLD AVDW++Q D P+D YIHRVGRTAR +
Sbjct: 413 KRTNTFFEFCNAKQGVLICTDVAARGLDI-PAVDWIIQFDPPDDTRDYIHRVGRTARGAN 471
Query: 120 G-GRSVLFLTPTEMKMLEKLREAKIPIHFTKANTKRLQPVSGLLAALLVKYPDMQHRAQK 178
G GRS++FL P+E+ L+ L+EA++P+ K++ V L L+ + + A+
Sbjct: 472 GRGRSLMFLQPSEVGFLKYLKEARVPVVEFDFPAKKIVNVQSQLEKLISQNYYLNKSAKD 531
Query: 179 AFITYLRSVHIQKDKEVFDVTKLSIDEFSASLGLPMTPKI 218
+ +YL++ + VFDV KL + + + S G P+I
Sbjct: 532 GYRSYLQAYASHSLRSVFDVHKLDLVKVAKSFGFSTPPRI 571
>UNIPROTKB|Q9NVP1 [details] [associations]
symbol:DDX18 "ATP-dependent RNA helicase DDX18"
species:9606 "Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=TAS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005730 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
InterPro:IPR025313 Pfam:PF13959 HOGENOM:HOG000268799 KO:K13179
OMA:KDGYRSY EMBL:AK001467 EMBL:BC001238 EMBL:BC003360 EMBL:BC024739
EMBL:X98743 EMBL:CR457060 IPI:IPI00301323 PIR:S71758
RefSeq:NP_006764.3 UniGene:Hs.363492 PDB:3LY5 PDBsum:3LY5
ProteinModelPortal:Q9NVP1 SMR:Q9NVP1 IntAct:Q9NVP1
MINT:MINT-1382348 STRING:Q9NVP1 PhosphoSite:Q9NVP1 DMDM:20532388
SWISS-2DPAGE:Q9NVP1 PaxDb:Q9NVP1 PeptideAtlas:Q9NVP1 PRIDE:Q9NVP1
Ensembl:ENST00000263239 GeneID:8886 KEGG:hsa:8886 UCSC:uc002tlh.1
CTD:8886 GeneCards:GC02P118572 HGNC:HGNC:2741 HPA:HPA035400
MIM:606355 neXtProt:NX_Q9NVP1 PharmGKB:PA27207 HOVERGEN:HBG105702
InParanoid:Q9NVP1 OrthoDB:EOG4894MF PhylomeDB:Q9NVP1
ChEMBL:CHEMBL5060 ChiTaRS:DDX18 EvolutionaryTrace:Q9NVP1
GenomeRNAi:8886 NextBio:33369 ArrayExpress:Q9NVP1 Bgee:Q9NVP1
CleanEx:HS_DDX18 Genevestigator:Q9NVP1 GermOnline:ENSG00000088205
Uniprot:Q9NVP1
Length = 670
Score = 387 (141.3 bits), Expect = 3.1e-35, P = 3.1e-35
Identities = 79/230 (34%), Positives = 136/230 (59%)
Query: 1 MIVPLEQKLDMLWSFIKAHLNSKILVFLTSCKQVKYVFEAFKKLRPGIPLMCLYGRMKQD 60
++ P E++ +L++F+K + K++VF +SC VKY +E + +P++ ++G+ KQ+
Sbjct: 405 VVCPSEKRFLLLFTFLKKNRKKKLMVFFSSCMSVKYHYELLNYI--DLPVLAIHGKQKQN 462
Query: 61 RRMAIYAQFCEKRS-VLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTAR-YN 118
+R + QFC S L CTDVA+RGLD + VDW+VQ D P+D YIHRVGRTAR N
Sbjct: 463 KRTTTFFQFCNADSGTLLCTDVAARGLDIPE-VDWIVQYDPPDDPKEYIHRVGRTARGLN 521
Query: 119 SGGRSVLFLTPTEMKMLEKLREAKIPIHFTKANTKRLQPVSGLLAALLVKYPDMQHRAQK 178
G ++L L P E+ L L+++K+P+ + ++ + L L+ K + AQ+
Sbjct: 522 GRGHALLILRPEELGFLRYLKQSKVPLSEFDFSWSKISDIQSQLEKLIEKNYFLHKSAQE 581
Query: 179 AFITYLRSVHIQKDKEVFDVTKLSIDEFSASLGLPMTPKIRF-LNQKKGK 227
A+ +Y+R+ K++F+V L++ + + S G + P + +N +GK
Sbjct: 582 AYKSYIRAYDSHSLKQIFNVNNLNLPQVALSFGFKVPPFVDLNVNSNEGK 631
>MGI|MGI:1914192 [details] [associations]
symbol:Ddx18 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 18"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005730 "nucleolus"
evidence=ISO] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:1914192
GO:GO:0005524 GO:GO:0005730 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313 Pfam:PF13959
HOGENOM:HOG000268799 KO:K13179 OMA:KDGYRSY
GeneTree:ENSGT00680000100037 CTD:8886 HOVERGEN:HBG105702
OrthoDB:EOG4894MF EMBL:AK075864 EMBL:AK019845 EMBL:BC028246
EMBL:BC103776 IPI:IPI00459381 RefSeq:NP_080136.2 UniGene:Mm.44219
ProteinModelPortal:Q8K363 SMR:Q8K363 STRING:Q8K363
PhosphoSite:Q8K363 PaxDb:Q8K363 PRIDE:Q8K363
Ensembl:ENSMUST00000001724 GeneID:66942 KEGG:mmu:66942
InParanoid:Q8K363 NextBio:323084 Bgee:Q8K363 CleanEx:MM_DDX18
Genevestigator:Q8K363 GermOnline:ENSMUSG00000001674 Uniprot:Q8K363
Length = 660
Score = 386 (140.9 bits), Expect = 3.8e-35, P = 3.8e-35
Identities = 78/231 (33%), Positives = 138/231 (59%)
Query: 1 MIVPLEQKLDMLWSFIKAHLNSKILVFLTSCKQVKYVFEAFKKLRPGIPLMCLYGRMKQD 60
++ P E++ +L++F+K + K++VF +SC VKY +E + +P++ ++G+ KQ+
Sbjct: 395 VVCPSEKRFLLLFTFLKKNRKKKVMVFFSSCMSVKYHYELLNYI--DLPVLAIHGKQKQN 452
Query: 61 RRMAIYAQFCEKRS-VLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTAR-YN 118
+R + QFC S +L CTDVA+RGLD + VDW+VQ D P+D YIHRVGRTAR N
Sbjct: 453 KRTTTFFQFCNADSGILLCTDVAARGLDIPE-VDWIVQYDPPDDPKEYIHRVGRTARGLN 511
Query: 119 SGGRSVLFLTPTEMKMLEKLREAKIPIHFTKANTKRLQPVSGLLAALLVKYPDMQHRAQK 178
G ++L L P E+ L L+++K+P++ + ++ + L L+ K + AQ+
Sbjct: 512 GRGHALLILRPEELGFLRYLKQSKVPLNQFDFSWSKVSDIQSQLEKLIEKNYFLHKSAQE 571
Query: 179 AFITYLRSVHIQKDKEVFDVTKLSIDEFSASLGLPMTPKIRF-LNQKKGKM 228
A+ +Y+R+ K++F+V L++ + + S G + P + ++ GK+
Sbjct: 572 AYKSYIRAYDSHSLKQIFNVNNLNLPQVALSFGFKVPPFVDLNVSSHDGKL 622
>UNIPROTKB|D4A824 [details] [associations]
symbol:Ddx18 "Protein Ddx18" species:10116 "Rattus
norvegicus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 RGD:1549712 GO:GO:0005524 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313 Pfam:PF13959
EMBL:AC128353 IPI:IPI00393022 Ensembl:ENSRNOT00000028172
ArrayExpress:D4A824 Uniprot:D4A824
Length = 662
Score = 386 (140.9 bits), Expect = 3.8e-35, P = 3.8e-35
Identities = 78/231 (33%), Positives = 138/231 (59%)
Query: 1 MIVPLEQKLDMLWSFIKAHLNSKILVFLTSCKQVKYVFEAFKKLRPGIPLMCLYGRMKQD 60
++ P E++ +L++F+K + K++VF +SC VKY +E + +P++ ++G+ KQ+
Sbjct: 397 VVCPSEKRFLLLFTFLKKNRKKKVMVFFSSCMSVKYHYELLNYI--DLPVLAIHGKQKQN 454
Query: 61 RRMAIYAQFCEKRS-VLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTAR-YN 118
+R + QFC S +L CTDVA+RGLD + VDW+VQ D P+D YIHRVGRTAR N
Sbjct: 455 KRTTTFFQFCNADSGILLCTDVAARGLDIPE-VDWIVQYDPPDDPKEYIHRVGRTARGLN 513
Query: 119 SGGRSVLFLTPTEMKMLEKLREAKIPIHFTKANTKRLQPVSGLLAALLVKYPDMQHRAQK 178
G ++L L P E+ L L+++K+P++ + ++ + L L+ K + AQ+
Sbjct: 514 GRGHALLILRPEELGFLRYLKQSKVPLNQFDFSWSKVSDIQSQLEKLIEKNYFLHKSAQE 573
Query: 179 AFITYLRSVHIQKDKEVFDVTKLSIDEFSASLGLPMTPKIRF-LNQKKGKM 228
A+ +Y+R+ K++F+V L++ + + S G + P + ++ GK+
Sbjct: 574 AYKSYIRAYDSHSLKQIFNVNNLNLPQVALSFGFKVPPFVDLNVSSHDGKL 624
>RGD|1549712 [details] [associations]
symbol:Ddx18 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 18"
species:10116 "Rattus norvegicus" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA;ISO] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 RGD:1549712 GO:GO:0005524
GO:GO:0005730 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 InterPro:IPR025313 Pfam:PF13959
HOGENOM:HOG000268799 KO:K13179 OMA:KDGYRSY
GeneTree:ENSGT00680000100037 CTD:8886 HOVERGEN:HBG105702
OrthoDB:EOG4894MF EMBL:AC128353 EMBL:BC083919 IPI:IPI00367078
RefSeq:NP_001006997.1 UniGene:Rn.26598 STRING:Q5XHY0
Ensembl:ENSRNOT00000037203 GeneID:308490 KEGG:rno:308490
UCSC:RGD:1549712 InParanoid:Q5XHY0 NextBio:658990
Genevestigator:Q5XHY0 Uniprot:Q5XHY0
Length = 674
Score = 386 (140.9 bits), Expect = 4.1e-35, P = 4.1e-35
Identities = 78/231 (33%), Positives = 138/231 (59%)
Query: 1 MIVPLEQKLDMLWSFIKAHLNSKILVFLTSCKQVKYVFEAFKKLRPGIPLMCLYGRMKQD 60
++ P E++ +L++F+K + K++VF +SC VKY +E + +P++ ++G+ KQ+
Sbjct: 409 VVCPSEKRFLLLFTFLKKNRKKKVMVFFSSCMSVKYHYELLNYI--DLPVLAIHGKQKQN 466
Query: 61 RRMAIYAQFCEKRS-VLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTAR-YN 118
+R + QFC S +L CTDVA+RGLD + VDW+VQ D P+D YIHRVGRTAR N
Sbjct: 467 KRTTTFFQFCNADSGILLCTDVAARGLDIPE-VDWIVQYDPPDDPKEYIHRVGRTARGLN 525
Query: 119 SGGRSVLFLTPTEMKMLEKLREAKIPIHFTKANTKRLQPVSGLLAALLVKYPDMQHRAQK 178
G ++L L P E+ L L+++K+P++ + ++ + L L+ K + AQ+
Sbjct: 526 GRGHALLILRPEELGFLRYLKQSKVPLNQFDFSWSKVSDIQSQLEKLIEKNYFLHKSAQE 585
Query: 179 AFITYLRSVHIQKDKEVFDVTKLSIDEFSASLGLPMTPKIRF-LNQKKGKM 228
A+ +Y+R+ K++F+V L++ + + S G + P + ++ GK+
Sbjct: 586 AYKSYIRAYDSHSLKQIFNVNNLNLPQVALSFGFKVPPFVDLNVSSHDGKL 636
>WB|WBGene00015232 [details] [associations]
symbol:B0511.6 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] [GO:0043652 "engulfment of apoptotic cell"
evidence=IMP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0008340
GO:GO:0040007 GO:GO:0002119 GO:GO:0003723 GO:GO:0043652
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
InterPro:IPR025313 Pfam:PF13959 HOGENOM:HOG000268799 KO:K13179
OMA:KDGYRSY GeneTree:ENSGT00680000100037 HSSP:P10081 EMBL:FO080219
PIR:T33113 RefSeq:NP_492779.1 ProteinModelPortal:O61815 SMR:O61815
DIP:DIP-27278N MINT:MINT-1068292 STRING:O61815 PaxDb:O61815
EnsemblMetazoa:B0511.6.1 EnsemblMetazoa:B0511.6.2 GeneID:172954
KEGG:cel:CELE_B0511.6 UCSC:B0511.6.1 CTD:172954 WormBase:B0511.6
InParanoid:O61815 NextBio:877669 Uniprot:O61815
Length = 544
Score = 373 (136.4 bits), Expect = 2.5e-34, P = 2.5e-34
Identities = 82/240 (34%), Positives = 137/240 (57%)
Query: 1 MIVPLEQKLDMLWSFIKAHLNSKILVFLTSCKQVKYVFEAFKKLRPGIPLMCLYGRMKQD 60
++ P +++L +L++F+K + K++VF +SC VK+ E + IP M ++G+ KQ
Sbjct: 294 IVAPSDKRLLLLFTFLKKNKTKKVMVFFSSCNSVKFHHELLNYI--DIPCMSIHGKQKQQ 351
Query: 61 RRMAIYAQFCEKRS-VLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYNS 119
+R + QFC+ + +L CTDVA+RGLD AVDW+VQ D ++ YIHRVGRTAR +
Sbjct: 352 KRTTTFFQFCQAETGILLCTDVAARGLDI-PAVDWIVQYDPTDEPREYIHRVGRTARGTN 410
Query: 120 G-GRSVLFLTPTEMKMLEKLREAKIPIHFTKANTKRLQPVSGLLAALLVKYPDMQHRAQK 178
G G+++L L P E+ L L+ AK+ ++ + + ++ + L L+ K + A++
Sbjct: 411 GSGKALLVLRPEELGFLRYLKAAKVTLNEFEFSWSKVANIQSQLENLISKNYYLNKSAKE 470
Query: 179 AFITYLRSVHIQKDKEVFDVTKLSIDEFSASLGLPMTPKIRFLNQKKGKMVPVKPVLDNA 238
A+ YLR+ K++FDVT + + S S G + P + K K V ++ L A
Sbjct: 471 AYKCYLRAYDSHSLKDIFDVTNMDLTAVSKSFGFSVPPFVDLPISNKPK-VEIRSKLSGA 529
>UNIPROTKB|F1NEQ3 [details] [associations]
symbol:DDX18 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005730 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313 Pfam:PF13959
OMA:KDGYRSY GeneTree:ENSGT00680000100037 EMBL:AADN02016926
IPI:IPI00598837 Ensembl:ENSGALT00000019841 Uniprot:F1NEQ3
Length = 659
Score = 376 (137.4 bits), Expect = 4.7e-34, P = 4.7e-34
Identities = 78/232 (33%), Positives = 136/232 (58%)
Query: 1 MIVPLEQKLDMLWSFIKAHLNSKILVFLTSCKQVKYVFEAFKKLRPGIPLMCLYGRMKQD 60
++ P E++ +L++F+K + K++VF +SC VKY +E + +P++ ++G+ KQ
Sbjct: 392 VVCPSEKRFLLLFTFLKKNRKKKLMVFFSSCMSVKYHYELLNYI--DLPVLAIHGKQKQT 449
Query: 61 RRMAIYAQFCEKRS-VLFCTDVASRGLDFNKAVDWVVQVDCPEDVAS--YIHRVGRTAR- 116
+R + QFC S +L CTDVA+RGLD + VDW+VQ D P+D YIHRVGRTAR
Sbjct: 450 KRTTTFFQFCNAESGILLCTDVAARGLDIPE-VDWIVQYDPPDDPKQKEYIHRVGRTARG 508
Query: 117 YNSGGRSVLFLTPTEMKMLEKLREAKIPIHFTKANTKRLQPVSGLLAALLVKYPDMQHRA 176
N G ++L L P E+ L L++A++P+ + + ++ + L L+ K + A
Sbjct: 509 INGRGHALLILRPEELGFLRYLKQARVPLSEFEFSWSKISDIQSQLEKLIEKNYFLHKSA 568
Query: 177 QKAFITYLRSVHIQKDKEVFDVTKLSIDEFSASLGLPMTPKIRF-LNQKKGK 227
Q+A+ Y+R+ K++++V L +++ S S G + P + +N +G+
Sbjct: 569 QEAYKAYIRAYDSHSLKQIYNVGNLDLNKVSLSFGFKVPPYVDLNVNSNQGR 620
>ZFIN|ZDB-GENE-030131-9685 [details] [associations]
symbol:ddx18 "DEAD (Asp-Glu-Ala-Asp) box
polypeptide 18" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0030099 "myeloid
cell differentiation" evidence=IMP] [GO:0030097 "hemopoiesis"
evidence=IMP] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 ZFIN:ZDB-GENE-030131-9685
GO:GO:0005524 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0030099 InterPro:IPR014014
PROSITE:PS51195 InterPro:IPR025313 Pfam:PF13959 KO:K13179 CTD:8886
HOVERGEN:HBG105702 EMBL:AY648748 IPI:IPI00492099
RefSeq:NP_001003411.1 UniGene:Dr.24235 ProteinModelPortal:Q6DRL1
STRING:Q6DRL1 PRIDE:Q6DRL1 GeneID:321127 KEGG:dre:321127
InParanoid:Q6DRL1 NextBio:20807243 ArrayExpress:Q6DRL1 Bgee:Q6DRL1
Uniprot:Q6DRL1
Length = 653
Score = 375 (137.1 bits), Expect = 5.8e-34, P = 5.8e-34
Identities = 78/229 (34%), Positives = 135/229 (58%)
Query: 1 MIVPLEQKLDMLWSFIKAHLNSKILVFLTSCKQVKYVFEAFKKLRPGIPLMCLYGRMKQD 60
++ P E++ +L++F+K + K++VF +SC VK+ +E + +P+M ++G+ KQ
Sbjct: 387 VVCPSEKRFLLLFTFLKKNRKKKLMVFFSSCMSVKFHYELLNYI--DLPVMAIHGKQKQT 444
Query: 61 RRMAIYAQFCEKRS-VLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTAR-YN 118
+R + QFC S +L CTDVA+RGLD + VDW+VQ D P+D YIHRVGRTAR N
Sbjct: 445 KRTTTFFQFCNADSGILLCTDVAARGLDIPE-VDWIVQFDPPDDPKEYIHRVGRTARGIN 503
Query: 119 SGGRSVLFLTPTEMKMLEKLREAKIPIHFTKANTKRLQPVSGLLAALLVKYPDMQHRAQK 178
G ++L L P E+ L L++AK+P+ + + ++ + L L+ K + AQ+
Sbjct: 504 GRGHALLILRPEELGFLRFLKQAKVPLSEFEFSWTKISDIQSQLDKLIEKNYYLHKSAQE 563
Query: 179 AFITYLRSVHIQKDKEVFDVTKLSIDEFSASLGLPMTPKIRF-LNQKKG 226
A+ +Y+R+ K++++V L + + + S G + P + ++ KG
Sbjct: 564 AYKSYVRAYDSHSLKQIYNVETLDLPKVAMSFGFKVPPFVDLNVHSSKG 612
>FB|FBgn0025140 [details] [associations]
symbol:pit "pitchoune" species:7227 "Drosophila melanogaster"
[GO:0005730 "nucleolus" evidence=NAS;IDA] [GO:0016049 "cell growth"
evidence=IMP] [GO:0008283 "cell proliferation" evidence=IMP]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS;NAS]
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0005634
"nucleus" evidence=NAS] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 EMBL:AE014297
GO:GO:0005524 GO:GO:0005730 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313
Pfam:PF13959 KO:K13179 OMA:KDGYRSY EMBL:U84552 EMBL:AY071402
EMBL:AY119620 RefSeq:NP_524446.3 RefSeq:NP_732694.2
UniGene:Dm.33428 ProteinModelPortal:Q9VD51 SMR:Q9VD51
DIP:DIP-19700N MINT:MINT-1004790 STRING:Q9VD51 PaxDb:Q9VD51
EnsemblMetazoa:FBtr0084174 EnsemblMetazoa:FBtr0084175 GeneID:42595
KEGG:dme:Dmel_CG6375 UCSC:CG6375-RA CTD:42595 FlyBase:FBgn0025140
GeneTree:ENSGT00680000100037 InParanoid:Q9VD51 OrthoDB:EOG4H189W
PhylomeDB:Q9VD51 ChiTaRS:pit GenomeRNAi:42595 NextBio:829597
Bgee:Q9VD51 GermOnline:CG6375 Uniprot:Q9VD51
Length = 680
Score = 375 (137.1 bits), Expect = 6.9e-34, P = 6.9e-34
Identities = 77/220 (35%), Positives = 133/220 (60%)
Query: 1 MIVPLEQKLDMLWSFIKAHLNSKILVFLTSCKQVKYVFEAFKKLRPGIPLMCLYGRMKQD 60
++ P E++L +L++F+K + K++VF +SC VKY E F + +P+ ++G+ KQ
Sbjct: 413 IVCPSEKRLLVLFTFLKKNRKKKVMVFFSSCMSVKYHHELFNYI--DLPVTSIHGKQKQT 470
Query: 61 RRMAIYAQFCEKRS-VLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYN- 118
+R + QFC S +L CTDVA+RGLD + VDW+VQ D P+D YIHRVGRTAR +
Sbjct: 471 KRTTTFFQFCNAESGILLCTDVAARGLDIPQ-VDWIVQYDPPDDPREYIHRVGRTARGSG 529
Query: 119 SGGRSVLFLTPTEMKMLEKLREAKIPIHFTKANTKRLQPVSGLLAALLVKYPDMQHRAQK 178
+ G ++L + P E+ L L+ AK+P++ + + +++ + L L+ K + A++
Sbjct: 530 TSGHALLLMRPEELGFLRYLKAAKVPLNEFEFSWQKIADIQLQLEKLIAKNYFLNQSAKE 589
Query: 179 AFITYLRSVHIQKDKEVFDVTKLSIDEFSASLGLPMTPKI 218
AF +Y+R+ + K++F+V L + + S G + P +
Sbjct: 590 AFKSYVRAYDSHQLKQIFNVNTLDLQAVAKSFGFLVPPVV 629
>TAIR|locus:2086909 [details] [associations]
symbol:AT3G18600 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005829 "cytosol" evidence=RCA]
[GO:0001510 "RNA methylation" evidence=RCA] [GO:0009220 "pyrimidine
ribonucleotide biosynthetic process" evidence=RCA] [GO:0009909
"regulation of flower development" evidence=RCA] [GO:0034968
"histone lysine methylation" evidence=RCA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0005730 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
EMBL:AP001303 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
InterPro:IPR025313 Pfam:PF13959 HOGENOM:HOG000268799 KO:K13179
OMA:KDGYRSY EMBL:AY070052 EMBL:AY096431 IPI:IPI00544206
RefSeq:NP_188490.1 UniGene:At.28418 ProteinModelPortal:Q9LIH9
SMR:Q9LIH9 STRING:Q9LIH9 PaxDb:Q9LIH9 PRIDE:Q9LIH9 DNASU:821391
EnsemblPlants:AT3G18600.1 GeneID:821391 KEGG:ath:AT3G18600
GeneFarm:1030 TAIR:At3g18600 InParanoid:Q9LIH9 PhylomeDB:Q9LIH9
ProtClustDB:CLSN2914752 Genevestigator:Q9LIH9 GermOnline:AT3G18600
Uniprot:Q9LIH9
Length = 568
Score = 366 (133.9 bits), Expect = 2.6e-33, P = 2.6e-33
Identities = 82/227 (36%), Positives = 132/227 (58%)
Query: 2 IVPLEQKLDMLWSFIKAHLNSKILVFLTSCKQVKYVFEAFKKLRPGIPLMCLYGRMKQDR 61
+VP +Q+L +L SF+K +LN KI+VF ++CK V++ E K + + ++G M Q+R
Sbjct: 315 VVPSKQRLILLISFLKKNLNKKIMVFFSTCKSVQFHTEIMKI--SDVDVSDIHGGMDQNR 372
Query: 62 RMAIYAQFCE-KRSVLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYNSG 120
R + F + K+ +L CTDVA+RGLD +VDW++Q D P+ YIHRVGRTAR
Sbjct: 373 RTKTFFDFMKAKKGILLCTDVAARGLDI-PSVDWIIQYDPPDKPTEYIHRVGRTARGEGA 431
Query: 121 -GRSVLFLTPTEMKMLEKLREAKIPIHFTKANTKRLQPVSGLLAALLVKYPDMQHRAQKA 179
G+++L L P E++ + L+ AK+P+ + N KRL V L + K ++ A+ A
Sbjct: 432 KGKALLVLIPEELQFIRYLKAAKVPVKELEFNEKRLSNVQSALEKCVAKDYNLNKLAKDA 491
Query: 180 FITYLRSVHIQKDKEVFDVTKLSIDEFSASLGLPMTPKIRFLNQKKG 226
+ YL + + K++F+V +L + + S PK+ LN + G
Sbjct: 492 YRAYLSAYNSHSLKDIFNVHRLDLLAVAESFCFSSPPKVN-LNIESG 537
>DICTYBASE|DDB_G0282741 [details] [associations]
symbol:ddx18 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 dictyBase:DDB_G0282741 GO:GO:0005524
GO:GO:0005730 EMBL:AAFI02000047 GenomeReviews:CM000152_GR
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HSSP:Q58083 InterPro:IPR025313 Pfam:PF13959
RefSeq:XP_640236.1 ProteinModelPortal:Q54S03 STRING:Q54S03
EnsemblProtists:DDB0234194 GeneID:8623775 KEGG:ddi:DDB_G0282741
KO:K13179 OMA:KDGYRSY Uniprot:Q54S03
Length = 602
Score = 365 (133.5 bits), Expect = 5.0e-33, P = 5.0e-33
Identities = 80/229 (34%), Positives = 133/229 (58%)
Query: 1 MIVPLEQKLDMLWSFIKAHLNSKILVFLTSCKQVKYVFEAFKKLRPGIPLMCLYGRMKQD 60
++ P E++ +L++F+K +L+ KI+VFL+SC VKY E + IP++ L+GR KQ
Sbjct: 345 VVCPSERRFLLLYTFLKKNLSKKIIVFLSSCNAVKYTAELLNYI--DIPVLELHGRQKQQ 402
Query: 61 RRMAIYAQFCE-KRSVLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTAR-YN 118
+R + +F ++ +L CTDVA+RGLD +VDW++Q D P+D YIHRVGRTAR
Sbjct: 403 KRTNTFYEFVNAEKGILICTDVAARGLDI-PSVDWIIQYDPPDDPKEYIHRVGRTARGVG 461
Query: 119 SGGRSVLFLTPTEMKMLEKLREAKIPIHFTKANTKRLQPVSGLLAALLVKYPDMQHRAQK 178
GR++LFL P E+ L+ L+ AK+P++ + ++ V L ++ + + + A+
Sbjct: 462 KKGRALLFLLPKELGFLKYLKLAKVPLNEYEFPKSKIANVQDQLEKVVSQNFYLYNSARD 521
Query: 179 AFITYLRSVHIQKDKEVFDVTKLSIDEFSASLGLPMTPKIRFLNQKKGK 227
A+ Y+ + K++FDV L + + + G PK+ GK
Sbjct: 522 AYKAYICAYASHSLKDIFDVNALDLQCVAKAFGFLDPPKVNLNVNSSGK 570
>TAIR|locus:2152099 [details] [associations]
symbol:AT5G65900 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:CP002688 GenomeReviews:BA000015_GR
EMBL:AL021684 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 InterPro:IPR025313 Pfam:PF13959
HOGENOM:HOG000268799 KO:K13179 EMBL:AB018108 EMBL:AY059930
EMBL:BT001188 EMBL:AJ012745 IPI:IPI00526354 PIR:T05883 PIR:T51352
RefSeq:NP_201391.1 UniGene:At.19658 UniGene:At.66704
ProteinModelPortal:Q9SB89 SMR:Q9SB89 PaxDb:Q9SB89 PRIDE:Q9SB89
EnsemblPlants:AT5G65900.1 GeneID:836719 KEGG:ath:AT5G65900
GeneFarm:951 TAIR:At5g65900 InParanoid:Q9SB89 OMA:HLENTNG
PhylomeDB:Q9SB89 ProtClustDB:CLSN2916378 Genevestigator:Q9SB89
GermOnline:AT5G65900 Uniprot:Q9SB89
Length = 633
Score = 345 (126.5 bits), Expect = 1.0e-30, P = 1.0e-30
Identities = 80/236 (33%), Positives = 133/236 (56%)
Query: 2 IVPLEQKLDMLWSFIKAHLNSK-ILVFLTSCKQVKYVFEAFKKLRPGIPLMCLYGRMKQD 60
+VP +L L +F+K K I+VF ++CK K+ E F+ ++ + + G + Q+
Sbjct: 380 VVPSAMRLLFLLTFLKRFQGKKKIMVFFSTCKSTKFHAELFRYIK--FDCLEIRGGIDQN 437
Query: 61 RRMAIYAQFCEKRS-VLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYNS 119
+R + QF + + +L CT+VA+RGLDF VDW+VQ D P++ YIHRVGRTAR
Sbjct: 438 KRTPTFLQFIKAETGILLCTNVAARGLDFPH-VDWIVQYDPPDNPTDYIHRVGRTARGEG 496
Query: 120 G-GRSVLFLTPTEMKMLEKLREAKIPIHFTKANTKRLQPVSGLLAALLVKYPDMQHRAQK 178
G+++L LTP E+K ++ L+ AKIP+ + K+L V + L+ + ++ A++
Sbjct: 497 AKGKALLVLTPQELKFIQYLKAAKIPVEEHEFEEKKLLDVKPFVENLISENYALKESAKE 556
Query: 179 AFITYLRSVHIQKDKEVFDVTKLSIDEFSASLGLPMTPKIRFLNQKKGKMVPVKPV 234
A+ TY+ K+VF+V +L++ E + S G PK+ + G +PV
Sbjct: 557 AYKTYISGYDSHSMKDVFNVHQLNLTEVATSFGFSDPPKVALKIDRGGYRSKREPV 612
>GENEDB_PFALCIPARUM|PFF1500c [details] [associations]
symbol:PFF1500c "DEAD/DEAH box ATP-dependent RNA
helicase, putative" species:5833 "Plasmodium falciparum"
[GO:0016070 "RNA metabolic process" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003723 GO:GO:0016070
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
EMBL:AL844505 InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313
Pfam:PF13959 HOGENOM:HOG000268799 KO:K13179 OMA:KDGYRSY
RefSeq:XP_966291.1 ProteinModelPortal:C6KTE4
EnsemblProtists:PFF1500c:mRNA GeneID:3885813 KEGG:pfa:PFF1500c
EuPathDB:PlasmoDB:PF3D7_0630900 ProtClustDB:CLSZ2514457
Uniprot:C6KTE4
Length = 601
Score = 330 (121.2 bits), Expect = 3.6e-29, P = 3.6e-29
Identities = 76/231 (32%), Positives = 133/231 (57%)
Query: 2 IVPLEQKLDMLWSFIKAHLNSKILVFLTSCKQVKYVFEAFKKLRPGIPLMCLYGRMKQDR 61
+V +++ +L++F+K +++ KI+VF +C V++ + + IP C++G+ KQ++
Sbjct: 372 LVDEDKRFLLLFTFLKKNMSKKIMVFFNNCMSVQFYNDLLNYI--DIPTYCIHGKKKQNK 429
Query: 62 RMAIYAQF-CEKRSVLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTAR-YNS 119
R+ + F K ++L CT+VA+RGLD V++++Q D P+D YIHRVGRT R +S
Sbjct: 430 RLKSFHDFSAAKCAILLCTNVAARGLDIPN-VNYIIQYDPPDDSKEYIHRVGRTCRGQDS 488
Query: 120 GGRSVLFLTPTEMKMLEKLREAKIPIHFTKANTKRLQPVSGLLAALLVKYPDMQHRAQKA 179
G +++FL E+K L L+ IPI+ + +L + + +++ K + A++A
Sbjct: 489 NGSAIIFLMKHELKFLNYLKFYNIPINQFAYDPNKLINIQSHIQSIVTKNFHLHKMAREA 548
Query: 180 FITYLRSVHIQKDKEVFDVTKLSIDEFSASLGLPMTPKIRF---LNQKKGK 227
F +YL K+VFDV L++ S + GL + PK+ LN KK K
Sbjct: 549 FKSYLNGYITYALKDVFDVNNLNLLLTSKNFGLEVPPKVDLNLKLNVKKKK 599
>UNIPROTKB|C6KTE4 [details] [associations]
symbol:PFF1500c "DEAD/DEAH box ATP-dependent RNA helicase,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003723 GO:GO:0016070 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 EMBL:AL844505 InterPro:IPR014014
PROSITE:PS51195 InterPro:IPR025313 Pfam:PF13959
HOGENOM:HOG000268799 KO:K13179 OMA:KDGYRSY RefSeq:XP_966291.1
ProteinModelPortal:C6KTE4 EnsemblProtists:PFF1500c:mRNA
GeneID:3885813 KEGG:pfa:PFF1500c EuPathDB:PlasmoDB:PF3D7_0630900
ProtClustDB:CLSZ2514457 Uniprot:C6KTE4
Length = 601
Score = 330 (121.2 bits), Expect = 3.6e-29, P = 3.6e-29
Identities = 76/231 (32%), Positives = 133/231 (57%)
Query: 2 IVPLEQKLDMLWSFIKAHLNSKILVFLTSCKQVKYVFEAFKKLRPGIPLMCLYGRMKQDR 61
+V +++ +L++F+K +++ KI+VF +C V++ + + IP C++G+ KQ++
Sbjct: 372 LVDEDKRFLLLFTFLKKNMSKKIMVFFNNCMSVQFYNDLLNYI--DIPTYCIHGKKKQNK 429
Query: 62 RMAIYAQF-CEKRSVLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTAR-YNS 119
R+ + F K ++L CT+VA+RGLD V++++Q D P+D YIHRVGRT R +S
Sbjct: 430 RLKSFHDFSAAKCAILLCTNVAARGLDIPN-VNYIIQYDPPDDSKEYIHRVGRTCRGQDS 488
Query: 120 GGRSVLFLTPTEMKMLEKLREAKIPIHFTKANTKRLQPVSGLLAALLVKYPDMQHRAQKA 179
G +++FL E+K L L+ IPI+ + +L + + +++ K + A++A
Sbjct: 489 NGSAIIFLMKHELKFLNYLKFYNIPINQFAYDPNKLINIQSHIQSIVTKNFHLHKMAREA 548
Query: 180 FITYLRSVHIQKDKEVFDVTKLSIDEFSASLGLPMTPKIRF---LNQKKGK 227
F +YL K+VFDV L++ S + GL + PK+ LN KK K
Sbjct: 549 FKSYLNGYITYALKDVFDVNNLNLLLTSKNFGLEVPPKVDLNLKLNVKKKK 599
>UNIPROTKB|Q8NHQ9 [details] [associations]
symbol:DDX55 "ATP-dependent RNA helicase DDX55"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
InterPro:IPR025313 Pfam:PF13959 HSSP:P26196 CTD:57696
HOGENOM:HOG000268803 HOVERGEN:HBG107796 KO:K14809 OrthoDB:EOG4WH8KN
OMA:CACVEYW EMBL:AC055713 EMBL:AC117503 EMBL:BC030020 EMBL:AL833756
EMBL:AB046815 IPI:IPI00185361 RefSeq:NP_065987.1 UniGene:Hs.286173
ProteinModelPortal:Q8NHQ9 SMR:Q8NHQ9 STRING:Q8NHQ9
PhosphoSite:Q8NHQ9 DMDM:296439376 PaxDb:Q8NHQ9 PRIDE:Q8NHQ9
Ensembl:ENST00000238146 GeneID:57696 KEGG:hsa:57696 UCSC:uc001ufi.3
GeneCards:GC12P124086 HGNC:HGNC:20085 neXtProt:NX_Q8NHQ9
PharmGKB:PA134984021 InParanoid:Q8NHQ9 ChiTaRS:DDX55
GenomeRNAi:57696 NextBio:64547 ArrayExpress:Q8NHQ9 Bgee:Q8NHQ9
CleanEx:HS_DDX55 Genevestigator:Q8NHQ9 GermOnline:ENSG00000111364
Uniprot:Q8NHQ9
Length = 600
Score = 326 (119.8 bits), Expect = 1.0e-28, P = 1.0e-28
Identities = 92/308 (29%), Positives = 156/308 (50%)
Query: 1 MIVPLEQKLDMLWSFIKAHLNSKILVFLTSCKQVKYVFEAFKKLRPGIPLMCLYGRMKQD 60
M+ ++K + L F++ H K LVF ++C V+Y +A + L G+ +MC++G+MK
Sbjct: 247 MVCKADEKFNQLVHFLRNHKQEKHLVFFSTCACVEYYGKALEVLVKGVKIMCIHGKMKY- 305
Query: 61 RRMAIYAQFCEKRS-VLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYNS 119
+R I+ +F + +S +L CTDV +RG+D + V+WV+Q D P + ++++HR GRTAR
Sbjct: 306 KRNKIFMEFRKLQSGILVCTDVMARGIDIPE-VNWVLQYDPPSNASAFVHRCGRTARIGH 364
Query: 120 GGRSVLFLTPTEMKMLEKLR-EAKIPIHFTKA--NTKRLQPVSGLLAALLVKYPDMQHRA 176
GG +++FL P E + L K P+ K NT L P L ++ + + +
Sbjct: 365 GGSALVFLLPMEESYINFLAINQKCPLQEMKPQRNTADLLPK---LKSMALADRAVFEKG 421
Query: 177 QKAFITYLRSVHIQKDKEVFDVTKLSIDEFSASLGLPMTPKIRFLNQKK-GKMVPVKPVL 235
KAF++Y+++ + +F + L + L PK+ L K+ VPV
Sbjct: 422 MKAFVSYVQAYAKHECNLIFRLKDLDFASLARGFALLRMPKMPELRGKQFPDFVPVDVNT 481
Query: 236 DNAEKEDKLMIS-REKLLPDNFTEENVDRDILETKDIEDEGKADLLED-VMRATRVKKNK 293
D +DK+ R+KLL E+ E+EG+ +++ + KK K
Sbjct: 482 DTIPFKDKIREKQRQKLLEQQRREKT-----------ENEGRRKFIKNKAWSKQKAKKEK 530
Query: 294 KLKINVHR 301
K K+N R
Sbjct: 531 KKKMNEKR 538
>UNIPROTKB|F1MW45 [details] [associations]
symbol:DDX55 "ATP-dependent RNA helicase DDX55"
species:9913 "Bos taurus" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313
Pfam:PF13959 IPI:IPI00726158 UniGene:Bt.74315
GeneTree:ENSGT00550000074969 OMA:CACVEYW EMBL:DAAA02045235
Ensembl:ENSBTAT00000009556 Uniprot:F1MW45
Length = 601
Score = 323 (118.8 bits), Expect = 2.1e-28, P = 2.1e-28
Identities = 90/307 (29%), Positives = 154/307 (50%)
Query: 1 MIVPLEQKLDMLWSFIKAHLNSKILVFLTSCKQVKYVFEAFKKLRPGIPLMCLYGRMKQD 60
M+ ++K + L F++ H K LVF ++C V+Y +A + L G+ +MC++G+MK
Sbjct: 247 MVCKADEKFNQLVHFLRNHKQEKHLVFFSTCACVEYYGKALETLVKGVKIMCIHGKMKY- 305
Query: 61 RRMAIYAQFCEKRS-VLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYNS 119
+R I+ +F + +S +L CTDV +RG+D + V+WV+Q D P + ++++HR GRTAR
Sbjct: 306 KRNKIFMEFRKLQSGILVCTDVMARGIDIPE-VNWVLQYDPPSNASAFVHRCGRTARIGH 364
Query: 120 GGRSVLFLTPTEMKMLEKLR-EAKIPIHFTKA--NTKRLQPVSGLLAALLVKYPDMQHRA 176
GG +++FL P E + L K P+ K NT L P L A+ + + +
Sbjct: 365 GGSALVFLLPMEESYISFLAINQKCPLQEMKLQKNTADLLPK---LKAMALGDRAVFEKG 421
Query: 177 QKAFITYLRSVHIQKDKEVFDVTKLSIDEFSASLGLPMTPKIRFLNQKK-GKMVPVKPVL 235
KAF++Y+++ + +F + L + L PK+ L K+ VPV
Sbjct: 422 MKAFVSYVQAYAKHECNLIFRLKDLDFASLARGFALLRMPKMPELRGKQFPDFVPVDVNT 481
Query: 236 DNAEKEDKLMISREKLLPDNFTEENVDRDILETKDIEDEGKADLLED-VMRATRVKKNKK 294
D +DK+ REK E+ + E++G+ +++ + KK KK
Sbjct: 482 DTIPFKDKI---REKQRQKQLLEQQ------RKEKTENDGRRKFIKNKAWSKQKAKKEKK 532
Query: 295 LKINVHR 301
K+ R
Sbjct: 533 KKLTEKR 539
>UNIPROTKB|Q2NL08 [details] [associations]
symbol:DDX55 "ATP-dependent RNA helicase DDX55"
species:9913 "Bos taurus" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
InterPro:IPR025313 Pfam:PF13959 EMBL:BC111255 IPI:IPI00726158
RefSeq:NP_001039472.1 UniGene:Bt.74315 PRIDE:Q2NL08 GeneID:508581
KEGG:bta:508581 CTD:57696 HOGENOM:HOG000268803 HOVERGEN:HBG107796
InParanoid:Q2NL08 KO:K14809 OrthoDB:EOG4WH8KN NextBio:20868584
Uniprot:Q2NL08
Length = 601
Score = 323 (118.8 bits), Expect = 2.1e-28, P = 2.1e-28
Identities = 90/307 (29%), Positives = 154/307 (50%)
Query: 1 MIVPLEQKLDMLWSFIKAHLNSKILVFLTSCKQVKYVFEAFKKLRPGIPLMCLYGRMKQD 60
M+ ++K + L F++ H K LVF ++C V+Y +A + L G+ +MC++G+MK
Sbjct: 247 MVCKADEKFNQLVHFLRNHKQEKHLVFFSTCACVEYYGKALETLVKGVKIMCIHGKMKY- 305
Query: 61 RRMAIYAQFCEKRS-VLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYNS 119
+R I+ +F + +S +L CTDV +RG+D + V+WV+Q D P + ++++HR GRTAR
Sbjct: 306 KRNKIFMEFRKLQSGILVCTDVMARGIDIPE-VNWVLQYDPPSNASAFVHRCGRTARIGH 364
Query: 120 GGRSVLFLTPTEMKMLEKLR-EAKIPIHFTKA--NTKRLQPVSGLLAALLVKYPDMQHRA 176
GG +++FL P E + L K P+ K NT L P L A+ + + +
Sbjct: 365 GGSALVFLLPMEESYISFLAINQKCPLQEMKLQKNTADLLPK---LKAMALGDRAVFEKG 421
Query: 177 QKAFITYLRSVHIQKDKEVFDVTKLSIDEFSASLGLPMTPKIRFLNQKK-GKMVPVKPVL 235
KAF++Y+++ + +F + L + L PK+ L K+ VPV
Sbjct: 422 MKAFVSYVQAYAKHECNLIFRLKDLDFASLARGFALLRMPKMPELRGKQFPDFVPVDVNT 481
Query: 236 DNAEKEDKLMISREKLLPDNFTEENVDRDILETKDIEDEGKADLLED-VMRATRVKKNKK 294
D +DK+ REK E+ + E++G+ +++ + KK KK
Sbjct: 482 DTIPFKDKI---REKQRQKQLLEQQ------RKEKTENDGRRKFIKNKAWSKQKAKKEKK 532
Query: 295 LKINVHR 301
K+ R
Sbjct: 533 KKLTEKR 539
>UNIPROTKB|F1RFL5 [details] [associations]
symbol:DDX55 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313 Pfam:PF13959
CTD:57696 KO:K14809 GeneTree:ENSGT00550000074969 OMA:CACVEYW
EMBL:CU468658 RefSeq:XP_001927747.2 UniGene:Ssc.4554
UniGene:Ssc.95961 Ensembl:ENSSSCT00000010713 GeneID:100157342
KEGG:ssc:100157342 Uniprot:F1RFL5
Length = 600
Score = 319 (117.4 bits), Expect = 5.8e-28, P = 5.8e-28
Identities = 91/308 (29%), Positives = 154/308 (50%)
Query: 1 MIVPLEQKLDMLWSFIKAHLNSKILVFLTSCKQVKYVFEAFKKLRPGIPLMCLYGRMKQD 60
M+ ++K + L F++ H K LVF ++C V+Y +A + L + +MC++G+MK
Sbjct: 247 MVCKADEKFNQLVHFLRNHKQEKHLVFFSTCACVEYYGKALEALVRSVKIMCIHGKMKY- 305
Query: 61 RRMAIYAQFCEKRS-VLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYNS 119
+R I+ +F + +S +L CTDV +RG+D + V+WV+Q D P ++++HR GRTAR
Sbjct: 306 KRNKIFMEFRQLQSGILVCTDVMARGIDIPE-VNWVLQYDPPSSASAFVHRCGRTARIGH 364
Query: 120 GGRSVLFLTPTEMKMLEKLR-EAKIPIHFTKA--NTKRLQPVSGLLAALLVKYPDMQHRA 176
GG +++FL P E + L K P+ K NT L P L ++ + + +
Sbjct: 365 GGSALVFLLPMEESYVNFLAINQKCPLQAMKLQKNTVDLLPK---LKSMALADRAVFEKG 421
Query: 177 QKAFITYLRSVHIQKDKEVFDVTKLSIDEFSASLGLPMTPKIRFLNQKK-GKMVPVKPVL 235
KAF++Y+++ + +F + L + L PK+ L K+ VPV
Sbjct: 422 MKAFVSYVQAYAKHECNLIFRLKDLDFASIARGFALLRMPKMPELRGKQFPDFVPVDVNT 481
Query: 236 DNAEKEDKLMIS-REKLLPDNFTEENVDRDILETKDIEDEGKADLLED-VMRATRVKKNK 293
D +DK+ R+KLL E+ E+EG+ +++ + KK K
Sbjct: 482 DTIPFKDKIREKQRQKLLEQQRKEKT-----------ENEGRRKFIKNKAWSKQKAKKEK 530
Query: 294 KLKINVHR 301
K K+N R
Sbjct: 531 KKKMNEKR 538
>UNIPROTKB|F1P8J6 [details] [associations]
symbol:DDX55 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313
Pfam:PF13959 CTD:57696 KO:K14809 GeneTree:ENSGT00550000074969
EMBL:AAEX03014637 RefSeq:XP_543371.2 Ensembl:ENSCAFT00000011945
GeneID:486246 KEGG:cfa:486246 Uniprot:F1P8J6
Length = 599
Score = 316 (116.3 bits), Expect = 1.2e-27, P = 1.2e-27
Identities = 87/306 (28%), Positives = 156/306 (50%)
Query: 1 MIVPLEQKLDMLWSFIKAHLNSKILVFLTSCKQVKYVFEAFKKLRPGIPLMCLYGRMKQD 60
M+ ++K + L F++ H K L+F ++C V+Y +A + L + +MC++G+MK
Sbjct: 247 MVCKADEKFNQLVHFLRNHKQEKHLIFFSTCACVEYYGKALEALVKSVKIMCIHGKMKH- 305
Query: 61 RRMAIYAQFCEKRS-VLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYNS 119
+R I+ +F + +S +L CTDV +RG+D + V+WV+Q D P ++++HR GRTAR
Sbjct: 306 KRNKIFMEFRKLQSGILVCTDVMARGIDIPE-VNWVLQYDPPSSASAFVHRCGRTARIGH 364
Query: 120 GGRSVLFLTPTEMKMLEKLR-EAKIPIHFTKA--NTKRLQPVSGLLAALLVKYPDMQHRA 176
GG +++FL P E + L K P+ K NT L P L ++ + + +
Sbjct: 365 GGSALVFLLPMEESYVTFLEINQKCPLQEMKLQKNTGDLLPK---LKSMALADRAVFEKG 421
Query: 177 QKAFITYLRSVHIQKDKEVFDVTKLSIDEFSASLGLPMTPKIRFLNQKK-GKMVPVKPVL 235
KAF++Y+++ + +F + L + L PK+ L ++ VP
Sbjct: 422 MKAFVSYVQAYAKHECNLIFRLKDLDFASLARGFALLRMPKMPELRGRQFPDFVPADVDT 481
Query: 236 DNAEKEDKLMISREKLLPDNFTEENVDRDILETKDIEDEGKADLLEDVMRATRVKKNKKL 295
+N +DK+ REK ++ ++R E + E+EG+ ++ + KK KK
Sbjct: 482 NNIPFKDKI---REKQ-----RQKLLERQRKEKR--ENEGRKNIKNKAWSKQKAKKEKKK 531
Query: 296 KINVHR 301
++N R
Sbjct: 532 RMNEKR 537
>UNIPROTKB|F6XWM4 [details] [associations]
symbol:DDX55 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313
Pfam:PF13959 GeneTree:ENSGT00550000074969
Ensembl:ENSCAFT00000035837 EMBL:AAEX03014637 OMA:DADNVFA
Uniprot:F6XWM4
Length = 734
Score = 316 (116.3 bits), Expect = 2.2e-27, P = 2.2e-27
Identities = 87/306 (28%), Positives = 156/306 (50%)
Query: 1 MIVPLEQKLDMLWSFIKAHLNSKILVFLTSCKQVKYVFEAFKKLRPGIPLMCLYGRMKQD 60
M+ ++K + L F++ H K L+F ++C V+Y +A + L + +MC++G+MK
Sbjct: 382 MVCKADEKFNQLVHFLRNHKQEKHLIFFSTCACVEYYGKALEALVKSVKIMCIHGKMKH- 440
Query: 61 RRMAIYAQFCEKRS-VLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYNS 119
+R I+ +F + +S +L CTDV +RG+D + V+WV+Q D P ++++HR GRTAR
Sbjct: 441 KRNKIFMEFRKLQSGILVCTDVMARGIDIPE-VNWVLQYDPPSSASAFVHRCGRTARIGH 499
Query: 120 GGRSVLFLTPTEMKMLEKLR-EAKIPIHFTKA--NTKRLQPVSGLLAALLVKYPDMQHRA 176
GG +++FL P E + L K P+ K NT L P L ++ + + +
Sbjct: 500 GGSALVFLLPMEESYVTFLEINQKCPLQEMKLQKNTGDLLPK---LKSMALADRAVFEKG 556
Query: 177 QKAFITYLRSVHIQKDKEVFDVTKLSIDEFSASLGLPMTPKIRFLNQKK-GKMVPVKPVL 235
KAF++Y+++ + +F + L + L PK+ L ++ VP
Sbjct: 557 MKAFVSYVQAYAKHECNLIFRLKDLDFASLARGFALLRMPKMPELRGRQFPDFVPADVDT 616
Query: 236 DNAEKEDKLMISREKLLPDNFTEENVDRDILETKDIEDEGKADLLEDVMRATRVKKNKKL 295
+N +DK+ REK ++ ++R E + E+EG+ ++ + KK KK
Sbjct: 617 NNIPFKDKI---REKQ-----RQKLLERQRKEKR--ENEGRKNIKNKAWSKQKAKKEKKK 666
Query: 296 KINVHR 301
++N R
Sbjct: 667 RMNEKR 672
>DICTYBASE|DDB_G0291588 [details] [associations]
symbol:ddx55 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0042254 "ribosome biogenesis" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 dictyBase:DDB_G0291588 GO:GO:0005524
EMBL:AAFI02000177 GenomeReviews:CM000155_GR GO:GO:0005730
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 InterPro:IPR025313 Pfam:PF13959 KO:K14809
OMA:HEKKVET RefSeq:XP_635318.1 ProteinModelPortal:Q54EC2
STRING:Q54EC2 EnsemblProtists:DDB0234215 GeneID:8628262
KEGG:ddi:DDB_G0291588 ProtClustDB:CLSZ2429585 Uniprot:Q54EC2
Length = 663
Score = 296 (109.3 bits), Expect = 7.1e-27, Sum P(2) = 7.1e-27
Identities = 83/290 (28%), Positives = 147/290 (50%)
Query: 1 MIVPLEQKLDMLWSFIKAHLN-SKILVFLTSCKQVKYVFEAFK--KLRPGIPLMCLYGRM 57
MIVP+E++L+ L F+ H++ +KI+++ +C V Y F+ + K+ G P L+G+
Sbjct: 290 MIVPVEERLNQLVHFLLNHIDKNKIIIYFLTCSTVDYFFKILQSVKVLSGKPFFSLHGKA 349
Query: 58 KQDRRMAIYAQFCEKRS-VLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTAR 116
+R+ ++ F + + L TD+A+RGLD VDWV+Q D P+D +++HR+GRTAR
Sbjct: 350 PHSQRIKVFDSFSQATNGCLLSTDLAARGLDIPN-VDWVLQYDSPQDPKAFVHRIGRTAR 408
Query: 117 YNSGGRSVLFLTPTEMKMLEKLREAKIP-IHFTKA-NTKRLQPVSGLLAALLVKYPDMQH 174
G +++FL+P E +E L+ K+P + KA N + P + + ++
Sbjct: 409 MGRDGNALIFLSPEEDSYIEFLKIKKVPLVEMVKAENVTNVLPE---IKKISFNDREIME 465
Query: 175 RAQKAFITYLRSVHIQKDKEVFDVTKLSIDEFSASLGL---PMTPKIR--FLNQKKGKMV 229
+ A ++++R +F +L+I + GL P P+IR L +
Sbjct: 466 KGVIAMVSHVRGYKEHLCPYIFVFHRLNIGLLATGFGLLYLPRMPEIRDKTLIAEWTSGY 525
Query: 230 PVKPVLDNAEKEDKLMISREKLLPDNFTEENVDRDILETKDIEDEGKADL 279
+L A KE K +++L N + ++D E +D +E K L
Sbjct: 526 TKDQILKIAYKEKKK--EKQRLEKVNKIKLKKEKDAKERQDAINEKKRKL 573
Score = 38 (18.4 bits), Expect = 7.1e-27, Sum P(2) = 7.1e-27
Identities = 5/17 (29%), Positives = 12/17 (70%)
Query: 412 DSDSDNDNDERKQNKDD 428
D++ +N+ DE + ++D
Sbjct: 644 DTEQNNNEDEEDEEEED 660
>TAIR|locus:2825324 [details] [associations]
symbol:AT1G71370 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005524
GO:GO:0003723 EMBL:AC016163 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 InterPro:IPR025313 Pfam:PF13959
HOGENOM:HOG000268803 KO:K14809 EMBL:AK118294 IPI:IPI00527105
RefSeq:NP_177293.1 UniGene:At.70349 ProteinModelPortal:Q8GXD6
SMR:Q8GXD6 PRIDE:Q8GXD6 EnsemblPlants:AT1G71370.1 GeneID:843478
KEGG:ath:AT1G71370 GeneFarm:1028 TAIR:At1g71370 InParanoid:Q8GXD6
OMA:EYLKCEA PhylomeDB:Q8GXD6 ProtClustDB:CLSN2914591
Genevestigator:Q8GXD6 GermOnline:AT1G71370 Uniprot:Q8GXD6
Length = 558
Score = 293 (108.2 bits), Expect = 3.8e-26, Sum P(2) = 3.8e-26
Identities = 86/291 (29%), Positives = 140/291 (48%)
Query: 6 EQKLDMLWSFIKAHLNSKILVFLTSCKQVKY---VFEAFKKLRPGIPLMCLYGRMKQDRR 62
+QK L + + N K++VF +C V Y V L+ I +G+M Q R
Sbjct: 250 DQKSSQLVHLLIENKNKKLVVFFMTCACVDYWGLVLSKIPTLK-SISFFSTHGKMDQKGR 308
Query: 63 MAIYAQFCEKRS-VLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYNSGG 121
A F E S VL CTDVA+RGLD +D+VVQ D P+D +IHRVGRTAR G
Sbjct: 309 DTALASFTEASSGVLLCTDVAARGLDI-PGIDYVVQYDPPQDPDVFIHRVGRTARMERQG 367
Query: 122 RSVLFLTPTEMKMLEKLREAKIPIHFTKANTKRLQPVSGLLAALLVKYPDMQHRAQKAFI 181
R+++FL P E +E +R ++P+ K + + V ++ +L +K + + +AF+
Sbjct: 368 RAIVFLMPKETDYVEFMRIRRVPLQERKCS-ENASDVIPIIRSLAIKDRAVLEKGLQAFV 426
Query: 182 TYLRSVHIQKDKEVFDVTKLSIDEFSASLGLPMTPKIRFLNQKKGKMVPVKPVLDNAEKE 241
+++R+ +F L I + + G+ P I + Q + +V PV ++
Sbjct: 427 SFVRAYKEHHCSYIFSWKGLEIGKLAMGYGILSFPYISEVKQDRIGIVGFTPVQGITFED 486
Query: 242 DKLMI-SREKLLPDNFTEENVDRDILETKDIEDEGKADLLEDVMRATRVKK 291
K SREK N D+ E + + + ++D +A+R +K
Sbjct: 487 IKYKNKSREKQRQQNLLARK-DKLQQEKRGKRKKSSKEAVDDSNKASRKRK 536
Score = 39 (18.8 bits), Expect = 3.8e-26, Sum P(2) = 3.8e-26
Identities = 9/24 (37%), Positives = 15/24 (62%)
Query: 400 ERGRRKKAKIYFDSDSDNDNDERK 423
+RG+RKK+ DS+ + +RK
Sbjct: 513 KRGKRKKSSKEAVDDSNKASRKRK 536
>UNIPROTKB|F1NJA0 [details] [associations]
symbol:DDX55 "ATP-dependent RNA helicase DDX55"
species:9031 "Gallus gallus" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313
Pfam:PF13959 GeneTree:ENSGT00550000074969 IPI:IPI00590534
OMA:CACVEYW EMBL:AADN02034882 Ensembl:ENSGALT00000005224
Uniprot:F1NJA0
Length = 591
Score = 302 (111.4 bits), Expect = 4.0e-26, P = 4.0e-26
Identities = 94/357 (26%), Positives = 168/357 (47%)
Query: 1 MIVPLEQKLDMLWSFIKAHLNSKILVFLTSCKQVKYVFEAFKKLRPGIPLMCLYGRMKQD 60
MI ++K + L F++ H K LVF ++C V+Y +A + L + +MC++G+MK
Sbjct: 247 MICKADEKFNQLVHFLRQHKQEKHLVFFSTCACVEYYGKALESLIKQVKIMCIHGKMKH- 305
Query: 61 RRMAIYAQFCEKRS-VLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYNS 119
+R I+ +F +L CTDV +RG+D + V WV+Q D P ++++HR GRTAR +
Sbjct: 306 KRNKIFTEFRRLAGGILVCTDVMARGIDIPE-VHWVLQYDPPSSASAFVHRCGRTARIGN 364
Query: 120 GGRSVLFLTPTEMKMLEKLR-EAKIPIHFTKANTKRLQPVSGLLAALLVKYPDMQHRAQK 178
G +++FL P E + L K P+ + L + L + L + + K
Sbjct: 365 AGSALVFLLPMEESYINFLSINQKCPMQEMQPQRNVLDLLPKLKSMALADRAVFE-KGMK 423
Query: 179 AFITYLRSVHIQKDKEVFDVTKLSIDEFSASLGLPMTPKIRFLNQKKGKMVP-VKPVLDN 237
AF++Y+++ + +F + L + L PK+ L +GK P PV N
Sbjct: 424 AFVSYIQAYAKHECNLIFRIKDLDFASLAKGFALLKMPKMPEL---RGKCFPDFTPVTVN 480
Query: 238 AEK---EDKLMISREKLLPDNFTEENVDRDILETKDIEDEGKADLLEDVMRAT-RVKKNK 293
+ +DK +REK ++ +R+ E EGK +++ + + K+ K
Sbjct: 481 TDSIPFKDK---NREKQRQKQLEQQRKERE-------ESEGKKKFIKNKSWSKQKAKREK 530
Query: 294 KLKINVHRPL--GTRLVFDEECNTVPPLAMLADTKNANVSLDQDQK--TEYYKKIRE 346
K K+ R G+ + ++ + +L K +S ++ +K T K +E
Sbjct: 531 KRKLTAKRKREEGSDMEDEDMEELLNDTRLLKRLKKGKISEEEFEKRLTGSQSKFKE 587
>UNIPROTKB|Q5ZLN8 [details] [associations]
symbol:DDX55 "ATP-dependent RNA helicase DDX55"
species:9031 "Gallus gallus" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
InterPro:IPR025313 Pfam:PF13959 HSSP:P26196 CTD:57696
HOGENOM:HOG000268803 HOVERGEN:HBG107796 KO:K14809 OrthoDB:EOG4WH8KN
EMBL:AJ719696 IPI:IPI00590534 RefSeq:NP_001006185.1
UniGene:Gga.42731 ProteinModelPortal:Q5ZLN8 STRING:Q5ZLN8
PRIDE:Q5ZLN8 GeneID:416820 KEGG:gga:416820 InParanoid:Q5ZLN8
NextBio:20820225 Uniprot:Q5ZLN8
Length = 591
Score = 302 (111.4 bits), Expect = 4.0e-26, P = 4.0e-26
Identities = 94/357 (26%), Positives = 168/357 (47%)
Query: 1 MIVPLEQKLDMLWSFIKAHLNSKILVFLTSCKQVKYVFEAFKKLRPGIPLMCLYGRMKQD 60
MI ++K + L F++ H K LVF ++C V+Y +A + L + +MC++G+MK
Sbjct: 247 MICKADEKFNQLVHFLRQHKQEKHLVFFSTCACVEYYGKALESLIKQVKIMCIHGKMKH- 305
Query: 61 RRMAIYAQFCEKRS-VLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYNS 119
+R I+ +F +L CTDV +RG+D + V WV+Q D P ++++HR GRTAR +
Sbjct: 306 KRNKIFTEFRRLAGGILVCTDVMARGIDIPE-VHWVLQYDPPSSASAFVHRCGRTARIGN 364
Query: 120 GGRSVLFLTPTEMKMLEKLR-EAKIPIHFTKANTKRLQPVSGLLAALLVKYPDMQHRAQK 178
G +++FL P E + L K P+ + L + L + L + + K
Sbjct: 365 AGSALVFLLPMEESYINFLSINQKCPMQEMQPQRNVLDLLPKLKSMALADRAVFE-KGMK 423
Query: 179 AFITYLRSVHIQKDKEVFDVTKLSIDEFSASLGLPMTPKIRFLNQKKGKMVP-VKPVLDN 237
AF++Y+++ + +F + L + L PK+ L +GK P PV N
Sbjct: 424 AFVSYIQAYAKHECNLIFRIKDLDFASLAKGFALLKMPKMPEL---RGKCFPDFTPVTVN 480
Query: 238 AEK---EDKLMISREKLLPDNFTEENVDRDILETKDIEDEGKADLLEDVMRAT-RVKKNK 293
+ +DK +REK ++ +R+ E EGK +++ + + K+ K
Sbjct: 481 TDSIPFKDK---NREKQRQKQLEQQRKERE-------ESEGKKKFIKNKSWSKQKAKREK 530
Query: 294 KLKINVHRPL--GTRLVFDEECNTVPPLAMLADTKNANVSLDQDQK--TEYYKKIRE 346
K K+ R G+ + ++ + +L K +S ++ +K T K +E
Sbjct: 531 KRKLTAKRKREEGSDMEDEDMEELLNDTRLLKRLKKGKISEEEFEKRLTGSQSKFKE 587
>MGI|MGI:1915098 [details] [associations]
symbol:Ddx55 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 55"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 MGI:MGI:1915098 GO:GO:0005524
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
InterPro:IPR025313 Pfam:PF13959 HSSP:P26196 CTD:57696
HOGENOM:HOG000268803 HOVERGEN:HBG107796 KO:K14809 OrthoDB:EOG4WH8KN
GeneTree:ENSGT00550000074969 OMA:CACVEYW EMBL:AK129402
EMBL:AK033741 EMBL:AK154422 EMBL:BC117786 EMBL:BC117787
IPI:IPI00453808 RefSeq:NP_080685.2 UniGene:Mm.281601
ProteinModelPortal:Q6ZPL9 SMR:Q6ZPL9 IntAct:Q6ZPL9 STRING:Q6ZPL9
PRIDE:Q6ZPL9 Ensembl:ENSMUST00000071057 GeneID:67848 KEGG:mmu:67848
UCSC:uc008zqc.2 InParanoid:Q6ZPL9 NextBio:325707 Bgee:Q6ZPL9
CleanEx:MM_DDX55 Genevestigator:Q6ZPL9
GermOnline:ENSMUSG00000029389 Uniprot:Q6ZPL9
Length = 600
Score = 300 (110.7 bits), Expect = 6.9e-26, P = 6.9e-26
Identities = 89/319 (27%), Positives = 158/319 (49%)
Query: 1 MIVPLEQKLDMLWSFIKAHLNSKILVFLTSCKQVKYVFEAFKKLRPGIPLMCLYGRMKQD 60
MI ++K + L F+++ K LVF ++C V+Y +A + L + ++C++G+MK
Sbjct: 247 MICKADEKFNQLVHFLRSRQQEKHLVFFSTCACVEYYGKALEALLKKVKILCIHGKMKY- 305
Query: 61 RRMAIYAQFCEKRS-VLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYNS 119
+R I+ +F + +S +L CTDV +RG+D + V+WV+Q D P + ++++HR GRTAR
Sbjct: 306 KRNKIFMEFRKLQSGILVCTDVMARGIDIPE-VNWVLQYDPPSNASAFVHRCGRTARIGH 364
Query: 120 GGRSVLFLTPTEMKMLEKLR-EAKIPIH--FTKANTKRLQPVSGLLAALLVKYPDMQHRA 176
GG +++FL P E + L K P+ + NT L P L A+ + + +
Sbjct: 365 GGSALVFLLPMEEAYINFLAINQKCPLQEMSLQRNTIDLLPK---LRAMALADRAVFEKG 421
Query: 177 QKAFITYLRSVHIQKDKEVFDVTKLSIDEFSASLGLPMTPKIRFLNQKK-GKMVPVKPVL 235
KAF++++++ + +F + L + L P++ L K+ VPV
Sbjct: 422 MKAFVSFVQAYAKHECSLIFRLKDLDFAGLARGFALLRMPRMPELRGKQFPDFVPVDIDT 481
Query: 236 DNAEKEDKLMIS-REKLLPDNFTEENVDRDILETKDIEDEGKADLLED-VMRATRVKKNK 293
D +DK+ R+KLL E + E+EG+ +++ + KK +
Sbjct: 482 DTIPFKDKIREKQRQKLLEQKRKERS-----------ENEGRKKFIKNKAWSKQKAKKER 530
Query: 294 KLKINVHRPLGTRLVFDEE 312
K K+N R D+E
Sbjct: 531 KKKMNAKRKKDEGSDIDDE 549
>RGD|2324094 [details] [associations]
symbol:Ddx55 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 55"
species:10116 "Rattus norvegicus" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 RGD:2324094
GO:GO:0005524 GO:GO:0003723 EMBL:CH473973 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 InterPro:IPR025313 Pfam:PF13959 CTD:57696 KO:K14809
OrthoDB:EOG4WH8KN GeneTree:ENSGT00550000074969 IPI:IPI00370890
RefSeq:NP_001258255.1 UniGene:Rn.209289 Ensembl:ENSRNOT00000001387
GeneID:100362764 KEGG:rno:100362764 UCSC:RGD:2324094 Uniprot:D3ZX56
Length = 600
Score = 299 (110.3 bits), Expect = 8.9e-26, P = 8.9e-26
Identities = 89/319 (27%), Positives = 157/319 (49%)
Query: 1 MIVPLEQKLDMLWSFIKAHLNSKILVFLTSCKQVKYVFEAFKKLRPGIPLMCLYGRMKQD 60
MI ++K + L F+++ K LVF ++C V+Y +A + L + ++C++G+MK
Sbjct: 247 MICKADEKFNQLVHFLRSRQQEKHLVFFSTCACVEYYGKALEALVQRVKILCIHGKMKY- 305
Query: 61 RRMAIYAQFCEKRS-VLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYNS 119
+R I+ +F + +S +L CTDV +RG+D + V+WV+Q D P + ++++HR GRTAR
Sbjct: 306 KRNKIFMEFRKLQSGILVCTDVMARGIDIPE-VNWVLQYDPPSNASAFVHRCGRTARIGH 364
Query: 120 GGRSVLFLTPTEMKMLEKLR-EAKIPIH--FTKANTKRLQPVSGLLAALLVKYPDMQHRA 176
GG +++FL P E + L K P+ + NT L P L A+ + + +
Sbjct: 365 GGSALVFLLPMEEAYINFLAINQKCPLQEMSLQRNTVDLLPK---LRAMALADRAVFEKG 421
Query: 177 QKAFITYLRSVHIQKDKEVFDVTKLSIDEFSASLGLPMTPKIRFLNQKK-GKMVPVKPVL 235
KAF++++++ + +F + L + L P++ L K+ VPV
Sbjct: 422 MKAFVSFVQAYAKHECSLIFRLKDLDFAGLARGFALLRMPRMPELKGKQFPDFVPVDIDT 481
Query: 236 DNAEKEDKLMIS-REKLLPDNFTEENVDRDILETKDIEDEGKADLLED-VMRATRVKKNK 293
D +DK+ R+KLL E E+EG+ +++ + KK +
Sbjct: 482 DTIPFKDKIREKQRQKLLEQKRKERT-----------ENEGRRKFIKNKAWSKQKAKKER 530
Query: 294 KLKINVHRPLGTRLVFDEE 312
K K+N R D+E
Sbjct: 531 KKKMNAKRKKDEGSDIDDE 549
>UNIPROTKB|H7C452 [details] [associations]
symbol:DDX18 "ATP-dependent RNA helicase DDX18"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
PROSITE:PS51192 GO:GO:0008026 HGNC:HGNC:2741 ChiTaRS:DDX18
EMBL:AC009312 EMBL:AC009404 ProteinModelPortal:H7C452 PRIDE:H7C452
Ensembl:ENST00000415038 Bgee:H7C452 Uniprot:H7C452
Length = 214
Score = 285 (105.4 bits), Expect = 4.6e-25, P = 4.6e-25
Identities = 56/125 (44%), Positives = 82/125 (65%)
Query: 23 KILVFLTSCKQVKYVFEAFKKLRPGIPLMCLYGRMKQDRRMAIYAQFCEKRS-VLFCTDV 81
K++VF +SC VKY +E + +P++ ++G+ KQ++R + QFC S L CTDV
Sbjct: 91 KLMVFFSSCMSVKYHYELLNYI--DLPVLAIHGKQKQNKRTTTFFQFCNADSGTLLCTDV 148
Query: 82 ASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTAR-YNSGGRSVLFLTPTEMKMLEKLRE 140
A+RGLD + VDW+VQ D P+D YIHRVGRTAR N G ++L L P E+ L L++
Sbjct: 149 AARGLDIPE-VDWIVQYDPPDDPKEYIHRVGRTARGLNGRGHALLILRPEELGFLRYLKQ 207
Query: 141 AKIPI 145
+K+P+
Sbjct: 208 SKVPL 212
>UNIPROTKB|E2R316 [details] [associations]
symbol:DDX55 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313
Pfam:PF13959 Ensembl:ENSCAFT00000035837 Uniprot:E2R316
Length = 483
Score = 286 (105.7 bits), Expect = 1.3e-23, P = 1.3e-23
Identities = 68/223 (30%), Positives = 122/223 (54%)
Query: 1 MIVPLEQKLDMLWSFIKAHLNSKILVFLTSCKQVKYVFEAFKKLRPGIPLMCLYGRMKQD 60
M+ ++K + L F++ H K L+F ++C V+Y +A + L + +MC++G+MK
Sbjct: 247 MVCKADEKFNQLVHFLRNHKQEKHLIFFSTCACVEYYGKALEALVKSVKIMCIHGKMKH- 305
Query: 61 RRMAIYAQFCEKRS-VLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYNS 119
+R I+ +F + +S +L CTDV +RG+D + V+WV+Q D P ++++HR GRTAR
Sbjct: 306 KRNKIFMEFRKLQSGILVCTDVMARGIDIPE-VNWVLQYDPPSSASAFVHRCGRTARIGH 364
Query: 120 GGRSVLFLTPTEMKMLEKLR-EAKIPIHFTKA--NTKRLQPVSGLLAALLVKYPDMQHRA 176
GG +++FL P E + L K P+ K NT L P L ++ + + +
Sbjct: 365 GGSALVFLLPMEESYVTFLEINQKCPLQEMKLQKNTGDLLPK---LKSMALADRAVFEKG 421
Query: 177 QKAFITYLRSVHIQKDKEVFDVTKLSIDEFSASLGLPMTPKIR 219
KAF++Y+++ + +F + + A L +P P++R
Sbjct: 422 MKAFVSYVQAYAKHECNLIFRLKAKILARGFALLRMPKMPELR 464
>ZFIN|ZDB-GENE-021212-1 [details] [associations]
symbol:ddx55 "DEAD (Asp-Glu-Ala-Asp) box polypeptide
55" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
ZFIN:ZDB-GENE-021212-1 GO:GO:0007275 GO:GO:0005524 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
InterPro:IPR025313 Pfam:PF13959 HSSP:P26196 CTD:57696
HOGENOM:HOG000268803 HOVERGEN:HBG107796 KO:K14809 OrthoDB:EOG4WH8KN
EMBL:AF506203 EMBL:BC059534 IPI:IPI00493927 RefSeq:NP_775336.1
UniGene:Dr.16883 ProteinModelPortal:Q8JHJ2 STRING:Q8JHJ2
GeneID:286745 KEGG:dre:286745 InParanoid:Q8JHJ2 NextBio:20806420
ArrayExpress:Q8JHJ2 Uniprot:Q8JHJ2
Length = 593
Score = 288 (106.4 bits), Expect = 1.4e-23, P = 1.4e-23
Identities = 86/295 (29%), Positives = 151/295 (51%)
Query: 6 EQKLDMLWSFIKAHLNSKILVFLTSCKQVKYVFEAFKKLRPGIPLMCLYGRMKQDRRMAI 65
E+K + L +F++ H + K LVF ++C V+Y +A + L + + C++G+MK +R I
Sbjct: 252 EEKFNTLVAFLRQHKHEKQLVFFSTCACVEYFGKALEVLVKNVSIHCIHGKMKH-KRNKI 310
Query: 66 YAQF-CEKRSVLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYNSGGRSV 124
+A F K +L CTDV +RG+D + V+WV+Q D P +S++HR GRTAR + G ++
Sbjct: 311 FADFRALKSGILVCTDVMARGIDIPE-VNWVLQYDPPSSASSFVHRCGRTARIGNQGNAL 369
Query: 125 LFLTPTEMKMLEKLR-EAKIPIHFTKANTKRLQPVSGLLAALLVKYPDMQHRAQKAFITY 183
+FL P E + L K P+ + ++ K + V L A+ + M + +AF++Y
Sbjct: 370 VFLLPMEESYVNFLSINQKCPLQ-SFSSVKDVVDVLPKLKAMALGDRAMFEKGMRAFVSY 428
Query: 184 LRSVHIQKDKEVFDVTKLSIDEFSASLGLPMTPKIRFLNQKKGKMVPVKPVLD-NAEKED 242
+++ + +F + L + L PK+ L +GK P D AE D
Sbjct: 429 VQAYAKHECSLIFRIKDLDFAALARGFALLRLPKMPEL---RGKTFP-----DFKAEAID 480
Query: 243 KLMISREKLLPDNFTEENVDRDILETKDIEDEGKADLLED-VMRATRVKKNKKLK 296
I R K D E+ + + E K+ E + + +++ ++KK++K K
Sbjct: 481 TDTI-RFK---DKNREKQRQKWLAEQKEKEVPLRKNFIKNKAWSKQKIKKDRKKK 531
>TAIR|locus:2153564 [details] [associations]
symbol:AT5G05450 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:AB010692 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 InterPro:IPR025313 Pfam:PF13959
HOGENOM:HOG000268803 KO:K14809 EMBL:AJ010469 IPI:IPI00516547
PIR:T51344 RefSeq:NP_196164.1 UniGene:At.23004
ProteinModelPortal:Q9FLB0 SMR:Q9FLB0 PaxDb:Q9FLB0 PRIDE:Q9FLB0
EnsemblPlants:AT5G05450.1 GeneID:830428 KEGG:ath:AT5G05450
GeneFarm:935 TAIR:At5g05450 InParanoid:Q9FLB0 OMA:MDSSANI
PhylomeDB:Q9FLB0 ProtClustDB:CLSN2679231 Genevestigator:Q9FLB0
GermOnline:AT5G05450 Uniprot:Q9FLB0
Length = 593
Score = 261 (96.9 bits), Expect = 5.5e-20, P = 5.5e-20
Identities = 84/298 (28%), Positives = 141/298 (47%)
Query: 6 EQKLDMLWSFIKAHLNSKILVFLTSCKQVKY---VFEAFKKLRPGIPLMCLYGRMKQDRR 62
++K L + + + K++VF +C V Y V L+ I L+ ++G MKQ+ R
Sbjct: 259 DKKSSQLVDLLIKNSDKKLIVFFMTCASVDYWGLVLSKIPALK-SISLIPIHGDMKQNAR 317
Query: 63 MAIYAQFCEKRS-VLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYNSGG 121
A F + S L CTDVA+RGLD +D+VVQ D P+D + HR GRTAR G
Sbjct: 318 DKALASFTKASSGALLCTDVAARGLDI-PGIDYVVQYDPPQDPNMFNHRAGRTARLGRQG 376
Query: 122 RSVLFLTPTEMKMLEKLREAKIPIHFTKANTKRLQPVSGLLAALLVKYPDMQHRAQKAFI 181
R+++FL P E +E +R ++P+ K + + V ++ + +K + + KAF+
Sbjct: 377 RAIVFLLPKEEAYVEFMRIRRVPLEERKCS-EDASDVIPIIRSAAMKDRAVMEKGLKAFV 435
Query: 182 TYLRSVHIQKDKEVFDVTKLSIDEFSASLGLPMTPKIRFLNQKKGK---MVPVKPV-LDN 237
+++R+ +F L I + + GL P + + Q + PV+ V +
Sbjct: 436 SFVRAYKEHHCSFIFRWKDLEIGKLAMGYGLLYLPSMSEVKQHRLSSEGFTPVEGVKFEE 495
Query: 238 AEKEDKLMISREKLLPDNFTEENVDRDILETKDIEDEGKADLLEDVMRATRVKKNKKL 295
+ +DK REK N R E K +++GK ++ K ++KL
Sbjct: 496 IKFKDKY---REKQRQQNLQVRKEKRQ--EEK--KEKGKRKRVDASASNDPKKASRKL 546
>UNIPROTKB|I3LGI1 [details] [associations]
symbol:I3LGI1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR001650 Pfam:PF00271
PROSITE:PS51194 GO:GO:0005524 GO:GO:0003676 GO:GO:0004386
GeneTree:ENSGT00550000074980 EMBL:CU930036
Ensembl:ENSSSCT00000031341 OMA:SDEKIFC Uniprot:I3LGI1
Length = 119
Score = 236 (88.1 bits), Expect = 1.8e-19, P = 1.8e-19
Identities = 41/87 (47%), Positives = 67/87 (77%)
Query: 1 MIVPLEQKLDMLWSFIKAHLNSKILVFLTSCKQVKYVFEAFKKLRPGIPLMCLYGRMKQD 60
++ L+QK+ +L+SF+++HL K +VF +SCK+V+Y++ F +LRPGI ++ L+GR +Q
Sbjct: 18 IVCELQQKISVLYSFLRSHLKKKSIVFFSSCKEVQYLYRVFCRLRPGISILALHGRQQQM 77
Query: 61 RRMAIYAQFCEKRS-VLFCTDVASRGL 86
RRM +Y +F K++ VLF TD+A+RGL
Sbjct: 78 RRMEVYNEFVRKKAAVLFATDIAARGL 104
>FB|FBgn0037561 [details] [associations]
symbol:CG9630 species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 EMBL:AE014297 GO:GO:0005524 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
InterPro:IPR025313 Pfam:PF13959 HSSP:P10081 KO:K14809
GeneTree:ENSGT00550000074969 EMBL:AY051513 RefSeq:NP_649777.1
UniGene:Dm.1101 ProteinModelPortal:Q9VHU1 SMR:Q9VHU1 IntAct:Q9VHU1
STRING:Q9VHU1 PaxDb:Q9VHU1 PRIDE:Q9VHU1 EnsemblMetazoa:FBtr0081866
GeneID:40974 KEGG:dme:Dmel_CG9630 UCSC:CG9630-RA
FlyBase:FBgn0037561 InParanoid:Q9VHU1 OMA:CACVEYW OrthoDB:EOG4TDZ1Q
PhylomeDB:Q9VHU1 GenomeRNAi:40974 NextBio:821545 Bgee:Q9VHU1
GermOnline:CG9630 Uniprot:Q9VHU1
Length = 613
Score = 249 (92.7 bits), Expect = 2.8e-18, Sum P(2) = 2.8e-18
Identities = 69/237 (29%), Positives = 123/237 (51%)
Query: 2 IVPLEQKLDMLWSFIK--AHLNSKILVFLTSCKQVKYVFEAFKKLRPGIPLMCLYGRMKQ 59
IV E K L F+ A + K++VF +C V+Y EA L P ++ ++G+MK
Sbjct: 245 IVEPELKFVALLEFLSSPATVIGKVMVFFPTCACVEYWAEALPPLLPKRTVLGIHGKMK- 303
Query: 60 DRRMAIYAQFCEK-RSVLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYN 118
++R + +F ++VL CTDV +RGLD + ++WVVQ D P +S++HRVGRTAR
Sbjct: 304 NKRANVVEKFRNTPQAVLLCTDVLARGLDVPE-IEWVVQWDPPSTASSFVHRVGRTARQG 362
Query: 119 SGGRSVLFLTPTE------MKMLEKLREAKIPIHFTK---ANTKRLQPVSGLLAALLVKY 169
+ G +++FL P+E +K+ +K+ K+ + K+L V L L
Sbjct: 363 NEGNALVFLLPSEDAYVHFLKINQKVELTKLLTEEAEDADREKKKLPAVLDQLHRLQAAD 422
Query: 170 PDMQHRAQKAFITYLRSVHIQKDKEVFDVTKLSIDEFSASLGLPMTPKIRFLNQKKG 226
+ + +AF++++R+ + + + L + + + + GL P++ L +G
Sbjct: 423 KGVYDKGMRAFVSHVRAYTKHECSAILRLKDLDLGKMATAYGLLQLPRMPELKNYQG 479
Score = 37 (18.1 bits), Expect = 2.8e-18, Sum P(2) = 2.8e-18
Identities = 8/21 (38%), Positives = 14/21 (66%)
Query: 331 SLDQDQKTEYYKKIREELKRA 351
S DQ +K + K ++EL++A
Sbjct: 530 SWDQTKKAKLDAKSKKELRKA 550
Score = 37 (18.1 bits), Expect = 2.8e-18, Sum P(2) = 2.8e-18
Identities = 9/36 (25%), Positives = 17/36 (47%)
Query: 269 KDIEDEGKADLLEDVMRATRVKKNKKLKINVHRPLG 304
+ E +L D+ R+KKNK + + + +G
Sbjct: 572 QQFSQEDLDELASDIRLFKRLKKNKISEEDFDKAMG 607
>WB|WBGene00013983 [details] [associations]
symbol:ZK512.2 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0017038 "protein import" evidence=IEA]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 GO:GO:0000003 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
EMBL:Z22177 eggNOG:COG0513 PROSITE:PS51195 InterPro:IPR025313
Pfam:PF13959 HOGENOM:HOG000268803 KO:K14809 PIR:B88549 PIR:S40763
RefSeq:NP_001254980.1 ProteinModelPortal:P34640 SMR:P34640
STRING:P34640 PaxDb:P34640 EnsemblMetazoa:ZK512.2a.1
EnsemblMetazoa:ZK512.2a.2 GeneID:176292 KEGG:cel:CELE_ZK512.2
UCSC:ZK512.2 CTD:176292 WormBase:ZK512.2
GeneTree:ENSGT00550000074969 InParanoid:P34640 OMA:HEKKVET
NextBio:891956 Uniprot:P34640
Length = 578
Score = 244 (91.0 bits), Expect = 5.3e-18, P = 5.3e-18
Identities = 67/277 (24%), Positives = 136/277 (49%)
Query: 6 EQKLDMLWSFIKAHLNSKILVFLTSCKQVKYVFEAFKKLRPGIPLMCLYGRMKQDRRMAI 65
++K + FI+ + KIL+F SC V+Y ++ F++ PL ++G+ R +
Sbjct: 242 DEKTSVCLEFIRQRTDKKILIFFPSCNSVRYFYKIFERCLGKRPLFAVHGKCSNPHRASQ 301
Query: 66 YAQFCEKRS-VLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYNSGGRSV 124
F + + V+ TDV +RG+D + +DWV+Q D P+ + ++HR GRTAR G ++
Sbjct: 302 IKAFSDSTNGVMISTDVMARGIDISD-IDWVIQFDLPKHSSWFVHRAGRTARCGREGNAL 360
Query: 125 LFLTPTEMKMLE--------KLREAKIPIHFTKANTKRLQPVSGLLAALLVKYPDMQHRA 176
+ + ++ + KL E K+P + N+++ + + + + V +
Sbjct: 361 ILIASEQLAYVNFLDNHEKVKLDEIKVPTN----NSRKSEELRQKMIKIQVSDRAILEAG 416
Query: 177 QKAFITYLRSVHIQKDKEVFDVTKLSIDEFSASLGLPMTPKIRFLNQKKGKMVPVKPVLD 236
+AF++++ S + + L++ + S L PK+R L+Q+K + + ++
Sbjct: 417 TRAFVSHVESYAKHDCHLICSLDDLNVVGLANSYALLRLPKMRELSQRKDLDMFDRSAIE 476
Query: 237 NAE---KEDKLMISREKLLPDNFTEENVDRDILETKD 270
+E + KL +RE ++ + E+ V+ L KD
Sbjct: 477 TSEIKYADVKLEANRETVMKEKH-EKKVET--LAAKD 510
>ZFIN|ZDB-GENE-030131-3973 [details] [associations]
symbol:ddx31 "DEAD (Asp-Glu-Ala-Asp) box
polypeptide 31" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-030131-3973 GO:GO:0005524 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313 Pfam:PF13959
KO:K14806 HOGENOM:HOG000268799 GeneTree:ENSGT00550000075041
CTD:64794 HOVERGEN:HBG103793 OrthoDB:EOG42V8FK EMBL:BX276128
IPI:IPI00614096 RefSeq:XP_683832.1 UniGene:Dr.79241
Ensembl:ENSDART00000148314 GeneID:325248 KEGG:dre:325248
InParanoid:A2BFD2 NextBio:20809193 Uniprot:A2BFD2
Length = 739
Score = 243 (90.6 bits), Expect = 1.1e-17, P = 1.1e-17
Identities = 58/162 (35%), Positives = 91/162 (56%)
Query: 1 MIVPLEQKLDMLWSFI----KAHLNSKILVFLTSCKQVKYVFEAFKKLRPGIP------- 49
++VP + L L +FI K K+++F++SC+ V+++ F + IP
Sbjct: 403 VVVPSKLHLVCLAAFILAKCKFEQRQKLIIFISSCEAVEFLLNLFTAVLCEIPSNTSSKS 462
Query: 50 LMCL-----YGRMKQDRRMAIYAQFCE-KRSVLFCTDVASRGLDFNKAVDWVVQVDCPED 103
CL +G M+Q+ R ++ +F + K +L CTDVA+RGLD + V W+VQ + P
Sbjct: 463 TSCLNFYRLHGNMRQEERTEVFQEFSQCKTGILLCTDVAARGLDLPQ-VTWIVQYNPPVS 521
Query: 104 VASYIHRVGRTARYNSGGRSVLFLTPTEMKMLEKLREAKIPI 145
A Y+HRVGRTAR + G S+LFLTP+E ++ L I +
Sbjct: 522 AAEYVHRVGRTARIGAQGSSLLFLTPSETAFVDVLANHNISL 563
>POMBASE|SPBC24C6.02 [details] [associations]
symbol:SPBC24C6.02 "ATP-dependent RNA helicase Spb4
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005730 "nucleolus" evidence=ISO;IDA] [GO:0006364 "rRNA
processing" evidence=ISO] [GO:0042254 "ribosome biogenesis"
evidence=ISS] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
PomBase:SPBC24C6.02 GO:GO:0005524 GO:GO:0005730 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
InterPro:IPR025313 Pfam:PF13959 HOGENOM:HOG000268803 KO:K14809
OMA:CACVEYW OrthoDB:EOG46MFT3 PIR:T39966 RefSeq:NP_595956.1
ProteinModelPortal:O74764 STRING:O74764 EnsemblFungi:SPBC24C6.02.1
GeneID:2540598 KEGG:spo:SPBC24C6.02 NextBio:20801723 Uniprot:O74764
Length = 606
Score = 231 (86.4 bits), Expect = 1.1e-16, Sum P(2) = 1.1e-16
Identities = 66/232 (28%), Positives = 117/232 (50%)
Query: 1 MIVPLEQKLDMLWSFIKAHLNSKILVFLTSCKQVKYVFEAFKKLRPGIPLMCLYGRMKQD 60
+++P K+ + + K +VF +SC V+Y F + ++ L+G+ Q
Sbjct: 236 LVIPPIYKVQCMIHLLCTIEYEKAIVFFSSCASVEYFNSLFLTYKLPFEIVALHGQQVQS 295
Query: 61 RRMAIYAQF--CEKRSVLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYN 118
R + +F K++VLF TD+ASRGLD VD+V+Q+D P D S+ HR GR R
Sbjct: 296 NRSRNFEKFKKSNKKTVLFTTDIASRGLDIPN-VDFVLQLDPPLDPKSFSHRCGRAGRAG 354
Query: 119 SGGRSVLFLTP-TEMKMLEKLREAKIPIHFTKANT-------KRLQPVSGLLAALLVKYP 170
G +++ L E + E LR K+PI T+ +T RL+ ++ L ++ K
Sbjct: 355 RAGVAIVLLNDGREEEYEELLRVRKVPI--TRIDTPIEALDLSRLKVLTHELRKIVSKDR 412
Query: 171 DMQHRAQKAFITYLRSVHIQKDKEVFDVTKLSIDEFS---ASLGLPMTPKIR 219
D+ + +AF++++R+ +F + L + + + A L LP P+++
Sbjct: 413 DLYDKGLRAFVSHVRAYTKHHASFIFRIKDLDLGQLATAYALLHLPKMPELK 464
Score = 43 (20.2 bits), Expect = 1.1e-16, Sum P(2) = 1.1e-16
Identities = 18/75 (24%), Positives = 37/75 (49%)
Query: 222 NQKKGKMVPVKPVLDNAEKEDKLMISREKLLPDNFTEENVDRDILETKDIEDEGKADLLE 281
N ++ K K L A+K + +++++ +E + D++ D E + ++L E
Sbjct: 530 NTRREKRKSKKEFL-KAQKNEASNNLKQEIVSKAGAQETENDDLI---DEESDALSELEE 585
Query: 282 DVMRATRVKKNKKLK 296
D + +KK+KK K
Sbjct: 586 DYRQ---LKKSKKRK 597
>TAIR|locus:2064844 [details] [associations]
symbol:AT2G40700 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0006312
"mitotic recombination" evidence=RCA] [GO:0006406 "mRNA export from
nucleus" evidence=RCA] [GO:0006606 "protein import into nucleus"
evidence=RCA] [GO:0006626 "protein targeting to mitochondrion"
evidence=RCA] [GO:0009560 "embryo sac egg cell differentiation"
evidence=RCA] [GO:0009561 "megagametogenesis" evidence=RCA]
[GO:0009640 "photomorphogenesis" evidence=RCA] [GO:0010388 "cullin
deneddylation" evidence=RCA] [GO:0042991 "transcription factor
import into nucleus" evidence=RCA] [GO:0051604 "protein maturation"
evidence=RCA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
InterPro:IPR025313 Pfam:PF13959 KO:K14806 HOGENOM:HOG000268799
EMBL:AJ010468 IPI:IPI00518934 PIR:G84832 PIR:T51746
RefSeq:NP_181602.1 UniGene:At.47 ProteinModelPortal:Q7XJN0
SMR:Q7XJN0 STRING:Q7XJN0 PaxDb:Q7XJN0 PRIDE:Q7XJN0
EnsemblPlants:AT2G40700.1 GeneID:818665 KEGG:ath:AT2G40700
GeneFarm:934 TAIR:At2g40700 InParanoid:Q7XJN0 OMA:HRFHWIV
PhylomeDB:Q7XJN0 ProtClustDB:CLSN2683635 Genevestigator:Q7XJN0
GermOnline:AT2G40700 Uniprot:Q7XJN0
Length = 609
Score = 209 (78.6 bits), Expect = 3.8e-16, Sum P(2) = 3.8e-16
Identities = 42/89 (47%), Positives = 61/89 (68%)
Query: 53 LYGRMKQDRRMAIYAQF-CEKRSVLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRV 111
L+G M+Q+ R + + F EK++VL TDVA+RGLDF K V ++Q DCP + Y+HRV
Sbjct: 379 LHGSMEQEDRRSAFGTFKTEKQAVLLSTDVAARGLDFPK-VRCIIQYDCPGEATEYVHRV 437
Query: 112 GRTARYNSGGRSVLFLTPTEMKMLEKLRE 140
GRTAR G ++LFL P E+ L++L++
Sbjct: 438 GRTARIGEKGEALLFLQPIEIDYLKELKK 466
Score = 63 (27.2 bits), Expect = 3.8e-16, Sum P(2) = 3.8e-16
Identities = 17/59 (28%), Positives = 30/59 (50%)
Query: 162 LAALLVKYPDMQHRAQKAFITYLR--SVHIQKDKEVFDVTKLSIDEFSASLGLPMTPKI 218
L +L P M+ A+ AF++++R + H + K +F V KL + + S L P +
Sbjct: 511 LESLTYAEPKMKSLAKNAFVSWVRGYAAHKGELKSIFVVKKLHLGHVAKSFALREQPSL 569
>UNIPROTKB|F1N5H8 [details] [associations]
symbol:DDX31 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313 Pfam:PF13959
GeneTree:ENSGT00550000075041 OMA:ARIGCHG EMBL:DAAA02032283
IPI:IPI00837660 UniGene:Bt.35580 ProteinModelPortal:F1N5H8
PRIDE:F1N5H8 Ensembl:ENSBTAT00000042916 Uniprot:F1N5H8
Length = 736
Score = 217 (81.4 bits), Expect = 7.3e-16, Sum P(2) = 7.3e-16
Identities = 53/150 (35%), Positives = 81/150 (54%)
Query: 17 KAHLNSKILVFLTSCKQVKYVFEAFKK--------LRP------GIPL--MCLYGRMKQD 60
K + K++VF +SC+ V++ + F + L P PL + L+ ++Q+
Sbjct: 408 KFERDQKVIVFFSSCELVEFHYTLFLQTLLSGSGALAPEHLPSTSTPLKFLRLHSALEQE 467
Query: 61 RRMAIYAQFCE-KRSVLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYNS 119
R A++ F K +LFCTD+A+RGLD + V W+VQ + P A YIHR+GRTAR
Sbjct: 468 ERTAVFQDFTHSKTGILFCTDIAARGLDLPQ-VTWIVQYNAPSSPAEYIHRIGRTARIGC 526
Query: 120 GGRSVLFLTPTEMKMLEKLREAKIPIHFTK 149
G S+L L P+E + + L KI + K
Sbjct: 527 HGSSLLVLAPSEAEYVNSLASHKINVSEVK 556
Score = 54 (24.1 bits), Expect = 7.3e-16, Sum P(2) = 7.3e-16
Identities = 18/71 (25%), Positives = 34/71 (47%)
Query: 176 AQKAFITYLRS--VHIQKDKEVFDVTKLSIDEFSASLGLPMTPKIRFLNQKKGKMVPVK- 232
A+KA +++R+ + ++ K +F + L + + S GL PK + K K +K
Sbjct: 613 AKKALQSFIRAYATYPRELKHIFHIRLLHLGHMAKSFGLRDAPKNLCASAMKKKKANLKR 672
Query: 233 PVLDNAEKEDK 243
P L + + K
Sbjct: 673 PDLQRKKTQSK 683
>UNIPROTKB|F1S0U0 [details] [associations]
symbol:DDX31 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313 Pfam:PF13959
GeneTree:ENSGT00550000075041 OMA:ARIGCHG EMBL:CU326339
Ensembl:ENSSSCT00000006300 Uniprot:F1S0U0
Length = 784
Score = 219 (82.2 bits), Expect = 2.2e-15, Sum P(2) = 2.2e-15
Identities = 53/142 (37%), Positives = 79/142 (55%)
Query: 21 NSKILVFLTSCKQVKYVFEAFKK--------LRPG-IP-------LMCLYGRMKQDRRMA 64
+ K++VF +SC+ V++ F + L PG +P + L+G M+Q+ R A
Sbjct: 467 DQKMIVFFSSCELVEFHHSLFLQTLLGGSGALAPGRLPSASPPLTFLRLHGDMEQEERTA 526
Query: 65 IYAQFCE-KRSVLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYNSGGRS 123
++ +F K VL CTDVA+RGLD + V W+VQ P A Y+HR+GRTAR G S
Sbjct: 527 VFQEFSRSKAGVLLCTDVAARGLDLPQ-VTWIVQYTAPSSPAEYVHRIGRTARIGFQGSS 585
Query: 124 VLFLTPTEMKMLEKLREAKIPI 145
+L L P+E + + L KI +
Sbjct: 586 LLILAPSEAEYVNSLASHKIKV 607
Score = 48 (22.0 bits), Expect = 2.2e-15, Sum P(2) = 2.2e-15
Identities = 13/44 (29%), Positives = 24/44 (54%)
Query: 176 AQKAFITYLRS--VHIQKDKEVFDVTKLSIDEFSASLGLPMTPK 217
A+KA +++R+ + ++ K +F V L + + S GL PK
Sbjct: 668 AKKALQSFVRAYATYPRELKHIFHVRSLHLGHVAKSFGLRDAPK 711
>TAIR|locus:2159527 [details] [associations]
symbol:STRS2 "STRESS RESPONSE SUPPRESSOR 2" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA;ISS] [GO:0003723 "RNA binding" evidence=IDA]
[GO:0009409 "response to cold" evidence=IEP] [GO:0009414 "response
to water deprivation" evidence=IMP] [GO:0009651 "response to salt
stress" evidence=IMP] [GO:0042991 "transcription factor import into
nucleus" evidence=RCA] InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0009651 GO:GO:0009409 GO:GO:0009414 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268799 EMBL:AB006697 EMBL:AJ010473 EMBL:AY035114
EMBL:AY142638 IPI:IPI00534387 PIR:T51348 RefSeq:NP_196479.1
UniGene:At.47465 ProteinModelPortal:Q94C75 SMR:Q94C75 STRING:Q94C75
PRIDE:Q94C75 EnsemblPlants:AT5G08620.1 GeneID:830763
KEGG:ath:AT5G08620 GeneFarm:945 TAIR:At5g08620 InParanoid:Q94C75
OMA:RELACQA PhylomeDB:Q94C75 ProtClustDB:CLSN2687472
Genevestigator:Q94C75 GermOnline:AT5G08620 Uniprot:Q94C75
Length = 563
Score = 221 (82.9 bits), Expect = 2.2e-15, P = 2.2e-15
Identities = 72/241 (29%), Positives = 120/241 (49%)
Query: 1 MIVPLEQKLDMLWSFIKAHLNS----KILVFLTSCKQVKYVFEAFKKLRPGIPLMCLYGR 56
MI L++ +L+ +K H+ K+++F T+ + V + KL + + ++ R
Sbjct: 314 MIASLDRHFSLLYGLLKKHITDNVGYKVIIFCTTAMVTRLVADLLGKL--SLNVREIHSR 371
Query: 57 MKQDRRMAIYAQFCEKRSVLFCT-DVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTA 115
Q R + +F + +S++ T DV++RG+D+ V VVQ+ P D YIHR+GRT
Sbjct: 372 KPQSYRTRVSDEFRKSKSIILVTSDVSARGVDYPD-VSLVVQMGLPSDREQYIHRLGRTG 430
Query: 116 RYNSGGRSVLFLTPTEMKMLEKLREAKIPIHFTKANTKRL--QPVSGLLAALLVKYPDMQ 173
R G VL L P E L +++ +PI TK++ + + V + L+ +
Sbjct: 431 RKGKEGEGVLLLAPWEEYFLSSVKD--LPI--TKSSLPPIDHEAVKKVQKGLIQVEMTNK 486
Query: 174 HRAQKAFITYLRSVHIQKDKEVFDVTKLS--IDEFSASLGLPMTPKI--RFLNQKKGKMV 229
A +A++ Y +S QK K D T+L +EFS S+GL + P I L + K V
Sbjct: 487 EAAYQAWLGYYKS---QK-KIARDTTRLVELANEFSRSMGLSIPPAIPVNILGKMGLKNV 542
Query: 230 P 230
P
Sbjct: 543 P 543
>UNIPROTKB|F8WAJ0 [details] [associations]
symbol:DDX31 "Probable ATP-dependent RNA helicase DDX31"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:AL354735 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
InterPro:IPR025313 Pfam:PF13959 EMBL:AL160165 HGNC:HGNC:16715
IPI:IPI01010837 ProteinModelPortal:F8WAJ0 SMR:F8WAJ0
Ensembl:ENST00000438527 ArrayExpress:F8WAJ0 Bgee:F8WAJ0
Uniprot:F8WAJ0
Length = 722
Score = 219 (82.2 bits), Expect = 6.1e-15, P = 6.1e-15
Identities = 52/142 (36%), Positives = 79/142 (55%)
Query: 21 NSKILVFLTSCKQVKYVFEAFKKL---RPGIP-------------LMCLYGRMKQDRRMA 64
+ K++VF +SC+ V++ + F + G P + L+G M+Q+ R A
Sbjct: 381 DQKMVVFFSSCELVEFHYSLFLQTLLSSSGAPASGQLPSASMRLKFLRLHGGMEQEERTA 440
Query: 65 IYAQFCE-KRSVLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYNSGGRS 123
++ +F +R VL CTDVA+RGLD + V W+VQ + P A YIHR+GRTAR G S
Sbjct: 441 VFQEFSHSRRGVLLCTDVAARGLDLPQ-VTWIVQYNAPSSPAEYIHRIGRTARIGCHGSS 499
Query: 124 VLFLTPTEMKMLEKLREAKIPI 145
+L L P+E + + L KI +
Sbjct: 500 LLILAPSEAEYVNSLASHKINV 521
>UNIPROTKB|Q9H8H2 [details] [associations]
symbol:DDX31 "Probable ATP-dependent RNA helicase DDX31"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:AL354735 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 InterPro:IPR025313 Pfam:PF13959 KO:K14806
EMBL:AF427339 EMBL:AF335567 EMBL:AF335568 EMBL:AF335569
EMBL:AK023695 EMBL:AK027002 EMBL:AK027484 EMBL:AL160165
EMBL:BC012726 IPI:IPI00043990 IPI:IPI00291296 IPI:IPI00552374
IPI:IPI00552716 RefSeq:NP_073616.6 RefSeq:NP_619526.1
UniGene:Hs.660767 ProteinModelPortal:Q9H8H2 SMR:Q9H8H2
IntAct:Q9H8H2 PhosphoSite:Q9H8H2 DMDM:71153334 SWISS-2DPAGE:Q9H8H2
PaxDb:Q9H8H2 PRIDE:Q9H8H2 DNASU:64794 Ensembl:ENST00000310532
Ensembl:ENST00000372153 Ensembl:ENST00000372155
Ensembl:ENST00000372159 GeneID:64794 KEGG:hsa:64794 UCSC:uc004cbq.1
UCSC:uc004cbs.2 UCSC:uc010mzu.1 CTD:64794 GeneCards:GC09M135468
HGNC:HGNC:16715 HPA:HPA020891 neXtProt:NX_Q9H8H2 PharmGKB:PA27218
HOVERGEN:HBG103793 InParanoid:Q9H8H2 OMA:ARIGCHG OrthoDB:EOG42V8FK
PhylomeDB:Q9H8H2 GenomeRNAi:64794 NextBio:66862 ArrayExpress:Q9H8H2
Bgee:Q9H8H2 CleanEx:HS_DDX31 Genevestigator:Q9H8H2
GermOnline:ENSG00000125485 Uniprot:Q9H8H2
Length = 851
Score = 219 (82.2 bits), Expect = 7.9e-15, P = 7.9e-15
Identities = 52/142 (36%), Positives = 79/142 (55%)
Query: 21 NSKILVFLTSCKQVKYVFEAFKKL---RPGIP-------------LMCLYGRMKQDRRMA 64
+ K++VF +SC+ V++ + F + G P + L+G M+Q+ R A
Sbjct: 510 DQKMVVFFSSCELVEFHYSLFLQTLLSSSGAPASGQLPSASMRLKFLRLHGGMEQEERTA 569
Query: 65 IYAQFCE-KRSVLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYNSGGRS 123
++ +F +R VL CTDVA+RGLD + V W+VQ + P A YIHR+GRTAR G S
Sbjct: 570 VFQEFSHSRRGVLLCTDVAARGLDLPQ-VTWIVQYNAPSSPAEYIHRIGRTARIGCHGSS 628
Query: 124 VLFLTPTEMKMLEKLREAKIPI 145
+L L P+E + + L KI +
Sbjct: 629 LLILAPSEAEYVNSLASHKINV 650
>UNIPROTKB|F1NM06 [details] [associations]
symbol:DDX31 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313 Pfam:PF13959
GeneTree:ENSGT00550000075041 OMA:ARIGCHG EMBL:AADN02026504
EMBL:AADN02026505 EMBL:AADN02026506 EMBL:AADN02026507
EMBL:AADN02026508 EMBL:AADN02026509 EMBL:AADN02026510
IPI:IPI00573288 ProteinModelPortal:F1NM06
Ensembl:ENSGALT00000005588 Uniprot:F1NM06
Length = 690
Score = 217 (81.4 bits), Expect = 9.4e-15, P = 9.4e-15
Identities = 49/140 (35%), Positives = 78/140 (55%)
Query: 23 KILVFLTSCKQVKYVFEAFKKLRPG----------------IPLMCLYGRMKQDRRMAIY 66
K+++F +SC+QV++ +E + G + + L+G M+Q+ R ++
Sbjct: 378 KMIIFFSSCEQVEFHYELLVNVLSGELESEQPKRSSVSSVQLQFLRLHGNMEQEERTEVF 437
Query: 67 AQFCE-KRSVLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYNSGGRSVL 125
+F + K +L CTDVA+RGLD + V W+VQ + P A YIHR+GRTAR G S+L
Sbjct: 438 QEFLKSKTGILLCTDVAARGLDLPQ-VTWIVQYNAPASPAEYIHRIGRTARIGCHGNSLL 496
Query: 126 FLTPTEMKMLEKLREAKIPI 145
L P+E + + L KI +
Sbjct: 497 VLAPSEAEYVSLLASHKINV 516
>POMBASE|SPBC21H7.04 [details] [associations]
symbol:dbp7 "ATP-dependent RNA helicase Dbp7
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=ISO;IDA] [GO:0006364 "rRNA processing" evidence=ISO]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 PomBase:SPBC21H7.04
GO:GO:0005524 GO:GO:0005730 EMBL:CU329671 GenomeReviews:CU329671_GR
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 InterPro:IPR025313 Pfam:PF13959 KO:K14806
HOGENOM:HOG000268799 OrthoDB:EOG4W6S47 PIR:T39930
RefSeq:NP_595929.1 ProteinModelPortal:O60173 STRING:O60173
EnsemblFungi:SPBC21H7.04.1 GeneID:2540518 KEGG:spo:SPBC21H7.04
NextBio:20801645 Uniprot:O60173
Length = 709
Score = 163 (62.4 bits), Expect = 9.9e-15, Sum P(3) = 9.9e-15
Identities = 45/118 (38%), Positives = 60/118 (50%)
Query: 53 LYGRMKQDRRMAIYAQFCEKRS----VLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYI 108
L+G + Q R + F +L CTDVA+RGLD VD VVQ D P Y+
Sbjct: 473 LHGSLSQQIRTSTLNLFSSSEDSGSHILLCTDVAARGLDLPN-VDLVVQYDAPFSTDDYL 531
Query: 109 HRVGRTARYNSGGRSVLFLTPTEMKMLEKLREAKIPIHFTKANTKRLQP--VSGLLAA 164
HR+GRTAR G +++FL P E + + L+ + AN QP SGLL+A
Sbjct: 532 HRIGRTARAGHNGAAIMFLLPKESEYINLLKSS------VSANILE-QPNGPSGLLSA 582
Score = 72 (30.4 bits), Expect = 9.9e-15, Sum P(3) = 9.9e-15
Identities = 24/105 (22%), Positives = 49/105 (46%)
Query: 162 LAALLVKYPDMQHRAQKAFITYLRS--VHIQKDKEVFDVTKLSIDEFSASLGLPMTP-KI 218
L +++ M++ A++AF +Y+R+ H+ ++ +F++ L + + S L P KI
Sbjct: 605 LERFILENEPMRNIAKRAFTSYVRAYATHLSSERSIFNMRDLHLGHIAKSFALREAPGKI 664
Query: 219 RFLNQKKGKMV--PVKPVLDNAEKEDKLMISREKLLPDNFTEENV 261
N K + V + K+ ++ R K + TE N+
Sbjct: 665 SGANSSKPRKQGGSVDKGKSKSSKDIAALMHR-KAMEHYSTEHNI 708
Score = 70 (29.7 bits), Expect = 9.9e-15, Sum P(3) = 9.9e-15
Identities = 15/44 (34%), Positives = 29/44 (65%)
Query: 1 MIVPLEQKLDMLWSFIKAHLNS--KILVFLTSCKQVKYVFEAFK 42
++VP + +L L + +++H+ S KI++FL+ V + FEAF+
Sbjct: 390 VVVPPKLRLVSLVALLRSHVRSYKKIIIFLSCSDSVDFHFEAFR 433
>RGD|1304895 [details] [associations]
symbol:Ddx31 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 31"
species:10116 "Rattus norvegicus" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 RGD:1304895
GO:GO:0005524 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
InterPro:IPR025313 Pfam:PF13959 GeneTree:ENSGT00550000075041
EMBL:CH474001 UniGene:Rn.63648 Ensembl:ENSRNOT00000064323
Uniprot:G3V9V8
Length = 682
Score = 216 (81.1 bits), Expect = 1.2e-14, P = 1.2e-14
Identities = 63/185 (34%), Positives = 94/185 (50%)
Query: 17 KAHLNSKILVFLTSCKQVKYVFEAF------------KKLRPGI--PL--MCLYGRMKQD 60
K + K++VF +SC+ V++ + F + P PL + L+G MKQ+
Sbjct: 370 KFEKDQKMIVFFSSCELVEFHYNLFLHTLLCHSGTPASETLPSASWPLKFLRLHGNMKQE 429
Query: 61 RRMAIYAQFCEKRS-VLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYNS 119
R +++ +F + VL CTDVASRGLD + V W+VQ P A YIHR+GRTAR
Sbjct: 430 ERTSVFHEFSHSGTGVLLCTDVASRGLDLPQ-VTWIVQYSAPSAPAEYIHRIGRTARIGC 488
Query: 120 GGRSVLFLTPTEMKMLEKLREAKIPIHFTKANTKRLQPVSGLLAALLVK--YPDMQHRAQ 177
G S+L L P+E + + L KI N ++ + G+LA L + Q AQ
Sbjct: 489 HGSSLLILAPSEAEYVNSLASHKI-------NVSEIK-LEGILAVLAKDDCFKRRQRGAQ 540
Query: 178 KAFIT 182
++ T
Sbjct: 541 RSHAT 545
>ZFIN|ZDB-GENE-050522-359 [details] [associations]
symbol:zgc:112350 "zgc:112350" species:7955 "Danio
rerio" [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
ZFIN:ZDB-GENE-050522-359 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG100512 KO:K14777
EMBL:BC095776 IPI:IPI00488135 RefSeq:NP_001018522.1
UniGene:Dr.84733 ProteinModelPortal:Q502B4 SMR:Q502B4 GeneID:553715
KEGG:dre:553715 NextBio:20880445 Uniprot:Q502B4
Length = 512
Score = 212 (79.7 bits), Expect = 1.9e-14, P = 1.9e-14
Identities = 53/144 (36%), Positives = 80/144 (55%)
Query: 1 MIVPLEQKLDMLWSFIKAHLNSKILVFLTSCKQVKYVFEAFKKLRPGIPLMCLYGRMKQD 60
+ +P + K L S + + +VF +C + V + L GI + L+G+M Q+
Sbjct: 298 IFIPSKYKDCYLVSILNELAGNSFMVFCGTCNNTQRVALLLRNL--GITAIPLHGQMSQN 355
Query: 61 RRMAIYAQFCEK-RSVLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYNS 119
+R+ +F K RSVL TDVASRGLD VD V+ D P YIHRVGRTAR
Sbjct: 356 KRLGALNKFKSKSRSVLLATDVASRGLDIPH-VDCVINFDIPTHSKDYIHRVGRTARAGR 414
Query: 120 GGRSVLFLTPTEMKMLEKLREAKI 143
G+S+ F+T ++++ +++ EA I
Sbjct: 415 SGKSITFVTQYDVELFQRI-EALI 437
>GENEDB_PFALCIPARUM|PF14_0437 [details] [associations]
symbol:PF14_0437 "helicase, truncated,
putative" species:5833 "Plasmodium falciparum" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:AE014187 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
RefSeq:XP_001348611.2 ProteinModelPortal:Q8IL13 IntAct:Q8IL13
MINT:MINT-1661155 PRIDE:Q8IL13 EnsemblProtists:PF14_0437:mRNA
GeneID:812019 KEGG:pfa:PF14_0437 EuPathDB:PlasmoDB:PF3D7_1445900
HOGENOM:HOG000199241 ProtClustDB:PTZ00110 Uniprot:Q8IL13
Length = 527
Score = 212 (79.7 bits), Expect = 2.0e-14, P = 2.0e-14
Identities = 48/130 (36%), Positives = 77/130 (59%)
Query: 21 NSKILVFLTSCKQVKYVFEAFKKLRPGIPLMCLYGRMKQDRRMAIYAQFCEKRS-VLFCT 79
N +I+VF+ + K ++ +A + G+P +C++G KQ+ R + +F +S ++ T
Sbjct: 360 NDRIIVFVETKKNADFITKALRL--DGMPALCIHGDKKQEERRWVLNEFKTGKSPIMIAT 417
Query: 80 DVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYNSGGRSVLFLTPTEMKM---LE 136
DVASRGLD K V +V+ D P + Y+HR+GRT R S G S FLT + ++ L
Sbjct: 418 DVASRGLDI-KNVKYVINFDFPNQIEDYVHRIGRTGRAGSHGASFTFLTADKYRLAKDLV 476
Query: 137 K-LREAKIPI 145
K LRE++ P+
Sbjct: 477 KILRESEQPV 486
>UNIPROTKB|Q8IL13 [details] [associations]
symbol:PF14_0437 "Helicase, putative" species:36329
"Plasmodium falciparum 3D7" [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:AE014187
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 RefSeq:XP_001348611.2
ProteinModelPortal:Q8IL13 IntAct:Q8IL13 MINT:MINT-1661155
PRIDE:Q8IL13 EnsemblProtists:PF14_0437:mRNA GeneID:812019
KEGG:pfa:PF14_0437 EuPathDB:PlasmoDB:PF3D7_1445900
HOGENOM:HOG000199241 ProtClustDB:PTZ00110 Uniprot:Q8IL13
Length = 527
Score = 212 (79.7 bits), Expect = 2.0e-14, P = 2.0e-14
Identities = 48/130 (36%), Positives = 77/130 (59%)
Query: 21 NSKILVFLTSCKQVKYVFEAFKKLRPGIPLMCLYGRMKQDRRMAIYAQFCEKRS-VLFCT 79
N +I+VF+ + K ++ +A + G+P +C++G KQ+ R + +F +S ++ T
Sbjct: 360 NDRIIVFVETKKNADFITKALRL--DGMPALCIHGDKKQEERRWVLNEFKTGKSPIMIAT 417
Query: 80 DVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYNSGGRSVLFLTPTEMKM---LE 136
DVASRGLD K V +V+ D P + Y+HR+GRT R S G S FLT + ++ L
Sbjct: 418 DVASRGLDI-KNVKYVINFDFPNQIEDYVHRIGRTGRAGSHGASFTFLTADKYRLAKDLV 476
Query: 137 K-LREAKIPI 145
K LRE++ P+
Sbjct: 477 KILRESEQPV 486
>UNIPROTKB|F5H5U2 [details] [associations]
symbol:DDX55 "ATP-dependent RNA helicase DDX55"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR011545 Pfam:PF00270 PROSITE:PS00039
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
InterPro:IPR025313 Pfam:PF13959 EMBL:AC055713 EMBL:AC117503
HGNC:HGNC:20085 ChiTaRS:DDX55 IPI:IPI01010332
ProteinModelPortal:F5H5U2 SMR:F5H5U2 Ensembl:ENST00000538744
ArrayExpress:F5H5U2 Bgee:F5H5U2 Uniprot:F5H5U2
Length = 569
Score = 141 (54.7 bits), Expect = 2.8e-14, Sum P(2) = 2.8e-14
Identities = 54/203 (26%), Positives = 90/203 (44%)
Query: 105 ASYIHRVGRTARYNSGGRSVLFLTPTEMKMLEKLR-EAKIPIHFTKA--NTKRLQPVSGL 161
++++HR GRTAR GG +++FL P E + L K P+ K NT L P
Sbjct: 319 SAFVHRCGRTARIGHGGSALVFLLPMEESYINFLAINQKCPLQEMKPQRNTADLLPK--- 375
Query: 162 LAALLVKYPDMQHRAQKAFITYLRSVHIQKDKEVFDVTKLSIDEFSASLGLPMTPKIRFL 221
L ++ + + + KAF++Y+++ + +F + L + L PK+ L
Sbjct: 376 LKSMALADRAVFEKGMKAFVSYVQAYAKHECNLIFRLKDLDFASLARGFALLRMPKMPEL 435
Query: 222 NQKK-GKMVPVKPVLDNAEKEDKLMIS-REKLLPDNFTEENVDRDILETKDIEDEGKADL 279
K+ VPV D +DK+ R+KLL E+ E+EG+
Sbjct: 436 RGKQFPDFVPVDVNTDTIPFKDKIREKQRQKLLEQQRREKT-----------ENEGRRKF 484
Query: 280 LED-VMRATRVKKNKKLKINVHR 301
+++ + KK KK K+N R
Sbjct: 485 IKNKAWSKQKAKKEKKKKMNEKR 507
Score = 119 (46.9 bits), Expect = 2.8e-14, Sum P(2) = 2.8e-14
Identities = 24/74 (32%), Positives = 45/74 (60%)
Query: 1 MIVPLEQKLDMLWSFIKAHLNSKILVFLTSCKQVKYVFEAFKKLRPGIPLMCLYGRMKQD 60
M+ ++K + L F++ H K LVF ++C V+Y +A + L G+ +MC++G+MK
Sbjct: 247 MVCKADEKFNQLVHFLRNHKQEKHLVFFSTCACVEYYGKALEVLVKGVKIMCIHGKMKY- 305
Query: 61 RRMAIYAQFCEKRS 74
+R I+ +F + +S
Sbjct: 306 KRNKIFMEFRKLQS 319
Score = 62 (26.9 bits), Expect = 6.0e-06, Sum P(2) = 6.0e-06
Identities = 16/47 (34%), Positives = 23/47 (48%)
Query: 247 SREKLLPDNFTEENVDRDILETKDIEDEGKADLLEDVMRATRVKKNK 293
S++K + + N R E DIEDE +LL D ++KK K
Sbjct: 491 SKQKAKKEKKKKMNEKRKREEGSDIEDEDMEELLNDTRLLKKLKKGK 537
>SGD|S000002602 [details] [associations]
symbol:MSS116 "DEAD-box protein involved splicing of
mitochondrial introns" species:4932 "Saccharomyces cerevisiae"
[GO:0000373 "Group II intron splicing" evidence=IMP;IDA]
[GO:0003723 "RNA binding" evidence=IEA;IDA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0006417 "regulation of translation" evidence=IEA] [GO:0006397
"mRNA processing" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA;IDA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005759
"mitochondrial matrix" evidence=IEA;IMP] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=IDA] [GO:0000372 "Group I intron
splicing" evidence=IMP] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0034337 "RNA folding" evidence=IMP] [GO:0033592
"RNA strand annealing activity" evidence=IDA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 SGD:S000002602
GO:GO:0005524 GO:GO:0006417 GO:GO:0005759 GO:GO:0006397
EMBL:BK006938 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 EMBL:Z48784 GO:GO:0000373 GO:GO:0000372
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00700000105515 GO:GO:0033592 OrthoDB:EOG437VPN
PIR:S02116 RefSeq:NP_010480.1 PDB:3I5X PDB:3I5Y PDB:3I61 PDB:3I62
PDB:3SQW PDB:3SQX PDB:4DB2 PDB:4DB4 PDBsum:3I5X PDBsum:3I5Y
PDBsum:3I61 PDBsum:3I62 PDBsum:3SQW PDBsum:3SQX PDBsum:4DB2
PDBsum:4DB4 ProteinModelPortal:P15424 SMR:P15424 DIP:DIP-5368N
IntAct:P15424 MINT:MINT-525340 STRING:P15424 PaxDb:P15424
PeptideAtlas:P15424 EnsemblFungi:YDR194C GeneID:851775
KEGG:sce:YDR194C CYGD:YDR194c HOGENOM:HOG000113654 OMA:PEAHENI
EvolutionaryTrace:P15424 NextBio:969573 Genevestigator:P15424
GermOnline:YDR194C GO:GO:0034337 Uniprot:P15424
Length = 664
Score = 212 (79.7 bits), Expect = 3.2e-14, P = 3.2e-14
Identities = 43/124 (34%), Positives = 76/124 (61%)
Query: 21 NSKILVFLTSCKQVKYVFEAFK-KLRPGIPLMCLYGRMKQDRRMAIYAQFCEKRS-VLFC 78
N K ++F + K ++ K + + +P++ +G++ Q++R ++ +F + S +L C
Sbjct: 373 NYKAIIFAPTVKFTSFLCSILKNEFKKDLPILEFHGKITQNKRTSLVKRFKKDESGILVC 432
Query: 79 TDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYNSGGRSVLFLTPTEMKMLEKL 138
TDV +RG+DF V V+Q+ P ++A+YIHR+GRTAR G SVLF+ E+ + +L
Sbjct: 433 TDVGARGMDFPN-VHEVLQIGVPSELANYIHRIGRTARSGKEGSSVLFICKDELPFVREL 491
Query: 139 REAK 142
+AK
Sbjct: 492 EDAK 495
>ASPGD|ASPL0000034540 [details] [associations]
symbol:spb4 species:162425 "Emericella nidulans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0030686 "90S preribosome" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0000027 "ribosomal large
subunit assembly" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005730 EMBL:BN001306 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
InterPro:IPR025313 Pfam:PF13959 EMBL:AACD01000052
HOGENOM:HOG000268803 KO:K14809 OMA:CACVEYW RefSeq:XP_660780.1
ProteinModelPortal:Q5B8F4 STRING:Q5B8F4
EnsemblFungi:CADANIAT00009893 GeneID:2873958 KEGG:ani:AN3176.2
OrthoDB:EOG46MFT3 Uniprot:Q5B8F4
Length = 638
Score = 215 (80.7 bits), Expect = 4.5e-14, Sum P(2) = 4.5e-14
Identities = 86/319 (26%), Positives = 137/319 (42%)
Query: 22 SKILVFLTSCKQVKYVFEAFKK-LRPGIPLMCLYGRMKQDRRMAIYAQFCEKRS--VLFC 78
SK + F+++C V Y+ L L+ L+G+ + R + +F + +L
Sbjct: 296 SKSIFFVSTCSGVDYLSVILPLILGNDFQLIPLHGKHPANVRQKNFNRFVNAHNPAILLT 355
Query: 79 TDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYNSGGRSVLFLTP-TEMKMLEK 137
TDVASRGLD +VD VVQ+D P D ++IHR GR R G SV+ L P E +
Sbjct: 356 TDVASRGLDI-PSVDLVVQIDPPSDPKTFIHRCGRAGRAGRRGLSVVLLHPGREEDYVSF 414
Query: 138 LREAKIPI----H-FTKANTKRLQPVSGLLAALLVKYPDMQH-RAQKAFITYLRSVHIQK 191
L K P+ H T ++ + A +VK H R QKAF+++LRS +
Sbjct: 415 LEVRKTPVAPFPHPITVSDAEAAAATE--TARKVVKADRAIHDRGQKAFVSWLRSYSKHQ 472
Query: 192 DKEVFDVTKLSIDEFSASLGLPMTPKIRFLNQKKG-KMVPVKPVLDNAEKEDKLMISREK 250
+F V L + + GL PK+ L KG K + V+ D +DK R
Sbjct: 473 ASSIFRVADLDWEGLGKAWGLLKLPKMPELKNFKGDKTLGVQMDWDTYAYKDKQREKRRL 532
Query: 251 LLPDNFTEENVDRDILETKDIEDEGKADLLEDVMRATRVKKNKKLKINVHRPLGTRLVFD 310
L E + + + E ++ E+ R + K+ ++ R ++ +
Sbjct: 533 ELLQEMAESGQQQTTNKKRPNETVAWSNNAEN--RNKKAKRRDMKQVRQERKRWEKMTEE 590
Query: 311 EECNTVPPLAMLADTKNAN 329
E+ + ML + N
Sbjct: 591 EKKKALETEQMLEQIRAKN 609
Score = 37 (18.1 bits), Expect = 4.5e-14, Sum P(2) = 4.5e-14
Identities = 8/22 (36%), Positives = 12/22 (54%)
Query: 400 ERGRRKKAKIYFDSDSDNDNDE 421
E+ R K+A D D++ DE
Sbjct: 611 EQRRLKRAAAKADKDAEEGGDE 632
>WB|WBGene00012059 [details] [associations]
symbol:T26G10.1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0040010 "positive regulation of
growth rate" evidence=IMP] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040035 "hermaphrodite genitalia
development" evidence=IMP] [GO:0006915 "apoptotic process"
evidence=IMP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0009792 GO:GO:0040007 GO:GO:0040010 GO:GO:0006915
GO:GO:0002119 GO:GO:0010171 GO:GO:0003723 GO:GO:0040035
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268802 GeneTree:ENSGT00670000098028 KO:K14777
OMA:IFIPSKF EMBL:Z29115 PIR:S40731 RefSeq:NP_499069.1
ProteinModelPortal:P34580 SMR:P34580 STRING:P34580 PaxDb:P34580
EnsemblMetazoa:T26G10.1 GeneID:176321 KEGG:cel:CELE_T26G10.1
UCSC:T26G10.1 CTD:176321 WormBase:T26G10.1 InParanoid:P34580
NextBio:892086 Uniprot:P34580
Length = 489
Score = 202 (76.2 bits), Expect = 2.4e-13, P = 2.4e-13
Identities = 47/144 (32%), Positives = 77/144 (53%)
Query: 1 MIVPLEQKLDMLWSFIKAHLNSKILVFLTSCKQVKYVFEAFKKLRPGIPLMCLYGRMKQD 60
+ VP + K L + H + +VF +C + ++L G+ + L+G+M Q+
Sbjct: 263 IFVPNKYKETYLVYLLNEHAGNSAIVFCATCATTMQIAVMLRQL--GMQAVPLHGQMSQE 320
Query: 61 RRMAIYAQFCEK-RSVLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYNS 119
+R+ +F K R +L CTDVA+RGLD VD V+ D P Y+HRVGRTAR
Sbjct: 321 KRLGSLNKFKSKAREILVCTDVAARGLDIPH-VDMVINYDMPSQSKDYVHRVGRTARAGR 379
Query: 120 GGRSVLFLTPTEMKMLEKLREAKI 143
G ++ +T +++ +K+ EA +
Sbjct: 380 SGIAITVVTQYDVEAYQKI-EANL 402
>ASPGD|ASPL0000028276 [details] [associations]
symbol:AN5623 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:BN001305
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268799
ProteinModelPortal:C8VFX5 EnsemblFungi:CADANIAT00003447 OMA:STIGKMG
Uniprot:C8VFX5
Length = 567
Score = 202 (76.2 bits), Expect = 3.2e-13, P = 3.2e-13
Identities = 57/166 (34%), Positives = 84/166 (50%)
Query: 21 NSKILVFLTSCKQVKYVFEAFKK-LRPGIPLMCLYGRMKQDRRMAIYAQFCEKRS-VLFC 78
N+KI+VF + V AF L P + + ++ R+ Q R +QF E + +LF
Sbjct: 269 NTKIIVFGVTANMVALSHSAFANGLTP-LKVFEIHSRLSQSARTRTTSQFKEADAGILFA 327
Query: 79 TDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYNSGGRSVLFLTPTEMKMLEKL 138
+DV RG+DF VD VVQV P + Y+HRVGRTAR + GR+V+ LT +E L+
Sbjct: 328 SDVIGRGMDFPN-VDLVVQVGLPSNAEQYVHRVGRTARAGNDGRAVILLTESESFFLKAN 386
Query: 139 REAKIPIHFTKANTKRLQPVSGLLAALLVKYPDMQHRAQKAFITYL 184
R I H A++ S A Y + Q+A+ +Y+
Sbjct: 387 RHLPIQPH-PDASSILANATSCSPAVTQAMYAVDETTKQRAYSSYI 431
>SGD|S000001732 [details] [associations]
symbol:DBP7 "Putative ATP-dependent RNA helicase of the
DEAD-box family" species:4932 "Saccharomyces cerevisiae"
[GO:0000463 "maturation of LSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0005730 "nucleolus" evidence=IEA;IDA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 SGD:S000001732
GO:GO:0005524 GO:GO:0005730 EMBL:BK006944 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0000463
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
InterPro:IPR025313 Pfam:PF13959 KO:K14806 HOGENOM:HOG000268799
OMA:RAYATHI OrthoDB:EOG4W6S47 EMBL:Z28249 PIR:S38093
RefSeq:NP_012949.1 ProteinModelPortal:P36120 SMR:P36120
DIP:DIP-1833N IntAct:P36120 MINT:MINT-395227 STRING:P36120
PaxDb:P36120 PeptideAtlas:P36120 EnsemblFungi:YKR024C GeneID:853894
KEGG:sce:YKR024C CYGD:YKR024c GeneTree:ENSGT00550000075041
NextBio:975207 Genevestigator:P36120 GermOnline:YKR024C
Uniprot:P36120
Length = 742
Score = 164 (62.8 bits), Expect = 4.2e-13, Sum P(2) = 4.2e-13
Identities = 45/118 (38%), Positives = 60/118 (50%)
Query: 37 VFEAFKKLR-PGIPLMCLYGRMKQDRRMAIYAQFCE-------KRSVLFCTDVASRGLDF 88
+F F R P + + L+G + Q R + F K ++FCTDVASRGLD
Sbjct: 470 MFPCFSDSRDPDVVIYKLHGSLSQQMRTSTLQHFARDNEATKGKHLIMFCTDVASRGLDL 529
Query: 89 NKAVDWVVQVDCPEDVASYIHRVGRTARYNSGGRSVLFLTPTEMKMLEKLREAKIPIH 146
V V+++D P V ++HRVGRTAR G S+LFL P E EK + P H
Sbjct: 530 PH-VGSVIELDPPFAVEDHLHRVGRTARAGEKGESLLFLLPGEE---EKYMDYIQPYH 583
Score = 86 (35.3 bits), Expect = 4.2e-13, Sum P(2) = 4.2e-13
Identities = 25/84 (29%), Positives = 41/84 (48%)
Query: 176 AQKAFITYLRS--VHIQKDKEVFDVTKLSIDEFSASLGLPMTPKIRFLNQKKGKMVPVKP 233
A K FI+++R+ HI ++K+ F+V L + + S GL PK L K KP
Sbjct: 657 AVKGFISHVRAYATHISQEKKFFNVKFLHLGHLAKSFGLRERPKAMGLQSSKDGNSEKKP 716
Query: 234 VLDNAE-KEDKLMISREKLLPDNF 256
+N++ K ++ EK + F
Sbjct: 717 TKENSKNKMFRMARMAEKQIASEF 740
>ASPGD|ASPL0000042587 [details] [associations]
symbol:AN1750 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005730
"nucleolus" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005730 EMBL:AACD01000027 EMBL:BN001307 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K14805 HOGENOM:HOG000290702 RefSeq:XP_659354.1
ProteinModelPortal:Q5BCI0 STRING:Q5BCI0 PRIDE:Q5BCI0
EnsemblFungi:CADANIAT00008396 GeneID:2875695 KEGG:ani:AN1750.2
OMA:VEEGYFA OrthoDB:EOG44J5S7 Uniprot:Q5BCI0
Length = 770
Score = 202 (76.2 bits), Expect = 5.5e-13, P = 5.5e-13
Identities = 53/162 (32%), Positives = 85/162 (52%)
Query: 4 PLEQKLDMLWSFIKAHLNSKILVFLTSCKQVKYVFEAFKKLRPGIPLMCLYGRMKQDRRM 63
P +K L++ + H + LVF S V+ + + + L+ +P + L+ M Q R+
Sbjct: 482 PAMEKDLYLYTLLLYHPKHRTLVFTNSISAVRRITQLLQTLQ--LPALALHSSMAQKARL 539
Query: 64 AIYAQFCEKRS----VLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYNS 119
+F + +L TDVA+RGLD K +D+V+ P +Y+HR GRTAR +
Sbjct: 540 RSVERFSSSTANPGTILVATDVAARGLDI-KGIDFVIHYHAPRTADTYVHRSGRTARAGA 598
Query: 120 GGRSVLFLTPTEMKMLEKLREAKIPIHFTKANTKRLQPVSGL 161
G+SV+ +P EM + +L AK+ H AN K+L P+ L
Sbjct: 599 SGKSVIICSPEEMVGVVRLA-AKV--HANMANGKKL-PLESL 636
>TAIR|locus:2159517 [details] [associations]
symbol:PDE340 "PIGMENT DEFECTIVE 340" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA;ISS] [GO:0009507 "chloroplast"
evidence=IDA] [GO:0009220 "pyrimidine ribonucleotide biosynthetic
process" evidence=RCA] InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0009507 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268799 EMBL:AB006697 EMBL:AJ010474
IPI:IPI00522710 PIR:T51747 RefSeq:NP_196478.2 UniGene:At.32551
ProteinModelPortal:Q9FNM7 SMR:Q9FNM7 STRING:Q9FNM7 PaxDb:Q9FNM7
PRIDE:Q9FNM7 EnsemblPlants:AT5G08610.1 GeneID:830762
KEGG:ath:AT5G08610 GeneFarm:949 TAIR:At5g08610 InParanoid:Q9FNM7
OMA:GRNDRNV PhylomeDB:Q9FNM7 ProtClustDB:CLSN2918084
Genevestigator:Q9FNM7 GermOnline:AT5G08610 Uniprot:Q9FNM7
Length = 850
Score = 201 (75.8 bits), Expect = 8.2e-13, P = 8.2e-13
Identities = 69/241 (28%), Positives = 121/241 (50%)
Query: 1 MIVPLEQKLDMLWSFIKAHL----NSKILVFLTSCKQVKYVFEAFKKLRPGIPLMCLYGR 56
MI L++ +L +K H+ + K+++F T+ + V + +L + + ++ R
Sbjct: 616 MIASLDRHFSLLHVLLKEHIADNVDYKVIIFCTTAMVTRLVADLLSQL--SLNVREIHSR 673
Query: 57 MKQDRRMAIYAQFCEKRSVLFCT-DVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTA 115
Q R + +F + ++++ T DV++RG+D+ V VVQ+ P D YIHR+GRT
Sbjct: 674 KPQSYRTRVSDEFRKSKAIILVTSDVSARGVDYPD-VSLVVQMGLPSDREQYIHRLGRTG 732
Query: 116 RYNSGGRSVLFLTPTEMKMLEKLREAKIPIHFTKANTKRLQPVSGLLAALLVKYPDMQHR 175
R G VL L P E + +++ +PI TK+ + P + + +M+++
Sbjct: 733 RKGKEGEGVLLLAPWEEYFMSSVKD--LPI--TKSPLPPIDPEAVKRVQKGLSQVEMKNK 788
Query: 176 --AQKAFITYLRSVHIQKDKEVFDVTKLS--IDEFSASLGLPMTPKI-RFLNQKKG-KMV 229
A +A++ Y +S QK D T+L +EFS S+GL P I + + K G K V
Sbjct: 789 EAAYQAWLGYYKS---QK-MIARDTTRLVELANEFSRSMGLDSPPAIPKNVLGKMGLKNV 844
Query: 230 P 230
P
Sbjct: 845 P 845
>MGI|MGI:1915005 [details] [associations]
symbol:Ddx47 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 47"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005730 "nucleolus"
evidence=ISO] [GO:0006364 "rRNA processing" evidence=ISO]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0006915 "apoptotic
process" evidence=ISO] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008380 "RNA splicing" evidence=ISO]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:1915005
GO:GO:0005524 GO:GO:0006915 GO:GO:0005730 GO:GO:0008380
GO:GO:0006397 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268802
GeneTree:ENSGT00670000098028 CTD:51202 HOVERGEN:HBG100512 KO:K14777
OMA:IFIPSKF OrthoDB:EOG4TXBRS ChiTaRS:DDX47 EMBL:AK010310
EMBL:AK076982 IPI:IPI00187240 RefSeq:NP_080636.2 UniGene:Mm.166524
ProteinModelPortal:Q9CWX9 SMR:Q9CWX9 IntAct:Q9CWX9
PhosphoSite:Q9CWX9 PaxDb:Q9CWX9 PRIDE:Q9CWX9
Ensembl:ENSMUST00000032326 GeneID:67755 KEGG:mmu:67755
InParanoid:Q9CWX9 NextBio:325481 Bgee:Q9CWX9 CleanEx:MM_DDX47
Genevestigator:Q9CWX9 GermOnline:ENSMUSG00000030204 Uniprot:Q9CWX9
Length = 455
Score = 196 (74.1 bits), Expect = 9.6e-13, P = 9.6e-13
Identities = 48/153 (31%), Positives = 80/153 (52%)
Query: 1 MIVPLEQKLDMLWSFIKAHLNSKILVFLTSCKQVKYVFEAFKKLRPGIPLMCLYGRMKQD 60
+ +P + K L + + ++F ++C + + L G + L+G+M Q
Sbjct: 243 LFIPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNL--GFTAIPLHGQMSQS 300
Query: 61 RRMAIYAQFCEK-RSVLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYNS 119
+R+ +F K RS+L TDVASRGLD VD VV D P YIHRVGRTAR
Sbjct: 301 KRLGSLNKFKAKARSILLATDVASRGLDIPH-VDVVVNFDIPTHSKDYIHRVGRTARAGR 359
Query: 120 GGRSVLFLTPTEMKMLEKLREA---KIPIHFTK 149
G+++ F+T ++++ +++ K+P+ T+
Sbjct: 360 SGKAITFVTQYDVELFQRIEHLIGKKLPVFPTQ 392
>UNIPROTKB|G3V727 [details] [associations]
symbol:Ddx47 "Protein Ddx47" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0006915 "apoptotic process" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 EMBL:CH473964
GeneTree:ENSGT00670000098028 CTD:51202 KO:K14777 OMA:IFIPSKF
RefSeq:NP_001015005.2 UniGene:Rn.73790 Ensembl:ENSRNOT00000011096
GeneID:297685 KEGG:rno:297685 RGD:1310437 NextBio:642541
Uniprot:G3V727
Length = 455
Score = 196 (74.1 bits), Expect = 9.6e-13, P = 9.6e-13
Identities = 48/153 (31%), Positives = 80/153 (52%)
Query: 1 MIVPLEQKLDMLWSFIKAHLNSKILVFLTSCKQVKYVFEAFKKLRPGIPLMCLYGRMKQD 60
+ +P + K L + + ++F ++C + + L G + L+G+M Q
Sbjct: 243 LFIPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNL--GFTAIPLHGQMSQS 300
Query: 61 RRMAIYAQFCEK-RSVLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYNS 119
+R+ +F K RS+L TDVASRGLD VD VV D P YIHRVGRTAR
Sbjct: 301 KRLGSLNKFKAKARSILLATDVASRGLDIPH-VDVVVNFDIPTHSKDYIHRVGRTARAGR 359
Query: 120 GGRSVLFLTPTEMKMLEKLREA---KIPIHFTK 149
G+++ F+T ++++ +++ K+P+ T+
Sbjct: 360 SGKAITFVTQYDVELFQRIEHLIGKKLPVFPTQ 392
>UNIPROTKB|Q29S22 [details] [associations]
symbol:DDX47 "Probable ATP-dependent RNA helicase DDX47"
species:9913 "Bos taurus" [GO:0005730 "nucleolus" evidence=ISS]
[GO:0008380 "RNA splicing" evidence=ISS] [GO:0006915 "apoptotic
process" evidence=ISS] [GO:0006364 "rRNA processing" evidence=ISS]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0006915 GO:GO:0005730
GO:GO:0008380 GO:GO:0006397 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268802 GeneTree:ENSGT00670000098028 EMBL:BC113207
IPI:IPI00688068 RefSeq:NP_001039850.1 UniGene:Bt.23258
ProteinModelPortal:Q29S22 SMR:Q29S22 PRIDE:Q29S22
Ensembl:ENSBTAT00000003058 GeneID:534721 KEGG:bta:534721 CTD:51202
HOVERGEN:HBG100512 InParanoid:Q29S22 KO:K14777 OMA:IFIPSKF
OrthoDB:EOG4TXBRS NextBio:20876515 Uniprot:Q29S22
Length = 457
Score = 196 (74.1 bits), Expect = 9.7e-13, P = 9.7e-13
Identities = 48/153 (31%), Positives = 80/153 (52%)
Query: 1 MIVPLEQKLDMLWSFIKAHLNSKILVFLTSCKQVKYVFEAFKKLRPGIPLMCLYGRMKQD 60
+ +P + K L + + ++F ++C + + L G + L+G+M Q
Sbjct: 245 LFIPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNL--GFTAIPLHGQMSQS 302
Query: 61 RRMAIYAQFCEK-RSVLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYNS 119
+R+ +F K RS+L TDVASRGLD VD VV D P YIHRVGRTAR
Sbjct: 303 KRLGSLNKFKAKARSILLATDVASRGLDIPH-VDVVVNFDIPTHSKDYIHRVGRTARAGR 361
Query: 120 GGRSVLFLTPTEMKMLEKLREA---KIPIHFTK 149
G+++ F+T ++++ +++ K+P+ T+
Sbjct: 362 SGKAITFVTQYDVELFQRIEHLIGKKLPVFPTQ 394
>UNIPROTKB|E2RN03 [details] [associations]
symbol:DDX47 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0006915 "apoptotic process" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0006915
GO:GO:0005730 GO:GO:0008380 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00670000098028
OMA:IFIPSKF EMBL:AAEX03015248 Ensembl:ENSCAFT00000020996
NextBio:20853120 Uniprot:E2RN03
Length = 482
Score = 196 (74.1 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 48/153 (31%), Positives = 80/153 (52%)
Query: 1 MIVPLEQKLDMLWSFIKAHLNSKILVFLTSCKQVKYVFEAFKKLRPGIPLMCLYGRMKQD 60
+ +P + K L + + ++F ++C + + L G + L+G+M Q
Sbjct: 269 LFIPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNL--GFTAIPLHGQMSQS 326
Query: 61 RRMAIYAQFCEK-RSVLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYNS 119
+R+ +F K RS+L TDVASRGLD VD VV D P YIHRVGRTAR
Sbjct: 327 KRLGSLNKFKAKARSILLATDVASRGLDIPH-VDVVVNFDIPTHSKDYIHRVGRTARAGR 385
Query: 120 GGRSVLFLTPTEMKMLEKLREA---KIPIHFTK 149
G+++ F+T ++++ +++ K+P+ T+
Sbjct: 386 SGKAITFVTQYDVELFQRIEHLIGKKLPVFPTQ 418
>UNIPROTKB|Q5ZLB0 [details] [associations]
symbol:DDX47 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0006915 "apoptotic process" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0006915
GO:GO:0005730 GO:GO:0008380 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268802 GeneTree:ENSGT00670000098028 CTD:51202
HOVERGEN:HBG100512 KO:K14777 OMA:IFIPSKF OrthoDB:EOG4TXBRS
EMBL:AADN02006011 EMBL:AADN02006010 EMBL:AJ719824 IPI:IPI00584081
RefSeq:NP_001007854.1 UniGene:Gga.13941 SMR:Q5ZLB0 STRING:Q5ZLB0
Ensembl:ENSGALT00000019245 GeneID:417959 KEGG:gga:417959
InParanoid:Q5ZLB0 NextBio:20821184 Uniprot:Q5ZLB0
Length = 453
Score = 195 (73.7 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 45/139 (32%), Positives = 75/139 (53%)
Query: 1 MIVPLEQKLDMLWSFIKAHLNSKILVFLTSCKQVKYVFEAFKKLRPGIPLMCLYGRMKQD 60
+ +P + K L + + ++F ++C + + L G + L+G+M Q+
Sbjct: 244 IFIPSKFKDSYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNL--GFTAIPLHGQMSQN 301
Query: 61 RRMAIYAQFCEK-RSVLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYNS 119
+R+ +F K RS+L TDVASRGLD VD V+ D P YIHRVGRTAR
Sbjct: 302 KRLGSLNKFKAKARSILLATDVASRGLDIPH-VDVVINFDIPTHSKDYIHRVGRTARAGR 360
Query: 120 GGRSVLFLTPTEMKMLEKL 138
G+S+ F+T ++++ +++
Sbjct: 361 SGKSITFVTQYDVELFQRI 379
>DICTYBASE|DDB_G0271708 [details] [associations]
symbol:ddx31 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 dictyBase:DDB_G0271708 GO:GO:0005524
GenomeReviews:CM000151_GR GO:GO:0003723 EMBL:AAFI02000006
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
InterPro:IPR025313 Pfam:PF13959 KO:K14806 HSSP:P10081
RefSeq:XP_645498.1 ProteinModelPortal:Q869P0
EnsemblProtists:DDB0234202 GeneID:8618126 KEGG:ddi:DDB_G0271708
OMA:THIQEAS Uniprot:Q869P0
Length = 908
Score = 192 (72.6 bits), Expect = 2.7e-12, Sum P(2) = 2.7e-12
Identities = 40/106 (37%), Positives = 60/106 (56%)
Query: 48 IPLMCLYGRMKQDRRMAIYAQFCEK-RSVLFCTDVASRGLDFNKAVDWVVQVDCPEDVAS 106
+P+ L+G + Q R + F +L TDV++RGLD +V+W+VQ D D
Sbjct: 604 VPIFKLHGELDQQTRTKTFFDFKNSPNGILLTTDVSARGLDL-PSVNWIVQYDPCSDTKD 662
Query: 107 YIHRVGRTARYNSGGRSVLFLTPTEMKMLEKLREAKIPIHFTKANT 152
YIHR+GRTAR + G S+LFL P+E K ++ L + + + K T
Sbjct: 663 YIHRIGRTARLGNQGCSLLFLLPSEKKYIDHLAKFNVSVKEMKVTT 708
Score = 50 (22.7 bits), Expect = 2.7e-12, Sum P(2) = 2.7e-12
Identities = 17/58 (29%), Positives = 27/58 (46%)
Query: 161 LLAALLVKYPDMQHRAQKAFITYLRSVHIQK-D-KEVFDVTKLSIDEFSASLGLPMTP 216
L L+ + A+ A+ ++LRS K D K +F ++ L + S S L TP
Sbjct: 740 LFERFLIYDSKAKEMARCAYQSFLRSYATHKADVKSIFHISYLHLGHVSKSFALRETP 797
>UNIPROTKB|Q9H0S4 [details] [associations]
symbol:DDX47 "Probable ATP-dependent RNA helicase DDX47"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0006915 "apoptotic process" evidence=IDA]
[GO:0008380 "RNA splicing" evidence=IMP] [GO:0006364 "rRNA
processing" evidence=IMP] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0006915 GO:GO:0005730
GO:GO:0008380 GO:GO:0006397 GO:GO:0003676 GO:GO:0003723
EMBL:CH471094 UniGene:Hs.719938 GermOnline:ENSG00000178878
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268802 CTD:51202 HOVERGEN:HBG100512 KO:K14777
OMA:IFIPSKF EMBL:AF078843 EMBL:AL136666 EMBL:AK054574 EMBL:AK127712
EMBL:AC007215 EMBL:BC009379 EMBL:BC068009 IPI:IPI00023972
IPI:IPI00397372 RefSeq:NP_057439.2 RefSeq:NP_957518.1 PDB:3BER
PDBsum:3BER ProteinModelPortal:Q9H0S4 SMR:Q9H0S4 IntAct:Q9H0S4
MINT:MINT-3056694 STRING:Q9H0S4 PhosphoSite:Q9H0S4 DMDM:52782792
SWISS-2DPAGE:Q9H0S4 PaxDb:Q9H0S4 PRIDE:Q9H0S4 DNASU:51202
Ensembl:ENST00000352940 Ensembl:ENST00000358007 GeneID:51202
KEGG:hsa:51202 UCSC:uc001rav.3 GeneCards:GC12P012966
HGNC:HGNC:18682 HPA:HPA014855 neXtProt:NX_Q9H0S4
PharmGKB:PA134918403 InParanoid:Q9H0S4 PhylomeDB:Q9H0S4
ChiTaRS:DDX47 EvolutionaryTrace:Q9H0S4 GenomeRNAi:51202
NextBio:54238 ArrayExpress:Q9H0S4 Bgee:Q9H0S4 CleanEx:HS_DDX47
Genevestigator:Q9H0S4 Uniprot:Q9H0S4
Length = 455
Score = 191 (72.3 bits), Expect = 3.5e-12, P = 3.5e-12
Identities = 45/139 (32%), Positives = 74/139 (53%)
Query: 1 MIVPLEQKLDMLWSFIKAHLNSKILVFLTSCKQVKYVFEAFKKLRPGIPLMCLYGRMKQD 60
+ +P + K L + + ++F ++C + + L G + L+G+M Q
Sbjct: 243 IFIPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNL--GFTAIPLHGQMSQS 300
Query: 61 RRMAIYAQFCEK-RSVLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYNS 119
+R+ +F K RS+L TDVASRGLD VD VV D P YIHRVGRTAR
Sbjct: 301 KRLGSLNKFKAKARSILLATDVASRGLDIPH-VDVVVNFDIPTHSKDYIHRVGRTARAGR 359
Query: 120 GGRSVLFLTPTEMKMLEKL 138
G+++ F+T ++++ +++
Sbjct: 360 SGKAITFVTQYDVELFQRI 378
>DICTYBASE|DDB_G0270396 [details] [associations]
symbol:ddx49 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
dictyBase:DDB_G0270396 GO:GO:0005524 EMBL:AAFI02000005
GenomeReviews:CM000150_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 KO:K14778 OMA:FRNLCAI
RefSeq:XP_646762.1 HSSP:P60842 ProteinModelPortal:Q55BR9
PRIDE:Q55BR9 EnsemblProtists:DDB0234206 GeneID:8617735
KEGG:ddi:DDB_G0270396 ProtClustDB:CLSZ2846935 Uniprot:Q55BR9
Length = 508
Score = 191 (72.3 bits), Expect = 3.7e-12, Sum P(2) = 3.7e-12
Identities = 50/139 (35%), Positives = 71/139 (51%)
Query: 3 VPLEQKLDMLWSFIKAHLNSKILVFLTSCKQVKYVFEAFKKLRPGIPLMCLYGRMKQDRR 62
+P K L +K H S +VF+ +C V+ V KL IP + L+ + Q R
Sbjct: 227 MPAPTKDCYLVYILKKHEGSSAIVFVNNCYAVEAVKGMLNKL--DIPSVSLHSFLDQKSR 284
Query: 63 MAIYAQFCE-KRSVLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYNSGG 121
+A F K VL TDVASRGLD V V+ YIHRVGRTAR+ G
Sbjct: 285 LAALKTFKSGKVKVLVATDVASRGLDIPD-VQIVINYKLSNSSKDYIHRVGRTARFGRSG 343
Query: 122 RSVLFLTPTEMKMLEKLRE 140
R++ F+TP ++ +++ + E
Sbjct: 344 RAISFITPHDVSLIKGIEE 362
Score = 42 (19.8 bits), Expect = 3.7e-12, Sum P(2) = 3.7e-12
Identities = 9/31 (29%), Positives = 17/31 (54%)
Query: 406 KAKIYFDSDSDNDNDERKQNKDDNGPNIDSI 436
K K +++ +N+N++ K K +N I I
Sbjct: 425 KEKFENNNNDNNNNNKTKTTKPENKKEITKI 455
>TAIR|locus:2032910 [details] [associations]
symbol:RH36 "RNA helicase 36" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA;ISS]
[GO:0006364 "rRNA processing" evidence=IMP] [GO:0009553 "embryo sac
development" evidence=IMP] [GO:0009791 "post-embryonic development"
evidence=IMP] [GO:0090406 "pollen tube" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0009561 "megagametogenesis"
evidence=IMP] [GO:0006606 "protein import into nucleus"
evidence=RCA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0005634 GO:GO:0003676
GO:GO:0009791 GO:GO:0009561 EMBL:AC006341 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K14778
HOGENOM:HOG000268802 OMA:EVRTVEQ GO:GO:0090406 IPI:IPI00521131
PIR:G86297 RefSeq:NP_173078.1 UniGene:At.51634
ProteinModelPortal:Q9SA27 SMR:Q9SA27 PaxDb:Q9SA27 PRIDE:Q9SA27
EnsemblPlants:AT1G16280.1 GeneID:838197 KEGG:ath:AT1G16280
KEGG:dosa:Os07t0633500-00 GeneFarm:1012 TAIR:At1g16280
InParanoid:Q9SA27 PhylomeDB:Q9SA27 ProtClustDB:CLSN2679781
Genevestigator:Q9SA27 GermOnline:AT1G16280 Uniprot:Q9SA27
Length = 491
Score = 184 (69.8 bits), Expect = 3.9e-12, Sum P(2) = 3.9e-12
Identities = 40/117 (34%), Positives = 67/117 (57%)
Query: 25 LVFLTSCKQVKYVFEAFKKLRPGIPLMCLYGRMKQDRRMAIYAQFCE-KRSVLFCTDVAS 83
++F+++C+ + + +L + + ++ Q R++ ++F K +L TDVAS
Sbjct: 306 MIFVSTCRTCQRLSLMLDELE--VENIAMHSLNSQSMRLSALSKFKSGKVPILLATDVAS 363
Query: 84 RGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYNSGGRSVLFLTPTEMKMLEKLRE 140
RGLD VD V+ D P D Y+HRVGRTAR GG +V +T T++K++ K+ E
Sbjct: 364 RGLDI-PTVDLVINYDIPRDPRDYVHRVGRTARAGRGGLAVSIITETDVKLIHKIEE 419
Score = 49 (22.3 bits), Expect = 3.9e-12, Sum P(2) = 3.9e-12
Identities = 19/64 (29%), Positives = 33/64 (51%)
Query: 218 IRFLNQKKGK-MVPV--KPVLDNAE--KEDKLM-ISREKLLPDNFTEENVDRDILETKDI 271
I + ++ GK M P K + D+ E K K ++ K+L + F ++ DR L+ K +
Sbjct: 414 IHKIEEEVGKKMEPYNKKVITDSLEVTKVSKAKRVAMMKMLDNGFEDKVKDRRKLKRKTL 473
Query: 272 EDEG 275
D+G
Sbjct: 474 ADKG 477
>UNIPROTKB|Q81JK1 [details] [associations]
symbol:BAS5307 "ATP-dependent RNA helicase, DEAD/DEAH box
family" species:1392 "Bacillus anthracis" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 HOGENOM:HOG000268809
InterPro:IPR005580 Pfam:PF03880 OMA:ENRFLEE RefSeq:NP_847849.1
RefSeq:YP_022388.1 RefSeq:YP_031544.1 ProteinModelPortal:Q81JK1
SMR:Q81JK1 IntAct:Q81JK1 DNASU:1085452
EnsemblBacteria:EBBACT00000008202 EnsemblBacteria:EBBACT00000014623
EnsemblBacteria:EBBACT00000021322 GeneID:1085452 GeneID:2819774
GeneID:2852974 KEGG:ban:BA_5703 KEGG:bar:GBAA_5703 KEGG:bat:BAS5307
ProtClustDB:CLSK883265 BioCyc:BANT260799:GJAJ-5380-MONOMER
BioCyc:BANT261594:GJ7F-5556-MONOMER Uniprot:Q81JK1
Length = 481
Score = 187 (70.9 bits), Expect = 4.2e-12, Sum P(2) = 4.2e-12
Identities = 47/154 (30%), Positives = 78/154 (50%)
Query: 6 EQKLDMLWSFIKAHLNSKILVFLTSCKQVKYVFEAFKKLRPGIPLMCLYGRMKQDRRMAI 65
E+KL +L ++F + + V +V+ ++ P ++G M Q+ R +
Sbjct: 227 EEKLSLLKDVTTIENPDSCIIFCRTQENVDHVYRQLDRVN--YPCDKIHGGMVQEDRFGV 284
Query: 66 YAQFCE-KRSVLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYNSGGRSV 124
F + K L TDVA+RG+D + + V+ D P + SY+HR GRT R + G+++
Sbjct: 285 MDDFRKGKFRYLVATDVAARGIDIDN-ITHVINYDIPLEKESYVHRTGRTGRAGNSGKAI 343
Query: 125 LFLTPTEMKMLEKLREAKIPIHFTKANTKRLQPV 158
F+TP E + LE++ EA I KAN + V
Sbjct: 344 TFITPYEDRFLEEI-EAYIGFAIPKANAPSKEEV 376
Score = 45 (20.9 bits), Expect = 4.2e-12, Sum P(2) = 4.2e-12
Identities = 11/24 (45%), Positives = 16/24 (66%)
Query: 275 GKADLLEDVMRATRVKKNKKLKIN 298
GK L+ VMR T +K K+LK++
Sbjct: 455 GKGPLVLKVMRNTTIK-GKQLKVH 477
Score = 41 (19.5 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 9/25 (36%), Positives = 13/25 (52%)
Query: 274 EGKADLLEDVMRATRVKKNKKLKIN 298
+GKA E + +KK+K IN
Sbjct: 378 KGKAAFEEKIQAKPTIKKDKSADIN 402
>TIGR_CMR|BA_5703 [details] [associations]
symbol:BA_5703 "ATP-dependent RNA helicase, DEAD/DEAH box
family" species:198094 "Bacillus anthracis str. Ames" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 HOGENOM:HOG000268809
InterPro:IPR005580 Pfam:PF03880 OMA:ENRFLEE RefSeq:NP_847849.1
RefSeq:YP_022388.1 RefSeq:YP_031544.1 ProteinModelPortal:Q81JK1
SMR:Q81JK1 IntAct:Q81JK1 DNASU:1085452
EnsemblBacteria:EBBACT00000008202 EnsemblBacteria:EBBACT00000014623
EnsemblBacteria:EBBACT00000021322 GeneID:1085452 GeneID:2819774
GeneID:2852974 KEGG:ban:BA_5703 KEGG:bar:GBAA_5703 KEGG:bat:BAS5307
ProtClustDB:CLSK883265 BioCyc:BANT260799:GJAJ-5380-MONOMER
BioCyc:BANT261594:GJ7F-5556-MONOMER Uniprot:Q81JK1
Length = 481
Score = 187 (70.9 bits), Expect = 4.2e-12, Sum P(2) = 4.2e-12
Identities = 47/154 (30%), Positives = 78/154 (50%)
Query: 6 EQKLDMLWSFIKAHLNSKILVFLTSCKQVKYVFEAFKKLRPGIPLMCLYGRMKQDRRMAI 65
E+KL +L ++F + + V +V+ ++ P ++G M Q+ R +
Sbjct: 227 EEKLSLLKDVTTIENPDSCIIFCRTQENVDHVYRQLDRVN--YPCDKIHGGMVQEDRFGV 284
Query: 66 YAQFCE-KRSVLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYNSGGRSV 124
F + K L TDVA+RG+D + + V+ D P + SY+HR GRT R + G+++
Sbjct: 285 MDDFRKGKFRYLVATDVAARGIDIDN-ITHVINYDIPLEKESYVHRTGRTGRAGNSGKAI 343
Query: 125 LFLTPTEMKMLEKLREAKIPIHFTKANTKRLQPV 158
F+TP E + LE++ EA I KAN + V
Sbjct: 344 TFITPYEDRFLEEI-EAYIGFAIPKANAPSKEEV 376
Score = 45 (20.9 bits), Expect = 4.2e-12, Sum P(2) = 4.2e-12
Identities = 11/24 (45%), Positives = 16/24 (66%)
Query: 275 GKADLLEDVMRATRVKKNKKLKIN 298
GK L+ VMR T +K K+LK++
Sbjct: 455 GKGPLVLKVMRNTTIK-GKQLKVH 477
Score = 41 (19.5 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 9/25 (36%), Positives = 13/25 (52%)
Query: 274 EGKADLLEDVMRATRVKKNKKLKIN 298
+GKA E + +KK+K IN
Sbjct: 378 KGKAAFEEKIQAKPTIKKDKSADIN 402
>TAIR|locus:2054688 [details] [associations]
symbol:AT2G07750 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268799 EMBL:AC004483 IPI:IPI00546939 PIR:E84488
RefSeq:NP_178818.1 UniGene:At.52694 ProteinModelPortal:O80792
SMR:O80792 PaxDb:O80792 PRIDE:O80792 EnsemblPlants:AT2G07750.1
GeneID:815422 KEGG:ath:AT2G07750 GeneFarm:994 TAIR:At2g07750
InParanoid:O80792 OMA:FRKTALK PhylomeDB:O80792
ProtClustDB:CLSN2713541 Genevestigator:O80792 GermOnline:AT2G07750
Uniprot:O80792
Length = 845
Score = 193 (73.0 bits), Expect = 6.3e-12, P = 6.3e-12
Identities = 56/224 (25%), Positives = 113/224 (50%)
Query: 1 MIVPLEQKLDMLWSFIKAHLNS----KILVFLTSCKQVKYVFEAFKKLRPGIPLMCLYGR 56
++ P E ++ +K H+N+ KI+VF ++ ++ ++++ + + ++ R
Sbjct: 610 IVAPHESHFHLVPHLLKEHINNMPDYKIIVFCSTGMVTSLMYTLLREMK--LNVREIHAR 667
Query: 57 MKQDRRMAIYAQFCEK-RSVLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTA 115
Q R + +F E R +L +DV++RG+++ V V+QV P D YIHR+GRT
Sbjct: 668 KPQLHRTCVSDEFKESNRLILVTSDVSARGMNYPD-VTLVIQVGIPSDREQYIHRLGRTG 726
Query: 116 RYNSGGRSVLFLTPTEMKMLEKLREAKI-PIHFTKANTKRLQPVSGLLAALLVKYPDMQH 174
R GG+ +L + P E L++L++ + PI +++ V +A + ++
Sbjct: 727 REGKGGKGLLLIAPWERYFLDELKDLPLEPIPAPDLDSRVKHQVDQSMAKIDTS---IKE 783
Query: 175 RAQKAFITYLRSVHIQKDKEVFDVTKLSIDEFSASLGLPMTPKI 218
A A++ Y SV + ++ + +L+ + F S+GL P +
Sbjct: 784 AAYHAWLGYYNSVR-ETGRDKTTLAELA-NRFCHSIGLEKPPAL 825
>FB|FBgn0032919 [details] [associations]
symbol:CG9253 species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081
EMBL:AY121677 ProteinModelPortal:Q8MRB7 SMR:Q8MRB7 STRING:Q8MRB7
PaxDb:Q8MRB7 PRIDE:Q8MRB7 FlyBase:FBgn0032919 InParanoid:Q8MRB7
OrthoDB:EOG4V41Q7 ArrayExpress:Q8MRB7 Bgee:Q8MRB7 Uniprot:Q8MRB7
Length = 507
Score = 188 (71.2 bits), Expect = 9.7e-12, P = 9.7e-12
Identities = 44/139 (31%), Positives = 76/139 (54%)
Query: 1 MIVPLEQKLDMLWSFIKAHLNSKILVFLTSCKQVKYVFEAFKKLRPGIPLMCLYGRMKQD 60
+ +P++ K L + + ++F ++C + L G+ + L+G+M Q+
Sbjct: 280 LFIPVKYKDVYLVHILNELAGNSFMIFCSTCNNTVKTALMLRAL--GLAAIPLHGQMSQN 337
Query: 61 RRMAIYAQFCEK-RSVLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYNS 119
+R+A +F K RS+L TDVASRGLD VD VV D P YIHRVGRTAR
Sbjct: 338 KRLAALNKFKAKNRSILISTDVASRGLDIPH-VDVVVNFDIPTHSKDYIHRVGRTARAGR 396
Query: 120 GGRSVLFLTPTEMKMLEKL 138
G+++ ++ ++++ +++
Sbjct: 397 SGKAITLVSQYDIELYQRI 415
>CGD|CAL0000625 [details] [associations]
symbol:SPB4 species:5476 "Candida albicans" [GO:0030686 "90S
preribosome" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0000027 "ribosomal large subunit assembly" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005730 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313
Pfam:PF13959 KO:K14809 EMBL:AACQ01000202 EMBL:AACQ01000200
RefSeq:XP_711358.1 RefSeq:XP_711406.1 ProteinModelPortal:Q59NP8
STRING:Q59NP8 GeneID:3647008 GeneID:3647042 KEGG:cal:CaO19.11631
KEGG:cal:CaO19.4154 CGD:CAL0005749 Uniprot:Q59NP8
Length = 631
Score = 189 (71.6 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 77/323 (23%), Positives = 144/323 (44%)
Query: 1 MIVPLEQKLDMLWSFIKAHLNSKILVFLTSCKQVKYVFEAFKKL----RPGIPL--MCLY 54
MI P E K+ L + + + K +V+ +C VK+ ++ F K+ PL L+
Sbjct: 259 MINP-ELKITTLLTILSKYQYKKAIVYFPTCTSVKHFYQIFNKVYQQESSDEPLKFFSLH 317
Query: 55 GRMKQDRRMAIYAQFCEK-----RSVLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIH 109
G++ R+ F + + +L TDVA+RG+D VD V+Q+D P D ++H
Sbjct: 318 GQLNTKSRLKTLDNFTQGDINLYKHILMTTDVAARGIDIPD-VDLVIQIDPPTDPNVFLH 376
Query: 110 RVGRTARYNSGGRSVLFLTPT-EMKMLEKLREAKIPIHFTKANTKRLQPVSGLLAALLVK 168
R GRT R N GR+++ L + + E K I TK + L +K
Sbjct: 377 RCGRTGRANKVGRAIVMLNDNCQEEDYIGFMEVK-GIFLTKQDIPTSSATKNLHENFQIK 435
Query: 169 YPD--MQHRAQ-----KAFITYLR--SVHIQKDK-EVFDVTKLSIDEFSASLGLPMTPKI 218
++ RA+ K+++ ++R S HI + + L I + L LP P+
Sbjct: 436 LRQYMLEDRARHELAVKSYVGFIRYYSKHIASSIFRLATLDYLGIAKMYGLLRLPKMPET 495
Query: 219 RFLNQKKGKMVPVKPVLDNAEKEDKLMIS---REKLLPDNFTEENVDR--DILETKDIED 273
++++ ++P L DK + +EK+ +N + + + D K+++
Sbjct: 496 KYIDNS---IMPTDGWLGEIIDMDKYSYADKLQEKIRLENLENDKLKKIQDAKRRKELKI 552
Query: 274 EGKADLLEDVMRATRVKKNKKLK 296
+ +A + + ++ + +KLK
Sbjct: 553 KNEAWSSKSERKENKLDRKEKLK 575
Score = 43 (20.2 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 11/26 (42%), Positives = 17/26 (65%)
Query: 403 RRKKAKIYFDSDSDNDNDERKQNKDD 428
RRK+ KI +++ + ERK+NK D
Sbjct: 546 RRKELKI--KNEAWSSKSERKENKLD 569
>UNIPROTKB|E1C2R8 [details] [associations]
symbol:DDX17 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0009791 "post-embryonic
development" evidence=IEA] [GO:0072358 "cardiovascular system
development" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00660000095174
OMA:QQFPQPP EMBL:AADN02006148 EMBL:AADN02006147 IPI:IPI00594176
Ensembl:ENSGALT00000020002 Uniprot:E1C2R8
Length = 496
Score = 187 (70.9 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 45/134 (33%), Positives = 68/134 (50%)
Query: 6 EQKLDMLWSFIKAHLNSKILVFLTSCKQVKYVFEAFKKLRPGIPLMCLYGRMKQDRRMAI 65
+ KL L I A +K ++F+ + ++ + + R G P MC++G Q R +
Sbjct: 322 DHKLIQLMEEIMAEKENKTIIFVETKRRCDDLTRRMR--RDGWPAMCIHGDKSQPERDWV 379
Query: 66 YAQFCE-KRSVLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYNSGGRSV 124
+F K +L TDVASRGLD V +V+ D P Y+HR+GRTAR + G +
Sbjct: 380 LNEFRSGKAPILIATDVASRGLDVED-VKFVINYDYPNSSEDYVHRIGRTARSTNKGTAY 438
Query: 125 LFLTPTEMKMLEKL 138
F TP +K +L
Sbjct: 439 TFFTPGNLKQAREL 452
>UNIPROTKB|C9JMU5 [details] [associations]
symbol:DDX17 "Probable ATP-dependent RNA helicase DDX17"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268804 EMBL:Z97056 IPI:IPI01022339
HGNC:HGNC:2740 ChiTaRS:DDX17 ProteinModelPortal:C9JMU5 SMR:C9JMU5
STRING:C9JMU5 PRIDE:C9JMU5 Ensembl:ENST00000381633
ArrayExpress:C9JMU5 Bgee:C9JMU5 Uniprot:C9JMU5
Length = 652
Score = 188 (71.2 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 45/135 (33%), Positives = 70/135 (51%)
Query: 6 EQKLDMLWSFIKAHLNSKILVFLTSCKQVKYVFEAFKKLRPGIPLMCLYGRMKQDRRMAI 65
+ KL L I A +K ++F+ + ++ + + R G P MC++G Q R +
Sbjct: 324 DHKLIQLMEEIMAEKENKTIIFVETKRRCDDLTRRMR--RDGWPAMCIHGDKSQPERDWV 381
Query: 66 YAQFCE-KRSVLFCTDVASRGLDFN-KAVDWVVQVDCPEDVASYIHRVGRTARYNSGGRS 123
+F K +L TDVASRGL F+ + V +V+ D P Y+HR+GRTAR + G +
Sbjct: 382 LNEFRSGKAPILIATDVASRGLGFDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTA 441
Query: 124 VLFLTPTEMKMLEKL 138
F TP +K +L
Sbjct: 442 YTFFTPGNLKQAREL 456
>ZFIN|ZDB-GENE-030131-18 [details] [associations]
symbol:si:dkey-156n14.5 "si:dkey-156n14.5"
species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-030131-18 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00660000095174
KO:K13178 EMBL:CR626864 IPI:IPI00896916 RefSeq:XP_001923830.1
UniGene:Dr.75535 Ensembl:ENSDART00000129202 GeneID:556764
KEGG:dre:556764 NextBio:20881652 ArrayExpress:F1QBS1 Bgee:F1QBS1
Uniprot:F1QBS1
Length = 671
Score = 188 (71.2 bits), Expect = 1.6e-11, P = 1.6e-11
Identities = 45/134 (33%), Positives = 67/134 (50%)
Query: 6 EQKLDMLWSFIKAHLNSKILVFLTSCKQVKYVFEAFKKLRPGIPLMCLYGRMKQDRRMAI 65
+ KL L I A +K ++F+ + K+ + + R G P MC++G Q R +
Sbjct: 327 DNKLIQLMEEIMAEKENKTIIFVETKKRCDELTRRMR--RDGWPAMCIHGDKSQPERDWV 384
Query: 66 YAQFCE-KRSVLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYNSGGRSV 124
+F K +L TDVASRGLD V +V+ D P Y+HR+GRTAR + G +
Sbjct: 385 LTEFRSGKAPILIATDVASRGLDVED-VKFVINYDYPNSSEDYVHRIGRTARSTNKGTAY 443
Query: 125 LFLTPTEMKMLEKL 138
F TP ++ L
Sbjct: 444 TFFTPGNLRQARDL 457
>WB|WBGene00019219 [details] [associations]
symbol:H20J04.4 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0002009 "morphogenesis of an epithelium"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0002009 GO:GO:0040010
GO:GO:0003676 GO:GO:0040035 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K14778 HOGENOM:HOG000268802
GeneTree:ENSGT00670000098028 OMA:CQLLSMT EMBL:FO080156
RefSeq:NP_001040789.1 ProteinModelPortal:Q2WF63 SMR:Q2WF63
PaxDb:Q2WF63 EnsemblMetazoa:H20J04.4b GeneID:186756
KEGG:cel:CELE_H20J04.4 UCSC:H20J04.4a CTD:186756 WormBase:H20J04.4b
InParanoid:Q2WF63 NextBio:932876 ArrayExpress:Q2WF63 Uniprot:Q2WF63
Length = 561
Score = 185 (70.2 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
Identities = 51/144 (35%), Positives = 82/144 (56%)
Query: 22 SKILVFLTSCKQVKYVFEAFKKLRPGIPLMCLYGRMKQDRRMAIYAQFCEKR-SVLFCTD 80
S +++F +C++ + + F+ L G + L+ ++ Q +R+A + F K V+ CTD
Sbjct: 338 SSVMIFAQTCRECQALAYMFEGL--GFRVGSLHSQIPQKQRLAALSAFRSKTLQVIICTD 395
Query: 81 VASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYNSGGRSVLFLTPTEMKMLE---- 136
VASRGLD VD VV + P+ +YIHRVGR+AR G ++ F+T ++++L+
Sbjct: 396 VASRGLDIPH-VDLVVNHNVPQCPKTYIHRVGRSARAGRFGSALSFVTQYDVELLQAVEQ 454
Query: 137 ----KLREAKI-PIHFTKANTKRL 155
KL E K+ P H TK T+ L
Sbjct: 455 VIGKKLDELKVSPKHVTKYVTQVL 478
Score = 44 (20.5 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
Identities = 17/57 (29%), Positives = 28/57 (49%)
Query: 238 AEKEDKLMISREKLLPDNFTEENVDRDILETKDIEDEGKADLLEDVMRATRVKKNKK 294
A+KE +L + +K E N +++L + EDE L E MR R+ +K+
Sbjct: 480 AKKEAELKLENQKF--GEKKEINRRKELLMSGMDEDEADRHLEE--MRTRRMTNSKR 532
Score = 43 (20.2 bits), Expect = 2.1e-11, Sum P(2) = 2.1e-11
Identities = 12/36 (33%), Positives = 19/36 (52%)
Query: 235 LDNAEKEDKLMISREK-LLPDNFTEENVDRDILETK 269
L+N + +K I+R K LL E+ DR + E +
Sbjct: 488 LENQKFGEKKEINRRKELLMSGMDEDEADRHLEEMR 523
>UNIPROTKB|A7E307 [details] [associations]
symbol:DDX17 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0072358 "cardiovascular system development"
evidence=IEA] [GO:0009791 "post-embryonic development"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0009791 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268804 GeneTree:ENSGT00660000095174
CTD:10521 HOVERGEN:HBG015893 KO:K13178 OrthoDB:EOG4QRH3N
GO:GO:0072358 EMBL:DAAA02014661 EMBL:DAAA02014662 EMBL:BC151648
IPI:IPI00914517 RefSeq:NP_001095463.1 UniGene:Bt.91623
Ensembl:ENSBTAT00000037682 GeneID:514323 KEGG:bta:514323
InParanoid:A7E307 OMA:QQFPQPP NextBio:20871275 Uniprot:A7E307
Length = 650
Score = 187 (70.9 bits), Expect = 2.0e-11, P = 2.0e-11
Identities = 45/134 (33%), Positives = 68/134 (50%)
Query: 6 EQKLDMLWSFIKAHLNSKILVFLTSCKQVKYVFEAFKKLRPGIPLMCLYGRMKQDRRMAI 65
+ KL L I A +K ++F+ + ++ + + R G P MC++G Q R +
Sbjct: 324 DHKLIQLMEEIMAEKENKTIIFVETKRRCDDLTRRMR--RDGWPAMCIHGDKSQPERDWV 381
Query: 66 YAQFCE-KRSVLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYNSGGRSV 124
+F K +L TDVASRGLD V +V+ D P Y+HR+GRTAR + G +
Sbjct: 382 LNEFRSGKAPILIATDVASRGLDVED-VKFVINYDYPNSSEDYVHRIGRTARSTNKGTAY 440
Query: 125 LFLTPTEMKMLEKL 138
F TP +K +L
Sbjct: 441 TFFTPGNLKQAREL 454
>UNIPROTKB|E2RJ60 [details] [associations]
symbol:DDX17 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095174 EMBL:AAEX03007314
Ensembl:ENSCAFT00000037931 Uniprot:E2RJ60
Length = 650
Score = 187 (70.9 bits), Expect = 2.0e-11, P = 2.0e-11
Identities = 45/134 (33%), Positives = 68/134 (50%)
Query: 6 EQKLDMLWSFIKAHLNSKILVFLTSCKQVKYVFEAFKKLRPGIPLMCLYGRMKQDRRMAI 65
+ KL L I A +K ++F+ + ++ + + R G P MC++G Q R +
Sbjct: 324 DHKLIQLMEEIMAEKENKTIIFVETKRRCDDLTRRMR--RDGWPAMCIHGDKSQPERDWV 381
Query: 66 YAQFCE-KRSVLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYNSGGRSV 124
+F K +L TDVASRGLD V +V+ D P Y+HR+GRTAR + G +
Sbjct: 382 LNEFRSGKAPILIATDVASRGLDVED-VKFVINYDYPNSSEDYVHRIGRTARSTNKGTAY 440
Query: 125 LFLTPTEMKMLEKL 138
F TP +K +L
Sbjct: 441 TFFTPGNLKQAREL 454
>MGI|MGI:1914290 [details] [associations]
symbol:Ddx17 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 17"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003713 "transcription coactivator activity" evidence=ISO]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0009791
"post-embryonic development" evidence=IMP] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0030331 "estrogen receptor binding"
evidence=ISO] [GO:0033148 "positive regulation of intracellular
estrogen receptor signaling pathway" evidence=ISO] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=ISO] [GO:0072358 "cardiovascular system
development" evidence=IMP] [GO:2001014 "regulation of skeletal
muscle cell differentiation" evidence=ISO] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:1914290
GO:GO:0005524 GO:GO:0005634 GO:GO:0005730 GO:GO:0045944
GO:GO:0006351 GO:GO:0003723 GO:GO:0003713 GO:GO:0009791
GO:GO:0033148 GO:GO:0030331 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 CTD:10521 HOVERGEN:HBG015893 KO:K13178
ChiTaRS:DDX17 GO:GO:2001014 EMBL:AK039888 EMBL:BC062910
EMBL:BC096036 IPI:IPI00396797 IPI:IPI00405364 RefSeq:NP_001035277.1
RefSeq:NP_951061.1 RefSeq:NP_951062.1 UniGene:Mm.29644
UniGene:Mm.298199 ProteinModelPortal:Q501J6 SMR:Q501J6
IntAct:Q501J6 STRING:Q501J6 PhosphoSite:Q501J6
REPRODUCTION-2DPAGE:IPI00405364 PaxDb:Q501J6 PRIDE:Q501J6
GeneID:67040 KEGG:mmu:67040 UCSC:uc007wtq.1 UCSC:uc007wtt.1
InParanoid:Q501J6 OrthoDB:EOG4QRH3N NextBio:323386 Bgee:Q501J6
CleanEx:MM_DDX17 Genevestigator:Q501J6
GermOnline:ENSMUSG00000055065 GO:GO:0072358 Uniprot:Q501J6
Length = 650
Score = 187 (70.9 bits), Expect = 2.0e-11, P = 2.0e-11
Identities = 45/134 (33%), Positives = 68/134 (50%)
Query: 6 EQKLDMLWSFIKAHLNSKILVFLTSCKQVKYVFEAFKKLRPGIPLMCLYGRMKQDRRMAI 65
+ KL L I A +K ++F+ + ++ + + R G P MC++G Q R +
Sbjct: 324 DHKLIQLMEEIMAEKENKTIIFVETKRRCDDLTRRMR--RDGWPAMCIHGDKSQPERDWV 381
Query: 66 YAQFCE-KRSVLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYNSGGRSV 124
+F K +L TDVASRGLD V +V+ D P Y+HR+GRTAR + G +
Sbjct: 382 LNEFRSGKAPILIATDVASRGLDVED-VKFVINYDYPNSSEDYVHRIGRTARSTNKGTAY 440
Query: 125 LFLTPTEMKMLEKL 138
F TP +K +L
Sbjct: 441 TFFTPGNLKQAREL 454
>UNIPROTKB|E9PT29 [details] [associations]
symbol:Ddx17 "Protein Ddx17" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0009791 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095174 GO:GO:0072358 IPI:IPI00858352
PRIDE:E9PT29 Ensembl:ENSRNOT00000018185 Uniprot:E9PT29
Length = 651
Score = 187 (70.9 bits), Expect = 2.0e-11, P = 2.0e-11
Identities = 45/134 (33%), Positives = 68/134 (50%)
Query: 6 EQKLDMLWSFIKAHLNSKILVFLTSCKQVKYVFEAFKKLRPGIPLMCLYGRMKQDRRMAI 65
+ KL L I A +K ++F+ + ++ + + R G P MC++G Q R +
Sbjct: 323 DHKLIQLMEEIMAEKENKTIIFVETKRRCDDLTRRMR--RDGWPAMCIHGDKSQPERDWV 380
Query: 66 YAQFCE-KRSVLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYNSGGRSV 124
+F K +L TDVASRGLD V +V+ D P Y+HR+GRTAR + G +
Sbjct: 381 LNEFRSGKAPILIATDVASRGLDVED-VKFVINYDYPNSSEDYVHRIGRTARSTNKGTAY 439
Query: 125 LFLTPTEMKMLEKL 138
F TP +K +L
Sbjct: 440 TFFTPGNLKQAREL 453
>UNIPROTKB|Q92841 [details] [associations]
symbol:DDX17 "Probable ATP-dependent RNA helicase DDX17"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0003713 "transcription coactivator activity" evidence=IDA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0033148 "positive
regulation of intracellular estrogen receptor signaling pathway"
evidence=IDA] [GO:0030331 "estrogen receptor binding" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:2001014 "regulation of
skeletal muscle cell differentiation" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] [GO:0003724 "RNA helicase activity"
evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
[GO:0008186 "RNA-dependent ATPase activity" evidence=TAS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0005730
EMBL:CH471095 GO:GO:0045944 GO:GO:0006351 GO:GO:0003723
GO:GO:0006396 GO:GO:0003713 GO:GO:0033148 GO:GO:0030331
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 GO:GO:0008186 EMBL:U59321 EMBL:CR456432
EMBL:AL713763 EMBL:Z97056 EMBL:BC000595 IPI:IPI00651653
IPI:IPI00651677 IPI:IPI00889541 IPI:IPI01022339 PIR:S72367
RefSeq:NP_006377.2 UniGene:Hs.706116 UniGene:Hs.725500
ProteinModelPortal:Q92841 SMR:Q92841 DIP:DIP-29843N IntAct:Q92841
MINT:MINT-4545892 STRING:Q92841 PhosphoSite:Q92841 DMDM:3122595
REPRODUCTION-2DPAGE:IPI00023785 PaxDb:Q92841 PRIDE:Q92841
DNASU:10521 Ensembl:ENST00000403230 GeneID:10521 KEGG:hsa:10521
UCSC:uc003avx.4 CTD:10521 GeneCards:GC22M038879 HGNC:HGNC:2740
HPA:CAB024908 MIM:608469 neXtProt:NX_Q92841 PharmGKB:PA27206
HOVERGEN:HBG015893 InParanoid:Q92841 KO:K13178 ChiTaRS:DDX17
GenomeRNAi:10521 NextBio:39902 ArrayExpress:Q92841 Bgee:Q92841
CleanEx:HS_DDX17 Genevestigator:Q92841 GermOnline:ENSG00000100201
GO:GO:2001014 Uniprot:Q92841
Length = 729
Score = 187 (70.9 bits), Expect = 2.4e-11, P = 2.4e-11
Identities = 45/134 (33%), Positives = 68/134 (50%)
Query: 6 EQKLDMLWSFIKAHLNSKILVFLTSCKQVKYVFEAFKKLRPGIPLMCLYGRMKQDRRMAI 65
+ KL L I A +K ++F+ + ++ + + R G P MC++G Q R +
Sbjct: 403 DHKLIQLMEEIMAEKENKTIIFVETKRRCDDLTRRMR--RDGWPAMCIHGDKSQPERDWV 460
Query: 66 YAQFCE-KRSVLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYNSGGRSV 124
+F K +L TDVASRGLD V +V+ D P Y+HR+GRTAR + G +
Sbjct: 461 LNEFRSGKAPILIATDVASRGLDVED-VKFVINYDYPNSSEDYVHRIGRTARSTNKGTAY 519
Query: 125 LFLTPTEMKMLEKL 138
F TP +K +L
Sbjct: 520 TFFTPGNLKQAREL 533
>UNIPROTKB|H3BLZ8 [details] [associations]
symbol:DDX17 "Probable ATP-dependent RNA helicase DDX17"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0009791
"post-embryonic development" evidence=IEA] [GO:0072358
"cardiovascular system development" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 GO:GO:0009791
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 EMBL:Z97056 HGNC:HGNC:2740
ChiTaRS:DDX17 GO:GO:0072358 ProteinModelPortal:H3BLZ8 SMR:H3BLZ8
Ensembl:ENST00000396821 Bgee:H3BLZ8 Uniprot:H3BLZ8
Length = 731
Score = 187 (70.9 bits), Expect = 2.4e-11, P = 2.4e-11
Identities = 45/134 (33%), Positives = 68/134 (50%)
Query: 6 EQKLDMLWSFIKAHLNSKILVFLTSCKQVKYVFEAFKKLRPGIPLMCLYGRMKQDRRMAI 65
+ KL L I A +K ++F+ + ++ + + R G P MC++G Q R +
Sbjct: 403 DHKLIQLMEEIMAEKENKTIIFVETKRRCDDLTRRMR--RDGWPAMCIHGDKSQPERDWV 460
Query: 66 YAQFCE-KRSVLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYNSGGRSV 124
+F K +L TDVASRGLD V +V+ D P Y+HR+GRTAR + G +
Sbjct: 461 LNEFRSGKAPILIATDVASRGLDVED-VKFVINYDYPNSSEDYVHRIGRTARSTNKGTAY 519
Query: 125 LFLTPTEMKMLEKL 138
F TP +K +L
Sbjct: 520 TFFTPGNLKQAREL 533
>UNIPROTKB|F1PID8 [details] [associations]
symbol:DDX17 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095174 OMA:QQFPQPP EMBL:AAEX03007314
Ensembl:ENSCAFT00000002162 Uniprot:F1PID8
Length = 736
Score = 187 (70.9 bits), Expect = 2.4e-11, P = 2.4e-11
Identities = 45/134 (33%), Positives = 68/134 (50%)
Query: 6 EQKLDMLWSFIKAHLNSKILVFLTSCKQVKYVFEAFKKLRPGIPLMCLYGRMKQDRRMAI 65
+ KL L I A +K ++F+ + ++ + + R G P MC++G Q R +
Sbjct: 405 DHKLIQLMEEIMAEKENKTIIFVETKRRCDDLTRRMR--RDGWPAMCIHGDKSQPERDWV 462
Query: 66 YAQFCE-KRSVLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYNSGGRSV 124
+F K +L TDVASRGLD V +V+ D P Y+HR+GRTAR + G +
Sbjct: 463 LNEFRSGKAPILIATDVASRGLDVED-VKFVINYDYPNSSEDYVHRIGRTARSTNKGTAY 521
Query: 125 LFLTPTEMKMLEKL 138
F TP +K +L
Sbjct: 522 TFFTPGNLKQAREL 535
>UNIPROTKB|F1SKQ0 [details] [associations]
symbol:DDX17 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0072358 "cardiovascular system development"
evidence=IEA] [GO:0009791 "post-embryonic development"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0009791 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095174 GO:GO:0072358 OMA:QQFPQPP
EMBL:FP102457 Ensembl:ENSSSCT00000000110 Uniprot:F1SKQ0
Length = 736
Score = 187 (70.9 bits), Expect = 2.4e-11, P = 2.4e-11
Identities = 45/134 (33%), Positives = 68/134 (50%)
Query: 6 EQKLDMLWSFIKAHLNSKILVFLTSCKQVKYVFEAFKKLRPGIPLMCLYGRMKQDRRMAI 65
+ KL L I A +K ++F+ + ++ + + R G P MC++G Q R +
Sbjct: 405 DHKLIQLMEEIMAEKENKTIIFVETKRRCDDLTRRMR--RDGWPAMCIHGDKSQPERDWV 462
Query: 66 YAQFCE-KRSVLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYNSGGRSV 124
+F K +L TDVASRGLD V +V+ D P Y+HR+GRTAR + G +
Sbjct: 463 LNEFRSGKAPILIATDVASRGLDVED-VKFVINYDYPNSSEDYVHRIGRTARSTNKGTAY 521
Query: 125 LFLTPTEMKMLEKL 138
F TP +K +L
Sbjct: 522 TFFTPGNLKQAREL 535
>DICTYBASE|DDB_G0280147 [details] [associations]
symbol:ddx47 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 dictyBase:DDB_G0280147 GO:GO:0005524
GO:GO:0005730 GenomeReviews:CM000152_GR GO:GO:0003723
EMBL:AAFI02000035 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HSSP:Q5STU4 KO:K14777 OMA:IFIPSKF
RefSeq:XP_641271.1 ProteinModelPortal:Q54VT4 SMR:Q54VT4
EnsemblProtists:DDB0234204 GeneID:8622403 KEGG:ddi:DDB_G0280147
Uniprot:Q54VT4
Length = 546
Score = 184 (69.8 bits), Expect = 3.1e-11, P = 3.1e-11
Identities = 44/140 (31%), Positives = 78/140 (55%)
Query: 1 MIVPLEQKLDMLWSFIKAHLNSKI-LVFLTSCKQVKYVFEAFKKLRPGIPLMCLYGRMKQ 59
+ VP + K D ++I L + ++F ++C + + L G + + G M Q
Sbjct: 338 LFVPFKYK-DCYLAYILNELAGNLTIIFTSTCASSTKIAMMLRNL--GFGAIPINGDMDQ 394
Query: 60 DRRMAIYAQFCE-KRSVLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYN 118
+R+A +F + +S+L TDVA+RGLD +VD V+ D P + Y+HRVGRTAR
Sbjct: 395 GKRLASLNKFKQGTKSILVATDVAARGLDI-PSVDLVINYDVPTNSKEYVHRVGRTARAG 453
Query: 119 SGGRSVLFLTPTEMKMLEKL 138
+ GR++ +T +++M +++
Sbjct: 454 NSGRAITIVTQYDVEMYQRI 473
>UNIPROTKB|Q3AFI3 [details] [associations]
symbol:CHY_0229 "ATP-dependent RNA helicase, DEAD box
family" species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268810 KO:K05592 RefSeq:YP_359101.1
ProteinModelPortal:Q3AFI3 STRING:Q3AFI3 GeneID:3727044
KEGG:chy:CHY_0229 PATRIC:21273641 OMA:YAAKGLH
BioCyc:CHYD246194:GJCN-230-MONOMER Uniprot:Q3AFI3
Length = 430
Score = 181 (68.8 bits), Expect = 4.2e-11, P = 4.2e-11
Identities = 48/141 (34%), Positives = 73/141 (51%)
Query: 3 VPLEQKLDMLWSFIKAHLNSKILVFLTSCKQVKYVFEAFKKLR-PGIPLMCLYGRMKQDR 61
+P +K++ L S + + L + +VF C+ K V E ++L G L+G M Q
Sbjct: 221 LPETEKIEGLVSILNSELPIQAIVF---CRTKKRVDEVVEQLNFRGYAAKGLHGDMSQRE 277
Query: 62 RMAIYAQF-CEKRSVLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYNSG 120
R F K +L TDVA+RGLD V V+ D P++ SYIHR+GRT R
Sbjct: 278 RTQTIKSFKAGKTELLVATDVAARGLDIPD-VSHVINFDIPQNPESYIHRIGRTGRAGRE 336
Query: 121 GRSVLFLTPTEMKMLEKLREA 141
G+++ + E K+L+ + EA
Sbjct: 337 GKAITLINYRERKLLKAIEEA 357
>TIGR_CMR|CHY_0229 [details] [associations]
symbol:CHY_0229 "ATP-dependent RNA helicase, DEAD box
family" species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268810 KO:K05592 RefSeq:YP_359101.1
ProteinModelPortal:Q3AFI3 STRING:Q3AFI3 GeneID:3727044
KEGG:chy:CHY_0229 PATRIC:21273641 OMA:YAAKGLH
BioCyc:CHYD246194:GJCN-230-MONOMER Uniprot:Q3AFI3
Length = 430
Score = 181 (68.8 bits), Expect = 4.2e-11, P = 4.2e-11
Identities = 48/141 (34%), Positives = 73/141 (51%)
Query: 3 VPLEQKLDMLWSFIKAHLNSKILVFLTSCKQVKYVFEAFKKLR-PGIPLMCLYGRMKQDR 61
+P +K++ L S + + L + +VF C+ K V E ++L G L+G M Q
Sbjct: 221 LPETEKIEGLVSILNSELPIQAIVF---CRTKKRVDEVVEQLNFRGYAAKGLHGDMSQRE 277
Query: 62 RMAIYAQF-CEKRSVLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYNSG 120
R F K +L TDVA+RGLD V V+ D P++ SYIHR+GRT R
Sbjct: 278 RTQTIKSFKAGKTELLVATDVAARGLDIPD-VSHVINFDIPQNPESYIHRIGRTGRAGRE 336
Query: 121 GRSVLFLTPTEMKMLEKLREA 141
G+++ + E K+L+ + EA
Sbjct: 337 GKAITLINYRERKLLKAIEEA 357
>DICTYBASE|DDB_G0281841 [details] [associations]
symbol:ddx24 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
dictyBase:DDB_G0281841 GO:GO:0005524 GenomeReviews:CM000152_GR
GO:GO:0003723 EMBL:AAFI02000043 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 RefSeq:XP_640452.1 ProteinModelPortal:Q54TD7
EnsemblProtists:DDB0234200 GeneID:8623265 KEGG:ddi:DDB_G0281841
KO:K14805 OMA:NIDHVAH Uniprot:Q54TD7
Length = 940
Score = 186 (70.5 bits), Expect = 4.4e-11, P = 4.4e-11
Identities = 86/310 (27%), Positives = 143/310 (46%)
Query: 5 LEQKLDM-LWSFIKAHLNSKILVFLTSCKQVKYVFEAFKKLRPGIPLMCLYGRMKQDRRM 63
LE+K DM L+ F++ + + LVF+ S + + F L +P+ L+ +M+Q +R+
Sbjct: 648 LEEK-DMYLYYFVERY-PGRTLVFVNSIDCARRLIPIFNILE--VPVFALHAQMQQKQRL 703
Query: 64 AIYAQFCEKRSV-LFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYNSGGR 122
+F +V L TDVA+RGLD V V+ P YIHR GRTAR + G
Sbjct: 704 KNLDRFRTLDNVVLIATDVAARGLDI-PLVQHVIHYQVPRTTQLYIHRSGRTARSDQDGI 762
Query: 123 SVLFLTPTEMKMLEKLREAKIPIHFTKANTKRLQPVSGLLAAL-LVKYPD-MQHRAQKAF 180
SV+ +TP E + KL ++ I T ++ + G+ + L K D + H++ K
Sbjct: 763 SVVLVTPKERPLYIKL-DSSIEHDIGNFPTD-IRYMEGVRDRIELAKEIDKLSHQSLK-- 818
Query: 181 ITYLRSVHIQKDKEVFDVTKLSIDEFSASLGLPMTPKIRFLNQKKG-KMVPVKPVLDNAE 239
+K E D+ +L D F + + R QKK K+ ++ L
Sbjct: 819 -DNREKSWFKKQAEEMDI-ELDGDFFGENSDDEQSEDTRIAEQKKQFKLKQLRAQL---- 872
Query: 240 KEDKLMISREKLLPDNFTEENVDRDILETKDIEDEGKADLLEDVM-RATRV--KKNKKLK 296
K ++SR LLP ++ + ++ ++E + ++ D +A V KK K+L
Sbjct: 873 ---KHLLSRS-LLPRGVSQSYITASAIQ--ELESKSQSSAATDFSNKAKNVIGKKAKQLA 926
Query: 297 INVHRPLGTR 306
I H T+
Sbjct: 927 IENHSKFLTK 936
>TAIR|locus:2038431 [details] [associations]
symbol:AT1G63250 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 EMBL:AC022355 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268799 UniGene:At.52694 ProtClustDB:CLSN2713541
IPI:IPI00538833 PIR:C96658 RefSeq:NP_176514.1 UniGene:At.36158
ProteinModelPortal:Q9C8S9 SMR:Q9C8S9 PaxDb:Q9C8S9 PRIDE:Q9C8S9
EnsemblPlants:AT1G63250.1 GeneID:842631 KEGG:ath:AT1G63250
GeneFarm:1027 TAIR:At1g63250 InParanoid:Q9C8S9 OMA:TSSRAHI
PhylomeDB:Q9C8S9 Genevestigator:Q9C8S9 GermOnline:AT1G63250
Uniprot:Q9C8S9
Length = 798
Score = 185 (70.2 bits), Expect = 4.5e-11, P = 4.5e-11
Identities = 56/224 (25%), Positives = 111/224 (49%)
Query: 1 MIVPLEQKLDMLWSFIKAHLNS----KILVFLTSCKQVKYVFEAFKKLRPGIPLMCLYGR 56
++ P E ++ +K H+N+ KI+VF ++ ++ ++++ + + ++ R
Sbjct: 563 IVAPHESHFHLVPHLLKEHINNTPDYKIIVFCSTGMVTSLMYTLLREMK--LNVREIHAR 620
Query: 57 MKQDRRMAIYAQFCEK-RSVLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTA 115
Q R + +F E R +L +DV++RG+++ V V+QV P D YIHR+GRT
Sbjct: 621 KPQLHRTRVSDEFKESNRLILVTSDVSARGMNYPD-VTLVIQVGIPSDREQYIHRLGRTG 679
Query: 116 RYNSGGRSVLFLTPTEMKMLEKLREAKI-PIHFTKANTKRLQPVSGLLAALLVKYPDMQH 174
R GG +L + P E L++L++ + PI ++ V +A + ++
Sbjct: 680 REGKGGEGLLLIAPWERYFLDELKDLPLEPIPAPDLDSIVKHQVDQSMAKIDTS---IKE 736
Query: 175 RAQKAFITYLRSVHIQKDKEVFDVTKLSIDEFSASLGLPMTPKI 218
A A++ Y SV + ++ + +L+ + F S+GL P +
Sbjct: 737 AAYHAWLGYYNSVR-ETGRDKTTLAELA-NRFCHSIGLEKPPAL 778
>TAIR|locus:2162022 [details] [associations]
symbol:AT5G63120 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0000184 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
EMBL:AB008265 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823 EMBL:AY060589
EMBL:BT000610 EMBL:AK226611 EMBL:AJ010476 IPI:IPI00532778
IPI:IPI00537266 PIR:T51349 RefSeq:NP_568964.1 RefSeq:NP_974985.1
UniGene:At.27361 ProteinModelPortal:Q8W4R3 SMR:Q8W4R3 PaxDb:Q8W4R3
PRIDE:Q8W4R3 EnsemblPlants:AT5G63120.2 GeneID:836432
KEGG:ath:AT5G63120 GeneFarm:979 TAIR:At5g63120 InParanoid:Q8W4R3
OMA:FTHANAK PhylomeDB:Q8W4R3 ProtClustDB:CLSN2690069
Genevestigator:Q8W4R3 GermOnline:AT5G63120 Uniprot:Q8W4R3
Length = 591
Score = 183 (69.5 bits), Expect = 4.7e-11, P = 4.7e-11
Identities = 51/143 (35%), Positives = 76/143 (53%)
Query: 2 IVPLEQKLDMLWSFIKAHLN-SKILVFLTS---CKQVKYVFEAFKKLR-PGIPLMCLYGR 56
IVP +K + L + +K ++ SKIL+F+ + C QV ++LR G P + ++G
Sbjct: 390 IVPTPEKYNRLLTLLKQLMDGSKILIFVETKRGCDQVT------RQLRMDGWPALAIHGD 443
Query: 57 MKQDRRMAIYAQFCEKRS-VLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTA 115
Q R + A+F RS ++ TDVA+RGLD K + VV D P + YIHR+GRT
Sbjct: 444 KTQSERDRVLAEFKSGRSPIMTATDVAARGLDV-KDIKCVVNYDFPNTLEDYIHRIGRTG 502
Query: 116 RYNSGGRSVLFLTPTEMKMLEKL 138
R + G + F T K +L
Sbjct: 503 RAGAKGMAFTFFTHDNAKFAREL 525
>UNIPROTKB|B4DLW8 [details] [associations]
symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003712 "transcription cofactor activity"
evidence=IEA] [GO:0003724 "RNA helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271
Pfam:PF08061 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0003676 GO:GO:0003712
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
EMBL:AC009994 GO:GO:0003724 HOVERGEN:HBG015893 UniGene:Hs.279806
HGNC:HGNC:2746 ChiTaRS:DDX5 EMBL:AK297192 IPI:IPI00798375
STRING:B4DLW8 Ensembl:ENST00000450599 UCSC:uc010wqa.1
Uniprot:B4DLW8
Length = 535
Score = 182 (69.1 bits), Expect = 5.1e-11, P = 5.1e-11
Identities = 52/150 (34%), Positives = 76/150 (50%)
Query: 3 VPLEQKLDMLWSFIKAHLNSKILVFLTSCKQVKYVFEAFKKLR-PGIPLMCLYGRMKQDR 61
V ++KL L I + +K +VF+ + ++ E +K+R G P M ++G Q
Sbjct: 244 VEKDEKLIRLMEEIMSEKENKTIVFVETKRRCD---ELTRKMRRDGWPAMGIHGDKSQQE 300
Query: 62 RMAIYAQFCE-KRSVLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYNSG 120
R + +F K +L TDVASRGLD V +V+ D P YIHR+GRTAR
Sbjct: 301 RDWVLNEFKHGKAPILIATDVASRGLDVED-VKFVINYDYPNSSEDYIHRIGRTARSTKT 359
Query: 121 GRSVLFLTPTEMK----MLEKLREAKIPIH 146
G + F TP +K ++ LREA I+
Sbjct: 360 GTAYTFFTPNNIKQVSDLISVLREANQAIN 389
>ZFIN|ZDB-GENE-031001-8 [details] [associations]
symbol:ddx27 "DEAD (Asp-Glu-Ala-Asp) box polypeptide
27" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-031001-8 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 CTD:55661 HOGENOM:HOG000265456
HOVERGEN:HBG106162 KO:K13181 EMBL:AY648729 IPI:IPI00501087
RefSeq:NP_001002869.1 UniGene:Dr.76523 ProteinModelPortal:Q6DRN0
PRIDE:Q6DRN0 GeneID:378844 KEGG:dre:378844 InParanoid:Q6DRN0
NextBio:20813841 ArrayExpress:Q6DRN0 Bgee:Q6DRN0 Uniprot:Q6DRN0
Length = 776
Score = 184 (69.8 bits), Expect = 5.6e-11, P = 5.6e-11
Identities = 79/281 (28%), Positives = 134/281 (47%)
Query: 47 GIPLMCLYGRMKQDRRMAIYAQFCEKR-SVLFCTDVASRGLDFNKAVDWVVQVDCPEDVA 105
G+ + L+G + Q +R+ +F +++ +L TDVA+RGLD + V V+ P V
Sbjct: 470 GLKVGELHGNLSQTQRLESLRRFKDEQIDILVATDVAARGLDI-EGVKTVINFTMPNTVK 528
Query: 106 SYIHRVGRTARYNSGGRSVLFLTPTEMKMLEKL-REAKIPIHFTKANTKRLQPVSGLLAA 164
Y+HRVGRTAR GRSV + TE KML+++ ++AK P+ KA R+ P
Sbjct: 529 HYVHRVGRTARAGKVGRSVSLVGETERKMLKEIVKKAKFPV---KA---RVIPQE----- 577
Query: 165 LLVKYPDMQHRAQKAFITYLRSVHIQKDKEVFDVTKLSIDE-FSASLGLPMTPKIRF-LN 222
+++K+ D+ + +K L +K+ + S + + S P+ F N
Sbjct: 578 VILKFRDLIEKLEKDVYAVLCLEKEEKEMAHSEAQISSAQKRLTKSEDEKQLPRTWFQTN 637
Query: 223 Q--KKGKMVPVKPVLDNA--EKEDKLMISREKLLPDNFTEENVDRDILETKDI-EDEGKA 277
+ KK +M D A K+ + ++ + EE ++L+++ E K
Sbjct: 638 EERKKDRMAKALQDFDLALRGKKKRAQFLKQGKRKELTAEERAQLEVLKSQMFAERAAKR 697
Query: 278 DLLEDVMRAT-RVKKNKK-LKINVHRPLGTRLVFDEEC-NT 315
+ + RA + +KK LK N + G + VFD+E NT
Sbjct: 698 ERKQKRARAIPEDQPDKKALKKNAGKA-GKKSVFDKELTNT 737
>UNIPROTKB|F1MBQ8 [details] [associations]
symbol:DDX5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0072332 "intrinsic apoptotic signaling pathway by p53
class mediator" evidence=IEA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0060765 "regulation of androgen
receptor signaling pathway" evidence=IEA] [GO:0050681 "androgen
receptor binding" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0043517 "positive regulation of DNA damage response, signal
transduction by p53 class mediator" evidence=IEA] [GO:0036002
"pre-mRNA binding" evidence=IEA] [GO:0033148 "positive regulation
of intracellular estrogen receptor signaling pathway" evidence=IEA]
[GO:0030331 "estrogen receptor binding" evidence=IEA] [GO:0007623
"circadian rhythm" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0003713 "transcription coactivator activity"
evidence=IEA] [GO:0001701 "in utero embryonic development"
evidence=IEA] [GO:0000381 "regulation of alternative mRNA splicing,
via spliceosome" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003724 "RNA helicase
activity" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271
Pfam:PF08061 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005730 GO:GO:0001701 GO:GO:0045944
GO:GO:0000122 GO:GO:0003713 GO:GO:0033148 GO:GO:0043517
GO:GO:0060765 GO:GO:0072332 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 GO:GO:0000381
GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0036002
KO:K12823 OMA:IDAMSGY GeneTree:ENSGT00660000095174 CTD:1655
EMBL:DAAA02049347 IPI:IPI01002739 RefSeq:NP_001178324.1
UniGene:Bt.64934 ProteinModelPortal:F1MBQ8 SMR:F1MBQ8 PRIDE:F1MBQ8
Ensembl:ENSBTAT00000024514 GeneID:533700 KEGG:bta:533700
NextBio:20876124 ArrayExpress:F1MBQ8 Uniprot:F1MBQ8
Length = 614
Score = 182 (69.1 bits), Expect = 6.5e-11, P = 6.5e-11
Identities = 52/150 (34%), Positives = 76/150 (50%)
Query: 3 VPLEQKLDMLWSFIKAHLNSKILVFLTSCKQVKYVFEAFKKLR-PGIPLMCLYGRMKQDR 61
V ++KL L I + +K +VF+ + ++ E +K+R G P M ++G Q
Sbjct: 323 VEKDEKLIRLMEEIMSEKENKTIVFVETKRRCD---ELTRKMRRDGWPAMGIHGDKSQQE 379
Query: 62 RMAIYAQFCE-KRSVLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYNSG 120
R + +F K +L TDVASRGLD V +V+ D P YIHR+GRTAR
Sbjct: 380 RDWVLNEFKHGKAPILIATDVASRGLDVED-VKFVINYDYPNSSEDYIHRIGRTARSTKT 438
Query: 121 GRSVLFLTPTEMK----MLEKLREAKIPIH 146
G + F TP +K ++ LREA I+
Sbjct: 439 GTAYTFFTPNNIKQVSDLISVLREANQAIN 468
>UNIPROTKB|J3KTA4 [details] [associations]
symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003712 "transcription cofactor activity"
evidence=IEA] [GO:0003724 "RNA helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271
Pfam:PF08061 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0003676 GO:GO:0003712
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
EMBL:AC009994 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
HGNC:HGNC:2746 ChiTaRS:DDX5 ProteinModelPortal:J3KTA4
Ensembl:ENST00000578804 Uniprot:J3KTA4
Length = 614
Score = 182 (69.1 bits), Expect = 6.5e-11, P = 6.5e-11
Identities = 52/150 (34%), Positives = 76/150 (50%)
Query: 3 VPLEQKLDMLWSFIKAHLNSKILVFLTSCKQVKYVFEAFKKLR-PGIPLMCLYGRMKQDR 61
V ++KL L I + +K +VF+ + ++ E +K+R G P M ++G Q
Sbjct: 323 VEKDEKLIRLMEEIMSEKENKTIVFVETKRRCD---ELTRKMRRDGWPAMGIHGDKSQQE 379
Query: 62 RMAIYAQFCE-KRSVLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYNSG 120
R + +F K +L TDVASRGLD V +V+ D P YIHR+GRTAR
Sbjct: 380 RDWVLNEFKHGKAPILIATDVASRGLDVED-VKFVINYDYPNSSEDYIHRIGRTARSTKT 438
Query: 121 GRSVLFLTPTEMK----MLEKLREAKIPIH 146
G + F TP +K ++ LREA I+
Sbjct: 439 GTAYTFFTPNNIKQVSDLISVLREANQAIN 468
>UNIPROTKB|P17844 [details] [associations]
symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0001701 "in utero embryonic development" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IEA]
[GO:0005516 "calmodulin binding" evidence=IEA] [GO:0007623
"circadian rhythm" evidence=IEA] [GO:0019899 "enzyme binding"
evidence=IEA] [GO:0045069 "regulation of viral genome replication"
evidence=IEA] [GO:0048306 "calcium-dependent protein binding"
evidence=IEA] [GO:0003724 "RNA helicase activity" evidence=IMP;NAS]
[GO:0016049 "cell growth" evidence=NAS] [GO:0005634 "nucleus"
evidence=IDA;NAS] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IDA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC] [GO:0005515 "protein binding" evidence=IPI]
[GO:0043517 "positive regulation of DNA damage response, signal
transduction by p53 class mediator" evidence=IMP] [GO:0072332
"intrinsic apoptotic signaling pathway by p53 class mediator"
evidence=IMP] [GO:0005730 "nucleolus" evidence=IDA] [GO:2001014
"regulation of skeletal muscle cell differentiation" evidence=ISS]
[GO:0045667 "regulation of osteoblast differentiation"
evidence=ISS] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0050681
"androgen receptor binding" evidence=IDA] [GO:0060765 "regulation
of androgen receptor signaling pathway" evidence=IMP] [GO:0033148
"positive regulation of intracellular estrogen receptor signaling
pathway" evidence=IDA] [GO:0003713 "transcription coactivator
activity" evidence=IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0030331 "estrogen receptor binding" evidence=IDA] [GO:0036002
"pre-mRNA binding" evidence=IDA] [GO:0000381 "regulation of
alternative mRNA splicing, via spliceosome" evidence=IDA]
[GO:0030529 "ribonucleoprotein complex" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271 Pfam:PF08061
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005730 GO:GO:0016049 GO:GO:0001701 GO:GO:0045944
GO:GO:0006351 GO:GO:0000122 GO:GO:0003713 EMBL:CH471109
GO:GO:0033148 GO:GO:0050681 GO:GO:0043517 GO:GO:0030331
GO:GO:0060765 GO:GO:0045667 GO:GO:0072332 GO:GO:0000398
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0045069 GO:GO:0004004 GO:GO:0000381 eggNOG:COG0513
GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0036002
HOGENOM:HOG000268804 KO:K12823 OMA:IDAMSGY HOVERGEN:HBG015893
GO:GO:2001014 EMBL:X52104 EMBL:AF015812 EMBL:BT006943 EMBL:AB451257
EMBL:BC016027 EMBL:X15729 EMBL:AJ010931 IPI:IPI00017617 PIR:JC1087
RefSeq:NP_004387.1 UniGene:Hs.279806 PDB:3FE2 PDB:4A4D PDBsum:3FE2
PDBsum:4A4D ProteinModelPortal:P17844 SMR:P17844 DIP:DIP-29844N
IntAct:P17844 MINT:MINT-5000516 STRING:P17844 PhosphoSite:P17844
DMDM:129383 SWISS-2DPAGE:P17844 PaxDb:P17844 PeptideAtlas:P17844
PRIDE:P17844 DNASU:1655 Ensembl:ENST00000225792
Ensembl:ENST00000574715 GeneID:1655 KEGG:hsa:1655 UCSC:uc002jej.2
CTD:1655 GeneCards:GC17M062494 HGNC:HGNC:2746 HPA:CAB005868
HPA:HPA020043 MIM:180630 neXtProt:NX_P17844 PharmGKB:PA27228
InParanoid:P17844 OrthoDB:EOG4BVRTM PhylomeDB:P17844 ChiTaRS:DDX5
EvolutionaryTrace:P17844 GenomeRNAi:1655 NextBio:6816
ArrayExpress:P17844 Bgee:P17844 CleanEx:HS_DDX5
Genevestigator:P17844 GermOnline:ENSG00000108654 Uniprot:P17844
Length = 614
Score = 182 (69.1 bits), Expect = 6.5e-11, P = 6.5e-11
Identities = 52/150 (34%), Positives = 76/150 (50%)
Query: 3 VPLEQKLDMLWSFIKAHLNSKILVFLTSCKQVKYVFEAFKKLR-PGIPLMCLYGRMKQDR 61
V ++KL L I + +K +VF+ + ++ E +K+R G P M ++G Q
Sbjct: 323 VEKDEKLIRLMEEIMSEKENKTIVFVETKRRCD---ELTRKMRRDGWPAMGIHGDKSQQE 379
Query: 62 RMAIYAQFCE-KRSVLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYNSG 120
R + +F K +L TDVASRGLD V +V+ D P YIHR+GRTAR
Sbjct: 380 RDWVLNEFKHGKAPILIATDVASRGLDVED-VKFVINYDYPNSSEDYIHRIGRTARSTKT 438
Query: 121 GRSVLFLTPTEMK----MLEKLREAKIPIH 146
G + F TP +K ++ LREA I+
Sbjct: 439 GTAYTFFTPNNIKQVSDLISVLREANQAIN 468
>UNIPROTKB|A5A6J2 [details] [associations]
symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
species:9598 "Pan troglodytes" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0000381 "regulation of alternative mRNA splicing, via
spliceosome" evidence=ISS] [GO:0003713 "transcription coactivator
activity" evidence=ISS] [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0005730 "nucleolus" evidence=ISS] [GO:0030331
"estrogen receptor binding" evidence=ISS] [GO:0043517 "positive
regulation of DNA damage response, signal transduction by p53 class
mediator" evidence=ISS] [GO:0045667 "regulation of osteoblast
differentiation" evidence=ISS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0050681 "androgen receptor binding" evidence=ISS] [GO:0060765
"regulation of androgen receptor signaling pathway" evidence=ISS]
[GO:0072332 "intrinsic apoptotic signaling pathway by p53 class
mediator" evidence=ISS] [GO:2001014 "regulation of skeletal muscle
cell differentiation" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012587
Pfam:PF00270 Pfam:PF00271 Pfam:PF08061 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0008380 GO:GO:0006397 GO:GO:0045944 GO:GO:0006351
GO:GO:0005681 GO:GO:0003723 GO:GO:0000122 GO:GO:0003713
GO:GO:0050681 GO:GO:0043517 GO:GO:0030331 GO:GO:0060765
GO:GO:0045667 GO:GO:0072332 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0000381 eggNOG:COG0513
GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 KO:K12823 HOVERGEN:HBG015893 GO:GO:2001014
CTD:1655 OrthoDB:EOG4BVRTM EMBL:AB222120 RefSeq:NP_001138306.1
UniGene:Ptr.274 ProteinModelPortal:A5A6J2 PRIDE:A5A6J2
GeneID:455267 KEGG:ptr:455267 InParanoid:A5A6J2 NextBio:20836697
Uniprot:A5A6J2
Length = 614
Score = 182 (69.1 bits), Expect = 6.5e-11, P = 6.5e-11
Identities = 52/150 (34%), Positives = 76/150 (50%)
Query: 3 VPLEQKLDMLWSFIKAHLNSKILVFLTSCKQVKYVFEAFKKLR-PGIPLMCLYGRMKQDR 61
V ++KL L I + +K +VF+ + ++ E +K+R G P M ++G Q
Sbjct: 323 VEKDEKLIRLMEEIMSEKENKTIVFVETKRRCD---ELTRKMRRDGWPAMGIHGDKSQQE 379
Query: 62 RMAIYAQFCE-KRSVLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYNSG 120
R + +F K +L TDVASRGLD V +V+ D P YIHR+GRTAR
Sbjct: 380 RDWVLNEFKHGKAPILIATDVASRGLDVED-VKFVINYDYPNSSEDYIHRIGRTARSTKT 438
Query: 121 GRSVLFLTPTEMK----MLEKLREAKIPIH 146
G + F TP +K ++ LREA I+
Sbjct: 439 GTAYTFFTPNNIKQVSDLISVLREANQAIN 468
>UNIPROTKB|Q4R6M5 [details] [associations]
symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
species:9541 "Macaca fascicularis" [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0000381 "regulation of alternative mRNA splicing, via
spliceosome" evidence=ISS] [GO:0003713 "transcription coactivator
activity" evidence=ISS] [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0005730 "nucleolus" evidence=ISS] [GO:0030331
"estrogen receptor binding" evidence=ISS] [GO:0043517 "positive
regulation of DNA damage response, signal transduction by p53 class
mediator" evidence=ISS] [GO:0045667 "regulation of osteoblast
differentiation" evidence=ISS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0050681 "androgen receptor binding" evidence=ISS] [GO:0060765
"regulation of androgen receptor signaling pathway" evidence=ISS]
[GO:0072332 "intrinsic apoptotic signaling pathway by p53 class
mediator" evidence=ISS] [GO:2001014 "regulation of skeletal muscle
cell differentiation" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012587
Pfam:PF00270 Pfam:PF00271 Pfam:PF08061 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0008380 GO:GO:0006397 GO:GO:0045944 GO:GO:0006351
GO:GO:0005681 GO:GO:0003723 GO:GO:0000122 GO:GO:0003713
GO:GO:0050681 GO:GO:0043517 GO:GO:0030331 GO:GO:0060765
GO:GO:0045667 GO:GO:0072332 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0000381 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG015893 GO:GO:2001014
HSSP:P10081 EMBL:AB169157 ProteinModelPortal:Q4R6M5 PRIDE:Q4R6M5
Uniprot:Q4R6M5
Length = 614
Score = 182 (69.1 bits), Expect = 6.5e-11, P = 6.5e-11
Identities = 52/150 (34%), Positives = 76/150 (50%)
Query: 3 VPLEQKLDMLWSFIKAHLNSKILVFLTSCKQVKYVFEAFKKLR-PGIPLMCLYGRMKQDR 61
V ++KL L I + +K +VF+ + ++ E +K+R G P M ++G Q
Sbjct: 323 VEKDEKLIRLMEEIMSEKENKTIVFVETKRRCD---ELTRKMRRDGWPAMGIHGDKSQQE 379
Query: 62 RMAIYAQFCE-KRSVLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYNSG 120
R + +F K +L TDVASRGLD V +V+ D P YIHR+GRTAR
Sbjct: 380 RGWVLNEFKHGKAPILIATDVASRGLDVED-VKFVINYDYPNSSEDYIHRIGRTARSTKT 438
Query: 121 GRSVLFLTPTEMK----MLEKLREAKIPIH 146
G + F TP +K ++ LREA I+
Sbjct: 439 GTAYTFFTPNNIKQVSDLISVLREANQAIN 468
>UNIPROTKB|Q5R4I9 [details] [associations]
symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
species:9601 "Pongo abelii" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0000381 "regulation of alternative mRNA splicing, via
spliceosome" evidence=ISS] [GO:0003713 "transcription coactivator
activity" evidence=ISS] [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0005730 "nucleolus" evidence=ISS] [GO:0030331
"estrogen receptor binding" evidence=ISS] [GO:0043517 "positive
regulation of DNA damage response, signal transduction by p53 class
mediator" evidence=ISS] [GO:0045667 "regulation of osteoblast
differentiation" evidence=ISS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0050681 "androgen receptor binding" evidence=ISS] [GO:0060765
"regulation of androgen receptor signaling pathway" evidence=ISS]
[GO:0072332 "intrinsic apoptotic signaling pathway by p53 class
mediator" evidence=ISS] [GO:2001014 "regulation of skeletal muscle
cell differentiation" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012587
Pfam:PF00270 Pfam:PF00271 Pfam:PF08061 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0008380 GO:GO:0006397 GO:GO:0045944 GO:GO:0006351
GO:GO:0005681 GO:GO:0003723 GO:GO:0000122 GO:GO:0003713
GO:GO:0050681 GO:GO:0043517 GO:GO:0030331 GO:GO:0060765
GO:GO:0045667 GO:GO:0072332 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0000381 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 KO:K12823 HOVERGEN:HBG015893
GO:GO:2001014 HSSP:P10081 CTD:1655 EMBL:CR861259
RefSeq:NP_001126958.1 UniGene:Pab.18500 ProteinModelPortal:Q5R4I9
PRIDE:Q5R4I9 GeneID:100173977 KEGG:pon:100173977 InParanoid:Q5R4I9
Uniprot:Q5R4I9
Length = 614
Score = 182 (69.1 bits), Expect = 6.5e-11, P = 6.5e-11
Identities = 52/150 (34%), Positives = 76/150 (50%)
Query: 3 VPLEQKLDMLWSFIKAHLNSKILVFLTSCKQVKYVFEAFKKLR-PGIPLMCLYGRMKQDR 61
V ++KL L I + +K +VF+ + ++ E +K+R G P M ++G Q
Sbjct: 323 VEKDEKLIRLMEEIMSEKENKTIVFVETKRRCD---ELTRKMRRDGWPAMGIHGDKSQQE 379
Query: 62 RMAIYAQFCE-KRSVLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYNSG 120
R + +F K +L TDVASRGLD V +V+ D P YIHR+GRTAR
Sbjct: 380 RDWVLNEFKHGKAPILIATDVASRGLDVED-VKFVINYDYPNSSEDYIHRIGRTARSTKT 438
Query: 121 GRSVLFLTPTEMK----MLEKLREAKIPIH 146
G + F TP +K ++ LREA I+
Sbjct: 439 GTAYTFFTPNNIKQVSDLISVLREANQAIN 468
>MGI|MGI:105037 [details] [associations]
symbol:Ddx5 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 5"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0000381
"regulation of alternative mRNA splicing, via spliceosome"
evidence=ISO] [GO:0001701 "in utero embryonic development"
evidence=IMP] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003712 "transcription cofactor activity" evidence=IDA]
[GO:0003713 "transcription coactivator activity" evidence=ISO]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003724 "RNA helicase
activity" evidence=ISO] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005516 "calmodulin binding" evidence=ISO] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IC]
[GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0005730
"nucleolus" evidence=ISO] [GO:0006200 "ATP catabolic process"
evidence=ISO] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0007623 "circadian rhythm" evidence=IMP]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0016818 "hydrolase activity, acting on
acid anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0019899 "enzyme binding" evidence=ISO] [GO:0030331 "estrogen
receptor binding" evidence=ISO] [GO:0030529 "ribonucleoprotein
complex" evidence=ISO] [GO:0033148 "positive regulation of
intracellular estrogen receptor signaling pathway" evidence=ISO]
[GO:0036002 "pre-mRNA binding" evidence=ISO] [GO:0043517 "positive
regulation of DNA damage response, signal transduction by p53 class
mediator" evidence=ISO] [GO:0045069 "regulation of viral genome
replication" evidence=ISO] [GO:0045667 "regulation of osteoblast
differentiation" evidence=IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISO] [GO:0048306 "calcium-dependent protein binding"
evidence=ISO] [GO:0050681 "androgen receptor binding" evidence=ISO]
[GO:0060765 "regulation of androgen receptor signaling pathway"
evidence=ISO] [GO:0071013 "catalytic step 2 spliceosome"
evidence=ISO] [GO:0072332 "intrinsic apoptotic signaling pathway by
p53 class mediator" evidence=ISO] [GO:2001014 "regulation of
skeletal muscle cell differentiation" evidence=IMP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271 Pfam:PF08061
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:105037
GO:GO:0005524 GO:GO:0005730 GO:GO:0008380 GO:GO:0007623
GO:GO:0001701 GO:GO:0006397 GO:GO:0045944 GO:GO:0006351
GO:GO:0005681 GO:GO:0003723 GO:GO:0000122 GO:GO:0003713
GO:GO:0030529 GO:GO:0050681 GO:GO:0043517 GO:GO:0030331
GO:GO:0060765 GO:GO:0045667 GO:GO:0072332 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 GO:GO:0000381
EMBL:AL603664 eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014
PROSITE:PS51195 HOVERGEN:HBG015893 GO:GO:2001014 OrthoDB:EOG4BVRTM
ChiTaRS:DDX5 EMBL:X65627 IPI:IPI00420363 PIR:I48385
UniGene:Mm.220038 ProteinModelPortal:Q61656 SMR:Q61656
DIP:DIP-32293N IntAct:Q61656 STRING:Q61656 PhosphoSite:Q61656
PaxDb:Q61656 PRIDE:Q61656 InParanoid:Q61656 CleanEx:MM_DDX5
Genevestigator:Q61656 GermOnline:ENSMUSG00000020719 Uniprot:Q61656
Length = 614
Score = 182 (69.1 bits), Expect = 6.5e-11, P = 6.5e-11
Identities = 52/150 (34%), Positives = 76/150 (50%)
Query: 3 VPLEQKLDMLWSFIKAHLNSKILVFLTSCKQVKYVFEAFKKLR-PGIPLMCLYGRMKQDR 61
V ++KL L I + +K +VF+ + ++ E +K+R G P M ++G Q
Sbjct: 323 VEKDEKLIRLMEEIMSEKENKTIVFVETKRRCD---ELTRKMRRDGWPAMGIHGDKSQQE 379
Query: 62 RMAIYAQFCE-KRSVLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYNSG 120
R + +F K +L TDVASRGLD V +V+ D P YIHR+GRTAR
Sbjct: 380 RDWVLNEFKHGKAPILIATDVASRGLDVED-VKFVINYDYPNSSEDYIHRIGRTARSTKT 438
Query: 121 GRSVLFLTPTEMK----MLEKLREAKIPIH 146
G + F TP +K ++ LREA I+
Sbjct: 439 GTAYTFFTPNNIKQVSDLISVLREANQAIN 468
>RGD|619906 [details] [associations]
symbol:Ddx5 "DEAD (Asp-Glu-Ala-Asp) box helicase 5" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0000381 "regulation of alternative mRNA splicing, via
spliceosome" evidence=IEA;ISO] [GO:0001701 "in utero embryonic
development" evidence=IEA;ISO] [GO:0003712 "transcription cofactor
activity" evidence=ISO] [GO:0003713 "transcription coactivator
activity" evidence=IEA;ISO] [GO:0003724 "RNA helicase activity"
evidence=ISO] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005516 "calmodulin binding" evidence=IDA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0007623 "circadian
rhythm" evidence=IEA;ISO] [GO:0019899 "enzyme binding"
evidence=IDA] [GO:0030331 "estrogen receptor binding"
evidence=IEA;ISO] [GO:0030529 "ribonucleoprotein complex"
evidence=ISO] [GO:0033148 "positive regulation of intracellular
estrogen receptor signaling pathway" evidence=IEA;ISO] [GO:0036002
"pre-mRNA binding" evidence=IEA;ISO] [GO:0043517 "positive
regulation of DNA damage response, signal transduction by p53 class
mediator" evidence=IEA;ISO] [GO:0045069 "regulation of viral genome
replication" evidence=IMP] [GO:0045667 "regulation of osteoblast
differentiation" evidence=ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA;ISO] [GO:0048306 "calcium-dependent protein binding"
evidence=IDA] [GO:0050681 "androgen receptor binding"
evidence=IEA;ISO] [GO:0060765 "regulation of androgen receptor
signaling pathway" evidence=IEA;ISO] [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA;ISO] [GO:0072332 "intrinsic apoptotic
signaling pathway by p53 class mediator" evidence=IEA;ISO]
[GO:2001014 "regulation of skeletal muscle cell differentiation"
evidence=ISO] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271
Pfam:PF08061 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
RGD:619906 GO:GO:0005524 GO:GO:0005730 GO:GO:0001701 GO:GO:0045944
GO:GO:0019899 GO:GO:0000122 GO:GO:0003713 GO:GO:0005516
GO:GO:0048306 GO:GO:0033148 GO:GO:0043517 GO:GO:0060765
EMBL:CH473948 GO:GO:0072332 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0045069 GO:GO:0004004
GO:GO:0000381 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0036002
HOGENOM:HOG000268804 KO:K12823 OMA:IDAMSGY
GeneTree:ENSGT00660000095174 HOVERGEN:HBG015893 CTD:1655
EMBL:BC079036 IPI:IPI00464718 RefSeq:NP_001007614.1
UniGene:Rn.162208 IntAct:Q6AYI1 STRING:Q6AYI1
Ensembl:ENSRNOT00000048490 GeneID:287765 KEGG:rno:287765
UCSC:RGD:619906 InParanoid:Q6AYI1 NextBio:626970
Genevestigator:Q6AYI1 Uniprot:Q6AYI1
Length = 615
Score = 182 (69.1 bits), Expect = 6.5e-11, P = 6.5e-11
Identities = 52/150 (34%), Positives = 76/150 (50%)
Query: 3 VPLEQKLDMLWSFIKAHLNSKILVFLTSCKQVKYVFEAFKKLR-PGIPLMCLYGRMKQDR 61
V ++KL L I + +K +VF+ + ++ E +K+R G P M ++G Q
Sbjct: 323 VEKDEKLIRLMEEIMSEKENKTIVFVETKRRCD---ELTRKMRRDGWPAMGIHGDKSQQE 379
Query: 62 RMAIYAQFCE-KRSVLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYNSG 120
R + +F K +L TDVASRGLD V +V+ D P YIHR+GRTAR
Sbjct: 380 RDWVLNEFKHGKAPILIATDVASRGLDVED-VKFVINYDYPNSSEDYIHRIGRTARSTKT 438
Query: 121 GRSVLFLTPTEMK----MLEKLREAKIPIH 146
G + F TP +K ++ LREA I+
Sbjct: 439 GTAYTFFTPNNIKQVSDLISVLREANQAIN 468
>UNIPROTKB|F1PEA6 [details] [associations]
symbol:DDX5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003724 "RNA helicase
activity" evidence=IEA] [GO:0003712 "transcription cofactor
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271
Pfam:PF08061 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0003676 GO:GO:0003712
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195 OMA:IDAMSGY
GeneTree:ENSGT00660000095174 EMBL:AAEX03006361
Ensembl:ENSCAFT00000018595 Uniprot:F1PEA6
Length = 671
Score = 182 (69.1 bits), Expect = 7.5e-11, P = 7.5e-11
Identities = 52/150 (34%), Positives = 76/150 (50%)
Query: 3 VPLEQKLDMLWSFIKAHLNSKILVFLTSCKQVKYVFEAFKKLR-PGIPLMCLYGRMKQDR 61
V ++KL L I + +K +VF+ + ++ E +K+R G P M ++G Q
Sbjct: 380 VEKDEKLIRLMEEIMSEKENKTIVFVETKRRCD---ELTRKMRRDGWPAMGIHGDKSQQE 436
Query: 62 RMAIYAQFCE-KRSVLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYNSG 120
R + +F K +L TDVASRGLD V +V+ D P YIHR+GRTAR
Sbjct: 437 RDWVLNEFKHGKAPILIATDVASRGLDVED-VKFVINYDYPNSSEDYIHRIGRTARSTKT 495
Query: 121 GRSVLFLTPTEMK----MLEKLREAKIPIH 146
G + F TP +K ++ LREA I+
Sbjct: 496 GTAYTFFTPNNIKQVSDLISVLREANQAIN 525
>UNIPROTKB|Q5L3G9 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:235909 "Geobacillus kaustophilus HTA426" [GO:0003723 "RNA
binding" evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
[GO:0043590 "bacterial nucleoid" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0043590 HOGENOM:HOG000268810 KO:K05592
OMA:IIDHINR HSSP:Q58083 EMBL:BA000043 RefSeq:YP_146079.1
ProteinModelPortal:Q5L3G9 GeneID:3184893 GenomeReviews:BA000043_GR
KEGG:gka:GK0226 PATRIC:21961545 ProtClustDB:CLSK712472
BioCyc:GKAU235909:GJO7-260-MONOMER Uniprot:Q5L3G9
Length = 467
Score = 178 (67.7 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 48/153 (31%), Positives = 79/153 (51%)
Query: 6 EQKLDMLWSFIKAHLNSKILVFLTSCKQVKYVFEAFKKLRPGIPLMCLYGRMKQDRRMAI 65
++K D+L + +VF + ++V + EA LR G ++G + Q +R+++
Sbjct: 225 KKKFDILTRLLDIQAPELAIVFGRTKRRVDELAEALN-LR-GYAAEGIHGDLSQAKRLSV 282
Query: 66 YAQFCEKR-SVLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYNSGGRSV 124
+F E +L TDVA+RGLD + V V D P+D SY+HR+GRT R G ++
Sbjct: 283 LRKFKEGAIEILVATDVAARGLDIS-GVTHVYNFDIPQDPESYVHRIGRTGRAGKTGVAM 341
Query: 125 LFLTPTEMKMLEKLREAKIPIHFTKANTKRLQP 157
F+TP E+ L + TK +R++P
Sbjct: 342 TFVTPREIGQLHHIERT------TKRKMERMKP 368
>ZFIN|ZDB-GENE-030131-925 [details] [associations]
symbol:ddx5 "DEAD (Asp-Glu-Ala-Asp) box polypeptide
5" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-030131-925 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00660000095174
EMBL:BX085195 IPI:IPI00488168 Ensembl:ENSDART00000055492
ArrayExpress:F1Q5L6 Bgee:F1Q5L6 Uniprot:F1Q5L6
Length = 617
Score = 180 (68.4 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 50/146 (34%), Positives = 73/146 (50%)
Query: 6 EQKLDMLWSFIKAHLNSKILVFLTSCKQVKYVFEAFKKLRPGIPLMCLYGRMKQDRRMAI 65
E KL L I + +K ++F+ + ++ + + R G P M ++G Q R +
Sbjct: 328 EDKLIRLLEEIMSEKENKTIIFVETKRRCDDLTRRMR--RDGWPAMGIHGDKNQQERDWV 385
Query: 66 YAQF-CEKRSVLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYNSGGRSV 124
+F K +L TDVASRGLD V +V+ D P + YIHR+GRTAR G +
Sbjct: 386 LNEFKYGKAPILIATDVASRGLDVED-VKFVINFDYPNNSEDYIHRIGRTARSQKTGTAY 444
Query: 125 LFLTPTEMK----MLEKLREAKIPIH 146
F TP MK ++ LREA I+
Sbjct: 445 TFFTPNNMKQAHDLVSVLREANQAIN 470
>WB|WBGene00019245 [details] [associations]
symbol:sacy-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0040010 "positive regulation of
growth rate" evidence=IMP] [GO:0002009 "morphogenesis of an
epithelium" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] [GO:0040035 "hermaphrodite genitalia
development" evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR001878 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00343 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0008340 GO:GO:0009792 GO:GO:0002009 GO:GO:0005737
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0008270
GO:GO:0003676 GO:GO:0040035 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00620000087942 HSSP:P10081 KO:K13116
OMA:KDQEERS HOGENOM:HOG000268792 EMBL:FO081567 RefSeq:NP_491962.1
ProteinModelPortal:Q9N5K1 SMR:Q9N5K1 PaxDb:Q9N5K1
EnsemblMetazoa:H27M09.1 GeneID:172413 KEGG:cel:CELE_H27M09.1
UCSC:H27M09.1 CTD:172413 WormBase:H27M09.1 InParanoid:Q9N5K1
NextBio:875413 Uniprot:Q9N5K1
Length = 630
Score = 180 (68.4 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 42/120 (35%), Positives = 67/120 (55%)
Query: 23 KILVFLTSCKQVKYVFEAFKKLRPGIPLMCLYGRMKQ-DRRMAIYAQFCEKRSVLFCTDV 81
K+L+F V ++E L G+ + ++G Q DR I A ++ VL TDV
Sbjct: 443 KVLIFAEKKVDVDNIYEYL--LVKGVEVASIHGGKDQSDRHAGIEAFRKNEKDVLVATDV 500
Query: 82 ASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYNSGGRSVLFLTP-TEMKMLEKLRE 140
AS+GLDF + ++ V+ D PED+ +Y+HR+GRT R G + F+ +EM +L L++
Sbjct: 501 ASKGLDF-QGIEHVINFDMPEDIENYVHRIGRTGRSGRKGLATTFINKKSEMSVLSDLKQ 559
>UNIPROTKB|Q73EU1 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:222523 "Bacillus cereus ATCC 10987" [GO:0003723 "RNA
binding" evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
[GO:0043590 "bacterial nucleoid" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0043590 HOGENOM:HOG000268810 KO:K05592
OMA:IIDHINR ProtClustDB:CLSK915749 HSSP:Q58083 EMBL:AE017194
RefSeq:NP_976595.1 ProteinModelPortal:Q73EU1 STRING:Q73EU1
DNASU:2752637 EnsemblBacteria:EBBACT00000029857 GeneID:2752637
GenomeReviews:AE017194_GR KEGG:bca:BCE_0267 PATRIC:18849372
Uniprot:Q73EU1
Length = 525
Score = 181 (68.8 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 49/142 (34%), Positives = 78/142 (54%)
Query: 6 EQKLDMLWSFIKAHLNSKILVFLTSCKQVKYVFEAFKKLRPGIPLMCLYGRMKQDRRMAI 65
++K D+L + +VF + ++V + EA LR G ++G + Q +RM++
Sbjct: 225 KKKFDVLTRLLDIQSPELAIVFGRTKRRVDELSEALN-LR-GYAAEGIHGDLTQAKRMSV 282
Query: 66 YAQFCEKR-SVLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYNSGGRSV 124
+F E VL TDVA+RGLD + V V D P+D SY+HR+GRT R G ++
Sbjct: 283 LRKFKEGSIEVLVATDVAARGLDIS-GVTHVYNFDIPQDPESYVHRIGRTGRAGKKGIAM 341
Query: 125 LFLTPTE---MKMLEKLREAKI 143
LF+TP E +K +E+ + K+
Sbjct: 342 LFVTPRESGQLKNIERTTKRKM 363
Score = 39 (18.8 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 6/15 (40%), Positives = 11/15 (73%)
Query: 334 QDQKTEYYKKIREEL 348
+++ YYK+I EE+
Sbjct: 391 ENENLAYYKRIAEEM 405
>UNIPROTKB|A0R8U6 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:412694 "Bacillus thuringiensis str. Al Hakam" [GO:0003723
"RNA binding" evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
[GO:0043590 "bacterial nucleoid" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0043590 EMBL:CP000485 RefSeq:YP_893146.1
ProteinModelPortal:A0R8U6 STRING:A0R8U6
EnsemblBacteria:EBBACT00000069056 GeneID:4546566
GenomeReviews:CP000485_GR KEGG:btl:BALH_0232 PATRIC:18992499
HOGENOM:HOG000268810 KO:K05592 OMA:IIDHINR ProtClustDB:CLSK915749
BioCyc:BTHU412694:GH1W-393-MONOMER Uniprot:A0R8U6
Length = 528
Score = 181 (68.8 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 49/142 (34%), Positives = 78/142 (54%)
Query: 6 EQKLDMLWSFIKAHLNSKILVFLTSCKQVKYVFEAFKKLRPGIPLMCLYGRMKQDRRMAI 65
++K D+L + +VF + ++V + EA LR G ++G + Q +RM++
Sbjct: 225 KKKFDVLTRLLDIQSPELAIVFGRTKRRVDELSEALN-LR-GYAAEGIHGDLTQAKRMSV 282
Query: 66 YAQFCEKR-SVLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYNSGGRSV 124
+F E VL TDVA+RGLD + V V D P+D SY+HR+GRT R G ++
Sbjct: 283 LRKFKEGSIEVLVATDVAARGLDIS-GVTHVYNFDIPQDPESYVHRIGRTGRAGKKGIAM 341
Query: 125 LFLTPTE---MKMLEKLREAKI 143
LF+TP E +K +E+ + K+
Sbjct: 342 LFVTPRESGQLKNIERTTKRKM 363
Score = 39 (18.8 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 6/15 (40%), Positives = 11/15 (73%)
Query: 334 QDQKTEYYKKIREEL 348
+++ YYK+I EE+
Sbjct: 391 ENENLAYYKRIAEEM 405
Score = 39 (18.8 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 15/75 (20%), Positives = 35/75 (46%)
Query: 257 TEENVDRDILETKDIEDEGKADLLEDVMRATRVKKNKKLKINVHRPLGTRLVFDEECNTV 316
T+ +DR T D EG+ L+ + +++T +N + ++ + ++ + + TV
Sbjct: 359 TKRKMDRMDAPTLDEALEGQQRLIAEKLQSTIENEN----LAYYKRIAEEMLEENDSVTV 414
Query: 317 PPLAMLADTKNANVS 331
A+ TK + +
Sbjct: 415 VAAALKMMTKEPDTT 429
>UNIPROTKB|Q63GX5 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:288681 "Bacillus cereus E33L" [GO:0003723 "RNA binding"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS] [GO:0043590
"bacterial nucleoid" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0043590 KO:K05592 OMA:IIDHINR
ProtClustDB:CLSK915749 HSSP:Q58083 EMBL:CP000001 RefSeq:YP_081836.1
ProteinModelPortal:Q63GX5 STRING:Q63GX5
EnsemblBacteria:EBBACT00000041470 GeneID:3022962
GenomeReviews:CP000001_GR KEGG:bcz:BCZK0221 PATRIC:18883656
BioCyc:BCER288681:GHG7-745-MONOMER Uniprot:Q63GX5
Length = 528
Score = 181 (68.8 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 49/142 (34%), Positives = 78/142 (54%)
Query: 6 EQKLDMLWSFIKAHLNSKILVFLTSCKQVKYVFEAFKKLRPGIPLMCLYGRMKQDRRMAI 65
++K D+L + +VF + ++V + EA LR G ++G + Q +RM++
Sbjct: 225 KKKFDVLTRLLDIQSPELAIVFGRTKRRVDELSEALN-LR-GYAAEGIHGDLTQAKRMSV 282
Query: 66 YAQFCEKR-SVLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYNSGGRSV 124
+F E VL TDVA+RGLD + V V D P+D SY+HR+GRT R G ++
Sbjct: 283 LRKFKEGSIEVLVATDVAARGLDIS-GVTHVYNFDIPQDPESYVHRIGRTGRAGKKGIAM 341
Query: 125 LFLTPTE---MKMLEKLREAKI 143
LF+TP E +K +E+ + K+
Sbjct: 342 LFVTPRESGQLKNIERTTKRKM 363
Score = 39 (18.8 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 6/15 (40%), Positives = 11/15 (73%)
Query: 334 QDQKTEYYKKIREEL 348
+++ YYK+I EE+
Sbjct: 391 ENENLAYYKRIAEEM 405
Score = 39 (18.8 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 15/75 (20%), Positives = 35/75 (46%)
Query: 257 TEENVDRDILETKDIEDEGKADLLEDVMRATRVKKNKKLKINVHRPLGTRLVFDEECNTV 316
T+ +DR T D EG+ L+ + +++T +N + ++ + ++ + + TV
Sbjct: 359 TKRKMDRMDAPTLDEALEGQQRLIAEKLQSTIENEN----LAYYKRIAEEMLEENDSVTV 414
Query: 317 PPLAMLADTKNANVS 331
A+ TK + +
Sbjct: 415 VAAALKMMTKEPDTT 429
>UNIPROTKB|Q6HPE6 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:281309 "Bacillus thuringiensis serovar konkukian str.
97-27" [GO:0003723 "RNA binding" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005524
"ATP binding" evidence=ISS] [GO:0043590 "bacterial nucleoid"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GO:GO:0043590 HOGENOM:HOG000268810 KO:K05592 OMA:IIDHINR
ProtClustDB:CLSK915749 HSSP:Q58083 EMBL:AE017355 RefSeq:YP_034574.1
ProteinModelPortal:Q6HPE6 EnsemblBacteria:EBBACT00000074889
GeneID:2854643 GenomeReviews:AE017355_GR KEGG:btk:BT9727_0219
PATRIC:18980863 BioCyc:BTHU281309:GJID-254-MONOMER Uniprot:Q6HPE6
Length = 528
Score = 181 (68.8 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 49/142 (34%), Positives = 78/142 (54%)
Query: 6 EQKLDMLWSFIKAHLNSKILVFLTSCKQVKYVFEAFKKLRPGIPLMCLYGRMKQDRRMAI 65
++K D+L + +VF + ++V + EA LR G ++G + Q +RM++
Sbjct: 225 KKKFDVLTRLLDIQSPELAIVFGRTKRRVDELSEALN-LR-GYAAEGIHGDLTQAKRMSV 282
Query: 66 YAQFCEKR-SVLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYNSGGRSV 124
+F E VL TDVA+RGLD + V V D P+D SY+HR+GRT R G ++
Sbjct: 283 LRKFKEGSIEVLVATDVAARGLDIS-GVTHVYNFDIPQDPESYVHRIGRTGRAGKKGIAM 341
Query: 125 LFLTPTE---MKMLEKLREAKI 143
LF+TP E +K +E+ + K+
Sbjct: 342 LFVTPRESGQLKNIERTTKRKM 363
Score = 39 (18.8 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 6/15 (40%), Positives = 11/15 (73%)
Query: 334 QDQKTEYYKKIREEL 348
+++ YYK+I EE+
Sbjct: 391 ENENLAYYKRIAEEM 405
Score = 39 (18.8 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 15/75 (20%), Positives = 35/75 (46%)
Query: 257 TEENVDRDILETKDIEDEGKADLLEDVMRATRVKKNKKLKINVHRPLGTRLVFDEECNTV 316
T+ +DR T D EG+ L+ + +++T +N + ++ + ++ + + TV
Sbjct: 359 TKRKMDRMDAPTLDEALEGQQRLIAEKLQSTIENEN----LAYYKRIAEEMLEENDSVTV 414
Query: 317 PPLAMLADTKNANVS 331
A+ TK + +
Sbjct: 415 VAAALKMMTKEPDTT 429
>UNIPROTKB|Q81VG0 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:1392 "Bacillus anthracis" [GO:0003723 "RNA binding"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] [GO:0043590 "bacterial nucleoid"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043590
HOGENOM:HOG000268810 KO:K05592 OMA:IIDHINR ProtClustDB:CLSK915749
RefSeq:NP_842800.1 RefSeq:YP_016853.1 RefSeq:YP_026518.1
HSSP:Q58083 ProteinModelPortal:Q81VG0 DNASU:1087008
EnsemblBacteria:EBBACT00000010496 EnsemblBacteria:EBBACT00000018111
EnsemblBacteria:EBBACT00000022275 GeneID:1087008 GeneID:2818435
GeneID:2849489 KEGG:ban:BA_0247 KEGG:bar:GBAA_0247 KEGG:bat:BAS0233
BioCyc:BANT260799:GJAJ-255-MONOMER
BioCyc:BANT261594:GJ7F-263-MONOMER Uniprot:Q81VG0
Length = 528
Score = 181 (68.8 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 49/142 (34%), Positives = 78/142 (54%)
Query: 6 EQKLDMLWSFIKAHLNSKILVFLTSCKQVKYVFEAFKKLRPGIPLMCLYGRMKQDRRMAI 65
++K D+L + +VF + ++V + EA LR G ++G + Q +RM++
Sbjct: 225 KKKFDVLTRLLDIQSPELAIVFGRTKRRVDELSEALN-LR-GYAAEGIHGDLTQAKRMSV 282
Query: 66 YAQFCEKR-SVLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYNSGGRSV 124
+F E VL TDVA+RGLD + V V D P+D SY+HR+GRT R G ++
Sbjct: 283 LRKFKEGSIEVLVATDVAARGLDIS-GVTHVYNFDIPQDPESYVHRIGRTGRAGKKGIAM 341
Query: 125 LFLTPTE---MKMLEKLREAKI 143
LF+TP E +K +E+ + K+
Sbjct: 342 LFVTPRESGQLKNIERTTKRKM 363
Score = 39 (18.8 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 6/15 (40%), Positives = 11/15 (73%)
Query: 334 QDQKTEYYKKIREEL 348
+++ YYK+I EE+
Sbjct: 391 ENENLAYYKRIAEEM 405
Score = 39 (18.8 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 15/75 (20%), Positives = 35/75 (46%)
Query: 257 TEENVDRDILETKDIEDEGKADLLEDVMRATRVKKNKKLKINVHRPLGTRLVFDEECNTV 316
T+ +DR T D EG+ L+ + +++T +N + ++ + ++ + + TV
Sbjct: 359 TKRKMDRMDAPTLDEALEGQQRLIAEKLQSTIENEN----LAYYKRIAEEMLEENDSVTV 414
Query: 317 PPLAMLADTKNANVS 331
A+ TK + +
Sbjct: 415 VAAALKMMTKEPDTT 429
>TIGR_CMR|BA_0247 [details] [associations]
symbol:BA_0247 "ATP-dependent RNA helicase, DEAD/DEAH box
family" species:198094 "Bacillus anthracis str. Ames" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043590
HOGENOM:HOG000268810 KO:K05592 OMA:IIDHINR ProtClustDB:CLSK915749
RefSeq:NP_842800.1 RefSeq:YP_016853.1 RefSeq:YP_026518.1
HSSP:Q58083 ProteinModelPortal:Q81VG0 DNASU:1087008
EnsemblBacteria:EBBACT00000010496 EnsemblBacteria:EBBACT00000018111
EnsemblBacteria:EBBACT00000022275 GeneID:1087008 GeneID:2818435
GeneID:2849489 KEGG:ban:BA_0247 KEGG:bar:GBAA_0247 KEGG:bat:BAS0233
BioCyc:BANT260799:GJAJ-255-MONOMER
BioCyc:BANT261594:GJ7F-263-MONOMER Uniprot:Q81VG0
Length = 528
Score = 181 (68.8 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 49/142 (34%), Positives = 78/142 (54%)
Query: 6 EQKLDMLWSFIKAHLNSKILVFLTSCKQVKYVFEAFKKLRPGIPLMCLYGRMKQDRRMAI 65
++K D+L + +VF + ++V + EA LR G ++G + Q +RM++
Sbjct: 225 KKKFDVLTRLLDIQSPELAIVFGRTKRRVDELSEALN-LR-GYAAEGIHGDLTQAKRMSV 282
Query: 66 YAQFCEKR-SVLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYNSGGRSV 124
+F E VL TDVA+RGLD + V V D P+D SY+HR+GRT R G ++
Sbjct: 283 LRKFKEGSIEVLVATDVAARGLDIS-GVTHVYNFDIPQDPESYVHRIGRTGRAGKKGIAM 341
Query: 125 LFLTPTE---MKMLEKLREAKI 143
LF+TP E +K +E+ + K+
Sbjct: 342 LFVTPRESGQLKNIERTTKRKM 363
Score = 39 (18.8 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 6/15 (40%), Positives = 11/15 (73%)
Query: 334 QDQKTEYYKKIREEL 348
+++ YYK+I EE+
Sbjct: 391 ENENLAYYKRIAEEM 405
Score = 39 (18.8 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 15/75 (20%), Positives = 35/75 (46%)
Query: 257 TEENVDRDILETKDIEDEGKADLLEDVMRATRVKKNKKLKINVHRPLGTRLVFDEECNTV 316
T+ +DR T D EG+ L+ + +++T +N + ++ + ++ + + TV
Sbjct: 359 TKRKMDRMDAPTLDEALEGQQRLIAEKLQSTIENEN----LAYYKRIAEEMLEENDSVTV 414
Query: 317 PPLAMLADTKNANVS 331
A+ TK + +
Sbjct: 415 VAAALKMMTKEPDTT 429
>SGD|S000001107 [details] [associations]
symbol:RRP3 "Protein involved in rRNA processing"
species:4932 "Saccharomyces cerevisiae" [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IDA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0000462 "maturation of
SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=IMP] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0008186 "RNA-dependent ATPase activity"
evidence=IDA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IC] [GO:0006364 "rRNA processing"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 SGD:S000001107 GO:GO:0005524
GO:GO:0005730 EMBL:BK006934 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 EMBL:U00061 HOGENOM:HOG000268802
GO:GO:0000462 GeneTree:ENSGT00670000098028 KO:K14777 OMA:IFIPSKF
OrthoDB:EOG4ZPJ3P EMBL:AY389302 EMBL:AY389303 PIR:S46713
RefSeq:NP_011932.2 ProteinModelPortal:P38712 SMR:P38712
DIP:DIP-6533N IntAct:P38712 MINT:MINT-518716 STRING:P38712
PaxDb:P38712 PeptideAtlas:P38712 EnsemblFungi:YHR065C GeneID:856462
KEGG:sce:YHR065C CYGD:YHR065c NextBio:982111 Genevestigator:P38712
GermOnline:YHR065C Uniprot:P38712
Length = 501
Score = 178 (67.7 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 41/96 (42%), Positives = 60/96 (62%)
Query: 53 LYGRMKQDRRMAIYAQF-CEKRSVLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRV 111
L+G + Q++RM F KRS+L TDVA+RGLD +VD VV D P D SYIHRV
Sbjct: 351 LHGDLNQNQRMGSLDLFKAGKRSILVATDVAARGLDI-PSVDIVVNYDIPVDSKSYIHRV 409
Query: 112 GRTARYNSGGRSVLFLTPTEMKMLEKLREA---KIP 144
GRTAR G+S+ ++ +++++ ++ E K+P
Sbjct: 410 GRTARAGRSGKSISLVSQYDLELILRIEEVLGKKLP 445
>UNIPROTKB|Q81IT9 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:226900 "Bacillus cereus ATCC 14579" [GO:0003723 "RNA
binding" evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
[GO:0043590 "bacterial nucleoid" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0043590 KO:K05592 OMA:IIDHINR
ProtClustDB:CLSK915749 HSSP:Q58083 EMBL:AE016877 RefSeq:NP_830127.1
STRING:Q81IT9 DNASU:1202612 EnsemblBacteria:EBBACT00000032730
GeneID:1202612 GenomeReviews:AE016877_GR KEGG:bce:BC0259
PATRIC:32596146 BioCyc:BCER226900:GJEU-261-MONOMER Uniprot:Q81IT9
Length = 533
Score = 181 (68.8 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
Identities = 49/142 (34%), Positives = 78/142 (54%)
Query: 6 EQKLDMLWSFIKAHLNSKILVFLTSCKQVKYVFEAFKKLRPGIPLMCLYGRMKQDRRMAI 65
++K D+L + +VF + ++V + EA LR G ++G + Q +RM++
Sbjct: 225 KKKFDVLTRLLDIQSPELAIVFGRTKRRVDELSEALN-LR-GYAAEGIHGDLTQAKRMSV 282
Query: 66 YAQFCEKR-SVLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYNSGGRSV 124
+F E VL TDVA+RGLD + V V D P+D SY+HR+GRT R G ++
Sbjct: 283 LRKFKEGSIEVLVATDVAARGLDIS-GVTHVYNFDIPQDPESYVHRIGRTGRAGKKGIAM 341
Query: 125 LFLTPTE---MKMLEKLREAKI 143
LF+TP E +K +E+ + K+
Sbjct: 342 LFVTPRESGQLKNIERTTKRKM 363
Score = 39 (18.8 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
Identities = 6/15 (40%), Positives = 11/15 (73%)
Query: 334 QDQKTEYYKKIREEL 348
+++ YYK+I EE+
Sbjct: 391 ENENLAYYKRIAEEM 405
Score = 39 (18.8 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
Identities = 15/75 (20%), Positives = 35/75 (46%)
Query: 257 TEENVDRDILETKDIEDEGKADLLEDVMRATRVKKNKKLKINVHRPLGTRLVFDEECNTV 316
T+ +DR T D EG+ L+ + +++T +N + ++ + ++ + + TV
Sbjct: 359 TKRKMDRMDAPTLDEALEGQQRLIAEKLQSTIENEN----LAYYKRIAEEMLEENDSVTV 414
Query: 317 PPLAMLADTKNANVS 331
A+ TK + +
Sbjct: 415 VAAALKMMTKEPDTT 429
>UNIPROTKB|P96614 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:224308 "Bacillus subtilis subsp. subtilis str. 168"
[GO:0003723 "RNA binding" evidence=IDA] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IDA] [GO:0009409
"response to cold" evidence=IGI] [GO:0010501 "RNA secondary
structure unwinding" evidence=IDA] [GO:0043590 "bacterial nucleoid"
evidence=IDA] [GO:0005840 "ribosome" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005737 GO:GO:0009409
GO:GO:0003723 EMBL:AL009126 GenomeReviews:AL009126_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043590
HOGENOM:HOG000268810 HSSP:Q58083 ProtClustDB:CLSK886742
EMBL:AB001488 PIR:D69772 RefSeq:NP_388339.1
ProteinModelPortal:P96614 SMR:P96614 IntAct:P96614 DNASU:938170
EnsemblBacteria:EBBACT00000000739 GeneID:938170 KEGG:bsu:BSU04580
PATRIC:18972500 GenoList:BSU04580 BioCyc:BSUB:BSU04580-MONOMER
GO:GO:0010501 Uniprot:P96614
Length = 494
Score = 177 (67.4 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 47/135 (34%), Positives = 69/135 (51%)
Query: 7 QKLDMLWSFIKAHLNSKILVFLTSCKQVKYVFEAFKKLRPGIPLMCLYGRMKQDRRMAIY 66
+K D L + +VF + ++V + EA LR G ++G + Q +RM
Sbjct: 227 KKFDTLTRLLDIQSPELAIVFGRTKRRVDELAEALN-LR-GYAAEGIHGDLTQAKRMVAL 284
Query: 67 AQFCEKR-SVLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYNSGGRSVL 125
+F E VL TDVA+RGLD + V V D P+D SY+HR+GRT R G ++
Sbjct: 285 RKFKEGAIEVLVATDVAARGLDIS-GVTHVYNFDVPQDPESYVHRIGRTGRAGKTGMAMT 343
Query: 126 FLTPTEMKMLEKLRE 140
F+TP E ML + +
Sbjct: 344 FITPREKSMLRAIEQ 358
>TAIR|locus:2130918 [details] [associations]
symbol:AT4G16630 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0003723 EMBL:Z97341 EMBL:AL161544 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000265456 KO:K13181
OMA:RIRKRDH EMBL:AJ010475 EMBL:AK228353 IPI:IPI00542014 PIR:D71433
PIR:T51310 RefSeq:NP_193396.3 UniGene:At.49
ProteinModelPortal:Q9ZRZ8 SMR:Q9ZRZ8 IntAct:Q9ZRZ8 STRING:Q9ZRZ8
PaxDb:Q9ZRZ8 PRIDE:Q9ZRZ8 EnsemblPlants:AT4G16630.1 GeneID:827364
KEGG:ath:AT4G16630 GeneFarm:955 TAIR:At4g16630 InParanoid:Q9ZRZ8
PhylomeDB:Q9ZRZ8 ProtClustDB:CLSN2690957 Genevestigator:Q9ZRZ8
GermOnline:AT4G16630 Uniprot:Q9ZRZ8
Length = 789
Score = 180 (68.4 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 78/298 (26%), Positives = 137/298 (45%)
Query: 11 MLWSFIKAHLNSKILVFLTSCKQVKYVFEAFKKLRPGIPLMCLYGRMKQDRRMAIYAQFC 70
+L S SK+++F + KQ + + L G+ L+G + Q +R+ F
Sbjct: 402 VLLSLCTRTFKSKVIIF-SGTKQAAHRLKILFGLA-GLKAAELHGNLTQAQRLDSLELF- 458
Query: 71 EKRSV--LFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYNSGGRSVLFLT 128
K+ V L TDVA+RGLD V V+ CP ++ SY+HRVGRTAR G +V F+T
Sbjct: 459 RKQEVDFLIATDVAARGLDII-GVQTVINYACPREIDSYVHRVGRTARAGREGYAVTFVT 517
Query: 129 PTEMKMLE--------KLREAKIPIHFTKANTKRLQPVSGLLAALLVKYPDMQHRAQKAF 180
++ +L+ KL+ IP ++ + + +A++ D + +KA
Sbjct: 518 DSDRSLLKVIAKKVGSKLKSRVIPEQSIVKWSQIIDEMEDQYSAVISAERD-ERALRKAE 576
Query: 181 ITYLRSVHIQKDK-EVFDVTKLS--IDEFSASLGLPMTPKIRFLNQKKGKMVPVKPVLDN 237
+ + ++ ++ + + E++ K + + E L + K N G++V D
Sbjct: 577 MEFAKAENMLEHRDEIYARPKRTWFMTEKEKKL-VAQAEKDSAGNPAGGELVSADRAEDL 635
Query: 238 AEKEDKLMISREKLLPDNFTEE-NVDRDILETKDIEDEGKADLLEDVMRATRVKKNKK 294
KE K REK LP + R++LE + E+E + + ++ +R K KK
Sbjct: 636 KMKE-KRKREREKNLPRKKRRKLEAAREMLEDNEGEEEEEDEEGDEKRGRSRGKDKKK 692
>UNIPROTKB|F1NM08 [details] [associations]
symbol:DDX5 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003712 "transcription cofactor activity" evidence=IEA]
[GO:0003724 "RNA helicase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271 Pfam:PF08061
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0003676 GO:GO:0003712 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00660000095174
EMBL:AADN02030017 IPI:IPI00680367 Ensembl:ENSGALT00000005586
ArrayExpress:F1NM08 Uniprot:F1NM08
Length = 595
Score = 178 (67.7 bits), Expect = 1.7e-10, P = 1.7e-10
Identities = 51/149 (34%), Positives = 73/149 (48%)
Query: 3 VPLEQKLDMLWSFIKAHLNSKILVFLTSCKQVKYVFEAFKKLRPGIPLMCLYGRMKQDRR 62
V + KL L I + +K +VF+ + ++ + K R G P M ++G Q R
Sbjct: 311 VEKDDKLIRLMEEIMSEKENKTIVFVETKRRCDDLTR--KMRRDGWPAMGIHGDKSQQER 368
Query: 63 MAIYAQFCE-KRSVLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYNSGG 121
+ +F K +L TDVASRGLD V +V+ D P YIHR+GRTAR G
Sbjct: 369 DWVLNEFKHGKAPILIATDVASRGLDVED-VKFVINYDYPNSSEDYIHRIGRTARSTKTG 427
Query: 122 RSVLFLTPTEMK----MLEKLREAKIPIH 146
+ F TP +K ++ LREA I+
Sbjct: 428 TAYTFFTPNNIKQVNDLISVLREANQAIN 456
>UNIPROTKB|F1NXI3 [details] [associations]
symbol:DDX5 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003724 "RNA helicase activity" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0000381 "regulation of alternative mRNA splicing,
via spliceosome" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0003713 "transcription coactivator
activity" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0007623 "circadian rhythm" evidence=IEA] [GO:0030331 "estrogen
receptor binding" evidence=IEA] [GO:0033148 "positive regulation of
intracellular estrogen receptor signaling pathway" evidence=IEA]
[GO:0036002 "pre-mRNA binding" evidence=IEA] [GO:0043517 "positive
regulation of DNA damage response, signal transduction by p53 class
mediator" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0050681 "androgen receptor binding" evidence=IEA] [GO:0060765
"regulation of androgen receptor signaling pathway" evidence=IEA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0072332 "intrinsic apoptotic signaling pathway by p53 class
mediator" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271
Pfam:PF08061 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005730 GO:GO:0045944 GO:GO:0000122
GO:GO:0003713 GO:GO:0033148 GO:GO:0043517 GO:GO:0060765
GO:GO:0072332 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0000381 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0036002 OMA:IDAMSGY
GeneTree:ENSGT00660000095174 EMBL:AADN02030017 IPI:IPI00598253
ProteinModelPortal:F1NXI3 Ensembl:ENSGALT00000034644
ArrayExpress:F1NXI3 Uniprot:F1NXI3
Length = 603
Score = 178 (67.7 bits), Expect = 1.7e-10, P = 1.7e-10
Identities = 51/149 (34%), Positives = 73/149 (48%)
Query: 3 VPLEQKLDMLWSFIKAHLNSKILVFLTSCKQVKYVFEAFKKLRPGIPLMCLYGRMKQDRR 62
V + KL L I + +K +VF+ + ++ + K R G P M ++G Q R
Sbjct: 319 VEKDDKLIRLMEEIMSEKENKTIVFVETKRRCDDLTR--KMRRDGWPAMGIHGDKSQQER 376
Query: 63 MAIYAQFCE-KRSVLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYNSGG 121
+ +F K +L TDVASRGLD V +V+ D P YIHR+GRTAR G
Sbjct: 377 DWVLNEFKHGKAPILIATDVASRGLDVED-VKFVINYDYPNSSEDYIHRIGRTARSTKTG 435
Query: 122 RSVLFLTPTEMK----MLEKLREAKIPIH 146
+ F TP +K ++ LREA I+
Sbjct: 436 TAYTFFTPNNIKQVNDLISVLREANQAIN 464
>SGD|S000001894 [details] [associations]
symbol:SPB4 "Putative ATP-dependent RNA helicase"
species:4932 "Saccharomyces cerevisiae" [GO:0000027 "ribosomal
large subunit assembly" evidence=IMP] [GO:0030686 "90S preribosome"
evidence=IDA;IPI] [GO:0042254 "ribosome biogenesis" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA;IDA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0000470 "maturation of LSU-rRNA" evidence=IMP]
[GO:0005654 "nucleoplasm" evidence=IDA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 SGD:S000001894
GO:GO:0005524 GO:GO:0005730 EMBL:D50617 EMBL:BK006940 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0030686
GO:GO:0006364 GO:GO:0004004 GO:GO:0000027 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313 Pfam:PF13959
HOGENOM:HOG000268803 KO:K14809 GeneTree:ENSGT00550000074969
OMA:MDSSANI OrthoDB:EOG46MFT3 EMBL:X16147 PIR:S14942
RefSeq:NP_116654.1 ProteinModelPortal:P25808 SMR:P25808
DIP:DIP-5423N IntAct:P25808 MINT:MINT-525740 STRING:P25808
PaxDb:P25808 EnsemblFungi:YFL002C GeneID:850549 KEGG:sce:YFL002C
CYGD:YFL002c NextBio:966324 Genevestigator:P25808
GermOnline:YFL002C Uniprot:P25808
Length = 606
Score = 177 (67.4 bits), Expect = 2.3e-10, P = 2.3e-10
Identities = 77/323 (23%), Positives = 143/323 (44%)
Query: 2 IVPLEQKLDMLWSFIKAHLNSKILVFLTSCKQVKYVFEAFKKLRPG------IPLMCLYG 55
+V +KL +L S + + K +V+ +C V Y + + L + + L+G
Sbjct: 242 VVNPAEKLQLLVSILNNYKFKKCIVYFPTCVSVSYFYSFIQYLGKRNILVNEVEIFSLHG 301
Query: 56 RMKQDRRMAIYAQFCEK--RSVLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGR 113
+++ R F + SVLF TDVA+RG+D VD V+Q+D P + ++HR GR
Sbjct: 302 KLQTSARTKTLTAFTDSLSNSVLFTTDVAARGIDIPD-VDLVIQLDPPTNTDMFMHRCGR 360
Query: 114 TARYNSGGRSVLFLTP-TEMKMLEKLREAKIPIHFTKANTKRLQP-VSGLLAALLVKYPD 171
T R N G+++ FL E + ++ + + K + +++ D
Sbjct: 361 TGRANRVGKAITFLNEGREEDFIPFMQVKNVELEELDLEVKGITTNFYEDFRNWILEDRD 420
Query: 172 MQHRAQKAFITYLRSVHIQKDKEVFDVTKLSIDEFSASLGL---PMTPKI-RFLNQKK-- 225
+ KA++ +++ +F + L + GL P P+I ++L +K
Sbjct: 421 RFDKGVKAYVAFIKYYSNHSATSIFRLQSLDYVGIAKLYGLFRLPRMPEITKYLATEKQE 480
Query: 226 ----GKMVPVKPV-LDNAEKEDKLMISREKLLPDNFTEENVDRDILETKDIEDE-GKADL 279
G + PV +D + +DK REK + T +N+ I + K ++ E K +L
Sbjct: 481 GIFPGNWLVDPPVNMDEYKYKDK---KREKERQE--TLKNISL-INDKKKLKSELKKKNL 534
Query: 280 LEDVMRATRVKK-NKKLKINVHR 301
T+ +K +K K+++ R
Sbjct: 535 AWSDKTLTKERKLERKEKMSLKR 557
>FB|FBgn0027602 [details] [associations]
symbol:CG8611 species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:AE014298
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
InterPro:IPR025313 Pfam:PF13959 KO:K14806
GeneTree:ENSGT00550000075041 EMBL:AF145609 RefSeq:NP_573214.1
RefSeq:NP_788922.1 UniGene:Dm.3172 ProteinModelPortal:Q86B47
SMR:Q86B47 IntAct:Q86B47 MINT:MINT-776497 PaxDb:Q86B47 PRIDE:Q86B47
EnsemblMetazoa:FBtr0074440 GeneID:32725 KEGG:dme:Dmel_CG8611
UCSC:CG8611-RB FlyBase:FBgn0027602 InParanoid:Q86B47 OMA:YTERDPE
OrthoDB:EOG47SQVT PhylomeDB:Q86B47 GenomeRNAi:32725 NextBio:780053
Bgee:Q86B47 Uniprot:Q86B47
Length = 975
Score = 179 (68.1 bits), Expect = 2.8e-10, P = 2.8e-10
Identities = 42/103 (40%), Positives = 58/103 (56%)
Query: 44 LRPGIPLMCLYGRMKQDRRMAIYAQFCEKRS-VLFCTDVASRGLDFNKAVDWVVQVDCPE 102
L G+ L+G M Q R ++ F + S VL TDV RG+D + VVQ P+
Sbjct: 675 LLQGLRFFKLHGSMTQTERQGVFRGFRDCASCVLLATDVVGRGIDVPD-IKLVVQYTPPQ 733
Query: 103 DVASYIHRVGRTARYNSGGRSVLFLTPTEMKMLEKLREAKIPI 145
A ++HRVGRTAR GR+VLFLTP+E + + L + +I I
Sbjct: 734 TTADFVHRVGRTARAGRKGRAVLFLTPSEAQFVRHLEKKRIRI 776
>TIGR_CMR|SO_4034 [details] [associations]
symbol:SO_4034 "ATP-dependent RNA helicase DeaD"
species:211586 "Shewanella oneidensis MR-1" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0009631 "cold
acclimation" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:AE014299 GenomeReviews:AE014299_GR InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268810 KO:K05592 InterPro:IPR005580
Pfam:PF03880 HSSP:P10081 OMA:LPQGMPK RefSeq:NP_719564.1
ProteinModelPortal:Q8EA75 GeneID:1171660 KEGG:son:SO_4034
PATRIC:23527732 ProtClustDB:CLSK907463 Uniprot:Q8EA75
Length = 623
Score = 176 (67.0 bits), Expect = 3.1e-10, P = 3.1e-10
Identities = 48/143 (33%), Positives = 69/143 (48%)
Query: 3 VPLEQKLDMLWSFIKAHLNSKILVFL---TSCKQVKYVFEAFKKLRPGIPLMCLYGRMKQ 59
V KL+ L ++ I++F+ SC ++ EA G L+G M Q
Sbjct: 226 VSQHNKLEALVRVLEVENTEGIIIFVRTRNSCVELAEKLEA-----RGYASSPLHGDMNQ 280
Query: 60 DRRMAIYAQFCE-KRSVLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYN 118
R Q K +L TDVA+RGLD + + VV D P D +Y+HR+GRT R
Sbjct: 281 QARERAVEQLKNGKLDILIATDVAARGLDVER-IGHVVNYDIPYDTEAYVHRIGRTGRAG 339
Query: 119 SGGRSVLFLTPTEMKMLEKLREA 141
G ++LF+T EM+ML + A
Sbjct: 340 RTGMAILFVTSREMRMLRTIERA 362
>GENEDB_PFALCIPARUM|MAL7P1.113 [details] [associations]
symbol:MAL7P1.113 "DEAD box helicase,
putative" species:5833 "Plasmodium falciparum" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0003723
"RNA binding" evidence=ISS] [GO:0016070 "RNA metabolic process"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
EMBL:AL844506 InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083
InterPro:IPR025313 Pfam:PF13959 KO:K01509 RefSeq:XP_001349115.1
ProteinModelPortal:Q8IBN8 EnsemblProtists:MAL7P1.113:mRNA
GeneID:2654935 KEGG:pfa:MAL7P1.113 EuPathDB:PlasmoDB:PF3D7_0721300
OMA:NDSHNEL ProtClustDB:CLSZ2514714 Uniprot:Q8IBN8
Length = 899
Score = 176 (67.0 bits), Expect = 3.5e-10, Sum P(2) = 3.5e-10
Identities = 36/106 (33%), Positives = 61/106 (57%)
Query: 48 IPLMCLYGRMKQDRRMAIYAQFCE-KRSVLFCTDVASRGLDFNKAVDWVVQVDCPEDVAS 106
+ + L+G + ++ R+ + F + S+L CTD+ SRG+ F+ ++ V+Q D P+ +
Sbjct: 669 VNIYILHGNLSKEDRLGNFMDFSKTNNSILLCTDIISRGIHFD-SLSVVIQYDPPQILEE 727
Query: 107 YIHRVGRTARYNSGGRSVLFLTPTEMKMLEKLREAKIPIHFTKANT 152
YIH+VGRTAR N G + LFL ++ + L L+ I + NT
Sbjct: 728 YIHKVGRTARLNKQGSAYLFLLKSQKQFLNILKNKNIQLKIILGNT 773
Score = 47 (21.6 bits), Expect = 3.5e-10, Sum P(2) = 3.5e-10
Identities = 15/80 (18%), Positives = 38/80 (47%)
Query: 172 MQHRAQKAFITYLRSVH-IQKD-KEVFDVTKLSIDEFSASLGLPMTPKIRFLNQKKGKMV 229
+ + AF+ + S + K+ + +F+ + + + + L TPK +K+ +
Sbjct: 812 LMEKGTSAFLCTITSFYSTSKNLRSIFNAKDIHLGHLAYTFLLEKTPKQISKYKKEQNYI 871
Query: 230 PVKPVLDNAEKEDKLMISRE 249
+K ++KE +L+ S++
Sbjct: 872 NIKKQTVLSKKEKRLLKSKQ 891
>UNIPROTKB|Q8IBN8 [details] [associations]
symbol:MAL7P1.113 "DEAD box helicase, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0003723 "RNA binding"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
EMBL:AL844506 InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083
InterPro:IPR025313 Pfam:PF13959 KO:K01509 RefSeq:XP_001349115.1
ProteinModelPortal:Q8IBN8 EnsemblProtists:MAL7P1.113:mRNA
GeneID:2654935 KEGG:pfa:MAL7P1.113 EuPathDB:PlasmoDB:PF3D7_0721300
OMA:NDSHNEL ProtClustDB:CLSZ2514714 Uniprot:Q8IBN8
Length = 899
Score = 176 (67.0 bits), Expect = 3.5e-10, Sum P(2) = 3.5e-10
Identities = 36/106 (33%), Positives = 61/106 (57%)
Query: 48 IPLMCLYGRMKQDRRMAIYAQFCE-KRSVLFCTDVASRGLDFNKAVDWVVQVDCPEDVAS 106
+ + L+G + ++ R+ + F + S+L CTD+ SRG+ F+ ++ V+Q D P+ +
Sbjct: 669 VNIYILHGNLSKEDRLGNFMDFSKTNNSILLCTDIISRGIHFD-SLSVVIQYDPPQILEE 727
Query: 107 YIHRVGRTARYNSGGRSVLFLTPTEMKMLEKLREAKIPIHFTKANT 152
YIH+VGRTAR N G + LFL ++ + L L+ I + NT
Sbjct: 728 YIHKVGRTARLNKQGSAYLFLLKSQKQFLNILKNKNIQLKIILGNT 773
Score = 47 (21.6 bits), Expect = 3.5e-10, Sum P(2) = 3.5e-10
Identities = 15/80 (18%), Positives = 38/80 (47%)
Query: 172 MQHRAQKAFITYLRSVH-IQKD-KEVFDVTKLSIDEFSASLGLPMTPKIRFLNQKKGKMV 229
+ + AF+ + S + K+ + +F+ + + + + L TPK +K+ +
Sbjct: 812 LMEKGTSAFLCTITSFYSTSKNLRSIFNAKDIHLGHLAYTFLLEKTPKQISKYKKEQNYI 871
Query: 230 PVKPVLDNAEKEDKLMISRE 249
+K ++KE +L+ S++
Sbjct: 872 NIKKQTVLSKKEKRLLKSKQ 891
>ASPGD|ASPL0000013201 [details] [associations]
symbol:AN4233 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0003723 EMBL:BN001302
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0008026 EMBL:AACD01000068 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268802 KO:K14777 OMA:IFIPSKF
RefSeq:XP_661837.1 ProteinModelPortal:Q5B5E7 SMR:Q5B5E7
STRING:Q5B5E7 EnsemblFungi:CADANIAT00004427 GeneID:2873652
KEGG:ani:AN4233.2 OrthoDB:EOG4ZPJ3P Uniprot:Q5B5E7
Length = 465
Score = 173 (66.0 bits), Expect = 3.9e-10, P = 3.9e-10
Identities = 46/146 (31%), Positives = 75/146 (51%)
Query: 3 VPLEQKLDMLWSFIKAHLNSKILVFLTSCKQVKYVFEAFKKLRPGIPLMCLYGRMKQDRR 62
+P + K L + ++F T+ + + V AF G + L+G++ Q R
Sbjct: 267 IPHKHKNLYLVYLLNEFAGQSAIIFTTTVHETQRV--AFMLRALGFGAIPLHGQLSQSAR 324
Query: 63 MAIYAQFCEK-RSVLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYNSGG 121
+ +F + R +L TDVA+RGLD +VD V D P D +YIHRVGRTAR G
Sbjct: 325 LGALGKFRSRSRDILVATDVAARGLDI-PSVDVVFNFDLPMDSKTYIHRVGRTARAGKSG 383
Query: 122 RSVLFLTPTEMKMLEKLREA---KIP 144
++ F+T ++++ ++ A K+P
Sbjct: 384 VAISFVTQYDVEVWLRIEHALSKKLP 409
>UNIPROTKB|P0A9P6 [details] [associations]
symbol:deaD "DeaD, DEAD-box RNA helicase" species:83333
"Escherichia coli K-12" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0030684 "preribosome" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0000027 "ribosomal large
subunit assembly" evidence=IMP] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=IDA] [GO:0006401 "RNA catabolic
process" evidence=IGI] [GO:0003724 "RNA helicase activity"
evidence=IDA] [GO:0070417 "cellular response to cold"
evidence=IEP;IMP] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR021046 Pfam:PF00270 Pfam:PF00271 Pfam:PF12343
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR EMBL:U18997 GO:GO:0003723 GO:GO:0006401
GO:GO:0070417 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 GO:GO:0000027 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268810 KO:K05592 InterPro:IPR005580
Pfam:PF03880 EMBL:M63288 EMBL:U03750 PIR:F65106 RefSeq:NP_417631.2
RefSeq:YP_491349.1 ProteinModelPortal:P0A9P6 SMR:P0A9P6
DIP:DIP-35752N IntAct:P0A9P6 MINT:MINT-1219396 SWISS-2DPAGE:P0A9P6
PaxDb:P0A9P6 PRIDE:P0A9P6 EnsemblBacteria:EBESCT00000000679
EnsemblBacteria:EBESCT00000014242 GeneID:12933435 GeneID:947674
KEGG:ecj:Y75_p3084 KEGG:eco:b3162 PATRIC:32121742 EchoBASE:EB0211
EcoGene:EG10215 OMA:ILFMTPR ProtClustDB:PRK11634
BioCyc:EcoCyc:EG10215-MONOMER BioCyc:ECOL316407:JW5531-MONOMER
Genevestigator:P0A9P6 GO:GO:0030684 Uniprot:P0A9P6
Length = 629
Score = 175 (66.7 bits), Expect = 4.0e-10, P = 4.0e-10
Identities = 72/270 (26%), Positives = 122/270 (45%)
Query: 7 QKLDMLWSFIKAHLNSKILVFLTSCKQVKYVFEAFKKLRPGIPLMCLYGRMKQDRRMAIY 66
+K + L F++A ++F+ + V EA + R G L G M Q R
Sbjct: 231 RKNEALVRFLEAEDFDAAIIFVRTKNATLEVAEALE--RNGYNSAALNGDMNQALREQTL 288
Query: 67 AQFCEKR-SVLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYNSGGRSVL 125
+ + R +L TDVA+RGLD + + VV D P D SY+HR+GRT R GR++L
Sbjct: 289 ERLKDGRLDILIATDVAARGLDVER-ISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALL 347
Query: 126 FLTPTEMKMLEKL-REAKIPIHFTKANTKRLQPVSGLLAALLVKYP-DMQHRAQKAFITY 183
F+ E ++L + R K+ I + L L L K+ +Q + + + +
Sbjct: 348 FVENRERRLLRNIERTMKLTIPEVELPNAEL-----LGKRRLEKFAAKVQQQLESSDLDQ 402
Query: 184 LRSVHIQKDKEVFDVTKLSIDEFSASLGLPMTPKIRFLNQKKGKMVPVKPVLDNAEKEDK 243
R++ + K + + +L ++ +A+L L M R L P++P + +++D+
Sbjct: 403 YRAL-LSKIQPTAEGEELDLETLAAAL-LKMAQGERTLIVPPD--APMRPKREFRDRDDR 458
Query: 244 LMISREKLLPDNFTEENVDRDILETKDIED 273
R P E DR E +D+ D
Sbjct: 459 GPRDRNDRGPRGDRE---DRPRRERRDVGD 485
>UNIPROTKB|Q65N62 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:279010 "Bacillus licheniformis DSM 13 = ATCC 14580"
[GO:0003723 "RNA binding" evidence=ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] [GO:0005524 "ATP binding"
evidence=ISS] [GO:0043590 "bacterial nucleoid" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005737 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043590
HOGENOM:HOG000268810 OMA:IIDHINR HSSP:Q58083 EMBL:AE017333
EMBL:CP000002 RefSeq:YP_006711973.1 RefSeq:YP_077785.1
ProteinModelPortal:Q65N62 STRING:Q65N62 DNASU:3098967
EnsemblBacteria:EBBACT00000055567 EnsemblBacteria:EBBACT00000059427
GeneID:3030407 GeneID:3098967 GenomeReviews:AE017333_GR
GenomeReviews:CP000002_GR KEGG:bld:BLi00546 KEGG:bli:BL02197
PATRIC:18946609 ProtClustDB:CLSK886742
BioCyc:BLIC279010:GJ2P-538-MONOMER Uniprot:Q65N62
Length = 487
Score = 173 (66.0 bits), Expect = 4.3e-10, P = 4.3e-10
Identities = 46/135 (34%), Positives = 69/135 (51%)
Query: 7 QKLDMLWSFIKAHLNSKILVFLTSCKQVKYVFEAFKKLRPGIPLMCLYGRMKQDRRMAIY 66
+K D L + +VF + ++V + EA LR G ++G + Q +RM
Sbjct: 227 KKFDTLTRLLDIQSPELAIVFGRTKRRVDELTEALN-LR-GYTAEGIHGDLTQAKRMVAL 284
Query: 67 AQFCEKR-SVLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYNSGGRSVL 125
+F + VL TDVA+RGLD + V V D P+D SY+HR+GRT R G ++
Sbjct: 285 RKFKQGAIEVLVATDVAARGLDIS-GVTHVYNFDVPQDPESYVHRIGRTGRAGKTGMAMT 343
Query: 126 FLTPTEMKMLEKLRE 140
F+TP E ML + +
Sbjct: 344 FITPREKDMLRAIEQ 358
>ZFIN|ZDB-GENE-061013-64 [details] [associations]
symbol:ddx28 "DEAD (Asp-Glu-Ala-Asp) box polypeptide
28" species:7955 "Danio rerio" [GO:0004386 "helicase activity"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
ZFIN:ZDB-GENE-061013-64 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 CTD:55794
HOGENOM:HOG000008689 HOVERGEN:HBG081424 OrthoDB:EOG42RD7H
EMBL:BC124668 IPI:IPI00805270 RefSeq:NP_001070800.1
UniGene:Dr.84136 ProteinModelPortal:Q08BL1 GeneID:768189
KEGG:dre:768189 InParanoid:Q08BL1 NextBio:20918504
ArrayExpress:Q08BL1 Uniprot:Q08BL1
Length = 558
Score = 173 (66.0 bits), Expect = 5.5e-10, P = 5.5e-10
Identities = 46/138 (33%), Positives = 74/138 (53%)
Query: 9 LDMLWSFIKAHLNSK-ILVFLTSCKQVKYVFEAFKKLRPGIPLMCLYGRMKQDRRMAIYA 67
L++ + +A K +LVF S V ++ + +++ G+ M L G M R ++
Sbjct: 398 LELHQALKRAEQEQKGVLVFCNSASTVNWLGYSLEEM--GVGHMRLQGEMPAAMREGVFR 455
Query: 68 QFCE-KRSVLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARY--NSGGRSV 124
F K +VL CTD+ASRGLD + V +V D PE YIHR GR R + GG +
Sbjct: 456 DFQRGKTNVLVCTDIASRGLDTQR-VGLIVNYDFPESQTDYIHRAGRVGRAGGSEGGEVL 514
Query: 125 LFLT-PTEMKMLEKLREA 141
F+T P ++++++K+ A
Sbjct: 515 SFVTQPWDVELVQKIETA 532
>UNIPROTKB|F1N0P2 [details] [associations]
symbol:DDX49 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00670000098028 EMBL:DAAA02019036 IPI:IPI00709252
UniGene:Bt.61505 Ensembl:ENSBTAT00000056136 OMA:PLEPKEY
Uniprot:F1N0P2
Length = 392
Score = 170 (64.9 bits), Expect = 5.9e-10, P = 5.9e-10
Identities = 45/145 (31%), Positives = 74/145 (51%)
Query: 1 MIVPLEQK----LDMLWSFIKAHLNSKILVFLTSCKQVKYVFEAFKKLRPGIPLMCLYGR 56
++VP + K + ++ +F H + I++F +CK + + +K P + L+
Sbjct: 133 LLVPEKVKDAYLVHLIQNFQDEHEDWSIIIFTNTCKTCQILCMMLRKFN--FPTVALHSM 190
Query: 57 MKQDRRMAIYAQFCEK-RSVLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTA 115
MKQ R A A+F +L TDVASRGLD V V+ + P YIHRVGRTA
Sbjct: 191 MKQKERFAALAKFKSSIYRILIATDVASRGLDI-PTVQVVINHNTPGLPKIYIHRVGRTA 249
Query: 116 RYNSGGRSVLFLTPTEMKMLEKLRE 140
R G+++ +T ++ ++ + E
Sbjct: 250 RAGRQGQAITLVTQYDIHLVHAIEE 274
>ASPGD|ASPL0000056064 [details] [associations]
symbol:AN0204 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005730
"nucleolus" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
EMBL:BN001308 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 EMBL:AACD01000005
InterPro:IPR025313 Pfam:PF13959 KO:K14806 RefSeq:XP_657808.1
ProteinModelPortal:Q5BGX6 STRING:Q5BGX6
EnsemblFungi:CADANIAT00002528 GeneID:2875981 KEGG:ani:AN0204.2
HOGENOM:HOG000268799 OMA:RAYATHI OrthoDB:EOG4W6S47 Uniprot:Q5BGX6
Length = 778
Score = 174 (66.3 bits), Expect = 6.1e-10, Sum P(3) = 6.1e-10
Identities = 55/195 (28%), Positives = 96/195 (49%)
Query: 40 AFKKLRPGIPLMCLYGRMKQDRRMAIYAQFCEKR--SVLFCTDVASRGLDFNKAVDWVVQ 97
AF + + L+G + Q R + + F + R SVL CTDVASRGLD VD VV+
Sbjct: 506 AFSNSSNAVTMYKLHGSLPQHVRTSTLSSFAKNRDPSVLICTDVASRGLDLPN-VDLVVE 564
Query: 98 VDCPEDVASYIHRVGRTARYNSGGRSVLFLTP-TEMKMLEKLREAKIP--IHFTKANTKR 154
D ++HR+GRTAR GR+++FL P E +E L+ T++ T
Sbjct: 565 YDPAFSADEHLHRIGRTARLGRDGRALVFLLPGCEENYVEILKRGYRDGGKALTRSTTDD 624
Query: 155 L--QPVSGLLAAL-----LVKY----PDMQHRAQKAFITYLRS--VHIQKDKEVFDVTKL 201
+ + G + + L ++ P+ A++A+ +++R+ H+ ++ +F++ +L
Sbjct: 625 ILKRGFGGNIESQKWQLELERWALDNPEYLEMARRAYQSHIRAYATHVANERHIFNIKEL 684
Query: 202 SIDEFSASLGLPMTP 216
+ + S L P
Sbjct: 685 HLGHLAKSFALRDRP 699
Score = 45 (20.9 bits), Expect = 6.1e-10, Sum P(3) = 6.1e-10
Identities = 9/27 (33%), Positives = 15/27 (55%)
Query: 402 GRRKKAKIYFDSDSDNDNDERKQNKDD 428
G+++KA Y D+D+D+R D
Sbjct: 727 GKKRKATGYGGGRDDDDDDDRPSATTD 753
Score = 39 (18.8 bits), Expect = 6.1e-10, Sum P(3) = 6.1e-10
Identities = 9/32 (28%), Positives = 18/32 (56%)
Query: 14 SFIKAHLNSKILVFLTSCKQVKYVFEAF-KKL 44
+F++ K ++F++ V + FE F +KL
Sbjct: 435 TFMRKGSVMKAIIFVSCADSVNFHFEVFTRKL 466
>FB|FBgn0003261 [details] [associations]
symbol:Rm62 "Rm62" species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS;NAS]
[GO:0003729 "mRNA binding" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0016246 "RNA interference" evidence=IMP]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000381 "regulation of alternative mRNA
splicing, via spliceosome" evidence=IMP] [GO:0005634 "nucleus"
evidence=IC;IDA] [GO:0019730 "antimicrobial humoral response"
evidence=IMP] [GO:0005703 "polytene chromosome puff" evidence=IDA]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0071011 "precatalytic spliceosome" evidence=IDA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC] [GO:0005700 "polytene
chromosome" evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 EMBL:AE014297 GO:GO:0005524 GO:GO:0005875
GO:GO:0006417 GO:GO:0016246 GO:GO:0022008 GO:GO:0003729
GO:GO:0019730 GO:GO:0071011 GO:GO:0000398 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0005703 GO:GO:0000381 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K12823 GeneTree:ENSGT00660000095174 EMBL:X52846
EMBL:BT001716 EMBL:BT011476 EMBL:BT015209 PIR:S11485
RefSeq:NP_001163528.1 RefSeq:NP_001189182.1 RefSeq:NP_524243.2
RefSeq:NP_731031.1 RefSeq:NP_731032.1 RefSeq:NP_731033.1
RefSeq:NP_731034.1 RefSeq:NP_731035.2 UniGene:Dm.1520
ProteinModelPortal:P19109 SMR:P19109 DIP:DIP-17867N IntAct:P19109
MINT:MINT-301207 STRING:P19109 PaxDb:P19109 PRIDE:P19109
EnsemblMetazoa:FBtr0078652 GeneID:40739 KEGG:dme:Dmel_CG10279
CTD:40739 FlyBase:FBgn0003261 InParanoid:P19109 OMA:HISNQPR
OrthoDB:EOG4QBZMP PhylomeDB:P19109 GenomeRNAi:40739 NextBio:820339
Bgee:P19109 GermOnline:CG10279 Uniprot:P19109
Length = 719
Score = 174 (66.3 bits), Expect = 6.4e-10, P = 6.4e-10
Identities = 50/156 (32%), Positives = 79/156 (50%)
Query: 6 EQKLDMLWSFIKAHLNS--KILVFLTSCKQVKYVFEAFKKLRPGIPLMCLYGRMKQDRRM 63
E+KL L S I S KI++F+ + ++V + + G+ ++G Q R
Sbjct: 513 EEKLKTLLSDIYDTSESPGKIIIFVETKRRVDNLVRFIRSF--GVRCGAIHGDKSQSERD 570
Query: 64 AIYAQFCE-KRSVLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYNSGGR 122
+ +F K ++L TDVA+RGLD + + +V+ D P++ YIHR+GRT R N+ G
Sbjct: 571 FVLREFRSGKSNILVATDVAARGLDVD-GIKYVINFDYPQNSEDYIHRIGRTGRSNTKGT 629
Query: 123 SVLFLTPTEMK----MLEKLREAKIPIHFTKANTKR 154
S F T K +++ LREA I+ N R
Sbjct: 630 SFAFFTKNNAKQAKALVDVLREANQEINPALENLAR 665
>UNIPROTKB|A8MTP9 [details] [associations]
symbol:DDX52 "Probable ATP-dependent RNA helicase DDX52"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000242486
HOVERGEN:HBG051332 EMBL:AC091199 HGNC:HGNC:20038
PharmGKB:PA134904836 ChiTaRS:DDX52 NextBio:42007 IPI:IPI00394982
ProteinModelPortal:A8MTP9 SMR:A8MTP9 STRING:A8MTP9 PRIDE:A8MTP9
Ensembl:ENST00000394367 ArrayExpress:A8MTP9 Bgee:A8MTP9
Uniprot:A8MTP9
Length = 491
Score = 171 (65.3 bits), Expect = 7.3e-10, P = 7.3e-10
Identities = 46/154 (29%), Positives = 78/154 (50%)
Query: 8 KLDMLWSFIKAHLNSKILVFLTSCKQVKYVFEAFKKLRPGIPLMCLYG-RMKQDRRMAIY 66
KL + +K N +LVF+ S ++ K +F + GI + ++ R +Q R ++
Sbjct: 291 KLLAMRELVKKGFNPPVLVFVQSIERAKELFHEL--IYEGINVDVIHAERTQQQRDNTVH 348
Query: 67 AQFCEKRSVLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYNSGGRSVLF 126
+ K VL CT + +RG+DF K V+ V+ D P YIHR+GRT R + G+++ F
Sbjct: 349 SFRAGKIWVLICTALLARGIDF-KGVNLVINYDFPTSSVEYIHRIGRTGRAGNKGKAITF 407
Query: 127 LTPTEMKMLEK----LREAKIPI-HFTKANTKRL 155
T + +L +++A P+ + K K L
Sbjct: 408 FTEDDKPLLRSVANVIQQAGCPVPEYIKGFQKLL 441
>CGD|CAL0000117 [details] [associations]
symbol:DBP7 species:5476 "Candida albicans" [GO:0005730
"nucleolus" evidence=IEA] [GO:0000463 "maturation of LSU-rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
CGD:CAL0000117 GO:GO:0005524 GO:GO:0005730 GO:GO:0003723
EMBL:AP006852 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 InterPro:IPR025313 Pfam:PF13959 EMBL:AACQ01000156
RefSeq:XP_712474.1 RefSeq:XP_888745.1 ProteinModelPortal:Q59S50
STRING:Q59S50 GeneID:3645903 GeneID:3704147 KEGG:cal:CaO19.6902
KEGG:cal:CaO19_6902 KO:K14806 Uniprot:Q59S50
Length = 727
Score = 147 (56.8 bits), Expect = 7.8e-10, Sum P(3) = 7.8e-10
Identities = 31/81 (38%), Positives = 47/81 (58%)
Query: 53 LYGRMKQDRRMAIYAQFCEKRS----VLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYI 108
L+G + Q R + F + + +LFCTDVASRGLD + V++ D P + ++
Sbjct: 487 LHGSLSQQTRASTLQSFVKDNNSYNKILFCTDVASRGLDLPNVAN-VIEYDPPFTIDDHL 545
Query: 109 HRVGRTARYNSGGRSVLFLTP 129
HR+GR+AR + G + LFL P
Sbjct: 546 HRIGRSARLGNEGNATLFLLP 566
Score = 70 (29.7 bits), Expect = 7.8e-10, Sum P(3) = 7.8e-10
Identities = 15/44 (34%), Positives = 26/44 (59%)
Query: 176 AQKAFITYLRS--VHIQKDKEVFDVTKLSIDEFSASLGLPMTPK 217
A +AF +++R+ H+ ++E F+V L + + S GL TPK
Sbjct: 640 AVRAFTSHIRAYATHLSSEREFFNVKLLHLGHLAKSFGLRETPK 683
Score = 42 (19.8 bits), Expect = 7.8e-10, Sum P(3) = 7.8e-10
Identities = 10/35 (28%), Positives = 16/35 (45%)
Query: 9 LDMLWSFIKAHLNSKILVFLTSCKQVKYVFEAFKK 43
LD L I H + +VF + V + F+ F +
Sbjct: 407 LDALLLKISKHSAERTIVFFSCSDSVDFHFDVFTR 441
>RGD|621743 [details] [associations]
symbol:Ddx52 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 52"
species:10116 "Rattus norvegicus" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0003724 "RNA helicase activity" evidence=NAS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=TAS]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 RGD:621743
GO:GO:0005524 GO:GO:0005730 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026
eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
CTD:11056 GeneTree:ENSGT00550000074863 HOGENOM:HOG000242486
HOVERGEN:HBG051332 KO:K14779 OMA:NVMKQSG OrthoDB:EOG4XKV6Q
EMBL:AB055628 IPI:IPI00201365 RefSeq:NP_445977.1 UniGene:Rn.18605
ProteinModelPortal:Q99PT0 SMR:Q99PT0 PRIDE:Q99PT0
Ensembl:ENSRNOT00000003600 GeneID:85432 KEGG:rno:85432
InParanoid:Q99PT0 NextBio:617542 Genevestigator:Q99PT0
GermOnline:ENSRNOG00000002612 Uniprot:Q99PT0
Length = 598
Score = 172 (65.6 bits), Expect = 8.0e-10, P = 8.0e-10
Identities = 47/154 (30%), Positives = 78/154 (50%)
Query: 8 KLDMLWSFIKAHLNSKILVFLTSCKQVKYVFEAFKKLRPGIPLMCLYG-RMKQDRRMAIY 66
KL + +K N +LVF+ S ++ K +F + GI + ++ R +Q R ++
Sbjct: 400 KLLAMRELVKKGFNPPVLVFVQSIERAKELFHEL--IYEGINVDVIHAERTQQQRDNTVH 457
Query: 67 AQFCEKRSVLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYNSGGRSVLF 126
+ K VL CT + +RG+DF K V+ V+ D P YIHR+GRT R + G++V F
Sbjct: 458 SFRAGKIWVLICTALLARGIDF-KGVNLVINYDFPTSSVEYIHRIGRTGRAGNRGKAVTF 516
Query: 127 LTPTEMKMLEK----LREAKIPI-HFTKANTKRL 155
T + +L +++A P+ + K K L
Sbjct: 517 FTEDDKPLLRSVANVIQQAGCPVPEYIKGFQKLL 550
>POMBASE|SPAC823.08c [details] [associations]
symbol:SPAC823.08c "ATP-dependent RNA helicase Rrp3
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=ISS] [GO:0005829 "cytosol" evidence=IDA] [GO:0006364 "rRNA
processing" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 PomBase:SPAC823.08c GO:GO:0005829
GO:GO:0005524 EMBL:CU329670 GO:GO:0005730 GenomeReviews:CU329670_GR
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268802 KO:K14777 OMA:IFIPSKF
OrthoDB:EOG4ZPJ3P RefSeq:NP_593835.1 ProteinModelPortal:Q9P6N8
SMR:Q9P6N8 STRING:Q9P6N8 EnsemblFungi:SPAC823.08c.1 GeneID:2543571
KEGG:spo:SPAC823.08c NextBio:20804578 Uniprot:Q9P6N8
Length = 465
Score = 170 (64.9 bits), Expect = 8.5e-10, P = 8.5e-10
Identities = 45/144 (31%), Positives = 72/144 (50%)
Query: 1 MIVPLEQKLDMLWSFIKAHLNSKILVFLTSCKQVKYVFEAFKKLRPGIPLMCLYGRMKQD 60
+ P + K L + + I++F + + + + L G + L+G++ Q
Sbjct: 265 LFFPFKHKDTYLVYLVNELAGNSIIIFARTVNDTQRLAILLRTL--GFSAIPLHGQLSQS 322
Query: 61 RRMAIYAQFCE-KRSVLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYNS 119
R+ +F RS L TDVA+RGLD VD V+ D P D +YIHRVGRTAR
Sbjct: 323 NRLGALNKFKSGARSTLVATDVAARGLDI-PLVDVVINYDIPTDSKAYIHRVGRTARAGR 381
Query: 120 GGRSVLFLTPTEMKMLEKLREAKI 143
G+S+ +T +++ ++ EA I
Sbjct: 382 AGKSIALVTQYDLEPFLRI-EATI 404
>CGD|CAL0000056 [details] [associations]
symbol:orf19.7546 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0000462 "maturation of SSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0008186 "RNA-dependent ATPase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0003723
EMBL:AACQ01000032 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K14777 EMBL:AR550432 RefSeq:XP_719308.1
ProteinModelPortal:Q5ACU6 SMR:Q5ACU6 STRING:Q5ACU6 GeneID:3639008
KEGG:cal:CaO19.7546 Uniprot:Q5ACU6
Length = 539
Score = 171 (65.3 bits), Expect = 8.7e-10, P = 8.7e-10
Identities = 46/148 (31%), Positives = 77/148 (52%)
Query: 1 MIVPLEQKLDMLWSFIKAHLNSKILVFLTSCKQVKYVFEAFKKLRPGIPLMCLYGRMKQD 60
M+V K +L + + I+VF + + + L G + L+G++ Q
Sbjct: 342 MLVNDGYKNTILIHLLNEFMGKSIIVFTRTVAHAQRTALLARIL--GFNAVPLHGQLSQS 399
Query: 61 RRMAIYAQF-CEKRSVLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYNS 119
+R+ +F + ++L TDVA+RGLD +VD V+ D P D +YIHRVGRTAR
Sbjct: 400 QRLGSLNKFKSNQANILVATDVAARGLDI-PSVDVVINYDIPTDSKAYIHRVGRTARAGR 458
Query: 120 GGRSVLFLTPTEMKM---LEKLREAKIP 144
G+S+ +T +++M +E + K+P
Sbjct: 459 SGKSISLITQYDLEMYLRIESVLGKKLP 486
>POMBASE|SPBC4F6.07c [details] [associations]
symbol:SPBC4F6.07c "ATP-dependent RNA helicase Mak5
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=ISS;IDA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0042254 "ribosome biogenesis" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 PomBase:SPBC4F6.07c
GO:GO:0005524 GO:GO:0005730 EMBL:CU329671 GenomeReviews:CU329671_GR
GO:GO:0042254 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006364 GO:GO:0004004 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 KO:K14805 HOGENOM:HOG000290702
OMA:VEEGYFA OrthoDB:EOG44J5S7 PIR:T40504 RefSeq:NP_596107.1
ProteinModelPortal:O74393 STRING:O74393 EnsemblFungi:SPBC4F6.07c.1
GeneID:2540874 KEGG:spo:SPBC4F6.07c NextBio:20801990 Uniprot:O74393
Length = 648
Score = 172 (65.6 bits), Expect = 9.1e-10, P = 9.1e-10
Identities = 42/136 (30%), Positives = 70/136 (51%)
Query: 4 PLEQKLDMLWSFIKAHLNSKILVFLTSCKQVKYVFEAFKKLRPGIPLMCLYGRMKQDRRM 63
P E+ L + + ++ K +VF + +K + +L+ +P L+ ++ Q +R+
Sbjct: 374 PAEKDLYLYYLIMR--YPGKTMVFANGIEDIKRITPFLNELK--VPSYPLHAQLDQKKRL 429
Query: 64 AIYAQFCEK-RSVLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYNSGGR 122
+F + VL CTDVA+RG+D +V V+ P Y+HR GRTAR N G
Sbjct: 430 QSLEKFKNNPKGVLVCTDVAARGIDI-PSVTHVIHYHVPHTADMYVHRSGRTARANEDGV 488
Query: 123 SVLFLTPTEMKMLEKL 138
S+L P E+ L++L
Sbjct: 489 SILMCGPKELSQLKRL 504
>UNIPROTKB|F1S7D9 [details] [associations]
symbol:DDX49 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 KO:K14778 OMA:EVRTVEQ
GeneTree:ENSGT00670000098028 CTD:54555 EMBL:CU640483
RefSeq:XP_003123587.1 UniGene:Ssc.79767 Ensembl:ENSSSCT00000025399
GeneID:100526038 KEGG:ssc:100526038 Uniprot:F1S7D9
Length = 483
Score = 170 (64.9 bits), Expect = 9.2e-10, P = 9.2e-10
Identities = 45/145 (31%), Positives = 74/145 (51%)
Query: 1 MIVPLEQK----LDMLWSFIKAHLNSKILVFLTSCKQVKYVFEAFKKLRPGIPLMCLYGR 56
++VP + K + ++ +F H + I++F +CK + + +K P + L+
Sbjct: 224 LLVPEKVKDAYLVHLIQNFQDEHEDWSIIIFTNTCKTCQILCMMLRKFN--FPTVALHSM 281
Query: 57 MKQDRRMAIYAQFCEK-RSVLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTA 115
MKQ R A A+F +L TDVASRGLD V V+ + P YIHRVGRTA
Sbjct: 282 MKQKERFAALAKFKSSIYRILIATDVASRGLDI-PTVQVVINHNTPGLPKIYIHRVGRTA 340
Query: 116 RYNSGGRSVLFLTPTEMKMLEKLRE 140
R G+++ +T ++ ++ + E
Sbjct: 341 RAGRQGQAITLVTQYDIHLVHAIEE 365
>UNIPROTKB|E2RBM7 [details] [associations]
symbol:DDX49 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 KO:K14778
OMA:EVRTVEQ GeneTree:ENSGT00670000098028 CTD:54555
EMBL:AAEX03012274 RefSeq:XP_541930.1 ProteinModelPortal:E2RBM7
Ensembl:ENSCAFT00000023054 GeneID:484814 KEGG:cfa:484814
NextBio:20858886 Uniprot:E2RBM7
Length = 488
Score = 170 (64.9 bits), Expect = 9.3e-10, P = 9.3e-10
Identities = 45/145 (31%), Positives = 74/145 (51%)
Query: 1 MIVPLEQK----LDMLWSFIKAHLNSKILVFLTSCKQVKYVFEAFKKLRPGIPLMCLYGR 56
++VP + K + ++ +F H + I++F +CK + + +K P + L+
Sbjct: 224 LLVPEKVKDAYLVHLIQNFQDEHEDWSIIIFTNTCKTCQILCMMLRKFN--FPTVALHSM 281
Query: 57 MKQDRRMAIYAQFCEK-RSVLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTA 115
MKQ R A A+F +L TDVASRGLD V V+ + P YIHRVGRTA
Sbjct: 282 MKQKERFAALAKFKSSIYRILIATDVASRGLDI-PTVQVVINHNTPGLPKIYIHRVGRTA 340
Query: 116 RYNSGGRSVLFLTPTEMKMLEKLRE 140
R G+++ +T ++ ++ + E
Sbjct: 341 RAGRQGQAITLVTQYDIHLVHAIEE 365
>TAIR|locus:2173517 [details] [associations]
symbol:AT5G60990 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0009220
"pyrimidine ribonucleotide biosynthetic process" evidence=RCA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0003723 EMBL:AB008269 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268802 KO:K14777 OMA:IFIPSKF
EMBL:AK117799 EMBL:BT005375 EMBL:AY088068 EMBL:AJ010462
IPI:IPI00518446 PIR:T51342 RefSeq:NP_568931.1 UniGene:At.20430
ProteinModelPortal:Q8GY84 SMR:Q8GY84 STRING:Q8GY84 PaxDb:Q8GY84
PRIDE:Q8GY84 EnsemblPlants:AT5G60990.1 GeneID:836220
KEGG:ath:AT5G60990 GeneFarm:923 TAIR:At5g60990 InParanoid:Q8GY84
PhylomeDB:Q8GY84 ProtClustDB:CLSN2690059 Genevestigator:Q8GY84
GermOnline:AT5G60990 Uniprot:Q8GY84
Length = 456
Score = 173 (66.0 bits), Expect = 9.5e-10, Sum P(2) = 9.5e-10
Identities = 43/127 (33%), Positives = 68/127 (53%)
Query: 22 SKILVFLTSCKQVKYVFEAFKKLRPGIPLMCLYGRMKQDRRMAIYAQF-CEKRSVLFCTD 80
S ++F +C +++ + L G + + G+M Q +R+ +F + ++L CTD
Sbjct: 261 STSMIFTRTCDGTRFLALVLRSL--GFRAIPISGQMTQSKRLGALNKFKAGECNILVCTD 318
Query: 81 VASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYNSGGRSVLFLTPTEMK---MLEK 137
VASRGLD +VD V+ D P + YIHRVGRTAR G + + E++ +EK
Sbjct: 319 VASRGLDI-PSVDVVINYDIPTNSKDYIHRVGRTARAGRSGVGISLVNQYELEWYIQIEK 377
Query: 138 LREAKIP 144
L K+P
Sbjct: 378 LIGKKLP 384
Score = 37 (18.1 bits), Expect = 9.5e-10, Sum P(2) = 9.5e-10
Identities = 7/23 (30%), Positives = 13/23 (56%)
Query: 405 KKAKIYFDSDSDNDNDERKQNKD 427
++++ + + D N ER NKD
Sbjct: 425 EESERFLGGNKDRGNKERGGNKD 447
>UNIPROTKB|I3LJA0 [details] [associations]
symbol:DDX52 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00550000074863 OMA:NVMKQSG
EMBL:FP565631 EMBL:FP312903 Ensembl:ENSSSCT00000024730
Uniprot:I3LJA0
Length = 507
Score = 170 (64.9 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 47/154 (30%), Positives = 77/154 (50%)
Query: 8 KLDMLWSFIKAHLNSKILVFLTSCKQVKYVFEAFKKLRPGIPLMCLYG-RMKQDRRMAIY 66
KL + +K N +LVF+ S ++ K +F + GI + ++ R +Q R ++
Sbjct: 307 KLLAMRELVKKGFNPPVLVFVQSIERAKELFHEL--IYEGINVDVIHADRTQQQRDNTVH 364
Query: 67 AQFCEKRSVLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYNSGGRSVLF 126
+ K VL CT + +RG+DF K V+ V+ D P YIHR+GRT R G++V F
Sbjct: 365 SFRAGKIWVLICTALLARGIDF-KGVNLVINYDFPTSSVEYIHRIGRTGRAGHKGKAVTF 423
Query: 127 LTPTEMKMLEK----LREAKIPI-HFTKANTKRL 155
T + +L +++A P+ + K K L
Sbjct: 424 FTEDDKPLLRSVANVIQQAGCPVPEYIKGFQKLL 457
>UNIPROTKB|Q9Y2R4 [details] [associations]
symbol:DDX52 "Probable ATP-dependent RNA helicase DDX52"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005730 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 CTD:11056 HOGENOM:HOG000242486
HOVERGEN:HBG051332 KO:K14779 OMA:NVMKQSG OrthoDB:EOG4XKV6Q
EMBL:AF077033 EMBL:AK001652 EMBL:AK093661 EMBL:AC091199
EMBL:BC041785 EMBL:AJ010840 IPI:IPI00032423 RefSeq:NP_008941.2
UniGene:Hs.590937 PDB:3DKP PDBsum:3DKP ProteinModelPortal:Q9Y2R4
SMR:Q9Y2R4 IntAct:Q9Y2R4 STRING:Q9Y2R4 PhosphoSite:Q9Y2R4
DMDM:296439375 SWISS-2DPAGE:Q9Y2R4 PaxDb:Q9Y2R4 PRIDE:Q9Y2R4
Ensembl:ENST00000349699 GeneID:11056 KEGG:hsa:11056 UCSC:uc002hoh.2
GeneCards:GC17M035969 HGNC:HGNC:20038 MIM:612500 neXtProt:NX_Q9Y2R4
PharmGKB:PA134904836 InParanoid:Q9Y2R4 PhylomeDB:Q9Y2R4
ChiTaRS:DDX52 EvolutionaryTrace:Q9Y2R4 GenomeRNAi:11056
NextBio:42007 ArrayExpress:Q9Y2R4 Bgee:Q9Y2R4 CleanEx:HS_DDX52
Genevestigator:Q9Y2R4 GermOnline:ENSG00000141141 Uniprot:Q9Y2R4
Length = 599
Score = 171 (65.3 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 46/154 (29%), Positives = 78/154 (50%)
Query: 8 KLDMLWSFIKAHLNSKILVFLTSCKQVKYVFEAFKKLRPGIPLMCLYG-RMKQDRRMAIY 66
KL + +K N +LVF+ S ++ K +F + GI + ++ R +Q R ++
Sbjct: 399 KLLAMRELVKKGFNPPVLVFVQSIERAKELFHEL--IYEGINVDVIHAERTQQQRDNTVH 456
Query: 67 AQFCEKRSVLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYNSGGRSVLF 126
+ K VL CT + +RG+DF K V+ V+ D P YIHR+GRT R + G+++ F
Sbjct: 457 SFRAGKIWVLICTALLARGIDF-KGVNLVINYDFPTSSVEYIHRIGRTGRAGNKGKAITF 515
Query: 127 LTPTEMKMLEK----LREAKIPI-HFTKANTKRL 155
T + +L +++A P+ + K K L
Sbjct: 516 FTEDDKPLLRSVANVIQQAGCPVPEYIKGFQKLL 549
>FB|FBgn0010220 [details] [associations]
symbol:Dbp45A "DEAD box protein 45A" species:7227 "Drosophila
melanogaster" [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS;NAS] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000381 "regulation of
alternative mRNA splicing, via spliceosome" evidence=IMP]
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 EMBL:AE013599
GO:GO:0005524 GO:GO:0005634 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 GO:GO:0000381
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K14778
GeneTree:ENSGT00670000098028 EMBL:L13612 EMBL:Z23266 EMBL:AY058728
PIR:S38329 RefSeq:NP_476927.1 UniGene:Dm.4231
ProteinModelPortal:Q07886 SMR:Q07886 PaxDb:Q07886
EnsemblMetazoa:FBtr0088564 GeneID:35917 KEGG:dme:Dmel_CG12759
CTD:35917 FlyBase:FBgn0010220 InParanoid:Q07886 OMA:CQLLSMT
OrthoDB:EOG431ZDJ PhylomeDB:Q07886 GenomeRNAi:35917 NextBio:795815
Bgee:Q07886 GermOnline:CG12759 Uniprot:Q07886
Length = 521
Score = 170 (64.9 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 66/251 (26%), Positives = 118/251 (47%)
Query: 9 LDMLWSFIKAHLNSKILVFLTSCKQVKYVFEAFKKLRPGIPLMCLYGRMKQDRRMAIYAQ 68
++ L + + + N+ +++F + K + + K + I +CL+G M+Q R+A ++
Sbjct: 239 IEALRKYREENENANVMIFTNTKKYCQLLSMTLKNME--IDNVCLHGFMRQKERVAALSR 296
Query: 69 FCEKR-SVLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYNSGGRSV-LF 126
F + L TDVA+RGLD +V+ V+ P YIHRVGRTAR G S+ +F
Sbjct: 297 FKSNQIRTLIATDVAARGLDI-PSVELVMNHMLPRTPKEYIHRVGRTARAGRKGMSISIF 355
Query: 127 LTPTEMKMLEKLRE---AKIPIH-FTKANTKRL--QP-VSGLLAALLVKYPDMQHRAQKA 179
P ++++L + E K+ H + +R+ Q V+ + + + D RAQ
Sbjct: 356 RFPRDLELLAAIEEEINTKLTEHPIDQRMVERIFMQVNVTRRESEMQLDNNDFDERAQN- 414
Query: 180 FITYLRSVHIQKDKEVFDVTKLSIDEFSASLGLPMTPKIRFLNQKKGKMVPVKPVLDNAE 239
Y R I + K+ D+ A K+R + +K+ K+ +P A
Sbjct: 415 ---YRRKTWIMEGKDP--------DQMEALYRKKQKDKLREIRRKR-KLQHAEPA---AS 459
Query: 240 KEDKLMISREK 250
+E K ++ E+
Sbjct: 460 EEGKALLQDER 470
>UNIPROTKB|Q11039 [details] [associations]
symbol:deaD "Cold-shock DEAD box protein A homolog"
species:1773 "Mycobacterium tuberculosis" [GO:0005618 "cell wall"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005829 GO:GO:0005524 GO:GO:0005618
GO:GO:0006355 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR EMBL:BX842576 GO:GO:0006351 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268810 KO:K05592 InterPro:IPR005580 Pfam:PF03880
PIR:E70752 RefSeq:NP_215769.1 RefSeq:NP_335736.1
RefSeq:YP_006514628.1 ProteinModelPortal:Q11039 SMR:Q11039
PRIDE:Q11039 EnsemblBacteria:EBMYCT00000002426
EnsemblBacteria:EBMYCT00000070115 GeneID:13319832 GeneID:887069
GeneID:924778 KEGG:mtc:MT1292 KEGG:mtu:Rv1253 KEGG:mtv:RVBD_1253
PATRIC:18124606 TubercuList:Rv1253 OMA:LPQGMPK
ProtClustDB:CLSK791051 Uniprot:Q11039
Length = 563
Score = 170 (64.9 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 52/163 (31%), Positives = 83/163 (50%)
Query: 3 VPLEQKLDMLWSFIKAHLNSKILVFLTSCKQVKYVFEAFKKLRP-GIPLMCLYGRMKQ-D 60
+ + +K+D L ++ ++VF+ + KQ E +KLR G + G + Q
Sbjct: 232 IQVARKMDALTRVLEVEPFEAMIVFVRT-KQATE--EIAEKLRARGFSAAAISGDVPQAQ 288
Query: 61 RRMAIYAQFCEKRSVLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYNSG 120
R I A +L TDVA+RGLD + + V+ D P D SY+HR+GRT R
Sbjct: 289 RERTITALRDGDIDILVATDVAARGLDVER-ISHVLNYDIPHDTESYVHRIGRTGRAGRS 347
Query: 121 GRSVLFLTPTEM---KMLEK-----LREAKIPIHFTKANTKRL 155
G +++F++P E+ K +EK L EA++P NT+R+
Sbjct: 348 GAALIFVSPRELHLLKAIEKATRQTLTEAQLPT-VEDVNTQRV 389
>FB|FBgn0036754 [details] [associations]
symbol:CG5589 species:7227 "Drosophila melanogaster"
[GO:0003729 "mRNA binding" evidence=ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:AE014296
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081
GeneTree:ENSGT00550000074863 KO:K14779 OMA:NVMKQSG
RefSeq:NP_649009.1 ProteinModelPortal:Q9VVK8 SMR:Q9VVK8
STRING:Q9VVK8 PRIDE:Q9VVK8 EnsemblMetazoa:FBtr0075170 GeneID:39979
KEGG:dme:Dmel_CG5589 UCSC:CG5589-RA FlyBase:FBgn0036754
InParanoid:Q9VVK8 OrthoDB:EOG4QBZMN PhylomeDB:Q9VVK8
GenomeRNAi:39979 NextBio:816380 Bgee:Q9VVK8 Uniprot:Q9VVK8
Length = 594
Score = 171 (65.3 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 44/129 (34%), Positives = 65/129 (50%)
Query: 8 KLDMLWSFIKAHLNSKILVFLTSCKQVKYVFEAFKKLRPGIPLMCLYGRMKQDRRMAIYA 67
KL + ++ L +LVF+ S ++ K +FE L GI + ++ Q +R
Sbjct: 353 KLVAIRDLVRQGLQPPVLVFVQSKERAKQLFEEL--LYDGINVDVIHAERSQHQRDNCVK 410
Query: 68 QFCEKRS-VLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYNSGGRSVLF 126
F E VL CT++ RG+DF K V+ V+ D P SYIHR+GRT R GR++ F
Sbjct: 411 AFREGSIWVLICTELMGRGIDF-KGVNLVINYDFPPTTISYIHRIGRTGRAGRPGRAITF 469
Query: 127 LTPTEMKML 135
T + L
Sbjct: 470 FTQEDTSNL 478
Score = 42 (19.8 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 10/28 (35%), Positives = 18/28 (64%)
Query: 267 ETKDIEDEGKADLLEDVMRATRVKKNKK 294
ETK +++ K+ L+ V R ++ KN+K
Sbjct: 527 ETKG-DEKHKSTKLKKVERTEKILKNRK 553
>UNIPROTKB|I3LIB1 [details] [associations]
symbol:LOC100625841 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR001650 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
GO:GO:0004386 GeneTree:ENSGT00550000074997 EMBL:CU407277
Ensembl:ENSSSCT00000025578 OMA:VIAHYRE Uniprot:I3LIB1
Length = 442
Score = 168 (64.2 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 38/101 (37%), Positives = 60/101 (59%)
Query: 47 GIPLMCLYGRMKQDRRMAIYAQFCEKR-SVLFCTDVASRGLDFNKAVDWVVQVDCPEDVA 105
G+ + L+G + Q +R+ +F +++ +L TDVA+RGLD + V V+ P +
Sbjct: 133 GLQVGELHGNLSQTQRLEALRRFKDEQIDILVATDVAARGLDI-EGVKTVINFTMPNTIK 191
Query: 106 SYIHRVGRTARYNSGGRSVLFLTPTEMKMLEKL-REAKIPI 145
Y+HRVGRTAR GRSV + E KML+++ + AK P+
Sbjct: 192 HYVHRVGRTARAGRAGRSVSLVGEEERKMLKEIVKAAKAPV 232
>POMBASE|SPAC1F5.10 [details] [associations]
symbol:SPAC1F5.10 "ATP-dependent RNA helicase
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=IC]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=ISO] [GO:0005829 "cytosol" evidence=IDA] [GO:0006364 "rRNA
processing" evidence=ISO] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 PomBase:SPAC1F5.10 GO:GO:0005829
GO:GO:0005524 EMBL:CU329670 GO:GO:0005730 GenomeReviews:CU329670_GR
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0004004 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 KO:K13025 OMA:EDWKFDT
OrthoDB:EOG4HTD1W PIR:T38085 RefSeq:NP_592863.1
ProteinModelPortal:Q10055 SMR:Q10055 PRIDE:Q10055
EnsemblFungi:SPAC1F5.10.1 GeneID:2541602 KEGG:spo:SPAC1F5.10
NextBio:20802696 Uniprot:Q10055
Length = 394
Score = 167 (63.8 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 39/136 (28%), Positives = 72/136 (52%)
Query: 6 EQKLDMLWSFIKAHLNSKILVFLTSCKQVKYVFEAFKKLRPGIPLMCLYGRMKQDRRMAI 65
E K D L ++ ++F S ++V ++ E ++ + ++G M Q R AI
Sbjct: 245 EWKFDTLCDLYDTLTITQAVIFCNSRRKVDWLTEKMREAN--FTVTSMHGEMPQKERDAI 302
Query: 66 YAQFCEKRS-VLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYNSGGRSV 124
F + S VL CTD+ +RG+D + V V+ D P + +YIHR+GR+ R+ G ++
Sbjct: 303 MQDFRQGNSRVLICTDIWARGIDVQQ-VSLVINYDLPANRENYIHRIGRSGRFGRKGVAI 361
Query: 125 LFLTPTEMKMLEKLRE 140
F+T ++++L + +
Sbjct: 362 NFVTNEDVRILRDIEQ 377
>UNIPROTKB|A5D7C1 [details] [associations]
symbol:DDX52 "Probable ATP-dependent RNA helicase DDX52"
species:9913 "Bos taurus" [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005730 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 EMBL:BC140501 IPI:IPI00692860
RefSeq:NP_001096708.1 UniGene:Bt.51117 ProteinModelPortal:A5D7C1
SMR:A5D7C1 PRIDE:A5D7C1 Ensembl:ENSBTAT00000013622 GeneID:510826
KEGG:bta:510826 CTD:11056 GeneTree:ENSGT00550000074863
HOGENOM:HOG000242486 HOVERGEN:HBG051332 InParanoid:A5D7C1 KO:K14779
OMA:NVMKQSG OrthoDB:EOG4XKV6Q NextBio:20869637 ArrayExpress:A5D7C1
Uniprot:A5D7C1
Length = 596
Score = 170 (64.9 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 47/154 (30%), Positives = 77/154 (50%)
Query: 8 KLDMLWSFIKAHLNSKILVFLTSCKQVKYVFEAFKKLRPGIPLMCLYG-RMKQDRRMAIY 66
KL + +K N +LVF+ S ++ K +F + GI + ++ R +Q R ++
Sbjct: 397 KLLAMRELVKKGFNPPVLVFVQSIERAKELFHEL--IYEGINVDVIHADRTQQQRDNTVH 454
Query: 67 AQFCEKRSVLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYNSGGRSVLF 126
+ K VL CT + +RG+DF K V+ V+ D P YIHR+GRT R G++V F
Sbjct: 455 SFRAGKIWVLICTALLARGIDF-KGVNLVINYDFPTSSVEYIHRIGRTGRAGHKGKAVTF 513
Query: 127 LTPTEMKMLEK----LREAKIPI-HFTKANTKRL 155
T + +L +++A P+ + K K L
Sbjct: 514 FTEDDKPLLRSVANVIQQAGCPVPEYIKGFQKLL 547
>UNIPROTKB|J9P4L6 [details] [associations]
symbol:DDX52 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00550000074863 OMA:NVMKQSG
EMBL:AAEX03026218 Ensembl:ENSCAFT00000021498 Uniprot:J9P4L6
Length = 598
Score = 170 (64.9 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 47/154 (30%), Positives = 77/154 (50%)
Query: 8 KLDMLWSFIKAHLNSKILVFLTSCKQVKYVFEAFKKLRPGIPLMCLYG-RMKQDRRMAIY 66
KL + +K N +LVF+ S ++ K +F + GI + ++ R +Q R ++
Sbjct: 398 KLLAMRELVKKGFNPPVLVFVQSIERAKELFHEL--IYEGINVDVIHADRTQQQRDNTVH 455
Query: 67 AQFCEKRSVLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYNSGGRSVLF 126
+ K VL CT + +RG+DF K V+ V+ D P YIHR+GRT R G++V F
Sbjct: 456 SFRAGKIWVLICTALLARGIDF-KGVNLVINYDFPTSSVEYIHRIGRTGRAGHKGKAVTF 514
Query: 127 LTPTEMKMLEK----LREAKIPI-HFTKANTKRL 155
T + +L +++A P+ + K K L
Sbjct: 515 FTEDDKPLLRSVANVIQQAGCPVPEYIKGFQKLL 548
>UNIPROTKB|E2RB54 [details] [associations]
symbol:DDX52 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00550000074863 OMA:ERESINT
EMBL:AAEX03006616 Ensembl:ENSCAFT00000028820 Uniprot:E2RB54
Length = 601
Score = 170 (64.9 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 47/154 (30%), Positives = 77/154 (50%)
Query: 8 KLDMLWSFIKAHLNSKILVFLTSCKQVKYVFEAFKKLRPGIPLMCLYG-RMKQDRRMAIY 66
KL + +K N +LVF+ S ++ K +F + GI + ++ R +Q R ++
Sbjct: 401 KLLAMRELVKKGFNPPVLVFVQSIERAKELFHEL--IYEGINVDVIHADRTQQQRDNTVH 458
Query: 67 AQFCEKRSVLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYNSGGRSVLF 126
+ K VL CT + +RG+DF K V+ V+ D P YIHR+GRT R G++V F
Sbjct: 459 SFRAGKIWVLICTALLARGIDF-KGVNLVINYDFPTSSVEYIHRIGRTGRAGHKGKAVTF 517
Query: 127 LTPTEMKMLEK----LREAKIPI-HFTKANTKRL 155
T + +L +++A P+ + K K L
Sbjct: 518 FTEDDKPLLRSVANVIQQAGCPVPEYIKGFQKLL 551
>UNIPROTKB|F1NQA6 [details] [associations]
symbol:DDX52 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00550000074863 EMBL:AADN02025730
IPI:IPI00822952 Ensembl:ENSGALT00000039070 ArrayExpress:F1NQA6
Uniprot:F1NQA6
Length = 603
Score = 170 (64.9 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 47/157 (29%), Positives = 75/157 (47%)
Query: 8 KLDMLWSFIKAHLNSKILVFLTSCKQVKYVFEAFKKLRPGIPLMCLYGRMKQDRRMAIYA 67
KL + +K +LVF+ S ++ K +F + GI + ++ Q +R +
Sbjct: 393 KLTAMRELVKKGFAPPVLVFVQSIERAKELFHEL--IYEGINVDVIHADKTQQQRDNVVH 450
Query: 68 QF-CEKRSVLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYNSGGRSVLF 126
F K VL CT + +RG+DF K V+ V+ D P YIHR+GRT R G++V F
Sbjct: 451 SFRAGKIWVLICTALLARGIDF-KGVNMVINYDLPTSAVEYIHRIGRTGRAGHTGKAVTF 509
Query: 127 LTPTEMKMLEKL----REAKIPI-----HFTKANTKR 154
T + +L + + A P+ HF K +K+
Sbjct: 510 FTEDDKPLLRSIANVIQRAGCPVPDYIKHFPKLQSKQ 546
>UNIPROTKB|F1NA53 [details] [associations]
symbol:DDX49 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00670000098028 EMBL:AADN02071779 EMBL:AADN02071780
IPI:IPI00684751 ProteinModelPortal:F1NA53
Ensembl:ENSGALT00000004949 ArrayExpress:F1NA53 Uniprot:F1NA53
Length = 402
Score = 167 (63.8 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 42/131 (32%), Positives = 68/131 (51%)
Query: 11 MLWSFIKAHLNSKILVFLTSCKQVKYVFEAFKKLRPGIPLMCLYGRMKQDRRMAIYAQFC 70
++ +F H + I++F +CK+ + + +K P + L+ MKQ +R A A+F
Sbjct: 238 LIQTFQDEHEDWSIIIFTKTCKECQILNMMLRKF--SFPSVALHSMMKQRQRFAALAKFK 295
Query: 71 EKR-SVLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYNSGGRSVLFLTP 129
+L TDVA+RGLD V V+ + P YIHRVGRTAR G S+ +T
Sbjct: 296 SSIFKILIATDVAARGLDI-PTVQVVINHNTPGLPKIYIHRVGRTARAGRNGISITMVTQ 354
Query: 130 TEMKMLEKLRE 140
++ ++ + E
Sbjct: 355 YDIHLVHAIEE 365
>UNIPROTKB|E1C4M1 [details] [associations]
symbol:DDX52 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00550000074863 OMA:NVMKQSG
EMBL:AADN02025730 IPI:IPI00593921 ProteinModelPortal:E1C4M1
Ensembl:ENSGALT00000008815 ArrayExpress:E1C4M1 Uniprot:E1C4M1
Length = 604
Score = 170 (64.9 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 47/157 (29%), Positives = 75/157 (47%)
Query: 8 KLDMLWSFIKAHLNSKILVFLTSCKQVKYVFEAFKKLRPGIPLMCLYGRMKQDRRMAIYA 67
KL + +K +LVF+ S ++ K +F + GI + ++ Q +R +
Sbjct: 394 KLTAMRELVKKGFAPPVLVFVQSIERAKELFHEL--IYEGINVDVIHADKTQQQRDNVVH 451
Query: 68 QF-CEKRSVLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYNSGGRSVLF 126
F K VL CT + +RG+DF K V+ V+ D P YIHR+GRT R G++V F
Sbjct: 452 SFRAGKIWVLICTALLARGIDF-KGVNMVINYDLPTSAVEYIHRIGRTGRAGHTGKAVTF 510
Query: 127 LTPTEMKMLEKL----REAKIPI-----HFTKANTKR 154
T + +L + + A P+ HF K +K+
Sbjct: 511 FTEDDKPLLRSIANVIQRAGCPVPDYIKHFPKLQSKQ 547
>FB|FBgn0015331 [details] [associations]
symbol:abs "abstrakt" species:7227 "Drosophila melanogaster"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=NAS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0030010
"establishment of cell polarity" evidence=NAS] [GO:0007399 "nervous
system development" evidence=NAS] [GO:0005634 "nucleus"
evidence=NAS] [GO:0009653 "anatomical structure morphogenesis"
evidence=NAS] [GO:0006915 "apoptotic process" evidence=NAS]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IDA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
InterPro:IPR001650 InterPro:IPR001878 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50158
PROSITE:PS51194 SMART:SM00343 SMART:SM00490 EMBL:AE014297
GO:GO:0005524 GO:GO:0046872 GO:GO:0008270 GO:GO:0003723
GO:GO:0004386 GO:GO:0071011 GO:GO:0000398 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 KO:K13116 EMBL:AF212866 EMBL:AF187729
EMBL:AY051752 RefSeq:NP_524220.1 UniGene:Dm.3300
ProteinModelPortal:Q9V3C0 SMR:Q9V3C0 DIP:DIP-21861N IntAct:Q9V3C0
MINT:MINT-341079 STRING:Q9V3C0 PaxDb:Q9V3C0 PRIDE:Q9V3C0
EnsemblMetazoa:FBtr0078967 GeneID:40530 KEGG:dme:Dmel_CG14637
UCSC:CG14637-RA CTD:40530 FlyBase:FBgn0015331 InParanoid:Q9V3C0
OMA:KDQEERS OrthoDB:EOG4KWH7Z PhylomeDB:Q9V3C0 GenomeRNAi:40530
NextBio:819209 Bgee:Q9V3C0 GermOnline:CG14637 Uniprot:Q9V3C0
Length = 619
Score = 170 (64.9 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 42/122 (34%), Positives = 65/122 (53%)
Query: 24 ILVFLTSCKQVKYVFEAFKKLRPGIPLMCLYGRMKQDRRM-AIYAQFCEKRSVLFCTDVA 82
+L+F + V + E L G+ + ++G Q+ R A+ A K+ VL TDVA
Sbjct: 431 VLIFAEKKQDVDCIHEYL--LLKGVEAVAIHGGKDQEERSRAVDAYRVGKKDVLVATDVA 488
Query: 83 SRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYNSGGRSVLFLTPT-EMKMLEKLREA 141
S+GLDF V V+ D P+D+ +Y+HR+GRT R N+ G + + T E +L L+
Sbjct: 489 SKGLDFPN-VQHVINYDMPDDIENYVHRIGRTGRSNTKGLATTLINKTTEQSVLLDLKHL 547
Query: 142 KI 143
I
Sbjct: 548 LI 549
>UNIPROTKB|F1NQV5 [details] [associations]
symbol:DDX27 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00550000074997 EMBL:AADN02019007 IPI:IPI00579774
Ensembl:ENSGALT00000039062 ArrayExpress:F1NQV5 Uniprot:F1NQV5
Length = 758
Score = 171 (65.3 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 66/247 (26%), Positives = 114/247 (46%)
Query: 53 LYGRMKQDRRMAIYAQFCEKR-SVLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRV 111
L+G + Q +R+ +F +++ +L TDVA+RGLD + V V+ P Y+HRV
Sbjct: 455 LHGNLSQAQRLEALRRFKDEQIDILVATDVAARGLDI-EGVKTVINFTMPNTTKHYVHRV 513
Query: 112 GRTARYNSGGRSVLFLTPTEMKMLEKL-REAKIPIHFTKANTKRLQPVSGLLAALLVKYP 170
GRTAR GRSV + E KML+++ + AK P+ KA R+ P +L K
Sbjct: 514 GRTARAGRAGRSVSLVGEEERKMLKEIVKAAKTPV---KA---RILPQDVILK-FREKIE 566
Query: 171 DMQHRAQKAFITYLRSVHIQKDKEVFDVTKLSIDEFSASLGLPMTPKIRFLNQKKGKMVP 230
+++ +Q+ + + K ++E + F +++ K
Sbjct: 567 NLEKDVYAVLCLEREEREMQQSEAQINKAKKQLEEGKQEAATKGVERSWFQTREERK--- 623
Query: 231 VKPVLDNAEKEDKLMISREKLLPDNFTEENVDRDILETKDIEDEGKADLLEDVMRATRV- 289
K L A +E L + R K F ++ R T E+ + ++L+ M A R+
Sbjct: 624 -KEKLAKALQEFDLAL-RGKKKRKKFMQDT-QRKAQMTP--EERSQFEILKSQMYAERLA 678
Query: 290 KKNKKLK 296
K+N+++K
Sbjct: 679 KRNRRVK 685
>UNIPROTKB|E1C187 [details] [associations]
symbol:DDX27 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00550000074997 OMA:TRTFTDH EMBL:AADN02019007
IPI:IPI00822640 Ensembl:ENSGALT00000011297 ArrayExpress:E1C187
Uniprot:E1C187
Length = 759
Score = 171 (65.3 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 66/247 (26%), Positives = 114/247 (46%)
Query: 53 LYGRMKQDRRMAIYAQFCEKR-SVLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRV 111
L+G + Q +R+ +F +++ +L TDVA+RGLD + V V+ P Y+HRV
Sbjct: 456 LHGNLSQAQRLEALRRFKDEQIDILVATDVAARGLDI-EGVKTVINFTMPNTTKHYVHRV 514
Query: 112 GRTARYNSGGRSVLFLTPTEMKMLEKL-REAKIPIHFTKANTKRLQPVSGLLAALLVKYP 170
GRTAR GRSV + E KML+++ + AK P+ KA R+ P +L K
Sbjct: 515 GRTARAGRAGRSVSLVGEEERKMLKEIVKAAKTPV---KA---RILPQDVILK-FREKIE 567
Query: 171 DMQHRAQKAFITYLRSVHIQKDKEVFDVTKLSIDEFSASLGLPMTPKIRFLNQKKGKMVP 230
+++ +Q+ + + K ++E + F +++ K
Sbjct: 568 NLEKDVYAVLCLEREEREMQQSEAQINKAKKQLEEGKQEAATKGVERSWFQTREERK--- 624
Query: 231 VKPVLDNAEKEDKLMISREKLLPDNFTEENVDRDILETKDIEDEGKADLLEDVMRATRV- 289
K L A +E L + R K F ++ R T E+ + ++L+ M A R+
Sbjct: 625 -KEKLAKALQEFDLAL-RGKKKRKKFMQDT-QRKAQMTP--EERSQFEILKSQMYAERLA 679
Query: 290 KKNKKLK 296
K+N+++K
Sbjct: 680 KRNRRVK 686
>UNIPROTKB|Q9Y6V7 [details] [associations]
symbol:DDX49 "Probable ATP-dependent RNA helicase DDX49"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
EMBL:AC002985 KO:K14778 HOGENOM:HOG000268802 OMA:EVRTVEQ
HOVERGEN:HBG100512 EMBL:AK223294 EMBL:BC002674 IPI:IPI00003739
RefSeq:NP_061943.2 UniGene:Hs.143187 ProteinModelPortal:Q9Y6V7
SMR:Q9Y6V7 IntAct:Q9Y6V7 STRING:Q9Y6V7 PhosphoSite:Q9Y6V7
DMDM:74753527 PaxDb:Q9Y6V7 PRIDE:Q9Y6V7 DNASU:54555
Ensembl:ENST00000247003 GeneID:54555 KEGG:hsa:54555 UCSC:uc002nkq.2
CTD:54555 GeneCards:GC19P019030 HGNC:HGNC:18684 neXtProt:NX_Q9Y6V7
PharmGKB:PA134956171 InParanoid:Q9Y6V7 OrthoDB:EOG4C87SC
PhylomeDB:Q9Y6V7 GenomeRNAi:54555 NextBio:57032 ArrayExpress:Q9Y6V7
Bgee:Q9Y6V7 CleanEx:HS_DDX49 Genevestigator:Q9Y6V7
GermOnline:ENSG00000105671 Uniprot:Q9Y6V7
Length = 483
Score = 168 (64.2 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 45/145 (31%), Positives = 73/145 (50%)
Query: 1 MIVPLEQK----LDMLWSFIKAHLNSKILVFLTSCKQVKYVFEAFKKLRPGIPLMCLYGR 56
++VP + K + ++ F H + I++F +CK + + +K P + L+
Sbjct: 224 LLVPEKVKDAYLVHLIQRFQDEHEDWSIIIFTNTCKTCQILCMMLRKF--SFPTVALHSM 281
Query: 57 MKQDRRMAIYAQFCEK-RSVLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTA 115
MKQ R A A+F +L TDVASRGLD V V+ + P YIHRVGRTA
Sbjct: 282 MKQKERFAALAKFKSSIYRILIATDVASRGLDI-PTVQVVINHNTPGLPKIYIHRVGRTA 340
Query: 116 RYNSGGRSVLFLTPTEMKMLEKLRE 140
R G+++ +T ++ ++ + E
Sbjct: 341 RAGRQGQAITLVTQYDIHLVHAIEE 365
>POMBASE|SPBC17D1.06 [details] [associations]
symbol:dbp3 "ATP-dependent RNA helicase Dbp3
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000027
"ribosomal large subunit assembly" evidence=ISO] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=ISM]
[GO:0005730 "nucleolus" evidence=ISO;IDA] [GO:0006364 "rRNA
processing" evidence=ISO] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 PomBase:SPBC17D1.06 GO:GO:0005524
GO:GO:0005730 EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0004004 GO:GO:0000027 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268804 KO:K14811 OrthoDB:EOG42JS0S
PIR:T39709 RefSeq:NP_596388.1 ProteinModelPortal:Q10202
STRING:Q10202 PRIDE:Q10202 EnsemblFungi:SPBC17D1.06.1
GeneID:2540213 KEGG:spo:SPBC17D1.06 OMA:DRILVFC NextBio:20801345
Uniprot:Q10202
Length = 578
Score = 169 (64.5 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 57/172 (33%), Positives = 86/172 (50%)
Query: 11 MLWSFIKAHLNS-----KILVFLTSCKQVKYVFEAFKKLRPGIPLMCLYGRMKQDRRMAI 65
ML + ++ HL+S KIL+F+ K+ V E L ++ ++G M Q R+
Sbjct: 402 MLDNLLRKHLSSGGKDDKILIFVLYKKEAARV-EG--TLARKYNVVGIHGDMSQGARLQA 458
Query: 66 YAQFCE-KRSVLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYNSGGRSV 124
F K VL TDVA+RGLD K V V+ V P + Y+HR+GRT R N+ G ++
Sbjct: 459 LNDFKSGKCPVLVATDVAARGLDIPK-VQLVINVTFPLTIEDYVHRIGRTGRANTKGTAI 517
Query: 125 LFLTPTEM----KMLEKLREAK--IPIHFTKANTKRLQPVSGLLAALLVKYP 170
F TP + +++ LR+AK IP K T ++P + +V P
Sbjct: 518 TFFTPQDKSHAGELVNVLRQAKQDIPEGLFKFGTA-VKPKLNAYGSRVVDVP 568
>SGD|S000002428 [details] [associations]
symbol:FAL1 "Nucleolar protein required for maturation of 18S
rRNA" species:4932 "Saccharomyces cerevisiae" [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0097078 "FAl1-SGD1 complex" evidence=IPI] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 SGD:S000002428 GO:GO:0005524
GO:GO:0005730 EMBL:BK006938 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195 EMBL:X95966
EMBL:Z49770 GeneTree:ENSGT00680000100003 GO:GO:0000462 KO:K13025
OrthoDB:EOG4HTD1W EMBL:Z74317 EMBL:AY723767 PIR:S54644
RefSeq:NP_010304.3 RefSeq:NP_010309.3 ProteinModelPortal:Q12099
SMR:Q12099 DIP:DIP-4516N IntAct:Q12099 MINT:MINT-503789
STRING:Q12099 PaxDb:Q12099 PeptideAtlas:Q12099 EnsemblFungi:YDR021W
GeneID:851584 GeneID:851590 KEGG:sce:YDR021W KEGG:sce:YDR026C
CYGD:YDR021w KO:K09424 OMA:IFGKQPF NextBio:969055
Genevestigator:Q12099 GermOnline:YDR021W GO:GO:0097078
Uniprot:Q12099
Length = 399
Score = 166 (63.5 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 43/152 (28%), Positives = 80/152 (52%)
Query: 6 EQKLDMLWSFIKAHLNSKILVFLTSCKQVKYVFEAFKKLRPGIPLMCLYGRMKQDRRMAI 65
E K D L + ++ ++F + K+V ++ + + ++ ++ ++G MKQ+ R +
Sbjct: 250 EWKFDTLCDIYDSLTITQCVIFCNTKKKVDWLSQ--RLIQSNFAVVSMHGDMKQEERDKV 307
Query: 66 YAQFCEKRS-VLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYNSGGRSV 124
F S VL TDV +RG+D + V V+ D PE + +YIHR+GR+ R+ G ++
Sbjct: 308 MNDFRTGHSRVLISTDVWARGIDVQQ-VSLVINYDLPEIIENYIHRIGRSGRFGRKGVAI 366
Query: 125 LFLTPTEMKMLEKLREA-KIPIHFTKANTKRL 155
F+T ++ L ++ + I I+ AN L
Sbjct: 367 NFITKADLAKLREIEKFYSIKINPMPANFAEL 398
>WB|WBGene00010260 [details] [associations]
symbol:F58E10.3 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040010 "positive regulation of
growth rate" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0009792 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823
GeneTree:ENSGT00660000095174 HSSP:P10081 EMBL:Z81555 PIR:T22917
RefSeq:NP_001041134.1 ProteinModelPortal:Q9XUW5 SMR:Q9XUW5
STRING:Q9XUW5 PaxDb:Q9XUW5 PRIDE:Q9XUW5 EnsemblMetazoa:F58E10.3a.1
EnsemblMetazoa:F58E10.3a.2 EnsemblMetazoa:F58E10.3a.3
EnsemblMetazoa:F58E10.3a.4 EnsemblMetazoa:F58E10.3a.5 GeneID:179897
KEGG:cel:CELE_F58E10.3 UCSC:F58E10.3a.1 CTD:179897
WormBase:F58E10.3a InParanoid:Q9XUW5 OMA:YVLQEIT NextBio:907314
ArrayExpress:Q9XUW5 Uniprot:Q9XUW5
Length = 561
Score = 168 (64.2 bits), Expect = 2.0e-09, P = 2.0e-09
Identities = 43/142 (30%), Positives = 72/142 (50%)
Query: 6 EQKLDMLWSFIKAHLNSKILVFLTSCKQVKYVFEAFKKLRPGIPLMCLYGRMKQDRRMAI 65
+ KL L + I K ++F+ + ++ + A + R G P +C++G Q R +
Sbjct: 361 QAKLMELLNHIMNQKECKTIIFVETKRKADELTRAMR--RDGWPTLCIHGDKNQGERDWV 418
Query: 66 YAQF-CEKRSVLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYNSGGRSV 124
+F K ++ TDVA+RGLD + + +V+ D P + Y+HR+GRT R + G +
Sbjct: 419 LQEFKAGKTPIMLATDVAARGLDVDD-IKFVINYDYPNNSEDYVHRIGRTGRSDKKGTAY 477
Query: 125 LFLTPTEMK----MLEKLREAK 142
F T T +L+ L EAK
Sbjct: 478 TFFTHTNASKAKDLLKVLDEAK 499
>UNIPROTKB|F1NYX0 [details] [associations]
symbol:DDX49 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00670000098028 OMA:CQLLSMT EMBL:AADN02071779
EMBL:AADN02071780 IPI:IPI00822654 Ensembl:ENSGALT00000035055
ArrayExpress:F1NYX0 Uniprot:F1NYX0
Length = 482
Score = 167 (63.8 bits), Expect = 2.2e-09, Sum P(2) = 2.2e-09
Identities = 42/131 (32%), Positives = 68/131 (51%)
Query: 11 MLWSFIKAHLNSKILVFLTSCKQVKYVFEAFKKLRPGIPLMCLYGRMKQDRRMAIYAQFC 70
++ +F H + I++F +CK+ + + +K P + L+ MKQ +R A A+F
Sbjct: 241 LIQTFQDEHEDWSIIIFTKTCKECQILNMMLRKF--SFPSVALHSMMKQRQRFAALAKFK 298
Query: 71 EKR-SVLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYNSGGRSVLFLTP 129
+L TDVA+RGLD V V+ + P YIHRVGRTAR G S+ +T
Sbjct: 299 SSIFKILIATDVAARGLDI-PTVQVVINHNTPGLPKIYIHRVGRTARAGRNGISITMVTQ 357
Query: 130 TEMKMLEKLRE 140
++ ++ + E
Sbjct: 358 YDIHLVHAIEE 368
Score = 41 (19.5 bits), Expect = 2.2e-09, Sum P(2) = 2.2e-09
Identities = 16/41 (39%), Positives = 22/41 (53%)
Query: 265 ILETKD--IEDEGKADLLEDVMRATRVKKNKKLKINVHRPL 303
ILE KD +E++ KA+L A KKN K + V + L
Sbjct: 420 ILEGKDPDLEEKRKAEL------AKIKKKNNKFREKVQQTL 454
>FB|FBgn0034496 [details] [associations]
symbol:CG9143 species:7227 "Drosophila melanogaster"
[GO:0003729 "mRNA binding" evidence=ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 EMBL:AE013599
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HSSP:P10081 KO:K14805 GeneTree:ENSGT00550000074847
OMA:DAYLYYI EMBL:BT010296 RefSeq:NP_611467.1 UniGene:Dm.22095
SMR:Q6NQY9 STRING:Q6NQY9 EnsemblMetazoa:FBtr0086304 GeneID:37296
KEGG:dme:Dmel_CG9143 UCSC:CG9143-RA FlyBase:FBgn0034496
InParanoid:Q6NQY9 OrthoDB:EOG4VQ84N GenomeRNAi:37296 NextBio:802980
Uniprot:Q6NQY9
Length = 813
Score = 172 (65.6 bits), Expect = 2.4e-09, Sum P(2) = 2.4e-09
Identities = 49/139 (35%), Positives = 74/139 (53%)
Query: 1 MIVPLEQKLDMLWSFIKAHLNSKILVFLTSCKQVKYVFEAFKKLRPGIPLMCLYGRMKQD 60
++ P++ K L+ FI+ H + +VF S VK + F L PL L+ M Q
Sbjct: 526 LLCPIDHKDYHLYYFIQRH-PGRTIVFCNSIDCVKRLATLFGLLDCN-PLP-LHANMIQK 582
Query: 61 RRMAIYAQFCEKRS-VLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYNS 119
+R+ +F + + +L TDVA+RGLD V+ V+ P +Y+HR GRTAR N
Sbjct: 583 QRLKNLERFRDSPTGLLIATDVAARGLDIPN-VEHVIHYQVPRTSENYVHRSGRTARANK 641
Query: 120 GGRSVLFLTPTEMKMLEKL 138
G +V+F+ P E+K KL
Sbjct: 642 HGITVMFMEPGEVKSYVKL 660
Score = 42 (19.8 bits), Expect = 2.4e-09, Sum P(2) = 2.4e-09
Identities = 11/30 (36%), Positives = 15/30 (50%)
Query: 400 ERGRRKKAKIYFDSDSDNDNDERKQNKDDN 429
ERG KK D D NDE ++D++
Sbjct: 706 ERGWMKKHAEEMDMIIDGYNDESGSDQDED 735
>MGI|MGI:2385884 [details] [associations]
symbol:Ddx27 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 27"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 MGI:MGI:2385884 GO:GO:0005524
GO:GO:0005634 EMBL:CH466551 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 CTD:55661
GeneTree:ENSGT00550000074997 HOGENOM:HOG000265456
HOVERGEN:HBG106162 KO:K13181 OMA:TRTFTDH OrthoDB:EOG4NVZJV
EMBL:AK134274 EMBL:AK138442 EMBL:AL591711 EMBL:BC011321
EMBL:BC024730 EMBL:BC026381 IPI:IPI00122038 IPI:IPI00230236
RefSeq:NP_694705.2 UniGene:Mm.295031 ProteinModelPortal:Q921N6
SMR:Q921N6 PhosphoSite:Q921N6 PaxDb:Q921N6 PRIDE:Q921N6
Ensembl:ENSMUST00000018143 Ensembl:ENSMUST00000150571 GeneID:228889
KEGG:mmu:228889 UCSC:uc008nza.1 InParanoid:Q3UUG2 NextBio:379240
Bgee:Q921N6 CleanEx:MM_DDX27 Genevestigator:Q921N6
GermOnline:ENSMUSG00000017999 Uniprot:Q921N6
Length = 760
Score = 169 (64.5 bits), Expect = 2.5e-09, P = 2.5e-09
Identities = 39/101 (38%), Positives = 60/101 (59%)
Query: 47 GIPLMCLYGRMKQDRRMAIYAQFCEKR-SVLFCTDVASRGLDFNKAVDWVVQVDCPEDVA 105
G+ + L+G + Q +R+ +F +++ +L TDVA+RGLD + V V+ P V
Sbjct: 453 GLQVGELHGNLSQTQRLEALRRFKDEQIDILVATDVAARGLDI-EGVKTVINFTMPNTVK 511
Query: 106 SYIHRVGRTARYNSGGRSVLFLTPTEMKMLEKL-REAKIPI 145
Y+HRVGRTAR GRSV + E KML+++ + AK P+
Sbjct: 512 HYVHRVGRTARAGRAGRSVSLVGEEERKMLKEIVKAAKAPV 552
>UNIPROTKB|Q83DM8 [details] [associations]
symbol:rhlE "ATP-dependent RNA helicase" species:227377
"Coxiella burnetii RSA 493" [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:AE016828 GenomeReviews:AE016828_GR InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927 OMA:HLIKQHN
RefSeq:NP_819700.2 ProteinModelPortal:Q83DM8 GeneID:1208557
KEGG:cbu:CBU_0670 PATRIC:17930019 ProtClustDB:CLSK914228
BioCyc:CBUR227377:GJ7S-666-MONOMER Uniprot:Q83DM8
Length = 420
Score = 165 (63.1 bits), Expect = 2.5e-09, P = 2.5e-09
Identities = 46/147 (31%), Positives = 80/147 (54%)
Query: 3 VPLEQKLDMLWSFIKAHLN-SKILVFLTSCKQVKYVFEAFKKLRPGIPLMCLYGRMKQDR 61
V ++K ++L SF+ N ++LVF + + + + G+ ++G Q
Sbjct: 238 VDRQRKRELL-SFMIGSKNWRQVLVFTRTKHGANRLSQQLES--DGLSSAAIHGNKSQAA 294
Query: 62 RMAIYAQFCE-KRSVLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYNSG 120
RM QF + K VL TDVA+RGLD +K + V+ + P+ Y+HRVGRT R ++
Sbjct: 295 RMRALTQFKQGKIRVLVATDVAARGLDIDK-LPHVINFELPDAAKDYVHRVGRTGRASND 353
Query: 121 GRSVLFLTPTEMKML---EKLREAKIP 144
G ++ ++ E+++L EKL ++K+P
Sbjct: 354 GVAISLVSGDEVRLLRDIEKLLQSKMP 380
>TIGR_CMR|CBU_0670 [details] [associations]
symbol:CBU_0670 "ATP-dependent RNA helicase RhlE,
putative" species:227377 "Coxiella burnetii RSA 493" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE016828 GenomeReviews:AE016828_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927
OMA:HLIKQHN RefSeq:NP_819700.2 ProteinModelPortal:Q83DM8
GeneID:1208557 KEGG:cbu:CBU_0670 PATRIC:17930019
ProtClustDB:CLSK914228 BioCyc:CBUR227377:GJ7S-666-MONOMER
Uniprot:Q83DM8
Length = 420
Score = 165 (63.1 bits), Expect = 2.5e-09, P = 2.5e-09
Identities = 46/147 (31%), Positives = 80/147 (54%)
Query: 3 VPLEQKLDMLWSFIKAHLN-SKILVFLTSCKQVKYVFEAFKKLRPGIPLMCLYGRMKQDR 61
V ++K ++L SF+ N ++LVF + + + + G+ ++G Q
Sbjct: 238 VDRQRKRELL-SFMIGSKNWRQVLVFTRTKHGANRLSQQLES--DGLSSAAIHGNKSQAA 294
Query: 62 RMAIYAQFCE-KRSVLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYNSG 120
RM QF + K VL TDVA+RGLD +K + V+ + P+ Y+HRVGRT R ++
Sbjct: 295 RMRALTQFKQGKIRVLVATDVAARGLDIDK-LPHVINFELPDAAKDYVHRVGRTGRASND 353
Query: 121 GRSVLFLTPTEMKML---EKLREAKIP 144
G ++ ++ E+++L EKL ++K+P
Sbjct: 354 GVAISLVSGDEVRLLRDIEKLLQSKMP 380
>RGD|1311124 [details] [associations]
symbol:Ddx49 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 49"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 RGD:1311124 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 OMA:EVRTVEQ
GeneTree:ENSGT00670000098028 IPI:IPI00362462 PRIDE:E9PTF0
Ensembl:ENSRNOT00000004891 UCSC:RGD:1311124 Uniprot:E9PTF0
Length = 480
Score = 166 (63.5 bits), Expect = 2.5e-09, P = 2.5e-09
Identities = 41/118 (34%), Positives = 61/118 (51%)
Query: 24 ILVFLTSCKQVKYVFEAFKKLRPGIPLMCLYGRMKQDRRMAIYAQFCEKR-SVLFCTDVA 82
I++F +CK + + +K P + L+ MKQ R A A+F +L TDVA
Sbjct: 251 IIIFTNTCKTCQILCMMLRKFN--FPTVALHSMMKQKERFAALARFKSSTYRILIATDVA 308
Query: 83 SRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYNSGGRSVLFLTPTEMKMLEKLRE 140
SRGLD V V+ + P YIHRVGRTAR G+++ +T ++ +L + E
Sbjct: 309 SRGLDI-PTVQVVINHNTPGLPKIYIHRVGRTARAGRQGQAITLVTQYDIHLLHAIEE 365
>POMBASE|SPBC691.04 [details] [associations]
symbol:SPBC691.04 "mitochondrial ATP-dependent RNA
helicase Mss116 (predicted)" species:4896 "Schizosaccharomyces
pombe" [GO:0003723 "RNA binding" evidence=IEA] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005524
"ATP binding" evidence=ISM] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0005759 "mitochondrial matrix" evidence=ISS]
[GO:0006417 "regulation of translation" evidence=IEA] [GO:0008380
"RNA splicing" evidence=ISS] [GO:0032543 "mitochondrial
translation" evidence=NAS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 PomBase:SPBC691.04 GO:GO:0005524
GO:GO:0006417 GO:GO:0008380 GO:GO:0005759 EMBL:CU329671
GO:GO:0006397 GenomeReviews:CU329671_GR GO:GO:0003723 GO:GO:0032543
EMBL:AB004535 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
RefSeq:NP_595596.1 ProteinModelPortal:O13622 STRING:O13622
EnsemblFungi:SPBC691.04.1 GeneID:2541136 KEGG:spo:SPBC691.04
OrthoDB:EOG437VPN NextBio:20802249 Uniprot:O13622
Length = 535
Score = 166 (63.5 bits), Expect = 3.1e-09, P = 3.1e-09
Identities = 42/132 (31%), Positives = 67/132 (50%)
Query: 9 LDMLWSFIKAHLNSKILVFLTSCKQVKYVFEAFKKLRPGIPLMCLYGRMKQDRRMAIYAQ 68
L +L ++ +S+I+VFL + V +V + IP L+ + +R +I
Sbjct: 280 LSLLQQLTSSNPSSRIIVFLPTISMVDFVGGVLEN-HLKIPCFILHSGLTTAQRRSITES 338
Query: 69 FCEKRS-VLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYNSGGRSVLFL 127
F + +S +LF TDV +RG+DF + VVQ+ P + YIHR+GRT R G + L L
Sbjct: 339 FRKCQSGILFATDVVARGMDFPN-ITQVVQITGPSNTDDYIHRIGRTGRAGKTGEAYLIL 397
Query: 128 TPTEMKMLEKLR 139
E L ++
Sbjct: 398 LEQEKPFLNSIK 409
>GENEDB_PFALCIPARUM|PFL1310c [details] [associations]
symbol:PFL1310c "ATP-dependent RNA helicase,
putative" species:5833 "Plasmodium falciparum" [GO:0016070 "RNA
metabolic process" evidence=ISS] [GO:0003723 "RNA binding"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:AE014188 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083
HOGENOM:HOG000268804 KO:K12823 RefSeq:XP_001350668.1
ProteinModelPortal:Q8I5E7 PRIDE:Q8I5E7
EnsemblProtists:PFL1310c:mRNA GeneID:811314 KEGG:pfa:PFL1310c
EuPathDB:PlasmoDB:PF3D7_1227100 ProtClustDB:CLSZ2500975
Uniprot:Q8I5E7
Length = 742
Score = 168 (64.2 bits), Expect = 3.1e-09, P = 3.1e-09
Identities = 52/161 (32%), Positives = 80/161 (49%)
Query: 3 VPLEQKLDM---LWSFIKAHL-NSKILVFLTSCKQVKYVFEAFKKLR-PGIPLMCLYGRM 57
V + +DM L ++K + N+KIL+F C + K+LR + ++G
Sbjct: 578 VIISSSIDMKKKLLDWLKENYENNKILIF---CDTKRNCDNLCKELRYHQYNALSIHGDK 634
Query: 58 KQDRRMAIYAQFCEKR-SVLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTAR 116
+Q R I + R ++L TDVASRGLD K + V+ D P + YIHR+GRT R
Sbjct: 635 QQRERDRILNNYKTDRCNILVATDVASRGLDI-KNISVVINYDIPNTIEDYIHRIGRTGR 693
Query: 117 YNSGGRSVLFLTPTEMKMLEKLREAKIPIHFTKANTKRLQP 157
G+S+LF + + M +KL+ AK I + + P
Sbjct: 694 AGKKGKSILFFS-YDYYMPQKLKFAKELIKLLNKTNQTVPP 733
>WB|WBGene00018890 [details] [associations]
symbol:F55F8.2 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0040002 "collagen and cuticulin-based cuticle
development" evidence=IMP] [GO:0006898 "receptor-mediated
endocytosis" evidence=IMP] [GO:0040035 "hermaphrodite genitalia
development" evidence=IMP] [GO:0007276 "gamete generation"
evidence=IMP] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0006898 GO:GO:0040007 GO:GO:0040010 GO:GO:0002119
GO:GO:0003676 GO:GO:0040035 GO:GO:0040002 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0007276 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081
KO:K14805 HOGENOM:HOG000290702 GeneTree:ENSGT00550000074847
OMA:VEEGYFA EMBL:FO081477 PIR:T29584 RefSeq:NP_491652.1
ProteinModelPortal:P91340 SMR:P91340 STRING:P91340 PaxDb:P91340
PRIDE:P91340 EnsemblMetazoa:F55F8.2a GeneID:172223
KEGG:cel:CELE_F55F8.2 UCSC:F55F8.2a CTD:172223 WormBase:F55F8.2a
InParanoid:P91340 NextBio:874573 ArrayExpress:P91340 Uniprot:P91340
Length = 746
Score = 168 (64.2 bits), Expect = 3.1e-09, P = 3.1e-09
Identities = 41/117 (35%), Positives = 64/117 (54%)
Query: 23 KILVFLTSCKQVKYVFEAFKKLRPGIPLMCLYGRMKQDRRMAIYAQFCE-KRSVLFCTDV 81
+ +VF+ S + ++ K + I M L+ +M Q +R+ +F E K +VL TDV
Sbjct: 442 RTIVFVNSIDAARRLYSVLKSVN--IDPMILHAKMIQKQRLKNLEKFSESKNAVLLATDV 499
Query: 82 ASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYNSGGRSVLFLTPTEMKMLEKL 138
A+RGLD + +D V+ P+ V YIHR GRTAR + G +V+ + P + KL
Sbjct: 500 AARGLDI-QGIDHVIHYQVPKKVEIYIHRSGRTARASHRGLTVVLVDPPSRQFYMKL 555
>UNIPROTKB|A1A4H6 [details] [associations]
symbol:DDX27 "Probable ATP-dependent RNA helicase DDX27"
species:9913 "Bos taurus" [GO:0005634 "nucleus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
EMBL:BC126497 IPI:IPI00734460 RefSeq:NP_001073740.1 UniGene:Bt.2644
ProteinModelPortal:A1A4H6 PRIDE:A1A4H6 Ensembl:ENSBTAT00000057089
GeneID:514567 KEGG:bta:514567 CTD:55661
GeneTree:ENSGT00550000074997 HOGENOM:HOG000265456
HOVERGEN:HBG106162 KO:K13181 OMA:TRTFTDH NextBio:20871404
Uniprot:A1A4H6
Length = 765
Score = 168 (64.2 bits), Expect = 3.2e-09, P = 3.2e-09
Identities = 38/101 (37%), Positives = 60/101 (59%)
Query: 47 GIPLMCLYGRMKQDRRMAIYAQFCEKR-SVLFCTDVASRGLDFNKAVDWVVQVDCPEDVA 105
G+ + L+G + Q +R+ +F +++ +L TDVA+RGLD + V V+ P +
Sbjct: 456 GLQVGELHGNLSQTQRLEALRRFKDEQIDILVATDVAARGLDI-EGVKTVINFTMPNTIK 514
Query: 106 SYIHRVGRTARYNSGGRSVLFLTPTEMKMLEKL-REAKIPI 145
Y+HRVGRTAR GRSV + E KML+++ + AK P+
Sbjct: 515 HYVHRVGRTARAGRAGRSVSLVGEEERKMLKEIVKAAKAPV 555
>UNIPROTKB|F1Q073 [details] [associations]
symbol:DDX27 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00550000074997 EMBL:AAEX03013992
Ensembl:ENSCAFT00000018089 Uniprot:F1Q073
Length = 767
Score = 168 (64.2 bits), Expect = 3.3e-09, P = 3.3e-09
Identities = 38/101 (37%), Positives = 60/101 (59%)
Query: 47 GIPLMCLYGRMKQDRRMAIYAQFCEKR-SVLFCTDVASRGLDFNKAVDWVVQVDCPEDVA 105
G+ + L+G + Q +R+ +F +++ +L TDVA+RGLD + V V+ P +
Sbjct: 456 GLQVGELHGNLSQTQRLEALRRFKDEQIDILVATDVAARGLDI-EGVKTVINFTMPNTIK 514
Query: 106 SYIHRVGRTARYNSGGRSVLFLTPTEMKMLEKL-REAKIPI 145
Y+HRVGRTAR GRSV + E KML+++ + AK P+
Sbjct: 515 HYVHRVGRTARAGRAGRSVSLVGEEERKMLKEIVKAAKAPV 555
>MGI|MGI:2136689 [details] [associations]
symbol:Ddx49 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 49"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 MGI:MGI:2136689 GO:GO:0005524
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K14778 HOGENOM:HOG000268802 OMA:EVRTVEQ
GeneTree:ENSGT00670000098028 HOVERGEN:HBG100512 CTD:54555
OrthoDB:EOG4C87SC EMBL:BC099554 IPI:IPI00354271
RefSeq:NP_001020093.2 UniGene:Mm.388127 UniGene:Mm.440659
ProteinModelPortal:Q4FZF3 SMR:Q4FZF3 PhosphoSite:Q4FZF3
PRIDE:Q4FZF3 Ensembl:ENSMUST00000008004 GeneID:234374
KEGG:mmu:234374 UCSC:uc009lzu.1 InParanoid:Q4FZF3 NextBio:382139
Bgee:Q4FZF3 CleanEx:MM_DDX49 Genevestigator:Q4FZF3
GermOnline:ENSMUSG00000057788 Uniprot:Q4FZF3
Length = 480
Score = 165 (63.1 bits), Expect = 3.3e-09, P = 3.3e-09
Identities = 41/118 (34%), Positives = 61/118 (51%)
Query: 24 ILVFLTSCKQVKYVFEAFKKLRPGIPLMCLYGRMKQDRRMAIYAQFCEK-RSVLFCTDVA 82
I++F +CK + + +K P + L+ MKQ R A A+F +L TDVA
Sbjct: 251 IIIFTNTCKTCQILCMMLRKFN--FPTVALHSMMKQKERFAALAKFKSSIYRILIATDVA 308
Query: 83 SRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYNSGGRSVLFLTPTEMKMLEKLRE 140
SRGLD V V+ + P YIHRVGRTAR G+++ +T ++ +L + E
Sbjct: 309 SRGLDI-PTVQVVINHNTPGLPKIYIHRVGRTARAGRQGQAITLVTQYDIHLLHAIEE 365
>UNIPROTKB|Q4K8U0 [details] [associations]
symbol:deaD "Cold-shock DEAD box protein A" species:220664
"Pseudomonas protegens Pf-5" [GO:0003723 "RNA binding"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0006950 "response to stress"
evidence=ISS] [GO:0008026 "ATP-dependent helicase activity"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0006950
GO:GO:0006355 GO:GO:0003723 EMBL:CP000076 GenomeReviews:CP000076_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268810 KO:K05592 InterPro:IPR005580 Pfam:PF03880
OMA:LPQGMPK RefSeq:YP_261343.1 ProteinModelPortal:Q4K8U0
GeneID:3477377 KEGG:pfl:PFL_4251 PATRIC:19877913
ProtClustDB:CLSK867560 BioCyc:PFLU220664:GIX8-4286-MONOMER
Uniprot:Q4K8U0
Length = 557
Score = 166 (63.5 bits), Expect = 3.3e-09, P = 3.3e-09
Identities = 42/137 (30%), Positives = 73/137 (53%)
Query: 1 MIVPLEQKLDMLWSFIKAHLNSKILVFLTSCKQVKYVFEAFKKLRPGIPLMCLYGRMKQD 60
++V +QK + S ++ +++F+ + KQ + + + G L G + Q+
Sbjct: 225 LLVHADQKTSAVLSLLEVEDFDALIMFVRT-KQATLDLASALEAK-GYKAAALNGDIAQN 282
Query: 61 RRMAIYAQFCEKR-SVLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYNS 119
+R + + R ++ TDVA+RGLD + + V VD P D SY+HR+GRT R
Sbjct: 283 QRERVIDSLKDGRLDIVVATDVAARGLDVPR-ITHVFNVDMPYDPESYVHRIGRTGRAGR 341
Query: 120 GGRSVLFLTPTEMKMLE 136
GR++L +TP E +ML+
Sbjct: 342 EGRALLLVTPRERRMLQ 358
>CGD|CAL0003204 [details] [associations]
symbol:DBP2 species:5476 "Candida albicans" [GO:0005730
"nucleolus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 CGD:CAL0003204 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0000184 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 EMBL:AACQ01000245
EMBL:AACQ01000246 RefSeq:XP_710694.1 RefSeq:XP_710708.1
ProteinModelPortal:Q59LU0 PRIDE:Q59LU0 GeneID:3647692
GeneID:3647705 KEGG:cal:CaO19.171 KEGG:cal:CaO19.7804 KO:K12823
Uniprot:Q59LU0
Length = 562
Score = 166 (63.5 bits), Expect = 3.3e-09, P = 3.3e-09
Identities = 40/131 (30%), Positives = 71/131 (54%)
Query: 8 KLDMLWSFIKAHLN---SKILVFLTSCKQVKYVFEAFKKLRPGIPLMCLYGRMKQDRRMA 64
K D L +++ LN +KILVF ++ + + + G P + ++G +Q+ R
Sbjct: 358 KRDRLVKHLESALNEKDNKILVFASTKRTCDEITTYLRS--DGWPALAIHGDKEQNERDW 415
Query: 65 IYAQFCE-KRSVLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYNSGGRS 123
+ +F + K S++ TDVA+RG+D K + V+ D P ++ Y+HR+GRT R + G +
Sbjct: 416 VLDEFRKGKTSIMVATDVAARGIDV-KGITHVINYDMPGNIEDYVHRIGRTGRGGASGTA 474
Query: 124 VLFLTPTEMKM 134
+ F T K+
Sbjct: 475 ISFFTEGNSKL 485
>UNIPROTKB|J9P9C6 [details] [associations]
symbol:DDX27 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00550000074997 OMA:TRTFTDH EMBL:AAEX03013992
Ensembl:ENSCAFT00000046251 Uniprot:J9P9C6
Length = 788
Score = 168 (64.2 bits), Expect = 3.4e-09, P = 3.4e-09
Identities = 38/101 (37%), Positives = 60/101 (59%)
Query: 47 GIPLMCLYGRMKQDRRMAIYAQFCEKR-SVLFCTDVASRGLDFNKAVDWVVQVDCPEDVA 105
G+ + L+G + Q +R+ +F +++ +L TDVA+RGLD + V V+ P +
Sbjct: 477 GLQVGELHGNLSQTQRLEALRRFKDEQIDILVATDVAARGLDI-EGVKTVINFTMPNTIK 535
Query: 106 SYIHRVGRTARYNSGGRSVLFLTPTEMKMLEKL-REAKIPI 145
Y+HRVGRTAR GRSV + E KML+++ + AK P+
Sbjct: 536 HYVHRVGRTARAGRAGRSVSLVGEEERKMLKEIVKAAKAPV 576
>MGI|MGI:1925644 [details] [associations]
symbol:Ddx52 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 52"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 MGI:MGI:1925644 GO:GO:0005524
GO:GO:0005730 GO:GO:0003723 EMBL:CH466556 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 CTD:11056
GeneTree:ENSGT00550000074863 HOGENOM:HOG000242486
HOVERGEN:HBG051332 KO:K14779 OMA:NVMKQSG OrthoDB:EOG4XKV6Q
EMBL:AK080767 EMBL:AK133545 EMBL:AL645615 EMBL:BC029094
IPI:IPI00336965 RefSeq:NP_084372.2 UniGene:Mm.280544
ProteinModelPortal:Q8K301 SMR:Q8K301 STRING:Q8K301
PhosphoSite:Q8K301 PaxDb:Q8K301 PRIDE:Q8K301
Ensembl:ENSMUST00000049257 GeneID:78394 KEGG:mmu:78394
InParanoid:Q3UZY9 NextBio:348796 Bgee:Q8K301 CleanEx:MM_DDX52
Genevestigator:Q8K301 GermOnline:ENSMUSG00000020677 Uniprot:Q8K301
Length = 598
Score = 166 (63.5 bits), Expect = 3.7e-09, P = 3.7e-09
Identities = 46/154 (29%), Positives = 77/154 (50%)
Query: 8 KLDMLWSFIKAHLNSKILVFLTSCKQVKYVFEAFKKLRPGIPLMCLYG-RMKQDRRMAIY 66
KL + +K +LVF+ S ++ K +F + GI + ++ R +Q R ++
Sbjct: 400 KLLAMRELVKKGFKPPVLVFVQSIERAKELFHEL--IYEGINVDVIHAERTQQQRDNTVH 457
Query: 67 AQFCEKRSVLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYNSGGRSVLF 126
+ K VL CT + +RG+DF K V+ V+ D P YIHR+GRT R + G++V F
Sbjct: 458 SFRAGKIWVLICTALLARGIDF-KGVNLVINYDFPTSSVEYIHRIGRTGRAGNRGKAVTF 516
Query: 127 LTPTEMKMLEK----LREAKIPI-HFTKANTKRL 155
T + +L +++A P+ + K K L
Sbjct: 517 FTEDDKPLLRSVANVIQQAGCPVPEYIKGFQKLL 550
>ZFIN|ZDB-GENE-030131-1927 [details] [associations]
symbol:ddx41 "DEAD (Asp-Glu-Ala-Asp) box
polypeptide 41" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR001878
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS50158
PROSITE:PS51194 SMART:SM00343 SMART:SM00490
ZFIN:ZDB-GENE-030131-1927 GO:GO:0005524 GO:GO:0008270 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
EMBL:CABZ01072950 EMBL:CABZ01072951 EMBL:CABZ01072952
IPI:IPI00961669 Ensembl:ENSDART00000061987 Bgee:F1QQ09
Uniprot:F1QQ09
Length = 473
Score = 164 (62.8 bits), Expect = 4.1e-09, P = 4.1e-09
Identities = 38/105 (36%), Positives = 56/105 (53%)
Query: 24 ILVFLTSCKQVKYVFEAFKKLRPGIPLMCLYGRMKQDRRMAIYAQFCE-KRSVLFCTDVA 82
+L+F V + E L G+ + ++G Q+ R F E K+ VL TDVA
Sbjct: 286 VLIFAEKKADVDAIHEYL--LLKGVEAVAIHGGKDQEERTKAIEAFKEGKKDVLVATDVA 343
Query: 83 SRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYNSGGRSVLFL 127
S+GLDF A+ VV D PE++ +Y+HR+GRT R G + F+
Sbjct: 344 SKGLDF-PAIQHVVNYDMPEEIENYVHRIGRTGRSGKTGIATTFI 387
>CGD|CAL0004436 [details] [associations]
symbol:MSS116 species:5476 "Candida albicans" [GO:0005759
"mitochondrial matrix" evidence=IEA] [GO:0000373 "Group II intron
splicing" evidence=IEA] [GO:0034337 "RNA folding" evidence=IEA]
[GO:0000372 "Group I intron splicing" evidence=IEA] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=IEA] [GO:0033592
"RNA strand annealing activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 CGD:CAL0004436 GO:GO:0005524
GO:GO:0006417 GO:GO:0008380 GO:GO:0005759 GO:GO:0006397
GO:GO:0003723 EMBL:AACQ01000001 EMBL:AACQ01000002
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
RefSeq:XP_723235.1 RefSeq:XP_723426.1 ProteinModelPortal:Q5APM7
GeneID:3634792 GeneID:3635042 KEGG:cal:CaO19.12201
KEGG:cal:CaO19.4739 Uniprot:Q5APM7
Length = 668
Score = 166 (63.5 bits), Expect = 4.4e-09, P = 4.4e-09
Identities = 54/164 (32%), Positives = 81/164 (49%)
Query: 9 LDMLWSFIKAHLNSKILVFLTSCKQV----KYV--------FEAFKKLRPGIPLMCLYGR 56
L L +K H + K++VFL + V +Y+ FE F K P M GR
Sbjct: 333 LSELHGIMKQHNDYKVIVFLPTKTAVDWFYEYITNALDDELFELFSK--PPRVFMLHGGR 390
Query: 57 MKQDRRMAIYAQFCEKRSVLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTAR 116
+ R A+ K+ +L TDVA+RG+D K V V+Q+ ++A YIH+VGRT R
Sbjct: 391 SVRQRSAALKGFKVAKKGILISTDVAARGIDV-KDVTNVIQMFPSVEIADYIHKVGRTGR 449
Query: 117 YNSGGRSVLFLTPTEM---KMLEKLREAKIP--IHFTKANTKRL 155
G++ LF TP E+ +L++ R+ K I K N+ +
Sbjct: 450 AGKKGKASLFATPAELPYVSLLKRKRKVKFQEVIQSEKLNSSNI 493
>DICTYBASE|DDB_G0287361 [details] [associations]
symbol:ddx41 "DEAD box protein abstrakt"
species:44689 "Dictyostelium discoideum" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0006396 "RNA processing" evidence=ISS] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR001878
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS50158
PROSITE:PS51194 SMART:SM00343 SMART:SM00490 dictyBase:DDB_G0287361
GO:GO:0005524 GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
GenomeReviews:CM000154_GR GO:GO:0003723 GO:GO:0006396
EMBL:AAFI02000100 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HSSP:P09052 RefSeq:XP_637262.1 ProteinModelPortal:Q54KG1 SMR:Q54KG1
IntAct:Q54KG1 EnsemblProtists:DDB0233452 GeneID:8626092
KEGG:ddi:DDB_G0287361 KO:K13116 OMA:DICRYLC Uniprot:Q54KG1
Length = 671
Score = 166 (63.5 bits), Expect = 4.4e-09, P = 4.4e-09
Identities = 40/116 (34%), Positives = 64/116 (55%)
Query: 24 ILVFLTSCKQVKYVFEAFKKLRPGIPLMCLYGRMKQDRRMAIYAQFCE-KRSVLFCTDVA 82
+L+F + K V ++E L + + ++G QD R + F E K+ VL TDVA
Sbjct: 477 VLIFCENKKDVDDIYEYL--LLKQVEAVSIHGDKSQDERESAIKAFREGKKDVLVATDVA 534
Query: 83 SRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYNSGGRSVLFLTP--TEMKMLE 136
S+GLDF + + V+ D P ++ +YIHR+GRT R + G + F+ TE +L+
Sbjct: 535 SKGLDFPE-IQHVINFDMPREIENYIHRIGRTGRRGNKGVATTFINKNNTESLLLD 589
>UNIPROTKB|Q81QF0 [details] [associations]
symbol:BAS2301 "ATP-dependent RNA helicase, DEAD/DEAH box
family" species:1392 "Bacillus anthracis" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HSSP:Q58083 HOGENOM:HOG000268807 RefSeq:NP_844851.1
RefSeq:YP_019115.1 RefSeq:YP_028562.1 ProteinModelPortal:Q81QF0
DNASU:1085525 EnsemblBacteria:EBBACT00000011128
EnsemblBacteria:EBBACT00000014583 EnsemblBacteria:EBBACT00000019769
GeneID:1085525 GeneID:2816610 GeneID:2853183 KEGG:ban:BA_2475
KEGG:bar:GBAA_2475 KEGG:bat:BAS2301 OMA:DNKGRPG
ProtClustDB:CLSK916648 BioCyc:BANT260799:GJAJ-2367-MONOMER
BioCyc:BANT261594:GJ7F-2455-MONOMER Uniprot:Q81QF0
Length = 450
Score = 163 (62.4 bits), Expect = 4.9e-09, P = 4.9e-09
Identities = 41/113 (36%), Positives = 60/113 (53%)
Query: 31 CKQVKYVFEAFKKLRPGIPLMC--LYGRMKQDRRMAIYAQFCE-KRSVLFCTDVASRGLD 87
C+ + + L+ G+ C L+G + Q +R + F E K L TDVA+RGLD
Sbjct: 251 CRTKVRASKLYDNLK-GLGYNCAELHGDIPQAKRERVMKSFREAKIQYLIATDVAARGLD 309
Query: 88 FNKAVDWVVQVDCPEDVASYIHRVGRTARYNSGGRSVLFLTPTEMKMLEKLRE 140
+ V V D PEDV SYIHR+GRT R G ++ F+ + K LE++ +
Sbjct: 310 VD-GVTHVFNYDIPEDVESYIHRIGRTGRAGGSGLAITFVAAKDEKHLEEIEK 361
>TIGR_CMR|BA_2475 [details] [associations]
symbol:BA_2475 "ATP-dependent RNA helicase, DEAD/DEAH box
family" species:198094 "Bacillus anthracis str. Ames" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HSSP:Q58083 HOGENOM:HOG000268807 RefSeq:NP_844851.1
RefSeq:YP_019115.1 RefSeq:YP_028562.1 ProteinModelPortal:Q81QF0
DNASU:1085525 EnsemblBacteria:EBBACT00000011128
EnsemblBacteria:EBBACT00000014583 EnsemblBacteria:EBBACT00000019769
GeneID:1085525 GeneID:2816610 GeneID:2853183 KEGG:ban:BA_2475
KEGG:bar:GBAA_2475 KEGG:bat:BAS2301 OMA:DNKGRPG
ProtClustDB:CLSK916648 BioCyc:BANT260799:GJAJ-2367-MONOMER
BioCyc:BANT261594:GJ7F-2455-MONOMER Uniprot:Q81QF0
Length = 450
Score = 163 (62.4 bits), Expect = 4.9e-09, P = 4.9e-09
Identities = 41/113 (36%), Positives = 60/113 (53%)
Query: 31 CKQVKYVFEAFKKLRPGIPLMC--LYGRMKQDRRMAIYAQFCE-KRSVLFCTDVASRGLD 87
C+ + + L+ G+ C L+G + Q +R + F E K L TDVA+RGLD
Sbjct: 251 CRTKVRASKLYDNLK-GLGYNCAELHGDIPQAKRERVMKSFREAKIQYLIATDVAARGLD 309
Query: 88 FNKAVDWVVQVDCPEDVASYIHRVGRTARYNSGGRSVLFLTPTEMKMLEKLRE 140
+ V V D PEDV SYIHR+GRT R G ++ F+ + K LE++ +
Sbjct: 310 VD-GVTHVFNYDIPEDVESYIHRIGRTGRAGGSGLAITFVAAKDEKHLEEIEK 361
>GENEDB_PFALCIPARUM|PFB0860c [details] [associations]
symbol:PFB0860c "RNA helicase, putative"
species:5833 "Plasmodium falciparum" [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 EMBL:AE001362
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268802 HSSP:P10081
KO:K14777 PIR:C71604 RefSeq:XP_001349688.1
ProteinModelPortal:O96264 EnsemblProtists:PFB0860c:mRNA
GeneID:812770 KEGG:pfa:PFB0860c EuPathDB:PlasmoDB:PF3D7_0218400
OMA:KHRAKRV ProtClustDB:CLSZ2432676 Uniprot:O96264
Length = 562
Score = 164 (62.8 bits), Expect = 5.6e-09, P = 5.6e-09
Identities = 45/148 (30%), Positives = 76/148 (51%)
Query: 1 MIVPLEQKLDMLWSFIKAHLNSKILVFLTSCKQVKYVFEAFKKLRPGIPLMCLYGRMKQD 60
+ +PL+ K L S + I++F +C + + + L G+ +CL+G++ Q+
Sbjct: 375 IFLPLKYKYTYLSSLCFHYQTRNIIIFTNTCATAQKLNFFCRNL--GLKSICLHGKLTQN 432
Query: 61 RRMAIYAQF-CEKRSVLFCTDVASRGLDFNKAVDWVVQVD-CPEDVASYIHRVGRTARYN 118
+R++ F K ++L T V +RGLD + V+ D C YIHRVGRTAR
Sbjct: 433 QRLSSLNSFKVNKYNILISTQVGARGLDLQD-IKIVINFDIC--SCKEYIHRVGRTARAG 489
Query: 119 SGGRSVLFLTPTEMK---MLEKLREAKI 143
G+S+ F+T +++ +EK KI
Sbjct: 490 RSGKSITFVTQYDVENFLAIEKQLNKKI 517
>UNIPROTKB|O96264 [details] [associations]
symbol:PFB0860c "DEAD/DEAH box helicase, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
EMBL:AE001362 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268802 HSSP:P10081 KO:K14777 PIR:C71604
RefSeq:XP_001349688.1 ProteinModelPortal:O96264
EnsemblProtists:PFB0860c:mRNA GeneID:812770 KEGG:pfa:PFB0860c
EuPathDB:PlasmoDB:PF3D7_0218400 OMA:KHRAKRV ProtClustDB:CLSZ2432676
Uniprot:O96264
Length = 562
Score = 164 (62.8 bits), Expect = 5.6e-09, P = 5.6e-09
Identities = 45/148 (30%), Positives = 76/148 (51%)
Query: 1 MIVPLEQKLDMLWSFIKAHLNSKILVFLTSCKQVKYVFEAFKKLRPGIPLMCLYGRMKQD 60
+ +PL+ K L S + I++F +C + + + L G+ +CL+G++ Q+
Sbjct: 375 IFLPLKYKYTYLSSLCFHYQTRNIIIFTNTCATAQKLNFFCRNL--GLKSICLHGKLTQN 432
Query: 61 RRMAIYAQF-CEKRSVLFCTDVASRGLDFNKAVDWVVQVD-CPEDVASYIHRVGRTARYN 118
+R++ F K ++L T V +RGLD + V+ D C YIHRVGRTAR
Sbjct: 433 QRLSSLNSFKVNKYNILISTQVGARGLDLQD-IKIVINFDIC--SCKEYIHRVGRTARAG 489
Query: 119 SGGRSVLFLTPTEMK---MLEKLREAKI 143
G+S+ F+T +++ +EK KI
Sbjct: 490 RSGKSITFVTQYDVENFLAIEKQLNKKI 517
>TIGR_CMR|CPS_4097 [details] [associations]
symbol:CPS_4097 "ATP-dependent RNA helicase SrmB"
species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0008186
"RNA-dependent ATPase activity" evidence=ISS] [GO:0042254 "ribosome
biogenesis" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:CP000083 GenomeReviews:CP000083_GR InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807 KO:K05590
ProtClustDB:PRK11192 RefSeq:YP_270752.2 ProteinModelPortal:Q47WS0
STRING:Q47WS0 PRIDE:Q47WS0 GeneID:3520098 KEGG:cps:CPS_4097
PATRIC:21471063 OMA:YLDKGHF BioCyc:CPSY167879:GI48-4110-MONOMER
Uniprot:Q47WS0
Length = 430
Score = 162 (62.1 bits), Expect = 5.7e-09, P = 5.7e-09
Identities = 42/132 (31%), Positives = 70/132 (53%)
Query: 8 KLDMLWSFIKAHLNSKILVFLTSCKQVKYVFEAFKKLRPGIPLMCLYGRMKQDRRMAIYA 67
KL++L + +K + +VF + V+Y+ + K +P + L G+M QD+R
Sbjct: 244 KLNLLVNTLKQEGVERTVVFANKRETVQYL--SGKLYAEELPCVWLEGKMPQDKRNKAIE 301
Query: 68 QFCEKR-SVLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYNSGGRSVLF 126
+F + VL TDVA+RGLD + + V+ D P V YIHR+GRT R G ++
Sbjct: 302 RFKKGEVKVLVATDVAARGLDIDD-ISHVINFDMPRKVDIYIHRIGRTGRAGKKGTAISL 360
Query: 127 LTPTEMKMLEKL 138
+ +M ++ K+
Sbjct: 361 VEAHDMGVIGKI 372
>DICTYBASE|DDB_G0281711 [details] [associations]
symbol:ddx27 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0042254 "ribosome biogenesis" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
dictyBase:DDB_G0281711 GO:GO:0005524 GO:GO:0005634
GenomeReviews:CM000152_GR GO:GO:0042254 GO:GO:0003723
EMBL:AAFI02000042 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K13181 RefSeq:XP_640597.1 HSSP:Q5STU4 ProteinModelPortal:Q54TJ4
STRING:Q54TJ4 EnsemblProtists:DDB0234201 GeneID:8623207
KEGG:ddi:DDB_G0281711 OMA:SEYRAIR Uniprot:Q54TJ4
Length = 783
Score = 158 (60.7 bits), Expect = 5.8e-09, Sum P(2) = 5.8e-09
Identities = 35/87 (40%), Positives = 54/87 (62%)
Query: 53 LYGRMKQDRRMAIYAQFCEKR-SVLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRV 111
L+G + Q++R QF + + + L +DVASRGLD V V+ + P ++A+YIHRV
Sbjct: 466 LHGNLSQEQRFDSLQQFRDGQVNYLLASDVASRGLDII-GVKTVINYNMPNNMANYIHRV 524
Query: 112 GRTARYNSGGRSVLFLTPTEMKMLEKL 138
GRTAR G+S F+T + K+L+ +
Sbjct: 525 GRTARAGMDGKSCSFITDNDRKLLKDI 551
Score = 53 (23.7 bits), Expect = 5.8e-09, Sum P(2) = 5.8e-09
Identities = 27/111 (24%), Positives = 48/111 (43%)
Query: 240 KEDKLMISREKLLPDNFTEENVDRDILETKDIEDEGKADLLEDVMRATRVKKNKKLKINV 299
K +K + EK++ + + +TK ED+ K +L + + V KKLK
Sbjct: 598 KAEKTLDKAEKIISNADANVETPKVWYKTKQEEDKSK-ELWK--IENNIVNPGKKLKA-- 652
Query: 300 HRPLGTRLVFDEECNTVPPLAMLADTKNANVSLDQDQKTEYYKKIREELKR 350
P+ V N VP + L K+ L + Q+ +++ +EE +R
Sbjct: 653 --PIDVTGV-----NNVPSIKKLKQKKDPYYGLSRKQRR--HRQFKEEFER 694
Score = 40 (19.1 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 10/19 (52%), Positives = 13/19 (68%)
Query: 335 DQKTEYYKKI-REELKRAD 352
++ TE K I REE+K AD
Sbjct: 577 EELTEDIKSIVREEMKEAD 595
>RGD|1559513 [details] [associations]
symbol:RGD1559513 "similar to DEAD (Asp-Glu-Ala-Asp) box
polypeptide 41" species:10116 "Rattus norvegicus" [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR001878 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194 SMART:SM00343
SMART:SM00490 RGD:1559513 GO:GO:0005524 GO:GO:0008270 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 OrthoDB:EOG4CVG6K OMA:MEETETI
IPI:IPI00958592 Ensembl:ENSRNOT00000033492 UCSC:RGD:1559513
NextBio:667517 Uniprot:D4ADJ9
Length = 621
Score = 164 (62.8 bits), Expect = 6.6e-09, P = 6.6e-09
Identities = 37/105 (35%), Positives = 57/105 (54%)
Query: 24 ILVFLTSCKQVKYVFEAFKKLRPGIPLMCLYGRMKQDRRMAIYAQFCE-KRSVLFCTDVA 82
+L+F V + E L G+ + ++G Q+ R F E K+ VL TDVA
Sbjct: 434 VLIFAKKKADVDAIHEYL--LLKGVEAVAIHGGKDQEERTKAIEAFREGKKDVLVATDVA 491
Query: 83 SRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYNSGGRSVLFL 127
S+GLDF A+ V+ D PE++ +Y+HR+GRT R + G + F+
Sbjct: 492 SKGLDF-PAIQHVINYDMPEEIENYVHRIGRTGRSGNTGIATTFI 535
>UNIPROTKB|A3KN07 [details] [associations]
symbol:DDX41 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0051607 "defense response to virus" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0035458 "cellular response to
interferon-beta" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] InterPro:IPR001650 InterPro:IPR001878
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00343 SMART:SM00490 GO:GO:0005783 GO:GO:0005524
GO:GO:0003677 GO:GO:0008270 GO:GO:0045944 GO:GO:0051607
GO:GO:0035458 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00620000087942 HOVERGEN:HBG015893
KO:K13116 OMA:KDQEERS CTD:51428 HOGENOM:HOG000268792
OrthoDB:EOG4CVG6K EMBL:DAAA02020056 EMBL:BC133465 IPI:IPI00840518
RefSeq:NP_001076071.1 UniGene:Bt.5258 SMR:A3KN07
Ensembl:ENSBTAT00000043510 GeneID:505276 KEGG:bta:505276
InParanoid:A3KN07 NextBio:20867058 Uniprot:A3KN07
Length = 622
Score = 164 (62.8 bits), Expect = 6.6e-09, P = 6.6e-09
Identities = 37/105 (35%), Positives = 57/105 (54%)
Query: 24 ILVFLTSCKQVKYVFEAFKKLRPGIPLMCLYGRMKQDRRMAIYAQFCE-KRSVLFCTDVA 82
+L+F V + E L G+ + ++G Q+ R F E K+ VL TDVA
Sbjct: 435 VLIFAEKKADVDAIHEYL--LLKGVEAVAIHGGKDQEERTKAIEAFREGKKDVLVATDVA 492
Query: 83 SRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYNSGGRSVLFL 127
S+GLDF A+ V+ D PE++ +Y+HR+GRT R + G + F+
Sbjct: 493 SKGLDF-PAIQHVINYDMPEEIENYVHRIGRTGRSGNTGIATTFI 536
>UNIPROTKB|E2R052 [details] [associations]
symbol:DDX41 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0051607 "defense response to virus" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0035458 "cellular
response to interferon-beta" evidence=IEA] [GO:0005783 "endoplasmic
reticulum" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR001878
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00343 SMART:SM00490 GO:GO:0005783 GO:GO:0005524
GO:GO:0003677 GO:GO:0008270 GO:GO:0045944 GO:GO:0051607
GO:GO:0035458 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 KO:K13116 CTD:51428 EMBL:AAEX03002959
RefSeq:XP_536417.2 ProteinModelPortal:E2R052
Ensembl:ENSCAFT00000025858 GeneID:479274 KEGG:cfa:479274
NextBio:20854482 Uniprot:E2R052
Length = 622
Score = 164 (62.8 bits), Expect = 6.6e-09, P = 6.6e-09
Identities = 37/105 (35%), Positives = 57/105 (54%)
Query: 24 ILVFLTSCKQVKYVFEAFKKLRPGIPLMCLYGRMKQDRRMAIYAQFCE-KRSVLFCTDVA 82
+L+F V + E L G+ + ++G Q+ R F E K+ VL TDVA
Sbjct: 435 VLIFAEKKADVDAIHEYL--LLKGVEAVAIHGGKDQEERTKAIEAFREGKKDVLVATDVA 492
Query: 83 SRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYNSGGRSVLFL 127
S+GLDF A+ V+ D PE++ +Y+HR+GRT R + G + F+
Sbjct: 493 SKGLDF-PAIQHVINYDMPEEIENYVHRIGRTGRSGNTGIATTFI 536
>UNIPROTKB|Q9UJV9 [details] [associations]
symbol:DDX41 "Probable ATP-dependent RNA helicase DDX41"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005783 "endoplasmic reticulum" evidence=IEA] [GO:0035458
"cellular response to interferon-beta" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0051607 "defense response to virus"
evidence=IEA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IDA] [GO:0007275 "multicellular organismal development"
evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR001650 InterPro:IPR001878 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50158
PROSITE:PS51194 SMART:SM00343 SMART:SM00490 GO:GO:0005783
GO:GO:0007275 GO:GO:0005524 GO:GO:0006915 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0045944 GO:GO:0051607
GO:GO:0003723 GO:GO:0035458 GO:GO:0000398 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:CH471195
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG015893 KO:K13116 EMBL:AF195417 EMBL:AK001255
EMBL:AK027768 EMBL:AK315491 EMBL:BC015476 EMBL:AL137455
EMBL:BX641072 IPI:IPI00007208 PIR:T46269 RefSeq:NP_057306.2
UniGene:Hs.484288 PDB:2P6N PDBsum:2P6N ProteinModelPortal:Q9UJV9
SMR:Q9UJV9 IntAct:Q9UJV9 MINT:MINT-3081244 STRING:Q9UJV9
PhosphoSite:Q9UJV9 DMDM:20532370 PaxDb:Q9UJV9 PeptideAtlas:Q9UJV9
PRIDE:Q9UJV9 DNASU:51428 Ensembl:ENST00000507955 GeneID:51428
KEGG:hsa:51428 UCSC:uc003mhn.3 CTD:51428 GeneCards:GC05M176938
HGNC:HGNC:18674 HPA:HPA017911 MIM:608170 neXtProt:NX_Q9UJV9
PharmGKB:PA134908862 HOGENOM:HOG000268792 InParanoid:Q9UJV9
OrthoDB:EOG4CVG6K PhylomeDB:Q9UJV9 ChiTaRS:DDX41
EvolutionaryTrace:Q9UJV9 GenomeRNAi:51428 NextBio:54987
ArrayExpress:Q9UJV9 Bgee:Q9UJV9 CleanEx:HS_DDX41
Genevestigator:Q9UJV9 GermOnline:ENSG00000183258 Uniprot:Q9UJV9
Length = 622
Score = 164 (62.8 bits), Expect = 6.6e-09, P = 6.6e-09
Identities = 37/105 (35%), Positives = 57/105 (54%)
Query: 24 ILVFLTSCKQVKYVFEAFKKLRPGIPLMCLYGRMKQDRRMAIYAQFCE-KRSVLFCTDVA 82
+L+F V + E L G+ + ++G Q+ R F E K+ VL TDVA
Sbjct: 435 VLIFAEKKADVDAIHEYL--LLKGVEAVAIHGGKDQEERTKAIEAFREGKKDVLVATDVA 492
Query: 83 SRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYNSGGRSVLFL 127
S+GLDF A+ V+ D PE++ +Y+HR+GRT R + G + F+
Sbjct: 493 SKGLDF-PAIQHVINYDMPEEIENYVHRIGRTGRSGNTGIATTFI 536
>MGI|MGI:1920185 [details] [associations]
symbol:Ddx41 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 41"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0005783
"endoplasmic reticulum" evidence=IDA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0035458 "cellular response to
interferon-beta" evidence=IMP] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0051607 "defense
response to virus" evidence=IMP] [GO:0071013 "catalytic step 2
spliceosome" evidence=ISO] InterPro:IPR001650 InterPro:IPR001878
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS50158 PROSITE:PS51194 SMART:SM00343 SMART:SM00490
MGI:MGI:1920185 GO:GO:0005783 GO:GO:0005524 GO:GO:0005634
GO:GO:0008380 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0006397 GO:GO:0045944 GO:GO:0051607 GO:GO:0003723
GO:GO:0035458 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00620000087942 HOVERGEN:HBG015893
KO:K13116 OMA:KDQEERS CTD:51428 HOGENOM:HOG000268792
OrthoDB:EOG4CVG6K EMBL:AK156957 EMBL:BC011308 IPI:IPI00127071
RefSeq:NP_598820.2 UniGene:Mm.205045 ProteinModelPortal:Q91VN6
SMR:Q91VN6 IntAct:Q91VN6 STRING:Q91VN6 PhosphoSite:Q91VN6
PaxDb:Q91VN6 PRIDE:Q91VN6 Ensembl:ENSMUST00000021956 GeneID:72935
KEGG:mmu:72935 InParanoid:Q3U0E0 NextBio:337171 Bgee:Q91VN6
CleanEx:MM_DDX41 Genevestigator:Q91VN6
GermOnline:ENSMUSG00000021494 Uniprot:Q91VN6
Length = 622
Score = 164 (62.8 bits), Expect = 6.6e-09, P = 6.6e-09
Identities = 37/105 (35%), Positives = 57/105 (54%)
Query: 24 ILVFLTSCKQVKYVFEAFKKLRPGIPLMCLYGRMKQDRRMAIYAQFCE-KRSVLFCTDVA 82
+L+F V + E L G+ + ++G Q+ R F E K+ VL TDVA
Sbjct: 435 VLIFAEKKADVDAIHEYL--LLKGVEAVAIHGGKDQEERTKAIEAFREGKKDVLVATDVA 492
Query: 83 SRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYNSGGRSVLFL 127
S+GLDF A+ V+ D PE++ +Y+HR+GRT R + G + F+
Sbjct: 493 SKGLDF-PAIQHVINYDMPEEIENYVHRIGRTGRSGNTGIATTFI 536
>RGD|1311758 [details] [associations]
symbol:Ddx41 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 41"
species:10116 "Rattus norvegicus" [GO:0003677 "DNA binding"
evidence=IEA;ISO] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005783 "endoplasmic
reticulum" evidence=IEA;ISO] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0035458 "cellular response to interferon-beta"
evidence=IEA;ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0051607
"defense response to virus" evidence=IEA;ISO] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA;ISO] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR001650 InterPro:IPR001878
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00343 SMART:SM00490 RGD:1311758 GO:GO:0005783 GO:GO:0005524
GO:GO:0003677 GO:GO:0008270 GO:GO:0045944 GO:GO:0051607
GO:GO:0035458 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 EMBL:CH474032 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
HOVERGEN:HBG015893 KO:K13116 CTD:51428 HOGENOM:HOG000268792
OrthoDB:EOG4CVG6K EMBL:BC166825 IPI:IPI00565869
RefSeq:NP_001101516.1 UniGene:Rn.114971 SMR:B2RYL8
Ensembl:ENSRNOT00000018114 GeneID:314336 KEGG:rno:314336
UCSC:RGD:1311758 NextBio:667511 Genevestigator:B2RYL8
Uniprot:B2RYL8
Length = 622
Score = 164 (62.8 bits), Expect = 6.6e-09, P = 6.6e-09
Identities = 37/105 (35%), Positives = 57/105 (54%)
Query: 24 ILVFLTSCKQVKYVFEAFKKLRPGIPLMCLYGRMKQDRRMAIYAQFCE-KRSVLFCTDVA 82
+L+F V + E L G+ + ++G Q+ R F E K+ VL TDVA
Sbjct: 435 VLIFAEKKADVDAIHEYL--LLKGVEAVAIHGGKDQEERTKAIEAFREGKKDVLVATDVA 492
Query: 83 SRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYNSGGRSVLFL 127
S+GLDF A+ V+ D PE++ +Y+HR+GRT R + G + F+
Sbjct: 493 SKGLDF-PAIQHVINYDMPEEIENYVHRIGRTGRSGNTGIATTFI 536
>TAIR|locus:2075034 [details] [associations]
symbol:AT3G09720 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0009220
"pyrimidine ribonucleotide biosynthetic process" evidence=RCA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003723 EMBL:AC016661
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000242486 KO:K14779 OMA:NVMKQSG EMBL:BT005833
EMBL:AK227326 IPI:IPI00542757 RefSeq:NP_187583.2 UniGene:At.40050
ProteinModelPortal:Q84TG1 SMR:Q84TG1 STRING:Q84TG1 PaxDb:Q84TG1
PRIDE:Q84TG1 EnsemblPlants:AT3G09720.1 GeneID:820129
KEGG:ath:AT3G09720 KEGG:dosa:Os07t0647900-01 GeneFarm:1036
TAIR:At3g09720 InParanoid:Q84TG1 PhylomeDB:Q84TG1
ProtClustDB:CLSN2690529 Genevestigator:Q84TG1 GermOnline:AT3G09720
Uniprot:Q84TG1
Length = 541
Score = 163 (62.4 bits), Expect = 6.8e-09, P = 6.8e-09
Identities = 40/136 (29%), Positives = 70/136 (51%)
Query: 6 EQKLDMLWSFIKAHLNSKILVFLTSCKQVKYVFEAFK--KLRPGIPLMCLYGRMKQDRRM 63
E KL L LN +L+F+ S ++ K +++ K +R G+ ++ + R
Sbjct: 365 EGKLLALRQSFAESLNPPVLIFVQSKERAKELYDELKCENIRAGV----IHSDLPPGERE 420
Query: 64 AIYAQF-CEKRSVLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYNSGGR 122
QF ++ VL TDV +RG+DF K ++ V+ D P+ ++YIHR+GR+ R G
Sbjct: 421 NAVDQFRAGEKWVLIATDVIARGMDF-KGINCVINYDFPDSASAYIHRIGRSGRAGRSGE 479
Query: 123 SVLFLTPTEMKMLEKL 138
++ F T ++ L +
Sbjct: 480 AITFYTEQDVPFLRNI 495
>UNIPROTKB|J3KNN5 [details] [associations]
symbol:DDX41 "Probable ATP-dependent RNA helicase DDX41"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR001878 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00343 SMART:SM00490 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
OMA:KDQEERS HGNC:HGNC:18674 ChiTaRS:DDX41 EMBL:AC145098
Ensembl:ENST00000330503 Uniprot:J3KNN5
Length = 640
Score = 164 (62.8 bits), Expect = 6.9e-09, P = 6.9e-09
Identities = 37/105 (35%), Positives = 57/105 (54%)
Query: 24 ILVFLTSCKQVKYVFEAFKKLRPGIPLMCLYGRMKQDRRMAIYAQFCE-KRSVLFCTDVA 82
+L+F V + E L G+ + ++G Q+ R F E K+ VL TDVA
Sbjct: 453 VLIFAEKKADVDAIHEYL--LLKGVEAVAIHGGKDQEERTKAIEAFREGKKDVLVATDVA 510
Query: 83 SRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYNSGGRSVLFL 127
S+GLDF A+ V+ D PE++ +Y+HR+GRT R + G + F+
Sbjct: 511 SKGLDF-PAIQHVINYDMPEEIENYVHRIGRTGRSGNTGIATTFI 554
>UNIPROTKB|J9NZF6 [details] [associations]
symbol:DDX41 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR001878 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00343 SMART:SM00490 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 OMA:KDQEERS EMBL:AAEX03002959
Ensembl:ENSCAFT00000042923 Uniprot:J9NZF6
Length = 649
Score = 164 (62.8 bits), Expect = 7.0e-09, P = 7.0e-09
Identities = 37/105 (35%), Positives = 57/105 (54%)
Query: 24 ILVFLTSCKQVKYVFEAFKKLRPGIPLMCLYGRMKQDRRMAIYAQFCE-KRSVLFCTDVA 82
+L+F V + E L G+ + ++G Q+ R F E K+ VL TDVA
Sbjct: 462 VLIFAEKKADVDAIHEYL--LLKGVEAVAIHGGKDQEERTKAIEAFREGKKDVLVATDVA 519
Query: 83 SRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYNSGGRSVLFL 127
S+GLDF A+ V+ D PE++ +Y+HR+GRT R + G + F+
Sbjct: 520 SKGLDF-PAIQHVINYDMPEEIENYVHRIGRTGRSGNTGIATTFI 563
>TAIR|locus:2077592 [details] [associations]
symbol:AT3G06980 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0009507
"chloroplast" evidence=IDA] [GO:0006364 "rRNA processing"
evidence=RCA] [GO:0006399 "tRNA metabolic process" evidence=RCA]
[GO:0006655 "phosphatidylglycerol biosynthetic process"
evidence=RCA] [GO:0009658 "chloroplast organization" evidence=RCA]
[GO:0009793 "embryo development ending in seed dormancy"
evidence=RCA] [GO:0010103 "stomatal complex morphogenesis"
evidence=RCA] [GO:0016226 "iron-sulfur cluster assembly"
evidence=RCA] [GO:0019288 "isopentenyl diphosphate biosynthetic
process, mevalonate-independent pathway" evidence=RCA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0009507 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0006968
GO:GO:0003723 EMBL:AC016827 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K13179 EMBL:AJ296275 EMBL:AY048260 EMBL:AY113064
EMBL:BT002520 IPI:IPI00545954 RefSeq:NP_187354.1 UniGene:At.18753
ProteinModelPortal:Q8GUG7 SMR:Q8GUG7 IntAct:Q8GUG7 STRING:Q8GUG7
PaxDb:Q8GUG7 PRIDE:Q8GUG7 EnsemblPlants:AT3G06980.1 GeneID:819883
KEGG:ath:AT3G06980 KEGG:dosa:Os03t0108600-01 GeneFarm:1029
TAIR:At3g06980 HOGENOM:HOG000078675 InParanoid:Q8GUG7 OMA:ANCRSIS
PhylomeDB:Q8GUG7 ProtClustDB:CLSN2915517 Genevestigator:Q8GUG7
GermOnline:AT3G06980 Uniprot:Q8GUG7
Length = 781
Score = 165 (63.1 bits), Expect = 7.1e-09, P = 7.1e-09
Identities = 45/153 (29%), Positives = 83/153 (54%)
Query: 6 EQKLDMLWSFIKAHLNSKILVF---LTSCKQVKYVFEAFKKLRPGIPLMCLYGRMKQDRR 62
+ K L ++ + SK ++F + +C++V+ +F+ + + ++ + + Q+ R
Sbjct: 620 QNKKTALLQIMEENPVSKTIIFCNKIETCRKVENIFKRVDRKERQLHVLPFHAALSQESR 679
Query: 63 MAIYAQFC----EKRSV-LFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARY 117
+ +F E+ S+ L CTD ASRG+DF+ VD VV D P D + Y+ RVGRTAR
Sbjct: 680 LTNMQEFTSSQPEENSLFLVCTDRASRGIDFS-GVDHVVLFDFPRDPSEYVRRVGRTARG 738
Query: 118 NSG-GRSVLFLTPTEMKMLEKL--REAK-IPIH 146
G G++ +F+ ++ + ++ R K P+H
Sbjct: 739 ARGKGKAFIFVVGKQVGLARRIIERNEKGHPVH 771
>DICTYBASE|DDB_G0293168 [details] [associations]
symbol:ddx17 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008186 "RNA-dependent ATPase
activity" evidence=ISS] [GO:0006396 "RNA processing" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA;ISS] [GO:0003724 "RNA helicase
activity" evidence=ISS] [GO:0003723 "RNA binding" evidence=IEA;ISS]
[GO:0042254 "ribosome biogenesis" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
dictyBase:DDB_G0293168 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GenomeReviews:CM000155_GR GO:GO:0000184 GO:GO:0003723 GO:GO:0006396
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0008026 eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014
PROSITE:PS51195 EMBL:AAFI02000199 KO:K12823 GO:GO:0008186
RefSeq:XP_629279.1 HSSP:P09052 ProteinModelPortal:Q54CE0
PRIDE:Q54CE0 EnsemblProtists:DDB0233431 GeneID:8629001
KEGG:ddi:DDB_G0293168 Uniprot:Q54CE0
Length = 785
Score = 165 (63.1 bits), Expect = 7.2e-09, P = 7.2e-09
Identities = 53/167 (31%), Positives = 81/167 (48%)
Query: 7 QKLDMLWSFI-KAHLNSKILVFLTSCKQVKYVFEAFKKLRPGIPLMCLYGRMKQDRRMAI 65
+K + + SF+ + K++VF + K V + + G + ++G Q R +
Sbjct: 614 EKKERMLSFLGSVGRDEKVIVFAETRKGVDDLQRVLQF--SGFKSIGIHGNKSQPERDFV 671
Query: 66 YAQFCEKR-SVLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYNSGGRSV 124
+QF ++ TDVASRGLD K + +VV D P + YIHR+GRTAR + G S
Sbjct: 672 LSQFKNGMVPIMIATDVASRGLDI-KDIKYVVNYDFPNTIEVYIHRIGRTARAGASGVSY 730
Query: 125 LFLTPTEMKM----LEKLREAK--IPIHF--------TKANTKRLQP 157
LT ++ ++ L EAK IPI T +NTK+ P
Sbjct: 731 SLLTTDNARLANELIKVLTEAKQKIPIELSNLSVTPSTSSNTKKFSP 777
>POMBASE|SPAC17G6.14c [details] [associations]
symbol:uap56 "ATP-dependent RNA helicase Uap56"
species:4896 "Schizosaccharomyces pombe" [GO:0000346 "transcription
export complex" evidence=ISO] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IGI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005681 "spliceosomal complex" evidence=ISO]
[GO:0006406 "mRNA export from nucleus" evidence=ISO] [GO:0008380
"RNA splicing" evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 PomBase:SPAC17G6.14c GO:GO:0005524 EMBL:CU329670
GO:GO:0008380 GenomeReviews:CU329670_GR GO:GO:0006397 GO:GO:0005681
GO:GO:0003723 GO:GO:0006406 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 KO:K12812 GO:GO:0000346
OrthoDB:EOG4H49C6 EMBL:D89270 PIR:T37846 PIR:T43199
RefSeq:NP_594261.1 ProteinModelPortal:O13792 SMR:O13792
STRING:O13792 EnsemblFungi:SPAC17G6.14c.1 GeneID:2542433
KEGG:spo:SPAC17G6.14c OMA:DAVEFNQ NextBio:20803490 Uniprot:O13792
Length = 434
Score = 161 (61.7 bits), Expect = 7.5e-09, P = 7.5e-09
Identities = 38/131 (29%), Positives = 74/131 (56%)
Query: 22 SKILVFLTSCKQVKYVFEAFKKLRP-GIPLMCLYGRMKQDRRMAIYAQFCE-KRSVLFCT 79
+++++F+ K V E + LR P +C++G + Q+ R+ Y F + + + T
Sbjct: 296 NQVVIFV---KSVSRANELDRLLRECNFPSICIHGGLPQEERIKRYKAFKDFDKRICVAT 352
Query: 80 DVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYNSGGRSVLFLTPTE-MKMLEKL 138
DV RG+D + V+ V+ D P+ SY+HRVGR R+ + G ++ F + E ++L+K+
Sbjct: 353 DVFGRGIDIER-VNIVINYDMPDSPDSYLHRVGRAGRFGTKGLAITFSSSEEDSQILDKI 411
Query: 139 REAKIPIHFTK 149
+E + ++ T+
Sbjct: 412 QE-RFEVNITE 421
>TIGR_CMR|GSU_0522 [details] [associations]
symbol:GSU_0522 "ATP-dependent RNA helicase RhlB"
species:243231 "Geobacter sulfurreducens PCA" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0006401
"RNA catabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE017180 GenomeReviews:AE017180_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807 KO:K03732
RefSeq:NP_951580.1 ProteinModelPortal:Q74FT4 GeneID:2685920
KEGG:gsu:GSU0522 PATRIC:22023799 OMA:LAYEFMN ProtClustDB:CLSK827899
BioCyc:GSUL243231:GH27-482-MONOMER Uniprot:Q74FT4
Length = 443
Score = 161 (61.7 bits), Expect = 7.8e-09, P = 7.8e-09
Identities = 39/148 (26%), Positives = 74/148 (50%)
Query: 6 EQKLDMLWSFIKAHLNSKILVFLTSCKQVKYVFEAFKKLRPGIPLMCLYGRMKQDRRMAI 65
++K +L ++ + ++F+ + ++ +++ E P + G ++Q +R+ I
Sbjct: 231 KEKFPLLLGLLRKEGMERTMIFVNTKREAEFLDERLNA--NDFPCRVISGDVEQRKRLKI 288
Query: 66 YAQFCE-KRSVLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYNSGGRSV 124
F K ++ TDVASRGL + V V+ D P+D Y+HR+GRTAR + G+++
Sbjct: 289 LEDFKSGKLPIMIATDVASRGLHID-GVSHVINYDLPQDAEDYVHRIGRTARAGAEGKAI 347
Query: 125 LFLTPTEMKMLEKLREA---KIPIHFTK 149
LE + E KIP+ + +
Sbjct: 348 SMADEDGAFHLEAIHEYIKDKIPVEWAE 375
>UNIPROTKB|Q96GQ7 [details] [associations]
symbol:DDX27 "Probable ATP-dependent RNA helicase DDX27"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
CTD:55661 HOVERGEN:HBG106162 KO:K13181 OMA:TRTFTDH EMBL:AY044431
EMBL:AF336851 EMBL:AL049766 EMBL:AL357560 EMBL:BC009304
EMBL:BC011927 EMBL:BC016060 EMBL:BC126287 EMBL:BC130275
EMBL:BC144125 EMBL:AK022979 EMBL:AK000603 EMBL:AF193054
EMBL:AF161377 IPI:IPI00293078 RefSeq:NP_060365.7 UniGene:Hs.129261
UniGene:Hs.65234 ProteinModelPortal:Q96GQ7 SMR:Q96GQ7 IntAct:Q96GQ7
MINT:MINT-1420816 STRING:Q96GQ7 PhosphoSite:Q96GQ7 DMDM:29427946
SWISS-2DPAGE:Q96GQ7 PaxDb:Q96GQ7 PeptideAtlas:Q96GQ7 PRIDE:Q96GQ7
DNASU:55661 Ensembl:ENST00000371764 GeneID:55661 KEGG:hsa:55661
UCSC:uc002xuh.3 GeneCards:GC20P047835 HGNC:HGNC:15837 HPA:HPA047087
neXtProt:NX_Q96GQ7 PharmGKB:PA27213 InParanoid:Q96GQ7
OrthoDB:EOG4NVZJV PhylomeDB:Q96GQ7 ChiTaRS:DDX27 GenomeRNAi:55661
NextBio:60399 ArrayExpress:Q96GQ7 Bgee:Q96GQ7 CleanEx:HS_DDX27
Genevestigator:Q96GQ7 GermOnline:ENSG00000124228 Uniprot:Q96GQ7
Length = 796
Score = 168 (64.2 bits), Expect = 8.2e-09, Sum P(2) = 8.2e-09
Identities = 38/101 (37%), Positives = 60/101 (59%)
Query: 47 GIPLMCLYGRMKQDRRMAIYAQFCEKR-SVLFCTDVASRGLDFNKAVDWVVQVDCPEDVA 105
G+ + L+G + Q +R+ +F +++ +L TDVA+RGLD + V V+ P +
Sbjct: 487 GLQVGELHGNLSQTQRLEALRRFKDEQIDILVATDVAARGLDI-EGVKTVINFTMPNTIK 545
Query: 106 SYIHRVGRTARYNSGGRSVLFLTPTEMKMLEKL-REAKIPI 145
Y+HRVGRTAR GRSV + E KML+++ + AK P+
Sbjct: 546 HYVHRVGRTARAGRAGRSVSLVGEDERKMLKEIVKAAKAPV 586
Score = 41 (19.5 bits), Expect = 8.2e-09, Sum P(2) = 8.2e-09
Identities = 16/82 (19%), Positives = 39/82 (47%)
Query: 225 KGKMVPVKPVL---DNAEKEDKLMISREKLLPDNFTEENVDRDILETKDIEDEGKADLLE 281
K +++P +L D EK +K + + +L + + + I K + ++GK +++
Sbjct: 587 KARILPQDVILKFRDKIEKMEKDVYAVLQLEAEEKEMQQSEAQINTAKRLLEKGKEAVVQ 646
Query: 282 DVMRATRVKKNKKLKINVHRPL 303
+ R+ K ++ K + + L
Sbjct: 647 EPERSWFQTKEERKKEKIAKAL 668
>CGD|CAL0001638 [details] [associations]
symbol:FAL1 species:5476 "Candida albicans" [GO:0005730
"nucleolus" evidence=IEA] [GO:0097078 "FAl1-SGD1 complex"
evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 CGD:CAL0001638 GO:GO:0005524 GO:GO:0005730
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:AACQ01000041 EMBL:AACQ01000040 GO:GO:0006364 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 EMBL:AJ250879
RefSeq:XP_718509.1 RefSeq:XP_718592.1 ProteinModelPortal:Q5A9Z6
SMR:Q5A9Z6 GeneID:3639739 GeneID:3639839 KEGG:cal:CaO19.10024
KEGG:cal:CaO19.2488 KO:K13025 Uniprot:Q5A9Z6
Length = 399
Score = 160 (61.4 bits), Expect = 8.2e-09, P = 8.2e-09
Identities = 43/140 (30%), Positives = 70/140 (50%)
Query: 8 KLDMLWSFIKAHLNSKILVFLTSCKQVKYVFEAFKKLRPGIPLMCLYGRMKQDRRMAIYA 67
K D L ++ ++F + +V ++ + KK ++ ++G MKQD R +I
Sbjct: 252 KFDTLCDLYDNLTITQAVIFCNTKLKVNWLADQMKK--QNFTVVAMHGDMKQDERDSIMN 309
Query: 68 QFCEKRS-VLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYNSGGRSVLF 126
F S VL TDV +RG+D + V V+ D P D +YIHR+GR+ R+ G ++
Sbjct: 310 DFRRGNSRVLISTDVWARGIDVQQ-VSLVINYDLPTDKENYIHRIGRSGRFGRKGTAINL 368
Query: 127 LTPTE---MKMLEKLREAKI 143
+T + +K EK KI
Sbjct: 369 ITKDDVVTLKEFEKYYSTKI 388
>UNIPROTKB|Q4K4K3 [details] [associations]
symbol:dbpA "ATP-independent RNA helicase DbpA"
species:220664 "Pseudomonas protegens Pf-5" [GO:0003724 "RNA
helicase activity" evidence=ISS] [GO:0042254 "ribosome biogenesis"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
GO:GO:0042254 EMBL:CP000076 GenomeReviews:CP000076_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268809 KO:K05591 ProtClustDB:PRK11776
InterPro:IPR005580 Pfam:PF03880 OMA:THEKSTI RefSeq:YP_262830.1
ProteinModelPortal:Q4K4K3 STRING:Q4K4K3 GeneID:3480144
KEGG:pfl:PFL_5772 PATRIC:19881049
BioCyc:PFLU220664:GIX8-5812-MONOMER Uniprot:Q4K4K3
Length = 461
Score = 161 (61.7 bits), Expect = 8.5e-09, P = 8.5e-09
Identities = 39/112 (34%), Positives = 63/112 (56%)
Query: 47 GIPLMCLYGRMKQDRRMAIYAQFCEKR-SVLFCTDVASRGLDFNKAVDWVVQVDCPEDVA 105
GI + L+G ++Q R + A F + SVL TDVA+RGLD + A+D V+ V+ D
Sbjct: 268 GISAVGLHGDLEQRDRDQVLAMFANRSTSVLVATDVAARGLDID-ALDMVINVELARDSE 326
Query: 106 SYIHRVGRTARYNSGGRSVLFLTPTEMKMLEKLREA-KIPIHFTKANTKRLQ 156
+IHRVGRT R G +V + P+E + + + K P+++ + + + Q
Sbjct: 327 IHIHRVGRTGRAGEKGIAVSLVAPSEAHRAQAIEQLQKAPLNWDQVDNLKSQ 378
>ZFIN|ZDB-GENE-031030-3 [details] [associations]
symbol:ddx49 "DEAD (Asp-Glu-Ala-Asp) box polypeptide
49" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-031030-3 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 KO:K14778
HOVERGEN:HBG100512 CTD:54555 EMBL:BC047834 IPI:IPI00551936
RefSeq:NP_938179.1 UniGene:Dr.77634 ProteinModelPortal:Q7ZUT9
STRING:Q7ZUT9 GeneID:386632 KEGG:dre:386632 InParanoid:Q7ZUT9
NextBio:20813961 ArrayExpress:Q7ZUT9 Uniprot:Q7ZUT9
Length = 468
Score = 161 (61.7 bits), Expect = 8.7e-09, P = 8.7e-09
Identities = 41/131 (31%), Positives = 67/131 (51%)
Query: 11 MLWSFIKAHLNSKILVFLTSCKQVKYVFEAFKKLRPGIPLMCLYGRMKQDRRMAIYAQFC 70
++ +F H + I++F +CK + + ++ P + L+ MKQ +R A A+F
Sbjct: 238 LIQTFQDEHDDWSIIIFTNTCKSCQILTMMLREFN--FPTISLHSMMKQRQRFANLAKFK 295
Query: 71 EKR-SVLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYNSGGRSVLFLTP 129
+L TDVA+RGLD V V+ + P YIHRVGRTAR G S+ +T
Sbjct: 296 SNVFKILIATDVAARGLDI-PTVQVVINHNTPGLPKIYIHRVGRTARAGRNGVSITLVTQ 354
Query: 130 TEMKMLEKLRE 140
++ ++ + E
Sbjct: 355 YDIHLINAIEE 365
>TAIR|locus:2035741 [details] [associations]
symbol:RH20 "RNA helicase 20" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA;ISS]
[GO:0005829 "cytosol" evidence=IDA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0000184 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823
EMBL:AC073944 EMBL:AY062745 EMBL:AY128786 EMBL:AJ010470
IPI:IPI00528901 PIR:B96593 PIR:T51345 RefSeq:NP_175911.1
UniGene:At.20425 ProteinModelPortal:Q9C718 SMR:Q9C718 PaxDb:Q9C718
PRIDE:Q9C718 ProMEX:Q9C718 EnsemblPlants:AT1G55150.1 GeneID:841958
KEGG:ath:AT1G55150 GeneFarm:937 TAIR:At1g55150 InParanoid:Q9C718
OMA:CANHNIL PhylomeDB:Q9C718 ProtClustDB:CLSN2682455
Genevestigator:Q9C718 GermOnline:AT1G55150 Uniprot:Q9C718
Length = 501
Score = 161 (61.7 bits), Expect = 9.9e-09, P = 9.9e-09
Identities = 43/140 (30%), Positives = 75/140 (53%)
Query: 2 IVPLEQKLDMLWSFIKAHLN-SKILVFLTSCKQVKYVFEAFKKLR-PGIPLMCLYGRMKQ 59
++ QK + L ++ ++ S+ILVFL + K + ++LR G P + ++G Q
Sbjct: 324 VISESQKYNKLVKLLEDIMDGSRILVFLDTKKGCDQIT---RQLRMDGWPALSIHGDKSQ 380
Query: 60 DRRMAIYAQFCEKRS-VLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYN 118
R + ++F +S ++ TDVA+RGLD K V +V+ D P + Y+HR+GRT R
Sbjct: 381 AERDWVLSEFRSGKSPIMTATDVAARGLDV-KDVKYVINYDFPGSLEDYVHRIGRTGRAG 439
Query: 119 SGGRSVLFLTPTEMKMLEKL 138
+ G + F T + ++L
Sbjct: 440 AKGTAYTFFTVANARFAKEL 459
>UNIPROTKB|H0Y400 [details] [associations]
symbol:DDX39B "Spliceosome RNA helicase DDX39B"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0004386 EMBL:AL662847 EMBL:AL662801
EMBL:CR753892 EMBL:BX001040 EMBL:BX248516 EMBL:BX927320
EMBL:CR753820 EMBL:CR753864 HGNC:HGNC:13917 ChiTaRS:DDX39B
EMBL:CR942185 EMBL:CT009531 Ensembl:ENST00000412386
Ensembl:ENST00000417023 Ensembl:ENST00000417995
Ensembl:ENST00000422243 Ensembl:ENST00000428107
Ensembl:ENST00000433293 Ensembl:ENST00000445602
Ensembl:ENST00000455400 Uniprot:H0Y400
Length = 187
Score = 138 (53.6 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 30/121 (24%), Positives = 68/121 (56%)
Query: 22 SKILVFLTSCKQVKYVFEAFKKLRPGIPLMCLYGRMKQDRRMAIYAQFCE-KRSVLFCTD 80
+++++F+ S ++ + + + P + ++ M Q+ R++ Y QF + +R +L T+
Sbjct: 52 NQVVIFVKSVQRCIALAQLL--VEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATN 109
Query: 81 VASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYNSGGRSVLFLTP-TEMKMLEKLR 139
+ RG+D + V+ D PED +Y+HRV R R+ + G ++ F++ + K+L ++
Sbjct: 110 LFGRGMDIER-VNIAFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDVQ 168
Query: 140 E 140
+
Sbjct: 169 D 169
>UNIPROTKB|Q0DVX2 [details] [associations]
symbol:LOC_Os03g01830 "DEAD-box ATP-dependent RNA helicase
50" species:39947 "Oryza sativa Japonica Group" [GO:0003724 "RNA
helicase activity" evidence=IDA] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=IDA] [GO:0006968 "cellular defense
response" evidence=IDA] [GO:0009817 "defense response to fungus,
incompatible interaction" evidence=IDA] [GO:0071369 "cellular
response to ethylene stimulus" evidence=IEP] [GO:0071395 "cellular
response to jasmonic acid stimulus" evidence=IEP] [GO:0071446
"cellular response to salicylic acid stimulus" evidence=IEP]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0009507 GO:GO:0071395 GO:GO:0006968 EMBL:DP000009
EMBL:AP008209 GO:GO:0009817 GO:GO:0003723 EMBL:AC113930
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:CM000140
GO:GO:0071369 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K13179 GO:GO:0071446 HOGENOM:HOG000078675
EMBL:AK065776 RefSeq:NP_001048702.1 UniGene:Os.43898
ProteinModelPortal:Q0DVX2 STRING:Q0DVX2
EnsemblPlants:LOC_Os03g01830.1 GeneID:4331339 KEGG:osa:4331339
Gramene:Q0DVX2 OMA:PSHIQAM ProtClustDB:CLSN2684806 Uniprot:Q0DVX2
Length = 641
Score = 162 (62.1 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 42/135 (31%), Positives = 72/135 (53%)
Query: 23 KILVF---LTSCKQVKYVFEAFKKLRPGIPLMCLYGRMKQDRRMAIYAQFCEKRSV---- 75
K ++F + +C++V+ + I ++ + + Q +R+A +F K++
Sbjct: 503 KTIIFCNKIETCRKVENALRRVDRKASQIKVLPFHAALDQQQRIANIKEFLNKQTADSMF 562
Query: 76 LFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYNSG-GRSVLFLTPTEMKM 134
L CTD ASRG+DF V+ VV D P D + Y+ RVGRTAR SG G++ +F ++ +
Sbjct: 563 LVCTDRASRGIDFAN-VNHVVLFDYPRDPSEYVRRVGRTARGASGNGKAFVFAVGKQVSL 621
Query: 135 LEKLREAKI---PIH 146
++ E I P+H
Sbjct: 622 ARRVMERNIKGHPLH 636
>DICTYBASE|DDB_G0274325 [details] [associations]
symbol:ddx52 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0006200 "ATP
catabolic process" evidence=ISS] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 dictyBase:DDB_G0274325 GO:GO:0005524
GO:GO:0005730 GenomeReviews:CM000151_GR GO:GO:0016887 GO:GO:0003723
EMBL:AAFI02000012 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HSSP:P10081 KO:K14779 RefSeq:XP_643949.1
ProteinModelPortal:Q86IZ9 EnsemblProtists:DDB0234211 GeneID:8619377
KEGG:ddi:DDB_G0274325 OMA:NGITSHE Uniprot:Q86IZ9
Length = 668
Score = 161 (61.7 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 45/137 (32%), Positives = 70/137 (51%)
Query: 6 EQKLDMLWSFIKAHLNSKILVFLTSCKQVKYVFEAFKKLRPGIPLMCLYGRMKQDRRMAI 65
E KL + I+ L IL+F S ++ +F+ + GI + ++ Q +R I
Sbjct: 425 EGKLLAVRQLIQKGLEPPILIFTQSKERAHDLFQEL--IFDGINVDVIHSERTQFQRDTI 482
Query: 66 YAQF-CEKRSVLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYNSGGRSV 124
+F K VL CT++ +RG+DF K V++V+ D P +ASYIHR+GRT R G +
Sbjct: 483 VKKFRMGKIWVLICTELMARGMDF-KGVNFVINFDFPHTLASYIHRIGRTGRAGRPGVAY 541
Query: 125 LFLTPTEMKMLEKLREA 141
T + ML + A
Sbjct: 542 TLYTDADTPMLPTIVHA 558
Score = 45 (20.9 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 9/22 (40%), Positives = 14/22 (63%)
Query: 405 KKAKIYFDSDSDNDNDERKQNK 426
KK K + ++ N+N ERKQ +
Sbjct: 639 KKRKSFNNNGEKNNNPERKQKQ 660
Score = 41 (19.5 bits), Expect = 3.0e-08, Sum P(2) = 3.0e-08
Identities = 8/30 (26%), Positives = 21/30 (70%)
Query: 402 GRRKKAKIYFDSDSDNDNDERKQNK-DDNG 430
G ++K+ +++++N+ND +K+ ++NG
Sbjct: 619 GDQQKSNENNNNNNNNNNDNKKRKSFNNNG 648
>UNIPROTKB|Q8EI96 [details] [associations]
symbol:srmB "ATP-dependent RNA helicase SrmB"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 OMA:PLAMDQR
HOGENOM:HOG000268807 KO:K05590 ProtClustDB:PRK11192
RefSeq:NP_716576.1 ProteinModelPortal:Q8EI96 GeneID:1168793
KEGG:son:SO_0947 PATRIC:23521551 Uniprot:Q8EI96
Length = 420
Score = 159 (61.0 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 39/134 (29%), Positives = 71/134 (52%)
Query: 6 EQKLDMLWSFIKAHLNSKILVFLTSCKQVKYVFEAFKKLRPGIPLMCLYGRMKQDRRMAI 65
+ K +L +K + +VF+ + + V E + L+ GIP + G M+Q +R
Sbjct: 230 DHKFALLCHLLKQEDVKRAIVFVKT-RDVVSSLEG-QLLQAGIPCAFMRGDMEQKKRFQA 287
Query: 66 YAQFCEKR-SVLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYNSGGRSV 124
++F + +VL TDVA+RG+D + + V+ D P +YIHR+GRT R + G ++
Sbjct: 288 LSRFTKGEVNVLLATDVAARGIDIDD-ISHVINFDMPRSADTYIHRIGRTGRAGAKGTAI 346
Query: 125 LFLTPTEMKMLEKL 138
+M+++ K+
Sbjct: 347 SLAEAHDMRIVGKI 360
>TIGR_CMR|SO_0947 [details] [associations]
symbol:SO_0947 "ATP-dependent RNA helicase SrmB"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 OMA:PLAMDQR
HOGENOM:HOG000268807 KO:K05590 ProtClustDB:PRK11192
RefSeq:NP_716576.1 ProteinModelPortal:Q8EI96 GeneID:1168793
KEGG:son:SO_0947 PATRIC:23521551 Uniprot:Q8EI96
Length = 420
Score = 159 (61.0 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 39/134 (29%), Positives = 71/134 (52%)
Query: 6 EQKLDMLWSFIKAHLNSKILVFLTSCKQVKYVFEAFKKLRPGIPLMCLYGRMKQDRRMAI 65
+ K +L +K + +VF+ + + V E + L+ GIP + G M+Q +R
Sbjct: 230 DHKFALLCHLLKQEDVKRAIVFVKT-RDVVSSLEG-QLLQAGIPCAFMRGDMEQKKRFQA 287
Query: 66 YAQFCEKR-SVLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYNSGGRSV 124
++F + +VL TDVA+RG+D + + V+ D P +YIHR+GRT R + G ++
Sbjct: 288 LSRFTKGEVNVLLATDVAARGIDIDD-ISHVINFDMPRSADTYIHRIGRTGRAGAKGTAI 346
Query: 125 LFLTPTEMKMLEKL 138
+M+++ K+
Sbjct: 347 SLAEAHDMRIVGKI 360
>UNIPROTKB|I3L976 [details] [associations]
symbol:DDX47 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008380 "RNA splicing" evidence=IEA] [GO:0006915
"apoptotic process" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0006915
GO:GO:0005730 GO:GO:0008380 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00670000098028
OMA:IFIPSKF Ensembl:ENSSSCT00000025539 Uniprot:I3L976
Length = 456
Score = 163 (62.4 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 42/117 (35%), Positives = 60/117 (51%)
Query: 1 MIVPLEQKLDMLWSFIKAHLNSKILVFLTSCKQVKYVFEAFKKLRPGIPLMCLYGRMKQD 60
+ +P + K L + + ++F ++C + + L G + L+G+M Q
Sbjct: 242 LFIPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNL--GFTAIPLHGQMSQS 299
Query: 61 RRMAIYAQFCEK-RSVLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTAR 116
+R+ +F K RS+L TDVASRGLD VD VV D P YIHRVGRTAR
Sbjct: 300 KRLGSLNKFKAKARSILLATDVASRGLDIPH-VDVVVNFDIPTHSKDYIHRVGRTAR 355
Score = 37 (18.1 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 5/16 (31%), Positives = 13/16 (81%)
Query: 420 DERKQNKDDNGPNIDS 435
+++K++++D G N D+
Sbjct: 420 EKKKRSREDTGDNDDT 435
>UNIPROTKB|F1NAH6 [details] [associations]
symbol:LOC100859810 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0035458 "cellular response to interferon-beta" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0051607 "defense response
to virus" evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] InterPro:IPR001650 InterPro:IPR001878
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00343 SMART:SM00490 GO:GO:0005783 GO:GO:0005524
GO:GO:0003677 GO:GO:0008270 GO:GO:0045944 GO:GO:0035458
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 OMA:KDQEERS EMBL:AADN02028748
EMBL:AADN02028749 EMBL:AADN02068652 IPI:IPI00576331
Ensembl:ENSGALT00000004794 Uniprot:F1NAH6
Length = 607
Score = 161 (61.7 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 36/105 (34%), Positives = 57/105 (54%)
Query: 24 ILVFLTSCKQVKYVFEAFKKLRPGIPLMCLYGRMKQDRRMAIYAQFCE-KRSVLFCTDVA 82
+L+F V + E L G+ + ++G Q+ R F + K+ VL TDVA
Sbjct: 431 VLIFAEKKADVDAIHEYL--LLKGVEAVAIHGGKDQEERTKAIEAFRDGKKDVLVATDVA 488
Query: 83 SRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYNSGGRSVLFL 127
S+GLDF A+ V+ D PE++ +Y+HR+GRT R + G + F+
Sbjct: 489 SKGLDF-PAIQHVINYDMPEEIENYVHRIGRTGRSGNTGIATTFI 532
>WB|WBGene00017162 [details] [associations]
symbol:ddx-23 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0002009 "morphogenesis of an
epithelium" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0040035 "hermaphrodite
genitalia development" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0042127 "regulation of cell proliferation"
evidence=IMP] [GO:0040020 "regulation of meiosis" evidence=IMP]
[GO:0010172 "embryonic body morphogenesis" evidence=IMP]
[GO:0048589 "developmental growth" evidence=IMP] [GO:0007281 "germ
cell development" evidence=IMP] [GO:0005634 "nucleus" evidence=IDA]
[GO:0040021 "hermaphrodite germ-line sex determination"
evidence=IMP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0009792 GO:GO:0002009 GO:GO:0002119 GO:GO:0040011
GO:GO:0003676 GO:GO:0042127 GO:GO:0040035 GO:GO:0007281
GO:GO:0048589 EMBL:FO080705 GO:GO:0010172 GO:GO:0040020
GeneTree:ENSGT00690000102171 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K12858 HSSP:Q58083 HOGENOM:HOG000268796
OMA:PIRNWKE GO:GO:0040021 RefSeq:NP_498260.2
ProteinModelPortal:Q95QN2 SMR:Q95QN2 STRING:Q95QN2 PaxDb:Q95QN2
EnsemblMetazoa:F01F1.7 GeneID:175818 KEGG:cel:CELE_F01F1.7
CTD:175818 WormBase:F01F1.7 InParanoid:Q95QN2 NextBio:889790
Uniprot:Q95QN2
Length = 730
Score = 162 (62.1 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 42/143 (29%), Positives = 69/143 (48%)
Query: 2 IVPLEQKLDMLWSFIKAHLNSKILVFLTSCKQVKYVFEAFKKLRPGIPLMCLYGRMKQDR 61
+VP ++K L +++ I++F+ K + + KL G L+G QD+
Sbjct: 554 MVPEDRKRKKLVEVLESQFQPPIIIFVNQKKGADMLSKGLTKL--GFKPTVLHGGKGQDQ 611
Query: 62 RMAIYAQFCEKRS-VLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYNSG 120
R E S +L TDVA RG+D K V V+ D + + Y HR+GRT R
Sbjct: 612 REYALQALKEGTSDILVATDVAGRGIDV-KDVSLVLNYDMAKSIEDYTHRIGRTGRAGKH 670
Query: 121 GRSVLFLTPTEMKMLEKLREAKI 143
G+++ FLTP + + L++ +
Sbjct: 671 GKAITFLTPDDTAVYFDLKQVLV 693
>TAIR|locus:2147987 [details] [associations]
symbol:UAP56a "homolog of human UAP56 a" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA;ISS] [GO:0005730 "nucleolus" evidence=IDA] [GO:0046686
"response to cadmium ion" evidence=IEP] [GO:0005829 "cytosol"
evidence=RCA] [GO:0009506 "plasmodesma" evidence=IDA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0009506
GO:GO:0005524 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046686
GO:GO:0005730 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 EMBL:AL360314 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 EMBL:AJ010466 EMBL:AY052303
EMBL:BT001052 EMBL:AK221273 EMBL:AK221708 EMBL:AK226428
IPI:IPI00760330 IPI:IPI00760336 IPI:IPI00760344 PIR:T51343
RefSeq:NP_568244.2 RefSeq:NP_568245.1 UniGene:At.49007
UniGene:At.73904 ProteinModelPortal:Q56XG6 SMR:Q56XG6 IntAct:Q56XG6
STRING:Q56XG6 PRIDE:Q56XG6 EnsemblPlants:AT5G11170.1
EnsemblPlants:AT5G11200.1 GeneID:830986 GeneID:830990
KEGG:ath:AT5G11170 KEGG:ath:AT5G11200 GeneFarm:932 TAIR:At5g11170
InParanoid:Q56XG6 PhylomeDB:Q56XG6 ProtClustDB:CLSN2689601
Genevestigator:Q56XG6 Uniprot:Q56XG6
Length = 427
Score = 158 (60.7 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 35/122 (28%), Positives = 69/122 (56%)
Query: 22 SKILVFLTSCKQVKYVFEAFKKL-RPGIPLMCLYGRMKQDRRMAIYAQFCE-KRSVLFCT 79
+++++F+ K V E K L P +C++ M Q+ R+ Y F E + +L T
Sbjct: 289 NQVVIFV---KSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKSFKEGHKRILVAT 345
Query: 80 DVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYNSGGRSVLFL-TPTEMKMLEKL 138
D+ RG+D + V+ V+ D P+ +Y+HRVGR R+ + G ++ F+ + ++ ++L ++
Sbjct: 346 DLVGRGIDIER-VNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVASASDSEVLNQV 404
Query: 139 RE 140
+E
Sbjct: 405 QE 406
>UNIPROTKB|I3LHW0 [details] [associations]
symbol:I3LHW0 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR004087 InterPro:IPR004088 InterPro:IPR011545
Pfam:PF00013 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS50084 PROSITE:PS51194 SMART:SM00322 SMART:SM00490
GO:GO:0005524 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095174 Ensembl:ENSSSCT00000032137 OMA:FESQIMK
Uniprot:I3LHW0
Length = 621
Score = 160 (61.4 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 46/142 (32%), Positives = 74/142 (52%)
Query: 1 MIVPLEQKLDMLWSFIKA-HLNSKILVFLTSCKQVKYVFEAFKKLRPGIPLMCLYG-RMK 58
+I E+K + F+++ K++VF+ S K + + ++ GIP+ L+G R +
Sbjct: 439 IITTEEEKRSLFQEFLQSLSPKDKVIVFV-SRKLIADDLSSDLSIQ-GIPVQSLHGDREQ 496
Query: 59 QDRRMAIYAQFCEKRSVLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYN 118
DR A+ K +L TD+ASRGLD + V V + P ++ Y+HRVGRT R
Sbjct: 497 SDRERALDDFKTGKVKILIATDLASRGLDVSD-VTHVFNYNFPRNIEEYVHRVGRTGRAG 555
Query: 119 SGGRSVLFLTPTEMKMLEKLRE 140
G SV +T + K+ +L E
Sbjct: 556 KMGESVTLMTQDDWKVAGELIE 577
>UNIPROTKB|F1SQ03 [details] [associations]
symbol:LOC100524536 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR004087 InterPro:IPR004088 InterPro:IPR011545
Pfam:PF00013 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS50084 PROSITE:PS51194 SMART:SM00322 SMART:SM00490
GO:GO:0005524 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
OMA:GLKSICI EMBL:CU927956 RefSeq:XP_003135023.1
ProteinModelPortal:F1SQ03 Ensembl:ENSSSCT00000013311
GeneID:100524536 Uniprot:F1SQ03
Length = 630
Score = 160 (61.4 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 46/142 (32%), Positives = 74/142 (52%)
Query: 1 MIVPLEQKLDMLWSFIKA-HLNSKILVFLTSCKQVKYVFEAFKKLRPGIPLMCLYG-RMK 58
+I E+K + F+++ K++VF+ S K + + ++ GIP+ L+G R +
Sbjct: 448 IITTEEEKRSLFQEFLQSLSPKDKVIVFV-SRKLIADDLSSDLSIQ-GIPVQSLHGDREQ 505
Query: 59 QDRRMAIYAQFCEKRSVLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYN 118
DR A+ K +L TD+ASRGLD + V V + P ++ Y+HRVGRT R
Sbjct: 506 SDRERALDDFKTGKVKILIATDLASRGLDVSD-VTHVFNYNFPRNIEEYVHRVGRTGRAG 564
Query: 119 SGGRSVLFLTPTEMKMLEKLRE 140
G SV +T + K+ +L E
Sbjct: 565 KMGESVTLMTQDDWKVAGELIE 586
>UNIPROTKB|A4QSS5 [details] [associations]
symbol:DBP2 "ATP-dependent RNA helicase DBP2"
species:242507 "Magnaporthe oryzae 70-15" [GO:0043581 "mycelium
development" evidence=IEP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0000184 EMBL:CM001233 GO:GO:0003723
GO:GO:0043581 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 OrthoDB:EOG47SWP6 RefSeq:XP_003712846.1
ProteinModelPortal:A4QSS5 EnsemblFungi:MGG_16901T0 GeneID:12985738
KEGG:mgr:MGG_16901 Uniprot:A4QSS5
Length = 548
Score = 159 (61.0 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 43/126 (34%), Positives = 69/126 (54%)
Query: 22 SKILVFLTSCKQVKYVFEAFKKLRPGIPLMCLYGRMKQDRRMAIYAQFCEKRS-VLFCTD 80
+KIL+F+ + K+V F + + G P + ++G +Q+ R + QF +S ++ TD
Sbjct: 375 NKILIFVGT-KRVADEITRFLR-QDGWPALSIHGDKQQNERDWVLDQFKTGKSPIMVATD 432
Query: 81 VASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYNSGGRSVLFLTPTEMK----MLE 136
VASRG+D + V+ D P + YIHR+GRT R + G ++ F T K +L
Sbjct: 433 VASRGIDVRN-ITHVLNYDYPNNSEDYIHRIGRTGRAGAKGTAITFFTTENSKQARDLLG 491
Query: 137 KLREAK 142
L+EAK
Sbjct: 492 VLQEAK 497
>CGD|CAL0000864 [details] [associations]
symbol:DRS1 species:5476 "Candida albicans" [GO:0035690
"cellular response to drug" evidence=IMP] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0030687 "preribosome, large subunit precursor"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 CGD:CAL0000864 GO:GO:0005524
GO:GO:0005730 GO:GO:0042254 GO:GO:0003723 GO:GO:0035690
EMBL:AACQ01000032 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K13181 RefSeq:XP_719395.1 ProteinModelPortal:Q5ACK7
STRING:Q5ACK7 GeneID:3639045 KEGG:cal:CaO19.7635 Uniprot:Q5ACK7
Length = 613
Score = 157 (60.3 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 39/118 (33%), Positives = 66/118 (55%)
Query: 11 MLWSFIKAHLNSKILVFLTSCKQVKYVFEAFKKLRPGIPLMCLYGRMKQDRRMAIYAQFC 70
+L+ +K ++S+++VF+ K+ + L G+ + L+G + Q++R+ F
Sbjct: 364 LLYQLLKG-VSSRVVVFVAR-KETAHRLRIVLGLL-GLKVSELHGALTQEQRLQNVKNFK 420
Query: 71 EKR-SVLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYNSGGRSVLFL 127
VL CTD+A+RGLD K ++ V+ D P+ Y+HRVGRTAR G S+ F+
Sbjct: 421 SLEVPVLICTDLAARGLDIPK-IELVINYDMPKTFEIYLHRVGRTARAGRDGTSITFV 477
Score = 46 (21.3 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 9/32 (28%), Positives = 20/32 (62%)
Query: 238 AEKEDKLMISREKLLPDNFTEENVDRDILETK 269
AE+ +KL+ S+E ++ + EE +++L +
Sbjct: 506 AEETNKLLESKESVIDEVLEEEKEAKELLRAE 537
>UNIPROTKB|Q5ACK7 [details] [associations]
symbol:DRS1 "ATP-dependent RNA helicase DRS1"
species:237561 "Candida albicans SC5314" [GO:0035690 "cellular
response to drug" evidence=IMP] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 CGD:CAL0000864
GO:GO:0005524 GO:GO:0005730 GO:GO:0042254 GO:GO:0003723
GO:GO:0035690 EMBL:AACQ01000032 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K13181 RefSeq:XP_719395.1
ProteinModelPortal:Q5ACK7 STRING:Q5ACK7 GeneID:3639045
KEGG:cal:CaO19.7635 Uniprot:Q5ACK7
Length = 613
Score = 157 (60.3 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 39/118 (33%), Positives = 66/118 (55%)
Query: 11 MLWSFIKAHLNSKILVFLTSCKQVKYVFEAFKKLRPGIPLMCLYGRMKQDRRMAIYAQFC 70
+L+ +K ++S+++VF+ K+ + L G+ + L+G + Q++R+ F
Sbjct: 364 LLYQLLKG-VSSRVVVFVAR-KETAHRLRIVLGLL-GLKVSELHGALTQEQRLQNVKNFK 420
Query: 71 EKR-SVLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYNSGGRSVLFL 127
VL CTD+A+RGLD K ++ V+ D P+ Y+HRVGRTAR G S+ F+
Sbjct: 421 SLEVPVLICTDLAARGLDIPK-IELVINYDMPKTFEIYLHRVGRTARAGRDGTSITFV 477
Score = 46 (21.3 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 9/32 (28%), Positives = 20/32 (62%)
Query: 238 AEKEDKLMISREKLLPDNFTEENVDRDILETK 269
AE+ +KL+ S+E ++ + EE +++L +
Sbjct: 506 AEETNKLLESKESVIDEVLEEEKEAKELLRAE 537
>TAIR|locus:2148027 [details] [associations]
symbol:UAP56b "homolog of human UAP56 b" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0005618
"cell wall" evidence=IDA] [GO:0005829 "cytosol" evidence=RCA]
[GO:0009506 "plasmodesma" evidence=IDA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0009506 GO:GO:0005524 EMBL:CP002688
GO:GO:0005618 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
UniGene:At.49007 UniGene:At.73904 GeneID:830990 KEGG:ath:AT5G11200
OMA:LECVINY IPI:IPI00938969 RefSeq:NP_001154706.1
ProteinModelPortal:F4JWF6 SMR:F4JWF6 PRIDE:F4JWF6
EnsemblPlants:AT5G11200.2 Uniprot:F4JWF6
Length = 486
Score = 158 (60.7 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 35/122 (28%), Positives = 69/122 (56%)
Query: 22 SKILVFLTSCKQVKYVFEAFKKL-RPGIPLMCLYGRMKQDRRMAIYAQFCE-KRSVLFCT 79
+++++F+ K V E K L P +C++ M Q+ R+ Y F E + +L T
Sbjct: 348 NQVVIFV---KSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKSFKEGHKRILVAT 404
Query: 80 DVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYNSGGRSVLFL-TPTEMKMLEKL 138
D+ RG+D + V+ V+ D P+ +Y+HRVGR R+ + G ++ F+ + ++ ++L ++
Sbjct: 405 DLVGRGIDIER-VNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVASASDSEVLNQV 463
Query: 139 RE 140
+E
Sbjct: 464 QE 465
>UNIPROTKB|Q2KEF1 [details] [associations]
symbol:MGCH7_ch7g1085 "Putative uncharacterized protein"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:CM000230
GO:GO:0008026 ProteinModelPortal:Q2KEF1 Uniprot:Q2KEF1
Length = 568
Score = 159 (61.0 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 39/111 (35%), Positives = 59/111 (53%)
Query: 23 KILVFLTSCKQVKYVFEAFKKLRPGIP-LMCLYGRMKQDRRMAIYAQFCEKRS-VLFCTD 80
K +VF + V + + L P +P ++ L+ RM Q +R + + + + VL TD
Sbjct: 340 KAIVFAPTAALVDFYAAVLEGL-PNMPRILTLHSRMTQSKRTRVTEDYRKSNATVLVATD 398
Query: 81 VASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYNSGGRSVLFLTPTE 131
V +RG+DF + V QV P D SYIHR+GRTAR + GR ++ E
Sbjct: 399 VVARGMDFPSVTN-VFQVGLPMDKESYIHRLGRTARAGAEGRGTFIVSAAE 448
>UNIPROTKB|Q8ECL2 [details] [associations]
symbol:SO_3125 "ATP-dependent RNA helicase DEAD box family"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
ProtClustDB:CLSK907013 RefSeq:NP_718686.1 ProteinModelPortal:Q8ECL2
GeneID:1170814 KEGG:son:SO_3125 PATRIC:23525896 OMA:AHLIKQH
Uniprot:Q8ECL2
Length = 427
Score = 157 (60.3 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 43/142 (30%), Positives = 70/142 (49%)
Query: 6 EQKLDMLWSFIKAHLNSKILVFLTSCKQVKYVFEAFKKLRPGIPLMCLYGRMKQDRRMAI 65
EQK +L IK H S+ L+F+++ ++ + K GI +G Q R +
Sbjct: 238 EQKTALLAHLIKQHQWSQALIFVSAKNTCNHLAQKLSKR--GISAEVFHGDKAQGARTRV 295
Query: 66 YAQFCEKR-SVLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYNSGGRSV 124
F SVL TD+A+RG+D +K + V+ D P A Y+HR+GR+ R G +V
Sbjct: 296 LDGFKNGEISVLIATDIAARGIDIDK-LPVVINFDLPRSPADYMHRIGRSGRAGEAGLAV 354
Query: 125 LFLTPTEMK---MLEKLREAKI 143
++ E ++EK + K+
Sbjct: 355 TLISHEEYHHFGVIEKKNKIKL 376
>TIGR_CMR|SO_3125 [details] [associations]
symbol:SO_3125 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
ProtClustDB:CLSK907013 RefSeq:NP_718686.1 ProteinModelPortal:Q8ECL2
GeneID:1170814 KEGG:son:SO_3125 PATRIC:23525896 OMA:AHLIKQH
Uniprot:Q8ECL2
Length = 427
Score = 157 (60.3 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 43/142 (30%), Positives = 70/142 (49%)
Query: 6 EQKLDMLWSFIKAHLNSKILVFLTSCKQVKYVFEAFKKLRPGIPLMCLYGRMKQDRRMAI 65
EQK +L IK H S+ L+F+++ ++ + K GI +G Q R +
Sbjct: 238 EQKTALLAHLIKQHQWSQALIFVSAKNTCNHLAQKLSKR--GISAEVFHGDKAQGARTRV 295
Query: 66 YAQFCEKR-SVLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYNSGGRSV 124
F SVL TD+A+RG+D +K + V+ D P A Y+HR+GR+ R G +V
Sbjct: 296 LDGFKNGEISVLIATDIAARGIDIDK-LPVVINFDLPRSPADYMHRIGRSGRAGEAGLAV 354
Query: 125 LFLTPTEMK---MLEKLREAKI 143
++ E ++EK + K+
Sbjct: 355 TLISHEEYHHFGVIEKKNKIKL 376
>POMBASE|SPAC22F3.08c [details] [associations]
symbol:rok1 "ATP-dependent RNA helicase Rok1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=IC]
[GO:0005730 "nucleolus" evidence=ISO] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006364 "rRNA processing" evidence=ISO]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 PomBase:SPAC22F3.08c GO:GO:0005829 GO:GO:0005524
EMBL:CU329670 GO:GO:0005730 GenomeReviews:CU329670_GR GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0004004 eggNOG:COG0513 HOGENOM:HOG000242486 KO:K14779
PIR:T38183 RefSeq:NP_593033.1 ProteinModelPortal:Q09775
STRING:Q09775 EnsemblFungi:SPAC22F3.08c.1 GeneID:2541786
KEGG:spo:SPAC22F3.08c OMA:ERESINT OrthoDB:EOG425926
NextBio:20802875 Uniprot:Q09775
Length = 481
Score = 157 (60.3 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 39/125 (31%), Positives = 69/125 (55%)
Query: 8 KLDMLWSFIK-AHLNSKILVFLTSCKQVKYVFEA--FKKLRPGIPLMCLYGRMKQDRRMA 64
K+ +L I L ++++F+ ++ K ++ F ++ G+ ++G + Q +R
Sbjct: 274 KIVILRQMISNGELKPRVVIFVQDIERAKALYTELLFDEIHVGV----IHGELPQAKREE 329
Query: 65 IYAQFCEKRS-VLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYNSGGRS 123
A+F + VL TD+ +RG+DF+ V V+ D P+ V SYIHR+GRT R + G++
Sbjct: 330 ALAKFRKGEIWVLIATDLLARGIDFH-GVKMVINFDFPQSVHSYIHRIGRTGRAGNTGQA 388
Query: 124 VLFLT 128
V F T
Sbjct: 389 VTFFT 393
Score = 42 (19.8 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 9/31 (29%), Positives = 16/31 (51%)
Query: 317 PPLAMLADTKNANVSLDQDQKTEYYKKIREE 347
PP T+ + + +K EY KK+++E
Sbjct: 436 PPKRKRITTRASYDRQKEQRKKEYIKKVKKE 466
>UNIPROTKB|Q48AV0 [details] [associations]
symbol:CPS_0042 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0016070
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 RefSeq:YP_266818.1 ProteinModelPortal:Q48AV0
GeneID:3521124 KEGG:cps:CPS_0042 PATRIC:21463513 OMA:AITESAY
BioCyc:CPSY167879:GI48-153-MONOMER Uniprot:Q48AV0
Length = 420
Score = 156 (60.0 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 46/140 (32%), Positives = 72/140 (51%)
Query: 3 VPLEQKLDMLWSFIKAHLNSK-ILVFLTSCKQVKYVFEAFKKLRPGIPLMCLYGRMKQDR 61
V ++K + L SF+ N K +LVF T KQ A + + G+ + ++G Q
Sbjct: 228 VDADRKRE-LTSFLIGSRNWKQVLVF-TRTKQCADDL-AKEMTKDGVKSLAIHGDKSQGA 284
Query: 62 RMAIYAQFCE-KRSVLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYNSG 120
R +F E K L TDVA+RG+D K + V+ + P + Y+HR+GRTAR +
Sbjct: 285 REKALHEFKEGKVRALIATDVAARGIDI-KGLSHVINYELPYNAEDYVHRIGRTARAGNS 343
Query: 121 GRSVLFLTPTEMKMLEKLRE 140
G +V ++P E +L + E
Sbjct: 344 GLAVSLVSPGEEWLLTAIEE 363
>TIGR_CMR|CPS_0042 [details] [associations]
symbol:CPS_0042 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0016070
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 RefSeq:YP_266818.1 ProteinModelPortal:Q48AV0
GeneID:3521124 KEGG:cps:CPS_0042 PATRIC:21463513 OMA:AITESAY
BioCyc:CPSY167879:GI48-153-MONOMER Uniprot:Q48AV0
Length = 420
Score = 156 (60.0 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 46/140 (32%), Positives = 72/140 (51%)
Query: 3 VPLEQKLDMLWSFIKAHLNSK-ILVFLTSCKQVKYVFEAFKKLRPGIPLMCLYGRMKQDR 61
V ++K + L SF+ N K +LVF T KQ A + + G+ + ++G Q
Sbjct: 228 VDADRKRE-LTSFLIGSRNWKQVLVF-TRTKQCADDL-AKEMTKDGVKSLAIHGDKSQGA 284
Query: 62 RMAIYAQFCE-KRSVLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYNSG 120
R +F E K L TDVA+RG+D K + V+ + P + Y+HR+GRTAR +
Sbjct: 285 REKALHEFKEGKVRALIATDVAARGIDI-KGLSHVINYELPYNAEDYVHRIGRTARAGNS 343
Query: 121 GRSVLFLTPTEMKMLEKLRE 140
G +V ++P E +L + E
Sbjct: 344 GLAVSLVSPGEEWLLTAIEE 363
>FB|FBgn0037549 [details] [associations]
symbol:CG7878 species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR004087
InterPro:IPR004088 InterPro:IPR011545 Pfam:PF00013 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50084 PROSITE:PS51194
SMART:SM00322 SMART:SM00490 EMBL:AE014297 GO:GO:0005524
GO:GO:0006200 GO:GO:0003723 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00660000095174
HSSP:P10081 OMA:VLDITHV EMBL:AY051831 RefSeq:NP_649767.1
UniGene:Dm.1098 SMR:Q7K4L8 IntAct:Q7K4L8 EnsemblMetazoa:FBtr0113205
GeneID:40959 KEGG:dme:Dmel_CG7878 UCSC:CG7878-RA
FlyBase:FBgn0037549 InParanoid:Q7K4L8 OrthoDB:EOG47D7XG
GenomeRNAi:40959 NextBio:20818674 Uniprot:Q7K4L8
Length = 703
Score = 159 (61.0 bits), Expect = 2.8e-08, P = 2.8e-08
Identities = 46/137 (33%), Positives = 69/137 (50%)
Query: 8 KLDMLWSFIKAHLNS--KILVFLTSCKQVKYVFEAFKKLR-PGIPLMCLYGRMKQ-DRRM 63
K + + SF+K +++S KI++F C + + +L G C++G Q DR
Sbjct: 515 KFNTITSFVK-NMSSTDKIIIF---CGRKVRADDLSSELTLDGFMTQCIHGNRDQMDREQ 570
Query: 64 AIYAQFCEKRSVLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYNSGGRS 123
AI +L TDVASRGLD + V+ D P ++ Y+HRVGRT R G S
Sbjct: 571 AIADIKSGVVRILVATDVASRGLDIED-ITHVINYDFPHNIEEYVHRVGRTGRAGRQGTS 629
Query: 124 VLFLTPTEMKMLEKLRE 140
+ F T + M ++L E
Sbjct: 630 ISFFTREDWAMAKELIE 646
>TIGR_CMR|CPS_1726 [details] [associations]
symbol:CPS_1726 "RNA helicase DeaD" species:167879
"Colwellia psychrerythraea 34H" [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0009409 "response to cold" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:CP000083
GenomeReviews:CP000083_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268810 KO:K05592 InterPro:IPR005580
Pfam:PF03880 RefSeq:YP_268464.1 ProteinModelPortal:Q484Q1
STRING:Q484Q1 GeneID:3523325 KEGG:cps:CPS_1726 PATRIC:21466621
OMA:WIVKGVE ProtClustDB:CLSK741103
BioCyc:CPSY167879:GI48-1803-MONOMER Uniprot:Q484Q1
Length = 611
Score = 158 (60.7 bits), Expect = 2.9e-08, P = 2.9e-08
Identities = 37/93 (39%), Positives = 51/93 (54%)
Query: 42 KKL-RPGIPLMCLYGRMKQDRRMAIYAQFCE-KRSVLFCTDVASRGLDFNKAVDWVVQVD 99
+KL R G P + L G + Q +R Q K S+L TDV +RGLD + + V+ D
Sbjct: 272 EKLERAGYPALALNGDLNQAQRERCIDQMKSGKSSILVATDVVARGLDIPR-ISLVINYD 330
Query: 100 CPEDVASYIHRVGRTARYNSGGRSVLFLTPTEM 132
P D +Y+HR+GRT R G S+ F+ P EM
Sbjct: 331 LPGDNEAYVHRIGRTGRAGREGMSIAFVRPREM 363
>POMBASE|SPBC543.06c [details] [associations]
symbol:dbp8 "ATP-dependent RNA helicase Dbp8
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=ISM]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=ISO;IDA] [GO:0006364 "rRNA processing" evidence=ISO]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 PomBase:SPBC543.06c GO:GO:0005524 GO:GO:0005730
EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K14778 HOGENOM:HOG000268802 OMA:EVRTVEQ OrthoDB:EOG4PP1RW
RefSeq:NP_596794.1 ProteinModelPortal:Q9HGM5 STRING:Q9HGM5
EnsemblFungi:SPBC543.06c.1 GeneID:2541069 KEGG:spo:SPBC543.06c
NextBio:20802183 Uniprot:Q9HGM5
Length = 453
Score = 156 (60.0 bits), Expect = 3.0e-08, P = 3.0e-08
Identities = 37/126 (29%), Positives = 62/126 (49%)
Query: 16 IKAHLNSKILVFLTSCKQVKYVFEAFKKLRPGIPLMCLYGRMKQDRRMAIYAQF-CEKRS 74
I + ++F+ + + ++ + L + + L+ M Q R+ +F E
Sbjct: 253 IPENAKKSAIIFVNRTRTAELIYSILRLLE--LRVTELHSEMVQRERINSLGRFRAEAAK 310
Query: 75 VLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYNSGGRSVLFLTPTEMKM 134
+L TDVASRGLD +V V+ D P D YIHRVGRTAR G S+ +T ++ +
Sbjct: 311 ILVATDVASRGLDI-PSVQLVINFDLPRDPDDYIHRVGRTARAGRSGESISIVTERDVDL 369
Query: 135 LEKLRE 140
+ + +
Sbjct: 370 VHAIED 375
>UNIPROTKB|P21693 [details] [associations]
symbol:dbpA species:83333 "Escherichia coli K-12"
[GO:0003724 "RNA helicase activity" evidence=IDA] [GO:0016887
"ATPase activity" evidence=IDA] [GO:0033677 "DNA/RNA helicase
activity" evidence=IDA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0000027 "ribosomal large subunit assembly" evidence=IMP]
[GO:0034459 "ATP-dependent 3'-5' RNA helicase activity"
evidence=IDA] [GO:0019843 "rRNA binding" evidence=IDA] [GO:0043531
"ADP binding" evidence=IDA] [GO:0005524 "ATP binding"
evidence=IEA;IDA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005737 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0043531
GO:GO:0019843 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0000027 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
EMBL:X52647 PIR:B64884 RefSeq:NP_415859.1 RefSeq:YP_489613.1
ProteinModelPortal:P21693 SMR:P21693 IntAct:P21693 PRIDE:P21693
EnsemblBacteria:EBESCT00000004879 EnsemblBacteria:EBESCT00000014318
GeneID:12933991 GeneID:947153 KEGG:ecj:Y75_p1320 KEGG:eco:b1343
PATRIC:32117966 EchoBASE:EB0206 EcoGene:EG10210
HOGENOM:HOG000268809 KO:K05591 OMA:HIDPARF ProtClustDB:PRK11776
BioCyc:EcoCyc:EG10210-MONOMER BioCyc:ECOL316407:JW1337-MONOMER
BioCyc:MetaCyc:EG10210-MONOMER Genevestigator:P21693 GO:GO:0034459
GO:GO:0033677 InterPro:IPR005580 Pfam:PF03880 Uniprot:P21693
Length = 457
Score = 156 (60.0 bits), Expect = 3.0e-08, P = 3.0e-08
Identities = 40/125 (32%), Positives = 66/125 (52%)
Query: 8 KLDMLWSFIKAHLNSKILVFLTSCKQVKYVFEAFKKLRPGIPLMCLYGRMKQDRRMAIYA 67
K+ +L + H S +VF + K + V +A ++ G + L+G ++Q R
Sbjct: 228 KIPLLQRLLSLHQPSSCVVFCNTKKDCQAVCDALNEV--GQSALSLHGDLEQRDRDQTLV 285
Query: 68 QFCEKRS-VLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYNSGGRSVLF 126
+F + VL TDVA+RGLD K+++ VV + D ++HR+GRTAR + G ++ F
Sbjct: 286 RFANGSARVLVATDVAARGLDI-KSLELVVNFELAWDPEVHVHRIGRTARAGNSGLAISF 344
Query: 127 LTPTE 131
P E
Sbjct: 345 CAPEE 349
WARNING: HSPs involving 475 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.135 0.386 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 454 401 0.00098 117 3 11 22 0.39 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 725
No. of states in DFA: 610 (65 KB)
Total size of DFA: 239 KB (2130 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 38.67u 0.08s 38.75t Elapsed: 00:00:03
Total cpu time: 38.70u 0.08s 38.78t Elapsed: 00:00:03
Start: Tue May 21 01:41:01 2013 End: Tue May 21 01:41:04 2013
WARNINGS ISSUED: 2