Query         012878
Match_columns 454
No_of_seqs    184 out of 1793
Neff          10.9
Searched_HMMs 46136
Date          Fri Mar 29 07:15:16 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012878.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/012878hhsearch_cdd -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 KOG0156 Cytochrome P450 CYP2 s 100.0   8E-80 1.7E-84  580.4  44.3  429    1-448    55-488 (489)
  2 KOG0158 Cytochrome P450 CYP3/C 100.0 5.1E-77 1.1E-81  552.5  37.2  421    6-448    66-499 (499)
  3 PLN00110 flavonoid 3',5'-hydro 100.0 3.1E-75 6.6E-80  565.7  44.3  441    1-453    59-502 (504)
  4 PLN02971 tryptophan N-hydroxyl 100.0 2.3E-75 5.1E-80  571.6  43.5  439    1-451    87-537 (543)
  5 PLN02687 flavonoid 3'-monooxyg 100.0 1.6E-74 3.4E-79  564.1  44.4  446    1-454    62-515 (517)
  6 PLN03234 cytochrome P450 83B1; 100.0 2.2E-74 4.8E-79  562.5  43.7  436    1-447    57-498 (499)
  7 PLN02183 ferulate 5-hydroxylas 100.0 2.3E-73   5E-78  555.8  42.4  434    1-448    64-512 (516)
  8 PLN02394 trans-cinnamate 4-mon 100.0 7.6E-73 1.6E-77  552.2  43.7  434    1-448    59-502 (503)
  9 PLN00168 Cytochrome P450; Prov 100.0   1E-72 2.2E-77  551.6  44.6  438    1-449    66-518 (519)
 10 PLN03112 cytochrome P450 famil 100.0 1.1E-72 2.3E-77  552.2  44.7  444    1-454    60-514 (514)
 11 PLN02966 cytochrome P450 83A1  100.0 3.7E-72   8E-77  545.9  43.9  432    1-445    58-497 (502)
 12 PLN02738 carotene beta-ring hy 100.0   3E-72 6.6E-77  551.1  43.4  425    1-449   160-596 (633)
 13 PTZ00404 cytochrome P450; Prov 100.0 1.6E-72 3.4E-77  547.1  40.2  420    1-447    57-482 (482)
 14 PLN02655 ent-kaurene oxidase   100.0 5.8E-72 1.3E-76  539.5  43.1  429    1-449    28-465 (466)
 15 KOG0159 Cytochrome P450 CYP11/ 100.0 3.3E-71 7.1E-76  501.7  37.5  424    1-448    82-518 (519)
 16 PLN02290 cytokinin trans-hydro 100.0 3.1E-71 6.8E-76  542.1  39.4  425    1-449    89-516 (516)
 17 PLN03018 homomethionine N-hydr 100.0 7.1E-70 1.5E-74  528.9  45.6  432    6-450    76-526 (534)
 18 PF00067 p450:  Cytochrome P450 100.0 8.3E-71 1.8E-75  536.1  32.7  425    1-444    29-463 (463)
 19 PLN02936 epsilon-ring hydroxyl 100.0 7.8E-69 1.7E-73  519.9  41.5  424    1-448    45-482 (489)
 20 KOG0157 Cytochrome P450 CYP4/C 100.0 1.3E-69 2.8E-74  521.9  34.8  420    2-449    67-497 (497)
 21 PLN02500 cytochrome P450 90B1  100.0 7.8E-69 1.7E-73  521.4  38.5  406    1-446    71-488 (490)
 22 PLN02169 fatty acid (omega-1)- 100.0 2.3E-68 5.1E-73  516.5  38.8  420    4-448    65-500 (500)
 23 PLN03195 fatty acid omega-hydr 100.0 5.5E-68 1.2E-72  518.8  38.4  424    2-448    58-516 (516)
 24 PLN02774 brassinosteroid-6-oxi 100.0 4.1E-67   9E-72  505.3  37.1  399    1-446    59-462 (463)
 25 PLN03141 3-epi-6-deoxocathaste 100.0 8.9E-67 1.9E-71  501.9  39.0  403    1-449    40-451 (452)
 26 PLN02196 abscisic acid 8'-hydr 100.0 8.3E-67 1.8E-71  502.8  35.6  395    1-447    64-462 (463)
 27 PLN02426 cytochrome P450, fami 100.0 5.1E-66 1.1E-70  499.3  39.9  417    3-448    71-500 (502)
 28 PLN02302 ent-kaurenoic acid ox 100.0 2.7E-65 5.9E-70  498.8  40.5  407    1-449    75-489 (490)
 29 PLN02987 Cytochrome P450, fami 100.0 1.6E-64 3.6E-69  485.1  38.9  403    1-448    63-469 (472)
 30 KOG0684 Cytochrome P450 [Secon 100.0 3.9E-60 8.4E-65  419.0  31.4  414    2-448    61-485 (486)
 31 PLN02648 allene oxide synthase 100.0 5.7E-56 1.2E-60  422.8  27.9  379    2-422    51-463 (480)
 32 COG2124 CypX Cytochrome P450 [ 100.0 1.7E-54 3.6E-59  408.1  33.0  374    2-447    32-410 (411)
 33 PF08492 SRP72:  SRP72 RNA-bind  71.4     2.5 5.5E-05   27.3   1.3    9  363-371    44-52  (59)
 34 PF12554 MOZART1:  Mitotic-spin  60.3      28 0.00061   21.5   4.2   42  241-282     6-47  (48)
 35 PF05952 ComX:  Bacillus compet  45.9      10 0.00023   24.3   0.8   24  264-287     5-28  (57)
 36 KOG3506 40S ribosomal protein   43.1      11 0.00024   23.6   0.6   11  384-394    12-22  (56)
 37 PF12508 DUF3714:  Protein of u  40.7      21 0.00044   30.1   2.0   43  300-344    52-94  (200)
 38 PF14129 DUF4296:  Domain of un  36.2 1.6E+02  0.0034   20.9   6.2   48  239-286    31-78  (87)
 39 PF09201 SRX:  SRX;  InterPro:   34.4      36 0.00078   26.3   2.3   23  391-413    18-40  (148)
 40 PRK06789 flagellar motor switc  32.0      46   0.001   22.8   2.3   39  307-345    22-62  (74)
 41 PHA03162 hypothetical protein;  30.5      45 0.00098   25.5   2.2   25  387-411     2-26  (135)
 42 PF13893 RRM_5:  RNA recognitio  29.8      98  0.0021   19.3   3.6   30    3-32      6-39  (56)
 43 PHA01346 hypothetical protein   28.1      53  0.0011   19.3   1.7   18  269-286    27-45  (53)
 44 PF14550 Peptidase_U35_2:  Puta  28.0      42 0.00092   25.6   1.8   23  322-344    70-92  (122)
 45 PF11227 DUF3025:  Protein of u  27.5      34 0.00073   28.9   1.3   20  347-366   192-211 (212)
 46 PF07886 BA14K:  BA14K-like pro  26.9      62  0.0014   17.8   1.8   16  379-394    16-31  (31)
 47 KOG0114 Predicted RNA-binding   26.6 1.3E+02  0.0028   22.2   3.8   31    4-34     41-77  (124)
 48 PF14483 Cut8_M:  Cut8 dimerisa  26.3 1.1E+02  0.0023   17.8   2.8   18  263-280    17-35  (38)
 49 PF09926 DUF2158:  Uncharacteri  24.3      74  0.0016   20.2   2.1   18    5-22      3-20  (53)
 50 PF13993 YccJ:  YccJ-like prote  23.4   1E+02  0.0022   20.0   2.5   31  251-281     8-39  (69)
 51 COG1759 5-formaminoimidazole-4  22.5 1.4E+02   0.003   27.2   4.1   69  304-407   276-351 (361)
 52 PF07849 DUF1641:  Protein of u  22.2 1.1E+02  0.0023   18.3   2.4   19  262-280    13-31  (42)
 53 COG4471 Uncharacterized protei  20.7 2.4E+02  0.0052   20.0   4.1   32    3-34     23-54  (90)
 54 cd08780 Death_TRADD Death Doma  20.3 3.4E+02  0.0073   19.4   5.4   69   63-136    13-88  (90)

No 1  
>KOG0156 consensus Cytochrome P450 CYP2 subfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=8e-80  Score=580.40  Aligned_cols=429  Identities=42%  Similarity=0.750  Sum_probs=378.2

Q ss_pred             CccccCCeEEEEcCCeeEEEecCHHHHHHHHHhCCcccCCCCc-chhhhhhccCCeeeEeCCCChhHHHHHHHHHHhhcC
Q 012878            1 MADKYGPIFTMKLGVKQALMVSNWEIAKECFTTNDKAFASRPK-TMAMELLEYNFSVISFAPYGNYWRQSLKIATIELLS   79 (454)
Q Consensus         1 l~~~yG~v~~i~~~~~~~vvv~dp~~~~~il~~~~~~f~~~~~-~~~~~~~~~~~~~~~~~~~~~~w~~~R~~~~~~~f~   79 (454)
                      |+++|||||.+|+|..++|||+|+++++|+|++++..|++||. ......+.+++.+++++.+|+.||++||+.....++
T Consensus        55 ls~~yGpi~tl~lG~~~~Vviss~~~akE~l~~~d~~fa~Rp~~~~~~~~~~~~~~~i~~a~yG~~Wr~~Rr~~~~~L~~  134 (489)
T KOG0156|consen   55 LSKKYGPVFTLRLGSVPVVVISSYEAAKEVLVKQDLEFADRPDPTATLKYLSYGGKGIVFAPYGDYWREMRRFALTELRS  134 (489)
T ss_pred             HHHHhCCeEEEEecCceEEEECCHHHHHHHHHhCCccccCCCCchhhHHHhcCCCCceEeCCCcHHHHHHHHHHHHHhcC
Confidence            5789999999999999999999999999999999999999997 335577777888999999999999999999888899


Q ss_pred             hHHHHHhHHHHHHHHHHHHHHHHhccccCCCCCcceeecHHHHHHHHHHHHHHHHHhCCCCCCc-chhHHHHHHHHHHHH
Q 012878           80 SHRLEKLKHVREYEVKASIQRLYKNCVSSSSSRKVVLVDMIHWLEGTVLDVVLRIIAGKRHTSQ-SQEINDWQRQITKFT  158 (454)
Q Consensus        80 ~~~~~~~~~~~~~~~~~li~~l~~~~~~~~~g~~~~~vdl~~~~~~~~~~vi~~~~fG~~~~~~-~~~~~~~~~~~~~~~  158 (454)
                      ...+++....-.++++.+++.+.+.    ..+ +  +||+...+..++.++|++++||.++..+ ++...++...+.+..
T Consensus       135 ~~~~~~~~~~R~~E~~~l~~~l~~~----~~~-~--~vdl~~~l~~~~~nvI~~~~fG~rf~~~~~~~~~~~~~l~~~~~  207 (489)
T KOG0156|consen  135 FGRGKSFMEIREEEVDELVKKLSKS----KKG-E--PVDLSELLDLLVGNVICRMLFGRRFEEEDEEEFLELKELVEESL  207 (489)
T ss_pred             hhhhhhhHHHHHHHHHHHHHHHHhc----CCC-c--eeeHHHHHHHHHHHHHHHHHhCCccccCCchHHHHHHHHHHHHH
Confidence            9999998888899999999998862    123 4  9999999999999999999999999843 355566889999999


Q ss_pred             Hhhcchhhhhhcc-cccccc-ccchHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCchHHHHHHhccccccccCCCC
Q 012878          159 ALTGQFVVSDALP-FLRWLD-IGGYERLMSKTAKYFDIILQEWLDEHKMKRVSGEVKGDEDFIYVLLSLLDDNAEQLPDR  236 (454)
Q Consensus       159 ~~~~~~~~~~~~P-~l~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~  236 (454)
                      ...+.+.+.+++| ++.+++ ..+..+........+..+++++|+++++.. ..  +++.|++|.|+...++++.   . 
T Consensus       208 ~~~~~~~~~d~~p~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~i~eh~~~~-~~--~~~~D~vD~lL~~~~~~~~---~-  280 (489)
T KOG0156|consen  208 ELLGSFNLSDYFPFLLRWLDGISGLEKRLKKVSKRLDEFLERIIDEHREKI-GD--EEGRDFVDALLKLMKEEKA---E-  280 (489)
T ss_pred             HHhCCccHHHHhhHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHhhh-cc--CCCCcHHHHHHHhhccccc---C-
Confidence            9999988899999 677775 234566677777779999999999998765 22  2228999999998775422   1 


Q ss_pred             Cc-HHHHHHHHHHHHHccccchHHHHHHHHHHHHhChhHHHHHHHHHhHhhcCCCCCCcccccCcHHHHHHHHHHhhcCC
Q 012878          237 DA-DTVIKAICVTLIVAAADTTVVTLTWAIALLLNNRDVLKKAQDELDIQVGTKRQVNGSDMRNLVYLQAMIKETMRLYP  315 (454)
Q Consensus       237 ~~-~~~i~~~~~~~~~ag~~tta~~l~~~l~~L~~~pe~q~~l~~Ei~~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~~  315 (454)
                      .+ +++|...+.++++||+|||++++.|++.+|++||++|+|+++||++++|.++.++.+|+.+||||+|||+|++|++|
T Consensus       281 ~~t~~~i~~~~~dl~~AGtdTta~Tl~Wa~a~Ll~~Pev~~K~qeEId~vvG~~r~v~e~D~~~lpYL~Avi~E~~Rl~p  360 (489)
T KOG0156|consen  281 GLTDDHLKALILDLFLAGTDTTATTLEWAMAELLNNPEVQKKLQEEIDEVVGKGRLVSESDLPKLPYLKAVIKETLRLHP  360 (489)
T ss_pred             CCCHHHHHHHHHHHHhcccchHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCChhhhccCHHHHHHHHHHHhcCC
Confidence            17 99999999999999999999999999999999999999999999999998888999999999999999999999999


Q ss_pred             CCcCCCcccccccccccceEeCCCCeEEeehhhhhcCCCCCCCCCCCCCCCcCCCCCCcCccCCCcceecccCCCCCCCc
Q 012878          316 ALPLLLPHESIEECTVNGYHVPAGTQLFVNAWKIQRDPCVWEEPCQFQPERFLTTHKDIDVRGQNFELIPFGSGRRMCPA  395 (454)
Q Consensus       316 ~~~~~~~R~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~~~~~~~~~~~~~~~FG~G~r~C~G  395 (454)
                      ++|+.++|.+++|+.++||.|||||.|+++.|++||||++|+||++|+||||++++ +  ..+....++|||.|+|+|||
T Consensus       361 ~~Pl~~ph~~~~d~~i~Gy~IPkgT~v~vn~~ai~rDp~vw~dP~eF~PERFl~~~-d--~~~~~~~~iPFG~GRR~CpG  437 (489)
T KOG0156|consen  361 PLPLLLPRETTEDTKIGGYDIPKGTTVLVNLWAIHRDPKVWEDPEEFKPERFLDSN-D--GKGLDFKLIPFGSGRRICPG  437 (489)
T ss_pred             CccccccccccCCeeEcCEEcCCCCEEEEeehhhhcCCccCCCccccChhhhcCCc-c--ccCCceEecCCCCCcCCCCc
Confidence            99999999999999999999999999999999999999999999999999999985 1  22356889999999999999


Q ss_pred             hhHHHHHHHHHHHHHhhcceeeCCCCCCCCcccccCceeccCCCeEEEEeecC
Q 012878          396 VSYGLQVMQLMLASLVHGFDFTTPSGEPVDMAETMGLTSAKATPLEVLVSPRL  448 (454)
Q Consensus       396 ~~la~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~  448 (454)
                      ..||++++.++++.|+++|+|++..+ .+++... +.+...+.++.+...+|.
T Consensus       438 ~~La~~~l~l~la~llq~F~w~~~~~-~~d~~e~-~~~~~~~~pl~~~~~~r~  488 (489)
T KOG0156|consen  438 EGLARAELFLFLANLLQRFDWKLPGG-KVDMEEA-GLTLKKKKPLKAVPVPRL  488 (489)
T ss_pred             HHHHHHHHHHHHHHHHheeeeecCCC-CCCCccc-ccceecCCcceeeeecCC
Confidence            99999999999999999999999887 6677665 366667778888888774


No 2  
>KOG0158 consensus Cytochrome P450 CYP3/CYP5/CYP6/CYP9 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=5.1e-77  Score=552.53  Aligned_cols=421  Identities=24%  Similarity=0.350  Sum_probs=337.4

Q ss_pred             CCeEEEEcCCeeEEEecCHHHHHHHHHhCCcccCCC--CcchhhhhhccCCeeeEeCCCChhHHHHHHHHHHhhcChHHH
Q 012878            6 GPIFTMKLGVKQALMVSNWEIAKECFTTNDKAFASR--PKTMAMELLEYNFSVISFAPYGNYWRQSLKIATIELLSSHRL   83 (454)
Q Consensus         6 G~v~~i~~~~~~~vvv~dp~~~~~il~~~~~~f~~~--~~~~~~~~~~~~~~~~~~~~~~~~w~~~R~~~~~~~f~~~~~   83 (454)
                      ||+|.++.+.+|.++|+|||.+++|+++..+.|+++  +......-  ......+|..+|++||++|..++ |.|++..+
T Consensus        66 ~~~~G~y~~~~p~l~v~D~elik~I~ik~F~~F~~r~~~~~~d~~~--~l~~~~Lf~~~g~~WK~lR~~ls-P~Fts~km  142 (499)
T KOG0158|consen   66 RPVVGIYEGRQPALLVSDPELIKEILIKDFDNFYNRKRPIYGDPED--PLSALNLFFLRGERWKRLRTKLS-PTFTSGKL  142 (499)
T ss_pred             CCEEEEEecCCcceEecCHHHHHHHHHHhCccCcCCCCCCcCCCCC--cccccCchhccCchHHHHHHhhc-cccchhhH
Confidence            999999999999999999999999999999999984  33222210  11123457778999999999998 99999999


Q ss_pred             HHhHHHHHHHHHHHHHHHHhccccCCCCCcceeecHHHHHHHHHHHHHHHHHhCCCCCCcchhHHHHHHHHHHHHHh-hc
Q 012878           84 EKLKHVREYEVKASIQRLYKNCVSSSSSRKVVLVDMIHWLEGTVLDVVLRIIAGKRHTSQSQEINDWQRQITKFTAL-TG  162 (454)
Q Consensus        84 ~~~~~~~~~~~~~li~~l~~~~~~~~~g~~~~~vdl~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~-~~  162 (454)
                      +++.|.+++.++++++.+.++   ...+ +  .+++.+.+.++|.|||+++.||.+.++..+....+.......... ..
T Consensus       143 k~m~~t~~~~~~~l~~~l~~~---~~~~-~--~~~~~dl~~~yT~DVI~~~AfG~~~~s~~d~~~~F~~~~~~~~~~~~~  216 (499)
T KOG0158|consen  143 KKMFPTMEEVGDELVRHLRRK---SEGG-Q--EGEIKDLCARYTTDVIGSCAFGLDANSLRDPKAEFRRMGRRAFFLSRG  216 (499)
T ss_pred             HHHHHHHHHHHHHHHHHHHHh---hccc-C--CccHHHHHHHHHHHHHhHhhcccchhhhcCchHHHHHhhHHHHHHhhc
Confidence            999999999999999999987   4333 3  678888889999999999999999974323333454433333333 22


Q ss_pred             chh----hhhhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCchHHHHHHhccccccccCCCC-C
Q 012878          163 QFV----VSDALPFLRWLDIGGYERLMSKTAKYFDIILQEWLDEHKMKRVSGEVKGDEDFIYVLLSLLDDNAEQLPDR-D  237 (454)
Q Consensus       163 ~~~----~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~-~  237 (454)
                      .+.    ....+|.+....  ..........+.+.+.+...++.|.+..     ....|+++.|++.+.+...+.... .
T Consensus       217 ~~~l~~~~~~~~p~l~~~l--~~~~~~~~~~~~~~~~v~~~v~~R~~~~-----~~r~Dfi~lll~~~~~~~~~~~~~~~  289 (499)
T KOG0158|consen  217 LFPLKFMLIFLFPKLALPL--RVKLFPEDVTDFFRKLVNSRVEQREKEN-----IERNDFIDLLLDARASDFAKSKSHKA  289 (499)
T ss_pred             cchHhHhHHHHhHHHHHhh--hcccChHHHHHHHHHHHHHHHHHHHhcC-----CCCchHHHHHHHhhcccccccccccc
Confidence            211    122234332221  1112234455666667777777663322     568899999999886411111122 4


Q ss_pred             c-HHHHHHHHHHHHHccccchHHHHHHHHHHHHhChhHHHHHHHHHhHhhcCCCCCCcccccCcHHHHHHHHHHhhcCCC
Q 012878          238 A-DTVIKAICVTLIVAAADTTVVTLTWAIALLLNNRDVLKKAQDELDIQVGTKRQVNGSDMRNLVYLQAMIKETMRLYPA  316 (454)
Q Consensus       238 ~-~~~i~~~~~~~~~ag~~tta~~l~~~l~~L~~~pe~q~~l~~Ei~~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~~~  316 (454)
                      + .++|+++++.+++||.||||+++++++|+||+||++|+|||+||++++.+...+|++.+++|+||++||+||||+||+
T Consensus       290 lt~dei~aQafvFl~AGfeTts~tlsf~lYeLA~~PdvQ~kLreEI~~~~~~~~~ltyd~l~~L~YLd~Vi~ETLR~yP~  369 (499)
T KOG0158|consen  290 LTDDEIAAQAFVFLLAGFETTASTLSFALYELAKNPDVQDKLREEIDEVLEEKEGLTYDSLSKLKYLDMVIKETLRLYPP  369 (499)
T ss_pred             cCHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhcChHHHHHHHHHHHHHhcccCCCCHHHHhCCcHHHHHHHHHHhhCCC
Confidence            7 999999999999999999999999999999999999999999999998765559999999999999999999999999


Q ss_pred             CcCCCccccccccccc-ceEeCCCCeEEeehhhhhcCCCCCCCCCCCCCCCcCCCCCCcCccCCCcceecccCCCCCCCc
Q 012878          317 LPLLLPHESIEECTVN-GYHVPAGTQLFVNAWKIQRDPCVWEEPCQFQPERFLTTHKDIDVRGQNFELIPFGSGRRMCPA  395 (454)
Q Consensus       317 ~~~~~~R~~~~d~~~~-g~~ip~Gt~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~~~~~~~~~~~~~~~FG~G~r~C~G  395 (454)
                      ++.. .|.+++|++++ ++.||||+.|.++++++||||++||||++|+||||.+++.+   ..++..|+|||.|||.|+|
T Consensus       370 ~~~~-~R~C~k~~~i~~~~~i~kG~~V~Ip~~alH~Dp~~~p~Pe~F~PERF~~~~~~---~~~~~~ylPFG~GPR~CIG  445 (499)
T KOG0158|consen  370 APFL-NRECTKDYEIPGGFVIPKGTPVMIPTYALHHDPEYWPEPEKFKPERFEEENNK---SRHPGAYLPFGVGPRNCIG  445 (499)
T ss_pred             cccc-cceecCceecCCCeEeCCCCEEEeecccccCCcccCCCcccCCCccCCCCccc---ccCCccccCCCCCccccHH
Confidence            9995 89999999999 99999999999999999999999999999999999987633   2378999999999999999


Q ss_pred             hhHHHHHHHHHHHHHhhcceeeCCCCCCCCccccc---CceeccCCCeEEEEeecC
Q 012878          396 VSYGLQVMQLMLASLVHGFDFTTPSGEPVDMAETM---GLTSAKATPLEVLVSPRL  448 (454)
Q Consensus       396 ~~la~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~r~  448 (454)
                      .+||.+|+|+.|+.||++|+++..+.+ +.. ...   +.++.|++++++++.+|.
T Consensus       446 mRfa~mq~K~~L~~lL~~f~~~~~~~t-~~~-~~~~~~~~~l~pk~gi~Lkl~~r~  499 (499)
T KOG0158|consen  446 MRFALMEAKLALAHLLRNFSFEVCPTT-IIP-LEGDPKGFTLSPKGGIWLKLEPRD  499 (499)
T ss_pred             HHHHHHHHHHHHHHHHhhCEEecCCcc-cCc-ccCCccceeeecCCceEEEEEeCC
Confidence            999999999999999999999988732 222 333   566788999999999984


No 3  
>PLN00110 flavonoid 3',5'-hydroxylase (F3'5'H); Provisional
Probab=100.00  E-value=3.1e-75  Score=565.66  Aligned_cols=441  Identities=35%  Similarity=0.653  Sum_probs=359.4

Q ss_pred             CccccCCeEEEEcCCeeEEEecCHHHHHHHHHhCCcccCCCCcchhhhhhccCCeeeEeCCCChhHHHHHHHHHHhhcCh
Q 012878            1 MADKYGPIFTMKLGVKQALMVSNWEIAKECFTTNDKAFASRPKTMAMELLEYNFSVISFAPYGNYWRQSLKIATIELLSS   80 (454)
Q Consensus         1 l~~~yG~v~~i~~~~~~~vvv~dp~~~~~il~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~R~~~~~~~f~~   80 (454)
                      |+++|||||++++|++++|+|+||+++++++.++...|++++..........+..+++++.+|+.|+++|+++++++|++
T Consensus        59 ~~~~yG~i~~~~~g~~~~vvv~dpe~~~~vl~~~~~~f~~r~~~~~~~~~~~~~~~~l~~~~g~~w~~~Rr~~~~~~f~~  138 (504)
T PLN00110         59 MAKRYGPVMFLKMGTNSMVVASTPEAARAFLKTLDINFSNRPPNAGATHLAYGAQDMVFADYGPRWKLLRKLSNLHMLGG  138 (504)
T ss_pred             HHHHhCCeEEEEcCCccEEEECCHHHHHHHHHhcchhhcCCCCccchhhhccCCCceeeCCCCHHHHHHHHHHHHHhCCH
Confidence            57899999999999999999999999999999887788888765433222223334567788999999999998568999


Q ss_pred             HHHHHhHHHHHHHHHHHHHHHHhccccCCCCCcceeecHHHHHHHHHHHHHHHHHhCCCCC-CcchhHHHHHHHHHHHHH
Q 012878           81 HRLEKLKHVREYEVKASIQRLYKNCVSSSSSRKVVLVDMIHWLEGTVLDVVLRIIAGKRHT-SQSQEINDWQRQITKFTA  159 (454)
Q Consensus        81 ~~~~~~~~~~~~~~~~li~~l~~~~~~~~~g~~~~~vdl~~~~~~~~~~vi~~~~fG~~~~-~~~~~~~~~~~~~~~~~~  159 (454)
                      +.++++.+.+.+++..+++.+.+.   ..+| +  ++|+.+++..+++|+++.++||.++. ..+....++...+.....
T Consensus       139 ~~l~~~~~~i~~~~~~~~~~l~~~---~~~g-~--~~~~~~~~~~~~~~vi~~~~fg~~~~~~~~~~~~~~~~~~~~~~~  212 (504)
T PLN00110        139 KALEDWSQVRTVELGHMLRAMLEL---SQRG-E--PVVVPEMLTFSMANMIGQVILSRRVFETKGSESNEFKDMVVELMT  212 (504)
T ss_pred             HHHHHhhHHHHHHHHHHHHHHHHh---ccCC-C--cEeHHHHHHHHHHHHHHHHHhCCcccccCchhHHHHHHHHHHHHH
Confidence            999999999999999999999775   3345 6  89999999999999999999999862 222233456666666655


Q ss_pred             hhcchhhhhhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCchHHHHHHhccccccccCCCCCc-
Q 012878          160 LTGQFVVSDALPFLRWLDIGGYERLMSKTAKYFDIILQEWLDEHKMKRVSGEVKGDEDFIYVLLSLLDDNAEQLPDRDA-  238 (454)
Q Consensus       160 ~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~-  238 (454)
                      ......+...+|++.|++.....+...+..+.+.+++.+.++++++.....  ....|+++.|++..++..    +..+ 
T Consensus       213 ~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--~~~~d~l~~ll~~~~~~~----~~~l~  286 (504)
T PLN00110        213 TAGYFNIGDFIPSIAWMDIQGIERGMKHLHKKFDKLLTRMIEEHTASAHER--KGNPDFLDVVMANQENST----GEKLT  286 (504)
T ss_pred             HhccccHHHHcchHhhhCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcccc--ccCCChhhHHhhcccccC----CCCCC
Confidence            444333445667766653333345566677778888888888776543111  234689999997643321    3457 


Q ss_pred             HHHHHHHHHHHHHccccchHHHHHHHHHHHHhChhHHHHHHHHHhHhhcCCCCCCcccccCcHHHHHHHHHHhhcCCCCc
Q 012878          239 DTVIKAICVTLIVAAADTTVVTLTWAIALLLNNRDVLKKAQDELDIQVGTKRQVNGSDMRNLVYLQAMIKETMRLYPALP  318 (454)
Q Consensus       239 ~~~i~~~~~~~~~ag~~tta~~l~~~l~~L~~~pe~q~~l~~Ei~~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~~~~~  318 (454)
                      ++++.++++++++||+|||+++++|++++|++||++|+|+++|+++++++.+.++.+++++||||+|||+||||++|+++
T Consensus       287 ~~~i~~~~~~~~~Ag~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~~~~~~~~~~lpyl~avi~EtlRl~p~~~  366 (504)
T PLN00110        287 LTNIKALLLNLFTAGTDTSSSVIEWSLAEMLKNPSILKRAHEEMDQVIGRNRRLVESDLPKLPYLQAICKESFRKHPSTP  366 (504)
T ss_pred             HHHHHHHHHhhhcccccchHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCCHHHhhcChHHHHHHHHHhcCCCCcc
Confidence            89999999999999999999999999999999999999999999999987677899999999999999999999999999


Q ss_pred             CCCcccccccccccceEeCCCCeEEeehhhhhcCCCCCCCCCCCCCCCcCCCCCCc-CccCCCcceecccCCCCCCCchh
Q 012878          319 LLLPHESIEECTVNGYHVPAGTQLFVNAWKIQRDPCVWEEPCQFQPERFLTTHKDI-DVRGQNFELIPFGSGRRMCPAVS  397 (454)
Q Consensus       319 ~~~~R~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~~~~-~~~~~~~~~~~FG~G~r~C~G~~  397 (454)
                      +.++|.+.+|++++||.|||||.|.++.+++||||++||||++|+||||+++.... +.......++|||.|+|.|+|++
T Consensus       367 ~~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~h~d~~~~~dP~~F~PeRfl~~~~~~~~~~~~~~~~~pFG~G~R~C~G~~  446 (504)
T PLN00110        367 LNLPRVSTQACEVNGYYIPKNTRLSVNIWAIGRDPDVWENPEEFRPERFLSEKNAKIDPRGNDFELIPFGAGRRICAGTR  446 (504)
T ss_pred             cccccccCCCeeeCCEEECCCCEEEEeHHHhcCChhhcCCcccCCcccccCCCCcccccCCCeeeEeCCCCCCCCCCcHH
Confidence            87689999999999999999999999999999999999999999999999653211 11112357999999999999999


Q ss_pred             HHHHHHHHHHHHHhhcceeeCCCCCCCCcccccCceeccCCCeEEEEeecCCCCCC
Q 012878          398 YGLQVMQLMLASLVHGFDFTTPSGEPVDMAETMGLTSAKATPLEVLVSPRLSASSY  453 (454)
Q Consensus       398 la~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~  453 (454)
                      ||++|++++++.|+++|++++.++.+..+....+++++|+.++++++++|.+-|.|
T Consensus       447 ~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~  502 (504)
T PLN00110        447 MGIVLVEYILGTLVHSFDWKLPDGVELNMDEAFGLALQKAVPLSAMVTPRLHQSAY  502 (504)
T ss_pred             HHHHHHHHHHHHHHHhceeecCCCCccCcccccccccccCCCceEeeccCCCchhc
Confidence            99999999999999999999887655444334566777888999999999876665


No 4  
>PLN02971 tryptophan N-hydroxylase
Probab=100.00  E-value=2.3e-75  Score=571.62  Aligned_cols=439  Identities=28%  Similarity=0.492  Sum_probs=348.9

Q ss_pred             CccccC-CeEEEEcCCeeEEEecCHHHHHHHHHhCCcccCCCCcchhhhhhccCCeeeEeCCCChhHHHHHHHHHHhhcC
Q 012878            1 MADKYG-PIFTMKLGVKQALMVSNWEIAKECFTTNDKAFASRPKTMAMELLEYNFSVISFAPYGNYWRQSLKIATIELLS   79 (454)
Q Consensus         1 l~~~yG-~v~~i~~~~~~~vvv~dp~~~~~il~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~R~~~~~~~f~   79 (454)
                      |+++|| +||++++|++++|+|+||++++++|.+++..|++|+.......++.+..++++..+|+.|+++||++..+.++
T Consensus        87 ~~~~yg~~i~~~~~G~~~~vvv~dpe~ikevl~~~~~~f~~rp~~~~~~~l~~~~~~~l~~~~G~~Wk~~Rk~l~~~l~~  166 (543)
T PLN02971         87 LMKELNTEIACVRLGNTHVIPVTCPKIAREIFKQQDALFASRPLTYAQKILSNGYKTCVITPFGEQFKKMRKVIMTEIVC  166 (543)
T ss_pred             HHHHhCCceEEEEcCCcceEEECCHHHHHHHHHhcchhhcCCCcccchhhccCCCCceEecCCcHHHHHHHHHHHHHhcc
Confidence            568999 8999999999999999999999999998888999886554444544434467888899999999999756777


Q ss_pred             hHHHHHhHHHHHHHHHHHHHHHHhccccCCCCCcceeecHHHHHHHHHHHHHHHHHhCCCCCCc-----chhHHHHHHHH
Q 012878           80 SHRLEKLKHVREYEVKASIQRLYKNCVSSSSSRKVVLVDMIHWLEGTVLDVVLRIIAGKRHTSQ-----SQEINDWQRQI  154 (454)
Q Consensus        80 ~~~~~~~~~~~~~~~~~li~~l~~~~~~~~~g~~~~~vdl~~~~~~~~~~vi~~~~fG~~~~~~-----~~~~~~~~~~~  154 (454)
                      +...+.+.+.++++++.+++.+.+.   ..++ +  ++|+.+.+++++++++++++||.++.+.     ++...+....+
T Consensus       167 ~~~~~~~~~~~~~~~~~l~~~l~~~---~~~~-~--~vd~~~~~~~~t~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~  240 (543)
T PLN02971        167 PARHRWLHDNRAEETDHLTAWLYNM---VKNS-E--PVDLRFVTRHYCGNAIKRLMFGTRTFSEKTEPDGGPTLEDIEHM  240 (543)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHh---ccCC-C--ceehHHHHHHHHHHHHHHHHhCCcccccccccccchhHHHHHHH
Confidence            7777788899999999998888764   3344 5  8999999999999999999999987311     11111223333


Q ss_pred             HHHHHhhc---chhhhhhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCchHHHHHHhccccccc
Q 012878          155 TKFTALTG---QFVVSDALPFLRWLDIGGYERLMSKTAKYFDIILQEWLDEHKMKRVSGEVKGDEDFIYVLLSLLDDNAE  231 (454)
Q Consensus       155 ~~~~~~~~---~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~  231 (454)
                      ..++....   ...+.+++|++.+++..+..+......+.+.+++.++|+++++...++......|+++.|++..++.  
T Consensus       241 ~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~l~~ll~~~~~~--  318 (543)
T PLN02971        241 DAMFEGLGFTFAFCISDYLPMLTGLDLNGHEKIMRESSAIMDKYHDPIIDERIKMWREGKRTQIEDFLDIFISIKDEA--  318 (543)
T ss_pred             HHHHHHHHhccCCcHHHhCCchhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCcCHHHHHHhhhccc--
Confidence            33332221   1123455676665532233445555677788888888888765431221123469999999864432  


Q ss_pred             cCCCC-Cc-HHHHHHHHHHHHHccccchHHHHHHHHHHHHhChhHHHHHHHHHhHhhcCCCCCCcccccCcHHHHHHHHH
Q 012878          232 QLPDR-DA-DTVIKAICVTLIVAAADTTVVTLTWAIALLLNNRDVLKKAQDELDIQVGTKRQVNGSDMRNLVYLQAMIKE  309 (454)
Q Consensus       232 ~~~~~-~~-~~~i~~~~~~~~~ag~~tta~~l~~~l~~L~~~pe~q~~l~~Ei~~~~~~~~~~~~~~~~~lp~l~a~i~E  309 (454)
                         +. .+ ++++.+++.++++||+|||+++++|++++|++||++|+|+++||++++++++.++++++++|||++|||+|
T Consensus       319 ---~~~~ls~~~i~~~~~~l~~AG~dTTa~tl~~~l~~La~~Pevq~kl~~EI~~v~g~~~~~t~~d~~~LpYl~avi~E  395 (543)
T PLN02971        319 ---GQPLLTADEIKPTIKELVMAAPDNPSNAVEWAMAEMINKPEILHKAMEEIDRVVGKERFVQESDIPKLNYVKAIIRE  395 (543)
T ss_pred             ---CCCCCCHHHHHHhHHHHheeccchHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCCHHHhccCHHHHHHHHH
Confidence               22 37 99999999999999999999999999999999999999999999999998788999999999999999999


Q ss_pred             HhhcCCCCcCCCcccccccccccceEeCCCCeEEeehhhhhcCCCCCCCCCCCCCCCcCCCCCCcCccCCCcceecccCC
Q 012878          310 TMRLYPALPLLLPHESIEECTVNGYHVPAGTQLFVNAWKIQRDPCVWEEPCQFQPERFLTTHKDIDVRGQNFELIPFGSG  389 (454)
Q Consensus       310 ~lRl~~~~~~~~~R~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~~~~~~~~~~~~~~~FG~G  389 (454)
                      +||++|++++.++|.+.+|++++||.|||||.|.+++|++||||++|+||++|+||||+++..+......+..|+|||.|
T Consensus       396 ~lRl~p~~~~~~~r~~~~d~~~~G~~IpkGt~v~~~~~~~~~d~~~~~dP~~F~PeRfl~~~~~~~~~~~~~~~~pFG~G  475 (543)
T PLN02971        396 AFRLHPVAAFNLPHVALSDTTVAGYHIPKGSQVLLSRYGLGRNPKVWSDPLSFKPERHLNECSEVTLTENDLRFISFSTG  475 (543)
T ss_pred             HHhcCCCcccCcceecCCCeeECCEEECCCCEEEECcHHhcCChhhCCCccccCcccCCCCCccccccCCCCccCCCCCC
Confidence            99999999997789999999999999999999999999999999999999999999999754221111245689999999


Q ss_pred             CCCCCchhHHHHHHHHHHHHHhhcceeeCCCC-CCCCcccccCceeccCCCeEEEEeecCCCC
Q 012878          390 RRMCPAVSYGLQVMQLMLASLVHGFDFTTPSG-EPVDMAETMGLTSAKATPLEVLVSPRLSAS  451 (454)
Q Consensus       390 ~r~C~G~~la~~~~~~~l~~ll~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~  451 (454)
                      +|.|+|++||++|++++++.|+++|++++.++ ..+++...++ ++..++++.+.+.+|..++
T Consensus       476 ~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~  537 (543)
T PLN02971        476 KRGCAAPALGTAITTMMLARLLQGFKWKLAGSETRVELMESSH-DMFLSKPLVMVGELRLSED  537 (543)
T ss_pred             CCCCCCHHHHHHHHHHHHHHHHHhCEEEeCCCCCCcchhhhcC-cccccccceeeeeecCCcc
Confidence            99999999999999999999999999998765 3566655555 4434558999999995544


No 5  
>PLN02687 flavonoid 3'-monooxygenase
Probab=100.00  E-value=1.6e-74  Score=564.11  Aligned_cols=446  Identities=38%  Similarity=0.712  Sum_probs=359.3

Q ss_pred             CccccCCeEEEEcCCeeEEEecCHHHHHHHHHhCCcccCCCCcchhhhhhccCCeeeEeCCCChhHHHHHHHHHHhhcCh
Q 012878            1 MADKYGPIFTMKLGVKQALMVSNWEIAKECFTTNDKAFASRPKTMAMELLEYNFSVISFAPYGNYWRQSLKIATIELLSS   80 (454)
Q Consensus         1 l~~~yG~v~~i~~~~~~~vvv~dp~~~~~il~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~R~~~~~~~f~~   80 (454)
                      |+++||+||++++|++++|+++||+++++++.++...|.+++.......+...+.+++++.+|+.|+++|+++.+++|+.
T Consensus        62 ~~~~yG~i~~~~~g~~~~vvv~~p~~~~~il~~~~~~f~~r~~~~~~~~~~~~~~~~l~~~~g~~Wk~~Rr~l~~~~fs~  141 (517)
T PLN02687         62 LAKTYGPLFRLRFGFVDVVVAASASVAAQFLRTHDANFSNRPPNSGAEHMAYNYQDLVFAPYGPRWRALRKICAVHLFSA  141 (517)
T ss_pred             HHHHhCCeeEEecCCceEEEeCCHHHHHHHHHhcchhhhcCCCccchhhhccCCceeEeCCCCHHHHHHHHHHHHHhCCH
Confidence            57899999999999999999999999999999887889888765444444433446678888999999999997578999


Q ss_pred             HHHHHhHHHHHHHHHHHHHHHHhccccCCCCCcceeecHHHHHHHHHHHHHHHHHhCCCCCC--cchhHHHHHHHHHHHH
Q 012878           81 HRLEKLKHVREYEVKASIQRLYKNCVSSSSSRKVVLVDMIHWLEGTVLDVVLRIIAGKRHTS--QSQEINDWQRQITKFT  158 (454)
Q Consensus        81 ~~~~~~~~~~~~~~~~li~~l~~~~~~~~~g~~~~~vdl~~~~~~~~~~vi~~~~fG~~~~~--~~~~~~~~~~~~~~~~  158 (454)
                      ++++++.+.+.++++++++.|.+.   . ++ +  ++|+.+++..+++|+++.++||.++..  .++....+...+..+.
T Consensus       142 ~~l~~~~~~i~~~~~~l~~~l~~~---~-~~-~--~vd~~~~~~~~t~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~  214 (517)
T PLN02687        142 KALDDFRHVREEEVALLVRELARQ---H-GT-A--PVNLGQLVNVCTTNALGRAMVGRRVFAGDGDEKAREFKEMVVELM  214 (517)
T ss_pred             HHHHHhHHHHHHHHHHHHHHHHHh---c-CC-C--ceeHHHHHHHHHHHHHHHHHhCccccccCCcchHHHHHHHHHHHH
Confidence            999999999999999999999764   2 23 5  899999999999999999999998752  2233345666666665


Q ss_pred             HhhcchhhhhhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCchHHHHHHhccccccccCCCCCc
Q 012878          159 ALTGQFVVSDALPFLRWLDIGGYERLMSKTAKYFDIILQEWLDEHKMKRVSGEVKGDEDFIYVLLSLLDDNAEQLPDRDA  238 (454)
Q Consensus       159 ~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~  238 (454)
                      ...........+|++.|++.....+...+..+.+.+++.++++++++.. +.+.....|+++.|++...+......+..+
T Consensus       215 ~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~-~~~~~~~~d~l~~ll~~~~~~~~~~~~~~l  293 (517)
T PLN02687        215 QLAGVFNVGDFVPALRWLDLQGVVGKMKRLHRRFDAMMNGIIEEHKAAG-QTGSEEHKDLLSTLLALKREQQADGEGGRI  293 (517)
T ss_pred             HHhccCcHHHHhhhHHHhCcccHHHHHHHHHHHHHHHHHHHHHHHHHhc-cccCcccccHHHHHHHhhccccccccccCC
Confidence            5443333335567666553333344566677888889999998887654 211134569999999865432100013357


Q ss_pred             -HHHHHHHHHHHHHccccchHHHHHHHHHHHHhChhHHHHHHHHHhHhhcCCCCCCcccccCcHHHHHHHHHHhhcCCCC
Q 012878          239 -DTVIKAICVTLIVAAADTTVVTLTWAIALLLNNRDVLKKAQDELDIQVGTKRQVNGSDMRNLVYLQAMIKETMRLYPAL  317 (454)
Q Consensus       239 -~~~i~~~~~~~~~ag~~tta~~l~~~l~~L~~~pe~q~~l~~Ei~~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~~~~  317 (454)
                       ++++.+++.++++||+|||+++++|++++|++||++|+|+++||++++++++.++.+++++||||+|||+|+||++|++
T Consensus       294 ~~~~i~~~~~~~~~AG~eTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~~~~~~~l~~lpyl~a~i~EtlRl~p~~  373 (517)
T PLN02687        294 TDTEIKALLLNLFTAGTDTTSSTVEWAIAELIRHPDILKKAQEELDAVVGRDRLVSESDLPQLTYLQAVIKETFRLHPST  373 (517)
T ss_pred             CHHHHHHHHHHHhccccCchHHHHHHHHHHHHhCHHHHHHHHHHHHHHcCCCCCCCHHHhhhCHHHHHHHHHHHccCCCc
Confidence             8999999999999999999999999999999999999999999999998777889999999999999999999999999


Q ss_pred             cCCCcccccccccccceEeCCCCeEEeehhhhhcCCCCCCCCCCCCCCCcCCCCCCc--CccCCCcceecccCCCCCCCc
Q 012878          318 PLLLPHESIEECTVNGYHVPAGTQLFVNAWKIQRDPCVWEEPCQFQPERFLTTHKDI--DVRGQNFELIPFGSGRRMCPA  395 (454)
Q Consensus       318 ~~~~~R~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~~~~--~~~~~~~~~~~FG~G~r~C~G  395 (454)
                      +..++|.+.+|++++|+.||+||.|.++.+++||||++|+||++|+||||+++....  ........++|||.|+|.|+|
T Consensus       374 ~~~~~R~~~~d~~~~g~~ip~Gt~v~~~~~~~h~d~~~~~dp~~F~PeRfl~~~~~~~~~~~~~~~~~~pFG~G~r~C~G  453 (517)
T PLN02687        374 PLSLPRMAAEECEINGYHIPKGATLLVNVWAIARDPEQWPDPLEFRPDRFLPGGEHAGVDVKGSDFELIPFGAGRRICAG  453 (517)
T ss_pred             cccccccCCCCeeECCEEECCCCEEEEecHHhcCCcccCCCcccCCchhcCCCCCccccccCCCceeeCCCCCCCCCCCC
Confidence            986689999999999999999999999999999999999999999999999754211  111245689999999999999


Q ss_pred             hhHHHHHHHHHHHHHhhcceeeCCCCC---CCCcccccCceeccCCCeEEEEeecCCCCCCC
Q 012878          396 VSYGLQVMQLMLASLVHGFDFTTPSGE---PVDMAETMGLTSAKATPLEVLVSPRLSASSYG  454 (454)
Q Consensus       396 ~~la~~~~~~~l~~ll~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~  454 (454)
                      ++||++|++++++.|+++|++++.++.   ++++....+++..+..++++++++|+=-+-||
T Consensus       454 ~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~  515 (517)
T PLN02687        454 LSWGLRMVTLLTATLVHAFDWELADGQTPDKLNMEEAYGLTLQRAVPLMVHPRPRLLPSAYG  515 (517)
T ss_pred             hHHHHHHHHHHHHHHHHhcceecCCCCCcccCCcccccceeeecCCCeEEeeccCCChhhcc
Confidence            999999999999999999999988663   23333334455556678999999996336665


No 6  
>PLN03234 cytochrome P450 83B1; Provisional
Probab=100.00  E-value=2.2e-74  Score=562.45  Aligned_cols=436  Identities=35%  Similarity=0.621  Sum_probs=351.5

Q ss_pred             CccccCCeEEEEcCCeeEEEecCHHHHHHHHHhCCcccCCCCcchhhhhhccCCeeeEeCCCChhHHHHHHHHHHhhcCh
Q 012878            1 MADKYGPIFTMKLGVKQALMVSNWEIAKECFTTNDKAFASRPKTMAMELLEYNFSVISFAPYGNYWRQSLKIATIELLSS   80 (454)
Q Consensus         1 l~~~yG~v~~i~~~~~~~vvv~dp~~~~~il~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~R~~~~~~~f~~   80 (454)
                      |+++||++|++++|+.++|+++||+++++|+.++...|.+++.......+...+..+.++..++.|+++|+.+..++|++
T Consensus        57 ~~~~yG~~~~~~lg~~~~vvv~dpe~~~~il~~~~~~f~~r~~~~~~~~~~~~~~~~~~~~~~~~w~~~Rr~l~~~~f~~  136 (499)
T PLN03234         57 LSKLYGPIFTMKIGGRRLAVISSAELAKELLKTQDLNFTARPLLKGQQTMSYQGRELGFGQYTAYYREMRKMCMVNLFSP  136 (499)
T ss_pred             HHHHcCCeEEEEecCcCEEEECCHHHHHHHHHhCCccccCCCCchhhhhhccCCCccccCCCcHHHHHHHHHHHHHhcCH
Confidence            56899999999999999999999999999999888889888764433333322334446667899999999864489999


Q ss_pred             HHHHHhHHHHHHHHHHHHHHHHhccccCCCCCcceeecHHHHHHHHHHHHHHHHHhCCCCCCcchhHHHHHHHHHHHHHh
Q 012878           81 HRLEKLKHVREYEVKASIQRLYKNCVSSSSSRKVVLVDMIHWLEGTVLDVVLRIIAGKRHTSQSQEINDWQRQITKFTAL  160 (454)
Q Consensus        81 ~~~~~~~~~~~~~~~~li~~l~~~~~~~~~g~~~~~vdl~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~  160 (454)
                      ++++++.+.+.+.++++++.|.+.   ...+ +  ++|+.+++..+++|+++.++||.+++..++....+.+.+.+....
T Consensus       137 ~~l~~~~~~i~~~~~~ll~~l~~~---~~~~-~--~vd~~~~~~~~t~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~  210 (499)
T PLN03234        137 NRVASFRPVREEECQRMMDKIYKA---ADQS-G--TVDLSELLLSFTNCVVCRQAFGKRYNEYGTEMKRFIDILYETQAL  210 (499)
T ss_pred             HHHHHhHHHHHHHHHHHHHHHHHh---ccCC-C--eEEHHHHHHHHHHHHHHHHHhCCcccccchhHHHHHHHHHHHHHH
Confidence            999999999999999999999765   3334 5  899999999999999999999999863333344555555554443


Q ss_pred             hcchhhhhhcccccccc-ccchHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCchHHHHHHhccccccccCCCCCc-
Q 012878          161 TGQFVVSDALPFLRWLD-IGGYERLMSKTAKYFDIILQEWLDEHKMKRVSGEVKGDEDFIYVLLSLLDDNAEQLPDRDA-  238 (454)
Q Consensus       161 ~~~~~~~~~~P~l~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~-  238 (454)
                      .........+|++.++. +.+..++..++.+.+.+++.++|+++++....+  ....|+++.|++...+.+.   +..+ 
T Consensus       211 ~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--~~~~d~l~~l~~~~~~~~~---~~~~~  285 (499)
T PLN03234        211 LGTLFFSDLFPYFGFLDNLTGLSARLKKAFKELDTYLQELLDETLDPNRPK--QETESFIDLLMQIYKDQPF---SIKFT  285 (499)
T ss_pred             cCCCcHHHHhhHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccC--CCcccHHHHHHHHhhccCc---CCCCC
Confidence            33333344556554331 122345677888899999999998876543111  2356899999876543211   2357 


Q ss_pred             HHHHHHHHHHHHHccccchHHHHHHHHHHHHhChhHHHHHHHHHhHhhcCCCCCCcccccCcHHHHHHHHHHhhcCCCCc
Q 012878          239 DTVIKAICVTLIVAAADTTVVTLTWAIALLLNNRDVLKKAQDELDIQVGTKRQVNGSDMRNLVYLQAMIKETMRLYPALP  318 (454)
Q Consensus       239 ~~~i~~~~~~~~~ag~~tta~~l~~~l~~L~~~pe~q~~l~~Ei~~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~~~~~  318 (454)
                      ++++.+++.++++||+|||+++++|++++|++||++|+|+++|+++++++.+.++++++++||||+|||+|+||++|+++
T Consensus       286 ~~~i~~~~~~ll~AG~dTTa~tl~~~l~~L~~~P~v~~kl~~Ei~~~~~~~~~~~~~~l~~l~yl~avi~E~lRl~p~~~  365 (499)
T PLN03234        286 HENVKAMILDIVVPGTDTAAAVVVWAMTYLIKYPEAMKKAQDEVRNVIGDKGYVSEEDIPNLPYLKAVIKESLRLEPVIP  365 (499)
T ss_pred             HHHHHHHHHHHHhcchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCCHHHHhcChHHHHHHHHHhccCCCcc
Confidence            99999999999999999999999999999999999999999999999987777899999999999999999999999999


Q ss_pred             CCCcccccccccccceEeCCCCeEEeehhhhhcCCCCC-CCCCCCCCCCcCCCCCCcCccCCCcceecccCCCCCCCchh
Q 012878          319 LLLPHESIEECTVNGYHVPAGTQLFVNAWKIQRDPCVW-EEPCQFQPERFLTTHKDIDVRGQNFELIPFGSGRRMCPAVS  397 (454)
Q Consensus       319 ~~~~R~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~~-~dp~~F~P~R~l~~~~~~~~~~~~~~~~~FG~G~r~C~G~~  397 (454)
                      +.++|.+.+|++++||.|||||.|.++.+.+||||++| |||++|+||||+++.+..........++|||.|+|.|+|++
T Consensus       366 ~~~~R~~~~d~~~~g~~IP~Gt~v~~~~~~~~rd~~~~~~~P~~F~PeR~l~~~~~~~~~~~~~~~~pFG~G~R~C~G~~  445 (499)
T PLN03234        366 ILLHRETIADAKIGGYDIPAKTIIQVNAWAVSRDTAAWGDNPNEFIPERFMKEHKGVDFKGQDFELLPFGSGRRMCPAMH  445 (499)
T ss_pred             ccCCcccCCCeeECCEEECCCCEEEEehHhhhCCcccccCChhhcCchhhcCCCCCcCcCCCcceEeCCCCCCCCCCChH
Confidence            97689999999999999999999999999999999999 89999999999976432222335678999999999999999


Q ss_pred             HHHHHHHHHHHHHhhcceeeCCCC-C--CCCcccccCceeccCCCeEEEEeec
Q 012878          398 YGLQVMQLMLASLVHGFDFTTPSG-E--PVDMAETMGLTSAKATPLEVLVSPR  447 (454)
Q Consensus       398 la~~~~~~~l~~ll~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~r  447 (454)
                      +|++|++++++.|+++|++++.++ .  .+.+....+++..++..+.+.+++|
T Consensus       446 ~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  498 (499)
T PLN03234        446 LGIAMVEIPFANLLYKFDWSLPKGIKPEDIKMDVMTGLAMHKKEHLVLAPTKH  498 (499)
T ss_pred             HHHHHHHHHHHHHHHheeeeCCCCCCCCCCCcccccccccccCCCeEEEeecC
Confidence            999999999999999999999875 2  2344444566666777777777766


No 7  
>PLN02183 ferulate 5-hydroxylase
Probab=100.00  E-value=2.3e-73  Score=555.76  Aligned_cols=434  Identities=34%  Similarity=0.633  Sum_probs=345.0

Q ss_pred             CccccCCeEEEEcCCeeEEEecCHHHHHHHHHhCCcccCCCCcchhhhhhccCCeeeEeCCCChhHHHHHHHHHHhhcCh
Q 012878            1 MADKYGPIFTMKLGVKQALMVSNWEIAKECFTTNDKAFASRPKTMAMELLEYNFSVISFAPYGNYWRQSLKIATIELLSS   80 (454)
Q Consensus         1 l~~~yG~v~~i~~~~~~~vvv~dp~~~~~il~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~R~~~~~~~f~~   80 (454)
                      |+++|||+|++++|+.++|+|+||+++++|+.++...|+.++..........++.+.+++.+|+.|+++|+++..++|+.
T Consensus        64 ~~~~yG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~f~~r~~~~~~~~~~~~~~~~l~~~~g~~w~~~Rr~~~~~~f~~  143 (516)
T PLN02183         64 LAKQYGGLFHMRMGYLHMVAVSSPEVARQVLQVQDSVFSNRPANIAISYLTYDRADMAFAHYGPFWRQMRKLCVMKLFSR  143 (516)
T ss_pred             HHHHhCCeeEEEeCCcceEEeCCHHHHHHHHHhhhhhhcCCCcccchhccccCCCceEeCCCChHHHHHHHHHHHHhcCH
Confidence            57899999999999999999999999999999887888887764333323222334567788999999999954489999


Q ss_pred             HHHHHhHHHHHHHHHHHHHHHHhccccCCCCCcceeecHHHHHHHHHHHHHHHHHhCCCCCCcchhHHHHHHHHHHHHHh
Q 012878           81 HRLEKLKHVREYEVKASIQRLYKNCVSSSSSRKVVLVDMIHWLEGTVLDVVLRIIAGKRHTSQSQEINDWQRQITKFTAL  160 (454)
Q Consensus        81 ~~~~~~~~~~~~~~~~li~~l~~~~~~~~~g~~~~~vdl~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~  160 (454)
                      +.++.+.+.+ ++++.+++.|...     .| +  ++|+.+++..+++|++++++||.+.+.   ...++.+.+..+...
T Consensus       144 ~~l~~~~~~~-~~~~~~~~~l~~~-----~~-~--~v~~~~~~~~~~~~vi~~~~fG~~~~~---~~~~~~~~~~~~~~~  211 (516)
T PLN02183        144 KRAESWASVR-DEVDSMVRSVSSN-----IG-K--PVNIGELIFTLTRNITYRAAFGSSSNE---GQDEFIKILQEFSKL  211 (516)
T ss_pred             HHHHHHHHHH-HHHHHHHHHHHhc-----CC-C--cEeHHHHHHHHHHHHHHhHhhcCcccc---hHHHHHHHHHHHHHH
Confidence            9999988864 6789999998653     24 5  899999999999999999999998752   223455555555544


Q ss_pred             hcchhhhhhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhhhhcC-----CCCCCchHHHHHHhccccccc----
Q 012878          161 TGQFVVSDALPFLRWLDIGGYERLMSKTAKYFDIILQEWLDEHKMKRVSG-----EVKGDEDFIYVLLSLLDDNAE----  231 (454)
Q Consensus       161 ~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-----~~~~~~d~l~~ll~~~~~~~~----  231 (454)
                      .........+|++.++......++..+..+.+.+++.++++++.++....     ......|+++.|++...+...    
T Consensus       212 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~  291 (516)
T PLN02183        212 FGAFNVADFIPWLGWIDPQGLNKRLVKARKSLDGFIDDIIDDHIQKRKNQNADNDSEEAETDMVDDLLAFYSEEAKVNES  291 (516)
T ss_pred             hCCccHHHhcchhHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccccccHHHHHHHhhhcccccccc
Confidence            44334455667766553222345666677788888888887776543111     011345899999986533210    


Q ss_pred             --cCCCCCc-HHHHHHHHHHHHHccccchHHHHHHHHHHHHhChhHHHHHHHHHhHhhcCCCCCCcccccCcHHHHHHHH
Q 012878          232 --QLPDRDA-DTVIKAICVTLIVAAADTTVVTLTWAIALLLNNRDVLKKAQDELDIQVGTKRQVNGSDMRNLVYLQAMIK  308 (454)
Q Consensus       232 --~~~~~~~-~~~i~~~~~~~~~ag~~tta~~l~~~l~~L~~~pe~q~~l~~Ei~~~~~~~~~~~~~~~~~lp~l~a~i~  308 (454)
                        ...+..+ ++++.+++.++++||+|||+++++|++++|++||++|+|+++|++++++.++.++.+++++||||+|||+
T Consensus       292 ~~~~~~~~l~~~~i~~~~~~~~~AG~dTTa~tl~~~l~~La~~Pevq~kl~~Ei~~v~~~~~~~~~~~l~~L~yl~avi~  371 (516)
T PLN02183        292 DDLQNSIKLTRDNIKAIIMDVMFGGTETVASAIEWAMAELMKSPEDLKRVQQELADVVGLNRRVEESDLEKLTYLKCTLK  371 (516)
T ss_pred             ccccccCCCCHHHHHHHHHHHHHcchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHcCCCCCCCHHHhccChHHHHHHH
Confidence              0012347 8999999999999999999999999999999999999999999999998666789999999999999999


Q ss_pred             HHhhcCCCCcCCCcccccccccccceEeCCCCeEEeehhhhhcCCCCCCCCCCCCCCCcCCCCCCcCccCCCcceecccC
Q 012878          309 ETMRLYPALPLLLPHESIEECTVNGYHVPAGTQLFVNAWKIQRDPCVWEEPCQFQPERFLTTHKDIDVRGQNFELIPFGS  388 (454)
Q Consensus       309 E~lRl~~~~~~~~~R~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~~~~~~~~~~~~~~~FG~  388 (454)
                      ||||++|++|+. .|.+.+|++++||.|||||.|.++.+++||||++|+||++|+||||++++.. ........|+|||.
T Consensus       372 EtlRl~p~~p~~-~r~~~~d~~l~g~~IPkGt~V~~~~~~~hrd~~~~~dP~~F~PeRfl~~~~~-~~~~~~~~~lpFG~  449 (516)
T PLN02183        372 ETLRLHPPIPLL-LHETAEDAEVAGYFIPKRSRVMINAWAIGRDKNSWEDPDTFKPSRFLKPGVP-DFKGSHFEFIPFGS  449 (516)
T ss_pred             HHhccCCCccce-eeeccCceeECCEEECCCCEEEEehhhhcCCccccCCccccCchhhCCCCCc-cccCCcceecCCCC
Confidence            999999999998 6999999999999999999999999999999999999999999999975421 11124568999999


Q ss_pred             CCCCCCchhHHHHHHHHHHHHHhhcceeeCCCCCC---CCcccccCceeccCCCeEEEEeecC
Q 012878          389 GRRMCPAVSYGLQVMQLMLASLVHGFDFTTPSGEP---VDMAETMGLTSAKATPLEVLVSPRL  448 (454)
Q Consensus       389 G~r~C~G~~la~~~~~~~l~~ll~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~r~  448 (454)
                      |+|.|+|++||++|+++++|.|+++|++++.++..   .+....++.+.+++.++.+.+++|.
T Consensus       450 G~R~CiG~~lA~~e~~l~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~  512 (516)
T PLN02183        450 GRRSCPGMQLGLYALDLAVAHLLHCFTWELPDGMKPSELDMNDVFGLTAPRATRLVAVPTYRL  512 (516)
T ss_pred             CCCCCCChHHHHHHHHHHHHHHHheeEEEcCCCCCCCCCChhhccccccccCCCcEEEeecCC
Confidence            99999999999999999999999999999877632   3333334555556778999999994


No 8  
>PLN02394 trans-cinnamate 4-monooxygenase
Probab=100.00  E-value=7.6e-73  Score=552.22  Aligned_cols=434  Identities=29%  Similarity=0.540  Sum_probs=331.9

Q ss_pred             CccccCCeEEEEcCCeeEEEecCHHHHHHHHHhCCcccCCCCcchhhhhhccCCeeeEeCCCChhHHHHHHHHHHhhcCh
Q 012878            1 MADKYGPIFTMKLGVKQALMVSNWEIAKECFTTNDKAFASRPKTMAMELLEYNFSVISFAPYGNYWRQSLKIATIELLSS   80 (454)
Q Consensus         1 l~~~yG~v~~i~~~~~~~vvv~dp~~~~~il~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~R~~~~~~~f~~   80 (454)
                      |+++|||||++++|++++|+|+||+++++|+.+++..|.+++.......+...+.+.+++.+|+.|+++||.+..++|++
T Consensus        59 ~~~~yG~v~~i~~g~~~~v~v~dpe~i~~il~~~~~~~~~r~~~~~~~~~~g~~~~~l~~~~g~~w~~~Rk~~~~~~f~~  138 (503)
T PLN02394         59 MAKKYGDVFLLRMGQRNLVVVSSPELAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGDHWRKMRRIMTVPFFTN  138 (503)
T ss_pred             HHHHhCCeEEEEcCCeeEEEeCCHHHHHHHHHhCCccccCCCCcchHhHhccCCCceeecCCCHHHHHHHHHHHHHhcCh
Confidence            68999999999999999999999999999999887778777654443433333445667788999999999986588999


Q ss_pred             HHHHHhHHHHHHHHHHHHHHHHhccccCC-CCCcceeecHHHHHHHHHHHHHHHHHhCCCCCCc-chhHHHHHHHHHHHH
Q 012878           81 HRLEKLKHVREYEVKASIQRLYKNCVSSS-SSRKVVLVDMIHWLEGTVLDVVLRIIAGKRHTSQ-SQEINDWQRQITKFT  158 (454)
Q Consensus        81 ~~~~~~~~~~~~~~~~li~~l~~~~~~~~-~g~~~~~vdl~~~~~~~~~~vi~~~~fG~~~~~~-~~~~~~~~~~~~~~~  158 (454)
                      +.++.+.+.++++++.+++.|...   .. .+ +  .+|+...++.+++|++++++||.+++.. +.....+........
T Consensus       139 ~~l~~~~~~i~~~v~~lv~~l~~~---~~~~~-~--~v~~~~~~~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~  212 (503)
T PLN02394        139 KVVQQYRYGWEEEADLVVEDVRAN---PEAAT-E--GVVIRRRLQLMMYNIMYRMMFDRRFESEDDPLFLKLKALNGERS  212 (503)
T ss_pred             HHHHHhhHHHHHHHHHHHHHHHHh---hhccC-C--cEecHHHHHHHHHHHHHHHHhCCCcccccchhHHHHHHHHHHHH
Confidence            999999999999999999999765   22 23 4  6899999999999999999999998632 222222222222222


Q ss_pred             Hhhcc--hhhhhhccccccccccchHHHHHHHHHH-HHHHHHHHHHHHHhhhhcC--CCCCCchHHHHHHhccccccccC
Q 012878          159 ALTGQ--FVVSDALPFLRWLDIGGYERLMSKTAKY-FDIILQEWLDEHKMKRVSG--EVKGDEDFIYVLLSLLDDNAEQL  233 (454)
Q Consensus       159 ~~~~~--~~~~~~~P~l~~~~~~~~~~~~~~~~~~-~~~~~~~~i~~~~~~~~~~--~~~~~~d~l~~ll~~~~~~~~~~  233 (454)
                      .....  ..+...+|++.+.. ....+........ ...+....++++++.....  ..+...|+++.|++...+.    
T Consensus       213 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~----  287 (503)
T PLN02394        213 RLAQSFEYNYGDFIPILRPFL-RGYLKICQDVKERRLALFKDYFVDERKKLMSAKGMDKEGLKCAIDHILEAQKKG----  287 (503)
T ss_pred             HHhcccccchhhhchHHHHHh-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCcchhhhHHHHHHhccccC----
Confidence            22111  11122334333221 1111112222221 2223344455554432111  1123468999999865432    


Q ss_pred             CCCCc-HHHHHHHHHHHHHccccchHHHHHHHHHHHHhChhHHHHHHHHHhHhhcCCCCCCcccccCcHHHHHHHHHHhh
Q 012878          234 PDRDA-DTVIKAICVTLIVAAADTTVVTLTWAIALLLNNRDVLKKAQDELDIQVGTKRQVNGSDMRNLVYLQAMIKETMR  312 (454)
Q Consensus       234 ~~~~~-~~~i~~~~~~~~~ag~~tta~~l~~~l~~L~~~pe~q~~l~~Ei~~~~~~~~~~~~~~~~~lp~l~a~i~E~lR  312 (454)
                         .+ ++++..++.++++||+|||+++++|++++|++||++|+||++||+++++.++.++.+++++||||+|||+|+||
T Consensus       288 ---~l~~~~i~~~~~~~~~AG~dTTa~tl~~~l~~L~~~P~vq~kl~~Ei~~v~~~~~~~~~~~l~~lpyl~avi~EtlR  364 (503)
T PLN02394        288 ---EINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRDELDTVLGPGNQVTEPDTHKLPYLQAVVKETLR  364 (503)
T ss_pred             ---CCCHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHhCCCCCCCHhHHhhCHHHHHHHHHHHh
Confidence               36 88999999999999999999999999999999999999999999999987667899999999999999999999


Q ss_pred             cCCCCcCCCcccccccccccceEeCCCCeEEeehhhhhcCCCCCCCCCCCCCCCcCCCCCCcCccCCCcceecccCCCCC
Q 012878          313 LYPALPLLLPHESIEECTVNGYHVPAGTQLFVNAWKIQRDPCVWEEPCQFQPERFLTTHKDIDVRGQNFELIPFGSGRRM  392 (454)
Q Consensus       313 l~~~~~~~~~R~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~~~~~~~~~~~~~~~FG~G~r~  392 (454)
                      ++|++++.++|.+.+|++++||.||+||.|.++++++||||++||||++|+||||++++++.........++|||+|+|.
T Consensus       365 l~p~~~~~~~r~~~~d~~i~g~~IP~Gt~V~~~~~~~~rd~~~~~~P~~F~PeRwl~~~~~~~~~~~~~~~~pFg~G~R~  444 (503)
T PLN02394        365 LHMAIPLLVPHMNLEDAKLGGYDIPAESKILVNAWWLANNPELWKNPEEFRPERFLEEEAKVEANGNDFRFLPFGVGRRS  444 (503)
T ss_pred             cCCCcccccceecCCCcccCCEEeCCCCEEEEchHHHhCCcccCCCccccCccccCCCCCcccccCCCCceeCCCCCCCC
Confidence            99999998889999999999999999999999999999999999999999999999754321222245689999999999


Q ss_pred             CCchhHHHHHHHHHHHHHhhcceeeCCCCC-CCCcccccC-ceeccCCCeEEEEeecC
Q 012878          393 CPAVSYGLQVMQLMLASLVHGFDFTTPSGE-PVDMAETMG-LTSAKATPLEVLVSPRL  448 (454)
Q Consensus       393 C~G~~la~~~~~~~l~~ll~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~r~  448 (454)
                      |+|++||++|++++++.|+++|++++.++. ++++....+ ..+-.+.++++++.+|+
T Consensus       445 CiG~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~  502 (503)
T PLN02394        445 CPGIILALPILGIVLGRLVQNFELLPPPGQSKIDVSEKGGQFSLHIAKHSTVVFKPRS  502 (503)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHceeEeCCCCCcCccccccCceeeccCCCceEEeecCC
Confidence            999999999999999999999999988775 355544343 44434569999999996


No 9  
>PLN00168 Cytochrome P450; Provisional
Probab=100.00  E-value=1e-72  Score=551.60  Aligned_cols=438  Identities=23%  Similarity=0.436  Sum_probs=344.0

Q ss_pred             CccccCCeEEEEcCCeeEEEecCHHHHHHHHHhCCcccCCCCcchhhhhhccCCeeeEeCCCChhHHHHHHHHHHhhcCh
Q 012878            1 MADKYGPIFTMKLGVKQALMVSNWEIAKECFTTNDKAFASRPKTMAMELLEYNFSVISFAPYGNYWRQSLKIATIELLSS   80 (454)
Q Consensus         1 l~~~yG~v~~i~~~~~~~vvv~dp~~~~~il~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~R~~~~~~~f~~   80 (454)
                      |+++||++|++++|+.+.|+++||+++++++.++...|++++.......++.+...+.+..+|+.|+++||.+..++|+.
T Consensus        66 ~~~~yG~i~~~~~g~~~~vvv~dpe~~~~il~~~~~~f~~rp~~~~~~~~~~~~~~~~~~~~G~~Wk~~Rr~~~~~~fs~  145 (519)
T PLN00168         66 LIARYGPVVSLRVGSRLSVFVADRRLAHAALVERGAALADRPAVASSRLLGESDNTITRSSYGPVWRLLRRNLVAETLHP  145 (519)
T ss_pred             HHHHhCCeEEEEcCCccEEEECCHHHHHHHHHhcCCccccCCcccchhhhccCCCceeCCCCCHHHHHHHHHHHHhccCH
Confidence            57899999999999999999999999999999888889888765444444433223334468999999987544489999


Q ss_pred             HHHHHhHHHHHHHHHHHHHHHHhccccCCCCCcceeecHHHHHHHHHHHHHHHHHhCCCCCCcchhHHHHHHHHHHHHHh
Q 012878           81 HRLEKLKHVREYEVKASIQRLYKNCVSSSSSRKVVLVDMIHWLEGTVLDVVLRIIAGKRHTSQSQEINDWQRQITKFTAL  160 (454)
Q Consensus        81 ~~~~~~~~~~~~~~~~li~~l~~~~~~~~~g~~~~~vdl~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~  160 (454)
                      +.++++.+.+.+.++.+++.|.+.   ...+ +  .+|+.+.+..++.++++.++||.+++  +.....+......+...
T Consensus       146 ~~l~~~~~~~~~~~~~l~~~l~~~---~~~~-~--~v~~~~~~~~~~~~ii~~~~fG~~~~--~~~~~~~~~~~~~~~~~  217 (519)
T PLN00168        146 SRVRLFAPARAWVRRVLVDKLRRE---AEDA-A--APRVVETFQYAMFCLLVLMCFGERLD--EPAVRAIAAAQRDWLLY  217 (519)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHh---cCCC-C--CcCHHHHHHHHHHHHHHHHHcCCCcC--hhhHHHHHHHHHHHHHH
Confidence            999999999999999999999875   3334 4  78999999999999999999999985  22222333333332221


Q ss_pred             h-cchhhhhhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhhhhc--C-CC------CCCchHHHHHHhcccccc
Q 012878          161 T-GQFVVSDALPFLRWLDIGGYERLMSKTAKYFDIILQEWLDEHKMKRVS--G-EV------KGDEDFIYVLLSLLDDNA  230 (454)
Q Consensus       161 ~-~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~-~~------~~~~d~l~~ll~~~~~~~  230 (454)
                      . ....+...+|++.+.......++..+..+.+.+++.++++++++....  . +.      ....|+++.|++.....+
T Consensus       218 ~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~  297 (519)
T PLN00168        218 VSKKMSVFAFFPAVTKHLFRGRLQKALALRRRQKELFVPLIDARREYKNHLGQGGEPPKKETTFEHSYVDTLLDIRLPED  297 (519)
T ss_pred             hcCCCCHHHhCcchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCccccccccccccHHHHHHhhhcccc
Confidence            1 122234455654332111223445567788888888888887654311  0 00      014589999997653221


Q ss_pred             ccCCCCCc-HHHHHHHHHHHHHccccchHHHHHHHHHHHHhChhHHHHHHHHHhHhhcCC-CCCCcccccCcHHHHHHHH
Q 012878          231 EQLPDRDA-DTVIKAICVTLIVAAADTTVVTLTWAIALLLNNRDVLKKAQDELDIQVGTK-RQVNGSDMRNLVYLQAMIK  308 (454)
Q Consensus       231 ~~~~~~~~-~~~i~~~~~~~~~ag~~tta~~l~~~l~~L~~~pe~q~~l~~Ei~~~~~~~-~~~~~~~~~~lp~l~a~i~  308 (454)
                      .   +..+ ++++.+++.++++||+|||+++++|++++|++||++|+|+++||+++++++ +.++.+++++||||+|||+
T Consensus       298 ~---~~~lt~~~i~~~~~~l~~AG~dTTa~~l~~~l~~L~~~P~~q~kl~~Ei~~v~~~~~~~~~~~~~~~lpyl~avi~  374 (519)
T PLN00168        298 G---DRALTDDEIVNLCSEFLNAGTDTTSTALQWIMAELVKNPSIQSKLHDEIKAKTGDDQEEVSEEDVHKMPYLKAVVL  374 (519)
T ss_pred             c---cCCCCHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCCCHHHhhCChHHHHHHH
Confidence            1   3457 999999999999999999999999999999999999999999999999753 5689999999999999999


Q ss_pred             HHhhcCCCCcCCCcccccccccccceEeCCCCeEEeehhhhhcCCCCCCCCCCCCCCCcCCCCCC--cCc-cCCCcceec
Q 012878          309 ETMRLYPALPLLLPHESIEECTVNGYHVPAGTQLFVNAWKIQRDPCVWEEPCQFQPERFLTTHKD--IDV-RGQNFELIP  385 (454)
Q Consensus       309 E~lRl~~~~~~~~~R~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~~~--~~~-~~~~~~~~~  385 (454)
                      |+||++|++++.++|.+.+|++++||.|||||.|.++++++||||++||||++|+||||+++...  .+. ......|+|
T Consensus       375 EtlRl~p~~~~~~~R~~~~d~~~~g~~IpkGt~v~~~~~~~~~d~~~~~~p~~F~PeRf~~~~~~~~~~~~~~~~~~~~p  454 (519)
T PLN00168        375 EGLRKHPPAHFVLPHKAAEDMEVGGYLIPKGATVNFMVAEMGRDEREWERPMEFVPERFLAGGDGEGVDVTGSREIRMMP  454 (519)
T ss_pred             HHhhcCCCCcccCCccCCCCccCCCEEECCCCEEEEChHHHhcCccccCCccccCcccCCCCCCCccccccccCCcceeC
Confidence            99999999998878999999999999999999999999999999999999999999999975311  111 113468999


Q ss_pred             ccCCCCCCCchhHHHHHHHHHHHHHhhcceeeCCCCCCCCcccccCceeccCCCeEEEEeecCC
Q 012878          386 FGSGRRMCPAVSYGLQVMQLMLASLVHGFDFTTPSGEPVDMAETMGLTSAKATPLEVLVSPRLS  449 (454)
Q Consensus       386 FG~G~r~C~G~~la~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~  449 (454)
                      ||.|+|.|+|++||++|++++++.|+++|++++.++.++++....+.+..++.++++++++|+.
T Consensus       455 FG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~  518 (519)
T PLN00168        455 FGVGRRICAGLGIAMLHLEYFVANMVREFEWKEVPGDEVDFAEKREFTTVMAKPLRARLVPRRT  518 (519)
T ss_pred             CCCCCCCCCcHHHHHHHHHHHHHHHHHHccceeCCCCcCChhhhceeEEeecCCcEEEEEeccC
Confidence            9999999999999999999999999999999988765444433234455567789999999974


No 10 
>PLN03112 cytochrome P450 family protein; Provisional
Probab=100.00  E-value=1.1e-72  Score=552.18  Aligned_cols=444  Identities=35%  Similarity=0.626  Sum_probs=354.8

Q ss_pred             CccccCCeEEEEcCCeeEEEecCHHHHHHHHHhCCcccCCCCcchhhhhhccCCeeeEeCCCChhHHHHHHHHHHhhcCh
Q 012878            1 MADKYGPIFTMKLGVKQALMVSNWEIAKECFTTNDKAFASRPKTMAMELLEYNFSVISFAPYGNYWRQSLKIATIELLSS   80 (454)
Q Consensus         1 l~~~yG~v~~i~~~~~~~vvv~dp~~~~~il~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~R~~~~~~~f~~   80 (454)
                      |+++|||+|++++|+++.|+++||+++++|+.++.+.|++++..........+...++++.+|+.|+++||++.+++|+.
T Consensus        60 ~~~kyG~v~~~~~g~~~~v~v~dpe~~~~vl~~~~~~f~~~~~~~~~~~~~~g~~~~~~~~~g~~wk~~Rr~~~~~~f~~  139 (514)
T PLN03112         60 LCKKYGPLVYLRLGSVDAITTDDPELIREILLRQDDVFASRPRTLAAVHLAYGCGDVALAPLGPHWKRMRRICMEHLLTT  139 (514)
T ss_pred             HHHHhCCeEEEEecCccEEEECCHHHHHHHHHhCCcccccCCCcccceeeccCCCceEeCCCCHHHHHHHHHHHHHhcCH
Confidence            57899999999999999999999999999999887888887764322221222234557778999999999976578999


Q ss_pred             HHHHHhHHHHHHHHHHHHHHHHhccccCCCCCcceeecHHHHHHHHHHHHHHHHHhCCCCCC-c---chhHHHHHHHHHH
Q 012878           81 HRLEKLKHVREYEVKASIQRLYKNCVSSSSSRKVVLVDMIHWLEGTVLDVVLRIIAGKRHTS-Q---SQEINDWQRQITK  156 (454)
Q Consensus        81 ~~~~~~~~~~~~~~~~li~~l~~~~~~~~~g~~~~~vdl~~~~~~~~~~vi~~~~fG~~~~~-~---~~~~~~~~~~~~~  156 (454)
                      +.++.+.+.+.+.++.+++.+.+.   ...+ +  ++|+.+.++.+++++++.++||.++.. .   .+....+...+..
T Consensus       140 ~~l~~~~~~~~~~~~~lv~~l~~~---~~~~-~--~vd~~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~  213 (514)
T PLN03112        140 KRLESFAKHRAEEARHLIQDVWEA---AQTG-K--PVNLREVLGAFSMNNVTRMLLGKQYFGAESAGPKEAMEFMHITHE  213 (514)
T ss_pred             HHHHHhhHHHHHHHHHHHHHHHHh---hccC-C--eeeHHHHHHHHHHHHHHHHHcCCccccccccchHHHHHHHHHHHH
Confidence            999999999999999999987664   3344 5  899999999999999999999998741 1   1233456666666


Q ss_pred             HHHhhcchhhhhhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhhhhcCC-CCCCchHHHHHHhccccccccCCC
Q 012878          157 FTALTGQFVVSDALPFLRWLDIGGYERLMSKTAKYFDIILQEWLDEHKMKRVSGE-VKGDEDFIYVLLSLLDDNAEQLPD  235 (454)
Q Consensus       157 ~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~~~~~d~l~~ll~~~~~~~~~~~~  235 (454)
                      +........+..++|++.++......+...+..+.+.+++.+.++++++...... .....|+++.|++...++.    .
T Consensus       214 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~----~  289 (514)
T PLN03112        214 LFRLLGVIYLGDYLPAWRWLDPYGCEKKMREVEKRVDEFHDKIIDEHRRARSGKLPGGKDMDFVDVLLSLPGENG----K  289 (514)
T ss_pred             HHHHcCCCcHHHhChHHHhcCcccHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCCccchHHHHHHHhhcccc----c
Confidence            5544333333445676555532233455667778888888888887765431111 1234699999998654321    2


Q ss_pred             CCc-HHHHHHHHHHHHHccccchHHHHHHHHHHHHhChhHHHHHHHHHhHhhcCCCCCCcccccCcHHHHHHHHHHhhcC
Q 012878          236 RDA-DTVIKAICVTLIVAAADTTVVTLTWAIALLLNNRDVLKKAQDELDIQVGTKRQVNGSDMRNLVYLQAMIKETMRLY  314 (454)
Q Consensus       236 ~~~-~~~i~~~~~~~~~ag~~tta~~l~~~l~~L~~~pe~q~~l~~Ei~~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~  314 (454)
                      ..+ ++++.++++++++||+|||+++++|++++|++||++|+|+++||++++++++.++.+++++||||+|||+|++|++
T Consensus       290 ~~l~~~~i~~~~~~~~~AG~dTTa~~l~~~l~~L~~~P~vq~kl~~Ei~~~~~~~~~~t~~~l~~L~yl~avi~EtlRl~  369 (514)
T PLN03112        290 EHMDDVEIKALMQDMIAAATDTSAVTNEWAMAEVIKNPRVLRKIQEELDSVVGRNRMVQESDLVHLNYLRCVVRETFRMH  369 (514)
T ss_pred             cCCCHHHHHHHHHHHhccccccHHHHHHHHHHHHHhChHHHHHHHHHHHHhcCCCCcCChhhhccCcHHHHHHHHHhccC
Confidence            246 8999999999999999999999999999999999999999999999998777799999999999999999999999


Q ss_pred             CCCcCCCcccccccccccceEeCCCCeEEeehhhhhcCCCCCCCCCCCCCCCcCCCCCC-cC-ccCCCcceecccCCCCC
Q 012878          315 PALPLLLPHESIEECTVNGYHVPAGTQLFVNAWKIQRDPCVWEEPCQFQPERFLTTHKD-ID-VRGQNFELIPFGSGRRM  392 (454)
Q Consensus       315 ~~~~~~~~R~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~~~-~~-~~~~~~~~~~FG~G~r~  392 (454)
                      |++++.++|.+.+|++++|+.|||||.|.++.+++||||++||||++|+||||+.+.+. .. .......++|||.|+|.
T Consensus       370 p~~~~~~~R~~~~d~~i~g~~IPkGt~v~~~~~~~h~d~~~~~dP~~F~PeRf~~~~~~~~~~~~~~~~~~~pFg~G~R~  449 (514)
T PLN03112        370 PAGPFLIPHESLRATTINGYYIPAKTRVFINTHGLGRNTKIWDDVEEFRPERHWPAEGSRVEISHGPDFKILPFSAGKRK  449 (514)
T ss_pred             CCcccccccccCCCeeEcCEEeCCCCEEEEehHHhhCCcccCCChhhcCCcccCCCCCCccccccCCCcceeCCCCCCCC
Confidence            99998768999999999999999999999999999999999999999999998764311 11 01134679999999999


Q ss_pred             CCchhHHHHHHHHHHHHHhhcceeeCCCCC---CCCcccccCceeccCCCeEEEEeecCCCCCCC
Q 012878          393 CPAVSYGLQVMQLMLASLVHGFDFTTPSGE---PVDMAETMGLTSAKATPLEVLVSPRLSASSYG  454 (454)
Q Consensus       393 C~G~~la~~~~~~~l~~ll~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~  454 (454)
                      |+|++||++|++++++.|+++|++++.++.   .+......+++.++++++++++.||+.---||
T Consensus       450 C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~  514 (514)
T PLN03112        450 CPGAPLGVTMVLMALARLFHCFDWSPPDGLRPEDIDTQEVYGMTMPKAKPLRAVATPRLAPHLYG  514 (514)
T ss_pred             CCcHHHHHHHHHHHHHHHHHheeeecCCCCCcccCCCccccCcccccCCCeEEEeecCCcccccC
Confidence            999999999999999999999999987653   23333344566677889999999998766665


No 11 
>PLN02966 cytochrome P450 83A1
Probab=100.00  E-value=3.7e-72  Score=545.89  Aligned_cols=432  Identities=31%  Similarity=0.584  Sum_probs=334.4

Q ss_pred             CccccCCeEEEEcCCeeEEEecCHHHHHHHHHhCCcccCCCCcchhhhhhccCCeeeEeCCCChhHHHHHHHHHHhhcCh
Q 012878            1 MADKYGPIFTMKLGVKQALMVSNWEIAKECFTTNDKAFASRPKTMAMELLEYNFSVISFAPYGNYWRQSLKIATIELLSS   80 (454)
Q Consensus         1 l~~~yG~v~~i~~~~~~~vvv~dp~~~~~il~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~R~~~~~~~f~~   80 (454)
                      |+++||++|++++|+.++|+++||+++++|+.++...|.+++.......+..+...+.+..+|+.|+++|+++..++|++
T Consensus        58 ~~~~yG~v~~~~~g~~~~vvi~~p~~i~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~  137 (502)
T PLN02966         58 WAKKYGPILSYRIGSRTMVVISSAELAKELLKTQDVNFADRPPHRGHEFISYGRRDMALNHYTPYYREIRKMGMNHLFSP  137 (502)
T ss_pred             HHHHhCCeEEEecCCCcEEEECCHHHHHHHHHhCcccccCCCCCccceeeccCcceeeeCCCCHHHHHHHHHHHHHhcCH
Confidence            67899999999999999999999999999999887778766654333333233333445667999999999944489999


Q ss_pred             HHHHHhHHHHHHHHHHHHHHHHhccccCCCCCcceeecHHHHHHHHHHHHHHHHHhCCCCCCcchhHHHHHHHHHHHHHh
Q 012878           81 HRLEKLKHVREYEVKASIQRLYKNCVSSSSSRKVVLVDMIHWLEGTVLDVVLRIIAGKRHTSQSQEINDWQRQITKFTAL  160 (454)
Q Consensus        81 ~~~~~~~~~~~~~~~~li~~l~~~~~~~~~g~~~~~vdl~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~  160 (454)
                      ..++++.+.+.+.++++++.|.+.   ...+ +  ++|+.+++..+++|+++.++||.+++..++....+.+.+......
T Consensus       138 ~~l~~~~~~i~~~~~~l~~~l~~~---~~~~-~--~vdl~~~~~~~t~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~  211 (502)
T PLN02966        138 TRVATFKHVREEEARRMMDKINKA---ADKS-E--VVDISELMLTFTNSVVCRQAFGKKYNEDGEEMKRFIKILYGTQSV  211 (502)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHh---ccCC-C--ceeHHHHHHHHHHHHHHHHHhCCccCccchHHHHHHHHHHHHHHH
Confidence            999999999999999999999775   3344 5  899999999999999999999999864333344555555554444


Q ss_pred             hcchhhhhhcccccccc-ccchHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCchHHHHHHhccccccccCCCCCc-
Q 012878          161 TGQFVVSDALPFLRWLD-IGGYERLMSKTAKYFDIILQEWLDEHKMKRVSGEVKGDEDFIYVLLSLLDDNAEQLPDRDA-  238 (454)
Q Consensus       161 ~~~~~~~~~~P~l~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~-  238 (454)
                      .....+..++|++..+. +....+......+.+.+++.+.+++..+.....  ....|+++.|++..++...   +..+ 
T Consensus       212 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--~~~~~~l~~l~~~~~~~~~---~~~l~  286 (502)
T PLN02966        212 LGKIFFSDFFPYCGFLDDLSGLTAYMKECFERQDTYIQEVVNETLDPKRVK--PETESMIDLLMEIYKEQPF---ASEFT  286 (502)
T ss_pred             hCcccHHHhhchhhhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHhccccc--cccccHHHHHHHHHhccCc---CCCCC
Confidence            33333344455433221 111222333445556666777666654321011  2346899999976543211   2346 


Q ss_pred             HHHHHHHHHHHHHccccchHHHHHHHHHHHHhChhHHHHHHHHHhHhhcC--CCCCCcccccCcHHHHHHHHHHhhcCCC
Q 012878          239 DTVIKAICVTLIVAAADTTVVTLTWAIALLLNNRDVLKKAQDELDIQVGT--KRQVNGSDMRNLVYLQAMIKETMRLYPA  316 (454)
Q Consensus       239 ~~~i~~~~~~~~~ag~~tta~~l~~~l~~L~~~pe~q~~l~~Ei~~~~~~--~~~~~~~~~~~lp~l~a~i~E~lRl~~~  316 (454)
                      ++++.++++++++||+|||+++++|++++|++||++|+|+++||++++++  ++.++.+++++||||+|||+|+||++|+
T Consensus       287 ~~~i~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~q~kl~~Ei~~v~~~~~~~~~~~~dl~~lpyl~avi~E~LRl~p~  366 (502)
T PLN02966        287 VDNVKAVILDIVVAGTDTAAAAVVWGMTYLMKYPQVLKKAQAEVREYMKEKGSTFVTEDDVKNLPYFRALVKETLRIEPV  366 (502)
T ss_pred             HHHHHHHHHHHHhccccchHHHHHHHHHHHHhCHHHHHHHHHHHHHHhcccCCCcCCHhhccCCcHHHHHHHHHhccCCC
Confidence            89999999999999999999999999999999999999999999999874  2357999999999999999999999999


Q ss_pred             CcCCCcccccccccccceEeCCCCeEEeehhhhhcCCCCC-CCCCCCCCCCcCCCCCCcCccCCCcceecccCCCCCCCc
Q 012878          317 LPLLLPHESIEECTVNGYHVPAGTQLFVNAWKIQRDPCVW-EEPCQFQPERFLTTHKDIDVRGQNFELIPFGSGRRMCPA  395 (454)
Q Consensus       317 ~~~~~~R~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~~-~dp~~F~P~R~l~~~~~~~~~~~~~~~~~FG~G~r~C~G  395 (454)
                      +++.++|.+.+|++++||.|||||.|.++++++||||++| |||++|+||||+++..+  .......|+|||.|+|.|+|
T Consensus       367 v~~~~~R~~~~d~~l~g~~IP~Gt~V~~~~~~~~rdp~~~g~dP~~F~PeRwl~~~~~--~~~~~~~~~pFg~G~R~C~G  444 (502)
T PLN02966        367 IPLLIPRACIQDTKIAGYDIPAGTTVNVNAWAVSRDEKEWGPNPDEFRPERFLEKEVD--FKGTDYEFIPFGSGRRMCPG  444 (502)
T ss_pred             cccccCcccCCCeeEccEEECCCCEEEEecccccCCcccccCChhhCChhhhcCCCCC--cCCCcCCccCCCCCCCCCCC
Confidence            9997689999999999999999999999999999999999 99999999999975421  11245789999999999999


Q ss_pred             hhHHHHHHHHHHHHHhhcceeeCCCCC---CCCcccccCceeccCCCeEEEEe
Q 012878          396 VSYGLQVMQLMLASLVHGFDFTTPSGE---PVDMAETMGLTSAKATPLEVLVS  445 (454)
Q Consensus       396 ~~la~~~~~~~l~~ll~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~  445 (454)
                      ++||++|++++++.|+++|++++.++.   .++++...++...++..+.++.+
T Consensus       445 ~~~A~~el~~~la~ll~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  497 (502)
T PLN02966        445 MRLGAAMLEVPYANLLLNFNFKLPNGMKPDDINMDVMTGLAMHKSQHLKLVPE  497 (502)
T ss_pred             HHHHHHHHHHHHHHHHHhceeeCCCCCCcccCCcccccCeeeccCCCeEEEEE
Confidence            999999999999999999999988763   24444444555534444544443


No 12 
>PLN02738 carotene beta-ring hydroxylase
Probab=100.00  E-value=3e-72  Score=551.14  Aligned_cols=425  Identities=24%  Similarity=0.376  Sum_probs=326.2

Q ss_pred             CccccCCeEEEEcCCeeEEEecCHHHHHHHHHhCCcccCCCCcchhhhhhccCCeeeEeCCCChhHHHHHHHHHHhhcCh
Q 012878            1 MADKYGPIFTMKLGVKQALMVSNWEIAKECFTTNDKAFASRPKTMAMELLEYNFSVISFAPYGNYWRQSLKIATIELLSS   80 (454)
Q Consensus         1 l~~~yG~v~~i~~~~~~~vvv~dp~~~~~il~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~R~~~~~~~f~~   80 (454)
                      ||++|||||++++|+.++|+|+||+.+++||.++...|.+++.........  +.++ +..+|+.|+.+|+++. ++|+.
T Consensus       160 lh~kYGpI~ri~lGp~~~vvIsDpe~i~eIl~~~~~~f~k~~~~~~~~~~~--g~~l-~~~dge~wr~rRr~l~-p~Fs~  235 (633)
T PLN02738        160 LFLTYGGIFRLTFGPKSFLIVSDPSIAKHILRDNSKAYSKGILAEILEFVM--GKGL-IPADGEIWRVRRRAIV-PALHQ  235 (633)
T ss_pred             HHHHhCCEEEEEeCCCCEEEECCHHHHHHHHhhCcccCCCcchHHHHhhcc--CCce-ecCCcHHHHHHHHhcc-HhhhH
Confidence            689999999999999999999999999999998767777654432222221  2344 4567999999999998 89999


Q ss_pred             HHHHHhHHHHHHHHHHHHHHHHhccccCCCCCcceeecHHHHHHHHHHHHHHHHHhCCCCCC-cchhHHHHHHHHHHHHH
Q 012878           81 HRLEKLKHVREYEVKASIQRLYKNCVSSSSSRKVVLVDMIHWLEGTVLDVVLRIIAGKRHTS-QSQEINDWQRQITKFTA  159 (454)
Q Consensus        81 ~~~~~~~~~~~~~~~~li~~l~~~~~~~~~g~~~~~vdl~~~~~~~~~~vi~~~~fG~~~~~-~~~~~~~~~~~~~~~~~  159 (454)
                      ..++.+.+.+.+.++.++++|.+.   ...+ +  ++|+.+.+..+++|+|+.++||.+++. .++.  .+...+.....
T Consensus       236 ~~v~~l~~~i~~~v~~L~~~L~~~---~~~g-~--~vdl~~~~~~lt~DVI~~~~FG~~~~~~~~~~--~~~~~~~~~~~  307 (633)
T PLN02738        236 KYVAAMISLFGQASDRLCQKLDAA---ASDG-E--DVEMESLFSRLTLDIIGKAVFNYDFDSLSNDT--GIVEAVYTVLR  307 (633)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHH---hcCC-C--cEeHHHHHHHHHHHHHHHHHhCCCccccccch--HHHHHHHHHHH
Confidence            999999999999999999999875   4445 6  899999999999999999999999862 1111  22222222222


Q ss_pred             hhcchhhhhhccccccc--cccchHHHHHHHHHHHHHHHHHHHHHHHhhhhc-------C-CCCCCchHHHHHHhccccc
Q 012878          160 LTGQFVVSDALPFLRWL--DIGGYERLMSKTAKYFDIILQEWLDEHKMKRVS-------G-EVKGDEDFIYVLLSLLDDN  229 (454)
Q Consensus       160 ~~~~~~~~~~~P~l~~~--~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-------~-~~~~~~d~l~~ll~~~~~~  229 (454)
                      .........+++|+.++  ......+...+..+.+..++.++++..+.....       . ....+.|+++.|++..   
T Consensus       308 ~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~l~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~dil~~Ll~~~---  384 (633)
T PLN02738        308 EAEDRSVSPIPVWEIPIWKDISPRQRKVAEALKLINDTLDDLIAICKRMVEEEELQFHEEYMNERDPSILHFLLASG---  384 (633)
T ss_pred             HHHHHhhcchhhhhhhHHhhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhcccccccchHHHHHHHcC---
Confidence            11110111111221111  111122344445555566666655543321100       0 0123458999998752   


Q ss_pred             cccCCCCCc-HHHHHHHHHHHHHccccchHHHHHHHHHHHHhChhHHHHHHHHHhHhhcCCCCCCcccccCcHHHHHHHH
Q 012878          230 AEQLPDRDA-DTVIKAICVTLIVAAADTTVVTLTWAIALLLNNRDVLKKAQDELDIQVGTKRQVNGSDMRNLVYLQAMIK  308 (454)
Q Consensus       230 ~~~~~~~~~-~~~i~~~~~~~~~ag~~tta~~l~~~l~~L~~~pe~q~~l~~Ei~~~~~~~~~~~~~~~~~lp~l~a~i~  308 (454)
                            ..+ ++++.++++.+++||+|||+++|+|++++|++||++|+||++||++++++ +.++++++++||||+|||+
T Consensus       385 ------~~ls~~~L~~e~~~ll~AG~eTTA~tLt~~l~~L~~~Pevq~kLreEl~~v~~~-~~~t~edL~kLPYL~AVIk  457 (633)
T PLN02738        385 ------DDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKEPSVVAKLQEEVDSVLGD-RFPTIEDMKKLKYTTRVIN  457 (633)
T ss_pred             ------CCCCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHhCHHHHHHHHHHHHHhcCC-CCCCHHHHccCHHHHHHHH
Confidence                  135 88999999999999999999999999999999999999999999999984 6789999999999999999


Q ss_pred             HHhhcCCCCcCCCcccccccccccceEeCCCCeEEeehhhhhcCCCCCCCCCCCCCCCcCCCCCCcCccCCCcceecccC
Q 012878          309 ETMRLYPALPLLLPHESIEECTVNGYHVPAGTQLFVNAWKIQRDPCVWEEPCQFQPERFLTTHKDIDVRGQNFELIPFGS  388 (454)
Q Consensus       309 E~lRl~~~~~~~~~R~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~~~~~~~~~~~~~~~FG~  388 (454)
                      |+|||+|+++.. +|.+.+|.+++||.|||||.|.++.+.+||||++||||++|+||||+....+.........++|||.
T Consensus       458 EtLRL~p~~p~~-~R~a~~d~~i~gy~IPkGT~V~~s~~~ihrdp~ifpdP~~F~PERWl~~~~~~~~~~~~~~~vpFG~  536 (633)
T PLN02738        458 ESLRLYPQPPVL-IRRSLENDMLGGYPIKRGEDIFISVWNLHRSPKHWDDAEKFNPERWPLDGPNPNETNQNFSYLPFGG  536 (633)
T ss_pred             HHHhcCCCcccc-ceeeccCceECCEEECCCCEEEecHHHHhCCccccCCccccCcccCCCCCCCccccCCCCceeCCCC
Confidence            999999999997 6999999999999999999999999999999999999999999999854211111225578999999


Q ss_pred             CCCCCCchhHHHHHHHHHHHHHhhcceeeCCCCCCCCcccccCceeccCCCeEEEEeecCC
Q 012878          389 GRRMCPAVSYGLQVMQLMLASLVHGFDFTTPSGEPVDMAETMGLTSAKATPLEVLVSPRLS  449 (454)
Q Consensus       389 G~r~C~G~~la~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~  449 (454)
                      |+|.|+|++||++|++++|+.|+++|+|++.++.+ ++....+.++.++.++++++++|.+
T Consensus       537 G~R~CiG~~lA~~El~l~LA~Llr~F~~el~~~~~-~~~~~~~~~~~p~~~l~v~l~~R~~  596 (633)
T PLN02738        537 GPRKCVGDMFASFENVVATAMLVRRFDFQLAPGAP-PVKMTTGATIHTTEGLKMTVTRRTK  596 (633)
T ss_pred             CCCCCcCHHHHHHHHHHHHHHHHHhCeeEeCCCCC-CcccccceEEeeCCCcEEEEEECCC
Confidence            99999999999999999999999999999887532 2222234566678899999999963


No 13 
>PTZ00404 cytochrome P450; Provisional
Probab=100.00  E-value=1.6e-72  Score=547.06  Aligned_cols=420  Identities=23%  Similarity=0.386  Sum_probs=333.6

Q ss_pred             CccccCCeEEEEcCCeeEEEecCHHHHHHHHHhCCcccCCCCcchhhhhhccCCeeeEeCCCChhHHHHHHHHHHhhcCh
Q 012878            1 MADKYGPIFTMKLGVKQALMVSNWEIAKECFTTNDKAFASRPKTMAMELLEYNFSVISFAPYGNYWRQSLKIATIELLSS   80 (454)
Q Consensus         1 l~~~yG~v~~i~~~~~~~vvv~dp~~~~~il~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~R~~~~~~~f~~   80 (454)
                      |+++|||||++++|+++.|+++||+++++|+.++...|..++.......... +.++ ++.+|+.|+++|+++. ++|+.
T Consensus        57 ~~~~yG~i~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~r~~~~~~~~~~~-~~~l-~~~~g~~w~~~Rk~~~-~~f~~  133 (482)
T PTZ00404         57 MSKKYGGIFRIWFADLYTVVLSDPILIREMFVDNFDNFSDRPKIPSIKHGTF-YHGI-VTSSGEYWKRNREIVG-KAMRK  133 (482)
T ss_pred             HHHHhCCeeEEEecCCCEEEECCHHHHHHHHHhcchhhcCCCCcceeeeecc-CCce-eccChHHHHHHHHHHH-HHHhh
Confidence            5789999999999999999999999999999987667777665433211111 3344 4568999999999998 89999


Q ss_pred             HHHHHhHHHHHHHHHHHHHHHHhccccCCCCCcceeecHHHHHHHHHHHHHHHHHhCCCCCCcc----hhHHHHHHHHHH
Q 012878           81 HRLEKLKHVREYEVKASIQRLYKNCVSSSSSRKVVLVDMIHWLEGTVLDVVLRIIAGKRHTSQS----QEINDWQRQITK  156 (454)
Q Consensus        81 ~~~~~~~~~~~~~~~~li~~l~~~~~~~~~g~~~~~vdl~~~~~~~~~~vi~~~~fG~~~~~~~----~~~~~~~~~~~~  156 (454)
                      ..++++.+.+.+.++.+++.|.+.   ...+ +  .+|+.+++..+++|+++.++||.+++..+    +....+...+..
T Consensus       134 ~~l~~~~~~i~~~~~~l~~~l~~~---~~~~-~--~vd~~~~~~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~  207 (482)
T PTZ00404        134 TNLKHIYDLLDDQVDVLIESMKKI---ESSG-E--TFEPRYYLTKFTMSAMFKYIFNEDISFDEDIHNGKLAELMGPMEQ  207 (482)
T ss_pred             hccccHHHHHHHHHHHHHHHHHHH---HhcC-C--ccCHHHHHHHHHHHHHHHHHhccccccccccchhHHHHHHHHHHH
Confidence            999999999999999999999764   3334 5  79999999999999999999999886211    122455666666


Q ss_pred             HHHhhcchhhhhhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCchHHHHHHhccccccccCCCC
Q 012878          157 FTALTGQFVVSDALPFLRWLDIGGYERLMSKTAKYFDIILQEWLDEHKMKRVSGEVKGDEDFIYVLLSLLDDNAEQLPDR  236 (454)
Q Consensus       157 ~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~  236 (454)
                      ++...........++++.... ........+..+.+.+++.+.++++++.. +.  ....|+++.|++...+.      .
T Consensus       208 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~--~~~~dll~~ll~~~~~~------~  277 (482)
T PTZ00404        208 VFKDLGSGSLFDVIEITQPLY-YQYLEHTDKNFKKIKKFIKEKYHEHLKTI-DP--EVPRDLLDLLIKEYGTN------T  277 (482)
T ss_pred             HHHHhCCCchhhhhhHhhhhh-HHHHHHHHHHHHHHHHHHHHHHHHHHHcc-CC--CCcccHHHHHHHHhccC------C
Confidence            555443322222222222110 01112234556677777777777665543 11  23568999999864321      1


Q ss_pred             Cc-HHHHHHHHHHHHHccccchHHHHHHHHHHHHhChhHHHHHHHHHhHhhcCCCCCCcccccCcHHHHHHHHHHhhcCC
Q 012878          237 DA-DTVIKAICVTLIVAAADTTVVTLTWAIALLLNNRDVLKKAQDELDIQVGTKRQVNGSDMRNLVYLQAMIKETMRLYP  315 (454)
Q Consensus       237 ~~-~~~i~~~~~~~~~ag~~tta~~l~~~l~~L~~~pe~q~~l~~Ei~~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~~  315 (454)
                      .. .+++++++.++++||+|||+++++|++++|++||++|+||++||++++++.+.++.+++++||||+|||+|+||++|
T Consensus       278 ~~~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~vq~kl~~Ei~~v~~~~~~~~~~~l~~L~yl~avi~EtlRl~p  357 (482)
T PTZ00404        278 DDDILSILATILDFFLAGVDTSATSLEWMVLMLCNYPEIQEKAYNEIKSTVNGRNKVLLSDRQSTPYTVAIIKETLRYKP  357 (482)
T ss_pred             cccHHHHHHHHHHHHHhccchHHHHHHHHHHHHHcCcHHHHHHHHHHHHHhcCCCCCCccccccChHHHHHHHHHHHhcC
Confidence            12 34588999999999999999999999999999999999999999999987667899999999999999999999999


Q ss_pred             CCcCCCcccccccccc-cceEeCCCCeEEeehhhhhcCCCCCCCCCCCCCCCcCCCCCCcCccCCCcceecccCCCCCCC
Q 012878          316 ALPLLLPHESIEECTV-NGYHVPAGTQLFVNAWKIQRDPCVWEEPCQFQPERFLTTHKDIDVRGQNFELIPFGSGRRMCP  394 (454)
Q Consensus       316 ~~~~~~~R~~~~d~~~-~g~~ip~Gt~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~~~~~~~~~~~~~~~FG~G~r~C~  394 (454)
                      +++..++|.+.+|+++ +||.|||||.|.++.+++||||++||||++|+||||+++.       ....|+|||.|+|.|+
T Consensus       358 ~~~~~~~R~~~~d~~l~~g~~Ip~Gt~V~~~~~a~hrdp~~~~dP~~F~PeRwl~~~-------~~~~~~pFg~G~R~C~  430 (482)
T PTZ00404        358 VSPFGLPRSTSNDIIIGGGHFIPKDAQILINYYSLGRNEKYFENPEQFDPSRFLNPD-------SNDAFMPFSIGPRNCV  430 (482)
T ss_pred             CcccccceeccCCEEecCCeEECCCCEEEeeHHHhhCCccccCCccccCccccCCCC-------CCCceeccCCCCCCCc
Confidence            9998668999999999 9999999999999999999999999999999999998653       3578999999999999


Q ss_pred             chhHHHHHHHHHHHHHhhcceeeCCCCCCCCcccccCceeccCCCeEEEEeec
Q 012878          395 AVSYGLQVMQLMLASLVHGFDFTTPSGEPVDMAETMGLTSAKATPLEVLVSPR  447 (454)
Q Consensus       395 G~~la~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r  447 (454)
                      |++||++|++++++.|+++|+++++++++.......+++.. +.++++++++|
T Consensus       431 G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~R  482 (482)
T PTZ00404        431 GQQFAQDELYLAFSNIILNFKLKSIDGKKIDETEEYGLTLK-PNKFKVLLEKR  482 (482)
T ss_pred             cHHHHHHHHHHHHHHHHHhcEEecCCCCCCCcccccceeec-CCCceeeeecC
Confidence            99999999999999999999999877654443333455555 66899999987


No 14 
>PLN02655 ent-kaurene oxidase
Probab=100.00  E-value=5.8e-72  Score=539.49  Aligned_cols=429  Identities=25%  Similarity=0.443  Sum_probs=341.8

Q ss_pred             CccccCCeEEEEcCCeeEEEecCHHHHHHHHHhCCcccCCCCcchhhhhhccCCeeeEeCCCChhHHHHHHHHHHhhcCh
Q 012878            1 MADKYGPIFTMKLGVKQALMVSNWEIAKECFTTNDKAFASRPKTMAMELLEYNFSVISFAPYGNYWRQSLKIATIELLSS   80 (454)
Q Consensus         1 l~~~yG~v~~i~~~~~~~vvv~dp~~~~~il~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~R~~~~~~~f~~   80 (454)
                      |+++||+||++++|++++|+|+||+++++|+.++...|++++.......+..++..+.+..+|+.|+++||.+.+++|+.
T Consensus        28 ~~~~yG~i~~~~~g~~~~vvv~~pe~~k~il~~~~~~f~~r~~~~~~~~~~~~~~~~~~~~~g~~wr~~Rr~~~~~~~s~  107 (466)
T PLN02655         28 WSEIYGPIYTIRTGASSVVVLNSTEVAKEAMVTKFSSISTRKLSKALTVLTRDKSMVATSDYGDFHKMVKRYVMNNLLGA  107 (466)
T ss_pred             HHHHhCCeEEEEECCEeEEEeCCHHHHHHHHHhcCchhcCCChhhHHHHHhcCCCceeeCCCcHHHHHHHHHHHHHhcCc
Confidence            57899999999999999999999999999999988888887654433434333334555556999999998887678888


Q ss_pred             HHHHHhHHHHHHHHHHHHHHHHhccccCCCCCcceeecHHHHHHHHHHHHHHHHHhCCCCCCcc-hh-------HHHHHH
Q 012878           81 HRLEKLKHVREYEVKASIQRLYKNCVSSSSSRKVVLVDMIHWLEGTVLDVVLRIIAGKRHTSQS-QE-------INDWQR  152 (454)
Q Consensus        81 ~~~~~~~~~~~~~~~~li~~l~~~~~~~~~g~~~~~vdl~~~~~~~~~~vi~~~~fG~~~~~~~-~~-------~~~~~~  152 (454)
                      ..++.+.+.+.+.++.+++.+.+.+.+. .+ +  ++|+.+.+..+++|+++.++||.+++..+ +.       ...+..
T Consensus       108 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~-~--~vd~~~~~~~~t~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~  183 (466)
T PLN02655        108 NAQKRFRDTRDMLIENMLSGLHALVKDD-PH-S--PVNFRDVFENELFGLSLIQALGEDVESVYVEELGTEISKEEIFDV  183 (466)
T ss_pred             hHHHHhHHHHHHHHHHHHHHHHhhcccc-CC-C--ceeHHHHHHHHHHHHHHHHHhccccccccccccccchhhHHHHHH
Confidence            8889999999999999999887652111 23 4  89999999999999999999999876211 11       012233


Q ss_pred             HHHHHHHhhcchhhhhhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCchHHHHHHhcccccccc
Q 012878          153 QITKFTALTGQFVVSDALPFLRWLDIGGYERLMSKTAKYFDIILQEWLDEHKMKRVSGEVKGDEDFIYVLLSLLDDNAEQ  232 (454)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~  232 (454)
                      .+..+........+...+|++.|++.....+........+.+++.+++++++++...+  ....|+++.|++..      
T Consensus       184 ~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--~~~~d~l~~ll~~~------  255 (466)
T PLN02655        184 LVHDMMMCAIEVDWRDFFPYLSWIPNKSFETRVQTTEFRRTAVMKALIKQQKKRIARG--EERDCYLDFLLSEA------  255 (466)
T ss_pred             HHHHHHHHhCCcchhhhhhhhhhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC--CCcccHHHHHHhcc------
Confidence            3333433333333445677766664332333344444555678888888777654222  23458999999753      


Q ss_pred             CCCCCc-HHHHHHHHHHHHHccccchHHHHHHHHHHHHhChhHHHHHHHHHhHhhcCCCCCCcccccCcHHHHHHHHHHh
Q 012878          233 LPDRDA-DTVIKAICVTLIVAAADTTVVTLTWAIALLLNNRDVLKKAQDELDIQVGTKRQVNGSDMRNLVYLQAMIKETM  311 (454)
Q Consensus       233 ~~~~~~-~~~i~~~~~~~~~ag~~tta~~l~~~l~~L~~~pe~q~~l~~Ei~~~~~~~~~~~~~~~~~lp~l~a~i~E~l  311 (454)
                         ..+ ++++.+++.++++||+|||+++++|++++|++||++|+++++||+++++++. ++.+++++||||+|||+|||
T Consensus       256 ---~~ls~~~i~~~~~~~~~ag~dtta~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~~~-~~~~~l~~l~yl~a~i~Etl  331 (466)
T PLN02655        256 ---THLTDEQLMMLVWEPIIEAADTTLVTTEWAMYELAKNPDKQERLYREIREVCGDER-VTEEDLPNLPYLNAVFHETL  331 (466)
T ss_pred             ---CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHhCCCC-CCHHHHhcChHHHHHHHHHh
Confidence               136 8999999999999999999999999999999999999999999999998644 99999999999999999999


Q ss_pred             hcCCCCcCCCcccccccccccceEeCCCCeEEeehhhhhcCCCCCCCCCCCCCCCcCCCCCCcCccCCCcceecccCCCC
Q 012878          312 RLYPALPLLLPHESIEECTVNGYHVPAGTQLFVNAWKIQRDPCVWEEPCQFQPERFLTTHKDIDVRGQNFELIPFGSGRR  391 (454)
Q Consensus       312 Rl~~~~~~~~~R~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~~~~~~~~~~~~~~~FG~G~r  391 (454)
                      |++|+++..++|.+.+|++++|+.|||||.|.++.+++||||++|+||++|+||||+++....   .....++|||+|+|
T Consensus       332 Rl~p~~~~~~~r~~~~d~~~~g~~ip~gt~v~~~~~~~~~d~~~~~~p~~F~PeR~~~~~~~~---~~~~~~~~Fg~G~r  408 (466)
T PLN02655        332 RKYSPVPLLPPRFVHEDTTLGGYDIPAGTQIAINIYGCNMDKKRWENPEEWDPERFLGEKYES---ADMYKTMAFGAGKR  408 (466)
T ss_pred             ccCCCcCCCCCcccCCCcccCCEEECCCCEEEecHHHhcCCcccCCChhccCccccCCCCccc---CCcccccCCCCCCC
Confidence            999999998789999999999999999999999999999999999999999999999764211   13468999999999


Q ss_pred             CCCchhHHHHHHHHHHHHHhhcceeeCCCCCCCCcccccCceeccCCCeEEEEeecCC
Q 012878          392 MCPAVSYGLQVMQLMLASLVHGFDFTTPSGEPVDMAETMGLTSAKATPLEVLVSPRLS  449 (454)
Q Consensus       392 ~C~G~~la~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~  449 (454)
                      .|||++||+.|++++++.||++|++++.++... .....+++..++.++.+++++|.+
T Consensus       409 ~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~r~~  465 (466)
T PLN02655        409 VCAGSLQAMLIACMAIARLVQEFEWRLREGDEE-KEDTVQLTTQKLHPLHAHLKPRGS  465 (466)
T ss_pred             CCCcHHHHHHHHHHHHHHHHHHeEEEeCCCCcc-ccchhheeEeecCCcEEEEeecCC
Confidence            999999999999999999999999998766422 233445666688899999999864


No 15 
>KOG0159 consensus Cytochrome P450 CYP11/CYP12/CYP24/CYP27 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=3.3e-71  Score=501.66  Aligned_cols=424  Identities=23%  Similarity=0.312  Sum_probs=352.1

Q ss_pred             CccccCCeEEEE-cCCeeEEEecCHHHHHHHHHhCCcccCCCC-cc-hhh--hhhccCCeeeEeCCCChhHHHHHHHHHH
Q 012878            1 MADKYGPIFTMK-LGVKQALMVSNWEIAKECFTTNDKAFASRP-KT-MAM--ELLEYNFSVISFAPYGNYWRQSLKIATI   75 (454)
Q Consensus         1 l~~~yG~v~~i~-~~~~~~vvv~dp~~~~~il~~~~~~f~~~~-~~-~~~--~~~~~~~~~~~~~~~~~~w~~~R~~~~~   75 (454)
                      ++++|||||+.. +|++..|.+.||++++.++.+++. +..|| .. ...  .-.. ++...++..+|+.|.+.|..+++
T Consensus        82 ~~~~YG~I~~~~~~G~~~~V~v~~p~d~E~v~r~EG~-~P~Rp~~~~~w~~~rd~~-~~~~Gl~~~~G~~W~~~Rs~ln~  159 (519)
T KOG0159|consen   82 LHQKYGPIFREGMLGRVDLVHVYNPDDVEKVFRNEGK-YPFRPLLIEPWVAYRDFR-GGVCGLFLLEGPEWQRLRSALNP  159 (519)
T ss_pred             HHHHcCceeeeccCCCCCeEEeeCHHHHHHHHhcCCC-CCCcccccchhhhhHHhh-ccCCCcccCCCHHHHHHHHHhch
Confidence            378999999999 899999999999999999998854 45554 11 111  1122 22234567789999999999998


Q ss_pred             hhcChHHHHHhHHHHHHHHHHHHHHHHhccccCCCCCcceeecHHHHHHHHHHHHHHHHHhCCCCCC----cchhHHHHH
Q 012878           76 ELLSSHRLEKLKHVREYEVKASIQRLYKNCVSSSSSRKVVLVDMIHWLEGTVLDVVLRIIAGKRHTS----QSQEINDWQ  151 (454)
Q Consensus        76 ~~f~~~~~~~~~~~~~~~~~~li~~l~~~~~~~~~g~~~~~vdl~~~~~~~~~~vi~~~~fG~~~~~----~~~~~~~~~  151 (454)
                      ..++++.+++|.|.+++.+++++..+.......... .  +.|+.+.+.+++++.||.++||.+++.    .+++...++
T Consensus       160 ~ll~P~~v~~yl~~l~~V~~DF~~~l~~~r~~~~~~-~--~~D~~~~l~~wslEsi~~V~l~~rlG~L~~~~~~~a~~fi  236 (519)
T KOG0159|consen  160 LLLQPQAVRRYLPQLNAVSDDFVERLRAQRDPERGE-L--VPDFAQELYRWSLESICLVLLGTRLGLLGESPPSEAQQFI  236 (519)
T ss_pred             hhcCHHHHHHHhhHHHHHHHHHHHHHHHHhcccccc-c--chhHHHHHHHHHHHHHHHHHHhcccccccCCCCHHHHHHH
Confidence            889999999999999999999999999873221122 3  889999999999999999999999993    345677888


Q ss_pred             HHHHHHHHhhcchhhhhhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCC--CCchHHHHHHhccccc
Q 012878          152 RQITKFTALTGQFVVSDALPFLRWLDIGGYERLMSKTAKYFDIILQEWLDEHKMKRVSGEVK--GDEDFIYVLLSLLDDN  229 (454)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~--~~~d~l~~ll~~~~~~  229 (454)
                      .++..++......   .+.|.+++....+.++++.++.+.+.+++.+.|++..++....+..  +....+..++...   
T Consensus       237 ~ai~~~F~~s~~l---~~~p~l~r~~~t~~wk~~~~~~D~i~~~~~~~Id~~l~~l~~~~~~~~~~~~~l~~~L~~~---  310 (519)
T KOG0159|consen  237 DAIKKMFESSAQL---MLMPSLWRYFPTKVWKDFVRAWDQIFDVGDKYIDNALEELEKQDSAGSEYTGSLLELLLRK---  310 (519)
T ss_pred             HHHHHHHHhHHHH---HhcchHHHhCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHc---
Confidence            8888888776542   2235444443355678899999999999999999988776333211  2233444444321   


Q ss_pred             cccCCCCCc-HHHHHHHHHHHHHccccchHHHHHHHHHHHHhChhHHHHHHHHHhHhhcC-CCCCCcccccCcHHHHHHH
Q 012878          230 AEQLPDRDA-DTVIKAICVTLIVAAADTTVVTLTWAIALLLNNRDVLKKAQDELDIQVGT-KRQVNGSDMRNLVYLQAMI  307 (454)
Q Consensus       230 ~~~~~~~~~-~~~i~~~~~~~~~ag~~tta~~l~~~l~~L~~~pe~q~~l~~Ei~~~~~~-~~~~~~~~~~~lp~l~a~i  307 (454)
                             .+ .+++...++++++||.|||++++.|+||+|++||++|++|++|+.++..+ ...++.+++.+||||+|||
T Consensus       311 -------~l~~k~~~~~~~dll~aGvDTTs~tl~~~Ly~LarnP~~Q~~L~~Ei~~~~p~~~~~~~~~~l~~~pyLrAcI  383 (519)
T KOG0159|consen  311 -------ELSRKDAKANVMDLLAAGVDTTSNTLLWALYELARNPEVQQRLREEILAVLPSGNSELTQKALTNMPYLRACI  383 (519)
T ss_pred             -------cCCHHHHHHHHHHHHHHhccchHHHHHHHHHHHhcChHHHHHHHHHHHhhCCCcccccchHHHhhCHHHHHHH
Confidence                   24 78899999999999999999999999999999999999999999999987 5779999999999999999


Q ss_pred             HHHhhcCCCCcCCCcccccccccccceEeCCCCeEEeehhhhhcCCCCCCCCCCCCCCCcCCCCCCcCccCCCcceeccc
Q 012878          308 KETMRLYPALPLLLPHESIEECTVNGYHVPAGTQLFVNAWKIQRDPCVWEEPCQFQPERFLTTHKDIDVRGQNFELIPFG  387 (454)
Q Consensus       308 ~E~lRl~~~~~~~~~R~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~~~~~~~~~~~~~~~FG  387 (454)
                      |||+||||++++. .|+..+|.+++||.|||||.|.++.+.+.+||++|++|++|+|||||.++.   ...++..++|||
T Consensus       384 KEtlRlyPv~~~~-~R~l~~D~vL~gY~vPagT~V~l~~~~~~r~~~~F~~p~~F~PeRWL~~~~---~~~~pF~~LPFG  459 (519)
T KOG0159|consen  384 KETLRLYPVVPGN-GRVLPKDLVLSGYHVPAGTLVVLFLYVLGRNPAYFPDPEEFLPERWLKPST---KTIHPFASLPFG  459 (519)
T ss_pred             Hhhhceecccccc-ccccchhceeccceecCCCeEEEeehhhccChhhCCCccccChhhhccccc---CCCCCceecCCC
Confidence            9999999999998 799999999999999999999999999999999999999999999998862   234789999999


Q ss_pred             CCCCCCCchhHHHHHHHHHHHHHhhcceeeCCCCCCCCcccccCceeccCCCeEEEEeecC
Q 012878          388 SGRRMCPAVSYGLQVMQLMLASLVHGFDFTTPSGEPVDMAETMGLTSAKATPLEVLVSPRL  448 (454)
Q Consensus       388 ~G~r~C~G~~la~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~  448 (454)
                      .|+|+|+||++|.+|+.++|+.|+++|+++..++.++++..  .++..|..++.++|++|.
T Consensus       460 fG~R~C~GRRiAElEl~llLarllr~f~V~~~~~~pv~~~~--~~il~P~~~l~f~f~~r~  518 (519)
T KOG0159|consen  460 FGPRMCLGRRIAELELHLLLARLLRNFKVEFLHEEPVEYVY--RFILVPNRPLRFKFRPRN  518 (519)
T ss_pred             CCccccchHHHHHHHHHHHHHHHHHhcceeecCCCCcccee--EEEEcCCCCcceeeeeCC
Confidence            99999999999999999999999999999988766565544  355678999999999986


No 16 
>PLN02290 cytokinin trans-hydroxylase
Probab=100.00  E-value=3.1e-71  Score=542.11  Aligned_cols=425  Identities=21%  Similarity=0.321  Sum_probs=333.2

Q ss_pred             CccccCCeEEEEcCCeeEEEecCHHHHHHHHHhCCcccCCCCcchhhhhhccCCeeeEeCCCChhHHHHHHHHHHhhcCh
Q 012878            1 MADKYGPIFTMKLGVKQALMVSNWEIAKECFTTNDKAFASRPKTMAMELLEYNFSVISFAPYGNYWRQSLKIATIELLSS   80 (454)
Q Consensus         1 l~~~yG~v~~i~~~~~~~vvv~dp~~~~~il~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~R~~~~~~~f~~   80 (454)
                      |+++|||+|++|+|+.+.|+++||+++++++.++ ..+..++...........+.++ +..+|+.|+++||++. ++|+.
T Consensus        89 ~~~~yG~i~~~~~g~~~~vvv~dp~~v~~il~~~-~~~~~r~~~~~~~~~~~~g~~l-~~~~g~~Wk~~Rk~~~-~~f~~  165 (516)
T PLN02290         89 WSKQYGKRFIYWNGTEPRLCLTETELIKELLTKY-NTVTGKSWLQQQGTKHFIGRGL-LMANGADWYHQRHIAA-PAFMG  165 (516)
T ss_pred             HHHHhCCeEEEccCCccEEEECCHHHHHHHHhcC-CCCCCCcchhhhHHHHHhcCCc-cccCchHHHHHHhhcc-cccCH
Confidence            4689999999999999999999999999999987 4455555322111111112344 4467999999999998 89999


Q ss_pred             HHHHHhHHHHHHHHHHHHHHHHhccccCCCCCcceeecHHHHHHHHHHHHHHHHHhCCCCCCcchhHHHHHHHHHHHHHh
Q 012878           81 HRLEKLKHVREYEVKASIQRLYKNCVSSSSSRKVVLVDMIHWLEGTVLDVVLRIIAGKRHTSQSQEINDWQRQITKFTAL  160 (454)
Q Consensus        81 ~~~~~~~~~~~~~~~~li~~l~~~~~~~~~g~~~~~vdl~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~  160 (454)
                      ..++.+.+.+.++++.+++.|.+.   ...+++  ++|+.+++..+++|++++++||.+++.. +   ++...+..+...
T Consensus       166 ~~l~~~~~~i~~~~~~l~~~l~~~---~~~~~~--~vd~~~~~~~~~~~vi~~~~fG~~~~~~-~---~~~~~~~~~~~~  236 (516)
T PLN02290        166 DRLKGYAGHMVECTKQMLQSLQKA---VESGQT--EVEIGEYMTRLTADIISRTEFDSSYEKG-K---QIFHLLTVLQRL  236 (516)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHH---HhcCCc--eEEhHHHHHHHHHHHHHHHHcCCccccc-h---HHHHHHHHHHHH
Confidence            999999999999999999999864   222214  7999999999999999999999988522 1   222222222222


Q ss_pred             hcchhhhhhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhhhhcCC-CCCCchHHHHHHhccccccccCCCCCc-
Q 012878          161 TGQFVVSDALPFLRWLDIGGYERLMSKTAKYFDIILQEWLDEHKMKRVSGE-VKGDEDFIYVLLSLLDDNAEQLPDRDA-  238 (454)
Q Consensus       161 ~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~~~~~d~l~~ll~~~~~~~~~~~~~~~-  238 (454)
                      .........+|++.+++ ....+......+.+.+++.+.|+++++....+. .....|+++.+++...+...  .+..+ 
T Consensus       237 ~~~~~~~~~~p~~~~~p-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~--~~~~l~  313 (516)
T PLN02290        237 CAQATRHLCFPGSRFFP-SKYNREIKSLKGEVERLLMEIIQSRRDCVEIGRSSSYGDDLLGMLLNEMEKKRS--NGFNLN  313 (516)
T ss_pred             HHHhhhhhcCchhhhCC-ChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHhccccCC--CCCCCC
Confidence            11111112245444442 223345566777888899999988876542211 12346999999986542211  02346 


Q ss_pred             HHHHHHHHHHHHHccccchHHHHHHHHHHHHhChhHHHHHHHHHhHhhcCCCCCCcccccCcHHHHHHHHHHhhcCCCCc
Q 012878          239 DTVIKAICVTLIVAAADTTVVTLTWAIALLLNNRDVLKKAQDELDIQVGTKRQVNGSDMRNLVYLQAMIKETMRLYPALP  318 (454)
Q Consensus       239 ~~~i~~~~~~~~~ag~~tta~~l~~~l~~L~~~pe~q~~l~~Ei~~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~~~~~  318 (454)
                      ++++.+++.++++||+|||+++++|++++|++||++|+|+++||++++|++ .++.+++++||||+|||+||||++|+++
T Consensus       314 ~~~i~~~~~~~~~AG~dTta~tl~~~l~~L~~~P~vq~kl~~Ei~~v~~~~-~~~~~~l~~lpYl~avi~EtlRl~p~~~  392 (516)
T PLN02290        314 LQLIMDECKTFFFAGHETTALLLTWTLMLLASNPTWQDKVRAEVAEVCGGE-TPSVDHLSKLTLLNMVINESLRLYPPAT  392 (516)
T ss_pred             HHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhCCC-CCCHHHHhcChHHHHHHHHHHHcCCCcc
Confidence            888999999999999999999999999999999999999999999999864 7899999999999999999999999999


Q ss_pred             CCCcccccccccccceEeCCCCeEEeehhhhhcCCCCC-CCCCCCCCCCcCCCCCCcCccCCCcceecccCCCCCCCchh
Q 012878          319 LLLPHESIEECTVNGYHVPAGTQLFVNAWKIQRDPCVW-EEPCQFQPERFLTTHKDIDVRGQNFELIPFGSGRRMCPAVS  397 (454)
Q Consensus       319 ~~~~R~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~~-~dp~~F~P~R~l~~~~~~~~~~~~~~~~~FG~G~r~C~G~~  397 (454)
                      +. +|.+.+|++++|+.|||||.|.++.+++||||++| +||++|+||||++...     .....|+|||.|+|.|+|++
T Consensus       393 ~~-~R~~~~d~~i~g~~IP~Gt~V~~~~~~~~rdp~~~~~dP~~F~PeRfl~~~~-----~~~~~~~pFG~G~R~C~G~~  466 (516)
T PLN02290        393 LL-PRMAFEDIKLGDLHIPKGLSIWIPVLAIHHSEELWGKDANEFNPDRFAGRPF-----APGRHFIPFAAGPRNCIGQA  466 (516)
T ss_pred             cc-ceeecCCeeECCEEECCCCEEEecHHHhcCChhhhCCChhhcCccccCCCCC-----CCCCeEecCCCCCCCCccHH
Confidence            75 99999999999999999999999999999999999 8999999999995421     13457999999999999999


Q ss_pred             HHHHHHHHHHHHHhhcceeeCCCCCCCCcccccCceeccCCCeEEEEeecCC
Q 012878          398 YGLQVMQLMLASLVHGFDFTTPSGEPVDMAETMGLTSAKATPLEVLVSPRLS  449 (454)
Q Consensus       398 la~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~  449 (454)
                      ||++|++++++.|+++|++++.++.+..  ....+++.|+.++++++++|+.
T Consensus       467 lA~~el~l~la~ll~~f~~~~~~~~~~~--~~~~~~~~p~~~~~~~~~~~~~  516 (516)
T PLN02290        467 FAMMEAKIILAMLISKFSFTISDNYRHA--PVVVLTIKPKYGVQVCLKPLNP  516 (516)
T ss_pred             HHHHHHHHHHHHHHHhceEeeCCCcccC--ccceeeecCCCCCeEEEEeCCC
Confidence            9999999999999999999987753221  1224667888999999999973


No 17 
>PLN03018 homomethionine N-hydroxylase
Probab=100.00  E-value=7.1e-70  Score=528.94  Aligned_cols=432  Identities=27%  Similarity=0.431  Sum_probs=332.0

Q ss_pred             CCeEEEEcCCeeEEEecCHHHHHHHHHhCCcccCCCCcchhhhhhccCCeeeEeCCCChhHHHHHHHHHHhhc-ChHHHH
Q 012878            6 GPIFTMKLGVKQALMVSNWEIAKECFTTNDKAFASRPKTMAMELLEYNFSVISFAPYGNYWRQSLKIATIELL-SSHRLE   84 (454)
Q Consensus         6 G~v~~i~~~~~~~vvv~dp~~~~~il~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~R~~~~~~~f-~~~~~~   84 (454)
                      |+||++++|++++|+|+||++++++|++++..|++++.......++.++.++++..+|+.|+++|++++ +.| +.....
T Consensus        76 g~i~~~~lg~~~~vvvsdpe~ikevl~~~~~~f~~rp~~~~~~~l~~~~~~i~~~~~G~~Wk~~Rk~l~-~~~~~~~~~~  154 (534)
T PLN03018         76 TDIACFNFAGTHTITINSDEIAREAFRERDADLADRPQLSIMETIGDNYKSMGTSPYGEQFMKMKKVIT-TEIMSVKTLN  154 (534)
T ss_pred             CCeEEEEeCCccEEEECCHHHHHHHHHhCcHhhcCCCCchhhhhhccCCCceEecCCCHHHHHHHHHHH-HHhcCHHHHH
Confidence            899999999999999999999999999888889988865555545444445777777999999999998 555 555555


Q ss_pred             HhHHHHHHHHHHHHHHHHhccccCCCCCcceeecHHHHHHHHHHHHHHHHHhCCCCCCc------chh-HHHHHHHHHHH
Q 012878           85 KLKHVREYEVKASIQRLYKNCVSSSSSRKVVLVDMIHWLEGTVLDVVLRIIAGKRHTSQ------SQE-INDWQRQITKF  157 (454)
Q Consensus        85 ~~~~~~~~~~~~li~~l~~~~~~~~~g~~~~~vdl~~~~~~~~~~vi~~~~fG~~~~~~------~~~-~~~~~~~~~~~  157 (454)
                      .+.+.++.+++.+++.+.+.   ...+ +  ++|+.+.+.++++|++++++||.+++..      +.. ...+...+...
T Consensus       155 ~~~~~~~~~~~~l~~~l~~~---~~~~-~--~vd~~~~~~~~t~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (534)
T PLN03018        155 MLEAARTIEADNLIAYIHSM---YQRS-E--TVDVRELSRVYGYAVTMRMLFGRRHVTKENVFSDDGRLGKAEKHHLEVI  228 (534)
T ss_pred             HHHHHHHHHHHHHHHHHHHh---cccC-C--ceeHHHHHHHHHHHHHHHHHhCCccccccccccccccchhHHHHHHHHH
Confidence            55666667889999999864   3334 5  7999999999999999999999987521      111 11111112211


Q ss_pred             HH---hhcchhhhhhcc-ccccccccchHHHHHHHHHHHHHHHHHHHHHHHhhhhcC-CCCCCchHHHHHHhcccccccc
Q 012878          158 TA---LTGQFVVSDALP-FLRWLDIGGYERLMSKTAKYFDIILQEWLDEHKMKRVSG-EVKGDEDFIYVLLSLLDDNAEQ  232 (454)
Q Consensus       158 ~~---~~~~~~~~~~~P-~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~d~l~~ll~~~~~~~~~  232 (454)
                      ..   ........+.+| |+.++.............+.+.+++.++++++++...+. +.....|+++.|++...+.   
T Consensus       229 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~---  305 (534)
T PLN03018        229 FNTLNCLPGFSPVDYVERWLRGWNIDGQEERAKVNVNLVRSYNNPIIDERVELWREKGGKAAVEDWLDTFITLKDQN---  305 (534)
T ss_pred             HHHHHHhCCCcHHHHhhhhhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCcccHHHHHHHhhccc---
Confidence            11   111111223334 444322122334445556677888888888876543111 1112468999999865432   


Q ss_pred             CCCC-Cc-HHHHHHHHHHHHHccccchHHHHHHHHHHHHhChhHHHHHHHHHhHhhcCCCCCCcccccCcHHHHHHHHHH
Q 012878          233 LPDR-DA-DTVIKAICVTLIVAAADTTVVTLTWAIALLLNNRDVLKKAQDELDIQVGTKRQVNGSDMRNLVYLQAMIKET  310 (454)
Q Consensus       233 ~~~~-~~-~~~i~~~~~~~~~ag~~tta~~l~~~l~~L~~~pe~q~~l~~Ei~~~~~~~~~~~~~~~~~lp~l~a~i~E~  310 (454)
                        +. .+ ++++++++.++++||+|||+++++|++++|+.||++|+|+++||++++++++.++.+++.+||||+|||+|+
T Consensus       306 --~~~~ls~~~i~~~~~~~~~aG~dTta~~l~~~l~~L~~~P~~q~kl~~Ei~~v~~~~~~~~~~~~~~lpyl~a~i~Et  383 (534)
T PLN03018        306 --GKYLVTPDEIKAQCVEFCIAAIDNPANNMEWTLGEMLKNPEILRKALKELDEVVGKDRLVQESDIPNLNYLKACCRET  383 (534)
T ss_pred             --CCCCCCHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHhCCCCCCCHHHhcCCHHHHHHHHHH
Confidence              22 37 999999999999999999999999999999999999999999999999877778999999999999999999


Q ss_pred             hhcCCCCcCCCcccccccccccceEeCCCCeEEeehhhhhcCCCCCCCCCCCCCCCcCCCCCCc---CccCCCcceeccc
Q 012878          311 MRLYPALPLLLPHESIEECTVNGYHVPAGTQLFVNAWKIQRDPCVWEEPCQFQPERFLTTHKDI---DVRGQNFELIPFG  387 (454)
Q Consensus       311 lRl~~~~~~~~~R~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~~~~---~~~~~~~~~~~FG  387 (454)
                      ||++|+++...+|.+.+|++++||.|||||.|.++.+++||||++|+||++|+||||++.++..   ........++|||
T Consensus       384 lRl~p~~~~~~~r~~~~d~~i~G~~IpkGt~V~~~~~~~~~dp~~~~~p~~F~PeRfl~~~~~~~~~~~~~~~~~~lpFG  463 (534)
T PLN03018        384 FRIHPSAHYVPPHVARQDTTLGGYFIPKGSHIHVCRPGLGRNPKIWKDPLVYEPERHLQGDGITKEVTLVETEMRFVSFS  463 (534)
T ss_pred             HhcCCCccccCCcccCCCeeECCEEECCCCEEEEChHHhcCCcccCCCccccCCccCCCCCCccccccccCCCCCccCCC
Confidence            9999999998679999999999999999999999999999999999999999999999754211   0112456899999


Q ss_pred             CCCCCCCchhHHHHHHHHHHHHHhhcceeeCCCCC-CCCcccccCceeccCCCeEEEEeecCCC
Q 012878          388 SGRRMCPAVSYGLQVMQLMLASLVHGFDFTTPSGE-PVDMAETMGLTSAKATPLEVLVSPRLSA  450 (454)
Q Consensus       388 ~G~r~C~G~~la~~~~~~~l~~ll~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~r~~~  450 (454)
                      +|+|.|+|++||++|++++++.|+++|++++.++. ++++....+.+. .+.+++|++++|..+
T Consensus       464 ~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~-~p~~~~v~~~~R~~~  526 (534)
T PLN03018        464 TGRRGCVGVKVGTIMMVMMLARFLQGFNWKLHQDFGPLSLEEDDASLL-MAKPLLLSVEPRLAP  526 (534)
T ss_pred             CCCCCCccHHHHHHHHHHHHHHHHHhceEEeCCCCCCCCcccccccee-cCCCeEEEEEecccc
Confidence            99999999999999999999999999999987653 343432334344 456999999999543


No 18 
>PF00067 p450:  Cytochrome P450 p450 superfamily signature b-class p450 signature mitochondrial p450 signature E-class p450 group I signature E-class p450 group II signature E-class p450 group IV signature;  InterPro: IPR001128 Cytochrome P450 enzymes are a superfamily of haem-containing mono-oxygenases that are found in all kingdoms of life, and which show extraordinary diversity in their reaction chemistry. In mammals, these proteins are found primarily in microsomes of hepatocytes and other cell types, where they oxidise steroids, fatty acids and xenobiotics, and are important for the detoxification and clearance of various compounds, as well as for hormone synthesis and breakdown, cholesterol synthesis and vitamin D metabolism. In plants, these proteins are important for the biosynthesis of several compounds such as hormones, defensive compounds and fatty acids. In bacteria, they are important for several metabolic processes, such as the biosynthesis of antibiotic erythromycin in Saccharopolyspora erythraea (Streptomyces erythraeus). Cytochrome P450 enzymes use haem to oxidise their substrates, using protons derived from NADH or NADPH to split the oxygen so a single atom can be added to a substrate. They also require electrons, which they receive from a variety of redox partners. In certain cases, cytochrome P450 can be fused to its redox partner to produce a bi-functional protein, such as with P450BM-3 from Bacillus megaterium [], which has haem and flavin domains. Organisms produce many different cytochrome P450 enzymes (at least 58 in humans), which together with alternative splicing can provide a wide array of enzymes with different substrate and tissue specificities. Individual cytochrome P450 proteins follow the nomenclature: CYP, followed by a number (family), then a letter (subfamily), and another number (protein); e.g. CYP3A4 is the fourth protein in family 3, subfamily A. In general, family members should share >40% identity, while subfamily members should share >55% identity. Cytochrome P450 proteins can also be grouped by two different schemes. One scheme was based on a taxonomic split: class I (prokaryotic/mitochondrial) and class II (eukaryotic microsomes). The other scheme was based on the number of components in the system: class B (3-components) and class E (2-components). These classes merge to a certain degree. Most prokaryotes and mitochondria (and fungal CYP55) have 3-component systems (class I/class B) - a FAD-containing flavoprotein (NAD(P)H-dependent reductase), an iron-sulphur protein and P450. Most eukaryotic microsomes have 2-component systems (class II/class E) - NADPH:P450 reductase (FAD and FMN-containing flavoprotein) and P450. There are exceptions to this scheme, such as 1-component systems that resemble class E enzymes [, , ]. The class E enzymes can be further subdivided into five sequence clusters, groups I-V, each of which may contain more than one cytochrome P450 family (eg, CYP1 and CYP2 are both found in group I). The divergence of the cytochrome P450 superfamily into B- and E-classes, and further divergence into stable clusters within the E-class, appears to be very ancient, occurring before the appearance of eukaryotes. More information about these proteins can be found at Protein of the Month: Cytochrome P450 [].; GO: 0005506 iron ion binding, 0009055 electron carrier activity, 0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 0020037 heme binding, 0055114 oxidation-reduction process; PDB: 2RFC_B 2RFB_A 3EJB_H 3EJE_H 3EJD_H 1N6B_A 1NR6_A 1DT6_A 3EL3_A 3DBG_B ....
Probab=100.00  E-value=8.3e-71  Score=536.14  Aligned_cols=425  Identities=30%  Similarity=0.535  Sum_probs=344.6

Q ss_pred             CccccCCeEEEEcCCeeEEEecCHHHHHHHHHhCCcccCCCCcchhhhh--hccCCeeeEeCCCChhHHHHHHHHHHhhc
Q 012878            1 MADKYGPIFTMKLGVKQALMVSNWEIAKECFTTNDKAFASRPKTMAMEL--LEYNFSVISFAPYGNYWRQSLKIATIELL   78 (454)
Q Consensus         1 l~~~yG~v~~i~~~~~~~vvv~dp~~~~~il~~~~~~f~~~~~~~~~~~--~~~~~~~~~~~~~~~~w~~~R~~~~~~~f   78 (454)
                      |+++|||||+++++++++|+|+||+++++|+.++...|+.++.......  ....+.++ +..+++.|+.+|+++. +.|
T Consensus        29 ~~~kyG~i~~~~~~~~~~vvv~~pe~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~~~~~~R~~~~-~~~  106 (463)
T PF00067_consen   29 LHKKYGPIFRIWPGGQPIVVVSDPELIKEILRSRSKYFSFRPRPPWFEIFRGPFGGKGL-FFSDGERWRRQRRLLA-PAF  106 (463)
T ss_dssp             HHHHHTSEEEEEETTEEEEEEESHHHHHHHHTTTTTTEEEEHCHHHHHHHHHHHTTTSS-TTSSHHHHHHHHHHHH-HHH
T ss_pred             HHHHhCCEEEEeEecccccccccchhhcccccccccccccccccccccccccccccccc-cccccccccccccccc-ccc
Confidence            5789999999999999999999999999999998777776544333321  11223344 4456799999999998 788


Q ss_pred             ChH-HHHHhHHHHHHHHHHHHHHHHhccccCCCCCcceeecHHHHHHHHHHHHHHHHHhCCCCC-CcchhHHHHHHHHHH
Q 012878           79 SSH-RLEKLKHVREYEVKASIQRLYKNCVSSSSSRKVVLVDMIHWLEGTVLDVVLRIIAGKRHT-SQSQEINDWQRQITK  156 (454)
Q Consensus        79 ~~~-~~~~~~~~~~~~~~~li~~l~~~~~~~~~g~~~~~vdl~~~~~~~~~~vi~~~~fG~~~~-~~~~~~~~~~~~~~~  156 (454)
                      +.. .. ++.+.+.+.++.+++.|.+.   ...+ .  .+|+.++++.+++|+++.++||.+++ ..+.....+...+..
T Consensus       107 ~~~~~~-~~~~~i~~~~~~l~~~l~~~---~~~~-~--~vd~~~~~~~~~~d~i~~~~fG~~~~~~~~~~~~~~~~~~~~  179 (463)
T PF00067_consen  107 SSKKIL-KLEPLIDEEAEELIDQLRKK---AGSS-G--PVDLFDWLRRFALDVIGRVLFGKDFGSLDDEDFEEFLEAFDE  179 (463)
T ss_dssp             SHHHHH-HHHHHHHHHHHHHHHHHHHT---TTSE-S--EEEHHHHHHHHHHHHHHHHHHSSHHHGTTHHHHHHHHHHHHH
T ss_pred             cccccc-cccccccccccccccccccc---cccc-c--eeeeecccccccccccccccccceeeeccccccccccccccc
Confidence            887 55 89999999999999999987   4333 4  79999999999999999999999875 233434566666666


Q ss_pred             HHHhhcc--hhhhhhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCchHHHHHHhcc-ccccccC
Q 012878          157 FTALTGQ--FVVSDALPFLRWLDIGGYERLMSKTAKYFDIILQEWLDEHKMKRVSGEVKGDEDFIYVLLSLL-DDNAEQL  233 (454)
Q Consensus       157 ~~~~~~~--~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~l~~ll~~~-~~~~~~~  233 (454)
                      +......  ..+...+|++.+++ ....+...++.+.+.+++.++++++++.. +.+.....|+++.++... +.+    
T Consensus       180 ~~~~~~~~~~~~~~~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~d~l~~ll~~~~~~~----  253 (463)
T PF00067_consen  180 LFELLSNFFWNLPFFFPWLKYLP-TPLFRRFKRARDRLRKYIKEIIEERREEL-DDGDESRRDLLDSLLQASSDSD----  253 (463)
T ss_dssp             HHHHHHSHHHHHHHHHHHHCTSS-HHHHHHHHHHHHHHHHHHHHHHHHHHHSH-HSSSSSCSSHHHHHHHHHHTTT----
T ss_pred             ccccccccccccccccccccccc-ccccccccccccccccccccccccccccc-cccccccccccccccccccccc----
Confidence            6654432  23445567666654 23456677778889999999999998876 332235779999999987 222    


Q ss_pred             CC-CCc-HHHHHHHHHHHHHccccchHHHHHHHHHHHHhChhHHHHHHHHHhHhhcCCCCCCcccccCcHHHHHHHHHHh
Q 012878          234 PD-RDA-DTVIKAICVTLIVAAADTTVVTLTWAIALLLNNRDVLKKAQDELDIQVGTKRQVNGSDMRNLVYLQAMIKETM  311 (454)
Q Consensus       234 ~~-~~~-~~~i~~~~~~~~~ag~~tta~~l~~~l~~L~~~pe~q~~l~~Ei~~~~~~~~~~~~~~~~~lp~l~a~i~E~l  311 (454)
                       + ..+ ++++.++++.+++||++||+.+++|+|++|++||++|++|++||+++.++++.++.+++++||||+|||+|||
T Consensus       254 -~~~~ls~~~i~~~~~~~~~ag~dtt~~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~~~~~~~l~~l~yl~a~i~Etl  332 (463)
T PF00067_consen  254 -GPSGLSDEEIAAELLTLLFAGHDTTASTLSWTLYELAKNPEVQEKLREEIDSVLGDGREITFEDLSKLPYLDAVIKETL  332 (463)
T ss_dssp             -TTSSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHTTTSSSHHHHHHGTGHHHHHHHHHHH
T ss_pred             -ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence             2 367 9999999999999999999999999999999999999999999999998777899999999999999999999


Q ss_pred             hcCCCCcCCCcccccccccccceEeCCCCeEEeehhhhhcCCCCCCCCCCCCCCCcCCCCCCcCccCCCcceecccCCCC
Q 012878          312 RLYPALPLLLPHESIEECTVNGYHVPAGTQLFVNAWKIQRDPCVWEEPCQFQPERFLTTHKDIDVRGQNFELIPFGSGRR  391 (454)
Q Consensus       312 Rl~~~~~~~~~R~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~~~~~~~~~~~~~~~FG~G~r  391 (454)
                      |++|++++.++|.+.+|++++||.|||||.|+++++++|+||++|+||++|+||||++.+.  ........|+|||.|+|
T Consensus       333 Rl~p~~~~~~~R~~~~d~~l~g~~ip~gt~v~~~~~~~~~d~~~~~dp~~F~P~R~~~~~~--~~~~~~~~~~~Fg~G~r  410 (463)
T PF00067_consen  333 RLYPPVPFSLPRVATEDVTLGGYFIPKGTIVIVSIYALHRDPEYFPDPDEFDPERFLDERG--ISNRPSFAFLPFGAGPR  410 (463)
T ss_dssp             HHSTSSSTEEEEEESSSEEETTEEEETTSEEEEEHHHHTTSTTTSSSTTS--TTGGBTTTS--TBCSSSTTSSTTESSTT
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc--ccccccccccccccccc
Confidence            9999999555899999999999999999999999999999999999999999999998864  11236789999999999


Q ss_pred             CCCchhHHHHHHHHHHHHHhhcceeeCCCCCCCCccccc-CceeccCCCeEEEE
Q 012878          392 MCPAVSYGLQVMQLMLASLVHGFDFTTPSGEPVDMAETM-GLTSAKATPLEVLV  444 (454)
Q Consensus       392 ~C~G~~la~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~  444 (454)
                      .|+|++||++|++++++.||++|++++.++.+....... +++. ++.++.|.|
T Consensus       411 ~C~G~~~A~~~~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~  463 (463)
T PF00067_consen  411 MCPGRNLAMMEMKVFLAKLLRRFDFELVPGSEPEPQEQQNGFLL-PPKPLKVKF  463 (463)
T ss_dssp             S-TTHHHHHHHHHHHHHHHHHHEEEEESTTSSGGEEECSCSSSE-EESSSEEEE
T ss_pred             cchHHHHHHHHHHHHHHHHHHhCEEEECCCCCCCCccccCceEe-eCCCcEEeC
Confidence            999999999999999999999999999776444333332 3333 455676654


No 19 
>PLN02936 epsilon-ring hydroxylase
Probab=100.00  E-value=7.8e-69  Score=519.95  Aligned_cols=424  Identities=25%  Similarity=0.362  Sum_probs=329.8

Q ss_pred             CccccCCeEEEEcCCeeEEEecCHHHHHHHHHhCCcccCCCCcchhhhhhccCCeeeEeCCCChhHHHHHHHHHHhhcCh
Q 012878            1 MADKYGPIFTMKLGVKQALMVSNWEIAKECFTTNDKAFASRPKTMAMELLEYNFSVISFAPYGNYWRQSLKIATIELLSS   80 (454)
Q Consensus         1 l~~~yG~v~~i~~~~~~~vvv~dp~~~~~il~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~R~~~~~~~f~~   80 (454)
                      |+++|||||++++|+++.|+++||+++++|+.+.+..|.+++.......+.  +.++ +..+|+.|+++|++++ ++|+.
T Consensus        45 ~~~~yG~i~~~~~g~~~~vvv~~pe~~~~il~~~~~~f~~~~~~~~~~~~~--~~~i-~~~~g~~wk~~Rk~l~-~~f~~  120 (489)
T PLN02936         45 WMNEYGPVYRLAAGPRNFVVVSDPAIAKHVLRNYGSKYAKGLVAEVSEFLF--GSGF-AIAEGELWTARRRAVV-PSLHR  120 (489)
T ss_pred             HHHHcCCEEEEccCCccEEEEcCHHHHHHHHHhccccccCcchhhhhHHHh--cCcc-ccCCchHHHHHHHhhc-CccCH
Confidence            689999999999999999999999999999988767787665433222222  2344 4467999999999998 89998


Q ss_pred             HHHHHhHH-HHHHHHHHHHHHHHhccccCCCCCcceeecHHHHHHHHHHHHHHHHHhCCCCCCcchhHHHHHHHHHHHHH
Q 012878           81 HRLEKLKH-VREYEVKASIQRLYKNCVSSSSSRKVVLVDMIHWLEGTVLDVVLRIIAGKRHTSQSQEINDWQRQITKFTA  159 (454)
Q Consensus        81 ~~~~~~~~-~~~~~~~~li~~l~~~~~~~~~g~~~~~vdl~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~  159 (454)
                      ..++.+.+ ++.+.++.+++.|.+.   ..++ .  ++|+.++++.+++|+++.++||.+++..+.. .++...+.....
T Consensus       121 ~~l~~~~~~~~~~~~~~l~~~l~~~---~~~g-~--~vd~~~~~~~~~~dvi~~~~fG~~~~~~~~~-~~~~~~~~~~~~  193 (489)
T PLN02936        121 RYLSVMVDRVFCKCAERLVEKLEPV---ALSG-E--AVNMEAKFSQLTLDVIGLSVFNYNFDSLTTD-SPVIQAVYTALK  193 (489)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHH---hcCC-C--ceeHHHHHHHHHHHHHHHHHcCCCccccccC-cHHHHHHHHHHH
Confidence            88888754 7888999999999875   4345 5  8999999999999999999999998732111 233333333322


Q ss_pred             hhcchhhhhhcccccc--c-cccchHHHHHHHHHHHHHHHHHHHHHHHhhhhcCC---------CCCCchHHHHHHhccc
Q 012878          160 LTGQFVVSDALPFLRW--L-DIGGYERLMSKTAKYFDIILQEWLDEHKMKRVSGE---------VKGDEDFIYVLLSLLD  227 (454)
Q Consensus       160 ~~~~~~~~~~~P~l~~--~-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~---------~~~~~d~l~~ll~~~~  227 (454)
                      .... .....+|++.+  + ...+..+...++.+.+.+++.+.++++++......         ...+.|+++.|++..+
T Consensus       194 ~~~~-~~~~~~p~~~~~~l~~~~p~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~  272 (489)
T PLN02936        194 EAET-RSTDLLPYWKVDFLCKISPRQIKAEKAVTVIRETVEDLVDKCKEIVEAEGEVIEGEEYVNDSDPSVLRFLLASRE  272 (489)
T ss_pred             HHHH-hhhccchHHhhHHHhccChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccccCchHHHHHHHhccc
Confidence            2211 11122332211  0 00112345666777888888888877664321110         0124689999986432


Q ss_pred             cccccCCCCCc-HHHHHHHHHHHHHccccchHHHHHHHHHHHHhChhHHHHHHHHHhHhhcCCCCCCcccccCcHHHHHH
Q 012878          228 DNAEQLPDRDA-DTVIKAICVTLIVAAADTTVVTLTWAIALLLNNRDVLKKAQDELDIQVGTKRQVNGSDMRNLVYLQAM  306 (454)
Q Consensus       228 ~~~~~~~~~~~-~~~i~~~~~~~~~ag~~tta~~l~~~l~~L~~~pe~q~~l~~Ei~~~~~~~~~~~~~~~~~lp~l~a~  306 (454)
                               .+ ++++.++++++++||+|||+++++|++++|++||++|+++++|+++++++ +.++.+++++||||+||
T Consensus       273 ---------~~~~~~i~~~~~~~~~aG~dTta~~l~~~l~~L~~~p~~~~kl~~Ei~~~~~~-~~~~~~~~~~lpyl~av  342 (489)
T PLN02936        273 ---------EVSSVQLRDDLLSMLVAGHETTGSVLTWTLYLLSKNPEALRKAQEELDRVLQG-RPPTYEDIKELKYLTRC  342 (489)
T ss_pred             ---------cCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhcC-CCCCHHHHhhCHHHHHH
Confidence                     25 89999999999999999999999999999999999999999999999885 45789999999999999


Q ss_pred             HHHHhhcCCCCcCCCcccccccccccceEeCCCCeEEeehhhhhcCCCCCCCCCCCCCCCcCCCCCCcCccCCCcceecc
Q 012878          307 IKETMRLYPALPLLLPHESIEECTVNGYHVPAGTQLFVNAWKIQRDPCVWEEPCQFQPERFLTTHKDIDVRGQNFELIPF  386 (454)
Q Consensus       307 i~E~lRl~~~~~~~~~R~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~~~~~~~~~~~~~~~F  386 (454)
                      |+||||++|+++..++|.+..|+.++|+.||+||.|+++.+++||||++||||++|+||||+.++...........++||
T Consensus       343 i~EtlRl~p~~~~~~~r~~~~~~~~~g~~Ip~Gt~v~~~~~~~~rd~~~~~dP~~F~PeRwl~~~~~~~~~~~~~~~~pF  422 (489)
T PLN02936        343 INESMRLYPHPPVLIRRAQVEDVLPGGYKVNAGQDIMISVYNIHRSPEVWERAEEFVPERFDLDGPVPNETNTDFRYIPF  422 (489)
T ss_pred             HHHhhhcCCCcccccceeccCccccCCeEECCCCEEEecHHhccCChhhCCCccccCccccCCCCCCccccCCCcceeCC
Confidence            99999999999998777777788889999999999999999999999999999999999999654211112234689999


Q ss_pred             cCCCCCCCchhHHHHHHHHHHHHHhhcceeeCCCCCCCCcccccCceeccCCCeEEEEeecC
Q 012878          387 GSGRRMCPAVSYGLQVMQLMLASLVHGFDFTTPSGEPVDMAETMGLTSAKATPLEVLVSPRL  448 (454)
Q Consensus       387 G~G~r~C~G~~la~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~  448 (454)
                      |.|+|.|+|++||++|++++++.|+++|+++++++.++..  ..+++..++.+++|++++|.
T Consensus       423 g~G~R~C~G~~la~~~~~~~la~ll~~f~~~~~~~~~~~~--~~~~~~~~~~~~~v~~~~R~  482 (489)
T PLN02936        423 SGGPRKCVGDQFALLEAIVALAVLLQRLDLELVPDQDIVM--TTGATIHTTNGLYMTVSRRR  482 (489)
T ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHhCeEEecCCCccce--ecceEEeeCCCeEEEEEeee
Confidence            9999999999999999999999999999999987654433  23355557789999999994


No 20 
>KOG0157 consensus Cytochrome P450 CYP4/CYP19/CYP26 subfamilies [Secondary metabolites biosynthesis, transport and catabolism; Lipid transport and metabolism]
Probab=100.00  E-value=1.3e-69  Score=521.87  Aligned_cols=420  Identities=26%  Similarity=0.449  Sum_probs=333.9

Q ss_pred             ccccCCeEEEEcCCeeEEEecCHHHHHHHHHhCCcccCCCCcch-hh-hhhccCCeeeEeCCCChhHHHHHHHHHHhhcC
Q 012878            2 ADKYGPIFTMKLGVKQALMVSNWEIAKECFTTNDKAFASRPKTM-AM-ELLEYNFSVISFAPYGNYWRQSLKIATIELLS   79 (454)
Q Consensus         2 ~~~yG~v~~i~~~~~~~vvv~dp~~~~~il~~~~~~f~~~~~~~-~~-~~~~~~~~~~~~~~~~~~w~~~R~~~~~~~f~   79 (454)
                      ..+||++|+.|+||.+.|+++||+.+++|+.++...+.+.+.+. .. ..++   .|++++. |+.|+++||+++ ++|+
T Consensus        67 ~~~~~~~~~~~~~~~~~v~~~dp~~~~~Il~~~~~~~~k~~~~~~~~~~~lG---~gll~~~-g~~W~~~Rk~~~-~~f~  141 (497)
T KOG0157|consen   67 LSRYGPIFKTWLGGKPTVVTTDPELIEEILKSSNENYPKGPDYPESLKPWLG---DGLLFSD-GEKWHKHRKLLT-PAFH  141 (497)
T ss_pred             HHHcCchhhhhhcCeeEEEEcCHHHHHHHHhcCcccCCCchhHHHHHHHHhc---CccccCC-chHHHHHHhhcc-Hhhh
Confidence            46899999999999999999999999999976545554444444 33 4443   3566665 999999999998 8999


Q ss_pred             hHHHHHhHHHHHHHHHHHHHHHHhccccCCCCCcceeecHHHHHHHHHHHHHHHHHhCCCC-CCcchhHHHHHHHHHHHH
Q 012878           80 SHRLEKLKHVREYEVKASIQRLYKNCVSSSSSRKVVLVDMIHWLEGTVLDVVLRIIAGKRH-TSQSQEINDWQRQITKFT  158 (454)
Q Consensus        80 ~~~~~~~~~~~~~~~~~li~~l~~~~~~~~~g~~~~~vdl~~~~~~~~~~vi~~~~fG~~~-~~~~~~~~~~~~~~~~~~  158 (454)
                      ...++.+.+.+.+.+..+...+...   . .+ +  .+|+.+.++++++|++|.++||... +.+.+...++..++....
T Consensus       142 ~~~L~~~~~~~~~~~~~~~~~~~~~---~-~~-~--~vd~~~~~~~~tld~i~~~~~G~~~~~~~~~~~~~~~~a~~~~~  214 (497)
T KOG0157|consen  142 FEILKSFVPVFIESSLILLLLLELA---A-SG-E--EVDLQDLLKRLTLDIICKTAMGPESLDAEGPELFEYVQAFDDLT  214 (497)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHh---h-cC-C--eEcHHHHHHHHHHHHHHHHhcCCccccccCCcccHHHHHHHHHH
Confidence            9999999999999999988888774   2 34 3  4999999999999999999999222 112233334555555443


Q ss_pred             Hhhcchhhhhhcc-ccccccccchHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCC---CCCchHHHHHHhccccccccCC
Q 012878          159 ALTGQFVVSDALP-FLRWLDIGGYERLMSKTAKYFDIILQEWLDEHKMKRVSGEV---KGDEDFIYVLLSLLDDNAEQLP  234 (454)
Q Consensus       159 ~~~~~~~~~~~~P-~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~---~~~~d~l~~ll~~~~~~~~~~~  234 (454)
                      ..+.   .....| +..++......++..++.+.+.++++++|+++++.....+.   ....|+++.+.....       
T Consensus       215 ~~~~---~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~iI~~rr~~~~~~~~~~~~~~~d~L~~~~~~~~-------  284 (497)
T KOG0157|consen  215 ELIS---KRINLPLGTKFLYGLKSERKLKKARKILHDFLEKIIRERREELEKEGSGEEKKRLDFLDTLLLEED-------  284 (497)
T ss_pred             HHHH---HHHcCchhhhHHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhHHHHHHHhcc-------
Confidence            3332   233345 33333222256888899999999999999999876532221   234678875332211       


Q ss_pred             CCCc-HHHHHHHHHHHHHccccchHHHHHHHHHHHHhChhHHHHHHHHHhHhhcCCCC-CCcccccCcHHHHHHHHHHhh
Q 012878          235 DRDA-DTVIKAICVTLIVAAADTTVVTLTWAIALLLNNRDVLKKAQDELDIQVGTKRQ-VNGSDMRNLVYLQAMIKETMR  312 (454)
Q Consensus       235 ~~~~-~~~i~~~~~~~~~ag~~tta~~l~~~l~~L~~~pe~q~~l~~Ei~~~~~~~~~-~~~~~~~~lp~l~a~i~E~lR  312 (454)
                       ..+ ++++.+++.++++||+|||+++++|++++|+.||++|+|+++|+++++++... ......++|+||++||+||||
T Consensus       285 -~~l~~~~i~d~v~tf~faG~DTTss~ltw~l~~La~hP~vq~k~~eEi~~i~~~~~~~~~~~~~~~m~yl~~vi~EsLR  363 (497)
T KOG0157|consen  285 -KPLTDEDIRDEVDTFMFAGHDTTSSALTWTLWLLAKHPEVQEKLREEVDEILGNRDDKWEVEKLDQMKYLEMVIKESLR  363 (497)
T ss_pred             -CCCCHHHHHHHHHHheeeccchHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhCCCCCCCChhhhhhhHHHHHHHHHHhc
Confidence             246 89999999999999999999999999999999999999999999999985332 233333369999999999999


Q ss_pred             cCCCCcCCCcccccccccc-cceEeCCCCeEEeehhhhhcCCCCCC-CCCCCCCCCcCCCCCCcCccCCCcceecccCCC
Q 012878          313 LYPALPLLLPHESIEECTV-NGYHVPAGTQLFVNAWKIQRDPCVWE-EPCQFQPERFLTTHKDIDVRGQNFELIPFGSGR  390 (454)
Q Consensus       313 l~~~~~~~~~R~~~~d~~~-~g~~ip~Gt~v~~~~~~~~~d~~~~~-dp~~F~P~R~l~~~~~~~~~~~~~~~~~FG~G~  390 (454)
                      |||++|+. .|.+.+|+++ +||.||||+.|.++++++|||+.+|+ ||++|+||||+++....  ..++.+|+|||+|+
T Consensus       364 Lyppvp~~-~R~~~~d~~l~~g~~IPkG~~V~i~~~~~~r~~~~~~~dp~~F~PeRf~~~~~~~--~~~~~~fipFsaGp  440 (497)
T KOG0157|consen  364 LYPPVPLV-ARKATKDVKLPGGYTIPKGTNVLISIYALHRDPRVWGEDPEEFDPERFLDGEEKA--KRHPFAFIPFSAGP  440 (497)
T ss_pred             cCCCCchh-hcccCCCeEcCCCcEeCCCCEEEEehHHhccCccccCCChhhcCccccCCCCCcC--CCCCccccCCCCCc
Confidence            99999998 7999999999 58999999999999999999999996 99999999999764221  23679999999999


Q ss_pred             CCCCchhHHHHHHHHHHHHHhhcceeeCCCCCCCCcccccCceeccCCCeEEEEeecCC
Q 012878          391 RMCPAVSYGLQVMQLMLASLVHGFDFTTPSGEPVDMAETMGLTSAKATPLEVLVSPRLS  449 (454)
Q Consensus       391 r~C~G~~la~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~  449 (454)
                      |.|+|++||++|+|++++.|+++|++++..+..  ......+++.+..+++|++++|..
T Consensus       441 R~CiG~~fA~lemKv~l~~ll~~f~~~~~~~~~--~~~~~~~~l~~~~gl~v~~~~r~~  497 (497)
T KOG0157|consen  441 RNCIGQKFAMLEMKVVLAHLLRRFRIEPVGGDK--PKPVPELTLRPKNGLKVKLRPRGS  497 (497)
T ss_pred             ccchhHHHHHHHHHHHHHHHHHheEEEecCCCC--ceeeeEEEEEecCCeEEEEEeCCC
Confidence            999999999999999999999999999887643  344556788899999999999963


No 21 
>PLN02500 cytochrome P450 90B1
Probab=100.00  E-value=7.8e-69  Score=521.44  Aligned_cols=406  Identities=16%  Similarity=0.240  Sum_probs=315.4

Q ss_pred             CccccCCeEEEEcCCeeEEEecCHHHHHHHHHhCCcccCCCCcchhhhhhccCCeeeEeCCCChhHHHHHHHHHHhhcCh
Q 012878            1 MADKYGPIFTMKLGVKQALMVSNWEIAKECFTTNDKAFASRPKTMAMELLEYNFSVISFAPYGNYWRQSLKIATIELLSS   80 (454)
Q Consensus         1 l~~~yG~v~~i~~~~~~~vvv~dp~~~~~il~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~R~~~~~~~f~~   80 (454)
                      |+++||++|++++|++++|+++||+++++++++++..|+.+........++  +.++++ .+|+.|+++|+++. +.|+.
T Consensus        71 ~~~~yG~v~~~~~g~~~~vvv~~p~~~~~vl~~~~~~f~~~~~~~~~~~~g--~~~~~~-~~g~~wr~~Rk~~~-~~f~~  146 (490)
T PLN02500         71 HISRYGKIYRSNLFGEPTIVSADAGLNRFILQNEGRLFECSYPRSIGGILG--KWSMLV-LVGDMHRDMRSISL-NFLSH  146 (490)
T ss_pred             HHHHhcccccccccCCCeEEecCHHHHHHHHhCCCCeEEeeCchHHHHHhC--cccccc-cCCHHHHHHHHHHH-HhcCh
Confidence            467999999999999999999999999999998877776443322233333  223444 47999999999997 89999


Q ss_pred             HHHHH-hHHHHHHHHHHHHHHHHhccccCCCCCcceeecHHHHHHHHHHHHHHHHHhCCCCCCcchhHHHHHHHHHHHHH
Q 012878           81 HRLEK-LKHVREYEVKASIQRLYKNCVSSSSSRKVVLVDMIHWLEGTVLDVVLRIIAGKRHTSQSQEINDWQRQITKFTA  159 (454)
Q Consensus        81 ~~~~~-~~~~~~~~~~~li~~l~~~~~~~~~g~~~~~vdl~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~  159 (454)
                      ..++. +.+.+.+.+..+++.|..       + .  .+|+.+.++++++|++++++||.+.+  +.....+...+..+..
T Consensus       147 ~~l~~~~~~~~~~~~~~~~~~~~~-------~-~--~vd~~~~~~~~~~~vi~~~~fg~~~~--~~~~~~~~~~~~~~~~  214 (490)
T PLN02500        147 ARLRTHLLKEVERHTLLVLDSWKE-------N-S--TFSAQDEAKKFTFNLMAKHIMSMDPG--EEETEQLKKEYVTFMK  214 (490)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhCC-------C-C--CEEehHHHHHHHHHHHHHHHhCCCCC--chHHHHHHHHHHHHHh
Confidence            88887 567777777877777643       2 3  78999999999999999999999864  2222233333333322


Q ss_pred             hhcchhhhhhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhhhhcCC-CCCCchHHHHHHhccccccccCCCCCc
Q 012878          160 LTGQFVVSDALPFLRWLDIGGYERLMSKTAKYFDIILQEWLDEHKMKRVSGE-VKGDEDFIYVLLSLLDDNAEQLPDRDA  238 (454)
Q Consensus       160 ~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~~~~~d~l~~ll~~~~~~~~~~~~~~~  238 (454)
                      ....  ....+|+.       ..++..+..+.+.+++.++++++++....+. .....|+++.+++..          .+
T Consensus       215 ~~~~--~~~~~p~~-------~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~----------~l  275 (490)
T PLN02500        215 GVVS--APLNFPGT-------AYRKALKSRATILKFIERKMEERIEKLKEEDESVEEDDLLGWVLKHS----------NL  275 (490)
T ss_pred             hhhc--chhcCCCc-------ccHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCCcchHHHHHHhcc----------CC
Confidence            2111  00112221       1234455677888888888888776431211 123468999999731          25


Q ss_pred             -HHHHHHHHHHHHHccccchHHHHHHHHHHHHhChhHHHHHHHHHhHhhc-----CCCCCCcccccCcHHHHHHHHHHhh
Q 012878          239 -DTVIKAICVTLIVAAADTTVVTLTWAIALLLNNRDVLKKAQDELDIQVG-----TKRQVNGSDMRNLVYLQAMIKETMR  312 (454)
Q Consensus       239 -~~~i~~~~~~~~~ag~~tta~~l~~~l~~L~~~pe~q~~l~~Ei~~~~~-----~~~~~~~~~~~~lp~l~a~i~E~lR  312 (454)
                       ++++++++.++++||+|||+++++|++++|++||++|+|+++|++++++     .+..++.+|+++||||+|||+|+||
T Consensus       276 s~~~i~~~~~~ll~AG~dTta~tl~~~l~~L~~~Pevq~kl~~Ei~~v~~~~~~~~~~~~~~~d~~~lpyl~avikEtlR  355 (490)
T PLN02500        276 STEQILDLILSLLFAGHETSSVAIALAIFFLQGCPKAVQELREEHLEIARAKKQSGESELNWEDYKKMEFTQCVINETLR  355 (490)
T ss_pred             CHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHhhccccCCCCCCCHHHhccCHHHHHHHHHHHh
Confidence             8999999999999999999999999999999999999999999999874     2345899999999999999999999


Q ss_pred             cCCCCcCCCcccccccccccceEeCCCCeEEeehhhhhcCCCCCCCCCCCCCCCcCCCCCCcCc----cCCCcceecccC
Q 012878          313 LYPALPLLLPHESIEECTVNGYHVPAGTQLFVNAWKIQRDPCVWEEPCQFQPERFLTTHKDIDV----RGQNFELIPFGS  388 (454)
Q Consensus       313 l~~~~~~~~~R~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~~~~~~----~~~~~~~~~FG~  388 (454)
                      ++|+++.. +|.+.+|++++||.|||||.|.++.+++||||++|+||++|+||||+++++....    ...+..|+|||.
T Consensus       356 l~P~~~~~-~R~~~~d~~~~G~~IPkGt~V~~~~~~~hrdp~~~~dP~~F~PeRfl~~~~~~~~~~~~~~~~~~~lpFG~  434 (490)
T PLN02500        356 LGNVVRFL-HRKALKDVRYKGYDIPSGWKVLPVIAAVHLDSSLYDQPQLFNPWRWQQNNNRGGSSGSSSATTNNFMPFGG  434 (490)
T ss_pred             cCCCccCe-eeEeCCCceeCCEEECCCCEEEechhhcccCcccCCCccccChhhccCCCcccccccccCCCCCCCcCCCC
Confidence            99999997 8999999999999999999999999999999999999999999999975421110    114578999999


Q ss_pred             CCCCCCchhHHHHHHHHHHHHHhhcceeeCCCCCCCCcccccCceeccCCCeEEEEee
Q 012878          389 GRRMCPAVSYGLQVMQLMLASLVHGFDFTTPSGEPVDMAETMGLTSAKATPLEVLVSP  446 (454)
Q Consensus       389 G~r~C~G~~la~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  446 (454)
                      |+|.|+|++||++|++++++.|+++|++++.++.+. .. .. .+ .++.+++|++++
T Consensus       435 G~R~CiG~~~A~~el~~~la~ll~~f~~~~~~~~~~-~~-~~-~~-~~~~~l~~~~~~  488 (490)
T PLN02500        435 GPRLCAGSELAKLEMAVFIHHLVLNFNWELAEADQA-FA-FP-FV-DFPKGLPIRVRR  488 (490)
T ss_pred             CCCCCCcHHHHHHHHHHHHHHHHhccEEEEcCCCcc-ee-cc-cc-cCCCCceEEEEe
Confidence            999999999999999999999999999998765432 11 11 22 345699999875


No 22 
>PLN02169 fatty acid (omega-1)-hydroxylase/midchain alkane hydroxylase
Probab=100.00  E-value=2.3e-68  Score=516.49  Aligned_cols=420  Identities=18%  Similarity=0.293  Sum_probs=318.4

Q ss_pred             ccCCeEE---EEcCCeeEEEecCHHHHHHHHHhCCcccCCCCcchhhhhhccCCeeeEeCCCChhHHHHHHHHHHhhcCh
Q 012878            4 KYGPIFT---MKLGVKQALMVSNWEIAKECFTTNDKAFASRPKTMAMELLEYNFSVISFAPYGNYWRQSLKIATIELLSS   80 (454)
Q Consensus         4 ~yG~v~~---i~~~~~~~vvv~dp~~~~~il~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~R~~~~~~~f~~   80 (454)
                      +||..++   +|+|+.++|+|+||+++++||.++...|.+++......  ...+.+++ ..+|+.|+++||+++ ++|+.
T Consensus        65 ~~~~~~~~~g~~~g~~~~vvv~dpe~i~~il~~~~~~~~k~~~~~~~~--~~~g~gl~-~~~g~~Wr~~Rk~l~-p~F~~  140 (500)
T PLN02169         65 ASNLTFYFKGPWLSGTDMLFTADPKNIHHILSSNFGNYPKGPEFKKIF--DVLGEGIL-TVDFELWEDLRKSNH-ALFHN  140 (500)
T ss_pred             hCCCcEEEEeeccCCCCeEEEcCHHHHHHHHhhCcccCCCcHHHHHHH--HhhcCccc-ccCcHHHHHHHHHHH-HHhhh
Confidence            4786655   67899999999999999999998766776654332211  11234554 456999999999998 89998


Q ss_pred             HHHHHh--HHHHHHHHHHHHHHHHhccccCCCCCcceeecHHHHHHHHHHHHHHHHHhCCCCCCcc--hhHHHHHHHHHH
Q 012878           81 HRLEKL--KHVREYEVKASIQRLYKNCVSSSSSRKVVLVDMIHWLEGTVLDVVLRIIAGKRHTSQS--QEINDWQRQITK  156 (454)
Q Consensus        81 ~~~~~~--~~~~~~~~~~li~~l~~~~~~~~~g~~~~~vdl~~~~~~~~~~vi~~~~fG~~~~~~~--~~~~~~~~~~~~  156 (454)
                      ..+..+  .+.+.+.++.+++.+.+.   ...+ +  ++|+.+.+.++++|++++++||.+.++.+  .....+...+..
T Consensus       141 ~~~~~~~~~~~~~~~~~~l~~~l~~~---~~~~-~--~vd~~~~~~~~t~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~  214 (500)
T PLN02169        141 QDFIELSLSSNKSKLKEGLVPFLDNA---AHEN-I--IIDLQDVFMRFMFDTSSILMTGYDPMSLSIEMLEVEFGEAADI  214 (500)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHH---HhcC-C--eEeHHHHHHHHHHHHHHhheeCCCccccCCCCCCCHHHHHHHH
Confidence            877643  466777788888888764   3344 5  89999999999999999999999875211  111234333333


Q ss_pred             HHHhhcchhhhhhcccccc----ccccchHHHHHHHHHHHHHHHHHHHHHHHhhhhcC--CCCCCchHHHHHHhcccccc
Q 012878          157 FTALTGQFVVSDALPFLRW----LDIGGYERLMSKTAKYFDIILQEWLDEHKMKRVSG--EVKGDEDFIYVLLSLLDDNA  230 (454)
Q Consensus       157 ~~~~~~~~~~~~~~P~l~~----~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--~~~~~~d~l~~ll~~~~~~~  230 (454)
                      ......   .....|++.+    +...+..++..+..+.+.+++.++|+++++...+.  ......|+++.|++...+..
T Consensus       215 ~~~~~~---~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~r~~~~~~~~~~~~~~~d~l~~ll~~~~~~~  291 (500)
T PLN02169        215 GEEAIY---YRHFKPVILWRLQNWIGIGLERKMRTALATVNRMFAKIISSRRKEEISRAETEPYSKDALTYYMNVDTSKY  291 (500)
T ss_pred             HHHHHH---hHHhccHHHHHHHHHhCCchhhHHHHHHHHHHHHHHHHHHHHHHHhhccccccCCCcCHHHHHHhcccccc
Confidence            322211   1122232211    11123456677888899999999998887642111  01123689999997643210


Q ss_pred             ccCCCCCc-HHHHHHHHHHHHHccccchHHHHHHHHHHHHhChhHHHHHHHHHhHhhcCCCCCCcccccCcHHHHHHHHH
Q 012878          231 EQLPDRDA-DTVIKAICVTLIVAAADTTVVTLTWAIALLLNNRDVLKKAQDELDIQVGTKRQVNGSDMRNLVYLQAMIKE  309 (454)
Q Consensus       231 ~~~~~~~~-~~~i~~~~~~~~~ag~~tta~~l~~~l~~L~~~pe~q~~l~~Ei~~~~~~~~~~~~~~~~~lp~l~a~i~E  309 (454)
                      .  .+..+ ++++.+++.++++||+|||+++++|++++|++||++|+|+++||++++      +.+++.+||||+|||+|
T Consensus       292 ~--~~~~~~~~~i~~~~~~~l~AG~dTTa~tl~w~l~~La~~Pevq~kl~~Ei~~v~------~~~dl~~L~Yl~avi~E  363 (500)
T PLN02169        292 K--LLKPKKDKFIRDVIFSLVLAGRDTTSSALTWFFWLLSKHPQVMAKIRHEINTKF------DNEDLEKLVYLHAALSE  363 (500)
T ss_pred             c--cccCCChHHHHHHHHHHHHhchhHHHHHHHHHHHHHHCCHHHHHHHHHHHHhhC------CHHHHhcCHHHHHHHHH
Confidence            0  01235 788999999999999999999999999999999999999999998863      57899999999999999


Q ss_pred             HhhcCCCCcCCCccccccccc-ccceEeCCCCeEEeehhhhhcCCCCC-CCCCCCCCCCcCCCCCCcCccCCCcceeccc
Q 012878          310 TMRLYPALPLLLPHESIEECT-VNGYHVPAGTQLFVNAWKIQRDPCVW-EEPCQFQPERFLTTHKDIDVRGQNFELIPFG  387 (454)
Q Consensus       310 ~lRl~~~~~~~~~R~~~~d~~-~~g~~ip~Gt~v~~~~~~~~~d~~~~-~dp~~F~P~R~l~~~~~~~~~~~~~~~~~FG  387 (454)
                      |||++|++|.. .|.+.+|.+ ++|+.|||||.|.+++|++||||++| |||++|+||||++++++.. ...+..|+|||
T Consensus       364 tLRl~P~vp~~-~r~~~~d~~~~~G~~IpkGt~v~i~~~~ihrd~~~w~~dP~~F~PeRfl~~~~~~~-~~~~~~~lPFG  441 (500)
T PLN02169        364 SMRLYPPLPFN-HKAPAKPDVLPSGHKVDAESKIVICIYALGRMRSVWGEDALDFKPERWISDNGGLR-HEPSYKFMAFN  441 (500)
T ss_pred             HHhcCCCCCcC-ceecCCCCCccCCEEECCCCEEEEcHHHhhCCccccCCChhhcCccccCCCCCCcc-CCCCccccCCC
Confidence            99999999998 577666655 59999999999999999999999999 8999999999997643211 11367899999


Q ss_pred             CCCCCCCchhHHHHHHHHHHHHHhhcceeeCCCCCCCCcccccCceeccCCCeEEEEeecC
Q 012878          388 SGRRMCPAVSYGLQVMQLMLASLVHGFDFTTPSGEPVDMAETMGLTSAKATPLEVLVSPRL  448 (454)
Q Consensus       388 ~G~r~C~G~~la~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~  448 (454)
                      +|+|.|+|++||++|++++++.|+++|++++.++.++.  ....+++.+++++++++++|.
T Consensus       442 ~GpR~CiG~~~A~~e~k~~la~ll~~f~~~~~~~~~~~--~~~~~~l~~~~gl~l~l~~~~  500 (500)
T PLN02169        442 SGPRTCLGKHLALLQMKIVALEIIKNYDFKVIEGHKIE--AIPSILLRMKHGLKVTVTKKI  500 (500)
T ss_pred             CCCCCCcCHHHHHHHHHHHHHHHHHHCEEEEcCCCCcc--cccceEEecCCCEEEEEEeCC
Confidence            99999999999999999999999999999987654332  233466778999999999983


No 23 
>PLN03195 fatty acid omega-hydroxylase; Provisional
Probab=100.00  E-value=5.5e-68  Score=518.79  Aligned_cols=424  Identities=24%  Similarity=0.318  Sum_probs=320.6

Q ss_pred             cccc---CCeEEEEcCCeeEEEecCHHHHHHHHHhCCcccCCCCcch-hhhhhccCCeeeEeCCCChhHHHHHHHHHHhh
Q 012878            2 ADKY---GPIFTMKLGVKQALMVSNWEIAKECFTTNDKAFASRPKTM-AMELLEYNFSVISFAPYGNYWRQSLKIATIEL   77 (454)
Q Consensus         2 ~~~y---G~v~~i~~~~~~~vvv~dp~~~~~il~~~~~~f~~~~~~~-~~~~~~~~~~~~~~~~~~~~w~~~R~~~~~~~   77 (454)
                      .++|   |++|++++|+.+.|+++||+++++|+.++...|.+++.+. ....+.  +.++ ++.+|+.|+++||+++ ++
T Consensus        58 ~~~~~~~~~~~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~~~~~~~~~~~~~--g~~l-~~~~g~~w~~~Rr~l~-~~  133 (516)
T PLN03195         58 LVEYLSKDRTVVVKMPFTTYTYIADPVNVEHVLKTNFANYPKGEVYHSYMEVLL--GDGI-FNVDGELWRKQRKTAS-FE  133 (516)
T ss_pred             HHHHhccCCcEEEeeCCCCceEecCHHHHHHHHhhCccccCCcHhHHHHHHHHh--cCee-eccCcHHHHHHHHhcc-hh
Confidence            4566   8999999999999999999999999987655565543221 111111  2344 5568999999999997 89


Q ss_pred             cChHHHHHhHHHH-HHHHHHHHHHHHhccccCCCCCcceeecHHHHHHHHHHHHHHHHHhCCCCCCcch--hHHHHHHHH
Q 012878           78 LSSHRLEKLKHVR-EYEVKASIQRLYKNCVSSSSSRKVVLVDMIHWLEGTVLDVVLRIIAGKRHTSQSQ--EINDWQRQI  154 (454)
Q Consensus        78 f~~~~~~~~~~~~-~~~~~~li~~l~~~~~~~~~g~~~~~vdl~~~~~~~~~~vi~~~~fG~~~~~~~~--~~~~~~~~~  154 (454)
                      |+.+.++.+.+.+ .+.++.+++.+.+.   ...+ +  ++|+.+++..+++|+++.++||.+++..++  ....+...+
T Consensus       134 fs~~~l~~~~~~~~~~~~~~l~~~l~~~---~~~~-~--~vd~~~~~~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~  207 (516)
T PLN03195        134 FASKNLRDFSTVVFREYSLKLSSILSQA---SFAN-Q--VVDMQDLFMRMTLDSICKVGFGVEIGTLSPSLPENPFAQAF  207 (516)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHH---HhcC-C--eEcHHHHHHHHHHHHHHHHHhCCCccccccCCCccHHHHHH
Confidence            9999999999876 66677788777653   2234 5  899999999999999999999999863111  112333333


Q ss_pred             HHHHHhhcchhhhhhccc--cccccccchHHHHHHHHHHHHHHHHHHHHHHHhhhhcC---CCCCCchHHHHHHhccccc
Q 012878          155 TKFTALTGQFVVSDALPF--LRWLDIGGYERLMSKTAKYFDIILQEWLDEHKMKRVSG---EVKGDEDFIYVLLSLLDDN  229 (454)
Q Consensus       155 ~~~~~~~~~~~~~~~~P~--l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~---~~~~~~d~l~~ll~~~~~~  229 (454)
                      ........   .....|+  +.+.......+...+..+.+.+++.+.+++++++..+.   +.....|+++.|++...+.
T Consensus       208 ~~~~~~~~---~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~  284 (516)
T PLN03195        208 DTANIIVT---LRFIDPLWKLKKFLNIGSEALLSKSIKVVDDFTYSVIRRRKAEMDEARKSGKKVKHDILSRFIELGEDP  284 (516)
T ss_pred             HHHHHHHH---HHHhcchhhHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccHHHHHHhccCCC
Confidence            33222110   1111121  11110011223445567778888888888876543111   1123568999999764432


Q ss_pred             cccCCCCCc-HHHHHHHHHHHHHccccchHHHHHHHHHHHHhChhHHHHHHHHHhHhhcC--------------------
Q 012878          230 AEQLPDRDA-DTVIKAICVTLIVAAADTTVVTLTWAIALLLNNRDVLKKAQDELDIQVGT--------------------  288 (454)
Q Consensus       230 ~~~~~~~~~-~~~i~~~~~~~~~ag~~tta~~l~~~l~~L~~~pe~q~~l~~Ei~~~~~~--------------------  288 (454)
                           +..+ +++++++++++++||+|||+++++|++++|++||++|+||++||+++.++                    
T Consensus       285 -----~~~l~~~~i~~~~~~ll~AG~dTTa~tl~~~l~~L~~~P~vq~kl~~Ei~~~~~~~~~~~~~~~~~~~~~~~~~~  359 (516)
T PLN03195        285 -----DSNFTDKSLRDIVLNFVIAGRDTTATTLSWFVYMIMMNPHVAEKLYSELKALEKERAKEEDPEDSQSFNQRVTQF  359 (516)
T ss_pred             -----CCCCCHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhhcccccccccccchhhhhcccc
Confidence                 3357 89999999999999999999999999999999999999999999987642                    


Q ss_pred             CCCCCcccccCcHHHHHHHHHHhhcCCCCcCCCcccccccccc-cceEeCCCCeEEeehhhhhcCCCCC-CCCCCCCCCC
Q 012878          289 KRQVNGSDMRNLVYLQAMIKETMRLYPALPLLLPHESIEECTV-NGYHVPAGTQLFVNAWKIQRDPCVW-EEPCQFQPER  366 (454)
Q Consensus       289 ~~~~~~~~~~~lp~l~a~i~E~lRl~~~~~~~~~R~~~~d~~~-~g~~ip~Gt~v~~~~~~~~~d~~~~-~dp~~F~P~R  366 (454)
                      ++.++++++++||||+|||+||||++|++++. +|.+.+|.++ +|+.|||||.|.++.+++||||++| |||++|+|||
T Consensus       360 ~~~~~~~~l~~Lpyl~Avi~EtLRl~p~~p~~-~r~~~~d~~~~~G~~IpkGt~V~~~~~~~h~dp~~~g~dP~~F~PeR  438 (516)
T PLN03195        360 AGLLTYDSLGKLQYLHAVITETLRLYPAVPQD-PKGILEDDVLPDGTKVKAGGMVTYVPYSMGRMEYNWGPDAASFKPER  438 (516)
T ss_pred             cCCCCHHHHhcCHHHHHHHHHHhhcCCCCcch-hhhhccCcCcCCCcEECCCCEEEEehHhhccChhhhccChhhcCCcc
Confidence            24578999999999999999999999999998 6777777665 9999999999999999999999999 9999999999


Q ss_pred             cCCCCCCcCccCCCcceecccCCCCCCCchhHHHHHHHHHHHHHhhcceeeCCCCCCCCcccccCceeccCCCeEEEEee
Q 012878          367 FLTTHKDIDVRGQNFELIPFGSGRRMCPAVSYGLQVMQLMLASLVHGFDFTTPSGEPVDMAETMGLTSAKATPLEVLVSP  446 (454)
Q Consensus       367 ~l~~~~~~~~~~~~~~~~~FG~G~r~C~G~~la~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  446 (454)
                      |++++..  ....+..|+|||+|+|.|+|++||++|++++++.|+++|++++.++.+...  ....++.|+.+++|++++
T Consensus       439 wl~~~~~--~~~~~~~~~pFG~G~R~CiG~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~--~~~~~~~~~~~~~v~~~~  514 (516)
T PLN03195        439 WIKDGVF--QNASPFKFTAFQAGPRICLGKDSAYLQMKMALALLCRFFKFQLVPGHPVKY--RMMTILSMANGLKVTVSR  514 (516)
T ss_pred             cCCCCCc--CCCCCceEeccCCCCCcCcCHHHHHHHHHHHHHHHHHhceeEecCCCccee--eeeeEEecCCCEEEEEEe
Confidence            9964310  112456799999999999999999999999999999999999876543322  223456688899999999


Q ss_pred             cC
Q 012878          447 RL  448 (454)
Q Consensus       447 r~  448 (454)
                      |.
T Consensus       515 r~  516 (516)
T PLN03195        515 RS  516 (516)
T ss_pred             CC
Confidence            84


No 24 
>PLN02774 brassinosteroid-6-oxidase
Probab=100.00  E-value=4.1e-67  Score=505.31  Aligned_cols=399  Identities=19%  Similarity=0.272  Sum_probs=315.6

Q ss_pred             CccccCCeEEEEcCCeeEEEecCHHHHHHHHHhCCcccCCCCcchhhhhhccCCeeeEeCCCChhHHHHHHHHHHhhcCh
Q 012878            1 MADKYGPIFTMKLGVKQALMVSNWEIAKECFTTNDKAFASRPKTMAMELLEYNFSVISFAPYGNYWRQSLKIATIELLSS   80 (454)
Q Consensus         1 l~~~yG~v~~i~~~~~~~vvv~dp~~~~~il~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~R~~~~~~~f~~   80 (454)
                      |+++||++|++++|++++|+++||+++++|+.++...|..+........++.  .++ ++.+|+.|+++|+++. ++|++
T Consensus        59 ~~~~yG~i~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~~~~~~~~~~lg~--~~~-~~~~g~~w~~~R~~l~-~~~~~  134 (463)
T PLN02774         59 QRLRYGSFFKSHILGCPTIVSMDPELNRYILMNEGKGLVPGYPQSMLDILGT--CNI-AAVHGSTHRYMRGSLL-SLISP  134 (463)
T ss_pred             HHHHhccCccceecCCCeEEEeCHHHHHHHHcCCCCeEEecCCHHHHHHhCc--cch-hhcCCHHHHHHHHHHH-HhcCH
Confidence            4689999999999999999999999999999887666643333233333332  233 4557999999999997 89999


Q ss_pred             HHHHH-hHHHHHHHHHHHHHHHHhccccCCCCCcceeecHHHHHHHHHHHHHHHHHhCCCCCCcchhHHHHHHHHHHHHH
Q 012878           81 HRLEK-LKHVREYEVKASIQRLYKNCVSSSSSRKVVLVDMIHWLEGTVLDVVLRIIAGKRHTSQSQEINDWQRQITKFTA  159 (454)
Q Consensus        81 ~~~~~-~~~~~~~~~~~li~~l~~~~~~~~~g~~~~~vdl~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~  159 (454)
                      ..++. +.+.+.+.+++++++|...        +  ++|+.+.+..+++++++.++||....   .....+...+..+..
T Consensus       135 ~~~~~~~~~~~~~~~~~~~~~~~~~--------~--~v~~~~~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~~~~  201 (463)
T PLN02774        135 TMIRDHLLPKIDEFMRSHLSGWDGL--------K--TIDIQEKTKEMALLSALKQIAGTLSK---PISEEFKTEFFKLVL  201 (463)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhCCC--------C--CEEeeHHHHHHHHHHHHHHHcCCCCh---HHHHHHHHHHHHHhc
Confidence            98886 7888888888888877432        3  79999999999999999999997653   212223322222211


Q ss_pred             hhcchhhhhhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCchHHHHHHhccccccccCCCCCc-
Q 012878          160 LTGQFVVSDALPFLRWLDIGGYERLMSKTAKYFDIILQEWLDEHKMKRVSGEVKGDEDFIYVLLSLLDDNAEQLPDRDA-  238 (454)
Q Consensus       160 ~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~-  238 (454)
                        ...    .+|.  +++. ...++..++.+.+.+++.+.++++++..     ....|+++.|+....+      +..+ 
T Consensus       202 --~~~----~~~~--~lp~-~~~~~~~~~~~~~~~~~~~~i~~r~~~~-----~~~~d~l~~ll~~~~~------~~~~s  261 (463)
T PLN02774        202 --GTL----SLPI--DLPG-TNYRSGVQARKNIVRMLRQLIQERRASG-----ETHTDMLGYLMRKEGN------RYKLT  261 (463)
T ss_pred             --ccc----cCCc--CCCC-hhhhHHHHHHHHHHHHHHHHHHHHHhcC-----CCcccHHHHHHhCccC------CCCCC
Confidence              110    1121  1211 1234556678888889999888876543     3356999999973221      2246 


Q ss_pred             HHHHHHHHHHHHHccccchHHHHHHHHHHHHhChhHHHHHHHHHhHhhcC---CCCCCcccccCcHHHHHHHHHHhhcCC
Q 012878          239 DTVIKAICVTLIVAAADTTVVTLTWAIALLLNNRDVLKKAQDELDIQVGT---KRQVNGSDMRNLVYLQAMIKETMRLYP  315 (454)
Q Consensus       239 ~~~i~~~~~~~~~ag~~tta~~l~~~l~~L~~~pe~q~~l~~Ei~~~~~~---~~~~~~~~~~~lp~l~a~i~E~lRl~~  315 (454)
                      ++++.+++.++++||+|||+++++|++++|++||++|+|+++|++++++.   ...++++++++||||+|||+|+||++|
T Consensus       262 ~~ei~~~~~~ll~Ag~dTt~~~l~w~l~~L~~~P~~q~kl~~Ei~~~~~~~~~~~~~~~~~l~~lpyl~a~ikE~lRl~P  341 (463)
T PLN02774        262 DEEIIDQIITILYSGYETVSTTSMMAVKYLHDHPKALQELRKEHLAIRERKRPEDPIDWNDYKSMRFTRAVIFETSRLAT  341 (463)
T ss_pred             HHHHHHHHHHHHHhcchhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHhccCCCCCCCHHHHhcCcHHHHHHHHHHhcCC
Confidence            89999999999999999999999999999999999999999999999863   346899999999999999999999999


Q ss_pred             CCcCCCcccccccccccceEeCCCCeEEeehhhhhcCCCCCCCCCCCCCCCcCCCCCCcCccCCCcceecccCCCCCCCc
Q 012878          316 ALPLLLPHESIEECTVNGYHVPAGTQLFVNAWKIQRDPCVWEEPCQFQPERFLTTHKDIDVRGQNFELIPFGSGRRMCPA  395 (454)
Q Consensus       316 ~~~~~~~R~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~~~~~~~~~~~~~~~FG~G~r~C~G  395 (454)
                      ++++. +|.+.+|++++||.||||+.|+++.+++||||++|+||++|+||||++.+.    . ....|+|||+|+|.|||
T Consensus       342 ~v~~~-~R~~~~d~~l~g~~IpkGt~v~~~~~~~~rdp~~~~dP~~F~PeRfl~~~~----~-~~~~~lpFG~G~r~C~G  415 (463)
T PLN02774        342 IVNGV-LRKTTQDMELNGYVIPKGWRIYVYTREINYDPFLYPDPMTFNPWRWLDKSL----E-SHNYFFLFGGGTRLCPG  415 (463)
T ss_pred             CCCCc-ccccCCCeeECCEEECCCCEEEEehHHhcCCcccCCChhccCchhcCCCCc----C-CCccccCcCCCCCcCCc
Confidence            99976 799999999999999999999999999999999999999999999996541    1 12369999999999999


Q ss_pred             hhHHHHHHHHHHHHHhhcceeeCCCCCCCCcccccCceeccCCCeEEEEee
Q 012878          396 VSYGLQVMQLMLASLVHGFDFTTPSGEPVDMAETMGLTSAKATPLEVLVSP  446 (454)
Q Consensus       396 ~~la~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  446 (454)
                      ++||++|++++++.|+++|++++.++.+..  ..  .++.|++++++++++
T Consensus       416 ~~~A~~e~~~~la~Ll~~f~~~~~~~~~~~--~~--~~~~p~~g~~~~~~~  462 (463)
T PLN02774        416 KELGIVEISTFLHYFVTRYRWEEVGGDKLM--KF--PRVEAPNGLHIRVSP  462 (463)
T ss_pred             HHHHHHHHHHHHHHHHHhceEEECCCCccc--cC--CCCCCCCCceEEeee
Confidence            999999999999999999999998764321  11  233467899999875


No 25 
>PLN03141 3-epi-6-deoxocathasterone 23-monooxygenase; Provisional
Probab=100.00  E-value=8.9e-67  Score=501.88  Aligned_cols=403  Identities=19%  Similarity=0.252  Sum_probs=316.8

Q ss_pred             CccccCCeEEEEcCCeeEEEecCHHHHHHHHHhCCcccCCCCcchhhhhhccCCeeeEeCCCChhHHHHHHHHHHhhcCh
Q 012878            1 MADKYGPIFTMKLGVKQALMVSNWEIAKECFTTNDKAFASRPKTMAMELLEYNFSVISFAPYGNYWRQSLKIATIELLSS   80 (454)
Q Consensus         1 l~~~yG~v~~i~~~~~~~vvv~dp~~~~~il~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~R~~~~~~~f~~   80 (454)
                      |+++||+||++++|+++.|+++||++++++|.+++..|+.+.......+++  ..++ +..+|+.|+++|+++. +.|+.
T Consensus        40 ~~~~yG~i~~~~lg~~~~vvv~~p~~~~~vl~~~~~~~~~~~~~~~~~l~g--~~~~-~~~~g~~wr~~r~~~~-~~~~~  115 (452)
T PLN03141         40 RRSLYGKVFKSHIFGTPTIVSTDAEVNKVVLQSDGNAFVPAYPKSLTELMG--KSSI-LLINGSLQRRVHGLIG-AFLKS  115 (452)
T ss_pred             HHHHhhheeeeccCCCCEEEEeCHHHhhHHHhCCCCeeeccCchhHHHHhC--cccc-cccCcHHHHHHHHHHH-HhcCc
Confidence            568999999999999999999999999999998888787654322323333  2234 4557999999999997 78887


Q ss_pred             HHHHH-hHHHHHHHHHHHHHHHHhccccCCCCCcceeecHHHHHHHHHHHHHHHHHhCCCCCCcchhHHHHHHHHHHHHH
Q 012878           81 HRLEK-LKHVREYEVKASIQRLYKNCVSSSSSRKVVLVDMIHWLEGTVLDVVLRIIAGKRHTSQSQEINDWQRQITKFTA  159 (454)
Q Consensus        81 ~~~~~-~~~~~~~~~~~li~~l~~~~~~~~~g~~~~~vdl~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~  159 (454)
                      ..++. +.+.+.+.++++++.|.       .+ .  ++|+.+.+..++++++++++||.+.+   .....+...+..+..
T Consensus       116 ~~l~~~~~~~~~~~~~~~~~~~~-------~~-~--~~~~~~~~~~~~~~vi~~~~~G~~~~---~~~~~~~~~~~~~~~  182 (452)
T PLN03141        116 PHLKAQITRDMERYVSESLDSWR-------DD-P--PVLVQDETKKIAFEVLVKALISLEPG---EEMEFLKKEFQEFIK  182 (452)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcc-------CC-C--CEEhHHHHHHHHHHHHHHHHcCCCch---HHHHHHHHHHHHHhh
Confidence            77665 35566666666665542       13 4  79999999999999999999998764   222333333333332


Q ss_pred             hhcchhhhhhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCC---CCCchHHHHHHhccccccccCCCC
Q 012878          160 LTGQFVVSDALPFLRWLDIGGYERLMSKTAKYFDIILQEWLDEHKMKRVSGEV---KGDEDFIYVLLSLLDDNAEQLPDR  236 (454)
Q Consensus       160 ~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~---~~~~d~l~~ll~~~~~~~~~~~~~  236 (454)
                      ...      .+|+  +++.. ...+..++.+.+.+++.++|+++++.......   ....|+++.+++...        .
T Consensus       183 ~~~------~~~~--~~p~~-~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~--------~  245 (452)
T PLN03141        183 GLM------SLPI--KLPGT-RLYRSLQAKKRMVKLVKKIIEEKRRAMKNKEEDETGIPKDVVDVLLRDGS--------D  245 (452)
T ss_pred             hHH------hCcc--CCCch-HhHHHHHHHHHHHHHHHHHHHHHHHHHhccCccccCChhhHHHHHHhcCC--------C
Confidence            211      1221  11111 12334567788899999999888765421110   124689999997532        2


Q ss_pred             Cc-HHHHHHHHHHHHHccccchHHHHHHHHHHHHhChhHHHHHHHHHhHhhc----CCCCCCcccccCcHHHHHHHHHHh
Q 012878          237 DA-DTVIKAICVTLIVAAADTTVVTLTWAIALLLNNRDVLKKAQDELDIQVG----TKRQVNGSDMRNLVYLQAMIKETM  311 (454)
Q Consensus       237 ~~-~~~i~~~~~~~~~ag~~tta~~l~~~l~~L~~~pe~q~~l~~Ei~~~~~----~~~~~~~~~~~~lp~l~a~i~E~l  311 (454)
                      .+ +++++++++++++||+|||+++++|++++|++||++|+++++|++++.+    .++.++.+++.+||||+|||+|++
T Consensus       246 ~l~~~~i~~~~~~ll~Ag~dTts~tl~~~~~~L~~~P~v~~kl~~Ei~~~~~~~~~~~~~~~~~~~~~lpyl~avi~E~l  325 (452)
T PLN03141        246 ELTDDLISDNMIDMMIPGEDSVPVLMTLAVKFLSDCPVALQQLTEENMKLKRLKADTGEPLYWTDYMSLPFTQNVITETL  325 (452)
T ss_pred             CCCHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhChHHHHHHHHHHHHHHhccCCCCCCCCHHHHhccHHHHHHHHHHH
Confidence            36 8999999999999999999999999999999999999999999988763    245688999999999999999999


Q ss_pred             hcCCCCcCCCcccccccccccceEeCCCCeEEeehhhhhcCCCCCCCCCCCCCCCcCCCCCCcCccCCCcceecccCCCC
Q 012878          312 RLYPALPLLLPHESIEECTVNGYHVPAGTQLFVNAWKIQRDPCVWEEPCQFQPERFLTTHKDIDVRGQNFELIPFGSGRR  391 (454)
Q Consensus       312 Rl~~~~~~~~~R~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~~~~~~~~~~~~~~~FG~G~r  391 (454)
                      |++|+++.. +|.+.+|++++||.||||+.|.++.+++||||++|+||++|+||||++.+.      .+..|+|||+|+|
T Consensus       326 Rl~p~~~~~-~R~~~~d~~l~g~~IPkG~~V~~~~~~~~~d~~~~~dP~~F~PeRfl~~~~------~~~~~~pFG~G~R  398 (452)
T PLN03141        326 RMGNIINGV-MRKAMKDVEIKGYLIPKGWCVLAYFRSVHLDEENYDNPYQFNPWRWQEKDM------NNSSFTPFGGGQR  398 (452)
T ss_pred             hccCCcCCc-ceeecCCeeECCEEECCCCEEEEehHhccCCchhcCCccccCcccccCCCC------CCCCCCCCCCCCC
Confidence            999999866 899999999999999999999999999999999999999999999997531      3568999999999


Q ss_pred             CCCchhHHHHHHHHHHHHHhhcceeeCCCCCCCCcccccCceeccCCCeEEEEeecCC
Q 012878          392 MCPAVSYGLQVMQLMLASLVHGFDFTTPSGEPVDMAETMGLTSAKATPLEVLVSPRLS  449 (454)
Q Consensus       392 ~C~G~~la~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~  449 (454)
                      .|+|++||++|++++++.|+++|++++.++...   .  ..++.|..++.|++++|.+
T Consensus       399 ~C~G~~lA~~el~~~la~ll~~f~~~~~~~~~~---~--~~~~~~~~~~~~~~~~~~~  451 (452)
T PLN03141        399 LCPGLDLARLEASIFLHHLVTRFRWVAEEDTIV---N--FPTVRMKRKLPIWVTRIDD  451 (452)
T ss_pred             CCChHHHHHHHHHHHHHHHHhcCeeecCCCCee---e--cccccCCCCceEEEEeCCC
Confidence            999999999999999999999999998765321   1  2356788899999999964


No 26 
>PLN02196 abscisic acid 8'-hydroxylase
Probab=100.00  E-value=8.3e-67  Score=502.78  Aligned_cols=395  Identities=20%  Similarity=0.295  Sum_probs=316.0

Q ss_pred             CccccCCeEEEEcCCeeEEEecCHHHHHHHHHhCCcccCCCCcchhhhhhccCCeeeEeCCCChhHHHHHHHHHHhhcCh
Q 012878            1 MADKYGPIFTMKLGVKQALMVSNWEIAKECFTTNDKAFASRPKTMAMELLEYNFSVISFAPYGNYWRQSLKIATIELLSS   80 (454)
Q Consensus         1 l~~~yG~v~~i~~~~~~~vvv~dp~~~~~il~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~R~~~~~~~f~~   80 (454)
                      |+++||++|+++++++++|+++||+++++++.++.+.|... ........ .+..++ +..+|+.|+++||++. +.|++
T Consensus        64 ~~~~yG~i~~~~~~~~~~v~v~~p~~~~~vl~~~~~~~~~~-~~~~~~~~-~g~~~l-~~~~g~~w~~~Rk~l~-~~f~~  139 (463)
T PLN02196         64 KQKRYGSVFKTHVLGCPCVMISSPEAAKFVLVTKSHLFKPT-FPASKERM-LGKQAI-FFHQGDYHAKLRKLVL-RAFMP  139 (463)
T ss_pred             HHHHhhhhheeeecCCceEEEcCHHHHHHHHhCCCCccccc-CchHHHHH-cCcccc-cccCcHHHHHHHHHHH-HhcCh
Confidence            57899999999999999999999999999998876666321 11111211 222233 4567999999999998 89999


Q ss_pred             HHHHHhHHHHHHHHHHHHHHHHhccccCCCCCcceeecHHHHHHHHHHHHHHHHHhCCCCCCcchhHHHHHHHHHHHHHh
Q 012878           81 HRLEKLKHVREYEVKASIQRLYKNCVSSSSSRKVVLVDMIHWLEGTVLDVVLRIIAGKRHTSQSQEINDWQRQITKFTAL  160 (454)
Q Consensus        81 ~~~~~~~~~~~~~~~~li~~l~~~~~~~~~g~~~~~vdl~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~  160 (454)
                      ++++.+.+.+.+.+.++++.|..         +  ++|+.++++.+++++++.++||.+...   ....+......+...
T Consensus       140 ~~l~~~~~~i~~~~~~~~~~~~~---------~--~v~~~~~~~~~~~~v~~~~~fG~~~~~---~~~~~~~~~~~~~~~  205 (463)
T PLN02196        140 DAIRNMVPDIESIAQESLNSWEG---------T--QINTYQEMKTYTFNVALLSIFGKDEVL---YREDLKRCYYILEKG  205 (463)
T ss_pred             HHHHHHHHHHHHHHHHHHHcCCC---------C--eEEeHHHHHHHHHHHHHHHHcCCCCch---HHHHHHHHHHHHhcc
Confidence            99999999999999999887632         3  789999999999999999999987631   111222222111111


Q ss_pred             hcchhhhhhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCchHHHHHHhccccccccCCCCCc-H
Q 012878          161 TGQFVVSDALPFLRWLDIGGYERLMSKTAKYFDIILQEWLDEHKMKRVSGEVKGDEDFIYVLLSLLDDNAEQLPDRDA-D  239 (454)
Q Consensus       161 ~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~-~  239 (454)
                            ...+|+.  ++ ....++..++.+.+.+++.+.++++++..     ....|+++.+++.         +..+ +
T Consensus       206 ------~~~~~~~--~p-~~~~~~~~~a~~~~~~~~~~~i~~~~~~~-----~~~~d~l~~ll~~---------~~~l~~  262 (463)
T PLN02196        206 ------YNSMPIN--LP-GTLFHKSMKARKELAQILAKILSKRRQNG-----SSHNDLLGSFMGD---------KEGLTD  262 (463)
T ss_pred             ------hhccccc--CC-CccchHHHHHHHHHHHHHHHHHHHHhhcC-----CCcccHHHHHHhc---------CCCCCH
Confidence                  1112321  11 11134556777888888888888776543     3456899998852         2246 8


Q ss_pred             HHHHHHHHHHHHccccchHHHHHHHHHHHHhChhHHHHHHHHHhHhhcC---CCCCCcccccCcHHHHHHHHHHhhcCCC
Q 012878          240 TVIKAICVTLIVAAADTTVVTLTWAIALLLNNRDVLKKAQDELDIQVGT---KRQVNGSDMRNLVYLQAMIKETMRLYPA  316 (454)
Q Consensus       240 ~~i~~~~~~~~~ag~~tta~~l~~~l~~L~~~pe~q~~l~~Ei~~~~~~---~~~~~~~~~~~lp~l~a~i~E~lRl~~~  316 (454)
                      +++.++++++++||+|||+++++|++++|++||++|+|+++|++++.+.   .+.++.+++++||||+|||+|+||++|+
T Consensus       263 ~ei~~~~~~~~~Ag~dTta~~l~~~l~~L~~~P~vq~kl~~Ei~~~~~~~~~~~~~~~~~~~~l~yl~avi~EtlRl~p~  342 (463)
T PLN02196        263 EQIADNIIGVIFAARDTTASVLTWILKYLAENPSVLEAVTEEQMAIRKDKEEGESLTWEDTKKMPLTSRVIQETLRVASI  342 (463)
T ss_pred             HHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhcccccCCCCCHHHHhcChHHHHHHHHHHhcCCC
Confidence            9999999999999999999999999999999999999999999998863   3568999999999999999999999999


Q ss_pred             CcCCCcccccccccccceEeCCCCeEEeehhhhhcCCCCCCCCCCCCCCCcCCCCCCcCccCCCcceecccCCCCCCCch
Q 012878          317 LPLLLPHESIEECTVNGYHVPAGTQLFVNAWKIQRDPCVWEEPCQFQPERFLTTHKDIDVRGQNFELIPFGSGRRMCPAV  396 (454)
Q Consensus       317 ~~~~~~R~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~~~~~~~~~~~~~~~FG~G~r~C~G~  396 (454)
                      +++. .|.+.+|++++||.|||||.|+++.+++||||++|+||++|+||||+...       .+..++|||.|+|.|+|+
T Consensus       343 ~~~~-~R~~~~d~~i~g~~IpkGt~v~~~~~~~~rd~~~~~dP~~F~PeRfl~~~-------~~~~~lpFG~G~r~C~G~  414 (463)
T PLN02196        343 LSFT-FREAVEDVEYEGYLIPKGWKVLPLFRNIHHSADIFSDPGKFDPSRFEVAP-------KPNTFMPFGNGTHSCPGN  414 (463)
T ss_pred             cccc-ceeeccccccCCEEeCCCCEEEeeHHHhcCCchhcCCcCccChhhhcCCC-------CCCcccCcCCCCCCCchH
Confidence            9998 69999999999999999999999999999999999999999999999643       357899999999999999


Q ss_pred             hHHHHHHHHHHHHHhhcceeeCCCCCCCCcccccCceeccCCCeEEEEeec
Q 012878          397 SYGLQVMQLMLASLVHGFDFTTPSGEPVDMAETMGLTSAKATPLEVLVSPR  447 (454)
Q Consensus       397 ~la~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r  447 (454)
                      ++|++|++++++.|+++|++++.+++ .++..  ..+..|+.+++|+++.+
T Consensus       415 ~~A~~e~~~~la~ll~~f~~~~~~~~-~~~~~--~~~~~p~~~~~~~~~~~  462 (463)
T PLN02196        415 ELAKLEISVLIHHLTTKYRWSIVGTS-NGIQY--GPFALPQNGLPIALSRK  462 (463)
T ss_pred             HHHHHHHHHHHHHHHHhcEEEEcCCC-CceEE--cccccCCCCceEEEecC
Confidence            99999999999999999999987643 33332  33445888999998764


No 27 
>PLN02426 cytochrome P450, family 94, subfamily C protein
Probab=100.00  E-value=5.1e-66  Score=499.31  Aligned_cols=417  Identities=20%  Similarity=0.284  Sum_probs=320.5

Q ss_pred             cccC-CeEEEEcCCeeEEEecCHHHHHHHHHhCCcccCCCCcch-hh-hhhccCCeeeEeCCCChhHHHHHHHHHHhhcC
Q 012878            3 DKYG-PIFTMKLGVKQALMVSNWEIAKECFTTNDKAFASRPKTM-AM-ELLEYNFSVISFAPYGNYWRQSLKIATIELLS   79 (454)
Q Consensus         3 ~~yG-~v~~i~~~~~~~vvv~dp~~~~~il~~~~~~f~~~~~~~-~~-~~~~~~~~~~~~~~~~~~w~~~R~~~~~~~f~   79 (454)
                      ++++ .+++++..+.  |+++||+.+++|+..+.+.|.+...+. .. ..+   +.++ ++.+|+.|+++||++. +.|+
T Consensus        71 ~~~~~~~~~~~~~~~--iv~~dpe~i~~vl~~~~~~~~k~~~~~~~~~~~~---g~gi-~~~~g~~wk~~Rk~l~-~~fs  143 (502)
T PLN02426         71 RRSPTGTIHVHVLGN--TITANPENVEYMLKTRFDNYPKGKPFSAILGDLL---GRGI-FNVDGDSWRFQRKMAS-LELG  143 (502)
T ss_pred             HhCCCcEEEEecCCc--EEecCHHHHHHHHhhChhcCCCcHhHHHHHHHhc---CCce-eecCcHHHHHHHHHhH-hhhh
Confidence            4555 4788776554  899999999999988766776544332 11 222   2344 5567999999999997 8999


Q ss_pred             hHHHHHhH--HHHHHHHHHHHHHHHhccccCCCCCcceeecHHHHHHHHHHHHHHHHHhCCCCCCcc--hhHHHHHHHHH
Q 012878           80 SHRLEKLK--HVREYEVKASIQRLYKNCVSSSSSRKVVLVDMIHWLEGTVLDVVLRIIAGKRHTSQS--QEINDWQRQIT  155 (454)
Q Consensus        80 ~~~~~~~~--~~~~~~~~~li~~l~~~~~~~~~g~~~~~vdl~~~~~~~~~~vi~~~~fG~~~~~~~--~~~~~~~~~~~  155 (454)
                      ...++.+.  +.+.+.++.+++.+.+.. +...+ .  ++|+.++++++++|+++.++||.+++..+  ....++...+.
T Consensus       144 ~~~l~~~~~~~~~~~~~~~l~~~l~~~~-~~~~~-~--~vd~~~~~~~~t~dvi~~~~fG~~~~~l~~~~~~~~~~~~~~  219 (502)
T PLN02426        144 SVSIRSYAFEIVASEIESRLLPLLSSAA-DDGEG-A--VLDLQDVFRRFSFDNICKFSFGLDPGCLELSLPISEFADAFD  219 (502)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHh-hcCCC-c--eEcHHHHHHHHHHHHHHHHHhCCCCcccCCCCCccHHHHHHH
Confidence            99888864  677787888888887641 01123 4  79999999999999999999999986321  12234544444


Q ss_pred             HHHHhhcchhhhhhccccccc---cccchHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCchHHHHHHhcccccccc
Q 012878          156 KFTALTGQFVVSDALPFLRWL---DIGGYERLMSKTAKYFDIILQEWLDEHKMKRVSGEVKGDEDFIYVLLSLLDDNAEQ  232 (454)
Q Consensus       156 ~~~~~~~~~~~~~~~P~l~~~---~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~  232 (454)
                      ........ .....+|+++++   ...+..++..++.+.+.+++.++|+++++.. .   ....|+++.|++...+    
T Consensus       220 ~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~I~~r~~~~-~---~~~~dll~~ll~~~~~----  290 (502)
T PLN02426        220 TASKLSAE-RAMAASPLLWKIKRLLNIGSERKLKEAIKLVDELAAEVIRQRRKLG-F---SASKDLLSRFMASIND----  290 (502)
T ss_pred             HHHHHHHH-HHhcchhHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHHHhcc-c---CCcchHHHHHHhcCCC----
Confidence            43322111 111122332211   1112345667788889999999998887542 1   2356999999975321    


Q ss_pred             CCCCCcHHHHHHHHHHHHHccccchHHHHHHHHHHHHhChhHHHHHHHHHhHhhcCC-CCCCcccccCcHHHHHHHHHHh
Q 012878          233 LPDRDADTVIKAICVTLIVAAADTTVVTLTWAIALLLNNRDVLKKAQDELDIQVGTK-RQVNGSDMRNLVYLQAMIKETM  311 (454)
Q Consensus       233 ~~~~~~~~~i~~~~~~~~~ag~~tta~~l~~~l~~L~~~pe~q~~l~~Ei~~~~~~~-~~~~~~~~~~lp~l~a~i~E~l  311 (454)
                            ++++.+++.++++||+|||+++++|++|+|++||++|+|+++||+++.+++ ..++++++++||||+|||+|+|
T Consensus       291 ------~~~l~~~~~~~l~AG~dTta~~l~~~l~~L~~~P~v~~kl~~Ei~~~~~~~~~~~t~~~l~~LpYl~avi~EtL  364 (502)
T PLN02426        291 ------DKYLRDIVVSFLLAGRDTVASALTSFFWLLSKHPEVASAIREEADRVMGPNQEAASFEEMKEMHYLHAALYESM  364 (502)
T ss_pred             ------HHHHHHHHHHHHHhccchHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhCCCCCCCCHHHHhcChHHHHHHHHHH
Confidence                  578999999999999999999999999999999999999999999998753 3689999999999999999999


Q ss_pred             hcCCCCcCCCcccccccccc-cceEeCCCCeEEeehhhhhcCCCCC-CCCCCCCCCCcCCCCCCcCccCCCcceecccCC
Q 012878          312 RLYPALPLLLPHESIEECTV-NGYHVPAGTQLFVNAWKIQRDPCVW-EEPCQFQPERFLTTHKDIDVRGQNFELIPFGSG  389 (454)
Q Consensus       312 Rl~~~~~~~~~R~~~~d~~~-~g~~ip~Gt~v~~~~~~~~~d~~~~-~dp~~F~P~R~l~~~~~~~~~~~~~~~~~FG~G  389 (454)
                      |++|+++.. .|.+.+|.++ +|+.|||||.|.++.+++||||++| |||++|+||||++++. . ....+..++|||+|
T Consensus       365 Rl~p~v~~~-~r~~~~d~~~~~G~~Ip~Gt~V~~~~~~~~rd~~~~G~dp~~F~PeRwl~~~~-~-~~~~~~~~~pFg~G  441 (502)
T PLN02426        365 RLFPPVQFD-SKFAAEDDVLPDGTFVAKGTRVTYHPYAMGRMERIWGPDCLEFKPERWLKNGV-F-VPENPFKYPVFQAG  441 (502)
T ss_pred             hCCCCCCCc-ceeeccCCCcCCCcEECCCCEEEEchHHhcCCccccCcChhhcCccccCCCCC-c-CCCCCcccCCCCCC
Confidence            999999998 6999999887 9999999999999999999999999 9999999999997431 0 11245679999999


Q ss_pred             CCCCCchhHHHHHHHHHHHHHhhcceeeCCCCCCCCcccccCceeccCCCeEEEEeecC
Q 012878          390 RRMCPAVSYGLQVMQLMLASLVHGFDFTTPSGEPVDMAETMGLTSAKATPLEVLVSPRL  448 (454)
Q Consensus       390 ~r~C~G~~la~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~  448 (454)
                      +|.|+|+++|++|++++++.|+++|++++.++.........++++.++++++|++++|.
T Consensus       442 ~R~CiG~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~gl~v~~~~r~  500 (502)
T PLN02426        442 LRVCLGKEMALMEMKSVAVAVVRRFDIEVVGRSNRAPRFAPGLTATVRGGLPVRVRERV  500 (502)
T ss_pred             CCCCccHHHHHHHHHHHHHHHHHHceEEEecCCCCCCcccceeEEecCCCEEEEEEEcc
Confidence            99999999999999999999999999998654221222233567788899999999985


No 28 
>PLN02302 ent-kaurenoic acid oxidase
Probab=100.00  E-value=2.7e-65  Score=498.77  Aligned_cols=407  Identities=19%  Similarity=0.292  Sum_probs=320.4

Q ss_pred             CccccCC--eEEEEcCCeeEEEecCHHHHHHHHHhCCcccCCCCcchhhhhhccCCeeeEeCCCChhHHHHHHHHHHhhc
Q 012878            1 MADKYGP--IFTMKLGVKQALMVSNWEIAKECFTTNDKAFASRPKTMAMELLEYNFSVISFAPYGNYWRQSLKIATIELL   78 (454)
Q Consensus         1 l~~~yG~--v~~i~~~~~~~vvv~dp~~~~~il~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~R~~~~~~~f   78 (454)
                      |+++||+  +|++++++++.|+++||+++++|+.++ +.|.++........++  . ..++..+|+.|+++|+++. +.|
T Consensus        75 ~~~kyG~~~i~~~~~~~~~~vvv~~pe~~~~vl~~~-~~f~~~~~~~~~~~~g--~-~~~~~~~g~~w~~~R~~~~-~~f  149 (490)
T PLN02302         75 FISRYGRTGIYKAFMFGQPTVLVTTPEACKRVLTDD-DAFEPGWPESTVELIG--R-KSFVGITGEEHKRLRRLTA-APV  149 (490)
T ss_pred             HHHHhCCCcceeeecCCCCeEEEcCHHHHHHHHcCC-CccccCCchhHHHHhc--c-ccccccCcHHHHHHHHHHH-hcc
Confidence            5789997  799999999999999999999999876 5565443322223222  2 2234457999999999998 778


Q ss_pred             -ChHHHHHhHHHHHHHHHHHHHHHHhccccCCCCCcceeecHHHHHHHHHHHHHHHHHhCCCCCCcchhHHHHHHHHHHH
Q 012878           79 -SSHRLEKLKHVREYEVKASIQRLYKNCVSSSSSRKVVLVDMIHWLEGTVLDVVLRIIAGKRHTSQSQEINDWQRQITKF  157 (454)
Q Consensus        79 -~~~~~~~~~~~~~~~~~~li~~l~~~~~~~~~g~~~~~vdl~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~  157 (454)
                       +++.++.+.+.+.+.++++++.|...      +    .+|+.++++.++++++++++||.+++   .....+...+..+
T Consensus       150 ~~~~~l~~~~~~i~~~v~~~~~~~~~~------~----~v~~~~~~~~~~~~vi~~~~~G~~~~---~~~~~~~~~~~~~  216 (490)
T PLN02302        150 NGPEALSTYIPYIEENVKSCLEKWSKM------G----EIEFLTELRKLTFKIIMYIFLSSESE---LVMEALEREYTTL  216 (490)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHhcCC------C----CEehHHHHHHHHHHHHHHHHcCCCCh---HHHHHHHHHHHHH
Confidence             57889999999999999999988542      4    79999999999999999999998874   1122222222222


Q ss_pred             HHhhcchhhhhhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCchHHHHHHhccccccccCCCCC
Q 012878          158 TALTGQFVVSDALPFLRWLDIGGYERLMSKTAKYFDIILQEWLDEHKMKRVSGEVKGDEDFIYVLLSLLDDNAEQLPDRD  237 (454)
Q Consensus       158 ~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~  237 (454)
                      ...+..  +...+|..       ......++.+.+.+++.+.++++++...........|+++.|++..+++     +..
T Consensus       217 ~~~~~~--~~~~~p~~-------~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~d~l~~ll~~~~~~-----~~~  282 (490)
T PLN02302        217 NYGVRA--MAINLPGF-------AYHRALKARKKLVALFQSIVDERRNSRKQNISPRKKDMLDLLLDAEDEN-----GRK  282 (490)
T ss_pred             HHHhhh--CCcCCCch-------hhHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCcCCHHHHHHhhhccC-----CCC
Confidence            111110  00011211       1233445667788888888888765442111124579999999875443     345


Q ss_pred             c-HHHHHHHHHHHHHccccchHHHHHHHHHHHHhChhHHHHHHHHHhHhhcCC----CCCCcccccCcHHHHHHHHHHhh
Q 012878          238 A-DTVIKAICVTLIVAAADTTVVTLTWAIALLLNNRDVLKKAQDELDIQVGTK----RQVNGSDMRNLVYLQAMIKETMR  312 (454)
Q Consensus       238 ~-~~~i~~~~~~~~~ag~~tta~~l~~~l~~L~~~pe~q~~l~~Ei~~~~~~~----~~~~~~~~~~lp~l~a~i~E~lR  312 (454)
                      + +++++++++.+++||+|||+++++|++++|++||++|+|+++|++++++..    ..++++++++||||+|||+|+||
T Consensus       283 ~~~~~i~~~~~~~~~Ag~dtta~~l~~~l~~L~~~P~~~~kl~~E~~~v~~~~~~~~~~~~~~~l~~lpyl~a~i~E~lR  362 (490)
T PLN02302        283 LDDEEIIDLLLMYLNAGHESSGHLTMWATIFLQEHPEVLQKAKAEQEEIAKKRPPGQKGLTLKDVRKMEYLSQVIDETLR  362 (490)
T ss_pred             CCHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHhcChHHHHHHHHHHH
Confidence            7 899999999999999999999999999999999999999999999998642    23789999999999999999999


Q ss_pred             cCCCCcCCCcccccccccccceEeCCCCeEEeehhhhhcCCCCCCCCCCCCCCCcCCCCCCcCccCCCcceecccCCCCC
Q 012878          313 LYPALPLLLPHESIEECTVNGYHVPAGTQLFVNAWKIQRDPCVWEEPCQFQPERFLTTHKDIDVRGQNFELIPFGSGRRM  392 (454)
Q Consensus       313 l~~~~~~~~~R~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~~~~~~~~~~~~~~~FG~G~r~  392 (454)
                      ++|++++. +|.+.+|++++||.||||+.|.++.+++||||++|+||++|+||||++..      ..+..++|||.|+|.
T Consensus       363 l~p~~~~~-~R~~~~d~~~~g~~Ip~Gt~v~~~~~~~~rd~~~~~dP~~F~PeR~~~~~------~~~~~~~pFG~G~r~  435 (490)
T PLN02302        363 LINISLTV-FREAKTDVEVNGYTIPKGWKVLAWFRQVHMDPEVYPNPKEFDPSRWDNYT------PKAGTFLPFGLGSRL  435 (490)
T ss_pred             hCCCcccc-hhcccCCEeECCEEECCCCEEEeeHHHhcCCcccCCCccccChhhcCCCC------CCCCCccCCCCCCcC
Confidence            99999997 79999999999999999999999999999999999999999999999653      245689999999999


Q ss_pred             CCchhHHHHHHHHHHHHHhhcceeeCCCCCCCCcccccCceeccCCCeEEEEeecCC
Q 012878          393 CPAVSYGLQVMQLMLASLVHGFDFTTPSGEPVDMAETMGLTSAKATPLEVLVSPRLS  449 (454)
Q Consensus       393 C~G~~la~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~  449 (454)
                      |+|++||.+|++++++.|+++|++++.++. .++.  ......|..++.+++++|.+
T Consensus       436 C~G~~lA~~e~~~~la~ll~~f~~~~~~~~-~~~~--~~~~~~p~~~~~~~~~~~~~  489 (490)
T PLN02302        436 CPGNDLAKLEISIFLHHFLLGYRLERLNPG-CKVM--YLPHPRPKDNCLARITKVAS  489 (490)
T ss_pred             CCcHHHHHHHHHHHHHHHHhcCeeEEcCCC-Ccce--eCCCCCCCCCceEEEEeccC
Confidence            999999999999999999999999987642 2222  22235678899999999975


No 29 
>PLN02987 Cytochrome P450, family 90, subfamily A
Probab=100.00  E-value=1.6e-64  Score=485.10  Aligned_cols=403  Identities=17%  Similarity=0.226  Sum_probs=311.6

Q ss_pred             CccccCCeEEEEcCCeeEEEecCHHHHHHHHHhCCcccCCCCcchhhhhhccCCeeeEeCCCChhHHHHHHHHHHhhcCh
Q 012878            1 MADKYGPIFTMKLGVKQALMVSNWEIAKECFTTNDKAFASRPKTMAMELLEYNFSVISFAPYGNYWRQSLKIATIELLSS   80 (454)
Q Consensus         1 l~~~yG~v~~i~~~~~~~vvv~dp~~~~~il~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~R~~~~~~~f~~   80 (454)
                      |+++|||+|++++++++.|+|+||+++++++.++...|.+++.......++  +.++++ .+|+.|+++|+++. +.++.
T Consensus        63 ~~~~yG~v~~~~l~~~~~vvv~~pe~~~~il~~~~~~f~~~~~~~~~~~lg--~~~l~~-~~g~~wr~~R~~~~-~f~~~  138 (472)
T PLN02987         63 RVARYGSLFMTHLFGEPTVFSADPETNRFILQNEGKLFECSYPGSISNLLG--KHSLLL-MKGNLHKKMHSLTM-SFANS  138 (472)
T ss_pred             HHHHhchhhhhhhcCCCeEEEeCHHHHHHHHhCCCceEEecCcHHHHHHhC--cccccc-cCcHHHHHHHHHHH-HhcCh
Confidence            467999999999999999999999999999998877786654333334443  234544 47999999999986 55455


Q ss_pred             HHHHHhHHHHHHHHHHHHHHHHhccccCCCCCcceeecHHHHHHHHHHHHHHHHHhCCCCCCcchhHHHHHHHHHHHHHh
Q 012878           81 HRLEKLKHVREYEVKASIQRLYKNCVSSSSSRKVVLVDMIHWLEGTVLDVVLRIIAGKRHTSQSQEINDWQRQITKFTAL  160 (454)
Q Consensus        81 ~~~~~~~~~~~~~~~~li~~l~~~~~~~~~g~~~~~vdl~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~  160 (454)
                      +.++.+.   ..++.++++.....   .  + +  ++++.+.+.+++++++++++||.+.+.   ....+...+......
T Consensus       139 ~~~~~~~---~~~~~~~~~~~~~~---~--~-~--~v~~~~~~~~~t~~vi~~~~fg~~~~~---~~~~~~~~~~~~~~~  204 (472)
T PLN02987        139 SIIKDHL---LLDIDRLIRFNLDS---W--S-S--RVLLMEEAKKITFELTVKQLMSFDPGE---WTESLRKEYVLVIEG  204 (472)
T ss_pred             HHHHHHH---HHHHHHHHHHHHHh---h--c-c--ceehHHHHHHHHHHHHHHHHcCCCChH---HHHHHHHHHHHHHhh
Confidence            5555433   22233333332221   0  1 3  789999999999999999999987641   111222222222211


Q ss_pred             hcchhhhhhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCchHHHHHHhccccccccCCCCCc-H
Q 012878          161 TGQFVVSDALPFLRWLDIGGYERLMSKTAKYFDIILQEWLDEHKMKRVSGEVKGDEDFIYVLLSLLDDNAEQLPDRDA-D  239 (454)
Q Consensus       161 ~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~-~  239 (454)
                      .    ....+|++.     ...++..+..+.+.+++.++++++++.. ..+.....|+++.|++...         .+ +
T Consensus       205 ~----~~~~~p~l~-----~~~~~~~~~~~~~~~~~~~~i~~r~~~~-~~~~~~~~d~l~~ll~~~~---------~~~~  265 (472)
T PLN02987        205 F----FSVPLPLFS-----TTYRRAIQARTKVAEALTLVVMKRRKEE-EEGAEKKKDMLAALLASDD---------GFSD  265 (472)
T ss_pred             h----hcCCCcCCC-----chHHHHHHHHHHHHHHHHHHHHHHHhhh-hccCcccccHHHHHHhcCC---------CCCH
Confidence            1    112234431     2245667788899999999999887654 2211235699999997521         36 8


Q ss_pred             HHHHHHHHHHHHccccchHHHHHHHHHHHHhChhHHHHHHHHHhHhhcC---CCCCCcccccCcHHHHHHHHHHhhcCCC
Q 012878          240 TVIKAICVTLIVAAADTTVVTLTWAIALLLNNRDVLKKAQDELDIQVGT---KRQVNGSDMRNLVYLQAMIKETMRLYPA  316 (454)
Q Consensus       240 ~~i~~~~~~~~~ag~~tta~~l~~~l~~L~~~pe~q~~l~~Ei~~~~~~---~~~~~~~~~~~lp~l~a~i~E~lRl~~~  316 (454)
                      ++++++++++++||+|||+++++|++++|++||++|+++++|++++.+.   +..++.+++.+|||++||++|+||++|+
T Consensus       266 ~ei~~~~~~l~~Ag~~tta~~l~~~l~~L~~~P~~~~~l~~E~~~~~~~~~~~~~~~~~~l~~lpyl~a~i~EtLRl~p~  345 (472)
T PLN02987        266 EEIVDFLVALLVAGYETTSTIMTLAVKFLTETPLALAQLKEEHEKIRAMKSDSYSLEWSDYKSMPFTQCVVNETLRVANI  345 (472)
T ss_pred             HHHHHHHHHHHHhccchHHHHHHHHHHHHHhChHHHHHHHHHHHHHHcccCCCCCCCHHHHhcChHHHHHHHHHHHccCC
Confidence            9999999999999999999999999999999999999999999998752   3457889999999999999999999999


Q ss_pred             CcCCCcccccccccccceEeCCCCeEEeehhhhhcCCCCCCCCCCCCCCCcCCCCCCcCccCCCcceecccCCCCCCCch
Q 012878          317 LPLLLPHESIEECTVNGYHVPAGTQLFVNAWKIQRDPCVWEEPCQFQPERFLTTHKDIDVRGQNFELIPFGSGRRMCPAV  396 (454)
Q Consensus       317 ~~~~~~R~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~~~~~~~~~~~~~~~FG~G~r~C~G~  396 (454)
                      ++.. +|.+.+|++++||.|||||.|+++.+.+|+||++|+||++|+||||++....   ......++|||.|+|.|+|+
T Consensus       346 ~~~~-~R~~~~d~~~~G~~ip~Gt~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~---~~~~~~~l~FG~G~r~C~G~  421 (472)
T PLN02987        346 IGGI-FRRAMTDIEVKGYTIPKGWKVFASFRAVHLDHEYFKDARTFNPWRWQSNSGT---TVPSNVFTPFGGGPRLCPGY  421 (472)
T ss_pred             cCCc-cccCCCCeeECCEEECCCCEEEEehHHhhCCcccCCCccccCcccCCCCCCC---CCCCcceECCCCCCcCCCcH
Confidence            9876 7999999999999999999999999999999999999999999999975421   11346799999999999999


Q ss_pred             hHHHHHHHHHHHHHhhcceeeCCCCCCCCcccccCceeccCCCeEEEEeecC
Q 012878          397 SYGLQVMQLMLASLVHGFDFTTPSGEPVDMAETMGLTSAKATPLEVLVSPRL  448 (454)
Q Consensus       397 ~la~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~  448 (454)
                      +||++|++++++.|+++|++++.++..+..    ..++.|.+++++++++|.
T Consensus       422 ~lA~~e~~~~la~ll~~f~~~~~~~~~~~~----~~~~~p~~~~~~~~~~r~  469 (472)
T PLN02987        422 ELARVALSVFLHRLVTRFSWVPAEQDKLVF----FPTTRTQKRYPINVKRRD  469 (472)
T ss_pred             HHHHHHHHHHHHHHHhceEEEECCCCceee----cccccCCCCceEEEEecc
Confidence            999999999999999999999876543222    346678889999999984


No 30 
>KOG0684 consensus Cytochrome P450 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=3.9e-60  Score=418.95  Aligned_cols=414  Identities=20%  Similarity=0.309  Sum_probs=321.6

Q ss_pred             ccccCCeEEEEcCCeeEEEecCHHHHHHHHHhCCcccCCCCcchh--hhhhccCCeeeEeCCCChhHHHHHHHHHHhhcC
Q 012878            2 ADKYGPIFTMKLGVKQALMVSNWEIAKECFTTNDKAFASRPKTMA--MELLEYNFSVISFAPYGNYWRQSLKIATIELLS   79 (454)
Q Consensus         2 ~~~yG~v~~i~~~~~~~vvv~dp~~~~~il~~~~~~f~~~~~~~~--~~~~~~~~~~~~~~~~~~~w~~~R~~~~~~~f~   79 (454)
                      .+|||+||++.++|+.+.++.+|+....++.+....++....+..  ...++   ++++....+....++.+.+. .++.
T Consensus        61 ~~K~GdVFTv~l~Gk~~Tfll~p~~~~~v~~~~~~~ld~~~~~~~l~~~vFg---~~v~~d~~~~~~~e~~~~~k-~~L~  136 (486)
T KOG0684|consen   61 RKKYGDVFTVLLMGKYMTFLLGPEGYDFVFKAKLADLDFEEAYSKLTTPVFG---KGVVYDVPNHVMMEQKKFFK-SALG  136 (486)
T ss_pred             HHhcCCeEEEEEcCcEEEEEeCchhhHHHHcCcccccCHHHHHHHhhhhhcC---CCccccCCCchHHHHHHHHH-HHhc
Confidence            479999999999999999999999999999876444432222211  12222   34556566777788888887 7899


Q ss_pred             hHHHHHhHHHHHHHHHHHHHH-HHhccccCCCCCcceeecHHHHHHHHHHHHHHHHHhCCCCCCcchhHHHHHHHHHHHH
Q 012878           80 SHRLEKLKHVREYEVKASIQR-LYKNCVSSSSSRKVVLVDMIHWLEGTVLDVVLRIIAGKRHTSQSQEINDWQRQITKFT  158 (454)
Q Consensus        80 ~~~~~~~~~~~~~~~~~li~~-l~~~~~~~~~g~~~~~vdl~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~  158 (454)
                      ..+++.+.+.|.+++++.+.. |.+      +| .  .-.+..+...+.+.+.-.++||+.....++   ++...+.++.
T Consensus       137 ~~~lk~~~e~m~~el~~~f~~~~~~------s~-~--~d~l~~~~~~ii~tAs~~ll~~e~r~~~d~---~~a~l~~dLd  204 (486)
T KOG0684|consen  137 GVALKSLVELMLEELHAYFETSLGE------SG-E--TDGLYTFCRLIIFTASRLLLGGEVRDQLDA---DVAKLYHDLD  204 (486)
T ss_pred             hhhHHHHHHHHHHHHHHHHhccccc------cc-c--hhHhhhhhHHHhhhhHHHhhhhhhhhhhcc---hHHHHHHHHh
Confidence            999999999999999888876 332      34 2  334555555555555555555554432122   3334444444


Q ss_pred             HhhcchhhhhhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCchHHHHHHhccccccccCCCCCc
Q 012878          159 ALTGQFVVSDALPFLRWLDIGGYERLMSKTAKYFDIILQEWLDEHKMKRVSGEVKGDEDFIYVLLSLLDDNAEQLPDRDA  238 (454)
Q Consensus       159 ~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~  238 (454)
                      .....  +...||.  ++|.. ..+...++.+.+.+.....+.++++.. +   ..+.|+++.+++.+.+      +.+.
T Consensus       205 ~~F~~--~d~~FP~--~LP~~-~~r~~~ra~~~i~k~f~~~i~~rr~s~-s---~~~~dmlq~l~~~y~d------g~~~  269 (486)
T KOG0684|consen  205 QGFQP--FDFLFPY--NLPIP-LLRRRDRARKKISKIFSKIILDRRASI-S---KWDNDMLQSLMEKYKD------GRPT  269 (486)
T ss_pred             ccccc--hHhhccc--CCCcc-hhhhHHHHHHHHHHHHHHHHHHHHhcc-c---cccHHHHHHHHHHhhc------CCcC
Confidence            43332  3344664  34322 235555889999999999999988766 1   3466899999984333      5567


Q ss_pred             -HHHHHHHHHHHHHccccchHHHHHHHHHHHHhChhHHHHHHHHHhHhhcCCC-CCCcccccCcHHHHHHHHHHhhcCCC
Q 012878          239 -DTVIKAICVTLIVAAADTTVVTLTWAIALLLNNRDVLKKAQDELDIQVGTKR-QVNGSDMRNLVYLQAMIKETMRLYPA  316 (454)
Q Consensus       239 -~~~i~~~~~~~~~ag~~tta~~l~~~l~~L~~~pe~q~~l~~Ei~~~~~~~~-~~~~~~~~~lp~l~a~i~E~lRl~~~  316 (454)
                       ++++...++.+++||+.||+.+.+|++++|++|||+++.+++|+.+++|+.. .++.+.+++||+|+.||+|||||+||
T Consensus       270 te~e~a~~li~~LwA~Q~ns~ptsfW~l~yLl~~Pe~~~a~~eE~k~vlG~~~~~l~~d~L~~lplL~~~IkEtLRL~~p  349 (486)
T KOG0684|consen  270 TEEEIAGLLIGLLWAGQHNSSPTSFWTLAYLLRHPEAQKAVREEQKRVLGEKKEKLTYDQLKDLPLLDSCIKETLRLHPP  349 (486)
T ss_pred             cHHHHHHHHHHHHHhccccccHHHHHHHHHHhhCHHHHHHHHHHHHHHhhccCCCCCHHHHhcchHHHHHHHHHHhcCCc
Confidence             9999999999999999999999999999999999999999999999998744 49999999999999999999999999


Q ss_pred             CcCCCcccccccccccc----eEeCCCCeEEeehhhhhcCCCCCCCCCCCCCCCcCCCCCCcC--ccCCCcceecccCCC
Q 012878          317 LPLLLPHESIEECTVNG----YHVPAGTQLFVNAWKIQRDPCVWEEPCQFQPERFLTTHKDID--VRGQNFELIPFGSGR  390 (454)
Q Consensus       317 ~~~~~~R~~~~d~~~~g----~~ip~Gt~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~~~~~--~~~~~~~~~~FG~G~  390 (454)
                      .+.. .|.+.+|.++.+    |.||+|..|.++++.+||||+|||||+.|+|+||+++++...  ..+-...+||||+|.
T Consensus       350 ~~~~-~R~v~~D~tv~~~~~~Y~Ip~G~~valsP~~~hr~peif~dp~~Fk~dRf~~~~~~~~k~g~kl~yy~mpfGaGr  428 (486)
T KOG0684|consen  350 AHSL-MRKVHEDLTVPGSDGEYVIPKGDIVALSPFLLHRDPEIFPDPEDFKPDRFLKDNGESKKNGEKLDYYYMPFGAGR  428 (486)
T ss_pred             hhhH-HHhhccceeeccCCcceecCCCCEEEeccccccCCccccCChhhCChhhccCCCcccccccccccccccccCCCc
Confidence            9998 699999998865    999999999999999999999999999999999998764321  222445569999999


Q ss_pred             CCCCchhHHHHHHHHHHHHHhhcceeeCCCCCCCCcccccCceeccCCCeEEEEeecC
Q 012878          391 RMCPAVSYGLQVMQLMLASLVHGFDFTTPSGEPVDMAETMGLTSAKATPLEVLVSPRL  448 (454)
Q Consensus       391 r~C~G~~la~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~  448 (454)
                      |.|||++||.+|+|.++..+|++|++++.+++-+.. +....+..|.++++++.+.|+
T Consensus       429 ~~CpGr~FA~~eIk~~~~l~L~~fdleLid~~~P~~-d~s~~v~~P~g~v~irYK~R~  485 (486)
T KOG0684|consen  429 HRCPGRSFAYLEIKQFISLLLRHFDLELIDGPFPEV-DYSRMVMQPEGDVRIRYKRRP  485 (486)
T ss_pred             CCCCchHHHHHHHHHHHHHHHHHcceeecCCCCCCC-CHHHhhcCCCCCceEEEeecC
Confidence            999999999999999999999999999999732222 333446689999999999986


No 31 
>PLN02648 allene oxide synthase
Probab=100.00  E-value=5.7e-56  Score=422.77  Aligned_cols=379  Identities=15%  Similarity=0.185  Sum_probs=268.3

Q ss_pred             ccccCC-eEEEEcCCeeE-------EEecCHHHHHHHHHh----CCcccCCCCcchhhhhhccCCeeeEeCCCChhHHHH
Q 012878            2 ADKYGP-IFTMKLGVKQA-------LMVSNWEIAKECFTT----NDKAFASRPKTMAMELLEYNFSVISFAPYGNYWRQS   69 (454)
Q Consensus         2 ~~~yG~-v~~i~~~~~~~-------vvv~dp~~~~~il~~----~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~   69 (454)
                      .+|||+ ||+++++|.|.       |+++||++++.+|.+    +.+.|........ .+++.+....++..+|+.|+++
T Consensus        51 ~~kyG~~vfk~~l~g~p~~~~~~~~v~~~~~e~~~~v~~~~~~~~~~~~~~~~~~~~-~l~G~~~~~s~~~~~g~~H~r~  129 (480)
T PLN02648         51 VEKYKSTVFRVNMPPGPFIAPDPRVIALLDQKSFPVLFDVSKVDKRDVFTGTYMPST-AFTGGYRVLSYLDPSEPKHAKL  129 (480)
T ss_pred             HHHhCCceEEecCCCCCCCCCCCCEEEEEcCCceeeeecchhccccccceeeeccCc-cccCCceeeeecCCCCchHHHH
Confidence            468999 99999988665       999999999999985    4444544333222 3444221124556789999999


Q ss_pred             HHHHHHhhcChHHHHHhHHHHHHHHHHHHHHHHhccccCCCCCcceeecHHHHHHHHHHHHHHHHHhCCCCCCcchhHHH
Q 012878           70 LKIATIELLSSHRLEKLKHVREYEVKASIQRLYKNCVSSSSSRKVVLVDMIHWLEGTVLDVVLRIIAGKRHTSQSQEIND  149 (454)
Q Consensus        70 R~~~~~~~f~~~~~~~~~~~~~~~~~~li~~l~~~~~~~~~g~~~~~vdl~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~  149 (454)
                      |+++. ++|+. .++++.+.|.+.++++++.|...   ...+ .  ++|+.+.++.+++|++++++||.+.+. ......
T Consensus       130 Rrll~-~~f~~-~~~~~~~~m~~~~~~~~~~w~~~---~~~~-~--~vdv~~~~~~lt~~vi~~~lfG~~~~~-~~l~~~  200 (480)
T PLN02648        130 KSFLF-ELLKS-RHRRFIPEFRAAFAELFDTWEAE---LAKK-G--KAEFNDPLDQMAFNFLCKALTGKDPSE-TALGSD  200 (480)
T ss_pred             HHHHH-HHHHH-hhhhhhhHHHHHHHHHHHHHHHH---HhhC-C--CccccchHHHHHHHHHHHHHcCCCcch-hhhccc
Confidence            99998 89994 67889999999999999999653   2334 4  799999999999999999999987741 101111


Q ss_pred             HHHHHHHHHHhhcchhhhhhcc-ccccccc---cchHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCchHHHHHHhc
Q 012878          150 WQRQITKFTALTGQFVVSDALP-FLRWLDI---GGYERLMSKTAKYFDIILQEWLDEHKMKRVSGEVKGDEDFIYVLLSL  225 (454)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~P-~l~~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~l~~ll~~  225 (454)
                      +......+............+| ++..+..   ...........+.+.++++                   +.++.+++.
T Consensus       201 ~~~~~~~~~~~~~~p~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~ll~~  261 (480)
T PLN02648        201 GPALIQKWLALQLAPLASTGLPHVLEELLLHTFPLPFFLVKSDYDKLYDFFR-------------------ASATEALDL  261 (480)
T ss_pred             hhHHHHHHHHHHhhHHHHcCchHHHHHHhhcccCCchhhhhccHHHHHHHHH-------------------HHHHHHHHH
Confidence            1111111111000000000001 0000000   0000000000111111111                   111233332


Q ss_pred             cccccccCCCCCc-HHHHHHHHHH-HHHccccchHHHHHHHHHHHHhChh-HHHHHHHHHhHhhcC-CCCCCcccccCcH
Q 012878          226 LDDNAEQLPDRDA-DTVIKAICVT-LIVAAADTTVVTLTWAIALLLNNRD-VLKKAQDELDIQVGT-KRQVNGSDMRNLV  301 (454)
Q Consensus       226 ~~~~~~~~~~~~~-~~~i~~~~~~-~~~ag~~tta~~l~~~l~~L~~~pe-~q~~l~~Ei~~~~~~-~~~~~~~~~~~lp  301 (454)
                      ..+.       .+ ++++.++++. +.+++++||+++++|++++|++||+ +|++|++|++++++. +..++.+++++||
T Consensus       262 ~~~~-------~l~~~ei~~~~l~~~~~~t~~~~~~~l~~~l~~L~~~p~~v~~klr~Ei~~~~~~~~~~~t~~~l~~l~  334 (480)
T PLN02648        262 AEKF-------GISREEALHNLLFVLGFNAFGGFKIFFPALLKWVGRAGEELQARLAEEVRSAVKAGGGGVTFAALEKMP  334 (480)
T ss_pred             HHhc-------CCCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCCCHHHHhcCH
Confidence            2221       36 8889988875 4467788888999999999999995 999999999999863 4568999999999


Q ss_pred             HHHHHHHHHhhcCCCCcCCCccccccccccc----ceEeCCCCeEEeehhhhhcCCCCCCCCCCCCCCCcCCCCCCcCcc
Q 012878          302 YLQAMIKETMRLYPALPLLLPHESIEECTVN----GYHVPAGTQLFVNAWKIQRDPCVWEEPCQFQPERFLTTHKDIDVR  377 (454)
Q Consensus       302 ~l~a~i~E~lRl~~~~~~~~~R~~~~d~~~~----g~~ip~Gt~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~~~~~~~  377 (454)
                      ||++||+|+||++|++++. .|.+.+|++++    ||.||||+.|+++.+.+||||++||||++|+|+||+++..+    
T Consensus       335 yl~avi~EtLRl~p~v~~~-~r~a~~d~~l~~~~~g~~IpkG~~V~~~~~~~hrdp~~~~dP~~F~PeRf~~~~~~----  409 (480)
T PLN02648        335 LVKSVVYEALRIEPPVPFQ-YGRAREDFVIESHDAAFEIKKGEMLFGYQPLVTRDPKVFDRPEEFVPDRFMGEEGE----  409 (480)
T ss_pred             HHHHHHHHHHhhcCCcccc-cceecCCEEEecCCceEEECCCCEEEEChHHHhCCcccCCCcceeCCCCCCCCCcc----
Confidence            9999999999999999998 68899999995    79999999999999999999999999999999999865321    


Q ss_pred             CCCcceecc---------cCCCCCCCchhHHHHHHHHHHHHHhhcce-eeCCCCC
Q 012878          378 GQNFELIPF---------GSGRRMCPAVSYGLQVMQLMLASLVHGFD-FTTPSGE  422 (454)
Q Consensus       378 ~~~~~~~~F---------G~G~r~C~G~~la~~~~~~~l~~ll~~~~-~~~~~~~  422 (454)
                       ....+++|         |+|+|.|+|++||++|++++++.|+++|+ +++.++.
T Consensus       410 -~~~~~~~f~~g~~~~~~G~G~R~C~G~~~A~~e~~~~la~Ll~~f~~~~l~~~~  463 (480)
T PLN02648        410 -KLLKYVFWSNGRETESPTVGNKQCAGKDFVVLVARLFVAELFLRYDSFEIEVDT  463 (480)
T ss_pred             -ccccccccCCCcccCCCCCCCccCccHHHHHHHHHHHHHHHHHHhCEEeecCCc
Confidence             11234444         67789999999999999999999999998 9987653


No 32 
>COG2124 CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00  E-value=1.7e-54  Score=408.14  Aligned_cols=374  Identities=24%  Similarity=0.304  Sum_probs=297.0

Q ss_pred             ccccCCeEEEEcCCee--EEEecCHHHHHHHHHhCCcccCCCCcchhh-h-hhccCCeeeEeCCCChhHHHHHHHHHHhh
Q 012878            2 ADKYGPIFTMKLGVKQ--ALMVSNWEIAKECFTTNDKAFASRPKTMAM-E-LLEYNFSVISFAPYGNYWRQSLKIATIEL   77 (454)
Q Consensus         2 ~~~yG~v~~i~~~~~~--~vvv~dp~~~~~il~~~~~~f~~~~~~~~~-~-~~~~~~~~~~~~~~~~~w~~~R~~~~~~~   77 (454)
                      .+.||.++.++..++.  .+++++++.+++++.+.. .++........ . .....+...++..+|+.|+++||+++ ++
T Consensus        32 ~~p~~~~~~~~~~~~~~~~~~~s~~~~v~~v~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ll~~dg~~H~r~Rkl~~-~~  109 (411)
T COG2124          32 EDPYGDYFTLRLPGPGDGFWVVSRPADVREVLRDPR-FFSSALGAGLRPRLLRPVLGDGSLLTLDGPEHTRLRKLLA-PA  109 (411)
T ss_pred             hCCCchhhhhhccCccceEEEEcCHHHHHHHHcCcc-cccccccccccccchhhhccccceeecCCHHHHHHHHHhc-cc
Confidence            4578888888876544  899999999999998873 22222111111 0 01111222256678999999999998 89


Q ss_pred             cChHHHHHhHHHHHHHHHHHHHHHHhccccCCCCCcceeecHHHHHHHHHHHHHHHHHhCCCCCCcchhHHHHHHHHHHH
Q 012878           78 LSSHRLEKLKHVREYEVKASIQRLYKNCVSSSSSRKVVLVDMIHWLEGTVLDVVLRIIAGKRHTSQSQEINDWQRQITKF  157 (454)
Q Consensus        78 f~~~~~~~~~~~~~~~~~~li~~l~~~~~~~~~g~~~~~vdl~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~  157 (454)
                      |+++.++++.+.+.+.++++++.+ ..    . .    ..++.+.+..+++++|+ .+||.+.+    +...+..+....
T Consensus       110 F~~~~~~~~~~~i~~~~~~~~~~~-~~----~-~----~~~v~~~a~~l~~~vi~-~l~Gv~~~----~~~~~~~~~~~~  174 (411)
T COG2124         110 FTPRALRGYRPLIREIADRLLDDL-WQ----G-G----ADLVLDFAAELTLRVIA-ELLGVPLE----DRPQLLRWSDAL  174 (411)
T ss_pred             cCHHHHHHHHHHHHHHHHHHHHhc-cc----C-C----chhHHHHhhhhhHHHHH-HHhCCCHH----HHHHHHHHHHHH
Confidence            999999999999999999999999 43    1 3    78999999999999999 99999884    112222222222


Q ss_pred             HHhhcchhhhhhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCchHHHHHHhccccccccCCCCC
Q 012878          158 TALTGQFVVSDALPFLRWLDIGGYERLMSKTAKYFDIILQEWLDEHKMKRVSGEVKGDEDFIYVLLSLLDDNAEQLPDRD  237 (454)
Q Consensus       158 ~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~  237 (454)
                      ....        .|....   .....+..++...+.+++.++|++++.       ...+|+++.|+....++     +..
T Consensus       175 ~~~~--------~~~~~~---~~~~~~~~~a~~~~~~~~~~li~~rR~-------~~~~dlls~l~~a~~~~-----~~~  231 (411)
T COG2124         175 LLRL--------DPDLGP---EEPWRRARAARRELDAYLRALIAERRA-------APRDDLLSLLLSAEDDG-----GGR  231 (411)
T ss_pred             Hhcc--------CcccCC---cccHHHHHHHHHHHHHHHHHHHHHhcc-------CCcccHHHHHHHHhhCC-----CCc
Confidence            2210        011111   112466778889999999999999883       45779999999887775     335


Q ss_pred             c-HHHHHHHHHHHHHccccchHHHHHHHHHHHHhChhHHHHHHHHHhHhhcCCCCCCcccccCcHHHHHHHHHHhhcCCC
Q 012878          238 A-DTVIKAICVTLIVAAADTTVVTLTWAIALLLNNRDVLKKAQDELDIQVGTKRQVNGSDMRNLVYLQAMIKETMRLYPA  316 (454)
Q Consensus       238 ~-~~~i~~~~~~~~~ag~~tta~~l~~~l~~L~~~pe~q~~l~~Ei~~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~~~  316 (454)
                      + +++|.++++++++||+|||+++|+|+++.|++||+.++++++|.+.                ||+.++|+|+||++|+
T Consensus       232 lsd~Ei~~~~~~ll~AGheTTa~~l~~a~~~L~~~P~~~~~l~~e~~~----------------~~~~~~v~E~LR~~pp  295 (411)
T COG2124         232 LSDDEIRDELITLLVAGHETTANALAWALYALLRHPDQLAKLRAEPDR----------------PLLEAVVEETLRLYPP  295 (411)
T ss_pred             CCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHCchHHHHHHhCcch----------------HHHHHHHHHHHHhCCc
Confidence            7 9999999999999999999999999999999999999999999765                8899999999999999


Q ss_pred             CcCCCcccccccccccceEeCCCCeEEeehhhhhcCCCCCCCCCCCCCCCcCCCCCCcCccCCCcceecccCCCCCCCch
Q 012878          317 LPLLLPHESIEECTVNGYHVPAGTQLFVNAWKIQRDPCVWEEPCQFQPERFLTTHKDIDVRGQNFELIPFGSGRRMCPAV  396 (454)
Q Consensus       317 ~~~~~~R~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~~~~~~~~~~~~~~~FG~G~r~C~G~  396 (454)
                      ++. +.|.+.+|++++|+.||||+.|.++++++||||++|+||++|+|+||.            ..|+|||+|+|.|+|.
T Consensus       296 v~~-~~R~~~~d~~igg~~Ip~G~~V~~~~~~anrDp~~f~~P~~F~p~R~~------------~~~l~FG~G~H~ClG~  362 (411)
T COG2124         296 VPL-ARRVATEDVELGGYRIPAGTVVLLSIGAANRDPEVFPDPDEFDPERFN------------NAHLPFGGGPHRCLGA  362 (411)
T ss_pred             hhc-cceeccCCEeeCCEEeCCCCEEEecHhhhcCChhhCCChhhcCCCCCC------------CCCcCCCCCCccccCH
Confidence            999 589999999999999999999999999999999999999999999996            4579999999999999


Q ss_pred             hHHHHHHHHHHHHHhhcceeeCCCCCCCCcccccCceeccCCCeEEEEeec
Q 012878          397 SYGLQVMQLMLASLVHGFDFTTPSGEPVDMAETMGLTSAKATPLEVLVSPR  447 (454)
Q Consensus       397 ~la~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r  447 (454)
                      +||++|++++++.++++|++....+ ....  ....+..+..+.++.++.|
T Consensus       363 ~lA~~E~~~~l~~ll~r~~~~~~~~-~~~~--~~~~~~~~~g~~~l~v~~~  410 (411)
T COG2124         363 ALARLELKVALAELLRRFPLLLLAE-PPPL--VRRPTLVPRGGERLPVRRR  410 (411)
T ss_pred             HHHHHHHHHHHHHHHHhCchhhcCC-CCCc--cccccccCCCcceeeeecC
Confidence            9999999999999999999887765 2112  1223344666777777655


No 33 
>PF08492 SRP72:  SRP72 RNA-binding domain;  InterPro: IPR013699  The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. This entry represents the RNA binding domain of the SRP72 subunit. This domain is responsible for the binding of SRP72 to the 7S SRP RNA []. ; GO: 0008312 7S RNA binding, 0006614 SRP-dependent cotranslational protein targeting to membrane, 0048500 signal recognition particle
Probab=71.35  E-value=2.5  Score=27.30  Aligned_cols=9  Identities=44%  Similarity=0.933  Sum_probs=6.8

Q ss_pred             CCCCcCCCC
Q 012878          363 QPERFLTTH  371 (454)
Q Consensus       363 ~P~R~l~~~  371 (454)
                      ||||||.-.
T Consensus        44 DPERWLP~~   52 (59)
T PF08492_consen   44 DPERWLPKR   52 (59)
T ss_pred             CccccCchh
Confidence            789998753


No 34 
>PF12554 MOZART1:  Mitotic-spindle organizing gamma-tubulin ring associated;  InterPro: IPR022214  This family of proteins is found in eukaryotes. Proteins in this family are typically between 71 and 105 amino acids in length. There is a single completely conserved residue L that may be functionally important. 
Probab=60.33  E-value=28  Score=21.46  Aligned_cols=42  Identities=14%  Similarity=0.092  Sum_probs=33.5

Q ss_pred             HHHHHHHHHHHccccchHHHHHHHHHHHHhChhHHHHHHHHH
Q 012878          241 VIKAICVTLIVAAADTTVVTLTWAIALLLNNRDVLKKAQDEL  282 (454)
Q Consensus       241 ~i~~~~~~~~~ag~~tta~~l~~~l~~L~~~pe~q~~l~~Ei  282 (454)
                      +++..+..++-.|.+..+-.+.-.|.+..-||+....+-.|+
T Consensus         6 d~l~eiS~lLntgLd~etL~ici~L~e~GVnPeaLA~vI~el   47 (48)
T PF12554_consen    6 DVLHEISDLLNTGLDRETLSICIELCENGVNPEALAAVIKEL   47 (48)
T ss_pred             HHHHHHHHHHcCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHh
Confidence            456666777777888888888888888888999888888776


No 35 
>PF05952 ComX:  Bacillus competence pheromone ComX;  InterPro: IPR009233 Competence is the ability of a cell to take up exogenous DNA from its environment, resulting in transformation. It is widespread among bacteria and is probably an important mechanism for the horizontal transfer of genes. Cells that take up DNA inevitably acquire the nucleotides the DNA consists of, and, because nucleotides are needed for DNA and RNA synthesis and are expensive to synthesise, these may make a significant contribution to the cell's energy budget []. The lateral gene transfer caused by competence also contributes to the genetic diversity that makes evolution possible.  DNA usually becomes available by the death and lysis of other cells. Competent bacteria use components of extracellular filaments called type 4 pili to create pores in their membranes and pull DNA through the pores into the cytoplasm. This process, including the development of competence and the expression of the uptake machinery, is regulated in response to cell-cell signalling and/or nutritional conditions []. Natural genetic competence in Bacillus subtilis is controlled by quorum-sensing (QS). The ComP- ComA two-component system detects the signalling molecule ComX, and this signal is transduced by a conserved phosphotransfer mechanism. ComX is synthesised as an inactive precursor and is then cleaved and modified by ComQ before export to the extracellular environment [].
Probab=45.92  E-value=10  Score=24.26  Aligned_cols=24  Identities=25%  Similarity=0.436  Sum_probs=18.9

Q ss_pred             HHHHHHhChhHHHHHHHHHhHhhc
Q 012878          264 AIALLLNNRDVLKKAQDELDIQVG  287 (454)
Q Consensus       264 ~l~~L~~~pe~q~~l~~Ei~~~~~  287 (454)
                      .+.+|.+||++.++|.+.=.+.+|
T Consensus         5 iV~YLv~nPevl~kl~~g~asLIG   28 (57)
T PF05952_consen    5 IVNYLVQNPEVLEKLKEGEASLIG   28 (57)
T ss_pred             HHHHHHHChHHHHHHHcCCeeEec
Confidence            567999999999999986555444


No 36 
>KOG3506 consensus 40S ribosomal protein S29 [Translation, ribosomal structure and biogenesis]
Probab=43.13  E-value=11  Score=23.64  Aligned_cols=11  Identities=45%  Similarity=0.942  Sum_probs=9.1

Q ss_pred             ecccCCCCCCC
Q 012878          384 IPFGSGRRMCP  394 (454)
Q Consensus       384 ~~FG~G~r~C~  394 (454)
                      -+||-|+|.|-
T Consensus        12 ~kfg~GsrsC~   22 (56)
T KOG3506|consen   12 RKFGQGSRSCR   22 (56)
T ss_pred             cccCCCCccee
Confidence            46999999984


No 37 
>PF12508 DUF3714:  Protein of unknown function (DUF3714) ;  InterPro: IPR022187  Proteins in this entry are designated TraM and are found in a proposed transfer region of a class of conjugative transposon found in the Bacteroides lineage. 
Probab=40.68  E-value=21  Score=30.07  Aligned_cols=43  Identities=19%  Similarity=0.301  Sum_probs=32.5

Q ss_pred             cHHHHHHHHHHhhcCCCCcCCCcccccccccccceEeCCCCeEEe
Q 012878          300 LVYLQAMIKETMRLYPALPLLLPHESIEECTVNGYHVPAGTQLFV  344 (454)
Q Consensus       300 lp~l~a~i~E~lRl~~~~~~~~~R~~~~d~~~~g~~ip~Gt~v~~  344 (454)
                      -..+.|||.|+.-+..-..+.  =+..+|+.++|..|||||.+.-
T Consensus        52 ~n~I~A~V~~~qtv~~Gs~vr--lRLle~i~i~g~~IPkgt~l~G   94 (200)
T PF12508_consen   52 KNTIRAVVDGTQTVVDGSRVR--LRLLEDIQIGGILIPKGTYLYG   94 (200)
T ss_pred             CCeEEEEEecceEEeCCCEEE--EEEcCceEECCEEeCCCCEEEE
Confidence            345788999998776654443  2456789999999999999865


No 38 
>PF14129 DUF4296:  Domain of unknown function (DUF4296)
Probab=36.21  E-value=1.6e+02  Score=20.88  Aligned_cols=48  Identities=8%  Similarity=0.007  Sum_probs=41.0

Q ss_pred             HHHHHHHHHHHHHccccchHHHHHHHHHHHHhChhHHHHHHHHHhHhh
Q 012878          239 DTVIKAICVTLIVAAADTTVVTLTWAIALLLNNRDVLKKAQDELDIQV  286 (454)
Q Consensus       239 ~~~i~~~~~~~~~ag~~tta~~l~~~l~~L~~~pe~q~~l~~Ei~~~~  286 (454)
                      .+.........++--+..++....-.+.+-++||+...++.+.+...+
T Consensus        31 ~~~~~~~~~~~I~kKy~Ids~~f~~S~~YY~~~p~~~~~Iy~~V~~rL   78 (87)
T PF14129_consen   31 SDDNMIAYYQYIFKKYGIDSAQFDSSMVYYSRNPEEYEKIYDKVIERL   78 (87)
T ss_pred             HHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence            455666667888999999999999999999999999999999887654


No 39 
>PF09201 SRX:  SRX;  InterPro: IPR015284  The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. The SR receptor is a monomer consisting of the loosely membrane-associated SR-alpha homologue FtsY, while the eukaryotic SR receptor is a heterodimer of SR-alpha (70 kDa) and SR-beta (25 kDa), both of which contain a GTP-binding domain []. SR-alpha regulates the targeting of SRP-ribosome-nascent polypeptide complexes to the translocon []. SR-alpha binds to the SRP54 subunit of the SRP complex. The SR-beta subunit is a transmembrane GTPase that anchors the SR-alpha subunit (a peripheral membrane GTPase) to the ER membrane []. SR-beta interacts with the N-terminal SRX-domain of SR-alpha, which is not present in the bacterial FtsY homologue. SR-beta also functions in recruiting the SRP-nascent polypeptide to the protein-conducting channel.  This entry represents a homologue of the alpha subunit of the SR receptor. Members of this entry consist of a central six-stranded anti-parallel beta-sheet sandwiched by helix alpha1 on one side and helices alpha2-alpha4 on the other. They interact with the small GTPase SR-beta, forming a complex that matches a class of small G protein-effector complexes, including Rap-Raf, Ras-PI3K(gamma), Ras-RalGDS, and Arl2-PDE(delta) []. ; PDB: 1NRJ_A.
Probab=34.41  E-value=36  Score=26.32  Aligned_cols=23  Identities=9%  Similarity=0.289  Sum_probs=17.1

Q ss_pred             CCCCchhHHHHHHHHHHHHHhhc
Q 012878          391 RMCPAVSYGLQVMQLMLASLVHG  413 (454)
Q Consensus       391 r~C~G~~la~~~~~~~l~~ll~~  413 (454)
                      -.|.|++||...+..+|..++..
T Consensus        18 yN~~gKKFsE~QiN~FIs~lIts   40 (148)
T PF09201_consen   18 YNCLGKKFSETQINAFISHLITS   40 (148)
T ss_dssp             EETTS----HHHHHHHHHHHHHS
T ss_pred             ecccchHHHHHHHHHHHHHHhcC
Confidence            47999999999999999999875


No 40 
>PRK06789 flagellar motor switch protein; Validated
Probab=31.99  E-value=46  Score=22.79  Aligned_cols=39  Identities=13%  Similarity=0.182  Sum_probs=32.2

Q ss_pred             HHHHhhcCCCCcCCCcccccccc--cccceEeCCCCeEEee
Q 012878          307 IKETMRLYPALPLLLPHESIEEC--TVNGYHVPAGTQLFVN  345 (454)
Q Consensus       307 i~E~lRl~~~~~~~~~R~~~~d~--~~~g~~ip~Gt~v~~~  345 (454)
                      ++|.+.+.+-.-..+-|.+.+.+  .++|..|.+|..|.++
T Consensus        22 i~dll~L~~Gsvi~Ldk~~~epvdI~vNg~lia~GEvVvv~   62 (74)
T PRK06789         22 IEDLLHITKGTLYRLENSTKNTVRLMLENEEIGTGKILTKN   62 (74)
T ss_pred             HHHHhcCCCCCEEEeCCcCCCCEEEEECCEEEeEEeEEEEC
Confidence            78999999988888777777764  4599999999999775


No 41 
>PHA03162 hypothetical protein; Provisional
Probab=30.50  E-value=45  Score=25.47  Aligned_cols=25  Identities=20%  Similarity=0.430  Sum_probs=20.5

Q ss_pred             cCCCCCCCchhHHHHHHHHHHHHHh
Q 012878          387 GSGRRMCPAVSYGLQVMQLMLASLV  411 (454)
Q Consensus       387 G~G~r~C~G~~la~~~~~~~l~~ll  411 (454)
                      ++|++.|||+++.+-++-.=|+.|=
T Consensus         2 ~~~~k~~pk~~~tmEeLaaeL~kLq   26 (135)
T PHA03162          2 AGGSKKCPKAQPTMEDLAAEIAKLQ   26 (135)
T ss_pred             CCCcCCCCccCCCHHHHHHHHHHHH
Confidence            4699999999999998877666653


No 42 
>PF13893 RRM_5:  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain); PDB: 2PE8_A 2PEH_A 2D9O_A 1A9N_D 2DIT_A 3S6E_A 2LQ5_A 1SJQ_A 2AD9_A 1X4D_A ....
Probab=29.78  E-value=98  Score=19.30  Aligned_cols=30  Identities=17%  Similarity=0.182  Sum_probs=22.0

Q ss_pred             cccCCeEEEEcCC----eeEEEecCHHHHHHHHH
Q 012878            3 DKYGPIFTMKLGV----KQALMVSNWEIAKECFT   32 (454)
Q Consensus         3 ~~yG~v~~i~~~~----~~~vvv~dp~~~~~il~   32 (454)
                      .+||+|.++.+..    .-.|-..+++.++.+..
T Consensus         6 ~~fG~V~~i~~~~~~~~~a~V~f~~~~~A~~a~~   39 (56)
T PF13893_consen    6 SKFGEVKKIKIFKKKRGFAFVEFASVEDAQKAIE   39 (56)
T ss_dssp             TTTS-EEEEEEETTSTTEEEEEESSHHHHHHHHH
T ss_pred             CCcccEEEEEEEeCCCCEEEEEECCHHHHHHHHH
Confidence            5899998888643    34666779999888875


No 43 
>PHA01346 hypothetical protein
Probab=28.07  E-value=53  Score=19.28  Aligned_cols=18  Identities=28%  Similarity=0.416  Sum_probs=14.1

Q ss_pred             HhChhH-HHHHHHHHhHhh
Q 012878          269 LNNRDV-LKKAQDELDIQV  286 (454)
Q Consensus       269 ~~~pe~-q~~l~~Ei~~~~  286 (454)
                      ..+|++ |+++.+|+++.+
T Consensus        27 vsdpdfsqekihaeldsll   45 (53)
T PHA01346         27 VSDPDFSQEKIHAELDSLL   45 (53)
T ss_pred             cCCCCccHHHHHHHHHHHH
Confidence            357885 999999988765


No 44 
>PF14550 Peptidase_U35_2:  Putative phage protease XkdF
Probab=27.96  E-value=42  Score=25.63  Aligned_cols=23  Identities=22%  Similarity=0.316  Sum_probs=19.1

Q ss_pred             cccccccccccceEeCCCCeEEe
Q 012878          322 PHESIEECTVNGYHVPAGTQLFV  344 (454)
Q Consensus       322 ~R~~~~d~~~~g~~ip~Gt~v~~  344 (454)
                      +-+++.|.+++|-.||+||.|..
T Consensus        70 S~I~~~d~~~~g~~i~~GtWv~~   92 (122)
T PF14550_consen   70 SYIAPEDMEIGGETIPKGTWVVG   92 (122)
T ss_pred             EEecCCCcccCCeeecceEEEEE
Confidence            35677799999999999999954


No 45 
>PF11227 DUF3025:  Protein of unknown function (DUF3025);  InterPro: IPR021390  Some members in this bacterial family of proteins are annotated as transmembrane proteins however this cannot be confirmed. Currently this family of proteins has no known function. 
Probab=27.53  E-value=34  Score=28.90  Aligned_cols=20  Identities=30%  Similarity=0.811  Sum_probs=17.7

Q ss_pred             hhhhcCCCCCCCCCCCCCCC
Q 012878          347 WKIQRDPCVWEEPCQFQPER  366 (454)
Q Consensus       347 ~~~~~d~~~~~dp~~F~P~R  366 (454)
                      +.-|.|+.+|.|++.|+|.|
T Consensus       192 ~~~n~~~~FY~d~~~FRp~R  211 (212)
T PF11227_consen  192 WPDNEDPAFYDDTDVFRPGR  211 (212)
T ss_pred             CCCCCCcccccCccccCCCC
Confidence            34599999999999999988


No 46 
>PF07886 BA14K:  BA14K-like protein;  InterPro: IPR012413 The sequences found in this family are similar to the BA14K proteins expressed by Brucella abortus (Q44701 from SWISSPROT) and by Brucella suis (Q8FVU0 from SWISSPROT). BA14K was found to be strongly immunoreactive; it induces both humoral and cellular responses in hosts throughout the infective process []. 
Probab=26.93  E-value=62  Score=17.84  Aligned_cols=16  Identities=25%  Similarity=0.663  Sum_probs=13.1

Q ss_pred             CCcceecccCCCCCCC
Q 012878          379 QNFELIPFGSGRRMCP  394 (454)
Q Consensus       379 ~~~~~~~FG~G~r~C~  394 (454)
                      ....|+|+.+..|.|.
T Consensus        16 ~~~Ty~~~~G~r~~C~   31 (31)
T PF07886_consen   16 RDNTYQPYDGPRRFCR   31 (31)
T ss_pred             CCCcEeCCCCccccCc
Confidence            3577999999999984


No 47 
>KOG0114 consensus Predicted RNA-binding protein (RRM superfamily) [General function prediction only]
Probab=26.60  E-value=1.3e+02  Score=22.24  Aligned_cols=31  Identities=23%  Similarity=0.291  Sum_probs=25.1

Q ss_pred             ccCCeEEEEcCC------eeEEEecCHHHHHHHHHhC
Q 012878            4 KYGPIFTMKLGV------KQALMVSNWEIAKECFTTN   34 (454)
Q Consensus         4 ~yG~v~~i~~~~------~~~vvv~dp~~~~~il~~~   34 (454)
                      +||+|..|++|-      .-+||-.|-..++..+.+-
T Consensus        41 kyg~IrQIRiG~~k~TrGTAFVVYedi~dAk~A~dhl   77 (124)
T KOG0114|consen   41 KYGTIRQIRIGNTKETRGTAFVVYEDIFDAKKACDHL   77 (124)
T ss_pred             cccceEEEEecCccCcCceEEEEehHhhhHHHHHHHh
Confidence            799999999874      4478888888888888654


No 48 
>PF14483 Cut8_M:  Cut8 dimerisation domain; PDB: 3Q5W_A 3Q5X_A.
Probab=26.33  E-value=1.1e+02  Score=17.83  Aligned_cols=18  Identities=6%  Similarity=0.135  Sum_probs=11.8

Q ss_pred             HHHHHHH-hChhHHHHHHH
Q 012878          263 WAIALLL-NNRDVLKKAQD  280 (454)
Q Consensus       263 ~~l~~L~-~~pe~q~~l~~  280 (454)
                      ..+..++ +|||+++.++.
T Consensus        17 ~lL~~l~~~HPei~~~i~~   35 (38)
T PF14483_consen   17 SLLQSLCERHPEIQQEIRS   35 (38)
T ss_dssp             HHHHHHHHHSTHHHHHHHT
T ss_pred             HHHHHHHHhChhHHHHHHh
Confidence            3344444 89998887764


No 49 
>PF09926 DUF2158:  Uncharacterized small protein (DUF2158);  InterPro: IPR019226 This entry represents a family of predominantly prokaryotic proteins with no known function. 
Probab=24.29  E-value=74  Score=20.16  Aligned_cols=18  Identities=17%  Similarity=0.303  Sum_probs=15.2

Q ss_pred             cCCeEEEEcCCeeEEEec
Q 012878            5 YGPIFTMKLGVKQALMVS   22 (454)
Q Consensus         5 yG~v~~i~~~~~~~vvv~   22 (454)
                      =|+|++++-||+.++|..
T Consensus         3 ~GDvV~LKSGGp~MTV~~   20 (53)
T PF09926_consen    3 IGDVVQLKSGGPRMTVTE   20 (53)
T ss_pred             CCCEEEEccCCCCeEEEE
Confidence            389999999998888774


No 50 
>PF13993 YccJ:  YccJ-like protein
Probab=23.42  E-value=1e+02  Score=19.98  Aligned_cols=31  Identities=32%  Similarity=0.285  Sum_probs=24.6

Q ss_pred             HccccchHHHHHHHHHHHHhChhH-HHHHHHH
Q 012878          251 VAAADTTVVTLTWAIALLLNNRDV-LKKAQDE  281 (454)
Q Consensus       251 ~ag~~tta~~l~~~l~~L~~~pe~-q~~l~~E  281 (454)
                      +|..-.|+.-+.-++++|+.+.|. -+++.+|
T Consensus         8 WA~~ReTS~EIAeAIFElA~~dE~lAekIWee   39 (69)
T PF13993_consen    8 WANVRETSIEIAEAIFELANNDEVLAEKIWEE   39 (69)
T ss_pred             HHHHhcCCHHHHHHHHHHhcccHHHHHHHHHc
Confidence            455667888899999999999985 4667766


No 51 
>COG1759 5-formaminoimidazole-4-carboxamide-1-beta-D-ribofuranosyl    5'-monophosphate synthetase (purine biosynthesis) [Nucleotide transport and    metabolism]
Probab=22.49  E-value=1.4e+02  Score=27.19  Aligned_cols=69  Identities=13%  Similarity=0.269  Sum_probs=41.8

Q ss_pred             HHHHHHHhhcCCCCcC---CCcccccccccc---c-ceEeCCCCeEEeehhhhhcCCCCCCCCCCCCCCCcCCCCCCcCc
Q 012878          304 QAMIKETMRLYPALPL---LLPHESIEECTV---N-GYHVPAGTQLFVNAWKIQRDPCVWEEPCQFQPERFLTTHKDIDV  376 (454)
Q Consensus       304 ~a~i~E~lRl~~~~~~---~~~R~~~~d~~~---~-g~~ip~Gt~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~~~~~~  376 (454)
                      +.+++.+..+.||.-.   .+.-..+.|..+   + .-+|..||-|.++                               
T Consensus       276 er~V~a~kel~~PG~iGpFcLq~~~t~dl~~vVfevS~Ri~gGTNv~~~-------------------------------  324 (361)
T COG1759         276 ERFVEATKELVPPGIIGPFCLQTIVTDDLEFVVFEVSARIVGGTNVYMG-------------------------------  324 (361)
T ss_pred             HHHHHHHHHhcCCCcccceeeeeeecCCccEEEEEEeccccCCcccccC-------------------------------
Confidence            4467778888886543   333344444333   1 3466677766442                               


Q ss_pred             cCCCcceecccCCCCCCCchhHHHHHHHHHH
Q 012878          377 RGQNFELIPFGSGRRMCPAVSYGLQVMQLML  407 (454)
Q Consensus       377 ~~~~~~~~~FG~G~r~C~G~~la~~~~~~~l  407 (454)
                       +.+++++-||-+  +..|+++|. |+|.++
T Consensus       325 -GspYs~l~~~~p--ms~GrRIA~-EIk~A~  351 (361)
T COG1759         325 -GSPYSNLYWGEP--MSTGRRIAR-EIKEAI  351 (361)
T ss_pred             -CCcchhhhcCCC--cchhhHHHH-HHHHHH
Confidence             245566666655  678999997 887765


No 52 
>PF07849 DUF1641:  Protein of unknown function (DUF1641);  InterPro: IPR012440 Archaeal and bacterial hypothetical proteins are found in this family, with the region in question being approximately 40 residues long. 
Probab=22.19  E-value=1.1e+02  Score=18.29  Aligned_cols=19  Identities=16%  Similarity=0.142  Sum_probs=15.0

Q ss_pred             HHHHHHHHhChhHHHHHHH
Q 012878          262 TWAIALLLNNRDVLKKAQD  280 (454)
Q Consensus       262 ~~~l~~L~~~pe~q~~l~~  280 (454)
                      .|-|..++++||+|.-|.=
T Consensus        13 l~gl~~~l~DpdvqrgL~~   31 (42)
T PF07849_consen   13 LFGLLRALRDPDVQRGLGF   31 (42)
T ss_pred             HHHHHHHHcCHHHHHHHHH
Confidence            4677888999999987653


No 53 
>COG4471 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=20.65  E-value=2.4e+02  Score=20.04  Aligned_cols=32  Identities=13%  Similarity=0.138  Sum_probs=24.3

Q ss_pred             cccCCeEEEEcCCeeEEEecCHHHHHHHHHhC
Q 012878            3 DKYGPIFTMKLGVKQALMVSNWEIAKECFTTN   34 (454)
Q Consensus         3 ~~yG~v~~i~~~~~~~vvv~dp~~~~~il~~~   34 (454)
                      ++||+|+-+---.+-.|.-++-+.+.+++.+=
T Consensus        23 rkfG~v~Y~Skk~kY~vlYvn~~~ve~~~~kl   54 (90)
T COG4471          23 RKFGDVHYVSKKSKYVVLYVNEQDVEQIVEKL   54 (90)
T ss_pred             HhcCCEEEEecceeEEEEEECHHHHHHHHHHH
Confidence            58999986654446677778999999998654


No 54 
>cd08780 Death_TRADD Death Domain of Tumor Necrosis Factor Receptor 1-Associated Death Domain protein. Death domain (DD) of TRADD (TNF Receptor 1-Associated Death Domain or TNFRSF1A-associated via death domain) protein. TRADD is a central signaling adaptor for TNF-receptor 1 (TNFR1), mediating activation of Nuclear Factor -kappaB (NF-kB) and c-Jun N-terminal kinase (JNK), as well as caspase-dependent apoptosis. It also carries important immunological roles including germinal center formation, DR3-mediated T-cell stimulation, and TNFalpha-mediated inflammatory responses. In general, DDs are protein-protein interaction domains found in a variety of domain architectures. Their common feature is that they form homodimers by self-association or heterodimers by associating with other members of the DD superfamily including CARD (Caspase activation and recruitment domain), DED (Death Effector Domain), and PYRIN. They serve as adaptors in signaling pathways and can recruit other proteins into s
Probab=20.26  E-value=3.4e+02  Score=19.44  Aligned_cols=69  Identities=14%  Similarity=0.217  Sum_probs=40.6

Q ss_pred             ChhHHHHHHHHH--HhhcChHHHHHhH-----HHHHHHHHHHHHHHHhccccCCCCCcceeecHHHHHHHHHHHHHHHHH
Q 012878           63 GNYWRQSLKIAT--IELLSSHRLEKLK-----HVREYEVKASIQRLYKNCVSSSSSRKVVLVDMIHWLEGTVLDVVLRII  135 (454)
Q Consensus        63 ~~~w~~~R~~~~--~~~f~~~~~~~~~-----~~~~~~~~~li~~l~~~~~~~~~g~~~~~vdl~~~~~~~~~~vi~~~~  135 (454)
                      |..||..=|.+.  ..+++...+..+.     .-+.+.+-+++..|...     +|.+.+.-.+...+...-++.++.-+
T Consensus        13 Gr~WK~laR~Lg~~cral~d~~ID~I~~~y~r~gL~EqvyQ~L~~W~~~-----eg~~Atv~~Lv~AL~~c~l~~lAe~l   87 (90)
T cd08780          13 GKKWKPVGRSLQKNCRALRDPAIDNLAYEYDREGLYEQAYQLLRRFIQS-----EGKKATLQRLVQALEENGLTSLAEDL   87 (90)
T ss_pred             hHHHHHHHHHHcccccccchhHHHHHHhhcccccHHHHHHHHHHHHHHh-----ccccchHHHHHHHHHHccchHHHHHH
Confidence            778988877664  2247776776653     23678888999999886     33121233344444444444444444


Q ss_pred             h
Q 012878          136 A  136 (454)
Q Consensus       136 f  136 (454)
                      +
T Consensus        88 ~   88 (90)
T cd08780          88 L   88 (90)
T ss_pred             h
Confidence            3


Done!