BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 012879
(454 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|225444407|ref|XP_002265471.1| PREDICTED: pentatricopeptide repeat-containing protein At1g09220,
mitochondrial-like [Vitis vinifera]
Length = 470
Score = 549 bits (1414), Expect = e-153, Method: Compositional matrix adjust.
Identities = 276/448 (61%), Positives = 328/448 (73%), Gaps = 8/448 (1%)
Query: 9 TPNNITTQIHSHLLTTNSLLHHSQL--FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHS 66
T + Q+HSHL+TT + H + +N LL YSL PQ+AFLL++ L+ H
Sbjct: 27 TRRSAMQQLHSHLITTGAHSHCMDVTSWNVLLRHYSLGIFPQEAFLLFRHLRL-----HH 81
Query: 67 PLPPLFDSFTYSFLI-RTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFL 125
PPL + + CA L H G QLHA+ K+GF+ HVYV+T L+N+Y + G
Sbjct: 82 VYPPLSFDSFSFSFLLKACANLQHREGGLQLHALTLKLGFEFHVYVHTVLLNVYAACGAF 141
Query: 126 KDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMN 185
++ ++FDEMP RN VTWNV ITGL KWGEL A SL +EMP VVSWT IIDGYTRMN
Sbjct: 142 LEAKQVFDEMPVRNSVTWNVFITGLAKWGELHLACSLLDEMPRPTVVSWTTIIDGYTRMN 201
Query: 186 RSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRV 245
+ +ALALF M E +P+EIT+LA+ PAI G ++ CQLIH YGEK G A DIR+
Sbjct: 202 QPKQALALFLTMFLDEGIKPTEITLLAIFPAISNLGALEICQLIHTYGEKSGLNASDIRI 261
Query: 246 LNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKV 305
L+DTYAKCGCI SAS +F +I+ + +NLVSWTSIIS FAMHGM KEA+ENF RMQK
Sbjct: 262 RTSLLDTYAKCGCIESASGVFGEIAAKGRNLVSWTSIISAFAMHGMAKEALENFERMQKE 321
Query: 306 GLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQ 365
LKPNR+TFLSVLNACSHGGLVEEGL F KMV EC++ PD+KHYGCLIDMLGRAGRL++
Sbjct: 322 CLKPNRITFLSVLNACSHGGLVEEGLKLFTKMVNECQISPDVKHYGCLIDMLGRAGRLDE 381
Query: 366 AEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILA 425
AEK AL IP + +VV+WRTLLGACSFHGNVEMG RVTRKILEMER YGGDYVL+ NI A
Sbjct: 382 AEKMALEIPDYVVNVVIWRTLLGACSFHGNVEMGARVTRKILEMERKYGGDYVLLSNIFA 441
Query: 426 GVGRFGDAERLRRVMDERNAFKVPGCSL 453
GVGRF D ER+RR+MDERNA KVPG S
Sbjct: 442 GVGRFWDVERVRRLMDERNASKVPGLSF 469
>gi|147772248|emb|CAN78346.1| hypothetical protein VITISV_033453 [Vitis vinifera]
Length = 538
Score = 543 bits (1398), Expect = e-152, Method: Compositional matrix adjust.
Identities = 271/443 (61%), Positives = 326/443 (73%), Gaps = 8/443 (1%)
Query: 9 TPNNITTQIHSHLLTTNSLLHHSQL--FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHS 66
T + Q+HSHL+TT + H + +N LL YSL PQ+AFLL++ L+ H
Sbjct: 27 TRRSAMQQLHSHLITTGAHSHCMDVTSWNVLLRHYSLGIFPQEAFLLFRHLRL-----HH 81
Query: 67 PLPPLFDSFTYSFLI-RTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFL 125
PPL + + CA L H G QLHA+ K+GF+ HVYV+T L+N+Y + G
Sbjct: 82 VYPPLSFDSFSFSFLLKACANLQHREGGLQLHALTLKLGFEFHVYVHTVLLNVYAACGAF 141
Query: 126 KDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMN 185
++ ++FDEMP RN VTWNV ITGL KWGEL ARSL +EMP VVSWT IIDGYTRMN
Sbjct: 142 LEAKQVFDEMPVRNSVTWNVFITGLAKWGELHLARSLLDEMPMPTVVSWTTIIDGYTRMN 201
Query: 186 RSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRV 245
+ +ALALF M E +P+EIT+LA+ PAI G ++ CQLIH YGEK G A DIR+
Sbjct: 202 QPKQALALFLTMFLDEGIKPTEITLLAIFPAISNLGALEICQLIHTYGEKSGLNASDIRI 261
Query: 246 LNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKV 305
L+DTYAKCGCI SAS++F +I + +NLVSWTSIIS FAMHGM KEA+ENF RMQK
Sbjct: 262 RTSLLDTYAKCGCIESASRVFGEIDAKSRNLVSWTSIISAFAMHGMAKEALENFERMQKE 321
Query: 306 GLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQ 365
LKPNR+TFLSVLNACSHGGLVEEGL FF KMV + ++ PD+KHYGCLIDMLGRAGRL++
Sbjct: 322 CLKPNRITFLSVLNACSHGGLVEEGLKFFTKMVNKYQISPDVKHYGCLIDMLGRAGRLDE 381
Query: 366 AEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILA 425
AEK AL IP+ + +VV+WRTLLGACSFHGNVEMG RVTRKILEME+ YGGDYVL+ NI A
Sbjct: 382 AEKMALEIPNYVVNVVIWRTLLGACSFHGNVEMGARVTRKILEMEKKYGGDYVLLSNIFA 441
Query: 426 GVGRFGDAERLRRVMDERNAFKV 448
GVGRF D ER+RR+MDERNA K
Sbjct: 442 GVGRFWDVERVRRLMDERNASKA 464
>gi|224123708|ref|XP_002319146.1| predicted protein [Populus trichocarpa]
gi|222857522|gb|EEE95069.1| predicted protein [Populus trichocarpa]
Length = 337
Score = 542 bits (1397), Expect = e-151, Method: Compositional matrix adjust.
Identities = 260/337 (77%), Positives = 292/337 (86%)
Query: 118 MYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGI 177
MY+S G L D+ LFDEMP+RN+VTWNVMITGLVKWG+LEFA SLF+EMP +NVVSWTGI
Sbjct: 1 MYLSSGVLGDAMILFDEMPKRNVVTWNVMITGLVKWGKLEFASSLFDEMPEKNVVSWTGI 60
Query: 178 IDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRG 237
IDGY R N+ +E L+LFR+MV CE +P+EITILA+LPAI G++KSC LIHGY EKRG
Sbjct: 61 IDGYIRNNKYSEGLSLFRRMVVCEGIKPTEITILAILPAISNMGELKSCSLIHGYAEKRG 120
Query: 238 FTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVE 297
F AFDIRV N +ID Y+KCGCI SA K FEDISVERKNLVSWTSIISGFAMHGM KEAVE
Sbjct: 121 FNAFDIRVANSIIDCYSKCGCIASAFKFFEDISVERKNLVSWTSIISGFAMHGMWKEAVE 180
Query: 298 NFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDML 357
F RM+K GLKPNRVTFLSVLNACSHGGLV+EGL F KMV E VLPDIKHYGC++DML
Sbjct: 181 YFERMEKAGLKPNRVTFLSVLNACSHGGLVDEGLRCFYKMVNEHGVLPDIKHYGCVVDML 240
Query: 358 GRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDY 417
GR GRLE+AE AL IPSEI +VV+WRTLLGACSFHGNVEMGERVTRKI+EMERGYGGDY
Sbjct: 241 GRTGRLEEAENMALEIPSEIVNVVIWRTLLGACSFHGNVEMGERVTRKIMEMERGYGGDY 300
Query: 418 VLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
VLMYNI AG GR+ DAERLR++M++RNAFK+PG SLV
Sbjct: 301 VLMYNIFAGAGRYEDAERLRKLMNKRNAFKLPGNSLV 337
>gi|449459636|ref|XP_004147552.1| PREDICTED: pentatricopeptide repeat-containing protein At1g09220,
mitochondrial-like [Cucumis sativus]
gi|449484988|ref|XP_004157038.1| PREDICTED: pentatricopeptide repeat-containing protein At1g09220,
mitochondrial-like [Cucumis sativus]
Length = 495
Score = 541 bits (1394), Expect = e-151, Method: Compositional matrix adjust.
Identities = 268/450 (59%), Positives = 329/450 (73%), Gaps = 19/450 (4%)
Query: 9 TPNNITTQIHSHLLTTNSLLHHSQLF----NTLLHFYSLAESPQKAFLLYKQLQQIYTHS 64
T + T QI S ++T+ LL+ + F NTLLH Y L Y+ L+Q
Sbjct: 61 TTHKATQQIRSFIITSGLLLNATANFILLCNTLLHCYPL----------YQPLRQF---- 106
Query: 65 HSPLPPLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGF 124
+PP +D+F YSFL+ +CA L G QLHA+ K+GF SHVYV TA++ MY + GF
Sbjct: 107 -PRIPPSYDTFAYSFLLHSCADLELIGPGFQLHALTFKLGFPSHVYVQTAVLRMYAASGF 165
Query: 125 LKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRM 184
L D+ K+FDEMP+R+ VTWNV+ITGLVK+GEL+ AR +F++MP R VVSWT IIDGYTR+
Sbjct: 166 LLDAMKVFDEMPDRSSVTWNVLITGLVKFGELKRARDVFDQMPMRTVVSWTAIIDGYTRL 225
Query: 185 NRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIR 244
NR EA LF +MVA EP+E+T+L + PAI G +K CQ +H Y EK+GF D+R
Sbjct: 226 NRHEEAAGLFWRMVAHFGMEPNEVTLLTIFPAISNLGALKLCQSVHAYAEKKGFKVSDVR 285
Query: 245 VLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQK 304
+ N LID YAKCGCI SASK+FE++S E KNLVSWTSIISGF MHGMGKEA+E+F M+K
Sbjct: 286 IANSLIDCYAKCGCINSASKVFEEMSAEIKNLVSWTSIISGFTMHGMGKEAMESFEIMEK 345
Query: 305 VGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLE 364
G +PNRVTFLS+++ACSHGGLVEEGL FF+KMV E ++ PDI HYG LIDMLGRAGR+E
Sbjct: 346 EGHEPNRVTFLSIVSACSHGGLVEEGLEFFEKMVAEYQIKPDIMHYGSLIDMLGRAGRIE 405
Query: 365 QAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNIL 424
+AEK AL IP EI VV+WRTLLGACSFHGNV M ERVT++IL ME YGGDYVLM NI
Sbjct: 406 EAEKIALEIPKEIASVVIWRTLLGACSFHGNVSMAERVTQRILNMEGAYGGDYVLMSNIF 465
Query: 425 AGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
A G++GDAER RR+MD K+PG SLV
Sbjct: 466 AAAGKYGDAERWRRLMDSSKFSKIPGQSLV 495
>gi|356506146|ref|XP_003521848.1| PREDICTED: pentatricopeptide repeat-containing protein At1g09220,
mitochondrial-like [Glycine max]
Length = 503
Score = 535 bits (1379), Expect = e-149, Method: Compositional matrix adjust.
Identities = 259/447 (57%), Positives = 335/447 (74%), Gaps = 12/447 (2%)
Query: 16 QIHSHLLTTN---SLLHHSQ----LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPL 68
Q+HSH++T+ + H++ LFN ++ YS P +A + Q H H+ L
Sbjct: 61 QVHSHIITSGLFYNPFHNTLTCLLLFNNVIRCYSFGPYPHEALHFFTYTQ----HCHTFL 116
Query: 69 P-PLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKD 127
P D+F+++FL A ++ + GTQLHA++ KVGFQ HVYV T L+ MY S G L +
Sbjct: 117 TYPSLDTFSFAFLCHASANPNYTHFGTQLHALVFKVGFQFHVYVKTGLLQMYSSSGLLVE 176
Query: 128 SSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRS 187
++++F EM RNLV+WNV ITGL+KWGE+E A S+F +MP R+VVSWT +IDGYTR N+
Sbjct: 177 AAQVFYEMQHRNLVSWNVFITGLIKWGEVELACSVFNQMPARSVVSWTLVIDGYTRRNQP 236
Query: 188 NEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLN 247
+AL LFRKM+ + EP+E+T+L + PAI G +K CQ +H Y EKRGF AFD+R+ N
Sbjct: 237 IKALTLFRKMIEVDGIEPTEVTLLTIFPAIANIGCIKICQSVHVYVEKRGFNAFDVRITN 296
Query: 248 CLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGL 307
L+D YAKCGCI S S+ F++I +R+NLVSWTS ISGFAM+GMG+EA+E+F M+K GL
Sbjct: 297 ALLDLYAKCGCIASMSRFFQEIPDQRRNLVSWTSTISGFAMNGMGREALESFESMEKTGL 356
Query: 308 KPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAE 367
+PN VTFL VL+ACSHGGLVEEG+NFF KMV++ ++PDIKHYGC+IDMLGRAGRLE+AE
Sbjct: 357 RPNHVTFLGVLSACSHGGLVEEGINFFVKMVKDWCLVPDIKHYGCVIDMLGRAGRLEEAE 416
Query: 368 KTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGV 427
K AL +P E+ + V+WRTLLGACS H NVE+G+RVT KILEMERG+GGDYVLM NIL GV
Sbjct: 417 KVALQVPHEVANAVMWRTLLGACSVHNNVEIGQRVTNKILEMERGHGGDYVLMSNILVGV 476
Query: 428 GRFGDAERLRRVMDERNAFKVPGCSLV 454
GRF DAERLR V+D+R AFK+PG S V
Sbjct: 477 GRFKDAERLREVIDKRIAFKLPGYSFV 503
>gi|255568986|ref|XP_002525463.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223535276|gb|EEF36953.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 337
Score = 533 bits (1374), Expect = e-149, Method: Compositional matrix adjust.
Identities = 255/337 (75%), Positives = 289/337 (85%)
Query: 118 MYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGI 177
MY++ GFL ++ FDEMPE+N VTWNVMITGLVKWG+LEFARS F++MP +NVVSWTGI
Sbjct: 1 MYLASGFLGNALLAFDEMPEKNSVTWNVMITGLVKWGKLEFARSFFDDMPEKNVVSWTGI 60
Query: 178 IDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRG 237
IDGY RMNR E LALFR+MV+ E PSEITILA+LPAI G++++C LIH EKRG
Sbjct: 61 IDGYVRMNRITEGLALFRRMVSFEGIAPSEITILAILPAISGIGELQNCGLIHCLVEKRG 120
Query: 238 FTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVE 297
F + DIRV N +IDTYAKCGCI SAS+ FE+ISVERKNLVSWTSIISGFAMHGMG+EAV+
Sbjct: 121 FNSSDIRVTNSIIDTYAKCGCIVSASRFFEEISVERKNLVSWTSIISGFAMHGMGQEAVK 180
Query: 298 NFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDML 357
F M++ GLKPNRVTFLSVLNACSHGGLV EG FF+KMV + +LPDIKHYGCL+DML
Sbjct: 181 RFENMERTGLKPNRVTFLSVLNACSHGGLVAEGHEFFEKMVNQYSILPDIKHYGCLVDML 240
Query: 358 GRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDY 417
GR GRLE+AEK ALGIPSEI + V+WRTLLGACSFHGN E+GERVTRKI+EMERGYGGDY
Sbjct: 241 GRTGRLEEAEKLALGIPSEIVNAVIWRTLLGACSFHGNSEIGERVTRKIMEMERGYGGDY 300
Query: 418 VLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
VLMYNI AGVGRF DAERLR +MDERNAFKVPG SLV
Sbjct: 301 VLMYNIFAGVGRFEDAERLRVLMDERNAFKVPGHSLV 337
>gi|357469567|ref|XP_003605068.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355506123|gb|AES87265.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 494
Score = 528 bits (1361), Expect = e-147, Method: Compositional matrix adjust.
Identities = 256/462 (55%), Positives = 337/462 (72%), Gaps = 16/462 (3%)
Query: 3 ILQNSQTPN-NITTQIHSHLLTTNSLLHHSQ---------LFNTLLHFYSLAESPQKAFL 52
+L N+ +P+ + Q+HS ++T+ SL HH LFN L+ YSL+ P ++
Sbjct: 39 LLLNNPSPHYHFLQQLHSQIITS-SLFHHYPFHNNLTSLLLFNNLIRSYSLSLFPHESLK 97
Query: 53 LYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVN 112
+ THS S DSFT +FL CA L + G LH ++ K+GF++HV+V
Sbjct: 98 FFTHTLNNLTHSLS-----LDSFTLTFLAHACANLDTTHFGFHLHCIVCKMGFENHVFVQ 152
Query: 113 TALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVV 172
T L++MY + GFL D++++F EMP+RN VTWNV I+GL+KWG+LEFARS+F+ M R+VV
Sbjct: 153 TGLLHMYSNWGFLVDAAQVFGEMPDRNTVTWNVFISGLIKWGQLEFARSVFDRMVVRSVV 212
Query: 173 SWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGY 232
SWT +IDGYTRMN+ +ALALFRKM+ + EP+E+T+L V PAI G+VK C+ +HGY
Sbjct: 213 SWTLVIDGYTRMNKPLKALALFRKMIEVDGIEPNEVTLLTVFPAIAHLGNVKMCESVHGY 272
Query: 233 GEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMG 292
EKRGF A DIR++N LID YAKCGCI SAS LF ++ R+N VSW S++SG+A GM
Sbjct: 273 VEKRGFNAVDIRIVNALIDLYAKCGCIESASGLFSEMPDWRRNSVSWNSVMSGYATFGMV 332
Query: 293 KEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGC 352
+EAV+ F +M+K G++PN V FLS+L+ACSH GLVEEGL FF KMV + ++PDIKHYGC
Sbjct: 333 REAVDTFEKMEKAGVRPNHVAFLSILSACSHSGLVEEGLEFFGKMVNDYGLVPDIKHYGC 392
Query: 353 LIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERG 412
+IDMLGRAGRL +AEK AL +P E + V+WRTLLGACS H NVE+G+RVT+KILEME+G
Sbjct: 393 VIDMLGRAGRLGEAEKVALEVPHEAANDVIWRTLLGACSVHDNVEIGKRVTKKILEMEKG 452
Query: 413 YGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
+GGDYVLM NI A VGRF D ERLR ++D+RN FK+PG S+V
Sbjct: 453 HGGDYVLMSNIFASVGRFKDVERLREMIDKRNVFKLPGYSIV 494
>gi|356554965|ref|XP_003545811.1| PREDICTED: pentatricopeptide repeat-containing protein At1g09220,
mitochondrial-like [Glycine max]
Length = 517
Score = 526 bits (1356), Expect = e-147, Method: Compositional matrix adjust.
Identities = 256/447 (57%), Positives = 333/447 (74%), Gaps = 12/447 (2%)
Query: 16 QIHSHLLTTN---SLLHHSQ----LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPL 68
Q+HSH++T+ + H++ LFN ++ YS P +A + Q H H L
Sbjct: 75 QVHSHIITSGLFYNPFHNTLTCLLLFNNVIRCYSFGPYPHEALHFFTYTQ----HCHIFL 130
Query: 69 P-PLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKD 127
P D+F+++FL A ++ + GTQLHA+I KVGFQ VYV T L+ MY S G L +
Sbjct: 131 TYPSLDTFSFAFLCHASANPNYTHFGTQLHALIFKVGFQFQVYVQTRLLQMYSSSGLLVE 190
Query: 128 SSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRS 187
++++F EM RNLV+WNV ITGL+K GE+E A S+F +MP R+VVSWT +IDGYTR N+
Sbjct: 191 AAQVFYEMQHRNLVSWNVFITGLIKLGEVELACSVFNQMPARSVVSWTLVIDGYTRRNQP 250
Query: 188 NEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLN 247
+AL LFRKM+ + EP+E+T+L + PAI G +K CQ +HGY EKRGF AFD+R+ N
Sbjct: 251 IKALTLFRKMIEVDGIEPTEVTLLTIFPAIANIGCIKICQSVHGYVEKRGFNAFDVRITN 310
Query: 248 CLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGL 307
L+D YAKCGCI S S+ F++I +R+NLVSWTS ISGFAM+GMG+EA+E+F M+K GL
Sbjct: 311 ALLDLYAKCGCIASVSRFFQEIPDQRRNLVSWTSTISGFAMNGMGREALESFESMEKAGL 370
Query: 308 KPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAE 367
+PN VTFL VL+ACSHGGLVEEG+NFF KMV++ ++PDIKHYGC+IDMLGRAGRLE+AE
Sbjct: 371 RPNHVTFLGVLSACSHGGLVEEGINFFVKMVKDWCLVPDIKHYGCVIDMLGRAGRLEEAE 430
Query: 368 KTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGV 427
K AL +P E+ + V+WRTLLGAC+ H NVE+G+RVT KILEMERG+GGDYVLM NIL GV
Sbjct: 431 KIALQVPHEVANAVMWRTLLGACNVHNNVEIGQRVTNKILEMERGHGGDYVLMSNILVGV 490
Query: 428 GRFGDAERLRRVMDERNAFKVPGCSLV 454
GRF DAE+LR ++D+R AFK+PG S V
Sbjct: 491 GRFKDAEKLREMIDKRIAFKLPGYSFV 517
>gi|147860607|emb|CAN79717.1| hypothetical protein VITISV_027522 [Vitis vinifera]
Length = 610
Score = 516 bits (1328), Expect = e-143, Method: Compositional matrix adjust.
Identities = 260/427 (60%), Positives = 310/427 (72%), Gaps = 8/427 (1%)
Query: 9 TPNNITTQIHSHLLTTNSLLHHSQL--FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHS 66
T + Q+HSHL+TT + H + +N LL YSL PQ+AFLL++ L+ H
Sbjct: 27 TRRSAMQQLHSHLITTGAHSHCMDVTSWNVLLRHYSLGIFPQEAFLLFRHLRL-----HH 81
Query: 67 PLPPLFDSFTYSFLI-RTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFL 125
PPL + + CA L H G QLHA+ K+GF+ HVYV+T L+N+Y + G
Sbjct: 82 VYPPLSFDSFSFSFLLKACANLQHREGGLQLHALTLKLGFEFHVYVHTVLLNVYAACGAF 141
Query: 126 KDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMN 185
++ ++FDEMP RN VTWNV ITGL KWGEL A SL +EMP VVSWT IIDGYTRMN
Sbjct: 142 LEAKQVFDEMPVRNSVTWNVFITGLAKWGELHLACSLLDEMPRPTVVSWTTIIDGYTRMN 201
Query: 186 RSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRV 245
+ +ALALF M E +P+EIT+LA+ PAI G ++ CQLIH YGEK G A DIR+
Sbjct: 202 QPKQALALFLTMFLDEGIKPTEITLLAIFPAISNLGALEICQLIHTYGEKSGLNASDIRI 261
Query: 246 LNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKV 305
L+DTYAKCGCI SAS +F +I+ + +NLVSWTSIIS FAMHGM KEA+ENF RMQK
Sbjct: 262 RTSLLDTYAKCGCIESASGVFGEIAAKGRNLVSWTSIISAFAMHGMAKEALENFERMQKE 321
Query: 306 GLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQ 365
LKPNR+TFLSVLNACSHGGLVEEGL F KMV EC++ PD+KHYGCLIDMLGRAGRL++
Sbjct: 322 CLKPNRITFLSVLNACSHGGLVEEGLKLFTKMVNECQISPDVKHYGCLIDMLGRAGRLDE 381
Query: 366 AEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILA 425
AEK AL IP + +VV+WRTLLGACSFHGNVEMG RVTRKILEMER YGGDYVL+ NI A
Sbjct: 382 AEKMALEIPDYVVNVVIWRTLLGACSFHGNVEMGARVTRKILEMERKYGGDYVLLSNIFA 441
Query: 426 GVGRFGD 432
GVGR D
Sbjct: 442 GVGRIKD 448
>gi|302144057|emb|CBI23162.3| unnamed protein product [Vitis vinifera]
Length = 627
Score = 512 bits (1318), Expect = e-142, Method: Compositional matrix adjust.
Identities = 258/423 (60%), Positives = 308/423 (72%), Gaps = 8/423 (1%)
Query: 9 TPNNITTQIHSHLLTTNSLLHHSQL--FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHS 66
T + Q+HSHL+TT + H + +N LL YSL PQ+AFLL++ L+ H
Sbjct: 27 TRRSAMQQLHSHLITTGAHSHCMDVTSWNVLLRHYSLGIFPQEAFLLFRHLRL-----HH 81
Query: 67 PLPPLFDSFTYSFLI-RTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFL 125
PPL + + CA L H G QLHA+ K+GF+ HVYV+T L+N+Y + G
Sbjct: 82 VYPPLSFDSFSFSFLLKACANLQHREGGLQLHALTLKLGFEFHVYVHTVLLNVYAACGAF 141
Query: 126 KDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMN 185
++ ++FDEMP RN VTWNV ITGL KWGEL A SL +EMP VVSWT IIDGYTRMN
Sbjct: 142 LEAKQVFDEMPVRNSVTWNVFITGLAKWGELHLACSLLDEMPRPTVVSWTTIIDGYTRMN 201
Query: 186 RSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRV 245
+ +ALALF M E +P+EIT+LA+ PAI G ++ CQLIH YGEK G A DIR+
Sbjct: 202 QPKQALALFLTMFLDEGIKPTEITLLAIFPAISNLGALEICQLIHTYGEKSGLNASDIRI 261
Query: 246 LNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKV 305
L+DTYAKCGCI SAS +F +I+ + +NLVSWTSIIS FAMHGM KEA+ENF RMQK
Sbjct: 262 RTSLLDTYAKCGCIESASGVFGEIAAKGRNLVSWTSIISAFAMHGMAKEALENFERMQKE 321
Query: 306 GLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQ 365
LKPNR+TFLSVLNACSHGGLVEEGL F KMV EC++ PD+KHYGCLIDMLGRAGRL++
Sbjct: 322 CLKPNRITFLSVLNACSHGGLVEEGLKLFTKMVNECQISPDVKHYGCLIDMLGRAGRLDE 381
Query: 366 AEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILA 425
AEK AL IP + +VV+WRTLLGACSFHGNVEMG RVTRKILEMER YGGDYVL+ NI A
Sbjct: 382 AEKMALEIPDYVVNVVIWRTLLGACSFHGNVEMGARVTRKILEMERKYGGDYVLLSNIFA 441
Query: 426 GVG 428
GVG
Sbjct: 442 GVG 444
>gi|334182414|ref|NP_172393.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75116771|sp|Q680Z7.1|PPR24_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g09220, mitochondrial; Flags: Precursor
gi|51969004|dbj|BAD43194.1| hypothetical protein [Arabidopsis thaliana]
gi|51969582|dbj|BAD43483.1| hypothetical protein [Arabidopsis thaliana]
gi|51969876|dbj|BAD43630.1| hypothetical protein [Arabidopsis thaliana]
gi|62318861|dbj|BAD93927.1| hypothetical protein [Arabidopsis thaliana]
gi|332190294|gb|AEE28415.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 504
Score = 506 bits (1302), Expect = e-140, Method: Compositional matrix adjust.
Identities = 259/464 (55%), Positives = 322/464 (69%), Gaps = 14/464 (3%)
Query: 3 ILQNSQTPNNITTQIHSHLLTTNSLLHHSQ-------LFNTLLHFYSLAESPQKAFLLYK 55
++Q ++ I Q+HSH T+ LL H + LFN LL YSL E+P A+ LY
Sbjct: 42 LMQKYESNLKIIHQLHSHFTTSGFLLLHQKQNSGKLFLFNPLLRCYSLGETPLHAYFLYD 101
Query: 56 QLQQIY--THSHSPLPPLFDSFTYSFLIRTCATLSHPNLGTQLHAVIS--KVGFQSHVYV 111
QLQ+++ + + LPP FDSFTY FL++ + P+L + K+GF+SHVYV
Sbjct: 102 QLQRLHFLSDHNKSLPP-FDSFTYLFLLKASSNPRFPSLLLGIGLHGLTLKLGFESHVYV 160
Query: 112 NTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNV 171
TALV MY+ G + D+ K+FDEMPERN VTWNVMITGL G+ E A E+MP R V
Sbjct: 161 QTALVGMYLVGGNMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALCFLEKMPNRTV 220
Query: 172 VSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHG 231
VSWT IIDGY R+++ EA+ LF +MVAC+ +P+EITILA+LPA+W GD+K C +H
Sbjct: 221 VSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLGDLKMCGSVHA 280
Query: 232 YGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGM 291
Y KRGF DIRV N LID YAKCGCI SA K F +I RKNLVSWT++IS FA+HGM
Sbjct: 281 YVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTTMISAFAIHGM 340
Query: 292 GKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEG-LNFFDKMVEECEVLPDIKHY 350
GKEAV F M+++GLKPNRVT +SVLNACSHGGL EE L FF+ MV E ++ PD+KHY
Sbjct: 341 GKEAVSMFKDMERLGLKPNRVTMISVLNACSHGGLAEEEFLEFFNTMVNEYKITPDVKHY 400
Query: 351 GCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEME 410
GCL+DML R GRLE+AEK AL IP E VVWR LLGACS + + E+ ERVTRK++E+E
Sbjct: 401 GCLVDMLRRKGRLEEAEKIALEIPIE-EKAVVWRMLLGACSVYDDAELAERVTRKLMELE 459
Query: 411 RGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
R +GGDYVLM NI G GRF DA+R R+ MD R K+PG S V
Sbjct: 460 RSHGGDYVLMSNIFCGTGRFLDAQRFRKQMDVRGVAKLPGHSQV 503
>gi|359475755|ref|XP_003631749.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g09220, mitochondrial-like [Vitis vinifera]
Length = 509
Score = 496 bits (1278), Expect = e-138, Method: Compositional matrix adjust.
Identities = 241/374 (64%), Positives = 289/374 (77%), Gaps = 5/374 (1%)
Query: 82 RTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLV 141
+ CA L H G QLHA+ K GF+ HVY++T L+N+Y G L ++ ++ DEMP RN V
Sbjct: 140 KACAYLQHRKGGLQLHALTLKAGFEFHVYLHTVLLNVYAVCGALLEAKQVLDEMPVRNSV 199
Query: 142 TWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACE 201
TWNV+ITGL KWGEL ARSLF+EMP VVSWT IIDGYTRMN+ +ALALFR M E
Sbjct: 200 TWNVLITGLAKWGELHLARSLFDEMPMPTVVSWTTIIDGYTRMNQPKQALALFRTMFIDE 259
Query: 202 YTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFS 261
+P+EI +LA+ PAI G ++ CQL+H YGEK G A DIR+ N L+DTYAKCGC+ S
Sbjct: 260 GIKPTEIALLAIFPAISNLGALELCQLVHMYGEKSGLNASDIRIRNSLLDTYAKCGCMES 319
Query: 262 ASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNAC 321
++F +I+ + +NLVSWTS+IS FAMHGM KEA+E + K LKPNR+TFLSVLNAC
Sbjct: 320 IXRVFGEIAAKSRNLVSWTSVISAFAMHGMAKEALE----ILKECLKPNRITFLSVLNAC 375
Query: 322 SHGGLVEEG-LNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDV 380
SHGGLVEEG L FF KMV E ++ PD+KHYG LIDMLGRAGRL++AEK AL P ++ +V
Sbjct: 376 SHGGLVEEGRLKFFAKMVNEYQMSPDVKHYGGLIDMLGRAGRLDEAEKMALEFPDDVVNV 435
Query: 381 VVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVM 440
V+WRTLLGACSFHGNVEMG RVTRKILEMER YGGDYVL+ NI AGVGRF D ER+RR+M
Sbjct: 436 VIWRTLLGACSFHGNVEMGARVTRKILEMERKYGGDYVLLSNIFAGVGRFWDVERVRRLM 495
Query: 441 DERNAFKVPGCSLV 454
DERNA K+PG SLV
Sbjct: 496 DERNASKLPGLSLV 509
>gi|357131180|ref|XP_003567218.1| PREDICTED: pentatricopeptide repeat-containing protein At1g09220,
mitochondrial-like [Brachypodium distachyon]
Length = 474
Score = 452 bits (1164), Expect = e-124, Method: Compositional matrix adjust.
Identities = 234/452 (51%), Positives = 303/452 (67%), Gaps = 13/452 (2%)
Query: 3 ILQNSQTPNNITTQIHSHLLTTNSLLHHSQLFNTLLHFYSLAESPQKAFLLYKQLQQIYT 62
+L Q QIHS L+ ++ LL YS PQ+A L++ +
Sbjct: 32 LLLKHQAKRRQLLQIHSQLVAHQVFDRRPTPWHALLKAYSHGPFPQEALNLFRDAHRNMA 91
Query: 63 HSHSPLPPLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSL 122
D++ + F +R CA L+ P G QLH ++ + GF+ H YV+T+L+N YV
Sbjct: 92 D---------DTYAFMFSLRACAGLAWPWTGAQLHGLVIRKGFEFHAYVHTSLINTYVVC 142
Query: 123 GFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYT 182
G L D+ FDEMP +N+V+WNVMITG GE+E+AR LFE MP RNVVSWTG+IDGYT
Sbjct: 143 GCLVDARMAFDEMPVKNVVSWNVMITGFAGRGEIEYARLLFERMPSRNVVSWTGLIDGYT 202
Query: 183 RMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFD 242
R S EA+AL R+M+A E P+EIT+LAV+PAI G + + +HGY EK G D
Sbjct: 203 RSCHSVEAVALLRRMMA-EGISPTEITVLAVVPAISDIGRILMGETLHGYCEKNGLV-LD 260
Query: 243 IRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRM 302
IRV N LID YAK G I S+ K+F + + R+NLVSWTSIISGFAMHG+ EAVE F M
Sbjct: 261 IRVGNSLIDLYAKIGSIQSSLKVFHGM-LNRRNLVSWTSIISGFAMHGLSTEAVELFAEM 319
Query: 303 QKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGR 362
++ G++PNRVTFLSVLNACSHGGLVE+G+ FF MV E + P+IKH+GC+IDMLGRAGR
Sbjct: 320 RRSGIRPNRVTFLSVLNACSHGGLVEQGVEFFKSMVYEYNINPEIKHFGCIIDMLGRAGR 379
Query: 363 LEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYN 422
L +AE+ G+P E+ +VWRTLL CS +G VEMG+R +KIL ER GGD+V++ N
Sbjct: 380 LCEAEQVIGGLPMEVNS-IVWRTLLACCSKYGEVEMGKRAMKKILHTERESGGDFVVVSN 438
Query: 423 ILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
+L +GRF DAER R+++DERNA KVPG +LV
Sbjct: 439 MLTELGRFSDAERSRKLLDERNAVKVPGLALV 470
>gi|125572419|gb|EAZ13934.1| hypothetical protein OsJ_03861 [Oryza sativa Japonica Group]
Length = 1031
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 217/432 (50%), Positives = 299/432 (69%), Gaps = 13/432 (3%)
Query: 16 QIHSHLLTTNSLLHHSQLFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSF 75
QIHS L+ ++ LL YS PQ A L++ H+ D++
Sbjct: 40 QIHSQLIAHQVFDRRPTPWHALLKAYSHGPHPQDALQLFR---------HARWHAADDTY 90
Query: 76 TYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEM 135
++F ++ CA L P QLH ++ + GF+ YV+TALVN+Y+ G L DS F+EM
Sbjct: 91 AFTFALKACAGLGWPRCCMQLHGLVVRKGFEFQTYVHTALVNVYILCGCLADSRMAFEEM 150
Query: 136 PERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFR 195
P +N V+WNV+ITG WGE+E+AR LFE MPCRNVVSW+G+IDGYTR R EA+ALFR
Sbjct: 151 PVKNAVSWNVVITGFAGWGEVEYARLLFERMPCRNVVSWSGMIDGYTRACRPVEAVALFR 210
Query: 196 KMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAK 255
+M+A E PSEIT+LAV+PA+ G + + +HGY EK G +D+RV N LID YAK
Sbjct: 211 RMMA-EGISPSEITVLAVVPALSNVGKILIGEALHGYCEKEGLV-WDVRVGNSLIDLYAK 268
Query: 256 CGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFL 315
G I ++ ++F+++ ++R+NLVSWTSIISGFAMHG+ +AVE F M++ G++PNR+TFL
Sbjct: 269 IGSIQNSLRVFDEM-LDRRNLVSWTSIISGFAMHGLSVKAVELFADMRRAGIRPNRITFL 327
Query: 316 SVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPS 375
SVL+ACSHGGLVE+G+ FF M+ E + PD+KH+GC+IDMLGRAGRL +AE+ P
Sbjct: 328 SVLHACSHGGLVEQGVAFFKSMIYEYNINPDVKHFGCIIDMLGRAGRLREAEQIIRDFPV 387
Query: 376 EITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAER 435
E+ + VWRTLLG CS +G VEMGER +KIL +ER +GGD+V++ N+L + RF DAE
Sbjct: 388 EV-NATVWRTLLGCCSKYGEVEMGERTMKKILALEREFGGDFVVLSNMLTELRRFSDAEI 446
Query: 436 LRRVMDERNAFK 447
+R+++D+RN+ K
Sbjct: 447 VRKLVDQRNSVK 458
Score = 249 bits (636), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 144/421 (34%), Positives = 233/421 (55%), Gaps = 13/421 (3%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+N+L+ YS + L+K +Q + D T ++ C L ++
Sbjct: 621 WNSLICGYSQCNRFKDILALFKLMQNEGVKA--------DKVTMIKVVSACTRLGDYSMA 672
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
+ I + VY+ LV+ + G L+ + K+F M RN+VT N MI K
Sbjct: 673 DYMVRYIEDYCIEVDVYLGNTLVDYFGRRGQLQSAEKVFFNMKVRNIVTMNAMIAAYAKG 732
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
++ AR +F+++P ++++SW+ +I GY++ N ++AL +FR+M + +P I I +V
Sbjct: 733 QDIVSARKIFDQIPKKDLISWSSMISGYSQANHFSDALEIFRQMQRAK-VKPDAIVIASV 791
Query: 214 LPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVER 273
+ + G + + +H Y + A D + N LID Y KCG A ++F+++ +
Sbjct: 792 VSSCAHLGALDLGKWVHEYVRRNNIKA-DTIMENSLIDMYMKCGSAKEALQVFKEM--KE 848
Query: 274 KNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNF 333
K+ +SW SII G A +G KE++ F M G +PN VTFL VL AC++ LVEEGL+
Sbjct: 849 KDTLSWNSIIIGLANNGFEKESLNLFQAMLTEGFRPNGVTFLGVLIACANAKLVEEGLDH 908
Query: 334 FDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFH 393
F+ M + P +KHYGC++D+LGRAG+LE+A + +P + D VVWR LLG+C+ H
Sbjct: 909 FESMKRLYSLEPQMKHYGCVVDLLGRAGQLEKALRFITEMPID-PDPVVWRILLGSCNTH 967
Query: 394 GNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSL 453
G+V + E VT+K+ E+E G+Y L+ N A R+ +A +R+ M + + K PGCS
Sbjct: 968 GDVAIAEIVTKKLNELEPSNSGNYTLLSNAYASAHRWSEAMNVRQCMADTDVRKSPGCSA 1027
Query: 454 V 454
V
Sbjct: 1028 V 1028
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 96/362 (26%), Positives = 187/362 (51%), Gaps = 29/362 (8%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNL 92
L+N L+ + +++P A YK+ Q + P D+ T+ F+++ CA ++ N
Sbjct: 519 LWNILIRGLAQSDAPADAIAFYKKAQG------GGMVP--DNLTFPFILKACARINALNE 570
Query: 93 GTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVK 152
G Q+H I+K+G S ++V+ +L+++Y + G L + +FDEM +++V+WN +I G +
Sbjct: 571 GEQMHNHITKLGLLSDIFVSNSLIHLYAACGNLCYARSVFDEMVVKDVVSWNSLICGYSQ 630
Query: 153 WGELEFARSLFEEMPCRNV----VSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEI 208
+ +LF+ M V V+ ++ TR+ + A + R + +Y ++
Sbjct: 631 CNRFKDILALFKLMQNEGVKADKVTMIKVVSACTRLGDYSMADYMVRYIE--DYCIEVDV 688
Query: 209 TILAVLPAIW-QNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFE 267
+ L + + G ++S + + + R +I +N +I YAK I SA K+F+
Sbjct: 689 YLGNTLVDYFGRRGQLQSAEKVFFNMKVR-----NIVTMNAMIAAYAKGQDIVSARKIFD 743
Query: 268 DISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLV 327
I +K+L+SW+S+ISG++ +A+E F +MQ+ +KP+ + SV+++C+H G +
Sbjct: 744 QIP--KKDLISWSSMISGYSQANHFSDALEIFRQMQRAKVKPDAIVIASVVSSCAHLGAL 801
Query: 328 EEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEI--TDVVVWRT 385
+ G + + V + D LIDM + G + K AL + E+ D + W +
Sbjct: 802 DLG-KWVHEYVRRNNIKADTIMENSLIDMYMKCG----SAKEALQVFKEMKEKDTLSWNS 856
Query: 386 LL 387
++
Sbjct: 857 II 858
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/296 (24%), Positives = 133/296 (44%), Gaps = 39/296 (13%)
Query: 95 QLHAVISKVGFQSHVYVNTALVNMYVSLG-FLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
+LHA G + Y + ++ Y L L + K+FD++ WN++I GL +
Sbjct: 471 RLHAYYIVSGLYNCHYAMSKVLRSYAILQPDLVFAHKVFDQIEAPTTFLWNILIRGLAQ- 529
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
+ P +A+A ++K P +T +
Sbjct: 530 ----------SDAPA--------------------DAIAFYKKAQGGGMV-PDNLTFPFI 558
Query: 214 LPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVER 273
L A + + + +H + K G + DI V N LI YA CG + A +F+++ V
Sbjct: 559 LKACARINALNEGEQMHNHITKLGLLS-DIFVSNSLIHLYAACGNLCYARSVFDEMVV-- 615
Query: 274 KNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNF 333
K++VSW S+I G++ K+ + F MQ G+K ++VT + V++AC+ G ++
Sbjct: 616 KDVVSWNSLICGYSQCNRFKDILALFKLMQNEGVKADKVTMIKVVSACTRLGDYSMA-DY 674
Query: 334 FDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGA 389
+ +E+ + D+ L+D GR G+L+ AEK + ++ ++V ++ A
Sbjct: 675 MVRYIEDYCIEVDVYLGNTLVDYFGRRGQLQSAEKVFFNM--KVRNIVTMNAMIAA 728
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 70/330 (21%), Positives = 136/330 (41%), Gaps = 38/330 (11%)
Query: 115 LVNMYVSLGFLKDSSKLFDEMP-ERNLVTWNVMITGLVKWGELEFA-RSLFEEMPCRNVV 172
+++M G L+++ ++ + P E N W ++ K+GE+E R++ + +
Sbjct: 365 IIDMLGRAGRLREAEQIIRDFPVEVNATVWRTLLGCCSKYGEVEMGERTMKKILALEREF 424
Query: 173 SWTGII--DGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIH 230
++ + T + R ++A + RK+V + S I+ +++ + +H
Sbjct: 425 GGDFVVLSNMLTELRRFSDA-EIVRKLVDQRNSVKSFFNIV----------RMEAIKRLH 473
Query: 231 GYGEKRGFTAFDIRVLNC------LIDTYA--KCGCIFSASKLFEDISVERKNLVSWTSI 282
Y G + NC ++ +YA + +F A K+F+ I E W +
Sbjct: 474 AYYIVSG-------LYNCHYAMSKVLRSYAILQPDLVF-AHKVFDQI--EAPTTFLWNIL 523
Query: 283 ISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECE 342
I G A +A+ + + Q G+ P+ +TF +L AC+ + EG + + +
Sbjct: 524 IRGLAQSDAPADAIAFYKKAQGGGMVPDNLTFPFILKACARINALNEGEQMHNH-ITKLG 582
Query: 343 VLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERV 402
+L DI LI + G L A + + DVV W +L+ C + + +
Sbjct: 583 LLSDIFVSNSLIHLYAACGNLCYARSVFDEMV--VKDVVSWNSLI--CGYSQCNRFKDIL 638
Query: 403 TRKILEMERGYGGDYVLMYNILAGVGRFGD 432
L G D V M +++ R GD
Sbjct: 639 ALFKLMQNEGVKADKVTMIKVVSACTRLGD 668
>gi|3249111|gb|AAC24094.1| T12M4.7 [Arabidopsis thaliana]
Length = 412
Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust.
Identities = 219/382 (57%), Positives = 265/382 (69%), Gaps = 2/382 (0%)
Query: 74 SFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFD 133
+F YS L L+ P S + + TALV MY+ G + D+ K+FD
Sbjct: 31 NFFYSILCFDAILLAKPLFMLTSSTTNSNDSISCLITIRTALVGMYLVGGNMIDAHKVFD 90
Query: 134 EMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALAL 193
EMPERN VTWNVMITGL G+ E A E+MP R VVSWT IIDGY R+++ EA+ L
Sbjct: 91 EMPERNPVTWNVMITGLTNLGDFEKALCFLEKMPNRTVVSWTTIIDGYARVDKPKEAILL 150
Query: 194 FRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTY 253
F +MVAC+ +P+EITILA+LPA+W GD+K C +H Y KRGF DIRV N LID Y
Sbjct: 151 FSRMVACDAIKPNEITILAILPAVWNLGDLKMCGSVHAYVGKRGFVPCDIRVTNSLIDAY 210
Query: 254 AKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVT 313
AKCGCI SA K F +I RKNLVSWT++IS FA+HGMGKEAV F M+++GLKPNRVT
Sbjct: 211 AKCGCIQSAFKFFIEIPNGRKNLVSWTTMISAFAIHGMGKEAVSMFKDMERLGLKPNRVT 270
Query: 314 FLSVLNACSHGGLVEEG-LNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALG 372
+SVLNACSHGGL EE L FF+ MV E ++ PD+KHYGCL+DML R GRLE+AEK AL
Sbjct: 271 MISVLNACSHGGLAEEEFLEFFNTMVNEYKITPDVKHYGCLVDMLRRKGRLEEAEKIALE 330
Query: 373 IPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGD 432
IP E VVWR LLGACS + + E+ ERVTRK++E+ER +GGDYVLM NI G GRF D
Sbjct: 331 IPIE-EKAVVWRMLLGACSVYDDAELAERVTRKLMELERSHGGDYVLMSNIFCGTGRFLD 389
Query: 433 AERLRRVMDERNAFKVPGCSLV 454
A+R R+ MD R K+PG S V
Sbjct: 390 AQRFRKQMDVRGVAKLPGHSQV 411
>gi|414879990|tpg|DAA57121.1| TPA: putative NAC domain and pentatricopeptide repeat containing
protein [Zea mays]
Length = 1467
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 214/424 (50%), Positives = 297/424 (70%), Gaps = 21/424 (4%)
Query: 36 TLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLF-----------DSFTYSFLIRTC 84
T L + + +P +AFL + Y+H PL L D+F ++F+++ C
Sbjct: 436 TALKVFDQSPAPWRAFL------KAYSHGPFPLEALHLFKHARQHLADDTFVFTFVLKAC 489
Query: 85 ATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWN 144
A L G QLHA++ + GF+ H YV+TAL+N+YV L ++ K+FDEMP +N+V+WN
Sbjct: 490 AGLGWHRAGAQLHALVVQKGFEFHAYVHTALINVYVMSRCLVEARKVFDEMPVKNVVSWN 549
Query: 145 VMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTE 204
VMITG WGE+E+AR LF++MPCRNVVSWTG+IDGYTR EAL L R M+A +
Sbjct: 550 VMITGFAGWGEVEYARLLFDQMPCRNVVSWTGLIDGYTRACLYAEALTLLRHMMAGGIS- 608
Query: 205 PSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASK 264
PSEIT+LAV+PAI G + ++++GY EK+G + D RV N LID YAK G + ++ K
Sbjct: 609 PSEITVLAVIPAISNLGGILMGEMLNGYCEKKGIMS-DARVGNSLIDLYAKIGSVQNSLK 667
Query: 265 LFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHG 324
+F+++ ++R+NLVSWTSIISGFAMHG+ EA+E F M++ G+KPNR+TFLSV+NACSHG
Sbjct: 668 VFDEM-LDRRNLVSWTSIISGFAMHGLSVEALELFAEMRRAGIKPNRITFLSVINACSHG 726
Query: 325 GLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWR 384
GLVE+GL FF MV E + P+IKH+GC+IDMLGRAGRL +AE+ G+P E+ +V VWR
Sbjct: 727 GLVEQGLAFFKSMVYEYNIDPEIKHFGCIIDMLGRAGRLCEAEQIIEGLPMEV-NVTVWR 785
Query: 385 TLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERN 444
LLG CS +G V MGER + I ++ER GGD+ ++ N+L +GRF DAE+ R+++D+R
Sbjct: 786 ILLGCCSKYGEVAMGERAIKMISDLERESGGDFAVLSNVLTELGRFSDAEQARKLLDQRK 845
Query: 445 AFKV 448
K+
Sbjct: 846 IVKL 849
Score = 251 bits (641), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 144/405 (35%), Positives = 226/405 (55%), Gaps = 13/405 (3%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+N+L+ YS ++ L+K +Q + D T +I C L ++
Sbjct: 1009 WNSLIGGYSQHNRLKEVLTLFKLMQAEEVQA--------DKVTMVKVISACTHLGDWSMA 1060
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
+ I + VY+ L++ Y +G L+ + K+F +M ++N VT N MIT K
Sbjct: 1061 DCMVRYIEHNHIEVDVYLGNTLIDYYCRIGQLQSAEKVFSQMKDKNTVTLNAMITAYAKG 1120
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
G L A+ +F+++P ++++SW+ +I Y++ + +++L LFR+M + +P + I +V
Sbjct: 1121 GNLVSAKKIFDQIPNKDLISWSSMICAYSQASHFSDSLELFRQMQRAK-VKPDAVVIASV 1179
Query: 214 LPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVER 273
L A G + + IH Y + A D + N LID +AKCGC+ A ++F D+ E
Sbjct: 1180 LSACAHLGALDLGKWIHDYVRRNNIKA-DTIMENSLIDMFAKCGCVQEALQVFTDM--EE 1236
Query: 274 KNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNF 333
K+ +SW SII G A +G EA++ F M G +PN VTFL VL AC++ LVEEGL+
Sbjct: 1237 KDTLSWNSIILGLANNGFEDEALDIFHSMLTEGPRPNEVTFLGVLIACANRQLVEEGLDH 1296
Query: 334 FDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFH 393
F++M + P +KHYGC++D+L RAG+LE+A +P D VVWR LLGAC H
Sbjct: 1297 FERMKSVHNLEPQMKHYGCVVDILSRAGQLEKAVSFISEMPLA-PDPVVWRILLGACRTH 1355
Query: 394 GNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRR 438
GNV + E T+K+ E++ G D +L+ NI A R+ DA +RR
Sbjct: 1356 GNVAVAEMATKKLSELDPGNSADSMLLSNIYASADRWSDAMNVRR 1400
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 96/359 (26%), Positives = 176/359 (49%), Gaps = 23/359 (6%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNL 92
L+NTLL + +++P+ A + YK+ Q+ + P D+ T+ F+++ CA P
Sbjct: 907 LWNTLLRGLAQSDAPKDAIVFYKKAQE------KGMKP--DNLTFPFVLKACAKTCAPKE 958
Query: 93 GTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVK 152
G Q+H + K+GF ++V+ +L+ +Y + G L + +F+EM +++V+WN +I G +
Sbjct: 959 GEQMHNHVIKLGFLLDIFVSNSLIYLYAACGALACARSVFNEMLVKDVVSWNSLIGGYSQ 1018
Query: 153 WGELEFARSLFEEMPCRNV----VSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEI 208
L+ +LF+ M V V+ +I T + + A + R Y E + I
Sbjct: 1019 HNRLKEVLTLFKLMQAEEVQADKVTMVKVISACTHLGDWSMADCMVR------YIEHNHI 1072
Query: 209 TILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFED 268
+ L + + QL + LN +I YAK G + SA K+F+
Sbjct: 1073 EVDVYLGNTLIDYYCRIGQLQSAEKVFSQMKDKNTVTLNAMITAYAKGGNLVSAKKIFDQ 1132
Query: 269 ISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVE 328
I K+L+SW+S+I ++ +++E F +MQ+ +KP+ V SVL+AC+H G ++
Sbjct: 1133 IP--NKDLISWSSMICAYSQASHFSDSLELFRQMQRAKVKPDAVVIASVLSACAHLGALD 1190
Query: 329 EGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLL 387
G + V + D LIDM + G +++A + + E D + W +++
Sbjct: 1191 LG-KWIHDYVRRNNIKADTIMENSLIDMFAKCGCVQEALQVFTDM--EEKDTLSWNSII 1246
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 80/176 (45%), Gaps = 11/176 (6%)
Query: 259 IFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVL 318
+ SA K+F+ I E W +++ G A K+A+ + + Q+ G+KP+ +TF VL
Sbjct: 890 LVSAHKVFKQI--ESPTTFLWNTLLRGLAQSDAPKDAIVFYKKAQEKGMKPDNLTFPFVL 947
Query: 319 NACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSE-- 376
AC+ +EG + ++ + L DI LI + G L A + +E
Sbjct: 948 KACAKTCAPKEGEQMHNHVI-KLGFLLDIFVSNSLIYLYAACGAL----ACARSVFNEML 1002
Query: 377 ITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGD 432
+ DVV W +L+G S H ++ E +T L D V M +++ GD
Sbjct: 1003 VKDVVSWNSLIGGYSQHNRLK--EVLTLFKLMQAEEVQADKVTMVKVISACTHLGD 1056
>gi|414879991|tpg|DAA57122.1| TPA: putative NAC domain and pentatricopeptide repeat containing
protein [Zea mays]
Length = 868
Score = 427 bits (1097), Expect = e-117, Method: Compositional matrix adjust.
Identities = 214/424 (50%), Positives = 297/424 (70%), Gaps = 21/424 (4%)
Query: 36 TLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLF-----------DSFTYSFLIRTC 84
T L + + +P +AFL + Y+H PL L D+F ++F+++ C
Sbjct: 436 TALKVFDQSPAPWRAFL------KAYSHGPFPLEALHLFKHARQHLADDTFVFTFVLKAC 489
Query: 85 ATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWN 144
A L G QLHA++ + GF+ H YV+TAL+N+YV L ++ K+FDEMP +N+V+WN
Sbjct: 490 AGLGWHRAGAQLHALVVQKGFEFHAYVHTALINVYVMSRCLVEARKVFDEMPVKNVVSWN 549
Query: 145 VMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTE 204
VMITG WGE+E+AR LF++MPCRNVVSWTG+IDGYTR EAL L R M+A +
Sbjct: 550 VMITGFAGWGEVEYARLLFDQMPCRNVVSWTGLIDGYTRACLYAEALTLLRHMMAGGIS- 608
Query: 205 PSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASK 264
PSEIT+LAV+PAI G + ++++GY EK+G + D RV N LID YAK G + ++ K
Sbjct: 609 PSEITVLAVIPAISNLGGILMGEMLNGYCEKKGIMS-DARVGNSLIDLYAKIGSVQNSLK 667
Query: 265 LFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHG 324
+F+++ ++R+NLVSWTSIISGFAMHG+ EA+E F M++ G+KPNR+TFLSV+NACSHG
Sbjct: 668 VFDEM-LDRRNLVSWTSIISGFAMHGLSVEALELFAEMRRAGIKPNRITFLSVINACSHG 726
Query: 325 GLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWR 384
GLVE+GL FF MV E + P+IKH+GC+IDMLGRAGRL +AE+ G+P E+ +V VWR
Sbjct: 727 GLVEQGLAFFKSMVYEYNIDPEIKHFGCIIDMLGRAGRLCEAEQIIEGLPMEV-NVTVWR 785
Query: 385 TLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERN 444
LLG CS +G V MGER + I ++ER GGD+ ++ N+L +GRF DAE+ R+++D+R
Sbjct: 786 ILLGCCSKYGEVAMGERAIKMISDLERESGGDFAVLSNVLTELGRFSDAEQARKLLDQRK 845
Query: 445 AFKV 448
K+
Sbjct: 846 IVKL 849
>gi|48427660|gb|AAT42379.1| At1g09220 [Arabidopsis thaliana]
Length = 338
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 208/338 (61%), Positives = 250/338 (73%), Gaps = 2/338 (0%)
Query: 118 MYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGI 177
MY+ G + D+ K+FDEMPERN VTWNVMITGL G+ E A E+MP R VVSWT I
Sbjct: 1 MYLVGGNMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALCFLEKMPNRTVVSWTTI 60
Query: 178 IDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRG 237
IDGY R+++ EA+ LF +MVAC+ +P+EITILA+LPA+W GD+K C +H Y KRG
Sbjct: 61 IDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLGDLKMCGSVHAYVGKRG 120
Query: 238 FTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVE 297
F DIRV N LID YAKCGCI SA K F +I RKNLVSWT++IS FA+HGMGKEAV
Sbjct: 121 FVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTTMISAFAIHGMGKEAVS 180
Query: 298 NFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEG-LNFFDKMVEECEVLPDIKHYGCLIDM 356
F M+++GLKPNRVT +SVLNACSHGGL EE L FF+ MV E ++ PD+KHYGCL+DM
Sbjct: 181 MFKDMERLGLKPNRVTMISVLNACSHGGLAEEEFLEFFNTMVNEYKITPDVKHYGCLVDM 240
Query: 357 LGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGD 416
L R GRLE+AEK AL IP E VVWR LLGACS + + E+ ERVTRK++E+ER +GGD
Sbjct: 241 LRRKGRLEEAEKIALEIPIE-EKAVVWRMLLGACSVYDDAELAERVTRKLMELERSHGGD 299
Query: 417 YVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
YVLM NI G GRF DA+R R+ MD R K+PG S V
Sbjct: 300 YVLMSNIFCGTGRFLDAQRFRKQMDVRGVAKLPGHSQV 337
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 55/261 (21%), Positives = 113/261 (43%), Gaps = 46/261 (17%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+ T++ Y+ + P++A LL+ ++ + + P + T ++ L +
Sbjct: 57 WTTIIDGYARVDKPKEAILLFSRM--VACDAIKP-----NEITILAILPAVWNLGDLKMC 109
Query: 94 TQLHAVISKVGF-QSHVYVNTALVNMYVSLGFLKDSSKLFDEMP--ERNLVTWNVMITGL 150
+HA + K GF + V +L++ Y G ++ + K F E+P +NLV+W MI+
Sbjct: 110 GSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTTMISAF 169
Query: 151 VKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITI 210
G + A S+F++M E L L +P+ +T+
Sbjct: 170 AIHGMGKEAVSMFKDM----------------------ERLGL----------KPNRVTM 197
Query: 211 LAVLPAIWQNG--DVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFED 268
++VL A G + + + + + T D++ CL+D + G + A K+ +
Sbjct: 198 ISVLNACSHGGLAEEEFLEFFNTMVNEYKITP-DVKHYGCLVDMLRRKGRLEEAEKIALE 256
Query: 269 ISVERKNLVSWTSIISGFAMH 289
I +E K +V W ++ +++
Sbjct: 257 IPIEEKAVV-WRMLLGACSVY 276
>gi|297849224|ref|XP_002892493.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338335|gb|EFH68752.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 337
Score = 423 bits (1087), Expect = e-115, Method: Compositional matrix adjust.
Identities = 208/338 (61%), Positives = 250/338 (73%), Gaps = 2/338 (0%)
Query: 118 MYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGI 177
MY+ G + D+ K+FDEMPERN VTWNVMITGL G+ E A E+M R VVSWT I
Sbjct: 1 MYLVGGNMIDAYKVFDEMPERNPVTWNVMITGLTNLGDFEKALCFLEKMLNRTVVSWTTI 60
Query: 178 IDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRG 237
IDGY R+N+ EA LF +MVAC+ +P+EITILA+LPA+W GD+K C +H Y KRG
Sbjct: 61 IDGYARVNKPKEATLLFSRMVACDAIKPNEITILAILPAVWNLGDLKMCGSVHAYVGKRG 120
Query: 238 FTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVE 297
F DIRV N LID YAKCGCI SA K F +I RKNLVSWT++IS FAMHGMGKEAV
Sbjct: 121 FVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTTMISAFAMHGMGKEAVN 180
Query: 298 NFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEG-LNFFDKMVEECEVLPDIKHYGCLIDM 356
F M+++GLKPNRVT +SVLNACSHGGL EE L FF+KMV + ++ PD+KHYGCL+DM
Sbjct: 181 MFKDMERLGLKPNRVTMISVLNACSHGGLAEEEFLKFFNKMVNKYKITPDVKHYGCLVDM 240
Query: 357 LGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGD 416
L R GRLE+AEK AL IP + VVWR LLGAC+ + + EM ERVTRK++E+ER +GGD
Sbjct: 241 LRRKGRLEEAEKIALEIPID-QKAVVWRMLLGACNVYDDAEMAERVTRKLMELERSHGGD 299
Query: 417 YVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
YVLM NI G GRF DA+R R++MD R K+PG S V
Sbjct: 300 YVLMSNIFCGNGRFSDAQRFRKLMDVRGVAKLPGHSQV 337
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/249 (21%), Positives = 107/249 (42%), Gaps = 45/249 (18%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+ T++ Y+ P++A LL+ ++ + + P + T ++ L +
Sbjct: 57 WTTIIDGYARVNKPKEATLLFSRM--VACDAIKP-----NEITILAILPAVWNLGDLKMC 109
Query: 94 TQLHAVISKVGF-QSHVYVNTALVNMYVSLGFLKDSSKLFDEMP--ERNLVTWNVMITGL 150
+HA + K GF + V +L++ Y G ++ + K F E+P +NLV+W MI+
Sbjct: 110 GSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTTMISAF 169
Query: 151 VKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITI 210
G + A ++F++M E L L +P+ +T+
Sbjct: 170 AMHGMGKEAVNMFKDM----------------------ERLGL----------KPNRVTM 197
Query: 211 LAVLPAIWQNG--DVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFED 268
++VL A G + + + + K T D++ CL+D + G + A K+ +
Sbjct: 198 ISVLNACSHGGLAEEEFLKFFNKMVNKYKITP-DVKHYGCLVDMLRRKGRLEEAEKIALE 256
Query: 269 ISVERKNLV 277
I +++K +V
Sbjct: 257 IPIDQKAVV 265
>gi|242059059|ref|XP_002458675.1| hypothetical protein SORBIDRAFT_03g037910 [Sorghum bicolor]
gi|241930650|gb|EES03795.1| hypothetical protein SORBIDRAFT_03g037910 [Sorghum bicolor]
Length = 894
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 181/320 (56%), Positives = 245/320 (76%), Gaps = 4/320 (1%)
Query: 135 MPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALF 194
MP +N+V+WNV+ITG WGE+E+AR LF++MPCRNVVSWTG+IDGYTR EA+ALF
Sbjct: 1 MPMKNVVSWNVVITGFAGWGEIEYARLLFDQMPCRNVVSWTGLIDGYTRACLYAEAVALF 60
Query: 195 RKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYA 254
R M+A + PSEIT+LAV+PAI G + +++HGY K+G + D RV N LID YA
Sbjct: 61 RHMMAGGIS-PSEITVLAVVPAISNLGGILMGEMLHGYCVKKGIMS-DARVGNSLIDLYA 118
Query: 255 KCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTF 314
K G + ++ K+F+++ ++R+NLVSWTSIISGFAMHG+ EA+E F M++ G++PNR+TF
Sbjct: 119 KIGSVQNSLKVFDEM-LDRRNLVSWTSIISGFAMHGLSVEALELFAEMRRAGIRPNRITF 177
Query: 315 LSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIP 374
LSV+NACSHGGLVE+GL FF MV E + P+IKH+GC+IDMLGRAGRL +AE+ G+P
Sbjct: 178 LSVINACSHGGLVEQGLAFFKSMVYEYNIDPEIKHFGCIIDMLGRAGRLCEAEQIIEGLP 237
Query: 375 SEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAE 434
E+ +V+VWR LLG CS +G VEMG+R + I ++ER GGD+ ++ N+L +GRF DAE
Sbjct: 238 VEV-NVIVWRILLGCCSKYGEVEMGKRAIKMISDLERESGGDFAVLSNVLNELGRFSDAE 296
Query: 435 RLRRVMDERNAFKVPGCSLV 454
+ R+++DER KVPG +LV
Sbjct: 297 QARKLLDERKIVKVPGLALV 316
Score = 250 bits (639), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 145/421 (34%), Positives = 234/421 (55%), Gaps = 13/421 (3%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+N+L+ YS ++ L++ +Q + D T +I C L ++
Sbjct: 479 WNSLIGGYSQRNRFKEVLALFELMQAEEVQA--------DKVTMVKVISACTHLGDWSMA 530
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
+ I + + VY+ L++ Y +G L+ + K+F +M ++N VT N MI K
Sbjct: 531 DCMVRYIERNHIEVDVYLGNTLIDYYCRIGQLQSAEKVFSQMKDKNTVTLNAMIHAYAKG 590
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
G L A+ +F+++P ++++SW+ +I Y++ + +++L LFR+M + +P + I +V
Sbjct: 591 GNLVSAKKIFDQIPNKDLISWSSMICAYSQASHFSDSLELFRQMQRAK-VKPDAVVIASV 649
Query: 214 LPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVER 273
L A G + + IH Y +R D + N LID +AKCGC+ A ++F ++ E
Sbjct: 650 LSACAHLGALDLGKWIHDY-VRRNNIKTDTIMENSLIDMFAKCGCMQEALQVFTEM--EE 706
Query: 274 KNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNF 333
K+ +SW SII G A +G EA+ F M G +PN VTFL VL AC++ LV+EGL+
Sbjct: 707 KDTLSWNSIILGLANNGFEDEALNIFYSMLTEGPRPNEVTFLGVLIACANKRLVQEGLDH 766
Query: 334 FDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFH 393
F++M + P +KHYGC++ +L RAG+LE+A+ +P D VVWR LLGAC H
Sbjct: 767 FERMKTVHNLEPQMKHYGCVVGILSRAGQLEKAKNFINEMPLA-PDPVVWRILLGACKTH 825
Query: 394 GNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSL 453
GNV + E T+K+ E++ GDY+L+ NI A R+ DA +R+ M + K P CS+
Sbjct: 826 GNVAVAEVATKKLSELDPSNSGDYMLLSNIYASADRWSDALNVRQWMADTAVRKSPACSV 885
Query: 454 V 454
V
Sbjct: 886 V 886
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 102/385 (26%), Positives = 179/385 (46%), Gaps = 75/385 (19%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNL 92
L+NTLL + +++P+ A + YK+ Q+ + P D+ T+ F+++ CA P
Sbjct: 377 LWNTLLRGLAQSDAPKDAIVFYKKAQE------KGMKP--DNMTFPFVLKACAKTYAPKE 428
Query: 93 GTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVK 152
G Q+H+ + K+GF ++V+ +L+++Y + G L + +FDEM +++V+WN
Sbjct: 429 GEQMHSHVIKLGFLLDIFVSNSLIHLYAACGDLVCARSIFDEMLVKDVVSWN-------- 480
Query: 153 WGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILA 212
+I GY++ NR E LALF M A E + ++T++
Sbjct: 481 -----------------------SLIGGYSQRNRFKEVLALFELMQA-EEVQADKVTMVK 516
Query: 213 VLPAIWQNGDVKSCQLIHGYGEKR--------GFTAFDIR-------------------- 244
V+ A GD + Y E+ G T D
Sbjct: 517 VISACTHLGDWSMADCMVRYIERNHIEVDVYLGNTLIDYYCRIGQLQSAEKVFSQMKDKN 576
Query: 245 --VLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRM 302
LN +I YAK G + SA K+F+ I K+L+SW+S+I ++ +++E F +M
Sbjct: 577 TVTLNAMIHAYAKGGNLVSAKKIFDQIP--NKDLISWSSMICAYSQASHFSDSLELFRQM 634
Query: 303 QKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGR 362
Q+ +KP+ V SVL+AC+H G ++ G + V + D LIDM + G
Sbjct: 635 QRAKVKPDAVVIASVLSACAHLGALDLG-KWIHDYVRRNNIKTDTIMENSLIDMFAKCGC 693
Query: 363 LEQAEKTALGIPSEITDVVVWRTLL 387
+++A + + E D + W +++
Sbjct: 694 MQEALQVFTEM--EEKDTLSWNSII 716
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 96/223 (43%), Gaps = 49/223 (21%)
Query: 92 LGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPE-RNLVTWNVMITGL 150
+G LH K G S V +L+++Y +G +++S K+FDEM + RNLV+W +I+G
Sbjct: 90 MGEMLHGYCVKKGIMSDARVGNSLIDLYAKIGSVQNSLKVFDEMLDRRNLVSWTSIISGF 149
Query: 151 VKWGELEFARSLFEEM------PCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTE 204
G A LF EM P N +++ +I+ + + LA F+ MV +
Sbjct: 150 AMHGLSVEALELFAEMRRAGIRP--NRITFLSVINACSHGGLVEQGLAFFKSMVYEYNID 207
Query: 205 PSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASK 264
P +I+ C+ID + G + A +
Sbjct: 208 P------------------------------------EIKHFGCIIDMLGRAGRLCEAEQ 231
Query: 265 LFEDISVERKNLVSWTSIISGFAMHG---MGKEAVENFGRMQK 304
+ E + VE N++ W ++ + +G MGK A++ +++
Sbjct: 232 IIEGLPVE-VNVIVWRILLGCCSKYGEVEMGKRAIKMISDLER 273
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 79/350 (22%), Positives = 147/350 (42%), Gaps = 37/350 (10%)
Query: 115 LVNMYVSLGFLKDSSKLFDEMP-ERNLVTWNVMITGLVKWGELEFAR------SLFEEMP 167
+++M G L ++ ++ + +P E N++ W +++ K+GE+E + S E
Sbjct: 216 IIDMLGRAGRLCEAEQIIEGLPVEVNVIVWRILLGCCSKYGEVEMGKRAIKMISDLERES 275
Query: 168 CRNVVSWTGIIDGYTRMNRSNEALALF--RKMVACEYTEPSEITILAVLPAIWQNGDVKS 225
+ + +++ R + + +A L RK+V ++ A+
Sbjct: 276 GGDFAVLSNVLNELGRFSDAEQARKLLDERKIVKVPGLALVVTRSFVMMEAV-------- 327
Query: 226 CQLIHGYGEKRGFTAFDIRVLNCLIDTYA--KCGCIFSASKLFEDISVERKNLVSWTSII 283
+ +H + G ++ +I +YA + +F A K+FE I E W +++
Sbjct: 328 -KKLHAHLVVSGLHNCQY-AMSKVIRSYALQQSDLVF-AHKVFEQI--ESPTTFLWNTLL 382
Query: 284 SGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEV 343
G A K+A+ + + Q+ G+KP+ +TF VL AC+ +EG ++ +
Sbjct: 383 RGLAQSDAPKDAIVFYKKAQEKGMKPDNMTFPFVLKACAKTYAPKEGEQMHSHVI-KLGF 441
Query: 344 LPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSE--ITDVVVWRTLLGACSFHGNVEMGER 401
L DI LI + G L A I E + DVV W +L+G S + E
Sbjct: 442 LLDIFVSNSLIHLYAACGDL----VCARSIFDEMLVKDVVSWNSLIGGYSQRNRFK--EV 495
Query: 402 VTRKILEMERGYGGDYVLMYNILAGVGRFGD---AERLRRVMDERNAFKV 448
+ L D V M +++ GD A+ + R + ERN +V
Sbjct: 496 LALFELMQAEEVQADKVTMVKVISACTHLGDWSMADCMVRYI-ERNHIEV 544
>gi|414866863|tpg|DAA45420.1| TPA: hypothetical protein ZEAMMB73_079127 [Zea mays]
Length = 716
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 190/376 (50%), Positives = 262/376 (69%), Gaps = 13/376 (3%)
Query: 47 PQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQ 106
P +A L+K +Q D+F + F+++ CA L G QLHA++ + GF+
Sbjct: 181 PLEALHLFKHARQHLAD---------DTFVFKFVLKACAGLGWHRAGAQLHALVVQKGFE 231
Query: 107 SHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEM 166
H YV+ AL+N+YV L ++ K+FDEMP +N+V+WNVMITG W E+E+AR LF++M
Sbjct: 232 FHAYVHIALINVYVMSRCLVEARKVFDEMPVKNVVSWNVMITGFAGWDEVEYARLLFDQM 291
Query: 167 PCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSC 226
PCRNVVSWTG+IDGYT EAL L R M+A + PSEI +LAV+PAI G +
Sbjct: 292 PCRNVVSWTGLIDGYTHACLYAEALTLLRHMMAGGIS-PSEIIVLAVIPAISNLGGIVMG 350
Query: 227 QLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGF 286
++++GY EK+G + D+RV N LID YAK G + ++ K+F+++ ++R+NLVSWTSIISGF
Sbjct: 351 EMLNGYCEKKGIMS-DVRVGNSLIDLYAKIGSVQNSLKVFDEM-LDRRNLVSWTSIISGF 408
Query: 287 AMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPD 346
AMHG+ EA+E F M++ G+KPNR+TFLSV+N CSHGGLV++GL FF MV E + P+
Sbjct: 409 AMHGLSVEALELFAEMRRAGIKPNRITFLSVINVCSHGGLVQQGLAFFKSMVYEYNIDPE 468
Query: 347 IKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKI 406
IKH+G +IDMLGRAGRL +AE+ G+P E+ +V VWR LLG S +G VEMGER + I
Sbjct: 469 IKHFGYIIDMLGRAGRLCEAEQIIEGLPMEV-NVTVWRILLGCFSKYGEVEMGERAIKMI 527
Query: 407 LEMERGYGGDYVLMYN 422
++ER GGD++ Y
Sbjct: 528 SDLERESGGDFLQGYE 543
>gi|414866864|tpg|DAA45421.1| TPA: diphthine synthase [Zea mays]
Length = 897
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 190/376 (50%), Positives = 262/376 (69%), Gaps = 13/376 (3%)
Query: 47 PQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQ 106
P +A L+K +Q D+F + F+++ CA L G QLHA++ + GF+
Sbjct: 181 PLEALHLFKHARQHLAD---------DTFVFKFVLKACAGLGWHRAGAQLHALVVQKGFE 231
Query: 107 SHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEM 166
H YV+ AL+N+YV L ++ K+FDEMP +N+V+WNVMITG W E+E+AR LF++M
Sbjct: 232 FHAYVHIALINVYVMSRCLVEARKVFDEMPVKNVVSWNVMITGFAGWDEVEYARLLFDQM 291
Query: 167 PCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSC 226
PCRNVVSWTG+IDGYT EAL L R M+A + PSEI +LAV+PAI G +
Sbjct: 292 PCRNVVSWTGLIDGYTHACLYAEALTLLRHMMAGGIS-PSEIIVLAVIPAISNLGGIVMG 350
Query: 227 QLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGF 286
++++GY EK+G + D+RV N LID YAK G + ++ K+F+++ ++R+NLVSWTSIISGF
Sbjct: 351 EMLNGYCEKKGIMS-DVRVGNSLIDLYAKIGSVQNSLKVFDEM-LDRRNLVSWTSIISGF 408
Query: 287 AMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPD 346
AMHG+ EA+E F M++ G+KPNR+TFLSV+N CSHGGLV++GL FF MV E + P+
Sbjct: 409 AMHGLSVEALELFAEMRRAGIKPNRITFLSVINVCSHGGLVQQGLAFFKSMVYEYNIDPE 468
Query: 347 IKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKI 406
IKH+G +IDMLGRAGRL +AE+ G+P E+ +V VWR LLG S +G VEMGER + I
Sbjct: 469 IKHFGYIIDMLGRAGRLCEAEQIIEGLPMEV-NVTVWRILLGCFSKYGEVEMGERAIKMI 527
Query: 407 LEMERGYGGDYVLMYN 422
++ER GGD++ Y
Sbjct: 528 SDLERESGGDFLQGYE 543
>gi|147770365|emb|CAN78152.1| hypothetical protein VITISV_040250 [Vitis vinifera]
Length = 606
Score = 328 bits (842), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 184/490 (37%), Positives = 284/490 (57%), Gaps = 54/490 (11%)
Query: 1 MHILQNSQTPNNITTQIHSHLLTTNSLL------------------HHSQ---------- 32
+ +L+N +P + Q+H+ ++ TN+ L H++Q
Sbjct: 32 IDLLRNFNSPFELR-QVHAQIIKTNAPLSILPLTRVGLVCAFTPSFHYAQQIFECVEKQK 90
Query: 33 ----LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLS 88
++N+ L + +SP A +L+ +L+Q + P D+FT S ++R C L
Sbjct: 91 PETFVWNSCLKALAEGDSPIDAIMLFYRLRQ-----YDVCP---DTFTCSSVLRACLNLL 142
Query: 89 HPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMIT 148
+ G LH V+ KVGF+S++Y+ +V++Y S G + ++ LF++MP+R++VTWN+MI
Sbjct: 143 DLSNGRILHGVVEKVGFRSNLYLQNMIVHLYASCGEMGEARLLFEKMPQRDVVTWNIMIA 202
Query: 149 GLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKM----VACEYTE 204
L+K G+ E A LF MP RNV SWT +I GY + ++ EA+ LF KM V C
Sbjct: 203 QLIKQGDHEGAYDLFSRMPERNVRSWTSMIAGYVQCGKAKEAIHLFAKMEEAGVKC---- 258
Query: 205 PSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASK 264
+E+T++AVL A G + IH Y + GF ++R+ N LID Y KCGC+ A K
Sbjct: 259 -NEVTVVAVLAACADLGALDLGMRIHEYSNRHGFKR-NVRISNTLIDMYVKCGCLEEACK 316
Query: 265 LFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHG 324
+FE++ E + +VSW+++I G AMHG +EA+ F M +VG++PN VTF+ +L+ACSH
Sbjct: 317 VFEEM--EERTVVSWSAMIGGLAMHGRAEEALRLFSDMSQVGIEPNGVTFIGLLHACSHM 374
Query: 325 GLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWR 384
GL+ EG FF M + ++P I+HYGC++D+L RAG L +A + L +P + + VVW
Sbjct: 375 GLISEGRRFFASMTRDYGIIPQIEHYGCMVDLLSRAGLLHEAHEFILNMPMK-PNGVVWG 433
Query: 385 TLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERN 444
LLGAC H NVEM E + +LE++ G YV++ NI A GR+ D R+R+ M +R
Sbjct: 434 ALLGACRVHKNVEMAEEAIKHLLELDPLNDGYYVVLSNIYAEAGRWEDTARVRKFMKDRQ 493
Query: 445 AFKVPGCSLV 454
K PG S +
Sbjct: 494 VKKTPGWSSI 503
>gi|225461979|ref|XP_002267354.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 632
Score = 328 bits (840), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 184/490 (37%), Positives = 284/490 (57%), Gaps = 54/490 (11%)
Query: 1 MHILQNSQTPNNITTQIHSHLLTTNSLL------------------HHSQ---------- 32
+ +L+N +P + Q+H+ ++ TN+ L H++Q
Sbjct: 32 IDLLRNFNSPFELR-QVHAQIIKTNAPLSILPLTRVGLVCAFTPSFHYAQQIFKCVEKQK 90
Query: 33 ----LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLS 88
++N+ L + +SP A +L+ +L+Q + P D+FT S ++R C L
Sbjct: 91 PETFVWNSCLKALAEGDSPIDAIMLFYRLRQ-----YDVCP---DTFTCSSVLRACLNLL 142
Query: 89 HPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMIT 148
+ G LH V+ KVGF+S++Y+ +V++Y S G + ++ LF++MP+R++VTWN+MI
Sbjct: 143 DLSNGRILHGVVEKVGFRSNLYLQNMIVHLYASCGEMGEARLLFEKMPQRDVVTWNIMIA 202
Query: 149 GLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKM----VACEYTE 204
L+K G+ E A LF MP RNV SWT +I GY + ++ EA+ LF KM V C
Sbjct: 203 QLIKQGDHEGAYDLFSRMPERNVRSWTSMIAGYVQCGKAKEAIHLFAKMEEAGVKC---- 258
Query: 205 PSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASK 264
+E+T++AVL A G + IH Y + GF ++R+ N LID Y KCGC+ A K
Sbjct: 259 -NEVTVVAVLAACADLGALDLGMRIHEYSNRHGFKR-NVRISNTLIDMYVKCGCLEEACK 316
Query: 265 LFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHG 324
+FE++ E + +VSW+++I G AMHG +EA+ F M +VG++PN VTF+ +L+ACSH
Sbjct: 317 VFEEM--EERTVVSWSAMIGGLAMHGRAEEALRLFSDMSQVGIEPNGVTFIGLLHACSHM 374
Query: 325 GLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWR 384
GL+ EG FF M + ++P I+HYGC++D+L RAG L +A + L +P + + VVW
Sbjct: 375 GLISEGRRFFASMTRDYGIIPQIEHYGCMVDLLSRAGLLHEAHEFILNMPMK-PNGVVWG 433
Query: 385 TLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERN 444
LLGAC H NVEM E + +LE++ G YV++ NI A GR+ D R+R+ M +R
Sbjct: 434 ALLGACRVHKNVEMAEEAIKHLLELDPLNDGYYVVLSNIYAEAGRWEDTARVRKFMKDRQ 493
Query: 445 AFKVPGCSLV 454
K PG S +
Sbjct: 494 VKKTPGWSSI 503
>gi|356518302|ref|XP_003527818.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g20540-like [Glycine max]
Length = 535
Score = 325 bits (832), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 166/421 (39%), Positives = 258/421 (61%), Gaps = 12/421 (2%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+N ++ Y+ A ++ Q+ + T S SP D FT+ F+I++CA L LG
Sbjct: 73 YNAIIRTYTHNHKHPLAITVFNQM--LTTKSASP-----DKFTFPFVIKSCAGLLCRRLG 125
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
Q+HA + K G ++H AL++MY G + + ++++EM ER+ V+WN +I+G V+
Sbjct: 126 QQVHAHVCKFGPKTHAITENALIDMYTKCGDMSGAYQVYEEMTERDAVSWNSLISGHVRL 185
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
G+++ AR +F+EMPCR +VSWT +I+GY R +AL +FR+M EP EI++++V
Sbjct: 186 GQMKSAREVFDEMPCRTIVSWTTMINGYARGGCYADALGIFREMQVVG-IEPDEISVISV 244
Query: 214 LPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVER 273
LPA Q G ++ + IH Y EK GF + V N L++ YAKCGCI A LF +
Sbjct: 245 LPACAQLGALEVGKWIHKYSEKSGFLK-NAGVFNALVEMYAKCGCIDEAWGLFNQMI--E 301
Query: 274 KNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNF 333
K+++SW+++I G A HG G A+ F MQK G+ PN VTF+ VL+AC+H GL EGL +
Sbjct: 302 KDVISWSTMIGGLANHGKGYAAIRVFEDMQKAGVTPNGVTFVGVLSACAHAGLWNEGLRY 361
Query: 334 FDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFH 393
FD M + + P I+HYGCL+D+LGR+G++EQA T L +P + D W +LL +C H
Sbjct: 362 FDVMRVDYHLEPQIEHYGCLVDLLGRSGQVEQALDTILKMPMQ-PDSRTWNSLLSSCRIH 420
Query: 394 GNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSL 453
N+E+ ++L++E G+YVL+ NI A + ++ +R+++ + K PGCSL
Sbjct: 421 HNLEIAVVAMEQLLKLEPEESGNYVLLANIYAKLDKWEGVSNVRKLIRSKRIKKTPGCSL 480
Query: 454 V 454
+
Sbjct: 481 I 481
>gi|359476084|ref|XP_002282081.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g20540-like [Vitis vinifera]
Length = 541
Score = 322 bits (824), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 162/422 (38%), Positives = 260/422 (61%), Gaps = 8/422 (1%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNL 92
L+N ++ Y + A +YKQ+ HSH P D FT+ F++++CA L +L
Sbjct: 79 LYNAMIRAYKHNKVYVLAITVYKQM---LGHSHGENPIFPDKFTFPFVVKSCAGLMCYDL 135
Query: 93 GTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVK 152
G Q+H + K G +S+ V +LV MYV L D+ K+F+EM ER+ V+WN +I+G V+
Sbjct: 136 GKQVHGHVFKFGQKSNTVVENSLVEMYVKCDSLDDAHKVFEEMTERDAVSWNTLISGHVR 195
Query: 153 WGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILA 212
G++ AR++FEEM + + SWT I+ GY R+ +AL FR+M EP EI++++
Sbjct: 196 LGQMRRARAIFEEMQDKTIFSWTAIVSGYARIGCYADALEFFRRMQMVG-IEPDEISLVS 254
Query: 213 VLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVE 272
VLPA Q G ++ + IH Y +K GF +I V N LI+ YAKCG I +LF+ ++
Sbjct: 255 VLPACAQLGALELGKWIHFYADKAGFLR-NICVCNALIEMYAKCGSIDEGRRLFDQMN-- 311
Query: 273 RKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLN 332
++++SW+++I G A HG EA+E F MQK ++PN +TF+ +L+AC+H GL+ EGL
Sbjct: 312 ERDVISWSTMIVGLANHGRAHEAIELFQEMQKAKIEPNIITFVGLLSACAHAGLLNEGLR 371
Query: 333 FFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSF 392
+F+ M + + P ++HYGCL+++LG +GRL+QA + +P + D +W +LL +C
Sbjct: 372 YFESMKRDYNIEPGVEHYGCLVNLLGLSGRLDQALELIKKMPMK-PDSAIWGSLLSSCRS 430
Query: 393 HGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCS 452
H N+E+ +LE+E G+YVL+ N+ A +G++ R+R++M ++ K PGCS
Sbjct: 431 HSNLEIAVIAMEHLLELEPADTGNYVLLSNLYADLGKWDGVSRMRKLMRSKSMKKTPGCS 490
Query: 453 LV 454
+
Sbjct: 491 SI 492
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 127/281 (45%), Gaps = 51/281 (18%)
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
E E+A LF+ + N + +I Y A+ ++++M+ + E
Sbjct: 60 AETEYANLLFKRVADPNAFLYNAMIRAYKHNKVYVLAITVYKQMLGHSHGENPIFPDKFT 119
Query: 214 LPAIWQNGDVKSC---------QLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASK 264
P + VKSC + +HG+ K G + + V N L++ Y KC + A K
Sbjct: 120 FPFV-----VKSCAGLMCYDLGKQVHGHVFKFGQKSNTV-VENSLVEMYVKCDSLDDAHK 173
Query: 265 LFEDIS-----------------------------VERKNLVSWTSIISGFAMHGMGKEA 295
+FE+++ ++ K + SWT+I+SG+A G +A
Sbjct: 174 VFEEMTERDAVSWNTLISGHVRLGQMRRARAIFEEMQDKTIFSWTAIVSGYARIGCYADA 233
Query: 296 VENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEG--LNFFDKMVEECEVLPDIKHYGCL 353
+E F RMQ VG++P+ ++ +SVL AC+ G +E G ++F+ ++ L +I L
Sbjct: 234 LEFFRRMQMVGIEPDEISLVSVLPACAQLGALELGKWIHFY---ADKAGFLRNICVCNAL 290
Query: 354 IDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHG 394
I+M + G +++ + L DV+ W T++ + HG
Sbjct: 291 IEMYAKCGSIDEGRR--LFDQMNERDVISWSTMIVGLANHG 329
>gi|449467070|ref|XP_004151248.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 617
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 174/483 (36%), Positives = 281/483 (58%), Gaps = 44/483 (9%)
Query: 2 HILQNSQTPNNITTQIHSHLLTTNS----------------------------LLHHSQL 33
H+L N +P + Q+H+HLL TNS LL S++
Sbjct: 20 HLLHNFTSPFELK-QLHAHLLKTNSPLSSLPLSRVASVCAFNSSFSYAKLIFQLLDASEV 78
Query: 34 --FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPN 91
+NT L ++ +SP A L+ +L++ SP D +T SF+++ C+ L
Sbjct: 79 THWNTCLRSFAEGDSPADAISLFYRLREFDI---SP-----DHYTCSFVLKACSRLLDVR 130
Query: 92 LGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLV 151
G +H + K+G QS++++ +V++Y G + + K+FD+MP+R+++TWN+MI LV
Sbjct: 131 NGKIVHGYVEKLGLQSNMFLQNMIVHLYALCGEIGVARKVFDKMPQRDVITWNIMIARLV 190
Query: 152 KWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITIL 211
K G+ E A LF EMP RNV SWT +I GY + +S EA+ LF +M P+E+T++
Sbjct: 191 KMGDAEGAYKLFAEMPERNVRSWTSMIGGYAQCGKSKEAIDLFLEMEDAGLL-PNEVTVV 249
Query: 212 AVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISV 271
AVL A G++ + IH + + G+ +IRV N LID Y KCGC+ A ++F+++
Sbjct: 250 AVLVACADMGNLVLGRRIHDFSNRSGYEK-NIRVCNTLIDMYVKCGCLEDACRIFDNM-- 306
Query: 272 ERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGL 331
E + +VSW+++I+G A HG ++A+ F +M G+KPN VTF+ +L+ACSH G+VE+G
Sbjct: 307 EERTVVSWSAMIAGLAAHGRAEDALALFNKMINTGVKPNAVTFIGILHACSHMGMVEKGR 366
Query: 332 NFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACS 391
+F M + ++P I+HYGC++D+ RAG L++A + + +P + VVW LLG C
Sbjct: 367 KYFASMTRDYGIVPRIEHYGCMVDLFSRAGLLQEAHEFIMNMPIA-PNGVVWGALLGGCK 425
Query: 392 FHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGC 451
H N+++ E TR + +++ G YV++ NI A GR+ D R+R++M +R K PG
Sbjct: 426 VHKNIKLAEEATRHLSKLDPLNDGYYVVLSNIYAEAGRWEDVARVRKLMRDRGVKKTPGW 485
Query: 452 SLV 454
S +
Sbjct: 486 SSI 488
>gi|224131508|ref|XP_002328557.1| predicted protein [Populus trichocarpa]
gi|222838272|gb|EEE76637.1| predicted protein [Populus trichocarpa]
Length = 643
Score = 319 bits (817), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 170/453 (37%), Positives = 269/453 (59%), Gaps = 42/453 (9%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNL 92
+ NTL+ ++ PQ + L + ++++ +S PP DSF+++F+++ A L +
Sbjct: 72 MHNTLIRGLYESDRPQDSLLKFIEMRR-----NSFSPP--DSFSFAFIVKAAANLRSVRV 124
Query: 93 GTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPE--------------- 137
G QLH G +H++V T L++MY GF+ + K+FDEMPE
Sbjct: 125 GIQLHCQALVHGLDTHLFVGTTLISMYGECGFVGFARKVFDEMPEPNAIAWNAMVTACCR 184
Query: 138 ----------------RNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGY 181
RNL++WNVM+ G K GELE AR +F EMP ++ VSW+ +I G+
Sbjct: 185 GGDMKGGRELFDLMPVRNLMSWNVMLAGYTKAGELELAREMFLEMPMKDDVSWSTMIVGF 244
Query: 182 TRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAF 241
EA + FR++ + P+E ++ VL A Q G ++ +++HG+ EK G A+
Sbjct: 245 AHNGYFEEAFSFFRELQR-KGMRPNETSLTGVLSACAQAGALEFGKILHGFIEKSGL-AW 302
Query: 242 DIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGR 301
+ V N L+DTY+KCG + A +FE I ER N+VSWTS+++ AMHG G+EA+ F +
Sbjct: 303 IVSVNNALLDTYSKCGNVLMAQLVFERIMNER-NIVSWTSMMAALAMHGHGEEAIGIFHK 361
Query: 302 MQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAG 361
M++ G++P+ + F+S+L ACSH GLVE+G +FDKM + P I+HYGC++D+ GRAG
Sbjct: 362 MEESGIRPDEIAFISLLYACSHAGLVEQGCEYFDKMKGMYNIEPSIEHYGCMVDLYGRAG 421
Query: 362 RLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMY 421
+L++A + +P T ++WRTLLGACS HG+V++ E+V ++ E++ D+VL+
Sbjct: 422 QLQKAYEFVCQMPIPCT-AIIWRTLLGACSMHGDVKLAEQVKERLSELDPNNSSDHVLLS 480
Query: 422 NILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
N A G++ DA +RR M E+ K PG S++
Sbjct: 481 NAYAVAGKWKDAASVRRSMTEQRITKTPGWSMI 513
>gi|255551084|ref|XP_002516590.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223544410|gb|EEF45931.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 517
Score = 319 bits (817), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 161/403 (39%), Positives = 250/403 (62%), Gaps = 6/403 (1%)
Query: 53 LYKQLQQIYTHSHSPLPPLF-DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYV 111
YKQ+ + Y +S + + D FT+ F+++ CA L NLG Q+HA K G +SH+
Sbjct: 73 FYKQMLREYRNSQTSEDLILPDEFTFPFVVKACARLGLHNLGKQVHAQFFKFGKKSHLIT 132
Query: 112 NTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNV 171
AL++MY L D+ LFDEM ER ++WN +I+G V+ G++ AR+LF+EMP R +
Sbjct: 133 ENALIDMYTKCDNLLDAHNLFDEMHERGAISWNGIISGHVRLGQMRRARALFDEMPNRTI 192
Query: 172 VSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHG 231
VSWT II GYTR+ +AL +FR+M EP E +I++VLPA + G +++ + IH
Sbjct: 193 VSWTAIISGYTRIGSYIDALDVFREM-QIAGIEPDEASIISVLPACAKLGALETGKWIHM 251
Query: 232 YGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGM 291
+ + G + N LI+ Y KCGCI A +LF+ + ++++SW+++I G A HG
Sbjct: 252 FCARNGLLRRTC-ICNALIEMYTKCGCIDQACQLFD--QMRGRDVISWSTMIGGLANHGK 308
Query: 292 GKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYG 351
+EA+ F RM++ +KPN +TF+ +L+AC+H G EEGL +FD M ++ + P+I+HYG
Sbjct: 309 VREAIAIFERMKQTNIKPNGITFVGLLSACAHAGFWEEGLMYFDTMKKDFHIEPEIEHYG 368
Query: 352 CLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMER 411
L+D+LGRAGRL QA +P + D +W +LL +C H N+E+ + E+E
Sbjct: 369 SLVDLLGRAGRLSQALDIVEKMPMK-PDSKIWGSLLSSCRTHCNIEVAVIAMEHLEELEP 427
Query: 412 GYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
G+YVL+ NI A +G++ D R+R+++ + K PGCSL+
Sbjct: 428 DDTGNYVLLSNIYADLGKWDDVSRMRKLVRSKRMKKTPGCSLI 470
>gi|359489593|ref|XP_003633947.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08510-like [Vitis vinifera]
Length = 512
Score = 318 bits (815), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 184/463 (39%), Positives = 258/463 (55%), Gaps = 25/463 (5%)
Query: 12 NITTQIHSHLLTTNSLLHHSQLFNTLLHFYSLAES-------PQKAFLLYKQLQQIYTHS 64
N QI ++ L N + H QL +LL S+ + P+ LY +L Q Y+ S
Sbjct: 2 NRLKQIQAYTLR-NGIEHTKQLIVSLLQIPSIPYAHKLFDFIPKPTVFLYNKLIQAYS-S 59
Query: 65 HSPLPPLFDSFT-------------YSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYV 111
H P F +T ++FL CA+LS G LH K GF V+
Sbjct: 60 HGPHHQCFSLYTQMCLQGCSPNEHSFTFLFSACASLSSHQQGRMLHTHFVKSGFGCDVFA 119
Query: 112 NTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNV 171
TALV+MY LG L + K FDEM R++ TWN MI G + G+LE A LF MP RNV
Sbjct: 120 LTALVDMYAKLGLLSLARKQFDEMTVRDVPTWNSMIAGYARCGDLEGALELFRLMPARNV 179
Query: 172 VSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHG 231
SWT +I GY + + +AL++F M P+E+T+ +VLPA G ++ + I
Sbjct: 180 TSWTAMISGYAQNGQYAKALSMFLMMEEETEMRPNEVTLASVLPACANLGALEVGERIEV 239
Query: 232 YGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGM 291
Y G+ ++ V N L++ YA+CG I A +FE+I R+NL SW S+I G A+HG
Sbjct: 240 YARGNGYFK-NLYVSNALLEMYARCGRIDKAWGVFEEID-GRRNLCSWNSMIMGLAVHGR 297
Query: 292 GKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYG 351
EA+E F +M + G P+ VTF+ VL AC+HGG+V EG +FF+ M + + P ++HYG
Sbjct: 298 CDEAIELFYKMLREGAAPDDVTFVGVLLACTHGGMVVEGQHFFESMERDFSIAPKLEHYG 357
Query: 352 CLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMER 411
C++D+LGRAG L +A L +P E D VVW TLLGACSFHG+VE+ E+ + E+E
Sbjct: 358 CMVDLLGRAGELREAHDLILRMPME-PDSVVWGTLLGACSFHGHVELAEKAAGALFELEP 416
Query: 412 GYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
G+YV++ NI A GR+ RLR++M K G S +
Sbjct: 417 SNPGNYVILSNIYATAGRWDGVARLRKLMKGGKITKAAGYSFI 459
>gi|356565095|ref|XP_003550780.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Glycine max]
Length = 640
Score = 318 bits (815), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 177/464 (38%), Positives = 267/464 (57%), Gaps = 47/464 (10%)
Query: 27 LLHH-----SQLFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLI 81
L HH + + NTL+ SL+++P + + QL++ T L P DSFT++F +
Sbjct: 58 LFHHFPNPDTFMHNTLIRSLSLSQTPLSSLHPFIQLRRQPT-----LSP--DSFTFAFAL 110
Query: 82 RTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEM------ 135
+ A H G QLH+ + GF +H++V T L++MY G + ++FDEM
Sbjct: 111 KAVANSRHLRPGIQLHSQAFRHGFDAHIFVGTTLISMYAECGDSGSARRVFDEMSEPNVV 170
Query: 136 -------------------------PERNLVTWNVMITGLVKWGELEFARSLFEEMPCRN 170
P RNL +WN M+ G K GEL AR +F EMP R+
Sbjct: 171 TWNAVLTAAFRCGDVEGAQDVFGCMPVRNLTSWNGMLAGYAKAGELGLARRVFYEMPLRD 230
Query: 171 VVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIH 230
VSW+ +I G+ +EA FR+++ E +E+++ VL A Q G + +++H
Sbjct: 231 EVSWSTMIVGFAHNGCFDEAFGFFRELLR-EEIRTNEVSLTGVLSACAQAGAFEFGKILH 289
Query: 231 GYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHG 290
G+ EK GF + V N LIDTY+KCG + A +F+++ V R ++VSWTSII+G AMHG
Sbjct: 290 GFVEKAGFL-YVGSVNNALIDTYSKCGNVAMARLVFQNMPVAR-SIVSWTSIIAGLAMHG 347
Query: 291 MGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHY 350
G+EA++ F M++ G++P+ +TF+S+L ACSH GLVEEG F KM + P I+HY
Sbjct: 348 CGEEAIQLFHEMEESGVRPDGITFISLLYACSHSGLVEEGCGLFSKMKNLYGIEPAIEHY 407
Query: 351 GCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEME 410
GC++D+ GRA RL++A + +P + ++WRTLLGACS HGN+EM E V ++ EM+
Sbjct: 408 GCMVDLYGRAARLQKAYEFICEMPVS-PNAIIWRTLLGACSIHGNIEMAELVKARLAEMD 466
Query: 411 RGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
GD+VL+ N+ A G++ D +RR M E + K PG S++
Sbjct: 467 PDNSGDHVLLSNVYAVAGKWKDVSSIRRTMTEHSMKKTPGWSMI 510
>gi|359491266|ref|XP_002280289.2| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 663
Score = 318 bits (814), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 165/426 (38%), Positives = 252/426 (59%), Gaps = 16/426 (3%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNL 92
++N ++ YS S Q++ L+ Q+ H P D +T++F+ C+ HP L
Sbjct: 121 IWNLMIQAYSKTPSSQESLYLF---HQMLAHGR---PTSADKYTFTFVFTACS--RHPTL 172
Query: 93 ---GTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITG 149
G +H ++ K G++S ++V +LVNMY + D+ ++FDEMP+R+++TW ++ G
Sbjct: 173 RGYGENVHGMVVKDGYESDIFVGNSLVNMYSIFSRMVDAKRVFDEMPQRDVITWTSVVKG 232
Query: 150 LVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEIT 209
GEL AR LF+ MP RN VSW ++ GY NEAL F M+ + +P+E
Sbjct: 233 YAMRGELVRARELFDMMPGRNDVSWAVMVAGYVGHRFYNEALQCFNDMLCHDEVKPNEAV 292
Query: 210 ILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDI 269
++++L A G + + IH Y +K + LID YAKCG I A ++F+ +
Sbjct: 293 LVSILSACAHLGALDQGKWIHVYIDKNRIL-LSSNISTALIDMYAKCGRIDCARRVFDGL 351
Query: 270 SVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEE 329
+++L++WTS+ISG +MHG+G E + F M G KP+ +T L VLN CSH GLVEE
Sbjct: 352 --HKRDLLTWTSMISGLSMHGLGAECLWTFSEMLAEGFKPDDITLLGVLNGCSHSGLVEE 409
Query: 330 GLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGA 389
GL+ F M+ ++P ++HYGCLID+LGRAGRLE A + +P E DVV WR LL A
Sbjct: 410 GLSIFHDMIPLWGIVPKLEHYGCLIDLLGRAGRLESAFEAIKSMPME-PDVVAWRALLSA 468
Query: 390 CSFHGNVEMGERVTRKILEMERG-YGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKV 448
C HG+V++GER+ I E+ G +GG YVL+ N+ A +G++ ++R+ M +R +
Sbjct: 469 CRIHGDVDLGERIINHIAELCPGSHGGGYVLLSNLYASMGQWESVTKVRKAMSQRGSEGC 528
Query: 449 PGCSLV 454
PGCS +
Sbjct: 529 PGCSWI 534
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 96/431 (22%), Positives = 176/431 (40%), Gaps = 83/431 (19%)
Query: 47 PQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATL-----SHPNLG--TQLHAV 99
P+ Y Q +Y S++ S T SF + + +T P+L Q+HA
Sbjct: 18 PRLQEPFYVQSPLVYISSNTSSAIWEPSGTSSFSLPSHSTFVQLLKKRPSLTQIKQIHAQ 77
Query: 100 ISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPE-RNLVTWNVMITGLVKWGELEF 158
+ G + + L++ Y+ L + +FD+ P + WN+M
Sbjct: 78 VVTHGLAQNTSLLGPLIHSYIGCRNLSFARIVFDQFPSLPPTIIWNLM------------ 125
Query: 159 ARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVA-CEYTEPSEITILAVLPAI 217
I Y++ S E+L LF +M+A T + T V A
Sbjct: 126 -------------------IQAYSKTPSSQESLYLFHQMLAHGRPTSADKYTFTFVFTAC 166
Query: 218 WQNGDVKSC-QLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNL 276
++ ++ + +HG K G+ + DI V N L++ Y+ + A ++F+++ ++++
Sbjct: 167 SRHPTLRGYGENVHGMVVKDGYES-DIFVGNSLVNMYSIFSRMVDAKRVFDEMP--QRDV 223
Query: 277 VSWTSIISGFAMHGMGKEAVENFGRMQK-------------VG----------------- 306
++WTS++ G+AM G A E F M VG
Sbjct: 224 ITWTSVVKGYAMRGELVRARELFDMMPGRNDVSWAVMVAGYVGHRFYNEALQCFNDMLCH 283
Query: 307 --LKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLE 364
+KPN +S+L+AC+H G +++G + +++ +L LIDM + GR++
Sbjct: 284 DEVKPNEAVLVSILSACAHLGALDQG-KWIHVYIDKNRILLSSNISTALIDMYAKCGRID 342
Query: 365 QAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEM-ERGYGGDYVLMYNI 423
A + G+ D++ W +++ S HG +G EM G+ D + + +
Sbjct: 343 CARRVFDGLHKR--DLLTWTSMISGLSMHG---LGAECLWTFSEMLAEGFKPDDITLLGV 397
Query: 424 LAGVGRFGDAE 434
L G G E
Sbjct: 398 LNGCSHSGLVE 408
>gi|224141809|ref|XP_002324255.1| predicted protein [Populus trichocarpa]
gi|222865689|gb|EEF02820.1| predicted protein [Populus trichocarpa]
Length = 547
Score = 316 bits (810), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 160/423 (37%), Positives = 264/423 (62%), Gaps = 8/423 (1%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQIYT-HSHSPLPPLFDSFTYSFLIRTCATLSHPN 91
L+N ++ ++ + A L YK++ ++ S +P+ P D FT+ F+I++C+ L N
Sbjct: 79 LYNAMIRAHTHNKVYALAILFYKEMLRLKDPESENPIFP--DRFTFPFVIKSCSGLVCYN 136
Query: 92 LGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLV 151
LG Q+HA + K G +S++ + AL++MY L D+ K+FD M ER+ ++WN +I+G V
Sbjct: 137 LGKQVHAHLCKFGPKSNITMENALIDMYTKCASLLDAHKVFDGMVERDAISWNSIISGHV 196
Query: 152 KWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITIL 211
G++ A +LF+ MP R +VSWT +I GYTR+ +AL +FR+M EP EI+I+
Sbjct: 197 GVGQMRKAGALFDLMPYRTIVSWTAMISGYTRLGSYADALYVFRQMQIVG-VEPDEISII 255
Query: 212 AVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISV 271
+VLPA Q G ++ + IH Y ++ G + N L++ Y+KCGCI A +LF+ +S
Sbjct: 256 SVLPACAQLGALEVGKWIHMYCDRNGLLR-KTSICNALMEMYSKCGCIGQAYQLFDQMS- 313
Query: 272 ERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGL 331
+ +++SW+++I G A HG +EA+E F RM+K ++PN +TFL +L+AC+H G EGL
Sbjct: 314 -KGDVISWSTMIGGLANHGKAREAIELFKRMKKAKIEPNGITFLGLLSACAHAGFWNEGL 372
Query: 332 NFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACS 391
+FD M ++ + P+++HYGCL+D+LGRAGRL QA +P + D +W +LL +C
Sbjct: 373 AYFDSMSKDYHIEPEVEHYGCLVDILGRAGRLSQALDVIEKMPMK-PDSKIWGSLLSSCR 431
Query: 392 FHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGC 451
H N+++ + E+E G+YVL+ NI A + ++ R+R+++ ++ K PG
Sbjct: 432 THSNLDIAIIAMEHLEELEPDDTGNYVLLSNIYADLAKWDGVSRMRKLIKSKSMKKTPGS 491
Query: 452 SLV 454
SL+
Sbjct: 492 SLI 494
>gi|357466605|ref|XP_003603587.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492635|gb|AES73838.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 568
Score = 315 bits (807), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 162/396 (40%), Positives = 244/396 (61%), Gaps = 7/396 (1%)
Query: 59 QIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNM 118
Q+ THS + + P D FT+ F+I++C + LG Q+H ++ K G H AL++M
Sbjct: 98 QMLTHSTNSVFP--DKFTFPFVIKSCTGILCHRLGMQVHGLVYKFGADFHCITENALIDM 155
Query: 119 YVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGII 178
Y G L ++ K+F+EM R++++WN +I G VK G++ AR LF++MP R +VSWT +I
Sbjct: 156 YTKFGDLTNACKVFEEMSHRDVISWNSLIFGYVKLGQMNSARELFDDMPVRTIVSWTTMI 215
Query: 179 DGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGF 238
GY RM +AL +FR+M EP EI+I+AVLPA Q G ++ + IH Y +K GF
Sbjct: 216 TGYGRMGCYGDALDVFREMQMVG-IEPDEISIIAVLPACAQLGALEVGKWIHMYADKNGF 274
Query: 239 TAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVEN 298
+ N LI+ YAKCGCI A LF+ + K+++SW+++I G A HG G EA++
Sbjct: 275 LR-KTGICNALIEMYAKCGCIDEAWNLFDQLV--EKDVISWSTMIGGLANHGKGYEAIQL 331
Query: 299 FGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLG 358
F M KV + PN +TFL VL ACSH GL +EGL +FD M + P+I+HYGCLID+LG
Sbjct: 332 FEEMCKVRVAPNEITFLGVLLACSHTGLWDEGLKYFDVMSASYHIEPEIEHYGCLIDLLG 391
Query: 359 RAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYV 418
R+G L QA T +P + D +W +LL +C H N+++ ++++E+E G+YV
Sbjct: 392 RSGCLGQALDTISKMPIK-PDSRIWNSLLSSCRIHRNLQIAVIAVKQLMELEPEESGNYV 450
Query: 419 LMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
L+ N+ A G++ D +R+++ + K PG S +
Sbjct: 451 LLANMYAEHGKWEDVSNIRKLIRNKRIKKTPGSSSI 486
>gi|225457427|ref|XP_002282084.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Vitis vinifera]
Length = 643
Score = 314 bits (805), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 170/480 (35%), Positives = 279/480 (58%), Gaps = 53/480 (11%)
Query: 17 IHSHLLTTNSLLHHSQLF-----------NTLLHFYSLAESPQKAFLLYKQLQQIYTHSH 65
+HS + ++L + +LF NTL+ + +++PQ + + + ++++ T
Sbjct: 45 LHSAVSVPDALDYARRLFLHFPNPDVFMHNTLIRGLAESDTPQNSLITFVEMRRRLT--- 101
Query: 66 SPLPPLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFL 125
+PL DSF+++FL++ A+ G QLH G +H++V T LV+MY GF+
Sbjct: 102 APL----DSFSFAFLLKAAASYRSLESGIQLHCQAIVHGLDTHLFVGTTLVSMYSECGFV 157
Query: 126 KDSSKLFDEM-------------------------------PERNLVTWNVMITGLVKWG 154
+ K+F+EM P RNL +WNVM+ G K G
Sbjct: 158 AFAKKVFEEMFEPNVVAWNAVVTACFRCGDVKGADMMFNRMPFRNLTSWNVMLAGYTKAG 217
Query: 155 ELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVL 214
ELE AR LF EMP ++ VSW+ +I G+ EA FR++ P+E+++ L
Sbjct: 218 ELELARKLFLEMPVKDDVSWSTMIVGFAHNGFFYEAFGFFRELQQVG-MRPNEVSLTGAL 276
Query: 215 PAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERK 274
A G ++ +++HG+ EK GF + + V N L+DTY+KCG + A +FE + E++
Sbjct: 277 SACADAGAIEFGKILHGFIEKSGFL-WMVSVNNALLDTYSKCGNVGMARLVFERMP-EKR 334
Query: 275 NLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFF 334
++VSWTS+I+G AMHG G+EA++ F M++ G++P+ + F+S+L ACSH GL+E+G +F
Sbjct: 335 SIVSWTSMIAGLAMHGYGEEAIQLFHEMEESGIRPDGIAFISILYACSHAGLIEKGYEYF 394
Query: 335 DKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHG 394
KM + + P I+HYGC++D+ GRAG+L++A + + +P + ++WRTLLGACS HG
Sbjct: 395 YKMKDIYNIEPAIEHYGCMVDLYGRAGQLDKAYEFIIHMPV-LPTAIIWRTLLGACSIHG 453
Query: 395 NVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
NV++ ERV ++ E++ GD+VL+ NI A G++ D +RR M ++ K PG S++
Sbjct: 454 NVKLAERVKERLSELDPNNSGDHVLLSNIYAVAGKWKDVAAVRRSMTDQRMNKTPGWSMI 513
>gi|225430143|ref|XP_002282128.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20540
[Vitis vinifera]
Length = 537
Score = 314 bits (804), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 158/422 (37%), Positives = 261/422 (61%), Gaps = 8/422 (1%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNL 92
L+N ++ Y + A +YKQ+ H +P+ P D FT+ F++++CA L +L
Sbjct: 79 LYNAMIRAYKHNKVYVLAITVYKQMLG-NPHGENPIFP--DKFTFPFVVKSCAGLMCYDL 135
Query: 93 GTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVK 152
G Q+H + K G +S+ V +LV MYV L D+ ++F+EM ER+ V+WN +I+G V+
Sbjct: 136 GKQVHGHVFKFGQKSNTVVENSLVEMYVKCDSLDDAHRVFEEMTERDAVSWNTLISGHVR 195
Query: 153 WGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILA 212
G++ AR++FEEM + + SWT I+ GY R+ +AL FR+M EP EI++++
Sbjct: 196 LGQMRRARAIFEEMQDKTIFSWTAIVSGYARIGCYADALEFFRRMQMVG-IEPDEISLVS 254
Query: 213 VLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVE 272
VLP Q G ++ + IH Y +K GF +I V N LI+ YAKCG I +LF+ + +
Sbjct: 255 VLPDCAQLGALELGKWIHIYADKAGFLR-NICVCNALIEMYAKCGSIDQGRRLFDQM--K 311
Query: 273 RKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLN 332
++++SW+++I G A HG +EA+E F MQK ++P+ +TF+ +L AC+H GL+ EGL
Sbjct: 312 ERDVISWSTMIVGLANHGRAREAIELFQEMQKAKIEPSIITFVGLLTACAHAGLLNEGLR 371
Query: 333 FFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSF 392
+F+ M + + P ++HYGCL+++LG +GRL+QA + +P + D +W +LL +C
Sbjct: 372 YFESMKRDYNIEPGVEHYGCLVNLLGLSGRLDQALELVKKMPRK-PDSPIWGSLLSSCRS 430
Query: 393 HGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCS 452
HGN+++ +LE+E G+YVL+ N+ A +G++ R+R++M ++ K PGCS
Sbjct: 431 HGNLKIAVIAMEHLLELEPADTGNYVLLSNLYADLGKWDGVSRMRKLMRSKSMKKTPGCS 490
Query: 453 LV 454
+
Sbjct: 491 SI 492
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 126/280 (45%), Gaps = 47/280 (16%)
Query: 153 WGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILA 212
+GE E+A LF+ + N + +I Y A+ ++++M+ + E
Sbjct: 59 YGETEYANLLFKGVADPNAFLYNAMIRAYKHNKVYVLAITVYKQMLGNPHGENPIFPDKF 118
Query: 213 VLPAIWQNGDVKSC---------QLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSAS 263
P + VKSC + +HG+ K G + + V N L++ Y KC + A
Sbjct: 119 TFPFV-----VKSCAGLMCYDLGKQVHGHVFKFGQKSNTV-VENSLVEMYVKCDSLDDAH 172
Query: 264 KLFEDIS-----------------------------VERKNLVSWTSIISGFAMHGMGKE 294
++FE+++ ++ K + SWT+I+SG+A G +
Sbjct: 173 RVFEEMTERDAVSWNTLISGHVRLGQMRRARAIFEEMQDKTIFSWTAIVSGYARIGCYAD 232
Query: 295 AVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLI 354
A+E F RMQ VG++P+ ++ +SVL C+ G +E G + ++ L +I LI
Sbjct: 233 ALEFFRRMQMVGIEPDEISLVSVLPDCAQLGALELG-KWIHIYADKAGFLRNICVCNALI 291
Query: 355 DMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHG 394
+M + G ++Q + L + DV+ W T++ + HG
Sbjct: 292 EMYAKCGSIDQGRR--LFDQMKERDVISWSTMIVGLANHG 329
>gi|449496903|ref|XP_004160258.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 583
Score = 314 bits (804), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 171/476 (35%), Positives = 278/476 (58%), Gaps = 44/476 (9%)
Query: 2 HILQNSQTPNNITTQIHSHLLTTNS----------------------------LLHHSQL 33
H+L N +P + Q+H+HLL TNS LL S++
Sbjct: 20 HLLHNFTSPFELK-QLHAHLLKTNSPLSSLPLSRVASVCAFNSSFSYAKLIFQLLDASEV 78
Query: 34 --FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPN 91
+NT L ++ +SP A L+ +L++ SP D +T SF+++ C+ L
Sbjct: 79 THWNTCLRSFAEGDSPADAISLFYRLREFDI---SP-----DHYTCSFVLKACSRLLDVR 130
Query: 92 LGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLV 151
G +H + K+G QS++++ +V++Y G + + K+FD+MP+R+++TWN+MI LV
Sbjct: 131 NGKIVHGYVEKLGLQSNMFLQNMIVHLYALCGEIGVARKVFDKMPQRDVITWNIMIARLV 190
Query: 152 KWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITIL 211
K G+ E A LF EMP RNV SWT +I GY + +S EA+ LF +M P+E+T++
Sbjct: 191 KMGDAEGAYKLFAEMPERNVRSWTSMIGGYAQCGKSKEAIDLFLEMEDAGLL-PNEVTVV 249
Query: 212 AVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISV 271
AVL A G++ + IH + + G+ +IRV N LID Y KCGC+ A ++F+++
Sbjct: 250 AVLVACADMGNLVLGRRIHDFSNRSGYEK-NIRVCNTLIDMYVKCGCLEDACRIFDNM-- 306
Query: 272 ERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGL 331
E + +VSW+++I+G A HG ++A+ F +M G+KPN VTF+ +L+ACSH G+VE+G
Sbjct: 307 EERTVVSWSAMIAGLAAHGRAEDALALFNKMINTGVKPNAVTFIGILHACSHMGMVEKGR 366
Query: 332 NFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACS 391
+F M + ++P I+HYGC++D+ RAG L++A + + +P + VVW LLG C
Sbjct: 367 KYFASMTRDYGIVPRIEHYGCMVDLFSRAGLLQEAHEFIMNMPIA-PNGVVWGALLGGCK 425
Query: 392 FHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFK 447
H NV++ E TR + +++ G YV++ NI A GR+ D R+R++M +R ++
Sbjct: 426 VHKNVKLAEEATRHLSKLDPLNDGYYVVLSNIYAEAGRWEDVARVRKLMRDRGTWE 481
>gi|224073108|ref|XP_002303975.1| predicted protein [Populus trichocarpa]
gi|222841407|gb|EEE78954.1| predicted protein [Populus trichocarpa]
Length = 508
Score = 312 bits (800), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 167/427 (39%), Positives = 262/427 (61%), Gaps = 17/427 (3%)
Query: 33 LFNTLLHFYSLAES-PQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPN 91
L+N ++ S + + P+ + LY +Q + L P DS+++ F ++ S
Sbjct: 44 LYNNIIKALSSSPTHPKASIFLYNNIQL------AGLRP--DSYSFPFALKAVTRFSSIQ 95
Query: 92 LGTQLHAVISKVGFQSHVYVNTALVNMYVSLGF--LKDSSKLFD--EMPERNLVTWNVMI 147
G QLH+ + G S ++V TA V MY S G + D+ K+FD M ++ WN M+
Sbjct: 96 TGRQLHSQSIRFGLHSDLHVLTAFVQMYSSFGSGCICDARKMFDGMSMSTGDVALWNAML 155
Query: 148 TGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSE 207
G K G+L AR LFE MP RNV+SWT +I GY + NR ++A+ALFR+M E EP E
Sbjct: 156 NGYAKHGDLCNARDLFERMPQRNVISWTALITGYAQANRPHDAIALFRRM-QLENVEPDE 214
Query: 208 ITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFE 267
I +L L A + G ++ + I Y ++ G +I + N LID YAK G I SA ++FE
Sbjct: 215 IAMLVALTACARLGALELGEWIRHYIDRLGLLTTNIPLNNALIDMYAKSGDIKSALQVFE 274
Query: 268 DISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLV 327
+++ K +++WT++I+G A+HG+G EA+E F RM++ +KPN +TF+++L+ACSH GLV
Sbjct: 275 NMN--HKTIITWTTMIAGLALHGLGTEALEMFSRMERARVKPNDITFIAILSACSHVGLV 332
Query: 328 EEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLL 387
+ G +F++M+ + P I+HYGC+ID+LGRAG L++A+ +P E + V+W +LL
Sbjct: 333 QTGRWYFNRMISRYGIEPKIEHYGCMIDLLGRAGHLKEAQTLLAQMPFE-PNAVIWGSLL 391
Query: 388 GACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFK 447
AC+ HG+ E+GE + +LE+E G+Y L+ NI A GR+ ++ +R+VM + K
Sbjct: 392 AACNTHGDPELGELALQHLLELEPDNSGNYALLSNIYASRGRWNESRVVRKVMWDAGVKK 451
Query: 448 VPGCSLV 454
+PG SL+
Sbjct: 452 MPGGSLI 458
>gi|223946989|gb|ACN27578.1| unknown [Zea mays]
gi|414586292|tpg|DAA36863.1| TPA: hypothetical protein ZEAMMB73_743648 [Zea mays]
Length = 545
Score = 312 bits (800), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 158/424 (37%), Positives = 252/424 (59%), Gaps = 6/424 (1%)
Query: 32 QLFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPN 91
L N ++ Y+ + A +Y ++ + H + + D FTY FL++ C L+
Sbjct: 74 HLHNAMIKAYAQNHLHRDAVEVYVRMLRCLPHPSTAGFSVGDRFTYPFLLKACGALAASR 133
Query: 92 LGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLV 151
LG Q+HA +++ G +SH V +L+ MY G L + K FD M E+++V+WN +I+
Sbjct: 134 LGRQVHAHVARSGCESHAVVQNSLIEMYTRCGDLSTARKAFDGMREKDVVSWNTLISAHA 193
Query: 152 KWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITIL 211
+ G++ AR LF MP + VVSWT ++ GYT + A+ +FR M E EP +++I+
Sbjct: 194 RMGQMRRARELFYSMPDKTVVSWTALVSGYTAVGDFTGAVEVFRLM-QMEGFEPDDVSIV 252
Query: 212 AVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISV 271
AVLPA Q G ++ + I+ Y K G + + N L++ YAKCGCI A +LF +S
Sbjct: 253 AVLPACAQLGALELGRWIYAYCSKHGMLG-KVYICNALMEMYAKCGCIEEALQLFHGMS- 310
Query: 272 ERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVG-LKPNRVTFLSVLNACSHGGLVEEG 330
K+++SW++ I G A HG +EAV F M + G + PN +TF+ +L+ACSH GLV+EG
Sbjct: 311 -EKDVISWSTAIGGLAAHGRAREAVRLFEVMDREGRVMPNGITFVGLLSACSHAGLVDEG 369
Query: 331 LNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGAC 390
L + D+M E+ V P ++HYGC++D+LGR+GR+++A T G+P D +W +LL AC
Sbjct: 370 LRYLDQMKEDYGVEPGVEHYGCVVDLLGRSGRIQRALDTIRGMPVP-PDGKIWGSLLSAC 428
Query: 391 SFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPG 450
HG+VE +++E+E G G+ V++ N+ GR+G+ R+ + R+ K PG
Sbjct: 429 RSHGDVETAVVAAERLVELEPGDVGNLVMLANVYGAAGRWGEVASTRKEIRSRSTRKTPG 488
Query: 451 CSLV 454
CS++
Sbjct: 489 CSMI 492
>gi|449439619|ref|XP_004137583.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Cucumis sativus]
gi|449487109|ref|XP_004157499.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Cucumis sativus]
Length = 642
Score = 311 bits (798), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 170/453 (37%), Positives = 262/453 (57%), Gaps = 43/453 (9%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNL 92
++NTL+ S +++P A L+ ++++ LP DSF+++FL++ A
Sbjct: 72 MYNTLIRGLSDSDTPSNALQLFVEMRR----KSVALP---DSFSFAFLLKAAANCRALTN 124
Query: 93 GTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEM----------------- 135
G QLH + G SH++V T L++MY L + K+FDEM
Sbjct: 125 GLQLHCLAVGYGLDSHLFVGTTLISMYAECACLVFARKVFDEMIEPNIVAWNAIVAACFR 184
Query: 136 --------------PERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGY 181
P RNL +WN+M+ G K GEL+ AR +F +MP ++ VSW+ +I G+
Sbjct: 185 CEGVKDAEQVFRCMPIRNLTSWNIMLAGYTKAGELQLAREVFMKMPLKDDVSWSTMIVGF 244
Query: 182 TRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAF 241
N+A A FR+ V E P+E+++ VL A Q G + +++HG+ EK GF
Sbjct: 245 AHNGNFNDAFAFFRE-VRREGMRPNEVSLTGVLSACAQAGAFEFGRILHGFVEKSGFLQI 303
Query: 242 DIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGR 301
I V N LIDTY+KCG + A +F+++ R++ VSWT++I+G AMHG G+EA+ F
Sbjct: 304 -ISVNNALIDTYSKCGNLDMARLVFDNML--RRSAVSWTAMIAGMAMHGYGEEAIRLFNE 360
Query: 302 MQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAG 361
M++ +KP+ +TF+S+L ACSH GLV+ G ++F +MV + P I+HYGC++D+ GRAG
Sbjct: 361 MEESNIKPDSITFISILYACSHAGLVDLGCSYFSRMVNTYGIEPVIEHYGCMVDLYGRAG 420
Query: 362 RLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMY 421
+L+QA +P D +VWRTLLGACS HGN+ + +V R++ E++ GD+VL+
Sbjct: 421 KLQQAYDFVCQMPISPND-IVWRTLLGACSIHGNLYLAGQVKRQLSELDPENSGDHVLLS 479
Query: 422 NILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
NI A G++ D LRR M + K PG S++
Sbjct: 480 NIYAVAGKWKDVAALRRSMTHQRLKKTPGWSMI 512
>gi|449452775|ref|XP_004144134.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g56310-like [Cucumis sativus]
gi|449493602|ref|XP_004159370.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g56310-like [Cucumis sativus]
Length = 548
Score = 310 bits (793), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 161/423 (38%), Positives = 258/423 (60%), Gaps = 13/423 (3%)
Query: 32 QLFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPN 91
+L+NT + S SP A LY +++ L P DS++ +++ LS
Sbjct: 88 RLYNTAIKALSKTSSPINAIWLYTRIRI------DGLRP--DSYSIPSVLKAVVKLSAVE 139
Query: 92 LGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLV 151
+G Q+H V V T+L+ MY S GF+ D+ KLFD + +++ WN M+ G V
Sbjct: 140 VGRQIHTQTVSSALDMDVNVATSLIQMYSSCGFVSDARKLFDFVGFKDVALWNAMVAGYV 199
Query: 152 KWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITIL 211
K GEL+ AR +F EMP RNV+SWT +I GY + NR +EA+ LFRKM E EP EI +L
Sbjct: 200 KVGELKSARKVFNEMPQRNVISWTTLIAGYAQTNRPHEAIELFRKM-QLEEVEPDEIAML 258
Query: 212 AVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISV 271
AVL A G ++ + IH Y EK G + + N LID YAK G I A ++FE++
Sbjct: 259 AVLSACADLGALELGEWIHNYIEKHGLCRI-VSLYNALIDMYAKSGNIRRALEVFENM-- 315
Query: 272 ERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGL 331
++K++++W+++I+ A+HG+G EA++ F RM+K ++PN VTF+++L+ACSH G+V+ G
Sbjct: 316 KQKSVITWSTVIAALALHGLGGEAIDMFLRMEKAKVRPNEVTFVAILSACSHVGMVDVGR 375
Query: 332 NFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACS 391
+FD+M ++ P I+HYGC+ID+L RAG L++A+K +P E + ++W +LL A +
Sbjct: 376 YYFDQMQSMYKIEPKIEHYGCMIDLLARAGYLQEAQKLLHDMPFE-ANAMIWGSLLAASN 434
Query: 392 FHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGC 451
H + E+ + + + ++E G G+YVL+ N A +G++ ++ +R++M K PG
Sbjct: 435 THRDAELAQLALKHLAKLEPGNSGNYVLLSNTYAALGKWNESGTVRKLMRNAGVKKAPGG 494
Query: 452 SLV 454
S++
Sbjct: 495 SVI 497
>gi|225452869|ref|XP_002283796.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g15300-like [Vitis vinifera]
Length = 550
Score = 310 bits (793), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 169/471 (35%), Positives = 265/471 (56%), Gaps = 43/471 (9%)
Query: 15 TQIHSHLLTTNSLLHHSQLFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDS 74
T ++H L + + ++NT++ + + SP A LY Q++ + + P D
Sbjct: 62 TMAYAHQLFPHITEPDTFMWNTMIRGSAQSPSPLNAISLYSQME------NGCVRP--DK 113
Query: 75 FTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVN---------------------- 112
FT+ F+++ C L +G +H + ++GF+S+ +V
Sbjct: 114 FTFPFVLKACTRLCWVKMGFGVHGRVFRLGFESNTFVRNTLIYFHANCGDLAVARALFDG 173
Query: 113 ---------TALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLF 163
+AL Y G L + +LFDEMP ++LV+WNVMITG K GE+E AR LF
Sbjct: 174 SAKRDVVAWSALTAGYARRGELGVARQLFDEMPVKDLVSWNVMITGYAKRGEMESARKLF 233
Query: 164 EEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDV 223
+E+P R+VV+W +I GY + +AL +F +M + P E+T+L++L A GD+
Sbjct: 234 DEVPKRDVVTWNAMIAGYVLCGSNQQALEMFEEMRSVGEL-PDEVTMLSLLSACTDLGDL 292
Query: 224 KSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSII 283
+ Q IH + GF + + N LID YAKCG I A ++F+ + K++ +W S++
Sbjct: 293 DAGQRIHCCISEMGFRDLSVLLGNALIDMYAKCGSIVRALEVFQ--GMREKDVSTWNSVL 350
Query: 284 SGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEV 343
G A HG ++++ F M+K+ ++P+ +TF+ VL ACSH G VEEG +FD M +E +
Sbjct: 351 GGLAFHGHAEKSIHLFTEMRKLKIRPDEITFVGVLVACSHAGRVEEGRQYFDLMRDEYNI 410
Query: 344 LPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVT 403
P+I+HYGC++D+LGRAG L +A + E + +VWRTLLGAC HGNVE+G R
Sbjct: 411 EPNIRHYGCMVDLLGRAGLLNEAFDFIDTMKIE-PNAIVWRTLLGACRIHGNVELGRRAN 469
Query: 404 RKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
++L+M GDYVL+ NI A G + E++R++MD+ K GCSL+
Sbjct: 470 MQLLKMRHDESGDYVLLSNIYASRGEWDGVEKVRKLMDDSGVRKEAGCSLI 520
>gi|296082942|emb|CBI22243.3| unnamed protein product [Vitis vinifera]
Length = 526
Score = 309 bits (792), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 169/471 (35%), Positives = 265/471 (56%), Gaps = 43/471 (9%)
Query: 15 TQIHSHLLTTNSLLHHSQLFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDS 74
T ++H L + + ++NT++ + + SP A LY Q++ + + P D
Sbjct: 27 TMAYAHQLFPHITEPDTFMWNTMIRGSAQSPSPLNAISLYSQME------NGCVRP--DK 78
Query: 75 FTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVN---------------------- 112
FT+ F+++ C L +G +H + ++GF+S+ +V
Sbjct: 79 FTFPFVLKACTRLCWVKMGFGVHGRVFRLGFESNTFVRNTLIYFHANCGDLAVARALFDG 138
Query: 113 ---------TALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLF 163
+AL Y G L + +LFDEMP ++LV+WNVMITG K GE+E AR LF
Sbjct: 139 SAKRDVVAWSALTAGYARRGELGVARQLFDEMPVKDLVSWNVMITGYAKRGEMESARKLF 198
Query: 164 EEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDV 223
+E+P R+VV+W +I GY + +AL +F +M + P E+T+L++L A GD+
Sbjct: 199 DEVPKRDVVTWNAMIAGYVLCGSNQQALEMFEEMRSVGEL-PDEVTMLSLLSACTDLGDL 257
Query: 224 KSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSII 283
+ Q IH + GF + + N LID YAKCG I A ++F+ + K++ +W S++
Sbjct: 258 DAGQRIHCCISEMGFRDLSVLLGNALIDMYAKCGSIVRALEVFQ--GMREKDVSTWNSVL 315
Query: 284 SGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEV 343
G A HG ++++ F M+K+ ++P+ +TF+ VL ACSH G VEEG +FD M +E +
Sbjct: 316 GGLAFHGHAEKSIHLFTEMRKLKIRPDEITFVGVLVACSHAGRVEEGRQYFDLMRDEYNI 375
Query: 344 LPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVT 403
P+I+HYGC++D+LGRAG L +A + E + +VWRTLLGAC HGNVE+G R
Sbjct: 376 EPNIRHYGCMVDLLGRAGLLNEAFDFIDTMKIE-PNAIVWRTLLGACRIHGNVELGRRAN 434
Query: 404 RKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
++L+M GDYVL+ NI A G + E++R++MD+ K GCSL+
Sbjct: 435 MQLLKMRHDESGDYVLLSNIYASRGEWDGVEKVRKLMDDSGVRKEAGCSLI 485
>gi|225435834|ref|XP_002283791.1| PREDICTED: pentatricopeptide repeat-containing protein At5g56310
[Vitis vinifera]
Length = 576
Score = 309 bits (792), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 165/437 (37%), Positives = 267/437 (61%), Gaps = 13/437 (2%)
Query: 18 HSHLLTTNSLLHHSQLFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTY 77
+SH + T+ L+NT++ S E +A LLY ++ S L FD+++
Sbjct: 91 YSHSIFTHKTRPDIYLYNTIIKALSNPELATEAILLYNRILA------SDLR--FDTYSL 142
Query: 78 SFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPE 137
F+++ L ++G Q+H G S ++V TAL+ MY S G + ++ +LFD +
Sbjct: 143 PFVLKAVVRLLAIHVGRQIHCQAIGTGLVSDIHVVTALIQMYSSCGCVSEARQLFDGVCF 202
Query: 138 RNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKM 197
R++ WN M+ G K G+++ AR LFE MP RNV+SWT +I GY +M+R NEA+ +FR+M
Sbjct: 203 RDVAFWNAMVAGYAKVGDVDNARHLFERMPERNVISWTAVIAGYAQMDRPNEAITMFRRM 262
Query: 198 VACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCG 257
E EP EI +LA L A G ++ + IH Y +K G + + + N LID YAKCG
Sbjct: 263 -QLEEVEPDEIAMLAALSACAHLGALELGEWIHNYIDKHGLSKI-VPLNNALIDMYAKCG 320
Query: 258 CIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSV 317
I A ++F+++ E K++++WTS+I G A+HG+G+EA+E F M++ +KPN +TF+++
Sbjct: 321 KIEKALEVFKNM--EHKSVITWTSMIDGLALHGLGREALEMFSCMERNRIKPNEITFVAI 378
Query: 318 LNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEI 377
L+AC H GLVE G +F M + + P I+HYGC+ID+LGRAG L++A++ G+P E
Sbjct: 379 LSACCHVGLVEMGRWYFKCMGTKYGIKPKIQHYGCMIDLLGRAGFLQEAQELVRGMPFE- 437
Query: 378 TDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLR 437
+ +W +LL A HG+ E+G++ + ++++E G+Y L+ NI A ++ +A +R
Sbjct: 438 ANAPIWGSLLAAARIHGDAELGKQALQHLIKVEPHNSGNYTLLSNIYATQSKWNEAGMVR 497
Query: 438 RVMDERNAFKVPGCSLV 454
+VM + K+PG S +
Sbjct: 498 KVMRDTGVKKMPGGSCI 514
>gi|15225375|ref|NP_179644.1| mitochondrial editing factor 21 [Arabidopsis thaliana]
gi|75337271|sp|Q9SIL5.1|PP165_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g20540
gi|4586036|gb|AAD25654.1| unknown protein [Arabidopsis thaliana]
gi|67633530|gb|AAY78689.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|330251931|gb|AEC07025.1| mitochondrial editing factor 21 [Arabidopsis thaliana]
Length = 534
Score = 309 bits (791), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 163/422 (38%), Positives = 258/422 (61%), Gaps = 12/422 (2%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNL 92
L+N+++ Y+ +YKQL LP D FT+ F+ ++CA+L L
Sbjct: 75 LYNSIIRAYTHNSLYCDVIRIYKQL----LRKSFELP---DRFTFPFMFKSCASLGSCYL 127
Query: 93 GTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVK 152
G Q+H + K G + HV AL++MY+ L D+ K+FDEM ER++++WN +++G +
Sbjct: 128 GKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYAR 187
Query: 153 WGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILA 212
G+++ A+ LF M + +VSWT +I GYT + EA+ FR+M EP EI++++
Sbjct: 188 LGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAG-IEPDEISLIS 246
Query: 213 VLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVE 272
VLP+ Q G ++ + IH Y E+RGF V N LI+ Y+KCG I A +LF + E
Sbjct: 247 VLPSCAQLGSLELGKWIHLYAERRGFLK-QTGVCNALIEMYSKCGVISQAIQLFGQM--E 303
Query: 273 RKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLN 332
K+++SW+++ISG+A HG A+E F MQ+ +KPN +TFL +L+ACSH G+ +EGL
Sbjct: 304 GKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLR 363
Query: 333 FFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSF 392
+FD M ++ ++ P I+HYGCLID+L RAG+LE+A + +P + D +W +LL +C
Sbjct: 364 YFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPMK-PDSKIWGSLLSSCRT 422
Query: 393 HGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCS 452
GN+++ ++E+E G+YVL+ NI A +G++ D RLR+++ N K PG S
Sbjct: 423 PGNLDVALVAMDHLVELEPEDMGNYVLLANIYADLGKWEDVSRLRKMIRNENMKKTPGGS 482
Query: 453 LV 454
L+
Sbjct: 483 LI 484
>gi|147774372|emb|CAN72397.1| hypothetical protein VITISV_041201 [Vitis vinifera]
Length = 576
Score = 309 bits (791), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 165/437 (37%), Positives = 267/437 (61%), Gaps = 13/437 (2%)
Query: 18 HSHLLTTNSLLHHSQLFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTY 77
+SH + T+ L+NT++ S E +A LLY ++ S L FD+++
Sbjct: 91 YSHSIFTHKTRPDIYLYNTIIKALSNPELATEAILLYNRILA------SDLR--FDTYSL 142
Query: 78 SFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPE 137
F+++ L ++G Q+H G S ++V TAL+ MY S G + ++ +LFD +
Sbjct: 143 PFVLKAVVRLLAIHVGRQIHCQAIGTGLVSDIHVVTALIQMYSSCGCVSEARQLFDGVCF 202
Query: 138 RNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKM 197
R++ WN M+ G K G+++ AR LFE MP RNV+SWT +I GY +M+R NEA+ +FR+M
Sbjct: 203 RDVAFWNAMVAGYAKVGDVDNARHLFERMPERNVISWTAVIAGYAQMDRPNEAITMFRRM 262
Query: 198 VACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCG 257
E EP EI +LA L A G ++ + IH Y +K G + + + N LID YAKCG
Sbjct: 263 -QLEEVEPDEIAMLAALSACAHLGALELGEWIHNYIDKHGLSKI-VPLNNALIDMYAKCG 320
Query: 258 CIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSV 317
I A ++F+++ E K++++WTS+I G A+HG+G+EA+E F M++ +KPN +TF+++
Sbjct: 321 KIEKALEVFKNM--EHKSVITWTSMIDGLALHGLGREALEMFSCMERNRIKPNEITFVAI 378
Query: 318 LNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEI 377
L+AC H GLVE G +F M + + P I+HYGC+ID+LGRAG L++A++ G+P E
Sbjct: 379 LSACCHVGLVEMGRWYFKCMGTKYGIKPKIQHYGCMIDLLGRAGFLQEAQELVRGMPFE- 437
Query: 378 TDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLR 437
+ +W +LL A HG+ E+G++ + ++++E G+Y L+ NI A ++ +A +R
Sbjct: 438 ANAPIWGSLLAAARIHGDAELGKQALQHLIKVEPHNSGNYTLLSNIYATQSKWNEAGMVR 497
Query: 438 RVMDERNAFKVPGCSLV 454
+VM + K+PG S +
Sbjct: 498 KVMRDTGVKKMPGGSCI 514
>gi|225447043|ref|XP_002269269.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 640
Score = 309 bits (791), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 158/420 (37%), Positives = 252/420 (60%), Gaps = 12/420 (2%)
Query: 35 NTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLGT 94
NTL+ Y+ + +P A + Y ++ T S P D T+ L++ C+ + LG
Sbjct: 104 NTLIRAYAFSPNPIDAVVFYSEM----TESSVVFP---DVHTFPLLLKACSEIPSLRLGE 156
Query: 95 QLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWG 154
+H+ + K+G+ S V V+ LV MY S G ++ + +FD PE + +WN+MI G +K G
Sbjct: 157 AIHSHVFKLGWSSEVSVSNFLVQMYASCGLIESAGLVFDRTPECDGASWNIMIGGYLKCG 216
Query: 155 ELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVL 214
+ AR +FE MP R+VVSW+ +I+GY + +R E L LF+ M+ E EP+E ++ L
Sbjct: 217 VFKSARRMFEAMPDRDVVSWSVMINGYVQESRFKEGLGLFQDMMG-EKIEPNESVLVNAL 275
Query: 215 PAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERK 274
A G ++ Q I Y E++ +R+ LID Y+KCG + A ++F + + K
Sbjct: 276 SACAHLGAMEQGQWIERYMERKN-VRLTVRLGTALIDMYSKCGSVERALEVFHKM--KEK 332
Query: 275 NLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFF 334
N+++W+++I+G A++G GK+A+ F +M+ G+KPN VTF+ +LNACSH LV+EG +FF
Sbjct: 333 NVLAWSAMINGLAINGQGKDALNLFSQMEMQGVKPNEVTFIGILNACSHSKLVDEGCSFF 392
Query: 335 DKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHG 394
M + P+ H+ C++D+ GRAG L+QA+ +P + + +W LL AC HG
Sbjct: 393 HSMTSIYGLKPNAHHHCCMVDLYGRAGMLDQAQTVIKSMPFK-PNSAIWGALLNACRIHG 451
Query: 395 NVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
+ E+GE+V +++LE++ +GG YVL+ NI A GR+ LRR+M ER K PGCS +
Sbjct: 452 DTELGEQVGKRLLELDPNHGGRYVLLSNIYAACGRWDRVAELRRMMRERQVSKTPGCSFI 511
>gi|356559933|ref|XP_003548250.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08510-like [Glycine max]
Length = 512
Score = 308 bits (790), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 165/436 (37%), Positives = 250/436 (57%), Gaps = 15/436 (3%)
Query: 24 TNSLLHHSQ-----LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYS 78
+ +LHHS L+N L+ YS PQ + Q+ HS P + T++
Sbjct: 35 AHKVLHHSPKPTLFLYNKLIQAYS--SHPQHQHQCFSLYSQMLLHSFLP-----NQHTFN 87
Query: 79 FLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPER 138
FL C +LS P+LG LH K GF+ ++ TAL++MY +G L+ + KLFD+MP R
Sbjct: 88 FLFSACTSLSSPSLGQMLHTHFIKSGFEPDLFAATALLDMYTKVGTLELARKLFDQMPVR 147
Query: 139 NLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMV 198
+ TWN M+ G ++G+++ A LF MP RNVVSWT +I GY+R + EAL LF +M
Sbjct: 148 GVPTWNAMMAGHARFGDMDVALELFRLMPSRNVVSWTTMISGYSRSKKYGEALGLFLRME 207
Query: 199 ACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGC 258
+ P+ +T+ ++ PA G ++ Q + Y K GF ++ V N +++ YAKCG
Sbjct: 208 QEKGMMPNAVTLASIFPAFANLGALEIGQRVEAYARKNGFFK-NLYVSNAVLEMYAKCGK 266
Query: 259 IFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVL 318
I A K+F +I R NL SW S+I G A+HG + ++ + +M G P+ VTF+ +L
Sbjct: 267 IDVAWKVFNEIGSLR-NLCSWNSMIMGLAVHGECCKTLKLYDQMLGEGTSPDDVTFVGLL 325
Query: 319 NACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEIT 378
AC+HGG+VE+G + F M ++P ++HYGC++D+LGRAG+L +A + +P +
Sbjct: 326 LACTHGGMVEKGRHIFKSMTTSFNIIPKLEHYGCMVDLLGRAGQLREAYEVIQRMPMK-P 384
Query: 379 DVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRR 438
D V+W LLGACSFH NVE+ E + +E G+YV++ NI A G++ +LR+
Sbjct: 385 DSVIWGALLGACSFHDNVELAEIAAESLFALEPWNPGNYVILSNIYASAGQWDGVAKLRK 444
Query: 439 VMDERNAFKVPGCSLV 454
VM K G S +
Sbjct: 445 VMKGSKITKSAGHSFI 460
>gi|297832654|ref|XP_002884209.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330049|gb|EFH60468.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 534
Score = 308 bits (789), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 160/422 (37%), Positives = 257/422 (60%), Gaps = 12/422 (2%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNL 92
L+N+++ Y+ +YKQL + P D FT+ F+ ++CA+L L
Sbjct: 75 LYNSIIRAYTHNSLYCDVIRIYKQLLR----KTIEFP---DRFTFPFMFKSCASLGSCYL 127
Query: 93 GTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVK 152
G Q+H + K G + HV AL++MY+ L D+ K+FDEM ER++++WN +++G +
Sbjct: 128 GKQVHGHLYKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMSERDVISWNSLLSGYAR 187
Query: 153 WGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILA 212
G+++ A+ LF M + +VSWT +I GYT + EA+ FR+M EP EI++++
Sbjct: 188 LGQMKKAKGLFHLMIDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAG-IEPDEISLIS 246
Query: 213 VLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVE 272
VLP+ G ++ + IH Y E+RG V N LI+ Y+KCG + A +LFE +
Sbjct: 247 VLPSCAHLGSLELGKWIHMYAERRGLLK-QTGVCNALIEMYSKCGMLSQAIQLFE--QTK 303
Query: 273 RKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLN 332
K+++SW+++ISG+A HG A E F MQ+ +KPN +TFL +L+ACSH GL ++GL
Sbjct: 304 GKDVISWSTMISGYAYHGNAHRAFETFIEMQRAKVKPNGITFLGLLSACSHVGLWQQGLK 363
Query: 333 FFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSF 392
+FD M ++ ++ P I+HYGCLID+L RAG+LE+A + +P + D +W +LL +C
Sbjct: 364 YFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPVK-PDSKIWGSLLSSCRT 422
Query: 393 HGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCS 452
GN+++ ++E+E G+YVL+ NI A +G++ D RLR+++ + N K PGCS
Sbjct: 423 KGNLDVALVAMDHLVEVEPDDMGNYVLLANIYADLGKWEDVSRLRKIIRKENMKKTPGCS 482
Query: 453 LV 454
L+
Sbjct: 483 LI 484
>gi|357501951|ref|XP_003621264.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496279|gb|AES77482.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 519
Score = 308 bits (788), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 165/453 (36%), Positives = 256/453 (56%), Gaps = 43/453 (9%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNL 92
++N ++ S + +P +A LY ++ + + DS+T+ F+++ C L N
Sbjct: 75 MYNVMIRGSSQSPNPLRAISLYTEMHRHFVKG--------DSYTFPFVLKACTRLFWVNT 126
Query: 93 GTQLHAVISKVGFQSHVYVN-------------------------------TALVNMYVS 121
G+ +H ++ ++GF S+ V ++L+ Y
Sbjct: 127 GSAVHGMVLRLGFGSNAVVRNTLLVFHAKCGDLNVATSLFDDSCKGDVVAWSSLIAGYAR 186
Query: 122 LGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGY 181
G LK + KLF+EMPER+LV+WNVMITG VK GE+E AR LF+E P ++VVSW +I GY
Sbjct: 187 RGDLKVARKLFNEMPERDLVSWNVMITGYVKQGEMESARMLFDEAPVKDVVSWNAMIAGY 246
Query: 182 TRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAF 241
S +AL LF +M P E+T+L++L A GD+++ + +H +
Sbjct: 247 VVCGLSKQALELFNEMCRAGVF-PDEVTLLSLLSACADLGDLENGKKVHAKVMEISMGKL 305
Query: 242 DIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGR 301
+ N LID YAKCG I + +F S+ K+++SW S+I G A+HG GKE++ F
Sbjct: 306 STLLGNALIDMYAKCGNIKESLDVF--WSITDKDVISWNSVIVGMALHGHGKESLSLFKM 363
Query: 302 MQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAG 361
MQ+ + PN +TF+ VL ACSH G ++EG +FD M E ++ P+I+H GC++DMLGRAG
Sbjct: 364 MQRTKICPNEITFVGVLVACSHAGEIDEGYKYFDLMSSEYKIEPNIRHCGCMVDMLGRAG 423
Query: 362 RLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMY 421
L++A K + E + ++WRTLL AC HG+VE+ + K+ M + + GDYVLM
Sbjct: 424 LLKEAAKFIDSMKIE-PNAIIWRTLLAACKVHGDVELAKVANEKLFSMRKDHSGDYVLMS 482
Query: 422 NILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
N+ A G + AE++R++MD+ K+ G S V
Sbjct: 483 NLYASRGEWDGAEKVRKLMDDSGVTKIRGSSFV 515
>gi|242073754|ref|XP_002446813.1| hypothetical protein SORBIDRAFT_06g023080 [Sorghum bicolor]
gi|241937996|gb|EES11141.1| hypothetical protein SORBIDRAFT_06g023080 [Sorghum bicolor]
Length = 547
Score = 307 bits (787), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 163/443 (36%), Positives = 262/443 (59%), Gaps = 12/443 (2%)
Query: 14 TTQIHSHLLTTNSLLHHSQLFNTLLHFYSLAESPQKAFLLY-KQLQQIYTHSHSPLPPLF 72
++ +H+ N LH N ++ Y+ + A +Y + L+ + S S +
Sbjct: 61 AARVFAHVPAPNLHLH-----NAMIKAYAQNHLHRDAVEVYVRMLRCLPDPSSSGGFSVG 115
Query: 73 DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLF 132
D FTY FL++ C L+ LG Q+HA +++ G +SH V +L+ MY G L + K+F
Sbjct: 116 DRFTYPFLLKACGGLAASQLGRQVHAHVARSGCESHAIVQNSLIEMYTRCGDLSLARKVF 175
Query: 133 DEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALA 192
D M E++ V+WN +I+ + G++ AR LF MP + VVSWT ++ GYT + A+
Sbjct: 176 DGMREKDAVSWNTLISAHARMGQMRKARELFHSMPDKTVVSWTALVSGYTAVGDFAGAVE 235
Query: 193 LFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDT 252
+FR+M E EP +++I+AVLPA Q G ++ + I+ Y K G I + N L++
Sbjct: 236 VFRQM-QMEGFEPDDVSIVAVLPACAQLGALELGRWIYAYCNKHGMLG-KIYICNALMEM 293
Query: 253 YAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVG-LKPNR 311
YAKCGCI A +LF +S K+++SW++ I G A HG +EAV+ F M + G + PN
Sbjct: 294 YAKCGCIEEALQLFHGMS--EKDVISWSTAIGGLAAHGRAREAVKLFEVMDREGRVMPNG 351
Query: 312 VTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTAL 371
+TF+ +L+ACSH GL++EGL +FD+M EE V P ++HYGC++D+LGR+GR+++A T
Sbjct: 352 ITFVGLLSACSHAGLLDEGLRYFDRMKEEYGVEPSVEHYGCVVDLLGRSGRIQRALDTIG 411
Query: 372 GIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFG 431
G+P D +W +LL AC H +V+ +++E+E G+ V++ N+ A GR+G
Sbjct: 412 GMPIP-PDGKIWGSLLSACRSHSDVDTAVVAAERLVELEPEDVGNLVMLANVYAAAGRWG 470
Query: 432 DAERLRRVMDERNAFKVPGCSLV 454
+ R+ + R+ K PGCS++
Sbjct: 471 NVASTRKEIRSRSTRKTPGCSMI 493
>gi|242052493|ref|XP_002455392.1| hypothetical protein SORBIDRAFT_03g010050 [Sorghum bicolor]
gi|241927367|gb|EES00512.1| hypothetical protein SORBIDRAFT_03g010050 [Sorghum bicolor]
Length = 506
Score = 305 bits (782), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 169/443 (38%), Positives = 257/443 (58%), Gaps = 25/443 (5%)
Query: 16 QIHSHLLTTNSLLHHSQLFNTLLHFYSLAESPQK-----AFLLYKQLQQIYTHSHSPLPP 70
Q H+ LL H + +L L PQ+ A LL + +Y + + LP
Sbjct: 29 QAHAFLLPRGGHRHPRLVSALILASLRLVPHPQQTSDHAAALLRRVHPSVYLRAAARLP- 87
Query: 71 LFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVG-FQSHVYVNTALVNMYVSLGFLKDSS 129
S L+R LG QLH+++ + G S +V+ +LV +Y + + D+
Sbjct: 88 -------SHLLRRSL------LGPQLHSLLLRTGHVASDTHVSASLVQLYCTCRHVADAR 134
Query: 130 KLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNE 189
+F EM R++V WNVMI G VK G+L AR LF+ MP RNVVSWT +I GY +M R E
Sbjct: 135 SVFHEMAVRDVVAWNVMIAGYVKAGDLAHARELFDAMPERNVVSWTTVIGGYAQMRRPEE 194
Query: 190 ALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCL 249
A+ +FR+M E EP + +L+VL A G V + +H + +RG +I ++N +
Sbjct: 195 AVEVFRRM-QVEGIEPDGVALLSVLSACGDLGAVDLGEWVHRFVVRRGLRQ-EIPLMNSI 252
Query: 250 IDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKP 309
ID Y KCGCI A ++FE +E K++V+WT++I+GFA+HG+G +AVE F RM++ + P
Sbjct: 253 IDMYMKCGCIEKAVEVFE--GMEEKSVVTWTTLIAGFALHGLGLQAVEMFRRMERENMAP 310
Query: 310 NRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKT 369
N VTFL++L+ACSH GL + G +F+ MV + + P ++HYGC++D+LGRAG L++A+
Sbjct: 311 NDVTFLAILSACSHVGLTDLGRWYFNIMVSQYRIKPQVEHYGCMVDLLGRAGCLKEAQDL 370
Query: 370 ALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGR 429
+P + + +W LL A HG+ ++GE ++E+E G+Y+L+ NI A R
Sbjct: 371 VKDMPLK-ANAAIWGALLAASRTHGDADLGEEALVHLIELEPSNSGNYILLSNIFAEQER 429
Query: 430 FGDAERLRRVMDERNAFKVPGCS 452
+ D +LR+ M ER VPG S
Sbjct: 430 WDDVSKLRKAMKERGLRNVPGAS 452
>gi|147832325|emb|CAN66581.1| hypothetical protein VITISV_030261 [Vitis vinifera]
Length = 622
Score = 305 bits (781), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 160/423 (37%), Positives = 258/423 (60%), Gaps = 15/423 (3%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNL 92
++NT++ YS ++ P++A LLY + +Y HS +P +++T+ FL++ C+++S
Sbjct: 85 MWNTMIRGYSNSKEPEEALLLYHHM--LY---HS-VP--HNAYTFPFLLKACSSMSASEE 136
Query: 93 GTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVK 152
Q+HA I K+GF S +Y +L+N+Y G +K + LFD++ +R+ V+WN MI G K
Sbjct: 137 TQQIHAHIIKMGFGSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDTVSWNSMIDGYTK 196
Query: 153 WGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILA 212
GE+E A +F MP RN++SWT +I G + EAL LF +M + + +++
Sbjct: 197 CGEIEMAYEIFNHMPERNIISWTSMISGCVGAGKPKEALNLFHRMQTAG-IKLDNVALVS 255
Query: 213 VLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNC-LIDTYAKCGCIFSASKLFEDISV 271
L A G + + IH Y +K I L C LID YAKCG + A ++F +
Sbjct: 256 TLQACADLGVLDQGKWIHAYIKKHEIEIDPI--LGCVLIDMYAKCGDLEEAIEVFRKM-- 311
Query: 272 ERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGL 331
E K + WT++ISG+A+HG G+EA+E F +MQ G++PN++TF +L ACSH GLV E
Sbjct: 312 EEKGVSVWTAMISGYAIHGRGREALEWFMKMQTAGVEPNQMTFTGILTACSHAGLVHEAK 371
Query: 332 NFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACS 391
F+ M P I+HYGC++D+LGRAG L++AE+ +P + + +W LL AC
Sbjct: 372 LLFESMERIHGFKPSIEHYGCMVDLLGRAGLLKEAEELIENMPVK-PNAAIWGALLNACH 430
Query: 392 FHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGC 451
HGN+E+G+++ + +++++ G+GG Y+ + +I A G + A R+RR M E+ K+PGC
Sbjct: 431 IHGNLELGKQIGKILIQVDPGHGGRYIHLASIHAAAGEWNQAARVRRQMKEQGVSKLPGC 490
Query: 452 SLV 454
S++
Sbjct: 491 SVI 493
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 88/309 (28%), Positives = 141/309 (45%), Gaps = 54/309 (17%)
Query: 123 GFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYT 182
G + + + DE+P L+ + G L +AR++F+ + N W +I GY+
Sbjct: 39 GQMLKTGLILDEIPASKLLAFCASPNS----GSLAYARTVFDRIFRPNTFMWNTMIRGYS 94
Query: 183 RMNRSNEALALFRKMV----------------ACEYTEPSE------------------I 208
EAL L+ M+ AC SE
Sbjct: 95 NSKEPEEALLLYHHMLYHSVPHNAYTFPFLLKACSSMSASEETQQIHAHIIKMGFGSEIY 154
Query: 209 TILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFED 268
T ++L ++GD+KS +L+ ++R D N +ID Y KCG I A ++F
Sbjct: 155 TTNSLLNVYSKSGDIKSARLLFDQVDQR-----DTVSWNSMIDGYTKCGEIEMAYEIFNH 209
Query: 269 ISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVE 328
+ +N++SWTS+ISG G KEA+ F RMQ G+K + V +S L AC+ G+++
Sbjct: 210 MP--ERNIISWTSMISGCVGAGKPKEALNLFHRMQTAGIKLDNVALVSTLQACADLGVLD 267
Query: 329 EG--LNFFDKMVEECEVLPDIKHYGC-LIDMLGRAGRLEQAEKTALGIPSEITDVVVWRT 385
+G ++ + K E E+ P + GC LIDM + G LE+A + + E V VW
Sbjct: 268 QGKWIHAYIKK-HEIEIDPIL---GCVLIDMYAKCGDLEEAIEVFRKM--EEKGVSVWTA 321
Query: 386 LLGACSFHG 394
++ + HG
Sbjct: 322 MISGYAIHG 330
>gi|225425100|ref|XP_002272744.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 622
Score = 304 bits (779), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 160/423 (37%), Positives = 258/423 (60%), Gaps = 15/423 (3%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNL 92
++NT++ YS ++ P++A LLY + +Y HS +P +++T+ FL++ C+++S
Sbjct: 85 MWNTMIRGYSNSKEPEEALLLYHHM--LY---HS-VP--HNAYTFPFLLKACSSMSALEE 136
Query: 93 GTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVK 152
Q+HA I K+GF S +Y +L+N+Y G +K + LFD++ +R+ V+WN MI G K
Sbjct: 137 TQQIHAHIIKMGFGSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDTVSWNSMIDGYTK 196
Query: 153 WGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILA 212
GE+E A +F MP RN++SWT +I G + EAL LF +M + + +++
Sbjct: 197 CGEIEMAYEIFNHMPERNIISWTSMISGCVGAGKPKEALNLFHRMQTAG-IKLDNVALVS 255
Query: 213 VLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNC-LIDTYAKCGCIFSASKLFEDISV 271
L A G + + IH Y +K I L C LID YAKCG + A ++F +
Sbjct: 256 TLQACADLGVLDQGKWIHAYIKKHEIEIDPI--LGCVLIDMYAKCGDLEEAIEVFRKM-- 311
Query: 272 ERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGL 331
E K + WT++ISG+A+HG G+EA+E F +MQ G++PN++TF +L ACSH GLV E
Sbjct: 312 EEKGVSVWTAMISGYAIHGRGREALEWFMKMQTAGVEPNQMTFTGILTACSHAGLVHEAK 371
Query: 332 NFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACS 391
F+ M P I+HYGC++D+LGRAG L++AE+ +P + + +W LL AC
Sbjct: 372 LLFESMERIHGFKPSIEHYGCMVDLLGRAGLLKEAEELIENMPVK-PNAAIWGALLNACH 430
Query: 392 FHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGC 451
HGN+E+G+++ + +++++ G+GG Y+ + +I A G + A R+RR M E+ K+PGC
Sbjct: 431 IHGNLELGKQIGKILIQVDPGHGGRYIHLASIHAAAGEWNQAARVRRQMKEQGVSKLPGC 490
Query: 452 SLV 454
S++
Sbjct: 491 SVI 493
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 90/309 (29%), Positives = 144/309 (46%), Gaps = 54/309 (17%)
Query: 123 GFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYT 182
G + + + DE+P L+ + G L +AR++F+ + N W +I GY+
Sbjct: 39 GQMLKTGLILDEIPASKLLAFCASPNS----GSLAYARTVFDRIFRPNTFMWNTMIRGYS 94
Query: 183 RMNRSNEALALFRKMV----------------------ACEYTEP-----------SEI- 208
EAL L+ M+ A E T+ SEI
Sbjct: 95 NSKEPEEALLLYHHMLYHSVPHNAYTFPFLLKACSSMSALEETQQIHAHIIKMGFGSEIY 154
Query: 209 TILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFED 268
T ++L ++GD+KS +L+ ++R D N +ID Y KCG I A ++F
Sbjct: 155 TTNSLLNVYSKSGDIKSARLLFDQVDQR-----DTVSWNSMIDGYTKCGEIEMAYEIFNH 209
Query: 269 ISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVE 328
+ +N++SWTS+ISG G KEA+ F RMQ G+K + V +S L AC+ G+++
Sbjct: 210 MP--ERNIISWTSMISGCVGAGKPKEALNLFHRMQTAGIKLDNVALVSTLQACADLGVLD 267
Query: 329 EG--LNFFDKMVEECEVLPDIKHYGC-LIDMLGRAGRLEQAEKTALGIPSEITDVVVWRT 385
+G ++ + K E E+ P + GC LIDM + G LE+A + + E V VW
Sbjct: 268 QGKWIHAYIKK-HEIEIDPIL---GCVLIDMYAKCGDLEEAIEVFRKM--EEKGVSVWTA 321
Query: 386 LLGACSFHG 394
++ + HG
Sbjct: 322 MISGYAIHG 330
>gi|449479818|ref|XP_004155716.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08510-like [Cucumis sativus]
Length = 512
Score = 303 bits (777), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 160/422 (37%), Positives = 252/422 (59%), Gaps = 11/422 (2%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNL 92
L+N + +S P + +LLY Q+ + SP + ++++FL CA+L +
Sbjct: 49 LYNKFIQTFSSIGHPHRCWLLYCQM---CSQGCSP-----NQYSFTFLFPACASLFNVYP 100
Query: 93 GTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVK 152
G LH+ K GF S ++ TAL++MY LG L+ + +LFDEMP R++ TWN +I G +
Sbjct: 101 GQMLHSHFCKSGFASDMFAMTALLDMYAKLGMLRSARQLFDEMPVRDIPTWNSLIAGYAR 160
Query: 153 WGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILA 212
G +E A LF +MP RNV+SWT +I GY + + +AL +F + + T+P+E++I +
Sbjct: 161 SGHMEAALELFNKMPVRNVISWTALISGYAQNGKYAKALEMFIGLENEKGTKPNEVSIAS 220
Query: 213 VLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVE 272
VLPA Q G + + I Y GF + V N +++ +A+CG I A ++F++I +
Sbjct: 221 VLPACSQLGALDIGKRIEAYARNNGFFK-NAYVSNAVLELHARCGNIEEAQQVFDEIGSK 279
Query: 273 RKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLN 332
R NL SW ++I G A+HG +A++ + +M ++P+ VTF+ +L AC+HGG+V EG
Sbjct: 280 R-NLCSWNTMIMGLAVHGRCIDALQLYDQMLIRKMRPDDVTFVGLLLACTHGGMVAEGRQ 338
Query: 333 FFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSF 392
F+ M + +V P ++HYGCL+D+LGRAG L++A +P D V+W TLLGACSF
Sbjct: 339 LFESMESKFQVAPKLEHYGCLVDLLGRAGELQEAYNLIQNMPMA-PDSVIWGTLLGACSF 397
Query: 393 HGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCS 452
HGNVE+GE + ++E G+YV++ NI A G + RLR++M + K G S
Sbjct: 398 HGNVELGEVAAESLFKLEPWNPGNYVILSNIYALAGDWSGVARLRKMMKGGHITKRAGYS 457
Query: 453 LV 454
+
Sbjct: 458 YI 459
>gi|449449649|ref|XP_004142577.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08510-like [Cucumis sativus]
Length = 589
Score = 303 bits (777), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 160/422 (37%), Positives = 252/422 (59%), Gaps = 11/422 (2%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNL 92
L+N + +S P + +LLY Q+ + SP + ++++FL CA+L +
Sbjct: 49 LYNKFIQTFSSIGHPHRCWLLYCQM---CSQGCSP-----NQYSFTFLFPACASLFNVYP 100
Query: 93 GTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVK 152
G LH+ K GF S ++ TAL++MY LG L+ + +LFDEMP R++ TWN +I G +
Sbjct: 101 GQMLHSHFCKSGFASDMFAMTALLDMYAKLGMLRSARQLFDEMPVRDIPTWNSLIAGYAR 160
Query: 153 WGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILA 212
G +E A LF +MP RNV+SWT +I GY + + +AL +F + + T+P+E++I +
Sbjct: 161 SGHMEAALELFNKMPVRNVISWTALISGYAQNGKYAKALEMFIGLENEKGTKPNEVSIAS 220
Query: 213 VLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVE 272
VLPA Q G + + I Y GF + V N +++ +A+CG I A ++F++I +
Sbjct: 221 VLPACSQLGALDIGKRIEAYARNNGFFK-NAYVSNAVLELHARCGNIEEAQQVFDEIGSK 279
Query: 273 RKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLN 332
R NL SW ++I G A+HG +A++ + +M ++P+ VTF+ +L AC+HGG+V EG
Sbjct: 280 R-NLCSWNTMIMGLAVHGRCIDALQLYDQMLIRKMRPDDVTFVGLLLACTHGGMVAEGRQ 338
Query: 333 FFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSF 392
F+ M + +V P ++HYGCL+D+LGRAG L++A +P D V+W TLLGACSF
Sbjct: 339 LFESMESKFQVAPKLEHYGCLVDLLGRAGELQEAYNLIQNMPMA-PDSVIWGTLLGACSF 397
Query: 393 HGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCS 452
HGNVE+GE + ++E G+YV++ NI A G + RLR++M + K G S
Sbjct: 398 HGNVELGEVAAESLFKLEPWNPGNYVILSNIYALAGDWSGVARLRKMMKGGHITKRAGYS 457
Query: 453 LV 454
+
Sbjct: 458 YI 459
>gi|255578276|ref|XP_002530005.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223530484|gb|EEF32367.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 499
Score = 303 bits (777), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 177/483 (36%), Positives = 279/483 (57%), Gaps = 38/483 (7%)
Query: 3 ILQNSQTPNNITTQIHSHLLTTNSLLHHSQLFNTLLHFYSLAES-------------PQK 49
I +N Q+ N++ QIH+H L T+ L +HS + +L F +++ S PQ
Sbjct: 22 IAENCQSMNHLK-QIHAHSLLTD-LHNHSVILGKMLRFAAVSPSGDLPYAQRLFDQMPQP 79
Query: 50 AFLLYKQLQQIYTHSHSP--LPPLF----------DSFTYSFLIRTCATL----SHPNL- 92
Y + + Y S SP LF D FT++FLI+ + + + P+
Sbjct: 80 NTFFYNTIIRGYAKSSSPSYCVNLFNQMRQNHVDPDEFTFNFLIKARSRVHKVHNFPSTL 139
Query: 93 -GTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLV 151
++H + K GF SH++V AL+N+Y G + ++F+E ++V+W+ ++ V
Sbjct: 140 ECDEIHGAVFKYGFCSHLFVQNALINLYAVKGSPAAAWRVFNETVGVDVVSWSGLVLAHV 199
Query: 152 KWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITIL 211
+ GELE AR +F++MP ++VVSWT ++ GY++ N S EAL LF +M P E+TI+
Sbjct: 200 RGGELELARQVFDDMPEKDVVSWTAMVSGYSKANCSREALELFWEMSDAG-IRPDEVTIV 258
Query: 212 AVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISV 271
+V+ A GDV++ +H Y + GF + + + N LI+ YAKCGC+ A ++F ++
Sbjct: 259 SVISACTNLGDVETGMNVHSYINENGF-GWMVSLCNALINMYAKCGCVDRAWRVFNNM-- 315
Query: 272 ERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGL 331
+RK+L++W S+IS A HG ++A E F M G+ P+ +TFL++L A +H GLV+EG
Sbjct: 316 KRKSLITWNSMISACANHGYAEDAFELFSCMLNSGIAPDGITFLALLIAYTHKGLVDEGY 375
Query: 332 NFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACS 391
F M + + I+HYGC++DMLGRAGRLE+A + + +P D +VW LL AC
Sbjct: 376 RLFQIMERDYGIEASIEHYGCIVDMLGRAGRLEEAYELIVTMPIPSND-IVWGALLAACR 434
Query: 392 FHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGC 451
+G+V MGERV +K+LE++ GG Y+L+ +I GR +A +R+ M E A K PG
Sbjct: 435 IYGDVNMGERVVKKLLELKPDEGGYYILLRDIYVASGRTAEANHIRQAMQESGAMKNPGY 494
Query: 452 SLV 454
S V
Sbjct: 495 SWV 497
>gi|297839333|ref|XP_002887548.1| hypothetical protein ARALYDRAFT_339650 [Arabidopsis lyrata subsp.
lyrata]
gi|297333389|gb|EFH63807.1| hypothetical protein ARALYDRAFT_339650 [Arabidopsis lyrata subsp.
lyrata]
Length = 1221
Score = 303 bits (776), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 161/456 (35%), Positives = 265/456 (58%), Gaps = 48/456 (10%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQ---IYTHSHSPLPPLFDSFTYSFLIRTCATLSH 89
+FNTL+ YS ++ P + ++ ++ + I+ DSF+++F+++ A
Sbjct: 239 MFNTLVRGYSESDEPHNSVAVFVEMMRKGFIFP----------DSFSFAFVVKAAANFRS 288
Query: 90 PNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLV-------- 141
G Q+H K G SH++V T L+ MY G + + K+FDEMP+ NLV
Sbjct: 289 LRTGFQMHCQALKHGLDSHLFVATTLIGMYGECGCVGFARKVFDEMPQPNLVAWNAVVTA 348
Query: 142 -----------------------TWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGII 178
+WNVM+ G +K GELE A+ +F EMP R+ VSW+ +I
Sbjct: 349 CFRGNDVSGAREIFDKMLVRNHTSWNVMLAGYIKAGELECAKRIFSEMPHRDDVSWSTMI 408
Query: 179 DGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGF 238
G++ NE+ + FR+++ E P+E+++ VL A Q+G + + +HG+ EK G+
Sbjct: 409 VGFSHNGSFNESFSYFRELLRAE-MRPNEVSLTGVLSACSQSGAFEFGKTLHGFVEKSGY 467
Query: 239 TAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVEN 298
+ + + V N LID Y++CG + A +FE + E++++VSWTS+I+G AMHG G+EA+
Sbjct: 468 S-WIVSVNNALIDMYSRCGNVPMARLVFEGMQ-EKRSIVSWTSMIAGLAMHGHGEEAIRI 525
Query: 299 FGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLG 358
F M + G+ P+ ++F+S+L ACSH GL++EG +F KM + P ++HYGC++D+ G
Sbjct: 526 FNEMTESGVMPDEISFISLLYACSHAGLIKEGEGYFSKMKRVYHIEPAVEHYGCMVDLYG 585
Query: 359 RAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYV 418
R+G+L++A +P T +VWRTLLGACS HGN+E+ E+V +++ E++ GD V
Sbjct: 586 RSGKLQKAYSFICQMPIPPT-AIVWRTLLGACSSHGNIELAEQVKQRLNELDPNNSGDLV 644
Query: 419 LMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
L+ N+ A G++ D +R+ M + K+ SLV
Sbjct: 645 LLSNVYATAGKWKDVASIRKSMIVQRIKKITAWSLV 680
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 77/370 (20%), Positives = 142/370 (38%), Gaps = 86/370 (23%)
Query: 156 LEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLP 215
L +AR L P + + ++ GY+ + + ++A+F +M+ + P + V+
Sbjct: 222 LPYARRLLLCFPEPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFIFPDSFSFAFVVK 281
Query: 216 AIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFE-------- 267
A +++ +H K G + + V LI Y +CGC+ A K+F+
Sbjct: 282 AAANFRSLRTGFQMHCQALKHGLDSH-LFVATTLIGMYGECGCVGFARKVFDEMPQPNLV 340
Query: 268 -------------DISVER--------KNLVSWTSIISGFAMHGMGKEAVENFGRMQKVG 306
D+S R +N SW +++G+ G + A F M
Sbjct: 341 AWNAVVTACFRGNDVSGAREIFDKMLVRNHTSWNVMLAGYIKAGELECAKRIFSEM---- 396
Query: 307 LKPNR--VTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPD------------------ 346
P+R V++ +++ SH G E ++F +++ E+ P+
Sbjct: 397 --PHRDDVSWSTMIVGFSHNGSFNESFSYFRELL-RAEMRPNEVSLTGVLSACSQSGAFE 453
Query: 347 -----------------IKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGA 389
+ LIDM R G + A G+ E +V W +++
Sbjct: 454 FGKTLHGFVEKSGYSWIVSVNNALIDMYSRCGNVPMARLVFEGM-QEKRSIVSWTSMIAG 512
Query: 390 CSFHGNVEMGERVTRKILEM-ERGYGGDYVLMYNIL-----AGVGRFGDA--ERLRRVMD 441
+ HG+ GE R EM E G D + ++L AG+ + G+ +++RV
Sbjct: 513 LAMHGH---GEEAIRIFNEMTESGVMPDEISFISLLYACSHAGLIKEGEGYFSKMKRVYH 569
Query: 442 ERNAFKVPGC 451
A + GC
Sbjct: 570 IEPAVEHYGC 579
>gi|297740547|emb|CBI30729.3| unnamed protein product [Vitis vinifera]
Length = 506
Score = 301 bits (772), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 156/426 (36%), Positives = 250/426 (58%), Gaps = 14/426 (3%)
Query: 30 HSQLFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSH 89
+S ++NT++ Y+ + +P+ A ++ Q+ H+ + P D +T++F +++C + S
Sbjct: 72 NSYMWNTIIRAYANSPTPEAALTIFHQML------HASVLP--DKYTFTFALKSCGSFSG 123
Query: 90 PNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITG 149
G Q+H + K G +++ L+++Y S G ++D+ L D M ER++V+WN +++
Sbjct: 124 VEEGRQIHGHVLKTGLGDDLFIQNTLIHLYASCGCIEDARHLLDRMLERDVVSWNALLSA 183
Query: 150 LVKWGELEFA-RSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEI 208
+ G +E A R +F E P +NVVSW +I GY+ R +E L LF M +P
Sbjct: 184 YAERGLMELASRRVFGETPVKNVVSWNAMITGYSHAGRFSEVLVLFEDMQHAG-VKPDNC 242
Query: 209 TILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFED 268
T+++VL A G + + +H Y +K G + D V L+D Y+KCG I A ++F
Sbjct: 243 TLVSVLSACAHVGALSQGEWVHAYIDKNGIS-IDGFVATALVDMYSKCGSIEKALEVFN- 300
Query: 269 ISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVE 328
S RK++ +W SIISG + HG G+ A++ F M G KPN VTF+ VL+ACS GL++
Sbjct: 301 -SCLRKDISTWNSIISGLSTHGSGQHALQIFSEMLVEGFKPNEVTFVCVLSACSRAGLLD 359
Query: 329 EGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLG 388
EG F+ MV + P I+HYGC++D+LGR G LE+AE+ +P + VVW +LLG
Sbjct: 360 EGREMFNLMVHVHGIQPTIEHYGCMVDLLGRVGLLEEAEELVQKMPQKEAS-VVWESLLG 418
Query: 389 ACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKV 448
AC HGNVE+ ERV +K+LE+ +V + N+ A +GR+ D +R+ M + K
Sbjct: 419 ACRNHGNVELAERVAQKLLELSPQESSSFVQLSNMYASMGRWKDVMEVRQKMRAQGVRKD 478
Query: 449 PGCSLV 454
PGCS++
Sbjct: 479 PGCSMI 484
>gi|224061246|ref|XP_002300388.1| predicted protein [Populus trichocarpa]
gi|222847646|gb|EEE85193.1| predicted protein [Populus trichocarpa]
Length = 514
Score = 301 bits (772), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 152/384 (39%), Positives = 242/384 (63%), Gaps = 5/384 (1%)
Query: 71 LFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSK 130
L D+FT SF+++ C LS G +H + K+GF S++++ ++N+Y G + D+
Sbjct: 7 LPDTFTCSFVLKACLKLSDVVNGKTIHGLFQKLGFGSNLFLQNMILNLYGLCGEMGDAML 66
Query: 131 LFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEA 190
LF++MP+R+ VTWN++I L K G+++ A F MP +NV SWT +I G+ + + NEA
Sbjct: 67 LFEKMPQRDAVTWNIVIAQLAKRGDIDGAYGFFLRMPNKNVRSWTSMISGFVQCGKPNEA 126
Query: 191 LALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLI 250
+ LF K+ E P+E+T+++VL A GD+ +++H Y K GF ++ V N LI
Sbjct: 127 IDLFMKLED-EAVRPNEVTVVSVLAACADLGDLDLGRIVHEYSTKSGFKR-NVHVCNTLI 184
Query: 251 DTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPN 310
D Y KCGC+ +A ++F ++ E + +VSW+++I+G AMHG +EA+ F M K+G+KPN
Sbjct: 185 DMYVKCGCLENARRVFYEM--EERTVVSWSAMIAGLAMHGQAEEALCLFSEMIKLGVKPN 242
Query: 311 RVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTA 370
VTF+ +L+ACSH GL++EG FF M + V+P I+HYGC++D+ RAG LE+A +
Sbjct: 243 GVTFIGLLHACSHMGLIDEGRRFFASMTADYGVIPQIEHYGCVVDLFSRAGLLEEAHEFI 302
Query: 371 LGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRF 430
L +P + + VVW LLG C H N+++ E + + E++ G YV++ NI A R+
Sbjct: 303 LSMPIK-PNGVVWGALLGGCKVHKNIDLAEEAIKHLSELDPLNDGYYVVISNIYAEAERW 361
Query: 431 GDAERLRRVMDERNAFKVPGCSLV 454
DA R+R++M +R K G S +
Sbjct: 362 EDAARVRKLMKDRGVKKTSGWSSI 385
>gi|225438894|ref|XP_002279137.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Vitis vinifera]
Length = 628
Score = 301 bits (772), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 160/422 (37%), Positives = 252/422 (59%), Gaps = 17/422 (4%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNL 92
+ ++H ++L ++A Y Q+ T P ++FT+S +++ C
Sbjct: 95 FWTAIIHGHALRGLHEQALNFYAQM---LTQGVEP-----NAFTFSSILKLCPI----EP 142
Query: 93 GTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVK 152
G LH+ K+GF S +YV T L+++Y G + + +LFD MPE++LV+ M+T K
Sbjct: 143 GKALHSQAVKLGFDSDLYVRTGLLDVYARGGDVVSAQQLFDTMPEKSLVSLTAMLTCYAK 202
Query: 153 WGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILA 212
GEL+ AR LF+ M R+ V W +IDGYT+ NEAL LFR+M+ + +P+E+T+L+
Sbjct: 203 HGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRMLKAK-AKPNEVTVLS 261
Query: 213 VLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVE 272
VL A Q G ++S + +H Y E G F++ V L+D Y+KCG + A +F+ I +
Sbjct: 262 VLSACGQLGALESGRWVHSYIENNGIQ-FNVHVGTALVDMYSKCGSLEDARLVFDKI--D 318
Query: 273 RKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLN 332
K++V+W S+I G+AMHG +EA++ F M ++GL P +TF+ +L+AC H G V EG +
Sbjct: 319 DKDVVAWNSMIVGYAMHGFSQEALQLFKSMCRMGLHPTNITFIGILSACGHSGWVTEGWD 378
Query: 333 FFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSF 392
F+KM +E + P I+HYGC++++LGRAG +EQA + + E D V+W TLLGAC
Sbjct: 379 IFNKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQAYELVKNMNIE-PDPVLWGTLLGACRL 437
Query: 393 HGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCS 452
HG + +GE++ +++ G Y+L+ NI A VG + RLR +M + K PGCS
Sbjct: 438 HGKIALGEKIVELLVDQNLANSGTYILLSNIYAAVGNWDGVARLRTMMKDSGVKKEPGCS 497
Query: 453 LV 454
+
Sbjct: 498 SI 499
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 88/317 (27%), Positives = 138/317 (43%), Gaps = 14/317 (4%)
Query: 78 SFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPE 137
+ LI T+SH Q+HAV+ + G H +N L Y SLG L S LF
Sbjct: 34 AVLIDKSKTISHL---LQIHAVLFRHGLDHHPILNFKLQRSYASLGRLDYSVALFGRTQN 90
Query: 138 RNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKM 197
++ W +I G G E A + + +M + V ++ AL +
Sbjct: 91 PSVFFWTAIIHGHALRGLHEQALNFYAQMLTQGVEPNAFTFSSILKLCPIEPGKALHSQA 150
Query: 198 VACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCG 257
V + + +L + GDV S Q + ++ + L ++ YAK G
Sbjct: 151 VKLGFDSDLYVRT-GLLDVYARGGDVVSAQQLFDTMPEKSLVS-----LTAMLTCYAKHG 204
Query: 258 CIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSV 317
+ +A LF+ +E ++ V W +I G+ +GM EA+ F RM K KPN VT LSV
Sbjct: 205 ELDAARVLFD--GMEERDGVCWNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSV 262
Query: 318 LNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEI 377
L+AC G +E G + +E + ++ L+DM + G LE A I +
Sbjct: 263 LSACGQLGALESG-RWVHSYIENNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKIDDK- 320
Query: 378 TDVVVWRTLLGACSFHG 394
DVV W +++ + HG
Sbjct: 321 -DVVAWNSMIVGYAMHG 336
>gi|15239979|ref|NP_201453.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171133|sp|Q9FJY7.1|PP449_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g66520
gi|10177533|dbj|BAB10928.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332010841|gb|AED98224.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 620
Score = 301 bits (771), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 161/423 (38%), Positives = 260/423 (61%), Gaps = 15/423 (3%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNL 92
L+N ++ +S ++ P+++ LLY+++ S +P +++T+ L++ C+ LS
Sbjct: 82 LWNLMIRGFSCSDEPERSLLLYQRM----LCSSAP----HNAYTFPSLLKACSNLSAFEE 133
Query: 93 GTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVK 152
TQ+HA I+K+G+++ VY +L+N Y G K + LFD +PE + V+WN +I G VK
Sbjct: 134 TTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVK 193
Query: 153 WGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILA 212
G+++ A +LF +M +N +SWT +I GY + + + EAL LF +M + EP +++
Sbjct: 194 AGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSD-VEPDNVSLAN 252
Query: 213 VLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNC-LIDTYAKCGCIFSASKLFEDISV 271
L A Q G ++ + IH Y K VL C LID YAKCG + A ++F++I
Sbjct: 253 ALSACAQLGALEQGKWIHSYLNKTRIRMDS--VLGCVLIDMYAKCGEMEEALEVFKNI-- 308
Query: 272 ERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGL 331
++K++ +WT++ISG+A HG G+EA+ F MQK+G+KPN +TF +VL ACS+ GLVEEG
Sbjct: 309 KKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGK 368
Query: 332 NFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACS 391
F M + + P I+HYGC++D+LGRAG L++A++ +P + + V+W LL AC
Sbjct: 369 LIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLK-PNAVIWGALLKACR 427
Query: 392 FHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGC 451
H N+E+GE + ++ ++ +GG YV NI A ++ A RR+M E+ KVPGC
Sbjct: 428 IHKNIELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGC 487
Query: 452 SLV 454
S +
Sbjct: 488 STI 490
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 81/325 (24%), Positives = 145/325 (44%), Gaps = 23/325 (7%)
Query: 95 QLHAVISKVGFQSHVYVNTALVNMYVSL---GFLKDSSKLFDEMPERNLVTWNVMITGLV 151
Q+HA + K G Y T ++ +S FL + +FD + WN+MI G
Sbjct: 32 QIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRPDTFLWNLMIRGFS 91
Query: 152 KWGELEFARSLFEEMPC----RNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSE 207
E E + L++ M C N ++ ++ + ++ E + ++ Y E
Sbjct: 92 CSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQITKLGY-ENDV 150
Query: 208 ITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFE 267
+ +++ + G+ K L+ D N +I Y K G + A LF
Sbjct: 151 YAVNSLINSYAVTGNFKLAHLLFDR-----IPEPDDVSWNSVIKGYVKAGKMDIALTLFR 205
Query: 268 DISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLV 327
++ KN +SWT++ISG+ M KEA++ F MQ ++P+ V+ + L+AC+ G +
Sbjct: 206 KMA--EKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGAL 263
Query: 328 EEGLNFFDKMVEECEVLPDIKHYGC-LIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTL 386
E+G + + + + D GC LIDM + G +E+A + I + V W L
Sbjct: 264 EQG-KWIHSYLNKTRIRMD-SVLGCVLIDMYAKCGEMEEALEVFKNIKKK--SVQAWTAL 319
Query: 387 LGACSFHGNVEMGERVTRKILEMER 411
+ ++HG+ G K +EM++
Sbjct: 320 ISGYAYHGH---GREAISKFMEMQK 341
>gi|297793123|ref|XP_002864446.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297310281|gb|EFH40705.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 531
Score = 301 bits (771), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 162/439 (36%), Positives = 264/439 (60%), Gaps = 12/439 (2%)
Query: 18 HSHLLTTNSLLHHSQLFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTY 77
+++ + T+ ++ L NT++ SL + + ++ + P D+FT+
Sbjct: 65 YAYSVFTHQPFPNTYLHNTMIRALSLVDERNAHSIAITVYRKFWAFCAKP-----DTFTF 119
Query: 78 SFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPE 137
F+++ +S G Q+H GF S V+V T L+ MY S G L D+ K+FDEM
Sbjct: 120 PFVLKIVVRVSDVWFGRQVHGQAVVFGFDSSVHVVTGLIQMYSSCGGLGDARKVFDEMRV 179
Query: 138 RNLVTWNVMITGLVKWGELEFARSLFEEMPC--RNVVSWTGIIDGYTRMNRSNEALALFR 195
R++ WN ++ G K GE++ AR L E MPC RN VSWT +I GY R R++EA+ +F+
Sbjct: 180 RDVNVWNALLAGYGKVGEMDEARGLLEMMPCWVRNAVSWTCVISGYARSGRASEAIEVFQ 239
Query: 196 KMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAK 255
+M+ E +P E+T+LAVL A G ++ + I Y + RG + + N +ID YAK
Sbjct: 240 RML-MENVDPDEVTLLAVLSACADLGSLELGERICSYVDHRGMNR-AVSLNNAVIDMYAK 297
Query: 256 CGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFL 315
G I A ++FE SV +N+V+WT+II+G A HG G EA+ F RM K G+KPN VTF+
Sbjct: 298 SGNITKALEVFE--SVNERNVVTWTTIITGLATHGHGAEALVMFDRMVKAGVKPNDVTFI 355
Query: 316 SVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPS 375
++L+ACSH G V+ G FF+ M + + P+I+HYGC+ID+LGRAG+L +AE+ +P
Sbjct: 356 AILSACSHVGWVDLGNRFFNSMRSKYGINPNIEHYGCMIDLLGRAGKLREAEEVIKSMPF 415
Query: 376 EITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAER 435
E ++ +W +LL A + H ++++GER +++++E G+Y+L+ N+ + +GR+ ++
Sbjct: 416 E-SNAAIWGSLLAASNVHHDIDVGERALYQLIKLEPNNSGNYMLLANLYSNLGRWDESRM 474
Query: 436 LRRVMDERNAFKVPGCSLV 454
+R++M K+ G S +
Sbjct: 475 MRKMMKGIGVKKLAGESSI 493
>gi|255564780|ref|XP_002523384.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223537334|gb|EEF38963.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 538
Score = 301 bits (771), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 161/424 (37%), Positives = 257/424 (60%), Gaps = 16/424 (3%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNL 92
L+NT++ SL+ P + L+ ++Q + L P DS+++ F ++ LS
Sbjct: 77 LYNTIIRALSLSPQPSLSIFLFNRIQS------ARLRP--DSYSFPFALKAVIRLSATKT 128
Query: 93 GTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMP--ERNLVTWNVMITGL 150
G Q H+ + G SH++V +L+ MY S + D+ KLFD +P RN+ WN M+T
Sbjct: 129 GLQFHSQAIRFGLHSHLHVLVSLIRMYSS-SHISDARKLFDGIPLTARNVALWNAMLTSY 187
Query: 151 VKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITI 210
K ++ A+ LF+ MP RN++SWT +I GY +NR ++A+A+FR M + P EIT+
Sbjct: 188 AKICDMPNAQHLFDSMPQRNLISWTALISGYAHINRPHQAIAIFRTM-QLQNVVPDEITL 246
Query: 211 LAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDIS 270
LAVL A Q G ++ + I Y + G ++ + N LID YAK G I A +FE S
Sbjct: 247 LAVLSACAQLGALELGEWIRNYIDIHGLHR-NVPLHNALIDMYAKSGNIKRALLIFE--S 303
Query: 271 VERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEG 330
++ K +V+WT++I+G A+HG+G +A+E F RM++ +KPN +TF++VL+ACSH GLV+
Sbjct: 304 MKHKTIVTWTTMIAGLALHGLGTQALEMFSRMERDRVKPNEITFIAVLSACSHVGLVQLA 363
Query: 331 LNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGAC 390
+FF M + P I+HYGC+ID+LGRAG L++A++ +P E + +W +LL A
Sbjct: 364 RSFFTNMRSRYTIQPKIEHYGCMIDLLGRAGYLQEAQQLLQQMPFE-PNAAIWGSLLAAS 422
Query: 391 SFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPG 450
HG+ +GER + ++E+E G+Y L+ NI A +GR+ + +R++M +R K+PG
Sbjct: 423 YTHGDAMLGERTLKHLIELEPNNSGNYALLSNIYASLGRWKASRIVRKMMRDRGVKKIPG 482
Query: 451 CSLV 454
S +
Sbjct: 483 GSFI 486
>gi|359476090|ref|XP_003631788.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g20540-like [Vitis vinifera]
Length = 515
Score = 301 bits (770), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 155/422 (36%), Positives = 253/422 (59%), Gaps = 8/422 (1%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNL 92
L+N ++ Y + A ++KQ+ HSH P D FT+ F+++ CA L NL
Sbjct: 53 LYNAMIRAYKHNKVYILAITVHKQM---LGHSHGENPXFPDKFTFPFVVKXCAGLMCYNL 109
Query: 93 GTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVK 152
G Q+H K G +S+ + +LV MYV L D+ ++F+EM ER+ V+WN +I+G V+
Sbjct: 110 GKQVHGHAFKFGPKSNTVIENSLVEMYVKCDSLDDAHRVFEEMTERDAVSWNTLISGHVR 169
Query: 153 WGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILA 212
G++ AR++FEE+ + + SWT I+ GY R+ AL FR+M + E EI++++
Sbjct: 170 LGQMRRARAIFEELQDKTIFSWTAIVSGYARIGCHAVALEFFRRMQMVD-IELDEISLVS 228
Query: 213 VLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVE 272
VLPA Q G ++ + IH Y +K GF DI V N LI+ YAK G + +LF ++
Sbjct: 229 VLPACAQLGALELGKWIHIYADKAGFLR-DICVCNALIEVYAKRGSMDEGRRLFHKMN-- 285
Query: 273 RKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLN 332
++++SW+++I G A HG +EA+E F MQK ++PN +TF+ +L+AC+H GL+ EGL
Sbjct: 286 ERDVISWSTMIVGLANHGRAREAIELFQEMQKAKVEPNIITFVGLLSACAHAGLLNEGLG 345
Query: 333 FFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSF 392
+F+ M + + P ++HYGCL+++LG +GRL+QA + +P + D +W L +C
Sbjct: 346 YFESMERDDNIEPGVEHYGCLVNLLGLSGRLDQALELIKKMPMK-PDSDIWGLLSSSCRS 404
Query: 393 HGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCS 452
HGN+E+ +LE+E G+Y+ + N+ A +G++ R+R++M + K PGCS
Sbjct: 405 HGNLEIVAIAMEHLLELEPDDTGNYITLSNLYADLGKWDGVSRMRKLMSSKYMNKTPGCS 464
Query: 453 LV 454
+
Sbjct: 465 SI 466
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 120/279 (43%), Gaps = 47/279 (16%)
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
GE E+A LF+ + N + +I Y A+ + ++M+ + E
Sbjct: 34 GETEYANLLFKRVADPNAFLYNAMIRAYKHNKVYILAITVHKQMLGHSHGENPXFPDKFT 93
Query: 214 LPAIWQNGDVKSC---------QLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASK 264
P + VK C + +HG+ K G + + + N L++ Y KC + A +
Sbjct: 94 FPFV-----VKXCAGLMCYNLGKQVHGHAFKFGPKSNTV-IENSLVEMYVKCDSLDDAHR 147
Query: 265 LFEDIS-----------------------------VERKNLVSWTSIISGFAMHGMGKEA 295
+FE+++ ++ K + SWT+I+SG+A G A
Sbjct: 148 VFEEMTERDAVSWNTLISGHVRLGQMRRARAIFEELQDKTIFSWTAIVSGYARIGCHAVA 207
Query: 296 VENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLID 355
+E F RMQ V ++ + ++ +SVL AC+ G +E G + ++ L DI LI+
Sbjct: 208 LEFFRRMQMVDIELDEISLVSVLPACAQLGALELG-KWIHIYADKAGFLRDICVCNALIE 266
Query: 356 MLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHG 394
+ + G +++ + + DV+ W T++ + HG
Sbjct: 267 VYAKRGSMDEGRRLFHKMNER--DVISWSTMIVGLANHG 303
>gi|449457225|ref|XP_004146349.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like [Cucumis sativus]
Length = 781
Score = 300 bits (768), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 161/424 (37%), Positives = 255/424 (60%), Gaps = 16/424 (3%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+N ++ Y + A ++++QQ + P D T + C L + LG
Sbjct: 312 WNVMISGYVRCRRFEDAINTFREMQQ--EGNEKP-----DEATVVSTLSACTALKNLELG 364
Query: 94 TQLHAVISK-VGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVK 152
++H + K +GF + + + AL++MY G L + +FDEM +N++ W MI+G +
Sbjct: 365 DEIHNYVRKELGFTTRI--DNALLDMYAKCGCLNIARNIFDEMSMKNVICWTSMISGYIN 422
Query: 153 WGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILA 212
G+L AR LF++ P R+VV WT +I+GY + + ++A+ALFR+M + +P + T++
Sbjct: 423 CGDLREARDLFDKSPVRDVVLWTAMINGYVQFHHFDDAVALFREM-QIQRVKPDKFTVVT 481
Query: 213 VLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVE 272
+L Q G ++ + IHGY ++ T D+ V LI+ Y+KCGC+ + ++F ++ E
Sbjct: 482 LLTGCAQLGALEQGKWIHGYLDENRIT-MDVVVGTALIEMYSKCGCVDKSLEIFYEL--E 538
Query: 273 RKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLN 332
K+ SWTSII G AM+G EA+ F M++VG KP+ +TF+ VL+ACSHGGLVEEG
Sbjct: 539 DKDTASWTSIICGLAMNGKTSEALRLFSEMERVGAKPDDITFIGVLSACSHGGLVEEGRR 598
Query: 333 FFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVV--WRTLLGAC 390
FF+ M + + P ++HYGC+ID+LGRAG L++AE+ IP E ++VV + LL AC
Sbjct: 599 FFNSMKKVHRIEPKVEHYGCVIDLLGRAGLLDEAEELIQEIPIENCEIVVPLYGALLSAC 658
Query: 391 SFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPG 450
H NV+MGER+ +K+ +E + L+ NI A V R+ DA+++RR M E K+PG
Sbjct: 659 RIHNNVDMGERLAKKLENIESCDSSIHTLLANIYASVDRWEDAKKVRRKMKELGVKKMPG 718
Query: 451 CSLV 454
CSL+
Sbjct: 719 CSLI 722
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 113/439 (25%), Positives = 192/439 (43%), Gaps = 83/439 (18%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNL 92
++N ++ Y+ +K LL++QL++ L P D FTY F+++ L
Sbjct: 210 VYNVMVKMYAKRGILRKVLLLFQQLRE------DGLWP--DGFTYPFVLKAIGCLRDVRQ 261
Query: 93 GTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVK 152
G ++ I K G YV +L++MY L
Sbjct: 262 GEKVRGFIVKTGMDLDNYVYNSLIDMYYELS----------------------------- 292
Query: 153 WGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILA 212
+E A+ LF+EM R+ VSW +I GY R R +A+ FR+M +P E T+++
Sbjct: 293 --NVENAKKLFDEMTTRDSVSWNVMISGYVRCRRFEDAINTFREMQQEGNEKPDEATVVS 350
Query: 213 VLPAIWQNGDVKSCQLIHGYGEKR-GFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISV 271
L A +++ IH Y K GFT R+ N L+D YAKCGC+ A +F+++S+
Sbjct: 351 TLSACTALKNLELGDEIHNYVRKELGFTT---RIDNALLDMYAKCGCLNIARNIFDEMSM 407
Query: 272 ERKNLVSWTSIISGFAMHGMGKEAVENFGR------------------------------ 301
KN++ WTS+ISG+ G +EA + F +
Sbjct: 408 --KNVICWTSMISGYINCGDLREARDLFDKSPVRDVVLWTAMINGYVQFHHFDDAVALFR 465
Query: 302 -MQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRA 360
MQ +KP++ T +++L C+ G +E+G + ++E + D+ LI+M +
Sbjct: 466 EMQIQRVKPDKFTVVTLLTGCAQLGALEQG-KWIHGYLDENRITMDVVVGTALIEMYSKC 524
Query: 361 GRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMER-GYGGDYVL 419
G ++++ + + E D W +++ + +G R+ EMER G D +
Sbjct: 525 GCVDKSLEIFYEL--EDKDTASWTSIICGLAMNGKTSEALRL---FSEMERVGAKPDDIT 579
Query: 420 MYNILAGVGRFGDAERLRR 438
+L+ G E RR
Sbjct: 580 FIGVLSACSHGGLVEEGRR 598
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 77/314 (24%), Positives = 135/314 (42%), Gaps = 49/314 (15%)
Query: 81 IRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYV--SLGFLKDSSKLFDEMPER 138
+R C ++ Q+ + I ++G + L+ SLG L+ + K+F+ + +
Sbjct: 150 LRNCKSMDQLK---QIQSQIFRIGLEGDRDTINKLMAFCADSSLGNLRYAEKIFNYVQDP 206
Query: 139 NLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMV 198
+L +NVM+ K G L LF+++ R W
Sbjct: 207 SLFVYNVMVKMYAKRGILRKVLLLFQQL--REDGLW------------------------ 240
Query: 199 ACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGC 258
P T VL AI DV+ + + G+ K G D V N LID Y +
Sbjct: 241 ------PDGFTYPFVLKAIGCLRDVRQGEKVRGFIVKTGMD-LDNYVYNSLIDMYYELSN 293
Query: 259 IFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVG-LKPNRVTFLSV 317
+ +A KLF++++ ++ VSW +ISG+ ++A+ F MQ+ G KP+ T +S
Sbjct: 294 VENAKKLFDEMTT--RDSVSWNVMISGYVRCRRFEDAINTFREMQQEGNEKPDEATVVST 351
Query: 318 LNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEI 377
L+AC+ +E G + + +E I + L+DM + G L A I E+
Sbjct: 352 LSACTALKNLELGDEIHNYVRKELGFTTRIDN--ALLDMYAKCGCL----NIARNIFDEM 405
Query: 378 T--DVVVWRTLLGA 389
+ +V+ W +++
Sbjct: 406 SMKNVICWTSMISG 419
>gi|294463969|gb|ADE77505.1| unknown [Picea sitchensis]
Length = 514
Score = 300 bits (768), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 159/382 (41%), Positives = 234/382 (61%), Gaps = 5/382 (1%)
Query: 73 DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLF 132
+ FT S +++ CA+++ G Q H I K+GF+S V V TALV+MY G L+D+ +F
Sbjct: 9 NQFTLSTVVKACASIASLEQGKQAHNYIIKMGFESDVVVQTALVHMYARCGSLEDAGHVF 68
Query: 133 DEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALA 192
D+M ER+ TWN MITG + +++ A LF EM R+VVSWT +I GY + +E+L
Sbjct: 69 DKMSERSTRTWNAMITGHAQNRDMKKALKLFYEMSERDVVSWTAVIAGYAQNGYGDESLN 128
Query: 193 LFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDT 252
+F +M + + +VL A ++ + H Y + GF A DI V + L+D
Sbjct: 129 VFNQMRKTG-MKSDRFIMGSVLSACADLAALELGRQFHAYVVQSGF-ALDIVVGSALVDM 186
Query: 253 YAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRV 312
YAK G + A ++F+ + ++N VSW SII+G A HG G +AV F +M + G+KPN +
Sbjct: 187 YAKSGSMEDACQVFDKMP--QRNEVSWNSIITGCAQHGRGNDAVLLFEQMLQAGIKPNEI 244
Query: 313 TFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALG 372
+F+ VL+ACSH GLV EG +F+ M + ++PD+ HY C+ID+LGRAG L++AE G
Sbjct: 245 SFVGVLSACSHTGLVNEGRGYFNLMTQNYGIVPDVSHYTCMIDLLGRAGCLDEAENFING 304
Query: 373 IPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGD 432
+P E DV VW LLGAC HGN E+ +R+ +L ME G YVL+ NI A G++ D
Sbjct: 305 MPVE-PDVSVWGALLGACRIHGNTELAKRIAEHLLGMEVQIAGIYVLLSNIYAAAGQWDD 363
Query: 433 AERLRRVMDERNAFKVPGCSLV 454
A ++R++M +R K PG S +
Sbjct: 364 AAKVRKLMKDRGVMKQPGYSWI 385
>gi|449521645|ref|XP_004167840.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like, partial [Cucumis sativus]
Length = 735
Score = 300 bits (768), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 161/424 (37%), Positives = 255/424 (60%), Gaps = 16/424 (3%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+N ++ Y + A ++++QQ + P D T + C L + LG
Sbjct: 266 WNVMISGYVRCRRFEDAINTFREMQQ--EGNEKP-----DEATVVSTLSACTALKNLELG 318
Query: 94 TQLHAVISK-VGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVK 152
++H + K +GF + + + AL++MY G L + +FDEM +N++ W MI+G +
Sbjct: 319 DEIHNYVRKELGFTTRI--DNALLDMYAKCGCLNIARNIFDEMSMKNVICWTSMISGYIN 376
Query: 153 WGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILA 212
G+L AR LF++ P R+VV WT +I+GY + + ++A+ALFR+M + +P + T++
Sbjct: 377 CGDLREARDLFDKSPVRDVVLWTAMINGYVQFHHFDDAVALFREM-QIQKIKPDKFTVVT 435
Query: 213 VLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVE 272
+L Q G ++ + IHGY ++ T D+ V LI+ Y+KCGC+ + ++F ++ E
Sbjct: 436 LLTGCAQLGALEQGKWIHGYLDENRIT-MDVVVGTALIEMYSKCGCVDKSLEIFYEL--E 492
Query: 273 RKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLN 332
K+ SWTSII G AM+G EA+ F M++VG KP+ +TF+ VL+ACSHGGLVEEG
Sbjct: 493 DKDTASWTSIICGLAMNGKTSEALRLFSEMERVGAKPDDITFIGVLSACSHGGLVEEGRR 552
Query: 333 FFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVV--WRTLLGAC 390
FF+ M + + P ++HYGC+ID+LGRAG L++AE+ IP E ++VV + LL AC
Sbjct: 553 FFNSMKKVHRIEPKVEHYGCVIDLLGRAGLLDEAEELIQEIPIENCEIVVPLYGALLSAC 612
Query: 391 SFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPG 450
H NV+MGER+ +K+ +E + L+ NI A V R+ DA+++RR M E K+PG
Sbjct: 613 RIHNNVDMGERLAKKLENIESCDSSIHTLLANIYASVDRWEDAKKVRRKMKELGVKKMPG 672
Query: 451 CSLV 454
CSL+
Sbjct: 673 CSLI 676
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 113/439 (25%), Positives = 191/439 (43%), Gaps = 83/439 (18%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNL 92
++N ++ Y+ +K LL++QL++ L P D FTY F+++ L
Sbjct: 164 VYNVMVKIYAKRGILRKVLLLFQQLRE------DGLWP--DGFTYPFVLKAIGCLRDVRQ 215
Query: 93 GTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVK 152
G ++ I K G YV +L++MY L
Sbjct: 216 GEKVRGFIVKTGMDLDNYVYNSLIDMYYELS----------------------------- 246
Query: 153 WGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILA 212
+E A+ LF+EM R+ VSW +I GY R R +A+ FR+M +P E T+++
Sbjct: 247 --NVENAKKLFDEMTTRDSVSWNVMISGYVRCRRFEDAINTFREMQQEGNEKPDEATVVS 304
Query: 213 VLPAIWQNGDVKSCQLIHGYGEKR-GFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISV 271
L A +++ IH Y K GFT R+ N L+D YAKCGC+ A +F+++S+
Sbjct: 305 TLSACTALKNLELGDEIHNYVRKELGFTT---RIDNALLDMYAKCGCLNIARNIFDEMSM 361
Query: 272 ERKNLVSWTSIISGFAMHGMGKEAVENFGR------------------------------ 301
KN++ WTS+ISG+ G +EA + F +
Sbjct: 362 --KNVICWTSMISGYINCGDLREARDLFDKSPVRDVVLWTAMINGYVQFHHFDDAVALFR 419
Query: 302 -MQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRA 360
MQ +KP++ T +++L C+ G +E+G + ++E + D+ LI+M +
Sbjct: 420 EMQIQKIKPDKFTVVTLLTGCAQLGALEQG-KWIHGYLDENRITMDVVVGTALIEMYSKC 478
Query: 361 GRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMER-GYGGDYVL 419
G ++++ + + E D W +++ + +G R EMER G D +
Sbjct: 479 GCVDKSLEIFYEL--EDKDTASWTSIICGLAMNGKT---SEALRLFSEMERVGAKPDDIT 533
Query: 420 MYNILAGVGRFGDAERLRR 438
+L+ G E RR
Sbjct: 534 FIGVLSACSHGGLVEEGRR 552
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 86/350 (24%), Positives = 146/350 (41%), Gaps = 66/350 (18%)
Query: 62 THSHSPL-------PPLFDSFTYSFL----------IRTCATLSHPNLGTQLHAVISKVG 104
HS SP+ P F S + S L +R C ++ Q+ + I ++G
Sbjct: 68 NHSKSPVYIPSFFFKPPFSSSSASNLQTNKKSCIECLRNCKSMDQLK---QIQSQIFRIG 124
Query: 105 FQSHVYVNTALVNMYV--SLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSL 162
+ L+ SLG L+ + K+F+ + + +L +NVM+ K G L L
Sbjct: 125 LEGDRDTINKLMAFCADSSLGNLRYAEKIFNYVQDPSLFVYNVMVKIYAKRGILRKVLLL 184
Query: 163 FEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGD 222
F+++ R W P T VL AI D
Sbjct: 185 FQQL--REDGLW------------------------------PDGFTYPFVLKAIGCLRD 212
Query: 223 VKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSI 282
V+ + + G+ K G D V N LID Y + + +A KLF++++ ++ VSW +
Sbjct: 213 VRQGEKVRGFIVKTGMD-LDNYVYNSLIDMYYELSNVENAKKLFDEMTT--RDSVSWNVM 269
Query: 283 ISGFAMHGMGKEAVENFGRMQKVG-LKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEEC 341
ISG+ ++A+ F MQ+ G KP+ T +S L+AC+ +E G + + +E
Sbjct: 270 ISGYVRCRRFEDAINTFREMQQEGNEKPDEATVVSTLSACTALKNLELGDEIHNYVRKEL 329
Query: 342 EVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEIT--DVVVWRTLLGA 389
I + L+DM + G L A I E++ +V+ W +++
Sbjct: 330 GFTTRIDN--ALLDMYAKCGCL----NIARNIFDEMSMKNVICWTSMISG 373
>gi|15241180|ref|NP_200442.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171630|sp|Q9FMA1.1|PP433_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g56310
gi|10177829|dbj|BAB11258.1| unnamed protein product [Arabidopsis thaliana]
gi|332009364|gb|AED96747.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 530
Score = 299 bits (765), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 161/441 (36%), Positives = 261/441 (59%), Gaps = 17/441 (3%)
Query: 16 QIHSHLLTTNSLLHHSQLFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSF 75
+ +H N+ LH NT++ SL + P + ++++ P D+F
Sbjct: 68 SVFTHQPCPNTYLH-----NTMIRALSLLDEPNAHSIAITVYRKLWALCAKP-----DTF 117
Query: 76 TYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEM 135
T+ F+++ +S G Q+H + GF S V+V T L+ MY S G L D+ K+FDEM
Sbjct: 118 TFPFVLKIAVRVSDVWFGRQIHGQVVVFGFDSSVHVVTGLIQMYFSCGGLGDARKMFDEM 177
Query: 136 PERNLVTWNVMITGLVKWGELEFARSLFEEMPC--RNVVSWTGIIDGYTRMNRSNEALAL 193
+++ WN ++ G K GE++ ARSL E MPC RN VSWT +I GY + R++EA+ +
Sbjct: 178 LVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEV 237
Query: 194 FRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTY 253
F++M+ E EP E+T+LAVL A G ++ + I Y + RG + + N +ID Y
Sbjct: 238 FQRMLM-ENVEPDEVTLLAVLSACADLGSLELGERICSYVDHRGMNR-AVSLNNAVIDMY 295
Query: 254 AKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVT 313
AK G I A +FE V +N+V+WT+II+G A HG G EA+ F RM K G++PN VT
Sbjct: 296 AKSGNITKALDVFE--CVNERNVVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVT 353
Query: 314 FLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGI 373
F+++L+ACSH G V+ G F+ M + + P+I+HYGC+ID+LGRAG+L +A++ +
Sbjct: 354 FIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMIDLLGRAGKLREADEVIKSM 413
Query: 374 PSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDA 433
P + + +W +LL A + H ++E+GER +++++E G+Y+L+ N+ + +GR+ ++
Sbjct: 414 PFK-ANAAIWGSLLAASNVHHDLELGERALSELIKLEPNNSGNYMLLANLYSNLGRWDES 472
Query: 434 ERLRRVMDERNAFKVPGCSLV 454
+R +M K+ G S +
Sbjct: 473 RMMRNMMKGIGVKKMAGESSI 493
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 121/276 (43%), Gaps = 39/276 (14%)
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNE---ALALFRKMVACEYTEPSEITI 210
G L +A S+F PC N +I + ++ N A+ ++RK+ A +P T
Sbjct: 61 GHLRYAYSVFTHQPCPNTYLHNTMIRALSLLDEPNAHSIAITVYRKLWAL-CAKPDTFTF 119
Query: 211 LAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDIS 270
VL + DV + IHG GF + + V+ LI Y CG + A K+F+++
Sbjct: 120 PFVLKIAVRVSDVWFGRQIHGQVVVFGFDS-SVHVVTGLIQMYFSCGGLGDARKMFDEML 178
Query: 271 VER-------------------------------KNLVSWTSIISGFAMHGMGKEAVENF 299
V+ +N VSWT +ISG+A G EA+E F
Sbjct: 179 VKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVF 238
Query: 300 GRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGR 359
RM ++P+ VT L+VL+AC+ G +E G V+ + + +IDM +
Sbjct: 239 QRMLMENVEPDEVTLLAVLSACADLGSLELGERIC-SYVDHRGMNRAVSLNNAVIDMYAK 297
Query: 360 AGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGN 395
+G + +A + +VV W T++ + HG+
Sbjct: 298 SGNITKALDVFECVNER--NVVTWTTIIAGLATHGH 331
>gi|225466163|ref|XP_002263755.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 624
Score = 299 bits (765), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 157/422 (37%), Positives = 249/422 (59%), Gaps = 13/422 (3%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNL 92
++NT+ Y + + +Y ++ H + P + FTY LIR C
Sbjct: 87 IYNTIFRGYLRWQLARNCIFMYSRML------HKSVSP--NKFTYPPLIRACCIDYAIEE 138
Query: 93 GTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVK 152
G Q+HA + K GF + + L++MYV+ L+ + ++FD MP+R++V+W +ITG +
Sbjct: 139 GKQIHAHVLKFGFGADGFSLNNLIHMYVNFQSLEQARRVFDNMPQRDVVSWTSLITGYSQ 198
Query: 153 WGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILA 212
WG ++ AR +FE MP RN VSW +I Y + NR +EA ALF +M E + +
Sbjct: 199 WGFVDKAREVFELMPERNSVSWNAMIAAYVQSNRLHEAFALFDRM-RLENVVLDKFVAAS 257
Query: 213 VLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVE 272
+L A G ++ + IHGY EK G D ++ +ID Y KCGC+ AS++F ++
Sbjct: 258 MLSACTGLGALEQGKWIHGYIEKSGIE-LDSKLATTVIDMYCKCGCLEKASEVFNELP-- 314
Query: 273 RKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLN 332
+K + SW +I G AMHG G+ A+E F M++ + P+ +TF++VL+AC+H GLVEEG +
Sbjct: 315 QKGISSWNCMIGGLAMHGKGEAAIELFKEMEREMVAPDGITFVNVLSACAHSGLVEEGKH 374
Query: 333 FFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSF 392
+F M E + P ++H+GC++D+LGRAG LE+A K +P D V L+GAC
Sbjct: 375 YFQYMTEVLGLKPGMEHFGCMVDLLGRAGLLEEARKLINEMPVN-PDAGVLGALVGACRI 433
Query: 393 HGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCS 452
HGN E+GE++ +K++E+E G YVL+ N+ A GR+ D ++R++M++R K PG S
Sbjct: 434 HGNTELGEQIGKKVIELEPHNSGRYVLLANLYASAGRWEDVAKVRKLMNDRGVKKAPGFS 493
Query: 453 LV 454
++
Sbjct: 494 MI 495
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/322 (22%), Positives = 141/322 (43%), Gaps = 42/322 (13%)
Query: 145 VMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTE 204
+ + K G+L +A +F+++P + + I GY R + + ++ +M+ +
Sbjct: 59 IKFCAISKSGDLNYALEVFDKIPHPDAYIYNTIFRGYLRWQLARNCIFMYSRMLH-KSVS 117
Query: 205 PSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASK 264
P++ T ++ A + ++ + IH + K GF A D LN LI Y + A +
Sbjct: 118 PNKFTYPPLIRACCIDYAIEEGKQIHAHVLKFGFGA-DGFSLNNLIHMYVNFQSLEQARR 176
Query: 265 LFEDISVERKNLVSWTSIISGFAMHGMGKEAVEN-------------------------- 298
+F+++ ++++VSWTS+I+G++ G +A E
Sbjct: 177 VFDNMP--QRDVVSWTSLITGYSQWGFVDKAREVFELMPERNSVSWNAMIAAYVQSNRLH 234
Query: 299 -----FGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCL 353
F RM+ + ++ S+L+AC+ G +E+G + +E+ + D K +
Sbjct: 235 EAFALFDRMRLENVVLDKFVAASMLSACTGLGALEQG-KWIHGYIEKSGIELDSKLATTV 293
Query: 354 IDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGY 413
IDM + G LE+A + +P + + W ++G + HG GE EMER
Sbjct: 294 IDMYCKCGCLEKASEVFNELPQK--GISSWNCMIGGLAMHGK---GEAAIELFKEMEREM 348
Query: 414 -GGDYVLMYNILAGVGRFGDAE 434
D + N+L+ G E
Sbjct: 349 VAPDGITFVNVLSACAHSGLVE 370
>gi|312190418|gb|ADQ43217.1| pentatricopeptide repeat [Eutrema parvulum]
Length = 616
Score = 298 bits (764), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 159/423 (37%), Positives = 249/423 (58%), Gaps = 14/423 (3%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNL 92
L+N ++ S ++ P ++ LLY H +++T+ FL++ C+ LS
Sbjct: 77 LWNLMIRGLSCSDQPDRSLLLY--------HRMLCCSAPHNAYTFPFLLKACSNLSAFQE 128
Query: 93 GTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVK 152
TQ+HA I+K G+ +Y +L+N Y G K + LFD + E + V+WN +I G VK
Sbjct: 129 TTQIHAHITKFGYGHDIYAVNSLINSYAVTGNFKHAHLLFDRIQEPDAVSWNSVIKGYVK 188
Query: 153 WGELEFARSLFEEMPCRN-VVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITIL 211
GE++ A +LF +MP +N +SWT +I GY + + EAL LF +M P +++
Sbjct: 189 AGEMDMALTLFRKMPEKNNAISWTTMISGYVQAGMNKEALQLFHEMQNSN-VPPDNVSLA 247
Query: 212 AVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISV 271
+ L A Q G ++ + IH Y K T D + LID YAKCG + A +F+++
Sbjct: 248 SALSACSQLGALEQGKWIHSYANKTR-TRIDSVLCCVLIDMYAKCGEMEEALGVFKNMKT 306
Query: 272 ERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGL 331
K++ WT++ISG+A HG+G+EA+ F MQ +G+KPN +TF +VL ACS+ GLVEEG
Sbjct: 307 --KSVQVWTALISGYAYHGLGREAISKFLEMQNMGVKPNAITFTAVLTACSYTGLVEEGK 364
Query: 332 NFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACS 391
+ F+ + + + P I+HYGC++D+LGRAG L +A + +P + + V+W +LL AC
Sbjct: 365 SVFNTIERDYNLKPTIEHYGCMVDLLGRAGLLNEANRFIQKMPLK-PNAVIWGSLLKACQ 423
Query: 392 FHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGC 451
H N+E+GE++ ++EM+ +GG YV M NI A ++ A RR+M E+ KVPGC
Sbjct: 424 IHKNIELGEKIGEILIEMDSNHGGRYVHMANIHAMGKKWDKAAETRRLMREQGVVKVPGC 483
Query: 452 SLV 454
S +
Sbjct: 484 SAI 486
>gi|225443714|ref|XP_002265079.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g18840-like [Vitis vinifera]
Length = 536
Score = 298 bits (763), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 163/456 (35%), Positives = 252/456 (55%), Gaps = 44/456 (9%)
Query: 30 HSQLFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSH 89
+S ++NT++ Y+ + +P+ A ++ Q+ H+ + P D +T++F +++C + S
Sbjct: 72 NSYMWNTIIRAYANSPTPEAALTIFHQML------HASVLP--DKYTFTFALKSCGSFSG 123
Query: 90 PNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKL------------------ 131
G Q+H + K G +++ L+++Y S G ++D+ L
Sbjct: 124 VEEGRQIHGHVLKTGLGDDLFIQNTLIHLYASCGCIEDARHLLDRMLERDVVSWNALLSA 183
Query: 132 -------------FDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGII 178
FDEM ERN+ +WN MI+G V G LE AR +F E P +NVVSW +I
Sbjct: 184 YAERGLMELACHLFDEMTERNVESWNFMISGYVGVGLLEEARRVFGETPVKNVVSWNAMI 243
Query: 179 DGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGF 238
GY+ R +E L LF M +P T+++VL A G + + +H Y +K G
Sbjct: 244 TGYSHAGRFSEVLVLFEDMQHAG-VKPDNCTLVSVLSACAHVGALSQGEWVHAYIDKNGI 302
Query: 239 TAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVEN 298
+ D V L+D Y+KCG I A ++F S RK++ +W SIISG + HG G+ A++
Sbjct: 303 S-IDGFVATALVDMYSKCGSIEKALEVFN--SCLRKDISTWNSIISGLSTHGSGQHALQI 359
Query: 299 FGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLG 358
F M G KPN VTF+ VL+ACS GL++EG F+ MV + P I+HYGC++D+LG
Sbjct: 360 FSEMLVEGFKPNEVTFVCVLSACSRAGLLDEGREMFNLMVHVHGIQPTIEHYGCMVDLLG 419
Query: 359 RAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYV 418
R G LE+AE+ +P + VVW +LLGAC HGNVE+ ERV +K+LE+ +V
Sbjct: 420 RVGLLEEAEELVQKMPQKEAS-VVWESLLGACRNHGNVELAERVAQKLLELSPQESSSFV 478
Query: 419 LMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
+ N+ A +GR+ D +R+ M + K PGCS++
Sbjct: 479 QLSNMYASMGRWKDVMEVRQKMRAQGVRKDPGCSMI 514
>gi|225425668|ref|XP_002269694.1| PREDICTED: pentatricopeptide repeat-containing protein At2g02980
[Vitis vinifera]
gi|296086362|emb|CBI31951.3| unnamed protein product [Vitis vinifera]
Length = 595
Score = 298 bits (763), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 168/448 (37%), Positives = 261/448 (58%), Gaps = 45/448 (10%)
Query: 7 SQTPNNITTQIHSHLLTTNSLLHHSQLFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHS 66
S P + Q H+H L LFNT+ Y+ ++P +AF L+ Q+ S
Sbjct: 63 SLNPTTTSMQ-HAHHLFDQIPQPDIVLFNTMARGYARTDTPLRAFTLFTQIL------FS 115
Query: 67 PLPPLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLK 126
L P D +T+ L++ CA+ G QLH + K+G +VYV L+NMY + +
Sbjct: 116 GLFP--DDYTFPSLLKACASCKALEEGRQLHCLAIKLGLSENVYVCPTLINMYTACNEMD 173
Query: 127 DSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNR 186
+ ++FD++ E PC VV++ +I GY R +R
Sbjct: 174 CARRVFDKIWE-----------------------------PC--VVTYNAMITGYARGSR 202
Query: 187 SNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVL 246
NEAL+LFR++ A +P+++T+L+VL + G + + +H Y +K GF F ++V
Sbjct: 203 PNEALSLFRELQA-RNLKPTDVTMLSVLSSCALLGALDLGKWMHEYVKKNGFNRF-VKVD 260
Query: 247 NCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVG 306
LID YAKCG + A +FE+++V ++ +W+++I +A+HG G +AV F M+K G
Sbjct: 261 TALIDMYAKCGSLDDAVCVFENMAV--RDTQAWSAMIMAYAIHGHGLKAVSLFKEMRKAG 318
Query: 307 LKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQA 366
+P+ +TFL +L ACSH GLVEEG +F M ++ V+P IKHYGC++D+LGRAGRLE+A
Sbjct: 319 TEPDEITFLGLLYACSHTGLVEEGFEYFYGMRDKYGVIPGIKHYGCMVDLLGRAGRLEEA 378
Query: 367 EKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAG 426
+ +G+P T ++WRTLL AC HGNVE+G+RV +I E++ +GGDY+++ N+ A
Sbjct: 379 YEFIVGLPIRPTP-ILWRTLLSACGSHGNVELGKRVIEQIFELDDSHGGDYIILSNLCAR 437
Query: 427 VGRFGDAERLRRVMDERNAFKVPGCSLV 454
GR+ D +R++M+ER K+PGCS V
Sbjct: 438 AGRWEDVNYVRKLMNERGVVKIPGCSSV 465
>gi|147790932|emb|CAN77232.1| hypothetical protein VITISV_001089 [Vitis vinifera]
Length = 575
Score = 298 bits (762), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 159/422 (37%), Positives = 251/422 (59%), Gaps = 17/422 (4%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNL 92
+ ++H ++L ++A Y Q+ T P ++FT+S +++ C
Sbjct: 42 FWTAIIHGHALRGLHEQALNFYAQM---LTQGVEP-----NAFTFSSILKLCPI----EP 89
Query: 93 GTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVK 152
G LH+ K+GF S +YV T L+++Y G + + +LFD MPE++LV+ M+T K
Sbjct: 90 GKALHSQAVKLGFDSDLYVRTGLLDVYARGGDVVSAQQLFDTMPEKSLVSLTAMLTCYAK 149
Query: 153 WGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILA 212
GEL+ AR LF+ M R+ V W +IDGYT+ NEAL LFR+M+ + +P+E+T+L+
Sbjct: 150 HGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRMLKAK-AKPNEVTVLS 208
Query: 213 VLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVE 272
VL A Q G ++S + +H Y E G F++ V L+D Y+KCG + A +F+ I +
Sbjct: 209 VLSACGQLGALESGRWVHSYIENNGIQ-FNVHVGTALVDMYSKCGSLEDARLVFDKI--D 265
Query: 273 RKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLN 332
K++V+W S+I G+AM G +EA++ F M ++GL P +TF+ +L+AC H G V EG +
Sbjct: 266 DKDVVAWNSMIVGYAMXGFSQEALQLFKSMCRMGLHPTNITFIGILSACGHSGWVTEGWD 325
Query: 333 FFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSF 392
F+KM +E + P I+HYGC++++LGRAG +EQA + + E D V+W TLLGAC
Sbjct: 326 IFNKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQAYELVKNMNIE-PDPVLWGTLLGACRL 384
Query: 393 HGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCS 452
HG + +GE++ +++ G Y+L+ NI A VG + RLR +M + K PGCS
Sbjct: 385 HGKIALGEKIVELLVDQNLANSGTYILLSNIYAAVGNWDGVARLRTMMKDSGVKKEPGCS 444
Query: 453 LV 454
+
Sbjct: 445 SI 446
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 123/305 (40%), Gaps = 69/305 (22%)
Query: 119 YVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGII 178
Y SLG L+++ +LF +V WT II
Sbjct: 19 YASLG-------------------------------RLDYSVALFGRTQNPSVFFWTAII 47
Query: 179 DGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGF 238
G+ +AL + +M+ + EP+ T ++L ++ + +H K GF
Sbjct: 48 HGHALRGLHEQALNFYAQMLT-QGVEPNAFTFSSILKLC----PIEPGKALHSQAVKLGF 102
Query: 239 TAFDIRVLNCLIDTYAKCGCIFSASKLFEDI----------------------------- 269
+ D+ V L+D YA+ G + SA +LF+ +
Sbjct: 103 DS-DLYVRTGLLDVYARGGDVVSAQQLFDTMPEKSLVSLTAMLTCYAKHGELDAARVLFD 161
Query: 270 SVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEE 329
+E ++ V W +I G+ +GM EA+ F RM K KPN VT LSVL+AC G +E
Sbjct: 162 GMEERDGVCWNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGALES 221
Query: 330 GLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGA 389
G + +E + ++ L+DM + G LE A I + DVV W +++
Sbjct: 222 G-RWVHSYIENNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKIDDK--DVVAWNSMIVG 278
Query: 390 CSFHG 394
+ G
Sbjct: 279 YAMXG 283
>gi|359479914|ref|XP_002268148.2| PREDICTED: uncharacterized protein LOC100250295 [Vitis vinifera]
Length = 1130
Score = 296 bits (759), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 165/449 (36%), Positives = 261/449 (58%), Gaps = 13/449 (2%)
Query: 10 PNNITTQIHSHLLTTNSLLHHSQLFNTLL--HFYSLAESPQKAFLLYKQLQQIYTHSHSP 67
P + + H L ++ L S L+NTL+ H + A+ ++ H P
Sbjct: 4 PTRLISSTHPTLHFSHPTLE-SFLWNTLIRAHVQARAQPTGPTHSPISIFVRMRFHGVQP 62
Query: 68 LPPLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKD 127
D T+ FL+++ A+ S +LG +HA I + G +V T+L++MY S G L
Sbjct: 63 -----DFHTFPFLLQSFASPSLLHLGRSVHAQILRFGLAIDPFVQTSLISMYSSCGNLGF 117
Query: 128 SSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRS 187
+ ++FDE+P+ +L +WN +I + G ++ AR+LF MP RNV+SW+ +I+GY R +
Sbjct: 118 ARQVFDEIPQPDLPSWNSIINANFQAGLVDMARNLFAVMPERNVISWSCMINGYVRCGQY 177
Query: 188 NEALALFR--KMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRV 245
EALALFR +M+ P+E T+ VL A + G ++ + H Y +K G D+ +
Sbjct: 178 KEALALFREMQMLGVNDVRPNEFTMSGVLAACGRLGALEHGKWAHAYIDKCGMPV-DVVL 236
Query: 246 LNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKV 305
LID YAKCG + A+ +F ++ K++++W+++ISG AMHG+ +E V F +M
Sbjct: 237 GTALIDMYAKCGSVEKATWVFSNLG-PNKDVMAWSAMISGLAMHGLAEECVGLFSKMINQ 295
Query: 306 GLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQ 365
G++PN VTFL+V AC HGGLV EG ++ +M E+ ++P I+HYGC++D+ GRAGR+++
Sbjct: 296 GVRPNAVTFLAVFCACVHGGLVSEGKDYLRRMTEDYSIIPTIQHYGCMVDLYGRAGRIKE 355
Query: 366 AEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILA 425
A +P E DV+VW LL HG++E E +K++E+E G YVL+ N+ A
Sbjct: 356 AWNVVKSMPME-PDVLVWGALLSGSRMHGDIETCELALKKLIELEPTNSGAYVLLSNVYA 414
Query: 426 GVGRFGDAERLRRVMDERNAFKVPGCSLV 454
GR+ D +R +M+ KVPGCSL+
Sbjct: 415 KRGRWEDVRHVRDLMETMGIKKVPGCSLI 443
>gi|297797743|ref|XP_002866756.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312591|gb|EFH43015.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 649
Score = 296 bits (758), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 160/426 (37%), Positives = 258/426 (60%), Gaps = 21/426 (4%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNL 92
L+N ++ +S ++ P+++ LLY+++ +P +++T+ L++ C+ LS
Sbjct: 111 LWNLMIRGFSCSDEPERSLLLYQRM----LCCSAP----HNAYTFPSLLKACSNLSALEE 162
Query: 93 GTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVK 152
TQ+HA I+K+G+++ VY +L+N Y + G K + LFD +P+ + V+WN +I G K
Sbjct: 163 TTQIHAQITKLGYENDVYAVNSLINSYAATGNFKLAHLLFDRIPKPDAVSWNSVIKGYAK 222
Query: 153 WGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILA 212
G+++ A +LF +M +N +SWT +I GY + EAL LF +M + EP +++
Sbjct: 223 AGKMDIALTLFRKMVEKNAISWTTMISGYVQAGMHKEALQLFHEMQNSD-VEPDNVSLAN 281
Query: 213 VLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIR---VLNC-LIDTYAKCGCIFSASKLFED 268
L A Q G ++ + IH Y T IR VL C LID YAKCG + A ++F++
Sbjct: 282 ALSACAQLGALEQGKWIHSY-----LTKTRIRMDSVLGCVLIDMYAKCGDMGEALEVFKN 336
Query: 269 ISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVE 328
I +RK++ +WT++ISG+A HG G+EA+ F MQK+G+KPN +TF +VL ACS+ GLVE
Sbjct: 337 I--QRKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTTVLTACSYTGLVE 394
Query: 329 EGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLG 388
EG F M + + P I+HYGC++D+L RAG L++A++ +P + + V+W LL
Sbjct: 395 EGKLIFYNMERDYNLKPTIEHYGCVVDLLSRAGLLDEAKRFIQEMPLK-PNAVIWGALLK 453
Query: 389 ACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKV 448
AC H N+E+GE + ++ ++ +GG YV NI A ++ A RR+M E+ KV
Sbjct: 454 ACRIHKNIELGEEIGEILIAIDPYHGGRYVHKANIHAMGKKWDKAAETRRLMKEQGVAKV 513
Query: 449 PGCSLV 454
PGCS +
Sbjct: 514 PGCSTI 519
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 89/350 (25%), Positives = 155/350 (44%), Gaps = 23/350 (6%)
Query: 70 PLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSL---GFLK 126
PL Y + T S Q+HA + K G Y T ++ +S FL
Sbjct: 36 PLLSGSCYCMMPNTETRCSKQEELKQIHARMLKTGLIQDSYAITKFLSCCISSTSSDFLP 95
Query: 127 DSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPC----RNVVSWTGIIDGYT 182
+ +FD + WN+MI G E E + L++ M C N ++ ++ +
Sbjct: 96 YAQIVFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCCSAPHNAYTFPSLLKACS 155
Query: 183 RMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFD 242
++ E + ++ Y E + +++ + G+ K L+ K ++
Sbjct: 156 NLSALEETTQIHAQITKLGY-ENDVYAVNSLINSYAATGNFKLAHLLFDRIPKPDAVSW- 213
Query: 243 IRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRM 302
N +I YAK G + A LF + VE KN +SWT++ISG+ GM KEA++ F M
Sbjct: 214 ----NSVIKGYAKAGKMDIALTLFRKM-VE-KNAISWTTMISGYVQAGMHKEALQLFHEM 267
Query: 303 QKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGC-LIDMLGRAG 361
Q ++P+ V+ + L+AC+ G +E+G + + + + D GC LIDM + G
Sbjct: 268 QNSDVEPDNVSLANALSACAQLGALEQG-KWIHSYLTKTRIRMD-SVLGCVLIDMYAKCG 325
Query: 362 RLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMER 411
+ +A + I + V W L+ ++HG+ G K +EM++
Sbjct: 326 DMGEALEVFKNIQRK--SVQAWTALISGYAYHGH---GREAISKFMEMQK 370
>gi|296089800|emb|CBI39619.3| unnamed protein product [Vitis vinifera]
Length = 640
Score = 296 bits (757), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 163/429 (37%), Positives = 255/429 (59%), Gaps = 20/429 (4%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNL 92
++NT++ Y + S +KA LLYK + + + + P D++TY +++ CA
Sbjct: 96 MWNTMMRAYIQSNSAEKALLLYKLMVK------NNVGP--DNYTYPLVVQACAVRLLEFG 147
Query: 93 GTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVK 152
G ++H + KVGF S VYV L+NMY G ++D+ KLFDE P + V+WN ++ G VK
Sbjct: 148 GKEIHDHVLKVGFDSDVYVQNTLINMYAVCGNMRDARKLFDESPVLDSVSWNSILAGYVK 207
Query: 153 WGELEF---ARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEIT 209
G++ A LF EM +++VSW+ +I GY + EAL +F +M A E+
Sbjct: 208 KGDMGQVMEAWKLFNEMDEKDMVSWSALISGYEQNGMYEEALVMFIEMNA-NGMRLDEVV 266
Query: 210 ILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLI----DTYAKCGCIFSASKL 265
+++VL A VK+ ++IHG + G ++ + + N LI D Y KCGC+ +A ++
Sbjct: 267 VVSVLSACAHLSIVKTGKMIHGLVIRMGIESY-VNLQNALIHMYSDMYMKCGCVENALEV 325
Query: 266 FEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGG 325
F +E K + SW ++I G A++G+ + +++ F M+ G+ PN +TF+ VL AC H G
Sbjct: 326 FN--GMEEKGVSSWNALIIGLAVNGLVERSLDMFSEMKNNGVIPNEITFMGVLGACRHMG 383
Query: 326 LVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRT 385
LV+EG F M+E+ + P++KHYGC++D+LGRAG L +AEK +P DV W
Sbjct: 384 LVDEGRCHFASMIEKHGIEPNVKHYGCMVDLLGRAGLLNEAEKLIESMPMA-PDVATWGA 442
Query: 386 LLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNA 445
LLGAC HG+ EMGERV RK++E++ + G +VL+ NI A G + D +R +M ++
Sbjct: 443 LLGACKKHGDTEMGERVGRKLIELQPDHDGFHVLLSNIFASKGDWEDVLEVRGMMKQQGV 502
Query: 446 FKVPGCSLV 454
K PGCSL+
Sbjct: 503 VKTPGCSLI 511
>gi|225427576|ref|XP_002268530.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Vitis vinifera]
Length = 631
Score = 295 bits (756), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 165/436 (37%), Positives = 262/436 (60%), Gaps = 27/436 (6%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+NTL+ S + P A L++ ++ + S P + FT+ + + C G
Sbjct: 79 YNTLIRALSESNDPCDALLVF--IEMVEDCSVEP-----NCFTFPSVFKACGRAERLREG 131
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLF---------DEMPER------ 138
Q+H + K G S +V + +V MY+S G ++D+ +LF D + ++
Sbjct: 132 RQVHGLAVKFGLDSDEFVVSNVVRMYLSCGVMEDAHRLFYRRVFVDGCDGIRDKKRRVDG 191
Query: 139 NLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMV 198
++V WNVMI G V+ GELE AR+LF+EMP R+VVSW +I GY + EA+ +FR+M
Sbjct: 192 DVVLWNVMIDGYVRIGELEVARNLFDEMPQRSVVSWNVMIAGYAQSGHFKEAVEVFREMQ 251
Query: 199 ACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGC 258
E P+ +T+++VLPA+ + G ++ + +H Y + D+ + + LID YAKCG
Sbjct: 252 MAE-VPPNYVTLVSVLPAMSRLGALELGKWVHLYAVRNNIGVDDV-LGSALIDMYAKCGS 309
Query: 259 IFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVL 318
I A ++FE + ++N+V+W++II+G AMHG K+ +++F M++ G+ P+ VT++ +L
Sbjct: 310 IEKALQVFE--GLPKRNVVTWSTIIAGLAMHGRAKDTLDHFEDMERAGVMPSDVTYIGLL 367
Query: 319 NACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEIT 378
+ACSH GLV EG FFD MV + P I+HYGC++D+LGRAG LE++E+ L +P +
Sbjct: 368 SACSHAGLVNEGRWFFDHMVRVSGLEPRIEHYGCMVDLLGRAGLLEESEELILNMPIKPD 427
Query: 379 DVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRR 438
D V+W+ LLGAC HGNVEMG+RV ++E+ G YV + NI A +G + ++R
Sbjct: 428 D-VIWKALLGACKMHGNVEMGKRVAEHLMELAPHDSGSYVALSNIYASLGNWEGVAKVRL 486
Query: 439 VMDERNAFKVPGCSLV 454
+M E + K PGCS +
Sbjct: 487 MMKEMDVRKDPGCSWI 502
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 124/288 (43%), Gaps = 50/288 (17%)
Query: 155 ELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVL 214
+L++AR +F M N S+ +I + N +AL +F +MV EP+ T +V
Sbjct: 60 DLDYARKIFRSMHRPNCFSYNTLIRALSESNDPCDALLVFIEMVEDCSVEPNCFTFPSVF 119
Query: 215 PAIWQNGDVKSCQLIHGYGEKRGFTAF--------------------------------- 241
A + ++ + +HG K G +
Sbjct: 120 KACGRAERLREGRQVHGLAVKFGLDSDEFVVSNVVRMYLSCGVMEDAHRLFYRRVFVDGC 179
Query: 242 ------------DIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMH 289
D+ + N +ID Y + G + A LF+++ ++++VSW +I+G+A
Sbjct: 180 DGIRDKKRRVDGDVVLWNVMIDGYVRIGELEVARNLFDEMP--QRSVVSWNVMIAGYAQS 237
Query: 290 GMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKH 349
G KEAVE F MQ + PN VT +SVL A S G +E G V + D+
Sbjct: 238 GHFKEAVEVFREMQMAEVPPNYVTLVSVLPAMSRLGALELGKWVHLYAVRNNIGVDDVLG 297
Query: 350 YGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVE 397
LIDM + G +E+A + G+P +VV W T++ + HG +
Sbjct: 298 -SALIDMYAKCGSIEKALQVFEGLPKR--NVVTWSTIIAGLAMHGRAK 342
>gi|356495396|ref|XP_003516564.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Glycine max]
Length = 516
Score = 295 bits (756), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 152/421 (36%), Positives = 247/421 (58%), Gaps = 15/421 (3%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNL 92
++NT+L YS + P+ A LLY Q+ H+ +P +S+T+ FL++ C+ LS
Sbjct: 77 IWNTMLRAYSNSNDPEAALLLYHQML------HNSVP--HNSYTFPFLLKACSALSAFEE 128
Query: 93 GTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVK 152
Q+HA I K GF VY +L+ +Y G ++ + LF+++P R++V+WN+MI G +K
Sbjct: 129 TQQIHAHIIKRGFGLEVYATNSLLRVYAISGNIQSAHVLFNQLPTRDIVSWNIMIDGYIK 188
Query: 153 WGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILA 212
+G L+ A +F+ MP +NV+SWT +I G+ R+ EAL+L ++M+ +P IT+
Sbjct: 189 FGNLDMAYKIFQAMPEKNVISWTTMIVGFVRIGMHKEALSLLQQMLVAG-IKPDSITLSC 247
Query: 213 VLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNC-LIDTYAKCGCIFSASKLFEDISV 271
L A G ++ + IH Y EK VL C L D Y KCG + A +F +
Sbjct: 248 SLSACAGLGALEQGKWIHTYIEKNEIKIDP--VLGCVLTDMYVKCGEMEKALLVFSKL-- 303
Query: 272 ERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGL 331
E+K + +WT+II G A+HG G+EA++ F +MQK G+ PN +TF ++L ACSH GL EEG
Sbjct: 304 EKKCVCAWTAIIGGLAIHGKGREALDWFTQMQKAGINPNSITFTAILTACSHAGLTEEGK 363
Query: 332 NFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACS 391
+ F+ M + P ++HYGC++D++GRAG L++A + +P + + +W LL AC
Sbjct: 364 SLFESMSSVYNIKPSMEHYGCMVDLMGRAGLLKEAREFIESMPVK-PNAAIWGALLNACQ 422
Query: 392 FHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGC 451
H + E+G+ + + ++E++ + G Y+ + +I A G + R+R + R PGC
Sbjct: 423 LHKHFELGKEIGKILIELDPDHSGRYIHLASIYAAAGEWNQVVRVRSQIKHRGLLNHPGC 482
Query: 452 S 452
S
Sbjct: 483 S 483
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 91/346 (26%), Positives = 160/346 (46%), Gaps = 48/346 (13%)
Query: 68 LPPLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVG-FQSHVYVNTALVN-MYVSLGFL 125
LPP ++ L+ C+ + Q+H + K G ++ + V+T LV+ + L L
Sbjct: 6 LPP--NTEQTQALLERCSNMKEL---MQIHGQLLKKGTIRNQLTVSTLLVSYARIELVNL 60
Query: 126 KDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVV--SWTGIIDGYTR 183
+ +FD + N V WN M+ + E A L+ +M +V S+T +
Sbjct: 61 AYTRVVFDSISSPNTVIWNTMLRAYSNSNDPEAALLLYHQMLHNSVPHNSYT-----FPF 115
Query: 184 MNRSNEALALFRKMVACE------------YTEPSEITILAVLPAIWQNGDVKSCQLIHG 231
+ ++ AL+ F + Y S + + A+ +G+++S ++
Sbjct: 116 LLKACSALSAFEETQQIHAHIIKRGFGLEVYATNSLLRVYAI------SGNIQSAHVLFN 169
Query: 232 YGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGM 291
R DI N +ID Y K G + A K+F+ ++ KN++SWT++I GF GM
Sbjct: 170 QLPTR-----DIVSWNIMIDGYIKFGNLDMAYKIFQ--AMPEKNVISWTTMIVGFVRIGM 222
Query: 292 GKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYG 351
KEA+ +M G+KP+ +T L+AC+ G +E+G + +E+ E+ D G
Sbjct: 223 HKEALSLLQQMLVAGIKPDSITLSCSLSACAGLGALEQG-KWIHTYIEKNEIKID-PVLG 280
Query: 352 C-LIDMLGRAGRLEQAEKTALGIPSEITD--VVVWRTLLGACSFHG 394
C L DM + G +E+ AL + S++ V W ++G + HG
Sbjct: 281 CVLTDMYVKCGEMEK----ALLVFSKLEKKCVCAWTAIIGGLAIHG 322
>gi|359493517|ref|XP_002264078.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g33350-like [Vitis vinifera]
Length = 573
Score = 295 bits (756), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 157/431 (36%), Positives = 252/431 (58%), Gaps = 20/431 (4%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNL 92
L+ ++ Y+ A LLY+ + P P + F Y ++++C + P
Sbjct: 121 LYTAMITAYASHSDHTSALLLYRNM----VRRRRPWP---NHFIYPHVLKSCTQVVGPGS 173
Query: 93 GTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKL-FDEMPERNLVTWNVMITGLV 151
+H + + GF+ + V TAL++ Y+ +S++L FDEM ERN+V+W MI+G
Sbjct: 174 ARMVHCQVLRSGFEQYPVVQTALLDAYLRFWSDVESARLLFDEMTERNVVSWTAMISGYT 233
Query: 152 KWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEY------TEP 205
+ G++ A LFEEMP R+V SW +I GYT+ EAL+LFR+M+A E P
Sbjct: 234 RLGQIGNAVLLFEEMPERDVPSWNALIAGYTQNGLFMEALSLFRRMIAVEAGAWGQGNRP 293
Query: 206 SEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKL 265
+++T + L A G ++ + IHGY + G D V N L+D Y KCGC+ A ++
Sbjct: 294 NQVTAVCSLSACGHTGMLRLGKWIHGYVYRNGL-GLDSFVSNALVDMYGKCGCLKEARRV 352
Query: 266 FEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVG--LKPNRVTFLSVLNACSH 323
F D ++ER +L SW S+I+ A+HG + A+ F M G +KP+ VTF+ +LNAC+H
Sbjct: 353 F-DRTLER-SLTSWNSMINCLALHGQSQNAISVFEEMMTCGSGVKPDEVTFIGLLNACTH 410
Query: 324 GGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVW 383
GGLVE+G +F+ M + + P I+HYGCL+D+LGRAG+ E+A + G+ E D V+W
Sbjct: 411 GGLVEKGWLYFELMTQNYGIEPQIEHYGCLVDLLGRAGQFEEAMEVVRGMRIE-PDEVIW 469
Query: 384 RTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDER 443
+LL C HG+ ++ E +K+++M+ GG +++ NI +G++ + ++R+V+ E+
Sbjct: 470 GSLLNGCKIHGHTDLAEFSIKKLIDMDPNNGGYGIMLANIYGELGKWDEVRKVRKVLKEQ 529
Query: 444 NAFKVPGCSLV 454
NA K PGCS +
Sbjct: 530 NAHKTPGCSWI 540
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 132/319 (41%), Gaps = 45/319 (14%)
Query: 156 LEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLP 215
L +AR +F+ + NV +T +I Y + AL L+R MV P+ VL
Sbjct: 104 LSYARFIFDHVESPNVYLYTAMITAYASHSDHTSALLLYRNMVRRRRPWPNHFIYPHVLK 163
Query: 216 AIWQNGDVKSCQLIHGYGEKRGFTAFDI-------------------RVL---------- 246
+ Q S +++H + GF + + R+L
Sbjct: 164 SCTQVVGPGSARMVHCQVLRSGFEQYPVVQTALLDAYLRFWSDVESARLLFDEMTERNVV 223
Query: 247 --NCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQK 304
+I Y + G I +A LFE++ +++ SW ++I+G+ +G+ EA+ F RM
Sbjct: 224 SWTAMISGYTRLGQIGNAVLLFEEMP--ERDVPSWNALIAGYTQNGLFMEALSLFRRMIA 281
Query: 305 V-------GLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDML 357
V G +PN+VT + L+AC H G++ G + V + D L+DM
Sbjct: 282 VEAGAWGQGNRPNQVTAVCSLSACGHTGMLRLG-KWIHGYVYRNGLGLDSFVSNALVDMY 340
Query: 358 GRAGRLEQAEKT-ALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGD 416
G+ G L++A + + +T W +++ + HG + V +++ G D
Sbjct: 341 GKCGCLKEARRVFDRTLERSLTS---WNSMINCLALHGQSQNAISVFEEMMTCGSGVKPD 397
Query: 417 YVLMYNILAGVGRFGDAER 435
V +L G E+
Sbjct: 398 EVTFIGLLNACTHGGLVEK 416
>gi|225439325|ref|XP_002267596.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g06540-like [Vitis vinifera]
Length = 623
Score = 295 bits (755), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 154/422 (36%), Positives = 255/422 (60%), Gaps = 13/422 (3%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNL 92
+FN ++ +S +++P +AF Y Q Q+ LP D+ T+ FL+++C L ++
Sbjct: 86 IFNAMIRGHSGSKNPDQAFHFYVQSQR-----QGLLP---DNLTFPFLVKSCTKLHCISM 137
Query: 93 GTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVK 152
G+Q H I K GF+ VYV +LV+MY + G + ++ +F M ++V+W MI G K
Sbjct: 138 GSQAHGHIIKHGFEKDVYVQNSLVHMYATFGDTEAATLIFQRMYYVDVVSWTSMIRGFNK 197
Query: 153 WGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILA 212
G++E AR LF++MP +N+V+W+ +I GY + N ++A+ LF K++ + +E +++
Sbjct: 198 CGDVESARKLFDQMPEKNLVTWSTMISGYAQNNHFDKAVELF-KVLQSQGVRANETVMVS 256
Query: 213 VLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVE 272
V+ + G ++ + H Y K G T ++ + L+D YA+CG I A +FED+
Sbjct: 257 VISSCAHLGALELGERAHDYVVKNGMT-LNLILGTALVDMYARCGSIDKAVWVFEDLP-- 313
Query: 273 RKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLN 332
++ +SWT++I+G AMHG + +++ F M + GL P +TF +VL+ACSHGGLVE G
Sbjct: 314 ERDTLSWTALIAGLAMHGYSERSLKYFATMVEAGLTPRDITFTAVLSACSHGGLVERGFQ 373
Query: 333 FFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSF 392
F+ M + V P ++HYGC++D+LGRAG+LE+AE+ L +P + + VW LLGAC
Sbjct: 374 IFESMKRDHRVEPRLEHYGCMVDLLGRAGKLEEAERFVLKMPVK-PNAPVWGALLGACRI 432
Query: 393 HGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCS 452
H N E+GERV + ++++ + G YVL+ NI A + +R++M + K PG S
Sbjct: 433 HKNAEIGERVGKILIQLLPQHSGYYVLLSNIYANAKEWEKVTEMRQMMKAKGLKKPPGHS 492
Query: 453 LV 454
L+
Sbjct: 493 LI 494
>gi|224129498|ref|XP_002320601.1| predicted protein [Populus trichocarpa]
gi|222861374|gb|EEE98916.1| predicted protein [Populus trichocarpa]
Length = 629
Score = 294 bits (753), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 163/432 (37%), Positives = 255/432 (59%), Gaps = 7/432 (1%)
Query: 26 SLLHHSQLFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFD--SFTYSFLIRT 83
S +HH F+ +LA+S L+ + SH L + FT+ +++
Sbjct: 73 SQIHHPNCFSWNTIIRALADSDDDDLFHVNSLEALLYFSHMLTDGLVEPNKFTFPCVLKA 132
Query: 84 CATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMP-ERNLVT 142
CA L+ G QLH + K+G S +V + LV +YV G +KD+ LF + E N+V
Sbjct: 133 CAKLARIEEGKQLHGFVVKLGLVSDEFVRSNLVRVYVMCGAMKDAHVLFYQTRLEGNVVL 192
Query: 143 WNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEY 202
WNVMI G V+ G+L +R LF+ MP ++VVSW +I G + EA+ +F M +
Sbjct: 193 WNVMIDGYVRMGDLRASRELFDSMPNKSVVSWNVMISGCAQNGHFKEAIEMFHDMQLGD- 251
Query: 203 TEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSA 262
P+ +T+++VLPA+ + G ++ + +H + EK D+ + + LID Y+KCG I A
Sbjct: 252 VPPNYVTLVSVLPAVSRLGAIELGKWVHLFAEKNEIEIDDV-LGSALIDMYSKCGSIDKA 310
Query: 263 SKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACS 322
++FE I +KN ++W++II G AMHG ++A+++F RMQ+ G+ P+ V ++ VL+ACS
Sbjct: 311 VQVFEGIR-NKKNPITWSAIIGGLAMHGRARDALDHFWRMQQAGVTPSDVVYIGVLSACS 369
Query: 323 HGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVV 382
H GLVEEG + + MV +LP I+HYGC++D+LGRAG LE+AE+ L +P + DV++
Sbjct: 370 HAGLVEEGRSIYYHMVNIVGLLPRIEHYGCMVDLLGRAGCLEEAEQLILNMPVKPDDVIL 429
Query: 383 WRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDE 442
+ LLGAC HGN+EMGER+ + ++ G YV + N+ A G + ++R M E
Sbjct: 430 -KALLGACKMHGNIEMGERIAKILMGWYPHDSGSYVALSNMFASEGNWEGVVKVRLKMKE 488
Query: 443 RNAFKVPGCSLV 454
+ K PGCS +
Sbjct: 489 LDIRKDPGCSWI 500
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 93/348 (26%), Positives = 146/348 (41%), Gaps = 66/348 (18%)
Query: 81 IRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGF---LKDSSKLFDEMPE 137
I C T H Q+HA K G Q H + A + +++L +K + K F ++
Sbjct: 22 ISRCKTTRHLK---QIHAHFIKTG-QIHHPLAAAELLKFLTLSTQREIKYARKFFSQIHH 77
Query: 138 RNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKM 197
N +WN +I L LF S EAL F M
Sbjct: 78 PNCFSWNTIIRALAD----SDDDDLFHV--------------------NSLEALLYFSHM 113
Query: 198 VACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTA----------------- 240
+ EP++ T VL A + ++ + +HG+ K G +
Sbjct: 114 LTDGLVEPNKFTFPCVLKACAKLARIEEGKQLHGFVVKLGLVSDEFVRSNLVRVYVMCGA 173
Query: 241 -FDIRVL-------------NCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGF 286
D VL N +ID Y + G + ++ +LF+ S+ K++VSW +ISG
Sbjct: 174 MKDAHVLFYQTRLEGNVVLWNVMIDGYVRMGDLRASRELFD--SMPNKSVVSWNVMISGC 231
Query: 287 AMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPD 346
A +G KEA+E F MQ + PN VT +SVL A S G +E G + E+ E+ D
Sbjct: 232 AQNGHFKEAIEMFHDMQLGDVPPNYVTLVSVLPAVSRLGAIELG-KWVHLFAEKNEIEID 290
Query: 347 IKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHG 394
LIDM + G +++A + GI ++ + + W ++G + HG
Sbjct: 291 DVLGSALIDMYSKCGSIDKAVQVFEGIRNK-KNPITWSAIIGGLAMHG 337
>gi|15221306|ref|NP_177601.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169836|sp|Q9CA54.1|PP122_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g74630
gi|12324801|gb|AAG52363.1|AC011765_15 hypothetical protein; 86841-88772 [Arabidopsis thaliana]
gi|332197495|gb|AEE35616.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 643
Score = 293 bits (750), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 161/453 (35%), Positives = 260/453 (57%), Gaps = 42/453 (9%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNL 92
+FNTL+ YS ++ P + ++ ++ + P DSF+++F+I+
Sbjct: 72 MFNTLVRGYSESDEPHNSVAVFVEMMR----KGFVFP---DSFSFAFVIKAVENFRSLRT 124
Query: 93 GTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLV----------- 141
G Q+H K G +SH++V T L+ MY G ++ + K+FDEM + NLV
Sbjct: 125 GFQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFR 184
Query: 142 --------------------TWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGY 181
+WNVM+ G +K GELE A+ +F EMP R+ VSW+ +I G
Sbjct: 185 GNDVAGAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGI 244
Query: 182 TRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAF 241
NE+ FR++ + P+E+++ VL A Q+G + +++HG+ EK G++ +
Sbjct: 245 AHNGSFNESFLYFRELQRAGMS-PNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYS-W 302
Query: 242 DIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGR 301
+ V N LID Y++CG + A +FE + E++ +VSWTS+I+G AMHG G+EAV F
Sbjct: 303 IVSVNNALIDMYSRCGNVPMARLVFEGMQ-EKRCIVSWTSMIAGLAMHGQGEEAVRLFNE 361
Query: 302 MQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAG 361
M G+ P+ ++F+S+L+ACSH GL+EEG ++F +M + P+I+HYGC++D+ GR+G
Sbjct: 362 MTAYGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSG 421
Query: 362 RLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMY 421
+L++A +P T +VWRTLLGACS HGN+E+ E+V +++ E++ GD VL+
Sbjct: 422 KLQKAYDFICQMPIPPT-AIVWRTLLGACSSHGNIELAEQVKQRLNELDPNNSGDLVLLS 480
Query: 422 NILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
N A G++ D +R+ M + K SLV
Sbjct: 481 NAYATAGKWKDVASIRKSMIVQRIKKTTAWSLV 513
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 108/250 (43%), Gaps = 20/250 (8%)
Query: 156 LEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLP 215
L +AR L P + + ++ GY+ + + ++A+F +M+ + P + V+
Sbjct: 55 LPYARRLLLCFPEPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIK 114
Query: 216 AIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKN 275
A+ +++ +H K G + + V LI Y CGC+ A K+F+++ + N
Sbjct: 115 AVENFRSLRTGFQMHCQALKHGLES-HLFVGTTLIGMYGGCGCVEFARKVFDEM--HQPN 171
Query: 276 LVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFD 335
LV+W ++I+ A E F +M L N ++ +L G +E F
Sbjct: 172 LVAWNAVITACFRGNDVAGAREIFDKM----LVRNHTSWNVMLAGYIKAGELESAKRIFS 227
Query: 336 KMVEECEV-----LPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGAC 390
+M +V + I H G + L++A + P+E++ V L AC
Sbjct: 228 EMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMS----PNEVSLTGV----LSAC 279
Query: 391 SFHGNVEMGE 400
S G+ E G+
Sbjct: 280 SQSGSFEFGK 289
>gi|62318827|dbj|BAD93880.1| hypothetical protein [Arabidopsis thaliana]
gi|62318835|dbj|BAD93890.1| hypothetical protein [Arabidopsis thaliana]
Length = 635
Score = 293 bits (750), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 161/453 (35%), Positives = 260/453 (57%), Gaps = 42/453 (9%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNL 92
+FNTL+ YS ++ P + ++ ++ + P DSF+++F+I+
Sbjct: 64 MFNTLVRGYSESDEPHNSVAVFVEMMR----KGFVFP---DSFSFAFVIKAVENFRSLRT 116
Query: 93 GTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLV----------- 141
G Q+H K G +SH++V T L+ MY G ++ + K+FDEM + NLV
Sbjct: 117 GFQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFR 176
Query: 142 --------------------TWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGY 181
+WNVM+ G +K GELE A+ +F EMP R+ VSW+ +I G
Sbjct: 177 GNDVAGAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGI 236
Query: 182 TRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAF 241
NE+ FR++ + P+E+++ VL A Q+G + +++HG+ EK G++ +
Sbjct: 237 AHNGSFNESFLYFRELQRAGMS-PNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYS-W 294
Query: 242 DIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGR 301
+ V N LID Y++CG + A +FE + E++ +VSWTS+I+G AMHG G+EAV F
Sbjct: 295 IVSVNNALIDMYSRCGNVPMARLVFEGMQ-EKRCIVSWTSMIAGLAMHGQGEEAVRLFNE 353
Query: 302 MQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAG 361
M G+ P+ ++F+S+L+ACSH GL+EEG ++F +M + P+I+HYGC++D+ GR+G
Sbjct: 354 MTAYGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSG 413
Query: 362 RLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMY 421
+L++A +P T +VWRTLLGACS HGN+E+ E+V +++ E++ GD VL+
Sbjct: 414 KLQKAYDFICQMPIPPT-AIVWRTLLGACSSHGNIELAEQVKQRLNELDPNNSGDLVLLS 472
Query: 422 NILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
N A G++ D +R+ M + K SLV
Sbjct: 473 NAYATAGKWKDVASIRKSMIVQRIKKTTAWSLV 505
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 108/250 (43%), Gaps = 20/250 (8%)
Query: 156 LEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLP 215
L +AR L P + + ++ GY+ + + ++A+F +M+ + P + V+
Sbjct: 47 LPYARRLLLCFPEPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIK 106
Query: 216 AIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKN 275
A+ +++ +H K G + + V LI Y CGC+ A K+F+++ + N
Sbjct: 107 AVENFRSLRTGFQMHCQALKHGLES-HLFVGTTLIGMYGGCGCVEFARKVFDEM--HQPN 163
Query: 276 LVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFD 335
LV+W ++I+ A E F +M L N ++ +L G +E F
Sbjct: 164 LVAWNAVITACFRGNDVAGAREIFDKM----LVRNHTSWNVMLAGYIKAGELESAKRIFS 219
Query: 336 KMVEECEV-----LPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGAC 390
+M +V + I H G + L++A + P+E++ V L AC
Sbjct: 220 EMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMS----PNEVSLTGV----LSAC 271
Query: 391 SFHGNVEMGE 400
S G+ E G+
Sbjct: 272 SQSGSFEFGK 281
>gi|357483509|ref|XP_003612041.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355513376|gb|AES94999.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 518
Score = 293 bits (749), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 155/423 (36%), Positives = 250/423 (59%), Gaps = 15/423 (3%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNL 92
++NT++ YS + P++A LLY Q+ H +P +++T+ FL++ C+ LS
Sbjct: 78 MWNTMIRAYSNSNDPEEALLLYHQML------HHSIP--HNAYTFPFLLKACSALSALAE 129
Query: 93 GTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVK 152
Q+H I K GF S VY +L+ +Y G +K + LFD +P R++V+WN MI G +K
Sbjct: 130 THQIHVQIIKRGFGSEVYATNSLLRVYAISGSIKSAHVLFDLLPSRDIVSWNTMIDGYIK 189
Query: 153 WGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILA 212
G +E A +F+ MP +NV+SWT +I G+ R EAL L ++M+ +P +IT+
Sbjct: 190 CGNVEMAYKIFQAMPEKNVISWTSMIVGFVRTGMHKEALCLLQQMLVAG-IKPDKITLSC 248
Query: 213 VLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNC-LIDTYAKCGCIFSASKLFEDISV 271
L A G ++ + IH Y K VL C LID Y KCG + A +F +
Sbjct: 249 SLSACAGLGALEQGKWIHTYIGKNKIKIDP--VLGCALIDMYVKCGEMKKALLVFSKL-- 304
Query: 272 ERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGL 331
E+K + +WT+II GFA+HG G EA++ F +MQK G+KP TF +VL ACSH GLVEEG
Sbjct: 305 EKKCVYTWTAIIGGFAVHGKGSEALDWFTQMQKAGIKPTSFTFTAVLTACSHTGLVEEGK 364
Query: 332 NFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACS 391
+ F+ M + P ++HYGC++D+LGRAG L++A++ +P + + +W +LL AC
Sbjct: 365 SLFESMSTFYNMKPVMEHYGCMVDLLGRAGFLKEAKEFVESMPIK-PNAAIWGSLLNACH 423
Query: 392 FHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGC 451
H ++E+G+ + + ++E++ + G Y+ + +I A G + +A ++R + + +PGC
Sbjct: 424 LHKHLELGKEIGKFLIELDPEHDGRYIHLASIHAAAGEWDEASQVRSHIKNKGLLNLPGC 483
Query: 452 SLV 454
S +
Sbjct: 484 STI 486
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 127/276 (46%), Gaps = 38/276 (13%)
Query: 151 VKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACE-----YTEP 205
+++ L +AR +F+ + N V W +I Y+ N EAL L+ +M+ YT P
Sbjct: 56 MEFSNLTYARMVFDRISSPNTVMWNTMIRAYSNSNDPEEALLLYHQMLHHSIPHNAYTFP 115
Query: 206 SEITILAVLPAIWQNGDVKSCQLIHGYGE------------------KRGFTAF------ 241
+ + L A+ + + + G+G K F
Sbjct: 116 FLLKACSALSALAETHQIHVQIIKRGFGSEVYATNSLLRVYAISGSIKSAHVLFDLLPSR 175
Query: 242 DIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGR 301
DI N +ID Y KCG + A K+F+ ++ KN++SWTS+I GF GM KEA+ +
Sbjct: 176 DIVSWNTMIDGYIKCGNVEMAYKIFQ--AMPEKNVISWTSMIVGFVRTGMHKEALCLLQQ 233
Query: 302 MQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAG 361
M G+KP+++T L+AC+ G +E+G + + + ++ D LIDM + G
Sbjct: 234 MLVAGIKPDKITLSCSLSACAGLGALEQG-KWIHTYIGKNKIKIDPVLGCALIDMYVKCG 292
Query: 362 RLEQAEKTALGIPSEITD--VVVWRTLLGACSFHGN 395
+ K AL + S++ V W ++G + HG
Sbjct: 293 EM----KKALLVFSKLEKKCVYTWTAIIGGFAVHGK 324
>gi|224138230|ref|XP_002322762.1| predicted protein [Populus trichocarpa]
gi|222867392|gb|EEF04523.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 292 bits (748), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 150/421 (35%), Positives = 255/421 (60%), Gaps = 13/421 (3%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNL 92
++N+ + +S ++ P K+F Y Q ++ + L P D+ TY FL++ C ++
Sbjct: 80 IYNSFIRGFSGSKDPDKSFHFYVQSKR------NGLVP--DNLTYPFLVKACTQKGSLDM 131
Query: 93 GTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVK 152
G Q H I + GF S VYV +LV MY +LG +K +S +F + ++V+W M+ G +K
Sbjct: 132 GIQAHGQIIRHGFDSDVYVQNSLVTMYSTLGDIKSASYVFRRISCLDVVSWTSMVAGYIK 191
Query: 153 WGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILA 212
G++ AR LF++MP +N+V+W+ +I GY + + ++A+ L+ ++ E +E +++
Sbjct: 192 SGDVTSARKLFDKMPEKNLVTWSVMISGYAKNSFFDKAIELYF-LLQSEGVHANETVMVS 250
Query: 213 VLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVE 272
V+ + G ++ + H Y + T ++ + L+D YA+CG I A +F+ +
Sbjct: 251 VIASCAHLGALELGERAHDYILRNKMTV-NLILGTALVDMYARCGSIDKAIWVFDQLP-- 307
Query: 273 RKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLN 332
++ +SWT++I+GFAMHG ++A+E F RM+K GL P +TF +VL+ACSHGGLVE GL
Sbjct: 308 GRDALSWTTLIAGFAMHGYAEKALEYFSRMEKAGLTPREITFTAVLSACSHGGLVERGLE 367
Query: 333 FFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSF 392
F+ M + + P ++HYGC++D+LGRAG+L +AEK +P + + +W LLGAC
Sbjct: 368 LFESMKRDYRIEPRLEHYGCMVDLLGRAGKLAEAEKFVNEMPMK-PNAPIWGALLGACRI 426
Query: 393 HGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCS 452
H N E+ ER + ++E++ + G YVL+ NI A ++ + E +R++M ER K PG +
Sbjct: 427 HKNSEIAERAGKTLIELKPEHSGYYVLLSNIYARTNKWENVENIRQMMKERGVVKPPGYT 486
Query: 453 L 453
L
Sbjct: 487 L 487
Score = 46.2 bits (108), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 76/173 (43%), Gaps = 5/173 (2%)
Query: 236 RGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEA 295
R T FD+ +CLI + A+++F I + NL + S I GF+ ++
Sbjct: 40 RAHTIFDVFAASCLISISINKNLLDYAAQVFYQI--QNPNLFIYNSFIRGFSGSKDPDKS 97
Query: 296 VENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLID 355
+ + ++ GL P+ +T+ ++ AC+ G ++ G+ +++ D+ L+
Sbjct: 98 FHFYVQSKRNGLVPDNLTYPFLVKACTQKGSLDMGIQAHGQIIRHG-FDSDVYVQNSLVT 156
Query: 356 MLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILE 408
M G ++ A I DVV W +++ G+V ++ K+ E
Sbjct: 157 MYSTLGDIKSASYVFRRISC--LDVVSWTSMVAGYIKSGDVTSARKLFDKMPE 207
>gi|147771061|emb|CAN60969.1| hypothetical protein VITISV_033859 [Vitis vinifera]
Length = 722
Score = 292 bits (748), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 165/428 (38%), Positives = 264/428 (61%), Gaps = 21/428 (4%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLI--RTCATLSHP 90
+NTL+ YS + SP ++ L+ Q+++ + + P D FT++FL+ R+ + P
Sbjct: 308 FYNTLIRGYSKSSSPSQSVQLFNQMRR------NCVDP--DGFTFTFLLKGRSRMRIDLP 359
Query: 91 NL--GTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMIT 148
+ ++H + K+GF H++V AL+++Y + G + ++F+EM ++V+W+ ++
Sbjct: 360 LIVASDEIHGAVLKLGFCFHLFVMNALIHLYAARGVPAAAHQVFNEMVGADVVSWSGLVV 419
Query: 149 GLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEI 208
V+ GELE AR +F+EMP R+VVSWT ++ GY + RS EAL LFR+M P E+
Sbjct: 420 AHVRAGELELARQVFDEMPERDVVSWTVMVSGYAQAKRSREALELFREMRDVG-VRPDEV 478
Query: 209 TILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFED 268
++ V+ A GD+++ +H Y ++ GF + + + N LID YAKCGC+ A ++F +
Sbjct: 479 AMVIVISACTSLGDLETGFEVHRYIDENGF-GWMVSLCNALIDMYAKCGCMDLAWQVFNN 537
Query: 269 ISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVE 328
+ ERK+L++W S+IS A HG ++A F M G++P+ VTFL++L A +H G V+
Sbjct: 538 M--ERKSLITWNSMISACANHGNAEDAFRVFTLMLXSGIRPDGVTFLALLTAYTHKGWVD 595
Query: 329 EGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEK--TALGIPSEITDVVVWRTL 386
+G F+ M + V ++HYGC++DMLGRAGRLE+A K T++ +P + VVW L
Sbjct: 596 DGYGLFESMQRDYGVEAGVEHYGCMVDMLGRAGRLEEAYKLITSMSMP---CNDVVWGAL 652
Query: 387 LGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAF 446
L AC +G+VEMGERV +K++E++ GG Y+L+ +I GR +A LRR MD A
Sbjct: 653 LAACRIYGDVEMGERVLKKLIELKPDEGGYYILLRDIYVAAGRRAEAIELRRAMDVNGAK 712
Query: 447 KVPGCSLV 454
K GCS V
Sbjct: 713 KTLGCSWV 720
>gi|296088765|emb|CBI38215.3| unnamed protein product [Vitis vinifera]
Length = 595
Score = 292 bits (747), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 158/416 (37%), Positives = 236/416 (56%), Gaps = 39/416 (9%)
Query: 73 DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLF 132
D++T F+++ CA G ++H K+G S VYV+ L+ MY ++ + K+F
Sbjct: 139 DNYTIPFVLKACAESRAVREGEEVHGQAIKMGLASDVYVSNTLMRMYAVCDVIRSARKVF 198
Query: 133 DEMPERNLVTWNVMITGLVKWG----------------------------------ELEF 158
D P+R+LV+W MI G VK G + F
Sbjct: 199 DTSPQRDLVSWTTMIQGYVKMGFAREGVGLYIIRNSNVNLDVFVGNALVDMYLKCGDANF 258
Query: 159 ARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIW 218
AR +F+EMP +NVVSW +I G + + E+L +FRKM +P ++T++AVL +
Sbjct: 259 ARKVFQEMPVKNVVSWNSMISGLAQKGQFKESLYMFRKMQRLG-VKPDDVTLVAVLNSCA 317
Query: 219 QNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVS 278
G ++ + +H Y ++ A D + N L+D YAKCG I A +F+ ++ RK++ S
Sbjct: 318 NLGVLELGKWVHAYLDRNQIRA-DGFIGNALVDMYAKCGSIDQACWVFQ--AMNRKDVYS 374
Query: 279 WTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMV 338
+T++I G AMHG G +A++ F M K+G++P+ VTF+ VL ACSH GLVEEG +F+ M
Sbjct: 375 YTAMIVGLAMHGQGGKALDLFSEMPKMGIEPDEVTFVGVLTACSHVGLVEEGRKYFEDMS 434
Query: 339 EECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEM 398
+ P ++HYGC++D+LGRAG + +AE+ +P E D V LLGAC HG VE+
Sbjct: 435 TIYNLRPQLEHYGCMVDLLGRAGLINEAEEFIRNMPIE-PDAFVLGALLGACKIHGKVEL 493
Query: 399 GERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
GE V +KI ++E G YVLM NI + R+ DA +LR+ M ERN K PGCS +
Sbjct: 494 GESVMKKIEKIEPRKDGAYVLMSNIYSSANRWRDALKLRKTMKERNLEKTPGCSSI 549
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 77/253 (30%), Positives = 125/253 (49%), Gaps = 23/253 (9%)
Query: 158 FARSLFEEMPCRNVVSWTGIIDGY-TRMNRSNEALALFRKMVACEYTEPSEITILAVLPA 216
+A SL ++ N+ + II G T N S E L ++++M++ + P TI VL A
Sbjct: 91 YALSLLAQLRTPNLPLYNAIIRGLATSNNDSIEGLVVYKQMLS-KGIVPDNYTIPFVLKA 149
Query: 217 IWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNL 276
++ V+ + +HG K G A D+ V N L+ YA C I SA K+F D S +R +L
Sbjct: 150 CAESRAVREGEEVHGQAIKMGL-ASDVYVSNTLMRMYAVCDVIRSARKVF-DTSPQR-DL 206
Query: 277 VSWTSIISGFAMHGMGKEAVENF-GRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFD 335
VSWT++I G+ G +E V + R V L + V NA L NF
Sbjct: 207 VSWTTMIQGYVKMGFAREGVGLYIIRNSNVNLD------VFVGNALVDMYLKCGDANFAR 260
Query: 336 KMVEECEVLPDIKHYGCLIDMLGRAGRLEQA-----EKTALGI-PSEITDVVVWRTLLGA 389
K+ +E V ++ + +I L + G+ +++ + LG+ P ++T V V L +
Sbjct: 261 KVFQEMPV-KNVVSWNSMISGLAQKGQFKESLYMFRKMQRLGVKPDDVTLVAV----LNS 315
Query: 390 CSFHGNVEMGERV 402
C+ G +E+G+ V
Sbjct: 316 CANLGVLELGKWV 328
>gi|413946997|gb|AFW79646.1| hypothetical protein ZEAMMB73_771020 [Zea mays]
Length = 505
Score = 291 bits (746), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 145/346 (41%), Positives = 222/346 (64%), Gaps = 5/346 (1%)
Query: 107 SHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEM 166
S +V+++LV +Y + G + D+ +FDEM R++V WNVMI G VK G+ AR LF+ M
Sbjct: 111 SDAHVSSSLVQLYCTCGHVADARSVFDEMAVRDVVAWNVMIAGYVKAGDQAHARELFDAM 170
Query: 167 PCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSC 226
P RNVVSWT +I GY +M R +A+ +FR+M E E + +L+VL A G V
Sbjct: 171 PERNVVSWTTVIGGYAQMKRPEKAVEVFRRM-QVEGIEADGVALLSVLAACGDLGAVDLG 229
Query: 227 QLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGF 286
+ +H + +RG +I ++N +ID Y KCGCI A ++FE +E K++V+WT++I+GF
Sbjct: 230 EWVHRFVVRRGLCQ-EIPLMNSIIDMYMKCGCIEKAVEVFE--GMEEKSVVTWTTLIAGF 286
Query: 287 AMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPD 346
A+HG+G +AVE F RM++ + PN VTFL++L+ACSH GL + G +F+ MV + + P
Sbjct: 287 ALHGLGLQAVEMFCRMERENMAPNAVTFLAILSACSHVGLTDLGRWYFNIMVSQYRIKPR 346
Query: 347 IKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKI 406
++HYGC++D+LGRAG L++A+ +P + + +W LL A HG+ +GE+ +
Sbjct: 347 VEHYGCMVDLLGRAGCLKEAQDLVKNMPLK-ANAAIWGALLAAARTHGDAGLGEQALLHL 405
Query: 407 LEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCS 452
+E+E G+Y+L+ NI A R+GD +LR+ M ER VPG S
Sbjct: 406 IELEPNNSGNYILLSNIFAEQERWGDVSKLRKAMRERGLRNVPGAS 451
>gi|225431281|ref|XP_002268784.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Vitis vinifera]
Length = 647
Score = 291 bits (746), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 163/425 (38%), Positives = 245/425 (57%), Gaps = 16/425 (3%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNL 92
L+ L+ Y+L ++ LLY +++ + P+ SFT++ L++ C+ NL
Sbjct: 106 LWTALIRGYALQGPFMESVLLYNSMRR------QGIGPV--SFTFTALLKACSAALDVNL 157
Query: 93 GTQLHA-VISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLV 151
G Q+H I GF S +YV L++MYV G L ++FDEM +R++++W +I
Sbjct: 158 GRQVHTQTILIGGFGSDLYVGNTLIDMYVKCGCLGCGHRVFDEMLDRDVISWTSLIVAYA 217
Query: 152 KWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITIL 211
K G +E A LF+ +P +++V+WT ++ GY + R EAL +F +M A + E+T++
Sbjct: 218 KVGNMEAASELFDGLPMKDMVAWTAMVTGYAQNARPREALEVFERMQAAG-VKTDEVTLV 276
Query: 212 AVLPAIWQNGDVKSCQLIHGYGEKRGF-TAFDIRVLNCLIDTYAKCGCIFSASKLFEDIS 270
V+ A Q G K + E+ GF ++ V + LID YAKCG + A K+FE
Sbjct: 277 GVISACAQLGAAKYANWVRDVAEQSGFGPTSNVVVGSALIDMYAKCGSVEDAYKVFE--R 334
Query: 271 VERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEG 330
+E +N+ S++S+I GFAMHG+ A+E F M K +KPNRVTF+ VL ACSH G+VE+G
Sbjct: 335 MEERNVYSYSSMIVGFAMHGLAGAAMELFDEMLKTEIKPNRVTFIGVLTACSHAGMVEQG 394
Query: 331 LNFFDKMVEECE-VLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGA 389
F M+EEC V P HY C++D+LGRAGRLE+A +P VW LLGA
Sbjct: 395 QQLF-AMMEECHGVAPSEDHYACMVDLLGRAGRLEEALNLVKMMPMN-PHGGVWGALLGA 452
Query: 390 CSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVP 449
C HGN +M + + E+E G+Y+L+ NI A GR+ D ++R++M + K P
Sbjct: 453 CRIHGNPDMAQIAASHLFELEPNGIGNYILLSNIYASAGRWDDVSKVRKLMRAKGLKKNP 512
Query: 450 GCSLV 454
GCS V
Sbjct: 513 GCSWV 517
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 87/352 (24%), Positives = 145/352 (41%), Gaps = 74/352 (21%)
Query: 158 FARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAI 217
+ R +F+++ N WT +I GY E++ L+ M + P T A+L A
Sbjct: 91 YPRLVFQQVEYPNPFLWTALIRGYALQGPFMESVLLYNSMRR-QGIGPVSFTFTALLKAC 149
Query: 218 WQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDI-------- 269
DV + +H G D+ V N LID Y KCGC+ ++F+++
Sbjct: 150 SAALDVNLGRQVHTQTILIGGFGSDLYVGNTLIDMYVKCGCLGCGHRVFDEMLDRDVISW 209
Query: 270 ---------------------SVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLK 308
+ K++V+WT++++G+A + +EA+E F RMQ G+K
Sbjct: 210 TSLIVAYAKVGNMEAASELFDGLPMKDMVAWTAMVTGYAQNARPREALEVFERMQAAGVK 269
Query: 309 PNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLP--DIKHYGCLIDMLGRAGRLEQA 366
+ VT + V++AC+ G + N+ + E+ P ++ LIDM + G +E A
Sbjct: 270 TDEVTLVGVISACAQLGAAKYA-NWVRDVAEQSGFGPTSNVVVGSALIDMYAKCGSVEDA 328
Query: 367 EKT-----------------------ALGIPSEITD----------VVVWRTLLGACSFH 393
K G E+ D V + +L ACS
Sbjct: 329 YKVFERMEERNVYSYSSMIVGFAMHGLAGAAMELFDEMLKTEIKPNRVTFIGVLTACSHA 388
Query: 394 GNVEMGERVTRKILEMERGYG-----GDYVLMYNILAGVGRFGDAERLRRVM 440
G VE G+++ ME +G Y M ++L GR +A L ++M
Sbjct: 389 GMVEQGQQL---FAMMEECHGVAPSEDHYACMVDLLGRAGRLEEALNLVKMM 437
>gi|359489007|ref|XP_002278681.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Vitis vinifera]
Length = 663
Score = 291 bits (745), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 165/428 (38%), Positives = 264/428 (61%), Gaps = 21/428 (4%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLI--RTCATLSHP 90
+NTL+ YS + SP ++ L+ Q+++ + + P D FT++FL+ R+ + P
Sbjct: 249 FYNTLIRGYSKSSSPSQSVQLFNQMRR------NCVDP--DGFTFTFLLKGRSRMRIDLP 300
Query: 91 NL--GTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMIT 148
+ ++H + K+GF H++V AL+++Y + G + ++F+EM ++V+W+ ++
Sbjct: 301 LIVASDEIHGAVLKLGFCFHLFVMNALIHLYAARGVPAAAHQVFNEMVGADVVSWSGLVV 360
Query: 149 GLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEI 208
V+ GELE AR +F EMP R+VVSWT ++ GY + RS EAL LFR+M P E+
Sbjct: 361 AHVRAGELELARQVFYEMPERDVVSWTVMVSGYAQAKRSREALELFREMRDVG-VRPDEV 419
Query: 209 TILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFED 268
+++V+ A GD+++ +H Y ++ GF + + + N LID YAKCGC+ A ++F +
Sbjct: 420 AMVSVISACTSLGDLETGFEVHRYIDENGF-GWMVSLCNALIDMYAKCGCMDLAWQVFNN 478
Query: 269 ISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVE 328
+ ERK+L++W S+IS A HG ++A F M G++P+ VTFL++L A +H G V+
Sbjct: 479 M--ERKSLITWNSMISACANHGNAEDAFRVFTLMLYSGIRPDGVTFLALLTAYTHKGWVD 536
Query: 329 EGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEK--TALGIPSEITDVVVWRTL 386
+G F+ M + V ++HYGC++DMLGRAGRLE+A K T++ +P + VVW L
Sbjct: 537 DGYGLFESMQRDYGVEAGVEHYGCMVDMLGRAGRLEEAYKLITSMSMP---CNDVVWGAL 593
Query: 387 LGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAF 446
L AC +G+VEMGERV +K++E++ GG Y+L+ +I GR +A LRR MD A
Sbjct: 594 LAACRIYGDVEMGERVLKKLIELKPDEGGYYILLRDIYVAAGRRAEAIELRRAMDVNGAK 653
Query: 447 KVPGCSLV 454
K GCS V
Sbjct: 654 KTLGCSWV 661
>gi|449443909|ref|XP_004139718.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 642
Score = 291 bits (745), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 154/398 (38%), Positives = 242/398 (60%), Gaps = 21/398 (5%)
Query: 73 DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLF 132
+ FT+ +++ CA S G Q+H +I K GF +V + LV MYV ++D+ LF
Sbjct: 121 NRFTFPSVLKACARASRLREGKQIHGLIVKFGFHEDEFVISNLVRMYVMCAVMEDAYSLF 180
Query: 133 ------------DEMPER----NLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTG 176
E+ +R N+V WN+MI G V+ G+++ A++LF+EMP R+VVSW
Sbjct: 181 CKNVVDFDGSCQMELDKRKQDGNVVLWNIMIDGQVRLGDIKSAKNLFDEMPQRSVVSWNV 240
Query: 177 IIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKR 236
+I GY + EA+ LF++M + +P+ +T+++VLPAI + G ++ + IH Y K
Sbjct: 241 MISGYAQNGHFIEAINLFQEMQSSN-IDPNYVTLVSVLPAIARIGALELGKWIHLYAGKN 299
Query: 237 GFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAV 296
D+ + + L+D Y+KCG I A ++FE ++ ++N ++W++II FAMHG ++A+
Sbjct: 300 KIEIDDV-LGSALVDMYSKCGSIDEALQVFE--TLPKRNAITWSAIIGAFAMHGRAEDAI 356
Query: 297 ENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDM 356
+F M K G+ PN V ++ +L+ACSH GLVEEG +FF MV+ + P I+HYGC++D+
Sbjct: 357 IHFHLMGKAGVTPNDVAYIGILSACSHAGLVEEGRSFFSHMVKVVGLQPRIEHYGCMVDL 416
Query: 357 LGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGD 416
LGRAG LE+AE+ +P E D V+W+ LLGAC H N++MGERV ++E+ G
Sbjct: 417 LGRAGHLEEAEELIRNMPIEPDD-VIWKALLGACKMHKNLKMGERVAETLMELAPHDSGS 475
Query: 417 YVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
YV + N+ A +G + R+R M + K PGCS +
Sbjct: 476 YVALSNLYASLGNWEAVARVRLKMKGMDIRKDPGCSWI 513
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 92/360 (25%), Positives = 159/360 (44%), Gaps = 41/360 (11%)
Query: 62 THSHSPLPPLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVG-FQSHVYVNTALVNMYV 120
T + SP PPL S ++ +C T P QLHA+ K G Q + +
Sbjct: 11 TFNFSPQPPLILSKPFT----SCKT---PRDLKQLHAIFIKTGQIQDPLTAAEVIKFCAF 63
Query: 121 SLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEF---ARSLFEEMPCR-----NVV 172
S + + +F +MPE N WN ++ L + + A LF M C N
Sbjct: 64 SSRDIDYARAVFRQMPEPNCFCWNTILRVLAETNDEHLQSEALMLFSAMLCDGRVKPNRF 123
Query: 173 SWTGIIDGYTRMNRSNEALALFRKMVACEYTEP----SEITILAVLPAIWQNGDVKSCQL 228
++ ++ R +R E + +V + E S + + V+ A+ ++ C+
Sbjct: 124 TFPSVLKACARASRLREGKQIHGLIVKFGFHEDEFVISNLVRMYVMCAVMEDAYSLFCKN 183
Query: 229 IHGYG-------EKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTS 281
+ + +KR ++ + N +ID + G I SA LF+++ ++++VSW
Sbjct: 184 VVDFDGSCQMELDKRKQDG-NVVLWNIMIDGQVRLGDIKSAKNLFDEMP--QRSVVSWNV 240
Query: 282 IISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEG----LNFFDKM 337
+ISG+A +G EA+ F MQ + PN VT +SVL A + G +E G L
Sbjct: 241 MISGYAQNGHFIEAINLFQEMQSSNIDPNYVTLVSVLPAIARIGALELGKWIHLYAGKNK 300
Query: 338 VEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVE 397
+E +VL L+DM + G +++A + +P + + W ++GA + HG E
Sbjct: 301 IEIDDVLG-----SALVDMYSKCGSIDEALQVFETLPKR--NAITWSAIIGAFAMHGRAE 353
>gi|449475532|ref|XP_004154482.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 642
Score = 291 bits (745), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 154/398 (38%), Positives = 242/398 (60%), Gaps = 21/398 (5%)
Query: 73 DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLF 132
+ FT+ +++ CA S G Q+H +I K GF +V + LV MYV ++D+ LF
Sbjct: 121 NRFTFPSVLKACARASRLREGKQIHGLIVKFGFHEDEFVISNLVRMYVMCAVMEDAYSLF 180
Query: 133 ------------DEMPER----NLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTG 176
E+ +R N+V WN+MI G V+ G+++ A++LF+EMP R+VVSW
Sbjct: 181 CKNVVDFDGSCQMELDKRKQDGNVVLWNIMIDGQVRLGDIKSAKNLFDEMPPRSVVSWNV 240
Query: 177 IIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKR 236
+I GY + EA+ LF++M + +P+ +T+++VLPAI + G ++ + IH Y K
Sbjct: 241 MISGYAQNGHFIEAINLFQEMQSSN-IDPNYVTLVSVLPAIARIGALELGKWIHLYAGKN 299
Query: 237 GFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAV 296
D+ + + L+D Y+KCG I A ++FE ++ ++N ++W++II FAMHG ++A+
Sbjct: 300 KVEIDDV-LGSALVDMYSKCGSIDKALQVFE--TLPKRNAITWSAIIGAFAMHGRAEDAI 356
Query: 297 ENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDM 356
+F M K G+ PN V ++ +L+ACSH GLVEEG +FF MV+ + P I+HYGC++D+
Sbjct: 357 IHFHLMGKAGVTPNDVAYIGILSACSHAGLVEEGRSFFSHMVKVVGLQPRIEHYGCMVDL 416
Query: 357 LGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGD 416
LGRAG LE+AE+ +P E D V+W+ LLGAC H N++MGERV ++E+ G
Sbjct: 417 LGRAGHLEEAEELIRNMPIEPDD-VIWKALLGACKMHKNLKMGERVAETLMELAPHDSGS 475
Query: 417 YVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
YV + N+ A +G + R+R M + K PGCS +
Sbjct: 476 YVALSNLYASLGNWEAVARVRLKMKGMDIRKDPGCSWI 513
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 90/356 (25%), Positives = 157/356 (44%), Gaps = 33/356 (9%)
Query: 62 THSHSPLPPLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVG-FQSHVYVNTALVNMYV 120
T + SP PPL S ++ +C T P QLHA+ K G Q + +
Sbjct: 11 TLNFSPQPPLILSKPFT----SCKT---PRDLKQLHAIFIKTGQIQDPLTAAEVIKFCAF 63
Query: 121 SLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEF---ARSLFEEMPCR-----NVV 172
S + + +F +MPE N WN ++ L + + A LF M C N
Sbjct: 64 SSRDIDYARAVFRQMPEPNCFCWNTILRILAETNDEHLQSEALMLFSAMLCDGRVKPNRF 123
Query: 173 SWTGIIDGYTRMNRSNEALALFRKMVACEYTEP----SEITILAVLPAIWQNGDVKSCQL 228
++ ++ R +R E + +V + E S + + V+ A+ ++ C+
Sbjct: 124 TFPSVLKACARASRLREGKQIHGLIVKFGFHEDEFVISNLVRMYVMCAVMEDAYSLFCKN 183
Query: 229 IHGYG-------EKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTS 281
+ + +KR ++ + N +ID + G I SA LF+++ +++VSW
Sbjct: 184 VVDFDGSCQMELDKRKQDG-NVVLWNIMIDGQVRLGDIKSAKNLFDEMP--PRSVVSWNV 240
Query: 282 IISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEEC 341
+ISG+A +G EA+ F MQ + PN VT +SVL A + G +E G + +
Sbjct: 241 MISGYAQNGHFIEAINLFQEMQSSNIDPNYVTLVSVLPAIARIGALELG-KWIHLYAGKN 299
Query: 342 EVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVE 397
+V D L+DM + G +++A + +P + + W ++GA + HG E
Sbjct: 300 KVEIDDVLGSALVDMYSKCGSIDKALQVFETLPKR--NAITWSAIIGAFAMHGRAE 353
>gi|225466196|ref|XP_002265420.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 537
Score = 291 bits (745), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 163/437 (37%), Positives = 252/437 (57%), Gaps = 13/437 (2%)
Query: 18 HSHLLTTNSLLHHSQLFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTY 77
H++LL + S ++NT+L ++ + P LYK Y S LP +++T+
Sbjct: 65 HAYLLFLSLPRRTSFIWNTMLRAFTDKKEPATVLSLYK-----YMLSTGFLP---NNYTF 116
Query: 78 SFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPE 137
SFL++ CA LS + G LHA ++G++++ +V L+++Y S + + +LFD
Sbjct: 117 SFLLQACAQLSDLSFGILLHAQAVRLGWEAYDFVQNGLLHLYASCNCMDSARRLFDGSVN 176
Query: 138 RNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKM 197
R++VTW +I G K G++ AR LF+EMP +N VSW+ +I GY ++ EAL LF M
Sbjct: 177 RDVVTWTAVINGYAKSGQVVVARQLFDEMPEKNAVSWSAMITGYAQIGLFREALELFNDM 236
Query: 198 VACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCG 257
+ P+ I+ L A G + + IH Y + R D + LID YAKCG
Sbjct: 237 QIAGF-RPNHGAIVGALTACAFLGALDQGRWIHAYVD-RNRMVLDRILGTALIDMYAKCG 294
Query: 258 CIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSV 317
C+ +A ++F+++ +++ ++TS+ISG A HG A+E F RMQ G+ PN VTF+ +
Sbjct: 295 CVETACRVFDEML--DRDVFAFTSLISGLANHGHSATAIEMFTRMQNEGVCPNEVTFICL 352
Query: 318 LNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEI 377
L+ACS GLVEEGL F M + P ++HYGCL+D+LGRAG LE A++ +P E
Sbjct: 353 LSACSRVGLVEEGLRIFKSMTNIYGIEPVVQHYGCLVDLLGRAGMLEDAKRVVREMPLE- 411
Query: 378 TDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLR 437
D V LL AC HG+VE+G+ + E +GG +VL+ N+ A ++ D ++R
Sbjct: 412 PDSYVLGALLNACRVHGDVELGKETVECLAERSLDHGGVHVLLSNMYASANQWEDVAKVR 471
Query: 438 RVMDERNAFKVPGCSLV 454
+ M+E+ KVPGCSL+
Sbjct: 472 KGMEEKKVKKVPGCSLI 488
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 101/429 (23%), Positives = 162/429 (37%), Gaps = 107/429 (24%)
Query: 80 LIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERN 139
L+ C T++H Q H +S F + G + + LF +P R
Sbjct: 19 LLDQCVTMAHIK-QIQSHLTVSGTLFDPFAAGRIISFCAVSAQGDISHAYLLFLSLPRRT 77
Query: 140 LVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVA 199
WN M+ +T L+L++ M++
Sbjct: 78 SFIWNTMLR-------------------------------AFTDKKEPATVLSLYKYMLS 106
Query: 200 CEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCI 259
+ P+ T +L A Q D+ L+H + G+ A+D V N L+ YA C C+
Sbjct: 107 TGFL-PNNYTFSFLLQACAQLSDLSFGILLHAQAVRLGWEAYDF-VQNGLLHLYASCNCM 164
Query: 260 FSASKLFEDISVER------------------------------KNLVSWTSIISGFAMH 289
SA +LF D SV R KN VSW+++I+G+A
Sbjct: 165 DSARRLF-DGSVNRDVVTWTAVINGYAKSGQVVVARQLFDEMPEKNAVSWSAMITGYAQI 223
Query: 290 GMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKH 349
G+ +EA+E F MQ G +PN + L AC+ G +++G + V+ ++ D
Sbjct: 224 GLFREALELFNDMQIAGFRPNHGAIVGALTACAFLGALDQG-RWIHAYVDRNRMVLDRIL 282
Query: 350 YGCLIDMLGRAGRLEQA--------EKTALGIPSEITDV--------------------- 380
LIDM + G +E A ++ S I+ +
Sbjct: 283 GTALIDMYAKCGCVETACRVFDEMLDRDVFAFTSLISGLANHGHSATAIEMFTRMQNEGV 342
Query: 381 ----VVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGD-----YVLMYNILAGVGRFG 431
V + LL ACS G VE G R+ + + + YG + Y + ++L G
Sbjct: 343 CPNEVTFICLLSACSRVGLVEEGLRIFKSMTNI---YGIEPVVQHYGCLVDLLGRAGMLE 399
Query: 432 DAERLRRVM 440
DA+R+ R M
Sbjct: 400 DAKRVVREM 408
>gi|413956916|gb|AFW89565.1| hypothetical protein ZEAMMB73_426720 [Zea mays]
Length = 537
Score = 291 bits (745), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 161/458 (35%), Positives = 257/458 (56%), Gaps = 45/458 (9%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHS----PLPPLFDSFTYSFLIRTCATLS 88
++NTL+ + +++P+ A +Y ++ + HS L P D T+ F++R CA +
Sbjct: 75 MYNTLIRGAAHSDAPRDAVSIYARMAR---HSADCDLMTLRP--DKRTFPFVLRACAAMG 129
Query: 89 HPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSS------------------- 129
G Q+HA + K G +S +V AL+ M+ +LG L ++
Sbjct: 130 AGETGAQVHAHVVKAGCESDAFVRNALIGMHATLGDLGAAAALFDGEAREDAVAWSAMIS 189
Query: 130 ------------KLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGI 177
+LFDE P ++LV+WNVMIT K G++ AR LF+ P R+VVSW +
Sbjct: 190 GFARRGDIGAARELFDESPVKDLVSWNVMITAYAKLGDMAPARELFDGAPDRDVVSWNAM 249
Query: 178 IDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRG 237
I GY R +A+ LF +M A +P +T+L++L A +GD+ + + +HG+ R
Sbjct: 250 ISGYVRCGSRKQAMELFEQMQAMG-EKPDTVTMLSLLSACADSGDLDAGRRLHGFLSGRF 308
Query: 238 FTAFDIRVL-NCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAV 296
L N LID YAKCG + SA ++F ++ KN+ +W SII G A+HG E++
Sbjct: 309 SRIGPTTALGNALIDMYAKCGSMTSALEVF--WLMQDKNVSTWNSIIGGLALHGHATESI 366
Query: 297 ENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDM 356
F +M + +KP+ +TF++VL ACSHGG+V++G +F M + + P+IKHYGC++DM
Sbjct: 367 AVFRKMLQGNVKPDEITFVAVLAACSHGGMVDKGHEYFSLMQQRYRIEPNIKHYGCMVDM 426
Query: 357 LGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGD 416
L R G L++A + +G + V+WRTLLGAC HG +E+ E R++L+ GD
Sbjct: 427 LSRGGLLKEAFEF-IGTMKIEPNPVIWRTLLGACRIHGEIELAEHANRELLKARSDASGD 485
Query: 417 YVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
+VL+ NI A VG + +E +R++MD+ K G +++
Sbjct: 486 FVLLSNIYASVGEWPGSENMRKLMDDSGVNKEAGRAVI 523
>gi|226508188|ref|NP_001146230.1| uncharacterized protein LOC100279802 [Zea mays]
gi|219886289|gb|ACL53519.1| unknown [Zea mays]
Length = 537
Score = 291 bits (744), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 161/458 (35%), Positives = 257/458 (56%), Gaps = 45/458 (9%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHS----PLPPLFDSFTYSFLIRTCATLS 88
++NTL+ + +++P+ A +Y ++ + HS L P D T+ F++R CA +
Sbjct: 75 MYNTLIRGAAHSDAPRDAVSIYARMAR---HSADCDLMTLRP--DKRTFPFVLRACAAMG 129
Query: 89 HPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSS------------------- 129
G Q+HA + K G +S +V AL+ M+ +LG L ++
Sbjct: 130 AGETGAQVHAHVVKAGCESDAFVRNALIGMHATLGDLGAAAALFDGEAREDAVAWSAMIS 189
Query: 130 ------------KLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGI 177
+LFDE P ++LV+WNVMIT K G++ AR LF+ P R+VVSW +
Sbjct: 190 GFARRGDIGAARELFDESPVKDLVSWNVMITAYAKLGDMAPARELFDGAPDRDVVSWNAM 249
Query: 178 IDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRG 237
I GY R +A+ LF +M A +P +T+L++L A +GD+ + + +HG+ R
Sbjct: 250 ISGYVRCGSRKQAMELFEQMQAMG-EKPDTVTMLSLLSACADSGDLDAGRRLHGFLSGRF 308
Query: 238 FTAFDIRVL-NCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAV 296
L N LID YAKCG + SA ++F ++ KN+ +W SII G A+HG E++
Sbjct: 309 SRIGPTTALGNALIDMYAKCGSMTSALEVF--WLMQDKNVSTWNSIIGGLALHGHATESI 366
Query: 297 ENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDM 356
F +M + +KP+ +TF++VL ACSHGG+V++G +F M + + P+IKHYGC++DM
Sbjct: 367 AVFRKMLQGNVKPDEITFVAVLAACSHGGMVDKGHEYFSLMQQRYRIEPNIKHYGCMVDM 426
Query: 357 LGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGD 416
L R G L++A + +G + V+WRTLLGAC HG +E+ E R++L+ GD
Sbjct: 427 LSRGGLLKEAFEF-IGTMKIEPNPVIWRTLLGACRIHGEIELAEHANRELLKARSDASGD 485
Query: 417 YVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
+VL+ NI A VG + +E +R++MD+ K G +++
Sbjct: 486 FVLLSNIYASVGEWPGSENMRKLMDDSGVNKEAGRAVI 523
>gi|359484390|ref|XP_002281719.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like [Vitis vinifera]
Length = 662
Score = 291 bits (744), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 162/424 (38%), Positives = 249/424 (58%), Gaps = 16/424 (3%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+N L+ Y + A +++++QQ S L P + T + C L LG
Sbjct: 201 WNVLISGYVKCRRYEDAVDVFRRMQQ-----QSSLRP--NEATVVSTLSACIALKMLELG 253
Query: 94 TQLHAVI-SKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVK 152
++H + ++GF + + ALV+MY G L + ++F++MP + ++ W M++G V
Sbjct: 254 KEIHRYVREQLGFT--IKIGNALVDMYCKCGHLSIAREIFNDMPIKTVICWTSMVSGYVN 311
Query: 153 WGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILA 212
G+L+ AR LFE P R+VV WT +I+GY + NR ++A+ALFR+M + P T++A
Sbjct: 312 CGQLDEARELFERSPVRDVVLWTAMINGYVQFNRFDDAVALFREM-QIKRVSPDRFTLVA 370
Query: 213 VLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVE 272
+L Q G ++ + IHGY ++ D V LI+ YAKCG I + ++F ++
Sbjct: 371 LLTGCAQLGTLEQGKWIHGYIDENKIM-IDAVVGTALIEMYAKCGFIEKSLEIFN--GLK 427
Query: 273 RKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLN 332
K+ SWTSII G AM+G +A+E F M + G+KP+ +TF+ VL+ACSHGGLVEEG
Sbjct: 428 EKDTASWTSIICGLAMNGKTSKALELFAEMVQTGVKPDDITFIGVLSACSHGGLVEEGRK 487
Query: 333 FFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVV--WRTLLGAC 390
F M ++ P ++HYGCLID+LGRAG+L++AE+ P+ +V+V + LL AC
Sbjct: 488 HFRSMTAVYQIEPKLEHYGCLIDLLGRAGQLDEAEELIEKSPNVNNEVIVPLYGALLSAC 547
Query: 391 SFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPG 450
HGNVEMGERV ++++ +E G + L+ NI A R+ D ++RR M + KVPG
Sbjct: 548 RTHGNVEMGERVAKRLVGIESGDSSVHTLLANIYASADRWEDVTKVRRKMKDLGVKKVPG 607
Query: 451 CSLV 454
CS V
Sbjct: 608 CSSV 611
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 111/443 (25%), Positives = 204/443 (46%), Gaps = 91/443 (20%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNL 92
++N ++ ++ S +KA LL++QL++ L P D+FTY F+ + L
Sbjct: 99 IYNLVIKAFTKNGSFRKAVLLFRQLRE------EGLSP--DNFTYPFVFKAIGCLGEVRE 150
Query: 93 GTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVK 152
G +++ + K G + YV +L++MY +G +++ ++F+EMP+R++V+WNV+I+G VK
Sbjct: 151 GEKVYGFVVKSGLEFDTYVCNSLMDMYAEVGRVQNLRQVFEEMPQRDVVSWNVLISGYVK 210
Query: 153 WGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILA 212
CR R +A+ +FR+M P+E T+++
Sbjct: 211 ---------------CR----------------RYEDAVDVFRRMQQQSSLRPNEATVVS 239
Query: 213 VLPAIWQNGDVKSCQLIHGY-GEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISV 271
L A ++ + IH Y E+ GFT I++ N L+D Y KCG + A ++F D+ +
Sbjct: 240 TLSACIALKMLELGKEIHRYVREQLGFT---IKIGNALVDMYCKCGHLSIAREIFNDMPI 296
Query: 272 ERKNLVSWTSIISGFAMHGMGKEAVENFGR------------------------------ 301
K ++ WTS++SG+ G EA E F R
Sbjct: 297 --KTVICWTSMVSGYVNCGQLDEARELFERSPVRDVVLWTAMINGYVQFNRFDDAVALFR 354
Query: 302 -MQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRA 360
MQ + P+R T +++L C+ G +E+G + ++E +++ D LI+M +
Sbjct: 355 EMQIKRVSPDRFTLVALLTGCAQLGTLEQG-KWIHGYIDENKIMIDAVVGTALIEMYAKC 413
Query: 361 GRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEM-----ERGYGG 415
G +E++ + G+ + D W +++ + +G T K LE+ + G
Sbjct: 414 GFIEKSLEIFNGLKEK--DTASWTSIICGLAMNGK-------TSKALELFAEMVQTGVKP 464
Query: 416 DYVLMYNILAGVGRFGDAERLRR 438
D + +L+ G E R+
Sbjct: 465 DDITFIGVLSACSHGGLVEEGRK 487
Score = 41.2 bits (95), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 60/135 (44%), Gaps = 9/135 (6%)
Query: 257 GCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLS 316
G + A ++F I + L + +I F +G ++AV F ++++ GL P+ T+
Sbjct: 80 GNLHYAERIFNYIDI--PGLFIYNLVIKAFTKNGSFRKAVLLFRQLREEGLSPDNFTYPF 137
Query: 317 VLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGC--LIDMLGRAGRLEQAEKTALGIP 374
V A G V EG + +V+ + Y C L+DM GR++ + +P
Sbjct: 138 VFKAIGCLGEVREGEKVYGFVVKSG---LEFDTYVCNSLMDMYAEVGRVQNLRQVFEEMP 194
Query: 375 SEITDVVVWRTLLGA 389
DVV W L+
Sbjct: 195 QR--DVVSWNVLISG 207
>gi|356567054|ref|XP_003551738.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g15300-like [Glycine max]
Length = 518
Score = 291 bits (744), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 169/454 (37%), Positives = 249/454 (54%), Gaps = 45/454 (9%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNL 92
++NT + S + P A LY Q+ Q S P D+FT+ F+++ C L N
Sbjct: 74 MWNTYIRGSSQSHDPVHAVALYAQMDQ---RSVKP-----DNFTFPFVLKACTKLFWVNT 125
Query: 93 GTQLHAVISKVGFQSHVYVN-------------------------------TALVNMYVS 121
G+ +H + ++GF S+V V +AL+ Y
Sbjct: 126 GSAVHGRVLRLGFGSNVVVRNTLLVFHAKCGDLKVATDIFDDSDKGDVVAWSALIAGYAQ 185
Query: 122 LGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGY 181
G L + KLFDEMP+R+LV+WNVMIT K GE+E AR LF+E P +++VSW +I GY
Sbjct: 186 RGDLSVARKLFDEMPKRDLVSWNVMITVYTKHGEMESARRLFDEAPMKDIVSWNALIGGY 245
Query: 182 TRMNRSNEALALFRKMVACEYTE-PSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTA 240
N + EAL LF +M C E P E+T+L++L A GD++S + +H +
Sbjct: 246 VLRNLNREALELFDEM--CGVGECPDEVTMLSLLSACADLGDLESGEKVHAKIIEMNKGK 303
Query: 241 FDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFG 300
+ N L+D YAKCG I A ++F + K++VSW S+ISG A HG +E++ F
Sbjct: 304 LSTLLGNALVDMYAKCGNIGKAVRVF--WLIRDKDVVSWNSVISGLAFHGHAEESLGLFR 361
Query: 301 RMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRA 360
M+ + P+ VTF+ VL ACSH G V+EG +F M + ++ P I+H GC++DMLGRA
Sbjct: 362 EMKMTKVCPDEVTFVGVLAACSHAGNVDEGNRYFHLMKNKYKIEPTIRHCGCVVDMLGRA 421
Query: 361 GRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLM 420
G L++A + E + +VWR+LLGAC HG+VE+ +R ++L M GDYVL+
Sbjct: 422 GLLKEAFNFIASMKIE-PNAIVWRSLLGACKVHGDVELAKRANEQLLRMRGDQSGDYVLL 480
Query: 421 YNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
N+ A G + AE +R++MD+ K G S V
Sbjct: 481 SNVYASQGEWDGAENVRKLMDDNGVTKNRGSSFV 514
>gi|296085795|emb|CBI31119.3| unnamed protein product [Vitis vinifera]
Length = 512
Score = 291 bits (744), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 163/437 (37%), Positives = 252/437 (57%), Gaps = 13/437 (2%)
Query: 18 HSHLLTTNSLLHHSQLFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTY 77
H++LL + S ++NT+L ++ + P LYK Y S LP +++T+
Sbjct: 40 HAYLLFLSLPRRTSFIWNTMLRAFTDKKEPATVLSLYK-----YMLSTGFLP---NNYTF 91
Query: 78 SFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPE 137
SFL++ CA LS + G LHA ++G++++ +V L+++Y S + + +LFD
Sbjct: 92 SFLLQACAQLSDLSFGILLHAQAVRLGWEAYDFVQNGLLHLYASCNCMDSARRLFDGSVN 151
Query: 138 RNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKM 197
R++VTW +I G K G++ AR LF+EMP +N VSW+ +I GY ++ EAL LF M
Sbjct: 152 RDVVTWTAVINGYAKSGQVVVARQLFDEMPEKNAVSWSAMITGYAQIGLFREALELFNDM 211
Query: 198 VACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCG 257
+ P+ I+ L A G + + IH Y + R D + LID YAKCG
Sbjct: 212 QIAGF-RPNHGAIVGALTACAFLGALDQGRWIHAYVD-RNRMVLDRILGTALIDMYAKCG 269
Query: 258 CIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSV 317
C+ +A ++F+++ +++ ++TS+ISG A HG A+E F RMQ G+ PN VTF+ +
Sbjct: 270 CVETACRVFDEML--DRDVFAFTSLISGLANHGHSATAIEMFTRMQNEGVCPNEVTFICL 327
Query: 318 LNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEI 377
L+ACS GLVEEGL F M + P ++HYGCL+D+LGRAG LE A++ +P E
Sbjct: 328 LSACSRVGLVEEGLRIFKSMTNIYGIEPVVQHYGCLVDLLGRAGMLEDAKRVVREMPLE- 386
Query: 378 TDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLR 437
D V LL AC HG+VE+G+ + E +GG +VL+ N+ A ++ D ++R
Sbjct: 387 PDSYVLGALLNACRVHGDVELGKETVECLAERSLDHGGVHVLLSNMYASANQWEDVAKVR 446
Query: 438 RVMDERNAFKVPGCSLV 454
+ M+E+ KVPGCSL+
Sbjct: 447 KGMEEKKVKKVPGCSLI 463
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 109/454 (24%), Positives = 168/454 (37%), Gaps = 143/454 (31%)
Query: 55 KQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTA 114
KQ+Q T S + LFD F +I CA +S G SH Y+
Sbjct: 5 KQIQSHLTVSGT----LFDPFAAGRIISFCA--------------VSAQGDISHAYL--- 43
Query: 115 LVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSW 174
LF +P R WN M+
Sbjct: 44 ----------------LFLSLPRRTSFIWNTMLR-------------------------- 61
Query: 175 TGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGE 234
+T L+L++ M++ + P+ T +L A Q D+ L+H
Sbjct: 62 -----AFTDKKEPATVLSLYKYMLSTGFL-PNNYTFSFLLQACAQLSDLSFGILLHAQAV 115
Query: 235 KRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVER--------------------- 273
+ G+ A+D V N L+ YA C C+ SA +LF D SV R
Sbjct: 116 RLGWEAYDF-VQNGLLHLYASCNCMDSARRLF-DGSVNRDVVTWTAVINGYAKSGQVVVA 173
Query: 274 ---------KNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHG 324
KN VSW+++I+G+A G+ +EA+E F MQ G +PN + L AC+
Sbjct: 174 RQLFDEMPEKNAVSWSAMITGYAQIGLFREALELFNDMQIAGFRPNHGAIVGALTACAFL 233
Query: 325 GLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQA--------EKTALGIPSE 376
G +++G + V+ ++ D LIDM + G +E A ++ S
Sbjct: 234 GALDQG-RWIHAYVDRNRMVLDRILGTALIDMYAKCGCVETACRVFDEMLDRDVFAFTSL 292
Query: 377 ITDV-------------------------VVWRTLLGACSFHGNVEMGERVTRKILEMER 411
I+ + V + LL ACS G VE G R+ + + +
Sbjct: 293 ISGLANHGHSATAIEMFTRMQNEGVCPNEVTFICLLSACSRVGLVEEGLRIFKSMTNI-- 350
Query: 412 GYGGD-----YVLMYNILAGVGRFGDAERLRRVM 440
YG + Y + ++L G DA+R+ R M
Sbjct: 351 -YGIEPVVQHYGCLVDLLGRAGMLEDAKRVVREM 383
>gi|296082950|emb|CBI22251.3| unnamed protein product [Vitis vinifera]
Length = 476
Score = 291 bits (744), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 165/428 (38%), Positives = 264/428 (61%), Gaps = 21/428 (4%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLI--RTCATLSHP 90
+NTL+ YS + SP ++ L+ Q+++ + + P D FT++FL+ R+ + P
Sbjct: 62 FYNTLIRGYSKSSSPSQSVQLFNQMRR------NCVDP--DGFTFTFLLKGRSRMRIDLP 113
Query: 91 NL--GTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMIT 148
+ ++H + K+GF H++V AL+++Y + G + ++F+EM ++V+W+ ++
Sbjct: 114 LIVASDEIHGAVLKLGFCFHLFVMNALIHLYAARGVPAAAHQVFNEMVGADVVSWSGLVV 173
Query: 149 GLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEI 208
V+ GELE AR +F EMP R+VVSWT ++ GY + RS EAL LFR+M P E+
Sbjct: 174 AHVRAGELELARQVFYEMPERDVVSWTVMVSGYAQAKRSREALELFREMRDVG-VRPDEV 232
Query: 209 TILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFED 268
+++V+ A GD+++ +H Y ++ GF + + + N LID YAKCGC+ A ++F +
Sbjct: 233 AMVSVISACTSLGDLETGFEVHRYIDENGF-GWMVSLCNALIDMYAKCGCMDLAWQVFNN 291
Query: 269 ISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVE 328
+ ERK+L++W S+IS A HG ++A F M G++P+ VTFL++L A +H G V+
Sbjct: 292 M--ERKSLITWNSMISACANHGNAEDAFRVFTLMLYSGIRPDGVTFLALLTAYTHKGWVD 349
Query: 329 EGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEK--TALGIPSEITDVVVWRTL 386
+G F+ M + V ++HYGC++DMLGRAGRLE+A K T++ +P + VVW L
Sbjct: 350 DGYGLFESMQRDYGVEAGVEHYGCMVDMLGRAGRLEEAYKLITSMSMP---CNDVVWGAL 406
Query: 387 LGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAF 446
L AC +G+VEMGERV +K++E++ GG Y+L+ +I GR +A LRR MD A
Sbjct: 407 LAACRIYGDVEMGERVLKKLIELKPDEGGYYILLRDIYVAAGRRAEAIELRRAMDVNGAK 466
Query: 447 KVPGCSLV 454
K GCS V
Sbjct: 467 KTLGCSWV 474
>gi|357127896|ref|XP_003565613.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g56310-like [Brachypodium distachyon]
Length = 500
Score = 291 bits (744), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 143/362 (39%), Positives = 225/362 (62%), Gaps = 4/362 (1%)
Query: 91 NLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGL 150
LG QLH+VI + G S +V+ +L+ Y S G + + +FD+ ++++ WNVMI+G
Sbjct: 86 TLGPQLHSVIVRAGLASDAHVSASLIQTYFSCGRVASARSVFDQTTDKDIFCWNVMISGY 145
Query: 151 VKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITI 210
VK G L AR LF+ MP RNVVSWT +I Y +M + EA+ +FR+M E EP + +
Sbjct: 146 VKSGNLACARELFDVMPARNVVSWTTVIGAYAQMKQPVEAVEVFRRMQVEEGIEPDGVAL 205
Query: 211 LAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDIS 270
L+VL A G V + +H + +RG + I ++N +ID Y K GC+ A ++FE
Sbjct: 206 LSVLSACGDLGAVDLGEWVHRFVVRRGL-CWQIPLMNAIIDMYVKLGCVRKAVEVFE--G 262
Query: 271 VERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEG 330
+++K++V+WT++I+GFA+HG+G EA+E F RM+ + PN VTFL++L+ACSH GL + G
Sbjct: 263 MDQKSVVTWTTVIAGFALHGLGLEAIEMFRRMEMENVAPNDVTFLAILSACSHVGLTDLG 322
Query: 331 LNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGAC 390
+F MV + + ++HYGC++D+LGRAG L +A+ +P + + +W LL A
Sbjct: 323 RWYFKIMVSQYRIKQRVEHYGCMVDLLGRAGYLMEAQDLVQDMPFK-ANAAIWGALLAAA 381
Query: 391 SFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPG 450
HG+ E+G++ ++E+E G+Y+L+ NI A R+ D +LR+ M +R VPG
Sbjct: 382 RTHGDAELGKQALLHLIELEPHNSGNYILLSNIYAEQERWDDVSKLRKQMKDRGLRNVPG 441
Query: 451 CS 452
S
Sbjct: 442 AS 443
>gi|449502858|ref|XP_004161763.1| PREDICTED: uncharacterized LOC101222622 [Cucumis sativus]
Length = 2355
Score = 290 bits (741), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 165/485 (34%), Positives = 263/485 (54%), Gaps = 41/485 (8%)
Query: 7 SQTPNNITTQIHSHLLTTNSLLHHSQLFNTLLHFYSL--AESPQKAFLLYKQLQQIYTHS 64
S PN I + + +L H +FN L F ++ + KAF + ++
Sbjct: 54 SIDPNIIAVKFIGVSSSHGNLRHSVLIFNHFLSFPNIFAYNALLKAFSQHNAWHTTISYF 113
Query: 65 HS----PLPPLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYV 120
++ P P D +T++ +++ CA L+ G ++H ++K G +S+++V +LV++Y
Sbjct: 114 NNQLVLPNAPNPDEYTFTSVLKACAGLAQVLEGQKVHCFVTKYGCESNLFVRNSLVDLYF 173
Query: 121 SLGFLKDSSKLFDEMPERNLVTWNVMITG---------------------LVKW------ 153
+G + KLFDEM R++V+WN +I+G LV W
Sbjct: 174 KVGCNCIAQKLFDEMVVRDVVSWNTLISGYCFSGMVDKARMVFDGMMEKNLVSWSTMISG 233
Query: 154 ----GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEIT 209
G LE AR LFE MP RNVVSW +I GY + + +A+ LFR+M P+++T
Sbjct: 234 YARVGNLEEARQLFENMPMRNVVSWNAMIAGYAQNEKYADAIELFRQMQHEGGLAPNDVT 293
Query: 210 ILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDI 269
+++VL A G + + IH + +R + + N L D YAKCGC+ A +F ++
Sbjct: 294 LVSVLSACAHLGALDLGKWIHRFI-RRNKIEVGLFLGNALADMYAKCGCVLEAKGVFHEM 352
Query: 270 SVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEE 329
++++SW+ II G AM+G EA F M + GL+PN ++F+ +L AC+H GLV++
Sbjct: 353 --HERDVISWSIIIMGLAMYGYANEAFNFFAEMIEDGLEPNDISFMGLLTACTHAGLVDK 410
Query: 330 GLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGA 389
GL +FD M + + P I+HYGC++D+L RAGRL+QAE +P + +V+VW LLG
Sbjct: 411 GLEYFDMMPQVYGITPKIEHYGCVVDLLSRAGRLDQAESLINSMPMQ-PNVIVWGALLGG 469
Query: 390 CSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVP 449
C + + E GERV +ILE++ + G V + N+ A +GR DA R M + + K P
Sbjct: 470 CRIYKDAERGERVVWRILELDSNHSGSLVYLANVYASMGRLDDAASCRLRMRDNKSMKTP 529
Query: 450 GCSLV 454
GCS +
Sbjct: 530 GCSWI 534
>gi|15235537|ref|NP_195454.1| Tetratricopeptide repeat (TPR)-like superfamily protein
[Arabidopsis thaliana]
gi|75213666|sp|Q9SZT8.1|PP354_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g37380, chloroplastic; Flags: Precursor
gi|4468804|emb|CAB38205.1| putative protein [Arabidopsis thaliana]
gi|7270720|emb|CAB80403.1| putative protein [Arabidopsis thaliana]
gi|332661386|gb|AEE86786.1| Tetratricopeptide repeat (TPR)-like superfamily protein
[Arabidopsis thaliana]
Length = 632
Score = 290 bits (741), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 159/423 (37%), Positives = 250/423 (59%), Gaps = 17/423 (4%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNL 92
LF ++ S+ +AFLLY QL S + P + FT+S L+++C+T S
Sbjct: 97 LFTAAINTASINGLKDQAFLLYVQLLS------SEINP--NEFTFSSLLKSCSTKS---- 144
Query: 93 GTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVK 152
G +H + K G YV T LV++Y G + + K+FD MPER+LV+ MIT K
Sbjct: 145 GKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAK 204
Query: 153 WGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILA 212
G +E AR+LF+ M R++VSW +IDGY + N+AL LF+K++A +P EIT++A
Sbjct: 205 QGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVA 264
Query: 213 VLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVE 272
L A Q G +++ + IH + K +++V LID Y+KCG + A +F D
Sbjct: 265 ALSACSQIGALETGRWIHVF-VKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFND--TP 321
Query: 273 RKNLVSWTSIISGFAMHGMGKEAVENFGRMQKV-GLKPNRVTFLSVLNACSHGGLVEEGL 331
RK++V+W ++I+G+AMHG ++A+ F MQ + GL+P +TF+ L AC+H GLV EG+
Sbjct: 322 RKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGI 381
Query: 332 NFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACS 391
F+ M +E + P I+HYGCL+ +LGRAG+L++A +T + + D V+W ++LG+C
Sbjct: 382 RIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMD-ADSVLWSSVLGSCK 440
Query: 392 FHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGC 451
HG+ +G+ + ++ + G YVL+ NI A VG + ++R +M E+ K PG
Sbjct: 441 LHGDFVLGKEIAEYLIGLNIKNSGIYVLLSNIYASVGDYEGVAKVRNLMKEKGIVKEPGI 500
Query: 452 SLV 454
S +
Sbjct: 501 STI 503
>gi|449447637|ref|XP_004141574.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g15300-like [Cucumis sativus]
Length = 542
Score = 289 bits (740), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 164/453 (36%), Positives = 251/453 (55%), Gaps = 43/453 (9%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNL 92
++NT++ + P A LY Q++ + + P D FT+SF+++ C LS L
Sbjct: 80 MWNTMIRGSAQTLKPATAVSLYTQME------NRGVRP--DKFTFSFVLKACTKLSWVKL 131
Query: 93 GTQLHAVISKVGFQSHVYVN-------------------------------TALVNMYVS 121
G +H + K GFQS+ +V +AL Y
Sbjct: 132 GFGIHGKVLKSGFQSNTFVRNTLIYFHANCGDLATARALFDASAKREVVPWSALTAGYAR 191
Query: 122 LGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGY 181
G L + +LFDEMP ++LV+WNVMIT K GE+E AR LF+E+P ++VV+W +I GY
Sbjct: 192 RGKLDVARQLFDEMPMKDLVSWNVMITAYAKHGEMEKARKLFDEVPKKDVVTWNAMIAGY 251
Query: 182 TRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAF 241
+ EAL +F M P ++T+L++L A GD++ + IH
Sbjct: 252 VLSRLNKEALEMFDAMRDLG-QRPDDVTMLSILSASADLGDLEIGKKIHRSIFDMCCGDL 310
Query: 242 DIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGR 301
+ + N LID YAKCG I +A ++F+ + +K+ SW SII G A+HG +E++ F
Sbjct: 311 SVLLSNALIDMYAKCGSIGNALEVFQ--GMRKKDTSSWNSIIGGLALHGHAEESINLFQE 368
Query: 302 MQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAG 361
M ++ +KPN +TF++VL ACSH G V EG +F+ M ++ P+IKHYGC++D+LGRAG
Sbjct: 369 MLRLKMKPNEITFVAVLVACSHAGKVREGRMYFNLMKNVFKIEPNIKHYGCMVDILGRAG 428
Query: 362 RLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMY 421
L +A + E + ++WRTLLGAC HG+VE+G R ++L+M + GDYVL+
Sbjct: 429 LLIEAFDFIDTMEIE-PNAIIWRTLLGACRVHGDVELGRRANEQLLKMRKDESGDYVLLS 487
Query: 422 NILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
NI A G + +++R++MD+ K G SL+
Sbjct: 488 NIYASQGEWDGVQKVRKLMDDGGVKKKVGHSLI 520
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 90/371 (24%), Positives = 167/371 (45%), Gaps = 40/371 (10%)
Query: 72 FDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTAL--VNMYVSLGFLKDSS 129
F+ F S L + C QLHA + G S V L V+ V G + +
Sbjct: 11 FNRFQQSSLWQKCTNFRSLK---QLHAFLIVNGLNSTTSVLRELIFVSAIVVSGTMDYAH 67
Query: 130 KLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNV----VSWTGIIDGYTRMN 185
+LF ++ + ++ WN MI G + + A SL+ +M R V +++ ++ T+++
Sbjct: 68 QLFAQISQPDIFMWNTMIRGSAQTLKPATAVSLYTQMENRGVRPDKFTFSFVLKACTKLS 127
Query: 186 RSNEALALFRKMVACEYTEPSEI---------------TILAVLPAIWQNGDVKSCQLIH 230
+ K++ + + + T A+ A + V L
Sbjct: 128 WVKLGFGIHGKVLKSGFQSNTFVRNTLIYFHANCGDLATARALFDASAKREVVPWSALTA 187
Query: 231 GYGEKRG--------FTAFDIRVL---NCLIDTYAKCGCIFSASKLFEDISVERKNLVSW 279
GY +RG F ++ L N +I YAK G + A KLF++ V +K++V+W
Sbjct: 188 GYA-RRGKLDVARQLFDEMPMKDLVSWNVMITAYAKHGEMEKARKLFDE--VPKKDVVTW 244
Query: 280 TSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVE 339
++I+G+ + + KEA+E F M+ +G +P+ VT LS+L+A + G +E G + +
Sbjct: 245 NAMIAGYVLSRLNKEALEMFDAMRDLGQRPDDVTMLSILSASADLGDLEIGKKIHRSIFD 304
Query: 340 ECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMG 399
C + LIDM + G + A + G+ + D W +++G + HG+ E
Sbjct: 305 MCCGDLSVLLSNALIDMYAKCGSIGNALEVFQGMRKK--DTSSWNSIIGGLALHGHAEES 362
Query: 400 ERVTRKILEME 410
+ +++L ++
Sbjct: 363 INLFQEMLRLK 373
>gi|356536721|ref|XP_003536884.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g62890-like [Glycine max]
Length = 1116
Score = 289 bits (739), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 155/392 (39%), Positives = 238/392 (60%), Gaps = 11/392 (2%)
Query: 65 HSPLPPLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGF 124
H+ LP D T+ FL+++ T P+ G QLHA I +G + +V T+L+NMY S G
Sbjct: 57 HAVLP---DLHTFPFLLQSINT---PHRGRQLHAQILLLGLANDPFVQTSLINMYSSCGT 110
Query: 125 LKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRM 184
+ + FDE+ + +L +WN +I K G + AR LF++MP +NV+SW+ +I GY
Sbjct: 111 PTFARQAFDEITQPDLPSWNAIIHANAKAGMIHIARKLFDQMPEKNVISWSCMIHGYVSC 170
Query: 185 NRSNEALALFRKMVACEYTE--PSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFD 242
AL+LFR + E ++ P+E T+ +VL A + G ++ + +H Y +K G D
Sbjct: 171 GEYKAALSLFRSLQTLEGSQLRPNEFTMSSVLSACARLGALQHGKWVHAYIDKTGMK-ID 229
Query: 243 IRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRM 302
+ + LID YAKCG I A +F+++ E K++++W+++I+ F+MHG+ +E +E F RM
Sbjct: 230 VVLGTSLIDMYAKCGSIERAKCIFDNLGPE-KDVMAWSAMITAFSMHGLSEECLELFARM 288
Query: 303 QKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGR 362
G++PN VTF++VL AC HGGLV EG +F +M+ E V P I+HYGC++D+ RAGR
Sbjct: 289 VNDGVRPNAVTFVAVLCACVHGGLVSEGNEYFKRMMNEYGVSPMIQHYGCMVDLYSRAGR 348
Query: 363 LEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYN 422
+E A +P E DV++W LL HG+VE E K+LE++ YVL+ N
Sbjct: 349 IEDAWNVVKSMPME-PDVMIWGALLNGARIHGDVETCEIAITKLLELDPANSSAYVLLSN 407
Query: 423 ILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
+ A +GR+ + LR +M+ R K+PGCSLV
Sbjct: 408 VYAKLGRWREVRHLRDLMEVRGIKKLPGCSLV 439
>gi|449437256|ref|XP_004136408.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 632
Score = 289 bits (739), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 156/454 (34%), Positives = 260/454 (57%), Gaps = 10/454 (2%)
Query: 7 SQTPNNITTQIHSHLLTTNSLLHHSQLFNTLLHFYSL--AESPQKAFLLYKQLQQIYTHS 64
S PN I + + +L H +FN L F ++ + KAF + ++
Sbjct: 54 SIDPNIIAVKFIGVSSSHGNLRHSVLIFNHFLSFPNIFAYNALLKAFSQHNAWHTTISYF 113
Query: 65 HS----PLPPLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYV 120
++ P P D +T++ +++ CA L+ G ++H ++K G +S+++V +LV++Y
Sbjct: 114 NNQLVLPNAPNPDEYTFTSVLKACAGLAQVLEGQKVHCFVTKYGCESNLFVRNSLVDLYF 173
Query: 121 SLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDG 180
+G + KLFDEM R++V+WN +I+G G ++ AR +F+ M +N+VSW+ +I G
Sbjct: 174 KVGCNCIAQKLFDEMVVRDVVSWNTLISGYCFSGMVDKARMVFDGMMEKNLVSWSTMISG 233
Query: 181 YTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTA 240
Y R + +A+ LFR+M P+++T+++VL A G + + IH + +R
Sbjct: 234 YARNEKYADAIELFRQMQHEGGLAPNDVTLVSVLSACAHLGALDLGKWIHRF-IRRNKIE 292
Query: 241 FDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFG 300
+ + N L D YAKCGC+ A +F ++ ++++SW+ II G AM+G EA F
Sbjct: 293 VGLFLGNALADMYAKCGCVLEAKGVFHEM--HERDVISWSIIIMGLAMYGYANEAFNFFA 350
Query: 301 RMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRA 360
M + GL+PN ++F+ +L AC+H GLV++GL +FD M + + P I+HYGC++D+L RA
Sbjct: 351 EMIEDGLEPNDISFMGLLTACTHAGLVDKGLEYFDMMPQVYGITPKIEHYGCVVDLLSRA 410
Query: 361 GRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLM 420
GRL+QAE +P + +V+VW LLG C + + E GERV +ILE++ + G V +
Sbjct: 411 GRLDQAESLINSMPMQ-PNVIVWGALLGGCRIYKDAERGERVVWRILELDSNHSGSLVYL 469
Query: 421 YNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
N+ A +GR DA R M + + K PGCS +
Sbjct: 470 ANVYASMGRLDDAASCRLRMRDNKSMKTPGCSWI 503
>gi|242036805|ref|XP_002465797.1| hypothetical protein SORBIDRAFT_01g045970 [Sorghum bicolor]
gi|241919651|gb|EER92795.1| hypothetical protein SORBIDRAFT_01g045970 [Sorghum bicolor]
Length = 531
Score = 289 bits (739), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 159/454 (35%), Positives = 257/454 (56%), Gaps = 38/454 (8%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNL 92
++NTL+ + + +P+ A +Y ++ + + P D T+ F++R CA +
Sbjct: 75 MYNTLIRGAAHSYAPRDAVSIYARMARHSAGCGGGVRP--DKRTFPFVLRACAAMGASET 132
Query: 93 GTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSS----------------------- 129
G Q+HA + K G +S +V AL+ M+ + G L ++
Sbjct: 133 GAQVHAHVVKAGCESDAFVRNALIGMHATCGDLGAAAALFDGEAREDAVAWSAMISGFAR 192
Query: 130 --------KLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGY 181
+LFDE P ++LV+WNVMIT K G++ AR LF+ P R+VVSW +I GY
Sbjct: 193 RGDIGAARELFDESPVKDLVSWNVMITAYAKLGDMAPARELFDGAPDRDVVSWNAMISGY 252
Query: 182 TRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAF 241
R +A+ LF +M A +P +T+L++L A +GD+ + + +H + R
Sbjct: 253 VRCGSHKQAMELFEQMQAMG-EKPDTVTMLSLLSACADSGDMDAGRRLHRFLSGRFSRIG 311
Query: 242 DIRVL-NCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFG 300
VL N LID YAKCG + SA ++F ++ KN+ +W SII G A+HG EA++ F
Sbjct: 312 PSTVLGNALIDMYAKCGSMTSALEVF--WLMQDKNVSTWNSIIGGLALHGHVTEAIDVFQ 369
Query: 301 RMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRA 360
+M + +KP+ +TF++VL ACSHGG+V++G +F+ M + + P++KHYGC++DML RA
Sbjct: 370 KMLQGNVKPDEITFVAVLVACSHGGMVDKGHEYFNLMQQRYMIEPNVKHYGCMVDMLSRA 429
Query: 361 GRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLM 420
G L++A + +G + V+WRTLLGAC HG +E+ E +++L+ GD+VL+
Sbjct: 430 GLLKEAFEF-IGTMKIEPNPVIWRTLLGACRIHGELELAEHANQELLKARSDASGDFVLL 488
Query: 421 YNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
NI A VG + +E +R++MD+ K GC++V
Sbjct: 489 SNIYASVGEWLGSENMRKLMDDSGVNKEAGCAVV 522
>gi|356570919|ref|XP_003553630.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g06540-like [Glycine max]
Length = 622
Score = 288 bits (737), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 159/443 (35%), Positives = 251/443 (56%), Gaps = 15/443 (3%)
Query: 14 TTQIHSHLLTTNSLLHHSQLF--NTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPL 71
TT + + + S + + LF N L+ S +E+P+ +F Y I LP
Sbjct: 63 TTNLLHYAIRVASQIQNPNLFIYNALIRGCSTSENPENSFHYY-----IKALRFGLLP-- 115
Query: 72 FDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKL 131
D+ T+ FL++ CA L + +G Q H K GF+ YV +LV+MY S+G + + +
Sbjct: 116 -DNITHPFLVKACAQLENAPMGMQTHGQAIKHGFEQDFYVQNSLVHMYASVGDINAARSV 174
Query: 132 FDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEAL 191
F M ++V+W MI G + G+ + AR LF+ MP RN+V+W+ +I GY R N +A+
Sbjct: 175 FQRMCRFDVVSWTCMIAGYHRCGDAKSARELFDRMPERNLVTWSTMISGYARNNCFEKAV 234
Query: 192 ALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLID 251
F + A E +E ++ V+ + G + + H Y R + ++ + ++D
Sbjct: 235 ETFEALQA-EGVVANETVMVGVISSCAHLGALAMGEKAHEY-VMRNKLSLNLILGTAVVD 292
Query: 252 TYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNR 311
YA+CG + A +FE + K+++ WT++I+G AMHG ++A+ F M K G P
Sbjct: 293 MYARCGNVEKAVMVFEQLP--EKDVLCWTALIAGLAMHGYAEKALWYFSEMAKKGFVPRD 350
Query: 312 VTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTAL 371
+TF +VL ACSH G+VE GL F+ M + V P ++HYGC++D+LGRAG+L +AEK L
Sbjct: 351 ITFTAVLTACSHAGMVERGLEIFESMKRDHGVEPRLEHYGCMVDLLGRAGKLRKAEKFVL 410
Query: 372 GIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFG 431
+P + + +WR LLGAC H NVE+GERV + +LEM+ Y G YVL+ NI A ++
Sbjct: 411 KMPVK-PNAPIWRALLGACRIHKNVEVGERVGKILLEMQPEYSGHYVLLSNIYARANKWK 469
Query: 432 DAERLRRVMDERNAFKVPGCSLV 454
D +R++M ++ K PG SL+
Sbjct: 470 DVTVMRQMMKDKGVRKPPGYSLI 492
>gi|449448280|ref|XP_004141894.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Cucumis sativus]
gi|449513125|ref|XP_004164238.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Cucumis sativus]
Length = 645
Score = 288 bits (737), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 162/424 (38%), Positives = 252/424 (59%), Gaps = 23/424 (5%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
F+ ++H + + +AF Y Q+ + P ++FT+S ++++C+ S G
Sbjct: 113 FSAIIHSHVQSRLFDRAFGYYSQMLSC------GVEP--NAFTFSSVLKSCSLES----G 160
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
LH K+G S +YV T LV++Y G + + +LFD+MPER+LV+ M+T K
Sbjct: 161 KVLHCQAIKLGLGSDLYVRTGLVDVYARGGDVVCARQLFDKMPERSLVSLTTMLTCYSKM 220
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
GEL+ ARSLFE M R+VV W +I GY + NE+L LFR+M+ + P+E+T+LAV
Sbjct: 221 GELDKARSLFEGMKERDVVCWNVMIGGYAQSGVPNESLKLFRRMLVAKAI-PNEVTVLAV 279
Query: 214 LPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVER 273
L A Q G ++S + IH Y E +G ++ V LID Y+KCG + A +F+ I
Sbjct: 280 LSACGQLGALESGRWIHSYIENKGIQ-INVHVGTALIDMYSKCGSLEDARLVFDRI--RD 336
Query: 274 KNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNF 333
K++V+W S+I G+AMHG + A++ F M + G KP +TF+ +L+AC HGGLVEEG +F
Sbjct: 337 KDVVAWNSMIVGYAMHGFSQHALQLFEEMTETGHKPTDITFIGILSACGHGGLVEEGRSF 396
Query: 334 FDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEIT---DVVVWRTLLGAC 390
F M ++ + P I+HYGC++++LGRAG LE+ A G+ +T D V+W TLLG C
Sbjct: 397 FRLMRDKYGIEPKIEHYGCMVNLLGRAGHLEE----AYGLVKNMTIAADPVLWGTLLGCC 452
Query: 391 SFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPG 450
H N+++GE + + +++ + G YVL+ N+ A G + ++R +M E K G
Sbjct: 453 RLHVNIKLGEEIAKFLVDQKLANSGTYVLLSNMYAATGNWEGVAKMRTLMKEHGIEKEHG 512
Query: 451 CSLV 454
CS +
Sbjct: 513 CSSI 516
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 102/439 (23%), Positives = 175/439 (39%), Gaps = 101/439 (23%)
Query: 60 IYTHSHSPLPPLF------------------DSFT----YSFLIRTCATLSHPNLGTQLH 97
I+T SH P +F D F ++ LI +++H Q+H
Sbjct: 11 IFTASHPSPPSIFTTNRSSVLPSSSSTARTSDRFQEVERFASLIDKSKSVAHL---LQIH 67
Query: 98 AVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELE 157
A + + G + +N L Y +LG L S +F+ E
Sbjct: 68 ASLLRRGLYHNPILNFKLQRSYAALGRLDCSVFVFNTFDE-------------------- 107
Query: 158 FARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAI 217
NV S++ II + + + A + +M++C EP+ T +VL +
Sbjct: 108 -----------PNVFSFSAIIHSHVQSRLFDRAFGYYSQMLSCG-VEPNAFTFSSVLKSC 155
Query: 218 -WQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDI------- 269
++G V CQ I K G + D+ V L+D YA+ G + A +LF+ +
Sbjct: 156 SLESGKVLHCQAI-----KLGLGS-DLYVRTGLVDVYARGGDVVCARQLFDKMPERSLVS 209
Query: 270 ----------------------SVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGL 307
++ +++V W +I G+A G+ E+++ F RM
Sbjct: 210 LTTMLTCYSKMGELDKARSLFEGMKERDVVCWNVMIGGYAQSGVPNESLKLFRRMLVAKA 269
Query: 308 KPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAE 367
PN VT L+VL+AC G +E G + +E + ++ LIDM + G LE A
Sbjct: 270 IPNEVTVLAVLSACGQLGALESG-RWIHSYIENKGIQINVHVGTALIDMYSKCGSLEDAR 328
Query: 368 KTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGV 427
I + DVV W +++ + HG + ++ ++ E G+ + IL+
Sbjct: 329 LVFDRIRDK--DVVAWNSMIVGYAMHGFSQHALQLFEEMTET--GHKPTDITFIGILSAC 384
Query: 428 GRFGDAERLR---RVMDER 443
G G E R R+M ++
Sbjct: 385 GHGGLVEEGRSFFRLMRDK 403
>gi|225434183|ref|XP_002275535.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Vitis vinifera]
Length = 513
Score = 288 bits (736), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 142/388 (36%), Positives = 232/388 (59%), Gaps = 4/388 (1%)
Query: 67 PLPPLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLK 126
P P + + Y+ LI+ CA L G ++HAV+ K G +++++ T+LV+MY
Sbjct: 106 PSAPNPNEYIYTSLIKACAGLEAIADGLKVHAVVIKSGLDNNIHLGTSLVDMYFKFREPA 165
Query: 127 DSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNR 186
+ ++FDEMP R++V+WN M++G G+LE AR +F++M R+V+SW +I GY + +
Sbjct: 166 SAGQVFDEMPLRDVVSWNTMVSGYCLCGDLESARRVFDQMLERDVISWNAMIGGYVQNGK 225
Query: 187 SNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVL 246
++A+ +F +M P ++T+++VL A G + + I + RG ++ +
Sbjct: 226 YSDAIEVFHEMQKVGGVVPDDVTLVSVLSACAHVGALDFGRWIDRFVGWRG-RGLNLYLG 284
Query: 247 NCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVG 306
N LID YAKCG + A ++F+ + ++++SW+++I G HG EA + +M + G
Sbjct: 285 NALIDMYAKCGTMEEARRIFD--GMRERDVISWSTMICGSGTHGDADEAFGYYSKMLECG 342
Query: 307 LKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQA 366
+KPN VTF+ +L+ACSH GLV++G+ F +M++E ++P + HYGC+ID+L RAGRL++A
Sbjct: 343 VKPNEVTFMGLLSACSHAGLVDKGIELFSRMIQEYRIVPKVGHYGCVIDLLSRAGRLDEA 402
Query: 367 EKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAG 426
E +P E +V+VW LLG C H + GERV + +LE++ Y G YV + A
Sbjct: 403 EDLINSMPIE-PNVIVWGALLGGCRIHKDFRRGERVAQHLLELDSEYTGSYVYIAGAKAS 461
Query: 427 VGRFGDAERLRRVMDERNAFKVPGCSLV 454
VGR DA M + K PGCS +
Sbjct: 462 VGRVDDAANCWLRMQHKGIIKDPGCSKI 489
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 89/345 (25%), Positives = 153/345 (44%), Gaps = 44/345 (12%)
Query: 102 KVGFQSHVYVNTALVNM---YVSLGFLKDSSKLFDEMP---ERNLVTWNVMITGLVKWGE 155
K+ +H+ + T L+N + + L+ ++L P NL+ +I
Sbjct: 2 KLQSHNHLKLTTLLLNYAEHFQTKQLLQIQAQLITNPPLSLHPNLIAVK-LIGACAANAN 60
Query: 156 LEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVAC-------EYTEPSEI 208
L A+ +F ++P NV SW II + AL F + ++ EY S I
Sbjct: 61 LYHAQLIFAQLPNPNVFSWNAIIKAHINCGAWEHALNCFNRQLSLPSAPNPNEYIYTSLI 120
Query: 209 TILAVLPAIWQNGDVKSC--------------QLIHGYGEKRGFTAF----------DIR 244
A L AI V + L+ Y + R + D+
Sbjct: 121 KACAGLEAIADGLKVHAVVIKSGLDNNIHLGTSLVDMYFKFREPASAGQVFDEMPLRDVV 180
Query: 245 VLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQK 304
N ++ Y CG + SA ++F+ + +ER +++SW ++I G+ +G +A+E F MQK
Sbjct: 181 SWNTMVSGYCLCGDLESARRVFDQM-LER-DVISWNAMIGGYVQNGKYSDAIEVFHEMQK 238
Query: 305 V-GLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRL 363
V G+ P+ VT +SVL+AC+H G ++ G + D+ V ++ LIDM + G +
Sbjct: 239 VGGVVPDDVTLVSVLSACAHVGALDFG-RWIDRFVGWRGRGLNLYLGNALIDMYAKCGTM 297
Query: 364 EQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILE 408
E+A + G+ DV+ W T++ HG+ + K+LE
Sbjct: 298 EEARRIFDGMRER--DVISWSTMICGSGTHGDADEAFGYYSKMLE 340
>gi|449525261|ref|XP_004169636.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Cucumis sativus]
Length = 650
Score = 288 bits (736), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 151/381 (39%), Positives = 232/381 (60%), Gaps = 6/381 (1%)
Query: 74 SFTYSFLIRTCATLSHPNLGTQLHA-VISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLF 132
SFT+S L + C + +LG Q+HA I GF S +YV +++++YV GFL + K+F
Sbjct: 142 SFTFSALFKACGAALNMDLGKQVHAQTILIGGFASDLYVGNSMIDLYVKCGFLGCARKVF 201
Query: 133 DEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALA 192
DEM ER++V+W +I K+G++E A LF+++P +++V+WT ++ GY + R EAL
Sbjct: 202 DEMSERDVVSWTELIVAYAKYGDMESASGLFDDLPSKDMVAWTAMVTGYAQNGRPKEALE 261
Query: 193 LFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGF-TAFDIRVLNCLID 251
F+KM E E+T+ V+ A Q G VK I E+ GF + ++ V + LID
Sbjct: 262 YFQKMQDVG-METDEVTLAGVISACAQLGAVKHANWIRDIAERSGFGPSGNVVVGSALID 320
Query: 252 TYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNR 311
Y+KCG A K+FE ++ +N+ S++S+I G+AMHG A++ F M K ++PN+
Sbjct: 321 MYSKCGSPDEAYKVFE--VMKERNVFSYSSMILGYAMHGRAHSALQLFHDMLKTEIRPNK 378
Query: 312 VTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTAL 371
VTF+ +L+ACSH GLVE+G F KM + V P HY C++D+LGRAG LE+A
Sbjct: 379 VTFIGILSACSHAGLVEQGRQLFAKMEKFFGVAPSPDHYACMVDLLGRAGCLEEALDLVK 438
Query: 372 GIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFG 431
+P E + VW LLGAC HGN ++ + ++ ++E G+Y+L+ NI A GR+
Sbjct: 439 TMPME-PNGGVWGALLGACRIHGNPDIAQIAANELFKLEPNGIGNYILLSNIYASAGRWE 497
Query: 432 DAERLRRVMDERNAFKVPGCS 452
+ +LR+V+ E+ K PGCS
Sbjct: 498 EVSKLRKVIREKGFKKNPGCS 518
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 102/417 (24%), Positives = 161/417 (38%), Gaps = 107/417 (25%)
Query: 95 QLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKL--FDEMPERNLVTWNVMITGLVK 152
Q+HA I + G YV T L+ M + S L F ++ N W MI G
Sbjct: 60 QVHAHIIRNGLSQCSYVLTKLIRMLTKVDVPMGSYPLLVFGQVNYPNPFLWTAMIRGYAL 119
Query: 153 WGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILA 212
G L + + YTRM R P T A
Sbjct: 120 QGLLSESTNF------------------YTRMRRDG--------------VGPVSFTFSA 147
Query: 213 VLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDIS-- 270
+ A ++ + +H G A D+ V N +ID Y KCG + A K+F+++S
Sbjct: 148 LFKACGAALNMDLGKQVHAQTILIGGFASDLYVGNSMIDLYVKCGFLGCARKVFDEMSER 207
Query: 271 ---------------------------VERKNLVSWTSIISGFAMHGMGKEAVENFGRMQ 303
+ K++V+WT++++G+A +G KEA+E F +MQ
Sbjct: 208 DVVSWTELIVAYAKYGDMESASGLFDDLPSKDMVAWTAMVTGYAQNGRPKEALEYFQKMQ 267
Query: 304 KVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLP--DIKHYGCLIDMLGRAG 361
VG++ + VT V++AC+ G V+ N+ + E P ++ LIDM + G
Sbjct: 268 DVGMETDEVTLAGVISACAQLGAVKHA-NWIRDIAERSGFGPSGNVVVGSALIDMYSKCG 326
Query: 362 RLEQAEKT---------------ALG-----------------IPSEI-TDVVVWRTLLG 388
++A K LG + +EI + V + +L
Sbjct: 327 SPDEAYKVFEVMKERNVFSYSSMILGYAMHGRAHSALQLFHDMLKTEIRPNKVTFIGILS 386
Query: 389 ACSFHGNVEMGERVTRKILEMERGYG-----GDYVLMYNILAGVGRFGDAERLRRVM 440
ACS G VE G ++ K ME+ +G Y M ++L G +A L + M
Sbjct: 387 ACSHAGLVEQGRQLFAK---MEKFFGVAPSPDHYACMVDLLGRAGCLEEALDLVKTM 440
>gi|222631730|gb|EEE63862.1| hypothetical protein OsJ_18686 [Oryza sativa Japonica Group]
Length = 551
Score = 288 bits (736), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 158/466 (33%), Positives = 261/466 (56%), Gaps = 22/466 (4%)
Query: 1 MHILQNSQTPNNITTQIHSHLLTTNSLLHHSQ-------LFNTLLHFYSLAESPQKAFLL 53
+ I Q+S I ++H T++ +Q L N ++ Y+ + A +
Sbjct: 40 LRISQSSYLATQIVHLCNAHRRVTHAARVFAQVRDPNLHLHNAMIKAYAQNHQHRDAVAV 99
Query: 54 YKQLQQIYTHSHSPLPPLF----DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHV 109
Y ++ + T PP D FTY FL++ C + LG Q+H + + G S
Sbjct: 100 YIRMLRCPTS-----PPDGHAGGDRFTYPFLLKACGGTAALELGKQVHTHVVRSGCDSSA 154
Query: 110 YVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCR 169
V +L+ MY G L + K+FDEM ER++V+WN++I+ + G++ A +LF MP +
Sbjct: 155 IVQNSLIEMYTRAGDLALAHKVFDEMRERDVVSWNMLISAHARLGQMRKATALFNSMPDK 214
Query: 170 NVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLI 229
+V+WT ++ GYT + A+ FR M E EP +++I+AVLPA Q G ++ + I
Sbjct: 215 TIVTWTAMVSGYTTVGDYPGAVDAFRSM-QTEGFEPDDVSIVAVLPACAQLGTLELGRWI 273
Query: 230 HGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMH 289
+ Y ++ G + N L++ YAKCGCI A +LF+ ++ K+++SW+++I G A H
Sbjct: 274 YAYCKRHGMLT-STHICNALMEMYAKCGCIDQALQLFDGMA--DKDVISWSTVIGGLAAH 330
Query: 290 GMGKEAVENFGRMQKVG-LKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIK 348
G EAV F M+K G ++PN +TF+ +L+ACS+ GLV+EGL+ FD+M + V P ++
Sbjct: 331 GRAHEAVWLFTEMEKEGKVRPNVITFVGLLSACSYAGLVDEGLSHFDRMNDVYGVEPGVE 390
Query: 349 HYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILE 408
HYGC++D+LGR+G++ +A +P D VW +LL AC HG+V+ +++E
Sbjct: 391 HYGCVVDLLGRSGQIRRALDLVRDMPVP-ADAKVWGSLLSACRSHGDVDTAVLAAERLVE 449
Query: 409 MERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
+E G+ V++ N+ A R+ D R+ + R+ K PGCSL+
Sbjct: 450 LEPDDVGNLVMLANVYAAARRWSDVASTRKAIRSRSMRKTPGCSLI 495
>gi|125552488|gb|EAY98197.1| hypothetical protein OsI_20110 [Oryza sativa Indica Group]
Length = 551
Score = 287 bits (735), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 158/466 (33%), Positives = 261/466 (56%), Gaps = 22/466 (4%)
Query: 1 MHILQNSQTPNNITTQIHSHLLTTNSLLHHSQ-------LFNTLLHFYSLAESPQKAFLL 53
+ I Q+S I ++H T++ +Q L N ++ Y+ + A +
Sbjct: 40 LRISQSSYLATQIVHLCNAHRRVTHAARVFAQVRDPNLHLHNAMIKAYAQNHQHRDAVAV 99
Query: 54 YKQLQQIYTHSHSPLPPLF----DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHV 109
Y ++ + T PP D FTY FL++ C + LG Q+H + + G S
Sbjct: 100 YIRMLRCPTS-----PPDGHAGGDRFTYPFLLKACGGTAALELGKQVHTHVVRSGCDSSA 154
Query: 110 YVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCR 169
V +L+ MY G L + K+FDEM ER++V+WN++I+ + G++ A +LF MP +
Sbjct: 155 IVQNSLIEMYTRAGDLALAHKVFDEMRERDVVSWNMLISAHARLGQMRKATALFNSMPDK 214
Query: 170 NVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLI 229
+V+WT ++ GYT + A+ FR M E EP +++I+AVLPA Q G ++ + I
Sbjct: 215 TIVTWTAMVSGYTTVGDYPGAVDAFRSM-QTEGFEPDDVSIVAVLPACAQLGALELGRWI 273
Query: 230 HGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMH 289
+ Y ++ G + N L++ YAKCGCI A +LF+ ++ K+++SW+++I G A H
Sbjct: 274 YAYCKRHGMLT-STHICNALMEMYAKCGCIDQALQLFDGMA--DKDVISWSTVIGGLAAH 330
Query: 290 GMGKEAVENFGRMQKVG-LKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIK 348
G EAV F M+K G ++PN +TF+ +L+ACS+ GLV+EGL+ FD+M + V P ++
Sbjct: 331 GRAHEAVWLFTEMEKEGKVRPNVITFVGLLSACSYAGLVDEGLSHFDRMNDVYGVEPGVE 390
Query: 349 HYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILE 408
HYGC++D+LGR+G++ +A +P D VW +LL AC HG+V+ +++E
Sbjct: 391 HYGCVVDLLGRSGQIRRALDLVRDMPVP-ADAKVWGSLLSACRSHGDVDTAVLAAERLVE 449
Query: 409 MERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
+E G+ V++ N+ A R+ D R+ + R+ K PGCSL+
Sbjct: 450 LEPDDVGNLVMLANVYAAARRWSDVASTRKAIRSRSMRKTPGCSLI 495
>gi|359497398|ref|XP_002270940.2| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 640
Score = 287 bits (735), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 173/518 (33%), Positives = 274/518 (52%), Gaps = 77/518 (14%)
Query: 1 MHILQNSQTPNNITTQIHSHLLTT----------------------NSLLHHSQLF---- 34
M +LQN+ N I QIH+ ++ T N LL+ +F
Sbjct: 7 MSLLQNATKLNQII-QIHALIIKTSLDGNNFVLAKLLRRLFACSSANDLLYARSVFDEIP 65
Query: 35 -------NTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATL 87
NT++ Y +++PQ++ L+ Q++ H P+ DS++ S +I+ C L
Sbjct: 66 SPDTFIWNTMIRAYLNSQNPQESMSLFFQMR------HQECIPI-DSYSLSLVIQACGRL 118
Query: 88 SHPNLGTQLHAVISKVGFQSHVYVNTALVNMY---------------------------- 119
P G +LH + K+G S ++V TAL+ MY
Sbjct: 119 KDPGNGQKLHTQVLKIGLGSDLFVETALIEMYAKFGDIEIARNILDEMAHPDLVPYNVLL 178
Query: 120 ---VSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTG 176
V +G + + LFD MPER+LV+WN MI G G++ A+ LF+ R+++SW+
Sbjct: 179 AEYVRVGEINLAHDLFDRMPERDLVSWNTMIHGHASLGDVGTAKKLFDRTCERDLISWSS 238
Query: 177 IIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKR 236
+I Y + +SNEAL LF +M P ++T+++VL A G + ++IH E R
Sbjct: 239 MIAAYAKARQSNEALRLFHEMQLANVL-PDKVTMVSVLSACGDVGALGMGKMIHECIE-R 296
Query: 237 GFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAV 296
D+++ L+D YAKCG I ++ ++F + +++ +W+++I G A HG G+ A+
Sbjct: 297 NRIEIDLKLGTSLVDMYAKCGDIDNSLRVFN--GMNNRDVFAWSAMIMGLANHGFGELAL 354
Query: 297 ENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDM 356
++F +M +KPN VTF+ VL+ACSH GLV+EG +F M + +V P I+HYGC++D+
Sbjct: 355 DHFSKMISEDIKPNDVTFIGVLSACSHIGLVDEGWTYFTSMSKVYDVSPKIEHYGCVVDI 414
Query: 357 LGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGD 416
LGRAGRL++A + +P D +VWR LLGAC + NVE+ E T +LE+E G+
Sbjct: 415 LGRAGRLQEAMELIKSMPFA-PDAIVWRALLGACRIYKNVEIAEEATVNLLELEPHVDGN 473
Query: 417 YVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
YVL+ NI + + +RR+M N KVPG S +
Sbjct: 474 YVLLSNIYSQAKEWDKVVNVRRMMKNINIQKVPGSSSI 511
>gi|297724167|ref|NP_001174447.1| Os05g0439300 [Oryza sativa Japonica Group]
gi|46981301|gb|AAT07619.1| putative pentatricopeptide repeat-containing protein [Oryza sativa
Japonica Group]
gi|215769333|dbj|BAH01562.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255676403|dbj|BAH93175.1| Os05g0439300 [Oryza sativa Japonica Group]
Length = 551
Score = 287 bits (735), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 158/466 (33%), Positives = 261/466 (56%), Gaps = 22/466 (4%)
Query: 1 MHILQNSQTPNNITTQIHSHLLTTNSLLHHSQ-------LFNTLLHFYSLAESPQKAFLL 53
+ I Q+S I ++H T++ +Q L N ++ Y+ + A +
Sbjct: 40 LRISQSSYLATQIVHLCNAHRRVTHAARVFAQVRDPNLHLHNAMIKAYAQNHQHRDAVAV 99
Query: 54 YKQLQQIYTHSHSPLPPLF----DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHV 109
Y ++ + T PP D FTY FL++ C + LG Q+H + + G S
Sbjct: 100 YIRMLRCPTS-----PPDGHAGGDRFTYPFLLKACGGTAALELGKQVHTHVVRSGCDSSA 154
Query: 110 YVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCR 169
V +L+ MY G L + K+FDEM ER++V+WN++I+ + G++ A +LF MP +
Sbjct: 155 IVQNSLIEMYTRAGDLALAHKVFDEMRERDVVSWNMLISAHARLGQMRKATALFNSMPDK 214
Query: 170 NVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLI 229
+V+WT ++ GYT + A+ FR M E EP +++I+AVLPA Q G ++ + I
Sbjct: 215 TIVTWTAMVSGYTTVGDYPGAVDAFRSM-QTEGFEPDDVSIVAVLPACAQLGALELGRWI 273
Query: 230 HGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMH 289
+ Y ++ G + N L++ YAKCGCI A +LF+ ++ K+++SW+++I G A H
Sbjct: 274 YAYCKRHGMLT-STHICNALMEMYAKCGCIDQALQLFDGMA--DKDVISWSTVIGGLAAH 330
Query: 290 GMGKEAVENFGRMQKVG-LKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIK 348
G EAV F M+K G ++PN +TF+ +L+ACS+ GLV+EGL+ FD+M + V P ++
Sbjct: 331 GRAHEAVWLFTEMEKEGKVRPNVITFVGLLSACSYAGLVDEGLSHFDRMNDVYGVEPGVE 390
Query: 349 HYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILE 408
HYGC++D+LGR+G++ +A +P D VW +LL AC HG+V+ +++E
Sbjct: 391 HYGCVVDLLGRSGQIRRALDLVRDMPVP-ADAKVWGSLLSACRSHGDVDTAVLAAERLVE 449
Query: 409 MERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
+E G+ V++ N+ A R+ D R+ + R+ K PGCSL+
Sbjct: 450 LEPDDVGNLVMLANVYAAARRWSDVASTRKAIRSRSMRKTPGCSLI 495
>gi|449457516|ref|XP_004146494.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Cucumis sativus]
Length = 650
Score = 287 bits (735), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 151/381 (39%), Positives = 232/381 (60%), Gaps = 6/381 (1%)
Query: 74 SFTYSFLIRTCATLSHPNLGTQLHA-VISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLF 132
SFT+S L + C + +LG Q+HA I GF S +YV +++++YV GFL + K+F
Sbjct: 142 SFTFSALFKACGAALNMDLGKQVHAQTILIGGFASDLYVGNSMIDLYVKCGFLGCARKVF 201
Query: 133 DEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALA 192
DEM ER++V+W +I K+G++E A LF+++P +++V+WT ++ GY + R EAL
Sbjct: 202 DEMSERDVVSWTELIVAYAKYGDMESASGLFDDLPLKDMVAWTAMVTGYAQNGRPKEALE 261
Query: 193 LFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGF-TAFDIRVLNCLID 251
F+KM E E+T+ V+ A Q G VK I E+ GF + ++ V + LID
Sbjct: 262 YFQKMQDVG-METDEVTLAGVISACAQLGAVKHANWIRDIAERSGFGPSGNVVVGSALID 320
Query: 252 TYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNR 311
Y+KCG A K+FE ++ +N+ S++S+I G+AMHG A++ F M K ++PN+
Sbjct: 321 MYSKCGSPDEAYKVFE--VMKERNVFSYSSMILGYAMHGRAHSALQLFHDMLKTEIRPNK 378
Query: 312 VTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTAL 371
VTF+ +L+ACSH GLVE+G F KM + V P HY C++D+LGRAG LE+A
Sbjct: 379 VTFIGILSACSHAGLVEQGRQLFAKMEKFFGVAPSPDHYACMVDLLGRAGCLEEALDLVK 438
Query: 372 GIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFG 431
+P E + VW LLGAC HGN ++ + ++ ++E G+Y+L+ NI A GR+
Sbjct: 439 TMPME-PNGGVWGALLGACRIHGNPDIAQIAANELFKLEPNGIGNYILLSNIYASAGRWE 497
Query: 432 DAERLRRVMDERNAFKVPGCS 452
+ +LR+V+ E+ K PGCS
Sbjct: 498 EVSKLRKVIREKGFKKNPGCS 518
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 104/418 (24%), Positives = 162/418 (38%), Gaps = 109/418 (26%)
Query: 95 QLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKL--FDEMPERNLVTWNVMITGLVK 152
Q+HA I + G YV T L+ M + S L F ++ N W MI G
Sbjct: 60 QVHAHIIRNGLSQCSYVLTKLIRMLTKVDVPMGSYPLLVFGQVNYPNPFLWTAMIRGYAL 119
Query: 153 WGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILA 212
G L + + YTRM R P T A
Sbjct: 120 QGLLSESTNF------------------YTRMRRDG--------------VGPVSFTFSA 147
Query: 213 VLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVE 272
+ A ++ + +H G A D+ V N +ID Y KCG + A K+F+++S E
Sbjct: 148 LFKACGAALNMDLGKQVHAQTILIGGFASDLYVGNSMIDLYVKCGFLGCARKVFDEMS-E 206
Query: 273 R------------------------------KNLVSWTSIISGFAMHGMGKEAVENFGRM 302
R K++V+WT++++G+A +G KEA+E F +M
Sbjct: 207 RDVVSWTELIVAYAKYGDMESASGLFDDLPLKDMVAWTAMVTGYAQNGRPKEALEYFQKM 266
Query: 303 QKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLP--DIKHYGCLIDMLGRA 360
Q VG++ + VT V++AC+ G V+ N+ + E P ++ LIDM +
Sbjct: 267 QDVGMETDEVTLAGVISACAQLGAVKHA-NWIRDIAERSGFGPSGNVVVGSALIDMYSKC 325
Query: 361 GRLEQAEKT---------------ALG-----------------IPSEI-TDVVVWRTLL 387
G ++A K LG + +EI + V + +L
Sbjct: 326 GSPDEAYKVFEVMKERNVFSYSSMILGYAMHGRAHSALQLFHDMLKTEIRPNKVTFIGIL 385
Query: 388 GACSFHGNVEMGERVTRKILEMERGYG-----GDYVLMYNILAGVGRFGDAERLRRVM 440
ACS G VE G ++ K ME+ +G Y M ++L G +A L + M
Sbjct: 386 SACSHAGLVEQGRQLFAK---MEKFFGVAPSPDHYACMVDLLGRAGCLEEALDLVKTM 440
>gi|224141419|ref|XP_002324070.1| predicted protein [Populus trichocarpa]
gi|222867072|gb|EEF04203.1| predicted protein [Populus trichocarpa]
Length = 546
Score = 287 bits (734), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 165/456 (36%), Positives = 256/456 (56%), Gaps = 48/456 (10%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNL 92
++NT++ S +++P K LLY Q++ + + P D FT+SFL++ C L
Sbjct: 80 MWNTMMRGSSQSKNPSKVVLLYTQME------NRGVKP--DKFTFSFLLKGCTRLEWRKT 131
Query: 93 GTQLHAVISKVGFQSHVYVN-------------------------------TALVNMYVS 121
G +H + K GF+ + +V +AL Y
Sbjct: 132 GFCVHGKVLKYGFEVNSFVRNTLIYFHSNCGDLVIARSIFYDLPERSVVSWSALTAGYAR 191
Query: 122 LGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGY 181
G L + ++FDEMP ++LV+WNVMITG VK GE+E AR+LF+E P ++VV+W +I GY
Sbjct: 192 RGELGVARQIFDEMPVKDLVSWNVMITGYVKNGEMENARTLFDEAPEKDVVTWNTMIAGY 251
Query: 182 TRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAF 241
+AL +F +M P E+T+L++L A GD++ + +H + T
Sbjct: 252 VLRGEQRQALEMFEEMRNVGEC-PDEVTMLSLLSACADLGDLQVGRKLHCSISE--MTRG 308
Query: 242 DIRVL--NCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENF 299
D+ VL N L+D YAKCG I A ++F+ + K++ +W S+I G A HG +E+++ F
Sbjct: 309 DLSVLLGNALVDMYAKCGSIEIALQVFK--KMREKDVTTWNSVIGGLAFHGHAEESIKLF 366
Query: 300 GRMQKV-GLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLG 358
MQ + +KPN +TF+ V+ ACSH G VEEG +F M E ++ P++ H+GC++D+LG
Sbjct: 367 AEMQALKNIKPNEITFVGVIVACSHAGNVEEGRRYFKLMRERYDIEPNMIHHGCMVDLLG 426
Query: 359 RAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYV 418
RAG L +A + + E + ++WRTLLGAC HGNVE+G ++L++ R GDYV
Sbjct: 427 RAGLLSEAFELIAKMEIE-PNAIIWRTLLGACRVHGNVELGRLANERLLKLRRDESGDYV 485
Query: 419 LMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
L+ NI A G + AE +R++MD+ K G SL+
Sbjct: 486 LLSNIYASAGEWDGAEEVRKLMDDGGVRKEAGRSLI 521
>gi|225446849|ref|XP_002279693.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
chloroplastic [Vitis vinifera]
gi|302143555|emb|CBI22116.3| unnamed protein product [Vitis vinifera]
Length = 533
Score = 287 bits (734), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 164/442 (37%), Positives = 247/442 (55%), Gaps = 21/442 (4%)
Query: 13 ITTQIHSHLLTTNSLLHHSQLFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLF 72
+ TQIHS L + +NT++ +S + +P A L+ + + S P
Sbjct: 80 VFTQIHSPNLFS---------WNTIIRGFSQSSTPHHAISLF--IDMLIVSSVQP----- 123
Query: 73 DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLF 132
TY + + A L + G QLH + K+G Q ++ ++ MY + GFL + K F
Sbjct: 124 HRLTYPSVFKAYAQLGLAHYGAQLHGRVIKLGLQFDPFIRNTIIYMYANCGFLSEMWKAF 183
Query: 133 DEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALA 192
E + ++V WN MI GL K GE++ +R LF+EMP RN VSW +I GY R R EAL
Sbjct: 184 YERMDFDIVAWNSMIMGLAKCGEVDESRKLFDEMPLRNTVSWNSMISGYVRNGRLREALD 243
Query: 193 LFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDT 252
LF +M E +PSE T++++L A + G +K + IH Y K F ++ V +ID
Sbjct: 244 LFGQMQE-ERIKPSEFTMVSLLNASARLGALKQGEWIHDYIRKNNFE-LNVIVTASIIDM 301
Query: 253 YAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRV 312
Y KCG I A ++FE + K L SW ++I G AM+G EA++ F R++ L+P+ V
Sbjct: 302 YCKCGSIGEAFQVFEMAPL--KGLSSWNTMILGLAMNGCENEAIQLFSRLECSNLRPDDV 359
Query: 313 TFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALG 372
TF+ VL AC++ GLV++ +F M + ++ P IKHY C++D LGRAG LE+AE+
Sbjct: 360 TFVGVLTACNYSGLVDKAKEYFSLMSKTYKIEPSIKHYSCMVDTLGRAGLLEEAEELIRN 419
Query: 373 IPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGD 432
+P D ++W +LL AC HGNVE+ +R + I++++ YVL+ NI A +F +
Sbjct: 420 MPVN-PDAIIWSSLLSACRKHGNVELAKRAAKHIVDLDGNDSCGYVLLSNIYAASDQFEE 478
Query: 433 AERLRRVMDERNAFKVPGCSLV 454
A R M E+ K PGCSL+
Sbjct: 479 AMEQRLSMKEKQIEKEPGCSLI 500
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 127/271 (46%), Gaps = 35/271 (12%)
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
G++ +A +F ++ N+ SW II G+++ + + A++LF M+ +P +T +V
Sbjct: 72 GDINYAYLVFTQIHSPNLFSWNTIIRGFSQSSTPHHAISLFIDMLIVSSVQPHRLTYPSV 131
Query: 214 LPAIWQNGDVKSCQLIHGYGEKRGFT------------------------------AFDI 243
A Q G +HG K G FDI
Sbjct: 132 FKAYAQLGLAHYGAQLHGRVIKLGLQFDPFIRNTIIYMYANCGFLSEMWKAFYERMDFDI 191
Query: 244 RVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQ 303
N +I AKCG + + KLF+++ + +N VSW S+ISG+ +G +EA++ FG+MQ
Sbjct: 192 VAWNSMIMGLAKCGEVDESRKLFDEMPL--RNTVSWNSMISGYVRNGRLREALDLFGQMQ 249
Query: 304 KVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRL 363
+ +KP+ T +S+LNA + G +++G + + + ++ +IDM + G +
Sbjct: 250 EERIKPSEFTMVSLLNASARLGALKQG-EWIHDYIRKNNFELNVIVTASIIDMYCKCGSI 308
Query: 364 EQAEKTALGIPSEITDVVVWRTLLGACSFHG 394
+A + P + + W T++ + +G
Sbjct: 309 GEAFQVFEMAP--LKGLSSWNTMILGLAMNG 337
>gi|15239745|ref|NP_199702.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170778|sp|Q9FI80.1|PP425_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g48910
gi|10177180|dbj|BAB10314.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|15810559|gb|AAL07167.1| putative selenium-binding protein [Arabidopsis thaliana]
gi|332008359|gb|AED95742.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 646
Score = 287 bits (734), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 151/396 (38%), Positives = 244/396 (61%), Gaps = 19/396 (4%)
Query: 73 DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLF 132
+ FT+ +++ CA G Q+H + K GF +V + LV MYV GF+KD+ LF
Sbjct: 127 NRFTFPSVLKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLF 186
Query: 133 DE---------MPER-----NLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGII 178
+ M +R +V WNVMI G ++ G+ + AR LF++M R+VVSW +I
Sbjct: 187 YKNIIEKDMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMI 246
Query: 179 DGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGF 238
GY+ +A+ +FR+M + P+ +T+++VLPAI + G ++ + +H Y E G
Sbjct: 247 SGYSLNGFFKDAVEVFREMKKGD-IRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGI 305
Query: 239 TAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVEN 298
D+ + + LID Y+KCG I A +FE + R+N+++W+++I+GFA+HG +A++
Sbjct: 306 RIDDV-LGSALIDMYSKCGIIEKAIHVFE--RLPRENVITWSAMINGFAIHGQAGDAIDC 362
Query: 299 FGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLG 358
F +M++ G++P+ V ++++L ACSHGGLVEEG +F +MV + P I+HYGC++D+LG
Sbjct: 363 FCKMRQAGVRPSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLG 422
Query: 359 RAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYV 418
R+G L++AE+ L +P + D V+W+ LLGAC GNVEMG+RV +++M G YV
Sbjct: 423 RSGLLDEAEEFILNMPIKPDD-VIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYV 481
Query: 419 LMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
+ N+ A G + + +R M E++ K PGCSL+
Sbjct: 482 ALSNMYASQGNWSEVSEMRLRMKEKDIRKDPGCSLI 517
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/288 (28%), Positives = 135/288 (46%), Gaps = 51/288 (17%)
Query: 155 ELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNE--ALALFRKMVACEYTEPSEITILA 212
+L++A +F +MP RN SW II G++ + A+ LF +M++ E+ EP+ T +
Sbjct: 74 DLDYAHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPS 133
Query: 213 VLPAIWQNGDVKSCQLIHGYGEKRGFTA------------------FDIRVL-------- 246
VL A + G ++ + IHG K GF D RVL
Sbjct: 134 VLKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEK 193
Query: 247 ------------------NCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAM 288
N +ID Y + G +A LF+ + ++++VSW ++ISG+++
Sbjct: 194 DMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFD--KMRQRSVVSWNTMISGYSL 251
Query: 289 HGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIK 348
+G K+AVE F M+K ++PN VT +SVL A S G +E G + E+ + D
Sbjct: 252 NGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELG-EWLHLYAEDSGIRIDDV 310
Query: 349 HYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNV 396
LIDM + G +E+A +P E +V+ W ++ + HG
Sbjct: 311 LGSALIDMYSKCGIIEKAIHVFERLPRE--NVITWSAMINGFAIHGQA 356
>gi|359478743|ref|XP_002282912.2| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Vitis vinifera]
Length = 642
Score = 286 bits (733), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 153/382 (40%), Positives = 224/382 (58%), Gaps = 5/382 (1%)
Query: 73 DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLF 132
D T ++ +CA L +LG + H I + G + V + AL++MY+ G L+ + KLF
Sbjct: 207 DEVTMIGVVSSCAQLEDLDLGRESHCYIEENGLKLTVPLANALMDMYMKCGNLESARKLF 266
Query: 133 DEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALA 192
D M + +V+W M+ G + G L+ A LF+EMP ++VV W +I GY NR EALA
Sbjct: 267 DSMTNKTMVSWTTMVVGYAQSGLLDMAWKLFDEMPDKDVVPWNAMIGGYVHANRGKEALA 326
Query: 193 LFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDT 252
LF +M A P E+T+++ L A Q G + IH Y EK + ++ + LID
Sbjct: 327 LFNEMQAMN-INPDEVTMVSCLSACSQLGALDVGIWIHHYIEKHELS-LNVALGTALIDM 384
Query: 253 YAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRV 312
YAKCG I A ++F+++ +N ++WT+IISG A+HG A+ F M + P+ V
Sbjct: 385 YAKCGKITKAIQVFQELP--GRNSLTWTAIISGLALHGNAHGAIAYFSEMIDNSVMPDEV 442
Query: 313 TFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALG 372
TFL +L+AC HGGLVEEG +F +M + + P +KHY C++D+LGRAG LE+AE+
Sbjct: 443 TFLGLLSACCHGGLVEEGRKYFSQMSSKFNLSPKLKHYSCMVDLLGRAGLLEEAEELIKS 502
Query: 373 IPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGD 432
+P E D VVW L AC HGNV MGER K+L+M+ G YVL+ N+ + +
Sbjct: 503 MPIE-ADAVVWGALFFACRIHGNVLMGERAASKLLQMDPHDSGIYVLLANMYGEAEMWKE 561
Query: 433 AERLRRVMDERNAFKVPGCSLV 454
A + R++M +R K PGCS +
Sbjct: 562 AGKARKLMRQRGVEKTPGCSSI 583
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 107/394 (27%), Positives = 189/394 (47%), Gaps = 76/394 (19%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+N + + +E+P++A +LYK++ Q P D++TY L + CA LS +G
Sbjct: 74 WNVAIRGFLDSENPREAVVLYKRVLQ--CDGTKP-----DNYTYPLLFKACARLSLIRMG 126
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
+++ + +GF S ++V+ A++++ VS G L + K+FD+ R+LV+WN MI
Sbjct: 127 SEILGHVLHLGFDSDIFVSNAVIHLLVSCGDLDGARKMFDKSCVRDLVSWNSMI------ 180
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
+GY R + EAL +R+M E +P E+T++ V
Sbjct: 181 -------------------------NGYVRRGWAYEALNFYREM-KVEGIKPDEVTMIGV 214
Query: 214 LPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVER 273
+ + Q D+ + H Y E+ G + + N L+D Y KCG + SA KLF+ S+
Sbjct: 215 VSSCAQLEDLDLGRESHCYIEENGLK-LTVPLANALMDMYMKCGNLESARKLFD--SMTN 271
Query: 274 KNLVSWTSIISGFAMHGM-------------------------------GKEAVENFGRM 302
K +VSWT+++ G+A G+ GKEA+ F M
Sbjct: 272 KTMVSWTTMVVGYAQSGLLDMAWKLFDEMPDKDVVPWNAMIGGYVHANRGKEALALFNEM 331
Query: 303 QKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGR 362
Q + + P+ VT +S L+ACS G ++ G+ + +E+ E+ ++ LIDM + G+
Sbjct: 332 QAMNINPDEVTMVSCLSACSQLGALDVGI-WIHHYIEKHELSLNVALGTALIDMYAKCGK 390
Query: 363 LEQAEKTALGIPSEITDVVVWRTLLGACSFHGNV 396
+ +A + +P + + W ++ + HGN
Sbjct: 391 ITKAIQVFQELPGR--NSLTWTAIISGLALHGNA 422
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 124/258 (48%), Gaps = 6/258 (2%)
Query: 145 VMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTE 204
+ + +W +L++ ++ N SW I G+ EA+ L+++++ C+ T+
Sbjct: 45 IAFCAISEWRDLDYCTNILFNTRNPNTFSWNVAIRGFLDSENPREAVVLYKRVLQCDGTK 104
Query: 205 PSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASK 264
P T + A + ++ I G+ GF + DI V N +I CG + A K
Sbjct: 105 PDNYTYPLLFKACARLSLIRMGSEILGHVLHLGFDS-DIFVSNAVIHLLVSCGDLDGARK 163
Query: 265 LFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHG 324
+F+ V ++LVSW S+I+G+ G EA+ + M+ G+KP+ VT + V+++C+
Sbjct: 164 MFDKSCV--RDLVSWNSMINGYVRRGWAYEALNFYREMKVEGIKPDEVTMIGVVSSCAQL 221
Query: 325 GLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWR 384
++ G +EE + + L+DM + G LE A K + ++ +V W
Sbjct: 222 EDLDLGRESH-CYIEENGLKLTVPLANALMDMYMKCGNLESARKLFDSMTNKT--MVSWT 278
Query: 385 TLLGACSFHGNVEMGERV 402
T++ + G ++M ++
Sbjct: 279 TMVVGYAQSGLLDMAWKL 296
>gi|449442683|ref|XP_004139110.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
gi|449516005|ref|XP_004165038.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 609
Score = 286 bits (733), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 163/458 (35%), Positives = 260/458 (56%), Gaps = 19/458 (4%)
Query: 13 ITTQIHSHLLTTNSLLHH-SQLFNTLLHFYSLAES-PQKAFLLYKQLQQIYTHSHSPLPP 70
ITT + H + TN LL S +F + + + + + PQ LY + ++ S +
Sbjct: 25 ITTGLILHPIPTNKLLKQLSSIFAPISYAHMVFDHFPQPDLFLYNTIIKVLAFSTTSSAD 84
Query: 71 LFDSF--------------TYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALV 116
F F +++F + C + G Q+ K+G +++++V AL+
Sbjct: 85 SFTKFRSLIREERLVPNQYSFAFAFKGCGSGVGVLEGEQVRVHAIKLGLENNLFVTNALI 144
Query: 117 NMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTG 176
MYV+L F+ D+ K+FD P R++ +WN+M++G + G+++ AR LF+EMP ++VVSWT
Sbjct: 145 GMYVNLDFVVDARKVFDWSPNRDMYSWNIMLSGYARLGKMDEARQLFDEMPEKDVVSWTT 204
Query: 177 IIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKR 236
+I G ++ EAL +F M+A + P+E T+ + L A + + +H Y +K
Sbjct: 205 MISGCLQVGYFMEALDIFHNMLA-KGMSPNEYTLASSLAACANLVALDQGRWMHVYIKKN 263
Query: 237 GFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAV 296
+ R+L LID YAKCG + ASKLF ++ + W ++I GFA+HG KEA+
Sbjct: 264 NIQ-MNERLLAGLIDMYAKCGELEFASKLFNSNPRLKRKVWPWNAMIGGFAVHGKSKEAI 322
Query: 297 ENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDM 356
E F +M+ + PN+VTF+++LNACSHG VEEG +F+ M V P+++HYGCL+D+
Sbjct: 323 EVFEQMKIEKVSPNKVTFVALLNACSHGNRVEEGRYYFESMASHYRVKPELEHYGCLVDL 382
Query: 357 LGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGD 416
LGRAGRL++AE+ + DV +W LL AC H + EMGERV + + E++ + G
Sbjct: 383 LGRAGRLKEAEEIISSM-HLTPDVAIWGALLSACKIHKDAEMGERVGKIVKELDPNHLGC 441
Query: 417 YVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
+VL+ NI + G + +A LR + E K PGCS +
Sbjct: 442 HVLLANIYSLTGNWNEARTLREKIAESGKKKTPGCSSI 479
>gi|255576950|ref|XP_002529360.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223531180|gb|EEF33027.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 683
Score = 286 bits (733), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 159/424 (37%), Positives = 244/424 (57%), Gaps = 16/424 (3%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+N ++ Y + A ++ ++Q+ S L P D T + C L LG
Sbjct: 206 WNVMISGYVKCRRFEDAINVFCRMQE-----ESGLMP--DEATVVSTLSACTALKRLELG 258
Query: 94 TQLHAVI-SKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVK 152
++H + V F + AL++MY G L + +F+EMP +N++ W M++G
Sbjct: 259 KKIHHYVRDNVKFTP--IIGNALLDMYCKCGCLSIARAVFEEMPSKNVICWTTMVSGYAN 316
Query: 153 WGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILA 212
GELE AR LFE P R+VV WT +I+GY + NR +EA+ALFR+M +P + +++
Sbjct: 317 CGELEEARELFEGSPIRDVVIWTAMINGYVQFNRFDEAVALFREM-QIRKVKPDKFIVVS 375
Query: 213 VLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVE 272
+L Q G ++ + IH + ++ D V LI+ YAKCG I A ++F + V
Sbjct: 376 LLTGCAQTGAIEQGKWIHEFIDENRI-PIDAVVGTALIEMYAKCGFIEKALEIFYGLRV- 433
Query: 273 RKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLN 332
K+ SWTSII G AM+G +A+E F +M++ G++P+ +TF+ VL+ACSHGGLVEEG
Sbjct: 434 -KDTASWTSIICGLAMNGKTSKALELFSKMKQAGVRPDDITFIGVLSACSHGGLVEEGRK 492
Query: 333 FFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVV--WRTLLGAC 390
FF+ M E ++ P ++HYGCL+D+LGRAG L +AE+ IP E + V + +LL AC
Sbjct: 493 FFNSMRMEYQIKPKVEHYGCLVDLLGRAGLLNEAEELIKKIPDENKAITVPLYGSLLSAC 552
Query: 391 SFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPG 450
+GNVEMGERV +++++ E + L+ NI A R+ D ++RR M + K PG
Sbjct: 553 RIYGNVEMGERVAKQLVKFESSDSSVHTLLANIYAFADRWEDVTKVRRKMKDLGVKKTPG 612
Query: 451 CSLV 454
CS +
Sbjct: 613 CSSI 616
Score = 124 bits (311), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 115/490 (23%), Positives = 200/490 (40%), Gaps = 123/490 (25%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNL 92
++N ++ ++ + ++ +L+ +L++ L P D+FTY F+ + L +
Sbjct: 104 IYNLIIKAFAKKGNYKRTLVLFSKLRE------DGLWP--DNFTYPFVFKAIGYLGEVSK 155
Query: 93 GTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVK 152
+L +++K G + YV +L++MY L L D K+
Sbjct: 156 AEKLRGLVTKTGLEFDTYVRNSLIDMYAQLA-LTDVMKM--------------------- 193
Query: 153 WGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILA 212
LF+EMP R+V+SW +I GY + R +A+ +F +M P E T+++
Sbjct: 194 ---------LFDEMPDRDVISWNVMISGYVKCRRFEDAINVFCRMQEESGLMPDEATVVS 244
Query: 213 VLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVE 272
L A ++ + IH Y R F + N L+D Y KCGC+ A +FE++
Sbjct: 245 TLSACTALKRLELGKKIHHY--VRDNVKFTPIIGNALLDMYCKCGCLSIARAVFEEMP-- 300
Query: 273 RKNLVSWTSIISGFAMHG-------------------------------MGKEAVENFGR 301
KN++ WT+++SG+A G EAV F
Sbjct: 301 SKNVICWTTMVSGYANCGELEEARELFEGSPIRDVVIWTAMINGYVQFNRFDEAVALFRE 360
Query: 302 MQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAG 361
MQ +KP++ +S+L C+ G +E+G + + ++E + D LI+M + G
Sbjct: 361 MQIRKVKPDKFIVVSLLTGCAQTGAIEQG-KWIHEFIDENRIPIDAVVGTALIEMYAKCG 419
Query: 362 RLEQAEKTALGIPSEITDVVVWRTL----------------------------------- 386
+E+A + G+ + D W ++
Sbjct: 420 FIEKALEIFYGL--RVKDTASWTSIICGLAMNGKTSKALELFSKMKQAGVRPDDITFIGV 477
Query: 387 LGACSFHGNVEMGE------RVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERL-RRV 439
L ACS G VE G R+ +I YG + ++L G +AE L +++
Sbjct: 478 LSACSHGGLVEEGRKFFNSMRMEYQIKPKVEHYG----CLVDLLGRAGLLNEAEELIKKI 533
Query: 440 MDERNAFKVP 449
DE A VP
Sbjct: 534 PDENKAITVP 543
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 79/320 (24%), Positives = 138/320 (43%), Gaps = 45/320 (14%)
Query: 81 IRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNL 140
+++C +++H Q+HA I +VG + V++ + F D
Sbjct: 44 LKSCKSMTHLK---QIHAQIFRVGLHQDI------VSLNKLMAFCTDPFN---------- 84
Query: 141 VTWNVMITGLVKWGELEFARSLFEEM--PCRNVVSWTGIIDGYTRMNRSNEALALFRKMV 198
G L +A +F+ + PC ++ + II + + L LF K+
Sbjct: 85 -------------GNLNYAEKMFKYIRYPC--LLIYNLIIKAFAKKGNYKRTLVLFSKLR 129
Query: 199 ACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGC 258
+ P T V AI G+V + + G K G FD V N LID YA+
Sbjct: 130 E-DGLWPDNFTYPFVFKAIGYLGEVSKAEKLRGLVTKTGL-EFDTYVRNSLIDMYAQLAL 187
Query: 259 IFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQ-KVGLKPNRVTFLSV 317
LF+++ ++++SW +ISG+ ++A+ F RMQ + GL P+ T +S
Sbjct: 188 TDVMKMLFDEMP--DRDVISWNVMISGYVKCRRFEDAINVFCRMQEESGLMPDEATVVST 245
Query: 318 LNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEI 377
L+AC+ +E G + + + P I + L+DM + G L A +PS+
Sbjct: 246 LSACTALKRLELGKKIHHYVRDNVKFTPIIGN--ALLDMYCKCGCLSIARAVFEEMPSK- 302
Query: 378 TDVVVWRTLLGACSFHGNVE 397
+V+ W T++ + G +E
Sbjct: 303 -NVICWTTMVSGYANCGELE 321
>gi|225441187|ref|XP_002266244.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 722
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 160/437 (36%), Positives = 250/437 (57%), Gaps = 15/437 (3%)
Query: 22 LTTNSLLHHSQLFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLI 81
L SL+ +NT++ Y+ P+ A L+ ++Q +S + P D FT+ L
Sbjct: 168 LFDESLVRDLVSYNTMIKGYAEVNQPESALCLFGEMQ------NSGILP--DEFTFVALF 219
Query: 82 RTCATLSHPNLGTQLHAVISK--VGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEM-PER 138
C+ L+ PN+G Q+HA + K S++ + +A+V+MY G + + ++F M +
Sbjct: 220 SVCSVLNEPNVGKQIHAQVYKNLRSIDSNILLKSAIVDMYAKCGLINIAERVFSTMGTSK 279
Query: 139 NLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMV 198
+ W+ M+ G + GE+ AR LF M R+V+SWT +I GY++ + +EAL LF++M
Sbjct: 280 SAAAWSSMVCGYARCGEINVARKLFNHMHERDVISWTAMISGYSQAGQCSEALELFKEME 339
Query: 199 ACEYTEPSEITILAVLPAIWQNGDVK-SCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCG 257
A +P E+T++AVL A + G +L H Y E F I + ++D YAKCG
Sbjct: 340 ALG-IKPDEVTLVAVLSACARLGAFDLGKRLYHQYIENGVFNQNTI-LTAAVMDMYAKCG 397
Query: 258 CIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSV 317
I SA ++F + K + S+I+G A HG+G+ A+ F + GLKP+ VTF+ V
Sbjct: 398 SIDSALEIFRRVGKNMKTGFVFNSMIAGLAQHGLGETAITVFRELISTGLKPDEVTFVGV 457
Query: 318 LNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEI 377
L AC H GL+EEG F+ M + P ++HYGC++D+LGR G LE+A +P E
Sbjct: 458 LCACGHSGLIEEGKKLFESMFNAYGIKPQMEHYGCMVDLLGRYGCLEEAYDLVQKMPFE- 516
Query: 378 TDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLR 437
+ V+WR LL AC HGNV++GE +K+LEME +G YVL+ NILA ++ +A ++R
Sbjct: 517 ANSVIWRALLSACRTHGNVKIGEIAGQKLLEMEAQHGARYVLLSNILADANQWEEARQVR 576
Query: 438 RVMDERNAFKVPGCSLV 454
+VM++ K PG S +
Sbjct: 577 KVMEDHGIRKPPGWSYI 593
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 117/464 (25%), Positives = 213/464 (45%), Gaps = 75/464 (16%)
Query: 18 HSHLLTTNSLLHHSQLFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTY 77
HS LL + + ++NT++ YS +++P++A +LY + + PP ++FT+
Sbjct: 62 HSRLLFSQIDCPNLFMWNTMIRGYSRSDNPREAIVLYMSMI-----AKGIAPP--NNFTF 114
Query: 78 SFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPE 137
FL+ +CA LS G ++H+ I K GF+S ++V AL+++Y
Sbjct: 115 PFLLNSCARLSSLEPGHEVHSHIIKHGFESDLFVRNALIHLYSV---------------- 158
Query: 138 RNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKM 197
+G L AR+LF+E R++VS+ +I GY +N+ AL LF +M
Sbjct: 159 ---------------FGNLNLARTLFDESLVRDLVSYNTMIKGYAEVNQPESALCLFGEM 203
Query: 198 VACEYTEPSEITILAVLPAIWQNGDVKSCQLIHG--YGEKRGFTAFDIRVLNCLIDTYAK 255
P E T +A+ + + IH Y R + +I + + ++D YAK
Sbjct: 204 QNSGIL-PDEFTFVALFSVCSVLNEPNVGKQIHAQVYKNLRSIDS-NILLKSAIVDMYAK 261
Query: 256 CGCIFSASKLFE----------------------DISVERK--------NLVSWTSIISG 285
CG I A ++F +I+V RK +++SWT++ISG
Sbjct: 262 CGLINIAERVFSTMGTSKSAAAWSSMVCGYARCGEINVARKLFNHMHERDVISWTAMISG 321
Query: 286 FAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLP 345
++ G EA+E F M+ +G+KP+ VT ++VL+AC+ G + G + + +E
Sbjct: 322 YSQAGQCSEALELFKEMEALGIKPDEVTLVAVLSACARLGAFDLGKRLYHQYIENGVFNQ 381
Query: 346 DIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRK 405
+ ++DM + G ++ A + + + V+ +++ + HG E V R+
Sbjct: 382 NTILTAAVMDMYAKCGSIDSALEIFRRVGKNMKTGFVFNSMIAGLAQHGLGETAITVFRE 441
Query: 406 ILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDER-NAFKV 448
++ G D V +L G G E +++ + NA+ +
Sbjct: 442 LIST--GLKPDEVTFVGVLCACGHSGLIEEGKKLFESMFNAYGI 483
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 107/215 (49%), Gaps = 4/215 (1%)
Query: 156 LEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLP 215
L+ +R LF ++ C N+ W +I GY+R + EA+ L+ M+A P+ T +L
Sbjct: 60 LDHSRLLFSQIDCPNLFMWNTMIRGYSRSDNPREAIVLYMSMIAKGIAPPNNFTFPFLLN 119
Query: 216 AIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKN 275
+ + ++ +H + K GF + D+ V N LI Y+ G + A LF++ V ++
Sbjct: 120 SCARLSSLEPGHEVHSHIIKHGFES-DLFVRNALIHLYSVFGNLNLARTLFDESLV--RD 176
Query: 276 LVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFD 335
LVS+ ++I G+A + A+ FG MQ G+ P+ TF+++ + CS G
Sbjct: 177 LVSYNTMIKGYAEVNQPESALCLFGEMQNSGILPDEFTFVALFSVCSVLNEPNVGKQIHA 236
Query: 336 KMVEECEVL-PDIKHYGCLIDMLGRAGRLEQAEKT 369
++ + + +I ++DM + G + AE+
Sbjct: 237 QVYKNLRSIDSNILLKSAIVDMYAKCGLINIAERV 271
>gi|359479564|ref|XP_002274514.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 616
Score = 286 bits (731), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 149/423 (35%), Positives = 246/423 (58%), Gaps = 9/423 (2%)
Query: 30 HSQLFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSH 89
+S +F L+ +S +P ++ +LY ++ +S F+ +++ C L
Sbjct: 71 NSFIFFALIKGFSDTSNPVESLILYARMLSCLNYSSGV------EFSIPSVLKACGKLLA 124
Query: 90 PNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITG 149
+ G Q+H + K +V ++V MY+ G ++ + ++FD MP R++V+WN MI G
Sbjct: 125 FDEGRQVHGQVLKTHLWFDPFVGNSMVRMYIDFGEIELARRVFDRMPNRDVVSWNSMIAG 184
Query: 150 LVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEIT 209
+K GE+E A+ +FE M ++VV+WT +I Y + +AL LFR+M++ P
Sbjct: 185 YLKAGEIELAKKVFETMSDKDVVTWTSMISAYVQNRCPMKALDLFREMLSLG-LRPDGPA 243
Query: 210 ILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDI 269
I++VL AI G V+ + +H Y + + LID Y+KCG I +A +F I
Sbjct: 244 IVSVLSAIADLGFVEEGKWLHAYVSMNKIELSSGFIGSALIDMYSKCGYIENAYHVFRSI 303
Query: 270 SVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEE 329
S R+N+ W S+ISG A+HG+ +EA++ F M+++ ++PN +TFL +L+ CSHGGLVEE
Sbjct: 304 S-HRRNIGDWNSMISGLAIHGLAREALDIFVEMERMDIEPNEITFLGLLSTCSHGGLVEE 362
Query: 330 GLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGA 389
G +F+ M E+ +++P I+HYGC+ID+ GRAGRLE A +P E D++ W+ +L A
Sbjct: 363 GQFYFESMHEKYKIVPRIQHYGCMIDLFGRAGRLEDALGVIQNMPFE-ADLLAWKAILSA 421
Query: 390 CSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVP 449
HG++E+G+ + +E+ YVL+ NI A GR+ D ++R +M +R K+
Sbjct: 422 SMKHGHIEIGKSAALRAIELAPDDSSSYVLLSNIYAKAGRWDDVAKIRLMMRQRGVKKIA 481
Query: 450 GCS 452
GCS
Sbjct: 482 GCS 484
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 81/317 (25%), Positives = 142/317 (44%), Gaps = 46/317 (14%)
Query: 134 EMPERNLVTWNVMITGLVKW-------GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNR 186
+M + NL+ ++ L+ + G L++A S+F + N + +I G++ +
Sbjct: 28 QMIKTNLLNHQFTVSRLIAFCSLSGVSGGLDYASSVFSRIQHPNSFIFFALIKGFSDTSN 87
Query: 187 SNEALALFRKMVAC-EYTEPSEITILAVLPAIWQNGDVKSCQLIHG-------------- 231
E+L L+ +M++C Y+ E +I +VL A + + +HG
Sbjct: 88 PVESLILYARMLSCLNYSSGVEFSIPSVLKACGKLLAFDEGRQVHGQVLKTHLWFDPFVG 147
Query: 232 ---------YGE----KRGFTAF---DIRVLNCLIDTYAKCGCIFSASKLFEDISVERKN 275
+GE +R F D+ N +I Y K G I A K+FE +S K+
Sbjct: 148 NSMVRMYIDFGEIELARRVFDRMPNRDVVSWNSMIAGYLKAGEIELAKKVFETMS--DKD 205
Query: 276 LVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFD 335
+V+WTS+IS + + +A++ F M +GL+P+ +SVL+A + G VEEG +
Sbjct: 206 VVTWTSMISAYVQNRCPMKALDLFREMLSLGLRPDGPAIVSVLSAIADLGFVEEG-KWLH 264
Query: 336 KMVEECEVLPDIKHYG-CLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHG 394
V ++ G LIDM + G +E A I S ++ W +++ + HG
Sbjct: 265 AYVSMNKIELSSGFIGSALIDMYSKCGYIENAYHVFRSI-SHRRNIGDWNSMISGLAIHG 323
Query: 395 NVEMGERVTRKILEMER 411
+ +EMER
Sbjct: 324 ---LAREALDIFVEMER 337
>gi|297746342|emb|CBI16398.3| unnamed protein product [Vitis vinifera]
Length = 608
Score = 286 bits (731), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 164/445 (36%), Positives = 248/445 (55%), Gaps = 41/445 (9%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+N + + +E+P++A +LYK++ Q P D++TY L + CA LS +G
Sbjct: 118 WNVAIRGFLDSENPREAVVLYKRVLQ--CDGTKP-----DNYTYPLLFKACARLSLIRMG 170
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITG---- 149
+++ + +GF S ++V+ A++++ VS G L + K+FD+ R+LV+WN MI G
Sbjct: 171 SEILGHVLHLGFDSDIFVSNAVIHLLVSCGDLDGARKMFDKSCVRDLVSWNSMINGYCGN 230
Query: 150 ---------------LVKW----------GELEFARSLFEEMPCRNVVSWTGIIDGYTRM 184
+V W G L+ A LF+EMP ++VV W +I GY
Sbjct: 231 LESARKLFDSMTNKTMVSWTTMVVGYAQSGLLDMAWKLFDEMPDKDVVPWNAMIGGYVHA 290
Query: 185 NRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIR 244
NR EALALF +M A P E+T+++ L A Q G + IH Y EK + ++
Sbjct: 291 NRGKEALALFNEMQAMN-INPDEVTMVSCLSACSQLGALDVGIWIHHYIEKHELS-LNVA 348
Query: 245 VLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQK 304
+ LID YAKCG I A ++F+++ +N ++WT+IISG A+HG A+ F M
Sbjct: 349 LGTALIDMYAKCGKITKAIQVFQELP--GRNSLTWTAIISGLALHGNAHGAIAYFSEMID 406
Query: 305 VGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLE 364
+ P+ VTFL +L+AC HGGLVEEG +F +M + + P +KHY C++D+LGRAG LE
Sbjct: 407 NSVMPDEVTFLGLLSACCHGGLVEEGRKYFSQMSSKFNLSPKLKHYSCMVDLLGRAGLLE 466
Query: 365 QAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNIL 424
+AE+ +P E D VVW L AC HGNV MGER K+L+M+ G YVL+ N+
Sbjct: 467 EAEELIKSMPIE-ADAVVWGALFFACRIHGNVLMGERAASKLLQMDPHDSGIYVLLANMY 525
Query: 425 AGVGRFGDAERLRRVMDERNAFKVP 449
+ +A + R++M +R K P
Sbjct: 526 GEAEMWKEAGKARKLMRQRGVEKTP 550
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 69/310 (22%), Positives = 130/310 (41%), Gaps = 62/310 (20%)
Query: 145 VMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTE 204
+ + +W +L++ ++ N SW I G+ EA+ L+++++ C+ T+
Sbjct: 89 IAFCAISEWRDLDYCTNILFNTRNPNTFSWNVAIRGFLDSENPREAVVLYKRVLQCDGTK 148
Query: 205 PSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASK 264
P T + A + ++ I G+ GF + DI V N +I CG + A K
Sbjct: 149 PDNYTYPLLFKACARLSLIRMGSEILGHVLHLGFDS-DIFVSNAVIHLLVSCGDLDGARK 207
Query: 265 LFE-----DI----------------------SVERKNLVSWTSIISGFAMHGM------ 291
+F+ D+ S+ K +VSWT+++ G+A G+
Sbjct: 208 MFDKSCVRDLVSWNSMINGYCGNLESARKLFDSMTNKTMVSWTTMVVGYAQSGLLDMAWK 267
Query: 292 -------------------------GKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGL 326
GKEA+ F MQ + + P+ VT +S L+ACS G
Sbjct: 268 LFDEMPDKDVVPWNAMIGGYVHANRGKEALALFNEMQAMNINPDEVTMVSCLSACSQLGA 327
Query: 327 VEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTL 386
++ G+ + +E+ E+ ++ LIDM + G++ +A + +P + + W +
Sbjct: 328 LDVGI-WIHHYIEKHELSLNVALGTALIDMYAKCGKITKAIQVFQELPGR--NSLTWTAI 384
Query: 387 LGACSFHGNV 396
+ + HGN
Sbjct: 385 ISGLALHGNA 394
>gi|147799543|emb|CAN68467.1| hypothetical protein VITISV_029899 [Vitis vinifera]
Length = 613
Score = 285 bits (729), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 160/424 (37%), Positives = 255/424 (60%), Gaps = 27/424 (6%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+NTL+ S + P A L++ ++ + S P + FT+ + + C G
Sbjct: 56 YNTLIRALSESNDPCDALLVF--IEMVEDCSVEP-----NCFTFPSVFKACGRAERLREG 108
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLF---------DEMPER------ 138
Q+H + K G S +V + +V MY+S G ++D+ +LF D + ++
Sbjct: 109 RQVHGLAVKFGLDSDEFVVSNVVRMYLSCGVMEDAHRLFYRRVFVDGCDGIRDKKRRVDG 168
Query: 139 NLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMV 198
++V WNVMI G V+ GELE AR+LF+EMP R+VVSW +I GY + EA+ +FR+M
Sbjct: 169 DVVLWNVMIDGYVRIGELEVARNLFDEMPQRSVVSWNVMIAGYAQSGHFKEAVEVFREMQ 228
Query: 199 ACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGC 258
E P+ +T+++VLPA+ + G ++ + +H Y + D+ + + LID YAKCG
Sbjct: 229 MAE-VPPNYVTLVSVLPAMSRLGALELGKWVHLYAVRNNIGVDDV-LGSALIDMYAKCGS 286
Query: 259 IFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVL 318
I A ++FE + ++N+V+W++II+G AMHG K+ +++F M++ G+ P+ VT++ +L
Sbjct: 287 IEKALQVFEGLP--KRNVVTWSTIIAGLAMHGRAKDTLDHFEDMERAGVMPSDVTYIGLL 344
Query: 319 NACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEIT 378
+ACSH GLV EG FFD MV + P I+HYGC++D+LGRAG LE++E+ L +P +
Sbjct: 345 SACSHAGLVNEGRWFFDHMVRVSGLEPRIEHYGCMVDLLGRAGLLEESEELILNMPIKPD 404
Query: 379 DVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRR 438
D V+W+ LLGAC HGNVEMG+RV ++E+ G YV + NI A +G + ++R
Sbjct: 405 D-VIWKALLGACKMHGNVEMGKRVAEHLMELAPHDSGSYVALSNIYASLGNWEGVAKVRL 463
Query: 439 VMDE 442
+M E
Sbjct: 464 MMKE 467
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 124/288 (43%), Gaps = 50/288 (17%)
Query: 155 ELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVL 214
+L++AR +F M N S+ +I + N +AL +F +MV EP+ T +V
Sbjct: 37 DLDYARKIFRSMHRPNCFSYNTLIRALSESNDPCDALLVFIEMVEDCSVEPNCFTFPSVF 96
Query: 215 PAIWQNGDVKSCQLIHGYGEKRGFTAF--------------------------------- 241
A + ++ + +HG K G +
Sbjct: 97 KACGRAERLREGRQVHGLAVKFGLDSDEFVVSNVVRMYLSCGVMEDAHRLFYRRVFVDGC 156
Query: 242 ------------DIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMH 289
D+ + N +ID Y + G + A LF+++ ++++VSW +I+G+A
Sbjct: 157 DGIRDKKRRVDGDVVLWNVMIDGYVRIGELEVARNLFDEMP--QRSVVSWNVMIAGYAQS 214
Query: 290 GMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKH 349
G KEAVE F MQ + PN VT +SVL A S G +E G V + D+
Sbjct: 215 GHFKEAVEVFREMQMAEVPPNYVTLVSVLPAMSRLGALELGKWVHLYAVRNNIGVDDVLG 274
Query: 350 YGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVE 397
LIDM + G +E+A + G+P +VV W T++ + HG +
Sbjct: 275 -SALIDMYAKCGSIEKALQVFEGLPKR--NVVTWSTIIAGLAMHGRAK 319
>gi|449435340|ref|XP_004135453.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Cucumis sativus]
gi|449478665|ref|XP_004155385.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Cucumis sativus]
Length = 604
Score = 285 bits (729), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 167/452 (36%), Positives = 253/452 (55%), Gaps = 45/452 (9%)
Query: 4 LQNSQTPNNITTQI-HSHLLTTNSLLHHSQLFNTLLHFYSLAESPQKAFLLYKQLQQIYT 62
L N T N T+ + H+H L L LFN + Y+ + SP AF L+ +L
Sbjct: 67 LINFCTLNPTTSYMDHAHHLFDQILDKDIILFNIMARGYARSNSPYLAFSLFGELLC--- 123
Query: 63 HSHSPLPPLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSL 122
S L P D +T+S L++ CA+ G LH K+G ++Y+ L+NMY
Sbjct: 124 ---SGLLP--DDYTFSSLLKACASSKALREGMGLHCFAVKLGLNHNIYICPTLINMYAEC 178
Query: 123 GFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYT 182
+ + +FDEM E PC +VS+ II GY
Sbjct: 179 NDMNAARGVFDEM-----------------------------EQPC--IVSYNAIITGYA 207
Query: 183 RMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFD 242
R ++ NEAL+LFR++ A EP+++T+L+V+ + G + + IH Y +K+GF +
Sbjct: 208 RSSQPNEALSLFRELQASN-IEPTDVTMLSVIMSCALLGALDLGKWIHEYVKKKGFDKY- 265
Query: 243 IRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRM 302
++V LID +AKCG + A +FE + V ++ +W+++I FA HG G +A+ F M
Sbjct: 266 VKVNTALIDMFAKCGSLTDAISIFEGMRV--RDTQAWSAMIVAFATHGDGLKAISMFEEM 323
Query: 303 QKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGR 362
++ G++P+ +TFL +L ACSH GLVE+G +F M + + P IKHYGC++D+LGRAG
Sbjct: 324 KREGVRPDEITFLGLLYACSHAGLVEQGRGYFYSMSKTYGITPGIKHYGCMVDLLGRAGH 383
Query: 363 LEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYN 422
L++A + + T ++WRTLL ACS HGNVEM +RV +I E++ +GGDYV++ N
Sbjct: 384 LDEAYNFVDKLEIKATP-ILWRTLLSACSTHGNVEMAKRVIERIFELDDAHGGDYVILSN 442
Query: 423 ILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
+ A VGR+ D LR++M +R KVPGCS V
Sbjct: 443 LYARVGRWEDVNHLRKLMKDRGVVKVPGCSSV 474
>gi|356577724|ref|XP_003556973.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g56310-like [Glycine max]
Length = 549
Score = 285 bits (729), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 163/414 (39%), Positives = 243/414 (58%), Gaps = 15/414 (3%)
Query: 44 AESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKV 103
+ +P +A L+ ++ + +PP DS+++ F+++ LS ++G Q+H
Sbjct: 105 SSNPTRAISLFNAIRLL------GMPP--DSYSFPFVLKAVVCLSAVHVGKQIHCQAIVS 156
Query: 104 GFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLF 163
G SH V T+LV MY S L + KLFD ++ WN M+ G K G + AR+LF
Sbjct: 157 GLDSHPSVVTSLVQMYSSCAHLSSARKLFDGATFKHAPLWNAMLAGYAKVGNMSNARNLF 216
Query: 164 EEMP--CRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNG 221
E MP R+VVSWT +I GYT+ + NEA+ LFR M+ + +P EI ILAVL A G
Sbjct: 217 ECMPEKDRDVVSWTTLISGYTQTHSPNEAITLFRIML-LQNVQPDEIAILAVLSACADLG 275
Query: 222 DVKSCQLIHGYGEKRGFTAFD-IRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWT 280
++ + IH Y EK + + N LID YAK G I A +LF+++ + K +++WT
Sbjct: 276 ALQLGEWIHNYIEKHNNKLRKTVPLCNSLIDMYAKSGDISKARQLFQNM--KHKTIITWT 333
Query: 281 SIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEE 340
++ISG A+HG GKEA++ F M+K +KPN VT ++VL+ACSH GLVE G N F M +
Sbjct: 334 TVISGLALHGFGKEALDVFSCMEKARVKPNEVTLIAVLSACSHVGLVELGRNIFTSMRSK 393
Query: 341 CEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGE 400
+ P I+HYGC+ID+LGRAG L++A + +PSE + VW +LL A + +G+ +
Sbjct: 394 YGIEPKIEHYGCMIDLLGRAGYLQEAMELVRVMPSE-ANAAVWGSLLSASNRYGDAALAA 452
Query: 401 RVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
R + +E G+Y L+ N A +G + +A +R+VM + A KVPG S V
Sbjct: 453 EALRHLSVLEPHNCGNYSLLSNTYAALGWWKEAAMVRKVMRDTCAEKVPGVSFV 506
>gi|19071652|gb|AAL84319.1|AC073556_36 putative pentatricopeptide repeat containing protein [Oryza sativa
Japonica Group]
Length = 545
Score = 285 bits (729), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 160/454 (35%), Positives = 253/454 (55%), Gaps = 40/454 (8%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNL 92
++NTL+ + +P+ A LY ++ + + P D T+ F++R C + +
Sbjct: 75 MYNTLIRGAAHTAAPRDAVSLYTRM--LRRGGGGGVRP--DKLTFPFVLRACTAMGAGDT 130
Query: 93 GTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSS----------------------- 129
G Q+HA + K G +S +V AL+ M+ S G L ++
Sbjct: 131 GVQVHAHVVKAGCESDAFVKNALIGMHASCGNLGIAAALFDGRAREDAVAWSAMITGCAR 190
Query: 130 --------KLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGY 181
LFDE P ++LV+WNVMIT K G++ AR LF+++P R+VVSW +I GY
Sbjct: 191 RGDIGAARDLFDECPVKDLVSWNVMITAYAKRGDMALARELFDQVPERDVVSWNVMISGY 250
Query: 182 TRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHG-YGEKRGFTA 240
R AL LF +M +P +T+L++L A +GD+ Q +H +
Sbjct: 251 VRCGSHLHALELFEQMQRMG-EKPDIVTMLSLLSACADSGDLDVGQRLHSSLSDMFSRNG 309
Query: 241 FDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFG 300
F + + N LID YAKCG + SA ++F S+ K++ +W SI+ G A+HG E+++ F
Sbjct: 310 FPVVLGNALIDMYAKCGSMKSAHEVF--WSMRDKDVSTWNSIVGGLALHGHVLESIDMFE 367
Query: 301 RMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRA 360
+M K ++P+ +TF++VL ACSHGG+V++G FF+ M + V P+IKHYGC++DMLGRA
Sbjct: 368 KMLKGKVRPDEITFVAVLIACSHGGMVDKGREFFNLMQHKYRVEPNIKHYGCMVDMLGRA 427
Query: 361 GRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLM 420
G L++A + + E + V+WRTLL AC HG +E+ + R++L+ GDYVL+
Sbjct: 428 GLLKEAFEFIDTMKCE-PNSVIWRTLLSACRVHGEIELAKHANRQLLKARNDESGDYVLL 486
Query: 421 YNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
NI A VG + +E++R++MD+ K G + V
Sbjct: 487 SNIYASVGEWFGSEKMRKLMDDSGVNKEAGQTFV 520
>gi|224082560|ref|XP_002306741.1| predicted protein [Populus trichocarpa]
gi|222856190|gb|EEE93737.1| predicted protein [Populus trichocarpa]
Length = 509
Score = 285 bits (728), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 152/422 (36%), Positives = 247/422 (58%), Gaps = 11/422 (2%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNL 92
++NT++ +S + +P A L+ + ++T S + P TY + + A L +
Sbjct: 62 VWNTIIRGFSQSSTPHNAISLF--IDMMFT-SPTTQP---QRLTYPSVFKAYAQLGLAHE 115
Query: 93 GTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVK 152
G QLH + K+G ++ ++ ++NMYV+ GFL ++ ++FD ++VTWN MI GL K
Sbjct: 116 GAQLHGRVIKLGLENDQFIQNTILNMYVNCGFLGEAQRIFDGATGFDVVTWNTMIIGLAK 175
Query: 153 WGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILA 212
GE++ +R LF++M RN VSW +I GY R R EA+ LF +M E +PSE T+++
Sbjct: 176 CGEIDKSRRLFDKMLLRNTVSWNSMISGYVRKGRFFEAMELFSRMQE-EGIKPSEFTMVS 234
Query: 213 VLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVE 272
+L A G ++ + IH Y K F A + V+ +ID Y+KCG I A ++F+ S
Sbjct: 235 LLNACACLGALRQGEWIHDYIVKNNF-ALNSIVITAIIDMYSKCGSIDKALQVFK--SAP 291
Query: 273 RKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLN 332
+K L W S+I G AM G G EAV F +++ LKP+ V+F+ VL AC+H G+V+ +
Sbjct: 292 KKGLSCWNSLILGLAMSGRGNEAVRLFSKLESSNLKPDHVSFIGVLTACNHAGMVDRAKD 351
Query: 333 FFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSF 392
+F M E ++ P IKHY C++D+LGRAG LE+AE+ +P D ++W +LL +C
Sbjct: 352 YFLLMSETYKIEPSIKHYSCMVDVLGRAGLLEEAEELIKSMPVN-PDAIIWGSLLSSCRE 410
Query: 393 HGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCS 452
+GN+EM ++ +++ E++ ++L+ N+ A F +A R + E+ K PGCS
Sbjct: 411 YGNIEMAKQAAKRVNELDPNESSSFILLSNVYAAHNHFEEAIEQRLSLKEKQMDKEPGCS 470
Query: 453 LV 454
L+
Sbjct: 471 LI 472
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 89/353 (25%), Positives = 155/353 (43%), Gaps = 26/353 (7%)
Query: 95 QLHAVISKVGFQSHVYVNTALVNMYVS-LGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
++HA + K G + ++ S G + + +F ++ NL WN +I G +
Sbjct: 14 KIHAQLIKTGLAKDTIAASRVLAFCTSPAGDINYAYLVFTQIRNPNLFVWNTIIRGFSQS 73
Query: 154 GELEFARSLFEEM--------PCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEP 205
A SLF +M P R +++ + Y ++ ++E L +++ E
Sbjct: 74 STPHNAISLFIDMMFTSPTTQPQR--LTYPSVFKAYAQLGLAHEGAQLHGRVIKLGL-EN 130
Query: 206 SEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKL 265
+ +L G + Q I G T FD+ N +I AKCG I + +L
Sbjct: 131 DQFIQNTILNMYVNCGFLGEAQRIFD-----GATGFDVVTWNTMIIGLAKCGEIDKSRRL 185
Query: 266 FEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGG 325
F+ + + +N VSW S+ISG+ G EA+E F RMQ+ G+KP+ T +S+LNAC+ G
Sbjct: 186 FDKMLL--RNTVSWNSMISGYVRKGRFFEAMELFSRMQEEGIKPSEFTMVSLLNACACLG 243
Query: 326 LVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRT 385
+ +G D +V+ L I +IDM + G +++A + P + + W +
Sbjct: 244 ALRQGEWIHDYIVKNNFALNSIV-ITAIIDMYSKCGSIDKALQVFKSAPKK--GLSCWNS 300
Query: 386 LLGACSFHGNVEMGERVTRKILEMERG-YGGDYVLMYNILAGVGRFGDAERLR 437
L+ + G G R ++E D+V +L G +R +
Sbjct: 301 LILGLAMSGR---GNEAVRLFSKLESSNLKPDHVSFIGVLTACNHAGMVDRAK 350
>gi|225434622|ref|XP_002279360.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 743
Score = 285 bits (728), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 149/421 (35%), Positives = 246/421 (58%), Gaps = 12/421 (2%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+N+++ + P++A L+++++ T + P + T ++ CA S G
Sbjct: 205 WNSMITAFVQGGCPEEALELFQEME---TQNVKP-----NGITMVGVLSACAKKSDFEFG 256
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
+H+ I + + ++ A+++MY G ++D+ +LFD+MPE+++V+W M+ G K
Sbjct: 257 RWVHSYIERNRIGESLTLSNAMLDMYTKCGSVEDAKRLFDKMPEKDIVSWTTMLVGYAKI 316
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
GE + A+ +F+ MP +++ +W +I Y + + EAL LF ++ + +P E+T+++
Sbjct: 317 GEYDAAQGIFDAMPNQDIAAWNALISAYEQCGKPKEALELFHELQLSKTAKPDEVTLVST 376
Query: 214 LPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVER 273
L A Q G + IH Y +K+G + + LID Y KCG + A +F SVER
Sbjct: 377 LSACAQLGAMDLGGWIHVYIKKQGMK-LNCHLTTSLIDMYCKCGDLQKALMVFH--SVER 433
Query: 274 KNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNF 333
K++ W+++I+G AMHG GK+A+ F +MQ+ +KPN VTF ++L ACSH GLVEEG F
Sbjct: 434 KDVFVWSAMIAGLAMHGHGKDAIALFSKMQEDKVKPNAVTFTNILCACSHVGLVEEGRTF 493
Query: 334 FDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFH 393
F++M VLP +KHY C++D+LGRAG LE+A + +P VW LLGAC+ H
Sbjct: 494 FNQMELVYGVLPGVKHYACMVDILGRAGLLEEAVELIEKMPMAPA-ASVWGALLGACTIH 552
Query: 394 GNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSL 453
NV + E+ +++E+E G G YVL+ NI A G++ LR++M + K PGCS
Sbjct: 553 ENVVLAEQACSQLIELEPGNHGAYVLLSNIYAKAGKWDRVSGLRKLMRDVGLKKEPGCSS 612
Query: 454 V 454
+
Sbjct: 613 I 613
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 111/441 (25%), Positives = 191/441 (43%), Gaps = 79/441 (17%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+NTL+ Y+ + +P ++ L++ ++ H P D FT+ FLI+ + L G
Sbjct: 103 WNTLIRAYASSSNPHQSLLIFLRM----LHQSPDFP---DKFTFPFLIKAASELEELFTG 155
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
H ++ KV S V++ +L++ Y G L ++F +P R++V+WN MIT V+
Sbjct: 156 KAFHGMVIKVLLGSDVFILNSLIHFYAKCGELGLGYRVFVNIPRRDVVSWNSMITAFVQG 215
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
G E A LF+EM +NV +P+ IT++ V
Sbjct: 216 GCPEEALELFQEMETQNV--------------------------------KPNGITMVGV 243
Query: 214 LPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVER 273
L A + D + + +H Y E R + + N ++D Y KCG + A +LF+ +
Sbjct: 244 LSACAKKSDFEFGRWVHSYIE-RNRIGESLTLSNAMLDMYTKCGSVEDAKRLFDKMP--E 300
Query: 274 KNLVSWTSIISGFA-------------------------------MHGMGKEAVENFGRM 302
K++VSWT+++ G+A G KEA+E F +
Sbjct: 301 KDIVSWTTMLVGYAKIGEYDAAQGIFDAMPNQDIAAWNALISAYEQCGKPKEALELFHEL 360
Query: 303 Q-KVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAG 361
Q KP+ VT +S L+AC+ G ++ G + +++ + + LIDM + G
Sbjct: 361 QLSKTAKPDEVTLVSTLSACAQLGAMDLG-GWIHVYIKKQGMKLNCHLTTSLIDMYCKCG 419
Query: 362 RLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMY 421
L++A + E DV VW ++ + HG+ + + K+ E + V
Sbjct: 420 DLQKALMVFHSV--ERKDVFVWSAMIAGLAMHGHGKDAIALFSKM--QEDKVKPNAVTFT 475
Query: 422 NILAGVGRFGDAERLRRVMDE 442
NIL G E R ++
Sbjct: 476 NILCACSHVGLVEEGRTFFNQ 496
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 73/298 (24%), Positives = 138/298 (46%), Gaps = 45/298 (15%)
Query: 95 QLHAVISKVG-----FQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITG 149
Q+HA + + G F + + A ++ + SL + + ++FD++P NL TWN +I
Sbjct: 53 QIHAQMLRTGLFFDPFSASRLITAAALSPFPSLDY---AQQVFDQIPHPNLYTWNTLIR- 108
Query: 150 LVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEIT 209
Y + +++L +F +M+ P + T
Sbjct: 109 ------------------------------AYASSSNPHQSLLIFLRMLHQSPDFPDKFT 138
Query: 210 ILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDI 269
++ A + ++ + + HG K D+ +LN LI YAKCG + ++F +
Sbjct: 139 FPFLIKAASELEELFTGKAFHGMVIKV-LLGSDVFILNSLIHFYAKCGELGLGYRVF--V 195
Query: 270 SVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEE 329
++ R+++VSW S+I+ F G +EA+E F M+ +KPN +T + VL+AC+ E
Sbjct: 196 NIPRRDVVSWNSMITAFVQGGCPEEALELFQEMETQNVKPNGITMVGVLSACAKKSDFEF 255
Query: 330 GLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLL 387
G + +E + + ++DM + G +E A++ +P + D+V W T+L
Sbjct: 256 G-RWVHSYIERNRIGESLTLSNAMLDMYTKCGSVEDAKRLFDKMPEK--DIVSWTTML 310
>gi|449454143|ref|XP_004144815.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09190-like [Cucumis sativus]
gi|449490933|ref|XP_004158752.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09190-like [Cucumis sativus]
Length = 484
Score = 285 bits (728), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 151/420 (35%), Positives = 251/420 (59%), Gaps = 12/420 (2%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNL 92
LFN+++ +SL+ ++ LL+ ++ +H +P D +T++ L+++CA L +L
Sbjct: 74 LFNSIIKAHSLSVPFHQSLLLFSSMK-----NHRIVP---DQYTFAPLLKSCANLCEYSL 125
Query: 93 GTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVK 152
G + + + + GF + +V +YV ++D+ K+FDEM R++V WN+MI G K
Sbjct: 126 GQCVISEVFRRGFYCFGSIRIGVVELYVCCEKMEDAWKMFDEMSHRDVVVWNLMIRGFCK 185
Query: 153 WGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILA 212
G ++F LF +M R++VSW II + R EAL LF++M + +P E+T++
Sbjct: 186 TGNVDFGLCLFRQMSERSLVSWNTIISCLAQNRRDVEALELFQQMEEHGF-KPDEVTVVT 244
Query: 213 VLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVE 272
+LP + G ++ Q IH Y +G V N LID Y KCG I A +F+ ++
Sbjct: 245 MLPVCSRLGALEVGQRIHSYASSKGNLVGITTVGNSLIDFYCKCGNIEKAYNIFQKMTC- 303
Query: 273 RKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLN 332
K++VSW +II GFA++G G+ A++ F M+K LKPN TF++VL AC H GL+E+G
Sbjct: 304 -KSVVSWNTIILGFALNGKGEFAIDLFMEMRKEYLKPNDATFVAVLTACVHSGLLEKGRE 362
Query: 333 FFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSF 392
F M E+ E+ P ++H+GC++D+LGR G +E+A K +P + + +W +LGAC
Sbjct: 363 LFSSMAEDYEIQPKLEHFGCMVDLLGRGGCVEEAHKLIKSMPMQ-PNATLWGAVLGACRT 421
Query: 393 HGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCS 452
HGN+++ E ++++ +E G+YVL+ N+LA GR+ + E +R+ M E++ K PG S
Sbjct: 422 HGNLKLAEMAVKELISLEPWNSGNYVLLSNMLAEEGRWEEVENVRQWMREKSVKKAPGQS 481
>gi|225470997|ref|XP_002266598.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic [Vitis vinifera]
gi|297742795|emb|CBI35475.3| unnamed protein product [Vitis vinifera]
Length = 517
Score = 284 bits (727), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 158/421 (37%), Positives = 235/421 (55%), Gaps = 12/421 (2%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+ L+ Y P KAF ++ L HS L P DSF + C + G
Sbjct: 71 WTCLISLYLHTSQPCKAFSIFSHL------FHSGLRP--DSFCVVGAVSACGHRKDLSNG 122
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
+H ++ + S V AL++MY G ++ + +F M +++ +W ++ G +K
Sbjct: 123 RIVHGMVFRFELGSDPIVGNALIDMYSRSGAIEVACSVFKTMEIKDVSSWTSLLNGFIKC 182
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
++E AR +F+EMP RN VSWT +I GY + L LF++M A P+ ITI+AV
Sbjct: 183 NDIEAARRIFDEMPMRNSVSWTAMITGYVQGEVPIPGLELFQEMRAEGKDWPTVITIVAV 242
Query: 214 LPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVER 273
L G +HGY K D+ V N L+D YAK G + A K+F+++ +
Sbjct: 243 LSGCADIGAFDLGSSVHGYVNKTNLD-LDVTVNNALMDMYAKSGALVLALKIFQEMP--K 299
Query: 274 KNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNF 333
+++ SWT++ISG A+HG G A+E F M K G+ PN VT LSVL+ACSH GLV EG +
Sbjct: 300 RDVFSWTTMISGLALHGKGTHALEAFSDMSKSGVVPNEVTLLSVLSACSHAGLVVEGRSL 359
Query: 334 FDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFH 393
F KMV+ + P I+HYGC++D+LGRAG L +A++ +P + D V+WR+LL AC H
Sbjct: 360 FQKMVQCHGIKPKIQHYGCMVDLLGRAGLLREAKELIEHMPIK-PDSVIWRSLLSACLVH 418
Query: 394 GNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSL 453
GN+ + E + I+E+E G Y+L++NI R+ DA + R+ M +R K PGCS
Sbjct: 419 GNLALAEMAGKMIIELEPDDDGVYILLWNIYCSASRWEDALKARKAMRDRRVKKKPGCSW 478
Query: 454 V 454
V
Sbjct: 479 V 479
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 77/352 (21%), Positives = 138/352 (39%), Gaps = 71/352 (20%)
Query: 76 TYSFLIRTCATLSHPNLGTQLHAVISKVGF--QSHVYVNTALVNMYVSLGFLKDSSKLFD 133
T+ FL++ C +L Q+H +G ++ L+N Y LG D+ K+F+
Sbjct: 5 TFYFLLQKCGSLEKLK---QIHGKAVTLGLLCSKRQHLACKLLNTYTQLGSPVDAQKVFN 61
Query: 134 EMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALAL 193
+ + +VSWT +I Y ++ +A ++
Sbjct: 62 HIQNPD-------------------------------IVSWTCLISLYLHTSQPCKAFSI 90
Query: 194 FRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTY 253
F + P ++ + A D+ + +++HG + + D V N LID Y
Sbjct: 91 FSHLFH-SGLRPDSFCVVGAVSACGHRKDLSNGRIVHGMVFRFELGS-DPIVGNALIDMY 148
Query: 254 AKCGCIFSASKLFE---------------------DISVER--------KNLVSWTSIIS 284
++ G I A +F+ DI R +N VSWT++I+
Sbjct: 149 SRSGAIEVACSVFKTMEIKDVSSWTSLLNGFIKCNDIEAARRIFDEMPMRNSVSWTAMIT 208
Query: 285 GFAMHGMGKEAVENFGRMQKVGLK-PNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEV 343
G+ + +E F M+ G P +T ++VL+ C+ G + G + V + +
Sbjct: 209 GYVQGEVPIPGLELFQEMRAEGKDWPTVITIVAVLSGCADIGAFDLG-SSVHGYVNKTNL 267
Query: 344 LPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGN 395
D+ L+DM ++G L A K +P DV W T++ + HG
Sbjct: 268 DLDVTVNNALMDMYAKSGALVLALKIFQEMPKR--DVFSWTTMISGLALHGK 317
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 81/183 (44%), Gaps = 6/183 (3%)
Query: 221 GDVKSCQLIHGYGEKRGFTAFDIRVLNC-LIDTYAKCGCIFSASKLFEDISVERKNLVSW 279
G ++ + IHG G + L C L++TY + G A K+F I + ++VSW
Sbjct: 14 GSLEKLKQIHGKAVTLGLLCSKRQHLACKLLNTYTQLGSPVDAQKVFNHI--QNPDIVSW 71
Query: 280 TSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVE 339
T +IS + +A F + GL+P+ + ++AC H + G MV
Sbjct: 72 TCLISLYLHTSQPCKAFSIFSHLFHSGLRPDSFCVVGAVSACGHRKDLSNG-RIVHGMVF 130
Query: 340 ECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMG 399
E+ D LIDM R+G +E A ++ EI DV W +LL ++E
Sbjct: 131 RFELGSDPIVGNALIDMYSRSGAIEVA--CSVFKTMEIKDVSSWTSLLNGFIKCNDIEAA 188
Query: 400 ERV 402
R+
Sbjct: 189 RRI 191
>gi|147791533|emb|CAN68456.1| hypothetical protein VITISV_025676 [Vitis vinifera]
Length = 768
Score = 284 bits (727), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 158/421 (37%), Positives = 234/421 (55%), Gaps = 12/421 (2%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+ L+ Y P KAF ++ L HS L P DSF + C + G
Sbjct: 322 WTCLISLYLHTSQPCKAFSIFSHL------FHSGLRP--DSFCVVGAVSACGHRKDLSNG 373
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
+H ++ + S V AL++MY G ++ + +F M +++ +W ++ G +K
Sbjct: 374 RIVHGMVFRFELGSDPIVGNALIDMYSRSGAIEVACSVFKTMEIKDVSSWTSLLNGFIKC 433
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
++E AR +F+EMP RN VSWT +I GY + L LF++M A P+ ITI+AV
Sbjct: 434 NDIEAARRIFDEMPMRNSVSWTAMITGYVQGEVPIPGLELFQEMRAEGKDWPTVITIVAV 493
Query: 214 LPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVER 273
L G +HGY K D+ V N L+D YAK G + A K+F+++ +
Sbjct: 494 LSGCADIGAFDLGSSVHGYVNKTNLD-LDVTVNNALMDMYAKSGALVLALKIFQEMP--K 550
Query: 274 KNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNF 333
+++ SWT++ISG A+HG G A+E F M K G PN VT LSVL+ACSH GLV EG +
Sbjct: 551 RDVFSWTTMISGLALHGKGTHALEAFSDMSKSGXXPNEVTLLSVLSACSHAGLVVEGRSL 610
Query: 334 FDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFH 393
F KMV+ + P I+HYGC++D+LGRAG L +A++ +P + D V+WR+LL AC H
Sbjct: 611 FQKMVQCHGIKPKIQHYGCMVDLLGRAGLLREAKELIEHMPIK-PDSVIWRSLLSACLVH 669
Query: 394 GNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSL 453
GN+ + E + I+E+E G Y+L++NI R+ DA + R+ M +R K PGCS
Sbjct: 670 GNLALAEMAGKMIIELEPDDDGVYILLWNIYCSASRWEDALKARKAMRDRRVKKKPGCSW 729
Query: 454 V 454
V
Sbjct: 730 V 730
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 78/352 (22%), Positives = 140/352 (39%), Gaps = 71/352 (20%)
Query: 76 TYSFLIRTCATLSHPNLGTQLHAVISKVGF--QSHVYVNTALVNMYVSLGFLKDSSKLFD 133
T+ FL++ C +L Q+H +G ++ L+N Y LG D+ K+F+
Sbjct: 256 TFYFLLQKCGSLEKLK---QIHGKAVTLGLLCSKRQHLACKLLNTYTQLGSPVDAQKVFN 312
Query: 134 EMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALAL 193
+ + P ++VSWT +I Y ++ +A ++
Sbjct: 313 HI-----------------------------QNP--DIVSWTCLISLYLHTSQPCKAFSI 341
Query: 194 FRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTY 253
F + P ++ + A D+ + +++HG + + D V N LID Y
Sbjct: 342 FSHLFHSGL-RPDSFCVVGAVSACGHRKDLSNGRIVHGMVFRFELGS-DPIVGNALIDMY 399
Query: 254 AKCGCIFSASKLFE---------------------DISVER--------KNLVSWTSIIS 284
++ G I A +F+ DI R +N VSWT++I+
Sbjct: 400 SRSGAIEVACSVFKTMEIKDVSSWTSLLNGFIKCNDIEAARRIFDEMPMRNSVSWTAMIT 459
Query: 285 GFAMHGMGKEAVENFGRMQKVGLK-PNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEV 343
G+ + +E F M+ G P +T ++VL+ C+ G + G + V + +
Sbjct: 460 GYVQGEVPIPGLELFQEMRAEGKDWPTVITIVAVLSGCADIGAFDLGSSVHG-YVNKTNL 518
Query: 344 LPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGN 395
D+ L+DM ++G L A K +P DV W T++ + HG
Sbjct: 519 DLDVTVNNALMDMYAKSGALVLALKIFQEMPKR--DVFSWTTMISGLALHGK 568
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 81/183 (44%), Gaps = 6/183 (3%)
Query: 221 GDVKSCQLIHGYGEKRGFTAFDIRVLNC-LIDTYAKCGCIFSASKLFEDISVERKNLVSW 279
G ++ + IHG G + L C L++TY + G A K+F I + ++VSW
Sbjct: 265 GSLEKLKQIHGKAVTLGLLCSKRQHLACKLLNTYTQLGSPVDAQKVFNHI--QNPDIVSW 322
Query: 280 TSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVE 339
T +IS + +A F + GL+P+ + ++AC H + G MV
Sbjct: 323 TCLISLYLHTSQPCKAFSIFSHLFHSGLRPDSFCVVGAVSACGHRKDLSNG-RIVHGMVF 381
Query: 340 ECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMG 399
E+ D LIDM R+G +E A ++ EI DV W +LL ++E
Sbjct: 382 RFELGSDPIVGNALIDMYSRSGAIEVA--CSVFKTMEIKDVSSWTSLLNGFIKCNDIEAA 439
Query: 400 ERV 402
R+
Sbjct: 440 RRI 442
>gi|359483655|ref|XP_003632994.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Vitis vinifera]
Length = 613
Score = 284 bits (727), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 164/446 (36%), Positives = 250/446 (56%), Gaps = 49/446 (10%)
Query: 9 TPNNITTQIHSHLLTTNSLLHHSQLFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPL 68
+P + QI S + N +NT++ Y+ +E+P A LY+Q+ S +
Sbjct: 88 SPMSYAHQIFSQIQNPNIFT-----WNTMIRGYAESENPMPALELYRQMHV------SCI 136
Query: 69 PPLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDS 128
P D+ TY FL++ A L G ++H++ + GF+S V+V LV+MY + G
Sbjct: 137 EP--DTHTYPFLLKAIAKLMDVREGEKVHSIAIRNGFESLVFVQNTLVHMYAACG----- 189
Query: 129 SKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSN 188
E A LFE M RN+V+W +I+GY R N
Sbjct: 190 --------------------------HAESAHKLFELMAERNLVTWNSVINGYALNGRPN 223
Query: 189 EALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNC 248
EAL LFR+M EP T++++L A + G + + H Y K G ++ N
Sbjct: 224 EALTLFREM-GLRGVEPDGFTMVSLLSACAELGALALGRRAHVYMVKVGLDG-NLHAGNA 281
Query: 249 LIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLK 308
L+D YAKCG I A K+F+++ E K++VSWTS+I G A++G GKEA+E F +++ GL
Sbjct: 282 LLDLYAKCGSIRQAHKVFDEM--EEKSVVSWTSLIVGLAVNGFGKEALELFKELERKGLM 339
Query: 309 PNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEK 368
P+ +TF+ VL ACSH G+V+EG ++F +M EE ++P I+HYGC++D+LGRAG ++QA +
Sbjct: 340 PSEITFVGVLYACSHCGMVDEGFDYFKRMKEEYGIVPKIEHYGCMVDLLGRAGLVKQAHE 399
Query: 369 TALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVG 428
+P + + VVWRTLLGAC+ HG++ +GE ++L++E + GDYVL+ N+ A
Sbjct: 400 FIQNMPMQ-PNAVVWRTLLGACTIHGHLALGEVARAQLLQLEPKHSGDYVLLSNLYASEQ 458
Query: 429 RFGDAERLRRVMDERNAFKVPGCSLV 454
R+ D ++RR M K PG SLV
Sbjct: 459 RWSDVHKVRRTMLREGVKKTPGHSLV 484
>gi|225450551|ref|XP_002277430.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 500
Score = 284 bits (726), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 148/429 (34%), Positives = 254/429 (59%), Gaps = 14/429 (3%)
Query: 28 LHH--SQLFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCA 85
+HH + L+NT+ Y+ + +P A LL++ + + H P P D++T+ FL++ C+
Sbjct: 48 IHHPSTYLYNTMFRVYAASPTPLHALLLHRHMLR-----HGPPP---DTYTFPFLLKACS 99
Query: 86 TLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNV 145
L+H G +LH K G HV+V +L+++Y S + + ++FD M R++ +W
Sbjct: 100 ALAHLPKGQELHCQALKFGLGGHVFVENSLIHLYGSNSGMDSARRVFDGMGYRDIASWTT 159
Query: 146 MITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEP 205
++ ++ AR +F+EMP R+V+S++ +I Y R NR EAL LFR++ + + EP
Sbjct: 160 LLACYANSCSVKAARKVFDEMPERSVISYSAMIAAYVRGNRFREALDLFRELFSVK-IEP 218
Query: 206 SEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKL 265
S+ +++VL A G + + ++ Y + D R+ LID + KCG I A +
Sbjct: 219 SDSCVMSVLCACANLGALDVGRWVYSYVCQSKGDYVDSRIATALIDMFFKCGSIEHALLV 278
Query: 266 FEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGG 325
FE + K++ WT+++SG AMHG+G++ +E F +M G+KPN VTF+++L+ CSH G
Sbjct: 279 FE--GAKEKHVGEWTAMLSGLAMHGLGEQLIEAFEKMVDSGVKPNGVTFVALLSGCSHSG 336
Query: 326 LVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRT 385
LV EGL +FD+M + V P ++H+GC++D+LGRAG ++QA + +P E + +W +
Sbjct: 337 LVNEGLYYFDRMESDFGVEPTVEHFGCVVDLLGRAGLIDQAMQLISEMPFE-PNAAIWGS 395
Query: 386 LLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNA 445
LL AC + NVE+GE + +++ E G Y+ + ++ GR+ + E+++ M E
Sbjct: 396 LLNACRVYKNVEIGELAAQWLIKDEPWNGALYMTLLSLYREAGRWDEVEKVKLKMKEVGC 455
Query: 446 FKVPGCSLV 454
K PGCSL+
Sbjct: 456 RKGPGCSLI 464
>gi|108706388|gb|ABF94183.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
Length = 823
Score = 284 bits (726), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 157/442 (35%), Positives = 249/442 (56%), Gaps = 40/442 (9%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNL 92
++NTL+ + +P+ A LY ++ + + P D T+ F++R C + +
Sbjct: 45 MYNTLIRGAAHTAAPRDAVSLYTRM--LRRGGGGGVRP--DKLTFPFVLRACTAMGAGDT 100
Query: 93 GTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSS----------------------- 129
G Q+HA + K G +S +V AL+ M+ S G L ++
Sbjct: 101 GVQVHAHVVKAGCESDAFVKNALIGMHASCGNLGIAAALFDGRAREDAVAWSAMITGCAR 160
Query: 130 --------KLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGY 181
LFDE P ++LV+WNVMIT K G++ AR LF+++P R+VVSW +I GY
Sbjct: 161 RGDIGAARDLFDECPVKDLVSWNVMITAYAKRGDMALARELFDQVPERDVVSWNVMISGY 220
Query: 182 TRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHG-YGEKRGFTA 240
R AL LF +M +P +T+L++L A +GD+ Q +H +
Sbjct: 221 VRCGSHLHALELFEQMQRMG-EKPDIVTMLSLLSACADSGDLDVGQRLHSSLSDMFSRNG 279
Query: 241 FDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFG 300
F + + N LID YAKCG + SA ++F S+ K++ +W SI+ G A+HG E+++ F
Sbjct: 280 FPVVLGNALIDMYAKCGSMKSAHEVF--WSMRDKDVSTWNSIVGGLALHGHVLESIDMFE 337
Query: 301 RMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRA 360
+M K ++P+ +TF++VL ACSHGG+V++G FF+ M + V P+IKHYGC++DMLGRA
Sbjct: 338 KMLKGKVRPDEITFVAVLIACSHGGMVDKGREFFNLMQHKYRVEPNIKHYGCMVDMLGRA 397
Query: 361 GRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLM 420
G L++A + + E + V+WRTLL AC HG +E+ + R++L+ GDYVL+
Sbjct: 398 GLLKEAFEFIDTMKCE-PNSVIWRTLLSACRVHGEIELAKHANRQLLKARNDESGDYVLL 456
Query: 421 YNILAGVGRFGDAERLRRVMDE 442
NI A VG + +E++R++MD+
Sbjct: 457 SNIYASVGEWFGSEKMRKLMDD 478
>gi|297738897|emb|CBI28142.3| unnamed protein product [Vitis vinifera]
Length = 571
Score = 283 bits (725), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 164/459 (35%), Positives = 253/459 (55%), Gaps = 74/459 (16%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNL 92
++N ++ ++ S +KA LL++QL++ SP D+FTY F+ + L
Sbjct: 99 IYNLVIKAFTKNGSFRKAVLLFRQLRE---EGLSP-----DNFTYPFVFKAIGCLGEVRE 150
Query: 93 GTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVK 152
G +++ + K G + YV +L++MY +G +++ ++F+EMP+R++V+WNV+I+G VK
Sbjct: 151 GEKVYGFVVKSGLEFDTYVCNSLMDMYAEVGRVQNLRQVFEEMPQRDVVSWNVLISGYVK 210
Query: 153 -------------------------W----------GELEFARSLFEEMPCRNVVSWTGI 177
W G+L+ AR LFE P R+VV WT +
Sbjct: 211 CRRYEDAVDVFRQIFNDMPIKTVICWTSMVSGYVNCGQLDEARELFERSPVRDVVLWTAM 270
Query: 178 IDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRG 237
I+GY + NR ++A+ALFR+M + P T++A+L
Sbjct: 271 INGYVQFNRFDDAVALFREM-QIKRVSPDRFTLVALLT---------------------- 307
Query: 238 FTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVE 297
D V LI+ YAKCG I + ++F ++ K+ SWTSII G AM+G +A+E
Sbjct: 308 ----DAVVGTALIEMYAKCGFIEKSLEIFN--GLKEKDTASWTSIICGLAMNGKTSKALE 361
Query: 298 NFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDML 357
F M + G+KP+ +TF+ VL+ACSHGGLVEEG F M ++ P ++HYGCLID+L
Sbjct: 362 LFAEMVQTGVKPDDITFIGVLSACSHGGLVEEGRKHFRSMTAVYQIEPKLEHYGCLIDLL 421
Query: 358 GRAGRLEQAEKTALGIPSEITDVVV--WRTLLGACSFHGNVEMGERVTRKILEMERGYGG 415
GRAG+L++AE+ P+ +V+V + LL AC HGNVEMGERV ++++ +E G
Sbjct: 422 GRAGQLDEAEELIEKSPNVNNEVIVPLYGALLSACRTHGNVEMGERVAKRLVGIESGDSS 481
Query: 416 DYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
+ L+ NI A R+ D ++RR M + KVPGCS V
Sbjct: 482 VHTLLANIYASADRWEDVTKVRRKMKDLGVKKVPGCSSV 520
Score = 41.6 bits (96), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 61/140 (43%), Gaps = 9/140 (6%)
Query: 252 TYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNR 311
T G + A ++F I + L + +I F +G ++AV F ++++ GL P+
Sbjct: 75 TDPSIGNLHYAERIFNYIDI--PGLFIYNLVIKAFTKNGSFRKAVLLFRQLREEGLSPDN 132
Query: 312 VTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGC--LIDMLGRAGRLEQAEKT 369
T+ V A G V EG + +V+ + Y C L+DM GR++ +
Sbjct: 133 FTYPFVFKAIGCLGEVREGEKVYGFVVKSG---LEFDTYVCNSLMDMYAEVGRVQNLRQV 189
Query: 370 ALGIPSEITDVVVWRTLLGA 389
+P DVV W L+
Sbjct: 190 FEEMPQR--DVVSWNVLISG 207
>gi|297798134|ref|XP_002866951.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312787|gb|EFH43210.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 630
Score = 283 bits (725), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 156/423 (36%), Positives = 247/423 (58%), Gaps = 17/423 (4%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNL 92
LF ++ S+ +AFLLY QL S + P + FT+S ++++C+T S
Sbjct: 95 LFTAAINTASINGLKDQAFLLYVQLLS------SQINP--NEFTFSSILKSCSTKS---- 142
Query: 93 GTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVK 152
G +H + K G YV T LV++Y G + + K+FD MPER+LV+ MIT K
Sbjct: 143 GKLIHTHVLKFGLGLDPYVATGLVDIYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAK 202
Query: 153 WGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILA 212
G +E AR+LF+ M R++VSW +IDGY++ ++AL LF+K++A +P EIT++A
Sbjct: 203 QGNVEAARALFDRMCERDIVSWNVMIDGYSQHGFPSDALMLFQKLLADGKPKPDEITVVA 262
Query: 213 VLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVE 272
L A Q G +++ + IH + +++V LID Y+KCG + A +F D
Sbjct: 263 ALSACSQIGALETGRWIHVFVNSSRIR-LNVKVCTALIDMYSKCGSLEEAVLVFND--TP 319
Query: 273 RKNLVSWTSIISGFAMHGMGKEAVENFGRMQKV-GLKPNRVTFLSVLNACSHGGLVEEGL 331
RK++V+W ++I+G+AMHG ++A+ F MQ + GL+P +TF+ L AC+H GLV EG+
Sbjct: 320 RKDIVAWNAMITGYAMHGYSQDALRLFDEMQGITGLQPTDITFIGTLQACAHAGLVNEGI 379
Query: 332 NFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACS 391
F+ M +E + P I+HYGCL+ +LGRAG+L++A + + E D V+W ++LG+C
Sbjct: 380 QIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYEIIKNMNME-ADSVLWSSVLGSCK 438
Query: 392 FHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGC 451
HG +G+ + ++ G YVL+ NI A VG + ++R +M E+ K PG
Sbjct: 439 LHGEFMLGKEIAEYLIGQNISNSGIYVLLSNIYALVGDYEGVAKVRNLMKEKGIVKEPGI 498
Query: 452 SLV 454
S +
Sbjct: 499 STI 501
>gi|356498282|ref|XP_003517982.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Glycine max]
Length = 609
Score = 283 bits (725), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 159/422 (37%), Positives = 242/422 (57%), Gaps = 44/422 (10%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNL 92
LFNT+ Y+ + P +A LL Q+ S L P D +T+S L++ CA L
Sbjct: 102 LFNTMARGYARFDDPLRAILLCSQVLC------SGLLP--DDYTFSSLLKACARLKALEE 153
Query: 93 GTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVK 152
G QLH + K+G ++YV L+NMY + + + ++FD++ E
Sbjct: 154 GKQLHCLAVKLGVGDNMYVCPTLINMYTACNDVDAARRVFDKIGE--------------- 198
Query: 153 WGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILA 212
PC VV++ II R +R NEALALFR++ +P+++T+L
Sbjct: 199 --------------PC--VVAYNAIITSCARNSRPNEALALFRELQE-SGLKPTDVTMLV 241
Query: 213 VLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVE 272
L + G + + IH Y +K GF + ++V LID YAKCG + A +F+D+
Sbjct: 242 ALSSCALLGALDLGRWIHEYVKKNGFDQY-VKVNTALIDMYAKCGSLDDAVSVFKDMP-- 298
Query: 273 RKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLN 332
R++ +W+++I +A HG G +A+ M+K ++P+ +TFL +L ACSH GLVEEG
Sbjct: 299 RRDTQAWSAMIVAYATHGHGSQAISMLREMKKAKVQPDEITFLGILYACSHTGLVEEGYE 358
Query: 333 FFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSF 392
+F M E ++P IKHYGC+ID+LGRAGRLE+A K +P + T ++WRTLL +CS
Sbjct: 359 YFHSMTHEYGIVPSIKHYGCMIDLLGRAGRLEEACKFIDELPIKPTP-ILWRTLLSSCSS 417
Query: 393 HGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCS 452
HGNVEM + V ++I E++ +GGDYV++ N+ A GR+ D LR++M ++ A KVPGCS
Sbjct: 418 HGNVEMAKLVIQRIFELDDSHGGDYVILSNLCARNGRWDDVNHLRKMMVDKGALKVPGCS 477
Query: 453 LV 454
+
Sbjct: 478 SI 479
>gi|357441857|ref|XP_003591206.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355480254|gb|AES61457.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 490
Score = 283 bits (725), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 162/483 (33%), Positives = 263/483 (54%), Gaps = 44/483 (9%)
Query: 1 MHILQNSQTPNNITTQIHSHLLTTNSLLHHSQLFNTLLHFYSLAESPQKAFLLYKQLQQI 60
+H+L N++T ++ QIH+H L LHHS L HF S+ S + I
Sbjct: 13 LHLLHNTKTQTHLP-QIHAHFLRHG--LHHSN--QILSHFVSVCTSLHQ----IPYATTI 63
Query: 61 YTHSHSP--------------LPP-----------------LFDSFTYSFLIRTCATLSH 89
+ H+H P PP L D+FT+ L++ + L
Sbjct: 64 FNHTHHPNILLFNSIIKAHSSFPPFHQSFHFFNLMKMTHNILPDNFTFPPLLKATSYLRD 123
Query: 90 PNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITG 149
+LG LHA ++ +GF H V L+ +Y + G ++D++K+FDEM R +V WN+MI G
Sbjct: 124 YDLGQCLHAHVTALGFYRHSPVEIGLLEVYSNCGKMEDANKVFDEMLHREVVVWNIMING 183
Query: 150 LVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEIT 209
K G+LE LF+ M R+VVSW +I + + EA +FR+M+ + EP + T
Sbjct: 184 FCKMGDLEIGLKLFKRMGQRSVVSWNLMISCLAQRKKDGEAFGIFREMLEQGF-EPDDAT 242
Query: 210 ILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDI 269
++ VLP + GDV + + IH Y + +G I V N L+D Y KCG + +A K+F ++
Sbjct: 243 LVTVLPVCARLGDVDAGEWIHSYADGKGLLRKVISVGNSLVDFYCKCGNLEAAWKVFNEM 302
Query: 270 SVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEE 329
+ +KN+VSW ++ISG ++G G+ VE F +M + G+ P+ TF+ VL C+H G V++
Sbjct: 303 T--KKNVVSWNAMISGLGLNGKGELGVELFEKMARKGVTPSDSTFVGVLACCAHAGFVDK 360
Query: 330 GLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGA 389
G FD M + ++ P ++HYGC++D+LGR G +++A +P + + +W LL A
Sbjct: 361 GREIFDSMTVKFKLSPKLEHYGCVVDLLGRCGHVKEAYDLIRNMPL-MPNAALWGALLSA 419
Query: 390 CSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVP 449
C HG+ E+ E ++++ +E G G+YVL+ N+ A ++ + E++R +M K P
Sbjct: 420 CRTHGDREVAEIAAKELVRLEPGNSGNYVLLSNVYAEERKWNEVEKVRVLMQGVGIKKNP 479
Query: 450 GCS 452
G S
Sbjct: 480 GQS 482
>gi|356545826|ref|XP_003541335.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Glycine max]
Length = 607
Score = 283 bits (724), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 157/425 (36%), Positives = 243/425 (57%), Gaps = 18/425 (4%)
Query: 33 LFNTLLH-FYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPN 91
L+NTL F+SL+++P + L Y + Q H +P ++FT+ LIR C
Sbjct: 69 LYNTLFKAFFSLSQTPSLSLLFYSHMLQ---HCVTP-----NAFTFPSLIRACKLEEE-- 118
Query: 92 LGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLV 151
QLHA + K GF Y L+++Y + G L D+ ++F M + N+V+W +++G
Sbjct: 119 -AKQLHAHVLKFGFGGDTYALNNLIHVYFAFGSLDDARRVFCTMSDPNVVSWTSLVSGYS 177
Query: 152 KWGELEFARSLFEEMPCR-NVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITI 210
+WG ++ A +FE MPC+ N VSW +I + + NR EA ALFR+M + E
Sbjct: 178 QWGLVDEAFRVFELMPCKKNSVSWNAMIACFVKGNRFREAFALFRRMRVEKKMELDRFVA 237
Query: 211 LAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDIS 270
+L A G ++ IH Y EK G D ++ +ID Y KCGC+ A +F +
Sbjct: 238 ATMLSACTGVGALEQGMWIHKYVEKTGIV-LDSKLATTIIDMYCKCGCLDKAFHVFCGLK 296
Query: 271 VERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGL-KPNRVTFLSVLNACSHGGLVEE 329
V+R + SW +I GFAMHG G++A+ F M++ + P+ +TF++VL AC+H GLVEE
Sbjct: 297 VKR--VSSWNCMIGGFAMHGKGEDAIRLFKEMEEEAMVAPDSITFVNVLTACAHSGLVEE 354
Query: 330 GLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGA 389
G +F MV+ + P +HYGC++D+L RAGRLE+A+K +P D V LLGA
Sbjct: 355 GWYYFRYMVDVHGIDPTKEHYGCMVDLLARAGRLEEAKKVIDEMPMS-PDAAVLGALLGA 413
Query: 390 CSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVP 449
C HGN+E+GE V +++E++ G YV++ N+ A G++ +R++MD+R K P
Sbjct: 414 CRIHGNLELGEEVGNRVIELDPENSGRYVILGNMYASCGKWEQVAGVRKLMDDRGVKKEP 473
Query: 450 GCSLV 454
G S++
Sbjct: 474 GFSMI 478
>gi|224129622|ref|XP_002328762.1| predicted protein [Populus trichocarpa]
gi|222839060|gb|EEE77411.1| predicted protein [Populus trichocarpa]
Length = 632
Score = 283 bits (724), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 151/438 (34%), Positives = 247/438 (56%), Gaps = 36/438 (8%)
Query: 17 IHSHLLTTNSLLHHSQLFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFT 76
+HS LL TNS+L LLY + Q +S LP ++FT
Sbjct: 99 LHSQLLPTNSIL-----------------------LLYSHMLQ-----NSVLP---NNFT 127
Query: 77 YSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMP 136
+ L+ C + H G Q+HA + K GF +H +L++MYV+ L+++ ++F +P
Sbjct: 128 FPSLLIACRKIQH---GMQIHAHLFKFGFGAHSVCLNSLIHMYVTFQALEEARRVFHTIP 184
Query: 137 ERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRK 196
+ V+W +I+G KWG ++ A ++F+ MP +N SW ++ Y + NR +EA ALF +
Sbjct: 185 HPDSVSWTSLISGYSKWGLIDEAFTIFQLMPQKNSASWNAMMAAYVQTNRFHEAFALFDR 244
Query: 197 MVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKC 256
M A + +L A G + + IH Y ++ G D ++ ++D Y KC
Sbjct: 245 MKAENNNVLDKFVATTMLSACTGLGALDQGKWIHEYIKRNGIE-LDSKLTTAIVDMYCKC 303
Query: 257 GCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLS 316
GC+ A ++F + + + + SW +I G AMHG G+ A++ F M++ + P+ +TFL+
Sbjct: 304 GCLEKALQVFHSLPLPCRWISSWNCMIGGLAMHGNGEAAIQLFKEMERQRVAPDDITFLN 363
Query: 317 VLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSE 376
+L AC+H GLVEEG N+F M+ + P ++H+GC++D+LGRAG + +A K +P
Sbjct: 364 LLTACAHSGLVEEGRNYFSYMIRVYGIEPRMEHFGCMVDLLGRAGMVPEARKLIDEMPVS 423
Query: 377 ITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERL 436
DV V TLLGAC H N+E+GE + R+++E+E G YVL+ N+ A G++ DA ++
Sbjct: 424 -PDVTVLGTLLGACKKHRNIELGEEIGRRVIELEPNNSGRYVLLANLYANAGKWEDAAKV 482
Query: 437 RRVMDERNAFKVPGCSLV 454
R++MD+R K PG S++
Sbjct: 483 RKLMDDRGVKKAPGFSMI 500
>gi|449442687|ref|XP_004139112.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Cucumis sativus]
Length = 681
Score = 283 bits (724), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 155/419 (36%), Positives = 242/419 (57%), Gaps = 13/419 (3%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+N++++ Y +AF LY ++ ++ + +P D T ++ A L + LG
Sbjct: 224 WNSIINGYVRCGLADEAFDLYYKMGEL-----NVMP---DEVTMIGVVSASAQLENLALG 275
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
+LH I ++G V + AL++MY+ ++ + LF+ M ++ +V+W M+ G K+
Sbjct: 276 RKLHQSIEEMGLNLTVPLANALMDMYIKCKNIEAAKILFENMTKKTVVSWTTMVIGYAKF 335
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
G LE A LF EMP ++VV W +I G+ + RS EALALF +M A P +IT++
Sbjct: 336 GLLESAVRLFNEMPEKDVVLWNALIGGFVQAKRSKEALALFHEMQASS-VAPDKITVVNC 394
Query: 214 LPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVER 273
L A Q G + +H Y +K T ++ + L+D YAKCG I A ++FE++
Sbjct: 395 LSACSQLGALDVGIWMHHYVDKHNLT-MNVALGTALVDMYAKCGNIKKAIQVFEEMP--G 451
Query: 274 KNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNF 333
+N ++WT+II G A+HG A+ F M +GL P+ +TF+ VL+AC HGGLV++G ++
Sbjct: 452 RNSLTWTAIICGLALHGQPHAAISYFSEMISIGLVPDEITFIGVLSACCHGGLVDQGRDY 511
Query: 334 FDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFH 393
F +M + + P +KHY CL+D+LGRAG LE+AE+ +P E D VVW L H
Sbjct: 512 FYQMTSKYGISPKLKHYSCLVDLLGRAGFLEEAEELIRSMPFE-PDAVVWGALFFGSRIH 570
Query: 394 GNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCS 452
GNV MGER K+LE++ GG YVL+ N+ + A ++R++M+ER K PGCS
Sbjct: 571 GNVHMGERAASKLLELDPHDGGIYVLLANMYGDANMWEQARKVRKMMEERGVEKTPGCS 629
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 94/364 (25%), Positives = 182/364 (50%), Gaps = 20/364 (5%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+N + Y +E+P A LLY+ + + S +P D++TY L + CA S
Sbjct: 122 WNMAIRGYVESENPINAVLLYRNMLR----KGSAIP---DNYTYPLLFKVCAGFSLSWTA 174
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
++ + ++GF S ++V+ A++++ VS G L + KLFDE R+LV+WN +I G V+
Sbjct: 175 NEILGHVIQLGFDSDLFVHNAIIHVLVSCGELLAARKLFDESCVRDLVSWNSIINGYVRC 234
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITIL-- 211
G + A L+ +M NV+ + G + E LAL RK+ +T+
Sbjct: 235 GLADEAFDLYYKMGELNVMPDEVTMIGVVSASAQLENLALGRKLHQSIEEMGLNLTVPLA 294
Query: 212 -AVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDIS 270
A++ + ++++ +++ K+ ++ V+ YAK G + SA +LF ++
Sbjct: 295 NALMDMYIKCKNIEAAKILFENMTKKTVVSWTTMVIG-----YAKFGLLESAVRLFNEMP 349
Query: 271 VERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEG 330
K++V W ++I GF KEA+ F MQ + P+++T ++ L+ACS G ++ G
Sbjct: 350 --EKDVVLWNALIGGFVQAKRSKEALALFHEMQASSVAPDKITVVNCLSACSQLGALDVG 407
Query: 331 LNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGAC 390
+ + V++ + ++ L+DM + G +++A + +P + + W ++
Sbjct: 408 I-WMHHYVDKHNLTMNVALGTALVDMYAKCGNIKKAIQVFEEMPGR--NSLTWTAIICGL 464
Query: 391 SFHG 394
+ HG
Sbjct: 465 ALHG 468
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 74/302 (24%), Positives = 135/302 (44%), Gaps = 27/302 (8%)
Query: 145 VMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKM------V 198
V + +W L++ + NV SW I GY A+ L+R M +
Sbjct: 93 VAFCAISEWRNLDYCDKILNNAANLNVFSWNMAIRGYVESENPINAVLLYRNMLRKGSAI 152
Query: 199 ACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGC 258
YT P + A W + I G+ + GF + D+ V N +I CG
Sbjct: 153 PDNYTYPLLFKVCAGFSLSWTANE------ILGHVIQLGFDS-DLFVHNAIIHVLVSCGE 205
Query: 259 IFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVL 318
+ +A KLF++ V ++LVSW SII+G+ G+ EA + + +M ++ + P+ VT + V+
Sbjct: 206 LLAARKLFDESCV--RDLVSWNSIINGYVRCGLADEAFDLYYKMGELNVMPDEVTMIGVV 263
Query: 319 NACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEIT 378
+A + + G + +EE + + L+DM + +E A+ + +
Sbjct: 264 SASAQLENLALGRK-LHQSIEEMGLNLTVPLANALMDMYIKCKNIEAAKILFENMTKKT- 321
Query: 379 DVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRR 438
VV W T++ + G +E R+ ++ E + V+++N L +G F A+R +
Sbjct: 322 -VVSWTTMVIGYAKFGLLESAVRLFNEMPEKD-------VVLWNAL--IGGFVQAKRSKE 371
Query: 439 VM 440
+
Sbjct: 372 AL 373
>gi|449476227|ref|XP_004154678.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g22410, mitochondrial-like [Cucumis sativus]
Length = 681
Score = 283 bits (723), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 155/419 (36%), Positives = 242/419 (57%), Gaps = 13/419 (3%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+N++++ Y +AF LY ++ ++ + +P D T ++ A L + LG
Sbjct: 224 WNSIINGYVRCGLADEAFDLYYKMGEL-----NVMP---DEVTMIGVVSASAQLENLALG 275
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
+LH I ++G V + AL++MY+ ++ + LF+ M ++ +V+W M+ G K+
Sbjct: 276 RKLHQSIEEMGLNLTVPLANALMDMYIKCKNIEAAKILFENMTKKTVVSWTTMVIGYAKF 335
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
G LE A LF EMP ++VV W +I G+ + RS EALALF +M A P +IT++
Sbjct: 336 GLLESAVRLFNEMPEKDVVLWNALIGGFVQAKRSKEALALFHEMQASS-VAPDKITVVNC 394
Query: 214 LPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVER 273
L A Q G + +H Y +K T ++ + L+D YAKCG I A ++FE++
Sbjct: 395 LSACSQLGALDVGIWMHHYVDKHNLT-MNVALGTALVDMYAKCGNIKKAIQVFEEMP--G 451
Query: 274 KNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNF 333
+N ++WT+II G A+HG A+ F M +GL P+ +TF+ VL+AC HGGLV++G ++
Sbjct: 452 RNSLTWTAIICGLALHGQPHAAISYFSEMISIGLVPDEITFIGVLSACCHGGLVDQGRDY 511
Query: 334 FDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFH 393
F +M + + P +KHY CL+D+LGRAG LE+AE+ +P E D VVW L H
Sbjct: 512 FYQMTSKYGISPKLKHYSCLVDLLGRAGFLEEAEELIRSMPFE-PDAVVWGALFFGSRIH 570
Query: 394 GNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCS 452
GNV MGER K+LE++ GG YVL+ N+ + A ++R++M+ER K PGCS
Sbjct: 571 GNVHMGERAASKLLELDPHDGGIYVLLANMYGDANMWEQARKVRKMMEERGVEKTPGCS 629
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 94/364 (25%), Positives = 182/364 (50%), Gaps = 20/364 (5%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+N + Y +E+P A LLY+ + + S +P D++TY L + CA S
Sbjct: 122 WNMAIRGYVESENPINAVLLYRNMLR----KGSAIP---DNYTYPLLFKVCAGFSLSWTA 174
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
++ + ++GF S ++V+ A++++ VS G L + KLFDE R+LV+WN +I G V+
Sbjct: 175 NEILGHVIQLGFDSDLFVHNAIIHVLVSCGELLAARKLFDESCVRDLVSWNSIINGYVRC 234
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITIL-- 211
G + A L+ +M NV+ + G + E LAL RK+ +T+
Sbjct: 235 GLADEAFDLYYKMGELNVMPDEVTMIGVVSASAQLENLALGRKLHQSIEEMGLNLTVPLA 294
Query: 212 -AVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDIS 270
A++ + ++++ +++ K+ ++ V+ YAK G + SA +LF ++
Sbjct: 295 NALMDMYIKCKNIEAAKILFENMTKKTVVSWTTMVIG-----YAKFGLLESAVRLFNEMP 349
Query: 271 VERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEG 330
K++V W ++I GF KEA+ F MQ + P+++T ++ L+ACS G ++ G
Sbjct: 350 --EKDVVLWNALIGGFVQAKRSKEALALFHEMQASSVAPDKITVVNCLSACSQLGALDVG 407
Query: 331 LNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGAC 390
+ + V++ + ++ L+DM + G +++A + +P + + W ++
Sbjct: 408 I-WMHHYVDKHNLTMNVALGTALVDMYAKCGNIKKAIQVFEEMPGR--NSLTWTAIICGL 464
Query: 391 SFHG 394
+ HG
Sbjct: 465 ALHG 468
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 134/302 (44%), Gaps = 27/302 (8%)
Query: 145 VMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKM------V 198
V + +W L++ + N SW I GY A+ L+R M +
Sbjct: 93 VAFCAISEWRNLDYCDKILNNAANLNXFSWNMAIRGYVESENPINAVLLYRNMLRKGSAI 152
Query: 199 ACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGC 258
YT P + A W + I G+ + GF + D+ V N +I CG
Sbjct: 153 PDNYTYPLLFKVCAGFSLSWTANE------ILGHVIQLGFDS-DLFVHNAIIHVLVSCGE 205
Query: 259 IFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVL 318
+ +A KLF++ V ++LVSW SII+G+ G+ EA + + +M ++ + P+ VT + V+
Sbjct: 206 LLAARKLFDESCV--RDLVSWNSIINGYVRCGLADEAFDLYYKMGELNVMPDEVTMIGVV 263
Query: 319 NACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEIT 378
+A + + G + +EE + + L+DM + +E A+ + +
Sbjct: 264 SASAQLENLALGRK-LHQSIEEMGLNLTVPLANALMDMYIKCKNIEAAKILFENMTKKT- 321
Query: 379 DVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRR 438
VV W T++ + G +E R+ ++ E + V+++N L +G F A+R +
Sbjct: 322 -VVSWTTMVIGYAKFGLLESAVRLFNEMPEKD-------VVLWNAL--IGGFVQAKRSKE 371
Query: 439 VM 440
+
Sbjct: 372 AL 373
>gi|449435966|ref|XP_004135765.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 666
Score = 283 bits (723), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 153/430 (35%), Positives = 235/430 (54%), Gaps = 35/430 (8%)
Query: 55 KQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTA 114
K + IY + + + FTY L + C+ G Q+H + K G S V++ +A
Sbjct: 113 KLFKAIYFYGRMVIDARPNKFTYPTLFKACSVAQAVQEGRQIHGHVVKHGIGSDVHIKSA 172
Query: 115 LVNMYVSLGFLKDSSK------------------------------LFDEMPERNLVTWN 144
++MY S G L+D+ K LF +MP +N+ +WN
Sbjct: 173 GIHMYASFGRLEDARKMFYSGESDVVCWNTMIDGYLKCGVLEAAKGLFAQMPVKNIGSWN 232
Query: 145 VMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTE 204
VMI GL K G L AR LF+EM R+ +SW+ ++DGY R EAL +F++M E T
Sbjct: 233 VMINGLAKGGNLGDARKLFDEMSERDEISWSSMVDGYISAGRYKEALEIFQQMQR-EETR 291
Query: 205 PSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASK 264
P + +VL A G + + +H Y KR D + L+D YAKCG + +
Sbjct: 292 PGRFILSSVLAACSNIGAIDQGRWVHAY-LKRNSIKLDAVLGTALLDMYAKCGRLDMGWE 350
Query: 265 LFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHG 324
+FE++ + + + +W ++I G A+HG ++A+E F ++Q+ +KPN +T + VL AC+H
Sbjct: 351 VFEEM--KEREIFTWNAMIGGLAIHGRAEDALELFSKLQEGRMKPNGITLVGVLTACAHA 408
Query: 325 GLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWR 384
G V++GL F M E V P+++HYGC++D+LGR+G +AE +P + + VW
Sbjct: 409 GFVDKGLRIFQTMREFYGVDPELEHYGCMVDLLGRSGLFSEAEDLINSMPMK-PNAAVWG 467
Query: 385 TLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERN 444
LLGAC HGN ++ ERV + +LE+E G YVL+ NI A VGRF D ++R++M +R
Sbjct: 468 ALLGACRIHGNFDLAERVGKILLELEPQNSGRYVLLSNIYAKVGRFDDVSKIRKLMKDRG 527
Query: 445 AFKVPGCSLV 454
VPG S+V
Sbjct: 528 IKTVPGVSIV 537
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 89/356 (25%), Positives = 150/356 (42%), Gaps = 58/356 (16%)
Query: 94 TQLHAVISKVG-FQSHVYVNTALVNMYVSLGF--LKDSSKLFDEMPERNLVTWNVMITGL 150
TQLH ++ + G FQ H YV+ AL+ Y + F + K+F +P N+ WN++I G
Sbjct: 50 TQLHGLVLRSGHFQDH-YVSGALLKCYANPHFSNFDFALKVFSSIPNPNVFIWNIVIKGC 108
Query: 151 VKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITI 210
++ +L A + M +ID R N+ VA E +I
Sbjct: 109 LENNKLFKAIYFYGRM----------VID--ARPNKFTYPTLFKACSVAQAVQEGRQIHG 156
Query: 211 LAVLPAIWQNGDVKSCQLIHGYGE-------KRGFTA--FDIRVLNCLIDTYAKCGCIFS 261
V I + +KS IH Y ++ F + D+ N +ID Y KCG + +
Sbjct: 157 HVVKHGIGSDVHIKSAG-IHMYASFGRLEDARKMFYSGESDVVCWNTMIDGYLKCGVLEA 215
Query: 262 ASKLFEDISVE-----------------------------RKNLVSWTSIISGFAMHGMG 292
A LF + V+ ++ +SW+S++ G+ G
Sbjct: 216 AKGLFAQMPVKNIGSWNVMINGLAKGGNLGDARKLFDEMSERDEISWSSMVDGYISAGRY 275
Query: 293 KEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGC 352
KEA+E F +MQ+ +P R SVL ACS+ G +++G + ++ + D
Sbjct: 276 KEALEIFQQMQREETRPGRFILSSVLAACSNIGAIDQG-RWVHAYLKRNSIKLDAVLGTA 334
Query: 353 LIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILE 408
L+DM + GRL+ + + ++ W ++G + HG E + K+ E
Sbjct: 335 LLDMYAKCGRLDMGWEVFEEMKER--EIFTWNAMIGGLAIHGRAEDALELFSKLQE 388
>gi|356528966|ref|XP_003533068.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Glycine max]
Length = 712
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 145/421 (34%), Positives = 252/421 (59%), Gaps = 13/421 (3%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+N +L Y+ + +K+ +L+ ++++ SP +S T ++ C+ L G
Sbjct: 176 WNIMLSGYNRVKQFKKSKMLFIEMEK---RGVSP-----NSVTLVLMLSACSKLKDLEGG 227
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
++ I+ + ++ + L++M+ + G + ++ +FD M R++++W ++TG
Sbjct: 228 KHIYKYINGGIVERNLILENVLIDMFAACGEMDEAQSVFDNMKNRDVISWTSIVTGFANI 287
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
G+++ AR F+++P R+ VSWT +IDGY RMNR EALALFR+M +P E T++++
Sbjct: 288 GQIDLARKYFDQIPERDYVSWTAMIDGYLRMNRFIEALALFREMQMSN-VKPDEFTMVSI 346
Query: 214 LPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVER 273
L A G ++ + + Y +K D V N LID Y KCG + A K+F+++
Sbjct: 347 LTACAHLGALELGEWVKTYIDKNSIKN-DTFVGNALIDMYFKCGNVGKAKKVFKEM--HH 403
Query: 274 KNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNF 333
K+ +WT++I G A++G G+EA+ F M + + P+ +T++ VL AC+H G+VE+G +F
Sbjct: 404 KDKFTWTAMIVGLAINGHGEEALAMFSNMIEASITPDEITYIGVLCACTHAGMVEKGQSF 463
Query: 334 FDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFH 393
F M + + P++ HYGC++D+LGRAGRLE+A + + +P + + +VW +LLGAC H
Sbjct: 464 FISMTMQHGIKPNVTHYGCMVDLLGRAGRLEEAHEVIVNMPVK-PNSIVWGSLLGACRVH 522
Query: 394 GNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSL 453
NV++ E ++ILE+E G YVL+ NI A R+ + ++R++M ER K PGCSL
Sbjct: 523 KNVQLAEMAAKQILELEPENGAVYVLLCNIYAACKRWENLRQVRKLMMERGIKKTPGCSL 582
Query: 454 V 454
+
Sbjct: 583 M 583
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 96/398 (24%), Positives = 174/398 (43%), Gaps = 81/398 (20%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNL 92
++NT++ YS PQ +Y + S + P D FT+ FL++
Sbjct: 74 IWNTMIKGYSRINHPQNGVSMYLLMLA------SNIKP--DRFTFPFLLKGFTRNMALQY 125
Query: 93 GTQL--HAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGL 150
G L HAV K GF S+++V A ++M+ + + K+FD +VTWN+M++G
Sbjct: 126 GKVLLNHAV--KHGFDSNLFVQKAFIHMFSLCRLVDLARKVFDMGDAWEVVTWNIMLSGY 183
Query: 151 VKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITI 210
+ + + ++ LF EM R V P+ +T+
Sbjct: 184 NRVKQFKKSKMLFIEMEKRGV--------------------------------SPNSVTL 211
Query: 211 LAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDIS 270
+ +L A + D++ + I+ Y G ++ + N LID +A CG + A +F+++
Sbjct: 212 VLMLSACSKLKDLEGGKHIYKYING-GIVERNLILENVLIDMFAACGEMDEAQSVFDNM- 269
Query: 271 VERKNLVSWTSIISGFAMHG-----------------------------MGK--EAVENF 299
+ ++++SWTSI++GFA G M + EA+ F
Sbjct: 270 -KNRDVISWTSIVTGFANIGQIDLARKYFDQIPERDYVSWTAMIDGYLRMNRFIEALALF 328
Query: 300 GRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGR 359
MQ +KP+ T +S+L AC+H G +E G + +++ + D LIDM +
Sbjct: 329 REMQMSNVKPDEFTMVSILTACAHLGALELG-EWVKTYIDKNSIKNDTFVGNALIDMYFK 387
Query: 360 AGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVE 397
G + +A+K + + D W ++ + +G+ E
Sbjct: 388 CGNVGKAKKVFKEMHHK--DKFTWTAMIVGLAINGHGE 423
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 143/298 (47%), Gaps = 24/298 (8%)
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
G++ +AR +F+ +P + W +I GY+R+N ++++ M+A +P T +
Sbjct: 55 GKMIYARQVFDAIPQPTLFIWNTMIKGYSRINHPQNGVSMYLLMLASN-IKPDRFTFPFL 113
Query: 214 LPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVER 273
L +N ++ +++ + K GF + ++ V I ++ C + A K+F+ +
Sbjct: 114 LKGFTRNMALQYGKVLLNHAVKHGFDS-NLFVQKAFIHMFSLCRLVDLARKVFD--MGDA 170
Query: 274 KNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNF 333
+V+W ++SG+ K++ F M+K G+ PN VT + +L+ACS +E G +
Sbjct: 171 WEVVTWNIMLSGYNRVKQFKKSKMLFIEMEKRGVSPNSVTLVLMLSACSKLKDLEGGKHI 230
Query: 334 FD----KMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGA 389
+ +VE +L ++ LIDM G +++A+ + + DV+ W +++
Sbjct: 231 YKYINGGIVERNLILENV-----LIDMFAACGEMDEAQSVFDNMKNR--DVISWTSIVTG 283
Query: 390 CSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAG---VGRFGDAERLRRVMDERN 444
+ G +++ + +I E DYV ++ G + RF +A L R M N
Sbjct: 284 FANIGQIDLARKYFDQIPER------DYVSWTAMIDGYLRMNRFIEALALFREMQMSN 335
>gi|356510957|ref|XP_003524199.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Glycine max]
Length = 617
Score = 282 bits (722), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 161/442 (36%), Positives = 251/442 (56%), Gaps = 16/442 (3%)
Query: 17 IHSHLLTTNSLLHHSQLF--NTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDS 74
+HS+ S LH F L+ Y+L +A Y +++ SP+ S
Sbjct: 58 LHSYPRLLFSQLHTPNPFAWTALIRAYALRGPLSQALSFYSSMRK---RRVSPI-----S 109
Query: 75 FTYSFLIRTCATLSHPNLGTQLHA-VISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFD 133
FT+S L CA + H LG QLHA + GF S +YVN A+++MYV G L+ + +FD
Sbjct: 110 FTFSALFSACAAVRHSALGAQLHAQTLLLGGFSSDLYVNNAVIDMYVKCGSLRCARMVFD 169
Query: 134 EMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALAL 193
EMPER++++W +I + G++ AR LF+ +P +++V+WT ++ GY + +AL +
Sbjct: 170 EMPERDVISWTGLIVAYTRIGDMRAARDLFDGLPVKDMVTWTAMVTGYAQNAMPMDALEV 229
Query: 194 FRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFD-IRVLNCLIDT 252
FR++ E E E+T++ V+ A Q G K I E GF D + V + LID
Sbjct: 230 FRRLRD-EGVEIDEVTLVGVISACAQLGASKYANWIRDIAESSGFGVGDNVLVGSALIDM 288
Query: 253 YAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRV 312
Y+KCG + A +F+ + +N+ S++S+I GFA+HG + A++ F M + G+KPN V
Sbjct: 289 YSKCGNVEEAYDVFK--GMRERNVFSYSSMIVGFAIHGRARAAIKLFYDMLETGVKPNHV 346
Query: 313 TFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALG 372
TF+ VL ACSH GLV++G F M + V P + Y C+ D+L RAG LE+A +
Sbjct: 347 TFVGVLTACSHAGLVDQGQQLFASMEKCYGVAPTAELYACMTDLLSRAGYLEKALQLVET 406
Query: 373 IPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGD 432
+P E +D VW LLGA HGN ++ E ++++ E+E G+Y+L+ N A GR+ D
Sbjct: 407 MPME-SDGAVWGALLGASHVHGNPDVAEIASKRLFELEPDNIGNYLLLSNTYASAGRWDD 465
Query: 433 AERLRRVMDERNAFKVPGCSLV 454
++R+++ E+N K PG S V
Sbjct: 466 VSKVRKLLREKNLKKNPGWSWV 487
>gi|222624265|gb|EEE58397.1| hypothetical protein OsJ_09562 [Oryza sativa Japonica Group]
Length = 523
Score = 282 bits (722), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 158/447 (35%), Positives = 250/447 (55%), Gaps = 40/447 (8%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNL 92
++NTL+ + +P+ A LY ++ + + P D T+ F++R C + +
Sbjct: 45 MYNTLIRGAAHTAAPRDAVSLYTRM--LRRGGGGGVRP--DKLTFPFVLRACTAMGAGDT 100
Query: 93 GTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSS----------------------- 129
G Q+HA + K G +S +V AL+ M+ S G L ++
Sbjct: 101 GVQVHAHVVKAGCESDAFVKNALIGMHASCGNLGIAAALFDGRAREDAVAWSAMITGCAR 160
Query: 130 --------KLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGY 181
LFDE P ++LV+WNVMIT K G++ AR LF+++P R+VVSW +I GY
Sbjct: 161 RGDIGAARDLFDECPVKDLVSWNVMITAYAKRGDMALARELFDQVPERDVVSWNVMISGY 220
Query: 182 TRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHG-YGEKRGFTA 240
R AL LF +M +P +T+L++L A +GD+ Q +H +
Sbjct: 221 VRCGSHLHALELFEQMQRMG-EKPDIVTMLSLLSACADSGDLDVGQRLHSSLSDMFSRNG 279
Query: 241 FDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFG 300
F + + N LID YAKCG + SA ++F S+ K++ +W SI+ G A+HG E+++ F
Sbjct: 280 FPVVLGNALIDMYAKCGSMKSAHEVF--WSMRDKDVSTWNSIVGGLALHGHVLESIDMFE 337
Query: 301 RMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRA 360
+M K ++P+ +TF++VL ACSHGG+V++G FF+ M + V P+IKHYGC++DMLGRA
Sbjct: 338 KMLKGKVRPDEITFVAVLIACSHGGMVDKGREFFNLMQHKYRVEPNIKHYGCMVDMLGRA 397
Query: 361 GRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLM 420
G L++A + + E + V+WRTLL AC HG +E+ + R++L+ GDYVL+
Sbjct: 398 GLLKEAFEFIDTMKCE-PNSVIWRTLLSACRVHGEIELAKHANRQLLKARNDESGDYVLL 456
Query: 421 YNILAGVGRFGDAERLRRVMDERNAFK 447
NI A VG + +E++R++MD+ K
Sbjct: 457 SNIYASVGEWFGSEKMRKLMDDSGVNK 483
>gi|218192167|gb|EEC74594.1| hypothetical protein OsI_10176 [Oryza sativa Indica Group]
Length = 523
Score = 282 bits (722), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 158/447 (35%), Positives = 250/447 (55%), Gaps = 40/447 (8%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNL 92
++NTL+ + +P+ A LY ++ + + P D T+ F++R C + +
Sbjct: 45 MYNTLIRGAAHTAAPRDAVSLYTRM--LRRGGGGGVRP--DKLTFPFVLRACTAMGAGDT 100
Query: 93 GTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSS----------------------- 129
G Q+HA + K G +S +V AL+ M+ S G L ++
Sbjct: 101 GVQVHAHVVKAGCESDAFVKNALIGMHASCGNLGIAAALFDGRAREDAVAWSAMITGCAR 160
Query: 130 --------KLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGY 181
LFDE P ++LV+WNVMIT K G++ AR LF+++P R+VVSW +I GY
Sbjct: 161 RGDIGAARDLFDECPVKDLVSWNVMITAYAKRGDMALARELFDQVPERDVVSWNVMISGY 220
Query: 182 TRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHG-YGEKRGFTA 240
R AL LF +M +P +T+L++L A +GD+ Q +H +
Sbjct: 221 VRCGSHLHALELFEQMQRMG-EKPDIVTMLSLLSACADSGDLDVGQRLHSSLSDMFSRNG 279
Query: 241 FDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFG 300
F + + N LID YAKCG + SA ++F S+ K++ +W SI+ G A+HG E+++ F
Sbjct: 280 FPVVLGNALIDMYAKCGSMKSAHEVF--WSMRDKDVSTWNSIVGGLALHGHVLESIDMFE 337
Query: 301 RMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRA 360
+M K ++P+ +TF++VL ACSHGG+V++G FF+ M + V P+IKHYGC++DMLGRA
Sbjct: 338 KMLKGKVRPDEITFVAVLIACSHGGMVDKGREFFNLMQHKYRVEPNIKHYGCIVDMLGRA 397
Query: 361 GRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLM 420
G L++A + + E + V+WRTLL AC HG +E+ + R++L+ GDYVL+
Sbjct: 398 GLLKEAFEFIDTMKCE-PNSVIWRTLLSACRVHGEIELAKHANRQLLKARNDESGDYVLL 456
Query: 421 YNILAGVGRFGDAERLRRVMDERNAFK 447
NI A VG + +E++R++MD+ K
Sbjct: 457 SNIYASVGEWFGSEKMRKLMDDSGVNK 483
>gi|359486044|ref|XP_002269662.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Vitis vinifera]
Length = 689
Score = 282 bits (722), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 145/385 (37%), Positives = 229/385 (59%), Gaps = 3/385 (0%)
Query: 71 LFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSK 130
L D+FT F++++CA LS +G +H +VG + YV +L++MYV G + D+ K
Sbjct: 178 LGDNFTLPFVLKSCADLSRVCMGRCVHGQGLRVGLEGDFYVGASLIDMYVKCGVIGDARK 237
Query: 131 LFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEA 190
LFD+M R++ +WN +I G +K GE+ A LFE M RN+VSWT +I GYT+ + +A
Sbjct: 238 LFDKMIVRDMASWNALIAGYMKEGEIGVAEDLFERMEHRNIVSWTAMISGYTQNGFAEQA 297
Query: 191 LALFRKMVA-CEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCL 249
L LF +M+ +P+ +TI++VLPA Q+ ++ + IH + G + V L
Sbjct: 298 LGLFDEMLQDGSEMKPNWVTIVSVLPACAQSAALERGRRIHDFANGIGLH-LNSSVQTAL 356
Query: 250 IDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKP 309
YAKC + A F+ I+ KNL++W ++I+ +A HG G EAV F M + G++P
Sbjct: 357 AGMYAKCYSLVEARCCFDMIAQNGKNLIAWNTMITAYASHGCGVEAVSIFENMLRAGVQP 416
Query: 310 NRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKT 369
+ VTF+ +L+ CSH GL++ GLN F+ M V P ++HY C++D+LGRAGRL +A++
Sbjct: 417 DAVTFMGLLSGCSHSGLIDAGLNHFNDMGTIHSVEPRVEHYACVVDLLGRAGRLVEAKEL 476
Query: 370 ALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGR 429
+P + VW LL AC H N+E+ E R++ +E G+YVL+ N+ A G
Sbjct: 477 ISQMPMQ-AGPSVWGALLAACRSHRNLEIAELAARRLFVLEPDNSGNYVLLSNLYAEAGM 535
Query: 430 FGDAERLRRVMDERNAFKVPGCSLV 454
+ + ++LR ++ + K PGCS +
Sbjct: 536 WEEVKKLRALLKYQGMKKSPGCSWI 560
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 107/447 (23%), Positives = 165/447 (36%), Gaps = 113/447 (25%)
Query: 3 ILQNSQT-PNNITTQIHSHLLTTNSLLHHSQLFNTLLHFYSLAESPQKAFL---LYKQLQ 58
+LQN Q+ + + + + + SLL H E K L L LQ
Sbjct: 9 VLQNPQSMQHGLRRPVSATIPPLKSLLSHPIPPPPAPPPPPSPECTPKPSLNLQLRILLQ 68
Query: 59 QIYTHSHSP--LPPLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALV 116
I H P P+F T I+ LG Q HA I G Q + ++ +V
Sbjct: 69 PILQHFPHPSSYAPIFQFLTRHNFIK---------LGQQAHAQIVLHGLQPNAFLAAKMV 119
Query: 117 NMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTG 176
MY S G L + +FD + + + +N +I + G E
Sbjct: 120 AMYASSGDLDSAVVVFDRIDNPSSLLYNSIIRAYTRHGXXXXXXXXLE------------ 167
Query: 177 IIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKR 236
Y RM+ F ++ +T P + A L + + +HG G +
Sbjct: 168 ---AYARMH--------FLGLLGDNFTLPFVLKSCADLSRVCMG------RCVHGQGLRV 210
Query: 237 GFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISV------------------------- 271
G D V LID Y KCG I A KLF+ + V
Sbjct: 211 GLEG-DFYVGASLIDMYVKCGVIGDARKLFDKMIVRDMASWNALIAGYMKEGEIGVAEDL 269
Query: 272 ----ERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVG--LKPNRVTFLSVLNACSHGG 325
E +N+VSWT++ISG+ +G ++A+ F M + G +KPN VT +SVL AC+
Sbjct: 270 FERMEHRNIVSWTAMISGYTQNGFAEQALGLFDEMLQDGSEMKPNWVTIVSVLPACAQSA 329
Query: 326 LVEEGLNFFD------------------KMVEECEVLPDIKHYGCLIDMLGRAGRLEQAE 367
+E G D M +C L + + C DM+ + G+
Sbjct: 330 ALERGRRIHDFANGIGLHLNSSVQTALAGMYAKCYSLVEAR---CCFDMIAQNGK----- 381
Query: 368 KTALGIPSEITDVVVWRTLLGACSFHG 394
+++ W T++ A + HG
Sbjct: 382 -----------NLIAWNTMITAYASHG 397
>gi|449526834|ref|XP_004170418.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 666
Score = 282 bits (721), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 153/430 (35%), Positives = 233/430 (54%), Gaps = 35/430 (8%)
Query: 55 KQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTA 114
K + IY + + + FTY L + C+ G Q+H + K G S V++ +A
Sbjct: 113 KLFKAIYFYGRMVIDARPNKFTYPTLFKACSVAQAVQEGRQIHGHVVKHGIGSDVHIKSA 172
Query: 115 LVNMYVSLGFLKDSSK------------------------------LFDEMPERNLVTWN 144
+ MY S G L+D+ K LF +MP +N+ +WN
Sbjct: 173 GIQMYASFGRLEDARKMFYSGESDVVCWNTMIDGYLKCGVLEAAKGLFAQMPVKNIGSWN 232
Query: 145 VMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTE 204
VMI GL K G L AR LF+EM R+ +SW+ ++DGY R EAL +F++M E T
Sbjct: 233 VMINGLAKGGNLGDARKLFDEMSERDEISWSSMVDGYISAGRYKEALEIFQQMQR-EETR 291
Query: 205 PSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASK 264
P + +VL A G + + +H Y KR D + L+D YAKCG + +
Sbjct: 292 PGRFILSSVLAACSNIGAIDQGRWVHAY-LKRNSIKLDAVLGTALLDMYAKCGRLDMGWE 350
Query: 265 LFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHG 324
+FE++ + + + +W ++I G A+HG ++A+E F ++Q+ +KPN +T + VL AC+H
Sbjct: 351 VFEEM--KEREIFTWNAMIGGLAIHGRAEDALELFSKLQEGRMKPNGITLVGVLTACAHA 408
Query: 325 GLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWR 384
G V++GL F M E V P+++HYGC++D+LGR+G +AE +P + + VW
Sbjct: 409 GFVDKGLRIFQTMREFYGVDPELEHYGCMVDLLGRSGLFSEAEDLINSMPMK-PNAAVWG 467
Query: 385 TLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERN 444
LLGAC HGN ++ ERV + +LE+E G YVL+ NI A VGRF D ++R++M R
Sbjct: 468 ALLGACRIHGNFDLAERVGKILLELEPQNSGRYVLLSNIYAKVGRFDDVSKIRKLMKNRG 527
Query: 445 AFKVPGCSLV 454
VPG S+V
Sbjct: 528 IKTVPGVSIV 537
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 89/355 (25%), Positives = 152/355 (42%), Gaps = 56/355 (15%)
Query: 94 TQLHAVISKVG-FQSHVYVNTALVNMYVSLGF--LKDSSKLFDEMPERNLVTWNVMITGL 150
TQLHA++ + G FQ H YV+ AL+ Y + F + K+F +P N+ WN++I G
Sbjct: 50 TQLHALVLRSGHFQDH-YVSGALLKCYANPHFSNFDFALKVFSSIPNPNVFIWNIVIKGC 108
Query: 151 VKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITI 210
++ +L A + M +ID R N+ VA E +I
Sbjct: 109 LENNKLFKAIYFYGRM----------VID--ARPNKFTYPTLFKACSVAQAVQEGRQIHG 156
Query: 211 LAVLPAIWQNGDVKSC--QLIHGYGE----KRGFTA--FDIRVLNCLIDTYAKCGCIFSA 262
V I + +KS Q+ +G ++ F + D+ N +ID Y KCG + +A
Sbjct: 157 HVVKHGIGSDVHIKSAGIQMYASFGRLEDARKMFYSGESDVVCWNTMIDGYLKCGVLEAA 216
Query: 263 SKLFEDISVE-----------------------------RKNLVSWTSIISGFAMHGMGK 293
LF + V+ ++ +SW+S++ G+ G K
Sbjct: 217 KGLFAQMPVKNIGSWNVMINGLAKGGNLGDARKLFDEMSERDEISWSSMVDGYISAGRYK 276
Query: 294 EAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCL 353
EA+E F +MQ+ +P R SVL ACS+ G +++G + ++ + D L
Sbjct: 277 EALEIFQQMQREETRPGRFILSSVLAACSNIGAIDQG-RWVHAYLKRNSIKLDAVLGTAL 335
Query: 354 IDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILE 408
+DM + GRL+ + + ++ W ++G + HG E + K+ E
Sbjct: 336 LDMYAKCGRLDMGWEVFEEMKER--EIFTWNAMIGGLAIHGRAEDALELFSKLQE 388
>gi|357113878|ref|XP_003558728.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g15300-like [Brachypodium distachyon]
Length = 532
Score = 282 bits (721), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 160/454 (35%), Positives = 252/454 (55%), Gaps = 40/454 (8%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNL 92
++NTL+ + +P+ A LY ++ + S + P D T+ F++R C +
Sbjct: 75 MYNTLIRGAAHTAAPRDAVSLYARMAR--RGSCGGVRP--DKITFPFVLRACTAMGAGGT 130
Query: 93 GTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSS----------------------- 129
G Q+HA + K G +S +V AL+ M+ S G L +S
Sbjct: 131 GAQVHAHVVKAGCESDAFVRNALIGMHASCGELGVASALFDGRAREDAVAWSAMITGCAR 190
Query: 130 --------KLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGY 181
KLFDE P ++ V+WNVMIT K GE+ AR LF +P R+VVSW +I G+
Sbjct: 191 RGDIVAARKLFDECPVKDHVSWNVMITAYAKRGEMAPARVLFNRIPERDVVSWNAMISGH 250
Query: 182 TRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHG-YGEKRGFTA 240
R A+ LF +M +P +T+L++L A +GD+ + +H E T
Sbjct: 251 VRCGSHVYAMELFEQMQRMG-QKPDVVTMLSLLSACADSGDIDVGRRLHSSLSEMFLRTG 309
Query: 241 FDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFG 300
F + + N LID YAKCG + SA ++F + K++ +W SII G A+HG E+++ F
Sbjct: 310 FTVILGNALIDMYAKCGSMKSALQVF--WVMRDKDVSTWNSIIGGLALHGHVLESIDVFK 367
Query: 301 RMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRA 360
+M K ++P+ +TF++VL ACSHGG+V++G +F+ M + P++KHYGC++DMLGRA
Sbjct: 368 KMLKEKVRPDEITFVAVLIACSHGGMVDKGREYFNLMQHHYRIEPNVKHYGCMVDMLGRA 427
Query: 361 GRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLM 420
G L++A + + E + V+WRTLLGAC HG +E+ E R++L+ GDYVL+
Sbjct: 428 GLLKEAFEFIDTMKVE-PNSVIWRTLLGACRVHGEIELAEHANRQLLKARNDESGDYVLL 486
Query: 421 YNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
NI A G + ++E++R++MD+ K G ++V
Sbjct: 487 SNIYASAGEWSESEKMRKLMDDSGVNKQAGRTVV 520
>gi|296085345|emb|CBI29077.3| unnamed protein product [Vitis vinifera]
Length = 671
Score = 281 bits (720), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 157/439 (35%), Positives = 253/439 (57%), Gaps = 18/439 (4%)
Query: 21 LLTTNSLLHHSQ-----LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSF 75
L ++ HH Q L+N+L+ S +++P +A LY + Q S L P D
Sbjct: 116 LAYAKTIFHHLQNPPPSLYNSLIRALSSSKTPLEALPLYHTMLQ------SGLKP--DHM 167
Query: 76 TYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEM 135
TY F+I+ C S G +H + K GF+ Y+ ++L+++Y + L + +LF+
Sbjct: 168 TYPFVIKACNESSVTWFGLLVHTHVVKSGFECDSYIVSSLIHLYANGKDLGAAKQLFNLC 227
Query: 136 PERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFR 195
R++V+WN MI G VK E+ AR +F+ M CR+V+SW +I+GY + NEALALF
Sbjct: 228 SARDVVSWNAMIDGYVKHVEMGHARMVFDRMVCRDVISWNTMINGYAICGKPNEALALFD 287
Query: 196 KMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAK 255
+M A +P+E T++++L A G + +H Y I V L+D YAK
Sbjct: 288 QMRAVG-VKPTEATVVSLLSACAHLGALDKGLHLHTYINDNRIEVNSI-VGTALVDMYAK 345
Query: 256 CGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFL 315
CG I A+++F ++E K++++W +II+G A+HG KEA + F M++ G++PN +TF+
Sbjct: 346 CGKISLATQVFN--AMESKDVLAWNTIIAGMAIHGNVKEAQQLFKEMKEAGVEPNDITFV 403
Query: 316 SVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPS 375
++L+ACSH G+V+EG D M + P ++HYGC+ID+L RAG LE+A + +P
Sbjct: 404 AILSACSHAGMVDEGQKLLDCMSSSYGIEPKVEHYGCVIDLLARAGFLEEAMELIGTMPM 463
Query: 376 EITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAER 435
E + LLG C HGN E+GE V ++++ ++ + G Y+L+ NI A ++ DA +
Sbjct: 464 EPNPSAL-GALLGGCRIHGNFELGEMVGKRLINLQPCHSGRYILLSNIYAAAKKWDDARK 522
Query: 436 LRRVMDERNAFKVPGCSLV 454
+R +M KVPG S++
Sbjct: 523 VRNLMKVNGISKVPGVSVI 541
>gi|242062638|ref|XP_002452608.1| hypothetical protein SORBIDRAFT_04g028970 [Sorghum bicolor]
gi|241932439|gb|EES05584.1| hypothetical protein SORBIDRAFT_04g028970 [Sorghum bicolor]
Length = 485
Score = 281 bits (720), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 153/363 (42%), Positives = 220/363 (60%), Gaps = 8/363 (2%)
Query: 95 QLHAVISKVGFQ---SHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLV 151
Q+HA++ K G S V V+T+L+ Y LG + D+ K+FD MP+R +VTWNV++ LV
Sbjct: 78 QIHALLVKSGVPRTVSDVQVSTSLIRAYARLGRVCDARKVFDGMPDRTVVTWNVLLDALV 137
Query: 152 KWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITIL 211
+ G+L+ A +F EMP RNVVSW II G+TR + EA+ LF +M P E T++
Sbjct: 138 RDGDLDAAWEVFVEMPQRNVVSWNTIIAGFTRNGWAQEAVDLFVEMTVAYGLAPDEATMV 197
Query: 212 AVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISV 271
+ A+ G + + HGY +R F+ D + LI Y +CG + +A F +SV
Sbjct: 198 GFVSAVRDIGLLGIGKSAHGYVLRREFS-LDGALGVALISMYTRCGSMGAAHSCF--LSV 254
Query: 272 ERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGL 331
KN+ WTS+I+GFA HG ++A+ F M++VG++PN VTF++VLNAC+HGGLV EG
Sbjct: 255 TTKNVEHWTSLIAGFAAHGQPEKALRLFAEMRRVGIEPNGVTFVAVLNACNHGGLVSEGF 314
Query: 332 NFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACS 391
+FD M + P I+HYGCL+D+LGRAG L++A A +P E V+W +LL AC
Sbjct: 315 KYFDLM-RSMGIRPMIQHYGCLVDLLGRAGFLKEAFNLASNLP-EDPGFVIWSSLLAACH 372
Query: 392 FHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGC 451
HG+VEM E K+ + + +G YVL+ N A ++ D R RR M+E K PG
Sbjct: 373 SHGDVEMAELTASKLADAKPSHGSSYVLLSNTYARAKQWEDLRRTRRRMEEHGVTKKPGL 432
Query: 452 SLV 454
S +
Sbjct: 433 SWI 435
>gi|356529920|ref|XP_003533534.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g15300-like [Glycine max]
Length = 555
Score = 281 bits (720), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 165/454 (36%), Positives = 246/454 (54%), Gaps = 47/454 (10%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNL 92
++NT + S + P A LY Q+ +H + P D+FT+ +++ C L N
Sbjct: 74 MWNTYIRGSSQSHDPVHAVALYAQM------THRSVKP--DNFTFPLVLKACTKLFWVNT 125
Query: 93 GTQLHAVISKVGFQSHVYVN-------------------------------TALVNMYVS 121
G+ +H + ++GF S+V V +AL+ Y
Sbjct: 126 GSVVHGRVFRLGFGSNVVVRNTLLVFHAKCGDLKVANDIFDDSDKGDVVAWSALIAGYAQ 185
Query: 122 LGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGY 181
G L + KLFDEMP+R+LV+WNVMIT K GE+E AR LF+E P ++VVSW ++ GY
Sbjct: 186 RGDLSVARKLFDEMPKRDLVSWNVMITAYTKHGEMECARRLFDEAPMKDVVSWNAMVGGY 245
Query: 182 TRMNRSNEALALFRKMVACEYTE-PSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTA 240
N + EAL LF +M CE E P E+T+L++L A GD + +H +
Sbjct: 246 VLHNLNQEALELFDEM--CEVGECPDEVTMLSLLSACADLGDXG--EKVHAKIMELNKGK 301
Query: 241 FDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFG 300
+ N L+D YAKCG I +F + K++VSW S+I G A HG +E++ F
Sbjct: 302 LSTLLGNALVDMYAKCGNIGKGVCVF--WLIRDKDMVSWNSVIGGLAFHGHAEESLGLFR 359
Query: 301 RMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRA 360
MQ+ + P+ +TF+ VL ACSH G V+EG +F M + ++ P+I+H GC++DML RA
Sbjct: 360 EMQRTKVCPDEITFVGVLAACSHTGNVDEGNRYFYLMKNKYKIEPNIRHCGCVVDMLARA 419
Query: 361 GRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLM 420
G L++A + E + +VWR+LLGAC HG+VE+ +R T ++L M GDYVL+
Sbjct: 420 GLLKEAFDFIASMKIE-PNAIVWRSLLGACKVHGDVELAKRATEQLLRMRVDQSGDYVLL 478
Query: 421 YNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
N+ A G + AE +R++MD+ K G S V
Sbjct: 479 SNVYASHGEWDGAENVRKLMDDNGVTKTRGSSFV 512
>gi|224134663|ref|XP_002327460.1| predicted protein [Populus trichocarpa]
gi|222836014|gb|EEE74435.1| predicted protein [Populus trichocarpa]
Length = 540
Score = 281 bits (720), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 154/449 (34%), Positives = 257/449 (57%), Gaps = 24/449 (5%)
Query: 17 IHSHLLTTNSLLHHSQLF-----------NTLLHFYSLAESPQKAFLLYKQLQQIYTHSH 65
+H+H +SL + +LF NT++ + +AF LYK + +
Sbjct: 52 LHAHSNARSSLFYAERLFLCLQNKSTFIWNTMMQAFVEKNEAVRAFSLYKHMLE-----S 106
Query: 66 SPLPPLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFL 125
+ LP ++FT+SF+IR C + + +G H + K G++S+ +V L+++Y + GF+
Sbjct: 107 NYLP---NNFTFSFVIRACIDVFNLQMGLCFHGQVVKFGWESYDFVQNGLIHLYANCGFM 163
Query: 126 KDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMN 185
+ +FD +R++VTW +I+G + G++ AR LF+ MP +N VSW +I GY R+
Sbjct: 164 DLARNMFDMSIKRDVVTWTCLISGYLNSGQVLIARELFDRMPEKNPVSWGALIAGYVRIG 223
Query: 186 RSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRV 245
EAL +F M + + +I+ L A G + + IH Y KR + D +
Sbjct: 224 FFKEALEVFYDMQVSGF-RLNRASIVGALTACAFLGALDQGRWIHAY-VKRHHMSLDRML 281
Query: 246 LNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKV 305
LID YAKCGCI A +F+++ + +++ ++T +ISG A H + A++ F RMQ
Sbjct: 282 GTALIDMYAKCGCIEMACSVFDEM--DDRDVYAFTCLISGLANHDKSEAAIDLFNRMQDE 339
Query: 306 GLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQ 365
G+ PN VTF+ VLNACS G+V+EGL F+ M + P I+HYGCL+D+LGRAG++E+
Sbjct: 340 GVVPNEVTFVCVLNACSRMGMVDEGLRIFESMSNRYVIEPQIQHYGCLVDLLGRAGKIEE 399
Query: 366 AEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILA 425
A++ +P + D LL AC HG+V++GE + +++ +GG +VL+ N+ A
Sbjct: 400 AKQVVREMPLQ-PDSYTLGALLDACRVHGDVQLGEEMVDSLVQRCLDHGGVHVLLSNMYA 458
Query: 426 GVGRFGDAERLRRVMDERNAFKVPGCSLV 454
++ DA ++R+ M+++N K+PGCS +
Sbjct: 459 SADKWEDASKIRKKMEDKNIRKLPGCSSI 487
>gi|449447707|ref|XP_004141609.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g33350-like [Cucumis sativus]
gi|449510706|ref|XP_004163739.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g33350-like [Cucumis sativus]
Length = 563
Score = 281 bits (720), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 154/433 (35%), Positives = 248/433 (57%), Gaps = 22/433 (5%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNL 92
L+ ++ Y+ P+ AFLLY+ + + + P ++F Y ++R+C + N
Sbjct: 109 LYTAMITAYASYPDPKAAFLLYRNMVR-----RGAIRP--NNFIYPHVLRSCPDVLGSNA 161
Query: 93 GTQLHAVISKVGFQSHVYVNTALVNMYVSLGF-LKDSSKLFDEMPERNLVTWNVMITGLV 151
+H + K GF + V TA+V+ Y + + ++FDEM ER +V+W MI+G
Sbjct: 162 TKMVHTQVLKSGFGGYPVVQTAIVDSYSRFSSDIGSARQMFDEMLERTVVSWTAMISGYA 221
Query: 152 KWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEY--------T 203
+ G + A LFE MP R+V +W +I G + EA+ LF++MV
Sbjct: 222 RLGNFDSAIELFESMPERDVPAWNALIAGCAQNGFFCEAIWLFKRMVLLALEGNNNDREN 281
Query: 204 EPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSAS 263
+P++ T+ + L A G + + IHGY K + D + N L+D Y KCG + A
Sbjct: 282 KPNKTTLGSALSACGHTGMLHLGKWIHGYVFKT-YPGQDSFISNALLDMYGKCGNLKVAR 340
Query: 264 KLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVG--LKPNRVTFLSVLNAC 321
++F+ I++ KNL SW S+I+ A+HG A++ F + G +KPN VTF+ VLNAC
Sbjct: 341 RVFDMITL--KNLTSWNSLINCLALHGHSGSAIDLFAELIHCGDGVKPNEVTFVGVLNAC 398
Query: 322 SHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVV 381
+HGGLVE+G ++F+ M + ++ P I+H+GCLID+LGRAGR E+A + G+ E D V
Sbjct: 399 THGGLVEKGYSYFEMMRRDYDIEPQIEHFGCLIDLLGRAGRFEEAMEVVRGMNIE-PDEV 457
Query: 382 VWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMD 441
VW +LL AC HG ++ E +K++EM+ GG +++ NI A G++ + ++RR++
Sbjct: 458 VWGSLLNACKIHGRSDLAEYSVKKLIEMDPKNGGYRIMLANIYAEFGKWDEVRKVRRLLK 517
Query: 442 ERNAFKVPGCSLV 454
E+NA+K PGCS +
Sbjct: 518 EKNAYKTPGCSWI 530
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 117/283 (41%), Gaps = 47/283 (16%)
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
+L +AR +F+ + NV +T +I Y A L+R MV P+ V
Sbjct: 90 ADLCYARYIFDNLTSPNVFLYTAMITAYASYPDPKAAFLLYRNMVRRGAIRPNNFIYPHV 149
Query: 214 LPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDT--------------------- 252
L + + +++H K GF + + V ++D+
Sbjct: 150 LRSCPDVLGSNATKMVHTQVLKSGFGGYPV-VQTAIVDSYSRFSSDIGSARQMFDEMLER 208
Query: 253 -----------YAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGR 301
YA+ G SA +LFE S+ +++ +W ++I+G A +G EA+ F R
Sbjct: 209 TVVSWTAMISGYARLGNFDSAIELFE--SMPERDVPAWNALIAGCAQNGFFCEAIWLFKR 266
Query: 302 MQKVGL---------KPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGC 352
M + L KPN+ T S L+AC H G++ G + V + D
Sbjct: 267 MVLLALEGNNNDRENKPNKTTLGSALSACGHTGMLHLG-KWIHGYVFKTYPGQDSFISNA 325
Query: 353 LIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGN 395
L+DM G+ G L+ A + I + ++ W +L+ + HG+
Sbjct: 326 LLDMYGKCGNLKVARRVFDMI--TLKNLTSWNSLINCLALHGH 366
>gi|296082284|emb|CBI21289.3| unnamed protein product [Vitis vinifera]
Length = 581
Score = 281 bits (719), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 153/379 (40%), Positives = 225/379 (59%), Gaps = 4/379 (1%)
Query: 76 TYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEM 135
T+ I++C+ L + G Q H GF+ ++V++ALV+MY G L+D+ LFDE+
Sbjct: 78 TFPCAIKSCSALLDLHSGRQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEI 137
Query: 136 PERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFR 195
RN+V+W MITG V+ + A +F+ M R+V+SW II Y + S E++ +F
Sbjct: 138 SHRNIVSWTSMITGYVQNDDAHRALRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFH 197
Query: 196 KMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAK 255
+MV + +T+ AVL A +G + + IH K G + ++ V +ID Y K
Sbjct: 198 RMVKDGEINYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLES-NVFVGTSIIDMYCK 256
Query: 256 CGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFL 315
CG + A K F+ + KN+ SW+++++G+ MHG KEA+E F M G+KPN +TF+
Sbjct: 257 CGKVEMARKAFD--RMREKNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYITFV 314
Query: 316 SVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPS 375
SVL ACSH GL+EEG ++F M E +V P ++HYGC++D+LGRAG L++A G+
Sbjct: 315 SVLAACSHAGLLEEGWHWFKAMSHEFDVEPGVEHYGCMVDLLGRAGYLKEAFDLIKGMKL 374
Query: 376 EITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAER 435
D VVW LLGAC H NV++GE RK+ E++ G YVL+ NI A GR+ D ER
Sbjct: 375 R-PDFVVWGALLGACRMHKNVDLGEISARKLFELDPKNCGYYVLLSNIYADAGRWEDVER 433
Query: 436 LRRVMDERNAFKVPGCSLV 454
+R +M K PG SLV
Sbjct: 434 MRILMKNSGLVKPPGFSLV 452
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 126/298 (42%), Gaps = 49/298 (16%)
Query: 170 NVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLI 229
NV SW +I R S EAL F M +P+ T + + D+ S +
Sbjct: 40 NVFSWNSVIAELARSGDSVEALRAFSSMRKLS-LKPNRSTFPCAIKSCSALLDLHSGRQA 98
Query: 230 HGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISG---- 285
H GF D+ V + L+D Y+KCG + A LF++IS +N+VSWTS+I+G
Sbjct: 99 HQQALIFGFEP-DLFVSSALVDMYSKCGELRDARTLFDEIS--HRNIVSWTSMITGYVQN 155
Query: 286 ---------------------------FAMHGMGKEAVENFGRMQKVG-LKPNRVTFLSV 317
+A +GM E++E F RM K G + N VT +V
Sbjct: 156 DDAHRALRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNAVTLSAV 215
Query: 318 LNACSHGGLVEEGLNFFDKMVE---ECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIP 374
L AC+H G G D++++ E V +IDM + G++E A K +
Sbjct: 216 LLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTS----IIDMYCKCGKVEMARKAFDRMR 271
Query: 375 SEITDVVVWRTLLGACSFHGNVEMGERVTRKILEME-RGYGGDYVLMYNILAGVGRFG 431
+ +V W ++ HG+ + V EM G +Y+ ++LA G
Sbjct: 272 EK--NVKSWSAMVAGYGMHGHAKEALEV---FYEMNMAGVKPNYITFVSVLAACSHAG 324
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 92/201 (45%), Gaps = 6/201 (2%)
Query: 72 FDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKL 131
+++ T S ++ CA LG +H + K+G +S+V+V T++++MY G ++ + K
Sbjct: 207 YNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKA 266
Query: 132 FDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCR----NVVSWTGIIDGYTRMNRS 187
FD M E+N+ +W+ M+ G G + A +F EM N +++ ++ +
Sbjct: 267 FDRMREKNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYITFVSVLAACSHAGLL 326
Query: 188 NEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSC-QLIHGYGEKRGFTAFDIRVL 246
E F+ M EP ++ + + G +K LI G + F + +
Sbjct: 327 EEGWHWFKAMSHEFDVEPGVEHYGCMVDLLGRAGYLKEAFDLIKGMKLRPDFVVWGALLG 386
Query: 247 NCLIDTYAKCGCIFSASKLFE 267
C + G I SA KLFE
Sbjct: 387 ACRMHKNVDLGEI-SARKLFE 406
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 62/127 (48%), Gaps = 23/127 (18%)
Query: 271 VERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACS-----HGG 325
V++ N+ SW S+I+ A G EA+ F M+K+ LKPNR TF + +CS H G
Sbjct: 36 VDKTNVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALLDLHSG 95
Query: 326 LV--EEGLNF-FDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEIT--DV 380
++ L F F+ PD+ L+DM + G L A + EI+ ++
Sbjct: 96 RQAHQQALIFGFE---------PDLFVSSALVDMYSKCGELRDART----LFDEISHRNI 142
Query: 381 VVWRTLL 387
V W +++
Sbjct: 143 VSWTSMI 149
>gi|225450539|ref|XP_002277347.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 808
Score = 281 bits (719), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 142/383 (37%), Positives = 230/383 (60%), Gaps = 5/383 (1%)
Query: 72 FDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKL 131
D ++ CA LS G +H ++ ++G +S+V + AL++MY G + D+ KL
Sbjct: 302 LDEVVVVSVLSACAHLSIVKTGKMIHGLVIRMGIESYVNLQNALIHMYSGSGEIMDAQKL 361
Query: 132 FDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEAL 191
F+ + ++WN MI+G +K G +E AR+LF+ MP +++VSW+ +I GY + + +E L
Sbjct: 362 FNGSHNLDQISWNSMISGCMKCGSVEKARALFDVMPEKDIVSWSAVISGYAQHDCFSETL 421
Query: 192 ALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLID 251
ALF +M + P E +++V+ A + + +H Y K G ++ + L+D
Sbjct: 422 ALFHEMQLGQ-IRPDETILVSVISACTHLAALDQGKWVHAYIRKNGLKV-NVILGTTLLD 479
Query: 252 TYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNR 311
Y KCGC+ +A ++F +E K + SW ++I G A++G+ + +++ F M+ G+ PN
Sbjct: 480 MYMKCGCVENALEVFN--GMEEKGVSSWNALIIGLAVNGLVERSLDMFSEMKNNGVIPNE 537
Query: 312 VTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTAL 371
+TF+ VL AC H GLV+EG F M+E+ + P++KHYGC++D+LGRAG L +AEK
Sbjct: 538 ITFMGVLGACRHMGLVDEGRCHFASMIEKHGIEPNVKHYGCMVDLLGRAGLLNEAEKLIE 597
Query: 372 GIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFG 431
+P DV W LLGAC HG+ EMGERV RK++E++ + G +VL+ NI A G +
Sbjct: 598 SMPMA-PDVATWGALLGACKKHGDTEMGERVGRKLIELQPDHDGFHVLLSNIFASKGDWE 656
Query: 432 DAERLRRVMDERNAFKVPGCSLV 454
D +R +M ++ K PGCSL+
Sbjct: 657 DVLEVRGMMKQQGVVKTPGCSLI 679
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 121/425 (28%), Positives = 204/425 (48%), Gaps = 73/425 (17%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNL 92
++NT++ Y + S +KA LLYK + + + + P D++TY +++ CA
Sbjct: 108 MWNTMMRAYIQSNSAEKALLLYKLMVK------NNVGP--DNYTYPLVVQACAVRLLEFG 159
Query: 93 GTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVK 152
G ++H + KVGF S VYV L+NMY G ++D+ KLFDE P + V+WN ++ G VK
Sbjct: 160 GKEIHDHVLKVGFDSDVYVQNTLINMYAVCGNMRDARKLFDESPVLDSVSWNSILAGYVK 219
Query: 153 WGELEFARSLFEEMPCRNV-------------------------------VSWTGIIDGY 181
G++E A+ +F++MP RN+ VSW+ +I GY
Sbjct: 220 KGDVEEAKLIFDQMPQRNIVASNSMIVLLGKMGQVMEAWKLFNEMDEKDMVSWSALISGY 279
Query: 182 TRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAF 241
+ EAL +F +M A E+ +++VL A VK+ ++IHG + G ++
Sbjct: 280 EQNGMYEEALVMFIEMNA-NGMRLDEVVVVSVLSACAHLSIVKTGKMIHGLVIRMGIESY 338
Query: 242 DIRVLNCLIDTYAKCGCIFSASKLFEDI-------------------SVER--------- 273
+ + N LI Y+ G I A KLF SVE+
Sbjct: 339 -VNLQNALIHMYSGSGEIMDAQKLFNGSHNLDQISWNSMISGCMKCGSVEKARALFDVMP 397
Query: 274 -KNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLN 332
K++VSW+++ISG+A H E + F MQ ++P+ +SV++AC+H +++G
Sbjct: 398 EKDIVSWSAVISGYAQHDCFSETLALFHEMQLGQIRPDETILVSVISACTHLAALDQG-K 456
Query: 333 FFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSF 392
+ + + + ++ L+DM + G +E A + G+ E V W L+ +
Sbjct: 457 WVHAYIRKNGLKVNVILGTTLLDMYMKCGCVENALEVFNGM--EEKGVSSWNALIIGLAV 514
Query: 393 HGNVE 397
+G VE
Sbjct: 515 NGLVE 519
>gi|115448475|ref|NP_001048017.1| Os02g0730900 [Oryza sativa Japonica Group]
gi|46390470|dbj|BAD15931.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|46390866|dbj|BAD16370.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113537548|dbj|BAF09931.1| Os02g0730900 [Oryza sativa Japonica Group]
gi|125541007|gb|EAY87402.1| hypothetical protein OsI_08809 [Oryza sativa Indica Group]
gi|125583571|gb|EAZ24502.1| hypothetical protein OsJ_08263 [Oryza sativa Japonica Group]
Length = 488
Score = 281 bits (718), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 158/379 (41%), Positives = 224/379 (59%), Gaps = 10/379 (2%)
Query: 81 IRTCATL--SHPNLGTQLHAVISKVGFQ---SHVYVNTALVNMYVSLGFLKDSSKLFDEM 135
+ CA L S Q+HA++ K G S VY +T+LV +Y LG L D+ K+FD M
Sbjct: 67 LAACARLLPSAAAEAEQIHALLVKSGDPPSVSGVYASTSLVRVYARLGRLGDARKMFDGM 126
Query: 136 PERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFR 195
P + +V+WNV++ G+V+ +L+ A +F EMP RNVVSW +I G+ R EA+ LF
Sbjct: 127 PVKTVVSWNVLLDGIVRASDLDAAWEVFVEMPERNVVSWNTVIAGFVRHGWVQEAVDLFA 186
Query: 196 KMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAK 255
+M P E T++ + A+ G + + HGY +R F+ D + LI+ Y +
Sbjct: 187 EMTVVYGLAPDEATMVGFVSAVRDMGVLGIGRCAHGYVIRREFS-LDGALGVALINMYTR 245
Query: 256 CGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFL 315
CG + A + F SV KN+ WTS+I GFA HG + A+ F M+++G++PN VTFL
Sbjct: 246 CGSMGDAFRCFS--SVASKNVEQWTSVIGGFAAHGHPEMALRLFTEMRQLGIEPNGVTFL 303
Query: 316 SVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPS 375
+VLNACSHGGLV EG +F+ M + ++HYGCLID+LGRAG LE+A + A +P
Sbjct: 304 AVLNACSHGGLVNEGFKYFNLM-RSMGIKSTMQHYGCLIDLLGRAGFLEEAFELASSLP- 361
Query: 376 EITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAER 435
E +V+W +LL AC HGNVEM E RK+ E +G YVL+ N A G++ D +R
Sbjct: 362 EDPGLVIWSSLLAACQSHGNVEMAEVAARKLAHAEPRHGSSYVLLSNTYARAGQWEDLKR 421
Query: 436 LRRVMDERNAFKVPGCSLV 454
RR M+E K PG S +
Sbjct: 422 TRRKMEEYGVMKQPGLSWI 440
>gi|356553601|ref|XP_003545143.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
chloroplastic-like [Glycine max]
Length = 534
Score = 281 bits (718), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 165/476 (34%), Positives = 258/476 (54%), Gaps = 30/476 (6%)
Query: 3 ILQNSQTPNNITTQIHSHLLTTNSLLHHSQLFNTLLHF-YSLAESPQKAFLLYKQLQQ-- 59
+LQ T +IH+H++ T L HH+ + +L F S + A+LL+ +
Sbjct: 30 MLQTQCTNMKDLQKIHAHIIKTG-LAHHTVAASRVLTFCASSSGDINYAYLLFTTIPSPN 88
Query: 60 -------IYTHSHSPLPPLFDSF--------------TYSFLIRTCATLSHPNLGTQLHA 98
I S S P L S TY + + A L G QLH
Sbjct: 89 LYCWNTIIRGFSRSSTPHLAISLFVDMLCSSVLPQRLTYPSVFKAYAQLGAGYDGAQLHG 148
Query: 99 VISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEF 158
+ K+G + ++ ++ MY + G L ++ ++FDE+ + ++V N MI GL K GE++
Sbjct: 149 RVVKLGLEKDQFIQNTIIYMYANSGLLSEARRVFDELVDLDVVACNSMIMGLAKCGEVDK 208
Query: 159 ARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIW 218
+R LF+ MP R V+W +I GY R R EAL LFRKM E EPSE T++++L A
Sbjct: 209 SRRLFDNMPTRTRVTWNSMISGYVRNKRLMEALELFRKMQG-ERVEPSEFTMVSLLSACA 267
Query: 219 QNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVS 278
G +K + +H Y KRG ++ VL +ID Y KCG I A ++FE + + L
Sbjct: 268 HLGALKHGEWVHDY-VKRGHFELNVIVLTAIIDMYCKCGVIVKAIEVFE--ASPTRGLSC 324
Query: 279 WTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMV 338
W SII G A++G ++A+E F +++ LKP+ V+F+ VL AC + G V + ++F M+
Sbjct: 325 WNSIIIGLALNGYERKAIEYFSKLEASDLKPDHVSFIGVLTACKYIGAVGKARDYFSLMM 384
Query: 339 EECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEM 398
+ E+ P IKHY C++++LG+A LE+AE+ G+P + D ++W +LL +C HGNVE+
Sbjct: 385 NKYEIEPSIKHYTCMVEVLGQAALLEEAEQLIKGMPLK-ADFIIWGSLLSSCRKHGNVEI 443
Query: 399 GERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
+R +++ E+ Y+LM N+ A +F +A R +M ER A K PGCS +
Sbjct: 444 AKRAAQRVCELNPSDASGYLLMSNVQAASNQFEEAMEQRILMRERLAEKEPGCSSI 499
>gi|449485565|ref|XP_004157209.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 953
Score = 281 bits (718), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 137/374 (36%), Positives = 237/374 (63%), Gaps = 5/374 (1%)
Query: 81 IRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNL 140
+ CA L N+G +H++ K+G +S++ + AL+ MY G + + KLFDE +L
Sbjct: 383 LSACANLLVVNMGKLIHSLSLKIGTESYINLQNALIYMYSKCGDIMVARKLFDEAYLLDL 442
Query: 141 VTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVAC 200
++WN MI+G +K ++ A+++F+ MP ++VVSW+ +I GY + + +E LALF++M
Sbjct: 443 ISWNSMISGYLKCNLVDNAKAIFDSMPEKDVVSWSSMISGYAQNDLFDETLALFQEMQMS 502
Query: 201 EYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIF 260
+ +P E T+++V+ A + ++ + +H Y ++ G T ++ + LID Y KCGC+
Sbjct: 503 GF-KPDETTLVSVISACARLAALEQGKWVHAYIKRNGLT-INVILGTTLIDMYMKCGCVE 560
Query: 261 SASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNA 320
+A ++F + K + +W ++I G AM+G+ + +++ F M+K + PN +TF+ VL A
Sbjct: 561 TALEVF--YGMIEKGISTWNALILGLAMNGLVESSLDMFSNMKKCHVTPNEITFMGVLGA 618
Query: 321 CSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDV 380
C H GLV+EG + F M+ + ++ P++KHYGC++D+LGRAG+L++AE+ +P DV
Sbjct: 619 CRHMGLVDEGQHHFYSMIHDHKIQPNVKHYGCMVDLLGRAGKLQEAEELLNRMPM-TPDV 677
Query: 381 VVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVM 440
W LLGAC HG+ EMG RV RK++E++ + G +VL+ NI A G++ D +R +M
Sbjct: 678 ATWGALLGACKKHGDSEMGRRVGRKLIELQPDHDGFHVLLSNIYASKGKWDDVLEIRGMM 737
Query: 441 DERNAFKVPGCSLV 454
+ K+PGCS++
Sbjct: 738 TKHRVLKIPGCSMI 751
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 107/417 (25%), Positives = 181/417 (43%), Gaps = 73/417 (17%)
Query: 41 YSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLGTQLHAVI 100
Y SP AF LYK + Y + D++TY LI+ C+ Q+H +
Sbjct: 188 YIQTNSPHFAFTLYKSMLSNYLGA--------DNYTYPLLIQACSIRRSEWEAKQVHNHV 239
Query: 101 SKVGFQSHVYVNTALVNM-------------------------------YVSLGFLKDSS 129
K+GF S VYV L+N Y+ +G ++++
Sbjct: 240 LKLGFDSDVYVRNTLINCFSVCSNMTDACRVFNESSVLDSVSWNSILAGYIEIGNVEEAK 299
Query: 130 KLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNE 189
++ +MPER+++ N MI G + A LF+EM +++V+W+ +I + + E
Sbjct: 300 HIYHQMPERSIIASNSMIVLFGMRGLVVEACKLFDEMLEKDMVTWSALIACFQQNEMYEE 359
Query: 190 ALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCL 249
A+ F M E+ ++ L A V +LIH K G ++ I + N L
Sbjct: 360 AIRTFVGMHKIGVM-VDEVVAVSALSACANLLVVNMGKLIHSLSLKIGTESY-INLQNAL 417
Query: 250 IDTYAKCGCIFSASKLFEDI-----------------------------SVERKNLVSWT 280
I Y+KCG I A KLF++ S+ K++VSW+
Sbjct: 418 IYMYSKCGDIMVARKLFDEAYLLDLISWNSMISGYLKCNLVDNAKAIFDSMPEKDVVSWS 477
Query: 281 SIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEE 340
S+ISG+A + + E + F MQ G KP+ T +SV++AC+ +E+G + ++
Sbjct: 478 SMISGYAQNDLFDETLALFQEMQMSGFKPDETTLVSVISACARLAALEQG-KWVHAYIKR 536
Query: 341 CEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVE 397
+ ++ LIDM + G +E A + G+ + + W L+ + +G VE
Sbjct: 537 NGLTINVILGTTLIDMYMKCGCVETALEVFYGMIEK--GISTWNALILGLAMNGLVE 591
>gi|147818273|emb|CAN64718.1| hypothetical protein VITISV_026719 [Vitis vinifera]
Length = 499
Score = 281 bits (718), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 149/439 (33%), Positives = 256/439 (58%), Gaps = 13/439 (2%)
Query: 17 IHSHLLTTNSLLHHSQ-LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSF 75
+H L +++ H S L+NT+ Y+ + +P A LL++ + + H P P D++
Sbjct: 37 LHHARLLFDAVYHPSTYLYNTMFRVYAASPTPLHALLLHRHMFR-----HGPPP---DTY 88
Query: 76 TYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEM 135
T+ FL++ C+ L+H G +LH K G HV+V +L+++Y S + + ++FD M
Sbjct: 89 TFPFLLKACSALAHLLKGQELHCQALKFGLGGHVFVENSLIHLYGSNSRMDSARRVFDGM 148
Query: 136 PERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFR 195
R++ +W ++ +E AR +F+EMP R+VVS++ ++ Y R NR EAL LFR
Sbjct: 149 GYRDIASWTTLLACYANSCSVEAARKVFDEMPERSVVSYSAMLAAYVRGNRFREALELFR 208
Query: 196 KMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAK 255
++ + + EPS+ +++VL A G + + ++ + D R+ LID + K
Sbjct: 209 ELFSVK-IEPSDSCVMSVLCACANLGALDVGRWVYSFVCHSKGDYVDSRIATALIDMFFK 267
Query: 256 CGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFL 315
CG I A +FE + K++ WT+++SG AMHG+G++ +E F +M G+KP+ VTF+
Sbjct: 268 CGSIEHALLVFE--GAKEKHVGEWTAMLSGLAMHGLGEQLIEAFEKMVDSGIKPDEVTFV 325
Query: 316 SVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPS 375
++L+ CSH GLV EGL +FD+M + V P ++H+GC++D+LGRAG ++QA + +P
Sbjct: 326 ALLSGCSHSGLVNEGLYYFDRMESDFGVEPTVEHFGCVVDLLGRAGLIDQAMQLISEMPF 385
Query: 376 EITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAER 435
E + +W LL AC + NVE+GE + +++ E G Y+ + ++ GR+ + E+
Sbjct: 386 E-PNAAIWGALLNACRVYKNVEVGELAAQWLIKDEPWNGALYMTLLSLYREAGRWDEVEK 444
Query: 436 LRRVMDERNAFKVPGCSLV 454
++ M E K PGCSL+
Sbjct: 445 VKLKMKEVGCRKGPGCSLI 463
>gi|224136482|ref|XP_002326871.1| predicted protein [Populus trichocarpa]
gi|222835186|gb|EEE73621.1| predicted protein [Populus trichocarpa]
Length = 581
Score = 280 bits (717), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 171/503 (33%), Positives = 265/503 (52%), Gaps = 74/503 (14%)
Query: 14 TTQIHSHLLTTNSLLHHSQLFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFD 73
+T+ HL S + L N+++ + + AF LYK L++ + P D
Sbjct: 49 STRHARHLFDNRSHRGDTFLCNSMIKSHVVMRQLADAFTLYKDLRR-----ETCFVP--D 101
Query: 74 SFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFD 133
+FT++ L + CA G + H + K+GF +YV+TALV+MY G L + K+F+
Sbjct: 102 NFTFTVLAKCCALRMAVWEGLETHGHVVKIGFCFDMYVSTALVDMYAKFGNLGLARKVFN 161
Query: 134 EMPERNLVTW-------------------------------NVMITGLVKWGELEFARSL 162
+MP+R+LV+W N++I G VK G++E ARSL
Sbjct: 162 DMPDRSLVSWTALIGGYVRRGDMGNAWFLFKLMPGRDSAAFNLLIDGYVKVGDMESARSL 221
Query: 163 FEEMPCRNVVSWT-------------------------------GIIDGYTRMNRSNEAL 191
F+EMP RNV+SWT +I GY + + +EAL
Sbjct: 222 FDEMPERNVISWTSMIYGYCNNGDVLSARFLFDAMPEKNLVSWNAMIGGYCQNKQPHEAL 281
Query: 192 ALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLID 251
LFR++ + EP+E+T++++LPAI G ++ + +H + +++ A + V L+D
Sbjct: 282 KLFRELQSSTVFEPNEVTVVSILPAIATLGALELGEWVHRFVQRKKLDA-AVNVCTSLVD 340
Query: 252 TYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNR 311
Y KCG I A K+F +I +K +W ++I+GFAM+G+ EA+E F MQ+ G+KPN
Sbjct: 341 MYLKCGEISKARKVFSEIP--KKETATWNALINGFAMNGLASEALEAFSEMQQEGIKPND 398
Query: 312 VTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTAL 371
+T VL+ACSHGGLVEEG F M+E + P I+HYGCL+D+LGRAG L++AE
Sbjct: 399 ITMTGVLSACSHGGLVEEGKGQFKAMIES-GLSPKIEHYGCLVDLLGRAGCLDEAENLIK 457
Query: 372 GIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFG 431
+P E +++ + AC F +V +RV + + ME G G YV+M N+ A R+
Sbjct: 458 SMPFEANGIIL-SSFSFACGFSNDVTRAQRVLNQAVNMEPGNNGIYVMMRNLYAMEERWK 516
Query: 432 DAERLRRVMDERNAFKVPGCSLV 454
D + + +M R A K G S +
Sbjct: 517 DVKEINGLMRRRGAKKEVGSSAI 539
>gi|326509777|dbj|BAJ87104.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 624
Score = 280 bits (717), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 153/406 (37%), Positives = 230/406 (56%), Gaps = 15/406 (3%)
Query: 60 IYTHS----HSPLPPLFDSFTYSFLIRTCATLSHP-------NLGTQLHAVISKVGFQSH 108
I+ HS H P L L+ T TLS +LG LHA K+
Sbjct: 94 IHAHSSRGLHLPGLALLSDMLSEGLLPTAHTLSASLPACRGLSLGRALHAYAFKLALSGD 153
Query: 109 VYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPC 168
YV TAL++MY G + LFDEMP+ ++V+ M+T G L+ AR LF+ +P
Sbjct: 154 SYVATALLSMYARAGDAAAARALFDEMPDPHVVSVTAMLTCYANMGALDDARRLFDGLPR 213
Query: 169 RNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQL 228
++ + W +IDGYT+ + NEAL LFR+M+ EP E+T++ VL A+ Q G V+S +
Sbjct: 214 KDFICWNAMIDGYTQHGKPNEALQLFRRMLRSS-AEPDEVTVVLVLSAVAQLGTVESGKW 272
Query: 229 IHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAM 288
+H Y + ++RV L+D Y KCG + A +F I K++V W ++I+G+AM
Sbjct: 273 LHSYVKNSRCVQLNVRVATALVDMYCKCGSLEDAVAVFHGIG--NKDIVVWNAMINGYAM 330
Query: 289 HGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIK 348
HG ++A+E F +++ GL P +TF+ +LNACSH GLVEEG +FF M E + P I+
Sbjct: 331 HGDSRKALEMFVQLRDQGLWPTDITFIGLLNACSHSGLVEEGRSFFQSMEHEYGIDPKIE 390
Query: 349 HYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILE 408
HYGC++D+LGRAG +E+A + + D V+W +LL AC H N+ +G+R+ ++
Sbjct: 391 HYGCMVDLLGRAGLIEEAFHLVQSL-TITPDAVMWVSLLAACRLHKNMALGQRIADFLVA 449
Query: 409 MERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
G Y+L+ NI A VG++ + R+R +M K PGCS +
Sbjct: 450 NGLANSGMYILLSNIYAAVGKWEEVARVRSMMKASGIQKEPGCSAI 495
>gi|225435554|ref|XP_002283117.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 624
Score = 280 bits (716), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 161/477 (33%), Positives = 271/477 (56%), Gaps = 30/477 (6%)
Query: 4 LQNSQTPNNITTQIHSHLLTTNSLLH---HSQLFNTLL--HFYSLA-------ESPQKAF 51
L++ ++ N I Q H+HL+TT +LH ++L L+ F SL+ + P+
Sbjct: 22 LESCKSMNQIK-QTHAHLITTGLILHPITANKLLKVLIASSFGSLSYAHQLFDQIPKPDV 80
Query: 52 LLYKQLQQ----IYTHSHSPLPPLF----------DSFTYSFLIRTCATLSHPNLGTQLH 97
+Y + + I T SH+ + + +T+ F+ + C G Q+
Sbjct: 81 FIYNTMIKAHAVIPTSSHNSMRIFLSMVRVSGFLPNRYTFVFVFKACGNGLGVLEGEQIR 140
Query: 98 AVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELE 157
K+G +S+++V A++ MY + G + ++ ++FD +++L +WN+MI G V GE+
Sbjct: 141 VHAIKIGLESNLFVTNAMIRMYANWGLVDEARRVFDWSLDQDLYSWNIMIGGYVGSGEIG 200
Query: 158 FARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAI 217
A+ +F+EM R+VVSWT II GY ++ EAL LF +M+ P+E T+ + L A
Sbjct: 201 RAKEMFDEMSERDVVSWTTIIAGYVQVGCFKEALDLFHEMLQTG-PPPNEFTLASALAAC 259
Query: 218 WQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLV 277
+ + IH Y +K + R+L L+D YAKCG I A+K+F D + +
Sbjct: 260 ANLVALDQGRWIHVYIDKSEIK-MNERLLASLLDMYAKCGEIDFAAKVFHDEYGLKLKVW 318
Query: 278 SWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKM 337
W ++I G+AMHG KEA++ F +M+ + PN+VTF+++LNACSHG LVEEG +F M
Sbjct: 319 PWNAMIGGYAMHGKSKEAIDLFEQMKVEKVSPNKVTFVALLNACSHGKLVEEGRGYFKSM 378
Query: 338 VEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVE 397
+ P+I+HYGC++D+LGR+G L++AE+T +P D +W LLGAC H ++E
Sbjct: 379 ASSYGIEPEIEHYGCMVDLLGRSGLLKEAEETVFNMPMA-PDATIWGALLGACRIHKDIE 437
Query: 398 MGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
G+R+ + I E++ + G +VL+ N+ + G++ +A+ +R+ ++ K PGCS +
Sbjct: 438 RGQRIGKIIKELDSDHIGCHVLLANLYSASGQWDEAKAVRQKIEVSGRKKTPGCSSI 494
>gi|449446125|ref|XP_004140822.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 809
Score = 280 bits (716), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 137/374 (36%), Positives = 237/374 (63%), Gaps = 5/374 (1%)
Query: 81 IRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNL 140
+ CA L N+G +H++ K+G +S++ + AL+ MY G + + KLFDE +L
Sbjct: 248 LSACANLLVVNMGKLIHSLSLKIGTESYINLQNALIYMYSKCGDIMVARKLFDEAYLLDL 307
Query: 141 VTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVAC 200
++WN MI+G +K ++ A+++F+ MP ++VVSW+ +I GY + + +E LALF++M
Sbjct: 308 ISWNSMISGYLKCNLVDNAKAIFDSMPEKDVVSWSSMISGYAQNDLFDETLALFQEMQMS 367
Query: 201 EYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIF 260
+ +P E T+++V+ A + ++ + +H Y ++ G T ++ + LID Y KCGC+
Sbjct: 368 GF-KPDETTLVSVISACARLAALEQGKWVHAYIKRNGLT-INVILGTTLIDMYMKCGCVE 425
Query: 261 SASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNA 320
+A ++F + K + +W ++I G AM+G+ + +++ F M+K + PN +TF+ VL A
Sbjct: 426 TALEVF--YGMIEKGISTWNALILGLAMNGLVESSLDMFSNMKKCHVTPNEITFMGVLGA 483
Query: 321 CSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDV 380
C H GLV+EG + F M+ + ++ P++KHYGC++D+LGRAG+L++AE+ +P DV
Sbjct: 484 CRHMGLVDEGQHHFYSMIHDHKIQPNVKHYGCMVDLLGRAGKLQEAEELLNRMPMT-PDV 542
Query: 381 VVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVM 440
W LLGAC HG+ EMG RV RK++E++ + G +VL+ NI A G++ D +R +M
Sbjct: 543 ATWGALLGACKKHGDSEMGRRVGRKLIELQPDHDGFHVLLSNIYASKGKWDDVLEIRGMM 602
Query: 441 DERNAFKVPGCSLV 454
+ K+PGCS++
Sbjct: 603 TKHRVLKIPGCSMI 616
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 109/424 (25%), Positives = 189/424 (44%), Gaps = 71/424 (16%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNL 92
++N ++ Y SP AF LYK + Y + D++TY LI+ C+
Sbjct: 45 MWNMMIRAYIQTNSPHFAFTLYKSMLSNYLGA--------DNYTYPLLIQACSIRRSEWE 96
Query: 93 GTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVK 152
Q+H + K+GF S VYV L+N + + D+ ++F+E + V+WN ++ G ++
Sbjct: 97 AKQVHNHVLKLGFDSDVYVRNTLINCFSVCSNMTDACRVFNESSVLDSVSWNSILAGYIE 156
Query: 153 WGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKM-----------VAC- 200
G +E A+ ++ +MP R++++ +I + EA LF +M +AC
Sbjct: 157 IGNVEEAKHIYHQMPERSIIASNSMIVLFGMRGLVVEACKLFDEMLEKDMVTWSALIACF 216
Query: 201 ----EYTEP--------------SEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFD 242
Y E E+ ++ L A V +LIH K G ++
Sbjct: 217 QQNEMYEEAIRTFVGMHKIGVMVDEVVAVSALSACANLLVVNMGKLIHSLSLKIGTESY- 275
Query: 243 IRVLNCLIDTYAKCGCIFSASKLFEDI-----------------------------SVER 273
I + N LI Y+KCG I A KLF++ S+
Sbjct: 276 INLQNALIYMYSKCGDIMVARKLFDEAYLLDLISWNSMISGYLKCNLVDNAKAIFDSMPE 335
Query: 274 KNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNF 333
K++VSW+S+ISG+A + + E + F MQ G KP+ T +SV++AC+ +E+G +
Sbjct: 336 KDVVSWSSMISGYAQNDLFDETLALFQEMQMSGFKPDETTLVSVISACARLAALEQG-KW 394
Query: 334 FDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFH 393
++ + ++ LIDM + G +E A + G+ + + W L+ + +
Sbjct: 395 VHAYIKRNGLTINVILGTTLIDMYMKCGCVETALEVFYGMIEK--GISTWNALILGLAMN 452
Query: 394 GNVE 397
G VE
Sbjct: 453 GLVE 456
>gi|298204516|emb|CBI23791.3| unnamed protein product [Vitis vinifera]
Length = 615
Score = 280 bits (716), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 145/385 (37%), Positives = 229/385 (59%), Gaps = 3/385 (0%)
Query: 71 LFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSK 130
L D+FT F++++CA LS +G +H +VG + YV +L++MYV G + D+ K
Sbjct: 104 LGDNFTLPFVLKSCADLSRVCMGRCVHGQGLRVGLEGDFYVGASLIDMYVKCGVIGDARK 163
Query: 131 LFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEA 190
LFD+M R++ +WN +I G +K GE+ A LFE M RN+VSWT +I GYT+ + +A
Sbjct: 164 LFDKMIVRDMASWNALIAGYMKEGEIGVAEDLFERMEHRNIVSWTAMISGYTQNGFAEQA 223
Query: 191 LALFRKMVA-CEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCL 249
L LF +M+ +P+ +TI++VLPA Q+ ++ + IH + G + V L
Sbjct: 224 LGLFDEMLQDGSEMKPNWVTIVSVLPACAQSAALERGRRIHDFANGIGLH-LNSSVQTAL 282
Query: 250 IDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKP 309
YAKC + A F+ I+ KNL++W ++I+ +A HG G EAV F M + G++P
Sbjct: 283 AGMYAKCYSLVEARCCFDMIAQNGKNLIAWNTMITAYASHGCGVEAVSIFENMLRAGVQP 342
Query: 310 NRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKT 369
+ VTF+ +L+ CSH GL++ GLN F+ M V P ++HY C++D+LGRAGRL +A++
Sbjct: 343 DAVTFMGLLSGCSHSGLIDAGLNHFNDMGTIHSVEPRVEHYACVVDLLGRAGRLVEAKEL 402
Query: 370 ALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGR 429
+P + VW LL AC H N+E+ E R++ +E G+YVL+ N+ A G
Sbjct: 403 ISQMPMQ-AGPSVWGALLAACRSHRNLEIAELAARRLFVLEPDNSGNYVLLSNLYAEAGM 461
Query: 430 FGDAERLRRVMDERNAFKVPGCSLV 454
+ + ++LR ++ + K PGCS +
Sbjct: 462 WEEVKKLRALLKYQGMKKSPGCSWI 486
>gi|225427963|ref|XP_002277549.1| PREDICTED: pentatricopeptide repeat-containing protein At2g21090
[Vitis vinifera]
Length = 612
Score = 280 bits (715), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 141/375 (37%), Positives = 225/375 (60%), Gaps = 4/375 (1%)
Query: 73 DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLF 132
+ F+++ ++ C L L Q+H I GF S+V +++++++ YV G + D+ KLF
Sbjct: 191 NGFSFAGVLTVCVKLKEVGLTRQVHGQILVAGFLSNVVLSSSVLDAYVKCGLMGDARKLF 250
Query: 133 DEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALA 192
DEM R+++ W M++G KWG+++ A LF EMP +N VSWT +I GY R ++AL
Sbjct: 251 DEMSARDVLAWTTMVSGYAKWGDMKSANELFVEMPEKNPVSWTALISGYARNGMGHKALE 310
Query: 193 LFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDT 252
LF KM+ + P + T + L A +K + IH Y + F I V++ LID
Sbjct: 311 LFTKMMLF-HVRPDQFTFSSCLCACASIASLKHGKQIHAYLLRINFQPNTI-VVSALIDM 368
Query: 253 YAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRV 312
Y+KCG + K+F D+ + ++V W +IIS A HG G+EA++ M + G KP+++
Sbjct: 369 YSKCGSLGIGRKVF-DLMGNKLDVVLWNTIISALAQHGCGEEAIQMLDDMVRSGAKPDKI 427
Query: 313 TFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALG 372
TF+ +LNACSH GLV++GLNFF+ M + ++P +HY CLID+LGRAG E+
Sbjct: 428 TFVVILNACSHSGLVQQGLNFFESMSCDYGIVPSQEHYACLIDLLGRAGCFEEVMDQLEK 487
Query: 373 IPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGD 432
+P + D VW LLG C HG++E+G + +++E+E YVL+ +I A +GR+
Sbjct: 488 MPYKPDD-RVWNALLGVCRIHGHIELGRKAAERLIELEPQSSTAYVLLSSIYAVLGRWES 546
Query: 433 AERLRRVMDERNAFK 447
+++R++M+ER K
Sbjct: 547 VQKVRQLMNERQVKK 561
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 110/395 (27%), Positives = 186/395 (47%), Gaps = 46/395 (11%)
Query: 72 FDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSH-VYVNTALVNMYVSLGFLKDSSK 130
DS T + L++ CA G ++H + G + +++ L+NMY G ++ K
Sbjct: 57 LDSRTLASLLQHCADSRALREGKRVHLHLKLTGLKRPGTFLSNHLINMYAKCGKEVEARK 116
Query: 131 LFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEA 190
+FD+M RNL +WN M++G K G ++ AR LF++MP ++VVSW ++ + + +EA
Sbjct: 117 VFDKMSARNLYSWNNMLSGYAKLGMIKPARKLFDKMPEKDVVSWNTMVIAHAQCGYWDEA 176
Query: 191 LAL---FRKM-VACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVL 246
L FR++ + C + + VL + +V + +HG GF + ++ +
Sbjct: 177 LRFYSEFRQLGIQC-----NGFSFAGVLTVCVKLKEVGLTRQVHGQILVAGFLS-NVVLS 230
Query: 247 NCLIDTYAKCGCIFSASKLFEDISVE-----------------------------RKNLV 277
+ ++D Y KCG + A KLF+++S KN V
Sbjct: 231 SSVLDAYVKCGLMGDARKLFDEMSARDVLAWTTMVSGYAKWGDMKSANELFVEMPEKNPV 290
Query: 278 SWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKM 337
SWT++ISG+A +GMG +A+E F +M ++P++ TF S L AC+ ++ G +
Sbjct: 291 SWTALISGYARNGMGHKALELFTKMMLFHVRPDQFTFSSCLCACASIASLKHGKQIHAYL 350
Query: 338 VEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVE 397
+ P+ LIDM + G L K + DVV+W T++ A + HG
Sbjct: 351 L-RINFQPNTIVVSALIDMYSKCGSLGIGRKV-FDLMGNKLDVVLWNTIISALAQHG--- 405
Query: 398 MGERVTRKILEMER-GYGGDYVLMYNILAGVGRFG 431
GE + + +M R G D + IL G
Sbjct: 406 CGEEAIQMLDDMVRSGAKPDKITFVVILNACSHSG 440
>gi|224112267|ref|XP_002316137.1| predicted protein [Populus trichocarpa]
gi|222865177|gb|EEF02308.1| predicted protein [Populus trichocarpa]
Length = 601
Score = 280 bits (715), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 161/452 (35%), Positives = 254/452 (56%), Gaps = 45/452 (9%)
Query: 4 LQNSQTPNNITTQI-HSHLLTTNSLLHHSQLFNTLLHFYSLAESPQKAFLLYKQLQQIYT 62
L NS T N T + ++H L LFN++ YS + +P KA L+ I
Sbjct: 64 LINSCTQNPTTASMDYAHQLFEAIPQPDIVLFNSMFRGYSRSNAPLKAISLF-----IKA 118
Query: 63 HSHSPLPPLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSL 122
+++ LP D +T+ L++ C G QLH + K+G + YV L+NMY
Sbjct: 119 LNYNLLP---DDYTFPSLLKACVVAKAFQQGKQLHCLAIKLGLNENPYVCPTLINMYAGC 175
Query: 123 GFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYT 182
+ + ++FDE+ E PC VVS+ II GY
Sbjct: 176 NDVDGAQRVFDEILE-----------------------------PC--VVSYNAIITGYA 204
Query: 183 RMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFD 242
R +R NEAL+LFR++ A +P+++T+L+VL + G + + IH Y +K G +
Sbjct: 205 RSSRPNEALSLFRQLQA-RKLKPNDVTVLSVLSSCALLGALDLGKWIHEYVKKNGLDKY- 262
Query: 243 IRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRM 302
++V LID YAKCG + A +FE +SV ++ +W+++I +AMHG G++ + F M
Sbjct: 263 VKVNTALIDMYAKCGSLDGAISVFESMSV--RDTQAWSAMIVAYAMHGQGQDVMSMFEEM 320
Query: 303 QKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGR 362
+ ++P+ +TFL +L ACSH GLV+EG +F M E ++P IKHYGC++D+LGRAG
Sbjct: 321 ARAKVQPDEITFLGLLYACSHTGLVDEGFRYFYSMSEVYGIIPGIKHYGCMVDLLGRAGL 380
Query: 363 LEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYN 422
L +A K +P + T ++WRTLL +CS HGN+E+ ++V +ILE++ +GGDYV++ N
Sbjct: 381 LHEAYKFIDELPIKPTP-ILWRTLLSSCSSHGNLELAKQVMNQILELDDSHGGDYVILSN 439
Query: 423 ILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
+ A G++ D + LR++M + A K+PGCS +
Sbjct: 440 LCARAGKWEDVDTLRKLMIHKGAVKIPGCSSI 471
>gi|359485813|ref|XP_003633340.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 679
Score = 280 bits (715), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 168/494 (34%), Positives = 255/494 (51%), Gaps = 78/494 (15%)
Query: 22 LTTNSLLHHSQLFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLI 81
+ SL+H +NT++ Y + +L+ +L H LP D+FT +I
Sbjct: 73 IQRRSLIH----WNTIIKCYVENQFSHDGIVLFHEL------VHEYLP---DNFTLPCVI 119
Query: 82 RTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFD-------- 133
+ CA L G Q+H + K+GF S V+V +LVNMY G + + K+FD
Sbjct: 120 KGCARLGVVQEGKQIHGLALKIGFGSDVFVQGSLVNMYSKCGEIDCARKVFDGMIDKDVV 179
Query: 134 -----------------------EMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRN 170
EMPER+ +W V++ GL K G++E AR LF++MPCRN
Sbjct: 180 LWNSLIDGYARCGEIDIALQLFEEMPERDAFSWTVLVDGLSKCGKVESARKLFDQMPCRN 239
Query: 171 VVSWTGIIDGYTRMNRSNEALALFRKMVACEY---------------------------- 202
+VSW +I+GY + + AL LF +M +
Sbjct: 240 LVSWNAMINGYMKSGDFDSALELFYQMPIWDLVTWNLMIAGYELNGQFMDAVKMFFMMLK 299
Query: 203 --TEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIF 260
+ PS T+++VL A+ + + IH Y EK GF D + LI+ YAKCGCI
Sbjct: 300 LGSRPSHATLVSVLSAVSGLAVLGKGRWIHSYMEKNGFE-LDGILGTSLIEMYAKCGCIE 358
Query: 261 SASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNA 320
SA +F ++++K + WT+II G +HGM A+ F M K GLKPN + F+ VLNA
Sbjct: 359 SALTVFR--AIQKKKVGHWTAIIVGLGIHGMANHALALFLEMCKTGLKPNAIIFIGVLNA 416
Query: 321 CSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDV 380
C+H GLV++G +FD M+ E ++ P ++HYGCL+D+L RAG LE+A+ T +P +
Sbjct: 417 CNHAGLVDDGRQYFDMMMNEYKIEPTLEHYGCLVDILCRAGHLEEAKNTIENMPIS-PNK 475
Query: 381 VVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVM 440
V+W +LLG HG +++GE ++++E+ G Y+L+ N+ A G + +R +M
Sbjct: 476 VIWMSLLGGSRNHGKIDIGEYAAQRVIEVAPETIGCYILLSNMYAASGMWEKVSHVREMM 535
Query: 441 DERNAFKVPGCSLV 454
+R K PGCS V
Sbjct: 536 YKRGFRKDPGCSSV 549
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 92/367 (25%), Positives = 163/367 (44%), Gaps = 51/367 (13%)
Query: 87 LSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVM 146
L P QLHA K +H +V++ L+ +Y P+ N
Sbjct: 23 LCAPQEVEQLHAFSLKTAIFNHPFVSSRLLALYSD--------------PKIN------- 61
Query: 147 ITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPS 206
+L +ARS+F+ + R+++ W II Y S++ + LF ++V EY P
Sbjct: 62 --------DLGYARSIFDRIQRRSLIHWNTIIKCYVENQFSHDGIVLFHELVH-EYL-PD 111
Query: 207 EITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLF 266
T+ V+ + G V+ + IHG K GF + D+ V L++ Y+KCG I A K+F
Sbjct: 112 NFTLPCVIKGCARLGVVQEGKQIHGLALKIGFGS-DVFVQGSLVNMYSKCGEIDCARKVF 170
Query: 267 EDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTF--LSVLNACSHG 324
+ + K++V W S+I G+A G A++ F M P R F +++ S
Sbjct: 171 DGMI--DKDVVLWNSLIDGYARCGEIDIALQLFEEM------PERDAFSWTVLVDGLSKC 222
Query: 325 GLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWR 384
G VE FD+M C ++ + +I+ ++G + A + +P I D+V W
Sbjct: 223 GKVESARKLFDQM--PCR---NLVSWNAMINGYMKSGDFDSALELFYQMP--IWDLVTWN 275
Query: 385 TLLGACSFHGNVEMGERVTRKILEM-ERGYGGDYVLMYNILAGVGRFGDAERLRRVMDER 443
++ +G ++ +L++ R V + + ++G+ G + M E+
Sbjct: 276 LMIAGYELNGQFMDAVKMFFMMLKLGSRPSHATLVSVLSAVSGLAVLGKGRWIHSYM-EK 334
Query: 444 NAFKVPG 450
N F++ G
Sbjct: 335 NGFELDG 341
>gi|296083752|emb|CBI23741.3| unnamed protein product [Vitis vinifera]
Length = 545
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 156/438 (35%), Positives = 254/438 (57%), Gaps = 13/438 (2%)
Query: 18 HSHLLTTNSLLHHSQ-LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFT 76
HS L+ +SL H + L+N+L++ Y+ +AF L+ Q+ S LP D FT
Sbjct: 76 HSRLVF-DSLQHKNVFLWNSLINGYAKNRLYNEAFQLFNQMC-----SSDVLP---DDFT 126
Query: 77 YSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMP 136
S L + + L G +H ++GF S V ++++MY G ++S K+FDEM
Sbjct: 127 LSTLSKVSSELGALFSGKSIHGKSIRIGFVSDTVVANSIMSMYCKCGNFEESRKVFDEMT 186
Query: 137 ERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRK 196
RN +WNV+I G G L R +F+ M CRNV SWT +I+GY S+EAL+LFR
Sbjct: 187 IRNSGSWNVLIAGYAVSGNLVVGRRVFDRMKCRNVFSWTAMINGYVENGDSDEALSLFRD 246
Query: 197 MVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKC 256
M + EP+ +++++VLPA + S + IHG+ ++ ++ + N LID Y+KC
Sbjct: 247 MQVIDGIEPNRVSLVSVLPACSSFSGLLSGRQIHGFAVRKELNN-EVSLCNALIDMYSKC 305
Query: 257 GCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLS 316
G + SA ++FED S+ K+ +SW+S+ISG+ +HG G+EA+ + +M + G++P+ +T +
Sbjct: 306 GSLDSARRVFEDDSL-CKDAISWSSMISGYGLHGKGQEAILLYDKMLQAGIRPDMITTVG 364
Query: 317 VLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSE 376
+L+ACS GLV EGLN + ++ + + P ++ + C++DMLGRAG+L+ A +P E
Sbjct: 365 ILSACSRSGLVNEGLNIYSSVINDYGIEPTLEIFACIVDMLGRAGQLDPALDFIKAMPVE 424
Query: 377 ITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERL 436
VW L+ HG++EM E R ++++E +YV + N+ A R+ +
Sbjct: 425 -PGPSVWGALVSCSIIHGDLEMQELAYRFLIQLEPENPSNYVSISNLYASSRRWDAVAEV 483
Query: 437 RRVMDERNAFKVPGCSLV 454
RR+M ++ KVPGCS +
Sbjct: 484 RRMMKDKRLRKVPGCSWI 501
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 87/370 (23%), Positives = 150/370 (40%), Gaps = 67/370 (18%)
Query: 92 LGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLV 151
L Q H+ I +G + + T L+ Y S +FD + +N+ WN
Sbjct: 41 LTRQSHSRILSLGLSQNSLLATKLIFAYAICQHPYHSRLVFDSLQHKNVFLWN------- 93
Query: 152 KWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITIL 211
+I+GY + NEA LF +M + + P + T+
Sbjct: 94 ------------------------SLINGYAKNRLYNEAFQLFNQMCSSDVL-PDDFTLS 128
Query: 212 AVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISV 271
+ + G + S + IHG + GF + D V N ++ Y KCG + K+F+++++
Sbjct: 129 TLSKVSSELGALFSGKSIHGKSIRIGFVS-DTVVANSIMSMYCKCGNFEESRKVFDEMTI 187
Query: 272 ER-----------------------------KNLVSWTSIISGFAMHGMGKEAVENFGRM 302
+N+ SWT++I+G+ +G EA+ F M
Sbjct: 188 RNSGSWNVLIAGYAVSGNLVVGRRVFDRMKCRNVFSWTAMINGYVENGDSDEALSLFRDM 247
Query: 303 QKV-GLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAG 361
Q + G++PNRV+ +SVL ACS + G V + E+ ++ LIDM + G
Sbjct: 248 QVIDGIEPNRVSLVSVLPACSSFSGLLSGRQIHGFAVRK-ELNNEVSLCNALIDMYSKCG 306
Query: 362 RLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMY 421
L+ A + S D + W +++ HG + + K+L+ G D +
Sbjct: 307 SLDSARRV-FEDDSLCKDAISWSSMISGYGLHGKGQEAILLYDKMLQA--GIRPDMITTV 363
Query: 422 NILAGVGRFG 431
IL+ R G
Sbjct: 364 GILSACSRSG 373
>gi|224057446|ref|XP_002299231.1| predicted protein [Populus trichocarpa]
gi|222846489|gb|EEE84036.1| predicted protein [Populus trichocarpa]
Length = 668
Score = 279 bits (714), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 156/421 (37%), Positives = 238/421 (56%), Gaps = 13/421 (3%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+N+L++ Y P++A +Y QQ+ T P D T ++ CA L LG
Sbjct: 223 WNSLINGYVRRRQPREAMGIY---QQMITEHVKP-----DEVTMIGVVSACAQLESLKLG 274
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
++H I + G + + AL++MYV G L+ LFD M ++ +V+W MI G K
Sbjct: 275 REIHRYIEESGLNLKISLVNALMDMYVKCGDLEAGKVLFDNMRKKTVVSWTTMIVGYAKN 334
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
G L+ A LF +MP +NVV+W +I + N S EAL LFR+M +P ++T+L
Sbjct: 335 GLLDMAGKLFHDMPEKNVVAWNAMIGSCVQANLSFEALELFREM-QWSNMKPDKVTMLHC 393
Query: 214 LPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVER 273
L A Q G + + H Y +K + D+ + LID YAKCG + A ++F ++ R
Sbjct: 394 LSACSQLGALDTGMWTHNYIKKHNLS-LDVALGTALIDMYAKCGNMTKALQVFNEMP--R 450
Query: 274 KNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNF 333
+N ++WT+II G A++G +A+ F +M GL P+ +TFL VL AC HGGLVEEG +
Sbjct: 451 RNSLTWTAIIGGLALYGNVNDAIFYFSKMIDSGLMPDEITFLGVLTACCHGGLVEEGRKY 510
Query: 334 FDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFH 393
FD+M + P KHY C++++LGRAG LE+AE+ +P E D +VW L AC H
Sbjct: 511 FDQMKSRFNLSPQPKHYSCMVNLLGRAGLLEEAEELIKTMPME-ADAMVWGALFFACGIH 569
Query: 394 GNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSL 453
N+ +GER K+L+++ G YVL+ N+ G++ +A+ +R++M ER K PG S
Sbjct: 570 RNLLIGERAASKLLDLDPHDSGIYVLLANMYREAGKWEEAQNIRKMMMERGVEKTPGSSS 629
Query: 454 V 454
+
Sbjct: 630 I 630
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 114/430 (26%), Positives = 204/430 (47%), Gaps = 78/430 (18%)
Query: 44 AESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKV 103
+E+PQK +LYK++ + + P D++TYSFL + CA L +G ++ + K+
Sbjct: 131 SENPQKGLVLYKRML-----TRAGCRP--DNYTYSFLFKVCANLVLSYMGFEILGQVLKM 183
Query: 104 GFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLF 163
GF +Y+ +++M VS+G + K+FDE R+LV+WN +I
Sbjct: 184 GFDKDMYLYNGIIHMLVSVGESGLAHKVFDEGCVRDLVSWNSLI---------------- 227
Query: 164 EEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDV 223
+GY R + EA+ ++++M+ E+ +P E+T++ V+ A Q +
Sbjct: 228 ---------------NGYVRRRQPREAMGIYQQMIT-EHVKPDEVTMIGVVSACAQLESL 271
Query: 224 KSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSII 283
K + IH Y E+ G I ++N L+D Y KCG + + LF+++ +K +VSWT++I
Sbjct: 272 KLGREIHRYIEESGLN-LKISLVNALMDMYVKCGDLEAGKVLFDNM--RKKTVVSWTTMI 328
Query: 284 SGFAMHGM----GK---------------------------EAVENFGRMQKVGLKPNRV 312
G+A +G+ GK EA+E F MQ +KP++V
Sbjct: 329 VGYAKNGLLDMAGKLFHDMPEKNVVAWNAMIGSCVQANLSFEALELFREMQWSNMKPDKV 388
Query: 313 TFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALG 372
T L L+ACS G ++ G+ + +++ + D+ LIDM + G + +A +
Sbjct: 389 TMLHCLSACSQLGALDTGM-WTHNYIKKHNLSLDVALGTALIDMYAKCGNMTKALQVFNE 447
Query: 373 IPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGD 432
+P + + W ++G + +GNV K++ + G D + +L G
Sbjct: 448 MPRR--NSLTWTAIIGGLALYGNVNDAIFYFSKMI--DSGLMPDEITFLGVLTACCHGGL 503
Query: 433 AERLRRVMDE 442
E R+ D+
Sbjct: 504 VEEGRKYFDQ 513
>gi|356522492|ref|XP_003529880.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g08510-like [Glycine max]
Length = 474
Score = 279 bits (714), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 158/433 (36%), Positives = 243/433 (56%), Gaps = 15/433 (3%)
Query: 27 LLHHSQ-----LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLI 81
+LHHS L+N L+ YS PQ + QI H P + T++FL
Sbjct: 2 VLHHSSKPTLFLYNKLIQAYS--SHPQHQHRCFSLYSQIRLHGFLP-----NQHTFNFLF 54
Query: 82 RTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLV 141
C +LS +LG LH K GF+ ++ TAL++MY +G L+ + KLFDEMP R +
Sbjct: 55 SACTSLSSSSLGQMLHTHFIKSGFEPDLFAATALLDMYAKVGALELARKLFDEMPVRGVP 114
Query: 142 TWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACE 201
WN M+ GL ++G+++ A LF MP RNVV WT +I GY+ + ++AL LF M +
Sbjct: 115 RWNAMMAGLARFGDMDGALELFXSMPSRNVVPWTTMISGYSWNKQYDKALGLFLGMEQEK 174
Query: 202 YTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFS 261
P+ +T++++LPA ++ Q + Y K GF + N +++ Y KCG I +
Sbjct: 175 GIMPNAVTLVSILPACANLXALEIGQRVEAYARKNGFFK-NXYASNAVLEMYVKCGKIDA 233
Query: 262 ASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNAC 321
A ++F +I R NL SW S++ G A+HG +A+E + +M G P+ VTF+ +L AC
Sbjct: 234 AWRVFNEIGSLR-NLCSWNSMVVGLAVHGECCKALELYDQMLGEGTSPDDVTFVGLLLAC 292
Query: 322 SHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVV 381
+ GG+V++G + F ++P ++HYGC++D+LGRAG+L +A + + S D V
Sbjct: 293 TQGGMVKKGRHIFKSKTTSFYIIPKLEHYGCMVDLLGRAGQLREAYEVIQSM-SMKPDSV 351
Query: 382 VWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMD 441
+W LLGACSFHGNVE+ E + +E G+YV++ NI A G++ +LR+VM
Sbjct: 352 IWGALLGACSFHGNVELAEIAAESLFVLEPWNPGNYVILSNIYASAGQWDGVAKLRKVMK 411
Query: 442 ERNAFKVPGCSLV 454
K G S +
Sbjct: 412 GSKITKSAGHSFI 424
>gi|449455158|ref|XP_004145320.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
gi|449470513|ref|XP_004152961.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
gi|449523079|ref|XP_004168552.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 733
Score = 279 bits (714), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 151/426 (35%), Positives = 244/426 (57%), Gaps = 22/426 (5%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+N+++ ++ P+ A L+ ++++ + +P +S T ++ CA G
Sbjct: 195 WNSMISAFAQGNCPEDALELFLKMER-----ENVMP---NSVTMVGVLSACAKKLDLEFG 246
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
+ + I + G + + + A+++MY G + D+ KLFDEMPER++ +W +M+ G K
Sbjct: 247 RWVCSYIERKGIKVDLTLCNAMLDMYTKCGSVDDAQKLFDEMPERDVFSWTIMLDGYAKM 306
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
G+ + AR +F MP + + +W +I Y + + EALA+F ++ + +P E+T+++
Sbjct: 307 GDYDAARLVFNAMPVKEIAAWNVLISAYEQNGKPKEALAIFNELQLSKIAKPDEVTLVST 366
Query: 214 LPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNC-----LIDTYAKCGCIFSASKLFED 268
L A Q G + IH Y ++ G VLNC L+D YAKCG + A ++F
Sbjct: 367 LSACAQLGAIDLGGWIHVYIKREGI------VLNCHLISSLVDMYAKCGSLEKALEVF-- 418
Query: 269 ISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVE 328
SVE +++ W+++I+G MHG GK A++ F MQ+ +KPN VTF +VL ACSH GLV+
Sbjct: 419 YSVEERDVYVWSAMIAGLGMHGRGKAAIDLFFEMQEAKVKPNSVTFTNVLCACSHAGLVD 478
Query: 329 EGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLG 388
EG FF +M V+P++KHY C++D+LGRAG LE+A + + S VW LLG
Sbjct: 479 EGRVFFHEMEPVYGVVPEMKHYACMVDILGRAGFLEEAMEL-INEMSTTPSASVWGALLG 537
Query: 389 ACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKV 448
ACS H NVE+GE + ++L++E G VL+ NI A GR+ LR++M + K
Sbjct: 538 ACSLHMNVELGELASDQLLKLEPRNHGAIVLLSNIYAKTGRWEKVSELRKLMRDTELKKE 597
Query: 449 PGCSLV 454
PGCS +
Sbjct: 598 PGCSSI 603
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 102/429 (23%), Positives = 186/429 (43%), Gaps = 77/429 (17%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+NTL+ Y+ + P ++F+++ L LP + FT+ F+I+ + L +G
Sbjct: 93 WNTLIRAYASSSDPFQSFVIFLDL----LDKCEDLP---NKFTFPFVIKAASELKASRVG 145
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
T +H + K+ F +Y+ +LV Y + G L + +LF + +++V+WN MI+
Sbjct: 146 TAVHGMAIKLSFGMDLYILNSLVRFYGACGDLSMAERLFKGISCKDVVSWNSMIS----- 200
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
+ + N +AL LF KM E P+ +T++ V
Sbjct: 201 --------------------------AFAQGNCPEDALELFLKMER-ENVMPNSVTMVGV 233
Query: 214 LPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDI---- 269
L A + D++ + + Y E++G D+ + N ++D Y KCG + A KLF+++
Sbjct: 234 LSACAKKLDLEFGRWVCSYIERKGIKV-DLTLCNAMLDMYTKCGSVDDAQKLFDEMPERD 292
Query: 270 -------------------------SVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQK 304
++ K + +W +IS + +G KEA+ F +Q
Sbjct: 293 VFSWTIMLDGYAKMGDYDAARLVFNAMPVKEIAAWNVLISAYEQNGKPKEALAIFNELQL 352
Query: 305 VGL-KPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRL 363
+ KP+ VT +S L+AC+ G ++ G + ++ ++ + L+DM + G L
Sbjct: 353 SKIAKPDEVTLVSTLSACAQLGAIDLG-GWIHVYIKREGIVLNCHLISSLVDMYAKCGSL 411
Query: 364 EQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEM-ERGYGGDYVLMYN 422
E+A + + E DV VW ++ HG G+ EM E + V N
Sbjct: 412 EKALEVFYSV--EERDVYVWSAMIAGLGMHGR---GKAAIDLFFEMQEAKVKPNSVTFTN 466
Query: 423 ILAGVGRFG 431
+L G
Sbjct: 467 VLCACSHAG 475
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 131/272 (48%), Gaps = 10/272 (3%)
Query: 131 LFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEA 190
FD L T + L + L++AR+LF+++P N+ +W +I Y + ++
Sbjct: 54 FFDPFSASKLFT----ASALSSFSTLDYARNLFDQIPQPNLYTWNTLIRAYASSSDPFQS 109
Query: 191 LALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLI 250
+F ++ P++ T V+ A + + +HG K F D+ +LN L+
Sbjct: 110 FVIFLDLLDKCEDLPNKFTFPFVIKAASELKASRVGTAVHGMAIKLSF-GMDLYILNSLV 168
Query: 251 DTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPN 310
Y CG + A +LF+ IS K++VSW S+IS FA ++A+E F +M++ + PN
Sbjct: 169 RFYGACGDLSMAERLFKGISC--KDVVSWNSMISAFAQGNCPEDALELFLKMERENVMPN 226
Query: 311 RVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTA 370
VT + VL+AC+ +E G + +E + D+ ++DM + G ++ A+K
Sbjct: 227 SVTMVGVLSACAKKLDLEFG-RWVCSYIERKGIKVDLTLCNAMLDMYTKCGSVDDAQKLF 285
Query: 371 LGIPSEITDVVVWRTLLGACSFHGNVEMGERV 402
+P DV W +L + G+ + V
Sbjct: 286 DEMPER--DVFSWTIMLDGYAKMGDYDAARLV 315
>gi|225444752|ref|XP_002278169.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 596
Score = 279 bits (713), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 157/425 (36%), Positives = 251/425 (59%), Gaps = 16/425 (3%)
Query: 33 LFNTLLHFYSLAESPQK---AFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSH 89
LFNT + +S A P + LL+ ++ + L P ++FT++FL + C+
Sbjct: 56 LFNTTIRGFSRARRPGSLLSSVLLFVRMGVL------SLAP--NNFTFTFLFQGCSNCVA 107
Query: 90 PNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITG 149
+LG Q H ++ K F+ V+V +++ Y G L D+ +FDE E ++V+WN MI G
Sbjct: 108 FDLGRQFHGMVIKNSFEMDVFVRNSIIRFYSVCGRLNDARWVFDESSELDVVSWNSMIDG 167
Query: 150 LVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEIT 209
++ G + A SLF +M RN +SW +I GY + + EALALFR+M + EP+
Sbjct: 168 CIRNGNILEALSLFSKMTERNDISWNMMISGYAQNGQPKEALALFREMQMLD-QEPNSAI 226
Query: 210 ILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDI 269
+++VL A Q G + +H Y K+ D + LID YAKCG I A + F
Sbjct: 227 LVSVLSACSQLGALDHGCWVHCYIGKKCVRV-DSILSAALIDMYAKCGSIDLAMQAFS-- 283
Query: 270 SVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEE 329
+ ++++ ++T+ ISG AM+G +EA++ F +M+ G+ P+ V++++VL ACSH G VE+
Sbjct: 284 TSRKRDVSAYTAAISGLAMNGCSEEALQLFEQMKGEGISPDGVSYIAVLCACSHAGWVEK 343
Query: 330 GLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGA 389
G ++F M + + P++ HY C++D+LGRAG LE+AEK +P + D V+W LLGA
Sbjct: 344 GFHYFASMSDVHGIRPELDHYACMVDLLGRAGLLEEAEKFVASMPIK-PDNVIWGALLGA 402
Query: 390 CSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVP 449
C +GN EMG+RV ++E ++ + G Y+L+ NI A + DAE++R+ M R +VP
Sbjct: 403 CRVYGNAEMGQRVGSLLVESDQNHDGRYILLSNIYAESMKGEDAEQVRKTMRRRKVDRVP 462
Query: 450 GCSLV 454
GCSL+
Sbjct: 463 GCSLI 467
>gi|224106277|ref|XP_002314110.1| predicted protein [Populus trichocarpa]
gi|222850518|gb|EEE88065.1| predicted protein [Populus trichocarpa]
Length = 738
Score = 279 bits (713), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 150/421 (35%), Positives = 245/421 (58%), Gaps = 12/421 (2%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+N+++ + SP++A L+K+++ + P + T ++ CA G
Sbjct: 200 WNSMISGFVQGGSPEEALQLFKRMKM---ENARP-----NRVTMVGVLSACAKRIDLEFG 251
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
I + G ++ ++ A+++MYV G L+D+ +LFD+M E+++V+W MI G K
Sbjct: 252 RWACDYIERNGIDINLILSNAMLDMYVKCGSLEDARRLFDKMEEKDIVSWTTMIDGYAKV 311
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
G+ + AR +F+ MP ++ +W +I Y + + EALA+FR++ + T+P+E+T+ +
Sbjct: 312 GDYDAARRVFDVMPREDITAWNALISSYQQNGKPKEALAIFRELQLNKNTKPNEVTLAST 371
Query: 214 LPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVER 273
L A Q G + IH Y +K+G + + LID Y+KCG + A ++F SVER
Sbjct: 372 LAACAQLGAMDLGGWIHVYIKKQGIK-LNFHITTSLIDMYSKCGHLEKALEVF--YSVER 428
Query: 274 KNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNF 333
+++ W+++I+G AMHG G+ A++ F +MQ+ +KPN VTF ++L ACSH GLV+EG F
Sbjct: 429 RDVFVWSAMIAGLAMHGHGRAAIDLFSKMQETKVKPNAVTFTNLLCACSHSGLVDEGRLF 488
Query: 334 FDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFH 393
F++M V+P KHY C++D+LGRAG LE+A + +P + VW LLGAC +
Sbjct: 489 FNQMRPVYGVVPGSKHYACMVDILGRAGCLEEAVELIEKMPI-VPSASVWGALLGACRIY 547
Query: 394 GNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSL 453
GNVE+ E ++LE + G YVL+ NI A G++ RLR+ M K PGCS
Sbjct: 548 GNVELAEMACSRLLETDSNNHGAYVLLSNIYAKAGKWDCVSRLRQHMKVSGLEKEPGCSS 607
Query: 454 V 454
+
Sbjct: 608 I 608
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 99/367 (26%), Positives = 177/367 (48%), Gaps = 23/367 (6%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+NTL+ ++ + P + L++ Q+ H P +S+T+ F+I+ +S G
Sbjct: 98 WNTLIRAFASSPKPIQGLLVFIQM----LHESQRFP---NSYTFPFVIKAATEVSSLLAG 150
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
+H ++ K F S ++++ +L++ Y SLG L + +F ++ E+++V+WN MI+G V+
Sbjct: 151 QAIHGMVMKASFGSDLFISNSLIHFYSSLGDLDSAYLVFSKIVEKDIVSWNSMISGFVQG 210
Query: 154 GELEFARSLFEEMPCRNV----VSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEIT 209
G E A LF+ M N V+ G++ + + L AC+Y E + I
Sbjct: 211 GSPEEALQLFKRMKMENARPNRVTMVGVLSACAKR------IDLEFGRWACDYIERNGID 264
Query: 210 ILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDI 269
I +L + VK L DI +ID YAK G +A ++F+
Sbjct: 265 INLILSNAMLDMYVKCGSLEDARRLFDKMEEKDIVSWTTMIDGYAKVGDYDAARRVFD-- 322
Query: 270 SVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQ-KVGLKPNRVTFLSVLNACSHGGLVE 328
+ R+++ +W ++IS + +G KEA+ F +Q KPN VT S L AC+ G ++
Sbjct: 323 VMPREDITAWNALISSYQQNGKPKEALAIFRELQLNKNTKPNEVTLASTLAACAQLGAMD 382
Query: 329 EGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLG 388
G + +++ + + LIDM + G LE+A + + E DV VW ++
Sbjct: 383 LG-GWIHVYIKKQGIKLNFHITTSLIDMYSKCGHLEKALEVFYSV--ERRDVFVWSAMIA 439
Query: 389 ACSFHGN 395
+ HG+
Sbjct: 440 GLAMHGH 446
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 100/396 (25%), Positives = 161/396 (40%), Gaps = 88/396 (22%)
Query: 76 TYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSS-----K 130
T LI CA H QLHA + + G + + ++ + SS K
Sbjct: 32 TVPILIDKCANKKHLK---QLHAHMLRTGL---FFDPPSATKLFTACALSSPSSLDYACK 85
Query: 131 LFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEA 190
+FD++P NL TWN +I FA S + +
Sbjct: 86 VFDQIPRPNLYTWNTLIRA--------FASS-----------------------PKPIQG 114
Query: 191 LALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLI 250
L +F +M+ P+ T V+ A + + + Q IHG K F + D+ + N LI
Sbjct: 115 LLVFIQMLHESQRFPNSYTFPFVIKAATEVSSLLAGQAIHGMVMKASFGS-DLFISNSLI 173
Query: 251 DTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPN 310
Y+ G + SA +F I VE K++VSW S+ISGF G +EA++ F RM+ +PN
Sbjct: 174 HFYSSLGDLDSAYLVFSKI-VE-KDIVSWNSMISGFVQGGSPEEALQLFKRMKMENARPN 231
Query: 311 RVTFLSVLNACSHG-----------------------------------GLVEEGLNFFD 335
RVT + VL+AC+ G +E+ FD
Sbjct: 232 RVTMVGVLSACAKRIDLEFGRWACDYIERNGIDINLILSNAMLDMYVKCGSLEDARRLFD 291
Query: 336 KMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGN 395
KM E+ DI + +ID + G + A + +P E D+ W L+ + +G
Sbjct: 292 KMEEK-----DIVSWTTMIDGYAKVGDYDAARRVFDVMPRE--DITAWNALISSYQQNGK 344
Query: 396 VEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFG 431
+ + R+ L++ + + V + + LA + G
Sbjct: 345 PKEALAIFRE-LQLNKNTKPNEVTLASTLAACAQLG 379
>gi|297810761|ref|XP_002873264.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297319101|gb|EFH49523.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 624
Score = 279 bits (713), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 151/422 (35%), Positives = 250/422 (59%), Gaps = 13/422 (3%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNL 92
+FN L+ +S P KAF Y Q+ + S + P D+ T+ FLI+ + +
Sbjct: 86 VFNVLIRCFSTGAEPSKAFGFYTQMLK------SRIWP--DNITFPFLIKASTEMECVVV 137
Query: 93 GTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVK 152
G Q H+ I + GFQ+ VYV +LV+MY + G + + ++F +MP R++V+W M+ G K
Sbjct: 138 GEQTHSQIVRFGFQNDVYVENSLVHMYANCGLIAAAGRIFGQMPFRDVVSWTSMVAGYCK 197
Query: 153 WGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILA 212
G +E AR +F+EMP RN+ +W+ +I+GY + N +A+ LF +++ E +E +++
Sbjct: 198 CGMVEDAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLF-ELMKREGVVANETVMVS 256
Query: 213 VLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVE 272
V+ + G ++ + H Y K T ++ + L+D Y +CG I A ++FE++
Sbjct: 257 VISSCAHLGALEFGERAHEYVVKSHMTV-NLILGTALVDMYWRCGEIEKAIRVFEELP-- 313
Query: 273 RKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLN 332
K+ +SW+SII G A+HG +A+ F +M ++G P +T +VL+ACSHGGLV++GL
Sbjct: 314 DKDSLSWSSIIKGLAVHGHAHKAIHYFSQMVRLGFSPRDITLTAVLSACSHGGLVDKGLE 373
Query: 333 FFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSF 392
++ M + + P ++HYGC++DMLGRAG+L +AE L +P + + + LLGAC
Sbjct: 374 IYENMKRDYGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMPVK-PNAPILGALLGACKI 432
Query: 393 HGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCS 452
+ N E+ ERV ++E++ + G YVL+ NI A G++ E LR +M E+ K PG S
Sbjct: 433 YKNTEVAERVGNMLIEVKPEHSGYYVLLSNIYACAGQWEKLESLRDIMKEKLVKKPPGWS 492
Query: 453 LV 454
L+
Sbjct: 493 LI 494
>gi|356529553|ref|XP_003533355.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Glycine max]
Length = 540
Score = 279 bits (713), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 154/429 (35%), Positives = 244/429 (56%), Gaps = 20/429 (4%)
Query: 34 FNTLLHFYSLAESPQ-----KAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLS 88
+N ++ Y ES KA +LYKQ+ + P + T+ FL++ C
Sbjct: 89 YNIMIRAYISMESGDDTHFCKALMLYKQM---FCKDIVP-----NCLTFPFLLKGCTQWL 140
Query: 89 HPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMIT 148
G +H + K GF VYV +L+++Y++ G L ++ K+FDEM ++VTWN M+
Sbjct: 141 DGATGQAIHTQVIKFGFLKDVYVANSLISLYMAGGLLSNARKVFDEMLVTDVVTWNSMVI 200
Query: 149 GLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKM--VACEYTEPS 206
G ++ G L+ A LF +M RN+++W II G + + E+L LF +M ++ + +P
Sbjct: 201 GCLRNGGLDMAMDLFRKMNGRNIITWNSIITGLAQGGSAKESLELFHEMQILSDDMVKPD 260
Query: 207 EITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLF 266
+ITI +VL A Q G + + +HGY + G D+ + L++ Y KCG + A ++F
Sbjct: 261 KITIASVLSACAQLGAIDHGKWVHGYLRRNGIEC-DVVIGTALVNMYGKCGDVQKAFEIF 319
Query: 267 EDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGL 326
E++ K+ +WT +IS FA+HG+G +A F M+K G+KPN VTF+ +L+AC+H GL
Sbjct: 320 EEMP--EKDASAWTVMISVFALHGLGWKAFNCFLEMEKAGVKPNHVTFVGLLSACAHSGL 377
Query: 327 VEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTL 386
VE+G FD M + P + HY C++D+L RA +++E +P + DV VW L
Sbjct: 378 VEQGRWCFDVMKRVYSIEPQVYHYACMVDILSRARLFDESEILIRSMPMK-PDVYVWGAL 436
Query: 387 LGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDE-RNA 445
LG C HGNVE+GE+V ++++E YV +I A G F A+R+R +M E R
Sbjct: 437 LGGCQMHGNVELGEKVVHHLIDLEPHNHAFYVNWCDIYAKAGMFDAAKRIRNIMKEKRIE 496
Query: 446 FKVPGCSLV 454
K+PGCS++
Sbjct: 497 KKIPGCSMI 505
>gi|224099171|ref|XP_002311390.1| predicted protein [Populus trichocarpa]
gi|222851210|gb|EEE88757.1| predicted protein [Populus trichocarpa]
Length = 594
Score = 279 bits (713), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 157/468 (33%), Positives = 256/468 (54%), Gaps = 47/468 (10%)
Query: 21 LLTTNSLLHHSQLFNTLLHFYSLAESPQKAFLLYKQL--QQIYTHSHSPLPPLFDSFTYS 78
L T + +S ++ T++ Y+ +P++AF Y ++ Q Y + + FT++
Sbjct: 88 LFDTVDIPRNSFMYTTMIKAYANFGNPREAFAFYSRMLCDQRYVYP--------NDFTFT 139
Query: 79 FLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTAL----------------------- 115
++ C+ + G Q HA + K F+ V+ +L
Sbjct: 140 YVFSACSKFNGVFEGKQAHAQMIKFPFEFGVHSWNSLLDFYGKVGEVGIVVRRVFDKIEG 199
Query: 116 ---------VNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEM 166
+N YV G L ++ +LFDEMPER++V+W +M+ G G L A LF+EM
Sbjct: 200 PDVVSWNCLINGYVKSGDLDEARRLFDEMPERDVVSWTIMLVGYADAGFLSEASCLFDEM 259
Query: 167 PCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSC 226
P RN+VSW+ +I GY ++ ++AL LF++M + + E+ + +L A + G +
Sbjct: 260 PKRNLVSWSALIKGYIQIGCYSKALELFKEMQVAK-VKMDEVIVTTLLSACARLGALDQG 318
Query: 227 QLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGF 286
+ +H Y +K G D + LID Y+KCG I A K+F++ K + W+S+I G
Sbjct: 319 RWLHMYIDKHGIKV-DAHLSTALIDMYSKCGRIDMAWKVFQETG--DKKVFVWSSMIGGL 375
Query: 287 AMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPD 346
AMH G++A+E F +M + G++P+ +T++++L AC+H GLV+ GL F++MVE + P
Sbjct: 376 AMHSFGEKAIELFAKMIECGIEPSEITYINILAACTHSGLVDVGLQIFNRMVENQKPKPR 435
Query: 347 IKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKI 406
++HYGC++D+LGRAG L A + +P + D +WR LL AC H NVE+GE+V R +
Sbjct: 436 MQHYGCIVDLLGRAGLLHDAFRVVETMPVK-ADPAIWRALLSACKLHRNVELGEQVGRIL 494
Query: 407 LEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
++ME +YVL N+ A V R+ + +LRR M R K PGCS +
Sbjct: 495 IKMEPQNDMNYVLFSNVYAAVNRWDISGKLRREMKVRGMQKNPGCSSI 542
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 85/344 (24%), Positives = 144/344 (41%), Gaps = 75/344 (21%)
Query: 154 GELEFARSLFE--EMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACE-YTEPSEITI 210
G L +A+ LF+ ++P RN +T +I Y EA A + +M+ + Y P++ T
Sbjct: 80 GSLNYAQKLFDTVDIP-RNSFMYTTMIKAYANFGNPREAFAFYSRMLCDQRYVYPNDFTF 138
Query: 211 LAVLPAIWQ-NGDVKSCQ-------------------LIHGYGE--------KRGFTAF- 241
V A + NG + Q L+ YG+ +R F
Sbjct: 139 TYVFSACSKFNGVFEGKQAHAQMIKFPFEFGVHSWNSLLDFYGKVGEVGIVVRRVFDKIE 198
Query: 242 --DIRVLNCLIDTYAKCGCIFSASKLFEDI-----------------------------S 270
D+ NCLI+ Y K G + A +LF+++
Sbjct: 199 GPDVVSWNCLINGYVKSGDLDEARRLFDEMPERDVVSWTIMLVGYADAGFLSEASCLFDE 258
Query: 271 VERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEG 330
+ ++NLVSW+++I G+ G +A+E F MQ +K + V ++L+AC+ G +++G
Sbjct: 259 MPKRNLVSWSALIKGYIQIGCYSKALELFKEMQVAKVKMDEVIVTTLLSACARLGALDQG 318
Query: 331 LNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITD--VVVWRTLLG 388
+ +++ + D LIDM + GR++ A K + E D V VW +++G
Sbjct: 319 -RWLHMYIDKHGIKVDAHLSTALIDMYSKCGRIDMAWK----VFQETGDKKVFVWSSMIG 373
Query: 389 ACSFHGNVEMGERVTRKILEM-ERGYGGDYVLMYNILAGVGRFG 431
+ H GE+ +M E G + NILA G
Sbjct: 374 GLAMHS---FGEKAIELFAKMIECGIEPSEITYINILAACTHSG 414
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 75/169 (44%), Gaps = 36/169 (21%)
Query: 252 TYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRM--QKVGLKP 309
++ G + A KLF+ + + R + + +T++I +A G +EA + RM + + P
Sbjct: 75 SFDNLGSLNYAQKLFDTVDIPRNSFM-YTTMIKAYANFGNPREAFAFYSRMLCDQRYVYP 133
Query: 310 NRVTFLSVLNACSHGGLVEEG----------------------LNFFDKMVEECEVL--- 344
N TF V +ACS V EG L+F+ K+ E V+
Sbjct: 134 NDFTFTYVFSACSKFNGVFEGKQAHAQMIKFPFEFGVHSWNSLLDFYGKVGEVGIVVRRV 193
Query: 345 ------PDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLL 387
PD+ + CLI+ ++G L++A + +P DVV W +L
Sbjct: 194 FDKIEGPDVVSWNCLINGYVKSGDLDEARRLFDEMPER--DVVSWTIML 240
>gi|147806113|emb|CAN65480.1| hypothetical protein VITISV_030746 [Vitis vinifera]
Length = 686
Score = 279 bits (713), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 155/484 (32%), Positives = 254/484 (52%), Gaps = 74/484 (15%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNL 92
L+N++ Y+ +ES ++ L+ Q++ + + FT+ ++++C ++
Sbjct: 166 LWNSMFRGYAQSESYREVVFLFFQMKGMDIRP--------NCFTFPVVLKSCGKINALIE 217
Query: 93 GTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEM----------------- 135
G Q+H + K GF+ + +V T L++MY + G + D+ K+F EM
Sbjct: 218 GEQVHCFLIKCGFRGNPFVGTTLIDMYSAGGTVGDAYKIFCEMFERNVVAWTSMINGYIL 277
Query: 136 --------------PERNLVTWNVMITGLVKWGELEFARSLF------------------ 163
PER++V WN+M++G ++ G++ AR LF
Sbjct: 278 SADLVSARRLFDLAPERDVVLWNIMVSGYIEGGDMVEARKLFXEMPNRDVMFWNTVLKGY 337
Query: 164 -------------EEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITI 210
EEMP RN+ SW +I GY E L F++M++ P++ T+
Sbjct: 338 ATNGNVEALEGLFEEMPERNIFSWNALIGGYAHNGLFFEVLGSFKRMLSESDVPPNDATL 397
Query: 211 LAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDIS 270
+ VL A + G + + +H Y E G ++ V N L+D YAKCG I +A +F
Sbjct: 398 VTVLSACARLGALDLGKWVHVYAESSGLKG-NVYVGNALMDMYAKCGIIENAISVFR--G 454
Query: 271 VERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEG 330
++ K+L+SW ++I G AMH G +A+ F +M+ G KP+ +TF+ +L AC+H GLVE+G
Sbjct: 455 MDTKDLISWNTLIGGLAMHSRGADALNLFFQMKNAGQKPDGITFIGILCACTHMGLVEDG 514
Query: 331 LNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGAC 390
+F M ++ ++P I+HYGC++DML RAGRLEQA +P E D V+W LLGAC
Sbjct: 515 FAYFQSMADDYLIMPQIEHYGCMVDMLARAGRLEQAXAFVRKMPVE-ADGVIWAGLLGAC 573
Query: 391 SFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPG 450
+ NVE+ E ++++E+E +YV++ NI GR+ D RL+ M + K+PG
Sbjct: 574 RIYKNVELAELALQRLIELEPKNPANYVMLSNIYGDAGRWEDVARLKVAMRDTGFKKLPG 633
Query: 451 CSLV 454
CSL+
Sbjct: 634 CSLI 637
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 96/454 (21%), Positives = 177/454 (38%), Gaps = 86/454 (18%)
Query: 15 TQIHSHLLTTNSLLHHSQLFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDS 74
T +S + SL H S F + F+SL+ P+ + S L P S
Sbjct: 31 TSNYSQTIPVFSLFHLSNSFPKIW-FFSLSGQPKLQPIYIGLESHPLKQSSHGLNPCGRS 89
Query: 75 FTYSFLIRTCA------TLSHPNLGTQLHAVISKV---GFQSHVYVNTALVNMYVSLGFL 125
T +R A + Q+H + +++ GFQ + Y+ LV + +L +
Sbjct: 90 PTGGGHLRLTALRCLRENMRSCKTSKQVHQIQAQIIANGFQYNEYITPKLVTICATLKRM 149
Query: 126 KDSSKLFDEMPERNLVTWNVMITGLVK---WGELEFARSLFEEMPCR------------- 169
+ +LFD++P+ N+ WN M G + + E+ F + M R
Sbjct: 150 TYARQLFDQIPDPNIALWNSMFRGYAQSESYREVVFLFFQMKGMDIRPNCFTFPVVLKSC 209
Query: 170 -----------------------NVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPS 206
N T +ID Y+ +A +F CE E +
Sbjct: 210 GKINALIEGEQVHCFLIKCGFRGNPFVGTTLIDMYSAGGTVGDAYKIF-----CEMFERN 264
Query: 207 EITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRV--------------------- 245
+ +++ + D+ S + + +R ++I V
Sbjct: 265 VVAWTSMINGYILSADLVSARRLFDLAPERDVVLWNIMVSGYIEGGDMVEARKLFXEMPN 324
Query: 246 -----LNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFG 300
N ++ YA G + + LFE++ +N+ SW ++I G+A +G+ E + +F
Sbjct: 325 RDVMFWNTVLKGYATNGNVEALEGLFEEMP--ERNIFSWNALIGGYAHNGLFFEVLGSFK 382
Query: 301 RM-QKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGR 359
RM + + PN T ++VL+AC+ G ++ G + E + ++ L+DM +
Sbjct: 383 RMLSESDVPPNDATLVTVLSACARLGALDLG-KWVHVYAESSGLKGNVYVGNALMDMYAK 441
Query: 360 AGRLEQAEKTALGIPSEITDVVVWRTLLGACSFH 393
G +E A G+ + D++ W TL+G + H
Sbjct: 442 CGIIENAISVFRGM--DTKDLISWNTLIGGLAMH 473
>gi|224126329|ref|XP_002329527.1| predicted protein [Populus trichocarpa]
gi|222870236|gb|EEF07367.1| predicted protein [Populus trichocarpa]
Length = 377
Score = 278 bits (712), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 142/339 (41%), Positives = 215/339 (63%), Gaps = 6/339 (1%)
Query: 118 MYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGI 177
MY G L + K+FDEMP +N++ W M++G V +GEL+ AR LFE P ++VV WT +
Sbjct: 1 MYCKCGCLSVARKIFDEMPHKNVICWTSMVSGYVNYGELDKARELFERSPVKDVVLWTAM 60
Query: 178 IDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRG 237
I+GY + N +EA+ALF++M + +P + ++A+L Q G ++ IHGY +++G
Sbjct: 61 INGYVQFNHFDEAVALFQEM-QIQRVKPDKFVLVALLTGCAQMGALEQGTWIHGYIDEKG 119
Query: 238 FTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVE 297
D V LI+ Y+KCGCI A ++F + K+ +WTSII G AM+G +A+E
Sbjct: 120 IPV-DAVVGTSLIEMYSKCGCIEKALRIF--CGLREKDTATWTSIICGLAMNGKTSKALE 176
Query: 298 NFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDML 357
F +M++V P+ VTF+ VL+ACSHGGLVEEG FF+ M + P ++HYGCLID+L
Sbjct: 177 LFSKMKQVEAIPDEVTFIGVLSACSHGGLVEEGREFFNSMTSIYNIEPKLEHYGCLIDLL 236
Query: 358 GRAGRLEQAEKTALGIPSEITDVVV--WRTLLGACSFHGNVEMGERVTRKILEMERGYGG 415
GRAG+L++AE+ I + +++V + +LL AC + NV+MGERV +++++E
Sbjct: 237 GRAGQLDEAEELIKKIVNANNEIIVPLYGSLLSACRIYKNVQMGERVAEQLVKIESRDSS 296
Query: 416 DYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
+ L+ NI A GR+ D R+RR M + KVPGCS +
Sbjct: 297 VHTLLANIYASAGRWVDVNRVRREMKDLGVKKVPGCSSI 335
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 59/137 (43%), Gaps = 4/137 (2%)
Query: 73 DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLF 132
D F L+ CA + GT +H I + G V T+L+ MY G ++ + ++F
Sbjct: 88 DKFVLVALLTGCAQMGALEQGTWIHGYIDEKGIPVDAVVGTSLIEMYSKCGCIEKALRIF 147
Query: 133 DEMPERNLVTWNVMITGLVKWGELEFARSLFEEM----PCRNVVSWTGIIDGYTRMNRSN 188
+ E++ TW +I GL G+ A LF +M + V++ G++ +
Sbjct: 148 CGLREKDTATWTSIICGLAMNGKTSKALELFSKMKQVEAIPDEVTFIGVLSACSHGGLVE 207
Query: 189 EALALFRKMVACEYTEP 205
E F M + EP
Sbjct: 208 EGREFFNSMTSIYNIEP 224
>gi|296087368|emb|CBI33742.3| unnamed protein product [Vitis vinifera]
Length = 562
Score = 278 bits (712), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 154/408 (37%), Positives = 231/408 (56%), Gaps = 39/408 (9%)
Query: 78 SFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLK----------- 126
+ LI T+SH Q+HAV+ + G H +N L Y SLG L
Sbjct: 34 AVLIDKSKTISHL---LQIHAVLFRHGLDHHPILNFKLQRSYASLGRLDYSVALFGRTQN 90
Query: 127 --------------------DSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEM 166
+ +LFD MPE++LV+ M+T K GEL+ AR LF+ M
Sbjct: 91 PSVFFWTAIIHGHALRGDVVSAQQLFDTMPEKSLVSLTAMLTCYAKHGELDAARVLFDGM 150
Query: 167 PCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSC 226
R+ V W +IDGYT+ NEAL LFR+M+ + +P+E+T+L+VL A Q G ++S
Sbjct: 151 EERDGVCWNVMIDGYTQNGMPNEALVLFRRMLKAK-AKPNEVTVLSVLSACGQLGALESG 209
Query: 227 QLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGF 286
+ +H Y E G F++ V L+D Y+KCG + A +F+ I + K++V+W S+I G+
Sbjct: 210 RWVHSYIENNGIQ-FNVHVGTALVDMYSKCGSLEDARLVFDKI--DDKDVVAWNSMIVGY 266
Query: 287 AMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPD 346
AMHG +EA++ F M ++GL P +TF+ +L+AC H G V EG + F+KM +E + P
Sbjct: 267 AMHGFSQEALQLFKSMCRMGLHPTNITFIGILSACGHSGWVTEGWDIFNKMKDEYGIEPK 326
Query: 347 IKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKI 406
I+HYGC++++LGRAG +EQA + + E D V+W TLLGAC HG + +GE++ +
Sbjct: 327 IEHYGCMVNLLGRAGHVEQAYELVKNMNIE-PDPVLWGTLLGACRLHGKIALGEKIVELL 385
Query: 407 LEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
++ G Y+L+ NI A VG + RLR +M + K PGCS +
Sbjct: 386 VDQNLANSGTYILLSNIYAAVGNWDGVARLRTMMKDSGVKKEPGCSSI 433
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 117/268 (43%), Gaps = 46/268 (17%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+N ++ Y+ P +A +L++++ + + P + T ++ C L G
Sbjct: 158 WNVMIDGYTQNGMPNEALVLFRRMLK------AKAKP--NEVTVLSVLSACGQLGALESG 209
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
+H+ I G Q +V+V TALV+MY G L+D+ +FD++ ++++V WN MI
Sbjct: 210 RWVHSYIENNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKIDDKDVVAWNSMIV----- 264
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEY-TEPSEITILA 212
GY S EAL LF+ M C P+ IT +
Sbjct: 265 --------------------------GYAMHGFSQEALQLFKSM--CRMGLHPTNITFIG 296
Query: 213 VLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVE 272
+L A +G V I + I C+++ + G + A +L +++++E
Sbjct: 297 ILSACGHSGWVTEGWDIFNKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQAYELVKNMNIE 356
Query: 273 RKNLVSWTSIISGFAMHG---MGKEAVE 297
+ V W +++ +HG +G++ VE
Sbjct: 357 -PDPVLWGTLLGACRLHGKIALGEKIVE 383
>gi|224064340|ref|XP_002301427.1| predicted protein [Populus trichocarpa]
gi|222843153|gb|EEE80700.1| predicted protein [Populus trichocarpa]
Length = 442
Score = 278 bits (712), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 147/386 (38%), Positives = 226/386 (58%), Gaps = 5/386 (1%)
Query: 69 PPLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDS 128
PP + T++FL CA+ G +H K GF VY TALV+MY LG L +
Sbjct: 7 PP--NELTFTFLFPACASFYSLLHGKVIHTHFIKSGFDFDVYALTALVDMYAKLGVLMLA 64
Query: 129 SKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSN 188
++FDEM R++ TWN +I G + G++E A LF+ MP R+VVSWT +I GY++
Sbjct: 65 RQVFDEMTVRDIPTWNSLIAGYSRSGDMEGALELFKLMPSRSVVSWTTMISGYSQNGMYT 124
Query: 189 EALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNC 248
+AL +F KM + P+E+TI +V A + G ++ + I Y G ++ V N
Sbjct: 125 KALEMFLKMEKDKEVRPNEVTIASVFSACAKLGALEVGERIESYARDNGLMK-NLYVSNT 183
Query: 249 LIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLK 308
L++ YA+CG I +A +F +I +R+NL SW S++ G A+HG EA++ + +M G++
Sbjct: 184 LLEMYARCGKIDAARHVFNEIG-KRRNLCSWNSMMMGLAVHGRSNEALQLYDQMLGEGIE 242
Query: 309 PNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEK 368
P+ VTF+ ++ AC+HGGLV +G F M ++P ++HYGC++D+LGRAG L++A
Sbjct: 243 PDDVTFVGLILACTHGGLVAKGWQLFQSMETNFSIVPKLEHYGCMVDLLGRAGELQEAYD 302
Query: 369 TALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVG 428
+P + D V+W TLLGACSFH NVE E + ++E G+YV++ NI A
Sbjct: 303 LVKSMPMK-PDSVIWGTLLGACSFHSNVEFAEIAAESLFQVEPWNPGNYVILCNIYASAQ 361
Query: 429 RFGDAERLRRVMDERNAFKVPGCSLV 454
R+ +LR++M K G S++
Sbjct: 362 RWDGVAKLRKLMKGGQITKAAGYSVI 387
>gi|15241651|ref|NP_196468.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171895|sp|Q9FNN7.1|PP371_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g08510
gi|9759345|dbj|BAB10000.1| unnamed protein product [Arabidopsis thaliana]
gi|50897238|gb|AAT85758.1| At5g08510 [Arabidopsis thaliana]
gi|332003930|gb|AED91313.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 511
Score = 278 bits (712), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 168/460 (36%), Positives = 254/460 (55%), Gaps = 23/460 (5%)
Query: 12 NITTQIHSHLL-----TTNSLLHHSQLFNTLLHFYSLAESPQKA-FLLYKQLQQIYTHSH 65
N Q+H+H L T LL L L++ L + Q + LY +L Q Y H
Sbjct: 2 NGIKQLHAHCLRTGVDETKDLLQRLLLIPNLVYARKLFDHHQNSCTFLYNKLIQAYYVHH 61
Query: 66 SPLPPL-------FDSF-----TYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNT 113
P + FD T++F+ A+ S LH+ + GF+S + T
Sbjct: 62 QPHESIVLYNLLSFDGLRPSHHTFNFIFAASASFSSARPLRLLHSQFFRSGFESDSFCCT 121
Query: 114 ALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVS 173
L+ Y LG L + ++FDEM +R++ WN MITG + G+++ A LF+ MP +NV S
Sbjct: 122 TLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQRRGDMKAAMELFDSMPRKNVTS 181
Query: 174 WTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYG 233
WT +I G+++ +EAL +F M + +P+ IT+++VLPA G+++ + + GY
Sbjct: 182 WTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELEIGRRLEGYA 241
Query: 234 EKRGFTAFD-IRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMG 292
+ GF FD I V N I+ Y+KCG I A +LFE++ +R NL SW S+I A HG
Sbjct: 242 RENGF--FDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQR-NLCSWNSMIGSLATHGKH 298
Query: 293 KEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGC 352
EA+ F +M + G KP+ VTF+ +L AC HGG+V +G F M E ++ P ++HYGC
Sbjct: 299 DEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQELFKSMEEVHKISPKLEHYGC 358
Query: 353 LIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERG 412
+ID+LGR G+L++A +P + D VVW TLLGACSFHGNVE+ E + + ++E
Sbjct: 359 MIDLLGRVGKLQEAYDLIKTMPMK-PDAVVWGTLLGACSFHGNVEIAEIASEALFKLEPT 417
Query: 413 YGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCS 452
G+ V+M NI A ++ R+R++M + K G S
Sbjct: 418 NPGNCVIMSNIYAANEKWDGVLRMRKLMKKETMTKAAGYS 457
>gi|359484088|ref|XP_002263394.2| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic [Vitis vinifera]
Length = 762
Score = 278 bits (712), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 167/501 (33%), Positives = 258/501 (51%), Gaps = 80/501 (15%)
Query: 21 LLTTNSLLHHSQ-----LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSF 75
L ++ HH Q L+N+L+ S +++P +A LY + Q S L P D
Sbjct: 145 LAYAKTIFHHLQNPPPSLYNSLIRALSSSKTPLEALPLYHTMLQ------SGLKP--DHM 196
Query: 76 TYSFLIRTCATLSHPNLGTQLHAVISKVGFQS---------HVYVN-------------- 112
TY F+I+ C S G +H + K GF+ H+Y N
Sbjct: 197 TYPFVIKACNESSVTWFGLLVHTHVVKSGFECDSYIVSSLIHLYANGKDLGAAKQLFNLC 256
Query: 113 ---------------------------------------TALVNMYVSLGFLKDSSKLFD 133
++N Y +G + ++ +LFD
Sbjct: 257 SARDVVSWNAMIDGYVKHVEMGHARMVFDRMVCRDVISWNTMINGYAIVGKIDEAKRLFD 316
Query: 134 EMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALAL 193
EMPERNLV+WN M+ G VK G +E A LF EMPCR+VVSW ++ Y + + NEALAL
Sbjct: 317 EMPERNLVSWNSMLAGFVKCGNVEDAFGLFSEMPCRDVVSWNSMLACYAQCGKPNEALAL 376
Query: 194 FRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTY 253
F +M A +P+E T++++L A G + +H Y I V L+D Y
Sbjct: 377 FDQMRAVG-VKPTEATVVSLLSACAHLGALDKGLHLHTYINDNRIEVNSI-VGTALVDMY 434
Query: 254 AKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVT 313
AKCG I A+++F ++E K++++W +II+G A+HG KEA + F M++ G++PN +T
Sbjct: 435 AKCGKISLATQVFN--AMESKDVLAWNTIIAGMAIHGNVKEAQQLFKEMKEAGVEPNDIT 492
Query: 314 FLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGI 373
F+++L+ACSH G+V+EG D M + P ++HYGC+ID+L RAG LE+A + +
Sbjct: 493 FVAILSACSHAGMVDEGQKLLDCMSSSYGIEPKVEHYGCVIDLLARAGFLEEAMELIGTM 552
Query: 374 PSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDA 433
P E + LLG C HGN E+GE V ++++ ++ + G Y+L+ NI A ++ DA
Sbjct: 553 PMEPNPSAL-GALLGGCRIHGNFELGEMVGKRLINLQPCHSGRYILLSNIYAAAKKWDDA 611
Query: 434 ERLRRVMDERNAFKVPGCSLV 454
++R +M KVPG S++
Sbjct: 612 RKVRNLMKVNGISKVPGVSVI 632
>gi|110741623|dbj|BAE98759.1| hypothetical protein [Arabidopsis thaliana]
Length = 504
Score = 278 bits (711), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 161/439 (36%), Positives = 247/439 (56%), Gaps = 18/439 (4%)
Query: 20 HLLTTNSLLHHSQ-----LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDS 74
+L+ L H Q L+N L+ Y + P ++ +LY L S L P +
Sbjct: 24 NLVYARKLFDHHQNSCTFLYNKLIQAYYVHHQPHESIVLYNLL------SFDGLRPSHHT 77
Query: 75 FTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDE 134
F + F + + P LH+ + GF+S + T L+ Y LG L + ++FDE
Sbjct: 78 FNFIFAASASFSSARPL--RLLHSQFFRSGFESDSFCCTTLITAYAKLGALCCARRVFDE 135
Query: 135 MPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALF 194
M +R++ WN MITG + G+++ A LF+ MP +NV SWT +I G+++ +EAL +F
Sbjct: 136 MSKRDVPVWNAMITGYQRRGDMKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMF 195
Query: 195 RKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFD-IRVLNCLIDTY 253
M + +P+ IT+++VLPA G+++ + + GY + GF FD I V N I+ Y
Sbjct: 196 LCMEKDKSVKPNHITVVSVLPACANLGELEIGRRLEGYARENGF--FDNIYVCNATIEMY 253
Query: 254 AKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVT 313
+KCG I A +LFE++ +R NL SW S+I A HG EA+ F +M + G KP+ VT
Sbjct: 254 SKCGMIDVAKRLFEELGNQR-NLCSWNSMIGSLATHGKHDEALTLFAQMLREGEKPDAVT 312
Query: 314 FLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGI 373
F+ +L AC HGG+V +G F M E ++ P ++HYGC+ID+LGR G+L++A +
Sbjct: 313 FVGLLLACVHGGMVVKGQELFKSMEEVHKISPKLEHYGCMIDLLGRVGKLQEAYDLIKTM 372
Query: 374 PSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDA 433
P + D VVW TLLGACSFHGNVE+ E + + ++E G+ V+M NI A ++
Sbjct: 373 PMK-PDAVVWGTLLGACSFHGNVEIAEIASEALFKLEPTNPGNCVIMSNIYAANEKWDGV 431
Query: 434 ERLRRVMDERNAFKVPGCS 452
R+R++M + K G S
Sbjct: 432 LRMRKLMKKETMTKAAGYS 450
>gi|225423995|ref|XP_002279343.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 623
Score = 278 bits (711), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 155/484 (32%), Positives = 254/484 (52%), Gaps = 74/484 (15%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNL 92
L+N++ Y+ +ES ++ L+ Q++ + + FT+ ++++C ++
Sbjct: 103 LWNSMFRGYAQSESYREVVFLFFQMKGMDIRP--------NCFTFPVVLKSCGKINALIE 154
Query: 93 GTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEM----------------- 135
G Q+H + K GF+ + +V T L++MY + G + D+ K+F EM
Sbjct: 155 GEQVHCFLIKCGFRGNPFVGTTLIDMYSAGGTVGDAYKIFCEMFERNVVAWTSMINGYIL 214
Query: 136 --------------PERNLVTWNVMITGLVKWGELEFARSLF------------------ 163
PER++V WN+M++G ++ G++ AR LF
Sbjct: 215 SADLVSARRLFDLAPERDVVLWNIMVSGYIEGGDMVEARKLFHEMPNRDVMFWNTVLKGY 274
Query: 164 -------------EEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITI 210
EEMP RN+ SW +I GY E L F++M++ P++ T+
Sbjct: 275 ATNGNVEALEGLFEEMPERNIFSWNALIGGYAHNGLFFEVLGSFKRMLSESDVPPNDATL 334
Query: 211 LAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDIS 270
+ VL A + G + + +H Y E G ++ V N L+D YAKCG I +A +F
Sbjct: 335 VTVLSACARLGALDLGKWVHVYAESSGLKG-NVYVGNALMDMYAKCGIIENAISVFR--G 391
Query: 271 VERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEG 330
++ K+L+SW ++I G AMH G +A+ F +M+ G KP+ +TF+ +L AC+H GLVE+G
Sbjct: 392 MDTKDLISWNTLIGGLAMHSRGADALNLFFQMKNAGQKPDGITFIGILCACTHMGLVEDG 451
Query: 331 LNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGAC 390
+F M ++ ++P I+HYGC++DML RAGRLEQA +P E D V+W LLGAC
Sbjct: 452 FAYFQSMADDYLIMPQIEHYGCMVDMLARAGRLEQAMAFVRKMPVE-ADGVIWAGLLGAC 510
Query: 391 SFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPG 450
+ NVE+ E ++++E+E +YV++ NI GR+ D RL+ M + K+PG
Sbjct: 511 RIYKNVELAELALQRLIELEPKNPANYVMLSNIYGDAGRWEDVARLKVAMRDTGFKKLPG 570
Query: 451 CSLV 454
CSL+
Sbjct: 571 CSLI 574
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 87/396 (21%), Positives = 162/396 (40%), Gaps = 82/396 (20%)
Query: 66 SPLPP--LFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLG 123
+P PP L + S L+++C T + Q+ A I GFQ + Y+ LV + +L
Sbjct: 29 APKPPHRLLEERFIS-LLQSCKTSKQVH---QIQAQIIANGFQYNEYITPKLVTICATLK 84
Query: 124 FLKDSSKLFDEMPERNLVTWNVMITGLVK---WGELEFARSLFEEMPCR----------- 169
+ + +LFD++P+ N+ WN M G + + E+ F + M R
Sbjct: 85 RMTYARQLFDQIPDPNIALWNSMFRGYAQSESYREVVFLFFQMKGMDIRPNCFTFPVVLK 144
Query: 170 -------------------------NVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTE 204
N T +ID Y+ +A +F CE E
Sbjct: 145 SCGKINALIEGEQVHCFLIKCGFRGNPFVGTTLIDMYSAGGTVGDAYKIF-----CEMFE 199
Query: 205 PSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRV------------------- 245
+ + +++ + D+ S + + +R ++I V
Sbjct: 200 RNVVAWTSMINGYILSADLVSARRLFDLAPERDVVLWNIMVSGYIEGGDMVEARKLFHEM 259
Query: 246 -------LNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVEN 298
N ++ YA G + + LFE++ +N+ SW ++I G+A +G+ E + +
Sbjct: 260 PNRDVMFWNTVLKGYATNGNVEALEGLFEEMP--ERNIFSWNALIGGYAHNGLFFEVLGS 317
Query: 299 FGRM-QKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDML 357
F RM + + PN T ++VL+AC+ G ++ G + E + ++ L+DM
Sbjct: 318 FKRMLSESDVPPNDATLVTVLSACARLGALDLG-KWVHVYAESSGLKGNVYVGNALMDMY 376
Query: 358 GRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFH 393
+ G +E A G+ ++ D++ W TL+G + H
Sbjct: 377 AKCGIIENAISVFRGMDTK--DLISWNTLIGGLAMH 410
>gi|449445033|ref|XP_004140278.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Cucumis sativus]
Length = 679
Score = 278 bits (710), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 138/383 (36%), Positives = 228/383 (59%), Gaps = 3/383 (0%)
Query: 73 DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLF 132
D FT+ F++++ L +G +H +I ++G Q +YV T+L+ +Y G + D+ K+F
Sbjct: 170 DYFTFPFVLKSSVELLSVWMGKCVHGLILRIGLQFDLYVATSLIILYGKCGEINDAGKVF 229
Query: 133 DEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALA 192
D M R++ +WN ++ G K G ++ A ++FE MP RN+VSWT +I GY++ + +AL+
Sbjct: 230 DNMTIRDVSSWNALLAGYTKSGCIDAALAIFERMPWRNIVSWTTMISGYSQSGLAQQALS 289
Query: 193 LFRKMVACEY-TEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLID 251
LF +MV + P+ +TI++VLPA Q ++ + IH + G + + VL L
Sbjct: 290 LFDEMVKEDSGVRPNWVTIMSVLPACAQLSTLERGRQIHELACRMGLNS-NASVLIALTA 348
Query: 252 TYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNR 311
YAKCG + A F+ ++ KNL++W ++I+ +A +G G +AV F M + G++P+
Sbjct: 349 MYAKCGSLVDARNCFDKLNRNEKNLIAWNTMITAYASYGHGLQAVSTFREMIQAGIQPDD 408
Query: 312 VTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTAL 371
+TF +L+ CSH GLV+ GL +F+ M + P ++HY C+ D+LGRAGRL +A K
Sbjct: 409 ITFTGLLSGCSHSGLVDVGLKYFNHMSTTYSINPRVEHYACVADLLGRAGRLAEASKLVG 468
Query: 372 GIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFG 431
+P +W +LL AC H N+EM E RK+ +E G+YVL+ N+ A GR+
Sbjct: 469 EMPMP-AGPSIWGSLLAACRKHRNLEMAETAARKLFVLEPENTGNYVLLSNMYAEAGRWQ 527
Query: 432 DAERLRRVMDERNAFKVPGCSLV 454
+ ++LR ++ + K PGCS +
Sbjct: 528 EVDKLRAIVKSQGTKKSPGCSWI 550
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 100/391 (25%), Positives = 167/391 (42%), Gaps = 39/391 (9%)
Query: 57 LQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALV 116
LQ + +P PP S+ F T L+ LG Q+HA + G Q V + +V
Sbjct: 55 LQNLLQPLSAPGPPPILSYAPVFQFLT--GLNMLKLGHQVHAHMLLRGLQPTALVGSKMV 112
Query: 117 NMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTG 176
Y S G + S +F+ + E + + +N MI ++G E + + M SW
Sbjct: 113 AFYASSGDIDSSVSVFNGIGEPSSLLFNSMIRAYARYGFAERTVATYFSMH-----SWGF 167
Query: 177 IIDGYT---RMNRSNEALALFRKMVACEYTEPSEI---------TILAVLPAIWQNGDVK 224
D +T + S E L+++ M C + I T L +L
Sbjct: 168 TGDYFTFPFVLKSSVELLSVW--MGKCVHGLILRIGLQFDLYVATSLIIL--------YG 217
Query: 225 SCQLIHGYGEK-RGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSII 283
C I+ G+ T D+ N L+ Y K GCI +A +FE + +N+VSWT++I
Sbjct: 218 KCGEINDAGKVFDNMTIRDVSSWNALLAGYTKSGCIDAALAIFERM--PWRNIVSWTTMI 275
Query: 284 SGFAMHGMGKEAVENFGRMQK--VGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEEC 341
SG++ G+ ++A+ F M K G++PN VT +SVL AC+ +E G + +
Sbjct: 276 SGYSQSGLAQQALSLFDEMVKEDSGVRPNWVTIMSVLPACAQLSTLERGRQIHE-LACRM 334
Query: 342 EVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGER 401
+ + L M + G L A + +++ W T++ A + +G+ G +
Sbjct: 335 GLNSNASVLIALTAMYAKCGSLVDARNCFDKLNRNEKNLIAWNTMITAYASYGH---GLQ 391
Query: 402 VTRKILEM-ERGYGGDYVLMYNILAGVGRFG 431
EM + G D + +L+G G
Sbjct: 392 AVSTFREMIQAGIQPDDITFTGLLSGCSHSG 422
>gi|356561772|ref|XP_003549152.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g33350-like [Glycine max]
Length = 522
Score = 278 bits (710), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 154/428 (35%), Positives = 245/428 (57%), Gaps = 17/428 (3%)
Query: 30 HSQLFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSH 89
++ LF ++ Y+ + + L ++ H PP + F + ++TC
Sbjct: 69 NTHLFTAMITAYAAHPATHPSAL------SLFRHMLRSQPPRPNHFIFPHALKTCPESC- 121
Query: 90 PNLGTQLHAVISKVGFQSHVYVNTALVNMYVSL-GFLKDSSKLFDEMPERNLVTWNVMIT 148
LHA I K GF + V TALV+ Y + G L ++ K+FDEM +R++V++ M++
Sbjct: 122 --AAESLHAQIVKSGFHEYPVVQTALVDSYSKVSGGLGNAKKVFDEMSDRSVVSFTAMVS 179
Query: 149 GLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEI 208
G + G++E A +F EM R+V SW +I G T+ + + LFR+MV E P+ +
Sbjct: 180 GFARVGDVESAVRVFGEMLDRDVPSWNALIAGCTQNGAFTQGIELFRRMVF-ECNRPNGV 238
Query: 209 TILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFED 268
T++ L A G ++ + IHGY K G AFD VLN L+D Y KCG + A K+FE
Sbjct: 239 TVVCALSACGHMGMLQLGRWIHGYVYKNGL-AFDSFVLNALVDMYGKCGSLGKARKVFE- 296
Query: 269 ISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVG--LKPNRVTFLSVLNACSHGGL 326
K L SW S+I+ FA+HG A+ F +M + G ++P+ VTF+ +LNAC+HGGL
Sbjct: 297 -MNPEKGLTSWNSMINCFALHGQSDSAIAIFEQMVEGGGGVRPDEVTFVGLLNACTHGGL 355
Query: 327 VEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTL 386
VE+G +F+ MV+E + P I+HYGCLID+LGRAGR ++A G+ E D VVW +L
Sbjct: 356 VEKGYWYFEMMVQEYGIEPQIEHYGCLIDLLGRAGRFDEAMDVVKGMSME-PDEVVWGSL 414
Query: 387 LGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAF 446
L C HG ++ E +K++E++ GG +++ N+ +G++ + + R + ++ ++
Sbjct: 415 LNGCKVHGRTDLAEFAAKKLIEIDPHNGGYRIMLANVYGELGKWDEVRNVWRTLKQQKSY 474
Query: 447 KVPGCSLV 454
KVPGCS +
Sbjct: 475 KVPGCSWI 482
>gi|449481169|ref|XP_004156102.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Cucumis sativus]
Length = 642
Score = 278 bits (710), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 138/383 (36%), Positives = 228/383 (59%), Gaps = 3/383 (0%)
Query: 73 DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLF 132
D FT+ F++++ L +G +H +I ++G Q +YV T+L+ +Y G + D+ K+F
Sbjct: 133 DYFTFPFVLKSSVELLSVWMGKCVHGLILRIGLQFDLYVATSLIILYGKCGEINDAGKVF 192
Query: 133 DEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALA 192
D M R++ +WN ++ G K G ++ A ++FE MP RN+VSWT +I GY++ + +AL+
Sbjct: 193 DNMTIRDVSSWNALLAGYTKSGCIDAALAIFERMPWRNIVSWTTMISGYSQSGLAQQALS 252
Query: 193 LFRKMVACEY-TEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLID 251
LF +MV + P+ +TI++VLPA Q ++ + IH + G + + VL L
Sbjct: 253 LFDEMVKEDSGVRPNWVTIMSVLPACAQLSTLERGRQIHELACRMGLNS-NASVLIALTA 311
Query: 252 TYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNR 311
YAKCG + A F+ ++ KNL++W ++I+ +A +G G +AV F M + G++P+
Sbjct: 312 MYAKCGSLVDARNCFDKLNRNEKNLIAWNTMITAYASYGHGLQAVSTFREMIQAGIQPDD 371
Query: 312 VTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTAL 371
+TF +L+ CSH GLV+ GL +F+ M + P ++HY C+ D+LGRAGRL +A K
Sbjct: 372 ITFTGLLSGCSHSGLVDVGLKYFNHMSTTYSINPRVEHYACVADLLGRAGRLAEASKLVG 431
Query: 372 GIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFG 431
+P +W +LL AC H N+EM E RK+ +E G+YVL+ N+ A GR+
Sbjct: 432 EMPMP-AGPSIWGSLLAACRKHRNLEMAETAARKLFVLEPENTGNYVLLSNMYAEAGRWQ 490
Query: 432 DAERLRRVMDERNAFKVPGCSLV 454
+ ++LR ++ + K PGCS +
Sbjct: 491 EVDKLRAIVKSQGTKKSPGCSWI 513
>gi|224065565|ref|XP_002301860.1| predicted protein [Populus trichocarpa]
gi|222843586|gb|EEE81133.1| predicted protein [Populus trichocarpa]
Length = 933
Score = 278 bits (710), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 154/453 (33%), Positives = 248/453 (54%), Gaps = 43/453 (9%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNL 92
++N ++ + + P +A LY Q+ + SP S+T+ LI+ C +S
Sbjct: 47 VYNAMIKGFVQSYQPVQALELYVQMLRANV---SP-----TSYTFPSLIKACGLVSQLRF 98
Query: 93 GTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVK 152
+H + + GF SHV+V T+LV+ Y S+G +++S ++FDEMPER++ W M++GLV+
Sbjct: 99 AEAVHGHVWRNGFDSHVFVQTSLVDFYSSMGRIEESVRVFDEMPERDVFAWTTMVSGLVR 158
Query: 153 WGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACE----------Y 202
G++ A LF+ MP RN+ +W +IDGY R+ + A LF +M A + Y
Sbjct: 159 VGDMSSAGRLFDMMPDRNLATWNTLIDGYARLREVDVAELLFNQMPARDIISWTTMINCY 218
Query: 203 TE--------------------PSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFD 242
++ P E+T+ V+ A G + + IH Y + GF D
Sbjct: 219 SQNKRFREALGVFNEMAKHGISPDEVTMATVISACAHLGALDLGKEIHYYIMQHGFN-LD 277
Query: 243 IRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRM 302
+ + + LID YAKCG + + +F + KNL W S+I G A+HG +EA+ F +M
Sbjct: 278 VYIGSALIDMYAKCGSLDRSLLMF--FKLREKNLFCWNSVIEGLAVHGYAEEALAMFDKM 335
Query: 303 QKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGR 362
++ +KPN VTF+SVL+AC+H GL+EEG F M + + P ++HYGC++D+L +AG
Sbjct: 336 EREKIKPNGVTFVSVLSACNHAGLIEEGRKRFASMTRDHSIPPGVEHYGCMVDLLSKAGL 395
Query: 363 LEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYN 422
LE+A + + E + V+W LL C H N+E+ + K++ +E G G Y L+ N
Sbjct: 396 LEEALQLIRTMKLE-PNAVIWGALLSGCKLHRNLEIAQVAANKLMVLEPGNSGYYTLLVN 454
Query: 423 ILAGVGRFGDAERLRRVMDERNAFK-VPGCSLV 454
+ A V R+G+A ++R M E+ K PG S +
Sbjct: 455 MNAEVNRWGEAAKIRLTMKEQGVEKRCPGSSWI 487
>gi|87241257|gb|ABD33115.1| SAM (and some other nucleotide) binding motif; Methyltransferase
small; Tetratricopeptide-like helical [Medicago
truncatula]
Length = 971
Score = 278 bits (710), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 141/375 (37%), Positives = 225/375 (60%), Gaps = 5/375 (1%)
Query: 80 LIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERN 139
+I +C+ + NLG + H I + G + + + AL++MYV G L + LFD M ++
Sbjct: 265 MISSCSQVQDLNLGKEFHCYIKEHGLEFTIPLTNALMDMYVKCGELLTARVLFDNMAQKT 324
Query: 140 LVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVA 199
LV+W M+ G ++G L+ AR + ++P ++VV W II G + + EALALF +M
Sbjct: 325 LVSWTTMVLGYARFGFLDVAREILYKIPEKSVVPWNAIISGCVQAKQGKEALALFHEM-Q 383
Query: 200 CEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCI 259
EP ++T++ L A Q G + IH Y E+ + D+ + L+D YAKCG I
Sbjct: 384 IRTIEPDKVTMVNCLSACSQLGALDVGIWIHHYIERHKLS-IDVALGTALVDMYAKCGNI 442
Query: 260 FSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLN 319
A ++FE+I ++N ++WT++I G A+HG ++A+ F +M +G+ P+ +TFL VL+
Sbjct: 443 ARALQVFEEIP--QRNCLTWTAVICGLALHGNAQDALSYFSKMIHIGIVPDEITFLGVLS 500
Query: 320 ACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITD 379
AC HGGLVEEG +F +M + V P +KHY C++D+LGRAG LE+AE+ +P D
Sbjct: 501 ACCHGGLVEEGRKYFSEMSSKFNVSPKLKHYSCMVDLLGRAGHLEEAEELVKNMPMA-AD 559
Query: 380 VVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRV 439
V L AC +GNV++GER K+LE++ G+YVL+ ++ + + +A R++
Sbjct: 560 AAVLGALFFACRVYGNVQIGERTAFKLLEIDPQDSGNYVLLASMYSEAKMWKEARSARKL 619
Query: 440 MDERNAFKVPGCSLV 454
M+++ K PGCSLV
Sbjct: 620 MNDKGVEKTPGCSLV 634
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 111/443 (25%), Positives = 199/443 (44%), Gaps = 78/443 (17%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+N + Y + + F+LYK++ T L P D+ TY L++ C LG
Sbjct: 125 WNAAIRGYVESGDIEGGFMLYKRMLLGGT-----LKP--DNHTYPLLLKGCCGQYSSCLG 177
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
+ + K GF+ ++V+ A + M +S G L + +F++ R+LVTWN MITG VK
Sbjct: 178 LGVLGHVLKFGFECDIFVHNASITMLLSCGELSVAYDVFNKSRVRDLVTWNSMITGCVKR 237
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
G + EA+ ++++M A E P+EIT++ +
Sbjct: 238 G-------------------------------LAIEAIKIYKEMEA-EKVRPNEITMIGM 265
Query: 214 LPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVER 273
+ + Q D+ + H Y ++ G F I + N L+D Y KCG + +A LF++++ +
Sbjct: 266 ISSCSQVQDLNLGKEFHCYIKEHGLE-FTIPLTNALMDMYVKCGELLTARVLFDNMA--Q 322
Query: 274 KNLVSWTSIISGFAMHGM-------------------------------GKEAVENFGRM 302
K LVSWT+++ G+A G GKEA+ F M
Sbjct: 323 KTLVSWTTMVLGYARFGFLDVAREILYKIPEKSVVPWNAIISGCVQAKQGKEALALFHEM 382
Query: 303 QKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGR 362
Q ++P++VT ++ L+ACS G ++ G+ + +E ++ D+ L+DM + G
Sbjct: 383 QIRTIEPDKVTMVNCLSACSQLGALDVGI-WIHHYIERHKLSIDVALGTALVDMYAKCGN 441
Query: 363 LEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYN 422
+ +A + IP + + W ++ + HGN + K++ + G D +
Sbjct: 442 IARALQVFEEIPQR--NCLTWTAVICGLALHGNAQDALSYFSKMIHI--GIVPDEITFLG 497
Query: 423 ILAGVGRFGDAERLRRVMDERNA 445
+L+ G E R+ E ++
Sbjct: 498 VLSACCHGGLVEEGRKYFSEMSS 520
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 77/325 (23%), Positives = 126/325 (38%), Gaps = 53/325 (16%)
Query: 145 VMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTE 204
V L + EL++ + + NV SW I GY L+++M+ +
Sbjct: 96 VAFCALSESKELDYCTRILYRIKELNVFSWNAAIRGYVESGDIEGGFMLYKRMLLGGTLK 155
Query: 205 PSEITILAVLPAIWQNGDVKSC--QLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSA 262
P T +L G SC + G+ K GF DI V N I CG + A
Sbjct: 156 PDNHTYPLLLKGCC--GQYSSCLGLGVLGHVLKFGFEC-DIFVHNASITMLLSCGELSVA 212
Query: 263 SKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACS 322
+F V ++LV+W S+I+G G+ EA++ + M+ ++PN +T + ++++CS
Sbjct: 213 YDVFNKSRV--RDLVTWNSMITGCVKRGLAIEAIKIYKEMEAEKVRPNEITMIGMISSCS 270
Query: 323 -----------HGGLVEEGLNF------------------------FDKMVEECEVLPDI 347
H + E GL F FD M ++ V
Sbjct: 271 QVQDLNLGKEFHCYIKEHGLEFTIPLTNALMDMYVKCGELLTARVLFDNMAQKTLV---- 326
Query: 348 KHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKIL 407
+ ++ R G L+ A + IP + VV W ++ C + G+
Sbjct: 327 -SWTTMVLGYARFGFLDVAREILYKIPEK--SVVPWNAIISGCV---QAKQGKEALALFH 380
Query: 408 EME-RGYGGDYVLMYNILAGVGRFG 431
EM+ R D V M N L+ + G
Sbjct: 381 EMQIRTIEPDKVTMVNCLSACSQLG 405
>gi|297806919|ref|XP_002871343.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317180|gb|EFH47602.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 511
Score = 278 bits (710), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 166/462 (35%), Positives = 257/462 (55%), Gaps = 27/462 (5%)
Query: 12 NITTQIHSHLL-----TTNSLLHHSQLFNTLLH---FYSLAESPQKAFLLYKQLQQIYTH 63
N Q+H+H L T LL L L++ + L +P LY +L Q Y+
Sbjct: 2 NQIKQLHAHCLRTGVDETKDLLQRLLLIPNLVYARKLFDLHRNP--CIFLYNKLIQSYSV 59
Query: 64 SHSPLPPL-------FDSF-----TYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYV 111
H P + FD T++F+ A+ S LH+ + GF+S +
Sbjct: 60 HHQPHESIVLYNLLSFDGIRPNHHTFNFIFAASASFSSARPLRLLHSQFFRSGFESDSFC 119
Query: 112 NTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNV 171
TAL+ Y LG L + ++FDEM R++ WN MITG + G+++ A LF+ MP +NV
Sbjct: 120 CTALITAYAKLGALCCARRVFDEMSNRDVPVWNAMITGYQRRGDMKAAMELFDSMPNKNV 179
Query: 172 VSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHG 231
SWT +I G+++ +EAL +F M + +P+ IT+++VLPA G+++ + + G
Sbjct: 180 TSWTTVISGFSQNGNYSEALTMFLCMEKDKSVKPNHITLVSVLPACANLGELEIGRRLEG 239
Query: 232 YGEKRGFTAFD-IRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHG 290
Y + GF FD I V N ++ Y+KCG I A +LF++I +R NL+SW S+I A HG
Sbjct: 240 YARENGF--FDNIYVRNATLEMYSKCGMIDVAKRLFDEIGNQR-NLISWNSMIGSLATHG 296
Query: 291 MGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHY 350
EA+E + +M + G +P+ VTF+ +L AC HGG+V +G M E ++ P ++HY
Sbjct: 297 KHDEALELYAQMLQEGERPDAVTFVGLLLACVHGGMVLKGKELLKSMEEVHKISPKLEHY 356
Query: 351 GCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEME 410
GC+ID+LGR G+L++A +P + D VVW TLLGACSFHGNVE+ E + ++++E
Sbjct: 357 GCMIDLLGRVGKLQEACDLIKTMPMK-PDAVVWGTLLGACSFHGNVEIAEIASEALMKLE 415
Query: 411 RGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCS 452
G+ V+M NI A ++ R+R++M + K G S
Sbjct: 416 PTNPGNCVIMSNIYAANEKWDGVLRMRKLMKKETMTKAAGYS 457
>gi|147775281|emb|CAN61593.1| hypothetical protein VITISV_030555 [Vitis vinifera]
Length = 673
Score = 278 bits (710), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 163/455 (35%), Positives = 246/455 (54%), Gaps = 49/455 (10%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNL 92
L+N ++ P KA LLY ++ + HS + +TY +++ C+
Sbjct: 105 LWNCMIKVCIENNEPFKAILLYYEM--VVAHSRP------NKYTYPAVLKACSDSGVVAE 156
Query: 93 GTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDE------------------ 134
G Q+HA + K G ++ ++ + MY S G L ++ ++ D+
Sbjct: 157 GVQVHAHLVKHGLGGDGHILSSAIRMYASFGRLVEARRILDDKGGEVDAVCWNAMIDGYL 216
Query: 135 --------------MPERNLV-TWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIID 179
MP+R+++ TWN MI+G + G +E AR F+EM R+ +SW+ +ID
Sbjct: 217 RFGEVEAARELFEGMPDRSMISTWNAMISGFSRCGMVEVAREFFDEMKERDEISWSAMID 276
Query: 180 GYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFT 239
GY + EAL +F +M E P + + +VL A G + + IH Y KR
Sbjct: 277 GYIQEGCFMEALEIFHQMQK-EKIRPRKFVLPSVLSACANLGALDQGRWIHTYA-KRNSI 334
Query: 240 AFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENF 299
D + L+D YAKCG I A ++FE +S K + SW ++I G AMHG ++A++ F
Sbjct: 335 QLDGVLGTSLVDMYAKCGRIDLAWEVFEKMS--NKEVSSWNAMIGGLAMHGRAEDAIDLF 392
Query: 300 GRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGR 359
+M + PN +TF+ VLNAC+HGGLV++GL F+ M +E V P I+HYGC++D+LGR
Sbjct: 393 SKMD---IYPNEITFVGVLNACAHGGLVQKGLTIFNSMRKEYGVEPQIEHYGCIVDLLGR 449
Query: 360 AGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVL 419
AG L +AEK IP+E T VW LLGAC HGNVE+GERV + +LE+E G Y L
Sbjct: 450 AGLLTEAEKVVSSIPTEPTP-AVWGALLGACRKHGNVELGERVGKILLELEPQNSGRYTL 508
Query: 420 MYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
+ NI A GR+ + +R++M ER PG S++
Sbjct: 509 LSNIYAKAGRWEEVGEVRKLMKERGIKTTPGTSII 543
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 87/385 (22%), Positives = 170/385 (44%), Gaps = 59/385 (15%)
Query: 61 YTHSHSPLPPLFDSFTYSF-------LIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNT 113
Y H H +P + T L+ T T S +L Q HA+I + G Y+
Sbjct: 13 YHHHHHLIPKGHSTETSKLSHKAILHLLNTQCTTSLHHL-KQAHALILRTGHLQDSYIAG 71
Query: 114 ALVNMYVSLGF-----LKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEM-- 166
+LV Y ++ + S ++FD + + N+ WN MI ++ E A L+ EM
Sbjct: 72 SLVKSYANVSTNRYLSFESSLRVFDFVRKPNVFLWNCMIKVCIENNEPFKAILLYYEMVV 131
Query: 167 ----PCR-------NVVSWTGII-----------------DGY-----TRMNRSNEALAL 193
P + S +G++ DG+ RM S L
Sbjct: 132 AHSRPNKYTYPAVLKACSDSGVVAEGVQVHAHLVKHGLGGDGHILSSAIRMYASFGRLVE 191
Query: 194 FRKMVACEYTEPSEITILAVLPAIWQNGDVKSC-QLIHGYGEKRGFTAFDIRVLNCLIDT 252
R+++ + E + A++ + G+V++ +L G ++ + + N +I
Sbjct: 192 ARRILDDKGGEVDAVCWNAMIDGYLRFGEVEAARELFEGMPDRSMISTW-----NAMISG 246
Query: 253 YAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRV 312
+++CG + A + F+++ + ++ +SW+++I G+ G EA+E F +MQK ++P +
Sbjct: 247 FSRCGMVEVAREFFDEM--KERDEISWSAMIDGYIQEGCFMEALEIFHQMQKEKIRPRKF 304
Query: 313 TFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALG 372
SVL+AC++ G +++G + + + D L+DM + GR++ A +
Sbjct: 305 VLPSVLSACANLGALDQG-RWIHTYAKRNSIQLDGVLGTSLVDMYAKCGRIDLAWEVFEK 363
Query: 373 IPSEITDVVVWRTLLGACSFHGNVE 397
+ ++ +V W ++G + HG E
Sbjct: 364 MSNK--EVSSWNAMIGGLAMHGRAE 386
Score = 39.7 bits (91), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 70/173 (40%), Gaps = 9/173 (5%)
Query: 271 VERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEG 330
V + N+ W +I + +A+ + M +PN+ T+ +VL ACS G+V EG
Sbjct: 98 VRKPNVFLWNCMIKVCIENNEPFKAILLYYEMVVAHSRPNKYTYPAVLKACSDSGVVAEG 157
Query: 331 LNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGAC 390
+ +V+ + D I M GRL +A + E+ D V W ++
Sbjct: 158 VQVHAHLVKHG-LGGDGHILSSAIRMYASFGRLVEARRILDDKGGEV-DAVCWNAMIDGY 215
Query: 391 SFHGNVEMGERVTRKILEMERGYGGDYVLMYN-ILAGVGRFGDAERLRRVMDE 442
G VE + + + + +N +++G R G E R DE
Sbjct: 216 LRFGEVEAARELFEGMPDR------SMISTWNAMISGFSRCGMVEVAREFFDE 262
>gi|356565531|ref|XP_003550993.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Glycine max]
Length = 628
Score = 278 bits (710), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 164/453 (36%), Positives = 249/453 (54%), Gaps = 39/453 (8%)
Query: 8 QTPNNITTQIHSHLLTTNSLLHHSQLFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSP 67
+TPN + +H++ ++ H LF+ L +YS Q+ TH P
Sbjct: 80 RTPNP-NVFLWTHIINAHA---HFDLFHHALSYYS----------------QMLTH---P 116
Query: 68 LPPLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKD 127
+ P ++FT S L++ C HP HA+ K G SH+YV+T LV+ Y G +
Sbjct: 117 IQP--NAFTLSSLLKACTL--HPARAVHSHAI--KFGLSSHLYVSTGLVDAYARGGDVAS 170
Query: 128 SSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRS 187
+ KLFD MPER+LV++ M+T K G L AR LFE M ++VV W +IDGY +
Sbjct: 171 AQKLFDAMPERSLVSYTAMLTCYAKHGMLPEARVLFEGMGMKDVVCWNVMIDGYAQHGCP 230
Query: 188 NEALALFRKMVACEY------TEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAF 241
NEAL FRKM+ P+EIT++AVL + Q G ++ + +H Y E G
Sbjct: 231 NEALVFFRKMMMMMGGNGNGKVRPNEITVVAVLSSCGQVGALECGKWVHSYVENNGIKV- 289
Query: 242 DIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGR 301
++RV L+D Y KCG + A K+F+ +E K++V+W S+I G+ +HG EA++ F
Sbjct: 290 NVRVGTALVDMYCKCGSLEDARKVFD--VMEGKDVVAWNSMIMGYGIHGFSDEALQLFHE 347
Query: 302 MQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAG 361
M +G+KP+ +TF++VL AC+H GLV +G FD M + + P ++HYGC++++LGRAG
Sbjct: 348 MCCIGVKPSDITFVAVLTACAHAGLVSKGWEVFDSMKDGYGMEPKVEHYGCMVNLLGRAG 407
Query: 362 RLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMY 421
R+++A + E D V+W TLL AC H NV +GE + ++ G YVL+
Sbjct: 408 RMQEAYDLVRSMEVE-PDPVLWGTLLWACRIHSNVSLGEEIAEILVSNGLASSGTYVLLS 466
Query: 422 NILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
N+ A + ++R +M K PGCS +
Sbjct: 467 NMYAAARNWVGVAKVRSMMKGSGVEKEPGCSSI 499
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 99/397 (24%), Positives = 159/397 (40%), Gaps = 67/397 (16%)
Query: 95 QLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWG 154
Q+HA + + G H +N L Y SLG L S LF P N+ W +I +
Sbjct: 41 QIHAALLRRGLHHHPILNFKLQRSYASLGHLHHSVTLFHRTPNPNVFLWTHIINAHAHFD 100
Query: 155 ELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITI-LAV 213
A S + +M + + + + A A+ A ++ S + + +
Sbjct: 101 LFHHALSYYSQMLTHPIQPNAFTLSSLLKACTLHPARAVHSH--AIKFGLSSHLYVSTGL 158
Query: 214 LPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVER 273
+ A + GDV S Q + +R ++ ++ YAK G + A LFE + +
Sbjct: 159 VDAYARGGDVASAQKLFDAMPERSLVSY-----TAMLTCYAKHGMLPEARVLFEGMGM-- 211
Query: 274 KNLVSWTSIISGFAMHGMGKEAVENFGR-------MQKVGLKPNRVTFLSVLNACSHGGL 326
K++V W +I G+A HG EA+ F + ++PN +T ++VL++C G
Sbjct: 212 KDVVCWNVMIDGYAQHGCPNEALVFFRKMMMMMGGNGNGKVRPNEITVVAVLSSCGQVGA 271
Query: 327 VEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKT----------------- 369
+E G + VE + +++ L+DM + G LE A K
Sbjct: 272 LECG-KWVHSYVENNGIKVNVRVGTALVDMYCKCGSLEDARKVFDVMEGKDVVAWNSMIM 330
Query: 370 -------------------ALGI-PSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEM 409
+G+ PS+IT V V L AC+ G V G V M
Sbjct: 331 GYGIHGFSDEALQLFHEMCCIGVKPSDITFVAV----LTACAHAGLVSKGWEV---FDSM 383
Query: 410 ERGYGGD-----YVLMYNILAGVGRFGDAERLRRVMD 441
+ GYG + Y M N+L GR +A L R M+
Sbjct: 384 KDGYGMEPKVEHYGCMVNLLGRAGRMQEAYDLVRSME 420
>gi|413947864|gb|AFW80513.1| hypothetical protein ZEAMMB73_142876 [Zea mays]
Length = 582
Score = 278 bits (710), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 159/443 (35%), Positives = 241/443 (54%), Gaps = 14/443 (3%)
Query: 15 TQIHSHLLTTNSLLHHSQLFNTLLHFYSLAESPQKAFLLYKQLQQ--IYTHSHSPLPPLF 72
+I + LLT+ L +L + L+ S + P A LY L + + H+ LP L
Sbjct: 21 VRIQAALLTSGQLPRSVELHDALIRALSRSARPHLALPLYAHLLRAGLLPTPHT-LPSLL 79
Query: 73 DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVS-LGFLKDSSKL 131
S S + A L+ L HAV K+G V V+ AL+ ++ LG L D L
Sbjct: 80 KSMALSPAVPGAAVLA---LTVHTHAV--KLGLDRFVLVSNALIRVHAGFLGSLADGLLL 134
Query: 132 FDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEAL 191
+ T+N +IT + G L AR+LF+EMP RN VSW+ +++GY + EAL
Sbjct: 135 LRTAAAVDASTFNTLITAYARAGRLADARALFDEMPARNAVSWSAMVNGYVQAGDGREAL 194
Query: 192 ALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLID 251
+F +M A E P + ++ VL A Q+G ++ + +HGY + G ++ L+D
Sbjct: 195 RIFARMQA-EDVRPDDTVLVGVLAACAQHGALEQGKWVHGYLKAHGIK-INLFFGTALVD 252
Query: 252 TYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNR 311
Y+KCG + A +FE ++ KN+++WT++I G AMHG G EAV F +M+ G++P+
Sbjct: 253 MYSKCGEVQLAMDVFE--RMQYKNVLAWTTMIKGLAMHGRGSEAVMLFAQMESSGIRPDD 310
Query: 312 VTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTAL 371
+ F+ VL AC+H GLV++G FD MV + + P I+HYGC++D+L R G L +A++
Sbjct: 311 IAFIGVLCACTHAGLVDKGRELFDSMVRKYGIKPKIEHYGCMVDLLARNGFLYEAKEMIQ 370
Query: 372 GIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFG 431
+P E D ++W L+ C FH NVE E V + + +E G YVL+ NI A GR
Sbjct: 371 KMPME-PDALIWGALMAGCRFHKNVEFAEYVAKHWILLEPDKSGAYVLLSNIYAASGRHA 429
Query: 432 DAERLRRVMDERNAFKVPGCSLV 454
A +R +M E+ K PGCS V
Sbjct: 430 SAREIRHLMREKGVDKTPGCSTV 452
>gi|357469751|ref|XP_003605160.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355506215|gb|AES87357.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1026
Score = 277 bits (709), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 141/375 (37%), Positives = 225/375 (60%), Gaps = 5/375 (1%)
Query: 80 LIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERN 139
+I +C+ + NLG + H I + G + + + AL++MYV G L + LFD M ++
Sbjct: 265 MISSCSQVQDLNLGKEFHCYIKEHGLEFTIPLTNALMDMYVKCGELLTARVLFDNMAQKT 324
Query: 140 LVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVA 199
LV+W M+ G ++G L+ AR + ++P ++VV W II G + + EALALF +M
Sbjct: 325 LVSWTTMVLGYARFGFLDVAREILYKIPEKSVVPWNAIISGCVQAKQGKEALALFHEM-Q 383
Query: 200 CEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCI 259
EP ++T++ L A Q G + IH Y E+ + D+ + L+D YAKCG I
Sbjct: 384 IRTIEPDKVTMVNCLSACSQLGALDVGIWIHHYIERHKLS-IDVALGTALVDMYAKCGNI 442
Query: 260 FSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLN 319
A ++FE+I ++N ++WT++I G A+HG ++A+ F +M +G+ P+ +TFL VL+
Sbjct: 443 ARALQVFEEIP--QRNCLTWTAVICGLALHGNAQDALSYFSKMIHIGIVPDEITFLGVLS 500
Query: 320 ACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITD 379
AC HGGLVEEG +F +M + V P +KHY C++D+LGRAG LE+AE+ +P D
Sbjct: 501 ACCHGGLVEEGRKYFSEMSSKFNVSPKLKHYSCMVDLLGRAGHLEEAEELVKNMPMA-AD 559
Query: 380 VVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRV 439
V L AC +GNV++GER K+LE++ G+YVL+ ++ + + +A R++
Sbjct: 560 AAVLGALFFACRVYGNVQIGERTAFKLLEIDPQDSGNYVLLASMYSEAKMWKEARSARKL 619
Query: 440 MDERNAFKVPGCSLV 454
M+++ K PGCSLV
Sbjct: 620 MNDKGVEKTPGCSLV 634
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 111/443 (25%), Positives = 199/443 (44%), Gaps = 78/443 (17%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+N + Y + + F+LYK++ T L P D+ TY L++ C LG
Sbjct: 125 WNAAIRGYVESGDIEGGFMLYKRMLLGGT-----LKP--DNHTYPLLLKGCCGQYSSCLG 177
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
+ + K GF+ ++V+ A + M +S G L + +F++ R+LVTWN MITG VK
Sbjct: 178 LGVLGHVLKFGFECDIFVHNASITMLLSCGELSVAYDVFNKSRVRDLVTWNSMITGCVKR 237
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
G + EA+ ++++M A E P+EIT++ +
Sbjct: 238 G-------------------------------LAIEAIKIYKEMEA-EKVRPNEITMIGM 265
Query: 214 LPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVER 273
+ + Q D+ + H Y ++ G F I + N L+D Y KCG + +A LF++++ +
Sbjct: 266 ISSCSQVQDLNLGKEFHCYIKEHGLE-FTIPLTNALMDMYVKCGELLTARVLFDNMA--Q 322
Query: 274 KNLVSWTSIISGFAMHGM-------------------------------GKEAVENFGRM 302
K LVSWT+++ G+A G GKEA+ F M
Sbjct: 323 KTLVSWTTMVLGYARFGFLDVAREILYKIPEKSVVPWNAIISGCVQAKQGKEALALFHEM 382
Query: 303 QKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGR 362
Q ++P++VT ++ L+ACS G ++ G+ + +E ++ D+ L+DM + G
Sbjct: 383 QIRTIEPDKVTMVNCLSACSQLGALDVGI-WIHHYIERHKLSIDVALGTALVDMYAKCGN 441
Query: 363 LEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYN 422
+ +A + IP + + W ++ + HGN + K++ + G D +
Sbjct: 442 IARALQVFEEIPQR--NCLTWTAVICGLALHGNAQDALSYFSKMIHI--GIVPDEITFLG 497
Query: 423 ILAGVGRFGDAERLRRVMDERNA 445
+L+ G E R+ E ++
Sbjct: 498 VLSACCHGGLVEEGRKYFSEMSS 520
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 77/325 (23%), Positives = 126/325 (38%), Gaps = 53/325 (16%)
Query: 145 VMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTE 204
V L + EL++ + + NV SW I GY L+++M+ +
Sbjct: 96 VAFCALSESKELDYCTRILYRIKELNVFSWNAAIRGYVESGDIEGGFMLYKRMLLGGTLK 155
Query: 205 PSEITILAVLPAIWQNGDVKSC--QLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSA 262
P T +L G SC + G+ K GF DI V N I CG + A
Sbjct: 156 PDNHTYPLLLKGCC--GQYSSCLGLGVLGHVLKFGFEC-DIFVHNASITMLLSCGELSVA 212
Query: 263 SKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACS 322
+F V ++LV+W S+I+G G+ EA++ + M+ ++PN +T + ++++CS
Sbjct: 213 YDVFNKSRV--RDLVTWNSMITGCVKRGLAIEAIKIYKEMEAEKVRPNEITMIGMISSCS 270
Query: 323 -----------HGGLVEEGLNF------------------------FDKMVEECEVLPDI 347
H + E GL F FD M ++ V
Sbjct: 271 QVQDLNLGKEFHCYIKEHGLEFTIPLTNALMDMYVKCGELLTARVLFDNMAQKTLV---- 326
Query: 348 KHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKIL 407
+ ++ R G L+ A + IP + VV W ++ C + G+
Sbjct: 327 -SWTTMVLGYARFGFLDVAREILYKIPEK--SVVPWNAIISGCV---QAKQGKEALALFH 380
Query: 408 EME-RGYGGDYVLMYNILAGVGRFG 431
EM+ R D V M N L+ + G
Sbjct: 381 EMQIRTIEPDKVTMVNCLSACSQLG 405
>gi|357133503|ref|XP_003568364.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g20540-like [Brachypodium distachyon]
Length = 554
Score = 277 bits (709), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 148/446 (33%), Positives = 254/446 (56%), Gaps = 20/446 (4%)
Query: 14 TTQIHSHLLTTNSLLHHSQLFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLF- 72
T++ S + N LH N ++ Y+ A +Y ++ + P P +
Sbjct: 64 ATRVFSQVREPNLHLH-----NAMIKAYAQNHRHLDAITVYIRMLR-----RRPFPWISC 113
Query: 73 ---DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSS 129
D FTY FL++ C L +LG Q+H + + G +S+ V +L+ MY G L +
Sbjct: 114 TGGDRFTYPFLLKACGGLMALDLGKQVHGHVVRSGCESNAIVQNSLIEMYTRAGDLVLAR 173
Query: 130 KLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNE 189
K+FD M ER++V+WN +I+ + G++ AR++F MP + VVSWT ++ GYT +
Sbjct: 174 KVFDGMQERDVVSWNTVISAHARLGQMRKARAVFNSMPDKTVVSWTALVSGYTAAGDFSG 233
Query: 190 ALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCL 249
A+ FR M E EP +++I+AVLPA Q G ++ + I+ Y + + V N L
Sbjct: 234 AVEAFRLM-QMEGFEPDDVSIVAVLPACAQLGALELGRWIYAYCNRHQMLR-ETYVCNAL 291
Query: 250 IDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVG-LK 308
++ YAKCGCI A +LF ++ K+++SW++++ G A HG +EAV+ F M++ G +K
Sbjct: 292 VEMYAKCGCIDQALQLFNGMA--EKDVISWSTMVGGLAAHGRAQEAVQLFTEMERQGTVK 349
Query: 309 PNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEK 368
PN +TF+ +L+ACSH GL++EGL++FD+M + + P ++HYGC++D+L R+G++++
Sbjct: 350 PNGITFVGLLSACSHAGLLDEGLDYFDRMNDVYGIEPGVEHYGCIVDLLCRSGQIQRTLD 409
Query: 369 TALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVG 428
+P D +W ++L AC HG+V+ +++ +E G+ V++ N+ A
Sbjct: 410 LISDMPLP-ADAKIWGSVLNACRSHGDVDTAVLAAERLVALEPEDVGNLVMLANVYAAAR 468
Query: 429 RFGDAERLRRVMDERNAFKVPGCSLV 454
R+ + R+ + R+ K PGCSL+
Sbjct: 469 RWSEVANTRKAIRSRSMRKTPGCSLI 494
>gi|147819809|emb|CAN60740.1| hypothetical protein VITISV_030210 [Vitis vinifera]
Length = 1033
Score = 277 bits (708), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 153/454 (33%), Positives = 248/454 (54%), Gaps = 40/454 (8%)
Query: 30 HSQLFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSH 89
+S +F L+ +S +P ++ +LY ++ +S F+ +++ C L
Sbjct: 71 NSFIFFALIKGFSDTSNPVESLILYARMLSCLNYSSGV------EFSIPSVLKACGKLLA 124
Query: 90 PNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITG 149
+ G Q+H + K +V ++V MY+ G ++ + ++FD MP R++V+WN MI G
Sbjct: 125 FDEGRQVHGQVLKTHLWFDPFVGNSMVRMYIDFGEIELARRVFDRMPNRDVVSWNSMIAG 184
Query: 150 LVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSN--------------------- 188
+K GE+E A LF+EMP R++VS +IDGY + R
Sbjct: 185 YLKAGEIELASELFDEMPERDLVSCNAMIDGYGKCGRCELAEKVFETMSDKDVVTWTSMI 244
Query: 189 ----------EALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGF 238
+AL LFR+M++ P I++VL AI G V+ + +H Y
Sbjct: 245 SAYVQNRCPMKALDLFREMLSLG-LRPDGPAIVSVLSAIADLGFVEEGKWLHAYVSMNKI 303
Query: 239 TAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVEN 298
+ + LID Y+KCG I +A +F IS R+N+ W S+ISG A+HG+ +EA++
Sbjct: 304 ELSSGFIGSALIDMYSKCGYIENAYHVFRSIS-HRRNIGDWNSMISGLAIHGLAREALDI 362
Query: 299 FGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLG 358
F M+++ ++PN +TFL +L+ CSHGGLVEEG +F+ M E+ +++P I+HYGC+ID+ G
Sbjct: 363 FVEMERMDIEPNEITFLGLLSTCSHGGLVEEGQFYFESMHEKYKIVPRIQHYGCMIDLFG 422
Query: 359 RAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYV 418
RAGRLE A +P E D++ W+ +L A HG++E+G+ + +E+ YV
Sbjct: 423 RAGRLEDALGVIQNMPFE-ADLLAWKAILSASMKHGHIEIGKSAALRAIELAPDDSSSYV 481
Query: 419 LMYNILAGVGRFGDAERLRRVMDERNAFKVPGCS 452
L+ NI A GR+ D ++R +M +R K+ GCS
Sbjct: 482 LLSNIYAKAGRWDDVAKIRLMMRQRGVKKIAGCS 515
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 134/319 (42%), Gaps = 66/319 (20%)
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVAC-EYTEPSEITILA 212
G L++A S+F + N + +I G++ + E+L L+ +M++C Y+ E +I +
Sbjct: 55 GGLDYASSVFSRIQHPNSFIFFALIKGFSDTSNPVESLILYARMLSCLNYSSGVEFSIPS 114
Query: 213 VLPAIWQNGDVKSCQLIHG-----------------------YGE----KRGFTAF---D 242
VL A + + +HG +GE +R F D
Sbjct: 115 VLKACGKLLAFDEGRQVHGQVLKTHLWFDPFVGNSMVRMYIDFGEIELARRVFDRMPNRD 174
Query: 243 IRVLNCLIDTYAKCGCIFSASKLFEDI-----------------------------SVER 273
+ N +I Y K G I AS+LF+++ ++
Sbjct: 175 VVSWNSMIAGYLKAGEIELASELFDEMPERDLVSCNAMIDGYGKCGRCELAEKVFETMSD 234
Query: 274 KNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNF 333
K++V+WTS+IS + + +A++ F M +GL+P+ +SVL+A + G VEEG +
Sbjct: 235 KDVVTWTSMISAYVQNRCPMKALDLFREMLSLGLRPDGPAIVSVLSAIADLGFVEEG-KW 293
Query: 334 FDKMVEECEVLPDIKHYG-CLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSF 392
V ++ G LIDM + G +E A I S ++ W +++ +
Sbjct: 294 LHAYVSMNKIELSSGFIGSALIDMYSKCGYIENAYHVFRSI-SHRRNIGDWNSMISGLAI 352
Query: 393 HGNVEMGERVTRKILEMER 411
HG + +EMER
Sbjct: 353 HG---LAREALDIFVEMER 368
>gi|356524120|ref|XP_003530680.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g40405-like [Glycine max]
Length = 616
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 161/441 (36%), Positives = 247/441 (56%), Gaps = 15/441 (3%)
Query: 19 SHLLTTNSLLHHSQ---LF--NTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFD 73
++L N LL+H+ LF N+++ YS + +P K+F Y + ++ SP D
Sbjct: 57 TNLDYANKLLNHNNNPTLFTLNSMIRAYSKSSTPSKSFHFYANILHSNNNNLSP-----D 111
Query: 74 SFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFD 133
++T++FL+RTCA L G +H + K GF+ +V T LV MY LG L +FD
Sbjct: 112 NYTFTFLVRTCAQLQAHVTGLCVHGAVIKHGFELDPHVQTGLVFMYAELGCLSSCHNVFD 171
Query: 134 EMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALAL 193
E +LVT M+ K G+++FAR +F+EMP R+ V+W +I GY + RS EAL +
Sbjct: 172 GAVEPDLVTQTAMLNACAKCGDIDFARKMFDEMPERDHVTWNAMIAGYAQCGRSREALDV 231
Query: 194 FRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTY 253
F M E + +E++++ VL A + + +H Y E R + + L+D Y
Sbjct: 232 FHLM-QMEGVKLNEVSMVLVLSACTHLQVLDHGRWVHAYVE-RYKVRMTVTLGTALVDMY 289
Query: 254 AKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVT 313
AKCG + A ++F ++ +N+ +W+S I G AM+G G+E+++ F M++ G++PN +T
Sbjct: 290 AKCGNVDRAMQVF--WGMKERNVYTWSSAIGGLAMNGFGEESLDLFNDMKREGVQPNGIT 347
Query: 314 FLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGI 373
F+SVL CS GLVEEG FD M + P ++HYG ++DM GRAGRL++A +
Sbjct: 348 FISVLKGCSVVGLVEEGRKHFDSMRNVYGIGPQLEHYGLMVDMYGRAGRLKEALNFINSM 407
Query: 374 PSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDA 433
P V W LL AC + N E+GE RKI+E+E G YVL+ NI A +
Sbjct: 408 PMR-PHVGAWSALLHACRMYKNKELGEIAQRKIVELEDKNDGAYVLLSNIYADYKNWESV 466
Query: 434 ERLRRVMDERNAFKVPGCSLV 454
LR+ M + K+PGCS++
Sbjct: 467 SSLRQTMKAKGVKKLPGCSVI 487
>gi|224134923|ref|XP_002327523.1| predicted protein [Populus trichocarpa]
gi|222836077|gb|EEE74498.1| predicted protein [Populus trichocarpa]
Length = 635
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 158/438 (36%), Positives = 241/438 (55%), Gaps = 30/438 (6%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+N + YS P+ LY ++ + + P D +TY FL + LG
Sbjct: 82 WNIMFKGYSRIACPKLGVSLYLEMLE------RNVKP--DCYTYPFLFKGFTRSVALQLG 133
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMI------ 147
+LH + K G S+V+ + AL+NMY G + + +FD + ++VTWN MI
Sbjct: 134 RELHCHVVKYGLDSNVFAHNALINMYSLCGLIDMARGIFDMSCKSDVVTWNAMISGYNRI 193
Query: 148 -----------TGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRK 196
TG V G+++ AR F +MP R+ VSWT +IDGY R+N EAL LFR+
Sbjct: 194 KKDVISWTAIVTGFVNTGQVDAARKYFHKMPERDHVSWTAMIDGYLRLNCYKEALMLFRE 253
Query: 197 MVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKC 256
M + +P E T+++VL A Q G ++ + I Y +K D V N LID Y KC
Sbjct: 254 MQTSK-IKPDEFTMVSVLTACAQLGALELGEWIRTYIDKNKVKN-DTFVGNALIDMYFKC 311
Query: 257 GCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLS 316
G + A +F ++ +++ +WT+++ G A++G G+EA+ F +M K + P+ VT++
Sbjct: 312 GNVEMALSIFN--TLPQRDKFTWTAMVVGLAINGCGEEALNMFSQMLKASVTPDEVTYVG 369
Query: 317 VLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSE 376
VL+AC+H G+V+EG FF M + P+I HYGC++D+LG+AG L++A + +P +
Sbjct: 370 VLSACTHTGMVDEGKKFFASMTARHGIEPNIAHYGCMVDLLGKAGHLKEAHEIIKNMPMK 429
Query: 377 ITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERL 436
+ +VW LLGAC H + EM ER +ILE+E G YVL NI A ++ L
Sbjct: 430 -PNSIVWGALLGACRIHKDAEMAERAIEQILELEPNNGAVYVLQCNIYAACNKWDKLREL 488
Query: 437 RRVMDERNAFKVPGCSLV 454
R+VM +R K PGCSL+
Sbjct: 489 RQVMMDRGIKKTPGCSLI 506
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 127/290 (43%), Gaps = 53/290 (18%)
Query: 152 KWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITIL 211
++G++ +AR LF+ +P +V SW + GY+R+ ++L+ +M+ +P T
Sbjct: 60 EFGDMCYARQLFDTIPEPSVFSWNIMFKGYSRIACPKLGVSLYLEMLE-RNVKPDCYTYP 118
Query: 212 AVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISV 271
+ ++ ++ + +H + K G + ++ N LI+ Y+ CG I A +F D+S
Sbjct: 119 FLFKGFTRSVALQLGRELHCHVVKYGLDS-NVFAHNALINMYSLCGLIDMARGIF-DMSC 176
Query: 272 E----------------RKNLVSWTSIISGFA-----------MHGMG------------ 292
+ +K+++SWT+I++GF H M
Sbjct: 177 KSDVVTWNAMISGYNRIKKDVISWTAIVTGFVNTGQVDAARKYFHKMPERDHVSWTAMID 236
Query: 293 --------KEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVL 344
KEA+ F MQ +KP+ T +SVL AC+ G +E G + +++ +V
Sbjct: 237 GYLRLNCYKEALMLFREMQTSKIKPDEFTMVSVLTACAQLGALELG-EWIRTYIDKNKVK 295
Query: 345 PDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHG 394
D LIDM + G +E A +P D W ++ + +G
Sbjct: 296 NDTFVGNALIDMYFKCGNVEMALSIFNTLPQR--DKFTWTAMVVGLAING 343
>gi|359477907|ref|XP_002270439.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g04840-like [Vitis vinifera]
Length = 677
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 151/417 (36%), Positives = 237/417 (56%), Gaps = 40/417 (9%)
Query: 73 DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLF 132
D T F++++ A L LG LH + K+G + +V +LV+MYV +G L +LF
Sbjct: 137 DRLTLPFVLKSVAALVDVGLGRCLHGGVMKLGLEFDSFVRVSLVDMYVKIGELGFGLQLF 196
Query: 133 DE-----------------------------------MPERNLVTWNVMITGLVKWGELE 157
DE MPERN +WN +I G V+ G+L+
Sbjct: 197 DESPQRNKAESILLWNVLINGCCKVGDLSKAASLFEAMPERNAGSWNSLINGFVRNGDLD 256
Query: 158 FARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAI 217
AR LF +MP +NVVSWT +I+G+++ +AL++F +M+ E P+++T+++ L A
Sbjct: 257 RARELFVQMPEKNVVSWTTMINGFSQNGDHEKALSMFWRMLE-EGVRPNDLTVVSALLAC 315
Query: 218 WQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLV 277
+ G ++ + IH Y GF + + L+D YAKCG I SAS++F + + K+L+
Sbjct: 316 TKIGALQVGERIHNYLSSNGFQ-LNRGIGTALVDMYAKCGNIKSASRVF--VETKGKDLL 372
Query: 278 SWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKM 337
+W+ +I G+A+HG +A++ F +M+ G+ P+ V FL++L ACSH G V++GLNFF+ M
Sbjct: 373 TWSVMIWGWAIHGCFDQALQCFVKMKSAGINPDEVIFLAILTACSHSGNVDQGLNFFESM 432
Query: 338 VEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVE 397
+ + P +KHY ++D+LGRAGRL++A +P D V+W L AC H N+E
Sbjct: 433 RLDYSIEPTMKHYTLIVDLLGRAGRLDEALSFIQSMPIN-PDFVIWGALFCACRAHKNIE 491
Query: 398 MGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
M E K+L++E + G YV + N+ A VGR+ D ER+R +M R K PG S +
Sbjct: 492 MAELTAEKLLQLEPKHPGSYVFLSNVYAAVGRWEDVERVRTLMKNRGVEKDPGWSYI 548
Score = 41.6 bits (96), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 90/217 (41%), Gaps = 36/217 (16%)
Query: 244 RVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQ 303
RV+ LI + + A +F + NL + ++I G A + + +V +F M
Sbjct: 73 RVVTQLISSSCSLKSLDYALSIFR--CFDHPNLFVFNALIRGLAENSRFEGSVSHFVLML 130
Query: 304 KVGLKPNRVTFLSVLNA-----------CSHGGLVEEGLNFFDKMVEECEVLPDIKHYGC 352
++ ++P+R+T VL + C HGG+++ GL FD V
Sbjct: 131 RLSIRPDRLTLPFVLKSVAALVDVGLGRCLHGGVMKLGLE-FDSFVRV-----------S 178
Query: 353 LIDMLGRAGRLEQAEKTALGIP--SEITDVVVWRTLLGACSFHGNVEMGERVTRKILEME 410
L+DM + G L + P ++ +++W L+ C G++ + + E
Sbjct: 179 LVDMYVKIGELGFGLQLFDESPQRNKAESILLWNVLINGCCKVGDLSKAASLFEAMPERN 238
Query: 411 RGYGGDYVLMYNILAGVGRFGDAERLRRV---MDERN 444
G +++ G R GD +R R + M E+N
Sbjct: 239 AGSWN------SLINGFVRNGDLDRARELFVQMPEKN 269
>gi|225445484|ref|XP_002282063.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 533
Score = 276 bits (707), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 163/462 (35%), Positives = 256/462 (55%), Gaps = 26/462 (5%)
Query: 2 HILQNSQTPNNITTQIHSHLLTTNSLLHHSQLFNTLLHFYSLAESPQKAFLLYKQLQQIY 61
+L + T NN + H+ L+ N L + ++N+++ Y L+ SP +A L Y +
Sbjct: 48 QLLSLAATSNNPSFFSHACLIFQNLSLRNIFMYNSMIRGYVLSHSPTRAILCYLDMLNYG 107
Query: 62 THSHSPLPPLFDSFTYSFLIRTCATLSHPN--LGTQLHAVISKVGFQSHVYVNTALVNMY 119
L +++T+ LI+ C TL + +G +HA + GF +V +AL+ Y
Sbjct: 108 L--------LANNYTFPPLIKACTTLGSSSKLIGCLVHAHVVTFGFDEDPFVVSALIEFY 159
Query: 120 VSLGF-LKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGII 178
SL F + + LFD +P R++V W MI G K G++E AR LFE+MP RN +SW+ ++
Sbjct: 160 -SLNFDMGTARTLFDRIPNRDVVLWTAMIDGYGKMGDVEHARILFEDMPERNAISWSAVM 218
Query: 179 DGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGF 238
Y+R+ E L LFR+M T P+E +++VL A G + +H Y ++ F
Sbjct: 219 AAYSRVGDFKEVLCLFRRMQEAG-TMPNESVLVSVLTACAHLGALAQGLWVHSYAKQCNF 277
Query: 239 TAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVEN 298
+ I + L+D Y+KCGC+ SA F+ I K+ +W ++ISG AM+G +++E
Sbjct: 278 DSNPI-LATALVDMYSKCGCVESALSTFQGIP--NKDAGAWNAMISGVAMNGDAWKSLEL 334
Query: 299 FGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLG 358
F +M G +P TF++VL AC+H LV+EGL F++M V P ++HY CL+D++
Sbjct: 335 FNKMISNGTQPTETTFVAVLTACTHARLVKEGLKLFEQMSSNYGVEPQLEHYACLVDLMA 394
Query: 359 RAGRLEQAEK------TALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERG 412
RAG L +AEK LG D VW +LGAC +GN+E+G RV +K+ +M
Sbjct: 395 RAGMLAEAEKFIEEKMGGLG----RGDANVWGAMLGACRTYGNIEVGNRVWKKLADMGVA 450
Query: 413 YGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
G +VL YN+ G +A+R+RR++ E K PGCS++
Sbjct: 451 DCGTHVLSYNLYREAGWDMEAKRVRRLISEAGMKKKPGCSII 492
>gi|296084925|emb|CBI28334.3| unnamed protein product [Vitis vinifera]
Length = 604
Score = 276 bits (707), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 149/423 (35%), Positives = 242/423 (57%), Gaps = 21/423 (4%)
Query: 30 HSQLFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSH 89
+S +F L+ +S +P ++ +LY ++ +S F+ +++ C L
Sbjct: 71 NSFIFFALIKGFSDTSNPVESLILYARMLSCLNYSSGV------EFSIPSVLKACGKLLA 124
Query: 90 PNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITG 149
+ G Q+H + K +V ++V MY+ G ++ + ++FD MP R++V+WN MI G
Sbjct: 125 FDEGRQVHGQVLKTHLWFDPFVGNSMVRMYIDFGEIELARRVFDRMPNRDVVSWNSMIAG 184
Query: 150 LVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEIT 209
+K GE+E A LF+EMP R++VS +IDGY + E L+L + P
Sbjct: 185 YLKAGEIELASELFDEMPERDLVSCNAMIDGYGK-----EMLSLGLR--------PDGPA 231
Query: 210 ILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDI 269
I++VL AI G V+ + +H Y + + LID Y+KCG I +A +F I
Sbjct: 232 IVSVLSAIADLGFVEEGKWLHAYVSMNKIELSSGFIGSALIDMYSKCGYIENAYHVFRSI 291
Query: 270 SVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEE 329
S R+N+ W S+ISG A+HG+ +EA++ F M+++ ++PN +TFL +L+ CSHGGLVEE
Sbjct: 292 S-HRRNIGDWNSMISGLAIHGLAREALDIFVEMERMDIEPNEITFLGLLSTCSHGGLVEE 350
Query: 330 GLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGA 389
G +F+ M E+ +++P I+HYGC+ID+ GRAGRLE A +P E D++ W+ +L A
Sbjct: 351 GQFYFESMHEKYKIVPRIQHYGCMIDLFGRAGRLEDALGVIQNMPFE-ADLLAWKAILSA 409
Query: 390 CSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVP 449
HG++E+G+ + +E+ YVL+ NI A GR+ D ++R +M +R K+
Sbjct: 410 SMKHGHIEIGKSAALRAIELAPDDSSSYVLLSNIYAKAGRWDDVAKIRLMMRQRGVKKIA 469
Query: 450 GCS 452
GCS
Sbjct: 470 GCS 472
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 76/306 (24%), Positives = 136/306 (44%), Gaps = 36/306 (11%)
Query: 134 EMPERNLVTWNVMITGLVKW-------GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNR 186
+M + NL+ ++ L+ + G L++A S+F + N + +I G++ +
Sbjct: 28 QMIKTNLLNHQFTVSRLIAFCSLSGVSGGLDYASSVFSRIQHPNSFIFFALIKGFSDTSN 87
Query: 187 SNEALALFRKMVAC-EYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRV 245
E+L L+ +M++C Y+ E +I +VL A + + +HG K FD V
Sbjct: 88 PVESLILYARMLSCLNYSSGVEFSIPSVLKACGKLLAFDEGRQVHGQVLKTHLW-FDPFV 146
Query: 246 LNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQK- 304
N ++ Y G I A ++F+ + +++VSW S+I+G+ G + A E F M +
Sbjct: 147 GNSMVRMYIDFGEIELARRVFD--RMPNRDVVSWNSMIAGYLKAGEIELASELFDEMPER 204
Query: 305 ------------------VGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPD 346
+GL+P+ +SVL+A + G VEEG + V ++
Sbjct: 205 DLVSCNAMIDGYGKEMLSLGLRPDGPAIVSVLSAIADLGFVEEG-KWLHAYVSMNKIELS 263
Query: 347 IKHYG-CLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRK 405
G LIDM + G +E A I S ++ W +++ + HG +
Sbjct: 264 SGFIGSALIDMYSKCGYIENAYHVFRSI-SHRRNIGDWNSMISGLAIHG---LAREALDI 319
Query: 406 ILEMER 411
+EMER
Sbjct: 320 FVEMER 325
>gi|357477567|ref|XP_003609069.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355510124|gb|AES91266.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 611
Score = 276 bits (707), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 170/489 (34%), Positives = 262/489 (53%), Gaps = 55/489 (11%)
Query: 1 MHILQNSQTPNNITTQIHSHLLTTNSLLHHSQLFNTLL---------HF--YSLA---ES 46
+ +L N T T QIH+HL T L H F LL H YSL
Sbjct: 13 LSLLSNCNTTLKTTKQIHTHLYVTG-LHTHPFFFGKLLLNCAVSISDHVLNYSLRLFHHF 71
Query: 47 PQKAFLLYKQLQQIYTHSHSPL------------PPLF-DSFTYSFLIRTCATLS-HPNL 92
P +Y L + +HS +PL P L DSF+++F ++ A
Sbjct: 72 PNPDTFMYNTLIRSLSHSSTPLSSLQPFIQLLRHPTLLPDSFSFAFTLKGIANDGCSKRQ 131
Query: 93 GTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVK 152
G QLH+ + GF H++V T L++MY G + + K+FDEM + N+V WN ++T +
Sbjct: 132 GIQLHSHAFRHGFDDHIFVGTTLISMYAECGCYEYARKVFDEMSQPNVVAWNAVVTACFR 191
Query: 153 WG-------ELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEP 205
G + +F EM R+ SW+ +I G+ + ++A F++++ + P
Sbjct: 192 CGMWRVLGVSFGWREVVFCEMKMRDDASWSTMIVGFAKSGSFHDAFGFFKELLR-DRNRP 250
Query: 206 SEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKL 265
SE+++ VL A Q G + +++HG+ EK GF + V N LIDTY+KCG + +KL
Sbjct: 251 SEVSLTGVLSACAQAGAFEFGKILHGFMEKAGFLCI-VSVNNALIDTYSKCGNV-DMAKL 308
Query: 266 FEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGG 325
+IS+ AMHG EA+ F M++ G++P+ VTF+S+L ACSH G
Sbjct: 309 VFNISL---------------AMHGRADEAIRVFHEMEESGVRPDGVTFISLLYACSHSG 353
Query: 326 LVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRT 385
LVE+G F KM + P I+HYGC++D+ GRA RL++A + +P + +V++WRT
Sbjct: 354 LVEQGCALFSKMRNFYGIEPAIEHYGCMVDLYGRAARLQKAYEFIRQMPI-LPNVIIWRT 412
Query: 386 LLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNA 445
LLGACS HGN+E+ E V ++ EM+ GD+VL+ N+ A G++ D +RR M E++
Sbjct: 413 LLGACSIHGNIELAELVKARLAEMDPNNSGDHVLLSNVYAVAGKWKDVAGIRRTMIEQSM 472
Query: 446 FKVPGCSLV 454
K+PG S++
Sbjct: 473 KKIPGWSMI 481
>gi|224075377|ref|XP_002304609.1| predicted protein [Populus trichocarpa]
gi|222842041|gb|EEE79588.1| predicted protein [Populus trichocarpa]
Length = 431
Score = 276 bits (707), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 156/440 (35%), Positives = 253/440 (57%), Gaps = 18/440 (4%)
Query: 19 SHLLTTNSLLHHSQLFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYS 78
SH L + + +NT + A SP KA Q+YTH H P FD+F+
Sbjct: 6 SHFLKSTKWQIPRKSYNTWVLAIKNASSPHKAL-------QLYTHMHRQSIP-FDTFSIL 57
Query: 79 FLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPER 138
F +++C L + + LH+ I K+GF +HVYV+T L++ Y + F + LFDEMP+R
Sbjct: 58 FTLKSCTHLKNLTIIHHLHSHIIKLGFNTHVYVSTCLLHAYAVMSF-DQACDLFDEMPQR 116
Query: 139 NLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMV 198
N+VTWN MITG + G + ARSLFE MP R+ SW+ +I Y ++ L+ F++M+
Sbjct: 117 NIVTWNTMITGYSRSGSINKARSLFEAMPVRDAASWSAMITCYINNGFRDQGLSFFQEMM 176
Query: 199 ACEYTEPSEITILAVLPAIWQNGDVK--SCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKC 256
A E +P ++T+ +VL G + + + +HG+ K G+ ++ + L+D YAKC
Sbjct: 177 ANENPKPDQVTVGSVLSGCAHMGSLGLLAGKSVHGFVVKNGW-ELNVDIGTLLVDMYAKC 235
Query: 257 GCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLS 316
G +A +F + ++ +N+ +WT++I G A HG +E + F MQ+ G++PN +TF
Sbjct: 236 GFFKNAVWVF--VLMQERNVSTWTALICGAAQHGFCQEVLSLFKMMQEAGVRPNEMTFTG 293
Query: 317 VLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSE 376
+LNAC+ GL+EEG +F KM++E + P I+HYGC++DM G+AG LE+A + + E
Sbjct: 294 ILNACARKGLIEEGRKYF-KMIKETGLEPRIQHYGCMVDMFGKAGLLEEAYEVIKEMEFE 352
Query: 377 ITDVVVWRTLLGACSFHGNVEMGERVTRKILE--MERGYGGDYVLMYNILAGVGRFGDAE 434
++V+W + L AC H ++ +RV ++L GG Y L+ ++ ++ DAE
Sbjct: 353 -PNIVIWGSFLSACKMHKQFDIADRVIGQVLRDIKPENDGGIYSLVSDLYVLNKKWDDAE 411
Query: 435 RLRRVMDERNAFKVPGCSLV 454
R+R ++ +N K G S +
Sbjct: 412 RVRNLVLNQNVRKARGSSCI 431
>gi|357503973|ref|XP_003622275.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355497290|gb|AES78493.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 541
Score = 276 bits (707), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 146/428 (34%), Positives = 247/428 (57%), Gaps = 11/428 (2%)
Query: 32 QLFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHP- 90
+++N ++ Y E + YK L + + P ++ T+ FL++ C+ L +
Sbjct: 88 RVYNIMIRSYGCIEGGDDSNCCYKALMLYKQMLNKGIVP--NNLTFPFLVKGCSRLQYGG 145
Query: 91 NLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGL 150
+G +HA + K GF + V+V +L++++++ G K++ K+FDEM R++V+WN M+ G
Sbjct: 146 TVGEVIHAHVLKFGFLNDVFVGNSLISLFMNFGLSKNARKVFDEMFVRDVVSWNSMVVGY 205
Query: 151 VKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKM---VACEYTEPSE 207
++ GE+E A +LF +M RN+++W II G + + E+L +F +M + +P +
Sbjct: 206 LRNGEVEMALNLFRKMNGRNIITWNSIITGLVQAGHAKESLEIFHEMQFLSGDDVVKPDK 265
Query: 208 ITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFE 267
ITI +VL A G + + +H Y K D+ + L++ Y KCG + A ++F
Sbjct: 266 ITIASVLSACALLGSIDHGKWVHAYLRKNDIEC-DVVIGTALVNMYGKCGDVQQAIEIFN 324
Query: 268 DISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLV 327
D+ K+ +WT++IS FA+HG GK+A + F M+K G+KPN VTF+ +L+ACSH GLV
Sbjct: 325 DMP--EKDASAWTAMISVFALHGFGKKAFDCFLEMEKAGVKPNHVTFVGLLSACSHSGLV 382
Query: 328 EEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLL 387
E+G FD M + P I HY C++D+L RA ++A +P + DV VW LL
Sbjct: 383 EQGRCCFDVMKRVYSIEPQIYHYACMVDILSRARLFDEALFLIRSMPMK-PDVYVWGALL 441
Query: 388 GACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERN-AF 446
G C HGN+++GE+V ++++E Y+ + +I G++ A+R+R M ER
Sbjct: 442 GGCQMHGNIKLGEKVAHYLIDLEPHNHAFYINLCDIYVKAGKYDAAKRIRNSMKERGIET 501
Query: 447 KVPGCSLV 454
K+PGCS++
Sbjct: 502 KIPGCSII 509
>gi|225433481|ref|XP_002264386.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g03510 [Vitis vinifera]
gi|298205226|emb|CBI17285.3| unnamed protein product [Vitis vinifera]
Length = 430
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 144/398 (36%), Positives = 227/398 (57%), Gaps = 5/398 (1%)
Query: 59 QIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNM 118
++ H H+ P D+F + +++CA PNLG +HA ++K S+ +V ALV+M
Sbjct: 32 SLFHHMHASSAPALDAFVFPLALKSCAAAHRPNLGAAIHAHVTKFSLVSNPFVACALVDM 91
Query: 119 YVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCR-NVVSWTGI 177
Y + + LFDE+P RN+V WN MI+ G + A LFE M N ++ I
Sbjct: 92 YGKCVSVSSARHLFDEIPHRNIVVWNAMISIYTHSGRVADALGLFEVMDVEPNASTFNAI 151
Query: 178 IDGYTRM-NRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKR 236
I G + + + S +AL+ +R+M + + IT+LA+LPA + + IHGY +
Sbjct: 152 ISGLSGLEDGSFKALSFYRRMGEVGLKQ-NLITLLALLPACVDLAALTLIKEIHGYAIRN 210
Query: 237 GFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAV 296
G + +CL++ Y +CGCI ++ +F+ IS+ +++V+W+S+IS +A+HG + A+
Sbjct: 211 GIDPHP-HLRSCLVEAYGRCGCIVNSQCVFQSISMSERDVVAWSSLISAYALHGDARTAL 269
Query: 297 ENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDM 356
E F +M+ ++P+ +TFL VL ACSH GL +E L +F +M ++ V HY C++D
Sbjct: 270 ETFEQMEMAKVQPDGITFLGVLKACSHAGLADEALGYFGRMCKDYGVEASSDHYSCVVDA 329
Query: 357 LGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGD 416
L RAGRL +A + G+P + T W LLGAC +G VE+ E R + E+E +
Sbjct: 330 LSRAGRLYEAYEIIQGMPVKST-AKTWGALLGACRTYGEVELAEIAGRALFELEPDNAAN 388
Query: 417 YVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
YVL+ I A VGR +A+R+RR M+E PG S V
Sbjct: 389 YVLLARIYASVGRHEEAQRMRREMNEMGVKAAPGSSWV 426
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 108/278 (38%), Gaps = 75/278 (26%)
Query: 171 VVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIH 230
++S+T ++ + R ++AL+LF M A + P+ L A +KSC H
Sbjct: 11 LLSYTKLLASHVNQGRHHDALSLFHHMHAS--SAPA-------LDAFVFPLALKSCAAAH 61
Query: 231 ----GYGEKRGFTAFDIR----VLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSI 282
G T F + V L+D Y KC + SA LF++I +N+V W ++
Sbjct: 62 RPNLGAAIHAHVTKFSLVSNPFVACALVDMYGKCVSVSSARHLFDEI--PHRNIVVWNAM 119
Query: 283 ISGFAMHGMGKEAVENFG---------------------------------RMQKVGLKP 309
IS + G +A+ F RM +VGLK
Sbjct: 120 ISIYTHSGRVADALGLFEVMDVEPNASTFNAIISGLSGLEDGSFKALSFYRRMGEVGLKQ 179
Query: 310 NRVTFLSVLNACS-----------HGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLG 358
N +T L++L AC HG + G++ P CL++ G
Sbjct: 180 NLITLLALLPACVDLAALTLIKEIHGYAIRNGID------------PHPHLRSCLVEAYG 227
Query: 359 RAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNV 396
R G + ++ I DVV W +L+ A + HG+
Sbjct: 228 RCGCIVNSQCVFQSISMSERDVVAWSSLISAYALHGDA 265
>gi|255540011|ref|XP_002511070.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550185|gb|EEF51672.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 551
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 155/448 (34%), Positives = 257/448 (57%), Gaps = 14/448 (3%)
Query: 1 MHILQNSQTPNNITTQIHSHLLTTNSLLHHSQL-FNTLLHFYSLAESPQKAFLLYKQLQQ 59
++ L TP + + +H + T +++ + S +N ++ ++L S A + Q+++
Sbjct: 71 LYALTTIPTPKSSFSLLHYAVSTFDNIQNPSTFCYNVIIRLHTLHSSALSALHFFLQMRR 130
Query: 60 IYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMY 119
+PP F S Y F ++ CA L +L LH+ + K GF S +YV +L+++Y
Sbjct: 131 F------SVPPDFHS--YPFALKACAHLRVLSLAQCLHSQVFKFGFVSDLYVINSLIHVY 182
Query: 120 VSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIID 179
L + ++FDE +R++V++N ++ G VK GE AR +F+ MP R+ VSW +I
Sbjct: 183 SLFDCLNYACQVFDESSDRDVVSYNALVDGFVKAGEFVKAREIFDLMPMRDSVSWGSLIA 242
Query: 180 GYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFT 239
GY + + NEA+ LF M+ + EP I +++ L A Q G+++ + IH Y +K
Sbjct: 243 GYAQGSYCNEAIGLFDLMMGLK-LEPDNIALVSALSACAQLGELEKGKQIHDYIKKNRIQ 301
Query: 240 AFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENF 299
A D + L+D YAK GCI +A K+FE +S + K+L++W +++ G AMHG + F
Sbjct: 302 A-DSFLSTGLVDFYAKSGCIDTAIKVFE-LSPD-KSLITWNAMLIGIAMHGNSHLLLNYF 358
Query: 300 GRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGR 359
RM + G+KP+ ++FL VL CSHGGLV+E FD+M V ++KHYGC+ D+L R
Sbjct: 359 SRMMEAGIKPDGISFLGVLVGCSHGGLVDEAKKLFDEMESIYGVRRELKHYGCMADLLAR 418
Query: 360 AGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVL 419
AG +++A + G+P D+ VW LLG C HGN+E+ E+ ++++E++ GG Y +
Sbjct: 419 AGLIKEAVELTKGLPMG-GDIFVWSGLLGGCRIHGNIEIAEQAAKQVMELKPEDGGVYSI 477
Query: 420 MYNILAGVGRFGDAERLRRVMDERNAFK 447
+ N+ A R+ D ++RR M A K
Sbjct: 478 LANVYANADRWEDVVKIRRSMSSNRAVK 505
>gi|255570475|ref|XP_002526196.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534500|gb|EEF36200.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 491
Score = 276 bits (705), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 158/429 (36%), Positives = 247/429 (57%), Gaps = 14/429 (3%)
Query: 27 LLHHSQ-LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCA 85
L H S ++NT++ ++ P+KA +L+K + +Y++ LP +++TYSFL + C
Sbjct: 71 LRHRSTFIWNTVIRAFAEKNEPRKAIMLFKNM--LYSNF---LP---NNYTYSFLFKACT 122
Query: 86 TLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNV 145
L++ LG H K+G++ + +V LV+M+ G + + KLFD R+++TW
Sbjct: 123 DLNNLYLGLACHCQSIKLGWEFYDFVQNGLVHMFAIFGCMDSARKLFDLSSNRDVITWTA 182
Query: 146 MITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEP 205
+I G V+ G++ R LF++MP RN VSW+ +I GY R+ EAL LF M+ + P
Sbjct: 183 LINGYVRAGQVLIGRELFDKMPERNSVSWSAMITGYVRVGFFEEALELFNAMLISGFW-P 241
Query: 206 SEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKL 265
+ I+ + A G + + IH Y KR D + LID YAKCGCI A +
Sbjct: 242 NHAGIVCAINACASLGALDQGRWIHCY-IKRNRMDLDRVMGAALIDMYAKCGCIEIACSI 300
Query: 266 FEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGG 325
F ++ +++ +T +ISG A HG AVE F RM G+ PN VTF+SVLNACS G
Sbjct: 301 FGEL--RNRDVHVYTCLISGLANHGQSATAVELFERMHSEGVVPNEVTFVSVLNACSRMG 358
Query: 326 LVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRT 385
LV++GL F+ M + P ++HYGCL+D+LGRAG+LE+A+K +P + D V
Sbjct: 359 LVDKGLRIFENMSKIYGDEPQVQHYGCLVDLLGRAGKLEEAKKLVKEMPMK-PDSYVLGA 417
Query: 386 LLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNA 445
LL A +G+VE+GE + ++ + G +V++ N+ A ++ + R+RR M ++
Sbjct: 418 LLNASRVYGDVELGEETVESLAQLSLDHSGVHVVLSNMYASANKWDEVARVRRGMGDKKV 477
Query: 446 FKVPGCSLV 454
KVPGCSL+
Sbjct: 478 RKVPGCSLI 486
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 93/420 (22%), Positives = 170/420 (40%), Gaps = 86/420 (20%)
Query: 79 FLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVS---LGFLKDSS------ 129
FL+ C T+S I ++ Q+H+ V+ L + Y + + F SS
Sbjct: 15 FLLDKCRTISQ----------IKQI--QTHLTVSGTLKDPYAAAKIISFCALSSNQFSLS 62
Query: 130 ---KLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVV----SWTGIIDGYT 182
+LF + R+ WN +I + E A LF+ M N + +++ + T
Sbjct: 63 HAYRLFLGLRHRSTFIWNTVIRAFAEKNEPRKAIMLFKNMLYSNFLPNNYTYSFLFKACT 122
Query: 183 RMNRSNEALALFRKMVAC-----EYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRG 237
+N LA + + ++ + + + A+ G + S + + R
Sbjct: 123 DLNNLYLGLACHCQSIKLGWEFYDFVQNGLVHMFAIF------GCMDSARKLFDLSSNR- 175
Query: 238 FTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVE 297
D+ LI+ Y + G + +LF+ + +N VSW+++I+G+ G +EA+E
Sbjct: 176 ----DVITWTALINGYVRAGQVLIGRELFDKMP--ERNSVSWSAMITGYVRVGFFEEALE 229
Query: 298 NFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEG--------LNFFD----------KMVE 339
F M G PN + +NAC+ G +++G N D M
Sbjct: 230 LFNAMLISGFWPNHAGIVCAINACASLGALDQGRWIHCYIKRNRMDLDRVMGAALIDMYA 289
Query: 340 ECEVLP------------DIKHYGCLIDMLGRAGRLEQAEKTALGIPSE--ITDVVVWRT 385
+C + D+ Y CLI L G+ A + + SE + + V + +
Sbjct: 290 KCGCIEIACSIFGELRNRDVHVYTCLISGLANHGQSATAVELFERMHSEGVVPNEVTFVS 349
Query: 386 LLGACSFHGNVEMGERVTRKILEMERGYGGD-----YVLMYNILAGVGRFGDAERLRRVM 440
+L ACS G V+ G R+ M + YG + Y + ++L G+ +A++L + M
Sbjct: 350 VLNACSRMGLVDKGLRIFE---NMSKIYGDEPQVQHYGCLVDLLGRAGKLEEAKKLVKEM 406
>gi|224082530|ref|XP_002306730.1| predicted protein [Populus trichocarpa]
gi|222856179|gb|EEE93726.1| predicted protein [Populus trichocarpa]
Length = 578
Score = 276 bits (705), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 166/466 (35%), Positives = 254/466 (54%), Gaps = 61/466 (13%)
Query: 14 TTQIHSHLLTTNSL-LHHSQLFNTLLHFYSLAESPQK-AFLLYKQLQQIYTHS------- 64
T Q+H+HL TT L S + LL Y+L+ A L + Q++ T+
Sbjct: 20 TKQLHAHLFTTGQFRLPISPARSKLLELYALSLGNLSFAILTFSQIRTPSTNDWNAIIRG 79
Query: 65 --HSPLPP--------------LFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSH 108
SP P D+ T SF+++ CA + Q+H I + GF +
Sbjct: 80 FIQSPNPTNAFAWYKSMISKSRKVDALTCSFVLKACARVLARLESIQIHTHIVRKGFIAD 139
Query: 109 VYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPC 168
+ T L+++Y K GE++ A +F+EM
Sbjct: 140 ALLGTTLLDVYA-------------------------------KVGEIDSAEKVFDEMVK 168
Query: 169 RNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQL 228
R++ SW +I G+ + ++ EAL+LF++M + +P+EI++L L A Q GD K +
Sbjct: 169 RDIASWNALISGFAQGSKPTEALSLFKRM-EIDGFKPNEISVLGALSACAQLGDFKEGEK 227
Query: 229 IHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAM 288
IHGY + F + +V N +ID YAKCG + A +FE +S RK++V+W ++I FAM
Sbjct: 228 IHGYIKVERFD-MNAQVCNVVIDMYAKCGFVDKAYLVFESMSC-RKDIVTWNTMIMAFAM 285
Query: 289 HGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIK 348
HG G +A+E F +M + G+ P+ V++L+VL AC+HGGLVEEG F+ M E C V P++K
Sbjct: 286 HGEGCKALELFEKMDQSGVSPDDVSYLAVLCACNHGGLVEEGFRLFNSM-ENCGVKPNVK 344
Query: 349 HYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILE 408
HYG ++D+LGRAGRL +A +P+ + D+V+W+TLLGA H NVE+ E V+RK++E
Sbjct: 345 HYGSVVDLLGRAGRLHEAYDIVNSMPT-VPDIVLWQTLLGASRTHRNVEIAETVSRKLVE 403
Query: 409 MERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
M + GD+VL+ N+ A R+ D R+R M R+ KVPG S +
Sbjct: 404 MGSNHCGDFVLLSNVYAARERWADVGRVREAMKNRDVKKVPGLSYI 449
>gi|356559204|ref|XP_003547890.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Glycine max]
Length = 619
Score = 276 bits (705), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 142/359 (39%), Positives = 221/359 (61%), Gaps = 14/359 (3%)
Query: 106 QSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEE 165
Q V + +V+ Y+ LG + + +LFD MP+R++++WN +++G GE+E LFEE
Sbjct: 216 QRDVVLWNVVVSGYIELGDMVAARELFDRMPDRDVMSWNTVLSGYATNGEVESFVKLFEE 275
Query: 166 MPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTE----------PSEITILAVLP 215
MP RNV SW G+I GY R EAL F++M+ E P++ T++AVL
Sbjct: 276 MPVRNVYSWNGLIGGYVRNGLFKEALECFKRMLVLVEGEGKEGSDGVVVPNDYTVVAVLT 335
Query: 216 AIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKN 275
A + GD++ + +H Y E G+ ++ V N LID YAKCG I A +F+ + V K+
Sbjct: 336 ACSRLGDLEMGKWVHVYAESIGYKG-NLFVGNALIDMYAKCGVIEKALDVFDGLDV--KD 392
Query: 276 LVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFD 335
+++W +II+G AMHG +A+ F RM++ G +P+ VTF+ +L+AC+H GLV GL F
Sbjct: 393 IITWNTIINGLAMHGHVADALSLFERMKRAGERPDGVTFVGILSACTHMGLVRNGLLHFQ 452
Query: 336 KMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGN 395
MV++ ++P I+HYGC++D+LGRAG +++A +P E D V+W LLGAC + N
Sbjct: 453 SMVDDYSIVPQIEHYGCMVDLLGRAGLIDKAVDIVRKMPME-PDAVIWAALLGACRMYKN 511
Query: 396 VEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
VEM E ++++E+E G++V++ NI +GR D RL+ M + KVPGCS++
Sbjct: 512 VEMAELALQRLIELEPNNPGNFVMVSNIYKDLGRSQDVARLKVAMRDTGFRKVPGCSVI 570
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 101/376 (26%), Positives = 173/376 (46%), Gaps = 67/376 (17%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+N + Y+ A +L+ ++ + SP + FT+ ++++CAT + G
Sbjct: 88 WNAMFRGYAQANCHLDVVVLFARMHRA---GASP-----NCFTFPMVVKSCATANAAKEG 139
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLG--FLKDSSKLFDEMPERNLVTWNVMITGLV 151
++H V++K GF+S+ +V AL++MY G F+ D+ K+F EM ++N+ W ++ V
Sbjct: 140 EEVHCVVAKRGFKSNTFVGCALIHMYSLRGGVFVADAYKVFAEMRDKNVFAWTAIVAAHV 199
Query: 152 KWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITIL 211
++ AR LF+ P R+VV W ++ GY + A LF +M P
Sbjct: 200 ACRDMVSARRLFDLAPQRDVVLWNVVVSGYIELGDMVAARELFDRM-------PDR---- 248
Query: 212 AVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISV 271
D+ N ++ YA G + S KLFE++ V
Sbjct: 249 ------------------------------DVMSWNTVLSGYATNGEVESFVKLFEEMPV 278
Query: 272 ERKNLVSWTSIISGFAMHGMGKEAVENFGRM-------QKVG----LKPNRVTFLSVLNA 320
+N+ SW +I G+ +G+ KEA+E F RM K G + PN T ++VL A
Sbjct: 279 --RNVYSWNGLIGGYVRNGLFKEALECFKRMLVLVEGEGKEGSDGVVVPNDYTVVAVLTA 336
Query: 321 CSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDV 380
CS G +E G + E ++ LIDM + G +E+A G+ ++ D+
Sbjct: 337 CSRLGDLEMG-KWVHVYAESIGYKGNLFVGNALIDMYAKCGVIEKALDVFDGL--DVKDI 393
Query: 381 VVWRTLLGACSFHGNV 396
+ W T++ + HG+V
Sbjct: 394 ITWNTIINGLAMHGHV 409
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 67/130 (51%), Gaps = 4/130 (3%)
Query: 73 DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLF 132
+ +T ++ C+ L +G +H +G++ +++V AL++MY G ++ + +F
Sbjct: 326 NDYTVVAVLTACSRLGDLEMGKWVHVYAESIGYKGNLFVGNALIDMYAKCGVIEKALDVF 385
Query: 133 DEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCR----NVVSWTGIIDGYTRMNRSN 188
D + ++++TWN +I GL G + A SLFE M + V++ GI+ T M
Sbjct: 386 DGLDVKDIITWNTIINGLAMHGHVADALSLFERMKRAGERPDGVTFVGILSACTHMGLVR 445
Query: 189 EALALFRKMV 198
L F+ MV
Sbjct: 446 NGLLHFQSMV 455
Score = 42.4 bits (98), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 39/82 (47%), Gaps = 2/82 (2%)
Query: 249 LIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLK 308
I A+ G I A ++F+ + + N +W ++ G+A + V F RM + G
Sbjct: 60 FITACARLGGIRRARRVFDKTA--QPNGATWNAMFRGYAQANCHLDVVVLFARMHRAGAS 117
Query: 309 PNRVTFLSVLNACSHGGLVEEG 330
PN TF V+ +C+ +EG
Sbjct: 118 PNCFTFPMVVKSCATANAAKEG 139
>gi|218189919|gb|EEC72346.1| hypothetical protein OsI_05579 [Oryza sativa Indica Group]
Length = 545
Score = 276 bits (705), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 153/382 (40%), Positives = 226/382 (59%), Gaps = 5/382 (1%)
Query: 73 DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLF 132
D F + L +G+ +H +I + G S + V ALV+MY G + + +F
Sbjct: 118 DGFAAVGALSASGGLGDQRIGSVVHGLIFRCGLDSELVVCNALVDMYCRCGKFEPARTVF 177
Query: 133 DEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALA 192
D M ++ VTW M+ G +K ++ A S F +MP ++ VSWT +I G+ + + +AL
Sbjct: 178 DRMLVKDEVTWGSMLYGYMKCVGVDSALSFFYQMPMKSTVSWTALITGHVQDKQPIQALE 237
Query: 193 LFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDT 252
LF KM+ E P+ ITI+ VL A G + + IHGYG K T +I V N L+D
Sbjct: 238 LFGKML-LEGHRPNHITIVGVLSACADIGALDLGRAIHGYGSKSNATT-NIIVTNALMDM 295
Query: 253 YAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRV 312
YAK G I SA +FE+ V+ K+ +WT++IS F + G G++AVE F M + G+ PN V
Sbjct: 296 YAKSGSIASAFSVFEE--VQMKDAFTWTTMISSFTVQGNGRKAVELFWDMLRSGILPNSV 353
Query: 313 TFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALG 372
TF+SVL+ACSH GL++EG FDKM E + P ++HYGC++D+LGR G LE+AE
Sbjct: 354 TFVSVLSACSHAGLIQEGRELFDKMREVYHIDPRLEHYGCMVDLLGRGGLLEEAEALIDH 413
Query: 373 IPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGD 432
+ E D+V+WR+LL AC HGN + E ++I++ E G G YVL++N+ A R+ +
Sbjct: 414 MDVE-PDIVIWRSLLSACLAHGNDRLAEIAGKEIIKREPGDDGVYVLLWNMYALSNRWKE 472
Query: 433 AERLRRVMDERNAFKVPGCSLV 454
A +R+ M R +K PGCS +
Sbjct: 473 ALDMRKQMLSRKIYKKPGCSWI 494
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 71/322 (22%), Positives = 141/322 (43%), Gaps = 38/322 (11%)
Query: 151 VKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITI 210
++G A LF+E+P +++S+T ++ + +++ +A+++F +A + P
Sbjct: 64 AEFGRPADAGRLFDEIPHPDIISFTSLMSLHLKLDHHWKAISVFSHAIASGH-RPDGFAA 122
Query: 211 LAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDIS 270
+ L A GD + ++HG + G + ++ V N L+D Y +CG A +F+ +
Sbjct: 123 VGALSASGGLGDQRIGSVVHGLIFRCGLDS-ELVVCNALVDMYCRCGKFEPARTVFDRML 181
Query: 271 VER-----------------------------KNLVSWTSIISGFAMHGMGKEAVENFGR 301
V+ K+ VSWT++I+G +A+E FG+
Sbjct: 182 VKDEVTWGSMLYGYMKCVGVDSALSFFYQMPMKSTVSWTALITGHVQDKQPIQALELFGK 241
Query: 302 MQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAG 361
M G +PN +T + VL+AC+ G ++ G + +I L+DM ++G
Sbjct: 242 MLLEGHRPNHITIVGVLSACADIGALDLG-RAIHGYGSKSNATTNIIVTNALMDMYAKSG 300
Query: 362 RLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMER-GYGGDYVLM 420
+ A + ++ D W T++ + + GN G + +M R G + V
Sbjct: 301 SIASAFSVFEEV--QMKDAFTWTTMISSFTVQGN---GRKAVELFWDMLRSGILPNSVTF 355
Query: 421 YNILAGVGRFGDAERLRRVMDE 442
++L+ G + R + D+
Sbjct: 356 VSVLSACSHAGLIQEGRELFDK 377
>gi|225450565|ref|XP_002281942.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48910
isoform 1 [Vitis vinifera]
Length = 672
Score = 276 bits (705), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 161/455 (35%), Positives = 244/455 (53%), Gaps = 49/455 (10%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNL 92
L+N ++ P KA LLY ++ + + +TY +++ C+
Sbjct: 104 LWNCMIKVCIENNEPFKAILLYYEMMVAHFRP--------NKYTYPAVLKACSDAGVVAE 155
Query: 93 GTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDE------------------ 134
G Q+HA + K G ++ ++ + MY S G L ++ ++ D+
Sbjct: 156 GVQVHAHLVKHGLGGDGHILSSAIRMYASFGRLVEARRILDDKGGEVDAVCWNAMIDGYL 215
Query: 135 --------------MPERNLV-TWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIID 179
MP+R+++ TWN MI+G + G +E AR F+EM R+ +SW+ +ID
Sbjct: 216 RFGEVEAARELFEGMPDRSMISTWNAMISGFSRCGMVEVAREFFDEMKERDEISWSAMID 275
Query: 180 GYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFT 239
GY + EAL +F +M E P + + +VL A G + + IH Y KR
Sbjct: 276 GYIQEGCFMEALEIFHQMQK-EKIRPRKFVLPSVLSACANLGALDQGRWIHTYA-KRNSI 333
Query: 240 AFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENF 299
D + L+D YAKCG I A ++FE +S K + SW ++I G AMHG ++A++ F
Sbjct: 334 QLDGVLGTSLVDMYAKCGRIDLAWEVFEKMS--NKEVSSWNAMIGGLAMHGRAEDAIDLF 391
Query: 300 GRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGR 359
+M + PN +TF+ VLNAC+HGGLV++GL F+ M +E V P I+HYGC++D+LGR
Sbjct: 392 SKMD---INPNEITFVGVLNACAHGGLVQKGLTIFNSMRKEYGVEPQIEHYGCIVDLLGR 448
Query: 360 AGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVL 419
AG L +AEK IP+E T VW LLGAC HGNVE+GERV + +LE+E G Y L
Sbjct: 449 AGLLTEAEKVVSSIPTEPTP-AVWGALLGACRKHGNVELGERVGKILLELEPQNSGRYTL 507
Query: 420 MYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
+ NI A GR+ + +R++M ER PG S++
Sbjct: 508 LSNIYAKAGRWEEVGEVRKLMKERGIKTTPGTSII 542
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 82/359 (22%), Positives = 162/359 (45%), Gaps = 52/359 (14%)
Query: 80 LIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGF-----LKDSSKLFDE 134
L+ T T S +L Q HA+I + G Y+ +LV Y ++ + S ++FD
Sbjct: 38 LLNTQCTTSLHHL-KQAHALILRTGHLQDSYIAGSLVKSYANVSTNRYLSFESSLRVFDF 96
Query: 135 MPERNLVTWNVMITGLVKWGELEFARSLFEEM------PCR-------NVVSWTGII--- 178
+ + N+ WN MI ++ E A L+ EM P + S G++
Sbjct: 97 VRKPNVFLWNCMIKVCIENNEPFKAILLYYEMMVAHFRPNKYTYPAVLKACSDAGVVAEG 156
Query: 179 --------------DGY-----TRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQ 219
DG+ RM S L R+++ + E + A++ +
Sbjct: 157 VQVHAHLVKHGLGGDGHILSSAIRMYASFGRLVEARRILDDKGGEVDAVCWNAMIDGYLR 216
Query: 220 NGDVKSC-QLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVS 278
G+V++ +L G ++ + + N +I +++CG + A + F+++ + ++ +S
Sbjct: 217 FGEVEAARELFEGMPDRSMISTW-----NAMISGFSRCGMVEVAREFFDEM--KERDEIS 269
Query: 279 WTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMV 338
W+++I G+ G EA+E F +MQK ++P + SVL+AC++ G +++G +
Sbjct: 270 WSAMIDGYIQEGCFMEALEIFHQMQKEKIRPRKFVLPSVLSACANLGALDQG-RWIHTYA 328
Query: 339 EECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVE 397
+ + D L+DM + GR++ A + + ++ +V W ++G + HG E
Sbjct: 329 KRNSIQLDGVLGTSLVDMYAKCGRIDLAWEVFEKMSNK--EVSSWNAMIGGLAMHGRAE 385
Score = 41.6 bits (96), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 71/174 (40%), Gaps = 11/174 (6%)
Query: 271 VERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEG 330
V + N+ W +I + +A+ + M +PN+ T+ +VL ACS G+V EG
Sbjct: 97 VRKPNVFLWNCMIKVCIENNEPFKAILLYYEMMVAHFRPNKYTYPAVLKACSDAGVVAEG 156
Query: 331 LNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGAC 390
+ +V+ + D I M GRL +A + E+ D V W ++
Sbjct: 157 VQVHAHLVKHG-LGGDGHILSSAIRMYASFGRLVEARRILDDKGGEV-DAVCWNAMIDGY 214
Query: 391 SFHGNVEMGERVTRKILE--MERGYGGDYVLMYNILAGVGRFGDAERLRRVMDE 442
G VE R++ E +R + M ++G R G E R DE
Sbjct: 215 LRFGEVE----AARELFEGMPDRSMISTWNAM---ISGFSRCGMVEVAREFFDE 261
>gi|357150678|ref|XP_003575540.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Brachypodium distachyon]
Length = 491
Score = 276 bits (705), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 149/363 (41%), Positives = 217/363 (59%), Gaps = 8/363 (2%)
Query: 95 QLHAVISKVGFQ---SHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLV 151
Q+H ++ K G S VY +T+L +Y G L D+ K+FD MPE +V+WNV++ G V
Sbjct: 86 QIHTLLVKSGLPRSVSGVYASTSLARVYARHGRLADARKVFDGMPETTVVSWNVLLDGFV 145
Query: 152 KWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITIL 211
+ G+L+ A LF EM RNVVSW ++ G+ R+ R+ EA+ LF +M P E T++
Sbjct: 146 RAGDLDAAWELFVEMTERNVVSWNTVMVGFARLGRAQEAVELFVEMTTVYGLVPDEATMV 205
Query: 212 AVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISV 271
+ A+ G + + HGY +R F+ D + LI+ Y +CG + +A F SV
Sbjct: 206 GFVSAVRNIGLLGLGRSAHGYVIRREFS-LDGALGVGLINMYTRCGSMTAAYLCFS--SV 262
Query: 272 ERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGL 331
KN+ WTS I GFA HG A+ F M+++G++PN VTF++VLNACSHGGLV+EG
Sbjct: 263 TSKNVEHWTSAIGGFAAHGHPDMALRLFAEMRELGIEPNDVTFVAVLNACSHGGLVDEGF 322
Query: 332 NFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACS 391
+F+ M+ + + P I+HYGCL+D+LGRAG LE+A A +P + V W +LL AC
Sbjct: 323 KYFN-MMRKMGIRPSIQHYGCLVDLLGRAGFLEEAFNLASSLPKD-PGFVTWSSLLAACQ 380
Query: 392 FHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGC 451
HGNV+M E +K+ + E +G YVL+ N A G++ D +R R M+ A K PG
Sbjct: 381 THGNVDMAEVAAQKLADAEPNHGSSYVLLSNAYARAGQWEDLKRTRSRMEAHRAVKKPGL 440
Query: 452 SLV 454
S +
Sbjct: 441 SWI 443
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 56/257 (21%), Positives = 94/257 (36%), Gaps = 41/257 (15%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+NT++ ++ Q+A L+ ++ +Y L P D T + + LG
Sbjct: 168 WNTVMVGFARLGRAQEAVELFVEMTTVYG-----LVP--DEATMVGFVSAVRNIGLLGLG 220
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
H + + F + L+NMY G + + F + +N+ W I G
Sbjct: 221 RSAHGYVIRREFSLDGALGVGLINMYTRCGSMTAAYLCFSSVTSKNVEHWTSAIGGFAAH 280
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
G + A LF EM R + GI EP+++T +AV
Sbjct: 281 GHPDMALRLFAEM--REL----GI--------------------------EPNDVTFVAV 308
Query: 214 LPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVER 273
L A G V K G I+ CL+D + G + A L + +
Sbjct: 309 LNACSHGGLVDEGFKYFNMMRKMGIRP-SIQHYGCLVDLLGRAGFLEEAFNLASSLPKD- 366
Query: 274 KNLVSWTSIISGFAMHG 290
V+W+S+++ HG
Sbjct: 367 PGFVTWSSLLAACQTHG 383
>gi|125557011|gb|EAZ02547.1| hypothetical protein OsI_24658 [Oryza sativa Indica Group]
Length = 635
Score = 275 bits (704), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 147/381 (38%), Positives = 218/381 (57%), Gaps = 7/381 (1%)
Query: 74 SFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFD 133
S T S + C L+ LG LHA K+ YV TAL+ MY G + LFD
Sbjct: 133 SHTLSSSLPACHGLA---LGRALHAYAFKLALAGDSYVATALLGMYARGGDADAARALFD 189
Query: 134 EMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALAL 193
EMP+ ++V M+T K G L+ AR LF+ MP ++ + W +IDGYT+ R NEAL L
Sbjct: 190 EMPDPHVVPVTAMLTCYAKMGALDDARELFDGMPSKDFICWNAMIDGYTQHGRPNEALRL 249
Query: 194 FRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTY 253
FR M+ +P E+ I+ L A+ Q G +S + +H Y + + RV LID Y
Sbjct: 250 FRWMLRSG-VDPDEVAIILALSAVAQLGTAESGRWLHSYVKNSRRVQLNARVGTALIDMY 308
Query: 254 AKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVT 313
KCG + A +F S+ K++V W ++I+G+AMHG ++A+E F +++ GL P +T
Sbjct: 309 CKCGSLEDAVSVFN--SIGDKDIVVWNAMINGYAMHGDSRKALEMFSQLRSQGLWPTDIT 366
Query: 314 FLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGI 373
F+ +LNACSH GLV+EG FF M EE ++P I+HYGC++D+LGRAG +E+A +
Sbjct: 367 FIGLLNACSHSGLVDEGHQFFQSMEEEYAIVPKIEHYGCMVDLLGRAGLIEEAFHLVQSM 426
Query: 374 PSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDA 433
+ D V+W +LL AC H N+ +G+++ ++ G Y+L+ NI A VG + +
Sbjct: 427 -TIAPDTVMWVSLLAACRLHKNMALGQQIADYLVAGGLANSGMYILLSNIYAAVGNWEEV 485
Query: 434 ERLRRVMDERNAFKVPGCSLV 454
R+R +M K PGCS +
Sbjct: 486 ARVRSMMKASGIQKEPGCSAI 506
>gi|115470299|ref|NP_001058748.1| Os07g0113500 [Oryza sativa Japonica Group]
gi|22831309|dbj|BAC16163.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|24414055|dbj|BAC22304.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113610284|dbj|BAF20662.1| Os07g0113500 [Oryza sativa Japonica Group]
gi|125598898|gb|EAZ38474.1| hypothetical protein OsJ_22862 [Oryza sativa Japonica Group]
Length = 634
Score = 275 bits (704), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 147/381 (38%), Positives = 218/381 (57%), Gaps = 7/381 (1%)
Query: 74 SFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFD 133
S T S + C L+ LG LHA K+ YV TAL+ MY G + LFD
Sbjct: 132 SHTLSSSLPACHGLA---LGRALHAYAFKLALAGDSYVATALLGMYARGGDADAARALFD 188
Query: 134 EMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALAL 193
EMP+ ++V M+T K G L+ AR LF+ MP ++ + W +IDGYT+ R NEAL L
Sbjct: 189 EMPDPHVVPVTAMLTCYAKMGALDDARELFDGMPSKDFICWNAMIDGYTQHGRPNEALRL 248
Query: 194 FRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTY 253
FR M+ +P E+ I+ L A+ Q G +S + +H Y + + RV LID Y
Sbjct: 249 FRWMLRSG-VDPDEVAIILALSAVAQLGTAESGRWLHSYVKNSRRVQLNARVGTALIDMY 307
Query: 254 AKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVT 313
KCG + A +F S+ K++V W ++I+G+AMHG ++A+E F +++ GL P +T
Sbjct: 308 CKCGSLEDAVSVFN--SIGDKDIVVWNAMINGYAMHGDSRKALEMFSQLRSQGLWPTDIT 365
Query: 314 FLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGI 373
F+ +LNACSH GLV+EG FF M EE ++P I+HYGC++D+LGRAG +E+A +
Sbjct: 366 FIGLLNACSHSGLVDEGHQFFQSMEEEYAIVPKIEHYGCMVDLLGRAGLIEEAFHLVQSM 425
Query: 374 PSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDA 433
+ D V+W +LL AC H N+ +G+++ ++ G Y+L+ NI A VG + +
Sbjct: 426 -TIAPDTVMWVSLLAACRLHKNMALGQQIADYLVAGGLANSGMYILLSNIYAAVGNWEEV 484
Query: 434 ERLRRVMDERNAFKVPGCSLV 454
R+R +M K PGCS +
Sbjct: 485 ARVRSMMKASGIQKEPGCSAI 505
>gi|168023826|ref|XP_001764438.1| predicted protein [Physcomitrella patens subsp. patens]
gi|54695178|dbj|BAD67154.1| PpPPR_91 [Physcomitrella patens]
gi|162684302|gb|EDQ70705.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 868
Score = 275 bits (704), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 148/414 (35%), Positives = 232/414 (56%), Gaps = 13/414 (3%)
Query: 41 YSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLGTQLHAVI 100
Y ES + F L +++++ P + T+ ++R C G Q+HA +
Sbjct: 339 YKDKESIDEVFQLLERMRR-----EGVFP---NKVTFMSILRACTAHGALEQGRQIHAEL 390
Query: 101 SKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFAR 160
SKVGF+ + TA+ NMY G + ++ ++F +M +N+V W ++ +K G+L A
Sbjct: 391 SKVGFELDRSLQTAIFNMYAKCGSIYEAEQVFSKMANKNVVAWTSFLSMYIKCGDLSSAE 450
Query: 161 SLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQN 220
+F EMP RNVVSW +I GY + + L M A E +P +T++ +L A
Sbjct: 451 KVFSEMPTRNVVSWNLMIAGYAQNGDIVKVFELLSSMKA-EGFQPDRVTVITILEACGAL 509
Query: 221 GDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWT 280
++ +L+H K G + D V LI Y+KCG + A +F+ +S ++ V+W
Sbjct: 510 AGLERGKLVHAEAVKLGLES-DTVVATSLIGMYSKCGQVAEARTVFDKMS--NRDTVAWN 566
Query: 281 SIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEE 340
++++G+ HG G EAV+ F RM K + PN +T +V++ACS GLV+EG F M E+
Sbjct: 567 AMLAGYGQHGDGLEAVDLFKRMLKERVSPNEITLTAVISACSRAGLVQEGREIFRMMQED 626
Query: 341 CEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGE 400
++ P +HYGC++D+LGRAGRL++AE+ +P E D+ VW LLGAC H NV++ E
Sbjct: 627 FKMTPRKQHYGCMVDLLGRAGRLQEAEEFIQSMPCE-PDISVWHALLGACKSHNNVQLAE 685
Query: 401 RVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
R ILE+E Y Y+ + NI A GR+ D+ ++RRVMD+R K G S +
Sbjct: 686 RAAHHILELEPSYASVYITLSNIYAQAGRWDDSTKVRRVMDDRGLKKDRGESSI 739
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 99/413 (23%), Positives = 200/413 (48%), Gaps = 61/413 (14%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+++++ Y+ P KAF ++++ + + + P + T+ +++ C S G
Sbjct: 125 WSSMIAAYAGNNHPAKAFDTFERM------TDANIEP--NRITFLSILKACNNYSILEKG 176
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
++H ++ +G ++ V V TAL+ MY G + + ++F +M ERN+V+W
Sbjct: 177 RKIHTIVKAMGMETDVAVATALITMYSKCGEISVACEVFHKMTERNVVSW---------- 226
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
T II + + NEA L+ +M+ + P+ +T +++
Sbjct: 227 ---------------------TAIIQANAQHRKLNEAFELYEQMLQAGIS-PNAVTFVSL 264
Query: 214 LPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVER 273
L + + + IH + +RG D+ V N LI Y KC + A ++F+ +S +
Sbjct: 265 LNSCNTPEALNRGRRIHSHISERGLET-DMIVANALITMYCKCNSVQEAREIFDRMS--K 321
Query: 274 KNLVSWTSIISGFAMHG-MGKEAVEN----FGRMQKVGLKPNRVTFLSVLNACSHGGLVE 328
++++SW+++I+G+A G KE+++ RM++ G+ PN+VTF+S+L AC+ G +E
Sbjct: 322 RDVISWSAMIAGYAQSGYKDKESIDEVFQLLERMRREGVFPNKVTFMSILRACTAHGALE 381
Query: 329 EGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLG 388
+G ++ + L D + +M + G + +AE+ + ++ +VV W + L
Sbjct: 382 QGRQIHAELSKVGFEL-DRSLQTAIFNMYAKCGSIYEAEQVFSKMANK--NVVAWTSFLS 438
Query: 389 ACSFHGNVEMGERV-----TRKILE---MERGYG--GDYVLMYNILAGVGRFG 431
G++ E+V TR ++ M GY GD V ++ +L+ + G
Sbjct: 439 MYIKCGDLSSAEKVFSEMPTRNVVSWNLMIAGYAQNGDIVKVFELLSSMKAEG 491
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 103/424 (24%), Positives = 179/424 (42%), Gaps = 97/424 (22%)
Query: 71 LFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSK 130
L +S TY +I CA G +H + ++G + +Y+ +L+N Y + + +
Sbjct: 53 LVNSNTYGCVIEHCAKARRFEDGKMVHKQLDELGVEIDIYLGNSLINFYSKFEDVASAEQ 112
Query: 131 LFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEA 190
+F M R++VTW+ MI Y N +A
Sbjct: 113 VFRRMTLRDVVTWSSMIA-------------------------------AYAGNNHPAKA 141
Query: 191 LALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLI 250
F +M EP+ IT L++L A ++ + IH + G D+ V LI
Sbjct: 142 FDTFERMTDAN-IEPNRITFLSILKACNNYSILEKGRKIHTIVKAMGMET-DVAVATALI 199
Query: 251 DTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPN 310
Y+KCG I A ++F ++ +N+VSWT+II A H EA E + +M + G+ PN
Sbjct: 200 TMYSKCGEISVACEVFHKMT--ERNVVSWTAIIQANAQHRKLNEAFELYEQMLQAGISPN 257
Query: 311 RVTFLSVLNAC----------------SHGGL-------------------VEEGLNFFD 335
VTF+S+LN+C S GL V+E FD
Sbjct: 258 AVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDMIVANALITMYCKCNSVQEAREIFD 317
Query: 336 KMVEECEVLPDIKHYGCLIDMLGRAGR------------LEQAEKTALGIPSEITDVVVW 383
+M + D+ + +I ++G LE+ + + P+++T +
Sbjct: 318 RMSKR-----DVISWSAMIAGYAQSGYKDKESIDEVFQLLERMRREGV-FPNKVT----F 367
Query: 384 RTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVL---MYNILAGVGRFGDAERLRRVM 440
++L AC+ HG +E G ++ ++ ++ G+ D L ++N+ A G +AE++ M
Sbjct: 368 MSILRACTAHGALEQGRQIHAELSKV--GFELDRSLQTAIFNMYAKCGSIYEAEQVFSKM 425
Query: 441 DERN 444
+N
Sbjct: 426 ANKN 429
>gi|115482212|ref|NP_001064699.1| Os10g0442700 [Oryza sativa Japonica Group]
gi|31432332|gb|AAP53975.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|113639308|dbj|BAF26613.1| Os10g0442700 [Oryza sativa Japonica Group]
gi|215694632|dbj|BAG89823.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215768315|dbj|BAH00544.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 493
Score = 275 bits (704), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 148/383 (38%), Positives = 235/383 (61%), Gaps = 8/383 (2%)
Query: 75 FTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSH-VYVNTALVNMYVSLGFLKDSSKLFD 133
T+ FL R A L+ P L +HA + G H ++V+ +LV+MY + + +LFD
Sbjct: 63 LTFPFLARAAARLATPRLARAVHAQPLRRGLLPHDLHVSNSLVHMYAACALPGLARRLFD 122
Query: 134 EMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALAL 193
E+P N V+WN ++ G K +L AR +F MP R+VVSW+ +IDG + EALA+
Sbjct: 123 EIPRPNHVSWNALLDGYAKCRDLPAARRVFARMPQRDVVSWSAMIDGCVKCGEHREALAV 182
Query: 194 FRKMVAC----EYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCL 249
F M A + +++T+++VL A GD+ + +H Y E+ GF +IR+ L
Sbjct: 183 FEMMEATAARHDGVRANDVTMVSVLGACAHLGDLVRGRKMHRYLEEHGFP-LNIRLATSL 241
Query: 250 IDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKP 309
+D YAKCG I A ++F+ + VE +++ W ++I G A+HGM +E+++ F +M+ G+ P
Sbjct: 242 VDMYAKCGAIVEALEVFQAVPVENTDVLIWNAVIGGLAVHGMSRESLQMFQKMEHAGVVP 301
Query: 310 NRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKT 369
+ +T+LS+L+AC HGGLV+E +FF + +E + P ++HY CL+D+LGRAGRLE+A
Sbjct: 302 DEITYLSLLSACVHGGLVDEAWSFF-RSLEAQGLRPHVEHYACLVDVLGRAGRLEEAYGV 360
Query: 370 ALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGR 429
+P + + V V LL AC HG VE+GE V R+++ ++ + G Y+ + NI A R
Sbjct: 361 VKSMPMKPS-VSVLGALLNACHLHGWVELGEAVGRQLVHLQPDHDGRYIGLSNIYAVARR 419
Query: 430 FGDAERLRRVMDERNAFKVPGCS 452
+ +A++ R+VM+ER KVPG S
Sbjct: 420 WQEAKKARKVMEERGVKKVPGFS 442
>gi|224099379|ref|XP_002311462.1| predicted protein [Populus trichocarpa]
gi|222851282|gb|EEE88829.1| predicted protein [Populus trichocarpa]
Length = 538
Score = 275 bits (704), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 154/487 (31%), Positives = 255/487 (52%), Gaps = 74/487 (15%)
Query: 30 HSQLFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSH 89
++ ++N + YS ES + +L++Q++ L + + FT+ ++++C ++
Sbjct: 15 NASIWNAMFRGYSQNESHKDVIVLFRQMKG--------LDVMPNCFTFPVILKSCVKINA 66
Query: 90 PNLGTQLHAVISKVGFQSHVYVNTALVNM------------------------------- 118
G ++H + K GF+++ +V T L++M
Sbjct: 67 LKEGEEVHCFVIKSGFRANPFVATTLIDMYASGGAIHAAYRVFGEMIERNVIAWTAMING 126
Query: 119 YVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVK---------------------W---- 153
Y++ L + +LFD PER++V WN MI+G ++ W
Sbjct: 127 YITCCDLVTARRLFDLAPERDIVLWNTMISGYIEAKDVIRARELFDKMPNKDVMSWNTVL 186
Query: 154 ------GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSE 207
G++ LFEEMP RNV SW +I GYTR +E L+ F++M+ P++
Sbjct: 187 NGYASNGDVMACERLFEEMPERNVFSWNALIGGYTRNGCFSEVLSAFKRMLVDGTVVPND 246
Query: 208 ITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFE 267
T++ VL A + G + + +H Y E G+ ++ V N L+D YAKCG + +A +F+
Sbjct: 247 ATLVNVLSACARLGALDLGKWVHVYAESHGYKG-NVYVRNALMDMYAKCGVVETALDVFK 305
Query: 268 DISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLV 327
S++ K+L+SW +II G A+HG G +A+ F M+ G P+ +TF+ +L AC+H GLV
Sbjct: 306 --SMDNKDLISWNTIIGGLAVHGHGADALNLFSHMKIAGENPDGITFIGILCACTHMGLV 363
Query: 328 EEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLL 387
E+G ++F M ++ ++P I+HYGC++D+LGRAG L A +P E D V+W LL
Sbjct: 364 EDGFSYFKSMTDDYSIVPRIEHYGCIVDLLGRAGLLAHAVDFIRKMPIE-ADAVIWAALL 422
Query: 388 GACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFK 447
GAC + NVE+ E K++E E +YV++ NI GR+ D RL+ M + K
Sbjct: 423 GACRVYKNVELAELALEKLIEFEPKNPANYVMLSNIYGDFGRWKDVARLKVAMRDTGFKK 482
Query: 448 VPGCSLV 454
+PGCSL+
Sbjct: 483 LPGCSLI 489
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 67/296 (22%), Positives = 130/296 (43%), Gaps = 22/296 (7%)
Query: 156 LEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLP 215
+E A +F+++P N W + GY++ + + LFR+M + P+ T +L
Sbjct: 1 MENAHKVFDQIPEPNASIWNAMFRGYSQNESHKDVIVLFRQMKGLDVM-PNCFTFPVILK 59
Query: 216 AIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKN 275
+ + +K + +H + K GF A + V LID YA G I +A ++F ++ +ER N
Sbjct: 60 SCVKINALKEGEEVHCFVIKSGFRA-NPFVATTLIDMYASGGAIHAAYRVFGEM-IER-N 116
Query: 276 LVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNR--VTFLSVLNACSHGGLVEEGLNF 333
+++WT++I+G+ + + L P R V + ++++ V
Sbjct: 117 VIAWTAMINGYIT------CCDLVTARRLFDLAPERDIVLWNTMISGYIEAKDVIRAREL 170
Query: 334 FDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFH 393
FDKM + D+ + +++ G + E+ +P +V W L+G + +
Sbjct: 171 FDKMPNK-----DVMSWNTVLNGYASNGDVMACERLFEEMPER--NVFSWNALIGGYTRN 223
Query: 394 GNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFG--DAERLRRVMDERNAFK 447
G +++L D L+ N+L+ R G D + V E + +K
Sbjct: 224 GCFSEVLSAFKRMLVDGTVVPNDATLV-NVLSACARLGALDLGKWVHVYAESHGYK 278
>gi|242047142|ref|XP_002461317.1| hypothetical protein SORBIDRAFT_02g000820 [Sorghum bicolor]
gi|241924694|gb|EER97838.1| hypothetical protein SORBIDRAFT_02g000820 [Sorghum bicolor]
Length = 640
Score = 275 bits (704), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 158/457 (34%), Positives = 247/457 (54%), Gaps = 37/457 (8%)
Query: 3 ILQNSQTPNNI--TTQIHSHLLTTNSLLHHSQLFNTLLHFYSLAESPQKAFLLYKQLQQI 60
+L+ + P + T+ IH+H ++ LHH+ L LL + L
Sbjct: 84 LLRRTPDPTAVFYTSAIHAH---SSRGLHHAALA-----------------LLSEMLL-- 121
Query: 61 YTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYV 120
SH LP + T S + C L+ +G LH K+ YV TAL+ MY
Sbjct: 122 ---SHGLLP---TAHTLSASLPACGGLA---VGRALHGYAVKLALSGEPYVATALLGMYA 172
Query: 121 SLGFLKDSSKLFDEM-PERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIID 179
G + LFD M P+ ++V+ M+T K G L+ ARSLF+ +P ++++ W ++D
Sbjct: 173 RAGDAAAARVLFDGMQPDPHVVSVTAMLTCYAKMGLLDDARSLFDGLPSKDLICWNAMMD 232
Query: 180 GYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGY--GEKRG 237
GYT+ R +EAL LFR+M+ EP E++++ L A+ Q G +S + +H +
Sbjct: 233 GYTQHGRPSEALRLFRRMLRSG-VEPDEVSVVLALSAVAQLGTAESGRWLHSFVTNSSSR 291
Query: 238 FTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVE 297
+ RV LID Y KCG + A +F D+ +++V+W ++++G+AMHG +EA+
Sbjct: 292 RVRLNARVGTALIDMYYKCGSLEDAVAVFGDLGAGDRDIVAWNAMVNGYAMHGHSREALA 351
Query: 298 NFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDML 357
FG+++ GL P +TF+ VLNACSH GLV+EG F M EE + P ++HYGC++D+L
Sbjct: 352 AFGQLRAQGLWPTDITFIGVLNACSHSGLVDEGRELFRSMAEEYGIEPKVEHYGCMVDLL 411
Query: 358 GRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDY 417
GRAGR+E+A + + D V+W +LL AC H N+E+G+R+ ++ G Y
Sbjct: 412 GRAGRVEEAFELVQSMTRTKPDAVMWASLLAACRLHKNMELGQRIADHLVANGLANSGTY 471
Query: 418 VLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
VL+ N+ A G + + R+R +M K PGCS V
Sbjct: 472 VLLSNMYAAAGNWREVGRVRAMMRASGIQKEPGCSAV 508
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 115/275 (41%), Gaps = 38/275 (13%)
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
G L+ A +L P V +T I ++ + ALAL +M+ P+ T+ A
Sbjct: 76 GRLDLAVALLRRTPDPTAVFYTSAIHAHSSRGLHHAALALLSEMLLSHGLLPTAHTLSAS 135
Query: 214 LPAIWQNGDVKSCQLIHGYGEKRGFTA------------------------FD------- 242
LPA G + + +HGY K + FD
Sbjct: 136 LPAC---GGLAVGRALHGYAVKLALSGEPYVATALLGMYARAGDAAAARVLFDGMQPDPH 192
Query: 243 IRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRM 302
+ + ++ YAK G + A LF+ + K+L+ W +++ G+ HG EA+ F RM
Sbjct: 193 VVSVTAMLTCYAKMGLLDDARSLFDGL--PSKDLICWNAMMDGYTQHGRPSEALRLFRRM 250
Query: 303 QKVGLKPNRVTFLSVLNACSHGGLVEEG--LNFFDKMVEECEVLPDIKHYGCLIDMLGRA 360
+ G++P+ V+ + L+A + G E G L+ F V + + LIDM +
Sbjct: 251 LRSGVEPDEVSVVLALSAVAQLGTAESGRWLHSFVTNSSSRRVRLNARVGTALIDMYYKC 310
Query: 361 GRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGN 395
G LE A + + D+V W ++ + HG+
Sbjct: 311 GSLEDAVAVFGDLGAGDRDIVAWNAMVNGYAMHGH 345
>gi|359490408|ref|XP_002267761.2| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Vitis vinifera]
Length = 650
Score = 275 bits (703), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 141/382 (36%), Positives = 230/382 (60%), Gaps = 5/382 (1%)
Query: 73 DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLF 132
D+ T +I C+ L + I + + VY+ L++MY + + +F
Sbjct: 216 DAVTMVKIILACSHLGDWEFADSMVKYIKENNLEIDVYLGNTLIDMYGRRSLAELAQGVF 275
Query: 133 DEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALA 192
D M ERN+V+WN ++ G K G L AR LF+ MP R+V+SWT +I GY++ ++ ++A+
Sbjct: 276 DRMRERNIVSWNALVMGHAKVGNLTAARKLFDNMPKRDVISWTSMITGYSQASQFSDAVK 335
Query: 193 LFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDT 252
LF++M+A + +P ++T+ +VL A G + +H Y + G A DI V N LID
Sbjct: 336 LFQEMMAAK-VKPDKVTVASVLSACAHLGKLDVGWAVHHYIRRHGVQA-DIYVGNSLIDM 393
Query: 253 YAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRV 312
Y KCG + A ++F ++ K+ VSWTS+ISG A++G A++ F +M + G++P
Sbjct: 394 YCKCGMVEKALEVFH--RMKDKDSVSWTSVISGLAVNGFANSALDLFSQMLREGVQPTHG 451
Query: 313 TFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALG 372
TF+ +L AC+H GLV +GL +F+ M ++P +KHYGC++D+L R+G +++A +
Sbjct: 452 TFVGILLACAHAGLVNKGLEYFESMESVHGLVPAMKHYGCVVDLLSRSGNIDKAYEFIKK 511
Query: 373 IPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGD 432
+P + DVVVWR LL AC HGNV + E T+++LE++ G+YVL+ N AGV R+ D
Sbjct: 512 MPI-VPDVVVWRILLSACKLHGNVVLAEIATKRLLELDPCDSGNYVLLSNTYAGVDRWDD 570
Query: 433 AERLRRVMDERNAFKVPGCSLV 454
A ++R +M++ + K G S +
Sbjct: 571 AMKMRELMEDSDVQKPSGSSSI 592
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 112/428 (26%), Positives = 206/428 (48%), Gaps = 64/428 (14%)
Query: 9 TPNNITT----QIHSHLLTTNSLLHHSQ-LFNTLLHFYSLAESP-QKAFLLYKQLQ---- 58
+ N+I+T ++H+HL+ T LH L + ++ YSL+ + KA L++ Q++
Sbjct: 24 SKNSISTDTSKELHAHLIRTQ--LHTDPFLMSDVIRSYSLSSTNLHKAHLVFNQIECPTL 81
Query: 59 QIYTH-------SHSPLPPLF------------DSFTYSFLIRTCATLSHPNLGTQLHAV 99
++ H S P+ + ++ T FL + CA +S G ++H
Sbjct: 82 VVWNHMIRGLSQSDHPVEAIHMYTRMHHQGITGNNLTLIFLFKACARVSDIVSGRKIHVH 141
Query: 100 ISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFA 159
K+GF+S+++V+ AL++MY G L + K+FD M +R+LV+WN +I G ++ + +
Sbjct: 142 ALKLGFESYLFVSNALIHMYAMCGQLGFAQKMFDGMLDRDLVSWNTLICGYSQYNKYKEV 201
Query: 160 RSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQ 219
LF+ M N+ + +A+ + + ++AC + E V
Sbjct: 202 LRLFDAMTAANIKA---------------DAVTMVKIILACSHLGDWEFADSMVKYIKEN 246
Query: 220 NGDVK---SCQLIHGYGEKR----GFTAFD------IRVLNCLIDTYAKCGCIFSASKLF 266
N ++ LI YG + FD I N L+ +AK G + +A KLF
Sbjct: 247 NLEIDVYLGNTLIDMYGRRSLAELAQGVFDRMRERNIVSWNALVMGHAKVGNLTAARKLF 306
Query: 267 EDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGL 326
+++ +++++SWTS+I+G++ +AV+ F M +KP++VT SVL+AC+H G
Sbjct: 307 DNM--PKRDVISWTSMITGYSQASQFSDAVKLFQEMMAAKVKPDKVTVASVLSACAHLGK 364
Query: 327 VEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTL 386
++ G + V DI LIDM + G +E+A + + + D V W ++
Sbjct: 365 LDVGWAVH-HYIRRHGVQADIYVGNSLIDMYCKCGMVEKALEVFHRMKDK--DSVSWTSV 421
Query: 387 LGACSFHG 394
+ + +G
Sbjct: 422 ISGLAVNG 429
>gi|224091072|ref|XP_002309169.1| predicted protein [Populus trichocarpa]
gi|222855145|gb|EEE92692.1| predicted protein [Populus trichocarpa]
Length = 619
Score = 275 bits (703), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 154/429 (35%), Positives = 251/429 (58%), Gaps = 20/429 (4%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNL 92
LFNT++H L +S Q++ +Y +++ L P DSFT+ FL++ CA L L
Sbjct: 75 LFNTMIHGLVLNDSFQESIEIYHSMRK------EGLSP--DSFTFPFLLKACARLLDSKL 126
Query: 93 GTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVK 152
G +LH ++ K G +S +VNT+LV++Y GF+ ++ K+FD++PE+N+ W +I+G +
Sbjct: 127 GIKLHGLVVKAGCESDAFVNTSLVSLYGKCGFIDNAFKVFDDIPEKNVAAWTAIISGYIG 186
Query: 153 WGELE-----FAR--SLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEP 205
G+ F R S+F+ M +++VSW+ +I GY EAL LF KM+ E P
Sbjct: 187 VGKCREAIDMFRRACSVFDGMLEKDIVSWSSMIQGYASNGLPKEALDLFFKMLN-EGFRP 245
Query: 206 SEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKL 265
++ VL A + G ++ ++ F + + LID YAKCG + SA ++
Sbjct: 246 DCYAMVGVLCACARLGALELGNWASNLMDRNEFLGNPV-LGTALIDMYAKCGRMDSAWEV 304
Query: 266 FEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGG 325
F + +K++V W + ISG AM G K A FG+M+K G++P+ TF+ +L AC+H G
Sbjct: 305 FR--GMRKKDIVVWNAAISGLAMSGHVKAAFGLFGQMEKSGIEPDGNTFVGLLCACTHAG 362
Query: 326 LVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRT 385
LV+EG +F+ M + P+I+HYGC++D+LGRAG L++A + +P E + +VW
Sbjct: 363 LVDEGRQYFNSMERVFTLTPEIEHYGCMVDLLGRAGFLDEAHQLVKSMPME-ANAIVWGA 421
Query: 386 LLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNA 445
LLG C H + ++ E V ++++ +E G+YVL+ NI + ++ DA ++R +M ER
Sbjct: 422 LLGGCRLHRDTQLVEGVLKQLIALEPSNSGNYVLLSNIYSASHKWEDAAKIRSIMSERGI 481
Query: 446 FKVPGCSLV 454
KVPG S +
Sbjct: 482 KKVPGYSWI 490
Score = 38.9 bits (89), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 56/114 (49%), Gaps = 5/114 (4%)
Query: 275 NLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFF 334
N+ + ++I G ++ +E++E + M+K GL P+ TF +L AC+ + G+
Sbjct: 72 NIFLFNTMIHGLVLNDSFQESIEIYHSMRKEGLSPDSFTFPFLLKACARLLDSKLGIKLH 131
Query: 335 DKMVEE-CEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLL 387
+V+ CE D L+ + G+ G ++ A K IP + +V W ++
Sbjct: 132 GLVVKAGCE--SDAFVNTSLVSLYGKCGFIDNAFKVFDDIPEK--NVAAWTAII 181
>gi|125525262|gb|EAY73376.1| hypothetical protein OsI_01257 [Oryza sativa Indica Group]
Length = 499
Score = 275 bits (703), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 144/359 (40%), Positives = 221/359 (61%), Gaps = 6/359 (1%)
Query: 95 QLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPE-RNLVTWNVMITGLVKW 153
QLH+++ + G + + + +LV Y S G + + ++FDE ++V+WNVMI G VK
Sbjct: 92 QLHSLLVRAGHAADPHASASLVQAYCSCGSVASARRVFDETAAYADVVSWNVMIDGYVKS 151
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
G+L AR LF+ MP RNVVSWT +I Y +M + EA+ +FR+M E EP + +L+V
Sbjct: 152 GDLARARELFDVMPGRNVVSWTMVIGAYAQMKQPEEAIEVFRRM-QVEGIEPDGVALLSV 210
Query: 214 LPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVER 273
L A G V + +H + +RG +I ++N +ID Y KCG + A ++FE +E+
Sbjct: 211 LSACGDLGVVDLGEWVHRFVLRRGLCQ-EIPLMNAIIDMYVKCGSVKKALEVFE--GMEQ 267
Query: 274 KNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNF 333
K++V+WT++I+GFA+HG+G EAVE F RM+K + PN +TFL+VL+ CSH GL + G +
Sbjct: 268 KSIVTWTTMIAGFALHGLGSEAVELFRRMEKENVSPNDITFLAVLSVCSHVGLTDLGRWY 327
Query: 334 FDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFH 393
F MV + ++ P ++HYGC+ID+LGRAG L +A +P + + +W LL A H
Sbjct: 328 FKTMVSQYKIKPRVEHYGCMIDLLGRAGCLMEARGLIQDMPFK-ANAAIWGALLAAARTH 386
Query: 394 GNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCS 452
G+ E+GE+ ++E+E G+Y+L+ NI A R+ LR M +R VPG S
Sbjct: 387 GDTELGEQALLHLIELEPHNSGNYILLSNIYAEQERWDAVRELRISMRDRGLRNVPGAS 445
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/264 (21%), Positives = 111/264 (42%), Gaps = 54/264 (20%)
Query: 41 YSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLGTQLHAVI 100
Y+ + P++A +++++Q + P D ++ C L +LG +H +
Sbjct: 179 YAQMKQPEEAIEVFRRMQV------EGIEP--DGVALLSVLSACGDLGVVDLGEWVHRFV 230
Query: 101 SKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFAR 160
+ G + + A+++MYV G +K + ++F+ M ++++VTW MI G G
Sbjct: 231 LRRGLCQEIPLMNAIIDMYVKCGSVKKALEVFEGMEQKSIVTWTTMIAGFALHG------ 284
Query: 161 SLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQN 220
+EA+ LFR+M E P++IT LAVL
Sbjct: 285 -------------------------LGSEAVELFRRMEK-ENVSPNDITFLAVLSVCSHV 318
Query: 221 GDVKSCQ-----LIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKN 275
G + ++ Y K + C+ID + GC+ A L +D+ + N
Sbjct: 319 GLTDLGRWYFKTMVSQYKIKPRVEHY-----GCMIDLLGRAGCLMEARGLIQDMPF-KAN 372
Query: 276 LVSWTSIISGFAMHG---MGKEAV 296
W ++++ HG +G++A+
Sbjct: 373 AAIWGALLAAARTHGDTELGEQAL 396
>gi|449451667|ref|XP_004143583.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
gi|449504924|ref|XP_004162332.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 595
Score = 275 bits (703), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 153/423 (36%), Positives = 246/423 (58%), Gaps = 13/423 (3%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNL 92
++N ++ YS ++ P+ AFL Y+Q+ S +P +S+T+ FL+R C L
Sbjct: 55 MWNAIIRAYSNSDEPELAFLSYQQMLS------SSVP--HNSYTFPFLLRACRNLLAMGE 106
Query: 93 GTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVK 152
Q+H ++ K+GF S V+ AL+++Y G + + +LFD +PER+ V+WN+MI G +K
Sbjct: 107 ALQVHGLVIKLGFGSDVFALNALLHVYALCGEIHCARQLFDNIPERDAVSWNIMIDGYIK 166
Query: 153 WGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILA 212
G+++ A +F +MP +NVVSWT +I G +S EAL+L +M + E + I +
Sbjct: 167 SGDVKTAYGVFLDMPLKNVVSWTSLISGLVEAGQSVEALSLCYEMQNAGF-ELDGVAIAS 225
Query: 213 VLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNC-LIDTYAKCGCIFSASKLFEDISV 271
+L A G + + +H Y G RV+ C L++ Y KCG + A +F +
Sbjct: 226 LLTACANLGALDQGRWLHFYVLNNGVDV--DRVIGCALVNMYVKCGDMEEALSVFGKLKG 283
Query: 272 ERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGL 331
+K++ WT++I GFA+HG G EA+E F RM++ G++PN +TF +VL ACS+GGLVEEG
Sbjct: 284 NQKDVYIWTAMIDGFAIHGRGVEALEWFNRMRREGIRPNSITFTAVLRACSYGGLVEEGK 343
Query: 332 NFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACS 391
F M V P I+HYGC++D+LGR+GRL++A++ +P + V+W LL AC
Sbjct: 344 ELFKSMKCFYNVNPSIEHYGCMVDLLGRSGRLDEAKELIKKMPMK-PSAVIWGALLKACW 402
Query: 392 FHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGC 451
H + +G +V ++E++ + G Y+ + ILA G++ +A +R M PG
Sbjct: 403 IHRDFLLGSQVGAHLVEVDSDHSGRYIQLATILAAEGKWKEAAEVRLKMKSLGVPISPGK 462
Query: 452 SLV 454
S V
Sbjct: 463 SSV 465
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 121/276 (43%), Gaps = 44/276 (15%)
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
G+L +A+ +F + N W II Y+ + A +++M++ S T +
Sbjct: 36 GDLLYAQRVFNGITSPNTFMWNAIIRAYSNSDEPELAFLSYQQMLSSSVPHNS-YTFPFL 94
Query: 214 LPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVER 273
L A + +HG K GF + D+ LN L+ YA CG I A +LF++I ER
Sbjct: 95 LRACRNLLAMGEALQVHGLVIKLGFGS-DVFALNALLHVYALCGEIHCARQLFDNIP-ER 152
Query: 274 ------------------------------KNLVSWTSIISGFAMHGMGKEAVENFGRMQ 303
KN+VSWTS+ISG G EA+ MQ
Sbjct: 153 DAVSWNIMIDGYIKSGDVKTAYGVFLDMPLKNVVSWTSLISGLVEAGQSVEALSLCYEMQ 212
Query: 304 KVGLKPNRVTFLSVLNACSHGGLVEEG--LNFF--DKMVEECEVLPDIKHYGC-LIDMLG 358
G + + V S+L AC++ G +++G L+F+ + V+ V+ GC L++M
Sbjct: 213 NAGFELDGVAIASLLTACANLGALDQGRWLHFYVLNNGVDVDRVI------GCALVNMYV 266
Query: 359 RAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHG 394
+ G +E+A + DV +W ++ + HG
Sbjct: 267 KCGDMEEALSVFGKLKGNQKDVYIWTAMIDGFAIHG 302
>gi|147777522|emb|CAN64813.1| hypothetical protein VITISV_024998 [Vitis vinifera]
Length = 513
Score = 275 bits (703), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 143/396 (36%), Positives = 226/396 (57%), Gaps = 5/396 (1%)
Query: 59 QIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNM 118
++ H H+ P D+F + +++CA PNLG +HA ++K S+ +V ALV+M
Sbjct: 32 SLFHHMHASSAPALDAFVFPLALKSCAAAHRPNLGAAIHAHVTKFSLVSNPFVACALVDM 91
Query: 119 YVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCR-NVVSWTGI 177
Y + + LFDE+P RN+V WN MI+ G + A LFE M N ++ I
Sbjct: 92 YGKCVSVSSARHLFDEIPHRNIVVWNAMISIYTHSGRVADALGLFEVMDVEPNASTFNAI 151
Query: 178 IDGYTRM-NRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKR 236
I G + + + S +AL+ +R+M + + IT+LA+LPA + + IHGY +
Sbjct: 152 ISGLSGLEDGSFKALSFYRRMGEVGLKQ-NLITLLALLPACVDLAALTLIKEIHGYAIRN 210
Query: 237 GFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAV 296
G + +CL++ Y +CGCI ++ +F+ IS+ +++V+W+S+IS +A+HG + A+
Sbjct: 211 GIDPHP-HLRSCLVEAYGRCGCIVNSQCVFQSISMSERDVVAWSSLISAYALHGDARTAL 269
Query: 297 ENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDM 356
E F +M+ ++P+ +TFL VL ACSH GL +E L +F +M ++ V HY C++D
Sbjct: 270 ETFEQMEMAKVQPDGITFLGVLKACSHAGLADEALGYFGRMCKDYGVEASSDHYSCVVDA 329
Query: 357 LGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGD 416
L RAGRL +A + G+P + T W LLGAC +G VE+ E R + E+E +
Sbjct: 330 LSRAGRLYEAYEIIQGMPVKAT-AKTWGALLGACRTYGEVELAEIAGRALFELEPDNAAN 388
Query: 417 YVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCS 452
YVL+ I A VGR +A+R+RR M+E PG S
Sbjct: 389 YVLLARIYASVGRHEEAQRMRREMNEMGVKAAPGSS 424
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 108/279 (38%), Gaps = 75/279 (26%)
Query: 171 VVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIH 230
++S+T ++ + R ++AL+LF M A + P+ + L +KSC H
Sbjct: 11 LLSYTKLLASHVNQGRHHDALSLFHHMHAS--SAPALDAFVFPLA-------LKSCAAAH 61
Query: 231 ----GYGEKRGFTAFDIR----VLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSI 282
G T F + V L+D Y KC + SA LF++I +N+V W ++
Sbjct: 62 RPNLGAAIHAHVTKFSLVSNPFVACALVDMYGKCVSVSSARHLFDEI--PHRNIVVWNAM 119
Query: 283 ISGFAMHGMGKEAVENFG---------------------------------RMQKVGLKP 309
IS + G +A+ F RM +VGLK
Sbjct: 120 ISIYTHSGRVADALGLFEVMDVEPNASTFNAIISGLSGLEDGSFKALSFYRRMGEVGLKQ 179
Query: 310 NRVTFLSVLNACS-----------HGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLG 358
N +T L++L AC HG + G++ P CL++ G
Sbjct: 180 NLITLLALLPACVDLAALTLIKEIHGYAIRNGID------------PHPHLRSCLVEAYG 227
Query: 359 RAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVE 397
R G + ++ I DVV W +L+ A + HG+
Sbjct: 228 RCGCIVNSQCVFQSISMSERDVVAWSSLISAYALHGDAR 266
>gi|225442904|ref|XP_002264123.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930 [Vitis vinifera]
Length = 724
Score = 275 bits (702), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 141/421 (33%), Positives = 247/421 (58%), Gaps = 13/421 (3%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+N ++ Y+ ++ ++ L+ +++++ LP S T ++ C+ L N+G
Sbjct: 188 WNVMISGYNRSKQFDESMKLFDEMERMRV-----LP---SSITLVSVLSACSKLKDLNVG 239
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
++H + + + + AL++MY + G + + +FD M R++++W ++TG
Sbjct: 240 KRVHRYVKDLKIEPVRVLENALIDMYAACGDMDTALGIFDNMKSRDVISWTAIVTGFTNL 299
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
G++ AR+ F++MP R+ VSWT +IDGY ++NR E L+LFR+M A +P E T++++
Sbjct: 300 GQVGLARNYFDKMPERDFVSWTAMIDGYLQVNRFKEVLSLFREMQAAN-IKPDEFTMVSI 358
Query: 214 LPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVER 273
L A G ++ + I Y +K D V N LID Y CG + A ++F ++
Sbjct: 359 LTACAHLGALELGEWIKAYIDKNEIK-IDSFVGNALIDMYFNCGNVEKAIRIFN--AMPH 415
Query: 274 KNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNF 333
++ +SWT++I G A++G G+EA++ F +M K + P+ VT + VL AC+H G+V++G F
Sbjct: 416 RDKISWTAVIFGLAINGYGEEALDMFSQMLKASITPDEVTCIGVLCACTHSGMVDKGKKF 475
Query: 334 FDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFH 393
F +M + + P++ HYGC++D+LGRAG L++A + +P + + +VW +LLGAC H
Sbjct: 476 FARMTTQHGIEPNVAHYGCMVDLLGRAGHLKEAHEVIKNMPVK-PNSIVWGSLLGACRVH 534
Query: 394 GNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSL 453
+ EM E ++ILE+E G YVL+ NI A R+ +R++M +R K PGCSL
Sbjct: 535 RDEEMAEMAAQQILELEPENGAVYVLLCNIYAACNRWEKLHEVRKLMMDRGIKKTPGCSL 594
Query: 454 V 454
+
Sbjct: 595 I 595
Score = 124 bits (311), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 99/392 (25%), Positives = 174/392 (44%), Gaps = 75/392 (19%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNL 92
++N ++ YS P A +Y ++ + +P D +TY FL++ +
Sbjct: 86 VWNNMIKGYSRVGCPNSAVSMYCEMLE-----RGVMP---DEYTYPFLLKRFTRDTAVKC 137
Query: 93 GTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVK 152
G +LH I K+GF S+V+V AL+++Y G + + +FD + ++VTWNVMI+G +
Sbjct: 138 GRELHDHIVKLGFSSNVFVQNALIHLYSLSGEVSVARGVFDRSSKGDVVTWNVMISGYNR 197
Query: 153 WGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILA 212
+ + + LF+EM V+ PS IT+++
Sbjct: 198 SKQFDESMKLFDEMERMRVL--------------------------------PSSITLVS 225
Query: 213 VLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVL-NCLIDTYAKCGCIFSASKLFEDI-- 269
VL A + D+ + +H Y + +RVL N LID YA CG + +A +F+++
Sbjct: 226 VLSACSKLKDLNVGKRVHRY--VKDLKIEPVRVLENALIDMYAACGDMDTALGIFDNMKS 283
Query: 270 ---------------------------SVERKNLVSWTSIISGFAMHGMGKEAVENFGRM 302
+ ++ VSWT++I G+ KE + F M
Sbjct: 284 RDVISWTAIVTGFTNLGQVGLARNYFDKMPERDFVSWTAMIDGYLQVNRFKEVLSLFREM 343
Query: 303 QKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGR 362
Q +KP+ T +S+L AC+H G +E G + +++ E+ D LIDM G
Sbjct: 344 QAANIKPDEFTMVSILTACAHLGALELG-EWIKAYIDKNEIKIDSFVGNALIDMYFNCGN 402
Query: 363 LEQAEKTALGIPSEITDVVVWRTLLGACSFHG 394
+E+A + +P D + W ++ + +G
Sbjct: 403 VEKAIRIFNAMPHR--DKISWTAVIFGLAING 432
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 83/300 (27%), Positives = 145/300 (48%), Gaps = 28/300 (9%)
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTE----PSEIT 209
G++E+AR +F+ MP N W +I GY+R+ N A++++ CE E P E T
Sbjct: 67 GDMEYARMVFDTMPGPNHFVWNNMIKGYSRVGCPNSAVSMY-----CEMLERGVMPDEYT 121
Query: 210 ILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDI 269
+L ++ VK + +H + K GF++ ++ V N LI Y+ G + A +F+
Sbjct: 122 YPFLLKRFTRDTAVKCGRELHDHIVKLGFSS-NVFVQNALIHLYSLSGEVSVARGVFDRS 180
Query: 270 SVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEE 329
S + ++V+W +ISG+ E+++ F M+++ + P+ +T +SVL+ACS +
Sbjct: 181 S--KGDVVTWNVMISGYNRSKQFDESMKLFDEMERMRVLPSSITLVSVLSACSKLKDLNV 238
Query: 330 GLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEIT--DVVVWRTLL 387
G + V++ ++ P LIDM G ++ TALGI + DV+ W ++
Sbjct: 239 GKRVH-RYVKDLKIEPVRVLENALIDMYAACGDMD----TALGIFDNMKSRDVISWTAIV 293
Query: 388 GACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAG---VGRFGDAERLRRVMDERN 444
+ G V + K+ E D+V ++ G V RF + L R M N
Sbjct: 294 TGFTNLGQVGLARNYFDKMPER------DFVSWTAMIDGYLQVNRFKEVLSLFREMQAAN 347
>gi|15217517|ref|NP_174603.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75168867|sp|Q9C501.1|PPR70_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g33350
gi|12322383|gb|AAG51215.1|AC051630_12 unknown protein; 15445-13829 [Arabidopsis thaliana]
gi|12322567|gb|AAG51281.1|AC027035_4 PPR-repeat protein, putative [Arabidopsis thaliana]
gi|332193465|gb|AEE31586.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 538
Score = 275 bits (702), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 141/389 (36%), Positives = 233/389 (59%), Gaps = 8/389 (2%)
Query: 70 PLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVS-LGFLKDS 128
P + F Y ++++ LS +H + K GF +V V TAL++ Y S + + +
Sbjct: 122 PRPNHFIYPLVLKSTPYLSSAFSTPLVHTHLFKSGFHLYVVVQTALLHSYASSVSHITLA 181
Query: 129 SKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSN 188
+LFDEM ERN+V+W M++G + G++ A +LFE+MP R+V SW I+ T+
Sbjct: 182 RQLFDEMSERNVVSWTAMLSGYARSGDISNAVALFEDMPERDVPSWNAILAACTQNGLFL 241
Query: 189 EALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNC 248
EA++LFR+M+ P+E+T++ VL A Q G ++ + IH + +R ++ D+ V N
Sbjct: 242 EAVSLFRRMINEPSIRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSS-DVFVSNS 300
Query: 249 LIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVG-- 306
L+D Y KCG + AS +F+ S +K+L +W S+I+ FA+HG +EA+ F M K+
Sbjct: 301 LVDLYGKCGNLEEASSVFKMAS--KKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNIN 358
Query: 307 -LKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQ 365
+KP+ +TF+ +LNAC+HGGLV +G +FD M + P I+HYGCLID+LGRAGR ++
Sbjct: 359 DIKPDHITFIGLLNACTHGGLVSKGRGYFDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDE 418
Query: 366 AEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILA 425
A + + + D +W +LL AC HG++++ E + ++ + GG +M N+
Sbjct: 419 ALEVMSTMKMK-ADEAIWGSLLNACKIHGHLDLAEVAVKNLVALNPNNGGYVAMMANLYG 477
Query: 426 GVGRFGDAERLRRVMDERNAFKVPGCSLV 454
+G + +A R R+++ +NA+K PG S +
Sbjct: 478 EMGNWEEARRARKMIKHQNAYKPPGWSRI 506
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 118/254 (46%), Gaps = 12/254 (4%)
Query: 156 LEFARSLFEEMPCRNVVSWTGIIDGYTRMN--RSNEALALFRKMVACEYTEPSEITILAV 213
L +AR +F+ N + ++ Y+ ++ A + FR MV P+ V
Sbjct: 73 LSYARFIFDRFSFPNTHLYAAVLTAYSSSLPLHASSAFSFFRLMVNRSVPRPNHFIYPLV 132
Query: 214 LPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYA-KCGCIFSASKLFEDISVE 272
L + S L+H + K GF + + V L+ +YA I A +LF+++S
Sbjct: 133 LKSTPYLSSAFSTPLVHTHLFKSGFHLY-VVVQTALLHSYASSVSHITLARQLFDEMS-- 189
Query: 273 RKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLN 332
+N+VSWT+++SG+A G AV F M + + ++ ++L AC+ GL E ++
Sbjct: 190 ERNVVSWTAMLSGYARSGDISNAVALFEDMPERDVP----SWNAILAACTQNGLFLEAVS 245
Query: 333 FFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKT-ALGIPSEI-TDVVVWRTLLGAC 390
F +M+ E + P+ C++ + G L+ A+ A ++ +DV V +L+
Sbjct: 246 LFRRMINEPSIRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLY 305
Query: 391 SFHGNVEMGERVTR 404
GN+E V +
Sbjct: 306 GKCGNLEEASSVFK 319
>gi|255574750|ref|XP_002528283.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532320|gb|EEF34121.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 602
Score = 275 bits (702), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 143/421 (33%), Positives = 241/421 (57%), Gaps = 12/421 (2%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+NT++ Y+ + A Y++L+++ ++ ++++ L+ C + L
Sbjct: 151 WNTMVIAYAKSGFCNDALRFYRELRRLGIG--------YNEYSFAGLLNICVKVKELELS 202
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
Q H + GF S++ +++++++ Y + D+ +LFDEM R+++ W M++G +W
Sbjct: 203 KQAHGQVLVAGFLSNLVISSSVLDAYAKCSEMGDARRLFDEMIIRDVLAWTTMVSGYAQW 262
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
G++E AR LF+ MP +N V+WT +I GY R + ++AL LF KM+A P + T +
Sbjct: 263 GDVEAARELFDLMPEKNPVAWTSLIAGYARHDLGHKALELFTKMMALN-IRPDQFTFSSC 321
Query: 214 LPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVER 273
L A + + IHGY + I V++ LID Y+KCGC+ +L D+ ++
Sbjct: 322 LCASASIASLNHGKQIHGYLIRTNIRPNTI-VVSSLIDMYSKCGCL-EVGRLVFDLMGDK 379
Query: 274 KNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNF 333
++V W +IIS A HG G+EA++ F M ++G+KP+R+T + +LNACSH GLV+EGL
Sbjct: 380 WDVVLWNTIISSLAQHGRGQEAIQMFDDMVRLGMKPDRITLIVLLNACSHSGLVQEGLRL 439
Query: 334 FDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFH 393
++ + V+P+ +HY CLID+LGRAG + +P + D +W LLG C H
Sbjct: 440 YESITSCHGVIPNQEHYACLIDLLGRAGHFDTLMNQLEKMPCKPND-EIWNALLGVCRMH 498
Query: 394 GNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSL 453
GN+E G V KI+E++ YVL+ +I A VGR+ E +R++M+ER+ K S
Sbjct: 499 GNIEFGREVAEKIIELDPQSSAAYVLLSSIHAAVGRWELVENVRQLMNERHVRKDRAISW 558
Query: 454 V 454
+
Sbjct: 559 I 559
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 101/374 (27%), Positives = 185/374 (49%), Gaps = 42/374 (11%)
Query: 74 SFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQ-SHVYVNTALVNMYVSLGFLKDSSKLF 132
S T ++L++ CA LG +H + G + + ++ L+NMY G + K+F
Sbjct: 50 SKTLAYLLQQCANTKSLKLGKWVHLHLKVTGLKRPNTFLANHLINMYSKCGDYPSAYKVF 109
Query: 133 DEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALA 192
DEM RNL +WN M++G K G+++ AR LF++MP ++VVSW ++ Y + N+AL
Sbjct: 110 DEMSTRNLYSWNGMLSGYAKLGKIKPARKLFDKMPEKDVVSWNTMVIAYAKSGFCNDALR 169
Query: 193 LFRKM--VACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLI 250
+R++ + Y E S +L + + +++ + HG GF + ++ + + ++
Sbjct: 170 FYRELRRLGIGYNEYSFAGLLNICVKV---KELELSKQAHGQVLVAGFLS-NLVISSSVL 225
Query: 251 DTYAKCGCIFSASKLFE---------------------DISVER--------KNLVSWTS 281
D YAKC + A +LF+ D+ R KN V+WTS
Sbjct: 226 DAYAKCSEMGDARRLFDEMIIRDVLAWTTMVSGYAQWGDVEAARELFDLMPEKNPVAWTS 285
Query: 282 IISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEEC 341
+I+G+A H +G +A+E F +M + ++P++ TF S L A + + G ++
Sbjct: 286 LIAGYARHDLGHKALELFTKMMALNIRPDQFTFSSCLCASASIASLNHGKQIHGYLI-RT 344
Query: 342 EVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGN----VE 397
+ P+ LIDM + G LE + + + DVV+W T++ + + HG ++
Sbjct: 345 NIRPNTIVVSSLIDMYSKCGCLEVG-RLVFDLMGDKWDVVLWNTIISSLAQHGRGQEAIQ 403
Query: 398 MGERVTRKILEMER 411
M + + R ++ +R
Sbjct: 404 MFDDMVRLGMKPDR 417
>gi|225456890|ref|XP_002277458.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070
[Vitis vinifera]
Length = 698
Score = 275 bits (702), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 165/494 (33%), Positives = 268/494 (54%), Gaps = 83/494 (16%)
Query: 31 SQLFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHP 90
S +N ++ ++L +SP +A LL+K++ H +S P D FT+ +++ C+ L
Sbjct: 89 SPAYNIMIRGFTLKQSPHEAILLFKEM-----HENSVQP---DEFTFPCILKVCSRLQAL 140
Query: 91 NLGTQLHAVISKVGFQSHVYVNTALVNM-------------------------------Y 119
+ G Q+HA+I K GF SH +V L++M Y
Sbjct: 141 SEGEQIHALIMKCGFGSHGFVKNTLIHMYANCGEVEVARRVFDEMSERNVRTWNSMFAGY 200
Query: 120 VSLGFLKDSSKLFDEM-----------------------------------PERNLVTWN 144
G ++ KLF EM E+ L
Sbjct: 201 TKSGNWEEVVKLFHEMLELDIRFDEVTLVSVLTACGRLADLELGEWINRYVEEKGLKGNP 260
Query: 145 VMITGLV----KWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVAC 200
+IT LV K G+++ AR LF++M R+VV+W+ +I GY++ +R EAL LF +M
Sbjct: 261 TLITSLVDMYAKCGQVDTARRLFDQMDRRDVVAWSAMISGYSQASRCREALDLFHEMQKA 320
Query: 201 EYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIF 260
+P+EIT++++L + G +++ + +H + +K+ + + L+D YAKCG +
Sbjct: 321 N-IDPNEITMVSILSSCAVLGALETGKWVHFFIKKKRMK-LTVTLGTALMDFYAKCGSVE 378
Query: 261 SASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNA 320
S+ ++F + V KN++SWT +I G A +G GK+A+E F M + ++PN VTF+ VL+A
Sbjct: 379 SSIEVFGKMPV--KNVLSWTVLIQGLASNGQGKKALEYFYLMLEKNVEPNDVTFIGVLSA 436
Query: 321 CSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDV 380
CSH GLV+EG + F M + + P I+HYGC++D+LGRAG +E+A + +P + +
Sbjct: 437 CSHAGLVDEGRDLFVSMSRDFGIEPRIEHYGCMVDILGRAGLIEEAFQFIKNMPIQ-PNA 495
Query: 381 VVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVM 440
V+WRTLL +C H NVE+GE ++++ +E + GDY+L+ NI A VGR+ DA ++R M
Sbjct: 496 VIWRTLLASCKVHKNVEIGEESLKQLIILEPTHSGDYILLSNIYASVGRWEDALKVRGEM 555
Query: 441 DERNAFKVPGCSLV 454
E+ K PGCSL+
Sbjct: 556 KEKGIKKTPGCSLI 569
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 119/236 (50%), Gaps = 7/236 (2%)
Query: 156 LEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLP 215
+++A S+F ++ + ++ +I G+T +EA+ LF++M +P E T +L
Sbjct: 74 MDYAVSIFRQIDEPDSPAYNIMIRGFTLKQSPHEAILLFKEMHE-NSVQPDEFTFPCILK 132
Query: 216 AIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKN 275
+ + + IH K GF + V N LI YA CG + A ++F+++S +N
Sbjct: 133 VCSRLQALSEGEQIHALIMKCGFGSHGF-VKNTLIHMYANCGEVEVARRVFDEMS--ERN 189
Query: 276 LVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFD 335
+ +W S+ +G+ G +E V+ F M ++ ++ + VT +SVL AC +E G + +
Sbjct: 190 VRTWNSMFAGYTKSGNWEEVVKLFHEMLELDIRFDEVTLVSVLTACGRLADLELG-EWIN 248
Query: 336 KMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACS 391
+ VEE + + L+DM + G+++ A + L + DVV W ++ S
Sbjct: 249 RYVEEKGLKGNPTLITSLVDMYAKCGQVDTARR--LFDQMDRRDVVAWSAMISGYS 302
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 38/176 (21%), Positives = 76/176 (43%), Gaps = 8/176 (4%)
Query: 271 VERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEG 330
++ + ++ +I GF + EA+ F M + ++P+ TF +L CS + EG
Sbjct: 84 IDEPDSPAYNIMIRGFTLKQSPHEAILLFKEMHENSVQPDEFTFPCILKVCSRLQALSEG 143
Query: 331 LNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGAC 390
++ +C LI M G +E A + + +V W ++
Sbjct: 144 EQIH-ALIMKCGFGSHGFVKNTLIHMYANCGEVEVARRVFDEMSER--NVRTWNSMFAGY 200
Query: 391 SFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGD---AERLRRVMDER 443
+ GN E ++ ++LE++ + D V + ++L GR D E + R ++E+
Sbjct: 201 TKSGNWEEVVKLFHEMLELDIRF--DEVTLVSVLTACGRLADLELGEWINRYVEEK 254
>gi|51535410|dbj|BAD37280.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|125596587|gb|EAZ36367.1| hypothetical protein OsJ_20695 [Oryza sativa Japonica Group]
gi|218197849|gb|EEC80276.1| hypothetical protein OsI_22264 [Oryza sativa Indica Group]
Length = 517
Score = 275 bits (702), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 161/451 (35%), Positives = 241/451 (53%), Gaps = 46/451 (10%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNL 92
+ N ++ Y+ A +P AF +Y+++ + S L P D+FT+ +L+R CA L
Sbjct: 66 MHNAMVRGYAHAGAPGDAFAVYRRMTEA-----SRLRP--DAFTFCYLLRACAGLPGSRA 118
Query: 93 GTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSS----------------------- 129
G Q+H + K+GF YV AL+NM+ G L+ +S
Sbjct: 119 GRQVHGAVVKLGFLKDAYVRNALINMFAKCGDLRVASVLLDEAGEGDVVAWSAVIAGHAA 178
Query: 130 --------KLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGY 181
K+FDE +++V WNVM+ K GE+E AR LF+ P ++VVSW II GY
Sbjct: 179 RGDMAAARKMFDECTHKDIVCWNVMLGAYAKHGEMENARELFDRAPEKDVVSWNTIITGY 238
Query: 182 TRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHG--YGEKRGFT 239
AL +F +M A +T P E TI+++L G + + ++IH + E+R +
Sbjct: 239 AAQGMLKHALEVFDEMRAAGWT-PDEATIVSLLSCCANTGLLDAGRMIHHQLHLERRPWI 297
Query: 240 AFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENF 299
+ I V N L+ YAKCG + +A + F +++ ++ +W S+I G A HG +++V F
Sbjct: 298 S--IVVGNALVSMYAKCGDLHTAVEGFN--TMKDTDVWTWNSVIGGLAFHGQAEQSVRFF 353
Query: 300 GRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGR 359
+M + + PN ++FL VL ACSH GLVE+G FF M + + P+ +HY C++DMLGR
Sbjct: 354 KKMLEKRIHPNEISFLCVLGACSHAGLVEDGQKFFYLMKDRYGIEPNARHYSCIVDMLGR 413
Query: 360 AGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVL 419
AG L++A + E + VVWRTLLGAC HGN+ +G+ V K+L M DYVL
Sbjct: 414 AGLLDEAYAIVSNMRCEPS-AVVWRTLLGACRTHGNMTLGKLVREKLLNMNEDASADYVL 472
Query: 420 MYNILAGVGRFGDAERLRRVMDERNAFKVPG 450
+ I A G + E RR MD R K G
Sbjct: 473 LSGIYASSGEWLGVETERRSMDRRGIRKAAG 503
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 129/315 (40%), Gaps = 63/315 (20%)
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
G + +AR +F+ +P ++ ++ GY +A A++R+M P T +
Sbjct: 47 GRMGYARKVFDGIPRPDLFMHNAMVRGYAHAGAPGDAFAVYRRMTEASRLRPDAFTFCYL 106
Query: 214 LPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFE------ 267
L A ++ + +HG K GF D V N LI+ +AKCG + AS L +
Sbjct: 107 LRACAGLPGSRAGRQVHGAVVKLGFLK-DAYVRNALINMFAKCGDLRVASVLLDEAGEGD 165
Query: 268 ---------------DISVERK-------------------------------------- 274
D++ RK
Sbjct: 166 VVAWSAVIAGHAARGDMAAARKMFDECTHKDIVCWNVMLGAYAKHGEMENARELFDRAPE 225
Query: 275 -NLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNF 333
++VSW +II+G+A GM K A+E F M+ G P+ T +S+L+ C++ GL++ G
Sbjct: 226 KDVVSWNTIITGYAAQGMLKHALEVFDEMRAAGWTPDEATIVSLLSCCANTGLLDAGRMI 285
Query: 334 FDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFH 393
++ E I L+ M + G L A + + TDV W +++G +FH
Sbjct: 286 HHQLHLERRPWISIVVGNALVSMYAKCGDLHTAVEGFNTMKD--TDVWTWNSVIGGLAFH 343
Query: 394 GNVEMGERVTRKILE 408
G E R +K+LE
Sbjct: 344 GQAEQSVRFFKKMLE 358
>gi|357498595|ref|XP_003619586.1| hypothetical protein MTR_6g059820 [Medicago truncatula]
gi|355494601|gb|AES75804.1| hypothetical protein MTR_6g059820 [Medicago truncatula]
Length = 528
Score = 275 bits (702), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 169/484 (34%), Positives = 265/484 (54%), Gaps = 56/484 (11%)
Query: 12 NITTQIHSHLLTTNSLLHHSQLFNTLLHFYSLAE----SPQKAFLLYKQLQQIYTHSHSP 67
N Q+ SHL T L HSQ HFY+ S + L Y QI+ H HSP
Sbjct: 20 NQLKQLQSHLTT----LGHSQT-----HFYAFKLIRFCSLNLSNLHYAH--QIFNHIHSP 68
Query: 68 LPPLFDSFTYSFLIRTCATLS----------HPN---------------LGTQLHAVISK 102
LF + +F + T PN L +HA I K
Sbjct: 69 NIYLFTAIITAFSSQQHTTFKLFKTMLNSNIRPNNFIYPHVLKSVKERFLVDLVHAQIVK 128
Query: 103 VGFQSHVYVNTALVNMYVS-LGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARS 161
GF ++ V T+LV+ Y LG L+D+ K+FDEM ERN+V + V+++G ++ G++E
Sbjct: 129 CGFLNYPVVETSLVDSYSKVLGGLRDAHKVFDEMSERNIVVFTVLVSGYLRVGDVEKGLM 188
Query: 162 LFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVA---------CEYTEPSEITILA 212
+F+EM R+V +W +I G T+ +E + LFR+MV C+ +P+++T++
Sbjct: 189 VFDEMVDRDVPAWNAVISGCTQNGFFSEGIRLFREMVFAAGLGEGGFCKGNKPNQVTVVC 248
Query: 213 VLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVE 272
VL A G ++ + IHGY + GF D V N L+D Y KCG + A K+FE +
Sbjct: 249 VLSACGHGGMLQLGKWIHGYVYRHGFVV-DSFVSNALVDMYGKCGSLELARKVFE--MDQ 305
Query: 273 RKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVG--LKPNRVTFLSVLNACSHGGLVEEG 330
RK L SW S+I+ +A+HG ++A+ F +M + G ++P+ VTF+ +LNAC+HGGLVE+G
Sbjct: 306 RKGLTSWNSMINCYALHGKCEDAITFFEKMVECGGGVRPDEVTFIGLLNACTHGGLVEQG 365
Query: 331 LNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGAC 390
+F+ M++E + P I HYGCLID+LGRAG+ ++A G+ E D VVW +LL C
Sbjct: 366 CGYFEMMIKEYGIEPQIAHYGCLIDLLGRAGQFDEAMDVVKGMSME-PDEVVWGSLLNGC 424
Query: 391 SFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPG 450
HG ++ E +K++E++ GG ++ NI +G++ + + + ++ ++K+PG
Sbjct: 425 KVHGRTDLAEFAAKKLVEIDPHNGGYGTMLANIYGQLGKWDEMRNVWSKLKQQKSYKIPG 484
Query: 451 CSLV 454
CS +
Sbjct: 485 CSWI 488
>gi|56783979|dbj|BAD81434.1| pentatricopeptide (PPR) repeat-containing protein -like [Oryza
sativa Japonica Group]
Length = 503
Score = 275 bits (702), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 144/359 (40%), Positives = 221/359 (61%), Gaps = 6/359 (1%)
Query: 95 QLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDE-MPERNLVTWNVMITGLVKW 153
QLH+++ + G + + + +LV Y S G + + ++FDE ++V+WNVMI G VK
Sbjct: 96 QLHSLLVRAGHAADPHASASLVQAYCSCGSVASARRVFDETAASADVVSWNVMIDGYVKS 155
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
G+L AR LF+ MP RNVVSWT +I Y +M + EA+ +FR+M E EP + +L+V
Sbjct: 156 GDLARARELFDVMPGRNVVSWTMVIGAYAQMKQPEEAIEVFRRM-QVEGIEPDGVALLSV 214
Query: 214 LPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVER 273
L A G V + +H + +RG +I ++N +ID Y KCG + A ++FE +E+
Sbjct: 215 LSACGDLGVVDLGEWVHRFVLRRGLCQ-EIPLMNAIIDMYVKCGSVKKALEVFE--GMEQ 271
Query: 274 KNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNF 333
K++V+WT++I+GFA+HG+G EAVE F RM+K + PN +TFL+VL+ CSH GL + G +
Sbjct: 272 KSIVTWTTMIAGFALHGLGLEAVELFRRMEKENVSPNDITFLAVLSVCSHVGLTDLGRWY 331
Query: 334 FDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFH 393
F MV + ++ P ++HYGC+ID+LGRAG L +A +P + + +W LL A H
Sbjct: 332 FKTMVSQYKIKPRVEHYGCMIDLLGRAGCLMEARGLIQDMPFK-ANAAIWGALLAAARTH 390
Query: 394 GNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCS 452
G+ E+GE+ ++E+E G+Y+L+ NI A R+ LR M +R VPG S
Sbjct: 391 GDTELGEQALLHLIELEPHNSGNYILLSNIYAEQERWDAVRELRISMRDRGLRNVPGAS 449
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 59/264 (22%), Positives = 112/264 (42%), Gaps = 54/264 (20%)
Query: 41 YSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLGTQLHAVI 100
Y+ + P++A +++++Q + P D ++ C L +LG +H +
Sbjct: 183 YAQMKQPEEAIEVFRRMQV------EGIEP--DGVALLSVLSACGDLGVVDLGEWVHRFV 234
Query: 101 SKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFAR 160
+ G + + A+++MYV G +K + ++F+ M ++++VTW MI G G
Sbjct: 235 LRRGLCQEIPLMNAIIDMYVKCGSVKKALEVFEGMEQKSIVTWTTMIAGFALHG------ 288
Query: 161 SLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQN 220
G+ EA+ LFR+M E P++IT LAVL
Sbjct: 289 --------------LGL-----------EAVELFRRMEK-ENVSPNDITFLAVLSVCSHV 322
Query: 221 GDVKSCQ-----LIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKN 275
G + ++ Y K + C+ID + GC+ A L +D+ + N
Sbjct: 323 GLTDLGRWYFKTMVSQYKIKPRVEHY-----GCMIDLLGRAGCLMEARGLIQDMPF-KAN 376
Query: 276 LVSWTSIISGFAMHG---MGKEAV 296
W ++++ HG +G++A+
Sbjct: 377 AAIWGALLAAARTHGDTELGEQAL 400
>gi|225432514|ref|XP_002277532.1| PREDICTED: pentatricopeptide repeat-containing protein At5g19020,
mitochondrial [Vitis vinifera]
Length = 694
Score = 274 bits (701), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 145/375 (38%), Positives = 220/375 (58%), Gaps = 3/375 (0%)
Query: 80 LIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERN 139
LI C + G Q H +I + GF + ++ +++ Y + G + + F+ + +
Sbjct: 322 LISACGRTMAVSEGQQFHGIIVRTGFDCYDFIQATIIHFYAACGEINLAFLQFELGSKDH 381
Query: 140 LVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVA 199
+ +WN +I+G V+ G +E AR LF+EMP R+V SW+ +I GY++ + + AL LF +MVA
Sbjct: 382 VSSWNALISGFVRNGMIEQARQLFDEMPERDVFSWSSMISGYSQNEQPDLALQLFHEMVA 441
Query: 200 CEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCI 259
+P+EIT+++V AI G + + H Y D + LID YAKCG I
Sbjct: 442 GG-VQPNEITMVSVFSAIATLGTLMEGRWAHEYILSNSIPLND-NLNAALIDMYAKCGSI 499
Query: 260 FSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLN 319
A +LF +I ++ W +II G AMHG +++ F ++Q+V +KPN +TF+ VL+
Sbjct: 500 TIALQLFYEIQDRVSSVSPWNAIICGLAMHGHANVSLKLFSQLQRVRIKPNSITFIGVLS 559
Query: 320 ACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITD 379
AC H GLV+ G +F M + P+IKHYGC+ID+LGRAGRL++A + +P + D
Sbjct: 560 ACCHAGLVDTGEKYFKGMKNLYNIEPNIKHYGCMIDLLGRAGRLKEAAEMIRKMPMK-AD 618
Query: 380 VVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRV 439
VV+W TLL AC HGNVE+GER + +++ +G VL+ NI A GR+ DA +RR
Sbjct: 619 VVIWGTLLAACRTHGNVEIGERAAENLAKLDISHGAGRVLLSNIYADAGRWDDAFLVRRA 678
Query: 440 MDERNAFKVPGCSLV 454
M + K PGCS V
Sbjct: 679 MQSQRMKKSPGCSGV 693
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 101/333 (30%), Positives = 166/333 (49%), Gaps = 34/333 (10%)
Query: 96 LHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGE 155
LHA+ K+G ++ V T LV+MY L ++ LFDE+PERN+VTWNVM+ G K G
Sbjct: 206 LHALSFKLGLEALNIVATNLVHMYCVCSSLGNARVLFDEIPERNVVTWNVMLNGYSKSGL 265
Query: 156 LEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLP 215
++ AR LFE +P ++VVSW IIDGY ++ R EAL ++R M+ P+E+ I+ ++
Sbjct: 266 VDLARDLFERIPAKDVVSWGTIIDGYVQIERLGEALRMYRSMLRTG-VGPNEVMIVDLIS 324
Query: 216 AIWQNGDVKSCQLIHGYGEKRGFTAFD------------------------------IRV 245
A + V Q HG + GF +D +
Sbjct: 325 ACGRTMAVSEGQQFHGIIVRTGFDCYDFIQATIIHFYAACGEINLAFLQFELGSKDHVSS 384
Query: 246 LNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKV 305
N LI + + G I A +LF+++ +++ SW+S+ISG++ + A++ F M
Sbjct: 385 WNALISGFVRNGMIEQARQLFDEM--PERDVFSWSSMISGYSQNEQPDLALQLFHEMVAG 442
Query: 306 GLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQ 365
G++PN +T +SV +A + G + EG + ++ L D LIDM + G +
Sbjct: 443 GVQPNEITMVSVFSAIATLGTLMEGRWAHEYILSNSIPLND-NLNAALIDMYAKCGSITI 501
Query: 366 AEKTALGIPSEITDVVVWRTLLGACSFHGNVEM 398
A + I ++ V W ++ + HG+ +
Sbjct: 502 ALQLFYEIQDRVSSVSPWNAIICGLAMHGHANV 534
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 84/289 (29%), Positives = 146/289 (50%), Gaps = 33/289 (11%)
Query: 81 IRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNL 140
+++C++L + G Q+H+++ K G S+++V +L++ YV + ++ LFD +
Sbjct: 59 LKSCSSLLALSQGQQIHSLVFKSGLLSNIFVKNSLISFYVKCRLISNARSLFDTCSVLDP 118
Query: 141 VTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVAC 200
V+ N+M+ G VK G L+ AR LFE+MP + VS+T ++ G + N EA+ +F+ M
Sbjct: 119 VSCNIMLAGYVKSGSLDNARHLFEKMPIKGCVSYTTMVMGLAQNNCWLEAIGVFKDMRFA 178
Query: 201 EYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDI----------------- 243
P+E+T+ +V+ A G + +C+++H K G A +I
Sbjct: 179 GVI-PNEVTLASVISAYSHVGGILNCRMLHALSFKLGLEALNIVATNLVHMYCVCSSLGN 237
Query: 244 -RVL------------NCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHG 290
RVL N +++ Y+K G + A LFE I K++VSW +II G+
Sbjct: 238 ARVLFDEIPERNVVTWNVMLNGYSKSGLVDLARDLFERIPA--KDVVSWGTIIDGYVQIE 295
Query: 291 MGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVE 339
EA+ + M + G+ PN V + +++AC V EG F +V
Sbjct: 296 RLGEALRMYRSMLRTGVGPNEVMIVDLISACGRTMAVSEGQQFHGIIVR 344
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 69/304 (22%), Positives = 125/304 (41%), Gaps = 46/304 (15%)
Query: 36 TLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPL-------------------PPLFDSFT 76
T++HFY+ AFL ++ + + S + L P D F+
Sbjct: 356 TIIHFYAACGEINLAFLQFELGSKDHVSSWNALISGFVRNGMIEQARQLFDEMPERDVFS 415
Query: 77 YSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMP 136
+S +I + P+L QL + G Q + ++ + +LG L + + E
Sbjct: 416 WSSMISGYSQNEQPDLALQLFHEMVAGGVQPNEITMVSVFSAIATLGTLME-GRWAHEYI 474
Query: 137 ERNLVTWN-----VMITGLVKWGELEFARSLFEEMPCR--NVVSWTGIIDGYTRMNRSNE 189
N + N +I K G + A LF E+ R +V W II G +N
Sbjct: 475 LSNSIPLNDNLNAALIDMYAKCGSITIALQLFYEIQDRVSSVSPWNAIICGLAMHGHANV 534
Query: 190 ALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEK--RGFTAF-----D 242
+L LF ++ +P+ IT + VL A G V + GEK +G +
Sbjct: 535 SLKLFSQLQRVR-IKPNSITFIGVLSACCHAGLVDT-------GEKYFKGMKNLYNIEPN 586
Query: 243 IRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHG---MGKEAVENF 299
I+ C+ID + G + A+++ + + + ++V W ++++ HG +G+ A EN
Sbjct: 587 IKHYGCMIDLLGRAGRLKEAAEMIRKMPM-KADVVIWGTLLAACRTHGNVEIGERAAENL 645
Query: 300 GRMQ 303
++
Sbjct: 646 AKLD 649
>gi|222622042|gb|EEE56174.1| hypothetical protein OsJ_05117 [Oryza sativa Japonica Group]
Length = 545
Score = 274 bits (701), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 153/382 (40%), Positives = 225/382 (58%), Gaps = 5/382 (1%)
Query: 73 DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLF 132
D F + L +G+ +H +I + G S + V ALV+MY G + + +F
Sbjct: 118 DGFAAVGALSASGGLGDQRIGSVVHGLIFRCGLDSELVVCNALVDMYCRCGKFEPARTVF 177
Query: 133 DEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALA 192
D M ++ VTW M+ G +K ++ A S F +MP ++ VSWT +I G+ + + +AL
Sbjct: 178 DRMLVKDEVTWGSMLYGYMKCVGVDSALSFFYQMPMKSTVSWTALITGHVQDKQPIQALE 237
Query: 193 LFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDT 252
LF KM+ E P+ ITI+ VL A G + + IHGYG K T +I V N L+D
Sbjct: 238 LFGKML-LEGHRPNHITIVGVLSACADIGALDLGRAIHGYGSKSNATT-NIIVTNALMDM 295
Query: 253 YAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRV 312
YAK G I SA +FE+ V+ K+ +WT++IS F + G G++AVE F M + G+ PN V
Sbjct: 296 YAKSGSIASAFSVFEE--VQMKDAFTWTTMISSFTVQGNGRKAVELFWDMLRSGILPNSV 353
Query: 313 TFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALG 372
TF+SVL+ACSH GL++EG FDKM E + P ++HYGC++D+LGR G LE+AE
Sbjct: 354 TFVSVLSACSHAGLIQEGRELFDKMREVYHIDPRLEHYGCMVDLLGRGGLLEEAEALIDH 413
Query: 373 IPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGD 432
+ E D+V+WR+LL AC HGN + E +I++ E G G YVL++N+ A R+ +
Sbjct: 414 MDVE-PDIVIWRSLLSACLAHGNDRLAEIAGMEIIKREPGDDGVYVLLWNMYALSNRWKE 472
Query: 433 AERLRRVMDERNAFKVPGCSLV 454
A +R+ M R +K PGCS +
Sbjct: 473 ALDMRKQMLSRKIYKKPGCSWI 494
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 71/322 (22%), Positives = 141/322 (43%), Gaps = 38/322 (11%)
Query: 151 VKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITI 210
++G A LF+E+P +++S+T ++ + +++ +A+++F +A + P
Sbjct: 64 AEFGRPADAGRLFDEIPHPDIISFTSLMSLHLKLDHHWKAISVFSHAIASGH-RPDGFAA 122
Query: 211 LAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDIS 270
+ L A GD + ++HG + G + ++ V N L+D Y +CG A +F+ +
Sbjct: 123 VGALSASGGLGDQRIGSVVHGLIFRCGLDS-ELVVCNALVDMYCRCGKFEPARTVFDRML 181
Query: 271 VER-----------------------------KNLVSWTSIISGFAMHGMGKEAVENFGR 301
V+ K+ VSWT++I+G +A+E FG+
Sbjct: 182 VKDEVTWGSMLYGYMKCVGVDSALSFFYQMPMKSTVSWTALITGHVQDKQPIQALELFGK 241
Query: 302 MQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAG 361
M G +PN +T + VL+AC+ G ++ G + +I L+DM ++G
Sbjct: 242 MLLEGHRPNHITIVGVLSACADIGALDLG-RAIHGYGSKSNATTNIIVTNALMDMYAKSG 300
Query: 362 RLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMER-GYGGDYVLM 420
+ A + ++ D W T++ + + GN G + +M R G + V
Sbjct: 301 SIASAFSVFEEV--QMKDAFTWTTMISSFTVQGN---GRKAVELFWDMLRSGILPNSVTF 355
Query: 421 YNILAGVGRFGDAERLRRVMDE 442
++L+ G + R + D+
Sbjct: 356 VSVLSACSHAGLIQEGRELFDK 377
>gi|359497788|ref|XP_002273247.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Vitis vinifera]
Length = 580
Score = 274 bits (701), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 148/386 (38%), Positives = 216/386 (55%), Gaps = 5/386 (1%)
Query: 71 LFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSK 130
LFD FT L+ +CA+L P L Q+H +G S++ + AL++ Y G S
Sbjct: 145 LFDEFTLVSLVGSCASLGAPELLRQVHGAAIIIGLNSNIIIGNALIDAYGKCGEPDISFS 204
Query: 131 LFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEA 190
+F MPER++V+W M+ + LE A LF +M +N VSWT +I G+ + R +EA
Sbjct: 205 IFSRMPERDVVSWTSMVAAYAQASRLEDAHWLFSQMQEKNTVSWTALIAGFAQNGRGDEA 264
Query: 191 LALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAF--DIRVLNC 248
L LF +M E PS T +VL A + + IHG+ + + +I +LN
Sbjct: 265 LHLFEQMRE-EGIPPSAFTFASVLSACADLALIARGKEIHGHIIRSTCIDYFCNIFILNA 323
Query: 249 LIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLK 308
LID Y KCG + SA+ LF+ + K++VSW S+I+GFA +G G+E++ F RM + ++
Sbjct: 324 LIDMYCKCGQMRSATTLFK--GMHEKDIVSWNSLITGFAQNGHGEESLAVFERMIEADIR 381
Query: 309 PNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEK 368
PN VTFL +L+AC H GLV EGL D M ++ V P HY +ID+LGR RLE+A
Sbjct: 382 PNHVTFLGLLSACCHTGLVSEGLRILDSMEKDYGVCPRSDHYAIMIDLLGRNNRLEEAMG 441
Query: 369 TALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVG 428
P V +W LLGAC HGN+++ R + ++E G YV++YNI A
Sbjct: 442 LIKRAPKGSDHVGMWGALLGACRIHGNMDLARRAAEVLFQLEPGNAARYVMVYNIYAAAS 501
Query: 429 RFGDAERLRRVMDERNAFKVPGCSLV 454
R+ +A ++RR+M ER K CS +
Sbjct: 502 RWDEARQVRRLMMERGLRKEAACSWI 527
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 102/367 (27%), Positives = 175/367 (47%), Gaps = 37/367 (10%)
Query: 77 YSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMP 136
YS LI C T H LG LH+ K ++ L++ Y ++ + K+F +P
Sbjct: 17 YSSLISKCITTRHLKLGKLLHSHFIKTALIFTTFLANRLIDFYSKCDSIQSAHKVFHVLP 76
Query: 137 ERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRK 196
+N +WN++I+ + G A +L ++MP N+VS+ +I G E+L +F+
Sbjct: 77 VKNTHSWNIIISAYSRSGLFNEAHNLLDQMPKPNLVSYNSLISGLGHHGFRKESLNVFKT 136
Query: 197 MVA-CEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAK 255
M+ C E T+++++ + G + + +HG G + +I + N LID Y K
Sbjct: 137 MLKQCSNVLFDEFTLVSLVGSCASLGAPELLRQVHGAAIIIGLNS-NIIIGNALIDAYGK 195
Query: 256 CG------CIFS-------------------ASKLFEDI-----SVERKNLVSWTSIISG 285
CG IFS AS+L ED ++ KN VSWT++I+G
Sbjct: 196 CGEPDISFSIFSRMPERDVVSWTSMVAAYAQASRL-EDAHWLFSQMQEKNTVSWTALIAG 254
Query: 286 FAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEEC--EV 343
FA +G G EA+ F +M++ G+ P+ TF SVL+AC+ L+ G ++ +
Sbjct: 255 FAQNGRGDEALHLFEQMREEGIPPSAFTFASVLSACADLALIARGKEIHGHIIRSTCIDY 314
Query: 344 LPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVT 403
+I LIDM + G++ A G+ + D+V W +L+ + +G+ E V
Sbjct: 315 FCNIFILNALIDMYCKCGQMRSATTLFKGMHEK--DIVSWNSLITGFAQNGHGEESLAVF 372
Query: 404 RKILEME 410
+++E +
Sbjct: 373 ERMIEAD 379
>gi|225423493|ref|XP_002274352.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 536
Score = 274 bits (701), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 154/437 (35%), Positives = 244/437 (55%), Gaps = 15/437 (3%)
Query: 26 SLLHHSQLFNTLLH-FYSLAESPQKAFLLYKQLQ---QIYTHS-HSPLPPLFDSFTYSFL 80
SL H +LF + H + + KAF+L +L QIY+ + L P D++T ++
Sbjct: 54 SLPHAWKLFQQIQHPTICICNTMIKAFVLKGKLINTIQIYSQMLENGLYP--DNYTLPYV 111
Query: 81 IRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNL 140
++ CA L +LG H K+GF ++V L+ MY S G ++ + +FDEMP
Sbjct: 112 LKACAGLQSCHLGESAHGQSVKLGFWFDIFVGNTLIAMYSSFGNVRAARCIFDEMPWHTA 171
Query: 141 VTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVAC 200
V+W VMI+G K G++E AR LF+E P ++ W II GY + N E L +FR M +
Sbjct: 172 VSWTVMISGYAKVGDVETARMLFDEAPMKDRGIWGSIISGYVQNNCFKEGLQMFRLMQST 231
Query: 201 EYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIF 260
EP E ++++L A G ++ +H Y ++ G +R+ LID YAKCG +
Sbjct: 232 GL-EPDEAILVSILCACAHLGAMEIGVWVHRYLDQLGHP-LSVRLSTGLIDMYAKCGSLD 289
Query: 261 SASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNA 320
A KLF+ +S +++ + W ++ISG AM+G G A+ F M+K G+KP+ +TF+++ A
Sbjct: 290 IAKKLFDGMS--QRDTICWNAMISGMAMNGDGDNALRLFSEMEKAGVKPDDITFIAIFTA 347
Query: 321 CSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIP---SEI 377
CS+ G+ E + + M + P +HYGC++D+LGRAG L++A++ L +P S
Sbjct: 348 CSYSGMAHEAIRLLNSMCTVYNMEPKSEHYGCIVDLLGRAGLLKEAKELILKMPNSSSPT 407
Query: 378 TDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLR 437
+ WR LL AC HG E+ E +++ +E + G YVL+ N+ A G+ R+R
Sbjct: 408 EQAIAWRALLSACCSHGQTEVAEDAAQRLFHLEH-HSGAYVLLSNLYAAAGKQDHVRRIR 466
Query: 438 RVMDERNAFKVPGCSLV 454
++M+ R K PGCS V
Sbjct: 467 KMMENRGVDKAPGCSSV 483
>gi|224124638|ref|XP_002330073.1| predicted protein [Populus trichocarpa]
gi|222871498|gb|EEF08629.1| predicted protein [Populus trichocarpa]
Length = 793
Score = 274 bits (701), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 148/421 (35%), Positives = 247/421 (58%), Gaps = 13/421 (3%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
++ L+ Y E ++A +L+K++ + + D ++ C+ L G
Sbjct: 257 WSALISCYEQNEMYEEALILFKEM--------NANGIMVDEVVVLSVLSACSRLLVVITG 308
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
+H ++ KVG +++V + AL++MY S + + KLF E + ++WN MI+G VK
Sbjct: 309 KLVHGLVVKVGIETYVNLQNALIHMYSSCEEVVTAQKLFSESCCLDQISWNSMISGYVKC 368
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
GE+E AR+LF+ MP ++ VSW+ +I GY + +R E L LF++M E T+P E +++V
Sbjct: 369 GEIEKARALFDSMPDKDNVSWSAMISGYAQQDRFTETLVLFQEM-QIEGTKPDETILVSV 427
Query: 214 LPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVER 273
+ A + + IH Y K G +I + LI+ Y K GC+ A ++F+ +E
Sbjct: 428 ISACTHLAALDQGKWIHAYIRKNGLK-INIILGTTLINMYMKLGCVEDALEVFK--GLEE 484
Query: 274 KNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNF 333
K + +W ++I G AM+G+ ++++ F M++ G+ PN +TF++VL AC H GLV+EG
Sbjct: 485 KGVSTWNALILGLAMNGLVDKSLKTFSEMKEHGVTPNEITFVAVLGACRHMGLVDEGHRH 544
Query: 334 FDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFH 393
F+ M++E ++ P+IKHYGC++D+LGRAG L++AE+ +P DV W LLGAC +
Sbjct: 545 FNSMIQEHKIGPNIKHYGCMVDLLGRAGMLKEAEELIESMPMA-PDVSTWGALLGACKKY 603
Query: 394 GNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSL 453
G+ E GER+ RK++E+ + G VL+ NI A G + D +R +M + K PGCS+
Sbjct: 604 GDNETGERIGRKLVELHPDHDGFNVLLSNIYASKGNWVDVLEVRGMMRQHGVVKTPGCSM 663
Query: 454 V 454
+
Sbjct: 664 I 664
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 145/528 (27%), Positives = 225/528 (42%), Gaps = 119/528 (22%)
Query: 12 NITTQIHSHLLTTNSLLHHSQLFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPL 71
N + QI SH+ N + NT++ Y SP KA +YK + + +
Sbjct: 77 NQSYQIFSHIENPNGFI-----CNTMMKGYMQRNSPCKAIWVYKFMLESNVAA------- 124
Query: 72 FDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKL 131
D++TY L ++C+ G + + KVGF S VY+ L+NMY G L D+ K+
Sbjct: 125 -DNYTYPILFQSCSIRLAEFDGKCIQDHVLKVGFDSDVYIQNTLINMYAVCGNLSDARKV 183
Query: 132 FD-------------------------------EMPERNLVTWNVMITGLVKWGELEFAR 160
FD MPERN++ N MI K G +E A
Sbjct: 184 FDGSSVLDMVSWNSMLAGYVLVGNVEEAKDVYDRMPERNVIASNSMIVLFGKKGNVEEAC 243
Query: 161 SLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQN 220
LF EM +++VSW+ +I Y + EAL LF++M A E+ +L+VL A +
Sbjct: 244 KLFNEMKQKDLVSWSALISCYEQNEMYEEALILFKEMNA-NGIMVDEVVVLSVLSACSRL 302
Query: 221 GDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDI----------- 269
V + +L+HG K G + + + N LI Y+ C + +A KLF +
Sbjct: 303 LVVITGKLVHGLVVKVGIETY-VNLQNALIHMYSSCEEVVTAQKLFSESCCLDQISWNSM 361
Query: 270 ------------------SVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNR 311
S+ K+ VSW+++ISG+A E + F MQ G KP+
Sbjct: 362 ISGYVKCGEIEKARALFDSMPDKDNVSWSAMISGYAQQDRFTETLVLFQEMQIEGTKPDE 421
Query: 312 VTFLSVLNACSHGGLVEEG----------------------LNFFDKM--VEEC-EVLPD 346
+SV++AC+H +++G +N + K+ VE+ EV
Sbjct: 422 TILVSVISACTHLAALDQGKWIHAYIRKNGLKINIILGTTLINMYMKLGCVEDALEVFKG 481
Query: 347 IKHYG-----CLIDMLGRAGRLEQAEKTALGI------PSEITDVVVWRTLLGACSFHGN 395
++ G LI L G ++++ KT + P+EIT V V LGAC G
Sbjct: 482 LEEKGVSTWNALILGLAMNGLVDKSLKTFSEMKEHGVTPNEITFVAV----LGACRHMGL 537
Query: 396 VEMGERVTRKILEMERGYGGD---YVLMYNILAGVGRFGDAERLRRVM 440
V+ G R +++ E G + Y M ++L G +AE L M
Sbjct: 538 VDEGHRHFNSMIQ-EHKIGPNIKHYGCMVDLLGRAGMLKEAEELIESM 584
>gi|359491264|ref|XP_002280276.2| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 684
Score = 274 bits (700), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 150/424 (35%), Positives = 242/424 (57%), Gaps = 9/424 (2%)
Query: 32 QLFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPN 91
+L+N ++ YS + Q+ L+ ++ + P+ + D +T++F+I +C+
Sbjct: 140 KLWNVMIRTYSKIRNSQEPIHLFLRMLTL----DGPMQVVPDEYTFTFVITSCSHQISLI 195
Query: 92 LGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLV 151
G +H ++ K GF+S++YV +++NM ++D+ K+F++M ER++ +W ++ G
Sbjct: 196 YGEIVHGMVVKSGFESNLYVGNSVINMCSVFARMEDARKVFNQMSERDVFSWTSLLGGYA 255
Query: 152 KWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITIL 211
K GE++ A LF MP RN VSW +I G+ R EAL F M+ + P+E ++
Sbjct: 256 KHGEMDRACELFNMMPVRNDVSWAVMISGFLGCGRYPEALTFFCNMLCDDRVNPNEAVLV 315
Query: 212 AVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISV 271
VL A G + IH Y +K G + LID YAKCG I AS++F I
Sbjct: 316 CVLSACAHLGALDQGNWIHLYIDKIGIRQSS-NISTALIDMYAKCGRIDCASRVFNGIC- 373
Query: 272 ERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGL 331
+++++S+TS+ISG + HG+GK+A+ F +M + PN +T L VLN CSH GLVEEG
Sbjct: 374 -KRDVLSFTSMISGLSYHGLGKDALRVFYQMLDENVMPNEITILGVLNGCSHSGLVEEGS 432
Query: 332 NFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACS 391
+ M + P I+HYGC ID+LGRAG LE+A + +P E D+V+WR LL A
Sbjct: 433 SILANMESLWGIAPKIEHYGCYIDLLGRAGYLERALEVVKTMPME-PDIVIWRALLSASR 491
Query: 392 FHGNVEMGERVTRKILEMERG-YGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPG 450
H NV +GE++ I +++ + G VL+ N+ A +GR+ +R++M +R + PG
Sbjct: 492 IHHNVNLGEQIISHIGQLKSSDHNGGEVLLSNLYASLGRWERVTEMRKLMVDRRSESSPG 551
Query: 451 CSLV 454
CS +
Sbjct: 552 CSWI 555
>gi|125537150|gb|EAY83638.1| hypothetical protein OsI_38867 [Oryza sativa Indica Group]
Length = 914
Score = 274 bits (700), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 154/464 (33%), Positives = 241/464 (51%), Gaps = 58/464 (12%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNL 92
L NT+L Y+L +P+ A + + P DSFTYSFLI+ + +
Sbjct: 419 LANTMLRAYALGGAPRDALAAFSAM------------PRRDSFTYSFLIKALSAAGVAPV 466
Query: 93 GTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVK 152
+H+ + K+G +V AL++ Y G D+ K+FDEMPER++V+WN + +V+
Sbjct: 467 -RAVHSHVVKLGSVEDTFVGNALIDAYSKNGGFSDARKVFDEMPERDVVSWNTAMAAMVR 525
Query: 153 WGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKM----------VACEY 202
GEL AR LF+EMP ++ VSW I+DGYT+ A LF++M + Y
Sbjct: 526 EGELAGARKLFDEMPEKDTVSWNTILDGYTKAGEVEAAFELFQRMPERNVVSWSTMVSGY 585
Query: 203 TEPSEI--------------------------------TILAVLPAIWQNGDVKSCQLIH 230
+ ++ ++++L A ++G + + IH
Sbjct: 586 CKKGDLEMARVIFDKMPGKNLVTWTIMMKEASVELDVAAVVSILAACAESGSLSLGKRIH 645
Query: 231 GYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHG 290
Y KR V N LID + KCGC+ A +F+ +V+ K+ VSW SII GFAMHG
Sbjct: 646 RYVRKRNL-GRSTHVCNALIDMFCKCGCVNRADYVFDTETVQ-KDSVSWNSIIGGFAMHG 703
Query: 291 MGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHY 350
G +A+E F +M++ G P+ VT ++VL+AC+H G V+EG +F M + ++P I+HY
Sbjct: 704 HGDKALELFAQMKQQGFNPDAVTMINVLSACTHMGFVDEGRRYFSNMERDYGIMPQIEHY 763
Query: 351 GCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEME 410
GC+ID+LGR G +++A +P E + V+W +LL AC H NVE E ++ +++
Sbjct: 764 GCMIDLLGRGGLIKEAVDLIKSMPWEPNE-VIWGSLLSACRLHKNVEYAEIAVNELSKLQ 822
Query: 411 RGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
G+Y ++ NI A G++ D + R M + K G S V
Sbjct: 823 PSNAGNYAVLSNIYAEAGQWSDMAKARMQMKGTGSQKTAGSSWV 866
>gi|222640201|gb|EEE68333.1| hypothetical protein OsJ_26615 [Oryza sativa Japonica Group]
Length = 983
Score = 274 bits (700), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 154/442 (34%), Positives = 240/442 (54%), Gaps = 18/442 (4%)
Query: 18 HSHLLTTNSLLHHSQLFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTY 77
+ L+T+ L + L N L+ + + P A LY L + H P P S
Sbjct: 158 QAALVTSGWLRRSADLHNALIRALAGSARPHLALPLYAHLLRA---GHHPTPHTLPSLLK 214
Query: 78 SFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVS-LGFLKDSSKLFDEMP 136
S + + A L +HA K+G + V+ AL+ ++ LG L D+ L
Sbjct: 215 SLAL-SPAVPGARGLALAVHAHAVKLGLAGFLLVSNALIRVHAGILGRLSDALVLLRTAA 273
Query: 137 ERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRK 196
+ T+N +IT + G + AR+LF+EMP RN VSW+ +++GY + EAL LF +
Sbjct: 274 SVDASTFNTLITAYARAGRVTDARALFDEMPARNAVSWSAMVNGYVQAGDGREALGLFAR 333
Query: 197 MVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVL----NCLIDT 252
M A + P + ++ VL A Q G ++ + +HGY A +IR+ L+D
Sbjct: 334 MQA-DGVRPDDTVLVGVLAACAQLGVLEQGKWVHGY-----LKANNIRITVFLGTALVDM 387
Query: 253 YAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRV 312
YAKCG + A ++F+ ++ KN+++WT++I G AMHG G EA+E F +M+++G+KP+ +
Sbjct: 388 YAKCGEMQLAMEVFK--VMKEKNVLAWTTMIKGLAMHGRGSEALELFSQMERLGVKPDDI 445
Query: 313 TFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALG 372
F+ L AC+H GLV++G FD MV + + P I+HYGC++D+L R G L +A +
Sbjct: 446 AFIGALCACTHTGLVDKGRELFDSMVRKYGIKPKIEHYGCMVDLLARNGLLNEAREMVEK 505
Query: 373 IPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGD 432
+P + D ++W L+ C FH NVE+ E V + +E+E G YVL+ NI A GR
Sbjct: 506 MPMK-PDALIWGALMAGCRFHKNVELAEYVVKHWIELEPDKSGAYVLLGNIYAASGRHAS 564
Query: 433 AERLRRVMDERNAFKVPGCSLV 454
A +R +M E+ K PGCS V
Sbjct: 565 AREIRHLMREKGVDKTPGCSTV 586
>gi|357140545|ref|XP_003571826.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08305-like [Brachypodium distachyon]
Length = 489
Score = 274 bits (700), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 144/382 (37%), Positives = 226/382 (59%), Gaps = 7/382 (1%)
Query: 75 FTYSFLIRTCATLSHPNLGTQLHAVISKVGF-QSHVYVNTALVNMYVSLGFLKDSSKLFD 133
T+ FL R A L+ P L LH+ ++G +++ + V+MY + + +LFD
Sbjct: 61 LTFPFLGRAAARLASPRLALSLHSHPLRLGLLPCDLHIANSFVHMYAACALPDLARRLFD 120
Query: 134 EMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALAL 193
E+P N V+WN ++ G K +L AR +F+ MP R+VVSW+ +IDG + EALAL
Sbjct: 121 EIPRPNPVSWNALLDGYAKCRDLSAAREVFDRMPHRDVVSWSAMIDGCVKCGEYREALAL 180
Query: 194 FRKMVACEY---TEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLI 250
F M A +++T++++L A GD++ + +H Y ++RGF ++R+ L+
Sbjct: 181 FEMMEAAATGHGVRANDVTMISMLGACAHLGDLRRGRQMHRYLQERGFL-LNLRLATSLV 239
Query: 251 DTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPN 310
D YAKCG I A ++F + V +++ W ++I G A+HGMG E VE F MQ G+ P+
Sbjct: 240 DMYAKCGAISEALEVFRAVPVASTDVLMWNAMIGGLAVHGMGMETVELFQEMQHSGVVPD 299
Query: 311 RVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTA 370
+T+L +L+AC HGGLV+E FF + E + P ++HY CL+D+L RAGRLE+A
Sbjct: 300 EITYLGLLSACVHGGLVDEAWRFFCSL-EAQGLRPHVEHYACLVDVLSRAGRLEEAYGVV 358
Query: 371 LGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRF 430
+P E + V V +L AC HG VE+GE V R+++ ++ + G Y+ + NI A R+
Sbjct: 359 KSMPMEPS-VSVLGAILNACHLHGWVELGEVVGRQLVRLQPDHDGRYIGLSNIYAVAKRW 417
Query: 431 GDAERLRRVMDERNAFKVPGCS 452
+A++ R+VM ER K+PG S
Sbjct: 418 QEAKKARKVMSERGLKKIPGFS 439
>gi|296085005|emb|CBI28420.3| unnamed protein product [Vitis vinifera]
Length = 631
Score = 274 bits (700), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 160/440 (36%), Positives = 247/440 (56%), Gaps = 29/440 (6%)
Query: 26 SLLHHSQLFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCA 85
SL+H +NT++ Y + +L+ +L H LP D+FT +I+ CA
Sbjct: 80 SLIH----WNTIIKCYVENQFSHDGIVLFHEL------VHEYLP---DNFTLPCVIKGCA 126
Query: 86 TLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPER------- 138
L G Q+H + K+GF S V+V +LVNMY G + + K+FD M ++
Sbjct: 127 RLGVVQEGKQIHGLALKIGFGSDVFVQGSLVNMYSKCGEIDCARKVFDGMIDKDVVLWNS 186
Query: 139 ----NLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALF 194
NLV+WN MI G +K G+ + A LF +MP ++V+W +I GY + +A+ +F
Sbjct: 187 LIDGNLVSWNAMINGYMKSGDFDSALELFYQMPIWDLVTWNLMIAGYELNGQFMDAVKMF 246
Query: 195 RKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYA 254
M+ + PS T+++VL A+ + + IH Y EK GF D + LI+ YA
Sbjct: 247 FMMLKLG-SRPSHATLVSVLSAVSGLAVLGKGRWIHSYMEKNGFE-LDGILGTSLIEMYA 304
Query: 255 KCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTF 314
KCGCI SA +F ++++K + WT+II G +HGM A+ F M K GLKPN + F
Sbjct: 305 KCGCIESALTVFR--AIQKKKVGHWTAIIVGLGIHGMANHALALFLEMCKTGLKPNAIIF 362
Query: 315 LSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIP 374
+ VLNAC+H GLV++G +FD M+ E ++ P ++HYGCL+D+L RAG LE+A+ T +P
Sbjct: 363 IGVLNACNHAGLVDDGRQYFDMMMNEYKIEPTLEHYGCLVDILCRAGHLEEAKNTIENMP 422
Query: 375 SEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAE 434
+ V+W +LLG HG +++GE ++++E+ G Y+L+ N+ A G +
Sbjct: 423 IS-PNKVIWMSLLGGSRNHGKIDIGEYAAQRVIEVAPETIGCYILLSNMYAASGMWEKVS 481
Query: 435 RLRRVMDERNAFKVPGCSLV 454
+R +M +R K PGCS V
Sbjct: 482 HVREMMYKRGFRKDPGCSSV 501
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 102/425 (24%), Positives = 172/425 (40%), Gaps = 80/425 (18%)
Query: 66 SPLPPLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFL 125
+P L ++ + T S P QLHA K +H +V++ L+ +Y
Sbjct: 5 TPFHSLQQYLPHNLHLSLFQTCSAPQEVEQLHAFSLKTAIFNHPFVSSRLLALYSD---- 60
Query: 126 KDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMN 185
P+ N +L +ARS+F+ + R+++ W II Y
Sbjct: 61 ----------PKIN---------------DLGYARSIFDRIQRRSLIHWNTIIKCYVENQ 95
Query: 186 RSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRV 245
S++ + LF ++V EY P T+ V+ + G V+ + IHG K GF + D+ V
Sbjct: 96 FSHDGIVLFHELVH-EYL-PDNFTLPCVIKGCARLGVVQEGKQIHGLALKIGFGS-DVFV 152
Query: 246 LNCLIDTYAKCGCIFSASKLFEDI---------SVERKNLVSWTS--------------- 281
L++ Y+KCG I A K+F+ + S+ NLVSW +
Sbjct: 153 QGSLVNMYSKCGEIDCARKVFDGMIDKDVVLWNSLIDGNLVSWNAMINGYMKSGDFDSAL 212
Query: 282 ----------------IISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGG 325
+I+G+ ++G +AV+ F M K+G +P+ T +SVL+A S
Sbjct: 213 ELFYQMPIWDLVTWNLMIAGYELNGQFMDAVKMFFMMLKLGSRPSHATLVSVLSAVSGLA 272
Query: 326 LVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRT 385
++ +G M + L I LI+M + G +E A I + V W
Sbjct: 273 VLGKGRWIHSYMEKNGFELDGILGTS-LIEMYAKCGCIESALTVFRAIQKK--KVGHWTA 329
Query: 386 LLGACSFHGNVEMGERVTRKILEM-ERGYGGDYVLMYNILAGVGRFGDAERLRRVMD-ER 443
++ HG M LEM + G + ++ +L G + R+ D
Sbjct: 330 IIVGLGIHG---MANHALALFLEMCKTGLKPNAIIFIGVLNACNHAGLVDDGRQYFDMMM 386
Query: 444 NAFKV 448
N +K+
Sbjct: 387 NEYKI 391
>gi|195611854|gb|ACG27757.1| pentatricopeptide repeat protein PPR868-14 [Zea mays]
Length = 633
Score = 274 bits (700), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 151/427 (35%), Positives = 241/427 (56%), Gaps = 16/427 (3%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNL 92
+ + +H +S + A L L ++ H LP + T S + C L+ +
Sbjct: 89 FYTSAIHAHSSRGLHRAALAL---LSEMLLSRHGLLP---TAHTLSASLPACGCLA---V 139
Query: 93 GTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEM-PERNLVTWNVMITGLV 151
G LH K+ YV TAL+ MY G + LFD M P+ ++V+ M++
Sbjct: 140 GRALHGYAVKLALSGEPYVATALLGMYARAGEAAAARALFDGMRPDPHVVSVTAMLSCYA 199
Query: 152 KWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITIL 211
K G+L+ AR LF+ +P +++V W ++DGYT+ R +EAL LFR+M+ EP E++++
Sbjct: 200 KMGQLDDARGLFDALPRKDLVCWNAMMDGYTQHGRPSEALRLFRQMLR-SGVEPDEVSVV 258
Query: 212 AVLPAIWQNGDVKSCQLIHGY---GEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFED 268
L A+ Q G +S + +H + G +R + RV L+D Y KCG + A +F D
Sbjct: 259 LALSAVAQLGTAESGRWLHSFVANGGRRARVRLNARVGTALVDMYYKCGSLEEAVAVFRD 318
Query: 269 ISVE-RKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLV 327
+ +++V+W ++I+G+AMHG +EA+E FG+++ GL P +TF+ VLNACSH GLV
Sbjct: 319 LGGGGDRDVVAWNAMINGYAMHGRSREALEAFGQLRAQGLWPTDITFIGVLNACSHSGLV 378
Query: 328 EEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLL 387
+EG F M EE ++P ++HYGC++D+LGRAGR+E+A + ++ D +W +LL
Sbjct: 379 DEGRALFAAMEEEYGIVPKVEHYGCMVDLLGRAGRVEEAFDLVQSMKAK-PDAAMWASLL 437
Query: 388 GACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFK 447
GAC H N+ +G+RV ++ G YVL+ N+ A G++ + R+R +M K
Sbjct: 438 GACRLHKNLALGQRVADYLVGNGLANSGTYVLLSNMYAAAGKWREVGRVRSMMRASGVQK 497
Query: 448 VPGCSLV 454
PGCS V
Sbjct: 498 EPGCSAV 504
>gi|224059226|ref|XP_002299777.1| predicted protein [Populus trichocarpa]
gi|222847035|gb|EEE84582.1| predicted protein [Populus trichocarpa]
Length = 439
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 156/382 (40%), Positives = 224/382 (58%), Gaps = 8/382 (2%)
Query: 76 TYSFLIRTCATLSHP--NLGTQLHAVISKVGFQS-HVYVNTALVNMYVSLGFLKDSSKLF 132
T+ L+ CA L +LG LHA K+G + ++ V TALV+MY G ++ S F
Sbjct: 12 TFITLLSGCADLPSQGNSLGPLLHAYTRKLGLDTCNLMVGTALVDMYAKCGHVELSRLCF 71
Query: 133 DEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALA 192
DE+ +N +WN MI G V+ G++ A +F+EMP R V+SWT +I+G+ +M EAL
Sbjct: 72 DELKVKNSFSWNTMIDGFVRNGKIREAIEVFDEMPERGVISWTVLINGFVKMGLFEEALE 131
Query: 193 LFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDT 252
FRKM + EP +TI+ VL A G + +H Y K+G ++++ N LID
Sbjct: 132 WFRKMQVSK-VEPDRVTIVTVLSACANLGALGLGLWVHRYALKKGLRD-NVKICNSLIDL 189
Query: 253 YAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRV 312
Y++CG I A ++FE + + LVSW SII G A +G +EA+E+F MQK G KPN V
Sbjct: 190 YSRCGAIELARQVFEKMG--ERTLVSWNSIIGGLAANGFTEEALEHFDLMQKQGFKPNDV 247
Query: 313 TFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALG 372
+F L ACSH GLV+EGL +FD M ++ P I+HYGC++D+ RAGRLE A
Sbjct: 248 SFTGALTACSHTGLVDEGLKYFDIMERVHKISPRIEHYGCIVDLYSRAGRLEDAMSVVQN 307
Query: 373 IPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGD 432
+P + +VVV +LL AC G+VE+ ER+ ++ ++ G +YVL+ NI A VGR+
Sbjct: 308 MPMKPNEVVV-GSLLAACRTRGDVELAERLMNYLVHLDPGADSNYVLLSNIYAAVGRWDG 366
Query: 433 AERLRRVMDERNAFKVPGCSLV 454
A + R M K PG S +
Sbjct: 367 ACKQRMTMKALGIQKKPGFSSI 388
>gi|115475551|ref|NP_001061372.1| Os08g0249600 [Oryza sativa Japonica Group]
gi|113623341|dbj|BAF23286.1| Os08g0249600 [Oryza sativa Japonica Group]
Length = 951
Score = 273 bits (698), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 154/439 (35%), Positives = 239/439 (54%), Gaps = 18/439 (4%)
Query: 21 LLTTNSLLHHSQLFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFL 80
L+T+ L + L N L+ + + P A LY L + H P P S S
Sbjct: 161 LVTSGWLRRSADLHNALIRALAGSARPHLALPLYAHLLRA---GHHPTPHTLPSLLKSLA 217
Query: 81 IRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVS-LGFLKDSSKLFDEMPERN 139
+ + A L +HA K+G + V+ AL+ ++ LG L D+ L +
Sbjct: 218 L-SPAVPGARGLALAVHAHAVKLGLAGFLLVSNALIRVHAGILGRLSDALVLLRTAASVD 276
Query: 140 LVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVA 199
T+N +IT + G + AR+LF+EMP RN VSW+ +++GY + EAL LF +M A
Sbjct: 277 ASTFNTLITAYARAGRVTDARALFDEMPARNAVSWSAMVNGYVQAGDGREALGLFARMQA 336
Query: 200 CEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVL----NCLIDTYAK 255
+ P + ++ VL A Q G ++ + +HGY A +IR+ L+D YAK
Sbjct: 337 -DGVRPDDTVLVGVLAACAQLGVLEQGKWVHGY-----LKANNIRITVFLGTALVDMYAK 390
Query: 256 CGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFL 315
CG + A ++F+ ++ KN+++WT++I G AMHG G EA+E F +M+++G+KP+ + F+
Sbjct: 391 CGEMQLAMEVFK--VMKEKNVLAWTTMIKGLAMHGRGSEALELFSQMERLGVKPDDIAFI 448
Query: 316 SVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPS 375
L AC+H GLV++G FD MV + + P I+HYGC++D+L R G L +A + +P
Sbjct: 449 GALCACTHTGLVDKGRELFDSMVRKYGIKPKIEHYGCMVDLLARNGLLNEAREMVEKMPM 508
Query: 376 EITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAER 435
+ D ++W L+ C FH NVE+ E V + +E+E G YVL+ NI A GR A
Sbjct: 509 K-PDALIWGALMAGCRFHKNVELAEYVVKHWIELEPDKSGAYVLLGNIYAASGRHASARE 567
Query: 436 LRRVMDERNAFKVPGCSLV 454
+R +M E+ K PGCS V
Sbjct: 568 IRHLMREKGVDKTPGCSTV 586
>gi|225453947|ref|XP_002274056.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350,
chloroplastic-like [Vitis vinifera]
Length = 635
Score = 273 bits (698), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 166/518 (32%), Positives = 259/518 (50%), Gaps = 108/518 (20%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNL 92
L+N ++ +S E P++AF+++ + + D F++S +++ C+ L
Sbjct: 89 LWNAIIKSFSHGEDPREAFVIFNLMLENGV--------CVDKFSFSLVLKACSRLGLIKE 140
Query: 93 GTQLHAVISKVGFQSHVYVNTAL-------------------------------VNMYVS 121
G Q+H ++ ++ S V++ L ++ YV
Sbjct: 141 GMQIHGLLGRMEIGSDVFLQNCLMCLYLRCGCLGIARQLFDRMMKRDSVSFNSMIDGYVK 200
Query: 122 LGFLKDSSKLFD----------------------------------EMPERNLVTWNVMI 147
G +K + +LFD EMP+R+L++WN MI
Sbjct: 201 HGMVKSARELFDVMPMEQKNLISWNSMISGYARSEEGLRVAWELFEEMPKRDLISWNSMI 260
Query: 148 TGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSN------------------- 188
G VK G++E A LF +MP R+VVSW ++DGY ++ +
Sbjct: 261 DGCVKCGKMENAHHLFNQMPKRDVVSWANMVDGYAKLGEIDIARGLFDEMPERDVISCNA 320
Query: 189 ------------EALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKR 236
EAL F M++ + P T+L L AI Q G +H Y E
Sbjct: 321 MMAGYVQNGHLMEALNFFHDMLSRKELFPDNATLLITLSAIAQLGHFDEGVALHCYIEDN 380
Query: 237 GFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAV 296
GF+ + ++ LID YAKCG I +A +FEDI + K++ W +II G A+HG+G+ A
Sbjct: 381 GFSLSE-KLGVALIDMYAKCGSIDNALSVFEDI--DDKSIDHWNAIIGGLAIHGLGEVAF 437
Query: 297 ENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDM 356
E F M+K+ +KP+ +TF+ VLNAC+H GLV+EGL F+ M +V P ++HYGC++D+
Sbjct: 438 ELFMEMEKLFVKPDDITFIGVLNACNHAGLVKEGLMCFELMRRVHKVEPKLQHYGCMVDI 497
Query: 357 LGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGD 416
LGRAG +E+A+K +P E D VVWRTLL AC H N +GE V + ++ ++
Sbjct: 498 LGRAGHVEEAKKFVEKMPIEPND-VVWRTLLSACRNHENFTIGEPVAKHLISVDSYNPSS 556
Query: 417 YVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
YVL+ NI AG G + D R+R +M +R+ K+PGCS +
Sbjct: 557 YVLLSNIYAGFGMWNDVYRIRMMMKQRDLKKIPGCSQI 594
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 54/113 (47%), Gaps = 9/113 (7%)
Query: 272 ERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGL 331
++ N W +II F+ +EA F M + G+ ++ +F VL ACS GL++EG+
Sbjct: 83 KQDNPFLWNAIIKSFSHGEDPREAFVIFNLMLENGVCVDKFSFSLVLKACSRLGLIKEGM 142
Query: 332 NFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWR 384
++ E+ D+ CL+ + R G LGI ++ D ++ R
Sbjct: 143 QIHG-LLGRMEIGSDVFLQNCLMCLYLRCG--------CLGIARQLFDRMMKR 186
>gi|357462223|ref|XP_003601393.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|358344321|ref|XP_003636238.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355490441|gb|AES71644.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355502173|gb|AES83376.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 486
Score = 273 bits (698), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 160/469 (34%), Positives = 265/469 (56%), Gaps = 41/469 (8%)
Query: 17 IHSHLLTTNSLLHHSQLFNTLLHFYSLA-------------ESPQKAFLLYKQLQQIYTH 63
IH+H T L H+ + L F +++ + PQ Y L + ++H
Sbjct: 26 IHAHAFRT-CLHQHAVVLGKLFRFAAVSPFGDLSYAHNMFDQMPQPTTFFYNTLIRAHSH 84
Query: 64 SHSP-LPPLF-----------DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYV 111
S +P LF D F+++FL+++ + + P L +H + K GF H++V
Sbjct: 85 STTPSFSSLFFNRMRRNSIAPDEFSFTFLLKS-RSFTMP-LVHDIHGAVFKFGFCRHLHV 142
Query: 112 NTALVNMYVSLGFLKDSSKLFDEMP----ERNLVTWNVMITGLVKWGELEFARSLFEEMP 167
AL+++Y G + K+F++ + ++V+W+ ++ K GEL+ AR +F+ MP
Sbjct: 143 QNALIHLYAVGGVTISARKVFEDAVRVGLDVDIVSWSGLLVAHAKAGELDVARKVFDGMP 202
Query: 168 CRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQ 227
R+VVSWT ++ Y++ R +E L LF++M P E+T+L+V+ A + GD + +
Sbjct: 203 ERDVVSWTIMLSAYSKAKRPHETLDLFQEMRLAG-VWPDEVTVLSVISACAELGDAEMGR 261
Query: 228 LIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFA 287
++H + E+ GF + + + N LID Y KCGC+ A ++F+ +RK+L++W +++ A
Sbjct: 262 MVHKFVEENGF-GWMVALCNSLIDMYGKCGCLEEAWQVFD--RTKRKSLITWNAMMMVCA 318
Query: 288 MHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDI 347
HG ++A F M G+ P+ VT L++L A +H G V+EG+ F+ M + V P I
Sbjct: 319 NHGYAEDAFRLFEGMIGSGVVPDGVTILALLVAYAHKGFVDEGIRLFESMQRDYGVEPRI 378
Query: 348 KHYGCLIDMLGRAGRLEQAEK--TALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRK 405
+HYG ++DMLGR+GRL++A T++ IPS + V+W LLGAC HG+V MGERV +K
Sbjct: 379 EHYGAVVDMLGRSGRLQEAYNLLTSMPIPS---NDVIWGALLGACRIHGDVGMGERVIKK 435
Query: 406 ILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
+LE++ GG Y+L+ +I GR +A +R+ M A K PGCS V
Sbjct: 436 LLELKPDEGGYYILLRDIYVAAGRTAEANEMRQAMLASGARKNPGCSWV 484
>gi|15227199|ref|NP_179827.1| protein slow growth 1 [Arabidopsis thaliana]
gi|75206347|sp|Q9SJZ3.1|PP169_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g22410, mitochondrial; Flags: Precursor
gi|4544450|gb|AAD22358.1| hypothetical protein [Arabidopsis thaliana]
gi|18086349|gb|AAL57637.1| At2g22410/F14M13.19 [Arabidopsis thaliana]
gi|309260071|gb|ADO62711.1| SLOW GROWTH1 [Arabidopsis thaliana]
gi|330252206|gb|AEC07300.1| protein slow growth 1 [Arabidopsis thaliana]
Length = 681
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 144/421 (34%), Positives = 239/421 (56%), Gaps = 13/421 (3%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+N L++ Y +KA +YK ++ S P D T L+ +C+ L N G
Sbjct: 225 WNCLINGYKKIGEAEKAIYVYKLME-----SEGVKP---DDVTMIGLVSSCSMLGDLNRG 276
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
+ + + + G + + + AL++M+ G + ++ ++FD + +R +V+W MI+G +
Sbjct: 277 KEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARC 336
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
G L+ +R LF++M ++VV W +I G + R +ALALF++M T+P EIT++
Sbjct: 337 GLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSN-TKPDEITMIHC 395
Query: 214 LPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVER 273
L A Q G + IH Y EK + ++ + L+D YAKCG I A +F I +
Sbjct: 396 LSACSQLGALDVGIWIHRYIEKYSLS-LNVALGTSLVDMYAKCGNISEALSVFHGI--QT 452
Query: 274 KNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNF 333
+N +++T+II G A+HG A+ F M G+ P+ +TF+ +L+AC HGG+++ G ++
Sbjct: 453 RNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDY 512
Query: 334 FDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFH 393
F +M + P +KHY ++D+LGRAG LE+A++ +P E D VW LL C H
Sbjct: 513 FSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLMESMPME-ADAAVWGALLFGCRMH 571
Query: 394 GNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSL 453
GNVE+GE+ +K+LE++ G YVL+ + + DA+R RR+M+ER K+PGCS
Sbjct: 572 GNVELGEKAAKKLLELDPSDSGIYVLLDGMYGEANMWEDAKRARRMMNERGVEKIPGCSS 631
Query: 454 V 454
+
Sbjct: 632 I 632
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 98/372 (26%), Positives = 186/372 (50%), Gaps = 30/372 (8%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+N + +S +E+P+++FLLYKQ+ + H D FTY L + CA L +LG
Sbjct: 121 WNVTIRGFSESENPKESFLLYKQMLR-----HGCCESRPDHFTYPVLFKVCADLRLSSLG 175
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
+ + K+ + +V+ A ++M+ S G ++++ K+FDE P R+LV+WN +I G K
Sbjct: 176 HMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKI 235
Query: 154 GELEFARSLFEEMPCRNV----VSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEIT 209
GE E A +++ M V V+ G++ + + N + EY + + +
Sbjct: 236 GEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFY------EYVKENGLR 289
Query: 210 IL-----AVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASK 264
+ A++ + GD+ + I EKR ++ +I YA+CG + + K
Sbjct: 290 MTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSW-----TTMISGYARCGLLDVSRK 344
Query: 265 LFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHG 324
LF+D+ E K++V W ++I G G++A+ F MQ KP+ +T + L+ACS
Sbjct: 345 LFDDM--EEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQL 402
Query: 325 GLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWR 384
G ++ G+ + + +E+ + ++ L+DM + G + +A GI + + + +
Sbjct: 403 GALDVGI-WIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGI--QTRNSLTYT 459
Query: 385 TLLGACSFHGNV 396
++G + HG+
Sbjct: 460 AIIGGLALHGDA 471
Score = 38.9 bits (89), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 69/169 (40%), Gaps = 10/169 (5%)
Query: 271 VERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGL---KPNRVTFLSVLNACSHGGLV 327
+E N+ SW I GF+ KE+ + +M + G +P+ T+ + C+ L
Sbjct: 113 IENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLS 172
Query: 328 EEGLNFFDKMVE-ECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTL 386
G +++ E++ + + I M G +E A K P + D+V W L
Sbjct: 173 SLGHMILGHVLKLRLELVSHV--HNASIHMFASCGDMENARKVFDESP--VRDLVSWNCL 228
Query: 387 LGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAER 435
+ G E V K++E E G D V M +++ GD R
Sbjct: 229 INGYKKIGEAEKAIYVY-KLMESE-GVKPDDVTMIGLVSSCSMLGDLNR 275
>gi|225450761|ref|XP_002279376.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 584
Score = 272 bits (696), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 161/456 (35%), Positives = 247/456 (54%), Gaps = 45/456 (9%)
Query: 31 SQLFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHP 90
S + T++ + A++P+KA Y ++Q + FT+ F+++
Sbjct: 91 SYSWTTMIRGFVEAKNPEKALEFYGLMRQRGVE--------LNKFTFLFVLKAYGLRPSY 142
Query: 91 NLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGL 150
G +H + KVGF V+ AL++MY+ G + D+ LFDEMP N+VTWN MITG
Sbjct: 143 QEGRIVHGKLVKVGFCYDVFTRNALIHMYLKCGSITDAHLLFDEMPNHNVVTWNTMITGC 202
Query: 151 VKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMN------------------------- 185
G+ E AR LF EMP RNV SW ++ GY+++
Sbjct: 203 FGCGDTERARRLFGEMPERNVGSWNAVVGGYSKLGHVDIARSLFDLMPERDVVSWGSMIS 262
Query: 186 ------RSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFT 239
R+ EAL LF++M+ + S I I ++L A Q G + + IH Y KR
Sbjct: 263 AYVQNGRAAEALELFKEMMLAGVSADS-IIITSILSACAQIGALDMGRWIHAY-MKRSKL 320
Query: 240 AFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENF 299
D+ + L+D YAKCGCI +A +F ++ RKNL SW +++SG A+HG G A+E F
Sbjct: 321 RNDVFLDTALVDMYAKCGCIDTAFGVFN--TMPRKNLCSWNAMLSGLAIHGHGFAALELF 378
Query: 300 GRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGR 359
+M+ G+ PN +TF++VL+ACSH G VEEG F++M +E + P ++HYGC++D+L R
Sbjct: 379 KQMESTGVGPNDITFVAVLSACSHIGSVEEGWKKFNQMDKEFNITPKVEHYGCMVDILCR 438
Query: 360 AGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVL 419
G + +A++ +P E +VV+W LL AC HG +GE V I ++ GG YVL
Sbjct: 439 QGLINEAKEMIRTMPLE-PNVVIWGALLNACKVHGYTNVGEDVVGYIQKLVSEDGGCYVL 497
Query: 420 MYNILAGVGRFGDAERLRRVMDERNA-FKVPGCSLV 454
+ NI A ++ + E+ R++M + K+PG S +
Sbjct: 498 LSNIFAAKSQWNEVEKTRKMMKQMGVEKKIPGYSSI 533
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 87/200 (43%), Gaps = 21/200 (10%)
Query: 260 FSASKLFEDISVERKNL---------------VSWTSIISGFAMHGMGKEAVENFGRMQK 304
F A+K E +V +N+ SWT++I GF ++A+E +G M++
Sbjct: 60 FIATKTVESYAVSARNIDYAFWVFVGINYPDSYSWTTMIRGFVEAKNPEKALEFYGLMRQ 119
Query: 305 VGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLE 364
G++ N+ TFL VL A +EG K+V + D+ LI M + G +
Sbjct: 120 RGVELNKFTFLFVLKAYGLRPSYQEGRIVHGKLV-KVGFCYDVFTRNALIHMYLKCGSIT 178
Query: 365 QAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNIL 424
A +P+ +VV W T++ C G+ E R+ ++ E G V Y+ L
Sbjct: 179 DAHLLFDEMPNH--NVVTWNTMITGCFGCGDTERARRLFGEMPERNVGSWNAVVGGYSKL 236
Query: 425 AGVGRFGDAERLRRVMDERN 444
G A L +M ER+
Sbjct: 237 ---GHVDIARSLFDLMPERD 253
>gi|356546516|ref|XP_003541672.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Glycine max]
Length = 591
Score = 272 bits (696), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 153/431 (35%), Positives = 251/431 (58%), Gaps = 46/431 (10%)
Query: 26 SLLHHSQLF--NTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRT 83
+++H+ +F NT++ Y+ +++P AFL Y+Q+ S + P D+ TY FL++
Sbjct: 76 TVIHNPNVFTWNTIIRGYAESDNPSPAFLFYRQMVV------SCVEP--DTHTYPFLLKA 127
Query: 84 CATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTW 143
+ + G +H+V + GF+S V+V +L+++Y + G + + K+F+ M E
Sbjct: 128 ISKSLNVREGEAIHSVTIRNGFESLVFVQNSLLHIYAACGDTESAYKVFELMKE------ 181
Query: 144 NVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYT 203
R++V+W +I+G+ R NEAL LFR+M + E
Sbjct: 182 -------------------------RDLVAWNSMINGFALNGRPNEALTLFREM-SVEGV 215
Query: 204 EPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSAS 263
EP T++++L A + G ++ + +H Y K G + + V N L+D YAKCG I A
Sbjct: 216 EPDGFTVVSLLSASAELGALELGRRVHVYLLKVGLSK-NSHVTNSLLDLYAKCGAIREAQ 274
Query: 264 KLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSH 323
++F ++S +N VSWTS+I G A++G G+EA+E F M+ GL P+ +TF+ VL ACSH
Sbjct: 275 RVFSEMS--ERNAVSWTSLIVGLAVNGFGEEALELFKEMEGQGLVPSEITFVGVLYACSH 332
Query: 324 GGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVW 383
G+++EG +F +M EEC ++P I+HYGC++D+L RAG ++QA + +P + + V+W
Sbjct: 333 CGMLDEGFEYFRRMKEECGIIPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQ-PNAVIW 391
Query: 384 RTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDER 443
RTLLGAC+ HG++ +GE +L +E + GDYVL+ N+ A R+ D + +RR M +
Sbjct: 392 RTLLGACTIHGHLGLGEIARSHLLNLEPKHSGDYVLLSNLYASERRWSDVQVIRRSMLKD 451
Query: 444 NAFKVPGCSLV 454
K PG SLV
Sbjct: 452 GVKKTPGYSLV 462
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/259 (29%), Positives = 134/259 (51%), Gaps = 18/259 (6%)
Query: 156 LEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKM-VACEYTEPSEITILAVL 214
+ +A ++F + NV +W II GY + + A +R+M V+C EP T +L
Sbjct: 68 MSYAYNVFTVIHNPNVFTWNTIIRGYAESDNPSPAFLFYRQMVVSC--VEPDTHTYPFLL 125
Query: 215 PAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERK 274
AI ++ +V+ + IH + GF + + V N L+ YA CG SA K+FE ++ +
Sbjct: 126 KAISKSLNVREGEAIHSVTIRNGFESL-VFVQNSLLHIYAACGDTESAYKVFE--LMKER 182
Query: 275 NLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFF 334
+LV+W S+I+GFA++G EA+ F M G++P+ T +S+L+A + G +E G
Sbjct: 183 DLVAWNSMINGFALNGRPNEALTLFREMSVEGVEPDGFTVVSLLSASAELGALELGRRVH 242
Query: 335 DKMVEECEVLPDIKHY-GCLIDMLGRAGRLEQAEKTALGIPSEITD--VVVWRTLLGACS 391
+++ L H L+D+ + G + +A++ + SE+++ V W +L+ +
Sbjct: 243 VYLLKVG--LSKNSHVTNSLLDLYAKCGAIREAQR----VFSEMSERNAVSWTSLIVGLA 296
Query: 392 FHGNVEMGERVTRKILEME 410
+G GE EME
Sbjct: 297 VNG---FGEEALELFKEME 312
>gi|242047426|ref|XP_002461459.1| hypothetical protein SORBIDRAFT_02g003000 [Sorghum bicolor]
gi|241924836|gb|EER97980.1| hypothetical protein SORBIDRAFT_02g003000 [Sorghum bicolor]
Length = 568
Score = 272 bits (696), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 155/421 (36%), Positives = 238/421 (56%), Gaps = 44/421 (10%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
NT+L + + P A L H+ PP D+ TY L++ CA L G
Sbjct: 89 LNTVLRIAASSSRPSLALAL---------HARRLAPP--DTHTYPPLLQACARLLSLRHG 137
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
++HA +K G + V+V +LV++Y + G + + ++FDE+P
Sbjct: 138 ERIHAEAAKNGLATLVFVKNSLVHLYGACGLFESAHRVFDEIP----------------V 181
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
GE RN+VSW +++G+ R NE L +FR+M+ + P T+++V
Sbjct: 182 GE-------------RNLVSWNSMLNGFAANGRPNEVLTIFREMLDVNFM-PDGFTVVSV 227
Query: 214 LPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVER 273
L A + G + + +H Y K G + V N LID YAKCG + A ++FE++ R
Sbjct: 228 LTASAEIGALALGRRVHVYLTKVGLVE-NSHVGNALIDLYAKCGGVEDARRVFEEMGA-R 285
Query: 274 KNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNF 333
+ +VSWTS+I G A++G GKEA+E FG M++ L P +T + VL ACSH GLV++G +
Sbjct: 286 RTVVSWTSLIVGLAVNGFGKEALELFGIMEREKLVPTEITMVGVLYACSHCGLVDDGFMY 345
Query: 334 FDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFH 393
F++M EE + P I+H GC++D+LGRAG++++A L +P E + VVWRTLLGAC+ H
Sbjct: 346 FNRMKEEYNIAPRIEHLGCMVDLLGRAGKVKEAYDYILTMPLE-PNAVVWRTLLGACAMH 404
Query: 394 GNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSL 453
+E+GE +++E++ G+ GDYVL+ N+ A VGR+ D LR+ M + K PG SL
Sbjct: 405 KKLELGEAAWARLVELDPGHSGDYVLLSNLYAAVGRWADVHVLRKTMVKDGVRKNPGRSL 464
Query: 454 V 454
V
Sbjct: 465 V 465
>gi|359493640|ref|XP_002282675.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g06145-like [Vitis vinifera]
Length = 464
Score = 272 bits (695), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 151/412 (36%), Positives = 225/412 (54%), Gaps = 35/412 (8%)
Query: 74 SFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFD 133
SFT+S L++ C+ +S G +H I K GF SHV+V TALV+ Y + G + ++ ++FD
Sbjct: 10 SFTFSSLVKACSLVSELGFGEAVHGHIWKYGFDSHVFVQTALVDFYGNAGKIVEARRVFD 69
Query: 134 EMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALAL 193
EM ER++ W MI+ + G++ AR LF+EMP RN SW +IDGY+R+ A L
Sbjct: 70 EMSERDVFAWTTMISVHARTGDMSSARQLFDEMPVRNTASWNAMIDGYSRLRNVESAELL 129
Query: 194 FRK-----------MVAC-----EYTE--------------PSEITILAVLPAIWQNGDV 223
F + M+AC ++ E P E+T+ ++ A G +
Sbjct: 130 FSQMPNRDIISWTTMIACYSQNKQFREALAVFNEMQTNGIDPDEVTMATIISACAHLGAL 189
Query: 224 KSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSII 283
+ IH Y + GF D+ + + LID YAKCG + + +F + +KNL W SII
Sbjct: 190 DLGKEIHLYAMEMGFD-LDVYIGSALIDMYAKCGSLDKSLVVF--FKLRKKNLFCWNSII 246
Query: 284 SGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEV 343
G A+HG +EA+ F RMQ+ +KPN VTF+SVL AC+H GLVEEG F M + +
Sbjct: 247 EGLAVHGYAEEALAMFSRMQREKIKPNGVTFISVLGACTHAGLVEEGRKRFLSMSRDFSI 306
Query: 344 LPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVT 403
P+I+HYGC++D+LG+AG LE A + + E + V+W LLG C H N+++ +
Sbjct: 307 PPEIEHYGCMVDLLGKAGLLEDALELVRSMRME-PNSVIWGALLGGCKLHRNLKIAQVAV 365
Query: 404 RKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKV-PGCSLV 454
+ +E G Y L+ N+ A V R+ + +R M E K PG S +
Sbjct: 366 NESKVLEPNNSGYYTLLVNMYAEVNRWSEVANIRATMKELGVEKTSPGSSWI 417
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 117/263 (44%), Gaps = 55/263 (20%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+ T++ YS + ++A ++ ++Q T+ P D T + +I CA L +LG
Sbjct: 141 WTTMIACYSQNKQFREALAVFNEMQ---TNGIDP-----DEVTMATIISACAHLGALDLG 192
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
++H ++GF VY+ +AL++MY G L S +F ++ ++NL WN +I GL
Sbjct: 193 KEIHLYAMEMGFDLDVYIGSALIDMYAKCGSLDKSLVVFFKLRKKNLFCWNSIIEGLA-- 250
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
+ GY + EALA+F +M E +P+ +T ++V
Sbjct: 251 ------------------------VHGY-----AEEALAMFSRMQR-EKIKPNGVTFISV 280
Query: 214 LPAIWQNGDVKSCQLIHGYGEKRGFTAF-------DIRVLNCLIDTYAKCGCIFSASKLF 266
L A G V+ G KR + +I C++D K G + A +L
Sbjct: 281 LGACTHAGLVEE-------GRKRFLSMSRDFSIPPEIEHYGCMVDLLGKAGLLEDALELV 333
Query: 267 EDISVERKNLVSWTSIISGFAMH 289
+ +E N V W +++ G +H
Sbjct: 334 RSMRME-PNSVIWGALLGGCKLH 355
>gi|297740165|emb|CBI30347.3| unnamed protein product [Vitis vinifera]
Length = 560
Score = 272 bits (695), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 157/463 (33%), Positives = 247/463 (53%), Gaps = 28/463 (6%)
Query: 4 LQNSQTPNNITTQIHSHLLTTNSLLHHSQLFNTLLHFYSLAESPQKAFLLYKQLQQIYTH 63
L NS + + TT + + + + +++L +NT + YS S L+ ++++
Sbjct: 114 LCNSLSNFSYTTSVFNGVSSPSTVL-----WNTYIKGYSENYSVSLTVSLFIRMKR---- 164
Query: 64 SHSPLPPLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLG 123
+P D FTY LI+ C+ + G H + G V+V T+L+++Y G
Sbjct: 165 -SDAVP---DKFTYPSLIKACSKVCGVKEGVAFHGSAVRCGVGGDVFVMTSLIDLYGKCG 220
Query: 124 FLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTR 183
+ + K+FDEM ERN+V+W MI G + +L AR LF+EMP +N VSW II GY +
Sbjct: 221 EILCARKVFDEMGERNVVSWTAMIAGYASFSDLVEARKLFDEMPEKNAVSWNAIISGYVK 280
Query: 184 MNRSNEALALF-------RKMVACEY-----TEPSEITILAVLPAIWQNGDVKSCQLIHG 231
A +F R +VA +P E +++++ A Q G ++ + +
Sbjct: 281 CGDLRSARKMFDEMPHRNRDVVAWSALISGNVKPDEFIMVSLMSACSQMGSLELAKWVDD 340
Query: 232 YGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGM 291
Y K V+ LID AKCG + A+KLFE++ +++L+S+ S++ G ++HG
Sbjct: 341 YVRKSSIDVHRAHVIAALIDMNAKCGSMDRATKLFEEM--PKRDLISYCSMMQGLSIHGC 398
Query: 292 GKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYG 351
G +AV F RM GL P+ V F +L ACS GLV+EG +F+ M + ++P HY
Sbjct: 399 GPQAVSLFSRMLNEGLTPDDVAFTVILTACSRAGLVDEGCYYFESMKTDYSIVPSPDHYA 458
Query: 352 CLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMER 411
C++D+LGRAGRL++A + +P E W LLGAC H ++E+GE V ++ E+E
Sbjct: 459 CMVDLLGRAGRLKEAYELLKSMPVE-PHAGAWGALLGACKLHCDIELGEVVADQLFELEP 517
Query: 412 GYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
G+YVL+ NI A ++ D LR M ER K+PGCS +
Sbjct: 518 QNAGNYVLLSNIYAAAEQWLDVSLLRNKMRERGIRKIPGCSWI 560
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 95/410 (23%), Positives = 156/410 (38%), Gaps = 87/410 (21%)
Query: 68 LPPL--FDSFT-YSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGF 124
LP L FD+ + S L++ C T S Q+HA I + G ++ + + + SL
Sbjct: 64 LPTLRSFDTTSSISTLLKACTTTSTLE---QVHARIIRKGLHQDHFIISQFLTLCNSLSN 120
Query: 125 LKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRM 184
++ +F+ + + V WN I G + + SLF RM
Sbjct: 121 FSYTTSVFNGVSSPSTVLWNTYIKGYSENYSVSLTVSLF------------------IRM 162
Query: 185 NRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIR 244
RS+ P + T +++ A + VK HG + G D+
Sbjct: 163 KRSDAV--------------PDKFTYPSLIKACSKVCGVKEGVAFHGSAVRCGVGG-DVF 207
Query: 245 VLNCLIDTYAKCGCIFSASKLFEDI-----------------------------SVERKN 275
V+ LID Y KCG I A K+F+++ + KN
Sbjct: 208 VMTSLIDLYGKCGEILCARKVFDEMGERNVVSWTAMIAGYASFSDLVEARKLFDEMPEKN 267
Query: 276 LVSWTSIISGFAMHGMGKEAVENFGRMQ-------------KVGLKPNRVTFLSVLNACS 322
VSW +IISG+ G + A + F M +KP+ +S+++ACS
Sbjct: 268 AVSWNAIISGYVKCGDLRSARKMFDEMPHRNRDVVAWSALISGNVKPDEFIMVSLMSACS 327
Query: 323 HGGLVEEGLNFFDKMVEECEVLPDIKHY-GCLIDMLGRAGRLEQAEKTALGIPSEITDVV 381
G +E + D V + + H LIDM + G +++A K +P D++
Sbjct: 328 QMGSLELA-KWVDDYVRKSSIDVHRAHVIAALIDMNAKCGSMDRATKLFEEMPKR--DLI 384
Query: 382 VWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFG 431
+ +++ S HG + ++L G D V IL R G
Sbjct: 385 SYCSMMQGLSIHGCGPQAVSLFSRML--NEGLTPDDVAFTVILTACSRAG 432
>gi|413947530|gb|AFW80179.1| hypothetical protein ZEAMMB73_142662 [Zea mays]
Length = 649
Score = 272 bits (695), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 145/363 (39%), Positives = 214/363 (58%), Gaps = 5/363 (1%)
Query: 92 LGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLV 151
LG Q+H + G + V ALV+MY ++ + KLFD M R++V+W +++GL
Sbjct: 163 LGMQVHGRVVGSGVLPDLRVENALVDMYAECADMESAWKLFDGMQVRSVVSWTSLLSGLT 222
Query: 152 KWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITIL 211
+ G ++ AR LF MP R+ VSWT +IDGY + R EAL +FR+M C E T++
Sbjct: 223 RLGRVDEARDLFGRMPERDTVSWTAMIDGYVQAARFREALEMFREM-QCSNVSADEFTMV 281
Query: 212 AVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISV 271
+V+ A Q G ++ + + Y ++G D V N LID Y+KCG I A +F+D+
Sbjct: 282 SVITACAQLGALEMGEWVRVYMSRQGIK-MDAFVGNALIDMYSKCGSIERALDVFKDM-- 338
Query: 272 ERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGL 331
++ +WT+II G A++G G+EA+E F RM V P+ VTF+ VL AC+H GLV++G
Sbjct: 339 HHRDKFTWTAIILGLAVNGYGEEAIEMFHRMIGVSETPDEVTFIGVLTACTHAGLVDKGR 398
Query: 332 NFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACS 391
FF M E + P++ HYGC+ID+ GRAG++ +A +P + +W TLL AC
Sbjct: 399 EFFLSMRETYNIAPNVVHYGCIIDLFGRAGKITEALDAIDQMPM-TPNSTIWGTLLAACR 457
Query: 392 FHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGC 451
HGN E+GE VT ++L+M+ Y L+ NI A R+ D RLR + E+ K PGC
Sbjct: 458 VHGNSEIGELVTERLLQMDPENSTVYTLLSNIYAKCNRWEDVRRLRHTIMEKGIKKEPGC 517
Query: 452 SLV 454
SL+
Sbjct: 518 SLI 520
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/257 (21%), Positives = 104/257 (40%), Gaps = 41/257 (15%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+ ++ Y A ++A +++++Q + D FT +I CA L +G
Sbjct: 245 WTAMIDGYVQAARFREALEMFREMQCSNVSA--------DEFTMVSVITACAQLGALEMG 296
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
+ +S+ G + +V AL++MY G ++ + +F +M R+ TW +I GL
Sbjct: 297 EWVRVYMSRQGIKMDAFVGNALIDMYSKCGSIERALDVFKDMHHRDKFTWTAIILGLA-- 354
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
++GY EA+ +F +M+ T P E+T + V
Sbjct: 355 ------------------------VNGY-----GEEAIEMFHRMIGVSET-PDEVTFIGV 384
Query: 214 LPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVER 273
L A G V + + A ++ C+ID + + G I A + + +
Sbjct: 385 LTACTHAGLVDKGREFFLSMRETYNIAPNVVHYGCIIDLFGRAGKITEALDAIDQMPMT- 443
Query: 274 KNLVSWTSIISGFAMHG 290
N W ++++ +HG
Sbjct: 444 PNSTIWGTLLAACRVHG 460
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 78/265 (29%), Positives = 113/265 (42%), Gaps = 30/265 (11%)
Query: 159 ARSLFEEMPCRNVVSW-TGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAI 217
AR L E +P R +V+ + GY RM L R + YT P +L A+
Sbjct: 8 ARRLLEGIPRRCLVAAREDAVAGYARM--------LARGAMPDAYTFPP------LLKAV 53
Query: 218 WQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLV 277
+ + +H + K G + V L+ YA G +A L + ER V
Sbjct: 54 ARGSSAAPVRAVHAHVVKFGM-GRNAHVATSLVTAYAAGGDGAAARALLSE--RERDTPV 110
Query: 278 SWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHG-GLVEEGLNFFDK 336
W ++ISG EA +F M + G P VT++SVL+AC G G V G+ +
Sbjct: 111 VWNALISGHNRCRRFGEACCSFVDMARAGAAPTPVTYVSVLSACGKGTGDVLLGMQVHGR 170
Query: 337 MVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNV 396
+V VLPD++ L+DM +E A K G+ ++ VV W +LL + G V
Sbjct: 171 VVGS-GVLPDLRVENALVDMYAECADMESAWKLFDGM--QVRSVVSWTSLLSGLTRLGRV 227
Query: 397 E--------MGERVTRKILEMERGY 413
+ M ER T M GY
Sbjct: 228 DEARDLFGRMPERDTVSWTAMIDGY 252
>gi|413938708|gb|AFW73259.1| hypothetical protein ZEAMMB73_606431 [Zea mays]
Length = 488
Score = 272 bits (695), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 148/363 (40%), Positives = 217/363 (59%), Gaps = 8/363 (2%)
Query: 95 QLHAVISKVGFQ---SHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLV 151
Q+HA++ K G SHV T+L+ Y LG + D+ K+FD M +R +VTWNV++ L+
Sbjct: 82 QIHALLVKSGGSRAVSHVQAFTSLIRAYARLGRVCDARKVFDGMADRTVVTWNVLLDALI 141
Query: 152 KWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITIL 211
+ G+L+ A +F +MP RN VSW II G+ R + A+ LF +M P E T++
Sbjct: 142 RDGDLDAAWEVFVKMPQRNAVSWNTIISGFARNGWAPVAVDLFIEMTVAYGLAPDEATMV 201
Query: 212 AVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISV 271
+ A+ G + + HGY +R F+ D + L+ Y +CG + +A F +SV
Sbjct: 202 GFVSAVRDIGLLAIGKSAHGYVLRREFS-LDGPLGVALVSMYTRCGSMGAAHSCF--LSV 258
Query: 272 ERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGL 331
KN+ WTS+I+GFA HG + A+ F M++VG++PN VTF++VL+ACSHGGLV+EG
Sbjct: 259 TTKNVEHWTSLIAGFAAHGQPENALRLFVEMRQVGIEPNGVTFVAVLSACSHGGLVDEGF 318
Query: 332 NFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACS 391
+FD M + P I+HYGCL+D+LGRAG L++A A +P E V+W +LL AC
Sbjct: 319 KYFDLM-RSMGIRPMIQHYGCLVDLLGRAGFLKEAFNLASNLP-EDPGFVIWSSLLAACR 376
Query: 392 FHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGC 451
HGNVEM E K+ E + +G YVL+ N A ++ D++R RR M+E K PG
Sbjct: 377 SHGNVEMAELTASKLAEAKPSHGSSYVLLSNTYARAEQWEDSKRTRRRMEEHRVAKKPGL 436
Query: 452 SLV 454
S +
Sbjct: 437 SWI 439
>gi|357439099|ref|XP_003589826.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355478874|gb|AES60077.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 526
Score = 271 bits (694), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 154/386 (39%), Positives = 233/386 (60%), Gaps = 10/386 (2%)
Query: 72 FDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKL 131
FDS++ +++++ L+ LG Q+H V G +V V ++L+ MY S + + KL
Sbjct: 110 FDSYSLPYVLKSVVCLNDFGLGKQIHCVGVVTGLDKNVSVCSSLIQMY-SCYDVCSARKL 168
Query: 132 FDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRN--VVSWTGIIDGYTRMNRSNE 189
FDE V N MI VK G++ AR LF+ M R+ V SWT +I GYT+ + NE
Sbjct: 169 FDEFGGNGCVL-NAMIVAYVKVGDVSNARKLFDSMLERDKDVFSWTAMISGYTQAHNPNE 227
Query: 190 ALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCL 249
A+ LFR+M E +P EI ILAVL A G + + IH Y EK + + + N L
Sbjct: 228 AIKLFRRM-QLENVKPDEIAILAVLSACADLGALHLGEWIHNYIEKHKLSKI-VPLYNSL 285
Query: 250 IDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVG-LK 308
ID YAK G I A +LFE++ + K +++WT++I+G A+HG+GKEA+ F M+K +K
Sbjct: 286 IDMYAKSGNIRKALELFENM--KHKTIITWTTMIAGLALHGLGKEALRVFSCMEKEDRVK 343
Query: 309 PNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEK 368
PN VTF+++L+ACSH GLVE G ++F M + P I+HYGC+ID+LGRAG L++A++
Sbjct: 344 PNEVTFIAILSACSHVGLVELGRDYFTSMRSRYGIEPKIEHYGCMIDLLGRAGHLQEAKE 403
Query: 369 TALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVG 428
L +P E + +W +LL A + G+ E+ E R + +E G+ G+Y L+ N A +G
Sbjct: 404 MVLRMPFE-ANAAIWGSLLAASTRCGDAELAEEALRHLTVLEPGHCGNYSLLSNTYASLG 462
Query: 429 RFGDAERLRRVMDERNAFKVPGCSLV 454
R+ ++ +R+VM + KVPG S +
Sbjct: 463 RWNESRMVRKVMQDAGVEKVPGVSFI 488
>gi|227462996|gb|ACP39950.1| pentatricopeptide repeat protein [Gossypium hirsutum]
gi|227462998|gb|ACP39951.1| pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 532
Score = 271 bits (693), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 158/428 (36%), Positives = 243/428 (56%), Gaps = 16/428 (3%)
Query: 26 SLLHHSQ-LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTC 84
SL H + ++NT++ + A LYK + Q LP +++T+SF++R C
Sbjct: 69 SLPHRTTFIWNTIIRIFVEKNENATALSLYKNMLQT-----GFLP---NNYTFSFVLRAC 120
Query: 85 ATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWN 144
S L + HA + K+G++S+ +V L+++Y + ++ + KLFD R+++TW
Sbjct: 121 TDNSPVGLAS--HAQVIKLGWESYDFVLNGLIHLYANWSSVEAARKLFDVSTCRDVITWT 178
Query: 145 VMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTE 204
+I G VK G +EFAR LF++MP RN VSW+ +I GY M EAL LF +
Sbjct: 179 ALINGYVKSGHVEFARELFDQMPERNEVSWSAMITGYVHMGMFREALELFNDL-QLTGLR 237
Query: 205 PSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASK 264
P+ I+ L A G + + IH Y ++ G T D + L+D YAKCGCI A
Sbjct: 238 PNHAGIVGALTACSYLGSLDHGRWIHAYVDRNG-TELDRVLGTALVDMYAKCGCIEIACS 296
Query: 265 LFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHG 324
+FE + K+ ++TS+ISG A HG +A++ FGRMQ + PN VTF+ VL+ACS
Sbjct: 297 VFEKMP--DKDAFAFTSLISGLANHGQSADAIQLFGRMQSEKVIPNEVTFICVLSACSRM 354
Query: 325 GLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWR 384
GLV+EGL F+ M + P ++HYGC++D+LGRAG LE+A++ +P E D V
Sbjct: 355 GLVDEGLRIFNCMSVVYGIEPGVQHYGCMVDLLGRAGLLEEAKRLVREMPME-PDSYVLG 413
Query: 385 TLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERN 444
LL +C HG+VE+G+ ++E +GG +VL+ N+ A ++ ++R+ M +
Sbjct: 414 ALLNSCRVHGDVELGKETVESLVERGLDHGGVHVLLSNMYASSNQWDWVVKVRKEMGAKK 473
Query: 445 AFKVPGCS 452
KVPGCS
Sbjct: 474 VKKVPGCS 481
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 104/417 (24%), Positives = 175/417 (41%), Gaps = 85/417 (20%)
Query: 80 LIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYV--SLGFLKDSSKLFDEMPE 137
L+ C T+S Q+H+ + + + +++++ S + + KLF +P
Sbjct: 16 LLEQCRTMSQIK---QMHSHLIVSASRLDPFAAGKIISLFAVSSNADISHAYKLFLSLPH 72
Query: 138 RNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKM 197
R WN +I V+ E A SL++ M + G+ N + + +
Sbjct: 73 RTTFIWNTIIRIFVEKNENATALSLYKNM----------LQTGFLPNNYTFSFV-----L 117
Query: 198 VACEYTEPSEITILA-VLPAIWQNGDVKSCQLIHGYGE-------KRGF---TAFDIRVL 246
AC P + A V+ W++ D LIH Y ++ F T D+
Sbjct: 118 RACTDNSPVGLASHAQVIKLGWESYDFVLNGLIHLYANWSSVEAARKLFDVSTCRDVITW 177
Query: 247 NCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVG 306
LI+ Y K G + A +LF+ + +N VSW+++I+G+ GM +EA+E F +Q G
Sbjct: 178 TALINGYVKSGHVEFARELFDQMP--ERNEVSWSAMITGYVHMGMFREALELFNDLQLTG 235
Query: 307 LKPNRVTFLSVLNACS------HG-----------------------------GLVEEGL 331
L+PN + L ACS HG G +E
Sbjct: 236 LRPNHAGIVGALTACSYLGSLDHGRWIHAYVDRNGTELDRVLGTALVDMYAKCGCIEIAC 295
Query: 332 NFFDKMVEE-----CEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTL 386
+ F+KM ++ ++ + ++G D + GR+ Q+EK IP+E+T + V
Sbjct: 296 SVFEKMPDKDAFAFTSLISGLANHGQSADAIQLFGRM-QSEKV---IPNEVTFICV---- 347
Query: 387 LGACSFHGNVEMGERV---TRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVM 440
L ACS G V+ G R+ + +E G Y M ++L G +A+RL R M
Sbjct: 348 LSACSRMGLVDEGLRIFNCMSVVYGIEPGV-QHYGCMVDLLGRAGLLEEAKRLVREM 403
>gi|356537880|ref|XP_003537434.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Glycine max]
Length = 638
Score = 271 bits (693), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 153/440 (34%), Positives = 252/440 (57%), Gaps = 32/440 (7%)
Query: 34 FNTLLHFYSLAESPQK---AFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHP 90
+NT++ +LAE+ + A L++ Q+ S + + P + FT+ +++ CA ++
Sbjct: 83 WNTVIR--ALAETQDRHLDALLVFCQML-----SEATVEP--NQFTFPSVLKACAVMARL 133
Query: 91 NLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLF---------------DEM 135
G Q+H ++ K G +V T L+ MYV G ++D++ LF DE
Sbjct: 134 AEGKQVHGLLLKFGLVDDEFVVTNLLRMYVMCGSMEDANVLFYRNVEGVDDVRNLVRDER 193
Query: 136 -PERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALF 194
E N+V NVM+ G + G L+ AR LF+ M R+VVSW +I GY + EA+ +F
Sbjct: 194 GREFNVVLCNVMVDGYARVGNLKAARELFDRMAQRSVVSWNVMISGYAQNGFYKEAIEIF 253
Query: 195 RKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYA 254
+M+ P+ +T+++VLPAI + G ++ + +H Y EK D+ + + L+D YA
Sbjct: 254 HRMMQMGDVLPNRVTLVSVLPAISRLGVLELGKWVHLYAEKNKIRIDDV-LGSALVDMYA 312
Query: 255 KCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTF 314
KCG I A ++FE + + N+++W ++I G AMHG + RM+K G+ P+ VT+
Sbjct: 313 KCGSIEKAIQVFERLP--QNNVITWNAVIGGLAMHGKANDIFNYLSRMEKCGISPSDVTY 370
Query: 315 LSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIP 374
+++L+ACSH GLV+EG +FF+ MV + P I+HYGC++D+LGRAG LE+AE+ L +P
Sbjct: 371 IAILSACSHAGLVDEGRSFFNDMVNSVGLKPKIEHYGCMVDLLGRAGYLEEAEELILNMP 430
Query: 375 SEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAE 434
+ D V+W+ LLGA H N+++G R +++M G YV + N+ A G +
Sbjct: 431 MKPDD-VIWKALLGASKMHKNIKIGMRAAEVLMQMAPHDSGAYVALSNMYASSGNWDGVA 489
Query: 435 RLRRVMDERNAFKVPGCSLV 454
+R +M + + K PGCS +
Sbjct: 490 AVRLMMKDMDIRKDPGCSWI 509
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 87/334 (26%), Positives = 163/334 (48%), Gaps = 29/334 (8%)
Query: 81 IRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGF--LKDSSKLFDEMPER 138
I+ C ++ Q+HA + K G + T ++ + + F + + +FD++PER
Sbjct: 22 IKACKSMRELK---QVHAFLVKTGQTHDNAIATEILRLSATSDFRDIGYALSVFDQLPER 78
Query: 139 NLVTWNVMITGLVKWGE------LEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNE--- 189
N WN +I L + + L F + L E N ++ ++ M R E
Sbjct: 79 NCFAWNTVIRALAETQDRHLDALLVFCQMLSEATVEPNQFTFPSVLKACAVMARLAEGKQ 138
Query: 190 --ALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFT------AF 241
L L +V E+ + + + V+ ++ +V + + G + R F
Sbjct: 139 VHGLLLKFGLVDDEFV-VTNLLRMYVMCGSMEDANVLFYRNVEGVDDVRNLVRDERGREF 197
Query: 242 DIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGR 301
++ + N ++D YA+ G + +A +LF+ ++ ++++VSW +ISG+A +G KEA+E F R
Sbjct: 198 NVVLCNVMVDGYARVGNLKAARELFDRMA--QRSVVSWNVMISGYAQNGFYKEAIEIFHR 255
Query: 302 MQKVG-LKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRA 360
M ++G + PNRVT +SVL A S G++E G + E+ ++ D L+DM +
Sbjct: 256 MMQMGDVLPNRVTLVSVLPAISRLGVLELG-KWVHLYAEKNKIRIDDVLGSALVDMYAKC 314
Query: 361 GRLEQAEKTALGIPSEITDVVVWRTLLGACSFHG 394
G +E+A + +P +V+ W ++G + HG
Sbjct: 315 GSIEKAIQVFERLPQ--NNVITWNAVIGGLAMHG 346
>gi|147854977|emb|CAN80267.1| hypothetical protein VITISV_027683 [Vitis vinifera]
Length = 539
Score = 271 bits (693), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 140/384 (36%), Positives = 232/384 (60%), Gaps = 3/384 (0%)
Query: 71 LFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSK 130
L + +T+ F+ + C G Q+ K+G +S+++V A++ MY + G + ++ +
Sbjct: 29 LPNRYTFVFVFKACGNGLGVLEGEQIRVHAIKIGLESNLFVTNAMIRMYANWGLVDEARR 88
Query: 131 LFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEA 190
+FD +++L +WN+MI G V GE+ A+ +F+EM R+VVSWT II GY ++ EA
Sbjct: 89 VFDWSLDQDLYSWNIMIGGYVGSGEIGRAKEMFDEMSERDVVSWTTIIAGYVQVGCFKEA 148
Query: 191 LALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLI 250
L LF +M+ P+E T+ + L A + + IH Y +K + R+L L+
Sbjct: 149 LDLFHEMLQTG-PPPNEFTLASALAACANLVALDQGRWIHVYIDKSEIK-MNERLLASLL 206
Query: 251 DTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPN 310
D YAKCG I A+K+F D + + W ++I G+AMHG KEA++ F +M+ + PN
Sbjct: 207 DMYAKCGEIDFAAKVFHDEYGLKLKVWPWNAMIGGYAMHGKSKEAIDLFEQMKVEKVSPN 266
Query: 311 RVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTA 370
+VTF+++LNACSHG LVEEG +F M + P+I+HYGC++D+LGR+G L++AE+T
Sbjct: 267 KVTFVALLNACSHGKLVEEGRGYFKSMASSYGIEPEIEHYGCMVDLLGRSGLLKEAEETV 326
Query: 371 LGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRF 430
+P D +W LLGAC H ++E G+R+ + I E++ + G +VL+ N+ + G++
Sbjct: 327 FNMPMA-PDATIWGALLGACRIHKDIERGQRIGKIIKELDSDHIGCHVLLANLYSASGQW 385
Query: 431 GDAERLRRVMDERNAFKVPGCSLV 454
+A+ +R+ ++ K PGCS +
Sbjct: 386 DEAKAVRQKIEVSGRKKTPGCSSI 409
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 65/143 (45%), Gaps = 8/143 (5%)
Query: 69 PPLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDS 128
PP + FT + + CA L + G +H I K + + + +L++MY G + +
Sbjct: 161 PP--NEFTLASALAACANLVALDQGRWIHVYIDKSEIKMNERLLASLLDMYAKCGEIDFA 218
Query: 129 SKLF-DEMPER-NLVTWNVMITGLVKWGELEFARSLFEEMPCRNV----VSWTGIIDGYT 182
+K+F DE + + WN MI G G+ + A LFE+M V V++ +++ +
Sbjct: 219 AKVFHDEYGLKLKVWPWNAMIGGYAMHGKSKEAIDLFEQMKVEKVSPNKVTFVALLNACS 278
Query: 183 RMNRSNEALALFRKMVACEYTEP 205
E F+ M + EP
Sbjct: 279 HGKLVEEGRGYFKSMASSYGIEP 301
>gi|326530063|dbj|BAK08311.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 490
Score = 271 bits (693), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 147/382 (38%), Positives = 226/382 (59%), Gaps = 7/382 (1%)
Query: 75 FTYSFLIRTCATLSHPNLGTQLHAVISKVGFQS-HVYVNTALVNMYVSLGFLKDSSKLFD 133
T+ FL R A L+ P L LHA ++G +YV +LV+MY + + +LFD
Sbjct: 61 LTFPFLGRAAARLASPRLALSLHAHPLRLGLLPWDLYVANSLVHMYAACALPDLARRLFD 120
Query: 134 EMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALAL 193
E+P NLV+WN ++ G K +L AR +F MP R+VVSW+ +IDG + EALAL
Sbjct: 121 EIPRPNLVSWNALLDGYAKCRDLLSARCVFNRMPQRDVVSWSAMIDGCVKCGEHREALAL 180
Query: 194 FRKMVAC---EYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLI 250
F M A +++T+++VL A GD+ + +H Y ++ GF ++R+ L+
Sbjct: 181 FEMMEAAGAGNGVRANDVTMVSVLGACAHLGDLGRGRQMHRYLQEHGFL-LNLRLATSLV 239
Query: 251 DTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPN 310
D YAKCG I A ++F + V +++ W ++I G A+HG+ E+VE F MQ G+ P+
Sbjct: 240 DMYAKCGAISEALEVFRAVPVTTTDVLIWNAVIGGLAVHGLSMESVEIFQEMQNSGVVPD 299
Query: 311 RVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTA 370
+T+L +L+AC HGGLV E F + +E + P ++HY CL+D+LGRAG LE+A
Sbjct: 300 EITYLVLLSACVHGGLVGEAWRLF-RSLEVQGLRPHVEHYACLVDVLGRAGHLEEAYGVV 358
Query: 371 LGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRF 430
+P E +V V LL AC HG VE+GE V R++++++ + G Y+ + NI A R+
Sbjct: 359 KSMPME-PNVSVLGALLNACHLHGWVELGEVVGRQLVQLQPDHDGRYIGLSNIYAIARRW 417
Query: 431 GDAERLRRVMDERNAFKVPGCS 452
+A++ R+VM+ER K+PG S
Sbjct: 418 QEAKKARKVMEERGVKKIPGFS 439
>gi|357119550|ref|XP_003561500.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Brachypodium distachyon]
Length = 892
Score = 271 bits (693), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 154/405 (38%), Positives = 226/405 (55%), Gaps = 20/405 (4%)
Query: 63 HSHS------PLPPLFDSFTYSFLIRTCATLSHP-------NLGTQLHAVISKVGFQSHV 109
H+HS P L L+ T TLS + G LH K+
Sbjct: 362 HAHSSRGHRLPALALLSDMLAQGLLPTAHTLSASLPACRGLSPGRALHGYAFKLALAGDS 421
Query: 110 YVNTALVNMYVSLGFLKDSSKLFDEM-PERNLVTWNVMITGLVKWGELEFARSLFEEMPC 168
YV TAL+ MY G + LFD+M P+ ++V+ M+T G L+ ARSLF+ +P
Sbjct: 422 YVATALLGMYARAGDATAARALFDDMLPDPHVVSVTAMLTCYADMGALDDARSLFDGLPT 481
Query: 169 RNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQL 228
++ V W +IDGYT+ R NEAL LFR+M+ EP E+T++ VL A+ Q G V+S +
Sbjct: 482 KDFVCWNAMIDGYTQHGRPNEALRLFRRMLGSG-VEPDEVTVVLVLSAVAQLGTVESGKW 540
Query: 229 IHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAM 288
+H Y + +RV LID Y KCG + A +F I K++V W ++I+G+AM
Sbjct: 541 LHSYVKNSRRVQLSVRVGTALIDMYCKCGSLGDAVDVFHGIG--DKDIVVWNAMINGYAM 598
Query: 289 HGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIK 348
HG ++A+E F + ++ GL P +TF+ +LNACSH G+VEEG FF M E + P I+
Sbjct: 599 HGDSRKALEMFVQSREQGLWPTDITFIGLLNACSHSGMVEEGREFFQSMEREYGIDPKIE 658
Query: 349 HYGCLIDMLGRAGRLEQAEKTALGIPSEIT-DVVVWRTLLGACSFHGNVEMGERVTRKIL 407
HYGC++D+LGRAG +++A L +IT D V+W +LL AC H N+ +G+++ ++
Sbjct: 659 HYGCMVDLLGRAGLIKEA--FCLVQSMKITPDAVMWVSLLAACRLHKNMSLGQQIADYLV 716
Query: 408 EMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCS 452
G Y+L+ NI A VG +G+ R+R +M K PGCS
Sbjct: 717 AKGLANSGMYILLSNIYAAVGNWGEVARVRSMMKASGIQKEPGCS 761
>gi|413934265|gb|AFW68816.1| hypothetical protein ZEAMMB73_462632 [Zea mays]
Length = 648
Score = 271 bits (692), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 151/421 (35%), Positives = 238/421 (56%), Gaps = 11/421 (2%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+NTL+ Y + P++A L+ +L + + + P D T + CA + LG
Sbjct: 190 WNTLIGGYVRSGLPREALELFWRLAE----DGNAVRP--DEVTVIGAVSGCAQMGDLELG 243
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
+LH + G + V + A+++MYV G L+ ++ +F+ + R V+W MI G +
Sbjct: 244 KRLHEFVDNKGVRCTVRLMNAVMDMYVKCGSLELANSVFERISNRTAVSWTTMIVGHARL 303
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
G +E AR LF+EMP R+V W ++ GY + + EA+ALF +M + +P+EIT++ +
Sbjct: 304 GMMEDARMLFDEMPERDVFPWNALMAGYVQNKQGKEAIALFHEMQKSK-VDPNEITMVNL 362
Query: 214 LPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVER 273
L A Q G ++ +H Y ++ + + L+D YAKCG I A +F +I V+
Sbjct: 363 LSACSQLGALEMGMWVHHYIDRHKLH-LSVALGTSLVDMYAKCGNIKKAICVFNEIPVQ- 420
Query: 274 KNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNF 333
N ++WTS+I G A HG EA+E F RM +GL+P+ +TF+ VL+AC H GLVE G F
Sbjct: 421 -NALTWTSMICGLANHGHADEAIEYFQRMIDLGLQPDEITFIGVLSACCHAGLVEAGRQF 479
Query: 334 FDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFH 393
F M + + +KHY C+ID+LGRAG L++AE+ +P + D VVW L AC H
Sbjct: 480 FSLMHAKYHLERKMKHYSCMIDLLGRAGHLDEAEQLVNAMPMD-PDAVVWGALFFACRMH 538
Query: 394 GNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSL 453
GN+ +GE+ K++E++ G YVL+ N+ A A+++R +M KVPGCS
Sbjct: 539 GNITLGEKAAMKLVELDPSDSGIYVLLANMYAEANMRKKADKVRVMMRHLGVEKVPGCSC 598
Query: 454 V 454
+
Sbjct: 599 I 599
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 109/418 (26%), Positives = 189/418 (45%), Gaps = 78/418 (18%)
Query: 53 LYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVN 112
LY+ L HS S P D T+ FLI+ CA L + + G + + K+GF + V+V
Sbjct: 107 LYRAL----LHSGSARP---DHLTFPFLIKACARLQYRSYGAAVLGHVQKLGFSADVFVV 159
Query: 113 TALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVV 172
A ++ W+V G + FAR LF+E P R+VV
Sbjct: 160 NAAMHF------------------------WSVR-------GPMAFARRLFDESPVRDVV 188
Query: 173 SWTGIIDGYTRMNRSNEALALFRKMVA-CEYTEPSEITILAVLPAIWQNGDVKSCQLIHG 231
SW +I GY R EAL LF ++ P E+T++ + Q GD++ + +H
Sbjct: 189 SWNTLIGGYVRSGLPREALELFWRLAEDGNAVRPDEVTVIGAVSGCAQMGDLELGKRLHE 248
Query: 232 YGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGM 291
+ + +G +R++N ++D Y KCG + A+ +FE IS + VSWT++I G A GM
Sbjct: 249 FVDNKGVRC-TVRLMNAVMDMYVKCGSLELANSVFERIS--NRTAVSWTTMIVGHARLGM 305
Query: 292 -------------------------------GKEAVENFGRMQKVGLKPNRVTFLSVLNA 320
GKEA+ F MQK + PN +T +++L+A
Sbjct: 306 MEDARMLFDEMPERDVFPWNALMAGYVQNKQGKEAIALFHEMQKSKVDPNEITMVNLLSA 365
Query: 321 CSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDV 380
CS G +E G+ + ++ ++ + L+DM + G +++A IP + +
Sbjct: 366 CSQLGALEMGM-WVHHYIDRHKLHLSVALGTSLVDMYAKCGNIKKAICVFNEIP--VQNA 422
Query: 381 VVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRR 438
+ W +++ + HG+ + ++++++ G D + +L+ G E R+
Sbjct: 423 LTWTSMICGLANHGHADEAIEYFQRMIDL--GLQPDEITFIGVLSACCHAGLVEAGRQ 478
>gi|357486999|ref|XP_003613787.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355515122|gb|AES96745.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 586
Score = 271 bits (692), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 159/456 (34%), Positives = 248/456 (54%), Gaps = 53/456 (11%)
Query: 3 ILQNSQTPNNITTQIHSHLLTTN----SLLHHSQLFNTLLHFYSLAESPQKAFLLYKQLQ 58
I N Q N+ T+ + T+N S+ H QLF+ + Q +L+ +
Sbjct: 50 IKTNYQNNTNVITKF-INFCTSNPTKASMEHAHQLFDQI---------TQPNIVLFNTMA 99
Query: 59 QIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNM 118
+ Y + PL + + +R + + G QLH K+G ++YV L+NM
Sbjct: 100 RGYARLNDPLRMITH---FRRCLRLVSKVKALAEGKQLHCFAVKLGVSDNMYVVPTLINM 156
Query: 119 YVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGII 178
Y + G + S ++FD++ E PC VV++ II
Sbjct: 157 YTACGDIDASRRVFDKIDE-----------------------------PC--VVAYNAII 185
Query: 179 DGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGF 238
R NR+NEALALFR++ +P+++T+L VL + G + + +H Y +K GF
Sbjct: 186 MSLARNNRANEALALFRELQEIGL-KPTDVTMLVVLSSCALLGSLDLGRWMHEYVKKYGF 244
Query: 239 TAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVEN 298
+ ++V LID YAKCG + A +F D+ +++ +W++II +A HG G +A+
Sbjct: 245 DRY-VKVNTTLIDMYAKCGSLDDAVNVFRDMP--KRDTQAWSAIIVAYATHGDGFQAISM 301
Query: 299 FGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLG 358
M+K ++P+ +TFL +L ACSH GLVEEG +F M E ++P IKHYGC++D+LG
Sbjct: 302 LNEMKKEKVQPDEITFLGILYACSHNGLVEEGFEYFHGMTNEYGIVPSIKHYGCMVDLLG 361
Query: 359 RAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYV 418
RAGRL++A K +P + T ++WRTLL ACS HGNVEMG+RV +I E++ +GGDYV
Sbjct: 362 RAGRLDEAYKFIDELPIKPTP-ILWRTLLSACSTHGNVEMGKRVIERIFELDDSHGGDYV 420
Query: 419 LMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
+ N+ A G++ D LR+ M ++ A K+PGCS +
Sbjct: 421 IFSNLCARYGKWDDVNHLRKTMIDKGAVKIPGCSSI 456
>gi|297814598|ref|XP_002875182.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321020|gb|EFH51441.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 605
Score = 271 bits (692), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 153/422 (36%), Positives = 239/422 (56%), Gaps = 44/422 (10%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNL 92
+FN++ YS + +P + F L+ ++ + LP D++T+ L++ CA
Sbjct: 98 IFNSIARGYSRSTNPLEVFNLFVEILE-----DDLLP---DNYTFPSLLKACAVAKALEE 149
Query: 93 GTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVK 152
G QLH + K+G +VYV L+NMY + + +FD + E
Sbjct: 150 GRQLHCLSMKLGVDDNVYVCPTLINMYTECEDVDAARCVFDRIVE--------------- 194
Query: 153 WGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILA 212
PC VV + +I GY R NR NEAL+LFR+M + +P+EIT+L+
Sbjct: 195 --------------PC--VVCYNAMITGYARRNRPNEALSLFREMQG-KNLKPNEITLLS 237
Query: 213 VLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVE 272
VL + G + + IH Y +K GF + ++V LID +AKCG + A +FE++
Sbjct: 238 VLSSCALLGSLDLGKWIHEYAKKHGFCKY-VKVNTALIDMFAKCGSLDDAVSIFENMRY- 295
Query: 273 RKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLN 332
K+ +W+++I +A HG + ++ F RM+ ++P+ +TFL +LNACSH GLVEEG
Sbjct: 296 -KDTQAWSAMIVAYANHGQAENSMLMFERMRSENVQPDEITFLGLLNACSHTGLVEEGRE 354
Query: 333 FFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSF 392
+F MV E ++P IKHYG ++D+LGRAG LE A + +P T ++WR LL ACS
Sbjct: 355 YFSWMVHEFGIVPSIKHYGSMVDLLGRAGHLEDAYEFIDKLPISPTP-MLWRILLAACSS 413
Query: 393 HGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCS 452
H N+E+ E+V+ +ILE++ +GGDYV++ N+ A ++ + LR+VM +R A KVPGCS
Sbjct: 414 HNNLELAEKVSERILELDDSHGGDYVILSNLYARNKKWEAVDSLRKVMKDRKAVKVPGCS 473
Query: 453 LV 454
+
Sbjct: 474 SI 475
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 70/249 (28%), Positives = 119/249 (47%), Gaps = 21/249 (8%)
Query: 156 LEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACE-----YTEPSEITI 210
+ +AR LF+ M ++V + I GY+R E LF +++ + YT PS +
Sbjct: 81 MSYARHLFDAMSEPDIVIFNSIARGYSRSTNPLEVFNLFVEILEDDLLPDNYTFPSLLKA 140
Query: 211 LAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDIS 270
AV A+ + + +H K G ++ V LI+ Y +C + +A +F+ I
Sbjct: 141 CAVAKALEEG------RQLHCLSMKLGVDD-NVYVCPTLINMYTECEDVDAARCVFDRI- 192
Query: 271 VERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEG 330
VE +V + ++I+G+A EA+ F MQ LKPN +T LSVL++C+ G ++ G
Sbjct: 193 VE-PCVVCYNAMITGYARRNRPNEALSLFREMQGKNLKPNEITLLSVLSSCALLGSLDLG 251
Query: 331 --LNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLG 388
++ + K C+ +K LIDM + G L+ A ++ D W ++
Sbjct: 252 KWIHEYAKKHGFCKY---VKVNTALIDMFAKCGSLDDA--VSIFENMRYKDTQAWSAMIV 306
Query: 389 ACSFHGNVE 397
A + HG E
Sbjct: 307 AYANHGQAE 315
>gi|297846320|ref|XP_002891041.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336883|gb|EFH67300.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 586
Score = 271 bits (692), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 142/389 (36%), Positives = 235/389 (60%), Gaps = 8/389 (2%)
Query: 70 PLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVS-LGFLKDS 128
P + F Y ++++ LS +H + K GF +V V TAL++ Y S + + +
Sbjct: 122 PRPNHFIYPLVLKSTPYLSSAFSTPLVHTHLFKSGFHLYVVVQTALLHSYASSVSHITLA 181
Query: 129 SKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSN 188
+LFDEM ERN+V+W M++G + G++ A +LFEEMP R+V SW I+ T+
Sbjct: 182 RQLFDEMSERNVVSWTAMLSGYARSGDIFNAVALFEEMPERDVPSWNAILAACTQNGLFV 241
Query: 189 EALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNC 248
EA++LFR+M+ P+E+T++ VL A Q G ++ + IH + +R ++ D+ V N
Sbjct: 242 EAVSLFRRMINDPCIRPNEVTLVCVLSACAQTGTLQLAKGIHAFAYRRNLSS-DVFVSNS 300
Query: 249 LIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVG-- 306
L+D Y KCG + AS +F+ S +K+L +W S+I+ FA+HG +EA+ F M K+
Sbjct: 301 LVDLYGKCGNLEEASSVFKMSS--KKSLTAWNSMINCFALHGRSEEAIAVFEDMMKLNSH 358
Query: 307 -LKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQ 365
+KP+ +TF+ +LNAC+HGGLV +G +FD M + + P I+HYGCLID+LGRAG+ ++
Sbjct: 359 DIKPDHITFIGLLNACTHGGLVSKGRGYFDLMKKRFGIEPRIEHYGCLIDLLGRAGQFDE 418
Query: 366 AEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILA 425
A +T + E D +W +LL AC +G++++ E + ++ + GG +M N+
Sbjct: 419 ALETMSTMKME-ADEAIWGSLLNACKKYGHLDLAEVAVKNLVALNPNNGGYVAMMANLYG 477
Query: 426 GVGRFGDAERLRRVMDERNAFKVPGCSLV 454
+G + +A R R+++ +NA+K PG S +
Sbjct: 478 EMGNWEEARRARKMIKHQNAYKPPGWSQI 506
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/290 (22%), Positives = 125/290 (43%), Gaps = 43/290 (14%)
Query: 156 LEFARSLFEEMPCRNVVSWTGIIDGYTRMN--RSNEALALFRKMVACEYTEPSEITILAV 213
L +AR +F+ N + ++ GY+ ++ A + FR MV + P+ V
Sbjct: 73 LSYARFIFDRFSFPNTHLYAAVLTGYSSSLPLHASSAFSFFRLMVNRSFPRPNHFIYPLV 132
Query: 214 LPAIWQNGDVKSCQLIHGYGEKRGFTAF-------------------------------D 242
L + S L+H + K GF + +
Sbjct: 133 LKSTPYLSSAFSTPLVHTHLFKSGFHLYVVVQTALLHSYASSVSHITLARQLFDEMSERN 192
Query: 243 IRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRM 302
+ ++ YA+ G IF+A LFE++ +++ SW +I++ +G+ EAV F RM
Sbjct: 193 VVSWTAMLSGYARSGDIFNAVALFEEM--PERDVPSWNAILAACTQNGLFVEAVSLFRRM 250
Query: 303 -QKVGLKPNRVTFLSVLNACSHGGLVE--EGLNFFDKMVEECEVLPDIKHYGCLIDMLGR 359
++PN VT + VL+AC+ G ++ +G++ F + D+ L+D+ G+
Sbjct: 251 INDPCIRPNEVTLVCVLSACAQTGTLQLAKGIHAF---AYRRNLSSDVFVSNSLVDLYGK 307
Query: 360 AGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEM 409
G LE+A +++ S + W +++ + HG E V ++++
Sbjct: 308 CGNLEEA--SSVFKMSSKKSLTAWNSMINCFALHGRSEEAIAVFEDMMKL 355
>gi|125532120|gb|EAY78685.1| hypothetical protein OsI_33787 [Oryza sativa Indica Group]
Length = 493
Score = 271 bits (692), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 146/383 (38%), Positives = 231/383 (60%), Gaps = 8/383 (2%)
Query: 75 FTYSFLIRTCATLSHPNLGTQLHAVISKVGF-QSHVYVNTALVNMYVSLGFLKDSSKLFD 133
T+ FL R A L+ P L +HA + G ++V+ +LV+MY + + +LFD
Sbjct: 63 LTFPFLARAAARLASPRLARAVHAQPLRRGLLPQDLHVSNSLVHMYAACALPGLARRLFD 122
Query: 134 EMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALAL 193
E+P N V+WN ++ G K +L AR +F MP R+VVSW+ +IDG + EALA+
Sbjct: 123 EIPRPNHVSWNALLDGYAKCRDLPAARRVFARMPQRDVVSWSAMIDGCVKCGEHREALAV 182
Query: 194 FRKMVAC----EYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCL 249
F M A + +++T+++VL A GD+ + +H Y E+ GF +IR+ L
Sbjct: 183 FEMMEATAARHDGVRANDVTMVSVLGACAHLGDLVRGRKMHRYLEEHGFP-LNIRLATSL 241
Query: 250 IDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKP 309
+D YAKCG I A ++F + VE +++ W ++I G A+HGM +E+++ F +M+ G+ P
Sbjct: 242 VDMYAKCGAIVEALEVFHAVPVESTDVLIWNAVIGGLAVHGMSRESLQMFQKMEHAGVVP 301
Query: 310 NRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKT 369
+ +T+L +L+AC HGGLV+E FF + +E + P ++HY CL+D+LGRAGRLE+A
Sbjct: 302 DEITYLCLLSACVHGGLVDEAWRFF-RSLEAQRLRPHVEHYACLVDVLGRAGRLEEAYGV 360
Query: 370 ALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGR 429
+P + + V V LL AC HG VE+GE V R+++ ++ + G Y+ + NI A R
Sbjct: 361 VKSMPMKPS-VSVLGALLNACHIHGWVELGEAVGRQLVHLQPDHDGRYIGLSNIYAVARR 419
Query: 430 FGDAERLRRVMDERNAFKVPGCS 452
+ +A++ R+VM+ER KVPG S
Sbjct: 420 WQEAKKARKVMEERGVKKVPGFS 442
>gi|449436619|ref|XP_004136090.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Cucumis sativus]
Length = 723
Score = 271 bits (692), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 134/381 (35%), Positives = 227/381 (59%), Gaps = 5/381 (1%)
Query: 74 SFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFD 133
+ T ++ C+ L G ++H+ + +S++ + A+++MY G + + +F
Sbjct: 219 TVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVESNLVLENAMIDMYADCGEMDSALGIFR 278
Query: 134 EMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALAL 193
M R++++W +++G GE++ AR+ F++MP ++ VSWT +IDGY R NR EAL L
Sbjct: 279 SMNNRDIISWTTIVSGFTNLGEIDVARNYFDKMPEKDYVSWTAMIDGYIRSNRFKEALEL 338
Query: 194 FRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTY 253
FR M A +P E T+++VL A G ++ + I Y + R D+ V N LID Y
Sbjct: 339 FRNMQATN-VKPDEFTMVSVLTACAHLGALELGEWIRTYID-RNKIKNDLFVRNALIDMY 396
Query: 254 AKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVT 313
KCG + A +F ++S +++ +WT++I G A++G G++A++ F M K + P+ +T
Sbjct: 397 FKCGDVDKAESIFREMS--QRDKFTWTAMIVGLAVNGHGEKALDMFSNMLKASILPDEIT 454
Query: 314 FLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGI 373
++ VL+AC+H GLV++G +F +M + + P+I HYGCL+D+L RAGRL++A + +
Sbjct: 455 YIGVLSACTHTGLVDKGRKYFLRMTSQHGIEPNIAHYGCLVDLLARAGRLKEAYEVIENM 514
Query: 374 PSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDA 433
P + + +VW LL C + +M E V ++ILE+E G YVL+ NI A R+ D
Sbjct: 515 PIK-ANSIVWGALLAGCRVYRESDMAEMVVKQILELEPDNGAVYVLLCNIYAACKRWNDL 573
Query: 434 ERLRRVMDERNAFKVPGCSLV 454
LR++M ++ K PGCSL+
Sbjct: 574 RELRQMMMDKGIKKTPGCSLI 594
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 120/468 (25%), Positives = 201/468 (42%), Gaps = 112/468 (23%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNL 92
++NT++ YS + PQ LY ++ + + P D +T+ FL +
Sbjct: 85 IWNTMIRGYSRLDFPQLGVSLYLEMLR------RGVKP--DRYTFPFLFKGFTRDIALEY 136
Query: 93 GTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVK 152
G QLH + K G Q +V+V+TALV MY+ G L + +FD P+ +++TWN++I+ K
Sbjct: 137 GRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWNMIISAYNK 196
Query: 153 WGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILA 212
G+ E +R LF M + V+ P+ +T++
Sbjct: 197 VGKFEESRRLFLVMEDKQVL--------------------------------PTTVTLVL 224
Query: 213 VLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFE----- 267
VL A + D+++ + +H Y K ++ + N +ID YA CG + SA +F
Sbjct: 225 VLSACSKLKDLRTGKKVHSY-VKNCKVESNLVLENAMIDMYADCGEMDSALGIFRSMNNR 283
Query: 268 ----------------DISVER--------KNLVSWTSIISGFAMHGMGKEAVENFGRMQ 303
+I V R K+ VSWT++I G+ KEA+E F MQ
Sbjct: 284 DIISWTTIVSGFTNLGEIDVARNYFDKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQ 343
Query: 304 KVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRL 363
+KP+ T +SVL AC+H G +E G + ++ ++ D+ LIDM + G +
Sbjct: 344 ATNVKPDEFTMVSVLTACAHLGALELG-EWIRTYIDRNKIKNDLFVRNALIDMYFKCGDV 402
Query: 364 EQAEK-------------TALGI--------------------PSEITDVVVWRTLLGAC 390
++AE TA+ + S + D + + +L AC
Sbjct: 403 DKAESIFREMSQRDKFTWTAMIVGLAVNGHGEKALDMFSNMLKASILPDEITYIGVLSAC 462
Query: 391 SFHGNVEMGERVTRKILEMERGYG-----GDYVLMYNILAGVGRFGDA 433
+ G V+ G + L M +G Y + ++LA GR +A
Sbjct: 463 THTGLVDKGRKY---FLRMTSQHGIEPNIAHYGCLVDLLARAGRLKEA 507
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/298 (24%), Positives = 141/298 (47%), Gaps = 20/298 (6%)
Query: 152 KWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITIL 211
++G+ ++AR LF+E+P N+ W +I GY+R++ ++L+ +M+ +P T
Sbjct: 64 EYGDFQYARRLFDEIPEPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLR-RGVKPDRYTFP 122
Query: 212 AVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISV 271
+ ++ ++ + +HG+ K G +++ V L+ Y CG + +A +F+
Sbjct: 123 FLFKGFTRDIALEYGRQLHGHVLKHGLQ-YNVFVHTALVQMYLLCGQLDTARGVFD--VC 179
Query: 272 ERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGL 331
+ ++++W IIS + G +E+ F M+ + P VT + VL+ACS + G
Sbjct: 180 PKADVITWNMIISAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGK 239
Query: 332 NFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEIT--DVVVWRTLLGA 389
V+ C+V ++ +IDM G ++ +ALGI + D++ W T++
Sbjct: 240 KVH-SYVKNCKVESNLVLENAMIDMYADCGEMD----SALGIFRSMNNRDIISWTTIVSG 294
Query: 390 CSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGV---GRFGDAERLRRVMDERN 444
+ G +++ K+ E DYV ++ G RF +A L R M N
Sbjct: 295 FTNLGEIDVARNYFDKMPE------KDYVSWTAMIDGYIRSNRFKEALELFRNMQATN 346
>gi|359491588|ref|XP_002281032.2| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g61800 [Vitis vinifera]
Length = 576
Score = 271 bits (692), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 146/422 (34%), Positives = 242/422 (57%), Gaps = 14/422 (3%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+NT++ ++L SP A +++ +++++ +PP D+ T+ F ++ C+ L +L
Sbjct: 97 YNTMIRAHTLLSSPLAALVIFVRMRRL------SVPP--DTHTFPFCLKACSLLPALSLA 148
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
LH+ K GF + ++V L+++Y L + ++F+E +++V++N +I G +K
Sbjct: 149 QTLHSQAFKFGFGADLFVCNTLIHVYSVNKHLHHACQVFNETSLKDVVSYNALIGGFIKV 208
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRM-NRSNEALALFRKMVACEYTEPSEITILA 212
G+ + AR LF++MP R+ VSW ++ GY + + +A+ LF +M+ P I +++
Sbjct: 209 GDTDRARRLFDKMPIRDAVSWGTLLAGYAQSGDLCMDAIQLFNRML-ISTVRPDNIALVS 267
Query: 213 VLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVE 272
L A Q G+++ + IH Y K+ + + L+D YAKCGCI +A ++FE S
Sbjct: 268 ALSACAQLGELEQGKSIHVY-IKQNRIPINAFLSTGLVDLYAKCGCIETAREIFE--SSP 324
Query: 273 RKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLN 332
KNL +W +++ G MHG G ++ F RM + G+KP+ V+FL +L C H GLV E N
Sbjct: 325 DKNLFTWNALLVGLGMHGRGHLSLHYFSRMIEAGIKPDGVSFLGILVGCGHAGLVCEARN 384
Query: 333 FFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSF 392
FF +M V ++KHYGC+ D+LGRAG + +A + +P DV VW +LG C
Sbjct: 385 FFQEMEVVYRVPRELKHYGCMADLLGRAGLIREAMEMIERMPMG-GDVFVWGGVLGGCRI 443
Query: 393 HGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCS 452
HGNVE+ E+ ++ + G Y +M +I A GR+ D R+RR+M R K PGCS
Sbjct: 444 HGNVEIAEKAAENVMALNPEDDGVYSIMADIYANAGRWEDVARIRRLMHSRQVKKNPGCS 503
Query: 453 LV 454
LV
Sbjct: 504 LV 505
>gi|449442481|ref|XP_004139010.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g04840-like [Cucumis sativus]
gi|449505311|ref|XP_004162432.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g04840-like [Cucumis sativus]
Length = 679
Score = 271 bits (692), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 156/418 (37%), Positives = 234/418 (55%), Gaps = 42/418 (10%)
Query: 73 DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVS----------- 121
D T+ F++++ A LS+ +G LH I K G + +V +LV+MYV
Sbjct: 139 DRLTFPFVLKSAAALSNGGVGRALHCGILKFGLEFDSFVRVSLVDMYVKVEELGSALKVF 198
Query: 122 ------------------------LGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELE 157
+G L +++LFD MP+++ +WN +I G +K G++
Sbjct: 199 DESPESVKNGSVLIWNVLIHGYCRMGDLVKATELFDSMPKKDTGSWNSLINGFMKMGDMG 258
Query: 158 FARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAI 217
A+ LF +MP +NVVSWT +++G+++ +AL F M+ E P++ TI++ L A
Sbjct: 259 RAKELFVKMPEKNVVSWTTMVNGFSQNGDPEKALETFFCMLE-EGARPNDYTIVSALSAC 317
Query: 218 WQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLV 277
+ G + + IH Y GF ++ + L+D YAKCG I A K+F + + K L+
Sbjct: 318 AKIGALDAGLRIHNYLSGNGFK-LNLVIGTALVDMYAKCGNIEHAEKVFHE--TKEKGLL 374
Query: 278 SWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKM 337
W+ +I G+A+HG ++A++ F M+ G KP+ V FL+VLNACSH G V EGL FFD M
Sbjct: 375 IWSVMIWGWAIHGHFRKALQYFEWMKFTGTKPDSVVFLAVLNACSHSGQVNEGLKFFDNM 434
Query: 338 VEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEIT-DVVVWRTLLGACSFHGNV 396
+ P +KHY ++DMLGRAGRL++A K +P IT D VVW L AC H NV
Sbjct: 435 RRGYLIEPSMKHYTLVVDMLGRAGRLDEALKFIRAMP--ITPDFVVWGALFCACRTHKNV 492
Query: 397 EMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
EM E ++K+L++E + G YV + N A VGR+ DAER+R M + A K PG S +
Sbjct: 493 EMAELASKKLLQLEPKHPGSYVFLSNAYASVGRWDDAERVRVSMRDHGAHKDPGWSFI 550
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 81/177 (45%), Gaps = 12/177 (6%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+ T+++ +S P+KA L+ + P + +T + CA + + G
Sbjct: 275 WTTMVNGFSQNGDPEKA------LETFFCMLEEGARP--NDYTIVSALSACAKIGALDAG 326
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
++H +S GF+ ++ + TALV+MY G ++ + K+F E E+ L+ W+VMI G
Sbjct: 327 LRIHNYLSGNGFKLNLVIGTALVDMYAKCGNIEHAEKVFHETKEKGLLIWSVMIWGWAIH 386
Query: 154 GELEFARSLFEEMPCR----NVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPS 206
G A FE M + V + +++ + + NE L F M EPS
Sbjct: 387 GHFRKALQYFEWMKFTGTKPDSVVFLAVLNACSHSGQVNEGLKFFDNMRRGYLIEPS 443
Score = 42.7 bits (99), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 88/216 (40%), Gaps = 34/216 (15%)
Query: 244 RVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQ 303
RV+ I + + + A +F+ E KN + ++I G A + + ++ F M
Sbjct: 75 RVVTQFISSCSSLNSVDYAISIFQRF--ELKNSYLFNALIRGLAENSRFESSISFFVLML 132
Query: 304 KVGLKPNRVTFLSVLNACS-----------HGGLVEEGLNFFDKMVEECEVLPDIKHYGC 352
K + P+R+TF VL + + H G+++ GL FD V
Sbjct: 133 KWKISPDRLTFPFVLKSAAALSNGGVGRALHCGILKFGLE-FDSFVRV-----------S 180
Query: 353 LIDMLGRAGRLEQAEKTALGIPSEITD--VVVWRTLLGACSFHGNVEMGE--RVTRKILE 408
L+DM + L A K P + + V++W L+ HG MG+ + T
Sbjct: 181 LVDMYVKVEELGSALKVFDESPESVKNGSVLIWNVLI-----HGYCRMGDLVKATELFDS 235
Query: 409 MERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERN 444
M + G + + N +G G A+ L M E+N
Sbjct: 236 MPKKDTGSWNSLINGFMKMGDMGRAKELFVKMPEKN 271
>gi|224091939|ref|XP_002309408.1| predicted protein [Populus trichocarpa]
gi|222855384|gb|EEE92931.1| predicted protein [Populus trichocarpa]
Length = 547
Score = 270 bits (691), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 168/507 (33%), Positives = 248/507 (48%), Gaps = 76/507 (14%)
Query: 12 NITTQIHSHLLTTNSLLHHSQ-LFNTLLHFYSLAESPQKAF-LLYKQLQQIYTHSHSPLP 69
+I+T + N LL+ S L+N LL +S F L Y+ Q Y
Sbjct: 49 SISTSVSYSTSIFNRLLNPSTFLYNILLKIFSKNSQFIDTFSLFYRMKQSEYA------- 101
Query: 70 PLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVN----------------- 112
L D +TY LI+ C+ G +H + G VYV
Sbjct: 102 -LSDKYTYPLLIKVCSNELRLKEGEIVHGSAIRCGVSDDVYVGSSLISFYGKCKEILSAR 160
Query: 113 --------------TALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEF 158
TA+V Y S+G L+++ ++F+ MPERNL +WN MI+GL K G+L
Sbjct: 161 KVFDEIPERNVVSWTAMVAGYASVGDLENAKRVFERMPERNLPSWNAMISGLGKAGDLSG 220
Query: 159 ARSLFEEM-------------------------------PCRNVVSWTGIIDGYTRMNRS 187
AR +F+EM P ++VV+W+ +I GY+R +
Sbjct: 221 ARKVFDEMVERNVVSFTVMIDGYAKVGDMASARALFDEAPEKDVVAWSALISGYSRNEQP 280
Query: 188 NEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLN 247
NEA+ +F +MV+ +P E +++++ A Q G+ + + Y + VL
Sbjct: 281 NEAVKIFFEMVSMN-VKPDEFIMVSLMSACSQLGNSDLAKWVDSYLSQTSIDTRQAHVLA 339
Query: 248 CLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGL 307
LID +AKCG + A KLF+D+ ++L+ S+I G ++HG G EAVE F RM GL
Sbjct: 340 ALIDMHAKCGNMEKAVKLFQDMP--SRDLIPCCSLIQGLSIHGRGVEAVELFNRMLDEGL 397
Query: 308 KPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAE 367
P+ V F +L ACS GGL+E+G +FFD M + V+P HY C++D+L RAG+L A
Sbjct: 398 IPDTVAFTVILTACSRGGLIEDGWHFFDTMKNKYSVVPSPNHYACMVDLLSRAGQLRAAY 457
Query: 368 KTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGV 427
+P + W LLGAC HG+VE+ E V ++LE+E G YVL+ NI A
Sbjct: 458 DLLKSMPLK-PHACAWGALLGACKLHGDVELREEVANRLLELEPEKAGSYVLLSNIYASA 516
Query: 428 GRFGDAERLRRVMDERNAFKVPGCSLV 454
++ D +R M ER K+PGCS +
Sbjct: 517 NQWLDVSIVRDEMKERGIRKIPGCSYI 543
>gi|356557876|ref|XP_003547236.1| PREDICTED: pentatricopeptide repeat-containing protein At5g19020,
mitochondrial-like [Glycine max]
Length = 912
Score = 270 bits (691), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 142/375 (37%), Positives = 216/375 (57%), Gaps = 3/375 (0%)
Query: 80 LIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERN 139
L+ C L+ G QLH ++ K GF + ++ T +++ Y + G + + F+ + +
Sbjct: 539 LVSACGRLNAIGDGWQLHGMVVKKGFDCYNFIQTTIIHFYAACGMMDLACLQFEVGAKDH 598
Query: 140 LVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVA 199
L +WN +++G +K ++ AR +F++MP R+V SW+ +I GY + ++S AL LF KMVA
Sbjct: 599 LESWNALVSGFIKNRMVDQARKIFDDMPERDVFSWSTMISGYAQTDQSRIALELFHKMVA 658
Query: 200 CEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCI 259
+P+E+T+++V AI G +K + H Y D + LID YAKCG I
Sbjct: 659 -SGIKPNEVTMVSVFSAIATLGTLKEGRWAHEYICNESIPLND-NLRAALIDMYAKCGSI 716
Query: 260 FSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLN 319
SA + F I + ++ W +II G A HG ++ F MQ+ +KPN +TF+ VL+
Sbjct: 717 NSALQFFNQIRDKTFSVSPWNAIICGLASHGHASMCLDVFSDMQRYNIKPNPITFIGVLS 776
Query: 320 ACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITD 379
AC H GLVE G F M V PDIKHYGC++D+LGRAG LE+AE+ +P + D
Sbjct: 777 ACCHAGLVEPGRRIFRIMKSAYNVEPDIKHYGCMVDLLGRAGLLEEAEEMIRSMPMK-AD 835
Query: 380 VVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRV 439
+V+W TLL AC HG+V +GER + + +GG VL+ NI A GR+ D +RR
Sbjct: 836 IVIWGTLLAACRTHGDVNIGERAAESLAGLAPSHGGGKVLLSNIYADAGRWEDVSLVRRA 895
Query: 440 MDERNAFKVPGCSLV 454
+ + ++PGCS V
Sbjct: 896 IQNQRMERMPGCSGV 910
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 100/334 (29%), Positives = 166/334 (49%), Gaps = 36/334 (10%)
Query: 96 LHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGE 155
+HA+ K+ + V V+T L+ Y + ++ +LFD MPE NLV+WNVM+ G K G
Sbjct: 423 IHAIAIKLFVEGLVLVSTNLMRAYCLCSGVGEARRLFDRMPEVNLVSWNVMLNGYAKAGL 482
Query: 156 LEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLP 215
++ AR LFE +P ++V+SW +IDGY MNR +EAL ++R M+ +EI ++ ++
Sbjct: 483 VDMARELFERVPDKDVISWGTMIDGYILMNRLHEALVMYRAMLRSGLAL-NEILVVNLVS 541
Query: 216 AIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCG-----C------------ 258
A + + +HG K+GF ++ + +I YA CG C
Sbjct: 542 ACGRLNAIGDGWQLHGMVVKKGFDCYNF-IQTTIIHFYAACGMMDLACLQFEVGAKDHLE 600
Query: 259 --------------IFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQK 304
+ A K+F+D+ +++ SW+++ISG+A + A+E F +M
Sbjct: 601 SWNALVSGFIKNRMVDQARKIFDDM--PERDVFSWSTMISGYAQTDQSRIALELFHKMVA 658
Query: 305 VGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLE 364
G+KPN VT +SV +A + G ++EG + + E L D LIDM + G +
Sbjct: 659 SGIKPNEVTMVSVFSAIATLGTLKEGRWAHEYICNESIPLND-NLRAALIDMYAKCGSIN 717
Query: 365 QAEKTALGIPSEITDVVVWRTLLGACSFHGNVEM 398
A + I + V W ++ + HG+ M
Sbjct: 718 SALQFFNQIRDKTFSVSPWNAIICGLASHGHASM 751
Score = 127 bits (320), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 152/296 (51%), Gaps = 47/296 (15%)
Query: 81 IRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNL 140
++ C++ S G QLH+++ K+G S+ ++ +L+NMY G +KD+ LFD P N
Sbjct: 279 LKYCSSSSQ---GRQLHSLVLKLGLHSNTFIQNSLINMYAKRGSIKDAQLLFDACPTLNP 335
Query: 141 VTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVAC 200
++ N+M+ G K G+L+ AR LF+ MP + VS+T +I G + EAL +F+ M +
Sbjct: 336 ISCNIMVCGYAKAGQLDNARKLFDIMPDKGCVSYTTMIMGLVQNECFREALEVFKDMRS- 394
Query: 201 EYTEPSEITILAVLPAIWQNGDVKSCQLIH--------------------------GYGE 234
+ P+++T++ V+ A G++ +C++IH G GE
Sbjct: 395 DGVVPNDLTLVNVIYACSHFGEILNCRMIHAIAIKLFVEGLVLVSTNLMRAYCLCSGVGE 454
Query: 235 KRGF----TAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHG 290
R ++ N +++ YAK G + A +LFE V K+++SW ++I G+ +
Sbjct: 455 ARRLFDRMPEVNLVSWNVMLNGYAKAGLVDMARELFE--RVPDKDVISWGTMIDGYILMN 512
Query: 291 MGKEAVENFGRMQKVGLKPNRVTFLSVLNACS-----------HGGLVEEGLNFFD 335
EA+ + M + GL N + +++++AC HG +V++G + ++
Sbjct: 513 RLHEALVMYRAMLRSGLALNEILVVNLVSACGRLNAIGDGWQLHGMVVKKGFDCYN 568
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 101/228 (44%), Gaps = 49/228 (21%)
Query: 247 NCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVG 306
N ++ YAK G + +A KLF DI + K VS+T++I G + +EA+E F M+ G
Sbjct: 339 NIMVCGYAKAGQLDNARKLF-DI-MPDKGCVSYTTMIMGLVQNECFREALEVFKDMRSDG 396
Query: 307 LKPNRVTFLSVLNACSHGG--------------LVEEGL--------------------- 331
+ PN +T ++V+ ACSH G L EGL
Sbjct: 397 VVPNDLTLVNVIYACSHFGEILNCRMIHAIAIKLFVEGLVLVSTNLMRAYCLCSGVGEAR 456
Query: 332 NFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACS 391
FD+M E ++ + +++ +AG ++ A + +P + DV+ W T++
Sbjct: 457 RLFDRMPEV-----NLVSWNVMLNGYAKAGLVDMARELFERVPDK--DVISWGTMIDGYI 509
Query: 392 FHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRF---GDAERL 436
+ + R +L G + +L+ N+++ GR GD +L
Sbjct: 510 LMNRLHEALVMYRAML--RSGLALNEILVVNLVSACGRLNAIGDGWQL 555
>gi|297734524|emb|CBI15771.3| unnamed protein product [Vitis vinifera]
Length = 436
Score = 270 bits (691), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 145/387 (37%), Positives = 233/387 (60%), Gaps = 8/387 (2%)
Query: 71 LFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSK 130
L D++++ F+++ CA LS + G ++H+ K+G V+V AL++ + S G ++ +
Sbjct: 7 LPDNYSFPFVLKACARLSLLHKGREIHSSTLKLGVHLDVFVQNALISAFSSCGAVEAARA 66
Query: 131 LFDEMPE--RNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSN 188
+FD +P R++V+WN MI+G ++ E A +F+ +P RN V WT +I GY + +
Sbjct: 67 VFDMLPALVRDVVSWNSMISGYLQSHRYELALKVFDRIPHRNTVCWTSMIAGYAQSDLFK 126
Query: 189 EALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNC 248
EA+ LFR+M + + TI VL A G + + IH Y E R D+ N
Sbjct: 127 EAIELFREMQIGGFAADAA-TIACVLSACGHWGALAQGRWIHLYCE-RNSIEMDLNARNA 184
Query: 249 LIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVG-L 307
LI Y+KCG I A ++F ++ + ++ SW+++ISG AM+G +A+ F +M+ + +
Sbjct: 185 LIGMYSKCGDIQKALEIFHGLT--QPDIFSWSAVISGLAMNGESDKALHLFSQMEMISDI 242
Query: 308 KPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAE 367
+PN +TFL VL AC+HGG V++GL +F+ M + + P I+HYGC++D+LGRA L +AE
Sbjct: 243 RPNEITFLGVLCACNHGGFVDKGLYYFNAMTQIYNLTPGIEHYGCMVDLLGRANLLVEAE 302
Query: 368 KTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGV 427
K +P + DVV+WR+LL AC HGN+E+ E ++I E+E G VL+ N+ A
Sbjct: 303 KFIRTLPIQ-PDVVIWRSLLFACRNHGNIELAEFAAKQIEELEPRRCGARVLLSNVYASA 361
Query: 428 GRFGDAERLRRVMDERNAFKVPGCSLV 454
R+GD +R+R+ M + K PGCS V
Sbjct: 362 SRWGDVKRVRKDMATQRIKKQPGCSFV 388
>gi|449491161|ref|XP_004158817.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g15930-like [Cucumis
sativus]
Length = 744
Score = 270 bits (691), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 134/381 (35%), Positives = 227/381 (59%), Gaps = 5/381 (1%)
Query: 74 SFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFD 133
+ T ++ C+ L G ++H+ + +S++ + A+++MY G + + +F
Sbjct: 240 TVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVESNLVLENAMIDMYADCGEMDSALGIFR 299
Query: 134 EMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALAL 193
M R++++W +++G GE++ AR+ F++MP ++ VSWT +IDGY R NR EAL L
Sbjct: 300 SMNNRDIISWTTIVSGFTNLGEIDVARNYFDKMPEKDYVSWTAMIDGYIRSNRFKEALEL 359
Query: 194 FRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTY 253
FR M A +P E T+++VL A G ++ + I Y + R D+ V N LID Y
Sbjct: 360 FRNMQATN-VKPDEFTMVSVLTACAHLGALELGEWIRTYID-RNKIKNDLFVRNALIDMY 417
Query: 254 AKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVT 313
KCG + A +F ++S +++ +WT++I G A++G G++A++ F M K + P+ +T
Sbjct: 418 FKCGDVDKAESIFREMS--QRDKFTWTAMIVGLAVNGHGEKALDMFSNMLKASILPDEIT 475
Query: 314 FLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGI 373
++ VL+AC+H GLV++G +F +M + + P+I HYGCL+D+L RAGRL++A + +
Sbjct: 476 YIGVLSACTHTGLVDKGRKYFLRMTSQHGIEPNIAHYGCLVDLLARAGRLKEAYEVIENM 535
Query: 374 PSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDA 433
P + + +VW LL C + +M E V ++ILE+E G YVL+ NI A R+ D
Sbjct: 536 PIK-ANSIVWGALLAGCRVYRESDMAEMVVKQILELEPDNGAVYVLLCNIYAACKRWNDL 594
Query: 434 ERLRRVMDERNAFKVPGCSLV 454
LR++M ++ K PGCSL+
Sbjct: 595 RELRQMMMDKGIKKXPGCSLI 615
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 120/468 (25%), Positives = 201/468 (42%), Gaps = 112/468 (23%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNL 92
++NT++ YS + PQ LY ++ + + P D +T+ FL +
Sbjct: 106 IWNTMIRGYSRLDFPQLGVSLYLEMLR------RGVKP--DRYTFPFLFKGFTRDIALEY 157
Query: 93 GTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVK 152
G QLH + K G Q +V+V+TALV MY+ G L + +FD P+ +++TWN++I+ K
Sbjct: 158 GRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWNMIISAYNK 217
Query: 153 WGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILA 212
G+ E +R LF M + V+ P+ +T++
Sbjct: 218 VGKFEESRRLFLVMEDKQVL--------------------------------PTTVTLVL 245
Query: 213 VLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFE----- 267
VL A + D+++ + +H Y K ++ + N +ID YA CG + SA +F
Sbjct: 246 VLSACSKLKDLRTGKKVHSY-VKNCKVESNLVLENAMIDMYADCGEMDSALGIFRSMNNR 304
Query: 268 ----------------DISVER--------KNLVSWTSIISGFAMHGMGKEAVENFGRMQ 303
+I V R K+ VSWT++I G+ KEA+E F MQ
Sbjct: 305 DIISWTTIVSGFTNLGEIDVARNYFDKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQ 364
Query: 304 KVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRL 363
+KP+ T +SVL AC+H G +E G + ++ ++ D+ LIDM + G +
Sbjct: 365 ATNVKPDEFTMVSVLTACAHLGALELG-EWIRTYIDRNKIKNDLFVRNALIDMYFKCGDV 423
Query: 364 EQAEK-------------TALGI--------------------PSEITDVVVWRTLLGAC 390
++AE TA+ + S + D + + +L AC
Sbjct: 424 DKAESIFREMSQRDKFTWTAMIVGLAVNGHGEKALDMFSNMLKASILPDEITYIGVLSAC 483
Query: 391 SFHGNVEMGERVTRKILEMERGYG-----GDYVLMYNILAGVGRFGDA 433
+ G V+ G + L M +G Y + ++LA GR +A
Sbjct: 484 THTGLVDKGRKY---FLRMTSQHGIEPNIAHYGCLVDLLARAGRLKEA 528
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/298 (24%), Positives = 141/298 (47%), Gaps = 20/298 (6%)
Query: 152 KWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITIL 211
++G+ ++AR LF+E+P N+ W +I GY+R++ ++L+ +M+ +P T
Sbjct: 85 EYGDFQYARRLFDEIPEPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLR-RGVKPDRYTFP 143
Query: 212 AVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISV 271
+ ++ ++ + +HG+ K G +++ V L+ Y CG + +A +F+
Sbjct: 144 FLFKGFTRDIALEYGRQLHGHVLKHGLQ-YNVFVHTALVQMYLLCGQLDTARGVFD--VC 200
Query: 272 ERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGL 331
+ ++++W IIS + G +E+ F M+ + P VT + VL+ACS + G
Sbjct: 201 PKADVITWNMIISAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGK 260
Query: 332 NFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEIT--DVVVWRTLLGA 389
V+ C+V ++ +IDM G ++ +ALGI + D++ W T++
Sbjct: 261 KVH-SYVKNCKVESNLVLENAMIDMYADCGEMD----SALGIFRSMNNRDIISWTTIVSG 315
Query: 390 CSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGV---GRFGDAERLRRVMDERN 444
+ G +++ K+ E DYV ++ G RF +A L R M N
Sbjct: 316 FTNLGEIDVARNYFDKMPE------KDYVSWTAMIDGYIRSNRFKEALELFRNMQATN 367
>gi|224119882|ref|XP_002318186.1| predicted protein [Populus trichocarpa]
gi|222858859|gb|EEE96406.1| predicted protein [Populus trichocarpa]
Length = 537
Score = 270 bits (691), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 157/455 (34%), Positives = 252/455 (55%), Gaps = 28/455 (6%)
Query: 13 ITTQIHSHLLTTNSLLHHSQ------------LFNTLLHFYSLAESPQKAFLLYKQLQQI 60
+TT+ S ++ SLLH+++ +NT++ ++L P A + Q++++
Sbjct: 61 LTTKAKSK--SSTSLLHYAKSIFNSIQNPSTFCYNTIIRVHTLLSFPIPALHFFTQMRRL 118
Query: 61 YTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYV 120
PL DS ++ F ++ CA L LH + K GF S +YV +L++ Y+
Sbjct: 119 SV-------PL-DSHSFPFTLKACAQLGGVFSARCLHCQVLKFGFLSDLYVMNSLIHGYM 170
Query: 121 SLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDG 180
D+ K+FDE P+R++V++NV+I G VK G++ AR LF+ MP R+ VSW II G
Sbjct: 171 VSDMSNDAYKVFDESPQRDVVSYNVLIDGFVKAGDVVKARELFDLMPVRDSVSWNTIIAG 230
Query: 181 YTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTA 240
+ + EA+ LF M+ E P + +++ L A Q G+++ + IH Y E+
Sbjct: 231 CAKGDYCEEAIELFDFMMDLE-IRPDNVALVSTLSACAQLGELEKGKKIHDYIERNAMKV 289
Query: 241 FDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFG 300
D + L+D YAKCGC+ A K+F+ S KNL +W +++ G AMHG G+ +E F
Sbjct: 290 -DTFLSTGLVDFYAKCGCVDIALKIFD--SSSDKNLFTWNAMLVGLAMHGYGELLLEYFS 346
Query: 301 RMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRA 360
RM + G+KP+ ++ L VL CSH GLV+E FD+M V + KHYGC+ D+LGRA
Sbjct: 347 RMIEAGVKPDGISILGVLVGCSHSGLVDEARKLFDEMESVYGVPREPKHYGCMADLLGRA 406
Query: 361 GRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLM 420
G +++ + +P D+ VW LLG C HG+VE+ E+ + ++E++ GG Y ++
Sbjct: 407 GLIKKVMEMIKDMPRG-GDMSVWSGLLGGCRIHGDVEIAEKAAKHLMELKPDDGGVYSIL 465
Query: 421 YNILAGVGRFGDAERLRRVMDE-RNAFKVPGCSLV 454
N+ A R+ D +RR + R K+ G SL+
Sbjct: 466 ANVYANAERWEDVMNIRRSLSSNRVVTKIAGFSLI 500
>gi|356499342|ref|XP_003518500.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g29230-like [Glycine max]
Length = 446
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 136/349 (38%), Positives = 215/349 (61%), Gaps = 4/349 (1%)
Query: 106 QSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEE 165
Q V + +V+ Y+ LG + + +LFD MP+ ++++WN +++G GE+E +FEE
Sbjct: 53 QCDVVLWNVIVSGYIELGDMVAARELFDRMPDCDVMSWNTVLSGYANNGEVELFVKVFEE 112
Query: 166 MPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKS 225
MP RNV SW G+I GY R EAL F++M+ P++ T++AVL A + GD++
Sbjct: 113 MPARNVYSWNGLIGGYVRNGLFKEALECFKRMLVDGVVVPNDYTVVAVLSACSRLGDLEI 172
Query: 226 CQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISG 285
+ +H Y + G+ ++ V N LID YAKCG I A +F+ + V K++++W +II+
Sbjct: 173 GKWVHVYADSIGYKG-NLFVGNALIDMYAKCGVIEKALDVFDGLDV--KDIITWNTIINS 229
Query: 286 FAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLP 345
AMH +A+ F M++ G +P+ VTF+ +L+AC+H GLV G F MV++ ++P
Sbjct: 230 LAMHXHAADALSLFEGMKRAGERPDGVTFVGILSACTHMGLVRNGFLHFQSMVDDYLIVP 289
Query: 346 DIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRK 405
I+HYGC++D+LGRAG + QA +P E DVV+W LLGAC + NVEM E ++
Sbjct: 290 QIEHYGCMVDLLGRAGLINQAVDIVRKMPME-PDVVIWAALLGACRXYKNVEMAELALQR 348
Query: 406 ILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
++E+E G++V++ NI +GR D RL+ M + KVPGCS++
Sbjct: 349 LIELEPNNPGNFVMLSNIYKDLGRSQDVARLKVAMRDTGFRKVPGCSVI 397
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 120/271 (44%), Gaps = 47/271 (17%)
Query: 124 FLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTR 183
F+ D+ K+F EM ++N+ W ++ V ++ AR LF+ P +VV W I+ GY
Sbjct: 9 FVADAYKVFAEMRDKNVFAWTAVVAAHVACHDMVSARRLFDLAPQCDVVLWNVIVSGYIE 68
Query: 184 MNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDI 243
+ A LF +M C D+
Sbjct: 69 LGDMVAARELFDRMPDC-----------------------------------------DV 87
Query: 244 RVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQ 303
N ++ YA G + K+FE++ +N+ SW +I G+ +G+ KEA+E F RM
Sbjct: 88 MSWNTVLSGYANNGEVELFVKVFEEMPA--RNVYSWNGLIGGYVRNGLFKEALECFKRML 145
Query: 304 KVG-LKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGR 362
G + PN T ++VL+ACS G +E G + + ++ LIDM + G
Sbjct: 146 VDGVVVPNDYTVVAVLSACSRLGDLEIG-KWVHVYADSIGYKGNLFVGNALIDMYAKCGV 204
Query: 363 LEQAEKTALGIPSEITDVVVWRTLLGACSFH 393
+E+A G+ ++ D++ W T++ + + H
Sbjct: 205 IEKALDVFDGL--DVKDIITWNTIINSLAMH 233
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 63/130 (48%), Gaps = 4/130 (3%)
Query: 73 DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLF 132
+ +T ++ C+ L +G +H +G++ +++V AL++MY G ++ + +F
Sbjct: 153 NDYTVVAVLSACSRLGDLEIGKWVHVYADSIGYKGNLFVGNALIDMYAKCGVIEKALDVF 212
Query: 133 DEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCR----NVVSWTGIIDGYTRMNRSN 188
D + ++++TWN +I L A SLFE M + V++ GI+ T M
Sbjct: 213 DGLDVKDIITWNTIINSLAMHXHAADALSLFEGMKRAGERPDGVTFVGILSACTHMGLVR 272
Query: 189 EALALFRKMV 198
F+ MV
Sbjct: 273 NGFLHFQSMV 282
>gi|224123726|ref|XP_002330193.1| predicted protein [Populus trichocarpa]
gi|222871649|gb|EEF08780.1| predicted protein [Populus trichocarpa]
Length = 485
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 148/458 (32%), Positives = 251/458 (54%), Gaps = 26/458 (5%)
Query: 12 NITTQIHSHLLT----------TNSLLHHSQ-----LFNTLLHFYSLAESPQKAFLLYKQ 56
N QI SH ++ N + +Q LFN ++ YSL +++F L+
Sbjct: 38 NQLNQILSHFVSICGSLNKMAYANRIFKQTQNPTIILFNAMIKGYSLNGPFEESFRLFSS 97
Query: 57 LQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALV 116
++ + + P D +T + L++ C++L LG +H + VGF+ + ++
Sbjct: 98 MK------NRGIWP--DEYTLAPLLKACSSLGVLQLGKCMHKEVLVVGFEGFSAIRIGVI 149
Query: 117 NMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTG 176
+Y S G ++D+ K+FDEM +R+++ WN+MI G K G+++ LF +M R+VVSW
Sbjct: 150 ELYSSCGVMEDAEKVFDEMYQRDVIVWNLMIHGFCKRGDVDMGLCLFRQMRKRSVVSWNI 209
Query: 177 IIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKR 236
+I + R +EAL LF M+ + +P E T++ VLP + G V + IH Y +
Sbjct: 210 MISCLAQSRRDSEALGLFHDMLDWGF-KPDEATVVTVLPICARLGSVDVGKWIHSYAKSS 268
Query: 237 GFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAV 296
G + V N L+D Y K G +A ++F+++ RKN++SW ++ISG A++G G+ V
Sbjct: 269 GLYRDFVAVGNALVDFYNKSGMFETARRVFDEMP--RKNVISWNTLISGLALNGNGELGV 326
Query: 297 ENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDM 356
E M G++PN TF+ VL+ C+H GL E G MVE ++ P ++HYGC++D+
Sbjct: 327 ELLEEMMNEGVRPNDATFVGVLSCCAHAGLFERGRELLASMVEHHQIEPKLEHYGCMVDL 386
Query: 357 LGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGD 416
LGR+G + +A +P + +W +LL AC HG+VE+ ++++++E G+
Sbjct: 387 LGRSGCVREAYDLIRIMPGGAPNAALWGSLLSACRTHGDVELAHLAVKELIDLEPWNSGN 446
Query: 417 YVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
YVL+ N+ A R+ +R +M E+N K PG S++
Sbjct: 447 YVLLSNMYAEEERWDKVANVRGMMREKNVKKTPGQSVI 484
>gi|147866113|emb|CAN78822.1| hypothetical protein VITISV_006669 [Vitis vinifera]
Length = 599
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 149/382 (39%), Positives = 217/382 (56%), Gaps = 20/382 (5%)
Query: 73 DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLF 132
D T ++ +CA L +LG + H I + G + V + AL++MY+ G L+ + KLF
Sbjct: 179 DEVTMIGVVSSCAQLEDLDLGRESHCYIEENGLKLTVPLANALMDMYMKCGNLESARKLF 238
Query: 133 DEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALA 192
D M + +V+W M LF+EMP ++VV W +I GY NR EALA
Sbjct: 239 DSMTNKTMVSWTTM---------------LFDEMPDKDVVPWNAMIGGYVHANRGKEALA 283
Query: 193 LFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDT 252
LF +M A P E+T+++ L A Q G + IH Y EK + ++ + LID
Sbjct: 284 LFNEMQAMN-INPDEVTMVSCLSACSQLGALDVGIWIHHYIEKHELS-LNVALGTALIDM 341
Query: 253 YAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRV 312
YAKCG I A ++F+++ +N ++WT+IISG A+HG A+ F M + P+ V
Sbjct: 342 YAKCGKITKAIQVFQELP--GRNSLTWTAIISGLALHGNAHGAIAYFSEMIDNSVMPDEV 399
Query: 313 TFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALG 372
TFL +L+AC HGGLVEEG +F +M + + P +KHY C++D+LGRAG LE+AE+
Sbjct: 400 TFLGLLSACCHGGLVEEGRKYFSQMSSKFNLSPKLKHYSCMVDLLGRAGLLEEAEELIKS 459
Query: 373 IPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGD 432
+P E D VVW L AC HGNV MGER K+L+M+ G YVL+ N+ + +
Sbjct: 460 MPIE-ADAVVWGALFFACRIHGNVLMGERAASKLLQMDPHDSGIYVLLANMYGEAEMWKE 518
Query: 433 AERLRRVMDERNAFKVPGCSLV 454
A + R++M +R K PGCS +
Sbjct: 519 AGKXRKLMRQRGVEKTPGCSSI 540
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 101/377 (26%), Positives = 187/377 (49%), Gaps = 57/377 (15%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+N + + +E+P++A +LYK++ Q P D++TY L + CA LS +G
Sbjct: 46 WNVAIRGFLDSENPREAVVLYKRVLQ--CDGTKP-----DNYTYPLLFKACARLSLIRMG 98
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
+++ + +GF S ++V+ A++++ VS G
Sbjct: 99 SEILGHVLHLGFDSDIFVSNAVIHLLVSCG------------------------------ 128
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
+L+ AR +F++ R++VSW +I+GY R + EAL +R+M E +P E+T++ V
Sbjct: 129 -DLDGARKMFDKSCVRDLVSWNSMINGYVRRGWAYEALNFYREM-KVEGIKPDEVTMIGV 186
Query: 214 LPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDIS--- 270
+ + Q D+ + H Y E+ G + + N L+D Y KCG + SA KLF+ ++
Sbjct: 187 VSSCAQLEDLDLGRESHCYIEENGLK-LTVPLANALMDMYMKCGNLESARKLFDSMTNKT 245
Query: 271 -----------VERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLN 319
+ K++V W ++I G+ GKEA+ F MQ + + P+ VT +S L+
Sbjct: 246 MVSWTTMLFDEMPDKDVVPWNAMIGGYVHANRGKEALALFNEMQAMNINPDEVTMVSCLS 305
Query: 320 ACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITD 379
ACS G ++ G+ + +E+ E+ ++ LIDM + G++ +A + +P +
Sbjct: 306 ACSQLGALDVGI-WIHHYIEKHELSLNVALGTALIDMYAKCGKITKAIQVFQELPGR--N 362
Query: 380 VVVWRTLLGACSFHGNV 396
+ W ++ + HGN
Sbjct: 363 SLTWTAIISGLALHGNA 379
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 117/243 (48%), Gaps = 6/243 (2%)
Query: 145 VMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTE 204
+ + +W +L++ ++ N SW I G+ EA+ L+++++ C+ T+
Sbjct: 17 IAFCAISEWRDLDYCTNILFNTRNPNTFSWNVAIRGFLDSENPREAVVLYKRVLQCDGTK 76
Query: 205 PSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASK 264
P T + A + ++ I G+ GF + DI V N +I CG + A K
Sbjct: 77 PDNYTYPLLFKACARLSLIRMGSEILGHVLHLGFDS-DIFVSNAVIHLLVSCGDLDGARK 135
Query: 265 LFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHG 324
+F+ V ++LVSW S+I+G+ G EA+ + M+ G+KP+ VT + V+++C+
Sbjct: 136 MFDKSCV--RDLVSWNSMINGYVRRGWAYEALNFYREMKVEGIKPDEVTMIGVVSSCAQL 193
Query: 325 GLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWR 384
++ G +EE + + L+DM + G LE A K + ++ +V W
Sbjct: 194 EDLDLGRESH-CYIEENGLKLTVPLANALMDMYMKCGNLESARKLFDSMTNKT--MVSWT 250
Query: 385 TLL 387
T+L
Sbjct: 251 TML 253
>gi|357111691|ref|XP_003557645.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Brachypodium distachyon]
Length = 598
Score = 270 bits (689), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 153/421 (36%), Positives = 233/421 (55%), Gaps = 44/421 (10%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
NT+L ++ + P+ A L+++ H P D+ TY L++ CA L G
Sbjct: 93 LNTVLRIFASSARPRVALALHRR------HLAPP-----DTHTYPPLLQACARLLALRYG 141
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
LHA K G S V+V +LV++Y + G + + ++FDE+P
Sbjct: 142 EGLHAEACKNGLVSLVFVKNSLVHLYGACGLFESAHRVFDEIPP---------------- 185
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
P RN+VSW +++G+ R NE L +FR+M+ E+ P T+++V
Sbjct: 186 -------------PERNLVSWNSVLNGFAANGRPNEVLTVFREMLEVEFA-PDGFTVVSV 231
Query: 214 LPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVER 273
L A + G + + +H + K G + N LID YAKCG + A K+F ++ V R
Sbjct: 232 LTACAEIGVLALGRRVHVFVAKVGLVG-NAHAGNALIDLYAKCGGVDDARKMFGEMGVGR 290
Query: 274 KNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNF 333
+VSWTS+I G A++G G +A++ F M++ L P +T + VL ACSH GLV++G +
Sbjct: 291 -TVVSWTSLIVGLAVNGFGMDALQLFSMMEREKLMPTEITMVGVLYACSHCGLVDDGFRY 349
Query: 334 FDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFH 393
FD+M E + P I+H GC++D+LGRAGR+E+A +P E + VVWRTLLGAC+ H
Sbjct: 350 FDQMKAEYGITPRIEHLGCMVDLLGRAGRVEEAHNYITTMPLE-PNAVVWRTLLGACAMH 408
Query: 394 GNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSL 453
+E+GE +++E++ G+ GDYVL+ N+ AGVGR+ D LR+ M K PG SL
Sbjct: 409 KKLEIGEAAWARLVELDPGHSGDYVLLSNLYAGVGRWADVHVLRKTMVTHGVRKNPGHSL 468
Query: 454 V 454
V
Sbjct: 469 V 469
>gi|359491803|ref|XP_002269228.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 550
Score = 270 bits (689), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 160/498 (32%), Positives = 255/498 (51%), Gaps = 76/498 (15%)
Query: 16 QIHSHLLTTNSLLHHSQLFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLF--- 72
Q H+HL+ + L H LL +L SP + L + + I+ H+H+P P +F
Sbjct: 29 QAHAHLIVSG-LASHPFTVTRLLACAAL--SPSASDLPHAK--TIFLHTHNPSPFMFNTI 83
Query: 73 ------------------------DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSH 108
D+FT+ FLI++ + LG QLHA + K G
Sbjct: 84 IMASSRTLDSVTFYVCMLHAGHFPDNFTFPFLIKSSSASPTSLLGHQLHAHVVKFGLDRD 143
Query: 109 VYVNTALVNMYVSLGFLKDSSKLFDE--------------------------------MP 136
V+V ++ +Y S L+ + K+FDE MP
Sbjct: 144 VFVVNNMIALYSSFRELRSARKVFDESYSLVDVVSWTTLITGFSNSGQIDEARKIFDLMP 203
Query: 137 ERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRK 196
+N V+WN MI+G + AR LF+EMP R+ SW+ ++ GY+++ NEAL LF +
Sbjct: 204 LKNTVSWNAMISGYAGSSRINEARKLFDEMPDRDAASWSAMVSGYSQLGMCNEALDLFME 263
Query: 197 MVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKC 256
MV + P+E +++ + A Q ++ + +H Y +++ ++ + L+D Y KC
Sbjct: 264 MVTGDKMIPNEAALVSAVSACAQLRALEEGRWLHSYIKEKKLR-INVTLGTVLLDMYGKC 322
Query: 257 GCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLS 316
G I A+ +F +S +N+ SW S+I+G A++G GKEA+ F +MQ VG PN +TF++
Sbjct: 323 GSILDAAGVFNLMS--ERNVNSWNSMIAGLALNGCGKEALALFWKMQFVGPSPNAITFIA 380
Query: 317 VLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQA----EKTALG 372
+L CSH GL+ EG F M + + P +KHYGC++D+LGRAG +++A EK +
Sbjct: 381 LLTGCSHSGLITEGRWLFSMMTQVYGIKPQLKHYGCMVDLLGRAGLVKEALDFVEKMPMK 440
Query: 373 IPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGD 432
SE+ W L+GAC HG VE+GE + ++++++E +GG Y L+ NI A R+ D
Sbjct: 441 PHSEL-----WGALVGACRIHGQVELGEELGKRLIDLEPHHGGRYALLCNIFAAAQRWDD 495
Query: 433 AERLRRVMDERNAFKVPG 450
+R + R K PG
Sbjct: 496 VAMVRDLEKGRKVLKNPG 513
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 113/260 (43%), Gaps = 38/260 (14%)
Query: 81 IRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNL 140
+ CA L G LH+ I + + +V + T L++MY G + D++ +F+ M ERN+
Sbjct: 281 VSACAQLRALEEGRWLHSYIKEKKLRINVTLGTVLLDMYGKCGSILDAAGVFNLMSERNV 340
Query: 141 VTWNVMITGLVKWGELEFARSLFEEM----PCRNVVSWTGIIDGYTRMNRSNEALALFRK 196
+WN MI GL G + A +LF +M P N +++ ++ G + E LF
Sbjct: 341 NSWNSMIAGLALNGCGKEALALFWKMQFVGPSPNAITFIALLTGCSHSGLITEGRWLFSM 400
Query: 197 MVACEYTEPSEITILAVLPAIWQNGDVK-----------------------SCQLIHG-- 231
M +P ++ + + G VK +C+ IHG
Sbjct: 401 MTQVYGIKPQLKHYGCMVDLLGRAGLVKEALDFVEKMPMKPHSELWGALVGACR-IHGQV 459
Query: 232 -YGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHG 290
GE+ G D+ + YA IF+A++ ++D+++ R +L ++ +G
Sbjct: 460 ELGEELGKRLIDLEPHHG--GRYALLCNIFAAAQRWDDVAMVR-DLEKGRKVLKNPGNNG 516
Query: 291 MGKEA----VENFGRMQKVG 306
+G E V NFG + G
Sbjct: 517 LGAEEGSIMVMNFGATDEDG 536
>gi|242034539|ref|XP_002464664.1| hypothetical protein SORBIDRAFT_01g023020 [Sorghum bicolor]
gi|241918518|gb|EER91662.1| hypothetical protein SORBIDRAFT_01g023020 [Sorghum bicolor]
Length = 650
Score = 270 bits (689), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 150/421 (35%), Positives = 239/421 (56%), Gaps = 11/421 (2%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+NTL+ Y + P++A L+ +L + + P D T + CA + LG
Sbjct: 190 WNTLIGGYVRSGLPREALELFWRLVE----DGKAVRP--DEVTMIGAVSGCAQMGDLELG 243
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
+LH + G + V + A+++MYV G L+ + +F+ + + +V+W MI G +
Sbjct: 244 KRLHEFVDSKGVRCTVRLMNAVMDMYVKCGSLELAKSVFERIDNKTVVSWTTMIVGHARL 303
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
G +E AR LF+EMP R+V W ++ GY + + EA+ALF +M + +P+EIT++ +
Sbjct: 304 GMMEDARMLFDEMPERDVFPWNALMAGYVQNKQGKEAIALFHEMQESK-VDPNEITMVNL 362
Query: 214 LPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVER 273
L A Q G ++ +H Y ++ + + L+D YAKCG I A +F++I
Sbjct: 363 LSACSQLGALEMGMWVHHYIDRHQLY-LSVALGTSLVDMYAKCGNIKKAICIFKEIP--D 419
Query: 274 KNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNF 333
KN ++WT++I G A HG EA+E F RM +GL+P+ +TF+ VL+AC H GLV+EG F
Sbjct: 420 KNALTWTAMICGLANHGHADEAIEYFQRMIDLGLQPDEITFIGVLSACCHAGLVKEGRQF 479
Query: 334 FDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFH 393
F M E+ + +KHY C+ID+LGRAG L++AE+ +P + D VVW L AC H
Sbjct: 480 FSLMHEKYHLERKMKHYSCMIDLLGRAGHLDEAEQLVNTMPMD-PDAVVWGALFFACRMH 538
Query: 394 GNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSL 453
GN+ +GE+ K++E++ G YVL+ N+ A A+++R +M KVPGCS
Sbjct: 539 GNITLGEKAAMKLVELDPSDSGIYVLLANMYAEANMRKKADKVRVMMRHLGVEKVPGCSC 598
Query: 454 V 454
+
Sbjct: 599 I 599
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 98/392 (25%), Positives = 176/392 (44%), Gaps = 73/392 (18%)
Query: 73 DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLF 132
D T+ FL++ CA L + G + + K+GF + V+V A V+ + G + + +LF
Sbjct: 120 DHLTFPFLLKACARLQYRPYGAAVLGHVQKLGFSADVFVVNAGVHFWSVSGSMVLARRLF 179
Query: 133 DEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALA 192
DE P R++V+WN +I G V+ G A LF W + DG
Sbjct: 180 DESPARDVVSWNTLIGGYVRSGLPREALELF----------WRLVEDG------------ 217
Query: 193 LFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDT 252
+ P E+T++ + Q GD++ + +H + + +G +R++N ++D
Sbjct: 218 --------KAVRPDEVTMIGAVSGCAQMGDLELGKRLHEFVDSKGVRC-TVRLMNAVMDM 268
Query: 253 YAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGM--------------------- 291
Y KCG + A +FE I + K +VSWT++I G A GM
Sbjct: 269 YVKCGSLELAKSVFERI--DNKTVVSWTTMIVGHARLGMMEDARMLFDEMPERDVFPWNA 326
Query: 292 ----------GKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEEC 341
GKEA+ F MQ+ + PN +T +++L+ACS G +E G+ + ++
Sbjct: 327 LMAGYVQNKQGKEAIALFHEMQESKVDPNEITMVNLLSACSQLGALEMGM-WVHHYIDRH 385
Query: 342 EVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITD--VVVWRTLLGACSFHGNVEMG 399
++ + L+DM + G + K A+ I EI D + W ++ + HG+ +
Sbjct: 386 QLYLSVALGTSLVDMYAKCGNI----KKAICIFKEIPDKNALTWTAMICGLANHGHADEA 441
Query: 400 ERVTRKILEMERGYGGDYVLMYNILAGVGRFG 431
++++++ G D + +L+ G
Sbjct: 442 IEYFQRMIDL--GLQPDEITFIGVLSACCHAG 471
>gi|356547111|ref|XP_003541961.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05750,
chloroplastic-like [Glycine max]
Length = 521
Score = 270 bits (689), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 153/433 (35%), Positives = 245/433 (56%), Gaps = 11/433 (2%)
Query: 26 SLLHHSQLFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCA 85
SL H ++ + ++ + + K+ L K + + + P + T+ L+ CA
Sbjct: 45 SLRHTTKYNDPIVSWTTSIADYCKSGHLVKAASKFVQMREAAIEP--NHITFITLLSACA 102
Query: 86 ---TLSHPNLGTQLHAVISKVGFQ-SHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLV 141
+ S + GT +HA + K+G + V V TAL++MY G ++ + FD+M RNLV
Sbjct: 103 HYPSRSSISFGTAIHAHVRKLGLDINDVMVGTALIDMYAKCGRVESARLAFDQMGVRNLV 162
Query: 142 TWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACE 201
+WN MI G ++ G+ E A +F+ +P +N +SWT +I G+ + + EAL FR+M
Sbjct: 163 SWNTMIDGYMRNGKFEDALQVFDGLPVKNAISWTALIGGFVKKDYHEEALECFREM-QLS 221
Query: 202 YTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFS 261
P +T++AV+ A G + +H + F +++V N LID Y++CGCI
Sbjct: 222 GVAPDYVTVIAVIAACANLGTLGLGLWVHRLVMTQDFRN-NVKVSNSLIDMYSRCGCIDL 280
Query: 262 ASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNAC 321
A ++F+ + ++ LVSW SII GFA++G+ EA+ F MQ+ G KP+ V++ L AC
Sbjct: 281 ARQVFD--RMPQRTLVSWNSIIVGFAVNGLADEALSYFNSMQEEGFKPDGVSYTGALMAC 338
Query: 322 SHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVV 381
SH GL+ EGL F+ M +LP I+HYGCL+D+ RAGRLE+A +P + +V+
Sbjct: 339 SHAGLIGEGLRIFEHMKRVRRILPRIEHYGCLVDLYSRAGRLEEALNVLKNMPMKPNEVI 398
Query: 382 VWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMD 441
+ +LL AC GN+ + E V ++E++ G +YVL+ NI A VG++ A ++RR M
Sbjct: 399 LG-SLLAACRTQGNIGLAENVMNYLIELDSGGDSNYVLLSNIYAAVGKWDGANKVRRRMK 457
Query: 442 ERNAFKVPGCSLV 454
ER K PG S +
Sbjct: 458 ERGIQKKPGFSSI 470
>gi|225428400|ref|XP_002283651.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21065
[Vitis vinifera]
gi|297744424|emb|CBI37686.3| unnamed protein product [Vitis vinifera]
Length = 571
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 154/439 (35%), Positives = 242/439 (55%), Gaps = 44/439 (10%)
Query: 18 HSHLLTTNSLLHHSQLFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTY 77
++HL+ + +S NT++ YS P +A L+ + P P D FTY
Sbjct: 46 YAHLILNSLSTQNSFFHNTMIRAYSQTPDPTQALHLFLSMLC------QPTSPRPDKFTY 99
Query: 78 SFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPE 137
FL+++CA L P +G QLH +I K G +S YV+ L++MY S G + K+F +M +
Sbjct: 100 PFLLKSCARLKQPRVGKQLHGLIYKSGLESDRYVSNGLIHMYSSCGKSGRAYKVFGKMRD 159
Query: 138 RNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKM 197
R+ VVSWT +IDG+ +R+ EA+ LF +M
Sbjct: 160 RD-------------------------------VVSWTSMIDGFVDDDRALEAIRLFEEM 188
Query: 198 VACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCG 257
V + EP+E T+++VL A G V + + G E+R + V LID YAKCG
Sbjct: 189 VE-DGVEPNEATVVSVLRACADAGAVGMGRRVQGVIEERKI-GLEANVRTALIDMYAKCG 246
Query: 258 CIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSV 317
I SA K+F+ I K++ +WT++ISG A HG+ +EAV F +M+ GL+P+ T +V
Sbjct: 247 SIGSARKVFDGIV--NKDVFAWTAMISGLANHGLCEEAVTLFDQMESFGLRPDERTMTAV 304
Query: 318 LNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEI 377
L+AC + G EG +F+ M + + P I+HYGC++D+L R G L++AE+ +P E
Sbjct: 305 LSACRNAGWFSEGFAYFNSMWCKYGIKPTIQHYGCMVDLLARTGHLDEAEEFIRKMPIE- 363
Query: 378 TDVVVWRTLLGACSFHGNVEMGERV--TRKILEMERGYGGDYVLMYNILAGVGRFGDAER 435
DVV+WRTL+ A HG+++ E++ R +L+M+ G YVL+ N+ A G++ D +
Sbjct: 364 PDVVLWRTLIWASKVHGDIDRSEQLMKDRGLLKMDSDDCGSYVLLGNVYASAGKWHDKAK 423
Query: 436 LRRVMDERNAFKVPGCSLV 454
+R +M+++ K PGCS +
Sbjct: 424 MRELMNQKGLSKPPGCSRI 442
>gi|125599128|gb|EAZ38704.1| hypothetical protein OsJ_23104 [Oryza sativa Japonica Group]
Length = 1280
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 159/434 (36%), Positives = 241/434 (55%), Gaps = 48/434 (11%)
Query: 25 NSLLHHSQL----FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFL 80
+ LL H L NT+L + + P+ A L+++ LP D+ TY L
Sbjct: 762 SRLLPHGPLDPFPLNTVLRIAAGSPRPRVALELHRR--------RLALP---DTHTYPPL 810
Query: 81 IRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNL 140
I+ CA L G LHA +K GF + V+V +LV++Y + G + + K+FDEMP R
Sbjct: 811 IQACARLLALREGECLHAEAAKNGFVTLVFVQNSLVHLYGACGLFESAHKVFDEMPVRG- 869
Query: 141 VTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVAC 200
RN+VSW +++ + R NE L +F +M+
Sbjct: 870 ----------------------------RNLVSWNSMLNSFAANGRPNEVLTVFWEMLGV 901
Query: 201 EYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIF 260
++ P TI++VL A + G + + +H Y EK G + V N LID YAKCG +
Sbjct: 902 DFA-PDGFTIVSVLTACAEFGALALGRRVHVYVEKVGLVE-NSHVSNALIDLYAKCGSVN 959
Query: 261 SASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNA 320
A ++FE++ + R +VSWTS+I G A +G GKEA+E F M++ L P +T + VL A
Sbjct: 960 DARRIFEEMGLGR-TVVSWTSLIVGLAANGFGKEALELFSLMEREKLVPTEITMVGVLYA 1018
Query: 321 CSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDV 380
CSH GLV++G +FD+M E+ + P I+H GC++D+LGRAGR+E+A + +P E +
Sbjct: 1019 CSHCGLVDDGFRYFDRMKEDYGISPRIEHLGCMVDLLGRAGRVEEAYDYIITMPLE-PNA 1077
Query: 381 VVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVM 440
VVWRTLLG+C+ H +E+G+ +++E++ G+ GDYVL+ N+ A VG + D LR+ M
Sbjct: 1078 VVWRTLLGSCAMHKKLELGKVAWERLVELDPGHSGDYVLLSNLYAAVGMWADVHVLRKTM 1137
Query: 441 DERNAFKVPGCSLV 454
+ K PG SLV
Sbjct: 1138 VKDRVRKNPGHSLV 1151
>gi|357455473|ref|XP_003598017.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355487065|gb|AES68268.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 479
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 162/433 (37%), Positives = 240/433 (55%), Gaps = 53/433 (12%)
Query: 31 SQLFNTLLH-FYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSH 89
S L+NT++ F + A +K++Q +H P D+FT+SF+++ A L
Sbjct: 75 SFLWNTMIRGFGNSTTHSHNAIHFFKRMQL----AHRP-----DNFTFSFILKIIARLRF 125
Query: 90 PNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITG 149
NLG QLH + K GF++H YV +L++MY G LKD
Sbjct: 126 VNLGKQLHCSLFKFGFENHTYVRNSLIHMY---GMLKD---------------------- 160
Query: 150 LVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYT----EP 205
+E A LFEEM N+VSW IID + + NEA+ LF KMV ++ +P
Sbjct: 161 ------IEIAHQLFEEMYQPNLVSWNSIIDCHVYCGKYNEAIDLFTKMVQQQHNGMELQP 214
Query: 206 SEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAF--DIRVLNCLIDTYAKCGCIFSAS 263
T++ L A G + + +H + + G +F I V N L+D YAKCG + A
Sbjct: 215 DHATLVVTLSACGAIGSLDFGRKVHSF-VRDGVNSFGESISVFNALVDMYAKCGAVEEAY 273
Query: 264 KLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGL-KPNRVTFLSVLNACS 322
+ F ++ +RKN+VSW +I GFA HG G+EA+ F RM + +P+ +TFL VL ACS
Sbjct: 274 ETFSNM--KRKNVVSWNVMILGFASHGNGEEALALFTRMLHENVERPDEITFLCVLCACS 331
Query: 323 HGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVV 382
HGGLV+EG +F+ M + + P IKHYGC++D+LGRAG +A + +P E + ++
Sbjct: 332 HGGLVDEGRRYFEIMNRDYNIKPTIKHYGCMVDLLGRAGLFVEAYELIKSMPVE-CNAII 390
Query: 383 WRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDE 442
WRTLL AC +GNVE+GE+V + ++E+E + DYVL+ N+ A G++ + + RR M E
Sbjct: 391 WRTLLAACRNYGNVELGEKVRKHLMELEPDHSSDYVLLANMYASTGQWNEMSKERRSMQE 450
Query: 443 RNAFKV-PGCSLV 454
R K PG S +
Sbjct: 451 RRVRKPEPGNSFI 463
>gi|449467271|ref|XP_004151347.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
chloroplastic-like [Cucumis sativus]
gi|449530724|ref|XP_004172343.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
chloroplastic-like [Cucumis sativus]
Length = 543
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 153/421 (36%), Positives = 237/421 (56%), Gaps = 12/421 (2%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+NT++ +S + +PQ A L+ + + + P TY + + + L + G
Sbjct: 91 WNTVIRGFSQSSNPQIALYLF--IDMLVSSQVEP-----QRLTYPSIFKAYSQLGLAHDG 143
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
QLH I K+G Q ++ ++ MY + GFL ++ ++F++ E ++V+WN MI GL K
Sbjct: 144 AQLHGRIIKLGLQFDPFIRNTILYMYATGGFLSEARRIFNQEMEFDVVSWNSMILGLAKC 203
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
GE++ +R LF++MP +N +SW +I GY R EAL LF KM E +PSE T++++
Sbjct: 204 GEIDESRKLFDKMPVKNPISWNSMIGGYVRNGMFKEALKLFIKMQE-ERIQPSEFTMVSL 262
Query: 214 LPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVER 273
L A Q G ++ IH Y +K I V+ +ID Y KCG I +A ++FE I
Sbjct: 263 LNASAQIGALRQGVWIHEYIKKNNLQLNAI-VVTAIIDMYCKCGSIGNALQVFEKIPC-- 319
Query: 274 KNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNF 333
++L SW S+I G A++G KEA+ F ++ LKP+ ++F++VL AC+HG +V+EG+ F
Sbjct: 320 RSLSSWNSMIFGLAVNGCEKEAILVFKMLESSSLKPDCISFMAVLTACNHGAMVDEGMEF 379
Query: 334 FDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFH 393
F +M + P IKHY ++DM+ RAG LE+AE+ +P E D ++W LL AC +
Sbjct: 380 FSRMKNTYRIEPSIKHYNLMVDMISRAGFLEEAEQFIKTMPIE-KDAIIWGCLLSACRIY 438
Query: 394 GNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSL 453
GN EM +R K+ E++ YVLM NI A F A R M + K PG S
Sbjct: 439 GNTEMAKRAAEKVNELDPEETMGYVLMANIHAWGNNFVGAMEKRVAMRMKKVEKEPGGSF 498
Query: 454 V 454
+
Sbjct: 499 I 499
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 124/271 (45%), Gaps = 35/271 (12%)
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
G +++A +F +M N+ SW +I G+++ + AL LF M+ EP +T ++
Sbjct: 71 GNMDYAYLVFLQMQNPNLFSWNTVIRGFSQSSNPQIALYLFIDMLVSSQVEPQRLTYPSI 130
Query: 214 LPAIWQNGDVKSCQLIHGYGEKRGFT------------------------------AFDI 243
A Q G +HG K G FD+
Sbjct: 131 FKAYSQLGLAHDGAQLHGRIIKLGLQFDPFIRNTILYMYATGGFLSEARRIFNQEMEFDV 190
Query: 244 RVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQ 303
N +I AKCG I + KLF+ + V KN +SW S+I G+ +GM KEA++ F +MQ
Sbjct: 191 VSWNSMILGLAKCGEIDESRKLFDKMPV--KNPISWNSMIGGYVRNGMFKEALKLFIKMQ 248
Query: 304 KVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRL 363
+ ++P+ T +S+LNA + G + +G+ + + +++ + + +IDM + G +
Sbjct: 249 EERIQPSEFTMVSLLNASAQIGALRQGV-WIHEYIKKNNLQLNAIVVTAIIDMYCKCGSI 307
Query: 364 EQAEKTALGIPSEITDVVVWRTLLGACSFHG 394
A + IP + W +++ + +G
Sbjct: 308 GNALQVFEKIPCR--SLSSWNSMIFGLAVNG 336
>gi|326504202|dbj|BAJ90933.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 634
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 151/419 (36%), Positives = 239/419 (57%), Gaps = 13/419 (3%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+NT++ + A +A L++++++ L D FT+ L+ C+ + +G
Sbjct: 177 WNTMIGGCAQAGETSEACALFREMRRQGV--------LADVFTFVSLLLVCSKEGNLEVG 228
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
+H + G + + + ALV+MY G L + + FD MP +N+V+W M+ L K
Sbjct: 229 RLVHCHMLASGSRVDLILGNALVDMYGKCGDLWMAHRCFDVMPIKNVVSWTSMLCALAKH 288
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
G ++ AR FE+MP RN++SW +I Y + R E L L+ +M + T P E+T+ V
Sbjct: 289 GSVDAARDWFEQMPERNIISWNAMISCYVQGGRFPETLGLYNRMKSLGLT-PDEVTLAGV 347
Query: 214 LPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVER 273
L QNGD+ S ++IH Y + F+ + VLN LID YA+CG + ++ LF ++
Sbjct: 348 LSVHGQNGDLASGRMIHCYIQD-SFSDPGVTVLNSLIDMYARCGQVDTSISLFTEMP--N 404
Query: 274 KNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNF 333
KN +SW II AMHG +EAV F M P+ +TF+ +L+ACSHGGL+E+G +
Sbjct: 405 KNTISWNVIIGALAMHGRAQEAVMFFRAMVSDAFSPDEITFVGLLSACSHGGLLEDGQYY 464
Query: 334 FDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFH 393
F M V P+++HY C++D+LGR G L +A +P + DVVVW L+GAC H
Sbjct: 465 FKAMRHIYNVKPEVEHYACMVDLLGRHGHLAKAVDLIKDMPMK-PDVVVWGALIGACRIH 523
Query: 394 GNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCS 452
G+VE+G+ +++LE+E GG +VL+ N+L ++ D +RLR++M +R K G S
Sbjct: 524 GHVEIGKLAIKQLLELEGINGGLFVLISNLLYETRQWEDMKRLRKLMRDRGTKKDMGVS 582
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 102/396 (25%), Positives = 174/396 (43%), Gaps = 78/396 (19%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+N+L+ YS + PQ+A L++ + + LP + FT F+++ C+
Sbjct: 75 YNSLIRAYSNSGCPQEALCLHRDVLR-----RGILP---NEFTLPFVLKACSRARAAEHA 126
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEM-PERNLVTWNVMITGLVK 152
H V K+G+ V+V AL++ S G L+DS +LF EM P RN+V+WN MI G +
Sbjct: 127 LATHGVAIKLGYVRQVFVGNALLHSSASAGSLRDSRRLFAEMAPHRNVVSWNTMIGGCAQ 186
Query: 153 WGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILA 212
GE A +LF EM + V++ T ++
Sbjct: 187 AGETSEACALFREMRRQGVLA--------------------------------DVFTFVS 214
Query: 213 VLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVE 272
+L + G+++ +L+H + G + D+ + N L+D Y KCG ++ A + F+ + +
Sbjct: 215 LLLVCSKEGNLEVGRLVHCHMLASG-SRVDLILGNALVDMYGKCGDLWMAHRCFDVMPI- 272
Query: 273 RKNLVSWTSIISGFAMHG----------------------------MGKEAVENFG---R 301
KN+VSWTS++ A HG G E G R
Sbjct: 273 -KNVVSWTSMLCALAKHGSVDAARDWFEQMPERNIISWNAMISCYVQGGRFPETLGLYNR 331
Query: 302 MQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAG 361
M+ +GL P+ VT VL+ G + G +++ P + LIDM R G
Sbjct: 332 MKSLGLTPDEVTLAGVLSVHGQNGDLASG-RMIHCYIQDSFSDPGVTVLNSLIDMYARCG 390
Query: 362 RLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVE 397
+++ + +P++ T + W ++GA + HG +
Sbjct: 391 QVDTSISLFTEMPNKNT--ISWNVIIGALAMHGRAQ 424
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 117/239 (48%), Gaps = 6/239 (2%)
Query: 159 ARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIW 218
AR +F+ +P + ++ +I Y+ EAL L R ++ P+E T+ VL A
Sbjct: 60 ARRMFDRVPDPDRFAYNSLIRAYSNSGCPQEALCLHRDVLR-RGILPNEFTLPFVLKACS 118
Query: 219 QNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVS 278
+ + HG K G+ + V N L+ + A G + + +LF +++ R N+VS
Sbjct: 119 RARAAEHALATHGVAIKLGYVR-QVFVGNALLHSSASAGSLRDSRRLFAEMAPHR-NVVS 176
Query: 279 WTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMV 338
W ++I G A G EA F M++ G+ + TF+S+L CS G +E G M+
Sbjct: 177 WNTMIGGCAQAGETSEACALFREMRRQGVLADVFTFVSLLLVCSKEGNLEVGRLVHCHML 236
Query: 339 EECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVE 397
+ D+ L+DM G+ G L A + +P I +VV W ++L A + HG+V+
Sbjct: 237 ASGSRV-DLILGNALVDMYGKCGDLWMAHRCFDVMP--IKNVVSWTSMLCALAKHGSVD 292
>gi|242082594|ref|XP_002441722.1| hypothetical protein SORBIDRAFT_08g001305 [Sorghum bicolor]
gi|241942415|gb|EES15560.1| hypothetical protein SORBIDRAFT_08g001305 [Sorghum bicolor]
Length = 528
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 151/421 (35%), Positives = 242/421 (57%), Gaps = 13/421 (3%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
F +L+ + ++ ++A L+ + + H P D F + + +G
Sbjct: 81 FTSLMSLHLQLDNQREAISLFAR---VVAAGHRP-----DGFAVVGALSASSGAGDQVVG 132
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
+H +I ++G V V AL++MY G + + K+FD M ++ VTW M+ G +K
Sbjct: 133 RAVHGLIFRLGLDGEVVVGNALIDMYSQCGKFESAVKVFDRMSLKDEVTWGSMLHGYIKC 192
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
++ A S F+++P R+VV+WT +I G+ + + AL LF +MV E P+ +TI+ V
Sbjct: 193 AGVDSALSFFDQVPVRSVVAWTALITGHVQGRQPVRALELFGRMV-LEGHRPTHVTIVGV 251
Query: 214 LPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVER 273
L A G + ++IHGYG K + +I V N L+D YAK G I A +F++ V+
Sbjct: 252 LSACADIGALDLGRVIHGYGSKCN-ASLNIIVSNALMDMYAKSGHIEMAFSVFQE--VQS 308
Query: 274 KNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNF 333
K+ +WT++IS + G GK+A+E F M + G+ PN VTF+SVL+ACSH GL+EEG+
Sbjct: 309 KDSFTWTTMISCCTVQGDGKKALELFQDMLRAGVVPNSVTFVSVLSACSHSGLIEEGIEL 368
Query: 334 FDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFH 393
FD+M + ++ P ++HYGC+ID+LGR G LE+AE + E D+V+WR+LL AC
Sbjct: 369 FDRMRQLYKIDPLLEHYGCMIDLLGRGGLLEEAEALIADMNVE-PDIVIWRSLLSACLVR 427
Query: 394 GNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSL 453
GN + E ++I++ E G G YVL++N+ A ++ +A +R+ M FK PGCS
Sbjct: 428 GNNRLAEIAGKEIVKREPGDDGVYVLLWNMYASSNKWREAREMRQQMLSLKIFKKPGCSW 487
Query: 454 V 454
+
Sbjct: 488 I 488
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 130/272 (47%), Gaps = 34/272 (12%)
Query: 153 WGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILA 212
+G + AR LF+E+P +++S+T ++ + +++ EA++LF ++VA + P ++
Sbjct: 60 FGRVADARKLFDEIPNPDLISFTSLMSLHLQLDNQREAISLFARVVAAGH-RPDGFAVVG 118
Query: 213 VLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVE 272
L A GD + +HG + G ++ V N LID Y++CG SA K+F+ +S++
Sbjct: 119 ALSASSGAGDQVVGRAVHGLIFRLGLDG-EVVVGNALIDMYSQCGKFESAVKVFDRMSLK 177
Query: 273 R-----------------------------KNLVSWTSIISGFAMHGMGKEAVENFGRMQ 303
+++V+WT++I+G A+E FGRM
Sbjct: 178 DEVTWGSMLHGYIKCAGVDSALSFFDQVPVRSVVAWTALITGHVQGRQPVRALELFGRMV 237
Query: 304 KVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRL 363
G +P VT + VL+AC+ G ++ G +C +I L+DM ++G +
Sbjct: 238 LEGHRPTHVTIVGVLSACADIGALDLG-RVIHGYGSKCNASLNIIVSNALMDMYAKSGHI 296
Query: 364 EQAEKTALGIPSEITDVVVWRTLLGACSFHGN 395
E A + S+ D W T++ C+ G+
Sbjct: 297 EMAFSVFQEVQSK--DSFTWTTMISCCTVQGD 326
Score = 43.1 bits (100), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 74/174 (42%), Gaps = 15/174 (8%)
Query: 219 QNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVS 278
Q ++ Q IH G V + YA G + A KLF++I +L+S
Sbjct: 23 QCKKLRELQRIHALAIAHGLHPHQQSVSCKIFRCYADFGRVADARKLFDEIP--NPDLIS 80
Query: 279 WTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHG-----GLVEEGLNF 333
+TS++S +EA+ F R+ G +P+ + L+A S G GL F
Sbjct: 81 FTSLMSLHLQLDNQREAISLFARVVAAGHRPDGFAVVGALSASSGAGDQVVGRAVHGLIF 140
Query: 334 FDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLL 387
++ + EV+ LIDM + G+ E A K + + D V W ++L
Sbjct: 141 --RLGLDGEVVVG----NALIDMYSQCGKFESAVKVFDRM--SLKDEVTWGSML 186
>gi|357118276|ref|XP_003560882.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g15300-like [Brachypodium distachyon]
Length = 508
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 160/456 (35%), Positives = 242/456 (53%), Gaps = 46/456 (10%)
Query: 28 LHHSQLF--NTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCA 85
+ H LF N ++ Y+ + +P AF+LY++++ + L P DSFT+ +L+R CA
Sbjct: 57 ISHPDLFMHNVMVRGYAHSAAPAAAFVLYRRIEA------ARLKP--DSFTFCYLLRACA 108
Query: 86 TLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFL------------KD------ 127
L G Q+H + K+G+ +V AL+NM+ G L +D
Sbjct: 109 GLPGSCAGYQVHGAVVKLGYFKDAFVRNALINMHAKCGDLLVAGTLLDEAGERDVVARSA 168
Query: 128 -------------SSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSW 174
+ +LFDE ++LV WNVM+ K+GE+E AR L + P ++VVSW
Sbjct: 169 VIAGHAAKGELDIARQLFDECQHKDLVCWNVMVAAYAKYGEMEKARGLLDRAPEKDVVSW 228
Query: 175 TGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGE 234
II GYT EAL + +M C P E TI+++L G + + ++IH
Sbjct: 229 NTIITGYTAKGLLKEALEVLDEM-RCVGLMPDEATIVSLLSCCANLGSLGTGRMIHSL-H 286
Query: 235 KRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKE 294
G I N L+ YAKCG + +A ++F ++ +++ +W SII G A HG ++
Sbjct: 287 LEGRPCISILPGNALVSMYAKCGDVQAAMEVFS--RMKERDVWTWNSIIGGLAFHGQAEQ 344
Query: 295 AVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLI 354
+V+ F +M GL PN ++FL VL ACSH GLVE+G +F M+ + P+ +HY C++
Sbjct: 345 SVQFFNKMLDEGLCPNEISFLCVLGACSHAGLVEDGQRYFSLMINRYRIEPNARHYSCIV 404
Query: 355 DMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYG 414
DMLGR+G L++A + E VV+WRTLLGAC HG+V +G+ ++L+M
Sbjct: 405 DMLGRSGLLDEAFAIVSSMRCEPA-VVIWRTLLGACRIHGDVALGKLARERLLKMNEDAS 463
Query: 415 GDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPG 450
GDYVL+ I A + E +R MDER KV G
Sbjct: 464 GDYVLLSGIYASCDEWFGVETVRGSMDERGIRKVAG 499
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 75/320 (23%), Positives = 127/320 (39%), Gaps = 75/320 (23%)
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
G +++AR +F+ + ++ ++ GY A L+R++ A +P T +
Sbjct: 45 GGMDYARKVFDGISHPDLFMHNVMVRGYAHSAAPAAAFVLYRRIEAAR-LKPDSFTFCYL 103
Query: 214 LPAIWQNGDVKSCQ--LIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFE---- 267
L A G SC +HG K G+ D V N LI+ +AKCG + A L +
Sbjct: 104 LRAC--AGLPGSCAGYQVHGAVVKLGYFK-DAFVRNALINMHAKCGDLLVAGTLLDEAGE 160
Query: 268 -------------------DIS------VERKNLVSW----------------------- 279
DI+ + K+LV W
Sbjct: 161 RDVVARSAVIAGHAAKGELDIARQLFDECQHKDLVCWNVMVAAYAKYGEMEKARGLLDRA 220
Query: 280 --------TSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGL 331
+II+G+ G+ KEA+E M+ VGL P+ T +S+L+ C++ G + G
Sbjct: 221 PEKDVVSWNTIITGYTAKGLLKEALEVLDEMRCVGLMPDEATIVSLLSCCANLGSLGTGR 280
Query: 332 NFFDKMVE--EC-EVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLG 388
+E C +LP L+ M + G ++ A + + DV W +++G
Sbjct: 281 MIHSLHLEGRPCISILPG----NALVSMYAKCGDVQAAMEVFSRMKER--DVWTWNSIIG 334
Query: 389 ACSFHGNVEMGERVTRKILE 408
+FHG E + K+L+
Sbjct: 335 GLAFHGQAEQSVQFFNKMLD 354
>gi|147817753|emb|CAN66661.1| hypothetical protein VITISV_031721 [Vitis vinifera]
Length = 569
Score = 269 bits (687), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 163/474 (34%), Positives = 268/474 (56%), Gaps = 34/474 (7%)
Query: 3 ILQNSQTPNNITTQIHSHLLTTNSLLHHSQLF-----------NTLLHFYSLAESPQKAF 51
I+ N + ++ S +T+ +LL+ ++F N ++ +S +E+P K
Sbjct: 58 IVNGFSQKNFLLVKLLSFYITSGNLLNAHKVFERIENPSTTVWNQMIRGHSQSETPHKLV 117
Query: 52 LLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYV 111
LY ++ + + P + FTYSFLI CA G Q+H + G+ ++V+V
Sbjct: 118 ELYNRMVE------AEAEP--NEFTYSFLIGGCARSXLLREGEQVHGRVVANGYCTNVFV 169
Query: 112 NTALVNMYVSLGF---LKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPC 168
T+LVN+Y G ++ + ++FDE+ +RN+V+WN ++ G V+ G+++ AR +F+EMP
Sbjct: 170 RTSLVNLYAIAGGYDGVRKARRVFDEIVDRNIVSWNSLLAGYVRCGDVDGARRIFDEMPE 229
Query: 169 RNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQL 228
RNVVSWT +I G ++ R +AL LF +M + ++ ++A L A + GD+K
Sbjct: 230 RNVVSWTTMIAGCAQIGRCKQALHLFHEMRRAG-VKLDQVALVAALSACAELGDLKLGTW 288
Query: 229 IHGYGEKR---GFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISG 285
IH Y ++R G + + N LI YA CG I A K+F I +++++ +SWTS+I+G
Sbjct: 289 IHSYIDERLHAGNQPLLVSLNNSLIHMYASCGVIDKAYKVF--IGMQQRSTISWTSMITG 346
Query: 286 FAMHGMGKEAVENFGRMQKVGL---KPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECE 342
FA G +EA+ F MQ++G +P+ +TF+ VL ACSH G V++G +FF+ M ++
Sbjct: 347 FAKQGHAEEALGVFQWMQRLGTDEGRPDGITFIGVLCACSHAGFVDQGRHFFECMNKKWG 406
Query: 343 VLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERV 402
++P I+HYGC++D+L RAG L++A + +P + D VW LLG C H N E+ V
Sbjct: 407 IVPRIEHYGCMVDLLSRAGFLDEAHRLXESMPMKPND-AVWGALLGGCRIHKNAELASHV 465
Query: 403 TRK-ILEMERGYGGDY-VLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
+K +LE++ Y VL+ N+ A R+ D +R+ M E K G S V
Sbjct: 466 AQKLVLELKPDQAAGYLVLLSNVYATAKRWQDVALVRQKMVEIGVRKPAGRSWV 519
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 80/329 (24%), Positives = 148/329 (44%), Gaps = 31/329 (9%)
Query: 83 TCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVT 142
TC T+ Q+H I GF ++ L++ Y++ G L ++ K+F+ + +
Sbjct: 43 TCDTIKKLK---QIHTQIIVNGFSQKNFLLVKLLSFYITSGNLLNAHKVFERIENPSTTV 99
Query: 143 WNVMITGLVKWGE----LEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMV 198
WN MI G + +E + E N +++ +I G R E + ++V
Sbjct: 100 WNQMIRGHSQSETPHKLVELYNRMVEAEAEPNEFTYSFLIGGCARSXLLREGEQVHGRVV 159
Query: 199 ACEY-TEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFD------IRVLNCLID 251
A Y T T L L AI D G ++ FD I N L+
Sbjct: 160 ANGYCTNVFVRTSLVNLYAIAGGYD----------GVRKARRVFDEIVDRNIVSWNSLLA 209
Query: 252 TYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNR 311
Y +CG + A ++F+++ +N+VSWT++I+G A G K+A+ F M++ G+K ++
Sbjct: 210 GYVRCGDVDGARRIFDEMP--ERNVVSWTTMIAGCAQIGRCKQALHLFHEMRRAGVKLDQ 267
Query: 312 VTFLSVLNACSHGGLVEEGL---NFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEK 368
V ++ L+AC+ G ++ G ++ D+ + + LI M G +++A K
Sbjct: 268 VALVAALSACAELGDLKLGTWIHSYIDERLHAGNQPLLVSLNNSLIHMYASCGVIDKAYK 327
Query: 369 TALGIPSEITDVVVWRTLLGACSFHGNVE 397
+G+ T + W +++ + G+ E
Sbjct: 328 VFIGMQQRST--ISWTSMITGFAKQGHAE 354
>gi|225450622|ref|XP_002278152.1| PREDICTED: pentatricopeptide repeat-containing protein At1g09190
[Vitis vinifera]
Length = 485
Score = 269 bits (687), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 157/468 (33%), Positives = 265/468 (56%), Gaps = 30/468 (6%)
Query: 2 HILQNSQTPNNITTQIHSHLLT----------TNSLLHHSQ-----LFNTLLHFYSLAES 46
HIL++ +N QI SH ++ N + H +Q LFN+++ YSL
Sbjct: 31 HILRHHLHQSN---QILSHFISVCGALDKMGYANLVFHQTQNPNLLLFNSMIKGYSLCGP 87
Query: 47 PQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQ 106
+ + LL+ Q++ + + P D FT++ L+++C+ + +G +H V+ VGF+
Sbjct: 88 SENSLLLFSQMK------NRGIWP--DEFTFAPLLKSCSGICDNRIGKGVHGVVIVVGFE 139
Query: 107 SHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEM 166
+ ++++Y S G ++D+ K+FDEM +R+++ WN+MI G K G++E LF +M
Sbjct: 140 RFSSIRIGIIDLYTSCGRMEDAKKVFDEMLDRDVIVWNMMIRGFCKVGDIEMGFRLFRQM 199
Query: 167 PCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSC 226
R+VVSW +I G + R EAL LFR+M + EP + T++ +LP + G V
Sbjct: 200 RDRSVVSWNSMIAGLEQSGRDGEALELFREMWDHGF-EPDDATVVTILPVCARLGAVDVG 258
Query: 227 QLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGF 286
+ IH Y E I V N L+D Y KCG + +A ++F ++ +KN+VSW ++ISG
Sbjct: 259 EWIHSYAESSRLLRDFISVGNSLVDFYCKCGILETAWRVFNEMP--QKNVVSWNAMISGL 316
Query: 287 AMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPD 346
+G G+ + F M G++PN TF+ VL+ C+H GLVE G N F M + ++ P
Sbjct: 317 TFNGKGELGADLFEEMINKGVRPNDATFVGVLSCCAHAGLVERGRNLFTSMTVDHKMEPK 376
Query: 347 IKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKI 406
++H+GC++D+L R G +E+A +P + V+W +LL A G+V+ E +++
Sbjct: 377 LEHFGCMVDLLARNGCMEEARDLVRTMPMR-PNAVLWGSLLSAYRTIGDVKHAECAVKEL 435
Query: 407 LEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
+E+E G+YVL+ N+ A G++ + E++R +M E+N K PG S+V
Sbjct: 436 IELEPWNSGNYVLLSNVYAEDGKWDEVEKVRALMKEKNIRKNPGQSMV 483
>gi|224096022|ref|XP_002310520.1| predicted protein [Populus trichocarpa]
gi|222853423|gb|EEE90970.1| predicted protein [Populus trichocarpa]
Length = 710
Score = 269 bits (687), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 152/388 (39%), Positives = 227/388 (58%), Gaps = 10/388 (2%)
Query: 73 DSFTYSFLIRTCATLSHPNLGTQLHA-VISKVGFQSHVYVNTALVNMYVSLGFLKDSSKL 131
D T + ++ CATL+ G Q+HA V+ F++ + + ALV+MY G + ++ +
Sbjct: 256 DEVTLASVVSACATLAAFKEGVQIHARVVKSDKFRNDLILGNALVDMYAKCGRVNEARCV 315
Query: 132 FDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEAL 191
FD MP RN V+ M++G K ++ ARS+F + +++VSW +I GYT+ + EAL
Sbjct: 316 FDRMPVRNAVSETTMVSGYAKSASVKAARSMFATIKQKDIVSWNALIAGYTQNGENEEAL 375
Query: 192 ALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGF-----TAFDIRVL 246
LFR M+ E P+ T +L A D++ + H + K GF DI V
Sbjct: 376 GLFR-MLKRESVCPTHYTFGNLLNASANLADLELGRQAHSHVVKHGFRFQSGEEPDIFVG 434
Query: 247 NCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVG 306
N LID Y KCG + ++FE++ VE K+ VSW ++I G+A +G G EA+E F +M + G
Sbjct: 435 NSLIDMYMKCGSVEEGLRVFENM-VE-KDHVSWNTMIIGYAQNGYGMEALELFQKMLESG 492
Query: 307 LKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQA 366
KP+ VT + L ACSH GLVEEG +F M +E +LP HY C++D+LGRAG LE+A
Sbjct: 493 EKPDHVTMIGTLCACSHAGLVEEGRRYFFSMTKEHGLLPVKDHYTCMVDLLGRAGCLEEA 552
Query: 367 EKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAG 426
+ +P + D VVW +LL AC H N+ +G+ V KI E++ G YVL+ N+ +
Sbjct: 553 KDLIESMPKQ-PDAVVWSSLLSACKVHRNITLGKYVAEKIFEIDPTSSGPYVLLANMYSE 611
Query: 427 VGRFGDAERLRRVMDERNAFKVPGCSLV 454
+GR+GDA +R++M R K PGCS +
Sbjct: 612 LGRWGDAVSVRKLMRRRGVVKQPGCSWI 639
Score = 158 bits (399), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 90/294 (30%), Positives = 163/294 (55%), Gaps = 4/294 (1%)
Query: 73 DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLF 132
DS ++ L+ C L +H + + F V++ L+++Y G+L + K+F
Sbjct: 23 DSSPFAKLLDLCVKLRSSRDARSVHGRLIQTPFCEEVFIQNRLIDVYGKCGYLDYARKVF 82
Query: 133 DEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALA 192
D M ERN+ ++N +I+ L++WG ++ + LF MP ++ SW +I G+ + +R EAL
Sbjct: 83 DRMSERNVFSFNSIISTLMRWGFVDESAWLFSLMPEKDQCSWNSMIAGFAQHDRFEEALD 142
Query: 193 LFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDT 252
F +M ++ ++ + + L A + D+K IHG K ++ D+ + + LID
Sbjct: 143 WFVRMHRDDFV-LNDYSFGSGLSACSRLKDLKLGAQIHGLISKSKYS-LDVFMGSGLIDF 200
Query: 253 YAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRV 312
Y+KCG + A ++F+ +E KN+VSW +I+ + +G EA+E FGRM ++G KP+ V
Sbjct: 201 YSKCGLVGCARRVFD--GMEEKNVVSWNCLITCYEQNGPAIEALEAFGRMTELGFKPDEV 258
Query: 313 TFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQA 366
T SV++AC+ +EG+ ++V+ + D+ L+DM + GR+ +A
Sbjct: 259 TLASVVSACATLAAFKEGVQIHARVVKSDKFRNDLILGNALVDMYAKCGRVNEA 312
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 98/408 (24%), Positives = 174/408 (42%), Gaps = 82/408 (20%)
Query: 71 LFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSK 130
+ + +++ + C+ L LG Q+H +ISK + V++ + L++ Y G + + +
Sbjct: 153 VLNDYSFGSGLSACSRLKDLKLGAQIHGLISKSKYSLDVFMGSGLIDFYSKCGLVGCARR 212
Query: 131 LFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEA 190
+FD M E+N+V+WN +IT C Y + + EA
Sbjct: 213 VFDGMEEKNVVSWNCLIT-------------------C------------YEQNGPAIEA 241
Query: 191 LALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLI 250
L F +M + +P E+T+ +V+ A K IH K D+ + N L+
Sbjct: 242 LEAFGRMTELGF-KPDEVTLASVVSACATLAAFKEGVQIHARVVKSDKFRNDLILGNALV 300
Query: 251 DTYAKCGCIFSASKLFEDI-----------------------------SVERKNLVSWTS 281
D YAKCG + A +F+ + ++++K++VSW +
Sbjct: 301 DMYAKCGRVNEARCVFDRMPVRNAVSETTMVSGYAKSASVKAARSMFATIKQKDIVSWNA 360
Query: 282 IISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNAC-----------SHGGLVEEG 330
+I+G+ +G +EA+ F +++ + P TF ++LNA +H +V+ G
Sbjct: 361 LIAGYTQNGENEEALGLFRMLKRESVCPTHYTFGNLLNASANLADLELGRQAHSHVVKHG 420
Query: 331 LNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGAC 390
F + EE PDI LIDM + G +E+ + + + D V W T++
Sbjct: 421 FRF--QSGEE----PDIFVGNSLIDMYMKCGSVEEGLRVFENMVEK--DHVSWNTMIIGY 472
Query: 391 SFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRR 438
+ +G + +K+L E G D+V M L G E RR
Sbjct: 473 AQNGYGMEALELFQKML--ESGEKPDHVTMIGTLCACSHAGLVEEGRR 518
>gi|297727555|ref|NP_001176141.1| Os10g0400250 [Oryza sativa Japonica Group]
gi|13940614|gb|AAK50416.1|AC021891_17 Putative selenium-binding protein-like [Oryza sativa Japonica
Group]
gi|31431939|gb|AAP53645.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|125574711|gb|EAZ15995.1| hypothetical protein OsJ_31439 [Oryza sativa Japonica Group]
gi|255679385|dbj|BAH94869.1| Os10g0400250 [Oryza sativa Japonica Group]
Length = 651
Score = 268 bits (686), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 149/421 (35%), Positives = 233/421 (55%), Gaps = 11/421 (2%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+NTL+ Y +P +A L+ ++ + + P D T + C + LG
Sbjct: 194 WNTLIGGYVRRGNPAEALELFWRM----VAEDAVVRP--DEVTMIAAVSGCGQMRDLELG 247
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
+LH + G V + AL++MY+ G L+ + +F+ + R +V+W MI G K+
Sbjct: 248 RRLHGFVDSDGVSCTVRLMNALMDMYIKCGSLEMAKSVFERIEHRTVVSWTTMIVGFAKF 307
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
G ++ AR +F+EMP R+V W ++ GY + + EAL+LF +M P EIT++ +
Sbjct: 308 GLMDDARKVFDEMPERDVFPWNALMTGYVQCKQCKEALSLFHEMQEASVV-PDEITMVNL 366
Query: 214 LPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVER 273
L A Q G ++ +H Y EK F + + LID YAKCG I A +F++I
Sbjct: 367 LTACSQLGALEMGMWVHRYIEKHRLV-FSVALGTSLIDMYAKCGNIEKAIHIFKEIP--E 423
Query: 274 KNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNF 333
KN ++WT++I G A HG EA+E+F M ++G KP+ +TF+ VL+AC H GLV+EG F
Sbjct: 424 KNALTWTAMICGLANHGHANEAIEHFRTMIELGQKPDEITFIGVLSACCHAGLVKEGREF 483
Query: 334 FDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFH 393
F M + + +KHY C+ID+LGRAG L++AE+ +P E D VVW + AC
Sbjct: 484 FSLMETKYHLERKMKHYSCMIDLLGRAGHLDEAEQLVNTMPME-PDAVVWGAIFFACRMQ 542
Query: 394 GNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSL 453
GN+ +GE+ K++E++ G YVL+ N+ A A+++R +M KVPGCS
Sbjct: 543 GNISLGEKAAMKLVEIDPSDSGIYVLLANMYAEANMRKKADKVRAMMRHLGVEKVPGCSC 602
Query: 454 V 454
+
Sbjct: 603 I 603
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 103/391 (26%), Positives = 176/391 (45%), Gaps = 71/391 (18%)
Query: 73 DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLF 132
D T+ FL++ CA L G A + ++G S V+V A + ++S+
Sbjct: 124 DHLTFPFLLKACARLREWGYGDAALAHVLRLGLDSDVFVVNAATH-FLSIR--------- 173
Query: 133 DEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALA 192
G +E AR LF+ P R++VSW +I GY R EAL
Sbjct: 174 ---------------------GPMEDARRLFDRSPVRDLVSWNTLIGGYVRRGNPAEALE 212
Query: 193 LFRKMVACE-YTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLID 251
LF +MVA + P E+T++A + Q D++ + +HG+ + G + +R++N L+D
Sbjct: 213 LFWRMVAEDAVVRPDEVTMIAAVSGCGQMRDLELGRRLHGFVDSDGVSC-TVRLMNALMD 271
Query: 252 TYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGM-------------------- 291
Y KCG + A +FE I E + +VSWT++I GFA G+
Sbjct: 272 MYIKCGSLEMAKSVFERI--EHRTVVSWTTMIVGFAKFGLMDDARKVFDEMPERDVFPWN 329
Query: 292 -----------GKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEE 340
KEA+ F MQ+ + P+ +T +++L ACS G +E G+ + + +E+
Sbjct: 330 ALMTGYVQCKQCKEALSLFHEMQEASVVPDEITMVNLLTACSQLGALEMGM-WVHRYIEK 388
Query: 341 CEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGE 400
++ + LIDM + G +E+A IP + + + W ++ + HG+
Sbjct: 389 HRLVFSVALGTSLIDMYAKCGNIEKAIHIFKEIPEK--NALTWTAMICGLANHGHANEAI 446
Query: 401 RVTRKILEMERGYGGDYVLMYNILAGVGRFG 431
R ++E+ G D + +L+ G
Sbjct: 447 EHFRTMIEL--GQKPDEITFIGVLSACCHAG 475
>gi|224124674|ref|XP_002330082.1| predicted protein [Populus trichocarpa]
gi|222871507|gb|EEF08638.1| predicted protein [Populus trichocarpa]
Length = 665
Score = 268 bits (686), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 157/453 (34%), Positives = 238/453 (52%), Gaps = 44/453 (9%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNL 92
+FN ++ P KA Y ++ + H+ + FTY L + C
Sbjct: 97 VFNIIIKGCLQNNEPCKAICCYYKM--MIAHARP------NKFTYPTLFKACTAAEAAEE 148
Query: 93 GTQLHAVISKVGFQSHVYVNTALVNMYVSLG--------------------------FLK 126
G Q+HA + K G V++ +A + MY S G +LK
Sbjct: 149 GVQVHAHVIKQGLSGDVHIRSAGIQMYGSFGEVEGARRMLGEDGNSDVICFNAMIDGYLK 208
Query: 127 -----DSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGY 181
+ +LF M ++N+ +WNVM++G+ K G +E AR LF EM +N +SW+ +IDGY
Sbjct: 209 CGEVEAAKELFWSMEDKNVGSWNVMVSGMAKCGMIEEARELFNEMKEKNEISWSAMIDGY 268
Query: 182 TRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAF 241
+ EAL +F M E P + + +VL A G + + IH Y +F
Sbjct: 269 IKGGYYKEALEVFNVMQR-EEIRPRKFVLSSVLAACANLGALDQGRWIHAYVNNNS-NSF 326
Query: 242 DIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGR 301
D + L+D YAKCG + A +FE + E+K + +W ++I G MHG ++A+E F +
Sbjct: 327 DAVLGTALVDMYAKCGRLDMAWDVFEKM--EKKEVFTWNAMICGLGMHGRAEDAIELFFK 384
Query: 302 MQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAG 361
MQK +PN +T L VL+AC+H G+V+EGL F+ M E + P ++HYGC++D+LGRAG
Sbjct: 385 MQKQKFRPNGITLLGVLSACAHSGMVDEGLRIFNSMEEVYGIEPGMEHYGCVVDLLGRAG 444
Query: 362 RLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMY 421
L +AE+ +P E + VW LLGAC HG+VE+GERV + +LE+E G Y L+
Sbjct: 445 LLGEAEEVMYSMPMEPS-AAVWGALLGACRKHGDVELGERVGKILLELEPQNSGRYALLS 503
Query: 422 NILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
NI A GR+ D +R++M ER G S++
Sbjct: 504 NIYARAGRWDDVANVRKLMKERGVKTSTGISMI 536
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 93/348 (26%), Positives = 150/348 (43%), Gaps = 64/348 (18%)
Query: 95 QLHAVISKVG-FQSHVYVNTALVNMYVSLGF--LKDSSKLFDEMPERNLVTWNVMITGLV 151
Q+HAV + G FQ H YV+ LV Y + F L + K+F+ +P N+ +N++I G +
Sbjct: 48 QVHAVALRTGHFQDH-YVSGTLVKCYANPHFSNLNFALKVFEYVPNPNVFVFNIIIKGCL 106
Query: 152 KWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITIL 211
+ E PC+ + + ++ + R N+ LF+ AC E +E +
Sbjct: 107 QNNE-----------PCKAICCYYKMMIAHARPNKFTYP-TLFK---ACTAAEAAEEGVQ 151
Query: 212 AVLPAIWQ--NGDV----KSCQLIHGYGEKRGFTAF-------DIRVLNCLIDTYAKCGC 258
I Q +GDV Q+ +GE G D+ N +ID Y KCG
Sbjct: 152 VHAHVIKQGLSGDVHIRSAGIQMYGSFGEVEGARRMLGEDGNSDVICFNAMIDGYLKCGE 211
Query: 259 IFSASKLF---EDISV--------------------------ERKNLVSWTSIISGFAMH 289
+ +A +LF ED +V + KN +SW+++I G+
Sbjct: 212 VEAAKELFWSMEDKNVGSWNVMVSGMAKCGMIEEARELFNEMKEKNEISWSAMIDGYIKG 271
Query: 290 GMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKH 349
G KEA+E F MQ+ ++P + SVL AC++ G +++G + V D
Sbjct: 272 GYYKEALEVFNVMQREEIRPRKFVLSSVLAACANLGALDQG-RWIHAYVNNNSNSFDAVL 330
Query: 350 YGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVE 397
L+DM + GRL+ A + E +V W ++ HG E
Sbjct: 331 GTALVDMYAKCGRLDMAWDVFEKM--EKKEVFTWNAMICGLGMHGRAE 376
>gi|449531466|ref|XP_004172707.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like, partial [Cucumis sativus]
Length = 610
Score = 268 bits (686), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 137/340 (40%), Positives = 211/340 (62%), Gaps = 4/340 (1%)
Query: 115 LVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSW 174
+V+ Y+ +G +K + KLFD MP R+ ++WN M+ G G++E LFEEMP RNV SW
Sbjct: 226 MVSGYIEIGDMKAARKLFDTMPYRDTMSWNTMLNGYANNGDVEACEQLFEEMPERNVFSW 285
Query: 175 TGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGE 234
G+I GY E L F++M+ P++ T++ VL A + G + + +H Y
Sbjct: 286 NGLIGGYAHNGCFFEVLRCFKRMLIDGLVVPNDATLVTVLSACARLGALDLGKWVHVYAA 345
Query: 235 KRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKE 294
GF I V N LID Y+KCG I +A ++FE S++ K+L++W S+I G A HG G +
Sbjct: 346 TIGFKG-SIYVGNALIDMYSKCGLIENAMEVFE--SMDLKDLITWNSMICGLATHGCGAD 402
Query: 295 AVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLI 354
A+ F +M+ G KP+ +TF+ VL +C+H GLVEEG ++F+ MV E + P I+HYGC++
Sbjct: 403 ALTLFHQMKINGEKPDGITFIGVLCSCTHLGLVEEGTSYFNSMVNEYSIAPQIEHYGCMV 462
Query: 355 DMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYG 414
D+ GRAG L++A + +P E D V+W LLGAC + N+++ E +K++ +E
Sbjct: 463 DLFGRAGLLDRAIEFVKRMPME-ADAVIWAALLGACRIYKNIDLAELALQKLIVLEPKNP 521
Query: 415 GDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
+YVL+ NI +GR+ D RL+ +M + + K+PGCSL+
Sbjct: 522 ANYVLLSNIYGDLGRWKDVARLKILMRDTGSKKLPGCSLI 561
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 92/388 (23%), Positives = 154/388 (39%), Gaps = 87/388 (22%)
Query: 52 LLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYV 111
LL ++ ++ +S P + L+R+C T++ L ++ A I GFQ + YV
Sbjct: 3 LLSGKIAKLLLYSAQKHPRWVLEEHFISLLRSCKTVA---LLQKVQAQIITHGFQYNGYV 59
Query: 112 NTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNV 171
+V +V L ++ AR LF+ P V
Sbjct: 60 APNVVTSWVGLK-------------------------------QMAHARHLFDHFPDPKV 88
Query: 172 VSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQ-----NGDVKSC 226
W I GY E + LF KM + + P+ T VL + + G+ C
Sbjct: 89 ELWNAISRGYFHNAFYREVVFLFGKMKSMD-VRPNCFTFPLVLKSCAKIGAFVEGEEIHC 147
Query: 227 QLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGF 286
++I G E F A LID Y+ I SA KLF + + +N+V+WTS+ISG+
Sbjct: 148 EVIKGGLEGNQFVA------TTLIDVYSGGRAIGSAYKLF--VGMLERNIVAWTSMISGY 199
Query: 287 AMHGMGKEAVENF----------------GRMQKVGLKPNR-----------VTFLSVLN 319
+ A F G ++ +K R +++ ++LN
Sbjct: 200 ILCNRVALARRLFDLAPERDVVLWNIMVSGYIEIGDMKAARKLFDTMPYRDTMSWNTMLN 259
Query: 320 ACSHGGLVEEGLNFFDKMVEE-----CEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIP 374
++ G VE F++M E ++ H GC ++L R+ L +P
Sbjct: 260 GYANNGDVEACEQLFEEMPERNVFSWNGLIGGYAHNGCFFEVLRCFKRMLI---DGLVVP 316
Query: 375 SEITDVVVWRTLLGACSFHGNVEMGERV 402
++ T V T+L AC+ G +++G+ V
Sbjct: 317 NDATLV----TVLSACARLGALDLGKWV 340
Score = 43.1 bits (100), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 75/181 (41%), Gaps = 24/181 (13%)
Query: 266 FEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGG 325
F D VE W +I G+ + +E V FG+M+ + ++PN TF VL +C+ G
Sbjct: 83 FPDPKVEL-----WNAISRGYFHNAFYREVVFLFGKMKSMDVRPNCFTFPLVLKSCAKIG 137
Query: 326 LVEEGLNFFDKMVEECEVLPDIKH-----YGCLIDMLGRAGRLEQAEKTALGIPSEITDV 380
EG CEV+ LID+ + A K +G+ ++
Sbjct: 138 AFVEGEEI------HCEVIKGGLEGNQFVATTLIDVYSGGRAIGSAYKLFVGMLER--NI 189
Query: 381 VVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVM 440
V W +++ V + R+ L ER D VL +++G GD + R++
Sbjct: 190 VAWTSMISGYILCNRVALARRLFD--LAPER----DVVLWNIMVSGYIEIGDMKAARKLF 243
Query: 441 D 441
D
Sbjct: 244 D 244
>gi|147799847|emb|CAN66059.1| hypothetical protein VITISV_017037 [Vitis vinifera]
Length = 546
Score = 268 bits (686), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 164/497 (32%), Positives = 257/497 (51%), Gaps = 62/497 (12%)
Query: 4 LQNSQTPNNITTQIHSHLLTTNSLLHHSQLFNTLLHFYSLAESPQKAFLLYKQLQQIYTH 63
L NS + + TT + + + + +++L +NT + YS S L+ ++++
Sbjct: 66 LCNSLSNFSYTTSVFNGVSSPSTVL-----WNTYIKGYSENYSVSLTVSLFIRMKR---- 116
Query: 64 SHSPLPPLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMY---- 119
+P D FTY LI+ C+ + G H + G V+V T+L+++Y
Sbjct: 117 -SDAVP---DKFTYPSLIKACSKVCGVKEGVAFHGSAVRCGVGGDVFVMTSLIDLYGKCG 172
Query: 120 ---------------------------VSLGFLKDSSKLFDEMPERNLVTWNVMITGLVK 152
S L ++ KLFDEMPE+N V+WN +I+G VK
Sbjct: 173 EILCARKVFDEMGERNVVSWTAMIAGYASFSDLVEARKLFDEMPEKNAVSWNAIISGYVK 232
Query: 153 WGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALF-----RKMVA-------- 199
G+L AR +F+EMP RNVVS+T +IDGY + A +F R +VA
Sbjct: 233 CGDLRSARKMFDEMPHRNVVSFTTMIDGYAKSGDMASARFVFEEAPERDVVAWSALIFRV 292
Query: 200 -CEY-TEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCG 257
E+ +P E +++++ A Q G ++ + + Y K V+ LID AKCG
Sbjct: 293 CAEWNVKPDEFIMVSLMSACSQMGSLELAKWVDDYVRKSSIDVHRAHVIAALIDMNAKCG 352
Query: 258 CIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSV 317
+ A+KLFE++ +++L+S+ S++ G ++HG G +AV F RM GL P+ V F +
Sbjct: 353 SMDRATKLFEEM--PKRDLISYCSMMQGLSIHGCGPQAVSLFSRMLNEGLTPDDVAFTVI 410
Query: 318 LNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEI 377
L ACS GLV+EG +F+ M + ++P HY C++D+LGRAGRL++A + +P E
Sbjct: 411 LTACSRAGLVDEGCYYFESMKTDYSIVPSPDHYACMVDLLGRAGRLKEAYELLKSMPVE- 469
Query: 378 TDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLR 437
W LLGAC H ++E+GE V ++ E+E G+YVL+ NI A ++ D LR
Sbjct: 470 PHAGAWGALLGACKLHCDIELGEVVADQLFELEPQNAGNYVLLSNIYAAAEQWLDVSLLR 529
Query: 438 RVMDERNAFKVPGCSLV 454
M ER K+PGCS +
Sbjct: 530 NKMRERGIRKIPGCSWI 546
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 82/336 (24%), Positives = 139/336 (41%), Gaps = 52/336 (15%)
Query: 68 LPPL--FDSFT-YSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGF 124
LP L FD+ + S L++ C T S Q+HA I + G ++ + + + SL
Sbjct: 16 LPTLRSFDTTSSISTLLKACTTTSTLE---QVHARIIRKGLHQDHFLISQFLTLCNSLSN 72
Query: 125 LKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRM 184
++ +F+ + + V WN I G + + SLF RM
Sbjct: 73 FSYTTSVFNGVSSPSTVLWNTYIKGYSENYSVSLTVSLF------------------IRM 114
Query: 185 NRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIR 244
RS+ P + T +++ A + VK HG + G D+
Sbjct: 115 KRSDAV--------------PDKFTYPSLIKACSKVCGVKEGVAFHGSAVRCGVGG-DVF 159
Query: 245 VLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQK 304
V+ LID Y KCG I A K+F+++ +N+VSWT++I+G+A EA + F M
Sbjct: 160 VMTSLIDLYGKCGEILCARKVFDEMG--ERNVVSWTAMIAGYASFSDLVEARKLFDEMP- 216
Query: 305 VGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLE 364
+ N V++ ++++ G + FD+M ++ + +ID ++G +
Sbjct: 217 ---EKNAVSWNAIISGYVKCGDLRSARKMFDEMPHR-----NVVSFTTMIDGYAKSGDMA 268
Query: 365 QAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGE 400
A P DVV W L+ NV+ E
Sbjct: 269 SARFVFEEAPER--DVVAWSALIFRVCAEWNVKPDE 302
>gi|356527575|ref|XP_003532384.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g61800-like [Glycine max]
Length = 577
Score = 268 bits (686), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 154/422 (36%), Positives = 238/422 (56%), Gaps = 14/422 (3%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
FNTL+ ++L SP A L+ L+++ LPP D T+ F+++ A L +L
Sbjct: 77 FNTLIRIHTLLLSPLPALHLFSTLRRL------SLPP--DFHTFPFVLKASAQLHSLSLA 128
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
LH+ K G ++ L+ +Y + D+ KLF E P ++V++N +I GLVK
Sbjct: 129 QSLHSQALKFGLLPDLFSLNTLIGVYSIHHRVNDAHKLFYECPHGDVVSYNALIHGLVKT 188
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
++ AR LF+EMP R+ +SW +I GY+ + N+A+ LF +M+ E +P I +++V
Sbjct: 189 RQISRARELFDEMPVRDEISWGTMIAGYSHLKLCNQAIELFNEMMRLE-VKPDNIALVSV 247
Query: 214 LPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVER 273
L A Q G+++ ++H Y KR D + L+D YAKCGC+ +A +FE S
Sbjct: 248 LSACAQLGELEQGSIVHDY-IKRNRIRVDSYLATGLVDLYAKCGCVETARDVFE--SCME 304
Query: 274 KNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNF 333
K + +W +++ GFA+HG G +E F RM G+KP+ VT L VL CSH GLV E
Sbjct: 305 KYVFTWNAMLVGFAIHGEGSMVLEYFSRMVSEGVKPDGVTLLGVLVGCSHAGLVLEARRI 364
Query: 334 FDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFH 393
FD+M V + KHYGC+ DML RAG +E+ + +PS DV W LLG C H
Sbjct: 365 FDEMENVYGVKREGKHYGCMADMLARAGLIEEGVEMVKAMPSG-GDVFAWGGLLGGCRIH 423
Query: 394 GNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMD-ERNAFKVPGCS 452
GNVE+ ++ ++++E++ GG Y +M NI A ++ D ++RR + + A K+ G S
Sbjct: 424 GNVEVAKKAAQQVMEIKPEDGGVYSVMANIYAHTEQWDDLVKVRRSLSANKRAKKITGRS 483
Query: 453 LV 454
L+
Sbjct: 484 LI 485
>gi|225457355|ref|XP_002281803.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 553
Score = 268 bits (686), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 163/474 (34%), Positives = 268/474 (56%), Gaps = 34/474 (7%)
Query: 3 ILQNSQTPNNITTQIHSHLLTTNSLLHHSQLF-----------NTLLHFYSLAESPQKAF 51
I+ N + ++ S +T+ +LL+ ++F N ++ +S +E+P K
Sbjct: 42 IVNGFSQKNFLLVKLLSFYITSGNLLNAHKVFERIENPSTTVWNQMIRGHSQSETPHKLV 101
Query: 52 LLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYV 111
LY ++ + + P + FTYSFLI CA G Q+H + G+ ++V+V
Sbjct: 102 ELYNRMVE------AEAEP--NEFTYSFLIGGCARSRLLREGEQVHGRVVANGYCTNVFV 153
Query: 112 NTALVNMYVSLGF---LKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPC 168
T+LVN+Y G ++ + ++FDE+ +RN+V+WN ++ G V+ G+++ AR +F+EMP
Sbjct: 154 RTSLVNLYAIAGGYDGVRKARRVFDEIVDRNIVSWNSLLAGYVRCGDVDGARRIFDEMPE 213
Query: 169 RNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQL 228
RNVVSWT +I G ++ R +AL LF +M + ++ ++A L A + GD+K
Sbjct: 214 RNVVSWTTMIAGCAQIGRCKQALHLFHEMRRAG-VKLDQVALVAALSACAELGDLKLGTW 272
Query: 229 IHGYGEKR---GFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISG 285
IH Y ++R G + + N LI YA CG I A K+F I +++++ +SWTS+I+G
Sbjct: 273 IHSYIDERLHAGNQPLLVSLNNSLIHMYASCGVIDKAYKVF--IGMQQRSTISWTSMITG 330
Query: 286 FAMHGMGKEAVENFGRMQKVGL---KPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECE 342
FA G +EA+ F MQ++G +P+ +TF+ VL ACSH G V++G +FF+ M ++
Sbjct: 331 FAKQGHAEEALGVFQWMQRLGTDEGRPDGITFIGVLCACSHAGFVDQGRHFFECMNKKWG 390
Query: 343 VLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERV 402
++P I+HYGC++D+L RAG L++A + +P + D VW LLG C H N E+ V
Sbjct: 391 IVPRIEHYGCMVDLLSRAGFLDEAHRLIESMPMKPND-AVWGALLGGCRIHKNAELASHV 449
Query: 403 TRKI-LEMERGYGGDY-VLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
+K+ LE++ Y VL+ N+ A R+ D +R+ M E K G S V
Sbjct: 450 AQKLALELKPDQAAGYLVLLSNVYATAKRWQDVALVRQKMVEIGVRKPAGRSWV 503
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 81/332 (24%), Positives = 151/332 (45%), Gaps = 31/332 (9%)
Query: 80 LIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERN 139
L++TC T+ Q+H I GF ++ L++ Y++ G L ++ K+F+ + +
Sbjct: 24 LLQTCDTIKKLK---QIHTQIIVNGFSQKNFLLVKLLSFYITSGNLLNAHKVFERIENPS 80
Query: 140 LVTWNVMITGLVKWGE----LEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFR 195
WN MI G + +E + E N +++ +I G R E +
Sbjct: 81 TTVWNQMIRGHSQSETPHKLVELYNRMVEAEAEPNEFTYSFLIGGCARSRLLREGEQVHG 140
Query: 196 KMVACEY-TEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFD------IRVLNC 248
++VA Y T T L L AI D G ++ FD I N
Sbjct: 141 RVVANGYCTNVFVRTSLVNLYAIAGGYD----------GVRKARRVFDEIVDRNIVSWNS 190
Query: 249 LIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLK 308
L+ Y +CG + A ++F+++ +N+VSWT++I+G A G K+A+ F M++ G+K
Sbjct: 191 LLAGYVRCGDVDGARRIFDEMP--ERNVVSWTTMIAGCAQIGRCKQALHLFHEMRRAGVK 248
Query: 309 PNRVTFLSVLNACSHGGLVEEGL---NFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQ 365
++V ++ L+AC+ G ++ G ++ D+ + + LI M G +++
Sbjct: 249 LDQVALVAALSACAELGDLKLGTWIHSYIDERLHAGNQPLLVSLNNSLIHMYASCGVIDK 308
Query: 366 AEKTALGIPSEITDVVVWRTLLGACSFHGNVE 397
A K +G+ T + W +++ + G+ E
Sbjct: 309 AYKVFIGMQQRST--ISWTSMITGFAKQGHAE 338
>gi|115470597|ref|NP_001058897.1| Os07g0150000 [Oryza sativa Japonica Group]
gi|34393394|dbj|BAC82905.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113610433|dbj|BAF20811.1| Os07g0150000 [Oryza sativa Japonica Group]
Length = 592
Score = 268 bits (685), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 158/434 (36%), Positives = 240/434 (55%), Gaps = 48/434 (11%)
Query: 25 NSLLHHSQL----FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFL 80
+ LL H L NT+L + + P+ A L+++ L D+ TY L
Sbjct: 74 SRLLPHGPLDPFPLNTVLRIAAGSPRPRVALELHRRRLA-----------LPDTHTYPPL 122
Query: 81 IRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNL 140
I+ CA L G LHA +K GF + V+V +LV++Y + G + + K+FDEMP R
Sbjct: 123 IQACARLLALREGECLHAEAAKNGFVTLVFVQNSLVHLYGACGLFESAHKVFDEMPVRG- 181
Query: 141 VTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVAC 200
RN+VSW +++ + R NE L +F +M+
Sbjct: 182 ----------------------------RNLVSWNSMLNSFAANGRPNEVLTVFWEMLGV 213
Query: 201 EYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIF 260
++ P TI++VL A + G + + +H Y EK G + V N LID YAKCG +
Sbjct: 214 DFA-PDGFTIVSVLTACAEFGALALGRRVHVYVEKVGLVE-NSHVSNALIDLYAKCGSVN 271
Query: 261 SASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNA 320
A ++FE++ + R +VSWTS+I G A +G GKEA+E F M++ L P +T + VL A
Sbjct: 272 DARRIFEEMGLGR-TVVSWTSLIVGLAANGFGKEALELFSLMEREKLVPTEITMVGVLYA 330
Query: 321 CSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDV 380
CSH GLV++G +FD+M E+ + P I+H GC++D+LGRAGR+E+A + +P E +
Sbjct: 331 CSHCGLVDDGFRYFDRMKEDYGISPRIEHLGCMVDLLGRAGRVEEAYDYIITMPLE-PNA 389
Query: 381 VVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVM 440
VVWRTLLG+C+ H +E+G+ +++E++ G+ GDYVL+ N+ A VG + D LR+ M
Sbjct: 390 VVWRTLLGSCAMHKKLELGKVAWERLVELDPGHSGDYVLLSNLYAAVGMWADVHVLRKTM 449
Query: 441 DERNAFKVPGCSLV 454
+ K PG SLV
Sbjct: 450 VKDRVRKNPGHSLV 463
>gi|449441542|ref|XP_004138541.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Cucumis sativus]
Length = 652
Score = 268 bits (685), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 137/340 (40%), Positives = 211/340 (62%), Gaps = 4/340 (1%)
Query: 115 LVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSW 174
+V+ Y+ +G +K + KLFD MP R+ ++WN M+ G G++E LFEEMP RNV SW
Sbjct: 268 MVSGYIEIGDMKAARKLFDTMPYRDTMSWNTMLNGYANNGDVEACEQLFEEMPERNVFSW 327
Query: 175 TGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGE 234
G+I GY E L F++M+ P++ T++ VL A + G + + +H Y
Sbjct: 328 NGLIGGYAHNGCFFEVLRCFKRMLIDGLVVPNDATLVTVLSACARLGALDLGKWVHVYAA 387
Query: 235 KRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKE 294
GF I V N LID Y+KCG I +A ++FE S++ K+L++W S+I G A HG G +
Sbjct: 388 TIGFKG-SIYVGNALIDMYSKCGLIENAMEVFE--SMDLKDLITWNSMICGLATHGCGAD 444
Query: 295 AVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLI 354
A+ F +M+ G KP+ +TF+ VL +C+H GLVEEG ++F+ MV E + P I+HYGC++
Sbjct: 445 ALTLFHQMKINGEKPDGITFIGVLCSCTHLGLVEEGTSYFNSMVNEYSIAPQIEHYGCMV 504
Query: 355 DMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYG 414
D+ GRAG L++A + +P E D V+W LLGAC + N+++ E +K++ +E
Sbjct: 505 DLFGRAGLLDRAIEFVKRMPME-ADAVIWAALLGACRIYKNIDLAELALQKLIVLEPKNP 563
Query: 415 GDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
+YVL+ NI +GR+ D RL+ +M + + K+PGCSL+
Sbjct: 564 ANYVLLSNIYGDLGRWKDVARLKILMRDTGSKKLPGCSLI 603
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 88/360 (24%), Positives = 144/360 (40%), Gaps = 87/360 (24%)
Query: 80 LIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERN 139
L+R+C T++ L ++ A I GFQ + YV +V +V L
Sbjct: 73 LLRSCKTVA---LLQKVQAQIITHGFQYNGYVAPNVVTSWVGLK---------------- 113
Query: 140 LVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVA 199
++ AR LF+ P V W I GY E + LF KM +
Sbjct: 114 ---------------QMAHARHLFDHFPDPKVELWNAISRGYFHNAFYREVVFLFGKMKS 158
Query: 200 CEYTEPSEITILAVLPAIWQ-----NGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYA 254
+ P+ T VL + + G+ C++I G E F A LID Y+
Sbjct: 159 MD-VRPNCFTFPLVLKSCAKIGAFVEGEEIHCEVIKGGLEGNQFVA------TTLIDVYS 211
Query: 255 KCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENF--------------- 299
I SA KLF + + +N+V+WTS+ISG+ + A F
Sbjct: 212 GGRAIGSAYKLF--VGMLERNIVAWTSMISGYILCNRVALARRLFDLAPERDVVLWNIMV 269
Query: 300 -GRMQKVGLKPNR-----------VTFLSVLNACSHGGLVEEGLNFFDKMVEE-----CE 342
G ++ +K R +++ ++LN ++ G VE F++M E
Sbjct: 270 SGYIEIGDMKAARKLFDTMPYRDTMSWNTMLNGYANNGDVEACEQLFEEMPERNVFSWNG 329
Query: 343 VLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERV 402
++ H GC ++L R+ L +P++ T V T+L AC+ G +++G+ V
Sbjct: 330 LIGGYAHNGCFFEVLRCFKRM---LIDGLVVPNDATLV----TVLSACARLGALDLGKWV 382
Score = 43.5 bits (101), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 75/181 (41%), Gaps = 24/181 (13%)
Query: 266 FEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGG 325
F D VE W +I G+ + +E V FG+M+ + ++PN TF VL +C+ G
Sbjct: 125 FPDPKVEL-----WNAISRGYFHNAFYREVVFLFGKMKSMDVRPNCFTFPLVLKSCAKIG 179
Query: 326 LVEEGLNFFDKMVEECEVLPDIKH-----YGCLIDMLGRAGRLEQAEKTALGIPSEITDV 380
EG CEV+ LID+ + A K +G+ ++
Sbjct: 180 AFVEGEEI------HCEVIKGGLEGNQFVATTLIDVYSGGRAIGSAYKLFVGMLER--NI 231
Query: 381 VVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVM 440
V W +++ V + R+ L ER D VL +++G GD + R++
Sbjct: 232 VAWTSMISGYILCNRVALARRLFD--LAPER----DVVLWNIMVSGYIEIGDMKAARKLF 285
Query: 441 D 441
D
Sbjct: 286 D 286
>gi|297720883|ref|NP_001172804.1| Os02g0151000 [Oryza sativa Japonica Group]
gi|51535971|dbj|BAD38052.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|218190072|gb|EEC72499.1| hypothetical protein OsI_05871 [Oryza sativa Indica Group]
gi|255670608|dbj|BAH91533.1| Os02g0151000 [Oryza sativa Japonica Group]
Length = 922
Score = 268 bits (685), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 142/396 (35%), Positives = 228/396 (57%), Gaps = 11/396 (2%)
Query: 57 LQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALV 116
LQ+++ S + P S T F C+ + GTQ+H++ KVG Q + + AL+
Sbjct: 407 LQELH---RSGMLPSLSSLTSIFF--ACSNIVALETGTQVHSLAVKVGCQFNSFACNALI 461
Query: 117 NMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTG 176
MY ++ + ++F M +++V+WN + LV+ L+ AR+ F+ M R+ VSWT
Sbjct: 462 TMYGKCRNMEYARQVFSRMVTKDIVSWNSFLAALVQNDLLDEARNTFDNMLSRDDVSWTT 521
Query: 177 IIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKR 236
II Y +SNEA+ F+ M CE+ P+ + +L G K Q IH K
Sbjct: 522 IISAYAHAEQSNEAMGAFKTMF-CEHELPNSPILTILLGVCGSLGASKIGQQIHTVAIKL 580
Query: 237 GFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAV 296
G + ++ V N LI Y KCGC S ++F+ +E +++ +W +II+G+A HG+G+EA+
Sbjct: 581 GMDS-ELIVANALISMYFKCGCADS-RRIFD--LMEERDIFTWNTIITGYAQHGLGREAI 636
Query: 297 ENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDM 356
+ + M+ G+ PN VTF+ +LNACSH GLV+EG FF M ++ + P +HY C++D+
Sbjct: 637 KMYQHMESAGVLPNEVTFVGLLNACSHAGLVDEGWKFFKSMSQDYGLTPLPEHYACMVDL 696
Query: 357 LGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGD 416
LGR G ++ AE+ +P E D V+W LLGAC H N E+G+R K+ +E G+
Sbjct: 697 LGRTGDVQGAEQFIYDMPIE-PDTVIWSALLGACKIHKNAEIGKRAAEKLFRIEPSNAGN 755
Query: 417 YVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCS 452
YV++ NI + +G +G+ +R++M ++ K PGCS
Sbjct: 756 YVMLSNIYSSLGMWGEVAEVRKIMKQQGVIKEPGCS 791
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 87/310 (28%), Positives = 151/310 (48%), Gaps = 18/310 (5%)
Query: 73 DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLF 132
+ +T+S +I A LSH AV + +S + TAL+ G + D+ LF
Sbjct: 290 NEYTWSTMI---AALSHGGRIDAAIAVYERDPVKS-IACRTALITGLAQCGRIDDARILF 345
Query: 133 DEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALA 192
+++PE +V+WN +ITG ++ G + A+ LF++MP RN +SW G+I GY + RS EAL
Sbjct: 346 EQIPEPIVVSWNALITGYMQNGMVNEAKELFDKMPFRNTISWAGMIAGYAQNGRSEEALG 405
Query: 193 LFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDT 252
L +++ PS ++ ++ A +++ +H K G F+ N LI
Sbjct: 406 LLQELHRSGML-PSLSSLTSIFFACSNIVALETGTQVHSLAVKVG-CQFNSFACNALITM 463
Query: 253 YAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRV 312
Y KC + A ++F + K++VSW S ++ + + EA F M L + V
Sbjct: 464 YGKCRNMEYARQVFSRMVT--KDIVSWNSFLAALVQNDLLDEARNTFDNM----LSRDDV 517
Query: 313 TFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEK---- 368
++ ++++A +H E + F M E E LP+ L+ + G G + ++
Sbjct: 518 SWTTIISAYAHAEQSNEAMGAFKTMFCEHE-LPNSPILTILLGVCGSLGASKIGQQIHTV 576
Query: 369 -TALGIPSEI 377
LG+ SE+
Sbjct: 577 AIKLGMDSEL 586
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 91/360 (25%), Positives = 171/360 (47%), Gaps = 28/360 (7%)
Query: 47 PQKAFLLYKQLQQIYTHSHSP--LPPLFDSFTYSFLIRTCATL--SHPNLGTQLHAVISK 102
P++ + + + Y H+ P L+D+ + + RT A L + LG L A +
Sbjct: 61 PRRDIIAWNSMISAYCHNGMPDAARDLYDAISGGNM-RTGAILLSGYGRLGRVLEA---R 116
Query: 103 VGFQSHVYVNT----ALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEF 158
F + NT A+++ YV G + + +LFD MP R++ +WN M+TG ++
Sbjct: 117 RVFDGMLERNTVAWNAMISCYVQNGDITMARRLFDAMPSRDVSSWNSMLTGYCHSLQMVD 176
Query: 159 ARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIW 218
AR+LFE+MP RN+VSWT +I GY R+ +A +F KM E P + + L A+
Sbjct: 177 ARNLFEKMPERNLVSWTVMISGYGRIENHGKAWDIFCKMHR-EGLLPDQSNFASALSAVK 235
Query: 219 QNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIF-SASKLFEDISVERKNLV 277
G++ + + K GF D+ + +++ Y++ + +A K FE + +ER N
Sbjct: 236 GLGNLDVLESLRVLALKTGFER-DVVIGTAILNVYSRDTSVLDTAIKFFESM-IER-NEY 292
Query: 278 SWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKM 337
+W+++I+ + G A+ + R V R ++ L C G +++ F+++
Sbjct: 293 TWSTMIAALSHGGRIDAAIAVYER-DPVKSIACRTALITGLAQC---GRIDDARILFEQI 348
Query: 338 VEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVE 397
E P + + LI + G + +A++ +P + + W ++ + +G E
Sbjct: 349 PE-----PIVVSWNALITGYMQNGMVNEAKELFDKMP--FRNTISWAGMIAGYAQNGRSE 401
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 99/199 (49%), Gaps = 12/199 (6%)
Query: 122 LGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGY 181
LG + ++ ++FD MP R+++ WN MI+ G + AR L++ + N+ + ++ GY
Sbjct: 47 LGRVGEAREVFDAMPRRDIIAWNSMISAYCHNGMPDAARDLYDAISGGNMRTGAILLSGY 106
Query: 182 TRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAF 241
R+ R EA +F M+ E + + A++ QNGD+ + + R
Sbjct: 107 GRLGRVLEARRVFDGML-----ERNTVAWNAMISCYVQNGDITMARRLFDAMPSR----- 156
Query: 242 DIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGR 301
D+ N ++ Y + A LFE + +NLVSWT +ISG+ +A + F +
Sbjct: 157 DVSSWNSMLTGYCHSLQMVDARNLFEKMP--ERNLVSWTVMISGYGRIENHGKAWDIFCK 214
Query: 302 MQKVGLKPNRVTFLSVLNA 320
M + GL P++ F S L+A
Sbjct: 215 MHREGLLPDQSNFASALSA 233
>gi|296088012|emb|CBI35295.3| unnamed protein product [Vitis vinifera]
Length = 645
Score = 268 bits (685), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 167/510 (32%), Positives = 265/510 (51%), Gaps = 61/510 (11%)
Query: 1 MHILQNSQTPNNIT--TQIHSHLL--TTN---SLLHH-SQLF----NTLLHFYSLAESPQ 48
+H+L+ ++T +IH H L T+N S+LH ++L+ +L E P
Sbjct: 12 LHLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPN 71
Query: 49 KAFLLYKQLQQIYT------------HSHSPLPPLFDSFTYSFLIRTCATLSHPNLGTQL 96
+ +L+ Q+ + Y HS L + +TY F+++ C+ L G ++
Sbjct: 72 PSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEI 131
Query: 97 HAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGEL 156
H+ G +S V+V TALV+ Y G L ++ +LF M R++V WN MI G +G
Sbjct: 132 HSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLC 191
Query: 157 E--------------------------------FARSLFEEMPCRNVVSWTGIIDGYTRM 184
+ +AR +F+ M RN VSW+ +I GY
Sbjct: 192 DDAVQLIMQMQEEGICPNSSTIVGVLPTCQCLLYARKIFDVMGVRNEVSWSAMIGGYVAS 251
Query: 185 NRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIR 244
+ EAL +FR M+ +P T+L VLPA ++ HGY RGF A D
Sbjct: 252 DCMKEALDIFR-MMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGF-ATDTL 309
Query: 245 VLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQK 304
+ N LID Y+KCG I A ++F ++R ++VSW ++I G+ +HG+G EA+ F +
Sbjct: 310 ICNALIDMYSKCGKISFAREVFN--RMDRHDIVSWNAMIIGYGIHGLGMEALGLFHDLLA 367
Query: 305 VGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLE 364
+GLKP+ +TF+ +L++CSH GLV EG +FD M + ++P ++H C++D+LGRAG ++
Sbjct: 368 LGLKPDDITFICLLSSCSHSGLVMEGRLWFDAMSRDFSIVPRMEHCICMVDILGRAGLID 427
Query: 365 QAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNIL 424
+A +P E DV +W LL AC H N+E+GE V++KI + G++VL+ NI
Sbjct: 428 EAHHFIRNMPFE-PDVRIWSALLSACRIHKNIELGEEVSKKIQSLGPESTGNFVLLSNIY 486
Query: 425 AGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
+ GR+ DA +R + K+PGCS +
Sbjct: 487 SAAGRWDDAAHIRITQKDWGLKKIPGCSWI 516
>gi|356530090|ref|XP_003533617.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Glycine max]
Length = 566
Score = 268 bits (685), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 143/382 (37%), Positives = 226/382 (59%), Gaps = 5/382 (1%)
Query: 73 DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLF 132
D+ T ++ C +L + + I + + VY+ L++MY G + + +F
Sbjct: 177 DAVTMVKVVLACTSLGEWGVADAMVDYIEENNVEIDVYLGNTLIDMYGRRGLVHLARGVF 236
Query: 133 DEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALA 192
D+M RNLV+WN MI G K G L AR LF+ M R+V+SWT +I Y++ + EAL
Sbjct: 237 DQMQWRNLVSWNAMIMGYGKAGNLVAARELFDAMSQRDVISWTNMITSYSQAGQFTEALR 296
Query: 193 LFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDT 252
LF++M+ + +P EIT+ +VL A G + + H Y +K A DI V N LID
Sbjct: 297 LFKEMMESK-VKPDEITVASVLSACAHTGSLDVGEAAHDYIQKYDVKA-DIYVGNALIDM 354
Query: 253 YAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRV 312
Y KCG + A ++F+++ +K+ VSWTSIISG A++G A++ F RM + ++P+
Sbjct: 355 YCKCGVVEKALEVFKEM--RKKDSVSWTSIISGLAVNGFADSALDYFSRMLREVVQPSHG 412
Query: 313 TFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALG 372
F+ +L AC+H GLV++GL +F+ M + + P++KHYGC++D+L R+G L++A +
Sbjct: 413 AFVGILLACAHAGLVDKGLEYFESMEKVYGLKPEMKHYGCVVDLLSRSGNLQRAFEFIKE 472
Query: 373 IPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGD 432
+P DVV+WR LL A HGN+ + E T+K+LE++ G+YVL N AG R+ D
Sbjct: 473 MPV-TPDVVIWRILLSASQVHGNIPLAEIATKKLLELDPSNSGNYVLSSNTYAGSNRWED 531
Query: 433 AERLRRVMDERNAFKVPGCSLV 454
A ++R +M++ N K G S +
Sbjct: 532 AVKMRELMEKSNVQKPSGSSCI 553
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 121/434 (27%), Positives = 212/434 (48%), Gaps = 62/434 (14%)
Query: 10 PNNITTQIHSHLLTTNSLLHHSQLF-----------NTLLHFYSLAESPQKAFLLYKQLQ 58
P+ I I S+ L+ +++L LF N ++ +S+++ P +A +Y +
Sbjct: 10 PSTIYNLIKSYALSPSTILKAHNLFQQIHRPTLPFWNIMIRGWSVSDQPNEAIRMYNLMY 69
Query: 59 QIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNM 118
+ L ++ TY FL + CA + + G+ +HA + K+GF+SH+YV+ AL+NM
Sbjct: 70 R--------QGLLGNNLTYLFLFKACARVPDVSCGSTIHARVLKLGFESHLYVSNALINM 121
Query: 119 YVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNV----VSW 174
Y S G L + K+FDEMPER+LV+WN ++ G + +FE M V V+
Sbjct: 122 YGSCGHLGLAQKVFDEMPERDLVSWNSLVCGYGQCKRFREVLGVFEAMRVAGVKGDAVTM 181
Query: 175 TGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGE 234
++ T + A A+ +Y E + + I L LI YG
Sbjct: 182 VKVVLACTSLGEWGVADAM------VDYIEENNVEIDVYL----------GNTLIDMYGR 225
Query: 235 K------RG-FTAFDIRVL---NCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIIS 284
+ RG F R L N +I Y K G + +A +LF+ +S +++++SWT++I+
Sbjct: 226 RGLVHLARGVFDQMQWRNLVSWNAMIMGYGKAGNLVAARELFDAMS--QRDVISWTNMIT 283
Query: 285 GFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVL 344
++ G EA+ F M + +KP+ +T SVL+AC+H G ++ G D +++ +V
Sbjct: 284 SYSQAGQFTEALRLFKEMMESKVKPDEITVASVLSACAHTGSLDVGEAAHD-YIQKYDVK 342
Query: 345 PDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEI--TDVVVWRTLLGACSFHGNVEMG--- 399
DI LIDM + G +E+ AL + E+ D V W +++ + +G +
Sbjct: 343 ADIYVGNALIDMYCKCGVVEK----ALEVFKEMRKKDSVSWTSIISGLAVNGFADSALDY 398
Query: 400 -ERVTRKILEMERG 412
R+ R++++ G
Sbjct: 399 FSRMLREVVQPSHG 412
>gi|297739912|emb|CBI30094.3| unnamed protein product [Vitis vinifera]
Length = 614
Score = 268 bits (685), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 135/332 (40%), Positives = 210/332 (63%), Gaps = 2/332 (0%)
Query: 123 GFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYT 182
G L ++ LF+ MPER+L +WN MITGL++ G+L AR LF EMP +NV+SWT +I G
Sbjct: 232 GLLDEALDLFERMPERDLPSWNTMITGLIQNGDLRRARKLFNEMPKKNVISWTTMITGCV 291
Query: 183 RMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFD 242
+ S EAL +F +M++ +P++ T ++VL A + Q +H K +
Sbjct: 292 QEGESEEALKIFSRMLSTNGAKPNQGTFVSVLGACSNLAGLGEGQQVHQIISKTVYQDST 351
Query: 243 IRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRM 302
V++ LI+ Y+KCG + +A K+F+D +++LVSW II+ +A HG GKEA+ F M
Sbjct: 352 F-VVSALINMYSKCGELGTARKMFDDGMTSQRDLVSWNGIIAAYAHHGYGKEAINFFKEM 410
Query: 303 QKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGR 362
+K G KP+ VT++ +L+ACSH GLVEEGL +FD++V++ +L HY CL+D+ GRAGR
Sbjct: 411 RKSGFKPDDVTYVGLLSACSHAGLVEEGLKYFDELVKDRSILVREDHYACLVDLCGRAGR 470
Query: 363 LEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYN 422
L++A + ++ + VW LL C+ H NV++G++ +K+LE+E G Y+L+ N
Sbjct: 471 LKEAFGFIERLETKPS-ARVWGALLAGCNVHANVKIGKQAAKKLLEVEPENAGTYLLLSN 529
Query: 423 ILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
I A G++ +A R+R M ++ K PGCS +
Sbjct: 530 IYASTGKWREAARVRLKMKDKGLKKQPGCSWI 561
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 103/346 (29%), Positives = 166/346 (47%), Gaps = 23/346 (6%)
Query: 99 VISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEF 158
+ +V + +V TA+V Y+ + D+ KLF+EMP +N+V+WN MI G + G ++
Sbjct: 120 LFDRVDAKKNVVTWTAMVGGYIRSNKISDAEKLFNEMPNKNVVSWNTMIDGYAQNGRIDS 179
Query: 159 ARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIW 218
A LFE+MP RNVVSW ++ + R EA LF +M E I+ A++ +
Sbjct: 180 AMYLFEKMPERNVVSWNTVMSMLAQCGRIEEARRLFDRM-----PERDVISWTAMIAGLL 234
Query: 219 QNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVS 278
++ L E+ D+ N +I + G + A KLF ++ +KN++S
Sbjct: 235 D----EALDLFERMPER------DLPSWNTMITGLIQNGDLRRARKLFNEMP--KKNVIS 282
Query: 279 WTSIISGFAMHGMGKEAVENFGRMQKV-GLKPNRVTFLSVLNACSHGGLVEEGLNFFDKM 337
WT++I+G G +EA++ F RM G KPN+ TF+SVL ACS+ + EG ++
Sbjct: 283 WTTMITGCVQEGESEEALKIFSRMLSTNGAKPNQGTFVSVLGACSNLAGLGEGQQVH-QI 341
Query: 338 VEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVE 397
+ + LI+M + G L A K + D+V W ++ A + HG
Sbjct: 342 ISKTVYQDSTFVVSALINMYSKCGELGTARKMFDDGMTSQRDLVSWNGIIAAYAHHG--- 398
Query: 398 MGERVTRKILEMER-GYGGDYVLMYNILAGVGRFGDAERLRRVMDE 442
G+ EM + G+ D V +L+ G E + DE
Sbjct: 399 YGKEAINFFKEMRKSGFKPDDVTYVGLLSACSHAGLVEEGLKYFDE 444
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/308 (25%), Positives = 149/308 (48%), Gaps = 33/308 (10%)
Query: 139 NLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMV 198
N+ N MIT L K G + AR LF+EM +V++WT +I GY + EA LF ++
Sbjct: 66 NVARCNWMITNLSKDGRIMEARRLFDEMREPDVITWTTVISGYIKCGMIEEARRLFDRVD 125
Query: 199 ACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGC 258
A + + +T A++ ++ + + + + ++ N +ID YA+ G
Sbjct: 126 A----KKNVVTWTAMVGGYIRSNKISDAEKLFNEMPNKNVVSW-----NTMIDGYAQNGR 176
Query: 259 IFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNR--VTFLS 316
I SA LFE + +N+VSW +++S A G +EA F RM P R +++ +
Sbjct: 177 IDSAMYLFEKMP--ERNVVSWNTVMSMLAQCGRIEEARRLFDRM------PERDVISWTA 228
Query: 317 VLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSE 376
++ GL++E L+ F++M E D+ + +I L + G L +A K +P +
Sbjct: 229 MI-----AGLLDEALDLFERMPER-----DLPSWNTMITGLIQNGDLRRARKLFNEMPKK 278
Query: 377 ITDVVVWRTLLGACSFHGNVEMGERVTRKILEME--RGYGGDYVLMYNILAGVGRFGDAE 434
+V+ W T++ C G E ++ ++L + G +V + + + G+ +
Sbjct: 279 --NVISWTTMITGCVQEGESEEALKIFSRMLSTNGAKPNQGTFVSVLGACSNLAGLGEGQ 336
Query: 435 RLRRVMDE 442
++ +++ +
Sbjct: 337 QVHQIISK 344
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 98/240 (40%), Gaps = 60/240 (25%)
Query: 76 TYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDE- 134
T+ ++ C+ L+ G Q+H +ISK +Q +V +AL+NMY G L + K+FD+
Sbjct: 318 TFVSVLGACSNLAGLGEGQQVHQIISKTVYQDSTFVVSALINMYSKCGELGTARKMFDDG 377
Query: 135 -MPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALAL 193
+R+LV+WN GII Y EA+
Sbjct: 378 MTSQRDLVSWN-------------------------------GIIAAYAHHGYGKEAINF 406
Query: 194 FRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLN------ 247
F++M + +P ++T + +L A G V+ G FD V +
Sbjct: 407 FKEMRKSGF-KPDDVTYVGLLSACSHAGLVEE-----------GLKYFDELVKDRSILVR 454
Query: 248 -----CLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHG---MGKEAVENF 299
CL+D + G + A E + + V W ++++G +H +GK+A +
Sbjct: 455 EDHYACLVDLCGRAGRLKEAFGFIERLETKPSARV-WGALLAGCNVHANVKIGKQAAKKL 513
>gi|222622177|gb|EEE56309.1| hypothetical protein OsJ_05395 [Oryza sativa Japonica Group]
Length = 922
Score = 268 bits (685), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 142/396 (35%), Positives = 228/396 (57%), Gaps = 11/396 (2%)
Query: 57 LQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALV 116
LQ+++ S + P S T F C+ + GTQ+H++ KVG Q + + AL+
Sbjct: 407 LQELH---RSGMLPSLSSLTSIFF--ACSNIVALETGTQVHSLAVKVGCQFNSFACNALI 461
Query: 117 NMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTG 176
MY ++ + ++F M +++V+WN + LV+ L+ AR+ F+ M R+ VSWT
Sbjct: 462 TMYGKCRNMEYARQVFSRMVTKDIVSWNSFLAALVQNDLLDEARNTFDNMLSRDDVSWTT 521
Query: 177 IIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKR 236
II Y +SNEA+ F+ M CE+ P+ + +L G K Q IH K
Sbjct: 522 IISAYAHAEQSNEAMGAFKTMF-CEHELPNSPILTILLGVCGSLGASKIGQQIHTVAIKL 580
Query: 237 GFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAV 296
G + ++ V N LI Y KCGC S ++F+ +E +++ +W +II+G+A HG+G+EA+
Sbjct: 581 GMDS-ELIVANALISMYFKCGCADS-RRIFD--LMEERDIFTWNTIITGYAQHGLGREAI 636
Query: 297 ENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDM 356
+ + M+ G+ PN VTF+ +LNACSH GLV+EG FF M ++ + P +HY C++D+
Sbjct: 637 KMYQHMESAGVLPNEVTFVGLLNACSHAGLVDEGWKFFKSMSQDYGLTPLPEHYACMVDL 696
Query: 357 LGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGD 416
LGR G ++ AE+ +P E D V+W LLGAC H N E+G+R K+ +E G+
Sbjct: 697 LGRTGDVQGAEQFIYDMPIE-PDTVIWSALLGACKIHKNAEIGKRAAEKLFRIEPSNAGN 755
Query: 417 YVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCS 452
YV++ NI + +G +G+ +R++M ++ K PGCS
Sbjct: 756 YVMLSNIYSSLGMWGEVAEVRKIMKQQGVIKEPGCS 791
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 87/310 (28%), Positives = 151/310 (48%), Gaps = 18/310 (5%)
Query: 73 DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLF 132
+ +T+S +I A LSH AV + +S + TAL+ G + D+ LF
Sbjct: 290 NEYTWSTMI---AALSHGGRIDAAIAVYERDPVKS-IACRTALITGLAQCGRIDDARILF 345
Query: 133 DEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALA 192
+++PE +V+WN +ITG ++ G + A+ LF++MP RN +SW G+I GY + RS EAL
Sbjct: 346 EQIPEPIVVSWNALITGYMQNGMVNEAKELFDKMPFRNTISWAGMIAGYAQNGRSEEALG 405
Query: 193 LFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDT 252
L +++ PS ++ ++ A +++ +H K G F+ N LI
Sbjct: 406 LLQELHRSGML-PSLSSLTSIFFACSNIVALETGTQVHSLAVKVG-CQFNSFACNALITM 463
Query: 253 YAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRV 312
Y KC + A ++F + K++VSW S ++ + + EA F M L + V
Sbjct: 464 YGKCRNMEYARQVFSRMVT--KDIVSWNSFLAALVQNDLLDEARNTFDNM----LSRDDV 517
Query: 313 TFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEK---- 368
++ ++++A +H E + F M E E LP+ L+ + G G + ++
Sbjct: 518 SWTTIISAYAHAEQSNEAMGAFKTMFCEHE-LPNSPILTILLGVCGSLGASKIGQQIHTV 576
Query: 369 -TALGIPSEI 377
LG+ SE+
Sbjct: 577 AIKLGMDSEL 586
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 91/360 (25%), Positives = 171/360 (47%), Gaps = 28/360 (7%)
Query: 47 PQKAFLLYKQLQQIYTHSHSP--LPPLFDSFTYSFLIRTCATL--SHPNLGTQLHAVISK 102
P++ + + + Y H+ P L+D+ + + RT A L + LG L A +
Sbjct: 61 PRRDIIAWNSMISAYCHNGMPDAARDLYDAISGGNM-RTGAILLSGYGRLGRVLEA---R 116
Query: 103 VGFQSHVYVNT----ALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEF 158
F + NT A+++ YV G + + +LFD MP R++ +WN M+TG ++
Sbjct: 117 RVFDGMLERNTVAWNAMISCYVQNGDITMARRLFDAMPSRDVSSWNSMLTGYCHSLQMVD 176
Query: 159 ARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIW 218
AR+LFE+MP RN+VSWT +I GY R+ +A +F KM E P + + L A+
Sbjct: 177 ARNLFEKMPERNLVSWTVMISGYGRIENHGKAWDIFCKMHR-EGLLPDQSNFASALSAVK 235
Query: 219 QNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIF-SASKLFEDISVERKNLV 277
G++ + + K GF D+ + +++ Y++ + +A K FE + +ER N
Sbjct: 236 GLGNLDVLESLRVLALKTGFER-DVVIGTAILNVYSRDTSVLDTAIKFFESM-IER-NEY 292
Query: 278 SWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKM 337
+W+++I+ + G A+ + R V R ++ L C G +++ F+++
Sbjct: 293 TWSTMIAALSHGGRIDAAIAVYER-DPVKSIACRTALITGLAQC---GRIDDARILFEQI 348
Query: 338 VEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVE 397
E P + + LI + G + +A++ +P + + W ++ + +G E
Sbjct: 349 PE-----PIVVSWNALITGYMQNGMVNEAKELFDKMP--FRNTISWAGMIAGYAQNGRSE 401
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 99/199 (49%), Gaps = 12/199 (6%)
Query: 122 LGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGY 181
LG + ++ ++FD MP R+++ WN MI+ G + AR L++ + N+ + ++ GY
Sbjct: 47 LGRVGEAREVFDAMPRRDIIAWNSMISAYCHNGMPDAARDLYDAISGGNMRTGAILLSGY 106
Query: 182 TRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAF 241
R+ R EA +F M+ E + + A++ QNGD+ + + R
Sbjct: 107 GRLGRVLEARRVFDGML-----ERNTVAWNAMISCYVQNGDITMARRLFDAMPSR----- 156
Query: 242 DIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGR 301
D+ N ++ Y + A LFE + +NLVSWT +ISG+ +A + F +
Sbjct: 157 DVSSWNSMLTGYCHSLQMVDARNLFEKMP--ERNLVSWTVMISGYGRIENHGKAWDIFCK 214
Query: 302 MQKVGLKPNRVTFLSVLNA 320
M + GL P++ F S L+A
Sbjct: 215 MHREGLLPDQSNFASALSA 233
>gi|225425182|ref|XP_002264325.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13600
[Vitis vinifera]
Length = 684
Score = 268 bits (685), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 154/395 (38%), Positives = 229/395 (57%), Gaps = 13/395 (3%)
Query: 66 SPLPPLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVG-FQSHVYVNTALVNMYVSLGF 124
S L P D T + ++ CA+L G Q+HA + K F+ + + ALV+MY
Sbjct: 242 SGLEP--DEVTLASVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSK 299
Query: 125 LKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRM 184
+ ++ ++FD M RN+V+ M++G + ++ AR +F +M RNVVSW +I GYT+
Sbjct: 300 VNEARRVFDRMSIRNVVSETSMVSGYARAASVKAARFMFSKMTQRNVVSWNALIAGYTQN 359
Query: 185 NRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGF-----T 239
+ EAL LFR ++ E P+ T +L A D+ + H + K+GF
Sbjct: 360 GENEEALRLFR-LLKRESIWPTHYTFGNLLSACANLADLLLGRQAHTHVLKQGFEFQSGA 418
Query: 240 AFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENF 299
DI V N LID Y KCG I S++FE + + ++ VSW +II G+A +G G EA++ F
Sbjct: 419 ESDIFVGNSLIDMYMKCGSIEDGSRVFEKM--KERDCVSWNAIIVGYAQNGYGAEALQIF 476
Query: 300 GRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGR 359
+M G KP+ VT + VL ACSH GLVEEG ++F M EE ++P HY C++D+LGR
Sbjct: 477 RKMLVCGEKPDHVTMIGVLCACSHAGLVEEGRHYFFSM-EEHGLIPLKDHYTCMVDLLGR 535
Query: 360 AGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVL 419
AG L +A+ +P D VVW +LL AC HGN+EMG+ K+LE++ G YVL
Sbjct: 536 AGCLNEAKNLIEAMPVN-PDAVVWGSLLAACKVHGNIEMGKHAAEKLLEIDPWNSGPYVL 594
Query: 420 MYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
+ N+ A +GR+GD R+R++M ++ K PGCS +
Sbjct: 595 LSNMYAELGRWGDVVRVRKLMRQQGVTKQPGCSWI 629
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 98/314 (31%), Positives = 163/314 (51%), Gaps = 15/314 (4%)
Query: 57 LQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLGTQL-HAVISKVGFQSHVYVNTAL 115
++ +Y + SP L DS S R GT+L HA I F +++ L
Sbjct: 7 VRDLYLPNSSPFAKLLDSCLRSRSAR----------GTRLVHARILMTQFSMEIFIQNRL 56
Query: 116 VNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWT 175
+++Y L D+ KLFD MP+RN TWN +I+ L K G L+ A LF MP + SW
Sbjct: 57 IDVYGKCDCLDDARKLFDRMPQRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWN 116
Query: 176 GIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEK 235
++ G+ + +R E+L F KM ++ +E + + L A D+ +H K
Sbjct: 117 SMVSGFAQHDRFEESLEYFVKMHREDFL-LNEYSFGSALSACAGLMDLNMGTQVHALVSK 175
Query: 236 RGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEA 295
++ D+ + + LID Y+KCG + A ++F + +ER NLV+W S+I+ + +G EA
Sbjct: 176 SRYST-DVYMGSALIDMYSKCGSVACAEEVFSGM-IER-NLVTWNSLITCYEQNGPASEA 232
Query: 296 VENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLID 355
+E F RM GL+P+ VT SV++AC+ ++EGL ++V+ + D+ L+D
Sbjct: 233 LEVFVRMMDSGLEPDEVTLASVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVD 292
Query: 356 MLGRAGRLEQAEKT 369
M + ++ +A +
Sbjct: 293 MYAKCSKVNEARRV 306
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 96/407 (23%), Positives = 174/407 (42%), Gaps = 82/407 (20%)
Query: 71 LFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSK 130
L + +++ + CA L N+GTQ+HA++SK + + VY+ +AL++MY G + + +
Sbjct: 144 LLNEYSFGSALSACAGLMDLNMGTQVHALVSKSRYSTDVYMGSALIDMYSKCGSVACAEE 203
Query: 131 LFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEA 190
+F M ER N+V+W +I Y + ++EA
Sbjct: 204 VFSGMIER-------------------------------NLVTWNSLITCYEQNGPASEA 232
Query: 191 LALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLI 250
L +F +M+ EP E+T+ +V+ A +K IH K D+ + N L+
Sbjct: 233 LEVFVRMMD-SGLEPDEVTLASVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALV 291
Query: 251 DTYAKCGCIFSASKLFEDISVE-----------------------------RKNLVSWTS 281
D YAKC + A ++F+ +S+ ++N+VSW +
Sbjct: 292 DMYAKCSKVNEARRVFDRMSIRNVVSETSMVSGYARAASVKAARFMFSKMTQRNVVSWNA 351
Query: 282 IISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNAC-----------SHGGLVEEG 330
+I+G+ +G +EA+ F +++ + P TF ++L+AC +H ++++G
Sbjct: 352 LIAGYTQNGENEEALRLFRLLKRESIWPTHYTFGNLLSACANLADLLLGRQAHTHVLKQG 411
Query: 331 LNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGAC 390
F + DI LIDM + G +E + + D V W ++
Sbjct: 412 FEF------QSGAESDIFVGNSLIDMYMKCGSIEDGSRVFEKMKER--DCVSWNAIIVGY 463
Query: 391 SFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLR 437
+ +G ++ RK+L G D+V M +L G E R
Sbjct: 464 AQNGYGAEALQIFRKMLVC--GEKPDHVTMIGVLCACSHAGLVEEGR 508
>gi|255539585|ref|XP_002510857.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223549972|gb|EEF51459.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 641
Score = 268 bits (684), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 140/368 (38%), Positives = 220/368 (59%), Gaps = 5/368 (1%)
Query: 73 DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLF 132
DS T +I C+ L + + I VY+ +L++MY G + + ++F
Sbjct: 257 DSVTMVKVILACSYLCEDGVVDSMVKYIEDKHVDIDVYLGNSLIDMYGRRGLVDLARRVF 316
Query: 133 DEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALA 192
D M E+N+V+WN M+TG G+L A+ LF EMP RNV+SWT +I G + N+ ++AL
Sbjct: 317 DRMQEKNIVSWNAMLTGYATAGDLVAAKKLFNEMPIRNVISWTCMISGCAQANQCSDALK 376
Query: 193 LFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDT 252
LF++M+ +P EIT+ +VL A G + + Q +H Y + + D+ V N LID
Sbjct: 377 LFQEMMDAN-VKPDEITVSSVLSACSHLGLLDTGQTVHEYMCRHDIKS-DVYVGNALIDM 434
Query: 253 YAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRV 312
Y KCG + A ++F D+ ++K+ VSWTS+I G A++G E F +M + GL+P
Sbjct: 435 YCKCGVVDKALEVFHDM--KKKDSVSWTSMILGLAVNGFVDNVFELFSQMLRDGLQPTHG 492
Query: 313 TFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALG 372
+F+ +L AC+H GLV++GL +F+ M + P++KHYGC++D+L R+G L++A +
Sbjct: 493 SFIGILLACTHAGLVDKGLEYFESMEHVYGLRPEMKHYGCVVDLLSRSGELDRAYEFIKQ 552
Query: 373 IPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGD 432
+P + DVV+WR LL AC H N+ + E T K+LE++ G+YVL+ N AG R+ D
Sbjct: 553 MPV-VPDVVLWRILLSACKLHRNLVLAEIATSKLLELDPSNSGNYVLLSNTYAGSDRWDD 611
Query: 433 AERLRRVM 440
A R+R +M
Sbjct: 612 ASRMRDLM 619
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 100/379 (26%), Positives = 181/379 (47%), Gaps = 42/379 (11%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNL 92
+FN L+ S +E+P +A ++Y L +Y L D+ T+ +L + C+ +
Sbjct: 123 IFNYLIRGLSQSENPNEAIVMYSDL--MYNQG-----ILGDNLTFIYLFKACSRVKDVLH 175
Query: 93 GTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVK 152
G H + K+GF S++++ +L+ MY G L + K+FD+M +R+LV+WN +I G +
Sbjct: 176 GQVFHVQVLKLGFGSYLFIENSLIRMYGYFGELGYAQKVFDKMDDRDLVSWNSLICGYSQ 235
Query: 153 WGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILA 212
+ LF M NV + +++ + + ++AC Y +
Sbjct: 236 CNRFKEVLDLFNLMREANVTA---------------DSVTMVKVILACSYLCEDGVVDSM 280
Query: 213 VLPAIWQNGDVK---SCQLIHGYGEKRGFTAFDIRVL-----------NCLIDTYAKCGC 258
V ++ D+ LI YG +RG RV N ++ YA G
Sbjct: 281 VKYIEDKHVDIDVYLGNSLIDMYG-RRGLVDLARRVFDRMQEKNIVSWNAMLTGYATAGD 339
Query: 259 IFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVL 318
+ +A KLF ++ + +N++SWT +ISG A +A++ F M +KP+ +T SVL
Sbjct: 340 LVAAKKLFNEMPI--RNVISWTCMISGCAQANQCSDALKLFQEMMDANVKPDEITVSSVL 397
Query: 319 NACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEIT 378
+ACSH GL++ G + M ++ D+ LIDM + G +++A + + +
Sbjct: 398 SACSHLGLLDTGQTVHEYMCRH-DIKSDVYVGNALIDMYCKCGVVDKALEVFHDMKKK-- 454
Query: 379 DVVVWRTLLGACSFHGNVE 397
D V W +++ + +G V+
Sbjct: 455 DSVSWTSMILGLAVNGFVD 473
>gi|225440783|ref|XP_002275884.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g37570 [Vitis vinifera]
Length = 561
Score = 268 bits (684), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 162/513 (31%), Positives = 257/513 (50%), Gaps = 79/513 (15%)
Query: 4 LQNSQTPNNITTQIHSHLLTTNSLLHHSQLFNTLLHFYSLAESPQKAFLLYKQLQQIYTH 63
L NS + + TT + + + + +++L +NT + YS S L+ ++++
Sbjct: 66 LCNSLSNFSYTTSVFNGVSSPSTVL-----WNTYIKGYSENYSVSLTVSLFIRMKR---- 116
Query: 64 SHSPLPPLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMY---- 119
+P D FTY LI+ C+ + G H + G V+V T+L+++Y
Sbjct: 117 -SDAVP---DKFTYPSLIKACSKVCGVKEGVAFHGSAVRCGVGGDVFVMTSLIDLYGKCG 172
Query: 120 ---------------------------VSLGFLKDSSKLFDEMPERNLVTWNVMITGLVK 152
S L ++ KLFDEMPE+N V+WN +I+G VK
Sbjct: 173 EILCARKVFDEMGERNVVSWTAMIAGYASFSDLVEARKLFDEMPEKNAVSWNAIISGYVK 232
Query: 153 WGELEFARSLFEEMPCRNVVS-------------------------------WTGIIDGY 181
G+L AR +F+EMP RNVVS W+ +I GY
Sbjct: 233 CGDLRSARKMFDEMPHRNVVSFTTMIDGYAKSGDMASARFVFEEAPERDVVAWSALISGY 292
Query: 182 TRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAF 241
+ + NEA+ +F +M + +P E +++++ A Q G ++ + + Y K
Sbjct: 293 VQNGQPNEAVKIFLEMCS-RNVKPDEFIMVSLMSACSQMGSLELAKWVDDYVRKSSIDVH 351
Query: 242 DIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGR 301
V+ LID AKCG + A+KLFE++ +++L+S+ S++ G ++HG G +AV F R
Sbjct: 352 RAHVIAALIDMNAKCGSMDRATKLFEEM--PKRDLISYCSMMQGLSIHGCGPQAVSLFSR 409
Query: 302 MQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAG 361
M GL P+ V F +L ACS GLV+EG +F+ M + ++P HY C++D+LGRAG
Sbjct: 410 MLNEGLTPDDVAFTVILTACSRAGLVDEGCYYFESMKTDYSIVPSPDHYACMVDLLGRAG 469
Query: 362 RLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMY 421
RL++A + +P E W LLGAC H ++E+GE V ++ E+E G+YVL+
Sbjct: 470 RLKEAYELLKSMPVE-PHAGAWGALLGACKLHCDIELGEVVADQLFELEPQNAGNYVLLS 528
Query: 422 NILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
NI A ++ D LR M ER K+PGCS +
Sbjct: 529 NIYAAAEQWLDVSLLRNKMRERGIRKIPGCSWI 561
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 92/380 (24%), Positives = 158/380 (41%), Gaps = 60/380 (15%)
Query: 68 LPPL--FDSFT-YSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGF 124
LP L FD+ + S L++ C T S Q+HA I + G ++ + + + SL
Sbjct: 16 LPTLRSFDTTSSISTLLKACTTTSTLE---QVHARIIRKGLHQDHFIISQFLTLCNSLSN 72
Query: 125 LKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRM 184
++ +F+ + + V WN I G + + SLF RM
Sbjct: 73 FSYTTSVFNGVSSPSTVLWNTYIKGYSENYSVSLTVSLF------------------IRM 114
Query: 185 NRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIR 244
RS+ P + T +++ A + VK HG + G D+
Sbjct: 115 KRSDAV--------------PDKFTYPSLIKACSKVCGVKEGVAFHGSAVRCGVGG-DVF 159
Query: 245 VLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQK 304
V+ LID Y KCG I A K+F+++ +N+VSWT++I+G+A EA + F M
Sbjct: 160 VMTSLIDLYGKCGEILCARKVFDEMG--ERNVVSWTAMIAGYASFSDLVEARKLFDEMP- 216
Query: 305 VGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLE 364
+ N V++ ++++ G + FD+M ++ + +ID ++G +
Sbjct: 217 ---EKNAVSWNAIISGYVKCGDLRSARKMFDEMPHR-----NVVSFTTMIDGYAKSGDMA 268
Query: 365 QAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGE--RVTRKILEM-ERGYGGDYVLMY 421
A P DVV W L+ G V+ G+ + LEM R D +M
Sbjct: 269 SARFVFEEAPER--DVVAWSALIS-----GYVQNGQPNEAVKIFLEMCSRNVKPDEFIMV 321
Query: 422 NILAGVGRFGDAERLRRVMD 441
++++ + G E + V D
Sbjct: 322 SLMSACSQMGSLELAKWVDD 341
>gi|449445234|ref|XP_004140378.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08305-like [Cucumis sativus]
Length = 542
Score = 268 bits (684), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 143/421 (33%), Positives = 244/421 (57%), Gaps = 12/421 (2%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+NTL+ +S ++P + ++ ++ Q + SP D TY FL++ + L + LG
Sbjct: 81 WNTLIRAFSNTKNPNPSITVFIKMLQ---NGVSP-----DYLTYPFLVKATSKLLNQELG 132
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
+H I K G + ++ +L++MY S + + K+FDEMP +NLVTWN M+ G K
Sbjct: 133 MAVHVHIVKSGHEIDKFIQNSLIHMYASCRDIASARKVFDEMPRKNLVTWNAMLDGYAKC 192
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
G+L AR +F MP ++VVSW+ +IDGY + EA+ALF +M + + +E+T+++
Sbjct: 193 GDLNMAREVFNLMPEKDVVSWSSLIDGYVKGRVYGEAMALFERM-SFDGPMANEVTLVSA 251
Query: 214 LPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVER 273
L A G ++ +++H Y + I + L+D YAKCG I A +F S++
Sbjct: 252 LCACAHLGALEHGRMMHRYIVENEL-PLTIVLQTSLVDMYAKCGAIHEALTVFRACSLQE 310
Query: 274 KNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNF 333
+++ W +II G A HG+ KEA+ F M+ VG+ P+ +T+L +L+ C+HGGLVEE F
Sbjct: 311 ADVLIWNAIIGGLATHGLIKEAMNLFCEMKMVGIVPDEITYLCLLSCCAHGGLVEEAWYF 370
Query: 334 FDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFH 393
FD + + ++P ++HY C++D L RAG++ +A + +P + T ++ LL C H
Sbjct: 371 FDCLRKH-GMIPKVEHYACMVDALSRAGQVSEAYQFLCQMPVQPTSSML-GALLSGCMKH 428
Query: 394 GNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSL 453
G +++ + V R+++E++ + G YV + NI A R+ DA+ +R M+ + K PG S
Sbjct: 429 GKLDIAKVVGRRLVELDPNHDGRYVGLSNIYAADKRWDDAKNIREAMERKGVKKSPGFSF 488
Query: 454 V 454
+
Sbjct: 489 I 489
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 126/282 (44%), Gaps = 32/282 (11%)
Query: 145 VMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKM----VAC 200
++ + L +L+++ L +P +W +I ++ N ++ +F KM V+
Sbjct: 52 LLFSALSPARDLDYSYKLILNVPNPTTFNWNTLIRAFSNTKNPNPSITVFIKMLQNGVSP 111
Query: 201 EY-TEPSEITI----------LAVLPAIWQNG----DVKSCQLIHGYGEKRGFTA----F 241
+Y T P + +AV I ++G LIH Y R + F
Sbjct: 112 DYLTYPFLVKATSKLLNQELGMAVHVHIVKSGHEIDKFIQNSLIHMYASCRDIASARKVF 171
Query: 242 D------IRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEA 295
D + N ++D YAKCG + A ++F + K++VSW+S+I G+ + EA
Sbjct: 172 DEMPRKNLVTWNAMLDGYAKCGDLNMAREVFN--LMPEKDVVSWSSLIDGYVKGRVYGEA 229
Query: 296 VENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLID 355
+ F RM G N VT +S L AC+H G +E G + + E E+ I L+D
Sbjct: 230 MALFERMSFDGPMANEVTLVSALCACAHLGALEHG-RMMHRYIVENELPLTIVLQTSLVD 288
Query: 356 MLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVE 397
M + G + +A + DV++W ++G + HG ++
Sbjct: 289 MYAKCGAIHEALTVFRACSLQEADVLIWNAIIGGLATHGLIK 330
>gi|224120376|ref|XP_002318314.1| predicted protein [Populus trichocarpa]
gi|222858987|gb|EEE96534.1| predicted protein [Populus trichocarpa]
Length = 539
Score = 268 bits (684), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 146/395 (36%), Positives = 224/395 (56%), Gaps = 23/395 (5%)
Query: 80 LIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERN 139
++ CA++ G +H + + G ++V ALV+MY G + ++SK+FD + E++
Sbjct: 19 VLPACASMGAWLHGKAVHGIAVRSGSFEDLFVGNALVDMYAKCGMVDEASKVFDRIKEKD 78
Query: 140 LVTWNVMITGLVKWGELEFARSLFEEMPCRN----VVSWTGIIDGYTRMNRSNEALALFR 195
+V+WN M+ G + G E A LFE+M N VVSW+ +I + + E L +FR
Sbjct: 79 VVSWNAMVNGYSQIGRFEDALGLFEKMREENIELNVVSWSAVIAAFAQRGLGCETLDVFR 138
Query: 196 KMVACEYTE----------------PSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFT 239
+M E + P+ TI L A + ++ + IH Y + F
Sbjct: 139 EMQHGEANDALELFSWMFKQDGLVKPNCFTISCALIACARLAALRLGRQIHAYILRNHFD 198
Query: 240 AFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENF 299
+ + V NCLID YAK G I A +F+++ ++KN VSWTS+++G+ MHG GKEA+E F
Sbjct: 199 SAFLYVANCLIDMYAKSGDIDVARFVFDNL--KQKNFVSWTSLMTGYGMHGRGKEALEVF 256
Query: 300 GRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGR 359
M++VGL+P+ VT L VL ACSH G++++G+ FF+ M +E V+P +HY C++D+LGR
Sbjct: 257 DEMRRVGLQPDGVTLLVVLYACSHSGMIDQGIEFFNSMSKEFGVIPGQEHYACMVDLLGR 316
Query: 360 AGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVL 419
AGRL +A + G+ E + +VW LL C H NVE+GE +++LE+ G Y L
Sbjct: 317 AGRLNEAMELIEGMQMEPSS-IVWVALLSGCRIHANVELGEHAAKQLLELNSENDGSYTL 375
Query: 420 MYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
+ NI A R+ D R+R +M K PGCS V
Sbjct: 376 LSNIYANARRWKDVARVRSLMKNSGIRKRPGCSWV 410
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 96/220 (43%), Gaps = 36/220 (16%)
Query: 73 DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQS-HVYVNTALVNMYVSLGFLKDSSKL 131
+ FT S + CA L+ LG Q+HA I + F S +YV L++MY G + + +
Sbjct: 165 NCFTISCALIACARLAALRLGRQIHAYILRNHFDSAFLYVANCLIDMYAKSGDIDVARFV 224
Query: 132 FDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEAL 191
FD + ++N V+W ++T GY R EAL
Sbjct: 225 FDNLKQKNFVSWTSLMT-------------------------------GYGMHGRGKEAL 253
Query: 192 ALFRKMVACEYTEPSEITILAVLPAIWQNGDV-KSCQLIHGYGEKRGFTAFDIRVLNCLI 250
+F +M +P +T+L VL A +G + + + + ++ G C++
Sbjct: 254 EVFDEMRRVGL-QPDGVTLLVVLYACSHSGMIDQGIEFFNSMSKEFGVIPGQ-EHYACMV 311
Query: 251 DTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHG 290
D + G + A +L E + +E ++V W +++SG +H
Sbjct: 312 DLLGRAGRLNEAMELIEGMQMEPSSIV-WVALLSGCRIHA 350
>gi|359495784|ref|XP_003635090.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 616
Score = 267 bits (683), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 158/427 (37%), Positives = 249/427 (58%), Gaps = 23/427 (5%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+N+++ Y+ + ++AFLL++++++ + P D FT+ L+ C+ +LG
Sbjct: 157 WNSMIGGYAHMGNWKEAFLLFRKMRE------WGMEP--DGFTFVNLLSVCSQSRDLDLG 208
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
+H I G + + V ALV+MY G L + +FD E+N+V+W MI+ +
Sbjct: 209 RYVHFCIEITGVKIDIIVRNALVDMYAKCGNLHSAQAIFDRTQEKNVVSWTSMISAYAQH 268
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
G +E AR +F++MP +NVVSW +I Y R + EAL LF KM P E T++++
Sbjct: 269 GSIEVARQIFDQMPGKNVVSWNSMISCYLREGQYREALDLFNKMRNSRVV-PDEATLVSI 327
Query: 214 LPAIWQNGDVKSCQLIHGYG-EKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVE 272
L A Q GD+ + IH Y +G A+ + + N LID YAKCG + +A +F + +
Sbjct: 328 LAACSQLGDLVMGKKIHNYILSNKG--AYGVTLYNSLIDMYAKCGPVVTALDIF--LEMP 383
Query: 273 RKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLN 332
KNLVSW II A+HG G EA++ F MQ G P+ +T +L+ACSH GLV+ GL
Sbjct: 384 GKNLVSWNVIIGALALHGCGLEAIKLFEEMQADGTLPDEITLTGLLSACSHSGLVDMGLY 443
Query: 333 FFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSF 392
+FD+M V +I+HY C++D+LGR G L +A + +P + DVVVW LLGAC
Sbjct: 444 YFDRMGVIYRVPREIEHYACMVDLLGRGGLLGEAIELIGRMPMK-PDVVVWGALLGACRI 502
Query: 393 HGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDER--------N 444
HGNVE+G+++ +++LE+E GG YVL+ NI R+ D +++R++M +R +
Sbjct: 503 HGNVEIGKQILKQLLELEPHSGGLYVLISNIYWEAQRWEDVKKIRKLMIDRGIKKGRAIS 562
Query: 445 AFKVPGC 451
+ ++ GC
Sbjct: 563 SIEIDGC 569
Score = 140 bits (354), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 111/394 (28%), Positives = 177/394 (44%), Gaps = 79/394 (20%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNL 92
++N+L+ YS ++ P A LL++++ S L P + FT F+++ C S
Sbjct: 55 MYNSLIRGYSNSDDPIDAVLLFRRM------ICSGLSP--NEFTLPFVLKACGCKSAYWE 106
Query: 93 GTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVK 152
+H + K+G S V+V AL+ +YV G + + KLFD++ ++ LV+WN MI
Sbjct: 107 AVLVHGLAIKLGIGSLVFVQNALIAVYVVCGLIHCARKLFDDITDKTLVSWNSMIG---- 162
Query: 153 WGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEY-TEPSEITIL 211
GY M EA LFRKM E+ EP T +
Sbjct: 163 ---------------------------GYAHMGNWKEAFLLFRKMR--EWGMEPDGFTFV 193
Query: 212 AVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISV 271
+L Q+ D+ + +H E G DI V N L+D YAKCG + SA +F+
Sbjct: 194 NLLSVCSQSRDLDLGRYVHFCIEITG-VKIDIIVRNALVDMYAKCGNLHSAQAIFD--RT 250
Query: 272 ERKNLVSWTSIISGFAMH-------------------------------GMGKEAVENFG 300
+ KN+VSWTS+IS +A H G +EA++ F
Sbjct: 251 QEKNVVSWTSMISAYAQHGSIEVARQIFDQMPGKNVVSWNSMISCYLREGQYREALDLFN 310
Query: 301 RMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRA 360
+M+ + P+ T +S+L ACS G + G + ++ + + Y LIDM +
Sbjct: 311 KMRNSRVVPDEATLVSILAACSQLGDLVMGKKIHNYILSN-KGAYGVTLYNSLIDMYAKC 369
Query: 361 GRLEQAEKTALGIPSEITDVVVWRTLLGACSFHG 394
G + A L +P + ++V W ++GA + HG
Sbjct: 370 GPVVTALDIFLEMPGK--NLVSWNVIIGALALHG 401
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/249 (32%), Positives = 136/249 (54%), Gaps = 7/249 (2%)
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
G+L++A+ +F+++P N + +I GY+ + +A+ LFR+M+ C P+E T+ V
Sbjct: 36 GDLQYAQRMFDQIPQPNKFMYNSLIRGYSNSDDPIDAVLLFRRMI-CSGLSPNEFTLPFV 94
Query: 214 LPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVER 273
L A L+HG K G + + V N LI Y CG I A KLF+DI+
Sbjct: 95 LKACGCKSAYWEAVLVHGLAIKLGIGSL-VFVQNALIAVYVVCGLIHCARKLFDDIT--D 151
Query: 274 KNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNF 333
K LVSW S+I G+A G KEA F +M++ G++P+ TF+++L+ CS ++ G +
Sbjct: 152 KTLVSWNSMIGGYAHMGNWKEAFLLFRKMREWGMEPDGFTFVNLLSVCSQSRDLDLG-RY 210
Query: 334 FDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFH 393
+E V DI L+DM + G L A+ A+ ++ +VV W +++ A + H
Sbjct: 211 VHFCIEITGVKIDIIVRNALVDMYAKCGNLHSAQ--AIFDRTQEKNVVSWTSMISAYAQH 268
Query: 394 GNVEMGERV 402
G++E+ ++
Sbjct: 269 GSIEVARQI 277
>gi|242051881|ref|XP_002455086.1| hypothetical protein SORBIDRAFT_03g004125 [Sorghum bicolor]
gi|241927061|gb|EES00206.1| hypothetical protein SORBIDRAFT_03g004125 [Sorghum bicolor]
Length = 627
Score = 267 bits (683), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 149/392 (38%), Positives = 228/392 (58%), Gaps = 15/392 (3%)
Query: 66 SPLPPLFDSFTYSFLIRTCATLSHPNL-GTQLHAVISKVGFQSHVYVNTALVNMYVSLGF 124
+P P TY ++ C + L G Q+H + G + V ALV+MY
Sbjct: 119 APTP-----VTYVSVLSACGKGTRDVLLGMQVHGRVVGSGVLPDLRVENALVDMYAECAD 173
Query: 125 LKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRM 184
+ + K+FD M R++V+W +++GL + G+++ AR LF+ MP R+ VSWT +IDGY
Sbjct: 174 MGSAWKVFDGMQVRSVVSWTSLLSGLARLGQVDEARDLFDRMPERDTVSWTAMIDGYVWA 233
Query: 185 NRSNEALALFRKMVACEYTEPS--EITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFD 242
R EAL +FR+M +Y+ S E T+++V+ A Q G ++ + + Y ++G D
Sbjct: 234 ARFREALEMFREM---QYSNVSADEFTMVSVITACAQLGALEMGEWVRVYMSRQGIK-MD 289
Query: 243 IRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRM 302
V N LID Y+KCG I A +F+ + ++ +WT+II G A++G +EA+E F RM
Sbjct: 290 AFVGNALIDMYSKCGSIERALDVFK--GMHHRDKFTWTAIILGLAVNGYEEEAIEMFHRM 347
Query: 303 QKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGR 362
+V P+ VTF+ VL AC+H GLV++G FF M+E + P++ HYGC+ID+LGRAG+
Sbjct: 348 IRVSETPDEVTFIGVLTACTHAGLVDKGREFFLSMIEAYNIAPNVVHYGCIIDLLGRAGK 407
Query: 363 LEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYN 422
+ +A T +P + +W TLL AC HGN E+GE V ++LE++ Y+L+ N
Sbjct: 408 ITEALDTIDQMPM-TPNSTIWGTLLAACRVHGNSEIGELVAERLLELDPENSMVYILLSN 466
Query: 423 ILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
I A R+ D RLR + E+ K PGCSL+
Sbjct: 467 IYAKCNRWEDVRRLRHAIMEKGIKKEPGCSLI 498
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 68/146 (46%), Gaps = 12/146 (8%)
Query: 277 VSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGL-VEEGLNFFD 335
V+W ++ISG G E+ +F M + G P VT++SVL+AC G V G+
Sbjct: 88 VAWNALISGHNRGGRFGESCGSFVDMARAGAAPTPVTYVSVLSACGKGTRDVLLGMQVHG 147
Query: 336 KMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGN 395
++V VLPD++ L+DM + A K G+ ++ VV W +LL + G
Sbjct: 148 RVVGS-GVLPDLRVENALVDMYAECADMGSAWKVFDGM--QVRSVVSWTSLLSGLARLGQ 204
Query: 396 VE--------MGERVTRKILEMERGY 413
V+ M ER T M GY
Sbjct: 205 VDEARDLFDRMPERDTVSWTAMIDGY 230
>gi|255551485|ref|XP_002516788.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223543876|gb|EEF45402.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 710
Score = 267 bits (683), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 142/375 (37%), Positives = 218/375 (58%), Gaps = 3/375 (0%)
Query: 80 LIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERN 139
LI C G QL + + K+GF + ++ + ++++Y + G + ++ F + N
Sbjct: 336 LISGCGRTMAMTEGQQLLSAVVKMGFDCYDFIQSTIIHLYAACGRINEACLQFRIGSKEN 395
Query: 140 LVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVA 199
+ +WN +I G V+ ++ A LF EMP R+V SW+ +I GYT+ + N AL LF KMVA
Sbjct: 396 VASWNALIAGYVRNRMIDRAMELFNEMPERDVFSWSTMISGYTQNEQPNLALELFHKMVA 455
Query: 200 CEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCI 259
+P+E+T+++VL AI +G +K + H Y T D + +ID YAKCG I
Sbjct: 456 -SGIKPNEVTMVSVLSAIATSGTLKEGRWAHEYVHNNSITVSD-NLSAAIIDMYAKCGSI 513
Query: 260 FSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLN 319
+A ++F +I + + W +II G A+HG +++ F +++ +K N +TF+ VL
Sbjct: 514 NNALEVFYEIREKASTVSPWNAIICGLAVHGHANLSLKIFSDLERRHIKLNAITFIGVLT 573
Query: 320 ACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITD 379
AC H GLVE G F M E + PDIKHYGC++D+LGRAGRLE+AE+ +P + D
Sbjct: 574 ACCHVGLVESGKRHFMSMKSEHSIDPDIKHYGCMVDLLGRAGRLEEAEEMIRSMPMK-AD 632
Query: 380 VVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRV 439
VV+W TLL AC HGNV++GER + +E +G VL+ N+ A G++ DA +RR
Sbjct: 633 VVIWGTLLAACRTHGNVDVGERAAENLARLEPSHGASRVLLSNMYADAGKWEDAFLVRRA 692
Query: 440 MDERNAFKVPGCSLV 454
M ++PG S V
Sbjct: 693 MQSHRMQRLPGYSGV 707
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 107/399 (26%), Positives = 194/399 (48%), Gaps = 42/399 (10%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQI-YTHSHSPLPPLFDSFTYSFLIRTCATLSHPNL 92
+ T++ +S E +A L+KQ++ + + + L ++++ I C
Sbjct: 166 YTTMIMGFSQNECWNQAVELFKQMRNVGVVPNEVTIATLVSAYSHFGGIWAC-------- 217
Query: 93 GTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVK 152
LH ++ K+ F+ V V+T L+ MY L ++ LFDEMPE+N+V+WNVM+ G K
Sbjct: 218 -RMLHGLVIKMLFEEFVLVSTNLLRMYCVCSSLVEARALFDEMPEKNIVSWNVMLNGYSK 276
Query: 153 WGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILA 212
G ++ AR +FE +P +++V+W IIDGY R+ R NEAL ++R M++ + EP+++ ++
Sbjct: 277 AGFVDSARVVFERIPNKDLVTWGTIIDGYVRVERINEALMMYRSMISAGW-EPNDVMMVD 335
Query: 213 VLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVE 272
++ + + Q + K GF +D + + +I YA CG I A F S E
Sbjct: 336 LISGCGRTMAMTEGQQLLSAVVKMGFDCYDF-IQSTIIHLYAACGRINEACLQFRIGSKE 394
Query: 273 -----------------------------RKNLVSWTSIISGFAMHGMGKEAVENFGRMQ 303
+++ SW+++ISG+ + A+E F +M
Sbjct: 395 NVASWNALIAGYVRNRMIDRAMELFNEMPERDVFSWSTMISGYTQNEQPNLALELFHKMV 454
Query: 304 KVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRL 363
G+KPN VT +SVL+A + G ++EG + + V + +IDM + G +
Sbjct: 455 ASGIKPNEVTMVSVLSAIATSGTLKEG-RWAHEYVHNNSITVSDNLSAAIIDMYAKCGSI 513
Query: 364 EQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERV 402
A + I + + V W ++ + HG+ + ++
Sbjct: 514 NNALEVFYEIREKASTVSPWNAIICGLAVHGHANLSLKI 552
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 91/323 (28%), Positives = 159/323 (49%), Gaps = 39/323 (12%)
Query: 53 LYKQLQQIYTHSHSPLPPLFDS--FTYSFLIRTCATLSHPNL----GTQLHAVISKVGFQ 106
+++Q + + H +S L P F Y ++ + +L G Q+H ++SK G
Sbjct: 39 IFQQQENPFLHLNSLLNPKTGQRHFNYELVLVSALKFCSDHLFLSQGKQIHCLVSKSGLG 98
Query: 107 SHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEM 166
S+ ++ +L+NMY G L D+ +FD P + V++NVMI+G VK G+L++A LF+EM
Sbjct: 99 SNNFIQNSLINMYGKCGLLVDAKSIFDVCPRSDPVSYNVMISGYVKSGQLDYACELFDEM 158
Query: 167 PCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSC 226
P + VS+T +I G+++ N+A+ LF++M P+E+TI ++ A G + +C
Sbjct: 159 PVKGCVSYTTMIMGFSQNECWNQAVELFKQMRNVGVV-PNEVTIATLVSAYSHFGGIWAC 217
Query: 227 QLIHGYGEKRGFTAF------------------------------DIRVLNCLIDTYAKC 256
+++HG K F F +I N +++ Y+K
Sbjct: 218 RMLHGLVIKMLFEEFVLVSTNLLRMYCVCSSLVEARALFDEMPEKNIVSWNVMLNGYSKA 277
Query: 257 GCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLS 316
G + SA +FE I K+LV+W +II G+ EA+ + M G +PN V +
Sbjct: 278 GFVDSARVVFERIP--NKDLVTWGTIIDGYVRVERINEALMMYRSMISAGWEPNDVMMVD 335
Query: 317 VLNACSHGGLVEEGLNFFDKMVE 339
+++ C + EG +V+
Sbjct: 336 LISGCGRTMAMTEGQQLLSAVVK 358
>gi|147767785|emb|CAN66974.1| hypothetical protein VITISV_022076 [Vitis vinifera]
Length = 967
Score = 267 bits (683), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 160/450 (35%), Positives = 234/450 (52%), Gaps = 43/450 (9%)
Query: 5 QNSQTPNNITTQIHSHLLTTNSLLHHSQLFNTLLHFYSLAESPQKAFLLYKQLQQIYTHS 64
+ S + ++ +I +HL L H + ++ F S ++P + L KQ + +
Sbjct: 508 RGSSSTKSLAARILAHLNVXQDL--HGKKWS----FTSAKQNPTSSSLRCKQAHSDFGNG 561
Query: 65 HSPLPPLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGF 124
F + ++ LI CA+LS G LH K GF V+ TALV+MY LG
Sbjct: 562 SC----FFTACSWKALISACASLSSHQQGRMLHTHFVKSGFGCDVFALTALVDMYAKLGL 617
Query: 125 LKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRM 184
L + K FDEM R++ TWN MI G + G+LE A LF MP RNV SWT +I GY +
Sbjct: 618 LSLARKQFDEMTVRDVPTWNSMIAGYARCGDLEGALELFRLMPARNVTSWTAMISGYAQN 677
Query: 185 NRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIR 244
+ +AL++F M P+E+T+ +VLPA G ++ + I Y G+ ++
Sbjct: 678 GQYAKALSMFLMMEEETEMRPNEVTLASVLPACANLGALEVGERIEVYARGNGYFK-NLY 736
Query: 245 VLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQK 304
V N L++ YA+CG I A +FE+I R+
Sbjct: 737 VSNALLEMYARCGRIDKAWGVFEEIDGRRE------------------------------ 766
Query: 305 VGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLE 364
G P+ VTF+ VL AC+HGG+V EG +FF+ M + + P ++HYGC++D+LGRAG L
Sbjct: 767 -GAAPDDVTFVGVLLACTHGGMVVEGQHFFESMERDFSIAPKLEHYGCMVDLLGRAGELR 825
Query: 365 QAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNIL 424
+A L +P E D VVW TLLGACSFHG+VE+ E+ + E+E G+YV++ NI
Sbjct: 826 EAHDLILRMPME-PDSVVWGTLLGACSFHGHVELAEKAAGALFELEPSNPGNYVILSNIY 884
Query: 425 AGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
A GR+ RLR++M K G S +
Sbjct: 885 ATAGRWDGVARLRKLMKGGKITKAAGYSFI 914
>gi|224117814|ref|XP_002331638.1| predicted protein [Populus trichocarpa]
gi|222874034|gb|EEF11165.1| predicted protein [Populus trichocarpa]
Length = 480
Score = 267 bits (683), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 144/360 (40%), Positives = 219/360 (60%), Gaps = 11/360 (3%)
Query: 97 HAVISKVGFQSHVYVNTALVNMYVS--LGFLKDSSKLFDEMPERNLVTWNVMITGLVKWG 154
H K G SH YV +++ Y +G L + KLFDEMP ++ VT + MIT
Sbjct: 1 HCQAVKPGIFSHGYVANNILSRYSKCVVGDLNLACKLFDEMPHKDTVTLDTMITAY---- 56
Query: 155 ELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVL 214
E A +FE MP +++V+W +I+G+ + NEAL L+++M E EP T++++L
Sbjct: 57 -FESAYKVFELMPEKDIVAWNSVINGFALNGKPNEALTLYKRM-GSEGVEPDGFTMVSLL 114
Query: 215 PAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERK 274
A + + + H Y K G ++ N L+D YAKCG I A K+F+++ +ER
Sbjct: 115 SACAELATLVLGRRAHVYMVKVGLNK-NLHANNALLDLYAKCGTISEARKIFDEMGIER- 172
Query: 275 NLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFF 334
N+VSWTS+I G A++G GKEA+E+F M++ GL P+ +TF+ VL ACSH G+V EG +F
Sbjct: 173 NVVSWTSLIVGLAVNGFGKEALEHFKDMEREGLVPSEITFVGVLYACSHCGIVNEGFEYF 232
Query: 335 DKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHG 394
+M E+ +++P I+HYGC++D+LGRAG L++A +P + + V+WRTLLGAC+ HG
Sbjct: 233 KRMKEQYDIVPRIEHYGCMVDLLGRAGLLKEAYDYIQDMPLQ-PNAVIWRTLLGACTIHG 291
Query: 395 NVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
++ +G ++L++E GDYVL+ N+ A R+ D +RR M K PG SLV
Sbjct: 292 HLGLGAFARARLLQLEPKDSGDYVLLSNLYASEQRWSDVHEVRRTMLSEGVRKTPGYSLV 351
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 131/284 (46%), Gaps = 56/284 (19%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+N++++ ++L P +A LYK++ S P D FT L+ CA L+ LG
Sbjct: 75 WNSVINGFALNGKPNEALTLYKRMG-----SEGVEP---DGFTMVSLLSACAELATLVLG 126
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMP-ERNLVTWNVMITGLVK 152
+ H + KVG +++ N AL+++Y G + ++ K+FDEM ERN+V+W +I GL
Sbjct: 127 RRAHVYMVKVGLNKNLHANNALLDLYAKCGTISEARKIFDEMGIERNVVSWTSLIVGLA- 185
Query: 153 WGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILA 212
++G+ + EAL F+ M E PSEIT +
Sbjct: 186 -------------------------VNGFGK-----EALEHFKDMER-EGLVPSEITFVG 214
Query: 213 VLPAIWQNGDVKSCQLIHGYGE-KRGFTAFDI--RV--LNCLIDTYAKCGCIFSASKLFE 267
VL A G V G+ KR +DI R+ C++D + G + A +
Sbjct: 215 VLYACSHCGIVNE-----GFEYFKRMKEQYDIVPRIEHYGCMVDLLGRAGLLKEAYDYIQ 269
Query: 268 DISVERKNLVSWTSIISGFAMHG-MGKEAVENFGRMQKVGLKPN 310
D+ ++ N V W +++ +HG +G A F R + + L+P
Sbjct: 270 DMPLQ-PNAVIWRTLLGACTIHGHLGLGA---FARARLLQLEPK 309
>gi|224133278|ref|XP_002321528.1| predicted protein [Populus trichocarpa]
gi|222868524|gb|EEF05655.1| predicted protein [Populus trichocarpa]
Length = 450
Score = 267 bits (682), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 160/424 (37%), Positives = 234/424 (55%), Gaps = 46/424 (10%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNL 92
+FNT++ + A P+KAF YK++Q+ S DSFT+SFL++ C L L
Sbjct: 55 IFNTMIRGFGKANDPRKAFDYYKRMQERGLVS--------DSFTFSFLLKVCGQLGLVLL 106
Query: 93 GTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVK 152
G +H K G SHV+V LV+MY G KD
Sbjct: 107 GRLMHCSTLKRGLNSHVFVRNTLVHMY---GTFKD------------------------- 138
Query: 153 WGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILA 212
+E +R LFEE+P +V+W IID + + NEAL +F +M+ EP E T +
Sbjct: 139 ---IEASRQLFEEIPNPELVAWNIIIDCHVSCGKFNEALEMFSRMLKFG-IEPDEATFVV 194
Query: 213 VLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVE 272
+L A G + + +H G V N L+D YAKCG + A ++F ++
Sbjct: 195 ILSACSALGALDFGRWVHSCISNIGHGCI-TEVNNSLLDMYAKCGALQEAFEIFNGMN-- 251
Query: 273 RKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGL-KPNRVTFLSVLNACSHGGLVEEGL 331
+KN V+W ++I G A HG EA+ F M + L P+ +TFL VL+ACSHGG+V++G
Sbjct: 252 KKNTVTWNTMILGLASHGYANEALALFSNMLEQKLWAPDDITFLVVLSACSHGGMVDKGW 311
Query: 332 NFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACS 391
FFD M +E + P IKHYGC++D+LGRAG +E+A + +P + + +VWRTLL AC
Sbjct: 312 RFFDIMKKEYHIQPTIKHYGCMVDILGRAGFVEEAYRLISNMPMQ-CNAIVWRTLLAACR 370
Query: 392 FHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKV-PG 450
HGNVE+G++V +++LE+E + DYVL+ N A GR+ +A R+R+ M +R K PG
Sbjct: 371 LHGNVELGKQVRKQLLELEPDHSSDYVLLANTYASAGRWNEAMRVRKTMHKRGVQKPEPG 430
Query: 451 CSLV 454
S+V
Sbjct: 431 NSVV 434
>gi|359481906|ref|XP_003632690.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35030,
mitochondrial-like [Vitis vinifera]
Length = 635
Score = 267 bits (682), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 138/345 (40%), Positives = 210/345 (60%), Gaps = 8/345 (2%)
Query: 113 TALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVV 172
A++ Y L ++ LF+ MPER+L +WN MITGL++ G+L AR LF EMP +NV+
Sbjct: 243 NAMITGYAQNLRLDEALDLFERMPERDLPSWNTMITGLIQNGDLRRARKLFNEMPKKNVI 302
Query: 173 SWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGY 232
SWT +I G + S EAL +F +M++ +P++ T ++VL A + Q +H
Sbjct: 303 SWTTMITGCVQEGESEEALKIFSRMLSTNGAKPNQGTFVSVLGACSNLAGLGEGQQVHQI 362
Query: 233 GEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMG 292
K + V++ LI+ Y+KCG + +A K+F+D +++LVSW II+ +A HG G
Sbjct: 363 ISKTVYQDSTF-VVSALINMYSKCGELGTARKMFDDGMTSQRDLVSWNGIIAAYAHHGYG 421
Query: 293 KEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGC 352
KEA+ F M+K G KP+ VT++ +L+ACSH GLVEEGL +FD++V++ +L HY C
Sbjct: 422 KEAINFFKEMRKSGFKPDDVTYVGLLSACSHAGLVEEGLKYFDELVKDRSILVREDHYAC 481
Query: 353 LIDMLGRAGRLEQAEKTALGIPSEI---TDVVVWRTLLGACSFHGNVEMGERVTRKILEM 409
L+D+ GRAGRL K A G + VW LL C+ H NV++G++ +K+LE+
Sbjct: 482 LVDLCGRAGRL----KEAFGFIERLETKPSARVWGALLAGCNVHANVKIGKQAAKKLLEV 537
Query: 410 ERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
E G Y+L+ NI A G++ +A R+R M ++ K PGCS +
Sbjct: 538 EPENAGTYLLLSNIYASTGKWREAARVRLKMKDKGLKKQPGCSWI 582
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 105/372 (28%), Positives = 172/372 (46%), Gaps = 39/372 (10%)
Query: 99 VISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEF 158
+ +V + +V TA+V Y+ + D+ KLF+EMP +N+V+WN MI G + G ++
Sbjct: 105 LFDRVDAKKNVVTWTAMVGGYIRSNKISDAEKLFNEMPNKNVVSWNTMIDGYAQNGRIDS 164
Query: 159 ARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIW 218
A LFE+MP RNVVSW ++ + R EA LF +M E I+ A++ +
Sbjct: 165 AMYLFEKMPERNVVSWNTVMSMLAQCGRIEEARRLFDRM-----PERDVISWTAMIAGLS 219
Query: 219 QNGDVKSCQLIHGYGEKRGFTAF--------------------------DIRVLNCLIDT 252
+NG + +L+ +R ++ D+ N +I
Sbjct: 220 KNGRIDEARLLFDRMPERNVVSWNAMITGYAQNLRLDEALDLFERMPERDLPSWNTMITG 279
Query: 253 YAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKV-GLKPNR 311
+ G + A KLF ++ +KN++SWT++I+G G +EA++ F RM G KPN+
Sbjct: 280 LIQNGDLRRARKLFNEMP--KKNVISWTTMITGCVQEGESEEALKIFSRMLSTNGAKPNQ 337
Query: 312 VTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTAL 371
TF+SVL ACS+ + EG +++ + LI+M + G L A K
Sbjct: 338 GTFVSVLGACSNLAGLGEGQQVH-QIISKTVYQDSTFVVSALINMYSKCGELGTARKMFD 396
Query: 372 GIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMER-GYGGDYVLMYNILAGVGRF 430
+ D+V W ++ A + HG G+ EM + G+ D V +L+
Sbjct: 397 DGMTSQRDLVSWNGIIAAYAHHG---YGKEAINFFKEMRKSGFKPDDVTYVGLLSACSHA 453
Query: 431 GDAERLRRVMDE 442
G E + DE
Sbjct: 454 GLVEEGLKYFDE 465
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 80/323 (24%), Positives = 166/323 (51%), Gaps = 26/323 (8%)
Query: 123 GFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPC-RNVVSWTGIIDGY 181
G + ++ +LFDEM E +++TW +I+G +K G +E AR LF+ + +NVV+WT ++ GY
Sbjct: 66 GRIMEARRLFDEMREPDVITWTTVISGYIKCGMIEEARRLFDRVDAKKNVVTWTAMVGGY 125
Query: 182 TRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAF 241
R N+ ++A LF +M + ++ ++ QNG + S + +R ++
Sbjct: 126 IRSNKISDAEKLFNEM-----PNKNVVSWNTMIDGYAQNGRIDSAMYLFEKMPERNVVSW 180
Query: 242 DIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGR 301
N ++ A+CG I A +LF+ + ++++SWT++I+G + +G EA F R
Sbjct: 181 -----NTVMSMLAQCGRIEEARRLFD--RMPERDVISWTAMIAGLSKNGRIDEARLLFDR 233
Query: 302 MQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAG 361
M + N V++ +++ + ++E L+ F++M E D+ + +I L + G
Sbjct: 234 MP----ERNVVSWNAMITGYAQNLRLDEALDLFERMPER-----DLPSWNTMITGLIQNG 284
Query: 362 RLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEME--RGYGGDYVL 419
L +A K +P + +V+ W T++ C G E ++ ++L + G +V
Sbjct: 285 DLRRARKLFNEMPKK--NVISWTTMITGCVQEGESEEALKIFSRMLSTNGAKPNQGTFVS 342
Query: 420 MYNILAGVGRFGDAERLRRVMDE 442
+ + + G+ +++ +++ +
Sbjct: 343 VLGACSNLAGLGEGQQVHQIISK 365
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 98/240 (40%), Gaps = 60/240 (25%)
Query: 76 TYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDE- 134
T+ ++ C+ L+ G Q+H +ISK +Q +V +AL+NMY G L + K+FD+
Sbjct: 339 TFVSVLGACSNLAGLGEGQQVHQIISKTVYQDSTFVVSALINMYSKCGELGTARKMFDDG 398
Query: 135 -MPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALAL 193
+R+LV+WN GII Y EA+
Sbjct: 399 MTSQRDLVSWN-------------------------------GIIAAYAHHGYGKEAINF 427
Query: 194 FRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLN------ 247
F++M + +P ++T + +L A G V+ G FD V +
Sbjct: 428 FKEMRKSGF-KPDDVTYVGLLSACSHAGLVEE-----------GLKYFDELVKDRSILVR 475
Query: 248 -----CLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHG---MGKEAVENF 299
CL+D + G + A E + + V W ++++G +H +GK+A +
Sbjct: 476 EDHYACLVDLCGRAGRLKEAFGFIERLETKPSARV-WGALLAGCNVHANVKIGKQAAKKL 534
>gi|297811669|ref|XP_002873718.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297319555|gb|EFH49977.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 548
Score = 267 bits (682), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 157/456 (34%), Positives = 252/456 (55%), Gaps = 50/456 (10%)
Query: 35 NTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLGT 94
N +L + + P+K LY ++++ SP D +T++F+++ C+ L + G
Sbjct: 81 NHVLRGSAQSLKPEKTVALYTEMEK---RGVSP-----DRYTFTFVLKACSKLEWRSNGF 132
Query: 95 QLHAVISKVGFQSHVYVNTALV-------------------------------NMYVSLG 123
+H + + GF + YV AL+ + Y G
Sbjct: 133 AIHGKVVRHGFLLNEYVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRG 192
Query: 124 FLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTR 183
+ ++ +LFDEMP+++ V WNVMITG +K E++ AR LF+ ++VV+W +I GY
Sbjct: 193 KIDEAMRLFDEMPDKDQVAWNVMITGCLKCREMDSARELFDRFTEKDVVTWNAMISGYVN 252
Query: 184 MNRSNEALALFRKMV-ACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFD 242
EAL++F++M A E+ P +TIL++L A GD+++ + +H Y + +
Sbjct: 253 CGYPKEALSIFKEMRDAGEH--PDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSS 310
Query: 243 IRV----LNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVEN 298
I V N LID YAKCG I A ++F ++ ++L +W ++I G A+H + +VE
Sbjct: 311 IYVGTPIWNALIDMYAKCGSIDRAIEVFR--GMKDRDLSTWNTLIVGLALH-HAEGSVEM 367
Query: 299 FGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLG 358
F MQ++ + PN VTF+ V+ ACSH G V+EG +F M + + P+IKHYGC++DMLG
Sbjct: 368 FEEMQRLKVWPNEVTFIGVILACSHSGRVDEGRKYFSLMRDMYNIEPNIKHYGCMVDMLG 427
Query: 359 RAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYV 418
RAG LE+A + E + +VWRTLLGAC +GNVE+G+ K+L M + GDYV
Sbjct: 428 RAGLLEEAFMFVESMKIE-PNAIVWRTLLGACKIYGNVELGKYANEKLLSMRKDESGDYV 486
Query: 419 LMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
L+ NI A G++ +++R++ D+ K G SL+
Sbjct: 487 LLSNIYASTGQWDGVQKVRKMFDDTRVKKPTGISLI 522
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 92/349 (26%), Positives = 163/349 (46%), Gaps = 44/349 (12%)
Query: 95 QLHAVISKVGFQSHVYVNTALV-NMYVSL-GFLKDSSKLFDEMPERNLVTWNVMITGLVK 152
Q+HA + G S++ V L+ + +S+ G LK + KLF+E+P+ ++ N ++ G +
Sbjct: 30 QIHAFMVVNGLMSNLSVVGELIYSASLSVPGALKYAHKLFEEIPKPDVSICNHVLRGSAQ 89
Query: 153 WGELEFARSLFEEMPCRNV----VSWTGIIDGYTRMNRSNEALALFRKMVA-----CEYT 203
+ E +L+ EM R V ++T ++ +++ + A+ K+V EY
Sbjct: 90 SLKPEKTVALYTEMEKRGVSPDRYTFTFVLKACSKLEWRSNGFAIHGKVVRHGFLLNEYV 149
Query: 204 EPSEITI------LAVLPAIWQNG----DVKSCQLIHGYGEKRGFTAFDIRVL------- 246
+ + I L + ++ + V + GY KRG +R+
Sbjct: 150 KNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYA-KRGKIDEAMRLFDEMPDKD 208
Query: 247 ----NCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRM 302
N +I KC + SA +LF+ + K++V+W ++ISG+ G KEA+ F M
Sbjct: 209 QVAWNVMITGCLKCREMDSARELFDRFT--EKDVVTWNAMISGYVNCGYPKEALSIFKEM 266
Query: 303 QKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDI----KHYGCLIDMLG 358
+ G P+ VT LS+L+AC+ G +E G ++E V I + LIDM
Sbjct: 267 RDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYA 326
Query: 359 RAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFH---GNVEMGERVTR 404
+ G +++A + G+ D+ W TL+ + H G+VEM E + R
Sbjct: 327 KCGSIDRAIEVFRGMKDR--DLSTWNTLIVGLALHHAEGSVEMFEEMQR 373
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 83/307 (27%), Positives = 134/307 (43%), Gaps = 37/307 (12%)
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
G L++A LFEE+P +V ++ G + + + +AL+ +M P T V
Sbjct: 60 GALKYAHKLFEEIPKPDVSICNHVLRGSAQSLKPEKTVALYTEMEK-RGVSPDRYTFTFV 118
Query: 214 LPAI----WQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDI 269
L A W++ IHG + GF + V N LI +A CG + AS+LF+D
Sbjct: 119 LKACSKLEWRSNGFA----IHGKVVRHGFL-LNEYVKNALILFHANCGDLGIASELFDDS 173
Query: 270 SVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEE 329
+ K V+W+S+ SG+A G EA+ F M ++V + ++ C ++
Sbjct: 174 AKAHK--VAWSSMTSGYAKRGKIDEAMRLFDEMP----DKDQVAWNVMITGCLKCREMDS 227
Query: 330 GLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEI------TDVVVW 383
FD+ E+ D+ + +I G K AL I E+ DVV
Sbjct: 228 ARELFDRFTEK-----DVVTWNAMISGYVNCG----YPKEALSIFKEMRDAGEHPDVVTI 278
Query: 384 RTLLGACSFHGNVEMGERVTRKILEMERGYGGDYV------LMYNILAGVGRFGDAERLR 437
+LL AC+ G++E G+R+ ILE YV + ++ A G A +
Sbjct: 279 LSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVF 338
Query: 438 RVMDERN 444
R M +R+
Sbjct: 339 RGMKDRD 345
>gi|356567012|ref|XP_003551717.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g44880-like [Glycine max]
Length = 599
Score = 267 bits (682), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 162/484 (33%), Positives = 253/484 (52%), Gaps = 74/484 (15%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNL 92
L N+++ + A + F L++ L++ P P D +T++ L++ CAT
Sbjct: 90 LCNSMIAAHFAARQFSQPFTLFRDLRR----QAPPFTP--DGYTFTALVKGCATRVATGE 143
Query: 93 GTQLHAVISKVGFQSHVYVNTALVNMYVSLGFL--------------------------- 125
GT LH ++ K G +YV TALV+MYV G L
Sbjct: 144 GTLLHGMVLKNGVCFDLYVATALVDMYVKFGVLGSARKVFDEMSVRSKVSWTAVIVGYAR 203
Query: 126 ----KDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWT------ 175
++ +LFDEM +R++V +N MI G VK G + AR LF EM RNVVSWT
Sbjct: 204 CGDMSEARRLFDEMEDRDIVAFNAMIDGYVKMGCVGLARELFNEMRERNVVSWTSMVSGY 263
Query: 176 -------------------------GIIDGYTRMNRSNEALALFRKMVACEYTEPSEITI 210
+I GY + RS++AL LFR+M EP+E+T+
Sbjct: 264 CGNGDVENAKLMFDLMPEKNVFTWNAMIGGYCQNRRSHDALELFREMQTAS-VEPNEVTV 322
Query: 211 LAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDIS 270
+ VLPA+ G + + IH + ++ R+ LID YAKCG I A FE ++
Sbjct: 323 VCVLPAVADLGALDLGRWIHRFALRKKLDR-SARIGTALIDMYAKCGEITKAKLAFEGMT 381
Query: 271 VERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEG 330
+ SW ++I+GFA++G KEA+E F RM + G PN VT + VL+AC+H GLVEEG
Sbjct: 382 --ERETASWNALINGFAVNGCAKEALEVFARMIEEGFGPNEVTMIGVLSACNHCGLVEEG 439
Query: 331 LNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGAC 390
+F+ M E + P ++HYGC++D+LGRAG L++AE +P + +++ + L AC
Sbjct: 440 RRWFNAM-ERFGIAPQVEHYGCMVDLLGRAGCLDEAENLIQTMPYDANGIIL-SSFLFAC 497
Query: 391 SFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPG 450
+ +V ERV +++++M+ G+YV++ N+ A R+ D E ++++M +R K
Sbjct: 498 GYFNDVLRAERVLKEVVKMDEDVAGNYVMLRNLYATRQRWTDVEDVKQMMKKRGTSKEVA 557
Query: 451 CSLV 454
CS++
Sbjct: 558 CSVI 561
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 107/420 (25%), Positives = 162/420 (38%), Gaps = 88/420 (20%)
Query: 81 IRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNL 140
I C T S P L Q+HA I + S++ + TA V SL +R L
Sbjct: 22 ILQCRTKSIPTL-LQIHAFILRHSLHSNLNLLTAFVTTCASLA----------ASAKRPL 70
Query: 141 VTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKM--V 198
N AR F R+ +I + + ++ LFR +
Sbjct: 71 AIIN-------------HARRFFNATHTRDTFLCNSMIAAHFAARQFSQPFTLFRDLRRQ 117
Query: 199 ACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGC 258
A +T P T A++ L+HG K G FD+ V L+D Y K G
Sbjct: 118 APPFT-PDGYTFTALVKGCATRVATGEGTLLHGMVLKNG-VCFDLYVATALVDMYVKFGV 175
Query: 259 IFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEA------------------VENFG 300
+ SA K+F+++SV K VSWT++I G+A G EA ++ +
Sbjct: 176 LGSARKVFDEMSVRSK--VSWTAVIVGYARCGDMSEARRLFDEMEDRDIVAFNAMIDGYV 233
Query: 301 RMQKVGL---------KPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYG 351
+M VGL + N V++ S+++ G VE FD M E+ ++ +
Sbjct: 234 KMGCVGLARELFNEMRERNVVSWTSMVSGYCGNGDVENAKLMFDLMPEK-----NVFTWN 288
Query: 352 CLIDMLGRAGRLEQA------EKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERV--- 402
+I + R A +TA P+E+T V V L A + G +++G +
Sbjct: 289 AMIGGYCQNRRSHDALELFREMQTASVEPNEVTVVCV----LPAVADLGALDLGRWIHRF 344
Query: 403 -TRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDER---------NAFKVPGCS 452
RK L+ G + MY A G A+ M ER N F V GC+
Sbjct: 345 ALRKKLDRSARIGTALIDMY---AKCGEITKAKLAFEGMTERETASWNALINGFAVNGCA 401
>gi|42567862|ref|NP_197034.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635759|sp|Q9LXF2.2|PP385_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g15300
gi|332004762|gb|AED92145.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 548
Score = 266 bits (681), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 157/456 (34%), Positives = 250/456 (54%), Gaps = 50/456 (10%)
Query: 35 NTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLGT 94
N +L + + P+K LY ++++ SP D +T++F+++ C+ L + G
Sbjct: 81 NHVLRGSAQSMKPEKTVSLYTEMEK---RGVSP-----DRYTFTFVLKACSKLEWRSNGF 132
Query: 95 QLHAVISKVGFQSHVYVNTALV-------------------------------NMYVSLG 123
H + + GF + YV AL+ + Y G
Sbjct: 133 AFHGKVVRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRG 192
Query: 124 FLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTR 183
+ ++ +LFDEMP ++ V WNVMITG +K E++ AR LF+ ++VV+W +I GY
Sbjct: 193 KIDEAMRLFDEMPYKDQVAWNVMITGCLKCKEMDSARELFDRFTEKDVVTWNAMISGYVN 252
Query: 184 MNRSNEALALFRKMV-ACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFD 242
EAL +F++M A E+ P +TIL++L A GD+++ + +H Y + +
Sbjct: 253 CGYPKEALGIFKEMRDAGEH--PDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSS 310
Query: 243 IRV----LNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVEN 298
I V N LID YAKCG I A ++F V+ ++L +W ++I G A+H + ++E
Sbjct: 311 IYVGTPIWNALIDMYAKCGSIDRAIEVFR--GVKDRDLSTWNTLIVGLALH-HAEGSIEM 367
Query: 299 FGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLG 358
F MQ++ + PN VTF+ V+ ACSH G V+EG +F M + + P+IKHYGC++DMLG
Sbjct: 368 FEEMQRLKVWPNEVTFIGVILACSHSGRVDEGRKYFSLMRDMYNIEPNIKHYGCMVDMLG 427
Query: 359 RAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYV 418
RAG+LE+A + E + +VWRTLLGAC +GNVE+G+ K+L M + GDYV
Sbjct: 428 RAGQLEEAFMFVESMKIE-PNAIVWRTLLGACKIYGNVELGKYANEKLLSMRKDESGDYV 486
Query: 419 LMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
L+ NI A G++ +++R++ D+ K G SL+
Sbjct: 487 LLSNIYASTGQWDGVQKVRKMFDDTRVKKPTGVSLI 522
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 93/349 (26%), Positives = 162/349 (46%), Gaps = 44/349 (12%)
Query: 95 QLHAVISKVGFQSHVYVNTALV-NMYVSL-GFLKDSSKLFDEMPERNLVTWNVMITGLVK 152
Q+HA + G S++ V L+ + +S+ G LK + KLFDE+P+ ++ N ++ G +
Sbjct: 30 QIHASMVVNGLMSNLSVVGELIYSASLSVPGALKYAHKLFDEIPKPDVSICNHVLRGSAQ 89
Query: 153 WGELEFARSLFEEMPCRNV----VSWTGIIDGYTRMNRSNEALALFRKMVA-----CEYT 203
+ E SL+ EM R V ++T ++ +++ + A K+V EY
Sbjct: 90 SMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACSKLEWRSNGFAFHGKVVRHGFVLNEYV 149
Query: 204 EPSEITI------LAVLPAIWQNG----DVKSCQLIHGYGEKRGFTAFDIRVL------- 246
+ + I L + ++ + V + GY KRG +R+
Sbjct: 150 KNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYA-KRGKIDEAMRLFDEMPYKD 208
Query: 247 ----NCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRM 302
N +I KC + SA +LF+ + K++V+W ++ISG+ G KEA+ F M
Sbjct: 209 QVAWNVMITGCLKCKEMDSARELFDRFT--EKDVVTWNAMISGYVNCGYPKEALGIFKEM 266
Query: 303 QKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDI----KHYGCLIDMLG 358
+ G P+ VT LS+L+AC+ G +E G ++E V I + LIDM
Sbjct: 267 RDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYA 326
Query: 359 RAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFH---GNVEMGERVTR 404
+ G +++A + G+ D+ W TL+ + H G++EM E + R
Sbjct: 327 KCGSIDRAIEVFRGVKDR--DLSTWNTLIVGLALHHAEGSIEMFEEMQR 373
>gi|7671499|emb|CAB89340.1| putative protein [Arabidopsis thaliana]
Length = 514
Score = 266 bits (681), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 157/456 (34%), Positives = 250/456 (54%), Gaps = 50/456 (10%)
Query: 35 NTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLGT 94
N +L + + P+K LY ++++ SP D +T++F+++ C+ L + G
Sbjct: 47 NHVLRGSAQSMKPEKTVSLYTEMEK---RGVSP-----DRYTFTFVLKACSKLEWRSNGF 98
Query: 95 QLHAVISKVGFQSHVYVNTALV-------------------------------NMYVSLG 123
H + + GF + YV AL+ + Y G
Sbjct: 99 AFHGKVVRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRG 158
Query: 124 FLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTR 183
+ ++ +LFDEMP ++ V WNVMITG +K E++ AR LF+ ++VV+W +I GY
Sbjct: 159 KIDEAMRLFDEMPYKDQVAWNVMITGCLKCKEMDSARELFDRFTEKDVVTWNAMISGYVN 218
Query: 184 MNRSNEALALFRKMV-ACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFD 242
EAL +F++M A E+ P +TIL++L A GD+++ + +H Y + +
Sbjct: 219 CGYPKEALGIFKEMRDAGEH--PDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSS 276
Query: 243 IRV----LNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVEN 298
I V N LID YAKCG I A ++F V+ ++L +W ++I G A+H + ++E
Sbjct: 277 IYVGTPIWNALIDMYAKCGSIDRAIEVFR--GVKDRDLSTWNTLIVGLALH-HAEGSIEM 333
Query: 299 FGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLG 358
F MQ++ + PN VTF+ V+ ACSH G V+EG +F M + + P+IKHYGC++DMLG
Sbjct: 334 FEEMQRLKVWPNEVTFIGVILACSHSGRVDEGRKYFSLMRDMYNIEPNIKHYGCMVDMLG 393
Query: 359 RAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYV 418
RAG+LE+A + E + +VWRTLLGAC +GNVE+G+ K+L M + GDYV
Sbjct: 394 RAGQLEEAFMFVESMKIE-PNAIVWRTLLGACKIYGNVELGKYANEKLLSMRKDESGDYV 452
Query: 419 LMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
L+ NI A G++ +++R++ D+ K G SL+
Sbjct: 453 LLSNIYASTGQWDGVQKVRKMFDDTRVKKPTGVSLI 488
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 85/319 (26%), Positives = 146/319 (45%), Gaps = 42/319 (13%)
Query: 123 GFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNV----VSWTGII 178
G LK + KLFDE+P+ ++ N ++ G + + E SL+ EM R V ++T ++
Sbjct: 26 GALKYAHKLFDEIPKPDVSICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVL 85
Query: 179 DGYTRMNRSNEALALFRKMVA-----CEYTEPSEITI------LAVLPAIWQNG----DV 223
+++ + A K+V EY + + I L + ++ + V
Sbjct: 86 KACSKLEWRSNGFAFHGKVVRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKV 145
Query: 224 KSCQLIHGYGEKRGFTAFDIRVL-----------NCLIDTYAKCGCIFSASKLFEDISVE 272
+ GY KRG +R+ N +I KC + SA +LF+ +
Sbjct: 146 AWSSMTSGYA-KRGKIDEAMRLFDEMPYKDQVAWNVMITGCLKCKEMDSARELFDRFT-- 202
Query: 273 RKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLN 332
K++V+W ++ISG+ G KEA+ F M+ G P+ VT LS+L+AC+ G +E G
Sbjct: 203 EKDVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKR 262
Query: 333 FFDKMVEECEVLPDI----KHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLG 388
++E V I + LIDM + G +++A + G+ D+ W TL+
Sbjct: 263 LHIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKDR--DLSTWNTLIV 320
Query: 389 ACSFH---GNVEMGERVTR 404
+ H G++EM E + R
Sbjct: 321 GLALHHAEGSIEMFEEMQR 339
>gi|359479098|ref|XP_002274209.2| PREDICTED: pentatricopeptide repeat-containing protein At1g05750,
chloroplastic-like [Vitis vinifera]
Length = 518
Score = 266 bits (681), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 152/383 (39%), Positives = 227/383 (59%), Gaps = 8/383 (2%)
Query: 75 FTYSFLIRTCATLSHPNL--GTQLHAVISKVGFQS-HVYVNTALVNMYVSLGFLKDSSKL 131
T+ L+ C L G +HA + K+G + +V V TALV+MY G L + +
Sbjct: 90 ITFLTLLSACTDFPLEGLRFGGSIHAYVRKLGLDTENVMVGTALVDMYSKCGQLDLAWLM 149
Query: 132 FDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEAL 191
FDEM RN V+WN MI G ++ GE+ A LF++M R+ +SWT +I G+ + +AL
Sbjct: 150 FDEMHVRNSVSWNTMIDGCMRNGEVGEAIVLFDQMSERDAISWTSMIGGFVKKGCFEQAL 209
Query: 192 ALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLID 251
FR+M EP +TI++VL A G + I+ + K+ F +I++ N LID
Sbjct: 210 EWFREM-QLAGVEPDYVTIISVLAACANLGALGLGLWINRFVMKQDFKD-NIKISNSLID 267
Query: 252 TYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNR 311
Y++CGCI A ++FE + +++LVSW S+I GFA++G +EA+E F M+K G +P+
Sbjct: 268 MYSRCGCIRLARQVFEQMP--KRSLVSWNSMIVGFALNGHAEEALEFFNLMRKEGFRPDG 325
Query: 312 VTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTAL 371
V+F L ACSH GLV+EGL FFD M ++ P I+HYGCL+D+ RAGRLE A
Sbjct: 326 VSFTGALTACSHSGLVDEGLQFFDIMKRTRKISPRIEHYGCLVDLYSRAGRLEDALNVIA 385
Query: 372 GIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFG 431
+P + +VV+ +LL AC HG+V + ER+ + + E++ G +YVL+ NI A VGR+
Sbjct: 386 NMPMKPNEVVL-GSLLAACRTHGDVGLAERLMKYLCEVDPGSDSNYVLLSNIYAAVGRWD 444
Query: 432 DAERLRRVMDERNAFKVPGCSLV 454
A ++R+ M K PG S +
Sbjct: 445 GASKVRKKMKALGIHKKPGFSSI 467
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 121/262 (46%), Gaps = 35/262 (13%)
Query: 167 PCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAI--WQNGDVK 224
P +VSWT I + R + EA A F +M P+ IT L +L A + ++
Sbjct: 50 PIDPIVSWTSSIALHCRNGQLPEAAAEFSRM-QIAGVRPNHITFLTLLSACTDFPLEGLR 108
Query: 225 SCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVE------------ 272
IH Y K G ++ V L+D Y+KCG + A +F+++ V
Sbjct: 109 FGGSIHAYVRKLGLDTENVMVGTALVDMYSKCGQLDLAWLMFDEMHVRNSVSWNTMIDGC 168
Query: 273 -----------------RKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFL 315
++ +SWTS+I GF G ++A+E F MQ G++P+ VT +
Sbjct: 169 MRNGEVGEAIVLFDQMSERDAISWTSMIGGFVKKGCFEQALEWFREMQLAGVEPDYVTII 228
Query: 316 SVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPS 375
SVL AC++ G + GL + ++ V + + +IK LIDM R G + A + +P
Sbjct: 229 SVLAACANLGALGLGL-WINRFVMKQDFKDNIKISNSLIDMYSRCGCIRLARQVFEQMPK 287
Query: 376 EITDVVVWRTLLGACSFHGNVE 397
+V W +++ + +G+ E
Sbjct: 288 R--SLVSWNSMIVGFALNGHAE 307
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 74/314 (23%), Positives = 118/314 (37%), Gaps = 91/314 (28%)
Query: 73 DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLF 132
D T ++ CA L LG ++ + K F+ ++ ++ +L++MY G ++ + ++F
Sbjct: 223 DYVTIISVLAACANLGALGLGLWINRFVMKQDFKDNIKISNSLIDMYSRCGCIRLARQVF 282
Query: 133 DEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCR----NVVSWTGIIDGYTRMNRSN 188
++MP+R+LV+WN MI G G E A F M + VS+TG + + +
Sbjct: 283 EQMPKRSLVSWNSMIVGFALNGHAEEALEFFNLMRKEGFRPDGVSFTGALTACSHSGLVD 342
Query: 189 EALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNC 248
E L F M P I YG C
Sbjct: 343 EGLQFFDIMKRTRKISPR----------------------IEHYG--------------C 366
Query: 249 LIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLK 308
L+D Y++ G + A + ++ +K
Sbjct: 367 LVDLYSRAGRLEDALNVIANMP------------------------------------MK 390
Query: 309 PNRVTFLSVLNAC-SHG--GLVEEGLNFFDKMVEECEVLP-DIKHYGCLIDMLGRAGRLE 364
PN V S+L AC +HG GL E + + CEV P +Y L ++ GR +
Sbjct: 391 PNEVVLGSLLAACRTHGDVGLAERLMKYL------CEVDPGSDSNYVLLSNIYAAVGRWD 444
Query: 365 QAEKT-----ALGI 373
A K ALGI
Sbjct: 445 GASKVRKKMKALGI 458
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 67/131 (51%), Gaps = 10/131 (7%)
Query: 276 LVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFD 335
+VSWTS I+ +G EA F RMQ G++PN +TFL++L+AC+ L EGL F
Sbjct: 54 IVSWTSSIALHCRNGQLPEAAAEFSRMQIAGVRPNHITFLTLLSACTDFPL--EGLRFGG 111
Query: 336 KMVEECEVL----PDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACS 391
+ L ++ L+DM + G+L+ A + + + V W T++ C
Sbjct: 112 SIHAYVRKLGLDTENVMVGTALVDMYSKCGQLDLA--WLMFDEMHVRNSVSWNTMIDGCM 169
Query: 392 FHGNVEMGERV 402
+G E+GE +
Sbjct: 170 RNG--EVGEAI 178
>gi|242042081|ref|XP_002468435.1| hypothetical protein SORBIDRAFT_01g045890 [Sorghum bicolor]
gi|241922289|gb|EER95433.1| hypothetical protein SORBIDRAFT_01g045890 [Sorghum bicolor]
Length = 506
Score = 266 bits (681), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 152/435 (34%), Positives = 255/435 (58%), Gaps = 29/435 (6%)
Query: 29 HHSQLFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLS 88
H + +NTL+ ++++ SP L+ +++ +P D+FT++F++++C+
Sbjct: 80 HLAFFYNTLIRGFAVSSSPSAGIELFTAMRRA---GAAP-----DAFTFTFVLKSCSRCH 131
Query: 89 HP-NLGTQLHAVISKVGFQS----HVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTW 143
P L + LHA K G S HV+V+ AL++ Y S + D+ ++FDEMP R++V++
Sbjct: 132 SPGRLPSDLHAQAFKHGCLSARSEHVHVHNALLHAYASRSAVDDAHRVFDEMPVRDVVSF 191
Query: 144 NVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYT 203
+ ++T +K +L+ AR +F++MP R+VVSWT +I Y R +R +ALALF M
Sbjct: 192 SGLLTAHLKNNQLDSARMVFDQMPHRDVVSWTAMISAYARASRPQDALALFDAMP----V 247
Query: 204 EPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSAS 263
+P E+T+++V+ A GD+ + + + Y + GF + + + N L+D YAKCGC+ A
Sbjct: 248 QPDEVTMVSVVSACTALGDLATGERLRLYVDSNGF-GWMVSLRNALMDMYAKCGCLPEAR 306
Query: 264 KLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRM--QKVGLKPNRVTFLSVLNAC 321
+LF+ +++ ++L SW ++I +A HG + + F +M +KP+ VT L+VL
Sbjct: 307 ELFDGMAI--RSLASWNTLILAYASHGDEESTIALFHQMLAHDNSVKPDGVTLLAVLTMY 364
Query: 322 SHGGLVEEGLNFFDKMV--EECEVLPDIKHYGCLIDMLGRAGRLEQAEKT--ALGIPSEI 377
+H G VEEG FD M + +V ++HYGC++D+L RAG LE+A K + IPS
Sbjct: 365 AHKGCVEEGRTVFDAMQRGDYGKVELTVEHYGCMVDLLSRAGHLEEAYKMIEQMSIPS-- 422
Query: 378 TDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLR 437
+ VVW LLGAC HGN++M E+ +K+ + GG Y+L+ ++ GR +A +R
Sbjct: 423 -NDVVWGVLLGACRMHGNIDMAEKAVQKLRILNPHEGGYYILLIDMYTAAGRTAEAMEVR 481
Query: 438 RVMDERNAFKVPGCS 452
R M++ A K G S
Sbjct: 482 RTMNKTRAKKTTGWS 496
>gi|357154550|ref|XP_003576820.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Brachypodium distachyon]
Length = 657
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 153/419 (36%), Positives = 237/419 (56%), Gaps = 13/419 (3%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+NT++ Y+ A +A L+ +++ H L L D FT L+ C++ + +G
Sbjct: 183 WNTMIGGYAQAGEVSEACALFGEMR------HQGL--LADVFTLVSLLFACSSEGNLEVG 234
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
+H + G + + AL++MY G L + + FD MP +N+VTW M+ K
Sbjct: 235 RLVHCHMLVSGSRVDRILGNALLDMYGKCGDLWMAHRCFDMMPIKNVVTWTSMLCAQAKH 294
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
G ++ R FE+MP RN+VSW +I Y + R +E L L+ +M + T P E T+ V
Sbjct: 295 GSVDAVRDWFEQMPERNIVSWNAMISCYVQCGRLHETLDLYNRMRSLGIT-PDEFTLAGV 353
Query: 214 LPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVER 273
L A QNGD+ S ++IH Y + F + +LN L+D YA+CG + +A LF ++
Sbjct: 354 LSACGQNGDLASGKMIHCY-VRDNFNDPGVTLLNSLLDMYARCGQVDTAIGLFTEMP--N 410
Query: 274 KNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNF 333
KN++SW II AMHG +E V F M P+ +TF+ +L+ACSHGGL+E G +
Sbjct: 411 KNVISWNVIIGALAMHGRAQETVTFFRTMVSDAFSPDEITFVGLLSACSHGGLLEAGEYY 470
Query: 334 FDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFH 393
F+ M V P+++HYGC++D+LGR G L +A + + DVVVW LLGAC H
Sbjct: 471 FEAMARVYNVEPEVEHYGCMVDLLGRRGHLAKAVNLIKDMSIK-PDVVVWGALLGACRIH 529
Query: 394 GNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCS 452
GNVE+G+ V +++LE+E GG +VL+ N+ ++ D ++LR++M E+ K G S
Sbjct: 530 GNVEIGKLVIKQLLELEGITGGLFVLICNLFYETNQWEDMKKLRKLMKEQGTKKDMGVS 588
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 104/401 (25%), Positives = 187/401 (46%), Gaps = 87/401 (21%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNL 92
++NTL+ YS ++ PQ+A L++ + Q LP + FT F+++ C T+
Sbjct: 81 MYNTLVRAYSNSDCPQEALRLHRGVLQ-----RGILP---NEFTLPFVLKACTTVRAVEH 132
Query: 93 GTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVK 152
H V+ K+GF ++V AL++ + S G L+DS + F EM +RN+V+WN MI G +
Sbjct: 133 ALAAHGVVVKLGFVQQIFVANALLHFHASAGSLRDSRRFFGEMADRNVVSWNTMIGGYAQ 192
Query: 153 WGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILA 212
GE+ A +LF EM + +++ T+++
Sbjct: 193 AGEVSEACALFGEMRHQGLLA--------------------------------DVFTLVS 220
Query: 213 VLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVE 272
+L A G+++ +L+H + G + D + N L+D Y KCG ++ A + F+ + ++
Sbjct: 221 LLFACSSEGNLEVGRLVHCHMLVSG-SRVDRILGNALLDMYGKCGDLWMAHRCFDMMPIK 279
Query: 273 -----------------------------RKNLVSWTSIISGFAMHGMGKEAVENFGRMQ 303
+N+VSW ++IS + G E ++ + RM+
Sbjct: 280 NVVTWTSMLCAQAKHGSVDAVRDWFEQMPERNIVSWNAMISCYVQCGRLHETLDLYNRMR 339
Query: 304 KVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVL-----PDIKHYGCLIDMLG 358
+G+ P+ T VL+AC G + G KM+ C V P + L+DM
Sbjct: 340 SLGITPDEFTLAGVLSACGQNGDLASG-----KMI-HCYVRDNFNDPGVTLLNSLLDMYA 393
Query: 359 RAGRLEQAEKTALGIPSEI--TDVVVWRTLLGACSFHGNVE 397
R G+++ TA+G+ +E+ +V+ W ++GA + HG +
Sbjct: 394 RCGQVD----TAIGLFTEMPNKNVISWNVIIGALAMHGRAQ 430
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 89/318 (27%), Positives = 143/318 (44%), Gaps = 35/318 (11%)
Query: 80 LIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERN 139
L+R C ++ H + Q+HA + GF V + L+ Y +L +R+
Sbjct: 16 LLRQCRSIQHLD---QIHAHLVVHGFSDVSSVASQLIASYCTL-----------SAGDRD 61
Query: 140 LVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVA 199
G L AR LF+ +P + + ++ Y+ + EAL L R ++
Sbjct: 62 --------------GGLCHARRLFDRIPEPDRFMYNTLVRAYSNSDCPQEALRLHRGVLQ 107
Query: 200 CEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCI 259
P+E T+ VL A V+ HG K GF I V N L+ +A G +
Sbjct: 108 -RGILPNEFTLPFVLKACTTVRAVEHALAAHGVVVKLGFVQ-QIFVANALLHFHASAGSL 165
Query: 260 FSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLN 319
+ + F +++ +N+VSW ++I G+A G EA FG M+ GL + T +S+L
Sbjct: 166 RDSRRFFGEMA--DRNVVSWNTMIGGYAQAGEVSEACALFGEMRHQGLLADVFTLVSLLF 223
Query: 320 ACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITD 379
ACS G +E G M+ + I L+DM G+ G L A + +P I +
Sbjct: 224 ACSSEGNLEVGRLVHCHMLVSGSRVDRILG-NALLDMYGKCGDLWMAHRCFDMMP--IKN 280
Query: 380 VVVWRTLLGACSFHGNVE 397
VV W ++L A + HG+V+
Sbjct: 281 VVTWTSMLCAQAKHGSVD 298
>gi|147810325|emb|CAN65024.1| hypothetical protein VITISV_026273 [Vitis vinifera]
Length = 805
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 155/431 (35%), Positives = 239/431 (55%), Gaps = 26/431 (6%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPN- 91
++N+++ Y L+ SP +A L Y + L +++T+ LI+ C TL +
Sbjct: 351 MYNSMIRGYVLSHSPTRAILCYLDMLNYGL--------LANNYTFPPLIKACTTLGSSSK 402
Query: 92 -LGTQLHAVISKVGFQSHVYVNTALVNMYVSLGF-LKDSSKLFDEMPERNLVTWNVMITG 149
+G +HA + GF +V +AL+ Y SL F + + LFD +P R++V W MI G
Sbjct: 403 LIGCLVHAHVVTFGFDEDPFVVSALIEFY-SLNFDMGTARTLFDRIPNRDVVLWTAMIDG 461
Query: 150 LVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEIT 209
K G++E AR LFE+MP RN +SW+ ++ Y+R+ E L LFR+M T P+E
Sbjct: 462 YGKMGDVEHARILFEDMPERNAISWSAVMAAYSRVGDFKEVLCLFRRMQEAG-TMPNESV 520
Query: 210 ILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDI 269
+++VL A G + +H Y ++ F + I + L+D Y+KCGC+ SA F+ I
Sbjct: 521 LVSVLTACAHLGALAQGLWVHSYAKQCNFDSNPI-LATALVDMYSKCGCVESALSTFQGI 579
Query: 270 SVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEE 329
K+ +W ++ISG AM+G +++E F +M G +P TF++VL AC+H LV E
Sbjct: 580 P--NKDAGAWNAMISGVAMNGDAWKSLELFNKMISNGTQPTETTFVAVLTACTHARLVRE 637
Query: 330 GLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEK------TALGIPSEITDVVVW 383
GL F++M V P +HY CL+D++ RAG L +AEK LG D VW
Sbjct: 638 GLKLFEQMSSNYGVEPQXEHYACLVDLMARAGMLAEAEKFIEEKMGGLG----RGDANVW 693
Query: 384 RTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDER 443
LGAC +GN+E+G RV +K+ +M G +VL YN+ G +A+R+RR++ E
Sbjct: 694 GAXLGACRTYGNIEVGNRVWKKLADMGVADCGTHVLSYNLYREAGWDMEAKRVRRLISEX 753
Query: 444 NAFKVPGCSLV 454
K PGCS++
Sbjct: 754 GMKKKPGCSII 764
>gi|356573508|ref|XP_003554900.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15340,
mitochondrial-like [Glycine max]
Length = 629
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 162/471 (34%), Positives = 254/471 (53%), Gaps = 48/471 (10%)
Query: 16 QIHSHLLTTNSLLHHSQ-LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDS 74
Q+H+ + L S L N LLH Y+ P A L+ ++ HSH DS
Sbjct: 33 QLHAAATVSGLLFSPSSFLLNALLHLYASCPLPSHARKLFDRI----PHSHK------DS 82
Query: 75 FTYSFLIR-------------------------------TCATLSHPNLGTQLHAVISKV 103
Y+ LIR C+ L NL Q+H + K
Sbjct: 83 VDYTALIRCSHPLDALRFYLQMRQRALPLDGVALICALGACSKLGDSNLVPQMHVGVVKF 142
Query: 104 GFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLF 163
GF H V +++ YV G + ++ ++F+E+ E ++V+W V++ G+VK +E + +F
Sbjct: 143 GFLRHTKVLNGVMDGYVKCGLVGEARRVFEEIEEPSVVSWTVVLEGVVKCEGVESGKVVF 202
Query: 164 EEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMV-ACEYT-EPSEITILAVLPAIWQNG 221
+EMP RN V+WT +I GY + EA L ++MV C + + IT+ +VL A Q+G
Sbjct: 203 DEMPERNEVAWTVLIKGYVGSGFTKEAFLLLKEMVFGCGFGFGLNSITLCSVLSACSQSG 262
Query: 222 DVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTS 281
DV + +H Y K + V L+D YAKCG I +A +F + R+N+V+W +
Sbjct: 263 DVSVGRWVHCYAVKAVGWDLGVMVGTSLVDMYAKCGRISAALMVFRHMP--RRNVVAWNA 320
Query: 282 IISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEEC 341
++ G AMHGMGK VE F M + +KP+ VTF+++L++CSH GLVE+G +F +
Sbjct: 321 MLCGLAMHGMGKVVVEMFACMVE-EVKPDAVTFMALLSSCSHSGLVEQGWQYFHDLERAY 379
Query: 342 EVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGER 401
+ P+I+HY C++D+LGRAGRLE+AE +P +VV+ +LLGAC HG + +GE+
Sbjct: 380 GIRPEIEHYACMVDLLGRAGRLEEAEDLVKKLPIPPNEVVLG-SLLGACYAHGKLRLGEK 438
Query: 402 VTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCS 452
+ R++++M+ ++L+ N+ A G+ A LR+V+ R KVPG S
Sbjct: 439 IMRELVQMDPLNTEYHILLSNMYALCGKADKANSLRKVLKNRGIRKVPGMS 489
>gi|449452160|ref|XP_004143828.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g20540-like [Cucumis sativus]
Length = 532
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 142/385 (36%), Positives = 225/385 (58%), Gaps = 8/385 (2%)
Query: 73 DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLF 132
D++T ++++ A +++ +LG +HA K+G + +V +L+ MY S ++ + ++F
Sbjct: 104 DTYTLPYVLKASARMTNIHLGESIHACTIKLGSAVNEFVGNSLLVMYRSFDNMRSARQVF 163
Query: 133 DEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALA 192
DEMPE + V+W VMI G G+++ AR LF+ ++ W +I GY + N E L
Sbjct: 164 DEMPELSAVSWTVMIYGYANMGDVDTARELFDMATVKDTGIWGAMISGYVQNNCFKEGLH 223
Query: 193 LFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDT 252
+FR M E EP E I+ +L A G + + IH Y + G +RV LID
Sbjct: 224 MFRLMQLTE-VEPDEAIIVTILSACAHMGALDTGIWIHRYLGRLGLP-LTLRVSTGLIDM 281
Query: 253 YAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRV 312
YAKCG + A LF ++S +R N V W ++ISG AM G G+ A++ F M+K G+KP+ +
Sbjct: 282 YAKCGHLDLAKYLFNEMS-QRDN-VCWNAMISGMAMDGDGEGAIKLFMEMEKAGIKPDNI 339
Query: 313 TFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALG 372
TF++VL ACS+ G+V+EG+ +++M ++ P +HYGC+ID+L R GR E+AE
Sbjct: 340 TFIAVLAACSNSGMVDEGIRIWNRMSTVHKIEPKSEHYGCVIDLLSRVGRFEEAEGVIQR 399
Query: 373 IP---SEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGR 429
+P S + V WR L AC HG + E ++ ++ER + G YVL+ N+ A +G+
Sbjct: 400 LPKTASPSEEAVAWRAFLSACCKHGQTQQAEVAAERLFQLER-HSGAYVLLSNMYAALGK 458
Query: 430 FGDAERLRRVMDERNAFKVPGCSLV 454
DA+R+R +M + KVPGCS +
Sbjct: 459 HEDAKRVRNMMKLKGVEKVPGCSSI 483
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 79/353 (22%), Positives = 158/353 (44%), Gaps = 23/353 (6%)
Query: 95 QLHAVISKVGFQSHVYVNTALVNMYVSL--GFLKDSSKLFDEMPERNLVTWNVMITGLVK 152
Q HA + K G + +V + L+N G L + KLF + + +N MI L+
Sbjct: 23 QAHAQVLKSGLHNSNFVLSRLLNFCAESRNGSLSHAFKLFQHIQHPTICIFNTMIKALLL 82
Query: 153 WGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEIT--I 210
GE A ++F + + T + + + + L + AC S + +
Sbjct: 83 RGEFLNAIAVFSAIFRNGIHPDTYTLPYVLKASARMTNIHLGESIHACTIKLGSAVNEFV 142
Query: 211 LAVLPAIWQNGD-VKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDI 269
L ++++ D ++S + + + E +A V +I YA G + +A +LF+
Sbjct: 143 GNSLLVMYRSFDNMRSARQV--FDEMPELSAVSWTV---MIYGYANMGDVDTARELFDMA 197
Query: 270 SVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEE 329
+V+ + W ++ISG+ + KE + F MQ ++P+ +++L+AC+H G ++
Sbjct: 198 TVKDTGI--WGAMISGYVQNNCFKEGLHMFRLMQLTEVEPDEAIIVTILSACAHMGALDT 255
Query: 330 GLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEIT--DVVVWRTLL 387
G+ + + + + ++ LIDM + G L+ A+ + +E++ D V W ++
Sbjct: 256 GI-WIHRYLGRLGLPLTLRVSTGLIDMYAKCGHLDLAKY----LFNEMSQRDNVCWNAMI 310
Query: 388 GACSFHGNVEMGERVTRKILEMER-GYGGDYVLMYNILAGVGRFGDAERLRRV 439
+ G+ GE + +EME+ G D + +LA G + R+
Sbjct: 311 SGMAMDGD---GEGAIKLFMEMEKAGIKPDNITFIAVLAACSNSGMVDEGIRI 360
>gi|357516905|ref|XP_003628741.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355522763|gb|AET03217.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 758
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 161/514 (31%), Positives = 266/514 (51%), Gaps = 80/514 (15%)
Query: 9 TPNNITTQI------HSHLLTTNSLLHHSQLFNTLLHFYSLAESPQKAFLLYKQLQQIYT 62
PN ITT H+ L ++ +N + Y + +L+ +L +I
Sbjct: 47 APNFITTCSRFKRIHHARKLFDKIPQPNTATWNAMFRGYLQNGHHRDTVVLFGELNRI-- 104
Query: 63 HSHSPLPPLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNT--------- 113
+ +P + FT+ +I++C L G ++H +K GF+S+ +V T
Sbjct: 105 ---AGMP---NCFTFPMIIKSCGKLEGVREGEEVHCCATKHGFKSNSFVATSLIDMYSKK 158
Query: 114 ----------------------ALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLV 151
A++N Y+ G + +LFD PER++V W+V+I+G +
Sbjct: 159 GCVEDAYKVFGEMHERNVVVWTAIINGYILCGDVVSGRRLFDLAPERDVVMWSVLISGYI 218
Query: 152 K---------------------W----------GELEFARSLFEEMPCRNVVSWTGIIDG 180
+ W GE+E +F+EMP RNV SW G+I G
Sbjct: 219 ESKNMAAARELFDKMPNRDTMSWNAMLNGYAVNGEVEMFEKVFDEMPERNVFSWNGLIGG 278
Query: 181 YTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTA 240
Y + +E L F++M+ + P++ T++AVL A + G + + +H Y E G+
Sbjct: 279 YVKNGLFSETLESFKRMLVEGHVIPNDFTLVAVLSACSRLGALDMGKWVHVYAESIGYKG 338
Query: 241 FDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFG 300
++ V N LID YAKCG I +A +F ++RK+++SW +II+G A+HG +A+ F
Sbjct: 339 -NLFVGNVLIDMYAKCGVIENAVVVFN--CLDRKDIISWNTIINGLAIHGHAPDALGMFD 395
Query: 301 RMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRA 360
RM+ G +P+ VTF+ +L+AC+H GLV++G +F MV+ ++P I+HYGC++D+LGRA
Sbjct: 396 RMKSEGEEPDGVTFVGILSACTHMGLVKDGFLYFKSMVDHYSIVPQIEHYGCMVDLLGRA 455
Query: 361 GRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLM 420
G L+QA +P E D V+W LLGAC + NVE+ E ++++E+E ++V++
Sbjct: 456 GLLDQALNFIRKMPIE-PDAVIWAALLGACRLYKNVEIAELALQRLIELEPNNPANFVMV 514
Query: 421 YNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
NI +GR D RL+ M + K+PGCS++
Sbjct: 515 SNIYKDLGRSEDVARLKIAMRDTGFRKLPGCSVI 548
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 87/382 (22%), Positives = 150/382 (39%), Gaps = 79/382 (20%)
Query: 80 LIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERN 139
L+R+C + Q+ A I G + + +V + + + KLFD++P+ N
Sbjct: 18 LLRSCKNYERLH---QIQAQIVTHGLEHNDFVAPNFITTCSRFKRIHHARKLFDKIPQPN 74
Query: 140 LVTWNVMITGLVKWGELEFARSLF-------------------------------EEMPC 168
TWN M G ++ G LF EE+ C
Sbjct: 75 TATWNAMFRGYLQNGHHRDTVVLFGELNRIAGMPNCFTFPMIIKSCGKLEGVREGEEVHC 134
Query: 169 --------RNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQN 220
N T +ID Y++ +A +F +M E + + A++
Sbjct: 135 CATKHGFKSNSFVATSLIDMYSKKGCVEDAYKVFGEM-----HERNVVVWTAIINGYILC 189
Query: 221 GDVKSCQ----------------LIHGYGEKRGFTAF----------DIRVLNCLIDTYA 254
GDV S + LI GY E + A D N +++ YA
Sbjct: 190 GDVVSGRRLFDLAPERDVVMWSVLISGYIESKNMAAARELFDKMPNRDTMSWNAMLNGYA 249
Query: 255 KCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVG-LKPNRVT 313
G + K+F+++ +N+ SW +I G+ +G+ E +E+F RM G + PN T
Sbjct: 250 VNGEVEMFEKVFDEMP--ERNVFSWNGLIGGYVKNGLFSETLESFKRMLVEGHVIPNDFT 307
Query: 314 FLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGI 373
++VL+ACS G ++ G + E ++ LIDM + G +E A +
Sbjct: 308 LVAVLSACSRLGALDMG-KWVHVYAESIGYKGNLFVGNVLIDMYAKCGVIENA--VVVFN 364
Query: 374 PSEITDVVVWRTLLGACSFHGN 395
+ D++ W T++ + HG+
Sbjct: 365 CLDRKDIISWNTIINGLAIHGH 386
>gi|328774755|gb|AEB39777.1| pentatricopeptide repeat protein 91 [Funaria hygrometrica]
Length = 890
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 140/382 (36%), Positives = 219/382 (57%), Gaps = 5/382 (1%)
Query: 73 DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLF 132
+ T+ +++ C+ G Q+HA ISKVGF+S + TA+ NMY G + ++ ++F
Sbjct: 385 NKVTFMSILKACSVHGALEQGRQIHAEISKVGFESDRSLQTAIFNMYAKCGSIYEAEQVF 444
Query: 133 DEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALA 192
+M +N+V W ++T +K G+L A +F EM RNVVSW +I GY + +
Sbjct: 445 SKMENKNVVAWASLLTMYIKCGDLTSAEKVFSEMSTRNVVSWNLMIAGYAQSGDIAKVFE 504
Query: 193 LFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDT 252
L M E +P +TI+++L A ++ +L+H K G + D V LI
Sbjct: 505 LLSSM-KVEGFQPDRVTIISILEACGALSALERGKLVHAEAVKLGLES-DTVVATSLIGM 562
Query: 253 YAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRV 312
Y+KCG + A +F+ IS ++ V+W ++++G+ HG+G EAV+ F RM K + PN +
Sbjct: 563 YSKCGEVTEARTVFDKIS--NRDTVAWNAMLAGYGQHGIGPEAVDLFKRMLKERVPPNEI 620
Query: 313 TFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALG 372
TF +V++AC GLV+EG F M E+ + P +HYGC++D+LGRAGRL++AE+
Sbjct: 621 TFTAVISACGRAGLVQEGREIFRIMQEDFRMKPGKQHYGCMVDLLGRAGRLQEAEEFIQR 680
Query: 373 IPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGD 432
+P E D+ VW LLGAC H NV++ E IL +E YV + NI A GR+ D
Sbjct: 681 MPCE-PDISVWHALLGACKSHDNVQLAEWAAHHILRLEPSNASVYVTLSNIYAQAGRWDD 739
Query: 433 AERLRRVMDERNAFKVPGCSLV 454
+ ++R+VMD++ K G S +
Sbjct: 740 STKVRKVMDDKGLKKDRGESSI 761
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 102/409 (24%), Positives = 195/409 (47%), Gaps = 61/409 (14%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+++++ Y+ P KAF +++++ + + P + T+ +++ C S
Sbjct: 147 WSSMIAAYAGNNHPAKAFDTFERMKD------ANIEP--NRITFLSILKACNNYSMLEKA 198
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
++H V+ G ++ V V TAL+ MY G + + ++F +M ERN+V+W
Sbjct: 199 REIHTVVKASGMETDVAVATALITMYSKCGEISLACEIFQKMKERNVVSW---------- 248
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
T II + + NEA L+ KM+ + P+ +T +++
Sbjct: 249 ---------------------TAIIQANAQHRKLNEAFELYEKMLQAGIS-PNAVTFVSL 286
Query: 214 LPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVER 273
L + + + IH + +RG D+ V N LI Y KC CI A + F+ +S +
Sbjct: 287 LNSCNTPEALNRGRRIHSHISERGLET-DVVVANALITMYCKCNCIQDARETFDRMS--K 343
Query: 274 KNLVSWTSIISGFAMHG-MGKEAVEN----FGRMQKVGLKPNRVTFLSVLNACSHGGLVE 328
++++SW+++I+G+A G KE+++ RM++ G+ PN+VTF+S+L ACS G +E
Sbjct: 344 RDVISWSAMIAGYAQSGYQDKESLDEVFQLLERMRREGVFPNKVTFMSILKACSVHGALE 403
Query: 329 EGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLG 388
+G + + + D + +M + G + +AE+ + E +VV W +LL
Sbjct: 404 QGRQIHAE-ISKVGFESDRSLQTAIFNMYAKCGSIYEAEQVFSKM--ENKNVVAWASLLT 460
Query: 389 ACSFHGNVEMGERV-----TRKILE---MERGYG--GDYVLMYNILAGV 427
G++ E+V TR ++ M GY GD ++ +L+ +
Sbjct: 461 MYIKCGDLTSAEKVFSEMSTRNVVSWNLMIAGYAQSGDIAKVFELLSSM 509
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 106/419 (25%), Positives = 183/419 (43%), Gaps = 87/419 (20%)
Query: 71 LFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSK 130
L +S TY +I CA L G +H + ++G +Y+ +L+N Y
Sbjct: 75 LVNSNTYGCIIEHCAKLRRFEDGKMVHKQLDELGLAIDIYLGNSLINFYS---------- 124
Query: 131 LFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEA 190
K+G++ +F M R+VV+W+ +I Y N +A
Sbjct: 125 ---------------------KFGDVASVEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKA 163
Query: 191 LALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLI 250
F +M EP+ IT L++L A ++ + IH + G D+ V LI
Sbjct: 164 FDTFERMKDAN-IEPNRITFLSILKACNNYSMLEKAREIHTVVKASGMET-DVAVATALI 221
Query: 251 DTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPN 310
Y+KCG I A ++F+ + + +N+VSWT+II A H EA E + +M + G+ PN
Sbjct: 222 TMYSKCGEISLACEIFQKM--KERNVVSWTAIIQANAQHRKLNEAFELYEKMLQAGISPN 279
Query: 311 RVTFLSVLNACS-----------HGGLVEEGL-------NFFDKMVEECEVLPDIKH--- 349
VTF+S+LN+C+ H + E GL N M +C + D +
Sbjct: 280 AVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDVVVANALITMYCKCNCIQDARETFD 339
Query: 350 ---------YGCLIDMLGRAGR------------LEQAEKTALGIPSEITDVVVWRTLLG 388
+ +I ++G LE+ + + P+++T + ++L
Sbjct: 340 RMSKRDVISWSAMIAGYAQSGYQDKESLDEVFQLLERMRREGV-FPNKVT----FMSILK 394
Query: 389 ACSFHGNVEMGERVTRKILEMERGYGGDYVL---MYNILAGVGRFGDAERLRRVMDERN 444
ACS HG +E G ++ +I ++ G+ D L ++N+ A G +AE++ M+ +N
Sbjct: 395 ACSVHGALEQGRQIHAEISKV--GFESDRSLQTAIFNMYAKCGSIYEAEQVFSKMENKN 451
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 95/375 (25%), Positives = 166/375 (44%), Gaps = 68/375 (18%)
Query: 49 KAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSH 108
+AF LY+++ Q + + P ++ T+ L+ +C T N G ++H+ IS+ G ++
Sbjct: 263 EAFELYEKMLQ------AGISP--NAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETD 314
Query: 109 VYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPC 168
V V AL+ MY ++D+ + FD M +R++++W+ MI G +A+S
Sbjct: 315 VVVANALITMYCKCNCIQDARETFDRMSKRDVISWSAMIAG--------YAQS------- 359
Query: 169 RNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQL 228
GY +E L +M E P+++T +++L A +G ++ +
Sbjct: 360 -----------GYQDKESLDEVFQLLERMRR-EGVFPNKVTFMSILKACSVHGALEQGRQ 407
Query: 229 IHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDI------------------- 269
IH K GF + D + + + YAKCG I+ A ++F +
Sbjct: 408 IHAEISKVGFES-DRSLQTAIFNMYAKCGSIYEAEQVFSKMENKNVVAWASLLTMYIKCG 466
Query: 270 ---SVER-------KNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLN 319
S E+ +N+VSW +I+G+A G + E M+ G +P+RVT +S+L
Sbjct: 467 DLTSAEKVFSEMSTRNVVSWNLMIAGYAQSGDIAKVFELLSSMKVEGFQPDRVTIISILE 526
Query: 320 ACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITD 379
AC +E G + V + + D LI M + G + +A I + D
Sbjct: 527 ACGALSALERGKLVHAEAV-KLGLESDTVVATSLIGMYSKCGEVTEARTVFDKISNR--D 583
Query: 380 VVVWRTLLGACSFHG 394
V W +L HG
Sbjct: 584 TVAWNAMLAGYGQHG 598
>gi|297795617|ref|XP_002865693.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297311528|gb|EFH41952.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 640
Score = 266 bits (679), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 148/396 (37%), Positives = 239/396 (60%), Gaps = 18/396 (4%)
Query: 73 DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLF 132
+ FT+ +++ CA G Q+H + K GF +V + LV MYV G +KD+ LF
Sbjct: 120 NRFTFPSVLKACAKTGKIQQGKQIHGLALKYGFGGDEFVMSNLVRMYVICGLMKDACVLF 179
Query: 133 -DEMPERNLVT-------------WNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGII 178
+ ER +V WNVMI G ++ G+ + AR LF++M R+VVSW +I
Sbjct: 180 YKNIIEREMVMMIDRRKRDGEVVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMI 239
Query: 179 DGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGF 238
GY++ +A+ +FR+M E P+ +T+++VLPA+ + G ++ + +H Y E G
Sbjct: 240 SGYSQNGFFKDAVEVFREMKKGEDIRPNYVTLVSVLPAVSRLGSLELGEWLHLYAEDSGI 299
Query: 239 TAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVEN 298
D+ + + LID Y+KCG I A +FE + R+N+++W+++I+GFA+HG +A++
Sbjct: 300 RIDDV-LGSALIDMYSKCGIIEKAIMVFE--RLPRENVITWSAMINGFAIHGQAGDAIDC 356
Query: 299 FGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLG 358
F +M++ G++P+ V ++++L ACSH GLVEEG +F +MV + P I+HYGC++D+LG
Sbjct: 357 FCKMRQAGVRPSDVAYINLLTACSHAGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLG 416
Query: 359 RAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYV 418
R G L++AE+ L +P + D V+W+ LLGAC H NVEMG+RV +++M G YV
Sbjct: 417 RLGLLDEAEEFILNMPIKPDD-VIWKALLGACRMHRNVEMGKRVANILMDMVPHDSGAYV 475
Query: 419 LMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
+ N+ A G + + +R M E + K PGCS +
Sbjct: 476 ALSNMYASQGNWSEVSEMRLRMKEMDIRKDPGCSWI 511
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 91/330 (27%), Positives = 146/330 (44%), Gaps = 52/330 (15%)
Query: 155 ELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNE--ALALFRKMVACEYTEPSEITILA 212
+L++A +F +MP RN SW II G++ + A+ LF +M++ E+ EP+ T +
Sbjct: 67 DLDYAHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFCEMMSDEFIEPNRFTFPS 126
Query: 213 VLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVE 272
VL A + G ++ + IHG K GF D V++ L+ Y CG + A LF +E
Sbjct: 127 VLKACAKTGKIQQGKQIHGLALKYGFGG-DEFVMSNLVRMYVICGLMKDACVLFYKNIIE 185
Query: 273 R-------------------------------------------KNLVSWTSIISGFAMH 289
R +++VSW ++ISG++ +
Sbjct: 186 REMVMMIDRRKRDGEVVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSQN 245
Query: 290 GMGKEAVENFGRMQK-VGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIK 348
G K+AVE F M+K ++PN VT +SVL A S G +E G + E+ + D
Sbjct: 246 GFFKDAVEVFREMKKGEDIRPNYVTLVSVLPAVSRLGSLELG-EWLHLYAEDSGIRIDDV 304
Query: 349 HYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILE 408
LIDM + G +E+A +P E +V+ W ++ + HG + G+ +
Sbjct: 305 LGSALIDMYSKCGIIEKAIMVFERLPRE--NVITWSAMINGFAIHG--QAGDAIDCFCKM 360
Query: 409 MERGYGGDYVLMYNILAGVGRFGDAERLRR 438
+ G V N+L G E RR
Sbjct: 361 RQAGVRPSDVAYINLLTACSHAGLVEEGRR 390
>gi|115434844|ref|NP_001042180.1| Os01g0176300 [Oryza sativa Japonica Group]
gi|11034538|dbj|BAB17062.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113531711|dbj|BAF04094.1| Os01g0176300 [Oryza sativa Japonica Group]
gi|125569234|gb|EAZ10749.1| hypothetical protein OsJ_00586 [Oryza sativa Japonica Group]
Length = 665
Score = 266 bits (679), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 140/381 (36%), Positives = 225/381 (59%), Gaps = 5/381 (1%)
Query: 74 SFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFD 133
+ TY ++ C LG Q+H + + G V ALV+MY G + + LF+
Sbjct: 161 AVTYVSVLSACGKGKDLLLGMQVHKRVLESGVLPDQRVENALVDMYAECGDMDAAWVLFE 220
Query: 134 EMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALAL 193
M R++ +W +I+GLV+ G+++ AR LF+ MP R+ ++WT +IDGY ++ R +AL
Sbjct: 221 GMQMRSMASWTSVISGLVRSGQVDRARDLFDHMPERDTIAWTAMIDGYVQVGRFRDALET 280
Query: 194 FRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTY 253
FR M C+ E T+++V+ A Q G +++ + Y + G D+ V N LID Y
Sbjct: 281 FRYMQICK-VRADEFTMVSVVTACAQLGALETGEWARIYMGRLGIK-MDVFVGNALIDMY 338
Query: 254 AKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVT 313
+KCG I A +F+D+ ++ +WT+II G A++G G+EA++ F RM + P+ VT
Sbjct: 339 SKCGSIERALDVFKDM--HNRDKFTWTAIILGLAVNGRGEEAIDMFYRMLRALQTPDEVT 396
Query: 314 FLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGI 373
F+ VL AC+H GLV++G FF M E + P + HYGCLID+LGRAG+L++A T +
Sbjct: 397 FVGVLTACTHAGLVDKGREFFLSMTEAYNISPTVVHYGCLIDVLGRAGKLKEALDTIDKM 456
Query: 374 PSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDA 433
P + + +W TLL +C +GN E+GE ++LE++ Y+L+ N+ A R+ D
Sbjct: 457 PMK-PNSTIWGTLLASCRVYGNSEIGELAAERLLELDPDNSTAYILLSNMYAKSNRWKDV 515
Query: 434 ERLRRVMDERNAFKVPGCSLV 454
R+R+++ E+ K PGCS++
Sbjct: 516 RRIRQIIMEKGIKKEPGCSMI 536
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 70/300 (23%), Positives = 124/300 (41%), Gaps = 59/300 (19%)
Query: 96 LHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGE 155
+HA + K G +S+ + ++L+ MY + G + + + + TG
Sbjct: 78 IHAHVVKFGMESNAHAASSLIVMYAARGDGAAARAVLEAA---------CLATG------ 122
Query: 156 LEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLP 215
P V W +I G+ R R + F MV + +T ++VL
Sbjct: 123 --------GGAP----VMWNALISGHNRSGRFELSCCSFVDMVRAS-AMATAVTYVSVLS 169
Query: 216 AIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDI------ 269
A + D+ +H + G D RV N L+D YA+CG + +A LFE +
Sbjct: 170 ACGKGKDLLLGMQVHKRVLESGVLP-DQRVENALVDMYAECGDMDAAWVLFEGMQMRSMA 228
Query: 270 -------------SVER----------KNLVSWTSIISGFAMHGMGKEAVENFGRMQKVG 306
V+R ++ ++WT++I G+ G ++A+E F MQ
Sbjct: 229 SWTSVISGLVRSGQVDRARDLFDHMPERDTIAWTAMIDGYVQVGRFRDALETFRYMQICK 288
Query: 307 LKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQA 366
++ + T +SV+ AC+ G +E G + + + D+ LIDM + G +E+A
Sbjct: 289 VRADEFTMVSVVTACAQLGALETG-EWARIYMGRLGIKMDVFVGNALIDMYSKCGSIERA 347
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 67/156 (42%), Gaps = 4/156 (2%)
Query: 73 DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLF 132
D FT ++ CA L G + ++G + V+V AL++MY G ++ + +F
Sbjct: 292 DEFTMVSVVTACAQLGALETGEWARIYMGRLGIKMDVFVGNALIDMYSKCGSIERALDVF 351
Query: 133 DEMPERNLVTWNVMITGLVKWGELEFARSLFEEM----PCRNVVSWTGIIDGYTRMNRSN 188
+M R+ TW +I GL G E A +F M + V++ G++ T +
Sbjct: 352 KDMHNRDKFTWTAIILGLAVNGRGEEAIDMFYRMLRALQTPDEVTFVGVLTACTHAGLVD 411
Query: 189 EALALFRKMVACEYTEPSEITILAVLPAIWQNGDVK 224
+ F M P+ + ++ + + G +K
Sbjct: 412 KGREFFLSMTEAYNISPTVVHYGCLIDVLGRAGKLK 447
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 71/172 (41%), Gaps = 22/172 (12%)
Query: 277 VSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDK 336
V W ++ISG G + + +F M + VT++SVL+AC G + G+ K
Sbjct: 127 VMWNALISGHNRSGRFELSCCSFVDMVRASAMATAVTYVSVLSACGKGKDLLLGMQVH-K 185
Query: 337 MVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNV 396
V E VLPD + L+DM G ++ A G+ ++ + W +++ G V
Sbjct: 186 RVLESGVLPDQRVENALVDMYAECGDMDAAWVLFEGM--QMRSMASWTSVISGLVRSGQV 243
Query: 397 E--------MGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVM 440
+ M ER T M GY VGRF DA R M
Sbjct: 244 DRARDLFDHMPERDTIAWTAMIDGY-----------VQVGRFRDALETFRYM 284
>gi|297804050|ref|XP_002869909.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297315745|gb|EFH46168.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 595
Score = 266 bits (679), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 149/423 (35%), Positives = 246/423 (58%), Gaps = 44/423 (10%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNL 92
++NTL+ Y+ + A LY++++ + + P D+ TY FL++ ++ L
Sbjct: 87 IWNTLIRGYAEIGNSVSAVSLYREMR-----ASGFVEP--DTHTYPFLLKAVGKMADVRL 139
Query: 93 GTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVK 152
G +H+V+ + GF S +YV +L+++Y + G + + K+FD+MPE++LV WN +I G +
Sbjct: 140 GETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAE 199
Query: 153 WGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILA 212
G+ E A +L+ EM + + +P TI++
Sbjct: 200 NGKPEEALALYTEMDLKGI--------------------------------KPDGFTIVS 227
Query: 213 VLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVE 272
+L A + G + + H Y K G T ++ N L+D YA+CG + A LF+++
Sbjct: 228 LLSACAKIGALTLGKRFHVYMIKVGLTR-NLHSSNVLLDLYARCGRVEEAKTLFDEMV-- 284
Query: 273 RKNLVSWTSIISGFAMHGMGKEAVENFGRMQ-KVGLKPNRVTFLSVLNACSHGGLVEEGL 331
KN VSWTS+I G A++G+GKEA+E F M+ K GL P +TF+ +L ACSH G+V+EG
Sbjct: 285 DKNSVSWTSLIVGLAVNGLGKEAIELFKNMESKEGLLPCEITFVGILYACSHCGMVKEGF 344
Query: 332 NFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACS 391
+F +M EE ++ P I+H+GC++D+L RAG++++A + L +P + +VV+WRTLLGAC+
Sbjct: 345 EYFRRMSEEYKIEPRIEHFGCMVDLLARAGQVKKAYEYILKMPMQ-PNVVIWRTLLGACT 403
Query: 392 FHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGC 451
HG+ ++ E KIL++E + GDYVL+ N+ A R+ D +++R+ M KVPG
Sbjct: 404 VHGDSDLAELARMKILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVRKVPGH 463
Query: 452 SLV 454
SLV
Sbjct: 464 SLV 466
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/243 (32%), Positives = 130/243 (53%), Gaps = 13/243 (5%)
Query: 156 LEFARSLFE--EMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
+ +A +F E P NV W +I GY + S A++L+R+M A + EP T +
Sbjct: 69 MSYAHKVFSKIEKPI-NVFIWNTLIRGYAEIGNSVSAVSLYREMRASGFVEPDTHTYPFL 127
Query: 214 LPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVER 273
L A+ + DV+ + IH + GF + I V N L+ YA CG + SA K+F+ +
Sbjct: 128 LKAVGKMADVRLGETIHSVVIRSGFGSL-IYVQNSLLHLYANCGDVASAYKVFDKMP--E 184
Query: 274 KNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNF 333
K+LV+W S+I+GFA +G +EA+ + M G+KP+ T +S+L+AC+ G + G F
Sbjct: 185 KDLVAWNSVINGFAENGKPEEALALYTEMDLKGIKPDGFTIVSLLSACAKIGALTLGKRF 244
Query: 334 FDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITD--VVVWRTLLGACS 391
M+ + + ++ L+D+ R GR+E+A KT E+ D V W +L+ +
Sbjct: 245 HVYMI-KVGLTRNLHSSNVLLDLYARCGRVEEA-KTLF---DEMVDKNSVSWTSLIVGLA 299
Query: 392 FHG 394
+G
Sbjct: 300 VNG 302
>gi|255540655|ref|XP_002511392.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550507|gb|EEF51994.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 441
Score = 266 bits (679), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 145/397 (36%), Positives = 234/397 (58%), Gaps = 7/397 (1%)
Query: 60 IYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMY 119
++ H + L D + + ++++C+ + P LGT +HA I K+GF S+ +V +ALV+MY
Sbjct: 49 LFYHMQTSLALSLDPYVFPLVLKSCSAVLCPQLGTSVHAHIVKMGFLSNPFVASALVDMY 108
Query: 120 VSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCR-NVVSWTGII 178
+ + KLFDE+P+RN+V WN MI+ + A +F+ M NV ++ +I
Sbjct: 109 GKCACIFSARKLFDEIPQRNVVVWNAMISLYTHSNRVRDALDMFDAMEIEPNVSTFNALI 168
Query: 179 DGYTRM-NRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRG 237
G + + + S +A+A + KM +P+ IT+LA+LPA + + IHGY +
Sbjct: 169 YGLSGVKDGSIKAIAFYWKMRQLG-LKPNLITLLALLPACVGIAALNLIREIHGYSIRND 227
Query: 238 FTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVE 297
++ + L+D Y +CGC+ +AS +F ++ +++V+W+S+IS +A+HG K A+E
Sbjct: 228 IDRHP-QLGSGLLDAYGRCGCLINASNVF--CGMKERDVVAWSSLISAYALHGEAKNALE 284
Query: 298 NFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDML 357
F +M+ ++P+ +TFL+VL ACSH GL +E L++F KM E + HY CL+D+L
Sbjct: 285 IFRQMELAKVQPDDITFLAVLKACSHAGLADEALDYFTKMQEGYRLQAVSDHYSCLVDVL 344
Query: 358 GRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDY 417
RAGRL +A K +P ++T W LLGAC +G +E+ E V R + E+E +Y
Sbjct: 345 SRAGRLYEAYKVIQEMPVKVT-AKAWGALLGACRTYGEIELAEIVGRALFEIEPDNPANY 403
Query: 418 VLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
VL+ I A VGR+ +A+R+RR M ER PG S V
Sbjct: 404 VLLARIYASVGRYDEAQRIRREMKERGVKVSPGSSWV 440
>gi|326519957|dbj|BAK03903.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 598
Score = 266 bits (679), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 152/447 (34%), Positives = 243/447 (54%), Gaps = 22/447 (4%)
Query: 15 TQIHSHLLTTNSLLHHSQLFNTLLHFYSLAESPQKAFLLYKQLQQ--IYTHSHSPLPPLF 72
+I + L+T+ L ++L + L+ ++ + PQ A LY L + ++ H+ LP L
Sbjct: 37 ARIQAALVTSGLLRRSAELHDALIRAHASSGRPQAALPLYAHLIRAGLFPTPHT-LPSLL 95
Query: 73 DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSL-GFLKDSSKL 131
S S + L+ L HAV ++G + VN AL+ ++ L G L D+ L
Sbjct: 96 KSLALSPAVPGARRLA---LAVHAHAV--RLGLAGFLLVNNALIRVHAGLLGRLADAHLL 150
Query: 132 FDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEAL 191
+ T+N +IT + G + ARSLF+EMP RN VSW+ +++GY + EAL
Sbjct: 151 LRTSAAVDASTFNTLITAHARAGRVADARSLFDEMPERNAVSWSAMVNGYVQAGDGREAL 210
Query: 192 ALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVL----N 247
+F +M A + P + ++ VL A Q G ++ + +HGY A +IR+
Sbjct: 211 GVFSQMQA-QGVRPDDTVLVGVLAACAQLGALEQGKWVHGY-----LKANNIRMTVFLGT 264
Query: 248 CLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGL 307
L+D YAKCG + ++FE ++ KN+++WT++I G AMHG G +++ F +M+ G+
Sbjct: 265 ALVDMYAKCGEVQLGMEVFE--GMKDKNVLAWTTMIKGLAMHGRGSDSLTLFSQMESSGV 322
Query: 308 KPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAE 367
KP+ + F+ L AC+H GLV++G F+ MV + P I+HYGC++D+L R G L +A
Sbjct: 323 KPDDIAFIGALCACTHTGLVDKGRELFNSMVNNYGIKPKIEHYGCMVDLLARNGLLSEAR 382
Query: 368 KTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGV 427
+P + D ++W L+ C FH NVE+ E V + +E+E G YVL+ NI +
Sbjct: 383 DMVEKMPMK-PDALIWGALMAGCRFHKNVELAEYVIKHWIELEPDKSGAYVLLGNIYSAS 441
Query: 428 GRFGDAERLRRVMDERNAFKVPGCSLV 454
GR A +R +M E+ K PGCS V
Sbjct: 442 GRHASAREIRNLMREKGVEKTPGCSNV 468
>gi|225451356|ref|XP_002275085.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04750,
mitochondrial-like [Vitis vinifera]
Length = 654
Score = 266 bits (679), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 160/479 (33%), Positives = 255/479 (53%), Gaps = 33/479 (6%)
Query: 1 MHILQNSQTPNNITTQIHSHLLTTNSLLHHSQLFNTLLHFYSLAESPQKAFLLYKQLQQ- 59
+ +LQ S+ + + QIH H + T S ++ L NTL+ Y E A+ +++Q+
Sbjct: 134 LFLLQASKFLSQVM-QIHCHAIITGSF-YYGYLQNTLMKIYLENEKMGLAYQVFQQMAAP 191
Query: 60 ----------------------IYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLGTQLH 97
+ H L D FT L+ C L LG +H
Sbjct: 192 DAVSFNIMIFGYAKKGHNIEALKFLHEMVGLGLKPDEFTMLGLLICCGRLGDAQLGKSVH 251
Query: 98 AVISKVGF--QSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGE 155
A I + G S++ +N AL++MYV L+ + +F+ + ++ ++WN MI G K G
Sbjct: 252 AWIERRGLIKSSNLILNNALLDMYVKCKELRIAQSIFNVIVRKDTISWNTMIAGYAKVGN 311
Query: 156 LEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLP 215
LE A + FE+MPCR++VSW II GY + LF MVA E P +TI+ ++
Sbjct: 312 LEIAHNFFEDMPCRDLVSWNSIIAGYAQKGDCLMVQRLFENMVA-ENIWPDFVTIINLVS 370
Query: 216 AIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKN 275
A + G + + IHG+ R D + + ID Y KCG I A +F +++ K+
Sbjct: 371 AAAEIGALHHGRWIHGW-VVRMQMKIDAFLGSAFIDMYWKCGSIKRACMVFREVT--EKD 427
Query: 276 LVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFD 335
+ WT++I+GFA HG G +A++ F MQ+ + PN+VTF++VL ACSH G V +GL F+
Sbjct: 428 VTVWTTMITGFAFHGYGSKALQLFYEMQEY-VMPNQVTFVAVLTACSHSGFVSQGLRIFN 486
Query: 336 KMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGN 395
M E + P ++HYGCL+D+LGR+GR + + +P + + +W +L AC +GN
Sbjct: 487 SMKERYGIEPGVEHYGCLVDLLGRSGRFSEVKDVIEMMPMKPSR-SIWGAVLSACRAYGN 545
Query: 396 VEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
+E+ E +++L++E G YVL+ NI A GR+ ++++R +M+ R K GCS V
Sbjct: 546 IEIAEIAGKELLKLEPEKEGGYVLLSNIYATSGRWKHSDKIREIMESRGVKKTAGCSSV 604
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 103/420 (24%), Positives = 172/420 (40%), Gaps = 74/420 (17%)
Query: 89 HPNLGTQLHAVISKVGF---QSHVYVNTALVNMYV----SLGFLKDSSKLFDEMPERNLV 141
HPNL + +IS + QS + N+ L + + FL +SK ++ + +
Sbjct: 94 HPNLYI-YNTMISALSLSLNQSFAFYNSLLSSCIYPNRSTFLFLLQASKFLSQVMQ---I 149
Query: 142 TWNVMITGLVKWGELE--------------FARSLFEEMPCRNVVSWTGIIDGYTRMNRS 187
+ +ITG +G L+ A +F++M + VS+ +I GY + +
Sbjct: 150 HCHAIITGSFYYGYLQNTLMKIYLENEKMGLAYQVFQQMAAPDAVSFNIMIFGYAKKGHN 209
Query: 188 NEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVL- 246
EAL +MV +P E T+L +L + GD + + +H + E+RG +L
Sbjct: 210 IEALKFLHEMVGLG-LKPDEFTMLGLLICCGRLGDAQLGKSVHAWIERRGLIKSSNLILN 268
Query: 247 NCLIDTYAKC-------------------------------GCIFSASKLFEDISVERKN 275
N L+D Y KC G + A FED+ ++
Sbjct: 269 NALLDMYVKCKELRIAQSIFNVIVRKDTISWNTMIAGYAKVGNLEIAHNFFEDMPC--RD 326
Query: 276 LVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFD 335
LVSW SII+G+A G F M + P+ VT +++++A + G + G +
Sbjct: 327 LVSWNSIIAGYAQKGDCLMVQRLFENMVAENIWPDFVTIINLVSAAAEIGALHHG-RWIH 385
Query: 336 KMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEIT--DVVVWRTLLGACSFH 393
V ++ D IDM + G + K A + E+T DV VW T++ +FH
Sbjct: 386 GWVVRMQMKIDAFLGSAFIDMYWKCGSI----KRACMVFREVTEKDVTVWTTMITGFAFH 441
Query: 394 GNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRV---MDERNAFKVPG 450
G G + + EM+ + V +L G + R+ M ER + PG
Sbjct: 442 G---YGSKALQLFYEMQEYVMPNQVTFVAVLTACSHSGFVSQGLRIFNSMKERYGIE-PG 497
>gi|357167109|ref|XP_003581008.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Brachypodium distachyon]
Length = 921
Score = 266 bits (679), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 138/370 (37%), Positives = 215/370 (58%), Gaps = 6/370 (1%)
Query: 83 TCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVT 142
C+ + G Q+H++ K G Q + YV AL++MY ++ ++F+ M ++ V+
Sbjct: 427 ACSHIGALETGRQVHSLAVKAGCQFNSYVCNALISMYGKCRNMEYVRQVFNRMRVKDTVS 486
Query: 143 WNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEY 202
WN I LV+ LE AR +F+ M R+VVSWT II Y + R +EA+ F+ M+ E+
Sbjct: 487 WNSFIAALVQNNMLEDARHIFDNMLSRDVVSWTTIISAYAQAERGDEAVEFFKTMLH-EH 545
Query: 203 TEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSA 262
+P+ + +L G K Q IH K G + ++ V N L+ Y KCGC +
Sbjct: 546 EKPNSPILTILLSVCGGLGSAKLGQQIHTVAIKHGMDS-ELIVANALMSMYFKCGCA-DS 603
Query: 263 SKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACS 322
K+F+ S+E +++ +W + I+G A HG+G+EA++ + M+ VG+ PN VTF+ +LNACS
Sbjct: 604 HKVFD--SMEERDIFTWNTFITGCAQHGLGREAIKMYEHMESVGVLPNEVTFVGLLNACS 661
Query: 323 HGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVV 382
H GLV+EG FF M + + P ++HY C++D+LGR G ++ AEK +P E D V+
Sbjct: 662 HAGLVDEGWQFFKSMSRDYGLTPLLEHYACMVDLLGRTGDVQGAEKFIYDMPIE-PDTVI 720
Query: 383 WRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDE 442
W LLGAC H N E+G R K+ E G+YV++ NI + +G + + LR++M +
Sbjct: 721 WSALLGACKIHKNAEIGRRAAEKLFTTEPSNAGNYVMLSNIYSSLGMWVEVAELRKIMKQ 780
Query: 443 RNAFKVPGCS 452
R K PGCS
Sbjct: 781 RGVSKEPGCS 790
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 124/459 (27%), Positives = 190/459 (41%), Gaps = 99/459 (21%)
Query: 60 IYTHSHSPLP---PLFD------SFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQ--SH 108
+YT S L FD +T+S +I A LSH G ++ A I+ G
Sbjct: 267 VYTRDASALDIAIKFFDGMVERNEYTWSTMI---AALSH---GGRIDAAIAVYGRDPVKS 320
Query: 109 VYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPC 168
+ TAL+ G + ++ LF+++P+ +V+WN MITG ++ G ++ A+ LF+ MP
Sbjct: 321 IPSQTALLTGLARCGRITEARILFEQIPDPIVVSWNAMITGYMQNGMVDEAKELFDRMPF 380
Query: 169 RNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQL 228
RN +SW G+I GY + RS EAL L + + PS ++ + A G +++ +
Sbjct: 381 RNTISWAGMIAGYAQNGRSEEALDLLQALHR-NGMLPSLSSLTSSFLACSHIGALETGRQ 439
Query: 229 IHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVE---------------- 272
+H K G F+ V N LI Y KC + ++F + V+
Sbjct: 440 VHSLAVKAG-CQFNSYVCNALISMYGKCRNMEYVRQVFNRMRVKDTVSWNSFIAALVQNN 498
Query: 273 -------------RKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLN 319
+++VSWT+IIS +A G EAVE F M KPN +L+
Sbjct: 499 MLEDARHIFDNMLSRDVVSWTTIISAYAQAERGDEAVEFFKTMLHEHEKPNSPILTILLS 558
Query: 320 ACSHGGL-------------VEEGLN-----------------------FFDKMVEECEV 343
C GGL ++ G++ FD M E
Sbjct: 559 VC--GGLGSAKLGQQIHTVAIKHGMDSELIVANALMSMYFKCGCADSHKVFDSMEERDIF 616
Query: 344 LPDIKHYGCLIDMLGRAGRLEQAEKTALGI-PSEITDVVVWRTLLGACSFHGNVEMGERV 402
+ GC LGR ++G+ P+E+T V LL ACS G V+ G +
Sbjct: 617 TWNTFITGCAQHGLGREAIKMYEHMESVGVLPNEVTFV----GLLNACSHAGLVDEGWQF 672
Query: 403 TRKILEMERGYG-----GDYVLMYNILAGVGRFGDAERL 436
+ M R YG Y M ++L G AE+
Sbjct: 673 FKS---MSRDYGLTPLLEHYACMVDLLGRTGDVQGAEKF 708
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 141/284 (49%), Gaps = 14/284 (4%)
Query: 114 ALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVS 173
A+V+ YV G + + +LFD MP R++ +WN M+TG ++ A +LF++MP RN+V+
Sbjct: 131 AMVSCYVQNGDITMARRLFDAMPSRDVTSWNSMVTGYCHSRQMVDAWNLFKQMPQRNLVT 190
Query: 174 WTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYG 233
WT +I GY R+ + + +FR M+ E P + +VL A+ D+ +++
Sbjct: 191 WTVMISGYVRIEQHGKGWDIFR-MMHHEGASPDQSNFASVLSAVTGLQDLGVLEVLRPLV 249
Query: 234 EKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGK 293
K GF + D+ + +++ Y + + F D VER N +W+++I+ + G
Sbjct: 250 LKTGFES-DVVIGTSILNVYTRDASALDIAIKFFDGMVER-NEYTWSTMIAALSHGGRID 307
Query: 294 EAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCL 353
A+ +GR V P++ L+ L C G + E F+++ + P + + +
Sbjct: 308 AAIAVYGR-DPVKSIPSQTALLTGLARC---GRITEARILFEQIPD-----PIVVSWNAM 358
Query: 354 IDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVE 397
I + G +++A++ +P + + W ++ + +G E
Sbjct: 359 ITGYMQNGMVDEAKELFDRMP--FRNTISWAGMIAGYAQNGRSE 400
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 140/297 (47%), Gaps = 34/297 (11%)
Query: 111 VNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRN 170
++A + LG L+++ ++FD MP R+++ WN MI+ G LE AR LF+ + N
Sbjct: 35 AHSARIRELARLGRLREAREVFDAMPHRDIIAWNSMISAYCNSGMLEDARILFDAISGGN 94
Query: 171 VVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIH 230
V + T ++ GY R+ R +A +F M E + + A++ QNGD+ + +
Sbjct: 95 VRTATILLSGYARLGRVLDARRVFDGM-----PERNTVAWNAMVSCYVQNGDITMARRLF 149
Query: 231 GYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFA--- 287
R T++ N ++ Y + A LF+ + ++NLV+WT +ISG+
Sbjct: 150 DAMPSRDVTSW-----NSMVTGYCHSRQMVDAWNLFKQMP--QRNLVTWTVMISGYVRIE 202
Query: 288 MHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEG-LNFFDKMVEECEVLPD 346
HG G + F M G P++ F SVL+A + GL + G L +V + D
Sbjct: 203 QHGKGWDI---FRMMHHEGASPDQSNFASVLSAVT--GLQDLGVLEVLRPLVLKTGFESD 257
Query: 347 IKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVV------WRTLLGACSFHGNVE 397
+ ++++ R + +AL I + D +V W T++ A S G ++
Sbjct: 258 VVIGTSILNVYTR-------DASALDIAIKFFDGMVERNEYTWSTMIAALSHGGRID 307
>gi|297733959|emb|CBI15206.3| unnamed protein product [Vitis vinifera]
Length = 416
Score = 266 bits (679), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 159/424 (37%), Positives = 231/424 (54%), Gaps = 46/424 (10%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNL 92
L+NT++ P+KAF YK++Q + D+FTYSFL++ C L L
Sbjct: 18 LWNTMIRGLGRTRQPEKAFEFYKRMQ--------VKGEVLDNFTYSFLVKVCGQLGSDLL 69
Query: 93 GTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVK 152
G Q+H + K G + HV+V LV+MY G KD
Sbjct: 70 GKQIHCNVLKHGLEEHVFVRNTLVHMY---GMFKD------------------------- 101
Query: 153 WGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILA 212
+E A LFEEMP +V+W IID R EA+ LF +M+ +P + T +
Sbjct: 102 ---IEAATHLFEEMPKSYLVAWNTIIDCNVYCGRYKEAIELFFRMLQSG-LKPDDATFVV 157
Query: 213 VLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVE 272
L A G++ + +H + G + V N LID YAKCG + +A ++F + +
Sbjct: 158 TLSACAALGELDIGRRVHSCIDHTGLGNV-VSVSNSLIDMYAKCGVVEAAYEIFNKM--K 214
Query: 273 RKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLK-PNRVTFLSVLNACSHGGLVEEGL 331
+N+VSW ++I G AMHG G EA+E F +M + L PN VTFL VL ACSHGG+VEEG
Sbjct: 215 GRNIVSWNTMILGLAMHGHGDEALELFSKMLEEKLATPNEVTFLGVLCACSHGGMVEEGR 274
Query: 332 NFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACS 391
+FD M + + P IKHYG ++D+LGRAG +E+A + +P E ++ +VWRTLL AC
Sbjct: 275 RYFDIMRRDYNIQPTIKHYGSMVDILGRAGLVEEAYRLIKSMPIE-SNSIVWRTLLAACR 333
Query: 392 FHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFK-VPG 450
HGN+E+ E+V +++LE+E + DYVL+ N+ A G++ R+R+ M R K PG
Sbjct: 334 VHGNLELAEQVRQQLLELEPDHSSDYVLLANMYASAGQWNKVVRVRKSMHIRGVQKPKPG 393
Query: 451 CSLV 454
S +
Sbjct: 394 NSYI 397
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 138/318 (43%), Gaps = 58/318 (18%)
Query: 16 QIHSHLLTTNSLLHHSQLFNTLLHFYSLAESPQKAFLLYKQLQQ-------------IYT 62
QIH ++L + L H + NTL+H Y + + + A L++++ + +Y
Sbjct: 72 QIHCNVLK-HGLEEHVFVRNTLVHMYGMFKDIEAATHLFEEMPKSYLVAWNTIIDCNVYC 130
Query: 63 HSHSPLPPLF----------DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVN 112
+ LF D T+ + CA L ++G ++H+ I G + V V+
Sbjct: 131 GRYKEAIELFFRMLQSGLKPDDATFVVTLSACAALGELDIGRRVHSCIDHTGLGNVVSVS 190
Query: 113 TALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVV 172
+L++MY G ++ + ++F++M RN+V+WN MI GL G
Sbjct: 191 NSLIDMYAKCGVVEAAYEIFNKMKGRNIVSWNTMILGLAMHGH----------------- 233
Query: 173 SWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGY 232
+EAL LF KM+ + P+E+T L VL A G V+ +
Sbjct: 234 --------------GDEALELFSKMLEEKLATPNEVTFLGVLCACSHGGMVEEGRRYFDI 279
Query: 233 GEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMG 292
+ I+ ++D + G + A +L + + +E ++V W ++++ +HG
Sbjct: 280 MRRDYNIQPTIKHYGSMVDILGRAGLVEEAYRLIKSMPIESNSIV-WRTLLAACRVHG-N 337
Query: 293 KEAVENFGRMQKVGLKPN 310
E E R Q + L+P+
Sbjct: 338 LELAEQV-RQQLLELEPD 354
>gi|359473281|ref|XP_003631282.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g40405-like [Vitis vinifera]
Length = 615
Score = 265 bits (678), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 154/452 (34%), Positives = 250/452 (55%), Gaps = 24/452 (5%)
Query: 8 QTPNNITTQIHSHLLTTNSLLHHSQ-----LFNTLLHFYSLAESPQKAFLLYKQLQQIYT 62
PNN L +N +L +SQ FN+++ +S + +P ++F Y ++
Sbjct: 54 NNPNN--------LHYSNQVLDNSQNPTLFTFNSMIRAHSKSSTPHRSFHFYSRI----L 101
Query: 63 HSHSPLPPLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSL 122
HS L P D++T++FL+RT A L G+ +H K GF+ +V + L+ MY L
Sbjct: 102 HSAGYLAP--DNYTFTFLVRTSAQLLAHGTGSSVHGAAVKYGFEYDPHVQSGLIYMYAEL 159
Query: 123 GFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYT 182
G L ++F + E +LV M++ K G++ FAR LF++M ++ ++W +I GY
Sbjct: 160 GGLDACHRVFSSICEPDLVCQTAMVSACAKMGDVGFARKLFDKMSHKDPIAWNAMISGYV 219
Query: 183 RMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFD 242
+ +S EAL+LF M E + +E+++++VL A G + + H Y E+
Sbjct: 220 QCGQSREALSLFNLMQR-EGVKVNEVSMVSVLSACSHLGALDQGRWAHAYIERNKLR-MT 277
Query: 243 IRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRM 302
+ + LID YAKCG + A ++F ++ KN+ +W+S I G AM+G G++ +E F M
Sbjct: 278 LTLGTALIDMYAKCGNMNKAMEVF--WGMKEKNVYTWSSAIGGLAMNGAGEKCLELFSLM 335
Query: 303 QKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGR 362
++ ++PN +TF+SVL CS GLVEEG F+ M + + P ++HYGC++D+ GRAG
Sbjct: 336 KQDSVQPNEITFVSVLRGCSVVGLVEEGRKHFESMSKVYGIEPRLEHYGCMVDLYGRAGH 395
Query: 363 LEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYN 422
L++A +P V W LL AC + N+EMGE +RKI+E+E G YVL+ N
Sbjct: 396 LDEALNFINSMPVR-PHVGAWGALLNACKIYRNMEMGELASRKIVELEAKNHGAYVLLSN 454
Query: 423 ILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
I A + +R+ M+ + K PGCS++
Sbjct: 455 IYADSKDWDRVSNVRQTMNVKGVRKQPGCSVI 486
>gi|79329389|ref|NP_001031987.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171830|sp|Q9FND7.1|PP410_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g40405
gi|10178152|dbj|BAB11597.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332007161|gb|AED94544.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 612
Score = 265 bits (678), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 152/442 (34%), Positives = 246/442 (55%), Gaps = 16/442 (3%)
Query: 18 HSHLLTTNSLLHHSQ---LF--NTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLF 72
H +L N +L S+ LF N+++ + + P+K+F Y+++ S + L P
Sbjct: 53 HKYLDYANQILDRSEKPTLFALNSMIRAHCKSPVPEKSFDFYRRI----LSSGNDLKP-- 106
Query: 73 DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLF 132
D++T +FL++ C L G Q+H + + GF + +V T L+++Y LG L K+F
Sbjct: 107 DNYTVNFLVQACTGLRMRETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVF 166
Query: 133 DEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALA 192
+ +P + V M+T + G++ FAR LFE MP R+ ++W +I GY ++ S EAL
Sbjct: 167 NSIPCPDFVCRTAMVTACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALN 226
Query: 193 LFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDT 252
+F M E + + + +++VL A Q G + + H Y E R +R+ L+D
Sbjct: 227 VFHLM-QLEGVKVNGVAMISVLSACTQLGALDQGRWAHSYIE-RNKIKITVRLATTLVDL 284
Query: 253 YAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRV 312
YAKCG + A ++F +E KN+ +W+S ++G AM+G G++ +E F M++ G+ PN V
Sbjct: 285 YAKCGDMEKAMEVF--WGMEEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAV 342
Query: 313 TFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALG 372
TF+SVL CS G V+EG FD M E + P ++HYGCL+D+ RAGRLE A
Sbjct: 343 TFVSVLRGCSVVGFVDEGQRHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQ 402
Query: 373 IPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGD 432
+P + VW +LL A + N+E+G ++K+LE+E G YVL+ NI A + +
Sbjct: 403 MPMK-PHAAVWSSLLHASRMYKNLELGVLASKKMLELETANHGAYVLLSNIYADSNDWDN 461
Query: 433 AERLRRVMDERNAFKVPGCSLV 454
+R+ M + K PGCS++
Sbjct: 462 VSHVRQSMKSKGVRKQPGCSVM 483
>gi|357146098|ref|XP_003573875.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Brachypodium distachyon]
Length = 652
Score = 265 bits (677), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 145/421 (34%), Positives = 240/421 (57%), Gaps = 12/421 (2%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+NTL+ Y P++A ++ ++ + + +P D T ++ A L LG
Sbjct: 189 WNTLIGGYVRRGVPREALEMFWRM--VGDGAVTP-----DEVTMIGVVSGSAQLRDLELG 241
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
+LH + G + V + +++MY+ G L+ + +F+ + ++ +V+W MI G ++
Sbjct: 242 RRLHGYVESHGVRCTVRLMNVVMDMYIKCGDLERAKSVFEGIDKKTIVSWTTMIVGYAQF 301
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
G ++ AR +F+EMP R+V W ++ GY + R EAL LF M EP +IT++ +
Sbjct: 302 GLMDDARKVFDEMPERDVFPWNALMTGYVQCKRGKEALRLFHDMQEA-MVEPDDITMVNL 360
Query: 214 LPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVER 273
L A Q G ++ +H Y ++R + + + L+D Y+KCG I A ++F++I
Sbjct: 361 LSACSQLGALEMGMWVHHYIDRRRVS-LSVMLGTNLVDMYSKCGNIEKAIRVFKEIP--E 417
Query: 274 KNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNF 333
KN ++WT++ISG A HG A++ F RM ++GL+P+ +TF+ VL+AC H GLV+EG F
Sbjct: 418 KNALTWTAMISGLANHGHADVAIKYFQRMIELGLQPDEITFIGVLSACCHAGLVKEGQEF 477
Query: 334 FDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFH 393
F MV + + +KHY C++D+LGRAG L++AE +P E D VVW L AC H
Sbjct: 478 FSLMVSKYHLERKMKHYSCMVDLLGRAGYLDEAEHLVNTMPME-PDAVVWGALFFACRMH 536
Query: 394 GNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSL 453
GN+ +GE+ K++E++ G G YVL+ N+ A A+++R +M KVPGCS
Sbjct: 537 GNITLGEKAAMKLVELDPGDSGIYVLLANMYAEANMRKKADKVRVMMRHLGVEKVPGCSC 596
Query: 454 V 454
+
Sbjct: 597 I 597
Score = 137 bits (346), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 98/393 (24%), Positives = 177/393 (45%), Gaps = 76/393 (19%)
Query: 73 DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLF 132
D T+ FL++ CA L N G + + +GF + V+V A ++ + ++ KLF
Sbjct: 119 DHLTFPFLLKACARLQERNYGNAVLGNVLSLGFHADVFVVNAAMHFLAVCSSMAEARKLF 178
Query: 133 DEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALA 192
D R+LV+WN + I GY R EAL
Sbjct: 179 DGSHVRDLVSWNTL-------------------------------IGGYVRRGVPREALE 207
Query: 193 LFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDT 252
+F +MV P E+T++ V+ Q D++ + +HGY E G +R++N ++D
Sbjct: 208 MFWRMVGDGAVTPDEVTMIGVVSGSAQLRDLELGRRLHGYVESHGVRC-TVRLMNVVMDM 266
Query: 253 YAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGM--------------------- 291
Y KCG + A +FE I ++K +VSWT++I G+A G+
Sbjct: 267 YIKCGDLERAKSVFEGI--DKKTIVSWTTMIVGYAQFGLMDDARKVFDEMPERDVFPWNA 324
Query: 292 ----------GKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGL---NFFDKMV 338
GKEA+ F MQ+ ++P+ +T +++L+ACS G +E G+ ++ D+
Sbjct: 325 LMTGYVQCKRGKEALRLFHDMQEAMVEPDDITMVNLLSACSQLGALEMGMWVHHYIDRRR 384
Query: 339 EECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEM 398
V+ L+DM + G +E+A + IP + + + W ++ + HG+ ++
Sbjct: 385 VSLSVMLGTN----LVDMYSKCGNIEKAIRVFKEIPEK--NALTWTAMISGLANHGHADV 438
Query: 399 GERVTRKILEMERGYGGDYVLMYNILAGVGRFG 431
+ ++++E+ G D + +L+ G
Sbjct: 439 AIKYFQRMIEL--GLQPDEITFIGVLSACCHAG 469
>gi|147810456|emb|CAN69807.1| hypothetical protein VITISV_019655 [Vitis vinifera]
Length = 516
Score = 265 bits (677), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 159/424 (37%), Positives = 230/424 (54%), Gaps = 46/424 (10%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNL 92
L+NT++ P+KAF YK++Q + D+FTYSFL++ C L L
Sbjct: 118 LWNTMIRGLGRTRQPEKAFEFYKRMQ--------VKGEVLDNFTYSFLVKVCGQLGSDLL 169
Query: 93 GTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVK 152
G Q+H + K G + HV+V LV+MY G KD
Sbjct: 170 GKQIHCNVLKHGLEEHVFVRNTLVHMY---GMFKD------------------------- 201
Query: 153 WGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILA 212
+E A LFEEMP +V+W IID R EA+ LF +M+ +P + T +
Sbjct: 202 ---IEAATHLFEEMPKSYLVAWNTIIDCNVYCGRYKEAIELFFRMLQ-SGLKPDDATFVV 257
Query: 213 VLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVE 272
L A G++ + +H + G + V N LID YAKCG + +A ++F + +
Sbjct: 258 TLSACAALGELDIGRRVHSCIDHTGLGNV-VSVSNSLIDMYAKCGVVEAAYEIFNKM--K 314
Query: 273 RKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLK-PNRVTFLSVLNACSHGGLVEEGL 331
+N+VSW ++I G AMHG G EA+E F +M + L PN VTFL VL ACSHGG+VEEG
Sbjct: 315 GRNIVSWNTMILGLAMHGHGDEALELFSKMLEEKLATPNEVTFLGVLCACSHGGMVEEGR 374
Query: 332 NFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACS 391
+FD M + + P IKHYG ++D+LGRAG +E+A + +P E ++ +VWRTLL AC
Sbjct: 375 RYFDIMRRDYNIQPTIKHYGSMVDILGRAGLVEEAYRLIKSMPIE-SNSIVWRTLLAACR 433
Query: 392 FHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFK-VPG 450
HGN+E+ E+V + +LE+E + DYVL+ N+ A G++ R+R+ M R K PG
Sbjct: 434 VHGNLELAEQVRQXLLELEPDHSSDYVLLANMYASAGQWNKVXRVRKSMHIRGVQKPKPG 493
Query: 451 CSLV 454
S +
Sbjct: 494 NSYI 497
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/298 (23%), Positives = 129/298 (43%), Gaps = 56/298 (18%)
Query: 16 QIHSHLLTTNSLLHHSQLFNTLLHFYSLAESPQKAFLLYKQLQQ-------------IYT 62
QIH ++L + L H + NTL+H Y + + + A L++++ + +Y
Sbjct: 172 QIHCNVLK-HGLEEHVFVRNTLVHMYGMFKDIEAATHLFEEMPKSYLVAWNTIIDCNVYC 230
Query: 63 HSHSPLPPLF----------DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVN 112
+ LF D T+ + CA L ++G ++H+ I G + V V+
Sbjct: 231 GRYKEAIELFFRMLQSGLKPDDATFVVTLSACAALGELDIGRRVHSCIDHTGLGNVVSVS 290
Query: 113 TALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVV 172
+L++MY G ++ + ++F++M RN+V+WN MI GL G
Sbjct: 291 NSLIDMYAKCGVVEAAYEIFNKMKGRNIVSWNTMILGLAMHG------------------ 332
Query: 173 SWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGY 232
+EAL LF KM+ + P+E+T L VL A G V+ +
Sbjct: 333 -------------HGDEALELFSKMLEEKLATPNEVTFLGVLCACSHGGMVEEGRRYFDI 379
Query: 233 GEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHG 290
+ I+ ++D + G + A +L + + +E ++V W ++++ +HG
Sbjct: 380 MRRDYNIQPTIKHYGSMVDILGRAGLVEEAYRLIKSMPIESNSIV-WRTLLAACRVHG 436
>gi|357487459|ref|XP_003614017.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355515352|gb|AES96975.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 525
Score = 265 bits (677), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 144/426 (33%), Positives = 236/426 (55%), Gaps = 15/426 (3%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNL 92
++NTL+ + + + A ++ ++ Q S L P D++T ++++ C T +
Sbjct: 74 IYNTLIKAFLVNNKFKSALQVFVKMLQ------SELKP--DNYTIPYVLKACGTFHDCSF 125
Query: 93 GTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVK 152
G +H SK+G +YV +L+ MY G + + +FDE+P N+V+W+VMI+G K
Sbjct: 126 GKMIHGYSSKLGLVFDIYVGNSLMAMYCVFGDVVAARYVFDEIPSLNVVSWSVMISGYAK 185
Query: 153 WGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILA 212
G+++ AR F+E P ++ W +I GY + + E+L LFR M + P E ++
Sbjct: 186 VGDVDSARLFFDEAPEKDKGIWGAMISGYVQNSCFKESLYLFRLMQLTDIV-PDESIFVS 244
Query: 213 VLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVE 272
+L A G ++ IH + + +R+ L+D YAKCG + A +LF+ S+
Sbjct: 245 ILSACAHLGALEIGVWIHQHLNQLKLVPLSVRLSTSLLDMYAKCGNLELAKRLFD--SMN 302
Query: 273 RKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLN 332
+++V W ++ISG AMHG GK A++ F M+KVG+KP+ +TF++V ACS+ G+ EGL
Sbjct: 303 MRDVVCWNAMISGMAMHGDGKGALKLFYDMEKVGVKPDDITFIAVFTACSYSGMAYEGLM 362
Query: 333 FFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEIT---DVVVWRTLLGA 389
DKM ++P +HYGCL+D+L RAG E+A I + + + WR L A
Sbjct: 363 LLDKMCSVYNIVPKSEHYGCLVDLLSRAGLFEEAMVMIRKITNSWNGSEETLAWRAFLSA 422
Query: 390 CSFHGNVEMGERVTRKILEMERG-YGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKV 448
C HG ++ E K+L+++ + G YVL+ N+ A G+ DA R+R +M + K
Sbjct: 423 CCNHGETQLAELAAEKVLQLDNHIHSGVYVLLSNLYAASGKHSDARRVRDMMKIKGTNKA 482
Query: 449 PGCSLV 454
PGCS V
Sbjct: 483 PGCSSV 488
>gi|145333528|ref|NP_001078414.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635630|sp|A8MQA3.2|PP330_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g21065
gi|332658994|gb|AEE84394.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 595
Score = 265 bits (677), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 149/423 (35%), Positives = 245/423 (57%), Gaps = 44/423 (10%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNL 92
++NTL+ Y+ + AF LY++++ + P D+ TY FLI+ T++ L
Sbjct: 87 IWNTLIRGYAEIGNSISAFSLYREMR-----VSGLVEP--DTHTYPFLIKAVTTMADVRL 139
Query: 93 GTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVK 152
G +H+V+ + GF S +YV +L+++Y + G + + K+FD+MPE++LV WN +I G +
Sbjct: 140 GETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAE 199
Query: 153 WGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILA 212
G+ E A +L+ EM + + +P TI++
Sbjct: 200 NGKPEEALALYTEMNSKGI--------------------------------KPDGFTIVS 227
Query: 213 VLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVE 272
+L A + G + + +H Y K G T ++ N L+D YA+CG + A LF+++
Sbjct: 228 LLSACAKIGALTLGKRVHVYMIKVGLTR-NLHSSNVLLDLYARCGRVEEAKTLFDEMV-- 284
Query: 273 RKNLVSWTSIISGFAMHGMGKEAVENFGRMQKV-GLKPNRVTFLSVLNACSHGGLVEEGL 331
KN VSWTS+I G A++G GKEA+E F M+ GL P +TF+ +L ACSH G+V+EG
Sbjct: 285 DKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGF 344
Query: 332 NFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACS 391
+F +M EE ++ P I+H+GC++D+L RAG++++A + +P + +VV+WRTLLGAC+
Sbjct: 345 EYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQ-PNVVIWRTLLGACT 403
Query: 392 FHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGC 451
HG+ ++ E +IL++E + GDYVL+ N+ A R+ D +++R+ M KVPG
Sbjct: 404 VHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGH 463
Query: 452 SLV 454
SLV
Sbjct: 464 SLV 466
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/243 (31%), Positives = 125/243 (51%), Gaps = 13/243 (5%)
Query: 156 LEFARSLFE--EMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
+ +A +F E P NV W +I GY + S A +L+R+M EP T +
Sbjct: 69 MSYAHKVFSKIEKPI-NVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFL 127
Query: 214 LPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVER 273
+ A+ DV+ + IH + GF + I V N L+ YA CG + SA K+F+ +
Sbjct: 128 IKAVTTMADVRLGETIHSVVIRSGFGSL-IYVQNSLLHLYANCGDVASAYKVFDKMP--E 184
Query: 274 KNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNF 333
K+LV+W S+I+GFA +G +EA+ + M G+KP+ T +S+L+AC+ G + G
Sbjct: 185 KDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRV 244
Query: 334 FDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITD--VVVWRTLLGACS 391
M+ + + ++ L+D+ R GR+E+A KT E+ D V W +L+ +
Sbjct: 245 HVYMI-KVGLTRNLHSSNVLLDLYARCGRVEEA-KTLF---DEMVDKNSVSWTSLIVGLA 299
Query: 392 FHG 394
+G
Sbjct: 300 VNG 302
>gi|357494311|ref|XP_003617444.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355518779|gb|AET00403.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 542
Score = 265 bits (677), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 148/431 (34%), Positives = 243/431 (56%), Gaps = 28/431 (6%)
Query: 34 FNTLLHFYSLAESPQKAF-----LLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLS 88
+NT++ +S + +PQ A +LY Q+Q Y TY + + A L
Sbjct: 95 WNTIIRAFSRSSTPQFAISLFVDMLYSQIQPQY-------------LTYPSVFKAYAQLG 141
Query: 89 HPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFD----EMPERNLVTWN 144
H + G QLH + K+G Q+ ++ ++ MY + G + ++ ++FD E+ + ++V N
Sbjct: 142 HAHYGAQLHGRVVKLGLQNDQFICNTIIYMYANGGLMSEARRVFDGKKLELYDHDVVAIN 201
Query: 145 VMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTE 204
MI G K GE++ +R+LF++M R VSW +I GY R + EAL LF KM E E
Sbjct: 202 SMIMGYAKCGEIDESRNLFDDMITRTSVSWNSMISGYVRNGKLMEALELFNKM-QVEGFE 260
Query: 205 PSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASK 264
SE T++++L A G ++ + +H Y ++ F ++ V+ +ID Y KCG + +A +
Sbjct: 261 VSEFTMVSLLNACAHLGALQHGKWVHDYIKRNHFE-LNVIVVTAIIDMYCKCGSVENAVE 319
Query: 265 LFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGL-KPNRVTFLSVLNACSH 323
+FE + R+ L W SII G AM+G +EA E F +++ L KP+ V+F+ VL AC H
Sbjct: 320 VFE--TCPRRGLSCWNSIIIGLAMNGHEREAFEFFSKLESSKLLKPDSVSFIGVLTACKH 377
Query: 324 GGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVW 383
G + + ++F+ M+ + E+ P IKHY C++D+LG+AG LE+AE+ G+P + D ++W
Sbjct: 378 LGAINKARDYFELMMNKYEIEPSIKHYTCIVDVLGQAGLLEEAEELIKGMPLK-PDAIIW 436
Query: 384 RTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDER 443
+LL +C H NV++ R +++ E+ YVLM N+ A +F +A R +M E
Sbjct: 437 GSLLSSCRKHRNVQIARRAAQRVYELNPSDASGYVLMSNVHAASNKFEEAIEQRLLMKEN 496
Query: 444 NAFKVPGCSLV 454
K PGCS +
Sbjct: 497 LTEKEPGCSSI 507
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 90/365 (24%), Positives = 162/365 (44%), Gaps = 16/365 (4%)
Query: 78 SFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNT-ALVNMYVSLGFLKDSSKLFDEMP 136
+ L C T++H + Q++ I K G + +T AL G + + KLF MP
Sbjct: 32 TMLQNHCTTINHFH---QIYPHIIKTGLTLNPIASTRALTFCASPSGNINYAYKLFVRMP 88
Query: 137 ERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNV----VSWTGIIDGYTRMNRSNEALA 192
NL +WN +I + +FA SLF +M + +++ + Y ++ ++
Sbjct: 89 NPNLYSWNTIIRAFSRSSTPQFAISLFVDMLYSQIQPQYLTYPSVFKAYAQLGHAHYGAQ 148
Query: 193 LFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDT 252
L ++V + ++ I + ++ NG + S G+K D+ +N +I
Sbjct: 149 LHGRVV--KLGLQNDQFICNTIIYMYANGGLMSEARRVFDGKKLELYDHDVVAINSMIMG 206
Query: 253 YAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRV 312
YAKCG I + LF+D+ + VSW S+ISG+ +G EA+E F +MQ G + +
Sbjct: 207 YAKCGEIDESRNLFDDMIT--RTSVSWNSMISGYVRNGKLMEALELFNKMQVEGFEVSEF 264
Query: 313 TFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALG 372
T +S+LNAC+H G ++ G + ++ ++ +IDM + G +E A +
Sbjct: 265 TMVSLLNACAHLGALQHG-KWVHDYIKRNHFELNVIVVTAIIDMYCKCGSVENAVEVFET 323
Query: 373 IPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGD 432
P + W +++ + +G+ K LE + D V +L G
Sbjct: 324 CPRR--GLSCWNSIIIGLAMNGHEREAFEFFSK-LESSKLLKPDSVSFIGVLTACKHLGA 380
Query: 433 AERLR 437
+ R
Sbjct: 381 INKAR 385
>gi|297738895|emb|CBI28140.3| unnamed protein product [Vitis vinifera]
Length = 580
Score = 265 bits (677), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 152/421 (36%), Positives = 240/421 (57%), Gaps = 17/421 (4%)
Query: 35 NTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLGT 94
N+++ Y+ P++A L Y QL + L P D FT+ L ++C L G
Sbjct: 47 NSIIRGYTNKNLPRQAILFY-QLMML-----QGLDP--DRFTFPSLFKSCGVLCE---GK 95
Query: 95 QLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWG 154
QLH +K+GF S Y+ L+NMY + G L + K+FD+M +++V+W MI +W
Sbjct: 96 QLHCHSTKLGFASDAYIQNTLMNMYSNCGCLVSARKVFDKMVNKSVVSWATMIGAYAQWD 155
Query: 155 ELEFARSLFEEMP-CRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
A LF M N+ W +I+G+ + EAL+LF +M + ++T+ ++
Sbjct: 156 LPHEAIKLFRRMEIASNLFCWNIMINGHVEDSDYEEALSLFNEM-QLSGVKGDKVTMASL 214
Query: 214 LPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVER 273
L A G ++ + +H Y EK D+ + L+D YAKCG I SA ++F+++
Sbjct: 215 LIACTHLGALELGKWLHVYIEKEKIEV-DVALGTALVDMYAKCGSIESAMRVFQEMP--E 271
Query: 274 KNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNF 333
K++++WT++I G AM G G +A+E F MQ +KP+ +TF+ VL ACSH GLV EG+ +
Sbjct: 272 KDVMTWTALIVGLAMCGQGLKALELFHEMQMSEVKPDAITFVGVLAACSHAGLVNEGIAY 331
Query: 334 FDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFH 393
F+ M + + P I+HYGC++DMLGRAGR+ +AE +P D V LL AC H
Sbjct: 332 FNSMPNKYGIQPSIEHYGCMVDMLGRAGRIAEAEDLIQNMPMA-PDYFVLVGLLSACRIH 390
Query: 394 GNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSL 453
GN+ + ER ++++E++ GG YVL+ NI + + + A+++R +M ERN K PGCS
Sbjct: 391 GNLVVAERAAQQLIELDPKNGGTYVLLSNIYSSMKNWEAAKKMRELMVERNIKKPPGCSA 450
Query: 454 V 454
+
Sbjct: 451 I 451
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 131/276 (47%), Gaps = 44/276 (15%)
Query: 145 VMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTE 204
V L G L +AR +F ++P + II GYT N +A+ LF +++ + +
Sbjct: 17 VAFCALHDSGSLPYARLVFNQIPNPTTFTCNSIIRGYTNKNLPRQAI-LFYQLMMLQGLD 75
Query: 205 PSEITILAVLPAIWQN-GDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSAS 263
P T P+++++ G + + +H + K GF A D + N L++ Y+ CGC+ SA
Sbjct: 76 PDRFT----FPSLFKSCGVLCEGKQLHCHSTKLGF-ASDAYIQNTLMNMYSNCGCLVSAR 130
Query: 264 KLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGR---------------------- 301
K+F+ + K++VSW ++I +A + EA++ F R
Sbjct: 131 KVFDKMV--NKSVVSWATMIGAYAQWDLPHEAIKLFRRMEIASNLFCWNIMINGHVEDSD 188
Query: 302 ----------MQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYG 351
MQ G+K ++VT S+L AC+H G +E G + +E+ ++ D+
Sbjct: 189 YEEALSLFNEMQLSGVKGDKVTMASLLIACTHLGALELG-KWLHVYIEKEKIEVDVALGT 247
Query: 352 CLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLL 387
L+DM + G +E A + +P + DV+ W L+
Sbjct: 248 ALVDMYAKCGSIESAMRVFQEMPEK--DVMTWTALI 281
>gi|15227067|ref|NP_178398.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546779|sp|Q8LK93.2|PP145_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g02980
gi|3461822|gb|AAC32916.1| hypothetical protein [Arabidopsis thaliana]
gi|330250557|gb|AEC05651.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 603
Score = 265 bits (677), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 148/422 (35%), Positives = 236/422 (55%), Gaps = 44/422 (10%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNL 92
+FN++ YS +P + F L+ ++ + LP D++T+ L++ CA
Sbjct: 96 IFNSMARGYSRFTNPLEVFSLFVEILE-----DGILP---DNYTFPSLLKACAVAKALEE 147
Query: 93 GTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVK 152
G QLH + K+G +VYV L+NMY + + +FD + E
Sbjct: 148 GRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVE--------------- 192
Query: 153 WGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILA 212
PC VV + +I GY R NR NEAL+LFR+M +Y +P+EIT+L+
Sbjct: 193 --------------PC--VVCYNAMITGYARRNRPNEALSLFREMQG-KYLKPNEITLLS 235
Query: 213 VLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVE 272
VL + G + + IH Y +K F + ++V LID +AKCG + A +FE +
Sbjct: 236 VLSSCALLGSLDLGKWIHKYAKKHSFCKY-VKVNTALIDMFAKCGSLDDAVSIFE--KMR 292
Query: 273 RKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLN 332
K+ +W+++I +A HG ++++ F RM+ ++P+ +TFL +LNACSH G VEEG
Sbjct: 293 YKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRK 352
Query: 333 FFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSF 392
+F +MV + ++P IKHYG ++D+L RAG LE A + +P T ++WR LL ACS
Sbjct: 353 YFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKLPISPTP-MLWRILLAACSS 411
Query: 393 HGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCS 452
H N+++ E+V+ +I E++ +GGDYV++ N+ A ++ + LR+VM +R A KVPGCS
Sbjct: 412 HNNLDLAEKVSERIFELDDSHGGDYVILSNLYARNKKWEYVDSLRKVMKDRKAVKVPGCS 471
Query: 453 LV 454
+
Sbjct: 472 SI 473
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 117/247 (47%), Gaps = 17/247 (6%)
Query: 156 LEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRK-----MVACEYTEPSEITI 210
+ +AR LFE M ++V + + GY+R E +LF + ++ YT PS +
Sbjct: 79 MSYARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKA 138
Query: 211 LAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDIS 270
AV A+ + + +H K G ++ V LI+ Y +C + SA +F+ I
Sbjct: 139 CAVAKALEEG------RQLHCLSMKLGLDD-NVYVCPTLINMYTECEDVDSARCVFDRI- 190
Query: 271 VERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEG 330
VE +V + ++I+G+A EA+ F MQ LKPN +T LSVL++C+ G ++ G
Sbjct: 191 VE-PCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLG 249
Query: 331 LNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGAC 390
+ K ++ +K LIDM + G L+ A ++ D W ++ A
Sbjct: 250 -KWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDA--VSIFEKMRYKDTQAWSAMIVAY 306
Query: 391 SFHGNVE 397
+ HG E
Sbjct: 307 ANHGKAE 313
>gi|357127483|ref|XP_003565409.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Brachypodium distachyon]
Length = 552
Score = 265 bits (676), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 141/379 (37%), Positives = 225/379 (59%), Gaps = 5/379 (1%)
Query: 76 TYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEM 135
TY ++ C + LG Q+H + G + V AL++MY + + +LF+ M
Sbjct: 125 TYITVLSACGKDKYIWLGMQVHKCVVASGVLPDLKVGNALIDMYAECSEMDAAWELFEGM 184
Query: 136 PERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFR 195
RN V+W +I+G ++ G+++ AR+LF+ MP R+ VSWT +IDGY + + EAL +FR
Sbjct: 185 EVRNTVSWTSVISGFLRLGQVDQARTLFDCMPERDTVSWTAMIDGYVQAGQFREALEMFR 244
Query: 196 KMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAK 255
+M + E T+++V+ A Q G +++ + Y + G D V N L+D Y+K
Sbjct: 245 EMQFSK-VRADEFTMVSVVTACAQLGALETGEWARIYMSRHGIK-MDTFVGNALVDMYSK 302
Query: 256 CGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFL 315
CG I A +F+++ + K +WT++I G A++G G+EA+ F RM +V P+ VTF+
Sbjct: 303 CGSIQQALGVFKEMYIRDK--FTWTAVILGLAVNGHGEEAINMFYRMLRVFEAPDEVTFI 360
Query: 316 SVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPS 375
VL AC+H GLV++G +FF M + P++ H+GCLID+LGRAG+L++A +T +P
Sbjct: 361 GVLTACTHAGLVDKGRDFFLSMTGSYGIAPNVMHFGCLIDLLGRAGKLKEALETIGNMPM 420
Query: 376 EITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAER 435
+ +W TLL AC HGN E+G+ +LE++ G Y+L+ N+ A R+ D R
Sbjct: 421 R-PNSAIWGTLLAACRVHGNSEIGQLAAEHLLELDTENGMVYILLSNLYAKSNRWEDVRR 479
Query: 436 LRRVMDERNAFKVPGCSLV 454
LR+V+ E+ K PGCSL+
Sbjct: 480 LRQVIMEKGIKKEPGCSLI 498
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 92/368 (25%), Positives = 148/368 (40%), Gaps = 89/368 (24%)
Query: 73 DSFTYSFLIRTC-ATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKL 131
D++T+ L++ A +G +HA + K G + + +V ++LV MY + G + L
Sbjct: 17 DAYTFPPLLKAVTAAAERGAVGDAVHAHVVKFGMELNAHVASSLVLMYAARGDGAVARTL 76
Query: 132 FDEMPER---NLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSN 188
D P R V WN +I+G + + + F +M VV
Sbjct: 77 LDAWPARGGDTPVVWNALISGHRRSRQFRLSCCSFVDMVRTGVV---------------- 120
Query: 189 EALALFRKMVACEYTEPSEITILAVLPA------IWQNGDVKSCQLIHGYGEKRGFTAFD 242
P+ +T + VL A IW V C + G D
Sbjct: 121 ----------------PTPVTYITVLSACGKDKYIWLGMQVHKCVVASG-------VLPD 157
Query: 243 IRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGF---------------- 286
++V N LID YA+C + +A +LFE + V +N VSWTS+ISGF
Sbjct: 158 LKVGNALIDMYAECSEMDAAWELFEGMEV--RNTVSWTSVISGFLRLGQVDQARTLFDCM 215
Query: 287 ---------------AMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGL 331
G +EA+E F MQ ++ + T +SV+ AC+ G +E G
Sbjct: 216 PERDTVSWTAMIDGYVQAGQFREALEMFREMQFSKVRADEFTMVSVVTACAQLGALETG- 274
Query: 332 NFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSE--ITDVVVWRTLLGA 389
+ + + D L+DM + G ++Q ALG+ E I D W ++
Sbjct: 275 EWARIYMSRHGIKMDTFVGNALVDMYSKCGSIQQ----ALGVFKEMYIRDKFTWTAVILG 330
Query: 390 CSFHGNVE 397
+ +G+ E
Sbjct: 331 LAVNGHGE 338
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 96/235 (40%), Gaps = 46/235 (19%)
Query: 73 DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLF 132
D FT ++ CA L G +S+ G + +V ALV+MY G ++ + +F
Sbjct: 254 DEFTMVSVVTACAQLGALETGEWARIYMSRHGIKMDTFVGNALVDMYSKCGSIQQALGVF 313
Query: 133 DEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALA 192
EM R+ TW +I GL ++G+ EA+
Sbjct: 314 KEMYIRDKFTWTAVILGLA--------------------------VNGH-----GEEAIN 342
Query: 193 LFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQ-----LIHGYGEKRGFTAFDIRVLN 247
+F +M+ + P E+T + VL A G V + + YG A ++
Sbjct: 343 MFYRMLRV-FEAPDEVTFIGVLTACTHAGLVDKGRDFFLSMTGSYG-----IAPNVMHFG 396
Query: 248 CLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHG---MGKEAVENF 299
CLID + G + A + ++ + R N W ++++ +HG +G+ A E+
Sbjct: 397 CLIDLLGRAGKLKEALETIGNMPM-RPNSAIWGTLLAACRVHGNSEIGQLAAEHL 450
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 92/221 (41%), Gaps = 18/221 (8%)
Query: 202 YTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFS 261
YT P +L + A + G V +H + K G + V + L+ YA G
Sbjct: 19 YTFPP---LLKAVTAAAERGAVGDA--VHAHVVKFGME-LNAHVASSLVLMYAARGDGAV 72
Query: 262 ASKLFEDISVERKNL-VSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNA 320
A L + + V W ++ISG + + +F M + G+ P VT+++VL+A
Sbjct: 73 ARTLLDAWPARGGDTPVVWNALISGHRRSRQFRLSCCSFVDMVRTGVVPTPVTYITVLSA 132
Query: 321 CSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDV 380
C + G+ K V VLPD+K LIDM ++ A + G+ E+ +
Sbjct: 133 CGKDKYIWLGMQVH-KCVVASGVLPDLKVGNALIDMYAECSEMDAAWELFEGM--EVRNT 189
Query: 381 VVWRTLLGACSFHGNVE--------MGERVTRKILEMERGY 413
V W +++ G V+ M ER T M GY
Sbjct: 190 VSWTSVISGFLRLGQVDQARTLFDCMPERDTVSWTAMIDGY 230
>gi|357496515|ref|XP_003618546.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355493561|gb|AES74764.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 637
Score = 265 bits (676), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 165/467 (35%), Positives = 257/467 (55%), Gaps = 36/467 (7%)
Query: 16 QIHSHLLTTNSLLHHSQ-LFNTLLHFYSLAESPQKAFLLYKQLQQI------YTHSHSPL 68
Q+H+ + T + + L N LLH Y P A L+ ++ Q YT
Sbjct: 41 QLHATAIVTGLISSPNHFLRNALLHLYGSCSLPSHARKLFDEIPQSHKDSVDYTALIRHC 100
Query: 69 PPL---------------FDSFTYSFLIRTCATLS--HPNLGTQLHAVISKVGFQSHVYV 111
PP D + CA L +G+Q+H + K GF V
Sbjct: 101 PPFESLKLFIQMRQFDLPLDGVVMVCALNACARLGGGDTKVGSQMHVGVVKFGFVKFDKV 160
Query: 112 NTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNV 171
AL+N+YV G + ++ K+F+ + R++V+W+ + GLVKW +E R LF+EMP RN
Sbjct: 161 CNALMNVYVKFGLVGEARKMFEGIEVRSVVSWSCFLEGLVKWESVESGRVLFDEMPERNE 220
Query: 172 VSWTGIIDGYTRMNRSNEALALFRKMV-ACEYTEPSEITILAVLPAIWQNGDVKSCQLIH 230
V+WT +I GY + EA L ++MV C + S +T+ +VL A Q+GDV + +H
Sbjct: 221 VAWTVMIVGYVGNGFTKEAFLLLKEMVFGCGF-RLSFVTLCSVLSACSQSGDVCVGRWVH 279
Query: 231 GYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHG 290
Y K F + V L+D YAKCG I +A +F S+ ++N+V+W +++ G AMHG
Sbjct: 280 CYAVKEMGLDFGVMVGTSLVDMYAKCGRINAALSVFR--SMLKRNVVAWNAMLGGLAMHG 337
Query: 291 MGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHY 350
MGK AV+ F M + +KP+ VTF+++L+ACSH GLVE+G ++F + + P+I+HY
Sbjct: 338 MGKIAVDMFPSMVE-EVKPDGVTFMALLSACSHSGLVEKGWDYFHDLEPVYRIKPEIEHY 396
Query: 351 GCLIDMLGRAGRLEQAE---KTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKIL 407
C++ +LGRAGRLE+AE K P+E VV +L+G+C HG +++GE++ R +L
Sbjct: 397 ACMVGLLGRAGRLEEAEIMVKNMRIPPNE----VVLGSLIGSCYAHGRLQLGEKIMRDLL 452
Query: 408 EMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
EM+ ++++ N+ A G+ A LR+V+ +R KVPG S +
Sbjct: 453 EMDPLNTEYHIVLSNMYALSGKVEKANSLRQVLKKRGIKKVPGMSSI 499
>gi|15240085|ref|NP_196272.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170345|sp|Q9FG16.1|PP367_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g06540
gi|10178110|dbj|BAB11403.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332003649|gb|AED91032.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 622
Score = 265 bits (676), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 150/422 (35%), Positives = 246/422 (58%), Gaps = 13/422 (3%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNL 92
+FN L+ +S P KAF Y Q+ + S + P D+ T+ FLI+ + + +
Sbjct: 84 VFNLLIRCFSTGAEPSKAFGFYTQMLK------SRIWP--DNITFPFLIKASSEMECVLV 135
Query: 93 GTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVK 152
G Q H+ I + GFQ+ VYV +LV+MY + GF+ + ++F +M R++V+W M+ G K
Sbjct: 136 GEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCK 195
Query: 153 WGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILA 212
G +E AR +F+EMP RN+ +W+ +I+GY + N +A+ LF M E +E +++
Sbjct: 196 CGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKR-EGVVANETVMVS 254
Query: 213 VLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVE 272
V+ + G ++ + + Y K T ++ + L+D + +CG I A +FE +
Sbjct: 255 VISSCAHLGALEFGERAYEYVVKSHMTV-NLILGTALVDMFWRCGDIEKAIHVFEGLP-- 311
Query: 273 RKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLN 332
+ +SW+SII G A+HG +A+ F +M +G P VTF +VL+ACSHGGLVE+GL
Sbjct: 312 ETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLE 371
Query: 333 FFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSF 392
++ M ++ + P ++HYGC++DMLGRAG+L +AE L + + + + LLGAC
Sbjct: 372 IYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVK-PNAPILGALLGACKI 430
Query: 393 HGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCS 452
+ N E+ ERV +++++ + G YVL+ NI A G++ E LR +M E+ K PG S
Sbjct: 431 YKNTEVAERVGNMLIKVKPEHSGYYVLLSNIYACAGQWDKIESLRDMMKEKLVKKPPGWS 490
Query: 453 LV 454
L+
Sbjct: 491 LI 492
>gi|449477579|ref|XP_004155062.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g47530-like [Cucumis sativus]
Length = 602
Score = 264 bits (675), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 145/434 (33%), Positives = 242/434 (55%), Gaps = 47/434 (10%)
Query: 22 LTTNSLLHHSQLFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLI 81
L TN + H +N +L YSL+ SP + +Y+ +++ + D + SF +
Sbjct: 86 LLTNPFVSH---YNAMLRAYSLSRSPLEGLYMYRDMERQGVRA--------DPLSSSFAV 134
Query: 82 RTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLV 141
++C L G Q+HA I G Q+ + T+++++Y G +++ KLFD
Sbjct: 135 KSCIKLLSLLFGIQIHARIFINGHQADSLLLTSMMDLYSHCGKPEEACKLFD-------- 186
Query: 142 TWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACE 201
E+P ++VV+W +I TR R+ +AL LF M +
Sbjct: 187 -----------------------EVPQKDVVAWNVLISCLTRNKRTRDALGLFEIMQSPT 223
Query: 202 Y-TEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIF 260
Y +P ++T L +L A ++ + IHGY ++ G+ + + N LI Y++CG +
Sbjct: 224 YLCQPDKVTCLLLLQACADLNALEFGERIHGYIQQHGYNT-ESNLCNSLISMYSRCGRMD 282
Query: 261 SASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNA 320
A ++F+ ++ KN+VSW+++ISG +M+G G+EA+E F MQK G++P TF +VL+A
Sbjct: 283 KAYEVFDKMT--EKNVVSWSAMISGLSMNGHGREAIEAFWEMQKNGVEPGDHTFTAVLSA 340
Query: 321 CSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDV 380
CSH GLV+EG+ FFD+M +E + P++ HYGC++D+LGRAG L+QA + + + D
Sbjct: 341 CSHCGLVDEGMAFFDRMRQEFMIAPNVHHYGCIVDLLGRAGMLDQAYELIMSMEVR-PDA 399
Query: 381 VVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVM 440
+WRTLLGAC HG+ +GER+ ++E++ GDYVL+ NI + G + LR++M
Sbjct: 400 TMWRTLLGACRIHGHGNLGERIVEHLIELKSQEAGDYVLLLNIYSSAGNWDKVTELRKLM 459
Query: 441 DERNAFKVPGCSLV 454
E+ + P C+ +
Sbjct: 460 KEKGIYTTPCCTTI 473
>gi|449464596|ref|XP_004150015.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449529868|ref|XP_004171920.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 734
Score = 264 bits (675), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 150/421 (35%), Positives = 235/421 (55%), Gaps = 44/421 (10%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+N ++ Y+ ++A LL++ +++ + +PP + T ++ CA + +LG
Sbjct: 229 WNAMIAGYAQMGRSKEALLLFEDMRK------ANVPP--NESTIVSVLSACAQSNALDLG 280
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
+ + I G S++ + AL++MY K
Sbjct: 281 NSMRSWIEDRGLCSNLKLVNALIDMYS-------------------------------KC 309
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
G+L+ AR LF++M R+V+SW +I GYT M EALALFR+M+A EP+EIT L++
Sbjct: 310 GDLQTARELFDDMLERDVISWNVMIGGYTHMCSYKEALALFREMLASG-VEPTEITFLSI 368
Query: 214 LPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVER 273
LP+ G + + IH Y K F + + LID YAKCG I +A ++F+ + +
Sbjct: 369 LPSCAHLGAIDLGKWIHAYINK-NFNSVSTSLSTSLIDLYAKCGNIVAARQVFDGMKI-- 425
Query: 274 KNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNF 333
K+L SW ++I G AMHG +A E F +M G++PN +TF+ +L+AC H GLV+ G F
Sbjct: 426 KSLASWNAMICGLAMHGQADKAFELFSKMSSDGIEPNEITFVGILSACKHAGLVDLGQQF 485
Query: 334 FDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFH 393
F MV++ ++ P +HYGC+ID+LGRAG E+AE + + D +W +LLGAC H
Sbjct: 486 FSSMVQDYKISPKSQHYGCMIDLLGRAGLFEEAESLLQNMEVK-PDGAIWGSLLGACRDH 544
Query: 394 GNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSL 453
G VE+GE V ++ E+E G YVL+ NI AG G++ D R+R +++R KVPGC+
Sbjct: 545 GRVELGELVAERLFELEPDNPGAYVLLSNIYAGAGKWDDVARIRTRLNDRGMKKVPGCTT 604
Query: 454 V 454
+
Sbjct: 605 I 605
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 116/365 (31%), Positives = 209/365 (57%), Gaps = 15/365 (4%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNL 92
++N+++ S++ SP A + + ++ IY S + P +S+T+ FL+++CA L+ +
Sbjct: 96 IWNSMIRGLSMSLSPALALVFF--VRMIY----SGVEP--NSYTFPFLLKSCAKLASAHE 147
Query: 93 GTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVK 152
G Q+HA + K+GF S V+++T+L+NMY G + ++ +FD+ R+ +++ +I G
Sbjct: 148 GKQIHAHVLKLGFVSDVFIHTSLINMYAQSGEMNNAQLVFDQSNFRDAISFTALIAGYAL 207
Query: 153 WGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILA 212
WG ++ AR LF+EMP ++VVSW +I GY +M RS EAL LF M P+E TI++
Sbjct: 208 WGYMDRARQLFDEMPVKDVVSWNAMIAGYAQMGRSKEALLLFEDMRKAN-VPPNESTIVS 266
Query: 213 VLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVE 272
VL A Q+ + + + E RG + +++++N LID Y+KCG + +A +LF+D+ +E
Sbjct: 267 VLSACAQSNALDLGNSMRSWIEDRGLCS-NLKLVNALIDMYSKCGDLQTARELFDDM-LE 324
Query: 273 RKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLN 332
R +++SW +I G+ KEA+ F M G++P +TFLS+L +C+H G ++ G
Sbjct: 325 R-DVISWNVMIGGYTHMCSYKEALALFREMLASGVEPTEITFLSILPSCAHLGAIDLG-K 382
Query: 333 FFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSF 392
+ + + LID+ + G + A + G+ +I + W ++ +
Sbjct: 383 WIHAYINKNFNSVSTSLSTSLIDLYAKCGNIVAARQVFDGM--KIKSLASWNAMICGLAM 440
Query: 393 HGNVE 397
HG +
Sbjct: 441 HGQAD 445
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/309 (26%), Positives = 145/309 (46%), Gaps = 23/309 (7%)
Query: 95 QLHAVISKVGFQSHVYVNTALVNMYV--SLGFLKDSSKLFDEMPERNLVTWNVMITGLVK 152
Q+HA I K G + ++ + L+ G + + LF+ + E NL WN MI GL
Sbjct: 47 QIHAHIIKTGLHNTLFALSKLIEFSAVSRSGDISYAISLFNSIEEPNLFIWNSMIRGLSM 106
Query: 153 WGELEFARSLFEEMPCR----NVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEI 208
A F M N ++ ++ ++ ++E + ++ + S++
Sbjct: 107 SLSPALALVFFVRMIYSGVEPNSYTFPFLLKSCAKLASAHEGKQIHAHVLKLGFV--SDV 164
Query: 209 TILAVLPAIW-QNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFE 267
I L ++ Q+G++ + QL+ R +F LI YA G + A +LF+
Sbjct: 165 FIHTSLINMYAQSGEMNNAQLVFDQSNFRDAISF-----TALIAGYALWGYMDRARQLFD 219
Query: 268 DISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLV 327
++ V K++VSW ++I+G+A G KEA+ F M+K + PN T +SVL+AC+ +
Sbjct: 220 EMPV--KDVVSWNAMIAGYAQMGRSKEALLLFEDMRKANVPPNESTIVSVLSACAQSNAL 277
Query: 328 EEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLL 387
+ G N +E+ + ++K LIDM + G L+ A + + DV+ W ++
Sbjct: 278 DLG-NSMRSWIEDRGLCSNLKLVNALIDMYSKCGDLQTARELFDDMLER--DVISWNVMI 334
Query: 388 GA----CSF 392
G CS+
Sbjct: 335 GGYTHMCSY 343
Score = 46.2 bits (108), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 101/231 (43%), Gaps = 18/231 (7%)
Query: 223 VKSCQLIHGYGEKRGF--TAFDIRVLNCLIDTYA--KCGCIFSASKLFEDISVERKNLVS 278
+++ + IH + K G T F L+ LI+ A + G I A LF S+E NL
Sbjct: 42 IRTFKQIHAHIIKTGLHNTLF---ALSKLIEFSAVSRSGDISYAISLFN--SIEEPNLFI 96
Query: 279 WTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMV 338
W S+I G +M A+ F RM G++PN TF +L +C+ EG ++
Sbjct: 97 WNSMIRGLSMSLSPALALVFFVRMIYSGVEPNSYTFPFLLKSCAKLASAHEGKQIHAHVL 156
Query: 339 EECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEM 398
+ + D+ + LI+M ++G + A+ + S D + + L+ + G +
Sbjct: 157 -KLGFVSDVFIHTSLINMYAQSGEMNNAQ--LVFDQSNFRDAISFTALIAGYALWGYM-- 211
Query: 399 GERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVP 449
+R + EM D V ++AG + G ++ + ++ VP
Sbjct: 212 -DRARQLFDEMPV---KDVVSWNAMIAGYAQMGRSKEALLLFEDMRKANVP 258
>gi|15240355|ref|NP_200988.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171532|sp|Q9FLS9.1|PP441_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g61800
gi|10176873|dbj|BAB10080.1| unnamed protein product [Arabidopsis thaliana]
gi|332010136|gb|AED97519.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 499
Score = 264 bits (675), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 151/422 (35%), Positives = 236/422 (55%), Gaps = 22/422 (5%)
Query: 34 FNTLLHFYSLAESPQ---KAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHP 90
FNT++ +L E K F + + + + PP D T+ F+ + CA +
Sbjct: 82 FNTIIRICTLHEPSSLSSKRFFVEMRRRSV--------PP--DFHTFPFVFKACAAKKNG 131
Query: 91 NLG--TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMIT 148
+L LH + G S ++ L+ +Y + + + +LFDE P+R++VT+NV+I
Sbjct: 132 DLTLVKTLHCQALRFGLLSDLFTLNTLIRVYSLIAPIDSALQLFDENPQRDVVTYNVLID 191
Query: 149 GLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEI 208
GLVK E+ AR LF+ MP R++VSW +I GY +MN EA+ LF +MVA +P +
Sbjct: 192 GLVKAREIVRARELFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFDEMVALGL-KPDNV 250
Query: 209 TILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFED 268
I++ L A Q+GD + + IH Y KR D + L+D YAKCG I +A ++FE
Sbjct: 251 AIVSTLSACAQSGDWQKGKAIHDY-TKRKRLFIDSFLATGLVDFYAKCGFIDTAMEIFEL 309
Query: 269 ISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVE 328
S K L +W ++I+G AMHG G+ V+ F +M G+KP+ VTF+SVL CSH GLV+
Sbjct: 310 CS--DKTLFTWNAMITGLAMHGNGELTVDYFRKMVSSGIKPDGVTFISVLVGCSHSGLVD 367
Query: 329 EGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITD---VVVWRT 385
E N FD+M +V ++KHYGC+ D+LGRAG +E+A + +P + + ++ W
Sbjct: 368 EARNLFDQMRSLYDVNREMKHYGCMADLLGRAGLIEEAAEMIEQMPKDGGNREKLLAWSG 427
Query: 386 LLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNA 445
LLG C HGN+E+ E+ ++ + GG Y +M + A R+ + ++R ++D
Sbjct: 428 LLGGCRIHGNIEIAEKAANRVKALSPEDGGVYKVMVEMYANAERWEEVVKVREIIDRDKK 487
Query: 446 FK 447
K
Sbjct: 488 VK 489
>gi|357507475|ref|XP_003624026.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|124360495|gb|ABN08505.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355499041|gb|AES80244.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 646
Score = 264 bits (675), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 147/429 (34%), Positives = 244/429 (56%), Gaps = 32/429 (7%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+N +L Y+ +P++ L+ + SP D T+ +I +C++L P L
Sbjct: 234 WNAMLSGYAQGGAPEETIRLFNDML-------SPGNVQPDETTWVTVISSCSSLGDPCLS 286
Query: 94 TQL-HAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEM---PERNLVTWNVMITG 149
+ + VGF+ + +V TAL++M+ G L+ + K+F+++ R+ V WN MI+
Sbjct: 287 ESIVRKLDDTVGFRPNYFVKTALLDMHAKCGNLEAAHKIFEQLGVYKYRSSVPWNAMISA 346
Query: 150 LVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEIT 209
+ G+L AR LF++MP R+ VSW +I GYT+ S +A+ LF +M++ E ++P E+T
Sbjct: 347 YARVGDLPSARHLFDKMPQRDTVSWNSMIAGYTQNGESVKAIKLFEEMISSEDSKPDEVT 406
Query: 210 ILAVLPAIWQNGDVKSCQLIHGYGE------KRGFTAFDIRVLNCLIDTYAKCGCIFSAS 263
+++V A G++ G G K I V N LI Y++CG + A
Sbjct: 407 MVSVFSACGHLGEL-------GLGNWAVSILKENHIQISISVYNSLISMYSRCGSMQDAV 459
Query: 264 KLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSH 323
+F++++ ++LVS+ ++ISGFA HG G E++E +M++ G++P+R+T++++L ACSH
Sbjct: 460 LIFQEMAT--RDLVSYNTLISGFAEHGHGMESIELLLKMKEDGIEPDRITYIAILTACSH 517
Query: 324 GGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVW 383
GL+ EG F+ + PD+ HY C+IDMLGRAGRLE+A K +P E ++
Sbjct: 518 AGLLGEGQRLFESI-----KFPDVDHYACMIDMLGRAGRLEEAMKLIQSMPME-PHAGIY 571
Query: 384 RTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDER 443
+LL A S H VE+GE K+ ++E G+YVL+ NI A GR+ D +++R M ++
Sbjct: 572 GSLLNATSIHKQVELGELAAAKLFKVEPHNSGNYVLLSNIYASAGRWKDGDKVRDTMRKQ 631
Query: 444 NAFKVPGCS 452
K G S
Sbjct: 632 GVKKTTGLS 640
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 127/482 (26%), Positives = 212/482 (43%), Gaps = 99/482 (20%)
Query: 32 QLFNTLLHFYS-LAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHP 90
++F +L +YS + Q L+K + + H + P ++ YS ++++ + S
Sbjct: 68 RVFTFMLKYYSQIGVRAQVPVSLFKHMLR-----HCNIKP--NTSFYSVMMKSAGSESML 120
Query: 91 NLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPER------------ 138
L A + K G+ YV ++ +Y G ++ + KLFDEMP+R
Sbjct: 121 FL-----AHVLKSGYDRDHYVRNGILGIYAKYGPIEFARKLFDEMPDRTVADWNVMISGY 175
Query: 139 -----------------------NLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWT 175
N++TW MITG K G L+ AR F++MP R+VVSW
Sbjct: 176 WKCGNEEEASTLFHVMGDQEISRNVITWTTMITGHAKKGNLKTARMYFDKMPERSVVSWN 235
Query: 176 GIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGD-VKSCQLIHGYGE 234
++ GY + E + LF M++ +P E T + V+ + GD S ++ +
Sbjct: 236 AMLSGYAQGGAPEETIRLFNDMLSPGNVQPDETTWVTVISSCSSLGDPCLSESIVRKLDD 295
Query: 235 KRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISV----------------------- 271
GF + V L+D +AKCG + +A K+FE + V
Sbjct: 296 TVGFRP-NYFVKTALLDMHAKCGNLEAAHKIFEQLGVYKYRSSVPWNAMISAYARVGDLP 354
Query: 272 ---------ERKNLVSWTSIISGFAMHGMGKEAVENFGRM-QKVGLKPNRVTFLSVLNAC 321
+++ VSW S+I+G+ +G +A++ F M KP+ VT +SV +AC
Sbjct: 355 SARHLFDKMPQRDTVSWNSMIAGYTQNGESVKAIKLFEEMISSEDSKPDEVTMVSVFSAC 414
Query: 322 SHGGLVEEGL-NFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEIT-- 378
H G E GL N+ +++E + I Y LI M R G ++ A+ I E+
Sbjct: 415 GHLG--ELGLGNWAVSILKENHIQISISVYNSLISMYSRCGSMQD----AVLIFQEMATR 468
Query: 379 DVVVWRTLLGACSFHGNVEMGERVTRKILEM-ERGYGGD---YVLMYNILAGVGRFGDAE 434
D+V + TL+ + HG+ G +L+M E G D Y+ + + G G+ +
Sbjct: 469 DLVSYNTLISGFAEHGH---GMESIELLLKMKEDGIEPDRITYIAILTACSHAGLLGEGQ 525
Query: 435 RL 436
RL
Sbjct: 526 RL 527
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 95/209 (45%), Gaps = 11/209 (5%)
Query: 242 DIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGR 301
D V N ++ YAK G I A KLF+++ + + W +ISG+ G +EA F
Sbjct: 133 DHYVRNGILGIYAKYGPIEFARKLFDEMP--DRTVADWNVMISGYWKCGNEEEASTLFHV 190
Query: 302 MQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAG 361
M + N +T+ +++ + G ++ +FDKM E V + ++ + G
Sbjct: 191 MGDQEISRNVITWTTMITGHAKKGNLKTARMYFDKMPERSVV-----SWNAMLSGYAQGG 245
Query: 362 RLEQAEK--TALGIPSEIT-DVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYV 418
E+ + + P + D W T++ +CS G+ + E + RK L+ G+ +Y
Sbjct: 246 APEETIRLFNDMLSPGNVQPDETTWVTVISSCSSLGDPCLSESIVRK-LDDTVGFRPNYF 304
Query: 419 LMYNILAGVGRFGDAERLRRVMDERNAFK 447
+ +L + G+ E ++ ++ +K
Sbjct: 305 VKTALLDMHAKCGNLEAAHKIFEQLGVYK 333
>gi|242066664|ref|XP_002454621.1| hypothetical protein SORBIDRAFT_04g034420 [Sorghum bicolor]
gi|241934452|gb|EES07597.1| hypothetical protein SORBIDRAFT_04g034420 [Sorghum bicolor]
Length = 496
Score = 264 bits (675), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 145/394 (36%), Positives = 233/394 (59%), Gaps = 12/394 (3%)
Query: 66 SPLPPLFDSFTYSFLIRTCA-----TLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYV 120
SP P + T ++ CA L+ P L LHA K+ F SH+ ++T L Y+
Sbjct: 61 SPAAPAPNDVTLLTVLSACADSPSSPLARP-LALTLHARALKL-FPSHLLLSTCLARFYL 118
Query: 121 SLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDG 180
+ + +LFD MP R++VT+N M++GL++ G ++ A +F+ MP + VSWT +IDG
Sbjct: 119 ASRLPHLALQLFDTMPVRSVVTYNTMVSGLMRNGLVDAAFEVFDGMPGPDKVSWTALIDG 178
Query: 181 YTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTA 240
+ + R +EA+ FR M+ + EP +T++AV+ A + G + +H ++G
Sbjct: 179 FVKNGRHDEAIDCFRAML-LDSVEPDYVTLIAVVSACAEVGALGLGMWVHRLVLRQGLER 237
Query: 241 FDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFG 300
++RV N LID YA+CG + A+++F S+ ++ +VSW S+I G A +G+ EA+E F
Sbjct: 238 -NVRVANSLIDMYARCGQVKLAAQVFH--SIRKRTVVSWNSMIVGLAANGLCTEAIELFE 294
Query: 301 RMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRA 360
M++ G KP+ VT VL ACSH GL E GL ++D M E + ++HYGC++D+LGRA
Sbjct: 295 EMRRQGFKPDAVTLTGVLTACSHAGLTEHGLRYYDLMTTEYGIAARMEHYGCVVDLLGRA 354
Query: 361 GRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLM 420
GRL++A +P +VV+ LL C HG+++M E++ + + E++ G +YVL+
Sbjct: 355 GRLDEAMHVVETMPMRPNEVVLG-ALLAGCRMHGDLDMAEQLMQHLFELDPGGDANYVLL 413
Query: 421 YNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
NI A VG++ A ++R +M R K PG S+V
Sbjct: 414 SNIYAAVGKWDGAGKVRSLMKARGVKKRPGHSIV 447
>gi|449435364|ref|XP_004135465.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g40405-like [Cucumis sativus]
Length = 614
Score = 264 bits (675), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 151/448 (33%), Positives = 254/448 (56%), Gaps = 17/448 (3%)
Query: 12 NITTQIHSHLLTTNSLLHHSQ---LF--NTLLHFYSLAESPQKAFLLYKQLQQIYTHSHS 66
+I + ++LL +N +L LF N+++ YS + +P K+F Y ++ Q S+
Sbjct: 50 SIAVRNPTNLLYSNQILDQCAKPTLFALNSMIRAYSKSLTPHKSFQFYNKILQ----SND 105
Query: 67 PLPPLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLK 126
+ P D++T++FL+RTCA S G +H + K GF+ +V + L+ MY + L
Sbjct: 106 VMSP--DNYTFNFLVRTCAQ-SACEAGPAVHGALIKHGFEYDPHVESGLIFMYAEMSCLS 162
Query: 127 DSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNR 186
++F+ + + +LV M++ K G++ FAR+LF+ MP R+ VSW +I GY + +
Sbjct: 163 SCHRVFESVQKPDLVCQTTMVSACAKCGDIGFARNLFDSMPQRDFVSWNAMIAGYAQRGQ 222
Query: 187 SNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVL 246
S EAL LF K++ + + +E+++++V+ A G + + H Y EK + +
Sbjct: 223 SREALNLF-KLMQMDGVKVNEVSMISVVTACTHLGALDQGKWAHAYIEKNKIQ-MTVNLG 280
Query: 247 NCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVG 306
L+D Y KCG + A K+F +++ KN+ +W++ I G AM+G G++ +E F M+ G
Sbjct: 281 TALVDMYFKCGNVDRALKVFWEMN--EKNVYTWSTAIGGLAMNGYGQKCLELFSFMKHEG 338
Query: 307 LKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQA 366
+ PN +TF+SVL CS G V+EG + FD M + + P ++HYGC++D+ GRAGRLE+A
Sbjct: 339 IAPNEITFISVLKGCSVVGFVDEGRSHFDSMKRDHGIEPRLEHYGCMVDLYGRAGRLEEA 398
Query: 367 EKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAG 426
+P + W LL AC + N+E+GE +RK++E+E G YV + NI A
Sbjct: 399 LNFINTMPLK-PHAGAWGALLNACRMYKNMELGEFASRKLIEVEGKNHGAYVSLSNIYAD 457
Query: 427 VGRFGDAERLRRVMDERNAFKVPGCSLV 454
G + +R+ M K+PGCS++
Sbjct: 458 TGNWDRVSNVRQSMKAEGISKLPGCSVM 485
>gi|449486568|ref|XP_004157334.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g20540-like [Cucumis sativus]
Length = 532
Score = 264 bits (675), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 141/385 (36%), Positives = 224/385 (58%), Gaps = 8/385 (2%)
Query: 73 DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLF 132
D++T ++++ A +++ +LG +HA K+G + +V +L+ MY S ++ + ++F
Sbjct: 104 DTYTLPYVLKASARMTNIHLGESIHACTIKLGSAVNEFVGNSLLVMYRSFDNMRSARQVF 163
Query: 133 DEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALA 192
DEMPE + V+W VMI G G+++ AR LF+ ++ W +I GY + N E L
Sbjct: 164 DEMPELSAVSWTVMIYGYANMGDVDTARELFDMATVKDTGIWGAMISGYVQNNCFKEGLH 223
Query: 193 LFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDT 252
+FR M E EP E I+ +L A G + + IH Y + G +RV LID
Sbjct: 224 MFRLMQLTE-VEPDEAIIVTILSACAHMGALDTGIWIHRYLGRLGLP-LTLRVSTGLIDM 281
Query: 253 YAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRV 312
YAKCG + A LF ++S +R N V W ++ISG AM G G+ A++ F M+K G+KP+ +
Sbjct: 282 YAKCGHLDLAKYLFNEMS-QRDN-VCWNAMISGMAMDGDGEGAIKLFMEMEKAGIKPDNI 339
Query: 313 TFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALG 372
TF++V ACS+ G+V+EG+ +++M ++ P +HYGC+ID+L R GR E+AE
Sbjct: 340 TFIAVWXACSNSGMVDEGIRIWNRMSTVHKIEPKSEHYGCVIDLLSRVGRFEEAEGVIQR 399
Query: 373 IP---SEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGR 429
+P S + V WR L AC HG + E ++ ++ER + G YVL+ N+ A +G+
Sbjct: 400 LPKTASPSEEAVAWRAFLSACCKHGQTQQAEVAAERLFQLER-HSGAYVLLSNMYAALGK 458
Query: 430 FGDAERLRRVMDERNAFKVPGCSLV 454
DA+R+R +M + KVPGCS +
Sbjct: 459 HEDAKRVRNMMKLKGVEKVPGCSSI 483
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 76/341 (22%), Positives = 153/341 (44%), Gaps = 25/341 (7%)
Query: 79 FLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSL--GFLKDSSKLFDEMP 136
L+ C + N Q HA + K G + +V + L+N G L + KLF +
Sbjct: 10 LLLHKCINM---NQLKQAHAQVLKSGLHNSNFVLSRLLNFCAESRNGSLSHAFKLFQHIQ 66
Query: 137 ERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRK 196
+ +N MI L+ GE A ++F + + T + + + + L
Sbjct: 67 HPTICIFNTMIKALLLRGEFLNAIAVFSAIFRNGIHPDTYTLPYVLKASARMTNIHLGES 126
Query: 197 MVACEYTEPSEIT--ILAVLPAIWQNGD-VKSCQLIHGYGEKRGFTAFDIRVLNCLIDTY 253
+ AC S + + L ++++ D ++S + + + E +A V +I Y
Sbjct: 127 IHACTIKLGSAVNEFVGNSLLVMYRSFDNMRSARQV--FDEMPELSAVSWTV---MIYGY 181
Query: 254 AKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVT 313
A G + +A +LF+ +V+ + W ++ISG+ + KE + F MQ ++P+
Sbjct: 182 ANMGDVDTARELFDMATVKDTGI--WGAMISGYVQNNCFKEGLHMFRLMQLTEVEPDEAI 239
Query: 314 FLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGI 373
+++L+AC+H G ++ G+ + + + + ++ LIDM + G L+ A+ +
Sbjct: 240 IVTILSACAHMGALDTGI-WIHRYLGRLGLPLTLRVSTGLIDMYAKCGHLDLAKY----L 294
Query: 374 PSEIT--DVVVWRTLLGACSFHGNVEMGERVTRKILEMERG 412
+E++ D V W ++ + G+ GE + +EME+
Sbjct: 295 FNEMSQRDNVCWNAMISGMAMDGD---GEGAIKLFMEMEKA 332
>gi|356540333|ref|XP_003538644.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14820-like [Glycine max]
Length = 721
Score = 264 bits (675), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 135/382 (35%), Positives = 222/382 (58%), Gaps = 5/382 (1%)
Query: 73 DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLF 132
D+ ++ CA + + G +H I GF+ ++ T+LVNMY + G + + +++
Sbjct: 216 DAIILCTVLSACAHAGNLSYGKAIHQFIKDNGFRVGSHIQTSLVNMYANCGAMHLAREVY 275
Query: 133 DEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALA 192
D++P +++V M++G K G ++ AR +F+ M +++V W+ +I GY + EAL
Sbjct: 276 DQLPSKHMVVSTAMLSGYAKLGMVQDARFIFDRMVEKDLVCWSAMISGYAESYQPLEALQ 335
Query: 193 LFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDT 252
LF +M P +IT+L+V+ A G + + IH Y +K GF + + N LID
Sbjct: 336 LFNEMQRRRIV-PDQITMLSVISACANVGALVQAKWIHTYADKNGF-GRTLPINNALIDM 393
Query: 253 YAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRV 312
YAKCG + A ++FE++ RKN++SW+S+I+ FAMHG A+ F RM++ ++PN V
Sbjct: 394 YAKCGNLVKAREVFENMP--RKNVISWSSMINAFAMHGDADSAIALFHRMKEQNIEPNGV 451
Query: 313 TFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALG 372
TF+ VL ACSH GLVEEG FF M+ E + P +HYGC++D+ RA L +A +
Sbjct: 452 TFIGVLYACSHAGLVEEGQKFFSSMINEHRISPQREHYGCMVDLYCRANHLRKAMELIET 511
Query: 373 IPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGD 432
+P +V++W +L+ AC HG +E+GE ++LE+E + G V++ NI A R+ D
Sbjct: 512 MPFP-PNVIIWGSLMSACQNHGEIELGEFAATRLLELEPDHDGALVVLSNIYAKEKRWDD 570
Query: 433 AERLRRVMDERNAFKVPGCSLV 454
+R++M + K CS +
Sbjct: 571 VGLVRKLMKHKGVSKEKACSRI 592
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 98/398 (24%), Positives = 181/398 (45%), Gaps = 76/398 (19%)
Query: 31 SQLFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHP 90
++ N LL +S +P+ LY L++ + P D F++ L++ + LS
Sbjct: 80 TRFSNQLLRQFSRGPTPENTLSLYLHLRR------NGFP--LDRFSFPPLLKAVSKLSAL 131
Query: 91 NLGTQLHAVISKVGF-QSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITG 149
NLG ++H + SK GF + ++ +AL+ MY + G + D
Sbjct: 132 NLGLEIHGLASKFGFFHADPFIQSALIAMYAACGRIMD---------------------- 169
Query: 150 LVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEIT 209
AR LF++M R+VV+W +IDGY++ + L L+ +M TEP I
Sbjct: 170 ---------ARFLFDKMSHRDVVTWNIMIDGYSQNAHYDHVLKLYEEM-KTSGTEPDAII 219
Query: 210 ILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDI 269
+ VL A G++ + IH + + GF + L++ YA CG + A ++++ +
Sbjct: 220 LCTVLSACAHAGNLSYGKAIHQFIKDNGFRVGS-HIQTSLVNMYANCGAMHLAREVYDQL 278
Query: 270 SVE-----------------------------RKNLVSWTSIISGFAMHGMGKEAVENFG 300
+ K+LV W+++ISG+A EA++ F
Sbjct: 279 PSKHMVVSTAMLSGYAKLGMVQDARFIFDRMVEKDLVCWSAMISGYAESYQPLEALQLFN 338
Query: 301 RMQKVGLKPNRVTFLSVLNACSH-GGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGR 359
MQ+ + P+++T LSV++AC++ G LV+ + ++ + LIDM +
Sbjct: 339 EMQRRRIVPDQITMLSVISACANVGALVQA--KWIHTYADKNGFGRTLPINNALIDMYAK 396
Query: 360 AGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVE 397
G L +A + +P + +V+ W +++ A + HG+ +
Sbjct: 397 CGNLVKAREVFENMPRK--NVISWSSMINAFAMHGDAD 432
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 65/291 (22%), Positives = 125/291 (42%), Gaps = 10/291 (3%)
Query: 156 LEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLP 215
L++A SLF +P ++ ++R L+L+ + + + +L
Sbjct: 65 LDYALSLFSHIPNPPTRFSNQLLRQFSRGPTPENTLSLYLHLRRNGFPL-DRFSFPPLLK 123
Query: 216 AIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKN 275
A+ + + IHG K GF D + + LI YA CG I A LF+ +S ++
Sbjct: 124 AVSKLSALNLGLEIHGLASKFGFFHADPFIQSALIAMYAACGRIMDARFLFDKMS--HRD 181
Query: 276 LVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFD 335
+V+W +I G++ + ++ + M+ G +P+ + +VL+AC+H G + G
Sbjct: 182 VVTWNIMIDGYSQNAHYDHVLKLYEEMKTSGTEPDAIILCTVLSACAHAGNLSYG-KAIH 240
Query: 336 KMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGN 395
+ +++ L++M G + A + +PS+ +VV +L + G
Sbjct: 241 QFIKDNGFRVGSHIQTSLVNMYANCGAMHLAREVYDQLPSK--HMVVSTAMLSGYAKLGM 298
Query: 396 VE----MGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDE 442
V+ + +R+ K L Y Y L + F + +R R V D+
Sbjct: 299 VQDARFIFDRMVEKDLVCWSAMISGYAESYQPLEALQLFNEMQRRRIVPDQ 349
>gi|225433758|ref|XP_002267783.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Vitis vinifera]
Length = 636
Score = 264 bits (674), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 160/482 (33%), Positives = 259/482 (53%), Gaps = 59/482 (12%)
Query: 17 IHSHLLTTNSLLHHSQLFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFT 76
+++ + ++ + + + NT++ Y+ + P KA LY + + S D FT
Sbjct: 163 VYAQAIFEDTAMDNPFVCNTMIRAYAKSVFPIKAIYLYNFMHRKDIKS--------DHFT 214
Query: 77 YSFLIRTCATLSHPN-------------LGTQLHAVISKVGFQSHVYVNTALVNMYVSLG 123
Y F ++ CA + N G ++H + ++G ++ +LV +Y G
Sbjct: 215 YPFGLKACARVLWCNEGDIKCTQLDIACKGAEIHCRLFRLGLDQDCFIQNSLVYLYSQCG 274
Query: 124 FLKDSSKLFDEMPERNLVTWNVMITG---------------------LVKW--------- 153
FL + +FDEM E+ + +WNVMI+ +V W
Sbjct: 275 FLDLARCVFDEMTEKTITSWNVMISAYDQINDFDSADSLIGSMPGKNVVSWNMLIARYIR 334
Query: 154 -GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILA 212
G++E A+ +F+EMP R+ VSW +I GY ++ ALALFR+M E ++IT+++
Sbjct: 335 LGKIEDAKVVFQEMPERDAVSWNSMIAGYVQIKDYARALALFREMEIAN-VEATDITLIS 393
Query: 213 VLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVE 272
VL A + G ++ + IH ++R + + + N L+D YAKCG + A ++F ++ +
Sbjct: 394 VLGACAETGALEIGRKIHLSLKQREYK-IEGYLSNALVDMYAKCGHLNLAWEVFSELKM- 451
Query: 273 RKNLVSWTSIISGFAMHGMGKEAVENFGRMQKV--GLKPNRVTFLSVLNACSHGGLVEEG 330
K++ W ++I A+HG +EA+ F M+ G +PNRVTF+ VL ACSH GLV+EG
Sbjct: 452 -KHISCWNAMIVSLAVHGYCEEALRLFSTMEMSVDGARPNRVTFIGVLIACSHKGLVDEG 510
Query: 331 LNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGAC 390
FF++MV E +++PDIKHYGC++D+L R G L++A +P E + V+WRTLLGAC
Sbjct: 511 RTFFNRMVNEYKIMPDIKHYGCMVDLLSRCGLLKEAHHMIKTMPFE-ANSVLWRTLLGAC 569
Query: 391 SFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPG 450
H +V++ E +++ +ME GDYVL+ NI A R+ D ER+R M K PG
Sbjct: 570 RVHHHVDLAEESFQQLGKMEPLRDGDYVLLSNIYAEAQRWNDVERVRSEMIGSGVPKKPG 629
Query: 451 CS 452
S
Sbjct: 630 SS 631
>gi|449434238|ref|XP_004134903.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
Length = 609
Score = 264 bits (674), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 152/446 (34%), Positives = 248/446 (55%), Gaps = 48/446 (10%)
Query: 9 TPNNITTQIHSHLLTTNSLLHHSQLFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPL 68
P + QI + + N +NT++ ++ +E+P A L+ Q+ H+ S +
Sbjct: 83 APMSFAAQIFNQIQAPNIFT-----WNTMIRGFAESENPSPAVELFSQM-----HAASSI 132
Query: 69 PPLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDS 128
P D+ T+ FL + A L +LG +H+V+ + GF S +V +LV+MY GF
Sbjct: 133 LP--DTHTFPFLFKAVAKLMDVSLGEGIHSVVVRNGFDSLRFVQNSLVHMYSVFGFA--- 187
Query: 129 SKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSN 188
E A +FE M R+ V+W +I+G+ N
Sbjct: 188 ----------------------------ESAYQVFEIMSYRDRVAWNSVINGFALNGMPN 219
Query: 189 EALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNC 248
EAL L+R+M E EP T++++L A + G + + +H Y K G + N
Sbjct: 220 EALTLYREM-GSEGVEPDGFTMVSLLSACVELGALALGERVHMYMVKVGLVQ-NQHASNA 277
Query: 249 LIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLK 308
L+D Y+KCG A K+F+++ E +++VSWTS+I G A++G+G EA++ FG +++ GLK
Sbjct: 278 LLDLYSKCGNFRDAQKVFDEM--EERSVVSWTSLIVGLAVNGLGNEALKLFGELERQGLK 335
Query: 309 PNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEK 368
P+ +TF+ VL ACSH G+++EG N+F +M EE +LP I+H+GC++D+L RAG++ A
Sbjct: 336 PSEITFVGVLYACSHCGMLDEGFNYFRRMKEEYGILPRIEHHGCMVDLLCRAGKVGDAYD 395
Query: 369 TALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVG 428
+P + V+WRTLLGAC+ HG++E+GE +I +E+ + GD+VL+ N+ A
Sbjct: 396 YIRNMPVP-PNAVIWRTLLGACTIHGHLELGEVARAEIQRLEQRHSGDFVLLSNLYASER 454
Query: 429 RFGDAERLRRVMDERNAFKVPGCSLV 454
R+ D + +R++M + K PG SLV
Sbjct: 455 RWLDVQNVRKIMLMKGVKKTPGYSLV 480
>gi|225468727|ref|XP_002271484.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Vitis vinifera]
Length = 558
Score = 264 bits (674), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 141/382 (36%), Positives = 221/382 (57%), Gaps = 38/382 (9%)
Query: 73 DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLF 132
D FT+ F+++ CA L G LH+++ K+GF S VYV L++ Y GFL
Sbjct: 86 DHFTFPFVLKACARL---QTGLDLHSLLFKLGFDSDVYVQNGLIHFYGCCGFL------- 135
Query: 133 DEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALA 192
+FA +FEEMP R++VSW+ +I + + EALA
Sbjct: 136 ------------------------DFALKVFEEMPERDLVSWSSMIACFAKNGFGYEALA 171
Query: 193 LFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDT 252
LF++M +P E+ +L+V+ AI GD++ + I G+ + G F + + L+D
Sbjct: 172 LFQRMQLVGTVKPDEVIVLSVVSAISILGDLELGKWIRGFISRNGLE-FTVSLGTALVDM 230
Query: 253 YAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRV 312
+++CGCI + ++F+++ +N+++WT++I+G A+HG EA+ F M+ G +P+ V
Sbjct: 231 FSRCGCIEESMRVFDEMG--ERNVLTWTALINGLAVHGRSAEALRMFYEMRNHGFQPDHV 288
Query: 313 TFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALG 372
TF VL ACSHGGLV EG + F+ + E + P +HYGC++D+LGRAG L +A K G
Sbjct: 289 TFTGVLVACSHGGLVSEGWHVFESIRNEYGMEPLPEHYGCMVDLLGRAGLLNEACKFVDG 348
Query: 373 IPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGD 432
+P + ++WRTLLGAC H +E+ E+V KI E++ + GDYVL+ N+ GVGR+ +
Sbjct: 349 MPIR-PNSIIWRTLLGACVNHNYIELAEKVKEKINELDSYHDGDYVLLSNVYGGVGRWAE 407
Query: 433 AERLRRVMDERNAFKVPGCSLV 454
+R M E+ K PGCSL+
Sbjct: 408 KAGVRNSMREKRISKKPGCSLI 429
>gi|326520445|dbj|BAK07481.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 596
Score = 264 bits (674), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 153/421 (36%), Positives = 234/421 (55%), Gaps = 44/421 (10%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
NT+L + + P+ A L+++ PP D+ TY L++ C L G
Sbjct: 91 LNTVLRIAASSAHPRIALALHRRRLA---------PP--DTHTYPPLLQACTRLLALREG 139
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
LHA +K G + V+V +LV+ Y + G + + ++FDE+P
Sbjct: 140 ESLHAEAAKNGLVALVFVKNSLVHHYGACGLFESAHRVFDEIP----------------- 182
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
+ E RN+VSW +++G+ R NE L +FR+ + + P TI++V
Sbjct: 183 --------VLE----RNLVSWNSVMNGFAANGRPNEVLTIFRETLEADLM-PDGFTIVSV 229
Query: 214 LPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVER 273
L A + G + + +H + K G + V N LID YAKCG + A K+FE++ V R
Sbjct: 230 LTACAEIGALTLGRRVHVFASKVGLVG-NSHVGNALIDLYAKCGGVEDAWKVFEEMGVAR 288
Query: 274 KNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNF 333
+VSWTS+I G A +G GK+A+E FG M++ L P +T + VL ACSH GLV++G +
Sbjct: 289 -TVVSWTSLIVGLAGNGFGKDALELFGLMERERLIPTDITMVGVLYACSHCGLVDDGFRY 347
Query: 334 FDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFH 393
F++M ++ + P I+H GC++D+LGRAGR+E+A +P E + VVWRTLLGAC+ H
Sbjct: 348 FNEMQDKYGIAPGIEHLGCMVDLLGRAGRVEEAHNYITTMPVE-PNAVVWRTLLGACAMH 406
Query: 394 GNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSL 453
+E+GE +++E++ G+ GDYVL+ N+ A VGR+ DA LR+ M K PG SL
Sbjct: 407 KKLELGEAAWARLVELDPGHSGDYVLLSNLYAAVGRWADAHVLRKTMATHGVRKNPGHSL 466
Query: 454 V 454
V
Sbjct: 467 V 467
>gi|15228653|ref|NP_189568.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75273910|sp|Q9LS72.1|PP261_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g29230
gi|9293916|dbj|BAB01819.1| unnamed protein product [Arabidopsis thaliana]
gi|332644032|gb|AEE77553.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 600
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 153/488 (31%), Positives = 250/488 (51%), Gaps = 77/488 (15%)
Query: 32 QLFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPN 91
L N+L+ ++ P +AF ++ ++Q+ + D+FTY FL++ C+ S
Sbjct: 83 HLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFA--------DNFTYPFLLKACSGQSWLP 134
Query: 92 LGTQLHAVISKVGFQSHVYVNTALVNMY-------------------------------- 119
+ +H I K+G S +YV AL++ Y
Sbjct: 135 VVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGG 194
Query: 120 -VSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGII 178
V G L+D+ +LFDEMP+R+L++WN M+ G + E+ A LFE+MP RN VSW+ ++
Sbjct: 195 LVKAGELRDARRLFDEMPQRDLISWNTMLDGYARCREMSKAFELFEKMPERNTVSWSTMV 254
Query: 179 DGYTRMNRSNEALALFRKM------------VACEYTEP--------------------S 206
GY++ A +F KM + Y E
Sbjct: 255 MGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFD 314
Query: 207 EITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLF 266
++++L A ++G + IH KR + VLN L+D YAKCG + A +F
Sbjct: 315 AAAVISILAACTESGLLSLGMRIHSI-LKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVF 373
Query: 267 EDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGL 326
DI +K+LVSW +++ G +HG GKEA+E F RM++ G++P++VTF++VL +C+H GL
Sbjct: 374 NDIP--KKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGL 431
Query: 327 VEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTL 386
++EG+++F M + +++P ++HYGCL+D+LGR GRL++A K +P E +VV+W L
Sbjct: 432 IDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPME-PNVVIWGAL 490
Query: 387 LGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAF 446
LGAC H V++ + V +++++ G+Y L+ NI A + +R M
Sbjct: 491 LGACRMHNEVDIAKEVLDNLVKLDPCDPGNYSLLSNIYAAAEDWEGVADIRSKMKSMGVE 550
Query: 447 KVPGCSLV 454
K G S V
Sbjct: 551 KPSGASSV 558
Score = 40.0 bits (92), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 83/208 (39%), Gaps = 16/208 (7%)
Query: 242 DIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGR 301
D+ + LI + C A ++F V+ N+ S+I A + +A F
Sbjct: 50 DLHIAPKLISALSLCRQTNLAVRVFN--QVQEPNVHLCNSLIRAHAQNSQPYQAFFVFSE 107
Query: 302 MQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAG 361
MQ+ GL + T+ +L ACS G + +E+ + DI LID R G
Sbjct: 108 MQRFGLFADNFTYPFLLKACS-GQSWLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCG 166
Query: 362 RLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGE-RVTRKIL-EMERGYGGDYVL 419
L + L D V W ++LG G V+ GE R R++ EM + D +
Sbjct: 167 GLGVRDAMKLFEKMSERDTVSWNSMLG-----GLVKAGELRDARRLFDEMPQ---RDLIS 218
Query: 420 MYNILAGVGR---FGDAERLRRVMDERN 444
+L G R A L M ERN
Sbjct: 219 WNTMLDGYARCREMSKAFELFEKMPERN 246
>gi|297741272|emb|CBI32403.3| unnamed protein product [Vitis vinifera]
Length = 658
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 155/494 (31%), Positives = 258/494 (52%), Gaps = 60/494 (12%)
Query: 13 ITTQIHSHLLTTNSLLHHSQLFNTLLHFYSLAESPQKAFLLYKQLQQIYTHS---HSPLP 69
+ ++ S ++T + ++ L + L + + PQK + + Y H+ H +
Sbjct: 44 VAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYAWNSMISAYVHNGHFHEAIG 103
Query: 70 PLF----------DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMY 119
+ D +T+ +++ C TL G ++H K+GFQ +V+V +L++MY
Sbjct: 104 CFYQLLLVSEIRPDFYTFPPVLKACGTLVD---GRKIHCWAFKLGFQWNVFVAASLIHMY 160
Query: 120 VSLGFLKDSSKLFDEMPERNLVTWNVMITGLV---------------------------- 151
GF + LFD+MP R++ +WN MI+GL+
Sbjct: 161 SRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIKMNFVTVV 220
Query: 152 -----------KWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVAC 200
K G L+ A +FE +P ++V+SW +I GY + ++EA+ +++ M C
Sbjct: 221 SILPVFVDMYAKLGLLDSAHKVFEIIPVKDVISWNTLITGYAQNGLASEAIEVYKMMEEC 280
Query: 201 EYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIF 260
+ P++ T +++LPA G ++ IHG K D+ V CLID Y KCG +
Sbjct: 281 KEIIPNQGTWVSILPAYAHVGALQQGMKIHGRVIKTNLH-LDVFVATCLIDVYGKCGRLV 339
Query: 261 SASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNA 320
A LF V +++ V+W +IIS +HG ++ ++ FG M G+KP+ VTF+S+L+A
Sbjct: 340 DAMSLF--YQVPQESSVTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSA 397
Query: 321 CSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDV 380
CSH G VEEG F ++++E + P +KHYGC++D+LGRAG LE A +P + D
Sbjct: 398 CSHSGFVEEGKWCF-RLMQEYGIKPSLKHYGCMVDLLGRAGYLEMAYDFIKDMPLQ-PDA 455
Query: 381 VVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVM 440
+W LLGAC HGN+E+G+ + ++ E++ G YVL+ NI A VG++ +++R +
Sbjct: 456 SIWGALLGACRIHGNIELGKFASDRLFEVDSKNVGYYVLLSNIYANVGKWEGVDKVRSLA 515
Query: 441 DERNAFKVPGCSLV 454
ER K PG S +
Sbjct: 516 RERGLKKTPGWSTI 529
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 104/404 (25%), Positives = 187/404 (46%), Gaps = 61/404 (15%)
Query: 96 LHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGE 155
LHA++ G ++++T LVN+Y +LG + S FD++P++++ WN MI+ V G
Sbjct: 38 LHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYAWNSMISAYVHNGH 97
Query: 156 LEFARSLFEEM------------------PC------RNVVSW-------------TGII 178
A F ++ C R + W +I
Sbjct: 98 FHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLVDGRKIHCWAFKLGFQWNVFVAASLI 157
Query: 179 DGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSC----QLIHGYGE 234
Y+R + A +LF M + + A++ + QNG+ + G
Sbjct: 158 HMYSRFGFTGIARSLFDDMPFRDMGSWN-----AMISGLIQNGNAAQALDVLDEMRLEGI 212
Query: 235 KRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKE 294
K F + +L +D YAK G + SA K+FE I V K+++SW ++I+G+A +G+ E
Sbjct: 213 KMNFVTV-VSILPVFVDMYAKLGLLDSAHKVFEIIPV--KDVISWNTLITGYAQNGLASE 269
Query: 295 AVENFGRMQKVG-LKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCL 353
A+E + M++ + PN+ T++S+L A +H G +++G+ ++++ L D+ CL
Sbjct: 270 AIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMKIHGRVIKTNLHL-DVFVATCL 328
Query: 354 IDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGY 413
ID+ G+ GRL A +P E + V W ++ HG+ E ++ ++L + G
Sbjct: 329 IDVYGKCGRLVDAMSLFYQVPQESS--VTWNAIISCHGIHGHAEKTLKLFGEML--DEGV 384
Query: 414 GGDYVLMYNILAGVGRFGDAERLR---RVMDE---RNAFKVPGC 451
D+V ++L+ G E + R+M E + + K GC
Sbjct: 385 KPDHVTFVSLLSACSHSGFVEEGKWCFRLMQEYGIKPSLKHYGC 428
>gi|356565111|ref|XP_003550788.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Glycine max]
Length = 478
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 161/438 (36%), Positives = 244/438 (55%), Gaps = 29/438 (6%)
Query: 31 SQLFNTLLHFYSLAESPQKAFLLYKQLQQIYTH-SHSPLPPLFDSFTYSFLIRTCATLSH 89
+ ++N ++ Y+ + +P KA + YTH S P D FT+S L+ CA
Sbjct: 6 TTVWNHVIRGYARSHTPWKAV-------ECYTHMVSSKAEP--DGFTHSSLLSACARGGL 56
Query: 90 PNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITG 149
G Q+HA + G+ S+V+V+T+L+ Y G ++ + +FD MP+R++V+WN M+ G
Sbjct: 57 VKEGEQVHATVLVKGYCSNVFVDTSLITFYAGRGGVERARHVFDGMPQRSVVSWNSMLAG 116
Query: 150 LVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKM-VACEYTEPSEI 208
V+ + + AR +F+ MPCRNVVSWT ++ G R +S +AL LF +M AC E ++
Sbjct: 117 YVRCADFDGARRVFDVMPCRNVVSWTTMVAGCARNGKSRQALLLFGEMRRAC--VELDQV 174
Query: 209 TILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFD-----IRVLNCLIDTYAKCGCIFSAS 263
++A L A + GD+K + IH Y ++R F A + +R+ N LI YA CG + A
Sbjct: 175 ALVAALSACAELGDLKLGRWIHWYVQQR-FVARNWQQPSVRLNNALIHMYASCGILHEAY 233
Query: 264 KLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLK-----PNRVTFLSVL 318
++F + + RK+ VSWTS+I FA G+GKEA++ F M G+K P+ +TF+ VL
Sbjct: 234 QVF--VKMPRKSTVSWTSMIMAFAKQGLGKEALDLFKTMLSDGVKVDGVRPDEITFIGVL 291
Query: 319 NACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEIT 378
ACSH G V+EG F M + P I+HYGC++D+L RAG L++A +P
Sbjct: 292 CACSHAGFVDEGHQIFASMKHTWGISPSIEHYGCMVDLLSRAGLLDEARGLIETMPLNPN 351
Query: 379 DVVVWRTLLGACSFHGNVEMGERVTRKILEMERG--YGGDYVLMYNILAGVGRFGDAERL 436
D +W LLG C H N E+ +V K++ G G VL+ NI A R+ D +
Sbjct: 352 D-AIWGALLGGCRIHRNSELASQVENKLVPELNGDQAAGYLVLLSNIYAFGQRWQDVITV 410
Query: 437 RRVMDERNAFKVPGCSLV 454
R+ M E K PG S +
Sbjct: 411 RQKMIEMGVKKPPGRSWI 428
>gi|224133790|ref|XP_002327681.1| predicted protein [Populus trichocarpa]
gi|222836766|gb|EEE75159.1| predicted protein [Populus trichocarpa]
Length = 654
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 148/425 (34%), Positives = 239/425 (56%), Gaps = 16/425 (3%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNL 92
L+N L+ Y + E +++ Y +++ + P+ SFT++ L + C L
Sbjct: 113 LYNALIRGYLIEERLKESTEFYSLMRK------EGVVPV--SFTFTALFKACGAKMDVGL 164
Query: 93 GTQLHA-VISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLV 151
G Q+H I GF ++V ++++MY+ GFL+ K+FDEMP R++++W +I+ V
Sbjct: 165 GRQIHGQTILVGGFGEDLHVGNSMIDMYIKCGFLECGRKVFDEMPNRDVISWTELISAYV 224
Query: 152 KWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEY-TEPSEITI 210
K G +E A LF+ +P +++V+WT ++ G+ + + EA+ F KM E+ E EIT+
Sbjct: 225 KSGNMESAGELFDGLPVKDMVAWTVMVSGFAQNAKPREAIMFFEKMQ--EFGVETDEITL 282
Query: 211 LAVLPAIWQNGDVKSCQLIHGYGEKRGFTA-FDIRVLNCLIDTYAKCGCIFSASKLFEDI 269
+ V+ A Q G K I EK F + V + LID Y+KCG + A ++F+
Sbjct: 283 IGVISACAQLGAAKYADWIRDVAEKSEFGGKHSVVVGSALIDMYSKCGSVGDAYRVFQ-- 340
Query: 270 SVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEE 329
++ +N+ S++S+I GFAMHG +A++ F M K +KPNRVTF+ VL ACSH G+VE+
Sbjct: 341 GMKERNVYSYSSMILGFAMHGRVHDAMKLFDEMVKTEIKPNRVTFIGVLTACSHAGMVEQ 400
Query: 330 GLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGA 389
G F+ M + + P HY C++D+LGRAGRL++A + +P E VW LLGA
Sbjct: 401 GWQIFELMEKCYGIKPSADHYTCMVDLLGRAGRLQEAHELVKTMPIE-PHGGVWGALLGA 459
Query: 390 CSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVP 449
C H + ++ + E+E G+Y+L+ NI A GR+ D +R++M R K P
Sbjct: 460 CRIHKSPDIAAIAANHLFELEPYCIGNYILLANIYASCGRWNDVSTVRKLMRTRGLRKNP 519
Query: 450 GCSLV 454
S +
Sbjct: 520 AFSWI 524
Score = 42.7 bits (99), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 55/127 (43%), Gaps = 2/127 (1%)
Query: 271 VERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEG 330
V N + ++I G+ + KE+ E + M+K G+ P TF ++ AC V G
Sbjct: 106 VNYPNPFLYNALIRGYLIEERLKESTEFYSLMRKEGVVPVSFTFTALFKACGAKMDVGLG 165
Query: 331 LNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGAC 390
+ + D+ +IDM + G LE K +P+ DV+ W L+ A
Sbjct: 166 RQIHGQTILVGGFGEDLHVGNSMIDMYIKCGFLECGRKVFDEMPNR--DVISWTELISAY 223
Query: 391 SFHGNVE 397
GN+E
Sbjct: 224 VKSGNME 230
>gi|356569774|ref|XP_003553071.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 775
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 134/375 (35%), Positives = 227/375 (60%), Gaps = 6/375 (1%)
Query: 81 IRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPER-N 139
+ C+ + + +G +H + KVG + +V + AL+++Y S G + D+ ++FD+ E +
Sbjct: 277 LSACSRVLNVEMGRWVHGLAVKVGVEDYVSLKNALIHLYSSCGEIVDARRIFDDGGELLD 336
Query: 140 LVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVA 199
L++WN MI+G ++ G ++ A LF MP ++VVSW+ +I GY + +EALALF++M
Sbjct: 337 LISWNSMISGYLRCGSIQDAEMLFYSMPEKDVVSWSAMISGYAQHECFSEALALFQEM-Q 395
Query: 200 CEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCI 259
P E +++ + A + + IH Y R ++ + LID Y KCGC+
Sbjct: 396 LHGVRPDETALVSAISACTHLATLDLGKWIHAY-ISRNKLQVNVILSTTLIDMYMKCGCV 454
Query: 260 FSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLN 319
+A ++F ++E K + +W ++I G AM+G ++++ F M+K G PN +TF+ VL
Sbjct: 455 ENALEVF--YAMEEKGVSTWNAVILGLAMNGSVEQSLNMFADMKKTGTVPNEITFMGVLG 512
Query: 320 ACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITD 379
AC H GLV +G ++F+ M+ E ++ +IKHYGC++D+LGRAG L++AE+ +P D
Sbjct: 513 ACRHMGLVNDGRHYFNSMIHEHKIEANIKHYGCMVDLLGRAGLLKEAEELIDSMPMA-PD 571
Query: 380 VVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRV 439
V W LLGAC H + EMGER+ RK+++++ + G +VL+ NI A G +G+ +R +
Sbjct: 572 VATWGALLGACRKHRDNEMGERLGRKLIQLQPDHDGFHVLLSNIYASKGNWGNVLEIRGI 631
Query: 440 MDERNAFKVPGCSLV 454
M + K PGCS++
Sbjct: 632 MAQHGVVKTPGCSMI 646
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 122/453 (26%), Positives = 203/453 (44%), Gaps = 84/453 (18%)
Query: 10 PNNITTQIHSHLLTTNSLLHHSQLFNTLL--HFYSLAESPQKAFLLYKQLQQIYTHSHSP 67
P + + +I +HL N+ +NT++ H Y L SP +A L YK ++ SH+
Sbjct: 53 PFHYSLRIFNHLRNPNTFT-----WNTIMRAHLY-LQNSPHQALLHYK----LFLASHAK 102
Query: 68 LPPLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKD 127
P DS+TY L++ CA G QLHA GF VYV L+N+Y G +
Sbjct: 103 --P--DSYTYPILLQCCAARVSEFEGRQLHAHAVSSGFDGDVYVRNTLMNLYAVCGSVGS 158
Query: 128 SSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRN----------------- 170
+ ++F+E P +LV+WN ++ G V+ GE+E A +FE MP RN
Sbjct: 159 ARRVFEESPVLDLVSWNTLLAGYVQAGEVEEAERVFEGMPERNTIASNSMIALFGRKGCV 218
Query: 171 ----------------VVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVL 214
+VSW+ ++ Y + EAL LF +M + + A L
Sbjct: 219 EKARRIFNGVRGRERDMVSWSAMVSCYEQNEMGEEALVLFVEMKGSGVAVDEVVVVSA-L 277
Query: 215 PAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFED------ 268
A + +V+ + +HG K G + + + N LI Y+ CG I A ++F+D
Sbjct: 278 SACSRVLNVEMGRWVHGLAVKVGVEDY-VSLKNALIHLYSSCGEIVDARRIFDDGGELLD 336
Query: 269 ------------------------ISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQK 304
S+ K++VSW+++ISG+A H EA+ F MQ
Sbjct: 337 LISWNSMISGYLRCGSIQDAEMLFYSMPEKDVVSWSAMISGYAQHECFSEALALFQEMQL 396
Query: 305 VGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLE 364
G++P+ +S ++AC+H ++ G + + ++ ++ LIDM + G +E
Sbjct: 397 HGVRPDETALVSAISACTHLATLDLG-KWIHAYISRNKLQVNVILSTTLIDMYMKCGCVE 455
Query: 365 QAEKTALGIPSEITDVVVWRTLLGACSFHGNVE 397
A + + E V W ++ + +G+VE
Sbjct: 456 NALEVFYAM--EEKGVSTWNAVILGLAMNGSVE 486
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 78/325 (24%), Positives = 132/325 (40%), Gaps = 43/325 (13%)
Query: 133 DEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALA 192
D L+ ++ T LV + ++ +F + N +W I+ + + S
Sbjct: 34 DPYAASRLINFSSHSTTLVPF---HYSLRIFNHLRNPNTFTWNTIMRAHLYLQNSPHQAL 90
Query: 193 LFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDT 252
L K+ + +P T +L + +H + GF D+ V N L++
Sbjct: 91 LHYKLFLASHAKPDSYTYPILLQCCAARVSEFEGRQLHAHAVSSGFDG-DVYVRNTLMNL 149
Query: 253 YAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRV 312
YA CG + SA ++FE+ V +LVSW ++++G+ G +EA F M + N +
Sbjct: 150 YAVCGSVGSARRVFEESPV--LDLVSWNTLLAGYVQAGEVEEAERVFEGMPE----RNTI 203
Query: 313 TFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALG 372
S++ G VE+ F+ + G DM+ + + E+ +G
Sbjct: 204 ASNSMIALFGRKGCVEKARRIFNGV------------RGRERDMVSWSAMVSCYEQNEMG 251
Query: 373 IPSEITDV-----------VVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMY 421
+ + V VV + L ACS NVEMG V L ++ G DYV +
Sbjct: 252 EEALVLFVEMKGSGVAVDEVVVVSALSACSRVLNVEMGRWVHG--LAVKVGV-EDYVSLK 308
Query: 422 NIL----AGVGRFGDAERLRRVMDE 442
N L + G DA RR+ D+
Sbjct: 309 NALIHLYSSCGEIVDA---RRIFDD 330
>gi|297815228|ref|XP_002875497.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321335|gb|EFH51756.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 629
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 153/490 (31%), Positives = 251/490 (51%), Gaps = 81/490 (16%)
Query: 32 QLFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPN 91
L N+L+ ++L P +AF ++ ++Q+ + D+FTY FL++ C+ LS
Sbjct: 83 HLCNSLIRAHALNSQPYQAFFVFSEMQRFGLFA--------DNFTYPFLLKACSGLSWLP 134
Query: 92 LGTQLHAVISKVGFQSHVYVNTALVNMY-------------------------------- 119
+ +H I K+G S +YV AL++ Y
Sbjct: 135 VVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGG 194
Query: 120 -VSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGII 178
V G L+D+ KLFDEMP+R+L++WN M+ G + E+ A LFE+MP RN VSW+ ++
Sbjct: 195 LVKAGELRDARKLFDEMPQRDLISWNTMLDGYARCREMSRAFELFEKMPERNTVSWSTMV 254
Query: 179 DGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSC-----QLIHG-- 231
GY++ A +F KM + + +T ++ + G +K Q++
Sbjct: 255 MGYSKAGDMEMARVMFDKM---PFPAKNVVTWTIIIAGYAEKGLLKEADKLVDQMVASGL 311
Query: 232 ------------YGEKRGFTAFDIR---------------VLNCLIDTYAKCGCIFSASK 264
+ G + +R VLN L+D YAKCG + A
Sbjct: 312 RFDAAAAISILAACAESGLLSLGMRAHSIIKKSNLNSNASVLNALLDMYAKCGSLKKAFD 371
Query: 265 LFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHG 324
+F D+ +K+LVSW +++ G +HG GKEA+E F RM+K G+ P++VTF++VL +C+H
Sbjct: 372 VFNDMP--KKDLVSWNTMLHGLGVHGHGKEAIELFSRMRKEGIWPDKVTFIAVLCSCNHA 429
Query: 325 GLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWR 384
GL++EG+++F M + +++P ++HYGCL+D+LGR GRL++A K +P E +VV+W
Sbjct: 430 GLIDEGIDYFYSMEKVYDLVPKVEHYGCLVDLLGRGGRLKEAIKVVQTMPME-PNVVIWG 488
Query: 385 TLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERN 444
LLGAC H V++ + V +++++ G+Y L+ NI A + +R M
Sbjct: 489 ALLGACRMHNEVDIAKEVLDNLVKLDPSDPGNYTLLSNIYAAAEDWEGVADIRSKMKSMG 548
Query: 445 AFKVPGCSLV 454
K G S V
Sbjct: 549 VEKPSGASSV 558
Score = 42.0 bits (97), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 89/214 (41%), Gaps = 28/214 (13%)
Query: 242 DIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGR 301
D+ + LI + C A ++F V+ N+ S+I A++ +A F
Sbjct: 50 DLHIAPKLISALSLCRQTNLALRVFN--QVQEPNVHLCNSLIRAHALNSQPYQAFFVFSE 107
Query: 302 MQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFD--KM----VEECEVLPDIKHYGCLID 355
MQ+ GL + T+ +L ACS GL++ KM +E+ + DI LID
Sbjct: 108 MQRFGLFADNFTYPFLLKACS-------GLSWLPVVKMMHNHIEKLGLSSDIYVPNALID 160
Query: 356 MLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGE-RVTRKIL-EMERGY 413
R G L + L D V W ++LG G V+ GE R RK+ EM +
Sbjct: 161 CYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLG-----GLVKAGELRDARKLFDEMPQ-- 213
Query: 414 GGDYVLMYNILAGVGRFGDAER---LRRVMDERN 444
D + +L G R + R L M ERN
Sbjct: 214 -RDLISWNTMLDGYARCREMSRAFELFEKMPERN 246
>gi|255586940|ref|XP_002534070.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223525897|gb|EEF28314.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 533
Score = 263 bits (672), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 147/421 (34%), Positives = 243/421 (57%), Gaps = 12/421 (2%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+NT++ +S + PQ + LY + + T SP+ P TY + + A L + G
Sbjct: 89 WNTIIRGFSRSSVPQNSISLY--IDMLLT---SPVQP--QRLTYPSVFKAFAQLDLASEG 141
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
QLH + K+G ++ ++ ++ MYV+ GF ++ K+FD + ++V WN MI G+ K
Sbjct: 142 AQLHGKMIKLGLENDSFIRNTILFMYVNCGFTSEARKVFDRGMDFDIVAWNTMIMGVAKC 201
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
G ++ +R LF++M RN VSW +I GY R R +AL LF+KM E EPSE T++++
Sbjct: 202 GLVDESRRLFDKMSLRNAVSWNSMISGYVRNGRFFDALELFQKM-QVERIEPSEFTMVSL 260
Query: 214 LPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVER 273
L A G ++ + IH Y K+ F I V+ +ID Y+KCG I A ++F+ S R
Sbjct: 261 LNACACLGAIRQGEWIHDYMVKKKFELNPI-VVTAIIDMYSKCGSIDKAVQVFQ--SAPR 317
Query: 274 KNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNF 333
+ L W S+I G AM+G EA++ F +Q L+P+ V+F++VL AC H G+V++ ++
Sbjct: 318 RGLSCWNSMILGLAMNGQENEALQLFSVLQSSDLRPDDVSFIAVLTACDHTGMVDKAKDY 377
Query: 334 FDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFH 393
F M ++ ++ P IKH+ C++D+LGRAG LE+AE+ + + D ++W +LL +C +
Sbjct: 378 FLLMRDKYKIKPGIKHFSCMVDVLGRAGLLEEAEELIRSMHVD-PDAIIWGSLLWSCCKY 436
Query: 394 GNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSL 453
GN++M +R ++E+ +VL+ N A F +A + R + E + K PGCS
Sbjct: 437 GNIKMAKRAANHLIELNPSESSSFVLVANAYAAANNFEEALKERLTLKENHIGKEPGCSC 496
Query: 454 V 454
+
Sbjct: 497 I 497
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 85/347 (24%), Positives = 158/347 (45%), Gaps = 38/347 (10%)
Query: 68 LPP-------LFDSFTY-SFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMY 119
LPP L TY S L + C T+ ++H+ + K G + ++
Sbjct: 8 LPPSPATISKLISDQTYLSMLDKNCTTMKDLK---KIHSQLIKTGLAKDTNAASRILAFC 64
Query: 120 VS-LGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEM-------PCRNV 171
S G + + +F ++ N+ WN +I G + + + SL+ +M P R
Sbjct: 65 ASPAGDINYAYLVFVQIQNPNIFAWNTIIRGFSRSSVPQNSISLYIDMLLTSPVQPQR-- 122
Query: 172 VSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEI--TILAVLPAIWQNGDVKSCQLI 229
+++ + + +++ ++E L KM+ S I TIL + + +
Sbjct: 123 LTYPSVFKAFAQLDLASEGAQLHGKMIKLGLENDSFIRNTILFMYVNCGFTSEARKVF-- 180
Query: 230 HGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMH 289
RG FDI N +I AKCG + + +LF+ +S+ +N VSW S+ISG+ +
Sbjct: 181 -----DRGMD-FDIVAWNTMIMGVAKCGLVDESRRLFDKMSL--RNAVSWNSMISGYVRN 232
Query: 290 GMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMV-EECEVLPDIK 348
G +A+E F +MQ ++P+ T +S+LNAC+ G + +G D MV ++ E+ P +
Sbjct: 233 GRFFDALELFQKMQVERIEPSEFTMVSLLNACACLGAIRQGEWIHDYMVKKKFELNPIV- 291
Query: 349 HYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGN 395
+IDM + G +++A + P + W +++ + +G
Sbjct: 292 -VTAIIDMYSKCGSIDKAVQVFQSAPRR--GLSCWNSMILGLAMNGQ 335
>gi|357143748|ref|XP_003573036.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05750,
chloroplastic-like [Brachypodium distachyon]
Length = 484
Score = 263 bits (672), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 150/394 (38%), Positives = 232/394 (58%), Gaps = 14/394 (3%)
Query: 67 PLPPLFDSFTYSFLIRTCA-----TLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVS 121
P P + T ++ CA L+ P L LHA+ K+ F ++ + T L Y++
Sbjct: 61 PAAPPPNDVTLLTVLSACAGDSSSALARP-LALSLHALAVKL-FPCNLLLCTCLARFYLA 118
Query: 122 LGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGY 181
+ KLFD MP+R++VT+N MITGL++ G + AR +F+EMP + VSWT +IDG
Sbjct: 119 SRLPHLAIKLFDSMPDRSVVTYNTMITGLMRNGLVAAAREVFDEMPAPDKVSWTALIDGC 178
Query: 182 TRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYG-EKRGFTA 240
+ R +EA+ F M+ + EP +T++A + A + G + +H + +KR
Sbjct: 179 VKNGRHDEAIDCFHSMLR-DGVEPDYVTLVAAISACAEVGALGLGMWVHRFVVDKR--LE 235
Query: 241 FDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFG 300
++RV N LID YA+CG + A ++F I ++ +VSW S+I GFA +G +AVE+F
Sbjct: 236 HNVRVANSLIDMYARCGQVDFARQVFGRI--RKRTVVSWNSMIVGFAANGQYADAVEHFE 293
Query: 301 RMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRA 360
M++ G KP+ VTF VL ACSH GL +EGL ++D M E + ++HYGC++D+LGRA
Sbjct: 294 AMRREGFKPDTVTFTGVLTACSHAGLTDEGLRYYDAMRTEHGIAARMEHYGCVVDLLGRA 353
Query: 361 GRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLM 420
GRL +A + +P +VV+ LL C HG+V++ E++ + +LE + G +YVL+
Sbjct: 354 GRLGEAMRVVESMPMRPNEVVLG-ALLAGCRMHGDVDLAEQLMQHLLEQDPGGDSNYVLL 412
Query: 421 YNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
NI A VG++G A ++R +M R K PG S V
Sbjct: 413 SNIYAAVGKWGGAGKVRSLMKSRGVKKRPGQSTV 446
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 74/309 (23%), Positives = 129/309 (41%), Gaps = 45/309 (14%)
Query: 159 ARSLFEEMPCRNVVSWTGIIDGYTRM-NRSNEALALFRKMVACEYTEPSEITILAVLPAI 217
A S +P R+VVSWT I R + A AL + + P+++T+L VL A
Sbjct: 19 ATSKPRRLPPRDVVSWTSAIARPAREGDLQGAAAALSAMLSSPAAPPPNDVTLLTVLSAC 78
Query: 218 WQNGDVKS-------------------CQLIHGYGEKRGFTA----------FD------ 242
GD S C L+ R + A FD
Sbjct: 79 --AGDSSSALARPLALSLHALAVKLFPCNLLLCTCLARFYLASRLPHLAIKLFDSMPDRS 136
Query: 243 IRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRM 302
+ N +I + G + +A ++F+++ K VSWT++I G +G EA++ F M
Sbjct: 137 VVTYNTMITGLMRNGLVAAAREVFDEMPAPDK--VSWTALIDGCVKNGRHDEAIDCFHSM 194
Query: 303 QKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGR 362
+ G++P+ VT ++ ++AC+ G + G+ + + V + + +++ LIDM R G+
Sbjct: 195 LRDGVEPDYVTLVAAISACAEVGALGLGM-WVHRFVVDKRLEHNVRVANSLIDMYARCGQ 253
Query: 363 LEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYN 422
++ A + I VV W +++ F N + + V G+ D V
Sbjct: 254 VDFARQVFGRIRKRT--VVSWNSMI--VGFAANGQYADAVEHFEAMRREGFKPDTVTFTG 309
Query: 423 ILAGVGRFG 431
+L G
Sbjct: 310 VLTACSHAG 318
>gi|356502600|ref|XP_003520106.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g20540-like [Glycine max]
Length = 518
Score = 263 bits (672), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 142/394 (36%), Positives = 221/394 (56%), Gaps = 11/394 (2%)
Query: 65 HSPLPPLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGF 124
H+ L P D++T ++++ CA L +LG +H SK+G ++V +L+ MY G
Sbjct: 98 HNGLGP--DNYTIPYVLKACAALRDCSLGKMVHGYSSKLGLVFDIFVGNSLMAMYSVCGD 155
Query: 125 LKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRM 184
+ + +FDEMP + V+W+VMI+G K G+++ AR F+E P ++ W +I GY +
Sbjct: 156 VIAARHVFDEMPRLSAVSWSVMISGYAKVGDVDSARLFFDEAPEKDRGIWGAMISGYVQN 215
Query: 185 NRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIR 244
+ E L LFR ++ + P E +++L A G + IH Y R + IR
Sbjct: 216 SCFKEGLYLFR-LLQLTHVVPDESIFVSILSACAHLGALDIGIWIHRY-LNRKTVSLSIR 273
Query: 245 VLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQK 304
+ L+D YAKCG + A +LF+ S+ +++V W ++ISG AMHG G A++ F M+K
Sbjct: 274 LSTSLLDMYAKCGNLELAKRLFD--SMPERDIVCWNAMISGLAMHGDGASALKMFSEMEK 331
Query: 305 VGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLE 364
G+KP+ +TF++V ACS+ G+ EGL DKM E+ P +HYGCL+D+L RAG
Sbjct: 332 TGIKPDDITFIAVFTACSYSGMAHEGLQLLDKMSSLYEIEPKSEHYGCLVDLLSRAGLFG 391
Query: 365 QAEKTALGIPSE----ITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLM 420
+A I S + + WR L AC HG ++ ER +++L +E + G YVL+
Sbjct: 392 EAMVMIRRITSTSWNGSEETLAWRAFLSACCNHGQAQLAERAAKRLLRLEN-HSGVYVLL 450
Query: 421 YNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
N+ A G+ DA R+R +M + K PGCS V
Sbjct: 451 SNLYAASGKHSDARRVRNMMRNKGVDKAPGCSSV 484
>gi|224060371|ref|XP_002300166.1| predicted protein [Populus trichocarpa]
gi|222847424|gb|EEE84971.1| predicted protein [Populus trichocarpa]
Length = 719
Score = 263 bits (672), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 161/501 (32%), Positives = 263/501 (52%), Gaps = 64/501 (12%)
Query: 3 ILQNSQTPNNITTQIHSHLLTTNSLLHHSQLFNTLLHFYSLAESPQKAFLLYKQLQQIYT 62
I+ N + + ITTQ+ S S+ H +FN P+ F ++ + T
Sbjct: 105 IIHNLSSSSLITTQLISSSSLRKSINHSLAVFNH--------HKPKNLFTFNALIRGLTT 156
Query: 63 HSH-------------SPLPPLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHV 109
+SH S + P D TY F++++ A L LG +H +I + G +
Sbjct: 157 NSHFFNAIFHFRLMLRSGIKP--DRLTYPFVLKSMAGLFSTELGMAIHCMILRCGIELDS 214
Query: 110 YVNTALVNMYVSL------------------------------------GFLKDSSKLFD 133
+V +LV+MYV + G +K + KLF
Sbjct: 215 FVRVSLVDMYVKVEKLGSAFKVFDESPERFDSGSSALLWNVLIKGCCKAGSMKKAVKLFK 274
Query: 134 EMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALAL 193
MP++ V+W+ +I G K G+++ A LF++MP +NVVSWT ++DG++R S +AL++
Sbjct: 275 AMPKKENVSWSTLIDGFAKNGDMDRAMELFDQMPEKNVVSWTTMVDGFSRNGDSEKALSM 334
Query: 194 FRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTY 253
F KM+ E P+ TI++ L A + G +++ IH Y + G + + L+D Y
Sbjct: 335 FSKMLE-EGVRPNAFTIVSALSACAKIGGLEAGLRIHKYIKDNGLHLTEA-LGTALVDMY 392
Query: 254 AKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVT 313
AKCG I SAS++F + E+K++ +WT +I G+A+HG ++A+ F +M G+KP+ V
Sbjct: 393 AKCGNIESASEVFGE--TEQKSIRTWTVMIWGWAIHGHSEQAIACFKQMMFAGIKPDEVV 450
Query: 314 FLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGI 373
FL++L AC H G V+ GLNFFD M + + P +KHY ++DMLGR+G+L++A + +
Sbjct: 451 FLALLTACMHSGQVDIGLNFFDSMRLDYCIEPSMKHYTLIVDMLGRSGQLKEALRFIERM 510
Query: 374 PSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDA 433
P D V+W L AC H +M + K+L++E + G+Y+ + N A +G++ DA
Sbjct: 511 PMN-PDFVIWGALFCACRAHKKTKMAKFALNKLLKLEPTHTGNYIFLSNAYAALGQWEDA 569
Query: 434 ERLRRVMDERNAFKVPGCSLV 454
ER+R +M R K G S +
Sbjct: 570 ERVRVLMQNRGVHKNSGWSCI 590
>gi|147806246|emb|CAN72195.1| hypothetical protein VITISV_014979 [Vitis vinifera]
Length = 558
Score = 263 bits (672), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 141/382 (36%), Positives = 220/382 (57%), Gaps = 38/382 (9%)
Query: 73 DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLF 132
D FT+ F+++ CA L G LH+++ K+GF S VYV L++ Y GFL
Sbjct: 86 DHFTFPFVLKACARL---QTGLDLHSLLFKLGFDSDVYVQNGLIHFYGCCGFL------- 135
Query: 133 DEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALA 192
+FA FEEMP R++VSW+ +I + + EALA
Sbjct: 136 ------------------------DFALKAFEEMPERDLVSWSSMIACFAKNGFGYEALA 171
Query: 193 LFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDT 252
LF++M +P E+ +L+V+ AI GD++ + I G+ + G F + + L+D
Sbjct: 172 LFQRMQLVGTVKPDEVIVLSVVSAISILGDLELGKWIRGFISRNGLE-FTVSLGTALVDM 230
Query: 253 YAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRV 312
+++CGCI + ++F+++ +N+++WT++I+G A+HG EA+ F M+ G +P+ V
Sbjct: 231 FSRCGCIEESMRVFDEMG--ERNVLTWTALINGLAVHGRSAEALRMFYEMRNHGFQPDHV 288
Query: 313 TFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALG 372
TF VL ACSHGGLV EG + F+ + E + P +HYGC++D+LGRAG L +A K G
Sbjct: 289 TFTGVLVACSHGGLVSEGWHVFESIRNEYGMEPLPEHYGCMVDLLGRAGLLNEACKFVDG 348
Query: 373 IPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGD 432
+P + ++WRTLLGAC H +E+ E+V KI E++ + GDYVL+ N+ GVGR+ +
Sbjct: 349 MPIR-PNSIIWRTLLGACVNHNYIELAEKVKEKINELDSYHDGDYVLLSNVYGGVGRWAE 407
Query: 433 AERLRRVMDERNAFKVPGCSLV 454
+R M E+ K PGCSL+
Sbjct: 408 KAGVRNSMREKRISKKPGCSLI 429
>gi|297721835|ref|NP_001173281.1| Os03g0169300 [Oryza sativa Japonica Group]
gi|19071631|gb|AAL84298.1|AC073556_15 putative pentatricopeptide repeat containing protein [Oryza sativa
Japonica Group]
gi|108706397|gb|ABF94192.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|125585070|gb|EAZ25734.1| hypothetical protein OsJ_09569 [Oryza sativa Japonica Group]
gi|215769145|dbj|BAH01374.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255674238|dbj|BAH92009.1| Os03g0169300 [Oryza sativa Japonica Group]
Length = 510
Score = 263 bits (672), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 150/391 (38%), Positives = 236/391 (60%), Gaps = 21/391 (5%)
Query: 73 DSFTYSFLIRTCAT-LSHPNLGTQLHAVISKVGF----QSHVYVNTALVNMYVSLGFLKD 127
D+FT++F +++C+ +S L + LHA K G SHV+V+ AL++ Y S + D
Sbjct: 120 DAFTFTFALKSCSRCVSQRRLPSDLHAQAIKHGCLGAGSSHVHVHNALLHGYSSRAAVGD 179
Query: 128 SSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRS 187
+ ++FDEMP R++++++ ++T +K +L+ AR +F++MP R+VVSWT +I Y R R
Sbjct: 180 ARRVFDEMPARDVISFSGLLTLHLKANDLDAARVVFDQMPHRDVVSWTAMISAYARARRP 239
Query: 188 NEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLN 247
EALALF M +P E+T+L+V+ A GD+ + + + Y + GF + + + N
Sbjct: 240 QEALALFDAMP----VQPDEVTMLSVVSACTALGDLATGERVCQYVDSNGF-GWMVSLRN 294
Query: 248 CLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVG- 306
L+D YAKCG + A LF+ ++V ++L SW + IS +A HG + V F RM G
Sbjct: 295 ALMDMYAKCGSLTEARNLFDGMTV--RSLASWNTFISAYASHGDVESTVALFHRMLADGK 352
Query: 307 -LKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEE--CEVLPDIKHYGCLIDMLGRAGRL 363
+KP+ T L+VL A +H G VEEG F+ ++ +V I+HYGC++D+LGRAG+L
Sbjct: 353 SVKPDGTTLLAVLTAYAHKGFVEEGRAMFNAILSGNYGKVDLTIEHYGCMVDLLGRAGQL 412
Query: 364 EQAEKT--ALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMY 421
E+A K + IPS + VVW LLGAC HG++ M ER +K+ + GG Y+L+
Sbjct: 413 EEAYKMIEQMPIPS---NSVVWGALLGACRTHGDINMAERAVQKLRSLNPEEGGYYILLS 469
Query: 422 NILAGVGRFGDAERLRRVMDERNAFKVPGCS 452
++ A GR +A +RR+M++ A K G S
Sbjct: 470 DMYAASGRTTEAMEIRRIMNQAGARKTAGQS 500
>gi|5262797|emb|CAB45902.1| putative protein (fragment) [Arabidopsis thaliana]
gi|7268904|emb|CAB79107.1| putative protein (fragment) [Arabidopsis thaliana]
Length = 1495
Score = 263 bits (672), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 149/423 (35%), Positives = 245/423 (57%), Gaps = 44/423 (10%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNL 92
++NTL+ Y+ + AF LY++++ + P D+ TY FLI+ T++ L
Sbjct: 87 IWNTLIRGYAEIGNSISAFSLYREMR-----VSGLVEP--DTHTYPFLIKAVTTMADVRL 139
Query: 93 GTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVK 152
G +H+V+ + GF S +YV +L+++Y + G + + K+FD+MPE++LV WN +I G +
Sbjct: 140 GETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAE 199
Query: 153 WGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILA 212
G+ E A +L+ EM + + +P TI++
Sbjct: 200 NGKPEEALALYTEMNSKGI--------------------------------KPDGFTIVS 227
Query: 213 VLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVE 272
+L A + G + + +H Y K G T ++ N L+D YA+CG + A LF+++
Sbjct: 228 LLSACAKIGALTLGKRVHVYMIKVGLTR-NLHSSNVLLDLYARCGRVEEAKTLFDEMV-- 284
Query: 273 RKNLVSWTSIISGFAMHGMGKEAVENFGRMQKV-GLKPNRVTFLSVLNACSHGGLVEEGL 331
KN VSWTS+I G A++G GKEA+E F M+ GL P +TF+ +L ACSH G+V+EG
Sbjct: 285 DKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGF 344
Query: 332 NFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACS 391
+F +M EE ++ P I+H+GC++D+L RAG++++A + +P + +VV+WRTLLGAC+
Sbjct: 345 EYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQ-PNVVIWRTLLGACT 403
Query: 392 FHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGC 451
HG+ ++ E +IL++E + GDYVL+ N+ A R+ D +++R+ M KVPG
Sbjct: 404 VHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGH 463
Query: 452 SLV 454
SLV
Sbjct: 464 SLV 466
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 76/243 (31%), Positives = 125/243 (51%), Gaps = 13/243 (5%)
Query: 156 LEFARSLFE--EMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
+ +A +F E P NV W +I GY + S A +L+R+M EP T +
Sbjct: 69 MSYAHKVFSKIEKPI-NVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFL 127
Query: 214 LPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVER 273
+ A+ DV+ + IH + GF + I V N L+ YA CG + SA K+F+ +
Sbjct: 128 IKAVTTMADVRLGETIHSVVIRSGFGSL-IYVQNSLLHLYANCGDVASAYKVFDKMP--E 184
Query: 274 KNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNF 333
K+LV+W S+I+GFA +G +EA+ + M G+KP+ T +S+L+AC+ G + G
Sbjct: 185 KDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRV 244
Query: 334 FDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITD--VVVWRTLLGACS 391
M+ + + ++ L+D+ R GR+E+A KT E+ D V W +L+ +
Sbjct: 245 HVYMI-KVGLTRNLHSSNVLLDLYARCGRVEEA-KTLF---DEMVDKNSVSWTSLIVGLA 299
Query: 392 FHG 394
+G
Sbjct: 300 VNG 302
>gi|449440989|ref|XP_004138266.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449524140|ref|XP_004169081.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 695
Score = 263 bits (672), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 171/554 (30%), Positives = 274/554 (49%), Gaps = 116/554 (20%)
Query: 3 ILQNSQTPNNITTQIHSHLLTTNSLLH--------------------------------H 30
ILQ +TP ++ Q+H+HLL T LL
Sbjct: 27 ILQQCKTPKDLQ-QVHAHLLKTRRLLDPIITEAVLESAALLLPDTIDYALSIFNHIDKPE 85
Query: 31 SQLFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHP 90
S +N ++ + SP A LL+K++ + D FT+S +++ C+ +
Sbjct: 86 SSAYNVMIRGLAFKRSPDNALLLFKKMHEKSVQH--------DKFTFSSVLKACSRMKAL 137
Query: 91 NLGTQLHAVISKVGFQSH---------VYVN----------------------TALVNMY 119
G Q+HA+I K GF+S+ +Y N ++++ Y
Sbjct: 138 REGEQVHALILKSGFKSNEFVENTLIQMYANCGQIGVARHVFDGMPERSIVAWNSMLSGY 197
Query: 120 VSLGFLKDSSKLFDEMPE-----------------------------------RNLVTWN 144
G + KLF ++ E + L N
Sbjct: 198 TKNGLWDEVVKLFRKILELRIEFDDVTMISVLMACGRLANLEIGELIGEYIVSKGLRRNN 257
Query: 145 VMITGLV----KWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVAC 200
+ T L+ K G+++ AR LF+EM R+VV+W+ +I GY + +R EAL LF +M
Sbjct: 258 TLTTSLIDMYAKCGQVDTARKLFDEMDKRDVVAWSAMISGYAQADRCKEALNLFHEMQKG 317
Query: 201 EYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIF 260
P+E+T+++VL + G ++ + +H Y +K+ + + LID YAKCG I
Sbjct: 318 N-VYPNEVTMVSVLYSCAMLGAYETGKWVHFYIKKKKMK-LTVTLGTQLIDFYAKCGYID 375
Query: 261 SASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNA 320
+ ++F+++S KN+ +WT++I G A +G GK A+E F M + +KPN VTF+ VL+A
Sbjct: 376 RSVEVFKEMSF--KNVFTWTALIQGLANNGEGKMALEFFSSMLENDVKPNDVTFIGVLSA 433
Query: 321 CSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDV 380
CSH LV++G + F+ M + ++ P I+HYGC++D+LGRAG LE+A + +P +
Sbjct: 434 CSHACLVDQGRHLFNSMRRDFDIEPRIEHYGCMVDILGRAGFLEEAYQFIDNMPFP-PNA 492
Query: 381 VVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVM 440
VVWRTLL +C H N+EM E+ I +E + GDY+L+ N A VGR DA R+R ++
Sbjct: 493 VVWRTLLASCRAHKNIEMAEKSLEHITRLEPAHSGDYILLSNTYALVGRVEDAIRVRSLI 552
Query: 441 DERNAFKVPGCSLV 454
E+ K+PGCSL+
Sbjct: 553 KEKEIKKIPGCSLI 566
>gi|297733949|emb|CBI15196.3| unnamed protein product [Vitis vinifera]
Length = 467
Score = 263 bits (672), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 155/429 (36%), Positives = 250/429 (58%), Gaps = 23/429 (5%)
Query: 37 LLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLGTQL 96
++ +S +E+P K LY ++ + + P + FTYSFLI CA G Q+
Sbjct: 1 MIRGHSQSETPHKLVELYNRMVE------AEAEP--NEFTYSFLIGGCARSRLLREGEQV 52
Query: 97 HAVISKVGFQSHVYVNTALVNMYVSLGF---LKDSSKLFDEMPERNLVTWNVMITGLVKW 153
H + G+ ++V+V T+LVN+Y G ++ + ++FDE+ +RN+V+WN ++ G V+
Sbjct: 53 HGRVVANGYCTNVFVRTSLVNLYAIAGGYDGVRKARRVFDEIVDRNIVSWNSLLAGYVRC 112
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
G+++ AR +F+EMP RNVVSWT +I G ++ R +AL LF +M + ++ ++A
Sbjct: 113 GDVDGARRIFDEMPERNVVSWTTMIAGCAQIGRCKQALHLFHEMRRAG-VKLDQVALVAA 171
Query: 214 LPAIWQNGDVKSCQLIHGYGEKR---GFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDIS 270
L A + GD+K IH Y ++R G + + N LI YA CG I A K+F I
Sbjct: 172 LSACAELGDLKLGTWIHSYIDERLHAGNQPLLVSLNNSLIHMYASCGVIDKAYKVF--IG 229
Query: 271 VERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGL---KPNRVTFLSVLNACSHGGLV 327
+++++ +SWTS+I+GFA G +EA+ F MQ++G +P+ +TF+ VL ACSH G V
Sbjct: 230 MQQRSTISWTSMITGFAKQGHAEEALGVFQWMQRLGTDEGRPDGITFIGVLCACSHAGFV 289
Query: 328 EEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLL 387
++G +FF+ M ++ ++P I+HYGC++D+L RAG L++A + +P + D VW LL
Sbjct: 290 DQGRHFFECMNKKWGIVPRIEHYGCMVDLLSRAGFLDEAHRLIESMPMKPND-AVWGALL 348
Query: 388 GACSFHGNVEMGERVTRKI-LEMERGYGGDY-VLMYNILAGVGRFGDAERLRRVMDERNA 445
G C H N E+ V +K+ LE++ Y VL+ N+ A R+ D +R+ M E
Sbjct: 349 GGCRIHKNAELASHVAQKLALELKPDQAAGYLVLLSNVYATAKRWQDVALVRQKMVEIGV 408
Query: 446 FKVPGCSLV 454
K G S V
Sbjct: 409 RKPAGRSWV 417
>gi|297737809|emb|CBI27010.3| unnamed protein product [Vitis vinifera]
Length = 481
Score = 263 bits (672), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 132/340 (38%), Positives = 204/340 (60%), Gaps = 4/340 (1%)
Query: 115 LVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSW 174
+V+ Y+ G + ++ KLF EMP R+++ WN ++ G G +E LFEEMP RN+ SW
Sbjct: 81 MVSGYIEGGDMVEARKLFHEMPNRDVMFWNTVLKGYATNGNVEALEGLFEEMPERNIFSW 140
Query: 175 TGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGE 234
+I GY E L F++M++ P++ T++ VL A + G + + +H Y E
Sbjct: 141 NALIGGYAHNGLFFEVLGSFKRMLSESDVPPNDATLVTVLSACARLGALDLGKWVHVYAE 200
Query: 235 KRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKE 294
G ++ V N L+D YAKCG I +A +F ++ K+L+SW ++I G AMH G +
Sbjct: 201 SSGLKG-NVYVGNALMDMYAKCGIIENAISVFR--GMDTKDLISWNTLIGGLAMHSRGAD 257
Query: 295 AVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLI 354
A+ F +M+ G KP+ +TF+ +L AC+H GLVE+G +F M ++ ++P I+HYGC++
Sbjct: 258 ALNLFFQMKNAGQKPDGITFIGILCACTHMGLVEDGFAYFQSMADDYLIMPQIEHYGCMV 317
Query: 355 DMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYG 414
DML RAGRLEQA +P E D V+W LLGAC + NVE+ E ++++E+E
Sbjct: 318 DMLARAGRLEQAMAFVRKMPVE-ADGVIWAGLLGACRIYKNVELAELALQRLIELEPKNP 376
Query: 415 GDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
+YV++ NI GR+ D RL+ M + K+PGCSL+
Sbjct: 377 ANYVMLSNIYGDAGRWEDVARLKVAMRDTGFKKLPGCSLI 416
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/269 (27%), Positives = 136/269 (50%), Gaps = 23/269 (8%)
Query: 128 SSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRS 187
+ +LFD++P+ N+ WN M G + + E R +F EM RNVV+WT +I+GY
Sbjct: 4 ARQLFDQIPDPNIALWNSMFRG---YAQSESYREIFCEMFERNVVAWTSMINGYILSADL 60
Query: 188 NEALALFRKMVACEYTEPSEITILAVLPAIW-QNGD-VKSCQLIHGYGEKRGFTAFDIRV 245
A LF + ++ + ++ + + + GD V++ +L H + D+
Sbjct: 61 VSARRLF------DLAPERDVVLWNIMVSGYIEGGDMVEARKLFHEMPNR------DVMF 108
Query: 246 LNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRM-QK 304
N ++ YA G + + LFE++ +N+ SW ++I G+A +G+ E + +F RM +
Sbjct: 109 WNTVLKGYATNGNVEALEGLFEEMP--ERNIFSWNALIGGYAHNGLFFEVLGSFKRMLSE 166
Query: 305 VGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLE 364
+ PN T ++VL+AC+ G ++ G + E + ++ L+DM + G +E
Sbjct: 167 SDVPPNDATLVTVLSACARLGALDLG-KWVHVYAESSGLKGNVYVGNALMDMYAKCGIIE 225
Query: 365 QAEKTALGIPSEITDVVVWRTLLGACSFH 393
A G+ ++ D++ W TL+G + H
Sbjct: 226 NAISVFRGMDTK--DLISWNTLIGGLAMH 252
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 68/138 (49%), Gaps = 6/138 (4%)
Query: 64 SHSPLPPLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLG 123
S S +PP + T ++ CA L +LG +H G + +VYV AL++MY G
Sbjct: 165 SESDVPP--NDATLVTVLSACARLGALDLGKWVHVYAESSGLKGNVYVGNALMDMYAKCG 222
Query: 124 FLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCR----NVVSWTGIID 179
++++ +F M ++L++WN +I GL A +LF +M + +++ GI+
Sbjct: 223 IIENAISVFRGMDTKDLISWNTLIGGLAMHSRGADALNLFFQMKNAGQKPDGITFIGILC 282
Query: 180 GYTRMNRSNEALALFRKM 197
T M + A F+ M
Sbjct: 283 ACTHMGLVEDGFAYFQSM 300
>gi|21780142|gb|AAM77644.1|AF517844_1 hypothetical protein [Arabidopsis thaliana]
Length = 603
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 147/422 (34%), Positives = 235/422 (55%), Gaps = 44/422 (10%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNL 92
+FN++ YS +P + F L+ ++ + LP D++T+ L++ CA
Sbjct: 96 IFNSMARGYSRFTNPLEVFSLFVEILE-----DGILP---DNYTFPSLLKACAVAKALEE 147
Query: 93 GTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVK 152
G QLH + K+G +VYV L+NMY + + +FD + E
Sbjct: 148 GRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARXVFDRIVE--------------- 192
Query: 153 WGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILA 212
PC VV + +I GY R NR NEAL+LFR+M +Y +P+EIT+L+
Sbjct: 193 --------------PC--VVCYNAMITGYARRNRPNEALSLFREMQG-KYLKPNEITLLS 235
Query: 213 VLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVE 272
VL + G + + IH Y +K F + ++V LID +AKCG + A +FE +
Sbjct: 236 VLSSCALLGSLDLGKWIHKYAKKHSFCKY-VKVNTALIDMFAKCGSLDDAVSIFE--KMR 292
Query: 273 RKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLN 332
K+ +W+++I +A HG ++++ F RM+ ++P+ +TFL +LNACSH G VEEG
Sbjct: 293 YKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRK 352
Query: 333 FFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSF 392
+F +MV + ++P IKHYG ++D+L AG LE A + +P T ++WR LL ACS
Sbjct: 353 YFSQMVSKFGIVPSIKHYGSMVDLLSXAGNLEDAYEFIDKLPISPTP-MLWRILLAACSS 411
Query: 393 HGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCS 452
H N+++ E+V+ +I E++ +GGDYV++ N+ A ++ + LR+VM +R A KVPGCS
Sbjct: 412 HNNLDLAEKVSERIFELDDSHGGDYVILSNLYARNKKWEYVDSLRKVMKDRKAVKVPGCS 471
Query: 453 LV 454
+
Sbjct: 472 SI 473
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 117/247 (47%), Gaps = 17/247 (6%)
Query: 156 LEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRK-----MVACEYTEPSEITI 210
+ +AR LFE M ++V + + GY+R E +LF + ++ YT PS +
Sbjct: 79 MSYARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKA 138
Query: 211 LAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDIS 270
AV A+ + + +H K G ++ V LI+ Y +C + SA +F+ I
Sbjct: 139 CAVAKALEEG------RQLHCLSMKLGLDD-NVYVCPTLINMYTECEDVDSARXVFDRI- 190
Query: 271 VERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEG 330
VE +V + ++I+G+A EA+ F MQ LKPN +T LSVL++C+ G ++ G
Sbjct: 191 VE-PCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLG 249
Query: 331 LNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGAC 390
+ K ++ +K LIDM + G L+ A ++ D W ++ A
Sbjct: 250 -KWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDA--VSIFEKMRYKDTQAWSAMIVAY 306
Query: 391 SFHGNVE 397
+ HG E
Sbjct: 307 ANHGKAE 313
>gi|449492842|ref|XP_004159118.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g05750, chloroplastic-like [Cucumis sativus]
Length = 525
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 146/386 (37%), Positives = 221/386 (57%), Gaps = 16/386 (4%)
Query: 76 TYSFLIRTCATLSHPNL--GTQLHAVISKVGFQS-HVYVNTALVNMYVSLGFLKDSSKLF 132
T+ L+ CA + + LH K G + HV V TAL++MY L + K+F
Sbjct: 94 TFITLLSACADFPSESFFFASSLHGYACKYGLDTGHVMVGTALIDMYSKCAQLGHARKVF 153
Query: 133 DEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALA 192
+ +N V+WN M+ G ++ GE+E A LF+EMP R+ +SWT +I+G + S +AL
Sbjct: 154 YNLGVKNSVSWNTMLNGFMRNGEIELAIQLFDEMPTRDAISWTALINGLLKHGYSEQALE 213
Query: 193 LFRKM----VACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNC 248
F +M VA +Y ++I+AVL A G + +H + + F +I++ N
Sbjct: 214 CFHQMQRSGVAADY-----VSIIAVLAACADLGALTLGLWVHRFVMPQEFKD-NIKISNS 267
Query: 249 LIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLK 308
LID Y++CGCI A ++F + + ++ LVSW SII GFA++G E++E F MQK G K
Sbjct: 268 LIDMYSRCGCIEFARQVF--VKMAKRTLVSWNSIIVGFAVNGFADESLEFFXAMQKEGFK 325
Query: 309 PNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEK 368
P+ V++ L ACSH GLV +GL FD M ++ P I+HYGC++D+ GRAGRLE A
Sbjct: 326 PDGVSYTGALTACSHAGLVNKGLELFDNMKSVHKITPRIEHYGCIVDLYGRAGRLEDALN 385
Query: 369 TALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVG 428
+P + +VV+ +LL AC HG+V + ER+ + + +++ YVL+ NI A +G
Sbjct: 386 MIEEMPMKPNEVVL-GSLLAACRTHGDVNLAERLMKHLFKLDPEGDAYYVLLSNIYAAIG 444
Query: 429 RFGDAERLRRVMDERNAFKVPGCSLV 454
++ A +RR M R K PG S V
Sbjct: 445 KWDGANNVRRTMKARGVQKKPGYSSV 470
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 119/268 (44%), Gaps = 41/268 (15%)
Query: 161 SLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQN 220
S F +V WT + Y R + +EA A F +M EP+ IT + +L A
Sbjct: 47 SKFNPNSVDPIVLWTSSLARYCRNGQLSEAAAEFTRMRLAG-VEPNHITFITLLSAC--- 102
Query: 221 GDVKS-----CQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVER-- 273
D S +HGY K G + V LID Y+KC + A K+F ++ V+
Sbjct: 103 ADFPSESFFFASSLHGYACKYGLDTGHVMVGTALIDMYSKCAQLGHARKVFYNLGVKNSV 162
Query: 274 ---------------------------KNLVSWTSIISGFAMHGMGKEAVENFGRMQKVG 306
++ +SWT++I+G HG ++A+E F +MQ+ G
Sbjct: 163 SWNTMLNGFMRNGEIELAIQLFDEMPTRDAISWTALINGLLKHGYSEQALECFHQMQRSG 222
Query: 307 LKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQA 366
+ + V+ ++VL AC+ G + GL + + V E +IK LIDM R G +E A
Sbjct: 223 VAADYVSIIAVLAACADLGALTLGL-WVHRFVMPQEFKDNIKISNSLIDMYSRCGCIEFA 281
Query: 367 EKTALGIPSEITDVVVWRTLLGACSFHG 394
+ + + +V W +++ + +G
Sbjct: 282 RQVFVKMAKRT--LVSWNSIIVGFAVNG 307
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 78/189 (41%), Gaps = 37/189 (19%)
Query: 276 LVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFD 335
+V WTS ++ + +G EA F RM+ G++PN +TF+++L+AC+ E F
Sbjct: 57 IVLWTSSLARYCRNGQLSEAAAEFTRMRLAGVEPNHITFITLLSACAD--FPSESFFFAS 114
Query: 336 KM-VEECEVLPDIKHY---GCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACS 391
+ C+ D H LIDM + +L A K + + + V W T+L
Sbjct: 115 SLHGYACKYGLDTGHVMVGTALIDMYSKCAQLGHARKVFYNL--GVKNSVSWNTMLNGFM 172
Query: 392 FHGNVEMG-----ERVTRKIL-----------------------EMER-GYGGDYVLMYN 422
+G +E+ E TR + +M+R G DYV +
Sbjct: 173 RNGEIELAIQLFDEMPTRDAISWTALINGLLKHGYSEQALECFHQMQRSGVAADYVSIIA 232
Query: 423 ILAGVGRFG 431
+LA G
Sbjct: 233 VLAACADLG 241
>gi|356502930|ref|XP_003520267.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Glycine max]
Length = 780
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 142/421 (33%), Positives = 232/421 (55%), Gaps = 12/421 (2%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+N +++ ++L P KA LL+++++ + P + T ++ CA G
Sbjct: 242 WNAMINAFALGGLPDKALLLFQEMEM------KDVKP--NVITMVSVLSACAKKIDLEFG 293
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
+ + I GF H+ +N A+++MYV G + D+ LF++M E+++V+W M+ G K
Sbjct: 294 RWICSYIENNGFTEHLILNNAMLDMYVKCGCINDAKDLFNKMSEKDIVSWTTMLDGHAKL 353
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
G + A +F+ MP + +W +I Y + + AL+LF +M + +P E+T++
Sbjct: 354 GNYDEAHCIFDAMPHKWTAAWNALISAYEQNGKPRVALSLFHEMQLSKDAKPDEVTLICA 413
Query: 214 LPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVER 273
L A Q G + IH Y +K + + L+D YAKCG + A ++F +VER
Sbjct: 414 LCASAQLGAIDFGHWIHVYIKKHDIN-LNCHLATSLLDMYAKCGNLNKAMEVFH--AVER 470
Query: 274 KNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNF 333
K++ W+++I AM+G GK A++ F M + +KPN VTF ++L AC+H GLV EG
Sbjct: 471 KDVYVWSAMIGALAMYGQGKAALDLFSSMLEAYIKPNAVTFTNILCACNHAGLVNEGEQL 530
Query: 334 FDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFH 393
F++M ++P I+HY C++D+ GRAG LE+A +P T VW LLGACS H
Sbjct: 531 FEQMEPLYGIVPQIQHYVCVVDIFGRAGLLEKAASFIEKMPIPPT-AAVWGALLGACSRH 589
Query: 394 GNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSL 453
GNVE+ E + +LE+E G +VL+ NI A G + LR++M + + K P CS
Sbjct: 590 GNVELAELAYQNLLELEPCNHGAFVLLSNIYAKAGDWEKVSNLRKLMRDSDVKKEPWCSS 649
Query: 454 V 454
+
Sbjct: 650 I 650
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 104/407 (25%), Positives = 183/407 (44%), Gaps = 77/407 (18%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+NTL+ Y+ + P ++FL++ + HS S P + FT+ FL + + L +LG
Sbjct: 140 WNTLIRGYASSSDPTQSFLIFLHM----LHSCSEFP---NKFTFPFLFKAASRLKVLHLG 192
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
+ LH ++ K S +++ +L+N Y S G + ++F MP +++V+WN MI
Sbjct: 193 SVLHGMVIKASLSSDLFILNSLINFYGSSGAPDLAHRVFTNMPGKDVVSWNAMINAFALG 252
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
G + A LF+EM ++V +P+ IT+++V
Sbjct: 253 GLPDKALLLFQEMEMKDV--------------------------------KPNVITMVSV 280
Query: 214 LPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVER 273
L A + D++ + I Y E GFT I + N ++D Y KCGCI A LF +S
Sbjct: 281 LSACAKKIDLEFGRWICSYIENNGFTEHLI-LNNAMLDMYVKCGCINDAKDLFNKMS--E 337
Query: 274 KNLVSWT-------------------------------SIISGFAMHGMGKEAVENFGRM 302
K++VSWT ++IS + +G + A+ F M
Sbjct: 338 KDIVSWTTMLDGHAKLGNYDEAHCIFDAMPHKWTAAWNALISAYEQNGKPRVALSLFHEM 397
Query: 303 Q-KVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAG 361
Q KP+ VT + L A + G ++ G ++ +++ ++ + L+DM + G
Sbjct: 398 QLSKDAKPDEVTLICALCASAQLGAIDFG-HWIHVYIKKHDINLNCHLATSLLDMYAKCG 456
Query: 362 RLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILE 408
L +A + + E DV VW ++GA + +G + + +LE
Sbjct: 457 NLNKAMEVFHAV--ERKDVYVWSAMIGALAMYGQGKAALDLFSSMLE 501
>gi|125541284|gb|EAY87679.1| hypothetical protein OsI_09093 [Oryza sativa Indica Group]
Length = 493
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 147/392 (37%), Positives = 233/392 (59%), Gaps = 10/392 (2%)
Query: 67 PLPPLFDSFTYSFLIRTCA-TLSHP---NLGTQLHAVISKVGFQSHVYVNTALVNMYVSL 122
P P+ + T ++ CA + S P L +HA + K+ F SH+ ++T LV Y +
Sbjct: 60 PAAPVPNDVTLLTVLSACADSPSSPLARRLALSVHARVLKL-FPSHLLLSTCLVRFYFAS 118
Query: 123 GFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYT 182
+ +LFD MP R+ VT+N +I+GL++ G + A +F+ MP + VSWT +IDG
Sbjct: 119 RLPHLALQLFDAMPVRSAVTYNTVISGLMRNGLVAAAFEVFDGMPAPDKVSWTALIDGCV 178
Query: 183 RMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFD 242
+ R +EA+ FR M+ + EP +T++AV+ A + G + +H ++G +
Sbjct: 179 KNGRHDEAINCFRAML-LDGVEPDYVTLIAVISACAEVGALGLGMWVHRLVVRQGLER-N 236
Query: 243 IRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRM 302
+R+ N LID YA+CG + A ++F + ++ +VSW S+I GFA +G +AVE+F M
Sbjct: 237 VRIANSLIDMYARCGQVELARQVFS--GMRKRTVVSWNSMIVGFAANGRCADAVEHFEAM 294
Query: 303 QKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGR 362
++ G KP+ VTF VL ACSHGGL +EGL ++D M E + ++HYGC++D+LGR+GR
Sbjct: 295 RREGFKPDAVTFTGVLTACSHGGLTDEGLRYYDLMRAEYGIAARMEHYGCVVDLLGRSGR 354
Query: 363 LEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYN 422
LE+A + +P +VV+ LL C HG+V M E++ + +LE++ G +YVL+ N
Sbjct: 355 LEEAMRVVTTMPMRPNEVVLG-ALLAGCRMHGDVGMAEQLMQHLLELDPGGDANYVLLSN 413
Query: 423 ILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
I A VG++ A ++R +M R K PG S V
Sbjct: 414 IYAAVGKWDGAGKVRSLMKARGLRKRPGYSAV 445
>gi|356561762|ref|XP_003549147.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g66520-like [Glycine max]
Length = 622
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 164/466 (35%), Positives = 252/466 (54%), Gaps = 34/466 (7%)
Query: 16 QIHSHLLTTNSLLHHSQLFNTLLHFYSLA----------ESPQKAFLLYKQLQQIYTHSH 65
Q H+ L+TT +L+ H N LL + A + PQ +Y + I HS
Sbjct: 34 QTHAQLITT-ALISHPVSANKLLKLAACASLSYAHKLFDQIPQPDLFIYNTM--IKAHSL 90
Query: 66 SP----------------LPPLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHV 109
SP L + +++ F C G Q+ KVG +++V
Sbjct: 91 SPHSCHNSLIVFRSLTQDLGLFPNRYSFVFAFSACGNGLGVQEGEQVRIHAVKVGLENNV 150
Query: 110 YVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCR 169
+V AL+ MY G + +S K+F +R+L +WN +I V G + A+ LF+ M R
Sbjct: 151 FVVNALIGMYGKWGLVGESQKVFQWAVDRDLYSWNTLIAAYVGSGNMSLAKELFDGMRER 210
Query: 170 NVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLI 229
+VVSW+ II GY ++ EAL F KM+ +P+E T+++ L A + + I
Sbjct: 211 DVVSWSTIIAGYVQVGCFMEALDFFHKMLQIG-PKPNEYTLVSALAACSNLVALDQGKWI 269
Query: 230 HGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMH 289
H Y K G + R+L +ID YAKCG I SAS++F + V++K + W ++I GFAMH
Sbjct: 270 HAYIGK-GEIKMNERLLASIIDMYAKCGEIESASRVFFEHKVKQKVWL-WNAMIGGFAMH 327
Query: 290 GMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKH 349
GM EA+ F +M+ + PN+VTF+++LNACSHG +VEEG +F MV + + P+I+H
Sbjct: 328 GMPNEAINVFEQMKVEKISPNKVTFIALLNACSHGYMVEEGKLYFRLMVSDYAITPEIEH 387
Query: 350 YGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEM 409
YGC++D+L R+G L++AE +P DV +W LL AC + ++E G R+ R I M
Sbjct: 388 YGCMVDLLSRSGLLKEAEDMISSMPMA-PDVAIWGALLNACRIYKDMERGYRIGRIIKGM 446
Query: 410 ERGYGGDYVLMYNILAGVGRFGDAERLRRVMD-ERNAFKVPGCSLV 454
+ + G +VL+ NI + GR+ +A LR + R+ K+PGCS +
Sbjct: 447 DPNHIGCHVLLSNIYSTSGRWNEARILREKNEISRDRKKIPGCSSI 492
>gi|359485688|ref|XP_002275048.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Vitis vinifera]
gi|297739328|emb|CBI28979.3| unnamed protein product [Vitis vinifera]
Length = 585
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 171/548 (31%), Positives = 271/548 (49%), Gaps = 108/548 (19%)
Query: 1 MHILQNSQTPNNITTQIHSHLLTTN-----------------------------SLLHHS 31
+ +LQ S+T + I QIH+ L+TTN + +H
Sbjct: 15 LSLLQKSKTSSQIL-QIHAQLITTNLISDTFAASRLLDSVVSKTLNVNYAELVFAQIHQP 73
Query: 32 QLF--NTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSH 89
F NT++ Y+ + +P++A Y ++++ L D++TY F+++ C +
Sbjct: 74 NSFICNTMVKCYTESSTPERALRFYAEMRR--------KGLLGDNYTYPFVLKACGAMCG 125
Query: 90 PNLGTQLHAVISKVGFQSHVYVNTALVNMY------------------------------ 119
G + K GF V+V L++MY
Sbjct: 126 LLEGGLVQGEAVKRGFGGDVFVVNGLISMYCRCGETGWARAVFDGFSEKDLVSWNSMLGG 185
Query: 120 -VSLGFLKDSSKLFDEMPERNLVTWNVMITG----------------------LVKW--- 153
V G ++++ +FDEMPER++V+W++MI G LV W
Sbjct: 186 YVWCGEMENAQNMFDEMPERDVVSWSIMIDGYGKKMGEVNRARVFFDSMPTRDLVSWNSM 245
Query: 154 -------GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPS 206
GE+E AR +F++M +NV+SW+ +IDGY + S EAL LFR+M+ C+ +P
Sbjct: 246 IDGYAKVGEMEVAREIFDKMLQKNVISWSIMIDGYAQHRDSKEALNLFRQML-CQGIKPD 304
Query: 207 EITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLF 266
++++ + A Q G + + IH Y KR DI V L+D Y KCG A ++F
Sbjct: 305 RVSVVGAVSACSQLGALDQGRWIHLY-MKRNRMLLDIVVQTALVDMYLKCGSRDEARRIF 363
Query: 267 EDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGL 326
S+ +N+VSW +I G M+G GKEA+E F +M+ + + + FL VL ACSH L
Sbjct: 364 N--SMPERNVVSWNVMIVGLGMNGFGKEALECFTQMEMERIPMDDLLFLGVLMACSHANL 421
Query: 327 VEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTL 386
V EGL+ F++M + P ++HYGCL+D+LGRAG+L+Q + +P + + +W +L
Sbjct: 422 VTEGLHIFNQMKGVYRLEPKLEHYGCLVDLLGRAGQLDQIQNIIQSMPMK-PNAALWGSL 480
Query: 387 LGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAF 446
L AC H NV + E V ++ E++ G YVLM NI A VG + R+R++M ER
Sbjct: 481 LLACRIHQNVTLAEIVVERLAELKADDSGVYVLMSNIYADVGMWEGMLRIRKLMKERKMK 540
Query: 447 KVPGCSLV 454
K G S++
Sbjct: 541 KDIGRSVI 548
>gi|449443656|ref|XP_004139593.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05750,
chloroplastic-like [Cucumis sativus]
Length = 525
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 146/386 (37%), Positives = 221/386 (57%), Gaps = 16/386 (4%)
Query: 76 TYSFLIRTCATLSHPNL--GTQLHAVISKVGFQS-HVYVNTALVNMYVSLGFLKDSSKLF 132
T+ L+ CA + + LH K G + HV V TAL++MY L + K+F
Sbjct: 94 TFITLLSACADFPSESFFFASSLHGYACKYGLDTGHVMVGTALIDMYSKCAQLGHARKVF 153
Query: 133 DEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALA 192
+ +N V+WN M+ G ++ GE+E A LF+EMP R+ +SWT +I+G + S +AL
Sbjct: 154 YNLGVKNSVSWNTMLNGFMRNGEIELAIQLFDEMPTRDAISWTALINGLLKHGYSEQALE 213
Query: 193 LFRKM----VACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNC 248
F +M VA +Y ++I+AVL A G + +H + + F +I++ N
Sbjct: 214 CFHQMQRSGVAADY-----VSIIAVLAACADLGALTLGLWVHRFVMPQEFKD-NIKISNS 267
Query: 249 LIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLK 308
LID Y++CGCI A ++F + + ++ LVSW SII GFA++G E++E F MQK G K
Sbjct: 268 LIDMYSRCGCIEFARQVF--VKMAKRTLVSWNSIIVGFAVNGFADESLEFFYAMQKEGFK 325
Query: 309 PNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEK 368
P+ V++ L ACSH GLV +GL FD M ++ P I+HYGC++D+ GRAGRLE A
Sbjct: 326 PDGVSYTGALTACSHAGLVNKGLELFDNMKSVHKITPRIEHYGCIVDLYGRAGRLEDALN 385
Query: 369 TALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVG 428
+P + +VV+ +LL AC HG+V + ER+ + + +++ YVL+ NI A +G
Sbjct: 386 MIEEMPMKPNEVVL-GSLLAACRTHGDVNLAERLMKHLFKLDPEGDAYYVLLSNIYAAIG 444
Query: 429 RFGDAERLRRVMDERNAFKVPGCSLV 454
++ A +RR M R K PG S V
Sbjct: 445 KWDGANNVRRTMKARGVQKKPGYSSV 470
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 119/268 (44%), Gaps = 41/268 (15%)
Query: 161 SLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQN 220
S F +V WT + Y R + +EA A F +M EP+ IT + +L A
Sbjct: 47 SKFNPNSVDPIVLWTSSLARYCRNGQLSEAAAEFTRMRLAG-VEPNHITFITLLSAC--- 102
Query: 221 GDVKS-----CQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVER-- 273
D S +HGY K G + V LID Y+KC + A K+F ++ V+
Sbjct: 103 ADFPSESFFFASSLHGYACKYGLDTGHVMVGTALIDMYSKCAQLGHARKVFYNLGVKNSV 162
Query: 274 ---------------------------KNLVSWTSIISGFAMHGMGKEAVENFGRMQKVG 306
++ +SWT++I+G HG ++A+E F +MQ+ G
Sbjct: 163 SWNTMLNGFMRNGEIELAIQLFDEMPTRDAISWTALINGLLKHGYSEQALECFHQMQRSG 222
Query: 307 LKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQA 366
+ + V+ ++VL AC+ G + GL + + V E +IK LIDM R G +E A
Sbjct: 223 VAADYVSIIAVLAACADLGALTLGL-WVHRFVMPQEFKDNIKISNSLIDMYSRCGCIEFA 281
Query: 367 EKTALGIPSEITDVVVWRTLLGACSFHG 394
+ + + +V W +++ + +G
Sbjct: 282 RQVFVKMAKRT--LVSWNSIIVGFAVNG 307
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 78/189 (41%), Gaps = 37/189 (19%)
Query: 276 LVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFD 335
+V WTS ++ + +G EA F RM+ G++PN +TF+++L+AC+ E F
Sbjct: 57 IVLWTSSLARYCRNGQLSEAAAEFTRMRLAGVEPNHITFITLLSACAD--FPSESFFFAS 114
Query: 336 KM-VEECEVLPDIKHY---GCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACS 391
+ C+ D H LIDM + +L A K + + + V W T+L
Sbjct: 115 SLHGYACKYGLDTGHVMVGTALIDMYSKCAQLGHARKVFYNL--GVKNSVSWNTMLNGFM 172
Query: 392 FHGNVEMG-----ERVTRKIL-----------------------EMER-GYGGDYVLMYN 422
+G +E+ E TR + +M+R G DYV +
Sbjct: 173 RNGEIELAIQLFDEMPTRDAISWTALINGLLKHGYSEQALECFHQMQRSGVAADYVSIIA 232
Query: 423 ILAGVGRFG 431
+LA G
Sbjct: 233 VLAACADLG 241
>gi|357510067|ref|XP_003625322.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355500337|gb|AES81540.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 1024
Score = 262 bits (670), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 128/375 (34%), Positives = 218/375 (58%), Gaps = 4/375 (1%)
Query: 80 LIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERN 139
++ C+ + + +G ++H + + + + ++ AL++MYV L D+ +LFD M ++
Sbjct: 364 VVSACSDMGNLEMGKRVHEKVEEKNMRCSLSLHNALLDMYVKCDCLVDARELFDRMATKD 423
Query: 140 LVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVA 199
+ +W M+ G K G+LE AR F++ P +N V W+ +I GY++ N+ E+L LF +M+
Sbjct: 424 VYSWTSMVNGYAKCGDLESARRFFDQTPRKNAVCWSAMIAGYSQNNKPKESLKLFHEMME 483
Query: 200 CEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCI 259
P E T+++VL A Q + IH Y + + N ++D YAKCG I
Sbjct: 484 -RGVVPIEHTLVSVLSACGQLTCLNLGDWIHQYFVVGKIIPLSVTLENAIVDMYAKCGSI 542
Query: 260 FSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLN 319
+A+++F ++ +NL+SW ++I+G+A +G K+A+ F +M+ +G +PN +TF+S+L
Sbjct: 543 DAATEVFS--TMPERNLISWNTMIAGYAANGRAKQAINVFDQMRNMGFEPNNITFVSLLT 600
Query: 320 ACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITD 379
ACSHGGL+ EG +FD M + + P+ HY C++D+LGR G LE+A K +P + +
Sbjct: 601 ACSHGGLISEGREYFDNMERKYGIKPERGHYACMVDLLGRTGLLEEAYKLIANMPMQPCE 660
Query: 380 VVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRV 439
W LL AC HGNVE+ +L ++ G YVL+ N A ++ D R+R +
Sbjct: 661 -AAWGALLNACRMHGNVELARLSAHNLLRLDPEDSGIYVLLANTCANDRKWSDVRRVRSL 719
Query: 440 MDERNAFKVPGCSLV 454
M ++ K+PG SL+
Sbjct: 720 MKDKGVKKIPGYSLI 734
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 96/439 (21%), Positives = 191/439 (43%), Gaps = 76/439 (17%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNL 92
++NT++ Y A P AF + + Q+ DS ++ F ++ C
Sbjct: 224 MWNTMIRGYQNARKPIFAFSFFVYMFQLRVE--------MDSRSFVFALKACQQFETVFE 275
Query: 93 GTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVK 152
G ++ V+ K+GF + V L++ Y G LK+
Sbjct: 276 GESVYCVVWKMGFDCELLVRNGLIHFYAERGLLKN------------------------- 310
Query: 153 WGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILA 212
AR +F+E ++VV+WT +IDGY + S EA+ +F M+ + EP+E+T++A
Sbjct: 311 ------ARQVFDESSDKDVVTWTTMIDGYAAHDCSEEAMEVFELMLL-SHVEPNEVTLIA 363
Query: 213 VLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVE 272
V+ A G+++ + +H E++ + + N L+D Y KC C+ A +LF+ ++ +
Sbjct: 364 VVSACSDMGNLEMGKRVHEKVEEKNMRC-SLSLHNALLDMYVKCDCLVDARELFDRMATK 422
Query: 273 -----------------------------RKNLVSWTSIISGFAMHGMGKEAVENFGRMQ 303
RKN V W+++I+G++ + KE+++ F M
Sbjct: 423 DVYSWTSMVNGYAKCGDLESARRFFDQTPRKNAVCWSAMIAGYSQNNKPKESLKLFHEMM 482
Query: 304 KVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLP-DIKHYGCLIDMLGRAGR 362
+ G+ P T +SVL+AC + G ++ + +++P + ++DM + G
Sbjct: 483 ERGVVPIEHTLVSVLSACGQLTCLNLG-DWIHQYFVVGKIIPLSVTLENAIVDMYAKCGS 541
Query: 363 LEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYN 422
++ A + +P +++ W T++ + +G + V ++ M G+ + + +
Sbjct: 542 IDAATEVFSTMPER--NLISWNTMIAGYAANGRAKQAINVFDQMRNM--GFEPNNITFVS 597
Query: 423 ILAGVGRFGDAERLRRVMD 441
+L G R D
Sbjct: 598 LLTACSHGGLISEGREYFD 616
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 124/257 (48%), Gaps = 7/257 (2%)
Query: 145 VMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTE 204
+ L G+L +A ++F + N W +I GY + A + F M
Sbjct: 196 IAFCALAHSGDLHYAHTIFNRVEQPNTFMWNTMIRGYQNARKPIFAFSFFVYMFQLRVEM 255
Query: 205 PSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASK 264
S + A L A Q V + ++ K GF ++ V N LI YA+ G + +A +
Sbjct: 256 DSRSFVFA-LKACQQFETVFEGESVYCVVWKMGFDC-ELLVRNGLIHFYAERGLLKNARQ 313
Query: 265 LFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHG 324
+F++ S K++V+WT++I G+A H +EA+E F M ++PN VT ++V++ACS
Sbjct: 314 VFDESS--DKDVVTWTTMIDGYAAHDCSEEAMEVFELMLLSHVEPNEVTLIAVVSACSDM 371
Query: 325 GLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWR 384
G +E G +K VEE + + + L+DM + L A + + ++ DV W
Sbjct: 372 GNLEMGKRVHEK-VEEKNMRCSLSLHNALLDMYVKCDCLVDARELFDRMATK--DVYSWT 428
Query: 385 TLLGACSFHGNVEMGER 401
+++ + G++E R
Sbjct: 429 SMVNGYAKCGDLESARR 445
>gi|125542569|gb|EAY88708.1| hypothetical protein OsI_10183 [Oryza sativa Indica Group]
Length = 510
Score = 262 bits (670), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 148/389 (38%), Positives = 235/389 (60%), Gaps = 17/389 (4%)
Query: 73 DSFTYSFLIRTCAT-LSHPNLGTQLHAVISKVGF----QSHVYVNTALVNMYVSLGFLKD 127
D+FT++F +++C+ +S L + LHA K G SHV+V+ AL++ Y S + D
Sbjct: 120 DAFTFTFALKSCSRCVSQRRLPSDLHAQAIKHGCLGAGSSHVHVHNALLHGYSSRAAVGD 179
Query: 128 SSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRS 187
+ ++FDEMP R++++++ ++T +K +L+ AR +F++MP R+VVSWT +I Y R R
Sbjct: 180 ARRVFDEMPARDVISFSGLLTLHLKANDLDAARVVFDQMPHRDVVSWTAMISAYARARRP 239
Query: 188 NEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLN 247
EALALF M +P E+T+L+V+ A GD+ + + + Y + GF + + + N
Sbjct: 240 REALALFDAMP----VQPDEVTMLSVVSACTALGDLATGERVCQYVDSNGF-GWMVSLRN 294
Query: 248 CLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVG- 306
L+D YAKCG + A LF+ ++V ++L SW + IS +A HG + V F RM G
Sbjct: 295 ALMDMYAKCGSLTEARNLFDGMTV--RSLASWNTFISAYASHGDVESTVALFHRMLADGK 352
Query: 307 -LKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEE--CEVLPDIKHYGCLIDMLGRAGRL 363
+KP+ T L+VL A +H G VEEG F+ ++ +V I+HYGC++D+LGRAG+L
Sbjct: 353 SVKPDGTTLLAVLTAYAHKGFVEEGRAMFNAILSGNYGKVDLTIEHYGCMVDLLGRAGQL 412
Query: 364 EQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNI 423
E+A K +P ++ VVW LLGAC HG++ M ER +K+ + GG Y+L+ ++
Sbjct: 413 EEAYKMIEQMPIP-SNSVVWGALLGACRTHGDINMAERAVQKLRSLNPEEGGYYILLSDM 471
Query: 424 LAGVGRFGDAERLRRVMDERNAFKVPGCS 452
A GR +A +RR+M++ A K G S
Sbjct: 472 YAASGRTTEAMEIRRIMNQAGAQKTAGQS 500
>gi|356518777|ref|XP_003528054.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Glycine max]
Length = 737
Score = 262 bits (670), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 161/461 (34%), Positives = 246/461 (53%), Gaps = 25/461 (5%)
Query: 13 ITTQIHSHLLTTNSLLHHSQLFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPP-- 70
+ +H HL+ T +L + L N L+ YS + A + L T S + L
Sbjct: 28 LANAVHGHLIKT-ALFFDAFLANGLIDAYSKCGCEESAHKTFGDLPNKTTRSWNTLISFY 86
Query: 71 -----------LFDSFTYSFLIRTCATLSHPNLG--TQLHAVISKVGFQSHVYVNTALVN 117
LFD ++ + +S NL Q+H V VG + +V +N AL++
Sbjct: 87 SKTGFFDEAHNLFDKMPQRNVVSYNSLISG-NLQWLRQVHGVAVIVGMEWNVILNNALID 145
Query: 118 MYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGI 177
Y G S +F MPERN+V+W M+ + L+ A +F++MP +N VSWT +
Sbjct: 146 AYGKCGEPNLSFSVFCYMPERNVVSWTSMVVAYTRACRLDEACRVFKDMPVKNTVSWTAL 205
Query: 178 IDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGY---GE 234
+ G+ R +EA +F++M+ E PS T ++V+ A Q + + +HG G+
Sbjct: 206 LTGFVRNGGCDEAFDVFKQMLE-EGVRPSAPTFVSVIDACAQEALIGRGKQVHGQIIRGD 264
Query: 235 KRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKE 294
K G F++ V N LID YAKCG + SA LFE + +++V+W ++I+GFA +G G+E
Sbjct: 265 KSG-NLFNVYVCNALIDMYAKCGDMKSAENLFEMAPM--RDVVTWNTLITGFAQNGHGEE 321
Query: 295 AVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLI 354
++ F RM + ++PN VTFL VL+ C+H GL EGL D M + V P +HY LI
Sbjct: 322 SLAVFRRMIEAKVEPNHVTFLGVLSGCNHAGLDNEGLQLVDLMERQYGVKPKAEHYALLI 381
Query: 355 DMLGRAGRLEQAEKTALGIPSEITD-VVVWRTLLGACSFHGNVEMGERVTRKILEMERGY 413
D+LGR RL +A +P I + + VW +LGAC HGN+++ + K+ E+E
Sbjct: 382 DLLGRRNRLMEAMSLIEKVPDGIKNHIAVWGAVLGACRVHGNLDLARKAAEKLFELEPEN 441
Query: 414 GGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
G YV++ NI A G++G A+R+R VM ER K P CS +
Sbjct: 442 TGRYVMLANIYAASGKWGGAKRIRNVMKERCLEKEPACSRI 482
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 100/366 (27%), Positives = 177/366 (48%), Gaps = 20/366 (5%)
Query: 77 YSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMP 136
YSFLI C T L +H + K ++ L++ Y G + + K F ++P
Sbjct: 13 YSFLISKCITARRVKLANAVHGHLIKTALFFDAFLANGLIDAYSKCGCEESAHKTFGDLP 72
Query: 137 ERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRK 196
+ +WN +I+ K G + A +LF++MP RNVVS+ +I G + R +A+
Sbjct: 73 NKTTRSWNTLISFYSKTGFFDEAHNLFDKMPQRNVVSYNSLISGNLQWLRQVHGVAVIVG 132
Query: 197 MVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKC 256
M E + I A++ A + G+ + Y +R ++ ++ Y +
Sbjct: 133 M------EWNVILNNALIDAYGKCGEPNLSFSVFCYMPERNVVSW-----TSMVVAYTRA 181
Query: 257 GCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLS 316
+ A ++F+D+ V KN VSWT++++GF +G EA + F +M + G++P+ TF+S
Sbjct: 182 CRLDEACRVFKDMPV--KNTVSWTALLTGFVRNGGCDEAFDVFKQMLEEGVRPSAPTFVS 239
Query: 317 VLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGC--LIDMLGRAGRLEQAEKTALGIP 374
V++AC+ L+ G +++ + Y C LIDM + G ++ AE P
Sbjct: 240 VIDACAQEALIGRGKQVHGQIIRGDKSGNLFNVYVCNALIDMYAKCGDMKSAENLFEMAP 299
Query: 375 SEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFG-DA 433
+ DVV W TL+ + +G+ E V R+++E + ++V +L+G G D
Sbjct: 300 --MRDVVTWNTLITGFAQNGHGEESLAVFRRMIEAK--VEPNHVTFLGVLSGCNHAGLDN 355
Query: 434 ERLRRV 439
E L+ V
Sbjct: 356 EGLQLV 361
>gi|449490721|ref|XP_004158687.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g21065-like [Cucumis sativus]
Length = 609
Score = 262 bits (670), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 152/446 (34%), Positives = 248/446 (55%), Gaps = 48/446 (10%)
Query: 9 TPNNITTQIHSHLLTTNSLLHHSQLFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPL 68
P + QI + + N +NT++ ++ +E+P A L+ Q+ H+ S +
Sbjct: 83 APMSFAAQIFNQIQAPNIFT-----WNTMIRGFAESENPSPAVELFSQM-----HAASSI 132
Query: 69 PPLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDS 128
P D+ T+ FL + A L +LG +H+V+ + GF S +V +LV+MY LG L
Sbjct: 133 LP--DTHTFPFLFKAVAKLMDVSLGEGIHSVVVRNGFDSLRFVQNSLVHMYSVLGSLXS- 189
Query: 129 SKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSN 188
A +FE M R+ V+W +I+G+ N
Sbjct: 190 ------------------------------AYQVFEIMSYRDRVAWNSVINGFALNGMPN 219
Query: 189 EALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNC 248
EAL L+R+M E EP T++++L A + G + + +H Y K G + N
Sbjct: 220 EALTLYREM-GSEGVEPDGFTMVSLLSACVELGALALGERVHMYMVKVGLVQ-NQHASNA 277
Query: 249 LIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLK 308
L+D Y+KCG A K+F+++ E +++VSWTS+I G A++G+G EA++ FG +++ GLK
Sbjct: 278 LLDLYSKCGNFRDAQKVFDEM--EERSVVSWTSLIVGLAVNGLGNEALKLFGELERQGLK 335
Query: 309 PNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEK 368
P+ +TF+ VL ACSH G+++EG N+F +M EE +LP I+H+GC++D+L RAG++ A
Sbjct: 336 PSEITFVGVLYACSHCGMLDEGFNYFRRMKEEYGILPRIEHHGCMVDLLCRAGKVGDAYD 395
Query: 369 TALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVG 428
+P + V+WRTLLGAC+ HG++E+GE +I +E+ + GD+VL+ N+ A
Sbjct: 396 YIRNMPVP-PNAVIWRTLLGACTIHGHLELGEVARAEIQRLEQRHSGDFVLLSNLYASER 454
Query: 429 RFGDAERLRRVMDERNAFKVPGCSLV 454
R+ D + +R++M + K PG SLV
Sbjct: 455 RWLDVQNVRKIMLMKGVKKTPGYSLV 480
>gi|357453191|ref|XP_003596872.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87240903|gb|ABD32761.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355485920|gb|AES67123.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 517
Score = 262 bits (670), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 148/368 (40%), Positives = 221/368 (60%), Gaps = 9/368 (2%)
Query: 80 LIRTCA---TLSHPNLGTQLHAVISKVGFQ-SHVYVNTALVNMYVSLGFLKDSSKLFDEM 135
L+ CA + + G LH K GF + V V TAL++MY G L + +FD+M
Sbjct: 93 LLSACAHSPSKTSITFGAALHTHAFKHGFAMNDVMVGTALIDMYAKCGKLDYARLVFDQM 152
Query: 136 PERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFR 195
RNLV+WN MI G +K G+++ A LF+++P +NVVSWT +I G+ + EAL FR
Sbjct: 153 GVRNLVSWNTMIDGYMKNGDVDDALKLFDKLPVKNVVSWTVVIGGFVKKECYEEALECFR 212
Query: 196 KMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAK 255
+M P +T++A++ A G + +H K+ F +++VLN LID YA+
Sbjct: 213 EMQLAGVV-PDFVTVIAIISACANLGALGLGLWVHRLVMKKEFRD-NVKVLNSLIDMYAR 270
Query: 256 CGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFL 315
CGCI A ++F+ +S ++NLVSW SII GFA++G+ +A+ F M+K GL+PN V++
Sbjct: 271 CGCIELARQVFDGMS--QRNLVSWNSIIVGFAVNGLADKALSFFRSMKKEGLEPNGVSYT 328
Query: 316 SVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPS 375
S L ACSH GL++EGL F + + P I+HYGCL+D+ RAGRL++A +P
Sbjct: 329 SALTACSHAGLIDEGLKIFADIKRDHRNSPRIEHYGCLVDLYSRAGRLKEAWDVIKKMPM 388
Query: 376 EITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAER 435
+VV+ +LL AC G+VE+ E+V + +E+ G +YVL NI A VG++ A +
Sbjct: 389 MPNEVVL-GSLLAACRTQGDVELAEKVMKYQVELYPGGDSNYVLFSNIYAAVGKWDGASK 447
Query: 436 LRRVMDER 443
+RR M ER
Sbjct: 448 VRREMKER 455
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 87/200 (43%), Gaps = 44/200 (22%)
Query: 73 DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLF 132
D T +I CA L LG +H ++ K F+ +V V +L++MY G ++ + ++F
Sbjct: 222 DFVTVIAIISACANLGALGLGLWVHRLVMKKEFRDNVKVLNSLIDMYARCGCIELARQVF 281
Query: 133 DEMPERNLVTWNVMITGLVKWG----ELEFARSLFEEMPCRNVVSWTG------------ 176
D M +RNLV+WN +I G G L F RS+ +E N VS+T
Sbjct: 282 DGMSQRNLVSWNSIIVGFAVNGLADKALSFFRSMKKEGLEPNGVSYTSALTACSHAGLID 341
Query: 177 ------------------------IIDGYTRMNRSNEALALFRKMVACEYTEPSEITILA 212
++D Y+R R EA + +KM P+E+ + +
Sbjct: 342 EGLKIFADIKRDHRNSPRIEHYGCLVDLYSRAGRLKEAWDVIKKMPMM----PNEVVLGS 397
Query: 213 VLPAIWQNGDVKSCQLIHGY 232
+L A GDV+ + + Y
Sbjct: 398 LLAACRTQGDVELAEKVMKY 417
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 64/135 (47%), Gaps = 9/135 (6%)
Query: 277 VSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGG---LVEEGLNF 333
VSWTS IS + +A F +M + ++PN +T +++L+AC+H + G
Sbjct: 53 VSWTSSISHHCKNNNFLKAASEFIQMLEAEVEPNHITLITLLSACAHSPSKTSITFGAAL 112
Query: 334 FDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKT--ALGIPSEITDVVVWRTLLGACS 391
+ + D+ LIDM + G+L+ A +G + ++V W T++
Sbjct: 113 HTHAFKHGFAMNDVMVGTALIDMYAKCGKLDYARLVFDQMG----VRNLVSWNTMIDGYM 168
Query: 392 FHGNVEMGERVTRKI 406
+G+V+ ++ K+
Sbjct: 169 KNGDVDDALKLFDKL 183
>gi|449446195|ref|XP_004140857.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 593
Score = 262 bits (670), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 146/411 (35%), Positives = 232/411 (56%), Gaps = 13/411 (3%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+N+++ Y +K L++++Q I + DS T I LS +G
Sbjct: 182 WNSIICGYYQFNRFKKVLDLFREMQAINVRA--------DSVTMMKAISATCFLSEWEMG 233
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
L I + G +Y+ L++MY G + + ++F +M E+N+V+WN MI G K
Sbjct: 234 DYLVKYIDEHGVVVDLYLGNTLIDMYGRRGMIDFAGRVFYQMKEKNIVSWNAMIMGYAKV 293
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
G L A+ LF EMP R+V+SWT +I GY+ + EA+ LF++M+ +P EIT+
Sbjct: 294 GNLVAAKKLFNEMPSRDVISWTSMIIGYSLAKQHAEAVKLFQEMMV-SMVKPDEITVATA 352
Query: 214 LPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVER 273
L A G + + + +H Y K + D+ V N LID Y KCG + A ++F D+ +
Sbjct: 353 LSACAHLGSLDAGEAVHDYIRKHDIKS-DVFVGNSLIDMYCKCGVVEKALQVFNDM--KT 409
Query: 274 KNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNF 333
++ VSWTSIISG A++G + A+ F +M K G+ P TF+ VL AC+H GLV++G+
Sbjct: 410 RDSVSWTSIISGLAVNGFAESALNVFDQMLKEGICPTHGTFVGVLLACAHVGLVDKGVEH 469
Query: 334 FDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFH 393
F M + P++KHYGC++D+L R+G L+ A +P + DVV+WR LL AC H
Sbjct: 470 FKSMENTYRLAPEMKHYGCVVDLLCRSGYLDMAYNFIKKMPI-VPDVVIWRILLSACKLH 528
Query: 394 GNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERN 444
GN+ + E V++K+L ++ G+YVL + AG R+ D ++R++M+ N
Sbjct: 529 GNLVLAEIVSKKLLVLDPSNNGNYVLSSSTYAGSDRWDDVIKIRKLMEVTN 579
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 121/459 (26%), Positives = 207/459 (45%), Gaps = 93/459 (20%)
Query: 4 LQNSQTPNNITTQIHSHLLTTNSLLHHSQLFNTLLHFYSLAESPQKAFLLYKQLQQ---- 59
+ NS + N+I ++H+ L+ + S + + H+ +S KA ++ Q+Q+
Sbjct: 21 ISNSTSLNSIK-ELHAQLVRAQMHIDPSSISEVIKHYALSPQSLPKAHFVFNQIQRPTLL 79
Query: 60 IYTH-----SHSPLPPLFDSF--------------TYSFLIRTCATLSHPNLGTQLHAVI 100
++ H S S P F T+ FL ++CA +S G +
Sbjct: 80 VWNHMIHGLSKSDRPNDAIHFYNTMYYKGIQGSHLTFIFLFKSCARVSDVRQGQMVRVHS 139
Query: 101 SKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFAR 160
K+GF+S+++V+ AL++MYV +GEL A+
Sbjct: 140 MKLGFESYLFVSNALIHMYVC-------------------------------FGELAMAQ 168
Query: 161 SLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAI--- 217
+F+ M R+VVSW II GY + NR + L LFR+M A S +T++ + A
Sbjct: 169 KVFDGMLERDVVSWNSIICGYYQFNRFKKVLDLFREMQAINVRADS-VTMMKAISATCFL 227
Query: 218 --WQNGD--VKSCQ-------------LIHGYGEKRGFTAFDIRVL-----------NCL 249
W+ GD VK LI YG +RG F RV N +
Sbjct: 228 SEWEMGDYLVKYIDEHGVVVDLYLGNTLIDMYG-RRGMIDFAGRVFYQMKEKNIVSWNAM 286
Query: 250 IDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKP 309
I YAK G + +A KLF ++ ++++SWTS+I G+++ EAV+ F M +KP
Sbjct: 287 IMGYAKVGNLVAAKKLFNEM--PSRDVISWTSMIIGYSLAKQHAEAVKLFQEMMVSMVKP 344
Query: 310 NRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKT 369
+ +T + L+AC+H G ++ G D + + ++ D+ LIDM + G +E+A +
Sbjct: 345 DEITVATALSACAHLGSLDAGEAVHD-YIRKHDIKSDVFVGNSLIDMYCKCGVVEKALQV 403
Query: 370 ALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILE 408
+ + D V W +++ + +G E V ++L+
Sbjct: 404 FNDMKTR--DSVSWTSIISGLAVNGFAESALNVFDQMLK 440
>gi|147864534|emb|CAN78385.1| hypothetical protein VITISV_017238 [Vitis vinifera]
Length = 643
Score = 262 bits (670), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 134/340 (39%), Positives = 210/340 (61%), Gaps = 5/340 (1%)
Query: 115 LVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSW 174
++N Y +G + ++ +LFDEMPERNLV+WN M++G VK G +E A LF EMPCR+VVSW
Sbjct: 103 IINGYAIVGKIDEAKRLFDEMPERNLVSWNSMLSGFVKCGNVEEAFGLFSEMPCRDVVSW 162
Query: 175 TGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGE 234
++ Y + + NEALALF +M A +P+E T++++L A G + +H Y
Sbjct: 163 NSMLACYAQCGKPNEALALFDQMRAVG-VKPTEATVVSLLSACAHLGALDKGLHLHTYIN 221
Query: 235 KRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKE 294
I V L+D YAKCG I A+++F ++E K++++W +II+G A+HG KE
Sbjct: 222 DNRIEVNSI-VGTALVDMYAKCGKISLATQVFN--AMESKDVLAWNTIIAGMAIHGHVKE 278
Query: 295 AVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLI 354
A + F M++ ++PN +TF+++L+ACSH G+V+EG D M + P ++HY C+I
Sbjct: 279 AQQLFKEMKEASVEPNDITFVAMLSACSHAGMVDEGQKLLDCMSSSYGIEPKVEHYDCVI 338
Query: 355 DMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYG 414
D+L RAG LE+A + +P E + LLG C HGN E+GE V ++++ ++ +
Sbjct: 339 DLLARAGLLEEAMELIGTMPMEPNPSALG-ALLGGCRIHGNFELGEMVGKRLINLQPCHS 397
Query: 415 GDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
G Y+L+ NI A ++ DA ++R +M KVPG S++
Sbjct: 398 GRYILLSNIYAAAKKWDDARKVRNLMKVNGISKVPGVSVI 437
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 92/338 (27%), Positives = 169/338 (50%), Gaps = 54/338 (15%)
Query: 75 FTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDE 134
TY F+I+ C S G +H + K GF+ Y+ +L+++Y + L + +LF
Sbjct: 1 MTYPFVIKACNESSVTWFGLLVHTHVVKSGFECDSYIVNSLIHLYANGKDLGAAKQLFSL 60
Query: 135 MPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALF 194
+R++V+WN MI G VK GE+ R +F+ M CR+V+SW II+GY + + +EA LF
Sbjct: 61 CSDRDVVSWNAMIDGYVKRGEMGHTRMVFDRMVCRDVISWNTIINGYAIVGKIDEAKRLF 120
Query: 195 RKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYA 254
+M +R ++ N ++ +
Sbjct: 121 DEM------------------------------------PERNLVSW-----NSMLSGFV 139
Query: 255 KCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTF 314
KCG + A LF ++ +++VSW S+++ +A G EA+ F +M+ VG+KP T
Sbjct: 140 KCGNVEEAFGLFSEMPC--RDVVSWNSMLACYAQCGKPNEALALFDQMRAVGVKPTEATV 197
Query: 315 LSVLNACSHGGLVEEGLNFF----DKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTA 370
+S+L+AC+H G +++GL+ D +E ++ L+DM + G++ A +
Sbjct: 198 VSLLSACAHLGALDKGLHLHTYINDNRIEVNSIVGT-----ALVDMYAKCGKISLATQVF 252
Query: 371 LGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILE 408
+ S+ DV+ W T++ + HG+V+ +++ +++ E
Sbjct: 253 NAMESK--DVLAWNTIIAGMAIHGHVKEAQQLFKEMKE 288
>gi|297599966|ref|NP_001048246.2| Os02g0769900 [Oryza sativa Japonica Group]
gi|46805413|dbj|BAD16915.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|255671273|dbj|BAF10160.2| Os02g0769900 [Oryza sativa Japonica Group]
Length = 438
Score = 262 bits (670), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 147/393 (37%), Positives = 234/393 (59%), Gaps = 10/393 (2%)
Query: 66 SPLPPLFDSFTYSFLIRTCA-TLSHP---NLGTQLHAVISKVGFQSHVYVNTALVNMYVS 121
SP P+ + T ++ CA + S P L +HA + K+ F SH+ ++T LV Y +
Sbjct: 4 SPAAPVPNDVTLLTVLSACADSPSSPLARRLALSVHARVLKL-FPSHLLLSTCLVRFYFA 62
Query: 122 LGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGY 181
+ +LFD MP R+ VT+N +I+GL++ G + A +F+ MP + VSWT +IDG
Sbjct: 63 SRLPHLALQLFDAMPVRSAVTYNTVISGLMRNGLVAAAFEVFDGMPAPDKVSWTALIDGC 122
Query: 182 TRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAF 241
+ R +EA+ FR M+ + EP +T++AV+ A + G + +H ++G
Sbjct: 123 VKNGRHDEAIDCFRAML-LDGVEPDYVTLIAVISACAEVGALGLGMWVHRLVVRQGLER- 180
Query: 242 DIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGR 301
++R+ N LID YA+CG + A ++F + ++ +VSW S+I GFA +G +AVE+F
Sbjct: 181 NVRIANSLIDMYARCGQVELARQVFS--GMRKRTVVSWNSMIVGFAANGRCADAVEHFEA 238
Query: 302 MQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAG 361
M++ G KP+ VTF VL ACSHGGL +EGL ++D M E + ++HYGC++D+LGR+G
Sbjct: 239 MRREGFKPDAVTFTGVLTACSHGGLTDEGLRYYDLMRAEYGIAARMEHYGCVVDLLGRSG 298
Query: 362 RLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMY 421
+LE+A + +P +VV+ LL C HG+V M E++ + +LE++ G +YVL+
Sbjct: 299 QLEEAMRVVTTMPMRPNEVVLG-ALLAGCRMHGDVGMAEQLMQHLLELDPGGDANYVLLS 357
Query: 422 NILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
NI A VG++ A ++R +M R K PG S V
Sbjct: 358 NIYAAVGKWDGAGKVRSLMKARGLRKRPGYSAV 390
>gi|449519454|ref|XP_004166750.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g22410, mitochondrial-like [Cucumis sativus]
Length = 552
Score = 262 bits (670), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 146/411 (35%), Positives = 232/411 (56%), Gaps = 13/411 (3%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+N+++ Y +K L++++Q I + DS T I LS +G
Sbjct: 141 WNSIICGYYQFNRFKKVLDLFREMQAINVRA--------DSVTMMKAISATCFLSEWEMG 192
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
L I + G +Y+ L++MY G + + ++F +M E+N+V+WN MI G K
Sbjct: 193 DYLVKYIDEHGVVVDLYLGNTLIDMYGRRGMIDFAGRVFYQMKEKNIVSWNAMIMGYAKV 252
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
G L A+ LF EMP R+V+SWT +I GY+ + EA+ LF++M+ +P EIT+
Sbjct: 253 GNLVAAKKLFNEMPSRDVISWTSMIIGYSLAKQHAEAVKLFQEMMV-SMVKPDEITVATA 311
Query: 214 LPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVER 273
L A G + + + +H Y K + D+ V N LID Y KCG + A ++F D+ +
Sbjct: 312 LSACAHLGSLDAGEAVHDYIRKHDIKS-DVFVGNSLIDMYCKCGVVEKALQVFNDM--KT 368
Query: 274 KNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNF 333
++ VSWTSIISG A++G + A+ F +M K G+ P TF+ VL AC+H GLV++G+
Sbjct: 369 RDSVSWTSIISGLAVNGFAESALNVFDQMLKEGICPTHGTFVGVLLACAHVGLVDKGVEH 428
Query: 334 FDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFH 393
F M + P++KHYGC++D+L R+G L+ A +P + DVV+WR LL AC H
Sbjct: 429 FKSMENTYRLAPEMKHYGCVVDLLCRSGYLDMAYNFIKKMPI-VPDVVIWRILLSACKLH 487
Query: 394 GNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERN 444
GN+ + E V++K+L ++ G+YVL + AG R+ D ++R++M+ N
Sbjct: 488 GNLVLAEIVSKKLLVLDPSNNGNYVLSSSTYAGSDRWDDVIKIRKLMEVTN 538
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 123/455 (27%), Positives = 201/455 (44%), Gaps = 103/455 (22%)
Query: 1 MHILQNSQTPNNITTQIHSHLLTTNSLLHHSQLFNT-----------LLHFYSLAESPQK 49
MHI P++I+ I + L+ SL +FN ++H S ++ P
Sbjct: 1 MHI-----DPSSISEVIKHYALSPQSLPKAHFVFNQIQRPTLLVWNHMIHGLSKSDRPND 55
Query: 50 AF-----LLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVG 104
A + YK +Q SH T+ FL ++CA +S G + K+G
Sbjct: 56 AIHFYNTMYYKGIQG----SH---------LTFIFLFKSCARVSDVRQGQMVRVHSMKLG 102
Query: 105 FQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFE 164
F+S +V+ AL++MYV +GEL A+ +F+
Sbjct: 103 FESXSFVSNALIHMYVC-------------------------------FGELAMAQKVFD 131
Query: 165 EMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAI-----WQ 219
M R+VVSW II GY + NR + L LFR+M A S +T++ + A W+
Sbjct: 132 GMLERDVVSWNSIICGYYQFNRFKKVLDLFREMQAINVRADS-VTMMKAISATCFLSEWE 190
Query: 220 NGD--VKSCQ-------------LIHGYGEKRGFTAFDIRVL-----------NCLIDTY 253
GD VK LI YG +RG F RV N +I Y
Sbjct: 191 MGDYLVKYIDEHGVVVDLYLGNTLIDMYG-RRGMIDFAGRVFYQMKEKNIVSWNAMIMGY 249
Query: 254 AKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVT 313
AK G + +A KLF ++ ++++SWTS+I G+++ EAV+ F M +KP+ +T
Sbjct: 250 AKVGNLVAAKKLFNEM--PSRDVISWTSMIIGYSLAKQHAEAVKLFQEMMVSMVKPDEIT 307
Query: 314 FLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGI 373
+ L+AC+H G ++ G D + + ++ D+ LIDM + G +E+A + +
Sbjct: 308 VATALSACAHLGSLDAGEAVHD-YIRKHDIKSDVFVGNSLIDMYCKCGVVEKALQVFNDM 366
Query: 374 PSEITDVVVWRTLLGACSFHGNVEMGERVTRKILE 408
+ D V W +++ + +G E V ++L+
Sbjct: 367 KTR--DSVSWTSIISGLAVNGFAESALNVFDQMLK 399
>gi|357464703|ref|XP_003602633.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355491681|gb|AES72884.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 647
Score = 262 bits (669), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 154/455 (33%), Positives = 236/455 (51%), Gaps = 36/455 (7%)
Query: 31 SQLFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPP-------------------- 70
++ +NTLL FYS +A+ L+ ++ Q S++ L
Sbjct: 144 TRTWNTLLSFYSKKGVFNQAYKLFDEMPQRNLVSYNSLISGLTRHEFHKEAVKFFREMQN 203
Query: 71 -----LFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFL 125
+ D FT L+ C+ L Q+H V + VGF++++ +N AL++ Y G
Sbjct: 204 GVGGLMLDEFTLVSLVSNCSCLDTVKWLRQVHGVATIVGFRTNLILNNALIDAYGKCGEP 263
Query: 126 KDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMN 185
S LF M E++ V+W M+ + ++ A +F EMP + VSW +I G+ +
Sbjct: 264 NSSFCLFRSMVEKDAVSWTSMVVTYTRASRIDDACKVFNEMPVKYTVSWAALISGFVKNG 323
Query: 186 RSNEALALFRKMVACEYTEPSEITILAVLPA-----IWQNGDVKSCQLIHGYGEKRGFTA 240
R EAL +F +M+ E P T ++VL A + G CQ+I G +
Sbjct: 324 RCYEALEVFHQMIK-EGVLPRAQTFVSVLDACASEALIGRGKQVHCQIIRG---RSSDNL 379
Query: 241 FDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFG 300
F++ V N L+D YAKCG + SA LFE + + K++VSW ++I+GFA +G G++++ F
Sbjct: 380 FNVYVFNALMDMYAKCGDMKSAENLFE-MMIHVKDVVSWNTLITGFAQNGRGEDSLAVFD 438
Query: 301 RMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRA 360
RM + ++PN VTFL VL+AC+H GLV GL D M V P HY LID+LGR
Sbjct: 439 RMIESNIEPNHVTFLGVLSACNHAGLVNAGLELLDSMERRYGVKPKSNHYALLIDLLGRK 498
Query: 361 GRLEQAEKTALGIPSEITD-VVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVL 419
RLE+A +P+EI++ + +W +LG C HGN+E+ + + +E G YV+
Sbjct: 499 NRLEEAMCLIEKVPNEISNHIAMWGAVLGGCRVHGNLELARKAAEALFALEPENTGRYVM 558
Query: 420 MYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
+ NI A GR+ D R+R VM ER K P S +
Sbjct: 559 LSNIYAASGRWSDTNRIRNVMKERGLKKEPAFSRI 593
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 104/366 (28%), Positives = 169/366 (46%), Gaps = 38/366 (10%)
Query: 77 YSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMP 136
+S LI C + G LH+ + K ++ L+++Y G + K FD++P
Sbjct: 81 FSSLISNCVSAKSLKHGKALHSQLIKTALFFETFLANGLIDLYSKCGCKESIHKAFDDLP 140
Query: 137 ERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRK 196
+ TWN +++ K G A LF+EMP RN+VS+ +I G TR EA+ FR+
Sbjct: 141 NKTTRTWNTLLSFYSKKGVFNQAYKLFDEMPQRNLVSYNSLISGLTRHEFHKEAVKFFRE 200
Query: 197 MV-ACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAK 255
M E T+++++ VK + +HG GF ++ + N LID Y K
Sbjct: 201 MQNGVGGLMLDEFTLVSLVSNCSCLDTVKWLRQVHGVATIVGFRT-NLILNNALIDAYGK 259
Query: 256 CG------CIF-------------------------SASKLFEDISVERKNLVSWTSIIS 284
CG C+F A K+F ++ V K VSW ++IS
Sbjct: 260 CGEPNSSFCLFRSMVEKDAVSWTSMVVTYTRASRIDDACKVFNEMPV--KYTVSWAALIS 317
Query: 285 GFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMV--EECE 342
GF +G EA+E F +M K G+ P TF+SVL+AC+ L+ G +++ +
Sbjct: 318 GFVKNGRCYEALEVFHQMIKEGVLPRAQTFVSVLDACASEALIGRGKQVHCQIIRGRSSD 377
Query: 343 VLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERV 402
L ++ + L+DM + G ++ AE + + DVV W TL+ + +G E V
Sbjct: 378 NLFNVYVFNALMDMYAKCGDMKSAE-NLFEMMIHVKDVVSWNTLITGFAQNGRGEDSLAV 436
Query: 403 TRKILE 408
+++E
Sbjct: 437 FDRMIE 442
>gi|218199092|gb|EEC81519.1| hypothetical protein OsI_24907 [Oryza sativa Indica Group]
Length = 460
Score = 262 bits (669), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 153/429 (35%), Positives = 236/429 (55%), Gaps = 48/429 (11%)
Query: 25 NSLLHHSQL----FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFL 80
+ LL H L NT+L + + P+ A L+++ L D+ TY L
Sbjct: 74 SRLLPHGPLDPFPLNTVLRIAAGSPRPRVALELHRRRLA-----------LPDTHTYPPL 122
Query: 81 IRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNL 140
++ CA L G LHA +K GF + V+V +LV++Y + G + + K+FDEMP R
Sbjct: 123 LQACARLLALREGECLHAEAAKNGFVTLVFVQNSLVHLYGACGLFESAHKVFDEMPVRG- 181
Query: 141 VTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVAC 200
RN+VSW +++ + R NE L +F +M+
Sbjct: 182 ----------------------------RNLVSWNSMLNSFAANGRPNEVLTVFWEMLGV 213
Query: 201 EYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIF 260
++ P TI++VL A + G + + +H Y EK G + V N LID YAKCG +
Sbjct: 214 DFA-PDGFTIVSVLTACAEFGALALGRRVHVYVEKVGLVE-NSHVSNALIDLYAKCGSVN 271
Query: 261 SASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNA 320
A ++FE++ + R +VSWTS+I G A +G GKEA+E F M++ L P +T + VL A
Sbjct: 272 DARRIFEEMGLGR-TVVSWTSLIVGLAANGFGKEALELFSLMEREKLVPTEITMVGVLYA 330
Query: 321 CSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDV 380
CSH GLV++G +FD+M E+ + P I+H GC++D+LGRAGR+E+A + +P E +
Sbjct: 331 CSHCGLVDDGFRYFDRMKEDYGISPRIEHLGCMVDLLGRAGRVEEAYDYIITMPLE-PNA 389
Query: 381 VVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVM 440
VVWRTLLG+C+ H +E+G+ +++E++ G+ GDYVL+ N+ A VG + D LR+ M
Sbjct: 390 VVWRTLLGSCAMHKKLELGKVAWERLVELDPGHSGDYVLLSNLYAAVGMWADVHVLRKTM 449
Query: 441 DERNAFKVP 449
+ K P
Sbjct: 450 VKDRVRKNP 458
>gi|224056897|ref|XP_002299078.1| predicted protein [Populus trichocarpa]
gi|222846336|gb|EEE83883.1| predicted protein [Populus trichocarpa]
Length = 488
Score = 262 bits (669), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 140/450 (31%), Positives = 244/450 (54%), Gaps = 25/450 (5%)
Query: 16 QIHSHLLTTNSLLHHSQLFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLF--- 72
Q+H+ + + L +H LL Y AF +++++ P P +F
Sbjct: 31 QLHAQFVVSGLLGYHPLCARRLLEAYVTMSQIYYAFSIFERI---------PSPDVFVYN 81
Query: 73 --------DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGF 124
D+FTY+F+++ C+ L P G Q+H I K G +++++L++MY + G
Sbjct: 82 TMIRGLTMDNFTYTFVLKACSHLKAPFEGKQVHCQIIKAGIVPDTHIHSSLIHMYTNSGS 141
Query: 125 LKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRM 184
+ D+ ++ E E N + N MI+G + G ++ AR +F++M ++ SW+ +I GYT+
Sbjct: 142 IDDAERVLGEFSEENTLAKNAMISGYLTEGRVDKARKMFDDMAAKDAASWSALITGYTKN 201
Query: 185 NRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIR 244
EALALF+ M+ + P+E ++++L A Q G + + IH Y +K +
Sbjct: 202 GMHTEALALFQDMMV-SHILPNEAALVSLLSACGQLGTLHQGRWIHAYIDKTR-VLMSTK 259
Query: 245 VLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQK 304
+ LID YAK G I LF+ ++ R+++V+W +IS FA+HG + + F M
Sbjct: 260 LTTALIDMYAKSGSIECGYGLFQKMA--RRDVVTWGVMISAFAIHGHASKCFQLFDEMLA 317
Query: 305 VGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLE 364
G++PN+V F+++L+ACSH G VEEG +F +M + P I+HYGC++D+LGRAG L
Sbjct: 318 DGIRPNKVIFVAILSACSHAGCVEEGRQYFSQMEHGFGIKPSIEHYGCMVDLLGRAGLLA 377
Query: 365 QAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNIL 424
AE+ L +P + + ++W +LLGAC H +++ G ++E+E G + L +
Sbjct: 378 DAEQLILSMPKQ-PNSIIWGSLLGACRTHNDLKRGTWAFENLMELEPTSGDRHKLAGLMF 436
Query: 425 AGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
A G +A ++R+++ E+ G S +
Sbjct: 437 ANAGEKEEAAKIRKMIHEKEMVTTCGSSFI 466
>gi|297740786|emb|CBI30968.3| unnamed protein product [Vitis vinifera]
Length = 1434
Score = 261 bits (668), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 146/375 (38%), Positives = 218/375 (58%), Gaps = 36/375 (9%)
Query: 80 LIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERN 139
+ R A L G ++H++ + GF+S V+V LV+MY + G + + KLF+ M ERN
Sbjct: 1 MQRAIAKLMDVREGEKVHSIAIRNGFESLVFVQNTLVHMYAACGHAESAHKLFELMAERN 60
Query: 140 LVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVA 199
LVTWN +I G Y R NEAL LFR+M
Sbjct: 61 LVTWNSVING-------------------------------YALNGRPNEALTLFREM-G 88
Query: 200 CEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCI 259
EP T++++L A + G + + H Y K G ++ N L+D YAKCG I
Sbjct: 89 LRGVEPDGFTMVSLLSACAELGALALGRRAHVYMVKVGLDG-NLHAGNALLDLYAKCGSI 147
Query: 260 FSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLN 319
A K+F+++ E K++VSWTS+I G A++G GKEA+E F +++ GL P+ +TF+ VL
Sbjct: 148 RQAHKVFDEM--EEKSVVSWTSLIVGLAVNGFGKEALELFKELERKGLMPSEITFVGVLY 205
Query: 320 ACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITD 379
ACSH G+V+EG ++F +M EE ++P I+HYGC++D+LGRAG ++QA + +P + +
Sbjct: 206 ACSHCGMVDEGFDYFKRMKEEYGIVPKIEHYGCMVDLLGRAGLVKQAHEFIQNMPMQ-PN 264
Query: 380 VVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRV 439
VVWRTLLGAC+ HG++ +GE ++L++E + GDYVL+ N+ A R+ D ++RR
Sbjct: 265 AVVWRTLLGACTIHGHLALGEVARAQLLQLEPKHSGDYVLLSNLYASEQRWSDVHKVRRT 324
Query: 440 MDERNAFKVPGCSLV 454
M K PG SLV
Sbjct: 325 MLREGVKKTPGHSLV 339
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 45/277 (16%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+N++++ Y+L P +A L++++ D FT L+ CA L LG
Sbjct: 64 WNSVINGYALNGRPNEALTLFREMGLRGVEP--------DGFTMVSLLSACAELGALALG 115
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
+ H + KVG +++ AL+++Y G ++ + K+FDEM E+++V+W +I GL
Sbjct: 116 RRAHVYMVKVGLDGNLHAGNALLDLYAKCGSIRQAHKVFDEMEEKSVVSWTSLIVGLA-- 173
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
++G+ + EAL LF+++ + PSEIT + V
Sbjct: 174 ------------------------VNGFGK-----EALELFKELER-KGLMPSEITFVGV 203
Query: 214 LPAIWQNGDV-KSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVE 272
L A G V + E+ G I C++D + G + A + +++ ++
Sbjct: 204 LYACSHCGMVDEGFDYFKRMKEEYGIVP-KIEHYGCMVDLLGRAGLVKQAHEFIQNMPMQ 262
Query: 273 RKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKP 309
N V W +++ +H G A+ R Q + L+P
Sbjct: 263 -PNAVVWRTLLGACTIH--GHLALGEVARAQLLQLEP 296
>gi|296081589|emb|CBI20594.3| unnamed protein product [Vitis vinifera]
Length = 572
Score = 261 bits (668), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 148/440 (33%), Positives = 237/440 (53%), Gaps = 48/440 (10%)
Query: 17 IHSHLLTTNSLLHHSQLFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFT 76
I +HL + N H++ L +LA++ + +Q SP P D FT
Sbjct: 46 IFAHLASPNIFAHNATL-------KALAQNSH----WFHAIQFFNHQVSSPNAPNPDEFT 94
Query: 77 YSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMP 136
++ +++ CA L+H G ++HA+++K GF+S+++V +L++MY G+
Sbjct: 95 FTSVLKACAGLAHVVNGQKIHAMVTKQGFESNLFVRNSLIDMYFKAGY------------ 142
Query: 137 ERNLVTWNVMITGLVKWGELEFARSLFEEMPCR--NVVSWTGIIDGYTRMNRSNEALALF 194
L AR LF+EM R NVV W +I GY + + ++A+ +F
Sbjct: 143 -------------------LLLARHLFDEMFVRDRNVVCWNAMIAGYAQNEKYSDAIEVF 183
Query: 195 RKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYA 254
R M P+++T+++VLPA G + + I G+ +R A + + N L D YA
Sbjct: 184 RMMQQFGGVVPNDVTLVSVLPACAHLGALDLGKWIDGFISRREM-ALGLFLGNALADMYA 242
Query: 255 KCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTF 314
KCGCI A ++F +E ++++SW+ II G AM+G EA F M G KPN V F
Sbjct: 243 KCGCITEARRVFN--KMEERDVISWSIIICGLAMYGHADEAFGCFYEMLDCGEKPNDVVF 300
Query: 315 LSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIP 374
+ +L AC+H GLV++GLN F+ M +E V P ++HYGC++D+L RAG L++AE +P
Sbjct: 301 MGLLTACTHAGLVKKGLNCFNTMDKEYGVSPKVEHYGCVVDLLSRAGELDKAEDMISSMP 360
Query: 375 SEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAE 434
+ +V++W LLG C + + G+RV + ILE++ + G YV + N+ + +GR DA
Sbjct: 361 MK-PNVIIWGALLGGCRIYRDSGRGQRVVQHILELDSDHSGSYVYLANVYSSMGRLDDAA 419
Query: 435 RLRRVMDERNAFKVPGCSLV 454
+ R M E K PGCS +
Sbjct: 420 KCRLRMRENGVLKTPGCSWI 439
>gi|147811906|emb|CAN68178.1| hypothetical protein VITISV_000846 [Vitis vinifera]
Length = 633
Score = 261 bits (668), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 153/470 (32%), Positives = 256/470 (54%), Gaps = 59/470 (12%)
Query: 17 IHSHLLTTNSLLHHSQLFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFT 76
+++ + ++ + + + NT++ Y+ + P KA LY + + S D F
Sbjct: 57 VYAQAIFEDTTMDNPFVCNTMIRAYAKSVFPIKAIYLYNFMHRKDIKS--------DHFM 108
Query: 77 YSFLIRTCATLSHPN-------------LGTQLHAVISKVGFQSHVYVNTALVNMYVSLG 123
Y F ++ CA + N G ++H + ++G ++ +LV +Y G
Sbjct: 109 YPFGLKACARVLWCNEGDIKCTQLDIACKGAEIHCRLFRLGLDQDCFIQNSLVYLYSQCG 168
Query: 124 FLKDSSKLFDEMPERNLVTWNVMITG---------------------LVKW--------- 153
FL + ++FDEM E+ + +WNVMI+ +V W
Sbjct: 169 FLDLARRVFDEMTEKTITSWNVMISAYDQINDFDSADSLIGSMPGKNVVSWNMLIARYIR 228
Query: 154 -GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILA 212
G++E A+++F+EMP R+ VSW +I GY ++ ALALFR+M E ++IT+++
Sbjct: 229 LGKIEDAKAVFQEMPERDAVSWNSMIAGYVQIKDYARALALFREMEIAN-VEATDITLIS 287
Query: 213 VLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVE 272
VL A + G ++ + IH ++R + + + N L+D YAKCG + A ++F ++ +
Sbjct: 288 VLGACAETGALEIGRKIHLSLKQREYK-IEGYLSNALVDMYAKCGHLNLAWEVFSELKM- 345
Query: 273 RKNLVSWTSIISGFAMHGMGKEAVENFGRMQKV--GLKPNRVTFLSVLNACSHGGLVEEG 330
K++ W ++I A+HG +EA+ F M+ G +PNRVTF+ VL ACSH GLV+EG
Sbjct: 346 -KHISCWNAMIVSLAVHGYCEEALRLFSTMEMSVDGARPNRVTFIGVLIACSHKGLVDEG 404
Query: 331 LNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGAC 390
FF++MV E +++PDIKHYGC++D+L R G L++A +P E + V+WRTLLGAC
Sbjct: 405 RKFFNRMVNEYKIMPDIKHYGCMVDLLSRCGLLKEAHHMIKTMPFE-ANSVLWRTLLGAC 463
Query: 391 SFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVM 440
H +V++ E +++ +ME GDYVL+ NI A R+ D ER +++
Sbjct: 464 RVHHHVDLAEESFQQLGKMEPLRDGDYVLLSNIYAEAQRWNDVERASKIL 513
>gi|357114903|ref|XP_003559233.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Brachypodium distachyon]
Length = 611
Score = 261 bits (668), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 168/487 (34%), Positives = 247/487 (50%), Gaps = 72/487 (14%)
Query: 1 MHILQNSQTPNNI--------TTQIHSHLLTTNSLLHHSQ-----LFNTLLHFYSLAESP 47
+ +L+ S TP ++ + +HS+ L L S L L+ P
Sbjct: 35 LRLLERSSTPASLLQSFAFLLKSGLHSNPLVVTRLFAASASAAPALLEPLVSSLLGPSLP 94
Query: 48 QKAFLLYKQLQQIYTHSHSPLP----------PLF-------DSFTYSFLIRTCATL-SH 89
AFL+ I TH SP P PL + FT+ FL+++CA L
Sbjct: 95 LDAFLVN---TLIRTHVTSPFPSARRRAAAFFPLMLRAAVAPNKFTFPFLLKSCAALPGS 151
Query: 90 PNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLG--FLKDSSKLFDEMPERNLVTWNVMI 147
P++G Q HA K GF + YV+ L++MY G FL D
Sbjct: 152 PDVGLQAHAAALKFGFAADHYVSNTLIHMYSCFGAGFLGD-------------------- 191
Query: 148 TGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSE 207
AR++FE MP + V+W+ +I GY R S++A+ LFR M P E
Sbjct: 192 -----------ARNVFERMPRESAVTWSAMIGGYVRAGLSSDAVVLFRGM-QVSGVRPDE 239
Query: 208 ITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFE 267
+T++ VL A G ++ + + + E+ G + + N LIDT AKCG + A +FE
Sbjct: 240 VTVIGVLAAAADLGALELTRWVGRFVEREGIGK-SVTLCNALIDTLAKCGDVDGAVAVFE 298
Query: 268 DISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLV 327
+E + +VSWTS+I AM G GKEAV F M+ VG+ P+ V F+ VL ACSH G+V
Sbjct: 299 --GMEERTVVSWTSVIDALAMEGRGKEAVGVFEEMKAVGVLPDDVAFIGVLTACSHAGMV 356
Query: 328 EEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLL 387
+EG +FD M E + P I+HYGC++DM GRAG +EQ + +P + + ++WRTL+
Sbjct: 357 DEGRGYFDSMKTEYGIEPKIEHYGCMVDMFGRAGMVEQGLEFVRAMPMK-PNPIIWRTLV 415
Query: 388 GACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFK 447
AC HG +E+GE +TR +L + +YV++ N+ A R+ + +RR M +R K
Sbjct: 416 AACRAHGRLELGESITRNLLNEFPAHEANYVMLSNVYALTQRWKEKSEIRREMSKRGIKK 475
Query: 448 VPGCSLV 454
VPGCSLV
Sbjct: 476 VPGCSLV 482
>gi|356533546|ref|XP_003535324.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09190-like [Glycine max]
Length = 483
Score = 261 bits (668), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 150/439 (34%), Positives = 242/439 (55%), Gaps = 17/439 (3%)
Query: 14 TTQIHSHLLTTNSLLHHSQLFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFD 73
T++ +H N LL FN ++ +SL +F + ++ T + SP D
Sbjct: 59 ATRLFAHTHNPNILL-----FNAIIKAHSLHPPFHASFSFFSLMK---TRAISP-----D 105
Query: 74 SFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFD 133
+T + L ++ + L + LG +HA + ++GF H V A + +Y S + D+SK+FD
Sbjct: 106 EYTLAPLFKSASNLRYYVLGGCVHAHVVRLGFTRHASVRVAALEVYASCERMGDASKVFD 165
Query: 134 EMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALAL 193
EM + ++V WN+MI G K G+LE +F +M R VVSW ++ + N+ +AL L
Sbjct: 166 EMRDPDVVVWNLMIRGFCKMGDLETGMKVFGQMKERTVVSWNLMMSCLAKNNKEEKALEL 225
Query: 194 FRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTY 253
F +M+ + EP + +++ VLP + G V + IH Y +GF I V N L+D Y
Sbjct: 226 FNEMLEQGF-EPDDASLVTVLPVCARLGAVDIGEWIHSYANSKGFLQDTINVGNSLVDFY 284
Query: 254 AKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVT 313
KCG + +A +F D++ KN+VSW ++ISG A +G G+ V F M G +PN T
Sbjct: 285 CKCGNLQAAWSIFNDMA--SKNVVSWNAMISGLAYNGEGEVGVNLFEEMVHGGFEPNDST 342
Query: 314 FLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGI 373
F+ VL C+H GLV+ G + F M + +V P ++HYGC++D+LGR G + +A +
Sbjct: 343 FVGVLACCAHVGLVDRGRDLFASMSVKFKVSPKLEHYGCVVDLLGRCGHVREARDLITSM 402
Query: 374 PSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDA 433
P + T +W LL AC +G+ E+ E ++++ +E G+YVL+ N+ A GR+ +
Sbjct: 403 PLKPT-AALWGALLSACRTYGDREIAENAAKELVRLEPWNSGNYVLLSNVYAEEGRWDEV 461
Query: 434 ERLRRVMDERNAFKVPGCS 452
E++R +M KVPG S
Sbjct: 462 EKVRVLMRGGGVKKVPGQS 480
>gi|225463844|ref|XP_002265179.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 617
Score = 261 bits (667), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 163/494 (32%), Positives = 251/494 (50%), Gaps = 85/494 (17%)
Query: 33 LFNTLLHFYSLAESPQ-KAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPN 91
L+N ++ + + + + ++YKQ+ S +P D++T F+++ CA
Sbjct: 91 LYNAIIRGLATSNNDSIEGLVVYKQML-----SKGIVP---DNYTIPFVLKACAESRAVR 142
Query: 92 LGTQLHAVISKVGFQSHVYVNTALVNMY-------------------------------V 120
G ++H K+G S VYV+ L+ MY V
Sbjct: 143 EGEEVHGQAIKMGLASDVYVSNTLMRMYAVCDVIRSARKVFDTSPQRDLVSWTTMIQGYV 202
Query: 121 SLGFLKDSSKLFDEMPERNL---------------------------------------- 140
+GF ++ LF EM NL
Sbjct: 203 KMGFAREGVGLFFEMCGENLQADGMTLVIVLSSCARLGDLRLGRKLHRYIIRNSNVNLDV 262
Query: 141 VTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVAC 200
N ++ +K G+ FAR +F+EMP +NVVSW +I G + + E+L +FRKM
Sbjct: 263 FVGNALVDMYLKCGDANFARKVFQEMPVKNVVSWNSMISGLAQKGQFKESLYMFRKMQRL 322
Query: 201 EYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIF 260
+P ++T++AVL + G ++ + +H Y ++ A D + N L+D YAKCG I
Sbjct: 323 G-VKPDDVTLVAVLNSCANLGVLELGKWVHAYLDRNQIRA-DGFIGNALVDMYAKCGSID 380
Query: 261 SASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNA 320
A +F+ ++ RK++ S+T++I G AMHG G +A++ F M K+G++P+ VTF+ VL A
Sbjct: 381 QACWVFQ--AMNRKDVYSYTAMIVGLAMHGQGGKALDLFSEMPKMGIEPDEVTFVGVLTA 438
Query: 321 CSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDV 380
CSH GLVEEG +F+ M + P ++HYGC++D+LGRAG + +AE+ +P E D
Sbjct: 439 CSHVGLVEEGRKYFEDMSTIYNLRPQLEHYGCMVDLLGRAGLINEAEEFIRNMPIE-PDA 497
Query: 381 VVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVM 440
V LLGAC HG VE+GE V +KI ++E G YVLM NI + R+ DA +LR+ M
Sbjct: 498 FVLGALLGACKIHGKVELGESVMKKIEKIEPRKDGAYVLMSNIYSSANRWRDALKLRKTM 557
Query: 441 DERNAFKVPGCSLV 454
ERN K PGCS +
Sbjct: 558 KERNLEKTPGCSSI 571
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 131/275 (47%), Gaps = 9/275 (3%)
Query: 158 FARSLFEEMPCRNVVSWTGIIDGY-TRMNRSNEALALFRKMVACEYTEPSEITILAVLPA 216
+A SL ++ N+ + II G T N S E L ++++M++ + P TI VL A
Sbjct: 76 YALSLLAQLRTPNLPLYNAIIRGLATSNNDSIEGLVVYKQMLS-KGIVPDNYTIPFVLKA 134
Query: 217 IWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNL 276
++ V+ + +HG K G A D+ V N L+ YA C I SA K+F D S +R +L
Sbjct: 135 CAESRAVREGEEVHGQAIKMGL-ASDVYVSNTLMRMYAVCDVIRSARKVF-DTSPQR-DL 191
Query: 277 VSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDK 336
VSWT++I G+ G +E V F M L+ + +T + VL++C+ G + G
Sbjct: 192 VSWTTMIQGYVKMGFAREGVGLFFEMCGENLQADGMTLVIVLSSCARLGDLRLGRKLHRY 251
Query: 337 MVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNV 396
++ V D+ L+DM + G A K +P + +VV W +++ + G
Sbjct: 252 IIRNSNVNLDVFVGNALVDMYLKCGDANFARKVFQEMP--VKNVVSWNSMISGLAQKGQF 309
Query: 397 EMGERVTRKILEMERGYGGDYVLMYNILAGVGRFG 431
+ + RK+ + G D V + +L G
Sbjct: 310 KESLYMFRKMQRL--GVKPDDVTLVAVLNSCANLG 342
>gi|449528479|ref|XP_004171232.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04750,
mitochondrial-like [Cucumis sativus]
Length = 586
Score = 261 bits (666), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 149/382 (39%), Positives = 218/382 (57%), Gaps = 6/382 (1%)
Query: 73 DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLF 132
D FT L+ C L LG +HA I K S++ + AL++MYV LK + K+F
Sbjct: 163 DDFTMLGLLLLCGQLGETKLGKSVHAQIEKSIGSSNLILYNALLDMYVKCNELKLARKVF 222
Query: 133 DEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALA 192
D E++ V+WN +I G K GELE A LF ++P R++VSW +I GY +
Sbjct: 223 DGPMEKDTVSWNTIIAGYAKVGELELACDLFNQIPTRDIVSWNSLISGYAQNGDYVTVKC 282
Query: 193 LFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDT 252
LF +M A E +P ++TI+ ++ A+ + G + + IHG K T + + LID
Sbjct: 283 LFTRMFA-ENVKPDKVTIVNLISAVAEMGALDQGRWIHGLAVKM-LTKIEAFSGSALIDM 340
Query: 253 YAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRV 312
Y KCG I A +F I K++ +WT++I+GFA HG G +A+E F MQ KPN V
Sbjct: 341 YCKCGSIERAFVIFNQIP--EKDVTTWTTMITGFAFHGFGNKALELFSVMQ-AETKPNDV 397
Query: 313 TFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALG 372
TF+SVL ACSH GLV+EGL F M + + P ++HYGCL+D+L R+GRL A
Sbjct: 398 TFVSVLAACSHSGLVDEGLKIFSSMKKRYSIEPGVEHYGCLVDLLCRSGRLLDAIGVIEK 457
Query: 373 IPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGD 432
+P E + +W +L AC H N+E+ ER ++L++E G Y+L+ N+ A GR+
Sbjct: 458 MPMEPSR-SIWGAVLSACRMHRNMELAERALMELLKLEPEKEGGYILLSNVYATCGRWSY 516
Query: 433 AERLRRVMDERNAFKVPGCSLV 454
++ +R VM+ R K+ GCS V
Sbjct: 517 SDSIREVMNSRGVKKIAGCSSV 538
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 102/370 (27%), Positives = 172/370 (46%), Gaps = 35/370 (9%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNL 92
+FNT++ + S +KAF +Y+ + Q T+ D T+ +L++T ++
Sbjct: 34 IFNTMILGFPF--SNEKAFTIYRSMLQNGTYP--------DRQTFLYLLQTTKFVAEVK- 82
Query: 93 GTQLHAVISKVGFQS-HVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLV 151
Q+H G S Y+ +L+ YV G + + +LFDEM +RN+V++N MI G
Sbjct: 83 --QIHCHALVFGLLSKEEYLRNSLIKRYVDNGCFECARQLFDEMSDRNVVSYNTMILGFA 140
Query: 152 KWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVA-CEYTEPSEITI 210
K G + LF +M + + G + L + + A E + S I
Sbjct: 141 KVGNILGILELFHDMRSHGLEPDDFTMLGLLLLCGQLGETKLGKSVHAQIEKSIGSSNLI 200
Query: 211 L--AVLPAIWQNGDVK-SCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFE 267
L A+L + ++K + ++ G EK D N +I YAK G + A LF
Sbjct: 201 LYNALLDMYVKCNELKLARKVFDGPMEK------DTVSWNTIIAGYAKVGELELACDLFN 254
Query: 268 DISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLV 327
I +++VSW S+ISG+A +G F RM +KP++VT +++++A + G +
Sbjct: 255 QIPT--RDIVSWNSLISGYAQNGDYVTVKCLFTRMFAENVKPDKVTIVNLISAVAEMGAL 312
Query: 328 EEGL---NFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWR 384
++G KM+ + E LIDM + G +E+A IP + DV W
Sbjct: 313 DQGRWIHGLAVKMLTKIEAFSG----SALIDMYCKCGSIERAFVIFNQIPEK--DVTTWT 366
Query: 385 TLLGACSFHG 394
T++ +FHG
Sbjct: 367 TMITGFAFHG 376
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 79/274 (28%), Positives = 125/274 (45%), Gaps = 22/274 (8%)
Query: 156 LEFARSLFEEM-PCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVL 214
LE A LF P N+ + +I G+ N +A ++R M+ T P T L +L
Sbjct: 16 LELAILLFNHFTPYPNLYIFNTMILGFPFSNE--KAFTIYRSMLQ-NGTYPDRQTFLYLL 72
Query: 215 PAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERK 274
+VK IH + G + + + N LI Y GC A +LF+++S +
Sbjct: 73 QTTKFVAEVKQ---IHCHALVFGLLSKEEYLRNSLIKRYVDNGCFECARQLFDEMS--DR 127
Query: 275 NLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFF 334
N+VS+ ++I GFA G +E F M+ GL+P+ T L +L C G + G +
Sbjct: 128 NVVSYNTMILGFAKVGNILGILELFHDMRSHGLEPDDFTMLGLLLLCGQLGETKLGKSVH 187
Query: 335 DKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHG 394
+ +E+ ++ Y L+DM + L+ A K G P E D V W T++ + G
Sbjct: 188 AQ-IEKSIGSSNLILYNALLDMYVKCNELKLARKVFDG-PME-KDTVSWNTIIAGYAKVG 244
Query: 395 NVEMG-----ERVTRKIL---EMERGYG--GDYV 418
+E+ + TR I+ + GY GDYV
Sbjct: 245 ELELACDLFNQIPTRDIVSWNSLISGYAQNGDYV 278
>gi|147807930|emb|CAN62155.1| hypothetical protein VITISV_032407 [Vitis vinifera]
Length = 585
Score = 261 bits (666), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 171/548 (31%), Positives = 269/548 (49%), Gaps = 108/548 (19%)
Query: 1 MHILQNSQTPNNITTQIHSHLLTTN-----------------------------SLLHHS 31
+ +LQ S+T + I QIH+ L+TTN + +H
Sbjct: 15 LSLLQXSKTSSQIL-QIHAQLITTNLISDTFAASRLLDSVVSKTLNVNYAELVFAQIHQP 73
Query: 32 QLF--NTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSH 89
F NT++ Y+ + +P++A Y ++++ L D++TY F+++ C +
Sbjct: 74 NSFICNTMVKCYTESSTPERALRFYAEMRK--------KGLLGDNYTYPFVLKACGAMCG 125
Query: 90 PNLGTQLHAVISKVGFQSHVYVNTALVNMY------------------------------ 119
G + K GF V+V L++MY
Sbjct: 126 LLEGGLVQGEAVKRGFGGDVFVVNGLISMYCRCGETGWARAVFDGFSEKDLVSWNSMLGG 185
Query: 120 -VSLGFLKDSSKLFDEMPERNLVTWNVMITG----------------------LVKW--- 153
V G ++++ +FDEMPER++V+W++MI G LV W
Sbjct: 186 YVWCGEMENAQNMFDEMPERDVVSWSIMIDGYGKKMGEVNRARVFFDSMPTRDLVSWNSM 245
Query: 154 -------GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPS 206
GE+E AR +F++M +NV+SW+ +IDGY S EAL LFR+M+ C+ +P
Sbjct: 246 IDGYAKVGEMEVAREIFBKMLQKNVISWSIMIDGYAXHRDSKEALNLFRQML-CQGIKPD 304
Query: 207 EITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLF 266
++++ + A Q G + + IH Y KR DI V L+D Y KCG A +F
Sbjct: 305 RVSVVGAVSACSQLGALDQGRWIHLY-MKRNRMLLDIVVQTALVDMYLKCGSXDEARXIF 363
Query: 267 EDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGL 326
S+ +N+VSW +I G M+G GKEA+E F +M+ + + + FL VL ACSH L
Sbjct: 364 N--SMPERNVVSWNVMIVGLGMNGFGKEALECFXQMEMERIPMDDLLFLGVLMACSHANL 421
Query: 327 VEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTL 386
V EGL+ F++M + P ++HYGCL+D+LGRAG+L+Q + +P + + +W +L
Sbjct: 422 VTEGLHIFNQMKGVYRLEPKLEHYGCLVDLLGRAGQLDQIQNIIQSMPMK-PNAALWGSL 480
Query: 387 LGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAF 446
L AC H NV + E V ++ E++ G YVLM NI A VG + R+R++M ER
Sbjct: 481 LLACRIHQNVTLAEIVVERLAELKADDSGVYVLMSNIYADVGMWEGMLRIRKLMKERKMK 540
Query: 447 KVPGCSLV 454
K G S++
Sbjct: 541 KDIGRSVI 548
>gi|46805412|dbj|BAD16914.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|215704291|dbj|BAG93131.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 527
Score = 261 bits (666), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 146/392 (37%), Positives = 233/392 (59%), Gaps = 10/392 (2%)
Query: 67 PLPPLFDSFTYSFLIRTCA-TLSHP---NLGTQLHAVISKVGFQSHVYVNTALVNMYVSL 122
P P+ + T ++ CA + S P L +HA + K+ F SH+ ++T LV Y +
Sbjct: 94 PAAPVPNDVTLLTVLSACADSPSSPLARRLALSVHARVLKL-FPSHLLLSTCLVRFYFAS 152
Query: 123 GFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYT 182
+ +LFD MP R+ VT+N +I+GL++ G + A +F+ MP + VSWT +IDG
Sbjct: 153 RLPHLALQLFDAMPVRSAVTYNTVISGLMRNGLVAAAFEVFDGMPAPDKVSWTALIDGCV 212
Query: 183 RMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFD 242
+ R +EA+ FR M+ + EP +T++AV+ A + G + +H ++G +
Sbjct: 213 KNGRHDEAIDCFRAML-LDGVEPDYVTLIAVISACAEVGALGLGMWVHRLVVRQGLER-N 270
Query: 243 IRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRM 302
+R+ N LID YA+CG + A ++F + ++ +VSW S+I GFA +G +AVE+F M
Sbjct: 271 VRIANSLIDMYARCGQVELARQVFS--GMRKRTVVSWNSMIVGFAANGRCADAVEHFEAM 328
Query: 303 QKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGR 362
++ G KP+ VTF VL ACSHGGL +EGL ++D M E + ++HYGC++D+LGR+G+
Sbjct: 329 RREGFKPDAVTFTGVLTACSHGGLTDEGLRYYDLMRAEYGIAARMEHYGCVVDLLGRSGQ 388
Query: 363 LEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYN 422
LE+A + +P +VV+ LL C HG+V M E++ + +LE++ G +YVL+ N
Sbjct: 389 LEEAMRVVTTMPMRPNEVVLG-ALLAGCRMHGDVGMAEQLMQHLLELDPGGDANYVLLSN 447
Query: 423 ILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
I A VG++ A ++R +M R K PG S V
Sbjct: 448 IYAAVGKWDGAGKVRSLMKARGLRKRPGYSAV 479
>gi|449443225|ref|XP_004139380.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04750,
mitochondrial-like [Cucumis sativus]
Length = 651
Score = 261 bits (666), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 149/382 (39%), Positives = 218/382 (57%), Gaps = 6/382 (1%)
Query: 73 DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLF 132
D FT L+ C L LG +HA I K S++ + AL++MYV LK + K+F
Sbjct: 228 DDFTMLGLLLLCGQLGETKLGKSVHAQIEKSIGSSNLILYNALLDMYVKCNELKLARKVF 287
Query: 133 DEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALA 192
D E++ V+WN +I G K GELE A LF ++P R++VSW +I GY +
Sbjct: 288 DGPMEKDTVSWNTIIAGYAKVGELELACDLFNQIPTRDIVSWNSLISGYAQNGDYVTVKC 347
Query: 193 LFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDT 252
LF +M A E +P ++TI+ ++ A+ + G + + IHG K T + + LID
Sbjct: 348 LFTRMFA-ENVKPDKVTIVNLISAVAEMGALDQGRWIHGLAVKM-LTKIEAFSGSALIDM 405
Query: 253 YAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRV 312
Y KCG I A +F I K++ +WT++I+GFA HG G +A+E F MQ KPN V
Sbjct: 406 YCKCGSIERAFVIFNQIP--EKDVTTWTTMITGFAFHGFGNKALELFSVMQ-AETKPNDV 462
Query: 313 TFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALG 372
TF+SVL ACSH GLV+EGL F M + + P ++HYGCL+D+L R+GRL A
Sbjct: 463 TFVSVLAACSHSGLVDEGLKIFSSMKKRYSIEPGVEHYGCLVDLLCRSGRLLDAIGVIEK 522
Query: 373 IPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGD 432
+P E + +W +L AC H N+E+ ER ++L++E G Y+L+ N+ A GR+
Sbjct: 523 MPMEPSR-SIWGAVLSACRMHRNMELAERALMELLKLEPEKEGGYILLSNVYATCGRWSY 581
Query: 433 AERLRRVMDERNAFKVPGCSLV 454
++ +R VM+ R K+ GCS V
Sbjct: 582 SDSIREVMNSRGVKKIAGCSSV 603
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 102/370 (27%), Positives = 172/370 (46%), Gaps = 35/370 (9%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNL 92
+FNT++ + S +KAF +Y+ + Q T+ D T+ +L++T ++
Sbjct: 99 IFNTMILGFPF--SNEKAFTIYRSMLQNGTYP--------DRQTFLYLLQTTKFVAEVK- 147
Query: 93 GTQLHAVISKVGFQS-HVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLV 151
Q+H G S Y+ +L+ YV G + + +LFDEM +RN+V++N MI G
Sbjct: 148 --QIHCHALVFGLLSKEEYLRNSLIKRYVDNGCFECARQLFDEMSDRNVVSYNTMILGFA 205
Query: 152 KWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVA-CEYTEPSEITI 210
K G + LF +M + + G + L + + A E + S I
Sbjct: 206 KVGNILGILELFHDMRSHGLEPDDFTMLGLLLLCGQLGETKLGKSVHAQIEKSIGSSNLI 265
Query: 211 L--AVLPAIWQNGDVK-SCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFE 267
L A+L + ++K + ++ G EK D N +I YAK G + A LF
Sbjct: 266 LYNALLDMYVKCNELKLARKVFDGPMEK------DTVSWNTIIAGYAKVGELELACDLFN 319
Query: 268 DISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLV 327
I +++VSW S+ISG+A +G F RM +KP++VT +++++A + G +
Sbjct: 320 QIPT--RDIVSWNSLISGYAQNGDYVTVKCLFTRMFAENVKPDKVTIVNLISAVAEMGAL 377
Query: 328 EEGL---NFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWR 384
++G KM+ + E LIDM + G +E+A IP + DV W
Sbjct: 378 DQGRWIHGLAVKMLTKIEAFSG----SALIDMYCKCGSIERAFVIFNQIPEK--DVTTWT 431
Query: 385 TLLGACSFHG 394
T++ +FHG
Sbjct: 432 TMITGFAFHG 441
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 79/274 (28%), Positives = 125/274 (45%), Gaps = 22/274 (8%)
Query: 156 LEFARSLFEEM-PCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVL 214
LE A LF P N+ + +I G+ N +A ++R M+ T P T L +L
Sbjct: 81 LELAILLFNHFTPYPNLYIFNTMILGFPFSNE--KAFTIYRSMLQ-NGTYPDRQTFLYLL 137
Query: 215 PAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERK 274
+VK IH + G + + + N LI Y GC A +LF+++S +
Sbjct: 138 QTTKFVAEVKQ---IHCHALVFGLLSKEEYLRNSLIKRYVDNGCFECARQLFDEMS--DR 192
Query: 275 NLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFF 334
N+VS+ ++I GFA G +E F M+ GL+P+ T L +L C G + G +
Sbjct: 193 NVVSYNTMILGFAKVGNILGILELFHDMRSHGLEPDDFTMLGLLLLCGQLGETKLGKSVH 252
Query: 335 DKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHG 394
+ +E+ ++ Y L+DM + L+ A K G P E D V W T++ + G
Sbjct: 253 AQ-IEKSIGSSNLILYNALLDMYVKCNELKLARKVFDG-PME-KDTVSWNTIIAGYAKVG 309
Query: 395 NVEMG-----ERVTRKIL---EMERGYG--GDYV 418
+E+ + TR I+ + GY GDYV
Sbjct: 310 ELELACDLFNQIPTRDIVSWNSLISGYAQNGDYV 343
>gi|90657651|gb|ABD96949.1| hypothetical protein [Cleome spinosa]
Length = 639
Score = 261 bits (666), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 139/384 (36%), Positives = 222/384 (57%), Gaps = 7/384 (1%)
Query: 73 DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLF 132
D T + C+ L + +G ++H + + + AL++MY G + + +F
Sbjct: 215 DEATVVSTLSACSVLRNQEVGEEIHRYVD-AELEMTTKIGNALLDMYCKCGCVDKARAIF 273
Query: 133 DEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALA 192
DEM +N++ W M++G G L+ AR LFE P R++V WT +I+GY + N +EAL
Sbjct: 274 DEMGNKNVICWTSMVSGYASNGSLDEARELFERSPVRDIVLWTAMINGYVQFNLFDEALK 333
Query: 193 LFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDT 252
LFRKM + P ++ +L Q G ++ + +HGY + T D V L+D
Sbjct: 334 LFRKM-QIQRLRPDNFILVTLLKGCAQTGALEQGKWLHGYIHENSIT-LDRVVGTALVDV 391
Query: 253 YAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRV 312
YAKCGC+ A ++F ++ + ++ SWTS+I G A++GM +A++ F +M++ G +P+ +
Sbjct: 392 YAKCGCVEKALEVFYEM--KERDTASWTSVIYGLAVNGMTSKALDFFSQMEEAGFRPDDI 449
Query: 313 TFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALG 372
TF+ VL AC+HGGLVEEG +FD M + ++ P +HY CLID+L RAG L++AE
Sbjct: 450 TFIGVLTACNHGGLVEEGRRYFDSMTKTYKIQPKSEHYSCLIDLLCRAGLLDEAELLLEM 509
Query: 373 IPSEITDVVV--WRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRF 430
IP E +D+VV + +LL AC +GN++M ERV R++ +E + L+ ++ A R+
Sbjct: 510 IPIESSDIVVPLYCSLLSACRNYGNLKMSERVGRRLERVEVKDSSVHTLLASVYASANRW 569
Query: 431 GDAERLRRVMDERNAFKVPGCSLV 454
D +RR M E K PGCS +
Sbjct: 570 EDVTTVRRKMKELGIRKFPGCSSI 593
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 102/447 (22%), Positives = 189/447 (42%), Gaps = 95/447 (21%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNL 92
++N ++ + E+ +K +L+ +L++ L P D+FT + + L
Sbjct: 83 MYNLMIKAVAKDENFRKVLVLFSELRK------QGLNP--DNFTLPPVFKAMGCLGKVVE 134
Query: 93 GTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVK 152
G ++H + K GF + V +++ MY +LG
Sbjct: 135 GEKVHGYVVKSGFDA--CVCNSVMGMYGALG----------------------------- 163
Query: 153 WGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILA 212
++E A+ +F+E+P R+VVSW +I Y + +A+A+FR+M + E T+++
Sbjct: 164 --KMEVAKKVFDEIPERDVVSWNVLISSYVGHRKFEDAIAVFRRMRRESNLKADEATVVS 221
Query: 213 VLPA--IWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDIS 270
L A + +N +V + IH Y + ++ N L+D Y KCGC+ A +F+++
Sbjct: 222 TLSACSVLRNQEVG--EEIHRYVDAE--LEMTTKIGNALLDMYCKCGCVDKARAIFDEMG 277
Query: 271 VERKNLVSWTSIISGFAMHGMGKEAVENFGR----------------------------- 301
KN++ WTS++SG+A +G EA E F R
Sbjct: 278 --NKNVICWTSMVSGYASNGSLDEARELFERSPVRDIVLWTAMINGYVQFNLFDEALKLF 335
Query: 302 --MQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGR 359
MQ L+P+ +++L C+ G +E+G + + E + D L+D+ +
Sbjct: 336 RKMQIQRLRPDNFILVTLLKGCAQTGALEQG-KWLHGYIHENSITLDRVVGTALVDVYAK 394
Query: 360 AGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEM-----ERGYG 414
G +E+A + + D W +++ + +G +T K L+ E G+
Sbjct: 395 CGCVEKALEVFYEMKER--DTASWTSVIYGLAVNG-------MTSKALDFFSQMEEAGFR 445
Query: 415 GDYVLMYNILAGVGRFGDAERLRRVMD 441
D + +L G E RR D
Sbjct: 446 PDDITFIGVLTACNHGGLVEEGRRYFD 472
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 87/354 (24%), Positives = 156/354 (44%), Gaps = 53/354 (14%)
Query: 80 LIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERN 139
L+++C +++H TQ+HA I +VG Q ++ T +V LF P R
Sbjct: 22 LLQSCESMAHL---TQIHAKIFRVGLQDNMDTLTKIV--------------LFCTDPSRG 64
Query: 140 LVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVA 199
+ + + G V + PC +V + +I + + L LF ++
Sbjct: 65 SIRYAERVLGFV-------------QSPC--LVMYNLMIKAVAKDENFRKVLVLFSELRK 109
Query: 200 CEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCI 259
+ P T+ V A+ G V + +HGY K GF A V N ++ Y G +
Sbjct: 110 -QGLNPDNFTLPPVFKAMGCLGKVVEGEKVHGYVVKSGFDAC---VCNSVMGMYGALGKM 165
Query: 260 FSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQK-VGLKPNRVTFLSVL 318
A K+F++I +++VSW +IS + H ++A+ F RM++ LK + T +S L
Sbjct: 166 EVAKKVFDEIP--ERDVVSWNVLISSYVGHRKFEDAIAVFRRMRRESNLKADEATVVSTL 223
Query: 319 NACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEI- 377
+ACS E G + E E+ I + L+DM + G +++A I E+
Sbjct: 224 SACSVLRNQEVGEEIHRYVDAELEMTTKIGN--ALLDMYCKCGCVDKAR----AIFDEMG 277
Query: 378 -TDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRF 430
+V+ W +++ + +G+++ + ER D VL ++ G +F
Sbjct: 278 NKNVICWTSMVSGYASNGSLDEAREL------FERSPVRDIVLWTAMINGYVQF 325
>gi|45935146|gb|AAS79604.1| putative pentatricopeptide repeat-containing protein [Ipomoea
trifida]
gi|118562903|dbj|BAF37793.1| hypothetical protein [Ipomoea trifida]
Length = 575
Score = 261 bits (666), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 156/456 (34%), Positives = 243/456 (53%), Gaps = 62/456 (13%)
Query: 2 HILQNSQTPNNITTQIHSHLLTTNSLLHHSQLFNTLLHFYSLAESPQKAFLLYKQLQQIY 61
HIL+ TPN+ +NT++ YS + P +AF L+ +Q
Sbjct: 50 HILRTLHTPNSF-------------------YYNTMIRAYSDSTDPTRAFTLFLYMQN-- 88
Query: 62 THSHSPLPPLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMY-V 120
S P D FTY F+++ C+ H G Q+H ++ K G S Y+N AL+++Y V
Sbjct: 89 PDDASVAVPRPDHFTYPFVLKACSKSGHARFGKQIHGLVFKSGVGSDRYINNALIHLYSV 148
Query: 121 SLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDG 180
S GE A +F++MP R+VVSWT IIDG
Sbjct: 149 S--------------------------------GEPNLAYKVFDKMPDRDVVSWTSIIDG 176
Query: 181 YTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTA 240
+ +R EA+ LF M+ EP+E+T+ +VL A G + + + IH + +++ F++
Sbjct: 177 FVDNDRPIEAIRLFTHMIE-NGIEPNEVTVASVLRACADTGALNTGERIHSFVKEKNFSS 235
Query: 241 FDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFG 300
+ V LID YAKCGCI A ++F++ K++ WT+II+G A HG+ +A+E F
Sbjct: 236 -NANVSTALIDMYAKCGCIDGALEVFDE--TLEKDVYVWTAIIAGLASHGLCMKAIEFFE 292
Query: 301 RMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRA 360
M+K +K + +VL+A + GLV EGL FF ++ ++ ++ P I+HYGC++DML RA
Sbjct: 293 NMKKSDVKMDERAITAVLSAYRNAGLVSEGLLFFRRL-KKHKIKPTIQHYGCVVDMLTRA 351
Query: 361 GRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTR--KILEMERGYGGDYV 418
GRL+ AE+ +P E D V+WRTL+ C G+VE ER+ R ++L M+ G YV
Sbjct: 352 GRLKDAEEFIRKMPIE-PDAVLWRTLIWGCKILGDVERSERLVRELELLNMDSRDTGSYV 410
Query: 419 LMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
L+ N+ A G++ + + R +M +R K P CS +
Sbjct: 411 LLENVYAATGKWEEKAKTRELMYQRGLMKPPACSRI 446
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 89/336 (26%), Positives = 133/336 (39%), Gaps = 51/336 (15%)
Query: 148 TGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKM-----VACEY 202
+ L G+L +AR + + N + +I Y+ A LF M +
Sbjct: 37 SALSPSGDLNYARHILRTLHTPNSFYYNTMIRAYSDSTDPTRAFTLFLYMQNPDDASVAV 96
Query: 203 TEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSA 262
P T VL A ++G + + IHG K G + D + N LI Y+ G A
Sbjct: 97 PRPDHFTYPFVLKACSKSGHARFGKQIHGLVFKSGVGS-DRYINNALIHLYSVSGEPNLA 155
Query: 263 SKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACS 322
K+F+ + +++VSWTSII GF + EA+ F M + G++PN VT SVL AC+
Sbjct: 156 YKVFDKMP--DRDVVSWTSIIDGFVDNDRPIEAIRLFTHMIENGIEPNEVTVASVLRACA 213
Query: 323 HGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEI--TDV 380
G + G V+E + LIDM + G ++ AL + E DV
Sbjct: 214 DTGALNTGERIH-SFVKEKNFSSNANVSTALIDMYAKCGCID----GALEVFDETLEKDV 268
Query: 381 VVWRTLLGACSFHG---------------NVEMGERVTRKILEMERGYG----------- 414
VW ++ + HG +V+M ER +L R G
Sbjct: 269 YVWTAIIAGLASHGLCMKAIEFFENMKKSDVKMDERAITAVLSAYRNAGLVSEGLLFFRR 328
Query: 415 ----------GDYVLMYNILAGVGRFGDAERLRRVM 440
Y + ++L GR DAE R M
Sbjct: 329 LKKHKIKPTIQHYGCVVDMLTRAGRLKDAEEFIRKM 364
>gi|296081956|emb|CBI20961.3| unnamed protein product [Vitis vinifera]
Length = 553
Score = 260 bits (665), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 146/422 (34%), Positives = 236/422 (55%), Gaps = 41/422 (9%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNL 92
L+N ++ Y + A +YKQ+ H +P+ P D FT+ F++++CA L +L
Sbjct: 124 LYNAMIRAYKHNKVYVLAITVYKQMLG-NPHGENPIFP--DKFTFPFVVKSCAGLMCYDL 180
Query: 93 GTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVK 152
G Q+H + K G +S+ V +LV MYV L D
Sbjct: 181 GKQVHGHVFKFGQKSNTVVENSLVEMYVKCDSLDD------------------------- 215
Query: 153 WGELEFARSLFEEMPCRN--VVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITI 210
A +FEEM R+ + SWT I+ GY R+ +AL FR+M EP EI++
Sbjct: 216 ------AHRVFEEMTERDATIFSWTAIVSGYARIGCYADALEFFRRMQMVG-IEPDEISL 268
Query: 211 LAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDIS 270
++VLP Q G ++ + IH Y +K GF +I V N LI+ YAKCG I +LF+ +
Sbjct: 269 VSVLPDCAQLGALELGKWIHIYADKAGFLR-NICVCNALIEMYAKCGSIDQGRRLFDQM- 326
Query: 271 VERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEG 330
+ ++++SW+++I G A HG +EA+E F MQK ++P+ +TF+ +L AC+H GL+ EG
Sbjct: 327 -KERDVISWSTMIVGLANHGRAREAIELFQEMQKAKIEPSIITFVGLLTACAHAGLLNEG 385
Query: 331 LNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGAC 390
L +F+ M + + P ++HYGCL+++LG +GRL+QA + +P + D +W +LL +C
Sbjct: 386 LRYFESMKRDYNIEPGVEHYGCLVNLLGLSGRLDQALELVKKMPRK-PDSPIWGSLLSSC 444
Query: 391 SFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPG 450
HGN+++ +LE+E G+YVL+ N+ A +G++ R+R++M ++ K PG
Sbjct: 445 RSHGNLKIAVIAMEHLLELEPADTGNYVLLSNLYADLGKWDGVSRMRKLMRSKSMKKTPG 504
Query: 451 CS 452
CS
Sbjct: 505 CS 506
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 123/251 (49%), Gaps = 18/251 (7%)
Query: 153 WGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILA 212
+GE E+A LF+ + N + +I Y A+ ++++M+ + E
Sbjct: 104 YGETEYANLLFKGVADPNAFLYNAMIRAYKHNKVYVLAITVYKQMLGNPHGENPIFPDKF 163
Query: 213 VLPAIWQNGDVKSC---------QLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSAS 263
P + VKSC + +HG+ K G + + V N L++ Y KC + A
Sbjct: 164 TFPFV-----VKSCAGLMCYDLGKQVHGHVFKFGQKSNTV-VENSLVEMYVKCDSLDDAH 217
Query: 264 KLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSH 323
++FE+++ + SWT+I+SG+A G +A+E F RMQ VG++P+ ++ +SVL C+
Sbjct: 218 RVFEEMTERDATIFSWTAIVSGYARIGCYADALEFFRRMQMVGIEPDEISLVSVLPDCAQ 277
Query: 324 GGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVW 383
G +E G + ++ L +I LI+M + G ++Q + L + DV+ W
Sbjct: 278 LGALELG-KWIHIYADKAGFLRNICVCNALIEMYAKCGSIDQGRR--LFDQMKERDVISW 334
Query: 384 RTLLGACSFHG 394
T++ + HG
Sbjct: 335 STMIVGLANHG 345
>gi|414864742|tpg|DAA43299.1| TPA: hypothetical protein ZEAMMB73_867482 [Zea mays]
Length = 501
Score = 260 bits (665), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 136/359 (37%), Positives = 219/359 (61%), Gaps = 14/359 (3%)
Query: 105 FQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFE 164
+ ++V +LV+MY + ++++FDE+P NLV+WN ++ G K +L AR +F
Sbjct: 93 LPADLHVANSLVHMYAACALPDHANRVFDEIPRPNLVSWNALLDGYAKCHDLPAARKVFA 152
Query: 165 EMPCRNVVSWTGIIDGYTRMNRSNEALALFRKM--VACEYTE---------PSEITILAV 213
MP R+VVSW+ +IDG + EALALF M A E +++T+++V
Sbjct: 153 RMPQRDVVSWSAMIDGCVKCGEHREALALFEMMENAAARSAEEEDGGGGARANDVTMVSV 212
Query: 214 LPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVER 273
L A Q GD++ + H +RGF A ++R+ L+D YAKCG I A ++F + VE
Sbjct: 213 LGACAQLGDLERGRRAHRCLRERGF-ALNLRLATSLVDMYAKCGAISEAMEVFWAVPVES 271
Query: 274 KNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNF 333
+++ W ++I G A+HGM ++VE F MQ+ G+ P+ +T+L +L+AC+HGGLV+E F
Sbjct: 272 TDVLIWNAVIGGLAVHGMATKSVEIFLEMQRAGVAPDEITYLCLLSACAHGGLVDEAWEF 331
Query: 334 FDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFH 393
F + +E + P ++HY CL+D+LGRAGRLE+ +P + + V V LL AC H
Sbjct: 332 F-RSLEAQGLRPHVEHYACLVDVLGRAGRLEEVYGVVKSMPMKPS-VSVLGALLNACHLH 389
Query: 394 GNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCS 452
G VE+GE + R++++++ + G Y+ + NI A R+ +A++ R+VM++R KVPG S
Sbjct: 390 GWVELGEVLGRRLVQLQPDHDGRYIGLSNIYAVARRWQEAKKARKVMEDRGVKKVPGFS 448
>gi|124360491|gb|ABN08501.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 575
Score = 260 bits (665), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 145/430 (33%), Positives = 247/430 (57%), Gaps = 33/430 (7%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+N +L Y+ +P++ L+ + SP D T++ +I +C++L P L
Sbjct: 162 WNAMLSGYAQGGAPEETIRLFNDML-------SPGNVQPDETTWATVISSCSSLGDPCLS 214
Query: 94 TQL-HAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEM---PERNLVTWNVMITG 149
+ + KVGF+ + +V TAL++M+ G L+ + K+F+++ R+ V WN MI+
Sbjct: 215 ESIVRKLDDKVGFRPNYFVKTALLDMHAKCGNLEAAHKIFEQLGVYKYRSSVPWNAMISA 274
Query: 150 LVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYT-EPSEI 208
+ G+L A+ LF++MP R+ VSW +I GYT+ S +A+ LF +M++ E + +P E+
Sbjct: 275 YARVGDLPSAKHLFDKMPQRDTVSWNSMIAGYTQNGESFKAIKLFEEMISSEDSRKPDEV 334
Query: 209 TILAVLPAIWQNGDVKSCQLIHGYGE------KRGFTAFDIRVLNCLIDTYAKCGCIFSA 262
T+++V A G++ G G K I V N LI+ Y++CG + A
Sbjct: 335 TMVSVFSACGHLGEL-------GLGNWAVSILKVNHIQISISVYNSLINMYSRCGSMQDA 387
Query: 263 SKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACS 322
+F++++ ++LVS+ ++ISGFA HG G E++E +M++ G++P+R+T++++L ACS
Sbjct: 388 VLIFQEMAT--RDLVSYNTLISGFAEHGHGMESIELLSKMKEDGIEPDRITYIAILTACS 445
Query: 323 HGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVV 382
H GL++EG F+ + PD+ HY C+IDMLGRAGRLE+A K +P E +
Sbjct: 446 HAGLLDEGQRLFESI-----KFPDVDHYACMIDMLGRAGRLEEAMKLIQSMPME-PHAGI 499
Query: 383 WRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDE 442
+ +LL A S H VE+GE K+ ++E G+Y L+ NI A GR+ + +++R M +
Sbjct: 500 YGSLLNATSIHKQVELGELAAAKLFKVEPHNSGNYALLSNIYASAGRWKEGDKVRDTMRK 559
Query: 443 RNAFKVPGCS 452
+ K G S
Sbjct: 560 QGVKKTTGLS 569
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 123/478 (25%), Positives = 211/478 (44%), Gaps = 100/478 (20%)
Query: 37 LLHFYSLAESPQKAFL-LYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLGTQ 95
+L +YS + F+ L+K + Q H + P ++ YS ++++ + S L
Sbjct: 1 MLKYYSQIGVHSQVFVSLFKHMLQ-----HCDIKP--NASFYSVMMKSAGSESMLFL--- 50
Query: 96 LHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPER----------------- 138
A + K G+ YV ++ +Y G ++ + KLFDEMP+R
Sbjct: 51 --AHVLKSGYDRDHYVRNGILGIYAKYGPIEFARKLFDEMPDRTVADWNVMISGYWKCGN 108
Query: 139 ------------------NLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDG 180
N++TW MITG K G L+ AR F++MP R+VVSW ++ G
Sbjct: 109 EEEASTLFHVMGDQEISRNVITWTTMITGHAKKGNLKTARMYFDKMPERSVVSWNAMLSG 168
Query: 181 YTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGD-VKSCQLIHGYGEKRGFT 239
Y + E + LF M++ +P E T V+ + GD S ++ +K GF
Sbjct: 169 YAQGGAPEETIRLFNDMLSPGNVQPDETTWATVISSCSSLGDPCLSESIVRKLDDKVGFR 228
Query: 240 AFDIRVLNCLIDTYAKCGCIFSASKLFEDISVER-------------------------- 273
+ V L+D +AKCG + +A K+FE + V +
Sbjct: 229 P-NYFVKTALLDMHAKCGNLEAAHKIFEQLGVYKYRSSVPWNAMISAYARVGDLPSAKHL 287
Query: 274 ------KNLVSWTSIISGFAMHGMGKEAVENFGRM--QKVGLKPNRVTFLSVLNACSHGG 325
++ VSW S+I+G+ +G +A++ F M + KP+ VT +SV +AC H G
Sbjct: 288 FDKMPQRDTVSWNSMIAGYTQNGESFKAIKLFEEMISSEDSRKPDEVTMVSVFSACGHLG 347
Query: 326 LVEEGL-NFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEIT--DVVV 382
E GL N+ +++ + I Y LI+M R G ++ A+ I E+ D+V
Sbjct: 348 --ELGLGNWAVSILKVNHIQISISVYNSLINMYSRCGSMQD----AVLIFQEMATRDLVS 401
Query: 383 WRTLLGACSFHG----NVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERL 436
+ TL+ + HG ++E+ ++ +E +R Y+ + + G + +RL
Sbjct: 402 YNTLISGFAEHGHGMESIELLSKMKEDGIEPDR---ITYIAILTACSHAGLLDEGQRL 456
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 96/209 (45%), Gaps = 11/209 (5%)
Query: 242 DIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGR 301
D V N ++ YAK G I A KLF+++ + + W +ISG+ G +EA F
Sbjct: 61 DHYVRNGILGIYAKYGPIEFARKLFDEMP--DRTVADWNVMISGYWKCGNEEEASTLFHV 118
Query: 302 MQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAG 361
M + N +T+ +++ + G ++ +FDKM E V + ++ + G
Sbjct: 119 MGDQEISRNVITWTTMITGHAKKGNLKTARMYFDKMPERSVV-----SWNAMLSGYAQGG 173
Query: 362 RLEQAEK--TALGIPSEIT-DVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYV 418
E+ + + P + D W T++ +CS G+ + E + RK L+ + G+ +Y
Sbjct: 174 APEETIRLFNDMLSPGNVQPDETTWATVISSCSSLGDPCLSESIVRK-LDDKVGFRPNYF 232
Query: 419 LMYNILAGVGRFGDAERLRRVMDERNAFK 447
+ +L + G+ E ++ ++ +K
Sbjct: 233 VKTALLDMHAKCGNLEAAHKIFEQLGVYK 261
Score = 39.7 bits (91), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 84/213 (39%), Gaps = 30/213 (14%)
Query: 21 LLTTNSLLHHSQLFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFL 80
+L N + ++N+L++ YS S Q A L+++++ D +Y+ L
Sbjct: 358 ILKVNHIQISISVYNSLINMYSRCGSMQDAVLIFQEMAT------------RDLVSYNTL 405
Query: 81 IRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNL 140
I A H +L + + + G + A++ G L + +LF+ + ++
Sbjct: 406 ISGFAEHGHGMESIELLSKMKEDGIEPDRITYIAILTACSHAGLLDEGQRLFESIKFPDV 465
Query: 141 VTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNE-----ALALFR 195
+ MI L + G LE A L + MP G + T +++ E A LF+
Sbjct: 466 DHYACMIDMLGRAGRLEEAMKLIQSMPMEPHAGIYGSLLNATSIHKQVELGELAAAKLFK 525
Query: 196 KMVACEYTEPSEITILAVLPAI------WQNGD 222
EP A+L I W+ GD
Sbjct: 526 -------VEPHNSGNYALLSNIYASAGRWKEGD 551
>gi|357468161|ref|XP_003604365.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355505420|gb|AES86562.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 874
Score = 260 bits (665), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 135/383 (35%), Positives = 225/383 (58%), Gaps = 6/383 (1%)
Query: 73 DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGF-QSHVYVNTALVNMYVSLGFLKDSSKL 131
+S T ++ C+ L G ++ K G + ++ + AL++M+ S G + + +
Sbjct: 238 NSVTLVLMLSACSKLKDLVGGKCIYNKYIKEGIVEPNLILENALIDMFASCGEMDAARGV 297
Query: 132 FDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEAL 191
FDEM R++++W ++TG ++ AR F++MP R+ VSWT +IDGY RMNR E L
Sbjct: 298 FDEMKTRDVISWTSIVTGFANTCRIDLARKYFDQMPERDYVSWTAMIDGYLRMNRFKEVL 357
Query: 192 ALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLID 251
LFR M +P E T++++L A G ++ + Y +K D + N LID
Sbjct: 358 TLFRDMQMSN-VKPDEFTMVSILTACAHLGALELGEWAKTYIDKNKIKN-DTFIGNALID 415
Query: 252 TYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNR 311
Y KCG + A K+F ++ ++K+ +WT++I G A +G G+EA+ F M + + P+
Sbjct: 416 MYFKCGNVEKAKKIFNEM--QKKDKFTWTAMIVGLANNGHGEEALTMFSYMLEASVTPDE 473
Query: 312 VTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTAL 371
+T++ V+ AC+H GLV +G +FF M + + P++ HYGC++D+LGRAG L++A + +
Sbjct: 474 ITYIGVMCACTHVGLVAKGKHFFSNMAVQHGIKPNLTHYGCMVDLLGRAGHLKEALEVIM 533
Query: 372 GIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFG 431
+P + + +VW +LLGAC H NV++ E +ILE+E G YVL+ NI A ++
Sbjct: 534 NMPVK-PNSIVWGSLLGACRVHKNVQLAEMAANEILELEPENGAVYVLLCNIYAACKKWK 592
Query: 432 DAERLRRVMDERNAFKVPGCSLV 454
+ +R++M ER K+PGCSL+
Sbjct: 593 NLHNVRKMMMERGIKKIPGCSLM 615
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 92/368 (25%), Positives = 161/368 (43%), Gaps = 73/368 (19%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNL 92
++NT++ YS + LYK + H+ P D FT+ FL++
Sbjct: 102 IWNTMIKGYSRINCSESGVSLYKLM---LVHNIKP-----DGFTFPFLLKGFTKDMALKY 153
Query: 93 GTQL--HAVISKVGF-QSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITG 149
G L HAVI GF S+++V ++++ G + + K+FD +VTWNV+++G
Sbjct: 154 GKVLLNHAVIH--GFLDSNLFVQKGFIHLFSLCGLVNYARKIFDMGDGWEVVTWNVVLSG 211
Query: 150 LVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEIT 209
++ E ++ LF EM + CE P+ +T
Sbjct: 212 YNRFKRYEESKRLFIEMEKK------------------------------CECVSPNSVT 241
Query: 210 ILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFED- 268
++ +L A + D+ + I+ K G ++ + N LID +A CG + +A +F++
Sbjct: 242 LVLMLSACSKLKDLVGGKCIYNKYIKEGIVEPNLILENALIDMFASCGEMDAARGVFDEM 301
Query: 269 --------------------ISVERK--------NLVSWTSIISGFAMHGMGKEAVENFG 300
I + RK + VSWT++I G+ KE + F
Sbjct: 302 KTRDVISWTSIVTGFANTCRIDLARKYFDQMPERDYVSWTAMIDGYLRMNRFKEVLTLFR 361
Query: 301 RMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRA 360
MQ +KP+ T +S+L AC+H G +E G + +++ ++ D LIDM +
Sbjct: 362 DMQMSNVKPDEFTMVSILTACAHLGALELG-EWAKTYIDKNKIKNDTFIGNALIDMYFKC 420
Query: 361 GRLEQAEK 368
G +E+A+K
Sbjct: 421 GNVEKAKK 428
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 72/299 (24%), Positives = 142/299 (47%), Gaps = 20/299 (6%)
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
G++ +AR +F+E+P +V W +I GY+R+N S ++L++ M+ +P T +
Sbjct: 83 GDVYYARKVFDEIPQPSVFIWNTMIKGYSRINCSESGVSLYKLMLV-HNIKPDGFTFPFL 141
Query: 214 LPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVER 273
L ++ +K +++ + GF ++ V I ++ CG + A K+F+ +
Sbjct: 142 LKGFTKDMALKYGKVLLNHAVIHGFLDSNLFVQKGFIHLFSLCGLVNYARKIFD--MGDG 199
Query: 274 KNLVSWTSIISGFAMHGMGKEAVENFGRMQKV--GLKPNRVTFLSVLNACSHGGLVEEGL 331
+V+W ++SG+ +E+ F M+K + PN VT + +L+ACS + G
Sbjct: 200 WEVVTWNVVLSGYNRFKRYEESKRLFIEMEKKCECVSPNSVTLVLMLSACSKLKDLVGGK 259
Query: 332 NFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEIT--DVVVWRTLLGA 389
++K ++E V P++ LIDM G ++ A G+ E+ DV+ W +++
Sbjct: 260 CIYNKYIKEGIVEPNLILENALIDMFASCGEMDAAR----GVFDEMKTRDVISWTSIVTG 315
Query: 390 CSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAG---VGRFGDAERLRRVMDERNA 445
+ +++ + ++ E DYV ++ G + RF + L R M N
Sbjct: 316 FANTCRIDLARKYFDQMPER------DYVSWTAMIDGYLRMNRFKEVLTLFRDMQMSNV 368
>gi|357507465|ref|XP_003624021.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355499036|gb|AES80239.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 632
Score = 260 bits (665), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 145/430 (33%), Positives = 247/430 (57%), Gaps = 33/430 (7%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+N +L Y+ +P++ L+ + SP D T++ +I +C++L P L
Sbjct: 219 WNAMLSGYAQGGAPEETIRLFNDML-------SPGNVQPDETTWATVISSCSSLGDPCLS 271
Query: 94 TQL-HAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEM---PERNLVTWNVMITG 149
+ + KVGF+ + +V TAL++M+ G L+ + K+F+++ R+ V WN MI+
Sbjct: 272 ESIVRKLDDKVGFRPNYFVKTALLDMHAKCGNLEAAHKIFEQLGVYKYRSSVPWNAMISA 331
Query: 150 LVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYT-EPSEI 208
+ G+L A+ LF++MP R+ VSW +I GYT+ S +A+ LF +M++ E + +P E+
Sbjct: 332 YARVGDLPSAKHLFDKMPQRDTVSWNSMIAGYTQNGESFKAIKLFEEMISSEDSRKPDEV 391
Query: 209 TILAVLPAIWQNGDVKSCQLIHGYGE------KRGFTAFDIRVLNCLIDTYAKCGCIFSA 262
T+++V A G++ G G K I V N LI+ Y++CG + A
Sbjct: 392 TMVSVFSACGHLGEL-------GLGNWAVSILKVNHIQISISVYNSLINMYSRCGSMQDA 444
Query: 263 SKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACS 322
+F++++ ++LVS+ ++ISGFA HG G E++E +M++ G++P+R+T++++L ACS
Sbjct: 445 VLIFQEMAT--RDLVSYNTLISGFAEHGHGMESIELLSKMKEDGIEPDRITYIAILTACS 502
Query: 323 HGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVV 382
H GL++EG F+ + PD+ HY C+IDMLGRAGRLE+A K +P E +
Sbjct: 503 HAGLLDEGQRLFESI-----KFPDVDHYACMIDMLGRAGRLEEAMKLIQSMPME-PHAGI 556
Query: 383 WRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDE 442
+ +LL A S H VE+GE K+ ++E G+Y L+ NI A GR+ + +++R M +
Sbjct: 557 YGSLLNATSIHKQVELGELAAAKLFKVEPHNSGNYALLSNIYASAGRWKEGDKVRDTMRK 616
Query: 443 RNAFKVPGCS 452
+ K G S
Sbjct: 617 QGVKKTTGLS 626
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 124/483 (25%), Positives = 214/483 (44%), Gaps = 100/483 (20%)
Query: 32 QLFNTLLHFYSLAESPQKAFL-LYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHP 90
++F +L +YS + F+ L+K + Q H + P ++ YS ++++ + S
Sbjct: 53 RVFTFMLKYYSQIGVHSQVFVSLFKHMLQ-----HCDIKP--NASFYSVMMKSAGSESML 105
Query: 91 NLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPER------------ 138
L A + K G+ YV ++ +Y G ++ + KLFDEMP+R
Sbjct: 106 FL-----AHVLKSGYDRDHYVRNGILGIYAKYGPIEFARKLFDEMPDRTVADWNVMISGY 160
Query: 139 -----------------------NLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWT 175
N++TW MITG K G L+ AR F++MP R+VVSW
Sbjct: 161 WKCGNEEEASTLFHVMGDQEISRNVITWTTMITGHAKKGNLKTARMYFDKMPERSVVSWN 220
Query: 176 GIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGD-VKSCQLIHGYGE 234
++ GY + E + LF M++ +P E T V+ + GD S ++ +
Sbjct: 221 AMLSGYAQGGAPEETIRLFNDMLSPGNVQPDETTWATVISSCSSLGDPCLSESIVRKLDD 280
Query: 235 KRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVER--------------------- 273
K GF + V L+D +AKCG + +A K+FE + V +
Sbjct: 281 KVGFRP-NYFVKTALLDMHAKCGNLEAAHKIFEQLGVYKYRSSVPWNAMISAYARVGDLP 339
Query: 274 -----------KNLVSWTSIISGFAMHGMGKEAVENFGRM--QKVGLKPNRVTFLSVLNA 320
++ VSW S+I+G+ +G +A++ F M + KP+ VT +SV +A
Sbjct: 340 SAKHLFDKMPQRDTVSWNSMIAGYTQNGESFKAIKLFEEMISSEDSRKPDEVTMVSVFSA 399
Query: 321 CSHGGLVEEGL-NFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEIT- 378
C H G E GL N+ +++ + I Y LI+M R G ++ A+ I E+
Sbjct: 400 CGHLG--ELGLGNWAVSILKVNHIQISISVYNSLINMYSRCGSMQD----AVLIFQEMAT 453
Query: 379 -DVVVWRTLLGACSFHG----NVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDA 433
D+V + TL+ + HG ++E+ ++ +E +R Y+ + + G +
Sbjct: 454 RDLVSYNTLISGFAEHGHGMESIELLSKMKEDGIEPDR---ITYIAILTACSHAGLLDEG 510
Query: 434 ERL 436
+RL
Sbjct: 511 QRL 513
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 96/209 (45%), Gaps = 11/209 (5%)
Query: 242 DIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGR 301
D V N ++ YAK G I A KLF+++ + + W +ISG+ G +EA F
Sbjct: 118 DHYVRNGILGIYAKYGPIEFARKLFDEMP--DRTVADWNVMISGYWKCGNEEEASTLFHV 175
Query: 302 MQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAG 361
M + N +T+ +++ + G ++ +FDKM E V + ++ + G
Sbjct: 176 MGDQEISRNVITWTTMITGHAKKGNLKTARMYFDKMPERSVV-----SWNAMLSGYAQGG 230
Query: 362 RLEQAEK--TALGIPSEIT-DVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYV 418
E+ + + P + D W T++ +CS G+ + E + RK L+ + G+ +Y
Sbjct: 231 APEETIRLFNDMLSPGNVQPDETTWATVISSCSSLGDPCLSESIVRK-LDDKVGFRPNYF 289
Query: 419 LMYNILAGVGRFGDAERLRRVMDERNAFK 447
+ +L + G+ E ++ ++ +K
Sbjct: 290 VKTALLDMHAKCGNLEAAHKIFEQLGVYK 318
Score = 39.3 bits (90), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 84/213 (39%), Gaps = 30/213 (14%)
Query: 21 LLTTNSLLHHSQLFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFL 80
+L N + ++N+L++ YS S Q A L+++++ D +Y+ L
Sbjct: 415 ILKVNHIQISISVYNSLINMYSRCGSMQDAVLIFQEMAT------------RDLVSYNTL 462
Query: 81 IRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNL 140
I A H +L + + + G + A++ G L + +LF+ + ++
Sbjct: 463 ISGFAEHGHGMESIELLSKMKEDGIEPDRITYIAILTACSHAGLLDEGQRLFESIKFPDV 522
Query: 141 VTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNE-----ALALFR 195
+ MI L + G LE A L + MP G + T +++ E A LF+
Sbjct: 523 DHYACMIDMLGRAGRLEEAMKLIQSMPMEPHAGIYGSLLNATSIHKQVELGELAAAKLFK 582
Query: 196 KMVACEYTEPSEITILAVLPAI------WQNGD 222
EP A+L I W+ GD
Sbjct: 583 -------VEPHNSGNYALLSNIYASAGRWKEGD 608
>gi|255584337|ref|XP_002532904.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527338|gb|EEF29484.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 604
Score = 260 bits (664), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 126/340 (37%), Positives = 212/340 (62%), Gaps = 5/340 (1%)
Query: 115 LVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSW 174
+++ YV G + + LF++MPERN+V+W+ M++G K G++E AR LF++MP +N+V+W
Sbjct: 226 ILDGYVKAGEMSQAFNLFEKMPERNVVSWSTMVSGYCKTGDMEMARMLFDKMPFKNLVTW 285
Query: 175 TGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGE 234
T II G+ + EA L+ +M A +P + T++++L A ++G + + +H +
Sbjct: 286 TIIISGFAEKGLAKEATTLYNQMEAAGL-KPDDGTLISILAACAESGLLVLGKKVHASIK 344
Query: 235 KRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKE 294
K + V N L+D YAKCG + A +F ++S+ ++LVSW ++ G AMHG G++
Sbjct: 345 KIRIKC-SVNVSNALVDMYAKCGRVDKALSIFNEMSM--RDLVSWNCMLQGLAMHGHGEK 401
Query: 295 AVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLI 354
A++ F +MQ+ G KP++VT +++L AC+H G V++GL++F+ M + ++P I+HYGC+I
Sbjct: 402 AIQLFSKMQQEGFKPDKVTLIAILCACTHAGFVDQGLSYFNSMERDHGIVPHIEHYGCMI 461
Query: 355 DMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYG 414
D+LGR GRLE+A + +P E D V+W TLLGAC H V + E+V +++ +E+
Sbjct: 462 DLLGRGGRLEEAFRLVQSMPMEPND-VIWGTLLGACRVHNAVPLAEKVLDRLITLEQSDP 520
Query: 415 GDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
G+Y ++ NI A G + +R M K G S +
Sbjct: 521 GNYSMLSNIFAAAGDWNSVANMRLQMKSTGVQKPSGASSI 560
Score = 39.7 bits (91), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 81/206 (39%), Gaps = 12/206 (5%)
Query: 242 DIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGR 301
D+ V LI ++ C + A +F I + N+ + ++I + +A F
Sbjct: 54 DLYVAPKLISAFSLCHQMNLAVNVFNQI--QDPNVHLYNTLIRAHVQNSQSLKAFATFFD 111
Query: 302 MQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAG 361
MQK GL + T+ +L AC+ G + + VE+ D+ LID + G
Sbjct: 112 MQKNGLFADNFTYPFLLKACNGKGWLPT-VQMIHCHVEKYGFFGDLFVPNSLIDSYSKCG 170
Query: 362 RLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMY 421
L L + D+V W +++G G++ ++ ++ E D V
Sbjct: 171 LLGVNYAMKLFMEMGEKDLVSWNSMIGGLVKAGDLGRARKLFDEMAER------DAVSWN 224
Query: 422 NILAG---VGRFGDAERLRRVMDERN 444
IL G G A L M ERN
Sbjct: 225 TILDGYVKAGEMSQAFNLFEKMPERN 250
>gi|9294596|dbj|BAB02877.1| unnamed protein product [Arabidopsis thaliana]
Length = 695
Score = 260 bits (664), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 134/381 (35%), Positives = 224/381 (58%), Gaps = 5/381 (1%)
Query: 74 SFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFD 133
S T ++ C+ + +L ++H +S+ + + + ALVN Y + G + + ++F
Sbjct: 236 SVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFR 295
Query: 134 EMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALAL 193
M R++++W ++ G V+ G L+ AR+ F++MP R+ +SWT +IDGY R NE+L +
Sbjct: 296 SMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEI 355
Query: 194 FRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTY 253
FR+M + P E T+++VL A G ++ + I Y +K D+ V N LID Y
Sbjct: 356 FREMQSAGMI-PDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKN-DVVVGNALIDMY 413
Query: 254 AKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVT 313
KCGC A K+F D+ ++++ +WT+++ G A +G G+EA++ F +MQ + ++P+ +T
Sbjct: 414 FKCGCSEKAQKVFHDM--DQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDIT 471
Query: 314 FLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGI 373
+L VL+AC+H G+V++ FF KM + + P + HYGC++DMLGRAG +++A + +
Sbjct: 472 YLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEAYEILRKM 531
Query: 374 PSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDA 433
P + +VW LLGA H + M E +KILE+E G Y L+ NI AG R+ D
Sbjct: 532 PMN-PNSIVWGALLGASRLHNDEPMAELAAKKILELEPDNGAVYALLCNIYAGCKRWKDL 590
Query: 434 ERLRRVMDERNAFKVPGCSLV 454
+RR + + K PG SL+
Sbjct: 591 REVRRKIVDVAIKKTPGFSLI 611
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 103/400 (25%), Positives = 172/400 (43%), Gaps = 76/400 (19%)
Query: 73 DSFTYSFLI----RTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDS 128
DS T+ FL+ R L+ G +LH + K G S++YV ALV MY G + +
Sbjct: 133 DSHTFPFLLNGLKRDGGALA---CGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMA 189
Query: 129 SKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSN 188
+FD + ++ +WN+MI+G + E E + L EM RN+VS
Sbjct: 190 RGVFDRRCKEDVFSWNLMISGYNRMKEYEESIELLVEME-RNLVS--------------- 233
Query: 189 EALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNC 248
P+ +T+L VL A + D C+ +H Y + T +R+ N
Sbjct: 234 ----------------PTSVTLLLVLSACSKVKDKDLCKRVHEYVSECK-TEPSLRLENA 276
Query: 249 LIDTYAKCGCIFSASKLFEDIS--------------VERKNL---------------VSW 279
L++ YA CG + A ++F + VER NL +SW
Sbjct: 277 LVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISW 336
Query: 280 TSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVE 339
T +I G+ G E++E F MQ G+ P+ T +SVL AC+H G +E G + ++
Sbjct: 337 TIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIG-EWIKTYID 395
Query: 340 ECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMG 399
+ ++ D+ LIDM + G E+A+K + D W ++ + +G G
Sbjct: 396 KNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQR--DKFTWTAMVVGLANNGQ---G 450
Query: 400 ERVTRKILEMER-GYGGDYVLMYNILAGVGRFGDAERLRR 438
+ + +M+ D + +L+ G ++ R+
Sbjct: 451 QEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARK 490
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/250 (20%), Positives = 103/250 (41%), Gaps = 43/250 (17%)
Query: 73 DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLF 132
D FT ++ CA L +G + I K ++ V V AL++MY G + + K+F
Sbjct: 367 DEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVF 426
Query: 133 DEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNV----VSWTGIIDGYTRMNRSN 188
+M +R+ TW M+ GL G+ + A +F +M ++ +++ G++ +
Sbjct: 427 HDMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVD 486
Query: 189 EALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNC 248
+A F KM + EPS L+H YG C
Sbjct: 487 QARKFFAKMRSDHRIEPS---------------------LVH-YG--------------C 510
Query: 249 LIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLK 308
++D + G + A ++ + + ++V W +++ +H E + + + L+
Sbjct: 511 MVDMLGRAGLVKEAYEILRKMPMNPNSIV-WGALLGASRLH--NDEPMAELAAKKILELE 567
Query: 309 PNRVTFLSVL 318
P+ ++L
Sbjct: 568 PDNGAVYALL 577
>gi|255581953|ref|XP_002531775.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223528611|gb|EEF30631.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 498
Score = 260 bits (664), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 141/422 (33%), Positives = 240/422 (56%), Gaps = 13/422 (3%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNL 92
++NT++ L + P Y L L P D++TY+F+++ C+
Sbjct: 54 VYNTMIRGLMLGKRP------YDSLLLFNELLLGCLKP--DNYTYTFVLKACSNQKALPE 105
Query: 93 GTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVK 152
G Q+H I K G + +++++L++MY S G + ++ + E E N + N MI+G +
Sbjct: 106 GKQVHCQIIKAGISPNTHIHSSLIHMYTSSGSIVEAECVLREFSEENTLAKNSMISGYLS 165
Query: 153 WGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILA 212
G ++ AR++F++M ++V SW+ II G T+ EALALF M+ +T P+E +++
Sbjct: 166 KGHVDKARAMFDQMKAKDVASWSAIITGCTKNGMHTEALALFEDMMV-SHTLPNESALVS 224
Query: 213 VLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVE 272
+L A G + + IH Y ++ G IR+ LID YAKCG I S K F +
Sbjct: 225 LLSACAHLGALHQGRWIHAYIDRIG-ADMSIRLSTALIDMYAKCGDIQSGYKFFRKMP-- 281
Query: 273 RKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLN 332
R+++V+W +IISGFA++G K+ E F M G+ PN V F+++L+ACSH G VEEG
Sbjct: 282 RRDIVTWGAIISGFAIYGQAKKCFELFEEMLADGIYPNGVIFVAILSACSHAGYVEEGKL 341
Query: 333 FFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSF 392
+F++M+ + + P I+HYGC++D+LGRAGRL++AE+ + +P E + V+W ++L AC
Sbjct: 342 YFNQMMVDLGIRPSIEHYGCMVDLLGRAGRLKEAEEFIISMP-EKPNSVIWGSMLSACRT 400
Query: 393 HGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCS 452
H ++ G R ++E+E G Y L + G +A ++R++++++ G S
Sbjct: 401 HNDLNRGSWAFRHLIELEPRSGDRYKLAGLMFGNAGEKQEATKIRKMIEDQGMETTSGSS 460
Query: 453 LV 454
+
Sbjct: 461 FI 462
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 114/283 (40%), Gaps = 38/283 (13%)
Query: 146 MITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRS-NEALALFRKMVACEYTE 204
++ V E+ +ARS+FE +P +V + +I G R + L ++ C +
Sbjct: 27 LLESYVTMSEISYARSIFERIPYLDVFVYNTMIRGLMLGKRPYDSLLLFNELLLGC--LK 84
Query: 205 PSEITILAVLPAIWQN-----GDVKSCQ---------------LIHGYGEK--------- 235
P T VL A G CQ LIH Y
Sbjct: 85 PDNYTYTFVLKACSNQKALPEGKQVHCQIIKAGISPNTHIHSSLIHMYTSSGSIVEAECV 144
Query: 236 -RGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKE 294
R F+ + N +I Y G + A +F+ + K++ SW++II+G +GM E
Sbjct: 145 LREFSEENTLAKNSMISGYLSKGHVDKARAMFDQMKA--KDVASWSAIITGCTKNGMHTE 202
Query: 295 AVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLI 354
A+ F M PN +S+L+AC+H G + +G + ++ I+ LI
Sbjct: 203 ALALFEDMMVSHTLPNESALVSLLSACAHLGALHQG-RWIHAYIDRIGADMSIRLSTALI 261
Query: 355 DMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVE 397
DM + G ++ K +P D+V W ++ + +G +
Sbjct: 262 DMYAKCGDIQSGYKFFRKMPRR--DIVTWGAIISGFAIYGQAK 302
>gi|357518907|ref|XP_003629742.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523764|gb|AET04218.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 616
Score = 259 bits (663), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 161/483 (33%), Positives = 250/483 (51%), Gaps = 43/483 (8%)
Query: 3 ILQNSQTPNNITTQIHSHLLTTNSLLHHSQLFNTLLHFYSLAESPQKAFLLYKQLQQIYT 62
I+++ T N Q+H+H+ N+L S + LL F + P Y L +++
Sbjct: 16 IIESHCTTLNHAKQLHAHIYR-NNLHQSSYVITNLLRF--ITTLPHIPVHTYPHL--LFS 70
Query: 63 HSHSPLPPLFD------------------------------SFTYSFLIRTCATLSHPNL 92
HSP P L+ SFT+S L + L +P+L
Sbjct: 71 QVHSPNPFLYSALIRAYARNGPFHHSIRLYTSMLNNNVSPVSFTFSALF---SLLKNPSL 127
Query: 93 GTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVK 152
G+QLH GF + +YV +++MYV G L + K+FDEMP R++VTW +I +
Sbjct: 128 GSQLHLHAFLFGFVNDLYVGNTIIHMYVKFGVLDCARKVFDEMPHRDVVTWTELIVAYAR 187
Query: 153 WGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILA 212
G+++ A LF +P +++V+WT ++ GY++ +AL FRKM EIT++
Sbjct: 188 SGDMDSACELFVGLPVKDMVAWTSMVTGYSQNAMPKKALQFFRKMREAGVVT-DEITLVG 246
Query: 213 VLPAIWQNGDVKSCQLIHGYGEKRGF-TAFDIRVLNCLIDTYAKCGCIFSASKLFEDISV 271
+ A Q G I E F + ++ V + LID Y+KCG + A +F+ +
Sbjct: 247 AISACAQLGVSGYADWIREIAESSRFGSGSNVFVGSALIDMYSKCGNVEEAYNVFK--GM 304
Query: 272 ERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGL 331
+ N+ S++S+I GFA+HG + A++ F M + G+KPN VTF+ + ACSH G+VE+G
Sbjct: 305 KEMNVFSYSSMIVGFAVHGRARSAIKLFYEMLENGIKPNHVTFVGLFTACSHAGMVEQGQ 364
Query: 332 NFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACS 391
F M E V P HY C+ D+LGRAG LE+A + +P E + VW LLGA
Sbjct: 365 QLFGAMKECYGVSPTADHYACMADLLGRAGHLEKALQLVQTMPME-PNGGVWGALLGASH 423
Query: 392 FHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGC 451
HGN ++ E +R + E+E G+Y+L+ A ++ D R+R++M E+ K PGC
Sbjct: 424 IHGNPDVAEIASRSLFELEPDNLGNYLLLSKTYALAAKWDDVSRVRKLMREKQLRKNPGC 483
Query: 452 SLV 454
S V
Sbjct: 484 SWV 486
>gi|357507205|ref|XP_003623891.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498906|gb|AES80109.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1288
Score = 259 bits (663), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 139/382 (36%), Positives = 221/382 (57%), Gaps = 5/382 (1%)
Query: 73 DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLF 132
D+ T ++ C L + + I + + VY+ L++MY + + ++F
Sbjct: 895 DAVTMVKVVLACTVLGEWGVVDAMIEYIEENKVEVDVYLGNTLIDMYGRRSMVDLARRVF 954
Query: 133 DEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALA 192
D M +RN+V+WN MI G K G L AR LF++MP R+V+SWT +I Y++ + +A+
Sbjct: 955 DRMRDRNMVSWNAMIMGYGKAGNLVAARKLFDDMPHRDVISWTSMISSYSQAGQFGKAVR 1014
Query: 193 LFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDT 252
LF++M+ + +P EIT+ +VL A G + + +H Y K A DI V N LID
Sbjct: 1015 LFQEMMVTK-VKPDEITVASVLSACAHIGALDVGEAVHEYIRKYDVNA-DIYVGNALIDM 1072
Query: 253 YAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRV 312
Y KCG + +FE++ +++ VSWTS+I+G A++G A+ F M + G++P
Sbjct: 1073 YCKCGAVEKGLSVFEEMG--KRDSVSWTSVIAGLAVNGSADSALNLFSLMLREGVRPTHG 1130
Query: 313 TFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALG 372
TF+ VL AC+H G+V++GL +F+ M + P++KHYGC++D+L R+G L +A +
Sbjct: 1131 TFVGVLLACAHAGVVDKGLEYFESMERVYGLTPEMKHYGCVVDLLSRSGNLGRAYEFIKR 1190
Query: 373 IPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGD 432
+P + DVVVWR LL A HGN+ + E T+K+LE + G+Y+L N AG R+ D
Sbjct: 1191 MPMD-PDVVVWRILLSASQVHGNLHLAEIATKKLLETDPSNSGNYILSSNTYAGSNRWED 1249
Query: 433 AERLRRVMDERNAFKVPGCSLV 454
++RR+M+E N K S V
Sbjct: 1250 VIKMRRLMEESNVHKPSASSSV 1271
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 113/426 (26%), Positives = 198/426 (46%), Gaps = 81/426 (19%)
Query: 10 PNNITTQIHSHLLTTNSLLHHSQLF-----------NTLLHFYSLAESPQKAFLLYKQLQ 58
P +I + S+ L+ ++L ++LF N ++ +S P +A Y +
Sbjct: 729 PISIFNLLKSYALSPTNILKANELFRQIPRPTLSHWNIMIRGWSQTNQPIEAIRNYNLM- 787
Query: 59 QIYTHSHSPLPPLF-DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVN 117
Y+ + LF ++ TY FL++ CA +S+ + T +HA + K+GF S ++V+ AL++
Sbjct: 788 --YSQA------LFGNNLTYPFLLKACARISNVSC-TTVHARVLKLGFDSDLFVSNALIH 838
Query: 118 MYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGI 177
Y L + K+FDEM ER+LV+WN +I G + +FEEM +V
Sbjct: 839 GYAGFCELGFARKVFDEMSERDLVSWNSLICGYGRCRRYSEVLVVFEEMRMADV------ 892
Query: 178 IDGYTRMNRSNEALALFRKMVAC-------------EYTEPSEITILAVLPAIWQNGDVK 224
+A+ + + ++AC EY E +++ + L
Sbjct: 893 ---------KGDAVTMVKVVLACTVLGEWGVVDAMIEYIEENKVEVDVYL---------- 933
Query: 225 SCQLIHGYGEKRGFTAFDIRVL-----------NCLIDTYAKCGCIFSASKLFEDISVER 273
LI YG +R RV N +I Y K G + +A KLF+D+
Sbjct: 934 GNTLIDMYG-RRSMVDLARRVFDRMRDRNMVSWNAMIMGYGKAGNLVAARKLFDDMP--H 990
Query: 274 KNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNF 333
++++SWTS+IS ++ G +AV F M +KP+ +T SVL+AC+H G ++ G
Sbjct: 991 RDVISWTSMISSYSQAGQFGKAVRLFQEMMVTKVKPDEITVASVLSACAHIGALDVG-EA 1049
Query: 334 FDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEI--TDVVVWRTLLGACS 391
+ + + +V DI LIDM + G +E+ L + E+ D V W +++ +
Sbjct: 1050 VHEYIRKYDVNADIYVGNALIDMYCKCGAVEK----GLSVFEEMGKRDSVSWTSVIAGLA 1105
Query: 392 FHGNVE 397
+G+ +
Sbjct: 1106 VNGSAD 1111
>gi|356513527|ref|XP_003525465.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g47530-like [Glycine max]
Length = 579
Score = 259 bits (663), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 144/422 (34%), Positives = 236/422 (55%), Gaps = 44/422 (10%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+NT++ S+++SPQK LLY+ +++ + D + SF +++C + G
Sbjct: 72 YNTMIRACSMSDSPQKGLLLYRDMRRRGIAA--------DPLSSSFAVKSCIRFLYLPGG 123
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
Q+H I K G Q + TA++++Y D+ K+FDEM
Sbjct: 124 VQVHCNIFKDGHQWDTLLLTAVMDLYSLCQRGGDACKVFDEM------------------ 165
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYT-EPSEITILA 212
P R+ V+W +I R NR+ +AL+LF M Y EP ++T L
Sbjct: 166 -------------PHRDTVAWNVMISCCIRNNRTRDALSLFDVMQGSSYKCEPDDVTCLL 212
Query: 213 VLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVE 272
+L A ++ + IHGY +RG+ + + N LI Y++CGC+ A ++F+ +
Sbjct: 213 LLQACAHLNALEFGERIHGYIMERGYRD-ALNLCNSLISMYSRCGCLDKAYEVFKGMG-- 269
Query: 273 RKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLN 332
KN+VSW+++ISG AM+G G+EA+E F M ++G+ P+ TF VL+ACS+ G+V+EG++
Sbjct: 270 NKNVVSWSAMISGLAMNGYGREAIEAFEEMLRIGVLPDDQTFTGVLSACSYSGMVDEGMS 329
Query: 333 FFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSF 392
FF +M E V P++ HYGC++D+LGRAG L++A + + + + D +WRTLLGAC
Sbjct: 330 FFHRMSREFGVTPNVHHYGCMVDLLGRAGLLDKAYQLIMSMVVK-PDSTMWRTLLGACRI 388
Query: 393 HGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCS 452
HG+V +GERV ++E++ GDYVL+ NI + G + +R++M ++ PGCS
Sbjct: 389 HGHVTLGERVIGHLIELKAQEAGDYVLLLNIYSSAGHWEKVAEVRKLMKNKSIQTTPGCS 448
Query: 453 LV 454
+
Sbjct: 449 TI 450
>gi|224089225|ref|XP_002308660.1| predicted protein [Populus trichocarpa]
gi|222854636|gb|EEE92183.1| predicted protein [Populus trichocarpa]
Length = 487
Score = 259 bits (663), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 143/386 (37%), Positives = 224/386 (58%), Gaps = 36/386 (9%)
Query: 71 LFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSK 130
L + FTY F+++ CA + + NLG +H + K GF V V LV+MY
Sbjct: 7 LPNKFTYPFVLKACAGIGNLNLGKSVHGSVMKFGFGDEVNVQNTLVHMYCC--------- 57
Query: 131 LFDEMPERNLVTWNVMITGLVKWGE--LEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSN 188
+ GE +EFAR +F+EM + VSW+ +I GY R+ RS+
Sbjct: 58 --------------------CRGGEGGIEFARKVFDEMYKSDSVSWSAMIGGYVRVGRSS 97
Query: 189 EALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNC 248
+A+ LFR+M + P EIT+++VL A G ++ + + Y EK ++ + N
Sbjct: 98 DAINLFREM-QIKGVCPDEITMVSVLSACTGLGALELGKWVESYVEKERVQK-NVELSNA 155
Query: 249 LIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLK 308
LID +AKCG + A+ LF S+ +N+VSWTS+I G AMHG G EAV F M + G+
Sbjct: 156 LIDMFAKCGDVDKATNLFR--SMRERNIVSWTSVIGGLAMHGRGVEAVAVFEEMVRSGVT 213
Query: 309 PNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEK 368
P+ V F+ +L+ACSH GLV++G +FD M ++ ++P I+HYGC++DML RAG +++A K
Sbjct: 214 PDDVVFIGLLSACSHSGLVDKGKRYFDSMRKDFSIVPKIEHYGCMVDMLCRAGLVKEALK 273
Query: 369 TALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVG 428
+P + + VVWRTL+ AC HG +++GE++TR+++ E + +YVL+ NI A +
Sbjct: 274 FVQEMPID-PNPVVWRTLINACRAHGELKLGEKITRQLIRNEPMHESNYVLLSNIYAKMS 332
Query: 429 RFGDAERLRRVMDERNAFKVPGCSLV 454
+ R+R MD + K+PG +++
Sbjct: 333 DWEKKTRIREAMDMKGMKKIPGSTMI 358
>gi|15233234|ref|NP_188214.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546758|sp|Q9LSB8.2|PP235_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g15930
gi|332642227|gb|AEE75748.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 687
Score = 259 bits (663), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 134/381 (35%), Positives = 224/381 (58%), Gaps = 5/381 (1%)
Query: 74 SFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFD 133
S T ++ C+ + +L ++H +S+ + + + ALVN Y + G + + ++F
Sbjct: 236 SVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFR 295
Query: 134 EMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALAL 193
M R++++W ++ G V+ G L+ AR+ F++MP R+ +SWT +IDGY R NE+L +
Sbjct: 296 SMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEI 355
Query: 194 FRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTY 253
FR+M + P E T+++VL A G ++ + I Y +K D+ V N LID Y
Sbjct: 356 FREMQSAGMI-PDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKN-DVVVGNALIDMY 413
Query: 254 AKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVT 313
KCGC A K+F D+ ++++ +WT+++ G A +G G+EA++ F +MQ + ++P+ +T
Sbjct: 414 FKCGCSEKAQKVFHDM--DQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDIT 471
Query: 314 FLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGI 373
+L VL+AC+H G+V++ FF KM + + P + HYGC++DMLGRAG +++A + +
Sbjct: 472 YLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEAYEILRKM 531
Query: 374 PSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDA 433
P + +VW LLGA H + M E +KILE+E G Y L+ NI AG R+ D
Sbjct: 532 PMN-PNSIVWGALLGASRLHNDEPMAELAAKKILELEPDNGAVYALLCNIYAGCKRWKDL 590
Query: 434 ERLRRVMDERNAFKVPGCSLV 454
+RR + + K PG SL+
Sbjct: 591 REVRRKIVDVAIKKTPGFSLI 611
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 94/330 (28%), Positives = 148/330 (44%), Gaps = 70/330 (21%)
Query: 73 DSFTYSFLI----RTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDS 128
DS T+ FL+ R L+ G +LH + K G S++YV ALV MY G + +
Sbjct: 133 DSHTFPFLLNGLKRDGGALA---CGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMA 189
Query: 129 SKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSN 188
+FD + ++ +WN+MI+G + E E + L EM RN+VS
Sbjct: 190 RGVFDRRCKEDVFSWNLMISGYNRMKEYEESIELLVEME-RNLVS--------------- 233
Query: 189 EALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNC 248
P+ +T+L VL A + D C+ +H Y + T +R+ N
Sbjct: 234 ----------------PTSVTLLLVLSACSKVKDKDLCKRVHEYVSECK-TEPSLRLENA 276
Query: 249 LIDTYAKCGCIFSASKLFEDIS--------------VERKNL---------------VSW 279
L++ YA CG + A ++F + VER NL +SW
Sbjct: 277 LVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISW 336
Query: 280 TSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVE 339
T +I G+ G E++E F MQ G+ P+ T +SVL AC+H G +E G + ++
Sbjct: 337 TIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIG-EWIKTYID 395
Query: 340 ECEVLPDIKHYGCLIDMLGRAGRLEQAEKT 369
+ ++ D+ LIDM + G E+A+K
Sbjct: 396 KNKIKNDVVVGNALIDMYFKCGCSEKAQKV 425
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 74/156 (47%), Gaps = 4/156 (2%)
Query: 73 DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLF 132
D FT ++ CA L +G + I K ++ V V AL++MY G + + K+F
Sbjct: 367 DEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVF 426
Query: 133 DEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNV----VSWTGIIDGYTRMNRSN 188
+M +R+ TW M+ GL G+ + A +F +M ++ +++ G++ +
Sbjct: 427 HDMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVD 486
Query: 189 EALALFRKMVACEYTEPSEITILAVLPAIWQNGDVK 224
+A F KM + EPS + ++ + + G VK
Sbjct: 487 QARKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVK 522
>gi|125546238|gb|EAY92377.1| hypothetical protein OsI_14107 [Oryza sativa Indica Group]
Length = 602
Score = 259 bits (663), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 140/385 (36%), Positives = 217/385 (56%), Gaps = 39/385 (10%)
Query: 73 DSFTYSFLIRTCATL-SHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLG--FLKDSS 129
+ FT+ FL++ CA L P++G Q HA K GF + YV+ L++MY G FL D
Sbjct: 125 NKFTFPFLLKACAALPGSPDVGLQAHAAALKFGFATDQYVSNTLIHMYSCFGGGFLGD-- 182
Query: 130 KLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNE 189
AR++F+ MP + V+W+ +I GY R S++
Sbjct: 183 -----------------------------ARNVFDRMPKESAVTWSAMIGGYVRGGLSSD 213
Query: 190 ALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCL 249
A+ LFR+M A + E+T++ VL A G ++ + + + E+ G + + N L
Sbjct: 214 AVELFREMQA-NGVQADEVTVIGVLAAATDLGALELARWVRRFVEREGIGK-SVTLCNAL 271
Query: 250 IDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKP 309
IDT AKCG + A +FE ++++++VSWTS+I AM G GKEAV F M+ G+ P
Sbjct: 272 IDTLAKCGDVDGAVAVFE--GMQQRSVVSWTSVIDALAMEGRGKEAVRVFEEMKVAGVPP 329
Query: 310 NRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKT 369
+ V F+ VL ACSH G+V+EG +FD M E + P I+HYGC++DM GRAG +E+A +
Sbjct: 330 DDVAFIGVLTACSHAGMVDEGCGYFDAMKVEYGIEPKIEHYGCMVDMFGRAGMVERAMEF 389
Query: 370 ALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGR 429
+P + + V+WR+L+ AC HG +E+GE +TR +L + +Y+++ N+ A R
Sbjct: 390 VRTMPIQ-PNPVIWRSLVSACRAHGRLELGESITRSLLHEYPAHEANYIMLSNVFALTQR 448
Query: 430 FGDAERLRRVMDERNAFKVPGCSLV 454
+ + +RR M +R KVPGCS+V
Sbjct: 449 WKEKSEIRREMSKRGIKKVPGCSIV 473
>gi|357444867|ref|XP_003592711.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355481759|gb|AES62962.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 550
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 142/421 (33%), Positives = 239/421 (56%), Gaps = 12/421 (2%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+N ++ YS +++P + ++ ++ + H +P D TY FL++ A LS G
Sbjct: 82 WNIIIRGYSNSKNPIHSLSIFLKMLR---HGVAP-----DYLTYPFLVKASARLSKQKSG 133
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
+HA I K G +S ++ +L++MY S G + + K+F+ M +NLV+WN M+ G K
Sbjct: 134 VSVHAQIIKTGHESDRFIQNSLIHMYASCGNIMWAHKVFESMQGKNLVSWNSMLDGYAKC 193
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
GE+ A+ +FE M R+V SW+ IDGY + EA+A+F KM A + +E+T+++V
Sbjct: 194 GEMAMAQKVFESMQERDVRSWSSFIDGYVKAGEYREAMAVFEKMRAVG-PKANEVTMVSV 252
Query: 214 LPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVER 273
L A G ++ +++H Y + + L+D YAKCG I A +F IS +
Sbjct: 253 LSACAHLGALQKGRMMHQY-IIDNLLPMTMVLQTSLVDMYAKCGAIEEALFVFRGISKSQ 311
Query: 274 KNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNF 333
++ W ++I G A HG+ +E+++ F MQ G++ + +T+L +L AC+HGGLV+E NF
Sbjct: 312 TDVFIWNAMIGGLATHGLVEESLKLFKEMQMAGIRSDEITYLCLLAACAHGGLVKEAWNF 371
Query: 334 FDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFH 393
F+ +V+ + P +HY C++D+L RAG+L A + IP E T ++ + C H
Sbjct: 372 FESLVKR-GMTPTSEHYACMVDVLARAGQLTTAYQFICQIPIEPTASML-GAIFSGCINH 429
Query: 394 GNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSL 453
N ++ E V RK++E++ G Y+ + N+ A V R+ D++ +R M+ R K PG S
Sbjct: 430 RNFDLAETVGRKLIELDPNNDGRYIGLSNVYAVVKRWDDSKSMREAMERRGVKKSPGFSF 489
Query: 454 V 454
V
Sbjct: 490 V 490
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 80/280 (28%), Positives = 137/280 (48%), Gaps = 34/280 (12%)
Query: 148 TGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKM----VACEY- 202
+ L G+++++ +F ++ + SW II GY+ +L++F KM VA +Y
Sbjct: 56 SALSNSGDIDYSYRVFSQISSPTIFSWNIIIRGYSNSKNPIHSLSIFLKMLRHGVAPDYL 115
Query: 203 -------------TEPSEITILAVLPAIWQNGD-VKSCQLIHGYGE-------KRGFTAF 241
+ S +++ A + D LIH Y + F +
Sbjct: 116 TYPFLVKASARLSKQKSGVSVHAQIIKTGHESDRFIQNSLIHMYASCGNIMWAHKVFESM 175
Query: 242 DIRVL---NCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVEN 298
+ L N ++D YAKCG + A K+FE S++ +++ SW+S I G+ G +EA+
Sbjct: 176 QGKNLVSWNSMLDGYAKCGEMAMAQKVFE--SMQERDVRSWSSFIDGYVKAGEYREAMAV 233
Query: 299 FGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLP-DIKHYGCLIDML 357
F +M+ VG K N VT +SVL+AC+H G +++G +++ +LP + L+DM
Sbjct: 234 FEKMRAVGPKANEVTMVSVLSACAHLGALQKGRMMHQYIID--NLLPMTMVLQTSLVDMY 291
Query: 358 GRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVE 397
+ G +E+A GI TDV +W ++G + HG VE
Sbjct: 292 AKCGAIEEALFVFRGISKSQTDVFIWNAMIGGLATHGLVE 331
>gi|297797141|ref|XP_002866455.1| hypothetical protein ARALYDRAFT_496347 [Arabidopsis lyrata subsp.
lyrata]
gi|297312290|gb|EFH42714.1| hypothetical protein ARALYDRAFT_496347 [Arabidopsis lyrata subsp.
lyrata]
Length = 1401
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 147/417 (35%), Positives = 237/417 (56%), Gaps = 24/417 (5%)
Query: 34 FNTLLHFYSLAE----SPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSH 89
FNT++ Y+L E S Q+ F+ ++ +PP F TY F+ + CA +
Sbjct: 496 FNTIIRIYTLHEPLSLSSQRFFVEMRRRS---------VPPDF--HTYPFVFKACAAKKN 544
Query: 90 PNLG--TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMI 147
+L LH + G S ++ L+ Y + + + +LFDE P+R++VT+NV+I
Sbjct: 545 GDLSLVKTLHCQALRFGLLSDLFTLNTLIRAYSLMAPIGSALQLFDENPQRDVVTYNVLI 604
Query: 148 TGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSE 207
GLVK E+ AR LF+ MP R++VSW +I GY +MN+ EA++LF +M+ +P
Sbjct: 605 DGLVKACEIVRARELFDSMPFRDLVSWNSLIAGYAQMNQCREAISLFDEMIGLGL-KPDN 663
Query: 208 ITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFE 267
+ I++ L A Q+GD++ + IH Y +K+ D + L+D YAKCG I +A ++F
Sbjct: 664 VAIVSTLSACAQSGDLEKGKAIHDYTKKKRLF-IDSFLATGLVDFYAKCGFIDTAMEIFH 722
Query: 268 DISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLV 327
S K L +W ++I+G AMHG G+ V+ F +M G+KP+ V+F+SVL CSH GLV
Sbjct: 723 LSS--DKTLFTWNAMITGLAMHGNGELTVDYFHKMVSSGIKPDGVSFISVLVGCSHSGLV 780
Query: 328 EEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSE---ITDVVVWR 384
E FD+M +V ++KHYGC+ D+LGRAG +E+A + +P + ++ W
Sbjct: 781 GEARKLFDQMRSLYDVDREMKHYGCMADLLGRAGLIEEAAEMIEQMPKDGGKREKLLAWS 840
Query: 385 TLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMD 441
LLG C HGN+E+ E+ +++ + GG Y +M + A R+ D ++R +++
Sbjct: 841 GLLGGCRIHGNIEVAEKAAKRVKALSPEDGGVYKVMVEMYANAERWEDVVKVREMIE 897
>gi|395146511|gb|AFN53666.1| hypothetical protein [Linum usitatissimum]
Length = 850
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 146/422 (34%), Positives = 236/422 (55%), Gaps = 13/422 (3%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+N+++ + P KA L+++++ H ++ T ++ CA + LG
Sbjct: 311 WNSMVTGFVQGGYPDKALDLFERMRNEGVHP--------NAVTMVSVMSACAKTMNLTLG 362
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
++ I + ++ V A ++M+V G ++ + LFD M +R++V+W +I G K
Sbjct: 363 RKVCDYIDRNEMMMNLNVCNATIDMFVKCGEVEIARGLFDNMEKRDVVSWTTIIDGYAKM 422
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEY-TEPSEITILA 212
E AR +F+ MP +++ +W +I GY + R EALA+FR++ + P ++T+L+
Sbjct: 423 SEHGIARDIFDSMPRKDIPAWNVLISGYEQSGRPKEALAIFRELQLTKSGARPDQVTLLS 482
Query: 213 VLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVE 272
L A Q G + + IHGY +K + + LID Y+K G + A ++F S+
Sbjct: 483 TLSACAQLGAMDIGEWIHGYIKKERIQ-LNRNLATSLIDMYSKSGDVEKAIEVFH--SIG 539
Query: 273 RKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLN 332
K++ W+++I+G AMHG G+ A+E F MQ+ +KPN VTF ++L ACSH GLV+EG
Sbjct: 540 NKDVFVWSAMIAGLAMHGRGEAAIELFLDMQETQVKPNSVTFTNLLCACSHSGLVDEGKR 599
Query: 333 FFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSF 392
FD+M V+P KHY C++D+LGRAG LE+A K G+P + VW LLGAC
Sbjct: 600 LFDEMERVYGVVPKTKHYSCMVDVLGRAGHLEEALKFIEGMPLAPS-ASVWGALLGACCI 658
Query: 393 HGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCS 452
HGN+E+ E+ ++LE+E G G YVL+ N+ A G + LR+ M + K GCS
Sbjct: 659 HGNLELAEKACSRLLEIEPGNHGAYVLLSNLYAKTGDWEGVSELRQQMRDSGLKKETGCS 718
Query: 453 LV 454
+
Sbjct: 719 SI 720
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 117/425 (27%), Positives = 202/425 (47%), Gaps = 44/425 (10%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+N L+ + + P ++ L++ ++ SP P + FT+ LI+ A +G
Sbjct: 207 WNILIRALATSSDPIQSVLVFIRMLH-----DSPFGP--NKFTFPVLIKAVAERRCFLVG 259
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPE---RNLVTWNVMITGL 150
+H + K F V+V +L++ Y S G L D + L EM E +++V+WN M+TG
Sbjct: 260 KAVHGMAIKTSFGDDVFVLNSLIHFYASCGHL-DLAYLVFEMIEGNNKDIVSWNSMVTGF 318
Query: 151 VKWGELEFARSLFEEMPCR----NVVSWTGIIDGYTR-MNRSNEALALFRKMVACEYTEP 205
V+ G + A LFE M N V+ ++ + MN L L RK+ C+Y +
Sbjct: 319 VQGGYPDKALDLFERMRNEGVHPNAVTMVSVMSACAKTMN-----LTLGRKV--CDYIDR 371
Query: 206 SEITI-----LAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIF 260
+E+ + A + + G+V+ + + EKR D+ +ID YAK
Sbjct: 372 NEMMMNLNVCNATIDMFVKCGEVEIARGLFDNMEKR-----DVVSWTTIIDGYAKMSEHG 426
Query: 261 SASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQ--KVGLKPNRVTFLSVL 318
A +F+ S+ RK++ +W +ISG+ G KEA+ F +Q K G +P++VT LS L
Sbjct: 427 IARDIFD--SMPRKDIPAWNVLISGYEQSGRPKEALAIFRELQLTKSGARPDQVTLLSTL 484
Query: 319 NACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEIT 378
+AC+ G ++ G + +++ + + LIDM ++G +E+A + I ++
Sbjct: 485 SACAQLGAMDIG-EWIHGYIKKERIQLNRNLATSLIDMYSKSGDVEKAIEVFHSIGNK-- 541
Query: 379 DVVVWRTLLGACSFHGNVEMGERVTRKILEM-ERGYGGDYVLMYNILAGVGRFGDAERLR 437
DV VW ++ + HG GE L+M E + V N+L G + +
Sbjct: 542 DVFVWSAMIAGLAMHGR---GEAAIELFLDMQETQVKPNSVTFTNLLCACSHSGLVDEGK 598
Query: 438 RVMDE 442
R+ DE
Sbjct: 599 RLFDE 603
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 136/282 (48%), Gaps = 14/282 (4%)
Query: 128 SSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRS 187
++KL D L T + L++AR +F+++P N+ SW +I +
Sbjct: 165 TNKLHDPYAASELFT----AAAFSSFSALDYARKVFDQIPQPNLYSWNILIRALATSSDP 220
Query: 188 NEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLN 247
+++ +F +M+ P++ T ++ A+ + + +HG K F D+ VLN
Sbjct: 221 IQSVLVFIRMLHDSPFGPNKFTFPVLIKAVAERRCFLVGKAVHGMAIKTSF-GDDVFVLN 279
Query: 248 CLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGL 307
LI YA CG + A +FE I K++VSW S+++GF G +A++ F RM+ G+
Sbjct: 280 SLIHFYASCGHLDLAYLVFEMIEGNNKDIVSWNSMVTGFVQGGYPDKALDLFERMRNEGV 339
Query: 308 KPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAE 367
PN VT +SV++AC+ + G D ++ E++ ++ IDM + G +E A
Sbjct: 340 HPNAVTMVSVMSACAKTMNLTLGRKVCD-YIDRNEMMMNLNVCNATIDMFVKCGEVEIAR 398
Query: 368 KTALGIPSEITDVVVWRTLLGACSFHGNVEMGER-VTRKILE 408
L E DVV W T++ G +M E + R I +
Sbjct: 399 --GLFDNMEKRDVVSWTTII-----DGYAKMSEHGIARDIFD 433
>gi|297805648|ref|XP_002870708.1| hypothetical protein ARALYDRAFT_493946 [Arabidopsis lyrata subsp.
lyrata]
gi|297316544|gb|EFH46967.1| hypothetical protein ARALYDRAFT_493946 [Arabidopsis lyrata subsp.
lyrata]
Length = 1111
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 150/442 (33%), Positives = 244/442 (55%), Gaps = 16/442 (3%)
Query: 18 HSHLLTTNSLLHHSQ---LF--NTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLF 72
H++L N +L S LF N+++ + + P+K+F Y ++ S + L P
Sbjct: 61 HTYLDYANQILDRSDKPTLFALNSMIRAHCKSPVPEKSFDFYSRILS----SGNGLKP-- 114
Query: 73 DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLF 132
D++T +FL++ C L G Q+H + + GF + +V T L+++Y LG L K+F
Sbjct: 115 DNYTVNFLVQACTGLGMRETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVF 174
Query: 133 DEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALA 192
+ + + V M+T + G++ FAR LFE MP ++ ++W +I GY ++ S EAL
Sbjct: 175 NSVSYPDFVCRTAMVTACARCGDVAFARKLFEGMPEKDPIAWNAMISGYAQVGESREALN 234
Query: 193 LFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDT 252
LF M E + + +++++VL A Q G + + H Y E R +R+ L+D
Sbjct: 235 LFHLM-QLEGVKVNGVSMISVLSACTQLGALDQGRWAHSYIE-RNKIKITVRLGTTLVDL 292
Query: 253 YAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRV 312
YAKCG + A ++F +E KN+ +W+S ++G AM+G G++ ++ F M++ G+ PN V
Sbjct: 293 YAKCGDMDKAMEVF--WGMEEKNVYTWSSALNGLAMNGFGEKCLKLFSLMKQDGVTPNAV 350
Query: 313 TFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALG 372
TF+SVL CS G V+EG FD M E + P + HYGCL+D+ RAGRLE A
Sbjct: 351 TFVSVLRGCSVVGFVDEGQKHFDSMRNEFGIEPQLDHYGCLVDLYARAGRLEDAVSIIQQ 410
Query: 373 IPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGD 432
+P + VW +LL A + N+E+G ++K+LE+E G YVL+ NI A + +
Sbjct: 411 MPMK-AHAAVWSSLLHASRMYKNLELGVLASKKMLELETSNHGAYVLLSNIYADSDDWDN 469
Query: 433 AERLRRVMDERNAFKVPGCSLV 454
+R+ M + K PGCS++
Sbjct: 470 VSHVRQSMKSKGVRKQPGCSVM 491
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 119/382 (31%), Positives = 198/382 (51%), Gaps = 36/382 (9%)
Query: 73 DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLF 132
+ T+ +I C + G +H ++ K G V V AL+N+Y G L S KLF
Sbjct: 636 NEVTFLSMISACVHGGNKEEGVCIHGLVMKSGVLEEVKVVNALMNLYGKTGDLISSCKLF 695
Query: 133 DEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALA 192
+++ +NLV+WN MI ++ G E + F N+ W G+
Sbjct: 696 EDLSVKNLVSWNTMIVIHLQNGLAEEGLAYF------NMSRWVGL--------------- 734
Query: 193 LFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDT 252
+P + T LAVL G V+ Q IHG GF A + + L+D
Sbjct: 735 -----------KPDQATFLAVLRVCEDIGVVRLSQGIHGLIMFCGFNA-NTCITTALLDL 782
Query: 253 YAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRV 312
YAK G + +S +F +I+ + ++WT++++ +A HG G++A+++F M GL P+ V
Sbjct: 783 YAKLGRLEDSSTVFLEIT--SPDSMAWTAMLAAYATHGYGRDAIKHFELMVHYGLSPDHV 840
Query: 313 TFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALG 372
TF +LNACSH GLVEEG +F+ M + + P + HY C++D++GR+G L+ A
Sbjct: 841 TFTHLLNACSHSGLVEEGRYYFETMSKRYRIEPRLDHYSCMVDLMGRSGLLQDAYGLIKE 900
Query: 373 IPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGD 432
+P E + VW LLGAC + + ++G + +++ E+E G +Y+++ NI + G + D
Sbjct: 901 MPMEPSS-GVWGALLGACRVYKDTQLGTKAAKRLFELEPRDGRNYIMLSNIYSASGLWKD 959
Query: 433 AERLRRVMDERNAFKVPGCSLV 454
A R+R +M ++ + G S +
Sbjct: 960 ASRIRNLMKQKGLVRASGYSYI 981
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/192 (33%), Positives = 105/192 (54%), Gaps = 10/192 (5%)
Query: 205 PSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASK 264
P+E+T L+++ A G+ + IHG K G +++V+N L++ Y K G + S+ K
Sbjct: 635 PNEVTFLSMISACVHGGNKEEGVCIHGLVMKSGVLE-EVKVVNALMNLYGKTGDLISSCK 693
Query: 265 LFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHG 324
LFED+SV KNLVSW ++I +G+ +E + F + VGLKP++ TFL+VL C
Sbjct: 694 LFEDLSV--KNLVSWNTMIVIHLQNGLAEEGLAYFNMSRWVGLKPDQATFLAVLRVCEDI 751
Query: 325 GLVE--EGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVV 382
G+V +G++ ++ C + L+D+ + GRLE + L I S D +
Sbjct: 752 GVVRLSQGIH---GLIMFCGFNANTCITTALLDLYAKLGRLEDSSTVFLEITS--PDSMA 806
Query: 383 WRTLLGACSFHG 394
W +L A + HG
Sbjct: 807 WTAMLAAYATHG 818
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 53/93 (56%), Gaps = 5/93 (5%)
Query: 297 ENFGRMQK--VGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLI 354
E RM + VG +PN VTFLS+++AC HGG EEG+ +V + VL ++K L+
Sbjct: 621 EVLSRMMRSEVGFRPNEVTFLSMISACVHGGNKEEGVCIHG-LVMKSGVLEEVKVVNALM 679
Query: 355 DMLGRAGRLEQAEKTALGIPSEITDVVVWRTLL 387
++ G+ G L + K + + ++V W T++
Sbjct: 680 NLYGKTGDLISSCKLFEDL--SVKNLVSWNTMI 710
>gi|225457315|ref|XP_002281558.1| PREDICTED: pentatricopeptide repeat-containing protein At2g02980
[Vitis vinifera]
gi|297733922|emb|CBI15169.3| unnamed protein product [Vitis vinifera]
Length = 615
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 155/449 (34%), Positives = 239/449 (53%), Gaps = 51/449 (11%)
Query: 13 ITTQIHSHLLTTNSLLH-------HSQLFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSH 65
I + SH ++LL S L N+++ Y+ + + +Y Q+ + +
Sbjct: 82 IDFSVSSHGFAASALLFTQFYGFIDSDLCNSMIRCYTDSNKHLHSVFIYTQMWK-----N 136
Query: 66 SPLPPLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFL 125
P DS T+ ++++ A L LG +H I ++GF+S+VYV+TALVNMY + +
Sbjct: 137 GIFP---DSSTFPTVLKSVAQLCRQELGKAIHCCIIQMGFESNVYVSTALVNMYGTCSSV 193
Query: 126 KDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMN 185
D AR +F+E+P RN+VSW +I GY
Sbjct: 194 SD-------------------------------ARQVFDEIPDRNIVSWNALITGYNHNR 222
Query: 186 RSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRV 245
+ + +FR+M +P E+T++ VL A G + + I Y + ++ V
Sbjct: 223 MFRKVIDVFREMQIAG-AKPVEVTMVGVLLACAHLGALNQGRWIDDYIDHNRLR-LNVFV 280
Query: 246 LNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKV 305
LID YAKCG + A K+F+ + V KN+ +W +ISG+AM+G G+ A++ F RM
Sbjct: 281 GTALIDMYAKCGVVDEAEKIFKAMRV--KNVYTWNVLISGYAMNGRGESALQAFSRMIME 338
Query: 306 GLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQ 365
KP+ VTFL VL AC H GLV EG +F M EE + P I+HYGC++D+LGRAG L++
Sbjct: 339 KFKPDEVTFLGVLCACCHQGLVNEGRTYFTSMKEEFGLRPRIEHYGCMVDLLGRAGFLDE 398
Query: 366 AEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILA 425
A++ + + D ++WR LLGAC HGN+++GE +K+LE+E G +YVL+ N+ A
Sbjct: 399 AQQLIQAMSMQ-PDPIIWRELLGACRIHGNIQLGEFAIKKLLELEPNNGENYVLLANLYA 457
Query: 426 GVGRFGDAERLRRVMDERNAFKVPGCSLV 454
R+ +R +MD R KVPGCS +
Sbjct: 458 RDQRWDKVGEVREMMDCRRVRKVPGCSSI 486
>gi|115456255|ref|NP_001051728.1| Os03g0821700 [Oryza sativa Japonica Group]
gi|29124127|gb|AAO65868.1| hypothetical protein [Oryza sativa Japonica Group]
gi|108711802|gb|ABF99597.1| expressed protein [Oryza sativa Japonica Group]
gi|113550199|dbj|BAF13642.1| Os03g0821700 [Oryza sativa Japonica Group]
gi|125588431|gb|EAZ29095.1| hypothetical protein OsJ_13153 [Oryza sativa Japonica Group]
gi|215736898|dbj|BAG95827.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 602
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 140/385 (36%), Positives = 217/385 (56%), Gaps = 39/385 (10%)
Query: 73 DSFTYSFLIRTCATL-SHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLG--FLKDSS 129
+ FT+ FL++ CA L P++G Q HA K GF + YV+ L++MY G FL D
Sbjct: 125 NKFTFPFLLKACAALPGSPDVGLQAHAAALKFGFATDQYVSNTLIHMYSCFGGGFLGD-- 182
Query: 130 KLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNE 189
AR++F+ MP + V+W+ +I GY R S++
Sbjct: 183 -----------------------------ARNVFDRMPKESAVTWSAMIGGYVRGGLSSD 213
Query: 190 ALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCL 249
A+ LFR+M A + E+T++ VL A G ++ + + + E+ G + + N L
Sbjct: 214 AVDLFREMQA-NGVQADEVTVIGVLAAATDLGALELARWVRRFVEREGIGK-SVTLCNAL 271
Query: 250 IDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKP 309
IDT AKCG + A +FE ++++++VSWTS+I AM G GKEAV F M+ G+ P
Sbjct: 272 IDTLAKCGDVDGAVAVFE--GMQQRSVVSWTSVIDALAMEGRGKEAVRVFEEMKVAGVPP 329
Query: 310 NRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKT 369
+ V F+ VL ACSH G+V+EG +FD M E + P I+HYGC++DM GRAG +E+A +
Sbjct: 330 DDVAFIGVLTACSHAGMVDEGCGYFDAMKVEYGIEPKIEHYGCMVDMFGRAGMVERAMEF 389
Query: 370 ALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGR 429
+P + + V+WR+L+ AC HG +E+GE +TR +L + +Y+++ N+ A R
Sbjct: 390 VRTMPIQ-PNPVIWRSLVSACRAHGRLELGESITRSLLHEYPAHEANYIMLSNVFALTQR 448
Query: 430 FGDAERLRRVMDERNAFKVPGCSLV 454
+ + +RR M +R KVPGCS+V
Sbjct: 449 WKEKSEIRREMSKRGIKKVPGCSIV 473
>gi|225457409|ref|XP_002282049.1| PREDICTED: pentatricopeptide repeat-containing protein At3g47530
[Vitis vinifera]
Length = 643
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 143/422 (33%), Positives = 240/422 (56%), Gaps = 44/422 (10%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+N ++ YS++ SP++ F LY+++++ +PP + + SF++++C +S G
Sbjct: 136 YNVMIRAYSMSHSPEQGFYLYREMRR------RGVPP--NPLSSSFVMKSCIRISSLMGG 187
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
Q+HA I + G QS + T L+++Y +++ K+FDE+P+ W
Sbjct: 188 LQIHARILRDGHQSDNLLLTTLMDLYSCCDKFEEACKVFDEIPQ---------------W 232
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVA-CEYTEPSEITILA 212
+ VSW +I R+ +AL +F M + + EP ++T L
Sbjct: 233 ----------------DTVSWNVLISCCIHNRRTRDALRMFDIMQSTADGFEPDDVTCLL 276
Query: 213 VLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVE 272
+L A G ++ + +H Y E+ G+ + + N LI Y++CG + A +F+ ++
Sbjct: 277 LLQACANLGALEFGERVHNYIEEHGYDGA-LNLCNSLITMYSRCGRLEKAYSIFK--RMD 333
Query: 273 RKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLN 332
+N+VSW+++ISGFAMHG G+EA+E F +MQ++G+ P+ T VL+ACSH GLV++GL
Sbjct: 334 ERNVVSWSAMISGFAMHGYGREAIEAFEQMQQLGVSPDDQTLTGVLSACSHCGLVDDGLM 393
Query: 333 FFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSF 392
FFD+M + + P+I HYGC++D+LGRAG L+QA + + + + D +WRTLLGAC
Sbjct: 394 FFDRMSKVFGIEPNIHHYGCMVDLLGRAGLLDQAYQLIMSMVIK-PDSTLWRTLLGACRI 452
Query: 393 HGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCS 452
H + +GERV ++E++ GDYVL+ NI + VG + LR+ M E+ PGCS
Sbjct: 453 HRHATLGERVIGHLIELKAQEAGDYVLLLNIYSSVGNWDKVTDLRKFMKEKGIQTSPGCS 512
Query: 453 LV 454
+
Sbjct: 513 TI 514
>gi|357447703|ref|XP_003594127.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|124365519|gb|ABN09753.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355483175|gb|AES64378.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 727
Score = 259 bits (661), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 140/373 (37%), Positives = 205/373 (54%), Gaps = 3/373 (0%)
Query: 80 LIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERN 139
L+ C + G QLH + K GF + ++ T ++ Y + G + + F+ + +
Sbjct: 323 LVSACGRGTAIVDGWQLHGTVVKRGFDCYNFIQTTIIYFYAACGMMDLACLQFEVGVKDH 382
Query: 140 LVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVA 199
L +WN + G +K G ++ A F++M R+V SW+ +I GY + AL LF KM+A
Sbjct: 383 LESWNALTAGFIKNGMMDHALKTFDKMHVRDVFSWSTMISGYAQSEHPKMALELFHKMLA 442
Query: 200 CEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCI 259
+P+E+T+++V AI G ++ +L H Y F+ + LID YAKCG I
Sbjct: 443 GG-IKPNEVTMVSVFSAIATLGTLQEGKLAHEYMRSESI-PFNDNLRAALIDMYAKCGSI 500
Query: 260 FSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLN 319
SA + F I E ++ W +II G A HG +E F MQ+ +KPN +TF+ VL+
Sbjct: 501 NSALQFFNQIRDEVSSVSPWNAIICGLASHGHASMCLEVFSDMQRFHIKPNPITFIGVLS 560
Query: 320 ACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITD 379
AC H GLVE G F M V PDIKHYGC+ID+LGRAG LE+AE+ +P E D
Sbjct: 561 ACCHAGLVESGKRIFKTMKSAYNVEPDIKHYGCMIDILGRAGLLEEAEEMIRSMPME-AD 619
Query: 380 VVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRV 439
+V+W TLL AC HGNV +GER + + +GG VL+ NI A G++ + +R V
Sbjct: 620 IVIWGTLLAACRTHGNVNIGERAAENLARLAPSHGGGKVLLSNIYANAGKWEEVSFVRSV 679
Query: 440 MDERNAFKVPGCS 452
M + + PG S
Sbjct: 680 MQGQTMDREPGYS 692
Score = 151 bits (381), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 104/356 (29%), Positives = 173/356 (48%), Gaps = 34/356 (9%)
Query: 73 DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLF 132
+ T +I C+ L +H ++ K+ V V+T L++ Y ++++ +LF
Sbjct: 184 NDLTLVNVISACSHLGEVLNCRMVHGLVVKMFVVGLVIVSTNLMHAYCLCSGVREARRLF 243
Query: 133 DEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALA 192
DEMPERNLVTWNVM+ G K G ++ AR LF+ + ++V+SW +IDGY + R EAL
Sbjct: 244 DEMPERNLVTWNVMLNGYAKTGLVDEARELFDGICDKDVISWGTMIDGYIQKGRLREALE 303
Query: 193 LFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFD---------- 242
++R M+ + P+E+ I+ ++ A + + +HG KRGF ++
Sbjct: 304 IYRAMLQTGHG-PNEVMIVNLVSACGRGTAIVDGWQLHGTVVKRGFDCYNFIQTTIIYFY 362
Query: 243 --------------------IRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSI 282
+ N L + K G + A K F+ + V +++ SW+++
Sbjct: 363 AACGMMDLACLQFEVGVKDHLESWNALTAGFIKNGMMDHALKTFDKMHV--RDVFSWSTM 420
Query: 283 ISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECE 342
ISG+A K A+E F +M G+KPN VT +SV +A + G ++EG + M E
Sbjct: 421 ISGYAQSEHPKMALELFHKMLAGGIKPNEVTMVSVFSAIATLGTLQEGKLAHEYMRSESI 480
Query: 343 VLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEM 398
D LIDM + G + A + I E++ V W ++ + HG+ M
Sbjct: 481 PFND-NLRAALIDMYAKCGSINSALQFFNQIRDEVSSVSPWNAIICGLASHGHASM 535
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 155/290 (53%), Gaps = 33/290 (11%)
Query: 81 IRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNL 140
+++C++LS + G Q+H++I K+G + ++ +L+NMY G +K++ LFD +
Sbjct: 60 LKSCSSLSFISQGRQIHSLIFKLGLHFNTFIQNSLINMYAKCGDIKNAQLLFDGFATLDS 119
Query: 141 VTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVAC 200
V+ N+M++G V+ G+++ AR LF+ MP + VS+T +I G+ + EAL +F+ M +C
Sbjct: 120 VSCNIMVSGYVRNGQIDNARKLFDVMPNKGCVSYTTMIMGFVQNGFFREALEVFKDMRSC 179
Query: 201 EYTEPSEITILAVLPAIWQNGDVKSCQLIHGY------------------------GEKR 236
P+++T++ V+ A G+V +C+++HG G +
Sbjct: 180 GVV-PNDLTLVNVISACSHLGEVLNCRMVHGLVVKMFVVGLVIVSTNLMHAYCLCSGVRE 238
Query: 237 GFTAFD------IRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHG 290
FD + N +++ YAK G + A +LF+ I K+++SW ++I G+ G
Sbjct: 239 ARRLFDEMPERNLVTWNVMLNGYAKTGLVDEARELFDGIC--DKDVISWGTMIDGYIQKG 296
Query: 291 MGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEE 340
+EA+E + M + G PN V +++++AC G + +G +V+
Sbjct: 297 RLREALEIYRAMLQTGHGPNEVMIVNLVSACGRGTAIVDGWQLHGTVVKR 346
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 104/240 (43%), Gaps = 13/240 (5%)
Query: 73 DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLF 132
D F++S +I A HP + +L + G + + ++ + +LG L++ KL
Sbjct: 413 DVFSWSTMISGYAQSEHPKMALELFHKMLAGGIKPNEVTMVSVFSAIATLGTLQE-GKLA 471
Query: 133 DEMPERNLVTWN-----VMITGLVKWGELEFARSLFEEM--PCRNVVSWTGIIDGYTRMN 185
E + +N +I K G + A F ++ +V W II G
Sbjct: 472 HEYMRSESIPFNDNLRAALIDMYAKCGSINSALQFFNQIRDEVSSVSPWNAIICGLASHG 531
Query: 186 RSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRV 245
++ L +F M + +P+ IT + VL A G V+S + I + DI+
Sbjct: 532 HASMCLEVFSDMQRF-HIKPNPITFIGVLSACCHAGLVESGKRIFKTMKSAYNVEPDIKH 590
Query: 246 LNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHG---MGKEAVENFGRM 302
C+ID + G + A ++ + +E ++V W ++++ HG +G+ A EN R+
Sbjct: 591 YGCMIDILGRAGLLEEAEEMIRSMPME-ADIVIWGTLLAACRTHGNVNIGERAAENLARL 649
>gi|125574942|gb|EAZ16226.1| hypothetical protein OsJ_31678 [Oryza sativa Japonica Group]
Length = 387
Score = 259 bits (661), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 133/339 (39%), Positives = 211/339 (62%), Gaps = 7/339 (2%)
Query: 118 MYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGI 177
MY + + +LFDE+P N V+WN ++ G K +L AR +F MP R+VVSW+ +
Sbjct: 1 MYAACALPGLARRLFDEIPRPNHVSWNALLDGYAKCRDLPAARRVFARMPQRDVVSWSAM 60
Query: 178 IDGYTRMNRSNEALALFRKMVAC----EYTEPSEITILAVLPAIWQNGDVKSCQLIHGYG 233
IDG + EALA+F M A + +++T+++VL A GD+ + +H Y
Sbjct: 61 IDGCVKCGEHREALAVFEMMEATAARHDGVRANDVTMVSVLGACAHLGDLVRGRKMHRYL 120
Query: 234 EKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGK 293
E+ GF +IR+ L+D YAKCG I A ++F+ + VE +++ W ++I G A+HGM +
Sbjct: 121 EEHGFP-LNIRLATSLVDMYAKCGAIVEALEVFQAVPVENTDVLIWNAVIGGLAVHGMSR 179
Query: 294 EAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCL 353
E+++ F +M+ G+ P+ +T+LS+L+AC HGGLV+E +FF + +E + P ++HY CL
Sbjct: 180 ESLQMFQKMEHAGVVPDEITYLSLLSACVHGGLVDEAWSFF-RSLEAQGLRPHVEHYACL 238
Query: 354 IDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGY 413
+D+LGRAGRLE+A +P + + V V LL AC HG VE+GE V R+++ ++ +
Sbjct: 239 VDVLGRAGRLEEAYGVVKSMPMKPS-VSVLGALLNACHLHGWVELGEAVGRQLVHLQPDH 297
Query: 414 GGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCS 452
G Y+ + NI A R+ +A++ R+VM+ER KVPG S
Sbjct: 298 DGRYIGLSNIYAVARRWQEAKKARKVMEERGVKKVPGFS 336
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 100/240 (41%), Gaps = 38/240 (15%)
Query: 73 DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLF 132
+ T ++ CA L G ++H + + GF ++ + T+LV+MY G + ++ ++F
Sbjct: 93 NDVTMVSVLGACAHLGDLVRGRKMHRYLEEHGFPLNIRLATSLVDMYAKCGAIVEALEVF 152
Query: 133 DEMPERN--LVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEA 190
+P N ++ WN +I GL G S E+
Sbjct: 153 QAVPVENTDVLIWNAVIGGLAVHG-------------------------------MSRES 181
Query: 191 LALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLI 250
L +F+KM P EIT L++L A G V E +G + CL+
Sbjct: 182 LQMFQKMEHAGVV-PDEITYLSLLSACVHGGLVDEAWSFFRSLEAQGLRPH-VEHYACLV 239
Query: 251 DTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPN 310
D + G + A + + + + + ++ ++++ +HG E E GR Q V L+P+
Sbjct: 240 DVLGRAGRLEEAYGVVKSMPM-KPSVSVLGALLNACHLHGW-VELGEAVGR-QLVHLQPD 296
>gi|125595888|gb|EAZ35668.1| hypothetical protein OsJ_19954 [Oryza sativa Japonica Group]
Length = 510
Score = 259 bits (661), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 133/360 (36%), Positives = 219/360 (60%), Gaps = 5/360 (1%)
Query: 97 HAVISKVGF--QSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWG 154
H+++ K+G S ++++ALV+ Y L ++ K+FDE+ R+ +N +++ K G
Sbjct: 108 HSLLIKLGHFASSDPFLSSALVSFYAKSKLLVEARKVFDELTCRDTAVYNALLSAYAKGG 167
Query: 155 ELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVL 214
++ A LFEEMP RNVVSWT ++ GY + R EA+ F +M +P+E+T+ +VL
Sbjct: 168 LVDSAEKLFEEMPDRNVVSWTAMVSGYAQNGRHEEAVETFLEMWERAGVQPNELTVSSVL 227
Query: 215 PAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERK 274
PA G ++ + + Y +G ++ V N L++ Y+KCG I A ++F+ I ++
Sbjct: 228 PACAAVGAMELGRKVEEYARGKGLLR-NVYVANALLEMYSKCGSIRQAWQVFQGIG-RQQ 285
Query: 275 NLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFF 334
+L SW S+I FA+HG+ +EA+ F +++ G+KP+ +TF+ V+ AC+HGGLV EG FF
Sbjct: 286 DLCSWNSMIMAFAVHGLWREALALFYKLRMAGVKPDGITFVGVILACTHGGLVNEGKLFF 345
Query: 335 DKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHG 394
D M E + P I+HYGC++D+LGRAG L ++ +P E D V+W LLGACSFHG
Sbjct: 346 DSMEAEFSLKPRIEHYGCMVDLLGRAGLLIESYSLIASMPVE-PDAVIWGALLGACSFHG 404
Query: 395 NVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
NVE+ E K++ +E + V++ NI A G++ ++ +++ E++ K G S +
Sbjct: 405 NVELAELAMDKLIHLEPQNTANLVILSNIYASSGKWDGVAQVWKLLKEKDHKKSAGYSFI 464
>gi|15227619|ref|NP_180537.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75100656|sp|O82380.1|PP175_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g29760, chloroplastic; Flags: Precursor
gi|3582328|gb|AAC35225.1| hypothetical protein [Arabidopsis thaliana]
gi|330253207|gb|AEC08301.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 738
Score = 258 bits (660), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 142/424 (33%), Positives = 241/424 (56%), Gaps = 18/424 (4%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQ-QIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNL 92
+N++++ + SP KA L+K+++ + SH T ++ CA + +
Sbjct: 200 WNSMINGFVQKGSPDKALELFKKMESEDVKASH---------VTMVGVLSACAKIRNLEF 250
Query: 93 GTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVK 152
G Q+ + I + ++ + A+++MY G ++D+ +LFD M E++ VTW M+ G
Sbjct: 251 GRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAI 310
Query: 153 WGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILA 212
+ E AR + MP +++V+W +I Y + + NEAL +F ++ + + ++IT+++
Sbjct: 311 SEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVS 370
Query: 213 VLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVE 272
L A Q G ++ + IH Y +K G + V + LI Y+KCG + + ++F SVE
Sbjct: 371 TLSACAQVGALELGRWIHSYIKKHGIR-MNFHVTSALIHMYSKCGDLEKSREVFN--SVE 427
Query: 273 RKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLN 332
++++ W+++I G AMHG G EAV+ F +MQ+ +KPN VTF +V ACSH GLV+E +
Sbjct: 428 KRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAES 487
Query: 333 FFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEK--TALGIPSEITDVVVWRTLLGAC 390
F +M ++P+ KHY C++D+LGR+G LE+A K A+ IP + VW LLGAC
Sbjct: 488 LFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTS---VWGALLGAC 544
Query: 391 SFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPG 450
H N+ + E ++LE+E G +VL+ NI A +G++ + LR+ M K PG
Sbjct: 545 KIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPG 604
Query: 451 CSLV 454
CS +
Sbjct: 605 CSSI 608
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 99/391 (25%), Positives = 179/391 (45%), Gaps = 73/391 (18%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+NTL+ Y A P ++ L + S S P + +T+ FLI+ A +S +LG
Sbjct: 98 WNTLIRAY--ASGPDPVLSIWAFLDMV---SESQCYP--NKYTFPFLIKAAAEVSSLSLG 150
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
LH + K S V+V +L++ Y S G L + K+F + E+++V+WN MI G V+
Sbjct: 151 QSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQK 210
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
G ++AL LF+KM + E + S +T++ V
Sbjct: 211 GS-------------------------------PDKALELFKKMES-EDVKASHVTMVGV 238
Query: 214 LPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDI---- 269
L A + +++ + + Y E+ ++ + N ++D Y KCG I A +LF+ +
Sbjct: 239 LSACAKIRNLEFGRQVCSYIEENRVNV-NLTLANAMLDMYTKCGSIEDAKRLFDAMEEKD 297
Query: 270 -------------------------SVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQ- 303
S+ +K++V+W ++IS + +G EA+ F +Q
Sbjct: 298 NVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQL 357
Query: 304 KVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRL 363
+ +K N++T +S L+AC+ G +E G + +++ + + LI M + G L
Sbjct: 358 QKNMKLNQITLVSTLSACAQVGALELG-RWIHSYIKKHGIRMNFHVTSALIHMYSKCGDL 416
Query: 364 EQAEKTALGIPSEITDVVVWRTLLGACSFHG 394
E++ + + E DV VW ++G + HG
Sbjct: 417 EKSREVFNSV--EKRDVFVWSAMIGGLAMHG 445
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 124/256 (48%), Gaps = 6/256 (2%)
Query: 147 ITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPS 206
+ L + LE+AR +F+E+P N +W +I Y ++ F MV+ P+
Sbjct: 71 MAALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPN 130
Query: 207 EITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLF 266
+ T ++ A + + Q +HG K + D+ V N LI Y CG + SA K+F
Sbjct: 131 KYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGS-DVFVANSLIHCYFSCGDLDSACKVF 189
Query: 267 EDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGL 326
+++ K++VSW S+I+GF G +A+E F +M+ +K + VT + VL+AC+
Sbjct: 190 --TTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRN 247
Query: 327 VEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTL 386
+E G +EE V ++ ++DM + G +E A++ L E D V W T+
Sbjct: 248 LEFGRQVCS-YIEENRVNVNLTLANAMLDMYTKCGSIEDAKR--LFDAMEEKDNVTWTTM 304
Query: 387 LGACSFHGNVEMGERV 402
L + + E V
Sbjct: 305 LDGYAISEDYEAAREV 320
>gi|6983870|dbj|BAA90805.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|125553873|gb|EAY99478.1| hypothetical protein OsI_21446 [Oryza sativa Indica Group]
Length = 510
Score = 258 bits (660), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 133/360 (36%), Positives = 219/360 (60%), Gaps = 5/360 (1%)
Query: 97 HAVISKVGF--QSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWG 154
H+++ K+G S ++++ALV+ Y L ++ K+FDE+ R+ +N +++ K G
Sbjct: 108 HSLLIKLGHFASSDPFLSSALVSFYAKSKLLVEARKVFDELTCRDTAVYNALLSAYAKGG 167
Query: 155 ELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVL 214
++ A LFEEMP RNVVSWT ++ GY + R EA+ F +M +P+E+T+ +VL
Sbjct: 168 LVDSAEKLFEEMPDRNVVSWTAMVSGYAQNGRHEEAVETFLEMWERAGVQPNELTVSSVL 227
Query: 215 PAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERK 274
PA G ++ + + Y +G ++ V N L++ Y+KCG I A ++F+ I ++
Sbjct: 228 PACAAVGAMELGRKVEEYARGKGLLR-NVYVANALLEMYSKCGSIRQAWQVFQGIG-RQQ 285
Query: 275 NLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFF 334
+L SW S+I FA+HG+ +EA+ F +++ G+KP+ +TF+ V+ AC+HGGLV EG FF
Sbjct: 286 DLCSWNSMIMAFAVHGLWREALALFYKLRMAGVKPDGITFVGVILACTHGGLVNEGKLFF 345
Query: 335 DKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHG 394
D M E + P I+HYGC++D+LGRAG L ++ +P E D V+W LLGACSFHG
Sbjct: 346 DSMEAEFSLKPRIEHYGCMVDLLGRAGLLIESYSLIASMPVE-PDAVIWGALLGACSFHG 404
Query: 395 NVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
NVE+ E K++ +E + V++ NI A G++ ++ +++ E++ K G S +
Sbjct: 405 NVELAELAMDKLIHLEPQNTANLVILSNIYASSGKWDGVAQVWKLLKEKDHKKSAGYSFI 464
>gi|145335647|ref|NP_172798.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|110741720|dbj|BAE98806.1| hypothetical protein [Arabidopsis thaliana]
gi|332190892|gb|AEE29013.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 474
Score = 258 bits (660), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 128/340 (37%), Positives = 207/340 (60%), Gaps = 3/340 (0%)
Query: 115 LVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSW 174
+++ Y+ +G + ++ LFD+MP R++++WN ++ G G++E +F++MP RNV SW
Sbjct: 96 MISGYIEMGNMLEARSLFDQMPCRDVMSWNTVLEGYANIGDMEACERVFDDMPERNVFSW 155
Query: 175 TGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGE 234
G+I GY + R +E L F++MV P++ T+ VL A + G + +H YGE
Sbjct: 156 NGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKWVHKYGE 215
Query: 235 KRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKE 294
G+ D+ V N LID Y KCG I A ++F+ I +R++L+SW ++I+G A HG G E
Sbjct: 216 TLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGI--KRRDLISWNTMINGLAAHGHGTE 273
Query: 295 AVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLI 354
A+ F M+ G+ P++VTF+ VL AC H GLVE+GL +F+ M + ++P+I+H GC++
Sbjct: 274 ALNLFHEMKNSGISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFTDFSIMPEIEHCGCVV 333
Query: 355 DMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYG 414
D+L RAG L QA + +P + D V+W TLLGA + V++GE +++++E
Sbjct: 334 DLLSRAGFLTQAVEFINKMPVK-ADAVIWATLLGASKVYKKVDIGEVALEELIKLEPRNP 392
Query: 415 GDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
++V++ NI GRF DA RL+ M + K G S +
Sbjct: 393 ANFVMLSNIYGDAGRFDDAARLKVAMRDTGFKKEAGVSWI 432
>gi|356550382|ref|XP_003543566.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Glycine max]
Length = 572
Score = 258 bits (660), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 152/437 (34%), Positives = 235/437 (53%), Gaps = 47/437 (10%)
Query: 21 LLTTNSLLHHSQLFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFL 80
LL+TN L+ S +NTLL +S P F + P PP D+FT+ FL
Sbjct: 51 LLSTNPTLN-SYYYNTLLRAFSQTPLPTPPFHALSLFLSM------PSPP--DNFTFPFL 101
Query: 81 IRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNL 140
++ C+ P LG QLHA+++K+GF +Y+ L++MY
Sbjct: 102 LKCCSRSKLPPLGKQLHALLTKLGFAPDLYIQNVLLHMYS-------------------- 141
Query: 141 VTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVAC 200
++G+L ARSLF+ MP R+VVSWT +I G + EA+ LF +M+ C
Sbjct: 142 -----------EFGDLLLARSLFDRMPHRDVVSWTSMIGGLVNHDLPVEAINLFERMLQC 190
Query: 201 EYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFD-IRVLNCLIDTYAKCGCI 259
E +E T+++VL A +G + + +H E+ G V L+D YAK GCI
Sbjct: 191 G-VEVNEATVISVLRACADSGALSMGRKVHANLEEWGIEIHSKSNVSTALVDMYAKGGCI 249
Query: 260 FSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLN 319
SA K+F+D V +++ WT++ISG A HG+ K+A++ F M+ G+KP+ T +VL
Sbjct: 250 ASARKVFDD--VVHRDVFVWTAMISGLASHGLCKDAIDMFVDMESSGVKPDERTVTAVLT 307
Query: 320 ACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITD 379
AC + GL+ EG F + + P I+H+GCL+D+L RAGRL++AE +P E D
Sbjct: 308 ACRNAGLIREGFMLFSDVQRRYGMKPSIQHFGCLVDLLARAGRLKEAEDFVNAMPIE-PD 366
Query: 380 VVVWRTLLGACSFHGNVEMGERVTR--KILEMERGYGGDYVLMYNILAGVGRFGDAERLR 437
V+WRTL+ AC HG+ + ER+ + +I +M G Y+L N+ A G++ + +R
Sbjct: 367 TVLWRTLIWACKVHGDADRAERLMKHLEIQDMRADDSGSYILASNVYASTGKWCNKAEVR 426
Query: 438 RVMDERNAFKVPGCSLV 454
+M+++ K PG S +
Sbjct: 427 ELMNKKGLVKPPGTSRI 443
>gi|357151860|ref|XP_003575929.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g14820-like, partial [Brachypodium
distachyon]
Length = 498
Score = 258 bits (659), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 138/380 (36%), Positives = 220/380 (57%), Gaps = 5/380 (1%)
Query: 73 DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLF 132
D + ++ TC H G +H+ I +++AL+NMY S ++ + K++
Sbjct: 93 DQVILATVLSTCGHTRHLRSGKTIHSYIQVSDIFVDARLSSALINMYASCMDMEMADKIY 152
Query: 133 DEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALA 192
M ++LV+ M+ G K G++E ARS+F M ++VVSW+ +I Y N+ +E L
Sbjct: 153 SGMQRKDLVSSTAMVCGYAKNGKIEIARSIFNHMAEKDVVSWSAMISAYAENNQPSEVLN 212
Query: 193 LFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDT 252
LF KM C + P EIT+L+V+ A G + + IH GF + + N LID
Sbjct: 213 LFNKMQGCGVS-PDEITMLSVISACANIGSLDKARWIHSIVGNHGFYKI-LSICNALIDM 270
Query: 253 YAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRV 312
++KCG + A +F ++ RKN+++WTS+I+ FAMHG G A+ FG+M+ G++PN V
Sbjct: 271 FSKCGSLTLALNMFN--AMPRKNVITWTSMIAAFAMHGDGPSALTLFGQMKGEGVEPNGV 328
Query: 313 TFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALG 372
TFL +L AC H GLV EG + F+ M++E + P +HYGC++D++GRA +++A
Sbjct: 329 TFLVLLYACCHAGLVYEGRSLFECMLQEYRIEPKHEHYGCMVDLMGRAKLMQEAVDLIES 388
Query: 373 IPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGD 432
+ +V +W +LL AC HG++E+GE +KILE++ + G YVL+ NI A G + +
Sbjct: 389 MHIR-PNVAIWGSLLAACWMHGDIELGEFAAKKILELDPNHDGAYVLLSNIHAKSGNWNN 447
Query: 433 AERLRRVMDERNAFKVPGCS 452
A++LR +M K G S
Sbjct: 448 AQKLRVMMKVHGVSKETGYS 467
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 82/313 (26%), Positives = 141/313 (45%), Gaps = 35/313 (11%)
Query: 97 HAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGEL 156
H + +VG +V TALV Y + + ++ ++FD MPER+LV W VM+
Sbjct: 16 HGIAVRVGADEDGFVGTALVGAYAACQRVAEARRVFDGMPERDLVAWGVMLDSYFNTQNY 75
Query: 157 EFARSLFEEMPCRNVVSWTGIID------GYTRMNRSNEALALFRKMVACEYTEPSEITI 210
L +M VV I+ G+TR RS + + Y + S+I +
Sbjct: 76 RETLLLLNKMKRSRVVPDQVILATVLSTCGHTRHLRSGKTIH--------SYIQVSDIFV 127
Query: 211 LAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDIS 270
A L + N + G D+ ++ YAK G I A +F ++
Sbjct: 128 DARLSSALINMYASCMDMEMADKIYSGMQRKDLVSSTAMVCGYAKNGKIEIARSIFNHMA 187
Query: 271 VERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEE- 329
K++VSW+++IS +A + E + F +MQ G+ P+ +T LSV++AC++ G +++
Sbjct: 188 --EKDVVSWSAMISAYAENNQPSEVLNLFNKMQGCGVSPDEITMLSVISACANIGSLDKA 245
Query: 330 -------GLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVV 382
G + F K++ C LIDM + G L A +P + +V+
Sbjct: 246 RWIHSIVGNHGFYKILSICNA---------LIDMFSKCGSLTLALNMFNAMPRK--NVIT 294
Query: 383 WRTLLGACSFHGN 395
W +++ A + HG+
Sbjct: 295 WTSMIAAFAMHGD 307
>gi|356574121|ref|XP_003555200.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08305-like [Glycine max]
Length = 548
Score = 258 bits (659), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 140/421 (33%), Positives = 244/421 (57%), Gaps = 12/421 (2%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+NT++ YS +++P ++ ++ ++ ++ + P D TY FL++ A L + G
Sbjct: 82 WNTIIRGYSNSKNPIQSLSIFLKMLRL------GVAP--DYLTYPFLVKASARLLNQETG 133
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
+HA I K G +S ++ +L++MY + G + K+FD + ++N+V+WN M+ G K
Sbjct: 134 VSVHAHIIKTGHESDRFIQNSLIHMYAACGNSMWAQKVFDSIQQKNVVSWNSMLDGYAKC 193
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
GE+ A+ FE M ++V SW+ +IDGY + +EA+A+F KM + + +E+T+++V
Sbjct: 194 GEMVMAQKAFESMSEKDVRSWSSLIDGYVKAGEYSEAMAIFEKMQSAG-PKANEVTMVSV 252
Query: 214 LPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVER 273
A G ++ ++I+ Y G + + L+D YAKCG I A +F +S +
Sbjct: 253 SCACAHMGALEKGRMIYKYIVDNGL-PLTLVLQTSLVDMYAKCGAIEEALLIFRRVSKSQ 311
Query: 274 KNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNF 333
+++ W ++I G A HG+ +E+++ F MQ VG+ P+ VT+L +L AC+HGGLV+E F
Sbjct: 312 TDVLIWNAVIGGLATHGLVEESLKLFKEMQIVGICPDEVTYLCLLAACAHGGLVKEAWFF 371
Query: 334 FDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFH 393
F+ + +C + P +HY C++D+L RAG+L A + +P+E T ++ LL C H
Sbjct: 372 FESL-SKCGMTPTSEHYACMVDVLARAGQLTTAYQFICQMPTEPTASML-GALLSGCINH 429
Query: 394 GNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSL 453
N+ + E V RK++E+E + G Y+ + N+ A R+ DA +R M+ R K PG S
Sbjct: 430 RNLALAEIVGRKLIELEPNHDGRYIGLSNMYAVDKRWDDARSMREAMERRGVKKSPGFSF 489
Query: 454 V 454
V
Sbjct: 490 V 490
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/279 (29%), Positives = 135/279 (48%), Gaps = 32/279 (11%)
Query: 148 TGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKM----VACEY- 202
+ L G++ ++ +F ++ + SW II GY+ ++L++F KM VA +Y
Sbjct: 56 SALSNSGDINYSYRVFSQLSSPTIFSWNTIIRGYSNSKNPIQSLSIFLKMLRLGVAPDYL 115
Query: 203 TEP----------SEITILAVLPAIWQNGDVKS----CQLIHGYG-------EKRGFTAF 241
T P ++ T ++V I + G LIH Y ++ F +
Sbjct: 116 TYPFLVKASARLLNQETGVSVHAHIIKTGHESDRFIQNSLIHMYAACGNSMWAQKVFDSI 175
Query: 242 ---DIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVEN 298
++ N ++D YAKCG + A K FE +S K++ SW+S+I G+ G EA+
Sbjct: 176 QQKNVVSWNSMLDGYAKCGEMVMAQKAFESMS--EKDVRSWSSLIDGYVKAGEYSEAMAI 233
Query: 299 FGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLG 358
F +MQ G K N VT +SV AC+H G +E+G + +V+ L + L+DM
Sbjct: 234 FEKMQSAGPKANEVTMVSVSCACAHMGALEKGRMIYKYIVDNGLPLTLVLQTS-LVDMYA 292
Query: 359 RAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVE 397
+ G +E+A + TDV++W ++G + HG VE
Sbjct: 293 KCGAIEEALLIFRRVSKSQTDVLIWNAVIGGLATHGLVE 331
>gi|356519383|ref|XP_003528352.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like [Glycine max]
Length = 614
Score = 258 bits (659), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 138/376 (36%), Positives = 219/376 (58%), Gaps = 7/376 (1%)
Query: 81 IRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNL 140
+ CA L + LG ++H I+ + AL++MY G + + ++FD M +N+
Sbjct: 217 LSACAVLRNLELGKEIHDYIAS-ELDLTTIMGNALLDMYCKCGHVSVAREIFDAMTVKNV 275
Query: 141 VTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVAC 200
W M+TG V G+L+ AR+LFE P R++V WT +I+GY + NR E +ALF +M
Sbjct: 276 NCWTSMVTGYVICGQLDQARNLFERSPSRDIVLWTAMINGYVQFNRFEETIALFGEM-QI 334
Query: 201 EYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIF 260
+P + ++ +L Q+G ++ + IH Y ++ D V LI+ YAKCGCI
Sbjct: 335 RGVKPDKFIVVTLLTGCAQSGALEQGKWIHNYIDENRIKV-DAVVGTALIEMYAKCGCIE 393
Query: 261 SASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNA 320
+ ++F ++ K+ SWTSII G AM+G EA+E F MQ GLKP+ +TF++VL+A
Sbjct: 394 KSFEIFN--GLKEKDTTSWTSIICGLAMNGKPSEALELFKAMQTCGLKPDDITFVAVLSA 451
Query: 321 CSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDV 380
CSH GLVEEG F M + P+++HYGC ID+LGRAG L++AE+ +P++ ++
Sbjct: 452 CSHAGLVEEGRKLFHSMSSMYHIEPNLEHYGCFIDLLGRAGLLQEAEELVKKLPAQNNEI 511
Query: 381 VV--WRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRR 438
+V + LL AC +GN++MGER+ + +++ + L+ +I A R+ D ++R
Sbjct: 512 IVPLYGALLSACRTYGNIDMGERLATALAKVKSSDSSLHTLLASIYASADRWEDVRKVRN 571
Query: 439 VMDERNAFKVPGCSLV 454
M + KVPG S +
Sbjct: 572 KMKDLGIKKVPGYSAI 587
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 91/401 (22%), Positives = 185/401 (46%), Gaps = 79/401 (19%)
Query: 28 LHHSQLF--NTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCA 85
+H LF N ++ + + S + A L++QL++ H P D++TY ++++
Sbjct: 68 IHDPSLFIYNLMIKAFVKSGSFRSAISLFQQLRE-----HGVWP---DNYTYPYVLKGIG 119
Query: 86 TLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNV 145
+ G ++HA + K G + YV + ++MY LG ++ +++F+EMP+R+ V+WN+
Sbjct: 120 CIGEVREGEKVHAFVVKTGLEFDPYVCNSFMDMYAELGLVEGFTQVFEEMPDRDAVSWNI 179
Query: 146 MITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEP 205
MI+ GY R R EA+ ++R+M +P
Sbjct: 180 MIS-------------------------------GYVRCKRFEEAVDVYRRMWTESNEKP 208
Query: 206 SEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVL--NCLIDTYAKCGCIFSAS 263
+E T+++ L A +++ + IH Y + D+ + N L+D Y KCG + A
Sbjct: 209 NEATVVSTLSACAVLRNLELGKEIHDYIA----SELDLTTIMGNALLDMYCKCGHVSVAR 264
Query: 264 KLFEDISVER-----------------------------KNLVSWTSIISGFAMHGMGKE 294
++F+ ++V+ +++V WT++I+G+ +E
Sbjct: 265 EIFDAMTVKNVNCWTSMVTGYVICGQLDQARNLFERSPSRDIVLWTAMINGYVQFNRFEE 324
Query: 295 AVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLI 354
+ FG MQ G+KP++ +++L C+ G +E+G + ++E + D LI
Sbjct: 325 TIALFGEMQIRGVKPDKFIVVTLLTGCAQSGALEQG-KWIHNYIDENRIKVDAVVGTALI 383
Query: 355 DMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGN 395
+M + G +E++ + G+ + D W +++ + +G
Sbjct: 384 EMYAKCGCIEKSFEIFNGLKEK--DTTSWTSIICGLAMNGK 422
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 89/362 (24%), Positives = 156/362 (43%), Gaps = 51/362 (14%)
Query: 76 TYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALV--NMYVSLGFLKDSSKLFD 133
TY L+++C ++S Q+ A I VG Q L+ +M SLG ++++F+
Sbjct: 10 TYISLLKSCKSMSQLK---QIQAHIFCVGLQQDRDTLNKLMAFSMDSSLGDFNYANRIFN 66
Query: 134 EMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALAL 193
+ + +L +N+MI VK G A SLF+++ V W
Sbjct: 67 YIHDPSLFIYNLMIKAFVKSGSFRSAISLFQQLREHGV--W------------------- 105
Query: 194 FRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTY 253
P T VL I G+V+ + +H + K G FD V N +D Y
Sbjct: 106 -----------PDNYTYPYVLKGIGCIGEVREGEKVHAFVVKTGLE-FDPYVCNSFMDMY 153
Query: 254 AKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRM-QKVGLKPNRV 312
A+ G + +++FE++ ++ VSW +ISG+ +EAV+ + RM + KPN
Sbjct: 154 AELGLVEGFTQVFEEMP--DRDAVSWNIMISGYVRCKRFEEAVDVYRRMWTESNEKPNEA 211
Query: 313 TFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALG 372
T +S L+AC+ +E G D + E ++ + + L+DM + G + A +
Sbjct: 212 TVVSTLSACAVLRNLELGKEIHDYIASELDLTTIMGN--ALLDMYCKCGHVSVAREIFDA 269
Query: 373 IPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGD 432
+ + +V W +++ G ++ + ER D VL ++ G +F
Sbjct: 270 MT--VKNVNCWTSMVTGYVICGQLDQARNL------FERSPSRDIVLWTAMINGYVQFNR 321
Query: 433 AE 434
E
Sbjct: 322 FE 323
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 79/205 (38%), Gaps = 32/205 (15%)
Query: 73 DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLF 132
D F L+ CA G +H I + + V TAL+ MY G ++ S ++F
Sbjct: 340 DKFIVVTLLTGCAQSGALEQGKWIHNYIDENRIKVDAVVGTALIEMYAKCGCIEKSFEIF 399
Query: 133 DEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALA 192
+ + E++ +W +I GL G + +EAL
Sbjct: 400 NGLKEKDTTSWTSIICGLAMNG-------------------------------KPSEALE 428
Query: 193 LFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDT 252
LF+ M C +P +IT +AVL A G V+ + + ++ C ID
Sbjct: 429 LFKAMQTCGL-KPDDITFVAVLSACSHAGLVEEGRKLFHSMSSMYHIEPNLEHYGCFIDL 487
Query: 253 YAKCGCIFSASKLFEDISVERKNLV 277
+ G + A +L + + + ++
Sbjct: 488 LGRAGLLQEAEELVKKLPAQNNEII 512
>gi|357501421|ref|XP_003620999.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|124365545|gb|ABN09779.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355496014|gb|AES77217.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 601
Score = 258 bits (659), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 161/504 (31%), Positives = 262/504 (51%), Gaps = 82/504 (16%)
Query: 18 HSHLLTTNSLLHHSQLF--NTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSF 75
H+ L ++ H F NT+++ + F LY Q + S S+
Sbjct: 72 HARLFFNHTPPHKCDEFLCNTIINAHFSLRQFNHGFTLYNQFSKDCFFRPS-------SY 124
Query: 76 TYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEM 135
T++ +++ C+ G Q+H V+ K F +YV T+LV+MYV G + + K+FDEM
Sbjct: 125 TFTLILKGCSVSDAKRQGFQIHGVVLKNWFCLDLYVGTSLVDMYVKFGDVGFARKVFDEM 184
Query: 136 PERNLVTW-------------------------------NVMITGLVKWGELEFARSLFE 164
R+LV+W NVMI G VK G ++ AR LF+
Sbjct: 185 SVRSLVSWTAVIVGYARCGDMVEARKLFDGMVDRDVAAFNVMIDGYVKMGRMDLARDLFD 244
Query: 165 EM-------------------------------PCRNVVSWTGIIDGYTRMNRSNEALAL 193
+M P +NV+SW +I GY + RS++AL L
Sbjct: 245 KMRVKNVISWTSMVHGYSEDGDVDEARFLFDCMPEKNVLSWNAMIRGYCQNGRSHDALKL 304
Query: 194 FRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQL---IHGYGEKRGFTAFDIRVLNCLI 250
F +M E +E+T+++VLPA+ D+ + L +HG+ ++ + V N L+
Sbjct: 305 FCEMRGNVDVEMNEVTVVSVLPAV---ADLSALDLGGWVHGFVQRNQLDG-SVHVCNALV 360
Query: 251 DTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPN 310
D YAKCG I A +FE+++ K+ SW ++I+G+ ++G KEA+E F M + G +PN
Sbjct: 361 DMYAKCGEIGKAKLVFEEMT--EKDTGSWNALINGYGVNGCAKEALEVFAMMLREGFEPN 418
Query: 311 RVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTA 370
++T SVL+AC+H GLVEEG F+ M E ++P I+HYGC+ID+LGRAGRL++AEK
Sbjct: 419 QITMTSVLSACNHCGLVEEGRRCFEAM-ERFGIVPQIEHYGCMIDLLGRAGRLDEAEKLI 477
Query: 371 LGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRF 430
+P + ++++ + L AC + +V ER+ + ++ME+ GDYV++ N+ A R+
Sbjct: 478 QAMPYDPNEIIL-TSFLFACCYFEDVSRAERILKVAVKMEKEGAGDYVMLRNLYATERRW 536
Query: 431 GDAERLRRVMDERNAFKVPGCSLV 454
D E ++ +M +R + K S++
Sbjct: 537 ADVEDVKEMMKKRGSNKEVAWSVI 560
>gi|359492783|ref|XP_002278486.2| PREDICTED: pentatricopeptide repeat-containing protein At3g21470
[Vitis vinifera]
Length = 575
Score = 258 bits (659), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 145/346 (41%), Positives = 210/346 (60%), Gaps = 10/346 (2%)
Query: 113 TALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVV 172
T +V+ Y ++ + ++F+ MP+RN W+ MI+G K G ++ ARS+F+ +P RN+V
Sbjct: 228 TVMVDGYARNAEMEAAREVFEGMPQRNFFAWSSMISGYCKKGNVKEARSIFDRIPVRNLV 287
Query: 173 SWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGY 232
+W +I GY + S EAL F KM A E EP E+TI +VL A Q G + + + IH
Sbjct: 288 NWNSLISGYAQNGFSEEALEAFGKMQA-EGFEPDEVTIASVLSACSQLGLLDAGKKIHHM 346
Query: 233 GEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMG 292
+G + VLN L+D YAKCG + +A +FE ++ +N W S+ISGFA+HG
Sbjct: 347 MNHKGIK-LNQFVLNGLVDMYAKCGDLANARLIFEGMA--HRNRACWNSMISGFAIHGQS 403
Query: 293 KEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGC 352
KEA+E FGRM+ P+ +TFLSVL+AC+HGG V GL F +M E+ + IKHYGC
Sbjct: 404 KEALEFFGRMEDSHEGPDEITFLSVLSACAHGGFVNAGLEIFSRM-EKYGLTTGIKHYGC 462
Query: 353 LIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEME-- 410
LID+LGRAGR+++A +P + D VVW LLGAC H ++EM +RV +I++++
Sbjct: 463 LIDLLGRAGRIKEAYDLIKRMPVKPND-VVWGALLGACRVHLDMEMADRVVEEIVKVDSN 521
Query: 411 --RGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
G YVL+ NI A R+ AE++R M + K GCS +
Sbjct: 522 ISSGCDSHYVLLSNIYAASDRWEKAEKMRMEMANKGFQKTSGCSSI 567
Score = 171 bits (433), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 118/364 (32%), Positives = 183/364 (50%), Gaps = 34/364 (9%)
Query: 37 LLHFYSLAESPQKAFLLYKQLQQ--IYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLGT 94
L+ Y +P++A L+Y L++ +Y +PL +++ CA+LS G
Sbjct: 66 LIRSYLSQGAPREALLVYTGLRRKGVYLLGVAPL-----------VLKACASLSIVKHGK 114
Query: 95 QLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWG 154
LHA K G V + T+LV MY G + DS K+FD MPERN VTWN MI G + G
Sbjct: 115 ALHAESIKNGVDFDVMIGTSLVCMYAKCGNVVDSRKVFDYMPERNAVTWNAMICGYLGNG 174
Query: 155 ELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSE----ITI 210
+ + A LFE+M R V+W +IDG+ R + A F + PSE +T
Sbjct: 175 DSKSAVLLFEKMSIRTAVTWIEMIDGFARSGDTETARRFFDDV-------PSELRNVVTW 227
Query: 211 LAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDIS 270
++ +N ++++ + + +R F A+ + +I Y K G + A +F+ I
Sbjct: 228 TVMVDGYARNAEMEAAREVFEGMPQRNFFAW-----SSMISGYCKKGNVKEARSIFDRIP 282
Query: 271 VERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEG 330
V +NLV+W S+ISG+A +G +EA+E FG+MQ G +P+ VT SVL+ACS GL++ G
Sbjct: 283 V--RNLVNWNSLISGYAQNGFSEEALEAFGKMQAEGFEPDEVTIASVLSACSQLGLLDAG 340
Query: 331 LNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGAC 390
M + L G L+DM + G L A G+ + W +++
Sbjct: 341 KKIHHMMNHKGIKLNQFVLNG-LVDMYAKCGDLANARLIFEGMAHR--NRACWNSMISGF 397
Query: 391 SFHG 394
+ HG
Sbjct: 398 AIHG 401
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 85/341 (24%), Positives = 134/341 (39%), Gaps = 87/341 (25%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+N+L+ Y+ ++A + ++Q P D T + ++ C+ L + G
Sbjct: 289 WNSLISGYAQNGFSEEALEAFGKMQ---AEGFEP-----DEVTIASVLSACSQLGLLDAG 340
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
++H +++ G + + +V LV+MY G L ++ +F+ M RN WN MI+G
Sbjct: 341 KKIHHMMNHKGIKLNQFVLNGLVDMYAKCGDLANARLIFEGMAHRNRACWNSMISGFAIH 400
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
G+ S EAL F +M + P EIT L+V
Sbjct: 401 GQ-------------------------------SKEALEFFGRMED-SHEGPDEITFLSV 428
Query: 214 LPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVER 273
L A G V + I EK G T I+ CLID + G I
Sbjct: 429 LSACAHGGFVNAGLEIFSRMEKYGLTT-GIKHYGCLIDLLGRAGRI-------------- 473
Query: 274 KNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNF 333
KEA + RM +KPN V + ++L AC V +
Sbjct: 474 -------------------KEAYDLIKRMP---VKPNDVVWGALLGACR----VHLDMEM 507
Query: 334 FDKMVEE-CEVLPDI-----KHYGCLIDMLGRAGRLEQAEK 368
D++VEE +V +I HY L ++ + R E+AEK
Sbjct: 508 ADRVVEEIVKVDSNISSGCDSHYVLLSNIYAASDRWEKAEK 548
>gi|359482718|ref|XP_002263673.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Vitis vinifera]
Length = 1088
Score = 258 bits (659), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 155/483 (32%), Positives = 256/483 (53%), Gaps = 52/483 (10%)
Query: 7 SQTPNNITTQIHSHLLTTN---------SLLH---------------------HSQLFNT 36
+Q +N QIH+HL+ N L+H ++ +N+
Sbjct: 491 NQRNDNQGRQIHAHLIRANITKNIIVETELVHMYSECGRLNYAKEIFNRMAERNAYSWNS 550
Query: 37 LLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLGTQL 96
++ Y Q+A L+KQ+Q + + P D F+ S ++ +C +LS G +L
Sbjct: 551 MIEGYQQNGETQEALRLFKQMQL------NGIKP--DCFSLSSMLSSCVSLSDSQKGREL 602
Query: 97 HAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGEL 156
H I + + + LV+MY G + + K++D+ +++++ NVM++ V G
Sbjct: 603 HNFIVRNTMEEEGILQVVLVDMYAKCGSMDYAWKVYDQTIKKDVILNNVMVSAFVNSGRA 662
Query: 157 EFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVAC--EYTEPSEITIL--- 211
A++LF++M RN W I+ GY E+ F +M+ EY + +TI+
Sbjct: 663 NDAKNLFDQMEQRNTALWNSILAGYANKGLKKESFNHFLEMLESDIEYDVLTMVTIVNLC 722
Query: 212 AVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISV 271
+ LPA+ ++GD +H K+GF + + L+D Y+KCG I A +F++++
Sbjct: 723 SSLPAL-EHGDQ-----LHSLIIKKGFVNCSVVLETALVDMYSKCGAITKARTVFDNMN- 775
Query: 272 ERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGL 331
KN+VSW ++ISG++ HG KEA+ + M K G+ PN VTFL++L+ACSH GLVEEGL
Sbjct: 776 -GKNIVSWNAMISGYSKHGCSKEALILYEEMPKKGMYPNEVTFLAILSACSHTGLVEEGL 834
Query: 332 NFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACS 391
F M E+ + +HY C++D+LGRAGRLE A++ +P E +V W LLGAC
Sbjct: 835 RIFTSMQEDYNIEAKAEHYTCMVDLLGRAGRLEDAKEFVEKMPIE-PEVSTWGALLGACR 893
Query: 392 FHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGC 451
H +++MG +++ E++ G YV+M NI A GR+ + E +R++M + K PG
Sbjct: 894 VHKDMDMGRLAAQRLFELDPQNPGPYVIMSNIYAAAGRWKEVEDIRQMMKMKGVKKDPGV 953
Query: 452 SLV 454
S +
Sbjct: 954 SWI 956
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 109/458 (23%), Positives = 195/458 (42%), Gaps = 61/458 (13%)
Query: 26 SLLHHSQL-FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTC 84
SLL +++ +N LL Y ++A LY +Q S + P D FT++ L+ C
Sbjct: 437 SLLERNEVSYNALLAGYVQEGKAEEALELYHDMQ-----SEDGIQP--DQFTFTTLLTLC 489
Query: 85 ATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWN 144
A + N G Q+HA + + ++ V T LV+MY G L + ++F+ M ERN +WN
Sbjct: 490 ANQRNDNQGRQIHAHLIRANITKNIIVETELVHMYSECGRLNYAKEIFNRMAERNAYSWN 549
Query: 145 VMITGLVKWGELEFARSLFEEMPCRNV----VSWTGIIDGYTRMNRSNEALALFRKMVAC 200
MI G + GE + A LF++M + S + ++ ++ S + L +V
Sbjct: 550 SMIEGYQQNGETQEALRLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRN 609
Query: 201 EYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIF 260
E +L + + K + + + D+ + N ++ + G
Sbjct: 610 TMEEE------GILQVVLVDMYAKCGSMDYAWKVYDQTIKKDVILNNVMVSAFVNSGRAN 663
Query: 261 SASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNA 320
A LF+ + E++N W SI++G+A G+ KE+ +F M + ++ + +T ++++N
Sbjct: 664 DAKNLFDQM--EQRNTALWNSILAGYANKGLKKESFNHFLEMLESDIEYDVLTMVTIVNL 721
Query: 321 CSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAE------------- 367
CS +E G ++++ V + L+DM + G + +A
Sbjct: 722 CSSLPALEHGDQLHSLIIKKGFVNCSVVLETALVDMYSKCGAITKARTVFDNMNGKNIVS 781
Query: 368 --------------KTALGIPSEI------TDVVVWRTLLGACSFHGNVEMGERVTRKIL 407
K AL + E+ + V + +L ACS G VE G R+
Sbjct: 782 WNAMISGYSKHGCSKEALILYEEMPKKGMYPNEVTFLAILSACSHTGLVEEGLRI---FT 838
Query: 408 EMERGYGGD-----YVLMYNILAGVGRFGDAERLRRVM 440
M+ Y + Y M ++L GR DA+ M
Sbjct: 839 SMQEDYNIEAKAEHYTCMVDLLGRAGRLEDAKEFVEKM 876
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 113/455 (24%), Positives = 178/455 (39%), Gaps = 93/455 (20%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+NT++ Y+ + + LY +++ S D FT+ +I+ C +
Sbjct: 143 WNTMILAYARVDDYMEVLRLYGRMRGSGNFS--------DKFTFPSVIKACIAMEDMGGV 194
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
QL + + K G +++V ALV+ Y G++ D+ DE+ ++VTWN +I G VK
Sbjct: 195 RQLQSSVVKAGLNCNLFVGGALVDGYARFGWMDDAVTSLDEIEGTSVVTWNAVIAGYVK- 253
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
++SW EA +F +M+ P T +
Sbjct: 254 -----------------ILSW-------------EEAWGIFDRMLKIGVC-PDNFTFASA 282
Query: 214 LPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVER 273
L + +H GF D V N LID YAKC S K+F+++
Sbjct: 283 LRVCGALRSRDGGKQVHSKLIACGFKG-DTFVGNALIDMYAKCDDEESCLKVFDEMG--E 339
Query: 274 KNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACS----------- 322
+N V+W SIIS A G +A+ F RMQ+ G K NR S+L A +
Sbjct: 340 RNQVTWNSIISAEAQFGHFNDALVLFLRMQESGYKSNRFNLGSILMASAGLADIGKGREL 399
Query: 323 HG------------------------GLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLG 358
HG G+VEE F ++E EV Y L+
Sbjct: 400 HGHLVRNLLNSDIILGSALVDMYSKCGMVEEAHQVFRSLLERNEV-----SYNALLAGYV 454
Query: 359 RAGRLEQAEKTALGIPSEI---TDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYG- 414
+ G+ E+A + + SE D + TLL C+ N G ++ ++
Sbjct: 455 QEGKAEEALELYHDMQSEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAHLIRANITKNI 514
Query: 415 ---GDYVLMYNILAGVGRFGDAERLRRVMDERNAF 446
+ V MY + GR A+ + M ERNA+
Sbjct: 515 IVETELVHMY---SECGRLNYAKEIFNRMAERNAY 546
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 101/393 (25%), Positives = 163/393 (41%), Gaps = 70/393 (17%)
Query: 60 IYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMY 119
I+T S + PL YS LI+ C + G +H + G+ Y+ T ++ +Y
Sbjct: 61 IHTKPASDVNPL----PYSSLIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLY 116
Query: 120 VSLGFLKD---SSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTG 176
G L D + KLF+EMPERNL WN MI L +AR V +
Sbjct: 117 ARSGCLDDLCYARKLFEEMPERNLTAWNTMI--------LAYAR----------VDDYME 158
Query: 177 IIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKR 236
++ Y RM S + ++T PS I K+C + G R
Sbjct: 159 VLRLYGRMRGSGN--------FSDKFTFPSVI---------------KACIAMEDMGGVR 195
Query: 237 GFTAFDIRV-LNC-------LIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAM 288
+ ++ LNC L+D YA+ G + A ++I E ++V+W ++I+G+
Sbjct: 196 QLQSSVVKAGLNCNLFVGGALVDGYARFGWMDDAVTSLDEI--EGTSVVTWNAVIAGYVK 253
Query: 289 HGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIK 348
+EA F RM K+G+ P+ TF S L C + G K++ C D
Sbjct: 254 ILSWEEAWGIFDRMLKIGVCPDNFTFASALRVCGALRSRDGGKQVHSKLI-ACGFKGDTF 312
Query: 349 HYGCLIDMLGRAGRLEQAEKTALGIPSEI--TDVVVWRTLLGACSFHGNVEMGERVTRKI 406
LIDM + E++ L + E+ + V W +++ A + G+ + + +
Sbjct: 313 VGNALIDMYAKC----DDEESCLKVFDEMGERNQVTWNSIISAEAQFGH--FNDALVLFL 366
Query: 407 LEMERGYGGDYVLMYNIL---AGVGRFGDAERL 436
E GY + + +IL AG+ G L
Sbjct: 367 RMQESGYKSNRFNLGSILMASAGLADIGKGREL 399
>gi|9958072|gb|AAG09561.1|AC011810_20 Hypothetical protein [Arabidopsis thaliana]
Length = 421
Score = 258 bits (659), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 128/340 (37%), Positives = 207/340 (60%), Gaps = 3/340 (0%)
Query: 115 LVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSW 174
+++ Y+ +G + ++ LFD+MP R++++WN ++ G G++E +F++MP RNV SW
Sbjct: 43 MISGYIEMGNMLEARSLFDQMPCRDVMSWNTVLEGYANIGDMEACERVFDDMPERNVFSW 102
Query: 175 TGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGE 234
G+I GY + R +E L F++MV P++ T+ VL A + G + +H YGE
Sbjct: 103 NGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKWVHKYGE 162
Query: 235 KRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKE 294
G+ D+ V N LID Y KCG I A ++F+ I +R++L+SW ++I+G A HG G E
Sbjct: 163 TLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGI--KRRDLISWNTMINGLAAHGHGTE 220
Query: 295 AVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLI 354
A+ F M+ G+ P++VTF+ VL AC H GLVE+GL +F+ M + ++P+I+H GC++
Sbjct: 221 ALNLFHEMKNSGISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFTDFSIMPEIEHCGCVV 280
Query: 355 DMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYG 414
D+L RAG L QA + +P + D V+W TLLGA + V++GE +++++E
Sbjct: 281 DLLSRAGFLTQAVEFINKMPVK-ADAVIWATLLGASKVYKKVDIGEVALEELIKLEPRNP 339
Query: 415 GDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
++V++ NI GRF DA RL+ M + K G S +
Sbjct: 340 ANFVMLSNIYGDAGRFDDAARLKVAMRDTGFKKEAGVSWI 379
>gi|225432698|ref|XP_002278762.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14820
[Vitis vinifera]
gi|297737070|emb|CBI26271.3| unnamed protein product [Vitis vinifera]
Length = 727
Score = 258 bits (659), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 134/380 (35%), Positives = 218/380 (57%), Gaps = 5/380 (1%)
Query: 73 DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLF 132
D S ++ C + + G +H I + ++ +ALV MY S G + + LF
Sbjct: 222 DEMMLSTVLSACGRAGNLSYGKMIHDFIMENNIVVDPHLQSALVTMYASCGSMDLALNLF 281
Query: 133 DEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALA 192
++M +NLV M+TG K G++E ARS+F +M +++V W+ +I GY + EAL
Sbjct: 282 EKMTPKNLVASTAMVTGYSKLGQIENARSVFNQMVKKDLVCWSAMISGYAESDSPQEALN 341
Query: 193 LFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDT 252
LF +M + +P ++T+L+V+ A G + + IH + +K GF + + N LI+
Sbjct: 342 LFNEMQSLG-IKPDQVTMLSVITACAHLGALDQAKWIHLFVDKNGFGG-ALPINNALIEM 399
Query: 253 YAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRV 312
YAKCG + A ++F+ + RKN++SWT +IS FAMHG A+ F +M+ ++PN +
Sbjct: 400 YAKCGSLERARRIFDKMP--RKNVISWTCMISAFAMHGDAGSALRFFHQMEDENIEPNGI 457
Query: 313 TFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALG 372
TF+ VL ACSH GLVEEG F M+ E + P HYGC++D+ GRA L +A +
Sbjct: 458 TFVGVLYACSHAGLVEEGRKIFYSMINEHNITPKHVHYGCMVDLFGRANLLREALELVEA 517
Query: 373 IPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGD 432
+P +V++W +L+ AC HG +E+GE +++LE++ + G +V + NI A R+ D
Sbjct: 518 MPLA-PNVIIWGSLMAACRVHGEIELGEFAAKRLLELDPDHDGAHVFLSNIYAKARRWED 576
Query: 433 AERLRRVMDERNAFKVPGCS 452
++R++M + K GCS
Sbjct: 577 VGQVRKLMKHKGISKERGCS 596
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 102/395 (25%), Positives = 185/395 (46%), Gaps = 73/395 (18%)
Query: 31 SQLFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHP 90
+ L N L S +E P+K L+Y++++ T + D F++ L++ + +
Sbjct: 87 THLCNRFLRELSRSEEPEKTLLVYERMR---TQGLA-----VDRFSFPPLLKALSRVKSL 138
Query: 91 NLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGL 150
G ++H + +K+GF S +V T LV MY + G + +
Sbjct: 139 VEGLEIHGLAAKLGFDSDPFVQTGLVRMYAACGRIAE----------------------- 175
Query: 151 VKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITI 210
AR +F++M R+VV+W+ +IDGY + N+AL LF +M EP E+ +
Sbjct: 176 --------ARLMFDKMFHRDVVTWSIMIDGYCQSGLFNDALLLFEEMKNYN-VEPDEMML 226
Query: 211 LAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDIS 270
VL A + G++ ++IH + + D + + L+ YA CG + A LFE ++
Sbjct: 227 STVLSACGRAGNLSYGKMIHDFIMENNIVV-DPHLQSALVTMYASCGSMDLALNLFEKMT 285
Query: 271 VE-----------------------------RKNLVSWTSIISGFAMHGMGKEAVENFGR 301
+ +K+LV W+++ISG+A +EA+ F
Sbjct: 286 PKNLVASTAMVTGYSKLGQIENARSVFNQMVKKDLVCWSAMISGYAESDSPQEALNLFNE 345
Query: 302 MQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAG 361
MQ +G+KP++VT LSV+ AC+H G +++ + V++ + LI+M + G
Sbjct: 346 MQSLGIKPDQVTMLSVITACAHLGALDQA-KWIHLFVDKNGFGGALPINNALIEMYAKCG 404
Query: 362 RLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNV 396
LE+A + +P + +V+ W ++ A + HG+
Sbjct: 405 SLERARRIFDKMPRK--NVISWTCMISAFAMHGDA 437
>gi|297743898|emb|CBI36868.3| unnamed protein product [Vitis vinifera]
Length = 541
Score = 258 bits (659), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 151/447 (33%), Positives = 240/447 (53%), Gaps = 40/447 (8%)
Query: 10 PNNITTQIHSHLLTTNSLLHHSQLFNTLL--HFYSLAESPQKAFLLYKQLQQIYTHSHSP 67
P + + H L ++ L S L+NTL+ H + A+ ++ H P
Sbjct: 4 PTRLISSTHPTLHFSHPTLE-SFLWNTLIRAHVQARAQPTGPTHSPISIFVRMRFHGVQP 62
Query: 68 LPPLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKD 127
D T+ FL+++ A+ S +LG +HA I + G +V T+L++MY S G +
Sbjct: 63 -----DFHTFPFLLQSFASPSLLHLGRSVHAQILRFGLAIDPFVQTSLISMYSSSGLVDM 117
Query: 128 SSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRS 187
+ LF MPERN+++W+ MI G V+ G+ + A +LF EM
Sbjct: 118 ARNLFAVMPERNVISWSCMINGYVRCGQYKEALALFREM--------------------- 156
Query: 188 NEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLN 247
+M+ P+E T+ VL A + G ++ + H Y +K G D+ +
Sbjct: 157 --------QMLGVNDVRPNEFTMSGVLAACGRLGALEHGKWAHAYIDKCGMPV-DVVLGT 207
Query: 248 CLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGL 307
LID YAKCG + A+ +F ++ K++++W+++ISG AMHG+ +E V F +M G+
Sbjct: 208 ALIDMYAKCGSVEKATWVFSNLG-PNKDVMAWSAMISGLAMHGLAEECVGLFSKMINQGV 266
Query: 308 KPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAE 367
+PN VTFL+V AC HGGLV EG ++ +M E+ ++P I+HYGC++D+ GRAGR+++A
Sbjct: 267 RPNAVTFLAVFCACVHGGLVSEGKDYLRRMTEDYSIIPTIQHYGCMVDLYGRAGRIKEAW 326
Query: 368 KTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGV 427
+P E DV+VW LL HG++E E +K++E+E G YVL+ N+ A
Sbjct: 327 NVVKSMPME-PDVLVWGALLSGSRMHGDIETCELALKKLIELEPTNSGAYVLLSNVYAKR 385
Query: 428 GRFGDAERLRRVMDERNAFKVPGCSLV 454
GR+ D +R +M+ KVPGCSL+
Sbjct: 386 GRWEDVRHVRDLMETMGIKKVPGCSLI 412
>gi|326522825|dbj|BAJ88458.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 551
Score = 258 bits (658), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 150/422 (35%), Positives = 230/422 (54%), Gaps = 45/422 (10%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+NTLL Y A S A + L ++ +P D++T+ L++ CA G
Sbjct: 90 YNTLLRGY--ARSSDGAAEAARVLARMLEEGVAP-----DTYTFVSLLKACAAARAGEEG 142
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERN-LVTWNVMITGLVK 152
Q H V K G H YV L+NMY G + + +F +P + +V++N MIT V
Sbjct: 143 RQAHGVAVKTGAADHEYVLPTLINMYAECGDARSARAMFGRVPNGDCVVSYNAMITAAV- 201
Query: 153 WGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILA 212
R +R EAL LFR+M A + +P+ +T+ +
Sbjct: 202 ------------------------------RSSRPGEALVLFREMQA-KGLKPTSVTVTS 230
Query: 213 VLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVE 272
VL A G ++ + IH Y K G + ++V LID Y KCG + A +F+ +E
Sbjct: 231 VLSACALLGALELGRWIHEYVRKAGLDSL-VKVNTALIDMYGKCGSLEDAIDVFQ--GME 287
Query: 273 RKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLN 332
++ +W+ +I +A H G+EA+ F M+K G++P+ VTFL VL ACSH G+V EGL
Sbjct: 288 SRDRQAWSVMIVAYANHSYGREAISLFEEMKKQGIRPDAVTFLGVLYACSHSGMVSEGLQ 347
Query: 333 FFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSF 392
+FD M E ++P IKHYGC+ D+L R+G+LE+A K +P + T ++WRTLL AC
Sbjct: 348 YFDSM-REYGIVPGIKHYGCVTDLLARSGQLEKAYKFIDELPIQPT-AILWRTLLSACGS 405
Query: 393 HGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCS 452
HG V++G+RV +ILE++ +G DYV+ N+ A G++ + R+R++M+E+ KVPGCS
Sbjct: 406 HGAVDLGKRVFERILELDDTHGSDYVIFSNLCANTGKWEEMNRVRKLMNEKGVVKVPGCS 465
Query: 453 LV 454
+
Sbjct: 466 SI 467
>gi|449469438|ref|XP_004152427.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 528
Score = 258 bits (658), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 152/427 (35%), Positives = 243/427 (56%), Gaps = 19/427 (4%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSH--P 90
++N+++ Y L+ P++A L Y L L + +T+ LI+ CA +
Sbjct: 77 MYNSMIRGYFLSRFPKQAILCYLDLMD--------RGFLANKYTFPPLIKACALVYRELK 128
Query: 91 NLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGL 150
+G +HA + +G+++ +V +ALV Y SL LK + LFD+ +++V W VM+ G
Sbjct: 129 RIGYLVHAHVIVLGYENDAFVVSALVEFY-SLFDLKVARVLFDKSSGKDVVVWTVMVDGY 187
Query: 151 VKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITI 210
K G++E AR LF+EMP RNV+SW+ ++ Y+R++ E L LFR+M + P++ I
Sbjct: 188 GKVGDIESARVLFDEMPERNVISWSAMMAAYSRVSDFREVLCLFRQMQK-KNIVPNDSVI 246
Query: 211 LAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDIS 270
+VL A G + +H Y ++ G + I + L+D Y+KCG I SA ++FE IS
Sbjct: 247 ASVLTACAHLGAITQGLWMHSYAKRYGLDSNPI-LATALVDMYSKCGYIESALEVFEGIS 305
Query: 271 VERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEG 330
K+ +W ++ISGFAM G +++E F +M G + TF+S+L AC+H +VE G
Sbjct: 306 --NKDAGAWNAMISGFAMTGNVVKSLELFDKMIASGTQATEATFVSILAACTHAKMVERG 363
Query: 331 LNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEK---TALGIPSEITDVVVWRTLL 387
L FFD+M V P +HY C++D++ RAG +E AEK +G S + D VW +L
Sbjct: 364 LEFFDQMYPVYRVQPQFEHYACVVDLMARAGMVEDAEKFVEEKMGGFSNV-DANVWGAIL 422
Query: 388 GACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFK 447
AC + N+E+G+R+ K+ + GG VL YNI + GR A+ +R+ E + K
Sbjct: 423 SACRQYRNIEIGDRIWTKLSALGLLDGGTQVLSYNIFSEAGREMAAKEVRKKFSEARSKK 482
Query: 448 VPGCSLV 454
+PGCS++
Sbjct: 483 IPGCSVI 489
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 81/358 (22%), Positives = 138/358 (38%), Gaps = 82/358 (22%)
Query: 78 SFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPE 137
S L+R C ++ H Q+HA + K Y L+ + + G +DS
Sbjct: 11 SPLLRKCKSVQHLK---QIHAHLLKTYLSQSPYAIAPLLEVAATSGCDRDSF-------- 59
Query: 138 RNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALF--- 194
+A +F+ + RN+ + +I GY +A+ +
Sbjct: 60 ------------------FSYACGIFKNLQQRNIFMYNSMIRGYFLSRFPKQAILCYLDL 101
Query: 195 --RKMVACEYTEPSEITILA----------------VLPAIWQNGDVKSCQLIHGYG--- 233
R +A +YT P I A V+ ++N L+ Y
Sbjct: 102 MDRGFLANKYTFPPLIKACALVYRELKRIGYLVHAHVIVLGYENDAFVVSALVEFYSLFD 161
Query: 234 EKRGFTAF------DIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFA 287
K F D+ V ++D Y K G I SA LF+++ +N++SW+++++ ++
Sbjct: 162 LKVARVLFDKSSGKDVVVWTVMVDGYGKVGDIESARVLFDEMP--ERNVISWSAMMAAYS 219
Query: 288 MHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDI 347
+E + F +MQK + PN SVL AC+H G + +GL
Sbjct: 220 RVSDFREVLCLFRQMQKKNIVPNDSVIASVLTACAHLGAITQGLWMHSYA---------- 269
Query: 348 KHYG---------CLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNV 396
K YG L+DM + G +E A + GI ++ D W ++ + GNV
Sbjct: 270 KRYGLDSNPILATALVDMYSKCGYIESALEVFEGISNK--DAGAWNAMISGFAMTGNV 325
>gi|298205062|emb|CBI38358.3| unnamed protein product [Vitis vinifera]
Length = 549
Score = 258 bits (658), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 162/462 (35%), Positives = 252/462 (54%), Gaps = 57/462 (12%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNL 92
++N+L+ YS ++ P A LL++++ S L P + FT F+++ C S
Sbjct: 55 MYNSLIRGYSNSDDPIDAVLLFRRM------ICSGLSP--NEFTLPFVLKACGCKSAYWE 106
Query: 93 GTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMP---------------- 136
+H + K+G S V+V AL+ +YV G + + KLFD++
Sbjct: 107 AVLVHGLAIKLGIGSLVFVQNALIAVYVVCGLIHCARKLFDDITDKTLIDIIVRNALVDM 166
Query: 137 ------------------ERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGII 178
E+N+V+W MI+ + G +E AR +F++MP +NVVSW +I
Sbjct: 167 YAKCGNLHSAQAIFDRTQEKNVVSWTSMISAYAQHGSIEVARQIFDQMPGKNVVSWNSMI 226
Query: 179 DGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYG-EKRG 237
Y R + EAL LF KM P E T++++L A Q GD+ + IH Y +G
Sbjct: 227 SCYLREGQYREALDLFNKMRNSRVV-PDEATLVSILAACSQLGDLVMGKKIHNYILSNKG 285
Query: 238 FTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVE 297
A+ + + N LID YAKCG + +A +F + + KNLVSW II A+HG G EA++
Sbjct: 286 --AYGVTLYNSLIDMYAKCGPVVTALDIF--LEMPGKNLVSWNVIIGALALHGCGLEAIK 341
Query: 298 NFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDML 357
F MQ G P+ +T +L+ACSH GLV+ GL +FD+M V +I+HY C++D+L
Sbjct: 342 LFEEMQADGTLPDEITLTGLLSACSHSGLVDMGLYYFDRMGVIYRVPREIEHYACMVDLL 401
Query: 358 GRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDY 417
GR G L +A + +P + DVVVW LLGAC HGNVE+G+++ +++LE+E GG Y
Sbjct: 402 GRGGLLGEAIELIGRMPMK-PDVVVWGALLGACRIHGNVEIGKQILKQLLELEPHSGGLY 460
Query: 418 VLMYNILAGVGRFGDAERLRRVMDER--------NAFKVPGC 451
VL+ NI R+ D +++R++M +R ++ ++ GC
Sbjct: 461 VLISNIYWEAQRWEDVKKIRKLMIDRGIKKGRAISSIEIDGC 502
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/305 (26%), Positives = 132/305 (43%), Gaps = 70/305 (22%)
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
G+L++A+ +F+++P N + +I GY+ + +A+ LFR+M+ C P+E T+ V
Sbjct: 36 GDLQYAQRMFDQIPQPNKFMYNSLIRGYSNSDDPIDAVLLFRRMI-CSGLSPNEFTLPFV 94
Query: 214 LPAIWQNGDVKSCQLIHGYGEKRGF---------------------------------TA 240
L A L+HG K G T
Sbjct: 95 LKACGCKSAYWEAVLVHGLAIKLGIGSLVFVQNALIAVYVVCGLIHCARKLFDDITDKTL 154
Query: 241 FDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMH----------- 289
DI V N L+D YAKCG + SA +F+ + KN+VSWTS+IS +A H
Sbjct: 155 IDIIVRNALVDMYAKCGNLHSAQAIFD--RTQEKNVVSWTSMISAYAQHGSIEVARQIFD 212
Query: 290 --------------------GMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEE 329
G +EA++ F +M+ + P+ T +S+L ACS G +
Sbjct: 213 QMPGKNVVSWNSMISCYLREGQYREALDLFNKMRNSRVVPDEATLVSILAACSQLGDLVM 272
Query: 330 GLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGA 389
G + ++ + + Y LIDM + G + A L +P + ++V W ++GA
Sbjct: 273 GKKIHNYILSN-KGAYGVTLYNSLIDMYAKCGPVVTALDIFLEMPGK--NLVSWNVIIGA 329
Query: 390 CSFHG 394
+ HG
Sbjct: 330 LALHG 334
>gi|297741566|emb|CBI32698.3| unnamed protein product [Vitis vinifera]
Length = 493
Score = 258 bits (658), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 151/416 (36%), Positives = 223/416 (53%), Gaps = 39/416 (9%)
Query: 73 DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLF 132
D FT+ +I+ C++L LG QLHA + K F +H+ AL++MY + D+ +F
Sbjct: 40 DQFTFGSIIKACSSLGDIGLGRQLHAHVLKSEFGAHIIAQNALISMYTKSNLIIDALDVF 99
Query: 133 DEMPERNLVTWNVMITG------------------------LVKW---------GELEFA 159
M R+L++W MI G LV W GEL A
Sbjct: 100 SRMATRDLISWGSMIAGFSQLGYELEALCYFKEMLHQGRPDLVAWNAIIAGFAYGELRDA 159
Query: 160 RSLFEEMPCR-NVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIW 218
FEEM C ++VSW I+ R +++ E L + M ++ P IT+ VL A
Sbjct: 160 IFFFEEMRCNADLVSWNAILTACMRHDQAEEVFRLLKLMCISQH-RPDYITLTNVLGASA 218
Query: 219 QNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVS 278
+ ++ +H Y K G D V N LID YAKCG + +A K+F+ S+ ++VS
Sbjct: 219 ETVSIEIGNQVHCYALKTGLNC-DTSVTNGLIDLYAKCGSLKTAHKIFD--SMINPDVVS 275
Query: 279 WTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMV 338
W+S+I G+A G G+EA++ F M+++ +KPN VTF+ VL ACSH GLVEEG + M
Sbjct: 276 WSSLILGYAQFGYGEEALKLFKTMRRLDVKPNHVTFVGVLTACSHVGLVEEGWKLYGTME 335
Query: 339 EECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEM 398
+E + P +H C++D+L RAG L +AE + + D+VVW+TLL AC HGNV++
Sbjct: 336 KEFGIAPTREHCSCMVDLLARAGCLNEAEGFIHQMAFD-PDIVVWKTLLAACKTHGNVDV 394
Query: 399 GERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
G+R IL+++ +VL+ NI A G + D RLR +M +R KVPG S +
Sbjct: 395 GKRAAENILKIDPSNSAAHVLLCNIYASKGNWEDVARLRSLMKQRGVRKVPGQSWI 450
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 117/239 (48%), Gaps = 12/239 (5%)
Query: 166 MPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKS 225
MP RNVVSWT +I GY++ + AL + +M+ P + T +++ A GD+
Sbjct: 1 MPERNVVSWTSVIAGYSQNGQGGNALEFYFQMLQSGVM-PDQFTFGSIIKACSSLGDIGL 59
Query: 226 CQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISG 285
+ +H + K F A I N LI Y K I A +F ++ ++L+SW S+I+G
Sbjct: 60 GRQLHAHVLKSEFGA-HIIAQNALISMYTKSNLIIDALDVFSRMAT--RDLISWGSMIAG 116
Query: 286 FAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLP 345
F+ G EA+ F M G +P+ V + +++ ++G L + + FF++M C
Sbjct: 117 FSQLGYELEALCYFKEMLHQG-RPDLVAWNAIIAGFAYGEL-RDAIFFFEEM--RCNA-- 170
Query: 346 DIKHYGCLIDMLGRAGRLEQAEK--TALGIPSEITDVVVWRTLLGACSFHGNVEMGERV 402
D+ + ++ R + E+ + + I D + +LGA + ++E+G +V
Sbjct: 171 DLVSWNAILTACMRHDQAEEVFRLLKLMCISQHRPDYITLTNVLGASAETVSIEIGNQV 229
>gi|449517761|ref|XP_004165913.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g06145-like [Cucumis sativus]
Length = 600
Score = 257 bits (657), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 144/427 (33%), Positives = 227/427 (53%), Gaps = 35/427 (8%)
Query: 59 QIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNM 118
Q Y H L S+T+S L++ C + LG +H I K GF+SH++V TALV+
Sbjct: 123 QCYVHMLEESNVLPTSYTFSSLVKACTFMCAVELGQMVHCHIWKKGFESHLFVQTALVDF 182
Query: 119 YVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGII 178
Y L L ++ K+FDEM ER+ W M++ L + G+++ AR LFEEMP RN +W +I
Sbjct: 183 YSKLEILSEARKVFDEMCERDAFAWTAMLSALARVGDMDSARKLFEEMPERNTATWNTMI 242
Query: 179 DGYTRMNRSNEALALFRK-----------MVACE------------YTE-------PSEI 208
DGYTR+ A LF + M+ C Y+E P E+
Sbjct: 243 DGYTRLGNVESAELLFNQMPTKDIISWTTMITCYSQNKQYQDALAIYSEMRLNGIIPDEV 302
Query: 209 TILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFED 268
T+ V A G ++ + IH Y +G D+ + + L+D YAKCG + + +F
Sbjct: 303 TMSTVASACAHIGALELGKEIHHYVMSQGLN-LDVYIGSALVDMYAKCGSLDLSLLIF-- 359
Query: 269 ISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVE 328
+ KNL W ++I G A+HG ++A+ F M++ + PN VTF+S+L+AC+H GLV+
Sbjct: 360 FKLTDKNLYCWNAVIEGLAVHGYAEKALRMFAIMEREKIMPNGVTFISILSACTHAGLVD 419
Query: 329 EGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLG 388
EG + F M + ++ PDI+HYGC++DML ++G L +A + + E + ++W LL
Sbjct: 420 EGRSRFLSMTRDYDIRPDIRHYGCMVDMLSKSGYLNEALELIKSMEFE-PNSIIWGALLN 478
Query: 389 ACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNA-FK 447
C HGN E+ E +++ +E G Y L+ ++ A + + +R +M E+ K
Sbjct: 479 GCKLHGNCEIAEDAVEQLMILEPMNSGHYNLLVSMYAEEKDWMEVAHIRSMMKEKGVEKK 538
Query: 448 VPGCSLV 454
PG S +
Sbjct: 539 YPGSSWI 545
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 80/354 (22%), Positives = 150/354 (42%), Gaps = 67/354 (18%)
Query: 67 PL-PPLFDSFTYSFL--IRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLG 123
PL PP SF + L I+ C+T++ +LH + + + +++ + LV+ ++S
Sbjct: 29 PLQPPSRPSFKQTLLNRIKNCSTIN------ELHGLCASM-IKTNAIQDCFLVHQFISAS 81
Query: 124 FLKDSSKL----FDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIID 179
F +S F +M N+ +N MI G V G P R
Sbjct: 82 FALNSVHYPVFAFTQMENPNVFVYNAMIKGFVYCG-----------YPFR---------- 120
Query: 180 GYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFT 239
AL + M+ P+ T +++ A V+ Q++H + K+GF
Sbjct: 121 ----------ALQCYVHMLEESNVLPTSYTFSSLVKACTFMCAVELGQMVHCHIWKKGFE 170
Query: 240 AFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENF 299
+ + V L+D Y+K + A K+F+++ ++ +WT+++S A G A + F
Sbjct: 171 S-HLFVQTALVDFYSKLEILSEARKVFDEMC--ERDAFAWTAMLSALARVGDMDSARKLF 227
Query: 300 GRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGR 359
M + N T+ ++++ + G VE F++M + DI + +I +
Sbjct: 228 EEMP----ERNTATWNTMIDGYTRLGNVESAELLFNQMPTK-----DIISWTTMITCYSQ 278
Query: 360 AGRLEQAEKTALGIPSE------ITDVVVWRTLLGACSFHGNVEMGERVTRKIL 407
+ + AL I SE I D V T+ AC+ G +E+G+ + ++
Sbjct: 279 NKQYQD----ALAIYSEMRLNGIIPDEVTMSTVASACAHIGALELGKEIHHYVM 328
>gi|242076234|ref|XP_002448053.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
gi|241939236|gb|EES12381.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
Length = 693
Score = 257 bits (657), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 139/383 (36%), Positives = 217/383 (56%), Gaps = 36/383 (9%)
Query: 72 FDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKL 131
FD T ++ C + LG + + + G + + TAL++MY
Sbjct: 218 FDEITLVSVVTACGRIGDAKLGKWVAEYVDEKGLVRNRNLMTALIDMYA----------- 266
Query: 132 FDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEAL 191
K GEL AR LF+ M R+VV+W+ +I GYT+ ++ EAL
Sbjct: 267 --------------------KCGELGKARRLFDGMQSRDVVAWSAMISGYTQADQCREAL 306
Query: 192 ALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLID 251
ALF +M E EP+++T+++VL A G +++ + +H Y ++ + I + L+D
Sbjct: 307 ALFSEMQLAE-VEPNDVTMVSVLSACAVLGALETGKWVHSYIRRKRLS-LTIILGTALVD 364
Query: 252 TYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNR 311
YAKCGCI A + FE + V KN +WT++I G A +G G+EA+E F M+K ++P
Sbjct: 365 FYAKCGCIDDAVEAFESMPV--KNSWTWTALIKGMATNGRGREALELFSSMRKASIEPTD 422
Query: 312 VTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTAL 371
VTF+ VL ACSH LVEEG FD M ++ + P +HYGC++D+LGRAG +++A +
Sbjct: 423 VTFIGVLMACSHSCLVEEGRRHFDSMTQDYGIKPRAEHYGCVVDLLGRAGLIDEAYQFIR 482
Query: 372 GIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFG 431
+P E + V+WR LL +C+ H NVE+GE ++I+ + + GDY+L+ NI A VG++
Sbjct: 483 TMPIE-PNAVIWRALLSSCAVHKNVEIGEEALKQIVSLNPSHSGDYILLSNIYASVGQWK 541
Query: 432 DAERLRRVMDERNAFKVPGCSLV 454
+A +R+ M +R K PGCSL+
Sbjct: 542 NAAMIRKEMKDRGIEKTPGCSLI 564
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 64/285 (22%), Positives = 114/285 (40%), Gaps = 59/285 (20%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
++ ++ Y+ A+ ++A L+ ++Q + T ++ CA L G
Sbjct: 289 WSAMISGYTQADQCREALALFSEMQLAEVEP--------NDVTMVSVLSACAVLGALETG 340
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
+H+ I + + + TALV+ Y G + D+ + F+ MP +N TW +I G+
Sbjct: 341 KWVHSYIRRKRLSLTIILGTALVDFYAKCGCIDDAVEAFESMPVKNSWTWTALIKGMATN 400
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
G R EAL LF M EP+++T + V
Sbjct: 401 G-------------------------------RGREALELFSSMRKAS-IEPTDVTFIGV 428
Query: 214 LPA-----IWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFED 268
L A + + G + YG K + C++D + G I A +
Sbjct: 429 LMACSHSCLVEEGRRHFDSMTQDYGIKPRAEHY-----GCVVDLLGRAGLIDEAYQFIRT 483
Query: 269 ISVERKNLVSWTSIISGFAMHG---MGKEAVENFGRMQKVGLKPN 310
+ +E N V W +++S A+H +G+EA++ Q V L P+
Sbjct: 484 MPIE-PNAVIWRALLSSCAVHKNVEIGEEALK-----QIVSLNPS 522
>gi|297822703|ref|XP_002879234.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297325073|gb|EFH55493.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 740
Score = 257 bits (657), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 143/424 (33%), Positives = 239/424 (56%), Gaps = 18/424 (4%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQ-QIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNL 92
+N++++ + SP KA L+K+++ + SH T ++ CA +
Sbjct: 202 WNSMINGFVQKGSPDKALELFKKMESEDVKASH---------VTMVGVLSACAKIRDLEF 252
Query: 93 GTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVK 152
G ++ + I + ++ + A+++MY G ++D+ +LFD M E++ VTW M+ G
Sbjct: 253 GRRVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAI 312
Query: 153 WGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILA 212
+ E AR + MP +++V+W +I Y + + NEAL +F ++ + + ++IT+++
Sbjct: 313 SEDYEAAREVLNAMPKKDIVAWNALISAYEQNGKPNEALLVFHELQLQKNIKLNQITLVS 372
Query: 213 VLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVE 272
L A Q G ++ + IH Y +K G + V + LI Y+KCG + A ++F SVE
Sbjct: 373 TLSACAQVGALELGRWIHSYIKKNGIK-MNFYVTSALIHMYSKCGDLEKAREVFN--SVE 429
Query: 273 RKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLN 332
++++ W+++I G AMHG G EAV+ F +MQ+ +KPN VTF +V ACSH GLV+E +
Sbjct: 430 KRDVFVWSAMIGGLAMHGCGSEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAES 489
Query: 333 FFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEK--TALGIPSEITDVVVWRTLLGAC 390
F KM ++P+ KHY C++D+LGR+G LE+A K A+ IP + VW LLGAC
Sbjct: 490 LFYKMESSYGIVPEDKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTS---VWGALLGAC 546
Query: 391 SFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPG 450
H N+ + E ++LE+E G +VL+ NI A G++ + LR+ M K PG
Sbjct: 547 KIHANLSLAEMACTRLLELEPRNDGAHVLLSNIYAKSGKWDNVSELRKHMRVTGLKKEPG 606
Query: 451 CSLV 454
CS +
Sbjct: 607 CSSI 610
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 99/391 (25%), Positives = 179/391 (45%), Gaps = 72/391 (18%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+NTL+ Y A P ++ L + + S P + +T+ FLI+ A +S +LG
Sbjct: 99 WNTLIRAY--ASGPDPVCSIWAFLDMVSSESQC-YP---NKYTFPFLIKAAAEVSSLSLG 152
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
LH + K S V+V +L++ Y S G L + K+F + E+++V+WN MI G V+
Sbjct: 153 QSLHGMAIKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQK 212
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
G ++AL LF+KM + E + S +T++ V
Sbjct: 213 GS-------------------------------PDKALELFKKMES-EDVKASHVTMVGV 240
Query: 214 LPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDI---- 269
L A + D++ + + Y E+ ++ + N ++D Y KCG I A +LF+ +
Sbjct: 241 LSACAKIRDLEFGRRVCSYIEENRVNV-NLTLANAMLDMYTKCGSIEDAKRLFDAMEEKD 299
Query: 270 -------------------------SVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQ- 303
++ +K++V+W ++IS + +G EA+ F +Q
Sbjct: 300 NVTWTTMLDGYAISEDYEAAREVLNAMPKKDIVAWNALISAYEQNGKPNEALLVFHELQL 359
Query: 304 KVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRL 363
+ +K N++T +S L+AC+ G +E G + +++ + + LI M + G L
Sbjct: 360 QKNIKLNQITLVSTLSACAQVGALELG-RWIHSYIKKNGIKMNFYVTSALIHMYSKCGDL 418
Query: 364 EQAEKTALGIPSEITDVVVWRTLLGACSFHG 394
E+A + + E DV VW ++G + HG
Sbjct: 419 EKAREVFNSV--EKRDVFVWSAMIGGLAMHG 447
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/257 (29%), Positives = 125/257 (48%), Gaps = 7/257 (2%)
Query: 147 ITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACE-YTEP 205
I L + LE+AR +F+E+P N +W +I Y ++ F MV+ E P
Sbjct: 72 IAALSSFASLEYARKVFDEIPQPNSFTWNTLIRAYASGPDPVCSIWAFLDMVSSESQCYP 131
Query: 206 SEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKL 265
++ T ++ A + + Q +HG K + D+ V N LI Y CG + SA K+
Sbjct: 132 NKYTFPFLIKAAAEVSSLSLGQSLHGMAIKSAVGS-DVFVANSLIHCYFSCGDLDSACKV 190
Query: 266 FEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGG 325
F +++ K++VSW S+I+GF G +A+E F +M+ +K + VT + VL+AC+
Sbjct: 191 F--TTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIR 248
Query: 326 LVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRT 385
+E G +EE V ++ ++DM + G +E A++ L E D V W T
Sbjct: 249 DLEFGRRVCS-YIEENRVNVNLTLANAMLDMYTKCGSIEDAKR--LFDAMEEKDNVTWTT 305
Query: 386 LLGACSFHGNVEMGERV 402
+L + + E V
Sbjct: 306 MLDGYAISEDYEAAREV 322
>gi|347954490|gb|AEP33745.1| chloroplast biogenesis 19, partial [Arabis hirsuta]
Length = 435
Score = 257 bits (656), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 143/365 (39%), Positives = 214/365 (58%), Gaps = 7/365 (1%)
Query: 92 LGTQLHAVISKVGF-QSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGL 150
LG LH K+G ++HV V TA++ MY G + + +FD M E+N VTWN MI G
Sbjct: 34 LGDLLHGYACKLGLDRAHVMVGTAILGMYSKRGRFRKARLVFDYMEEKNSVTWNTMIDGY 93
Query: 151 VKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITI 210
++ G+++ A LF+EMP R+++SWT +I+G+ + EALA FR+M +P + I
Sbjct: 94 MRNGQVDDAVKLFDEMPERDLISWTAMINGFVKKGFHEEALAWFREM-QISGVKPDYVAI 152
Query: 211 LAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDIS 270
+A L A G + IH Y + F ++RV N LID Y +CGC+ A ++F+ +
Sbjct: 153 IAALAACTNLGALSFGLWIHRYVVSQDFKN-NVRVSNSLIDLYCRCGCVEFARQVFDKM- 210
Query: 271 VERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEG 330
E++ +VSW S+I GFA +G E++ F +MQ+ G KPN VTF L AC+H GLVEEG
Sbjct: 211 -EKRTVVSWNSVIVGFAANGHAHESLVYFRKMQEEGFKPNAVTFTGALAACNHVGLVEEG 269
Query: 331 LNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGAC 390
L +F M + + P I+HYGCL+D+ RAGRLE A K +P + +VV+ +LL AC
Sbjct: 270 LRYFQSMKRDYRISPRIEHYGCLVDLYSRAGRLEDALKVVQSMPMKPNEVVI-GSLLAAC 328
Query: 391 SFHG-NVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVP 449
G N + ERV + + ++ +YV++ N+ A G++ A ++RR M K P
Sbjct: 329 RTQGNNTVLAERVMKHLSDLNVKSHSNYVILSNMYAADGKWEGASKMRRKMKGLGLKKEP 388
Query: 450 GCSLV 454
G S +
Sbjct: 389 GFSSI 393
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 61/121 (50%), Gaps = 4/121 (3%)
Query: 81 IRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNL 140
+ C L + G +H + F+++V V+ +L+++Y G ++ + ++FD+M +R +
Sbjct: 156 LAACTNLGALSFGLWIHRYVVSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFDKMEKRTV 215
Query: 141 VTWNVMITGLVKWG----ELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRK 196
V+WN +I G G L + R + EE N V++TG + + E L F+
Sbjct: 216 VSWNSVIVGFAANGHAHESLVYFRKMQEEGFKPNAVTFTGALAACNHVGLVEEGLRYFQS 275
Query: 197 M 197
M
Sbjct: 276 M 276
>gi|302142753|emb|CBI19956.3| unnamed protein product [Vitis vinifera]
Length = 446
Score = 257 bits (656), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 145/346 (41%), Positives = 210/346 (60%), Gaps = 10/346 (2%)
Query: 113 TALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVV 172
T +V+ Y ++ + ++F+ MP+RN W+ MI+G K G ++ ARS+F+ +P RN+V
Sbjct: 99 TVMVDGYARNAEMEAAREVFEGMPQRNFFAWSSMISGYCKKGNVKEARSIFDRIPVRNLV 158
Query: 173 SWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGY 232
+W +I GY + S EAL F KM A E EP E+TI +VL A Q G + + + IH
Sbjct: 159 NWNSLISGYAQNGFSEEALEAFGKMQA-EGFEPDEVTIASVLSACSQLGLLDAGKKIHHM 217
Query: 233 GEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMG 292
+G + VLN L+D YAKCG + +A +FE ++ +N W S+ISGFA+HG
Sbjct: 218 MNHKGIK-LNQFVLNGLVDMYAKCGDLANARLIFEGMA--HRNRACWNSMISGFAIHGQS 274
Query: 293 KEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGC 352
KEA+E FGRM+ P+ +TFLSVL+AC+HGG V GL F +M E+ + IKHYGC
Sbjct: 275 KEALEFFGRMEDSHEGPDEITFLSVLSACAHGGFVNAGLEIFSRM-EKYGLTTGIKHYGC 333
Query: 353 LIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEME-- 410
LID+LGRAGR+++A +P + D VVW LLGAC H ++EM +RV +I++++
Sbjct: 334 LIDLLGRAGRIKEAYDLIKRMPVKPND-VVWGALLGACRVHLDMEMADRVVEEIVKVDSN 392
Query: 411 --RGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
G YVL+ NI A R+ AE++R M + K GCS +
Sbjct: 393 ISSGCDSHYVLLSNIYAASDRWEKAEKMRMEMANKGFQKTSGCSSI 438
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 97/288 (33%), Positives = 149/288 (51%), Gaps = 21/288 (7%)
Query: 111 VNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRN 170
+ T+LV MY G + DS K+FD MPERN VTWN MI G + G+ + A LFE+M R
Sbjct: 2 IGTSLVCMYAKCGNVVDSRKVFDYMPERNAVTWNAMICGYLGNGDSKSAVLLFEKMSIRT 61
Query: 171 VVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSE----ITILAVLPAIWQNGDVKSC 226
V+W +IDG+ R + A F + PSE +T ++ +N ++++
Sbjct: 62 AVTWIEMIDGFARSGDTETARRFFDDV-------PSELRNVVTWTVMVDGYARNAEMEAA 114
Query: 227 QLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGF 286
+ + +R F A+ + +I Y K G + A +F+ I V +NLV+W S+ISG+
Sbjct: 115 REVFEGMPQRNFFAW-----SSMISGYCKKGNVKEARSIFDRIPV--RNLVNWNSLISGY 167
Query: 287 AMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPD 346
A +G +EA+E FG+MQ G +P+ VT SVL+ACS GL++ G M + L
Sbjct: 168 AQNGFSEEALEAFGKMQAEGFEPDEVTIASVLSACSQLGLLDAGKKIHHMMNHKGIKLNQ 227
Query: 347 IKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHG 394
G L+DM + G L A G+ + W +++ + HG
Sbjct: 228 FVLNG-LVDMYAKCGDLANARLIFEGMAHR--NRACWNSMISGFAIHG 272
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 85/341 (24%), Positives = 134/341 (39%), Gaps = 87/341 (25%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+N+L+ Y+ ++A + ++Q P D T + ++ C+ L + G
Sbjct: 160 WNSLISGYAQNGFSEEALEAFGKMQ---AEGFEP-----DEVTIASVLSACSQLGLLDAG 211
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
++H +++ G + + +V LV+MY G L ++ +F+ M RN WN MI+G
Sbjct: 212 KKIHHMMNHKGIKLNQFVLNGLVDMYAKCGDLANARLIFEGMAHRNRACWNSMISGFAIH 271
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
G+ S EAL F +M + P EIT L+V
Sbjct: 272 GQ-------------------------------SKEALEFFGRMED-SHEGPDEITFLSV 299
Query: 214 LPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVER 273
L A G V + I EK G T I+ CLID + G I
Sbjct: 300 LSACAHGGFVNAGLEIFSRMEKYGLTT-GIKHYGCLIDLLGRAGRI-------------- 344
Query: 274 KNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNF 333
KEA + RM +KPN V + ++L AC V +
Sbjct: 345 -------------------KEAYDLIKRMP---VKPNDVVWGALLGACR----VHLDMEM 378
Query: 334 FDKMVEE-CEVLPDI-----KHYGCLIDMLGRAGRLEQAEK 368
D++VEE +V +I HY L ++ + R E+AEK
Sbjct: 379 ADRVVEEIVKVDSNISSGCDSHYVLLSNIYAASDRWEKAEK 419
>gi|297831842|ref|XP_002883803.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297329643|gb|EFH60062.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 697
Score = 256 bits (655), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 144/388 (37%), Positives = 219/388 (56%), Gaps = 10/388 (2%)
Query: 73 DSFTYSFLIRTCATLSHPNLGTQLHAVISKVG-FQSHVYVNTALVNMYVSLGFLKDSSKL 131
D T + +I CA+LS +G ++HA + K+ ++ + ++ A V+MY +K++ +
Sbjct: 252 DEVTLASVISACASLSAIKVGQEVHARVVKMDKLRNDIILSNAFVDMYAKCSRIKEARFI 311
Query: 132 FDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEAL 191
FD MP RN++ M++G + AR +F +M RNVVSW +I GYT+ + EAL
Sbjct: 312 FDSMPIRNVIAETSMVSGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEAL 371
Query: 192 ALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFT-----AFDIRVL 246
+LF ++ E P+ T +L A D+ H + K GF DI V
Sbjct: 372 SLF-CLLKRESVCPTHYTFANILKACADLADLHLGMQAHVHVLKHGFKFQSGEEDDIFVG 430
Query: 247 NCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVG 306
N LID Y KCGC+ +F + +ER + VSW ++I GFA +G G EA+E F M G
Sbjct: 431 NSLIDMYVKCGCVEEGYLVFRKM-MER-DCVSWNAMIIGFAQNGYGNEALELFREMLDSG 488
Query: 307 LKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQA 366
KP+ +T + VL+AC H G VEEG ++F M + V P HY C++D+LGRAG LE+A
Sbjct: 489 EKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEA 548
Query: 367 EKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAG 426
+ +P + D V+W +LL AC H N+ +G+ V K+ E+E G YVL+ N+ A
Sbjct: 549 KSIIEEMPVQ-PDSVIWGSLLAACKVHRNITLGKYVAEKLFEVETSNSGPYVLLSNMYAE 607
Query: 427 VGRFGDAERLRRVMDERNAFKVPGCSLV 454
+G++GDA +R++M + K PGCS +
Sbjct: 608 LGKWGDAMNVRKLMRKEGVTKQPGCSWI 635
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 98/357 (27%), Positives = 183/357 (51%), Gaps = 17/357 (4%)
Query: 58 QQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLGTQ-LHAVISKVGFQSHVYVNTALV 116
++I+ L S ++ L+ +C L + + +HA + K GF + V++ L+
Sbjct: 3 RKIFLKLAGDLSSFTVSSPFAKLLDSCIKLKLSAIDVRCVHASVIKSGFSNEVFIQNRLI 62
Query: 117 NMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTG 176
+ Y G L+D +LFD+MP+RN+ TWN ++TGL K G L+ A SLF MP R+ +W
Sbjct: 63 DAYAKCGSLEDGRQLFDKMPQRNVFTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNS 122
Query: 177 IIDGYTRMNRSNEALALFRKM-----VACEYTEPSEITILAVLPAIWQNGDVKSCQLIHG 231
++ G+ + +R EAL F M V EYT S ++ + L D+ IH
Sbjct: 123 MVSGFAQHDRCEEALYYFAMMHKEGFVLNEYTFASGLSACSGL------NDMNRGVQIHS 176
Query: 232 YGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGM 291
K + D+ + + L+D Y+KCG + A ++F+++ +N+VSW S+I+ + +G
Sbjct: 177 LIAKSPCLS-DVYIGSALVDMYSKCGNVNDAQQVFDEMG--DRNVVSWNSLITCYEQNGP 233
Query: 292 GKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYG 351
EA++ F M + ++P+ VT SV++AC+ ++ G ++V+ ++ DI
Sbjct: 234 AVEALKVFQVMLESWVEPDEVTLASVISACASLSAIKVGQEVHARVVKMDKLRNDIILSN 293
Query: 352 CLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILE 408
+DM + R+++A +P I +V+ +++ + + + + K+ E
Sbjct: 294 AFVDMYAKCSRIKEARFIFDSMP--IRNVIAETSMVSGYAMAASTKAARLMFTKMAE 348
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 101/407 (24%), Positives = 178/407 (43%), Gaps = 82/407 (20%)
Query: 71 LFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSK 130
+ + +T++ + C+ L+ N G Q+H++I+K S VY+ +ALV+MY G + D+ +
Sbjct: 149 VLNEYTFASGLSACSGLNDMNRGVQIHSLIAKSPCLSDVYIGSALVDMYSKCGNVNDAQQ 208
Query: 131 LFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEA 190
+FDEM +RN+V+WN +IT C Y + + EA
Sbjct: 209 VFDEMGDRNVVSWNSLIT-------------------C------------YEQNGPAVEA 237
Query: 191 LALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLI 250
L +F+ M+ + EP E+T+ +V+ A +K Q +H K DI + N +
Sbjct: 238 LKVFQVMLE-SWVEPDEVTLASVISACASLSAIKVGQEVHARVVKMDKLRNDIILSNAFV 296
Query: 251 DTYAKCGCIFSASKLFEDISVE-----------------------------RKNLVSWTS 281
D YAKC I A +F+ + + +N+VSW +
Sbjct: 297 DMYAKCSRIKEARFIFDSMPIRNVIAETSMVSGYAMAASTKAARLMFTKMAERNVVSWNA 356
Query: 282 IISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNAC-----------SHGGLVEEG 330
+I+G+ +G +EA+ F +++ + P TF ++L AC +H +++ G
Sbjct: 357 LIAGYTQNGENEEALSLFCLLKRESVCPTHYTFANILKACADLADLHLGMQAHVHVLKHG 416
Query: 331 LNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGAC 390
F + EE DI LIDM + G +E+ + D V W ++
Sbjct: 417 FKF--QSGEE----DDIFVGNSLIDMYVKCGCVEEGYLVFRKMMER--DCVSWNAMIIGF 468
Query: 391 SFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLR 437
+ +G + R++L + G D++ M +L+ G G E R
Sbjct: 469 AQNGYGNEALELFREML--DSGEKPDHITMIGVLSACGHAGFVEEGR 513
>gi|242033621|ref|XP_002464205.1| hypothetical protein SORBIDRAFT_01g014070 [Sorghum bicolor]
gi|241918059|gb|EER91203.1| hypothetical protein SORBIDRAFT_01g014070 [Sorghum bicolor]
Length = 521
Score = 256 bits (655), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 148/431 (34%), Positives = 216/431 (50%), Gaps = 16/431 (3%)
Query: 29 HHSQ----LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTC 84
HH + ++NT++ S P+ A L+ + SP PP + T L+
Sbjct: 91 HHPRPNSFMWNTVIRALSDGARPEAAVALFVDMLG------SPTPP--ERRTLPSLLAAY 142
Query: 85 ATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWN 144
A L G LH + K+G YV A + MY S ++ LF + PE + V N
Sbjct: 143 ARLGRAGDGAALHGMALKLGLAGDAYVRNATIAMYASCARADEALALFGQCPEFDAVACN 202
Query: 145 VMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTE 204
I L + G ++ AR++F+ MP R V +W+ ++ Y R R EALALF M A + E
Sbjct: 203 SAIVALARAGRVDEARAVFDGMPERTVATWSAMVSAYARAARCGEALALFSAMQA-DGVE 261
Query: 205 PSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASK 264
P+ +++VL G + +H Y ++ G A + V+ L+D Y KCG + A +
Sbjct: 262 PNANVLVSVLGCCASLGALDQGAWVHAYIDRHG-VAMNALVVTALVDMYCKCGSVDDARQ 320
Query: 265 LFEDI-SVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSH 323
+F+ S L SW S++ G A+HG +EAV F ++ GL P+ VTF++VL A H
Sbjct: 321 VFDAARSQGSAKLSSWNSMMQGLAVHGQWREAVALFSELRSYGLSPDNVTFIAVLTAYGH 380
Query: 324 GGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVW 383
G+ +E F M E V P I+HYGCL+D L RAGRL +AE +P D VW
Sbjct: 381 AGMPDEAQAAFASMATEHSVEPGIEHYGCLVDALARAGRLREAEDAIRSMPMA-PDAAVW 439
Query: 384 RTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDER 443
LL C HG+ E+G R R+ + + G YVL ++LA G G +R M E
Sbjct: 440 GALLSGCRLHGDAELGARAAREAVRCDPRDSGAYVLAASVLARGGNPGRGAGVRGRMREA 499
Query: 444 NAFKVPGCSLV 454
KVPGCS++
Sbjct: 500 GVGKVPGCSMI 510
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 71/327 (21%), Positives = 134/327 (40%), Gaps = 36/327 (11%)
Query: 84 CATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSS---KLFDEMPERNL 140
CA+++H QLHA + K G + V G +D S +L P N
Sbjct: 43 CASMAHLR---QLHAALVKSGLAKDPIAASRAVAFCAGPG--RDVSYAERLVRHHPRPNS 97
Query: 141 VTWNVMITGLVKWGELEFARSLFEEM------PCRNVVSWTGIIDGYTRMNRSNE----- 189
WN +I L E A +LF +M P R + ++ Y R+ R+ +
Sbjct: 98 FMWNTVIRALSDGARPEAAVALFVDMLGSPTPPERRTL--PSLLAAYARLGRAGDGAALH 155
Query: 190 ALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCL 249
+AL + Y + I + A ++ + + +G+ FD N
Sbjct: 156 GMALKLGLAGDAYVRNATIAMYASC--------ARADEALALFGQ---CPEFDAVACNSA 204
Query: 250 IDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKP 309
I A+ G + A +F+ + + + +W++++S +A EA+ F MQ G++P
Sbjct: 205 IVALARAGRVDEARAVFDGM--PERTVATWSAMVSAYARAARCGEALALFSAMQADGVEP 262
Query: 310 NRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKT 369
N +SVL C+ G +++G + ++ V + L+DM + G ++ A +
Sbjct: 263 NANVLVSVLGCCASLGALDQG-AWVHAYIDRHGVAMNALVVTALVDMYCKCGSVDDARQV 321
Query: 370 ALGIPSEIT-DVVVWRTLLGACSFHGN 395
S+ + + W +++ + HG
Sbjct: 322 FDAARSQGSAKLSSWNSMMQGLAVHGQ 348
>gi|125546028|gb|EAY92167.1| hypothetical protein OsI_13880 [Oryza sativa Indica Group]
Length = 671
Score = 256 bits (655), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 142/382 (37%), Positives = 217/382 (56%), Gaps = 37/382 (9%)
Query: 73 DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLF 132
D++T+ L++ CA+ G Q H V K G H YV L+NMY
Sbjct: 137 DTYTFVSLLKACASARAGEEGRQAHGVAVKAGAAEHEYVAPTLINMYA------------ 184
Query: 133 DEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALA 192
+ G++ AR +F+ M VVS+ +I R + EAL
Sbjct: 185 -------------------ECGDVRAARVMFDRMDGECVVSYNAMITASVRSSLPGEALV 225
Query: 193 LFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDT 252
LFR+M A + +P+ +T+++VL A G ++ + IH Y K + ++V LID
Sbjct: 226 LFREMQA-KGLKPTSVTLISVLSACALLGALELGRWIHDYIRKMRLDSL-VKVNTALIDM 283
Query: 253 YAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRV 312
YAKCG + A +F+D+ E ++ +W+ ++ +A HG G+EA+ F M+K G+KP+ V
Sbjct: 284 YAKCGSLEDAIGVFQDM--ESRDKQAWSVMMVAYANHGYGREAISMFEEMKKQGMKPDDV 341
Query: 313 TFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALG 372
TFL VL ACSH G+V EGL +FD M E ++ IKHYGC+ D+L R+G+LE+A K
Sbjct: 342 TFLGVLYACSHSGMVSEGLQYFDSM-REYGIVSGIKHYGCVTDLLARSGQLERAYKFIDE 400
Query: 373 IPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGD 432
+P + T ++WRTLL AC+ HG+V+MG+RV +ILE++ +GGDYV+ N+ A GR+ +
Sbjct: 401 LPIKPT-AILWRTLLSACAGHGDVDMGKRVFERILELDDSHGGDYVIFSNLCANTGRWEE 459
Query: 433 AERLRRVMDERNAFKVPGCSLV 454
+R++M E+ KVPGCS +
Sbjct: 460 MNMVRKLMSEKGVVKVPGCSSI 481
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 79/322 (24%), Positives = 134/322 (41%), Gaps = 53/322 (16%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+N ++ + P +A +L++++Q L P S T ++ CA L LG
Sbjct: 207 YNAMITASVRSSLPGEALVLFREMQA------KGLKPT--SVTLISVLSACALLGALELG 258
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
+H I K+ S V VNTAL++MY G L+D+ +F +M R+ W+VM+
Sbjct: 259 RWIHDYIRKMRLDSLVKVNTALIDMYAKCGSLEDAIGVFQDMESRDKQAWSVMMVAYANH 318
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
G A S+FEEM + + +P ++T L V
Sbjct: 319 GYGREAISMFEEMKKQGM--------------------------------KPDDVTFLGV 346
Query: 214 LPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVER 273
L A +G V + G + I+ C+ D A+ G + A K +++ + +
Sbjct: 347 LYACSHSGMVSEGLQYFDSMREYGIVS-GIKHYGCVTDLLARSGQLERAYKFIDELPI-K 404
Query: 274 KNLVSWTSIISGFAMHG---MGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEG 330
+ W +++S A HG MGK E + + ++ N C++ G EE
Sbjct: 405 PTAILWRTLLSACAGHGDVDMGKRVFERILELD----DSHGGDYVIFSNLCANTGRWEE- 459
Query: 331 LNFFDKMVEECEVLPDIKHYGC 352
+N K++ E V +K GC
Sbjct: 460 MNMVRKLMSEKGV---VKVPGC 478
>gi|148909481|gb|ABR17838.1| unknown [Picea sitchensis]
Length = 795
Score = 256 bits (655), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 148/421 (35%), Positives = 227/421 (53%), Gaps = 44/421 (10%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+N ++ YSL +A + ++Q + P +S T ++ CA L G
Sbjct: 290 WNAIIGGYSLNSQHHEALAFFNRMQV------RGIKP--NSITMVSVLPACAHLFALEQG 341
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
Q+H + GF+S+ V ALVNMY K
Sbjct: 342 QQIHGYAIRSGFESNDVVGNALVNMYA-------------------------------KC 370
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
G + A LFE MP +NVV+W II GY++ +EALALF +M A + +P I++V
Sbjct: 371 GNVNSAYKLFERMPKKNVVAWNAIISGYSQHGHPHEALALFIEMQA-QGIKPDSFAIVSV 429
Query: 214 LPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVER 273
LPA ++ + IHGY + GF + ++ V L+D YAKCG + +A KLFE +
Sbjct: 430 LPACAHFLALEQGKQIHGYTIRSGFES-NVVVGTGLVDIYAKCGNVNTAQKLFERMP--E 486
Query: 274 KNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNF 333
+++VSWT++I + +HG G++A+ F +MQ+ G K + + F ++L ACSH GLV++GL +
Sbjct: 487 QDVVSWTTMILAYGIHGHGEDALALFSKMQETGTKLDHIAFTAILTACSHAGLVDQGLQY 546
Query: 334 FDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFH 393
F M + + P ++HY CL+D+LGRAG L++A + E D VW LLGAC H
Sbjct: 547 FQCMKSDYGLAPKLEHYACLVDLLGRAGHLDEANGIIKNMSLE-PDANVWGALLGACRIH 605
Query: 394 GNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSL 453
N+E+GE+ + + E++ G YVL+ NI A R+ D +LR++M E+ K PGCS+
Sbjct: 606 CNIELGEQAAKHLFELDPDNAGYYVLLSNIYAEAQRWEDVAKLRKMMKEKGVKKQPGCSV 665
Query: 454 V 454
V
Sbjct: 666 V 666
Score = 168 bits (425), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 129/455 (28%), Positives = 205/455 (45%), Gaps = 91/455 (20%)
Query: 49 KAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSH 108
KA LY Q+Q+ + + P D + +I+ C + S G ++H I GF+S
Sbjct: 103 KALRLYYQMQR------TGINP--DKLVFLSVIKACGSQSDLQAGRKVHEDIIARGFESD 154
Query: 109 VYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPC 168
V V TAL +MY G L+++ ++FD MP+R++V+WN +I G + G+ A +LF EM
Sbjct: 155 VIVGTALASMYTKCGSLENARQVFDRMPKRDVVSWNAIIAGYSQNGQPYEALALFSEMQV 214
Query: 169 R---------------------------------------NVVSWTGIIDGYTRMNRSNE 189
+V+ G+++ Y + N
Sbjct: 215 NGIKPNSSTLVSVMPVCAHLLALEQGKQIHCYAIRSGIESDVLVVNGLVNMYAKCGNVNT 274
Query: 190 ALALFRKM------------------------------VACEYTEPSEITILAVLPAIWQ 219
A LF +M + +P+ IT+++VLPA
Sbjct: 275 AHKLFERMPIRDVASWNAIIGGYSLNSQHHEALAFFNRMQVRGIKPNSITMVSVLPACAH 334
Query: 220 NGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSW 279
++ Q IHGY + GF + D+ V N L++ YAKCG + SA KLFE + +KN+V+W
Sbjct: 335 LFALEQGQQIHGYAIRSGFESNDV-VGNALVNMYAKCGNVNSAYKLFERMP--KKNVVAW 391
Query: 280 TSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVE 339
+IISG++ HG EA+ F MQ G+KP+ +SVL AC+H +E+G +
Sbjct: 392 NAIISGYSQHGHPHEALALFIEMQAQGIKPDSFAIVSVLPACAHFLALEQGKQIHGYTIR 451
Query: 340 ---ECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNV 396
E V+ L+D+ + G + A+K +P + DVV W T++ A HG+
Sbjct: 452 SGFESNVVVGTG----LVDIYAKCGNVNTAQKLFERMPEQ--DVVSWTTMILAYGIHGHG 505
Query: 397 EMGERVTRKILEMERGYGGDYVLMYNILAGVGRFG 431
E + K+ E G D++ IL G
Sbjct: 506 EDALALFSKM--QETGTKLDHIAFTAILTACSHAG 538
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 113/224 (50%), Gaps = 7/224 (3%)
Query: 170 NVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLI 229
N V W I GY + N+AL L+ +M P ++ L+V+ A D+++ + +
Sbjct: 84 NAVVWKETIIGYVKNGFWNKALRLYYQMQRTG-INPDKLVFLSVIKACGSQSDLQAGRKV 142
Query: 230 HGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMH 289
H RGF + D+ V L Y KCG + +A ++F+ + ++++VSW +II+G++ +
Sbjct: 143 HEDIIARGFES-DVIVGTALASMYTKCGSLENARQVFDRMP--KRDVVSWNAIIAGYSQN 199
Query: 290 GMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKH 349
G EA+ F MQ G+KPN T +SV+ C+H +E+G + + D+
Sbjct: 200 GQPYEALALFSEMQVNGIKPNSSTLVSVMPVCAHLLALEQGKQIHCYAIRS-GIESDVLV 258
Query: 350 YGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFH 393
L++M + G + A K +P I DV W ++G S +
Sbjct: 259 VNGLVNMYAKCGNVNTAHKLFERMP--IRDVASWNAIIGGYSLN 300
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 57/122 (46%), Gaps = 3/122 (2%)
Query: 273 RKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLN 332
R N V W I G+ +G +A+ + +MQ+ G+ P+++ FLSV+ AC ++ G
Sbjct: 82 RNNAVVWKETIIGYVKNGFWNKALRLYYQMQRTGINPDKLVFLSVIKACGSQSDLQAGRK 141
Query: 333 FFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSF 392
+ ++ D+ L M + G LE A + +P DVV W ++ S
Sbjct: 142 VHEDIIAR-GFESDVIVGTALASMYTKCGSLENARQVFDRMPKR--DVVSWNAIIAGYSQ 198
Query: 393 HG 394
+G
Sbjct: 199 NG 200
>gi|296088715|emb|CBI38165.3| unnamed protein product [Vitis vinifera]
Length = 654
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 148/390 (37%), Positives = 220/390 (56%), Gaps = 33/390 (8%)
Query: 66 SPLPPLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVG-FQSHVYVNTALVNMYVSLGF 124
S L P D T + ++ CA+L G Q+HA + K F+ + + ALV+MY
Sbjct: 242 SGLEP--DEVTLASVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSK 299
Query: 125 LKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRM 184
+ ++ ++FD M RN+V+ M++G + ++ AR +F +M RNVVSW +I GYT+
Sbjct: 300 VNEARRVFDRMSIRNVVSETSMVSGYARAASVKAARFMFSKMTQRNVVSWNALIAGYTQN 359
Query: 185 NRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIR 244
+ EAL LFR ++ E P+ T +L + DI
Sbjct: 360 GENEEALRLFR-LLKRESIWPTHYTFGNLLKS-------------------------DIF 393
Query: 245 VLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQK 304
V N LID Y KCG I S++FE + + ++ VSW +II G+A +G G EA++ F +M
Sbjct: 394 VGNSLIDMYMKCGSIEDGSRVFEKM--KERDCVSWNAIIVGYAQNGYGAEALQIFRKMLV 451
Query: 305 VGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLE 364
G KP+ VT + VL ACSH GLVEEG ++F M EE ++P HY C++D+LGRAG L
Sbjct: 452 CGEKPDHVTMIGVLCACSHAGLVEEGRHYFFSM-EEHGLIPLKDHYTCMVDLLGRAGCLN 510
Query: 365 QAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNIL 424
+A+ +P D VVW +LL AC HGN+EMG+ K+LE++ G YVL+ N+
Sbjct: 511 EAKNLIEAMPVN-PDAVVWGSLLAACKVHGNIEMGKHAAEKLLEIDPWNSGPYVLLSNMY 569
Query: 425 AGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
A +GR+GD R+R++M ++ K PGCS +
Sbjct: 570 AELGRWGDVVRVRKLMRQQGVTKQPGCSWI 599
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 98/314 (31%), Positives = 163/314 (51%), Gaps = 15/314 (4%)
Query: 57 LQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLGTQL-HAVISKVGFQSHVYVNTAL 115
++ +Y + SP L DS S R GT+L HA I F +++ L
Sbjct: 7 VRDLYLPNSSPFAKLLDSCLRSRSAR----------GTRLVHARILMTQFSMEIFIQNRL 56
Query: 116 VNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWT 175
+++Y L D+ KLFD MP+RN TWN +I+ L K G L+ A LF MP + SW
Sbjct: 57 IDVYGKCDCLDDARKLFDRMPQRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWN 116
Query: 176 GIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEK 235
++ G+ + +R E+L F KM ++ +E + + L A D+ +H K
Sbjct: 117 SMVSGFAQHDRFEESLEYFVKMHREDFL-LNEYSFGSALSACAGLMDLNMGTQVHALVSK 175
Query: 236 RGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEA 295
++ D+ + + LID Y+KCG + A ++F + +ER NLV+W S+I+ + +G EA
Sbjct: 176 SRYST-DVYMGSALIDMYSKCGSVACAEEVFSGM-IER-NLVTWNSLITCYEQNGPASEA 232
Query: 296 VENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLID 355
+E F RM GL+P+ VT SV++AC+ ++EGL ++V+ + D+ L+D
Sbjct: 233 LEVFVRMMDSGLEPDEVTLASVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVD 292
Query: 356 MLGRAGRLEQAEKT 369
M + ++ +A +
Sbjct: 293 MYAKCSKVNEARRV 306
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 97/378 (25%), Positives = 170/378 (44%), Gaps = 54/378 (14%)
Query: 71 LFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSK 130
L + +++ + CA L N+GTQ+HA++SK + + VY+ +AL++MY G + + +
Sbjct: 144 LLNEYSFGSALSACAGLMDLNMGTQVHALVSKSRYSTDVYMGSALIDMYSKCGSVACAEE 203
Query: 131 LFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEA 190
+F M ER N+V+W +I Y + ++EA
Sbjct: 204 VFSGMIER-------------------------------NLVTWNSLITCYEQNGPASEA 232
Query: 191 LALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLI 250
L +F +M+ EP E+T+ +V+ A +K IH K D+ + N L+
Sbjct: 233 LEVFVRMMD-SGLEPDEVTLASVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALV 291
Query: 251 DTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPN 310
D YAKC + A ++F+ +S+ +N+VS TS++SG+A K A F +M + N
Sbjct: 292 DMYAKCSKVNEARRVFDRMSI--RNVVSETSMVSGYARAASVKAARFMFSKMT----QRN 345
Query: 311 RVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLP-----------DIKHYGCLIDMLGR 359
V++ +++ + G EE L F ++++ + P DI LIDM +
Sbjct: 346 VVSWNALIAGYTQNGENEEALRLF-RLLKRESIWPTHYTFGNLLKSDIFVGNSLIDMYMK 404
Query: 360 AGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVL 419
G +E + + D V W ++ + +G ++ RK+L G D+V
Sbjct: 405 CGSIEDGSRVFEKMKER--DCVSWNAIIVGYAQNGYGAEALQIFRKMLVC--GEKPDHVT 460
Query: 420 MYNILAGVGRFGDAERLR 437
M +L G E R
Sbjct: 461 MIGVLCACSHAGLVEEGR 478
>gi|224115100|ref|XP_002332237.1| predicted protein [Populus trichocarpa]
gi|222831850|gb|EEE70327.1| predicted protein [Populus trichocarpa]
Length = 444
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 131/320 (40%), Positives = 196/320 (61%), Gaps = 5/320 (1%)
Query: 135 MPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALF 194
MPE++LV+ MIT K+G ++ AR LF+ + R+ + W +IDGY + NE L LF
Sbjct: 1 MPEKSLVSLTAMITCYAKYGMIDEARVLFDGLEERDAICWNVMIDGYAQHGLPNEGLLLF 60
Query: 195 RKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYA 254
R+M+ + P+E+T+LAVL A Q G +++ + +H Y E G ++RV LID Y+
Sbjct: 61 RQMLNAK-VRPNEVTVLAVLSACGQTGALETGRWVHSYIENNGI-GINVRVGTSLIDMYS 118
Query: 255 KCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTF 314
KCG + A +FE IS K++V+W S++ G+AMHG ++A+ F M +G +P +TF
Sbjct: 119 KCGSLEDARLVFERIS--NKDVVAWNSMVVGYAMHGFSQDALRLFKEMCMIGYQPTDITF 176
Query: 315 LSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIP 374
+ VLNACSH GLV EG FF M +E + P ++HYGC++++LGRAG LE+A + +
Sbjct: 177 IGVLNACSHAGLVSEGWKFFYSMKDEYGIEPKVEHYGCMVNLLGRAGYLEEAYELVKNME 236
Query: 375 SEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAE 434
+ D V+W TLLGAC HGN+ +GE++ ++ G YVL+ NI A G +
Sbjct: 237 ID-QDPVLWGTLLGACRLHGNIALGEQIAEYLVSQNLANSGTYVLLSNIYAAAGNWEGVA 295
Query: 435 RLRRVMDERNAFKVPGCSLV 454
R+R +M E K PGCS +
Sbjct: 296 RVRTLMKESGFEKEPGCSSI 315
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/258 (20%), Positives = 112/258 (43%), Gaps = 43/258 (16%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+N ++ Y+ P + LL++Q+ ++ + P + T ++ C G
Sbjct: 40 WNVMIDGYAQHGLPNEGLLLFRQML------NAKVRP--NEVTVLAVLSACGQTGALETG 91
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
+H+ I G +V V T+L++MY G L+D+ +F+ + +++V WN M+
Sbjct: 92 RWVHSYIENNGIGINVRVGTSLIDMYSKCGSLEDARLVFERISNKDVVAWNSMVV----- 146
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
GY S +AL LF++M Y +P++IT + V
Sbjct: 147 --------------------------GYAMHGFSQDALRLFKEMCMIGY-QPTDITFIGV 179
Query: 214 LPAIWQNGDV-KSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVE 272
L A G V + + + ++ G + C+++ + G + A +L +++ ++
Sbjct: 180 LNACSHAGLVSEGWKFFYSMKDEYGIEP-KVEHYGCMVNLLGRAGYLEEAYELVKNMEID 238
Query: 273 RKNLVSWTSIISGFAMHG 290
++ V W +++ +HG
Sbjct: 239 -QDPVLWGTLLGACRLHG 255
>gi|449433141|ref|XP_004134356.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 654
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 143/422 (33%), Positives = 237/422 (56%), Gaps = 43/422 (10%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNL 92
++ +++ Y P +A LLYK++++ SP D T + L+ CA L +
Sbjct: 147 VWTSMISGYMKNHCPNEALLLYKKMEE---DGFSP-----DEVTMATLVSACAELKDLGV 198
Query: 93 GTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVK 152
G +LH+ I ++ + + +ALVNMY K
Sbjct: 199 GMKLHSHIREMDMKICAVLGSALVNMYA-------------------------------K 227
Query: 153 WGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILA 212
G+L+ AR +F+++ ++V +W+ +I GY + NRS EAL LFR++ P+E+TILA
Sbjct: 228 CGDLKTARQVFDKLSDKDVYAWSALIFGYVKNNRSTEALQLFREVAGGSNMRPNEVTILA 287
Query: 213 VLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVE 272
V+ A Q GD+++ + +H Y R + + N LID ++KCG I +A ++F+ +S
Sbjct: 288 VISACAQLGDLETGRWVHDY-ITRTQKGHSVSLNNSLIDMFSKCGDIDAAKRIFDSMSY- 345
Query: 273 RKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLN 332
K+L+SW S+++GFA+HG+G+EA+ F MQ L+P+ +TF+ VL ACSH GLV+EG
Sbjct: 346 -KDLISWNSMVNGFALHGLGREALAQFRLMQTTDLQPDEITFIGVLTACSHAGLVQEGKK 404
Query: 333 FFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSF 392
F ++ V +HYGC++D+L RAG L +A + +P + D +W ++LGAC
Sbjct: 405 LFYEIEALYGVRLKSEHYGCMVDLLCRAGLLAEAREFIRVMPLQ-PDGAIWGSMLGACRV 463
Query: 393 HGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCS 452
+ N+E+GE R +L++E G Y+L+ NI A + + +++R +M+E+ K PGCS
Sbjct: 464 YNNLELGEEAARFLLKLEPTNDGVYILLSNIYAKRKMWNEVKKVRELMNEKGIQKTPGCS 523
Query: 453 LV 454
V
Sbjct: 524 SV 525
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 91/366 (24%), Positives = 171/366 (46%), Gaps = 54/366 (14%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+N++L + + P++A Q YT + D FT+ L++ CA L +G
Sbjct: 46 WNSMLRAFVNSNMPRRAL-------QSYTEMLERSRNVPDRFTFPSLLKGCALLLEFKVG 98
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
LH + K S +Y+ T L+NMY + G LK + LF+ M RN V W
Sbjct: 99 KVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHRNKVVW---------- 148
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
T +I GY + + NEAL L++KM ++ P E+T+ +
Sbjct: 149 ---------------------TSMISGYMKNHCPNEALLLYKKMEEDGFS-PDEVTMATL 186
Query: 214 LPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVL----NCLIDTYAKCGCIFSASKLFEDI 269
+ A + D+ +H + D+++ + L++ YAKCG + +A ++F+ +
Sbjct: 187 VSACAELKDLGVGMKLHSH-----IREMDMKICAVLGSALVNMYAKCGDLKTARQVFDKL 241
Query: 270 SVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQ-KVGLKPNRVTFLSVLNACSHGGLVE 328
S K++ +W+++I G+ + EA++ F + ++PN VT L+V++AC+ G +E
Sbjct: 242 S--DKDVYAWSALIFGYVKNNRSTEALQLFREVAGGSNMRPNEVTILAVISACAQLGDLE 299
Query: 329 EGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLG 388
G D + + + LIDM + G ++ A++ + + D++ W +++
Sbjct: 300 TGRWVHD-YITRTQKGHSVSLNNSLIDMFSKCGDIDAAKRIFDSMSYK--DLISWNSMVN 356
Query: 389 ACSFHG 394
+ HG
Sbjct: 357 GFALHG 362
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 75/309 (24%), Positives = 136/309 (44%), Gaps = 27/309 (8%)
Query: 144 NVMITGLVKWGELE--FARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACE 201
N +I ++ G L +A S+F +V++W ++ + N AL + +M+
Sbjct: 14 NKLIAHVLSMGSLGVGYAYSVFAHTRELDVLTWNSMLRAFVNSNMPRRALQSYTEMLERS 73
Query: 202 YTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFS 261
P T ++L + K +++HG K + D+ + L++ YA CG + S
Sbjct: 74 RNVPDRFTFPSLLKGCALLLEFKVGKVLHGQVVKYMLHS-DLYIETTLLNMYAACGDLKS 132
Query: 262 ASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNAC 321
A LFE + +N V WTS+ISG+ + EA+ + +M++ G P+ VT ++++AC
Sbjct: 133 ARFLFERMG--HRNKVVWTSMISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSAC 190
Query: 322 SHGGLVEEGLNFFDKMVEE----CEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEI 377
+ + G+ + E C VL L++M + G L+ A + + +
Sbjct: 191 AELKDLGVGMKLHSHIREMDMKICAVLG-----SALVNMYAKCGDLKTARQVFDKLSDK- 244
Query: 378 TDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGG-----DYVLMYNILAGVGRFGD 432
DV W L+ G V+ R T + GG + V + +++ + GD
Sbjct: 245 -DVYAWSALI-----FGYVK-NNRSTEALQLFREVAGGSNMRPNEVTILAVISACAQLGD 297
Query: 433 AERLRRVMD 441
E R V D
Sbjct: 298 LETGRWVHD 306
>gi|242042285|ref|XP_002468537.1| hypothetical protein SORBIDRAFT_01g047570 [Sorghum bicolor]
gi|241922391|gb|EER95535.1| hypothetical protein SORBIDRAFT_01g047570 [Sorghum bicolor]
Length = 495
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 134/357 (37%), Positives = 214/357 (59%), Gaps = 12/357 (3%)
Query: 105 FQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFE 164
+ ++V +LV+MY + + ++FDE+P NLV+WN ++ G K +L AR +F
Sbjct: 91 LPADLHVANSLVHMYAACAMPDHAHRVFDEIPRPNLVSWNALLDGYAKCRDLPAARQVFA 150
Query: 165 EMPCRNVVSWTGIIDGYTRMNRSNEALALFRKM--VACEYTE-------PSEITILAVLP 215
MP R+VVSW+ +IDG + EALALF M A E +++T+++VL
Sbjct: 151 RMPQRDVVSWSAMIDGCVKCGEHREALALFEMMENAAARSVEDGGGGARANDVTMVSVLG 210
Query: 216 AIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKN 275
A GD++ + +H +RGF ++++ L+D YAKCG I A ++F + VE +
Sbjct: 211 ACANLGDLERGRWVHRCLRERGFP-LNLKLATSLVDMYAKCGAIHEALEMFWAVPVESTD 269
Query: 276 LVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFD 335
++ W ++I G A+HGM E+VE F MQ G+ P+ +T+L +L+AC HGGLV+E FF
Sbjct: 270 VLIWNAVIGGLAVHGMATESVEIFQEMQCAGVAPDEITYLCLLSACVHGGLVDEAWKFF- 328
Query: 336 KMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGN 395
+ +E + P ++HY CL+D+LGRAGRLE+ +P + + V V L AC HG
Sbjct: 329 RSLEAQGLRPHVEHYACLVDVLGRAGRLEEVYGVVKSMPMKPS-VSVLGAFLNACHLHGW 387
Query: 396 VEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCS 452
VE+GE V R++++++ + G Y+ + NI A R+ +A++ R+VM++R KVPG S
Sbjct: 388 VELGEVVGRQLVQLQPDHDGRYIGLSNIYAVARRWQEAKKARKVMEDRGVKKVPGFS 444
>gi|115455891|ref|NP_001051546.1| Os03g0795200 [Oryza sativa Japonica Group]
gi|50400032|gb|AAT76420.1| putative PPR repeat containing protein [Oryza sativa Japonica
Group]
gi|108711537|gb|ABF99332.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113550017|dbj|BAF13460.1| Os03g0795200 [Oryza sativa Japonica Group]
Length = 611
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 142/382 (37%), Positives = 217/382 (56%), Gaps = 37/382 (9%)
Query: 73 DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLF 132
D++T+ L++ CA+ G Q H V K G H YV L+NMY
Sbjct: 137 DTYTFVSLLKACASARAGEEGRQAHGVAVKAGAAEHEYVAPTLINMYA------------ 184
Query: 133 DEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALA 192
+ G++ AR +F+ M VVS+ +I R + EAL
Sbjct: 185 -------------------ECGDVRAARVMFDRMDGECVVSYNAMITASVRSSLPGEALV 225
Query: 193 LFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDT 252
LFR+M A + +P+ +T+++VL A G ++ + IH Y K + ++V LID
Sbjct: 226 LFREMQA-KGLKPTSVTLISVLSACALLGALELGRWIHDYIRKMRLDSL-VKVNTALIDM 283
Query: 253 YAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRV 312
YAKCG + A +F+D+ E ++ +W+ ++ +A HG G+EA+ F M+K G+KP+ V
Sbjct: 284 YAKCGSLEDAIGVFQDM--ESRDKQAWSVMMVAYANHGYGREAISMFEEMKKQGMKPDDV 341
Query: 313 TFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALG 372
TFL VL ACSH G+V EGL +FD M E ++ IKHYGC+ D+L R+G+LE+A K
Sbjct: 342 TFLGVLYACSHSGMVSEGLQYFDSM-REYGIVSGIKHYGCVTDLLARSGQLERAYKFIDE 400
Query: 373 IPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGD 432
+P + T ++WRTLL AC+ HG+V+MG+RV +ILE++ +GGDYV+ N+ A GR+ +
Sbjct: 401 LPIKPT-AILWRTLLSACAGHGDVDMGKRVFERILELDDSHGGDYVIFSNLCANTGRWEE 459
Query: 433 AERLRRVMDERNAFKVPGCSLV 454
+R++M E+ KVPGCS +
Sbjct: 460 MNMVRKLMSEKGVVKVPGCSSI 481
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 79/322 (24%), Positives = 134/322 (41%), Gaps = 53/322 (16%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+N ++ + P +A +L++++Q L P S T ++ CA L LG
Sbjct: 207 YNAMITASVRSSLPGEALVLFREMQA------KGLKP--TSVTLISVLSACALLGALELG 258
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
+H I K+ S V VNTAL++MY G L+D+ +F +M R+ W+VM+
Sbjct: 259 RWIHDYIRKMRLDSLVKVNTALIDMYAKCGSLEDAIGVFQDMESRDKQAWSVMMVAYANH 318
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
G A S+FEEM + + +P ++T L V
Sbjct: 319 GYGREAISMFEEMKKQGM--------------------------------KPDDVTFLGV 346
Query: 214 LPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVER 273
L A +G V + G + I+ C+ D A+ G + A K +++ + +
Sbjct: 347 LYACSHSGMVSEGLQYFDSMREYGIVS-GIKHYGCVTDLLARSGQLERAYKFIDELPI-K 404
Query: 274 KNLVSWTSIISGFAMHG---MGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEG 330
+ W +++S A HG MGK E + + ++ N C++ G EE
Sbjct: 405 PTAILWRTLLSACAGHGDVDMGKRVFERILELD----DSHGGDYVIFSNLCANTGRWEE- 459
Query: 331 LNFFDKMVEECEVLPDIKHYGC 352
+N K++ E V +K GC
Sbjct: 460 MNMVRKLMSEKGV---VKVPGC 478
>gi|125588235|gb|EAZ28899.1| hypothetical protein OsJ_12939 [Oryza sativa Japonica Group]
Length = 611
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 142/382 (37%), Positives = 217/382 (56%), Gaps = 37/382 (9%)
Query: 73 DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLF 132
D++T+ L++ CA+ G Q H V K G H YV L+NMY
Sbjct: 137 DTYTFVSLLKACASARAGEEGRQAHGVAVKAGAAEHEYVAPTLINMYA------------ 184
Query: 133 DEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALA 192
+ G++ AR +F+ M VVS+ +I R + EAL
Sbjct: 185 -------------------ECGDVRAARVMFDRMDGECVVSYNAMITASVRSSLPGEALV 225
Query: 193 LFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDT 252
LFR+M A + +P+ +T+++VL A G ++ + IH Y K + ++V LID
Sbjct: 226 LFREMQA-KGLKPTSVTLISVLSACALLGALELGRWIHDYIRKMRLDSL-VKVNTALIDM 283
Query: 253 YAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRV 312
YAKCG + A +F+D+ E ++ +W+ ++ +A HG G+EA+ F M+K G+KP+ V
Sbjct: 284 YAKCGSLEDAIGVFQDM--ESRDKQAWSVMMVAYANHGYGREAISMFEEMKKQGMKPDDV 341
Query: 313 TFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALG 372
TFL VL ACSH G+V EGL +FD M E ++ IKHYGC+ D+L R+G+LE+A K
Sbjct: 342 TFLGVLYACSHSGMVSEGLQYFDSM-REYGIVSGIKHYGCVTDLLARSGQLERAYKFIDE 400
Query: 373 IPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGD 432
+P + T ++WRTLL AC+ HG+V+MG+RV +ILE++ +GGDYV+ N+ A GR+ +
Sbjct: 401 LPIKPT-AILWRTLLSACAGHGDVDMGKRVFERILELDDSHGGDYVIFSNLCANTGRWEE 459
Query: 433 AERLRRVMDERNAFKVPGCSLV 454
+R++M E+ KVPGCS +
Sbjct: 460 MNMVRKLMSEKGVVKVPGCSSI 481
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 79/322 (24%), Positives = 134/322 (41%), Gaps = 53/322 (16%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+N ++ + P +A +L++++Q L P S T ++ CA L LG
Sbjct: 207 YNAMITASVRSSLPGEALVLFREMQA------KGLKP--TSVTLISVLSACALLGALELG 258
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
+H I K+ S V VNTAL++MY G L+D+ +F +M R+ W+VM+
Sbjct: 259 RWIHDYIRKMRLDSLVKVNTALIDMYAKCGSLEDAIGVFQDMESRDKQAWSVMMVAYANH 318
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
G A S+FEEM + + +P ++T L V
Sbjct: 319 GYGREAISMFEEMKKQGM--------------------------------KPDDVTFLGV 346
Query: 214 LPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVER 273
L A +G V + G + I+ C+ D A+ G + A K +++ + +
Sbjct: 347 LYACSHSGMVSEGLQYFDSMREYGIVS-GIKHYGCVTDLLARSGQLERAYKFIDELPI-K 404
Query: 274 KNLVSWTSIISGFAMHG---MGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEG 330
+ W +++S A HG MGK E + + ++ N C++ G EE
Sbjct: 405 PTAILWRTLLSACAGHGDVDMGKRVFERILELD----DSHGGDYVIFSNLCANTGRWEE- 459
Query: 331 LNFFDKMVEECEVLPDIKHYGC 352
+N K++ E V +K GC
Sbjct: 460 MNMVRKLMSEKGV---VKVPGC 478
>gi|147791850|emb|CAN61826.1| hypothetical protein VITISV_027628 [Vitis vinifera]
Length = 688
Score = 256 bits (653), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 166/475 (34%), Positives = 255/475 (53%), Gaps = 70/475 (14%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNL 92
++N+L+ YS ++ P A LL++++ S L P + FT F+++ C S
Sbjct: 181 MYNSLIRGYSNSDDPIDAVLLFRRM------ICSGLSP--NEFTLPFVLKACGCKSAYWE 232
Query: 93 GTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMI--TGL 150
+H + K+G S V+V AL+ +YV G + + KLFD++ ++ LV+WN MI TG+
Sbjct: 233 AVLVHGLAIKLGIGSLVFVQNALIAVYVVCGLIHCARKLFDDITDKTLVSWNSMIEITGV 292
Query: 151 -----------------------------------VKW----------GELEFARSLFEE 165
V W G +E AR +F++
Sbjct: 293 KIDIIVRNALXDMYAKCGNLHSAQAIFDRTQEKNVVSWTSMISAYAQHGSIEVARQIFDQ 352
Query: 166 MPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKS 225
MP +NVVSW +I Y R + EAL LF KM P E T++++L A Q GD+
Sbjct: 353 MPGKNVVSWNSMISCYLREGQYREALDLFNKMRNSRVV-PDEATLVSILAACSQLGDLVM 411
Query: 226 CQLIHGYG-EKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIIS 284
+ IH Y +G A+ + + N LID YAKCG + +A +F + + KNLVSW II
Sbjct: 412 GKKIHNYILSNKG--AYGVTLYNSLIDMYAKCGPVVTALDIF--LEMPGKNLVSWNVIIG 467
Query: 285 GFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVL 344
A+HG G EA++ F MQ G P+ +T +L+ACSH GLV+ GL +FD+M V
Sbjct: 468 ALALHGCGLEAIKLFEEMQADGTLPDEITLTGLLSACSHSGLVDMGLYYFDRMGVIYRVX 527
Query: 345 PDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTR 404
+I+HY C++D+LGR G L +A + +P + DVVVW LLGAC HGNVE+G+++ +
Sbjct: 528 REIEHYACMVDLLGRGGLLGEAIELIGRMPMK-PDVVVWGALLGACRIHGNVEIGKQILK 586
Query: 405 KILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDER--------NAFKVPGC 451
++LE+E GG YVL+ NI R+ D +++R++M +R ++ ++ GC
Sbjct: 587 QLLELEPHSGGLYVLISNIYWEAQRWEDVKKIRKLMIDRGIKKGRAISSIEIDGC 641
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/293 (28%), Positives = 142/293 (48%), Gaps = 42/293 (14%)
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
G+L++A+ +F+++P N + +I GY+ + +A+ LFR+M+ C P+E T+ V
Sbjct: 162 GDLQYAQRMFDQIPQPNKFMYNSLIRGYSNSDDPIDAVLLFRRMI-CSGLSPNEFTLPFV 220
Query: 214 LPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVER 273
L A L+HG K G + + V N LI Y CG I A KLF+DI+
Sbjct: 221 LKACGCKSAYWEAVLVHGLAIKLGIGSL-VFVQNALIAVYVVCGLIHCARKLFDDIT--D 277
Query: 274 KNLVSWTSI--ISGFAMHGMGKEAVEN--------------FGRMQKVGLKPNRVTFLSV 317
K LVSW S+ I+G + + + A+ + F R Q + N V++ S+
Sbjct: 278 KTLVSWNSMIEITGVKIDIIVRNALXDMYAKCGNLHSAQAIFDRTQ----EKNVVSWTSM 333
Query: 318 LNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQA------EKTAL 371
++A + G +E FD+M + ++ + +I R G+ +A + +
Sbjct: 334 ISAYAQHGSIEVARQIFDQMPGK-----NVVSWNSMISCYLREGQYREALDLFNKMRNSR 388
Query: 372 GIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNIL 424
+P E T V ++L ACS G++ MG+++ IL + YG V +YN L
Sbjct: 389 VVPDEATLV----SILAACSQLGDLVMGKKIHNYILSNKGAYG---VTLYNSL 434
>gi|145335149|ref|NP_172066.3| protein pigment defective 247 [Arabidopsis thaliana]
gi|75191933|sp|Q9MA50.1|PPR13_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g05750, chloroplastic; AltName: Full=Protein PIGMENT
DEFECTIVE 247; Flags: Precursor
gi|6850304|gb|AAF29381.1|AC009999_1 Contains similarity to a hypothetical protein from Arabidopsis
thaliana gb|AC007109.6, and contains two DUF17 PF|01535
domains [Arabidopsis thaliana]
gi|62320576|dbj|BAD95203.1| hypothetical protein [Arabidopsis thaliana]
gi|332189766|gb|AEE27887.1| protein pigment defective 247 [Arabidopsis thaliana]
Length = 500
Score = 256 bits (653), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 143/384 (37%), Positives = 223/384 (58%), Gaps = 9/384 (2%)
Query: 75 FTYSFLIRTCATLSHPN--LGTQLHAVISKVGF-QSHVYVNTALVNMYVSLGFLKDSSKL 131
T+ L+ C + + LG LH K+G ++HV V TA++ MY G K + +
Sbjct: 72 ITFIALLSGCGDFTSGSEALGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLV 131
Query: 132 FDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEAL 191
FD M ++N VTWN MI G ++ G+++ A +F++MP R+++SWT +I+G+ + EAL
Sbjct: 132 FDYMEDKNSVTWNTMIDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEAL 191
Query: 192 ALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLID 251
FR+M +P + I+A L A G + +H Y + F ++RV N LID
Sbjct: 192 LWFREM-QISGVKPDYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKN-NVRVSNSLID 249
Query: 252 TYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNR 311
Y +CGC+ A ++F ++ E++ +VSW S+I GFA +G E++ F +MQ+ G KP+
Sbjct: 250 LYCRCGCVEFARQVFYNM--EKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDA 307
Query: 312 VTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTAL 371
VTF L ACSH GLVEEGL +F M + + P I+HYGCL+D+ RAGRLE A K
Sbjct: 308 VTFTGALTACSHVGLVEEGLRYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQ 367
Query: 372 GIPSEITDVVVWRTLLGACSFHG-NVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRF 430
+P + +VV+ +LL ACS HG N+ + ER+ + + ++ +YV++ N+ A G++
Sbjct: 368 SMPMKPNEVVI-GSLLAACSNHGNNIVLAERLMKHLTDLNVKSHSNYVILSNMYAADGKW 426
Query: 431 GDAERLRRVMDERNAFKVPGCSLV 454
A ++RR M K PG S +
Sbjct: 427 EGASKMRRKMKGLGLKKQPGFSSI 450
Score = 45.1 bits (105), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 63/139 (45%), Gaps = 10/139 (7%)
Query: 277 VSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDK 336
VSWTS I+ +G EA + F M G++PN +TF+++L+ C G G
Sbjct: 37 VSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGC---GDFTSGSEALGD 93
Query: 337 MVE--ECEVLPDIKHY---GCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACS 391
++ C++ D H +I M + GR ++A + E + V W T++
Sbjct: 94 LLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYM--EDKNSVTWNTMIDGYM 151
Query: 392 FHGNVEMGERVTRKILEME 410
G V+ ++ K+ E +
Sbjct: 152 RSGQVDNAAKMFDKMPERD 170
>gi|297817620|ref|XP_002876693.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297322531|gb|EFH52952.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 572
Score = 256 bits (653), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 140/404 (34%), Positives = 228/404 (56%), Gaps = 17/404 (4%)
Query: 65 HSPLPPLF---------DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTAL 115
HSP+ F D T+ FL+ + H LG + HA I G +V T+L
Sbjct: 43 HSPISVYFRMRHHCVSPDFHTFPFLLPSFHNPIHLPLGQRTHAQILLFGLDKDPFVRTSL 102
Query: 116 VNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWT 175
+NMY S G L + ++FDE ++L WN ++ K G + AR LF+EMP RNV+SW+
Sbjct: 103 LNMYSSCGDLSSALRIFDESVSKDLPAWNSVVNAYAKAGLINHARKLFDEMPERNVISWS 162
Query: 176 GIIDGYTRMNRSNEALALFRKMVACE----YTEPSEITILAVLPAIWQNGDVKSCQLIHG 231
+I+GY + EAL LFR+M + + P++ T+ VL A + G ++ + +H
Sbjct: 163 CLINGYVMCGKYKEALDLFREMQLPKPNEVFVSPNKFTMSTVLSACGRLGALEQGKWVHS 222
Query: 232 YGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGM 291
Y +K G DI + LID YAKCG + A ++F+ + +K++ +++++I AM+G+
Sbjct: 223 YIDKYG-VEIDIVLGTALIDMYAKCGSLERAKRVFDALG-SKKDVKAYSAMICCLAMYGL 280
Query: 292 GKEAVENFGRMQKV-GLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHY 350
E + F M + PN VTF+ +L AC H GL+ +G ++F M EE + P I+HY
Sbjct: 281 TDECFQVFSEMTTSNNINPNSVTFVGILGACVHRGLINKGKSYFKMMTEEFGITPSIQHY 340
Query: 351 GCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEME 410
GC++D+ GR+G +++AE +P E DV++W +LL G+++ E ++++E++
Sbjct: 341 GCMVDLYGRSGLIKEAESFIASMPME-PDVLIWGSLLSGSRMLGDIKTCEGALKRLIELD 399
Query: 411 RGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
G YVL+ N+ A GR+ + +R+R M+ + KVPGCS V
Sbjct: 400 PMNSGAYVLLSNVYAKTGRWIEVKRIRHEMEVKGIKKVPGCSYV 443
>gi|186478293|ref|NP_172391.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75099767|sp|O80488.1|PPR23_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09190
gi|3249103|gb|AAC24086.1| Contains similarity to membrane-associated salt-inducible protein
homolog TM021B04.10 gb|2191192 from A. thaliana BAC
gb|AF007271 [Arabidopsis thaliana]
gi|28393182|gb|AAO42022.1| unknown protein [Arabidopsis thaliana]
gi|332190289|gb|AEE28410.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 484
Score = 256 bits (653), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 148/452 (32%), Positives = 247/452 (54%), Gaps = 22/452 (4%)
Query: 4 LQNSQTPNNITTQIHSHLLTTNSLLHHSQLFNTLLHFYSLAESPQKAFLLYKQLQQIYTH 63
L NS N ++ SH+ N L+ FN ++ YSL P ++ + ++
Sbjct: 49 LSNSDYAN----RVFSHIQNPNVLV-----FNAMIKCYSLVGPPLESLSFFSSMKSRGIW 99
Query: 64 SHSPLPPLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLG 123
+ D +TY+ L+++C++LS G +H + + GF + +V +Y S G
Sbjct: 100 A--------DEYTYAPLLKSCSSLSDLRFGKCVHGELIRTGFHRLGKIRIGVVELYTSGG 151
Query: 124 FLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTR 183
+ D+ K+FDEM ERN+V WN+MI G G++E LF++M R++VSW +I ++
Sbjct: 152 RMGDAQKVFDEMSERNVVVWNLMIRGFCDSGDVERGLHLFKQMSERSIVSWNSMISSLSK 211
Query: 184 MNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDI 243
R EAL LF +M+ + +P E T++ VLP G + + + IH E G I
Sbjct: 212 CGRDREALELFCEMIDQGF-DPDEATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFI 270
Query: 244 RVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQ 303
V N L+D Y K G + +A+ +F + +R+N+VSW ++ISG A++G G+ ++ F M
Sbjct: 271 TVGNALVDFYCKSGDLEAATAIFRKM--QRRNVVSWNTLISGSAVNGKGEFGIDLFDAMI 328
Query: 304 KVG-LKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGR 362
+ G + PN TFL VL CS+ G VE G F M+E ++ +HYG ++D++ R+GR
Sbjct: 329 EEGKVAPNEATFLGVLACCSYTGQVERGEELFGLMMERFKLEARTEHYGAMVDLMSRSGR 388
Query: 363 LEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYN 422
+ +A K +P + +W +LL AC HG+V++ E +++++E G G+YVL+ N
Sbjct: 389 ITEAFKFLKNMPVN-ANAAMWGSLLSACRSHGDVKLAEVAAMELVKIEPGNSGNYVLLSN 447
Query: 423 ILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
+ A GR+ D E++R +M + K G S +
Sbjct: 448 LYAEEGRWQDVEKVRTLMKKNRLRKSTGQSTI 479
>gi|297800176|ref|XP_002867972.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297313808|gb|EFH44231.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 535
Score = 256 bits (653), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 139/452 (30%), Positives = 240/452 (53%), Gaps = 45/452 (9%)
Query: 35 NTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLF-DSFTYSFLIRTCATLSHPNLG 93
N+++ Y+ + +P+ A +++++ L P+F D ++++F+++ CA G
Sbjct: 79 NSVIRAYANSSTPEIALTVFREML---------LGPVFPDKYSFTFVLKACAAFCGFEEG 129
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
Q+H + K + V+V L+N+Y G+ + + K+ D MP R+ V+WN +++ +
Sbjct: 130 RQIHGLFMKSDLVTDVFVENTLINVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLDK 189
Query: 154 GELEFARSLFEE-------------------------------MPCRNVVSWTGIIDGYT 182
G +E AR+LF+E MP ++VVSW ++ Y
Sbjct: 190 GLVEEARALFDEMEERNVESWNFMISGYAAAGLVKEAREVFDSMPVKDVVSWNAMVTAYA 249
Query: 183 RMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFD 242
+ NE L +F M+ P T++ VL A G + + +H Y +K G +
Sbjct: 250 HVGCYNEVLEVFNMMLDDSAERPDGFTLVNVLSACASLGSLSQGEWVHVYIDKHGIE-IE 308
Query: 243 IRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRM 302
V L+D Y+KCG I A ++F D S ++++ +W SII+G ++HG+GK+A+E F M
Sbjct: 309 GFVATALVDMYSKCGKIDKALEVFRDTS--KRDVSTWNSIITGLSVHGLGKDALEIFSEM 366
Query: 303 QKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGR 362
G KPN +TF+ VL+AC+H GL+++ F+ M + P I+HYGC++D+LGR G+
Sbjct: 367 VYEGFKPNGITFIGVLSACNHVGLLDQARKLFEMMNSVYGIEPTIEHYGCMVDLLGRMGK 426
Query: 363 LEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYN 422
E+AE+ +P++ +++ +LLGAC G +E ER+ ++LE YV M N
Sbjct: 427 FEEAEELVNEVPADEASILL-ESLLGACKRFGKLEQAERIANRLLESNPRESSGYVQMSN 485
Query: 423 ILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
+ A GR+ +A +R M K PGCS++
Sbjct: 486 LYASHGRWDEAMEVRGKMRAERVKKNPGCSMI 517
Score = 43.1 bits (100), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 59/127 (46%), Gaps = 3/127 (2%)
Query: 271 VERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEG 330
+E N + S+I +A + A+ F M + P++ +F VL AC+ EEG
Sbjct: 70 IESPNGFTHNSVIRAYANSSTPEIALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEG 129
Query: 331 LNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGAC 390
+ + +++ D+ LI++ GR+G E A K +P + D V W +LL A
Sbjct: 130 RQIHG-LFMKSDLVTDVFVENTLINVYGRSGYFEIARKVLDRMP--VRDAVSWNSLLSAY 186
Query: 391 SFHGNVE 397
G VE
Sbjct: 187 LDKGLVE 193
>gi|115456858|ref|NP_001052029.1| Os04g0110500 [Oryza sativa Japonica Group]
gi|38345581|emb|CAE01779.2| OSJNBa0027H06.17 [Oryza sativa Japonica Group]
gi|113563600|dbj|BAF13943.1| Os04g0110500 [Oryza sativa Japonica Group]
gi|125589117|gb|EAZ29467.1| hypothetical protein OsJ_13541 [Oryza sativa Japonica Group]
gi|215736988|dbj|BAG95917.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 531
Score = 256 bits (653), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 136/366 (37%), Positives = 210/366 (57%), Gaps = 5/366 (1%)
Query: 91 NLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGL 150
N G ++HA+I G + V+V+T L+ +Y G L S ++FD+MP R+ +TWN M+
Sbjct: 133 NPGKKIHALIVTSGIEPDVFVSTELIRVYGECGKLAVSRRVFDDMPSRSTITWNAMLHQY 192
Query: 151 VKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACE--YTEPSEI 208
+ G+++ A LF MP R+VVSW ++ GY R EAL LFR+MV+ P+
Sbjct: 193 ARHGKVDTAYELFLAMPRRDVVSWNTVMAGYCVAGRCREALGLFRQMVSPSSCAVHPNVP 252
Query: 209 TILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFED 268
T+ +L A G +++ +H Y E+ D + CLID Y KCG I +A ++FE
Sbjct: 253 TMSTILGACAGAGCLETGIWVHAYIERNRMND-DGYLDRCLIDMYCKCGSIDNALQVFEK 311
Query: 269 ISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVE 328
+ +++L SWT++I G AMHG +A+ F MQ G+ P+ VT + VLNAC+HGGLV+
Sbjct: 312 -APRKRDLFSWTTVICGLAMHGRATDALRMFDMMQDNGICPDDVTLVGVLNACAHGGLVD 370
Query: 329 EGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLG 388
EGL +F M + + P I+HYGC+ID+LGR GRL++A +P + + V+W L
Sbjct: 371 EGLGYFYSMEAKFRITPKIEHYGCMIDLLGRVGRLQEAYSMIRTMPMD-PNTVIWGAFLS 429
Query: 389 ACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKV 448
AC HGN+E+G+ ++ ++ V++ ++ A + R RR M+ K
Sbjct: 430 ACKVHGNMELGKIAAEELTRLDPDDPWGRVMLSSMYAKAQDWIGLARERREMNSMQVKKT 489
Query: 449 PGCSLV 454
PGCS +
Sbjct: 490 PGCSSI 495
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 86/326 (26%), Positives = 148/326 (45%), Gaps = 42/326 (12%)
Query: 93 GTQLHAVISKVGF-QSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLV 151
+ +H ++ K G ++ TAL++ Y +LG + +LFDEMPE+ LV M V
Sbjct: 29 ASSIHCLLLKAGLLHVGAHLPTALLSAYAALGSPDHARRLFDEMPEQGLVPRTAMARAHV 88
Query: 152 KWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVAC--------EYT 203
G+ A ++F +M + DG N +AL + AC
Sbjct: 89 ASGQAAQAIAVFGDM----------VADGVFPDN-----VALAVALGACHGAGSWTARRN 133
Query: 204 EPSEITILAVLPAIWQNGDVKSCQLIHGYGE-------KRGFTAFDIR---VLNCLIDTY 253
+I L V I + V S +LI YGE +R F R N ++ Y
Sbjct: 134 PGKKIHALIVTSGIEPDVFV-STELIRVYGECGKLAVSRRVFDDMPSRSTITWNAMLHQY 192
Query: 254 AKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRM---QKVGLKPN 310
A+ G + +A +LF +++ R+++VSW ++++G+ + G +EA+ F +M + PN
Sbjct: 193 ARHGKVDTAYELF--LAMPRRDVVSWNTVMAGYCVAGRCREALGLFRQMVSPSSCAVHPN 250
Query: 311 RVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTA 370
T ++L AC+ G +E G+ + +E + D CLIDM + G ++ A +
Sbjct: 251 VPTMSTILGACAGAGCLETGI-WVHAYIERNRMNDDGYLDRCLIDMYCKCGSIDNALQVF 309
Query: 371 LGIPSEITDVVVWRTLLGACSFHGNV 396
P + D+ W T++ + HG
Sbjct: 310 EKAPRK-RDLFSWTTVICGLAMHGRA 334
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/278 (22%), Positives = 112/278 (40%), Gaps = 50/278 (17%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+NT++ Y +A ++A L++Q+ + + P P T S ++ CA G
Sbjct: 216 WNTVMAGYCVAGRCREALGLFRQMVSPSSCAVHPNVP-----TMSTILGACAGAGCLETG 270
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMP-ERNLVTWNVMITGLVK 152
+HA I + Y++ L++MY G + ++ ++F++ P +R+L +W +I GL
Sbjct: 271 IWVHAYIERNRMNDDGYLDRCLIDMYCKCGSIDNALQVFEKAPRKRDLFSWTTVICGLAM 330
Query: 153 WGELEFARSLFEEMP----CRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEI 208
G A +F+ M C + V+ G+++ +E L F M A P
Sbjct: 331 HGRATDALRMFDMMQDNGICPDDVTLVGVLNACAHGGLVDEGLGYFYSMEAKFRITPK-- 388
Query: 209 TILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFED 268
I YG C+ID + G + A +
Sbjct: 389 --------------------IEHYG--------------CMIDLLGRVGRLQEAYSMIRT 414
Query: 269 ISVERKNLVSWTSIISGFAMHG---MGKEAVENFGRMQ 303
+ ++ N V W + +S +HG +GK A E R+
Sbjct: 415 MPMD-PNTVIWGAFLSACKVHGNMELGKIAAEELTRLD 451
>gi|449480302|ref|XP_004155856.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 654
Score = 255 bits (652), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 143/422 (33%), Positives = 236/422 (55%), Gaps = 43/422 (10%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNL 92
++ +++ Y P +A LLYK++++ SP D T + L+ CA L +
Sbjct: 147 VWTSMISGYMKNHCPNEALLLYKKMEE---DGFSP-----DEVTMATLVSACAELKDLGV 198
Query: 93 GTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVK 152
G +LH+ I ++ + + +ALVNMY K
Sbjct: 199 GMKLHSHIREMDMKICAVLGSALVNMYA-------------------------------K 227
Query: 153 WGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILA 212
G+L+ AR +F+++ ++V +W+ +I GY + NRS EAL LFR++ P+E+TILA
Sbjct: 228 CGDLKTARQVFDQLSDKDVYAWSALIFGYVKNNRSTEALQLFREVAGGSNMRPNEVTILA 287
Query: 213 VLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVE 272
V+ A Q GD+++ + +H Y R + + N LID ++KCG I +A ++F+ +S
Sbjct: 288 VISACAQLGDLETGRWVHDY-ITRTQKGHSVSLNNSLIDMFSKCGDIDAAKRIFDSMSY- 345
Query: 273 RKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLN 332
K+L+SW S+++G A+HG+G+EA+ F MQ L+P+ +TF+ VL ACSH GLV+EG
Sbjct: 346 -KDLISWNSMVNGLALHGLGREALAQFHLMQTTDLQPDEITFIGVLTACSHAGLVQEGKK 404
Query: 333 FFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSF 392
F ++ V +HYGC++D+L RAG L +A + +P + D +W ++LGAC
Sbjct: 405 LFYEIEALYGVRLKSEHYGCMVDLLCRAGLLAEAREFIRVMPLQ-PDGAIWGSMLGACRV 463
Query: 393 HGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCS 452
+ N+E+GE R +LE+E G Y+L+ NI A + + +++R +M+E+ K PGCS
Sbjct: 464 YNNLELGEEAARCLLELEPTNDGVYILLSNIYARRKMWNEVKKVRELMNEKGIQKTPGCS 523
Query: 453 LV 454
V
Sbjct: 524 SV 525
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 90/366 (24%), Positives = 171/366 (46%), Gaps = 54/366 (14%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+N++L + + P++A Q YT + D FT+ L++ CA L +G
Sbjct: 46 WNSMLRAFVNSNMPRRAL-------QSYTEMLERSRNVPDRFTFPSLLKGCALLLEFKVG 98
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
LH + K S +Y+ T L+NMY + G LK + LF+ M RN V W
Sbjct: 99 KVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHRNKVVW---------- 148
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
T +I GY + + NEAL L++KM ++ P E+T+ +
Sbjct: 149 ---------------------TSMISGYMKNHCPNEALLLYKKMEEDGFS-PDEVTMATL 186
Query: 214 LPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVL----NCLIDTYAKCGCIFSASKLFEDI 269
+ A + D+ +H + D+++ + L++ YAKCG + +A ++F+ +
Sbjct: 187 VSACAELKDLGVGMKLHSH-----IREMDMKICAVLGSALVNMYAKCGDLKTARQVFDQL 241
Query: 270 SVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQ-KVGLKPNRVTFLSVLNACSHGGLVE 328
S K++ +W+++I G+ + EA++ F + ++PN VT L+V++AC+ G +E
Sbjct: 242 S--DKDVYAWSALIFGYVKNNRSTEALQLFREVAGGSNMRPNEVTILAVISACAQLGDLE 299
Query: 329 EGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLG 388
G + + + + LIDM + G ++ A++ + + D++ W +++
Sbjct: 300 TG-RWVHDYITRTQKGHSVSLNNSLIDMFSKCGDIDAAKRIFDSMSYK--DLISWNSMVN 356
Query: 389 ACSFHG 394
+ HG
Sbjct: 357 GLALHG 362
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 75/309 (24%), Positives = 136/309 (44%), Gaps = 27/309 (8%)
Query: 144 NVMITGLVKWGELE--FARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACE 201
N +I ++ G L +A S+F +V++W ++ + N AL + +M+
Sbjct: 14 NKLIAHVLSMGSLGVGYAYSVFAHTRVLDVLTWNSMLRAFVNSNMPRRALQSYTEMLERS 73
Query: 202 YTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFS 261
P T ++L + K +++HG K + D+ + L++ YA CG + S
Sbjct: 74 RNVPDRFTFPSLLKGCALLLEFKVGKVLHGQVVKYMLHS-DLYIETTLLNMYAACGDLKS 132
Query: 262 ASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNAC 321
A LFE + +N V WTS+ISG+ + EA+ + +M++ G P+ VT ++++AC
Sbjct: 133 ARFLFERMG--HRNKVVWTSMISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSAC 190
Query: 322 SHGGLVEEGLNFFDKMVEE----CEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEI 377
+ + G+ + E C VL L++M + G L+ A + + +
Sbjct: 191 AELKDLGVGMKLHSHIREMDMKICAVLG-----SALVNMYAKCGDLKTARQVFDQLSDK- 244
Query: 378 TDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGG-----DYVLMYNILAGVGRFGD 432
DV W L+ G V+ R T + GG + V + +++ + GD
Sbjct: 245 -DVYAWSALI-----FGYVK-NNRSTEALQLFREVAGGSNMRPNEVTILAVISACAQLGD 297
Query: 433 AERLRRVMD 441
E R V D
Sbjct: 298 LETGRWVHD 306
>gi|414871822|tpg|DAA50379.1| TPA: hypothetical protein ZEAMMB73_401482 [Zea mays]
Length = 522
Score = 255 bits (652), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 147/431 (34%), Positives = 219/431 (50%), Gaps = 16/431 (3%)
Query: 29 HHSQ----LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTC 84
HH + ++NT++ S P A L+ + SP PP D ++ L+
Sbjct: 92 HHPRPNSFMWNTVIRALSDGARPDAAVALFVDMLS------SPTPP--DRRSFPSLLAAY 143
Query: 85 ATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWN 144
A L G LH + K+G YV A + MY S G ++ LF + PE ++V N
Sbjct: 144 ARLGRAGDGEALHGMALKLGLAGDAYVRNATIAMYASCGRADEALALFGQCPELDVVACN 203
Query: 145 VMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTE 204
+I L + G ++ ARS+F+ MP R V +W+ ++ Y R R +EALALF M A + E
Sbjct: 204 SVIVALARAGRVDEARSVFDAMPERTVATWSAMVSAYARAARCSEALALFSAMQA-DGME 262
Query: 205 PSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASK 264
P+ +++VL G + +H Y ++ G A + V+ L+D Y KCG + A +
Sbjct: 263 PNANVLVSVLGCCASLGALVQGAWVHEYIDRHG-VAMNALVVTALVDMYCKCGSVDDARQ 321
Query: 265 LFEDISVER-KNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSH 323
+F+ + L SW S++ G A+HG +EAV F ++ GL P+ VTF++VL A H
Sbjct: 322 VFDAARSQGLAKLSSWNSMMQGLAVHGQWREAVALFSELKSYGLSPDNVTFIAVLTAYGH 381
Query: 324 GGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVW 383
G+ +E F M E V P I+HYGCL+D L RAGRL +AE +P D +W
Sbjct: 382 SGMPDEAQAAFASMSSEHGVEPGIEHYGCLVDALARAGRLREAEDAIRAMPMA-PDAAIW 440
Query: 384 RTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDER 443
LL C HG+ E+G R R+ + + G YVL ++LA G G +R M E
Sbjct: 441 GALLSGCRLHGDAELGARAAREAVRCDPRDSGAYVLAASVLARGGDPGRGAGIRGRMREA 500
Query: 444 NAFKVPGCSLV 454
KVPG S++
Sbjct: 501 GVGKVPGSSMI 511
>gi|356530245|ref|XP_003533693.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35030,
mitochondrial-like [Glycine max]
Length = 581
Score = 255 bits (651), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 133/341 (39%), Positives = 204/341 (59%), Gaps = 2/341 (0%)
Query: 114 ALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVS 173
A++ Y L ++ +LF MPER++ +WN MITG ++ GEL A LF EM +NV++
Sbjct: 193 AMITGYAQNRRLDEALQLFQRMPERDMPSWNTMITGFIQNGELNRAEKLFGEMQEKNVIT 252
Query: 174 WTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYG 233
WT ++ GY + S EAL +F KM+A +P+ T + VL A + Q IH
Sbjct: 253 WTAMMTGYVQHGLSEEALRVFIKMLATNELKPNTGTFVTVLGACSDLAGLTEGQQIHQMI 312
Query: 234 EKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGK 293
K F V++ LI+ Y+KCG + +A K+F+D + +++L+SW +I+ +A HG GK
Sbjct: 313 SKTVFQDSTC-VVSALINMYSKCGELHTARKMFDDGLLSQRDLISWNGMIAAYAHHGYGK 371
Query: 294 EAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCL 353
EA+ F MQ++G+ N VTF+ +L ACSH GLVEEG +FD++++ + HY CL
Sbjct: 372 EAINLFNEMQELGVCANDVTFVGLLTACSHTGLVEEGFKYFDEILKNRSIQLREDHYACL 431
Query: 354 IDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGY 413
+D+ GRAGRL++A G+ E+ + VW LL C+ HGN ++G+ V KIL++E
Sbjct: 432 VDLCGRAGRLKEASNIIEGLGEEVP-LTVWGALLAGCNVHGNADIGKLVAEKILKIEPQN 490
Query: 414 GGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
G Y L+ N+ A VG++ +A +R M + K PGCS +
Sbjct: 491 AGTYSLLSNMYASVGKWKEAANVRMRMKDMGLKKQPGCSWI 531
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 92/317 (29%), Positives = 154/317 (48%), Gaps = 37/317 (11%)
Query: 106 QSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEE 165
+ +V TA+VN Y+ +K++ +LF EMP RN+V+WN M+ G + G + A LF
Sbjct: 61 KKNVVTWTAMVNGYIKFNQVKEAERLFYEMPLRNVVSWNTMVDGYARNGLTQQALDLFRR 120
Query: 166 MPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKS 225
MP RNVVSW II + R +A LF +M + ++ ++ + +NG V+
Sbjct: 121 MPERNVVSWNTIITALVQCGRIEDAQRLFDQM-----KDRDVVSWTTMVAGLAKNGRVED 175
Query: 226 CQ----------------LIHGYGEKRGFTAF----------DIRVLNCLIDTYAKCGCI 259
+ +I GY + R D+ N +I + + G +
Sbjct: 176 ARALFDQMPVRNVVSWNAMITGYAQNRRLDEALQLFQRMPERDMPSWNTMITGFIQNGEL 235
Query: 260 FSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVG-LKPNRVTFLSVL 318
A KLF ++ + KN+++WT++++G+ HG+ +EA+ F +M LKPN TF++VL
Sbjct: 236 NRAEKLFGEM--QEKNVITWTAMMTGYVQHGLSEEALRVFIKMLATNELKPNTGTFVTVL 293
Query: 319 NACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKT-ALGIPSEI 377
ACS + EG +M+ + LI+M + G L A K G+ S+
Sbjct: 294 GACSDLAGLTEGQQIH-QMISKTVFQDSTCVVSALINMYSKCGELHTARKMFDDGLLSQ- 351
Query: 378 TDVVVWRTLLGACSFHG 394
D++ W ++ A + HG
Sbjct: 352 RDLISWNGMIAAYAHHG 368
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 135/291 (46%), Gaps = 45/291 (15%)
Query: 144 NVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYT 203
N+ I+ L + GE+++AR +FEEMP R++ WT +I GY + EA LF + A
Sbjct: 5 NLFISRLCREGEIDYARKVFEEMPERDIGLWTTMITGYLKCGMIREARKLFDRWDA---- 60
Query: 204 EPSEITILAVLPAIWQNGDVKSCQ----------------LIHGYGEKRGFT--AFD--- 242
+ + +T A++ + VK + ++ GY + G T A D
Sbjct: 61 KKNVVTWTAMVNGYIKFNQVKEAERLFYEMPLRNVVSWNTMVDGYA-RNGLTQQALDLFR 119
Query: 243 ------IRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAV 296
+ N +I +CG I A +LF+ ++ +++VSWT++++G A +G ++A
Sbjct: 120 RMPERNVVSWNTIITALVQCGRIEDAQRLFD--QMKDRDVVSWTTMVAGLAKNGRVEDAR 177
Query: 297 ENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDM 356
F +M N V++ +++ + ++E L F +M E D+ + +I
Sbjct: 178 ALFDQMP----VRNVVSWNAMITGYAQNRRLDEALQLFQRMPER-----DMPSWNTMITG 228
Query: 357 LGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKIL 407
+ G L +AEK G E +V+ W ++ HG E RV K+L
Sbjct: 229 FIQNGELNRAEKL-FGEMQE-KNVITWTAMMTGYVQHGLSEEALRVFIKML 277
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 114/240 (47%), Gaps = 11/240 (4%)
Query: 76 TYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDE- 134
T+ ++ C+ L+ G Q+H +ISK FQ V +AL+NMY G L + K+FD+
Sbjct: 288 TFVTVLGACSDLAGLTEGQQIHQMISKTVFQDSTCVVSALINMYSKCGELHTARKMFDDG 347
Query: 135 -MPERNLVTWNVMITGLVKWGELEFARSLFEEMP----CRNVVSWTGIIDGYTRMNRSNE 189
+ +R+L++WN MI G + A +LF EM C N V++ G++ + E
Sbjct: 348 LLSQRDLISWNGMIAAYAHHGYGKEAINLFNEMQELGVCANDVTFVGLLTACSHTGLVEE 407
Query: 190 ALALFRKMVACEYTEPSEITILAVLPAIWQNGDVK-SCQLIHGYGEKRGFTAFDIRVLNC 248
F +++ + E ++ + G +K + +I G GE+ T + + C
Sbjct: 408 GFKYFDEILKNRSIQLREDHYACLVDLCGRAGRLKEASNIIEGLGEEVPLTVWGALLAGC 467
Query: 249 LIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLK 308
+ A G + + L +E +N +++ + + +A G KEA RM+ +GLK
Sbjct: 468 NVHGNADIGKLVAEKIL----KIEPQNAGTYSLLSNMYASVGKWKEAANVRMRMKDMGLK 523
>gi|357480897|ref|XP_003610734.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512069|gb|AES93692.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 726
Score = 255 bits (651), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 134/389 (34%), Positives = 223/389 (57%), Gaps = 7/389 (1%)
Query: 66 SPLPPLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFL 125
S + P DS ++ C + + G +H + G+ ++ TAL+NMY + G +
Sbjct: 216 SDMKP--DSVILCTVLSACGHAGNLSYGRTIHEFVKDNGYAIDSHLQTALINMYANCGAM 273
Query: 126 KDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMN 185
+ K++D + ++L+ M++G K G ++ AR +F++M R++V W+ +I GY +
Sbjct: 274 DLARKIYDGLSSKHLIVSTAMLSGYAKLGMVKDARFIFDQMIERDLVCWSAMISGYAESD 333
Query: 186 RSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRV 245
+ EAL LF +M+ + + P +IT+L+V+ A G + IH Y ++ GF + V
Sbjct: 334 QPQEALKLFDEMLQ-KRSVPDQITMLSVISACSHVGALAQANWIHTYVDRSGF-GRALSV 391
Query: 246 LNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKV 305
N LID YAKCG + A ++FE++ RKN++SW+S+I+ FAMHG A++ F RM++V
Sbjct: 392 NNALIDMYAKCGNLVKAREVFENMP--RKNVISWSSMINAFAMHGNADSAIKLFRRMKEV 449
Query: 306 GLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQ 365
++PN VTF+ VL AC H GLVEEG F M+ E + P +HYGC++D+ RA L +
Sbjct: 450 NIEPNGVTFIGVLYACGHAGLVEEGEKLFSSMINEHGISPTREHYGCMVDLYCRANFLRK 509
Query: 366 AEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILA 425
A + +P +V++W +L+ AC HG E+GE +++LE+E + G V++ NI A
Sbjct: 510 AIELIETMPFA-PNVIIWGSLMSACQVHGEAELGEFAAKRLLELEPDHDGALVVLSNIYA 568
Query: 426 GVGRFGDAERLRRVMDERNAFKVPGCSLV 454
R+ D +R+ M + K S +
Sbjct: 569 KEKRWNDVGLIRKSMSYKGISKEKASSRI 597
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 109/434 (25%), Positives = 193/434 (44%), Gaps = 74/434 (17%)
Query: 30 HSQLFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSH 89
H+ N LL S + P+K LY L+ I + D F++ L++ + +S
Sbjct: 84 HTHFSNQLLRHLSRSSFPEKTIFLYHNLRAINAFA-------LDRFSFPSLLKAVSKVSA 136
Query: 90 PNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITG 149
N G ++H + SK+GF ++ T L+ MY S + D+ LFD+M + V WN++I G
Sbjct: 137 FNHGLEIHGLASKLGFVDDPFIQTGLIAMYASCRRIMDARLLFDKMCHPDAVAWNMIIDG 196
Query: 150 LVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEIT 209
+ G + A LFE+M RS++ +P +
Sbjct: 197 YCQNGHYDDALRLFEDM-------------------RSSD-------------MKPDSVI 224
Query: 210 ILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDI 269
+ VL A G++ + IH + + G+ A D + LI+ YA CG + A K+++ +
Sbjct: 225 LCTVLSACGHAGNLSYGRTIHEFVKDNGY-AIDSHLQTALINMYANCGAMDLARKIYDGL 283
Query: 270 SVE-----------------------------RKNLVSWTSIISGFAMHGMGKEAVENFG 300
S + ++LV W+++ISG+A +EA++ F
Sbjct: 284 SSKHLIVSTAMLSGYAKLGMVKDARFIFDQMIERDLVCWSAMISGYAESDQPQEALKLFD 343
Query: 301 RMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRA 360
M + P+++T LSV++ACSH G + + N+ V+ + LIDM +
Sbjct: 344 EMLQKRSVPDQITMLSVISACSHVGALAQA-NWIHTYVDRSGFGRALSVNNALIDMYAKC 402
Query: 361 GRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLM 420
G L +A + +P + +V+ W +++ A + HGN + ++ R++ E+ G V
Sbjct: 403 GNLVKAREVFENMPRK--NVISWSSMINAFAMHGNADSAIKLFRRMKEVNIEPNG--VTF 458
Query: 421 YNILAGVGRFGDAE 434
+L G G E
Sbjct: 459 IGVLYACGHAGLVE 472
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 93/214 (43%), Gaps = 12/214 (5%)
Query: 229 IHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAM 288
IHG K GF D + LI YA C I A LF+ + + V+W II G+
Sbjct: 143 IHGLASKLGFVD-DPFIQTGLIAMYASCRRIMDARLLFDKMC--HPDAVAWNMIIDGYCQ 199
Query: 289 HGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIK 348
+G +A+ F M+ +KP+ V +VL+AC H G + G + V++ D
Sbjct: 200 NGHYDDALRLFEDMRSSDMKPDSVILCTVLSACGHAGNLSYGRTIHE-FVKDNGYAIDSH 258
Query: 349 HYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILE 408
LI+M G ++ A K G+ S+ ++V +L + G V+ + +++E
Sbjct: 259 LQTALINMYANCGAMDLARKIYDGLSSK--HLIVSTAMLSGYAKLGMVKDARFIFDQMIE 316
Query: 409 MERGYGGDYVLMYNILAGVGRFGDAERLRRVMDE 442
D V +++G + ++ DE
Sbjct: 317 R------DLVCWSAMISGYAESDQPQEALKLFDE 344
>gi|449468660|ref|XP_004152039.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g06145-like [Cucumis sativus]
Length = 697
Score = 255 bits (651), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 143/427 (33%), Positives = 226/427 (52%), Gaps = 35/427 (8%)
Query: 59 QIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNM 118
Q Y H L S+T+S L++ C + LG +H I K GF+SH++V TALV+
Sbjct: 220 QCYVHMLEESNVLPTSYTFSSLVKACTFMCAVELGQMVHCHIWKKGFESHLFVQTALVDF 279
Query: 119 YVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGII 178
Y L L ++ K+FDEM ER+ W M++ L + G+++ AR LFEEMP RN +W +I
Sbjct: 280 YSKLEILSEARKVFDEMCERDAFAWTAMVSALARVGDMDSARKLFEEMPERNTATWNTMI 339
Query: 179 DGYTRMNRSNEALALFRK-----------MVACE------------YTE-------PSEI 208
DGY R+ A LF + M+ C Y+E P E+
Sbjct: 340 DGYARLGNVESAELLFNQMPTKDIISWTTMITCYSQNKQYQDALAIYSEMRLNGIIPDEV 399
Query: 209 TILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFED 268
T+ V A G ++ + IH Y +G D+ + + L+D YAKCG + + +F
Sbjct: 400 TMSTVASACAHIGALELGKEIHHYVMSQGLN-LDVYIGSALVDMYAKCGSLDLSLLIF-- 456
Query: 269 ISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVE 328
+ KNL W ++I G A+HG ++A+ F M++ + PN VTF+S+L+AC+H GLV+
Sbjct: 457 FKLTDKNLYCWNAVIEGLAVHGYAEKALRMFAIMEREKIMPNGVTFISILSACTHAGLVD 516
Query: 329 EGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLG 388
EG + F M + ++ PDI+HYGC++DML ++G L +A + + E + ++W LL
Sbjct: 517 EGRSRFLSMTRDYDIRPDIRHYGCMVDMLSKSGYLNEALELIKSMEFE-PNSIIWGALLN 575
Query: 389 ACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNA-FK 447
C HGN E+ E +++ +E G Y L+ ++ A + + +R +M E+ K
Sbjct: 576 GCKLHGNCEIAEDAVEQLMILEPMNSGHYNLLVSMYAEEKDWMEVAHIRSMMKEKGVEKK 635
Query: 448 VPGCSLV 454
PG S +
Sbjct: 636 YPGSSWI 642
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 80/354 (22%), Positives = 150/354 (42%), Gaps = 67/354 (18%)
Query: 67 PL-PPLFDSFTYSFL--IRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLG 123
PL PP SF + L I+ C+T++ +LH + + + +++ + LV+ ++S
Sbjct: 126 PLQPPSCPSFKQTLLNRIKNCSTIN------ELHGLCASM-IKTNAIQDCFLVHQFISAS 178
Query: 124 FLKDSSKL----FDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIID 179
F +S F +M N+ +N MI G V G P R
Sbjct: 179 FALNSVHYPVFAFTQMENPNVFVYNAMIKGFVYCG-----------YPFR---------- 217
Query: 180 GYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFT 239
AL + M+ P+ T +++ A V+ Q++H + K+GF
Sbjct: 218 ----------ALQCYVHMLEESNVLPTSYTFSSLVKACTFMCAVELGQMVHCHIWKKGFE 267
Query: 240 AFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENF 299
+ + V L+D Y+K + A K+F+++ ++ +WT+++S A G A + F
Sbjct: 268 S-HLFVQTALVDFYSKLEILSEARKVFDEMC--ERDAFAWTAMVSALARVGDMDSARKLF 324
Query: 300 GRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGR 359
M + N T+ ++++ + G VE F++M + DI + +I +
Sbjct: 325 EEMP----ERNTATWNTMIDGYARLGNVESAELLFNQMPTK-----DIISWTTMITCYSQ 375
Query: 360 AGRLEQAEKTALGIPSE------ITDVVVWRTLLGACSFHGNVEMGERVTRKIL 407
+ + AL I SE I D V T+ AC+ G +E+G+ + ++
Sbjct: 376 NKQYQD----ALAIYSEMRLNGIIPDEVTMSTVASACAHIGALELGKEIHHYVM 425
>gi|15226463|ref|NP_179705.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206523|sp|Q9SKQ4.1|PP167_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g21090
gi|4803934|gb|AAD29807.1| unknown protein [Arabidopsis thaliana]
gi|330252028|gb|AEC07122.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 597
Score = 255 bits (651), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 139/421 (33%), Positives = 232/421 (55%), Gaps = 12/421 (2%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+NT++ Y+ + +A YK+ ++ F+ F+++ L+ C L
Sbjct: 147 WNTMVIGYAQDGNLHEALWFYKEFRRSGIK--------FNEFSFAGLLTACVKSRQLQLN 198
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
Q H + GF S+V ++ ++++ Y G ++ + + FDEM +++ W +I+G K
Sbjct: 199 RQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWTTLISGYAKL 258
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
G++E A LF EMP +N VSWT +I GY R N AL LFRKM+A +P + T +
Sbjct: 259 GDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALG-VKPEQFTFSSC 317
Query: 214 LPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVER 273
L A ++ + IHGY + I V++ LID Y+K G + ++ ++F I ++
Sbjct: 318 LCASASIASLRHGKEIHGYMIRTNVRPNAI-VISSLIDMYSKSGSLEASERVFR-ICDDK 375
Query: 274 KNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNF 333
+ V W ++IS A HG+G +A+ M K ++PNR T + +LNACSH GLVEEGL +
Sbjct: 376 HDCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQPNRTTLVVILNACSHSGLVEEGLRW 435
Query: 334 FDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFH 393
F+ M + ++PD +HY CLID+LGRAG ++ + +P E D +W +LG C H
Sbjct: 436 FESMTVQHGIVPDQEHYACLIDLLGRAGCFKELMRKIEEMPFE-PDKHIWNAILGVCRIH 494
Query: 394 GNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSL 453
GN E+G++ ++++++ Y+L+ +I A G++ E+LR VM +R K S
Sbjct: 495 GNEELGKKAADELIKLDPESSAPYILLSSIYADHGKWELVEKLRGVMKKRRVNKEKAVSW 554
Query: 454 V 454
+
Sbjct: 555 I 555
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 112/360 (31%), Positives = 176/360 (48%), Gaps = 37/360 (10%)
Query: 80 LIRTCATLSHPNLGTQLHAVISKVGFQ-SHVYVNTALVNMYVSLGFLKDSSKLFDEMPER 138
L++ C G +H + GF+ + ++ L+ MY+ G D+ K+FD+M R
Sbjct: 52 LLQQCGDTKSLKQGKWIHRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLR 111
Query: 139 NLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRK-- 196
NL +WN M++G VK G L AR +F+ MP R+VVSW ++ GY + +EAL +++
Sbjct: 112 NLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFR 171
Query: 197 --------------MVACEYTEPSEITILA---VLPAIWQNGDVKSCQLIHGYGE----- 234
+ AC + ++ A VL A + + V SC +I Y +
Sbjct: 172 RSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQME 231
Query: 235 --KRGF---TAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMH 289
KR F T DI + LI YAK G + +A KLF + KN VSWT++I+G+
Sbjct: 232 SAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLF--CEMPEKNPVSWTALIAGYVRQ 289
Query: 290 GMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKH 349
G G A++ F +M +G+KP + TF S L A + + G M+ V P+
Sbjct: 290 GSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMI-RTNVRPNAIV 348
Query: 350 YGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEM 409
LIDM ++G LE +E+ I + D V W T++ A + HG +G + R + +M
Sbjct: 349 ISSLIDMYSKSGSLEASERV-FRICDDKHDCVFWNTMISALAQHG---LGHKALRMLDDM 404
>gi|357498701|ref|XP_003619639.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494654|gb|AES75857.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1182
Score = 254 bits (650), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 163/470 (34%), Positives = 253/470 (53%), Gaps = 34/470 (7%)
Query: 12 NITTQIHSHLLTT---------NSLLHHSQLFNTLLHFYSLAESPQKAFLLYKQLQQIYT 62
N Q H++L+TT N L + L + + PQ +Y + I +
Sbjct: 193 NQIKQTHANLITTAQITLPVIANKFLKNVALASLTYAHKLFDQIPQPDLFIYNTM--IKS 250
Query: 63 HSHSPLPPL-----FDS-----------FTYSFLIRTCATLSHPNLGTQLHAVISKVGFQ 106
HS SP L F S +++ F C G Q+ KVG
Sbjct: 251 HSMSPHSYLDSIAVFRSLIRDSGYFPNRYSFVFAFGACGNGMCVREGEQVFTHAVKVGLD 310
Query: 107 SHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEM 166
+V+V AL+ M+ G ++D+ +FD +R+ +WN MI V G + A+ LF+EM
Sbjct: 311 GNVFVVNALIGMFGKWGRVEDARNVFDSAVDRDFYSWNTMIGAYVGSGNMVLAKELFDEM 370
Query: 167 PCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSC 226
R+VVSW+ II GY ++ EAL F KM+ E +P+E T+++ L A +
Sbjct: 371 HERDVVSWSTIIAGYVQVGCFMEALDFFHKMLQSE-VKPNEYTMVSALAACSNLVALDQG 429
Query: 227 QLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGF 286
+ IH Y + D R+L LID YAKCG I SAS +F + V+RK + W ++I GF
Sbjct: 430 KWIHVYIRRDNIKMND-RLLASLIDMYAKCGEIDSASSVFHEHKVKRK-VWPWNAMIGGF 487
Query: 287 AMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPD 346
AMHG +EA+ F +M+ + PN+VTF+++LNACSHG +V+EG ++F+ M + + P+
Sbjct: 488 AMHGKPEEAINVFEKMKVEKVSPNKVTFIALLNACSHGYMVKEGKSYFELMASDYGINPE 547
Query: 347 IKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKI 406
I+HYGC++D+L R+G L+ +E+ L +P DV +W LL AC + ++E G R+ R I
Sbjct: 548 IEHYGCMVDLLSRSGHLKDSEEMILSMPMA-PDVAIWGALLNACRIYKDMERGYRIGRII 606
Query: 407 LEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNA--FKVPGCSLV 454
E++ + G VL+ NI + GR+ +A R+ R +E N+ K+PG S +
Sbjct: 607 KEIDPNHIGCNVLLGNIYSTSGRWNEA-RMVREKNEINSDRKKIPGFSSI 655
>gi|356495448|ref|XP_003516589.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Glycine max]
Length = 667
Score = 254 bits (649), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 140/421 (33%), Positives = 230/421 (54%), Gaps = 13/421 (3%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+N+++ YS +A LL++++ Q+ + D FT L+ + + +LG
Sbjct: 206 WNSMIAGYSKMGFCDEAILLFQEMLQLGVEA--------DVFTLVSLLSASSKHCNLDLG 257
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
+H I G + V AL++MY G L+ + +FD+M ++++V+W M+
Sbjct: 258 RFVHLYIVITGVEIDSIVTNALIDMYAKCGHLQFAKHVFDQMLDKDVVSWTSMVNAYANQ 317
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
G +E A +F MP +NVVSW II + + EA+ LF +M P + T++++
Sbjct: 318 GLVENAVQIFNHMPVKNVVSWNSIICCLVQEGQYTEAVELFHRMCI-SGVMPDDATLVSI 376
Query: 214 LPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVER 273
L GD+ + H Y T + + N LID YAKCG + +A +F +
Sbjct: 377 LSCCSNTGDLALGKQAHCYICDNIITV-SVTLCNSLIDMYAKCGALQTAIDIF--FGMPE 433
Query: 274 KNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNF 333
KN+VSW II A+HG G+EA+E F MQ GL P+ +TF +L+ACSH GLV+ G +
Sbjct: 434 KNVVSWNVIIGALALHGFGEEAIEMFKSMQASGLYPDEITFTGLLSACSHSGLVDMGRYY 493
Query: 334 FDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFH 393
FD M+ + P ++HY C++D+LGR G L +A +P + DVVVW LLGAC +
Sbjct: 494 FDIMISTFRISPGVEHYACMVDLLGRGGFLGEAMTLIQKMPVK-PDVVVWGALLGACRIY 552
Query: 394 GNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSL 453
GN+E+ +++ +++LE+ R G YVL+ N+ + R+ D +++R++MD+ K S
Sbjct: 553 GNLEIAKQIMKQLLELGRFNSGLYVLLSNMYSESQRWDDMKKIRKIMDDSGIKKCRAISF 612
Query: 454 V 454
+
Sbjct: 613 I 613
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 117/456 (25%), Positives = 193/456 (42%), Gaps = 81/456 (17%)
Query: 18 HSHLLTTNSLLHHSQLFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTY 77
++HLL + ++N L+ YS + P K+ LL++Q+ S P+P + FT+
Sbjct: 89 YAHLLFDQIPQPNKFMYNHLIRGYSNSNDPMKSLLLFRQMV-----SAGPMP---NQFTF 140
Query: 78 SFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPE 137
F+++ CA +HA K+G H V A++ YV+ +
Sbjct: 141 PFVLKACAAKPFYWEAVIVHAQAIKLGMGPHACVQNAILTAYVACRLILS---------- 190
Query: 138 RNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKM 197
AR +F+++ R +VSW +I GY++M +EA+ LF++M
Sbjct: 191 ---------------------ARQVFDDISDRTIVSWNSMIAGYSKMGFCDEAILLFQEM 229
Query: 198 VACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCG 257
+ E T++++L A ++ ++ + +H Y G D V N LID YAKCG
Sbjct: 230 LQLG-VEADVFTLVSLLSASSKHCNLDLGRFVHLYIVITG-VEIDSIVTNALIDMYAKCG 287
Query: 258 CIFSASKLFEDI-----------------------------SVERKNLVSWTSIISGFAM 288
+ A +F+ + + KN+VSW SII
Sbjct: 288 HLQFAKHVFDQMLDKDVVSWTSMVNAYANQGLVENAVQIFNHMPVKNVVSWNSIICCLVQ 347
Query: 289 HGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIK 348
G EAVE F RM G+ P+ T +S+L+ CS+ G + G + C+ + +
Sbjct: 348 EGQYTEAVELFHRMCISGVMPDDATLVSILSCCSNTGDLALGKQAHCYI---CDNIITVS 404
Query: 349 HYGC--LIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKI 406
C LIDM + G L+ A G+P + +VV W ++GA + HG GE
Sbjct: 405 VTLCNSLIDMYAKCGALQTAIDIFFGMPEK--NVVSWNVIIGALALHG---FGEEAIEMF 459
Query: 407 LEME-RGYGGDYVLMYNILAGVGRFGDAERLRRVMD 441
M+ G D + +L+ G + R D
Sbjct: 460 KSMQASGLYPDEITFTGLLSACSHSGLVDMGRYYFD 495
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 130/264 (49%), Gaps = 17/264 (6%)
Query: 139 NLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMV 198
+VT +++ V+ G+L +A LF+++P N + +I GY+ N ++L LFR+MV
Sbjct: 70 QVVTLGKLLSLCVQEGDLRYAHLLFDQIPQPNKFMYNHLIRGYSNSNDPMKSLLLFRQMV 129
Query: 199 AC-----EYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTY 253
+ ++T P + A P W+ ++H K G V N ++ Y
Sbjct: 130 SAGPMPNQFTFPFVLKACAAKPFYWE------AVIVHAQAIKLGMGPHAC-VQNAILTAY 182
Query: 254 AKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVT 313
C I SA ++F+DIS + +VSW S+I+G++ G EA+ F M ++G++ + T
Sbjct: 183 VACRLILSARQVFDDIS--DRTIVSWNSMIAGYSKMGFCDEAILLFQEMLQLGVEADVFT 240
Query: 314 FLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGI 373
+S+L+A S ++ G F + V D LIDM + G L+ A+ +
Sbjct: 241 LVSLLSASSKHCNLDLG-RFVHLYIVITGVEIDSIVTNALIDMYAKCGHLQFAKHVFDQM 299
Query: 374 PSEITDVVVWRTLLGACSFHGNVE 397
+ DVV W +++ A + G VE
Sbjct: 300 LDK--DVVSWTSMVNAYANQGLVE 321
>gi|413924390|gb|AFW64322.1| hypothetical protein ZEAMMB73_176484 [Zea mays]
Length = 496
Score = 254 bits (649), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 146/394 (37%), Positives = 229/394 (58%), Gaps = 12/394 (3%)
Query: 66 SPLPPLFDSFTYSFLIRTCA-----TLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYV 120
SP P + T ++ CA L+ P L LHA K+ F SH+ ++T L Y+
Sbjct: 61 SPAAPAPNDVTLLTVLSACADSPSSPLASP-LALTLHARALKL-FPSHLLLSTCLARFYL 118
Query: 121 SLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDG 180
+ + +LFD MP R++VT+N MI+GL++ G ++ A +F+ MP + VSWT +IDG
Sbjct: 119 ASRLPHLALQLFDSMPVRSVVTYNTMISGLMRNGLVDAAFEVFDGMPGPDKVSWTALIDG 178
Query: 181 YTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTA 240
+ + R +EA+ FR M+ + E IT++AV+ A + G + +H ++
Sbjct: 179 FVKNGRHDEAIDCFRAML-LDGVETDYITLVAVVSACAEVGALGLGMWVHRLVLRQRLER 237
Query: 241 FDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFG 300
++RV N LID YA+CG + A+++F S+ ++ +VSW S+I GFA +G +A+E F
Sbjct: 238 -NVRVANSLIDMYARCGQVNLAAQVFR--SIRKRTVVSWNSMIVGFAANGRCTDAIELFE 294
Query: 301 RMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRA 360
M++ G KP+ VT VL ACSH GL E GL ++D M E V ++HYGC++D+LGRA
Sbjct: 295 EMRRQGFKPDAVTLTGVLTACSHAGLTEHGLRYYDLMTTEYGVAARMEHYGCVVDLLGRA 354
Query: 361 GRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLM 420
GRL++A +P +VV+ LL C HGN++M E++ + + E++ +YVL+
Sbjct: 355 GRLDEAMHVVETMPMRPNEVVLG-ALLAGCRTHGNLDMAEQMMQHLFELDPQGDANYVLL 413
Query: 421 YNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
NI A VG++ A ++R +M R K PG S V
Sbjct: 414 SNIYAAVGKWDGAGKVRSLMKARGVKKRPGHSTV 447
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 74/314 (23%), Positives = 132/314 (42%), Gaps = 55/314 (17%)
Query: 169 RNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTE-PSEITILAVLPAIWQNGDVKSCQ 227
R+VVSWT I R + A A MV+ P+++T+L VL A D S
Sbjct: 30 RDVVSWTSTISRAARQGDLHAAAASLCAMVSSPAAPAPNDVTLLTVLSAC---ADSPSSP 86
Query: 228 L-------IHGYGEK--------------------------RGFTAFDIRVL---NCLID 251
L +H K + F + +R + N +I
Sbjct: 87 LASPLALTLHARALKLFPSHLLLSTCLARFYLASRLPHLALQLFDSMPVRSVVTYNTMIS 146
Query: 252 TYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNR 311
+ G + +A ++F+ + K VSWT++I GF +G EA++ F M G++ +
Sbjct: 147 GLMRNGLVDAAFEVFDGMPGPDK--VSWTALIDGFVKNGRHDEAIDCFRAMLLDGVETDY 204
Query: 312 VTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTAL 371
+T ++V++AC+ G + G+ + ++V + +++ LIDM R G++ A +
Sbjct: 205 ITLVAVVSACAEVGALGLGM-WVHRLVLRQRLERNVRVANSLIDMYARCGQVNLAAQVFR 263
Query: 372 GIPSEITDVVVWRTLLGACSFHGN----VEMGERVTRKILEMERGYGGDYVLMYNILAGV 427
I VV W +++ + +G +E+ E + R+ G+ D V + +L
Sbjct: 264 SIRKRT--VVSWNSMIVGFAANGRCTDAIELFEEMRRQ------GFKPDAVTLTGVLTAC 315
Query: 428 GRFGDAERLRRVMD 441
G E R D
Sbjct: 316 SHAGLTEHGLRYYD 329
>gi|224116552|ref|XP_002331925.1| predicted protein [Populus trichocarpa]
gi|222874597|gb|EEF11728.1| predicted protein [Populus trichocarpa]
Length = 530
Score = 254 bits (649), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 147/421 (34%), Positives = 230/421 (54%), Gaps = 12/421 (2%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+ +L++ Y + P KAF ++ +L + L P DS + + C G
Sbjct: 70 YTSLINLYLSTQLPIKAFSVFSKL------VNEGLRP--DSHSVVGALSACGKKQDLLNG 121
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
+H +I + ++ V AL++MY G +K + +F +M +++ +W ++ G V
Sbjct: 122 KLVHGMIFRFQLGANSIVGNALIDMYCRNGEIKIAQLVFKQMGIKDVSSWTSLLNGFVMC 181
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
LE AR +F+EMP RN V+WT +I GY R L +FR+M A +P+ IT +AV
Sbjct: 182 NGLESARRVFDEMPWRNDVAWTAMITGYVRGGMPIRGLEMFRQMKAEGENQPTVITAVAV 241
Query: 214 LPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVER 273
L G Q +HGY K + V N L+D Y+K GC+ SA K+F+ + +
Sbjct: 242 LSGCADLGAHDHGQAVHGYISKVNLDK-GVTVSNALMDMYSKGGCVESAMKIFDRLV--K 298
Query: 274 KNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNF 333
K++ SWT++IS + HG G A+E F M + G+ PN VTFL VL+ CSH GL+ E
Sbjct: 299 KDVFSWTTMISAHSSHGKGNHALEVFYDMLESGVIPNDVTFLLVLSGCSHSGLLVEANKL 358
Query: 334 FDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFH 393
F+ M++ P I+HYGC++D+L RAG LE+A++ +P + D V+WR+LL AC
Sbjct: 359 FNGMIQCYGFEPKIEHYGCMVDLLCRAGLLEEAKELIDNMPMD-PDAVIWRSLLSACMNQ 417
Query: 394 GNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSL 453
N+ + E +KI+E+E G YVL+ NI R DA ++R++M ++ K P CS
Sbjct: 418 RNLGLAEIAGKKIIELEPHDDGVYVLLSNIYHVANRMKDARKMRKMMGDQKVMKKPACSY 477
Query: 454 V 454
+
Sbjct: 478 I 478
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 75/324 (23%), Positives = 131/324 (40%), Gaps = 66/324 (20%)
Query: 115 LVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSW 174
LVN Y LG +D+ K+F + + + VT +
Sbjct: 42 LVNRYAKLGNPRDAQKVFGYIQDPDRVT-------------------------------Y 70
Query: 175 TGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGE 234
T +I+ Y +A ++F K+V E P +++ L A + D+ + +L+HG
Sbjct: 71 TSLINLYLSTQLPIKAFSVFSKLVN-EGLRPDSHSVVGALSACGKKQDLLNGKLVHGMIF 129
Query: 235 KRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVER--------------------- 273
+ A I V N LID Y + G I A +F+ + ++
Sbjct: 130 RFQLGANSI-VGNALIDMYCRNGEIKIAQLVFKQMGIKDVSSWTSLLNGFVMCNGLESAR 188
Query: 274 --------KNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGL-KPNRVTFLSVLNACSHG 324
+N V+WT++I+G+ GM +E F +M+ G +P +T ++VL+ C+
Sbjct: 189 RVFDEMPWRNDVAWTAMITGYVRGGMPIRGLEMFRQMKAEGENQPTVITAVAVLSGCADL 248
Query: 325 GLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWR 384
G + G + + + + L+DM + G +E A K + + DV W
Sbjct: 249 GAHDHG-QAVHGYISKVNLDKGVTVSNALMDMYSKGGCVESAMKIFDRLVKK--DVFSWT 305
Query: 385 TLLGACSFHGNVEMGERVTRKILE 408
T++ A S HG V +LE
Sbjct: 306 TMISAHSSHGKGNHALEVFYDMLE 329
Score = 42.0 bits (97), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 82/184 (44%), Gaps = 9/184 (4%)
Query: 221 GDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWT 280
D+ + + IH +G + + L++ YAK G A K+F ++ + V++T
Sbjct: 14 ADLVTLKQIHAQALTQGLLFIEQPLACKLVNRYAKLGNPRDAQKVFG--YIQDPDRVTYT 71
Query: 281 SIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLN--FFDKMV 338
S+I+ + + +A F ++ GL+P+ + + L+AC G ++ LN M+
Sbjct: 72 SLINLYLSTQLPIKAFSVFSKLVNEGLRPDSHSVVGALSAC---GKKQDLLNGKLVHGMI 128
Query: 339 EECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEM 398
++ + LIDM R G ++ A+ + I DV W +LL +E
Sbjct: 129 FRFQLGANSIVGNALIDMYCRNGEIKIAQLVFKQMG--IKDVSSWTSLLNGFVMCNGLES 186
Query: 399 GERV 402
RV
Sbjct: 187 ARRV 190
>gi|449476974|ref|XP_004154891.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g14470-like [Cucumis sativus]
Length = 759
Score = 254 bits (649), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 145/426 (34%), Positives = 238/426 (55%), Gaps = 26/426 (6%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+N + Y+ E P++A L+ Q+ + + P D T+ I +C+++ P L
Sbjct: 226 WNAMQSAYAQKECPKEALNLFHQMLE------EGITP--DDTTWVVTISSCSSIGDPTLA 277
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEM-PERNLVTWNVMITGLVK 152
+ +I + + +V TAL++M+ G L+ + +FDE+ +RN VTWN+MI+ +
Sbjct: 278 DSILRMIDQKHIVLNSFVKTALLDMHAKFGNLEIARNIFDELGSQRNAVTWNIMISAYTR 337
Query: 153 WGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILA 212
G+L AR LF+ MP R+VVSW +I GY + S ++ LF++M++C +P E+TI +
Sbjct: 338 VGKLSLARELFDNMPKRDVVSWNSMIAGYAQNGESAMSIELFKEMISCMDIQPDEVTIAS 397
Query: 213 VLPAIWQNGDVK----SCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFED 268
VL A G +K ++ K G + F N LI Y+KCG + A ++F+
Sbjct: 398 VLSACGHIGALKLSYWVLDIVREKNIKLGISGF-----NSLIFMYSKCGSVADAHRIFQT 452
Query: 269 ISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVE 328
+ +++VS+ ++ISGFA +G GKEA++ M++ G++P+ VT++ VL ACSH GL+
Sbjct: 453 MGT--RDVVSFNTLISGFAANGHGKEAIKLVLTMEEEGIEPDHVTYIGVLTACSHAGLLN 510
Query: 329 EGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLG 388
EG N F + P + HY C++D+LGRAG L++A+ +P + V+ +LL
Sbjct: 511 EGKNVFKSIQA-----PTVDHYACMVDLLGRAGELDEAKMLIQSMPMK-PHAGVYGSLLN 564
Query: 389 ACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKV 448
A H V +GE K+ E+E G+YVL+ NI A GR+ D +R+R +M + K
Sbjct: 565 ASRIHKRVGLGELAASKLFELEPQNLGNYVLLSNIYASFGRWEDVKRVREMMKKGGLKKS 624
Query: 449 PGCSLV 454
G S V
Sbjct: 625 VGMSWV 630
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 124/506 (24%), Positives = 213/506 (42%), Gaps = 97/506 (19%)
Query: 2 HILQNSQTPNNI--------TTQIHSHLLTTNSLLHHS-----QLFNTLLHFYSLAESPQ 48
H++ NS +N T++H+H +S+ S +++ +L +YS +
Sbjct: 23 HLVHNSLHSHNYWVSLLLINCTRLHAHPAYVDSIFTSSPSPDASVYSCMLKYYSRMGAHN 82
Query: 49 KAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSH 108
+ L+K THS + P F Y +LI+ G HA + K+G
Sbjct: 83 QVVSLFK-----CTHSLNLRP---QPFVYIYLIKLAG-----KSGNMFHAYVLKLGHIDD 129
Query: 109 VYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPC 168
++ A+++MY G + + LF++M ER L WN MI+G K G A LF MP
Sbjct: 130 HFIRNAILDMYAKNGQVDLARNLFEQMAERTLADWNSMISGCWKSGNETEAVVLFNMMPA 189
Query: 169 RNVVSWTGIIDGYTRM--------------NRS-----------------NEALALFRKM 197
RN+++WT ++ GY +M RS EAL LF +M
Sbjct: 190 RNIITWTSMVTGYAKMGDLESARRYFDEMPERSVVSWNAMQSAYAQKECPKEALNLFHQM 249
Query: 198 VACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCG 257
+ E P + T + + + GD I +++ + V L+D +AK G
Sbjct: 250 LE-EGITPDDTTWVVTISSCSSIGDPTLADSILRMIDQKHIV-LNSFVKTALLDMHAKFG 307
Query: 258 CIFSASKLFEDISVER------------------------------KNLVSWTSIISGFA 287
+ A +F+++ +R +++VSW S+I+G+A
Sbjct: 308 NLEIARNIFDELGSQRNAVTWNIMISAYTRVGKLSLARELFDNMPKRDVVSWNSMIAGYA 367
Query: 288 MHGMGKEAVENFGRMQK-VGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPD 346
+G ++E F M + ++P+ VT SVL+AC H G ++ D +V E +
Sbjct: 368 QNGESAMSIELFKEMISCMDIQPDEVTIASVLSACGHIGALKLSYWVLD-IVREKNIKLG 426
Query: 347 IKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKI 406
I + LI M + G + A + + + DVV + TL+ + +G+ G+ + +
Sbjct: 427 ISGFNSLIFMYSKCGSVADAHRIFQTMGTR--DVVSFNTLISGFAANGH---GKEAIKLV 481
Query: 407 LEM-ERGYGGDYVLMYNILAGVGRFG 431
L M E G D+V +L G
Sbjct: 482 LTMEEEGIEPDHVTYIGVLTACSHAG 507
>gi|449442178|ref|XP_004138859.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
gi|449529652|ref|XP_004171812.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
Length = 606
Score = 254 bits (649), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 150/432 (34%), Positives = 235/432 (54%), Gaps = 44/432 (10%)
Query: 24 TNSLLHHSQLFNTLLHFYS-LAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIR 82
++ L+ + LFNTL+ Y+ S KA LY + H + P + FTY F+++
Sbjct: 89 ADTRLYDAFLFNTLIRAYAQTGHSKDKALALYGIML------HDAILP--NKFTYPFVLK 140
Query: 83 TCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVT 142
CA L NLG +H + K GF ++V +V+MY
Sbjct: 141 ACAGLEVLNLGQTVHGSVVKFGFDCDIHVQNTMVHMYSCCA------------------- 181
Query: 143 WNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEY 202
G + AR +F+EMP + V+W+ +I GY R+ RS EA+ALFR+M E
Sbjct: 182 -----------GGINSARKVFDEMPKSDSVTWSAMIGGYARVGRSTEAVALFREMQMAEV 230
Query: 203 TEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSA 262
P EIT++++L A G ++ + I Y E+ + V N LID +AKCG I A
Sbjct: 231 C-PDEITMVSMLSACTDLGALELGKWIEAYIERHEIHK-PVEVSNALIDMFAKCGDISKA 288
Query: 263 SKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACS 322
KLF ++ K +VSWTS+I G AMHG G+EA F M G+ P+ V F+ +L+ACS
Sbjct: 289 LKLFR--AMNEKTIVSWTSVIVGMAMHGRGQEATCLFEEMTSSGVAPDDVAFIGLLSACS 346
Query: 323 HGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVV 382
H GLVE G +F M+++ +++P I+HYGC++DM R G +++A + +P E + V+
Sbjct: 347 HSGLVERGREYFGSMMKKYKLVPKIEHYGCMVDMYCRTGLVKEALEFVRNMPIE-PNPVI 405
Query: 383 WRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDE 442
RTL+ AC HG ++GE++T+ +++ E + +YVL+ NI A + ++R VM+
Sbjct: 406 LRTLVSACRGHGEFKLGEKITKLLMKHEPLHESNYVLLSNIYAKTLSWEKKTKIREVMEV 465
Query: 443 RNAFKVPGCSLV 454
+ KVPG +++
Sbjct: 466 KGMKKVPGSTMI 477
>gi|449460189|ref|XP_004147828.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g14470-like [Cucumis sativus]
Length = 759
Score = 254 bits (649), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 145/426 (34%), Positives = 238/426 (55%), Gaps = 26/426 (6%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+N + Y+ E P++A L+ Q+ + + P D T+ I +C+++ P L
Sbjct: 226 WNAMQSAYAQKECPKEALNLFHQMLE------EGITP--DDTTWVVTISSCSSIGDPTLA 277
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEM-PERNLVTWNVMITGLVK 152
+ +I + + +V TAL++M+ G L+ + +FDE+ +RN VTWN+MI+ +
Sbjct: 278 DSILRMIDQKHIVLNSFVKTALLDMHAKFGNLEIARNIFDELGSQRNAVTWNIMISAYTR 337
Query: 153 WGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILA 212
G+L AR LF+ MP R+VVSW +I GY + S ++ LF++M++C +P E+TI +
Sbjct: 338 VGKLSLARELFDNMPKRDVVSWNSMIAGYAQNGESAMSIELFKEMISCMDIQPDEVTIAS 397
Query: 213 VLPAIWQNGDVK----SCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFED 268
VL A G +K ++ K G + F N LI Y+KCG + A ++F+
Sbjct: 398 VLSACGHIGALKLSYWVLDIVREKNIKLGISGF-----NSLIFMYSKCGSVADAHRIFQT 452
Query: 269 ISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVE 328
+ +++VS+ ++ISGFA +G GKEA++ M++ G++P+ VT++ VL ACSH GL+
Sbjct: 453 MGT--RDVVSFNTLISGFAANGHGKEAIKLVLTMEEEGIEPDHVTYIGVLTACSHAGLLN 510
Query: 329 EGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLG 388
EG N F + P + HY C++D+LGRAG L++A+ +P + V+ +LL
Sbjct: 511 EGKNVFKSIQA-----PTVDHYACMVDLLGRAGELDEAKMLIQSMPMK-PHAGVYGSLLN 564
Query: 389 ACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKV 448
A H V +GE K+ E+E G+YVL+ NI A GR+ D +R+R +M + K
Sbjct: 565 ASRIHKRVGLGELAASKLFELEPQNLGNYVLLSNIYASFGRWEDVKRVREMMKKGGLKKS 624
Query: 449 PGCSLV 454
G S V
Sbjct: 625 VGMSWV 630
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 124/506 (24%), Positives = 213/506 (42%), Gaps = 97/506 (19%)
Query: 2 HILQNSQTPNNI--------TTQIHSHLLTTNSLLHHS-----QLFNTLLHFYSLAESPQ 48
H++ NS +N T++H+H +S+ S +++ +L +YS +
Sbjct: 23 HLVHNSLHSHNYWVSLLLINCTRLHAHPAYVDSIFTSSPSPDASVYSCMLKYYSRMGAHN 82
Query: 49 KAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSH 108
+ L+K THS + P F Y +LI+ G HA + K+G
Sbjct: 83 QVVSLFK-----CTHSLNLRP---QPFVYIYLIKLAG-----KSGNLFHAYVLKLGHIDD 129
Query: 109 VYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPC 168
++ A+++MY G + + LF++M ER L WN MI+G K G A LF MP
Sbjct: 130 HFIRNAILDMYAKNGQVDLARNLFEQMAERTLADWNSMISGCWKSGNETEAVVLFNMMPA 189
Query: 169 RNVVSWTGIIDGYTRM--------------NRS-----------------NEALALFRKM 197
RN+++WT ++ GY +M RS EAL LF +M
Sbjct: 190 RNIITWTSMVTGYAKMGDLESARRYFDEMPERSVVSWNAMQSAYAQKECPKEALNLFHQM 249
Query: 198 VACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCG 257
+ E P + T + + + GD I +++ + V L+D +AK G
Sbjct: 250 LE-EGITPDDTTWVVTISSCSSIGDPTLADSILRMIDQKHIV-LNSFVKTALLDMHAKFG 307
Query: 258 CIFSASKLFEDISVER------------------------------KNLVSWTSIISGFA 287
+ A +F+++ +R +++VSW S+I+G+A
Sbjct: 308 NLEIARNIFDELGSQRNAVTWNIMISAYTRVGKLSLARELFDNMPKRDVVSWNSMIAGYA 367
Query: 288 MHGMGKEAVENFGRMQK-VGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPD 346
+G ++E F M + ++P+ VT SVL+AC H G ++ D +V E +
Sbjct: 368 QNGESAMSIELFKEMISCMDIQPDEVTIASVLSACGHIGALKLSYWVLD-IVREKNIKLG 426
Query: 347 IKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKI 406
I + LI M + G + A + + + DVV + TL+ + +G+ G+ + +
Sbjct: 427 ISGFNSLIFMYSKCGSVADAHRIFQTMGTR--DVVSFNTLISGFAANGH---GKEAIKLV 481
Query: 407 LEM-ERGYGGDYVLMYNILAGVGRFG 431
L M E G D+V +L G
Sbjct: 482 LTMEEEGIEPDHVTYIGVLTACSHAG 507
>gi|297844244|ref|XP_002890003.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297335845|gb|EFH66262.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 471
Score = 254 bits (649), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 129/340 (37%), Positives = 204/340 (60%), Gaps = 3/340 (0%)
Query: 115 LVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSW 174
+V Y+ +G + ++ LFD+MP R++++WN ++ G G++E +F+EM RNV SW
Sbjct: 93 MVAGYIEMGNMMEARSLFDQMPCRDVMSWNTVLEGYANIGDMEACERVFDEMLERNVFSW 152
Query: 175 TGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGE 234
G+I GY + R +E L F++MV P++ T+ VL A + G + +H YGE
Sbjct: 153 NGLIKGYAQNGRVSEVLGSFKRMVDEGSVFPNDATLTLVLSACAKLGAFDFGKRVHKYGE 212
Query: 235 KRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKE 294
G+ D+ V N LID Y KCG I A ++F+ I +R++L+SW ++I+G A HG G E
Sbjct: 213 NLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGI--KRRDLISWNTMINGLAAHGHGTE 270
Query: 295 AVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLI 354
A++ F M+ G+ P++VTF+ VL AC H GLVE+GL +F+ M + + P I+H GC++
Sbjct: 271 ALDLFHEMKNCGISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFTDFSITPQIEHCGCVV 330
Query: 355 DMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYG 414
D+L RAG L QA + +P + D V+W TLLGA + V+ GE ++++++E
Sbjct: 331 DLLSRAGFLTQAVEFINKMPVK-ADAVIWATLLGASKVYKKVDTGELALKELIKLEPRNP 389
Query: 415 GDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
++V++ NI GRF DA RL+ M + K G S +
Sbjct: 390 ANFVMLSNIYGDAGRFDDAARLKVAMRDTGFKKEAGISWI 429
>gi|449440231|ref|XP_004137888.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g15300-like [Cucumis sativus]
gi|449521725|ref|XP_004167880.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g15300-like [Cucumis sativus]
Length = 521
Score = 254 bits (649), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 164/484 (33%), Positives = 249/484 (51%), Gaps = 60/484 (12%)
Query: 18 HSHLLTTNSLLHHSQLFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTY 77
H+ L + + S + NT++ YS P KA L+Y ++Q++ S D FTY
Sbjct: 51 HACALFQETSMDDSFICNTMIRAYSNTVFPLKALLIYNRMQRMDVDS--------DHFTY 102
Query: 78 SFLIRTCA-----------TLSH---PNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLG 123
+F++R CA H G+++HA I K+GF +V +L+ +Y G
Sbjct: 103 NFVLRACARAIKCTEMDDQCFGHHIISRKGSEIHARILKLGFDQDHHVQNSLLLVYSGSG 162
Query: 124 FL-------------------------------KDSSKLFDEMPERNLVTWNVMITGLVK 152
+ K + L + MP+ N V+WN ++ ++
Sbjct: 163 LVGFARLIFNEMTVKTAVSWNIMMSAYNRVHDYKSADVLLESMPQTNAVSWNTLLARYIR 222
Query: 153 WGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILA 212
L AR +FEEMP R+VVSW II GY + AL LF M +E+T ++
Sbjct: 223 LNNLVAARKVFEEMPERDVVSWNSIISGYVNVKDYKGALDLFHSMKQWN-IRATEVTFIS 281
Query: 213 VLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVE 272
+L A + G ++ + IH +++ + + + N ++D YAKCG + A ++F ++ E
Sbjct: 282 ILGACAELGALEIGKKIHDSLKEKHYR-IEGYLGNAIVDMYAKCGELGLALEVFNEM--E 338
Query: 273 RKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVG--LKPNRVTFLSVLNACSHGGLVEEG 330
K + W ++I G A+HG + A+E F M+ KPNR+TF+++L ACSH GL+ EG
Sbjct: 339 MKPVSCWNAMIMGLAVHGHCERALEMFDSMKAEDGDHKPNRITFIALLIACSHKGLLAEG 398
Query: 331 LNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGAC 390
+FF MV + +++PD+KHYGC+ID+L R G LE+A P V+WRTLLG C
Sbjct: 399 RHFFSLMVTKYKIMPDLKHYGCMIDLLSRWGFLEEAYVMIKTCPFSSCS-VLWRTLLGGC 457
Query: 391 SFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPG 450
H +VE+GE RK+ E+E G GDYVL+ NI A R+ D ERLR+ M K G
Sbjct: 458 RLHRHVELGEESFRKLAELEPGKDGDYVLLSNIYAEEERWDDVERLRKEMINYGVCKKAG 517
Query: 451 CSLV 454
S V
Sbjct: 518 SSHV 521
>gi|297849216|ref|XP_002892489.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338331|gb|EFH68748.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 1014
Score = 254 bits (649), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 133/383 (34%), Positives = 223/383 (58%), Gaps = 5/383 (1%)
Query: 73 DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLF 132
D +TY+ L+++C++LS G +H + + GF V +V +Y S G + D+ K+F
Sbjct: 623 DEYTYAPLLKSCSSLSDLRFGKCVHGEVIRTGFHRLGKVRIGVVELYTSGGRMGDAQKVF 682
Query: 133 DEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALA 192
DEMPERN+V WN+M+ G G+++ S F++M R++VSW +I ++ R EAL
Sbjct: 683 DEMPERNVVVWNLMVRGFCDSGDVQRGLSFFKQMSERSIVSWNSMISSLSKCGRDREALE 742
Query: 193 LFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDT 252
LF +M+ + +P E T++ +LP G + + + IH E G I V N L+D
Sbjct: 743 LFCEMIDQGF-DPDEATVVTMLPISASLGVLDTGKWIHSTAESNGLIKDFITVGNALVDF 801
Query: 253 YAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVG-LKPNR 311
Y K G + +A+ +F + +R+N+VSW ++ISG A++G G+ ++ F M + G + PN
Sbjct: 802 YCKSGDLEAATAIFRKM--QRRNVVSWNTMISGSAVNGKGESGIDLFDAMIEEGKVAPNE 859
Query: 312 VTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTAL 371
TFL VL CS+ G VE G F M+E ++ P +HYG ++D++ R+GR+ +A +
Sbjct: 860 ATFLGVLACCSYTGQVERGEELFGLMMERFKLEPRTEHYGAMVDLMSRSGRIREAFEFLR 919
Query: 372 GIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFG 431
+P + +W +LL AC HG+V++ E +++++E G G+YVL+ N+ A GR+
Sbjct: 920 NMPVN-ANAAMWGSLLSACRSHGDVKLAELAAMELVKIEPGNSGNYVLLSNLYAEEGRWQ 978
Query: 432 DAERLRRVMDERNAFKVPGCSLV 454
D E++R +M + K G S +
Sbjct: 979 DVEKVRTLMKKNCLRKTTGQSTI 1001
>gi|345505208|gb|AEN99828.1| chlororespiratory reduction 4 [Arabis hirsuta]
Length = 615
Score = 254 bits (648), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 132/343 (38%), Positives = 210/343 (61%), Gaps = 6/343 (1%)
Query: 113 TALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVV 172
+L++ YV G ++D+ LFD+MP R++VTW M+ G K G + A+SLF++MP R+VV
Sbjct: 258 NSLIDGYVKHGRIEDAKDLFDKMPRRDVVTWATMVDGYAKLGFVHQAKSLFDQMPQRDVV 317
Query: 173 SWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGY 232
++ ++ GY + EA+ +F M + P E T++ VL AI Q G + +H Y
Sbjct: 318 AYNSMMAGYVQNRYHMEAIDIFNDMEKESHLSPDETTLVIVLSAIAQLGRLSKAMDMHLY 377
Query: 233 GEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMG 292
++ F ++ LID Y+KCG I A +FE I E K++ W ++I G A+HG+G
Sbjct: 378 TVEKKFL-LGGKLGVALIDMYSKCGSIQQAMGVFERI--ENKSIDHWNAMIGGLAIHGLG 434
Query: 293 KEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGC 352
+ A + ++++ +KP+ +TF+ VLNACSH GLV+EGL F+ M + ++ P ++HYGC
Sbjct: 435 ESAFDMLLQIERRSIKPDDITFVGVLNACSHSGLVKEGLLCFELMKRKHKIEPRLQHYGC 494
Query: 353 LIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERG 412
++D+L R+GR+E A+ +P E D V+WRT L ACS H E GE V + ++ ++ G
Sbjct: 495 MVDILSRSGRIELAKNLIEEMPIEPND-VIWRTFLTACSHHKEFETGELVAKHLI-LQAG 552
Query: 413 YG-GDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
Y YVL+ N+ A +G + + R+R +M ER K+PGCS +
Sbjct: 553 YNPSSYVLLSNMYASLGMWKEVRRVRTMMKERKIQKIPGCSWI 595
Score = 141 bits (355), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 103/385 (26%), Positives = 195/385 (50%), Gaps = 34/385 (8%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNL 92
L+N ++ +S P+KA LL+ + + D F+ S +++ C+ L
Sbjct: 90 LWNAVIKSHSHGVEPRKALLLFFLMLKNGVS--------VDKFSLSLVLKACSRLGFVKE 141
Query: 93 GTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVK 152
G Q H + K G S +++ L+ +Y+ G L + ++FD M +R+ V++N MI G VK
Sbjct: 142 GMQXHGFLRKTGIWSDLFLQNCLIGLYLKCGCLGFARQVFDRMSQRDSVSYNSMIDGYVK 201
Query: 153 WGELEFARSLFEEMPC--RNVVSWTGIIDGYT-RMNRSNEALALFRKMVACEYTEPSEIT 209
G +E AR LF+ MP +N++SW +I+GY R + + A LF +M E I+
Sbjct: 202 CGLIESARELFDLMPSEKKNLISWNSMINGYAQRADGVDIASNLFDEM-----PEKDLIS 256
Query: 210 ILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDI 269
+++ ++G ++ + + +R D+ ++D YAK G + A LF+ +
Sbjct: 257 WNSLIDGYVKHGRIEDAKDLFDKMPRR-----DVVTWATMVDGYAKLGFVHQAKSLFDQM 311
Query: 270 SVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVG-LKPNRVTFLSVLNACSHGGLVE 328
++++V++ S+++G+ + EA++ F M+K L P+ T + VL+A + G +
Sbjct: 312 P--QRDVVAYNSMMAGYVQNRYHMEAIDIFNDMEKESHLSPDETTLVIVLSAIAQLGRLS 369
Query: 329 EGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVV--WRTL 386
+ ++ VE+ + L K LIDM + G ++Q A+G+ I + + W +
Sbjct: 370 KAMDMHLYTVEK-KFLLGGKLGVALIDMYSKCGSIQQ----AMGVFERIENKSIDHWNAM 424
Query: 387 LGACSFHGNVEMGERVTRKILEMER 411
+G + HG +GE +L++ER
Sbjct: 425 IGGLAIHG---LGESAFDMLLQIER 446
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 50/256 (19%), Positives = 102/256 (39%), Gaps = 40/256 (15%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+N+++ Y +A ++ +++ S L P D T ++ A L +
Sbjct: 319 YNSMMAGYVQNRYHMEAIDIFNDMEK-----ESHLSP--DETTLVIVLSAIAQLGRLSKA 371
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
+H + F + AL++MY G ++ + +F+ + +++ WN MI GL
Sbjct: 372 MDMHLYTVEKKFLLGGKLGVALIDMYSKCGSIQQAMGVFERIENKSIDHWNAMIGGLAIH 431
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
G E A + ++ R++ +P +IT + V
Sbjct: 432 GLGESAFDMLLQIERRSI--------------------------------KPDDITFVGV 459
Query: 214 LPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVER 273
L A +G VK L +++ ++ C++D ++ G I A L E++ +E
Sbjct: 460 LNACSHSGLVKEGLLCFELMKRKHKIEPRLQHYGCMVDILSRSGRIELAKNLIEEMPIE- 518
Query: 274 KNLVSWTSIISGFAMH 289
N V W + ++ + H
Sbjct: 519 PNDVIWRTFLTACSHH 534
>gi|347954492|gb|AEP33746.1| chloroplast biogenesis 19, partial [Barbarea verna]
Length = 494
Score = 254 bits (648), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 146/383 (38%), Positives = 219/383 (57%), Gaps = 9/383 (2%)
Query: 76 TYSFLIRTCATLSHPN--LGTQLHAVISKVGF-QSHVYVNTALVNMYVSLGFLKDSSKLF 132
T+ L+ C +S + LG LH K+G ++HV V TA++ MY G + +F
Sbjct: 67 TFIALLSGCGDVSSGSEALGDLLHGYACKLGLDRTHVMVGTAILGMYSKRGRFGKARLVF 126
Query: 133 DEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALA 192
D M ++N VTWN MI G ++ G++ A LF+EMP R+++SWT +I+G+ + EALA
Sbjct: 127 DFMEDKNSVTWNTMIDGYMRSGQVNNAVKLFDEMPERDLISWTAMINGFVKKGFHEEALA 186
Query: 193 LFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDT 252
FR+M +P + I+A L A G + +H Y + F +IRV N LID
Sbjct: 187 WFREM-QISGVKPDYVAIIAALAACTHLGALSFGLWVHRYVMNQDFKN-NIRVSNSLIDL 244
Query: 253 YAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRV 312
Y +CGC+ A ++F+ + E++ +VSW S+I GFA +G E++ F +MQ+ G KP+ V
Sbjct: 245 YCRCGCVEFAREVFDKM--EKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEEGFKPDAV 302
Query: 313 TFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALG 372
TF L ACSH GLVEEGL +F M + + P I+HYGCL+D+ RAGRLE A
Sbjct: 303 TFTGALTACSHVGLVEEGLRYFQTMKRDHRISPRIEHYGCLVDLYSRAGRLEDALNVVQS 362
Query: 373 IPSEITDVVVWRTLLGACSFHG-NVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFG 431
+P + +VV+ +LL AC HG N + ER+ + + ++ +YV++ N+ A G +
Sbjct: 363 MPMKPNEVVIG-SLLAACRNHGNNTVLAERLVKHLSDLNVKSHSNYVILSNMYAADGIWE 421
Query: 432 DAERLRRVMDERNAFKVPGCSLV 454
A ++RR M K PG S V
Sbjct: 422 GASKMRRKMKGLGLKKQPGFSSV 444
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 58/125 (46%), Gaps = 10/125 (8%)
Query: 277 VSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDK 336
VSWTS I+ + +G EA + F M+ G++PN +TF+++L+ C G V G
Sbjct: 31 VSWTSRITLLSRNGRLAEAAKEFSSMRLAGVEPNHITFIALLSGC---GDVSSGSEALGD 87
Query: 337 MVE--ECEVLPDIKHY---GCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACS 391
++ C++ D H ++ M + GR +A + E + V W T++
Sbjct: 88 LLHGYACKLGLDRTHVMVGTAILGMYSKRGRFGKARLVFDFM--EDKNSVTWNTMIDGYM 145
Query: 392 FHGNV 396
G V
Sbjct: 146 RSGQV 150
>gi|357167843|ref|XP_003581359.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like, partial [Brachypodium distachyon]
Length = 745
Score = 254 bits (648), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 139/383 (36%), Positives = 214/383 (55%), Gaps = 36/383 (9%)
Query: 72 FDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKL 131
FD T + C L NLG + + G + TALV+MY
Sbjct: 270 FDEVTLLSVATACGRLGDANLGQWIAEYAEEKGMLRSRNLATALVDMYA----------- 318
Query: 132 FDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEAL 191
K GEL+ AR LF+ M R+VV+W+ +I GYT+ +R EAL
Sbjct: 319 --------------------KCGELDKARRLFDRMHSRDVVAWSAMISGYTQSDRCREAL 358
Query: 192 ALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLID 251
A+F +M E P+++T+++VL A G +++ + +H Y ++ + + L+D
Sbjct: 359 AIFNEMQGTE-VNPNDVTMVSVLSACAVLGALETGKWVHSYIRRKDLP-LTVILGTALVD 416
Query: 252 TYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNR 311
YAKCGCI A K FE + V +N +WT++I G A +G +EA+E F M + ++P
Sbjct: 417 FYAKCGCIKDAVKAFESMPV--RNTWTWTALIKGMASNGRSREALELFSSMLEANIEPTD 474
Query: 312 VTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTAL 371
VTF+ VL ACSHG LVEEG F M ++ + P I+HYGC++D+LGRAG +++A +
Sbjct: 475 VTFIGVLLACSHGCLVEEGRRHFTSMTQDYGICPRIEHYGCMVDLLGRAGLIDEAYQFIR 534
Query: 372 GIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFG 431
+P E + VVWR LL AC+ H NVE+GE ++I+ ++ + G+Y+L+ N A VG++
Sbjct: 535 NMPIE-PNAVVWRALLSACTVHKNVEIGEEALKQIVPLDPCHSGNYILLSNTYASVGQWK 593
Query: 432 DAERLRRVMDERNAFKVPGCSLV 454
+A +R+ M E+ K+PGCSL+
Sbjct: 594 NAAMVRKEMKEKGVEKIPGCSLI 616
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 90/368 (24%), Positives = 168/368 (45%), Gaps = 53/368 (14%)
Query: 31 SQLFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHP 90
++ +N L+ + A P+ A L+ ++ + + SP D T + +++C+ +
Sbjct: 135 ARSYNILIRSFLRAGHPEDALHLF--VEMLDDTAVSP-----DQHTVANTVKSCSRMCDL 187
Query: 91 NLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGL 150
++G + A K GF +V +L++MY S G
Sbjct: 188 SVGRGVQAYAFKRGFMVDQFVLNSLIHMYASCG--------------------------- 220
Query: 151 VKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEP-SEIT 209
++ A LF + + V++W +I GY + E + +F+ M+ E P E+T
Sbjct: 221 ----DVVAAHVLFHTVQVKGVIAWNAMIAGYVKNGDWKEVVEMFKGML--EVRAPFDEVT 274
Query: 210 ILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLN---CLIDTYAKCGCIFSASKLF 266
+L+V A + GD Q I Y E++G +R N L+D YAKCG + A +LF
Sbjct: 275 LLSVATACGRLGDANLGQWIAEYAEEKGM----LRSRNLATALVDMYAKCGELDKARRLF 330
Query: 267 EDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGL 326
+ + +++V+W+++ISG+ +EA+ F MQ + PN VT +SVL+AC+ G
Sbjct: 331 D--RMHSRDVVAWSAMISGYTQSDRCREALAIFNEMQGTEVNPNDVTMVSVLSACAVLGA 388
Query: 327 VEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTL 386
+E G + + ++ + L+D + G ++ A K +P + + W L
Sbjct: 389 LETG-KWVHSYIRRKDLPLTVILGTALVDFYAKCGCIKDAVKAFESMP--VRNTWTWTAL 445
Query: 387 LGACSFHG 394
+ + +G
Sbjct: 446 IKGMASNG 453
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/236 (30%), Positives = 111/236 (47%), Gaps = 8/236 (3%)
Query: 154 GELEFARSLFE--EMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITIL 211
L +A LF P R+ S+ +I + R +AL LF +M+ P + T+
Sbjct: 116 AHLSYAIRLFRLGPHPPRSARSYNILIRSFLRAGHPEDALHLFVEMLDDTAVSPDQHTVA 175
Query: 212 AVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISV 271
+ + + D+ + + Y KRGF D VLN LI YA CG + +A LF + V
Sbjct: 176 NTVKSCSRMCDLSVGRGVQAYAFKRGFM-VDQFVLNSLIHMYASCGDVVAAHVLFHTVQV 234
Query: 272 ERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGL 331
K +++W ++I+G+ +G KE VE F M +V + VT LSV AC G G
Sbjct: 235 --KGVIAWNAMIAGYVKNGDWKEVVEMFKGMLEVRAPFDEVTLLSVATACGRLGDANLG- 291
Query: 332 NFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLL 387
+ + EE +L L+DM + G L++A + + S DVV W ++
Sbjct: 292 QWIAEYAEEKGMLRSRNLATALVDMYAKCGELDKARRLFDRMHSR--DVVAWSAMI 345
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 118/287 (41%), Gaps = 65/287 (22%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
++ ++ Y+ ++ ++A ++ ++Q + + T ++ CA L G
Sbjct: 341 WSAMISGYTQSDRCREALAIFNEMQGTEVNP--------NDVTMVSVLSACAVLGALETG 392
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
+H+ I + V + TALV+ Y G +KD+ K F+ MP RN TW +I G+
Sbjct: 393 KWVHSYIRRKDLPLTVILGTALVDFYAKCGCIKDAVKAFESMPVRNTWTWTALIKGMASN 452
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
G RS EAL LF M+ EP+++T + V
Sbjct: 453 G-------------------------------RSREALELFSSMLEAN-IEPTDVTFIGV 480
Query: 214 LPAIWQNGDVKSCQLIHGYGEKRGFTAFD--------IRVLNCLIDTYAKCGCIFSASKL 265
L A C + G +R FT+ I C++D + G I A +
Sbjct: 481 LLACSHG-----CLVEEG---RRHFTSMTQDYGICPRIEHYGCMVDLLGRAGLIDEAYQF 532
Query: 266 FEDISVERKNLVSWTSIISGFAMHG---MGKEAVENFGRMQKVGLKP 309
++ +E N V W +++S +H +G+EA++ Q V L P
Sbjct: 533 IRNMPIE-PNAVVWRALLSACTVHKNVEIGEEALK-----QIVPLDP 573
>gi|38345134|emb|CAE02724.2| OSJNBa0055H05.11 [Oryza sativa Japonica Group]
gi|215697200|dbj|BAG91194.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 408
Score = 254 bits (648), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 140/380 (36%), Positives = 218/380 (57%), Gaps = 5/380 (1%)
Query: 73 DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLF 132
D + ++ TCA + G +H+ + V+ AL+NMY S ++ + KL+
Sbjct: 9 DQVIIATVLSTCAHTRNLRFGKAIHSYMLVSDTLIDAQVSCALMNMYASCADMEMAEKLY 68
Query: 133 DEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALA 192
+ + E+ +V M+ G K G++E A S+F MP ++VVSW+ +I GY ++ EAL
Sbjct: 69 NRVSEKEIVLSTTMVYGYAKNGKVEIAHSIFNGMPAKDVVSWSAMIAGYAESSKPMEALN 128
Query: 193 LFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDT 252
LF M +P EIT+L+V+ A G ++ + IH + E + + N LID
Sbjct: 129 LFHDMQR-SGVKPDEITMLSVISACANVGALEKARCIHSFVENHSMCKI-LPIGNALIDM 186
Query: 253 YAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRV 312
++KCG + A +F ++ +KN+V+WTSII+ AMHG G+ A+ F M+ G++PN V
Sbjct: 187 FSKCGSLTLALDVFN--AMPQKNVVTWTSIITASAMHGDGRSALTLFENMKSEGIQPNGV 244
Query: 313 TFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALG 372
TFL +L AC H GLVEEG F MV++ + P +HYGC++D+LGRA L QA
Sbjct: 245 TFLGLLYACCHAGLVEEGRLLFKIMVQQYRIEPMHEHYGCMVDLLGRAKLLGQAADLIQS 304
Query: 373 IPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGD 432
+ +VV+W +LL AC HG++E+G +KILE++ +GG VL+ NI A G + D
Sbjct: 305 MHLR-PNVVIWGSLLAACRMHGDLELGTFAAKKILELDPNHGGAQVLLSNIYAEYGNWND 363
Query: 433 AERLRRVMDERNAFKVPGCS 452
+ +R VM+ + +K GCS
Sbjct: 364 VKEVRGVMEVQGTWKKKGCS 383
>gi|414886078|tpg|DAA62092.1| TPA: hypothetical protein ZEAMMB73_488923 [Zea mays]
Length = 714
Score = 254 bits (648), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 130/373 (34%), Positives = 213/373 (57%), Gaps = 3/373 (0%)
Query: 80 LIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERN 139
L++ CA S G QLH VI K GF +H +V LV+ Y G + + F + +
Sbjct: 283 LMKACARYSAVTEGQQLHTVILKNGFDAHAFVQATLVHFYGCCGLIGLAQMTFRLSDKSH 342
Query: 140 LVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVA 199
+WN ++ L++ G + AR LF++MP R+ VSW+ +I GY + RS+ AL LF M+
Sbjct: 343 TASWNALLAALLRNGLIREARELFDDMPERDTVSWSTMISGYVQTGRSDMALKLFYSMLN 402
Query: 200 CEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCI 259
EP+E+T+ + L AI +G + + IH Y R D + + LID YAKCG I
Sbjct: 403 TS-IEPNEVTLASALSAIADSGTLDQGKWIHDYIMNRPVQLTD-NLSSGLIDMYAKCGSI 460
Query: 260 FSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLN 319
A + F ++ + ++ W ++I A+HG +++ F ++Q+ +KPN +TF+ VL+
Sbjct: 461 ADAVQFFNRVNDKFSSVSPWNAMICSLAIHGYAHMSLDLFSQLQRTSIKPNSITFIGVLS 520
Query: 320 ACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITD 379
AC H G V +G +F+ M E + P IKHYGC++D+LGRAG LE+AE+ +P + D
Sbjct: 521 ACCHAGTVTKGKYYFESMTREYGIQPTIKHYGCMVDLLGRAGYLEEAEQLVSMMPMK-PD 579
Query: 380 VVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRV 439
VV+W ++L A GNV +GER ++ ++++ +G + + NI A G + + +R+
Sbjct: 580 VVIWGSILSASRAQGNVALGERAAEELAKLDQTHGASKIALSNIYADAGHWINVSVVRKE 639
Query: 440 MDERNAFKVPGCS 452
+ + N ++ G S
Sbjct: 640 LQDANLERLTGRS 652
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 99/395 (25%), Positives = 170/395 (43%), Gaps = 41/395 (10%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+ TL+ ++ A +A +++ + S + +P + T + I A P
Sbjct: 112 YTTLVTSFARAGHAARAVAVFRSML-----SENVVP---NEATLAGAITAFARCGAPATV 163
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
+H + V V T LV+ Y + L + LFD M RN VTWNVM+ G VK
Sbjct: 164 GMIHGFALQRALDGFVIVATNLVHAYAGVLELCSARALFDGMTYRNTVTWNVMLNGYVKA 223
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
++ A +F +P R+ VSW +IDGY + ++A+ + +MV E+ ++ +
Sbjct: 224 KMIDMAAEVFWRIPERDEVSWLTLIDGYICADLISDAMKAYVQMVGEVGANDYEVLLVDL 283
Query: 214 LPAIWQNGDVKSCQLIHGYGEKRGFTA----------------------FDIRV------ 245
+ A + V Q +H K GF A R+
Sbjct: 284 MKACARYSAVTEGQQLHTVILKNGFDAHAFVQATLVHFYGCCGLIGLAQMTFRLSDKSHT 343
Query: 246 --LNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQ 303
N L+ + G I A +LF+D+ ++ VSW+++ISG+ G A++ F M
Sbjct: 344 ASWNALLAALLRNGLIREARELFDDM--PERDTVSWSTMISGYVQTGRSDMALKLFYSML 401
Query: 304 KVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRL 363
++PN VT S L+A + G +++G D ++ L D G LIDM + G +
Sbjct: 402 NTSIEPNEVTLASALSAIADSGTLDQGKWIHDYIMNRPVQLTDNLSSG-LIDMYAKCGSI 460
Query: 364 EQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEM 398
A + + + + V W ++ + + HG M
Sbjct: 461 ADAVQFFNRVNDKFSSVSPWNAMICSLAIHGYAHM 495
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 141/280 (50%), Gaps = 22/280 (7%)
Query: 67 PLPPLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGF-QSHVYVNTALVNMYVSL-GF 124
PL P FL+ + + G QLHA+ +K G S+V+V ++++ Y L
Sbjct: 7 PLAP--------FLVASLKRAARLRCGEQLHALAAKSGLLASNVFVRNSVLSSYSRLPSS 58
Query: 125 LKDSSKLFDEMPE--RNLVTWNVMITGLVKWGELEFARSLFEEMPC--RNVVSWTGIIDG 180
L + +LFDE P R+ N ++ L + G L+ A+ L EEMP R+ VS+T ++
Sbjct: 59 LASALQLFDETPPPLRDATARNSVLAALTRAGYLDRAQGLLEEMPRIHRDAVSYTTLVTS 118
Query: 181 YTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTA 240
+ R + A+A+FR M++ E P+E T+ + A + G + +IHG+ +R
Sbjct: 119 FARAGHAARAVAVFRSMLS-ENVVPNEATLAGAITAFARCGAPATVGMIHGFALQRALDG 177
Query: 241 FDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFG 300
F I N L+ YA + SA LF+ ++ +N V+W +++G+ M A E F
Sbjct: 178 FVIVATN-LVHAYAGVLELCSARALFDGMTY--RNTVTWNVMLNGYVKAKMIDMAAEVFW 234
Query: 301 RMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEE 340
R+ + + V++L++++ L+ + + + +MV E
Sbjct: 235 RIP----ERDEVSWLTLIDGYICADLISDAMKAYVQMVGE 270
>gi|242067301|ref|XP_002448927.1| hypothetical protein SORBIDRAFT_05g001710 [Sorghum bicolor]
gi|241934770|gb|EES07915.1| hypothetical protein SORBIDRAFT_05g001710 [Sorghum bicolor]
Length = 572
Score = 254 bits (648), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 133/382 (34%), Positives = 220/382 (57%), Gaps = 5/382 (1%)
Query: 71 LFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSK 130
L D + ++ C + H G +H+ + + ++++AL+N+Y S ++ + K
Sbjct: 168 LSDQLILATVLSACGHIRHLRTGKSIHSYMLVSDILINAHLSSALINLYASCASMEMAEK 227
Query: 131 LFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEA 190
L++ MP ++LV+ M+ G + + E AR +F+ MP ++VVSW+ +I GY N+ NEA
Sbjct: 228 LYNGMPRKDLVSSTAMVFGYARNRKFEIARYIFDGMPEKDVVSWSAMISGYADSNQPNEA 287
Query: 191 LALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLI 250
L+LF M C P E+T+L+V+ A G + + IH + + G + + N LI
Sbjct: 288 LSLFNDMQECG-IRPDEVTMLSVISACANLGSLDKAKWIHAFIKNNGLNKI-LHICNALI 345
Query: 251 DTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPN 310
D +AKCG I A +F ++ +KN+++WTS+I+ FAMHG GK A+ F +M+ G++PN
Sbjct: 346 DMFAKCGGINLALNIFNEMP--QKNVITWTSMITAFAMHGDGKSALCLFEQMRNEGVEPN 403
Query: 311 RVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTA 370
VTFL++L AC H GLV EG + F MV++ + P +HYGC++D+LGRA +++A
Sbjct: 404 EVTFLNLLYACCHAGLVHEGRSLFSSMVQQYGIEPKHEHYGCMVDLLGRAKLMQEAVNLI 463
Query: 371 LGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRF 430
+ +V VW +LL AC HG++++G +KIL+++ + G VL+ I
Sbjct: 464 ESMHLR-PNVPVWGSLLAACWMHGDLKLGAFAAKKILQLDPNHDGASVLLSKIYMKSDNL 522
Query: 431 GDAERLRRVMDERNAFKVPGCS 452
DA+ +R VM + K G S
Sbjct: 523 NDAQEVRDVMKLQGVSKETGLS 544
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 81/313 (25%), Positives = 144/313 (46%), Gaps = 35/313 (11%)
Query: 97 HAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGEL 156
HA+ +VG +V TALV Y + G + D+ K+FD M R++V+W VM+ +
Sbjct: 93 HALAFRVGSLDDGFVRTALVGAYAACGCVGDARKVFDGMAVRDVVSWGVMLDSYCQTRNY 152
Query: 157 EFARSLFEEMPCRNVVSWTGIID------GYTRMNRSNEALALFRKMVACEYTEPSEITI 210
+ A F +M V+S I+ G+ R R+ +++ Y S+I I
Sbjct: 153 KEALLQFAKMKNSGVLSDQLILATVLSACGHIRHLRTGKSIH--------SYMLVSDILI 204
Query: 211 LAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDIS 270
A L + N + G D+ ++ YA+ A +F+
Sbjct: 205 NAHLSSALINLYASCASMEMAEKLYNGMPRKDLVSSTAMVFGYARNRKFEIARYIFD--G 262
Query: 271 VERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEG 330
+ K++VSW+++ISG+A EA+ F MQ+ G++P+ VT LSV++AC++ G +++
Sbjct: 263 MPEKDVVSWSAMISGYADSNQPNEALSLFNDMQECGIRPDEVTMLSVISACANLGSLDKA 322
Query: 331 L--------NFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVV 382
N +K++ C LIDM + G + A +P + +V+
Sbjct: 323 KWIHAFIKNNGLNKILHICNA---------LIDMFAKCGGINLALNIFNEMPQK--NVIT 371
Query: 383 WRTLLGACSFHGN 395
W +++ A + HG+
Sbjct: 372 WTSMITAFAMHGD 384
>gi|334188487|ref|NP_200728.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170817|sp|Q9FIF7.1|PP435_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g59200, chloroplastic; Flags: Precursor
gi|9759241|dbj|BAB09765.1| unnamed protein product [Arabidopsis thaliana]
gi|332009773|gb|AED97156.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 544
Score = 254 bits (648), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 140/390 (35%), Positives = 226/390 (57%), Gaps = 11/390 (2%)
Query: 65 HSPLPPLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGF 124
H+ + P D++ + +++ C + ++HA + K+GF S V ++ +Y G
Sbjct: 120 HNSVLP--DNYVITSVLKACDL----KVCREIHAQVLKLGFGSSRSVGLKMMEIYGKSGE 173
Query: 125 LKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRM 184
L ++ K+FDEMP+R+ V VMI + G ++ A LF+++ ++ V WT +IDG R
Sbjct: 174 LVNAKKMFDEMPDRDHVAATVMINCYSECGFIKEALELFQDVKIKDTVCWTAMIDGLVRN 233
Query: 185 NRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIR 244
N+AL LFR+M E +E T + VL A G ++ + +H + E + +
Sbjct: 234 KEMNKALELFREM-QMENVSANEFTAVCVLSACSDLGALELGRWVHSFVENQRMELSNF- 291
Query: 245 VLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQK 304
V N LI+ Y++CG I A ++F + K+++S+ ++ISG AMHG EA+ F M
Sbjct: 292 VGNALINMYSRCGDINEARRVFR--VMRDKDVISYNTMISGLAMHGASVEAINEFRDMVN 349
Query: 305 VGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLE 364
G +PN+VT +++LNACSHGGL++ GL F+ M V P I+HYGC++D+LGR GRLE
Sbjct: 350 RGFRPNQVTLVALLNACSHGGLLDIGLEVFNSMKRVFNVEPQIEHYGCIVDLLGRVGRLE 409
Query: 365 QAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNIL 424
+A + IP E D ++ TLL AC HGN+E+GE++ +++ E E G YVL+ N+
Sbjct: 410 EAYRFIENIPIE-PDHIMLGTLLSACKIHGNMELGEKIAKRLFESENPDSGTYVLLSNLY 468
Query: 425 AGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
A G++ ++ +R M + K PGCS +
Sbjct: 469 ASSGKWKESTEIRESMRDSGIEKEPGCSTI 498
>gi|414886077|tpg|DAA62091.1| TPA: methyltransferase small domain protein [Zea mays]
Length = 656
Score = 254 bits (648), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 130/373 (34%), Positives = 213/373 (57%), Gaps = 3/373 (0%)
Query: 80 LIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERN 139
L++ CA S G QLH VI K GF +H +V LV+ Y G + + F + +
Sbjct: 283 LMKACARYSAVTEGQQLHTVILKNGFDAHAFVQATLVHFYGCCGLIGLAQMTFRLSDKSH 342
Query: 140 LVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVA 199
+WN ++ L++ G + AR LF++MP R+ VSW+ +I GY + RS+ AL LF M+
Sbjct: 343 TASWNALLAALLRNGLIREARELFDDMPERDTVSWSTMISGYVQTGRSDMALKLFYSMLN 402
Query: 200 CEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCI 259
EP+E+T+ + L AI +G + + IH Y R D + + LID YAKCG I
Sbjct: 403 TS-IEPNEVTLASALSAIADSGTLDQGKWIHDYIMNRPVQLTD-NLSSGLIDMYAKCGSI 460
Query: 260 FSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLN 319
A + F ++ + ++ W ++I A+HG +++ F ++Q+ +KPN +TF+ VL+
Sbjct: 461 ADAVQFFNRVNDKFSSVSPWNAMICSLAIHGYAHMSLDLFSQLQRTSIKPNSITFIGVLS 520
Query: 320 ACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITD 379
AC H G V +G +F+ M E + P IKHYGC++D+LGRAG LE+AE+ +P + D
Sbjct: 521 ACCHAGTVTKGKYYFESMTREYGIQPTIKHYGCMVDLLGRAGYLEEAEQLVSMMPMK-PD 579
Query: 380 VVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRV 439
VV+W ++L A GNV +GER ++ ++++ +G + + NI A G + + +R+
Sbjct: 580 VVIWGSILSASRAQGNVALGERAAEELAKLDQTHGASKIALSNIYADAGHWINVSVVRKE 639
Query: 440 MDERNAFKVPGCS 452
+ + N ++ G S
Sbjct: 640 LQDANLERLTGRS 652
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 99/395 (25%), Positives = 170/395 (43%), Gaps = 41/395 (10%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+ TL+ ++ A +A +++ + S + +P + T + I A P
Sbjct: 112 YTTLVTSFARAGHAARAVAVFRSML-----SENVVP---NEATLAGAITAFARCGAPATV 163
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
+H + V V T LV+ Y + L + LFD M RN VTWNVM+ G VK
Sbjct: 164 GMIHGFALQRALDGFVIVATNLVHAYAGVLELCSARALFDGMTYRNTVTWNVMLNGYVKA 223
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
++ A +F +P R+ VSW +IDGY + ++A+ + +MV E+ ++ +
Sbjct: 224 KMIDMAAEVFWRIPERDEVSWLTLIDGYICADLISDAMKAYVQMVGEVGANDYEVLLVDL 283
Query: 214 LPAIWQNGDVKSCQLIHGYGEKRGFTA----------------------FDIRV------ 245
+ A + V Q +H K GF A R+
Sbjct: 284 MKACARYSAVTEGQQLHTVILKNGFDAHAFVQATLVHFYGCCGLIGLAQMTFRLSDKSHT 343
Query: 246 --LNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQ 303
N L+ + G I A +LF+D+ ++ VSW+++ISG+ G A++ F M
Sbjct: 344 ASWNALLAALLRNGLIREARELFDDM--PERDTVSWSTMISGYVQTGRSDMALKLFYSML 401
Query: 304 KVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRL 363
++PN VT S L+A + G +++G D ++ L D G LIDM + G +
Sbjct: 402 NTSIEPNEVTLASALSAIADSGTLDQGKWIHDYIMNRPVQLTDNLSSG-LIDMYAKCGSI 460
Query: 364 EQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEM 398
A + + + + V W ++ + + HG M
Sbjct: 461 ADAVQFFNRVNDKFSSVSPWNAMICSLAIHGYAHM 495
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 141/280 (50%), Gaps = 22/280 (7%)
Query: 67 PLPPLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGF-QSHVYVNTALVNMYVSL-GF 124
PL P FL+ + + G QLHA+ +K G S+V+V ++++ Y L
Sbjct: 7 PLAP--------FLVASLKRAARLRCGEQLHALAAKSGLLASNVFVRNSVLSSYSRLPSS 58
Query: 125 LKDSSKLFDEMPE--RNLVTWNVMITGLVKWGELEFARSLFEEMPC--RNVVSWTGIIDG 180
L + +LFDE P R+ N ++ L + G L+ A+ L EEMP R+ VS+T ++
Sbjct: 59 LASALQLFDETPPPLRDATARNSVLAALTRAGYLDRAQGLLEEMPRIHRDAVSYTTLVTS 118
Query: 181 YTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTA 240
+ R + A+A+FR M++ E P+E T+ + A + G + +IHG+ +R
Sbjct: 119 FARAGHAARAVAVFRSMLS-ENVVPNEATLAGAITAFARCGAPATVGMIHGFALQRALDG 177
Query: 241 FDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFG 300
F I N L+ YA + SA LF+ ++ +N V+W +++G+ M A E F
Sbjct: 178 FVIVATN-LVHAYAGVLELCSARALFDGMTY--RNTVTWNVMLNGYVKAKMIDMAAEVFW 234
Query: 301 RMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEE 340
R+ + + V++L++++ L+ + + + +MV E
Sbjct: 235 RIP----ERDEVSWLTLIDGYICADLISDAMKAYVQMVGE 270
>gi|242032459|ref|XP_002463624.1| hypothetical protein SORBIDRAFT_01g003150 [Sorghum bicolor]
gi|241917478|gb|EER90622.1| hypothetical protein SORBIDRAFT_01g003150 [Sorghum bicolor]
Length = 607
Score = 254 bits (648), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 164/487 (33%), Positives = 247/487 (50%), Gaps = 72/487 (14%)
Query: 1 MHILQNSQTPNNI--------TTQIHSHLLTTNSLLHHSQLFNTLLHFYSLA-----ESP 47
+H+L+ S P + + +H++ L L S L +A P
Sbjct: 31 LHLLERSSAPAAVLQSLAFLLKSGLHANPLVLTRLFASSAAAAPALLEPLVAALLRPSVP 90
Query: 48 QKAFLLYKQLQQIYTHSHSPLP----------PLF-------DSFTYSFLIRTCATL-SH 89
AFL+ I H+ SPLP PL + FT+ FL++ CA L
Sbjct: 91 IDAFLVN---TLIRAHAASPLPSARLRAAAFFPLMLRSAVLPNKFTFPFLLKACAALPGF 147
Query: 90 PNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLG--FLKDSSKLFDEMPERNLVTWNVMI 147
P +G Q HA K GF + YV+ L++MY G FL D
Sbjct: 148 PGVGLQAHAAALKFGFATDQYVSNTLIHMYSCFGGEFLGD-------------------- 187
Query: 148 TGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSE 207
AR++F+ M +VV+W+ +I GY R S++A+ LFR+M A P E
Sbjct: 188 -----------ARNVFDRMDKSSVVTWSAMIGGYVRGGLSSDAVGLFREMQA-SGVRPDE 235
Query: 208 ITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFE 267
+T++ VL A G ++ + + + E+ G + + N LID AKCG + A +F+
Sbjct: 236 VTVIGVLAAAADLGALELARWVGRFVEREGIGK-SVTLCNALIDALAKCGDVDGAVAVFQ 294
Query: 268 DISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLV 327
+E + +VSWTS+I AM G GKEAV F M+ G++P+ V F+ VL ACSH G+V
Sbjct: 295 --GMEERTVVSWTSVIDALAMEGRGKEAVAVFEAMKTAGVRPDDVVFIGVLTACSHAGMV 352
Query: 328 EEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLL 387
+EG +FD M E + P I+HYGC++DM GRAG +E+A + +P + + ++WRTL+
Sbjct: 353 DEGYGYFDSMKMEYGIDPKIEHYGCMVDMFGRAGMVERAMEFIHTMPMK-PNPIIWRTLV 411
Query: 388 GACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFK 447
AC HG +E+GE +TR +L + +YV++ N+ A R+ + +RR M +R K
Sbjct: 412 AACRAHGRLELGESITRNLLNEYPAHEANYVMLSNVYALTQRWKEKSEIRREMSKRGIKK 471
Query: 448 VPGCSLV 454
VPGCSLV
Sbjct: 472 VPGCSLV 478
>gi|225449732|ref|XP_002267472.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
Length = 1058
Score = 254 bits (648), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 139/390 (35%), Positives = 223/390 (57%), Gaps = 18/390 (4%)
Query: 70 PLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSS 129
P SFT + + CA + +G +H++ K G Q + YV L++MY G ++D S
Sbjct: 553 PSDSSFTSA--LSACANIGDVEIGRVIHSLAIKTGCQFNSYVMNGLISMYAKCGNVEDGS 610
Query: 130 KLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNE 189
+F + ++ V+WN +I+GL + L+ AR +FE+MP R+VVSWT II Y +
Sbjct: 611 HVFRTIRVKDTVSWNSLISGLSENYMLDDARVVFEKMPKRDVVSWTAIISAYVQAGHGEV 670
Query: 190 ALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCL 249
AL LF M+A +P+++T+ ++L A G +K + H K GF F + V N L
Sbjct: 671 ALDLFLDMLA-RGIKPNQLTVTSLLSACGNLGAIKLGEQFHALIFKLGFDTF-LFVGNSL 728
Query: 250 IDTYAKCG-----CIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQK 304
I Y KCG C+F + +L++W +++ G A +G+GKEA++ F +M+
Sbjct: 729 ITMYFKCGYEDGFCVFE--------EMPEHDLITWNAVLVGCAQNGLGKEAIKIFEQMEV 780
Query: 305 VGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLE 364
G+ P++++FL VL ACSH GLV+EG F+ M ++ ++P + HY C++D+LGRAG L
Sbjct: 781 EGILPDQMSFLGVLCACSHAGLVDEGWAHFNSMTQKYGIMPLVYHYTCMVDLLGRAGYLS 840
Query: 365 QAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNIL 424
+AE +P + D V+W LLGAC H NVE+G+RV ++ +M + YVL+ N+
Sbjct: 841 EAEALIENMPVK-PDSVIWEALLGACRIHRNVELGQRVAERLFQMTKPKSATYVLLSNLF 899
Query: 425 AGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
A G + +R++M ++ K PG S +
Sbjct: 900 ASQGMWDKVAEIRKLMKDQGLTKEPGISWI 929
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 114/436 (26%), Positives = 191/436 (43%), Gaps = 82/436 (18%)
Query: 70 PLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSS 129
P + ++++ +I A + QL+ + + V TA++ Y +G ++ +
Sbjct: 423 PERNEYSWTTMIAAFAQCGRLDDAIQLYERVP----EQTVATKTAMMTAYAQVGRIQKAR 478
Query: 130 KLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNE 189
+FDE+ N+V WN +I G + G L+ A+ LF++MP +N SW +I G+ + S E
Sbjct: 479 LIFDEILNPNVVAWNAIIAGYTQNGMLKEAKDLFQKMPVKNSASWAAMIAGFVQNEESRE 538
Query: 190 ALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCL 249
AL L ++ + PS+ + + L A GDV+ ++IH K G F+ V+N L
Sbjct: 539 ALELLIELHRSG-SVPSDSSFTSALSACANIGDVEIGRVIHSLAIKTG-CQFNSYVMNGL 596
Query: 250 IDTYAKCGCIFSASKLFEDISVE-----------------------------RKNLVSWT 280
I YAKCG + S +F I V+ ++++VSWT
Sbjct: 597 ISMYAKCGNVEDGSHVFRTIRVKDTVSWNSLISGLSENYMLDDARVVFEKMPKRDVVSWT 656
Query: 281 SIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLV------------- 327
+IIS + G G+ A++ F M G+KPN++T S+L+AC + G +
Sbjct: 657 AIISAYVQAGHGEVALDLFLDMLARGIKPNQLTVTSLLSACGNLGAIKLGEQFHALIFKL 716
Query: 328 ---------------------EEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAG--RLE 364
E+G F++M E + + GC + LG+ E
Sbjct: 717 GFDTFLFVGNSLITMYFKCGYEDGFCVFEEMPEHDLITWNAVLVGCAQNGLGKEAIKIFE 776
Query: 365 QAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMG----ERVTRKILEMERGYGGDYVLM 420
Q E + + D + + +L ACS G V+ G +T+K M Y Y M
Sbjct: 777 QMEVEGI-----LPDQMSFLGVLCACSHAGLVDEGWAHFNSMTQKYGIMPLVY--HYTCM 829
Query: 421 YNILAGVGRFGDAERL 436
++L G +AE L
Sbjct: 830 VDLLGRAGYLSEAEAL 845
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 98/359 (27%), Positives = 171/359 (47%), Gaps = 58/359 (16%)
Query: 114 ALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVS 173
A+++ YV G LK++ KLFDEMPE+N+ +WN ++TG + AR LF++MP RN VS
Sbjct: 269 AMISGYVQNGDLKNARKLFDEMPEKNVASWNSVVTGYCHCYRMSEARELFDQMPERNSVS 328
Query: 174 WTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYG 233
W +I GY ++ EA +F KM P + + VL AI D++ +
Sbjct: 329 WMVMISGYVHISDYWEAWDVFVKMCRT-VARPDQSIFVVVLSAITGLDDLELIGSLRPIA 387
Query: 234 EKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGK 293
K G+ D+ V + +++ Y + G + A FE ++ +N SWT++I+ FA G
Sbjct: 388 IKTGYEG-DVVVGSAILNAYTRNGSLDLAMHFFE--TMPERNEYSWTTMIAAFAQCGRLD 444
Query: 294 EAVENF---------------------GRMQKVG------LKPNRVTFLSVLNACSHGGL 326
+A++ + GR+QK L PN V + +++ + G+
Sbjct: 445 DAIQLYERVPEQTVATKTAMMTAYAQVGRIQKARLIFDEILNPNVVAWNAIIAGYTQNGM 504
Query: 327 VEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAE-KTAL----------GIPS 375
++E + F KM +K+ M+ AG ++ E + AL +PS
Sbjct: 505 LKEAKDLFQKM--------PVKNSASWAAMI--AGFVQNEESREALELLIELHRSGSVPS 554
Query: 376 EITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAE 434
+ + + + L AC+ G+VE+G RV L ++ G + +M +++ + G+ E
Sbjct: 555 DSS----FTSALSACANIGDVEIG-RVIHS-LAIKTGCQFNSYVMNGLISMYAKCGNVE 607
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/337 (22%), Positives = 154/337 (45%), Gaps = 54/337 (16%)
Query: 106 QSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEE 165
Q+H++ + LG ++++ ++F+EM +R++V+WN MI G + G+++ AR LF+
Sbjct: 168 QTHLFQCNTRIQELGRLGRVEEARRVFNEMIQRDVVSWNSMINGYSQNGKVDEARLLFDA 227
Query: 166 MPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKS 225
+N+ +WT ++ GY + R EA +F M TE + ++ A++ QNGD+K+
Sbjct: 228 FVGKNIRTWTILLTGYAKEGRIEEAREVFESM-----TERNVVSWNAMISGYVQNGDLKN 282
Query: 226 CQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISG 285
+ + ++ ++ N ++ Y C + A +LF+ + +N VSW +ISG
Sbjct: 283 ARKLFDEMPEKNVASW-----NSVVTGYCHCYRMSEARELFDQMP--ERNSVSWMVMISG 335
Query: 286 FAMHGMGKEAVENFGRMQKVGLKPNRVTFL------------------------------ 315
+ EA + F +M + +P++ F+
Sbjct: 336 YVHISDYWEAWDVFVKMCRTVARPDQSIFVVVLSAITGLDDLELIGSLRPIAIKTGYEGD 395
Query: 316 -----SVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTA 370
++LNA + G ++ ++FF+ M E E + +I + GRL+ A +
Sbjct: 396 VVVGSAILNAYTRNGSLDLAMHFFETMPERNEY-----SWTTMIAAFAQCGRLDDAIQLY 450
Query: 371 LGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKIL 407
+P + V ++ A + G ++ + +IL
Sbjct: 451 ERVPEQT--VATKTAMMTAYAQVGRIQKARLIFDEIL 485
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 81/318 (25%), Positives = 140/318 (44%), Gaps = 25/318 (7%)
Query: 134 EMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALAL 193
E P+ +L N I L + G +E AR +F EM R+VVSW +I+GY++ + +EA L
Sbjct: 165 ETPQTHLFQCNTRIQELGRLGRVEEARRVFNEMIQRDVVSWNSMINGYSQNGKVDEARLL 224
Query: 194 FRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTY 253
F V T +L + G ++ + + +R ++ N +I Y
Sbjct: 225 FDAFVGKNIR-----TWTILLTGYAKEGRIEEAREVFESMTERNVVSW-----NAMISGY 274
Query: 254 AKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVT 313
+ G + +A KLF+++ KN+ SW S+++G+ EA E F +M + N V+
Sbjct: 275 VQNGDLKNARKLFDEMP--EKNVASWNSVVTGYCHCYRMSEARELFDQMP----ERNSVS 328
Query: 314 FLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLE---QAEKTA 370
++ +++ H E + F KM PD + ++ + LE A
Sbjct: 329 WMVMISGYVHISDYWEAWDVFVKMCRTV-ARPDQSIFVVVLSAITGLDDLELIGSLRPIA 387
Query: 371 LGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRF 430
+ E DVVV +L A + +G++++ + E + M A GR
Sbjct: 388 IKTGYE-GDVVVGSAILNAYTRNGSLDLAMHFFETMPERNE---YSWTTMIAAFAQCGRL 443
Query: 431 GDAERL-RRVMDERNAFK 447
DA +L RV ++ A K
Sbjct: 444 DDAIQLYERVPEQTVATK 461
>gi|225423499|ref|XP_002274432.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 738
Score = 253 bits (647), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 132/316 (41%), Positives = 195/316 (61%), Gaps = 4/316 (1%)
Query: 139 NLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMV 198
NL N +I K G+L+ AR LFE + ++++SW +I GY+ MN EALALFRKM
Sbjct: 298 NLRLVNALIDMYSKCGDLDKARDLFEGICEKDIISWNVMIGGYSHMNSYKEALALFRKMQ 357
Query: 199 ACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGC 258
EP+++T +++LPA G + + IH Y +K+ + + LID YAKCG
Sbjct: 358 QSN-VEPNDVTFVSILPACAYLGALDLGKWIHAYIDKKFLGLTNTSLWTSLIDMYAKCGN 416
Query: 259 IFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVL 318
I +A ++F ++ K+L SW ++ISG AMHG A+E F +M+ G +P+ +TF+ VL
Sbjct: 417 IEAAKQVFA--GMKPKSLGSWNAMISGLAMHGHANMALELFRQMRDEGFEPDDITFVGVL 474
Query: 319 NACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEIT 378
+ACSH GLVE G F MVE+ ++ P ++HYGC+ID+LGRAG ++AE + +
Sbjct: 475 SACSHAGLVELGRQCFSSMVEDYDISPKLQHYGCMIDLLGRAGLFDEAEALMKNMEMK-P 533
Query: 379 DVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRR 438
D +W +LLGAC HGNVE+GE + + E+E G YVL+ NI A GR+ D R+R
Sbjct: 534 DGAIWGSLLGACRVHGNVELGEFAAKHLFELEPENPGAYVLLSNIYATAGRWDDVARIRT 593
Query: 439 VMDERNAFKVPGCSLV 454
++++ KVPGCS +
Sbjct: 594 KLNDKGMKKVPGCSSI 609
Score = 200 bits (508), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 123/406 (30%), Positives = 216/406 (53%), Gaps = 16/406 (3%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNL 92
++NT++ SL+ SP A Y ++ +S+T+ FL+++CA +
Sbjct: 99 IWNTMIRGNSLSSSPVGAIDFYVRMLLCGVEP--------NSYTFPFLLKSCAKVGATQE 150
Query: 93 GTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVK 152
G Q+H + K+G +S +V+T+L+NMY G L + +F + R+ V++ +ITG
Sbjct: 151 GKQIHGHVLKLGLESDPFVHTSLINMYAQNGELGYAELVFSKSSLRDAVSFTALITGYTL 210
Query: 153 WGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILA 212
G L+ AR LFEE+P R+ VSW +I GY + R EALA F++M P+E T++
Sbjct: 211 RGCLDDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRAN-VAPNESTMVT 269
Query: 213 VLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVE 272
VL A Q+G ++ + + E G + ++R++N LID Y+KCG + A LFE I
Sbjct: 270 VLSACAQSGSLELGNWVRSWIEDHGLGS-NLRLVNALIDMYSKCGDLDKARDLFEGIC-- 326
Query: 273 RKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLN 332
K+++SW +I G++ KEA+ F +MQ+ ++PN VTF+S+L AC++ G ++ G
Sbjct: 327 EKDIISWNVMIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKW 386
Query: 333 FFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSF 392
+ ++ L + + LIDM + G +E A++ G+ + + W ++ +
Sbjct: 387 IHAYIDKKFLGLTNTSLWTSLIDMYAKCGNIEAAKQVFAGMKPK--SLGSWNAMISGLAM 444
Query: 393 HGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRR 438
HG+ M + R++ + G+ D + +L+ G E R+
Sbjct: 445 HGHANMALELFRQM--RDEGFEPDDITFVGVLSACSHAGLVELGRQ 488
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 84/334 (25%), Positives = 155/334 (46%), Gaps = 22/334 (6%)
Query: 80 LIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYV--SLGFLKDSSKLFDEMPE 137
L+ TC + NL Q+H+ I K G + + + L+ G L + LF+ + +
Sbjct: 38 LLSTCKSFQ--NL-KQIHSQIIKTGLHNTQFALSKLIEFCAISPFGNLSYALLLFESIEQ 94
Query: 138 RNLVTWNVMITG----LVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALAL 193
N WN MI G G ++F + N ++ ++ ++ + E +
Sbjct: 95 PNQFIWNTMIRGNSLSSSPVGAIDFYVRMLLCGVEPNSYTFPFLLKSCAKVGATQEGKQI 154
Query: 194 FRKMVACEY-TEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDT 252
++ ++P T L + A QNG++ +L+ R +F LI
Sbjct: 155 HGHVLKLGLESDPFVHTSLINMYA--QNGELGYAELVFSKSSLRDAVSF-----TALITG 207
Query: 253 YAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRV 312
Y GC+ A +LFE+I V ++ VSW ++I+G+A G +EA+ F M++ + PN
Sbjct: 208 YTLRGCLDDARRLFEEIPV--RDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNES 265
Query: 313 TFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALG 372
T ++VL+AC+ G +E G N+ +E+ + +++ LIDM + G L++A G
Sbjct: 266 TMVTVLSACAQSGSLELG-NWVRSWIEDHGLGSNLRLVNALIDMYSKCGDLDKARDLFEG 324
Query: 373 IPSEITDVVVWRTLLGACSFHGNVEMGERVTRKI 406
I + D++ W ++G S + + + RK+
Sbjct: 325 ICEK--DIISWNVMIGGYSHMNSYKEALALFRKM 356
>gi|115487922|ref|NP_001066448.1| Os12g0233200 [Oryza sativa Japonica Group]
gi|77553539|gb|ABA96335.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113648955|dbj|BAF29467.1| Os12g0233200 [Oryza sativa Japonica Group]
Length = 704
Score = 253 bits (647), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 137/366 (37%), Positives = 219/366 (59%), Gaps = 10/366 (2%)
Query: 92 LGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLV 151
G LH +++ G V ++ ALV+M+ G ++ + ++FD M +++ +W M+
Sbjct: 263 FGIMLHKYVTEGGVARSVNLDNALVDMFGKCGCVRYAREVFDGMEVKDVYSWTSMVNAYA 322
Query: 152 KWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITIL 211
K G+LE A LF++MP RNVVSW+ +I Y+++N+ EA+ LFR+M+A +P + T++
Sbjct: 323 KCGDLESAEQLFKDMPRRNVVSWSCMIAAYSQLNQPEEAVWLFREMIAAG-VDPIDATLV 381
Query: 212 AVLPAIWQNGDVKSCQLIHG---YGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFED 268
+VL A Q G + + I+ K G T + + N LID +AKCG + ASKLF++
Sbjct: 382 SVLSACAQLGCLDLGRWIYENYIVSNKIGLT---VNLGNALIDMFAKCGDVGEASKLFDE 438
Query: 269 ISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVE 328
++ +N+VSW ++I A+HG +EA+ F +++ + P+++TFL +L +CSH GLV
Sbjct: 439 MA--ERNVVSWNTMIMAHAVHGQSEEAIRLFEQLKGENIVPDQITFLGLLASCSHSGLVS 496
Query: 329 EGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLG 388
EG +F +M + P ++HY C+ID+LG+ G LE+A + A G+P E D W LL
Sbjct: 497 EGRRYFKEMEMFYRIEPRVEHYACMIDLLGKVGLLEEAFEVARGMPME-ADEAGWGALLN 555
Query: 389 ACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKV 448
AC HGNVE+G V K++E++ G YVLM I A ++ + LR M +R K
Sbjct: 556 ACRMHGNVEIGACVADKLVELDPSDSGIYVLMSQIYASKNKWDQVKMLRMTMRDRGVKKN 615
Query: 449 PGCSLV 454
PGCS +
Sbjct: 616 PGCSSI 621
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 115/455 (25%), Positives = 195/455 (42%), Gaps = 84/455 (18%)
Query: 30 HSQLFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSH 89
++ + T++ + A P +A L++++ + LP D+ T+ F ++ A +
Sbjct: 100 NAYMLGTMMRGFLRARLPARALGLFRRVVR------DRLPA--DARTFVFAVKAAAAAAE 151
Query: 90 ------PNLGTQLHAVISKVGFQSH-VYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVT 142
P+ G +H K GF V V ALV+ Y + L D+ K+FDE
Sbjct: 152 SEHGGTPSGGEAIHCAALKCGFVGESVLVGNALVHFYANHKSLDDAGKVFDE-------- 203
Query: 143 WNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEY 202
MP R+VVSWT ++DGY R ++EA LF +MV
Sbjct: 204 -----------------------MPERDVVSWTTLVDGYARAGLADEAWRLFCRMVVVGG 240
Query: 203 TEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSA 262
P+ +T++A + AI Q G + ++H Y + G A + + N L+D + KCGC+ A
Sbjct: 241 MRPNAVTLVAAVSAIGQMGLLAFGIMLHKYVTEGG-VARSVNLDNALVDMFGKCGCVRYA 299
Query: 263 SKLFEDISVE-----------------------------RKNLVSWTSIISGFAMHGMGK 293
++F+ + V+ R+N+VSW+ +I+ ++ +
Sbjct: 300 REVFDGMEVKDVYSWTSMVNAYAKCGDLESAEQLFKDMPRRNVVSWSCMIAAYSQLNQPE 359
Query: 294 EAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCL 353
EAV F M G+ P T +SVL+AC+ G ++ G ++ + ++ + L
Sbjct: 360 EAVWLFREMIAAGVDPIDATLVSVLSACAQLGCLDLGRWIYENYIVSNKIGLTVNLGNAL 419
Query: 354 IDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGY 413
IDM + G + +A K + +VV W T++ A + HG E R + E +G
Sbjct: 420 IDMFAKCGDVGEASKLFDEMAER--NVVSWNTMIMAHAVHGQSEEAIR----LFEQLKGE 473
Query: 414 G--GDYVLMYNILAGVGRFGDAERLRRVMDERNAF 446
D + +LA G RR E F
Sbjct: 474 NIVPDQITFLGLLASCSHSGLVSEGRRYFKEMEMF 508
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 116/246 (47%), Gaps = 11/246 (4%)
Query: 167 PCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIW-----QNG 221
P N ++ G+ R AL LFR++V + + AV A G
Sbjct: 97 PGPNAYMLGTMMRGFLRARLPARALGLFRRVVRDRLPADARTFVFAVKAAAAAAESEHGG 156
Query: 222 DVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTS 281
+ IH K GF + V N L+ YA + A K+F+++ +++VSWT+
Sbjct: 157 TPSGGEAIHCAALKCGFVGESVLVGNALVHFYANHKSLDDAGKVFDEMP--ERDVVSWTT 214
Query: 282 IISGFAMHGMGKEAVENFGRMQKV-GLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEE 340
++ G+A G+ EA F RM V G++PN VT ++ ++A GL+ G+ K V E
Sbjct: 215 LVDGYARAGLADEAWRLFCRMVVVGGMRPNAVTLVAAVSAIGQMGLLAFGI-MLHKYVTE 273
Query: 341 CEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGE 400
V + L+DM G+ G + A + G+ E+ DV W +++ A + G++E E
Sbjct: 274 GGVARSVNLDNALVDMFGKCGCVRYAREVFDGM--EVKDVYSWTSMVNAYAKCGDLESAE 331
Query: 401 RVTRKI 406
++ + +
Sbjct: 332 QLFKDM 337
>gi|449433085|ref|XP_004134328.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Cucumis sativus]
Length = 601
Score = 253 bits (647), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 128/341 (37%), Positives = 207/341 (60%), Gaps = 7/341 (2%)
Query: 115 LVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSW 174
+++ YV +G + D+ KLFDEMPERN+V+W+ M+ G K G++E AR LF++MP +N+VSW
Sbjct: 224 MLDGYVKVGKMDDAFKLFDEMPERNVVSWSTMVLGYCKAGDMEMARMLFDKMPVKNLVSW 283
Query: 175 TGIIDGYTRMNRSNEALALFRKM-VACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYG 233
T I+ G+ + EA++LF +M AC + T++++L A ++G + + IH
Sbjct: 284 TIIVSGFAEKGLAREAISLFDQMEKACLKLDNG--TVMSILAACAESGLLGLGEKIHASI 341
Query: 234 EKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGK 293
+ F + N L+D YAKCG + A +F DI + K++VSW +++ G AMHG G
Sbjct: 342 KNNNFKC-TTEISNALVDMYAKCGRLNIAYDVFNDI--KNKDVVSWNAMLQGLAMHGHGV 398
Query: 294 EAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCL 353
+A+E F RM++ G PN+VT + VL AC+H GL+++G+ +F M + ++P+++HYGC+
Sbjct: 399 KALELFKRMKEEGFSPNKVTMIGVLCACTHAGLIDDGIRYFSTMERDYTLVPEVEHYGCM 458
Query: 354 IDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGY 413
+D+LGR GRLE+A + +P + ++W TLLGAC H VE+ V ++E+E
Sbjct: 459 VDLLGRKGRLEEAIRLIRNMPMA-PNAIIWGTLLGACRMHNAVELAREVLDHLVELEPTD 517
Query: 414 GGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
G++ ++ NI A G + R M K G S +
Sbjct: 518 SGNFSMLSNIYAAAGDWNCVANTRLRMRSIGTKKPSGASSI 558
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 131/273 (47%), Gaps = 38/273 (13%)
Query: 155 ELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKM-----VACEYTEPSEIT 209
++ A + F ++ NV + +I ++ ++ ++A A F M A +T P +
Sbjct: 67 QMLLATNAFNQVQYPNVHLYNTMIRAHSHNSQPSQAFATFFAMQRDGHYADNFTFPFLLK 126
Query: 210 ILA---VLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGC--IFSASK 264
+ LP I + +H EK GF + D+ V N LID+Y+KCG I +A K
Sbjct: 127 VCTGNVWLPVI---------ESVHAQIEKFGFMS-DVFVPNSLIDSYSKCGSCGISAAKK 176
Query: 265 LFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRM-QKVGLKPNRVTFLSVLNACSH 323
LF + R+++VSW S+ISG A G+ +EA + F M +K G+ N ++L+
Sbjct: 177 LFVSMGA-RRDVVSWNSMISGLAKGGLYEEARKVFDEMPEKDGISWN-----TMLDGYVK 230
Query: 324 GGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVW 383
G +++ FD+M E ++ + ++ +AG +E A +P + ++V W
Sbjct: 231 VGKMDDAFKLFDEMPER-----NVVSWSTMVLGYCKAGDMEMARMLFDKMP--VKNLVSW 283
Query: 384 RTLLGACSFHG----NVEMGERVTRKILEMERG 412
++ + G + + +++ + L+++ G
Sbjct: 284 TIIVSGFAEKGLAREAISLFDQMEKACLKLDNG 316
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 104/248 (41%), Gaps = 35/248 (14%)
Query: 72 FDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKL 131
D+ T ++ CA LG ++HA I F+ ++ ALV+MY G L + +
Sbjct: 313 LDNGTVMSILAACAESGLLGLGEKIHASIKNNNFKCTTEISNALVDMYAKCGRLNIAYDV 372
Query: 132 FDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEAL 191
F+++ +++V+WN M+ GL G G+ +AL
Sbjct: 373 FNDIKNKDVVSWNAMLQGLAMHGH--------------------GV-----------KAL 401
Query: 192 ALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLID 251
LF++M E P+++T++ VL A G + E+ ++ C++D
Sbjct: 402 ELFKRMKE-EGFSPNKVTMIGVLCACTHAGLIDDGIRYFSTMERDYTLVPEVEHYGCMVD 460
Query: 252 TYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNR 311
+ G + A +L ++ + N + W +++ MH + A E + V L+P
Sbjct: 461 LLGRKGRLEEAIRLIRNMPMA-PNAIIWGTLLGACRMHNAVELAREVLDHL--VELEPTD 517
Query: 312 VTFLSVLN 319
S+L+
Sbjct: 518 SGNFSMLS 525
>gi|326513504|dbj|BAJ87771.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326524908|dbj|BAK04390.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 505
Score = 253 bits (647), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 148/446 (33%), Positives = 255/446 (57%), Gaps = 26/446 (5%)
Query: 17 IHSHLLTTNSLLHHSQLF-NTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSF 75
+ +HL +S H F NTL+ + + SP A L+ +++ +P D+F
Sbjct: 69 LSAHLPFISSASSHPAFFYNTLMRGLAASSSPGDAIGLFAAMRRA---GAAP-----DAF 120
Query: 76 TYSFLIRTCATL-SHPNLGTQLHAVISKVG----FQSHVYVNTALVNMYVSLGFLKDSSK 130
T++F++++C+ S L + LHA + G +H +V+ AL++ Y + D+ +
Sbjct: 121 TFTFVLKSCSRCPSGRRLPSDLHAQAIRHGCLGELSAHTHVHNALLHAYACRAAVDDACR 180
Query: 131 LFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEA 190
+F+E+P R++V+++ ++T +K +L AR +F++MP R+VVSWT +I Y + R EA
Sbjct: 181 VFEEIPVRDVVSFSGLLTAHLKANDLHAARLVFDQMPHRDVVSWTAMISAYAKACRPQEA 240
Query: 191 LALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLI 250
LALF M +P E+T+++++ A GD+ + + + + + GF + + + N L+
Sbjct: 241 LALFDAMP----MQPDEVTMVSIVSACTTLGDLATGERVRRHIDSLGF-GWMVSLRNALM 295
Query: 251 DTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVG--LK 308
D YAKCG + A LF+ ++V ++L SW ++IS +A HG + F +M G +K
Sbjct: 296 DMYAKCGSLPEARALFDGMTV--RSLASWNTLISAYASHGDLDNTIAVFYQMLAEGNTVK 353
Query: 309 PNRVTFLSVLNACSHGGLVEEGLNFFDKMVEE--CEVLPDIKHYGCLIDMLGRAGRLEQA 366
P+ VT L++L A +H G VEEG F+ M +V ++HYGC++DMLGRAG+LE+A
Sbjct: 354 PDGVTLLALLIAYTHKGCVEEGRAMFNAMQRGNFGKVELTVEHYGCVVDMLGRAGKLEEA 413
Query: 367 EKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAG 426
+ +P ++ V+W LLGAC HG+++M ER +++ + GG Y+L+ ++ A
Sbjct: 414 YQVIEQMPIP-SNAVIWGALLGACRTHGDIDMAERAVKELRNLNPEEGGYYILLSDMYAS 472
Query: 427 VGRFGDAERLRRVMDERNAFKVPGCS 452
GR +A +R M+ER K G S
Sbjct: 473 AGRIAEATEIRHAMNERGVQKTTGRS 498
>gi|359478499|ref|XP_003632122.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 577
Score = 253 bits (647), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 146/441 (33%), Positives = 231/441 (52%), Gaps = 66/441 (14%)
Query: 76 TYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLK--------- 126
++S ++R+CA LG H I K+GF+ + + T L++ Y +G LK
Sbjct: 12 SFSLILRSCAISGEAQLGEAFHCQIMKMGFEYDMILQTGLLDFYAKVGDLKCAKRVFMGM 71
Query: 127 ----------------------DSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFE 164
++ LFD M ERN +WN MIT K G++ AR +F+
Sbjct: 72 PRRDVVANNAMISALSKHGYVEEARNLFDNMTERNSCSWNSMITCYCKLGDINSARLMFD 131
Query: 165 EMPCRNVVSWTGIIDGYTRMNRSNEALALFRKM----------------VAC-------- 200
P ++VVSW IIDGY + + A LF M V C
Sbjct: 132 CNPVKDVVSWNAIIDGYCKSKQLVAAQELFLLMGSARNSVTWNTMISAYVQCGEFGTAIS 191
Query: 201 -------EYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTY 253
E +P+E+T++++L A G + + IHGY + D+ + N LID Y
Sbjct: 192 MFQQMQSENVKPTEVTMVSLLSACAHLGALDMGEWIHGYIRTKRLK-IDVVLGNALIDMY 250
Query: 254 AKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVT 313
KCG + +A +F +S RKN+ W SII G M+G G+EA+ F M+K G+KP+ VT
Sbjct: 251 CKCGALEAAIDVFHGLS--RKNIFCWNSIIVGLGMNGRGEEAIAAFIVMEKEGIKPDGVT 308
Query: 314 FLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGI 373
F+ +L+ CSH GL+ G +F +M+ + P ++HYGC++D+LGRAG L++A + +
Sbjct: 309 FVGILSGCSHSGLLSAGQRYFSEMLGVYGLEPGVEHYGCMVDLLGRAGYLKEALELIRAM 368
Query: 374 PSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDA 433
P + +V+ +LL AC H + ++GE+VT+++LE++ GG+YV + N+ A + R+ D
Sbjct: 369 PMKPNSMVLG-SLLRACQIHKDTKLGEQVTQQLLELDPCDGGNYVFLSNLYASLSRWDDV 427
Query: 434 ERLRRVMDERNAFKVPGCSLV 454
R++M +R K PGCS +
Sbjct: 428 NTCRKLMIKRGVHKTPGCSSI 448
>gi|297739586|emb|CBI29768.3| unnamed protein product [Vitis vinifera]
Length = 676
Score = 253 bits (647), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 153/464 (32%), Positives = 242/464 (52%), Gaps = 51/464 (10%)
Query: 30 HSQLFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSH 89
+S L NT+L Y+ A +A LY +Q++ ++FTY F+++ CA+
Sbjct: 96 NSFLCNTMLRAYANAGRSYEAIDLYIYMQRMGVG--------VNNFTYPFVLKVCASELG 147
Query: 90 PNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMIT- 148
G +H + + GF S ++V ALV+MY G + D+ ++FD M R++V W MIT
Sbjct: 148 AVFGEVVHGQVVRTGFGSDLFVEAALVDMYAKCGEIGDAHEVFDRMLIRDVVCWTAMITL 207
Query: 149 ------------------------------------GLVKWGELEFARS--LFEEMPCRN 170
G + G + +R+ +F+ M RN
Sbjct: 208 YEQAERPLKALMLFRKMQEEGFLGDEITAISVASAVGQLGDGRMAISRARLVFDRMEERN 267
Query: 171 VVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIH 230
+SW ++ GYT+ R +AL+LF +M A E +P+ +T L ++ A G + +H
Sbjct: 268 GISWNSMLSGYTQNGRPTDALSLFNQMQASE-CDPNPVTALIMVSACSYLGSKHLGRKLH 326
Query: 231 GYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHG 290
+ D + N ++D Y KCG + +A ++F + + +++ SW +ISG+ +HG
Sbjct: 327 NFVISSKMD-IDTTLRNAIMDMYMKCGDLDTAVEMFNNCELGERDVSSWNVLISGYGVHG 385
Query: 291 MGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHY 350
GKEA+E F RMQ G++PN +TF S+L+ACSH GL++EG F M + V P++KHY
Sbjct: 386 HGKEALELFSRMQVEGVEPNDITFTSILSACSHAGLIDEGRKCFADMT-KLSVRPEMKHY 444
Query: 351 GCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEME 410
C++DMLGRAG L +A + IPS +D VW LL AC HGN E+GE + ++E
Sbjct: 445 ACMVDMLGRAGFLNEAFRLIKKIPSRPSD-EVWGALLLACRIHGNTELGEIAANNLFQLE 503
Query: 411 RGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
+ G YVLM NI A ++ + E +R+ M R K S++
Sbjct: 504 PEHTGYYVLMSNIYAASNKWKEVEMVRQNMKSRGLKKPAAFSVI 547
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 99/247 (40%), Gaps = 48/247 (19%)
Query: 227 QLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFE------DISVERKNLVSWT 280
+LIH RGF L LI Y+K G + SA LF+ + N
Sbjct: 42 KLIHSSLSTRGFLLHTPHFLARLIILYSKLGDLHSARTLFDHRHHHHHGHTQAPNSFLCN 101
Query: 281 SIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACS-----------HGGLVEE 329
+++ +A G EA++ + MQ++G+ N T+ VL C+ HG +V
Sbjct: 102 TMLRAYANAGRSYEAIDLYIYMQRMGVGVNNFTYPFVLKVCASELGAVFGEVVHGQVVRT 161
Query: 330 GLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGA 389
G D VE L+DM + G + A + + I DVV W ++
Sbjct: 162 GFG-SDLFVE-----------AALVDMYAKCGEIGDAHEVFDRML--IRDVVCWTAMITL 207
Query: 390 CSFHGNVEMGERVTRKIL----EMERGYGGDYVLMYNILAGVGRFGDAE----RLRRV-- 439
E ER + ++ E G+ GD + ++ + VG+ GD R R V
Sbjct: 208 ------YEQAERPLKALMLFRKMQEEGFLGDEITAISVASAVGQLGDGRMAISRARLVFD 261
Query: 440 -MDERNA 445
M+ERN
Sbjct: 262 RMEERNG 268
>gi|297741948|emb|CBI33393.3| unnamed protein product [Vitis vinifera]
Length = 752
Score = 253 bits (646), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 133/336 (39%), Positives = 205/336 (61%), Gaps = 6/336 (1%)
Query: 119 YVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGII 178
+ G + ++ +LFD+MP RN+V WN MI V+ ++ A SLF EMP +N +SWT +I
Sbjct: 130 FARFGKIAEARRLFDQMPIRNVVAWNAMIAAYVQNCHVDEAISLFMEMPEKNSISWTTVI 189
Query: 179 DGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGF 238
+GY RM + +EA L +M +P + T L + ++ + +H K G+
Sbjct: 190 NGYVRMGKLDEARQLLNQMPY--RNKPDQSTFACGLSSCAHLAALQVGKQLHQLVMKSGY 247
Query: 239 TAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVEN 298
A D+ V N LI YAKCG I SA LF+DI + ++VSW S+I+ +A++G G+EA++
Sbjct: 248 -ATDLFVSNALITMYAKCGSISSAELLFKDI--DHFDVVSWNSLIAAYALNGNGREALKL 304
Query: 299 FGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLG 358
F +M+ G+ P+ VTF+ +L+ACSH GL+++GL F MV+ + P +HY C++D+LG
Sbjct: 305 FHKMEVEGVAPDEVTFVGILSACSHVGLIDQGLKLFKCMVQAYNIEPLAEHYACMVDLLG 364
Query: 359 RAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYV 418
RAGRLE+A + G+ + +W LLGAC HGN+E+ + K+LE E +YV
Sbjct: 365 RAGRLEEAFQLVRGMKIN-ANAGIWGALLGACRIHGNLELAKFAAEKLLEFEPHKTSNYV 423
Query: 419 LMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
L+ N+ A GR+ + R+RR+M E+ A K PG S +
Sbjct: 424 LLSNMQAEAGRWDEVARVRRLMKEKGAEKQPGWSWI 459
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 87/320 (27%), Positives = 147/320 (45%), Gaps = 20/320 (6%)
Query: 113 TALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVV 172
A+V Y ++ +LFD MP ++LV+WN M+TG + GE+ FEEM R+VV
Sbjct: 31 NAMVAGYAKNRQFDEARRLFDAMPAKDLVSWNSMLTGYTRNGEMRLGLQFFEEMAERDVV 90
Query: 173 SWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGY 232
SW ++DG+ + N + F K+ P+ ++ + +L + G + + +
Sbjct: 91 SWNLMVDGFVEVGDLNSSWEFFEKI-----PNPNTVSWVTMLCGFARFGKIAEARRLFDQ 145
Query: 233 GEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMG 292
R A+ N +I Y + + A LF + + KN +SWT++I+G+ G
Sbjct: 146 MPIRNVVAW-----NAMIAAYVQNCHVDEAISLF--MEMPEKNSISWTTVINGYVRMGKL 198
Query: 293 KEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGC 352
EA + +M KP++ TF L++C+H ++ G ++V + D+
Sbjct: 199 DEARQLLNQMPYRN-KPDQSTFACGLSSCAHLAALQVGKQ-LHQLVMKSGYATDLFVSNA 256
Query: 353 LIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEME-R 411
LI M + G + AE I + DVV W +L+ A + +GN G + +ME
Sbjct: 257 LITMYAKCGSISSAELLFKDI--DHFDVVSWNSLIAAYALNGN---GREALKLFHKMEVE 311
Query: 412 GYGGDYVLMYNILAGVGRFG 431
G D V IL+ G
Sbjct: 312 GVAPDEVTFVGILSACSHVG 331
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 70/137 (51%), Gaps = 4/137 (2%)
Query: 73 DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLF 132
D T++ + +CA L+ +G QLH ++ K G+ + ++V+ AL+ MY G + + LF
Sbjct: 215 DQSTFACGLSSCAHLAALQVGKQLHQLVMKSGYATDLFVSNALITMYAKCGSISSAELLF 274
Query: 133 DEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNV----VSWTGIIDGYTRMNRSN 188
++ ++V+WN +I G A LF +M V V++ GI+ + + +
Sbjct: 275 KDIDHFDVVSWNSLIAAYALNGNGREALKLFHKMEVEGVAPDEVTFVGILSACSHVGLID 334
Query: 189 EALALFRKMVACEYTEP 205
+ L LF+ MV EP
Sbjct: 335 QGLKLFKCMVQAYNIEP 351
>gi|225430410|ref|XP_002282982.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070
[Vitis vinifera]
Length = 599
Score = 253 bits (646), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 157/525 (29%), Positives = 258/525 (49%), Gaps = 96/525 (18%)
Query: 13 ITTQIHSHLLTTNSLLHHSQLFN-----------TLLHFYSLAESPQKAFLLYKQLQQIY 61
I T+I + L+ L + +Q+FN ++ YS +++P A +Y +++
Sbjct: 40 IITKIINSFLSHACLDYATQVFNQTQEPDGFIYNAMIRAYSSSQTPCVAISIYNKMRACQ 99
Query: 62 THSHSPLPPLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNM--- 118
L D +TY F+ + CA+ G ++H VI ++G++ ++ ++L+N
Sbjct: 100 N-------ILGDKYTYPFVFKACASQFAVEKGKEVHGVIVRIGYELDGFLQSSLLNFYMV 152
Query: 119 ----------------------------YVSLGFLKDSSKLFDEMPERNLVTWN------ 144
Y G + DS +F EM E V N
Sbjct: 153 CGEIGNAQQVFDEFDAKDVVFWNALITGYARQGMVLDSFGVFKEMVEVKEVRPNEGTMMG 212
Query: 145 -----------------------------------VMITGLVKWGELEFARSLFEEMPCR 169
+I VK G L+ AR LF+E+P +
Sbjct: 213 LIVACIESKNLKLGRAIHGYMMKDMVLREGVKLEAALINLYVKCGYLDGARKLFDEIPEK 272
Query: 170 NVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLI 229
N V W +I GY ++ NE + L R+M +P T+ VL A Q G +
Sbjct: 273 NTVVWNSLICGYCQIGSLNEVIELLREM-HLSNLKPDRFTVSGVLSACAQMGAFNLGNWV 331
Query: 230 HGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMH 289
H + EK+G +D+ + LID YAKCG I +A K+F+ ++ +N+ +W +I+SG+A H
Sbjct: 332 HRFAEKKGI--WDVFIGTALIDMYAKCGFIGAARKVFDQMN--ERNVATWNAILSGYASH 387
Query: 290 GMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKH 349
G + A+E F M++ G +P+ +TFL+VL+AC+H GLVE G +FD M++ ++ P ++H
Sbjct: 388 GQAESAIELFSEMRESGARPDSITFLAVLHACAHSGLVENGKQYFDLMLQYYKIPPRVEH 447
Query: 350 YGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEM 409
YGC++D+LGRAG L++A + + E +VVVW LL ACS HGN+E+GE ++++
Sbjct: 448 YGCMVDLLGRAGLLQEARELIKMMVVE-PNVVVWGALLSACSIHGNIEIGEWAAHHMIKL 506
Query: 410 ERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
GG YV++ N+ A RF + +R +M E+ K GCS++
Sbjct: 507 NAMDGGSYVILANLYASAQRFNRVKAVREMMVEKGICKSHGCSMI 551
>gi|359492781|ref|XP_002278504.2| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 658
Score = 253 bits (646), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 129/358 (36%), Positives = 219/358 (61%), Gaps = 5/358 (1%)
Query: 97 HAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGEL 156
H+V ++ ++ V N+ +++ YV +G ++ + +F +MPE+ +V+W MI+G G+L
Sbjct: 192 HSVFEQMPLRNEVSWNS-MISGYVRIGDVRAAQSIFYQMPEKTVVSWTAMISGYATNGDL 250
Query: 157 EFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPA 216
+ A ++F MP +NVVSW +I GY + ++AL +F M+ P + T++++L A
Sbjct: 251 KSAENIFNHMPVKNVVSWNAMISGYVHNHEFDQALCVFHHMLINGECRPDQTTLISILSA 310
Query: 217 IWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNL 276
G ++ + I+ Y +K I + N LID +AKCG + +A ++F +S ++ +
Sbjct: 311 CAHLGSLEHGKWINSYIKKNKL-HLSIPLGNALIDMFAKCGDVENAKEVFHHMS--KRCI 367
Query: 277 VSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDK 336
++WT+++SG A++G +EA+ F +M G KP+ V F++VL+AC+HGGLVEEG FD+
Sbjct: 368 ITWTTMVSGLAVNGKCREAINLFDKMCLEGTKPDDVIFIAVLSACTHGGLVEEGKRVFDQ 427
Query: 337 MVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNV 396
MV+E + P I+HYGC++D+LGRAG+LE+A + + + + V+W TLL C HGN
Sbjct: 428 MVQEFGIKPRIEHYGCMVDLLGRAGKLEEAVRFTARMHLK-PNAVIWATLLFCCKIHGNG 486
Query: 397 EMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
++ + VT KI++ E L+ N+ A GR+ D R M ++ KVPGCS +
Sbjct: 487 DLLKSVTEKIMDQEPSNPSYLTLVSNLSASFGRWEDVLSFRVAMRQQRMEKVPGCSSI 544
>gi|297735486|emb|CBI17926.3| unnamed protein product [Vitis vinifera]
Length = 602
Score = 253 bits (646), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 138/424 (32%), Positives = 239/424 (56%), Gaps = 17/424 (4%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNL 92
L+ ++ Y P+KA L++ ++++ L P D S ++ C L +
Sbjct: 159 LWTLIIRAYVCVTFPEKALELFRTMREV------GLTP--DMVAISTVVSACGLLGDLGV 210
Query: 93 GTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVK 152
+H I K G + +V++ L++ Y G L + + F E P +N+V WN MI V+
Sbjct: 211 AKAMHCFIEKSGIEVDAFVSSTLISTYGECGSLDYAYRFFQETPMKNIVVWNTMIHQSVE 270
Query: 153 WGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYT--EPSEITI 210
LE + LF+ MP R+VVSW +I G+ R+ + EAL F +M E++ P+ +T+
Sbjct: 271 HNNLELGKQLFQSMPDRDVVSWNSMIGGFARIGQYQEALTWFHEM---EFSGVSPNALTL 327
Query: 211 LAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDIS 270
L+ L A +G + + IH Y +K D + + LID Y+KCG I A ++FE+ +
Sbjct: 328 LSTLSACASHGALDTGAWIHAYVDKNDMNR-DGSLDSSLIDMYSKCGDIDKAVQIFEEST 386
Query: 271 VERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEG 330
R++L +WTSI+ G AMHG G++A+ F +M++ ++P+ VT + VL+AC+H GL+++G
Sbjct: 387 --RRDLFTWTSIVCGLAMHGRGEKALHYFSKMKEAQVQPDDVTMVGVLSACAHAGLLDQG 444
Query: 331 LNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGAC 390
+F M + ++P ++HYGC++D+LGR G L++A +G+P E + ++W L AC
Sbjct: 445 WWYFQSMEKVFGLVPKVEHYGCMVDLLGRMGCLKEAYDLIMGMPMEANE-IIWGAFLSAC 503
Query: 391 SFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPG 450
H NVE+GE R++L ++ V++ N+ A ++ + LR+ + ++ K PG
Sbjct: 504 RVHNNVELGEVAARRLLGLDPRDPWARVMLSNMYAEEAKWDRSMGLRKEIKKKGLKKSPG 563
Query: 451 CSLV 454
CS +
Sbjct: 564 CSSI 567
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 100/385 (25%), Positives = 161/385 (41%), Gaps = 67/385 (17%)
Query: 76 TYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEM 135
T+ +L++ + G ++HA + + GF +V+ AL+ YV+ G + ++FDEM
Sbjct: 93 TFMYLLKALVSGQEVKEGEEVHASVVRTGFACSEFVSGALLGFYVACGLVGKGRQVFDEM 152
Query: 136 PERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFR 195
+ LV W + II Y + +AL LFR
Sbjct: 153 RQPGLVLWTL-------------------------------IIRAYVCVTFPEKALELFR 181
Query: 196 KMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAK 255
M T P + I V+ A GD+ + +H + EK G D V + LI TY +
Sbjct: 182 TMREVGLT-PDMVAISTVVSACGLLGDLGVAKAMHCFIEKSGIEV-DAFVSSTLISTYGE 239
Query: 256 CGCIFSASKLFEDI--------------SVERKNL---------------VSWTSIISGF 286
CG + A + F++ SVE NL VSW S+I GF
Sbjct: 240 CGSLDYAYRFFQETPMKNIVVWNTMIHQSVEHNNLELGKQLFQSMPDRDVVSWNSMIGGF 299
Query: 287 AMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPD 346
A G +EA+ F M+ G+ PN +T LS L+AC+ G ++ G + V++ ++ D
Sbjct: 300 ARIGQYQEALTWFHEMEFSGVSPNALTLLSTLSACASHGALDTG-AWIHAYVDKNDMNRD 358
Query: 347 IKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKI 406
LIDM + G +++A + S D+ W +++ + HG E K+
Sbjct: 359 GSLDSSLIDMYSKCGDIDKA--VQIFEESTRRDLFTWTSIVCGLAMHGRGEKALHYFSKM 416
Query: 407 LEMERGYGGDYVLMYNILAGVGRFG 431
E + D V M +L+ G
Sbjct: 417 KEAQ--VQPDDVTMVGVLSACAHAG 439
>gi|225453406|ref|XP_002271824.1| PREDICTED: pentatricopeptide repeat-containing protein At2g44880
[Vitis vinifera]
gi|297734603|emb|CBI16654.3| unnamed protein product [Vitis vinifera]
Length = 577
Score = 253 bits (646), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 159/484 (32%), Positives = 246/484 (50%), Gaps = 74/484 (15%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNL 92
L N+++ Y ++F LY+ L++ S +P DSFT+S L ++CA
Sbjct: 54 LCNSMIKAYVGMRQYSESFALYRDLRR--NTSFTP-----DSFTFSVLAKSCALNMAIWE 106
Query: 93 GTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTW--------- 143
G ++H+ + VGF +Y TALV+MY G + + KLFDEM +R+ V+W
Sbjct: 107 GQEIHSHVVAVGFCLDLYAATALVDMYAKFGKMDCARKLFDEMIDRSQVSWTALIGGYVR 166
Query: 144 ----------------------NVMITGLVKWGELEFARSLFEEMPCRNVVSWT------ 175
N MI VK G++ AR LF+EMP R+VVSWT
Sbjct: 167 SGDMDNAGKLFDQMIEKDSAAFNTMIDAYVKLGDMCSARKLFDEMPERSVVSWTIMIYGY 226
Query: 176 -------------------------GIIDGYTRMNRSNEALALFRKMVACEYTEPSEITI 210
+I GY + + EAL LF +M + EP E+TI
Sbjct: 227 SSNGNLDSARSLFDAMPEKNLFSWNAMISGYRQNKQPYEALKLFHEMQSTTSLEPDEVTI 286
Query: 211 LAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDIS 270
++VLPAI G + +H + ++ V LID YAKCG I + +F+++
Sbjct: 287 VSVLPAIADLGALDLGGWVHRFVRRKKLDR-ATNVGTALIDMYAKCGEIVKSRGVFDNMP 345
Query: 271 VERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEG 330
K SW ++I+ FA++G KEA+ F M G PN +T + VL+AC+H GLVEEG
Sbjct: 346 --EKETASWNALINAFAINGRAKEALGLFMEMNHKGFMPNEITMIGVLSACNHSGLVEEG 403
Query: 331 LNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGAC 390
+F K +EE + P I+HYGC++D+LGRAG L++AEK +P E +++ + L AC
Sbjct: 404 KRWF-KAMEEFGLTPKIEHYGCMVDLLGRAGCLQEAEKLMESMPYEANGIIL-SSFLFAC 461
Query: 391 SFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPG 450
+ +V ERV ++ ++ME G+Y+++ N+ A R+ +A+ ++ +M K G
Sbjct: 462 GYSKDVARAERVLKEAIKMEAWNDGNYIMLRNLYANEKRWKEADEVKGLMRRNGVKKEAG 521
Query: 451 CSLV 454
CS +
Sbjct: 522 CSAI 525
>gi|345505222|gb|AEN99835.1| chlororespiratory reduction 4, partial [Lepidium sativum]
Length = 597
Score = 253 bits (646), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 134/343 (39%), Positives = 209/343 (60%), Gaps = 6/343 (1%)
Query: 113 TALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVV 172
++++ YV G ++D+ LFD MP R+++TW MI G K G + A++LF+++P R+VV
Sbjct: 240 NSMIDGYVKHGRIEDAKDLFDVMPRRDVITWATMIDGYAKLGFIHQAKTLFDQIPHRDVV 299
Query: 173 SWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGY 232
++ ++ GY + EAL LF KM + P E T++ VL AI Q G + +H Y
Sbjct: 300 AYNSMMAGYVQNKYHMEALELFIKMEKESHLSPDETTLVIVLSAIAQLGRLSKAMDMHFY 359
Query: 233 GEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMG 292
K+ F ++ LID Y+KCG I A +F+ +E KN+ W +II G A+HG+G
Sbjct: 360 IVKKQFF-IGGKLGVALIDMYSKCGSIQHAMLVFK--GLENKNIDHWNAIIGGLAIHGLG 416
Query: 293 KEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGC 352
A + +++++ +KP+ +TF+ VLNACSH GLV+EGL F+ M + ++ P ++HYGC
Sbjct: 417 GPAFDMLLQIERLSIKPDDITFIGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGC 476
Query: 353 LIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERG 412
++D+L R+G +E A+ +P E D V+WRT L ACS H EMGE V + ++ ++ G
Sbjct: 477 MVDILSRSGSIELAKILIEKMPIEPND-VIWRTFLTACSHHKEFEMGELVAKHLI-LQAG 534
Query: 413 YG-GDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
Y YVL+ N+ A G + D R+R +M ER K+PGCS +
Sbjct: 535 YNPSSYVLLSNMYASCGMWKDVRRVRTMMKERKIQKIPGCSWI 577
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 105/389 (26%), Positives = 191/389 (49%), Gaps = 34/389 (8%)
Query: 39 HFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLF------------DSFTYSFLIRTCAT 86
H YSL + L+ + + ++H P LF D F+ S +++ C+
Sbjct: 58 HVYSLPYGETEDPFLWNAVIKSHSHGTDPRRSLFLFCLMLENGVSVDKFSLSLVLKACSR 117
Query: 87 LSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVM 146
L G +H + K G S +++ L+ +Y+ G L S ++FD MP+R+ V++N M
Sbjct: 118 LGFVKAGMXIHGFLRKTGLWSDLFLQNCLIGLYLKCGCLGYSRQVFDRMPQRDSVSYNSM 177
Query: 147 ITGLVKWGELEFARSLFEEMP--CRNVVSWTGIIDGYTRMNRS-NEALALFRKMVACEYT 203
I G VK G +E AR LF+ MP +N++SW +I GY + + N A LF +M
Sbjct: 178 IDGYVKCGLIESARELFDLMPKEMKNLISWNCLISGYAQTSDGVNIASKLFSEM-----P 232
Query: 204 EPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSAS 263
E I+ +++ ++G ++ + + +R D+ +ID YAK G I A
Sbjct: 233 EKDLISWNSMIDGYVKHGRIEDAKDLFDVMPRR-----DVITWATMIDGYAKLGFIHQAK 287
Query: 264 KLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVG-LKPNRVTFLSVLNACS 322
LF+ I +++V++ S+++G+ + EA+E F +M+K L P+ T + VL+A +
Sbjct: 288 TLFDQIP--HRDVVAYNSMMAGYVQNKYHMEALELFIKMEKESHLSPDETTLVIVLSAIA 345
Query: 323 HGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVV 382
G + + ++ +V++ + K LIDM + G ++ A G+ ++ D
Sbjct: 346 QLGRLSKAMDMHFYIVKK-QFFIGGKLGVALIDMYSKCGSIQHAMLVFKGLENKNID--H 402
Query: 383 WRTLLGACSFHGNVEMGERVTRKILEMER 411
W ++G + HG +G +L++ER
Sbjct: 403 WNAIIGGLAIHG---LGGPAFDMLLQIER 428
>gi|225444744|ref|XP_002278128.1| PREDICTED: pentatricopeptide repeat-containing protein At1g11290
[Vitis vinifera]
Length = 597
Score = 253 bits (646), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 166/492 (33%), Positives = 249/492 (50%), Gaps = 83/492 (16%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNL 92
L+NTL+ Y+ A ++A LY + H P D++T+ F++R+CA LS
Sbjct: 95 LWNTLIRGYADAGPCEEALALYSNM-----HGAGLFP---DNYTFPFVVRSCAVLSALRE 146
Query: 93 GTQLHAVISKVGFQSHVYVN-------------------------------TALVNMYVS 121
G ++H I K GF S V+V TA++ YV
Sbjct: 147 GKEVHCNIVKHGFDSDVFVQSSLVAMYSQSGETLGMELVFGEMVVRNIVSWTAVIAGYVQ 206
Query: 122 LGFLKDSSKLFDEM----PERNLVTW---------------------------------- 143
+ K+ +F EM + N VT
Sbjct: 207 NRYFKEGLGVFREMVGSGTQPNAVTLVSVLPACAGLEFLNLGKLIHGYGIKLGVDPDVSL 266
Query: 144 -NVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEY 202
N +I K G +E ARSLF+ M +N+VSW +I Y + N A+ LFR+M A E
Sbjct: 267 TNALIALYGKCGNVETARSLFDGMVVQNLVSWNAMIAAYEQNNAGANAVKLFRRMQA-EK 325
Query: 203 TEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSA 262
+ IT+++V+ A G + + + +H +++G ++ + N LID YAKCG I A
Sbjct: 326 VDFDYITMVSVISACASLGALNTGRWMHELVKRKGLE-INVSITNALIDMYAKCGNIDLA 384
Query: 263 SKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACS 322
++FE + +++VSWTS+I A HG G++A++ F RM+ G+KPN TF +V AC
Sbjct: 385 REVFERLPC--RSVVSWTSMIGACASHGHGEDALKLFSRMKDEGVKPNSFTFAAVFTACR 442
Query: 323 HGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVV 382
H GLVEEG F+ M+ + ++P ++H C++D+LGRAG L +A + +P E DV V
Sbjct: 443 HSGLVEEGRKHFESMMRDYSIMPGVEHCACMVDLLGRAGSLMEAYEFIDKMPVE-PDVSV 501
Query: 383 WRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDE 442
W LLG+C H N+E+ E V K+ ++ YVLM NI A GR+ DA RLR++M+E
Sbjct: 502 WGALLGSCRIHSNLELAELVAEKLFLLDPQTVTFYVLMSNIYAEAGRWEDAARLRKLMEE 561
Query: 443 RNAFKVPGCSLV 454
R K+PG SLV
Sbjct: 562 RELKKIPGHSLV 573
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 92/371 (24%), Positives = 172/371 (46%), Gaps = 64/371 (17%)
Query: 72 FDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKL 131
+ S ++++L+ C++L P+L +++HA++ G ++ ++T L+
Sbjct: 27 YHSRSFNYLLNCCSSL--PDL-SRIHALVVTNGCGQNLLLSTKLI--------------- 68
Query: 132 FDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEAL 191
IT +++AR +F++MP R+V W +I GY EAL
Sbjct: 69 ---------------ITACCLAPTMDYARKMFDQMPKRDVFLWNTLIRGYADAGPCEEAL 113
Query: 192 ALFRKMVAC-----EYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVL 246
AL+ M YT P + AVL A+ + +V C ++ K GF + D+ V
Sbjct: 114 ALYSNMHGAGLFPDNYTFPFVVRSCAVLSALREGKEVH-CNIV-----KHGFDS-DVFVQ 166
Query: 247 NCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVG 306
+ L+ Y++ G +F ++ V +N+VSWT++I+G+ + KE + F M G
Sbjct: 167 SSLVAMYSQSGETLGMELVFGEMVV--RNIVSWTAVIAGYVQNRYFKEGLGVFREMVGSG 224
Query: 307 LKPNRVTFLSVLNACSHGGLVEEGLNFFD--KMVE----ECEVLPDIKHYGCLIDMLGRA 360
+PN VT +SVL AC+ GL F + K++ + V PD+ LI + G+
Sbjct: 225 TQPNAVTLVSVLPACA-------GLEFLNLGKLIHGYGIKLGVDPDVSLTNALIALYGKC 277
Query: 361 GRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLM 420
G +E A G+ + ++V W ++ A + ++ R++ + + DY+ M
Sbjct: 278 GNVETARSLFDGMV--VQNLVSWNAMIAAYEQNNAGANAVKLFRRMQAEKVDF--DYITM 333
Query: 421 YNILAGVGRFG 431
++++ G
Sbjct: 334 VSVISACASLG 344
>gi|345505218|gb|AEN99833.1| chlororespiratory reduction 4 [Crucihimalaya wallichii]
Length = 617
Score = 253 bits (646), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 136/344 (39%), Positives = 210/344 (61%), Gaps = 8/344 (2%)
Query: 113 TALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVV 172
++++ YV G ++D+ LFD MP R++VTW+ MI G K G + A++LF++MP R+VV
Sbjct: 260 NSMIDGYVKHGRIEDAKYLFDVMPRRDVVTWSTMIDGYAKLGFVHQAKTLFDQMPHRDVV 319
Query: 173 SWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGY 232
S+ +I GY + + EAL +F M + P E T++ VL AI Q G + +H Y
Sbjct: 320 SYNSMIAGYVQNRYNMEALEIFSDMEKESHLSPDETTLVIVLSAIAQLGRLSKAMDMHLY 379
Query: 233 -GEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGM 291
EK+ F + V LID Y+KCG I A +F+ I E K++ W ++I G A+HG+
Sbjct: 380 IVEKQFFLGGKLGV--ALIDMYSKCGSIQHAMLVFKGI--ENKSIDHWNAMIGGLAIHGL 435
Query: 292 GKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYG 351
G+ A + ++++ +KP+ +TF+ +LNACSH GLV+EGL F+ M + ++ P ++HYG
Sbjct: 436 GESAFDMLLQIERRSIKPDDITFVGLLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYG 495
Query: 352 CLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMER 411
C++D+L R+G +E A+ +P E D V+WRT L AC+ H E GE V + ++ E
Sbjct: 496 CMVDILSRSGSIELAKNLIEEMPIEPND-VIWRTFLAACNHHKEFETGELVAKHLI-WEA 553
Query: 412 GYG-GDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
GY YVL+ N+ A G++ D R+R +M ER KVPGCS +
Sbjct: 554 GYNPSSYVLLSNLYASFGKWKDVRRIRTIMKERKIEKVPGCSWI 597
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 103/382 (26%), Positives = 196/382 (51%), Gaps = 28/382 (7%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNL 92
L+N ++ +S P++A LL+ + + D F+ S +++ C+ L
Sbjct: 92 LWNAVIKSHSHGTDPRRALLLFCLMLENGVS--------VDKFSLSLVLKACSRLGLVKE 143
Query: 93 GTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVK 152
G Q+H + K G S +++ L+ +Y+ G+L + ++FD MP+R+ V++N MI G VK
Sbjct: 144 GMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGWLGFARQIFDRMPQRDSVSYNSMIDGYVK 203
Query: 153 WGELEFARSLFEEMP--CRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITI 210
G E AR LF+ MP +N++SW +I GY ++++ + + K+ + E + I+
Sbjct: 204 CGSTESARELFDLMPEEMKNLISWNSMISGYA---QTSDGVDIASKLFS-EMPDKDLISW 259
Query: 211 LAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDIS 270
+++ ++G ++ + + +R D+ + +ID YAK G + A LF+ +
Sbjct: 260 NSMIDGYVKHGRIEDAKYLFDVMPRR-----DVVTWSTMIDGYAKLGFVHQAKTLFDQMP 314
Query: 271 VERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVG-LKPNRVTFLSVLNACSHGGLVEE 329
+++VS+ S+I+G+ + EA+E F M+K L P+ T + VL+A + G + +
Sbjct: 315 --HRDVVSYNSMIAGYVQNRYNMEALEIFSDMEKESHLSPDETTLVIVLSAIAQLGRLSK 372
Query: 330 GLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGA 389
++ +VE+ L K LIDM + G ++ A GI ++ D W ++G
Sbjct: 373 AMDMHLYIVEKQFFLGG-KLGVALIDMYSKCGSIQHAMLVFKGIENKSID--HWNAMIGG 429
Query: 390 CSFHGNVEMGERVTRKILEMER 411
+ HG +GE +L++ER
Sbjct: 430 LAIHG---LGESAFDMLLQIER 448
Score = 45.1 bits (105), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 48/256 (18%), Positives = 101/256 (39%), Gaps = 40/256 (15%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+N+++ Y +A ++ +++ S L P D T ++ A L +
Sbjct: 321 YNSMIAGYVQNRYNMEALEIFSDMEK-----ESHLSP--DETTLVIVLSAIAQLGRLSKA 373
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
+H I + F + AL++MY G ++ + +F + +++ WN MI GL
Sbjct: 374 MDMHLYIVEKQFFLGGKLGVALIDMYSKCGSIQHAMLVFKGIENKSIDHWNAMIGGLAIH 433
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
G E A + ++ R++ +P +IT + +
Sbjct: 434 GLGESAFDMLLQIERRSI--------------------------------KPDDITFVGL 461
Query: 214 LPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVER 273
L A +G VK L ++ ++ C++D ++ G I A L E++ +E
Sbjct: 462 LNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDILSRSGSIELAKNLIEEMPIEP 521
Query: 274 KNLVSWTSIISGFAMH 289
+++ W + ++ H
Sbjct: 522 NDVI-WRTFLAACNHH 536
>gi|297824945|ref|XP_002880355.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297326194|gb|EFH56614.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 599
Score = 253 bits (646), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 136/421 (32%), Positives = 232/421 (55%), Gaps = 12/421 (2%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+NT++ Y+ + +A +K+L++ F+ F+++ L+ C L
Sbjct: 147 WNTMVIGYAQDGNLHEALWFFKELRRSGIK--------FNEFSFAGLLTACVKSRQLQLN 198
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
Q H + GF S+V ++ ++++ Y G ++ + + FDEM +++ W +I+G K
Sbjct: 199 QQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWTTLISGYAKL 258
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
G++E A LF EMP +N VSWT +I GY R + AL LFRKM+A +P + T +
Sbjct: 259 GDMEAADKLFREMPEKNPVSWTALIAGYVRQGSGDLALDLFRKMIAMR-VKPEQFTFSSC 317
Query: 214 LPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVER 273
L A ++ + IHGY + I V + LID Y+K G + ++ ++F I ++
Sbjct: 318 LCASASIASLRHGKQIHGYMIRTNVRPNAI-VTSSLIDMYSKSGSLEASERVFR-ICYDK 375
Query: 274 KNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNF 333
++ V W ++IS A HG+G +A++ M K + PNR T + +LNACSH GLVEEG+ +
Sbjct: 376 QDCVLWNTMISALAQHGLGHKALQMLDDMIKFRVHPNRTTLVVILNACSHSGLVEEGVRW 435
Query: 334 FDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFH 393
F+ M + ++PD +HY CLID+LGRAG ++ +P E D +W +LG C H
Sbjct: 436 FESMTVQHGIVPDQEHYACLIDLLGRAGCFKELMSKIEEMPFE-PDKHIWNAILGVCRIH 494
Query: 394 GNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSL 453
GN E+G++ ++++++ Y+L+ +I A G++ E+LR +M +R K S
Sbjct: 495 GNEELGKKAAEELIKLDPESSAPYILLSSIYADHGKWELVEKLRGIMKKRRVNKEKAVSW 554
Query: 454 V 454
+
Sbjct: 555 I 555
Score = 151 bits (381), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 109/345 (31%), Positives = 170/345 (49%), Gaps = 34/345 (9%)
Query: 80 LIRTCATLSHPNLGTQLHAVISKVGFQS-HVYVNTALVNMYVSLGFLKDSSKLFDEMPER 138
L++ C G +H + GF+ + ++ L+ MY+ G D+ K+FD+M R
Sbjct: 52 LLQQCGDTKSLKQGKWIHRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLR 111
Query: 139 NLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRK-- 196
NL +WN M++G VK G L AR +F+ MP R+VVSW ++ GY + +EAL F++
Sbjct: 112 NLYSWNNMVSGFVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFFKELR 171
Query: 197 --------------MVACEYTEPSEITILA---VLPAIWQNGDVKSCQLIHGYGE----- 234
+ AC + ++ A VL A + + V SC +I Y +
Sbjct: 172 RSGIKFNEFSFAGLLTACVKSRQLQLNQQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQME 231
Query: 235 --KRGF---TAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMH 289
KR F T DI + LI YAK G + +A KLF ++ KN VSWT++I+G+
Sbjct: 232 SAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAADKLFREMP--EKNPVSWTALIAGYVRQ 289
Query: 290 GMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKH 349
G G A++ F +M + +KP + TF S L A + + G M+ V P+
Sbjct: 290 GSGDLALDLFRKMIAMRVKPEQFTFSSCLCASASIASLRHGKQIHGYMI-RTNVRPNAIV 348
Query: 350 YGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHG 394
LIDM ++G LE +E+ I + D V+W T++ A + HG
Sbjct: 349 TSSLIDMYSKSGSLEASERV-FRICYDKQDCVLWNTMISALAQHG 392
>gi|413924746|gb|AFW64678.1| hypothetical protein ZEAMMB73_926861 [Zea mays]
Length = 655
Score = 253 bits (645), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 140/419 (33%), Positives = 238/419 (56%), Gaps = 13/419 (3%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+ +L Y + ++A LL+ +++ +S + P D + ++ C + H +G
Sbjct: 219 WGVMLDSYCQTRNYKEALLLFAKMK------NSGVVP--DQLILATVLPACGHIRHLRIG 270
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
+H+ + ++++AL+++Y S ++ + KL++EMP ++LV+ M++G +
Sbjct: 271 KAIHSYMLVSDMIIGAHISSALISLYASCANMEMAEKLYNEMPRKDLVSSTAMVSGYARN 330
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
++E ARS+F+ MP ++VVSW+ +I GY N+ NEAL+LF M C EIT+L+V
Sbjct: 331 RKVEIARSIFDGMPEKDVVSWSAMISGYVDSNQPNEALSLFNGMQECG-IRSDEITMLSV 389
Query: 214 LPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVER 273
+ A G + + IH + + G + + N LID +AKCG I A +F ++ +
Sbjct: 390 ISACANLGSLDKAKWIHAFIKNSGLNKV-LHICNALIDMFAKCGGINLALNVFNEMPL-- 446
Query: 274 KNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNF 333
KN+++WTS+IS FAMHG GK ++ F +M+ G +PN VTFLS+L AC H GLV EG
Sbjct: 447 KNVITWTSMISAFAMHGDGKSSLRLFEQMKDEGAEPNEVTFLSLLYACCHAGLVHEGRLL 506
Query: 334 FDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFH 393
F MV++ + P +HYGC++D+LGRA +++A + E +V +W +LL AC H
Sbjct: 507 FSSMVQQYGIEPKHEHYGCMVDLLGRAKLMQEAVSLIESMHLE-PNVPIWGSLLAACWMH 565
Query: 394 GNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCS 452
G++++G +KIL+++ + G VL+ I +A+ +R VM K G S
Sbjct: 566 GDLKLGAFAAKKILQLDPNHDGASVLLLKIYMKSDNLNNAQEVRGVMKLHRVSKETGLS 624
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 76/328 (23%), Positives = 136/328 (41%), Gaps = 65/328 (19%)
Query: 97 HAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGEL 156
HA+ + G +V TAL Y + G ++D+ K+FD M
Sbjct: 173 HALAVRTGALDDGFVGTALAGAYAACGCVRDTRKVFDGMA-------------------- 212
Query: 157 EFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPA 216
R+VVSW ++D Y + EAL LF KM P ++ + VLPA
Sbjct: 213 -----------VRDVVSWGVMLDSYCQTRNYKEALLLFAKMKNSGVV-PDQLILATVLPA 260
Query: 217 IWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDI------- 269
++ + IH Y + + LI YA C + A KL+ ++
Sbjct: 261 CGHIRHLRIGKAIHSYMLVSDMI-IGAHISSALISLYASCANMEMAEKLYNEMPRKDLVS 319
Query: 270 ----------------------SVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGL 307
+ K++VSW+++ISG+ EA+ F MQ+ G+
Sbjct: 320 STAMVSGYARNRKVEIARSIFDGMPEKDVVSWSAMISGYVDSNQPNEALSLFNGMQECGI 379
Query: 308 KPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAE 367
+ + +T LSV++AC++ G +++ + ++ + + LIDM + G + A
Sbjct: 380 RSDEITMLSVISACANLGSLDKA-KWIHAFIKNSGLNKVLHICNALIDMFAKCGGINLAL 438
Query: 368 KTALGIPSEITDVVVWRTLLGACSFHGN 395
+P + +V+ W +++ A + HG+
Sbjct: 439 NVFNEMP--LKNVITWTSMISAFAMHGD 464
>gi|297741541|emb|CBI32673.3| unnamed protein product [Vitis vinifera]
Length = 819
Score = 253 bits (645), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 137/382 (35%), Positives = 220/382 (57%), Gaps = 5/382 (1%)
Query: 73 DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLF 132
+ F++ +I + L N G QLHA K+G +S+V+V +A+V+ Y L + ++ K F
Sbjct: 391 NQFSFGTVIPSSTALQDLNSGRQLHACAIKMGLESNVFVGSAVVDFYAKLTSINEAQKAF 450
Query: 133 DEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALA 192
++ E N+V++ +I G +K + A +LF +MP RNVVSW +I GY++M + EA+
Sbjct: 451 EDTHEPNVVSYTTLIRGYLKKERFDDALALFRKMPERNVVSWNAMISGYSQMGYNEEAVN 510
Query: 193 LFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDT 252
LF M+ E T P+E T + A+ + + HG K FD+ + N L+
Sbjct: 511 LFVVMLR-EGTLPNERTFPCAISAVANIAALGMGRSFHGSAVKF-LGKFDVFIGNSLVSF 568
Query: 253 YAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRV 312
YAKCG + + +F ++ +KN+VSW ++I G+A HG G EA+ F +MQ GL+PN V
Sbjct: 569 YAKCGSMEESLLVFN--TLPKKNIVSWNALICGYANHGRGMEAIYFFEKMQDTGLRPNSV 626
Query: 313 TFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALG 372
T L +L AC+H GLV++G ++F+K E L +H+ C++D+L R+GR ++AEK
Sbjct: 627 TLLGLLLACNHSGLVDKGYSYFNKARVEEPGLLTPEHHACMVDLLSRSGRFKEAEKFLHE 686
Query: 373 IPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGD 432
+P + + W+ LLG C H N+E+GE RKIL ++ YV++ N + GR+
Sbjct: 687 LPF-VPGIGFWKALLGGCRIHSNMELGELAARKILALDPEDVSSYVMLSNAHSAAGRWQS 745
Query: 433 AERLRRVMDERNAFKVPGCSLV 454
+R+ M E+ VPG S +
Sbjct: 746 VSMIRKEMREKRMKGVPGSSWI 767
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 120/265 (45%), Gaps = 34/265 (12%)
Query: 159 ARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIW 218
A LF+E+P +VVS T I + R + EA+ F +M+A +P++ + V+P+
Sbjct: 345 ACKLFDEVPNWDVVSATATIGCFARYHHHEEAIYFFSRMLALN-IKPNQFSFGTVIPSST 403
Query: 219 QNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFED---------- 268
D+ S + +H K G + ++ V + ++D YAK I A K FED
Sbjct: 404 ALQDLNSGRQLHACAIKMGLES-NVFVGSAVVDFYAKLTSINEAQKAFEDTHEPNVVSYT 462
Query: 269 ------ISVER-------------KNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKP 309
+ ER +N+VSW ++ISG++ G +EAV F M + G P
Sbjct: 463 TLIRGYLKKERFDDALALFRKMPERNVVSWNAMISGYSQMGYNEEAVNLFVVMLREGTLP 522
Query: 310 NRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKT 369
N TF ++A ++ + G +F V+ D+ L+ + G +E++
Sbjct: 523 NERTFPCAISAVANIAALGMGRSFHGSAVKFLGKF-DVFIGNSLVSFYAKCGSMEESLLV 581
Query: 370 ALGIPSEITDVVVWRTLLGACSFHG 394
+P + ++V W L+ + HG
Sbjct: 582 FNTLPKK--NIVSWNALICGYANHG 604
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 52/96 (54%), Gaps = 6/96 (6%)
Query: 223 VKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSI 282
+K Q IHG K G T + + + +Y+ ++ A KLF++ V ++VS T+
Sbjct: 310 LKESQRIHGRAIKLGTTILEPDI----VCSYSASKALWDACKLFDE--VPNWDVVSATAT 363
Query: 283 ISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVL 318
I FA + +EA+ F RM + +KPN+ +F +V+
Sbjct: 364 IGCFARYHHHEEAIYFFSRMLALNIKPNQFSFGTVI 399
>gi|79456853|ref|NP_191848.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75116883|sp|Q683I9.1|PP295_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g62890
gi|51968398|dbj|BAD42891.1| putative protein [Arabidopsis thaliana]
gi|332646886|gb|AEE80407.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 573
Score = 253 bits (645), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 142/414 (34%), Positives = 234/414 (56%), Gaps = 14/414 (3%)
Query: 46 SPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGF 105
SPQ+ + L+ + H SP D T+ FL+ + H LG + HA I G
Sbjct: 40 SPQRHSPISVYLR-MRNHRVSP-----DFHTFPFLLPSFHNPLHLPLGQRTHAQILLFGL 93
Query: 106 QSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEE 165
+V T+L+NMY S G L+ + ++FD+ ++L WN ++ K G ++ AR LF+E
Sbjct: 94 DKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLIDDARKLFDE 153
Query: 166 MPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACE----YTEPSEITILAVLPAIWQNG 221
MP RNV+SW+ +I+GY + EAL LFR+M + + P+E T+ VL A + G
Sbjct: 154 MPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLG 213
Query: 222 DVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTS 281
++ + +H Y +K DI + LID YAKCG + A ++F + +K++ ++++
Sbjct: 214 ALEQGKWVHAYIDKY-HVEIDIVLGTALIDMYAKCGSLERAKRVFNALG-SKKDVKAYSA 271
Query: 282 IISGFAMHGMGKEAVENFGRMQKV-GLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEE 340
+I AM+G+ E + F M + PN VTF+ +L AC H GL+ EG ++F M+EE
Sbjct: 272 MICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYFKMMIEE 331
Query: 341 CEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGE 400
+ P I+HYGC++D+ GR+G +++AE +P E DV++W +LL G+++ E
Sbjct: 332 FGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPME-PDVLIWGSLLSGSRMLGDIKTCE 390
Query: 401 RVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
++++E++ G YVL+ N+ A GR+ + + +R M+ + KVPGCS V
Sbjct: 391 GALKRLIELDPMNSGAYVLLSNVYAKTGRWMEVKCIRHEMEVKGINKVPGCSYV 444
>gi|224120036|ref|XP_002318226.1| predicted protein [Populus trichocarpa]
gi|222858899|gb|EEE96446.1| predicted protein [Populus trichocarpa]
Length = 501
Score = 253 bits (645), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 163/495 (32%), Positives = 241/495 (48%), Gaps = 87/495 (17%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNL 92
++N ++ Y+ Q+ ++ ++ Q H+ FTY ++I +C L
Sbjct: 21 IWNAMIRGYAFNGPFQECIRMFDEMPQRGLKPHN--------FTYPYVINSCCELEWYGR 72
Query: 93 GTQLHAVISKVGFQSHVYVNTALVNMY--------------------------------- 119
G ++H I K GF+S V +L NMY
Sbjct: 73 GKRVHCEIVKSGFESSYAVANSLFNMYLKMPASFDVGLASNCKLDYARKIFDDMCVRPVE 132
Query: 120 ---------VSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWG---------------- 154
V++G +K + +LFD MPER++V+WN MI G K G
Sbjct: 133 LWNQMIGKYVNIGDVKSARELFDIMPERDIVSWNSMILGYAKGGKVANARGLFEKMPEKN 192
Query: 155 ---------------ELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVA 199
+LE ARS FE MP RNVVSW +I Y + + E+L LF +M +
Sbjct: 193 VISWTSMIGAYADTDDLETARSFFETMPQRNVVSWNSMISSYAKHGKFVESLNLFVQMQS 252
Query: 200 CEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCI 259
E P T ++VL A GD++ + IH + ++ V L + YA+CG +
Sbjct: 253 -EGVTPDGYTFVSVLSACSNLGDLEFGKYIHYLSGD--LSQSEVMVGTALTEMYAQCGDV 309
Query: 260 FSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLN 319
A +F I + ++++ W II A+HG +EA++ F M+K GLKPN TF S L
Sbjct: 310 DKAFAVF--IKIGKRDVFCWNVIIKALALHGRSEEAIKIFLLMRKTGLKPNDFTFTSALF 367
Query: 320 ACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITD 379
ACSHGGLVEEG F+ M ++ +++P I HYGCLIDML R G+LE+A +P + D
Sbjct: 368 ACSHGGLVEEGHIIFNSMEKDYKIIPKITHYGCLIDMLCRNGQLEEAMLLVEDMPFQ-PD 426
Query: 380 VVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRV 439
V +W LLG C G++++ E+V K EME G YVL+ NI A G++ +A R+
Sbjct: 427 VAIWGALLGGCRVTGDLKLAEKVVEKATEMETNESGVYVLLSNIHASAGQWIEAADARKK 486
Query: 440 MDERNAFKVPGCSLV 454
MDE+ K G S+V
Sbjct: 487 MDEKKISKKTGSSVV 501
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 84/334 (25%), Positives = 137/334 (41%), Gaps = 87/334 (26%)
Query: 140 LVTWNVMITGLVKWGELEFARSLFEEMPCRN----------VVSWTGIIDGYTRMNR--- 186
+V WN MI G G + +F+EMP R V++ ++ Y R R
Sbjct: 19 IVIWNAMIRGYAFNGPFQECIRMFDEMPQRGLKPHNFTYPYVINSCCELEWYGRGKRVHC 78
Query: 187 -------------SNEALALFRKMVA---------CEYTEPSEI-TILAVLPA-IWQN-- 220
+N ++ KM A C+ +I + V P +W
Sbjct: 79 EIVKSGFESSYAVANSLFNMYLKMPASFDVGLASNCKLDYARKIFDDMCVRPVELWNQMI 138
Query: 221 ------GDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDI----- 269
GDVKS + + +R DI N +I YAK G + +A LFE +
Sbjct: 139 GKYVNIGDVKSARELFDIMPER-----DIVSWNSMILGYAKGGKVANARGLFEKMPEKNV 193
Query: 270 ------------------------SVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKV 305
++ ++N+VSW S+IS +A HG E++ F +MQ
Sbjct: 194 ISWTSMIGAYADTDDLETARSFFETMPQRNVVSWNSMISSYAKHGKFVESLNLFVQMQSE 253
Query: 306 GLKPNRVTFLSVLNACSHGGLVEEG--LNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRL 363
G+ P+ TF+SVL+ACS+ G +E G +++ + + EV+ L +M + G +
Sbjct: 254 GVTPDGYTFVSVLSACSNLGDLEFGKYIHYLSGDLSQSEVMVGT----ALTEMYAQCGDV 309
Query: 364 EQAEKTALGIPSEITDVVVWRTLLGACSFHGNVE 397
++A + I DV W ++ A + HG E
Sbjct: 310 DKAFAVFIKIGKR--DVFCWNVIIKALALHGRSE 341
Score = 42.4 bits (98), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Query: 263 SKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNAC 321
S++ D S E +V W ++I G+A +G +E + F M + GLKP+ T+ V+N+C
Sbjct: 9 SQMGHDSSAE---IVIWNAMIRGYAFNGPFQECIRMFDEMPQRGLKPHNFTYPYVINSC 64
>gi|334187520|ref|NP_001190262.1| pentatricopeptide repeat (PPR) family protein [Arabidopsis
thaliana]
gi|223635618|sp|P0C8Q7.1|PP369_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g08305
gi|332003897|gb|AED91280.1| pentatricopeptide repeat (PPR) family protein [Arabidopsis
thaliana]
Length = 534
Score = 253 bits (645), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 141/421 (33%), Positives = 241/421 (57%), Gaps = 11/421 (2%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+N ++ +S + +P+K+ +Y Q+ + LP D TY FL+++ + LS+ LG
Sbjct: 76 WNFVIRGFSNSRNPEKSISVYIQMLRF-----GLLP---DHMTYPFLMKSSSRLSNRKLG 127
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
LH + K G + +++ L++MY S + KLFDEMP +NLVTWN ++ K
Sbjct: 128 GSLHCSVVKSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKS 187
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
G++ AR +F+EM R+VV+W+ +IDGY + N+AL +F +M+ ++ +E+T+++V
Sbjct: 188 GDVVSARLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSV 247
Query: 214 LPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVER 273
+ A G + + +H Y + + LID YAKCG I A +F SV+
Sbjct: 248 ICACAHLGALNRGKTVHRYILDVHL-PLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKE 306
Query: 274 KNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNF 333
+ + W +II G A HG +E+++ F +M++ + P+ +TFL +L ACSHGGLV+E +F
Sbjct: 307 TDALMWNAIIGGLASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACSHGGLVKEAWHF 366
Query: 334 FDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFH 393
F K ++E P +HY C++D+L RAG ++ A +P + T ++ LL C H
Sbjct: 367 F-KSLKESGAEPKSEHYACMVDVLSRAGLVKDAHDFISEMPIKPTGSML-GALLNGCINH 424
Query: 394 GNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSL 453
GN+E+ E V +K++E++ G YV + N+ A +F A +R M+++ K+ G S+
Sbjct: 425 GNLELAETVGKKLIELQPHNDGRYVGLANVYAINKQFRAARSMREAMEKKGVKKIAGHSI 484
Query: 454 V 454
+
Sbjct: 485 L 485
>gi|449434296|ref|XP_004134932.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
gi|449479547|ref|XP_004155632.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 638
Score = 253 bits (645), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 142/453 (31%), Positives = 250/453 (55%), Gaps = 20/453 (4%)
Query: 4 LQNSQTPNNITTQIHSHLLTTNSLLHHSQLF-NTLLHFYSLAESPQKAFLLYKQLQQIYT 62
+ +S P++ I+ NS+ H + N ++ + + P+ + LY + + +
Sbjct: 75 ISSSSLPSDYALSIY------NSISHPTVFATNNMIRCFVKGDLPRHSISLYSHMCRSFV 128
Query: 63 HSHSPLPPLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSL 122
+ + T +F+++ C+ G Q+ + K+GF V+V AL+++Y +
Sbjct: 129 AAP-------NKHTLTFVLQACSNAFAIREGAQVQTHVIKLGFVKDVFVRNALIHLYCTC 181
Query: 123 GFLKDSSKLFDEMPE-RNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGY 181
++ + ++FDE+P R++V+WN MI G V+ G++ A+ LF EMP ++V+SW II G
Sbjct: 182 CRVESAKQVFDEVPSSRDVVSWNSMIVGFVRLGQISVAQKLFVEMPEKDVISWGTIISGC 241
Query: 182 TRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAF 241
+ +AL F+++ + P+E ++++L A Q G ++ + IH F
Sbjct: 242 VQNGELEKALDYFKEL-GEQKLRPNEAILVSLLAAAAQLGTLEYGKRIHSIANSLRF-PM 299
Query: 242 DIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGR 301
+ L+D YAKCGCI + LF+ + K+ SW +I G A HG+G+EA+ F +
Sbjct: 300 TASLGTALVDMYAKCGCIDESRFLFDRMP--EKDKWSWNVMICGLATHGLGQEALALFEK 357
Query: 302 MQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAG 361
G P VTF+ VL ACS GLV EG +FF M + + P+++HYGC++D+L RAG
Sbjct: 358 FLTQGFHPVNVTFIGVLTACSRAGLVSEGKHFFKLMTDTYGIEPEMEHYGCMVDLLSRAG 417
Query: 362 RLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMY 421
+ A + +P+ D V+W ++LG+C HG +E+GE + K+++M+ + G YV +
Sbjct: 418 FVYDAVEMINRMPAP-PDPVLWASVLGSCQVHGFIELGEEIGNKLIQMDPTHNGHYVQLA 476
Query: 422 NILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
I A + ++ D ++RR+M ERN+ K+ G SL+
Sbjct: 477 RIFARLRKWEDVSKVRRLMAERNSNKIAGWSLI 509
>gi|326504712|dbj|BAK06647.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 658
Score = 253 bits (645), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 128/365 (35%), Positives = 208/365 (56%), Gaps = 3/365 (0%)
Query: 80 LIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERN 139
LI+ CA + G QLH VI K GF +H +V L++ Y S L + F + +
Sbjct: 283 LIKVCARHAAVLEGQQLHTVILKDGFDAHPFVQATLIHFYGSCDLLDIARMQFKLSDKSH 342
Query: 140 LVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVA 199
+ +WN +++GL+ + AR LF++MP R+ +SW+ ++ GY + SN+AL LF M+
Sbjct: 343 IASWNALMSGLLHRNLMHEARQLFDDMPERDTISWSTLLSGYVQSGHSNKALQLFYLMLG 402
Query: 200 CEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCI 259
EP+++T+ + L A+ +G ++ + IH Y D + LID YAKCG +
Sbjct: 403 AG-VEPNDVTLASTLSAVADSGMLEQGRFIHDYIISNSIQLTD-NLSAGLIDMYAKCGSV 460
Query: 260 FSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLN 319
A +LF + + ++ W +II A+HG ++E F +Q+ +KPN VT++ VLN
Sbjct: 461 ADAIQLFSHVKHKLSSVSPWNAIICSLAIHGHAHTSLELFLELQRTNIKPNSVTYIGVLN 520
Query: 320 ACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITD 379
AC H GLV EG + F+ M E + P IKHYGC++D+LGRAG LE+AE +P +D
Sbjct: 521 ACCHAGLVTEGRHHFESMSREYGIQPTIKHYGCMVDLLGRAGHLEEAENLIQMMPMR-SD 579
Query: 380 VVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRV 439
VV+W ++L A HGNV +GE+ ++ +++ +G V + NI A R+ + +R+
Sbjct: 580 VVIWGSILAAARTHGNVALGEKAAEELAKIDPNHGASKVALSNIFAEAARWNNVSLVRKE 639
Query: 440 MDERN 444
+ + +
Sbjct: 640 LQDED 644
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 92/346 (26%), Positives = 161/346 (46%), Gaps = 38/346 (10%)
Query: 97 HAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGEL 156
H V + G + V T LV+ Y + + + ++F++MP++N VTWN M+ G +K G L
Sbjct: 167 HGVTVRRGLNGFLIVATNLVHAYAAASQVCFAREIFEQMPDKNTVTWNAMLNGYLKAGML 226
Query: 157 EFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPA 216
A +F +P R+ VSW IIDGY R + ++EAL + M+A T + ++ ++
Sbjct: 227 PMAAEVFGRIPERDAVSWLTIIDGYIRADCTSEALRAYVAMMAEVDTRGNAALLVDLIKV 286
Query: 217 IWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCI----------------- 259
++ V Q +H K GF A V LI Y C +
Sbjct: 287 CARHAAVLEGQQLHTVILKDGFDAHPF-VQATLIHFYGSCDLLDIARMQFKLSDKSHIAS 345
Query: 260 --------------FSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKV 305
A +LF+D+ ++ +SW++++SG+ G +A++ F M
Sbjct: 346 WNALMSGLLHRNLMHEARQLFDDM--PERDTISWSTLLSGYVQSGHSNKALQLFYLMLGA 403
Query: 306 GLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQ 365
G++PN VT S L+A + G++E+G D ++ L D G LIDM + G +
Sbjct: 404 GVEPNDVTLASTLSAVADSGMLEQGRFIHDYIISNSIQLTDNLSAG-LIDMYAKCGSVAD 462
Query: 366 AEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMER 411
A + + +++ V W ++ + + HG+ + LE++R
Sbjct: 463 AIQLFSHVKHKLSSVSPWNAIICSLAIHGHAHTSLEL---FLELQR 505
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 135/272 (49%), Gaps = 18/272 (6%)
Query: 79 FLIRTCATLSHPNLGTQLHAVISKVGF-QSHVYVNTALVNMYVSLGFLKDSS---KLFDE 134
FL+ + + + G QLHA+ +K G S+ +V +L+ Y L + + LFDE
Sbjct: 11 FLVSSLKSGARLRHGEQLHALAAKSGLLASNTFVRNSLLAFYARLPSPQAPALARHLFDE 70
Query: 135 MPE--RNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALA 192
+P R+ N ++ L + G L+ A+ + EMP R+ VS+T ++ R + +A+A
Sbjct: 71 IPLALRDPAAHNTLLASLARAGRLDLAQGMLAEMPQRDTVSYTTVLTALARAGHAEDAVA 130
Query: 193 LFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDT 252
+FR M+A + P+E+T+ VL A+ + HG +RG F I N L+
Sbjct: 131 VFRGMLAQD-VPPNEVTLAGVLTALALERPPVPVGVAHGVTVRRGLNGFLIVATN-LVHA 188
Query: 253 YAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNR- 311
YA + A ++FE + KN V+W ++++G+ GM A E FGR+ P R
Sbjct: 189 YAAASQVCFAREIFEQM--PDKNTVTWNAMLNGYLKAGMLPMAAEVFGRI------PERD 240
Query: 312 -VTFLSVLNACSHGGLVEEGLNFFDKMVEECE 342
V++L++++ E L + M+ E +
Sbjct: 241 AVSWLTIIDGYIRADCTSEALRAYVAMMAEVD 272
>gi|225465641|ref|XP_002270476.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08305-like [Vitis vinifera]
Length = 539
Score = 253 bits (645), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 137/382 (35%), Positives = 219/382 (57%), Gaps = 4/382 (1%)
Query: 73 DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLF 132
D TY F+ + A LS L +H I+K G ++ +L++MY S G + + K+F
Sbjct: 111 DHLTYPFIAKAVARLSELRLALAVHCRIAKEGLWFDRFIANSLIHMYGSCGDIGSARKVF 170
Query: 133 DEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALA 192
DEM RN V+WN M+ G K G+L+ AR +FE MP R+VVSW+ +IDG + ALA
Sbjct: 171 DEMLIRNSVSWNAMLDGYAKCGDLDSARQVFESMPDRDVVSWSSMIDGCVKGGEYGVALA 230
Query: 193 LFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDT 252
+F +M + +E+T+++VL A G ++ + +H Y F + + L+D
Sbjct: 231 IFERMRVVG-PKANEVTMVSVLCACAHLGALEQGRTMHQYMVDNTMR-FTLVLRTSLMDM 288
Query: 253 YAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRV 312
YAKCG I A +F + +++ +++ W +II G A HG+ E++E F MQ +G+ P+ +
Sbjct: 289 YAKCGAIEEAIAVFRGVPMDQTDVLMWNTIIGGLATHGLVHESLELFKEMQVLGIVPDEI 348
Query: 313 TFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALG 372
T+L + +AC+HGGLV E +FF + ++ V P +HY C++D+L RAG+L +A
Sbjct: 349 TYLCLFSACAHGGLVHEAWHFFKSLGKQGMV-PKSEHYACMVDVLSRAGQLAEAYDFIAQ 407
Query: 373 IPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGD 432
+P E T ++ LL C H ++ ERV RK++E+E + G Y+ + N+ AGV + +
Sbjct: 408 MPMEPTASML-GALLNGCMNHRRFDLAERVGRKLIELEPDHDGRYIGLSNVYAGVKLWDN 466
Query: 433 AERLRRVMDERNAFKVPGCSLV 454
A +R M+ R K PG S V
Sbjct: 467 ARMMREAMERRGVKKSPGFSFV 488
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 95/333 (28%), Positives = 155/333 (46%), Gaps = 38/333 (11%)
Query: 80 LIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYV--SLGFLKDSSKLFDEMPE 137
L+ C ++S Q+ A G H + L++ S G + S ++F ++P
Sbjct: 18 LLENCRSMSEFK---QIQAFFITSGLSQHHPFASRLLSFSAISSWGDIDHSYRIFLQIPS 74
Query: 138 RNLVTWNVMITGLVKWGELEFARSLFEEM----PCRNVVSWTGIIDGYTRMNRSNEALAL 193
+ WN +I G K + S+F +M C + +++ I R++ ALA
Sbjct: 75 PTISNWNSIIRGFSKGKNPNPSVSVFVKMLRFGVCPDHLTYPFIAKAVARLSELRLALA- 133
Query: 194 FRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGE-------KRGFTAFDIR-- 244
V C + +W + + + LIH YG ++ F IR
Sbjct: 134 ----VHCRIAK----------EGLWFDRFIAN-SLIHMYGSCGDIGSARKVFDEMLIRNS 178
Query: 245 -VLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQ 303
N ++D YAKCG + SA ++FE S+ +++VSW+S+I G G A+ F RM+
Sbjct: 179 VSWNAMLDGYAKCGDLDSARQVFE--SMPDRDVVSWSSMIDGCVKGGEYGVALAIFERMR 236
Query: 304 KVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRL 363
VG K N VT +SVL AC+H G +E+G MV+ + L+DM + G +
Sbjct: 237 VVGPKANEVTMVSVLCACAHLGALEQGRTMHQYMVDNTMRFTLVLRTS-LMDMYAKCGAI 295
Query: 364 EQAEKTALGIPSEITDVVVWRTLLGACSFHGNV 396
E+A G+P + TDV++W T++G + HG V
Sbjct: 296 EEAIAVFRGVPMDQTDVLMWNTIIGGLATHGLV 328
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/105 (23%), Positives = 51/105 (48%), Gaps = 2/105 (1%)
Query: 70 PLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSS 129
P + T ++ CA L G +H + + + + T+L++MY G ++++
Sbjct: 240 PKANEVTMVSVLCACAHLGALEQGRTMHQYMVDNTMRFTLVLRTSLMDMYAKCGAIEEAI 299
Query: 130 KLFDEMP--ERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVV 172
+F +P + +++ WN +I GL G + + LF+EM +V
Sbjct: 300 AVFRGVPMDQTDVLMWNTIIGGLATHGLVHESLELFKEMQVLGIV 344
>gi|147834049|emb|CAN70994.1| hypothetical protein VITISV_038698 [Vitis vinifera]
Length = 751
Score = 253 bits (645), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 159/484 (32%), Positives = 246/484 (50%), Gaps = 74/484 (15%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNL 92
L N+++ Y ++F LY+ L++ S +P DSFT+S L ++CA
Sbjct: 228 LCNSMIKAYVGMRQYSESFALYRDLRR--NTSFTP-----DSFTFSVLAKSCALNMAIWE 280
Query: 93 GTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTW--------- 143
G ++H+ + VGF +Y TALV+MY G + + KLFDEM +R+ V+W
Sbjct: 281 GQEIHSHVVAVGFCLDLYAATALVDMYAKFGKMDCARKLFDEMIDRSQVSWTALIGGYVR 340
Query: 144 ----------------------NVMITGLVKWGELEFARSLFEEMPCRNVVSWT------ 175
N MI VK G++ AR LF+EMP R+VVSWT
Sbjct: 341 SGDMDNAGKLFDQMIEKDSAAFNTMIDAYVKLGDMCSARKLFDEMPERSVVSWTIMIYGY 400
Query: 176 -------------------------GIIDGYTRMNRSNEALALFRKMVACEYTEPSEITI 210
+I GY + + EAL LF +M + EP E+TI
Sbjct: 401 SSNGNLDSARSLFDAMPEKNLFSWNAMISGYXQNKQPYEALKLFHEMQSTTSLEPDEVTI 460
Query: 211 LAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDIS 270
++VLPAI G + +H + ++ V LID YAKCG I + +F+++
Sbjct: 461 VSVLPAIADLGALDLGGWVHRFVRRKKLDRA-TNVGTALIDMYAKCGEIVKSRGVFDNMP 519
Query: 271 VERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEG 330
K SW ++I+ FA++G KEA+ F M G PN +T + VL+AC+H GLVEEG
Sbjct: 520 --EKETASWNALINAFAINGRAKEALGLFMEMNHKGFMPNEITMIGVLSACNHSGLVEEG 577
Query: 331 LNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGAC 390
+F K +EE + P I+HYGC++D+LGRAG L++AEK +P E +++ + L AC
Sbjct: 578 KRWF-KAMEEFGLTPKIEHYGCMVDLLGRAGCLQEAEKLMESMPYEANGIIL-SSFLFAC 635
Query: 391 SFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPG 450
+ +V ERV ++ ++ME G+Y+++ N+ A R+ +A+ ++ +M K G
Sbjct: 636 GYSKDVARAERVLKEAIKMEAWNDGNYIMLRNLYANEKRWKEADEVKGLMRRNGVKKEAG 695
Query: 451 CSLV 454
CS +
Sbjct: 696 CSAI 699
>gi|359488035|ref|XP_003633690.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14820-like [Vitis vinifera]
Length = 731
Score = 253 bits (645), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 134/372 (36%), Positives = 217/372 (58%), Gaps = 7/372 (1%)
Query: 85 ATLSHPNLGTQLHAVISKVGFQSHVYV--NTALVNMYVSLGFLKDSSKLFDEMPERNLVT 142
A ++ +G +HA + + H+ V TAL++MY G L + +LF+ + ++ +V+
Sbjct: 236 ADTANMRMGKAMHAYVIRNSNNEHMGVPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVS 295
Query: 143 WNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEY 202
W MI G ++ LE AR+LF+ R+V+ WT ++ Y + N ++A LF +M
Sbjct: 296 WTAMIAGCIRSNRLEEARALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLFDQM-RTSG 354
Query: 203 TEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSA 262
P+++TI+++L G + + +H Y +K D + L+D YAKCG I +A
Sbjct: 355 VRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKER-VEVDCILNTALVDMYAKCGDINAA 413
Query: 263 SKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACS 322
+LF I +++ W +II+GFAMHG G+EA++ F M++ G+KPN +TF+ +L+ACS
Sbjct: 414 GRLF--IEAISRDICMWNAIITGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLHACS 471
Query: 323 HGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVV 382
H GLV EG F+KMV ++P I+HYGC++D+LGRAG L++A + +P + + +V
Sbjct: 472 HAGLVTEGKKLFEKMVHTFGLVPQIEHYGCMVDLLGRAGLLDEAHEMIKSMPIK-PNTIV 530
Query: 383 WRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDE 442
W L+ AC H N ++GE ++LE+E G VLM NI A R+ DA +R+ M
Sbjct: 531 WGALVAACRLHKNPQLGELAATQLLEIEPENCGYNVLMSNIYAAANRWSDAAGVRKTMKT 590
Query: 443 RNAFKVPGCSLV 454
K PG S++
Sbjct: 591 VGMKKEPGHSVI 602
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 102/444 (22%), Positives = 186/444 (41%), Gaps = 95/444 (21%)
Query: 14 TTQIHSHLLTTN-------------SLLHHSQLFNTLLHFYSLAESPQKAFLLYKQLQQI 60
T QIH+H++ T+ S L S +N ++ Y+ P+ A +Y QL+++
Sbjct: 59 TKQIHAHIIKTHFHHALQIPLNDFPSGLSPSAQWNFVITSYTKRNQPRNALNVYAQLRKM 118
Query: 61 YTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYV 120
D+F +++ C +S LG ++H + K G V+V AL+ MY
Sbjct: 119 DFE--------VDNFMAPSVLKACGQVSWTQLGKEIHGFVLKKGLDRDVFVGNALMLMYG 170
Query: 121 SLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDG 180
++ + +FD+M ER++V+W+ MI L + E + A L EM V
Sbjct: 171 ECACVEYARLVFDKMMERDVVSWSTMIRSLSRNKEFDMALELIREMNFMQV--------- 221
Query: 181 YTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTA 240
PSE+ +++++ +++ + +H Y +
Sbjct: 222 -----------------------RPSEVAMVSMVNLFADTANMRMGKAMHAYVIRNSNNE 258
Query: 241 -FDIRVLNCLIDTYAKCGCIFSASKLFEDI-----------------------------S 270
+ L+D YAKCG + A +LF + S
Sbjct: 259 HMGVPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEARALFDS 318
Query: 271 VERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEG 330
+ ++++ WT+++S +A +A F +M+ G++P +VT +S+L+ C+ G ++ G
Sbjct: 319 TQNRDVMIWTAMLSAYAQANCIDQAFNLFDQMRTSGVRPTKVTIVSLLSLCAVAGALDLG 378
Query: 331 L---NFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLL 387
++ DK E EV D L+DM + G + A + L I + D+ +W ++
Sbjct: 379 KWVHSYIDK--ERVEV--DCILNTALVDMYAKCGDINAAGR--LFIEAISRDICMWNAII 432
Query: 388 GACSFHGNVEMGERVTRKILEMER 411
+ HG GE EMER
Sbjct: 433 TGFAMHG---YGEEALDIFAEMER 453
>gi|225435933|ref|XP_002267829.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14170-like [Vitis vinifera]
Length = 455
Score = 253 bits (645), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 148/419 (35%), Positives = 232/419 (55%), Gaps = 45/419 (10%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+N ++ +S + P K+ L+ Q++ H PP D FT ++R CA LG
Sbjct: 78 WNIIIGEFSRSHLPHKSIDLFLQMR------HFNQPP--DVFTLPLVLRACAASGSVKLG 129
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
+H + ++G + ++V +ALV MYV+ G K+ D
Sbjct: 130 VSVHGLCVEMGMEKSLFVASALVFMYVTFG------KVLD-------------------- 163
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
AR LF+EMP R+ V WT ++ GY + AL++FR+MV+ + ++++
Sbjct: 164 -----ARVLFDEMPERDAVLWTAMLAGYAQHEEPMLALSVFRQMVSAGVALDG-VVMISL 217
Query: 214 LPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVER 273
L A Q G +K + +HG+ +R A + + N L+ Y KC + + LF+ +
Sbjct: 218 LLACGQLGWLKHGKSVHGWITRRCL-ALGLNLGNALVYFYVKCAALGYSYNLFDKMP--E 274
Query: 274 KNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNF 333
++++SW+SII G+ + G A++ F RM+ G+KPN VTFL L+AC+H G+VE +
Sbjct: 275 RDVISWSSIILGYGLSGNVDIALDLFDRMRVAGVKPNDVTFLGALSACTHTGMVERAHTY 334
Query: 334 FDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFH 393
F+ M++E V P++KHY C++D LGRAG LE AE+ +P E D V LLG C H
Sbjct: 335 FE-MMKEYGVAPELKHYACMVDCLGRAGMLEDAERFIEEMPVE-ADGAVLGALLGGCRVH 392
Query: 394 GNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCS 452
GN E+GERV +K++ +E +YV++ NI AG GRF DAE++R++M +R KVPGCS
Sbjct: 393 GNAEVGERVAKKLMGLEPEKASNYVMLANIYAGAGRFEDAEKVRQLMKQRKLSKVPGCS 451
>gi|357487543|ref|XP_003614059.1| hypothetical protein MTR_5g044260 [Medicago truncatula]
gi|355515394|gb|AES97017.1| hypothetical protein MTR_5g044260 [Medicago truncatula]
Length = 565
Score = 252 bits (644), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 162/461 (35%), Positives = 249/461 (54%), Gaps = 52/461 (11%)
Query: 2 HILQNSQTPNNITTQIHSHLLTTNSLLHHSQLF--NTLLHFYSLAE-SPQKAFLLYKQLQ 58
H+L S + +++ QIH+ +L T +H F N L+ YS + QKA LLYK
Sbjct: 19 HLLNQSNSISHVK-QIHAQILRT---IHTPNSFTWNILIQSYSKSTLHKQKAILLYKA-- 72
Query: 59 QIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNM 118
I T + L P D TY F+++ CA L G Q+HA + K+GF+ Y+ +L++
Sbjct: 73 -IITEQENELFP--DKHTYPFVLKACAYLFSLFEGKQVHAHVLKLGFELDTYICNSLIHF 129
Query: 119 YVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGII 178
Y S G+L+ + K+FD M E W RNVVSW +I
Sbjct: 130 YASCGYLETARKVFDRMCE---------------W---------------RNVVSWNVMI 159
Query: 179 DGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKR-- 236
D Y ++ + L +F +M+ + EP T+ +V+ A G + +H + K+
Sbjct: 160 DSYAKVGDYDIVLIMFCEMM--KVYEPDCYTMQSVIRACGGLGSLSLGMWVHAFVLKKCD 217
Query: 237 GFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAV 296
D+ V CL+D Y KCG + A ++FE +S +++ SW SII GFA+HG K A+
Sbjct: 218 KNVVCDVLVNTCLVDMYCKCGSLEIAKQVFEGMSY--RDVSSWNSIILGFAVHGKAKAAL 275
Query: 297 ENFGRMQKV-GLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLID 355
+ F RM KV + PN +TF+ VL+AC+H G+V+EGL +F+ M +E V P + HYGCL+D
Sbjct: 276 DYFVRMVKVEKIVPNSITFVGVLSACNHSGMVDEGLMYFEMMTKEYNVEPSLVHYGCLVD 335
Query: 356 MLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGAC-SFHGNVEMGERVTRKILEMERGY- 413
+ RAG +++A +P + D V+WR+LL AC H +VE+ E + ++I E
Sbjct: 336 LYARAGHIQEALNVVSEMPIK-PDAVIWRSLLDACYKQHASVELSEEMAKQIFESNGSVC 394
Query: 414 GGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
GG YVL+ + A R+ D LR++M+++ K PGCSL+
Sbjct: 395 GGAYVLLSKVYASASRWNDVGLLRKLMNDKGVSKKPGCSLI 435
>gi|242050128|ref|XP_002462808.1| hypothetical protein SORBIDRAFT_02g032350 [Sorghum bicolor]
gi|241926185|gb|EER99329.1| hypothetical protein SORBIDRAFT_02g032350 [Sorghum bicolor]
Length = 638
Score = 252 bits (644), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 140/382 (36%), Positives = 224/382 (58%), Gaps = 5/382 (1%)
Query: 71 LFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSK 130
L D FT L+ C+ + +G +H + G + + + +ALV+MY G L + +
Sbjct: 210 LEDEFTLVSLLIACSQEGNLEIGRLVHCRMLVSGSRVDLILESALVDMYGKCGDLWMARR 269
Query: 131 LFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEA 190
F+ MP +++V+W M+ K G + AR F+ MP RN+VSW +I Y + + +EA
Sbjct: 270 CFEMMPIKSVVSWTSMLCAQTKHGSVNAARCWFDHMPERNIVSWNAMISCYVQRGQCHEA 329
Query: 191 LALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLI 250
L L+ +M + + P EIT++AVL A + GD+ +++H Y + D+ ++N L+
Sbjct: 330 LDLYNQMQS-QGLAPDEITLVAVLSASGRIGDLTVGKMVHLYIRDNIYNP-DVSLVNSLL 387
Query: 251 DTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPN 310
D YAKCG + +A LF ++ +N+VSW II G AMHG + + F M P+
Sbjct: 388 DMYAKCGQVDTAISLFSEMC--NRNVVSWNVIIGGLAMHGRALDTITFFRSMVTDSFAPD 445
Query: 311 RVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTA 370
+TF+++L+ACSHGGL+E G ++F+ M V +++HY C++D+LGR G LE+A
Sbjct: 446 GITFVALLSACSHGGLLETGQHYFESMRHVYNVKHEVEHYACMVDLLGRRGHLEKAVCLI 505
Query: 371 LGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRF 430
+P + DVVVW LLGAC HGNV++G +V +++LE+E GG +VL+ N+L ++
Sbjct: 506 KEMPMK-PDVVVWGALLGACRIHGNVKIGRQVIKQLLELEGISGGLFVLISNLLYETHQW 564
Query: 431 GDAERLRRVMDERNAFKVPGCS 452
D +RLR++M E K G S
Sbjct: 565 EDMKRLRKLMKEWGTRKDMGVS 586
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 98/393 (24%), Positives = 177/393 (45%), Gaps = 77/393 (19%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNL 92
++NT++ Y + P++A L++ + + LP + FT F+++ C
Sbjct: 79 MYNTIIRAYCNSSCPREALRLHRGMLR-----RGILP---NEFTLPFVVKACTIAQAREH 130
Query: 93 GTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVK 152
+H V ++G V+V AL++ Y S G L DS + FDEM +RN+V+WN MI G +
Sbjct: 131 ALAVHGVALRLGLVGQVFVGNALLHSYASAGSLGDSRRFFDEMVDRNVVSWNSMIGGYAQ 190
Query: 153 WGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILA 212
G+ SLF EM + + E T+++
Sbjct: 191 AGDTREVCSLFGEMRRQGFLE--------------------------------DEFTLVS 218
Query: 213 VLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVE 272
+L A Q G+++ +L+H G + D+ + + L+D Y KCG ++ A + FE + ++
Sbjct: 219 LLIACSQEGNLEIGRLVHCRMLVSG-SRVDLILESALVDMYGKCGDLWMARRCFEMMPIK 277
Query: 273 -----------------------------RKNLVSWTSIISGFAMHGMGKEAVENFGRMQ 303
+N+VSW ++IS + G EA++ + +MQ
Sbjct: 278 SVVSWTSMLCAQTKHGSVNAARCWFDHMPERNIVSWNAMISCYVQRGQCHEALDLYNQMQ 337
Query: 304 KVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRL 363
GL P+ +T ++VL+A G + G + + PD+ L+DM + G++
Sbjct: 338 SQGLAPDEITLVAVLSASGRIGDLTVG-KMVHLYIRDNIYNPDVSLVNSLLDMYAKCGQV 396
Query: 364 EQAEKTALGIPSEIT--DVVVWRTLLGACSFHG 394
+ TA+ + SE+ +VV W ++G + HG
Sbjct: 397 D----TAISLFSEMCNRNVVSWNVIIGGLAMHG 425
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/243 (31%), Positives = 120/243 (49%), Gaps = 7/243 (2%)
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
G L AR LF+ +P + V + II Y + EAL L R M+ P+E T+ V
Sbjct: 60 GVLCHARRLFDGIPGPDRVMYNTIIRAYCNSSCPREALRLHRGMLR-RGILPNEFTLPFV 118
Query: 214 LPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVER 273
+ A + +HG + G + V N L+ +YA G + + + F+++ V+R
Sbjct: 119 VKACTIAQAREHALAVHGVALRLGLVG-QVFVGNALLHSYASAGSLGDSRRFFDEM-VDR 176
Query: 274 KNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNF 333
N+VSW S+I G+A G +E FG M++ G + T +S+L ACS G +E G
Sbjct: 177 -NVVSWNSMIGGYAQAGDTREVCSLFGEMRRQGFLEDEFTLVSLLIACSQEGNLEIGRLV 235
Query: 334 FDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFH 393
+M+ + D+ L+DM G+ G L A + +P I VV W ++L A + H
Sbjct: 236 HCRMLVSGSRV-DLILESALVDMYGKCGDLWMARRCFEMMP--IKSVVSWTSMLCAQTKH 292
Query: 394 GNV 396
G+V
Sbjct: 293 GSV 295
>gi|359490816|ref|XP_002271825.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Vitis vinifera]
Length = 702
Score = 252 bits (644), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 142/386 (36%), Positives = 213/386 (55%), Gaps = 10/386 (2%)
Query: 73 DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLF 132
DSFT ++ CA ++ G ++HA G + +V ALV MY LK + F
Sbjct: 276 DSFTLGSVLAACADMASLRRGKEVHAQAVVRGLHWNTFVGGALVEMYSKCEDLKAAQLAF 335
Query: 133 DEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCR----NVVSWTGIIDGYTRMNRSN 188
D + ER+ TWNV+I+G +LE ++L ++M NV +W GII G+ +
Sbjct: 336 DGVTERDTATWNVLISGYACCNQLENIQNLIQKMKGDGFEPNVYTWNGIISGHVENGHNE 395
Query: 189 EALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNC 248
AL LF +M P T+ +LPA + + + +H + ++G+ D+ +
Sbjct: 396 LALRLFTEMQTSSL-RPDIYTVGIILPACARLATIARGKQVHAHSIRQGYE-LDVHIGAA 453
Query: 249 LIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLK 308
L+D YAKCG I A +++ IS NLVS ++++ +AMHG G E + F M G +
Sbjct: 454 LVDMYAKCGSIKHAMQVYNRIS--NPNLVSQNAMLTAYAMHGHGDEGIALFRNMLGNGFR 511
Query: 309 PNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEK 368
P+ VTFLSVL++C H G VE G FFD M V P +KHY C++D+L RAGRL++A +
Sbjct: 512 PDHVTFLSVLSSCVHAGAVETGHEFFDLMTYY-NVTPSLKHYTCIVDLLSRAGRLDEAYE 570
Query: 369 TALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVG 428
IP + D V+W LLG C GNVE+GE ++E+E G+YVL+ N+ A G
Sbjct: 571 LVKKIPRK-PDSVMWGALLGGCVIWGNVELGEIAAESLIELEPNNTGNYVLLANLYAYAG 629
Query: 429 RFGDAERLRRVMDERNAFKVPGCSLV 454
R+ D +R R+++ +R K PGCS +
Sbjct: 630 RWHDLDRTRQMIKDRGMHKSPGCSWI 655
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 102/378 (26%), Positives = 170/378 (44%), Gaps = 43/378 (11%)
Query: 36 TLLHFYSLAESPQKAFLLYKQLQQIYTHSH-SPLPPLFDSFTYSFLIRTCATLSHPNLGT 94
T L F S +PQ L H+H S L DS TY+ L+ +C TL NLG
Sbjct: 28 TNLSFQSPNSTPQSM-----HLSTAAHHTHLSLLDKQIDSSTYASLLESCRTL---NLGK 79
Query: 95 QLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWG 154
Q+HA K GF H +V T L+ MY G L D++ +F +MP+RNL +W +++ V G
Sbjct: 80 QVHAHTLKTGFHGHEFVETKLLQMYGRFGCLDDANLVFVKMPQRNLYSWTAILSVHVDHG 139
Query: 155 ELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVL 214
E A SLFE++ ++ + ++ L L R++
Sbjct: 140 YFEEALSLFEKLQLDDIGLEFFVFPVVLKLCGGLRVLELGRQLHGV-------------- 185
Query: 215 PAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERK 274
I + D+ S I GF+ ++ N +I Y + G + A +LF+ + + K
Sbjct: 186 -VIKRCADMGSALKIFS-----GFSVKNVVSYNTMIVGYCENGNVEKAKELFDQMELVGK 239
Query: 275 NLVSWTSIISGFAMHGMGKEAVENF-GRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNF 333
+ +SW S+ISG+A + + EA+ F + + G++ + T SVL AC+ + G
Sbjct: 240 DTISWNSMISGYADNLLFDEALSMFRDLLMEEGIEADSFTLGSVLAACADMASLRRG--- 296
Query: 334 FDKMVEECEVLPDIKHY-----GCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLG 388
K V V+ + H+ G L++M + L+ A+ G+ D W L+
Sbjct: 297 --KEVHAQAVVRGL-HWNTFVGGALVEMYSKCEDLKAAQLAFDGVTER--DTATWNVLIS 351
Query: 389 ACSFHGNVEMGERVTRKI 406
+ +E + + +K+
Sbjct: 352 GYACCNQLENIQNLIQKM 369
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 113/495 (22%), Positives = 195/495 (39%), Gaps = 83/495 (16%)
Query: 12 NITTQIHSHLLTTNSLLHHSQLFNT-LLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPP 70
N+ Q+H+H L T H + T LL Y A L++ ++ Q +S + +
Sbjct: 76 NLGKQVHAHTLKTG--FHGHEFVETKLLQMYGRFGCLDDANLVFVKMPQRNLYSWTAILS 133
Query: 71 -------------LFDS----------FTYSFLIRTCATLSHPNLGTQLHAVISKVGFQS 107
LF+ F + +++ C L LG QLH V+ K
Sbjct: 134 VHVDHGYFEEALSLFEKLQLDDIGLEFFVFPVVLKLCGGLRVLELGRQLHGVVIK----- 188
Query: 108 HVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMP 167
+M +L K+F +N+V++N MI G + G +E A+ LF++M
Sbjct: 189 ------RCADMGSAL-------KIFSGFSVKNVVSYNTMIVGYCENGNVEKAKELFDQME 235
Query: 168 C--RNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKS 225
++ +SW +I GY +EAL++FR ++ E E T+ +VL A ++
Sbjct: 236 LVGKDTISWNSMISGYADNLLFDEALSMFRDLLMEEGIEADSFTLGSVLAACADMASLRR 295
Query: 226 CQLIHGYGEKRGF------------------------------TAFDIRVLNCLIDTYAK 255
+ +H RG T D N LI YA
Sbjct: 296 GKEVHAQAVVRGLHWNTFVGGALVEMYSKCEDLKAAQLAFDGVTERDTATWNVLISGYAC 355
Query: 256 CGCIFSASKLFEDISVE--RKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVT 313
C + + L + + + N+ +W IISG +G + A+ F MQ L+P+ T
Sbjct: 356 CNQLENIQNLIQKMKGDGFEPNVYTWNGIISGHVENGHNELALRLFTEMQTSSLRPDIYT 415
Query: 314 FLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGI 373
+L AC+ + G + + L D+ L+DM + G ++ A + I
Sbjct: 416 VGIILPACARLATIARGKQVHAHSIRQGYEL-DVHIGAALVDMYAKCGSIKHAMQVYNRI 474
Query: 374 PSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDA 433
+ ++V +L A + HG+ + G + R +L G+ D+V ++L+ G
Sbjct: 475 SN--PNLVSQNAMLTAYAMHGHGDEGIALFRNML--GNGFRPDHVTFLSVLSSCVHAGAV 530
Query: 434 ERLRRVMDERNAFKV 448
E D + V
Sbjct: 531 ETGHEFFDLMTYYNV 545
>gi|225463123|ref|XP_002265412.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g34160-like [Vitis vinifera]
Length = 573
Score = 252 bits (644), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 163/457 (35%), Positives = 259/457 (56%), Gaps = 24/457 (5%)
Query: 3 ILQNSQTPNNITTQIHSHLLTTNSL-LHHSQLFNTLLHFYSLAESPQKAFLLYKQLQQIY 61
I+Q T ++I Q+ +HLLTT L S LL +L+ SP A+L Y +
Sbjct: 7 IIQKCTTLSHIK-QVQAHLLTTGQFNLRISPSRTRLLEHCALSPSP--AYLPYAA----H 59
Query: 62 THSHSPLPPLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVS 121
H H P P D ++ L+R A HP T +S + + + +L+ +
Sbjct: 60 IHRHIPHPSTND---FNALLRGLARGPHP---THALTFLSTILHPDALTFSFSLIASARA 113
Query: 122 LGFLKDSSKLFDEMPER----NLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGI 177
L L ++S++ + R +++ +I K G+L+ A+ +F+E+P R+V +W +
Sbjct: 114 LA-LSETSQIHSHLLRRGCHADILLGTTLIDAYAKCGDLDSAQRVFDEIPLRDVAAWNAL 172
Query: 178 IDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRG 237
I G + ++S+EALALF +M A E + +EI++L L A Q G +++ + +H K
Sbjct: 173 IAGLAQGSKSSEALALFNRMRA-EGEKINEISVLGALAACSQLGALRAGEGVHACVRKMD 231
Query: 238 FTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVE 297
+++V N +ID YAKCG ++F ++ K++V+W ++I FAMHG G A+E
Sbjct: 232 LD-INVQVCNAVIDMYAKCGFADKGFRVFSTMTCG-KSVVTWNTMIMAFAMHGDGCRALE 289
Query: 298 NFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDML 357
F M K ++ + VT+L+VL AC+H GLVEEG+ FD+MV V ++KHYG ++D+L
Sbjct: 290 LFEEMGKTQVEMDSVTYLAVLCACNHAGLVEEGVRLFDEMVGR-GVNRNVKHYGSVVDLL 348
Query: 358 GRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDY 417
GRAGRL +A + +P + DVV+W++LLGAC +GNVEM E +RK++EM GD+
Sbjct: 349 GRAGRLGEAYRIINSMPI-VPDVVLWQSLLGACKTYGNVEMAEMASRKLVEMGSNSCGDF 407
Query: 418 VLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
VL+ N+ A R+ D R+R M R+ KVPG S +
Sbjct: 408 VLLSNVYAARERWEDVGRVREAMKSRDVRKVPGFSYI 444
>gi|357118743|ref|XP_003561109.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08510-like [Brachypodium distachyon]
Length = 535
Score = 252 bits (644), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 136/404 (33%), Positives = 228/404 (56%), Gaps = 23/404 (5%)
Query: 71 LFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVG-FQS-HVYVNTALVNMYVSLGFLKDS 128
L +++FL+ + A SH HA++ K G F S ++ +ALV+ Y L ++
Sbjct: 84 LLTPLSFTFLLSSPAAASHAPFALCSHALLVKSGHFASGDPFLGSALVSFYAKSRLLDEA 143
Query: 129 SKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSN 188
++FDEMP R+ +N +++ + G ++ A LF EM RNVVSWT ++ GY + R
Sbjct: 144 RRVFDEMPRRDTAVYNALLSAYARCGLVDAAEKLFGEMTERNVVSWTAMVSGYAQNGRHE 203
Query: 189 EALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNC 248
A+ F +M +P+E+T+ +VLPA G ++ + Y +G ++ V N
Sbjct: 204 AAVETFLEMWEGAGVQPNELTVSSVLPACAAVGAMELGTKVEEYARGKGHLG-NVFVTNA 262
Query: 249 LIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQ----- 303
L++ YAKCG I A ++F+ I R++L SW ++I FA+HG+ EA+ F +++
Sbjct: 263 LLEMYAKCGSIQRAWQVFQGIG-HRRDLCSWNTMIMAFAVHGLWMEALALFHKLRVRISC 321
Query: 304 -------------KVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHY 350
G+KP+ +TF+ V+ AC+HGGLV+EG F+ M + + P I+HY
Sbjct: 322 SNSLVYFFSIPTHMTGVKPDGITFVGVILACTHGGLVDEGKLIFNSMEADFSINPRIEHY 381
Query: 351 GCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEME 410
GC++D+LGRAG L++A + +P+E D V+W LLGACSFHGN+E+ E K++ +E
Sbjct: 382 GCMVDLLGRAGLLKEAYSMIISMPAE-PDAVIWGALLGACSFHGNIELAETAVDKLMYLE 440
Query: 411 RGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
+ V++ NI A G++ ++ +++ E++ K G S +
Sbjct: 441 PQNTANLVILSNIYASSGKWDGVAQVWKLLKEKDHKKSAGYSFI 484
>gi|15232648|ref|NP_190263.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207666|sp|Q9STF3.1|PP265_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g46790, chloroplastic; AltName: Full=Protein
CHLORORESPIRATORY REDUCTION 2; Flags: Precursor
gi|5541680|emb|CAB51186.1| putative protein [Arabidopsis thaliana]
gi|110741961|dbj|BAE98921.1| hypothetical protein [Arabidopsis thaliana]
gi|332644684|gb|AEE78205.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 657
Score = 252 bits (644), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 139/423 (32%), Positives = 238/423 (56%), Gaps = 48/423 (11%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCA----TLS 88
++N L +LA ++ LY ++ +I S D FTY+++++ C T++
Sbjct: 145 VWNALFRALTLAGHGEEVLGLYWKMNRIGVES--------DRFTYTYVLKACVASECTVN 196
Query: 89 HPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMIT 148
H G ++HA +++ G+ SHVY+ T LV+MY
Sbjct: 197 HLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYA---------------------------- 228
Query: 149 GLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMV-ACEYTEPSE 207
++G +++A +F MP RNVVSW+ +I Y + ++ EAL FR+M+ + + P+
Sbjct: 229 ---RFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNS 285
Query: 208 ITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFE 267
+T+++VL A ++ +LIHGY +RG + + V++ L+ Y +CG + ++F+
Sbjct: 286 VTMVSVLQACASLAALEQGKLIHGYILRRGLDSI-LPVISALVTMYGRCGKLEVGQRVFD 344
Query: 268 DISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLV 327
+ +++VSW S+IS + +HG GK+A++ F M G P VTF+SVL ACSH GLV
Sbjct: 345 RM--HDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLV 402
Query: 328 EEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLL 387
EEG F+ M + + P I+HY C++D+LGRA RL++A K + +E VW +LL
Sbjct: 403 EEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTE-PGPKVWGSLL 461
Query: 388 GACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFK 447
G+C HGNVE+ ER +R++ +E G+YVL+ +I A + + +R++++++ R K
Sbjct: 462 GSCRIHGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLEHRGLQK 521
Query: 448 VPG 450
+PG
Sbjct: 522 LPG 524
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 111/443 (25%), Positives = 178/443 (40%), Gaps = 88/443 (19%)
Query: 55 KQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTA 114
KQ ++ + SP TY LI C S + ++H I G ++ T
Sbjct: 63 KQAIRVLSQESSP-----SQQTYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATK 117
Query: 115 LVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSW 174
L+ MY LG + + K+FD+ +R + WN + L G E L
Sbjct: 118 LIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGL------------ 165
Query: 175 TGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGE 234
Y +MNR F + SE T+ ++ + IH +
Sbjct: 166 ------YWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKG----------KEIHAHLT 209
Query: 235 KRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKE 294
+RG+++ + ++ L+D YA+ GC+ AS +F + V +N+VSW+++I+ +A +G E
Sbjct: 210 RRGYSSH-VYIMTTLVDMYARFGCVDYASYVFGGMPV--RNVVSWSAMIACYAKNGKAFE 266
Query: 295 AVENFGRMQK--VGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEEC--EVLPDIKHY 350
A+ F M + PN VT +SVL AC+ +E+G ++ +LP I
Sbjct: 267 ALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVI--- 323
Query: 351 GCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTL------------------------ 386
L+ M GR G+LE ++ + DVV W +L
Sbjct: 324 SALVTMYGRCGKLEVGQRVFDRMHDR--DVVSWNSLISSYGVHGYGKKAIQIFEEMLANG 381
Query: 387 -----------LGACSFHGNVEMGERVTRKILEMERGYG-----GDYVLMYNILAGVGRF 430
LGACS G VE G+R+ M R +G Y M ++L R
Sbjct: 382 ASPTPVTFVSVLGACSHEGLVEEGKRLFET---MWRDHGIKPQIEHYACMVDLLGRANRL 438
Query: 431 GDAERLRRVMDERNAFKVPGCSL 453
+A ++ + M KV G L
Sbjct: 439 DEAAKMVQDMRTEPGPKVWGSLL 461
>gi|242091784|ref|XP_002436382.1| hypothetical protein SORBIDRAFT_10g001540 [Sorghum bicolor]
gi|241914605|gb|EER87749.1| hypothetical protein SORBIDRAFT_10g001540 [Sorghum bicolor]
Length = 507
Score = 252 bits (644), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 134/362 (37%), Positives = 213/362 (58%), Gaps = 7/362 (1%)
Query: 97 HAVISKVGFQSHV---YVNTALVNMYVSLGFLKDSSKLFDEMP-ERNLVTWNVMITGLVK 152
HA++SK G + Y+ +ALV Y G L +S ++FDE+P + N +++ +
Sbjct: 104 HALLSKSGHAASSGDPYLASALVASYARSGHLAESRRVFDELPPHSDAAARNALLSAYAR 163
Query: 153 WGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILA 212
G ++ A SLF MP RNV+SWT ++ GY + R EA+ F +M P+E+T+ +
Sbjct: 164 CGRVDDAESLFAGMPDRNVISWTAMVSGYAQNGRHEEAVRTFLEMWEGCGVRPNEVTVSS 223
Query: 213 VLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVE 272
VLPA G + + + Y RG ++ V N L++ YAKCG I A +F I +
Sbjct: 224 VLPACAAVGALALGRKVERYARGRGMLT-NVYVANALVEMYAKCGSIRRAWMVFRGIGKQ 282
Query: 273 RKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLN 332
R +L SW S+I FA+HG+ +E + F +++ G KP+ +TF+ V+ AC+HGGLV+EG
Sbjct: 283 R-DLCSWNSMIMAFAVHGLWREVLGLFHKLRMTGAKPDGITFVGVILACTHGGLVDEGKL 341
Query: 333 FFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSF 392
F+ M EE + P I+HYGC++D+LGRAG L++A+ +P E D V+W LLGACSF
Sbjct: 342 LFNSMREEFGLKPRIEHYGCMVDLLGRAGLLKEADSLIASMPME-PDAVIWGALLGACSF 400
Query: 393 HGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCS 452
HGN+E+ E K++ +E + V++ NI A G++ ++ +++ E++ K G S
Sbjct: 401 HGNLELAEVAVEKLMRLEPQNTANLVILSNIYASHGKWDGVAQVWKLLKEKDHKKSAGYS 460
Query: 453 LV 454
+
Sbjct: 461 FI 462
>gi|297843364|ref|XP_002889563.1| PDE247 [Arabidopsis lyrata subsp. lyrata]
gi|297335405|gb|EFH65822.1| PDE247 [Arabidopsis lyrata subsp. lyrata]
Length = 500
Score = 252 bits (644), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 138/365 (37%), Positives = 215/365 (58%), Gaps = 7/365 (1%)
Query: 92 LGTQLHAVISKVGF-QSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGL 150
LG LH K+G ++HV V TA++ MY G +K + +FD M ++N VTWN MI G
Sbjct: 91 LGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRVKKARCVFDYMEDKNSVTWNTMIDGY 150
Query: 151 VKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITI 210
++ G+++ A +F++MP R+++SWT +I+G+ EALA FR+M +P + I
Sbjct: 151 MRSGQVDNAAKMFDKMPERDLISWTAMINGFVNKGFHEEALAWFREM-QISGVKPDYVAI 209
Query: 211 LAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDIS 270
+A L A G + +H Y + F ++RV N LID Y +CGC+ A ++F+ +
Sbjct: 210 IAALNACTNLGALSFGLWVHRYVMSQDFKN-NVRVSNSLIDLYCRCGCVEFARQVFDKM- 267
Query: 271 VERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEG 330
E++ +VSW S+I GFA +G E++ F +MQ+ KP+ VTF L ACSH GLVEEG
Sbjct: 268 -EKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEERFKPDAVTFTGALTACSHVGLVEEG 326
Query: 331 LNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGAC 390
L +F M+ + + P I+HYGCL+D+ RAGRLE A K +P + +VV+ +LL AC
Sbjct: 327 LRYFQIMISDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIG-SLLAAC 385
Query: 391 SFHG-NVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVP 449
HG N + E++ + + ++ +YV++ N+ A G++ A ++RR M K P
Sbjct: 386 RNHGNNTVLAEKLMKHLTDLNVKSHSNYVILSNMYAADGKWEGASKMRRKMKGLGLKKQP 445
Query: 450 GCSLV 454
G S +
Sbjct: 446 GFSSI 450
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 93/214 (43%), Gaps = 41/214 (19%)
Query: 81 IRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNL 140
+ C L + G +H + F+++V V+ +L+++Y G ++ + ++FD+M +R +
Sbjct: 213 LNACTNLGALSFGLWVHRYVMSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFDKMEKRTV 272
Query: 141 VTWNVMITGLVKWG----ELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRK 196
V+WN +I G G L + R + EE + V++TG + + + E L F+
Sbjct: 273 VSWNSVIVGFAANGNAHESLVYFRKMQEERFKPDAVTFTGALTACSHVGLVEEGLRYFQI 332
Query: 197 MVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKC 256
M++ D + I YG CL+D Y++
Sbjct: 333 MIS----------------------DYRISPRIEHYG--------------CLVDLYSRA 356
Query: 257 GCIFSASKLFEDISVERKNLVSWTSIISGFAMHG 290
G + A KL + + + + N V S+++ HG
Sbjct: 357 GRLEDALKLVQSMPM-KPNEVVIGSLLAACRNHG 389
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 67/142 (47%), Gaps = 10/142 (7%)
Query: 274 KNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNF 333
+N VSWTS I+ +G EA + F M+ G++PN +TF+++L+ C G G
Sbjct: 34 ENTVSWTSRITLLTRNGRLAEAAKEFSDMRLAGVEPNHITFIAILSGC---GDFPSGSEA 90
Query: 334 FDKMVE--ECEVLPDIKHY---GCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLG 388
++ C++ D H +I M + GR+++A + E + V W T++
Sbjct: 91 LGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRVKKAR--CVFDYMEDKNSVTWNTMID 148
Query: 389 ACSFHGNVEMGERVTRKILEME 410
G V+ ++ K+ E +
Sbjct: 149 GYMRSGQVDNAAKMFDKMPERD 170
>gi|225427280|ref|XP_002278897.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Vitis vinifera]
Length = 719
Score = 252 bits (644), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 152/482 (31%), Positives = 240/482 (49%), Gaps = 74/482 (15%)
Query: 35 NTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLGT 94
NT++ Y P A Y +Q+ +P + +T+ L++ C + G
Sbjct: 127 NTIMRTYVNVNDPYTALGFY--YEQMVRKCVAP-----NHYTFPLLVKVCWEIGSIGDGE 179
Query: 95 QLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSS------------------------- 129
++HA I K GF+ ++V +L++MY G + D+
Sbjct: 180 KIHARILKFGFELDLFVRNSLIHMYSVCGRIGDARAMFEVCSISDLVTWNSMIDGYVKNG 239
Query: 130 ------KLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYT- 182
+LF+EMPER+L +WN MI G V G++ A LF +MP R++VSW +IDGY
Sbjct: 240 EIGAARELFEEMPERDLFSWNSMIAGYVGNGDMTAAEDLFNKMPFRDIVSWNCMIDGYAQ 299
Query: 183 ------------------------------RMNRSNEALALFRKMVACEYTEPSEITILA 212
R+ +E L +F KM+ T P+E T+++
Sbjct: 300 VQNMEIACELFNWMPYRNVVSWNIMLALYVRIKDYDECLRMFDKMMG--ETMPNEATLVS 357
Query: 213 VLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVE 272
VL A G + + IH Y + D+ + L+ YAKCG + A +F+ +S
Sbjct: 358 VLTACAHLGRLDRGKWIHSYIKNNRVIEPDVLLSTALLTMYAKCGAMDLARDVFDKMS-- 415
Query: 273 RKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLN 332
+++VSW S+I G+ MHG +A+E F M+K G PN TF+ VL+AC+H G++ EG
Sbjct: 416 NRSVVSWNSMIMGYGMHGQADKALEMFLDMEKRGPMPNDATFICVLSACAHSGMILEGWW 475
Query: 333 FFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSF 392
+FD M ++ P ++HYGC++D+LGRAG ++ E+ +P E +W LL AC
Sbjct: 476 YFDLMRRAYKIEPKVEHYGCMVDLLGRAGLMKDLEELIRKMPME-GGTALWGALLSACRT 534
Query: 393 HGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCS 452
H N E+ E V ++++E+E G Y+L+ NI A G++ D E +R++M ER K G S
Sbjct: 535 HSNSELAEIVAKRLIELEPRDIGPYLLLSNIYAAEGKWDDVEIVRKMMKERGLTKTTGFS 594
Query: 453 LV 454
V
Sbjct: 595 WV 596
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 102/233 (43%), Gaps = 14/233 (6%)
Query: 156 LEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLP 215
++ A SLFE + + I+ Y +N AL + + + + P+ T ++
Sbjct: 108 VQHAVSLFEGLEEPDAFICNTIMRTYVNVNDPYTALGFYYEQMVRKCVAPNHYTFPLLVK 167
Query: 216 AIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKN 275
W+ G + + IH K GF D+ V N LI Y+ CG I A +FE S+ +
Sbjct: 168 VCWEIGSIGDGEKIHARILKFGFE-LDLFVRNSLIHMYSVCGRIGDARAMFEVCSI--SD 224
Query: 276 LVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFD 335
LV+W S+I G+ +G A E F M + L ++ S++ G + + F+
Sbjct: 225 LVTWNSMIDGYVKNGEIGAARELFEEMPERDL----FSWNSMIAGYVGNGDMTAAEDLFN 280
Query: 336 KMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLG 388
KM DI + C+ID + +E A + +P +VV W +L
Sbjct: 281 KM-----PFRDIVSWNCMIDGYAQVQNMEIACELFNWMPYR--NVVSWNIMLA 326
>gi|449438554|ref|XP_004137053.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g21090-like [Cucumis sativus]
Length = 611
Score = 252 bits (644), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 138/421 (32%), Positives = 238/421 (56%), Gaps = 12/421 (2%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+NT++ Y+ +A LY+ ++ L F++F+++ ++ C L L
Sbjct: 163 WNTIVLAYAKQGCFNEAIGLYRDFRR--------LDMGFNAFSFAGVLILCVKLKELQLA 214
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
Q+H + GF S++ +++++V+ Y G ++ + LFDEM +++ W +++G KW
Sbjct: 215 KQVHGQVLVAGFLSNLVLSSSIVDAYAKCGEMRCARTLFDEMLVKDIHAWTTIVSGYAKW 274
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
G++ A LF +MP +N VSW+ +I GY R + +EAL F KM+ P + T +
Sbjct: 275 GDMNSASELFHQMPEKNPVSWSALISGYARNSLGHEALDYFTKMMKFG-INPEQYTFSSC 333
Query: 214 LPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVER 273
L A +K + +HGY + F I V++ LID Y+KCG + ++ +F + +
Sbjct: 334 LCACASIAALKHGKQVHGYLIRTYFRCNTI-VVSSLIDMYSKCGMLEASCCVFHLMG-NK 391
Query: 274 KNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNF 333
+++V W ++IS A +G G++A++ F M + GLKP+R+TF+ +L+ACSH GLV+EGL F
Sbjct: 392 QDVVVWNTMISALAQNGHGEKAMQMFNDMVESGLKPDRITFIVILSACSHSGLVQEGLRF 451
Query: 334 FDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFH 393
F M + V PD +HY CLID+LGRAG + + + D VW LLG C H
Sbjct: 452 FKAMTYDHGVFPDQEHYSCLIDLLGRAGCFVELVNELENMSCKPDD-RVWSALLGVCRIH 510
Query: 394 GNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSL 453
N+E+G +V +++E++ YV + ++ A +G++ E++R +MDE+ K G S
Sbjct: 511 NNIELGRKVAERVIELKPQSSAAYVSLASLYAFLGKWESVEKVRELMDEKFIRKERGISW 570
Query: 454 V 454
+
Sbjct: 571 I 571
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 108/386 (27%), Positives = 179/386 (46%), Gaps = 44/386 (11%)
Query: 80 LIRTCATLSHPNLGTQLHAVISKVGFQS-HVYVNTALVNMYVSLGFLKDSSKLFDEMPER 138
L+R CA + G +H + GF+ V L+ MY G ++ K+FD+M R
Sbjct: 68 LLRLCAKAKYFKGGKCVHLHLKHTGFKRPTTIVANHLIGMYFECGRDVEARKVFDKMSVR 127
Query: 139 NLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMV 198
NL +WN M+ G K G++ AR LF+ M ++VVSW I+ Y + NEA+ L+R
Sbjct: 128 NLYSWNHMLAGYAKLGDVNNARKLFDRMMEKDVVSWNTIVLAYAKQGCFNEAIGLYRDFR 187
Query: 199 ACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGC 258
+ + + VL + +++ + +HG GF + ++ + + ++D YAKCG
Sbjct: 188 RLDMG-FNAFSFAGVLILCVKLKELQLAKQVHGQVLVAGFLS-NLVLSSSIVDAYAKCGE 245
Query: 259 IFSASKLFEDISVE-----------------------------RKNLVSWTSIISGFAMH 289
+ A LF+++ V+ KN VSW+++ISG+A +
Sbjct: 246 MRCARTLFDEMLVKDIHAWTTIVSGYAKWGDMNSASELFHQMPEKNPVSWSALISGYARN 305
Query: 290 GMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVE---ECEVLPD 346
+G EA++ F +M K G+ P + TF S L AC+ ++ G ++ C +
Sbjct: 306 SLGHEALDYFTKMMKFGINPEQYTFSSCLCACASIAALKHGKQVHGYLIRTYFRCNTIV- 364
Query: 347 IKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKI 406
LIDM + G LE A + DVVVW T++ A + +G+ GE+ +
Sbjct: 365 ---VSSLIDMYSKCGMLE-ASCCVFHLMGNKQDVVVWNTMISALAQNGH---GEKAMQMF 417
Query: 407 LEM-ERGYGGDYVLMYNILAGVGRFG 431
+M E G D + IL+ G
Sbjct: 418 NDMVESGLKPDRITFIVILSACSHSG 443
>gi|356567066|ref|XP_003551744.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Glycine max]
Length = 488
Score = 252 bits (644), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 146/389 (37%), Positives = 235/389 (60%), Gaps = 15/389 (3%)
Query: 73 DSFTYSFLIRT---CATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSS 129
D F+++FL+++ L+H N +H + K GF H++V L++ Y + G +
Sbjct: 106 DQFSFNFLLKSRSRTTPLTHHN---DVHGAVLKFGFCRHLHVQNGLIHFYANRGMTLLAR 162
Query: 130 KLFDEMP----ERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMN 185
++F+++ E ++V+W+ ++ VK GELE AR +F+EMP R+VVSWT ++ GY++
Sbjct: 163 RVFEDVLQLGLEVDVVSWSGLLVAHVKAGELEVARRVFDEMPQRDVVSWTAMLTGYSQAK 222
Query: 186 RSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRV 245
R EAL LF +M P E+T+++++ A GD+++ ++H + E+ GF + + +
Sbjct: 223 RPREALELFGEMRRSG-VWPDEVTMVSLVSACASLGDMETGMMVHRFVEENGF-GWMVAL 280
Query: 246 LNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKV 305
N LID Y KCGC+ A ++F ++ RK+L++W ++++ A +G EA F M
Sbjct: 281 CNALIDMYGKCGCLEEAWRVFHGMT--RKSLITWNTMVTVCANYGNADEAFRLFEWMVCS 338
Query: 306 GLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQ 365
G+ P+ VT L++L A +H GLV+EG+ F+ M + V P I+HYG +IDMLGRAGRL++
Sbjct: 339 GVVPDSVTLLALLVAYAHKGLVDEGIRLFESMDRDYGVEPRIEHYGAVIDMLGRAGRLQE 398
Query: 366 AEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILA 425
A IP D VW LLGAC HG+VEMGE++ +K+LE++ GG Y+L+ +I
Sbjct: 399 AYDLLTNIPIPCND-AVWGALLGACRIHGDVEMGEKLIKKLLELKPDEGGYYILLRDIYV 457
Query: 426 GVGRFGDAERLRRVMDERNAFKVPGCSLV 454
G+ +A R+ M A K PGCS V
Sbjct: 458 AAGQTVEANETRQAMLASRARKNPGCSWV 486
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 127/282 (45%), Gaps = 38/282 (13%)
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
G+L +A +F++MP + +I + + + F M P + + +
Sbjct: 55 GDLRYAHRMFDQMPHPTTFFYNTLIRAHAHSTTPSLSSLSFNLMRQ-NNVAPDQFSFNFL 113
Query: 214 LPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDI---- 269
L + + + +HG K GF + V N LI YA G A ++FED+
Sbjct: 114 LKSRSRTTPLTHHNDVHGAVLKFGFCR-HLHVQNGLIHFYANRGMTLLARRVFEDVLQLG 172
Query: 270 -----------------------------SVERKNLVSWTSIISGFAMHGMGKEAVENFG 300
+ ++++VSWT++++G++ +EA+E FG
Sbjct: 173 LEVDVVSWSGLLVAHVKAGELEVARRVFDEMPQRDVVSWTAMLTGYSQAKRPREALELFG 232
Query: 301 RMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRA 360
M++ G+ P+ VT +S+++AC+ G +E G+ + VEE + LIDM G+
Sbjct: 233 EMRRSGVWPDEVTMVSLVSACASLGDMETGM-MVHRFVEENGFGWMVALCNALIDMYGKC 291
Query: 361 GRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERV 402
G LE+A + G+ + ++ W T++ C+ +GN + R+
Sbjct: 292 GCLEEAWRVFHGMTRK--SLITWNTMVTVCANYGNADEAFRL 331
>gi|334184919|ref|NP_182060.2| chlororespiratory reduction 4 protein [Arabidopsis thaliana]
gi|218546767|sp|O22137.2|PP202_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g45350, chloroplastic; AltName: Full=Protein
CHLORORESPIRATORY REDUCTION 4; Flags: Precursor
gi|330255448|gb|AEC10542.1| chlororespiratory reduction 4 protein [Arabidopsis thaliana]
Length = 613
Score = 252 bits (644), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 135/344 (39%), Positives = 210/344 (61%), Gaps = 8/344 (2%)
Query: 113 TALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVV 172
++++ YV G ++D+ LFD MP R++VTW MI G K G + A++LF++MP R+VV
Sbjct: 256 NSMIDGYVKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDVV 315
Query: 173 SWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGY 232
++ ++ GY + EAL +F M + P + T++ VLPAI Q G + +H Y
Sbjct: 316 AYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLY 375
Query: 233 -GEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGM 291
EK+ + + V LID Y+KCG I A +FE I E K++ W ++I G A+HG+
Sbjct: 376 IVEKQFYLGGKLGV--ALIDMYSKCGSIQHAMLVFEGI--ENKSIDHWNAMIGGLAIHGL 431
Query: 292 GKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYG 351
G+ A + +++++ LKP+ +TF+ VLNACSH GLV+EGL F+ M + ++ P ++HYG
Sbjct: 432 GESAFDMLLQIERLSLKPDDITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYG 491
Query: 352 CLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMER 411
C++D+L R+G +E A+ +P E D V+WRT L ACS H E GE V + ++ ++
Sbjct: 492 CMVDILSRSGSIELAKNLIEEMPVEPND-VIWRTFLTACSHHKEFETGELVAKHLI-LQA 549
Query: 412 GYG-GDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
GY YVL+ N+ A G + D R+R +M ER K+PGCS +
Sbjct: 550 GYNPSSYVLLSNMYASFGMWKDVRRVRTMMKERKIEKIPGCSWI 593
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 115/447 (25%), Positives = 212/447 (47%), Gaps = 54/447 (12%)
Query: 1 MHILQNSQTPNNITTQIHSHLLTTNSLLHHSQLFNTLLHFYS-----LAESPQKAFLLYK 55
+H+L + +T +++ QIH L+ T + + + +L F S LA+ + F Y
Sbjct: 16 IHVLGSCKTSDDVN-QIHGRLIKTGIIKNSNLTTRIVLAFASSRRPYLADFARCVFHEYH 74
Query: 56 QLQ--------------QIYTHSHSPLPPL--------------FDSFTYSFLIRTCATL 87
I +HSH P D F+ S +++ C+ L
Sbjct: 75 VCSFSFGEVEDPFLWNAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSLSLVLKACSRL 134
Query: 88 SHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMI 147
G Q+H + K G S +++ L+ +Y+ G L S ++FD MP+R+ V++N MI
Sbjct: 135 GFVKGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMI 194
Query: 148 TGLVKWGELEFARSLFEEMP--CRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEP 205
G VK G + AR LF+ MP +N++SW +I GY ++++ + + K+ A + E
Sbjct: 195 DGYVKCGLIVSARELFDLMPMEMKNLISWNSMISGYA---QTSDGVDIASKLFA-DMPEK 250
Query: 206 SEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKL 265
I+ +++ ++G ++ + + +R D+ +ID YAK G + A L
Sbjct: 251 DLISWNSMIDGYVKHGRIEDAKGLFDVMPRR-----DVVTWATMIDGYAKLGFVHHAKTL 305
Query: 266 FEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVG-LKPNRVTFLSVLNACSHG 324
F+ + +++V++ S+++G+ + EA+E F M+K L P+ T + VL A +
Sbjct: 306 FDQMP--HRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQL 363
Query: 325 GLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWR 384
G + + ++ +VE+ L K LIDM + G ++ A GI ++ D W
Sbjct: 364 GRLSKAIDMHLYIVEKQFYLGG-KLGVALIDMYSKCGSIQHAMLVFEGIENKSID--HWN 420
Query: 385 TLLGACSFHGNVEMGERVTRKILEMER 411
++G + HG +GE +L++ER
Sbjct: 421 AMIGGLAIHG---LGESAFDMLLQIER 444
>gi|212274581|ref|NP_001130403.1| uncharacterized protein LOC100191499 [Zea mays]
gi|194689034|gb|ACF78601.1| unknown [Zea mays]
gi|413932819|gb|AFW67370.1| hypothetical protein ZEAMMB73_996266 [Zea mays]
Length = 606
Score = 252 bits (644), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 140/382 (36%), Positives = 213/382 (55%), Gaps = 37/382 (9%)
Query: 73 DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLF 132
D++T+ L++ CA G Q HAV K+G H YV L+NMY
Sbjct: 132 DTYTFVSLLKACAAARAGEHGRQAHAVAVKLGAAGHDYVRPTLINMYA------------ 179
Query: 133 DEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALA 192
+ G+ AR F VVS+ +I R +R EAL
Sbjct: 180 -------------------ECGDARAARVTFGRADGDCVVSYNAMIAAAVRSSRPGEALV 220
Query: 193 LFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDT 252
LFR+M A + P+ +T+++VL A G ++ + +H Y K G + ++V L+D
Sbjct: 221 LFREMQA-KGLNPTPVTVISVLSACALLGALQLGRWLHDYVRKLGLGSL-VKVSTALVDM 278
Query: 253 YAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRV 312
YAKCG + A +F+ +E ++ +W+ +I +A HG G+EA+ F M+K G+KP+ +
Sbjct: 279 YAKCGSLEDAIAVFQ--GMESRDRQAWSVMIVAYANHGYGREAISLFEEMKKQGMKPDDI 336
Query: 313 TFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALG 372
TFL +L ACSH GLV EGL +FD M + ++P IKHYGC+ D+L R+G+LE+A K
Sbjct: 337 TFLGLLYACSHSGLVSEGLRYFDDMKDH-GIVPGIKHYGCVTDLLARSGQLERAYKFIDE 395
Query: 373 IPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGD 432
+P T ++ WRTLL AC HG+VE+G+RV +ILE++ +GGDYV+ N+ A G + +
Sbjct: 396 LPINPTPIL-WRTLLSACGGHGDVELGKRVFERILELDDSHGGDYVIFSNLCANTGYWEE 454
Query: 433 AERLRRVMDERNAFKVPGCSLV 454
R+R++M ++ KVPGCS +
Sbjct: 455 MNRVRKLMSDKGVVKVPGCSSI 476
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 78/322 (24%), Positives = 132/322 (40%), Gaps = 53/322 (16%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+N ++ + P +A +L++++Q +P P T ++ CA L LG
Sbjct: 202 YNAMIAAAVRSSRPGEALVLFREMQ---AKGLNPTP-----VTVISVLSACALLGALQLG 253
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
LH + K+G S V V+TALV+MY G L+D+ +F M R+ W+VMI
Sbjct: 254 RWLHDYVRKLGLGSLVKVSTALVDMYAKCGSLEDAIAVFQGMESRDRQAWSVMIVAYANH 313
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
G A SLFEEM + + +P +IT L +
Sbjct: 314 GYGREAISLFEEMKKQGM--------------------------------KPDDITFLGL 341
Query: 214 LPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVER 273
L A +G V + G I+ C+ D A+ G + A K +++ +
Sbjct: 342 LYACSHSGLVSEGLRYFDDMKDHGIVP-GIKHYGCVTDLLARSGQLERAYKFIDELPINP 400
Query: 274 KNLVSWTSIISGFAMHG---MGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEG 330
++ W +++S HG +GK E + + ++ N C++ G EE
Sbjct: 401 TPIL-WRTLLSACGGHGDVELGKRVFERILELD----DSHGGDYVIFSNLCANTGYWEE- 454
Query: 331 LNFFDKMVEECEVLPDIKHYGC 352
+N K++ + V +K GC
Sbjct: 455 MNRVRKLMSDKGV---VKVPGC 473
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 97/395 (24%), Positives = 152/395 (38%), Gaps = 54/395 (13%)
Query: 64 SHSPLPPLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLG 123
S +P PL + +R A QLHA K G +H + T L+ + G
Sbjct: 21 SAAPQHPLLSHLPHCTSLRGLA---------QLHAAAVKAGLAAHPALVTRLLTLCTGPG 71
Query: 124 FLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSW-TGIIDGYT 182
L +AR +F+ + + W ++ GY
Sbjct: 72 ---------------------------AGPAHLAYARQVFDRVTQPSDAVWYNTLLRGYA 104
Query: 183 R-----MNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRG 237
R + S A+ +F +M+ E P T +++L A + + H K G
Sbjct: 105 RSSSSSSSSSAAAVRVFVRMLE-EGVAPDTYTFVSLLKACAAARAGEHGRQAHAVAVKLG 163
Query: 238 FTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVE 297
D V LI+ YA+CG +A F + +VS+ ++I+ EA+
Sbjct: 164 AAGHDY-VRPTLINMYAECGDARAARVTFG--RADGDCVVSYNAMIAAAVRSSRPGEALV 220
Query: 298 NFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDML 357
F MQ GL P VT +SVL+AC+ G ++ G D V + + +K L+DM
Sbjct: 221 LFREMQAKGLNPTPVTVISVLSACALLGALQLGRWLHD-YVRKLGLGSLVKVSTALVDMY 279
Query: 358 GRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMER-GYGGD 416
+ G LE A G+ S D W ++ A + HG G EM++ G D
Sbjct: 280 AKCGSLEDAIAVFQGMESR--DRQAWSVMIVAYANHG---YGREAISLFEEMKKQGMKPD 334
Query: 417 YVLMYNILAGVGRFG-DAERLRRVMDERNAFKVPG 450
+ +L G +E LR D ++ VPG
Sbjct: 335 DITFLGLLYACSHSGLVSEGLRYFDDMKDHGIVPG 369
>gi|357146237|ref|XP_003573921.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Brachypodium distachyon]
Length = 531
Score = 252 bits (643), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 142/375 (37%), Positives = 210/375 (56%), Gaps = 9/375 (2%)
Query: 83 TCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVT 142
+C P G +HA I G + V+V+T L+ +Y G + + ++FD MP ++ +
Sbjct: 127 SCTARRSP--GRMVHAFIVACGIEPDVFVSTELIRVYGERGEMTVARRVFDSMPTKSTIA 184
Query: 143 WNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACE- 201
WN M+ V+ ++E A LF MP R+VVSW +I GY + R EAL LFR+MV+
Sbjct: 185 WNTMVHQYVRNKDIEAAYRLFLAMPRRDVVSWNTVIAGYCLVGRCKEALGLFRQMVSPSS 244
Query: 202 -YTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLN-CLIDTYAKCGCI 259
P+ T+ VL A G +++ +H Y +K D L+ CLID YAKCG I
Sbjct: 245 CTVHPNGPTMSTVLSACAGAGCLETGIWVHLYIDKNQMN--DNGTLDRCLIDMYAKCGSI 302
Query: 260 FSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLN 319
A ++FE +R +L SWT++I G AMHG + + F MQ G+ P+ VTF+ VLN
Sbjct: 303 DKALQVFEKAPGKR-DLYSWTTVICGLAMHGRANDVLRMFSMMQDSGMCPDDVTFVGVLN 361
Query: 320 ACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITD 379
AC+HGGLV+EGL+ F M E+ + P I+HYGC+ID+LGR GRL +A + +P + +
Sbjct: 362 ACAHGGLVDEGLHHFYSMQEKYRITPKIEHYGCMIDLLGRVGRLPEAYRMIQTMPMK-PN 420
Query: 380 VVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRV 439
+V+W L AC H +VE+GE ++ ++ V+M ++ A + R RR
Sbjct: 421 MVIWGAFLSACKVHSSVELGEIAAAEVTRLDPDDPWARVMMSSMYAKAQDWSGLARERRE 480
Query: 440 MDERNAFKVPGCSLV 454
M+ K PGCS V
Sbjct: 481 MNSLQMKKTPGCSSV 495
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 83/320 (25%), Positives = 149/320 (46%), Gaps = 30/320 (9%)
Query: 93 GTQLHAVISKVGF-QSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLV 151
+ +H ++ K G + ++ TAL++ Y +LG + LFDEMP ++LV M
Sbjct: 29 ASGIHCLLFKAGLLHAGAHLPTALLSAYGALGRSGHARDLFDEMPNQSLVARTAMARAHA 88
Query: 152 KWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRS-NEALALFRKMVACEYTEPSEITI 210
G+ A LF++M I DG+ N + LA +C +
Sbjct: 89 VSGQAAQALDLFQDM----------IADGFMPDNVALAVVLAACHGAGSCTARRSPGRMV 138
Query: 211 LAVLPAIWQNGDV-KSCQLIHGYGE-------KRGFTAFDIR---VLNCLIDTYAKCGCI 259
A + A DV S +LI YGE +R F + + N ++ Y + I
Sbjct: 139 HAFIVACGIEPDVFVSTELIRVYGERGEMTVARRVFDSMPTKSTIAWNTMVHQYVRNKDI 198
Query: 260 FSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRM---QKVGLKPNRVTFLS 316
+A +LF +++ R+++VSW ++I+G+ + G KEA+ F +M + PN T +
Sbjct: 199 EAAYRLF--LAMPRRDVVSWNTVIAGYCLVGRCKEALGLFRQMVSPSSCTVHPNGPTMST 256
Query: 317 VLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSE 376
VL+AC+ G +E G+ + +++ ++ + CLIDM + G +++A + P +
Sbjct: 257 VLSACAGAGCLETGI-WVHLYIDKNQMNDNGTLDRCLIDMYAKCGSIDKALQVFEKAPGK 315
Query: 377 ITDVVVWRTLLGACSFHGNV 396
D+ W T++ + HG
Sbjct: 316 -RDLYSWTTVICGLAMHGRA 334
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/259 (22%), Positives = 106/259 (40%), Gaps = 43/259 (16%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+NT++ Y L ++A L++Q+ + + P P T S ++ CA G
Sbjct: 216 WNTVIAGYCLVGRCKEALGLFRQMVSPSSCTVHPNGP-----TMSTVLSACAGAGCLETG 270
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMP-ERNLVTWNVMITGLVK 152
+H I K + ++ L++MY G + + ++F++ P +R+L +W +I GL
Sbjct: 271 IWVHLYIDKNQMNDNGTLDRCLIDMYAKCGSIDKALQVFEKAPGKRDLYSWTTVICGLAM 330
Query: 153 WGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILA 212
G R+N+ L +F M P ++T +
Sbjct: 331 HG-------------------------------RANDVLRMFSMMQDSGMC-PDDVTFVG 358
Query: 213 VLPAIWQNGDVKSCQLIHGYG--EKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDIS 270
VL A G V L H Y EK T I C+ID + G + A ++ + +
Sbjct: 359 VLNACAHGGLVDE-GLHHFYSMQEKYRITP-KIEHYGCMIDLLGRVGRLPEAYRMIQTMP 416
Query: 271 VERKNLVSWTSIISGFAMH 289
+ + N+V W + +S +H
Sbjct: 417 M-KPNMVIWGAFLSACKVH 434
>gi|345505216|gb|AEN99832.1| chlororespiratory reduction 4 [Capsella bursa-pastoris]
Length = 617
Score = 252 bits (643), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 135/344 (39%), Positives = 209/344 (60%), Gaps = 8/344 (2%)
Query: 113 TALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVV 172
++++ YV G ++D+ LFD MP R++VTW MI G K G + A++LF++MP R+VV
Sbjct: 260 NSMIDGYVKHGRIEDAKDLFDAMPRRDVVTWATMIDGYAKLGFVHQAKTLFDQMPHRDVV 319
Query: 173 SWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGY 232
S+ ++ GY + EAL +F M + P E T++ VL AI Q G + +H Y
Sbjct: 320 SYNSMMAGYVQNKYHMEALEIFSDMEKESHLSPDETTLVIVLSAIAQLGRLSKAMDMHLY 379
Query: 233 -GEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGM 291
EK+ F + V LID Y+KCG I A +FE I E K++ W ++I G A+HG+
Sbjct: 380 IVEKQFFLGGKLGV--ALIDMYSKCGSIQHAMLVFEGI--ENKSIDHWNAMIGGLAIHGL 435
Query: 292 GKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYG 351
G+ A + ++++ +KP+ +TF+ VLNACSH GLV+EGL F+ M + ++ P ++HYG
Sbjct: 436 GESAFDMLLQIERRSIKPDDITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYG 495
Query: 352 CLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMER 411
C++D+L R+G +E A+ +P E D V+WRT L AC+ H E GE V + ++ ++
Sbjct: 496 CMVDILSRSGSIELAKNLIQEMPIEPND-VIWRTFLTACNHHKEFETGELVGKHLI-LQA 553
Query: 412 GYG-GDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
GY YVL+ N+ A G++ D R+R +M ER K+PGCS +
Sbjct: 554 GYNPSSYVLLSNMYASFGKWKDVRRIRTMMKERKIEKIPGCSWI 597
Score = 148 bits (373), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 104/382 (27%), Positives = 196/382 (51%), Gaps = 28/382 (7%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNL 92
L+N ++ +S + P++A LL+ + + D F+ S +++ C+ L
Sbjct: 92 LWNAVIKSHSHGKDPKQALLLFCLMLENGVS--------VDKFSMSLVLKACSRLGFVKG 143
Query: 93 GTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVK 152
G Q+H ++ K G S +++ L+ +Y+ G L + ++FD MP+R+ V++N MI G VK
Sbjct: 144 GLQIHGILRKTGLCSDLFLQNCLIGLYLKCGCLGFARQIFDRMPQRDSVSFNSMIDGYVK 203
Query: 153 WGELEFARSLFEEMP--CRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITI 210
G +E AR LF+ MP +N++SW II GY ++++ + + + A E E I+
Sbjct: 204 RGLIESARELFDLMPREVKNLISWNSIISGYA---QTSDGVDIASNLFA-EMPEKDLISW 259
Query: 211 LAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDIS 270
+++ ++G ++ + + +R D+ +ID YAK G + A LF+ +
Sbjct: 260 NSMIDGYVKHGRIEDAKDLFDAMPRR-----DVVTWATMIDGYAKLGFVHQAKTLFDQMP 314
Query: 271 VERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVG-LKPNRVTFLSVLNACSHGGLVEE 329
+++VS+ S+++G+ + EA+E F M+K L P+ T + VL+A + G + +
Sbjct: 315 --HRDVVSYNSMMAGYVQNKYHMEALEIFSDMEKESHLSPDETTLVIVLSAIAQLGRLSK 372
Query: 330 GLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGA 389
++ +VE+ L K LIDM + G ++ A GI ++ D W ++G
Sbjct: 373 AMDMHLYIVEKQFFLGG-KLGVALIDMYSKCGSIQHAMLVFEGIENKSID--HWNAMIGG 429
Query: 390 CSFHGNVEMGERVTRKILEMER 411
+ HG +GE +L++ER
Sbjct: 430 LAIHG---LGESAFDMLLQIER 448
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 58/289 (20%), Positives = 115/289 (39%), Gaps = 43/289 (14%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+N+++ Y + +A ++ +++ S L P D T ++ A L +
Sbjct: 321 YNSMMAGYVQNKYHMEALEIFSDMEK-----ESHLSP--DETTLVIVLSAIAQLGRLSKA 373
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
+H I + F + AL++MY G ++ + +F+ + +++ WN MI GL
Sbjct: 374 MDMHLYIVEKQFFLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAIH 433
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
G E A + ++ R++ +P +IT + V
Sbjct: 434 GLGESAFDMLLQIERRSI--------------------------------KPDDITFVGV 461
Query: 214 LPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVER 273
L A +G VK L ++ ++ C++D ++ G I A L +++ +E
Sbjct: 462 LNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDILSRSGSIELAKNLIQEMPIE- 520
Query: 274 KNLVSWTSIISGFAMHGMGKEAVENFGR--MQKVGLKPNRVTFLSVLNA 320
N V W + ++ H E E G+ + + G P+ LS + A
Sbjct: 521 PNDVIWRTFLTA-CNHHKEFETGELVGKHLILQAGYNPSSYVLLSNMYA 568
>gi|347954496|gb|AEP33748.1| chloroplast biogenesis 19, partial [Capsella bursa-pastoris]
Length = 489
Score = 252 bits (643), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 142/384 (36%), Positives = 223/384 (58%), Gaps = 9/384 (2%)
Query: 75 FTYSFLIRTCATLSHPN--LGTQLHAVISKVGF-QSHVYVNTALVNMYVSLGFLKDSSKL 131
T+ L+ C S + LG LH K+G ++HV V TA++ MY +K + +
Sbjct: 61 ITFIALLSGCGDFSSGSEALGDLLHGYACKLGHDRTHVMVGTAILGMYSKHSRVKKARLV 120
Query: 132 FDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEAL 191
FD M ++N VTWN MI G ++ G+++ A +F++MP R+++SWT +I+G+ + EAL
Sbjct: 121 FDYMEDKNSVTWNTMIDGYMRNGQVDNAVKMFDKMPERDLISWTAMINGFVKKGFHEEAL 180
Query: 192 ALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLID 251
A FR+M +P + I+A L A G + +H Y + F +++V N LID
Sbjct: 181 AWFREM-QISGVKPDYVAIIAALNACTNLGALSFGLWVHRYVMSQDFKN-NVKVSNSLID 238
Query: 252 TYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNR 311
Y +CGC+ A ++F+ + E++ +VSW S+I GFA +G E++ F +MQ+ G KP+
Sbjct: 239 LYCRCGCVEFAREVFDKM--EKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEEGFKPDA 296
Query: 312 VTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTAL 371
VTF L ACSH GLVEEGL +F M + + P I+HYGCL+D+ RAGRLE+A K
Sbjct: 297 VTFTGALTACSHVGLVEEGLRYFQTMKRDHRISPRIEHYGCLVDLYSRAGRLEEALKVVQ 356
Query: 372 GIPSEITDVVVWRTLLGACSFHG-NVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRF 430
+P + +VV+ +LL AC HG N + ER+ + + ++ +YV++ N+ A G++
Sbjct: 357 SMPMKPNEVVI-GSLLAACRTHGNNTVLAERLMKHLSDVNVKGHSNYVILSNMYAADGKW 415
Query: 431 GDAERLRRVMDERNAFKVPGCSLV 454
A ++RR M K PG S +
Sbjct: 416 EGASQMRRKMKGLGLKKQPGFSSI 439
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 128/297 (43%), Gaps = 41/297 (13%)
Query: 171 VVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAI--WQNGDVKSCQL 228
+VSWT I TR R EA F M EP+ IT +A+L + +G L
Sbjct: 25 IVSWTSRITLLTRNGRLAEAAKEFSDM-RLAGVEPNHITFIALLSGCGDFSSGSEALGDL 83
Query: 229 IHGYGEKRGFTAFDIRV-------------------------------LNCLIDTYAKCG 257
+HGY K G + V N +ID Y + G
Sbjct: 84 LHGYACKLGHDRTHVMVGTAILGMYSKHSRVKKARLVFDYMEDKNSVTWNTMIDGYMRNG 143
Query: 258 CIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSV 317
+ +A K+F+ + ++L+SWT++I+GF G +EA+ F MQ G+KP+ V ++
Sbjct: 144 QVDNAVKMFDKMP--ERDLISWTAMINGFVKKGFHEEALAWFREMQISGVKPDYVAIIAA 201
Query: 318 LNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEI 377
LNAC++ G + GL + + V + ++K LID+ R G +E A + + E
Sbjct: 202 LNACTNLGALSFGL-WVHRYVMSQDFKNNVKVSNSLIDLYCRCGCVEFAREVFDKM--EK 258
Query: 378 TDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAE 434
VV W +++ + +GN RK+ E G+ D V L G E
Sbjct: 259 RTVVSWNSVIVGFAANGNAHESLVYFRKM--QEEGFKPDAVTFTGALTACSHVGLVE 313
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 65/140 (46%), Gaps = 6/140 (4%)
Query: 274 KNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNF 333
+ +VSWTS I+ +G EA + F M+ G++PN +TF+++L+ C G G
Sbjct: 23 ETIVSWTSRITLLTRNGRLAEAAKEFSDMRLAGVEPNHITFIALLSGC---GDFSSGSEA 79
Query: 334 FDKMVE--ECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIP-SEITDVVVWRTLLGAC 390
++ C++ D H +LG + + +K L E + V W T++
Sbjct: 80 LGDLLHGYACKLGHDRTHVMVGTAILGMYSKHSRVKKARLVFDYMEDKNSVTWNTMIDGY 139
Query: 391 SFHGNVEMGERVTRKILEME 410
+G V+ ++ K+ E +
Sbjct: 140 MRNGQVDNAVKMFDKMPERD 159
>gi|226529055|ref|NP_001142025.1| uncharacterized protein LOC100274179 [Zea mays]
gi|194706828|gb|ACF87498.1| unknown [Zea mays]
Length = 570
Score = 252 bits (643), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 145/421 (34%), Positives = 244/421 (57%), Gaps = 14/421 (3%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+N+++ Y+ A ++A L+ ++++ L D FT + L+ C+ + G
Sbjct: 114 WNSMIGGYAQAGDTREACALFGEMRR--------QGFLGDEFTLASLLLACSQEGNLEFG 165
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
+H ++ G + + ALV+MY G L + + F+ MP +++V+W M+ K
Sbjct: 166 RLVHCLMLVSGSPVDLILGGALVDMYSKCGDLCMARRCFEMMPIKSVVSWTSMLCAQTKH 225
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
G ++ AR F+ MP RN VSW +I Y + + +EAL L+++M + P E T++ V
Sbjct: 226 GSVDAARCWFDHMPERNTVSWNTMISCYVQRGQYHEALDLYKQMQS-HGPAPDEATLVPV 284
Query: 214 LPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVER 273
L A + GD+ +++H Y + DI ++N L+D YAKCG + +A +LF ++
Sbjct: 285 LSACGRIGDLTVGKMVHLY-IRDNIHNPDISLINSLLDMYAKCGQVDTAIRLFREMC--N 341
Query: 274 KNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNF 333
+N+VSW II G AMHG +A+ F M + P+ +TF+++L++CSHGGL+E G ++
Sbjct: 342 RNVVSWNVIIGGLAMHGRALDAITFFRSMVR-NTSPDGITFVALLSSCSHGGLLETGQHY 400
Query: 334 FDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFH 393
F+ M V +++HY C++D+LGR G LE+A +P + DVVVW LLGAC H
Sbjct: 401 FESMRHVYNVKHEVEHYACMVDLLGRRGHLEKAVCLIKEMPMK-PDVVVWGALLGACRIH 459
Query: 394 GNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSL 453
GNV++G++V +++LE+E GG +VL+ N+L ++ D +RLR++M ER K G S
Sbjct: 460 GNVKIGKQVIKQLLELEGISGGLFVLISNLLYETNQWEDMKRLRKLMKERGTRKDMGVSS 519
Query: 454 V 454
+
Sbjct: 520 I 520
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 101/393 (25%), Positives = 172/393 (43%), Gaps = 77/393 (19%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNL 92
++NT+ Y ++ P++A L++ + + LP + FT F+++ C +
Sbjct: 12 MYNTITRAYCNSDCPREALRLHRCMLR-----RGVLP---NEFTLPFVVKACTRAQAWDN 63
Query: 93 GTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVK 152
+H V K+GF V+V AL++ Y S G L DS + FD
Sbjct: 64 ALAVHGVALKLGFVGQVFVANALLHSYASAGSLGDSRRFFD------------------- 104
Query: 153 WGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILA 212
EM RNVVSW +I GY + + EA ALF +M + E T+ +
Sbjct: 105 ------------EMAGRNVVSWNSMIGGYAQAGDTREACALFGEMRRQGFL-GDEFTLAS 151
Query: 213 VLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVE 272
+L A Q G+++ +L+H G + D+ + L+D Y+KCG + A + FE + ++
Sbjct: 152 LLLACSQEGNLEFGRLVHCLMLVSG-SPVDLILGGALVDMYSKCGDLCMARRCFEMMPIK 210
Query: 273 -----------------------------RKNLVSWTSIISGFAMHGMGKEAVENFGRMQ 303
+N VSW ++IS + G EA++ + +MQ
Sbjct: 211 SVVSWTSMLCAQTKHGSVDAARCWFDHMPERNTVSWNTMISCYVQRGQYHEALDLYKQMQ 270
Query: 304 KVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRL 363
G P+ T + VL+AC G + G + + PDI L+DM + G++
Sbjct: 271 SHGPAPDEATLVPVLSACGRIGDLTVG-KMVHLYIRDNIHNPDISLINSLLDMYAKCGQV 329
Query: 364 EQAEKTALGIPSEIT--DVVVWRTLLGACSFHG 394
+ TA+ + E+ +VV W ++G + HG
Sbjct: 330 D----TAIRLFREMCNRNVVSWNVIIGGLAMHG 358
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/241 (29%), Positives = 118/241 (48%), Gaps = 17/241 (7%)
Query: 162 LFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNG 221
+F+ + + V + I Y + EAL L R M+ P+E T+ V+ A +
Sbjct: 1 MFDGILDPDRVMYNTITRAYCNSDCPREALRLHRCMLR-RGVLPNEFTLPFVVKACTRAQ 59
Query: 222 DVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTS 281
+ +HG K GF + V N L+ +YA G + + + F++++ +N+VSW S
Sbjct: 60 AWDNALAVHGVALKLGFVG-QVFVANALLHSYASAGSLGDSRRFFDEMA--GRNVVSWNS 116
Query: 282 IISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEEC 341
+I G+A G +EA FG M++ G + T S+L ACS G +E F ++V C
Sbjct: 117 MIGGYAQAGDTREACALFGEMRRQGFLGDEFTLASLLLACSQEGNLE-----FGRLV-HC 170
Query: 342 EVL-----PDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNV 396
+L D+ G L+DM + G L A + +P I VV W ++L A + HG+V
Sbjct: 171 LMLVSGSPVDLILGGALVDMYSKCGDLCMARRCFEMMP--IKSVVSWTSMLCAQTKHGSV 228
Query: 397 E 397
+
Sbjct: 229 D 229
>gi|2583119|gb|AAB82628.1| hypothetical protein [Arabidopsis thaliana]
Length = 606
Score = 252 bits (643), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 135/344 (39%), Positives = 210/344 (61%), Gaps = 8/344 (2%)
Query: 113 TALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVV 172
++++ YV G ++D+ LFD MP R++VTW MI G K G + A++LF++MP R+VV
Sbjct: 249 NSMIDGYVKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDVV 308
Query: 173 SWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGY 232
++ ++ GY + EAL +F M + P + T++ VLPAI Q G + +H Y
Sbjct: 309 AYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLY 368
Query: 233 -GEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGM 291
EK+ + + V LID Y+KCG I A +FE I E K++ W ++I G A+HG+
Sbjct: 369 IVEKQFYLGGKLGV--ALIDMYSKCGSIQHAMLVFEGI--ENKSIDHWNAMIGGLAIHGL 424
Query: 292 GKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYG 351
G+ A + +++++ LKP+ +TF+ VLNACSH GLV+EGL F+ M + ++ P ++HYG
Sbjct: 425 GESAFDMLLQIERLSLKPDDITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYG 484
Query: 352 CLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMER 411
C++D+L R+G +E A+ +P E D V+WRT L ACS H E GE V + ++ ++
Sbjct: 485 CMVDILSRSGSIELAKNLIEEMPVEPND-VIWRTFLTACSHHKEFETGELVAKHLI-LQA 542
Query: 412 GYG-GDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
GY YVL+ N+ A G + D R+R +M ER K+PGCS +
Sbjct: 543 GYNPSSYVLLSNMYASFGMWKDVRRVRTMMKERKIEKIPGCSWI 586
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 115/447 (25%), Positives = 212/447 (47%), Gaps = 54/447 (12%)
Query: 1 MHILQNSQTPNNITTQIHSHLLTTNSLLHHSQLFNTLLHFYS-----LAESPQKAFLLYK 55
+H+L + +T +++ QIH L+ T + + + +L F S LA+ + F Y
Sbjct: 9 IHVLGSCKTSDDVN-QIHGRLIKTGIIKNSNLTTRIVLAFASSRRPYLADFARCVFHEYH 67
Query: 56 QLQ--------------QIYTHSHSPLPPL--------------FDSFTYSFLIRTCATL 87
I +HSH P D F+ S +++ C+ L
Sbjct: 68 VCSFSFGEVEDPFLWNAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSLSLVLKACSRL 127
Query: 88 SHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMI 147
G Q+H + K G S +++ L+ +Y+ G L S ++FD MP+R+ V++N MI
Sbjct: 128 GFVKGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMI 187
Query: 148 TGLVKWGELEFARSLFEEMP--CRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEP 205
G VK G + AR LF+ MP +N++SW +I GY ++++ + + K+ A + E
Sbjct: 188 DGYVKCGLIVSARELFDLMPMEMKNLISWNSMISGYA---QTSDGVDIASKLFA-DMPEK 243
Query: 206 SEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKL 265
I+ +++ ++G ++ + + +R D+ +ID YAK G + A L
Sbjct: 244 DLISWNSMIDGYVKHGRIEDAKGLFDVMPRR-----DVVTWATMIDGYAKLGFVHHAKTL 298
Query: 266 FEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVG-LKPNRVTFLSVLNACSHG 324
F+ + +++V++ S+++G+ + EA+E F M+K L P+ T + VL A +
Sbjct: 299 FDQMP--HRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQL 356
Query: 325 GLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWR 384
G + + ++ +VE+ L K LIDM + G ++ A GI ++ D W
Sbjct: 357 GRLSKAIDMHLYIVEKQFYLGG-KLGVALIDMYSKCGSIQHAMLVFEGIENKSID--HWN 413
Query: 385 TLLGACSFHGNVEMGERVTRKILEMER 411
++G + HG +GE +L++ER
Sbjct: 414 AMIGGLAIHG---LGESAFDMLLQIER 437
>gi|147856457|emb|CAN80769.1| hypothetical protein VITISV_013866 [Vitis vinifera]
Length = 761
Score = 252 bits (643), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 140/387 (36%), Positives = 222/387 (57%), Gaps = 18/387 (4%)
Query: 73 DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLF 132
D T+ +I C++ P L L + + Q + +V TAL++MY G + + ++F
Sbjct: 259 DETTWVTVISACSSRGDPCLAASLVRTLHQKQIQLNCFVRTALLDMYAKCGSIGAARRIF 318
Query: 133 DEM-PERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEAL 191
DE+ RN VTWN MI+ + G L+ AR LF MP RNVV+W +I GY + +S A+
Sbjct: 319 DELGAYRNSVTWNAMISAYTRVGNLDSARELFNTMPGRNVVTWNSMIAGYAQNGQSAMAI 378
Query: 192 ALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVL----N 247
LF++M+ + P E+T+++V+ A G + + +L G R T I++ N
Sbjct: 379 ELFKEMITAKKLTPDEVTMVSVISAC---GHLGALEL--GNWVVRFLTENQIKLSISGHN 433
Query: 248 CLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGL 307
+I Y++CG + A ++F++++ +++VS+ ++ISGFA HG G EA+ M++ G+
Sbjct: 434 AMIFMYSRCGSMEDAKRVFQEMAT--RDVVSYNTLISGFAAHGHGVEAINLMSTMKEGGI 491
Query: 308 KPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAE 367
+P+RVTF+ VL ACSH GL+EEG F+ + + P I HY C++D+LGR G LE A+
Sbjct: 492 EPDRVTFIGVLTACSHAGLLEEGRKVFESIKD-----PAIDHYACMVDLLGRVGELEDAK 546
Query: 368 KTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGV 427
+T +P E V+ +LL A H VE+GE K+ E+E G+++L+ NI A
Sbjct: 547 RTMERMPME-PHAGVYGSLLNASRIHKQVELGELAANKLFELEPDNSGNFILLSNIYASA 605
Query: 428 GRFGDAERLRRVMDERNAFKVPGCSLV 454
GR+ D ER+R M + K G S V
Sbjct: 606 GRWKDVERIREAMKKGGVKKTTGWSWV 632
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 137/489 (28%), Positives = 220/489 (44%), Gaps = 86/489 (17%)
Query: 18 HSHLLTTNSLLHHSQLFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTY 77
++HLL ++L + +F ++L FYS + K L+++ +Q D+F Y
Sbjct: 52 YTHLLFNSTLNPNVFVFTSMLRFYSHLQDHAKVVLMFEHMQGCGVRP--------DAFVY 103
Query: 78 SFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDE--- 134
LI++ N G HA + K+G S +V A+++MY LG + + K+FDE
Sbjct: 104 PILIKSAG-----NGGIGFHAHVLKLGHGSDAFVRNAVIDMYARLGPIGHARKVFDEIPD 158
Query: 135 ------------------------------MPERNLVTWNVMITGLVKWGELEFARSLFE 164
MPERN++TW M+TG K +LE AR F+
Sbjct: 159 YERKVADWNAMVSGYWKWESEGQAQWLFDVMPERNVITWTAMVTGYAKVKDLEAARRYFD 218
Query: 165 EMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGD-V 223
MP R+VVSW ++ GY + + E L LF +MV EP E T + V+ A GD
Sbjct: 219 CMPERSVVSWNAMLSGYAQNGLAEEVLRLFDEMVNAG-IEPDETTWVTVISACSSRGDPC 277
Query: 224 KSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVER---------- 273
+ L+ +K+ + V L+D YAKCG I +A ++F+++ R
Sbjct: 278 LAASLVRTLHQKQ--IQLNCFVRTALLDMYAKCGSIGAARRIFDELGAYRNSVTWNAMIS 335
Query: 274 --------------------KNLVSWTSIISGFAMHGMGKEAVENFGRM-QKVGLKPNRV 312
+N+V+W S+I+G+A +G A+E F M L P+ V
Sbjct: 336 AYTRVGNLDSARELFNTMPGRNVVTWNSMIAGYAQNGQSAMAIELFKEMITAKKLTPDEV 395
Query: 313 TFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALG 372
T +SV++AC H G +E G N+ + + E ++ I + +I M R G +E A++
Sbjct: 396 TMVSVISACGHLGALELG-NWVVRFLTENQIKLSISGHNAMIFMYSRCGSMEDAKRVFQE 454
Query: 373 IPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGD 432
+ + DVV + TL+ + HG+ E + E G D V +L G
Sbjct: 455 MATR--DVVSYNTLISGFAAHGHGV--EAINLMSTMKEGGIEPDRVTFIGVLTACSHAGL 510
Query: 433 AERLRRVMD 441
E R+V +
Sbjct: 511 LEEGRKVFE 519
>gi|90265157|emb|CAH67783.1| H0201G08.10 [Oryza sativa Indica Group]
Length = 530
Score = 252 bits (643), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 135/366 (36%), Positives = 208/366 (56%), Gaps = 5/366 (1%)
Query: 91 NLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGL 150
N G +HA++ G V+V+T L+ +Y G L S ++FD+MP R+ +TWN M+
Sbjct: 132 NPGKMIHALVVTSGIVPDVFVSTELIRVYGESGELPVSRRVFDDMPSRSTITWNAMLHQY 191
Query: 151 VKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACE--YTEPSEI 208
+ G+++ A +F MP R+VVSW ++ GY R EAL LFR+MV+ P+
Sbjct: 192 ARHGKVDTAYEMFLAMPRRDVVSWNTVLAGYCVAGRCREALGLFRQMVSPSSCAVHPNVP 251
Query: 209 TILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFED 268
T+ +L A G +++ +H Y E+ D + CLID Y KCG I +A ++FE
Sbjct: 252 TMSTILGACAGAGCLETGIWVHAYIERNRMND-DGYLDRCLIDMYCKCGSIDNALQVFEK 310
Query: 269 ISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVE 328
+ +K+L SWT++I G AMHG +A+ F MQ G+ P+ VT + VLNAC+HGGLV+
Sbjct: 311 -APRKKDLFSWTTVICGLAMHGRTTDALRMFDMMQDNGICPDDVTLVGVLNACAHGGLVD 369
Query: 329 EGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLG 388
EGL +F M + + P I+HYGC+ID+LGR GRL++A +P + + V+W L
Sbjct: 370 EGLGYFYSMEAKFRITPKIEHYGCMIDLLGRVGRLQEAYSMIRTMPMD-PNTVIWGAFLS 428
Query: 389 ACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKV 448
AC HGN+E+G+ ++ ++ V++ ++ A + R RR M+ K
Sbjct: 429 ACKVHGNMELGKIAAEELTRLDPDDPWGRVMLSSMYAKAQDWIGLARERREMNSMQVKKT 488
Query: 449 PGCSLV 454
PGCS +
Sbjct: 489 PGCSSI 494
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 94/345 (27%), Positives = 161/345 (46%), Gaps = 36/345 (10%)
Query: 70 PLFDSFTYSFLIRTCATLSHPN--LGTQLHAVISKVGF-QSHVYVNTALVNMYVSLGFLK 126
PL S T LI++ + H + +H ++ K G ++ TAL++ Y +LG
Sbjct: 3 PLTLSSTALRLIKSLSPAVHGAHLSASSIHCLLLKAGLLHVGAHLPTALLSAYAALGSPD 62
Query: 127 DSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNR 186
+ +LFDEMPE+ LV M V G+ A ++F +M + DG N
Sbjct: 63 HARRLFDEMPEQGLVPRTAMARAHVASGQAAQAIAVFGDM----------VADGVFPDNV 112
Query: 187 SNEALALFRKMVACEYT---EPSE-ITILAVLPAIWQNGDVKSCQLIHGYGE-------K 235
+ A+AL A +T P + I L V I + V S +LI YGE +
Sbjct: 113 A-VAVALGACHGAGSWTARRNPGKMIHALVVTSGIVPDVFV-STELIRVYGESGELPVSR 170
Query: 236 RGFTAFDIR---VLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMG 292
R F R N ++ YA+ G + +A ++F +++ R+++VSW ++++G+ + G
Sbjct: 171 RVFDDMPSRSTITWNAMLHQYARHGKVDTAYEMF--LAMPRRDVVSWNTVLAGYCVAGRC 228
Query: 293 KEAVENFGRM---QKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKH 349
+EA+ F +M + PN T ++L AC+ G +E G+ + +E + D
Sbjct: 229 REALGLFRQMVSPSSCAVHPNVPTMSTILGACAGAGCLETGI-WVHAYIERNRMNDDGYL 287
Query: 350 YGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHG 394
CLIDM + G ++ A + P + D+ W T++ + HG
Sbjct: 288 DRCLIDMYCKCGSIDNALQVFEKAPRK-KDLFSWTTVICGLAMHG 331
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/278 (22%), Positives = 112/278 (40%), Gaps = 50/278 (17%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+NT+L Y +A ++A L++Q+ + + P P T S ++ CA G
Sbjct: 215 WNTVLAGYCVAGRCREALGLFRQMVSPSSCAVHPNVP-----TMSTILGACAGAGCLETG 269
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMP-ERNLVTWNVMITGLVK 152
+HA I + Y++ L++MY G + ++ ++F++ P +++L +W +I GL
Sbjct: 270 IWVHAYIERNRMNDDGYLDRCLIDMYCKCGSIDNALQVFEKAPRKKDLFSWTTVICGLAM 329
Query: 153 WGELEFARSLFEEMP----CRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEI 208
G A +F+ M C + V+ G+++ +E L F M A P
Sbjct: 330 HGRTTDALRMFDMMQDNGICPDDVTLVGVLNACAHGGLVDEGLGYFYSMEAKFRITPK-- 387
Query: 209 TILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFED 268
I YG C+ID + G + A +
Sbjct: 388 --------------------IEHYG--------------CMIDLLGRVGRLQEAYSMIRT 413
Query: 269 ISVERKNLVSWTSIISGFAMHG---MGKEAVENFGRMQ 303
+ ++ N V W + +S +HG +GK A E R+
Sbjct: 414 MPMD-PNTVIWGAFLSACKVHGNMELGKIAAEELTRLD 450
>gi|359481504|ref|XP_002274656.2| PREDICTED: pentatricopeptide repeat-containing protein At5g42450,
mitochondrial-like [Vitis vinifera]
Length = 538
Score = 252 bits (643), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 137/382 (35%), Positives = 220/382 (57%), Gaps = 5/382 (1%)
Query: 73 DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLF 132
+ F++ +I + L N G QLHA K+G +S+V+V +A+V+ Y L + ++ K F
Sbjct: 110 NQFSFGTVIPSSTALQDLNSGRQLHACAIKMGLESNVFVGSAVVDFYAKLTSINEAQKAF 169
Query: 133 DEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALA 192
++ E N+V++ +I G +K + A +LF +MP RNVVSW +I GY++M + EA+
Sbjct: 170 EDTHEPNVVSYTTLIRGYLKKERFDDALALFRKMPERNVVSWNAMISGYSQMGYNEEAVN 229
Query: 193 LFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDT 252
LF M+ E T P+E T + A+ + + HG K FD+ + N L+
Sbjct: 230 LFVVMLR-EGTLPNERTFPCAISAVANIAALGMGRSFHGSAVKF-LGKFDVFIGNSLVSF 287
Query: 253 YAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRV 312
YAKCG + + +F ++ +KN+VSW ++I G+A HG G EA+ F +MQ GL+PN V
Sbjct: 288 YAKCGSMEESLLVFN--TLPKKNIVSWNALICGYANHGRGMEAIYFFEKMQDTGLRPNSV 345
Query: 313 TFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALG 372
T L +L AC+H GLV++G ++F+K E L +H+ C++D+L R+GR ++AEK
Sbjct: 346 TLLGLLLACNHSGLVDKGYSYFNKARVEEPGLLTPEHHACMVDLLSRSGRFKEAEKFLHE 405
Query: 373 IPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGD 432
+P + + W+ LLG C H N+E+GE RKIL ++ YV++ N + GR+
Sbjct: 406 LPF-VPGIGFWKALLGGCRIHSNMELGELAARKILALDPEDVSSYVMLSNAHSAAGRWQS 464
Query: 433 AERLRRVMDERNAFKVPGCSLV 454
+R+ M E+ VPG S +
Sbjct: 465 VSMIRKEMREKRMKGVPGSSWI 486
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 120/265 (45%), Gaps = 34/265 (12%)
Query: 159 ARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIW 218
A LF+E+P +VVS T I + R + EA+ F +M+A +P++ + V+P+
Sbjct: 64 ACKLFDEVPNWDVVSATATIGCFARYHHHEEAIYFFSRMLALN-IKPNQFSFGTVIPSST 122
Query: 219 QNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFED---------- 268
D+ S + +H K G + ++ V + ++D YAK I A K FED
Sbjct: 123 ALQDLNSGRQLHACAIKMGLES-NVFVGSAVVDFYAKLTSINEAQKAFEDTHEPNVVSYT 181
Query: 269 ------ISVER-------------KNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKP 309
+ ER +N+VSW ++ISG++ G +EAV F M + G P
Sbjct: 182 TLIRGYLKKERFDDALALFRKMPERNVVSWNAMISGYSQMGYNEEAVNLFVVMLREGTLP 241
Query: 310 NRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKT 369
N TF ++A ++ + G +F V+ D+ L+ + G +E++
Sbjct: 242 NERTFPCAISAVANIAALGMGRSFHGSAVKFLGKF-DVFIGNSLVSFYAKCGSMEESLLV 300
Query: 370 ALGIPSEITDVVVWRTLLGACSFHG 394
+P + ++V W L+ + HG
Sbjct: 301 FNTLPKK--NIVSWNALICGYANHG 323
Score = 45.8 bits (107), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 52/96 (54%), Gaps = 6/96 (6%)
Query: 223 VKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSI 282
+K Q IHG K G T + + + +Y+ ++ A KLF++ V ++VS T+
Sbjct: 29 LKESQRIHGRAIKLGTTILEPDI----VCSYSASKALWDACKLFDE--VPNWDVVSATAT 82
Query: 283 ISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVL 318
I FA + +EA+ F RM + +KPN+ +F +V+
Sbjct: 83 IGCFARYHHHEEAIYFFSRMLALNIKPNQFSFGTVI 118
>gi|297848882|ref|XP_002892322.1| hypothetical protein ARALYDRAFT_311694 [Arabidopsis lyrata subsp.
lyrata]
gi|297338164|gb|EFH68581.1| hypothetical protein ARALYDRAFT_311694 [Arabidopsis lyrata subsp.
lyrata]
Length = 1329
Score = 252 bits (643), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 149/454 (32%), Positives = 239/454 (52%), Gaps = 47/454 (10%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNL 92
++N L+ + P ++ Y ++ + S SP S+TYS L++ A S
Sbjct: 845 VYNALIKGFVTCSHPIRSLEFYVRMLR---DSVSP-----SSYTYSSLVQASAFAS--GF 894
Query: 93 GTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPER-------------- 138
G L A I K GF HV + T L+ Y + G ++++ K+FDEMPER
Sbjct: 895 GESLQAHIWKFGFGFHVQIQTTLIGFYSASGRIREARKVFDEMPERDDVTWTTMVSAYRQ 954
Query: 139 -----------------NLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGY 181
N TWN +I G + G LE A SLF +MP ++++SWT +I+GY
Sbjct: 955 VLDMDSANSLANQMPEKNEATWNCLIDGYTRLGNLELAESLFNQMPVKDIISWTTMINGY 1014
Query: 182 TRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAF 241
+R R EA+A+F KM+ E P E+T+ V+ A G ++ + +H Y + GF
Sbjct: 1015 SRNKRYREAIAVFYKMME-EGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTVQNGFV-L 1072
Query: 242 DIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGR 301
D+ + + L+D Y+KCG + A +F ++ +KNL W SII G A HG +EA++ F +
Sbjct: 1073 DVYIGSALVDMYSKCGSLERALLVF--FNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAK 1130
Query: 302 MQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAG 361
M+ +KPN VTF+SV AC+H GLVEEG + M+++ ++ +++HYGC++ + +AG
Sbjct: 1131 MEMESVKPNTVTFVSVFTACTHAGLVEEGRRIYRSMIDDYSIVSNVEHYGCMVHLFSKAG 1190
Query: 362 RLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMY 421
+ +A + + E + V+W LL C H N+E+ E K++ +E G Y L+
Sbjct: 1191 LIYEALELIGSMEFE-PNAVIWGALLDGCRIHKNLEIAEIAFNKLMILEPMNSGYYFLLV 1249
Query: 422 NILAGVGRFGDAERLRRVMDERNAFKV-PGCSLV 454
++ A R+ D +R M E K+ PG S +
Sbjct: 1250 SMYAEQNRWRDVAEIRGRMRELGIEKICPGTSSI 1283
>gi|356524477|ref|XP_003530855.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g06145-like [Glycine max]
Length = 529
Score = 251 bits (642), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 140/413 (33%), Positives = 216/413 (52%), Gaps = 37/413 (8%)
Query: 74 SFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGF--------- 124
S+++S LI+ C L G +H + K GF SHV+V T L+ Y + G
Sbjct: 76 SYSFSSLIKACTLLVDSAFGEAVHGHVWKHGFDSHVFVQTTLIEFYSTFGDVGGSRRVFD 135
Query: 125 ----------------------LKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSL 162
+ + +LFDEMPE+N+ TWN MI G K G E A L
Sbjct: 136 DMPERDVFAWTTMISAHVRDGDMASAGRLFDEMPEKNVATWNAMIDGYGKLGNAESAEFL 195
Query: 163 FEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGD 222
F +MP R+++SWT +++ Y+R R E +ALF ++ + P E+T+ V+ A G
Sbjct: 196 FNQMPARDIISWTTMMNCYSRNKRYKEVIALFHDVID-KGMIPDEVTMTTVISACAHLGA 254
Query: 223 VKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSI 282
+ + +H Y +GF D+ + + LID YAKCG I A +F ++ KNL W I
Sbjct: 255 LALGKEVHLYLVLQGFD-LDVYIGSSLIDMYAKCGSIDMALLVF--YKLQTKNLFCWNCI 311
Query: 283 ISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECE 342
I G A HG +EA+ FG M++ ++PN VTF+S+L AC+H G +EEG +F MV++
Sbjct: 312 IDGLATHGYVEEALRMFGEMERKRIRPNAVTFISILTACTHAGFIEEGRRWFMSMVQDYC 371
Query: 343 VLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERV 402
+ P ++HYGC++D+L +AG LE A + + E + +W LL C H N+E+
Sbjct: 372 IAPQVEHYGCMVDLLSKAGLLEDALEMIRNMTVE-PNSFIWGALLNGCKLHKNLEIAHIA 430
Query: 403 TRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFK-VPGCSLV 454
+ ++ +E G Y L+ N+ A R+ + ++R M + K PG S V
Sbjct: 431 VQNLMVLEPSNSGHYSLLVNMYAEENRWNEVAKIRTTMKDLGVEKRCPGSSWV 483
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 95/217 (43%), Gaps = 33/217 (15%)
Query: 73 DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLF 132
D T + +I CA L LG ++H + GF VY+ ++L++MY G + + +F
Sbjct: 238 DEVTMTTVISACAHLGALALGKEVHLYLVLQGFDLDVYIGSSLIDMYAKCGSIDMALLVF 297
Query: 133 DEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALA 192
++ +NL WN +I GL G +E A +F EM
Sbjct: 298 YKLQTKNLFCWNCIIDGLATHGYVEEALRMFGEME------------------------- 332
Query: 193 LFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDT 252
RK + P+ +T +++L A G ++ + + A + C++D
Sbjct: 333 --RKRI-----RPNAVTFISILTACTHAGFIEEGRRWFMSMVQDYCIAPQVEHYGCMVDL 385
Query: 253 YAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMH 289
+K G + A ++ +++VE + + W ++++G +H
Sbjct: 386 LSKAGLLEDALEMIRNMTVEPNSFI-WGALLNGCKLH 421
>gi|224094065|ref|XP_002310070.1| predicted protein [Populus trichocarpa]
gi|222852973|gb|EEE90520.1| predicted protein [Populus trichocarpa]
Length = 438
Score = 251 bits (642), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 131/382 (34%), Positives = 224/382 (58%), Gaps = 4/382 (1%)
Query: 73 DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLF 132
D TY FL + + L LG +H + K GF+ +V +L++MY S G + + K+F
Sbjct: 9 DHLTYPFLAKATSRLLRKELGVSIHGHVIKSGFEIDRFVANSLIHMYGSCGDIVYARKVF 68
Query: 133 DEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALA 192
D P +NLV+WN M+ G K G L+ AR LF+ MP R+V SW+ +IDGY + +A+A
Sbjct: 69 DGTPVKNLVSWNSMVDGYAKCGYLDLARGLFDLMPERDVRSWSCLIDGYAKSGNYGDAMA 128
Query: 193 LFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDT 252
+F KM + +E+T+++VL A G + +++H Y GF ++ + LID
Sbjct: 129 VFEKMRTSG-PKANEVTMVSVLCACAHLGALDKGRMMHQYLVDNGFE-LNLVLRTSLIDM 186
Query: 253 YAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRV 312
YAKCG + A +F +S+ + +++ W ++I G A HG+ KE+++ + MQ G+KP+ +
Sbjct: 187 YAKCGAVEEAFAVFRGVSLRKSDVLIWNAMIGGLATHGLVKESLDLYTEMQIAGIKPDEI 246
Query: 313 TFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALG 372
TFL +L+AC+HGGLV++ F+ + + + P +HY C++D++ RAG++ +A +
Sbjct: 247 TFLCLLSACAHGGLVKQASYVFEGLGKN-GMTPKTEHYACMVDVMARAGQVAEAYQFLCQ 305
Query: 373 IPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGD 432
+P E T ++ LL C HG +++ E + +K++E++ + G YV + N+ A R+ +
Sbjct: 306 MPLEPTASMLG-ALLSGCMNHGKLDLAELIGKKLIELDPEHDGRYVGLSNVYAIGRRWDE 364
Query: 433 AERLRRVMDERNAFKVPGCSLV 454
A +R M+ R K PG S +
Sbjct: 365 ARIMREAMERRGVKKTPGYSFL 386
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 95/237 (40%), Gaps = 43/237 (18%)
Query: 70 PLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSS 129
P + T ++ CA L + G +H + GF+ ++ + T+L++MY G ++++
Sbjct: 138 PKANEVTMVSVLCACAHLGALDKGRMMHQYLVDNGFELNLVLRTSLIDMYAKCGAVEEAF 197
Query: 130 KLFDEMPER--NLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRS 187
+F + R +++ WN MI GL G ++ + L+ EM +
Sbjct: 198 AVFRGVSLRKSDVLIWNAMIGGLATHGLVKESLDLYTEMQIAGI---------------- 241
Query: 188 NEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLN 247
+P EIT L +L A G VK + K G T
Sbjct: 242 ----------------KPDEITFLCLLSACAHGGLVKQASYVFEGLGKNGMTP-KTEHYA 284
Query: 248 CLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHG-------MGKEAVE 297
C++D A+ G + A + + +E +++SG HG +GK+ +E
Sbjct: 285 CMVDVMARAGQVAEAYQFLCQMPLE-PTASMLGALLSGCMNHGKLDLAELIGKKLIE 340
>gi|225451344|ref|XP_002274803.1| PREDICTED: pentatricopeptide repeat-containing protein At3g18970
[Vitis vinifera]
gi|298204853|emb|CBI34160.3| unnamed protein product [Vitis vinifera]
Length = 471
Score = 251 bits (642), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 170/480 (35%), Positives = 249/480 (51%), Gaps = 69/480 (14%)
Query: 10 PNNI--TTQIHSHLLTTNSLLHHSQLFNTLLHFYSLAESPQKAFLLYKQLQQ----IYTH 63
PN+I Q+H+HL+T + + L L+H Y SP A+ + L+ ++
Sbjct: 22 PNSIHHIKQLHAHLIT--NAVSSPPLLAKLIHHYCAFSSPHYAYTFFIHLRSPNLFLFNT 79
Query: 64 SHSPLPP----------------LFDSFTYSFLIRTCATLSHPNL--GTQLHAVISKVGF 105
LPP +FD FTY F + CA P+L G Q+HA I K G
Sbjct: 80 LIKCLPPSSSILVFADWVSREALVFDDFTYIFALGACA--RSPSLWEGRQIHARILKQGV 137
Query: 106 QSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEE 165
S+V V T ++ Y + + + +FDEM +R+ VTWN MITG
Sbjct: 138 WSNVLVQTTAIHFYANNNDVALARLVFDEMRKRSSVTWNAMITGY--------------- 182
Query: 166 MPCRNVVSWTGIIDGYTRMNRSNEALALFRKMV--ACEYTEPSEITILAVLPAIWQNGDV 223
S G + Y R +AL LFR M+ AC +P++ T++ VL A Q G +
Sbjct: 183 ------CSQRGKVVCYAR-----DALVLFRAMLVDACG-VKPTDTTMVCVLSAASQLGVL 230
Query: 224 KSCQLIHGYGEKRGFT-AFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSI 282
++ +HGY EK A D+ V L+D Y+KCGC+ SA +F ++ +N+++WT++
Sbjct: 231 ETGVGVHGYIEKTVLAPANDVFVGTGLVDMYSKCGCLGSALCIF--WGMKERNVLTWTAM 288
Query: 283 ISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECE 342
I+G A HG GKEA+E M G+KPN VTF S+ +AC H GLVEEGL F M +
Sbjct: 289 ITGLARHGRGKEALELLDEMVAYGVKPNAVTFTSLFSACCHAGLVEEGLQLFHSMRSKFG 348
Query: 343 VLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERV 402
V P I+HYGC++D+LGRAG L++A G+P E D ++WR+LL AC H +V MGE V
Sbjct: 349 VTPGIQHYGCIVDLLGRAGHLKEAYDFVRGMPVE-PDAILWRSLLSACKVHRDVVMGEEV 407
Query: 403 TRKILEMER--------GYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
+ +L+++ D++ + N+ A R+ D E +R M + PGCS V
Sbjct: 408 GKLLLQLQPQQSFADLVAASEDFIALSNVYASAERWEDVETVREAMKVKGIETKPGCSSV 467
>gi|357159954|ref|XP_003578611.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Brachypodium distachyon]
Length = 600
Score = 251 bits (642), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 155/483 (32%), Positives = 241/483 (49%), Gaps = 77/483 (15%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNL 92
L NTLL Y+L P++A ++ + P DSFTYSFLI+ ++ L
Sbjct: 91 LPNTLLRAYALNALPREAVAVFSAM------------PHRDSFTYSFLIKALSSAGVAPL 138
Query: 93 GTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVK 152
+H+ + K+G YV AL++ Y G D+SK+F+EMP R++V+WN + +V+
Sbjct: 139 -RAVHSHVVKLGSIEDTYVGNALIDAYSKNGGFSDASKVFEEMPRRDVVSWNSAMAAMVR 197
Query: 153 WGELEFARSLFEEM-------------------------------PCRNVVSWTGIIDGY 181
GE+E AR +F+EM P RNVVSW+ ++ GY
Sbjct: 198 QGEVEGARRMFDEMLEKDTVSWNTLLDGYTKAGDVEEAFKLFQCMPERNVVSWSTVVSGY 257
Query: 182 TRMNRSNEALALFRKM------------VACE-----------YTEPSEITI-------L 211
+ A +F KM AC +T+ E ++ +
Sbjct: 258 CKKGDMEMARVIFDKMPTKNLVTWTIMVSACAQNGLVEEAGKLFTQMKEASVELDVAAVV 317
Query: 212 AVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISV 271
++L A ++G + + IH Y R V N LID + KCGCI A +F D +
Sbjct: 318 SILAACAESGSLALGKRIHRYVRTRQL-GRSTHVCNALIDMFCKCGCINRADYVF-DTEI 375
Query: 272 ERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGL 331
K+ VSW +II GFAMHG G +A++ F +M+ G P+ VT ++VL+AC+H G VEEG
Sbjct: 376 VEKDSVSWNTIIGGFAMHGHGDKALDFFAQMKLQGFCPDAVTMINVLSACTHMGFVEEGR 435
Query: 332 NFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACS 391
+F M + V+P I+HYGC+ID+LGR G +++A +P + + V+W +LL AC
Sbjct: 436 RYFANMERDYGVVPQIEHYGCMIDLLGRGGLIKEAVDLIKSMPWDPNE-VIWGSLLSACR 494
Query: 392 FHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGC 451
H NVE E ++ +++ G+Y ++ +I A G++ D + R M + K G
Sbjct: 495 LHKNVEYAEIAVNELSKLQPSNAGNYAVLSSIYAEAGKWSDMAKARMQMKGTGSQKSSGS 554
Query: 452 SLV 454
S +
Sbjct: 555 SWI 557
>gi|449470118|ref|XP_004152765.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
Length = 797
Score = 251 bits (642), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 138/393 (35%), Positives = 220/393 (55%), Gaps = 21/393 (5%)
Query: 72 FDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSH----VYVNTALVNMYVSLGFLKD 127
FD TY+ +I CA + +G Q+HA I K + + V+ AL+ +Y + +
Sbjct: 287 FDDITYTTIISACANVGSFQMGKQMHAYILKNELNPNHSFCLSVSNALITLYCKNNKVDE 346
Query: 128 SSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRS 187
+ K+F MP RN++TWN +++G V G +E A+S FEEMP +N+++ T +I G +
Sbjct: 347 ARKIFYAMPVRNIITWNAILSGYVNAGRMEEAKSFFEEMPVKNLLTLTVMISGLAQNGFG 406
Query: 188 NEALALFRKMV-----ACEYTEPSEITILAVLPAIWQNGDVKSCQLIH-GYGEKRGFTAF 241
+E L LF++M C++ +T +VL A+ +NG QL+H GY
Sbjct: 407 DEGLKLFKQMRLDGFEPCDFAFAGALTACSVLGAL-ENGRQLHAQLVHLGYESS------ 459
Query: 242 DIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGR 301
+ V N +I YAKCG + +A +F +++ +LVSW S+I+ HG G +A+E F +
Sbjct: 460 -LSVGNAMISMYAKCGVVEAAESVF--VTMPSVDLVSWNSMIAALGQHGHGVKAIELFDQ 516
Query: 302 MQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAG 361
M K G+ P+R+TFL+VL ACSH GLVE+G ++F+ M+E + P HY ++D+ RAG
Sbjct: 517 MLKEGVFPDRITFLTVLTACSHAGLVEKGRHYFNSMLESYGITPCEDHYARMVDLFCRAG 576
Query: 362 RLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMY 421
A +PS+ VW LL C HGN+++G ++ ++ G YVL+
Sbjct: 577 MFSYARIVIDSMPSK-PGAPVWEALLAGCRIHGNMDLGIEAAEQLFKLMPQNDGTYVLLS 635
Query: 422 NILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
NI A VGR+ D ++R++M ++ K P CS +
Sbjct: 636 NIYADVGRWNDVAKVRKLMRDQAVRKEPACSWI 668
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 115/454 (25%), Positives = 190/454 (41%), Gaps = 60/454 (13%)
Query: 28 LHHSQLFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCAT- 86
+ S +N ++ Y+ A L++ +++ P D FT++ ++
Sbjct: 109 MRDSVFYNAMITGYAHNGDGHSALELFRAMRR------DDFRP--DDFTFTSVLSALVLF 160
Query: 87 LSHPNLGTQLHAVISKVGFQS-HVYVNTALVNMYVS----LGF----LKDSSKLFDEMPE 137
+ + Q+H + K G V AL+++YV LG + + KLFDEMP+
Sbjct: 161 VGNEQQCGQMHCAVVKTGMGCVSSSVLNALLSVYVKRASELGIPCSAMVSARKLFDEMPK 220
Query: 138 RNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKM 197
R+ +TW MITG V+ +L AR +FE M +W +I GY EAL L RKM
Sbjct: 221 RDELTWTTMITGYVRNDDLNGAREVFEAMVENLGAAWNAMISGYVHCGCFQEALTLCRKM 280
Query: 198 --VACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFT---AFDIRVLNCLIDT 252
+ ++ +IT ++ A G + + +H Y K +F + V N LI
Sbjct: 281 RFLGIQF---DDITYTTIISACANVGSFQMGKQMHAYILKNELNPNHSFCLSVSNALITL 337
Query: 253 YAKCGCIFSASKLFEDISVER-----------------------------KNLVSWTSII 283
Y K + A K+F + V KNL++ T +I
Sbjct: 338 YCKNNKVDEARKIFYAMPVRNIITWNAILSGYVNAGRMEEAKSFFEEMPVKNLLTLTVMI 397
Query: 284 SGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEV 343
SG A +G G E ++ F +M+ G +P F L ACS G +E G ++V
Sbjct: 398 SGLAQNGFGDEGLKLFKQMRLDGFEPCDFAFAGALTACSVLGALENGRQLHAQLV-HLGY 456
Query: 344 LPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVT 403
+ +I M + G +E AE + +PS D+V W +++ A HG+ +
Sbjct: 457 ESSLSVGNAMISMYAKCGVVEAAESVFVTMPS--VDLVSWNSMIAALGQHGHGVKAIELF 514
Query: 404 RKILEMERGYGGDYVLMYNILAGVGRFGDAERLR 437
++L + G D + +L G E+ R
Sbjct: 515 DQML--KEGVFPDRITFLTVLTACSHAGLVEKGR 546
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/353 (23%), Positives = 154/353 (43%), Gaps = 52/353 (14%)
Query: 91 NLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGL 150
+L +HA + GF+ + L+ MY + + +LF+E+P + + +IT
Sbjct: 30 SLARAVHAHMIASGFKPRGHFLNRLLEMYCKSSNVVYARQLFEEIPNPDAIARTTLITAY 89
Query: 151 VKWGELEFARSLFEEMPC--RNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEI 208
G LE R +F P R+ V + +I GY + AL LFR M ++ P +
Sbjct: 90 CALGNLELGREIFNGTPLYMRDSVFYNAMITGYAHNGDGHSALELFRAMRRDDF-RPDDF 148
Query: 209 TILAVLPA-IWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAK--------CGCI 259
T +VL A + G+ + C +H K G VLN L+ Y K C +
Sbjct: 149 TFTSVLSALVLFVGNEQQCGQMHCAVVKTGMGCVSSSVLNALLSVYVKRASELGIPCSAM 208
Query: 260 FSASKLFEDIS--------------VERKNL---------------VSWTSIISGFAMHG 290
SA KLF+++ V +L +W ++ISG+ G
Sbjct: 209 VSARKLFDEMPKRDELTWTTMITGYVRNDDLNGAREVFEAMVENLGAAWNAMISGYVHCG 268
Query: 291 MGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHY 350
+EA+ +M+ +G++ + +T+ ++++AC++ G + G +++ E+ P+ H
Sbjct: 269 CFQEALTLCRKMRFLGIQFDDITYTTIISACANVGSFQMGKQMHAYILKN-ELNPN--HS 325
Query: 351 GC------LIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVE 397
C LI + + ++++A K +P + +++ W +L G +E
Sbjct: 326 FCLSVSNALITLYCKNNKVDEARKIFYAMP--VRNIITWNAILSGYVNAGRME 376
>gi|77553484|gb|ABA96280.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|125578286|gb|EAZ19432.1| hypothetical protein OsJ_34992 [Oryza sativa Japonica Group]
Length = 518
Score = 251 bits (642), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 152/441 (34%), Positives = 234/441 (53%), Gaps = 42/441 (9%)
Query: 41 YSLAESPQKAFLLYKQLQQIYTHSHSP-LPPLFDSFTYSF--LIRTCATLSHPNLGTQLH 97
+S +++P A LL+ + P P L S +F R A + G +LH
Sbjct: 76 FSSSQAPSSALLLFNHASSCSLPTPLPTFPALLKSCARAFNHSSRASAASVFVSKGMELH 135
Query: 98 AVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGL------- 150
+ K+G YV ALV+MY G L D+ K FDEMP++N V+WN ++
Sbjct: 136 CRVLKLGCGKDRYVRNALVSMYGKFGRLGDARKAFDEMPDKNAVSWNALVGAHRAAADWM 195
Query: 151 -------------VKWGELEFARS-----------LFEEMPCRNVVSWTGIIDGYTRMNR 186
+ W E AR+ +F EMP R+ VSW +I GYT++ +
Sbjct: 196 GADRVSQAMPVRNLSWWNAEIARNVRIGYMDEAARIFSEMPERDAVSWNSLISGYTKLGK 255
Query: 187 SNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVL 246
+AL +F++M +P+E+T++ VL A + G + IH + +G A D V
Sbjct: 256 YTQALGIFQEMQE-NGIQPTELTLVLVLGACAKIGKLDLGTNIHRNLQNKGIVA-DGLVG 313
Query: 247 NCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVG 306
N LID YAKCG + A K+F+ +S+ +++ W ++I GF++HG +EA+E F M+
Sbjct: 314 NALIDMYAKCGMLDLAKKVFDRMSM--RDITCWNAMIVGFSVHGCSREALELFDSMK--- 368
Query: 307 LKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQA 366
++PN VTFL VL ACSHGGLV EG +F+ M+E+ ++PD+KHYGC+IDML R G++E+A
Sbjct: 369 IEPNPVTFLGVLTACSHGGLVNEGRKYFNSMIEDYRIVPDVKHYGCMIDMLCRYGKIEEA 428
Query: 367 EKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAG 426
PS + V+W+ LL AC HG++++ ++ E+ G V + N+ A
Sbjct: 429 YLMIKENPSTASS-VLWKMLLAACRVHGHIDLAYMFFHELRELILTDNGGLVTISNVYAE 487
Query: 427 VGRFGDAERLRRVMDERNAFK 447
R+ D E LR + +A K
Sbjct: 488 AKRWDDVEHLRMKVRCNSALK 508
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 76/166 (45%), Gaps = 9/166 (5%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+N+L+ Y+ +A +++++Q+ + + P T ++ CA + +LG
Sbjct: 243 WNSLISGYTKLGKYTQALGIFQEMQE------NGIQP--TELTLVLVLGACAKIGKLDLG 294
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
T +H + G + V AL++MY G L + K+FD M R++ WN MI G
Sbjct: 295 TNIHRNLQNKGIVADGLVGNALIDMYAKCGMLDLAKKVFDRMSMRDITCWNAMIVGFSVH 354
Query: 154 GELEFARSLFEEMPCR-NVVSWTGIIDGYTRMNRSNEALALFRKMV 198
G A LF+ M N V++ G++ + NE F M+
Sbjct: 355 GCSREALELFDSMKIEPNPVTFLGVLTACSHGGLVNEGRKYFNSMI 400
>gi|115486992|ref|NP_001065983.1| Os12g0114400 [Oryza sativa Japonica Group]
gi|113648490|dbj|BAF29002.1| Os12g0114400, partial [Oryza sativa Japonica Group]
Length = 504
Score = 251 bits (642), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 152/441 (34%), Positives = 234/441 (53%), Gaps = 42/441 (9%)
Query: 41 YSLAESPQKAFLLYKQLQQIYTHSHSP-LPPLFDSFTYSF--LIRTCATLSHPNLGTQLH 97
+S +++P A LL+ + P P L S +F R A + G +LH
Sbjct: 62 FSSSQAPSSALLLFNHASSCSLPTPLPTFPALLKSCARAFNHSSRASAASVFVSKGMELH 121
Query: 98 AVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGL------- 150
+ K+G YV ALV+MY G L D+ K FDEMP++N V+WN ++
Sbjct: 122 CRVLKLGCGKDRYVRNALVSMYGKFGRLGDARKAFDEMPDKNAVSWNALVGAHRAAADWM 181
Query: 151 -------------VKWGELEFARS-----------LFEEMPCRNVVSWTGIIDGYTRMNR 186
+ W E AR+ +F EMP R+ VSW +I GYT++ +
Sbjct: 182 GADRVSQAMPVRNLSWWNAEIARNVRIGYMDEAARIFSEMPERDAVSWNSLISGYTKLGK 241
Query: 187 SNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVL 246
+AL +F++M +P+E+T++ VL A + G + IH + +G A D V
Sbjct: 242 YTQALGIFQEMQE-NGIQPTELTLVLVLGACAKIGKLDLGTNIHRNLQNKGIVA-DGLVG 299
Query: 247 NCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVG 306
N LID YAKCG + A K+F+ +S+ +++ W ++I GF++HG +EA+E F M+
Sbjct: 300 NALIDMYAKCGMLDLAKKVFDRMSM--RDITCWNAMIVGFSVHGCSREALELFDSMK--- 354
Query: 307 LKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQA 366
++PN VTFL VL ACSHGGLV EG +F+ M+E+ ++PD+KHYGC+IDML R G++E+A
Sbjct: 355 IEPNPVTFLGVLTACSHGGLVNEGRKYFNSMIEDYRIVPDVKHYGCMIDMLCRYGKIEEA 414
Query: 367 EKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAG 426
PS + V+W+ LL AC HG++++ ++ E+ G V + N+ A
Sbjct: 415 YLMIKENPSTASS-VLWKMLLAACRVHGHIDLAYMFFHELRELILTDNGGLVTISNVYAE 473
Query: 427 VGRFGDAERLRRVMDERNAFK 447
R+ D E LR + +A K
Sbjct: 474 AKRWDDVEHLRMKVRCNSALK 494
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 76/166 (45%), Gaps = 9/166 (5%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+N+L+ Y+ +A +++++Q+ + + P T ++ CA + +LG
Sbjct: 229 WNSLISGYTKLGKYTQALGIFQEMQE------NGIQP--TELTLVLVLGACAKIGKLDLG 280
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
T +H + G + V AL++MY G L + K+FD M R++ WN MI G
Sbjct: 281 TNIHRNLQNKGIVADGLVGNALIDMYAKCGMLDLAKKVFDRMSMRDITCWNAMIVGFSVH 340
Query: 154 GELEFARSLFEEMPCR-NVVSWTGIIDGYTRMNRSNEALALFRKMV 198
G A LF+ M N V++ G++ + NE F M+
Sbjct: 341 GCSREALELFDSMKIEPNPVTFLGVLTACSHGGLVNEGRKYFNSMI 386
>gi|347954510|gb|AEP33755.1| chloroplast biogenesis 19, partial [Olimarabidopsis pumila]
Length = 475
Score = 251 bits (642), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 142/384 (36%), Positives = 217/384 (56%), Gaps = 9/384 (2%)
Query: 75 FTYSFLIRTCATL--SHPNLGTQLHAVISKVGF-QSHVYVNTALVNMYVSLGFLKDSSKL 131
T+ L+ C LG LH K+G ++HV V TA++ MY G +K + +
Sbjct: 47 ITFIALLSGCGDFPSGSETLGDLLHGYACKLGLDRNHVMVGTAILGMYSKRGRVKKARLV 106
Query: 132 FDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEAL 191
FD M ++N VTWN MI G ++ G++ A LF++MP +++SWT +++G+ + EAL
Sbjct: 107 FDYMDDKNSVTWNTMIDGYMRSGQVHNAVKLFDKMPEPDLISWTAMVNGFVKKGFHEEAL 166
Query: 192 ALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLID 251
FR+M +P + I+A L A G + +H Y + F ++RV N LID
Sbjct: 167 VWFREM-QISGVKPDYVAIIAALNACTNLGALSLGLWVHRYVMSQDFKN-NVRVSNSLID 224
Query: 252 TYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNR 311
Y +CGC+ A ++F+ + E++ +VSW S+I GFA +G E++ F +MQ+ G KPN
Sbjct: 225 LYCRCGCVEFAREVFDKM--EKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEEGFKPNA 282
Query: 312 VTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTAL 371
VTF L ACSH GLV+EGL FF M + + P I+HYGCL+D+ RAGRLE A K
Sbjct: 283 VTFTGALTACSHVGLVDEGLRFFQSMKRDYNISPRIEHYGCLVDLYSRAGRLEDALKVVQ 342
Query: 372 GIPSEITDVVVWRTLLGACSFHG-NVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRF 430
+P + +VV+ +LL AC HG N + ER+ + + ++ +YV++ N+ A ++
Sbjct: 343 SMPMKPNEVVI-GSLLAACRNHGNNTVLAERLMKHLSDLNVKSHSNYVILSNMYAADAKW 401
Query: 431 GDAERLRRVMDERNAFKVPGCSLV 454
A R+RR M K PG S +
Sbjct: 402 EGASRMRRKMKGLGLKKQPGFSSI 425
Score = 38.9 bits (89), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 62/140 (44%), Gaps = 10/140 (7%)
Query: 274 KNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNF 333
+ +VSWTS I+ EA + F M+ G++P +TF+++L+ C G G
Sbjct: 9 ETIVSWTSRITLLTRSAXLAEAAKEFADMRLAGVEPTHITFIALLSGC---GDFPSGSET 65
Query: 334 FDKMVE--ECEVLPDIKHY---GCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLG 388
++ C++ D H ++ M + GR+++A + + + V W T++
Sbjct: 66 LGDLLHGYACKLGLDRNHVMVGTAILGMYSKRGRVKKARLVFDYMDDK--NSVTWNTMID 123
Query: 389 ACSFHGNVEMGERVTRKILE 408
G V ++ K+ E
Sbjct: 124 GYMRSGQVHNAVKLFDKMPE 143
>gi|347954500|gb|AEP33750.1| chloroplast biogenesis 19, partial [Lepidium sativum]
Length = 494
Score = 251 bits (642), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 142/384 (36%), Positives = 219/384 (57%), Gaps = 9/384 (2%)
Query: 75 FTYSFLIRTCATLSHPN--LGTQLHAVISKVGF-QSHVYVNTALVNMYVSLGFLKDSSKL 131
T+ L+ C + L LH K+G +SHV V TA++ MY G ++ + +
Sbjct: 69 ITFISLLSACGNFPSGSEALSDLLHGYACKLGLDRSHVMVGTAILGMYSKRGHVRKARLV 128
Query: 132 FDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEAL 191
FD M ++N VTWN MI G ++ G+++ A +F+EMP R+++SWT +I G+ + EAL
Sbjct: 129 FDYMEDKNSVTWNTMIDGYMRNGQVDNAVKVFDEMPERDLISWTAMITGFVKKGFHEEAL 188
Query: 192 ALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLID 251
A FR+M P + I+A L A G + H Y + F ++RV N LID
Sbjct: 189 AWFREM-QISGVNPDYVAIIAALAACTNLGALSFGLWAHRYVVSQDFRN-NVRVSNSLID 246
Query: 252 TYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNR 311
Y +CGC+ A ++F+ ++E++ +VSW S+I GFA +G E++ F +MQ+ G KP+
Sbjct: 247 LYCRCGCVEFARQVFD--TMEKRTVVSWNSVIVGFAANGNANESLVYFRKMQEEGFKPDA 304
Query: 312 VTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTAL 371
VTF L ACSH GLVEEG +F M + + P I+H+GCL+D+ RAGRLE A K
Sbjct: 305 VTFTGALTACSHVGLVEEGFQYFQMMKTDYRISPRIEHFGCLVDLYSRAGRLEDAIKVVE 364
Query: 372 GIPSEITDVVVWRTLLGACSFHGN-VEMGERVTRKILEMERGYGGDYVLMYNILAGVGRF 430
+P + +VV+ +LL AC HGN + ER+ + I +++ +YV++ N+ A G++
Sbjct: 365 SMPMKPNEVVIG-SLLAACRNHGNHTILAERLMKHISDLDVKGHSNYVILSNMYAADGKW 423
Query: 431 GDAERLRRVMDERNAFKVPGCSLV 454
A ++RR M K PG S +
Sbjct: 424 EGASKMRRKMKGLGLKKQPGYSSI 447
Score = 45.4 bits (106), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 62/140 (44%), Gaps = 6/140 (4%)
Query: 274 KNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNF 333
+ +VSWTS I+ + EA F M+ G++PN +TF+S+L+AC G G
Sbjct: 31 ETIVSWTSRITLLSRDDRLAEAAREFSDMRLAGIEPNHITFISLLSAC---GNFPSGSEA 87
Query: 334 FDKMVE--ECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIP-SEITDVVVWRTLLGAC 390
++ C++ D H +LG + K L E + V W T++
Sbjct: 88 LSDLLHGYACKLGLDRSHVMVGTAILGMYSKRGHVRKARLVFDYMEDKNSVTWNTMIDGY 147
Query: 391 SFHGNVEMGERVTRKILEME 410
+G V+ +V ++ E +
Sbjct: 148 MRNGQVDNAVKVFDEMPERD 167
>gi|224129982|ref|XP_002320719.1| predicted protein [Populus trichocarpa]
gi|222861492|gb|EEE99034.1| predicted protein [Populus trichocarpa]
Length = 643
Score = 251 bits (642), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 129/342 (37%), Positives = 210/342 (61%), Gaps = 4/342 (1%)
Query: 113 TALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVV 172
++++ V G ++D+ LFD MP R++V+W MI G K G ++ ARSLF+EMP R+VV
Sbjct: 262 NSMIDGCVKCGRMEDAQGLFDRMPNRDIVSWANMIDGYAKNGRVDIARSLFDEMPERDVV 321
Query: 173 SWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGY 232
++ ++ GY + EAL +F M + T+L L AI Q G + IH +
Sbjct: 322 AYNAMMGGYVQNGYCMEALGIFYGMQSDGNFLLDNATLLIALSAIAQLGHIDKGVAIHRF 381
Query: 233 GEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMG 292
E+ GF+ D R+ LID Y+KCG I +A +FE+I + K++ W +II G A+HG+G
Sbjct: 382 IEEIGFS-LDGRLGVALIDMYSKCGSIENAMMVFENI--KEKSVDHWNAIIGGLAIHGLG 438
Query: 293 KEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGC 352
+ A + M+++ ++P+ +TF+ +LNAC H GLV+EG+ F+ M +V P ++HYGC
Sbjct: 439 ELAFDFLMEMERMRVEPDDITFIGLLNACGHAGLVKEGMMCFELMRRVHKVEPKLQHYGC 498
Query: 353 LIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERG 412
++D+LGRAG +E+A+ +P E D V+WR+LL AC H + +G+ V ++ ++
Sbjct: 499 MVDILGRAGHIEEAKNFVEEMPFEPND-VIWRSLLSACKTHESFNVGQPVAENLMRLDSP 557
Query: 413 YGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
YVL N+ AG+G++ D ++R +M ++N K+PGCS +
Sbjct: 558 SPSSYVLASNMYAGLGKWNDVRKVRAMMKQKNLKKIPGCSWI 599
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 115/437 (26%), Positives = 200/437 (45%), Gaps = 58/437 (13%)
Query: 15 TQIHSHLLTTNSLLHHSQLFNTLLHFYSLAESPQKAF----------------------- 51
QIH+ LLTT + + +L F + +P F
Sbjct: 32 NQIHARLLTTGFIKNTFLTTKIILSFSTSLHAPLIEFARFIFFRHHAFEFDEKEEEEEKD 91
Query: 52 -LLYKQLQQIYTHSHSPLPPLF------------DSFTYSFLIRTCATLSHPNLGTQLHA 98
L+ + + Y+H H P ++ D FT S +++ C+ + G Q+H
Sbjct: 92 PFLWNAIIKTYSHGHDPKEAMWLVSLMLENGAFADKFTLSLVLKACSRVGLVKEGMQIHG 151
Query: 99 VISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEF 158
++ K+ F S +++ L++ YV G L +S++FD MP+R+ V++N MI G VK G ++
Sbjct: 152 LLKKLEFGSDLFLQNCLISFYVKCGCLVRASQVFDRMPKRDSVSYNSMIDGYVKGGRIDL 211
Query: 159 ARSLFEEMPC--RNVVSWTGIIDGYTRMNRSN-EALALFRKMVACEYTEPSEITILAVLP 215
AR +F+ +P RN++SW +I GY + A LF KM E I+ +++
Sbjct: 212 ARVVFDCIPLEERNLISWNSLIRGYAQSEDGILVAWQLFAKM-----PERDLISWNSMID 266
Query: 216 AIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKN 275
+ G ++ Q + R DI +ID YAK G + A LF+++ ++
Sbjct: 267 GCVKCGRMEDAQGLFDRMPNR-----DIVSWANMIDGYAKNGRVDIARSLFDEMP--ERD 319
Query: 276 LVSWTSIISGFAMHGMGKEAVENFGRMQKVG-LKPNRVTFLSVLNACSHGGLVEEGLNFF 334
+V++ +++ G+ +G EA+ F MQ G + T L L+A + G +++G+
Sbjct: 320 VVAYNAMMGGYVQNGYCMEALGIFYGMQSDGNFLLDNATLLIALSAIAQLGHIDKGVA-I 378
Query: 335 DKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHG 394
+ +EE D + LIDM + G +E A I + D W ++G + HG
Sbjct: 379 HRFIEEIGFSLDGRLGVALIDMYSKCGSIENAMMVFENIKEKSVD--HWNAIIGGLAIHG 436
Query: 395 NVEMGERVTRKILEMER 411
+GE ++EMER
Sbjct: 437 ---LGELAFDFLMEMER 450
>gi|125546973|gb|EAY92795.1| hypothetical protein OsI_14599 [Oryza sativa Indica Group]
Length = 530
Score = 251 bits (642), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 135/366 (36%), Positives = 208/366 (56%), Gaps = 5/366 (1%)
Query: 91 NLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGL 150
N G +HA++ G V+V+T L+ +Y G L S ++FD+MP R+ +TWN M+
Sbjct: 132 NPGKMIHALVVTSGIVPDVFVSTELIRVYGESGELPVSRRVFDDMPSRSTITWNAMLHQY 191
Query: 151 VKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACE--YTEPSEI 208
+ G+++ A +F MP R+VVSW ++ GY R EAL LFR+MV+ P+
Sbjct: 192 ARHGKVDTAYEMFLAMPRRDVVSWNTVLAGYCVAGRCREALGLFRQMVSPSSCAVHPNVP 251
Query: 209 TILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFED 268
T+ +L A G +++ +H Y E+ D + CLID Y KCG I +A ++FE
Sbjct: 252 TMSTILGACAGAGCLETGIWVHAYIERNRMND-DGYLDRCLIDMYCKCGSIDNALQVFEK 310
Query: 269 ISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVE 328
+ +K+L SWT++I G AMHG +A+ F MQ G+ P+ VT + VLNAC+HGGLV+
Sbjct: 311 -APRKKDLFSWTTVICGLAMHGRTTDALRMFDMMQDNGICPDDVTLVGVLNACAHGGLVD 369
Query: 329 EGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLG 388
EGL +F M + + P I+HYGC+ID+LGR GRL++A +P + + V+W L
Sbjct: 370 EGLGYFYSMEAKFRITPKIEHYGCMIDLLGRIGRLQEAYSMIRTMPMD-PNTVIWGAFLS 428
Query: 389 ACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKV 448
AC HGN+E+G+ ++ ++ V++ ++ A + R RR M+ K
Sbjct: 429 ACKVHGNMELGKIAAEELTRLDPDDPWGRVMLSSMYAKAQDWIGLARERREMNSMQVKKT 488
Query: 449 PGCSLV 454
PGCS +
Sbjct: 489 PGCSSI 494
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 94/345 (27%), Positives = 161/345 (46%), Gaps = 36/345 (10%)
Query: 70 PLFDSFTYSFLIRTCATLSHPN--LGTQLHAVISKVGF-QSHVYVNTALVNMYVSLGFLK 126
PL S T LI++ + H + +H ++ K G ++ TAL++ Y +LG
Sbjct: 3 PLTLSSTALRLIKSLSPAVHGAHLSASSIHCLLLKAGLLHVGAHLPTALLSAYAALGSPD 62
Query: 127 DSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNR 186
+ +LFDEMPE+ LV M V G+ A ++F +M + DG N
Sbjct: 63 HARRLFDEMPEQGLVPRTAMARAHVASGQAAQAIAVFGDM----------VADGVFPDNV 112
Query: 187 SNEALALFRKMVACEYT---EPSE-ITILAVLPAIWQNGDVKSCQLIHGYGE-------K 235
+ A+AL A +T P + I L V I + V S +LI YGE +
Sbjct: 113 A-VAVALGACHGAGSWTARRNPGKMIHALVVTSGIVPDVFV-STELIRVYGESGELPVSR 170
Query: 236 RGFTAFDIR---VLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMG 292
R F R N ++ YA+ G + +A ++F +++ R+++VSW ++++G+ + G
Sbjct: 171 RVFDDMPSRSTITWNAMLHQYARHGKVDTAYEMF--LAMPRRDVVSWNTVLAGYCVAGRC 228
Query: 293 KEAVENFGRM---QKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKH 349
+EA+ F +M + PN T ++L AC+ G +E G+ + +E + D
Sbjct: 229 REALGLFRQMVSPSSCAVHPNVPTMSTILGACAGAGCLETGI-WVHAYIERNRMNDDGYL 287
Query: 350 YGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHG 394
CLIDM + G ++ A + P + D+ W T++ + HG
Sbjct: 288 DRCLIDMYCKCGSIDNALQVFEKAPRK-KDLFSWTTVICGLAMHG 331
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/278 (22%), Positives = 112/278 (40%), Gaps = 50/278 (17%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+NT+L Y +A ++A L++Q+ + + P P T S ++ CA G
Sbjct: 215 WNTVLAGYCVAGRCREALGLFRQMVSPSSCAVHPNVP-----TMSTILGACAGAGCLETG 269
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMP-ERNLVTWNVMITGLVK 152
+HA I + Y++ L++MY G + ++ ++F++ P +++L +W +I GL
Sbjct: 270 IWVHAYIERNRMNDDGYLDRCLIDMYCKCGSIDNALQVFEKAPRKKDLFSWTTVICGLAM 329
Query: 153 WGELEFARSLFEEMP----CRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEI 208
G A +F+ M C + V+ G+++ +E L F M A P
Sbjct: 330 HGRTTDALRMFDMMQDNGICPDDVTLVGVLNACAHGGLVDEGLGYFYSMEAKFRITPK-- 387
Query: 209 TILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFED 268
I YG C+ID + G + A +
Sbjct: 388 --------------------IEHYG--------------CMIDLLGRIGRLQEAYSMIRT 413
Query: 269 ISVERKNLVSWTSIISGFAMHG---MGKEAVENFGRMQ 303
+ ++ N V W + +S +HG +GK A E R+
Sbjct: 414 MPMD-PNTVIWGAFLSACKVHGNMELGKIAAEELTRLD 450
>gi|449530628|ref|XP_004172296.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g21090-like [Cucumis sativus]
Length = 611
Score = 251 bits (642), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 138/421 (32%), Positives = 238/421 (56%), Gaps = 12/421 (2%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+NT++ Y+ +A LY+ ++ L F++F+++ ++ C L L
Sbjct: 163 WNTIVLAYAKQGCFNEAIGLYRDFRR--------LDMGFNAFSFAGVLILCVKLKELQLA 214
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
Q+H + GF S++ +++++V+ Y G ++ + LFDEM +++ W +++G KW
Sbjct: 215 KQVHGQVLVAGFLSNLVLSSSIVDAYSKCGEMRCARTLFDEMLVKDIHAWTTIVSGYAKW 274
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
G++ A LF +MP +N VSW+ +I GY R + +EAL F KM+ P + T +
Sbjct: 275 GDMNSASELFHQMPEKNPVSWSALISGYARNSLGHEALDYFTKMMKFG-INPEQYTFSSC 333
Query: 214 LPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVER 273
L A +K + +HGY + F I V++ LID Y+KCG + ++ +F + +
Sbjct: 334 LCACASIAALKHGKQVHGYLIRTYFRCNTI-VVSSLIDMYSKCGMLEASCCVFHLMG-NK 391
Query: 274 KNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNF 333
+++V W ++IS A +G G++A++ F M + GLKP+R+TF+ +L+ACSH GLV+EGL F
Sbjct: 392 QDVVVWNTMISALAQNGHGEKAMQMFNDMVESGLKPDRITFIVILSACSHSGLVQEGLRF 451
Query: 334 FDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFH 393
F M + V PD +HY CLID+LGRAG + + + D VW LLG C H
Sbjct: 452 FKAMTYDHGVFPDQEHYACLIDLLGRAGCFVELVNELENMSCKPDD-RVWSALLGVCRIH 510
Query: 394 GNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSL 453
N+E+G +V +++E++ YV + ++ A +G++ E++R +MDE+ K G S
Sbjct: 511 NNIELGRKVAERVIELKPQSSAAYVSLASLYAFLGKWESVEKVRELMDEKFIRKERGISW 570
Query: 454 V 454
+
Sbjct: 571 I 571
Score = 141 bits (355), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 115/386 (29%), Positives = 179/386 (46%), Gaps = 44/386 (11%)
Query: 80 LIRTCATLSHPNLGTQLHAVISKVGFQS-HVYVNTALVNMYVSLGFLKDSSKLFDEMPER 138
L+R CA + G +H + GF+ V L+ MY G ++ K+FD+M R
Sbjct: 68 LLRLCAKAKYFKGGKCVHLHLKHTGFKRPTTIVANHLIGMYFECGRDVEARKVFDKMSVR 127
Query: 139 NLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRK-- 196
NL +WN M+ G K G++ AR LF+ M ++VVSW I+ Y + NEA+ L+R
Sbjct: 128 NLYSWNHMLAGYAKLGDVNNARKLFDRMMEKDVVSWNTIVLAYAKQGCFNEAIGLYRDFR 187
Query: 197 --------------MVACEYTEPSEITILA---VLPAIWQNGDVKSCQLIHGY---GEKR 236
++ C + ++ VL A + + V S ++ Y GE R
Sbjct: 188 RLDMGFNAFSFAGVLILCVKLKELQLAKQVHGQVLVAGFLSNLVLSSSIVDAYSKCGEMR 247
Query: 237 -GFTAF------DIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMH 289
T F DI ++ YAK G + SAS+LF + KN VSW+++ISG+A +
Sbjct: 248 CARTLFDEMLVKDIHAWTTIVSGYAKWGDMNSASELFHQMP--EKNPVSWSALISGYARN 305
Query: 290 GMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVE---ECEVLPD 346
+G EA++ F +M K G+ P + TF S L AC+ ++ G ++ C +
Sbjct: 306 SLGHEALDYFTKMMKFGINPEQYTFSSCLCACASIAALKHGKQVHGYLIRTYFRCNTIV- 364
Query: 347 IKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKI 406
LIDM + G LE A + DVVVW T++ A + +G+ GE+ +
Sbjct: 365 ---VSSLIDMYSKCGMLE-ASCCVFHLMGNKQDVVVWNTMISALAQNGH---GEKAMQMF 417
Query: 407 LEM-ERGYGGDYVLMYNILAGVGRFG 431
+M E G D + IL+ G
Sbjct: 418 NDMVESGLKPDRITFIVILSACSHSG 443
>gi|356544545|ref|XP_003540710.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Glycine max]
Length = 705
Score = 251 bits (642), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 146/388 (37%), Positives = 221/388 (56%), Gaps = 10/388 (2%)
Query: 73 DSFTYSFLIRTCATLSHPNLGTQLHA-VISKVGFQSHVYVNTALVNMYVSLGFLKDSSKL 131
D T + ++ CA+ S G Q+HA V+ + +++ + + ALV+MY + ++ +
Sbjct: 251 DEITLASVVSACASWSAIREGLQIHARVVKRDKYRNDLVLGNALVDMYAKCRRVNEARLV 310
Query: 132 FDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEAL 191
FD MP RN+V+ M+ G + ++ AR +F M +NVVSW +I GYT+ + EA+
Sbjct: 311 FDRMPLRNVVSETSMVCGYARAASVKAARLMFSNMMEKNVVSWNALIAGYTQNGENEEAV 370
Query: 192 ALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGF-----TAFDIRVL 246
LF ++ E P+ T +L A D+K + H K GF DI V
Sbjct: 371 RLFL-LLKRESIWPTHYTFGNLLNACANLADLKLGRQAHTQILKHGFWFQSGEESDIFVG 429
Query: 247 NCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVG 306
N LID Y KCG + +FE + VER ++VSW ++I G+A +G G A+E F +M G
Sbjct: 430 NSLIDMYMKCGMVEDGCLVFERM-VER-DVVSWNAMIVGYAQNGYGTNALEIFRKMLVSG 487
Query: 307 LKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQA 366
KP+ VT + VL+ACSH GLVEEG +F M E + P H+ C++D+LGRAG L++A
Sbjct: 488 QKPDHVTMIGVLSACSHAGLVEEGRRYFHSMRTELGLAPMKDHFTCMVDLLGRAGCLDEA 547
Query: 367 EKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAG 426
+P + D VVW +LL AC HGN+E+G+ V K++E++ G YVL+ N+ A
Sbjct: 548 NDLIQTMPMQ-PDNVVWGSLLAACKVHGNIELGKYVAEKLMEIDPLNSGPYVLLSNMYAE 606
Query: 427 VGRFGDAERLRRVMDERNAFKVPGCSLV 454
+GR+ D R+R+ M +R K PGCS +
Sbjct: 607 LGRWKDVVRVRKQMRQRGVIKQPGCSWI 634
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 85/296 (28%), Positives = 160/296 (54%), Gaps = 4/296 (1%)
Query: 71 LFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSK 130
DS ++ L+ +C ++HA I K F S +++ LV+ Y G+ +D+ K
Sbjct: 16 FLDSSPFAKLLDSCVRSKSGIDARRIHARIIKTQFSSEIFIQNRLVDAYGKCGYFEDARK 75
Query: 131 LFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEA 190
+FD MP+RN ++N +++ L K+G+L+ A ++F+ MP + SW ++ G+ + +R EA
Sbjct: 76 VFDRMPQRNTFSYNAVLSVLTKFGKLDEAFNVFKSMPEPDQCSWNAMVSGFAQHDRFEEA 135
Query: 191 LALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLI 250
L F M + ++ +E + + L A D+ IH K + D+ + + L+
Sbjct: 136 LRFFVDMHSEDFV-LNEYSFGSALSACAGLTDLNMGIQIHALISKSRYL-LDVYMGSALV 193
Query: 251 DTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPN 310
D Y+KCG + A + F+ ++V +N+VSW S+I+ + +G +A+E F M G++P+
Sbjct: 194 DMYSKCGVVACAQRAFDGMAV--RNIVSWNSLITCYEQNGPAGKALEVFVMMMDNGVEPD 251
Query: 311 RVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQA 366
+T SV++AC+ + EGL ++V+ + D+ L+DM + R+ +A
Sbjct: 252 EITLASVVSACASWSAIREGLQIHARVVKRDKYRNDLVLGNALVDMYAKCRRVNEA 307
>gi|297819260|ref|XP_002877513.1| hypothetical protein ARALYDRAFT_905886 [Arabidopsis lyrata subsp.
lyrata]
gi|297323351|gb|EFH53772.1| hypothetical protein ARALYDRAFT_905886 [Arabidopsis lyrata subsp.
lyrata]
Length = 657
Score = 251 bits (642), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 137/423 (32%), Positives = 236/423 (55%), Gaps = 48/423 (11%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCA----TLS 88
++N L +LA ++ LY ++ +I S D FTY+++++ C T
Sbjct: 145 VWNALFRALTLAGHGEEVLGLYWKMNRIGVES--------DRFTYTYVLKACVASECTAD 196
Query: 89 HPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMIT 148
H G ++HA +++ G+ SHVY+ T LV+MY
Sbjct: 197 HLTKGKEIHAHLTRRGYNSHVYIMTTLVDMYA---------------------------- 228
Query: 149 GLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVA-CEYTEPSE 207
++G +++A +F MP RNVVSW+ +I Y + ++ EAL FR+M+ + + P+
Sbjct: 229 ---RFGCVDYASYVFNGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMTETKDSSPNS 285
Query: 208 ITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFE 267
+T+++VL A ++ +LIHGY +RG + + V++ L+ Y +CG + ++F+
Sbjct: 286 VTMVSVLQACASLAALEQGRLIHGYILRRGLDSI-LPVISALVTMYGRCGKLDVGQRVFD 344
Query: 268 DISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLV 327
+ +++VSW S+IS + +HG G++A++ F M G P VTF+SVL ACSH GLV
Sbjct: 345 --RMHDRDVVSWNSLISSYGVHGYGRKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLV 402
Query: 328 EEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLL 387
EEG F+ M + + P ++HY C++D+LGRA RL++A K + +E VW +LL
Sbjct: 403 EEGKRLFESMWRDHGIKPQVEHYACMVDLLGRANRLDEAAKMVQDMRTE-PGPKVWGSLL 461
Query: 388 GACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFK 447
G+C HGNVE+ ER +R++ +E G+YVL+ +I A + + +R++++++ R K
Sbjct: 462 GSCRIHGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLEHRGLQK 521
Query: 448 VPG 450
+PG
Sbjct: 522 LPG 524
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 108/446 (24%), Positives = 176/446 (39%), Gaps = 94/446 (21%)
Query: 55 KQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTA 114
KQ ++ + SP TY LI C S + G ++H I G ++ T
Sbjct: 63 KQALRVLSQESSP-----SQQTYELLILCCGHRSSLSDGLRVHRHILDNGSDQDPFLATK 117
Query: 115 LVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSW 174
L+ MY LG +++AR +F++ R + W
Sbjct: 118 LIGMYSDLG-------------------------------SVDYARKVFDKTRKRTIYVW 146
Query: 175 TGIIDGYTRMNRSNEALALFRKM--VACEYTEPSEITILAVLPAIWQNGD-VKSCQLIHG 231
+ T E L L+ KM + E + +L A D + + IH
Sbjct: 147 NALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTADHLTKGKEIHA 206
Query: 232 YGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGM 291
+ +RG+ + + ++ L+D YA+ GC+ AS +F + V +N+VSW+++I+ +A +G
Sbjct: 207 HLTRRGYNSH-VYIMTTLVDMYARFGCVDYASYVFNGMPV--RNVVSWSAMIACYAKNGK 263
Query: 292 GKEAVENFGRM--QKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEEC--EVLPDI 347
EA+ F M + PN VT +SVL AC+ +E+G ++ +LP I
Sbjct: 264 AFEALRTFREMMTETKDSSPNSVTMVSVLQACASLAALEQGRLIHGYILRRGLDSILPVI 323
Query: 348 KHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTL--------------------- 386
L+ M GR G+L+ ++ + DVV W +L
Sbjct: 324 ---SALVTMYGRCGKLDVGQRVFDRMHDR--DVVSWNSLISSYGVHGYGRKAIQIFEEML 378
Query: 387 --------------LGACSFHGNVEMGERVTRKILEMERGYG-----GDYVLMYNILAGV 427
LGACS G VE G+R+ M R +G Y M ++L
Sbjct: 379 ANGASPTPVTFVSVLGACSHEGLVEEGKRLFE---SMWRDHGIKPQVEHYACMVDLLGRA 435
Query: 428 GRFGDAERLRRVMDERNAFKVPGCSL 453
R +A ++ + M KV G L
Sbjct: 436 NRLDEAAKMVQDMRTEPGPKVWGSLL 461
>gi|147816693|emb|CAN62262.1| hypothetical protein VITISV_013985 [Vitis vinifera]
Length = 531
Score = 251 bits (642), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 126/384 (32%), Positives = 223/384 (58%), Gaps = 6/384 (1%)
Query: 73 DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLF 132
D++TY+F+++ C+ L G Q+H + K G +++T+L++MY L + +
Sbjct: 122 DNYTYTFVLKVCSHLKAIFEGKQVHCQVIKAGVAPDTHIHTSLIHMYAKSDCLACAEGVL 181
Query: 133 DEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALA 192
E + N++ N MI+G + G +E AR++F++M ++ +W+G+I GYT+ EAL
Sbjct: 182 AECSQENVLAINSMISGYMSQGHVEKARAMFDKMGAKDAATWSGMITGYTKNGMHEEALV 241
Query: 193 LFRKM--VACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLI 250
+FR+M V+ +P+E +++ L A G + + IH Y + G I + L+
Sbjct: 242 MFREMMMVSNSGVQPNESALVSSLSATACLGALDQGRWIHAYIRRIG-AKISITLGTGLV 300
Query: 251 DTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPN 310
D YAKCG I + KLF ++ +++++V+W ++SGFAMHG ++ + F M G +PN
Sbjct: 301 DMYAKCGSIHCSYKLFREM--QQRDVVTWGVMMSGFAMHGQARKCFQLFDEMVAGGTRPN 358
Query: 311 RVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTA 370
V F+++L+ACSH G +E G ++F++MV + + P ++HYGC++D+LGRAG+L +AE+
Sbjct: 359 EVIFVAILSACSHAGYLELGHHYFNQMVTDFGIRPSVEHYGCMVDLLGRAGQLAEAEELI 418
Query: 371 LGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRF 430
+ +P E T V+W LL AC H ++ G R R+++++E G Y L + + G
Sbjct: 419 ISMPEEPT-AVIWGALLSACRIHKDLRRGRRAFRQLMQLEPLRGDRYKLAGQMFSSAGEK 477
Query: 431 GDAERLRRVMDERNAFKVPGCSLV 454
+A+ + R + E G S +
Sbjct: 478 EEADNVTRFIKENELETTRGSSFI 501
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 68/312 (21%), Positives = 129/312 (41%), Gaps = 24/312 (7%)
Query: 95 QLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWG 154
Q+HA G + L++ YVS+ + + +F+ +P ++ +N MI GL G
Sbjct: 43 QIHAQFIVSGLLARPPNAGRLLDSYVSMSQIYYALLVFNRIPSPDVFAYNAMIRGLT-LG 101
Query: 155 ELEFARSLFEEMPCRNVVSWTGIIDGYTR---MNRSNEALALFR-KMVACEYTEPS---E 207
+ L ++ D YT + + A+F K V C+ + +
Sbjct: 102 NCPYDSLLLYNKLLLGGLT----PDNYTYTFVLKVCSHLKAIFEGKQVHCQVIKAGVAPD 157
Query: 208 ITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFE 267
I L ++ D +C G + ++ +N +I Y G + A +F+
Sbjct: 158 THIHTSLIHMYAKSDCLAC----AEGVLAECSQENVLAINSMISGYMSQGHVEKARAMFD 213
Query: 268 DISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKV---GLKPNRVTFLSVLNACSHG 324
+ K+ +W+ +I+G+ +GM +EA+ F M V G++PN +S L+A +
Sbjct: 214 KMGA--KDAATWSGMITGYTKNGMHEEALVMFREMMMVSNSGVQPNESALVSSLSATACL 271
Query: 325 GLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWR 384
G +++G + + I L+DM + G + + K L + DVV W
Sbjct: 272 GALDQG-RWIHAYIRRIGAKISITLGTGLVDMYAKCGSIHCSYK--LFREMQQRDVVTWG 328
Query: 385 TLLGACSFHGNV 396
++ + HG
Sbjct: 329 VMMSGFAMHGQA 340
>gi|297810935|ref|XP_002873351.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297319188|gb|EFH49610.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 1281
Score = 251 bits (641), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 141/421 (33%), Positives = 242/421 (57%), Gaps = 11/421 (2%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+N ++ +S +++P+K+ +Y QI SP D TY FL+++ + LS+ +G
Sbjct: 822 WNFVIRGFSNSKNPEKSIRVY---IQILRSGFSP-----DHMTYPFLLKSSSRLSNREIG 873
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
LH + K G + ++++ L++MY S + KLFDEMP +NLVTWN ++ K
Sbjct: 874 GSLHCSVVKTGLEWDLFISNTLIHMYGSFRDKASARKLFDEMPYKNLVTWNSILDSYAKS 933
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
G++ AR +F+EM R+VV+W+ +IDGY + NEAL +F +M+ ++ +E+T+++V
Sbjct: 934 GDVVSARLVFDEMTMRDVVTWSSMIDGYVKSGEYNEALEIFDQMMRMGSSKANEVTMVSV 993
Query: 214 LPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVER 273
L A G++ +++H Y + + LID YAKCG I A +F SV++
Sbjct: 994 LCACAHLGELNRGKVVHRYILDVHL-PLTVILQTSLIDMYAKCGSIGDAWGVFCGASVKK 1052
Query: 274 KNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNF 333
+ + W ++I G A HG +E++ F +M++ + P+ +TFL +L ACSHGGLV+E +F
Sbjct: 1053 TDALMWNAMIGGLASHGFIRESLLLFHKMRESEIDPDEITFLCLLAACSHGGLVKEAWHF 1112
Query: 334 FDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFH 393
F + +E P +HY C++D+L RAG ++ A + + T V+ L C H
Sbjct: 1113 FTSL-KESGAEPKSEHYACMVDVLSRAGLVKDAHDFISEMLIKPTGSVLG-ALFNGCINH 1170
Query: 394 GNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSL 453
GN+E+ E V +K++E++ G YV + N+ A +FG A +R M+++ K+ G S+
Sbjct: 1171 GNLELAETVGKKLIELQPHNDGRYVGLANVYAINKQFGAARSMREAMEKKGVKKIAGHSI 1230
Query: 454 V 454
+
Sbjct: 1231 I 1231
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 114/255 (44%), Gaps = 44/255 (17%)
Query: 104 GFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPE----RNLVTWNVMITGLVKWGELEFA 159
GF+ + T LV G D+ K D++ R++V++ I GL++ ++
Sbjct: 539 GFEPWIKHTTCLVKKLCENGKAVDACKYIDDVAGEGFLRHMVSYTAAIEGLIRNEGVDRG 598
Query: 160 RSLFEEM----PCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLP 215
LF + C +V+++ +I + R+ EA LF +MV+ + +PS T +++
Sbjct: 599 LELFRDTCANGHCPDVIAYHVLIKALCKACRTTEADNLFNEMVS-KGLKPSVATYNSMID 657
Query: 216 AIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKN 275
+ G++ R L+C++ +++ED + +
Sbjct: 658 GWCKEGEID-------------------RGLSCIV-------------RMYED--EKNPD 683
Query: 276 LVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFD 335
++++TS+I G EA+ + M+ PNR+TF++++ + G E L +F
Sbjct: 684 VITYTSLIHGLCASRRPSEAISRWNEMKGKDCYPNRITFMALIQGLCNCGWSSEALVYFR 743
Query: 336 KMVEECEVLPDIKHY 350
+M EE E+ PD Y
Sbjct: 744 EM-EEKEMEPDSAVY 757
>gi|242037817|ref|XP_002466303.1| hypothetical protein SORBIDRAFT_01g005310 [Sorghum bicolor]
gi|241920157|gb|EER93301.1| hypothetical protein SORBIDRAFT_01g005310 [Sorghum bicolor]
Length = 606
Score = 251 bits (641), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 147/423 (34%), Positives = 229/423 (54%), Gaps = 44/423 (10%)
Query: 34 FNTLLHFYSLAESPQ--KAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPN 91
+NTLL Y+ + +P +A + ++ +P D++T+ L++ CA
Sbjct: 96 YNTLLRGYARSSNPSSSEAAAAVRVFVRMLEEGVAP-----DTYTFVSLLKACAAARAGE 150
Query: 92 LGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLV 151
G Q HA+ K+G H YV L+NMY
Sbjct: 151 EGRQAHALAVKLGAADHDYVRPTLINMYA------------------------------- 179
Query: 152 KWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITIL 211
+ G+ AR +F VVS+ +I R +R EAL LFR+M + +P+ +T++
Sbjct: 180 ECGDARAARVMFGGTDGGCVVSYNAMIAAAVRSSRPGEALVLFREMQG-KGLKPTSVTVI 238
Query: 212 AVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISV 271
+VL A G ++ + +H Y K G + ++V LID YAKCG + A +F+ +
Sbjct: 239 SVLSACALLGALELGRWVHDYVRKIGLGSL-VKVSTALIDMYAKCGSLEDAIDVFQ--GM 295
Query: 272 ERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGL 331
E K+ +W+ +I +A HG G+EA+ F M+K G+KP+ +TFL VL ACSH GLV EGL
Sbjct: 296 ESKDRQAWSVMIVAYANHGYGREAISLFEEMKKEGMKPDDITFLGVLYACSHSGLVSEGL 355
Query: 332 NFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACS 391
+FD M + ++P IKHYGC+ D+L R+G+LE+A K +P T ++ WRTLL AC
Sbjct: 356 QYFDDMKDH-GIVPGIKHYGCVTDLLARSGQLERAYKFIDELPINPTPIL-WRTLLSACG 413
Query: 392 FHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGC 451
HG+ E+G+RV +IL+++ +GGDYV+ N+ A G + + +R++M E+ KVPGC
Sbjct: 414 GHGDFELGKRVFERILKLDDSHGGDYVIFSNLCANTGYWEEMNMVRKLMSEKGVVKVPGC 473
Query: 452 SLV 454
S +
Sbjct: 474 SSI 476
>gi|449448675|ref|XP_004142091.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42450,
mitochondrial-like [Cucumis sativus]
Length = 516
Score = 251 bits (641), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 134/382 (35%), Positives = 225/382 (58%), Gaps = 4/382 (1%)
Query: 73 DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLF 132
+ FT+ +I++ L ++G QLH K G S+V+V +AL+++YV +G ++++ + F
Sbjct: 94 NEFTFGTVIQSPKALGDIHIGKQLHVCAIKTGLHSNVFVGSALLDLYVKVGVIEEAQRAF 153
Query: 133 DEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALA 192
+++ N+V++ +I+G +K + A +F+EMP RNVVSW +I G+++ + +A+
Sbjct: 154 EDIKMPNVVSYTSLISGYLKIERIRDALRVFDEMPERNVVSWNSMIGGFSQKGHNEDAVH 213
Query: 193 LFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDT 252
LF M+ E P++ T + A + + H K F D+ V N LI
Sbjct: 214 LFIDMLR-EGILPTQSTFPCAICAAANIASIGIGRSFHACAVKF-FGKLDVFVSNSLISF 271
Query: 253 YAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRV 312
YAKCG + + +F + ER N+VSW +++SGFA +G GKEA++ + RM G KPN V
Sbjct: 272 YAKCGSMEDSLLVFNKLLDER-NVVSWNAVLSGFAQNGRGKEAIDFYQRMILAGCKPNAV 330
Query: 313 TFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALG 372
TFLS+L AC+H GLV+EG ++F++ + L +HY C++D+L R+G+ ++AE+
Sbjct: 331 TFLSLLWACNHAGLVDEGYSYFNQARLDNPNLLKAEHYACMVDLLSRSGQFKRAEEFIHD 390
Query: 373 IPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGD 432
+P + + W+ LLG C H NVE+GE ++IL ++ G YV+M N + G++
Sbjct: 391 LPFD-PGIGFWKALLGGCQIHSNVELGELAAQRILALDPGDVSSYVMMSNAHSAAGKWHS 449
Query: 433 AERLRRVMDERNAFKVPGCSLV 454
LRR M E+ ++PGCS +
Sbjct: 450 VSILRREMKEKGLKRIPGCSWI 471
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 102/192 (53%), Gaps = 10/192 (5%)
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
G+L+ AR L+++MP NVVS T I R ++ EAL+LF M+ P+E T V
Sbjct: 44 GQLD-ARQLYDKMPHLNVVSATTAIGRCARQHQHEEALSLFSAMLVLNL-RPNEFTFGTV 101
Query: 214 LPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVER 273
+ + GD+ + +H K G + ++ V + L+D Y K G I A + FEDI +
Sbjct: 102 IQSPKALGDIHIGKQLHVCAIKTGLHS-NVFVGSALLDLYVKVGVIEEAQRAFEDIKM-- 158
Query: 274 KNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNF 333
N+VS+TS+ISG+ ++A+ F M + N V++ S++ S G E+ ++
Sbjct: 159 PNVVSYTSLISGYLKIERIRDALRVFDEMP----ERNVVSWNSMIGGFSQKGHNEDAVHL 214
Query: 334 FDKMVEECEVLP 345
F M+ E +LP
Sbjct: 215 FIDMLREG-ILP 225
>gi|345505220|gb|AEN99834.1| chlororespiratory reduction 4 [Draba nemorosa]
Length = 612
Score = 251 bits (641), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 132/343 (38%), Positives = 207/343 (60%), Gaps = 6/343 (1%)
Query: 113 TALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVV 172
+L++ YV G ++D+ LF++MP+R++VTW M+ G K G + A+SLF+ MP R+VV
Sbjct: 256 NSLIDGYVKHGRMEDAKSLFNKMPKRDVVTWATMVDGYAKLGFVHQAKSLFDRMPLRDVV 315
Query: 173 SWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGY 232
++ +I GY + EA+ +F M + P E T++ VL AI Q G + IH Y
Sbjct: 316 AYNSMITGYVQNRYHKEAIGIFNDMEKESHLSPDETTLVIVLSAIAQLGRLSKAVDIHLY 375
Query: 233 GEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMG 292
F ++ LIDTY+KCG I + ++FE+I E K++ W ++I G A+HG+G
Sbjct: 376 IMDNKFR-LGGKLGVALIDTYSKCGSIQKSMRVFEEI--ENKSIDHWNAMIGGLAIHGLG 432
Query: 293 KEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGC 352
+ A + +++K +KP+ +TF+ VLNACSH GLV+EGL F+ M + ++ P ++HYGC
Sbjct: 433 ESAFDMLLQIEKRSIKPDDITFIGVLNACSHSGLVKEGLLCFELMRRKHKIEPKLQHYGC 492
Query: 353 LIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERG 412
++D+L R+G +E A+ +P E D V+WRT L ACS H E GE V + + ++ G
Sbjct: 493 MVDILSRSGSIELAKNLIEEMPIEPND-VIWRTFLTACSNHKEFETGELVAKHLF-LQGG 550
Query: 413 YG-GDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
Y +VL+ N+ A G + + R+R M ER K+PGCS +
Sbjct: 551 YNPSSFVLLSNMYASFGMWKEVRRVRTTMKERKLRKIPGCSWI 593
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 105/398 (26%), Positives = 197/398 (49%), Gaps = 30/398 (7%)
Query: 18 HSHLLTTNSLLHHSQLFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTY 77
H + + +N L+N ++ +S P+KA LL+ + + D F+
Sbjct: 73 HEYHVCSNGDFEDPFLWNAVIKSHSHGLDPRKALLLFCLMLETGVS--------VDKFSL 124
Query: 78 SFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPE 137
S +++ C+ L G Q+H + K G S +Y+ L+ +Y+ G L + ++FD MP
Sbjct: 125 SLVLKACSRLGFVKEGMQIHGFLRKTGIWSDLYLQNCLIGLYIKCGCLGYARQVFDRMPR 184
Query: 138 RNLVTWNVMITGLVKWGELEFARSLFEEMP--CRNVVSWTGIIDGYT-RMNRSNEALALF 194
R+ V++N MI G VK G +E AR LF+ MP +N++SW +I GY R + N A LF
Sbjct: 185 RDSVSYNSMIDGYVKCGMIESARGLFDLMPKEKKNLISWNFMISGYAQRADGVNVAKKLF 244
Query: 195 RKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYA 254
+M E I+ +++ ++G ++ + + KR D+ ++D YA
Sbjct: 245 DEM-----PEKDLISWNSLIDGYVKHGRMEDAKSLFNKMPKR-----DVVTWATMVDGYA 294
Query: 255 KCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVG-LKPNRVT 313
K G + A LF+ + + +++V++ S+I+G+ + KEA+ F M+K L P+ T
Sbjct: 295 KLGFVHQAKSLFDRMPL--RDVVAYNSMITGYVQNRYHKEAIGIFNDMEKESHLSPDETT 352
Query: 314 FLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGI 373
+ VL+A + G + + ++ +++ L K LID + G ++++ + I
Sbjct: 353 LVIVLSAIAQLGRLSKAVDIHLYIMDNKFRLGG-KLGVALIDTYSKCGSIQKSMRVFEEI 411
Query: 374 PSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMER 411
++ D W ++G + HG +GE +L++E+
Sbjct: 412 ENKSID--HWNAMIGGLAIHG---LGESAFDMLLQIEK 444
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 52/256 (20%), Positives = 104/256 (40%), Gaps = 40/256 (15%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+N+++ Y ++A ++ +++ S L P D T ++ A L +
Sbjct: 317 YNSMITGYVQNRYHKEAIGIFNDMEK-----ESHLSP--DETTLVIVLSAIAQLGRLSKA 369
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
+H I F+ + AL++ Y G ++ S ++F+E+ +++ WN MI GL
Sbjct: 370 VDIHLYIMDNKFRLGGKLGVALIDTYSKCGSIQKSMRVFEEIENKSIDHWNAMIGGLAIH 429
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
G E A + ++ R++ +P +IT + V
Sbjct: 430 GLGESAFDMLLQIEKRSI--------------------------------KPDDITFIGV 457
Query: 214 LPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVER 273
L A +G VK L ++ ++ C++D ++ G I A L E++ +E
Sbjct: 458 LNACSHSGLVKEGLLCFELMRRKHKIEPKLQHYGCMVDILSRSGSIELAKNLIEEMPIE- 516
Query: 274 KNLVSWTSIISGFAMH 289
N V W + ++ + H
Sbjct: 517 PNDVIWRTFLTACSNH 532
>gi|224097410|ref|XP_002310922.1| predicted protein [Populus trichocarpa]
gi|222850742|gb|EEE88289.1| predicted protein [Populus trichocarpa]
Length = 554
Score = 251 bits (641), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 157/465 (33%), Positives = 253/465 (54%), Gaps = 34/465 (7%)
Query: 10 PNNITTQIHSHLLTTNSLLHHSQ-----LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHS 64
P+ + H HLL+ + + Q L+N ++ ++ +++P K+ + Q+ + T S
Sbjct: 66 PSGSNSSAH-HLLSAHYVFKDIQSPSTILWNQMIRAHARSQTPAKSIQFFNQM--LLTDS 122
Query: 65 HSPLPPLFDSFTYSFLIRTCATLSHPNLGTQLHA-VISKVGFQSHVYVNTALVNMYVSL- 122
D+ TYSFL+ C + G Q+H+ V++ + S+V++ + LVN Y ++
Sbjct: 123 RP------DAHTYSFLLAACTSSLSLREGQQVHSKVLTNGYYSSNVFLMSKLVNFYAAVV 176
Query: 123 ----GFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGII 178
L + K+FD+M ERN+V WN M+ G ++ G L+ AR +F EMP RNVVSWT +I
Sbjct: 177 GGEGAALASARKVFDDMSERNVVCWNSMLAGYMRRGNLDGARRIFYEMPERNVVSWTTMI 236
Query: 179 DGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGF 238
GY + + +AL LF +M E ++ +LA L A + GD+K IH Y + F
Sbjct: 237 SGYAKNGKCKQALNLFDQMRKAG-VELDQVVLLAALTACAELGDLKMGMWIHSYIQDT-F 294
Query: 239 TAFDIRVL----NCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKE 294
+ RVL N LI YA CG I A ++F + ++ VSWTS+I+ FA G +
Sbjct: 295 VGSNQRVLVSLNNALIHMYASCGMIDEAYEVFR--WMPERSAVSWTSLITAFAKQGYAQA 352
Query: 295 AVENFGRMQKVG---LKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYG 351
+E F MQ++G +P+ +TF+ VL ACSH GLV+EG F M++ + P I+HYG
Sbjct: 353 VLEIFRSMQRLGTSEARPDGITFIGVLCACSHAGLVDEGRQLFKDMIQRWGIKPRIEHYG 412
Query: 352 CLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKIL-EME 410
C++D+L RAG L++A++ +P + + VW LLG C F+ N E+ V++K++ E +
Sbjct: 413 CMVDLLSRAGFLDEAQELIATMPVKPNN-AVWGALLGGCRFYRNAELASLVSQKLVAEPD 471
Query: 411 RGYGGDYV-LMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
Y+ L+ + A ++ D +R+ M K G S V
Sbjct: 472 PDKAAGYLSLLAQVYASAEKWQDVATVRQKMVAMGVKKPAGQSWV 516
>gi|297804280|ref|XP_002870024.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297315860|gb|EFH46283.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 871
Score = 251 bits (641), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 142/424 (33%), Positives = 228/424 (53%), Gaps = 20/424 (4%)
Query: 35 NTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLGT 94
NTLL YS A ++++++ +Y+ +I A
Sbjct: 335 NTLLDMYSKCGDLDSAKVVFREMSGRSV------------VSYTSMIAGYAREGLAGEAV 382
Query: 95 QLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNL----VTWNVMITGL 150
+L + + G VY TA++N L + ++ + + E ++ N ++
Sbjct: 383 KLFEEMEEEGISPDVYTVTAVLNCCARNRLLDEGKRVHEWIKENDMGFDIFVSNALMDMY 442
Query: 151 VKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITI 210
K G + A +F EM ++++SW +I GY++ +NEAL+LF ++ + P E T+
Sbjct: 443 AKCGSMREAELVFSEMRVKDIISWNTVIGGYSKNCYANEALSLFNLLLVEKRFSPDERTV 502
Query: 211 LAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDIS 270
VLPA + IHGY + G+ + D V N L+D YAKCG + A LF+DI+
Sbjct: 503 ACVLPACASLSAFDKGREIHGYIMRNGYFS-DRHVANSLVDMYAKCGALLLARLLFDDIT 561
Query: 271 VERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEG 330
K+LVSWT +I+G+ MHG GKEA+ F +M++ G++P+ ++F+S+L ACSH GLV+EG
Sbjct: 562 --SKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEPDEISFVSLLYACSHSGLVDEG 619
Query: 331 LNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGAC 390
FF+ M EC++ P ++HY C++DML R G L +A + +P D +W LL C
Sbjct: 620 WRFFNIMRHECKIEPTVEHYACIVDMLARTGNLSKAYRFIENMPIP-PDATIWGALLCGC 678
Query: 391 SFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPG 450
H +V++ ERV K+ E+E G YVLM NI A ++ + +RLR+ + +R K PG
Sbjct: 679 RIHHDVKLAERVAEKVFELEPENTGYYVLMANIYAEAEKWEEVKRLRKRIGQRGLRKNPG 738
Query: 451 CSLV 454
CS +
Sbjct: 739 CSWI 742
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 95/319 (29%), Positives = 162/319 (50%), Gaps = 38/319 (11%)
Query: 73 DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLF 132
DS+T+S + ++ ++L N G QLH I K GF V +LV Y+ + + K+F
Sbjct: 194 DSYTFSCVSKSFSSLRSVNGGEQLHGYILKSGFGERNSVGNSLVAFYLKNHRVDSARKVF 253
Query: 133 DEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALA 192
DEM ER++++WN +I G V G E S+F +M ++GI
Sbjct: 254 DEMTERDVISWNSIINGYVSNGLAEKGLSVFVQML------FSGI--------------- 292
Query: 193 LFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDT 252
E TI++V + + + +H +G K F+ D R N L+D
Sbjct: 293 -----------EIDLATIVSVFAGCADSRLISLGRAVHCFGVKACFSRED-RFCNTLLDM 340
Query: 253 YAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRV 312
Y+KCG + SA +F ++S +++VS+TS+I+G+A G+ EAV+ F M++ G+ P+
Sbjct: 341 YSKCGDLDSAKVVFREMS--GRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVY 398
Query: 313 TFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALG 372
T +VLN C+ L++EG + ++E ++ DI L+DM + G + +AE +
Sbjct: 399 TVTAVLNCCARNRLLDEGKRVHE-WIKENDMGFDIFVSNALMDMYAKCGSMREAE--LVF 455
Query: 373 IPSEITDVVVWRTLLGACS 391
+ D++ W T++G S
Sbjct: 456 SEMRVKDIISWNTVIGGYS 474
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/295 (24%), Positives = 131/295 (44%), Gaps = 36/295 (12%)
Query: 73 DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLF 132
D T +++ CA G ++ I GF + + L MY + G LK++S++F
Sbjct: 93 DPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVLDSNLGSKLALMYTNCGDLKEASRVF 152
Query: 133 DEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALA 192
D++ + WN+++ L K G+ + LF++M V +D YT
Sbjct: 153 DQVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVE-----MDSYT---------- 197
Query: 193 LFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDT 252
+C S + V + +HGY K GF + V N L+
Sbjct: 198 -----FSCVSKSFSSLR------------SVNGGEQLHGYILKSGFGERN-SVGNSLVAF 239
Query: 253 YAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRV 312
Y K + SA K+F++++ ++++SW SII+G+ +G+ ++ + F +M G++ +
Sbjct: 240 YLKNHRVDSARKVFDEMT--ERDVISWNSIINGYVSNGLAEKGLSVFVQMLFSGIEIDLA 297
Query: 313 TFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAE 367
T +SV C+ L+ G V+ C D + L+DM + G L+ A+
Sbjct: 298 TIVSVFAGCADSRLISLGRAVHCFGVKACFSRED-RFCNTLLDMYSKCGDLDSAK 351
>gi|297745510|emb|CBI40590.3| unnamed protein product [Vitis vinifera]
Length = 495
Score = 251 bits (641), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 159/463 (34%), Positives = 228/463 (49%), Gaps = 68/463 (14%)
Query: 12 NITTQIHSHLLTTNSLLHHSQLFNTLLHFYSLAES-------PQKAFLLYKQLQQIYTHS 64
N QI ++ L N + H QL +LL S+ + P+ LY +L Q Y+ S
Sbjct: 2 NRLKQIQAYTLR-NGIEHTKQLIVSLLQIPSIPYAHKLFDFIPKPTVFLYNKLIQAYS-S 59
Query: 65 HSPLPPLFDSFT-------------YSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYV 111
H P F +T ++FL CA+LS G LH K GF V+
Sbjct: 60 HGPHHQCFSLYTQMCLQGCSPNEHSFTFLFSACASLSSHQQGRMLHTHFVKSGFGCDVFA 119
Query: 112 NTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNV 171
TALV+MY LG L + K FDEM R++ TWN MI G + G+LE A LF MP RNV
Sbjct: 120 LTALVDMYAKLGLLSLARKQFDEMTVRDVPTWNSMIAGYARCGDLEGALELFRLMPARNV 179
Query: 172 VSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHG 231
SWT +I GY + + +AL++F M P+E+T+ +VLPA G ++ + I
Sbjct: 180 TSWTAMISGYAQNGQYAKALSMFLMMEEETEMRPNEVTLASVLPACANLGALEVGERIEV 239
Query: 232 YGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGM 291
Y G+ ++ V N L++ YA+CG I A +FE+I R+NL SW S+I G A+HG
Sbjct: 240 YARGNGYFK-NLYVSNALLEMYARCGRIDKAWGVFEEID-GRRNLCSWNSMIMGLAVHGR 297
Query: 292 GKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYG 351
EA+E F +M + G P+ VTF+ VL AC+HGG+V EG +FF+ M + + P ++HYG
Sbjct: 298 CDEAIELFYKMLREGAAPDDVTFVGVLLACTHGGMVVEGQHFFESMERDFSIAPKLEHYG 357
Query: 352 CLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMER 411
C++D+LG + E+E
Sbjct: 358 CMVDLLGPGA--------------------------------------------LFELEP 373
Query: 412 GYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
G+YV++ NI A GR+ RLR++M K G S +
Sbjct: 374 SNPGNYVILSNIYATAGRWDGVARLRKLMKGGKITKAAGYSFI 416
>gi|356498922|ref|XP_003518295.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g14470-like [Glycine max]
Length = 682
Score = 251 bits (640), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 138/420 (32%), Positives = 241/420 (57%), Gaps = 26/420 (6%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+N +L Y+ + + Q+ L+ + + + P D T+ ++ +C++L P L
Sbjct: 232 WNAMLSGYAQSGAAQETVRLFDDM---LSSGNEP-----DETTWVTVLSSCSSLGDPCLA 283
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMP-ERNLVTWNVMITGLVK 152
+ + ++ F+S+ +V TAL++M+ G L+ + K+F+++ +N VTWN MI+ +
Sbjct: 284 ESIVRKLDRMNFRSNYFVKTALLDMHAKCGNLEVAQKIFEQLGVYKNSVTWNAMISAYAR 343
Query: 153 WGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILA 212
G+L AR LF +MP RN VSW +I GY + S +A+ LF++M++ + ++P E+T+++
Sbjct: 344 VGDLSLARDLFNKMPERNTVSWNSMIAGYAQNGESLKAIQLFKEMISSKDSKPDEVTMVS 403
Query: 213 VLPAIWQNGDVK----SCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFED 268
V A G + + ++H K + + N LI Y +CG + A F++
Sbjct: 404 VFSACGHLGRLGLGNWAVSILHENHIKLSISGY-----NSLIFMYLRCGSMEDARITFQE 458
Query: 269 ISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVE 328
++ K+LVS+ ++ISG A HG G E+++ +M++ G+ P+R+T++ VL ACSH GL+E
Sbjct: 459 MAT--KDLVSYNTLISGLAAHGHGTESIKLMSKMKEDGIGPDRITYIGVLTACSHAGLLE 516
Query: 329 EGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLG 388
EG F+ + +PD+ HY C+IDMLGR G+LE+A K +P E ++ +LL
Sbjct: 517 EGWKVFESI-----KVPDVDHYACMIDMLGRVGKLEEAVKLIQSMPME-PHAGIYGSLLN 570
Query: 389 ACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKV 448
A S H VE+GE K+ ++E G+YVL+ NI A GR+ D +++R M ++ K
Sbjct: 571 ATSIHKQVELGELAAAKLFKVEPHNSGNYVLLSNIYALAGRWKDVDKVRDKMRKQGVKKT 630
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 140/506 (27%), Positives = 220/506 (43%), Gaps = 92/506 (18%)
Query: 9 TPNNITTQIHSHLLTTNSLLHHSQLFNTLLHFYS-LAESPQKAFLLYKQLQQIYTHSHSP 67
P+N T+ I N +F +L +YS + + Q L+K +Q Y + P
Sbjct: 50 APSNYTSHIFRAATYPNV-----HVFTCMLKYYSQIGATTQVVVSLFKHMQ--YYNDIKP 102
Query: 68 LPPLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKD 127
+ SF Y LI++ G LHA + K+G +V A++ +Y G ++
Sbjct: 103 ----YTSF-YPVLIKSAG-----KAGMLLHAYLLKLGHSHDHHVRNAIMGIYAKYGCIEL 152
Query: 128 SSKLFDEMPER---------------------------------NLVTWNVMITGLVKWG 154
+ KLFDEMP+R N++TW M+TG K
Sbjct: 153 ARKLFDEMPDRTAADWNVIISGYWKCGNEKEATRLFCMMGESEKNVITWTTMVTGHAKMR 212
Query: 155 ELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVL 214
LE AR F+EMP R V SW ++ GY + + E + LF M++ EP E T + VL
Sbjct: 213 NLETARMYFDEMPERRVASWNAMLSGYAQSGAAQETVRLFDDMLSSG-NEPDETTWVTVL 271
Query: 215 PAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFE------- 267
+ GD + I ++ F + + V L+D +AKCG + A K+FE
Sbjct: 272 SSCSSLGDPCLAESIVRKLDRMNFRS-NYFVKTALLDMHAKCGNLEVAQKIFEQLGVYKN 330
Query: 268 ---------------DISVER--------KNLVSWTSIISGFAMHGMGKEAVENFGRM-Q 303
D+S+ R +N VSW S+I+G+A +G +A++ F M
Sbjct: 331 SVTWNAMISAYARVGDLSLARDLFNKMPERNTVSWNSMIAGYAQNGESLKAIQLFKEMIS 390
Query: 304 KVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRL 363
KP+ VT +SV +AC H G + G N+ ++ E + I Y LI M R G +
Sbjct: 391 SKDSKPDEVTMVSVFSACGHLGRLGLG-NWAVSILHENHIKLSISGYNSLIFMYLRCGSM 449
Query: 364 EQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNI 423
E A T + ++ D+V + TL+ + HG+ ++ K+ E G G D + +
Sbjct: 450 EDARITFQEMATK--DLVSYNTLISGLAAHGHGTESIKLMSKM--KEDGIGPDRITYIGV 505
Query: 424 LAGVGRFGDAERLRRVMDERNAFKVP 449
L G E +V + + KVP
Sbjct: 506 LTACSHAGLLEEGWKVFE---SIKVP 528
>gi|449523361|ref|XP_004168692.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42450,
mitochondrial-like [Cucumis sativus]
Length = 516
Score = 251 bits (640), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 133/382 (34%), Positives = 225/382 (58%), Gaps = 4/382 (1%)
Query: 73 DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLF 132
+ FT+ +I++ L ++G QLH K G S+++V +AL+++YV +G ++++ + F
Sbjct: 94 NEFTFGTVIQSAKALGDIHIGKQLHVCAIKTGLHSNLFVGSALLDLYVKVGVIEEAQRAF 153
Query: 133 DEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALA 192
+++ N+V++ +I+G +K + A +F+EMP RNVVSW +I G+++ + +A+
Sbjct: 154 EDIKMPNVVSYTSLISGYLKIERIRDALRVFDEMPERNVVSWNSMIGGFSQKGHNEDAVH 213
Query: 193 LFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDT 252
LF M+ E P++ T + A + + H K F D+ V N LI
Sbjct: 214 LFIDMLR-EGILPTQSTFPCAICAAANIASIGIGRSFHACAVKF-FGKLDVFVSNSLISF 271
Query: 253 YAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRV 312
YAKCG + + +F + ER N+VSW +++SGFA +G GKEA++ + RM G KPN V
Sbjct: 272 YAKCGSMEDSLLVFNKLLDER-NVVSWNAVLSGFAQNGRGKEAIDFYQRMILAGCKPNAV 330
Query: 313 TFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALG 372
TFLS+L AC+H GLV+EG ++F++ + L +HY C++D+L R+G+ ++AE+
Sbjct: 331 TFLSLLWACNHAGLVDEGYSYFNQARLDNPNLLKAEHYACMVDLLSRSGQFKRAEEFIHD 390
Query: 373 IPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGD 432
+P + + W+ LLG C H NVE+GE ++IL ++ G YV+M N + G++
Sbjct: 391 LPFD-PGIGFWKALLGGCQIHSNVELGELAAQRILALDPGDVSSYVMMSNAHSAAGKWHS 449
Query: 433 AERLRRVMDERNAFKVPGCSLV 454
LRR M E+ ++PGCS +
Sbjct: 450 VSILRREMKEKGLKRIPGCSWI 471
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 102/192 (53%), Gaps = 10/192 (5%)
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
G+L+ AR L++++P NVVS T I R ++ EAL+LF M+ P+E T V
Sbjct: 44 GQLD-ARQLYDKLPHLNVVSATTAIGRCARQHQHEEALSLFSAMLVLNL-RPNEFTFGTV 101
Query: 214 LPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVER 273
+ + GD+ + +H K G + ++ V + L+D Y K G I A + FEDI +
Sbjct: 102 IQSAKALGDIHIGKQLHVCAIKTGLHS-NLFVGSALLDLYVKVGVIEEAQRAFEDIKM-- 158
Query: 274 KNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNF 333
N+VS+TS+ISG+ ++A+ F M + N V++ S++ S G E+ ++
Sbjct: 159 PNVVSYTSLISGYLKIERIRDALRVFDEMP----ERNVVSWNSMIGGFSQKGHNEDAVHL 214
Query: 334 FDKMVEECEVLP 345
F M+ E +LP
Sbjct: 215 FIDMLREG-ILP 225
>gi|115476560|ref|NP_001061876.1| Os08g0434000 [Oryza sativa Japonica Group]
gi|42407498|dbj|BAD10615.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|42409483|dbj|BAD09839.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113623845|dbj|BAF23790.1| Os08g0434000 [Oryza sativa Japonica Group]
Length = 601
Score = 251 bits (640), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 135/383 (35%), Positives = 209/383 (54%), Gaps = 38/383 (9%)
Query: 73 DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLF 132
++F+ S ++ C L+H QLHA + G + T+LV+ Y + G + K+F
Sbjct: 127 NAFSLSIVLGHCRALAH---ARQLHANVVAEGHSPDALLATSLVSSYAACGDGDSARKVF 183
Query: 133 DEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALA 192
DEMP R+ + WNV+IT C YTR R+ +AL
Sbjct: 184 DEMPVRDTIAWNVLIT-------------------C------------YTRNRRTKDALK 212
Query: 193 LFRKMVACEY-TEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLID 251
LF M E EP ++T + +L A G + + + Y G+ +++V N LI
Sbjct: 213 LFDAMRGGENGAEPDDVTCILLLQACTSLGALDFGEKVWEYAVDHGYGG-ELKVRNSLIT 271
Query: 252 TYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNR 311
Y KCGC+ A ++F +K++V+W+++ISG A +G GK+A+ F M + G+ P+
Sbjct: 272 MYTKCGCVDKAYQVF--CETPKKSVVTWSAMISGLASNGFGKDAISAFEEMGRSGVAPDE 329
Query: 312 VTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTAL 371
TF VL+ACSH GLV+EG FFD M E ++ P++ HYGC++D++GRAG L+QA + +
Sbjct: 330 QTFTGVLSACSHSGLVDEGFKFFDIMCYEYQLKPNVHHYGCMVDLMGRAGLLDQAYELVV 389
Query: 372 GIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFG 431
D +WRTLLGAC HG++++GERV ++E++ GDYVL+ N A V +G
Sbjct: 390 KDMRVAPDATIWRTLLGACRIHGHIDLGERVINHLIELKAQQAGDYVLLLNTYAAVEDWG 449
Query: 432 DAERLRRVMDERNAFKVPGCSLV 454
+R++M E+ PGC+ V
Sbjct: 450 KVAEVRKLMKEKGIQTTPGCTTV 472
>gi|326528029|dbj|BAJ89066.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 639
Score = 251 bits (640), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 155/483 (32%), Positives = 237/483 (49%), Gaps = 77/483 (15%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNL 92
L NTLL Y+L P A L+ + P DSFTYSFLI+ ++ L
Sbjct: 125 LPNTLLRAYALNALPHAAVSLFSAM------------PQRDSFTYSFLIKALSSSGLTPL 172
Query: 93 GTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVK 152
+H+ + K+G YV AL++ Y G D+SK+F+EMP R+ V+WN + +V+
Sbjct: 173 -RAVHSHVVKLGSIEDTYVGNALIDAYSKNGGFLDASKVFEEMPRRDTVSWNSAMAAMVR 231
Query: 153 WGELEFARSLFEEMP----------------------------C---RNVVSWTGIIDGY 181
GE+ AR +F+EMP C RNVVSW+ ++ GY
Sbjct: 232 QGEVASARRMFDEMPDKDTVSWNTVLDGYTKAGKMEDAFELFQCMPERNVVSWSTVVSGY 291
Query: 182 TRMNRSNEALALFRKM------------VACE-----------YTEPSEITI-------L 211
+ A +F KM AC +T+ E + +
Sbjct: 292 CKKGDIEMARVIFDKMPTKNLVTWTIMVSACAQNGLVEEAGRLFTQMKEAAVELDVAAVV 351
Query: 212 AVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISV 271
++L A ++G + + IH Y R V N +ID + KCGC+ A +F D +
Sbjct: 352 SILAACAESGSLALGKRIHRYVRTRQL-GRSTHVCNAMIDMFCKCGCVNRADYVF-DTEI 409
Query: 272 ERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGL 331
K+ VSW +II GFAMHG G +A++ F +M+ G +P+ VT ++VL+AC+H G VEEG
Sbjct: 410 AEKDSVSWNTIIGGFAMHGHGDKALDFFAQMKLQGFRPDAVTMINVLSACTHMGFVEEGR 469
Query: 332 NFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACS 391
F M + ++P I+HYGC+ID+LGR G +E+A +P + + V+W +LL AC
Sbjct: 470 QHFSNMERDYGIVPQIEHYGCMIDLLGRGGLIEEAVGLIKSMPWDPNE-VIWGSLLSACR 528
Query: 392 FHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGC 451
H NVE E ++ +++ G+Y ++ NI A G++ D + R M + K G
Sbjct: 529 LHKNVEYAEIAVNELSKLQPSNAGNYAVLSNIYAEAGQWSDMAKARMQMKGTGSQKSAGS 588
Query: 452 SLV 454
S +
Sbjct: 589 SWI 591
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 92/425 (21%), Positives = 165/425 (38%), Gaps = 95/425 (22%)
Query: 87 LSHPNLGTQLHAVISKVGF---------------------------------QSHVYVNT 113
L H + +LHA + K G Q+ ++
Sbjct: 68 LQHLHHVQELHAQLLKHGLHLDPLAASKLISSYALQRRLPASRRIFASFPNPQATTFLPN 127
Query: 114 ALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGL---------------VKWGELE- 157
L+ Y + LF MP+R+ T++ +I L VK G +E
Sbjct: 128 TLLRAYALNALPHAAVSLFSAMPQRDSFTYSFLIKALSSSGLTPLRAVHSHVVKLGSIED 187
Query: 158 ------------------FARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVA 199
A +FEEMP R+ VSW + R A +F +M
Sbjct: 188 TYVGNALIDAYSKNGGFLDASKVFEEMPRRDTVSWNSAMAAMVRQGEVASARRMFDEM-- 245
Query: 200 CEYTEPSEITILAVLPAIWQ---NGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKC 256
P + T+ W +G K+ ++ + + ++ + ++ Y K
Sbjct: 246 -----PDKDTV------SWNTVLDGYTKAGKMEDAFELFQCMPERNVVSWSTVVSGYCKK 294
Query: 257 GCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLS 316
G I A +F+ + KNLV+WT ++S A +G+ +EA F +M++ ++ + +S
Sbjct: 295 GDIEMARVIFDKMPT--KNLVTWTIMVSACAQNGLVEEAGRLFTQMKEAAVELDVAAVVS 352
Query: 317 VLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSE 376
+L AC+ G + G + V ++ +IDM + G + +A+ +E
Sbjct: 353 ILAACAESGSLALGKRIH-RYVRTRQLGRSTHVCNAMIDMFCKCGCVNRADYV---FDTE 408
Query: 377 IT--DVVVWRTLLGACSFHGNVEMGERVTRKILEME-RGYGGDYVLMYNILAGVGRFGDA 433
I D V W T++G + HG+ G++ +M+ +G+ D V M N+L+ G
Sbjct: 409 IAEKDSVSWNTIIGGFAMHGH---GDKALDFFAQMKLQGFRPDAVTMINVLSACTHMGFV 465
Query: 434 ERLRR 438
E R+
Sbjct: 466 EEGRQ 470
>gi|357464699|ref|XP_003602631.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355491679|gb|AES72882.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 705
Score = 251 bits (640), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 148/388 (38%), Positives = 220/388 (56%), Gaps = 10/388 (2%)
Query: 73 DSFTYSFLIRTCATLSHPNLGTQLHA-VISKVGFQSHVYVNTALVNMYVSLGFLKDSSKL 131
D T + + CA+LS G Q+HA V+ +++ + + ALV+MY + ++ +
Sbjct: 251 DEITLASVASACASLSAIREGLQIHARVMKHDKYRNDLVLGNALVDMYAKCRRVNEARLV 310
Query: 132 FDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEAL 191
FD MP R++V+ M++G K ++ AR +F M RNVVSW +I GYT+ + EA+
Sbjct: 311 FDRMPLRDVVSETSMVSGYAKASSVKAARLMFSNMMERNVVSWNALIAGYTQNGENEEAV 370
Query: 192 ALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGF-----TAFDIRVL 246
LF ++ E P+ T +L A D+K + H + K GF DI V
Sbjct: 371 RLFL-LLKRESIWPTHYTFGNLLNACANLADLKLGRQAHTHILKHGFWFKSGEDSDIFVG 429
Query: 247 NCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVG 306
N LID Y KCG + +FE + +ER N VSW ++I G+A +G G EA+E F M G
Sbjct: 430 NSLIDMYMKCGLVEDGRLVFERM-LERDN-VSWNAMIVGYAQNGYGTEALEIFREMLVSG 487
Query: 307 LKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQA 366
+P+ VT + VL+ACSH GLVEEG +F M E ++P HY C++D+LGRAG L++A
Sbjct: 488 ERPDHVTMIGVLSACSHAGLVEEGRCYFQSMTIEHGLVPVKDHYTCMVDLLGRAGCLDEA 547
Query: 367 EKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAG 426
+P E D VVW +LL AC HGN+ +G+ V ++LE++ G YVL+ N+ A
Sbjct: 548 NNLIQTMPME-PDAVVWGSLLAACKVHGNITLGKYVAERLLEIDPLNSGPYVLLSNMYAE 606
Query: 427 VGRFGDAERLRRVMDERNAFKVPGCSLV 454
+GR+ D R+R+ M + K PGCS +
Sbjct: 607 LGRWKDVVRVRKQMRQMGVIKQPGCSWI 634
Score = 161 bits (407), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 104/370 (28%), Positives = 191/370 (51%), Gaps = 14/370 (3%)
Query: 71 LFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSK 130
DS ++ L+ TC +HA I K F S +++ LV++Y GFL+D+ K
Sbjct: 16 FLDSSPFAKLLDTCVKSKSVFEARLVHARIIKTQFSSEIFIQNRLVDVYGKCGFLEDARK 75
Query: 131 LFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEA 190
+FD M +RN +WN ++ L K+G L+ A +LF+ MP R+ SW ++ G+ + +R EA
Sbjct: 76 VFDHMQQRNTFSWNAVLGALTKFGALDEALNLFKCMPERDQCSWNAMVSGFAQRDRFEEA 135
Query: 191 LALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLI 250
L M + ++ +E + + L A D+ IHG K ++ D+ + + L+
Sbjct: 136 LRFVVDMHSEDFV-LNEYSFGSALSACAGLMDLSIGVQIHGLIAKSRYS-LDVYMGSALV 193
Query: 251 DTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPN 310
D Y+KC + SA + F+D+ V +N+VSW S+I+ + +G +A+E F RM G++P+
Sbjct: 194 DMYSKCRVVASAQRAFDDMDV--RNIVSWNSLITCYEQNGPAGKALEVFVRMMNCGIEPD 251
Query: 311 RVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTA 370
+T SV +AC+ + EGL ++++ + D+ L+DM + R+ +A
Sbjct: 252 EITLASVASACASLSAIREGLQIHARVMKHDKYRNDLVLGNALVDMYAKCRRVNEARLVF 311
Query: 371 LGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYN-ILAGVGR 429
+P + DVV +++ + +V+ + ++E V+ +N ++AG +
Sbjct: 312 DRMP--LRDVVSETSMVSGYAKASSVKAARLMFSNMMERN-------VVSWNALIAGYTQ 362
Query: 430 FGDAERLRRV 439
G+ E R+
Sbjct: 363 NGENEEAVRL 372
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 107/445 (24%), Positives = 180/445 (40%), Gaps = 113/445 (25%)
Query: 71 LFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSK 130
+ + +++ + CA L ++G Q+H +I+K + VY+ +ALV+MY + + +
Sbjct: 148 VLNEYSFGSALSACAGLMDLSIGVQIHGLIAKSRYSLDVYMGSALVDMYSKCRVVASAQR 207
Query: 131 LFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEA 190
FD+M RN+V+WN +IT C Y + + +A
Sbjct: 208 AFDDMDVRNIVSWNSLIT-------------------C------------YEQNGPAGKA 236
Query: 191 LALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLI 250
L +F +M+ C EP EIT+ +V A ++ IH K D+ + N L+
Sbjct: 237 LEVFVRMMNCG-IEPDEITLASVASACASLSAIREGLQIHARVMKHDKYRNDLVLGNALV 295
Query: 251 DTYAKCGCIFSASKLFE-----DISVE------------------------RKNLVSWTS 281
D YAKC + A +F+ D+ E +N+VSW +
Sbjct: 296 DMYAKCRRVNEARLVFDRMPLRDVVSETSMVSGYAKASSVKAARLMFSNMMERNVVSWNA 355
Query: 282 IISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACS-----------------HG 324
+I+G+ +G +EAV F +++ + P TF ++LNAC+ HG
Sbjct: 356 LIAGYTQNGENEEAVRLFLLLKRESIWPTHYTFGNLLNACANLADLKLGRQAHTHILKHG 415
Query: 325 ------------------------GLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRA 360
GLVE+G F++M+E D + +I +
Sbjct: 416 FWFKSGEDSDIFVGNSLIDMYMKCGLVEDGRLVFERMLER-----DNVSWNAMIVGYAQN 470
Query: 361 GRLEQAEKT--ALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERG---YGG 415
G +A + + + E D V +L ACS G VE G R + + +E G
Sbjct: 471 GYGTEALEIFREMLVSGERPDHVTMIGVLSACSHAGLVEEG-RCYFQSMTIEHGLVPVKD 529
Query: 416 DYVLMYNILAGVGRFGDAERLRRVM 440
Y M ++L G +A L + M
Sbjct: 530 HYTCMVDLLGRAGCLDEANNLIQTM 554
>gi|225452922|ref|XP_002278886.1| PREDICTED: pentatricopeptide repeat-containing protein At3g29230
[Vitis vinifera]
Length = 594
Score = 251 bits (640), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 153/485 (31%), Positives = 247/485 (50%), Gaps = 75/485 (15%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNL 92
L+NTL+ + P AF ++ ++Q + D+FTY FL++ C+ +
Sbjct: 82 LYNTLIRAHVRNSEPLLAFSVFFEMQDSGVCA--------DNFTYPFLLKACSGKVWVRV 133
Query: 93 GTQLHAVISKVGFQSHVYVNTALVNMY--------------------------------- 119
+HA + K+GF ++V +L++ Y
Sbjct: 134 VEMIHAQVEKMGFCLDIFVPNSLIDSYFKCGLDGVAAARKVFEVMAERDTVSWNSMIGGL 193
Query: 120 VSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIID 179
V +G L ++ +LFDEMPER+ V+WN ++ G VK GE+ A LFE+MP RNVVSW+ ++
Sbjct: 194 VKVGELGEARRLFDEMPERDTVSWNTILDGYVKAGEMNAAFELFEKMPARNVVSWSTMVL 253
Query: 180 GYTRMNRSNEALALFRKM----------VACEYTEP--------------------SEIT 209
GY++ + A LF KM + Y E + T
Sbjct: 254 GYSKAGDMDMARILFDKMPVKNLVPWTIMISGYAEKGLAKDAINLYNQMEEAGLKFDDGT 313
Query: 210 ILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDI 269
++++L A +G + + +H E+ F V N LID YAKCG + +A +F +
Sbjct: 314 VISILSACAVSGLLGLGKRVHASIERTRFKC-STPVSNALIDMYAKCGSLENALSIFHGM 372
Query: 270 SVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEE 329
RK++VSW +II G AMHG G++A++ F RM+ G P++VTF+ VL AC+H G V+E
Sbjct: 373 V--RKDVVSWNAIIQGLAMHGHGEKALQLFSRMKGEGFVPDKVTFVGVLCACTHAGFVDE 430
Query: 330 GLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGA 389
GL++F M + V P+++HYGC++D+LGR GRL++A + +P E + ++W TLLGA
Sbjct: 431 GLHYFHAMERDYGVPPEVEHYGCMVDLLGRGGRLKEAFRLVHSMPLE-PNAIIWGTLLGA 489
Query: 390 CSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVP 449
C H + E V ++++ E G+ ++ NI A G + + +R M + K
Sbjct: 490 CRMHSATGLAEEVFDRLVKSELSDSGNLSMLSNIYAAAGDWDNFANIRLRMKSTSIQKPS 549
Query: 450 GCSLV 454
G S +
Sbjct: 550 GGSSI 554
>gi|356502400|ref|XP_003520007.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like [Glycine max]
Length = 591
Score = 251 bits (640), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 146/423 (34%), Positives = 235/423 (55%), Gaps = 14/423 (3%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+N ++ Y + ++A +Y+++Q S P + T + CA L + LG
Sbjct: 177 WNIMISGYVRCKRFEEAVDVYRRMQM-----ESNEKP--NEATVVSTLSACAVLRNLELG 229
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
++H I+ + + N AL++MY G + + ++FD M +N+ W M+TG V
Sbjct: 230 KEIHDYIANELDLTPIMGN-ALLDMYCKCGCVSVAREIFDAMIVKNVNCWTSMVTGYVIC 288
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
G+L+ AR LFE P R+VV WT +I+GY + N +A+ALF +M EP + ++ +
Sbjct: 289 GQLDQARYLFERSPSRDVVLWTAMINGYVQFNHFEDAIALFGEM-QIRGVEPDKFIVVTL 347
Query: 214 LPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVER 273
L Q G ++ + IH Y ++ D V LI+ YAKCGCI + ++F ++
Sbjct: 348 LTGCAQLGALEQGKWIHNYIDENRIK-MDAVVSTALIEMYAKCGCIEKSLEIFN--GLKD 404
Query: 274 KNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNF 333
+ SWTSII G AM+G EA+E F MQ GLKP+ +TF++VL+AC H GLVEEG
Sbjct: 405 MDTTSWTSIICGLAMNGKTSEALELFEAMQTCGLKPDDITFVAVLSACGHAGLVEEGRKL 464
Query: 334 FDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVV--WRTLLGACS 391
F M + P+++HYGC ID+LGRAG L++AE+ +P + +++V + LL AC
Sbjct: 465 FHSMSSIYHIEPNLEHYGCFIDLLGRAGLLQEAEELVKKLPDQNNEIIVPLYGALLSACR 524
Query: 392 FHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGC 451
+GN++MGER+ + +++ + L+ +I A R+ D ++R M + KVPG
Sbjct: 525 TYGNIDMGERLATALAKVKSSDSSLHTLLASIYASADRWEDVRKVRSKMKDLGIKKVPGY 584
Query: 452 SLV 454
S +
Sbjct: 585 SAI 587
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 103/450 (22%), Positives = 201/450 (44%), Gaps = 91/450 (20%)
Query: 28 LHHSQLF--NTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCA 85
+HH LF N ++ + S + A L++QL++ P D++TY ++++
Sbjct: 68 IHHPSLFIYNLMIKAFVKRGSLRSAISLFQQLRE-----RGVWP---DNYTYPYVLKGIG 119
Query: 86 TLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNV 145
+ G ++HA + K G + YV +L++MY LG ++ +++F+EMPER+ V+WN+
Sbjct: 120 CIGEVREGEKIHAFVVKTGLEFDPYVCNSLMDMYAELGLVEGFTQVFEEMPERDAVSWNI 179
Query: 146 MITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEP 205
MI+ GY R R EA+ ++R+M +P
Sbjct: 180 MIS-------------------------------GYVRCKRFEEAVDVYRRMQMESNEKP 208
Query: 206 SEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVL--NCLIDTYAKCGCIFSAS 263
+E T+++ L A +++ + IH Y D+ + N L+D Y KCGC+ A
Sbjct: 209 NEATVVSTLSACAVLRNLELGKEIHDYIANE----LDLTPIMGNALLDMYCKCGCVSVAR 264
Query: 264 KLFEDISVER-----------------------------KNLVSWTSIISGFAMHGMGKE 294
++F+ + V+ +++V WT++I+G+ ++
Sbjct: 265 EIFDAMIVKNVNCWTSMVTGYVICGQLDQARYLFERSPSRDVVLWTAMINGYVQFNHFED 324
Query: 295 AVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLI 354
A+ FG MQ G++P++ +++L C+ G +E+G + ++E + D LI
Sbjct: 325 AIALFGEMQIRGVEPDKFIVVTLLTGCAQLGALEQG-KWIHNYIDENRIKMDAVVSTALI 383
Query: 355 DMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMER--- 411
+M + G +E++ + G+ D W +++ + +G T + LE+
Sbjct: 384 EMYAKCGCIEKSLEIFNGLKD--MDTTSWTSIICGLAMNGK-------TSEALELFEAMQ 434
Query: 412 --GYGGDYVLMYNILAGVGRFGDAERLRRV 439
G D + +L+ G G E R++
Sbjct: 435 TCGLKPDDITFVAVLSACGHAGLVEEGRKL 464
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 94/362 (25%), Positives = 160/362 (44%), Gaps = 51/362 (14%)
Query: 76 TYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALV--NMYVSLGFLKDSSKLFD 133
TY L+++C ++S Q+ A I G Q + L+ +M SLG ++++F+
Sbjct: 10 TYISLLKSCKSMSQLK---QIQAHIFCFGLQQDRDILNKLMAFSMDSSLGDFNYANRIFN 66
Query: 134 EMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALAL 193
+ +L +N+MI VK G L A SLF+++ R V W
Sbjct: 67 HIHHPSLFIYNLMIKAFVKRGSLRSAISLFQQLRERGV--W------------------- 105
Query: 194 FRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTY 253
P T VL I G+V+ + IH + K G FD V N L+D Y
Sbjct: 106 -----------PDNYTYPYVLKGIGCIGEVREGEKIHAFVVKTGLE-FDPYVCNSLMDMY 153
Query: 254 AKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQ-KVGLKPNRV 312
A+ G + +++FE++ ++ VSW +ISG+ +EAV+ + RMQ + KPN
Sbjct: 154 AELGLVEGFTQVFEEMP--ERDAVSWNIMISGYVRCKRFEEAVDVYRRMQMESNEKPNEA 211
Query: 313 TFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALG 372
T +S L+AC+ +E G D + E ++ P + + L+DM + G + A +
Sbjct: 212 TVVSTLSACAVLRNLELGKEIHDYIANELDLTPIMGN--ALLDMYCKCGCVSVAREIFDA 269
Query: 373 IPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGD 432
+ + +V W +++ G ++ + ER D VL ++ G +F
Sbjct: 270 MI--VKNVNCWTSMVTGYVICGQLDQARYL------FERSPSRDVVLWTAMINGYVQFNH 321
Query: 433 AE 434
E
Sbjct: 322 FE 323
>gi|347954508|gb|AEP33754.1| chloroplast biogenesis 19, partial [Nasturtium officinale]
Length = 447
Score = 251 bits (640), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 141/383 (36%), Positives = 219/383 (57%), Gaps = 9/383 (2%)
Query: 76 TYSFLIRTCATLSHPN--LGTQLHAVISKVGF-QSHVYVNTALVNMYVSLGFLKDSSKLF 132
T+ L+ C + LG LH K+G ++HV V TA++ MY G + + +F
Sbjct: 20 TFIALLSGCGDFPSGSEALGDLLHGYACKLGLDRTHVMVGTAILGMYSKRGRFRKARLIF 79
Query: 133 DEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALA 192
D M ++N VTWN MI G ++ G++ A LF+EM R+++SWT +++G+ + EAL+
Sbjct: 80 DYMEDKNSVTWNTMIDGYMRSGQVNTAVKLFDEMLNRDLISWTAMVNGFVKKGFHEEALS 139
Query: 193 LFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDT 252
FR+M +P + I+A L A G + IH Y + F ++RV N LID
Sbjct: 140 WFREM-QISGVKPDYVAIIAALAACTNLGALSFGLWIHRYVMSQDFKN-NVRVSNSLIDL 197
Query: 253 YAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRV 312
Y +CGC+ A ++F+ + E++ +VSW S+I GFA +G E++ F +MQ+ G KP+ V
Sbjct: 198 YCRCGCVEFARQVFDKM--EKRTVVSWNSVIVGFAANGNAHESLFYFRKMQEEGFKPDAV 255
Query: 313 TFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALG 372
TF L ACSH GLVEEGL +F M + + P I+HYGC++D+ RAGRLE A K
Sbjct: 256 TFTGALTACSHVGLVEEGLRYFQTMKRDYRISPRIEHYGCIVDLYSRAGRLEDALKVVQS 315
Query: 373 IPSEITDVVVWRTLLGACSFHG-NVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFG 431
+P + +VV+ +LL AC HG N + ER+ + + ++ +YV++ N+ A G++
Sbjct: 316 MPMKPNEVVIG-SLLAACKNHGNNTLLAERLMKHLSDLNVKSHSNYVILSNMYAADGKWE 374
Query: 432 DAERLRRVMDERNAFKVPGCSLV 454
A ++RR M K PG S +
Sbjct: 375 GASKMRRKMKGLGLKKQPGFSSI 397
>gi|356513796|ref|XP_003525595.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Glycine max]
Length = 595
Score = 250 bits (639), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 155/495 (31%), Positives = 247/495 (49%), Gaps = 81/495 (16%)
Query: 28 LHHSQLF--NTLLHFYSLAESPQKAFLLY--KQLQQIYTHSHSPLPPLFDSFTYSFLIRT 83
LHH F NT++ Y+ A Y K L + +PP + +T+ LI+
Sbjct: 66 LHHPDAFHCNTIIRAYARKPDFPAALRFYYCKMLAR-------SVPP--NHYTFPLLIKV 116
Query: 84 CATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLG-------------------- 123
C + G + HA I K GF S ++ +L+ MY G
Sbjct: 117 CTDIGSFREGLKGHARIVKFGFGSDLFARNSLIRMYSVFGRIGNARMVFDESCWLDLVSY 176
Query: 124 ------FLKD-----SSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVV 172
++K+ + K+F+EMP+R++++WN +I G V G+L+ A LFE +P R+ V
Sbjct: 177 NSMIDGYVKNGEIGAARKVFNEMPDRDVLSWNCLIAGYVGVGDLDAANELFETIPERDAV 236
Query: 173 SWTGIIDG---------------------------------YTRMNRSNEALALFRKMVA 199
SW +IDG + R+ E L LF KMV
Sbjct: 237 SWNCMIDGCARVGNVSLAVKFFDRMPAAVRNVVSWNSVLALHARVKNYGECLMLFGKMVE 296
Query: 200 CEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCI 259
P+E T+++VL A G + +H + D+ +L CL+ YAKCG +
Sbjct: 297 GREAVPNEATLVSVLTACANLGKLSMGMWVHSFIRSNNIKP-DVLLLTCLLTMYAKCGAM 355
Query: 260 FSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLN 319
A +F+++ V +++VSW S+I G+ +HG+G +A+E F M+K G +PN TF+SVL+
Sbjct: 356 DLAKGVFDEMPV--RSVVSWNSMIMGYGLHGIGDKALELFLEMEKAGQQPNDATFISVLS 413
Query: 320 ACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITD 379
AC+H G+V EG +FD M ++ P ++HYGC++D+L RAG +E +E+ +P +
Sbjct: 414 ACTHAGMVMEGWWYFDLMQRVYKIEPKVEHYGCMVDLLARAGLVENSEELIRMVPVK-AG 472
Query: 380 VVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRV 439
+W LL CS H + E+GE V ++ +E+E G Y+L+ N+ A GR+ D E +R +
Sbjct: 473 SAIWGALLSGCSNHLDSELGEIVAKRFIELEPQDIGPYILLSNMYAAKGRWDDVEHVRLM 532
Query: 440 MDERNAFKVPGCSLV 454
+ E+ K SLV
Sbjct: 533 IKEKGLQKEAASSLV 547
>gi|226493697|ref|NP_001147320.1| selenium-binding protein-like [Zea mays]
gi|195609890|gb|ACG26775.1| selenium-binding protein-like [Zea mays]
Length = 605
Score = 250 bits (639), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 158/480 (32%), Positives = 257/480 (53%), Gaps = 44/480 (9%)
Query: 7 SQTPNNITT-----QIHSHLLTTNSLLHHSQLFNTLLHFYSLAESPQKAFLLYKQLQQIY 61
+ TP +T+ Q HS L+ + H+ LL F LA P F +L
Sbjct: 9 APTPVPLTSFAVLRQHHSQLIRLG-VASHAAHARRLLSF--LARDPDSHFPYASRL---L 62
Query: 62 THSHSPLPPLF--------------------------DSFTYSFLIRTCATLSHPNLGTQ 95
H P P LF D FT+ ++ + L +L Q
Sbjct: 63 AHHPDPHPALFNPLFSALPTRHAARLLALMLSLPLRPDHFTFPQILPSAQPL---HLVAQ 119
Query: 96 LHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLF-DEMPERNLVTWNVMITGLVKWG 154
LHA++ K+GF +H AL+ Y++ +S++F ++V+W M+ GL+K G
Sbjct: 120 LHALLLKLGFHAHTQSLNALLAAYLANARPDLASRVFRGGGGALDVVSWTTMVGGLLKLG 179
Query: 155 ELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVL 214
+ AR LF+ MP RN+VSW ++ GY + R +AL +F +M A + + +
Sbjct: 180 LFDDARVLFDGMPERNLVSWNAMMSGYVKACRFLDALEVFDEMRA-RGVDGNVFVAATAV 238
Query: 215 PAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERK 274
A G + + +H + E+ G D ++ ++D Y KCGC+ A ++FE + + K
Sbjct: 239 VACTGAGALARGREVHRWVEQSGIQ-MDEKLATAVVDMYCKCGCVEEAWRVFEALPLAAK 297
Query: 275 NLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFF 334
L +W +I GFA+HG G++A++ FGRM++ G+ P+ VT ++VL AC+H G++ EG ++F
Sbjct: 298 GLTTWNCMIGGFAVHGRGQDALKLFGRMEREGVAPDDVTLVNVLTACAHAGMLSEGRHYF 357
Query: 335 DKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHG 394
+ + + + P ++HYGC++D+ GRAGRLE+A+K +P E DV V L GA HG
Sbjct: 358 NYVPQRYGIEPKMEHYGCMVDLYGRAGRLEEAKKVIQDMPME-PDVGVLGALFGASKIHG 416
Query: 395 NVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
+V++GE + +++E++ G YVL+ N+LA GR+ D R+RR+MDERN K G S++
Sbjct: 417 DVDLGEAIGWRVIELDPQNSGRYVLLANLLATAGRWEDVARVRRLMDERNVSKEAGRSVI 476
>gi|413918675|gb|AFW58607.1| hypothetical protein ZEAMMB73_481408 [Zea mays]
Length = 694
Score = 250 bits (639), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 136/383 (35%), Positives = 214/383 (55%), Gaps = 36/383 (9%)
Query: 72 FDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKL 131
FD T ++ C + LG + + + G + + TAL++MY
Sbjct: 219 FDEVTLVSVVTACGRIGDAKLGKWVAGHVDEEGLARNPKLVTALMDMYA----------- 267
Query: 132 FDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEAL 191
K GE+ AR LF+ M R+VV+W+ +I GYT+ ++ EAL
Sbjct: 268 --------------------KCGEIGKARRLFDGMQSRDVVAWSAMISGYTQADQCREAL 307
Query: 192 ALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLID 251
LF +M EP+++T+++VL A G +++ + +H Y ++ + I + L+D
Sbjct: 308 GLFSEMQLAR-VEPNDVTMVSVLSACAVLGALETGKWVHSYVRRKRLSLTTI-LGTALVD 365
Query: 252 TYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNR 311
YAKCGCI A + FE + V KN +WT++I G A +G G+EA+E F M++ G++P
Sbjct: 366 FYAKCGCIDDAVEAFESMPV--KNSWTWTALIKGMATNGRGREALELFSSMREAGIEPTD 423
Query: 312 VTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTAL 371
VTF+ VL ACSH LVEEG FD M + + P ++HYGC++D+LGRAG +++A +
Sbjct: 424 VTFIGVLMACSHSCLVEEGRRHFDSMARDYGIKPRVEHYGCMVDLLGRAGLVDEAYQFIR 483
Query: 372 GIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFG 431
+P E + V+WR LL +C+ H NV +GE ++I+ + + GDYVL+ NI A G++
Sbjct: 484 TMPIE-PNAVIWRALLSSCAVHRNVGIGEEALKQIISLNPSHSGDYVLLSNIYASAGQWK 542
Query: 432 DAERLRRVMDERNAFKVPGCSLV 454
DA +R+ M +R K PGCSL+
Sbjct: 543 DAAMVRKEMKDRGIEKTPGCSLI 565
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/285 (21%), Positives = 114/285 (40%), Gaps = 59/285 (20%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
++ ++ Y+ A+ ++A L+ ++Q + T ++ CA L G
Sbjct: 290 WSAMISGYTQADQCREALGLFSEMQLARVEP--------NDVTMVSVLSACAVLGALETG 341
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
+H+ + + + TALV+ Y G + D+ + F+ MP +N TW +I G+
Sbjct: 342 KWVHSYVRRKRLSLTTILGTALVDFYAKCGCIDDAVEAFESMPVKNSWTWTALIKGMATN 401
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
G R EAL LF M EP+++T + V
Sbjct: 402 G-------------------------------RGREALELFSSMREAG-IEPTDVTFIGV 429
Query: 214 LPA-----IWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFED 268
L A + + G + YG K + C++D + G + A +
Sbjct: 430 LMACSHSCLVEEGRRHFDSMARDYGIKPRVEHY-----GCMVDLLGRAGLVDEAYQFIRT 484
Query: 269 ISVERKNLVSWTSIISGFAMH---GMGKEAVENFGRMQKVGLKPN 310
+ +E N V W +++S A+H G+G+EA++ Q + L P+
Sbjct: 485 MPIE-PNAVIWRALLSSCAVHRNVGIGEEALK-----QIISLNPS 523
>gi|194696956|gb|ACF82562.1| unknown [Zea mays]
gi|413957085|gb|AFW89734.1| selenium-binding protein-like protein [Zea mays]
Length = 605
Score = 250 bits (639), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 159/473 (33%), Positives = 254/473 (53%), Gaps = 51/473 (10%)
Query: 22 LTTNSLL--HHSQLFN-----------TLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPL 68
LT+ +LL HHSQL LL F LA P F +L H P
Sbjct: 15 LTSFALLRQHHSQLIRLGVASHAAHARRLLSF--LARDPDSHFPYASRL---LAHHPDPH 69
Query: 69 PPLF--------------------------DSFTYSFLIRTCATLSHPNLGTQLHAVISK 102
P LF D FT+ ++ + L +L QLHA++ K
Sbjct: 70 PALFNPLFSALPTRHAARLLALMLSLPLRPDHFTFPQILPSAQPL---HLVAQLHALLLK 126
Query: 103 VGFQSHVYVNTALVNMYVSLGFLKDSSKLF-DEMPERNLVTWNVMITGLVKWGELEFARS 161
+GF +H AL+ Y++ +S++F ++V+W M+ GL+K G + AR
Sbjct: 127 LGFHAHTQSLNALLAAYLANARPDLASRVFRGGGGALDVVSWTTMVGGLLKLGLFDDARV 186
Query: 162 LFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNG 221
LF+ MP RN+VSW ++ GY + R +AL +F +M A + + + A G
Sbjct: 187 LFDGMPERNLVSWNAMMSGYVKACRFLDALEVFDEMRA-RGVDGNVFVAATAVVACTGAG 245
Query: 222 DVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTS 281
+ + +H + E+ G D ++ ++D Y KCGC+ A ++FE + + K L +W
Sbjct: 246 ALARGREVHRWVEQSGIQ-MDEKLATAVVDMYCKCGCVEEAWRVFEALPLAAKGLTTWNC 304
Query: 282 IISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEEC 341
+I GFA+HG G++A++ FGRM++ G+ P+ VT ++VL AC+H G++ EG ++F+ + +
Sbjct: 305 MIGGFAVHGRGEDALKLFGRMEREGVAPDDVTLVNVLTACAHAGMLSEGRHYFNYVPQRY 364
Query: 342 EVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGER 401
+ P ++HYGC++D+ GRAGRLE+A+K +P E DV V L GA HG+V++GE
Sbjct: 365 GIEPKMEHYGCMVDLYGRAGRLEEAKKVIQDMPME-PDVGVLGALFGASKIHGDVDLGEA 423
Query: 402 VTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
+ +++E++ G YVL+ N+LA GR+ D R+RR+MDERN K G S++
Sbjct: 424 IGWRVIELDPQNSGRYVLLANLLATAGRWEDVARVRRLMDERNVSKEAGRSVI 476
>gi|297739965|emb|CBI30147.3| unnamed protein product [Vitis vinifera]
Length = 538
Score = 250 bits (639), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 149/423 (35%), Positives = 232/423 (54%), Gaps = 46/423 (10%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNL 92
++NT++ YS +++P++A +LY + + PP ++FT+ FL+ +CA LS
Sbjct: 1 MWNTMIRGYSRSDNPREAIVLYMSMI-----AKGIAPP--NNFTFPFLLNSCARLSSLEP 53
Query: 93 GTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVK 152
G ++H+ I K GF+S ++V AL+++Y
Sbjct: 54 GHEVHSHIIKHGFESDLFVRNALIHLYSV------------------------------- 82
Query: 153 WGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILA 212
+G L AR+LF+E R++VS+ +I GY +N+ AL LF +M E+T++A
Sbjct: 83 FGNLNLARTLFDESLVRDLVSYNTMIKGYAEVNQPESALCLFGEM-----QNSDEVTLVA 137
Query: 213 VLPAIWQNGDVK-SCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISV 271
VL A + G +L H Y E F I + ++D YAKCG I SA ++F +
Sbjct: 138 VLSACARLGAFDLGKRLYHQYIENGVFNQNTI-LTAAVMDMYAKCGSIDSALEIFRRVGK 196
Query: 272 ERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGL 331
K + S+I+G A HG+G+ A+ F + GLKP+ VTF+ VL AC H GL+EEG
Sbjct: 197 NMKTGFVFNSMIAGLAQHGLGETAITVFRELISTGLKPDEVTFVGVLCACGHSGLIEEGK 256
Query: 332 NFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACS 391
F+ M + P ++HYGC++D+LGR G LE+A +P E + V+WR LL AC
Sbjct: 257 KLFESMFNAYGIKPQMEHYGCMVDLLGRYGCLEEAYDLVQKMPFE-ANSVIWRALLSACR 315
Query: 392 FHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGC 451
HGNV++GE +K+LEME +G YVL+ NILA ++ +A ++R+VM++ K PG
Sbjct: 316 THGNVKIGEIAGQKLLEMEAQHGARYVLLSNILADANQWEEARQVRKVMEDHGIRKPPGW 375
Query: 452 SLV 454
S +
Sbjct: 376 SYI 378
>gi|226531155|ref|NP_001148193.1| methyltransferase small domain [Zea mays]
gi|195616632|gb|ACG30146.1| methyltransferase small domain [Zea mays]
Length = 656
Score = 250 bits (639), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 129/373 (34%), Positives = 212/373 (56%), Gaps = 3/373 (0%)
Query: 80 LIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERN 139
L++ CA S G QLH VI K GF + +V LV+ Y G + + F + +
Sbjct: 283 LMKACARYSAVTEGQQLHTVILKNGFDALAFVQATLVHFYGCCGLIGLAQMTFRLSDKSH 342
Query: 140 LVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVA 199
+WN ++ L++ G + AR LF++MP R+ VSW+ +I GY + RS+ AL LF M+
Sbjct: 343 TASWNALLAALLRNGLIREARELFDDMPERDTVSWSTMISGYVQTGRSDMALKLFYSMLN 402
Query: 200 CEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCI 259
EP+E+T+ + L AI +G + + IH Y R D + + LID YAKCG I
Sbjct: 403 TS-IEPNEVTLASALSAIADSGTLDQGKWIHDYIMNRPVQLTD-NLSSGLIDMYAKCGSI 460
Query: 260 FSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLN 319
A + F ++ + ++ W ++I A+HG +++ F ++Q+ +KPN +TF+ VL+
Sbjct: 461 ADAVQFFNRVNDKFSSVSPWNAMICSLAIHGYAHMSLDLFSQLQRTSIKPNSITFIGVLS 520
Query: 320 ACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITD 379
AC H G V +G +F+ M E + P IKHYGC++D+LGRAG LE+AE+ +P + D
Sbjct: 521 ACCHAGTVTKGKYYFESMTREYGIQPTIKHYGCMVDLLGRAGYLEEAEQLVSMMPMK-PD 579
Query: 380 VVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRV 439
VV+W ++L A GNV +GER ++ ++++ +G + + NI A G + + +R+
Sbjct: 580 VVIWGSILSASRAQGNVALGERAAEELAKLDQTHGASKIALSNIYADAGHWTNVSVVRKE 639
Query: 440 MDERNAFKVPGCS 452
+ + N ++ G S
Sbjct: 640 LQDANLERLTGRS 652
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 100/396 (25%), Positives = 169/396 (42%), Gaps = 43/396 (10%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+ TL+ ++ A +A +++ + S + +P + T + I A P
Sbjct: 112 YTTLVTAFARAGHAARAVAVFRSML-----SENVVP---NEATLAGAITAFARCGAPATV 163
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
+H + V V T LV+ Y + L + LFD M RN VTWNVM+ G VK
Sbjct: 164 GMIHGFALQRALDGFVIVATNLVHAYAGVLELCSARALFDGMTHRNTVTWNVMLNGYVKA 223
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
++ A +F +P R+ VSW +IDGY + ++A+ + +MV E+ ++ +
Sbjct: 224 KMIDMAAEVFWRIPERDEVSWLTLIDGYICADLISDAMKAYVQMVGEVGANDYEVLLVDL 283
Query: 214 LPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKC----------------- 256
+ A + V Q +H K GF A V L+ Y C
Sbjct: 284 MKACARYSAVTEGQQLHTVILKNGFDALAF-VQATLVHFYGCCGLIGLAQMTFRLSDKSH 342
Query: 257 --------------GCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRM 302
G I A +LF+D+ ++ VSW+++ISG+ G A++ F M
Sbjct: 343 TASWNALLAALLRNGLIREARELFDDM--PERDTVSWSTMISGYVQTGRSDMALKLFYSM 400
Query: 303 QKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGR 362
++PN VT S L+A + G +++G D ++ L D G LIDM + G
Sbjct: 401 LNTSIEPNEVTLASALSAIADSGTLDQGKWIHDYIMNRPVQLTDNLSSG-LIDMYAKCGS 459
Query: 363 LEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEM 398
+ A + + + + V W ++ + + HG M
Sbjct: 460 IADAVQFFNRVNDKFSSVSPWNAMICSLAIHGYAHM 495
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 141/280 (50%), Gaps = 22/280 (7%)
Query: 67 PLPPLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGF-QSHVYVNTALVNMYVSL-GF 124
PL P FL+ + + G QLHA+ +K G S+V+V ++++ Y L
Sbjct: 7 PLAP--------FLVASLKRAARLRCGEQLHALAAKSGLLASNVFVRNSVLSSYSRLPSS 58
Query: 125 LKDSSKLFDEMPE--RNLVTWNVMITGLVKWGELEFARSLFEEMPC--RNVVSWTGIIDG 180
L + +LFDE P R+ N ++ L + G L+ A+ L EEMP R+ VS+T ++
Sbjct: 59 LASALQLFDETPPPLRDATARNSILAALTRAGHLDRAQGLLEEMPRIHRDAVSYTTLVTA 118
Query: 181 YTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTA 240
+ R + A+A+FR M++ E P+E T+ + A + G + +IHG+ +R
Sbjct: 119 FARAGHAARAVAVFRSMLS-ENVVPNEATLAGAITAFARCGAPATVGMIHGFALQRALDG 177
Query: 241 FDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFG 300
F I N L+ YA + SA LF+ ++ +N V+W +++G+ M A E F
Sbjct: 178 FVIVATN-LVHAYAGVLELCSARALFDGMT--HRNTVTWNVMLNGYVKAKMIDMAAEVFW 234
Query: 301 RMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEE 340
R+ + + V++L++++ L+ + + + +MV E
Sbjct: 235 RIP----ERDEVSWLTLIDGYICADLISDAMKAYVQMVGE 270
>gi|147859488|emb|CAN83542.1| hypothetical protein VITISV_021357 [Vitis vinifera]
Length = 795
Score = 250 bits (639), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 136/382 (35%), Positives = 218/382 (57%), Gaps = 5/382 (1%)
Query: 73 DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLF 132
+ F++ +I + L N G QLHA K+G +S+V+V +A+V+ Y L + ++ K F
Sbjct: 367 NQFSFGTVIPSATALQDLNSGRQLHACAIKMGLESNVFVGSAVVDFYAKLTSINEAQKAF 426
Query: 133 DEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALA 192
++ E N+V++ +I G +K + A +LF MP RNVVSW +I GY++M + EA+
Sbjct: 427 EDTHEPNVVSYTTLIRGYLKKERFDDALALFRXMPERNVVSWNAMISGYSQMGYNEEAVN 486
Query: 193 LFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDT 252
LF M+ E P+E T + A+ + + HG K FD+ + N L+
Sbjct: 487 LFVVMLR-EGXLPNERTFPCAISAVANIAALGMGRSFHGSAVKF-LGKFDVFIGNSLVSF 544
Query: 253 YAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRV 312
YAKCG + + +F ++ +KN+VSW ++I G+A HG G EA+ F +MQ GL+PN V
Sbjct: 545 YAKCGSMEESLLVFN--TLPKKNIVSWNALICGYANHGRGMEAIYFFEKMQDTGLRPNSV 602
Query: 313 TFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALG 372
T L +L AC+H GLV++G ++F+K E L +H+ C++D+L R+GR ++AEK
Sbjct: 603 TLLGLLLACNHSGLVDKGYSYFNKARVEEPGLLTPEHHACMVDLLSRSGRFKEAEKFLHE 662
Query: 373 IPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGD 432
+P + + W+ LLG C H N+E+GE RKIL ++ YV++ N + GR+
Sbjct: 663 LPF-VPGIGFWKALLGGCRIHSNMELGELAARKILALDPEDVSSYVMLSNAHSAAGRWQS 721
Query: 433 AERLRRVMDERNAFKVPGCSLV 454
+R+ M E+ VPG S +
Sbjct: 722 VSMIRKEMREKRMKGVPGSSWI 743
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 122/269 (45%), Gaps = 34/269 (12%)
Query: 155 ELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVL 214
EL A LF+E+P +VVS T I + R + EA+ F +M+A +P++ + V+
Sbjct: 317 ELWDACKLFDEVPNWDVVSATATIGCFARYHHHEEAIYFFSRMLALN-IKPNQFSFGTVI 375
Query: 215 PAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFED------ 268
P+ D+ S + +H K G + ++ V + ++D YAK I A K FED
Sbjct: 376 PSATALQDLNSGRQLHACAIKMGLES-NVFVGSAVVDFYAKLTSINEAQKAFEDTHEPNV 434
Query: 269 ----------ISVER-------------KNLVSWTSIISGFAMHGMGKEAVENFGRMQKV 305
+ ER +N+VSW ++ISG++ G +EAV F M +
Sbjct: 435 VSYTTLIRGYLKKERFDDALALFRXMPERNVVSWNAMISGYSQMGYNEEAVNLFVVMLRE 494
Query: 306 GLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQ 365
G PN TF ++A ++ + G +F V+ D+ L+ + G +E+
Sbjct: 495 GXLPNERTFPCAISAVANIAALGMGRSFHGSAVKFLGKF-DVFIGNSLVSFYAKCGSMEE 553
Query: 366 AEKTALGIPSEITDVVVWRTLLGACSFHG 394
+ +P + ++V W L+ + HG
Sbjct: 554 SLLVFNTLPKK--NIVSWNALICGYANHG 580
>gi|347954504|gb|AEP33752.1| chloroplast biogenesis 19, partial [Lobularia maritima]
Length = 496
Score = 250 bits (639), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 143/384 (37%), Positives = 216/384 (56%), Gaps = 9/384 (2%)
Query: 75 FTYSFLIRTCATLSH--PNLGTQLHAVISKVGF-QSHVYVNTALVNMYVSLGFLKDSSKL 131
T+ L+ C S + G LH K+G ++HV V TA++ MY G + + +
Sbjct: 68 ITFIALLSGCGDFSSGSESFGDLLHGYACKLGLDRNHVMVGTAIIGMYSKHGRVSKARLV 127
Query: 132 FDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEAL 191
FD M +N +TWN MI G ++ G+++ A LF+EMP R ++SWT +I+G+ + EAL
Sbjct: 128 FDHMEGKNSMTWNTMIDGYMRKGKIDDAYKLFDEMPERGLISWTAMINGFVKKGFHEEAL 187
Query: 192 ALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLID 251
FR+M + EP + I+AVL A G + +H Y R F ++RV N ID
Sbjct: 188 VWFREMQSSG-VEPDYVAIIAVLAACTNLGALSFGLWVHRYLVSRDFRN-NVRVNNSSID 245
Query: 252 TYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNR 311
+ +CGC+ A +F+ + E++ +VSW S+I F+ +G E++ F RMQ+ G KPN
Sbjct: 246 LHCRCGCVELAQPVFDHM--EKRTVVSWNSVIVVFSANGHADESLVYFRRMQEEGFKPNA 303
Query: 312 VTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTAL 371
VTF L ACSH GLVEEGL +F M +E + P I+HYGCL+D+ RAGRLE A
Sbjct: 304 VTFTGALTACSHVGLVEEGLRYFQTMKKEYRISPRIEHYGCLVDLYSRAGRLEDALNVVQ 363
Query: 372 GIPSEITDVVVWRTLLGACSFHG-NVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRF 430
+P + +VV+ +LL AC HG N + ER+ + + + +YV++ N+ A G++
Sbjct: 364 SMPMKPNEVVIG-SLLAACRTHGNNTVLAERLMKHLSDTNVKSHSNYVILSNMYAADGKW 422
Query: 431 GDAERLRRVMDERNAFKVPGCSLV 454
A ++RR M K PG S +
Sbjct: 423 EGASKMRRKMKGLGLKKQPGFSSI 446
Score = 44.7 bits (104), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 49/95 (51%), Gaps = 8/95 (8%)
Query: 277 VSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDK 336
+SWTS I+ + +G EA + F M+ G++PN +TF+++L+ C G G F
Sbjct: 33 ISWTSRITLLSRNGRLAEAAKEFSDMRFAGVEPNHITFIALLSGC---GDFSSGSESFGD 89
Query: 337 MVE--ECEVLPDIKHY---GCLIDMLGRAGRLEQA 366
++ C++ D H +I M + GR+ +A
Sbjct: 90 LLHGYACKLGLDRNHVMVGTAIIGMYSKHGRVSKA 124
>gi|10178273|emb|CAC08331.1| putative protein [Arabidopsis thaliana]
Length = 1280
Score = 250 bits (639), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 141/421 (33%), Positives = 241/421 (57%), Gaps = 11/421 (2%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+N ++ +S + +P+K+ +Y Q+ + LP D TY FL+++ + LS+ LG
Sbjct: 822 WNFVIRGFSNSRNPEKSISVYIQMLRF-----GLLP---DHMTYPFLMKSSSRLSNRKLG 873
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
LH + K G + +++ L++MY S + KLFDEMP +NLVTWN ++ K
Sbjct: 874 GSLHCSVVKSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKS 933
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
G++ AR +F+EM R+VV+W+ +IDGY + N+AL +F +M+ ++ +E+T+++V
Sbjct: 934 GDVVSARLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSV 993
Query: 214 LPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVER 273
+ A G + + +H Y + + LID YAKCG I A +F SV+
Sbjct: 994 ICACAHLGALNRGKTVHRYILDVHL-PLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKE 1052
Query: 274 KNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNF 333
+ + W +II G A HG +E+++ F +M++ + P+ +TFL +L ACSHGGLV+E +F
Sbjct: 1053 TDALMWNAIIGGLASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACSHGGLVKEAWHF 1112
Query: 334 FDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFH 393
F K ++E P +HY C++D+L RAG ++ A +P + T ++ LL C H
Sbjct: 1113 F-KSLKESGAEPKSEHYACMVDVLSRAGLVKDAHDFISEMPIKPTGSML-GALLNGCINH 1170
Query: 394 GNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSL 453
GN+E+ E V +K++E++ G YV + N+ A +F A +R M+++ K+ G S+
Sbjct: 1171 GNLELAETVGKKLIELQPHNDGRYVGLANVYAINKQFRAARSMREAMEKKGVKKIAGHSI 1230
Query: 454 V 454
+
Sbjct: 1231 L 1231
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 112/255 (43%), Gaps = 44/255 (17%)
Query: 104 GFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPER----NLVTWNVMITGLVKWGELEFA 159
GF+ + T LV G D+ K D++ ++V I GL+K ++
Sbjct: 539 GFEPWIKHTTFLVKKLCENGRAVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRG 598
Query: 160 RSLFEEM----PCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLP 215
LF ++ C +V+++ +I + R+ EA LF +MV+ + +P+ T +++
Sbjct: 599 LELFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVS-KGLKPTVATYNSMID 657
Query: 216 AIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKN 275
+ G++ R L+C++ +++ED + +
Sbjct: 658 GWCKEGEID-------------------RGLSCIV-------------RMYED--EKNPD 683
Query: 276 LVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFD 335
++++TS+I G G EA+ + M+ PNR+TF++++ G E L +F
Sbjct: 684 VITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNRITFMALIQGLCKCGWSGEALVYFR 743
Query: 336 KMVEECEVLPDIKHY 350
+M EE E+ PD Y
Sbjct: 744 EM-EEKEMEPDSAVY 757
>gi|297597850|ref|NP_001044616.2| Os01g0815900 [Oryza sativa Japonica Group]
gi|56785064|dbj|BAD82703.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|255673814|dbj|BAF06530.2| Os01g0815900 [Oryza sativa Japonica Group]
Length = 566
Score = 250 bits (638), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 144/421 (34%), Positives = 233/421 (55%), Gaps = 13/421 (3%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+N+L+ YS + L+K +Q + D T ++ C L ++
Sbjct: 156 WNSLICGYSQCNRFKDILALFKLMQNEGVKA--------DKVTMIKVVSACTRLGDYSMA 207
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
+ I + VY+ LV+ + G L+ + K+F M RN+VT N MI K
Sbjct: 208 DYMVRYIEDYCIEVDVYLGNTLVDYFGRRGQLQSAEKVFFNMKVRNIVTMNAMIAAYAKG 267
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
++ AR +F+++P ++++SW+ +I GY++ N ++AL +FR+M + +P I I +V
Sbjct: 268 QDIVSARKIFDQIPKKDLISWSSMISGYSQANHFSDALEIFRQMQRAK-VKPDAIVIASV 326
Query: 214 LPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVER 273
+ + G + + +H Y + A D + N LID Y KCG A ++F+++ +
Sbjct: 327 VSSCAHLGALDLGKWVHEYVRRNNIKA-DTIMENSLIDMYMKCGSAKEALQVFKEM--KE 383
Query: 274 KNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNF 333
K+ +SW SII G A +G KE++ F M G +PN VTFL VL AC++ LVEEGL+
Sbjct: 384 KDTLSWNSIIIGLANNGFEKESLNLFQAMLTEGFRPNGVTFLGVLIACANAKLVEEGLDH 443
Query: 334 FDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFH 393
F+ M + P +KHYGC++D+LGRAG+LE+A + +P + D VVWR LLG+C+ H
Sbjct: 444 FESMKRLYSLEPQMKHYGCVVDLLGRAGQLEKALRFITEMPID-PDPVVWRILLGSCNTH 502
Query: 394 GNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSL 453
G+V + E VT+K+ E+E G+Y L+ N A R+ +A +R+ M + + K PGCS
Sbjct: 503 GDVAIAEIVTKKLNELEPSNSGNYTLLSNAYASAHRWSEAMNVRQCMADTDVRKSPGCSA 562
Query: 454 V 454
V
Sbjct: 563 V 563
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 96/362 (26%), Positives = 187/362 (51%), Gaps = 29/362 (8%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNL 92
L+N L+ + +++P A YK+ Q + P D+ T+ F+++ CA ++ N
Sbjct: 54 LWNILIRGLAQSDAPADAIAFYKKAQG------GGMVP--DNLTFPFILKACARINALNE 105
Query: 93 GTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVK 152
G Q+H I+K+G S ++V+ +L+++Y + G L + +FDEM +++V+WN +I G +
Sbjct: 106 GEQMHNHITKLGLLSDIFVSNSLIHLYAACGNLCYARSVFDEMVVKDVVSWNSLICGYSQ 165
Query: 153 WGELEFARSLFEEMPCRNV----VSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEI 208
+ +LF+ M V V+ ++ TR+ + A + R + +Y ++
Sbjct: 166 CNRFKDILALFKLMQNEGVKADKVTMIKVVSACTRLGDYSMADYMVRYIE--DYCIEVDV 223
Query: 209 TILAVLPAIW-QNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFE 267
+ L + + G ++S + + + R +I +N +I YAK I SA K+F+
Sbjct: 224 YLGNTLVDYFGRRGQLQSAEKVFFNMKVR-----NIVTMNAMIAAYAKGQDIVSARKIFD 278
Query: 268 DISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLV 327
I +K+L+SW+S+ISG++ +A+E F +MQ+ +KP+ + SV+++C+H G +
Sbjct: 279 QIP--KKDLISWSSMISGYSQANHFSDALEIFRQMQRAKVKPDAIVIASVVSSCAHLGAL 336
Query: 328 EEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEI--TDVVVWRT 385
+ G + + V + D LIDM + G + K AL + E+ D + W +
Sbjct: 337 DLG-KWVHEYVRRNNIKADTIMENSLIDMYMKCG----SAKEALQVFKEMKEKDTLSWNS 391
Query: 386 LL 387
++
Sbjct: 392 II 393
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 38/277 (13%)
Query: 130 KLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNE 189
K+FD++ WN++I GL + + P +
Sbjct: 42 KVFDQIEAPTTFLWNILIRGLAQ-----------SDAPA--------------------D 70
Query: 190 ALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCL 249
A+A ++K P +T +L A + + + +H + K G + DI V N L
Sbjct: 71 AIAFYKKAQGGGMV-PDNLTFPFILKACARINALNEGEQMHNHITKLGLLS-DIFVSNSL 128
Query: 250 IDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKP 309
I YA CG + A +F+++ V K++VSW S+I G++ K+ + F MQ G+K
Sbjct: 129 IHLYAACGNLCYARSVFDEMVV--KDVVSWNSLICGYSQCNRFKDILALFKLMQNEGVKA 186
Query: 310 NRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKT 369
++VT + V++AC+ G ++ + +E+ + D+ L+D GR G+L+ AEK
Sbjct: 187 DKVTMIKVVSACTRLGDYSMA-DYMVRYIEDYCIEVDVYLGNTLVDYFGRRGQLQSAEKV 245
Query: 370 ALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKI 406
+ ++ ++V ++ A + ++ ++ +I
Sbjct: 246 FFNM--KVRNIVTMNAMIAAYAKGQDIVSARKIFDQI 280
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 70/171 (40%), Gaps = 7/171 (4%)
Query: 262 ASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNAC 321
A K+F+ I E W +I G A +A+ + + Q G+ P+ +TF +L AC
Sbjct: 40 AHKVFDQI--EAPTTFLWNILIRGLAQSDAPADAIAFYKKAQGGGMVPDNLTFPFILKAC 97
Query: 322 SHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVV 381
+ + EG + + + +L DI LI + G L A + + DVV
Sbjct: 98 ARINALNEGEQMHNH-ITKLGLLSDIFVSNSLIHLYAACGNLCYARSVFDEMV--VKDVV 154
Query: 382 VWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGD 432
W +L+ C + + + L G D V M +++ R GD
Sbjct: 155 SWNSLI--CGYSQCNRFKDILALFKLMQNEGVKADKVTMIKVVSACTRLGD 203
>gi|147841045|emb|CAN68552.1| hypothetical protein VITISV_014227 [Vitis vinifera]
Length = 1309
Score = 250 bits (638), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 149/462 (32%), Positives = 243/462 (52%), Gaps = 60/462 (12%)
Query: 16 QIHSHLLTTNSLLHHSQLFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLF--- 72
Q+H+ + + +L + + N L++FYS + A+ L+ + + S S + F
Sbjct: 80 QVHAQA-SVHGMLENIVVANKLIYFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKV 138
Query: 73 --------------------DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVN 112
D++T F+IR C L + +G +H ++ K G +V
Sbjct: 139 GDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVC 198
Query: 113 TALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVV 172
ALV+MYV K E+E AR LF++M R++V
Sbjct: 199 AALVDMYV-------------------------------KCREIEDARFLFDKMQERDLV 227
Query: 173 SWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGY 232
+WT +I GY ++NE+L LF KM E P ++ ++ V+ A + G + ++I Y
Sbjct: 228 TWTVMIGGYAECGKANESLVLFEKMRE-EGVVPDKVAMVTVVFACAKLGAMHKARIIDDY 286
Query: 233 GEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMG 292
+++ F D+ + +ID YAKCGC+ SA ++F+ +E KN++SW+++I+ + HG G
Sbjct: 287 IQRKKFQ-LDVILGTAMIDMYAKCGCVESAREIFD--RMEEKNVISWSAMIAAYGYHGQG 343
Query: 293 KEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGC 352
++A++ F M G+ P+++T S+L ACSH GLVEEGL FF M E+ V D+KHY C
Sbjct: 344 RKALDLFPMMLSSGMLPDKITLASLLYACSHAGLVEEGLRFFSSMWEDYSVRTDVKHYTC 403
Query: 353 LIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERG 412
++D+LGRAGRL++A K + E D +W LGAC H +V + E+ +LE++
Sbjct: 404 VVDLLGRAGRLDEALKLIKSMTIE-KDEGLWGAFLGACRTHKDVVLAEKAATSLLELQSQ 462
Query: 413 YGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
G YVL+ NI A GR+ D ++R +M +R K PG + +
Sbjct: 463 NPGHYVLLSNIYANAGRWEDVAKIRDLMSQRRLKKTPGWTWI 504
Score = 248 bits (632), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 150/470 (31%), Positives = 245/470 (52%), Gaps = 62/470 (13%)
Query: 10 PNNITT--QIHSHLLTTNSLLHHSQLFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSP 67
P N+T Q+H + + +L + + N L+ FYS + A+ L+ + + S S
Sbjct: 748 PTNLTQVRQVHXQA-SVHGMLQNLIVANKLVXFYSYYRALDDAYGLFDGMCVRDSVSWSV 806
Query: 68 LPPLF-----------------------DSFTYSFLIRTCATLSHPNLGTQLHAVISKVG 104
+ F D++T F+IR C L + +G +H ++ K G
Sbjct: 807 MVGGFAKVGDYMNCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFG 866
Query: 105 FQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFE 164
+V ALV+MY K E+E AR LF+
Sbjct: 867 LDLDHFVCAALVDMYG-------------------------------KCREIEDARFLFD 895
Query: 165 EMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVK 224
+M R++V+WT +I GY +NE+L LF KM E P ++ ++ V+ A + G +
Sbjct: 896 KMXERDLVTWTVMIGGYAECGNANESLVLFDKMRE-EGVVPDKVAMVTVVFACAKLGAMH 954
Query: 225 SCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIIS 284
+ I Y +++ F D+ + +ID +AKCGC+ SA ++F+ +E KN++SW+++I+
Sbjct: 955 KARTIDDYIQRKKFQ-LDVILGTAMIDMHAKCGCVESAREIFD--RMEEKNVISWSAMIA 1011
Query: 285 GFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVL 344
+ HG G++A++ F M + G+ PN++T +S+L ACSH GLVEEGL FF M E+ V
Sbjct: 1012 AYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACSHAGLVEEGLRFFSXMWEDYSVR 1071
Query: 345 PDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTR 404
D+KHY C++D+LGRAGRL++A K + E D +W LGAC H +V + E+
Sbjct: 1072 XDVKHYTCVVDLLGRAGRLDEALKLIXSMTXE-KDEGLWGAFLGACRTHKDVXLAEKAAT 1130
Query: 405 KILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
+LE++ G Y+L+ NI A GR+ D ++R +M +R K+PG + +
Sbjct: 1131 SLLELQPQNPGHYILLSNIYANAGRWEDVAKIRDLMSQRRLKKIPGWTWI 1180
>gi|347954520|gb|AEP33760.1| organelle transcript processing 82, partial [Capsella
bursa-pastoris]
Length = 706
Score = 250 bits (638), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 143/422 (33%), Positives = 239/422 (56%), Gaps = 44/422 (10%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+N L+ Y+ + ++A L+K++ + + + P D T ++ CA + LG
Sbjct: 203 WNALISGYAETGNYKEALELFKEMMK------TNVKP--DESTMVTVLSACAQSASIELG 254
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
Q+H+ I GF S++ + AL+++Y+ K
Sbjct: 255 RQVHSWIDDHGFGSNLKIVNALIDLYI-------------------------------KC 283
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
GE+E A LFE + ++V+SW +I GYT MN EAL LF++M+ + P+E+T+L++
Sbjct: 284 GEVETASGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGES-PNEVTMLSI 342
Query: 214 LPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVL-NCLIDTYAKCGCIFSASKLFEDISVE 272
LPA G + + IH Y +KR + L LID YAKCG I +A ++F+ S+
Sbjct: 343 LPACAHLGAIDIGRWIHVYIDKRLKGVSNPSSLRTSLIDMYAKCGDIEAAQQVFD--SML 400
Query: 273 RKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLN 332
++L SW ++I GFAMHG A + F RM+K G++P+ +TF+ +L+ACSH G+++ G +
Sbjct: 401 NRSLSSWNAMIFGFAMHGRANPAFDIFSRMRKDGIEPDDITFVGLLSACSHSGMLDLGRH 460
Query: 333 FFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSF 392
F M E+ ++ P ++HYGC+ID+LG +G ++AE+ + + D V+W +LL AC
Sbjct: 461 IFRSMTEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINSMEMD-PDGVIWCSLLKACKM 519
Query: 393 HGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCS 452
HGNVE+GE + ++++E G YVL+ NI A GR+ + + R +++++ KVPGCS
Sbjct: 520 HGNVELGESFAQNLIKIEPKNSGSYVLLSNIYATAGRWNEVAKRRALLNDKGMKKVPGCS 579
Query: 453 LV 454
+
Sbjct: 580 SI 581
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 136/460 (29%), Positives = 232/460 (50%), Gaps = 53/460 (11%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNL 92
++NT+ ++L+ P A LY + + L P +S+T+ FL++ CA
Sbjct: 70 IWNTMFRGHALSSDPVSALYLYVCMISL------GLVP--NSYTFPFLLKACAKSKAFRE 121
Query: 93 GTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVK 152
G Q+H + K+G +YV+T+L+ MYV G +D+ K+FD+ R++V++ +I G
Sbjct: 122 GQQIHGHVLKLGCDLDLYVHTSLIAMYVKNGRXEDARKVFDQSSHRDVVSYTALIKGYAS 181
Query: 153 WGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILA 212
G + A+ +F+E+P ++VVSW +I GY EAL LF++M+ +P E T++
Sbjct: 182 NGYIXSAQKMFDEIPVKDVVSWNALISGYAETGNYKEALELFKEMMKTN-VKPDESTMVT 240
Query: 213 VLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVE 272
VL A Q+ ++ + +H + + GF + +++++N LID Y KCG + +AS LFE +S
Sbjct: 241 VLSACAQSASIELGRQVHSWIDDHGFGS-NLKIVNALIDLYIKCGEVETASGLFEGLSY- 298
Query: 273 RKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGL- 331
K+++SW ++I G+ + KEA+ F M + G PN VT LS+L AC+H G ++ G
Sbjct: 299 -KDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNEVTMLSILPACAHLGAIDIGRW 357
Query: 332 --NFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKT-------------------- 369
+ DK ++ ++ LIDM + G +E A++
Sbjct: 358 IHVYIDKRLKGVSNPSSLR--TSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFA 415
Query: 370 -------ALGIPSEI------TDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGG- 415
A I S + D + + LL ACS G +++G + R + E +
Sbjct: 416 MHGRANPAFDIFSRMRKDGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTEDYKITPKL 475
Query: 416 -DYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
Y M ++L G F +AE + M E + V CSL+
Sbjct: 476 EHYGCMIDLLGHSGLFKEAEEMINSM-EMDPDGVIWCSLL 514
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 65/138 (47%), Gaps = 5/138 (3%)
Query: 270 SVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEE 329
S++ NL+ W ++ G A+ A+ + M +GL PN TF +L AC+ E
Sbjct: 62 SIQEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLVPNSYTFPFLLKACAKSKAFRE 121
Query: 330 GLNFFDKMVE-ECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLG 388
G +++ C++ D+ + LI M + GR E A K + S DVV + L+
Sbjct: 122 GQQIHGHVLKLGCDL--DLYVHTSLIAMYVKNGRXEDARK--VFDQSSHRDVVSYTALIK 177
Query: 389 ACSFHGNVEMGERVTRKI 406
+ +G + +++ +I
Sbjct: 178 GYASNGYIXSAQKMFDEI 195
>gi|326491225|dbj|BAK05712.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 538
Score = 250 bits (638), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 146/368 (39%), Positives = 208/368 (56%), Gaps = 40/368 (10%)
Query: 92 LGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEM-PERNLVTWNVMITGL 150
L ++H + + G V ALV+MY G + + F M P +NLVTWN MI+
Sbjct: 182 LAREVHRRVLEAGVALDVVACNALVDMYAKCGDSAAALRCFRTMVPTKNLVTWNTMISAH 241
Query: 151 VKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMV---ACEYTE-PS 206
+ GEL+ EAL LFR+M+ C + P
Sbjct: 242 ARAGELQ-------------------------------EALELFREMLQQQGCTSSPLPD 270
Query: 207 EITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLF 266
+ T +AVL A + G + + + +H Y + G A V N LID YAKCG + A+++F
Sbjct: 271 DATFVAVLGACARLGALDAGRWVHAYIVRTGRDAAAGVVGNALIDMYAKCGAVEQAAEVF 330
Query: 267 EDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGL 326
+ ++ R+++ ++TS+ISG AMHG G+EA+ FG M++ ++PN VTFL VL+AC H G
Sbjct: 331 D--AMTRRDVYTYTSMISGLAMHGRGEEALALFGDMRQARVRPNEVTFLGVLSACCHAGN 388
Query: 327 VEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTL 386
+E+GL FD M E V P I+HYGC++DMLGRAGRL++AE+ +P D ++W +L
Sbjct: 389 IEDGLRHFDAMAELHGVTPGIEHYGCVVDMLGRAGRLDEAEELVSVMPIR-PDAIIWGSL 447
Query: 387 LGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAF 446
L AC HG+V+ ERV R++ E E GDYVLM N+ A GR G A ++RR M
Sbjct: 448 LAACRAHGHVDRAERVMRRMAEDEDD-AGDYVLMSNMYAQEGRHGKAVQVRRQMRRGKVD 506
Query: 447 KVPGCSLV 454
KVPGCSL+
Sbjct: 507 KVPGCSLI 514
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 119/273 (43%), Gaps = 39/273 (14%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+NT++ ++ A Q+A L++++ Q + SPLP D T+ ++ CA L + G
Sbjct: 234 WNTMISAHARAGELQEALELFREMLQQQGCTSSPLP---DDATFVAVLGACARLGALDAG 290
Query: 94 TQLHAVISKVGFQSHV-YVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVK 152
+HA I + G + V AL++MY G ++ ++++FD M R++ T+ MI+GL
Sbjct: 291 RWVHAYIVRTGRDAAAGVVGNALIDMYAKCGAVEQAAEVFDAMTRRDVYTYTSMISGLAM 350
Query: 153 WGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILA 212
G R EALALF M P+E+T L
Sbjct: 351 HG-------------------------------RGEEALALFGDMRQAR-VRPNEVTFLG 378
Query: 213 VLPAIWQNGDVKS-CQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISV 271
VL A G+++ + E G T I C++D + G + A +L + +
Sbjct: 379 VLSACCHAGNIEDGLRHFDAMAELHGVTP-GIEHYGCVVDMLGRAGRLDEAEELVSVMPI 437
Query: 272 ERKNLVSWTSIISGFAMHGMGKEAVENFGRMQK 304
R + + W S+++ HG A RM +
Sbjct: 438 -RPDAIIWGSLLAACRAHGHVDRAERVMRRMAE 469
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 113/417 (27%), Positives = 165/417 (39%), Gaps = 90/417 (21%)
Query: 78 SFLIRTCATLSHP-NLGTQLHAVISKVG-FQSHVYVNTALVNMYVSLGFLKDSSKLFDEM 135
+ L R AT S P LHA +K+G ++ H V ALV +Y++ G +S LF
Sbjct: 61 AVLKRLAATASAPCEAAPALHAHSAKLGLYRHHRGVRDALVALYLACGRRGVASDLF--- 117
Query: 136 PERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFR 195
+ P +VVSWT ++ + R+ EA LF
Sbjct: 118 -------------------------AGAGGGPAPDVVSWTAMVTWHARLGLFREAAELFL 152
Query: 196 KMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAK 255
M + A A G++ + +H + G A D+ N L+D YAK
Sbjct: 153 AMADDGAVVVDAVAAAAAFAACAGAGELVLAREVHRRVLEAG-VALDVVACNALVDMYAK 211
Query: 256 CGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRM-QKVGLK----PN 310
CG +A + F + V KNLV+W ++IS A G +EA+E F M Q+ G P+
Sbjct: 212 CGDSAAALRCFRTM-VPTKNLVTWNTMISAHARAGELQEALELFREMLQQQGCTSSPLPD 270
Query: 311 RVTFLSVLNACS-----------HG-------------------------GLVEEGLNFF 334
TF++VL AC+ H G VE+ F
Sbjct: 271 DATFVAVLGACARLGALDAGRWVHAYIVRTGRDAAAGVVGNALIDMYAKCGAVEQAAEVF 330
Query: 335 DKMVEECEVLPDIKHYGCLIDMLGRAGRLEQA------EKTALGIPSEITDVVVWRTLLG 388
D M D+ Y +I L GR E+A + A P+E+T + +L
Sbjct: 331 DAMTRR-----DVYTYTSMISGLAMHGRGEEALALFGDMRQARVRPNEVT----FLGVLS 381
Query: 389 ACSFHGNVEMGERVTRKILEMERGYGG--DYVLMYNILAGVGRFGDAERLRRVMDER 443
AC GN+E G R + E+ G Y + ++L GR +AE L VM R
Sbjct: 382 ACCHAGNIEDGLRHFDAMAELHGVTPGIEHYGCVVDMLGRAGRLDEAEELVSVMPIR 438
>gi|242065790|ref|XP_002454184.1| hypothetical protein SORBIDRAFT_04g026300 [Sorghum bicolor]
gi|241934015|gb|EES07160.1| hypothetical protein SORBIDRAFT_04g026300 [Sorghum bicolor]
Length = 530
Score = 250 bits (638), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 138/386 (35%), Positives = 221/386 (57%), Gaps = 7/386 (1%)
Query: 70 PLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSS 129
P + F Y ++R + + + +H+ K GF H + T++++ Y G + D+
Sbjct: 116 PAPNQFVYPLVLRAASGVG-VGIVKSIHSHACKSGFCGHDIIRTSVLDGYSRHGMMADAR 174
Query: 130 KLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNE 189
KLFD + ERN+V+W +++G + G++ A LFE MP R+V +W II G ++ E
Sbjct: 175 KLFDGLTERNVVSWTALVSGYARAGKVGDAIVLFERMPERDVAAWNAIIAGCSQNGLFVE 234
Query: 190 ALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCL 249
A+ +F +MV + P+ T+ VL A G +K +LIH Y R F VLN L
Sbjct: 235 AVGIFGRMVGAGF-RPNATTVSCVLSACGHLGMLKIGKLIHCYA-WRTCVGFGSSVLNGL 292
Query: 250 IDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKP 309
ID Y KCG + A +F+++S ++L +W S+I+ A+HG K A+ F M+ G++P
Sbjct: 293 IDMYGKCGNLEGARWIFDEVS--DRSLTTWNSLINCLALHGHSKCAISVFNEMRGEGVEP 350
Query: 310 NRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKT 369
+ VTF+ +LNAC+HGG V+EG+ +F+ M E + P+I+HYGC+ID+LGRAGR + A
Sbjct: 351 DVVTFVGLLNACTHGGFVDEGIRYFELMQHEHGIEPEIEHYGCIIDLLGRAGRFQDALNV 410
Query: 370 ALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGR 429
+ E D V+W +LL AC H VE E RK+LE++ V++ N+ + G
Sbjct: 411 ISDMRIE-ADEVMWGSLLNACRVHRQVEFAELAIRKLLELDPNNANYVVMLANVYSEGGL 469
Query: 430 FGDAERLRRVMDERN-AFKVPGCSLV 454
+ + ++R+ + E N K+PGCS +
Sbjct: 470 WEEVRKVRKFVKEENIGKKLPGCSWI 495
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 96/361 (26%), Positives = 151/361 (41%), Gaps = 94/361 (26%)
Query: 156 LEFARSLFEEMPCRNVVSWTGII-----------DGYTRMNRSNEALALFRKMVACEYTE 204
L +AR LF+ P +V ++ I+ + +ALALF +M+
Sbjct: 58 LTYARHLFDATPHPSVFLYSAILSAYVSAAATASSYAHAHAHARDALALFLRMLRHGRPA 117
Query: 205 PSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASK 264
P++ VL A G V + IH + K GF DI + ++D Y++ G + A K
Sbjct: 118 PNQFVYPLVLRAASGVG-VGIVKSIHSHACKSGFCGHDI-IRTSVLDGYSRHGMMADARK 175
Query: 265 LFEDISVERKNLVSWTSIISGFA-------------------------------MHGMGK 293
LF+ ++ +N+VSWT+++SG+A +G+
Sbjct: 176 LFDGLT--ERNVVSWTALVSGYARAGKVGDAIVLFERMPERDVAAWNAIIAGCSQNGLFV 233
Query: 294 EAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGC- 352
EAV FGRM G +PN T VL+AC H G+++ G K++ C +G
Sbjct: 234 EAVGIFGRMVGAGFRPNATTVSCVLSACGHLGMLKIG-----KLI-HCYAWRTCVGFGSS 287
Query: 353 ----LIDMLGRAGRLEQAE---------------------------KTALGIPSEI---- 377
LIDM G+ G LE A K A+ + +E+
Sbjct: 288 VLNGLIDMYGKCGNLEGARWIFDEVSDRSLTTWNSLINCLALHGHSKCAISVFNEMRGEG 347
Query: 378 --TDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGD---YVLMYNILAGVGRFGD 432
DVV + LL AC+ G V+ G R ++++ E G + Y + ++L GRF D
Sbjct: 348 VEPDVVTFVGLLNACTHGGFVDEGIRYF-ELMQHEHGIEPEIEHYGCIIDLLGRAGRFQD 406
Query: 433 A 433
A
Sbjct: 407 A 407
>gi|15241448|ref|NP_199236.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170229|sp|Q9FFG8.1|PP417_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g44230
gi|9759524|dbj|BAB10990.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|91806984|gb|ABE66219.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332007694|gb|AED95077.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 657
Score = 250 bits (638), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 136/383 (35%), Positives = 212/383 (55%), Gaps = 6/383 (1%)
Query: 74 SFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFD 133
SFT+S L++ C T+ NLG Q HA ++ VYV +++MYV + + K+FD
Sbjct: 149 SFTFSALLKACGTMKDLNLGRQFHAQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFD 208
Query: 134 EMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALAL 193
EMPER++++W +I + G +E A LFE +P +++V+WT ++ G+ + + EAL
Sbjct: 209 EMPERDVISWTELIAAYARVGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEY 268
Query: 194 FRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVL-NCLIDT 252
F +M E+T+ + A Q G K +K G++ D V+ + LID
Sbjct: 269 FDRMEKSG-IRADEVTVAGYISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDM 327
Query: 253 YAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRM-QKVGLKPNR 311
Y+KCG + A +F +S+ KN+ +++S+I G A HG +EA+ F M + +KPN
Sbjct: 328 YSKCGNVEEAVNVF--MSMNNKNVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNT 385
Query: 312 VTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTAL 371
VTF+ L ACSH GLV++G FD M + V P HY C++D+LGR GRL++A +
Sbjct: 386 VTFVGALMACSHSGLVDQGRQVFDSMYQTFGVQPTRDHYTCMVDLLGRTGRLQEALELIK 445
Query: 372 GIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFG 431
+ E VW LLGAC H N E+ E + E+E G+Y+L+ N+ A G +G
Sbjct: 446 TMSVE-PHGGVWGALLGACRIHNNPEIAEIAAEHLFELEPDIIGNYILLSNVYASAGDWG 504
Query: 432 DAERLRRVMDERNAFKVPGCSLV 454
R+R+++ E+ K P S V
Sbjct: 505 GVLRVRKLIKEKGLKKTPAVSWV 527
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 80/338 (23%), Positives = 141/338 (41%), Gaps = 73/338 (21%)
Query: 95 QLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWG 154
Q+H + + G Y+ T L+ LG D
Sbjct: 67 QIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDP-------------------------- 100
Query: 155 ELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVL 214
+AR + E + RN WT +I GY + +EA+A++ M E T P T A+L
Sbjct: 101 ---YARRVIEPVQFRNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEIT-PVSFTFSALL 156
Query: 215 PAIWQNGDVKSCQLIHGYGEK-RGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDI---- 269
A D+ + H + RGF + V N +ID Y KC I A K+F+++
Sbjct: 157 KACGTMKDLNLGRQFHAQTFRLRGFCF--VYVGNTMIDMYVKCESIDCARKVFDEMPERD 214
Query: 270 -------------------------SVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQK 304
S+ K++V+WT++++GFA + +EA+E F RM+K
Sbjct: 215 VISWTELIAAYARVGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEK 274
Query: 305 VGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEV--LPDIKHY---GCLIDMLGR 359
G++ + VT ++AC+ G + + D+ V+ + H LIDM +
Sbjct: 275 SGIRADEVTVAGYISACAQLGASK----YADRAVQIAQKSGYSPSDHVVIGSALIDMYSK 330
Query: 360 AGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVE 397
G +E+A + + ++ +V + +++ + HG +
Sbjct: 331 CGNVEEAVNVFMSMNNK--NVFTYSSMILGLATHGRAQ 366
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 90/202 (44%), Gaps = 14/202 (6%)
Query: 201 EYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIF 260
E + E+ + +++ + ++ + IHG+ ++G +L LI T K G
Sbjct: 40 EISNQKELLVSSLISKLDDCINLNQIKQIHGHVLRKGLDQ-SCYILTKLIRTLTKLGVPM 98
Query: 261 S--ASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVL 318
A ++ E V+ +N WT++I G+A+ G EA+ +G M+K + P TF ++L
Sbjct: 99 DPYARRVIE--PVQFRNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALL 156
Query: 319 NACSHGGLVEEGLNFFDKMVEE---CEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPS 375
AC + G F + C V +IDM + ++ A K +P
Sbjct: 157 KACGTMKDLNLGRQFHAQTFRLRGFCFVYVG----NTMIDMYVKCESIDCARKVFDEMPE 212
Query: 376 EITDVVVWRTLLGACSFHGNVE 397
DV+ W L+ A + GN+E
Sbjct: 213 R--DVISWTELIAAYARVGNME 232
>gi|225452893|ref|XP_002278719.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15340,
mitochondrial-like [Vitis vinifera]
Length = 632
Score = 249 bits (637), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 135/382 (35%), Positives = 227/382 (59%), Gaps = 4/382 (1%)
Query: 73 DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLF 132
D T L CA L +G Q H + K+G A+++MY G + ++ ++F
Sbjct: 117 DEVTLVCLFGGCARLGDVVVGAQGHGCMVKMGLGGVEKACNAVMDMYAKSGLMGEARRVF 176
Query: 133 DEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALA 192
EM +++V+W V++ G+++ + R +F+EMP RN V+WT +I GY + E+ A
Sbjct: 177 YEMKGQSVVSWTVILDGVIRSEGVRNGRVVFDEMPERNEVAWTIMIAGYLDSGLTQESFA 236
Query: 193 LFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDT 252
L R+M+ E + +T+ ++L A Q+GD+ + +H Y K +I V ++D
Sbjct: 237 LVREMIFDLEMELNYVTLCSILTACSQSGDLMMGRWVHAYALKTKEKELNIMVGTAMVDM 296
Query: 253 YAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRV 312
YAKCG I A K F+ + ++N+VSW +++SG AMHG+G+ A++ F +M K KP+ V
Sbjct: 297 YAKCGRIHIAFKFFKKMP--QRNVVSWNAMLSGLAMHGLGRAALDIFPQMFKEA-KPDDV 353
Query: 313 TFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALG 372
TF SVL+ACSH GLV++G +F + + P ++HY C++D+LGRAGRLE+AE
Sbjct: 354 TFTSVLSACSHSGLVDQGCFYFGNLESVYGITPKVEHYACMVDLLGRAGRLEEAEILVRE 413
Query: 373 IPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGD 432
+P +VV+ +LLG+CS HG +++GE + +++++++ ++L+ N+ A G+
Sbjct: 414 MPIRPNEVVLG-SLLGSCSIHGKLQLGEHLLQELVQLDPQNTEYHILLSNMYALAGKQNR 472
Query: 433 AERLRRVMDERNAFKVPGCSLV 454
A LR+V+ +R KVPG S +
Sbjct: 473 ANSLRQVLKKRGIKKVPGMSSI 494
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 87/350 (24%), Positives = 148/350 (42%), Gaps = 65/350 (18%)
Query: 77 YSFLIRTCATLSHPNLGTQLHAVISKVGFQS--HVYVNTALVNMYVSLGFLKDSSKLFDE 134
Y FL+R+CA S ++G +LHA I G +++ AL+ Y S G + K+FDE
Sbjct: 16 YRFLLRSCARESSLDIGERLHATIITTGIAGAPETFLHNALLQFYASCGCAWQARKVFDE 75
Query: 135 MPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALF 194
+P + ++ V WT ++ + R N S+EAL +F
Sbjct: 76 IPHSH-----------------------------KDTVDWTTLMGCFVRHNVSDEALLIF 106
Query: 195 RKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYA 254
+M C +P E+T++ + + GDV HG K G + + N ++D YA
Sbjct: 107 VEMRRCG-VKPDEVTLVCLFGGCARLGDVVVGAQGHGCMVKMGLGGVE-KACNAVMDMYA 164
Query: 255 KCGCIFSASKLFEDIS-----------------------------VERKNLVSWTSIISG 285
K G + A ++F ++ + +N V+WT +I+G
Sbjct: 165 KSGLMGEARRVFYEMKGQSVVSWTVILDGVIRSEGVRNGRVVFDEMPERNEVAWTIMIAG 224
Query: 286 FAMHGMGKEAVENFGRMQ-KVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVL 344
+ G+ +E+ M + ++ N VT S+L ACS G + G ++ E
Sbjct: 225 YLDSGLTQESFALVREMIFDLEMELNYVTLCSILTACSQSGDLMMGRWVHAYALKTKEKE 284
Query: 345 PDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHG 394
+I ++DM + GR+ A K +P +VV W +L + HG
Sbjct: 285 LNIMVGTAMVDMYAKCGRIHIAFKFFKKMPQR--NVVSWNAMLSGLAMHG 332
>gi|259490042|ref|NP_001159140.1| hypothetical protein [Zea mays]
gi|223942207|gb|ACN25187.1| unknown [Zea mays]
gi|414585730|tpg|DAA36301.1| TPA: hypothetical protein ZEAMMB73_369042 [Zea mays]
Length = 885
Score = 249 bits (637), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 130/381 (34%), Positives = 213/381 (55%), Gaps = 4/381 (1%)
Query: 72 FDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKL 131
D F + LI C + LG QLH++ K G V V+ +L++MY L+ + +
Sbjct: 389 LDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAEAI 448
Query: 132 FDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEAL 191
F M E+++V+W MIT + G + AR F+ M +NV++W ++ Y + + L
Sbjct: 449 FRFMNEKDIVSWTSMITAYSQVGNVAKAREFFDGMSEKNVITWNAMLGAYIQHGAEEDGL 508
Query: 192 ALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLID 251
+++ M++ EY P +T + + G K I G K G D V N +I
Sbjct: 509 RMYKVMLSEEYVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLI-IDTSVANAVIT 567
Query: 252 TYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNR 311
Y+KCG I A K+F+ ++V K++VSW ++I+G++ HGMGK+A+E F + K G KP+
Sbjct: 568 MYSKCGRILEARKVFDFLNV--KDIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDY 625
Query: 312 VTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTAL 371
+++++VL+ CSH GLV+EG +FD M + P ++H+ C++D+LGRAG L +A+
Sbjct: 626 ISYVAVLSGCSHSGLVQEGKFYFDMMKRAHNISPGLEHFSCMVDLLGRAGHLTEAKDLID 685
Query: 372 GIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFG 431
+P + T VW LL AC HGN E+ E + + E++ G Y+LM I A G+
Sbjct: 686 DMPMKPT-AEVWGALLSACKIHGNNELAELAAKHVFELDSPDSGSYMLMAKIYADAGKSD 744
Query: 432 DAERLRRVMDERNAFKVPGCS 452
D+ ++R++M ++ K PG S
Sbjct: 745 DSAQIRKLMRDKGIKKNPGYS 765
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 108/400 (27%), Positives = 180/400 (45%), Gaps = 52/400 (13%)
Query: 73 DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLF 132
++FT + +++C L +L QL A++ K Q V ALV+M+V G + +S+LF
Sbjct: 157 NAFTLACAMKSCGALGWHSLALQLLAMVQKFDSQDDSEVAAALVDMFVRCGAVDLASRLF 216
Query: 133 DEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALA 192
+ E + N M+ G VK ++ A LF+ MP R+VVSW ++ ++ R EAL
Sbjct: 217 VRIKEPTMFCRNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALD 276
Query: 193 LFRKMVAC-----EYTEPSEITILAVLPAI-WQNGDVKSCQLIHGYGEKRGFTAFDIRVL 246
+ M + T S +T A L ++ W G Q+I R D V
Sbjct: 277 MVVDMQSKGVRLDSTTYTSSLTACARLSSLRW--GKQLHAQVI------RNLPHIDPYVA 328
Query: 247 NCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVG 306
+ L++ YAK GC A +F S+ +N V+WT +ISGF +G E+VE F +M+
Sbjct: 329 SALVELYAKSGCFKEAKGVFN--SLHDRNNVAWTVLISGFLQYGCFTESVELFNQMRAEL 386
Query: 307 LKPNRVTFLSVLNACS-----------HGGLVEEGL-------NFFDKMVEECEVL---- 344
+ ++ ++++ C H ++ G N M +C+ L
Sbjct: 387 MTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAE 446
Query: 345 --------PDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNV 396
DI + +I + G + +A + G+ + +V+ W +LGA HG
Sbjct: 447 AIFRFMNEKDIVSWTSMITAYSQVGNVAKAREFFDGMSEK--NVITWNAMLGAYIQHGAE 504
Query: 397 EMGERVTRKILEME--RGYGGDYVLMYNILAGVG--RFGD 432
E G R+ + +L E R YV ++ A +G + GD
Sbjct: 505 EDGLRMYKVMLSEEYVRPDWVTYVTLFKGCADLGANKLGD 544
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 81/350 (23%), Positives = 152/350 (43%), Gaps = 50/350 (14%)
Query: 76 TYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLF-DE 134
++ +R+C LH + VG S V++ L++ Y+S G L D+ +L +
Sbjct: 26 AFADALRSCGARGALAGARALHGRLVAVGLASAVFLQNTLLHAYLSCGALSDARRLLLMD 85
Query: 135 MPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALF 194
+ N++T NVM+ G K G L A LF MP R+V SW ++ GY + + +L F
Sbjct: 86 IAHPNVITHNVMLNGYAKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVSLETF 145
Query: 195 RKMVACEYTEPSEITILAVLPAI----WQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLI 250
M + P+ T+ + + W + ++ ++ + + D V L+
Sbjct: 146 LSMHRSGDSWPNAFTLACAMKSCGALGWHSLALQLLAMVQKFDSQD-----DSEVAAALV 200
Query: 251 DTYAKCGCIFSASKLFEDI-----------------------------SVERKNLVSWTS 281
D + +CG + AS+LF I S+ +++VSW
Sbjct: 201 DMFVRCGAVDLASRLFVRIKEPTMFCRNSMLAGYVKTYGVDHALELFDSMPERDVVSWNM 260
Query: 282 IISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEEC 341
++S + G +EA++ MQ G++ + T+ S L AC+ + G +++
Sbjct: 261 MVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRN- 319
Query: 342 EVLPDIKHY--GCLIDMLGRAGRLEQAEKTALGIPSEITDV--VVWRTLL 387
LP I Y L+++ ++G ++A+ G+ + + D V W L+
Sbjct: 320 --LPHIDPYVASALVELYAKSGCFKEAK----GVFNSLHDRNNVAWTVLI 363
>gi|242042383|ref|XP_002468586.1| hypothetical protein SORBIDRAFT_01g048560 [Sorghum bicolor]
gi|241922440|gb|EER95584.1| hypothetical protein SORBIDRAFT_01g048560 [Sorghum bicolor]
Length = 581
Score = 249 bits (637), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 156/465 (33%), Positives = 248/465 (53%), Gaps = 52/465 (11%)
Query: 29 HHSQLFN-----------TLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTY 77
HHSQL LL F LA P F +L H +P P LF+
Sbjct: 29 HHSQLIRLGVASHPAHARRLLSF--LARDPDSHFPYASRL---LAHHPAPHPALFNPLFS 83
Query: 78 SFLIRTCA--------TLSHPN---------------LGTQLHAVISKVGFQSHVYVNTA 114
+ R A HP+ L QLHA++ K+GF +H A
Sbjct: 84 ALPTRHAARLLALMLSLPLHPDHFTFPRILPGAQPLHLVAQLHALLLKLGFHAHTQSLNA 143
Query: 115 LVNMYVSLGFLKDSSKLF-----DEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCR 169
L+ Y++ +S++F D + ++V+W M+ GLVK G ++ AR LF+ MP R
Sbjct: 144 LLAAYLANARPDLASRVFRGGGGDAL---DVVSWTTMVGGLVKLGRVDDARELFDGMPER 200
Query: 170 NVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLI 229
N+VSW ++ GY + R +AL +F +M A + + + A G + + +
Sbjct: 201 NLVSWNAMMSGYVKTGRFLDALEVFDEMRA-RGVDGNAFVAATAVVACTGAGALARGREV 259
Query: 230 HGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMH 289
H + E+ G D ++ ++D Y KCGC+ A ++FE + + L SW +I GFA+H
Sbjct: 260 HRWVERSGIE-MDDKLATAVVDMYCKCGCVEEAWRVFEALPA--RGLTSWNCMIGGFAVH 316
Query: 290 GMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKH 349
G G++A+ FG M++ G+ P+ VT ++VL AC+H G+V EG ++F+ + + ++P ++H
Sbjct: 317 GRGEDALNLFGLMEREGVAPDDVTLVNVLTACAHAGMVSEGRHYFNYISQRYGIVPKMEH 376
Query: 350 YGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEM 409
YGC++D+ GRAG+LE+A+K +P E DV V L GA HG+V++GE + +++E+
Sbjct: 377 YGCMVDLYGRAGQLEEAKKVIQDMPME-PDVGVLGALFGASKIHGDVDLGEAIGWRVIEL 435
Query: 410 ERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
+ G YVL+ N+LA GR+ D R+RR+MDERN K G S++
Sbjct: 436 DPQNSGRYVLLANLLATAGRWEDVARVRRLMDERNVSKEAGRSVI 480
>gi|125564656|gb|EAZ10036.1| hypothetical protein OsI_32340 [Oryza sativa Indica Group]
Length = 644
Score = 249 bits (637), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 142/421 (33%), Positives = 238/421 (56%), Gaps = 13/421 (3%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+N++++ Y+ A + ++A L++ +++ L D FT L+ C+ + G
Sbjct: 179 WNSMINGYAQAGNTREACSLFEGMRRQGL--------LADEFTLVSLLFACSAEGNLEFG 230
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
+H+ + G + + + ALV+MY G L + FD MP +N V+W M+ L K
Sbjct: 231 KLVHSHLLVRGCRIDLILANALVDMYGKCGDLLMAHTCFDMMPFKNAVSWTSMLCALAKR 290
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
++ AR FE++P ++++SW +I Y + R +EAL L+ +M P E T+ AV
Sbjct: 291 ASIDAARDWFEQIPEKSIISWNAMISCYVQGGRFHEALDLYNRMKLLGLA-PDEFTLAAV 349
Query: 214 LPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVER 273
L A Q GD+ S ++IH + F + + N L+D YA+CG + +A LF ++
Sbjct: 350 LSACGQLGDLASGKMIHDC-IRDNFHNPGVALFNSLLDMYARCGQVDTAISLFSEMP--S 406
Query: 274 KNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNF 333
KN++SW +II AMHG ++A+ F M P+ +TF+++L+AC+HGGL+E G +
Sbjct: 407 KNVISWNAIIGALAMHGRAQDALMFFRSMVSDAFPPDEITFVALLSACNHGGLLEAGQYY 466
Query: 334 FDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFH 393
F M V P ++HY C++D+LGR G+L +A +P DVVVW LLGAC H
Sbjct: 467 FQAMRHVYNVKPGVEHYACMVDLLGRGGQLAKAVDLIKDMPMR-PDVVVWGALLGACRIH 525
Query: 394 GNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSL 453
G++++G++V +++LE+E GG +VL+ N+L ++ D +RLR++M E K G S
Sbjct: 526 GHIQIGKQVIKQLLELEGMSGGLFVLISNMLYETHQWEDMKRLRKLMREWGMKKNMGVSS 585
Query: 454 V 454
+
Sbjct: 586 I 586
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 113/435 (25%), Positives = 189/435 (43%), Gaps = 97/435 (22%)
Query: 11 NNITTQI---HSHLLTTNSLLHHSQLFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSP 67
+++T+QI + L + + QLF+ + P +Y L + Y +SH P
Sbjct: 41 DDVTSQILASYCALPAGGGVWYARQLFDRI---------PDPDRFVYNSLIRAYCNSHCP 91
Query: 68 ---LPPLF---------DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTAL 115
LP L + FT FL++ CA + H V+ K+GF V+V AL
Sbjct: 92 QEALPLLRGMIRRGILPNEFTLPFLLKACARVQAWEHVMVTHGVVVKLGFVGQVFVGNAL 151
Query: 116 VNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWT 175
++ Y S G L DS R F+EM RNVVSW
Sbjct: 152 LHSYASAGSLGDS-------------------------------RRFFDEMVDRNVVSWN 180
Query: 176 GIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEK 235
+I+GY + + EA +LF M + E T++++L A G+++ +L+H +
Sbjct: 181 SMINGYAQAGNTREACSLFEGMRR-QGLLADEFTLVSLLFACSAEGNLEFGKLVHSHLLV 239
Query: 236 RGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDI-------------------------- 269
RG D+ + N L+D Y KCG + A F+ +
Sbjct: 240 RG-CRIDLILANALVDMYGKCGDLLMAHTCFDMMPFKNAVSWTSMLCALAKRASIDAARD 298
Query: 270 ---SVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGL 326
+ K+++SW ++IS + G EA++ + RM+ +GL P+ T +VL+AC G
Sbjct: 299 WFEQIPEKSIISWNAMISCYVQGGRFHEALDLYNRMKLLGLAPDEFTLAAVLSACGQLGD 358
Query: 327 VEEGLNFFDKMVEECEVL----PDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVV 382
+ G KM+ +C P + + L+DM R G+++ A +PS+ +V+
Sbjct: 359 LASG-----KMIHDCIRDNFHNPGVALFNSLLDMYARCGQVDTAISLFSEMPSK--NVIS 411
Query: 383 WRTLLGACSFHGNVE 397
W ++GA + HG +
Sbjct: 412 WNAIIGALAMHGRAQ 426
>gi|347954534|gb|AEP33767.1| organelle transcript processing 82, partial [Matthiola incana]
Length = 694
Score = 249 bits (636), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 143/424 (33%), Positives = 238/424 (56%), Gaps = 44/424 (10%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+N ++ Y + ++A L+K++ + + + P D T ++ CA LG
Sbjct: 189 WNAMISGYVETGNYKEALELFKEMMMM-----TNVRP--DESTMVTVVSACAQSDSIELG 241
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
+H+ I+ GF S++ + AL+++Y K+
Sbjct: 242 RHVHSWINDHGFASNLKIVNALIDLYS-------------------------------KF 270
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
GE+E A LF+ + ++V+SW +I GYT MN EAL LF++M+ T P+++T+L++
Sbjct: 271 GEVETACELFDGLWNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGET-PNDVTMLSI 329
Query: 214 LPAIWQNGDVKSCQLIHGYGEKR--GFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISV 271
LPA G + + IH Y K+ G + LID YAKCG I +A ++F D S+
Sbjct: 330 LPACAHLGAIDIGRWIHVYINKKLKGVVTNVSSLQTSLIDMYAKCGDIDAAQQVF-DSSM 388
Query: 272 ERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGL 331
++L +W ++ISGFAMHG A + F RM+ G++P+ +TF+ +L+ACSH G+++ G
Sbjct: 389 SNRSLSTWNAMISGFAMHGRANAAFDIFSRMRMNGIEPDDITFVGLLSACSHSGMLDLGR 448
Query: 332 NFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACS 391
N F M E+ P ++HYGC+ID+LG +G ++AE+ +P E D V+W +LL AC
Sbjct: 449 NIFRSMTRGYEITPKLEHYGCMIDLLGHSGLFKEAEEMINTMPME-PDGVIWCSLLKACK 507
Query: 392 FHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERN-AFKVPG 450
HGN+E+GE +K++++E G G YVL+ NI A GR+ + ++R +++++ KVPG
Sbjct: 508 IHGNLELGESFAKKLIKIEPGNSGSYVLLSNIYAAAGRWNEVAKIRALLNDKGMKKKVPG 567
Query: 451 CSLV 454
CS +
Sbjct: 568 CSSI 571
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 135/451 (29%), Positives = 229/451 (50%), Gaps = 59/451 (13%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNL 92
++NT+ ++L+ P A LY + S LP DS+T+ FL+++CA
Sbjct: 56 IWNTMFRGHALSSDPVSALKLY-----LVMISLGLLP---DSYTFPFLLKSCAKSKIRKE 107
Query: 93 GTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVK 152
G Q+H + K+GF +YV+T+L++MY G L+D+ K+FD R++V++ +I G V
Sbjct: 108 GQQIHGHVLKLGFDLDIYVHTSLISMYAQNGRLEDARKVFDISSHRDVVSYTALIAGYVS 167
Query: 153 WGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILA 212
G +E A+ LF+E+P ++VVSW +I GY EAL LF++M+ P E T++
Sbjct: 168 RGYIESAQKLFDEIPGKDVVSWNAMISGYVETGNYKEALELFKEMMMMTNVRPDESTMVT 227
Query: 213 VLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVE 272
V+ A Q+ ++ + +H + GF A +++++N LID Y+K G + +A +LF+ +
Sbjct: 228 VVSACAQSDSIELGRHVHSWINDHGF-ASNLKIVNALIDLYSKFGEVETACELFD--GLW 284
Query: 273 RKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGL- 331
K+++SW ++I G+ + KEA+ F M + G PN VT LS+L AC+H G ++ G
Sbjct: 285 NKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRW 344
Query: 332 --NFFDKMVEECEVLPDIKHY-GCLIDMLGRAGRLEQAEK-------------------- 368
+ +K ++ V+ ++ LIDM + G ++ A++
Sbjct: 345 IHVYINKKLK--GVVTNVSSLQTSLIDMYAKCGDIDAAQQVFDSSMSNRSLSTWNAMISG 402
Query: 369 --------TALGIPSEI------TDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYG 414
A I S + D + + LL ACS G +++G + R M RGY
Sbjct: 403 FAMHGRANAAFDIFSRMRMNGIEPDDITFVGLLSACSHSGMLDLGRNIFR---SMTRGYE 459
Query: 415 -----GDYVLMYNILAGVGRFGDAERLRRVM 440
Y M ++L G F +AE + M
Sbjct: 460 ITPKLEHYGCMIDLLGHSGLFKEAEEMINTM 490
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 66/137 (48%), Gaps = 3/137 (2%)
Query: 270 SVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEE 329
+++ NL+ W ++ G A+ A++ + M +GL P+ TF +L +C+ + +E
Sbjct: 48 TIQEPNLLIWNTMFRGHALSSDPVSALKLYLVMISLGLLPDSYTFPFLLKSCAKSKIRKE 107
Query: 330 GLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGA 389
G +++ L DI + LI M + GRLE A K I S DVV + L+
Sbjct: 108 GQQIHGHVLKLGFDL-DIYVHTSLISMYAQNGRLEDARKV-FDISSH-RDVVSYTALIAG 164
Query: 390 CSFHGNVEMGERVTRKI 406
G +E +++ +I
Sbjct: 165 YVSRGYIESAQKLFDEI 181
>gi|326506208|dbj|BAJ86422.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 582
Score = 249 bits (636), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 130/382 (34%), Positives = 209/382 (54%), Gaps = 3/382 (0%)
Query: 73 DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLF 132
D Y+ + CA QLH +K G SH V L++ Y G L D+ K+F
Sbjct: 74 DPIAYALALARCARERAYPAAAQLHGHAAKRGAASHRRVRNGLIHAYSVCGMLFDARKVF 133
Query: 133 DEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALA 192
D PE +++ WN ++ G + + R F +MP R+ VSW +I EA+A
Sbjct: 134 DHGPEVDMIAWNCLLRGYAQGRDTGALREFFAQMPARDSVSWNTVIAWCVANGEHEEAVA 193
Query: 193 LFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDT 252
+FR+M+A +P +T+++V+ AI G + H Y ++ D ++ + LI+
Sbjct: 194 VFREMLASNECQPDRVTLVSVISAIAYLGALAQGLWAHAYVCRKEIE-VDEKLSSALINM 252
Query: 253 YAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRV 312
Y+KCG I A +FE+ S +++ +W ++++GF G + A+E F RM+ G PN++
Sbjct: 253 YSKCGFIEGAVYVFEN-SCALRSVDTWNAMLAGFTASGCSERALELFTRMESSGFVPNKI 311
Query: 313 TFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALG 372
TF ++LNACSHGG VEEG+ +F++M + PDI HYGC++D+ RAG E+AE+
Sbjct: 312 TFNTLLNACSHGGFVEEGIGYFERMTNSSSIEPDIAHYGCMVDLFCRAGLFEKAEEMIQM 371
Query: 373 IPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGD 432
+P E D VW+ L+GAC + N E+G++ +++E YVL+ NI A G +
Sbjct: 372 MPME-PDAAVWKALVGACRTYSNFELGKKAGHRLIEAAPNDHAGYVLLSNIYALDGNWKG 430
Query: 433 AERLRRVMDERNAFKVPGCSLV 454
++R++M KVPG S +
Sbjct: 431 VYKVRKLMLNCGVQKVPGSSSI 452
>gi|297833170|ref|XP_002884467.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330307|gb|EFH60726.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 657
Score = 249 bits (636), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 152/482 (31%), Positives = 257/482 (53%), Gaps = 34/482 (7%)
Query: 1 MHILQNSQTPNNITTQIHSHLLTTNSLLHHSQLFNTLLHFYSLAES---PQKAFLLYKQ- 56
+H+++ S + + QIH H++ + L + L+N+L+ FY S +K F + Q
Sbjct: 136 LHLMKASSFLSEVK-QIHCHIIVSGCLSLGNYLWNSLVKFYMELGSLGFAEKVFAIMPQP 194
Query: 57 ---------------------LQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLGTQ 95
L+ Y + P D +T L+ C LS LG
Sbjct: 195 DVSSFNVMIVGYAKQGFGLEALELYYKMVSDGIEP--DEYTLLGLLVCCGHLSDIRLGKG 252
Query: 96 LHAVISKVG--FQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
+H I + G + S++ + AL++MY + + FD + ++++ +WN M+ G V+
Sbjct: 253 VHGWIERRGPVYSSNLILRNALLDMYFKCKESGLAKRAFDALKKKDMRSWNTMVVGFVRL 312
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEAL-ALFRKMVACEYTEPSEITILA 212
G++E A+++F++MP R++VSW ++ Y++ A+ LF +M+ E +P +T+++
Sbjct: 313 GDMEAAQAVFDQMPQRDLVSWNSLLFCYSKKGCDQRAVRELFYEMLIVEKVKPDRVTMVS 372
Query: 213 VLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVE 272
++ NG++ + +HG + D + + LID Y KCG I A +F+ +
Sbjct: 373 LISGAANNGELSHGRWVHGLMIRLQLEG-DAFLSSALIDMYCKCGLIERAFMVFK--TAT 429
Query: 273 RKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLN 332
K++ WTS+I+GFA HG G++A++ F RMQ+ + PN+VT L+VL ACSH GLVEEGL+
Sbjct: 430 EKDVPLWTSMITGFAFHGYGQQALQLFKRMQEEDVTPNKVTLLAVLTACSHSGLVEEGLH 489
Query: 333 FFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSF 392
F M E+ P+ +HYG L+D+L RAGRLE+A+ +W ++L AC
Sbjct: 490 VFYHMKEKFGFHPETEHYGSLVDLLCRAGRLEEAKDIVQNKMPMRPSQSMWGSILSACRE 549
Query: 393 HGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCS 452
++E E ++L++E G YVL+ NI A VGR+G +++ R M+ R K G S
Sbjct: 550 GEDIETAELALSELLKLEPEKEGGYVLLSNIYATVGRWGYSDKTREAMESRGVKKTAGYS 609
Query: 453 LV 454
V
Sbjct: 610 SV 611
>gi|414585731|tpg|DAA36302.1| TPA: hypothetical protein ZEAMMB73_369042 [Zea mays]
Length = 865
Score = 249 bits (636), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 130/381 (34%), Positives = 213/381 (55%), Gaps = 4/381 (1%)
Query: 72 FDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKL 131
D F + LI C + LG QLH++ K G V V+ +L++MY L+ + +
Sbjct: 369 LDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAEAI 428
Query: 132 FDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEAL 191
F M E+++V+W MIT + G + AR F+ M +NV++W ++ Y + + L
Sbjct: 429 FRFMNEKDIVSWTSMITAYSQVGNVAKAREFFDGMSEKNVITWNAMLGAYIQHGAEEDGL 488
Query: 192 ALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLID 251
+++ M++ EY P +T + + G K I G K G D V N +I
Sbjct: 489 RMYKVMLSEEYVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLI-IDTSVANAVIT 547
Query: 252 TYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNR 311
Y+KCG I A K+F+ ++V K++VSW ++I+G++ HGMGK+A+E F + K G KP+
Sbjct: 548 MYSKCGRILEARKVFDFLNV--KDIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDY 605
Query: 312 VTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTAL 371
+++++VL+ CSH GLV+EG +FD M + P ++H+ C++D+LGRAG L +A+
Sbjct: 606 ISYVAVLSGCSHSGLVQEGKFYFDMMKRAHNISPGLEHFSCMVDLLGRAGHLTEAKDLID 665
Query: 372 GIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFG 431
+P + T VW LL AC HGN E+ E + + E++ G Y+LM I A G+
Sbjct: 666 DMPMKPT-AEVWGALLSACKIHGNNELAELAAKHVFELDSPDSGSYMLMAKIYADAGKSD 724
Query: 432 DAERLRRVMDERNAFKVPGCS 452
D+ ++R++M ++ K PG S
Sbjct: 725 DSAQIRKLMRDKGIKKNPGYS 745
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 108/400 (27%), Positives = 180/400 (45%), Gaps = 52/400 (13%)
Query: 73 DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLF 132
++FT + +++C L +L QL A++ K Q V ALV+M+V G + +S+LF
Sbjct: 137 NAFTLACAMKSCGALGWHSLALQLLAMVQKFDSQDDSEVAAALVDMFVRCGAVDLASRLF 196
Query: 133 DEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALA 192
+ E + N M+ G VK ++ A LF+ MP R+VVSW ++ ++ R EAL
Sbjct: 197 VRIKEPTMFCRNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALD 256
Query: 193 LFRKMVAC-----EYTEPSEITILAVLPAI-WQNGDVKSCQLIHGYGEKRGFTAFDIRVL 246
+ M + T S +T A L ++ W G Q+I R D V
Sbjct: 257 MVVDMQSKGVRLDSTTYTSSLTACARLSSLRW--GKQLHAQVI------RNLPHIDPYVA 308
Query: 247 NCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVG 306
+ L++ YAK GC A +F S+ +N V+WT +ISGF +G E+VE F +M+
Sbjct: 309 SALVELYAKSGCFKEAKGVFN--SLHDRNNVAWTVLISGFLQYGCFTESVELFNQMRAEL 366
Query: 307 LKPNRVTFLSVLNACS-----------HGGLVEEGL-------NFFDKMVEECEVL---- 344
+ ++ ++++ C H ++ G N M +C+ L
Sbjct: 367 MTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAE 426
Query: 345 --------PDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNV 396
DI + +I + G + +A + G+ + +V+ W +LGA HG
Sbjct: 427 AIFRFMNEKDIVSWTSMITAYSQVGNVAKAREFFDGMSEK--NVITWNAMLGAYIQHGAE 484
Query: 397 EMGERVTRKILEME--RGYGGDYVLMYNILAGVG--RFGD 432
E G R+ + +L E R YV ++ A +G + GD
Sbjct: 485 EDGLRMYKVMLSEEYVRPDWVTYVTLFKGCADLGANKLGD 524
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 81/350 (23%), Positives = 152/350 (43%), Gaps = 50/350 (14%)
Query: 76 TYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLF-DE 134
++ +R+C LH + VG S V++ L++ Y+S G L D+ +L +
Sbjct: 6 AFADALRSCGARGALAGARALHGRLVAVGLASAVFLQNTLLHAYLSCGALSDARRLLLMD 65
Query: 135 MPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALF 194
+ N++T NVM+ G K G L A LF MP R+V SW ++ GY + + +L F
Sbjct: 66 IAHPNVITHNVMLNGYAKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVSLETF 125
Query: 195 RKMVACEYTEPSEITILAVLPAI----WQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLI 250
M + P+ T+ + + W + ++ ++ + + D V L+
Sbjct: 126 LSMHRSGDSWPNAFTLACAMKSCGALGWHSLALQLLAMVQKFDSQD-----DSEVAAALV 180
Query: 251 DTYAKCGCIFSASKLFEDI-----------------------------SVERKNLVSWTS 281
D + +CG + AS+LF I S+ +++VSW
Sbjct: 181 DMFVRCGAVDLASRLFVRIKEPTMFCRNSMLAGYVKTYGVDHALELFDSMPERDVVSWNM 240
Query: 282 IISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEEC 341
++S + G +EA++ MQ G++ + T+ S L AC+ + G +++
Sbjct: 241 MVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRN- 299
Query: 342 EVLPDIKHY--GCLIDMLGRAGRLEQAEKTALGIPSEITDV--VVWRTLL 387
LP I Y L+++ ++G ++A+ G+ + + D V W L+
Sbjct: 300 --LPHIDPYVASALVELYAKSGCFKEAK----GVFNSLHDRNNVAWTVLI 343
>gi|345505210|gb|AEN99829.1| chlororespiratory reduction 4, partial [Barbarea verna]
Length = 588
Score = 249 bits (636), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 136/344 (39%), Positives = 208/344 (60%), Gaps = 8/344 (2%)
Query: 113 TALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVV 172
+L++ YV G ++D+ LF MP R++VTW MI G K G + A++LF++MP R+VV
Sbjct: 231 NSLIDGYVKHGRMEDAKDLFYVMPRRDVVTWATMIDGYAKLGFVHKAKTLFDQMPHRDVV 290
Query: 173 SWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGY 232
++ ++ GY + + EAL +F M + P E T++ VL AI Q G + +H Y
Sbjct: 291 AYNSMMAGYVQNKYNMEALEIFSDMEKESHLSPDETTLVIVLSAIAQLGRLSKAMDMHLY 350
Query: 233 -GEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGM 291
EK+ F + V LID Y+KCG I A +FE I E K++ W ++I G A+HG+
Sbjct: 351 IVEKQFFLGGKLGV--ALIDMYSKCGSIQQAMLVFERI--ENKSIDHWNAMIGGLAIHGL 406
Query: 292 GKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYG 351
G+ A + +++ +KP+ +TF+ +LNACSH GLV+EGL F+ M + ++ P ++HYG
Sbjct: 407 GESAFDMLLEIERRSIKPDDITFVGILNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYG 466
Query: 352 CLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMER 411
C++D+L R+G +E A+ +P E D V+WRT L ACS H E GE V + ++ ++
Sbjct: 467 CMVDILSRSGSIELAKNLIEEMPMEPND-VIWRTFLTACSHHKEFETGEVVAKHLI-LQA 524
Query: 412 GYG-GDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
GY YVL+ N+ A G + DA R+R +M ER KVPGCS +
Sbjct: 525 GYNPSSYVLLSNMYASFGMWKDARRVRTMMKERELQKVPGCSWI 568
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 96/342 (28%), Positives = 178/342 (52%), Gaps = 20/342 (5%)
Query: 73 DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLF 132
D F+ S +++ C+ L G Q+H + K G S +++ L+ +Y+ G L + ++F
Sbjct: 95 DKFSLSLVLKACSRLGFVQEGMQIHGFLRKTGIWSDLFLQNCLIGLYLKCGCLGFARQIF 154
Query: 133 DEMPERNLVTWNVMITGLVKWGELEFARSLFEEMP--CRNVVSWTGIIDGYTRMNRSNEA 190
D MP+R+ V++N MI G VK G + AR LF+ MP +N++SW +I GY ++++
Sbjct: 155 DRMPQRDSVSYNSMIDGYVKCGLIGSARELFDLMPKEMKNLISWNSMISGYA---QTSDG 211
Query: 191 LALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLI 250
+ + K+ A E E I+ +++ ++G ++ + + +R D+ +I
Sbjct: 212 VNIASKLFA-EMPEKDLISWNSLIDGYVKHGRMEDAKDLFYVMPRR-----DVVTWATMI 265
Query: 251 DTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVG-LKP 309
D YAK G + A LF+ + +++V++ S+++G+ + EA+E F M+K L P
Sbjct: 266 DGYAKLGFVHKAKTLFDQMP--HRDVVAYNSMMAGYVQNKYNMEALEIFSDMEKESHLSP 323
Query: 310 NRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKT 369
+ T + VL+A + G + + ++ +VE+ L K LIDM + G ++QA
Sbjct: 324 DETTLVIVLSAIAQLGRLSKAMDMHLYIVEKQFFLGG-KLGVALIDMYSKCGSIQQAMLV 382
Query: 370 ALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMER 411
I ++ D W ++G + HG +GE +LE+ER
Sbjct: 383 FERIENKSID--HWNAMIGGLAIHG---LGESAFDMLLEIER 419
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/256 (19%), Positives = 103/256 (40%), Gaps = 40/256 (15%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+N+++ Y + +A ++ +++ S L P D T ++ A L +
Sbjct: 292 YNSMMAGYVQNKYNMEALEIFSDMEK-----ESHLSP--DETTLVIVLSAIAQLGRLSKA 344
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
+H I + F + AL++MY G ++ + +F+ + +++ WN MI GL
Sbjct: 345 MDMHLYIVEKQFFLGGKLGVALIDMYSKCGSIQQAMLVFERIENKSIDHWNAMIGGLAIH 404
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
G E A + E+ R++ +P +IT + +
Sbjct: 405 GLGESAFDMLLEIERRSI--------------------------------KPDDITFVGI 432
Query: 214 LPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVER 273
L A +G VK L ++ ++ C++D ++ G I A L E++ +E
Sbjct: 433 LNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDILSRSGSIELAKNLIEEMPME- 491
Query: 274 KNLVSWTSIISGFAMH 289
N V W + ++ + H
Sbjct: 492 PNDVIWRTFLTACSHH 507
>gi|293336578|ref|NP_001168380.1| uncharacterized protein LOC100382149 [Zea mays]
gi|223947871|gb|ACN28019.1| unknown [Zea mays]
gi|413955892|gb|AFW88541.1| hypothetical protein ZEAMMB73_254585 [Zea mays]
Length = 651
Score = 249 bits (636), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 136/376 (36%), Positives = 219/376 (58%), Gaps = 6/376 (1%)
Query: 80 LIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERN 139
++ CA G H ++ + G S V V L++MY S + + +LFD +
Sbjct: 275 VVAACAKSGVIQNGEVCHGLVVRAGLGSRVNVQNVLIHMYSSCQDVVAARRLFDNGESLD 334
Query: 140 LVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVA 199
+WN MI+G +K G +E A++LF+ MP ++ VSW+ +I G N+S+EAL +F M A
Sbjct: 335 HFSWNSMISGYLKNGRVEDAKALFDVMPDKDNVSWSAMIAGCVHNNQSSEALNVFDSMRA 394
Query: 200 CEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCI 259
E +P ++T+++V+ A ++ +L+H Y K + I + LID Y KCGC+
Sbjct: 395 HE-IKPDDVTLVSVISACSNLSALEQGKLVHEYIRKYQYN-ITIVLGTSLIDMYMKCGCM 452
Query: 260 FSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLK-PNRVTFLSVL 318
+A ++F+ +E K W ++I G AM+G+ +++ F M+ G PN +TF VL
Sbjct: 453 EAALEVFD--MLEEKGTPCWNAVIVGLAMNGLVTRSLDMFSEMEATGTAVPNEITFTGVL 510
Query: 319 NACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEIT 378
+AC HGGLVEEG FF M + +++P+I+HYGC++D+LGRAG + +AE +P
Sbjct: 511 SACRHGGLVEEGRQFFKLMQNKYQIVPNIRHYGCMVDLLGRAGYVREAEDMIQSMPMS-P 569
Query: 379 DVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRR 438
DV W LLGAC HG+ E+GERV +K+++++ + G ++ NI A G + + LR
Sbjct: 570 DVPAWGALLGACWKHGDSEVGERVGKKLVKLDPDHDGFQTMLSNIYASEGMWQCVKDLRG 629
Query: 439 VMDERNAFKVPGCSLV 454
M +++ KV GCS+V
Sbjct: 630 SMKQQHVAKVAGCSMV 645
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 128/526 (24%), Positives = 217/526 (41%), Gaps = 132/526 (25%)
Query: 28 LHHSQLFNTLLHFYSLAESPQKAF----LLYKQLQQIYTHSHSPL----PPLFDSFTYSF 79
LHHS L + L SP AF LL L+Q + H PL P D++T+
Sbjct: 59 LHHS------LQLFGLVRSP-NAFTCNTLLKAALRQGFPHLCFPLYASMPAAPDTYTHPL 111
Query: 80 LIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERN 139
L CA G Q+H+ K GF ++Y+ AL++MY + G + + ++FD P +
Sbjct: 112 LAAACAARGDVREGLQVHSHSVKHGFSDNLYLRNALMHMYSACGCVASARRVFDAGPVWD 171
Query: 140 LVTWNVMITGLVKWGELEFARSLFEEMP-------------------------------C 168
V+WN ++ V+ G++E A +F MP
Sbjct: 172 AVSWNTILATYVRDGDVEQAVKVFTRMPERSAAAVSAMVALFARRGMVEEARGVFDGAEH 231
Query: 169 RNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQL 228
R+ +WT ++ + R + EALA+F M E E +++V+ A ++G +++ ++
Sbjct: 232 RDAFTWTAMVSCFERNDLFMEALAVFSDMRE-EGWPVDEAVMVSVVAACAKSGVIQNGEV 290
Query: 229 IHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFE--------------------- 267
HG + G + + V N LI Y+ C + +A +LF+
Sbjct: 291 CHGLVVRAGLGS-RVNVQNVLIHMYSSCQDVVAARRLFDNGESLDHFSWNSMISGYLKNG 349
Query: 268 ---------DISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVL 318
D+ ++ N VSW+++I+G + EA+ F M+ +KP+ VT +SV+
Sbjct: 350 RVEDAKALFDVMPDKDN-VSWSAMIAGCVHNNQSSEALNVFDSMRAHEIKPDDVTLVSVI 408
Query: 319 NACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQA------------ 366
+ACS+ +E+G + + + + I LIDM + G +E A
Sbjct: 409 SACSNLSALEQG-KLVHEYIRKYQYNITIVLGTSLIDMYMKCGCMEAALEVFDMLEEKGT 467
Query: 367 --------------------------EKTALGIPSEITDVVVWRTLLGACSFHGNVEMGE 400
E T +P+EIT + +L AC G VE G
Sbjct: 468 PCWNAVIVGLAMNGLVTRSLDMFSEMEATGTAVPNEIT----FTGVLSACRHGGLVEEGR 523
Query: 401 RVTR------KILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVM 440
+ + +I+ R YG M ++L G +AE + + M
Sbjct: 524 QFFKLMQNKYQIVPNIRHYG----CMVDLLGRAGYVREAEDMIQSM 565
>gi|115441777|ref|NP_001045168.1| Os01g0912900 [Oryza sativa Japonica Group]
gi|20161377|dbj|BAB90301.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|113534699|dbj|BAF07082.1| Os01g0912900 [Oryza sativa Japonica Group]
gi|125573076|gb|EAZ14591.1| hypothetical protein OsJ_04514 [Oryza sativa Japonica Group]
Length = 533
Score = 249 bits (636), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 145/392 (36%), Positives = 222/392 (56%), Gaps = 9/392 (2%)
Query: 64 SHSPLPPLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVN-TALVNMYVSL 122
+H+ L + SF CA H L + A V S V+ A+V +YV+
Sbjct: 136 AHTALADIAAPDAVSFNSLLCA---HARLASVPDAESLFVAMPSRTQVSWNAMVVVYVNA 192
Query: 123 GFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYT 182
G + + ++FD+MP R+ +W+V+I G K G + AR +F+ MP +N+V+WT +I+GY
Sbjct: 193 GDVSSARRVFDQMPTRDSTSWSVLIVGYCKCGSMRSAREVFDRMPAKNLVAWTAMINGYA 252
Query: 183 RMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFD 242
+ E+LALFR+M A EP T++ V+ A Q G + + Y +K+ D
Sbjct: 253 QSGVPKESLALFREMEAAG-IEPDAATMVGVISAASQIGSTELAGWVGSYVDKKRIERND 311
Query: 243 IRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRM 302
+VL L+D +AKCG + A F +I+ + + +T++ISG A HG K A++ F RM
Sbjct: 312 -KVLTALVDMHAKCGNVDEALSAFREIA--QPDAYPYTALISGLAAHGHAKLALQVFERM 368
Query: 303 QKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGR 362
Q + P+ +TF+ VL ACSH GLV++GL++++ MV+ + HY C++DMLGRAGR
Sbjct: 369 QAQSVWPDPITFVGVLTACSHAGLVDKGLDYWEAMVKYYGMERRADHYACVVDMLGRAGR 428
Query: 363 LEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYN 422
LE+A + +P + LL AC HGNVE+ E V K+ E+E G+Y+++ N
Sbjct: 429 LEEAFEMVQTMPMGPHPGAL-GALLSACKTHGNVEIAEIVANKLFELEPHNTGNYIMLSN 487
Query: 423 ILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
I A ++ +AER+R VM R FK PG S V
Sbjct: 488 IYAEKEQWEEAERIRSVMRTRLPFKQPGSSWV 519
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 81/337 (24%), Positives = 146/337 (43%), Gaps = 51/337 (15%)
Query: 73 DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQS-HVYVNTALVNMYVSLGFLKDSSKL 131
D F+ F + A+L LG LHA+ ++ + V ALV++Y L +
Sbjct: 80 DHFSLPFALNAAASLRLLPLGASLHALALRLALLPCRLPVANALVDLYAKCDDLPAAHTA 139
Query: 132 FDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEAL 191
++ + V++N ++ + + A SLF MP R VSW ++ Y
Sbjct: 140 LADIAAPDAVSFNSLLCAHARLASVPDAESLFVAMPSRTQVSWNAMVVVYV--------- 190
Query: 192 ALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLID 251
GDV S + + R T++ + LI
Sbjct: 191 ---------------------------NAGDVSSARRVFDQMPTRDSTSWSV-----LIV 218
Query: 252 TYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNR 311
Y KCG + SA ++F+ + KNLV+WT++I+G+A G+ KE++ F M+ G++P+
Sbjct: 219 GYCKCGSMRSAREVFDRMPA--KNLVAWTAMINGYAQSGVPKESLALFREMEAAGIEPDA 276
Query: 312 VTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTAL 371
T + V++A S G E + V++ + + K L+DM + G +++ AL
Sbjct: 277 ATMVGVISAASQIGSTELA-GWVGSYVDKKRIERNDKVLTALVDMHAKCGNVDE----AL 331
Query: 372 GIPSEIT--DVVVWRTLLGACSFHGNVEMGERVTRKI 406
EI D + L+ + HG+ ++ +V ++
Sbjct: 332 SAFREIAQPDAYPYTALISGLAAHGHAKLALQVFERM 368
>gi|413932592|gb|AFW67143.1| hypothetical protein ZEAMMB73_912965 [Zea mays]
Length = 619
Score = 249 bits (636), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 147/414 (35%), Positives = 219/414 (52%), Gaps = 57/414 (13%)
Query: 60 IYTHSHSPLP----------PLF-------DSFTYSFLIRTCATLSHPNLGTQLHAVISK 102
I H+ SPLP PL + FT+ FL++ CA P +G Q HA K
Sbjct: 115 IRAHAASPLPSARLRAASFFPLMLRSATLPNKFTFPFLLKACAAF--PGVGVQAHAAALK 172
Query: 103 VGFQSHVYVNTALVNMYVSLG--FLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFAR 160
GF + YV+ L++MY G FL D+ +FD M + + VTW+ MI G
Sbjct: 173 FGFTTDQYVSNTLIHMYSCFGGEFLGDARNVFDRMAKSSAVTWSAMIGG----------- 221
Query: 161 SLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQN 220
Y R S++A+ LFR+M A P E+T++ VL A
Sbjct: 222 --------------------YVRSGLSSDAVGLFREMQA-SGVRPDEVTMIGVLAAAADL 260
Query: 221 GDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWT 280
G ++ + + + EK G + + N LID AKCG + A +F+ ++ + +VSWT
Sbjct: 261 GALELARWVGRFVEKEGIGK-SVTLCNALIDALAKCGDLDGAMAVFQ--GMKERTIVSWT 317
Query: 281 SIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEE 340
S+I AM G GKEAV F M+ G++P+ V F+ VL ACSH G+V+EG +F+ M
Sbjct: 318 SVIDALAMEGRGKEAVAVFEEMKTAGVRPDDVAFIGVLTACSHAGMVDEGYGYFESMRMA 377
Query: 341 CEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGE 400
+ P I+HYGC++DM GRAG +E+A + +P + + ++WRTL+ AC HG +E+GE
Sbjct: 378 YGIDPKIEHYGCMVDMFGRAGMVERAMEFVHKMPMK-PNPIIWRTLVAACRAHGRLELGE 436
Query: 401 RVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
+TR +L + +YV++ N+ A R+ + +RR M +R KVPGCSLV
Sbjct: 437 TITRNLLNEYPAHEANYVMLSNVYALTRRWKEKSEIRREMSKRGIKKVPGCSLV 490
>gi|242050732|ref|XP_002463110.1| hypothetical protein SORBIDRAFT_02g037960 [Sorghum bicolor]
gi|241926487|gb|EER99631.1| hypothetical protein SORBIDRAFT_02g037960 [Sorghum bicolor]
Length = 802
Score = 249 bits (636), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 132/387 (34%), Positives = 219/387 (56%), Gaps = 9/387 (2%)
Query: 72 FDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGF----QSHVYVNTALVNMYVSLGFLKD 127
D FT++ ++ CA G +H I+++ ++ + VN ALV +Y G +
Sbjct: 292 LDEFTFTSVLSACANAGFFAHGKSVHGQITRLQPNFVPEAALPVNNALVTLYSKCGNIAV 351
Query: 128 SSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRS 187
+ ++FD M +++V+WN +++G V+ L+ A +FEEMP +N +SW ++ GY S
Sbjct: 352 ARRIFDNMKSKDVVSWNTILSGYVESSCLDKAVEVFEEMPYKNELSWMVMVSGYVHGGFS 411
Query: 188 NEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLN 247
+AL LF +M A E +P + T + A + G +K + +HG+ + GF + N
Sbjct: 412 EDALKLFNRMRA-EDVKPCDYTYAGAISACGELGSLKHGKQLHGHLVQLGFEGSN-SAGN 469
Query: 248 CLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGL 307
LI YA+CG + A+ +F + + + VSW ++IS HG G+EA+E F RM G+
Sbjct: 470 ALITMYARCGAVKEANLMF--LVMPNIDSVSWNAMISALGQHGHGREALELFDRMVAEGI 527
Query: 308 KPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAE 367
P+R++FL+VL AC+H GLV+EG +F+ M + ++P HY LID+LGRAGR+ +A
Sbjct: 528 YPDRISFLTVLTACNHSGLVDEGFQYFESMKRDFGIIPGEDHYTRLIDLLGRAGRIGEAR 587
Query: 368 KTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGV 427
+P E T +W +L C G++E+G ++ +M + G Y+L+ N +
Sbjct: 588 DLIKTMPFEPTP-SIWEAILSGCRTSGDMELGAHAADQLFKMTPQHDGTYILLSNTYSAA 646
Query: 428 GRFGDAERLRRVMDERNAFKVPGCSLV 454
GR+ DA R+R++M +R K PGCS +
Sbjct: 647 GRWVDAARVRKLMRDRGVKKEPGCSWI 673
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 112/407 (27%), Positives = 187/407 (45%), Gaps = 62/407 (15%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNL 92
L N ++ Y+ A A +++ L + + S P D ++++ L+ L PN+
Sbjct: 123 LHNAVISAYARASHAAPAVAVFRSL--LASGSLRP-----DDYSFTALLSAAGHL--PNI 173
Query: 93 G----TQLHAVISKVGFQSHVYVNTALVNMYV---SLGFLKDSSKLFDEMPERNLVTWNV 145
QL + K G + V+ ALV +Y+ +L +D+ K+ DEMP+++ +TW
Sbjct: 174 SVRHCAQLQCSVLKSGAGGVLSVSNALVALYMKCEALEATRDARKVLDEMPDKDALTWTT 233
Query: 146 MITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEP 205
M+ G V+ G++ ARS+FEE+ + V W +I GY EA LFR+MV E
Sbjct: 234 MVVGYVRRGDVGAARSVFEEVDVKFDVVWNAMISGYVHSGMVVEAFELFRRMV-LERVPL 292
Query: 206 SEITILAVLPAIWQNGDVKSCQLIHGYG---EKRGFTAFDIRVLNCLIDTYAKCGCIFSA 262
E T +VL A G + +HG + + V N L+ Y+KCG I A
Sbjct: 293 DEFTFTSVLSACANAGFFAHGKSVHGQITRLQPNFVPEAALPVNNALVTLYSKCGNIAVA 352
Query: 263 SKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACS 322
++F+++ + K++VSW +I+SG+ +AVE F M N ++++ +++
Sbjct: 353 RRIFDNM--KSKDVVSWNTILSGYVESSCLDKAVEVFEEMP----YKNELSWMVMVSGYV 406
Query: 323 HGGLVEEGLNFFDKMVEE---------------CEVLPDIKH----YG------------ 351
HGG E+ L F++M E C L +KH +G
Sbjct: 407 HGGFSEDALKLFNRMRAEDVKPCDYTYAGAISACGELGSLKHGKQLHGHLVQLGFEGSNS 466
Query: 352 ---CLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGN 395
LI M R G +++A L +P+ D V W ++ A HG+
Sbjct: 467 AGNALITMYARCGAVKEANLMFLVMPN--IDSVSWNAMISALGQHGH 511
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 79/321 (24%), Positives = 133/321 (41%), Gaps = 48/321 (14%)
Query: 108 HVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMP 167
H ++ L+++Y G L ++ LF P V ++ G L A S F+ +P
Sbjct: 58 HPHLTLRLIHLYTLSGDLPAAATLFRADP--CPVAATSLVAAYAAAGRLPAAVSFFDAVP 115
Query: 168 C--RNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQ--NGDV 223
R+ V +I Y R + + A+A+FR ++A P + + A+L A N V
Sbjct: 116 QARRDTVLHNAVISAYARASHAAPAVAVFRSLLASGSLRPDDYSFTALLSAAGHLPNISV 175
Query: 224 KSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKC--------------------------- 256
+ C + K G + V N L+ Y KC
Sbjct: 176 RHCAQLQCSVLKSGAGGV-LSVSNALVALYMKCEALEATRDARKVLDEMPDKDALTWTTM 234
Query: 257 -------GCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKP 309
G + +A +FE++ V K V W ++ISG+ GM EA E F RM +
Sbjct: 235 VVGYVRRGDVGAARSVFEEVDV--KFDVVWNAMISGYVHSGMVVEAFELFRRMVLERVPL 292
Query: 310 NRVTFLSVLNACSHGGLVEEGLNFFDKMVE-ECEVLPD--IKHYGCLIDMLGRAGRLEQA 366
+ TF SVL+AC++ G G + ++ + +P+ + L+ + + G + A
Sbjct: 293 DEFTFTSVLSACANAGFFAHGKSVHGQITRLQPNFVPEAALPVNNALVTLYSKCGNIAVA 352
Query: 367 EKTALGIPSEITDVVVWRTLL 387
+ + S+ DVV W T+L
Sbjct: 353 RRIFDNMKSK--DVVSWNTIL 371
>gi|449520177|ref|XP_004167110.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
Length = 797
Score = 249 bits (635), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 137/393 (34%), Positives = 220/393 (55%), Gaps = 21/393 (5%)
Query: 72 FDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSH----VYVNTALVNMYVSLGFLKD 127
FD TY+ +I CA + +G Q+HA I K + + V+ AL+ +Y + +
Sbjct: 287 FDDITYTTIISACANVGSFQMGKQVHAYILKNELNPNHSFCLSVSNALITLYCKNNKVDE 346
Query: 128 SSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRS 187
+ K+F MP RN++TWN +++G V G +E A+S FEEMP +N+++ T +I G +
Sbjct: 347 ARKIFYAMPVRNIITWNAILSGYVNAGRMEEAKSFFEEMPVKNLLTLTVMISGLAQNGFG 406
Query: 188 NEALALFRKMV-----ACEYTEPSEITILAVLPAIWQNGDVKSCQLIH-GYGEKRGFTAF 241
+E L LF++M C++ +T +VL A+ +NG QL+H GY
Sbjct: 407 DEGLKLFKQMRLDGFEPCDFAFAGALTACSVLGAL-ENGRQLHAQLVHLGYESS------ 459
Query: 242 DIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGR 301
+ V N +I YAKCG + +A +F +++ +LVSW S+I+ HG G +A+E F +
Sbjct: 460 -LSVGNAMISMYAKCGVVEAAESVF--VTMPSVDLVSWNSMIAALGQHGHGVKAIELFDQ 516
Query: 302 MQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAG 361
M K G+ P+R+TFL+VL ACSH GLVE+G ++F+ M+E + P HY ++D+ RAG
Sbjct: 517 MLKEGVFPDRITFLTVLTACSHAGLVEKGRHYFNSMLESYGITPCEDHYARMVDLFCRAG 576
Query: 362 RLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMY 421
A +PS+ VW LL C HGN+++G ++ ++ G YVL+
Sbjct: 577 MFSYARIVIDSMPSK-PGAPVWEALLAGCRIHGNMDLGIEAAEQLFKLMPQNDGTYVLLS 635
Query: 422 NILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
NI A VGR+ + ++R++M ++ K P CS +
Sbjct: 636 NIYADVGRWNEVAKVRKLMRDQAVRKEPACSWI 668
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 107/412 (25%), Positives = 175/412 (42%), Gaps = 58/412 (14%)
Query: 28 LHHSQLFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCAT- 86
+ S +N ++ Y+ A L++ +++ P D FT++ ++
Sbjct: 109 MRDSVFYNAMITGYAHNGDGHSALELFRAMRR------DDFRP--DDFTFTSVLSALVLF 160
Query: 87 LSHPNLGTQLHAVISKVGFQS-HVYVNTALVNMYV--------SLGFLKDSSKLFDEMPE 137
+ + Q+H + K G V AL+++YV S + + KLFDEMP+
Sbjct: 161 VGNEQQCGQMHCAVVKTGMGCVSSSVLNALLSVYVKRASELGISCSAMVSARKLFDEMPK 220
Query: 138 RNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKM 197
R+ +TW MITG V+ +L AR +FE M +W +I GY EAL L RKM
Sbjct: 221 RDELTWTTMITGYVRNDDLNGAREVFEAMVENLGAAWNAMISGYVHCGCFQEALTLCRKM 280
Query: 198 --VACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFT---AFDIRVLNCLIDT 252
+ ++ +IT ++ A G + + +H Y K +F + V N LI
Sbjct: 281 RFLGIQF---DDITYTTIISACANVGSFQMGKQVHAYILKNELNPNHSFCLSVSNALITL 337
Query: 253 YAKCGCIFSASKLFEDISVER-----------------------------KNLVSWTSII 283
Y K + A K+F + V KNL++ T +I
Sbjct: 338 YCKNNKVDEARKIFYAMPVRNIITWNAILSGYVNAGRMEEAKSFFEEMPVKNLLTLTVMI 397
Query: 284 SGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEV 343
SG A +G G E ++ F +M+ G +P F L ACS G +E G ++V
Sbjct: 398 SGLAQNGFGDEGLKLFKQMRLDGFEPCDFAFAGALTACSVLGALENGRQLHAQLV-HLGY 456
Query: 344 LPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGN 395
+ +I M + G +E AE + +PS D+V W +++ A HG+
Sbjct: 457 ESSLSVGNAMISMYAKCGVVEAAESVFVTMPS--VDLVSWNSMIAALGQHGH 506
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 83/353 (23%), Positives = 154/353 (43%), Gaps = 52/353 (14%)
Query: 91 NLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGL 150
+L +HA + GF+ + L+ MY L + +LF+E+P + + +IT
Sbjct: 30 SLARAVHAHMIASGFKPRGHFLNRLLEMYCKSSNLVYARQLFEEIPNPDAIARTTLITAY 89
Query: 151 VKWGELEFARSLFEEMPC--RNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEI 208
G LE R +F P R+ V + +I GY + AL LFR M ++ P +
Sbjct: 90 CALGNLELGREIFNGTPLYMRDSVFYNAMITGYAHNGDGHSALELFRAMRRDDF-RPDDF 148
Query: 209 TILAVLPA-IWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAK--------CGCI 259
T +VL A + G+ + C +H K G VLN L+ Y K C +
Sbjct: 149 TFTSVLSALVLFVGNEQQCGQMHCAVVKTGMGCVSSSVLNALLSVYVKRASELGISCSAM 208
Query: 260 FSASKLFEDIS--------------VERKNL---------------VSWTSIISGFAMHG 290
SA KLF+++ V +L +W ++ISG+ G
Sbjct: 209 VSARKLFDEMPKRDELTWTTMITGYVRNDDLNGAREVFEAMVENLGAAWNAMISGYVHCG 268
Query: 291 MGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHY 350
+EA+ +M+ +G++ + +T+ ++++AC++ G + G +++ E+ P+ H
Sbjct: 269 CFQEALTLCRKMRFLGIQFDDITYTTIISACANVGSFQMGKQVHAYILKN-ELNPN--HS 325
Query: 351 GC------LIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVE 397
C LI + + ++++A K +P + +++ W +L G +E
Sbjct: 326 FCLSVSNALITLYCKNNKVDEARKIFYAMP--VRNIITWNAILSGYVNAGRME 376
>gi|356562016|ref|XP_003549271.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Glycine max]
Length = 705
Score = 249 bits (635), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 146/433 (33%), Positives = 237/433 (54%), Gaps = 40/433 (9%)
Query: 23 TTNSLLHHSQLFNTLLH-FYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLI 81
TT H + LFNTL+ F S A Y +++ H+ SP + FT+ F++
Sbjct: 183 TTPPPSHDAFLFNTLIRAFAQTTHSKPHALRFYNTMRR---HAVSP-----NKFTFPFVL 234
Query: 82 RTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLV 141
+ CA + LG +HA + K GF+ +V LV+MY +D S
Sbjct: 235 KACAGMMRLELGGAVHASMVKFGFEEDPHVRNTLVHMYCCC--CQDGS------------ 280
Query: 142 TWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACE 201
+G V A+ +F+E P ++ V+W+ +I GY R S A+ LFR+M
Sbjct: 281 ------SGPVS------AKKVFDESPVKDSVTWSAMIGGYARAGNSARAVTLFREMQVTG 328
Query: 202 YTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFS 261
P EIT+++VL A G ++ + + Y E++ + + N LID +AKCG +
Sbjct: 329 VC-PDEITMVSVLSACADLGALELGKWLESYIERKNIMR-SVELCNALIDMFAKCGDVDR 386
Query: 262 ASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNAC 321
A K+F ++ V + +VSWTS+I G AMHG G EAV F M + G+ P+ V F+ VL+AC
Sbjct: 387 AVKVFREMKV--RTIVSWTSMIVGLAMHGRGLEAVLVFDEMMEQGVDPDDVAFIGVLSAC 444
Query: 322 SHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVV 381
SH GLV++G +F+ M ++P I+HYGC++DML RAGR+ +A + +P E + V
Sbjct: 445 SHSGLVDKGHYYFNTMENMFSIVPKIEHYGCMVDMLSRAGRVNEALEFVRAMPVE-PNQV 503
Query: 382 VWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMD 441
+WR+++ AC G +++GE V ++++ E + +YVL+ NI A + R+ ++R +MD
Sbjct: 504 IWRSIVTACHARGELKLGESVAKELIRREPSHESNYVLLSNIYAKLLRWEKKTKVREMMD 563
Query: 442 ERNAFKVPGCSLV 454
+ K+PG +++
Sbjct: 564 VKGMRKIPGSTMI 576
>gi|356547105|ref|XP_003541958.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g18970-like [Glycine max]
Length = 477
Score = 249 bits (635), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 145/399 (36%), Positives = 223/399 (55%), Gaps = 50/399 (12%)
Query: 72 FDSFTYSFLIRTCA---TLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDS 128
FD +TY+F++ CA + S +G QLHA I K GF+S++ V T + Y S
Sbjct: 103 FDEYTYNFVLGACARSPSASTLWVGRQLHARIVKHGFESNILVPTTKIYFYAS------- 155
Query: 129 SKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSN 188
+++++ AR +F+EMP R+ V+W +I GY+ N
Sbjct: 156 --------NKDIIS----------------ARRVFDEMPRRSTVTWNAMITGYSSQKEGN 191
Query: 189 E-----ALALFRKM-VACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTA-F 241
+ AL+LF M V +P+ TI++VL A+ Q G +++ IHG+ EK T
Sbjct: 192 KKYALNALSLFIDMLVDVSVIKPTGTTIVSVLSAVSQIGMLETGACIHGFAEKTVCTPED 251
Query: 242 DIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGR 301
D+ + L+D Y+KCGC+ SA +F ++ +KN+++WT++ + A+HG GK+A+E +
Sbjct: 252 DVFIGTGLVDMYSKCGCLDSALSVFWRMN--QKNILTWTAMTTSLAIHGKGKQALEVLYK 309
Query: 302 MQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAG 361
M G+KPN TF S L+AC HGGLVEEGL F +M ++P IKHYGC++D+LGRAG
Sbjct: 310 MGAYGVKPNEATFTSFLSACCHGGLVEEGLILFHEMKRTFGMMPQIKHYGCIVDLLGRAG 369
Query: 362 RLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGG------ 415
LE+A + +P D V+WR+LLGAC HG+V MGE+V + +L++E
Sbjct: 370 NLEEAYDFIMRMPIN-PDAVIWRSLLGACKIHGDVVMGEKVGKFLLQLEEWSSAESPKSE 428
Query: 416 DYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
DY+ + N+ A ++ D E +R+ M + G S V
Sbjct: 429 DYIALSNVYALAEKWDDVEIVRKTMKSKGILSKAGSSAV 467
>gi|224141025|ref|XP_002323875.1| predicted protein [Populus trichocarpa]
gi|222866877|gb|EEF04008.1| predicted protein [Populus trichocarpa]
Length = 442
Score = 249 bits (635), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 146/393 (37%), Positives = 236/393 (60%), Gaps = 22/393 (5%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLS---H 89
+NTL+ Y+ + P + L Q++Q + + P D FT++FLI+ + + +
Sbjct: 62 FYNTLIRGYAKSSIPSYSLHLVNQMRQ------NGVDP--DEFTFNFLIKARSRVRVNIN 113
Query: 90 PNLG-----TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWN 144
NL ++H + K+GF SH++V AL+++Y + G + ++FDE ++V+W+
Sbjct: 114 RNLPLVVECDEIHGAVLKLGFSSHLFVRNALIHLYAARGNPVVAWRVFDETVGVDVVSWS 173
Query: 145 VMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTE 204
++ V+ GELE AR +F++MP R+VVSWT ++ Y++ S EAL L+ M+ +
Sbjct: 174 GLVLAHVRAGELERARWVFDQMPERDVVSWTTMVSAYSQAKYSREALELYVTMLD-KGVR 232
Query: 205 PSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASK 264
P E+T+++V+ A GD++ +H Y ++ GF + + + N LID YAKCGC+ A +
Sbjct: 233 PDEVTLVSVISACTNLGDLQMGYSVHSYIDENGFR-WMVSLCNALIDMYAKCGCMDRAWQ 291
Query: 265 LFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHG 324
+F +S RK+LV+W S+IS A + ++A F RM G+ P+ VTFL+VL A +H
Sbjct: 292 VFNSMS--RKSLVTWNSMISACANNRNPEDAFGLFSRMFNYGVAPDGVTFLAVLTAYAHV 349
Query: 325 GLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWR 384
GLV+EG F+ M + + I+HYGC+++MLG+AG LE+A + +P D VVW
Sbjct: 350 GLVDEGYRLFESMQRDHGIEARIEHYGCVVNMLGQAGWLEEAFELITSMPLPSND-VVWG 408
Query: 385 TLLGACSFHGNVEMGERVTRKILEMERGYGGDY 417
LL AC HG+V MGERV +K+LE++ GG Y
Sbjct: 409 VLLAACRKHGDVYMGERVVKKLLELKLD-GGYY 440
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 133/289 (46%), Gaps = 58/289 (20%)
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
G+L +A+ LF+++P N + +I GY + + + +L L +M +P E T +
Sbjct: 43 GDLAYAQRLFDQLPHPNTFFYNTLIRGYAKSSIPSYSLHLVNQMRQ-NGVDPDEFTFNFL 101
Query: 214 LPA-------IWQNGD-VKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKL 265
+ A I +N V C IHG K GF++ + V N LI YA G A ++
Sbjct: 102 IKARSRVRVNINRNLPLVVECDEIHGAVLKLGFSS-HLFVRNALIHLYAARGNPVVAWRV 160
Query: 266 FEDI-------------------SVER----------KNLVSWTSIISGFAMHGMGKEAV 296
F++ +ER +++VSWT+++S ++ +EA+
Sbjct: 161 FDETVGVDVVSWSGLVLAHVRAGELERARWVFDQMPERDVVSWTTMVSAYSQAKYSREAL 220
Query: 297 ENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGL--------NFFDKMVEECEVLPDIK 348
E + M G++P+ VT +SV++AC++ G ++ G N F MV C
Sbjct: 221 ELYVTMLDKGVRPDEVTLVSVISACTNLGDLQMGYSVHSYIDENGFRWMVSLCN------ 274
Query: 349 HYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVE 397
LIDM + G +++A + + + +V W +++ AC+ + N E
Sbjct: 275 ---ALIDMYAKCGCMDRAWQVFNSMSRK--SLVTWNSMISACANNRNPE 318
>gi|449455172|ref|XP_004145327.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
gi|449474033|ref|XP_004154055.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
gi|449510921|ref|XP_004163811.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
Length = 649
Score = 249 bits (635), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 139/427 (32%), Positives = 237/427 (55%), Gaps = 48/427 (11%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCAT----LS 88
++N L +LA LY ++ + S D FTY++L++ C +S
Sbjct: 137 VWNALFRALALAGRGNDVLELYPRMNMMGVSS--------DRFTYTYLLKACVASECLVS 188
Query: 89 HPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMIT 148
G ++HA I + G+ +HV+V T L++MY
Sbjct: 189 FLQKGKEIHAHILRHGYGAHVHVMTTLMDMYA---------------------------- 220
Query: 149 GLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTE-PSE 207
++G + +A ++F+EMP +NVVSW+ +I Y + + EAL LFR+M+ + P+
Sbjct: 221 ---RFGCVSYASAVFDEMPVKNVVSWSAMIACYAKNGKPYEALELFREMMLNTHDSVPNS 277
Query: 208 ITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFE 267
+T+++VL A ++ +LIH Y +RG + + V++ LI YA+CG + S +F+
Sbjct: 278 VTMVSVLQACAAFAALEQGKLIHAYILRRGLDSI-LPVISALITMYARCGKLESGQLIFD 336
Query: 268 DISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLV 327
+ +K++V W S+IS + +HG G++A++ F M G P+ ++F+SVL ACSH GLV
Sbjct: 337 --RMHKKDVVLWNSLISSYGLHGYGRKAIKIFEEMIDHGFSPSHISFISVLGACSHTGLV 394
Query: 328 EEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLL 387
EEG F+ MV+E + P ++HY C++D+LGRA RL++A K + E VW +LL
Sbjct: 395 EEGKKLFESMVKEHGIQPSVEHYACMVDLLGRANRLDEAAKIIEDLRIE-PGPKVWGSLL 453
Query: 388 GACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFK 447
GAC H +VE+ ER ++++ ++E G+YVL+ +I A + + +R+++++D R K
Sbjct: 454 GACRIHCHVELAERASKRLFKLEPTNAGNYVLLADIYAEAEMWDEVKRVKKLLDSRELQK 513
Query: 448 VPGCSLV 454
VPG S +
Sbjct: 514 VPGRSWI 520
>gi|147798551|emb|CAN72187.1| hypothetical protein VITISV_012899 [Vitis vinifera]
Length = 690
Score = 249 bits (635), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 131/342 (38%), Positives = 202/342 (59%), Gaps = 14/342 (4%)
Query: 113 TALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVV 172
++++ V G ++++ LF+ MP+R++V+W M+ G K GE++ AR LF+EMP R+V+
Sbjct: 313 NSMIDGCVKCGKMENAHHLFNXMPKRDVVSWANMVDGYAKLGEIDIARGLFDEMPERDVI 372
Query: 173 SWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGY 232
S ++ GY + EAL F M++ + P T+L L AI Q G +H Y
Sbjct: 373 SCNAMMAGYVQNGXLMEALXFFHDMLSXKELFPXNATLLITLSAIAQLGHFDEGVALHCY 432
Query: 233 GEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMG 292
E GF+ + ++ LID YAKCG S++ + W +IJ G A+HG+G
Sbjct: 433 IEDNGFSLSE-KLGXALIDMYAKCG------------SIDNALIDHWNAIJXGLAIHGLG 479
Query: 293 KEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGC 352
+ A E F M+K+ +KPB +TF+ VLNAC+H GLV+EGL F M +V P ++HYGC
Sbjct: 480 EVAFELFMEMEKLFVKPBDITFIGVLNACNHAGLVKEGLMXFXLMRXVHKVEPKLQHYGC 539
Query: 353 LIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERG 412
++D+LGRAG +E+ +K +P E D VVWRTLL AC H N +GE V + ++ ++
Sbjct: 540 MVDILGRAGHVEEXKKFVEKMPIEPND-VVWRTLLSACRNHENFTIGEPVAKHLISVDSY 598
Query: 413 YGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
YVL+ NI A G + D R+R +M +R+ K+PGCS +
Sbjct: 599 NPSSYVLLSNIYAXFGMWNDVYRIRMMMKQRDLKKIPGCSQI 640
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 109/444 (24%), Positives = 199/444 (44%), Gaps = 63/444 (14%)
Query: 3 ILQNSQTPNNITTQIHSHLLTTNSLLHHSQLFNTLLHFYSLAESPQKAF----------- 51
+L S+T +++ QIHS L+TT + + S +L+F S + P F
Sbjct: 76 LLPKSKTLHDVN-QIHSRLITTGFINNPSLTTRIILNFSSSSHKPLVEFARYLFMSRHFG 134
Query: 52 ---------LLYKQLQQIYTHSHSPLPPL------------FDSFTYSFLIRTCATLSHP 90
L+ + + ++H P D F++S +++ C+ L
Sbjct: 135 RKHRKQDNPFLWNAIIKSFSHGEDPXEAFXIFNLMLENGVCVDKFSFSLVLKACSRLGLI 194
Query: 91 NLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGL 150
G Q+H ++ + S V++ L+ +Y+ G L + +LFD M R+ V++N MI G
Sbjct: 195 KEGMQIHGLLGXMEIGSDVFLQNCLMCLYLRCGCLGIARQLFDRMMXRDSVSFNSMIDGY 254
Query: 151 VKWGELEFARSLFEEMPC--RNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEI 208
VK G ++ AR LF+ MP +N++SW +I GY RS E L + ++ E + I
Sbjct: 255 VKHGMVKSARELFDVMPMEQKNLISWNSMISGYA---RSEEGLRVAWELFE-EMPKRDLI 310
Query: 209 TILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFED 268
+ +++ + G +++ + KR D+ ++D YAK G I A LF++
Sbjct: 311 SWNSMIDGCVKCGKMENAHHLFNXMPKR-----DVVSWANMVDGYAKLGEIDIARGLFDE 365
Query: 269 ISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVG-LKPNRVTFLSVLNACSHGGLV 327
+ ++++S ++++G+ +G EA+ F M L P T L L+A + G
Sbjct: 366 MP--ERDVISCNAMMAGYVQNGXLMEALXFFHDMLSXKELFPXNATLLITLSAIAQLGHF 423
Query: 328 EEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLL 387
+EG+ + + L + K LIDM + G ++ A + W +J
Sbjct: 424 DEGVALHCYIEDNGFSLSE-KLGXALIDMYAKCGSIDNAL------------IDHWNAIJ 470
Query: 388 GACSFHGNVEMGERVTRKILEMER 411
+ HG +GE +EME+
Sbjct: 471 XGLAIHG---LGEVAFELFMEMEK 491
>gi|15229345|ref|NP_187126.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207287|sp|Q9SR01.1|PP212_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g04750, mitochondrial; Flags: Precursor
gi|6175175|gb|AAF04901.1|AC011437_16 hypothetical protein [Arabidopsis thaliana]
gi|332640610|gb|AEE74131.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 661
Score = 249 bits (635), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 149/468 (31%), Positives = 252/468 (53%), Gaps = 35/468 (7%)
Query: 16 QIHSHLLTTNSLLHHSQLFNTLLHFY------SLAES--------------------PQK 49
QIH H++ + L + L+N+L+ FY +AE ++
Sbjct: 151 QIHCHIIVSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIVGYAKQ 210
Query: 50 AFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVG--FQS 107
F L + L+ + + P D +T L+ C LS LG +H I + G + S
Sbjct: 211 GFSL-EALKLYFKMVSDGIEP--DEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSS 267
Query: 108 HVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMP 167
++ ++ AL++MY + + FD M ++++ +WN M+ G V+ G++E A+++F++MP
Sbjct: 268 NLILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMP 327
Query: 168 CRNVVSWTGIIDGYTRMNRSNEAL-ALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSC 226
R++VSW ++ GY++ + LF +M E +P +T+++++ NG++
Sbjct: 328 KRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHG 387
Query: 227 QLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGF 286
+ +HG + D + + LID Y KCG I A +F+ + K++ WTS+I+G
Sbjct: 388 RWVHGLVIRLQLKG-DAFLSSALIDMYCKCGIIERAFMVFK--TATEKDVALWTSMITGL 444
Query: 287 AMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPD 346
A HG G++A++ FGRMQ+ G+ PN VT L+VL ACSH GLVEEGL+ F+ M ++ P+
Sbjct: 445 AFHGNGQQALQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVEEGLHVFNHMKDKFGFDPE 504
Query: 347 IKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKI 406
+HYG L+D+L RAGR+E+A+ +W ++L AC ++E E ++
Sbjct: 505 TEHYGSLVDLLCRAGRVEEAKDIVQKKMPMRPSQSMWGSILSACRGGEDIETAELALTEL 564
Query: 407 LEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
L++E G YVL+ NI A VGR+G +++ R M+ R K G S V
Sbjct: 565 LKLEPEKEGGYVLLSNIYATVGRWGYSDKTREAMENRGVKKTAGYSSV 612
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 103/401 (25%), Positives = 180/401 (44%), Gaps = 91/401 (22%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNL 92
++NT++ +++ S + F LY + + H SP D T+ +L++ + LS
Sbjct: 102 VYNTMIS--AVSSSKNECFGLYSSMIR---HRVSP-----DRQTFLYLMKASSFLSEVK- 150
Query: 93 GTQLHAVISKVGFQS-HVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLV 151
Q+H I G S Y+ +LV Y+ LG + K+F MP ++ ++NVMI G
Sbjct: 151 --QIHCHIIVSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIVG-- 206
Query: 152 KWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITIL 211
Y + S EAL L+ KMV+ + EP E T+L
Sbjct: 207 -----------------------------YAKQGFSLEALKLYFKMVS-DGIEPDEYTVL 236
Query: 212 AVLPAIWQNGDVKSCQLIHGYGEKRG-FTAFDIRVLNCLIDTYAKC-------------- 256
++L D++ + +HG+ E+RG + ++ + N L+D Y KC
Sbjct: 237 SLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLILSNALLDMYFKCKESGLAKRAFDAMK 296
Query: 257 -----------------GCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAV-EN 298
G + +A +F+ + +++LVSW S++ G++ G + V E
Sbjct: 297 KKDMRSWNTMVVGFVRLGDMEAAQAVFDQMP--KRDLVSWNSLLFGYSKKGCDQRTVREL 354
Query: 299 FGRMQKV-GLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDML 357
F M V +KP+RVT +S+++ ++ G + G + +V ++ D LIDM
Sbjct: 355 FYEMTIVEKVKPDRVTMVSLISGAANNGELSHG-RWVHGLVIRLQLKGDAFLSSALIDMY 413
Query: 358 GRAGRLEQA---EKTALGIPSEITDVVVWRTLLGACSFHGN 395
+ G +E+A KTA DV +W +++ +FHGN
Sbjct: 414 CKCGIIERAFMVFKTATE-----KDVALWTSMITGLAFHGN 449
>gi|347954498|gb|AEP33749.1| chloroplast biogenesis 19, partial [Crucihimalaya wallichii]
Length = 491
Score = 249 bits (635), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 141/384 (36%), Positives = 217/384 (56%), Gaps = 9/384 (2%)
Query: 75 FTYSFLIRTCATL--SHPNLGTQLHAVISKVGF-QSHVYVNTALVNMYVSLGFLKDSSKL 131
T+ L+ C L LH K+G ++HV V TA++ MY G +K + +
Sbjct: 63 ITFIALLSGCGDFPSGSETLSNLLHGYACKLGLDRTHVMVGTAIIGMYSKRGHVKKARLV 122
Query: 132 FDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEAL 191
FD M + N VTWN MI G ++ G+++ A +F++MP R+++SWT +I+G+ + EAL
Sbjct: 123 FDYMEDINSVTWNTMIDGYMRSGQVDNAVKMFDKMPERDLISWTAMINGFVKKGFHEEAL 182
Query: 192 ALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLID 251
FR+M P + I+A L A G + +H Y + F ++RV N LID
Sbjct: 183 VWFREM-QISGVRPDYVAIIAALNACTNLGALSFGLWVHRYVMNQDFKN-NVRVSNSLID 240
Query: 252 TYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNR 311
Y +CGC+ A ++F+ + E++ +VSW S+I GFA +G E++ F +MQ+ G KP+
Sbjct: 241 LYCRCGCVEFAREVFDKM--EKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEEGFKPDA 298
Query: 312 VTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTAL 371
VTF L ACSH GLVEEGL +F M + + P I+HYGCL+D+ RAGRLE A K
Sbjct: 299 VTFTGALTACSHVGLVEEGLRYFQTMKRDYGISPRIEHYGCLVDLYSRAGRLEDALKVIE 358
Query: 372 GIPSEITDVVVWRTLLGACSFHG-NVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRF 430
+P + +VV+ +LL AC HG N + ER+ + + ++ +YV++ N+ A G++
Sbjct: 359 SMPMKPNEVVIG-SLLAACRTHGNNTVLAERLMKHLSDLNVKSHSNYVILSNMYAADGKW 417
Query: 431 GDAERLRRVMDERNAFKVPGCSLV 454
A ++RR M K PG S +
Sbjct: 418 EGASQMRRKMKGLGLKKQPGFSSI 441
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 80/296 (27%), Positives = 127/296 (42%), Gaps = 41/296 (13%)
Query: 172 VSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAI--WQNGDVKSCQLI 229
VSWT I TR R EA F M EP+ IT +A+L + +G L+
Sbjct: 28 VSWTSRITLLTRNGRLAEAAKXFSDM-RLSGVEPNHITFIALLSGCGDFPSGSETLSNLL 86
Query: 230 HGYGEKRGFTAFDIRV-------------------------------LNCLIDTYAKCGC 258
HGY K G + V N +ID Y + G
Sbjct: 87 HGYACKLGLDRTHVMVGTAIIGMYSKRGHVKKARLVFDYMEDINSVTWNTMIDGYMRSGQ 146
Query: 259 IFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVL 318
+ +A K+F+ + ++L+SWT++I+GF G +EA+ F MQ G++P+ V ++ L
Sbjct: 147 VDNAVKMFDKMP--ERDLISWTAMINGFVKKGFHEEALVWFREMQISGVRPDYVAIIAAL 204
Query: 319 NACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEIT 378
NAC++ G + GL + + V + +++ LID+ R G +E A + + E
Sbjct: 205 NACTNLGALSFGL-WVHRYVMNQDFKNNVRVSNSLIDLYCRCGCVEFAREVFDKM--EKR 261
Query: 379 DVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAE 434
VV W +++ + +GN RK+ E G+ D V L G E
Sbjct: 262 TVVSWNSVIVGFAANGNAHESLVYFRKM--QEEGFKPDAVTFTGALTACSHVGLVE 315
>gi|356568696|ref|XP_003552546.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Glycine max]
Length = 604
Score = 249 bits (635), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 166/530 (31%), Positives = 258/530 (48%), Gaps = 95/530 (17%)
Query: 14 TTQIHSHLLTTNSLLHHSQLF--NTLLHFYSLAES-----------PQKAFLLYKQLQQI 60
QIH+ +L N H LF L+ +SL P LY + +
Sbjct: 37 VNQIHAQVLKANL---HQDLFVAPKLIAAFSLCRHLASAVNVFNHVPHPNVHLYNSIIRA 93
Query: 61 YTH--SHSPLP----------PLF-DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQS 107
+ H SH LP LF D+FTY FL++ C+ S L +HA + K+GF
Sbjct: 94 HAHNSSHRSLPFNAFFQMQKNGLFPDNFTYPFLLKACSGPSSLPLVRMIHAHVEKIGFYG 153
Query: 108 HVYVNTALVNMY---------------------------------VSLGFLKDSSKLFDE 134
++V +L++ Y V G L+ + KLFDE
Sbjct: 154 DIFVPNSLIDSYSRCGNAGLDGAMSLFLAMEERDVVTWNSMIGGLVRCGELQGACKLFDE 213
Query: 135 MPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALF 194
MP+R++V+WN M+ G K GE++ A LFE MP RN+VSW+ ++ GY++ + A LF
Sbjct: 214 MPDRDMVSWNTMLDGYAKAGEMDTAFELFERMPWRNIVSWSTMVCGYSKGGDMDMARMLF 273
Query: 195 -------------------RKMVACEYTE-----------PSEITILAVLPAIWQNGDVK 224
K +A E TE P + +L++L A ++G +
Sbjct: 274 DRCPVKNVVLWTTIIAGYAEKGLAREATELYGKMEEAGMRPDDGFLLSILAACAESGMLG 333
Query: 225 SCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIIS 284
+ IH + F +VLN ID YAKCGC+ +A +F + + +K++VSW S+I
Sbjct: 334 LGKRIHASMRRWRFRC-GAKVLNAFIDMYAKCGCLDAAFDVFSGM-MAKKDVVSWNSMIQ 391
Query: 285 GFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVL 344
GFAMHG G++A+E F M + G +P+ TF+ +L AC+H GLV EG +F M + ++
Sbjct: 392 GFAMHGHGEKALELFSWMVQEGFEPDTYTFVGLLCACTHAGLVNEGRKYFYSMEKVYGIV 451
Query: 345 PDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTR 404
P ++HYGC++D+LGR G L++A +P E + ++ TLL AC H +V++ V
Sbjct: 452 PQVEHYGCMMDLLGRGGHLKEAFMLLRSMPME-PNAIILGTLLNACRMHNDVDLARAVCE 510
Query: 405 KILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
++ ++E G+Y L+ NI A G + + +R M K G S +
Sbjct: 511 QLFKLEPSDPGNYSLLSNIYAQAGDWMNVANVRLQMKNTGGEKPSGASSI 560
>gi|242063604|ref|XP_002453091.1| hypothetical protein SORBIDRAFT_04g038305 [Sorghum bicolor]
gi|241932922|gb|EES06067.1| hypothetical protein SORBIDRAFT_04g038305 [Sorghum bicolor]
Length = 514
Score = 249 bits (635), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 154/463 (33%), Positives = 251/463 (54%), Gaps = 35/463 (7%)
Query: 16 QIHSHLLTTNS-LLHHSQLFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLF-- 72
Q+ +HLL++ S LL L N LL + P A L+ +L++I+ P F
Sbjct: 23 QVDAHLLSSFSHLLADRFLPNQLLRSL-IPAHPLGALRLFPRLRRIF--------PDFRP 73
Query: 73 DSFTYSFLIRTCATLSHP-NLGTQ-----------LHAVISKVGFQSHVYVNTALVNMYV 120
+++T+SFL++ A S P +LG LHA+ + + +H YV L++ Y
Sbjct: 74 NNYTFSFLLKAAADSSAPPSLGPDYPFGAHAIVPSLHALAVVLAWDAHAYVANGLIHAYA 133
Query: 121 SLGFLKDSSKLF-DEMPER--NLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGI 177
+ G + + +LF D + R ++ +W ++T K G++E AR+LF+ MP RN V+W+ +
Sbjct: 134 THGVVPSARRLFEDALASRAADVCSWTSLLTACAKAGQVEEARALFDGMPRRNDVAWSAM 193
Query: 178 IDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIH-----GY 232
+ Y ++A+ LF M+ P+ ++ VL A G + + +H G
Sbjct: 194 LSAYVAAGSFDDAVRLFEDMLR-SGVRPNRAAVVGVLAACGALGALDQGRWVHALLVSGT 252
Query: 233 GEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVE-RKNLVSWTSIISGFAMHGM 291
G TA D V L+D YAKCG + +A ++F + ++++ ++T++ISG + HG
Sbjct: 253 HGGDGATAMDGVVATALVDMYAKCGSLDTARQVFAAAAPRSQRDVFAYTAMISGLSDHGR 312
Query: 292 GKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYG 351
EA++ FG+MQ G++PN VTF+ VL AC GLV F M + P ++HYG
Sbjct: 313 CGEAIDLFGQMQAEGVRPNEVTFICVLTACGRAGLVGRAKEVFRSMAAVHGMEPGVEHYG 372
Query: 352 CLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMER 411
CL+D+LGRAG L +A +T + D V LL AC+ HG+VE GE+V R + E+
Sbjct: 373 CLVDVLGRAGLLAEAMETVRSMTMR-PDAYVLGALLNACAAHGDVEAGEQVVRWLAELGL 431
Query: 412 GYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
+ G +V + N+ AG ++ + ++RR MD+R KVPGCS++
Sbjct: 432 DHSGVHVQLSNMYAGWSKWEEVLKVRRTMDQRKVAKVPGCSML 474
>gi|357165485|ref|XP_003580399.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Brachypodium distachyon]
Length = 886
Score = 249 bits (635), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 129/380 (33%), Positives = 215/380 (56%), Gaps = 4/380 (1%)
Query: 73 DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLF 132
D F + LI C LG+QLH++ K G V V+ +L++MY G L+++ +F
Sbjct: 391 DQFALATLISGCCNTMDICLGSQLHSLCLKSGHTRAVVVSNSLISMYAKCGNLQNAELIF 450
Query: 133 DEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALA 192
+ M ER++V+W MIT + G + AR F++M RNV++W ++ Y + + L
Sbjct: 451 NFMAERDIVSWTGMITAYSQVGNIAKAREFFDDMSTRNVITWNAMLGAYIQHGAEEDGLK 510
Query: 193 LFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDT 252
++ M+ + P +T + + G K I G+ K G D V+N +I
Sbjct: 511 MYSDMLTEKDVIPDWVTYVTLFRGCADIGANKLGDQIIGHTVKVGLI-LDTSVVNAVITM 569
Query: 253 YAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRV 312
Y+KCG I A K F+ +S RK+LVSW ++I+G++ HGMGK+A+E F + G KP+ +
Sbjct: 570 YSKCGRISEARKAFDFLS--RKDLVSWNAMITGYSQHGMGKQAIEIFDDILNKGAKPDYI 627
Query: 313 TFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALG 372
++++VL+ CSH GLVEEG +FD M + + P ++H+ C++D+LGRAG L +A+
Sbjct: 628 SYVAVLSGCSHSGLVEEGKFYFDMMKRDHNISPGLEHFSCMVDLLGRAGHLIEAKNLIDE 687
Query: 373 IPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGD 432
+P + T VW LL AC HGN ++ E + + +++ G Y+L+ + A G+ D
Sbjct: 688 MPMKPT-AEVWGALLSACKTHGNNDLAELAAKHLFDLDSPGSGGYMLLAKMYADAGKSDD 746
Query: 433 AERLRRVMDERNAFKVPGCS 452
+ ++R++M ++ K PG S
Sbjct: 747 SAQVRKLMRDKGIKKSPGYS 766
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 94/363 (25%), Positives = 168/363 (46%), Gaps = 14/363 (3%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+NT++ Y + A ++ ++Q + LP ++FT+ ++++C L +
Sbjct: 126 WNTIMSGYYQSGQFLNALDIFVSMRQ----TGDSLP---NAFTFGCVMKSCGALGWHEVA 178
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
QL ++SK Q V TALV+M V G + +SK F + ++ N M+ G K
Sbjct: 179 LQLLGLLSKFDSQDDPDVQTALVDMLVRCGAMDFASKQFSRIKNPTIICRNSMLVGYAKS 238
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
++ A +F+ MP R+VVSW +I ++ R EAL + M + P T +
Sbjct: 239 HGVDHALEIFKSMPERDVVSWNMVISALSKSGRVREALDMVVDMHG-KGVRPDSTTYTSS 297
Query: 214 LPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVER 273
L A + ++ + +H R D V + +++ YAKCGC A ++F S+
Sbjct: 298 LTACARLSSLEWGKQLH-VQVIRNLPHIDPYVASAMVELYAKCGCFKEAKRVFS--SLRD 354
Query: 274 KNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNF 333
+N VSWT +I GF +G E+VE F +M+ + ++ ++++ C + + G
Sbjct: 355 RNSVSWTVLIGGFLQYGCFSESVELFNQMRAELMAVDQFALATLISGCCNTMDICLGSQL 414
Query: 334 FDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFH 393
++ + LI M + G L+ AE +E D+V W ++ A S
Sbjct: 415 HSLCLKSGHTRAVVVS-NSLISMYAKCGNLQNAE-LIFNFMAE-RDIVSWTGMITAYSQV 471
Query: 394 GNV 396
GN+
Sbjct: 472 GNI 474
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 88/345 (25%), Positives = 150/345 (43%), Gaps = 46/345 (13%)
Query: 81 IRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLF-DEMPERN 139
+R+C S LH+ + VG S V++ L++ Y+S G L D+ L DE+ E N
Sbjct: 32 LRSCGARSALTGARTLHSRLINVGLASVVFLQNTLLHAYLSCGALSDARNLLRDEITEPN 91
Query: 140 LVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVA 199
++T N+M+ G K G L A LF MP R+V SW I+ GY + + AL +F M
Sbjct: 92 VITHNIMMNGYAKLGSLSDAVELFGRMPTRDVASWNTIMSGYYQSGQFLNALDIFVSMRQ 151
Query: 200 CEYTEPSEITILAVLPAI----WQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAK 255
+ P+ T V+ + W ++ L+ + + D V L+D +
Sbjct: 152 TGDSLPNAFTFGCVMKSCGALGWHEVALQLLGLLSKFDSQD-----DPDVQTALVDMLVR 206
Query: 256 CGCIFSASKLFEDI-----------------------------SVERKNLVSWTSIISGF 286
CG + ASK F I S+ +++VSW +IS
Sbjct: 207 CGAMDFASKQFSRIKNPTIICRNSMLVGYAKSHGVDHALEIFKSMPERDVVSWNMVISAL 266
Query: 287 AMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPD 346
+ G +EA++ M G++P+ T+ S L AC+ +E G +++ LP
Sbjct: 267 SKSGRVREALDMVVDMHGKGVRPDSTTYTSSLTACARLSSLEWGKQLHVQVIRN---LPH 323
Query: 347 IKHY--GCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGA 389
I Y ++++ + G ++A++ + + V W L+G
Sbjct: 324 IDPYVASAMVELYAKCGCFKEAKRVFSSLRDR--NSVSWTVLIGG 366
>gi|449437737|ref|XP_004136647.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35030,
mitochondrial-like [Cucumis sativus]
Length = 649
Score = 248 bits (634), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 135/385 (35%), Positives = 223/385 (57%), Gaps = 6/385 (1%)
Query: 70 PLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSS 129
P D +++ ++ A LS + K+ ++ V NT ++ Y L ++
Sbjct: 218 PERDVISWTTMV---AGLSKNGRIDDARLLFDKMPVRNVVSWNTMIIG-YAQNMRLDEAF 273
Query: 130 KLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNE 189
KLF++MPER L +WN MITG ++ G+LE A F +M +NVV+WT +I G+ + RS E
Sbjct: 274 KLFEQMPERELSSWNTMITGFIQNGKLERAVDFFYKMSNKNVVTWTAVISGHVQDGRSEE 333
Query: 190 ALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCL 249
AL +F +M A +P+E T ++VL A + + Q IH K + V++ L
Sbjct: 334 ALKIFSEMQAANNVKPNEGTFVSVLGACSKLAALCEGQQIHQIISKTVYQEV-ADVVSAL 392
Query: 250 IDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKP 309
I+ Y+KCG + A K+F+D S+ +++VSW +I+ +A HG G +A+ F MQ +G +P
Sbjct: 393 INMYSKCGELELARKIFDDGSIGHRDVVSWNGMIAAYAHHGHGHKAISLFDEMQALGFRP 452
Query: 310 NRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKT 369
+ VT++++L+ACSH GLV+EGL F+ +V + + H+ CL+D+ GRAGRL++A
Sbjct: 453 DNVTYIALLSACSHAGLVDEGLKLFENLVRDRSIKLREDHFTCLVDLFGRAGRLQEAFDF 512
Query: 370 ALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGR 429
G+ + + VW LL C+ HG++++G+ K+LE E G Y+++ NI A G+
Sbjct: 513 IKGLEVKPS-ASVWAALLAGCNVHGHIDLGKLTAEKLLETEPENAGTYLVLSNIYASTGK 571
Query: 430 FGDAERLRRVMDERNAFKVPGCSLV 454
+ +A +R M ++ K PGCS +
Sbjct: 572 WREAAGVRMKMKDKGLKKQPGCSWI 596
Score = 134 bits (338), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 104/348 (29%), Positives = 164/348 (47%), Gaps = 41/348 (11%)
Query: 113 TALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVV 172
TALV+ YV ++++ +LFD MP +N+++WN MI G + G ++ A LFE+MP RNVV
Sbjct: 133 TALVSGYVRWNRIEEARRLFDAMPVKNVISWNTMIEGYARKGWIDQALDLFEKMPERNVV 192
Query: 173 SWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQL---- 228
SW +I + + R +EA LF +M E I+ ++ + +NG + +L
Sbjct: 193 SWNTVITAFMQRRRVDEAQELFNRM-----PERDVISWTTMVAGLSKNGRIDDARLLFDK 247
Query: 229 ------------IHGYGEK----RGFTAF------DIRVLNCLIDTYAKCGCIFSASKLF 266
I GY + F F ++ N +I + + G + A F
Sbjct: 248 MPVRNVVSWNTMIIGYAQNMRLDEAFKLFEQMPERELSSWNTMITGFIQNGKLERAVDFF 307
Query: 267 EDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKV-GLKPNRVTFLSVLNACSHGG 325
+S KN+V+WT++ISG G +EA++ F MQ +KPN TF+SVL ACS
Sbjct: 308 YKMS--NKNVVTWTAVISGHVQDGRSEEALKIFSEMQAANNVKPNEGTFVSVLGACSKLA 365
Query: 326 LVEEGLNFFDKMVEEC-EVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWR 384
+ EG + + + + D+ LI+M + G LE A K DVV W
Sbjct: 366 ALCEGQQIHQIISKTVYQEVADV--VSALINMYSKCGELELARKIFDDGSIGHRDVVSWN 423
Query: 385 TLLGACSFHGNVEMGERVTRKILEMER-GYGGDYVLMYNILAGVGRFG 431
++ A + HG+ G + EM+ G+ D V +L+ G
Sbjct: 424 GMIAAYAHHGH---GHKAISLFDEMQALGFRPDNVTYIALLSACSHAG 468
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 131/277 (47%), Gaps = 32/277 (11%)
Query: 126 KDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMN 185
K SS + D N+ N +IT L K G++ AR +FEEMP R+VVSWT +I GY +
Sbjct: 52 KISSPVRDFSANSNVARSNWLITQLGKEGKIGEARQVFEEMPDRDVVSWTAVITGYIKCG 111
Query: 186 RSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRV 245
EA LF + A + +T A++ + ++ +R F A ++
Sbjct: 112 MIEEAKTLFDRNDAIKNV----VTWTALVSGYVRWNRIEEA--------RRLFDAMPVKN 159
Query: 246 L---NCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRM 302
+ N +I+ YA+ G I A LFE + +N+VSW ++I+ F EA E F RM
Sbjct: 160 VISWNTMIEGYARKGWIDQALDLFEKMP--ERNVVSWNTVITAFMQRRRVDEAQELFNRM 217
Query: 303 QKVGLKPNR--VTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRA 360
P R +++ +++ S G +++ FDKM + ++ + +I +
Sbjct: 218 ------PERDVISWTTMVAGLSKNGRIDDARLLFDKM-----PVRNVVSWNTMIIGYAQN 266
Query: 361 GRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVE 397
RL++A K +P ++ W T++ +G +E
Sbjct: 267 MRLDEAFKLFEQMPER--ELSSWNTMITGFIQNGKLE 301
>gi|449518887|ref|XP_004166467.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g35030, mitochondrial-like [Cucumis sativus]
Length = 649
Score = 248 bits (634), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 135/385 (35%), Positives = 223/385 (57%), Gaps = 6/385 (1%)
Query: 70 PLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSS 129
P D +++ ++ A LS + K+ ++ V NT ++ Y L ++
Sbjct: 218 PERDVISWTTMV---AGLSKNGRIDDARLLFDKMPVRNVVSWNTMIIG-YAQNMRLDEAF 273
Query: 130 KLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNE 189
KLF++MPER L +WN MITG ++ G+LE A F +M +NVV+WT +I G+ + RS E
Sbjct: 274 KLFEQMPERELSSWNTMITGFIQNGKLERAVDFFYKMSNKNVVTWTAVISGHVQDGRSEE 333
Query: 190 ALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCL 249
AL +F +M A +P+E T ++VL A + + Q IH K + V++ L
Sbjct: 334 ALKIFSEMQAANNVKPNEGTFVSVLGACSKLAALCEGQQIHQIISKTVYQEV-ADVVSAL 392
Query: 250 IDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKP 309
I+ Y+KCG + A K+F+D S+ +++VSW +I+ +A HG G +A+ F MQ +G +P
Sbjct: 393 INMYSKCGELELARKIFDDGSIGHRDVVSWNGMIAAYAHHGHGHKAISLFDEMQALGFRP 452
Query: 310 NRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKT 369
+ VT++++L+ACSH GLV+EGL F+ +V + + H+ CL+D+ GRAGRL++A
Sbjct: 453 DNVTYIALLSACSHAGLVDEGLKLFENLVRDRSIKLREDHFTCLVDLFGRAGRLQEAFDF 512
Query: 370 ALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGR 429
G+ + + VW LL C+ HG++++G+ K+LE E G Y+++ NI A G+
Sbjct: 513 IKGLEVKPS-ASVWAALLAGCNVHGHIDLGKLTAEKLLETEPENAGTYLVLSNIYASTGK 571
Query: 430 FGDAERLRRVMDERNAFKVPGCSLV 454
+ +A +R M ++ K PGCS +
Sbjct: 572 WREAAGVRMKMKDKGLKKQPGCSWI 596
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 104/348 (29%), Positives = 163/348 (46%), Gaps = 41/348 (11%)
Query: 113 TALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVV 172
TALV+ YV ++++ +LFD MP +N+++WN MI G + G ++ A LFE MP RNVV
Sbjct: 133 TALVSGYVRWNRIEEARRLFDAMPVKNVISWNTMIEGYARKGWIDQALDLFEXMPERNVV 192
Query: 173 SWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQL---- 228
SW +I + + R +EA LF +M E I+ ++ + +NG + +L
Sbjct: 193 SWNTVITAFMQRRRVDEAQELFNRM-----PERDVISWTTMVAGLSKNGRIDDARLLFDK 247
Query: 229 ------------IHGYGEK----RGFTAF------DIRVLNCLIDTYAKCGCIFSASKLF 266
I GY + F F ++ N +I + + G + A F
Sbjct: 248 MPVRNVVSWNTMIIGYAQNMRLDEAFKLFEQMPERELSSWNTMITGFIQNGKLERAVDFF 307
Query: 267 EDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKV-GLKPNRVTFLSVLNACSHGG 325
+S KN+V+WT++ISG G +EA++ F MQ +KPN TF+SVL ACS
Sbjct: 308 YKMS--NKNVVTWTAVISGHVQDGRSEEALKIFSEMQAANNVKPNEGTFVSVLGACSKLA 365
Query: 326 LVEEGLNFFDKMVEEC-EVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWR 384
+ EG + + + + D+ LI+M + G LE A K DVV W
Sbjct: 366 ALCEGQQIHQIISKTVYQEVADV--VSALINMYSKCGELELARKIFDDGSIGHRDVVSWN 423
Query: 385 TLLGACSFHGNVEMGERVTRKILEMER-GYGGDYVLMYNILAGVGRFG 431
++ A + HG+ G + EM+ G+ D V +L+ G
Sbjct: 424 GMIAAYAHHGH---GHKAISLFDEMQALGFRPDNVTYIALLSACSHAG 468
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 131/277 (47%), Gaps = 32/277 (11%)
Query: 126 KDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMN 185
K SS + D N+ N +IT L K G++ AR +FEEMP R+VVSWT +I GY +
Sbjct: 52 KISSPVRDFSANSNVARSNWLITQLGKEGKIGEARQVFEEMPDRDVVSWTAVITGYIKCG 111
Query: 186 RSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRV 245
EA LF + A + +T A++ + ++ +R F A ++
Sbjct: 112 MIEEAKTLFDRNDAIKNV----VTWTALVSGYVRWNRIEEA--------RRLFDAMPVKN 159
Query: 246 L---NCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRM 302
+ N +I+ YA+ G I A LFE + +N+VSW ++I+ F EA E F RM
Sbjct: 160 VISWNTMIEGYARKGWIDQALDLFEXMP--ERNVVSWNTVITAFMQRRRVDEAQELFNRM 217
Query: 303 QKVGLKPNR--VTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRA 360
P R +++ +++ S G +++ FDKM + ++ + +I +
Sbjct: 218 ------PERDVISWTTMVAGLSKNGRIDDARLLFDKM-----PVRNVVSWNTMIIGYAQN 266
Query: 361 GRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVE 397
RL++A K +P ++ W T++ +G +E
Sbjct: 267 MRLDEAFKLFEQMPER--ELSSWNTMITGFIQNGKLE 301
>gi|356523586|ref|XP_003530418.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Glycine max]
Length = 604
Score = 248 bits (634), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 169/529 (31%), Positives = 255/529 (48%), Gaps = 93/529 (17%)
Query: 14 TTQIHSHLLTTNSLLHHSQLF--NTLLHFYSLAES-----------PQKAFLLYKQLQQI 60
QIH+ +L N H LF L+ +SL P LY + +
Sbjct: 37 VNQIHAQVLKANL---HQDLFVAPKLIAAFSLCRHLASAVNVFNHVPHPNVHLYNSIIRA 93
Query: 61 YTH--SHSPLP----------PLF-DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQS 107
+ H SH LP LF D+FTY FL++ C S L +HA + K GF
Sbjct: 94 HAHNTSHPSLPFNAFFQMQKNGLFPDNFTYPFLLKACTGPSSLPLVRMIHAHVEKFGFYG 153
Query: 108 HVYVNTALVNMYVSLGF--LKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEE 165
++V +L++ Y G L + LF M ER++VTWN MI GLV+ GELE A LF+E
Sbjct: 154 DIFVPNSLIDSYSRCGSAGLDGAMSLFLAMKERDVVTWNSMIGGLVRCGELEGACKLFDE 213
Query: 166 MPCRNVVSWTGIIDGYTRMNRSNEALALFRKM----------VACEYTEPSEITILAVL- 214
MP R++VSW ++DGY + + A LF +M + C Y++ ++ + VL
Sbjct: 214 MPERDMVSWNTMLDGYAKAGEMDRAFELFERMPQRNIVSWSTMVCGYSKGGDMDMARVLF 273
Query: 215 ---PA----IW--------QNGDVKSCQLIHGYGEKRGFTAFD----------------- 242
PA +W + G V+ ++G E+ G D
Sbjct: 274 DRCPAKNVVLWTTIIAGYAEKGFVREATELYGKMEEAGLRPDDGFLISILAACAESGMLG 333
Query: 243 -----------------IRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISG 285
+VLN ID YAKCGC+ +A +F + + +K++VSW S+I G
Sbjct: 334 LGKRIHASMRRWRFRCGTKVLNAFIDMYAKCGCLDAAFDVFSGM-MAKKDVVSWNSMIQG 392
Query: 286 FAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLP 345
FAMHG G++A+E F RM G +P+ TF+ +L AC+H GLV EG +F M + ++P
Sbjct: 393 FAMHGHGEKALELFSRMVPEGFEPDTYTFVGLLCACTHAGLVNEGRKYFYSMEKVYGIVP 452
Query: 346 DIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRK 405
++HYGC++D+LGR G L++A +P E + ++ TLL AC H +V+ V +
Sbjct: 453 QVEHYGCMMDLLGRGGHLKEAFTLLRSMPME-PNAIILGTLLNACRMHNDVDFARAVCEQ 511
Query: 406 ILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
+ ++E G+Y L+ NI A G + + +R M K G S +
Sbjct: 512 LFKVEPTDPGNYSLLSNIYAQAGDWMNVANVRLQMMNTGGQKPSGASSI 560
>gi|224092370|ref|XP_002309579.1| predicted protein [Populus trichocarpa]
gi|222855555|gb|EEE93102.1| predicted protein [Populus trichocarpa]
Length = 854
Score = 248 bits (634), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 124/382 (32%), Positives = 221/382 (57%), Gaps = 5/382 (1%)
Query: 73 DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLF 132
D ++ C L +LG +HA I G ++ AL+++Y G L ++ + F
Sbjct: 367 DEVALVTVLSACVHLEDFDLGRSVHAFIVTYGMLVDGFLGNALLDLYAKCGKLDEALRTF 426
Query: 133 DEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALA 192
+++P ++ +WN M+ G + G ++ AR F ++P +++VSW +++ Y + + NE+
Sbjct: 427 EQLPCKSAASWNSMLDGFCRSGGVDKARDFFNKIPEKDIVSWNTMVNAYVKHDLFNESFE 486
Query: 193 LFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDT 252
+F KM + +P + T++++L + + G + ++ Y EK D + LID
Sbjct: 487 IFCKMQSSN-VKPDKTTLISLLSSCAKVGALNHGIWVNVYIEKNEI-GIDAMLGTALIDM 544
Query: 253 YAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRV 312
Y KCGC+ A ++F I KN+ WT++++ +AM G EA++ + M++ G+KP+ V
Sbjct: 545 YGKCGCVEMAYEIFTQII--EKNVFVWTAMMAAYAMEGQALEAIDLYLEMEERGVKPDHV 602
Query: 313 TFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALG 372
TF+++L ACSHGGLV+EG +F+K+ ++P I HYGC++D+LGR G LE+ K
Sbjct: 603 TFIALLAACSHGGLVDEGYKYFNKLRSFYNIIPTIHHYGCMVDLLGRVGHLEETVKFIER 662
Query: 373 IPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGD 432
+P E DV +W +L+ AC H NVE+ E+ ++++E++ G +VL+ NI A GR+ D
Sbjct: 663 MPIE-PDVSIWSSLMRACRSHHNVELAEQAFKQLIEIDPTNNGAHVLLSNIYADAGRWDD 721
Query: 433 AERLRRVMDERNAFKVPGCSLV 454
++R + E K PG +++
Sbjct: 722 VSKVRTKLHETGVPKQPGFTMI 743
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 108/422 (25%), Positives = 189/422 (44%), Gaps = 50/422 (11%)
Query: 13 ITTQIHSHLLTTNSL------LHHSQ-----LFNTLLHFYSLAESPQKAFLLYKQL--QQ 59
IT+Q+ + LL+ N+L L +S ++NTLL PQ+ Y + Q
Sbjct: 69 ITSQVLAFLLSVNNLDCAHQILSYSHEPESIIWNTLLENKLKEGCPQEVLECYYHMVTQG 128
Query: 60 IYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMY 119
+ L D T+ FLI C LG+++H I K GF + +N L+ +Y
Sbjct: 129 V----------LLDISTFHFLIHACCKNFDVKLGSEVHGRILKCGFGRNKSLNNNLMGLY 178
Query: 120 VSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIID 179
G LK+ +LF++M R++++WN MI+ V G A LF+EM +VS G++
Sbjct: 179 SKCGKLKEVCQLFEKMTHRDVISWNTMISCYVLKGMYREALDLFDEM----LVS--GVLP 232
Query: 180 GYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQL----------- 228
M A + + + + V +W G + +C +
Sbjct: 233 DEITMVSLVSTCAKLKDL-----EMGKRLHLYIVDNKLWIRGSLLNCLVDMYSKCGKMDE 287
Query: 229 IHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAM 288
HG + + D+ + L+ Y K I A +LF+ ++ ++LVSWT+++SG+
Sbjct: 288 AHGLLSRCDESEVDVVLWTTLVSGYVKSNKIDKARQLFDKMN--ERSLVSWTTMMSGYVQ 345
Query: 289 HGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIK 348
G E++E F +M+ + P+ V ++VL+AC H + G + +V +L D
Sbjct: 346 GGYYCESLELFQQMRFENVIPDEVALVTVLSACVHLEDFDLGRSVHAFIVTY-GMLVDGF 404
Query: 349 HYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILE 408
L+D+ + G+L++A +T +P + W ++L G V+ KI E
Sbjct: 405 LGNALLDLYAKCGKLDEALRTFEQLPCK--SAASWNSMLDGFCRSGGVDKARDFFNKIPE 462
Query: 409 ME 410
+
Sbjct: 463 KD 464
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/282 (20%), Positives = 111/282 (39%), Gaps = 51/282 (18%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+NT+++ Y + ++F ++ ++Q S + P D T L+ +CA + N G
Sbjct: 468 WNTMVNAYVKHDLFNESFEIFCKMQS------SNVKP--DKTTLISLLSSCAKVGALNHG 519
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
++ I K + TAL++MY G ++ + ++F ++ E+N+ W M+
Sbjct: 520 IWVNVYIEKNEIGIDAMLGTALIDMYGKCGCVEMAYEIFTQIIEKNVFVWTAMMAAYAME 579
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
G+ A L+ EM R V +P +T +A+
Sbjct: 580 GQALEAIDLYLEMEERGV--------------------------------KPDHVTFIAL 607
Query: 214 LPAIWQNGDVKSCQLIHGYGEKRGFTAF-----DIRVLNCLIDTYAKCGCIFSASKLFED 268
L A G V GY +F I C++D + G + K E
Sbjct: 608 LAACSHGGLVDE-----GYKYFNKLRSFYNIIPTIHHYGCMVDLLGRVGHLEETVKFIER 662
Query: 269 ISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPN 310
+ +E ++ W+S++ H + A + F ++ ++ N
Sbjct: 663 MPIE-PDVSIWSSLMRACRSHHNVELAEQAFKQLIEIDPTNN 703
>gi|449497589|ref|XP_004160443.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Cucumis sativus]
Length = 776
Score = 248 bits (634), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 137/353 (38%), Positives = 201/353 (56%), Gaps = 28/353 (7%)
Query: 113 TALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVV 172
A++ YV ++ + +LFD+MP RN +WN M+TG + G ++ A+ LF+EMP R+ +
Sbjct: 312 NAMIAGYVQSQQIEKARELFDQMPSRNTSSWNTMVTGYAQCGNIDQAKILFDEMPQRDCI 371
Query: 173 SWTGIIDGYTRMNRSNEALALFRKM-----------VACEYTEPSEITILAVLPAIWQNG 221
SW +I GY + +S EAL LF KM +AC + +EI L +
Sbjct: 372 SWAAMISGYAQSGQSEEALHLFIKMKRDGGILNRSALACALSSCAEIAALEL-------- 423
Query: 222 DVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTS 281
+ +HG K GF I N L+ Y KCG I A +FEDI+ K++VSW +
Sbjct: 424 ----GKQLHGRLVKAGFQTGYI-AGNALLAMYGKCGSIEEAFDVFEDIT--EKDIVSWNT 476
Query: 282 IISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEEC 341
+I+G+A HG GKEA+ F M K+ +KP+ VT + VL+ACSH GLV++G+ +F+ M +
Sbjct: 477 MIAGYARHGFGKEALALFESM-KMTIKPDDVTLVGVLSACSHTGLVDKGMEYFNSMYQNY 535
Query: 342 EVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGER 401
+ + KHY C+ID+LGRAGRL++A +P D W LLGA HG+ E+GE+
Sbjct: 536 GITANAKHYTCMIDLLGRAGRLDEALNLMKSMPF-YPDAATWGALLGASRIHGDTELGEK 594
Query: 402 VTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
K+ EME G YVL+ N+ A GR+ + +R M ++ KVPG S V
Sbjct: 595 AAEKVFEMEPDNSGMYVLLSNLYAASGRWREVREMRSKMRDKGVKKVPGYSWV 647
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 83/282 (29%), Positives = 148/282 (52%), Gaps = 19/282 (6%)
Query: 115 LVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSW 174
L+ YV L D+ LFD MP R+ ++WN+MITG + G L AR LFEE+P R+V +W
Sbjct: 221 LMGGYVRKKRLDDARSLFDRMPVRDKISWNIMITGYAQNGLLSEARRLFEELPIRDVFAW 280
Query: 175 TGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGE 234
T ++ G+ + +EA +F +M E +E++ A++ Q+ ++ + +
Sbjct: 281 TAMVSGFVQNGMLDEATRIFEEM-----PEKNEVSWNAMIAGYVQSQQIEKARELFDQMP 335
Query: 235 KRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKE 294
R +++ N ++ YA+CG I A LF+++ +++ +SW ++ISG+A G +E
Sbjct: 336 SRNTSSW-----NTMVTGYAQCGNIDQAKILFDEMP--QRDCISWAAMISGYAQSGQSEE 388
Query: 295 AVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLI 354
A+ F +M++ G NR L++C+ +E G ++V+ I L+
Sbjct: 389 ALHLFIKMKRDGGILNRSALACALSSCAEIAALELGKQLHGRLVKAGFQTGYIAG-NALL 447
Query: 355 DMLGRAGRLEQAEKTALGIPSEIT--DVVVWRTLLGACSFHG 394
M G+ G +E+ A + +IT D+V W T++ + HG
Sbjct: 448 AMYGKCGSIEE----AFDVFEDITEKDIVSWNTMIAGYARHG 485
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/313 (25%), Positives = 151/313 (48%), Gaps = 48/313 (15%)
Query: 113 TALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVV 172
A+++ Y+S + K+F++MP+R+L++WNVM++G VK G L AR+LF +MP ++VV
Sbjct: 95 NAMISGYLSNNKFDCARKVFEKMPDRDLISWNVMLSGYVKNGNLSAARALFNQMPEKDVV 154
Query: 173 SWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQ----- 227
SW ++ G+ + EA +F +M+ +EI+ +L A QNG ++ +
Sbjct: 155 SWNAMLSGFAQNGFVEEARKIFDQMLV-----KNEISWNGLLSAYVQNGRIEDARRLFDS 209
Query: 228 -----------LIHGYGEKRGFTAFDIRVL------------NCLIDTYAKCGCIFSASK 264
L+ GY K+ D R L N +I YA+ G + A +
Sbjct: 210 KMDWEIVSWNCLMGGYVRKKRLD--DARSLFDRMPVRDKISWNIMITGYAQNGLLSEARR 267
Query: 265 LFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHG 324
LFE++ + +++ +WT+++SGF +GM EA F M + N V++ +++
Sbjct: 268 LFEELPI--RDVFAWTAMVSGFVQNGMLDEATRIFEEMP----EKNEVSWNAMIAGYVQS 321
Query: 325 GLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWR 384
+E+ FD+M + + ++ + G ++QA+ +P D + W
Sbjct: 322 QQIEKARELFDQMPSR-----NTSSWNTMVTGYAQCGNIDQAKILFDEMPQR--DCISWA 374
Query: 385 TLLGACSFHGNVE 397
++ + G E
Sbjct: 375 AMISGYAQSGQSE 387
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 148/313 (47%), Gaps = 48/313 (15%)
Query: 116 VNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWT 175
++ Y+ G + + +F+ M R+ VT+N MI+G + + + AR +FE+MP R+++SW
Sbjct: 67 ISAYMRKGQCESALSVFNGMRRRSTVTYNAMISGYLSNNKFDCARKVFEKMPDRDLISWN 126
Query: 176 GIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQ-------- 227
++ GY + + A ALF +M E ++ A+L QNG V+ +
Sbjct: 127 VMLSGYVKNGNLSAARALFNQM-----PEKDVVSWNAMLSGFAQNGFVEEARKIFDQMLV 181
Query: 228 --------LIHGYGE-------KRGFTA---FDIRVLNCLIDTYAKCGCIFSASKLFEDI 269
L+ Y + +R F + ++I NCL+ Y + + A LF+ +
Sbjct: 182 KNEISWNGLLSAYVQNGRIEDARRLFDSKMDWEIVSWNCLMGGYVRKKRLDDARSLFDRM 241
Query: 270 SVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTF--LSVLNACSHGGLV 327
V K +SW +I+G+A +G+ EA F + P R F ++++ G++
Sbjct: 242 PVRDK--ISWNIMITGYAQNGLLSEARRLFEEL------PIRDVFAWTAMVSGFVQNGML 293
Query: 328 EEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLL 387
+E F++M E+ EV + +I ++ ++E+A + +PS T W T++
Sbjct: 294 DEATRIFEEMPEKNEV-----SWNAMIAGYVQSQQIEKARELFDQMPSRNTS--SWNTMV 346
Query: 388 GACSFHGNVEMGE 400
+ GN++ +
Sbjct: 347 TGYAQCGNIDQAK 359
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 101/227 (44%), Gaps = 39/227 (17%)
Query: 81 IRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNL 140
+ +CA ++ LG QLH + K GFQ+ AL+ MY G ++++ +F+++ E+++
Sbjct: 412 LSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDITEKDI 471
Query: 141 VTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVAC 200
V+WN MI GY R EALALF M
Sbjct: 472 VSWNTMIA-------------------------------GYARHGFGKEALALFESMKMT 500
Query: 201 EYTEPSEITILAVLPAIWQNGDV-KSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCI 259
+P ++T++ VL A G V K + + + G TA + + C+ID + G +
Sbjct: 501 --IKPDDVTLVGVLSACSHTGLVDKGMEYFNSMYQNYGITA-NAKHYTCMIDLLGRAGRL 557
Query: 260 FSASKLFEDISVERKNLVSWTSIISGFAMHG---MGKEAVENFGRMQ 303
A L + + + +W +++ +HG +G++A E M+
Sbjct: 558 DEALNLMKSMPF-YPDAATWGALLGASRIHGDTELGEKAAEKVFEME 603
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 114/266 (42%), Gaps = 54/266 (20%)
Query: 137 ERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRK 196
+ ++V WN I+ ++ G+ E A S+F M R+ V++ +I GY N+ + A +F K
Sbjct: 57 DSDIVKWNRKISAYMRKGQCESALSVFNGMRRRSTVTYNAMISGYLSNNKFDCARKVFEK 116
Query: 197 MVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKC 256
M P D+ N ++ Y K
Sbjct: 117 M-------PDR----------------------------------DLISWNVMLSGYVKN 135
Query: 257 GCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLS 316
G + +A LF + K++VSW +++SGFA +G +EA + F +M L N +++
Sbjct: 136 GNLSAARALFNQMP--EKDVVSWNAMLSGFAQNGFVEEARKIFDQM----LVKNEISWNG 189
Query: 317 VLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSE 376
+L+A G +E+ FD ++ +I + CL+ R RL+ A +P
Sbjct: 190 LLSAYVQNGRIEDARRLFDSKMD-----WEIVSWNCLMGGYVRKKRLDDARSLFDRMP-- 242
Query: 377 ITDVVVWRTLLGACSFHGNVEMGERV 402
+ D + W ++ + +G + R+
Sbjct: 243 VRDKISWNIMITGYAQNGLLSEARRL 268
>gi|357502061|ref|XP_003621319.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496334|gb|AES77537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 605
Score = 248 bits (634), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 153/505 (30%), Positives = 261/505 (51%), Gaps = 71/505 (14%)
Query: 11 NNITTQIHSHLLTTNSLLHHSQLFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPP 70
NN+++ ++ + +H L+N L+ YSL+ + + + L +++
Sbjct: 68 NNLSSAVNVFNQVPDPNVH---LYNYLIRAYSLSGNESNSLCAFGVLLKMHVDG-----V 119
Query: 71 LFDSFTYSFLIRTC-ATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSS 129
L D+FTY FL++ C + S +L +HA + K+GF ++V +L++ Y G ++ +
Sbjct: 120 LADNFTYPFLLKGCNGSSSWLSLVKMVHAHVEKLGFYWDIFVPNSLIDCYCRCGDVEMAM 179
Query: 130 KLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNE 189
K+F M ER++V+WN M+ GLVK G+L+ A +F+EMP R+ VSW ++DG+T+ ++
Sbjct: 180 KVFSGMEERDVVSWNSMVGGLVKNGDLDGALKVFDEMPERDRVSWNTMLDGFTKAGEMDK 239
Query: 190 ALALFRKM----------VACEYTEPSEITILAVL----PA----IW--------QNGDV 223
A LF +M + C Y++ ++ + +L P +W + G V
Sbjct: 240 AFKLFERMAERDIVSWSTMVCGYSKNGDMDMARMLFDRCPVKNLVLWTTIISGYAEKGQV 299
Query: 224 KSCQLIHGYGEKRGFTAFD----------------------------------IRVLNCL 249
K + EK G D +VLN
Sbjct: 300 KEAMNLCDEMEKSGLRLDDGFFISILAACAESGMLGLGKKMHDSFLRSRFRCSTKVLNSF 359
Query: 250 IDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKP 309
ID YAKCGC+ A ++F + E K+LVSW S+I GF +HG G++++E F M + G KP
Sbjct: 360 IDMYAKCGCVDDAFRVFNGMKTE-KDLVSWNSMIHGFGIHGHGEKSIELFNTMVREGFKP 418
Query: 310 NRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKT 369
+R TF+ +L AC+H GLV EG +F M ++P I+HYGC++D+LGR G L++A
Sbjct: 419 DRYTFIGLLCACTHAGLVNEGRGYFYSMQRVYGIVPQIEHYGCMVDLLGRGGHLKEAFWL 478
Query: 370 ALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGR 429
+P E + ++ TLLGAC H +V++ V++ + ++ G++ L+ NI A G
Sbjct: 479 VRSMPFE-PNAIILGTLLGACRMHNDVKLATSVSKYLFKLVPSDPGNFSLLSNIYAQSGD 537
Query: 430 FGDAERLRRVMDERNAFKVPGCSLV 454
+ + ++R+ M++ K G S +
Sbjct: 538 WINVAKVRKQMNDEGGQKPSGVSSI 562
>gi|297794983|ref|XP_002865376.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297311211|gb|EFH41635.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 658
Score = 248 bits (634), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 134/383 (34%), Positives = 213/383 (55%), Gaps = 6/383 (1%)
Query: 74 SFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFD 133
SFT+S L++ C ++ NLG Q HA ++ VYV +++MYV G + + K+FD
Sbjct: 150 SFTFSALLKACGSMGDLNLGRQFHAQTFRLRGFCFVYVGNTMIDMYVKCGSIVCARKVFD 209
Query: 134 EMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALAL 193
EMPER++++W +I + G +E A LFE +P +++V+WT ++ G+ + + EAL
Sbjct: 210 EMPERDVISWTELIAAYARVGNMESAADLFESLPTKDMVAWTAMVTGFAQNAKPQEALEY 269
Query: 194 FRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVL-NCLIDT 252
F +M E+T+ + A Q G K +K G++ D V+ + LID
Sbjct: 270 FDRMEKSG-IRADEVTVAGYISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDM 328
Query: 253 YAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRM-QKVGLKPNR 311
Y+KCG + A +F +S+ KN+ S++S+I G A HG +EA++ F M + +KPN
Sbjct: 329 YSKCGNVEEAVNVF--VSMNNKNVFSYSSMILGLATHGRAQEALDLFHYMVTQTAIKPNT 386
Query: 312 VTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTAL 371
VTF+ L ACSH GLV++G F M + V P HY C++D+LGRAGRL++A +
Sbjct: 387 VTFVGALTACSHSGLVDQGRQVFASMYQTFGVEPTRDHYTCMVDLLGRAGRLQEALELIK 446
Query: 372 GIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFG 431
+ E VW LLGAC H N ++ E + E+E G+Y+L+ N+ + G +G
Sbjct: 447 TMSVE-PHGGVWGALLGACRIHNNPDIAEIAAEHLFELEPDIIGNYILLSNVYSSAGDWG 505
Query: 432 DAERLRRVMDERNAFKVPGCSLV 454
+R+++ E+ K P S V
Sbjct: 506 GVLSVRKLIKEKGLKKTPAVSWV 528
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 105/426 (24%), Positives = 166/426 (38%), Gaps = 125/426 (29%)
Query: 95 QLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWG 154
Q+H + + G Y+ T L+ LG D
Sbjct: 68 QIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDP-------------------------- 101
Query: 155 ELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVL 214
+ R + E + RN WT +I GYT + +EA+A++ M E T P T A+L
Sbjct: 102 ---YPRRVIEPVQFRNPFLWTAVIRGYTIEGKFDEAIAMYGCMRKEEIT-PVSFTFSALL 157
Query: 215 PAIWQNGDVKSCQLIHGYGEK-RGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDI---- 269
A GD+ + H + RGF + V N +ID Y KCG I A K+F+++
Sbjct: 158 KACGSMGDLNLGRQFHAQTFRLRGFCF--VYVGNTMIDMYVKCGSIVCARKVFDEMPERD 215
Query: 270 -------------------------SVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQK 304
S+ K++V+WT++++GFA + +EA+E F RM+K
Sbjct: 216 VISWTELIAAYARVGNMESAADLFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEK 275
Query: 305 VGLKPNRVTFLSVLNAC-------------------------------------SHGGLV 327
G++ + VT ++AC S G V
Sbjct: 276 SGIRADEVTVAGYISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNV 335
Query: 328 EEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQA--------EKTALGIPSEITD 379
EE +N F M + ++ Y +I L GR ++A +TA+ P+ +T
Sbjct: 336 EEAVNVFVSMNNK-----NVFSYSSMILGLATHGRAQEALDLFHYMVTQTAIK-PNTVTF 389
Query: 380 VVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGD-----YVLMYNILAGVGRFGDAE 434
V L ACS G V+ G +V M + +G + Y M ++L GR +A
Sbjct: 390 V----GALTACSHSGLVDQGRQV---FASMYQTFGVEPTRDHYTCMVDLLGRAGRLQEAL 442
Query: 435 RLRRVM 440
L + M
Sbjct: 443 ELIKTM 448
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 86/200 (43%), Gaps = 10/200 (5%)
Query: 201 EYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIF 260
E + E+ + +++ + ++ + IHG+ ++G +L LI T K G
Sbjct: 41 EISHQRELLVSSLISKLDDCINLNQIKQIHGHVLRKGLDQ-SCYILTKLIRTLTKLGVPM 99
Query: 261 SASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNA 320
V+ +N WT++I G+ + G EA+ +G M+K + P TF ++L A
Sbjct: 100 DPYPRRVIEPVQFRNPFLWTAVIRGYTIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKA 159
Query: 321 CSHGGLVEEGLNFFDKMVEE---CEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEI 377
C G + G F + C V +IDM + G + A K +P
Sbjct: 160 CGSMGDLNLGRQFHAQTFRLRGFCFVYVG----NTMIDMYVKCGSIVCARKVFDEMPER- 214
Query: 378 TDVVVWRTLLGACSFHGNVE 397
DV+ W L+ A + GN+E
Sbjct: 215 -DVISWTELIAAYARVGNME 233
>gi|125528817|gb|EAY76931.1| hypothetical protein OsI_04889 [Oryza sativa Indica Group]
Length = 565
Score = 248 bits (633), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 132/340 (38%), Positives = 205/340 (60%), Gaps = 5/340 (1%)
Query: 114 ALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVS 173
A+V +YV+ G + + ++FD+MP R+ +W+V+I G K G + AR +F+ MP +N+V+
Sbjct: 184 AMVVVYVNAGDVSSARRVFDQMPTRDSTSWSVLIVGYCKCGSMRSAREVFDRMPAKNLVA 243
Query: 174 WTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYG 233
WT +I+GY + E+LALFR+M A EP T++ V+ A Q G + + Y
Sbjct: 244 WTAMINGYAQSGVPKESLALFREMEAAG-IEPDAATMVGVISAASQIGSTELAGWVGSYV 302
Query: 234 EKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGK 293
+K+ D +VL L+D +AKCG + A F +I+ + + +T++ISG A HG K
Sbjct: 303 DKKRIERND-KVLTALVDMHAKCGNVDEALSAFREIA--QPDAYPYTALISGLAAHGHAK 359
Query: 294 EAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCL 353
A++ F RMQ + P+ +TF+ VL ACSH GLV++GL++++ MV+ + HY C+
Sbjct: 360 LALQVFERMQAQSVWPDPITFVGVLTACSHAGLVDKGLDYWEAMVKYYGMERRADHYACV 419
Query: 354 IDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGY 413
+DMLGRAGRLE+A + +P + LL AC HGNVE+ E V K+ E+E
Sbjct: 420 VDMLGRAGRLEEAFEMVQTMPMGPHPGAL-GALLSACKTHGNVEIAEIVANKLFELEPHN 478
Query: 414 GGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSL 453
G+Y+++ NI A ++ +AER+R VM R FK PG S+
Sbjct: 479 TGNYIMLSNIYAEKEQWEEAERIRSVMRTRVPFKQPGSSM 518
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 81/337 (24%), Positives = 146/337 (43%), Gaps = 51/337 (15%)
Query: 73 DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQS-HVYVNTALVNMYVSLGFLKDSSKL 131
D F+ F + A+L LG LHA+ ++ + V ALV++Y L +
Sbjct: 80 DHFSLPFALNAAASLRLLPLGASLHALALRLALLPGRLPVANALVDLYAKCDDLPAAHTA 139
Query: 132 FDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEAL 191
++ + V++N ++ + + A SLF MP R VSW ++ Y
Sbjct: 140 LADIAAPDAVSFNSLLCAHARLASVPDAESLFAAMPSRTQVSWNAMVVVYV--------- 190
Query: 192 ALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLID 251
GDV S + + R T++ + LI
Sbjct: 191 ---------------------------NAGDVSSARRVFDQMPTRDSTSWSV-----LIV 218
Query: 252 TYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNR 311
Y KCG + SA ++F+ + KNLV+WT++I+G+A G+ KE++ F M+ G++P+
Sbjct: 219 GYCKCGSMRSAREVFDRMPA--KNLVAWTAMINGYAQSGVPKESLALFREMEAAGIEPDA 276
Query: 312 VTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTAL 371
T + V++A S G E + V++ + + K L+DM + G +++ AL
Sbjct: 277 ATMVGVISAASQIGSTELA-GWVGSYVDKKRIERNDKVLTALVDMHAKCGNVDE----AL 331
Query: 372 GIPSEIT--DVVVWRTLLGACSFHGNVEMGERVTRKI 406
EI D + L+ + HG+ ++ +V ++
Sbjct: 332 SAFREIAQPDAYPYTALISGLAAHGHAKLALQVFERM 368
>gi|357153087|ref|XP_003576334.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g18840-like [Brachypodium distachyon]
Length = 531
Score = 248 bits (633), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 145/450 (32%), Positives = 243/450 (54%), Gaps = 43/450 (9%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSP-LPPLFDSFTYSFLIRTCATLSHPN 91
L++ + + + P + ++ ++ ++ + P P L S +F + A
Sbjct: 80 LYSPAISALASSPCPAASLAVFNRVSRLSLPTPLPAFPALLKSCARAFGLCAAADGGGEG 139
Query: 92 L---GTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMIT 148
G +LH + K+G YV ALV+MY LG L D+ K+FD MP RN V+WN ++
Sbjct: 140 FVSKGMELHGRVLKLGCGGDRYVQNALVSMYGKLGRLGDARKVFDGMPARNAVSWNALVA 199
Query: 149 G--------------------LVKW-----------GELEFARSLFEEMPCRNVVSWTGI 177
V W G++E A +F EMP R+ VSW +
Sbjct: 200 AHGATGDLHGVELLSREMPERSVSWWNAEITRHARVGDMEAAARVFREMPGRDAVSWNSL 259
Query: 178 IDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRG 237
I GYT++ R +AL +FR+M EP+E+T+++VL A + G+++ + +HGY +G
Sbjct: 260 IGGYTKLGRYVQALEVFREMQD-SGVEPTELTLVSVLGACAEIGELELGKGVHGYIGSKG 318
Query: 238 FTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVE 297
A D V N L+D YAKCG + A +LFE +S +++ W ++I GF++HG ++A+E
Sbjct: 319 VVA-DGYVGNALVDMYAKCGSLELARQLFESMST--RDITCWNAMIVGFSVHGYSRKALE 375
Query: 298 NFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDML 357
F M+ ++P+ VTFL VL ACSHGGLV+EG +F M E+ +++P +KHYGC++DML
Sbjct: 376 LFDAMR---VEPDHVTFLGVLIACSHGGLVDEGRVYFRSMTEDYKIVPGVKHYGCMVDML 432
Query: 358 GRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDY 417
R G++ +A + +P + + V+W+ +L AC HG++++ + ++ ++ GD
Sbjct: 433 CRCGKVAEAYQMINHMPVK-ANCVLWKMVLAACRVHGHIDLANKAFHELHQLMPIDDGDV 491
Query: 418 VLMYNILAGVGRFGDAERLRRVMDERNAFK 447
+ + N+ A R+ E LR + E +K
Sbjct: 492 ITVSNVYAEAKRWDVVEHLRTKVIEPGVWK 521
>gi|359491499|ref|XP_003634283.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
Length = 766
Score = 248 bits (633), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 144/381 (37%), Positives = 206/381 (54%), Gaps = 44/381 (11%)
Query: 109 VYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPC 168
V+ TA+V+ YV G L ++ ++FD MPE+N V+WN +I G V+ ++ AR LFE MPC
Sbjct: 266 VFTWTAMVSGYVQNGMLDEARRVFDGMPEKNSVSWNAIIAGYVQCKRMDQARELFEAMPC 325
Query: 169 RNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNG------- 221
+NV SW +I GY + +A F +M + I+ A++ Q+G
Sbjct: 326 QNVSSWNTMITGYAQNGDIAQARNFFDRM-----PQRDSISWAAIIAGYAQSGYGEEALH 380
Query: 222 -------------------------DVKSCQL---IHGYGEKRGFTAFDIRVLNCLIDTY 253
++ + +L +HG K G + V N L+ Y
Sbjct: 381 LFVEMKRDGERLNRSTFTSTLSTCAEIAALELGKQVHGRVVKAGLES-GCYVGNALLVMY 439
Query: 254 AKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVT 313
KCG I A +FE I E K +VSW ++I+G+A HG GKEA+ F M+K G+ P+ VT
Sbjct: 440 CKCGNIDDAYIVFEGI--EEKEVVSWNTMIAGYARHGFGKEALMLFESMKKTGILPDDVT 497
Query: 314 FLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGI 373
+ VL+ACSH GLV++G +F M ++ + + KHY C+ID+LGRAGRL+ A+ +
Sbjct: 498 MVGVLSACSHTGLVDKGTEYFYSMTQDYGITANSKHYTCMIDLLGRAGRLDDAQNLMKNM 557
Query: 374 PSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDA 433
P E D W LLGA HGN E+GE+ + I EME G YVL+ N+ A GR+GD
Sbjct: 558 PFE-PDAATWGALLGASRIHGNTELGEKAAKMIFEMEPDNSGMYVLLSNLYAASGRWGDV 616
Query: 434 ERLRRVMDERNAFKVPGCSLV 454
R+R M +R KVPG S V
Sbjct: 617 GRMRLRMRDRGVKKVPGYSWV 637
Score = 127 bits (320), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 106/364 (29%), Positives = 166/364 (45%), Gaps = 62/364 (17%)
Query: 119 YVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGII 178
YV L D+ +FD MPER+ V+WN MI+G + GEL A+ LFEE P R+V +WT ++
Sbjct: 214 YVKRNRLVDARGIFDRMPERDEVSWNTMISGYAQNGELLEAQRLFEESPVRDVFTWTAMV 273
Query: 179 DGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGF 238
GY + +EA +F M E + ++ A++ G V+ ++
Sbjct: 274 SGYVQNGMLDEARRVFDGM-----PEKNSVSWNAIIA-----GYVQCKRMDQARELFEAM 323
Query: 239 TAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVEN 298
++ N +I YA+ G I A F+ + +++ +SW +II+G+A G G+EA+
Sbjct: 324 PCQNVSSWNTMITGYAQNGDIAQARNFFD--RMPQRDSISWAAIIAGYAQSGYGEEALHL 381
Query: 299 FGRMQKVGLKPNRVTFLSVLNACS-----------HGGLVEEGL-------NFFDKMVEE 340
F M++ G + NR TF S L+ C+ HG +V+ GL N M +
Sbjct: 382 FVEMKRDGERLNRSTFTSTLSTCAEIAALELGKQVHGRVVKAGLESGCYVGNALLVMYCK 441
Query: 341 CEVLPD------------IKHYGCLIDMLGRAG-------RLEQAEKTALGIPSEITDVV 381
C + D + + +I R G E +KT + +P ++T V
Sbjct: 442 CGNIDDAYIVFEGIEEKEVVSWNTMIAGYARHGFGKEALMLFESMKKTGI-LPDDVTMVG 500
Query: 382 VWRTLLGACSFHGNVEMGERVTRKILEMERGYG-----GDYVLMYNILAGVGRFGDAERL 436
V L ACS G V+ G T M + YG Y M ++L GR DA+ L
Sbjct: 501 V----LSACSHTGLVDKG---TEYFYSMTQDYGITANSKHYTCMIDLLGRAGRLDDAQNL 553
Query: 437 RRVM 440
+ M
Sbjct: 554 MKNM 557
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 85/342 (24%), Positives = 157/342 (45%), Gaps = 30/342 (8%)
Query: 70 PLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSS 129
P S +++ +I C + L QL K+ + V N +++ V L+ +
Sbjct: 76 PRRSSISWNAMISGCLSNDKFYLARQL---FEKMPTRDLVSWNV-MISGCVRYRNLRAAR 131
Query: 130 KLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNE 189
LFD+MPER++V+WN M++G + G ++ A+ +F+EMPC+N +SW G++ Y + R +
Sbjct: 132 LLFDQMPERDVVSWNAMLSGYAQNGYVKEAKEIFDEMPCKNSISWNGMLAAYVQNGRIED 191
Query: 190 ALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCL 249
A LF E + + G VK +L+ G D N +
Sbjct: 192 ARRLFESKADWELISWNCM----------MGGYVKRNRLVDARGIFDRMPERDEVSWNTM 241
Query: 250 IDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKP 309
I YA+ G + A +LFE+ V +++ +WT+++SG+ +GM EA F M +
Sbjct: 242 ISGYAQNGELLEAQRLFEESPV--RDVFTWTAMVSGYVQNGMLDEARRVFDGMP----EK 295
Query: 310 NRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKT 369
N V++ +++ +++ F+ M C+ ++ + +I + G + QA
Sbjct: 296 NSVSWNAIIAGYVQCKRMDQARELFEAM--PCQ---NVSSWNTMITGYAQNGDIAQARNF 350
Query: 370 ALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMER 411
+P D + W ++ + G GE +EM+R
Sbjct: 351 FDRMPQR--DSISWAAIIAGYAQSG---YGEEALHLFVEMKR 387
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/309 (26%), Positives = 151/309 (48%), Gaps = 33/309 (10%)
Query: 128 SSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRS 187
+ +LF++MP R+LV+WNVMI+G V++ L AR LF++MP R+VVSW ++ GY +
Sbjct: 99 ARQLFEKMPTRDLVSWNVMISGCVRYRNLRAARLLFDQMPERDVVSWNAMLSGYAQNGYV 158
Query: 188 NEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLN 247
EA +F +M C+ + I+ +L A QNG ++ + + +++ N
Sbjct: 159 KEAKEIFDEM-PCK----NSISWNGMLAAYVQNGRIEDARRLF-----ESKADWELISWN 208
Query: 248 CLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGL 307
C++ Y K + A +F+ + ++ VSW ++ISG+A +G EA F
Sbjct: 209 CMMGGYVKRNRLVDARGIFD--RMPERDEVSWNTMISGYAQNGELLEAQRLFEE------ 260
Query: 308 KPNR--VTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQ 365
P R T+ ++++ G+++E FD M E+ V + +I + R++Q
Sbjct: 261 SPVRDVFTWTAMVSGYVQNGMLDEARRVFDGMPEKNSV-----SWNAIIAGYVQCKRMDQ 315
Query: 366 AEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILA 425
A + +P + +V W T++ + +G++ ++ + D + I+A
Sbjct: 316 ARELFEAMPCQ--NVSSWNTMITGYAQNGDIAQARNFFDRMPQR------DSISWAAIIA 367
Query: 426 GVGRFGDAE 434
G + G E
Sbjct: 368 GYAQSGYGE 376
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 106/232 (45%), Gaps = 38/232 (16%)
Query: 76 TYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEM 135
T++ + TCA ++ LG Q+H + K G +S YV AL+ MY G + D+ +F+ +
Sbjct: 396 TFTSTLSTCAEIAALELGKQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGI 455
Query: 136 PERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFR 195
E+ +V+WN MI G + G + A LFE M TGI+
Sbjct: 456 EEKEVVSWNTMIAGYARHGFGKEALMLFESMKK------TGIL----------------- 492
Query: 196 KMVACEYTEPSEITILAVLPAIWQNGDV-KSCQLIHGYGEKRGFTAFDIRVLNCLIDTYA 254
P ++T++ VL A G V K + + + G TA + + C+ID
Sbjct: 493 ---------PDDVTMVGVLSACSHTGLVDKGTEYFYSMTQDYGITA-NSKHYTCMIDLLG 542
Query: 255 KCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHG---MGKEAVENFGRMQ 303
+ G + A L +++ E + +W +++ +HG +G++A + M+
Sbjct: 543 RAGRLDDAQNLMKNMPFE-PDAATWGALLGASRIHGNTELGEKAAKMIFEME 593
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/271 (21%), Positives = 122/271 (45%), Gaps = 33/271 (12%)
Query: 137 ERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRK 196
+ ++V WN+ IT ++ G+ + A LF MP R+ +SW +I G ++ A LF K
Sbjct: 46 DADIVKWNIAITNHMRNGQCDSALRLFNSMPRRSSISWNAMISGCLSNDKFYLARQLFEK 105
Query: 197 MVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKC 256
M + ++ ++ + ++++ +L+ +R D+ N ++ YA+
Sbjct: 106 MPTRDL-----VSWNVMISGCVRYRNLRAARLLFDQMPER-----DVVSWNAMLSGYAQN 155
Query: 257 GCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLS 316
G + A ++F+++ KN +SW +++ + +G ++A F ++ +
Sbjct: 156 GYVKEAKEIFDEMPC--KNSISWNGMLAAYVQNGRIEDARRLF---------ESKADWEL 204
Query: 317 VLNACSHGGLVE-----EGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTAL 371
+ C GG V+ + FD+M E EV + +I + G L +A++ L
Sbjct: 205 ISWNCMMGGYVKRNRLVDARGIFDRMPERDEV-----SWNTMISGYAQNGELLEAQR--L 257
Query: 372 GIPSEITDVVVWRTLLGACSFHGNVEMGERV 402
S + DV W ++ +G ++ RV
Sbjct: 258 FEESPVRDVFTWTAMVSGYVQNGMLDEARRV 288
>gi|224141027|ref|XP_002323876.1| predicted protein [Populus trichocarpa]
gi|222866878|gb|EEF04009.1| predicted protein [Populus trichocarpa]
Length = 410
Score = 248 bits (633), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 146/393 (37%), Positives = 236/393 (60%), Gaps = 22/393 (5%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLS---H 89
+NTL+ Y+ + P + L Q++Q + + P D FT++FLI+ + + +
Sbjct: 30 FYNTLIRGYAKSSIPSYSLHLVNQMRQ------NGVDP--DEFTFNFLIKARSRVRVNIN 81
Query: 90 PNLG-----TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWN 144
NL ++H + K+GF SH++V AL+++Y + G + ++FDE ++V+W+
Sbjct: 82 RNLPLVVECDEIHGAVLKLGFSSHLFVRNALIHLYAARGNPVVAWRVFDETVGVDVVSWS 141
Query: 145 VMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTE 204
++ V+ GELE AR +F++MP R+VVSWT ++ Y++ S EAL L+ M+ +
Sbjct: 142 GLVLAHVRAGELERARWVFDQMPERDVVSWTTMVSAYSQAKYSREALELYVTMLD-KGVR 200
Query: 205 PSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASK 264
P E+T+++V+ A GD++ +H Y ++ GF + + + N LID YAKCGC+ A +
Sbjct: 201 PDEVTLVSVISACTNLGDLQMGYSVHSYIDENGFR-WMVSLCNALIDMYAKCGCMDRAWQ 259
Query: 265 LFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHG 324
+F +S RK+LV+W S+IS A + ++A F RM G+ P+ VTFL+VL A +H
Sbjct: 260 VFNSMS--RKSLVTWNSMISACANNRNPEDAFGLFSRMFNYGVAPDGVTFLAVLTAYAHV 317
Query: 325 GLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWR 384
GLV+EG F+ M + + I+HYGC+++MLG+AG LE+A + +P D VVW
Sbjct: 318 GLVDEGYRLFESMQRDHGIEARIEHYGCVVNMLGQAGWLEEAFELITSMPLPSND-VVWG 376
Query: 385 TLLGACSFHGNVEMGERVTRKILEMERGYGGDY 417
LL AC HG+V MGERV +K+LE++ GG Y
Sbjct: 377 VLLAACRKHGDVYMGERVVKKLLELKLD-GGYY 408
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 133/289 (46%), Gaps = 58/289 (20%)
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
G+L +A+ LF+++P N + +I GY + + + +L L +M +P E T +
Sbjct: 11 GDLAYAQRLFDQLPHPNTFFYNTLIRGYAKSSIPSYSLHLVNQMRQ-NGVDPDEFTFNFL 69
Query: 214 LPA-------IWQNGD-VKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKL 265
+ A I +N V C IHG K GF++ + V N LI YA G A ++
Sbjct: 70 IKARSRVRVNINRNLPLVVECDEIHGAVLKLGFSS-HLFVRNALIHLYAARGNPVVAWRV 128
Query: 266 FEDI-------------------SVER----------KNLVSWTSIISGFAMHGMGKEAV 296
F++ +ER +++VSWT+++S ++ +EA+
Sbjct: 129 FDETVGVDVVSWSGLVLAHVRAGELERARWVFDQMPERDVVSWTTMVSAYSQAKYSREAL 188
Query: 297 ENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGL--------NFFDKMVEECEVLPDIK 348
E + M G++P+ VT +SV++AC++ G ++ G N F MV C
Sbjct: 189 ELYVTMLDKGVRPDEVTLVSVISACTNLGDLQMGYSVHSYIDENGFRWMVSLCN------ 242
Query: 349 HYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVE 397
LIDM + G +++A + + + +V W +++ AC+ + N E
Sbjct: 243 ---ALIDMYAKCGCMDRAWQVFNSMSRK--SLVTWNSMISACANNRNPE 286
>gi|115447355|ref|NP_001047457.1| Os02g0620800 [Oryza sativa Japonica Group]
gi|47847758|dbj|BAD21535.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|47847799|dbj|BAD21575.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113536988|dbj|BAF09371.1| Os02g0620800 [Oryza sativa Japonica Group]
Length = 530
Score = 248 bits (633), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 134/386 (34%), Positives = 219/386 (56%), Gaps = 7/386 (1%)
Query: 70 PLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSS 129
P + F Y ++R + L +H K GF H ++ T+L++ Y G + D+
Sbjct: 111 PAPNQFVYPLVLRAACAIG-VQLVRSIHCHACKDGFYGHDFIRTSLLDGYSRYGMMGDAR 169
Query: 130 KLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNE 189
KLFD + +RN+V+W +++G + G++ A LFE MP R+V +W II G T+ E
Sbjct: 170 KLFDGLTDRNVVSWTALVSGYARAGKVGDAIVLFERMPQRDVPAWNAIIAGCTQNGLFVE 229
Query: 190 ALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCL 249
A+ +FR+MV E P+ T+ +L A G +K ++IHGY R F V+N L
Sbjct: 230 AVGIFRRMVD-EGFRPNGTTVSCLLSACGHLGMLKIGKVIHGYAW-RSCVGFGSSVVNGL 287
Query: 250 IDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKP 309
ID Y KCG + A +F+ S + L +W S+I+ A+HG + A+ F M+ G++P
Sbjct: 288 IDMYGKCGNLMEAKWIFDAFS--DRGLTTWNSLINCLALHGCSESAIAVFNSMRNEGVQP 345
Query: 310 NRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKT 369
+ VTF+ +LNAC+HGG V+EGL +F+ M +E + P+I+HYGC++D+L RAGR + A
Sbjct: 346 DEVTFVGLLNACTHGGFVDEGLRYFELMCDEHGIEPEIEHYGCVVDLLCRAGRFQDAMNF 405
Query: 370 ALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGR 429
+ + D V+W +LL AC H ++E+ E R +L++ V++ N+ + G
Sbjct: 406 INDMKVQ-PDEVIWGSLLNACRIHRHLELAEHAIRNLLDLNPSNANYVVMLANLYSEGGF 464
Query: 430 FGDAERLRRVMDER-NAFKVPGCSLV 454
+ + ++R++M E K+PGCS +
Sbjct: 465 WEEVRKVRKLMKEDVTGKKLPGCSWI 490
>gi|297805312|ref|XP_002870540.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316376|gb|EFH46799.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 547
Score = 248 bits (633), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 143/444 (32%), Positives = 228/444 (51%), Gaps = 66/444 (14%)
Query: 73 DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMY------------- 119
D +T+ +++ C+ + +G+ +H ++ ++GF V + T+ V+ Y
Sbjct: 106 DEYTFPLVMKVCSNNAEFRVGSTVHGLVLRIGFDKDVVLGTSFVDFYGKCKDLCSARKVF 165
Query: 120 ------------------VSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARS 161
V G L+++ ++FD MPERNL TWN ++ GLVK G+L AR
Sbjct: 166 GEMPERNVVSWTALIVAYVKSGELEEAKRMFDLMPERNLGTWNALVDGLVKSGDLVNARK 225
Query: 162 LFEEMPCRNVVSWTGIIDGYTR-------------------------------MNRSNEA 190
LF+EMP R+++S+T +IDGY + + NEA
Sbjct: 226 LFDEMPKRDIISYTSMIDGYAKGGDMVSARDLFENARGVDVRAWSALILGYAQNGQPNEA 285
Query: 191 LALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLI 250
+F +M A + +P E ++ ++ A Q G + C+ + Y + V+ LI
Sbjct: 286 FKVFSEMCA-KNVKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQSMNKFSSHYVIPALI 344
Query: 251 DTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPN 310
D AKCG + A+KLFE++ +++LVS+ S++ G A+HG G EAV F +M G+ P+
Sbjct: 345 DMNAKCGHMDRAAKLFEEMP--QRDLVSYCSMMEGMAIHGCGSEAVRLFEKMVDEGIVPD 402
Query: 311 RVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTA 370
V F +L CS LVEEGL +F+ M +E +L HY C++++L R G+L++A +
Sbjct: 403 EVAFTVILKVCSQSRLVEEGLRYFELMRKEYSILASPDHYSCIVNLLSRTGKLKEAYELI 462
Query: 371 LGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRF 430
+P E W +LLG CS HGN E+ E V R++ E+E G YVL+ NI A + R+
Sbjct: 463 KSMPFE-AHASAWGSLLGGCSLHGNTEIAEVVARQLFELEPQSAGSYVLLSNIYAALDRW 521
Query: 431 GDAERLRRVMDERNAFKVPGCSLV 454
D LR M+E K+ G S +
Sbjct: 522 ADLAHLRDKMNENGIKKICGRSWI 545
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 77/328 (23%), Positives = 134/328 (40%), Gaps = 49/328 (14%)
Query: 162 LFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNG 221
+FE +P W +I GY+ E ++L +M+ + P E T V+ N
Sbjct: 62 VFERVPYPGTYLWNHLIKGYSNKFLFFETVSLLMRMMRTGFARPDEYTFPLVMKVCSNNA 121
Query: 222 DVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTS 281
+ + +HG + GF D+ + +D Y KC + SA K+F ++ +N+VSWT+
Sbjct: 122 EFRVGSTVHGLVLRIGFDK-DVVLGTSFVDFYGKCKDLCSARKVFGEMP--ERNVVSWTA 178
Query: 282 IISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEEC 341
+I + G +EA F M + L T+ ++++ G + FD+M +
Sbjct: 179 LIVAYVKSGELEEAKRMFDLMPERNLG----TWNALVDGLVKSGDLVNARKLFDEMPKR- 233
Query: 342 EVLPDIKHYGCLIDMLGRAGRLEQAEK-------------TAL-------GIPSEI---- 377
DI Y +ID + G + A +AL G P+E
Sbjct: 234 ----DIISYTSMIDGYAKGGDMVSARDLFENARGVDVRAWSALILGYAQNGQPNEAFKVF 289
Query: 378 ---------TDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVL--MYNILAG 426
D + L+ ACS G E+ E+V + + + YV+ + ++ A
Sbjct: 290 SEMCAKNVKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQSMNKFSSHYVIPALIDMNAK 349
Query: 427 VGRFGDAERLRRVMDERNAFKVPGCSLV 454
G A +L M +R+ V CS++
Sbjct: 350 CGHMDRAAKLFEEMPQRDL--VSYCSMM 375
>gi|23617093|dbj|BAC20776.1| selenium-binding protein-like protein [Oryza sativa Japonica Group]
Length = 681
Score = 248 bits (633), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 138/405 (34%), Positives = 228/405 (56%), Gaps = 22/405 (5%)
Query: 67 PLP-PLFDSF----TYSFLIRTCATLSHPN-----------LGTQLHAVISKVGFQSHVY 110
PLP LF F +SF + +H N LG+ +HA+ K G ++
Sbjct: 123 PLPLTLFSRFRRRNPHSFTFLLASISNHLNAAGPSASACSFLGSHVHALAVKAGAAGDLF 182
Query: 111 VNTALVNMYVSLGFLKDSSKLFDEMPE-RNLVTWNVMITGLVKWGELEFARSLFEEMPCR 169
V ALV+ Y G + ++FDE+P R+++TWN ++ G V+ G + AR +F+EMP R
Sbjct: 183 VRNALVHFYGVSGDVGAMRRVFDELPRVRDVLTWNEVLAGYVRAGMMTVAREVFDEMPVR 242
Query: 170 NVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLI 229
+ +SW+ ++ GY + AL +FR MV + P++ ++ L A + G ++ + +
Sbjct: 243 DEISWSTLVGGYVKEEELEVALGVFRNMVE-QGVRPNQAAVVTALSAAARLGLLEHGKFV 301
Query: 230 HGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMH 289
H ++ G + V L+D YAKCGC+ A ++F+ + R+++ +W ++I G A H
Sbjct: 302 HNVVQRSGMPVC-MNVGAALVDMYAKCGCVAVAREVFD--GMRRRDVFAWNAMICGLAAH 358
Query: 290 GMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKH 349
G+G++AVE F R GL P VTF+ VLN CS GLV EG +F +VE+ + P+++H
Sbjct: 359 GLGRDAVELFERFISEGLSPTNVTFVGVLNGCSRSGLVAEGRRYFKLIVEKYRIEPEMEH 418
Query: 350 YGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEM 409
YGC++D+LGRAG + +A + G+ D V+W T+L +C HG V++G V K++E+
Sbjct: 419 YGCMVDLLGRAGLVPEAIELIEGM-HIAPDPVLWGTILSSCKTHGLVDLGVSVGNKLIEL 477
Query: 410 ERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
+ + G YVL+ I A ++ + +R++M R K G SL+
Sbjct: 478 DPTHSGYYVLLSGIYAKANKWDEVREVRKLMSSRGTNKSAGWSLM 522
>gi|125557337|gb|EAZ02873.1| hypothetical protein OsI_25005 [Oryza sativa Indica Group]
Length = 651
Score = 248 bits (633), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 138/405 (34%), Positives = 228/405 (56%), Gaps = 22/405 (5%)
Query: 67 PLP-PLFDSF----TYSFLIRTCATLSHPN-----------LGTQLHAVISKVGFQSHVY 110
PLP LF F +SF + +H N LG+ +HA+ K G ++
Sbjct: 123 PLPLTLFSRFRRRNPHSFTFLLASISNHLNAAGPSASACSFLGSHVHALAVKAGAAGDLF 182
Query: 111 VNTALVNMYVSLGFLKDSSKLFDEMPE-RNLVTWNVMITGLVKWGELEFARSLFEEMPCR 169
V ALV+ Y G + ++FDE+P R+++TWN ++ G V+ G + AR +F+EMP R
Sbjct: 183 VRNALVHFYGVSGDVGAMRRVFDELPRVRDVLTWNEVLAGYVRAGMMTVAREVFDEMPVR 242
Query: 170 NVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLI 229
+ +SW+ ++ GY + AL +FR MV + P++ ++ L A + G ++ + +
Sbjct: 243 DEISWSTLVGGYVKEEELEVALGVFRNMVE-QGVRPNQAAVVTALSAAARLGLLEHGKFV 301
Query: 230 HGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMH 289
H ++ G + V L+D YAKCGC+ A ++F+ + R+++ +W ++I G A H
Sbjct: 302 HNVVQRSGMPVC-MNVGAALVDMYAKCGCVAVAREVFDGM--RRRDVFAWNAMICGLAAH 358
Query: 290 GMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKH 349
G+G++AVE F R GL P VTF+ VLN CS GLV EG +F +VE+ + P+++H
Sbjct: 359 GLGRDAVELFERFISEGLSPTNVTFVGVLNGCSRSGLVAEGRRYFKLIVEKYRIEPEMEH 418
Query: 350 YGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEM 409
YGC++D+LGRAG + +A + G+ D V+W T+L +C HG V++G V K++E+
Sbjct: 419 YGCMVDLLGRAGLVPEAIELIEGM-HIAPDPVLWGTILSSCKTHGLVDLGVSVGNKLIEL 477
Query: 410 ERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
+ + G YVL+ I A ++ + +R++M R K G SL+
Sbjct: 478 DPTHSGYYVLLSGIYAKANKWDEVREVRKLMSSRGTNKSAGWSLM 522
>gi|147771783|emb|CAN60259.1| hypothetical protein VITISV_007741 [Vitis vinifera]
Length = 602
Score = 248 bits (633), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 137/424 (32%), Positives = 237/424 (55%), Gaps = 17/424 (4%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNL 92
L+ ++ Y P+KA L++ ++++ L P D S ++ C L +
Sbjct: 159 LWTLIIRAYVCVTFPEKALELFRTMREV------GLTP--DMVAVSTVVSACGLLGDLGV 210
Query: 93 GTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVK 152
+H I K G + +V++ L++ Y G L + + F E P +N+V WN MI V+
Sbjct: 211 AKAMHCFIEKSGIEVDAFVSSTLISTYGECGSLDYAYRFFQETPMKNIVVWNTMIHQSVE 270
Query: 153 WGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYT--EPSEITI 210
LE + LF+ MP R+VVSW +I G+ R+ + EAL F +M E++ P+ +T+
Sbjct: 271 HNNLELGKQLFQSMPDRDVVSWNSMIGGFARIGQYQEALTWFHEM---EFSGVSPNALTL 327
Query: 211 LAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDIS 270
L+ L A +G + + IH Y +K D + + LID Y+KCG I A ++FE+ +
Sbjct: 328 LSTLSACASHGALDTGAWIHAYVDKNDMNR-DGSLDSSLIDMYSKCGDIDKAVQIFEEST 386
Query: 271 VERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEG 330
R++L +WTSI+ G AMHG G++A+ F +M++ ++P+ VT + VL+AC+H GL+++G
Sbjct: 387 --RRDLFTWTSIVCGLAMHGRGEKALHYFSKMKEAQVQPDDVTMVGVLSACAHAGLLDQG 444
Query: 331 LNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGAC 390
+F M + ++P ++HYG ++D+LGR G L++A +G+P E + ++W L AC
Sbjct: 445 WWYFQSMEKVFGLVPKVEHYGXMVDLLGRMGCLKEAYDLIMGMPMEANE-IIWGAFLSAC 503
Query: 391 SFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPG 450
H NVE+GE R++L + V++ N+ A ++ + LR+ + ++ K PG
Sbjct: 504 RVHNNVELGEVAARRLLGLXPRDPWARVMLSNMYAEEAKWDRSMGLRKEIKKKGLKKSPG 563
Query: 451 CSLV 454
CS +
Sbjct: 564 CSSI 567
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 99/385 (25%), Positives = 161/385 (41%), Gaps = 67/385 (17%)
Query: 76 TYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEM 135
T+ +L++ + G ++HA + + GF +V+ AL+ YV+ G + ++FDEM
Sbjct: 93 TFMYLLKALVSGQEVKEGEEVHASVVRTGFACSEFVSGALLGFYVACGLVGKGRQVFDEM 152
Query: 136 PERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFR 195
+ LV W + II Y + +AL LFR
Sbjct: 153 RQPGLVLWTL-------------------------------IIRAYVCVTFPEKALELFR 181
Query: 196 KMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAK 255
M T P + + V+ A GD+ + +H + EK G D V + LI TY +
Sbjct: 182 TMREVGLT-PDMVAVSTVVSACGLLGDLGVAKAMHCFIEKSGIEV-DAFVSSTLISTYGE 239
Query: 256 CGCIFSASKLFEDI--------------SVERKNL---------------VSWTSIISGF 286
CG + A + F++ SVE NL VSW S+I GF
Sbjct: 240 CGSLDYAYRFFQETPMKNIVVWNTMIHQSVEHNNLELGKQLFQSMPDRDVVSWNSMIGGF 299
Query: 287 AMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPD 346
A G +EA+ F M+ G+ PN +T LS L+AC+ G ++ G + V++ ++ D
Sbjct: 300 ARIGQYQEALTWFHEMEFSGVSPNALTLLSTLSACASHGALDTG-AWIHAYVDKNDMNRD 358
Query: 347 IKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKI 406
LIDM + G +++A + S D+ W +++ + HG E K+
Sbjct: 359 GSLDSSLIDMYSKCGDIDKA--VQIFEESTRRDLFTWTSIVCGLAMHGRGEKALHYFSKM 416
Query: 407 LEMERGYGGDYVLMYNILAGVGRFG 431
E + D V M +L+ G
Sbjct: 417 KEAQ--VQPDDVTMVGVLSACAHAG 439
>gi|449441075|ref|XP_004138309.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
Length = 562
Score = 248 bits (633), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 147/406 (36%), Positives = 220/406 (54%), Gaps = 43/406 (10%)
Query: 53 LYKQLQQIYT----HSHSPLPPLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSH 108
L K L +Y H S LP DS T+ +++ A L +G +H ++ ++GF
Sbjct: 67 LNKHLNSLYIFALMHKFSILP---DSSTFPAVLKATAQLCDTGVGKMIHGIVIQMGFICD 123
Query: 109 VYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPC 168
VY +TALV++Y + + D+S+LFDE MP
Sbjct: 124 VYTSTALVHLYCTCLSISDASQLFDE-------------------------------MPE 152
Query: 169 RNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQL 228
RN V+W +I GYT + +A+ FR M+A + +PSE T++ VL A G +
Sbjct: 153 RNAVTWNALITGYTHNRKFVKAIDAFRGMLA-DGAQPSERTVVVVLSACSHLGAFNQGKW 211
Query: 229 IHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAM 288
IH + ++ V LID YAKCG ++ K+FE+I KN+ +W +ISG+AM
Sbjct: 212 IHEFIYHNRLR-LNVFVGTALIDMYAKCGAVYEVEKVFEEI--REKNVYTWNVLISGYAM 268
Query: 289 HGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIK 348
+G G A++ F RM KP+ VTFL VL AC H GLV EG F M ++ + P I+
Sbjct: 269 NGQGDAALQAFSRMLMENFKPDEVTFLGVLCACCHQGLVTEGRWQFMSMKQQFGLQPRIE 328
Query: 349 HYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILE 408
HYGC++D+LGRAG LE+A + + E D ++WR LL AC HGN ++GE + ++++E
Sbjct: 329 HYGCMVDLLGRAGLLEEALELIQSMSIE-PDPIIWRALLCACRVHGNTKLGEYIIKRLIE 387
Query: 409 MERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
+E G +YVL+ NI + R+ + +LR +M+ R KVPGCS +
Sbjct: 388 LEPNNGENYVLLSNIYSRERRWAEVGKLRGMMNLRGIRKVPGCSSI 433
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 107/233 (45%), Gaps = 7/233 (3%)
Query: 175 TGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGE 234
+I Y +N+ +L +F M P T AVL A Q D ++IHG
Sbjct: 58 NSMIRTYLDLNKHLNSLYIFALMHKFSIL-PDSSTFPAVLKATAQLCDTGVGKMIHGIVI 116
Query: 235 KRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKE 294
+ GF D+ L+ Y C I AS+LF+++ +N V+W ++I+G+ + +
Sbjct: 117 QMGFIC-DVYTSTALVHLYCTCLSISDASQLFDEMP--ERNAVTWNALITGYTHNRKFVK 173
Query: 295 AVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLI 354
A++ F M G +P+ T + VL+ACSH G +G + + + + ++ LI
Sbjct: 174 AIDAFRGMLADGAQPSERTVVVVLSACSHLGAFNQG-KWIHEFIYHNRLRLNVFVGTALI 232
Query: 355 DMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKIL 407
DM + G + + EK I + +V W L+ + +G + + ++L
Sbjct: 233 DMYAKCGAVYEVEKVFEEIREK--NVYTWNVLISGYAMNGQGDAALQAFSRML 283
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/301 (23%), Positives = 126/301 (41%), Gaps = 58/301 (19%)
Query: 23 TTNSLLHHSQLFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSF------- 75
T S+ SQLF+ E P++ + + L YTH+ + + D+F
Sbjct: 136 TCLSISDASQLFD---------EMPERNAVTWNALITGYTHNRKFVKAI-DAFRGMLADG 185
Query: 76 ------TYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSS 129
T ++ C+ L N G +H I + +V+V TAL++MY G + +
Sbjct: 186 AQPSERTVVVVLSACSHLGAFNQGKWIHEFIYHNRLRLNVFVGTALIDMYAKCGAVYEVE 245
Query: 130 KLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNE 189
K+F+E+ E+N+ TWNV+I+ GY + +
Sbjct: 246 KVFEEIREKNVYTWNVLIS-------------------------------GYAMNGQGDA 274
Query: 190 ALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCL 249
AL F +M+ E +P E+T L VL A G V + +++ I C+
Sbjct: 275 ALQAFSRMLM-ENFKPDEVTFLGVLCACCHQGLVTEGRWQFMSMKQQFGLQPRIEHYGCM 333
Query: 250 IDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKP 309
+D + G + A +L + +S+E ++ W +++ +HG K R+ + L+P
Sbjct: 334 VDLLGRAGLLEEALELIQSMSIEPDPII-WRALLCACRVHGNTKLGEYIIKRL--IELEP 390
Query: 310 N 310
N
Sbjct: 391 N 391
>gi|125603908|gb|EAZ43233.1| hypothetical protein OsJ_27833 [Oryza sativa Japonica Group]
Length = 567
Score = 248 bits (633), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 137/374 (36%), Positives = 217/374 (58%), Gaps = 8/374 (2%)
Query: 70 PLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSS 129
P + ++S ++ A ++ ++ + +G +V ++V + G L +
Sbjct: 189 PRRNGVSWSTMVGGYAAAGELDVAREMFDRMPAIG--RNVVTWNSMVTGFARHGLLPLAR 246
Query: 130 KLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNE 189
K+FDEMP RNLV+WN M+ G +++ AR LF+ MP ++VVSWT +I GY + R +
Sbjct: 247 KMFDEMPVRNLVSWNAMLRGYSVNSDMDGARELFDVMPEKDVVSWTCMISGYAQAGRYQD 306
Query: 190 ALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNC- 248
L LFR M +P+E+T+++VL A ++ + +H + +K + L
Sbjct: 307 TLELFRAMQTESNVQPNEVTMVSVLSACANLTALEEGRWVHAFIDKHKMVLNNEYNLGAA 366
Query: 249 LIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLK 308
LID YAKCG A K+F S++RKN+ +W ++I+ AM+G +++V+ F +M++ G K
Sbjct: 367 LIDMYAKCGRTDIAVKIFN--SLDRKNVSAWNALITRLAMNGNARDSVDAFEQMKRTGEK 424
Query: 309 PNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEK 368
PN +TF+ VL ACSHGGLV+EG F M C V P++KHYGC++DMLGRAG LE+AE+
Sbjct: 425 PNDITFVGVLTACSHGGLVDEGRRCFQSMASTCGVQPEVKHYGCMVDMLGRAGLLEEAEE 484
Query: 369 TALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKI--LEMERGYGGDYVLMYNILAG 426
+P DV+V+ LLGAC H ++ ERV +I L + G +VL+ +I A
Sbjct: 485 LIRSMPMA-PDVMVFGALLGACRMHKRFDVAERVQSEIHSLNLNAQQSGCHVLISDIYAA 543
Query: 427 VGRFGDAERLRRVM 440
G++ D R+V+
Sbjct: 544 AGKWFDVLEARQVV 557
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 107/345 (31%), Positives = 172/345 (49%), Gaps = 48/345 (13%)
Query: 73 DSFTYSFLIRTCATL-SHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKL 131
D FT L+ + L + P G Q+HA + GF + V+V AL+ MY G L+D++ +
Sbjct: 93 DRFTLPPLLGSAGKLPAFPRTGAQVHAQAVRRGFLADVFVVNALLAMY---GALRDAASM 149
Query: 132 FDEMPE----RNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRS 187
+ ++V+WN +I G VK GE+E A+ +F+EMP RN VSW+ ++ GY
Sbjct: 150 REVFGSCAGVADVVSWNTVIGGYVKCGEMESAKRVFDEMPRRNGVSWSTMVGGYAAAGEL 209
Query: 188 NEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGE-------KRGFTA 240
+ A +F +M PAI +N V ++ G+ ++ F
Sbjct: 210 DVAREMFDRM-----------------PAIGRN-VVTWNSMVTGFARHGLLPLARKMFDE 251
Query: 241 FDIRVL---NCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVE 297
+R L N ++ Y+ + A +LF D+ E K++VSWT +ISG+A G ++ +E
Sbjct: 252 MPVRNLVSWNAMLRGYSVNSDMDGARELF-DVMPE-KDVVSWTCMISGYAQAGRYQDTLE 309
Query: 298 NFGRMQ-KVGLKPNRVTFLSVLNACSHGGLVEEGL---NFFDKMVEECEVLPDIKHYG-C 352
F MQ + ++PN VT +SVL+AC++ +EEG F DK VL + + G
Sbjct: 310 LFRAMQTESNVQPNEVTMVSVLSACANLTALEEGRWVHAFIDK---HKMVLNNEYNLGAA 366
Query: 353 LIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVE 397
LIDM + GR + A K + + +V W L+ + +GN
Sbjct: 367 LIDMYAKCGRTDIAVKIFNSL--DRKNVSAWNALITRLAMNGNAR 409
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/258 (18%), Positives = 102/258 (39%), Gaps = 42/258 (16%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+ ++ Y+ A Q L++ +Q + S + P + T ++ CA L+ G
Sbjct: 291 WTCMISGYAQAGRYQDTLELFRAMQ-----TESNVQP--NEVTMVSVLSACANLTALEEG 343
Query: 94 TQLHAVISK--VGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLV 151
+HA I K + + + AL++MY G + K+F+ + +N+ WN +IT L
Sbjct: 344 RWVHAFIDKHKMVLNNEYNLGAALIDMYAKCGRTDIAVKIFNSLDRKNVSAWNALITRLA 403
Query: 152 KWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITIL 211
G + +D + +M R+ E +P++IT +
Sbjct: 404 MNGNARDS------------------VDAFEQMKRTGE--------------KPNDITFV 431
Query: 212 AVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISV 271
VL A G V + +++ C++D + G + A +L + +
Sbjct: 432 GVLTACSHGGLVDEGRRCFQSMASTCGVQPEVKHYGCMVDMLGRAGLLEEAEELIRSMPM 491
Query: 272 ERKNLVSWTSIISGFAMH 289
+++ + +++ MH
Sbjct: 492 A-PDVMVFGALLGACRMH 508
>gi|115480595|ref|NP_001063891.1| Os09g0555400 [Oryza sativa Japonica Group]
gi|113632124|dbj|BAF25805.1| Os09g0555400 [Oryza sativa Japonica Group]
gi|125606583|gb|EAZ45619.1| hypothetical protein OsJ_30287 [Oryza sativa Japonica Group]
Length = 644
Score = 248 bits (633), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 142/421 (33%), Positives = 238/421 (56%), Gaps = 13/421 (3%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+N++++ Y+ A + ++A L++ +++ L D FT L+ C+ + G
Sbjct: 179 WNSMINGYAQAGNTREACSLFEGMRRQGL--------LADEFTLVSLLFACSAEGNLEFG 230
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
+H+ + G + + + ALV+MY G L + FD MP +N V+W M+ L K
Sbjct: 231 KLVHSHLLVRGCRIDLILANALVDMYGKCGDLLMAHTCFDMMPFKNAVSWTSMLCALAKR 290
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
++ AR FE++P ++++SW +I Y + R +EAL L+ +M P E T+ AV
Sbjct: 291 ASIDAARDWFEQIPEKSIISWNAMISCYVQGGRFHEALDLYNRMKLLGLA-PDEFTLAAV 349
Query: 214 LPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVER 273
L A Q GD+ S ++IH + F + + N L+D YA+CG + +A LF ++
Sbjct: 350 LSACGQLGDLASGKMIHDC-IRDNFHNPGVALFNSLLDMYARCGQVDTAISLFSEMP--S 406
Query: 274 KNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNF 333
KN++SW +II AMHG ++A+ F M P+ +TF+++L+AC+HGGL+E G +
Sbjct: 407 KNVISWNAIIGALAMHGRAQDALMFFRSMVFDAFPPDEITFVALLSACNHGGLLEAGQYY 466
Query: 334 FDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFH 393
F M V P ++HY C++D+LGR G+L +A +P DVVVW LLGAC H
Sbjct: 467 FQAMRHVYNVKPGVEHYACMVDLLGRGGQLAKAVDLIKDMPMR-PDVVVWGALLGACRIH 525
Query: 394 GNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSL 453
G++++G++V +++LE+E GG +VL+ N+L ++ D +RLR++M E K G S
Sbjct: 526 GHIQIGKQVIKQLLELEGMSGGLFVLISNMLYETHQWEDMKRLRKLMREWGMKKNMGVSS 585
Query: 454 V 454
+
Sbjct: 586 I 586
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 113/435 (25%), Positives = 189/435 (43%), Gaps = 97/435 (22%)
Query: 11 NNITTQI---HSHLLTTNSLLHHSQLFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSP 67
+++T+QI + L + + QLF+ + P +Y L + Y +SH P
Sbjct: 41 DDVTSQILASYCALPAGGGVWYARQLFDRI---------PDPDRFVYNSLIRAYCNSHCP 91
Query: 68 ---LPPLF---------DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTAL 115
LP L + FT FL++ CA + H V+ K+GF V+V AL
Sbjct: 92 QEALPLLRGMIRRGILPNEFTLPFLLKACARVQAWEHVMVTHGVVVKLGFVGQVFVGNAL 151
Query: 116 VNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWT 175
++ Y S G L DS + FD EM RNVVSW
Sbjct: 152 LHSYASAGSLGDSRRFFD-------------------------------EMVDRNVVSWN 180
Query: 176 GIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEK 235
+I+GY + + EA +LF M + E T++++L A G+++ +L+H +
Sbjct: 181 SMINGYAQAGNTREACSLFEGMRR-QGLLADEFTLVSLLFACSAEGNLEFGKLVHSHLLV 239
Query: 236 RGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDI-------------------------- 269
RG D+ + N L+D Y KCG + A F+ +
Sbjct: 240 RG-CRIDLILANALVDMYGKCGDLLMAHTCFDMMPFKNAVSWTSMLCALAKRASIDAARD 298
Query: 270 ---SVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGL 326
+ K+++SW ++IS + G EA++ + RM+ +GL P+ T +VL+AC G
Sbjct: 299 WFEQIPEKSIISWNAMISCYVQGGRFHEALDLYNRMKLLGLAPDEFTLAAVLSACGQLGD 358
Query: 327 VEEGLNFFDKMVEECEVL----PDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVV 382
+ G KM+ +C P + + L+DM R G+++ A +PS+ +V+
Sbjct: 359 LASG-----KMIHDCIRDNFHNPGVALFNSLLDMYARCGQVDTAISLFSEMPSK--NVIS 411
Query: 383 WRTLLGACSFHGNVE 397
W ++GA + HG +
Sbjct: 412 WNAIIGALAMHGRAQ 426
>gi|345505206|gb|AEN99827.1| chlororespiratory reduction 4, partial [Aethionema grandiflorum]
Length = 594
Score = 248 bits (633), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 158/519 (30%), Positives = 252/519 (48%), Gaps = 110/519 (21%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNL 92
L+N ++ YS P++A LL+ + + D F+ S +++ C+ L
Sbjct: 68 LWNAVIKSYSHGIDPRRALLLFCLMIENGV--------CVDKFSLSLVLKACSRLEFLKE 119
Query: 93 GTQLHAVISKVGFQSHVYVNTAL-------------------------------VNMYVS 121
G Q+H + K G S +++ L ++ YV
Sbjct: 120 GMQIHGFLRKTGIWSDLFLQNCLIGLYLKCGCLGFARQVFDRMPQRDSVSYNSMIDGYVK 179
Query: 122 LGFLKDSSKLFD----------------------------------EMPERNLVTWNVMI 147
G +K + KLFD EMPE++L++WN MI
Sbjct: 180 CGLMKSAHKLFDLMPREIKNLISWNSMISGYAQTADGLNTASKLFSEMPEKDLISWNSMI 239
Query: 148 TGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALF-----RKMVAC-- 200
G VK G +E A+ LF+ MP R+VV+W +IDGY ++ + A +LF R +VAC
Sbjct: 240 NGCVKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKSLFDQMHQRDVVACNS 299
Query: 201 ------------------------EYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKR 236
+ P E T++ VL AI Q G + +H Y ++
Sbjct: 300 MMAGYVQNKYHMEALEIFNDMEKDSHLSPDETTLVIVLSAIAQLGRLSKAMSMHVYIVEK 359
Query: 237 GFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAV 296
F ++ LID ++KCG I A +FE I E K++ W ++I G A+HG+G+ A
Sbjct: 360 RF-PLGGKLGVALIDMHSKCGSIQHAISVFEGI--ENKSIDHWNAMIGGLAIHGLGELAF 416
Query: 297 ENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDM 356
+ ++++ ++P+ +TF+ VLNACSH GLV+EGL F+ M + + P ++HYGCL+D+
Sbjct: 417 DMLMQIERCSIQPDXITFIGVLNACSHSGLVKEGLLCFELMRRKHXIEPRLQHYGCLVDV 476
Query: 357 LGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYG-G 415
L R+G +E A+ +P E D V+WR+ L ACS H E GE V + ++ ++ GY
Sbjct: 477 LSRSGSIELAKHLIEDMPMEPND-VIWRSFLSACSTHEEFETGELVAKHLI-LQAGYNPS 534
Query: 416 DYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
YVL+ N+ A +G + D R+R +M +R K+PGCS +
Sbjct: 535 SYVLLSNMYASLGMWKDVRRVRMMMKQRKLHKIPGCSWI 573
>gi|115470713|ref|NP_001058955.1| Os07g0163900 [Oryza sativa Japonica Group]
gi|113610491|dbj|BAF20869.1| Os07g0163900 [Oryza sativa Japonica Group]
Length = 664
Score = 248 bits (633), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 138/405 (34%), Positives = 228/405 (56%), Gaps = 22/405 (5%)
Query: 67 PLP-PLFDSF----TYSFLIRTCATLSHPN-----------LGTQLHAVISKVGFQSHVY 110
PLP LF F +SF + +H N LG+ +HA+ K G ++
Sbjct: 123 PLPLTLFSRFRRRNPHSFTFLLASISNHLNAAGPSASACSFLGSHVHALAVKAGAAGDLF 182
Query: 111 VNTALVNMYVSLGFLKDSSKLFDEMPE-RNLVTWNVMITGLVKWGELEFARSLFEEMPCR 169
V ALV+ Y G + ++FDE+P R+++TWN ++ G V+ G + AR +F+EMP R
Sbjct: 183 VRNALVHFYGVSGDVGAMRRVFDELPRVRDVLTWNEVLAGYVRAGMMTVAREVFDEMPVR 242
Query: 170 NVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLI 229
+ +SW+ ++ GY + AL +FR MV + P++ ++ L A + G ++ + +
Sbjct: 243 DEISWSTLVGGYVKEEELEVALGVFRNMVE-QGVRPNQAAVVTALSAAARLGLLEHGKFV 301
Query: 230 HGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMH 289
H ++ G + V L+D YAKCGC+ A ++F+ + R+++ +W ++I G A H
Sbjct: 302 HNVVQRSGMPVC-MNVGAALVDMYAKCGCVAVAREVFD--GMRRRDVFAWNAMICGLAAH 358
Query: 290 GMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKH 349
G+G++AVE F R GL P VTF+ VLN CS GLV EG +F +VE+ + P+++H
Sbjct: 359 GLGRDAVELFERFISEGLSPTNVTFVGVLNGCSRSGLVAEGRRYFKLIVEKYRIEPEMEH 418
Query: 350 YGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEM 409
YGC++D+LGRAG + +A + G+ D V+W T+L +C HG V++G V K++E+
Sbjct: 419 YGCMVDLLGRAGLVPEAIELIEGM-HIAPDPVLWGTILSSCKTHGLVDLGVSVGNKLIEL 477
Query: 410 ERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
+ + G YVL+ I A ++ + +R++M R K G SL+
Sbjct: 478 DPTHSGYYVLLSGIYAKANKWDEVREVRKLMSSRGTNKSAGWSLM 522
>gi|15225445|ref|NP_178983.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206168|sp|Q9SIT7.1|PP151_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g13600
gi|4558664|gb|AAD22682.1| hypothetical protein [Arabidopsis thaliana]
gi|330251150|gb|AEC06244.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 697
Score = 248 bits (633), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 141/388 (36%), Positives = 216/388 (55%), Gaps = 10/388 (2%)
Query: 73 DSFTYSFLIRTCATLSHPNLGTQLHA-VISKVGFQSHVYVNTALVNMYVSLGFLKDSSKL 131
D T + +I CA+LS +G ++H V+ ++ + ++ A V+MY +K++ +
Sbjct: 252 DEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFI 311
Query: 132 FDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEAL 191
FD MP RN++ MI+G + AR +F +M RNVVSW +I GYT+ + EAL
Sbjct: 312 FDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEAL 371
Query: 192 ALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFT-----AFDIRVL 246
+LF ++ E P+ + +L A ++ H + K GF DI V
Sbjct: 372 SLF-CLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVG 430
Query: 247 NCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVG 306
N LID Y KCGC+ +F + +ER + VSW ++I GFA +G G EA+E F M + G
Sbjct: 431 NSLIDMYVKCGCVEEGYLVFRKM-MER-DCVSWNAMIIGFAQNGYGNEALELFREMLESG 488
Query: 307 LKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQA 366
KP+ +T + VL+AC H G VEEG ++F M + V P HY C++D+LGRAG LE+A
Sbjct: 489 EKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEA 548
Query: 367 EKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAG 426
+ +P + D V+W +LL AC H N+ +G+ V K+LE+E G YVL+ N+ A
Sbjct: 549 KSMIEEMPMQ-PDSVIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAE 607
Query: 427 VGRFGDAERLRRVMDERNAFKVPGCSLV 454
+G++ D +R+ M + K PGCS +
Sbjct: 608 LGKWEDVMNVRKSMRKEGVTKQPGCSWI 635
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 95/344 (27%), Positives = 181/344 (52%), Gaps = 7/344 (2%)
Query: 66 SPLPPLFDSFTYSFLIRTCATLSHPNLGTQ-LHAVISKVGFQSHVYVNTALVNMYVSLGF 124
+ L DS ++ L+ +C + + +HA + K GF + +++ L++ Y G
Sbjct: 11 ADLSSFTDSSPFAKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGS 70
Query: 125 LKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRM 184
L+D ++FD+MP+RN+ TWN ++TGL K G L+ A SLF MP R+ +W ++ G+ +
Sbjct: 71 LEDGRQVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQH 130
Query: 185 NRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIR 244
+R EAL F M+ E +E + +VL A D+ +H K F + D+
Sbjct: 131 DRCEEALCYF-AMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLS-DVY 188
Query: 245 VLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQK 304
+ + L+D Y+KCG + A ++F+++ +N+VSW S+I+ F +G EA++ F M +
Sbjct: 189 IGSALVDMYSKCGNVNDAQRVFDEMG--DRNVVSWNSLITCFEQNGPAVEALDVFQMMLE 246
Query: 305 VGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLE 364
++P+ VT SV++AC+ ++ G ++V+ ++ DI +DM + R++
Sbjct: 247 SRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIK 306
Query: 365 QAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILE 408
+A +P I +V+ +++ + + + + K+ E
Sbjct: 307 EARFIFDSMP--IRNVIAETSMISGYAMAASTKAARLMFTKMAE 348
Score = 124 bits (311), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 101/407 (24%), Positives = 179/407 (43%), Gaps = 82/407 (20%)
Query: 71 LFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSK 130
+ + ++++ ++ C+ L+ N G Q+H++I+K F S VY+ +ALV+MY G + D+ +
Sbjct: 149 VLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQR 208
Query: 131 LFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEA 190
+FDEM +RN+V+WN +IT + G + EA
Sbjct: 209 VFDEMGDRNVVSWNSLITCFEQNGP-------------------------------AVEA 237
Query: 191 LALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLI 250
L +F+ M+ EP E+T+ +V+ A +K Q +HG K DI + N +
Sbjct: 238 LDVFQMMLESR-VEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFV 296
Query: 251 DTYAKCGCIFSASKLFEDISVE-----------------------------RKNLVSWTS 281
D YAKC I A +F+ + + +N+VSW +
Sbjct: 297 DMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNA 356
Query: 282 IISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNAC-----------SHGGLVEEG 330
+I+G+ +G +EA+ F +++ + P +F ++L AC +H +++ G
Sbjct: 357 LIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHG 416
Query: 331 LNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGAC 390
F + EE DI LIDM + G +E+ + D V W ++
Sbjct: 417 FKF--QSGEE----DDIFVGNSLIDMYVKCGCVEEGYLVFRKMMER--DCVSWNAMIIGF 468
Query: 391 SFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLR 437
+ +G + R++L E G D++ M +L+ G G E R
Sbjct: 469 AQNGYGNEALELFREML--ESGEKPDHITMIGVLSACGHAGFVEEGR 513
>gi|125540362|gb|EAY86757.1| hypothetical protein OsI_08137 [Oryza sativa Indica Group]
Length = 493
Score = 248 bits (633), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 141/425 (33%), Positives = 225/425 (52%), Gaps = 42/425 (9%)
Query: 64 SHSPLPPLFDSFTYSFLIRTCATL-SHPNLGTQLHAVISKVGFQSHVYVN---------- 112
+H LP D + SF + C+ L SHP + + +H++ ++G VYV
Sbjct: 64 NHRLLP---DHLSLSFSLHPCSRLPSHP-VASVVHSLAVRLGHARDVYVVNAAASAYFAA 119
Query: 113 -----------------------TALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITG 149
T +V + + G ++ + FD MPE+N+V+WN M+
Sbjct: 120 ADVASAERLFSEASRDVADVVTWTTMVTGHANAGDVERARWFFDAMPEKNVVSWNTMLGA 179
Query: 150 LVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEIT 209
+ G L AR LF+ MP RN +W +I G + + EAL +F MVAC P+E
Sbjct: 180 YARAGMLPKARKLFDRMPSRNAATWGSMITGLLQSDHCEEALRVFSDMVACGVV-PNEPA 238
Query: 210 ILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDI 269
+++ + A Q ++ +HGY E+ A + ++D Y KCG I A ++F +
Sbjct: 239 LVSTVSACTQLRWMEHGTWVHGYAERELNGAMSAVLATAIVDMYGKCGSIRDAVRVFAAM 298
Query: 270 SVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEE 329
V +N+ SW S+I+G AM+G ++A+ F +MQ G++PN +TF+ +L+ACSH GLV+E
Sbjct: 299 PV--RNIYSWNSMIAGLAMNGSERQALSLFWKMQLAGVRPNDITFIGLLSACSHSGLVDE 356
Query: 330 GLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGA 389
G F KMV + P +HYG ++D+LGR+G + +A +P E +W L GA
Sbjct: 357 GRWLFYKMVNHFGIQPVPEHYGLMVDLLGRSGHVREAVDFVKSMPVE-PHPGLWGALAGA 415
Query: 390 CSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVP 449
C HG VE+GE V +K++E+E +G Y+L+ NI A R+ D +RR++ +R K
Sbjct: 416 CKIHGEVELGEEVAKKLIELEPQHGSRYILLSNIYATSNRWDDMANVRRILKDRKVPKGT 475
Query: 450 GCSLV 454
G ++V
Sbjct: 476 GNAIV 480
>gi|125562063|gb|EAZ07511.1| hypothetical protein OsI_29767 [Oryza sativa Indica Group]
Length = 567
Score = 248 bits (632), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 137/374 (36%), Positives = 217/374 (58%), Gaps = 8/374 (2%)
Query: 70 PLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSS 129
P + ++S ++ A ++ ++ + +G +V ++V + G L +
Sbjct: 189 PRRNGVSWSTMVGGYAAAGELDVAREMFDRMPAIG--RNVVTWNSMVTGFARHGLLPLAR 246
Query: 130 KLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNE 189
K+FDEMP RNLV+WN M+ G +++ AR LF+ MP ++VVSWT +I GY + R +
Sbjct: 247 KMFDEMPVRNLVSWNAMLRGYSVNSDMDGARELFDVMPEKDVVSWTCMISGYAQAGRYQD 306
Query: 190 ALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNC- 248
L LFR M +P+E+T+++VL A ++ + +H + +K + L
Sbjct: 307 TLELFRAMQTESNVQPNEVTMVSVLSACANLTALEEGRWVHAFIDKHKMVLNNEYNLGAA 366
Query: 249 LIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLK 308
LID YAKCG A K+F S++RKN+ +W ++I+ AM+G +++V+ F +M++ G K
Sbjct: 367 LIDMYAKCGRTDIAVKIFN--SLDRKNVSAWNALITRLAMNGNAQDSVDAFEQMKRTGEK 424
Query: 309 PNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEK 368
PN +TF+ VL ACSHGGLV+EG F M C V P++KHYGC++DMLGRAG LE+AE+
Sbjct: 425 PNDITFVGVLTACSHGGLVDEGRRCFQSMASTCGVQPEVKHYGCMVDMLGRAGLLEEAEE 484
Query: 369 TALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKI--LEMERGYGGDYVLMYNILAG 426
+P DV+V+ LLGAC H ++ ERV +I L + G +VL+ +I A
Sbjct: 485 LIRSMPMA-PDVMVFGALLGACRMHKRFDVAERVQSEIHSLNLNAQQSGCHVLISDIYAA 543
Query: 427 VGRFGDAERLRRVM 440
G++ D R+V+
Sbjct: 544 AGKWFDVLEARQVV 557
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 116/385 (30%), Positives = 189/385 (49%), Gaps = 56/385 (14%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATL-SHPN 91
L N L+ + + SP+ +F + L + L P D FT L+ + L + P
Sbjct: 61 LHNILIRASASSASPRLSFAAFSSLLRC------GLVP--DRFTLPPLLGSAGKLPAFPR 112
Query: 92 LGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPE----RNLVTWNVMI 147
G Q+HA + GF + V+V AL+ MY G L+D++ + + ++V+WN +I
Sbjct: 113 TGAQVHAQAVRRGFLADVFVVNALLAMY---GALRDAASMREVFGSCAGVADVVSWNTVI 169
Query: 148 TGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSE 207
G VK GE+E A+ +F+EMP RN VSW+ ++ GY + A +F +M
Sbjct: 170 GGYVKCGEMESAKRVFDEMPRRNGVSWSTMVGGYAAAGELDVAREMFDRM---------- 219
Query: 208 ITILAVLPAIWQNGDVKSCQLIHGYGE-------KRGFTAFDIRVL---NCLIDTYAKCG 257
PAI +N V ++ G+ ++ F +R L N ++ Y+
Sbjct: 220 -------PAIGRN-VVTWNSMVTGFARHGLLPLARKMFDEMPVRNLVSWNAMLRGYSVNS 271
Query: 258 CIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQ-KVGLKPNRVTFLS 316
+ A +LF D+ E K++VSWT +ISG+A G ++ +E F MQ + ++PN VT +S
Sbjct: 272 DMDGARELF-DVMPE-KDVVSWTCMISGYAQAGRYQDTLELFRAMQTESNVQPNEVTMVS 329
Query: 317 VLNACSHGGLVEEGL---NFFDKMVEECEVLPDIKHYG-CLIDMLGRAGRLEQAEKTALG 372
VL+AC++ +EEG F DK VL + + G LIDM + GR + A K
Sbjct: 330 VLSACANLTALEEGRWVHAFIDK---HKMVLNNEYNLGAALIDMYAKCGRTDIAVKIFNS 386
Query: 373 IPSEITDVVVWRTLLGACSFHGNVE 397
+ + +V W L+ + +GN +
Sbjct: 387 L--DRKNVSAWNALITRLAMNGNAQ 409
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/258 (18%), Positives = 103/258 (39%), Gaps = 42/258 (16%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+ ++ Y+ A Q L++ +Q + S + P + T ++ CA L+ G
Sbjct: 291 WTCMISGYAQAGRYQDTLELFRAMQ-----TESNVQP--NEVTMVSVLSACANLTALEEG 343
Query: 94 TQLHAVISK--VGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLV 151
+HA I K + + + AL++MY G + K+F+ + +N+ WN +IT L
Sbjct: 344 RWVHAFIDKHKMVLNNEYNLGAALIDMYAKCGRTDIAVKIFNSLDRKNVSAWNALITRLA 403
Query: 152 KWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITIL 211
G + + +D + +M R+ E +P++IT +
Sbjct: 404 MNGNAQDS------------------VDAFEQMKRTGE--------------KPNDITFV 431
Query: 212 AVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISV 271
VL A G V + +++ C++D + G + A +L + +
Sbjct: 432 GVLTACSHGGLVDEGRRCFQSMASTCGVQPEVKHYGCMVDMLGRAGLLEEAEELIRSMPM 491
Query: 272 ERKNLVSWTSIISGFAMH 289
+++ + +++ MH
Sbjct: 492 A-PDVMVFGALLGACRMH 508
>gi|297734304|emb|CBI15551.3| unnamed protein product [Vitis vinifera]
Length = 685
Score = 248 bits (632), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 144/381 (37%), Positives = 206/381 (54%), Gaps = 44/381 (11%)
Query: 109 VYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPC 168
V+ TA+V+ YV G L ++ ++FD MPE+N V+WN +I G V+ ++ AR LFE MPC
Sbjct: 185 VFTWTAMVSGYVQNGMLDEARRVFDGMPEKNSVSWNAIIAGYVQCKRMDQARELFEAMPC 244
Query: 169 RNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNG------- 221
+NV SW +I GY + +A F +M + I+ A++ Q+G
Sbjct: 245 QNVSSWNTMITGYAQNGDIAQARNFFDRM-----PQRDSISWAAIIAGYAQSGYGEEALH 299
Query: 222 -------------------------DVKSCQL---IHGYGEKRGFTAFDIRVLNCLIDTY 253
++ + +L +HG K G + V N L+ Y
Sbjct: 300 LFVEMKRDGERLNRSTFTSTLSTCAEIAALELGKQVHGRVVKAGLES-GCYVGNALLVMY 358
Query: 254 AKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVT 313
KCG I A +FE I E K +VSW ++I+G+A HG GKEA+ F M+K G+ P+ VT
Sbjct: 359 CKCGNIDDAYIVFEGI--EEKEVVSWNTMIAGYARHGFGKEALMLFESMKKTGILPDDVT 416
Query: 314 FLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGI 373
+ VL+ACSH GLV++G +F M ++ + + KHY C+ID+LGRAGRL+ A+ +
Sbjct: 417 MVGVLSACSHTGLVDKGTEYFYSMTQDYGITANSKHYTCMIDLLGRAGRLDDAQNLMKNM 476
Query: 374 PSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDA 433
P E D W LLGA HGN E+GE+ + I EME G YVL+ N+ A GR+GD
Sbjct: 477 PFE-PDAATWGALLGASRIHGNTELGEKAAKMIFEMEPDNSGMYVLLSNLYAASGRWGDV 535
Query: 434 ERLRRVMDERNAFKVPGCSLV 454
R+R M +R KVPG S V
Sbjct: 536 GRMRLRMRDRGVKKVPGYSWV 556
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 106/364 (29%), Positives = 166/364 (45%), Gaps = 62/364 (17%)
Query: 119 YVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGII 178
YV L D+ +FD MPER+ V+WN MI+G + GEL A+ LFEE P R+V +WT ++
Sbjct: 133 YVKRNRLVDARGIFDRMPERDEVSWNTMISGYAQNGELLEAQRLFEESPVRDVFTWTAMV 192
Query: 179 DGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGF 238
GY + +EA +F M E + ++ A++ G V+ ++
Sbjct: 193 SGYVQNGMLDEARRVFDGM-----PEKNSVSWNAIIA-----GYVQCKRMDQARELFEAM 242
Query: 239 TAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVEN 298
++ N +I YA+ G I A F+ + +++ +SW +II+G+A G G+EA+
Sbjct: 243 PCQNVSSWNTMITGYAQNGDIAQARNFFDRMP--QRDSISWAAIIAGYAQSGYGEEALHL 300
Query: 299 FGRMQKVGLKPNRVTFLSVLNACS-----------HGGLVEEGL-------NFFDKMVEE 340
F M++ G + NR TF S L+ C+ HG +V+ GL N M +
Sbjct: 301 FVEMKRDGERLNRSTFTSTLSTCAEIAALELGKQVHGRVVKAGLESGCYVGNALLVMYCK 360
Query: 341 CEVLPD------------IKHYGCLIDMLGRAG-------RLEQAEKTALGIPSEITDVV 381
C + D + + +I R G E +KT + +P ++T V
Sbjct: 361 CGNIDDAYIVFEGIEEKEVVSWNTMIAGYARHGFGKEALMLFESMKKTGI-LPDDVTMVG 419
Query: 382 VWRTLLGACSFHGNVEMGERVTRKILEMERGYG-----GDYVLMYNILAGVGRFGDAERL 436
V L ACS G V+ G T M + YG Y M ++L GR DA+ L
Sbjct: 420 V----LSACSHTGLVDKG---TEYFYSMTQDYGITANSKHYTCMIDLLGRAGRLDDAQNL 472
Query: 437 RRVM 440
+ M
Sbjct: 473 MKNM 476
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 136/287 (47%), Gaps = 26/287 (9%)
Query: 125 LKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRM 184
L+ + LFD+MPER++V+WN M++G + G ++ A+ +F+EMPC+N +SW G++ Y +
Sbjct: 46 LRAARLLFDQMPERDVVSWNAMLSGYAQNGYVKEAKEIFDEMPCKNSISWNGMLAAYVQN 105
Query: 185 NRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIR 244
R +A LF E + + G VK +L+ G D
Sbjct: 106 GRIEDARRLFESKADWELISWNCMM----------GGYVKRNRLVDARGIFDRMPERDEV 155
Query: 245 VLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQK 304
N +I YA+ G + A +LFE+ V +++ +WT+++SG+ +GM EA F M
Sbjct: 156 SWNTMISGYAQNGELLEAQRLFEESPV--RDVFTWTAMVSGYVQNGMLDEARRVFDGMP- 212
Query: 305 VGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLE 364
+ N V++ +++ +++ F+ M C+ ++ + +I + G +
Sbjct: 213 ---EKNSVSWNAIIAGYVQCKRMDQARELFEAM--PCQ---NVSSWNTMITGYAQNGDIA 264
Query: 365 QAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMER 411
QA +P D + W ++ + G GE +EM+R
Sbjct: 265 QARNFFDRMPQR--DSISWAAIIAGYAQSG---YGEEALHLFVEMKR 306
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 106/232 (45%), Gaps = 38/232 (16%)
Query: 76 TYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEM 135
T++ + TCA ++ LG Q+H + K G +S YV AL+ MY G + D+ +F+ +
Sbjct: 315 TFTSTLSTCAEIAALELGKQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGI 374
Query: 136 PERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFR 195
E+ +V+WN MI G + G + A LFE M TGI+
Sbjct: 375 EEKEVVSWNTMIAGYARHGFGKEALMLFESMKK------TGIL----------------- 411
Query: 196 KMVACEYTEPSEITILAVLPAIWQNGDV-KSCQLIHGYGEKRGFTAFDIRVLNCLIDTYA 254
P ++T++ VL A G V K + + + G TA + + C+ID
Sbjct: 412 ---------PDDVTMVGVLSACSHTGLVDKGTEYFYSMTQDYGITA-NSKHYTCMIDLLG 461
Query: 255 KCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHG---MGKEAVENFGRMQ 303
+ G + A L +++ E + +W +++ +HG +G++A + M+
Sbjct: 462 RAGRLDDAQNLMKNMPFE-PDAATWGALLGASRIHGNTELGEKAAKMIFEME 512
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 121/252 (48%), Gaps = 27/252 (10%)
Query: 147 ITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPS 206
+ G V++ L AR LF++MP R+VVSW ++ GY + EA +F +M C+ +
Sbjct: 37 LRGCVRYRNLRAARLLFDQMPERDVVSWNAMLSGYAQNGYVKEAKEIFDEM-PCK----N 91
Query: 207 EITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLF 266
I+ +L A QNG ++ + + +++ NC++ Y K + A +F
Sbjct: 92 SISWNGMLAAYVQNGRIEDARRLF-----ESKADWELISWNCMMGGYVKRNRLVDARGIF 146
Query: 267 EDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNR--VTFLSVLNACSHG 324
+ + ++ VSW ++ISG+A +G EA F P R T+ ++++
Sbjct: 147 DRMP--ERDEVSWNTMISGYAQNGELLEAQRLFEE------SPVRDVFTWTAMVSGYVQN 198
Query: 325 GLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWR 384
G+++E FD M E+ V + +I + R++QA + +P + +V W
Sbjct: 199 GMLDEARRVFDGMPEKNSV-----SWNAIIAGYVQCKRMDQARELFEAMPCQ--NVSSWN 251
Query: 385 TLLGACSFHGNV 396
T++ + +G++
Sbjct: 252 TMITGYAQNGDI 263
>gi|328774749|gb|AEB39774.1| pentatricopeptide repeat protein 65 [Funaria hygrometrica]
Length = 771
Score = 248 bits (632), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 139/388 (35%), Positives = 215/388 (55%), Gaps = 48/388 (12%)
Query: 73 DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLF 132
+ TY+ +++ C T G ++H I + G+ ++V AL+ MY G LK+
Sbjct: 297 NKITYTSILQGCTTPLALEHGKKVHRYIIQSGYGREIWVVNALITMYCKCGGLKE----- 351
Query: 133 DEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALA 192
AR LF ++P R+VV+WT ++ GY ++ +EA+
Sbjct: 352 --------------------------ARKLFGDLPHRDVVTWTAMVTGYAQLGFHDEAID 385
Query: 193 LFRKMVACEYTEPSEITILAVL-----PAIWQNGDVKSCQLIH-GYGEKRGFTAFDIRVL 246
LFR+M + +P ++T + L PA Q G QL+H GY + D+ +
Sbjct: 386 LFRRMQQ-QGIKPDKMTFTSALTSCSSPAFLQEGKSIHQQLVHAGY-------SLDVYLQ 437
Query: 247 NCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVG 306
+ L+ YAKCG + A +F +S +N+V+WT++I+G A HG +EA+E F +M+K G
Sbjct: 438 SALVSMYAKCGSMDDARLVFNQMS--ERNVVAWTAMITGCAQHGRCREALEYFEQMKKQG 495
Query: 307 LKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQA 366
+KP++VTF SVL+AC+H GLVEEG F M + + P ++HY C +D+LGRAG LE+A
Sbjct: 496 IKPDKVTFTSVLSACTHVGLVEEGRKHFRSMYLDYGIKPMVEHYSCFVDLLGRAGHLEEA 555
Query: 367 EKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAG 426
E L +P + VW LL AC H +VE GER +L+++ G YV + NI A
Sbjct: 556 ENVILTMPFQ-PGPSVWGALLSACRIHSDVERGERAAENVLKLDPDDDGAYVALSNIYAA 614
Query: 427 VGRFGDAERLRRVMDERNAFKVPGCSLV 454
GR+ DAE++R+VM++R+ K PG S +
Sbjct: 615 AGRYEDAEKVRQVMEKRDVVKEPGQSWI 642
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 100/371 (26%), Positives = 175/371 (47%), Gaps = 50/371 (13%)
Query: 73 DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLF 132
D T+ L+ +G ++H I+K G + V T+LV MY G + + +F
Sbjct: 196 DKVTFVSLLNAFTNPELLQVGQKVHMEIAKAGLELEPRVGTSLVGMYAKCGDISKAQVIF 255
Query: 133 DEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALA 192
D++PE+N+VTW ++I G + G+++ A L E+M V
Sbjct: 256 DKLPEKNVVTWTLLIAGYAQQGQVDVALELLEKMQQAEVA-------------------- 295
Query: 193 LFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDT 252
P++IT ++L ++ + +H Y + G+ +I V+N LI
Sbjct: 296 ------------PNKITYTSILQGCTTPLALEHGKKVHRYIIQSGY-GREIWVVNALITM 342
Query: 253 YAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRV 312
Y KCG + A KLF D+ +++V+WT++++G+A G EA++ F RMQ+ G+KP+++
Sbjct: 343 YCKCGGLKEARKLFGDLP--HRDVVTWTAMVTGYAQLGFHDEAIDLFRRMQQQGIKPDKM 400
Query: 313 TFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALG 372
TF S L +CS ++EG + ++V L D+ L+ M + G ++ A +
Sbjct: 401 TFTSALTSCSSPAFLQEGKSIHQQLVHAGYSL-DVYLQSALVSMYAKCGSMDDA-RLVFN 458
Query: 373 IPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILE-----MERGYGGDYVLMYNILAGV 427
SE +VV W ++ C+ HG R+ LE ++G D V ++L+
Sbjct: 459 QMSE-RNVVAWTAMITGCAQHGRC-------REALEYFEQMKKQGIKPDKVTFTSVLSAC 510
Query: 428 GRFGDAERLRR 438
G E R+
Sbjct: 511 THVGLVEEGRK 521
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/314 (27%), Positives = 144/314 (45%), Gaps = 38/314 (12%)
Query: 74 SFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFD 133
S + L++ CA L G ++HA I K G Q + Y+ L++MY G L D+ ++FD
Sbjct: 96 SDVFRGLLQECARLRSLEQGREVHAAILKSGIQPNRYLENTLLSMYAKCGSLTDARRVFD 155
Query: 134 EMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALAL 193
+ +RN+V+W MI V + A +E M
Sbjct: 156 GIRDRNIVSWTAMIEAFVAGNQNLEAYKCYETM--------------------------- 188
Query: 194 FRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTY 253
K+ C +P ++T +++L A ++ Q +H K G + RV L+ Y
Sbjct: 189 --KLAGC---KPDKVTFVSLLNAFTNPELLQVGQKVHMEIAKAGLE-LEPRVGTSLVGMY 242
Query: 254 AKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVT 313
AKCG I A +F+ + KN+V+WT +I+G+A G A+E +MQ+ + PN++T
Sbjct: 243 AKCGDISKAQVIFDKLP--EKNVVTWTLLIAGYAQQGQVDVALELLEKMQQAEVAPNKIT 300
Query: 314 FLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGI 373
+ S+L C+ +E G +++ +I LI M + G L++A K +
Sbjct: 301 YTSILQGCTTPLALEHGKKVHRYIIQS-GYGREIWVVNALITMYCKCGGLKEARKLFGDL 359
Query: 374 PSEITDVVVWRTLL 387
P DVV W ++
Sbjct: 360 PHR--DVVTWTAMV 371
>gi|413946157|gb|AFW78806.1| hypothetical protein ZEAMMB73_634908 [Zea mays]
Length = 1145
Score = 248 bits (632), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 136/374 (36%), Positives = 214/374 (57%), Gaps = 14/374 (3%)
Query: 83 TCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVT 142
C+ + G Q+H++ K G Q + YV AL+ +Y + ++FD M ++ V+
Sbjct: 427 ACSNIEALETGKQVHSLAVKAGCQFNSYVCNALITLYGKYRSIGSVRQIFDRMTVKDTVS 486
Query: 143 WNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMV-ACE 201
+N ++ LV+ + AR +F MP +VVSWT II + ++ NEA+ +FR M+ E
Sbjct: 487 YNSFMSALVQNNLFDEARDVFNNMPSPDVVSWTTIISACAQADQGNEAVEIFRSMLHERE 546
Query: 202 YTEPSEITILAVLPAIWQNGDVKSCQL---IHGYGEKRGFTAFDIRVLNCLIDTYAKCGC 258
P +TIL L +G++ + QL IH K G + + V N L+ Y KC
Sbjct: 547 LPNPPILTILLGL-----SGNLGAPQLGQQIHTIAIKLGMDS-GLVVANALVSMYFKCSS 600
Query: 259 IFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVL 318
S K+F+ S+E +++ +W +II+G+A HG+G+EA+ + M G+ PN VTF+ +L
Sbjct: 601 ADSL-KVFD--SMEERDIFTWNTIITGYAQHGLGREAIRMYQLMVSAGVLPNEVTFVGLL 657
Query: 319 NACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEIT 378
+ACSH GLV+EG FF M + + P ++HY C++D+LGRAG ++ AE +P E
Sbjct: 658 HACSHSGLVDEGHQFFKSMSSDYGLTPLLEHYACMVDLLGRAGDVQGAEHFIYDMPIE-P 716
Query: 379 DVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRR 438
D V+W LLGAC H NVE+G R K+ +E G+YV++ NI + G + + ++R+
Sbjct: 717 DSVIWSALLGACKIHKNVEIGRRAAEKLFSIEPSNAGNYVMLSNIYSSQGMWDEVAKVRK 776
Query: 439 VMDERNAFKVPGCS 452
+M ER K PGCS
Sbjct: 777 LMKERGVNKDPGCS 790
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 89/302 (29%), Positives = 151/302 (50%), Gaps = 21/302 (6%)
Query: 99 VISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEF 158
V +G ++ V N A+V YV G + + KLFD MP R++ +WN M+TG +E
Sbjct: 117 VFDGMGVRNTVAWN-AMVTCYVQNGDITLARKLFDAMPSRDVSSWNTMLTGYCHSQLMEE 175
Query: 159 ARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIW 218
AR+LFE MP RN VSWT +I GY + + A +FR M+ CE P + +++VL A+
Sbjct: 176 ARNLFERMPERNGVSWTVMISGYVLIEQHGRAWDMFRTML-CEGMTPEQPNLVSVLSAVR 234
Query: 219 QNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAK-CGCIFSASKLFEDISVERKNLV 277
G + IH K GF D+ V +++ Y K + SA K FE ++ +N
Sbjct: 235 HLGKPGILESIHVLVHKTGFER-DVVVGTAILNGYTKDVNMLDSAVKFFEGMAA--RNEY 291
Query: 278 SWTSIISGFAMHGMGKEAVENFGRMQKVGLK--PNRVTFLSVLNACSHGGLVEEGLNFFD 335
+W++II+ + G +A F Q+ LK P+R + L+ L + G +++ FD
Sbjct: 292 TWSTIIAALSQAGRIDDA---FAVYQRDPLKSVPSRTSMLTGL---ARYGRIDDAKILFD 345
Query: 336 KMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGN 395
++ E P++ + +I + +++AE +P + + W ++ + +G
Sbjct: 346 QIHE-----PNVVSWNAMITGYMQNEMVDEAEDLFNRMP--FRNTISWAGMIAGYARNGR 398
Query: 396 VE 397
E
Sbjct: 399 SE 400
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 97/375 (25%), Positives = 173/375 (46%), Gaps = 37/375 (9%)
Query: 73 DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLF 132
+ +T+S +I A LS AV + +S V T+++ G + D+ LF
Sbjct: 289 NEYTWSTII---AALSQAGRIDDAFAVYQRDPLKS-VPSRTSMLTGLARYGRIDDAKILF 344
Query: 133 DEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEAL- 191
D++ E N+V+WN MITG ++ ++ A LF MP RN +SW G+I GY R RS +AL
Sbjct: 345 DQIHEPNVVSWNAMITGYMQNEMVDEAEDLFNRMPFRNTISWAGMIAGYARNGRSEQALV 404
Query: 192 ---ALFRK-MVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLN 247
AL RK M+ + S + + A+ ++ + +H K G F+ V N
Sbjct: 405 SLQALHRKGMLPSLSSLTSSFFACSNIEAL------ETGKQVHSLAVKAG-CQFNSYVCN 457
Query: 248 CLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGL 307
LI Y K I S ++F+ ++V K+ VS+ S +S + + EA + F M
Sbjct: 458 ALITLYGKYRSIGSVRQIFDRMTV--KDTVSYNSFMSALVQNNLFDEARDVFNNMP---- 511
Query: 308 KPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAE 367
P+ V++ ++++AC+ E + F M+ E E LP+ L+ + G G + +
Sbjct: 512 SPDVVSWTTIISACAQADQGNEAVEIFRSMLHERE-LPNPPILTILLGLSGNLGAPQLGQ 570
Query: 368 K-----TALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKIL---------EMERGY 413
+ LG+ S + ++ CS ++++ + + + + + G
Sbjct: 571 QIHTIAIKLGMDSGLVVANALVSMYFKCSSADSLKVFDSMEERDIFTWNTIITGYAQHGL 630
Query: 414 GGDYVLMYNILAGVG 428
G + + MY ++ G
Sbjct: 631 GREAIRMYQLMVSAG 645
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 94/204 (46%), Gaps = 12/204 (5%)
Query: 122 LGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGY 181
LG L ++ ++FD MP R+++ WN MI G + RSL + + N+ + T ++ GY
Sbjct: 46 LGRLHEAREVFDSMPFRDIIAWNSMIFAYCNNGMPDAGRSLADAISGGNLRTGTILLSGY 105
Query: 182 TRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAF 241
R R +A +F M + + A++ QNGD+ + + R
Sbjct: 106 ARAGRVRDARRVFDGMGV-----RNTVAWNAMVTCYVQNGDITLARKLFDAMPSR----- 155
Query: 242 DIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGR 301
D+ N ++ Y + A LFE + +N VSWT +ISG+ + A + F
Sbjct: 156 DVSSWNTMLTGYCHSQLMEEARNLFE--RMPERNGVSWTVMISGYVLIEQHGRAWDMFRT 213
Query: 302 MQKVGLKPNRVTFLSVLNACSHGG 325
M G+ P + +SVL+A H G
Sbjct: 214 MLCEGMTPEQPNLVSVLSAVRHLG 237
>gi|242079743|ref|XP_002444640.1| hypothetical protein SORBIDRAFT_07g025280 [Sorghum bicolor]
gi|241940990|gb|EES14135.1| hypothetical protein SORBIDRAFT_07g025280 [Sorghum bicolor]
Length = 690
Score = 248 bits (632), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 155/486 (31%), Positives = 240/486 (49%), Gaps = 81/486 (16%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLF--DSFTYSFLIRTCATLS-H 89
L NTLL Y+L P A ++ + PL D+FTYSFLI+ AT
Sbjct: 174 LANTLLRAYALNSLPHAALAVFVDM------------PLRQRDTFTYSFLIKALATAGVT 221
Query: 90 PNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITG 149
P H + K+G +V AL++ Y L D+ K+FDEM R++V+WN +
Sbjct: 222 PVRAAHTH--VFKLGSVEDTFVGNALIDAYSKNDGLSDAKKVFDEMTTRDVVSWNTAMAA 279
Query: 150 LVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALAL---------------- 193
+V+ GE++ ARS+F+EMP ++ VSW ++DGY + + EA L
Sbjct: 280 MVRKGEVDAARSMFDEMPEKDTVSWNTMLDGYAKAGEAEEAFELFQRMPGRNVVSWSTVV 339
Query: 194 ---------------FRKMVA------------CE-----------YTEPSE-------I 208
F KM A C +TE E +
Sbjct: 340 SAYCKKGDMEMARVIFDKMPAKNLVTWTIMVSACAQKGLVGEAGRLFTEMKEAAIELDVV 399
Query: 209 TILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFED 268
++++L A ++G + + IH + +R + V N L+D + KCGC+ A +F D
Sbjct: 400 AVVSILAACAESGCLALGKRIHRHVRQRKLGRSTL-VCNALMDMFCKCGCVNRADYIF-D 457
Query: 269 ISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVE 328
+ K+ VSW II GFAMHG G++A+ F +M++ G P+ VT ++VL+AC+H GLVE
Sbjct: 458 TEIVEKDSVSWNIIIGGFAMHGHGEKALNLFTQMKQQGFHPDAVTLINVLSACTHMGLVE 517
Query: 329 EGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLG 388
EG FF M + + P+I+HYGC++D+LGR G +++A +P E + V+W +LL
Sbjct: 518 EGRRFFANMETDYGIKPEIEHYGCMVDLLGRGGLIKEAVDMIKSMPWEPNE-VIWGSLLS 576
Query: 389 ACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKV 448
AC H NVE E ++ ++ G+Y ++ NI A G++ D + R M + K
Sbjct: 577 ACRLHKNVEYAELAANELSNLQPSNAGNYAVLSNIYAEAGKWSDMAKARVQMKGTGSQKT 636
Query: 449 PGCSLV 454
G S +
Sbjct: 637 AGSSWI 642
>gi|449437962|ref|XP_004136759.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 591
Score = 248 bits (632), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 154/463 (33%), Positives = 244/463 (52%), Gaps = 60/463 (12%)
Query: 16 QIHSHLLTTNSLLHHSQLFNTLLHFYSLA-----------ESPQKAFLLYKQLQQIYTHS 64
QIH+ + T + + + NTL+ YS+ E P + + + L Q +T +
Sbjct: 131 QIHARSIKTGMVGFNVYVSNTLMRLYSVCGSIHDVQKVFDECPHRDLVSWTTLIQAFTKA 190
Query: 65 --HSPLPPLF----------DSFTYSFLIRTCATLSHPNLGTQLHAVISK-VGFQSHVYV 111
+S F D T ++ C+ L NLG ++H+ I + ++ V+V
Sbjct: 191 GLYSRAVEAFMEMCDLRLRADGRTLVVVLSACSNLGDLNLGQKVHSYIRHYIDMKADVFV 250
Query: 112 NTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNV 171
AL++MY+ K +L A +F+EMP +NV
Sbjct: 251 GNALLDMYL-------------------------------KCDDLNSAYKVFDEMPVKNV 279
Query: 172 VSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHG 231
V+W +I G R EAL FR M+ + +P E+T++ VL + G ++ + +H
Sbjct: 280 VTWNAMISGLAYQGRYREALDTFR-MMQDKGVKPDEVTLVGVLNSCANLGVLEIGKWVHA 338
Query: 232 YGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGM 291
Y +R D V N L+D YAKCG I A ++FE S++R+++ S+T++I G A+HG
Sbjct: 339 Y-MRRNHILADKFVGNALLDMYAKCGSIDEAFRVFE--SMKRRDVYSYTAMIFGLALHGE 395
Query: 292 GKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYG 351
A + F M +VG++PN VTFL +L ACSHGGLV EG +F +M ++ ++ P +HYG
Sbjct: 396 ANWAFQVFSEMFRVGIEPNEVTFLGLLMACSHGGLVAEGKKYFFQMSDKYKLRPQAEHYG 455
Query: 352 CLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMER 411
C+ID+LGRAG +++AE+ + DV LLGAC HGNV++GE V +K+ E++
Sbjct: 456 CMIDLLGRAGLVKEAEEIIHKMEIR-PDVFACGALLGACRIHGNVDIGESVMQKLTELDP 514
Query: 412 GYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
G Y+LM N+ + V R+ DA ++R+ M + K PGCSL+
Sbjct: 515 DEEGTYILMTNLYSSVHRWKDALKIRKTMKNKKMRKTPGCSLI 557
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 103/231 (44%), Gaps = 6/231 (2%)
Query: 204 EPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSAS 263
EP TI VL A+ ++ Q IH K G F++ V N L+ Y+ CG I
Sbjct: 107 EPDGFTIPLVLKALALIQGIREGQQIHARSIKTGMVGFNVYVSNTLMRLYSVCGSIHDVQ 166
Query: 264 KLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSH 323
K+F++ ++LVSWT++I F G+ AVE F M + L+ + T + VL+ACS+
Sbjct: 167 KVFDE--CPHRDLVSWTTLIQAFTKAGLYSRAVEAFMEMCDLRLRADGRTLVVVLSACSN 224
Query: 324 GGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVW 383
G + G + ++ D+ L+DM + L A K +P + +VV W
Sbjct: 225 LGDLNLGQKVHSYIRHYIDMKADVFVGNALLDMYLKCDDLNSAYKVFDEMP--VKNVVTW 282
Query: 384 RTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAE 434
++ ++ G R + ++G D V + +L G E
Sbjct: 283 NAMISGLAYQGRYREALDTFR--MMQDKGVKPDEVTLVGVLNSCANLGVLE 331
>gi|297737154|emb|CBI26355.3| unnamed protein product [Vitis vinifera]
Length = 550
Score = 248 bits (632), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 158/510 (30%), Positives = 258/510 (50%), Gaps = 63/510 (12%)
Query: 1 MHILQNSQTPNNITTQIHSHLLTTNSLLHHSQLFNTLLHFYSLAESPQKAFLLYKQLQQI 60
+HI+ N +T ++ + IH+ LL +S+ + N LL YS + A ++ ++ Q
Sbjct: 6 LHIIHNCKTLKSLKS-IHARLLIESSVASSEFVINKLLRLYSRFGATDYAHKVFDEITQP 64
Query: 61 YTHSHSPL-----------------------PPLFDSFTYSFLIRTCATLSHPNLGTQLH 97
+ + L P +FT S +++ A L+ G ++
Sbjct: 65 NAYLWTSLIHGYVENRQYDEAFSLFIQMRREPISVLNFTISSVLKALARLTRFKGGQAVY 124
Query: 98 A----------------VISKVGFQSHVYVN---------------TALVNMYVSLGFLK 126
+IS G V + T+++ YV G +
Sbjct: 125 GFAFDEMCEKDIVSWNMMISGYGNNDRVDIARKFFDRMPERNVVSWTSMICGYVKAGDMA 184
Query: 127 DSSKLFDEMPERNLVTWNVMITGLVKWGEL-EFARSLFEEMPCRNVVSWTGIIDGYTRMN 185
++ LFD MP ++L +WNVM++G + G+ AR LF++MP +N+V+W+ +I GY R
Sbjct: 185 EAQVLFDSMPVKDLASWNVMVSGYMDIGDYTNGARCLFDQMPMKNLVTWSTMIGGYARNG 244
Query: 186 RSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQ-LIHGYGEKRGFTAFDIR 244
+ +AL LF + + +P E IL ++ A Q G + + + +IH Y + D+R
Sbjct: 245 QPLKALELFERFKEQD-IKPDETFILGIISACSQLGIIDAAESIIHNYVGPSLLS--DLR 301
Query: 245 VLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQK 304
V LID YAKCG I A ++FE K+L+ ++++I+ A HG+G++A+ F +MQ+
Sbjct: 302 VFTSLIDMYAKCGSIEKALQMFE--MAHPKDLLCYSTMIAALANHGLGRDAIFLFDKMQR 359
Query: 305 VGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLE 364
+KP+ VTFL VL AC+HGGLV+EG +F +M EE + P KHY C++D+LGR G LE
Sbjct: 360 ANIKPDSVTFLGVLTACNHGGLVDEGRKYFKQMTEEFGIQPSEKHYACVVDLLGRVGCLE 419
Query: 365 QAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNIL 424
+A +P VVW LL AC H NV++ E ++ ++E G+Y+L+ NI
Sbjct: 420 EAYNLIRNMPIA-PHSVVWGALLAACRVHCNVQLAEVAAAELFKIEPDNSGNYILLSNIY 478
Query: 425 AGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
A GR+G ++R + E K G S +
Sbjct: 479 AAAGRWGSVAKVRAKIREHRVRKNRGSSWI 508
>gi|449477559|ref|XP_004155057.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
Length = 562
Score = 247 bits (631), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 147/406 (36%), Positives = 219/406 (53%), Gaps = 43/406 (10%)
Query: 53 LYKQLQQIYT----HSHSPLPPLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSH 108
L K L +Y H S LP DS T+ +++ A L +G +H ++ ++GF
Sbjct: 67 LNKHLNSLYIFALMHKFSILP---DSSTFPAVLKATAQLCDTGVGKMIHGIVIQMGFICD 123
Query: 109 VYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPC 168
VY +TALV++Y + + D+S+LFDE MP
Sbjct: 124 VYTSTALVHLYCTCLSISDASQLFDE-------------------------------MPE 152
Query: 169 RNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQL 228
RN V+W +I GYT + +A+ FR M+A + +PSE T++ VL A G +
Sbjct: 153 RNAVTWNALITGYTHNRKFVKAIDAFRGMLA-DGAQPSERTVVVVLSACSHLGAFNQGKW 211
Query: 229 IHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAM 288
IH + ++ V LID YAKCG ++ K+FE+I KN+ +W +ISG+AM
Sbjct: 212 IHEFIYHNRLR-LNVFVGTALIDMYAKCGAVYEVEKVFEEI--REKNVYTWNVLISGYAM 268
Query: 289 HGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIK 348
+G G A++ F RM KP+ VTFL VL AC H GLV EG F M ++ + P I+
Sbjct: 269 NGQGDAALQAFSRMLMENFKPDEVTFLGVLCACCHQGLVTEGRWQFMSMKQQFGLQPRIE 328
Query: 349 HYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILE 408
HYGC++D+LGRAG LE+A + + E D ++WR LL AC HGN ++GE + ++++E
Sbjct: 329 HYGCMVDLLGRAGLLEEALELIQSMSIE-PDPIIWRALLCACRVHGNTKLGEYIIKRLIE 387
Query: 409 MERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
+E G +YVL+ NI + R+ + +LR +M R KVPGCS +
Sbjct: 388 LEPNNGENYVLLSNIYSRERRWAEVGKLRGMMSLRGIRKVPGCSSI 433
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 107/233 (45%), Gaps = 7/233 (3%)
Query: 175 TGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGE 234
+I Y +N+ +L +F M P T AVL A Q D ++IHG
Sbjct: 58 NSMIRTYLDLNKHLNSLYIFALMHKFSIL-PDSSTFPAVLKATAQLCDTGVGKMIHGIVI 116
Query: 235 KRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKE 294
+ GF D+ L+ Y C I AS+LF+++ +N V+W ++I+G+ + +
Sbjct: 117 QMGFIC-DVYTSTALVHLYCTCLSISDASQLFDEMP--ERNAVTWNALITGYTHNRKFVK 173
Query: 295 AVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLI 354
A++ F M G +P+ T + VL+ACSH G +G + + + + ++ LI
Sbjct: 174 AIDAFRGMLADGAQPSERTVVVVLSACSHLGAFNQG-KWIHEFIYHNRLRLNVFVGTALI 232
Query: 355 DMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKIL 407
DM + G + + EK I + +V W L+ + +G + + ++L
Sbjct: 233 DMYAKCGAVYEVEKVFEEIREK--NVYTWNVLISGYAMNGQGDAALQAFSRML 283
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/301 (23%), Positives = 126/301 (41%), Gaps = 58/301 (19%)
Query: 23 TTNSLLHHSQLFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSF------- 75
T S+ SQLF+ E P++ + + L YTH+ + + D+F
Sbjct: 136 TCLSISDASQLFD---------EMPERNAVTWNALITGYTHNRKFVKAI-DAFRGMLADG 185
Query: 76 ------TYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSS 129
T ++ C+ L N G +H I + +V+V TAL++MY G + +
Sbjct: 186 AQPSERTVVVVLSACSHLGAFNQGKWIHEFIYHNRLRLNVFVGTALIDMYAKCGAVYEVE 245
Query: 130 KLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNE 189
K+F+E+ E+N+ TWNV+I+ GY + +
Sbjct: 246 KVFEEIREKNVYTWNVLIS-------------------------------GYAMNGQGDA 274
Query: 190 ALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCL 249
AL F +M+ E +P E+T L VL A G V + +++ I C+
Sbjct: 275 ALQAFSRMLM-ENFKPDEVTFLGVLCACCHQGLVTEGRWQFMSMKQQFGLQPRIEHYGCM 333
Query: 250 IDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKP 309
+D + G + A +L + +S+E ++ W +++ +HG K R+ + L+P
Sbjct: 334 VDLLGRAGLLEEALELIQSMSIEPDPII-WRALLCACRVHGNTKLGEYIIKRL--IELEP 390
Query: 310 N 310
N
Sbjct: 391 N 391
>gi|449434194|ref|XP_004134881.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 436
Score = 247 bits (631), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 143/403 (35%), Positives = 233/403 (57%), Gaps = 19/403 (4%)
Query: 44 AESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKV 103
A S KA Y Q+ + +P DSF+ F+++ CA+ ++ ++ LHA I+K+
Sbjct: 34 APSLHKALAFYSQMHR------QSVP--HDSFSILFMLKACASSNNLSILHHLHAHITKL 85
Query: 104 GFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLF 163
GF +HV+V T+L++ YV F + + +FDEMP +N VTWN MI+G K G++ AR LF
Sbjct: 86 GFTTHVFVATSLLHSYVLHSF-QLARLVFDEMPHKNSVTWNTMISGYSKAGDVHTARQLF 144
Query: 164 EEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDV 223
+ MP R++ SW+ +I Y AL LF+ M+ P ++ ++L G +
Sbjct: 145 DRMPSRDLASWSAMIAAYINNRNYRGALLLFQDMI-INGINPDQMAAGSILNGCAHMGSL 203
Query: 224 K--SCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTS 281
+ + +HG+ K + ++ + L+D YAKCG + A ++F +S +N+ +WT+
Sbjct: 204 GLLAGKSVHGFVVKNRWE-LNLELGTVLVDMYAKCGFLKYACQIFNLMS--ERNVRTWTA 260
Query: 282 IISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEEC 341
+I G A HG KEA+ F M+ G++PN TF VL+AC H GLV+EG +F+ M+EEC
Sbjct: 261 LICGLAHHGCCKEALVLFETMRHEGVEPNEFTFTGVLSACVHAGLVQEGRKYFN-MIEEC 319
Query: 342 EVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGER 401
+ I+HYGC +D+LGR+G LE+A + E +V+VW +LL AC H + ++ ER
Sbjct: 320 GLEIRIQHYGCFVDLLGRSGLLEEAYGVIKSMRLE-PNVIVWSSLLSACKQHKSFDLAER 378
Query: 402 VTRKILEM--ERGYGGDYVLMYNILAGVGRFGDAERLRRVMDE 442
V +ILE + G Y L+ ++ ++ DAE +R ++++
Sbjct: 379 VIEQILEKIEPDNHAGVYSLVSDLYVLQDKWDDAENIRNLLNQ 421
>gi|347954502|gb|AEP33751.1| chloroplast biogenesis 19, partial [Lepidium virginicum]
Length = 485
Score = 247 bits (631), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 139/384 (36%), Positives = 217/384 (56%), Gaps = 9/384 (2%)
Query: 75 FTYSFLIRTCATL--SHPNLGTQLHAVISKVGFQ-SHVYVNTALVNMYVSLGFLKDSSKL 131
T+ L+ C LG LH K+G + SHV V TA++ MY G L+ + +
Sbjct: 57 ITFIALLSACGNFPSGSEGLGYLLHGYACKLGLERSHVMVGTAILGMYSKSGHLRKARLV 116
Query: 132 FDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEAL 191
FD + ++N VTWN MI G ++ G+++ A +F++MP R+++SWT +I G+ + EAL
Sbjct: 117 FDYIEDKNSVTWNTMIDGYMRNGQVDNAVDVFDKMPDRDLISWTAMITGFVKKGFHEEAL 176
Query: 192 ALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLID 251
A FR+M P + I++ + A G + +H Y + F ++RV N LID
Sbjct: 177 AWFREM-QISGVNPDYVAIISAVAACTNLGALSFGLWVHRYVLSQDFRN-NVRVSNSLID 234
Query: 252 TYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNR 311
Y +CGC+ A ++F+ + E++ +VSW S+I GFA +G E++ F +MQ+ G P+
Sbjct: 235 LYCRCGCVEFARQVFDKM--EKRTVVSWNSVIVGFAANGNANESLVYFRKMQREGFTPDG 292
Query: 312 VTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTAL 371
VTF L ACSH GLVEEG +F M + + P I+HYGCL+D+ RAGRLE A
Sbjct: 293 VTFTGALTACSHVGLVEEGFQYFQMMKHDYRISPRIEHYGCLVDLYSRAGRLEDAFIVVE 352
Query: 372 GIPSEITDVVVWRTLLGACSFHGN-VEMGERVTRKILEMERGYGGDYVLMYNILAGVGRF 430
+P + +VV+ +LL AC HGN + ER+ + I +++ +YV++ N+ A G++
Sbjct: 353 SMPMKPNEVVI-GSLLAACRNHGNHTILAERLMKYITDLDVKSHSNYVILSNMYAADGKW 411
Query: 431 GDAERLRRVMDERNAFKVPGCSLV 454
A ++RR M K PG S +
Sbjct: 412 EGASKMRRKMKGLGLKKQPGYSSI 435
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 125/295 (42%), Gaps = 37/295 (12%)
Query: 171 VVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAI--WQNGDVKSCQL 228
+VSWT I +R R EA+ F M EP+ IT +A+L A + +G L
Sbjct: 21 IVSWTSRITLLSRDGRLAEAVREFSDMRLAG-IEPNHITFIALLSACGNFPSGSEGLGYL 79
Query: 229 IHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDI------------------- 269
+HGY K G + V ++ Y+K G + A +F+ I
Sbjct: 80 LHGYACKLGLERSHVMVGTAILGMYSKSGHLRKARLVFDYIEDKNSVTWNTMIDGYMRNG 139
Query: 270 ----------SVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLN 319
+ ++L+SWT++I+GF G +EA+ F MQ G+ P+ V +S +
Sbjct: 140 QVDNAVDVFDKMPDRDLISWTAMITGFVKKGFHEEALAWFREMQISGVNPDYVAIISAVA 199
Query: 320 ACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITD 379
AC++ G + GL + + V + +++ LID+ R G +E A + + E
Sbjct: 200 ACTNLGALSFGL-WVHRYVLSQDFRNNVRVSNSLIDLYCRCGCVEFARQVFDKM--EKRT 256
Query: 380 VVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAE 434
VV W +++ + +GN RK+ G+ D V L G E
Sbjct: 257 VVSWNSVIVGFAANGNANESLVYFRKM--QREGFTPDGVTFTGALTACSHVGLVE 309
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 68/140 (48%), Gaps = 6/140 (4%)
Query: 274 KNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNF 333
+ +VSWTS I+ + G EAV F M+ G++PN +TF+++L+AC + EGL +
Sbjct: 19 ETIVSWTSRITLLSRDGRLAEAVREFSDMRLAGIEPNHITFIALLSACGNFPSGSEGLGY 78
Query: 334 FDKMVEECEVLPDIKHY---GCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGAC 390
C++ + H ++ M ++G L +A I E + V W T++
Sbjct: 79 LLHGY-ACKLGLERSHVMVGTAILGMYSKSGHLRKARLVFDYI--EDKNSVTWNTMIDGY 135
Query: 391 SFHGNVEMGERVTRKILEME 410
+G V+ V K+ + +
Sbjct: 136 MRNGQVDNAVDVFDKMPDRD 155
>gi|414879404|tpg|DAA56535.1| TPA: pentatricopeptide repeat protein PPR868-14 [Zea mays]
Length = 544
Score = 247 bits (631), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 150/423 (35%), Positives = 234/423 (55%), Gaps = 24/423 (5%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+N LL Y++A A L+ ++ +TH T++ LIR A
Sbjct: 125 YNALLAGYAVAGDMDGALALFGGMRS-WTH-----------VTWATLIRGFAEKGDMAEA 172
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
+ + G ++ V T LV YV G ++ + ++FD MP RN W+ M+TG K
Sbjct: 173 RRWFEA-TPPGMRT-VVTWTVLVQGYVCAGDMETAREVFDRMPARNAFVWSSMVTGYFKA 230
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
G+ E AR++F+ +P RN+V+W +I GY ++ S +AL F M+ E +P E T+ ++
Sbjct: 231 GDAEEARAVFDRIPTRNLVNWNALIAGYAQIGCSEQALEAFHLMLQ-ERVKPDEFTMASL 289
Query: 214 LPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVER 273
L A Q G ++ + +H + + V+N LID YAKCG + A +F+ S+
Sbjct: 290 LSACAQLGSLEQGKKVHDFINQEHIRKNHF-VMNGLIDMYAKCGDLAHARYIFD--SMRW 346
Query: 274 KNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNF 333
KN W ++IS A HG EA+ F +M++ G KPN +T L+VL AC+HGG V+EGL
Sbjct: 347 KNNECWNTMISALASHGQSDEALHLFFQMERSGRKPNTITVLAVLGACTHGGFVDEGLQI 406
Query: 334 FDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFH 393
F+K+ + V ++HYGCL+D+LGRAG+L++A + + SE + V+W +LLGAC H
Sbjct: 407 FNKL-DAYGVEAGVEHYGCLVDLLGRAGKLKEAYEIVNNM-SEEPNEVIWGSLLGACRVH 464
Query: 394 GNVEMGERVTRKILEMERGYG----GDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVP 449
+ EM VT +IL + + +Y+++ NI+A R+ AE++RR M R K P
Sbjct: 465 RDAEMSRLVTEEILRLHSFHASSNDAEYIMLANIMAASERWEQAEQMRRKMARRGVEKTP 524
Query: 450 GCS 452
GCS
Sbjct: 525 GCS 527
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 110/405 (27%), Positives = 188/405 (46%), Gaps = 35/405 (8%)
Query: 12 NITTQIHSHLLTTNSLLHHSQLFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPL 71
N +H+ +T++S H + L+ Y+ ++A L+Y + TH H PL P+
Sbjct: 3 NRARPLHAIYMTSSS--HDPDKWAHLVKEYASQSLVREAALVYARNLPRRTH-HQPLLPV 59
Query: 72 FDSFTYSFLIRTCATLSHPNLG--TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSS 129
L++ A S LG LHA K F + V T +V+MY G L D+
Sbjct: 60 --------LLKAAAASSPAELGLGKSLHAEALKSAFARDLLVGTTIVSMYCKCGALADAR 111
Query: 130 KLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNE 189
+ FDEMP+RN++++N ++ G G+++ A +LF M V+W +I G+ E
Sbjct: 112 RAFDEMPDRNVISYNALLAGYAVAGDMDGALALFGGMRSWTHVTWATLIRGFAEKGDMAE 171
Query: 190 ALALFRKMVACEYTEPSEITILA---VLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVL 246
A F E T P T++ ++ GD+++ + + R AF V
Sbjct: 172 ARRWF------EATPPGMRTVVTWTVLVQGYVCAGDMETAREVFDRMPAR--NAF---VW 220
Query: 247 NCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVG 306
+ ++ Y K G A +F+ I +NLV+W ++I+G+A G ++A+E F M +
Sbjct: 221 SSMVTGYFKAGDAEEARAVFDRIPT--RNLVNWNALIAGYAQIGCSEQALEAFHLMLQER 278
Query: 307 LKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQA 366
+KP+ T S+L+AC+ G +E+G D + +E + + LIDM + G L A
Sbjct: 279 VKPDEFTMASLLSACAQLGSLEQGKKVHDFINQE-HIRKNHFVMNGLIDMYAKCGDLAHA 337
Query: 367 EKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMER 411
+ + + W T++ A + HG + +MER
Sbjct: 338 RYIFDSMRWKNNE--CWNTMISALASHGQ---SDEALHLFFQMER 377
>gi|357440933|ref|XP_003590744.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479792|gb|AES60995.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 795
Score = 247 bits (631), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 138/395 (34%), Positives = 220/395 (55%), Gaps = 23/395 (5%)
Query: 73 DSFTYSFLIRTCATLSHP----NLGTQLHAVISKVGFQ-SHVYV---NTALVNMYVSLGF 124
D +TY+ LI C + + N G Q+H I + + SH +V N AL+ Y
Sbjct: 282 DEYTYTSLISACGSCNEKMGMFNCGRQVHGYILRTVVEPSHHFVLSVNNALITFYTKYDR 341
Query: 125 LKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRM 184
+ ++ ++FD+MP R++++WN +++G V +E A S+F EMP RNV++WT +I G +
Sbjct: 342 MIEARRVFDKMPVRDIISWNAVLSGYVNAQRIEEANSIFSEMPERNVLTWTVMISGLAQN 401
Query: 185 NRSNEALALFRKMVA-----CEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFT 239
E L LF +M + C+Y IT +VL ++ NG Q+I G G +
Sbjct: 402 GFGEEGLKLFNQMKSEGLEPCDYAFAGAITACSVLGSL-DNGQQIHSQVIR-LGHDSGLS 459
Query: 240 AFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENF 299
A N LI Y++CG + SA +F +++ + VSW ++I+ A HG G +A+E F
Sbjct: 460 AG-----NALITMYSRCGVVESAESVF--LTMPYVDSVSWNAMIAALAQHGHGVKAIELF 512
Query: 300 GRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGR 359
+M K + P+R+TFL++L AC+H GL++EG ++FD M + P HY LID+L R
Sbjct: 513 EQMMKEDILPDRITFLTILTACNHAGLIKEGRHYFDTMCTRYGITPGEDHYARLIDLLCR 572
Query: 360 AGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVL 419
AG +A+ +P E +W LL C HGN+E+G + ++LE+ G G Y++
Sbjct: 573 AGMFLKAQSVIKSMPFE-AGAPIWEALLAGCRIHGNMELGIQAADRLLELIPGQDGTYII 631
Query: 420 MYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
+ N+ A +G++ + R+R +M ER K PGCS V
Sbjct: 632 LSNMYAALGQWDEVARVRLLMRERGVKKEPGCSWV 666
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 93/407 (22%), Positives = 167/407 (41%), Gaps = 85/407 (20%)
Query: 74 SFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFD 133
Y +L + + + +HA I GF+ + ++ L+N+Y + + KLFD
Sbjct: 5 DLAYRYLTQLNHVSTTQIIARAVHAHILTSGFKPNTFILNRLINIYCKSSNITYARKLFD 64
Query: 134 EMPERNLVTWNVMITGLVKWGELEFARSLFEEMP--CRNVVSWTGIIDGYTRMNRSNEAL 191
++P+ ++V +++ G ++ A+ LF P R+ VS+ +I Y+ N + AL
Sbjct: 65 KIPKPDIVARTTLLSAYSSSGNVKLAQQLFNATPLTIRDTVSYNAMITAYSHGNDGHAAL 124
Query: 192 ALFRKMVACEYTEPSEITILAVLPAIWQNGD-VKSCQLIHGYGEKRGFTAFDIRVLNCLI 250
LF +M + P T +VL A+ D + CQ++H K G T V N L+
Sbjct: 125 NLFVQMKRYGFL-PDPFTFSSVLSALSLIADEERHCQMLHCEVIKLG-TLLIPSVTNALL 182
Query: 251 DTYAKCGC---------IFSASKLF-----------------------EDISVERKNL-- 276
Y C + SA K+F +D+ R+ L
Sbjct: 183 SCYVCCASSPLVKSSQLMASARKVFDETPKNQIYEPSWTTMIAGYVRNDDLVAARELLDG 242
Query: 277 ------VSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACS-------- 322
V+W ++ISG+ G+ +EA + F RM +G++ + T+ S+++AC
Sbjct: 243 LTYPIDVAWNAMISGYVRRGLYEEAFDTFRRMHSMGIQEDEYTYTSLISACGSCNEKMGM 302
Query: 323 -------HG----GLVEEGLNF--------------FDKMVEECEVLP-----DIKHYGC 352
HG +VE +F +D+M+E V DI +
Sbjct: 303 FNCGRQVHGYILRTVVEPSHHFVLSVNNALITFYTKYDRMIEARRVFDKMPVRDIISWNA 362
Query: 353 LIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMG 399
++ A R+E+A +P +V+ W ++ + +G E G
Sbjct: 363 VLSGYVNAQRIEEANSIFSEMPER--NVLTWTVMISGLAQNGFGEEG 407
>gi|449476598|ref|XP_004154781.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39350-like [Cucumis sativus]
Length = 709
Score = 247 bits (631), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 146/463 (31%), Positives = 234/463 (50%), Gaps = 53/463 (11%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+NT++ + P++A ++ + + + P DS T + +C L LG
Sbjct: 253 WNTMISGWFQNGRPEEALAVFNSMMD------ARVEP--DSATIVSALPSCGYLKELELG 304
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
++H ++ K Q + V ALV+MY G + ++S +F E E++++TW MI G +
Sbjct: 305 IKVHKLVQKNHLQEKIEVRNALVDMYSRCGGIDEASLVFAETKEKDVITWTSMINGYIMN 364
Query: 154 GELEFARSL------------------------------------------FEEMPCRNV 171
G + A +L F + +
Sbjct: 365 GNAKSALALCPAMQLDGVVPNAVTLASLLSACASLCYMYAKCNAVSYSFQVFAKTSKKRT 424
Query: 172 VSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHG 231
V W ++ G + EA+ LF+ M+ E E + T +V+PA D+K +H
Sbjct: 425 VPWNALLSGLIHNELAREAVGLFKSML-IEEVEANHATFNSVIPAYAILADLKQVMNLHS 483
Query: 232 YGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGM 291
Y + GF + I V+ LID Y+KCG + A K+F++I + K+++ W+ +I+G+ MHG
Sbjct: 484 YLVRSGFIS-KIAVITGLIDMYSKCGSLDYAHKIFDEIPNKEKDIIVWSVLIAGYGMHGH 542
Query: 292 GKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYG 351
G+ AV F +M G++PN +TF SVL+ACSH GLV++GL F M+E P HY
Sbjct: 543 GETAVLLFNQMVHSGMQPNEITFTSVLHACSHRGLVDDGLTLFKYMIENYPSSPLPNHYT 602
Query: 352 CLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMER 411
C++D+LGRAGRL++A +P + + +W LLGAC H NVE+GE ++ E+E
Sbjct: 603 CVVDLLGRAGRLDEAYDLIKSMPFQ-QNHSIWGALLGACLIHQNVELGEVAAERLFELEP 661
Query: 412 GYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
G+Y+L+ NI A VGR+ DAE +R +M + K P S V
Sbjct: 662 ESTGNYILLANIYAAVGRWKDAENVRHIMSKIGLRKTPAQSSV 704
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 106/400 (26%), Positives = 168/400 (42%), Gaps = 113/400 (28%)
Query: 73 DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLF 132
D +T+ +I+ C+ +S N+G +H GF S+++V +L+ MY++ G
Sbjct: 183 DKYTFPLVIKACSVMSMLNVGVLIHGRALVSGFSSNMFVQNSLLAMYMNCG--------- 233
Query: 133 DEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALA 192
++ AR +F M R+VVSW +I G+ + R EALA
Sbjct: 234 ----------------------KVGLARQVFNVMLKRSVVSWNTMISGWFQNGRPEEALA 271
Query: 193 LFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQL---IHGYGEKRGFTAFDIRVLNCL 249
+F M+ EP TI++ LP+ G +K +L +H +K I V N L
Sbjct: 272 VFNSMMDAR-VEPDSATIVSALPSC---GYLKELELGIKVHKLVQKNHLQE-KIEVRNAL 326
Query: 250 IDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKP 309
+D Y++CG I AS +F + + K++++WTS+I+G+ M+G K A+ MQ G+ P
Sbjct: 327 VDMYSRCGGIDEASLVFAE--TKEKDVITWTSMINGYIMNGNAKSALALCPAMQLDGVVP 384
Query: 310 NRVTFLSVLNACS--------------------------------------HGGLVEEGL 331
N VT S+L+AC+ H L E +
Sbjct: 385 NAVTLASLLSACASLCYMYAKCNAVSYSFQVFAKTSKKRTVPWNALLSGLIHNELAREAV 444
Query: 332 NFFDKM-VEECE--------------VLPDIKHY-------------------GCLIDML 357
F M +EE E +L D+K LIDM
Sbjct: 445 GLFKSMLIEEVEANHATFNSVIPAYAILADLKQVMNLHSYLVRSGFISKIAVITGLIDMY 504
Query: 358 GRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVE 397
+ G L+ A K IP++ D++VW L+ HG+ E
Sbjct: 505 SKCGSLDYAHKIFDEIPNKEKDIIVWSVLIAGYGMHGHGE 544
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 121/244 (49%), Gaps = 6/244 (2%)
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
G + AR LF+++ ++ W II Y +AL +F M+ P + T V
Sbjct: 131 GCVPLARKLFDDLSDPSLFLWNAIIKMYVDKGFHFDALRVFDSMICSGKFWPDKYTFPLV 190
Query: 214 LPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVER 273
+ A + LIHG GF++ ++ V N L+ Y CG + A ++F + +
Sbjct: 191 IKACSVMSMLNVGVLIHGRALVSGFSS-NMFVQNSLLAMYMNCGKVGLARQVFN--VMLK 247
Query: 274 KNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNF 333
+++VSW ++ISG+ +G +EA+ F M ++P+ T +S L +C + +E G+
Sbjct: 248 RSVVSWNTMISGWFQNGRPEEALAVFNSMMDARVEPDSATIVSALPSCGYLKELELGIK- 306
Query: 334 FDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFH 393
K+V++ + I+ L+DM R G +++A + + ++ DV+ W +++ +
Sbjct: 307 VHKLVQKNHLQEKIEVRNALVDMYSRCGGIDEA--SLVFAETKEKDVITWTSMINGYIMN 364
Query: 394 GNVE 397
GN +
Sbjct: 365 GNAK 368
Score = 44.7 bits (104), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 55/108 (50%), Gaps = 5/108 (4%)
Query: 227 QLIHGYGEKRGF--TAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIIS 284
+++HG+ G + I + + L +YA CGC+ A KLF+D+S +L W +II
Sbjct: 99 KILHGHTITSGLLHSPNFIHLPSHLAVSYAFCGCVPLARKLFDDLS--DPSLFLWNAIIK 156
Query: 285 GFAMHGMGKEAVENFGRMQKVG-LKPNRVTFLSVLNACSHGGLVEEGL 331
+ G +A+ F M G P++ TF V+ ACS ++ G+
Sbjct: 157 MYVDKGFHFDALRVFDSMICSGKFWPDKYTFPLVIKACSVMSMLNVGV 204
>gi|62320406|dbj|BAD94843.1| putative protein [Arabidopsis thaliana]
Length = 720
Score = 247 bits (631), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 142/424 (33%), Positives = 226/424 (53%), Gaps = 20/424 (4%)
Query: 35 NTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLGT 94
NTLL YS A +++++ +Y+ +I A
Sbjct: 184 NTLLDMYSKCGDLDSAKAVFREMSDRSV------------VSYTSMIAGYAREGLAGEAV 231
Query: 95 QLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNL----VTWNVMITGL 150
+L + + G VY TA++N L + ++ + + E +L N ++
Sbjct: 232 KLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMY 291
Query: 151 VKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITI 210
K G ++ A +F EM ++++SW II GY++ +NEAL+LF ++ + P E T+
Sbjct: 292 AKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTV 351
Query: 211 LAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDIS 270
VLPA + IHGY + G+ + D V N L+D YAKCG + A LF+DI+
Sbjct: 352 ACVLPACASLSAFDKGREIHGYIMRNGYFS-DRHVANSLVDMYAKCGALLLAHMLFDDIA 410
Query: 271 VERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEG 330
K+LVSWT +I+G+ MHG GKEA+ F +M++ G++ + ++F+S+L ACSH GLV+EG
Sbjct: 411 --SKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEG 468
Query: 331 LNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGAC 390
FF+ M EC++ P ++HY C++DML R G L +A + +P D +W LL C
Sbjct: 469 WRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIP-PDATIWGALLCGC 527
Query: 391 SFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPG 450
H +V++ E+V K+ E+E G YVLM NI A ++ +RLR+ + +R K PG
Sbjct: 528 RIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPG 587
Query: 451 CSLV 454
CS +
Sbjct: 588 CSWI 591
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 99/363 (27%), Positives = 174/363 (47%), Gaps = 56/363 (15%)
Query: 73 DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLF 132
DS+T+S + ++ ++L + G QLH I K GF V +LV Y+
Sbjct: 43 DSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYL------------ 90
Query: 133 DEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALA 192
K ++ AR +F+EM R+V+SW II+GY + + L+
Sbjct: 91 -------------------KNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLS 131
Query: 193 LFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDT 252
+F +M+ E TI++V + + + +H G K F+ D R N L+D
Sbjct: 132 VFVQMLV-SGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSRED-RFCNTLLDM 189
Query: 253 YAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRV 312
Y+KCG + SA +F ++S +++VS+TS+I+G+A G+ EAV+ F M++ G+ P+
Sbjct: 190 YSKCGDLDSAKAVFREMS--DRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVY 247
Query: 313 TFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALG 372
T +VLN C+ L++EG + ++E ++ DI L+DM + G +++AE +
Sbjct: 248 TVTAVLNCCARYRLLDEGKRVHE-WIKENDLGFDIFVSNALMDMYAKCGSMQEAE--LVF 304
Query: 373 IPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGD 432
+ D++ W T++G S + Y + + ++N+L RF
Sbjct: 305 SEMRVKDIISWNTIIGGYS------------------KNCYANEALSLFNLLLEEKRFSP 346
Query: 433 AER 435
ER
Sbjct: 347 DER 349
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 112/234 (47%), Gaps = 11/234 (4%)
Query: 163 FEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGD 222
F+E+ + W +++ + + ++ LF+KM++ E T V +
Sbjct: 1 FDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMS-SGVEMDSYTFSCVSKSFSSLRS 59
Query: 223 VKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSI 282
V + +HG+ K GF + V N L+ Y K + SA K+F++++ ++++SW SI
Sbjct: 60 VHGGEQLHGFILKSGFGERN-SVGNSLVAFYLKNQRVDSARKVFDEMT--ERDVISWNSI 116
Query: 283 ISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECE 342
I+G+ +G+ ++ + F +M G++ + T +SV C+ L+ G V+ C
Sbjct: 117 INGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACF 176
Query: 343 VLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITD--VVVWRTLLGACSFHG 394
D + L+DM + G L+ A+ + E++D VV + +++ + G
Sbjct: 177 SRED-RFCNTLLDMYSKCGDLDSAK----AVFREMSDRSVVSYTSMIAGYAREG 225
>gi|222623259|gb|EEE57391.1| hypothetical protein OsJ_07563 [Oryza sativa Japonica Group]
Length = 748
Score = 247 bits (631), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 134/386 (34%), Positives = 219/386 (56%), Gaps = 7/386 (1%)
Query: 70 PLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSS 129
P + F Y ++R + L +H K GF H ++ T+L++ Y G + D+
Sbjct: 329 PAPNQFVYPLVLRAACAIG-VQLVRSIHCHACKDGFYGHDFIRTSLLDGYSRYGMMGDAR 387
Query: 130 KLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNE 189
KLFD + +RN+V+W +++G + G++ A LFE MP R+V +W II G T+ E
Sbjct: 388 KLFDGLTDRNVVSWTALVSGYARAGKVGDAIVLFERMPQRDVPAWNAIIAGCTQNGLFVE 447
Query: 190 ALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCL 249
A+ +FR+MV E P+ T+ +L A G +K ++IHGY R F V+N L
Sbjct: 448 AVGIFRRMVD-EGFRPNGTTVSCLLSACGHLGMLKIGKVIHGYA-WRSCVGFGSSVVNGL 505
Query: 250 IDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKP 309
ID Y KCG + A +F+ S + L +W S+I+ A+HG + A+ F M+ G++P
Sbjct: 506 IDMYGKCGNLMEAKWIFDAFS--DRGLTTWNSLINCLALHGCSESAIAVFNSMRNEGVQP 563
Query: 310 NRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKT 369
+ VTF+ +LNAC+HGG V+EGL +F+ M +E + P+I+HYGC++D+L RAGR + A
Sbjct: 564 DEVTFVGLLNACTHGGFVDEGLRYFELMCDEHGIEPEIEHYGCVVDLLCRAGRFQDAMNF 623
Query: 370 ALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGR 429
+ + D V+W +LL AC H ++E+ E R +L++ V++ N+ + G
Sbjct: 624 INDMKVQ-PDEVIWGSLLNACRIHRHLELAEHAIRNLLDLNPSNANYVVMLANLYSEGGF 682
Query: 430 FGDAERLRRVMDER-NAFKVPGCSLV 454
+ + ++R++M E K+PGCS +
Sbjct: 683 WEEVRKVRKLMKEDVTGKKLPGCSWI 708
>gi|15234044|ref|NP_193619.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75098703|sp|O49399.2|PP321_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g18840
gi|5738365|emb|CAA16741.2| putative protein [Arabidopsis thaliana]
gi|7268678|emb|CAB78886.1| putative protein [Arabidopsis thaliana]
gi|332658697|gb|AEE84097.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 545
Score = 247 bits (631), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 137/448 (30%), Positives = 239/448 (53%), Gaps = 54/448 (12%)
Query: 35 NTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLF-DSFTYSFLIRTCATLSHPNLG 93
N+++ Y+ + +P+ A +++++ L P+F D ++++F+++ CA G
Sbjct: 109 NSVIRAYANSSTPEVALTVFREML---------LGPVFPDKYSFTFVLKACAAFCGFEEG 159
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
Q+H + K G + V+V LVN+Y G+ + + K+ D MP R+ V+WN +++ ++
Sbjct: 160 RQIHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEK 219
Query: 154 GELEFARSLFEE-------------------------------MPCRNVVSWTGIIDGYT 182
G ++ AR+LF+E MP R+VVSW ++ Y
Sbjct: 220 GLVDEARALFDEMEERNVESWNFMISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYA 279
Query: 183 RMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFD 242
+ NE L +F KM+ +P T+++VL A G + + +H Y +K G +
Sbjct: 280 HVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIE-IE 338
Query: 243 IRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRM 302
+ L+D Y+KCG I A ++F S ++++ +W SIIS ++HG+GK+A+E F M
Sbjct: 339 GFLATALVDMYSKCGKIDKALEVFRATS--KRDVSTWNSIISDLSVHGLGKDALEIFSEM 396
Query: 303 QKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGR 362
G KPN +TF+ VL+AC+H G++++ F+ M V P I+HYGC++D+LGR G+
Sbjct: 397 VYEGFKPNGITFIGVLSACNHVGMLDQARKLFEMMSSVYRVEPTIEHYGCMVDLLGRMGK 456
Query: 363 LEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYN 422
+E+AE+ IP++ +++ +LLGAC G +E ER+ ++LE+ Y M N
Sbjct: 457 IEEAEELVNEIPADEASILL-ESLLGACKRFGQLEQAERIANRLLELNLRDSSGYAQMSN 515
Query: 423 ILAGVGRFGD---------AERLRRVMD 441
+ A GR+ AER+ R +D
Sbjct: 516 LYASDGRWEKVIDGRRNMRAERVNRSLD 543
>gi|195651797|gb|ACG45366.1| pentatricopeptide repeat protein PPR868-14 [Zea mays]
Length = 544
Score = 247 bits (630), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 150/423 (35%), Positives = 234/423 (55%), Gaps = 24/423 (5%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+N LL Y++A A L+ ++ +TH T++ LIR A
Sbjct: 125 YNALLAGYAVAGDMDGALALFGGMRS-WTH-----------VTWATLIRGFAEKGDMAEA 172
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
+ + G ++ V T LV YV G ++ + ++FD MP RN W+ M+TG K
Sbjct: 173 RRWFEA-TPPGMRT-VVTWTVLVQGYVCAGDMETAREVFDRMPARNAFVWSSMVTGYFKA 230
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
G+ E AR++F+ +P RN+V+W +I GY ++ S +AL F M+ E +P E T+ ++
Sbjct: 231 GDAEEARAVFDRIPTRNLVNWNALIAGYAQIGCSEQALEAFHLMLQ-ERVKPDEFTMASL 289
Query: 214 LPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVER 273
L A Q G ++ + +H + + V+N LID YAKCG + A +F+ S+
Sbjct: 290 LSACAQLGSLEQGKKVHDFINQEHIRKNHF-VMNGLIDMYAKCGDLAHARYIFD--SMRW 346
Query: 274 KNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNF 333
KN W ++IS A HG EA+ F +M++ G KPN +T L+VL AC+HGG V+EGL
Sbjct: 347 KNNECWNTMISALASHGQSDEALHLFFQMERSGRKPNTITVLAVLGACTHGGFVDEGLQI 406
Query: 334 FDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFH 393
F+K+ + V ++HYGCL+D+LGRAG+L++A + + SE + V+W +LLGAC H
Sbjct: 407 FNKL-DAYGVGAGVEHYGCLVDLLGRAGKLKEAYEIVNNM-SEEPNEVIWGSLLGACRVH 464
Query: 394 GNVEMGERVTRKILEMERGYG----GDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVP 449
+ EM VT +IL + + +Y+++ NI+A R+ AE++RR M R K P
Sbjct: 465 RDAEMSRLVTEEILRLHSFHASSNDAEYIMLANIMAASERWEQAEQMRRKMARRGVEKTP 524
Query: 450 GCS 452
GCS
Sbjct: 525 GCS 527
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 110/406 (27%), Positives = 187/406 (46%), Gaps = 37/406 (9%)
Query: 12 NITTQIHSHLLTTNSLLHHSQLFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPL 71
N +H+ +T++S H + L+ Y+ ++A L+Y + TH H PL P+
Sbjct: 3 NRARPLHAIYMTSSS--HDPDKWAHLVKEYASQSLLREAALVYARNLPRRTH-HQPLLPV 59
Query: 72 FDSFTYSFLIRTCATLSHPN---LGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDS 128
+ A S P LG LHA K F + V T +V+MY G L D+
Sbjct: 60 ---------LLKAAAASSPTELGLGKSLHAEALKSAFARDLLVGTTIVSMYCKCGALADA 110
Query: 129 SKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSN 188
+ FDEMP+RN++++N ++ G G+++ A +LF M V+W +I G+
Sbjct: 111 RRAFDEMPDRNVISYNALLAGYAVAGDMDGALALFGGMRSWTHVTWATLIRGFAEKGDMA 170
Query: 189 EALALFRKMVACEYTEPSEITILA---VLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRV 245
EA F E T P T++ ++ GD+++ + + R AF V
Sbjct: 171 EARRWF------EATPPGMRTVVTWTVLVQGYVCAGDMETAREVFDRMPAR--NAF---V 219
Query: 246 LNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKV 305
+ ++ Y K G A +F+ I +NLV+W ++I+G+A G ++A+E F M +
Sbjct: 220 WSSMVTGYFKAGDAEEARAVFDRIPT--RNLVNWNALIAGYAQIGCSEQALEAFHLMLQE 277
Query: 306 GLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQ 365
+KP+ T S+L+AC+ G +E+G D + +E + + LIDM + G L
Sbjct: 278 RVKPDEFTMASLLSACAQLGSLEQGKKVHDFINQE-HIRKNHFVMNGLIDMYAKCGDLAH 336
Query: 366 AEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMER 411
A + + + W T++ A + HG + +MER
Sbjct: 337 ARYIFDSMRWKNNE--CWNTMISALASHGQ---SDEALHLFFQMER 377
>gi|297744641|emb|CBI37903.3| unnamed protein product [Vitis vinifera]
Length = 516
Score = 247 bits (630), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 131/364 (35%), Positives = 208/364 (57%), Gaps = 12/364 (3%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+NT++ ++ +A Y + +Q+ + F+++ ++ C L L
Sbjct: 160 WNTMVIAHAQCGYWDEALRFYSEFRQLGIQC--------NGFSFAGVLTVCVKLKEVGLT 211
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
Q+H I GF S+V +++++++ YV G + D+ KLFDEM R+++ W M++G KW
Sbjct: 212 RQVHGQILVAGFLSNVVLSSSVLDAYVKCGLMGDARKLFDEMSARDVLAWTTMVSGYAKW 271
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
G+++ A LF EMP +N VSWT +I GY R ++AL LF KM+ + P + T +
Sbjct: 272 GDMKSANELFVEMPEKNPVSWTALISGYARNGMGHKALELFTKMMLF-HVRPDQFTFSSC 330
Query: 214 LPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVER 273
L A +K + IH Y + F I V++ LID Y+KCG + K+F D+ +
Sbjct: 331 LCACASIASLKHGKQIHAYLLRINFQPNTI-VVSALIDMYSKCGSLGIGRKVF-DLMGNK 388
Query: 274 KNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNF 333
++V W +IIS A HG G+EA++ M + G KP+++TF+ +LNACSH GLV++GLNF
Sbjct: 389 LDVVLWNTIISALAQHGCGEEAIQMLDDMVRSGAKPDKITFVVILNACSHSGLVQQGLNF 448
Query: 334 FDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFH 393
F+ M + ++P +HY CLID+LGRAG E+ +P + D VW LLG C H
Sbjct: 449 FESMSCDYGIVPSQEHYACLIDLLGRAGCFEEVMDQLEKMPYKPDD-RVWNALLGVCRIH 507
Query: 394 GNVE 397
G++E
Sbjct: 508 GHIE 511
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 110/395 (27%), Positives = 186/395 (47%), Gaps = 46/395 (11%)
Query: 72 FDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSH-VYVNTALVNMYVSLGFLKDSSK 130
DS T + L++ CA G ++H + G + +++ L+NMY G ++ K
Sbjct: 57 LDSRTLASLLQHCADSRALREGKRVHLHLKLTGLKRPGTFLSNHLINMYAKCGKEVEARK 116
Query: 131 LFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEA 190
+FD+M RNL +WN M++G K G ++ AR LF++MP ++VVSW ++ + + +EA
Sbjct: 117 VFDKMSARNLYSWNNMLSGYAKLGMIKPARKLFDKMPEKDVVSWNTMVIAHAQCGYWDEA 176
Query: 191 LAL---FRKM-VACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVL 246
L FR++ + C + + VL + +V + +HG GF + ++ +
Sbjct: 177 LRFYSEFRQLGIQC-----NGFSFAGVLTVCVKLKEVGLTRQVHGQILVAGFLS-NVVLS 230
Query: 247 NCLIDTYAKCGCIFSASKLFEDISVE-----------------------------RKNLV 277
+ ++D Y KCG + A KLF+++S KN V
Sbjct: 231 SSVLDAYVKCGLMGDARKLFDEMSARDVLAWTTMVSGYAKWGDMKSANELFVEMPEKNPV 290
Query: 278 SWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKM 337
SWT++ISG+A +GMG +A+E F +M ++P++ TF S L AC+ ++ G +
Sbjct: 291 SWTALISGYARNGMGHKALELFTKMMLFHVRPDQFTFSSCLCACASIASLKHGKQIHAYL 350
Query: 338 VEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVE 397
+ P+ LIDM + G L K + DVV+W T++ A + HG
Sbjct: 351 L-RINFQPNTIVVSALIDMYSKCGSLGIGRKV-FDLMGNKLDVVLWNTIISALAQHG--- 405
Query: 398 MGERVTRKILEMER-GYGGDYVLMYNILAGVGRFG 431
GE + + +M R G D + IL G
Sbjct: 406 CGEEAIQMLDDMVRSGAKPDKITFVVILNACSHSG 440
>gi|356545004|ref|XP_003540936.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59200, chloroplastic-like [Glycine max]
Length = 629
Score = 247 bits (630), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 158/473 (33%), Positives = 243/473 (51%), Gaps = 30/473 (6%)
Query: 5 QNSQTPNNITTQIHSHLLTTNSLLHHSQLFNTLLHFYSLAESPQKAFLLYKQLQQ----I 60
+N + P ++ + IH H + T + F LL Y A L++ Q +
Sbjct: 35 KNRKNPKHVQS-IHCHAIKTRTSQDPFVAFE-LLRVYCKVNYIDHAIKLFRCTQNPNVYL 92
Query: 61 YTH---------SHSPLPPLF----------DSFTYSFLIRTCATLSHPNLGTQLHAVIS 101
YT S++ LF D++ + +++ C G ++H ++
Sbjct: 93 YTSLIDGFVSFGSYTDAINLFCQMVRKHVLADNYAVTAMLKACVLQRALGSGKEVHGLVL 152
Query: 102 KVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARS 161
K G + LV +Y G L+D+ K+FD MPER++V VMI G +E A
Sbjct: 153 KSGLGLDRSIALKLVELYGKCGVLEDARKMFDGMPERDVVACTVMIGSCFDCGMVEEAIE 212
Query: 162 LFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNG 221
+F EM R+ V WT +IDG R N L +FR+M + EP+E+T + VL A Q G
Sbjct: 213 VFNEMGTRDTVCWTMVIDGLVRNGEFNRGLEVFREM-QVKGVEPNEVTFVCVLSACAQLG 271
Query: 222 DVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTS 281
++ + IH Y K G V LI+ Y++CG I A LF+ + V K++ ++ S
Sbjct: 272 ALELGRWIHAYMRKCGVEVNRF-VAGALINMYSRCGDIDEAQALFDGVRV--KDVSTYNS 328
Query: 282 IISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEEC 341
+I G A+HG EAVE F M K ++PN +TF+ VLNACSHGGLV+ G F+ M
Sbjct: 329 MIGGLALHGKSIEAVELFSEMLKERVRPNGITFVGVLNACSHGGLVDLGGEIFESMEMIH 388
Query: 342 EVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGER 401
+ P+++HYGC++D+LGR GRLE+A + E D ++ +LL AC H N+ MGE+
Sbjct: 389 GIEPEVEHYGCMVDILGRVGRLEEAFDFIGRMGVEADDKMLC-SLLSACKIHKNIGMGEK 447
Query: 402 VTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
V + + E R G ++++ N A +GR+ A +R M++ K PGCS +
Sbjct: 448 VAKLLSEHYRIDSGSFIMLSNFYASLGRWSYAAEVREKMEKGGIIKEPGCSSI 500
>gi|357119334|ref|XP_003561397.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g62890-like [Brachypodium distachyon]
Length = 635
Score = 247 bits (630), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 131/364 (35%), Positives = 214/364 (58%), Gaps = 6/364 (1%)
Query: 92 LGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPE-RNLVTWNVMITGL 150
LG+ +HA+ K G +YV AL + Y G + +FDE+P R++VTWN ++ G
Sbjct: 148 LGSHVHALAVKAGAAGDLYVRNALTHFYGVCGDVGAMRTVFDELPRVRDVVTWNAVLAGY 207
Query: 151 VKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITI 210
V+ G + AR +FEEMP R+ VSW+ ++ GY + + AL +FR MV + +E +
Sbjct: 208 VRAGMVRAAREVFEEMPVRDEVSWSTLVGGYVKEGELDVALGVFRDMVE-KGVRVNEAAV 266
Query: 211 LAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDIS 270
+ L A Q G ++ + +H ++ G + V L+D ++KCGC+ A ++F+
Sbjct: 267 VTALSAAAQMGLLEHGRFVHEVVQRTGMPV-SVNVGAALVDMFSKCGCVAVAREVFD--G 323
Query: 271 VERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEG 330
+ R+++ +W ++I G A HG+G++AVE F R GL P +TF+ VLNACS GLV EG
Sbjct: 324 MPRRDVFAWNAMICGLASHGLGQDAVELFWRFLDEGLWPTDITFVGVLNACSRCGLVAEG 383
Query: 331 LNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGAC 390
+F MV++ + P+++HYGC++D+LGRAG + +A + G+ D V+W T+L AC
Sbjct: 384 RRYFKLMVDKYRIEPEMEHYGCMVDLLGRAGLVSEAIELIEGM-HIAPDPVLWGTVLSAC 442
Query: 391 SFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPG 450
H V++G V K++E+E + G YVL+ +I A ++ + +R++M R K G
Sbjct: 443 KTHNLVDLGITVGNKLIELEPAHDGHYVLLASIYAKAKKWDEVREVRKLMSSRGTGKSAG 502
Query: 451 CSLV 454
SL+
Sbjct: 503 WSLM 506
>gi|345505226|gb|AEN99837.1| chlororespiratory reduction 4, partial [Lobularia maritima]
Length = 570
Score = 247 bits (630), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 137/343 (39%), Positives = 203/343 (59%), Gaps = 5/343 (1%)
Query: 113 TALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVV 172
+L++ YV G ++D+ LFD MP R++VTW MI G K G + A+SLF+ MP R+VV
Sbjct: 220 NSLIDGYVKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHKAKSLFDVMPHRDVV 279
Query: 173 SWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGY 232
++ ++ GY + EAL +F M + P E T++ VL AI Q G + IH Y
Sbjct: 280 AYNSMMGGYVQNKYHMEALEVFYDMEKESHLSPDETTLVIVLSAIAQLGRLSKAVDIHLY 339
Query: 233 GEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMG 292
++ F D ++ LID Y+KCG I A +FE I E K++ W ++I G A+HG+G
Sbjct: 340 IVEKRFL-LDGKLGVALIDMYSKCGSIQQAMAVFEGI--ENKSIDHWNAMIGGLAVHGLG 396
Query: 293 KEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGC 352
+ A + ++K +KP+ +TF+ VLNACSH GLV+EGL F+ M + ++ P ++HYGC
Sbjct: 397 EAAFDMLMEIEKRFIKPDYITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGC 456
Query: 353 LIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERG 412
++D+L R+G +E A+ +P E D V+WRT L ACS H E E V + L ++ G
Sbjct: 457 MVDLLARSGSIELAKHLISEMPIEPND-VIWRTFLNACSHHKEFETRELVVAENLILQAG 515
Query: 413 YG-GDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
Y YVL+ N+ A + D R+R +M ER KVPGCS +
Sbjct: 516 YNPSSYVLLSNMYASFEMWEDVRRVRTMMKERKIEKVPGCSWI 558
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 108/404 (26%), Positives = 203/404 (50%), Gaps = 31/404 (7%)
Query: 33 LFNTLLHFYSLAESPQKA-FLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPN 91
L+N ++ +S P++A FLL ++ ++ P+ D F+ S + + C+ L
Sbjct: 52 LWNAVIKSHSHGVDPRQALFLLCSMIE-----NNVPV----DKFSLSLVTKACSRLGFAK 102
Query: 92 LGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLV 151
G Q+H ++K S +++ L+ +Y+ L + ++FD MP+R+ V++N MI G V
Sbjct: 103 EGMQIHGFLTKTVICSDLFLQNCLIGLYIKCSCLGYARQVFDRMPQRDSVSYNSMIDGYV 162
Query: 152 KWGELEFARSLFEEMP--CRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEIT 209
K G +E AR LF+ MP +N++SW +I GY + + + + K+ A E E I+
Sbjct: 163 KCGLIESARELFDLMPKEKKNLISWNSMIGGYA---QREDGVDIASKLFA-EMPEKDLIS 218
Query: 210 ILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDI 269
+++ ++G ++ + + +R D+ +ID YAK G + A LF+
Sbjct: 219 WNSLIDGYVKHGRIEDAKGLFDVMPRR-----DVVTWATMIDGYAKLGFVHKAKSLFD-- 271
Query: 270 SVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVG-LKPNRVTFLSVLNACSHGGLVE 328
+ +++V++ S++ G+ + EA+E F M+K L P+ T + VL+A + G +
Sbjct: 272 VMPHRDVVAYNSMMGGYVQNKYHMEALEVFYDMEKESHLSPDETTLVIVLSAIAQLGRLS 331
Query: 329 EGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLG 388
+ ++ +VE+ L D K LIDM + G ++QA GI ++ D W ++G
Sbjct: 332 KAVDIHLYIVEK-RFLLDGKLGVALIDMYSKCGSIQQAMAVFEGIENKSID--HWNAMIG 388
Query: 389 ACSFHGNVEMGERVTRKILEMERGY-GGDYVLMYNILAGVGRFG 431
+ HG +GE ++E+E+ + DY+ +L G
Sbjct: 389 GLAVHG---LGEAAFDMLMEIEKRFIKPDYITFVGVLNACSHSG 429
>gi|15234006|ref|NP_193610.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206861|sp|Q9SN39.1|PP320_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g18750, chloroplastic; Flags: Precursor
gi|4539394|emb|CAB37460.1| putative protein [Arabidopsis thaliana]
gi|7268669|emb|CAB78877.1| putative protein [Arabidopsis thaliana]
gi|332658686|gb|AEE84086.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 871
Score = 247 bits (630), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 142/424 (33%), Positives = 226/424 (53%), Gaps = 20/424 (4%)
Query: 35 NTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLGT 94
NTLL YS A +++++ +Y+ +I A
Sbjct: 335 NTLLDMYSKCGDLDSAKAVFREMSDRSV------------VSYTSMIAGYAREGLAGEAV 382
Query: 95 QLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNL----VTWNVMITGL 150
+L + + G VY TA++N L + ++ + + E +L N ++
Sbjct: 383 KLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMY 442
Query: 151 VKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITI 210
K G ++ A +F EM ++++SW II GY++ +NEAL+LF ++ + P E T+
Sbjct: 443 AKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTV 502
Query: 211 LAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDIS 270
VLPA + IHGY + G+ + D V N L+D YAKCG + A LF+DI+
Sbjct: 503 ACVLPACASLSAFDKGREIHGYIMRNGYFS-DRHVANSLVDMYAKCGALLLAHMLFDDIA 561
Query: 271 VERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEG 330
K+LVSWT +I+G+ MHG GKEA+ F +M++ G++ + ++F+S+L ACSH GLV+EG
Sbjct: 562 --SKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEG 619
Query: 331 LNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGAC 390
FF+ M EC++ P ++HY C++DML R G L +A + +P D +W LL C
Sbjct: 620 WRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIP-PDATIWGALLCGC 678
Query: 391 SFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPG 450
H +V++ E+V K+ E+E G YVLM NI A ++ +RLR+ + +R K PG
Sbjct: 679 RIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPG 738
Query: 451 CSLV 454
CS +
Sbjct: 739 CSWI 742
Score = 130 bits (328), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 99/363 (27%), Positives = 174/363 (47%), Gaps = 56/363 (15%)
Query: 73 DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLF 132
DS+T+S + ++ ++L + G QLH I K GF V +LV Y+
Sbjct: 194 DSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYL------------ 241
Query: 133 DEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALA 192
K ++ AR +F+EM R+V+SW II+GY + + L+
Sbjct: 242 -------------------KNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLS 282
Query: 193 LFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDT 252
+F +M+ E TI++V + + + +H G K F+ D R N L+D
Sbjct: 283 VFVQMLV-SGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSRED-RFCNTLLDM 340
Query: 253 YAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRV 312
Y+KCG + SA +F ++S +++VS+TS+I+G+A G+ EAV+ F M++ G+ P+
Sbjct: 341 YSKCGDLDSAKAVFREMS--DRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVY 398
Query: 313 TFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALG 372
T +VLN C+ L++EG + ++E ++ DI L+DM + G +++AE +
Sbjct: 399 TVTAVLNCCARYRLLDEGKRVHE-WIKENDLGFDIFVSNALMDMYAKCGSMQEAE--LVF 455
Query: 373 IPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGD 432
+ D++ W T++G S + Y + + ++N+L RF
Sbjct: 456 SEMRVKDIISWNTIIGGYS------------------KNCYANEALSLFNLLLEEKRFSP 497
Query: 433 AER 435
ER
Sbjct: 498 DER 500
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 88/374 (23%), Positives = 162/374 (43%), Gaps = 55/374 (14%)
Query: 73 DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLF 132
D T +++ CA G ++ I GF + + L MY + G LK++S++F
Sbjct: 93 DPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVF 152
Query: 133 DEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALA 192
DE+ + WN+++ L K G+ + ++
Sbjct: 153 DEVKIEKALFWNILMNELAKSGDF-------------------------------SGSIG 181
Query: 193 LFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDT 252
LF+KM++ E T V + V + +HG+ K GF + V N L+
Sbjct: 182 LFKKMMS-SGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERN-SVGNSLVAF 239
Query: 253 YAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRV 312
Y K + SA K+F++++ ++++SW SII+G+ +G+ ++ + F +M G++ +
Sbjct: 240 YLKNQRVDSARKVFDEMT--ERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLA 297
Query: 313 TFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALG 372
T +SV C+ L+ G V+ C D + L+DM + G L+ A+
Sbjct: 298 TIVSVFAGCADSRLISLGRAVHSIGVKACFSRED-RFCNTLLDMYSKCGDLDSAK----A 352
Query: 373 IPSEITD--VVVWRTLLGACSFHGNVEMGERVTRKILE--MERGYGGDYVLMYNILAGVG 428
+ E++D VV + +++ + G GE V K+ E E G D + +L
Sbjct: 353 VFREMSDRSVVSYTSMIAGYAREGLA--GEAV--KLFEEMEEEGISPDVYTVTAVLNCCA 408
Query: 429 RFGDAERLRRVMDE 442
R+ R++DE
Sbjct: 409 RY-------RLLDE 415
>gi|449439555|ref|XP_004137551.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Cucumis sativus]
Length = 776
Score = 247 bits (630), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 136/353 (38%), Positives = 200/353 (56%), Gaps = 28/353 (7%)
Query: 113 TALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVV 172
A++ YV ++ + +LFD+MP RN +WN M+TG + G ++ A+ LF+EMP R+ +
Sbjct: 312 NAMIAGYVQSQQIEKARELFDQMPSRNTSSWNTMVTGYAQCGNIDQAKILFDEMPQRDCI 371
Query: 173 SWTGIIDGYTRMNRSNEALALFRKM-----------VACEYTEPSEITILAVLPAIWQNG 221
SW +I GY + +S EAL LF KM +AC + +EI L +
Sbjct: 372 SWAAMISGYAQSGQSEEALHLFIKMKRDGGILNRSALACALSSCAEIAALEL-------- 423
Query: 222 DVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTS 281
+ +HG K GF I N L+ Y KCG I A +FEDI+ K++VSW +
Sbjct: 424 ----GKQLHGRLVKAGFQTGYI-AGNALLAMYGKCGSIEEAFDVFEDIT--EKDIVSWNT 476
Query: 282 IISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEEC 341
+I+G+A HG GKEA+ F M K+ +KP+ VT + VL+ACSH G V++G+ +F+ M +
Sbjct: 477 MIAGYARHGFGKEALALFESM-KMTIKPDDVTLVGVLSACSHTGFVDKGMEYFNSMYQNY 535
Query: 342 EVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGER 401
+ + KHY C+ID+LGRAGRL++A +P D W LLGA HG+ E+GE+
Sbjct: 536 GITANAKHYTCMIDLLGRAGRLDEALNLMKSMPF-YPDAATWGALLGASRIHGDTELGEK 594
Query: 402 VTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
K+ EME G YVL+ N+ A GR+ + +R M ++ KVPG S V
Sbjct: 595 AAEKVFEMEPDNSGMYVLLSNLYAASGRWREVREMRSKMRDKGVKKVPGYSWV 647
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 83/282 (29%), Positives = 148/282 (52%), Gaps = 19/282 (6%)
Query: 115 LVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSW 174
L+ YV L D+ LFD MP R+ ++WN+MITG + G L AR LFEE+P R+V +W
Sbjct: 221 LMGGYVRKKRLDDARSLFDRMPVRDKISWNIMITGYAQNGLLSEARRLFEELPIRDVFAW 280
Query: 175 TGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGE 234
T ++ G+ + +EA +F +M E +E++ A++ Q+ ++ + +
Sbjct: 281 TAMVSGFVQNGMLDEATRIFEEM-----PEKNEVSWNAMIAGYVQSQQIEKARELFDQMP 335
Query: 235 KRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKE 294
R +++ N ++ YA+CG I A LF+++ +++ +SW ++ISG+A G +E
Sbjct: 336 SRNTSSW-----NTMVTGYAQCGNIDQAKILFDEMP--QRDCISWAAMISGYAQSGQSEE 388
Query: 295 AVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLI 354
A+ F +M++ G NR L++C+ +E G ++V+ I L+
Sbjct: 389 ALHLFIKMKRDGGILNRSALACALSSCAEIAALELGKQLHGRLVKAGFQTGYIAG-NALL 447
Query: 355 DMLGRAGRLEQAEKTALGIPSEIT--DVVVWRTLLGACSFHG 394
M G+ G +E+ A + +IT D+V W T++ + HG
Sbjct: 448 AMYGKCGSIEE----AFDVFEDITEKDIVSWNTMIAGYARHG 485
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/313 (25%), Positives = 151/313 (48%), Gaps = 48/313 (15%)
Query: 113 TALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVV 172
A+++ Y+S + K+F++MP+R+L++WNVM++G VK G L AR+LF +MP ++VV
Sbjct: 95 NAMISGYLSNNKFDCARKVFEKMPDRDLISWNVMLSGYVKNGNLSAARALFNQMPEKDVV 154
Query: 173 SWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQ----- 227
SW ++ G+ + EA +F +M+ +EI+ +L A QNG ++ +
Sbjct: 155 SWNAMLSGFAQNGFVEEARKIFDQMLV-----KNEISWNGLLSAYVQNGRIEDARRLFDS 209
Query: 228 -----------LIHGYGEKRGFTAFDIRVL------------NCLIDTYAKCGCIFSASK 264
L+ GY K+ D R L N +I YA+ G + A +
Sbjct: 210 KMDWEIVSWNCLMGGYVRKKRLD--DARSLFDRMPVRDKISWNIMITGYAQNGLLSEARR 267
Query: 265 LFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHG 324
LFE++ + +++ +WT+++SGF +GM EA F M + N V++ +++
Sbjct: 268 LFEELPI--RDVFAWTAMVSGFVQNGMLDEATRIFEEMP----EKNEVSWNAMIAGYVQS 321
Query: 325 GLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWR 384
+E+ FD+M + + ++ + G ++QA+ +P D + W
Sbjct: 322 QQIEKARELFDQMPSR-----NTSSWNTMVTGYAQCGNIDQAKILFDEMPQR--DCISWA 374
Query: 385 TLLGACSFHGNVE 397
++ + G E
Sbjct: 375 AMISGYAQSGQSE 387
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 148/313 (47%), Gaps = 48/313 (15%)
Query: 116 VNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWT 175
++ Y+ G + + +F+ M R+ VT+N MI+G + + + AR +FE+MP R+++SW
Sbjct: 67 ISAYMRKGQCESALSVFNGMRRRSTVTYNAMISGYLSNNKFDCARKVFEKMPDRDLISWN 126
Query: 176 GIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQ-------- 227
++ GY + + A ALF +M E ++ A+L QNG V+ +
Sbjct: 127 VMLSGYVKNGNLSAARALFNQM-----PEKDVVSWNAMLSGFAQNGFVEEARKIFDQMLV 181
Query: 228 --------LIHGYGE-------KRGFTA---FDIRVLNCLIDTYAKCGCIFSASKLFEDI 269
L+ Y + +R F + ++I NCL+ Y + + A LF+ +
Sbjct: 182 KNEISWNGLLSAYVQNGRIEDARRLFDSKMDWEIVSWNCLMGGYVRKKRLDDARSLFDRM 241
Query: 270 SVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTF--LSVLNACSHGGLV 327
V K +SW +I+G+A +G+ EA F + P R F ++++ G++
Sbjct: 242 PVRDK--ISWNIMITGYAQNGLLSEARRLFEEL------PIRDVFAWTAMVSGFVQNGML 293
Query: 328 EEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLL 387
+E F++M E+ EV + +I ++ ++E+A + +PS T W T++
Sbjct: 294 DEATRIFEEMPEKNEV-----SWNAMIAGYVQSQQIEKARELFDQMPSRNTS--SWNTMV 346
Query: 388 GACSFHGNVEMGE 400
+ GN++ +
Sbjct: 347 TGYAQCGNIDQAK 359
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 101/227 (44%), Gaps = 39/227 (17%)
Query: 81 IRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNL 140
+ +CA ++ LG QLH + K GFQ+ AL+ MY G ++++ +F+++ E+++
Sbjct: 412 LSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDITEKDI 471
Query: 141 VTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVAC 200
V+WN MI GY R EALALF M
Sbjct: 472 VSWNTMIA-------------------------------GYARHGFGKEALALFESMKMT 500
Query: 201 EYTEPSEITILAVLPAIWQNGDV-KSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCI 259
+P ++T++ VL A G V K + + + G TA + + C+ID + G +
Sbjct: 501 --IKPDDVTLVGVLSACSHTGFVDKGMEYFNSMYQNYGITA-NAKHYTCMIDLLGRAGRL 557
Query: 260 FSASKLFEDISVERKNLVSWTSIISGFAMHG---MGKEAVENFGRMQ 303
A L + + + +W +++ +HG +G++A E M+
Sbjct: 558 DEALNLMKSMPF-YPDAATWGALLGASRIHGDTELGEKAAEKVFEME 603
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 114/266 (42%), Gaps = 54/266 (20%)
Query: 137 ERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRK 196
+ ++V WN I+ ++ G+ E A S+F M R+ V++ +I GY N+ + A +F K
Sbjct: 57 DSDIVKWNRKISAYMRKGQCESALSVFNGMRRRSTVTYNAMISGYLSNNKFDCARKVFEK 116
Query: 197 MVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKC 256
M P D+ N ++ Y K
Sbjct: 117 M-------PDR----------------------------------DLISWNVMLSGYVKN 135
Query: 257 GCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLS 316
G + +A LF + K++VSW +++SGFA +G +EA + F +M L N +++
Sbjct: 136 GNLSAARALFNQMP--EKDVVSWNAMLSGFAQNGFVEEARKIFDQM----LVKNEISWNG 189
Query: 317 VLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSE 376
+L+A G +E+ FD ++ +I + CL+ R RL+ A +P
Sbjct: 190 LLSAYVQNGRIEDARRLFDSKMD-----WEIVSWNCLMGGYVRKKRLDDARSLFDRMP-- 242
Query: 377 ITDVVVWRTLLGACSFHGNVEMGERV 402
+ D + W ++ + +G + R+
Sbjct: 243 VRDKISWNIMITGYAQNGLLSEARRL 268
>gi|357132191|ref|XP_003567715.1| PREDICTED: pentatricopeptide repeat-containing protein At5g19020,
mitochondrial-like [Brachypodium distachyon]
Length = 656
Score = 247 bits (630), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 127/373 (34%), Positives = 211/373 (56%), Gaps = 3/373 (0%)
Query: 82 RTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLV 141
+ CA + G QLH VI K GF +H++V L++ Y S L + F + ++
Sbjct: 285 KACARHAAVLEGQQLHTVILKDGFDTHLFVQATLIHFYGSCDLLDLAKMQFKLSDKSHIA 344
Query: 142 TWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACE 201
+WN + G+V+ + AR LF+ MP ++ +SW+ ++ GY + S+ AL LF M+
Sbjct: 345 SWNAFMAGIVRKNLMHEARQLFDNMPEKDTISWSTLLSGYVQSGHSDMALQLFCLMLGAG 404
Query: 202 YTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFS 261
+P+ IT+ + L A+ +G ++ + IH Y + D ++ LID YAKCG +
Sbjct: 405 -VKPNHITLASTLSAVANSGTLEQGRWIHDYIISKSIHLTD-NLIAGLIDMYAKCGSVAD 462
Query: 262 ASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNAC 321
A LF + + +L W ++I A+HG ++E F ++Q +KPN +T++ VLNAC
Sbjct: 463 AVLLFNHVKEKLSSLSPWNAMICSLAIHGHAHMSLELFSQLQSSNIKPNSITYIGVLNAC 522
Query: 322 SHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVV 381
H G+V EG + F+ M E + P IKHYGC++D+LGRAG LE+AE+ +P + +DVV
Sbjct: 523 CHAGMVTEGKHHFESMRREYGIPPTIKHYGCMVDLLGRAGYLEEAERLIKTMPVK-SDVV 581
Query: 382 VWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMD 441
+W ++L A HGNV +GE+ ++ +++ +G V + NI A GR+ + +R+ +
Sbjct: 582 IWGSILAAARSHGNVALGEKAAEELAKLDPNHGASKVALCNIYADAGRWNNVSVVRKELR 641
Query: 442 ERNAFKVPGCSLV 454
N ++ G S V
Sbjct: 642 YENLERLSGSSGV 654
Score = 131 bits (329), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 106/394 (26%), Positives = 178/394 (45%), Gaps = 39/394 (9%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
F T+L + A + A +++ + +PP + T + +I A P
Sbjct: 112 FTTVLTALARAGHAEDAMAVFRGMLA------QDVPP--NEVTLAGVITALARDWAPAPL 163
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
+H V + G V V T LV+ Y + + + +F+ MP++N VTWN M+ G VK
Sbjct: 164 GMVHGVSVQRGLDGFVIVATNLVHAYAAAAQVGFARAVFEWMPDKNTVTWNAMLNGYVKA 223
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
G ++ A +FE +P R+VVSW +IDGY R + +EAL + M+A T + ++
Sbjct: 224 GAIDMAAEMFERIPERDVVSWLVMIDGYIRADCISEALRTYVAMMAEVDTRGNVALLVDF 283
Query: 214 LPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFE--DIS- 270
A ++ V Q +H K GF + V LI Y C + A F+ D S
Sbjct: 284 QKACARHAAVLEGQQLHTVILKDGFDTH-LFVQATLIHFYGSCDLLDLAKMQFKLSDKSH 342
Query: 271 ----------VERKNL----------------VSWTSIISGFAMHGMGKEAVENFGRMQK 304
+ RKNL +SW++++SG+ G A++ F M
Sbjct: 343 IASWNAFMAGIVRKNLMHEARQLFDNMPEKDTISWSTLLSGYVQSGHSDMALQLFCLMLG 402
Query: 305 VGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLE 364
G+KPN +T S L+A ++ G +E+G D ++ + L D G LIDM + G +
Sbjct: 403 AGVKPNHITLASTLSAVANSGTLEQGRWIHDYIISKSIHLTDNLIAG-LIDMYAKCGSVA 461
Query: 365 QAEKTALGIPSEITDVVVWRTLLGACSFHGNVEM 398
A + +++ + W ++ + + HG+ M
Sbjct: 462 DAVLLFNHVKEKLSSLSPWNAMICSLAIHGHAHM 495
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 135/272 (49%), Gaps = 18/272 (6%)
Query: 79 FLIRTCATLSHPNLGTQLHAVISKVGF-QSHVYVNTALVNMYVSLGFLKDSS---KLFDE 134
FL+ + + + G QLHA+ +K G S+++V +L+ Y L + LFDE
Sbjct: 11 FLVASLKSGARLRHGEQLHALAAKSGLLVSNLFVRNSLLAFYSRLPSSHAPALAHHLFDE 70
Query: 135 MPE--RNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALA 192
+P R+ N ++ L + G L+ A+ + EMP R+ VS+T ++ R + +A+A
Sbjct: 71 IPLALRDAAAHNTLLAALARGGHLDHAKRMLAEMPQRDTVSFTTVLTALARAGHAEDAMA 130
Query: 193 LFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDT 252
+FR M+A + P+E+T+ V+ A+ ++ ++HG +RG F I N L+
Sbjct: 131 VFRGMLAQD-VPPNEVTLAGVITALARDWAPAPLGMVHGVSVQRGLDGFVIVATN-LVHA 188
Query: 253 YAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNR- 311
YA + A +FE + KN V+W ++++G+ G A E F R+ P R
Sbjct: 189 YAAAAQVGFARAVFE--WMPDKNTVTWNAMLNGYVKAGAIDMAAEMFERI------PERD 240
Query: 312 -VTFLSVLNACSHGGLVEEGLNFFDKMVEECE 342
V++L +++ + E L + M+ E +
Sbjct: 241 VVSWLVMIDGYIRADCISEALRTYVAMMAEVD 272
>gi|225434804|ref|XP_002280428.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic [Vitis vinifera]
Length = 658
Score = 247 bits (630), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 141/427 (33%), Positives = 244/427 (57%), Gaps = 48/427 (11%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTC-ATLSHPN 91
++N L +LA ++ LY+++ +I S D FTY+++++ C A+ + +
Sbjct: 146 VWNALFRALTLAGYGREVLDLYRRMNRIGVPS--------DRFTYTYVLKACVASEAFVS 197
Query: 92 L---GTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMIT 148
L G ++H I + GF+ HV++ T L++MY G + ++S++FD+M
Sbjct: 198 LLLNGREIHGHILRHGFEGHVHIMTTLLDMYARFGCVLNASRVFDQM------------- 244
Query: 149 GLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKM-VACEYTEPSE 207
P +NVVSW+ +I Y++ + EAL LFRKM + + P+
Sbjct: 245 ------------------PVKNVVSWSAMIACYSKNGKPLEALELFRKMMLENQDLLPNS 286
Query: 208 ITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFE 267
+T+++VL A ++ +L+HGY +RG + + V++ L+ YA+CG + ++FE
Sbjct: 287 VTMVSVLQACAALAALEQGKLMHGYILRRGLDSI-LPVVSALVTVYARCGNLELGHRVFE 345
Query: 268 DISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLV 327
+E++++VSW S+IS + +HG G++A++ F M GL P+ ++F+SVL ACSH GLV
Sbjct: 346 --RMEKRDVVSWNSLISSYGIHGFGRKAIQIFKEMIDQGLSPSPISFVSVLGACSHAGLV 403
Query: 328 EEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLL 387
EEG F+ MV ++ P ++HY C++D+LGRA RL++A K + E VW +LL
Sbjct: 404 EEGKVLFESMVRGHKIFPSVEHYACMVDLLGRANRLDEAAKIIDDMRIE-PGPKVWGSLL 462
Query: 388 GACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFK 447
G+C H NVE+ ER T ++ E+E G+YVL+ +I A + + +R++ +++ R K
Sbjct: 463 GSCRIHCNVELAERATSRLFELEPTNAGNYVLLADIYAEAKMWNEVKRVKMLLEARGLQK 522
Query: 448 VPGCSLV 454
VPG S +
Sbjct: 523 VPGRSCI 529
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 103/391 (26%), Positives = 170/391 (43%), Gaps = 65/391 (16%)
Query: 58 QQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVN 117
Q + S P P TY LI +C + G LH + G ++ T L+N
Sbjct: 65 QALQVLSQEPNP---TQHTYELLILSCTRQNSLPQGIDLHRHLIHDGSDQDPFLATKLIN 121
Query: 118 MYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGI 177
MY L + ++ K+FD+ +R + WN + L G + R +
Sbjct: 122 MYSELDSIDNARKVFDKTRKRTIYVWNALFRALTLAG---YGRE---------------V 163
Query: 178 IDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRG 237
+D Y RMNR F + SE + +L NG + IHG+ + G
Sbjct: 164 LDLYRRMNRIGVPSDRFTYTYVLKACVASEAFVSLLL-----NG-----REIHGHILRHG 213
Query: 238 FTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVE 297
F + ++ L+D YA+ GC+ +AS++F+ + V KN+VSW+++I+ ++ +G EA+E
Sbjct: 214 FEGH-VHIMTTLLDMYARFGCVLNASRVFDQMPV--KNVVSWSAMIACYSKNGKPLEALE 270
Query: 298 NFGRM--QKVGLKPNRVTFLSVLNACS-----------HGGLVEEGLNFFDKMVEECEVL 344
F +M + L PN VT +SVL AC+ HG ++ GL+ +L
Sbjct: 271 LFRKMMLENQDLLPNSVTMVSVLQACAALAALEQGKLMHGYILRRGLD---------SIL 321
Query: 345 PDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTR 404
P + L+ + R G LE + + E DVV W +L+ + HG G + +
Sbjct: 322 PVV---SALVTVYARCGNLELGHRVFERM--EKRDVVSWNSLISSYGIHG---FGRKAIQ 373
Query: 405 KILEM-ERGYGGDYVLMYNILAGVGRFGDAE 434
EM ++G + ++L G E
Sbjct: 374 IFKEMIDQGLSPSPISFVSVLGACSHAGLVE 404
>gi|347954528|gb|AEP33764.1| organelle transcript processing 82, partial [Iberis amara]
Length = 666
Score = 247 bits (630), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 143/422 (33%), Positives = 232/422 (54%), Gaps = 44/422 (10%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+N ++ Y+ + ++A L+K + + D T ++ CA LG
Sbjct: 191 WNAMISGYAETGNYKEALELFKDMMKTNVRP--------DESTMVTVVSACAQSGSIELG 242
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
Q+H+ I GF S++ + AL+++Y K
Sbjct: 243 RQVHSWIDDHGFGSNLKIVNALIDLYS-------------------------------KC 271
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
GELE A LFE +P ++V+SW +I GYT MN EAL LF++M+ T P+++T+L++
Sbjct: 272 GELETACGLFEGLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGET-PNDVTMLSI 330
Query: 214 LPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVL-NCLIDTYAKCGCIFSASKLFEDISVE 272
LPA G + + IH Y +KR + L LID YAKCG I +A ++F S+
Sbjct: 331 LPACAHLGAIDIGRWIHVYIDKRLKGVANASSLRTSLIDMYAKCGDIEAAHQVFN--SIL 388
Query: 273 RKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLN 332
K+L SW ++I GFAMHG + + F RM+K G++P+ +TF+ +L+ACSH G+++ G +
Sbjct: 389 HKSLSSWNAMIFGFAMHGRADASFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRH 448
Query: 333 FFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSF 392
F M ++ ++ P ++HYGC+ID+LG +G ++AE+ + E D V+W +LL AC
Sbjct: 449 IFRSMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINTMEME-PDGVIWCSLLKACKM 507
Query: 393 HGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCS 452
HGNVE+GE + ++++E G YVL+ NI A GR+ + R +++++ KVPGCS
Sbjct: 508 HGNVELGESFAQNLIKIEPENPGSYVLLSNIYATAGRWNEVANTRALLNDKGMKKVPGCS 567
Query: 453 LV 454
+
Sbjct: 568 SI 569
Score = 201 bits (511), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 139/463 (30%), Positives = 233/463 (50%), Gaps = 59/463 (12%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNL 92
++NT+ ++L+ P A LY + S LP +S+T+ FL+++CA
Sbjct: 58 IWNTMFRGHALSSDPVSALKLY-----VCMISLGLLP---NSYTFPFLLKSCAKSKAFKE 109
Query: 93 GTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVK 152
G Q+H + K+G +YV+T+L++MYV G L+D+ K+FDE P R++V++ +I G
Sbjct: 110 GQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDESPHRDVVSYTALIKGYAS 169
Query: 153 WGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILA 212
G +E A+ +F+E+P ++VVSW +I GY EAL LF+ M+ P E T++
Sbjct: 170 RGYIENAQKMFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTN-VRPDESTMVT 228
Query: 213 VLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVE 272
V+ A Q+G ++ + +H + + GF + +++++N LID Y+KCG + +A LFE +
Sbjct: 229 VVSACAQSGSIELGRQVHSWIDDHGFGS-NLKIVNALIDLYSKCGELETACGLFEGLPY- 286
Query: 273 RKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGL- 331
K+++SW ++I G+ + KEA+ F M + G PN VT LS+L AC+H G ++ G
Sbjct: 287 -KDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRW 345
Query: 332 --NFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEK--------------------- 368
+ DK ++ ++ LIDM + G +E A +
Sbjct: 346 IHVYIDKRLKGVANASSLR--TSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFA 403
Query: 369 ------TALGIPSEI------TDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYG-- 414
+ I S + D + + LL ACS G +++G + R M + Y
Sbjct: 404 MHGRADASFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRHIFRS---MTQDYKMT 460
Query: 415 ---GDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
Y M ++L G F +AE + M E V CSL+
Sbjct: 461 PKLEHYGCMIDLLGHSGLFKEAEEMINTM-EMEPDGVIWCSLL 502
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 124/279 (44%), Gaps = 44/279 (15%)
Query: 156 LEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLP 215
L +A S+FE + N++ W + G+ + AL L+ M++ P+ T +L
Sbjct: 41 LPYAISVFETIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLL-PNSYTFPFLLK 99
Query: 216 AIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKN 275
+ ++ K Q IHG+ K G D+ V LI Y + G + A K+F++ ++
Sbjct: 100 SCAKSKAFKEGQQIHGHVLKLG-CDLDLYVHTSLISMYVQNGRLEDAHKVFDE--SPHRD 156
Query: 276 LVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFD 335
+VS+T++I G+A G +EN +M + V++ ++++ + G +E L F
Sbjct: 157 VVSYTALIKGYASRGY----IENAQKMFDEIPVKDVVSWNAMISGYAETGNYKEALELFK 212
Query: 336 KMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGN 395
M++ V PD E T + T++ AC+ G+
Sbjct: 213 DMMK-TNVRPD--------------------ESTMV-------------TVVSACAQSGS 238
Query: 396 VEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAE 434
+E+G +V I + G+G + ++ ++ + G+ E
Sbjct: 239 IELGRQVHSWI--DDHGFGSNLKIVNALIDLYSKCGELE 275
>gi|115477124|ref|NP_001062158.1| Os08g0500600 [Oryza sativa Japonica Group]
gi|42407356|dbj|BAD08817.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|42407750|dbj|BAD08896.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113624127|dbj|BAF24072.1| Os08g0500600 [Oryza sativa Japonica Group]
Length = 429
Score = 247 bits (630), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 137/374 (36%), Positives = 217/374 (58%), Gaps = 8/374 (2%)
Query: 70 PLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSS 129
P + ++S ++ A ++ ++ + +G +V ++V + G L +
Sbjct: 51 PRRNGVSWSTMVGGYAAAGELDVAREMFDRMPAIG--RNVVTWNSMVTGFARHGLLPLAR 108
Query: 130 KLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNE 189
K+FDEMP RNLV+WN M+ G +++ AR LF+ MP ++VVSWT +I GY + R +
Sbjct: 109 KMFDEMPVRNLVSWNAMLRGYSVNSDMDGARELFDVMPEKDVVSWTCMISGYAQAGRYQD 168
Query: 190 ALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNC- 248
L LFR M +P+E+T+++VL A ++ + +H + +K + L
Sbjct: 169 TLELFRAMQTESNVQPNEVTMVSVLSACANLTALEEGRWVHAFIDKHKMVLNNEYNLGAA 228
Query: 249 LIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLK 308
LID YAKCG A K+F S++RKN+ +W ++I+ AM+G +++V+ F +M++ G K
Sbjct: 229 LIDMYAKCGRTDIAVKIFN--SLDRKNVSAWNALITRLAMNGNARDSVDAFEQMKRTGEK 286
Query: 309 PNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEK 368
PN +TF+ VL ACSHGGLV+EG F M C V P++KHYGC++DMLGRAG LE+AE+
Sbjct: 287 PNDITFVGVLTACSHGGLVDEGRRCFQSMASTCGVQPEVKHYGCMVDMLGRAGLLEEAEE 346
Query: 369 TALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKI--LEMERGYGGDYVLMYNILAG 426
+P DV+V+ LLGAC H ++ ERV +I L + G +VL+ +I A
Sbjct: 347 LIRSMPMA-PDVMVFGALLGACRMHKRFDVAERVQSEIHSLNLNAQQSGCHVLISDIYAA 405
Query: 427 VGRFGDAERLRRVM 440
G++ D R+V+
Sbjct: 406 AGKWFDVLEARQVV 419
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 86/273 (31%), Positives = 138/273 (50%), Gaps = 40/273 (14%)
Query: 139 NLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMV 198
++V+WN +I G VK GE+E A+ +F+EMP RN VSW+ ++ GY + A +F +M
Sbjct: 23 DVVSWNTVIGGYVKCGEMESAKRVFDEMPRRNGVSWSTMVGGYAAAGELDVAREMFDRM- 81
Query: 199 ACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGE-------KRGFTAFDIRVL---NC 248
PAI +N V ++ G+ ++ F +R L N
Sbjct: 82 ----------------PAIGRN-VVTWNSMVTGFARHGLLPLARKMFDEMPVRNLVSWNA 124
Query: 249 LIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQ-KVGL 307
++ Y+ + A +LF D+ E K++VSWT +ISG+A G ++ +E F MQ + +
Sbjct: 125 MLRGYSVNSDMDGARELF-DVMPE-KDVVSWTCMISGYAQAGRYQDTLELFRAMQTESNV 182
Query: 308 KPNRVTFLSVLNACSHGGLVEEGL---NFFDKMVEECEVLPDIKHYG-CLIDMLGRAGRL 363
+PN VT +SVL+AC++ +EEG F DK VL + + G LIDM + GR
Sbjct: 183 QPNEVTMVSVLSACANLTALEEGRWVHAFIDK---HKMVLNNEYNLGAALIDMYAKCGRT 239
Query: 364 EQAEKTALGIPSEITDVVVWRTLLGACSFHGNV 396
+ A K + + +V W L+ + +GN
Sbjct: 240 DIAVKIFNSLDRK--NVSAWNALITRLAMNGNA 270
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/238 (19%), Positives = 92/238 (38%), Gaps = 41/238 (17%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+ ++ Y+ A Q L++ +Q + S + P + T ++ CA L+ G
Sbjct: 153 WTCMISGYAQAGRYQDTLELFRAMQ-----TESNVQP--NEVTMVSVLSACANLTALEEG 205
Query: 94 TQLHAVISK--VGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLV 151
+HA I K + + + AL++MY G + K+F+ + +N+ WN +IT L
Sbjct: 206 RWVHAFIDKHKMVLNNEYNLGAALIDMYAKCGRTDIAVKIFNSLDRKNVSAWNALITRLA 265
Query: 152 KWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITIL 211
G + +D + +M R+ E +P++IT +
Sbjct: 266 MNGNARDS------------------VDAFEQMKRTGE--------------KPNDITFV 293
Query: 212 AVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDI 269
VL A G V + +++ C++D + G + A +L +
Sbjct: 294 GVLTACSHGGLVDEGRRCFQSMASTCGVQPEVKHYGCMVDMLGRAGLLEEAEELIRSM 351
>gi|297824523|ref|XP_002880144.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297325983|gb|EFH56403.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 555
Score = 247 bits (630), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 152/487 (31%), Positives = 257/487 (52%), Gaps = 76/487 (15%)
Query: 31 SQLFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHP 90
S L N+++ Y +F Y+ L++ + L P D+FT++ + ++C
Sbjct: 42 SFLCNSMIKAYLETRHYNDSFAFYRDLRK-----ETCLAP--DNFTFTTMTKSCTLSMCV 94
Query: 91 NLGTQLHAVISKVGFQSHVYVNTALVNM-------------------------------Y 119
G QLH+ I + GF + +YV+T +V+M Y
Sbjct: 95 YQGLQLHSQIWRSGFCADMYVSTGVVDMYAKFGKMGCARNVFDEMPQRSEVSWTALICGY 154
Query: 120 VSLGFLKDSSKLFDEMPE-RNLVTWNVMITGLVKWGELEFARSLFEEM------------ 166
V G L +SKLFD+MP+ +++V +N M+ G VK G++ AR LF+EM
Sbjct: 155 VRFGELDLASKLFDQMPQVKDVVIYNAMMDGFVKSGDMTSARRLFDEMTHKTVITWTTMI 214
Query: 167 -------------------PCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSE 207
P RN+VSW +I GY + + EA+ LF++M A +P +
Sbjct: 215 HGYCNSNDIDSARKLFDAMPERNLVSWNTMIGGYCQNKQPQEAIRLFQEMQATTSLDPDD 274
Query: 208 ITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFE 267
+TIL+VLPAI G + + H + +++ ++V ++D Y+KCG I A ++F+
Sbjct: 275 VTILSVLPAISDTGALSLGEWCHCFVQRKNLDK-KVKVCTAILDMYSKCGEIEKAKRIFD 333
Query: 268 DISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLV 327
++ K + SW ++I G+A++G A++ F M K KP+ +T L+V++AC+HGGLV
Sbjct: 334 EMP--EKQVASWNAMIHGYALNGNAHAALDLFLTMAKEE-KPDEITMLAVISACNHGGLV 390
Query: 328 EEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLL 387
EEG +F +M+ + + I+HYGC++D+LGRAG L+QAE +P + +++ + L
Sbjct: 391 EEGRKWF-QMMRKFGLNAKIEHYGCMVDLLGRAGNLKQAEHLITNMPFKPNGIIL-SSFL 448
Query: 388 GACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFK 447
AC + ++E ER+ +K +E+E G+YVL+ N+ A R+ D ++ +M + A K
Sbjct: 449 SACGQYKDIERAERILKKAVELEPQNDGNYVLLRNLYAADKRWDDFGMVKNMMRKNEAKK 508
Query: 448 VPGCSLV 454
GCSL+
Sbjct: 509 EVGCSLI 515
>gi|449446363|ref|XP_004140941.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g34160-like [Cucumis sativus]
Length = 576
Score = 247 bits (630), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 137/421 (32%), Positives = 231/421 (54%), Gaps = 42/421 (9%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+N ++ +L+ P A Y+ + + S D+ T SF ++ CA +
Sbjct: 69 WNAVIRGTALSSDPANAVFWYRAM------AASNGLHRIDALTCSFALKACARALARSEA 122
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
QLH+ + + GF + V + T L++ Y +G L + KLFDEMP+ ++ +WN +I
Sbjct: 123 IQLHSQLLRFGFNADVLLQTTLLDAYAKIGDLDLAQKLFDEMPQPDIASWNALIA----- 177
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
G+ + +R +A+ F++M P+ +T+
Sbjct: 178 --------------------------GFAQGSRPADAIMTFKRMKVDGNLRPNAVTVQGA 211
Query: 214 LPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVER 273
L A Q G +K + +H Y + + +++V N +ID YAKCG + A +FE++ +
Sbjct: 212 LLACSQLGALKEGESVHKYIVEEKLNS-NVQVCNVVIDMYAKCGSMDKAYWVFENMRCD- 269
Query: 274 KNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNF 333
K+L++W ++I FAMHG G +A++ F ++ + G+ P+ V++L+VL AC+H GLVE+GL
Sbjct: 270 KSLITWNTMIMAFAMHGDGHKALDLFEKLGRSGMSPDAVSYLAVLCACNHAGLVEDGLKL 329
Query: 334 FDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFH 393
F+ M + + P+IKHYG ++D+LGRAGRL++A +P ++V+W+TLLGAC +
Sbjct: 330 FNSMTQR-GLEPNIKHYGSMVDLLGRAGRLKEAYDIVSSLP--FPNMVLWQTLLGACRTY 386
Query: 394 GNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSL 453
G+VEM E +RK++EM GD+VL+ N+ A R+ D R+R M R+ K PG S
Sbjct: 387 GDVEMAELASRKLVEMGFISCGDFVLLSNVYAARQRWDDVGRVRDAMRRRDVKKTPGFSY 446
Query: 454 V 454
+
Sbjct: 447 I 447
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 122/251 (48%), Gaps = 7/251 (2%)
Query: 147 ITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACE-YTEP 205
+ + +G+L +A +F +P + W +I G + A+ +R M A
Sbjct: 42 LCAISSFGDLSYALHIFRYIPYPSTNDWNAVIRGTALSSDPANAVFWYRAMAASNGLHRI 101
Query: 206 SEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKL 265
+T L A + +H + GF A D+ + L+D YAK G + A KL
Sbjct: 102 DALTCSFALKACARALARSEAIQLHSQLLRFGFNA-DVLLQTTLLDAYAKIGDLDLAQKL 160
Query: 266 FEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVG-LKPNRVTFLSVLNACSHG 324
F+++ + ++ SW ++I+GFA +A+ F RM+ G L+PN VT L ACS
Sbjct: 161 FDEMP--QPDIASWNALIAGFAQGSRPADAIMTFKRMKVDGNLRPNAVTVQGALLACSQL 218
Query: 325 GLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWR 384
G ++EG + +VEE ++ +++ +IDM + G +++A + + + ++ W
Sbjct: 219 GALKEGESVHKYIVEE-KLNSNVQVCNVVIDMYAKCGSMDKAYWVFENMRCDKS-LITWN 276
Query: 385 TLLGACSFHGN 395
T++ A + HG+
Sbjct: 277 TMIMAFAMHGD 287
>gi|119638439|gb|ABL85030.1| hypothetical protein 57h21.3 [Brachypodium sylvaticum]
Length = 618
Score = 247 bits (630), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 131/342 (38%), Positives = 208/342 (60%), Gaps = 5/342 (1%)
Query: 113 TALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVV 172
A+++ Y + ++ LF +MP R++ +WN+MITG ++ +LE A+ LF++MP RNV+
Sbjct: 226 NAMISGYARNHRIDEAHDLFMKMPTRDIASWNIMITGFIQDRDLERAQDLFDKMPRRNVI 285
Query: 173 SWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGY 232
+WT +++GY + +S AL +F M+ E P+++T L + A + Q +H
Sbjct: 286 TWTTMMNGYLQSMQSETALQIFNGML-VEGIRPNQVTFLGAVDACSNLAGLSEGQQVHQM 344
Query: 233 GEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMG 292
K F FD + + L++ YAKCG I A K+F D+S E K+++SW +I+ +A HG+G
Sbjct: 345 ICKTSFQ-FDTFIESTLMNLYAKCGEIRLARKVF-DLSKE-KDVISWNGMIAAYAHHGVG 401
Query: 293 KEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGC 352
EA+ + +MQ+ G KPN VT++ +L+ACSH GLV+EGL F+ MV++ + +HY C
Sbjct: 402 VEAIHLYEKMQEKGYKPNDVTYVGLLSACSHSGLVDEGLRIFEYMVKDRSIAVRDEHYTC 461
Query: 353 LIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERG 412
LID+ RAGRL A++ + E + VW LLG C+ HGN +G+ R +LE E
Sbjct: 462 LIDLCSRAGRLGDAKRLIHFLKVEPSS-TVWNALLGGCNSHGNESIGDLAARNLLEAEPN 520
Query: 413 YGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
G Y L+ NI A G++ +A ++R M++R K PGCS +
Sbjct: 521 NAGTYTLLCNIYASAGKWKEAAKIRSEMNDRGLKKQPGCSWI 562
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 82/300 (27%), Positives = 153/300 (51%), Gaps = 16/300 (5%)
Query: 95 QLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWG 154
+ A+ ++ ++ V NT ++ Y S G ++D+ LFD MP R+ +WN+++ LV+ G
Sbjct: 116 EAEALFQRMPERNVVSWNT-MLEAYTSAGRVRDAWTLFDGMPVRDAGSWNILLAALVRSG 174
Query: 155 ELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVL 214
++ AR LF+ MP RNV++WT ++ G R +EA ALF M E + ++ A++
Sbjct: 175 NMDKARKLFDRMPERNVMAWTTMVAGIARSGSVDEARALFDGM-----PERNVVSWNAMI 229
Query: 215 PAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERK 274
+N + + R DI N +I + + + A LF+ + R+
Sbjct: 230 SGYARNHRIDEAHDLFMKMPTR-----DIASWNIMITGFIQDRDLERAQDLFD--KMPRR 282
Query: 275 NLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFF 334
N+++WT++++G+ + A++ F M G++PN+VTFL ++ACS+ + EG
Sbjct: 283 NVITWTTMMNGYLQSMQSETALQIFNGMLVEGIRPNQVTFLGAVDACSNLAGLSEGQQVH 342
Query: 335 DKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHG 394
+M+ + D L+++ + G + A K + E DV+ W ++ A + HG
Sbjct: 343 -QMICKTSFQFDTFIESTLMNLYAKCGEIRLARKV-FDLSKE-KDVISWNGMIAAYAHHG 399
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 135/288 (46%), Gaps = 24/288 (8%)
Query: 101 SKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFAR 160
+ V HV V + G + D+ +LFD P+R++V+W ++ + G L AR
Sbjct: 27 AAVDVSGHVQDPNRRVAELAAAGRVSDARRLFDRTPDRDVVSWTALVAAYARQGMLHDAR 86
Query: 161 SLFEEMPC-RNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQ 219
+LF+ RNVV+WT ++ GY R R +EA ALF++M E + ++ +L A
Sbjct: 87 ALFDRPDARRNVVTWTALLSGYARAGRVDEAEALFQRM-----PERNVVSWNTMLEAYTS 141
Query: 220 NGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSW 279
G V+ + G D N L+ + G + A KLF+ + +N+++W
Sbjct: 142 AGRVRDAWTLFD-----GMPVRDAGSWNILLAALVRSGNMDKARKLFD--RMPERNVMAW 194
Query: 280 TSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVE 339
T++++G A G EA F M + N V++ ++++ + ++E + F KM
Sbjct: 195 TTMVAGIARSGSVDEARALFDGMP----ERNVVSWNAMISGYARNHRIDEAHDLFMKMPT 250
Query: 340 ECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLL 387
DI + +I + LE+A+ +P +V+ W T++
Sbjct: 251 R-----DIASWNIMITGFIQDRDLERAQDLFDKMPRR--NVITWTTMM 291
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/266 (22%), Positives = 112/266 (42%), Gaps = 36/266 (13%)
Query: 73 DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLF 132
+ T+ + C+ L+ + G Q+H +I K FQ ++ + L+N+Y G ++ + K+F
Sbjct: 318 NQVTFLGAVDACSNLAGLSEGQQVHQMICKTSFQFDTFIESTLMNLYAKCGEIRLARKVF 377
Query: 133 DEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALA 192
D E+++++WN G+I Y EA+
Sbjct: 378 DLSKEKDVISWN-------------------------------GMIAAYAHHGVGVEAIH 406
Query: 193 LFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDT 252
L+ KM Y +P+++T + +L A +G V I Y K A CLID
Sbjct: 407 LYEKMQEKGY-KPNDVTYVGLLSACSHSGLVDEGLRIFEYMVKDRSIAVRDEHYTCLIDL 465
Query: 253 YAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRV 312
++ G + A +L + VE + V W +++ G H G E++ + + +PN
Sbjct: 466 CSRAGRLGDAKRLIHFLKVEPSSTV-WNALLGGCNSH--GNESIGDLAARNLLEAEPNNA 522
Query: 313 -TFLSVLNACSHGGLVEEGLNFFDKM 337
T+ + N + G +E +M
Sbjct: 523 GTYTLLCNIYASAGKWKEAAKIRSEM 548
>gi|224066034|ref|XP_002302000.1| predicted protein [Populus trichocarpa]
gi|222843726|gb|EEE81273.1| predicted protein [Populus trichocarpa]
Length = 797
Score = 246 bits (629), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 131/392 (33%), Positives = 220/392 (56%), Gaps = 19/392 (4%)
Query: 72 FDSFTYSFLIRTCATLSHPNLGTQLHA----VISKVGFQSHVYVNTALVNMYVSLGFLKD 127
D FT++ +I CA LG ++HA ++ + VN AL+ Y G +
Sbjct: 287 LDEFTFTSVISVCANAGCFRLGKEMHAYFLKTVANPAPDVAMPVNNALITFYWKCGKVDI 346
Query: 128 SSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRS 187
+ ++F++MPER+LV+WN++++G V ++ A+S F EMP +N++SW +I G ++ +
Sbjct: 347 AQEIFNKMPERDLVSWNIILSGYVNVRCMDEAKSFFNEMPEKNILSWIIMISGLAQIGFA 406
Query: 188 NEALALFRKMV-----ACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFD 242
EAL F +M C+Y I +VL G +K + +H + G+ +
Sbjct: 407 EEALKFFNRMKLQGFEPCDYAFAGAIISCSVL------GSLKHGRQLHAQVVRYGYES-S 459
Query: 243 IRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRM 302
+ N LI YA+CG + +A LF I++ + +SW ++I+ HG G +A+E F M
Sbjct: 460 LSAGNALITMYARCGVVDAAHCLF--INMPCVDAISWNAMIAALGQHGQGTQAIELFEEM 517
Query: 303 QKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGR 362
K G+ P+R++FL+V++ACSH GLV+EG +FD M V PD +HY +ID+L RAG+
Sbjct: 518 LKEGILPDRISFLTVISACSHAGLVKEGRKYFDSMHNVYGVNPDEEHYARIIDLLCRAGK 577
Query: 363 LEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYN 422
+A++ +P E +W LL C HGN+++G ++ E++ + G YVL+ N
Sbjct: 578 FSEAKEVMESMPFE-PGAPIWEALLAGCRIHGNIDLGIEAAERLFELKPQHDGTYVLLSN 636
Query: 423 ILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
+ A G++ D ++R++M +R K PGCS +
Sbjct: 637 MYAVAGQWNDMAKVRKLMRDRGVKKEPGCSWI 668
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 113/462 (24%), Positives = 191/462 (41%), Gaps = 68/462 (14%)
Query: 28 LHHSQLFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATL 87
+ S +N ++ YS A L+ +Q+ + P D++T++ ++ A +
Sbjct: 109 MRDSVFYNAMITAYSHNHDGHAAIELFCDMQR---DNFRP-----DNYTFTSVLGALALV 160
Query: 88 SHPNLG-TQLHAVISKVGFQSHVYVNTALVNMYVS---------LGFLKDSSKLFDEMPE 137
+ QLH + K G V AL++ YV + ++ KLFDEMP
Sbjct: 161 AEKEKHCQQLHCAVVKSGTGFVTSVLNALISSYVKCAASPSAQSSSLMAEARKLFDEMPN 220
Query: 138 RNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKM 197
R+ ++W +ITG VK +L+ A+ + V+W +I GY EA +FRKM
Sbjct: 221 RDELSWTTIITGYVKNNDLDAAKEFLNGTSKKLGVAWNAMISGYAHRGLYLEAFEMFRKM 280
Query: 198 VACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKR-GFTAFDIR--VLNCLIDTYA 254
+ + + E T +V+ G + + +H Y K A D+ V N LI Y
Sbjct: 281 IMSK-IQLDEFTFTSVISVCANAGCFRLGKEMHAYFLKTVANPAPDVAMPVNNALITFYW 339
Query: 255 KCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTF 314
KCG + A ++F + ++LVSW I+SG+ EA F M + N +++
Sbjct: 340 KCGKVDIAQEIFNKMP--ERDLVSWNIILSGYVNVRCMDEAKSFFNEMP----EKNILSW 393
Query: 315 LSVLNACSHGGLVEEGLNFFDKM---------------VEECEVLPDIKH---------- 349
+ +++ + G EE L FF++M + C VL +KH
Sbjct: 394 IIMISGLAQIGFAEEALKFFNRMKLQGFEPCDYAFAGAIISCSVLGSLKHGRQLHAQVVR 453
Query: 350 YG---------CLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGE 400
YG LI M R G ++ A + +P D + W ++ A HG G
Sbjct: 454 YGYESSLSAGNALITMYARCGVVDAAHCLFINMPC--VDAISWNAMIAALGQHGQ---GT 508
Query: 401 RVTRKILEM-ERGYGGDYVLMYNILAGVGRFGDAERLRRVMD 441
+ EM + G D + +++ G + R+ D
Sbjct: 509 QAIELFEEMLKEGILPDRISFLTVISACSHAGLVKEGRKYFD 550
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 103/401 (25%), Positives = 174/401 (43%), Gaps = 59/401 (14%)
Query: 77 YSFLIRTCATLSHP---NLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFD 133
Y L++ C L P +L +HA + GFQ ++ L+++Y L + LFD
Sbjct: 14 YGSLLQICC-LQSPISYSLARPVHAHMIASGFQPRGHILNRLIDIYSKSSKLNYARYLFD 72
Query: 134 EMPERNLVTWNVMITGLVKWGELEFARSLFEEMPC--RNVVSWTGIIDGYTRMNRSNEAL 191
E+P+ ++V +I G+L+ +R +F + P R+ V + +I Y+ + + A+
Sbjct: 73 EIPQPDIVARTTLIAAYSAAGDLKLSRKIFSDTPLGMRDSVFYNAMITAYSHNHDGHAAI 132
Query: 192 ALFRKMVACEYTEPSEITILAVLPAIWQNGDV-KSCQLIHGYGEKRGFTAFDIRVLNCLI 250
LF M + P T +VL A+ + K CQ +H K G T F VLN LI
Sbjct: 133 ELFCDMQRDNF-RPDNYTFTSVLGALALVAEKEKHCQQLHCAVVKSG-TGFVTSVLNALI 190
Query: 251 DTYAKC---------GCIFSASKLFEDI-----------------------------SVE 272
+Y KC + A KLF+++
Sbjct: 191 SSYVKCAASPSAQSSSLMAEARKLFDEMPNRDELSWTTIITGYVKNNDLDAAKEFLNGTS 250
Query: 273 RKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGG---LVEE 329
+K V+W ++ISG+A G+ EA E F +M ++ + TF SV++ C++ G L +E
Sbjct: 251 KKLGVAWNAMISGYAHRGLYLEAFEMFRKMIMSKIQLDEFTFTSVISVCANAGCFRLGKE 310
Query: 330 GLNFFDKMVEECEVLPDIKH--YGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLL 387
+F K V PD+ LI + G+++ A++ +P D+V W +L
Sbjct: 311 MHAYFLKTV--ANPAPDVAMPVNNALITFYWKCGKVDIAQEIFNKMPER--DLVSWNIIL 366
Query: 388 GACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVG 428
S + NV + EM +++M + LA +G
Sbjct: 367 ---SGYVNVRCMDEAKSFFNEMPEKNILSWIIMISGLAQIG 404
>gi|255556729|ref|XP_002519398.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541465|gb|EEF43015.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 615
Score = 246 bits (629), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 157/463 (33%), Positives = 237/463 (51%), Gaps = 63/463 (13%)
Query: 16 QIHSHLLTTNSLLHHSQLF--NTLLHFYSLA---ESPQKAF--------LLYKQLQQIYT 62
QIH+H + T S LF NTL+ FY+++ E+ +K F + + L Q Y+
Sbjct: 159 QIHAHSIKTGL---SSNLFVKNTLMRFYAVSGFIEAVEKVFDQGPHWDLISWTTLIQAYS 215
Query: 63 HSHSP---LPPLF------DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSH--VYV 111
P + F D T ++ C+ L LG ++ A + F H V++
Sbjct: 216 KMGYPSEAIAAFFRMNCTADRMTLVVVLSACSQLGDFTLGKKILAYMDHHLFDVHSDVFL 275
Query: 112 NTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNV 171
AL++MY+ K G+ AR LF MP +N+
Sbjct: 276 GNALLDMYL-------------------------------KCGQPHLARQLFHLMPVKNL 304
Query: 172 VSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHG 231
VSW +I G EAL +FR+M +P +T++ VL + GD++ + +H
Sbjct: 305 VSWNSMISGLAHQGLFKEALHMFRRMQTMGL-KPDSVTLVGVLNSCANLGDLELGKWVHS 363
Query: 232 YGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGM 291
Y +K A D V N L+D YAKCG I A +F+ +++ K++ S+T++I GFAMHG
Sbjct: 364 YIDKNHMKA-DGYVANALVDMYAKCGSIDQAFMVFQ--AMKCKDVYSYTAMIVGFAMHGK 420
Query: 292 GKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYG 351
A+ F M ++G++P+ VT + VL+ACSH GL+EEG F M + P +HYG
Sbjct: 421 ADRALAIFSEMPRMGVRPDHVTLVGVLSACSHAGLLEEGRRHFQDMSRLYHLQPQTEHYG 480
Query: 352 CLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMER 411
C++D+LGRAG + +AE +P + D VW +LLGAC H VE+GE V +K++EME
Sbjct: 481 CMVDLLGRAGLISEAEAFTNKMPI-VPDASVWGSLLGACKIHAKVELGETVIQKLIEMEP 539
Query: 412 GYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
G Y+LM NI + R+ DA + R+ M + N K PGCS +
Sbjct: 540 ERDGAYILMSNIYSSANRWRDALKWRKAMKQNNIKKTPGCSSI 582
>gi|357511423|ref|XP_003626000.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355501015|gb|AES82218.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 607
Score = 246 bits (629), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 152/401 (37%), Positives = 218/401 (54%), Gaps = 17/401 (4%)
Query: 52 LLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPN-LGTQLHAVISKVGFQSHVY 110
+L +Q+ + H L + F S LIR A L LG + + K V
Sbjct: 123 VLVRQVHALAFH----LGHYLNVFVGSSLIRAYAGLKEEEALGRAFNDISMK-----DVT 173
Query: 111 VNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRN 170
ALV+ Y+ LG D+ FD+MP+RN+++W ++ G VK ++ ARS+F++M RN
Sbjct: 174 SWNALVSSYMELGKFVDAQTAFDQMPQRNIISWTTLVNGYVKNKQVNKARSVFDDMSERN 233
Query: 171 VVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIH 230
VVSWT +I GY + R +AL LF M E T P+ T +VL A + + +H
Sbjct: 234 VVSWTAMISGYVQNKRFVDALKLFVLMFKTE-TRPNHFTFSSVLDACAGSSSLIMGLQLH 292
Query: 231 GYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHG 290
K G A D+ L L+D YAKCG + +A +FE S+ KNLVSW +II G+A HG
Sbjct: 293 PCIIKSGI-ANDVIWLTSLVDMYAKCGDMDAAFGVFE--SIRDKNLVSWNAIIGGYASHG 349
Query: 291 MGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHY 350
+ A+E F RM+ VG P+ VTF++VL+AC H GLVEEG F M+ + + +++HY
Sbjct: 350 LATRALEEFDRMKVVG-TPDEVTFVNVLSACVHAGLVEEGEKHFTDMLTKYGIQAEMEHY 408
Query: 351 GCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEME 410
C++D+ GRAGR ++AE +P E DVV+W LL AC H N+E+GE +I +E
Sbjct: 409 SCMVDLYGRAGRFDEAENLIKNMPFE-PDVVLWGALLAACGLHSNLELGEYAAERIRRLE 467
Query: 411 RGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFK-VPG 450
+ Y ++ I G + LR M ER K PG
Sbjct: 468 SSHPVSYSVLSKIQGEKGVWSSVNELRDTMKERGIKKQTPG 508
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 91/383 (23%), Positives = 157/383 (40%), Gaps = 71/383 (18%)
Query: 115 LVNMYVSLGFLKDSSKLFDE-MPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVS 173
++N Y+ +K + KL DE + N+V+WN+++T ++ ++ LF++MP ++ VS
Sbjct: 14 MINTYIDNNNVKQAHKLLDENLLSCNIVSWNMVMTAYLQHNQIGPVHDLFDKMPLKDAVS 73
Query: 174 WTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNG-DVKSCQ----- 227
W ++ G+ R S F +M P++ TI +L A+ DV Q
Sbjct: 74 WNIMLSGFQRTRNSEGLYRCFLQMGRAGVV-PNDYTISTLLRAVISTELDVLVRQVHALA 132
Query: 228 --------------LIHGY-GEK------RGFTAF---DIRVLNCLIDTYAKCGCIFSAS 263
LI Y G K R F D+ N L+ +Y + G A
Sbjct: 133 FHLGHYLNVFVGSSLIRAYAGLKEEEALGRAFNDISMKDVTSWNALVSSYMELGKFVDAQ 192
Query: 264 KLFEDI-----------------------------SVERKNLVSWTSIISGFAMHGMGKE 294
F+ + + +N+VSWT++ISG+ + +
Sbjct: 193 TAFDQMPQRNIISWTTLVNGYVKNKQVNKARSVFDDMSERNVVSWTAMISGYVQNKRFVD 252
Query: 295 AVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLI 354
A++ F M K +PN TF SVL+AC+ + GL +++ + D+ L+
Sbjct: 253 ALKLFVLMFKTETRPNHFTFSSVLDACAGSSSLIMGLQLHPCIIKS-GIANDVIWLTSLV 311
Query: 355 DMLGRAGRLEQAEKTALGIPSEITD--VVVWRTLLGACSFHGNVEMGERVTRKILEMERG 412
DM + G ++ A G+ I D +V W ++G + HG + R + M+
Sbjct: 312 DMYAKCGDMD----AAFGVFESIRDKNLVSWNAIIGGYASHG---LATRALEEFDRMKVV 364
Query: 413 YGGDYVLMYNILAGVGRFGDAER 435
D V N+L+ G E
Sbjct: 365 GTPDEVTFVNVLSACVHAGLVEE 387
>gi|296086392|emb|CBI31981.3| unnamed protein product [Vitis vinifera]
Length = 569
Score = 246 bits (629), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 154/453 (33%), Positives = 245/453 (54%), Gaps = 50/453 (11%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQL--QQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHP 90
+FNT+L YS++ P++AF+++K L QQ+ + D F++ ++ CA
Sbjct: 94 MFNTMLRGYSISHHPKQAFVVFKGLRAQQM----------ILDQFSFIPTLKACARELAY 143
Query: 91 NLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPER-NLVTWNVMITG 149
G +H V+ + G V AL++ Y G + D+ +LFDE+P + +LV+WN ++ G
Sbjct: 144 ETGQGIHGVVVRSGHGLFTNVKNALLHFYCVCGRIGDAHQLFDEIPPKIDLVSWNTLLGG 203
Query: 150 LVK----------WGEL---------------------EFARSLFEEMPCRNVVSWTGII 178
++ +GE+ + +F ++P ++VV W +I
Sbjct: 204 YLQVPHPTMVTCLFGEMCRKDLNVATALIDMYANAGFIDLGHKIFYQVPKKDVVLWNCLI 263
Query: 179 DGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGF 238
DGY + + E+L+L + M E +P+ T++ +L A G I Y E+
Sbjct: 264 DGYAKSDLLQESLSLLQLMKR-EQVKPNSSTLVGLLSACAAAGASSVGLCISNYVEEEQI 322
Query: 239 TAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVEN 298
A D + L+D Y KCG + A +FE + + K++ SWT++ISG+ +HG K A+
Sbjct: 323 -ALDAVLGTALVDMYCKCGFLEKAIDVFERMEI--KDVKSWTAMISGYGVHGQAKNAIMI 379
Query: 299 FGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLG 358
F RM+ G +PN VTFL+VLNACSHGG+V EG++F +KMV E P ++HYGC+ID+LG
Sbjct: 380 FHRMEVEGYRPNEVTFLAVLNACSHGGMVVEGISFLEKMVREYGFSPKVEHYGCMIDLLG 439
Query: 359 RAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYV 418
RAG LE+A +P E D WR LL AC +GNV++GE V R +LE+ + D +
Sbjct: 440 RAGLLEEAHNLIKSLPIE-GDATGWRALLAACRVYGNVDLGECVKRVLLEIFDEHPTDSI 498
Query: 419 LMYNILAGVGRFGDAERLRRVMDERNAFKVPGC 451
L+ + A GR D R++ + +E+ K GC
Sbjct: 499 LLSSTYAIAGRLPDYTRMQEIKEEK-MMKEAGC 530
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 99/206 (48%), Gaps = 12/206 (5%)
Query: 155 ELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVL 214
+ ++A S+F ++P N+ + ++ GY+ + +A +F+ + A + + + + L
Sbjct: 76 DTDYAASIFNQIPSPNLFMFNTMLRGYSISHHPKQAFVVFKGLRAQQMI-LDQFSFIPTL 134
Query: 215 PAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERK 274
A + ++ Q IHG + G F V N L+ Y CG I A +LF++I +
Sbjct: 135 KACARELAYETGQGIHGVVVRSGHGLF-TNVKNALLHFYCVCGRIGDAHQLFDEIP-PKI 192
Query: 275 NLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFF 334
+LVSW +++ G+ FG M + L N T ++++ ++ G ++ G F
Sbjct: 193 DLVSWNTLLGGYLQVPHPTMVTCLFGEMCRKDL--NVAT--ALIDMYANAGFIDLGHKIF 248
Query: 335 DKMVEECEVLPDIKHYGCLIDMLGRA 360
++ ++ D+ + CLID ++
Sbjct: 249 YQVPKK-----DVVLWNCLIDGYAKS 269
>gi|356542056|ref|XP_003539487.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g18970-like [Glycine max]
Length = 595
Score = 246 bits (629), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 150/438 (34%), Positives = 238/438 (54%), Gaps = 61/438 (13%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCA---TLSH 89
LFNTL+ P + L+++ + S FD +TY+F++ CA + S
Sbjct: 195 LFNTLIR----CVQPNDSILIFR-------NEFSRGLMFFDEYTYNFVLGACARSPSAST 243
Query: 90 PNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITG 149
+G QLHA+I K G +S++ V T V Y S +++++
Sbjct: 244 LWVGRQLHALIVKHGVESNIVVPTTKVYFYAS---------------NKDIIS------- 281
Query: 150 LVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNE-----ALALFRKM-VACEYT 203
+R +F+EMP R+ V+W +I GY+ + N+ AL LF M +
Sbjct: 282 ---------SRKVFDEMPRRSTVTWNAMITGYSSLKEGNKKYALNALYLFIDMLIDVSGI 332
Query: 204 EPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTA-FDIRVLNCLIDTYAKCGCIFSA 262
+P+ TI++VL A+ Q G +++ IHG+ EK T D+ + L+D Y+KCGC+ SA
Sbjct: 333 KPTATTIVSVLSAVSQIGMLETGACIHGFAEKTVCTPEDDVFIGTGLVDMYSKCGCLDSA 392
Query: 263 SKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACS 322
+F + +KN+++WT++ +G A+HG GK+++E +M G+KPN TF S L+AC
Sbjct: 393 LSVF--WRMNQKNIMTWTAMTTGLAIHGKGKQSLEVLYKMGAYGVKPNEATFTSFLSACC 450
Query: 323 HGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVV 382
HGGLVEEGL F +M V+P I+HYGC++D+LGRAG+LE+A + +P D V+
Sbjct: 451 HGGLVEEGLQLFLEMKRTFGVMPQIQHYGCIVDLLGRAGKLEEAYDFIMQMPIN-PDAVI 509
Query: 383 WRTLLGACSFHGNVEMGERVTRKILEMERGYGG------DYVLMYNILAGVGRFGDAERL 436
WR+LL AC+ HG+V MGE+V + +L++E DY+ + N+ A ++ D E +
Sbjct: 510 WRSLLAACNIHGDVVMGEKVGKFLLQLEEWSSAESPKSEDYIALSNVYALAEKWDDVETV 569
Query: 437 RRVMDERNAFKVPGCSLV 454
R M ++ G S V
Sbjct: 570 RIKMKAKSILNKAGSSAV 587
>gi|297729323|ref|NP_001177025.1| Os12g0577900 [Oryza sativa Japonica Group]
gi|255670427|dbj|BAH95753.1| Os12g0577900, partial [Oryza sativa Japonica Group]
Length = 614
Score = 246 bits (629), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 147/446 (32%), Positives = 225/446 (50%), Gaps = 65/446 (14%)
Query: 70 PLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSS 129
P DSFTYSFLI+ + + +H+ + K+G +V AL++ Y G D+
Sbjct: 125 PRRDSFTYSFLIKALSAAGVAPV-RAVHSHVVKLGSVEDTFVGNALIDAYSKNGGFSDAR 183
Query: 130 KLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPC--------------------- 168
K+FDEMPER++V+WN + +V+ GEL R LF+EMP
Sbjct: 184 KVFDEMPERDVVSWNTAMAAMVREGELAGVRKLFDEMPEKDTVSWNTILDGYTKAGEVEA 243
Query: 169 ----------RNVVSWTGIIDGYTRMNRSNEALALFRKM------------VACE----- 201
RNVVSW+ ++ GY + A +F KM AC
Sbjct: 244 AFELFQRMPERNVVSWSTMVSGYCKKGDLEMARVIFDKMPSKNLVTWTIMVSACAQKGLV 303
Query: 202 ------YTEPSEITI-------LAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNC 248
+ + E ++ +++L A ++G + + IH Y KR V N
Sbjct: 304 DEAGKLFAQMKEASVELDVAAVVSILAACAESGSLSLGKRIHRYVRKRNL-GRSTHVCNA 362
Query: 249 LIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLK 308
LID + KCGC+ A +F+ +V+ K+ VSW SII GFAMHG G +A+E F +M++ G
Sbjct: 363 LIDMFCKCGCVNRADYVFDTETVQ-KDSVSWNSIIGGFAMHGHGDKALELFAQMKQQGFN 421
Query: 309 PNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEK 368
P+ VT ++VL+AC+H G V+EG F M + ++P I+HYGC+ID+LGR G +++A
Sbjct: 422 PDAVTMINVLSACTHMGFVDEGRRHFSNMERDYGIMPQIEHYGCMIDLLGRGGLIKEAVD 481
Query: 369 TALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVG 428
+P E + V+W +LL AC H NVE E ++ +++ G+Y ++ NI A G
Sbjct: 482 LIKSMPWEPNE-VIWGSLLSACRLHKNVEYAEIAVNELSKLQPSNAGNYAVLSNIYAEAG 540
Query: 429 RFGDAERLRRVMDERNAFKVPGCSLV 454
++ D + R M + K G S V
Sbjct: 541 QWSDMAKARMQMKGTGSQKTAGSSWV 566
>gi|356565103|ref|XP_003550784.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g47530-like [Glycine max]
Length = 515
Score = 246 bits (629), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 141/425 (33%), Positives = 235/425 (55%), Gaps = 47/425 (11%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTC--ATLSHPN 91
+NT++ S+++SPQK LLY+ +++ + D + SF++++C +
Sbjct: 5 YNTMIRACSMSDSPQKGLLLYRDMRRRGIAA--------DPLSSSFVVKSCIRLXGLYLL 56
Query: 92 LGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLV 151
G Q+H I K G Q + TA++++Y D+ K+FDEM
Sbjct: 57 GGVQVHCNIFKYGHQWDTLLLTAVMDLYSXCQRGGDACKVFDEM---------------- 100
Query: 152 KWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYT-EPSEITI 210
P R+ V+W +I R NR+ +AL+LF + Y EP ++T
Sbjct: 101 ---------------PPRDTVAWNVMISCCIRNNRTRDALSLFDVLQNSSYKCEPDDVTC 145
Query: 211 LAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDIS 270
L +L A ++ + IHGY + G+ + + N LI Y++CGC+ A ++F+
Sbjct: 146 LLLLQACAHLYALEFGERIHGYMMEHGYGGA-LNLSNALISMYSRCGCLDKAXEVFKGTG 204
Query: 271 VERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEG 330
KN+VSW+++ISG AM+G G+EA+E+F M ++G++P+ T VL+ACS+ G+V+EG
Sbjct: 205 --NKNVVSWSAMISGLAMNGYGREAIESFEEMLRIGIRPDDQTLTGVLSACSYSGMVDEG 262
Query: 331 -LNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGA 389
++FFD+M E V P++ HYGC++D+LG AG L++A + + + E D WRTLLGA
Sbjct: 263 MMSFFDRMSREFGVTPNVHHYGCMVDLLGHAGLLDKAXQLIMSMV-EKPDSTTWRTLLGA 321
Query: 390 CSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVP 449
C HG+V +GERV ++E++ GD+VL+ NI + G + +R++M ++ P
Sbjct: 322 CRIHGHVTLGERVIGHLIELKAQEAGDHVLLLNIYSSAGHWEKVAEVRKLMKNKSIQTTP 381
Query: 450 GCSLV 454
GCS +
Sbjct: 382 GCSTI 386
>gi|326526103|dbj|BAJ93228.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 623
Score = 246 bits (629), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 132/342 (38%), Positives = 205/342 (59%), Gaps = 4/342 (1%)
Query: 113 TALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVV 172
A+++ Y + ++ LF MPER++ +WN+MITG ++ +L+ A+ LF+EMP RNVV
Sbjct: 230 NAMISGYARNLRIDEALDLFMNMPERDVASWNIMITGFIQNKDLKKAQELFDEMPKRNVV 289
Query: 173 SWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGY 232
SWT +++G + N S AL +F M+ + P+++T L + A + Q +H
Sbjct: 290 SWTTMMNGCLQGNESEMALQVFNGML-VDGIRPNQVTFLGAVDAGSNLAGLSEGQQVHQM 348
Query: 233 GEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMG 292
K F FD + + L+ YAKCG I A K+F D+S E K+++SW +I+ +A HG G
Sbjct: 349 ICKTPFQ-FDNFIESSLMKLYAKCGEIRLARKVF-DLSGE-KDVISWNGMIAAYAHHGAG 405
Query: 293 KEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGC 352
EA+ + +MQ+ KPN VT++ +L+ACSH GLV+EGL F+ M ++ + +HY C
Sbjct: 406 VEAIALYEKMQENRYKPNDVTYVGLLSACSHSGLVDEGLRIFEYMAKDKSIAVRDEHYSC 465
Query: 353 LIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERG 412
LID+ RAGRL+ A++ G+ + T VW LLG C+ HGN +G+ R +LE E
Sbjct: 466 LIDLCSRAGRLDDAKRLINGLKLKPTSSTVWSALLGGCNAHGNESIGDLAARNLLEAEPD 525
Query: 413 YGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
G Y L+ NI A G++ +A ++R M++R K PGCS +
Sbjct: 526 NAGTYTLLSNIYASAGKWKEAAKIRSEMNDRGLKKQPGCSWI 567
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 84/301 (27%), Positives = 154/301 (51%), Gaps = 18/301 (5%)
Query: 95 QLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWG 154
+ A+ ++ ++ V NT ++ Y S G + + LFD MP R+ +WN+++ LV+ G
Sbjct: 120 EARALFDRMPERNVVSWNT-MLEAYASAGRMGAACALFDGMPVRDAGSWNILLAALVRSG 178
Query: 155 ELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVL 214
++ AR LFE MP RNV+SWT +I G R ++EA ALF M E + ++ A++
Sbjct: 179 TMDEARRLFERMPERNVMSWTTMISGLARSGSADEARALFDGM-----PERNVVSWNAMI 233
Query: 215 PAIWQNGDV-KSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVER 273
+N + ++ L E+ D+ N +I + + + A +LF+++ +
Sbjct: 234 SGYARNLRIDEALDLFMNMPER------DVASWNIMITGFIQNKDLKKAQELFDEMP--K 285
Query: 274 KNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNF 333
+N+VSWT++++G + A++ F M G++PN+VTFL ++A S+ + EG
Sbjct: 286 RNVVSWTTMMNGCLQGNESEMALQVFNGMLVDGIRPNQVTFLGAVDAGSNLAGLSEGQQV 345
Query: 334 FDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFH 393
+M+ + D L+ + + G + A K + E DV+ W ++ A + H
Sbjct: 346 H-QMICKTPFQFDNFIESSLMKLYAKCGEIRLARKV-FDLSGE-KDVISWNGMIAAYAHH 402
Query: 394 G 394
G
Sbjct: 403 G 403
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 87/311 (27%), Positives = 144/311 (46%), Gaps = 25/311 (8%)
Query: 98 AVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELE 157
AV S F SHV + + G + D+ +LFD P+R++V+W M+ + G+L
Sbjct: 29 AVFSTDAF-SHVQDPNRRIAELAAAGRVPDARRLFDRTPDRDVVSWTAMVAAYARQGQLH 87
Query: 158 FARSLFEEMPC-RNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPA 216
A +L RNVV+WT ++ GY R R +EA ALF +M E S T+L +
Sbjct: 88 EASALLHRPDARRNVVTWTALLSGYARARRVDEARALFDRM--PERNVVSWNTMLEAYAS 145
Query: 217 IWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNL 276
+ G +C L G D N L+ + G + A +LFE + +N+
Sbjct: 146 AGRMG--AACALFD------GMPVRDAGSWNILLAALVRSGTMDEARRLFE--RMPERNV 195
Query: 277 VSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDK 336
+SWT++ISG A G EA F M + N V++ ++++ + ++E L+ F
Sbjct: 196 MSWTTMISGLARSGSADEARALFDGMP----ERNVVSWNAMISGYARNLRIDEALDLFMN 251
Query: 337 MVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNV 396
M E D+ + +I + L++A++ +P +VV W T++ C
Sbjct: 252 MPER-----DVASWNIMITGFIQNKDLKKAQELFDEMPKR--NVVSWTTMMNGCLQGNES 304
Query: 397 EMGERVTRKIL 407
EM +V +L
Sbjct: 305 EMALQVFNGML 315
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/246 (21%), Positives = 105/246 (42%), Gaps = 35/246 (14%)
Query: 93 GTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVK 152
G Q+H +I K FQ ++ ++L+ +Y G ++ + K+FD E+++++WN
Sbjct: 342 GQQVHQMICKTPFQFDNFIESSLMKLYAKCGEIRLARKVFDLSGEKDVISWN-------- 393
Query: 153 WGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILA 212
G+I Y EA+AL+ KM Y +P+++T +
Sbjct: 394 -----------------------GMIAAYAHHGAGVEAIALYEKMQENRY-KPNDVTYVG 429
Query: 213 VLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVE 272
+L A +G V I Y K A +CLID ++ G + A +L + ++
Sbjct: 430 LLSACSHSGLVDEGLRIFEYMAKDKSIAVRDEHYSCLIDLCSRAGRLDDAKRLINGLKLK 489
Query: 273 RKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRV-TFLSVLNACSHGGLVEEGL 331
+ W++++ G H G E++ + + +P+ T+ + N + G +E
Sbjct: 490 PTSSTVWSALLGGCNAH--GNESIGDLAARNLLEAEPDNAGTYTLLSNIYASAGKWKEAA 547
Query: 332 NFFDKM 337
+M
Sbjct: 548 KIRSEM 553
>gi|222617355|gb|EEE53487.1| hypothetical protein OsJ_36641 [Oryza sativa Japonica Group]
Length = 921
Score = 246 bits (628), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 147/446 (32%), Positives = 225/446 (50%), Gaps = 65/446 (14%)
Query: 70 PLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSS 129
P DSFTYSFLI+ + + +H+ + K+G +V AL++ Y G D+
Sbjct: 432 PRRDSFTYSFLIKALSAAGVAPV-RAVHSHVVKLGSVEDTFVGNALIDAYSKNGGFSDAR 490
Query: 130 KLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPC--------------------- 168
K+FDEMPER++V+WN + +V+ GEL R LF+EMP
Sbjct: 491 KVFDEMPERDVVSWNTAMAAMVREGELAGVRKLFDEMPEKDTVSWNTILDGYTKAGEVEA 550
Query: 169 ----------RNVVSWTGIIDGYTRMNRSNEALALFRKM------------VACE----- 201
RNVVSW+ ++ GY + A +F KM AC
Sbjct: 551 AFELFQRMPERNVVSWSTMVSGYCKKGDLEMARVIFDKMPSKNLVTWTIMVSACAQKGLV 610
Query: 202 ------YTEPSEITI-------LAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNC 248
+ + E ++ +++L A ++G + + IH Y KR V N
Sbjct: 611 DEAGKLFAQMKEASVELDVAAVVSILAACAESGSLSLGKRIHRYVRKRNL-GRSTHVCNA 669
Query: 249 LIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLK 308
LID + KCGC+ A +F+ +V+ K+ VSW SII GFAMHG G +A+E F +M++ G
Sbjct: 670 LIDMFCKCGCVNRADYVFDTETVQ-KDSVSWNSIIGGFAMHGHGDKALELFAQMKQQGFN 728
Query: 309 PNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEK 368
P+ VT ++VL+AC+H G V+EG F M + ++P I+HYGC+ID+LGR G +++A
Sbjct: 729 PDAVTMINVLSACTHMGFVDEGRRHFSNMERDYGIMPQIEHYGCMIDLLGRGGLIKEAVD 788
Query: 369 TALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVG 428
+P E + V+W +LL AC H NVE E ++ +++ G+Y ++ NI A G
Sbjct: 789 LIKSMPWEPNE-VIWGSLLSACRLHKNVEYAEIAVNELSKLQPSNAGNYAVLSNIYAEAG 847
Query: 429 RFGDAERLRRVMDERNAFKVPGCSLV 454
++ D + R M + K G S V
Sbjct: 848 QWSDMAKARMQMKGTGSQKTAGSSWV 873
>gi|125588087|gb|EAZ28751.1| hypothetical protein OsJ_12773 [Oryza sativa Japonica Group]
Length = 698
Score = 246 bits (628), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 138/426 (32%), Positives = 229/426 (53%), Gaps = 23/426 (5%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+N ++ Y+ KA L+ ++ H S P D FT + ++ CA L + +G
Sbjct: 158 WNAMIAGYNQNGLDAKALKLFSRM----LHESSMAP---DEFTITSVLSACANLGNVRIG 210
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPER--NLVTWNVMITGLV 151
Q+HA I + + V AL++ Y G ++++ ++ D+ E N++++ ++ G V
Sbjct: 211 KQVHAYILRTEMAYNSQVTNALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYV 270
Query: 152 KWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITIL 211
K G++E AR +F M R+VV+WT +I GY + R++EA+ LFR M+ C EP+ T+
Sbjct: 271 KIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCG-PEPNSYTLA 329
Query: 212 AVLP-----AIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLF 266
AVL A G C+ I E+ V N +I YA+ G A ++F
Sbjct: 330 AVLSVCASLACLDYGKQIHCRAIRSLLEQSS------SVSNAIITMYARSGSFPWARRMF 383
Query: 267 EDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGL 326
+ + RK ++WTS+I A HG G+EAV F M + G++P+R+T++ VL+ACSH G
Sbjct: 384 DQV-CWRKETITWTSMIVALAQHGQGEEAVGLFEEMLRAGVEPDRITYVGVLSACSHAGF 442
Query: 327 VEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTL 386
V EG ++D++ E ++ P++ HY C++D+L RAG +A++ +P E D + W +L
Sbjct: 443 VNEGKRYYDQIKNEHQIAPEMSHYACMVDLLARAGLFSEAQEFIRRMPVE-PDAIAWGSL 501
Query: 387 LGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAF 446
L AC H N E+ E K+L ++ G Y + N+ + GR+ DA R+ + E+
Sbjct: 502 LSACRVHKNAELAELAAEKLLSIDPNNSGAYSAIANVYSACGRWSDAARIWKARKEKAVR 561
Query: 447 KVPGCS 452
K G S
Sbjct: 562 KETGFS 567
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 106/404 (26%), Positives = 189/404 (46%), Gaps = 46/404 (11%)
Query: 75 FTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDE 134
FT + ++ +CA +G ++H+ + K+G S V V +++NMY G + ++ +F+
Sbjct: 59 FTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETATTVFER 118
Query: 135 MPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALF 194
MP R++ +WN M++ G ++ A SLFE MP R++VSW +I GY + +AL LF
Sbjct: 119 MPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKALKLF 178
Query: 195 RKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYA 254
+M+ P E TI +VL A G+V+ + +H Y R A++ +V N LI TYA
Sbjct: 179 SRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAY-ILRTEMAYNSQVTNALISTYA 237
Query: 255 KCGCIFSASKLFE-----DISV--------------------------ERKNLVSWTSII 283
K G + +A ++ + D++V +++V+WT++I
Sbjct: 238 KSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMI 297
Query: 284 SGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNF----FDKMVE 339
G+ +G EA++ F M G +PN T +VL+ C+ ++ G ++E
Sbjct: 298 VGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLE 357
Query: 340 ECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMG 399
+ + + +I M R+G A + + + + W +++ A + HG G
Sbjct: 358 QSSSVSN-----AIITMYARSGSFPWARRMFDQVCWR-KETITWTSMIVALAQHGQ---G 408
Query: 400 ERVTRKILEMER-GYGGDYVLMYNILAGVGRFGDAERLRRVMDE 442
E EM R G D + +L+ G +R D+
Sbjct: 409 EEAVGLFEEMLRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQ 452
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 118/251 (47%), Gaps = 37/251 (14%)
Query: 150 LVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEIT 209
K G L AR +F EMP R+ VSWT ++ G R R EA+ M A +T P++ T
Sbjct: 2 FAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFT-PTQFT 60
Query: 210 ILAVLP--AIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFE 267
+ VL A+ Q G V + +H + K G + + V N +++ Y KCG +A+ +FE
Sbjct: 61 LTNVLSSCAVTQAGAVG--RKVHSFVVKLGLGSC-VPVANSVLNMYGKCGDSETATTVFE 117
Query: 268 DISVER-----------------------------KNLVSWTSIISGFAMHGMGKEAVEN 298
+ V +++VSW ++I+G+ +G+ +A++
Sbjct: 118 RMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKALKL 177
Query: 299 FGRM-QKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDML 357
F RM + + P+ T SVL+AC++ G V G ++ E+ + + LI
Sbjct: 178 FSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYIL-RTEMAYNSQVTNALISTY 236
Query: 358 GRAGRLEQAEK 368
++G +E A +
Sbjct: 237 AKSGSVENARR 247
>gi|125545880|gb|EAY92019.1| hypothetical protein OsI_13712 [Oryza sativa Indica Group]
Length = 804
Score = 246 bits (628), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 138/426 (32%), Positives = 229/426 (53%), Gaps = 23/426 (5%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+N ++ Y+ KA L+ ++ H S P D FT + ++ CA L + +G
Sbjct: 264 WNAMIAGYNQNGLDAKALKLFSRM----LHESSMAP---DEFTITSVLSACANLGNVRIG 316
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPER--NLVTWNVMITGLV 151
Q+HA I + + V AL++ Y G ++++ ++ D+ E N++++ ++ G V
Sbjct: 317 KQVHAYILRTEMAYNSQVTNALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYV 376
Query: 152 KWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITIL 211
K G++E AR +F M R+VV+WT +I GY + R++EA+ LFR M+ C EP+ T+
Sbjct: 377 KIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCG-PEPNSYTLA 435
Query: 212 AVLP-----AIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLF 266
AVL A G C+ I E+ V N +I YA+ G A ++F
Sbjct: 436 AVLSVCASLACLDYGKQIHCRAIRSLLERSS------SVSNAIITMYARSGSFPWARRMF 489
Query: 267 EDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGL 326
+ + RK ++WTS+I A HG G+EAV F M + G++P+R+T++ VL+ACSH G
Sbjct: 490 DQV-CWRKETITWTSMIVALAQHGQGEEAVGLFEEMLRAGVEPDRITYVGVLSACSHAGF 548
Query: 327 VEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTL 386
V EG ++D++ E ++ P++ HY C++D+L RAG +A++ +P E D + W +L
Sbjct: 549 VNEGKRYYDQIKNEHQIAPEMSHYACMVDLLARAGLFSEAQEFIRRMPVE-PDAIAWGSL 607
Query: 387 LGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAF 446
L AC H N E+ E K+L ++ G Y + N+ + GR+ DA R+ + E+
Sbjct: 608 LSACRVHKNAELAELAAEKLLSIDPNNSGAYSAIANVYSACGRWSDAARIWKARKEKAVR 667
Query: 447 KVPGCS 452
K G S
Sbjct: 668 KETGFS 673
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 107/401 (26%), Positives = 188/401 (46%), Gaps = 40/401 (9%)
Query: 75 FTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDE 134
FT + ++ +CA +G ++H+ + K+G S V V +++NMY G + +S +F+
Sbjct: 165 FTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDAETASTVFER 224
Query: 135 MPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALF 194
MP R++ +WN M++ G ++ A SLFE MP R++VSW +I GY + +AL LF
Sbjct: 225 MPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPGRSIVSWNAMIAGYNQNGLDAKALKLF 284
Query: 195 RKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYA 254
+M+ P E TI +VL A G+V+ + +H Y R A++ +V N LI TYA
Sbjct: 285 SRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAY-ILRTEMAYNSQVTNALISTYA 343
Query: 255 KCGCIFSASKLFE-----DISV--------------------------ERKNLVSWTSII 283
K G + +A ++ + D++V +++V+WT++I
Sbjct: 344 KSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMI 403
Query: 284 SGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEE-CE 342
G+ +G EA++ F M G +PN T +VL+ C+ ++ G + + E
Sbjct: 404 VGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLE 463
Query: 343 VLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERV 402
+ + +I M R+G A + + + + W +++ A + HG GE
Sbjct: 464 RSSSVSN--AIITMYARSGSFPWARRMFDQVCWR-KETITWTSMIVALAQHGQ---GEEA 517
Query: 403 TRKILEMER-GYGGDYVLMYNILAGVGRFGDAERLRRVMDE 442
EM R G D + +L+ G +R D+
Sbjct: 518 VGLFEEMLRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQ 558
Score = 134 bits (337), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 96/330 (29%), Positives = 162/330 (49%), Gaps = 43/330 (13%)
Query: 77 YSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVS----LGFLKDSSKLF 132
Y+ L++ C T ++P G +HA K G + Y+ L++ Y G L+D+ +LF
Sbjct: 29 YARLLQLCQTAANPGAGRAIHARAVKAGLLASAYLCNNLLSYYGETAGGAGGLRDARRLF 88
Query: 133 DEMP--ERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEA 190
DE+P RN+ TWN +++ K G L AR +F EMP R+ VSWT ++ G R R EA
Sbjct: 89 DEIPLARRNVFTWNSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEA 148
Query: 191 LALFRKMVACEYTEPSEITILAVLP--AIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNC 248
+ M A +T P++ T+ VL A+ Q G V + +H + K G + + V N
Sbjct: 149 IKTLLDMTADGFT-PTQFTLTNVLSSCAVTQAGAVG--RKVHSFVVKLGLGSC-VPVANS 204
Query: 249 LIDTYAKCGCIFSASKLFEDISVER-----------------------------KNLVSW 279
+++ Y KCG +AS +FE + V +++VSW
Sbjct: 205 VLNMYGKCGDAETASTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPGRSIVSW 264
Query: 280 TSIISGFAMHGMGKEAVENFGRM-QKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMV 338
++I+G+ +G+ +A++ F RM + + P+ T SVL+AC++ G V G ++
Sbjct: 265 NAMIAGYNQNGLDAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYIL 324
Query: 339 EECEVLPDIKHYGCLIDMLGRAGRLEQAEK 368
E+ + + LI ++G +E A +
Sbjct: 325 -RTEMAYNSQVTNALISTYAKSGSVENARR 353
>gi|297745590|emb|CBI40755.3| unnamed protein product [Vitis vinifera]
Length = 789
Score = 246 bits (628), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 134/426 (31%), Positives = 236/426 (55%), Gaps = 13/426 (3%)
Query: 29 HHSQLFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLS 88
H++ + +L+ + A ++A +L+ Q++++ P D FT + ++ C +
Sbjct: 310 HNAVSWTSLIGGVAQAGFQEEALVLFNQMREV--------PVASDQFTLATVLGVCLSQK 361
Query: 89 HPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMIT 148
++G QLHA G S V V ALV MY G + ++ F+ MP R++++W MIT
Sbjct: 362 DISIGEQLHAHTITRGLDSSVPVANALVTMYAKCGDVWKANHAFELMPIRDIISWTAMIT 421
Query: 149 GLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEI 208
+ G++E AR F++MP RNV+SW ++ Y + E L ++ +M+ E + I
Sbjct: 422 AFSQAGDVEKAREYFDKMPERNVISWNSMLATYMQRGYWEEGLKVYIQMLR-EGVKTDWI 480
Query: 209 TILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFED 268
T + A + I EK GF++ ++ V N ++ Y++CG I A K+F
Sbjct: 481 TFSTSISACADLAVLILGNQILAQAEKLGFSS-NVSVANSVVTMYSRCGQIEEAQKMFSS 539
Query: 269 ISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVE 328
I + KNLVSW ++++G+A +G G++ +E F +M +G P++++++SVL+ CSH G V
Sbjct: 540 IVM--KNLVSWNAMMAGYAQNGQGRKVIEIFEKMLNIGNVPDQISYVSVLSGCSHSGFVS 597
Query: 329 EGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLG 388
EG +F M ++ + P +H+ C++D+LGRAG+LEQA+ +P + + +W LL
Sbjct: 598 EGQYYFLSMTKDHGISPMSEHFVCMVDLLGRAGQLEQAKNLINQMPFK-PNAAIWGALLA 656
Query: 389 ACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKV 448
AC HGN ++ E + +LE++ G Y L+ NI + G+ +R++M ++ K
Sbjct: 657 ACRIHGNTKLAELAVKNLLELDAEGPGSYCLLANIYSESGKIQGVTNVRKLMRDKGVRKN 716
Query: 449 PGCSLV 454
PGCS +
Sbjct: 717 PGCSWI 722
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 97/344 (28%), Positives = 160/344 (46%), Gaps = 58/344 (16%)
Query: 81 IRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNL 140
++ CA+L + +LHA + +G +S +++ L+NMY + G + D+ ++F + N+
Sbjct: 11 MKECASLRSIPIARKLHAQLIFMGLKSSIFLQNHLLNMYSNCGLISDAYRVFGGIMFPNV 70
Query: 141 VTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVAC 200
+WN MI+G G++ A LFE+MP R+ VSW ++ GY
Sbjct: 71 YSWNTMISGFADSGQMREAEKLFEKMPERDSVSWNSMMSGYFHNGE-------------- 116
Query: 201 EYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIF 260
+ A + A G +K +HG+ EK F D V ++D Y KCG +
Sbjct: 117 ---------LEATIKASGSLGYLKLALQLHGFAEKFDF-GIDTCVETSVLDMYIKCGAMD 166
Query: 261 SASKLF-------------------EDISVER----------KNLVSWTSIISGFAMHGM 291
A K+F + SV++ ++ VSW ++IS + HG
Sbjct: 167 FAQKVFCRTPNPSLFCWNSMIYGYSKYGSVKKALELFAKMPERDTVSWNTMISILSQHGF 226
Query: 292 GKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYG 351
G E + F M G +PN +T+ SVL+AC+ +E G + ++V E D+ + G
Sbjct: 227 GAETLNTFLEMWNQGFRPNSMTYASVLSACTSIYDLEWGAHLHARIV-RMEPCLDV-YAG 284
Query: 352 C-LIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHG 394
C LIDM + GRLE A + G+ + V W +L+G + G
Sbjct: 285 CGLIDMYAKCGRLESARQVFDGLTEH--NAVSWTSLIGGVAQAG 326
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 110/416 (26%), Positives = 192/416 (46%), Gaps = 39/416 (9%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHS-HSPLPPLFDSFTYSFLIRTCATLSHPNL 92
+NT++ ++ + ++A L++++ + + S +S + F + I+ +L + L
Sbjct: 73 WNTMISGFADSGQMREAEKLFEKMPERDSVSWNSMMSGYFHNGELEATIKASGSLGYLKL 132
Query: 93 GTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVK 152
QLH K F V T++++MY+ G + + K+F P +L WN MI G K
Sbjct: 133 ALQLHGFAEKFDFGIDTCVETSVLDMYIKCGAMDFAQKVFCRTPNPSLFCWNSMIYGYSK 192
Query: 153 WGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILA 212
+G ++ A LF +MP R+ VSW +I ++ E L F +M + P+ +T +
Sbjct: 193 YGSVKKALELFAKMPERDTVSWNTMISILSQHGFGAETLNTFLEMWNQGF-RPNSMTYAS 251
Query: 213 VLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVE 272
VL A D++ +H R D+ LID YAKCG + SA ++F+ ++
Sbjct: 252 VLSACTSIYDLEWGAHLHAR-IVRMEPCLDVYAGCGLIDMYAKCGRLESARQVFDGLT-- 308
Query: 273 RKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNAC----------- 321
N VSWTS+I G A G +EA+ F +M++V + ++ T +VL C
Sbjct: 309 EHNAVSWTSLIGGVAQAGFQEEALVLFNQMREVPVASDQFTLATVLGVCLSQKDISIGEQ 368
Query: 322 SHGGLVEEGL-------NFFDKMVEEC----------EVLP--DIKHYGCLIDMLGRAGR 362
H + GL N M +C E++P DI + +I +AG
Sbjct: 369 LHAHTITRGLDSSVPVANALVTMYAKCGDVWKANHAFELMPIRDIISWTAMITAFSQAGD 428
Query: 363 LEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYV 418
+E+A + +P +V+ W ++L G E G +V ++L G D++
Sbjct: 429 VEKAREYFDKMPER--NVISWNSMLATYMQRGYWEEGLKVYIQML--REGVKTDWI 480
Score = 45.1 bits (105), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 85/182 (46%), Gaps = 24/182 (13%)
Query: 243 IRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRM 302
I + N L++ Y+ CG I A ++F I N+ SW ++ISGFA G +EA + F +M
Sbjct: 39 IFLQNHLLNMYSNCGLISDAYRVFGGIMF--PNVYSWNTMISGFADSGQMREAEKLFEKM 96
Query: 303 QKVGLKPNR--VTFLSVLNACSHGGLVEEGLNF-----FDKMVEECEVLPDIKHYG---- 351
P R V++ S+++ H G +E + + K+ + + +G
Sbjct: 97 ------PERDSVSWNSMMSGYFHNGELEATIKASGSLGYLKLALQLHGFAEKFDFGIDTC 150
Query: 352 ---CLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILE 408
++DM + G ++ A+K P+ + W +++ S +G+V+ + K+ E
Sbjct: 151 VETSVLDMYIKCGAMDFAQKVFCRTPN--PSLFCWNSMIYGYSKYGSVKKALELFAKMPE 208
Query: 409 ME 410
+
Sbjct: 209 RD 210
>gi|297742136|emb|CBI33923.3| unnamed protein product [Vitis vinifera]
Length = 461
Score = 246 bits (628), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 143/440 (32%), Positives = 225/440 (51%), Gaps = 67/440 (15%)
Query: 75 FTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSS----- 129
+T+ L++ C + G ++HA I K GF+ ++V +L++MY G + D+
Sbjct: 11 YTFPLLVKVCWEIGSIGDGEKIHARILKFGFELDLFVRNSLIHMYSVCGRIGDARAMFEV 70
Query: 130 --------------------------KLFDEMPERNLVTWNVMITGLVKWGELEFARSLF 163
+LF+EMPER+L +WN MI G V G++ A LF
Sbjct: 71 CSISDLVTWNSMIDGYVKNGEIGAARELFEEMPERDLFSWNSMIAGYVGNGDMTAAEDLF 130
Query: 164 EEMPCRNVVSWTGIIDGYT-------------------------------RMNRSNEALA 192
+MP R++VSW +IDGY R+ +E L
Sbjct: 131 NKMPFRDIVSWNCMIDGYAQVQNMEIACELFNWMPYRNVVSWNIMLALYVRIKDYDECLR 190
Query: 193 LFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDT 252
+F KM+ T P+E T+++VL A G + + IH Y + D+ + L+
Sbjct: 191 MFDKMMG--ETMPNEATLVSVLTACAHLGRLDRGKWIHSYIKNNRVIEPDVLLSTALLTM 248
Query: 253 YAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRV 312
YAKCG + A +F+ +S +++VSW S+I G+ MHG +A+E F M+K G PN
Sbjct: 249 YAKCGAMDLARDVFDKMS--NRSVVSWNSMIMGYGMHGQADKALEMFLDMEKRGPMPNDA 306
Query: 313 TFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALG 372
TF+ VL+AC+H G++ EG +FD M ++ P ++HYGC++D+LGRAG ++ E+
Sbjct: 307 TFICVLSACAHSGMILEGWWYFDLMRRAYKIEPKVEHYGCMVDLLGRAGLMKDLEELIRK 366
Query: 373 IPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGD 432
+P E +W LL AC H N E+ E V ++++E+E G Y+L+ NI A G++ D
Sbjct: 367 MPME-GGTALWGALLSACRTHSNSELAEIVAKRLIELEPRDIGPYLLLSNIYAAEGKWDD 425
Query: 433 AERLRRVMDERNAFKVPGCS 452
E +R++M ER K G S
Sbjct: 426 VEIVRKMMKERGLTKTTGLS 445
>gi|449506393|ref|XP_004162737.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g77170-like [Cucumis sativus]
Length = 614
Score = 246 bits (628), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 151/442 (34%), Positives = 239/442 (54%), Gaps = 46/442 (10%)
Query: 16 QIHSHLLTTNSLLHHSQLF--NTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFD 73
QIH+H+L TN L +H F N ++ Y+ E P+ A +Y + Q LP D
Sbjct: 212 QIHAHVLRTNMLENHPSSFYWNIIIRSYTRLEVPRIALFVYIAMLQA-----GILP---D 263
Query: 74 SFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFD 133
+T + + + +LG QLH+V ++GF+ Y + L+++Y
Sbjct: 264 CYTLPIVFKALSLAYAFDLGLQLHSVAIRLGFEFDQYSESGLISLYS------------- 310
Query: 134 EMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALAL 193
K G+LE A +FE+ R + SW II G ++ R+ EA+ +
Sbjct: 311 ------------------KIGDLECACKVFEQNHNRKLGSWNAIIAGLSQGGRAKEAVNM 352
Query: 194 FRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTA-FDIRVLNCLIDT 252
F K+ EP + TI++V A G+++ +H + + T +I +LN LID
Sbjct: 353 FIKLRQSG-LEPDDFTIVSVTSACGSLGNLELSLQMHKFVFQVKVTGKSNILMLNSLIDM 411
Query: 253 YAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRV 312
Y KCG + A K+F ++ +N+ SWTS+I G+AMHG K+A+ENF M++ G+ PN+V
Sbjct: 412 YGKCGRMDLAMKVFSNMG--HRNVSSWTSLIVGYAMHGQVKQALENFQFMREAGVPPNQV 469
Query: 313 TFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALG 372
TF+ VL+AC HGG++ EG ++FD M P + HYGC++D+L +AG LE+A +
Sbjct: 470 TFVGVLSACVHGGMINEGKHYFDMMKNVYGFKPQLPHYGCMVDLLSKAGLLEEARRMIEE 529
Query: 373 IPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGD 432
+P + + ++W L+G C HGNVE+GE + + E+E G YV++ NI A G + +
Sbjct: 530 MPMK-ANSIIWGCLIGGCEKHGNVEIGEWAGKHLQELEPWNDGVYVVLSNIYATNGMWKE 588
Query: 433 AERLRRVMDERNAFKVPGCSLV 454
A+++R VM +R KVPG SL
Sbjct: 589 AQKMRDVMKQRQLAKVPGYSLA 610
>gi|356507694|ref|XP_003522599.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g15300-like [Glycine max]
Length = 535
Score = 246 bits (628), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 156/471 (33%), Positives = 252/471 (53%), Gaps = 63/471 (13%)
Query: 18 HSHLLTTNSLLHHSQLFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTY 77
H+H L + +H+S + NT++ ++ + P +A LY IY H H+ + D FTY
Sbjct: 57 HAHSLFLQTSMHNSFICNTMIRAFANSSYPLQA--LY-----IYNHMHTT-NVVSDHFTY 108
Query: 78 SFLIRTCATLSHP--------------NLGTQLHAVISKVGFQSHVYVNTALVNMYVSLG 123
+F+++ C+ +H + G ++H + K+G + +L+ MY G
Sbjct: 109 NFVLKACSR-AHKFAQEFVKCDEFIIISKGGEVHCTVLKLGLDQDPSIQNSLLCMYSQCG 167
Query: 124 FLKDSSKLFDEMPERNLVTWNVMITG---------------------LVKW--------- 153
+ + LFDE+ R+LV+WN+MI+ +V W
Sbjct: 168 LVHVAQHLFDEISNRSLVSWNIMISAYDRVNDSKSADYLLESMPHKNVVSWNTVIGRYIR 227
Query: 154 -GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILA 212
G++E AR +F+ MP R+ VSW +I G + A+ LF +M E P+E+T+++
Sbjct: 228 LGDIEGARRVFQIMPQRDAVSWNSLIAGCVSVKDYEGAMGLFSEMQNAE-VRPTEVTLIS 286
Query: 213 VLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVE 272
VL A + G ++ IH + G + + N L++ Y+KCG + SA ++F + +
Sbjct: 287 VLGACAETGALEMGSKIHESLKACGHK-IEGYLGNALLNMYSKCGKLNSAWEVFNGMRI- 344
Query: 273 RKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGL---KPNRVTFLSVLNACSHGGLVEE 329
K L W ++I G A+HG +EA++ F M+ GL +PNRVTFL VL ACSH GLV++
Sbjct: 345 -KTLSCWNAMIVGLAVHGYCEEALQLFSEMES-GLDTVRPNRVTFLGVLIACSHKGLVDK 402
Query: 330 GLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGA 389
FD M ++ ++LPDIKHYGC++D+L R G LE+A + P + ++WRTLLGA
Sbjct: 403 ARWNFDHMAKQYKILPDIKHYGCIVDLLSRFGLLEEAHQMIKTAPLQ-NSAILWRTLLGA 461
Query: 390 CSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVM 440
C GNVE+ + +++ ++ R GDYVL+ NI A R+ + ER+R M
Sbjct: 462 CRTQGNVELAKVSFQQLAKLGRLTDGDYVLLSNIYAEAERWDEVERVRSEM 512
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 87/346 (25%), Positives = 143/346 (41%), Gaps = 40/346 (11%)
Query: 95 QLHAVISKVGFQSHVYVNTALV--NMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVK 152
Q+ A+I+K G SH+ L+ + +G L + LF + N N MI
Sbjct: 23 QVQAIITKAGLHSHLPFTAKLIFFSALSPMGNLSHAHSLFLQTSMHNSFICNTMIRAFAN 82
Query: 153 WGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILA 212
A ++ M NVVS D +T N +A + K A E+ + E I++
Sbjct: 83 SSYPLQALYIYNHMHTTNVVS-----DHFT-YNFVLKACSRAHKF-AQEFVKCDEFIIIS 135
Query: 213 VLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVE 272
+ G+V L G + D + N L+ Y++CG + A LF++IS
Sbjct: 136 ------KGGEVHCTVLKLGLDQ-------DPSIQNSLLCMYSQCGLVHVAQHLFDEIS-- 180
Query: 273 RKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLN 332
++LVSW +IS + K A M N V++ +V+ G +E
Sbjct: 181 NRSLVSWNIMISAYDRVNDSKSADYLLESMP----HKNVVSWNTVIGRYIRLGDIEGARR 236
Query: 333 FFDKMVEECEVLPDIKHYGCLI--DMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGAC 390
F M + V + GC+ D G G + + + P+E+T + V LGAC
Sbjct: 237 VFQIMPQRDAVSWNSLIAGCVSVKDYEGAMGLFSEMQNAEVR-PTEVTLISV----LGAC 291
Query: 391 SFHGNVEMGERVTRKILEME---RGYGGDYVLMYNILAGVGRFGDA 433
+ G +EMG ++ + GY G+ +L N+ + G+ A
Sbjct: 292 AETGALEMGSKIHESLKACGHKIEGYLGNALL--NMYSKCGKLNSA 335
>gi|168003497|ref|XP_001754449.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694551|gb|EDQ80899.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 723
Score = 246 bits (627), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 144/405 (35%), Positives = 224/405 (55%), Gaps = 51/405 (12%)
Query: 57 LQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALV 116
L+ + T + + P + T++ +++ C T + G ++H I + G+ ++V +L+
Sbjct: 234 LELLETMQQAEVAP--NKITFASILQGCTTPAALEHGKKVHRYIIQSGYGRELWVVNSLI 291
Query: 117 NMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTG 176
MY K G LE AR LF ++P R+VV+WT
Sbjct: 292 TMYC-------------------------------KCGGLEEARKLFSDLPHRDVVTWTA 320
Query: 177 IIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVL-----PAIWQNGDVKSCQLIH- 230
++ GY ++ +EA+ LFR+M + +P ++T +VL PA Q G QL+H
Sbjct: 321 MVTGYAQLGFHDEAINLFRRMQQ-QGIKPDKMTFTSVLTSCSSPAFLQEGKRIHQQLVHA 379
Query: 231 GYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGF-AMH 289
GY D+ + + L+ YAKCG + AS +F +S +N+V+WT+II+G A H
Sbjct: 380 GYN-------LDVYLQSALVSMYAKCGSMDDASLVFNQMS--ERNVVAWTAIITGCCAQH 430
Query: 290 GMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKH 349
G +EA+E F +M+K G+KP++VTF SVL+AC+H GLVEEG F M + + P ++H
Sbjct: 431 GRCREALEYFDQMKKQGIKPDKVTFTSVLSACTHVGLVEEGRKHFRSMYLDYGIKPMVEH 490
Query: 350 YGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEM 409
Y C +D+LGRAG LE+AE L +P I VW LL AC H +VE GER +L++
Sbjct: 491 YSCFVDLLGRAGHLEEAENVILSMPF-IPGPSVWGALLSACRVHSDVERGERAAENVLKL 549
Query: 410 ERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
+ G YV + +I A GR+ DAE++R+VM++R+ K PG S +
Sbjct: 550 DPDDDGAYVALSSIYAAAGRYEDAEKVRQVMEKRDVVKEPGQSWI 594
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 101/372 (27%), Positives = 171/372 (45%), Gaps = 51/372 (13%)
Query: 73 DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLF 132
D T+ L+ LG ++H I + G + V T+LV MY G + + +F
Sbjct: 147 DKVTFVSLLNAFTNPELLQLGQKVHMEIVEAGLELEPRVGTSLVGMYAKCGDISKARVIF 206
Query: 133 DEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALA 192
D +PE+N+VTW ++I G + G+++ A L E M V
Sbjct: 207 DRLPEKNVVTWTLLIAGYAQQGQVDVALELLETMQQAEVA-------------------- 246
Query: 193 LFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDT 252
P++IT ++L ++ + +H Y + G+ ++ V+N LI
Sbjct: 247 ------------PNKITFASILQGCTTPAALEHGKKVHRYIIQSGY-GRELWVVNSLITM 293
Query: 253 YAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRV 312
Y KCG + A KLF D+ +++V+WT++++G+A G EA+ F RMQ+ G+KP+++
Sbjct: 294 YCKCGGLEEARKLFSDLP--HRDVVTWTAMVTGYAQLGFHDEAINLFRRMQQQGIKPDKM 351
Query: 313 TFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALG 372
TF SVL +CS ++EG ++V L D+ L+ M + G ++ A
Sbjct: 352 TFTSVLTSCSSPAFLQEGKRIHQQLVHAGYNL-DVYLQSALVSMYAKCGSMDDA-SLVFN 409
Query: 373 IPSEITDVVVWRTLL-GACSFHGNVEMGERVTRKILE-----MERGYGGDYVLMYNILAG 426
SE +VV W ++ G C+ HG R+ LE ++G D V ++L+
Sbjct: 410 QMSE-RNVVAWTAIITGCCAQHGRC-------REALEYFDQMKKQGIKPDKVTFTSVLSA 461
Query: 427 VGRFGDAERLRR 438
G E R+
Sbjct: 462 CTHVGLVEEGRK 473
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 105/416 (25%), Positives = 173/416 (41%), Gaps = 92/416 (22%)
Query: 74 SFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFD 133
S + L++ CA L G ++HA I K G Q + Y+ L++MY G L D+ ++FD
Sbjct: 47 SDVFRGLLQECARLRSLEQGREVHAAILKSGIQPNRYLENTLLSMYAKCGSLTDARRVFD 106
Query: 134 EMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALAL 193
+ +RN+V+W MI V + A +E M
Sbjct: 107 SIRDRNIVSWTAMIEAFVAGNKNLEAFKCYETM--------------------------- 139
Query: 194 FRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTY 253
K+ C +P ++T +++L A ++ Q +H + G + RV L+ Y
Sbjct: 140 --KLAGC---KPDKVTFVSLLNAFTNPELLQLGQKVHMEIVEAGLE-LEPRVGTSLVGMY 193
Query: 254 AKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVT 313
AKCG I A +F+ + KN+V+WT +I+G+A G A+E MQ+ + PN++T
Sbjct: 194 AKCGDISKARVIFDRLP--EKNVVTWTLLIAGYAQQGQVDVALELLETMQQAEVAPNKIT 251
Query: 314 FLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYG-------CLIDMLGRAGRLEQA 366
F S+L C+ +E G +++ YG LI M + G LE+A
Sbjct: 252 FASILQGCTTPAALEHGKKVHRYIIQ--------SGYGRELWVVNSLITMYCKCGGLEEA 303
Query: 367 EKTALGIPSEITDVVVW-----------------------------------RTLLGACS 391
K +P DVV W ++L +CS
Sbjct: 304 RKLFSDLPHR--DVVTWTAMVTGYAQLGFHDEAINLFRRMQQQGIKPDKMTFTSVLTSCS 361
Query: 392 FHGNVEMGERVTRKILEMERGYGGDYVL---MYNILAGVGRFGDAERLRRVMDERN 444
++ G+R+ ++++ GY D L + ++ A G DA + M ERN
Sbjct: 362 SPAFLQEGKRIHQQLVHA--GYNLDVYLQSALVSMYAKCGSMDDASLVFNQMSERN 415
>gi|224141427|ref|XP_002324074.1| predicted protein [Populus trichocarpa]
gi|222867076|gb|EEF04207.1| predicted protein [Populus trichocarpa]
Length = 636
Score = 246 bits (627), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 140/409 (34%), Positives = 234/409 (57%), Gaps = 14/409 (3%)
Query: 47 PQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQ 106
P + F +K++++ + D + C + +G Q + K+G
Sbjct: 103 PSEGFFFFKEMRKEGV--------VLDDVAMISVFVLCTRVEDLGMGRQAQGCLVKMGLG 154
Query: 107 SHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEM 166
V V A++NMYV G +++ ++F EM ERN+V+W+ ++ G+VKW +E R +F+EM
Sbjct: 155 LGVKVCNAIMNMYVKCGLVEEVRRVFCEMNERNVVSWSTLLEGVVKWEGVENGRVVFDEM 214
Query: 167 PCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSC 226
P RN V WT +I GY S E L +MV + +T+ ++L A Q+GDV
Sbjct: 215 PERNEVGWTIMIAGYVGNGFSREGFLLLDEMVLRFRLGLNFVTLSSILSACAQSGDVLMG 274
Query: 227 QLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGF 286
+ +H Y K I V L+D YAKCG I A K+F+ + ++N+V+W +++ G
Sbjct: 275 RWVHVYALKGMGREMHIMVGTALVDMYAKCGPIDMAFKVFKYLP--KRNVVAWNAMLGGL 332
Query: 287 AMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPD 346
AMHG GK ++ F +M + KP+ +TF++VL+ACSH GLV++G ++F + E P
Sbjct: 333 AMHGRGKFVLDIFPKMIEEA-KPDDLTFMAVLSACSHSGLVDQGYHYFRSLESEYGTTPK 391
Query: 347 IKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKI 406
I+HY C++D+LGRAG LE+A +P +VV+ +LLG+C+ HG +++GER+ +++
Sbjct: 392 IEHYACMVDILGRAGHLEEAVMLIKKMPMCPNEVVLG-SLLGSCNAHGKLQLGERILQEL 450
Query: 407 LEMERGYGGDY-VLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
++M+ G+ +Y VL+ N+ G+ A LR+++ + KVPG S +
Sbjct: 451 IQMD-GHNTEYHVLLSNMYVLEGKQDKANSLRQILKSKGIRKVPGVSSI 498
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 84/380 (22%), Positives = 151/380 (39%), Gaps = 82/380 (21%)
Query: 68 LPPLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQS---HVYVNTALVNMYVSLGF 124
LP F S L+R+CA S + G +LHAVI G S + ++ AL ++Y S G
Sbjct: 14 LPARFRS-----LLRSCARNSSLSTGKKLHAVILTSGLASSSPNTFLLNALHHLYASCGV 68
Query: 125 LKDSSKLFDEMPE--RNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYT 182
+ LF ++P +++ W ++T LV+ G
Sbjct: 69 TSSARHLFYQIPRSHKDVTDWTTLLTSLVQHG---------------------------- 100
Query: 183 RMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFD 242
+ +E F++M E ++ +++V + D+ + G K G
Sbjct: 101 --TKPSEGFFFFKEMRK-EGVVLDDVAMISVFVLCTRVEDLGMGRQAQGCLVKMGL-GLG 156
Query: 243 IRVLNCLIDTYAKCGCIFSASKLFEDIS-----------------------------VER 273
++V N +++ Y KCG + ++F +++ +
Sbjct: 157 VKVCNAIMNMYVKCGLVEEVRRVFCEMNERNVVSWSTLLEGVVKWEGVENGRVVFDEMPE 216
Query: 274 KNLVSWTSIISGFAMHGMGKEAVENFGRMQ-KVGLKPNRVTFLSVLNACSHGGLVEEG-- 330
+N V WT +I+G+ +G +E M + L N VT S+L+AC+ G V G
Sbjct: 217 RNEVGWTIMIAGYVGNGFSREGFLLLDEMVLRFRLGLNFVTLSSILSACAQSGDVLMGRW 276
Query: 331 --LNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLG 388
+ M E ++ L+DM + G ++ A K +P +VV W +LG
Sbjct: 277 VHVYALKGMGREMHIMVGT----ALVDMYAKCGPIDMAFKVFKYLPKR--NVVAWNAMLG 330
Query: 389 ACSFHGNVEMGERVTRKILE 408
+ HG + + K++E
Sbjct: 331 GLAMHGRGKFVLDIFPKMIE 350
>gi|449451309|ref|XP_004143404.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g21090-like [Cucumis sativus]
gi|449526377|ref|XP_004170190.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g21090-like [Cucumis sativus]
Length = 577
Score = 246 bits (627), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 144/412 (34%), Positives = 225/412 (54%), Gaps = 11/412 (2%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+NTL+ ++ ++ +++Q+QQ + L L D T + TCA L
Sbjct: 111 YNTLISSFTHHGLYVESMNIFRQMQQDF-----DLLAL-DEITLVSIAGTCACLGALEFL 164
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
Q+H +G + ++ V A+V+ Y G S +F M ER++VTW M+ +
Sbjct: 165 RQVHGAAIVIGLEFNMIVCNAIVDAYGKCGDPDASYSIFSRMKERDVVTWTSMVVAYNQT 224
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
L+ A +F MP +NV +WT +I+ + SNEAL LF++M+ E T P+ T + V
Sbjct: 225 SRLDDAFRVFSCMPVKNVHTWTALINALVKNKYSNEALDLFQQMLE-EKTSPNAFTFVGV 283
Query: 214 LPAIWQNGDVKSCQLIHGYGEKRG--FTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISV 271
L A + + IHG +R ++ V N LID Y+K G + SA LF I
Sbjct: 284 LSACADLALIAKGKEIHGLIIRRSSELNFPNVYVCNALIDLYSKSGDVKSARMLFNLIL- 342
Query: 272 ERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGL 331
K++VSW S+I+GFA +G+G+EA+ F +M +VG++PN+VTFL+VL+ACSH GL EGL
Sbjct: 343 -EKDVVSWNSLITGFAQNGLGREALLAFRKMTEVGIRPNKVTFLAVLSACSHTGLSSEGL 401
Query: 332 NFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACS 391
+ M + ++ P ++HY +IDM GR RL +A P+ V +W +LGAC
Sbjct: 402 CILELMEKFYDIEPSLEHYAVMIDMFGRENRLAEALDLISRAPNGSKHVGIWGAVLGACR 461
Query: 392 FHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDER 443
H N+++ R + EME G YV++ N+ A R+ DA +R++M+ER
Sbjct: 462 IHENLDLAIRAAETLFEMEPDNAGRYVMLSNVFAAASRWMDAHNVRKLMEER 513
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 94/363 (25%), Positives = 171/363 (47%), Gaps = 40/363 (11%)
Query: 67 PLPPLFDSFTY-SFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFL 125
PL LF SF + + L C H +G LH+ + K +++ L++MY +
Sbjct: 3 PLSDLFPSFDHCARLFSKCIQHKHLRVGMSLHSHLIKTALSFDLFLANRLIDMYSKCNSM 62
Query: 126 KDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMN 185
+++ K FD++P RN+ +WN ++ + G AR +F+EMP N+VS+ +I +T
Sbjct: 63 ENAQKAFDDLPIRNIHSWNTILASYSRAGFFSQARKVFDEMPHPNIVSYNTLISSFTHHG 122
Query: 186 RSNEALALFRKMVA-CEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIR 244
E++ +FR+M + EIT++++ G ++ + +HG G F++
Sbjct: 123 LYVESMNIFRQMQQDFDLLALDEITLVSIAGTCACLGALEFLRQVHGAAIVIGLE-FNMI 181
Query: 245 VLNCLIDTYAKCG------CIFS-------------------------ASKLFEDISVER 273
V N ++D Y KCG IFS A ++F + V
Sbjct: 182 VCNAIVDAYGKCGDPDASYSIFSRMKERDVVTWTSMVVAYNQTSRLDDAFRVFSCMPV-- 239
Query: 274 KNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNF 333
KN+ +WT++I+ + EA++ F +M + PN TF+ VL+AC+ L+ +G
Sbjct: 240 KNVHTWTALINALVKNKYSNEALDLFQQMLEEKTSPNAFTFVGVLSACADLALIAKGKEI 299
Query: 334 FDKMVEECEVL--PDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACS 391
++ L P++ LID+ ++G ++ A + + E DVV W +L+ +
Sbjct: 300 HGLIIRRSSELNFPNVYVCNALIDLYSKSGDVKSA-RMLFNLILE-KDVVSWNSLITGFA 357
Query: 392 FHG 394
+G
Sbjct: 358 QNG 360
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 100/209 (47%), Gaps = 14/209 (6%)
Query: 240 AFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENF 299
+FD+ + N LID Y+KC + +A K F+D+ + +N+ SW +I++ ++ G +A + F
Sbjct: 43 SFDLFLANRLIDMYSKCNSMENAQKAFDDLPI--RNIHSWNTILASYSRAGFFSQARKVF 100
Query: 300 GRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLP----DIKHYGCLID 355
M PN V++ +++++ +H GL E +N F +M ++ ++L +
Sbjct: 101 DEMPH----PNIVSYNTLISSFTHHGLYVESMNIFRQMQQDFDLLALDEITLVSIAGTCA 156
Query: 356 MLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGG 415
LG L Q A+ I E +++V ++ A G+ + + ++ E +
Sbjct: 157 CLGALEFLRQVHGAAIVIGLEF-NMIVCNAIVDAYGKCGDPDASYSIFSRMKERDVVTWT 215
Query: 416 DYVLMYNILAGVGRFGDAERLRRVMDERN 444
V+ YN R DA R+ M +N
Sbjct: 216 SMVVAYN---QTSRLDDAFRVFSCMPVKN 241
>gi|6729034|gb|AAF27030.1|AC009177_20 hypothetical protein [Arabidopsis thaliana]
Length = 548
Score = 246 bits (627), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 161/484 (33%), Positives = 249/484 (51%), Gaps = 75/484 (15%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNL 92
++N+++ YS + +P KA + Y Q++ +SP D FT+ ++++ C+ L
Sbjct: 74 IWNSMIRGYSNSPNPDKALIFY---QEMLRKGYSP-----DYFTFPYVLKACSGLRDIQF 125
Query: 93 GTQLHAVISKVGFQSHVYVNTALVNMYVSL--------------------------GFLK 126
G+ +H + K GF+ ++YV+T L++MY+ GF+
Sbjct: 126 GSCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVN 185
Query: 127 -----DSSKLFDEMPERNL-------------------------VTWNVMI-TGLV---- 151
D+ + F EM + V +NV++ T L+
Sbjct: 186 NNRFSDAIEAFREMQSNGVKANETIMVDLLVACGRCFDPYFQSKVGFNVILATSLIDMYA 245
Query: 152 KWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITIL 211
K G+L AR LF+ MP R +VSW II GY++ + EAL +F M+ P ++T L
Sbjct: 246 KCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDMLDLGIA-PDKVTFL 304
Query: 212 AVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISV 271
+V+ A G + Q IH Y K GF D ++ L++ YAK G SA K FED+
Sbjct: 305 SVIRASMIQGCSQLGQSIHAYVSKTGFVK-DAAIVCALVNMYAKTGDAESAKKAFEDL-- 361
Query: 272 ERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVG-LKPNRVTFLSVLNACSHGGLVEEG 330
E+K+ ++WT +I G A HG G EA+ F RMQ+ G P+ +T+L VL ACSH GLVEEG
Sbjct: 362 EKKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGITYLGVLYACSHIGLVEEG 421
Query: 331 LNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGAC 390
+F +M + + P ++HYGC++D+L RAGR E+AE+ +P + +V +W LL C
Sbjct: 422 QRYFAEMRDLHGLEPTVEHYGCMVDILSRAGRFEEAERLVKTMPVK-PNVNIWGALLNGC 480
Query: 391 SFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPG 450
H N+E+ +R+ + E E G YVL+ NI A GR+ D + +R M + KV G
Sbjct: 481 DIHENLELTDRIRSMVAEPEELGSGIYVLLSNIYAKAGRWADVKLIRESMKSKRVDKVLG 540
Query: 451 CSLV 454
S V
Sbjct: 541 HSSV 544
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 131/275 (47%), Gaps = 19/275 (6%)
Query: 123 GFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYT 182
G + SS + + +P L+ + T + L +ARS+FE + C +V W +I GY+
Sbjct: 27 GLMIKSSVIRNVIPLSRLIDF---CTTCPETMNLSYARSVFESIDCPSVYIWNSMIRGYS 83
Query: 183 RMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFD 242
++AL +++M+ Y+ P T VL A D++ +HG+ K GF +
Sbjct: 84 NSPNPDKALIFYQEMLRKGYS-PDYFTFPYVLKACSGLRDIQFGSCVHGFVVKTGFEV-N 141
Query: 243 IRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRM 302
+ V CL+ Y CG + ++FEDI + N+V+W S+ISGF + +A+E F M
Sbjct: 142 MYVSTCLLHMYMCCGEVNYGLRVFEDIP--QWNVVAWGSLISGFVNNNRFSDAIEAFREM 199
Query: 303 QKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGR 362
Q G+K N + +L AC FD + +V ++ LIDM + G
Sbjct: 200 QSNGVKANETIMVDLLVACGR---------CFDPYFQS-KVGFNVILATSLIDMYAKCGD 249
Query: 363 LEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVE 397
L A G+P +V W +++ S +G+ E
Sbjct: 250 LRTARYLFDGMPERT--LVSWNSIITGYSQNGDAE 282
>gi|345505212|gb|AEN99830.1| chlororespiratory reduction 4, partial [Brassica oleracea]
Length = 590
Score = 246 bits (627), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 130/343 (37%), Positives = 208/343 (60%), Gaps = 6/343 (1%)
Query: 113 TALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVV 172
+++ YV G ++D+ LF+ MP R++VTW +MI G K G + A++LF++MP R+VV
Sbjct: 241 NSMIGGYVKHGRIEDAKGLFNVMPRRDVVTWAIMIDGYGKLGLVHVAKTLFDQMPHRDVV 300
Query: 173 SWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGY 232
++ ++ GY + EAL +F M + P E +++ VL AI Q G + +H Y
Sbjct: 301 AYNSMMSGYVQNRYHMEALEVFNHMEKESHLTPDETSLVIVLSAIAQLGRLSKAIDMHLY 360
Query: 233 GEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMG 292
++ F ++ LID Y+KCG I A ++FE I E K++ W ++I G A+HG+G
Sbjct: 361 IVEKQF-PLSGKLGVALIDMYSKCGSIQHAMRVFEGI--ESKSIDHWNAMIGGLAVHGLG 417
Query: 293 KEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGC 352
+ A + ++++ +KP+ +TF+ VLNACSH GLV+EGL F+ M + ++ P ++HYGC
Sbjct: 418 ESAFDMLFQIERRSIKPDHITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGC 477
Query: 353 LIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERG 412
++D+L R+G ++ A G+P E D V+WRT L ACS H E GE V + ++ + G
Sbjct: 478 MVDILARSGSIKLARNLIEGMPIEPND-VIWRTFLTACSHHKEFETGELVAKHLI-LXGG 535
Query: 413 YG-GDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
Y YVL+ N+ A G + D R+R +M E+N K+PGCS +
Sbjct: 536 YNPSSYVLLSNMYASNGMWKDVRRVRTMMKEKNIEKIPGCSWI 578
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 113/400 (28%), Positives = 202/400 (50%), Gaps = 34/400 (8%)
Query: 18 HSHLLTTNSLLHHSQLFNTLLHFYSLAESPQKA-FLLYKQLQQIYTHSHSPLPPLFDSFT 76
H H ++++ + L+N ++ +S P+KA FLL L+ S +P D F+
Sbjct: 58 HEHHVSSSGEVEDPFLWNVVIKSHSHGVDPRKALFLLCLMLE-------SSVP--VDKFS 108
Query: 77 YSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMP 136
S ++ C+ L GTQ+H + K G S +++ L+ +Y+ GFL + ++FD MP
Sbjct: 109 LSLALKACSRLGFVKEGTQVHGFLIKTGTWSDLFLQNCLIGLYIKCGFLGFARQVFDRMP 168
Query: 137 ERNLVTWNVMITGLVKWGELEFARSLFEEMP--CRNVVSWTGIIDGYT-RMNRSNEALAL 193
ER+ V++N MI G VK G +E A LF+ MP RN+++W +I GY R + + A L
Sbjct: 169 ERDSVSYNSMIDGYVKCGLVESAGELFDLMPREKRNLITWNSMIGGYAQRADGVDVAEKL 228
Query: 194 FRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTY 253
F +M E I+ +++ ++G ++ + + +R D+ +ID Y
Sbjct: 229 FDEM-----PEKDLISWNSMIGGYVKHGRIEDAKGLFNVMPRR-----DVVTWAIMIDGY 278
Query: 254 AKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVG-LKPNRV 312
K G + A LF+ + +++V++ S++SG+ + EA+E F M+K L P+
Sbjct: 279 GKLGLVHVAKTLFDQMP--HRDVVAYNSMMSGYVQNRYHMEALEVFNHMEKESHLTPDET 336
Query: 313 TFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYG-CLIDMLGRAGRLEQAEKTAL 371
+ + VL+A + G + + ++ +VE + P G LIDM + G ++ A +
Sbjct: 337 SLVIVLSAIAQLGRLSKAIDMHLYIVE--KQFPLSGKLGVALIDMYSKCGSIQHAMRVFE 394
Query: 372 GIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMER 411
GI S+ D W ++G + HG +GE + ++ER
Sbjct: 395 GIESKSID--HWNAMIGGLAVHG---LGESAFDMLFQIER 429
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/256 (19%), Positives = 101/256 (39%), Gaps = 40/256 (15%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+N+++ Y +A ++ +++ S L P D + ++ A L +
Sbjct: 302 YNSMMSGYVQNRYHMEALEVFNHMEK-----ESHLTP--DETSLVIVLSAIAQLGRLSKA 354
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
+H I + F + AL++MY G ++ + ++F+ + +++ WN MI GL
Sbjct: 355 IDMHLYIVEKQFPLSGKLGVALIDMYSKCGSIQHAMRVFEGIESKSIDHWNAMIGGLAVH 414
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
G E A + ++ R++ +P IT + V
Sbjct: 415 GLGESAFDMLFQIERRSI--------------------------------KPDHITFVGV 442
Query: 214 LPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVER 273
L A +G VK L ++ ++ C++D A+ G I A L E + +E
Sbjct: 443 LNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDILARSGSIKLARNLIEGMPIE- 501
Query: 274 KNLVSWTSIISGFAMH 289
N V W + ++ + H
Sbjct: 502 PNDVIWRTFLTACSHH 517
>gi|225454363|ref|XP_002276073.1| PREDICTED: pentatricopeptide repeat-containing protein At2g46050,
mitochondrial [Vitis vinifera]
Length = 673
Score = 246 bits (627), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 144/420 (34%), Positives = 222/420 (52%), Gaps = 44/420 (10%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNL 92
L+N ++ Y+L KAF ++K ++ D+FT++ +I +C L L
Sbjct: 246 LWNVMVSCYALNGVQGKAFGVFKLMRLEGVKG--------DNFTFTSMINSCGVLGSCGL 297
Query: 93 GTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVK 152
G Q+H +I ++ F V V +ALV+MY K
Sbjct: 298 GKQVHGLIIRLSFDLDVLVASALVDMYS-------------------------------K 326
Query: 153 WGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILA 212
+E AR F+ M +N+VSWT +I GY + EA+ L ++M+ YT P E+ + +
Sbjct: 327 NENIEDARKAFDGMIVKNIVSWTTMIVGYGQHGDGKEAMRLLQEMIRV-YTYPDELALAS 385
Query: 213 VLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVE 272
+L + +H Y + GF AF + + N L+ Y+KCG I SA + F SV
Sbjct: 386 ILSSCGNLSATSEVVQVHAYVVENGFEAF-LSIANALVSAYSKCGSIGSAFQSFS--SVA 442
Query: 273 RKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLN 332
+++SWTS++ +A HG+ KE VE F +M ++P++V FL VL+AC+HGG V EGL+
Sbjct: 443 EPDIISWTSLMGAYAFHGLSKEGVEVFEKMLFSNVRPDKVAFLGVLSACAHGGFVLEGLH 502
Query: 333 FFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSF 392
+F+ M+ +++PD +HY C+ID+LGRAG L++A +P E + LGAC
Sbjct: 503 YFNLMINVYQIMPDSEHYTCIIDLLGRAGFLDEAINLLTSMPVEPRSDTL-GAFLGACKV 561
Query: 393 HGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCS 452
H NV + + K+ ME +Y LM N+ A VG + D R+R++M ER FKVPGCS
Sbjct: 562 HRNVGLARWASEKLFVMEPNEPANYSLMSNMYASVGHWFDVARVRKLMRERCDFKVPGCS 621
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 102/368 (27%), Positives = 177/368 (48%), Gaps = 41/368 (11%)
Query: 76 TYSF---LIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLF 132
T+SF ++ A L + G QLHA + K+G + + + ++++YV D K+F
Sbjct: 72 THSFSSHALKISAKLGFLHGGKQLHAHVIKLGNCNLLSLQNQVLHVYVKCKEFNDVCKMF 131
Query: 133 DEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALA 192
DEMP +N+V+WN +I G+V+ G +FA R+
Sbjct: 132 DEMPLKNVVSWNTLICGVVE-GNCKFA---------------------LVRL-----GFH 164
Query: 193 LFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDT 252
FR+MV E P+ IT+ +L A + DV C+ +H + K GF + + V + L+D+
Sbjct: 165 YFRQMVL-EMMAPNCITLNGLLRASIELNDVGICRQLHCFILKSGFDS-NCFVGSALVDS 222
Query: 253 YAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRV 312
YAK G + A F+++S ++LV W ++S +A++G+ +A F M+ G+K +
Sbjct: 223 YAKFGLVDEAQSAFDEVS--SRDLVLWNVMVSCYALNGVQGKAFGVFKLMRLEGVKGDNF 280
Query: 313 TFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALG 372
TF S++N+C G G ++ L D+ L+DM + +E A K G
Sbjct: 281 TFTSMINSCGVLGSCGLGKQVHGLIIRLSFDL-DVLVASALVDMYSKNENIEDARKAFDG 339
Query: 373 IPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYG-GDYVLMYNILAGVGRFG 431
+ + ++V W T++ HG+ G+ R + EM R Y D + + +IL+ G
Sbjct: 340 MI--VKNIVSWTTMIVGYGQHGD---GKEAMRLLQEMIRVYTYPDELALASILSSCGNLS 394
Query: 432 DAERLRRV 439
+ +V
Sbjct: 395 ATSEVVQV 402
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 90/336 (26%), Positives = 152/336 (45%), Gaps = 40/336 (11%)
Query: 73 DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLF 132
+ T + L+R L+ + QLH I K GF S+ +V +ALV+ Y G + ++ F
Sbjct: 177 NCITLNGLLRASIELNDVGICRQLHCFILKSGFDSNCFVGSALVDSYAKFGLVDEAQSAF 236
Query: 133 DEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALA 192
DE+ R+LV WNVM++ C Y +A
Sbjct: 237 DEVSSRDLVLWNVMVS-------------------C------------YALNGVQGKAFG 265
Query: 193 LFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDT 252
+F K++ E + T +++ + G + +HG + F D+ V + L+D
Sbjct: 266 VF-KLMRLEGVKGDNFTFTSMINSCGVLGSCGLGKQVHGLIIRLSFD-LDVLVASALVDM 323
Query: 253 YAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRV 312
Y+K I A K F+ + V KN+VSWT++I G+ HG GKEA+ M +V P+ +
Sbjct: 324 YSKNENIEDARKAFDGMIV--KNIVSWTTMIVGYGQHGDGKEAMRLLQEMIRVYTYPDEL 381
Query: 313 TFLSVLNACSHGGLVEEGLNFFDKMVEEC-EVLPDIKHYGCLIDMLGRAGRLEQAEKTAL 371
S+L++C + E + +VE E I + L+ + G + A ++
Sbjct: 382 ALASILSSCGNLSATSEVVQVHAYVVENGFEAFLSIAN--ALVSAYSKCGSIGSAFQSFS 439
Query: 372 GIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKIL 407
+ D++ W +L+GA +FHG + G V K+L
Sbjct: 440 SVAE--PDIISWTSLMGAYAFHGLSKEGVEVFEKML 473
>gi|297821463|ref|XP_002878614.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324453|gb|EFH54873.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 588
Score = 246 bits (627), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 139/421 (33%), Positives = 228/421 (54%), Gaps = 31/421 (7%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+N L++ Y +KA +YK ++ S P D T L+ +CA L N G
Sbjct: 150 WNCLINGYKKIGEGEKAIEVYKVME-----SEGVKP---DDVTMIGLVSSCAMLGDLNRG 201
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
+ + + G + + + AL++M+ G + ++ ++FD + +R +V+
Sbjct: 202 KEFYEYVKANGLRMTIPLANALMDMFSKCGDIHEARRIFDNLEKRTIVS----------- 250
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
LF++M ++VV W +I G + RS +ALALF++M T+P EIT++
Sbjct: 251 -------KLFDDMEEKDVVMWNAMIGGSVQAKRSQDALALFQEMQTSN-TDPDEITMIHC 302
Query: 214 LPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVER 273
L A Q G + IH Y EK + ++ + L+D YAKCG I A +F I +
Sbjct: 303 LSACSQLGALDVGIWIHRYIEKHSLS-LNVALGTSLVDMYAKCGNISEALCVFHGI--QT 359
Query: 274 KNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNF 333
+N +++T+II G A+HG A+ F M G+ P+ +TF+ +L+AC HGG+++ G ++
Sbjct: 360 RNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDY 419
Query: 334 FDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFH 393
F +M + P +KHY ++D+LGRAG LE+A+K +P E D VW LL C H
Sbjct: 420 FSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADKLMESMPME-ADAAVWGALLFGCRMH 478
Query: 394 GNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSL 453
GNV++GE+ +K+LE++ G YVL+ + + DA+R RR+M+ER K+PGCS
Sbjct: 479 GNVKLGEKAAKKLLELDPSDSGIYVLLDGMYGEANMWEDAKRARRMMNERGVEKIPGCSS 538
Query: 454 V 454
+
Sbjct: 539 I 539
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 90/374 (24%), Positives = 176/374 (47%), Gaps = 52/374 (13%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+N + +S +E+P+ A L YKQ+ + P D FTY L + CA L +LG
Sbjct: 46 WNVTIRGFSESENPKDAVLAYKQMLRRGCCESRP-----DHFTYPVLFKVCADLRLNSLG 100
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
+ + K+ + +V+ A ++M+ S G ++++ K+FDE P R+LV+WN +I G K
Sbjct: 101 HMILGHVFKLRLELVSHVHNASIHMFASCGEMENARKVFDESPVRDLVSWNCLINGYKKI 160
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
GE E A ++ K++ E +P ++T++ +
Sbjct: 161 GEGEKAIEVY--------------------------------KVMESEGVKPDDVTMIGL 188
Query: 214 LPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDI---- 269
+ + GD+ + + Y + G I + N L+D ++KCG I A ++F+++
Sbjct: 189 VSSCAMLGDLNRGKEFYEYVKANGLR-MTIPLANALMDMFSKCGDIHEARRIFDNLEKRT 247
Query: 270 -------SVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACS 322
+E K++V W ++I G ++A+ F MQ P+ +T + L+ACS
Sbjct: 248 IVSKLFDDMEEKDVVMWNAMIGGSVQAKRSQDALALFQEMQTSNTDPDEITMIHCLSACS 307
Query: 323 HGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVV 382
G ++ G+ + + +E+ + ++ L+DM + G + +A GI + + +
Sbjct: 308 QLGALDVGI-WIHRYIEKHSLSLNVALGTSLVDMYAKCGNISEALCVFHGI--QTRNSLT 364
Query: 383 WRTLLGACSFHGNV 396
+ ++G + HG+
Sbjct: 365 YTAIIGGLALHGDA 378
Score = 38.9 bits (89), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 70/171 (40%), Gaps = 14/171 (8%)
Query: 271 VERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGL---KPNRVTFLSVLNACSHGGLV 327
+E N SW I GF+ K+AV + +M + G +P+ T+ + C+ L
Sbjct: 38 IENPNAFSWNVTIRGFSESENPKDAVLAYKQMLRRGCCESRPDHFTYPVLFKVCADLRLN 97
Query: 328 EEGLNFFDKMVE-ECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTL 386
G + + E++ + + I M G +E A K P + D+V W L
Sbjct: 98 SLGHMILGHVFKLRLELVSHV--HNASIHMFASCGEMENARKVFDESP--VRDLVSWNCL 153
Query: 387 LGACSFHGNVEMGERVTR--KILEMERGYGGDYVLMYNILAGVGRFGDAER 435
+ + + GE+ K++E E G D V M +++ GD R
Sbjct: 154 ING---YKKIGEGEKAIEVYKVMESE-GVKPDDVTMIGLVSSCAMLGDLNR 200
>gi|242094598|ref|XP_002437789.1| hypothetical protein SORBIDRAFT_10g002620 [Sorghum bicolor]
gi|241916012|gb|EER89156.1| hypothetical protein SORBIDRAFT_10g002620 [Sorghum bicolor]
Length = 623
Score = 246 bits (627), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 152/452 (33%), Positives = 235/452 (51%), Gaps = 51/452 (11%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+NT+L Y+ A A L+ ++ P+ D+ +++ L+ T +
Sbjct: 139 WNTMLEAYAAAGRVGDACALFDRM------------PVRDAGSWNILLATLVRSGSVDKA 186
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWN--------- 144
+L + + V T +V+ G + ++ LFD MPERN+V+WN
Sbjct: 187 RELFGRMP----ERDVMAWTTMVDGVARSGKVDEARVLFDSMPERNVVSWNAMISGYTRN 242
Query: 145 ----------------------VMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYT 182
+M+TG ++ +L+ AR LF+EMP RNVV+WT +++GY
Sbjct: 243 HRIDEALDLFMKMPERDIASCNIMVTGFIQNKDLKRARELFDEMPERNVVTWTTMMNGYL 302
Query: 183 RMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFD 242
+ +S AL LF M+ T P+++T L L A + + +H K F FD
Sbjct: 303 KGKQSELALGLFSGMLMAG-TRPNQVTFLGALDACSDLAALCEGKQVHQMICKTTFQ-FD 360
Query: 243 IRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRM 302
V + L++ YAKCG I A KLF D+S E K+L+SW II+ +A HG+G EA+ + +M
Sbjct: 361 AFVESALMNVYAKCGEIGLARKLF-DLSRE-KDLISWNGIIAAYAHHGVGIEAILLYEKM 418
Query: 303 QKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGR 362
Q+ G +PN VT++ +L+ACSH GLV+EGL F+ MV + + +HY CLID+ RAGR
Sbjct: 419 QENGYRPNDVTYVVLLSACSHSGLVDEGLKIFESMVNDRSIAVRDEHYTCLIDLCSRAGR 478
Query: 363 LEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYN 422
L+ A++ + + VW LLG C+ HGN +G R +L+ E G Y L+ N
Sbjct: 479 LDDAKRLIHYLKIKPASGSVWSALLGGCNAHGNESIGNLAARNLLQAEPDNAGTYTLLSN 538
Query: 423 ILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
I A G++ +A +R M+ R K PGCS +
Sbjct: 539 IYASAGKWKEAAEIRSEMNNRGLKKQPGCSWI 570
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 146/290 (50%), Gaps = 17/290 (5%)
Query: 106 QSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEE 165
Q +V ++ Y + G + D+ LFD MP R+ +WN+++ LV+ G ++ AR LF
Sbjct: 133 QRNVVSWNTMLEAYAAAGRVGDACALFDRMPVRDAGSWNILLATLVRSGSVDKARELFGR 192
Query: 166 MPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDV-K 224
MP R+V++WT ++DG R + +EA LF M E + ++ A++ +N + +
Sbjct: 193 MPERDVMAWTTMVDGVARSGKVDEARVLFDSM-----PERNVVSWNAMISGYTRNHRIDE 247
Query: 225 SCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIIS 284
+ L E+ DI N ++ + + + A +LF+++ +N+V+WT++++
Sbjct: 248 ALDLFMKMPER------DIASCNIMVTGFIQNKDLKRARELFDEMP--ERNVVTWTTMMN 299
Query: 285 GFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVL 344
G+ + A+ F M G +PN+VTFL L+ACS + EG +M+ +
Sbjct: 300 GYLKGKQSELALGLFSGMLMAGTRPNQVTFLGALDACSDLAALCEGKQVH-QMICKTTFQ 358
Query: 345 PDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHG 394
D L+++ + G + A K L S D++ W ++ A + HG
Sbjct: 359 FDAFVESALMNVYAKCGEIGLARK--LFDLSREKDLISWNGIIAAYAHHG 406
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 104/192 (54%), Gaps = 15/192 (7%)
Query: 113 TALVNMYVSLGFLKDSSKLFDEMPE--RNLVTWNVMITGLVKWGELEFARSLFEEMPCRN 170
TALV+ Y G L+D+ +LFD P+ RN+VTW +++G + ++ A +LF+ MP RN
Sbjct: 77 TALVSAYARRGMLRDARELFDR-PDARRNVVTWTALLSGYARARLVDEAEALFQRMPQRN 135
Query: 171 VVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIH 230
VVSW +++ Y R +A ALF +M + IL L + ++G V + +
Sbjct: 136 VVSWNTMLEAYAAAGRVGDACALFDRM---PVRDAGSWNIL--LATLVRSGSVDKARELF 190
Query: 231 GYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHG 290
G +R D+ ++D A+ G + A LF+ S+ +N+VSW ++ISG+ +
Sbjct: 191 GRMPER-----DVMAWTTMVDGVARSGKVDEARVLFD--SMPERNVVSWNAMISGYTRNH 243
Query: 291 MGKEAVENFGRM 302
EA++ F +M
Sbjct: 244 RIDEALDLFMKM 255
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 82/307 (26%), Positives = 144/307 (46%), Gaps = 31/307 (10%)
Query: 83 TCATLSHPNLGTQLHAVISKVGF-QSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLV 141
A +S+ ++G A + VG QSH L+ + G + D+ KLFD P+ ++V
Sbjct: 21 AAAYVSYGSMG----AASAAVGLEQSHD--PNRLIAELAAAGRVWDARKLFDGTPDWDVV 74
Query: 142 TWNVMITGLVKWGELEFARSLFEEMPC-RNVVSWTGIIDGYTRMNRSNEALALFRKMVAC 200
+W +++ + G L AR LF+ RNVV+WT ++ GY R +EA ALF++M
Sbjct: 75 SWTALVSAYARRGMLRDARELFDRPDARRNVVTWTALLSGYARARLVDEAEALFQRMP-- 132
Query: 201 EYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIF 260
+ S T+L A + GD +C L D N L+ T + G +
Sbjct: 133 QRNVVSWNTMLEAYAAAGRVGD--ACALFD------RMPVRDAGSWNILLATLVRSGSVD 184
Query: 261 SASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNA 320
A +LF + +++++WT+++ G A G EA F M + N V++ ++++
Sbjct: 185 KARELFG--RMPERDVMAWTTMVDGVARSGKVDEARVLFDSMP----ERNVVSWNAMISG 238
Query: 321 CSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDV 380
+ ++E L+ F KM E DI ++ + L++A + +P +V
Sbjct: 239 YTRNHRIDEALDLFMKMPER-----DIASCNIMVTGFIQNKDLKRARELFDEMPER--NV 291
Query: 381 VVWRTLL 387
V W T++
Sbjct: 292 VTWTTMM 298
>gi|356534289|ref|XP_003535689.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g43790-like [Glycine max]
Length = 591
Score = 246 bits (627), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 165/482 (34%), Positives = 250/482 (51%), Gaps = 57/482 (11%)
Query: 3 ILQNSQTPNNITT--QIHSHLLTT---------NSLLHHSQLFNTLLHFYSLAESPQKAF 51
ILQ Q +N+ T Q+H+ +LTT + LL+ S F + F P
Sbjct: 8 ILQKLQKCHNLNTLKQVHAQMLTTGLSFQTYYLSHLLNTSSKFASTYAFTIFNHIPNPTL 67
Query: 52 LLYKQLQQIYTH----------------SHSPLPPLFDSFTYSFLIRTCATLSHPNL--G 93
LY L TH +H L P +SFT+ L + CA SHP L G
Sbjct: 68 FLYNTLISSLTHHSDQIHLAFSLYNHILTHKTLQP--NSFTFPSLFKACA--SHPWLQHG 123
Query: 94 TQLHA-VISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVK 152
LHA V+ + +V +L+N Y G L S LFD++ E +L TWN M+
Sbjct: 124 PPLHAHVLKFLQPPYDPFVQNSLLNFYAKYGKLCVSRYLFDQISEPDLATWNTMLAA--- 180
Query: 153 WGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILA 212
+A+S S + + S EAL LF M + +P+E+T++A
Sbjct: 181 -----YAQS----------ASHVSYSTSFEDADMSLEALHLFCDMQLSQ-IKPNEVTLVA 224
Query: 213 VLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVE 272
++ A G + HGY + + V L+D Y+KCGC+ A +LF+++S
Sbjct: 225 LISACSNLGALSQGAWAHGYVLRNNLK-LNRFVGTALVDMYSKCGCLNLACQLFDELS-- 281
Query: 273 RKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLN 332
++ + ++I GFA+HG G +A+E + M+ L P+ T + + ACSHGGLVEEGL
Sbjct: 282 DRDTFCYNAMIGGFAVHGHGNQALELYRNMKLEDLVPDGATIVVTMFACSHGGLVEEGLE 341
Query: 333 FFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSF 392
F+ M + P ++HYGCLID+LGRAGRL++AE+ +P + + ++WR+LLGA
Sbjct: 342 IFESMKGVHGMEPKLEHYGCLIDLLGRAGRLKEAEERLQDMPMK-PNAILWRSLLGAAKL 400
Query: 393 HGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCS 452
HGN+EMGE + ++E+E G+YVL+ N+ A +GR+ D +R+R +M + K+PG S
Sbjct: 401 HGNLEMGEAALKHLIELEPETSGNYVLLSNMYASIGRWNDVKRVRMLMKDHGVDKLPGFS 460
Query: 453 LV 454
LV
Sbjct: 461 LV 462
>gi|449527549|ref|XP_004170773.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 487
Score = 246 bits (627), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 148/420 (35%), Positives = 237/420 (56%), Gaps = 19/420 (4%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSH--P 90
++N+++ Y L+ P++A L Y L L + +T+ LI+ CA +
Sbjct: 77 MYNSMIRGYFLSRFPKQAILCYLDLMD--------RGFLANKYTFPPLIKACALVYRELK 128
Query: 91 NLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGL 150
+G +HA + +G+++ +V +ALV Y SL LK + LFD+ +++V W VM+ G
Sbjct: 129 RIGYLVHAHVIVLGYENDAFVVSALVEFY-SLFDLKVARVLFDKSSGKDVVVWTVMVDGY 187
Query: 151 VKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITI 210
K G++E AR LF+EMP RNV+SW+ ++ Y+R++ E L LFR+M + P++ I
Sbjct: 188 GKVGDIESARVLFDEMPERNVISWSAMMAAYSRVSDFREVLCLFRQMQK-KNIVPNDSVI 246
Query: 211 LAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDIS 270
++VL A G + +H Y ++ G + I + L+D Y+KCG I SA ++FE IS
Sbjct: 247 VSVLTACAHLGAITQGLWMHSYAKRYGLDSNPI-LATALVDMYSKCGYIESALEVFEGIS 305
Query: 271 VERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEG 330
K+ +W ++ISGFAM G +++E F +M G + TF+S+L AC+H +VE G
Sbjct: 306 --NKDAGAWNAMISGFAMTGNVVKSLELFDKMIASGTQATEATFVSILAACTHAKMVERG 363
Query: 331 LNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEK---TALGIPSEITDVVVWRTLL 387
L FFD+M V P +HY C++D++ RAG +E AEK +G S + D VW +L
Sbjct: 364 LEFFDQMYPVYRVQPQFEHYACVVDLMARAGMVEDAEKFVEEKMGGFSNV-DANVWGAIL 422
Query: 388 GACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFK 447
AC + N+E+G+R+ K+ + GG VL YNI + GR A+ +R+ E + K
Sbjct: 423 SACRQYRNIEIGDRIWTKLSALGLLDGGTQVLSYNIFSEAGREMAAKEVRKKFSEARSKK 482
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 116/280 (41%), Gaps = 53/280 (18%)
Query: 156 LEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALF-----RKMVACEYTEPSEITI 210
+A +F+ + RN+ + +I GY +A+ + R +A +YT P I
Sbjct: 60 FSYACGIFKNLQQRNIFMYNSMIRGYFLSRFPKQAILCYLDLMDRGFLANKYTFPPLIKA 119
Query: 211 LA----------------VLPAIWQNGDVKSCQLIHGYG---EKRGFTAF------DIRV 245
A V+ ++N L+ Y K F D+ V
Sbjct: 120 CALVYRELKRIGYLVHAHVIVLGYENDAFVVSALVEFYSLFDLKVARVLFDKSSGKDVVV 179
Query: 246 LNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKV 305
++D Y K G I SA LF+++ +N++SW+++++ ++ +E + F +MQK
Sbjct: 180 WTVMVDGYGKVGDIESARVLFDEMP--ERNVISWSAMMAAYSRVSDFREVLCLFRQMQKK 237
Query: 306 GLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYG---------CLIDM 356
+ PN +SVL AC+H G + +GL K YG L+DM
Sbjct: 238 NIVPNDSVIVSVLTACAHLGAITQGLWMHSYA----------KRYGLDSNPILATALVDM 287
Query: 357 LGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNV 396
+ G +E A + GI ++ D W ++ + GNV
Sbjct: 288 YSKCGYIESALEVFEGISNK--DAGAWNAMISGFAMTGNV 325
>gi|242049708|ref|XP_002462598.1| hypothetical protein SORBIDRAFT_02g028755 [Sorghum bicolor]
gi|241925975|gb|EER99119.1| hypothetical protein SORBIDRAFT_02g028755 [Sorghum bicolor]
Length = 655
Score = 246 bits (627), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 138/418 (33%), Positives = 228/418 (54%), Gaps = 12/418 (2%)
Query: 36 TLLHFYSLAESPQKAFLLYKQL-QQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLGT 94
TL+ Y A+ A Y Q+ ++ + H L L D L++ CA S G
Sbjct: 246 TLIDGYICADLISDAMKAYVQMVGEVGANDHEVL--LVD------LMKACARYSAITEGQ 297
Query: 95 QLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWG 154
QLH VI K GF +H +V LV+ Y G + + F + + +WN ++ L++ G
Sbjct: 298 QLHTVILKNGFDAHAFVQATLVHFYGCCGLIGLAQMAFKLSDKSHTASWNALLAALLRKG 357
Query: 155 ELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVL 214
+ AR LF++MP R+ VSW+ +I GY + RS+ AL LF M+ EP+E+T+ + L
Sbjct: 358 LIHEARELFDDMPERDTVSWSTMISGYVQTGRSDMALELFYSMLNTS-VEPNEVTLASAL 416
Query: 215 PAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERK 274
AI +G + + IH + R D + LID YAK G + A + F S +
Sbjct: 417 SAIADSGTLDQGKWIHDHIMNRPIQLTD-NLSAGLIDMYAKRGSVADAVQFFNCASDKFS 475
Query: 275 NLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFF 334
++ W ++I A+HG +++ F ++Q+ +KPN +TF+ VL+AC H G+V +G +F
Sbjct: 476 SVSPWNAMICSLAIHGYAHMSLDLFSQLQRTSIKPNSITFIGVLSACCHTGMVAKGKYYF 535
Query: 335 DKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHG 394
+ M E + P IKHYGC++D+LGRAG LE+AE+ +P + DVV+W ++L A G
Sbjct: 536 EAMTREYGIQPTIKHYGCMVDLLGRAGYLEEAEQLVSMMPMK-ADVVIWGSILSAARAQG 594
Query: 395 NVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCS 452
N+ +GE+ ++ ++++ +G V + NI A G + + +R+ + + N ++ G S
Sbjct: 595 NIALGEKAAEELAKLDQTHGASKVALSNIYADAGHWTNVSVVRKELQDENFERLVGRS 652
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 93/357 (26%), Positives = 150/357 (42%), Gaps = 35/357 (9%)
Query: 73 DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLF 132
+ T + I A P +H K V V T LV+ Y + L + +F
Sbjct: 143 NEVTLAGAIMAFARCGAPATVGMIHGFALKRALDGFVIVATNLVHAYAGVLELYSARAMF 202
Query: 133 DEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALA 192
D M RN VTWN M+ G VK ++ A +F +P R+ VSW +IDGY + ++A+
Sbjct: 203 DGMTHRNAVTWNAMLNGYVKAEMIDMAAEVFWRIPERDEVSWLTLIDGYICADLISDAMK 262
Query: 193 LFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDT 252
+ +MV E+ ++ ++ A + + Q +H K GF A V L+
Sbjct: 263 AYVQMVGEVGANDHEVLLVDLMKACARYSAITEGQQLHTVILKNGFDAHAF-VQATLVHF 321
Query: 253 YAKC-------------------------------GCIFSASKLFEDISVERKNLVSWTS 281
Y C G I A +LF+D+ ++ VSW++
Sbjct: 322 YGCCGLIGLAQMAFKLSDKSHTASWNALLAALLRKGLIHEARELFDDM--PERDTVSWST 379
Query: 282 IISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEEC 341
+ISG+ G A+E F M ++PN VT S L+A + G +++G D ++
Sbjct: 380 MISGYVQTGRSDMALELFYSMLNTSVEPNEVTLASALSAIADSGTLDQGKWIHDHIMNRP 439
Query: 342 EVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEM 398
L D G LIDM + G + A + + + V W ++ + + HG M
Sbjct: 440 IQLTDNLSAG-LIDMYAKRGSVADAVQFFNCASDKFSSVSPWNAMICSLAIHGYAHM 495
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 150/303 (49%), Gaps = 25/303 (8%)
Query: 66 SPLPPLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQS-HVYVNTALVNMYVSL-G 123
+PL P FL+ + + G QLHA+ +K G + + +V ++++ Y L
Sbjct: 6 NPLAP--------FLVASLKRAARLRCGEQLHALAAKSGLLACNAFVRNSVLSFYSRLPS 57
Query: 124 FLKDSSKLFDEMPE--RNLVTWNVMITGLVKWGELEFARSLFEEMP--CRNVVSWTGIID 179
L + +LFDE P R+ N ++ L + G L+ A+ L +EMP R+ VS+T ++
Sbjct: 58 SLASALQLFDETPAPLRDTAARNSVLAALTRAGHLDRAQRLLDEMPRVHRDAVSYTTLVT 117
Query: 180 GYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFT 239
R + A+A+FR M++ E P+E+T+ + A + G + +IHG+ KR
Sbjct: 118 ALARAGHAGRAVAVFRGMLS-ENVVPNEVTLAGAIMAFARCGAPATVGMIHGFALKRALD 176
Query: 240 AFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENF 299
F I N L+ YA ++SA +F+ ++ +N V+W ++++G+ M A E F
Sbjct: 177 GFVIVATN-LVHAYAGVLELYSARAMFDGMT--HRNAVTWNAMLNGYVKAEMIDMAAEVF 233
Query: 300 GRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGR 359
R+ + + V++L++++ L+ + + + +MV E H L+D++
Sbjct: 234 WRIP----ERDEVSWLTLIDGYICADLISDAMKAYVQMVGEVGA---NDHEVLLVDLMKA 286
Query: 360 AGR 362
R
Sbjct: 287 CAR 289
>gi|115455659|ref|NP_001051430.1| Os03g0775400 [Oryza sativa Japonica Group]
gi|24899461|gb|AAN65031.1| hypothetical protein [Oryza sativa Japonica Group]
gi|108711328|gb|ABF99123.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113549901|dbj|BAF13344.1| Os03g0775400 [Oryza sativa Japonica Group]
gi|215741536|dbj|BAG98031.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 804
Score = 246 bits (627), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 138/426 (32%), Positives = 229/426 (53%), Gaps = 23/426 (5%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+N ++ Y+ KA L+ ++ H S P D FT + ++ CA L + +G
Sbjct: 264 WNAMIAGYNQNGLDAKALKLFSRM----LHESSMAP---DEFTITSVLSACANLGNVRIG 316
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPER--NLVTWNVMITGLV 151
Q+HA I + + V AL++ Y G ++++ ++ D+ E N++++ ++ G V
Sbjct: 317 KQVHAYILRTEMAYNSQVTNALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYV 376
Query: 152 KWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITIL 211
K G++E AR +F M R+VV+WT +I GY + R++EA+ LFR M+ C EP+ T+
Sbjct: 377 KIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCG-PEPNSYTLA 435
Query: 212 AVLP-----AIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLF 266
AVL A G C+ I E+ V N +I YA+ G A ++F
Sbjct: 436 AVLSVCASLACLDYGKQIHCRAIRSLLEQSS------SVSNAIITMYARSGSFPWARRMF 489
Query: 267 EDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGL 326
+ + RK ++WTS+I A HG G+EAV F M + G++P+R+T++ VL+ACSH G
Sbjct: 490 DQV-CWRKETITWTSMIVALAQHGQGEEAVGLFEEMLRAGVEPDRITYVGVLSACSHAGF 548
Query: 327 VEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTL 386
V EG ++D++ E ++ P++ HY C++D+L RAG +A++ +P E D + W +L
Sbjct: 549 VNEGKRYYDQIKNEHQIAPEMSHYACMVDLLARAGLFSEAQEFIRRMPVE-PDAIAWGSL 607
Query: 387 LGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAF 446
L AC H N E+ E K+L ++ G Y + N+ + GR+ DA R+ + E+
Sbjct: 608 LSACRVHKNAELAELAAEKLLSIDPNNSGAYSAIANVYSACGRWSDAARIWKARKEKAVR 667
Query: 447 KVPGCS 452
K G S
Sbjct: 668 KETGFS 673
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 106/404 (26%), Positives = 189/404 (46%), Gaps = 46/404 (11%)
Query: 75 FTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDE 134
FT + ++ +CA +G ++H+ + K+G S V V +++NMY G + ++ +F+
Sbjct: 165 FTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETATTVFER 224
Query: 135 MPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALF 194
MP R++ +WN M++ G ++ A SLFE MP R++VSW +I GY + +AL LF
Sbjct: 225 MPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKALKLF 284
Query: 195 RKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYA 254
+M+ P E TI +VL A G+V+ + +H Y R A++ +V N LI TYA
Sbjct: 285 SRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAY-ILRTEMAYNSQVTNALISTYA 343
Query: 255 KCGCIFSASKLFE-----DISV--------------------------ERKNLVSWTSII 283
K G + +A ++ + D++V +++V+WT++I
Sbjct: 344 KSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMI 403
Query: 284 SGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNF----FDKMVE 339
G+ +G EA++ F M G +PN T +VL+ C+ ++ G ++E
Sbjct: 404 VGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLE 463
Query: 340 ECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMG 399
+ + + +I M R+G A + + + + W +++ A + HG G
Sbjct: 464 QSSSVSN-----AIITMYARSGSFPWARRMFDQVCWR-KETITWTSMIVALAQHGQ---G 514
Query: 400 ERVTRKILEMER-GYGGDYVLMYNILAGVGRFGDAERLRRVMDE 442
E EM R G D + +L+ G +R D+
Sbjct: 515 EEAVGLFEEMLRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQ 558
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 95/330 (28%), Positives = 162/330 (49%), Gaps = 43/330 (13%)
Query: 77 YSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVS----LGFLKDSSKLF 132
Y+ L++ C T ++P G +HA K G + Y+ L++ Y G L+D+ +LF
Sbjct: 29 YARLLQLCQTAANPGAGRAIHARAVKAGLLASAYLCNNLLSYYGETAGGAGGLRDARRLF 88
Query: 133 DEMP--ERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEA 190
DE+P RN+ TWN +++ K G L AR +F EMP R+ VSWT ++ G R R EA
Sbjct: 89 DEIPLARRNVFTWNSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEA 148
Query: 191 LALFRKMVACEYTEPSEITILAVLP--AIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNC 248
+ M A +T P++ T+ VL A+ Q G V + +H + K G + + V N
Sbjct: 149 IKTLLDMTADGFT-PTQFTLTNVLSSCAVTQAGAVG--RKVHSFVVKLGLGSC-VPVANS 204
Query: 249 LIDTYAKCGCIFSASKLFEDISVER-----------------------------KNLVSW 279
+++ Y KCG +A+ +FE + V +++VSW
Sbjct: 205 VLNMYGKCGDSETATTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSW 264
Query: 280 TSIISGFAMHGMGKEAVENFGRM-QKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMV 338
++I+G+ +G+ +A++ F RM + + P+ T SVL+AC++ G V G ++
Sbjct: 265 NAMIAGYNQNGLDAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYIL 324
Query: 339 EECEVLPDIKHYGCLIDMLGRAGRLEQAEK 368
E+ + + LI ++G +E A +
Sbjct: 325 -RTEMAYNSQVTNALISTYAKSGSVENARR 353
>gi|357436955|ref|XP_003588753.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355477801|gb|AES59004.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 600
Score = 246 bits (627), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 140/437 (32%), Positives = 243/437 (55%), Gaps = 43/437 (9%)
Query: 19 SHLLTTNSLLHHSQLFNTLLHFYSLA-ESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTY 77
SH +T + + + LFNTL+ YS +S +FL Y+ + + + +P + FT+
Sbjct: 77 SHTTSTPTPSYDAFLFNTLIRAYSQTRDSKSNSFLFYRTMLR---YGVTP-----NKFTF 128
Query: 78 SFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPE 137
F+++ CA + LG +H + K GF+ V+V L++MY LG +D
Sbjct: 129 PFVLKGCAGIGSLRLGKCVHGCVVKFGFEEDVHVLNTLIHMYCCLG--EDG--------- 177
Query: 138 RNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKM 197
EFA +F++ P + V+W+ +I G+ R+ S+ A+ LFR+M
Sbjct: 178 ------------------FEFAEKVFDDSPKMDTVTWSAMIAGFVRLGCSSRAVDLFREM 219
Query: 198 VACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCG 257
P EIT+++VL A G ++ + + Y EK+ + + N LID +AKCG
Sbjct: 220 QVMGVC-PDEITMVSVLSACADLGALELGKWVESYVEKKNIPK-SVELCNALIDMFAKCG 277
Query: 258 CIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSV 317
+ A KLF + + + +VSWTS+I+G AMHG G +AV F M + G+ P+ V F+ V
Sbjct: 278 NVDKAIKLFRQM--DSRTIVSWTSVIAGLAMHGRGLDAVSLFDEMVENGITPDDVAFIGV 335
Query: 318 LNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEI 377
L+ACSH GLV++G +F M ++P ++HYGC++D+L R G +++A + +P E
Sbjct: 336 LSACSHSGLVDKGRYYFGSMERNFSIVPKVEHYGCMVDLLCRGGFVKEAFEFVQKMPFE- 394
Query: 378 TDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLR 437
+ ++WRT++ AC G +++GE +++++++ E + +YVL+ NI A + ++ ++R
Sbjct: 395 PNQIIWRTIITACHATGELKLGESISKELIKSEPMHESNYVLLSNIYAKLRQWEKKTKVR 454
Query: 438 RVMDERNAFKVPGCSLV 454
+MD R KVPG +++
Sbjct: 455 EMMDMRGMKKVPGSTMI 471
>gi|449437638|ref|XP_004136598.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 564
Score = 246 bits (627), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 151/451 (33%), Positives = 249/451 (55%), Gaps = 60/451 (13%)
Query: 6 NSQTPNNITTQI-HSHLLTTNSLLH-HSQLFNTLLHFYSLAESPQKAFLLYKQLQQIYTH 63
N ++ QI H ++ + NSL+ +SQ+ ++L++ P L+K+L T
Sbjct: 39 NINYARSVFAQIPHPNIFSWNSLIKGYSQI-------HTLSKEP---IFLFKKL----TE 84
Query: 64 SHSPLPPLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLG 123
+ P+P +SFT +F+++ CA ++ G Q+H+ + K GF S ++V T+LVN Y
Sbjct: 85 TGYPVP---NSFTLAFVLKACAIVTAFGEGLQVHSHVLKDGFGSSLFVQTSLVNFYG--- 138
Query: 124 FLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTR 183
K E+ FAR +FEEMP RN+V+WT +I G+ R
Sbjct: 139 ----------------------------KCEEIGFARKVFEEMPVRNLVAWTAMISGHAR 170
Query: 184 MNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDI 243
+ +EA+ LFR+M +P +T+++V+ A G + +H Y EK F D+
Sbjct: 171 VGAVDEAMELFREMQKAG-IQPDAMTLVSVVSACAVAGALDIGYWLHAYIEKY-FVLTDL 228
Query: 244 RVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQ 303
+ L+D YAKCGCI A ++F + V K+ +W+S+I GFA HG+ ++A++ F +M
Sbjct: 229 ELSTALVDMYAKCGCIERAKQVFVHMPV--KDTTAWSSMIMGFAYHGLAQDAIDAFQQML 286
Query: 304 KVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRL 363
+ + P+ VTFL+VL+AC+HGGLV G F+ M+ E + P ++HYGC +D+L R+G +
Sbjct: 287 ETEVTPDHVTFLAVLSACAHGGLVSRGRRFWSLML-EFGIEPSVEHYGCKVDLLCRSGLV 345
Query: 364 EQAEK--TALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMY 421
E+A + T + IP + WR+LL C + +GE V R +LE+E +Y+++
Sbjct: 346 EEAYRITTTMKIPP---NAATWRSLLMGCKKKKLLNLGEIVARYLLELEPLNAENYIMIS 402
Query: 422 NILAGVGRFGDAERLRRVMDERNAFKVPGCS 452
N+ + + ++ LR+VM E+ VPGCS
Sbjct: 403 NLYSSLSQWEKMSELRKVMKEKCIKPVPGCS 433
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 93/304 (30%), Positives = 162/304 (53%), Gaps = 27/304 (8%)
Query: 145 VMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNR-SNEALALFRKMVACEYT 203
V L +G + +ARS+F ++P N+ SW +I GY++++ S E + LF+K+ Y
Sbjct: 29 VAFCALSPFGNINYARSVFAQIPHPNIFSWNSLIKGYSQIHTLSKEPIFLFKKLTETGYP 88
Query: 204 EPSEITILAVLPAIWQNGDVKSCQLIHGYGE---------KRGFTAFDIRVLNCLIDTYA 254
P+ T+ VL K+C ++ +GE K GF + + V L++ Y
Sbjct: 89 VPNSFTLAFVL---------KACAIVTAFGEGLQVHSHVLKDGFGS-SLFVQTSLVNFYG 138
Query: 255 KCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTF 314
KC I A K+FE++ V +NLV+WT++ISG A G EA+E F MQK G++P+ +T
Sbjct: 139 KCEEIGFARKVFEEMPV--RNLVAWTAMISGHARVGAVDEAMELFREMQKAGIQPDAMTL 196
Query: 315 LSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIP 374
+SV++AC+ G ++ G + +E+ VL D++ L+DM + G +E+A++ + +P
Sbjct: 197 VSVVSACAVAGALDIGY-WLHAYIEKYFVLTDLELSTALVDMYAKCGCIERAKQVFVHMP 255
Query: 375 SEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAE 434
+ D W +++ ++HG + +++LE E D+V +L+ G
Sbjct: 256 --VKDTTAWSSMIMGFAYHGLAQDAIDAFQQMLETE--VTPDHVTFLAVLSACAHGGLVS 311
Query: 435 RLRR 438
R RR
Sbjct: 312 RGRR 315
>gi|359486281|ref|XP_003633424.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g45350, chloroplastic-like [Vitis vinifera]
Length = 704
Score = 246 bits (627), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 158/520 (30%), Positives = 258/520 (49%), Gaps = 107/520 (20%)
Query: 30 HSQLFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSH 89
+S ++N ++ +S E P++ F+++ + + D F++S +++ C+ L
Sbjct: 80 NSFIWNAIIKSFSHKEDPREVFVIFNLMLESGV--------CVDKFSFSLVLKACSRLGL 131
Query: 90 PNLGTQLHAVISKVGFQSHVYVNT-------------------------------ALVNM 118
G Q+H ++ K+ S V++ ++++
Sbjct: 132 IKEGMQIHGLLGKMEIGSDVFLQNCLMCLYLRCGCLGIVRQLFDRMMKKDSVSFNSMIDG 191
Query: 119 YVSLGFLKDSSKLFD----------------------------------EMPERNLVTWN 144
YV G +K + +LFD EMP+++L++WN
Sbjct: 192 YVKHGMVKSAWELFDVMPMEQKILISWNSMISEYARSEERLKVAWELFEEMPKKDLISWN 251
Query: 145 VMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKM-----VA 199
MI G VK G++E LF MP R VVS +++G+ ++ + A LF +M ++
Sbjct: 252 SMINGCVKCGKMENDHHLFNRMPKRXVVSXANMVNGHAKLGEIDIARGLFVEMPEMDVIS 311
Query: 200 C-----EYTEPSEI--------------------TILAVLPAIWQNGDVKSCQLIHGYGE 234
C Y + + T+L L AI Q G +H Y E
Sbjct: 312 CNAMMARYVQNGYLMESLKNFHDMLSKELFLDNATLLITLSAIAQLGHFDEGVALHCYIE 371
Query: 235 KRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKE 294
GF+ + ++ LIDTYAKCG I +A +FEDI + K++ W +I+SG A+HG+G+
Sbjct: 372 DNGFSLSE-KLGVALIDTYAKCGSIDNALSVFEDI--DNKSIDHWNAILSGLAIHGLGEV 428
Query: 295 AVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLI 354
A E F M+K+ +KPN +TF+ VLNAC+H GLV+EGL F+ M +V P ++HY C++
Sbjct: 429 AFELFMEMEKLFVKPNDITFIGVLNACNHAGLVKEGLMCFELMKRVDKVEPKLQHYVCMV 488
Query: 355 DMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYG 414
D+LG+AG +E+ +K + E D VVWRTLL AC H N +GE V + ++ ++
Sbjct: 489 DILGQAGHVEETKKFVEKMSIEPND-VVWRTLLSACRNHENFTIGEPVAKHLISVDSYNL 547
Query: 415 GDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
YVL+ NI AG G + D R+R +M +R+ K+PGCS +
Sbjct: 548 SSYVLLSNIYAGFGIWNDVHRIRMMMKQRDLKKIPGCSQI 587
Score = 38.9 bits (89), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 46/92 (50%), Gaps = 1/92 (1%)
Query: 272 ERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGL 331
++ N W +II F+ +E F M + G+ ++ +F VL ACS GL++EG+
Sbjct: 77 KQDNSFIWNAIIKSFSHKEDPREVFVIFNLMLESGVCVDKFSFSLVLKACSRLGLIKEGM 136
Query: 332 NFFDKMVEECEVLPDIKHYGCLIDMLGRAGRL 363
++ + E+ D+ CL+ + R G L
Sbjct: 137 QIHG-LLGKMEIGSDVFLQNCLMCLYLRCGCL 167
>gi|414883628|tpg|DAA59642.1| TPA: hypothetical protein ZEAMMB73_113196, partial [Zea mays]
Length = 635
Score = 245 bits (626), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 130/366 (35%), Positives = 218/366 (59%), Gaps = 10/366 (2%)
Query: 92 LGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMP-ERNLVTWNVMITGL 150
+GT +HA+ K G +YV A ++ Y G + K+FDE+P R++VTWN ++ G
Sbjct: 150 MGTHVHALAVKAGAAGDLYVRNAQIHFYGVCGDVAAMRKVFDELPIVRDVVTWNAVLAGY 209
Query: 151 VKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITI 210
V+ G + AR +F+ MP R+ VSW+ +I GY + AL +F+ MVA + + +E I
Sbjct: 210 VRAGMVGVAREVFDGMPVRDEVSWSTVIGGYVKEGEPEVALGVFKNMVA-QGVKANEAAI 268
Query: 211 LAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDIS 270
+ L A Q G ++ + +H ++ G T + + LID Y+KCG + +A ++F+ +
Sbjct: 269 VTALSAAAQLGLLEQGKFVHEVVKRVGMT-MSVNLGAALIDMYSKCGSVAAAKEVFD--A 325
Query: 271 VERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEG 330
+ R+++ +W S+I G A HG+G +AV+ F + G P +TF+ VLNACS GLV+EG
Sbjct: 326 MPRRDVFAWNSMICGLATHGLGHDAVQLFEKFVSEGFCPTSITFVGVLNACSRTGLVDEG 385
Query: 331 LNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALG--IPSEITDVVVWRTLLG 388
+F M E+ ++ +++HYGC++D+L RAG +++A + G IP D V+W T+L
Sbjct: 386 RRYFKLMAEKYDIESEMEHYGCMVDLLSRAGLVQEAVELIEGMRIPP---DPVLWGTILS 442
Query: 389 ACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKV 448
AC HG V++G V K++E++ + G YVL+ +I A ++ + ++R++M R K
Sbjct: 443 ACKRHGLVDLGITVGNKLIELDPAHDGYYVLLASIYAKAKKWDEVRKVRKLMSNRGTSKS 502
Query: 449 PGCSLV 454
G SL+
Sbjct: 503 AGWSLM 508
>gi|414883627|tpg|DAA59641.1| TPA: hypothetical protein ZEAMMB73_113196 [Zea mays]
Length = 637
Score = 245 bits (626), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 130/366 (35%), Positives = 218/366 (59%), Gaps = 10/366 (2%)
Query: 92 LGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMP-ERNLVTWNVMITGL 150
+GT +HA+ K G +YV A ++ Y G + K+FDE+P R++VTWN ++ G
Sbjct: 150 MGTHVHALAVKAGAAGDLYVRNAQIHFYGVCGDVAAMRKVFDELPIVRDVVTWNAVLAGY 209
Query: 151 VKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITI 210
V+ G + AR +F+ MP R+ VSW+ +I GY + AL +F+ MVA + + +E I
Sbjct: 210 VRAGMVGVAREVFDGMPVRDEVSWSTVIGGYVKEGEPEVALGVFKNMVA-QGVKANEAAI 268
Query: 211 LAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDIS 270
+ L A Q G ++ + +H ++ G T + + LID Y+KCG + +A ++F+ +
Sbjct: 269 VTALSAAAQLGLLEQGKFVHEVVKRVGMT-MSVNLGAALIDMYSKCGSVAAAKEVFD--A 325
Query: 271 VERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEG 330
+ R+++ +W S+I G A HG+G +AV+ F + G P +TF+ VLNACS GLV+EG
Sbjct: 326 MPRRDVFAWNSMICGLATHGLGHDAVQLFEKFVSEGFCPTSITFVGVLNACSRTGLVDEG 385
Query: 331 LNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALG--IPSEITDVVVWRTLLG 388
+F M E+ ++ +++HYGC++D+L RAG +++A + G IP D V+W T+L
Sbjct: 386 RRYFKLMAEKYDIESEMEHYGCMVDLLSRAGLVQEAVELIEGMRIPP---DPVLWGTILS 442
Query: 389 ACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKV 448
AC HG V++G V K++E++ + G YVL+ +I A ++ + ++R++M R K
Sbjct: 443 ACKRHGLVDLGITVGNKLIELDPAHDGYYVLLASIYAKAKKWDEVRKVRKLMSNRGTSKS 502
Query: 449 PGCSLV 454
G SL+
Sbjct: 503 AGWSLM 508
>gi|15233584|ref|NP_193218.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274931|sp|O23337.1|PP311_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g14820
gi|2244839|emb|CAB10261.1| hypothetical protein [Arabidopsis thaliana]
gi|7268228|emb|CAB78524.1| hypothetical protein [Arabidopsis thaliana]
gi|332658106|gb|AEE83506.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 722
Score = 245 bits (626), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 134/421 (31%), Positives = 230/421 (54%), Gaps = 13/421 (3%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+NT++ Y +AF L+++++ S + P D ++ C +
Sbjct: 180 WNTMIERYCRFGLVDEAFKLFEEMKD------SNVMP--DEMILCNIVSACGRTGNMRYN 231
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
++ + + + ++ TALV MY G + + + F +M RNL M++G K
Sbjct: 232 RAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKC 291
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
G L+ A+ +F++ +++V WT +I Y + EAL +F +M C +P +++ +V
Sbjct: 292 GRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEM-CCSGIKPDVVSMFSV 350
Query: 214 LPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVER 273
+ A G + + +H G + ++ + N LI+ YAKCG + + +FE + R
Sbjct: 351 ISACANLGILDKAKWVHSCIHVNGLES-ELSINNALINMYAKCGGLDATRDVFEKMP--R 407
Query: 274 KNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNF 333
+N+VSW+S+I+ +MHG +A+ F RM++ ++PN VTF+ VL CSH GLVEEG
Sbjct: 408 RNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKI 467
Query: 334 FDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFH 393
F M +E + P ++HYGC++D+ GRA L +A + +P ++VV+W +L+ AC H
Sbjct: 468 FASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVA-SNVVIWGSLMSACRIH 526
Query: 394 GNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSL 453
G +E+G+ ++ILE+E + G VLM NI A R+ D +RRVM+E+N FK G S
Sbjct: 527 GELELGKFAAKRILELEPDHDGALVLMSNIYAREQRWEDVRNIRRVMEEKNVFKEKGLSR 586
Query: 454 V 454
+
Sbjct: 587 I 587
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 92/397 (23%), Positives = 169/397 (42%), Gaps = 81/397 (20%)
Query: 31 SQLFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHP 90
S +FN L S + P+ L Y++++ + D F++ +++ + +S
Sbjct: 76 SIVFNPFLRDLSRSSEPRATILFYQRIRHVGGR--------LDQFSFLPILKAVSKVSAL 127
Query: 91 NLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGL 150
G +LH V K+ +V T ++MY S G
Sbjct: 128 FEGMELHGVAFKIATLCDPFVETGFMDMYASCG--------------------------- 160
Query: 151 VKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITI 210
+ +AR++F+EM R+VV+W +I+ Y R +EA LF +M P E+ +
Sbjct: 161 ----RINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVM-PDEMIL 215
Query: 211 LAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDIS 270
++ A + G+++ + I+ + + D +L L+ YA GC+ A + F +S
Sbjct: 216 CNIVSACGRTGNMRYNRAIYEFLIEND-VRMDTHLLTALVTMYAGAGCMDMAREFFRKMS 274
Query: 271 V-----------------------------ERKNLVSWTSIISGFAMHGMGKEAVENFGR 301
V E+K+LV WT++IS + +EA+ F
Sbjct: 275 VRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEE 334
Query: 302 MQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEEC----EVLPDIKHYGCLIDML 357
M G+KP+ V+ SV++AC++ G++++ K V C + ++ LI+M
Sbjct: 335 MCCSGIKPDVVSMFSVISACANLGILDKA-----KWVHSCIHVNGLESELSINNALINMY 389
Query: 358 GRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHG 394
+ G L+ +P +VV W +++ A S HG
Sbjct: 390 AKCGGLDATRDVFEKMPRR--NVVSWSSMINALSMHG 424
>gi|449439631|ref|XP_004137589.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 555
Score = 245 bits (626), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 149/439 (33%), Positives = 241/439 (54%), Gaps = 28/439 (6%)
Query: 31 SQLFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHP 90
+ ++N ++ ++ +++ +K+ L+K++ + + FTYSFL+ C
Sbjct: 90 TTVWNQIIKGHTRSKTSKKSIELFKRMTLAGVEA--------NGFTYSFLLSACVRSRLF 141
Query: 91 NLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGF-----LKDSSKLFDEMPERNLVTWNV 145
G Q+H + G+ S++YV T L+N+Y + G LK + LFDEMP+ N+V WN
Sbjct: 142 REGEQIHGRVLVNGYWSNLYVRTNLINLYANGGDGGDFDLKRALYLFDEMPDSNVVGWNS 201
Query: 146 MITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEP 205
++ G V+ G+ + AR +F+EMP RNV +WT ++ G+ + + AL+LF +M E
Sbjct: 202 LLAGYVRRGDFDGARKVFDEMPERNVRTWTIMVAGFAQNGQCKLALSLFDQMRRAG-VEL 260
Query: 206 SEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVL----NCLIDTYAKCGCIFS 261
++ ++A L A + GD+ + IHGY E R + + + VL N LI YA CG +
Sbjct: 261 DQVALVAALSACAELGDLTLGKWIHGYVE-RTWRSRHLPVLVSLNNALIHMYASCGAMDL 319
Query: 262 ASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVG---LKPNRVTFLSVL 318
A KLFE+I ++N VSW+SII+GFA G G EA+ F M G ++P+ +TF+ L
Sbjct: 320 AYKLFEEIP--QRNTVSWSSIITGFAKQGCGVEAIRIFQLMLCSGQNEVRPDEITFIGAL 377
Query: 319 NACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEIT 378
ACSH GL+ +G+ F M + V+P I+HYGC++D+L RAG L +A +P +
Sbjct: 378 TACSHAGLISDGIRLFQSMHKTFGVIPQIEHYGCMVDLLSRAGLLTEALSLIESMPMKPN 437
Query: 379 DVVVWRTLLGACSFHGNVEMGERVTRKI---LEMERGYGGDYVLMYNILAGVGRFGDAER 435
+ VW LL C H N E+ V + + ++ G ++L+ N+ A GR+ D
Sbjct: 438 N-AVWGALLSGCRLHKNDEIVSHVAKHLSFEIDPNNQAAGYFMLLANVYAADGRWQDTAT 496
Query: 436 LRRVMDERNAFKVPGCSLV 454
+RR M + K G S +
Sbjct: 497 VRRNMHDIGVKKPSGRSWI 515
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 81/338 (23%), Positives = 154/338 (45%), Gaps = 38/338 (11%)
Query: 75 FTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDE 134
F +S L ++C +S NL + HA I GF Y+ L+++Y+S G L + K+F++
Sbjct: 29 FIFSVL-KSC--VSFRNL-AKTHAQIVVSGFSQKNYILNHLLSLYISFGSLGSAQKVFED 84
Query: 135 MPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALF 194
+ + WN +I G + + + LF+ M V + +G+T + L
Sbjct: 85 ITAPSTTVWNQIIKGHTRSKTSKKSIELFKRMTLAGVEA-----NGFTY------SFLLS 133
Query: 195 RKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGE---------KRGFTAFD--- 242
+ + + E +I ++ W N V++ LI+ Y KR FD
Sbjct: 134 ACVRSRLFREGEQIHGRVLVNGYWSNLYVRT-NLINLYANGGDGGDFDLKRALYLFDEMP 192
Query: 243 ---IRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENF 299
+ N L+ Y + G A K+F+++ +N+ +WT +++GFA +G K A+ F
Sbjct: 193 DSNVVGWNSLLAGYVRRGDFDGARKVFDEMP--ERNVRTWTIMVAGFAQNGQCKLALSLF 250
Query: 300 GRMQKVGLKPNRVTFLSVLNACSHGGLVEEG--LNFFDKMVEECEVLPD-IKHYGCLIDM 356
+M++ G++ ++V ++ L+AC+ G + G ++ + + LP + LI M
Sbjct: 251 DQMRRAGVELDQVALVAALSACAELGDLTLGKWIHGYVERTWRSRHLPVLVSLNNALIHM 310
Query: 357 LGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHG 394
G ++ A K IP + V W +++ + G
Sbjct: 311 YASCGAMDLAYKLFEEIPQR--NTVSWSSIITGFAKQG 346
>gi|359476124|ref|XP_002282605.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Vitis vinifera]
gi|296082021|emb|CBI21026.3| unnamed protein product [Vitis vinifera]
Length = 583
Score = 245 bits (626), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 137/430 (31%), Positives = 232/430 (53%), Gaps = 42/430 (9%)
Query: 25 NSLLHHSQLFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTC 84
++ ++ + LF+T++ Y+ + + + Y L Y SP + + + F+++ C
Sbjct: 67 DARVYDAFLFSTIIRAYAESSQSKHNAIFYYNLMLGY--GISP-----NKYAFPFVLKAC 119
Query: 85 ATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWN 144
A L NLG +H + K GF ++V +V+MY
Sbjct: 120 AGLRDLNLGKAVHGSLVKFGFDDDIFVQNTMVHMYCCCS--------------------- 158
Query: 145 VMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTE 204
G +EFAR LF+EMP + V+WT +I GY R+ +S A+ LFRKM
Sbjct: 159 ---------GGMEFARKLFDEMPKLDPVTWTAMIGGYARLGQSAGAVGLFRKMQIAGVC- 208
Query: 205 PSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASK 264
P ++T+++VL A G ++ + I Y EK + + N L+D +AKCG + A
Sbjct: 209 PDDVTMVSVLSACTDLGALELGKWIESYIEKERVLK-TVELSNALVDMFAKCGDVDKALG 267
Query: 265 LFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHG 324
LF ++S ++ +VSWTS+I G AMHG G EAV F M+ G+ P + F+ +L+ACSH
Sbjct: 268 LFRNMS--KRTIVSWTSVIVGLAMHGRGLEAVSLFEEMKASGMVPEDIAFIGLLSACSHS 325
Query: 325 GLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWR 384
GLVE G +F +M + ++P I+HYGC++D+L RAG + +A + +P E + ++WR
Sbjct: 326 GLVERGRQYFSEMTRQFGIVPKIEHYGCMVDLLSRAGLVTEALEFVERMPIE-PNPIIWR 384
Query: 385 TLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERN 444
TL+ AC HG +++GE ++++++ E + +YVL+ NI + + ++R M ++
Sbjct: 385 TLISACRVHGELKLGESISKQLIRNEPMHESNYVLLSNIYGKMLDWEKKSKIRVAMGKKG 444
Query: 445 AFKVPGCSLV 454
KVPG +++
Sbjct: 445 IQKVPGSTMI 454
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 86/318 (27%), Positives = 148/318 (46%), Gaps = 42/318 (13%)
Query: 80 LIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERN 139
+++ C TL P L QLH I K+GFQ++ V T F SS L D +P
Sbjct: 13 ILQACNTL--PKLA-QLHTHIIKLGFQNNPLVLTK---------FTSASSNL-DAIPYAM 59
Query: 140 LVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVA 199
+ ++V E+ + ++ II Y ++S + ++
Sbjct: 60 SLVFSV------------------EDARVYDAFLFSTIIRAYAESSQSKHNAIFYYNLML 101
Query: 200 CEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKC-GC 258
P++ VL A D+ + +HG K GF DI V N ++ Y C G
Sbjct: 102 GYGISPNKYAFPFVLKACAGLRDLNLGKAVHGSLVKFGFDD-DIFVQNTMVHMYCCCSGG 160
Query: 259 IFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVL 318
+ A KLF+++ + + V+WT++I G+A G AV F +MQ G+ P+ VT +SVL
Sbjct: 161 MEFARKLFDEMP--KLDPVTWTAMIGGYARLGQSAGAVGLFRKMQIAGVCPDDVTMVSVL 218
Query: 319 NACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEIT 378
+AC+ G +E G + + +E+ VL ++ L+DM + G +++ ALG+ ++
Sbjct: 219 SACTDLGALELG-KWIESYIEKERVLKTVELSNALVDMFAKCGDVDK----ALGLFRNMS 273
Query: 379 D--VVVWRTLLGACSFHG 394
+V W +++ + HG
Sbjct: 274 KRTIVSWTSVIVGLAMHG 291
>gi|345505228|gb|AEN99838.1| chlororespiratory reduction 4, partial [Matthiola incana]
Length = 584
Score = 245 bits (626), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 131/343 (38%), Positives = 204/343 (59%), Gaps = 6/343 (1%)
Query: 113 TALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVV 172
+L++ YV ++D+ LFD MP +++VTW MI G K G + A+ LF+EMP R+VV
Sbjct: 228 NSLIDGYVKHRRIEDAKSLFDLMPRKDVVTWATMIDGYAKLGFVHQAKKLFDEMPQRDVV 287
Query: 173 SWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGY 232
++ ++ GY + EA+ +F M + P E T++ VL AI Q G + IH Y
Sbjct: 288 AYNSMMAGYVQNKYHAEAIGIFNDMEKESHLSPDETTLVIVLSAIAQLGRLSKAVDIHLY 347
Query: 233 GEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMG 292
F ++ LIDTY+KCG I + ++FE+I E K++ W ++I G A+HG+G
Sbjct: 348 IMDNKFR-LGGKLGVALIDTYSKCGSIQKSMRVFEEI--ENKSIDHWNAMIGGLAIHGLG 404
Query: 293 KEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGC 352
+ A + +++K +KP+ +TF+ VLNACSH GLV+EGL F+ M + ++ P ++HYGC
Sbjct: 405 ESAFDMLLQIEKRSIKPDDITFIGVLNACSHSGLVKEGLLCFELMRRKHKIEPKLQHYGC 464
Query: 353 LIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERG 412
++D+L R+G +E A+ +P E D V+WRT L ACS H E GE V + + ++ G
Sbjct: 465 MVDILSRSGSIELAKNLIEEMPIEPND-VIWRTFLTACSNHKEFETGELVAKHLF-LQGG 522
Query: 413 YG-GDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
Y +VL+ N+ A G + + R+R M ER K+PGCS +
Sbjct: 523 YNPSSFVLLSNMYASFGMWKEVRRVRTTMKERKLRKIPGCSWI 565
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 102/398 (25%), Positives = 203/398 (51%), Gaps = 30/398 (7%)
Query: 18 HSHLLTTNSLLHHSQLFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTY 77
H + +++ S+ L+N ++ +S P+ A LL+ + + +S S D F+
Sbjct: 45 HEYHVSSYSVEEDPFLWNAVIKSFSHGVDPRNALLLFCLMIE---NSVS-----VDKFSI 96
Query: 78 SFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPE 137
S +++ C+ L + G Q+H + K G S +++ L+ +Y+ G L + ++FD MP+
Sbjct: 97 SLVLKACSRLGFVDFGMQVHGFLRKTGIYSDLFLQNCLIGLYLKCGCLGFARQVFDRMPQ 156
Query: 138 RNLVTWNVMITGLVKWGELEFARSLFEEMP--CRNVVSWTGIIDGYTRMNRS-NEALALF 194
R+ V++N MI G VK G +E AR LF+ MP +N++SW +I GYT+ N A LF
Sbjct: 157 RDSVSYNSMIDGYVKCGLIESARELFDLMPREKKNLISWNCMISGYTQSEDGVNVASKLF 216
Query: 195 RKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYA 254
+M E I+ +++ ++ ++ + + ++ D+ +ID YA
Sbjct: 217 DEM-----PEKDLISWNSLIDGYVKHRRIEDAKSLFDLMPRK-----DVVTWATMIDGYA 266
Query: 255 KCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVG-LKPNRVT 313
K G + A KLF+++ ++++V++ S+++G+ + EA+ F M+K L P+ T
Sbjct: 267 KLGFVHQAKKLFDEMP--QRDVVAYNSMMAGYVQNKYHAEAIGIFNDMEKESHLSPDETT 324
Query: 314 FLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGI 373
+ VL+A + G + + ++ +++ L K LID + G ++++ + I
Sbjct: 325 LVIVLSAIAQLGRLSKAVDIHLYIMDNKFRLGG-KLGVALIDTYSKCGSIQKSMRVFEEI 383
Query: 374 PSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMER 411
++ D W ++G + HG +GE +L++E+
Sbjct: 384 ENKSID--HWNAMIGGLAIHG---LGESAFDMLLQIEK 416
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/258 (20%), Positives = 100/258 (38%), Gaps = 46/258 (17%)
Query: 45 ESPQKAFLLYKQLQQIYTHS--HSPLPPLF-----------DSFTYSFLIRTCATLSHPN 91
E PQ+ + Y + Y + H+ +F D T ++ A L +
Sbjct: 280 EMPQRDVVAYNSMMAGYVQNKYHAEAIGIFNDMEKESHLSPDETTLVIVLSAIAQLGRLS 339
Query: 92 LGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLV 151
+H I F+ + AL++ Y G ++ S ++F+E+ +++ WN MI GL
Sbjct: 340 KAVDIHLYIMDNKFRLGGKLGVALIDTYSKCGSIQKSMRVFEEIENKSIDHWNAMIGGLA 399
Query: 152 KWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITIL 211
G E A + ++ R++ +P +IT +
Sbjct: 400 IHGLGESAFDMLLQIEKRSI--------------------------------KPDDITFI 427
Query: 212 AVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISV 271
VL A +G VK L ++ ++ C++D ++ G I A L E++ +
Sbjct: 428 GVLNACSHSGLVKEGLLCFELMRRKHKIEPKLQHYGCMVDILSRSGSIELAKNLIEEMPI 487
Query: 272 ERKNLVSWTSIISGFAMH 289
E N V W + ++ + H
Sbjct: 488 E-PNDVIWRTFLTACSNH 504
>gi|92870988|gb|ABE80149.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 766
Score = 245 bits (626), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 140/376 (37%), Positives = 206/376 (54%), Gaps = 34/376 (9%)
Query: 109 VYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPC 168
V+ TA+V+ YV G L ++ FDEMPE+N V++N MI G V+ +++ AR LFE MPC
Sbjct: 266 VFTWTAMVSGYVQNGMLDEAKTFFDEMPEKNEVSYNAMIAGYVQTKKMDIARELFESMPC 325
Query: 169 RNVVSWTGIIDGYTRMNRSNEALALFRKM----------VACEYTEPSEIT-ILAVLPAI 217
RN+ SW +I GY ++ +A F M + Y + L + I
Sbjct: 326 RNISSWNTMITGYGQIGDIAQARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEALNMFVEI 385
Query: 218 WQNG----------------DVKSCQL---IHGYGEKRGFTAFDIRVLNCLIDTYAKCGC 258
Q+G D+ + +L IHG K G+ V N L+ Y KCG
Sbjct: 386 KQDGESLNRATFGCALSTCADIAALELGKQIHGQAVKMGYGT-GCFVGNALLAMYFKCGS 444
Query: 259 IFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVL 318
I A+ FE I E K++VSW ++++G+A HG G++A+ F M+ G+KP+ +T + VL
Sbjct: 445 IDEANDTFEGI--EEKDVVSWNTMLAGYARHGFGRQALTVFESMKTAGVKPDEITMVGVL 502
Query: 319 NACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEIT 378
+ACSH GL++ G +F M ++ V+P KHY C+ID+LGRAGRLE+A+ +P +
Sbjct: 503 SACSHTGLLDRGTEYFYSMTKDYGVIPTSKHYTCMIDLLGRAGRLEEAQDLIRNMPFQ-P 561
Query: 379 DVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRR 438
W LLGA HGN E+GE+ + +ME G YVL+ N+ A GR+ DA+++R
Sbjct: 562 GAASWGALLGASRIHGNTELGEKAAEMVFKMEPQNSGMYVLLSNLYAASGRWVDADKMRS 621
Query: 439 VMDERNAFKVPGCSLV 454
M + KVPG S V
Sbjct: 622 KMRDIGVQKVPGYSWV 637
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 85/287 (29%), Positives = 138/287 (48%), Gaps = 29/287 (10%)
Query: 115 LVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSW 174
L+ +V L D+ LFD+MP R+ ++WN MI+G + G L AR LF+E P R+V +W
Sbjct: 210 LMGGFVRKKKLGDARWLFDKMPVRDAISWNTMISGYAQGGGLSQARRLFDESPTRDVFTW 269
Query: 175 TGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGE 234
T ++ GY + +EA F +M E +E++ A++ Q + + +
Sbjct: 270 TAMVSGYVQNGMLDEAKTFFDEM-----PEKNEVSYNAMIAGYVQTKKMDIARELF---- 320
Query: 235 KRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKE 294
+I N +I Y + G I A K F+ + +++ VSW +II+G+A G +E
Sbjct: 321 -ESMPCRNISSWNTMITGYGQIGDIAQARKFFD--MMPQRDCVSWAAIIAGYAQSGHYEE 377
Query: 295 AVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYG--- 351
A+ F +++ G NR TF L+ C+ +E G + V+ YG
Sbjct: 378 ALNMFVEIKQDGESLNRATFGCALSTCADIAALELGKQIHGQAVK--------MGYGTGC 429
Query: 352 ----CLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHG 394
L+ M + G +++A T GI E DVV W T+L + HG
Sbjct: 430 FVGNALLAMYFKCGSIDEANDTFEGI--EEKDVVSWNTMLAGYARHG 474
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/309 (27%), Positives = 145/309 (46%), Gaps = 55/309 (17%)
Query: 123 GFLKDSS-----KLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGI 177
G+L++S LFD+MPER+L +WNVM+TG V+ L AR LF+ MP ++VVSW +
Sbjct: 89 GYLRNSKFNLARNLFDQMPERDLFSWNVMLTGYVRNCRLGDARRLFDLMPEKDVVSWNSL 148
Query: 178 IDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDV-KSCQLIHGYGEKR 236
+ GY + +EA +F M E + I+ +L A NG + ++C L +
Sbjct: 149 LSGYAQNGYVDEAREVFDNM-----PEKNSISWNGLLAAYVHNGRIEEACLLFESKSD-- 201
Query: 237 GFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAV 296
+D+ NCL+ + + + A LF+ + V ++ +SW ++ISG+A G +A
Sbjct: 202 ----WDLISWNCLMGGFVRKKKLGDARWLFDKMPV--RDAISWNTMISGYAQGGGLSQAR 255
Query: 297 ENFGRMQKVGLKPNR--VTFLSVLNACSHGGLVEEGLNFFDKMVEECEV----------- 343
F P R T+ ++++ G+++E FFD+M E+ EV
Sbjct: 256 RLFDE------SPTRDVFTWTAMVSGYVQNGMLDEAKTFFDEMPEKNEVSYNAMIAGYVQ 309
Query: 344 -------------LP--DIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLG 388
+P +I + +I G+ G + QA K +P D V W ++
Sbjct: 310 TKKMDIARELFESMPCRNISSWNTMITGYGQIGDIAQARKFFDMMPQR--DCVSWAAIIA 367
Query: 389 ACSFHGNVE 397
+ G+ E
Sbjct: 368 GYAQSGHYE 376
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/232 (22%), Positives = 100/232 (43%), Gaps = 38/232 (16%)
Query: 76 TYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEM 135
T+ + TCA ++ LG Q+H K+G+ + +V AL+ MY G + +++ F+ +
Sbjct: 396 TFGCALSTCADIAALELGKQIHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTFEGI 455
Query: 136 PERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFR 195
E+++V+WN M+ G + G A ++FE M V
Sbjct: 456 EEKDVVSWNTMLAGYARHGFGRQALTVFESMKTAGV------------------------ 491
Query: 196 KMVACEYTEPSEITILAVLPAIWQNGDV-KSCQLIHGYGEKRGFTAFDIRVLNCLIDTYA 254
+P EIT++ VL A G + + + + + G + C+ID
Sbjct: 492 --------KPDEITMVGVLSACSHTGLLDRGTEYFYSMTKDYGVIPTS-KHYTCMIDLLG 542
Query: 255 KCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHG---MGKEAVENFGRMQ 303
+ G + A L ++ + SW +++ +HG +G++A E +M+
Sbjct: 543 RAGRLEEAQDLIRNMPFQ-PGAASWGALLGASRIHGNTELGEKAAEMVFKME 593
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 109/264 (41%), Gaps = 54/264 (20%)
Query: 139 NLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMV 198
+++ WN I+ ++ G + A +F MP R+ VS+ +I GY R ++ N A LF +M
Sbjct: 48 DILKWNKAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNLFDQM- 106
Query: 199 ACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGC 258
P D+ N ++ Y +
Sbjct: 107 ------PER----------------------------------DLFSWNVMLTGYVRNCR 126
Query: 259 IFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVL 318
+ A +LF+ + K++VSW S++SG+A +G EA E F M + N +++ +L
Sbjct: 127 LGDARRLFD--LMPEKDVVSWNSLLSGYAQNGYVDEAREVFDNMP----EKNSISWNGLL 180
Query: 319 NACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEIT 378
A H G +EE F E + D+ + CL+ R +L A +P +
Sbjct: 181 AAYVHNGRIEEACLLF-----ESKSDWDLISWNCLMGGFVRKKKLGDARWLFDKMP--VR 233
Query: 379 DVVVWRTLLGACSFHGNVEMGERV 402
D + W T++ + G + R+
Sbjct: 234 DAISWNTMISGYAQGGGLSQARRL 257
>gi|357118938|ref|XP_003561204.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35030,
mitochondrial-like [Brachypodium distachyon]
Length = 618
Score = 245 bits (626), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 131/342 (38%), Positives = 207/342 (60%), Gaps = 5/342 (1%)
Query: 113 TALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVV 172
A+++ Y + ++ LF +MP R++ +WN+MITG ++ LE A+ LF++MP RNVV
Sbjct: 226 NAMISGYARNHMIDEAHDLFMKMPTRDIASWNIMITGFIQNKNLERAQELFDKMPRRNVV 285
Query: 173 SWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGY 232
+WT +++GY + +S AL LF M+ + P+++T L + A + Q +H
Sbjct: 286 TWTTMMNGYLQSIQSETALQLFNGML-IDGIRPNQVTFLGAVDACSNLAGLSEGQQVHQM 344
Query: 233 GEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMG 292
K F FD + + L++ YAKCG I A K+F ++S E K+++SW +I+ +A HG+G
Sbjct: 345 ICKTPFQ-FDTFIESTLMNLYAKCGEIILARKVF-NLSKE-KDVISWNGMIAAYAHHGVG 401
Query: 293 KEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGC 352
EA+ + +MQ+ G KPN VT++ +L+ACSH GLV+EGL F+ MV++ + +HY C
Sbjct: 402 LEAIHLYEKMQENGYKPNDVTYVGLLSACSHSGLVDEGLRIFEYMVKDRSIAVRDEHYTC 461
Query: 353 LIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERG 412
LID+ RAGRL A++ + E + VW LLG C+ HGN +G+ R +LE E
Sbjct: 462 LIDLCSRAGRLGDAKRLIHFLKVEPSS-TVWNALLGGCNSHGNESIGDLAARNLLEAEPN 520
Query: 413 YGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
G Y L+ NI A G++ +A ++R M++R K PGCS +
Sbjct: 521 NAGTYTLLCNIYASAGKWKEAAKIRSEMNDRGLKKQPGCSWI 562
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/300 (27%), Positives = 153/300 (51%), Gaps = 16/300 (5%)
Query: 95 QLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWG 154
+ A+ ++ ++ V NT ++ Y S G + D+ LF+ MP R+ +WN+++ LV+ G
Sbjct: 116 EAEALFGRMPERNVVSWNT-MLEAYTSSGRVGDACTLFNGMPVRDAGSWNILLAALVRSG 174
Query: 155 ELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVL 214
++ AR LF+ MP RNV++WT ++ G R NEA ALF M E + ++ A++
Sbjct: 175 NIDKARKLFDRMPERNVMAWTTMVAGIARSGSVNEARALFDGM-----PERNVVSWNAMI 229
Query: 215 PAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERK 274
+N + + R DI N +I + + + A +LF+ + R+
Sbjct: 230 SGYARNHMIDEAHDLFMKMPTR-----DIASWNIMITGFIQNKNLERAQELFD--KMPRR 282
Query: 275 NLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFF 334
N+V+WT++++G+ + A++ F M G++PN+VTFL ++ACS+ + EG
Sbjct: 283 NVVTWTTMMNGYLQSIQSETALQLFNGMLIDGIRPNQVTFLGAVDACSNLAGLSEGQQVH 342
Query: 335 DKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHG 394
+M+ + D L+++ + G + A K + E DV+ W ++ A + HG
Sbjct: 343 -QMICKTPFQFDTFIESTLMNLYAKCGEIILARKV-FNLSKE-KDVISWNGMIAAYAHHG 399
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 140/289 (48%), Gaps = 26/289 (8%)
Query: 101 SKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFAR 160
+ V +HV V + G + D+ +LFD P+R++V+W ++ G L AR
Sbjct: 27 AAVDVSNHVQDPNRRVAELAAAGRVSDARRLFDRTPDRDVVSWTALVAAYACQGMLHDAR 86
Query: 161 SLFEEMPC-RNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQ 219
+LF+ RNVV+WT ++ GY R R +EA ALF +M E + ++ +L A
Sbjct: 87 ALFDRPDARRNVVTWTALLSGYARAGRVDEAEALFGRM-----PERNVVSWNTMLEAYTS 141
Query: 220 NGDV-KSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVS 278
+G V +C L +G + D N L+ + G I A KLF+ + +N+++
Sbjct: 142 SGRVGDACTLFNGMPVR------DAGSWNILLAALVRSGNIDKARKLFD--RMPERNVMA 193
Query: 279 WTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMV 338
WT++++G A G EA F M + N V++ ++++ + +++E + F KM
Sbjct: 194 WTTMVAGIARSGSVNEARALFDGMP----ERNVVSWNAMISGYARNHMIDEAHDLFMKMP 249
Query: 339 EECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLL 387
DI + +I + LE+A++ +P +VV W T++
Sbjct: 250 TR-----DIASWNIMITGFIQNKNLERAQELFDKMPRR--NVVTWTTMM 291
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 60/266 (22%), Positives = 111/266 (41%), Gaps = 36/266 (13%)
Query: 73 DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLF 132
+ T+ + C+ L+ + G Q+H +I K FQ ++ + L+N+Y G + + K+F
Sbjct: 318 NQVTFLGAVDACSNLAGLSEGQQVHQMICKTPFQFDTFIESTLMNLYAKCGEIILARKVF 377
Query: 133 DEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALA 192
+ E+++++WN G+I Y EA+
Sbjct: 378 NLSKEKDVISWN-------------------------------GMIAAYAHHGVGLEAIH 406
Query: 193 LFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDT 252
L+ KM Y +P+++T + +L A +G V I Y K A CLID
Sbjct: 407 LYEKMQENGY-KPNDVTYVGLLSACSHSGLVDEGLRIFEYMVKDRSIAVRDEHYTCLIDL 465
Query: 253 YAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRV 312
++ G + A +L + VE + V W +++ G H G E++ + + +PN
Sbjct: 466 CSRAGRLGDAKRLIHFLKVEPSSTV-WNALLGGCNSH--GNESIGDLAARNLLEAEPNNA 522
Query: 313 -TFLSVLNACSHGGLVEEGLNFFDKM 337
T+ + N + G +E +M
Sbjct: 523 GTYTLLCNIYASAGKWKEAAKIRSEM 548
>gi|255584555|ref|XP_002533004.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527215|gb|EEF29379.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 519
Score = 245 bits (626), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 129/387 (33%), Positives = 221/387 (57%), Gaps = 15/387 (3%)
Query: 73 DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLF 132
+ FT++ +I + L + LG QLHA K+G + V+V +A+++ Y L +++ F
Sbjct: 98 NEFTFATVIHSSTGLKNIYLGKQLHARTMKMGLNTIVFVGSAMLDFYAKLCSFEEARNAF 157
Query: 133 DEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALA 192
+++ + N+V++ +I G +K G+++ A LF+EMP RNVVSW ++ G+++M + EA++
Sbjct: 158 EDIQKPNVVSYTTLIHGYLKKGKIDDALQLFQEMPERNVVSWNAMVGGFSQMGHNEEAVS 217
Query: 193 LFRKMV-----ACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLN 247
LF +M+ + T P IT A + ++ +C + + D+ V N
Sbjct: 218 LFIEMLREGFMPNQSTFPCAITSAANMASLGMGKSFHACAV-------KSLCTSDVFVCN 270
Query: 248 CLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGL 307
L+ YAKCG + + +F ++ +N VSW ++I GFA +G G++AV F RM+ GL
Sbjct: 271 SLVSFYAKCGSMEDSLLVFNELP--DRNTVSWNAVICGFAQNGRGEDAVIFFERMRAAGL 328
Query: 308 KPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAE 367
+PN VT L +L AC+H GLVE+G +F++M +E + +HY C++D+L R GRL++A
Sbjct: 329 RPNSVTLLGLLCACNHAGLVEKGYMYFNQMRQEEPGILKPEHYACMVDLLSRFGRLKEAA 388
Query: 368 KTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGV 427
K +P + W+ LLG C H N E+ + +KIL ++ YV++ N +
Sbjct: 389 KFLHDLPFD-PGTGFWKALLGGCHIHSNAELSDLAAQKILALDPEDVSSYVMLSNAYSAA 447
Query: 428 GRFGDAERLRRVMDERNAFKVPGCSLV 454
GR+ +RR M E+ ++PGCS +
Sbjct: 448 GRWQQVSTIRREMKEKGLKRIPGCSWI 474
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 116/238 (48%), Gaps = 11/238 (4%)
Query: 162 LFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNG 221
LF+EMP +V+S T +I + R +R EA+ LF +M+ +P+E T V+ +
Sbjct: 55 LFDEMPELDVLSVTTLIGRFARQHRYEEAMCLFSRMLLLN-IKPNEFTFATVIHSSTGLK 113
Query: 222 DVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTS 281
++ + +H K G + V + ++D YAK A FEDI ++ N+VS+T+
Sbjct: 114 NIYLGKQLHARTMKMGLNTI-VFVGSAMLDFYAKLCSFEEARNAFEDI--QKPNVVSYTT 170
Query: 282 IISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEEC 341
+I G+ G +A++ F M + N V++ +++ S G EE ++ F +M+ E
Sbjct: 171 LIHGYLKKGKIDDALQLFQEMP----ERNVVSWNAMVGGFSQMGHNEEAVSLFIEMLRE- 225
Query: 342 EVLPDIKHYGCLIDMLGRAGRLEQAEK-TALGIPSEIT-DVVVWRTLLGACSFHGNVE 397
+P+ + C I L + A + S T DV V +L+ + G++E
Sbjct: 226 GFMPNQSTFPCAITSAANMASLGMGKSFHACAVKSLCTSDVFVCNSLVSFYAKCGSME 283
>gi|357521591|ref|XP_003631084.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525106|gb|AET05560.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 980
Score = 245 bits (626), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 140/376 (37%), Positives = 206/376 (54%), Gaps = 34/376 (9%)
Query: 109 VYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPC 168
V+ TA+V+ YV G L ++ FDEMPE+N V++N MI G V+ +++ AR LFE MPC
Sbjct: 266 VFTWTAMVSGYVQNGMLDEAKTFFDEMPEKNEVSYNAMIAGYVQTKKMDIARELFESMPC 325
Query: 169 RNVVSWTGIIDGYTRMNRSNEALALFRKM----------VACEYTEPSEIT-ILAVLPAI 217
RN+ SW +I GY ++ +A F M + Y + L + I
Sbjct: 326 RNISSWNTMITGYGQIGDIAQARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEALNMFVEI 385
Query: 218 WQNG----------------DVKSCQL---IHGYGEKRGFTAFDIRVLNCLIDTYAKCGC 258
Q+G D+ + +L IHG K G+ V N L+ Y KCG
Sbjct: 386 KQDGESLNRATFGCALSTCADIAALELGKQIHGQAVKMGYGT-GCFVGNALLAMYFKCGS 444
Query: 259 IFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVL 318
I A+ FE I E K++VSW ++++G+A HG G++A+ F M+ G+KP+ +T + VL
Sbjct: 445 IDEANDTFEGI--EEKDVVSWNTMLAGYARHGFGRQALTVFESMKTAGVKPDEITMVGVL 502
Query: 319 NACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEIT 378
+ACSH GL++ G +F M ++ V+P KHY C+ID+LGRAGRLE+A+ +P +
Sbjct: 503 SACSHTGLLDRGTEYFYSMTKDYGVIPTSKHYTCMIDLLGRAGRLEEAQDLIRNMPFQ-P 561
Query: 379 DVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRR 438
W LLGA HGN E+GE+ + +ME G YVL+ N+ A GR+ DA+++R
Sbjct: 562 GAASWGALLGASRIHGNTELGEKAAEMVFKMEPQNSGMYVLLSNLYAASGRWVDADKMRS 621
Query: 439 VMDERNAFKVPGCSLV 454
M + KVPG S V
Sbjct: 622 KMRDIGVQKVPGYSWV 637
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 85/287 (29%), Positives = 138/287 (48%), Gaps = 29/287 (10%)
Query: 115 LVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSW 174
L+ +V L D+ LFD+MP R+ ++WN MI+G + G L AR LF+E P R+V +W
Sbjct: 210 LMGGFVRKKKLGDARWLFDKMPVRDAISWNTMISGYAQGGGLSQARRLFDESPTRDVFTW 269
Query: 175 TGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGE 234
T ++ GY + +EA F +M E +E++ A++ Q + + +
Sbjct: 270 TAMVSGYVQNGMLDEAKTFFDEM-----PEKNEVSYNAMIAGYVQTKKMDIARELF---- 320
Query: 235 KRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKE 294
+I N +I Y + G I A K F+ + +++ VSW +II+G+A G +E
Sbjct: 321 -ESMPCRNISSWNTMITGYGQIGDIAQARKFFD--MMPQRDCVSWAAIIAGYAQSGHYEE 377
Query: 295 AVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYG--- 351
A+ F +++ G NR TF L+ C+ +E G + V+ YG
Sbjct: 378 ALNMFVEIKQDGESLNRATFGCALSTCADIAALELGKQIHGQAVK--------MGYGTGC 429
Query: 352 ----CLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHG 394
L+ M + G +++A T GI E DVV W T+L + HG
Sbjct: 430 FVGNALLAMYFKCGSIDEANDTFEGI--EEKDVVSWNTMLAGYARHG 474
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/309 (27%), Positives = 145/309 (46%), Gaps = 55/309 (17%)
Query: 123 GFLKDSS-----KLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGI 177
G+L++S LFD+MPER+L +WNVM+TG V+ L AR LF+ MP ++VVSW +
Sbjct: 89 GYLRNSKFNLARNLFDQMPERDLFSWNVMLTGYVRNCRLGDARRLFDLMPEKDVVSWNSL 148
Query: 178 IDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDV-KSCQLIHGYGEKR 236
+ GY + +EA +F M E + I+ +L A NG + ++C L +
Sbjct: 149 LSGYAQNGYVDEAREVFDNM-----PEKNSISWNGLLAAYVHNGRIEEACLLFESKSD-- 201
Query: 237 GFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAV 296
+D+ NCL+ + + + A LF+ + V ++ +SW ++ISG+A G +A
Sbjct: 202 ----WDLISWNCLMGGFVRKKKLGDARWLFDKMPV--RDAISWNTMISGYAQGGGLSQAR 255
Query: 297 ENFGRMQKVGLKPNR--VTFLSVLNACSHGGLVEEGLNFFDKMVEECEV----------- 343
F P R T+ ++++ G+++E FFD+M E+ EV
Sbjct: 256 RLFDE------SPTRDVFTWTAMVSGYVQNGMLDEAKTFFDEMPEKNEVSYNAMIAGYVQ 309
Query: 344 -------------LP--DIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLG 388
+P +I + +I G+ G + QA K +P D V W ++
Sbjct: 310 TKKMDIARELFESMPCRNISSWNTMITGYGQIGDIAQARKFFDMMPQR--DCVSWAAIIA 367
Query: 389 ACSFHGNVE 397
+ G+ E
Sbjct: 368 GYAQSGHYE 376
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/232 (22%), Positives = 100/232 (43%), Gaps = 38/232 (16%)
Query: 76 TYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEM 135
T+ + TCA ++ LG Q+H K+G+ + +V AL+ MY G + +++ F+ +
Sbjct: 396 TFGCALSTCADIAALELGKQIHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTFEGI 455
Query: 136 PERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFR 195
E+++V+WN M+ G + G A ++FE M V
Sbjct: 456 EEKDVVSWNTMLAGYARHGFGRQALTVFESMKTAGV------------------------ 491
Query: 196 KMVACEYTEPSEITILAVLPAIWQNGDV-KSCQLIHGYGEKRGFTAFDIRVLNCLIDTYA 254
+P EIT++ VL A G + + + + + G + C+ID
Sbjct: 492 --------KPDEITMVGVLSACSHTGLLDRGTEYFYSMTKDYGVIPTS-KHYTCMIDLLG 542
Query: 255 KCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHG---MGKEAVENFGRMQ 303
+ G + A L ++ + SW +++ +HG +G++A E +M+
Sbjct: 543 RAGRLEEAQDLIRNMPFQ-PGAASWGALLGASRIHGNTELGEKAAEMVFKME 593
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 109/264 (41%), Gaps = 54/264 (20%)
Query: 139 NLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMV 198
+++ WN I+ ++ G + A +F MP R+ VS+ +I GY R ++ N A LF +M
Sbjct: 48 DILKWNKAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNLFDQM- 106
Query: 199 ACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGC 258
P D+ N ++ Y +
Sbjct: 107 ------PER----------------------------------DLFSWNVMLTGYVRNCR 126
Query: 259 IFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVL 318
+ A +LF+ + K++VSW S++SG+A +G EA E F M + N +++ +L
Sbjct: 127 LGDARRLFD--LMPEKDVVSWNSLLSGYAQNGYVDEAREVFDNMP----EKNSISWNGLL 180
Query: 319 NACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEIT 378
A H G +EE F E + D+ + CL+ R +L A +P +
Sbjct: 181 AAYVHNGRIEEACLLF-----ESKSDWDLISWNCLMGGFVRKKKLGDARWLFDKMP--VR 233
Query: 379 DVVVWRTLLGACSFHGNVEMGERV 402
D + W T++ + G + R+
Sbjct: 234 DAISWNTMISGYAQGGGLSQARRL 257
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 42/85 (49%), Gaps = 18/85 (21%)
Query: 325 GLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWR 384
GL++ G +F M EE V P KHY C+ID+LGR RLE+
Sbjct: 778 GLLDTGAEYFYPMNEEYSVTPTSKHYTCMIDLLGRVDRLEEG------------------ 819
Query: 385 TLLGACSFHGNVEMGERVTRKILEM 409
LLGA HGN E+GE+ + +M
Sbjct: 820 ALLGASRIHGNTELGEKAAQMFFKM 844
>gi|224131262|ref|XP_002328495.1| predicted protein [Populus trichocarpa]
gi|222838210|gb|EEE76575.1| predicted protein [Populus trichocarpa]
Length = 580
Score = 245 bits (626), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 133/384 (34%), Positives = 222/384 (57%), Gaps = 9/384 (2%)
Query: 73 DSFTYSFLIRTCATLSHPNLGTQLHAVIS--KVGFQSHVYVNTALVNMYVSLGFLKDSSK 130
D FT L+ +C L + G +H + K S++ + AL++MYV ++ + +
Sbjct: 163 DEFTILGLLVSCGQLGNVKFGKAVHGWMERRKPTISSNLILGNALLDMYVKCQKVELALR 222
Query: 131 LFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEA 190
F + E+++V+WN+++ G K GELE AR F +MPCR++VSW ++ GY
Sbjct: 223 TFGALKEKDIVSWNMIVAGCAKVGELEQARLFFYQMPCRDIVSWNSLVTGYACRGDFASV 282
Query: 191 LALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLI 250
L MV E P +T+++++ A ++G + + HG+ R D + + LI
Sbjct: 283 KELIVDMVM-EKVIPDTVTMISLVSAATESGALDQGRWAHGW-VIRMQIKLDAFLGSALI 340
Query: 251 DTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPN 310
D Y KCG I AS++F++I+ +K++ WT++I+G A HG G +A+E F MQ+ + P+
Sbjct: 341 DMYCKCGSIERASRVFKEIN--KKDVTVWTTMITGLAFHGYGSKALELFSEMQE-DVSPD 397
Query: 311 RVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTA 370
VTF+SVL+ACSH GLV++G+ F M + + P ++HYGCL+D+L R+GRL +A+
Sbjct: 398 DVTFVSVLSACSHSGLVDQGIKVFSSMTDY-GIEPGVEHYGCLVDLLARSGRLSEAKDII 456
Query: 371 LGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRF 430
+P + + +W +L AC G+VE+ E +R++L ++ G Y L+ NI A GR+
Sbjct: 457 DQMPMKPSR-SIWGAMLNACQAQGDVELAEIASRELLNLDPEEEGGYTLLSNIYAASGRW 515
Query: 431 GDAERLRRVMDERNAFKVPGCSLV 454
++++R M+ R K GCS V
Sbjct: 516 SYSKKIRETMESRGVKKTAGCSSV 539
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 90/338 (26%), Positives = 154/338 (45%), Gaps = 38/338 (11%)
Query: 144 NVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYT 203
N +I ++ G + A +FE+MP ++VS+ +I GY + EA+ LF +MV
Sbjct: 102 NTLIKVYLENGLVRLAHQVFEKMPSPDIVSFNVMIVGYAKKGFGLEAMRLFHEMVGLGL- 160
Query: 204 EPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVL-NCLIDTYAKCGCIFSA 262
EP E TIL +L + Q G+VK + +HG+ E+R T +L N L+D Y KC + A
Sbjct: 161 EPDEFTILGLLVSCGQLGNVKFGKAVHGWMERRKPTISSNLILGNALLDMYVKCQKVELA 220
Query: 263 SKLF-----EDI------------------------SVERKNLVSWTSIISGFAMHGMGK 293
+ F +DI + +++VSW S+++G+A G
Sbjct: 221 LRTFGALKEKDIVSWNMIVAGCAKVGELEQARLFFYQMPCRDIVSWNSLVTGYACRGDFA 280
Query: 294 EAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCL 353
E M + P+ VT +S+++A + G +++G + V ++ D L
Sbjct: 281 SVKELIVDMVMEKVIPDTVTMISLVSAATESGALDQG-RWAHGWVIRMQIKLDAFLGSAL 339
Query: 354 IDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGY 413
IDM + G +E+A + I + DV VW T++ +FHG G + EM+
Sbjct: 340 IDMYCKCGSIERASRVFKEINKK--DVTVWTTMITGLAFHG---YGSKALELFSEMQEDV 394
Query: 414 GGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKV-PG 450
D V ++L+ G ++ +V + + PG
Sbjct: 395 SPDDVTFVSVLSACSHSGLVDQGIKVFSSMTDYGIEPG 432
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 113/244 (46%), Gaps = 12/244 (4%)
Query: 156 LEFARSLFEEM-PCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVL 214
L+ A +LF P N+ + +I ++ + + E+ L+ +++ P + T+L +L
Sbjct: 16 LDLAITLFNHFTPNPNLFIYNTLISAFSSLKKI-ESFYLYNVLLSSGEC-PDKQTLLYLL 73
Query: 215 PAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERK 274
A+ VK IH G +F + N LI Y + G + A ++FE +
Sbjct: 74 QAVNFISQVKQ---IHCQAIVTGLFSFG-YLQNTLIKVYLENGLVRLAHQVFEKMP--SP 127
Query: 275 NLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFF 334
++VS+ +I G+A G G EA+ F M +GL+P+ T L +L +C G V+ G
Sbjct: 128 DIVSFNVMIVGYAKKGFGLEAMRLFHEMVGLGLEPDEFTILGLLVSCGQLGNVKFGKAVH 187
Query: 335 DKMVEECEVLPDIKHYG-CLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFH 393
M + G L+DM + ++E A +T G E D+V W ++ C+
Sbjct: 188 GWMERRKPTISSNLILGNALLDMYVKCQKVELALRT-FGALKE-KDIVSWNMIVAGCAKV 245
Query: 394 GNVE 397
G +E
Sbjct: 246 GELE 249
>gi|296083798|emb|CBI24015.3| unnamed protein product [Vitis vinifera]
Length = 569
Score = 245 bits (626), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 149/442 (33%), Positives = 236/442 (53%), Gaps = 42/442 (9%)
Query: 16 QIHSHLLTTNSLLHHSQLFNTLLHFYSLAESPQKAFLLYKQLQQIYTHS-HSPLPPLFDS 74
Q HS ++ L + ++ F ++++S + L + +Y+ H + P +
Sbjct: 38 QYHSQIIRLG-LSADNDAMGRVIKFCAISKSGYLRWQLARNCIFMYSRMLHKSVSP--NK 94
Query: 75 FTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDE 134
FTY LIR C G Q+HA + K GF + + L++MYV+
Sbjct: 95 FTYPPLIRACCIDYAIEEGKQIHAHVLKFGFGADGFSLNNLIHMYVN------------- 141
Query: 135 MPERNLVTWNVMITGLVKWGELEFARSLFEEMPCR--NVVSWTGIIDGYTRMNRSNEALA 192
+ LE AR +F+ MP R N VSW +I Y + NR +EA A
Sbjct: 142 ------------------FQSLEQARRVFDNMPQRDRNSVSWNAMIAAYVQSNRLHEAFA 183
Query: 193 LFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDT 252
LF +M E + ++L A G ++ + IHGY EK G D ++ +ID
Sbjct: 184 LFDRM-RLENVVLDKFVAASMLSACTGLGALEQGKWIHGYIEKSGIE-LDSKLATTVIDM 241
Query: 253 YAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRV 312
Y KCGC+ AS++F ++ +K + SW +I G AMHG G+ A+E F M++ + P+ +
Sbjct: 242 YCKCGCLEKASEVFNELP--QKGISSWNCMIGGLAMHGKGEAAIELFKEMEREMVAPDGI 299
Query: 313 TFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALG 372
TF++VL+AC+H GLVEEG ++F M E + P ++H+GC++D+LGRAG LE+A K
Sbjct: 300 TFVNVLSACAHSGLVEEGKHYFQYMTEVLGLKPGMEHFGCMVDLLGRAGLLEEARKLINE 359
Query: 373 IPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGD 432
+P D V L+GAC HGN E+GE++ +K++E+E G YVL+ N+ A GR+ D
Sbjct: 360 MPVN-PDAGVLGALVGACRIHGNTELGEQIGKKVIELEPHNSGRYVLLANLYASAGRWED 418
Query: 433 AERLRRVMDERNAFKVPGCSLV 454
++R++M++R K PG S++
Sbjct: 419 VAKVRKLMNDRGVKKAPGFSMI 440
>gi|357141789|ref|XP_003572348.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350,
chloroplastic-like [Brachypodium distachyon]
Length = 555
Score = 245 bits (625), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 136/384 (35%), Positives = 219/384 (57%), Gaps = 6/384 (1%)
Query: 70 PLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSS 129
P + ++S ++ A ++ ++ + +G +V +++ + G L +
Sbjct: 173 PQRNGVSWSAMVGAYAGAGELDVAREMFDEMPAIG--RNVVSWNSMITGFARHGLLPLAR 230
Query: 130 KLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNE 189
K+FDEMP RNLV+WN M+ G GE+ AR LF+ MP ++VVSWT +I GY + E
Sbjct: 231 KMFDEMPVRNLVSWNTMVRGYAVNGEMNDARELFDRMPEKDVVSWTCMISGYAQARCYTE 290
Query: 190 ALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFT-AFDIRVLNC 248
L LFR M + P+E+T+++VL A ++ + H + +K + +
Sbjct: 291 TLELFRAMQSESNVLPNEVTMVSVLSACAHLTALEEGRWAHAFIDKHKMVLDSEFNLGAA 350
Query: 249 LIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLK 308
LID Y+KCG A K+F S+++KN+ +W ++I+G A++G + +++ F +M++ G K
Sbjct: 351 LIDMYSKCGRTDLAVKIFH--SLDQKNVSAWNALITGLAVNGDVRSSIDVFEQMRRSGEK 408
Query: 309 PNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEK 368
PN +TF+ VL AC+HGGLV+EG F M C V P+ KHYGC++DMLGRAG LE+AE+
Sbjct: 409 PNGITFVGVLTACAHGGLVDEGRRCFQSMASTCGVQPEAKHYGCMVDMLGRAGLLEEAEE 468
Query: 369 TALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVG 428
+P + DV++ LLGAC H V++ RV +IL + G +VL+ +I A G
Sbjct: 469 LIRSMPM-VPDVMILGALLGACRMHKRVDVAARVQNEILGLSTQQSGCHVLISDIYAAAG 527
Query: 429 RFGDAERLRRVMDERNAFKVPGCS 452
++ DA R V+ + K+ G S
Sbjct: 528 KWADALYARGVLQKFGISKLRGSS 551
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 117/383 (30%), Positives = 180/383 (46%), Gaps = 52/383 (13%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATL-SHPN 91
L N L+ + + SP+ AF + I +P D FT+ L+++ + L S P
Sbjct: 45 LHNLLIRASATSPSPRLAFAAFSS---ILRSGDTP-----DRFTFPSLLKSASRLASFPR 96
Query: 92 LGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPE-RNLVTWNVMITGL 150
G Q+HA + G V+V L+ MY + + ++FD +LVTWN M+ G
Sbjct: 97 TGAQVHAQAVRRGLLVDVFVVNTLLAMYAAFRDTRSMREVFDSCAGVADLVTWNTMLGGY 156
Query: 151 VKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITI 210
VK GE+ AR +FE+MP RN VSW+ ++ Y + A +F +M
Sbjct: 157 VKCGEIGEARRVFEQMPQRNGVSWSAMVGAYAGAGELDVAREMFDEM------------- 203
Query: 211 LAVLPAIWQNGDVKSCQLIHGYGE-------KRGFTAFDIRVL---NCLIDTYAKCGCIF 260
PAI +N V +I G+ ++ F +R L N ++ YA G +
Sbjct: 204 ----PAIGRN-VVSWNSMITGFARHGLLPLARKMFDEMPVRNLVSWNTMVRGYAVNGEMN 258
Query: 261 SASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQ-KVGLKPNRVTFLSVLN 319
A +LF+ + K++VSWT +ISG+A E +E F MQ + + PN VT +SVL+
Sbjct: 259 DARELFDRM--PEKDVVSWTCMISGYAQARCYTETLELFRAMQSESNVLPNEVTMVSVLS 316
Query: 320 ACSHGGLVEEGL---NFFD--KMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIP 374
AC+H +EEG F D KMV + E LIDM + GR + A K +
Sbjct: 317 ACAHLTALEEGRWAHAFIDKHKMVLDSE----FNLGAALIDMYSKCGRTDLAVKIFHSLD 372
Query: 375 SEITDVVVWRTLLGACSFHGNVE 397
+ +V W L+ + +G+V
Sbjct: 373 QK--NVSAWNALITGLAVNGDVR 393
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 70/158 (44%), Gaps = 6/158 (3%)
Query: 54 YKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLGTQLHAVISK--VGFQSHVYV 111
Y + +++ S L + T ++ CA L+ G HA I K + S +
Sbjct: 288 YTETLELFRAMQSESNVLPNEVTMVSVLSACAHLTALEEGRWAHAFIDKHKMVLDSEFNL 347
Query: 112 NTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEM----P 167
AL++MY G + K+F + ++N+ WN +ITGL G++ + +FE+M
Sbjct: 348 GAALIDMYSKCGRTDLAVKIFHSLDQKNVSAWNALITGLAVNGDVRSSIDVFEQMRRSGE 407
Query: 168 CRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEP 205
N +++ G++ +E F+ M + +P
Sbjct: 408 KPNGITFVGVLTACAHGGLVDEGRRCFQSMASTCGVQP 445
>gi|359477376|ref|XP_002280144.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
Length = 642
Score = 245 bits (625), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 126/341 (36%), Positives = 201/341 (58%), Gaps = 7/341 (2%)
Query: 115 LVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSW 174
+++ + G L+ + FD MP +N+++W +M+ G +K G+ AR LF++MP +N+V+W
Sbjct: 266 MISGFCKAGELESAKDFFDRMPNKNVISWGIMLDGYIKNGDTNGARCLFDQMPMKNLVTW 325
Query: 175 TGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQ-LIHGYG 233
+ +I GY R + +AL LF + + +P E IL ++ A Q G + + + +IH Y
Sbjct: 326 STMIGGYARNGQPLKALELFERFKE-QDIKPDETFILGIISACSQLGIIDAAESIIHNYV 384
Query: 234 EKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGK 293
+ D+RV LID YAKCG I A ++FE K+L+ ++++I+ A HG+G+
Sbjct: 385 GPSLLS--DLRVFTSLIDMYAKCGSIEKALQMFE--MAHPKDLLCYSTMIAALANHGLGR 440
Query: 294 EAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCL 353
+A+ F +MQ+ +KP+ VTFL VL AC+HGGLV+EG +F +M EE + P KHY C+
Sbjct: 441 DAIFLFDKMQRANIKPDSVTFLGVLTACNHGGLVDEGRKYFKQMTEEFGIQPSEKHYACV 500
Query: 354 IDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGY 413
+D+LGR G LE+A +P VVW LL AC H NV++ E ++ ++E
Sbjct: 501 VDLLGRVGCLEEAYNLIRNMPIA-PHSVVWGALLAACRVHCNVQLAEVAAAELFKIEPDN 559
Query: 414 GGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
G+Y+L+ NI A GR+G ++R + E K G S +
Sbjct: 560 SGNYILLSNIYAAAGRWGSVAKVRAKIREHRVRKNRGSSWI 600
Score = 144 bits (363), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 112/439 (25%), Positives = 206/439 (46%), Gaps = 52/439 (11%)
Query: 1 MHILQNSQTPNNITTQIHSHLLTTNSLLHHSQLFNTLLHFYSLAESPQKAFLLYKQLQQI 60
+HI+ N +T ++ + IH+ LL +S+ + N LL YS + A ++ ++ Q
Sbjct: 6 LHIIHNCKTLKSLKS-IHARLLIESSVASSEFVINKLLRLYSRFGATDYAHKVFDEITQP 64
Query: 61 YTHSHSPL-----------------------PPLFDSFTYSFLIRTCATLSHPNLGTQLH 97
+ + L P +FT S +++ A L+ G ++
Sbjct: 65 NAYLWTSLIHGYVENRQYDEAFSLFIQMRREPISVLNFTISSVLKALARLTRFKGGQAVY 124
Query: 98 AVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELE 157
+ K GF + V +++++++ + + + FDEM E+++V+WN+MI+G ++
Sbjct: 125 GFVLKYGFAFDLIVQNSVLDLFMRCRKVDTARQAFDEMCEKDIVSWNMMISGYGNNDRVD 184
Query: 158 FARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKM----------VACEYTEPSE 207
AR F+ MP RNVVSWT +I GY + EA LF M + Y + +
Sbjct: 185 IARKFFDRMPERNVVSWTSMICGYVKAGDMAEAQVLFDSMPVKDLASWNVMVSGYMDIGD 244
Query: 208 ITILAVLPAIWQNGDVKSCQ-LIHGY---GEKRGFTAFDIRVLN-------CLIDTYAKC 256
++ D S +I G+ GE F R+ N ++D Y K
Sbjct: 245 CVNARIIFGKMPIHDTGSWNIMISGFCKAGELESAKDFFDRMPNKNVISWGIMLDGYIKN 304
Query: 257 GCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLS 316
G A LF+ + + KNLV+W+++I G+A +G +A+E F R ++ +KP+ L
Sbjct: 305 GDTNGARCLFDQMPM--KNLVTWSTMIGGYARNGQPLKALELFERFKEQDIKPDETFILG 362
Query: 317 VLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQA-EKTALGIPS 375
+++ACS G+++ + V +L D++ + LIDM + G +E+A + + P
Sbjct: 363 IISACSQLGIIDAAESIIHNYVGP-SLLSDLRVFTSLIDMYAKCGSIEKALQMFEMAHPK 421
Query: 376 EITDVVVWRTLLGACSFHG 394
D++ + T++ A + HG
Sbjct: 422 ---DLLCYSTMIAALANHG 437
Score = 38.1 bits (87), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 86/213 (40%), Gaps = 46/213 (21%)
Query: 223 VKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSI 282
+KS + IH A V+N L+ Y++ G A K+F++I+ + N WTS+
Sbjct: 15 LKSLKSIHARLLIESSVASSEFVINKLLRLYSRFGATDYAHKVFDEIT--QPNAYLWTSL 72
Query: 283 ISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACS-----------HGGLVEEGL 331
I G+ + EA F +M++ + T SVL A + +G +++ G
Sbjct: 73 IHGYVENRQYDEAFSLFIQMRREPISVLNFTISSVLKALARLTRFKGGQAVYGFVLKYGF 132
Query: 332 NF------------------------FDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAE 367
F FD+M E+ DI + +I G R++ A
Sbjct: 133 AFDLIVQNSVLDLFMRCRKVDTARQAFDEMCEK-----DIVSWNMMISGYGNNDRVDIAR 187
Query: 368 KTALGIPSEITDVVVWRTLLGACSFHGNVEMGE 400
K +P +VV W +++ C + +M E
Sbjct: 188 KFFDRMPER--NVVSWTSMI--CGYVKAGDMAE 216
>gi|224137724|ref|XP_002322628.1| predicted protein [Populus trichocarpa]
gi|222867258|gb|EEF04389.1| predicted protein [Populus trichocarpa]
Length = 559
Score = 245 bits (625), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 130/344 (37%), Positives = 204/344 (59%), Gaps = 6/344 (1%)
Query: 113 TALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVV 172
A+V Y L ++ LF+ MPERNL +WN MITG ++ GEL +AR +F EMP +NVV
Sbjct: 166 NAMVTGYAKNMRLDEAFDLFERMPERNLSSWNTMITGFIQNGELAWARKVFNEMPEKNVV 225
Query: 173 SWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGY 232
SWT +I GY + S AL +F +M+ P+E T + VL A + Q +H
Sbjct: 226 SWTTMITGYVQEGESESALKVFVEMIKDGGARPNEGTFVNVLGACSDMAGLGEGQQVHLL 285
Query: 233 GEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMG 292
K + V + L++ Y+KCG + A K+F+D+ + +++LV W +I+ +A HG G
Sbjct: 286 ISKSVYQDRTF-VASALLNMYSKCGELSIARKIFDDVVISQRDLVLWNGMIAAYAHHGCG 344
Query: 293 KEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGC 352
EA+E F MQ +G KPN V+++ +L+ACSH GLV+EGLN+FD++ + + H+ C
Sbjct: 345 MEAIELFEDMQGLGFKPNDVSYVELLSACSHAGLVDEGLNYFDELGRDNSIQLREDHHAC 404
Query: 353 LIDMLGRAGRLEQAEK--TALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEME 410
L+D+ GRAGRL++A LG + + +W LL C+ HG++E+G+ +++ + +
Sbjct: 405 LVDLCGRAGRLKEAYDFIKQLGTKASSS---IWGGLLAGCNAHGDLEIGQLAAKELEKED 461
Query: 411 RGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
G Y+L+ NI A ++ +A R+R M E+ K PGCS +
Sbjct: 462 PENAGTYLLLSNIYASGRKWREASRVRLKMKEKGLKKQPGCSWI 505
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 81/269 (30%), Positives = 136/269 (50%), Gaps = 20/269 (7%)
Query: 130 KLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNE 189
++F+ M ERN+V+WN +I LV+ G +E AR F+EMP R+V+SWT ++ G R R +E
Sbjct: 90 EVFERMHERNMVSWNAVIAALVQCGRVEEARRRFDEMPKRDVISWTTMVMGLARSGRVDE 149
Query: 190 ALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCL 249
A +F +M E + ++ A++ G K+ +L + ++ N +
Sbjct: 150 ARKVFDRM-----PERNVVSWNAMV-----TGYAKNMRLDEAFDLFERMPERNLSSWNTM 199
Query: 250 IDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKV-GLK 308
I + + G + A K+F ++ KN+VSWT++I+G+ G + A++ F M K G +
Sbjct: 200 ITGFIQNGELAWARKVFNEMP--EKNVVSWTTMITGYVQEGESESALKVFVEMIKDGGAR 257
Query: 309 PNRVTFLSVLNACSHGGLVEEGLN---FFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQ 365
PN TF++VL ACS + EG K V + L++M + G L
Sbjct: 258 PNEGTFVNVLGACSDMAGLGEGQQVHLLISKSVYQDRTFV----ASALLNMYSKCGELSI 313
Query: 366 AEKTALGIPSEITDVVVWRTLLGACSFHG 394
A K + D+V+W ++ A + HG
Sbjct: 314 ARKIFDDVVISQRDLVLWNGMIAAYAHHG 342
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 65/128 (50%), Gaps = 6/128 (4%)
Query: 76 TYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDE- 134
T+ ++ C+ ++ G Q+H +ISK +Q +V +AL+NMY G L + K+FD+
Sbjct: 262 TFVNVLGACSDMAGLGEGQQVHLLISKSVYQDRTFVASALLNMYSKCGELSIARKIFDDV 321
Query: 135 -MPERNLVTWNVMITGLVKWGELEFARSLFEEMPC----RNVVSWTGIIDGYTRMNRSNE 189
+ +R+LV WN MI G A LFE+M N VS+ ++ + +E
Sbjct: 322 VISQRDLVLWNGMIAAYAHHGCGMEAIELFEDMQGLGFKPNDVSYVELLSACSHAGLVDE 381
Query: 190 ALALFRKM 197
L F ++
Sbjct: 382 GLNYFDEL 389
>gi|297809863|ref|XP_002872815.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318652|gb|EFH49074.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 776
Score = 245 bits (625), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 140/381 (36%), Positives = 212/381 (55%), Gaps = 44/381 (11%)
Query: 109 VYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPC 168
V+ TA+V+ Y+ ++++ +LFD MPERN V+WN M+ G V+ +E A+ LF+ MPC
Sbjct: 276 VFTWTAMVSGYIQNRMVEEARELFDRMPERNEVSWNAMLAGYVQGERVEMAKELFDVMPC 335
Query: 169 RNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNG------- 221
RNV +W +I GY + + +EA LF KM + ++ A++ Q+G
Sbjct: 336 RNVSTWNTMITGYAQCGKISEAKNLFDKM-----PKRDPVSWAAMIAGYSQSGHSYEALR 390
Query: 222 -------------------------DVKSCQL---IHGYGEKRGFTAFDIRVLNCLIDTY 253
DV + +L +HG K G+ V N L+ Y
Sbjct: 391 LFVLMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYET-GCFVGNALLLMY 449
Query: 254 AKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVT 313
KCG I A+ LF++++ K++VSW ++I+G++ HG G+EA+ F M++ GLKP+ T
Sbjct: 450 CKCGSIEEANDLFKEMAG--KDIVSWNTMIAGYSRHGFGEEALRFFESMKREGLKPDDAT 507
Query: 314 FLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGI 373
++VL+ACSH GLV++G +F M ++ V P+ +HY C++D+LGRAG LE+A +
Sbjct: 508 MVAVLSACSHTGLVDKGRQYFHTMTQDYGVRPNSQHYACMVDLLGRAGLLEEAHNLMKNM 567
Query: 374 PSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDA 433
P E D +W TLLGA HGN E+ E KI ME G YVL+ N+ A GR+GD
Sbjct: 568 PFE-PDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDV 626
Query: 434 ERLRRVMDERNAFKVPGCSLV 454
+LR M ++ KVPG S +
Sbjct: 627 GKLRVRMRDKGVKKVPGYSWI 647
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 104/386 (26%), Positives = 178/386 (46%), Gaps = 38/386 (9%)
Query: 23 TTNSLLHHSQLFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIR 82
+ N L N+ +F+S S Q QI PLP DS + +
Sbjct: 15 SLNGLKRRYNNANSASNFHSSKSSTQ---------TQIQKSQTKPLPKSGDSDIKEWNVA 65
Query: 83 TCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVT 142
+ + L V ++ S V N A+++ Y+ G + + LFDEMPER+LV+
Sbjct: 66 ISSYMRTGRCSEALR-VFKRMPRWSSVSYN-AMISGYLRNGEFELARMLFDEMPERDLVS 123
Query: 143 WNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEY 202
WNVMI G V+ L AR LFE MP R+V SW I+ GY + ++A +F +M
Sbjct: 124 WNVMIKGYVRNRNLGKARELFERMPERDVCSWNTILSGYAQNGCVDDARRVFDRM----- 178
Query: 203 TEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSA 262
E ++++ A+L A QN ++ ++ G E ++ NCL+ + K I A
Sbjct: 179 PEKNDVSWNALLSAYVQNSKLEEACVLFGSRENWALVSW-----NCLLGGFVKKKKIVEA 233
Query: 263 SKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKP--NRVTFLSVLNA 320
+ F+ + V +++VSW +II+G+A +G EA + F P + T+ ++++
Sbjct: 234 RQFFDSMKV--RDVVSWNTIITGYAQNGEIDEARQLFDE------SPVHDVFTWTAMVSG 285
Query: 321 CSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDV 380
+VEE FD+M E EV + ++ + R+E A++ +P +V
Sbjct: 286 YIQNRMVEEARELFDRMPERNEV-----SWNAMLAGYVQGERVEMAKELFDVMPCR--NV 338
Query: 381 VVWRTLLGACSFHGNVEMGERVTRKI 406
W T++ + G + + + K+
Sbjct: 339 STWNTMITGYAQCGKISEAKNLFDKM 364
>gi|147825156|emb|CAN75501.1| hypothetical protein VITISV_034156 [Vitis vinifera]
Length = 532
Score = 245 bits (625), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 133/382 (34%), Positives = 217/382 (56%), Gaps = 4/382 (1%)
Query: 73 DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLF 132
D TY F+ + A LS L +H I+K G ++ +L++MY S G + + K+F
Sbjct: 104 DHLTYPFVAKAVARLSELRLALAVHCRIAKEGLWFDRFIANSLIHMYGSCGDIGSARKVF 163
Query: 133 DEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALA 192
DEM RN V+WN M+ G K G+L+ A +F MP R+VVSW+ +IDG + ALA
Sbjct: 164 DEMLIRNSVSWNAMLDGYAKCGDLDSAHQVFXSMPDRDVVSWSSMIDGCVKGGEYGVALA 223
Query: 193 LFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDT 252
+F +M + + +T+++VL A G ++ + +H Y F + + L+D
Sbjct: 224 IFERMRVVG-PKANXVTMVSVLCACAHLGALEXGRXMHQYMVDNTMR-FTLVLRTSLMDM 281
Query: 253 YAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRV 312
YAKCG I A +F + +++ +++ W +II G A HG+ E++E F MQ +G+ P+ +
Sbjct: 282 YAKCGAIEEAIAVFRGVPMDQTDVLMWNTIIGGLATHGLVXESLELFKEMQVLGIVPDEI 341
Query: 313 TFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALG 372
T+L + +AC+HGGLV E +FF + ++ ++P +HY C++D+L RAG+L +A
Sbjct: 342 TYLCLFSACAHGGLVHEAWHFFKSLGKQ-GMVPKSEHYACMVDVLSRAGQLAEAYDFIAQ 400
Query: 373 IPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGD 432
+P E T ++ LL C H ++ ERV RK++E+E + G Y+ + N+ AGV + +
Sbjct: 401 MPMEPTASML-GALLNGCMNHRRFDLAERVGRKLIELEPDHDGRYIGLSNVYAGVKLWDN 459
Query: 433 AERLRRVMDERNAFKVPGCSLV 454
A +R M+ R K PG S V
Sbjct: 460 ARMMREAMERRGVKKSPGFSFV 481
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 92/332 (27%), Positives = 153/332 (46%), Gaps = 38/332 (11%)
Query: 81 IRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYV--SLGFLKDSSKLFDEMPER 138
++ C ++S Q+ A G H + L++ S G + S ++F ++P
Sbjct: 12 LKNCRSMSEFK---QIQAFFITSGLSQHHPFASRLLSFSAISSWGDIDHSYRIFLQIPSP 68
Query: 139 NLVTWNVMITGLVKWGELEFARSLFEEM----PCRNVVSWTGIIDGYTRMNRSNEALALF 194
+ WN +I G K + S+F +M C + +++ + R++ ALA
Sbjct: 69 TISNWNSIIRGFSKGKNPNPSVSVFVKMLRFGVCPDHLTYPFVAKAVARLSELRLALA-- 126
Query: 195 RKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGE-------KRGFTAFDIR--- 244
V C + +W + + + LIH YG ++ F IR
Sbjct: 127 ---VHCRIAK----------EGLWFDRFIAN-SLIHMYGSCGDIGSARKVFDEMLIRNSV 172
Query: 245 VLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQK 304
N ++D YAKCG + SA ++F S+ +++VSW+S+I G G A+ F RM+
Sbjct: 173 SWNAMLDGYAKCGDLDSAHQVFX--SMPDRDVVSWSSMIDGCVKGGEYGVALAIFERMRV 230
Query: 305 VGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLE 364
VG K N VT +SVL AC+H G +E G MV+ + L+DM + G +E
Sbjct: 231 VGPKANXVTMVSVLCACAHLGALEXGRXMHQYMVDNTMRFTLVLRTS-LMDMYAKCGAIE 289
Query: 365 QAEKTALGIPSEITDVVVWRTLLGACSFHGNV 396
+A G+P + TDV++W T++G + HG V
Sbjct: 290 EAIAVFRGVPMDQTDVLMWNTIIGGLATHGLV 321
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/105 (23%), Positives = 51/105 (48%), Gaps = 2/105 (1%)
Query: 70 PLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSS 129
P + T ++ CA L G +H + + + + T+L++MY G ++++
Sbjct: 233 PKANXVTMVSVLCACAHLGALEXGRXMHQYMVDNTMRFTLVLRTSLMDMYAKCGAIEEAI 292
Query: 130 KLFDEMP--ERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVV 172
+F +P + +++ WN +I GL G + + LF+EM +V
Sbjct: 293 AVFRGVPMDQTDVLMWNTIIGGLATHGLVXESLELFKEMQVLGIV 337
>gi|326532272|dbj|BAK05065.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 889
Score = 245 bits (625), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 127/380 (33%), Positives = 214/380 (56%), Gaps = 4/380 (1%)
Query: 73 DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLF 132
D F + +I C+ L QLH++ K G V ++ +L++MY G L+++ +F
Sbjct: 394 DQFALATIISGCSNRMDMCLARQLHSLSLKSGHTRAVVISNSLISMYAKCGNLQNAESIF 453
Query: 133 DEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALA 192
M ER++V+W M+T + G + AR F+ M RNV++W ++ Y + + L
Sbjct: 454 SSMEERDIVSWTGMLTAYSQVGNIGKAREFFDGMSTRNVITWNAMLGAYIQHGAEEDGLK 513
Query: 193 LFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDT 252
++ M+ + P +T + + G K I G+ K G D V+N +I
Sbjct: 514 MYSAMLTEKDVIPDWVTYVTLFRGCADMGANKLGDQITGHTVKVGLI-LDTSVMNAVITM 572
Query: 253 YAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRV 312
Y+KCG I A K+F+ +S RK+LVSW ++I+G++ HGMGK+A+E F M K G KP+ +
Sbjct: 573 YSKCGRISEARKIFDFLS--RKDLVSWNAMITGYSQHGMGKQAIEIFDDMLKKGAKPDYI 630
Query: 313 TFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALG 372
++++VL++CSH GLV+EG +FD + + V P ++H+ C++D+L RAG L +A+
Sbjct: 631 SYVAVLSSCSHSGLVQEGKFYFDMLKRDHNVSPGLEHFSCMVDLLARAGNLIEAKNLIDE 690
Query: 373 IPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGD 432
+P + T VW LL AC HGN E+ E + + +++ G Y+L+ I A G+ D
Sbjct: 691 MPMKPT-AEVWGALLSACKTHGNNELAELAAKHLFDLDSPDSGGYMLLAKIYADAGKSVD 749
Query: 433 AERLRRVMDERNAFKVPGCS 452
+ ++R++M ++ K PG S
Sbjct: 750 SAQVRKLMRDKGIKKNPGYS 769
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 92/332 (27%), Positives = 158/332 (47%), Gaps = 19/332 (5%)
Query: 71 LFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSK 130
L ++FT+ +++C L + QL +++K GFQ V T +V+M+V G + +SK
Sbjct: 159 LPNAFTFGCAMKSCGALGWHEVALQLLGLLTKFGFQGDPDVATGIVDMFVRCGAVDFASK 218
Query: 131 LFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEA 190
F ++ + N M+ G K ++ A LFE MP R+VVSW ++ ++ R+ EA
Sbjct: 219 QFSQIERPTVFCRNSMLAGYAKSYGVDHALELFESMPERDVVSWNMMVSALSQSGRAREA 278
Query: 191 LALF-----RKMVACEYTEPSEITILAVLPAI-WQNGDVKSCQLIHGYGEKRGFTAFDIR 244
L++ R + T S +T A L ++ W G Q+I R D
Sbjct: 279 LSVAVDMHNRGVRLDSTTYTSSLTACAKLSSLGW--GKQLHAQVI------RSLPCIDPY 330
Query: 245 VLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQK 304
V + +++ YAKCGC A ++F S+ +N VSWT +I GF +G E++E F +M+
Sbjct: 331 VASAMVELYAKCGCFKEARRVFS--SLRDRNTVSWTVLIGGFLQYGCFSESLELFNQMRA 388
Query: 305 VGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLE 364
+ ++ ++++ CS+ + ++ + LI M + G L+
Sbjct: 389 ELMTVDQFALATIISGCSNRMDMCLARQLHSLSLKSGHTRAVVIS-NSLISMYAKCGNLQ 447
Query: 365 QAEKTALGIPSEITDVVVWRTLLGACSFHGNV 396
AE + E D+V W +L A S GN+
Sbjct: 448 NAESIFSSM--EERDIVSWTGMLTAYSQVGNI 477
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 83/341 (24%), Positives = 143/341 (41%), Gaps = 38/341 (11%)
Query: 81 IRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLF-DEMPERN 139
+R+C LH + VG S V++ L++ Y+S G L D+ L ++ E N
Sbjct: 35 LRSCGARGALAGARALHGRLVSVGLASAVFLQNTLLHAYLSCGALPDARGLLRGDITEPN 94
Query: 140 LVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVA 199
++T N+M+ G K G L A LF MP R+V SW ++ GY + R +A+ F M
Sbjct: 95 VITHNIMMNGYAKLGSLSDAEELFGRMPRRDVTSWNTLMSGYYQSGRFLDAMESFVSMRR 154
Query: 200 CEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCI 259
+ P+ T + + G + + G K GF D V ++D + +CG +
Sbjct: 155 SGDSLPNAFTFGCAMKSCGALGWHEVALQLLGLLTKFGFQG-DPDVATGIVDMFVRCGAV 213
Query: 260 FSASKLFEDI-----------------------------SVERKNLVSWTSIISGFAMHG 290
ASK F I S+ +++VSW ++S + G
Sbjct: 214 DFASKQFSQIERPTVFCRNSMLAGYAKSYGVDHALELFESMPERDVVSWNMMVSALSQSG 273
Query: 291 MGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHY 350
+EA+ M G++ + T+ S L AC+ + G +++ LP I Y
Sbjct: 274 RAREALSVAVDMHNRGVRLDSTTYTSSLTACAKLSSLGWGKQLHAQVIRS---LPCIDPY 330
Query: 351 --GCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGA 389
++++ + G ++A + + T V W L+G
Sbjct: 331 VASAMVELYAKCGCFKEARRVFSSLRDRNT--VSWTVLIGG 369
>gi|414865038|tpg|DAA43595.1| TPA: hypothetical protein ZEAMMB73_741081 [Zea mays]
Length = 400
Score = 245 bits (625), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 142/392 (36%), Positives = 229/392 (58%), Gaps = 22/392 (5%)
Query: 73 DSFTYSFLIRTCATLSHPNLG--TQLHAVISKVGF----QSHVYVNTALVNMYVSLGFLK 126
D+FT++F+++ L G + LHA K G H +V+ AL++ Y S +
Sbjct: 11 DAFTFTFVLKVLLPLPFALFGYLSDLHAQAFKHGCLGAGSEHGHVHNALLHAYASRSAVD 70
Query: 127 DSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNR 186
D+S++FDEMP R++V+++ ++T +K L+ R +F++MP R+VVSWT +I Y R R
Sbjct: 71 DASRVFDEMPVRDVVSFSGLLTAHLKNNHLDSVRMVFDQMPHRDVVSWTAMISAYARAWR 130
Query: 187 SNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVL 246
EALALF M +P E+T+++V+ A GD+++ + + Y + GF + + +
Sbjct: 131 PQEALALFDAMT----VQPDEVTMVSVVSACTALGDLETGERLRQYVDSNGF-GWMVSLR 185
Query: 247 NCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRM--QK 304
N L+D YAKCGC+ A LF+ +++ ++L SW ++IS +A HG + + F M
Sbjct: 186 NALMDMYAKCGCLTEARVLFDGMAI--RSLASWNTLISAYASHGDVENTLALFHMMLADD 243
Query: 305 VGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMV--EECEVLPDIKHYGCLIDMLGRAGR 362
+KP+ VT L+VL +H G VEEG FD + + +V I+HYGC++D+L RAG+
Sbjct: 244 NYVKPDGVTLLAVLTVYAHKGCVEEGRTVFDAIERGDYGKVEVTIEHYGCMVDLLSRAGQ 303
Query: 363 LEQAEKT--ALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLM 420
L++A K + IP+ + VVW LLGAC HGN++M E+ +K+ + GG Y+L+
Sbjct: 304 LDEAYKMIEQMSIPN---NDVVWGVLLGACRMHGNIDMAEKAVQKLRILNPHEGGYYILL 360
Query: 421 YNILAGVGRFGDAERLRRVMDERNAFKVPGCS 452
++ GR +A +RR M+E A K G S
Sbjct: 361 IDMYTAAGRTAEAMEIRRTMNETGANKTTGWS 392
>gi|293331391|ref|NP_001168246.1| uncharacterized protein LOC100382009 [Zea mays]
gi|223946981|gb|ACN27574.1| unknown [Zea mays]
gi|413932359|gb|AFW66910.1| hypothetical protein ZEAMMB73_426189 [Zea mays]
Length = 499
Score = 245 bits (625), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 123/342 (35%), Positives = 198/342 (57%), Gaps = 3/342 (0%)
Query: 113 TALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVV 172
T +V + S G L + FD M ERN+V+WN M++ + G L AR LF+ MP RN
Sbjct: 150 TTMVTGHASAGGLGRARHFFDAMSERNVVSWNAMLSAYARAGMLTEARDLFDAMPTRNAA 209
Query: 173 SWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGY 232
+W+ +I G R EAL LF MV P+E +++V+ A Q ++ +H Y
Sbjct: 210 TWSCMISGLVLSGRCWEALGLFGDMVHSSGIVPNEPALVSVVSACAQMRSLEHGAWVHAY 269
Query: 233 GEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMG 292
E+ A + + + +ID Y KCG I SA ++F + + +N+ SW ++I+G AM+G
Sbjct: 270 AEQELQGAMSVVLASAIIDMYGKCGGIHSAIRVFAAMPM--RNIYSWNAMITGLAMNGGE 327
Query: 293 KEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGC 352
++A+ +MQ VG++PN +TF+ +L+AC+H GLV EG FD M+E+ + P +HYG
Sbjct: 328 RQALSLLWKMQMVGVQPNDITFIGLLSACTHSGLVNEGRRLFDSMIEDFGIQPFPQHYGL 387
Query: 353 LIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERG 412
++D++GR+GR+ +A +P E +W L AC HG VE+GE V +K++E+E
Sbjct: 388 MVDLIGRSGRVMEALYFVKSMPVE-PHPGLWGALASACKMHGKVELGEEVAKKLIELEPR 446
Query: 413 YGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
+G Y+L+ N+ V R+ D +R+++ R K G ++V
Sbjct: 447 HGSRYILLSNLYGSVNRWDDMASVRKILKRRKVPKGTGNAVV 488
>gi|345505234|gb|AEN99841.1| chlororespiratory reduction 4, partial [Raphanus sativus]
Length = 577
Score = 245 bits (625), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 133/344 (38%), Positives = 209/344 (60%), Gaps = 8/344 (2%)
Query: 113 TALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVV 172
+++ YV G ++D+ LFD MP R++VTW +MI G K G + A++LF++MP R+VV
Sbjct: 228 NSMIGGYVKHGRIEDAKGLFDVMPRRDVVTWAIMIDGYGKLGLVHQAKTLFDQMPHRDVV 287
Query: 173 SWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGY 232
++ ++ G+ + EAL +F M + P E T++ VL AI Q G + +H Y
Sbjct: 288 AYNSMMSGFVQNRYHIEALEVFNHMEKESHLSPDETTLVIVLSAIAQLGRLTKAIDMHLY 347
Query: 233 -GEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGM 291
EKR + + V LID Y+KCG I A ++FE I E K++ W ++I G A+HG+
Sbjct: 348 IVEKRFLLSGKLGV--ALIDMYSKCGSIQHAMRVFEGI--ESKSIDHWNAMIGGLAVHGL 403
Query: 292 GKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYG 351
G+ A + ++++ +KP+ +TF+ VLNACSH GLV+EGL F+ M + ++ P ++HYG
Sbjct: 404 GESAFDMLLQIERRSIKPDHITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYG 463
Query: 352 CLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMER 411
C++D+L R+G +E A+ +P E D V+WRT L ACS H E GE V + ++ ++
Sbjct: 464 CMVDILARSGSIELAKNLIEEMPIEPND-VIWRTFLNACSHHKEFETGELVAKHLI-LQA 521
Query: 412 GYG-GDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
GY YVL+ N+ A G + D R+R +M E+ K+PGCS +
Sbjct: 522 GYNPSSYVLLSNMYASNGMWKDVRRVRTMMKEKKIEKLPGCSWI 565
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 108/383 (28%), Positives = 193/383 (50%), Gaps = 30/383 (7%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNL 92
L+N ++ +S P+KA LL+ + + L D F+ S +++ C+ L
Sbjct: 60 LWNAVIKSHSHGADPRKALLLFCLMLENGV--------LVDKFSMSLVLKACSRLGFAKE 111
Query: 93 GTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVK 152
G Q+H + K S +++ L+ +Y+ G L + ++FD MP+R+ V++N MI G VK
Sbjct: 112 GMQVHGFLIKSRTWSDLFLQNCLIGLYLKCGCLGFARQVFDRMPQRDSVSYNSMIDGYVK 171
Query: 153 WGELEFARSLFEEMP--CRNVVSWTGIIDGYT-RMNRSNEALALFRKMVACEYTEPSEIT 209
G +E A LF+ MP RN+++W +I GY R + N A LF +M E I+
Sbjct: 172 CGLVESAGELFDLMPREKRNLITWNSMIGGYAQRADGVNVASKLFDEM-----PEKDLIS 226
Query: 210 ILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDI 269
+++ ++G ++ + + +R D+ +ID Y K G + A LF+ +
Sbjct: 227 WNSMIGGYVKHGRIEDAKGLFDVMPRR-----DVVTWAIMIDGYGKLGLVHQAKTLFDQM 281
Query: 270 SVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVG-LKPNRVTFLSVLNACSHGGLVE 328
+++V++ S++SGF + EA+E F M+K L P+ T + VL+A + G +
Sbjct: 282 P--HRDVVAYNSMMSGFVQNRYHIEALEVFNHMEKESHLSPDETTLVIVLSAIAQLGRLT 339
Query: 329 EGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLG 388
+ ++ +VE+ +L K LIDM + G ++ A + GI S+ D W ++G
Sbjct: 340 KAIDMHLYIVEKRFLLSG-KLGVALIDMYSKCGSIQHAMRVFEGIESKSID--HWNAMIG 396
Query: 389 ACSFHGNVEMGERVTRKILEMER 411
+ HG +GE +L++ER
Sbjct: 397 GLAVHG---LGESAFDMLLQIER 416
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/233 (21%), Positives = 92/233 (39%), Gaps = 37/233 (15%)
Query: 59 QIYTH--SHSPLPPLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALV 116
+++ H S L P D T ++ A L +H I + F + AL+
Sbjct: 307 EVFNHMEKESHLSP--DETTLVIVLSAIAQLGRLTKAIDMHLYIVEKRFLLSGKLGVALI 364
Query: 117 NMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTG 176
+MY G ++ + ++F+ + +++ WN MI GL G E A + ++ R++
Sbjct: 365 DMYSKCGSIQHAMRVFEGIESKSIDHWNAMIGGLAVHGLGESAFDMLLQIERRSI----- 419
Query: 177 IIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKR 236
+P IT + VL A +G VK L ++
Sbjct: 420 ---------------------------KPDHITFVGVLNACSHSGLVKEGLLCFELMRRK 452
Query: 237 GFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMH 289
++ C++D A+ G I A L E++ +E N V W + ++ + H
Sbjct: 453 HKIEPRLQHYGCMVDILARSGSIELAKNLIEEMPIE-PNDVIWRTFLNACSHH 504
>gi|345505214|gb|AEN99831.1| chlororespiratory reduction 4 [Brassica rapa]
Length = 612
Score = 245 bits (625), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 130/343 (37%), Positives = 208/343 (60%), Gaps = 6/343 (1%)
Query: 113 TALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVV 172
+++ YV G ++D+ LFD MP R++VTW +MI G K G + A++LF++MP R+VV
Sbjct: 263 NSMIGGYVKHGRIEDAKGLFDVMPRRDVVTWAIMIDGYGKLGLVHEAKTLFDQMPHRDVV 322
Query: 173 SWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGY 232
+ ++ G + EAL +F M + P E +++ VL A Q G + +H Y
Sbjct: 323 VYNSMMSGXVQNRYHMEALEVFNHMEKESHLTPDETSLVIVLSAXAQLGRLSKAIDMHLY 382
Query: 233 GEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMG 292
++ F + ++ LID Y+KCG I A ++FE I E K++ W ++I G A+HG+G
Sbjct: 383 IVEKQFPSSG-KLGVALIDMYSKCGSIQHAMRVFEGI--ESKSIDHWNAMIGGLAVHGLG 439
Query: 293 KEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGC 352
+ A + ++++ +KP+ +TF+ VLNACSH GLV+EGL F+ M + ++ P ++HYGC
Sbjct: 440 ESAFDMLLQIERRSIKPDHITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGC 499
Query: 353 LIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERG 412
++D+L R+G +E A+ G+P E D V+WRT L ACS H E GE V + ++ ++ G
Sbjct: 500 MVDILARSGSIELAKNLIEGMPIEPND-VIWRTFLTACSHHKEFETGELVAKHLI-LQAG 557
Query: 413 YG-GDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
Y YVL+ N+ A G + D R+R +M E+N K+PGCS +
Sbjct: 558 YNPSSYVLLSNMYASNGMWKDVRRVRTMMKEKNIEKIPGCSWI 600
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 111/400 (27%), Positives = 200/400 (50%), Gaps = 34/400 (8%)
Query: 18 HSHLLTTNSLLHHSQLFNTLLHFYSLAESPQKA-FLLYKQLQQIYTHSHSPLPPLFDSFT 76
H H ++++ + L+N ++ +S P+KA FLL L+ + +P D F+
Sbjct: 80 HEHHVSSSGEVEDPFLWNVVIKSHSHGVDPRKALFLLCLMLE-------NGVP--VDKFS 130
Query: 77 YSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMP 136
+S ++ C+ L GTQ+H + K G S +++ L+ +Y+ G L + ++FD MP
Sbjct: 131 FSLALKACSRLGFVKEGTQVHGFLIKTGTWSDLFLQNCLIGLYIKCGCLGFARQVFDRMP 190
Query: 137 ERNLVTWNVMITGLVKWGELEFARSLFEEMP--CRNVVSWTGIIDGYT-RMNRSNEALAL 193
+R+ V++N MI G +K G +E A LF MP RN+++W +I GY R + N A L
Sbjct: 191 QRDSVSYNSMIDGYLKCGLVESAGELFGLMPREKRNLITWNSMIGGYAQRADGVNVAAKL 250
Query: 194 FRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTY 253
F +M E I+ +++ ++G ++ + + +R D+ +ID Y
Sbjct: 251 FDEM-----PEKDLISWNSMIGGYVKHGRIEDAKGLFDVMPRR-----DVVTWAIMIDGY 300
Query: 254 AKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVG-LKPNRV 312
K G + A LF+ + +++V + S++SG + EA+E F M+K L P+
Sbjct: 301 GKLGLVHEAKTLFDQMP--HRDVVVYNSMMSGXVQNRYHMEALEVFNHMEKESHLTPDET 358
Query: 313 TFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYG-CLIDMLGRAGRLEQAEKTAL 371
+ + VL+A + G + + ++ +VE + P G LIDM + G ++ A +
Sbjct: 359 SLVIVLSAXAQLGRLSKAIDMHLYIVE--KQFPSSGKLGVALIDMYSKCGSIQHAMRVFE 416
Query: 372 GIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMER 411
GI S+ D W ++G + HG +GE +L++ER
Sbjct: 417 GIESKSID--HWNAMIGGLAVHG---LGESAFDMLLQIER 451
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/233 (21%), Positives = 93/233 (39%), Gaps = 37/233 (15%)
Query: 59 QIYTH--SHSPLPPLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALV 116
+++ H S L P D + ++ A L + +H I + F S + AL+
Sbjct: 342 EVFNHMEKESHLTP--DETSLVIVLSAXAQLGRLSKAIDMHLYIVEKQFPSSGKLGVALI 399
Query: 117 NMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTG 176
+MY G ++ + ++F+ + +++ WN MI GL G E A + ++ R++
Sbjct: 400 DMYSKCGSIQHAMRVFEGIESKSIDHWNAMIGGLAVHGLGESAFDMLLQIERRSI----- 454
Query: 177 IIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKR 236
+P IT + VL A +G VK L ++
Sbjct: 455 ---------------------------KPDHITFVGVLNACSHSGLVKEGLLCFELMRRK 487
Query: 237 GFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMH 289
++ C++D A+ G I A L E + +E N V W + ++ + H
Sbjct: 488 HKIEPRLQHYGCMVDILARSGSIELAKNLIEGMPIE-PNDVIWRTFLTACSHH 539
>gi|242085334|ref|XP_002443092.1| hypothetical protein SORBIDRAFT_08g008260 [Sorghum bicolor]
gi|241943785|gb|EES16930.1| hypothetical protein SORBIDRAFT_08g008260 [Sorghum bicolor]
Length = 655
Score = 245 bits (625), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 136/367 (37%), Positives = 212/367 (57%), Gaps = 12/367 (3%)
Query: 92 LGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLV 151
LG +H + + G + V + ALV+M+ G + + ++FD MP +++ +W M++
Sbjct: 251 LGRMVHQCVVESGVRMSVNLENALVDMFGKCGCVASAKEIFDGMPIKDVYSWTSMVSAYA 310
Query: 152 KWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITIL 211
K G+LE A LF+E+P RN VSW+ ++ Y++ N EA+ +F M+A EP + T++
Sbjct: 311 KCGDLENAGKLFKEIPNRNAVSWSCMVAAYSQANLPEEAMRIFNDMIAAG-VEPIDATLV 369
Query: 212 AVLPAIWQNG--DVKSCQLIHGY--GEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFE 267
+VL A Q G DV C L Y K T + + N ID +AKCG + +AS+LF
Sbjct: 370 SVLSACAQLGCLDVGRC-LYDAYIVSHKVELT---VNLSNAFIDMFAKCGDVGAASRLFR 425
Query: 268 DISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLV 327
++ E KN+VSW ++I A+HG +EA+ F + + +G+ P+ +T++ VL+ACSH GLV
Sbjct: 426 NM--EDKNVVSWNTMIVAHALHGQSEEALHLFQKFKAIGIFPDEITYIGVLSACSHSGLV 483
Query: 328 EEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLL 387
EG F +M + P +HY C+ID+LG+ G LE+A + A +P D W LL
Sbjct: 484 SEGRYHFKEMKIVYGIEPRAEHYACMIDLLGKVGLLEEAFEVARSMPVG-ADEAGWGALL 542
Query: 388 GACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFK 447
AC HGNVE+G+ K++ ++ G YVLM I A ++G + +R VM +R K
Sbjct: 543 NACRMHGNVEIGKCAADKLVGLDPSDSGIYVLMSQIYASKSKWGQVKMIRTVMRDRGVKK 602
Query: 448 VPGCSLV 454
PGCS +
Sbjct: 603 NPGCSSI 609
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 100/398 (25%), Positives = 175/398 (43%), Gaps = 74/398 (18%)
Query: 30 HSQLFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSH 89
++ + T++ + A P A L++++ + LP D+ T F ++ T S
Sbjct: 96 NAYMLATMMRGFLRAGKPAHALALFRRVLR------DRLPA--DARTIVFAVKAATTSSS 147
Query: 90 PNLGTQLHAVISKVGFQSH-VYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMIT 148
P +H V K GF V V ALV+MY S L D+ KLFDEM +R++V+W
Sbjct: 148 P--AEAIHCVAFKRGFIGQSVLVGNALVHMYASSMSLPDARKLFDEMADRDVVSW----- 200
Query: 149 GLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEI 208
T ++DGY R +EA +F +MV P+E+
Sbjct: 201 --------------------------TTLVDGYARGGLPDEAWRVFCRMVVAGGGWPNEV 234
Query: 209 TILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFED 268
T++A A Q G + +++H + G + + N L+D + KCGC+ SA ++F+
Sbjct: 235 TLVAAASAAGQIGLLGLGRMVHQCVVESGVR-MSVNLENALVDMFGKCGCVASAKEIFDG 293
Query: 269 ISVE-----------------------------RKNLVSWTSIISGFAMHGMGKEAVENF 299
+ ++ +N VSW+ +++ ++ + +EA+ F
Sbjct: 294 MPIKDVYSWTSMVSAYAKCGDLENAGKLFKEIPNRNAVSWSCMVAAYSQANLPEEAMRIF 353
Query: 300 GRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGR 359
M G++P T +SVL+AC+ G ++ G +D + +V + IDM +
Sbjct: 354 NDMIAAGVEPIDATLVSVLSACAQLGCLDVGRCLYDAYIVSHKVELTVNLSNAFIDMFAK 413
Query: 360 AGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVE 397
G + A + + E +VV W T++ A + HG E
Sbjct: 414 CGDVGAASRLFRNM--EDKNVVSWNTMIVAHALHGQSE 449
>gi|449432255|ref|XP_004133915.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350,
chloroplastic-like [Cucumis sativus]
gi|449480068|ref|XP_004155790.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350,
chloroplastic-like [Cucumis sativus]
Length = 638
Score = 245 bits (625), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 127/340 (37%), Positives = 208/340 (61%), Gaps = 4/340 (1%)
Query: 115 LVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSW 174
++ + G ++ + LF+ MP+R++++W+ MI G K G+++ AR+LF+EMP ++VV++
Sbjct: 262 IIGGFAKCGRIEFAHSLFNRMPKRDVISWSNMIDGYAKLGDIKVARTLFDEMPDKDVVAF 321
Query: 175 TGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGE 234
I+ GY + EAL +F +M P E T++ L AI Q G V+ +H Y
Sbjct: 322 NTIMAGYAQNGYYTEALEIFHEMQRQSNLSPDETTLVVALSAISQLGHVEKAASMHNYFL 381
Query: 235 KRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKE 294
+ G + +V LID Y+KCG I +A +F+ V++K + W ++ISG A +G+GK
Sbjct: 382 ENGISVTG-KVAVALIDMYSKCGSIENAILIFD--GVDQKGIDHWNAMISGMARNGLGKL 438
Query: 295 AVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLI 354
A M ++ +KP+ +TF+ VLNAC+H GLV+EGL F+ M + ++ P ++HYGC++
Sbjct: 439 AFGMLLEMHRLSVKPDGITFIGVLNACAHAGLVKEGLICFELMRKVHKLEPKLQHYGCMV 498
Query: 355 DMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYG 414
D+LG+AG +E A K +P E D ++WRTLL AC H N +GE + + ++ M+
Sbjct: 499 DILGKAGLVEGALKFIEEMPIEPND-IIWRTLLSACQNHENFTIGELIAKHLMTMDSCNS 557
Query: 415 GDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
YVL+ NI A +G + A ++R +M ++N KVPGCS +
Sbjct: 558 SSYVLLSNIYARLGLWSAASKVRMMMKKQNLTKVPGCSWI 597
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 113/448 (25%), Positives = 211/448 (47%), Gaps = 58/448 (12%)
Query: 3 ILQNSQTPNNITTQIHSHLLTTNSLLHHSQLFNTLLHFYSLAESPQKAF----------- 51
+L++ +T N++ Q+H+ ++ T L + S +L+ S P F
Sbjct: 20 LLRHCETQNDVN-QVHARIIKTGYLKNSSLTTKIILNSISSPHKPLVEFARYVFFTRYAV 78
Query: 52 ------------LLYKQLQQIYTHSHSPLPPLF------------DSFTYSFLIRTCATL 87
L+ + + Y+H + P+ L D F++S +++ CA +
Sbjct: 79 QRIRRNHLDDDPFLWNAVIKSYSHGNEPVRALVLFCMMLENGFCVDKFSFSLILKACARV 138
Query: 88 SHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMI 147
G Q+H ++ K+ S++++ L+ MY+ G ++ + ++FD MP ++ V++N MI
Sbjct: 139 CLVEEGKQIHGLLMKLEIGSNLFLLNCLIAMYLRCGDIEFARQVFDRMPIQDSVSYNSMI 198
Query: 148 TGLVKWGELEFARSLFEEMPC--RNVVSWTGIIDGYTRMNRS-NEALALFRKMVACEYTE 204
G VK G ++ AR LF+ MP +N++SW ++ G+ + AL LF KM E
Sbjct: 199 DGYVKSGTIDLARELFDSMPLEDKNLISWNSMLGGFAQTKDGIGLALELFEKM-----PE 253
Query: 205 PSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASK 264
++ ++ + G ++ + KR D+ + +ID YAK G I A
Sbjct: 254 RDLVSWNTIIGGFAKCGRIEFAHSLFNRMPKR-----DVISWSNMIDGYAKLGDIKVART 308
Query: 265 LFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQK-VGLKPNRVTFLSVLNACSH 323
LF+++ K++V++ +I++G+A +G EA+E F MQ+ L P+ T + L+A S
Sbjct: 309 LFDEMP--DKDVVAFNTIMAGYAQNGYYTEALEIFHEMQRQSNLSPDETTLVVALSAISQ 366
Query: 324 GGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVW 383
G VE+ + + +E + K LIDM + G +E A G+ + D W
Sbjct: 367 LGHVEKAASMHNYFLENGISVTG-KVAVALIDMYSKCGSIENAILIFDGVDQKGID--HW 423
Query: 384 RTLLGACSFHGNVEMGERVTRKILEMER 411
++ + +G +G+ +LEM R
Sbjct: 424 NAMISGMARNG---LGKLAFGMLLEMHR 448
>gi|345505232|gb|AEN99840.1| chlororespiratory reduction 4, partial [Olimarabidopsis pumila]
Length = 579
Score = 245 bits (625), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 129/342 (37%), Positives = 203/342 (59%), Gaps = 4/342 (1%)
Query: 113 TALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVV 172
++++ YV G ++D+ LFD +P R++VTW MI G K G + A++LF++MP R+VV
Sbjct: 222 NSMIDGYVKHGRIEDAKDLFDMVPRRDVVTWATMIDGYAKLGFVHQAKTLFDQMPHRDVV 281
Query: 173 SWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGY 232
++ ++ GY + EAL +F M + P E T++ VL AI Q G + +H Y
Sbjct: 282 AYNSMMAGYVQNRFHMEALEIFSDMEKESHLSPDETTLVIVLSAIAQLGRLSKAMDMHLY 341
Query: 233 GEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMG 292
++ F ++ LID Y+KCG I A +FE I E K++ W ++I G A+HG+G
Sbjct: 342 IVEKQFL-LGGKLGVALIDMYSKCGSIQHAMLVFEGI--ENKSIDHWNAMIGGLAIHGLG 398
Query: 293 KEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGC 352
+ A + ++++ +KP+ +TF+ VLNACSH GLV+EGL F+ M + ++ P ++HYGC
Sbjct: 399 ESAFDMLLQIERRSIKPDDITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGC 458
Query: 353 LIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERG 412
++D+L R+G +E A+ +P E D V+WRT L ACS H E GE V + ++
Sbjct: 459 MVDILSRSGSIELAKNLIEEMPIEPND-VIWRTFLTACSHHKEFETGELVAKHLILQADY 517
Query: 413 YGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
YVL+ N+ A G + D R+R +M ER K+PGCS +
Sbjct: 518 NPSSYVLLSNMYASFGMWKDVRRVRTMMKERKIEKIPGCSWI 559
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 105/382 (27%), Positives = 198/382 (51%), Gaps = 28/382 (7%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNL 92
L+N ++ +S P++A LL+ + +I +P D F+ S +++ C+ L
Sbjct: 54 LWNAMIKSHSHGTDPRRALLLFCLMLEI------GVP--VDKFSLSLVMKACSRLGFVKG 105
Query: 93 GTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVK 152
G Q+H + K G S +++ L+ +Y+ G L + ++FD MP+R+ V++N MI G VK
Sbjct: 106 GLQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGFARQIFDRMPQRDSVSYNSMIDGYVK 165
Query: 153 WGELEFARSLFEEMP--CRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITI 210
G +E A LF+ MP +N++SW +I GY +++E + + K+ A E E I+
Sbjct: 166 CGSIESASELFDLMPREMKNLISWNSLISGYA---QTSEGVDIASKLFA-EMPEKDLISW 221
Query: 211 LAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDIS 270
+++ ++G ++ + + +R D+ +ID YAK G + A LF+ +
Sbjct: 222 NSMIDGYVKHGRIEDAKDLFDMVPRR-----DVVTWATMIDGYAKLGFVHQAKTLFDQMP 276
Query: 271 VERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVG-LKPNRVTFLSVLNACSHGGLVEE 329
+++V++ S+++G+ + EA+E F M+K L P+ T + VL+A + G + +
Sbjct: 277 --HRDVVAYNSMMAGYVQNRFHMEALEIFSDMEKESHLSPDETTLVIVLSAIAQLGRLSK 334
Query: 330 GLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGA 389
++ +VE+ + L K LIDM + G ++ A GI ++ D W ++G
Sbjct: 335 AMDMHLYIVEK-QFLLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSID--HWNAMIGG 391
Query: 390 CSFHGNVEMGERVTRKILEMER 411
+ HG +GE +L++ER
Sbjct: 392 LAIHG---LGESAFDMLLQIER 410
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 51/256 (19%), Positives = 102/256 (39%), Gaps = 40/256 (15%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+N+++ Y +A ++ +++ S L P D T ++ A L +
Sbjct: 283 YNSMMAGYVQNRFHMEALEIFSDMEK-----ESHLSP--DETTLVIVLSAIAQLGRLSKA 335
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
+H I + F + AL++MY G ++ + +F+ + +++ WN MI GL
Sbjct: 336 MDMHLYIVEKQFLLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAIH 395
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
G E A + ++ R++ +P +IT + V
Sbjct: 396 GLGESAFDMLLQIERRSI--------------------------------KPDDITFVGV 423
Query: 214 LPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVER 273
L A +G VK L ++ ++ C++D ++ G I A L E++ +E
Sbjct: 424 LNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDILSRSGSIELAKNLIEEMPIE- 482
Query: 274 KNLVSWTSIISGFAMH 289
N V W + ++ + H
Sbjct: 483 PNDVIWRTFLTACSHH 498
>gi|326522230|dbj|BAK04243.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 628
Score = 245 bits (625), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 145/433 (33%), Positives = 233/433 (53%), Gaps = 29/433 (6%)
Query: 35 NTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPN--- 91
N LL + P AF +++L PL P D ++++FL+R +L+
Sbjct: 83 NGLLRALARGPCPGLAFAAFREL---------PLAP--DHYSFTFLVRAATSLAAAASAT 131
Query: 92 ----------LGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLV 141
L +HA + G + +V + V+MY ++G + F E+ ++V
Sbjct: 132 PVPTDVAVNLLAGSVHAAAFQHGHATDPHVQSGAVSMYAAVGDVGAVRAAFAEIVSPDVV 191
Query: 142 TWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACE 201
M+ L G+++ AR LF+ MP R+ V+W ++ GY R+ RS EAL LF +M
Sbjct: 192 CVTAMLGALSAGGDVDTARELFDGMPQRDHVAWNAMLTGYVRVGRSREALGLFDEMQKAG 251
Query: 202 YTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFS 261
SE+T+++VL A Q G ++ +H Y RG + + L+D Y+KCG +
Sbjct: 252 VAV-SEVTLVSVLTACAQMGALERGMWVHSYVCSRGMR-VSVTLGTALVDMYSKCGVVTM 309
Query: 262 ASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNAC 321
+ ++FE ++ +N+ +WTS +SG AM+GMG+E +E F RM+ G++PN VTF++VL C
Sbjct: 310 SMEVFE--TMRERNIYTWTSALSGLAMNGMGEECLELFKRMESAGMEPNGVTFVAVLRGC 367
Query: 322 SHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVV 381
S GLVEEG FD M ++ +V P ++HYGC++D+ GRAGRL+ A +P E +
Sbjct: 368 SVAGLVEEGRACFDSMKDKHKVEPWLEHYGCMVDLYGRAGRLDDAVDFINSMPVEPHE-G 426
Query: 382 VWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMD 441
VW LL A H NV++G+ K+ E+E +VL+ NI A + ++R +M
Sbjct: 427 VWGALLNASRIHNNVDLGKHAMHKLTEIESKNDAAHVLLSNIYAESHNWKGVSKVRNMMK 486
Query: 442 ERNAFKVPGCSLV 454
+ K+PGCS +
Sbjct: 487 SKGVKKMPGCSAI 499
>gi|357483151|ref|XP_003611862.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355513197|gb|AES94820.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 663
Score = 244 bits (624), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 139/422 (32%), Positives = 234/422 (55%), Gaps = 15/422 (3%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+N++++ YS ++A L+++++Q++ L P D FT L+ + +LG
Sbjct: 203 WNSMINGYSKMGRSEEAVLMFREMQEV------GLEP--DVFTLVGLLSVSTKHGNFDLG 254
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
+H + G + V AL++MY G LK + +FD+M ++++V+W MI
Sbjct: 255 RFVHLHMVVTGIEIDSIVTNALMDMYAKCGNLKCAKSVFDQMLDKDVVSWTCMINAYANH 314
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEY-TEPSEITILA 212
G ++ A F +MP +NVVSW II + + EA+ LF +M C+ ++ T++A
Sbjct: 315 GLIDCALEFFNQMPGKNVVSWNSIIWCHVQEGLYAEAVDLFYRM--CDSGVMANDTTLVA 372
Query: 213 VLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVE 272
+L + GD+ + H Y T + N +ID YAKCG + +A +F +
Sbjct: 373 ILSSCSHMGDLALGKQAHSYIFDNNIT-LSATLCNAIIDMYAKCGALQTAMDVF--FGMP 429
Query: 273 RKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLN 332
KN VSW II A+HG GKEA+E F +MQ G+ P+ +TF +L+ACSH GLV+ G +
Sbjct: 430 EKNAVSWNVIIGALALHGYGKEAIEMFEKMQASGVCPDEITFTGLLSACSHSGLVDTGQH 489
Query: 333 FFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSF 392
+F+ M + PD++HY C++D+LGR G L +A +P + DVVVW LLGAC
Sbjct: 490 YFEIMNLTFGISPDVEHYACMVDLLGRRGLLGEAISLIKKMPVK-PDVVVWSALLGACRT 548
Query: 393 HGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCS 452
+GN+ +G+++ +++LE+ R G YVL+ N+ + R+ D + + +++D+ K S
Sbjct: 549 YGNLAIGKQIMKQLLELGRYNSGLYVLLSNMYSESQRWDDMKNIWKILDQNGIKKCRAIS 608
Query: 453 LV 454
+
Sbjct: 609 FI 610
Score = 147 bits (372), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 117/407 (28%), Positives = 183/407 (44%), Gaps = 85/407 (20%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNL 92
+FN L+ YS + P K+ LLY+++ LP + FT F+++ CA S L
Sbjct: 101 MFNHLIKGYSNSSDPIKSLLLYRRMV-----CDGILP---NQFTIPFVLKACAAKSCYWL 152
Query: 93 GTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVK 152
G +HA K+G SH V A++N+YV+ G + + ++FD++ ER LV+WN MI G K
Sbjct: 153 GVCVHAQSFKLGMGSHACVQNAILNIYVACGLITSARRVFDDISERTLVSWNSMINGYSK 212
Query: 153 WGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILA 212
M RS EA+ +FR+M EP T++
Sbjct: 213 -------------------------------MGRSEEAVLMFREMQEVG-LEPDVFTLVG 240
Query: 213 VLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFE----- 267
+L ++G+ + +H + G D V N L+D YAKCG + A +F+
Sbjct: 241 LLSVSTKHGNFDLGRFVHLHMVVTGIE-IDSIVTNALMDMYAKCGNLKCAKSVFDQMLDK 299
Query: 268 ------------------DISVE------RKNLVSWTSIISGFAMHGMGKEAVENFGRMQ 303
D ++E KN+VSW SII G+ EAV+ F RM
Sbjct: 300 DVVSWTCMINAYANHGLIDCALEFFNQMPGKNVVSWNSIIWCHVQEGLYAEAVDLFYRMC 359
Query: 304 KVGLKPNRVTFLSVLNACSHGGLVEEGLN----FFDKMVEECEVLPDIKHYGCLIDMLGR 359
G+ N T +++L++CSH G + G FD + L + +IDM +
Sbjct: 360 DSGVMANDTTLVAILSSCSHMGDLALGKQAHSYIFDNNITLSATLCN-----AIIDMYAK 414
Query: 360 AGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHG----NVEMGERV 402
G L+ A G+P + + V W ++GA + HG +EM E++
Sbjct: 415 CGALQTAMDVFFGMPEK--NAVSWNVIIGALALHGYGKEAIEMFEKM 459
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 79/263 (30%), Positives = 135/263 (51%), Gaps = 15/263 (5%)
Query: 139 NLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMV 198
++T +++ V+ +L +A LF+++P N + +I GY+ + ++L L+R+MV
Sbjct: 67 QVLTLGKLVSSSVQLRDLRYAHKLFDQIPQPNKFMFNHLIKGYSNSSDPIKSLLLYRRMV 126
Query: 199 ACEYTEPSEITILAVLPAIWQNGDVKSCQ----LIHGYGEKRGFTAFDIRVLNCLIDTYA 254
C+ P++ TI VL A KSC +H K G + V N +++ Y
Sbjct: 127 -CDGILPNQFTIPFVLKAC----AAKSCYWLGVCVHAQSFKLGMGSHAC-VQNAILNIYV 180
Query: 255 KCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTF 314
CG I SA ++F+DIS + LVSW S+I+G++ G +EAV F MQ+VGL+P+ T
Sbjct: 181 ACGLITSARRVFDDIS--ERTLVSWNSMINGYSKMGRSEEAVLMFREMQEVGLEPDVFTL 238
Query: 315 LSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIP 374
+ +L+ + G + G MV + I L+DM + G L+ A+ +
Sbjct: 239 VGLLSVSTKHGNFDLGRFVHLHMVVTGIEIDSIV-TNALMDMYAKCGNLKCAKSVFDQML 297
Query: 375 SEITDVVVWRTLLGACSFHGNVE 397
+ DVV W ++ A + HG ++
Sbjct: 298 DK--DVVSWTCMINAYANHGLID 318
>gi|449441061|ref|XP_004138302.1| PREDICTED: pentatricopeptide repeat-containing protein At1g59720,
mitochondrial-like [Cucumis sativus]
gi|449477575|ref|XP_004155061.1| PREDICTED: pentatricopeptide repeat-containing protein At1g59720,
mitochondrial-like [Cucumis sativus]
Length = 506
Score = 244 bits (624), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 152/424 (35%), Positives = 228/424 (53%), Gaps = 50/424 (11%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNL 92
L+NT++ + AF YK++ + + D+FT+SFL++ L L
Sbjct: 122 LWNTMIRGFGRNRKLLMAFEFYKRMLEKGIAA--------DNFTFSFLLKMTGQLGSIML 173
Query: 93 GTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVK 152
G QLH I K+G SHVYV L++MY G LKD
Sbjct: 174 GKQLHVNILKLGLDSHVYVRNTLIHMY---GRLKD------------------------- 205
Query: 153 WGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILA 212
+ AR+LF+E+P ++V+W +ID + NEAL LF +M+ EP E T++
Sbjct: 206 ---VNIARNLFDELPKTDLVAWNAVIDCHVSCGMYNEALDLFVQMLQSG-VEPDEATLVV 261
Query: 213 VLPAIWQNGDVKSCQLIHGY--GEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDIS 270
+ A G + + +H + RG T I V N LID YAKCG + A ++F +
Sbjct: 262 TISACSALGALDCGRWVHSHVNSNDRGKT---IAVFNSLIDMYAKCGAVEYAREMFN--A 316
Query: 271 VERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLK-PNRVTFLSVLNACSHGGLVEE 329
V KN+V+W ++I G A HG ++A+ F M ++ P+ VTFL+VL AC++GG VEE
Sbjct: 317 VSGKNIVTWNTMIMGLATHGDAEDALTLFSNMLAERVETPDGVTFLAVLCACNYGGKVEE 376
Query: 330 GLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGA 389
G +FD M + + P +KHYG ++D+LGRAG +E+A + +P E + V+WRTLL A
Sbjct: 377 GRRYFDLMTKHFNIQPTLKHYGSMVDILGRAGFVEEAYQLIKSMPME-CNAVIWRTLLAA 435
Query: 390 CSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKV- 448
C HGNVE+GERV+ +LE+ + DYVL+ N+ A G++ + + R+ M + K
Sbjct: 436 CQMHGNVELGERVSSHVLEIVADHSSDYVLLANMYASSGQWNEMIKTRKSMHRKGVEKPE 495
Query: 449 PGCS 452
PG S
Sbjct: 496 PGNS 499
>gi|242045040|ref|XP_002460391.1| hypothetical protein SORBIDRAFT_02g027420 [Sorghum bicolor]
gi|241923768|gb|EER96912.1| hypothetical protein SORBIDRAFT_02g027420 [Sorghum bicolor]
Length = 573
Score = 244 bits (624), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 132/384 (34%), Positives = 214/384 (55%), Gaps = 5/384 (1%)
Query: 73 DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGF-QSHVYVNTALVNMYVSLGFLKDSSKL 131
D Y + +CA QLHA +K GF SH V LV+ Y G L + ++
Sbjct: 77 DPAAYELALASCARGKDRATAAQLHAHAAKRGFLASHRRVRCRLVHAYAVCGMLPHARRV 136
Query: 132 FDEMPERNLVTWNVMITGLVK-WGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEA 190
FD + ++V WN ++ G + G+ + R F MP R+ VSW ++ +EA
Sbjct: 137 FDGGTDNDMVAWNCLLRGYAQEGGDADLLRDFFARMPSRDSVSWNTVLSLCVVNGEYDEA 196
Query: 191 LALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLI 250
+A+FR+M+A + +P +T+++V+ AI G + H Y ++G + ++ + LI
Sbjct: 197 IAVFREMLASQECQPDRVTLVSVVSAIAYLGALAQGLWAHAYVIRKGVE-VEEKLSSALI 255
Query: 251 DTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPN 310
+ Y+KCG + A +F+++ +R +L +W ++++GF +G A+ F RM+ GL PN
Sbjct: 256 NMYSKCGFLEGAVYVFDNVRGKR-SLDTWNAMLAGFTANGCSGRALALFTRMETTGLMPN 314
Query: 311 RVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTA 370
++TF +LNACSHGGLVEEG+ F +M + PDI HYGC++D+ RAG E+AE+
Sbjct: 315 KITFNCILNACSHGGLVEEGMRCFQRMSRVYGIEPDIAHYGCMVDLFCRAGMFEKAEEII 374
Query: 371 LGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRF 430
+P E D + + LLGAC H N+E+G++ +++E YVL+ NI A G +
Sbjct: 375 QIMPME-PDASMLKALLGACRTHKNLELGKKAGHRLIEAAPNDHAGYVLLSNIYALDGNW 433
Query: 431 GDAERLRRVMDERNAFKVPGCSLV 454
G ++R++M +R K PG S V
Sbjct: 434 GRVHKVRKLMLDRGVLKTPGSSSV 457
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 81/179 (45%), Gaps = 12/179 (6%)
Query: 190 ALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCL 249
AL LF ++ +P L + + D + +H + KRGF A RV L
Sbjct: 62 ALRLFDHLLR-SGADPDPAAYELALASCARGKDRATAAQLHAHAAKRGFLASHRRVRCRL 120
Query: 250 IDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVEN-FGRMQKVGLK 308
+ YA CG + A ++F+ + ++V+W ++ G+A G + + + F RM
Sbjct: 121 VHAYAVCGMLPHARRVFDGGT--DNDMVAWNCLLRGYAQEGGDADLLRDFFARM------ 172
Query: 309 PNR--VTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQ 365
P+R V++ +VL+ C G +E + F +M+ E PD ++ + G L Q
Sbjct: 173 PSRDSVSWNTVLSLCVVNGEYDEAIAVFREMLASQECQPDRVTLVSVVSAIAYLGALAQ 231
>gi|108862877|gb|ABA99065.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 491
Score = 244 bits (624), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 147/446 (32%), Positives = 221/446 (49%), Gaps = 65/446 (14%)
Query: 70 PLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSS 129
P DSFTYSFLI+ + + +H+ + K+G +V AL++ Y G D+
Sbjct: 2 PRRDSFTYSFLIKALSAAGVAPV-RAVHSHVVKLGSVEDTFVGNALIDAYSKNGGFSDAR 60
Query: 130 K-------------------------------LFDEMPERNLVTWNVMITGLVKWGELEF 158
K LFDEMPE++ V+WN ++ G K GE+E
Sbjct: 61 KVFDEMPERDVVSWNTAMAAMVREGELAGVRKLFDEMPEKDTVSWNTILDGYTKAGEVEA 120
Query: 159 ARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKM------------VACEY---- 202
A LF+ MP RNVVSW+ ++ GY + A +F KM AC
Sbjct: 121 AFELFQRMPERNVVSWSTMVSGYCKKGDLEMARVIFDKMPSKNLVTWTIMVSACAQKGLV 180
Query: 203 --------------TEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNC 248
E ++++L A ++G + + IH Y KR V N
Sbjct: 181 DEAGKLFAQMKEASVELDVAAVVSILAACAESGSLSLGKRIHRYVRKRNL-GRSTHVCNA 239
Query: 249 LIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLK 308
LID + KCGC+ A +F+ +V+ K+ VSW SII GFAMHG G +A+E F +M++ G
Sbjct: 240 LIDMFCKCGCVNRADYVFDTETVQ-KDSVSWNSIIGGFAMHGHGDKALELFAQMKQQGFN 298
Query: 309 PNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEK 368
P+ VT ++VL+AC+H G V+EG F M + ++P I+HYGC+ID+LGR G +++A
Sbjct: 299 PDAVTMINVLSACTHMGFVDEGRRHFSNMERDYGIMPQIEHYGCMIDLLGRGGLIKEAVD 358
Query: 369 TALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVG 428
+P E + V+W +LL AC H NVE E ++ +++ G+Y ++ NI A G
Sbjct: 359 LIKSMPWEPNE-VIWGSLLSACRLHKNVEYAEIAVNELSKLQPSNAGNYAVLSNIYAEAG 417
Query: 429 RFGDAERLRRVMDERNAFKVPGCSLV 454
++ D + R M + K G S V
Sbjct: 418 QWSDMAKARMQMKGTGSQKTAGSSWV 443
>gi|91806359|gb|ABE65907.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 555
Score = 244 bits (624), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 152/487 (31%), Positives = 254/487 (52%), Gaps = 76/487 (15%)
Query: 31 SQLFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHP 90
S L N+++ Y +F LY+ L++ + P D+FT++ L ++C+
Sbjct: 42 SFLSNSMIKAYLETRQYPDSFALYRDLRK-----ETCFAP--DNFTFTTLTKSCSLSMCV 94
Query: 91 NLGTQLHAVISKVGFQSHVYVNT-------------------------------ALVNMY 119
G QLH+ I + GF + +YV+T AL++ Y
Sbjct: 95 YQGLQLHSQIWRFGFCADMYVSTGVVDMYAKFGKMGCARNAFDEMPHRSEVSWTALISGY 154
Query: 120 VSLGFLKDSSKLFDEMPE-RNLVTWNVMITGLVKWGELEFARSLFEEM------------ 166
+ G L +SKLFD+MP +++V +N M+ G VK G++ AR LF+EM
Sbjct: 155 IRCGELDLASKLFDQMPHVKDVVIYNAMMDGFVKSGDMTSARRLFDEMTHKTVITWTTMI 214
Query: 167 -------------------PCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSE 207
P RN+VSW +I GY + + E + LF++M A +P +
Sbjct: 215 HGYCNIKDIDAARKLFDAMPERNLVSWNTMIGGYCQNKQPQEGITLFQEMQATTSLDPDD 274
Query: 208 ITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFE 267
+TIL+VLPAI G + + H + +++ ++V ++D Y+KCG I A ++F+
Sbjct: 275 VTILSVLPAISDTGALSLGEWCHCFVQRKKLDK-KVKVCTAILDMYSKCGEIEKAKRIFD 333
Query: 268 DISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLV 327
++ K + SW ++I G+A++G + A++ F M + KP+ +T L+V+ AC+HGGLV
Sbjct: 334 EMP--EKQVASWNAMIHGYALNGNARAALDLFVTMM-IEEKPDEITMLAVITACNHGGLV 390
Query: 328 EEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLL 387
EEG +F M E + I+HYGC++D+LGRAG L++AE +P E +++ + L
Sbjct: 391 EEGRKWFHVM-REMGLNAKIEHYGCMVDLLGRAGSLKEAEDLITNMPFEPNGIIL-SSFL 448
Query: 388 GACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFK 447
AC + ++E ER+ +K +E+E G+YVL+ N+ A R+ D ++ VM + A K
Sbjct: 449 SACGQYKDIERAERILKKAVELEPQNDGNYVLLRNLYAADKRWDDFGMVKNVMRKNQAKK 508
Query: 448 VPGCSLV 454
GCSL+
Sbjct: 509 EVGCSLI 515
>gi|326522488|dbj|BAK07706.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 799
Score = 244 bits (624), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 137/378 (36%), Positives = 219/378 (57%), Gaps = 6/378 (1%)
Query: 77 YSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMP 136
+S ++ CATL G ++HA K+G ++V+V+++L++MY +D+ +FD +P
Sbjct: 385 FSSVLSACATLEDLRGGARIHARSLKMGSSTNVFVSSSLIDMYCKCKKCRDAQTIFDTLP 444
Query: 137 ERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRK 196
E+N+V WN + +G G++ A LF++MP RN+ SW II GY + + +AL F
Sbjct: 445 EKNIVCWNSLASGYSYNGKMVEAMYLFKKMPARNLASWNTIISGYAQNRQFVDALRSFNA 504
Query: 197 MVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKC 256
M+A P EIT +VL A + + ++ H K G I + L D YAK
Sbjct: 505 MLASGQV-PGEITFSSVLLACANLCSLVTGKMAHAKTIKLGMEE-SIFIGTALSDMYAKS 562
Query: 257 GCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLS 316
G + S+ ++F + +N V+WT++I G A +G+ +E++ F M G+ PN TFL+
Sbjct: 563 GDLQSSKRMF--YQMPERNDVTWTAMIQGLAENGLAEESILLFEDMMATGMTPNEHTFLA 620
Query: 317 VLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSE 376
+L ACSHGGLVE+ +++F+KM + + P KHY C++D+L RAGRL +AE + PS+
Sbjct: 621 LLFACSHGGLVEQAIHYFEKM-QAWGISPKEKHYTCMVDVLARAGRLIEAEALLMKTPSK 679
Query: 377 ITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERL 436
++ W LL AC+ + N E+GER +++ E+ + YVL+ N+ A GR+ DA R+
Sbjct: 680 -SEANSWAALLSACNTYKNEEIGERAAKRLHELGKDNTAGYVLLSNMYASCGRWKDAARI 738
Query: 437 RRVMDERNAFKVPGCSLV 454
R +M K GCS V
Sbjct: 739 RVLMKGTTLKKDGGCSWV 756
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/311 (26%), Positives = 142/311 (45%), Gaps = 33/311 (10%)
Query: 115 LVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSW 174
+V+ +V G + + LFD MPER++V++ M+ L+K G + A L+E+ P +V +
Sbjct: 158 MVHEHVKAGDIASARGLFDGMPERSVVSYTTMVDALMKRGRVAEAVELYEQCPSGSVAFF 217
Query: 175 TGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGE 234
T I G+ R + AL +FRKMV+C P+ IT + ++ A G+ I G
Sbjct: 218 TATISGFVRNELHHNALGVFRKMVSCG-VRPNGITFVCMIKACVGAGEFGLAMSIVGSAI 276
Query: 235 KRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVE---------------------- 272
K F I V N LI Y + G +A K+F+++ V+
Sbjct: 277 KSNFFESSIEVQNSLITLYLRMGDAAAARKVFDEMDVKDVVSWTALLDVYSESGDLDGAR 336
Query: 273 -------RKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGG 325
+N VSW ++I+ G EAV+ + +M G +PN F SVL+AC+
Sbjct: 337 RVLDAMPERNEVSWGTLIARHEQRGNAAEAVKLYSQMLADGCRPNISCFSSVLSACATLE 396
Query: 326 LVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRT 385
+ G + ++ ++ LIDM + + A+ +P + ++V W +
Sbjct: 397 DLRGGARIHARSLKMGSS-TNVFVSSSLIDMYCKCKKCRDAQTIFDTLPEK--NIVCWNS 453
Query: 386 LLGACSFHGNV 396
L S++G +
Sbjct: 454 LASGYSYNGKM 464
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 89/355 (25%), Positives = 162/355 (45%), Gaps = 35/355 (9%)
Query: 73 DSFTYSFLIRTCATLSHPNLGTQL-HAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKL 131
+ T+ +I+ C L + + I F+S + V +L+ +Y+ +G + K+
Sbjct: 248 NGITFVCMIKACVGAGEFGLAMSIVGSAIKSNFFESSIEVQNSLITLYLRMGDAAAARKV 307
Query: 132 FDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEAL 191
FDEM +++V+W ++ + G+L+ AR + + MP RN VSW +I + + + EA+
Sbjct: 308 FDEMDVKDVVSWTALLDVYSESGDLDGARRVLDAMPERNEVSWGTLIARHEQRGNAAEAV 367
Query: 192 ALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLID 251
L+ +M+A + P+ +VL A D++ IH K G ++ ++ V + LID
Sbjct: 368 KLYSQMLA-DGCRPNISCFSSVLSACATLEDLRGGARIHARSLKMG-SSTNVFVSSSLID 425
Query: 252 TYAKCGCIFSASKLFEDI-----------------------------SVERKNLVSWTSI 282
Y KC A +F+ + + +NL SW +I
Sbjct: 426 MYCKCKKCRDAQTIFDTLPEKNIVCWNSLASGYSYNGKMVEAMYLFKKMPARNLASWNTI 485
Query: 283 ISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECE 342
ISG+A + +A+ +F M G P +TF SVL AC++ + G K + +
Sbjct: 486 ISGYAQNRQFVDALRSFNAMLASGQVPGEITFSSVLLACANLCSLVTGKMAHAKTI-KLG 544
Query: 343 VLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVE 397
+ I L DM ++G L+ +++ +P E D V W ++ + +G E
Sbjct: 545 MEESIFIGTALSDMYAKSGDLQSSKRMFYQMP-ERND-VTWTAMIQGLAENGLAE 597
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 96/215 (44%), Gaps = 42/215 (19%)
Query: 75 FTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDE 134
T+S ++ CA L G HA K+G + +++ TAL +MY G L+ S ++F +
Sbjct: 515 ITFSSVLLACANLCSLVTGKMAHAKTIKLGMEESIFIGTALSDMYAKSGDLQSSKRMFYQ 574
Query: 135 MPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALF 194
MPERN VTW MI GL + G E E++ LF
Sbjct: 575 MPERNDVTWTAMIQGLAENGLAE-------------------------------ESILLF 603
Query: 195 RKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDI----RVLNCLI 250
M+A T P+E T LA+L A G V+ Q IH Y EK A+ I + C++
Sbjct: 604 EDMMATGMT-PNEHTFLALLFACSHGGLVE--QAIH-YFEK--MQAWGISPKEKHYTCMV 657
Query: 251 DTYAKCGCIFSASKLFEDISVERKNLVSWTSIISG 285
D A+ G + A L + + SW +++S
Sbjct: 658 DVLARAGRLIEAEALLMK-TPSKSEANSWAALLSA 691
>gi|297599623|ref|NP_001047477.2| Os02g0625100 [Oryza sativa Japonica Group]
gi|125582938|gb|EAZ23869.1| hypothetical protein OsJ_07586 [Oryza sativa Japonica Group]
gi|255671102|dbj|BAF09391.2| Os02g0625100 [Oryza sativa Japonica Group]
Length = 493
Score = 244 bits (624), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 138/418 (33%), Positives = 221/418 (52%), Gaps = 39/418 (9%)
Query: 71 LFDSFTYSFLIRTCATL-SHPNLGTQLHAVISKVGFQSHVYVN----------------- 112
L D + SF + C+ L SHP + + +H++ ++G VYV
Sbjct: 68 LPDHLSLSFSLHPCSRLPSHP-VASVVHSLAVRLGHARDVYVVNAAASAYFAAADVASAE 126
Query: 113 ----------------TALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGEL 156
T +V + + G ++ + FD MPE+N+V+WN M+ + G L
Sbjct: 127 RLFSEASRDVADVVTWTTMVTGHANAGDVERARWFFDAMPEKNVVSWNTMLGAYARAGML 186
Query: 157 EFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPA 216
AR LF+ MP RN +W +I G + + EAL +F MVA P+E +++ + A
Sbjct: 187 PKARKLFDRMPSRNAATWGSMITGLLQSDHCEEALRVFSDMVASGVV-PNEPALVSTVSA 245
Query: 217 IWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNL 276
Q ++ +HGY E+ A + ++D Y KCG I A ++F + V +N+
Sbjct: 246 CTQLRWMEHGTWVHGYAERELNGAMSAVLATAIVDMYGKCGSIRDAVRVFAAMPV--RNI 303
Query: 277 VSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDK 336
SW S+I+G AM+G ++A+ F +MQ G++PN +TF+ +L+ACSH GLV+EG F K
Sbjct: 304 YSWNSMIAGLAMNGSERQALSLFWKMQLAGVRPNDITFIGLLSACSHSGLVDEGRWLFYK 363
Query: 337 MVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNV 396
MV + P +HYG ++D+LGR+G + +A +P E +W L GAC HG V
Sbjct: 364 MVNHFGIQPVPEHYGLMVDLLGRSGHVREAVDFVKSMPVE-PHPGLWGALAGACKIHGEV 422
Query: 397 EMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
E+GE V +K++E+E +G Y+L+ NI A R+ D +RR++ +R K G ++V
Sbjct: 423 ELGEEVAKKLIELEPQHGSRYILLSNIYATSNRWDDMANVRRILKDRKVPKGTGNAIV 480
>gi|125526069|gb|EAY74183.1| hypothetical protein OsI_02067 [Oryza sativa Indica Group]
Length = 657
Score = 244 bits (624), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 128/374 (34%), Positives = 209/374 (55%), Gaps = 4/374 (1%)
Query: 80 LIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERN 139
L++ C+ S + G QLH VI K GF +H +V L++ Y S F+ S F + +
Sbjct: 282 LVKACSRHSAVSEGQQLHTVILKNGFDAHAFVQATLIHYYGSCDFIDHSQMQFKLSDKSH 341
Query: 140 LVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVA 199
+ +WN ++ L++ + AR LF++MP R+ +SW+ +I GY + SN AL +F M+
Sbjct: 342 VASWNALMASLLRRNLVHEARQLFDDMPERDTISWSTLISGYVQSGNSNMALQIFCSMLD 401
Query: 200 CEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCI 259
EP+EIT+ + L A+ +G + + IH Y R D ++ LI+ YAKCG I
Sbjct: 402 AG-VEPNEITLASALSAVANSGTLGQARWIHDYIISRSIQLTD-KLSAGLINVYAKCGSI 459
Query: 260 FSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQK-VGLKPNRVTFLSVL 318
A +LF + + ++ W SII A+HG ++E F ++Q +KPN +T+L VL
Sbjct: 460 AEAVQLFNHVKDKSISVSPWNSIICNLAIHGYVNMSLELFSQLQSTTNIKPNSITYLGVL 519
Query: 319 NACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEIT 378
NAC H G+V EG F+ M ++ + P+IKHYGC++D+L RAG LE+AE +P +
Sbjct: 520 NACCHAGMVAEGKRQFESMRQQYGIQPEIKHYGCMVDLLCRAGYLEEAELLIKTMPMK-A 578
Query: 379 DVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRR 438
DVV W +L A GNV +GE+ ++ +++ +G + + N+ A G + + +R+
Sbjct: 579 DVVAWGCILAAARTQGNVALGEKAAEELSKLDPSHGASKIALSNLYADAGHWSNVSVVRK 638
Query: 439 VMDERNAFKVPGCS 452
+ N ++ G S
Sbjct: 639 ELQNENLERLTGSS 652
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/333 (25%), Positives = 148/333 (44%), Gaps = 35/333 (10%)
Query: 97 HAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGEL 156
H V + G V V T LV+ Y ++ + + +F+ MP+RN VTWN M+ VK G +
Sbjct: 166 HGVAVRRGLDGFVIVATNLVHAYGAVSQVPSARSIFELMPDRNTVTWNTMLNCYVKAGMI 225
Query: 157 EFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPA 216
A +F +P R+ VSW +IDGY + +AL + MV +E+ ++ ++ A
Sbjct: 226 NMAAEVFGVIPERDEVSWLTMIDGYMCADFLLQALRTYVAMVGTVGIRANEVILVGLVKA 285
Query: 217 IWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKC-------------------- 256
++ V Q +H K GF A V LI Y C
Sbjct: 286 CSRHSAVSEGQQLHTVILKNGFDAHAF-VQATLIHYYGSCDFIDHSQMQFKLSDKSHVAS 344
Query: 257 -----------GCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKV 305
+ A +LF+D+ ++ +SW+++ISG+ G A++ F M
Sbjct: 345 WNALMASLLRRNLVHEARQLFDDM--PERDTISWSTLISGYVQSGNSNMALQIFCSMLDA 402
Query: 306 GLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQ 365
G++PN +T S L+A ++ G + + D ++ L D K LI++ + G + +
Sbjct: 403 GVEPNEITLASALSAVANSGTLGQARWIHDYIISRSIQLTD-KLSAGLINVYAKCGSIAE 461
Query: 366 AEKTALGIPSEITDVVVWRTLLGACSFHGNVEM 398
A + + + V W +++ + HG V M
Sbjct: 462 AVQLFNHVKDKSISVSPWNSIICNLAIHGYVNM 494
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 113/437 (25%), Positives = 183/437 (41%), Gaps = 86/437 (19%)
Query: 75 FTYSFLIRTCATLSHPNLGTQLHAVISKVGF-QSHVYVNTALVNMYV----SLGFLKDSS 129
F S L A LSH G QLHA+ +K G S+++V +L+ Y SL +
Sbjct: 12 FLVSSLKSAAARLSH---GEQLHALAAKSGLLTSNLFVRNSLLAFYSRVAPSLAY----- 63
Query: 130 KLFDEMPE--RNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRS 187
LFDE+P R+ N++++ L + G LE A+ L EMP R+ VS+T +I +R
Sbjct: 64 HLFDEIPPLLRDATAHNILLSALARAGRLERAQCLLAEMPQRDAVSFTTVISALSRSGHP 123
Query: 188 NEALALFRKMVACEYTEPSEITILAVLPAIW-QNGDVKSCQLIHGYGEKRGFTAFDIRVL 246
ALA+FR M+ E +P+E+T+ VL A+ +G HG +RG F I
Sbjct: 124 ERALAVFRDMLT-EAVQPNEVTLAEVLTAMACDHGAPAPVGAAHGVAVRRGLDGFVIVAT 182
Query: 247 NCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQK-- 304
N L+ Y + SA +FE + +N V+W ++++ + GM A E FG + +
Sbjct: 183 N-LVHAYGAVSQVPSARSIFE--LMPDRNTVTWNTMLNCYVKAGMINMAAEVFGVIPERD 239
Query: 305 ------------------------------VGLKPNRVTFLSVLNACSHGGLVEEGL--- 331
VG++ N V + ++ ACS V EG
Sbjct: 240 EVSWLTMIDGYMCADFLLQALRTYVAMVGTVGIRANEVILVGLVKACSRHSAVSEGQQLH 299
Query: 332 -----NFFD----------------KMVEECEV---LPDIKH---YGCLIDMLGRAGRLE 364
N FD ++ ++ L D H + L+ L R +
Sbjct: 300 TVILKNGFDAHAFVQATLIHYYGSCDFIDHSQMQFKLSDKSHVASWNALMASLLRRNLVH 359
Query: 365 QAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNIL 424
+A + +P D + W TL+ GN M ++ +L+ G + + + + L
Sbjct: 360 EARQLFDDMPER--DTISWSTLISGYVQSGNSNMALQIFCSMLDA--GVEPNEITLASAL 415
Query: 425 AGVGRFGDAERLRRVMD 441
+ V G + R + D
Sbjct: 416 SAVANSGTLGQARWIHD 432
>gi|449435190|ref|XP_004135378.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g77170-like [Cucumis sativus]
Length = 609
Score = 244 bits (624), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 150/442 (33%), Positives = 239/442 (54%), Gaps = 46/442 (10%)
Query: 16 QIHSHLLTTNSLLHHSQLF--NTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFD 73
QIH+H+L TN L +H F N ++ Y+ E P+ A +Y + + LP D
Sbjct: 207 QIHAHVLRTNMLENHPSSFYWNIIIRSYTRLEVPRIALFVYIDMLRA-----GILP---D 258
Query: 74 SFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFD 133
+T + + + +LG QLH+V ++GF+ Y + L+++Y
Sbjct: 259 CYTLPIVFKALSLAYAFDLGLQLHSVAIRLGFEFDQYSESGLISLYS------------- 305
Query: 134 EMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALAL 193
K G+LE A +FE+ R + SW II G ++ R+ EA+ +
Sbjct: 306 ------------------KIGDLECACKVFEQNHNRKLGSWNAIIAGLSQGGRAKEAVNM 347
Query: 194 FRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTA-FDIRVLNCLIDT 252
F K+ EP + TI++V A G+++ +H + + T +I +LN LID
Sbjct: 348 FIKLRQSG-LEPDDFTIVSVTSACGSLGNLELSLQMHKFVFQVKVTGKSNILMLNSLIDM 406
Query: 253 YAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRV 312
Y KCG + A K+F ++ +N+ SWTS+I G+AMHG K+A+ENF M++ G+ PN+V
Sbjct: 407 YGKCGRMDLAMKVFSNMG--HRNVSSWTSLIVGYAMHGQVKQALENFQFMREAGVPPNQV 464
Query: 313 TFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALG 372
TF+ VL+AC HGG++ EG ++FD M P + HYGC++D+L +AG LE+A +
Sbjct: 465 TFVGVLSACVHGGMINEGKHYFDMMKNVYGFKPQLPHYGCMVDLLSKAGLLEEARRMIEE 524
Query: 373 IPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGD 432
+P + + ++W L+G C HGNVE+GE + + E+E G YV++ NI A G + +
Sbjct: 525 MPMK-ANSIIWGCLIGGCEKHGNVEIGEWAGKHLQELEPWNDGVYVVLSNIYATNGMWKE 583
Query: 433 AERLRRVMDERNAFKVPGCSLV 454
A+++R VM +R KVPG SL
Sbjct: 584 AQKMRDVMKQRQLAKVPGYSLA 605
>gi|15240281|ref|NP_198573.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170664|sp|Q9FHR3.1|PP403_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g37570
gi|9757967|dbj|BAB08303.1| unnamed protein product [Arabidopsis thaliana]
gi|332006824|gb|AED94207.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 550
Score = 244 bits (624), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 142/444 (31%), Positives = 225/444 (50%), Gaps = 66/444 (14%)
Query: 73 DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNT------------------- 113
D +T+ +++ C+ +G+ +H ++ ++GF V V T
Sbjct: 109 DEYTFPLVMKVCSNNGQVRVGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVF 168
Query: 114 ------------ALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARS 161
ALV YV G L+++ +FD MPERNL +WN ++ GLVK G+L A+
Sbjct: 169 GEMPERNAVSWTALVVAYVKSGELEEAKSMFDLMPERNLGSWNALVDGLVKSGDLVNAKK 228
Query: 162 LFEEMPCRNVVSWTGIIDGYTR-------------------------------MNRSNEA 190
LF+EMP R+++S+T +IDGY + + NEA
Sbjct: 229 LFDEMPKRDIISYTSMIDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEA 288
Query: 191 LALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLI 250
+F +M A + +P E ++ ++ A Q G + C+ + Y +R V+ LI
Sbjct: 289 FKVFSEMCA-KNVKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFSSHYVVPALI 347
Query: 251 DTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPN 310
D AKCG + A+KLFE++ +++LVS+ S++ G A+HG G EA+ F +M G+ P+
Sbjct: 348 DMNAKCGHMDRAAKLFEEMP--QRDLVSYCSMMEGMAIHGCGSEAIRLFEKMVDEGIVPD 405
Query: 311 RVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTA 370
V F +L C LVEEGL +F+ M ++ +L HY C++++L R G+L++A +
Sbjct: 406 EVAFTVILKVCGQSRLVEEGLRYFELMRKKYSILASPDHYSCIVNLLSRTGKLKEAYELI 465
Query: 371 LGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRF 430
+P E W +LLG CS HGN E+ E V R + E+E G YVL+ NI A + R+
Sbjct: 466 KSMPFE-AHASAWGSLLGGCSLHGNTEIAEVVARHLFELEPQSAGSYVLLSNIYAALDRW 524
Query: 431 GDAERLRRVMDERNAFKVPGCSLV 454
D LR M+E K+ G S +
Sbjct: 525 TDVAHLRDKMNENGITKICGRSWI 548
>gi|449487105|ref|XP_004157498.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 555
Score = 244 bits (623), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 148/439 (33%), Positives = 240/439 (54%), Gaps = 28/439 (6%)
Query: 31 SQLFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHP 90
+ ++N ++ ++ +++ +K+ L+K++ + + FTYSFL+ C
Sbjct: 90 TTVWNQIIKGHTRSKTSKKSIELFKRMTLAGVEA--------NGFTYSFLLSACVRSRLF 141
Query: 91 NLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGF-----LKDSSKLFDEMPERNLVTWNV 145
G Q+H + G+ S++YV T L+N+Y + G LK + LFDEMP+ N+V WN
Sbjct: 142 REGEQIHGRVLVNGYWSNLYVRTNLINLYANGGDGGDFDLKRARYLFDEMPDSNVVGWNS 201
Query: 146 MITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEP 205
++ G V+ G+ + AR +F+EMP RNV +WT ++ G+ + + AL+LF +M E
Sbjct: 202 LLAGYVRRGDFDGARKVFDEMPERNVRTWTIMVAGFAQNGQCKLALSLFDQMRRAG-VEL 260
Query: 206 SEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVL----NCLIDTYAKCGCIFS 261
++ ++A L A + GD+ + IHGY E R + + + VL N LI YA CG +
Sbjct: 261 DQVALVAALSACAELGDLTLGKWIHGYVE-RTWRSRHLPVLVSLNNALIHMYASCGVMDL 319
Query: 262 ASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVG---LKPNRVTFLSVL 318
A K+FE+I ++N VSW+SII+GFA G G EA+ F M G ++P+ +TF+ L
Sbjct: 320 AYKVFEEIP--QRNTVSWSSIITGFAKQGCGVEAIRIFQLMLCSGQNEVRPDEITFIGAL 377
Query: 319 NACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEIT 378
ACSH GL+ +G+ F M + V+P I+HYGC++D+L RAG L +A +P +
Sbjct: 378 TACSHAGLISDGIRLFQSMHKTFGVIPQIEHYGCMVDLLSRAGLLTEALSLIESMPMKPN 437
Query: 379 DVVVWRTLLGACSFHGNVEMGERVTRKI---LEMERGYGGDYVLMYNILAGVGRFGDAER 435
+ VW LL C H N E+ V + + + G ++L+ N+ A GR+ D
Sbjct: 438 N-AVWGALLSGCRLHKNDEIVSHVAKHLSFEIHPNNQAAGYFMLLANVYAADGRWQDTAT 496
Query: 436 LRRVMDERNAFKVPGCSLV 454
+RR M + K G S +
Sbjct: 497 VRRNMHDIGVKKPSGRSWI 515
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 81/338 (23%), Positives = 155/338 (45%), Gaps = 38/338 (11%)
Query: 75 FTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDE 134
F +S L ++C +S NL ++HA I GF Y+ L+++Y+S G L + K+F++
Sbjct: 29 FIFSVL-KSC--VSFRNLA-KIHAQIVVSGFSQKNYILNHLLSLYISFGSLGSAQKVFED 84
Query: 135 MPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALF 194
+ + WN +I G + + + LF+ M V + +G+T + L
Sbjct: 85 ITAPSTTVWNQIIKGHTRSKTSKKSIELFKRMTLAGVEA-----NGFTY------SFLLS 133
Query: 195 RKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGE---------KRGFTAFD--- 242
+ + + E +I ++ W N V++ LI+ Y KR FD
Sbjct: 134 ACVRSRLFREGEQIHGRVLVNGYWSNLYVRT-NLINLYANGGDGGDFDLKRARYLFDEMP 192
Query: 243 ---IRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENF 299
+ N L+ Y + G A K+F+++ +N+ +WT +++GFA +G K A+ F
Sbjct: 193 DSNVVGWNSLLAGYVRRGDFDGARKVFDEMP--ERNVRTWTIMVAGFAQNGQCKLALSLF 250
Query: 300 GRMQKVGLKPNRVTFLSVLNACSHGGLVEEG--LNFFDKMVEECEVLPD-IKHYGCLIDM 356
+M++ G++ ++V ++ L+AC+ G + G ++ + + LP + LI M
Sbjct: 251 DQMRRAGVELDQVALVAALSACAELGDLTLGKWIHGYVERTWRSRHLPVLVSLNNALIHM 310
Query: 357 LGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHG 394
G ++ A K IP + V W +++ + G
Sbjct: 311 YASCGVMDLAYKVFEEIPQR--NTVSWSSIITGFAKQG 346
>gi|242048970|ref|XP_002462229.1| hypothetical protein SORBIDRAFT_02g022150 [Sorghum bicolor]
gi|241925606|gb|EER98750.1| hypothetical protein SORBIDRAFT_02g022150 [Sorghum bicolor]
Length = 686
Score = 244 bits (623), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 134/347 (38%), Positives = 198/347 (57%), Gaps = 24/347 (6%)
Query: 109 VYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPC 168
V+ TA+V+ Y G L+++ ++FD MPE+N V+WN M+ V+ +E A+ LF+ MPC
Sbjct: 252 VFTWTAVVSGYAQNGMLEEAKRVFDAMPEKNAVSWNAMMAAYVQRRMMEEAKELFDAMPC 311
Query: 169 RNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNG-DVKSCQ 227
RNV SW ++ GY + +EA A+F M + ++ A+L A Q G ++ Q
Sbjct: 312 RNVASWNTMLTGYAQAGMLDEARAIFDMM-----PQKDAVSWAAMLAAYSQGGFSEETLQ 366
Query: 228 LIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFA 287
L G C + Y KCG + A FE++ E +++VSW ++I+G+A
Sbjct: 367 LFKEMG-------------RCAM--YFKCGNMEEAHSAFEEM--EERDIVSWNTMIAGYA 409
Query: 288 MHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDI 347
HG GKEA+E F M+K KP+ +T + VL ACSH GLVE+G+++F M + V
Sbjct: 410 RHGFGKEALEVFDTMRKTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHRDFGVTAKP 469
Query: 348 KHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKIL 407
+HY C+ID+LGRAGRL++A +P E D +W LLGA H N E+G KI
Sbjct: 470 EHYTCMIDLLGRAGRLDEAVNLMKDMPFE-PDSTMWGALLGASRIHRNSELGRNAAEKIF 528
Query: 408 EMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
E+E G YVL+ NI A G++ D +++R +M ER KVPG S +
Sbjct: 529 ELEPENAGMYVLLSNIYASSGKWRDVDKMRLMMHERGVKKVPGFSWI 575
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 112/438 (25%), Positives = 187/438 (42%), Gaps = 73/438 (16%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+NTLLH ++ S A L+ ++ P+ DS +Y+ +I SH N G
Sbjct: 100 YNTLLHALGVSSSLADARALFDEM------------PVKDSVSYNVMIS-----SHANHG 142
Query: 94 -TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVK 152
L + + ++ Y+ G ++++ LFD E + ++WN ++ G V+
Sbjct: 143 LVSLARHYFDLAPEKDAVSWNGMLAAYIRNGRIQEARDLFDSRTEWDAISWNALMAGYVQ 202
Query: 153 WGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILA 212
++E A+ +F MP R+VVSW ++ G+ R EA LF + T A
Sbjct: 203 CSQIEEAQKMFNRMPQRDVVSWNTMVSGHARRGDMAEARRLFDVAPIRDV-----FTWTA 257
Query: 213 VLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVE 272
V+ QNG ++ + + ++ ++ N ++ Y + + A +LF+ +
Sbjct: 258 VVSGYAQNGMLEEAKRVFDAMPEKNAVSW-----NAMMAAYVQRRMMEEAKELFDAMPC- 311
Query: 273 RKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLN 332
+N+ SW ++++G+A GM EA F M + + V++ ++L A S GG EE L
Sbjct: 312 -RNVASWNTMLTGYAQAGMLDEARAIFDMMP----QKDAVSWAAMLAAYSQGGFSEETLQ 366
Query: 333 FFDKM------------------VEECEVLPDIKHYGCLIDMLGRAGRLEQA-------E 367
F +M EE E DI + +I R G ++A
Sbjct: 367 LFKEMGRCAMYFKCGNMEEAHSAFEEMEER-DIVSWNTMIAGYARHGFGKEALEVFDTMR 425
Query: 368 KTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYG-----GDYVLMYN 422
KT+ P +IT V V L ACS G VE G M R +G Y M +
Sbjct: 426 KTSTK-PDDITLVGV----LAACSHSGLVEKG---ISYFYSMHRDFGVTAKPEHYTCMID 477
Query: 423 ILAGVGRFGDAERLRRVM 440
+L GR +A L + M
Sbjct: 478 LLGRAGRLDEAVNLMKDM 495
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 74/316 (23%), Positives = 135/316 (42%), Gaps = 54/316 (17%)
Query: 113 TALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPC---- 168
A++ Y + G L + F +P + ++N ++ L L AR+LF+EMP
Sbjct: 70 NAMLGGYAANGRLTLALSFFRSIPRPDSFSYNTLLHALGVSSSLADARALFDEMPVKDSV 129
Query: 169 ---------------------------RNVVSWTGIIDGYTRMNRSNEALALFRKMVACE 201
++ VSW G++ Y R R EA LF
Sbjct: 130 SYNVMISSHANHGLVSLARHYFDLAPEKDAVSWNGMLAAYIRNGRIQEARDLFDS----- 184
Query: 202 YTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFS 261
TE I+ A++ Q ++ Q + +R D+ N ++ +A+ G +
Sbjct: 185 RTEWDAISWNALMAGYVQCSQIEEAQKMFNRMPQR-----DVVSWNTMVSGHARRGDMAE 239
Query: 262 ASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNAC 321
A +LF+ + +++ +WT+++SG+A +GM +EA F M + N V++ +++ A
Sbjct: 240 ARRLFDVAPI--RDVFTWTAVVSGYAQNGMLEEAKRVFDAMP----EKNAVSWNAMMAAY 293
Query: 322 SHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVV 381
++EE FD M C ++ + ++ +AG L++A +P + D V
Sbjct: 294 VQRRMMEEAKELFDAM--PCR---NVASWNTMLTGYAQAGMLDEARAIFDMMPQK--DAV 346
Query: 382 VWRTLLGACSFHGNVE 397
W +L A S G E
Sbjct: 347 SWAAMLAAYSQGGFSE 362
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/268 (22%), Positives = 116/268 (43%), Gaps = 25/268 (9%)
Query: 136 PERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFR 195
P+ ++ N IT ++ G + A LF M R+ ++ ++ GY R AL+ FR
Sbjct: 31 PDAEVIRRNKAITAHMRAGRVPDAERLFAAMSRRSTSTYNAMLGGYAANGRLTLALSFFR 90
Query: 196 KMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAK 255
+ P + +L A+ + + + + + ++ N +I ++A
Sbjct: 91 SI-----PRPDSFSYNTLLHALGVSSSLADARALFDEMPVKDSVSY-----NVMISSHAN 140
Query: 256 CGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENF-GRMQKVGLKPNRVTF 314
G + A F D++ E K+ VSW +++ + +G +EA + F R + + N
Sbjct: 141 HGLVSLARHYF-DLAPE-KDAVSWNGMLAAYIRNGRIQEARDLFDSRTEWDAISWN--AL 196
Query: 315 LSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIP 374
++ CS +EE F++M + D+ + ++ G A R + AE L
Sbjct: 197 MAGYVQCSQ---IEEAQKMFNRMPQR-----DVVSWNTMVS--GHARRGDMAEARRLFDV 246
Query: 375 SEITDVVVWRTLLGACSFHGNVEMGERV 402
+ I DV W ++ + +G +E +RV
Sbjct: 247 APIRDVFTWTAVVSGYAQNGMLEEAKRV 274
>gi|357467379|ref|XP_003603974.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355493022|gb|AES74225.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 566
Score = 244 bits (623), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 145/437 (33%), Positives = 235/437 (53%), Gaps = 43/437 (9%)
Query: 21 LLTTNSLLHHSQLFNTLLHFYSLAESPQKAF-LLYKQLQQIYTHSHSPLPPLFDSFTYSF 79
LL TN L+ S +NT++ YS +P F L + + H++ P P D+FTYSF
Sbjct: 41 LLNTNPSLN-SYYYNTIIRAYSHTSNPTHHFQALSLFIFMLQPHTNVPKP---DTFTYSF 96
Query: 80 LIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERN 139
+++C L QLH I+K+GF +Y+ AL++MY +G
Sbjct: 97 ALKSCGRLKLTQQAKQLHGFINKMGFGFDLYIQNALIHMYSEIG---------------- 140
Query: 140 LVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVA 199
EL AR +F+ M R+VVSWT +I G+ + + EA+ LF++M+
Sbjct: 141 ---------------ELVIARQVFDRMSHRDVVSWTSMIAGFVNHHLTVEAIQLFQRMLE 185
Query: 200 CEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCI 259
+ +E T+++VL +G + + +HG +++G F V LI Y+KCGC+
Sbjct: 186 VG-VDVNEATVISVLRGCADSGALSVGRKVHGIVKEKGID-FKANVCTALIHMYSKCGCL 243
Query: 260 FSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLN 319
SA ++F+D V +++ WT++I G A HGM KEA+E F M+ +KP+ T + VL+
Sbjct: 244 ESAREVFDD--VLDRDVFVWTAMIYGLACHGMCKEAIELFLEMETCNVKPDERTIMVVLS 301
Query: 320 ACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITD 379
A + GLV EG FF+ + + + P+IKH+GC++D+L + G LE+AE +P + D
Sbjct: 302 AYRNAGLVREGYMFFNDVQKRYSMKPNIKHFGCMVDLLAKGGCLEEAEDFINAMPMK-PD 360
Query: 380 VVVWRTLLGACSFHGNVEMGERVTR--KILEMERGYGGDYVLMYNILAGVGRFGDAERLR 437
V+WRTL+ AC H + E ER+ + ++ M G Y+L N+ A G++ D +R
Sbjct: 361 AVIWRTLIWACKVHADTERAERLMKHLELQGMSAHDSGSYILASNVYASTGKWCDKAEVR 420
Query: 438 RVMDERNAFKVPGCSLV 454
+M+++ K PG S +
Sbjct: 421 ELMNKKGLVKPPGSSRI 437
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 80/264 (30%), Positives = 127/264 (48%), Gaps = 18/264 (6%)
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSN---EALALFRKMVA--CEYTEPSEI 208
G+L +AR L P N + II Y+ + +AL+LF M+ +P
Sbjct: 33 GDLNYARLLLNTNPSLNSYYYNTIIRAYSHTSNPTHHFQALSLFIFMLQPHTNVPKPDTF 92
Query: 209 TILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFED 268
T L + + + + +HG+ K GF FD+ + N LI Y++ G + A ++F+
Sbjct: 93 TYSFALKSCGRLKLTQQAKQLHGFINKMGF-GFDLYIQNALIHMYSEIGELVIARQVFDR 151
Query: 269 ISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVE 328
+S +++VSWTS+I+GF H + EA++ F RM +VG+ N T +SVL C+ G +
Sbjct: 152 MS--HRDVVSWTSMIAGFVNHHLTVEAIQLFQRMLEVGVDVNEATVISVLRGCADSGALS 209
Query: 329 EGLNFFDKMVEECEVLPDIKHYGC--LIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTL 386
G +V+E + D K C LI M + G LE A + + DV VW +
Sbjct: 210 VGRKVHG-IVKEKGI--DFKANVCTALIHMYSKCGCLESAREVFDDVLDR--DVFVWTAM 264
Query: 387 LGACSFHGNVEMGERVTRKILEME 410
+ + HG M + LEME
Sbjct: 265 IYGLACHG---MCKEAIELFLEME 285
>gi|242076924|ref|XP_002448398.1| hypothetical protein SORBIDRAFT_06g026540 [Sorghum bicolor]
gi|241939581|gb|EES12726.1| hypothetical protein SORBIDRAFT_06g026540 [Sorghum bicolor]
Length = 865
Score = 244 bits (623), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 128/381 (33%), Positives = 212/381 (55%), Gaps = 4/381 (1%)
Query: 72 FDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKL 131
D F + LI C + LG QLH++ K G V V+ +L++MY L+ + +
Sbjct: 369 LDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAESI 428
Query: 132 FDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEAL 191
F M E+++V+W MIT + G + AR F+ M +NV++W ++ Y + + L
Sbjct: 429 FRFMNEKDIVSWTSMITAHSQVGNIAKAREFFDGMSTKNVITWNAMLGAYIQHGAEEDGL 488
Query: 192 ALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLID 251
++ M++ + P +T + + G K I G K G D V N +I
Sbjct: 489 RMYNVMLSEKDVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLI-LDTSVANAVIT 547
Query: 252 TYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNR 311
Y+KCG I A K+F+ ++V K++VSW ++I+G++ HGMGK+A+E F + K G KP+
Sbjct: 548 MYSKCGRILEARKVFDFLNV--KDIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDY 605
Query: 312 VTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTAL 371
+++++VL+ CSH GLV+EG ++FD M + P ++H+ C++D+LGRAG L +A+
Sbjct: 606 ISYVAVLSGCSHSGLVQEGKSYFDMMKRVHNISPGLEHFSCMVDLLGRAGHLTEAKDLID 665
Query: 372 GIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFG 431
+P + T VW LL AC HGN E+ E + + E++ G Y+LM I A G+
Sbjct: 666 EMPMKPT-AEVWGALLSACKIHGNNELAELAAKHVFELDSPDSGSYMLMAKIYADAGKSD 724
Query: 432 DAERLRRVMDERNAFKVPGCS 452
D+ ++R++M ++ K PG S
Sbjct: 725 DSAQIRKLMRDKGIKKNPGYS 745
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 106/395 (26%), Positives = 179/395 (45%), Gaps = 49/395 (12%)
Query: 73 DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLF 132
++FT+++ +++C L +L QL ++ K G Q V ALV+M+V G + +S+LF
Sbjct: 137 NAFTFAYAMKSCGALGERSLALQLLGMVQKFGSQDDSDVAAALVDMFVRCGTVDLASRLF 196
Query: 133 DEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALA 192
+ E + N M+ G VK ++ A LF+ MP R+VVSW ++ ++ R EAL
Sbjct: 197 VRIKEPTIFCRNSMLVGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALD 256
Query: 193 LFRKMVAC-----EYTEPSEITILAVLPAI-WQNGDVKSCQLIHGYGEKRGFTAFDIRVL 246
+ M + T S +T A L ++ W G Q+I R D V
Sbjct: 257 MVVDMQSKGVRLDSTTYTSSLTACARLSSLRW--GKQLHAQVI------RNLPCIDPYVA 308
Query: 247 NCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVG 306
+ L++ YAKCGC A +F S+ +N V+WT +I+GF HG E+VE F +M+
Sbjct: 309 SALVELYAKCGCFKEAKGVFN--SLHDRNNVAWTVLIAGFLQHGCFTESVELFNQMRAEL 366
Query: 307 LKPNRVTFLSVLNACS-----------HGGLVEEGL-------NFFDKMVEECEVL---- 344
+ ++ ++++ C H ++ G N M +C+ L
Sbjct: 367 MTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAE 426
Query: 345 --------PDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNV 396
DI + +I + G + +A + G+ ++ +V+ W +LGA HG
Sbjct: 427 SIFRFMNEKDIVSWTSMITAHSQVGNIAKAREFFDGMSTK--NVITWNAMLGAYIQHGAE 484
Query: 397 EMGERVTRKILEMERGYGGDYVLMYNILAGVGRFG 431
E G R+ +L E+ D+V + G G
Sbjct: 485 EDGLRMYNVMLS-EKDVRPDWVTYVTLFKGCADLG 518
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 89/374 (23%), Positives = 165/374 (44%), Gaps = 46/374 (12%)
Query: 76 TYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLF-DE 134
++ +R+C LH + VG S V++ L++ Y+S G L D+ +L +
Sbjct: 6 AFADALRSCGARGALAGARALHGRLVAVGLASAVFLQNTLLHAYLSCGALPDARRLLLTD 65
Query: 135 MPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALF 194
+ N++T NVM+ G VK G L A LF MP R+V SW ++ GY + + +L F
Sbjct: 66 IAHPNVITHNVMLNGYVKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSQQYLASLESF 125
Query: 195 RKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYA 254
M + P+ T + + G+ + G +K G + D V L+D +
Sbjct: 126 VSMHRSGDSSPNAFTFAYAMKSCGALGERSLALQLLGMVQKFG-SQDDSDVAAALVDMFV 184
Query: 255 KCGCIFSASKLFEDI-----------------------------SVERKNLVSWTSIISG 285
+CG + AS+LF I S+ +++VSW ++S
Sbjct: 185 RCGTVDLASRLFVRIKEPTIFCRNSMLVGYVKTYGVDHALELFDSMPERDVVSWNMMVSA 244
Query: 286 FAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLP 345
+ G +EA++ MQ G++ + T+ S L AC+ + G +++ LP
Sbjct: 245 LSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRN---LP 301
Query: 346 DIKHY--GCLIDMLGRAGRLEQAEKTALGIPSEITDV--VVWRTLLGACSFHG----NVE 397
I Y L+++ + G ++A+ G+ + + D V W L+ HG +VE
Sbjct: 302 CIDPYVASALVELYAKCGCFKEAK----GVFNSLHDRNNVAWTVLIAGFLQHGCFTESVE 357
Query: 398 MGERVTRKILEMER 411
+ ++ +++ +++
Sbjct: 358 LFNQMRAELMTLDQ 371
>gi|356576967|ref|XP_003556601.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g35030, mitochondrial-like [Glycine max]
Length = 453
Score = 244 bits (623), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 126/330 (38%), Positives = 201/330 (60%), Gaps = 3/330 (0%)
Query: 125 LKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRM 184
L ++ +LF MPER++ +WN MITG ++ G+L +A LF EM +N ++WT ++ GY +
Sbjct: 93 LHEALELFQGMPERDMHSWNTMITGFIQNGKLNYAEKLFGEMREKNAITWTAMMMGYVQH 152
Query: 185 NRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIR 244
S EAL +F KM+A + +P+ T + VL A + Q IH K F D
Sbjct: 153 GLSEEALKVFNKMLANDGLKPNTGTFVTVLRACSDLAGLTEGQQIHQMISKTVFQ--DSX 210
Query: 245 VLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQK 304
+ LI+ Y KCG + +A +F+D + +++L+SW +I+G+A HG GKEA+ F MQ+
Sbjct: 211 ICGTLINMYPKCGELHTAKXMFDDGLLSQRDLISWNGMIAGYAHHGYGKEAINLFNEMQE 270
Query: 305 VGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLE 364
+G+ N VTF+ +L ACSH G+VEEGL +FD++++ + HY CL+D+ R GRL+
Sbjct: 271 LGVCANDVTFVGLLRACSHTGVVEEGLKYFDEILKNRSIXLREDHYACLVDLCDRTGRLK 330
Query: 365 QAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNIL 424
+A G+ E + + VW LL C+ HGNV++G+ V +KIL++E G + L+ N+
Sbjct: 331 EAFNIIEGLGKE-SPLTVWGVLLARCNVHGNVDIGKLVAKKILKIEPQNAGTHSLLSNMY 389
Query: 425 AGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
A VG++ +A +R M+++ K PG S +
Sbjct: 390 ASVGKWKEAANIRMKMNDKGLKKQPGYSWI 419
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 115/252 (45%), Gaps = 14/252 (5%)
Query: 64 SHSPLPPLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLG 123
++ L P ++ T+ ++R C+ L+ G Q+H +ISK FQ T L+NMY G
Sbjct: 167 ANDGLKP--NTGTFVTVLRACSDLAGLTEGQQIHQMISKTVFQDSXICGT-LINMYPKCG 223
Query: 124 FLKDSSKLFDE--MPERNLVTWNVMITGLVKWGELEFARSLFEEMP----CRNVVSWTGI 177
L + +FD+ + +R+L++WN MI G G + A +LF EM C N V++ G+
Sbjct: 224 ELHTAKXMFDDGLLSQRDLISWNGMIAGYAHHGYGKEAINLFNEMQELGVCANDVTFVGL 283
Query: 178 IDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSC-QLIHGYGEKR 236
+ + E L F +++ E ++ + G +K +I G G++
Sbjct: 284 LRACSHTGVVEEGLKYFDEILKNRSIXLREDHYACLVDLCDRTGRLKEAFNIIEGLGKES 343
Query: 237 GFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAV 296
T + + + C + G + + L +E +N + + + + +A G KEA
Sbjct: 344 PLTVWGVLLARCNVHGNVDIGKLVAKKIL----KIEPQNAGTHSLLSNMYASVGKWKEAA 399
Query: 297 ENFGRMQKVGLK 308
+M GLK
Sbjct: 400 NIRMKMNDKGLK 411
>gi|297724409|ref|NP_001174568.1| Os06g0114366 [Oryza sativa Japonica Group]
gi|218197444|gb|EEC79871.1| hypothetical protein OsI_21372 [Oryza sativa Indica Group]
gi|255676656|dbj|BAH93296.1| Os06g0114366 [Oryza sativa Japonica Group]
Length = 509
Score = 244 bits (623), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 133/317 (41%), Positives = 190/317 (59%), Gaps = 13/317 (4%)
Query: 139 NLVTWNVMITGLVKWGELEFARSLFEEMPCR-NVVSWTGIIDGYTRMNRSNEALALFRKM 197
++V WN ++ K G+ A F MP + NVVSW ++ + R EALALF++M
Sbjct: 187 DVVAWNALVDMYAKCGDAAAAHRWFRRMPVKKNVVSWNTMMSAFARAGELEEALALFQEM 246
Query: 198 VACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCG 257
A P + T +A L A Q G + + + +H Y + G +A D V N L+D YAKCG
Sbjct: 247 QAAA-VRPDDATFVAALGACAQLGALDTGRWLHAYMGRMGHSA-DGVVGNALLDMYAKCG 304
Query: 258 CIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSV 317
+ A+++F+ ++ R+++ ++TS+I G AMHG G++A+ F MQ+ G+ PN VT L V
Sbjct: 305 AVDQATEVFDGMA--RRDVYTYTSMILGLAMHGRGEDALSLFAGMQRAGVTPNEVTLLGV 362
Query: 318 LNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEI 377
L AC H GLVEEGL + M E P I+HYGC++DMLGRAGRL++AE+ +P
Sbjct: 363 LTACCHAGLVEEGLQQLNAMPE-----PRIEHYGCVVDMLGRAGRLDKAEELIAAMPVH- 416
Query: 378 TDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLR 437
+D ++W +LL AC HG+VE ERV R+ + GDYVLM N A GR G+A ++R
Sbjct: 417 SDALIWSSLLAACRAHGDVERAERVMRR--RVADADAGDYVLMSNTYASNGRHGEAVKVR 474
Query: 438 RVMDERNAFKVPGCSLV 454
M KVPGCSL+
Sbjct: 475 GQMRRNEIDKVPGCSLI 491
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 74/248 (29%), Positives = 121/248 (48%), Gaps = 12/248 (4%)
Query: 154 GELEFARSLFEEMPC-RNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILA 212
GEL AR+L + P R+VVS T ++ G+ R +EA+ LF M + A
Sbjct: 99 GELASARALVDGFPAGRDVVSCTAMVTGHARHGFLDEAVVLFFAMADDRCVAIDAVAAAA 158
Query: 213 VLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVE 272
A Q GD+ + H +R A D+ N L+D YAKCG +A + F + V
Sbjct: 159 AFSACAQIGDLALGREAHRRVAERK-VAMDVVAWNALVDMYAKCGDAAAAHRWFRRMPV- 216
Query: 273 RKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGL- 331
+KN+VSW +++S FA G +EA+ F MQ ++P+ TF++ L AC+ G ++ G
Sbjct: 217 KKNVVSWNTMMSAFARAGELEEALALFQEMQAAAVRPDDATFVAALGACAQLGALDTGRW 276
Query: 332 --NFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGA 389
+ +M + + L+DM + G ++QA + G+ DV + +++
Sbjct: 277 LHAYMGRMGHSADGVVG----NALLDMYAKCGAVDQATEVFDGMARR--DVYTYTSMILG 330
Query: 390 CSFHGNVE 397
+ HG E
Sbjct: 331 LAMHGRGE 338
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 110/258 (42%), Gaps = 48/258 (18%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+NT++ ++ A ++A L++++Q D T+ + CA L + G
Sbjct: 223 WNTMMSAFARAGELEEALALFQEMQAAAVRP--------DDATFVAALGACAQLGALDTG 274
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
LHA + ++G + V AL++MY G + ++++FD M R++ T+ MI GL
Sbjct: 275 RWLHAYMGRMGHSADGVVGNALLDMYAKCGAVDQATEVFDGMARRDVYTYTSMILGLAMH 334
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
G R +AL+LF M T P+E+T+L V
Sbjct: 335 G-------------------------------RGEDALSLFAGMQRAGVT-PNEVTLLGV 362
Query: 214 LPAIWQNGDV-KSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVE 272
L A G V + Q ++ E R I C++D + G + A +L + V
Sbjct: 363 LTACCHAGLVEEGLQQLNAMPEPR------IEHYGCVVDMLGRAGRLDKAEELIAAMPVH 416
Query: 273 RKNLVSWTSIISGFAMHG 290
L+ W+S+++ HG
Sbjct: 417 SDALI-WSSLLAACRAHG 433
>gi|357118977|ref|XP_003561223.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Brachypodium distachyon]
Length = 604
Score = 244 bits (623), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 150/474 (31%), Positives = 246/474 (51%), Gaps = 52/474 (10%)
Query: 14 TTQIHSHLLTTNSLLHHSQLFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFD 73
T +H+ + L +L N+LL Y + A L + P D
Sbjct: 106 ATALHALAVRAGHLPADLRLANSLLSIYLSLGAASSARRLIADI------------PRPD 153
Query: 74 SFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFD 133
+ T++ L+R C L + ++ + V N+ +++ Y ++G + + +LFD
Sbjct: 154 TVTWNTLLRACL---RSGLLPSARRLFDQMPHRDLVSYNS-MLSSYAAVGDMAGAGRLFD 209
Query: 134 EMPERNLVTWNVMITGLVKWG-ELEFARSLFEEMPCRNVVSWTGIIDGYT---------- 182
EMPER++VTWN M+ G + G ++ AR++F+ MP R+VVSW ++DGY
Sbjct: 210 EMPERDVVTWNTMLAGYARGGADMASARAVFDAMPERDVVSWNSMLDGYAQAGDVVMAWA 269
Query: 183 ---------------------RMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNG 221
R E L LF M+A + P+E T ++VL A G
Sbjct: 270 MFDGMPRRSAASWNVVLALYARRKDWRECLRLFDAMMAVGVSVPNEKTFVSVLTACGSLG 329
Query: 222 DVKSCQLIHGYGEKR-GFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWT 280
D++ + +HG +R D+ +L L+ YAKCG + +A ++F+ +S +++ SW
Sbjct: 330 DLERGKWVHGLVRERWDRLVPDVLLLTALLTMYAKCGAMETAREIFDSMS--ERSVPSWN 387
Query: 281 SIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEE 340
S+I G+ +HG ++A+E F M+K G +PN TF+ VL++C+HGGLV EG FD+MV
Sbjct: 388 SMIIGYGLHGQSEKALELFLEMEKSGPRPNETTFICVLSSCAHGGLVLEGWWCFDRMVRF 447
Query: 341 CEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGE 400
P +H+GC++D+LGRAG L+ +E + + + +W ++ A N ++GE
Sbjct: 448 YGFEPKAEHFGCMMDLLGRAGLLKDSENLIQNLQGKASP-ALWGIMMSASQTQNNYKLGE 506
Query: 401 RVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
V +K++EM+ G Y+L+ NI A GR+GD E++R VM E A K G SL+
Sbjct: 507 FVGKKLIEMKPAEFGPYLLLSNIYASEGRWGDVEKVREVMKENGAEKYVGLSLI 560
>gi|15225365|ref|NP_182015.1| Pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546766|sp|Q1PEU4.2|PP201_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g44880
gi|2344896|gb|AAC31836.1| hypothetical protein [Arabidopsis thaliana]
gi|330255385|gb|AEC10479.1| Pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 555
Score = 244 bits (623), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 152/487 (31%), Positives = 254/487 (52%), Gaps = 76/487 (15%)
Query: 31 SQLFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHP 90
S L N+++ Y +F LY+ L++ + P D+FT++ L ++C+
Sbjct: 42 SFLSNSMIKAYLETRQYPDSFALYRDLRK-----ETCFAP--DNFTFTTLTKSCSLSMCV 94
Query: 91 NLGTQLHAVISKVGFQSHVYVNT-------------------------------ALVNMY 119
G QLH+ I + GF + +YV+T AL++ Y
Sbjct: 95 YQGLQLHSQIWRFGFCADMYVSTGVVDMYAKFGKMGCARNAFDEMPHRSEVSWTALISGY 154
Query: 120 VSLGFLKDSSKLFDEMPE-RNLVTWNVMITGLVKWGELEFARSLFEEM------------ 166
+ G L +SKLFD+MP +++V +N M+ G VK G++ AR LF+EM
Sbjct: 155 IRCGELDLASKLFDQMPHVKDVVIYNAMMDGFVKSGDMTSARRLFDEMTHKTVITWTTMI 214
Query: 167 -------------------PCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSE 207
P RN+VSW +I GY + + E + LF++M A +P +
Sbjct: 215 HGYCNIKDIDAARKLFDAMPERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDD 274
Query: 208 ITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFE 267
+TIL+VLPAI G + + H + +++ ++V ++D Y+KCG I A ++F+
Sbjct: 275 VTILSVLPAISDTGALSLGEWCHCFVQRKKLDK-KVKVCTAILDMYSKCGEIEKAKRIFD 333
Query: 268 DISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLV 327
++ K + SW ++I G+A++G + A++ F M + KP+ +T L+V+ AC+HGGLV
Sbjct: 334 EMP--EKQVASWNAMIHGYALNGNARAALDLFVTMM-IEEKPDEITMLAVITACNHGGLV 390
Query: 328 EEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLL 387
EEG +F M E + I+HYGC++D+LGRAG L++AE +P E +++ + L
Sbjct: 391 EEGRKWFHVM-REMGLNAKIEHYGCMVDLLGRAGSLKEAEDLITNMPFEPNGIIL-SSFL 448
Query: 388 GACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFK 447
AC + ++E ER+ +K +E+E G+YVL+ N+ A R+ D ++ VM + A K
Sbjct: 449 SACGQYKDIERAERILKKAVELEPQNDGNYVLLRNLYAADKRWDDFGMVKNVMRKNQAKK 508
Query: 448 VPGCSLV 454
GCSL+
Sbjct: 509 EVGCSLI 515
>gi|15223099|ref|NP_172286.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174869|sp|Q9LN01.1|PPR21_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g08070
gi|8778839|gb|AAF79838.1|AC026875_18 T6D22.15 [Arabidopsis thaliana]
gi|332190118|gb|AEE28239.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 741
Score = 244 bits (623), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 144/424 (33%), Positives = 233/424 (54%), Gaps = 48/424 (11%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+N ++ Y+ + ++A L+K + + D T ++ CA LG
Sbjct: 234 WNAMISGYAETGNYKEALELFKDMMKTNVRP--------DESTMVTVVSACAQSGSIELG 285
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
Q+H I GF S++ + AL+++Y K
Sbjct: 286 RQVHLWIDDHGFGSNLKIVNALIDLYS-------------------------------KC 314
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
GELE A LFE +P ++V+SW +I GYT MN EAL LF++M+ T P+++T+L++
Sbjct: 315 GELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGET-PNDVTMLSI 373
Query: 214 LPAIWQNGDVKSCQLIHGYGEKR--GFT-AFDIRVLNCLIDTYAKCGCIFSASKLFEDIS 270
LPA G + + IH Y +KR G T A +R LID YAKCG I +A ++F S
Sbjct: 374 LPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRT--SLIDMYAKCGDIEAAHQVFN--S 429
Query: 271 VERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEG 330
+ K+L SW ++I GFAMHG + + F RM+K+G++P+ +TF+ +L+ACSH G+++ G
Sbjct: 430 ILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLG 489
Query: 331 LNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGAC 390
+ F M ++ ++ P ++HYGC+ID+LG +G L + + + + D V+W +LL AC
Sbjct: 490 RHIFRTMTQDYKMTPKLEHYGCMIDLLGHSG-LFKEAEEMINMMEMEPDGVIWCSLLKAC 548
Query: 391 SFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPG 450
HGNVE+GE ++++E G YVL+ NI A GR+ + + R +++++ KVPG
Sbjct: 549 KMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPG 608
Query: 451 CSLV 454
CS +
Sbjct: 609 CSSI 612
Score = 194 bits (494), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 116/368 (31%), Positives = 203/368 (55%), Gaps = 19/368 (5%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNL 92
++NT+ ++L+ P A LY + S LP +S+T+ F++++CA
Sbjct: 101 IWNTMFRGHALSSDPVSALKLY-----VCMISLGLLP---NSYTFPFVLKSCAKSKAFKE 152
Query: 93 GTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVK 152
G Q+H + K+G +YV+T+L++MYV G L+D+ K+FD+ P R++V++ +I G
Sbjct: 153 GQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYAS 212
Query: 153 WGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILA 212
G +E A+ LF+E+P ++VVSW +I GY EAL LF+ M+ P E T++
Sbjct: 213 RGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTN-VRPDESTMVT 271
Query: 213 VLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVE 272
V+ A Q+G ++ + +H + + GF + +++++N LID Y+KCG + +A LFE +
Sbjct: 272 VVSACAQSGSIELGRQVHLWIDDHGFGS-NLKIVNALIDLYSKCGELETACGLFERLPY- 329
Query: 273 RKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGL- 331
K+++SW ++I G+ + KEA+ F M + G PN VT LS+L AC+H G ++ G
Sbjct: 330 -KDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRW 388
Query: 332 --NFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGA 389
+ DK ++ ++ LIDM + G +E A + I + + W ++
Sbjct: 389 IHVYIDKRLKGVTNASSLR--TSLIDMYAKCGDIEAAHQVFNSILHK--SLSSWNAMIFG 444
Query: 390 CSFHGNVE 397
+ HG +
Sbjct: 445 FAMHGRAD 452
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 126/279 (45%), Gaps = 44/279 (15%)
Query: 156 LEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLP 215
L +A S+F+ + N++ W + G+ + AL L+ M++ P+ T VL
Sbjct: 84 LPYAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLL-PNSYTFPFVLK 142
Query: 216 AIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKN 275
+ ++ K Q IHG+ K G D+ V LI Y + G + A K+F+ ++
Sbjct: 143 SCAKSKAFKEGQQIHGHVLKLG-CDLDLYVHTSLISMYVQNGRLEDAHKVFD--KSPHRD 199
Query: 276 LVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFD 335
+VS+T++I G+A G + A + F ++ +K + V++ ++++ + G +E L F
Sbjct: 200 VVSYTALIKGYASRGYIENAQKLF---DEIPVK-DVVSWNAMISGYAETGNYKEALELFK 255
Query: 336 KMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGN 395
M++ V PD E T + T++ AC+ G+
Sbjct: 256 DMMKT-NVRPD--------------------ESTMV-------------TVVSACAQSGS 281
Query: 396 VEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAE 434
+E+G +V I + G+G + ++ ++ + G+ E
Sbjct: 282 IELGRQVHLWI--DDHGFGSNLKIVNALIDLYSKCGELE 318
>gi|296090147|emb|CBI39966.3| unnamed protein product [Vitis vinifera]
Length = 726
Score = 244 bits (623), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 134/419 (31%), Positives = 231/419 (55%), Gaps = 7/419 (1%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+N+L+ Y+ +A +Y Q +++ + P D T + +++ C L G
Sbjct: 184 WNSLISGYNANGYWNEALEIYYQSIKLFMEMVNQFKP--DLLTITSILQACGHLGDLEFG 241
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
+H + G++ + L+NMY G L S ++F M ++ V+WN MI ++
Sbjct: 242 KYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQN 301
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
G++ + +FE M R++++W II N L + +M E P T+L++
Sbjct: 302 GKMGDSLKVFENMKARDIITWNTIIASCVHSEDCNLGLRMISRMRT-EGVTPDMATMLSI 360
Query: 214 LPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVER 273
LP + + IHG K G + D+ V N LI+ Y+KCG + ++ ++F+ ++
Sbjct: 361 LPVCSLLAAKRQGKEIHGCIFKLGLES-DVPVGNVLIEMYSKCGSLRNSFQVFK--LMKT 417
Query: 274 KNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNF 333
K++V+WT++IS M+G GK+AV FG M+ G+ P+ V F++++ ACSH GLVEEGLN+
Sbjct: 418 KDVVTWTALISACGMYGEGKKAVRAFGEMEAAGIVPDHVAFVAIIFACSHSGLVEEGLNY 477
Query: 334 FDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFH 393
F +M ++ ++ P I+HY C++D+L R+ L++AE L +P + D +W LL AC
Sbjct: 478 FHRMKKDYKIEPRIEHYACVVDLLSRSALLDKAEDFILSMPLK-PDSSIWGALLSACRMS 536
Query: 394 GNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCS 452
G+ E+ ERV+ +I+E+ G YVL+ NI A +G++ +R+ + R K PGCS
Sbjct: 537 GDTEIAERVSERIIELNPDDTGYYVLVSNIYAALGKWDQVRSIRKSIKARGLKKDPGCS 595
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 124/491 (25%), Positives = 204/491 (41%), Gaps = 117/491 (23%)
Query: 14 TTQIHS-HLLTTNSLLHHSQLFNTLL-----HF---------YSLAESPQKAFLLYKQLQ 58
TTQ+H H L LHHS +F+ L HF + LA SP L+ +
Sbjct: 29 TTQLHKLHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFRLA-SPSNNVYLWNSII 87
Query: 59 QIYTHS--HSPLPPLF----------DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQ 106
+ TH+ S L+ D++T+ +I CA L + +H + +GF
Sbjct: 88 RALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAKSIHDRVLDMGFG 147
Query: 107 SHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEM 166
S +Y+ AL++MY L + K+F+EMP R++V+WN +I+G G
Sbjct: 148 SDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANG------------ 195
Query: 167 PCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSC 226
W ++ Y +++ LF +MV +P +TI ++L A GD++
Sbjct: 196 ------YWNEALEIYY------QSIKLFMEMV--NQFKPDLLTITSILQACGHLGDLEFG 241
Query: 227 QLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGF 286
+ +H Y G+ D N LI+ YAKCG + ++ ++F + K+ VSW S+I+ +
Sbjct: 242 KYVHDYMITSGYEC-DTTASNILINMYAKCGNLLASQEVFSGMKC--KDSVSWNSMINVY 298
Query: 287 AMHGMGKEAVENF-------------------------------GRMQKVGLKPNRVTFL 315
+G ++++ F RM+ G+ P+ T L
Sbjct: 299 IQNGKMGDSLKVFENMKARDIITWNTIIASCVHSEDCNLGLRMISRMRTEGVTPDMATML 358
Query: 316 SVLNACS-----------HGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLE 364
S+L CS HG + + GL D+ LI+M + G L
Sbjct: 359 SILPVCSLLAAKRQGKEIHGCIFKLGLE------------SDVPVGNVLIEMYSKCGSLR 406
Query: 365 QAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEME-RGYGGDYVLMYNI 423
+ + + ++ DVV W L+ AC +G G++ R EME G D+V I
Sbjct: 407 NSFQVFKLMKTK--DVVTWTALISACGMYGE---GKKAVRAFGEMEAAGIVPDHVAFVAI 461
Query: 424 LAGVGRFGDAE 434
+ G E
Sbjct: 462 IFACSHSGLVE 472
>gi|115479089|ref|NP_001063138.1| Os09g0407800 [Oryza sativa Japonica Group]
gi|51091508|dbj|BAD36246.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|51091564|dbj|BAD36301.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113631371|dbj|BAF25052.1| Os09g0407800 [Oryza sativa Japonica Group]
gi|215740507|dbj|BAG97163.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 612
Score = 244 bits (623), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 129/343 (37%), Positives = 214/343 (62%), Gaps = 4/343 (1%)
Query: 113 TALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVV 172
++++ Y G ++++ K+FD MPER++V+WN M+ G + G++E AR +F+ MP R++V
Sbjct: 223 NSMISGYSRHGDMENARKMFDAMPERDVVSWNSMLDGYAQAGDVEMARLVFDGMPKRSIV 282
Query: 173 SWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGY 232
SW I+ Y ++ E L LF M+A T P+E T ++VL A GD++ + +H
Sbjct: 283 SWNVILALYAKLRDWRECLGLFDVMIAEGNTVPNEKTFVSVLTACANLGDLEKGRWVHDL 342
Query: 233 GEKR-GFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGM 291
++R D+ +L L+ YAKCG + +A ++F S+ K++ SW S+I G+ +HG
Sbjct: 343 VQERWDRLVPDVLLLTTLLTMYAKCGVMETAREIFN--SMGEKSVPSWNSMIIGYGLHGQ 400
Query: 292 GKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYG 351
++A+E F M++ G +PN TF+ VL++C+HGGLV EG FD+MV + P +H+G
Sbjct: 401 SEKALELFLEMERDGPRPNETTFICVLSSCAHGGLVLEGWWCFDRMVRFYSIEPKSEHFG 460
Query: 352 CLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMER 411
C++D+LGRAG LEQ+E + ++++ +W L+ A N+++GE V +K++EM
Sbjct: 461 CMMDLLGRAGLLEQSENLIENLQGKVSE-ALWGILMSASQTQNNIKLGEFVGKKLIEMRP 519
Query: 412 GYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
G Y+L+ NI A GR+ D E++R+VM+E+ K G SLV
Sbjct: 520 TEVGPYILLSNIYAAEGRWDDVEKVRKVMEEKGVEKDAGLSLV 562
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 82/197 (41%), Gaps = 17/197 (8%)
Query: 208 ITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFE 267
+T+L ++ + + + + +H G D+R+ N L+ Y G SA +L
Sbjct: 91 LTLLLLVSSKHHSHSLPAASALHALAVSSGHLPSDLRIANSLLSLYLSLGSPASARRLLA 150
Query: 268 DISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNR--VTFLSVLNACSHGG 325
DI R + V+W +++ G+ A F M P R V++ S++ G
Sbjct: 151 DIP--RPDAVTWNTLLRACLRLGLLPAARRLFDEM------PERDVVSYNSMVAGYVAEG 202
Query: 326 LVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRT 385
+ N FD M D+ + +I R G +E A K +P DVV W +
Sbjct: 203 DLAGARNLFDGMARR-----DVVTWNSMISGYSRHGDMENARKMFDAMPER--DVVSWNS 255
Query: 386 LLGACSFHGNVEMGERV 402
+L + G+VEM V
Sbjct: 256 MLDGYAQAGDVEMARLV 272
>gi|125605648|gb|EAZ44684.1| hypothetical protein OsJ_29310 [Oryza sativa Japonica Group]
Length = 612
Score = 244 bits (623), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 129/343 (37%), Positives = 214/343 (62%), Gaps = 4/343 (1%)
Query: 113 TALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVV 172
++++ Y G ++++ K+FD MPER++V+WN M+ G + G++E AR +F+ MP R++V
Sbjct: 223 NSMISGYSRHGDMENARKMFDAMPERDVVSWNSMLDGYAQAGDVEMARLVFDGMPKRSIV 282
Query: 173 SWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGY 232
SW I+ Y ++ E L LF M+A T P+E T ++VL A GD++ + +H
Sbjct: 283 SWNVILALYAKLRDWRECLGLFDVMIAEGNTVPNEKTFVSVLTACANLGDLEKGRWVHDL 342
Query: 233 GEKR-GFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGM 291
++R D+ +L L+ YAKCG + +A ++F S+ K++ SW S+I G+ +HG
Sbjct: 343 VQERWDRLVPDVLLLTTLLTMYAKCGVMETAREIFN--SMGEKSVPSWNSMIIGYGLHGQ 400
Query: 292 GKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYG 351
++A+E F M++ G +PN TF+ VL++C+HGGLV EG FD+MV + P +H+G
Sbjct: 401 SEKALELFLEMERDGPRPNETTFICVLSSCAHGGLVLEGWWCFDRMVRFYSIEPKSEHFG 460
Query: 352 CLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMER 411
C++D+LGRAG LEQ+E + ++++ +W L+ A N+++GE V +K++EM
Sbjct: 461 CMMDLLGRAGLLEQSENLIENLQGKVSE-ALWGILMSASQTQNNIKLGEFVGKKLIEMRP 519
Query: 412 GYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
G Y+L+ NI A GR+ D E++R+VM+E+ K G SLV
Sbjct: 520 TEVGPYILLSNIYAAEGRWDDVEKVRKVMEEKGVEKDAGLSLV 562
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 82/197 (41%), Gaps = 17/197 (8%)
Query: 208 ITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFE 267
+T+L ++ + + + + +H G D+R+ N L+ Y G SA +L
Sbjct: 91 LTLLLLVSSKHHSHSLPAASALHALAVSSGHLPSDLRIANSLLSLYLSLGSPASARRLLA 150
Query: 268 DISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNR--VTFLSVLNACSHGG 325
DI R + V+W +++ G+ A F M P R V++ S++ G
Sbjct: 151 DIP--RPDAVTWNTLLRACLRLGLLPAARRLFDEM------PERDVVSYNSMVAGYVAEG 202
Query: 326 LVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRT 385
+ N FD M D+ + +I R G +E A K +P DVV W +
Sbjct: 203 DLAGARNLFDGMARR-----DVVTWNSMISGYSRHGDMENARKMFDAMPER--DVVSWNS 255
Query: 386 LLGACSFHGNVEMGERV 402
+L + G+VEM V
Sbjct: 256 MLDGYAQAGDVEMARLV 272
>gi|297728297|ref|NP_001176512.1| Os11g0433100 [Oryza sativa Japonica Group]
gi|62701919|gb|AAX92992.1| hypothetical protein LOC_Os11g24530 [Oryza sativa Japonica Group]
gi|77550326|gb|ABA93123.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|125534237|gb|EAY80785.1| hypothetical protein OsI_35965 [Oryza sativa Indica Group]
gi|125577016|gb|EAZ18238.1| hypothetical protein OsJ_33779 [Oryza sativa Japonica Group]
gi|255680048|dbj|BAH95240.1| Os11g0433100 [Oryza sativa Japonica Group]
Length = 622
Score = 244 bits (622), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 132/342 (38%), Positives = 205/342 (59%), Gaps = 4/342 (1%)
Query: 113 TALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVV 172
A+++ Y ++++ LF +MP R++ +WN+MITG ++ +L+ AR LF+EMP RNV+
Sbjct: 232 NAMISGYARNHRIEEALDLFTKMPIRDVASWNIMITGFIQNKDLKSARQLFDEMPKRNVI 291
Query: 173 SWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGY 232
+WT +++GY + +S AL LF M+ + +P+++T L L A + Q +H
Sbjct: 292 TWTTMMNGYLQCMQSEMALKLFNCMLV-QGIQPNQVTFLGSLDACSNLAALCEGQQVHQM 350
Query: 233 GEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMG 292
K + FD V + L++ YAKCG I A +F D S+E K+L+SW II+ +A HG G
Sbjct: 351 ICKTP-SQFDTFVESTLMNLYAKCGEIRLARNVF-DFSME-KDLISWNGIIAAYAHHGFG 407
Query: 293 KEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGC 352
EA+ + MQ+ G KPN T++ +L+ACSH GLV+EGL F+ MV++ ++ +HY C
Sbjct: 408 IEAMHLYKNMQENGYKPNDATYVGLLSACSHAGLVDEGLKIFESMVKDNSIVVRDEHYTC 467
Query: 353 LIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERG 412
L+D+ RAGRLE A++ + T VW LLG C+ HGN +G+ + +LE E
Sbjct: 468 LVDLCSRAGRLEDAKRLISWFKIKPTSSTVWSALLGGCNSHGNESIGDLAAKHLLEAEPD 527
Query: 413 YGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
G Y L+ NI A G++ +A +R M+ R K PGCS +
Sbjct: 528 NAGTYTLLCNIYASAGKWKEAAEIRSEMNVRGLKKQPGCSWI 569
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 96/363 (26%), Positives = 173/363 (47%), Gaps = 60/363 (16%)
Query: 115 LVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSW 174
++ Y ++G ++D+S LF+ MP R+ +WN+++ GLV+ G LE AR +FE MP R+V+SW
Sbjct: 141 MLEAYTAVGRVEDASALFNRMPVRDAGSWNILLCGLVRSGSLERARKMFERMPVRDVMSW 200
Query: 175 TGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGE 234
T +I G R ++A LF M E + ++ A++ +N ++ +
Sbjct: 201 TTMISGLARNGSVDDAWVLFDAM-----PERNVVSWNAMISGYARNHRIEEALDL----- 250
Query: 235 KRGFTAFDIRVL---NCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGM 291
FT IR + N +I + + + SA +LF+++ ++N+++WT++++G+
Sbjct: 251 ---FTKMPIRDVASWNIMITGFIQNKDLKSARQLFDEMP--KRNVITWTTMMNGYLQCMQ 305
Query: 292 GKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNF----------FDKMVE-- 339
+ A++ F M G++PN+VTFL L+ACS+ + EG FD VE
Sbjct: 306 SEMALKLFNCMLVQGIQPNQVTFLGSLDACSNLAALCEGQQVHQMICKTPSQFDTFVEST 365
Query: 340 ---------ECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGI---------------PS 375
E + ++ + D++ G + GI P+
Sbjct: 366 LMNLYAKCGEIRLARNVFDFSMEKDLISWNGIIAAYAHHGFGIEAMHLYKNMQENGYKPN 425
Query: 376 EITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGD--YVLMYNILAGVGRFGDA 433
+ T V LL ACS G V+ G ++ +++ D Y + ++ + GR DA
Sbjct: 426 DATYV----GLLSACSHAGLVDEGLKIFESMVKDNSIVVRDEHYTCLVDLCSRAGRLEDA 481
Query: 434 ERL 436
+RL
Sbjct: 482 KRL 484
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 139/282 (49%), Gaps = 24/282 (8%)
Query: 107 SHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEM 166
+HV + V + G + D+ +LFD MP+R++V+W M+ + G L+ AR LF+
Sbjct: 39 NHVQDSNWRVAELAAAGRVSDARRLFDGMPDRDVVSWTAMVAAYARRGMLQEARVLFDRP 98
Query: 167 PC-RNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKS 225
RNVV+WT ++ GY R R +EA ALF M E S T+L A+ G V+
Sbjct: 99 DARRNVVTWTALLSGYARARRVDEAEALFEGMA--ERNVVSWNTMLEAYTAV---GRVED 153
Query: 226 CQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISG 285
+ R +++I L+ + G + A K+FE + V ++++SWT++ISG
Sbjct: 154 ASALFNRMPVRDAGSWNI-----LLCGLVRSGSLERARKMFERMPV--RDVMSWTTMISG 206
Query: 286 FAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLP 345
A +G +A F M + N V++ ++++ + +EE L+ F KM +
Sbjct: 207 LARNGSVDDAWVLFDAMP----ERNVVSWNAMISGYARNHRIEEALDLFTKM-----PIR 257
Query: 346 DIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLL 387
D+ + +I + L+ A + +P +V+ W T++
Sbjct: 258 DVASWNIMITGFIQNKDLKSARQLFDEMPKR--NVITWTTMM 297
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 81/161 (50%), Gaps = 12/161 (7%)
Query: 237 GFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAV 296
G D+ ++ YA+ G + A LF D R+N+V+WT+++SG+A EA
Sbjct: 66 GMPDRDVVSWTAMVAAYARRGMLQEARVLF-DRPDARRNVVTWTALLSGYARARRVDEAE 124
Query: 297 ENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDM 356
F M + N V++ ++L A + G VE+ F++M + D + L+
Sbjct: 125 ALFEGMAE----RNVVSWNTMLEAYTAVGRVEDASALFNRMP-----VRDAGSWNILLCG 175
Query: 357 LGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVE 397
L R+G LE+A K +P + DV+ W T++ + +G+V+
Sbjct: 176 LVRSGSLERARKMFERMP--VRDVMSWTTMISGLARNGSVD 214
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/266 (20%), Positives = 104/266 (39%), Gaps = 35/266 (13%)
Query: 73 DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLF 132
+ T+ + C+ L+ G Q+H +I K Q +V + L+N+Y G ++ + +F
Sbjct: 324 NQVTFLGSLDACSNLAALCEGQQVHQMICKTPSQFDTFVESTLMNLYAKCGEIRLARNVF 383
Query: 133 DEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALA 192
D E++L++WN GII Y EA+
Sbjct: 384 DFSMEKDLISWN-------------------------------GIIAAYAHHGFGIEAMH 412
Query: 193 LFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDT 252
L++ M Y +P++ T + +L A G V I K CL+D
Sbjct: 413 LYKNMQENGY-KPNDATYVGLLSACSHAGLVDEGLKIFESMVKDNSIVVRDEHYTCLVDL 471
Query: 253 YAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRV 312
++ G + A +L ++ + W++++ G H G E++ + + +P+
Sbjct: 472 CSRAGRLEDAKRLISWFKIKPTSSTVWSALLGGCNSH--GNESIGDLAAKHLLEAEPDNA 529
Query: 313 -TFLSVLNACSHGGLVEEGLNFFDKM 337
T+ + N + G +E +M
Sbjct: 530 GTYTLLCNIYASAGKWKEAAEIRSEM 555
>gi|297846398|ref|XP_002891080.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336922|gb|EFH67339.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 562
Score = 244 bits (622), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 147/423 (34%), Positives = 230/423 (54%), Gaps = 42/423 (9%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+N ++ ++ + P AF Y+ + Q S S D+ T SF ++ CA +
Sbjct: 71 WNAIIRGFAGSSHPSLAFSWYRSMLQ---RSSSSALCRVDALTCSFTLKACARALCSSAM 127
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
Q+H IS+ GF + + T L++ Y K
Sbjct: 128 VQIHCQISRRGFSADALLCTTLLDAYS-------------------------------KN 156
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
G+L A LF+EM R+V SW +I G NR++EAL L+++M E SE+T++A
Sbjct: 157 GDLISALKLFDEMSVRDVASWNALIAGLVAGNRASEALELYKRM-EMEGIRRSEVTVVAA 215
Query: 214 LPAIWQNGDVKSCQ-LIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVE 272
L A GDVK + ++HGY + ++ V N +ID Y+KCG + A ++FE +
Sbjct: 216 LGACSHLGDVKEGEKILHGYIKDEKLD-HNVIVSNAVIDMYSKCGFVDKAFQVFEQFT-G 273
Query: 273 RKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLN 332
+K++V+W ++I+GF++HG A+E F +++ G+KP+ V++L+ L AC H GLVE G++
Sbjct: 274 KKSVVTWNTMITGFSVHGEAHRALEIFEKLEHNGIKPDDVSYLAALTACRHTGLVEYGIS 333
Query: 333 FFDKMVEECE-VLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACS 391
F+ M C V P++KHYGC++D+L RAGRL +A + S + D V+W++LLGA
Sbjct: 334 IFNNMA--CNGVEPNMKHYGCVVDLLSRAGRLREAHDIICSM-SMVPDPVLWQSLLGASE 390
Query: 392 FHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGC 451
H NVEM E +RKI EM GD+VL+ N+ A GR+ D +R M+ + KVPG
Sbjct: 391 IHNNVEMAEIASRKIKEMGVNNDGDFVLLSNVYAAQGRWKDVGLVRDDMESKQVKKVPGI 450
Query: 452 SLV 454
S +
Sbjct: 451 SYI 453
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 130/263 (49%), Gaps = 18/263 (6%)
Query: 153 WGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILA 212
+G+L FA +F +P W II G+ + + A + +R M+ + S + L
Sbjct: 50 FGDLSFAVKIFRHIPKPLTNDWNAIIRGFAGSSHPSLAFSWYRSML-----QRSSSSALC 104
Query: 213 VLPAIWQNGDVKSCQ---------LIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSAS 263
+ A+ + +K+C IH +RGF+A D + L+D Y+K G + SA
Sbjct: 105 RVDALTCSFTLKACARALCSSAMVQIHCQISRRGFSA-DALLCTTLLDAYSKNGDLISAL 163
Query: 264 KLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSH 323
KLF+++SV +++ SW ++I+G EA+E + RM+ G++ + VT ++ L ACSH
Sbjct: 164 KLFDEMSV--RDVASWNALIAGLVAGNRASEALELYKRMEMEGIRRSEVTVVAALGACSH 221
Query: 324 GGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVW 383
G V+EG +++ ++ ++ +IDM + G +++A + + VV W
Sbjct: 222 LGDVKEGEKILHGYIKDEKLDHNVIVSNAVIDMYSKCGFVDKAFQVFEQFTGK-KSVVTW 280
Query: 384 RTLLGACSFHGNVEMGERVTRKI 406
T++ S HG + K+
Sbjct: 281 NTMITGFSVHGEAHRALEIFEKL 303
>gi|359495599|ref|XP_003635033.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59200, chloroplastic-like [Vitis vinifera]
Length = 650
Score = 244 bits (622), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 140/405 (34%), Positives = 233/405 (57%), Gaps = 15/405 (3%)
Query: 54 YKQLQQIYTHS-HSPLPPLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVN 112
Y + Q+Y+ H + P D++ + +++ C + G ++H+ K+GF S+ V
Sbjct: 128 YLEAIQLYSRMLHESILP--DNYLMASILKACGSQLALREGREVHSRALKLGFSSNRLVR 185
Query: 113 TALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVV 172
++ +Y G L D+ ++F+EMPE ++V VMI+ G +E A ++F + ++ V
Sbjct: 186 LRIMELYGKCGELGDARRVFEEMPE-DVVASTVMISSYSDQGLVEEAGAVFSRVRRKDTV 244
Query: 173 SWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGY 232
WT +IDG+ R +N AL FR M E P+E TI+ VL A Q G ++ + +H Y
Sbjct: 245 CWTAMIDGFVRNEETNRALEAFRGMQG-ENVRPNEFTIVCVLSACSQLGALEIGRWVHSY 303
Query: 233 GEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMG 292
K ++ V N LI+ Y++CG I A +F+++ + ++++++ ++ISG +M+G
Sbjct: 304 MRKFEIE-LNLFVGNALINMYSRCGSIDEAQTVFDEM--KDRDVITYNTMISGLSMNGKS 360
Query: 293 KEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGC 352
++A+E F M L+P VTF+ VLNACSHGGLV+ G F M + V P I+HYGC
Sbjct: 361 RQAIELFRVMVGRRLRPTNVTFVGVLNACSHGGLVDFGFEIFHSMARDYRVEPQIEHYGC 420
Query: 353 LIDMLGRAGRLEQAE---KTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEM 409
++D+LGR GRLE+A +T P D ++ TLL AC H N+E+GE+V +++ +
Sbjct: 421 MVDLLGRVGRLEEAYDLIRTMKMTP----DHIMLGTLLSACKMHKNLELGEQVAKELEDR 476
Query: 410 ERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
+ G YVL+ ++ A G++ +A ++R M E K PGCS +
Sbjct: 477 GQADSGTYVLLSHVYASSGKWKEAAQVRAKMKEAGMQKEPGCSSI 521
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 123/272 (45%), Gaps = 33/272 (12%)
Query: 152 KWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITIL 211
K +++A +F+ NV +T +IDG+ EA+ L+ +M+ E P +
Sbjct: 93 KCHAIDYASRIFQYTHNPNVYLYTALIDGFVSSGNYLEAIQLYSRMLH-ESILPDNYLMA 151
Query: 212 AVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDIS- 270
++L A ++ + +H K GF++ + L +++ Y KCG + A ++FE++
Sbjct: 152 SILKACGSQLALREGREVHSRALKLGFSSNRLVRLR-IMELYGKCGELGDARRVFEEMPE 210
Query: 271 ---------------------------VERKNLVSWTSIISGFAMHGMGKEAVENFGRMQ 303
V RK+ V WT++I GF + A+E F MQ
Sbjct: 211 DVVASTVMISSYSDQGLVEEAGAVFSRVRRKDTVCWTAMIDGFVRNEETNRALEAFRGMQ 270
Query: 304 KVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRL 363
++PN T + VL+ACS G +E G + + + E+ ++ LI+M R G +
Sbjct: 271 GENVRPNEFTIVCVLSACSQLGALEIG-RWVHSYMRKFEIELNLFVGNALINMYSRCGSI 329
Query: 364 EQAEKTALGIPSEITDVVVWRTLLGACSFHGN 395
++A+ + DV+ + T++ S +G
Sbjct: 330 DEAQTVFDEMKDR--DVITYNTMISGLSMNGK 359
Score = 46.2 bits (108), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 80/186 (43%), Gaps = 22/186 (11%)
Query: 227 QLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGF 286
QLI + F F+ L+ + +KC I AS++F+ N+ +T++I GF
Sbjct: 71 QLIRNGHSQDPFMVFE------LLRSCSKCHAIDYASRIFQ--YTHNPNVYLYTALIDGF 122
Query: 287 AMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVE---ECEV 343
G EA++ + RM + P+ S+L AC + EG + ++
Sbjct: 123 VSSGNYLEAIQLYSRMLHESILPDNYLMASILKACGSQLALREGREVHSRALKLGFSSNR 182
Query: 344 LPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMG---- 399
L ++ ++++ G+ G L A + +P DVV ++ + S G VE
Sbjct: 183 LVRLR----IMELYGKCGELGDARRVFEEMPE---DVVASTVMISSYSDQGLVEEAGAVF 235
Query: 400 ERVTRK 405
RV RK
Sbjct: 236 SRVRRK 241
>gi|145333540|ref|NP_001078415.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332658995|gb|AEE84395.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 462
Score = 244 bits (622), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 133/369 (36%), Positives = 217/369 (58%), Gaps = 37/369 (10%)
Query: 87 LSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVM 146
++ LG +H+V+ + GF S +YV +L+++Y + G + + K+FD+MPE++LV WN +
Sbjct: 1 MADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSV 60
Query: 147 ITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPS 206
I G + G+ E A +L+ EM + + +P
Sbjct: 61 INGFAENGKPEEALALYTEMNSKGI--------------------------------KPD 88
Query: 207 EITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLF 266
TI+++L A + G + + +H Y K G T ++ N L+D YA+CG + A LF
Sbjct: 89 GFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTR-NLHSSNVLLDLYARCGRVEEAKTLF 147
Query: 267 EDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKV-GLKPNRVTFLSVLNACSHGG 325
+++ KN VSWTS+I G A++G GKEA+E F M+ GL P +TF+ +L ACSH G
Sbjct: 148 DEMV--DKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCG 205
Query: 326 LVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRT 385
+V+EG +F +M EE ++ P I+H+GC++D+L RAG++++A + +P + +VV+WRT
Sbjct: 206 MVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQ-PNVVIWRT 264
Query: 386 LLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNA 445
LLGAC+ HG+ ++ E +IL++E + GDYVL+ N+ A R+ D +++R+ M
Sbjct: 265 LLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGV 324
Query: 446 FKVPGCSLV 454
KVPG SLV
Sbjct: 325 KKVPGHSLV 333
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 129/279 (46%), Gaps = 46/279 (16%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+N++++ ++ P++A LY ++ + P D FT L+ CA + LG
Sbjct: 57 WNSVINGFAENGKPEEALALYTEMNS------KGIKP--DGFTIVSLLSACAKIGALTLG 108
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
++H + KVG +++ + L+++Y G ++++ LFDEM ++N V+W +I GL
Sbjct: 109 KRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLA-- 166
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
++G+ + EA+ LF+ M + E P EIT + +
Sbjct: 167 ------------------------VNGFGK-----EAIELFKYMESTEGLLPCEITFVGI 197
Query: 214 LPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRV--LNCLIDTYAKCGCIFSASKLFEDISV 271
L A G VK + + R + R+ C++D A+ G + A + + + +
Sbjct: 198 LYACSHCGMVK--EGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPM 255
Query: 272 ERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPN 310
+ N+V W +++ +HG A F R+Q + L+PN
Sbjct: 256 Q-PNVVIWRTLLGACTVHGDSDLA--EFARIQILQLEPN 291
>gi|357142899|ref|XP_003572730.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g18840-like [Brachypodium distachyon]
Length = 497
Score = 244 bits (622), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 136/419 (32%), Positives = 221/419 (52%), Gaps = 39/419 (9%)
Query: 69 PPLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLG----- 123
PP D + SF + +C L + + LH+ ++G VY+ A V+ Y +
Sbjct: 73 PP--DHLSISFSLHSCTRLPCHPIASLLHSFAVRLGHAGDVYIVNAAVSAYFTAADVASA 130
Query: 124 --FLKDSSK--------------------------LFDEMPERNLVTWNVMITGLVKWGE 155
D+SK FD MPERN+V+WN M+ G
Sbjct: 131 ERLFSDTSKDVADVVTWTTMVAGHARAGDVERARWFFDAMPERNVVSWNAMLGAYASAGM 190
Query: 156 LEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLP 215
L AR LF+ M RN +W+ ++ G + + EAL +F MVA P+E +++V+
Sbjct: 191 LSEARKLFDGMHSRNAATWSSMVTGLVQSDHCEEALRVFSDMVA-RGVVPNESILVSVIS 249
Query: 216 AIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKN 275
A Q ++ +H Y ++ + + + ++D Y KCGCI +A ++F + V +N
Sbjct: 250 ACAQLRSLEHGVWVHAYVKRELHGSMSVILATAIVDMYGKCGCIHNAIRVFAAMPV--RN 307
Query: 276 LVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFD 335
+ SW S+I+G AM+G +A+ F +MQ G++PN +TF+ +L ACSH GLV+EG F+
Sbjct: 308 IYSWNSMITGLAMNGREMQALSLFWKMQMAGVQPNDITFIGLLGACSHSGLVDEGRWLFN 367
Query: 336 KMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGN 395
+MV + + P +HYG ++D+LGRAG +++A +P E +W L GAC+ HG
Sbjct: 368 RMVNDFGIQPVPEHYGLMVDLLGRAGLVKEAVDFVKNMPVE-PHPGLWGALAGACNIHGE 426
Query: 396 VEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
VE+GE + +K++E+E +G Y+L+ NI R+ D +RR++ ER K G ++V
Sbjct: 427 VELGEEIAKKLIELEPRHGSRYILLSNIYGTSSRWEDMATVRRLIKERKVSKGTGNAVV 485
>gi|148906747|gb|ABR16520.1| unknown [Picea sitchensis]
Length = 644
Score = 244 bits (622), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 136/356 (38%), Positives = 212/356 (59%), Gaps = 6/356 (1%)
Query: 99 VISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEF 158
+ K+ Q+ V NT ++ YV G +K++ KLF MPERN+++WN +I+G + G++E
Sbjct: 282 LFEKMPEQNLVSWNT-MIAGYVQNGSVKEAFKLFQIMPERNVISWNAVISGFAQNGQVEE 340
Query: 159 ARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIW 218
A LF+ MP NVVSW +I GY++ ++ AL LF +M + +P+ T VLPA
Sbjct: 341 ALKLFKTMPECNVVSWNAMIAGYSQNGQAENALKLFGQMQMVD-MKPNTETFAIVLPACA 399
Query: 219 QNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVS 278
++ H + GF + D+ V N L+ YAKCG I A K+F+ + +++ S
Sbjct: 400 ALAVLEQGNEAHEVVIRSGFQS-DVLVGNTLVGMYAKCGSIEDARKVFD--RMRQQDSAS 456
Query: 279 WTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMV 338
+++I G+A++G KE++E F +MQ GLKP+RVTF+ VL+AC H GLV+EG +FD M
Sbjct: 457 LSAMIVGYAINGCSKESLELFEQMQFTGLKPDRVTFVGVLSACCHAGLVDEGRQYFDIMT 516
Query: 339 EECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEM 398
+ P ++HYGC+ID+LGRAG ++A +P + D +W +LL AC H N+++
Sbjct: 517 RFYHITPAMEHYGCMIDLLGRAGCFDEANDLINKMPIK-PDADMWGSLLSACRTHNNIDL 575
Query: 399 GERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
GE+V + ++ + YVL+ NI A GR+ D +R M +R K GCS +
Sbjct: 576 GEKVAQHLIALNPQNPAPYVLLSNIYAAAGRWDDIGSVRNRMKDRKVKKKLGCSWI 631
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 102/336 (30%), Positives = 179/336 (53%), Gaps = 24/336 (7%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+ ++ Y+ E Q+A + ++Q + + FT++ ++ C L LG
Sbjct: 134 WTAMIAAYARHEHGQEALGFFYEMQDVGIQP--------NHFTFASILPACTDLEV--LG 183
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
+ H I K GF+S+V+V LV+MY G ++ + +LFD+MP+R++V+WN MI G V+
Sbjct: 184 -EFHDEIVKGGFESNVFVGNGLVDMYAKRGCIEFARELFDKMPQRDVVSWNAMIAGYVQN 242
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
G +E A LF+E+P R+V++W ++ GY + A+ LF KM E + ++ +
Sbjct: 243 GLIEDALKLFQEIPKRDVITWNTMMAGYAQCGDVENAVELFEKM-----PEQNLVSWNTM 297
Query: 214 LPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVER 273
+ QNG VK + +R ++ N +I +A+ G + A KLF+ ++
Sbjct: 298 IAGYVQNGSVKEAFKLFQIMPERNVISW-----NAVISGFAQNGQVEEALKLFK--TMPE 350
Query: 274 KNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNF 333
N+VSW ++I+G++ +G + A++ FG+MQ V +KPN TF VL AC+ ++E+G N
Sbjct: 351 CNVVSWNAMIAGYSQNGQAENALKLFGQMQMVDMKPNTETFAIVLPACAALAVLEQG-NE 409
Query: 334 FDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKT 369
++V D+ L+ M + G +E A K
Sbjct: 410 AHEVVIRSGFQSDVLVGNTLVGMYAKCGSIEDARKV 445
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 153/292 (52%), Gaps = 26/292 (8%)
Query: 144 NVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYT 203
N +++ VK G L AR +F+EMP +NVVSWT +I Y R EAL F +M
Sbjct: 104 NKLVSIYVKLGSLVEARRVFDEMPVKNVVSWTAMIAAYARHEHGQEALGFFYEMQDVG-I 162
Query: 204 EPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSAS 263
+P+ T ++LPA D++ H K GF + ++ V N L+D YAK GCI A
Sbjct: 163 QPNHFTFASILPAC---TDLEVLGEFHDEIVKGGFES-NVFVGNGLVDMYAKRGCIEFAR 218
Query: 264 KLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSH 323
+LF+ + ++++VSW ++I+G+ +G+ ++A++ F + K + +T+ +++ +
Sbjct: 219 ELFDKMP--QRDVVSWNAMIAGYVQNGLIEDALKLFQEIPKRDV----ITWNTMMAGYAQ 272
Query: 324 GGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVW 383
G VE + F+KM E+ ++ + +I + G +++A K +P +V+ W
Sbjct: 273 CGDVENAVELFEKMPEQ-----NLVSWNTMIAGYVQNGSVKEAFKLFQIMPER--NVISW 325
Query: 384 RTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYN-ILAGVGRFGDAE 434
++ + +G VE ++ + + E V+ +N ++AG + G AE
Sbjct: 326 NAVISGFAQNGQVEEALKLFKTMPECN-------VVSWNAMIAGYSQNGQAE 370
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 135/304 (44%), Gaps = 51/304 (16%)
Query: 176 GIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEK 235
G++ + R EAL + + MV P T ++L + +L+H + +
Sbjct: 34 GLVKSLCKQGRLREALHILQDMVE-NGIWPHSSTYDSLLQGCLNAKSLPDAKLLHAHMIQ 92
Query: 236 RGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEA 295
F DI + N L+ Y K G + A ++F+++ V KN+VSWT++I+ +A H G+EA
Sbjct: 93 TQFECQDISLGNKLVSIYVKLGSLVEARRVFDEMPV--KNVVSWTAMIAAYARHEHGQEA 150
Query: 296 VENFGRMQKVGLKPNRVTFLSVLNACS--------HGGLVEEGL---------------- 331
+ F MQ VG++PN TF S+L AC+ H +V+ G
Sbjct: 151 LGFFYEMQDVGIQPNHFTFASILPACTDLEVLGEFHDEIVKGGFESNVFVGNGLVDMYAK 210
Query: 332 --------NFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVW 383
FDKM + D+ + +I + G +E A K IP DV+ W
Sbjct: 211 RGCIEFARELFDKMPQR-----DVVSWNAMIAGYVQNGLIEDALKLFQEIPKR--DVITW 263
Query: 384 RTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGV---GRFGDAERLRRVM 440
T++ + G+VE + K+ E + V ++AG G +A +L ++M
Sbjct: 264 NTMMAGYAQCGDVENAVELFEKMPEQ------NLVSWNTMIAGYVQNGSVKEAFKLFQIM 317
Query: 441 DERN 444
ERN
Sbjct: 318 PERN 321
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 106/256 (41%), Gaps = 41/256 (16%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+N ++ YS + A L+ Q+Q + + P ++ T++ ++ CA L+ G
Sbjct: 356 WNAMIAGYSQNGQAENALKLFGQMQMV------DMKP--NTETFAIVLPACAALAVLEQG 407
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
+ H V+ + GFQS V V LV MY G ++D+ K+FD M +++ + + MI G
Sbjct: 408 NEAHEVVIRSGFQSDVLVGNTLVGMYAKCGSIEDARKVFDRMRQQDSASLSAMIVGYAIN 467
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
G + + LFE+M +TG+ +P +T + V
Sbjct: 468 GCSKESLELFEQM------QFTGL--------------------------KPDRVTFVGV 495
Query: 214 LPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVER 273
L A G V + + + C+ID + GC A+ L + + +
Sbjct: 496 LSACCHAGLVDEGRQYFDIMTRFYHITPAMEHYGCMIDLLGRAGCFDEANDLINKMPI-K 554
Query: 274 KNLVSWTSIISGFAMH 289
+ W S++S H
Sbjct: 555 PDADMWGSLLSACRTH 570
>gi|226530803|ref|NP_001148047.1| LOC100281656 [Zea mays]
gi|195615502|gb|ACG29581.1| selenium-binding protein-like [Zea mays]
Length = 597
Score = 244 bits (622), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 145/447 (32%), Positives = 234/447 (52%), Gaps = 14/447 (3%)
Query: 10 PNNITTQIHSHLLTTNSLLHHSQLFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLP 69
P Q+H+HLL T L+ T F SLA + L T H LP
Sbjct: 34 PPRRFIQLHAHLLRTGLLIFSP--VTTTSAFLSLAAVSLPSHRALAVLDHHLTTPHY-LP 90
Query: 70 PLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKD-S 128
+F + ++R LS P+ + + +G + + + L+ SL +
Sbjct: 91 ---STFQCNSILRA---LSDPSDALRFLCRVRALGRRGNAFTLAILLKPRCSLAHARQLH 144
Query: 129 SKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSN 188
+ + E R+ + ++ G+ + AR LF+EMP R+ V+W +I Y R R+
Sbjct: 145 ANVVAEGHLRDALLATSLMRCYANRGDGDGARKLFDEMPVRDAVAWNVLITCYARNRRTK 204
Query: 189 EALALFRKMVACEY-TEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLN 247
+AL LF +M + +EP ++T + +L A G + + + Y E+ G+ +++V N
Sbjct: 205 DALKLFEEMRGKDSESEPDDVTCILLLQACSSLGALDFGEQVWAYAEEHGYGG-ELKVRN 263
Query: 248 CLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGL 307
LI Y +CGC+ A ++F +K++V+WT++ISG A +G G +A+ F M + +
Sbjct: 264 SLITMYLRCGCVDKAYRVFS--GTPQKSVVTWTAMISGLAANGFGNDAISVFEEMIRSDV 321
Query: 308 KPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAE 367
P+ TF VL+ACSH GLV+EG FFD M E + P+++HYGC++D++GRAG L++A
Sbjct: 322 APDEQTFTGVLSACSHSGLVDEGFRFFDMMRCEYGLKPNVRHYGCIVDLMGRAGLLDEAY 381
Query: 368 KTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGV 427
+ D +WRTLLGAC HG+V++GERV ++E++ GDYVL+ N A V
Sbjct: 382 EFVTNEMKVAPDATIWRTLLGACRIHGHVDLGERVIGNLIELKAQQAGDYVLLLNTYAAV 441
Query: 428 GRFGDAERLRRVMDERNAFKVPGCSLV 454
G + +R++M E PGC+ V
Sbjct: 442 GEWSKVSEIRKLMQEEGIQTTPGCTTV 468
>gi|414870414|tpg|DAA48971.1| TPA: selenium-binding protein-like protein [Zea mays]
Length = 611
Score = 243 bits (621), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 144/447 (32%), Positives = 233/447 (52%), Gaps = 14/447 (3%)
Query: 10 PNNITTQIHSHLLTTNSLLHHSQLFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLP 69
P Q+H+HLL T L+ T F SLA + L T H
Sbjct: 48 PPRRFIQLHAHLLRTGLLIFSP--VTTTSAFLSLAAVSLPSHRALAVLDHHLTTPHY--- 102
Query: 70 PLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKD-S 128
L +F + ++R LS P+ + + +G + + + L+ SL +
Sbjct: 103 -LPSTFQCNSILRA---LSDPSDALRFLCRVRALGRRGNAFTLAILLKPRCSLAHARQLH 158
Query: 129 SKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSN 188
+ + E R+ + ++ G+ + AR LF+EMP R+ V+W +I Y R R+
Sbjct: 159 ANVVAEGHLRDALLATSLMRCYANRGDGDGARKLFDEMPVRDAVAWNVLITCYARNRRTK 218
Query: 189 EALALFRKMVACEY-TEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLN 247
+AL LF +M + +EP ++T + +L A G + + + Y E+ G+ +++V N
Sbjct: 219 DALKLFEEMRGKDSESEPDDVTCILLLQACSSLGALDFGEQVWAYAEEHGYGG-ELKVRN 277
Query: 248 CLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGL 307
LI Y +CGC+ A ++F +K++V+WT++ISG A +G G +A+ F M + +
Sbjct: 278 SLITMYLRCGCVDKAYRVFS--GTPQKSVVTWTAMISGLAANGFGNDAISVFEEMIRSDV 335
Query: 308 KPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAE 367
P+ TF VL+ACSH GLV+EG FFD M E + P+++HYGC++D++GRAG L++A
Sbjct: 336 APDEQTFTGVLSACSHSGLVDEGFRFFDMMRCEYGLKPNVRHYGCIVDLMGRAGLLDEAY 395
Query: 368 KTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGV 427
+ D +WRTLLGAC HG+V++GERV ++E++ GDYVL+ N A V
Sbjct: 396 EFVTNEMKVAPDATIWRTLLGACRIHGHVDLGERVIGNLIELKAQQAGDYVLLLNTYAAV 455
Query: 428 GRFGDAERLRRVMDERNAFKVPGCSLV 454
G + +R++M E PGC+ V
Sbjct: 456 GEWSKVSEIRKLMQEEGIQTTPGCTTV 482
>gi|347954546|gb|AEP33773.1| organelle transcript processing 82, partial [Lobularia maritima]
Length = 695
Score = 243 bits (621), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 141/422 (33%), Positives = 238/422 (56%), Gaps = 44/422 (10%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+N ++ Y+ + ++A L+K++ + + + P D T ++ CA + LG
Sbjct: 188 WNAMISGYAETGNNKEALELFKEMMK------TNVRP--DESTMVSVVSACAQSASIELG 239
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
Q+H+ I GF S++ + AL+++Y+ K
Sbjct: 240 RQVHSWIDDHGFGSNLKIVNALIDLYI-------------------------------KC 268
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
GE+E A LFE + ++V+SW +I GYT MN EAL LF++M+ + P+++T+L++
Sbjct: 269 GEVETACGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGES-PNDVTMLSI 327
Query: 214 LPAIWQNGDVKSCQLIHGYGEKR-GFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVE 272
LPA G ++ + IH Y KR A LID YAKCG I +A ++F+ S+
Sbjct: 328 LPACAHLGAIEIGRWIHVYINKRLKGVANASSHRTSLIDMYAKCGDIEAAQQVFD--SIL 385
Query: 273 RKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLN 332
++L SW ++I GFAMHG A + F RM+K ++P+ +TF+ +L+ACSH G+++ G +
Sbjct: 386 NRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNEIEPDDITFVGLLSACSHSGMLDLGRH 445
Query: 333 FFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSF 392
F M E+ ++ P ++HYGC+ID+LG +G ++AE+ + E D V+W +LL AC
Sbjct: 446 IFRSMKEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINTMEME-PDGVIWCSLLKACKM 504
Query: 393 HGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCS 452
HGNVE+GE + ++++E G YVL+ NI A GR+ + ++R +++++ KVPGCS
Sbjct: 505 HGNVELGESYAQNLIKIEPKNPGSYVLLSNIYATAGRWNEVAKIRALLNDKGMKKVPGCS 564
Query: 453 LV 454
+
Sbjct: 565 SI 566
Score = 201 bits (512), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 138/460 (30%), Positives = 235/460 (51%), Gaps = 53/460 (11%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNL 92
++NT+ ++L+ P A LY + S LP + +T+ FL+++CA
Sbjct: 55 IWNTMFRGHALSSDPVSALYLY-----VCMISLGLLP---NCYTFPFLLKSCAKSKAFRE 106
Query: 93 GTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVK 152
G Q+H + K+G+ +YV+T+L++MYV G L+D+ K+FD+ R++V++ +ITG
Sbjct: 107 GQQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYAS 166
Query: 153 WGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILA 212
G + A+ +F+E+P ++VVSW +I GY + EAL LF++M+ P E T+++
Sbjct: 167 KGYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTN-VRPDESTMVS 225
Query: 213 VLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVE 272
V+ A Q+ ++ + +H + + GF + +++++N LID Y KCG + +A LFE +S
Sbjct: 226 VVSACAQSASIELGRQVHSWIDDHGFGS-NLKIVNALIDLYIKCGEVETACGLFEGLSY- 283
Query: 273 RKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGL- 331
K+++SW ++I G+ + KEA+ F M + G PN VT LS+L AC+H G +E G
Sbjct: 284 -KDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRW 342
Query: 332 --NFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEK--------------------- 368
+ +K ++ V H LIDM + G +E A++
Sbjct: 343 IHVYINKRLK--GVANASSHRTSLIDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFA 400
Query: 369 ------TALGIPSEI------TDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGG- 415
A I S + D + + LL ACS G +++G + R + E +
Sbjct: 401 MHGRANAAFDIFSRMRKNEIEPDDITFVGLLSACSHSGMLDLGRHIFRSMKEDYKITPKL 460
Query: 416 -DYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
Y M ++L G F +AE + M E V CSL+
Sbjct: 461 EHYGCMIDLLGHSGLFKEAEEMINTM-EMEPDGVIWCSLL 499
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 67/145 (46%), Gaps = 5/145 (3%)
Query: 262 ASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNAC 321
A +FE +++ NL+ W ++ G A+ A+ + M +GL PN TF +L +C
Sbjct: 41 AISVFE--TIQEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSC 98
Query: 322 SHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVV 381
+ EG +++ L D+ + LI M + GRLE A K + S DVV
Sbjct: 99 AKSKAFREGQQIHGHVLKLGYDL-DLYVHTSLISMYVQNGRLEDARK--VFDQSSHRDVV 155
Query: 382 VWRTLLGACSFHGNVEMGERVTRKI 406
+ L+ + G + +++ +I
Sbjct: 156 SYTALITGYASKGYIASAQKMFDEI 180
>gi|222628408|gb|EEE60540.1| hypothetical protein OsJ_13880 [Oryza sativa Japonica Group]
Length = 594
Score = 243 bits (621), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 141/401 (35%), Positives = 225/401 (56%), Gaps = 13/401 (3%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+ +L Y A + ++A LL+ +++ S + P D + ++ TCA + G
Sbjct: 138 WGVMLDCYCQARNYEEALLLFHSMKR------SRVVP--DQVIIATVLSTCAHTRNLRFG 189
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
+H+ + V+ AL+NMY S ++ + KL++ + E+ +V M+ G K
Sbjct: 190 KAIHSYMLVSDTLIDAQVSCALMNMYASCADMEMAEKLYNRVSEKEIVLSTTMVYGYAKN 249
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
G++E A S+F MP ++VVSW+ +I GY ++ EAL LF M +P EIT+L+V
Sbjct: 250 GKVEIAHSIFNGMPAKDVVSWSAMIAGYAESSKPMEALNLFHDMQR-SGVKPDEITMLSV 308
Query: 214 LPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVER 273
+ A G ++ + IH + E + + N LID ++KCG + A +F ++ +
Sbjct: 309 ISACANVGALEKARCIHSFVENHSMCKI-LPIGNALIDMFSKCGSLTLALDVFN--AMPQ 365
Query: 274 KNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNF 333
KN+V+WTSII+ AMHG G+ A+ F M+ G++PN VTFL +L AC H GLVEEG
Sbjct: 366 KNVVTWTSIITASAMHGDGRSALTLFENMKSEGIQPNGVTFLGLLYACCHAGLVEEGRLL 425
Query: 334 FDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFH 393
F MV++ + P +HYGC++D+LGRA L QA + +VV+W +LL AC H
Sbjct: 426 FKIMVQQYRIEPMHEHYGCMVDLLGRAKLLGQAADLIQSMHLR-PNVVIWGSLLAACRMH 484
Query: 394 GNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAE 434
G++E+G +KILE++ +GG VL+ NI A G + D +
Sbjct: 485 GDLELGTFAAKKILELDPNHGGAQVLLSNIYAEYGNWNDVK 525
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 91/347 (26%), Positives = 151/347 (43%), Gaps = 69/347 (19%)
Query: 80 LIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERN 139
L+R A H + +VG + +V TALV Y + G ++D+ ++FD MP+R+
Sbjct: 75 LLRAIAFARSLGTAGAAHGLAFRVGAEVDGFVGTALVRAYAACGRVEDARRVFDGMPDRD 134
Query: 140 LVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVA 199
LV W VM +D Y + EAL LF M
Sbjct: 135 LVAWGVM-------------------------------LDCYCQARNYEEALLLFHSMKR 163
Query: 200 CEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCI 259
P ++ I VL +++ + IH Y T D +V L++ YA C +
Sbjct: 164 SRVV-PDQVIIATVLSTCAHTRNLRFGKAIHSYMLVSD-TLIDAQVSCALMNMYASCADM 221
Query: 260 FSASKLFEDIS-----------------------------VERKNLVSWTSIISGFAMHG 290
A KL+ +S + K++VSW+++I+G+A
Sbjct: 222 EMAEKLYNRVSEKEIVLSTTMVYGYAKNGKVEIAHSIFNGMPAKDVVSWSAMIAGYAESS 281
Query: 291 MGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEG--LNFFDKMVEECEVLPDIK 348
EA+ F MQ+ G+KP+ +T LSV++AC++ G +E+ ++ F + C++LP
Sbjct: 282 KPMEALNLFHDMQRSGVKPDEITMLSVISACANVGALEKARCIHSFVENHSMCKILPI-- 339
Query: 349 HYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGN 395
LIDM + G L A +P + +VV W +++ A + HG+
Sbjct: 340 -GNALIDMFSKCGSLTLALDVFNAMPQK--NVVTWTSIITASAMHGD 383
>gi|449494077|ref|XP_004159440.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g34160-like [Cucumis sativus]
Length = 576
Score = 243 bits (621), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 136/421 (32%), Positives = 230/421 (54%), Gaps = 42/421 (9%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+N ++ +L+ P A Y+ + + S D+ T SF ++ CA +
Sbjct: 69 WNAVIRGTALSSDPANAVFWYRAM------AASNGLHRIDALTCSFALKACARALARSEA 122
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
QLH+ + + GF + V + T L++ Y +G L + KLFDEMP+ ++ +WN +I
Sbjct: 123 IQLHSQLLRFGFNADVLLQTTLLDAYAKIGDLDLAQKLFDEMPQPDIASWNALIA----- 177
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
G+ + +R +A+ F++M P+ +T+
Sbjct: 178 --------------------------GFAQGSRPADAIMTFKRMKVDGNLRPNAVTVQGA 211
Query: 214 LPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVER 273
L A Q G +K + +H Y + + +++V N +ID YAKCG + A +FE++ +
Sbjct: 212 LLACSQLGALKEGESVHKYIVEEKLDS-NVQVCNVVIDMYAKCGSMDKAYWVFENMRCD- 269
Query: 274 KNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNF 333
K+L++W ++I FAMHG G +A++ F ++ + G+ P+ V++L+VL AC+H GLVE+GL
Sbjct: 270 KSLITWNTMIMAFAMHGDGHKALDLFEKLGRSGMSPDAVSYLAVLCACNHAGLVEDGLKL 329
Query: 334 FDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFH 393
F+ M + + P+IKHYG ++D+LGRAGRL++A +P ++V+W+TLLGAC +
Sbjct: 330 FNSMTQR-GLEPNIKHYGSMVDLLGRAGRLKEAYDIVSSLP--FPNMVLWQTLLGACRTY 386
Query: 394 GNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSL 453
G+VEM E +RK++EM G +VL+ N+ A R+ D R+R M R+ K PG S
Sbjct: 387 GDVEMAELASRKLVEMGFISCGXFVLLSNVYAARQRWDDVGRVRDAMRRRDVKKTPGFSY 446
Query: 454 V 454
+
Sbjct: 447 I 447
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 122/251 (48%), Gaps = 7/251 (2%)
Query: 147 ITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACE-YTEP 205
+ + +G+L +A +F +P + W +I G + A+ +R M A
Sbjct: 42 LCAISSFGDLSYALHIFRYIPYPSTNDWNAVIRGTALSSDPANAVFWYRAMAASNGLHRI 101
Query: 206 SEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKL 265
+T L A + +H + GF A D+ + L+D YAK G + A KL
Sbjct: 102 DALTCSFALKACARALARSEAIQLHSQLLRFGFNA-DVLLQTTLLDAYAKIGDLDLAQKL 160
Query: 266 FEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVG-LKPNRVTFLSVLNACSHG 324
F+++ + ++ SW ++I+GFA +A+ F RM+ G L+PN VT L ACS
Sbjct: 161 FDEMP--QPDIASWNALIAGFAQGSRPADAIMTFKRMKVDGNLRPNAVTVQGALLACSQL 218
Query: 325 GLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWR 384
G ++EG + +VEE ++ +++ +IDM + G +++A + + + ++ W
Sbjct: 219 GALKEGESVHKYIVEE-KLDSNVQVCNVVIDMYAKCGSMDKAYWVFENMRCDKS-LITWN 276
Query: 385 TLLGACSFHGN 395
T++ A + HG+
Sbjct: 277 TMIMAFAMHGD 287
>gi|242075862|ref|XP_002447867.1| hypothetical protein SORBIDRAFT_06g017170 [Sorghum bicolor]
gi|241939050|gb|EES12195.1| hypothetical protein SORBIDRAFT_06g017170 [Sorghum bicolor]
Length = 688
Score = 243 bits (621), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 145/427 (33%), Positives = 231/427 (54%), Gaps = 18/427 (4%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+N+L+ Y +A +L+ ++ SP D T S ++ CA L+ G
Sbjct: 220 WNSLITCYEQNGPVGEALMLFVEMMAA---GFSP-----DEVTLSSVMSACAGLAADREG 271
Query: 94 TQLHAVISKVG-FQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVK 152
Q+HA + K + + +N ALV+MY G ++ +FD MP R++V+ ++TG K
Sbjct: 272 RQVHAHMVKCDRLRDDMVLNNALVDMYAKCGRTWEARCIFDSMPSRSIVSETSILTGYAK 331
Query: 153 WGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILA 212
+E A+ +F +M +NV++W +I Y + EA+ LF ++ + P+ T
Sbjct: 332 SANVEDAQVVFSQMVEKNVIAWNVLIAAYAQNGEEEEAIRLFVQLKR-DSIWPTHYTYGN 390
Query: 213 VLPAIWQNGDVKSCQLIHGYGEKRGF-----TAFDIRVLNCLIDTYAKCGCIFSASKLFE 267
VL A D++ Q H + K GF D+ V N L+D Y K G I +K+FE
Sbjct: 391 VLNACGNIADLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSIDDGAKVFE 450
Query: 268 DISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLV 327
++ ++ VSW ++I G+A +G K+A+ F RM P+ VT + VL+AC H GLV
Sbjct: 451 RMAA--RDNVSWNAMIVGYAQNGRAKDALHLFERMLCSNENPDSVTMIGVLSACGHSGLV 508
Query: 328 EEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLL 387
+EG +F M E+ + P HY C++D+LGRAG L++AE+ +P E D V+W +LL
Sbjct: 509 DEGRRYFHSMTEDHGITPSRDHYTCMVDLLGRAGHLKEAEELINDMPME-PDSVLWASLL 567
Query: 388 GACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFK 447
GAC H NVE+GE ++ E++ G YVL+ N+ A +G++ + R+RR M +R K
Sbjct: 568 GACRLHKNVELGEWTAGRLFELDPQNSGPYVLLSNMYAEMGKWAEVFRVRRSMKDRGVSK 627
Query: 448 VPGCSLV 454
PGCS +
Sbjct: 628 QPGCSWI 634
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 98/358 (27%), Positives = 172/358 (48%), Gaps = 20/358 (5%)
Query: 88 SHPNL--GTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNV 145
S PNL HA I K ++ LV+ Y LG L+D+ ++FDE+P RN ++N
Sbjct: 29 SAPNLSGARAAHARILKSPVAGETFLLNTLVSTYARLGRLRDARRVFDEIPLRNTFSYNA 88
Query: 146 MITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEP 205
+++ + G + AR+LFE +P + S+ ++ R R + A AL + +A + +
Sbjct: 89 LLSAYARLGRPDEARALFEAIPDPDQCSYNAVVAALARHGRGHAADAL--RFLAAMHADD 146
Query: 206 ---SEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSA 262
+ + + L A D ++ + +HG R A D+ + + L+D YAKC A
Sbjct: 147 FVLNAYSFASALSACAAEKDSRTGEQVHGL-VARSPHADDVHIRSALVDMYAKCERPEDA 205
Query: 263 SKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACS 322
++F+ ++ +N+VSW S+I+ + +G EA+ F M G P+ VT SV++AC+
Sbjct: 206 RRVFD--AMPERNVVSWNSLITCYEQNGPVGEALMLFVEMMAAGFSPDEVTLSSVMSACA 263
Query: 323 HGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVV 382
EG MV+ + D+ L+DM + GR +A +PS +V
Sbjct: 264 GLAADREGRQVHAHMVKCDRLRDDMVLNNALVDMYAKCGRTWEARCIFDSMPSR--SIVS 321
Query: 383 WRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNIL-AGVGRFGDAERLRRV 439
++L + NVE + V +++E V+ +N+L A + G+ E R+
Sbjct: 322 ETSILTGYAKSANVEDAQVVFSQMVEKN-------VIAWNVLIAAYAQNGEEEEAIRL 372
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 97/408 (23%), Positives = 176/408 (43%), Gaps = 82/408 (20%)
Query: 71 LFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSK 130
+ ++++++ + CA G Q+H ++++ V++ +ALV+MY +D+ +
Sbjct: 148 VLNAYSFASALSACAAEKDSRTGEQVHGLVARSPHADDVHIRSALVDMYAKCERPEDARR 207
Query: 131 LFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEA 190
+FD MPERN+V+WN +IT C Y + EA
Sbjct: 208 VFDAMPERNVVSWNSLIT-------------------C------------YEQNGPVGEA 236
Query: 191 LALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLI 250
L LF +M+A ++ P E+T+ +V+ A + + +H + K D+ + N L+
Sbjct: 237 LMLFVEMMAAGFS-PDEVTLSSVMSACAGLAADREGRQVHAHMVKCDRLRDDMVLNNALV 295
Query: 251 DTYAKCG------CIFSA------------------SKLFEDISV-----ERKNLVSWTS 281
D YAKCG CIF + S ED V KN+++W
Sbjct: 296 DMYAKCGRTWEARCIFDSMPSRSIVSETSILTGYAKSANVEDAQVVFSQMVEKNVIAWNV 355
Query: 282 IISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNAC-----------SHGGLVEEG 330
+I+ +A +G +EA+ F ++++ + P T+ +VLNAC +H +++EG
Sbjct: 356 LIAAYAQNGEEEEAIRLFVQLKRDSIWPTHYTYGNVLNACGNIADLQLGQQAHVHVLKEG 415
Query: 331 LNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGAC 390
FD E D+ L+DM + G ++ K + + D V W ++
Sbjct: 416 FR-FDFGPES-----DVFVGNSLVDMYLKTGSIDDGAKVFERMAAR--DNVSWNAMIVGY 467
Query: 391 SFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRR 438
+ +G + + ++L D V M +L+ G G + RR
Sbjct: 468 AQNGRAKDALHLFERMLCSNE--NPDSVTMIGVLSACGHSGLVDEGRR 513
>gi|357142551|ref|XP_003572610.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g06540-like [Brachypodium distachyon]
Length = 454
Score = 243 bits (621), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 134/360 (37%), Positives = 205/360 (56%), Gaps = 7/360 (1%)
Query: 97 HAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGEL 156
HA K G +H V +L+ +Y +LG L + ++FD ++ +WN M++G K G+L
Sbjct: 99 HAQALKCGALAHSVVTNSLLKLYCTLGLLPHARRVFDSGAALDVASWNTMVSGYGKSGDL 158
Query: 157 EFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPA 216
AR +F MP RN+VSW+ +ID EAL++F +M+ E +P + ++++L A
Sbjct: 159 AAAREVFGRMPGRNLVSWSAMIDALVHAEEFGEALSVFDQMMR-EGFKPDVVVLVSMLKA 217
Query: 217 IWQNGDVKSCQLIHGYGEKRGFTA--FDIRVLNCLIDTYAKCGCIFSASKLFEDISVERK 274
G VK + H Y E GF ++ V L+D Y KCGC+ A +F+ V +
Sbjct: 218 CAHLGAVKRGRWAHQYLETEGFAGRQRNVMVETALVDMYCKCGCMEEAWCVFD--GVRYR 275
Query: 275 NLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFF 334
++V W S+I G AM+G G A+E F RM + G PN+ TF L AC+H G V+EG F
Sbjct: 276 DVVLWNSMIGGLAMNGHGDRALELFQRMLQEGFVPNQSTFAGALCACTHTGHVDEGREIF 335
Query: 335 DKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHG 394
M + P +HYGCL D+LGRAGR+ +AE L +P E W L+ +C H
Sbjct: 336 KSMWHH-GIEPQREHYGCLADLLGRAGRVGEAEAVLLDMPME-PHASQWGALMLSCQMHN 393
Query: 395 NVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
++ +GERV ++++E+E +GG Y +++N+ A G + DA +R++M E+ A K G SLV
Sbjct: 394 DITVGERVGKRLIELEPHHGGRYAILFNLYAVNGLWDDARAIRQMMVEKGAKKDAGLSLV 453
>gi|347954524|gb|AEP33762.1| organelle transcript processing 82, partial [Hesperis matronalis]
Length = 672
Score = 243 bits (620), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 142/425 (33%), Positives = 239/425 (56%), Gaps = 46/425 (10%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+N ++ Y+ + +KA L+K++ + + + P D T + ++ CA LG
Sbjct: 175 WNAMISGYAETGNYKKALELFKEMMK------TNVKP--DESTMATVVSACAQSGSIELG 226
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
Q+H+ I+ GF S++ + AL+++Y K
Sbjct: 227 RQVHSWINDHGFGSNLKIVNALIDLYS-------------------------------KC 255
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
GE+E A L E + ++V+SW +I GYT MN EAL LF++M+ T P+++T+L++
Sbjct: 256 GEVETACELLEGLSNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGET-PNDVTMLSI 314
Query: 214 LPAIWQNGDVKSCQLIHGYGEKR--GFTAFDIRVL-NCLIDTYAKCGCIFSASKLFEDIS 270
LPA G + + IH Y +K+ G + L LID YAKCG I +A ++ D S
Sbjct: 315 LPACAHLGAIDIGRWIHVYIDKKLKGVVVTNASSLRTSLIDMYAKCGDIDAAPQV-SDSS 373
Query: 271 VERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEG 330
++L +W ++I GFAMHG A + F RM+K G++P+ +TF+ +L+ACSH G+++ G
Sbjct: 374 AFNRSLSTWNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLG 433
Query: 331 LNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGAC 390
N F M ++ + P ++HYGC+ID+LG +G ++AE+ +P E D V+W +LL AC
Sbjct: 434 RNIFRSMRQDYNITPKLEHYGCMIDLLGHSGLFKEAEEMINTMPME-PDGVIWCSLLKAC 492
Query: 391 SFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERN-AFKVP 449
HGN+E+GE +K++++E G YVL+ NI A G++ + ++R +++++ KVP
Sbjct: 493 KIHGNLELGESFAKKLIKIEPENPGSYVLLSNIYATAGKWNEVXKIRTLLNDKGMKKKVP 552
Query: 450 GCSLV 454
GCS +
Sbjct: 553 GCSSI 557
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 132/450 (29%), Positives = 224/450 (49%), Gaps = 57/450 (12%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNL 92
++N + ++L+ P A LY + + L P F FT+ FL+++CA
Sbjct: 42 IWNIMFRGHALSSDPVSALKLYVVMISL------GLLPNF--FTFPFLLKSCAKSKTFKE 93
Query: 93 GTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVK 152
G Q+H + K+GF +YV+T+L++MY G L+D+ K+FD R++V++ +ITG
Sbjct: 94 GQQIHGHVLKLGFDLDLYVHTSLISMYAQNGRLEDAQKVFDRSSHRDVVSYTALITGYAS 153
Query: 153 WGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILA 212
G +E A+ +F+E+P ++VVSW +I GY +AL LF++M+ +P E T+
Sbjct: 154 RGYIESAQKMFDEIPIKDVVSWNAMISGYAETGNYKKALELFKEMMKTN-VKPDESTMAT 212
Query: 213 VLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVE 272
V+ A Q+G ++ + +H + GF + +++++N LID Y+KCG + +A +L E +S
Sbjct: 213 VVSACAQSGSIELGRQVHSWINDHGFGS-NLKIVNALIDLYSKCGEVETACELLEGLS-- 269
Query: 273 RKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGL- 331
K+++SW ++I G+ + KEA+ F M + G PN VT LS+L AC+H G ++ G
Sbjct: 270 NKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRW 329
Query: 332 --NFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEK--------------------- 368
+ DK ++ V LIDM + G ++ A +
Sbjct: 330 IHVYIDKKLKGVVVTNASSLRTSLIDMYAKCGDIDAAPQVSDSSAFNRSLSTWNAMIFGF 389
Query: 369 -------TALGIPSEI------TDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYG- 414
A I S + D + + LL ACS G +++G + R M + Y
Sbjct: 390 AMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRNIFR---SMRQDYNI 446
Query: 415 ----GDYVLMYNILAGVGRFGDAERLRRVM 440
Y M ++L G F +AE + M
Sbjct: 447 TPKLEHYGCMIDLLGHSGLFKEAEEMINTM 476
Score = 42.4 bits (98), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 68/145 (46%), Gaps = 5/145 (3%)
Query: 262 ASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNAC 321
A +FE ++ N + W + G A+ A++ + M +GL PN TF +L +C
Sbjct: 28 AISVFE--TIPEPNQLIWNIMFRGHALSSDPVSALKLYVVMISLGLLPNFFTFPFLLKSC 85
Query: 322 SHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVV 381
+ +EG +++ L D+ + LI M + GRLE A+K + S DVV
Sbjct: 86 AKSKTFKEGQQIHGHVLKLGFDL-DLYVHTSLISMYAQNGRLEDAQK--VFDRSSHRDVV 142
Query: 382 VWRTLLGACSFHGNVEMGERVTRKI 406
+ L+ + G +E +++ +I
Sbjct: 143 SYTALITGYASRGYIESAQKMFDEI 167
>gi|347954518|gb|AEP33759.1| organelle transcript processing 82, partial [Brassica oleracea]
Length = 691
Score = 243 bits (620), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 139/384 (36%), Positives = 214/384 (55%), Gaps = 37/384 (9%)
Query: 73 DSFTYSFLIRTCATLSHPNLGTQLHAVISKV-GFQSHVYVNTALVNMYVSLGFLKDSSKL 131
D T ++ CA LG ++H ++ GF S + + A + +Y
Sbjct: 214 DEGTLVSVLSACAQSGSIELGREIHTLVDDHHGFGSSLKIVNAFIGLYS----------- 262
Query: 132 FDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEAL 191
K G++E A LFE + C++VVSW +I GYT MN EAL
Sbjct: 263 --------------------KCGDVEIASGLFEGLSCKDVVSWNTLIGGYTHMNLYKEAL 302
Query: 192 ALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVL-NCLI 250
LF++M+ + P+++T+L+VLPA G + + IH Y +KR + L LI
Sbjct: 303 LLFQEMLRSGES-PNDVTMLSVLPACAHLGAIDIGRWIHVYIDKRLKGVTNGSALRTSLI 361
Query: 251 DTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPN 310
D YAKCG I +A ++F S+ K+L SW ++I GFAMHG A + F RM+K G++P+
Sbjct: 362 DMYAKCGDIEAAHQVFN--SMMHKSLSSWNAMIFGFAMHGRANAAFDLFSRMRKNGIEPD 419
Query: 311 RVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTA 370
+T + +L+ACSH GL++ G + F + ++ + P ++HYGC+ID+LG AG ++AE+
Sbjct: 420 DITLVGLLSACSHSGLLDLGRHIFKSVTQDYNITPKLEHYGCMIDLLGHAGLFKEAEEII 479
Query: 371 LGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRF 430
+P E D V+W +LL AC HGN+E+ E +K++E+E G YVL+ NI A GR+
Sbjct: 480 HMMPME-PDGVIWCSLLKACKMHGNLELAESFAQKLMEIEPENSGSYVLLSNIYATAGRW 538
Query: 431 GDAERLRRVMDERNAFKVPGCSLV 454
D R+R V++ + KVPGCS +
Sbjct: 539 EDVARIREVLNGKGMKKVPGCSSI 562
Score = 171 bits (432), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 101/299 (33%), Positives = 168/299 (56%), Gaps = 8/299 (2%)
Query: 73 DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLF 132
+++T+ FL+++CA G Q+HA + K+G + Y +T+L++MY G L+D+ K+F
Sbjct: 82 NAYTFPFLLKSCAKSKTFEEGRQIHAQVMKLGCELDRYAHTSLISMYARNGRLEDARKVF 141
Query: 133 DEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALA 192
D +R++V+ +ITG G++ AR +F+ + R+VVSW +I GY EAL
Sbjct: 142 DXSSQRDVVSCTALITGYASRGDVRSARKVFDXITERDVVSWNAMITGYVENCGYEEALE 201
Query: 193 LFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDT 252
LF++M+ P E T+++VL A Q+G ++ + IH + ++++N I
Sbjct: 202 LFKEMMRTN-VRPDEGTLVSVLSACAQSGSIELGREIHTLVDDHHGFGSSLKIVNAFIGL 260
Query: 253 YAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRV 312
Y+KCG + AS LFE +S K++VSW ++I G+ + KEA+ F M + G PN V
Sbjct: 261 YSKCGDVEIASGLFEGLSC--KDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDV 318
Query: 313 TFLSVLNACSHGGLVEEGL---NFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEK 368
T LSVL AC+H G ++ G + DK ++ ++ LIDM + G +E A +
Sbjct: 319 TMLSVLPACAHLGAIDIGRWIHVYIDKRLKGVTNGSALR--TSLIDMYAKCGDIEAAHQ 375
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 138/302 (45%), Gaps = 21/302 (6%)
Query: 97 HAVISKVGFQSHVYVNTALVNM-YVSLGF--LKDSSKLFDEMPERNLVTWNVMITGLVKW 153
HA + K G + Y + L+ + VS F L + +F+ E NL+ WN M+ GL
Sbjct: 2 HAQMVKTGLHNTNYALSKLLELCVVSPHFDGLPYAVSVFETXQEPNLLIWNTMLRGLASS 61
Query: 154 GELEFARSLFEEMPCR----NVVSWTGIIDGYTRMNRSNEALALFRKM--VACEYTEPSE 207
+L ++ M N ++ ++ + E + ++ + CE +
Sbjct: 62 SDLVSPLEMYVRMVSXGHVPNAYTFPFLLKSCAKSKTFEEGRQIHAQVMKLGCELDRYAH 121
Query: 208 ITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFE 267
+++++ +NG ++ + + +R D+ LI YA G + SA K+F+
Sbjct: 122 TSLISMYA---RNGRLEDARKVFDXSSQR-----DVVSCTALITGYASRGDVRSARKVFD 173
Query: 268 DISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLV 327
I+ +++VSW ++I+G+ + +EA+E F M + ++P+ T +SVL+AC+ G +
Sbjct: 174 XIT--ERDVVSWNAMITGYVENCGYEEALELFKEMMRTNVRPDEGTLVSVLSACAQSGSI 231
Query: 328 EEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLL 387
E G + + +K I + + G +E A G+ + DVV W TL+
Sbjct: 232 ELGREIHTLVDDHHGFGSSLKIVNAFIGLYSKCGDVEIASGLFEGLSCK--DVVSWNTLI 289
Query: 388 GA 389
G
Sbjct: 290 GG 291
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 111/270 (41%), Gaps = 44/270 (16%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+NTL+ Y+ ++A LL+ Q++ SP + T ++ CA L ++G
Sbjct: 285 WNTLIGGYTHMNLYKEALLLF---QEMLRSGESP-----NDVTMLSVLPACAHLGAIDIG 336
Query: 94 TQLHAVISK--VGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLV 151
+H I K G + + T+L++MY G ++ + ++F+ M ++L +WN MI G
Sbjct: 337 RWIHVYIDKRLKGVTNGSALRTSLIDMYAKCGDIEAAHQVFNSMMHKSLSSWNAMIFGFA 396
Query: 152 KWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITIL 211
G R+N A LF +M EP +IT++
Sbjct: 397 MHG-------------------------------RANAAFDLFSRMRK-NGIEPDDITLV 424
Query: 212 AVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISV 271
+L A +G + + I + + C+ID G A ++ + +
Sbjct: 425 GLLSACSHSGLLDLGRHIFKSVTQDYNITPKLEHYGCMIDLLGHAGLFKEAEEIIHMMPM 484
Query: 272 ERKNLVSWTSIISGFAMHGMGKEAVENFGR 301
E ++ W S++ MHG E E+F +
Sbjct: 485 EPDGVI-WCSLLKACKMHG-NLELAESFAQ 512
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 68/150 (45%), Gaps = 7/150 (4%)
Query: 262 ASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNAC 321
A +FE + + NL+ W +++ G A +E + RM G PN TF +L +C
Sbjct: 36 AVSVFE--TXQEPNLLIWNTMLRGLASSSDLVSPLEMYVRMVSXGHVPNAYTFPFLLKSC 93
Query: 322 SHGGLVEEGLNFFDKMVE-ECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDV 380
+ EEG ++++ CE+ D + LI M R GRLE A K + S DV
Sbjct: 94 AKSKTFEEGRQIHAQVMKLGCEL--DRYAHTSLISMYARNGRLEDARK--VFDXSSQRDV 149
Query: 381 VVWRTLLGACSFHGNVEMGERVTRKILEME 410
V L+ + G+V +V I E +
Sbjct: 150 VSCTALITGYASRGDVRSARKVFDXITERD 179
>gi|115436706|ref|NP_001043111.1| Os01g0390600 [Oryza sativa Japonica Group]
gi|21328171|dbj|BAC00748.1| pentatricopeptide (PPR) repeat-containing-like protein [Oryza
sativa Japonica Group]
gi|113532642|dbj|BAF05025.1| Os01g0390600 [Oryza sativa Japonica Group]
Length = 657
Score = 243 bits (620), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 127/374 (33%), Positives = 209/374 (55%), Gaps = 4/374 (1%)
Query: 80 LIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERN 139
L++ C+ S + G QLH VI K GF +H +V L++ Y S F+ + F + +
Sbjct: 282 LVKACSRHSAVSEGQQLHTVILKNGFDAHAFVQATLIHYYGSCDFIDHAQMQFKLSDKSH 341
Query: 140 LVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVA 199
+ +WN ++ L++ + AR LF++MP R+ +SW+ +I GY + SN AL +F M+
Sbjct: 342 VASWNALMASLLRRNLVHEARQLFDDMPERDTISWSTLISGYVQSGNSNMALQIFCSMLD 401
Query: 200 CEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCI 259
EP+EIT+ + L A+ +G + + IH Y R D ++ LI+ YAKCG I
Sbjct: 402 AG-VEPNEITLASALSAVANSGTLGQARWIHDYIISRSIQLTD-KLSAGLINVYAKCGSI 459
Query: 260 FSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVG-LKPNRVTFLSVL 318
A +LF + + ++ W SII A+HG ++E F ++Q +KPN +T+L VL
Sbjct: 460 AEAVQLFNHVKDKSISVSPWNSIICNLAIHGYVNMSLELFSQLQSTTHIKPNSITYLGVL 519
Query: 319 NACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEIT 378
NAC H G+V EG F+ M ++ + P+IKHYGC++D+L RAG LE+AE +P +
Sbjct: 520 NACCHAGMVAEGKRQFESMRQQYGIQPEIKHYGCMVDLLCRAGYLEEAELLIKTMPMK-A 578
Query: 379 DVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRR 438
DVV W +L A GNV +GE+ ++ +++ +G + + N+ A G + + +R+
Sbjct: 579 DVVAWGCILAAARTQGNVALGEKAAEELSKLDPSHGASKIALSNLYADAGHWSNVSVVRK 638
Query: 439 VMDERNAFKVPGCS 452
+ N ++ G S
Sbjct: 639 ELQNENLERLTGSS 652
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/333 (25%), Positives = 148/333 (44%), Gaps = 35/333 (10%)
Query: 97 HAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGEL 156
H V + G V V T LV+ Y ++ + + +F+ MP+RN VTWN M+ VK G +
Sbjct: 166 HGVAVRRGLDGFVIVATNLVHAYGAVSQVPSARSIFELMPDRNTVTWNTMLNCYVKAGMI 225
Query: 157 EFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPA 216
A +F +P R+ VSW +IDGY + +AL + MV +E+ ++ ++ A
Sbjct: 226 NMAAEVFGVIPERDEVSWLTMIDGYMCADFLLQALRTYVAMVGTVGIRANEVILVGLVKA 285
Query: 217 IWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKC-------------------- 256
++ V Q +H K GF A V LI Y C
Sbjct: 286 CSRHSAVSEGQQLHTVILKNGFDAHAF-VQATLIHYYGSCDFIDHAQMQFKLSDKSHVAS 344
Query: 257 -----------GCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKV 305
+ A +LF+D+ ++ +SW+++ISG+ G A++ F M
Sbjct: 345 WNALMASLLRRNLVHEARQLFDDM--PERDTISWSTLISGYVQSGNSNMALQIFCSMLDA 402
Query: 306 GLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQ 365
G++PN +T S L+A ++ G + + D ++ L D K LI++ + G + +
Sbjct: 403 GVEPNEITLASALSAVANSGTLGQARWIHDYIISRSIQLTD-KLSAGLINVYAKCGSIAE 461
Query: 366 AEKTALGIPSEITDVVVWRTLLGACSFHGNVEM 398
A + + + V W +++ + HG V M
Sbjct: 462 AVQLFNHVKDKSISVSPWNSIICNLAIHGYVNM 494
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 113/437 (25%), Positives = 183/437 (41%), Gaps = 86/437 (19%)
Query: 75 FTYSFLIRTCATLSHPNLGTQLHAVISKVGF-QSHVYVNTALVNMYV----SLGFLKDSS 129
F S L A LSH G QLHA+ +K G S+++V +L+ Y SL +
Sbjct: 12 FLVSSLKSAAARLSH---GEQLHALAAKSGLLTSNLFVRNSLLAFYSRVAPSLAY----- 63
Query: 130 KLFDEMPE--RNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRS 187
LFDE+P R+ N++++ L + G LE A+ L EMP R+ VS+T +I +R
Sbjct: 64 HLFDEIPPLLRDATAHNILLSALARAGRLERAQCLLAEMPQRDAVSFTTVISALSRSGHP 123
Query: 188 NEALALFRKMVACEYTEPSEITILAVLPAIW-QNGDVKSCQLIHGYGEKRGFTAFDIRVL 246
ALA+FR M+ E +P+E+T+ VL A+ +G HG +RG F I
Sbjct: 124 ERALAVFRDMLT-EAVQPNEVTLAEVLTAMACDHGAPAPVGAAHGVAVRRGLDGFVIVAT 182
Query: 247 NCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQK-- 304
N L+ Y + SA +FE + +N V+W ++++ + GM A E FG + +
Sbjct: 183 N-LVHAYGAVSQVPSARSIFE--LMPDRNTVTWNTMLNCYVKAGMINMAAEVFGVIPERD 239
Query: 305 ------------------------------VGLKPNRVTFLSVLNACSHGGLVEEGL--- 331
VG++ N V + ++ ACS V EG
Sbjct: 240 EVSWLTMIDGYMCADFLLQALRTYVAMVGTVGIRANEVILVGLVKACSRHSAVSEGQQLH 299
Query: 332 -----NFFD----------------KMVEECEV---LPDIKH---YGCLIDMLGRAGRLE 364
N FD ++ ++ L D H + L+ L R +
Sbjct: 300 TVILKNGFDAHAFVQATLIHYYGSCDFIDHAQMQFKLSDKSHVASWNALMASLLRRNLVH 359
Query: 365 QAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNIL 424
+A + +P D + W TL+ GN M ++ +L+ G + + + + L
Sbjct: 360 EARQLFDDMPER--DTISWSTLISGYVQSGNSNMALQIFCSMLDA--GVEPNEITLASAL 415
Query: 425 AGVGRFGDAERLRRVMD 441
+ V G + R + D
Sbjct: 416 SAVANSGTLGQARWIHD 432
>gi|297833228|ref|XP_002884496.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330336|gb|EFH60755.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 547
Score = 243 bits (620), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 151/478 (31%), Positives = 242/478 (50%), Gaps = 75/478 (15%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNL 92
++N+++ YS + +P KA + Y Q++ +SP D FT+ ++++ C+ L
Sbjct: 73 IWNSMIRGYSNSPNPDKALIFY---QEMLRKGYSP-----DYFTFPYVLKACSGLRDIQF 124
Query: 93 GTQLHAVISKVGFQSHVYVNTALVNMYVSL--------------------------GFLK 126
G+ +H + K GF+ ++YV+T L++MY+ GF+
Sbjct: 125 GSCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNWGLRVFEDIPKLNVVAWGSLISGFVN 184
Query: 127 -----DSSKLFDEMP------------------------------ERNLVTWNVMITGLV 151
D+ + F EM E N++ +I
Sbjct: 185 NNRFSDAIEAFREMQSIGVKPNETIMVDLLVACGRCFDPYCQSKFEFNVILATSLIDMYA 244
Query: 152 KWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITIL 211
K G++ AR LF+ MP RN+VSW II GY++ + EA+ +F M+ P ++T
Sbjct: 245 KCGDMRTARYLFDGMPERNLVSWNSIITGYSQNGDAEEAMCMFSDMLDLGIA-PDKVTFF 303
Query: 212 AVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISV 271
+V+ A G + Q IH Y K GF D ++ L++ YAK G SA K+FED+
Sbjct: 304 SVIRASMIQGCSQLGQTIHAYVSKTGFVK-DAAIVCALVNMYAKTGNAESAKKMFEDL-- 360
Query: 272 ERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVG-LKPNRVTFLSVLNACSHGGLVEEG 330
E+K+ ++WT +I G A HG G +A+ F RMQ+ G P+ +T+L VL ACSH GLVEEG
Sbjct: 361 EKKDTIAWTVVIIGLASHGHGNKALSIFQRMQEEGNATPDGITYLGVLYACSHIGLVEEG 420
Query: 331 LNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGAC 390
+F +M + + P ++HYGC++D+L RAGR E+AE+ +P + T +W LL C
Sbjct: 421 QRYFAEMRDLYGLEPTVEHYGCMVDILSRAGRFEEAERLVKTMPVQPT-ANIWGALLNGC 479
Query: 391 SFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKV 448
H N+++ +R+ + E E G YVL+ NI A GR+ D + +R M + K+
Sbjct: 480 EIHENLDLADRIRSMVSESEELGSGIYVLLSNIYAKAGRWADVKLIRESMKSKRVDKL 537
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 82/302 (27%), Positives = 145/302 (48%), Gaps = 21/302 (6%)
Query: 123 GFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYT 182
G + SS + + +P L+ + T + L +ARS+FE + C +V W +I GY+
Sbjct: 26 GLMIKSSVIRNVIPLSRLIDF---CTTCPETMNLSYARSVFESIDCPSVYIWNSMIRGYS 82
Query: 183 RMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFD 242
++AL +++M+ Y+ P T VL A D++ +HG+ K GF +
Sbjct: 83 NSPNPDKALIFYQEMLRKGYS-PDYFTFPYVLKACSGLRDIQFGSCVHGFVVKTGFEV-N 140
Query: 243 IRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRM 302
+ V CL+ Y CG + ++FEDI + N+V+W S+ISGF + +A+E F M
Sbjct: 141 MYVSTCLLHMYMCCGEVNWGLRVFEDIP--KLNVVAWGSLISGFVNNNRFSDAIEAFREM 198
Query: 303 QKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGR 362
Q +G+KPN + +L AC FD + + ++ LIDM + G
Sbjct: 199 QSIGVKPNETIMVDLLVACGR---------CFDPYCQS-KFEFNVILATSLIDMYAKCGD 248
Query: 363 LEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYN 422
+ A G+P ++V W +++ S +G+ E + +L++ G D V ++
Sbjct: 249 MRTARYLFDGMPER--NLVSWNSIITGYSQNGDAEEAMCMFSDMLDL--GIAPDKVTFFS 304
Query: 423 IL 424
++
Sbjct: 305 VI 306
>gi|414869795|tpg|DAA48352.1| TPA: hypothetical protein ZEAMMB73_382586 [Zea mays]
Length = 687
Score = 243 bits (620), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 147/443 (33%), Positives = 221/443 (49%), Gaps = 67/443 (15%)
Query: 74 SFTYSFLIRTCATLS-HPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSK-- 130
+FTYSFLI+ A P G H V K+G +V AL++ Y L D+ K
Sbjct: 202 TFTYSFLIKALAAAGLTPVRGAHAHVV--KLGSAEDTFVGNALIDAYSKNQGLSDAKKVF 259
Query: 131 -----------------------------LFDEMPERNLVTWNVMITGLVKWGELEFARS 161
+FDEMPE++ V+WN M+ G K GE E A
Sbjct: 260 DEMTTRDVVSWNTAMAAMVRQGEVDAARSMFDEMPEKDTVSWNTMLDGYAKAGEAEKAFE 319
Query: 162 LFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKM------------VACE-------- 201
LF+ MP RNVVSW+ ++ Y + A +F KM AC
Sbjct: 320 LFQRMPGRNVVSWSTVVSAYCKKGDMEMARVIFDKMPAKNLVTWTIMVSACAQKGLVEEA 379
Query: 202 ---YTEPSE-------ITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLID 251
+TE + I ++++L A ++G + + IH + +R + + V N L+D
Sbjct: 380 GRLFTEMMDAAIELDVIAVVSILAACAESGSLALGKRIHRHVRQRKLSRSTL-VCNALMD 438
Query: 252 TYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNR 311
+ KCGC+ A +F D + K+LVSW II GFAMHG G++A+E F +M++ G P+
Sbjct: 439 MFCKCGCVNRADYIF-DTEIVEKDLVSWNIIIGGFAMHGPGEKALELFAQMKQQGFHPDA 497
Query: 312 VTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTAL 371
VT ++VL+AC+H GLVEEG FF M + + P I+HYGC++D+LGR G +++A
Sbjct: 498 VTLINVLSACTHMGLVEEGRRFFANMETDYGIKPQIEHYGCMVDLLGRGGLIKEAVDMIK 557
Query: 372 GIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFG 431
+P E + V+W +LL AC H NVE E ++ ++ G+Y ++ NI A G++
Sbjct: 558 RMPWEPNE-VIWGSLLSACRLHKNVEYAELAVNELSNLQPSSAGNYAVLSNIYAEAGKWS 616
Query: 432 DAERLRRVMDERNAFKVPGCSLV 454
D + R M + K G S +
Sbjct: 617 DMAKARVQMKGTGSQKTAGSSWI 639
>gi|357150199|ref|XP_003575376.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g33350-like [Brachypodium distachyon]
Length = 523
Score = 243 bits (620), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 132/386 (34%), Positives = 220/386 (56%), Gaps = 7/386 (1%)
Query: 70 PLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSS 129
P + F Y ++R + L +H+ K GF ++ + T+L++ Y G + D+
Sbjct: 109 PAPNQFVYPLVLRAACAIG-VQLVRSIHSHACKSGFHAYDVIRTSLLDGYSRYGMMLDAR 167
Query: 130 KLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNE 189
KLFD + ERN+++W +++G + G++ A LF+ MP R+V +W +I G T+ E
Sbjct: 168 KLFDGLTERNVISWTALVSGYARAGKIGDAIVLFDRMPERDVAAWNAMITGCTQNGLFVE 227
Query: 190 ALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCL 249
A+ + +MV E + + T+ VL A G +K +++HGY R F V+N L
Sbjct: 228 AVGICSRMVD-EGFQLNGTTVSCVLSACGHLGMLKIGKVVHGYAW-RSCVGFGSSVVNGL 285
Query: 250 IDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKP 309
ID Y KCG + A +F++ S ++L +W S+I+ A+HG K A+ F M+ G++P
Sbjct: 286 IDMYGKCGNLKEARWMFDEFS--DRSLTTWNSLINCLALHGHSKSAIAVFDEMRDEGIEP 343
Query: 310 NRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKT 369
+ VTF+ +LNAC+HGG V+EGL +F M +E + P+I+HYGC++D+LGRAGR E A
Sbjct: 344 DVVTFVGLLNACTHGGFVDEGLTYFKLMCDELRIEPEIEHYGCIVDLLGRAGRFEDAMNV 403
Query: 370 ALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGR 429
+ + D V+W +LL AC H +E+ E RK+L++ V++ N+ + G
Sbjct: 404 INDMKVQ-PDEVIWGSLLNACRTHRQLELAEFSVRKLLQLNPNNANYVVMLANLYSEGGS 462
Query: 430 FGDAERLRRVMDER-NAFKVPGCSLV 454
+ + ++R++M E K+PGCS +
Sbjct: 463 WEEVTKIRKLMKEDIMGKKLPGCSWI 488
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 127/283 (44%), Gaps = 58/283 (20%)
Query: 156 LEFARSLFEEMPCRNVVSWTGII----DGYTRMNRSNEALALFRKMVACEYTEPSEITIL 211
L +AR LF+ P NV ++ ++ ++ALALF +M+ P++
Sbjct: 58 LPYARRLFDSTPHPNVFLYSAMLSAYAAASPAQAYGHDALALFLRMLRRGRPAPNQFVYP 117
Query: 212 AVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISV 271
VL A G V+ + IH + K GF A+D+ + L+D Y++ G + A KLF+ ++
Sbjct: 118 LVLRAACAIG-VQLVRSIHSHACKSGFHAYDV-IRTSLLDGYSRYGMMLDARKLFDGLT- 174
Query: 272 ERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNR--VTFLSVLNACSHGGLVEE 329
+N++SWT+++SG+A G +A+ F RM P R + +++ C+ GL E
Sbjct: 175 -ERNVISWTALVSGYARAGKIGDAIVLFDRM------PERDVAAWNAMITGCTQNGLFVE 227
Query: 330 GLNFFDKMVEE----------CEVLPDIKHYGC-------------------------LI 354
+ +MV+E C VL H G LI
Sbjct: 228 AVGICSRMVDEGFQLNGTTVSC-VLSACGHLGMLKIGKVVHGYAWRSCVGFGSSVVNGLI 286
Query: 355 DMLGRAGRLEQAEKTALGIPSEITD--VVVWRTLLGACSFHGN 395
DM G+ G L++A + E +D + W +L+ + HG+
Sbjct: 287 DMYGKCGNLKEAR----WMFDEFSDRSLTTWNSLINCLALHGH 325
>gi|413937223|gb|AFW71774.1| hypothetical protein ZEAMMB73_242527 [Zea mays]
Length = 625
Score = 243 bits (620), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 137/362 (37%), Positives = 209/362 (57%), Gaps = 9/362 (2%)
Query: 97 HAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNL--VTWNVMITGLVKWG 154
H K G +H V L+ +Y +LG L D+ ++FD +L +WN M++G K G
Sbjct: 139 HGQALKHGALAHPVVTNCLLKLYCALGMLSDARRVFDTSGATSLDAFSWNTMVSGYGKCG 198
Query: 155 ELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVL 214
+LE AR +F MP R +VSW+ +ID R +EAL +F +M+ + P + + +VL
Sbjct: 199 DLEAAREVFVRMPERGLVSWSAMIDACIRAGEFSEALRMFDQMMGNGF-RPDAVVLSSVL 257
Query: 215 PAIWQNGDVKSCQLIHGY--GEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVE 272
A G ++ + +H + E G + ++ + L+D Y KCGC+ A +F+ V+
Sbjct: 258 KACAHLGALERGRWVHRFLKAEGLGRSPDNVMLETALVDMYCKCGCMDEAWWVFD--GVQ 315
Query: 273 RKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLN 332
+++V W ++I G AM+G GK A+E F RM +G PN TF+ VL AC+H G V+EG
Sbjct: 316 SQDVVLWNAMIGGLAMNGHGKRALELFRRMLDMGFVPNESTFVVVLCACTHTGRVDEGKE 375
Query: 333 FFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSF 392
F M + + P +HYGCL D+LGRAG LE+AE L +P E W L+ +C
Sbjct: 376 IFRSMCDH-GIEPRREHYGCLADLLGRAGLLEEAEAVLLDMPME-PHASQWGALMSSCLM 433
Query: 393 HGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCS 452
H NV +GERV +K++E+E GG YV+++N+ A G + DA+ LR++M+ER A K G S
Sbjct: 434 HNNVGVGERVGKKLIELEPDDGGRYVVLFNLYAVNGLWEDAKALRKMMEERGAKKETGLS 493
Query: 453 LV 454
+
Sbjct: 494 FI 495
>gi|310656753|gb|ADP02188.1| PPR domain-containing protein [Triticum aestivum]
Length = 788
Score = 243 bits (620), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 135/378 (35%), Positives = 216/378 (57%), Gaps = 6/378 (1%)
Query: 77 YSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMP 136
+S ++ CA+L G ++HA K+G ++V+V+ +L++MY D+ +FD +P
Sbjct: 382 FSSVLSACASLEDLRGGARIHARSLKMGSSTNVFVSCSLIDMYCKCNKCGDAQTIFDTLP 441
Query: 137 ERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRK 196
++N+V WN +++G G++ A LF++MP RN+ SW II GY + + +AL F
Sbjct: 442 QKNIVCWNSLVSGYSYNGKMVEAMYLFKKMPARNLASWNTIISGYAQNRQFVDALKSFNA 501
Query: 197 MVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKC 256
M+A P EIT +VL A + + ++ H K G I + L D YAK
Sbjct: 502 MLASGQV-PGEITFSSVLLACANLCSLVTGKMAHAKTIKLGIEE-SIFIGTALSDMYAKS 559
Query: 257 GCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLS 316
G + S+ ++F + +N V+WT++I G A +G +E++ F M G+ PN TFL+
Sbjct: 560 GDLQSSKRMF--YQMPERNDVTWTAMIQGLAENGFAEESILLFEDMMATGMTPNEHTFLA 617
Query: 317 VLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSE 376
+L ACSHGGLVE+ +++FDKM + + P KHY C++D+L RAGRL +AE + PS+
Sbjct: 618 LLFACSHGGLVEQAIHYFDKM-QALGISPKEKHYTCMVDVLARAGRLAEAEALLMKTPSK 676
Query: 377 ITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERL 436
++ W LL AC+ + N E+ ER +++ E+ + YVL+ N+ A GR+ DA R+
Sbjct: 677 -SEANSWAALLSACNTYRNEEIAERAAKRLHELAKDNTAGYVLLSNMYASCGRWKDAARI 735
Query: 437 RRVMDERNAFKVPGCSLV 454
R +M K GCS V
Sbjct: 736 RVLMKGTTLKKDGGCSWV 753
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 85/314 (27%), Positives = 142/314 (45%), Gaps = 39/314 (12%)
Query: 115 LVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSW 174
+V+ +V G + + +LFD MP+R +V++ M+ L+K G + A L+E+ P +V +
Sbjct: 155 MVSEHVKAGDIASARRLFDGMPDRTVVSYTTMVDALMKRGRVAEAVELYEQCPSGSVAFF 214
Query: 175 TGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGE 234
T I G+ R + AL +FRKM++C P+ ITI+ ++ A G+ I G
Sbjct: 215 TATISGFVRNELHHNALGVFRKMLSCR-VRPNGITIVCMIKACVGAGEFGLALSIVGLAI 273
Query: 235 KRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVE---------------------- 272
K F I V N LI Y + G +A K+F+++ V+
Sbjct: 274 KSNFFESSIEVQNSLITLYLRMGDAAAARKVFDEMDVKDVVSWTALLDVYSESGDLDGAR 333
Query: 273 -------RKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGG 325
+N VSW ++I+ G EAV+ + +M G +PN F SVL+AC+
Sbjct: 334 RVLDAMPERNEVSWGTLIARHEQRGNAAEAVKLYSQMLADGCRPNISCFSSVLSACASLE 393
Query: 326 LVEEGLNFFD---KMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVV 382
+ G KM V LIDM + + A+ +P + ++V
Sbjct: 394 DLRGGARIHARSLKMGSSTNVFVSCS----LIDMYCKCNKCGDAQTIFDTLPQK--NIVC 447
Query: 383 WRTLLGACSFHGNV 396
W +L+ S++G +
Sbjct: 448 WNSLVSGYSYNGKM 461
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 84/322 (26%), Positives = 151/322 (46%), Gaps = 34/322 (10%)
Query: 105 FQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFE 164
F+S + V +L+ +Y+ +G + K+FDEM +++V+W ++ + G+L+ AR + +
Sbjct: 278 FESSIEVQNSLITLYLRMGDAAAARKVFDEMDVKDVVSWTALLDVYSESGDLDGARRVLD 337
Query: 165 EMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVK 224
MP RN VSW +I + + + EA+ L+ +M+A + P+ +VL A D++
Sbjct: 338 AMPERNEVSWGTLIARHEQRGNAAEAVKLYSQMLA-DGCRPNISCFSSVLSACASLEDLR 396
Query: 225 SCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDI--------------- 269
IH K G ++ ++ V LID Y KC A +F+ +
Sbjct: 397 GGARIHARSLKMG-SSTNVFVSCSLIDMYCKCNKCGDAQTIFDTLPQKNIVCWNSLVSGY 455
Query: 270 --------------SVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFL 315
+ +NL SW +IISG+A + +A+++F M G P +TF
Sbjct: 456 SYNGKMVEAMYLFKKMPARNLASWNTIISGYAQNRQFVDALKSFNAMLASGQVPGEITFS 515
Query: 316 SVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPS 375
SVL AC++ + G K + + + I L DM ++G L+ +++ +P
Sbjct: 516 SVLLACANLCSLVTGKMAHAKTI-KLGIEESIFIGTALSDMYAKSGDLQSSKRMFYQMP- 573
Query: 376 EITDVVVWRTLLGACSFHGNVE 397
E D V W ++ + +G E
Sbjct: 574 ERND-VTWTAMIQGLAENGFAE 594
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 94/212 (44%), Gaps = 36/212 (16%)
Query: 75 FTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDE 134
T+S ++ CA L G HA K+G + +++ TAL +MY G L+ S ++F +
Sbjct: 512 ITFSSVLLACANLCSLVTGKMAHAKTIKLGIEESIFIGTALSDMYAKSGDLQSSKRMFYQ 571
Query: 135 MPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALF 194
MPERN VTW MI GL + G E E++ LF
Sbjct: 572 MPERNDVTWTAMIQGLAENGFAE-------------------------------ESILLF 600
Query: 195 RKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGF-TAFDIRVLNCLIDTY 253
M+A T P+E T LA+L A G V+ Q IH + + + + + C++D
Sbjct: 601 EDMMATGMT-PNEHTFLALLFACSHGGLVE--QAIHYFDKMQALGISPKEKHYTCMVDVL 657
Query: 254 AKCGCIFSASKLFEDISVERKNLVSWTSIISG 285
A+ G + A L + + SW +++S
Sbjct: 658 ARAGRLAEAEALLMK-TPSKSEANSWAALLSA 688
>gi|125570503|gb|EAZ12018.1| hypothetical protein OsJ_01900 [Oryza sativa Japonica Group]
Length = 657
Score = 243 bits (620), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 127/374 (33%), Positives = 209/374 (55%), Gaps = 4/374 (1%)
Query: 80 LIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERN 139
L++ C+ S + G QLH VI K GF +H +V L++ Y S F+ + F + +
Sbjct: 282 LVKACSRHSAVSEGQQLHTVILKNGFDAHAFVQATLIHYYGSCDFIDHAQMQFKLSDKSH 341
Query: 140 LVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVA 199
+ +WN ++ L++ + AR LF++MP R+ +SW+ +I GY + SN AL +F M+
Sbjct: 342 VASWNALMASLLRRNLVHEARQLFDDMPERDTISWSTLISGYVQSGNSNMALQIFCSMLD 401
Query: 200 CEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCI 259
EP+EIT+ + L A+ +G + + IH Y R D ++ LI+ YAKCG I
Sbjct: 402 AG-VEPNEITLASALSAVANSGTLGQARWIHDYIISRSIQLTD-KLSAGLINVYAKCGSI 459
Query: 260 FSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVG-LKPNRVTFLSVL 318
A +LF + + ++ W SII A+HG ++E F ++Q +KPN +T+L VL
Sbjct: 460 AEAVQLFNHVKDKSISVSPWNSIICNLAIHGYVNMSLELFSQLQSTTHIKPNSITYLGVL 519
Query: 319 NACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEIT 378
NAC H G+V EG F+ M ++ + P+IKHYGC++D+L RAG LE+AE +P +
Sbjct: 520 NACCHAGMVAEGKRQFESMRQQYGIQPEIKHYGCMVDLLCRAGYLEEAELLIKTMPMK-A 578
Query: 379 DVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRR 438
DVV W +L A GNV +GE+ ++ +++ +G + + N+ A G + + +R+
Sbjct: 579 DVVAWGCILAAARTQGNVALGEKAAEELSKLDPSHGASKIALSNLYADAGHWSNVSVVRK 638
Query: 439 VMDERNAFKVPGCS 452
+ N ++ G S
Sbjct: 639 ELQNENLERLTGSS 652
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/333 (25%), Positives = 148/333 (44%), Gaps = 35/333 (10%)
Query: 97 HAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGEL 156
H V + G V V T LV+ Y ++ + + +F+ MP+RN VTWN M+ VK G +
Sbjct: 166 HGVAVRRGLDGFVIVATNLVHAYGAVSQVPSARSIFELMPDRNTVTWNTMLNCYVKAGMI 225
Query: 157 EFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPA 216
A +F +P R+ VSW +IDGY + +AL + MV +E+ ++ ++ A
Sbjct: 226 NMAAEVFGVIPERDEVSWLTMIDGYMCADFLLQALRTYVAMVGTVGIRANEVILVGLVKA 285
Query: 217 IWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKC-------------------- 256
++ V Q +H K GF A V LI Y C
Sbjct: 286 CSRHSAVSEGQQLHTVILKNGFDAHAF-VQATLIHYYGSCDFIDHAQMQFKLSDKSHVAS 344
Query: 257 -----------GCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKV 305
+ A +LF+D+ ++ +SW+++ISG+ G A++ F M
Sbjct: 345 WNALMASLLRRNLVHEARQLFDDM--PERDTISWSTLISGYVQSGNSNMALQIFCSMLDA 402
Query: 306 GLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQ 365
G++PN +T S L+A ++ G + + D ++ L D G LI++ + G + +
Sbjct: 403 GVEPNEITLASALSAVANSGTLGQARWIHDYIISRSIQLTDKLSAG-LINVYAKCGSIAE 461
Query: 366 AEKTALGIPSEITDVVVWRTLLGACSFHGNVEM 398
A + + + V W +++ + HG V M
Sbjct: 462 AVQLFNHVKDKSISVSPWNSIICNLAIHGYVNM 494
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 113/437 (25%), Positives = 183/437 (41%), Gaps = 86/437 (19%)
Query: 75 FTYSFLIRTCATLSHPNLGTQLHAVISKVGF-QSHVYVNTALVNMYV----SLGFLKDSS 129
F S L A LSH G QLHA+ +K G S+++V +L+ Y SL +
Sbjct: 12 FLVSSLKSAAARLSH---GEQLHALAAKSGLLTSNLFVRNSLLAFYSRVAPSLAY----- 63
Query: 130 KLFDEMPE--RNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRS 187
LFDE+P R+ N++++ L + G LE A+ L EMP R+ VS+T +I +R
Sbjct: 64 HLFDEIPPLLRDATAQNILLSALARAGRLERAQCLLAEMPQRDAVSFTTVISALSRSGHP 123
Query: 188 NEALALFRKMVACEYTEPSEITILAVLPAIW-QNGDVKSCQLIHGYGEKRGFTAFDIRVL 246
ALA+FR M+ E +P+E+T+ VL A+ +G HG +RG F I
Sbjct: 124 ERALAVFRDMLT-EAVQPNEVTLAEVLTAMACDHGAPAPVGAAHGVAVRRGLDGFVIVAT 182
Query: 247 NCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQK-- 304
N L+ Y + SA +FE + +N V+W ++++ + GM A E FG + +
Sbjct: 183 N-LVHAYGAVSQVPSARSIFE--LMPDRNTVTWNTMLNCYVKAGMINMAAEVFGVIPERD 239
Query: 305 ------------------------------VGLKPNRVTFLSVLNACSHGGLVEEGL--- 331
VG++ N V + ++ ACS V EG
Sbjct: 240 EVSWLTMIDGYMCADFLLQALRTYVAMVGTVGIRANEVILVGLVKACSRHSAVSEGQQLH 299
Query: 332 -----NFFD----------------KMVEECEV---LPDIKH---YGCLIDMLGRAGRLE 364
N FD ++ ++ L D H + L+ L R +
Sbjct: 300 TVILKNGFDAHAFVQATLIHYYGSCDFIDHAQMQFKLSDKSHVASWNALMASLLRRNLVH 359
Query: 365 QAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNIL 424
+A + +P D + W TL+ GN M ++ +L+ G + + + + L
Sbjct: 360 EARQLFDDMPER--DTISWSTLISGYVQSGNSNMALQIFCSMLDA--GVEPNEITLASAL 415
Query: 425 AGVGRFGDAERLRRVMD 441
+ V G + R + D
Sbjct: 416 SAVANSGTLGQARWIHD 432
>gi|108710611|gb|ABF98406.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 787
Score = 243 bits (620), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 135/378 (35%), Positives = 218/378 (57%), Gaps = 6/378 (1%)
Query: 77 YSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMP 136
+S ++ CA+L G ++H K+ ++V+V++AL++MY L D+ +F +P
Sbjct: 381 FSSVLGACASLQDLRSGRKIHNQTLKMACSNNVFVSSALIDMYCKCKQLPDAQMIFYSLP 440
Query: 137 ERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRK 196
++N+V WN +I+G ++ A LF++MP RNV SW II GY + + +AL F
Sbjct: 441 QKNIVCWNSLISGYSNNSKMVEAEELFKKMPARNVASWNSIISGYAQNRQFIDALKSFHA 500
Query: 197 MVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKC 256
M+A + P EIT +VL A ++ +++H K G I V L D YAK
Sbjct: 501 MLASGQS-PGEITFSSVLLACASLCSLEMGKMVHAKIIKLGIKE-SIFVGTALSDMYAKS 558
Query: 257 GCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLS 316
G + S+ ++F ++ ++N V+WT++I G A +G +E++ F M G+ PN TFL+
Sbjct: 559 GDLDSSKRVFYEM--PKRNDVAWTAMIQGLAENGFAEESILLFEDMISAGITPNEQTFLA 616
Query: 317 VLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSE 376
+L ACSH GLVE +++F+ M++ C + P KHY C++D+L RAG L +AE L I S+
Sbjct: 617 ILFACSHSGLVEHAMHYFE-MMQACGISPKAKHYTCMVDVLARAGHLAEAEDLLLKIESK 675
Query: 377 ITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERL 436
++ W LL AC+ + N EMGER +++ E+++ YVL+ N+ A G++ DA +
Sbjct: 676 -SEANSWAALLSACNIYRNKEMGERAAKRLQELDKDNTAGYVLLSNMYASCGKWKDAAEM 734
Query: 437 RRVMDERNAFKVPGCSLV 454
R +M N K GCS V
Sbjct: 735 RILMKGINLKKDGGCSWV 752
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 97/399 (24%), Positives = 178/399 (44%), Gaps = 51/399 (12%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNL 92
F ++ + L E P+ A ++ ++ + SP + T +I+ C +L
Sbjct: 212 FFTAMIAGFVLNELPKDALGVF---HEMLSCGVSP-----NEITLVSVIKACIGAGEFDL 263
Query: 93 GTQLHAVISKVGF-QSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLV 151
+ + K ++ V +L+ +Y+ G + ++FDEM R++V+W ++
Sbjct: 264 AMSIVGLAMKSNLLDKNLGVRNSLITLYLRKGDADAARRMFDEMEVRDVVSWTALLDVYA 323
Query: 152 KWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITIL 211
+ G+LE AR + +EMP RN VSW ++ + + + EA++L+ +M+A + P+
Sbjct: 324 ELGDLEGARRVLDEMPERNEVSWGTLVARHEQKGNAKEAVSLYSQMLA-DGCRPNISCFS 382
Query: 212 AVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDI-- 269
+VL A D++S + IH K + ++ V + LID Y KC + A +F +
Sbjct: 383 SVLGACASLQDLRSGRKIHNQTLKMACSN-NVFVSSALIDMYCKCKQLPDAQMIFYSLPQ 441
Query: 270 ---------------------------SVERKNLVSWTSIISGFAMHGMGKEAVENFGRM 302
+ +N+ SW SIISG+A + +A+++F M
Sbjct: 442 KNIVCWNSLISGYSNNSKMVEAEELFKKMPARNVASWNSIISGYAQNRQFIDALKSFHAM 501
Query: 303 QKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHY----GCLIDMLG 358
G P +TF SVL AC+ +E G KMV + IK L DM
Sbjct: 502 LASGQSPGEITFSSVLLACASLCSLEMG-----KMVHAKIIKLGIKESIFVGTALSDMYA 556
Query: 359 RAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVE 397
++G L+ +++ +P + V W ++ + +G E
Sbjct: 557 KSGDLDSSKRVFYEMPKR--NDVAWTAMIQGLAENGFAE 593
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/322 (24%), Positives = 149/322 (46%), Gaps = 35/322 (10%)
Query: 115 LVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSW 174
+V +V G + + +LFD MPER++V++ M+ L+K G + A L+ + P +V +
Sbjct: 154 MVREHVKAGDIVSARRLFDGMPERSVVSYTTMVDALMKRGSVRDAVELYRQCPLCSVPFF 213
Query: 175 TGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGE 234
T +I G+ +AL +F +M++C + P+EIT+++V+ A G+ I G
Sbjct: 214 TAMIAGFVLNELPKDALGVFHEMLSCGVS-PNEITLVSVIKACIGAGEFDLAMSIVGLAM 272
Query: 235 KRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVE---------------------- 272
K ++ V N LI Y + G +A ++F+++ V
Sbjct: 273 KSNLLDKNLGVRNSLITLYLRKGDADAARRMFDEMEVRDVVSWTALLDVYAELGDLEGAR 332
Query: 273 -------RKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGG 325
+N VSW ++++ G KEAV + +M G +PN F SVL AC+
Sbjct: 333 RVLDEMPERNEVSWGTLVARHEQKGNAKEAVSLYSQMLADGCRPNISCFSSVLGACASLQ 392
Query: 326 LVEEGLNFFDKMVE-ECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWR 384
+ G ++ ++ C ++ LIDM + +L A+ +P + ++V W
Sbjct: 393 DLRSGRKIHNQTLKMACS--NNVFVSSALIDMYCKCKQLPDAQMIFYSLPQK--NIVCWN 448
Query: 385 TLLGACSFHGNVEMGERVTRKI 406
+L+ S + + E + +K+
Sbjct: 449 SLISGYSNNSKMVEAEELFKKM 470
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 105/234 (44%), Gaps = 39/234 (16%)
Query: 75 FTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDE 134
T+S ++ CA+L +G +HA I K+G + ++V TAL +MY G L S ++F E
Sbjct: 511 ITFSSVLLACASLCSLEMGKMVHAKIIKLGIKESIFVGTALSDMYAKSGDLDSSKRVFYE 570
Query: 135 MPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALF 194
MP+RN V W MI GL + G E E++ LF
Sbjct: 571 MPKRNDVAWTAMIQGLAENGFAE-------------------------------ESILLF 599
Query: 195 RKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYA 254
M++ T P+E T LA+L A +G V+ + G + + C++D A
Sbjct: 600 EDMISAGIT-PNEQTFLAILFACSHSGLVEHAMHYFEMMQACGISP-KAKHYTCMVDVLA 657
Query: 255 KCGCIFSASKLFEDISVERKNLV-SWTSIISGFAMH---GMGKEAVENFGRMQK 304
+ G + A L + +E K+ SW +++S ++ MG+ A + + K
Sbjct: 658 RAGHLAEAEDLL--LKIESKSEANSWAALLSACNIYRNKEMGERAAKRLQELDK 709
>gi|414885893|tpg|DAA61907.1| TPA: hypothetical protein ZEAMMB73_945776 [Zea mays]
Length = 584
Score = 243 bits (620), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 133/384 (34%), Positives = 215/384 (55%), Gaps = 5/384 (1%)
Query: 73 DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGF-QSHVYVNTALVNMYVSLGFLKDSSKL 131
D Y +CA QLHA +K G SH V LV+ Y G L + ++
Sbjct: 74 DPAAYELAFASCARARDRATAAQLHAHAAKRGLVASHRRVRCRLVHAYAVCGMLPHARRV 133
Query: 132 FDEMPERNLVTWNVMITGLVK-WGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEA 190
FD + ++V WN ++ G + G+ + R F MP R+ VSW ++ +EA
Sbjct: 134 FDGGTDNDMVAWNCLLRGYAQEGGDEDLLRDFFARMPSRDSVSWNTVLSWCVVNGEYDEA 193
Query: 191 LALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLI 250
+A+FR+M+A + +P +T+++V+ AI G + H Y ++ + ++ + LI
Sbjct: 194 IAVFREMLASQECQPDRVTLVSVVSAIAYLGALAHGLWAHAYVFRKCIEVEE-KLSSALI 252
Query: 251 DTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPN 310
+ Y+KCG I A +F+++ +R +L +W ++++GF +G + A+E F RM+ L PN
Sbjct: 253 NMYSKCGFIEGAVYVFDNVGGKR-SLDTWNAMLAGFTANGYSERALELFTRMESTRLMPN 311
Query: 311 RVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTA 370
++TF +VLNACSHGGLVEEG+ +F +M + PDI HYGC++D+ RAG E+AE+
Sbjct: 312 KITFNTVLNACSHGGLVEEGMKYFQRMSRFYGIEPDIAHYGCMVDLFCRAGMFEKAEEII 371
Query: 371 LGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRF 430
+P E D + + LLGAC H N+E+G++V +++E YVL+ NI A G +
Sbjct: 372 QTMPME-PDASMLKALLGACRTHKNLELGKKVGHRLIEAAANDHAGYVLLSNIYALDGNW 430
Query: 431 GDAERLRRVMDERNAFKVPGCSLV 454
G ++R++M +R K PG S V
Sbjct: 431 GGVHKVRKLMLDRGVLKTPGSSSV 454
>gi|147838932|emb|CAN63659.1| hypothetical protein VITISV_008415 [Vitis vinifera]
Length = 760
Score = 243 bits (620), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 138/386 (35%), Positives = 213/386 (55%), Gaps = 9/386 (2%)
Query: 73 DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLF 132
D T S ++ L +G +H + K G S V++AL++MY + S++F
Sbjct: 249 DGTTISSVLPAVGDLEDLVMGILIHGYVIKQGLVSDKCVSSALIDMYGKCSCTSEMSQVF 308
Query: 133 DEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCR----NVVSWTGIIDGYTRMNRSN 188
D+M ++ + N I GL + G++E + LF ++ + NVVSWT +I ++ R
Sbjct: 309 DQMDHMDVGSCNAFIFGLSRNGQVESSLRLFRQLKDQGMELNVVSWTSMIACCSQNGRDM 368
Query: 189 EALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNC 248
EAL LFR+M +P+ +TI +LPA + + H + +RG + D+ V +
Sbjct: 369 EALELFREM-QIAGVKPNSVTIPCLLPACGNIAALMHGKAAHCFSLRRGIST-DVYVGSA 426
Query: 249 LIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLK 308
LID YAKCG I ++ F+ I KNLV W ++I+G+AMHG KEA+E F MQ+ G K
Sbjct: 427 LIDMYAKCGRIQASRICFDGIPT--KNLVCWNAVIAGYAMHGKAKEAMEIFDLMQRSGQK 484
Query: 309 PNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEK 368
P+ ++F VL+ACS GL EEG +F+ M + + ++HY C++ +L RAG+LEQA
Sbjct: 485 PDIISFTCVLSACSQSGLTEEGSYYFNSMSSKYGIEARVEHYACMVTLLSRAGKLEQAYA 544
Query: 369 TALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVG 428
+P D VW LL +C H NV +GE K+ E+E G+Y+L+ NI A G
Sbjct: 545 MIRRMPVN-PDACVWGALLSSCRVHNNVSLGEVAAEKLFELEPSNPGNYILLSNIYASKG 603
Query: 429 RFGDAERLRRVMDERNAFKVPGCSLV 454
+ + R+R +M + K PGCS +
Sbjct: 604 MWNEVNRVRDMMKNKGLRKNPGCSWI 629
Score = 158 bits (399), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 127/449 (28%), Positives = 202/449 (44%), Gaps = 76/449 (16%)
Query: 14 TTQIHSHLLTTNSLLHHSQLFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFD 73
T Q H+H+L T L + + L LL Y+ A L+ + + S S L F
Sbjct: 32 TRQAHAHILKTG-LFNDTHLATKLLSHYANNMCFADATLVLDLVPEPNVFSFSTLIYAFS 90
Query: 74 SF--------TYSFL---------------IRTCATLSHPNLGTQLHAVISKVGFQSHVY 110
F T+S + ++ CA LS Q+H + S GF S +
Sbjct: 91 KFHQFHHALSTFSQMLTRGLMPDNRVLPSAVKACAGLSALKPARQVHGIASVSGFDSDSF 150
Query: 111 VNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCR- 169
V ++LV+MY+ ++D+ ++FD M E ++V+W+ ++ + G ++ A+ LF EM
Sbjct: 151 VQSSLVHMYIKCNQIRDAHRVFDRMFEPDVVSWSALVAAYARQGCVDEAKRLFSEMGDSG 210
Query: 170 ---NVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSC 226
N++SW G+I G+ +EA+ +F M + EP TI +VLPA+ D+
Sbjct: 211 VQPNLISWNGMIAGFNHSGLYSEAVLMFLDMHLRGF-EPDGTTISSVLPAVGDLEDLVMG 269
Query: 227 QLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDIS---------------- 270
LIHGY K+G + D V + LID Y KC C S++F+ +
Sbjct: 270 ILIHGYVIKQGLVS-DKCVSSALIDMYGKCSCTSEMSQVFDQMDHMDVGSCNAFIFGLSR 328
Query: 271 ---VERK--------------NLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVT 313
VE N+VSWTS+I+ + +G EA+E F MQ G+KPN VT
Sbjct: 329 NGQVESSLRLFRQLKDQGMELNVVSWTSMIACCSQNGRDMEALELFREMQIAGVKPNSVT 388
Query: 314 FLSVLNACSHGGLVEEGLNFFDKMVEECEVL-----PDIKHYGCLIDMLGRAGRLEQAEK 368
+L AC + + G C L D+ LIDM + GR++ +
Sbjct: 389 IPCLLPACGNIAALMHG------KAAHCFSLRRGISTDVYVGSALIDMYAKCGRIQASRI 442
Query: 369 TALGIPSEITDVVVWRTLLGACSFHGNVE 397
GIP++ ++V W ++ + HG +
Sbjct: 443 CFDGIPTK--NLVCWNAVIAGYAMHGKAK 469
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 118/267 (44%), Gaps = 35/267 (13%)
Query: 71 LFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSK 130
L DS ++ L +T + + Q HA I K G + ++ T L++ Y + D++
Sbjct: 10 LLDSVQHTILNCLNSTTASLSQTRQAHAHILKTGLFNDTHLATKLLSHYANNMCFADATL 69
Query: 131 LFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEA 190
+ D +PE N+ +++ +I K+ + A S F +M R ++ ++
Sbjct: 70 VLDLVPEPNVFSFSTLIYAFSKFHQFHHALSTFSQMLTRGLMPDNRVL------------ 117
Query: 191 LALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLI 250
PS + A L A+ K + +HG GF + D V + L+
Sbjct: 118 --------------PSAVKACAGLSAL------KPARQVHGIASVSGFDS-DSFVQSSLV 156
Query: 251 DTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPN 310
Y KC I A ++F+ + ++VSW+++++ +A G EA F M G++PN
Sbjct: 157 HMYIKCNQIRDAHRVFDRMF--EPDVVSWSALVAAYARQGCVDEAKRLFSEMGDSGVQPN 214
Query: 311 RVTFLSVLNACSHGGLVEEGLNFFDKM 337
+++ ++ +H GL E + F M
Sbjct: 215 LISWNGMIAGFNHSGLYSEAVLMFLDM 241
>gi|297819366|ref|XP_002877566.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297323404|gb|EFH53825.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 591
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 148/451 (32%), Positives = 231/451 (51%), Gaps = 48/451 (10%)
Query: 7 SQTPNNITTQIHSHLLTTNSLLHHSQLFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHS 66
S P +I N L H NT++ +SL+++P + F L++ L++ +
Sbjct: 56 SLIPRDINYSCRVFSQRLNPTLSHC---NTMIRAFSLSQTPCEGFRLFRALRRNISF--- 109
Query: 67 PLPPLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLK 126
P PL SF I++ L G Q+H I GF S + T L+++Y +
Sbjct: 110 PANPLSSSFALKCCIKSGDLLG----GLQIHGKIFSDGFLSDSLLMTTLMDLYSTCENST 165
Query: 127 DSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNR 186
D+ K+FDE+P+ R+ VSW +I Y R R
Sbjct: 166 DACKVFDEIPQ-------------------------------RDTVSWNVLISCYLRNKR 194
Query: 187 SNEALALFRKMV--ACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIR 244
+ + L LF KM +P +T L L A G + + +H + ++ G + +
Sbjct: 195 TRDVLVLFDKMKNDVDRCVKPDNVTCLLALQACANLGALDFGKQVHDFIDENGLSG-ALN 253
Query: 245 VLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQK 304
+ N L+ Y++CG + A ++F + +N+VSWT++ISG AM+G GKEA+E F M K
Sbjct: 254 LSNTLVSMYSRCGSMDKAYEVFN--RMRERNVVSWTAMISGLAMNGFGKEAIEAFNEMLK 311
Query: 305 VGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVE-ECEVLPDIKHYGCLIDMLGRAGRL 363
G+ P T +L+ACSH GLV+EG+ FFD+M E ++ P++ HYGC++D+LGRA L
Sbjct: 312 FGISPEEQTLTGLLSACSHSGLVDEGMMFFDRMRSGEFKIKPNLHHYGCIVDLLGRARLL 371
Query: 364 EQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNI 423
++A + + D +WRTLLGAC HGNVE+GERV ++E + GDYVL+ N
Sbjct: 372 DKAYSLIKSMEMK-PDSTIWRTLLGACRVHGNVELGERVIAHLIEFKAEEAGDYVLLLNT 430
Query: 424 LAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
+ VG++ LR +M ++ PGCS +
Sbjct: 431 YSSVGKWEKVTELRSLMKKKRIQTNPGCSAI 461
>gi|302768267|ref|XP_002967553.1| hypothetical protein SELMODRAFT_88824 [Selaginella moellendorffii]
gi|300164291|gb|EFJ30900.1| hypothetical protein SELMODRAFT_88824 [Selaginella moellendorffii]
Length = 670
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 130/364 (35%), Positives = 201/364 (55%), Gaps = 4/364 (1%)
Query: 91 NLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGL 150
+ G ++H G +V V TA+++MY G L D+ F+E+ +N VTWN M+T
Sbjct: 182 DQGREIHRYARISGLLPNVVVGTAVISMYGKCGRLDDARAAFEELQWKNSVTWNAMMTNY 241
Query: 151 VKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITI 210
G A LF EM + V W +I Y + R +AL L+R M P + T
Sbjct: 242 KLDGRDREALELFREMHDADSVCWNAMIAAYAQHGRGKQALDLYRSMHDTTDLAPKQGTF 301
Query: 211 LAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDIS 270
+ V+ + +K + IH F A ++ V N L+ Y KCGC+ A +F S
Sbjct: 302 VTVIDVCAELSALKQGRAIHARVRATNFDA-NLLVSNALVHMYGKCGCLDEALDVFH--S 358
Query: 271 VERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEG 330
++ K+ +SW +IIS +A HG +A+ + M G+KP VTF+ +L+ACSHGGLV +G
Sbjct: 359 MKLKDEISWNTIISSYAYHGHSDQALLLYQEMDLQGVKPTEVTFVGLLSACSHGGLVADG 418
Query: 331 LNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGAC 390
L++F +M ++ + P + H+GC+ID+LGR GRL +AE +P + + V W +LLGAC
Sbjct: 419 LDYFYRMQDDHRIKPSVPHFGCIIDLLGRGGRLAEAELVLKSMPIQ-ANAVQWMSLLGAC 477
Query: 391 SFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPG 450
HG+++ G R ++++ G YVL+ NI A GR+ D E++R++M R K PG
Sbjct: 478 KTHGDLKRGVRAADQVVDRVPWTSGGYVLLSNIYAAAGRWKDVEKIRKIMAARGVKKSPG 537
Query: 451 CSLV 454
S +
Sbjct: 538 KSWI 541
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 127/286 (44%), Gaps = 37/286 (12%)
Query: 144 NVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYT 203
N++I K G L +AR LFE MP RNV +WT + ++ +EAL FR+M
Sbjct: 101 NLLIEMYGKCGRLPYARELFESMPSRNVHTWTVAMAAFSHNGCHSEALVFFRRMYQSG-E 159
Query: 204 EPSEITILAVL--PAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFS 261
P +T +L A + + IH Y G ++ V +I Y KCG +
Sbjct: 160 RPDRVTFSVILAAIAQMGAAAIDQGREIHRYARISGLLP-NVVVGTAVISMYGKCGRLDD 218
Query: 262 ASKLFEDIS------------------VERKNL-----------VSWTSIISGFAMHGMG 292
A FE++ +R+ L V W ++I+ +A HG G
Sbjct: 219 ARAAFEELQWKNSVTWNAMMTNYKLDGRDREALELFREMHDADSVCWNAMIAAYAQHGRG 278
Query: 293 KEAVENFGRMQK-VGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYG 351
K+A++ + M L P + TF++V++ C+ +++G + V ++
Sbjct: 279 KQALDLYRSMHDTTDLAPKQGTFVTVIDVCAELSALKQGRAIHAR-VRATNFDANLLVSN 337
Query: 352 CLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVE 397
L+ M G+ G L++A + ++ D + W T++ + ++HG+ +
Sbjct: 338 ALVHMYGKCGCLDEALDVFHSM--KLKDEISWNTIISSYAYHGHSD 381
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/316 (21%), Positives = 129/316 (40%), Gaps = 51/316 (16%)
Query: 31 SQLFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHP 90
S +N ++ Y+ ++A LY+ + H + L P T+ +I CA LS
Sbjct: 262 SVCWNAMIAAYAQHGRGKQALDLYRSM-----HDTTDLAP--KQGTFVTVIDVCAELSAL 314
Query: 91 NLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGL 150
G +HA + F +++ V+ ALV+MY G L ++ +F M ++ ++WN +I+
Sbjct: 315 KQGRAIHARVRATNFDANLLVSNALVHMYGKCGCLDEALDVFHSMKLKDEISWNTIISSY 374
Query: 151 VKWGELEFARSLFEEMPCRNV----VSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPS 206
G + A L++EM + V V++ G++ + + L F +M +PS
Sbjct: 375 AYHGHSDQALLLYQEMDLQGVKPTEVTFVGLLSACSHGGLVADGLDYFYRMQDDHRIKPS 434
Query: 207 EITILAVLPAIWQNGDVKSCQLI----------------HGYGEKRGFTAFDIRVLNCLI 250
++ + + G + +L+ G + G +R + ++
Sbjct: 435 VPHFGCIIDLLGRGGRLAEAELVLKSMPIQANAVQWMSLLGACKTHGDLKRGVRAADQVV 494
Query: 251 DT-------YAKCGCIFSASKLFEDISVERKNLV----------SWTSI-------ISGF 286
D Y I++A+ ++D+ RK + SW I +SG
Sbjct: 495 DRVPWTSGGYVLLSNIYAAAGRWKDVEKIRKIMAARGVKKSPGKSWIEIGDVVHEFVSGD 554
Query: 287 AMHGMGKEAVENFGRM 302
+ H G+E G+M
Sbjct: 555 SSHPQGEEIYVELGKM 570
>gi|357111415|ref|XP_003557509.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Brachypodium distachyon]
Length = 615
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 144/422 (34%), Positives = 229/422 (54%), Gaps = 40/422 (9%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHS-HSPLPPLFDSFTYSFLIRTCATLSHPNL 92
+NTLL Y+ + A ++ +++ + P D++T+ L++ CA
Sbjct: 103 YNTLLRGYARCSAAGGARPPAEEAARVFVRMLEEGVAP--DTYTFVSLLKACAAARAGEE 160
Query: 93 GTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVK 152
G Q H V KVG H YV L+NMY +
Sbjct: 161 GRQAHGVAVKVGAAEHEYVLPTLINMYA-------------------------------E 189
Query: 153 WGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILA 212
G+ AR++F + VVS+ +I R +R EAL LFR+M A + + + +T+++
Sbjct: 190 CGDARAARTMFGRVDGECVVSYNAMITAAVRSSRPGEALVLFREMQA-KGLKLTSVTLIS 248
Query: 213 VLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVE 272
VL A G ++ + IH Y K + ++V LID Y KCG + A +F+ +E
Sbjct: 249 VLSACALLGALELGRWIHEYVRKVQLDSL-VKVNTALIDMYGKCGSLEDAISVFQ--GME 305
Query: 273 RKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLN 332
++ +W+ +I +A H G+EA+ F M+K G+KP+ VTFL VL ACSH GLV EGL
Sbjct: 306 SRDRQAWSVMIVAYANHSYGREAISLFEEMKKQGIKPDDVTFLGVLYACSHSGLVSEGLQ 365
Query: 333 FFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSF 392
+FD M E ++P IKHYGC+ D+L R+G+L++A + +P + T ++WRTLL AC
Sbjct: 366 YFDSM-REFGLVPGIKHYGCVADLLARSGQLDRAYEFIDELPIKPT-AILWRTLLSACGS 423
Query: 393 HGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCS 452
G+ ++G++V +ILE++ +GGDYV+ N+ A GR+ + R+R++M+E+ KVPGCS
Sbjct: 424 RGDADLGKQVFERILELDDSHGGDYVIFSNLCANTGRWEEMNRVRKLMNEKGVVKVPGCS 483
Query: 453 LV 454
+
Sbjct: 484 SI 485
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 93/347 (26%), Positives = 144/347 (41%), Gaps = 52/347 (14%)
Query: 66 SPLPPLFDSFTYSFLIRTCATLSHPNLG-----------TQLHAVISKVGFQSHVYVNTA 114
+P P L + + S L A HP L QLHA K G Q+H T
Sbjct: 9 TPTPFLLPAKSKSPLAAAPAAQQHPLLPYLPQCTTLRALAQLHAAAVKSGLQAHPAFVTR 68
Query: 115 LVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSW 174
L+ + G K +L +AR +F+ +P V W
Sbjct: 69 LLTLCTD--------------------------QGAAKPAQLSYARQVFDRIPGPGDVVW 102
Query: 175 -TGIIDGYTRMNRSN-------EALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSC 226
++ GY R + + EA +F +M+ E P T +++L A +
Sbjct: 103 YNTLLRGYARCSAAGGARPPAEEAARVFVRMLE-EGVAPDTYTFVSLLKACAAARAGEEG 161
Query: 227 QLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGF 286
+ HG K G + VL LI+ YA+CG +A +F V+ + +VS+ ++I+
Sbjct: 162 RQAHGVAVKVGAAEHEY-VLPTLINMYAECGDARAARTMFG--RVDGECVVSYNAMITAA 218
Query: 287 AMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPD 346
EA+ F MQ GLK VT +SVL+AC+ G +E G + + V + ++
Sbjct: 219 VRSSRPGEALVLFREMQAKGLKLTSVTLISVLSACALLGALELG-RWIHEYVRKVQLDSL 277
Query: 347 IKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFH 393
+K LIDM G+ G LE A G+ S D W ++ A + H
Sbjct: 278 VKVNTALIDMYGKCGSLEDAISVFQGMESR--DRQAWSVMIVAYANH 322
>gi|414590987|tpg|DAA41558.1| TPA: hypothetical protein ZEAMMB73_311644 [Zea mays]
Length = 575
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 148/428 (34%), Positives = 227/428 (53%), Gaps = 48/428 (11%)
Query: 69 PPLFD-SFTYSFLIRTCATLSHP-----NLG---TQLHAVISKVGFQS-HVYVNTALVNM 118
P L D SF+ S ++ A LS +LG LHA K GF + ++V TALV
Sbjct: 25 PRLLDNSFSLSLAMQASAALSASVPAMRDLGLGAASLHARALKSGFAAADLFVRTALVEA 84
Query: 119 Y-------------------------------VSLGFLKDSSKLFDEMPERNLVTWNVMI 147
Y V+ G + ++ ++FD M ER++V+WN MI
Sbjct: 85 YAKAGRADLARAAFDEAPRRDVFLCNVMLAAYVTRGEVAEARRVFDGMRERDMVSWNTMI 144
Query: 148 TGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKM-VACEYTEPS 206
G GE++ AR +F M R+ SW+ ++ YT+ RS +AL L+R+M AC P
Sbjct: 145 HGYAVNGEVDLAREVFNGMDDRDAFSWSSMMSAYTKGRRSKDALELWREMRAAC--VNPD 202
Query: 207 EITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLF 266
T+++VL A G + +H + E G D+++ LID YAKCG I ++ ++F
Sbjct: 203 CTTMVSVLSACSDMGALAVGAEVHQFVESNGVE-LDVKLGTALIDMYAKCGDIENSVRVF 261
Query: 267 EDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGL 326
+ V K++++W+S+I G A HG G +A+ F RM GL+PN VTF+ VL +C+H GL
Sbjct: 262 HSMPV--KDVLTWSSMIIGLANHGFGHDALSLFSRMLSEGLQPNEVTFIGVLISCTHLGL 319
Query: 327 VEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTL 386
V +G +F M V P ++HYGC++D+LGR+G +E+A++ +P E D V+WR L
Sbjct: 320 VSDGKKYFSSMSVVHGVTPKVQHYGCMVDLLGRSGHIEEAKQLIRDMPFE-PDAVIWRAL 378
Query: 387 LGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAF 446
LGAC + NVE+ E K+ ++ G YVL+ NI A + +RR +
Sbjct: 379 LGACRIYKNVEVAEEAMAKLRVLDPHADGHYVLLSNIYAQANSWEGVAEMRRTLRRERIQ 438
Query: 447 KVPGCSLV 454
++PG S +
Sbjct: 439 RIPGRSSI 446
>gi|218193589|gb|EEC76016.1| hypothetical protein OsI_13171 [Oryza sativa Indica Group]
Length = 950
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 135/378 (35%), Positives = 218/378 (57%), Gaps = 6/378 (1%)
Query: 77 YSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMP 136
+S ++ CA+L G ++H K+ ++V+V++AL++MY L D+ +F +P
Sbjct: 381 FSSVLGACASLQDLRSGRKIHNQTLKMACSNNVFVSSALIDMYCKCKQLPDAQMIFYSLP 440
Query: 137 ERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRK 196
++N+V WN +I+G ++ A LF++MP RNV SW II GY + + +AL F
Sbjct: 441 QKNIVCWNSLISGYSNNSKMVEAEELFKKMPARNVASWNSIISGYAQNRQFIDALKSFHA 500
Query: 197 MVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKC 256
M+A + P EIT +VL A ++ +++H K G I V L D YAK
Sbjct: 501 MLASGQS-PGEITFSSVLLACASLCSLEMGKMVHAKIIKLGIKE-SIFVGTALSDMYAKS 558
Query: 257 GCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLS 316
G + S+ ++F ++ ++N V+WT++I G A +G +E++ F M G+ PN TFL+
Sbjct: 559 GDLDSSKRVFYEM--PKRNDVAWTAMIQGLAENGFAEESILLFEDMISAGITPNEQTFLA 616
Query: 317 VLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSE 376
+L ACSH GLVE +++F+ M++ C + P KHY C++D+L RAG L +AE L I S+
Sbjct: 617 ILFACSHSGLVEHAMHYFE-MMQACGISPKAKHYTCMVDVLARAGHLAEAEDLLLKIESK 675
Query: 377 ITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERL 436
++ W LL AC+ + N EMGER +++ E+++ YVL+ N+ A G++ DA +
Sbjct: 676 -SEANSWAALLSACNIYRNKEMGERAAKRLQELDKDNTAGYVLLSNMYASCGKWKDAAEM 734
Query: 437 RRVMDERNAFKVPGCSLV 454
R +M N K GCS V
Sbjct: 735 RILMKGINLKKDGGCSWV 752
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 97/399 (24%), Positives = 178/399 (44%), Gaps = 51/399 (12%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNL 92
F ++ + L E P+ A ++ ++ + SP + T +I+ C +L
Sbjct: 212 FFTAMIAGFVLNELPKDALGVF---HEMLSCGVSP-----NEITLVSVIKACIGAGEFDL 263
Query: 93 GTQLHAVISKVGF-QSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLV 151
+ + K ++ V +L+ +Y+ G + ++FDEM R++V+W ++
Sbjct: 264 AMSIVGLAMKSNLLDKNLGVRNSLITLYLRKGDADAARRMFDEMEVRDVVSWTALLDVYA 323
Query: 152 KWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITIL 211
+ G+LE AR + +EMP RN VSW ++ + + + EA++L+ +M+A + P+
Sbjct: 324 ELGDLEGARRVLDEMPERNEVSWGTLVARHEQKGNAKEAVSLYSQMLA-DGCRPNISCFS 382
Query: 212 AVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDI-- 269
+VL A D++S + IH K + ++ V + LID Y KC + A +F +
Sbjct: 383 SVLGACASLQDLRSGRKIHNQTLKMACSN-NVFVSSALIDMYCKCKQLPDAQMIFYSLPQ 441
Query: 270 ---------------------------SVERKNLVSWTSIISGFAMHGMGKEAVENFGRM 302
+ +N+ SW SIISG+A + +A+++F M
Sbjct: 442 KNIVCWNSLISGYSNNSKMVEAEELFKKMPARNVASWNSIISGYAQNRQFIDALKSFHAM 501
Query: 303 QKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHY----GCLIDMLG 358
G P +TF SVL AC+ +E G KMV + IK L DM
Sbjct: 502 LASGQSPGEITFSSVLLACASLCSLEMG-----KMVHAKIIKLGIKESIFVGTALSDMYA 556
Query: 359 RAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVE 397
++G L+ +++ +P + V W ++ + +G E
Sbjct: 557 KSGDLDSSKRVFYEMPKR--NDVAWTAMIQGLAENGFAE 593
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/322 (24%), Positives = 149/322 (46%), Gaps = 35/322 (10%)
Query: 115 LVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSW 174
+V +V G + + +LFD MPER++V++ M+ L+K G + A L+ + P +V +
Sbjct: 154 MVREHVKAGDIVSARRLFDGMPERSVVSYTTMVDALMKRGSVRDAVELYRQCPLCSVPFF 213
Query: 175 TGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGE 234
T +I G+ +AL +F +M++C + P+EIT+++V+ A G+ I G
Sbjct: 214 TAMIAGFVLNELPKDALGVFHEMLSCGVS-PNEITLVSVIKACIGAGEFDLAMSIVGLAM 272
Query: 235 KRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVE---------------------- 272
K ++ V N LI Y + G +A ++F+++ V
Sbjct: 273 KSNLLDKNLGVRNSLITLYLRKGDADAARRMFDEMEVRDVVSWTALLDVYAELGDLEGAR 332
Query: 273 -------RKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGG 325
+N VSW ++++ G KEAV + +M G +PN F SVL AC+
Sbjct: 333 RVLDEMPERNEVSWGTLVARHEQKGNAKEAVSLYSQMLADGCRPNISCFSSVLGACASLQ 392
Query: 326 LVEEGLNFFDKMVE-ECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWR 384
+ G ++ ++ C ++ LIDM + +L A+ +P + ++V W
Sbjct: 393 DLRSGRKIHNQTLKMACS--NNVFVSSALIDMYCKCKQLPDAQMIFYSLPQK--NIVCWN 448
Query: 385 TLLGACSFHGNVEMGERVTRKI 406
+L+ S + + E + +K+
Sbjct: 449 SLISGYSNNSKMVEAEELFKKM 470
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 105/234 (44%), Gaps = 39/234 (16%)
Query: 75 FTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDE 134
T+S ++ CA+L +G +HA I K+G + ++V TAL +MY G L S ++F E
Sbjct: 511 ITFSSVLLACASLCSLEMGKMVHAKIIKLGIKESIFVGTALSDMYAKSGDLDSSKRVFYE 570
Query: 135 MPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALF 194
MP+RN V W MI GL + G E + LFE+M I G T
Sbjct: 571 MPKRNDVAWTAMIQGLAENGFAEESILLFEDM----------ISAGIT------------ 608
Query: 195 RKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYA 254
P+E T LA+L A +G V+ + G + + C++D A
Sbjct: 609 ----------PNEQTFLAILFACSHSGLVEHAMHYFEMMQACGISP-KAKHYTCMVDVLA 657
Query: 255 KCGCIFSASKLFEDISVERKNLV-SWTSIISGFAMH---GMGKEAVENFGRMQK 304
+ G + A L + +E K+ SW +++S ++ MG+ A + + K
Sbjct: 658 RAGHLAEAEDLL--LKIESKSEANSWAALLSACNIYRNKEMGERAAKRLQELDK 709
>gi|62733531|gb|AAX95648.1| Tetratricopeptide repeat, putative [Oryza sativa Japonica Group]
Length = 888
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 135/378 (35%), Positives = 218/378 (57%), Gaps = 6/378 (1%)
Query: 77 YSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMP 136
+S ++ CA+L G ++H K+ ++V+V++AL++MY L D+ +F +P
Sbjct: 381 FSSVLGACASLQDLRSGRKIHNQTLKMACSNNVFVSSALIDMYCKCKQLPDAQMIFYSLP 440
Query: 137 ERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRK 196
++N+V WN +I+G ++ A LF++MP RNV SW II GY + + +AL F
Sbjct: 441 QKNIVCWNSLISGYSNNSKMVEAEELFKKMPARNVASWNSIISGYAQNRQFIDALKSFHA 500
Query: 197 MVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKC 256
M+A + P EIT +VL A ++ +++H K G I V L D YAK
Sbjct: 501 MLASGQS-PGEITFSSVLLACASLCSLEMGKMVHAKIIKLGIKE-SIFVGTALSDMYAKS 558
Query: 257 GCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLS 316
G + S+ ++F ++ ++N V+WT++I G A +G +E++ F M G+ PN TFL+
Sbjct: 559 GDLDSSKRVFYEMP--KRNDVAWTAMIQGLAENGFAEESILLFEDMISAGITPNEQTFLA 616
Query: 317 VLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSE 376
+L ACSH GLVE +++F+ M++ C + P KHY C++D+L RAG L +AE L I S+
Sbjct: 617 ILFACSHSGLVEHAMHYFE-MMQACGISPKAKHYTCMVDVLARAGHLAEAEDLLLKIESK 675
Query: 377 ITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERL 436
++ W LL AC+ + N EMGER +++ E+++ YVL+ N+ A G++ DA +
Sbjct: 676 -SEANSWAALLSACNIYRNKEMGERAAKRLQELDKDNTAGYVLLSNMYASCGKWKDAAEM 734
Query: 437 RRVMDERNAFKVPGCSLV 454
R +M N K GCS V
Sbjct: 735 RILMKGINLKKDGGCSWV 752
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 97/399 (24%), Positives = 178/399 (44%), Gaps = 51/399 (12%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNL 92
F ++ + L E P+ A ++ ++ + SP + T +I+ C +L
Sbjct: 212 FFTAMIAGFVLNELPKDALGVF---HEMLSCGVSP-----NEITLVSVIKACIGAGEFDL 263
Query: 93 GTQLHAVISKVGF-QSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLV 151
+ + K ++ V +L+ +Y+ G + ++FDEM R++V+W ++
Sbjct: 264 AMSIVGLAMKSNLLDKNLGVRNSLITLYLRKGDADAARRMFDEMEVRDVVSWTALLDVYA 323
Query: 152 KWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITIL 211
+ G+LE AR + +EMP RN VSW ++ + + + EA++L+ +M+A + P+
Sbjct: 324 ELGDLEGARRVLDEMPERNEVSWGTLVARHEQKGNAKEAVSLYSQMLA-DGCRPNISCFS 382
Query: 212 AVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDI-- 269
+VL A D++S + IH K + ++ V + LID Y KC + A +F +
Sbjct: 383 SVLGACASLQDLRSGRKIHNQTLKMACSN-NVFVSSALIDMYCKCKQLPDAQMIFYSLPQ 441
Query: 270 ---------------------------SVERKNLVSWTSIISGFAMHGMGKEAVENFGRM 302
+ +N+ SW SIISG+A + +A+++F M
Sbjct: 442 KNIVCWNSLISGYSNNSKMVEAEELFKKMPARNVASWNSIISGYAQNRQFIDALKSFHAM 501
Query: 303 QKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHY----GCLIDMLG 358
G P +TF SVL AC+ +E G KMV + IK L DM
Sbjct: 502 LASGQSPGEITFSSVLLACASLCSLEMG-----KMVHAKIIKLGIKESIFVGTALSDMYA 556
Query: 359 RAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVE 397
++G L+ +++ +P + V W ++ + +G E
Sbjct: 557 KSGDLDSSKRVFYEMPKR--NDVAWTAMIQGLAENGFAE 593
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 80/322 (24%), Positives = 149/322 (46%), Gaps = 35/322 (10%)
Query: 115 LVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSW 174
+V +V G + + +LFD MPER++V++ M+ L+K G + A L+ + P +V +
Sbjct: 154 MVREHVKAGDIVSARRLFDGMPERSVVSYTTMVDALMKRGSVRDAVELYRQCPLCSVPFF 213
Query: 175 TGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGE 234
T +I G+ +AL +F +M++C + P+EIT+++V+ A G+ I G
Sbjct: 214 TAMIAGFVLNELPKDALGVFHEMLSCGVS-PNEITLVSVIKACIGAGEFDLAMSIVGLAM 272
Query: 235 KRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVE---------------------- 272
K ++ V N LI Y + G +A ++F+++ V
Sbjct: 273 KSNLLDKNLGVRNSLITLYLRKGDADAARRMFDEMEVRDVVSWTALLDVYAELGDLEGAR 332
Query: 273 -------RKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGG 325
+N VSW ++++ G KEAV + +M G +PN F SVL AC+
Sbjct: 333 RVLDEMPERNEVSWGTLVARHEQKGNAKEAVSLYSQMLADGCRPNISCFSSVLGACASLQ 392
Query: 326 LVEEGLNFFDKMVE-ECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWR 384
+ G ++ ++ C ++ LIDM + +L A+ +P + ++V W
Sbjct: 393 DLRSGRKIHNQTLKMACS--NNVFVSSALIDMYCKCKQLPDAQMIFYSLPQK--NIVCWN 448
Query: 385 TLLGACSFHGNVEMGERVTRKI 406
+L+ S + + E + +K+
Sbjct: 449 SLISGYSNNSKMVEAEELFKKM 470
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 105/234 (44%), Gaps = 39/234 (16%)
Query: 75 FTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDE 134
T+S ++ CA+L +G +HA I K+G + ++V TAL +MY G L S ++F E
Sbjct: 511 ITFSSVLLACASLCSLEMGKMVHAKIIKLGIKESIFVGTALSDMYAKSGDLDSSKRVFYE 570
Query: 135 MPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALF 194
MP+RN V W MI GL + G E + LFE+M I G T
Sbjct: 571 MPKRNDVAWTAMIQGLAENGFAEESILLFEDM----------ISAGIT------------ 608
Query: 195 RKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYA 254
P+E T LA+L A +G V+ + G + + C++D A
Sbjct: 609 ----------PNEQTFLAILFACSHSGLVEHAMHYFEMMQACGISP-KAKHYTCMVDVLA 657
Query: 255 KCGCIFSASKLFEDISVERKNLV-SWTSIISGFAMH---GMGKEAVENFGRMQK 304
+ G + A L + +E K+ SW +++S ++ MG+ A + + K
Sbjct: 658 RAGHLAEAEDLL--LKIESKSEANSWAALLSACNIYRNKEMGERAAKRLQELDK 709
>gi|449465002|ref|XP_004150218.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
gi|449500809|ref|XP_004161200.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
Length = 926
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 141/442 (31%), Positives = 232/442 (52%), Gaps = 22/442 (4%)
Query: 17 IHSHLLTTNSLLHHSQLFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFT 76
+HS+ + +L + NTLL YS A +++++ + S
Sbjct: 374 LHSYSIKAATLDREVRFNNTLLDMYSKCGDLNSAIRVFERMDEKTVVS------------ 421
Query: 77 YSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMP 136
++ +I + +L + G VY T+++N G LK + D +
Sbjct: 422 WTSMITGYVREGLSDGAIKLFDEMKSRGVVPDVYAVTSILNACAINGNLKSGKIVHDYIR 481
Query: 137 ERNLVT----WNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALA 192
E NL T N + K G ++ A +F M ++V+SW +I GYT+ + NEAL
Sbjct: 482 ENNLETNSFVSNALTDMYAKCGSMKDAHDVFSHMKKKDVISWNTMIGGYTKNSLPNEALT 541
Query: 193 LFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDT 252
LF +M ++P T+ +LPA + + IHGY + G++ D V N ++D
Sbjct: 542 LFAEMQ--RESKPDGTTVACILPACASLAALDKGREIHGYALRNGYSE-DKYVTNAVVDM 598
Query: 253 YAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRV 312
Y KCG + A LF+ I K+LVSWT +I+G+ MHG G EA+ F +M+ G++P+ V
Sbjct: 599 YVKCGLLVLARSLFDMIP--NKDLVSWTVMIAGYGMHGYGSEAINTFNQMRMTGIEPDEV 656
Query: 313 TFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALG 372
+F+S+L ACSH GL++EG F+ M +EC++ P+++HY C++D+L R G L +A K
Sbjct: 657 SFISILYACSHSGLLDEGWKIFNIMKKECQIEPNLEHYACMVDLLARTGNLVKAHKFIKA 716
Query: 373 IPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGD 432
+P + D +W LL C H +V++ E+V +I E+E G YVL+ NI A ++ +
Sbjct: 717 MPIK-PDATIWGALLCGCRIHHDVKLAEKVAERIFELEPENTGYYVLLANIYAEAEKWEE 775
Query: 433 AERLRRVMDERNAFKVPGCSLV 454
++LR+ + +R K PGCS +
Sbjct: 776 VQKLRKKIGQRGLKKNPGCSWI 797
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 92/357 (25%), Positives = 174/357 (48%), Gaps = 45/357 (12%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNL 92
L+N ++ YS + + ++ L+KQ+ ++ + P +S+T+S +++ A ++
Sbjct: 218 LWNLMISEYSGSGNYGESINLFKQMLEL------GIKP--NSYTFSSILKCFAAVARVEE 269
Query: 93 GTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVK 152
G Q+H +I K+GF S+ V +L++ Y ++ + KLFDE+ +R++++WN MI+G VK
Sbjct: 270 GRQVHGLICKLGFNSYNTVVNSLISFYFVGRKVRCAQKLFDELTDRDVISWNSMISGYVK 329
Query: 153 WGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILA 212
G + + +F KM+ + T++
Sbjct: 330 NG-------------------------------LDDRGIEIFIKMLVFG-VDIDLATMVN 357
Query: 213 VLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVE 272
V A G + +++H Y K ++R N L+D Y+KCG + SA ++FE ++
Sbjct: 358 VFVACANIGTLLLGKVLHSYSIKAATLDREVRFNNTLLDMYSKCGDLNSAIRVFE--RMD 415
Query: 273 RKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLN 332
K +VSWTS+I+G+ G+ A++ F M+ G+ P+ S+LNAC+ G ++ G
Sbjct: 416 EKTVVSWTSMITGYVREGLSDGAIKLFDEMKSRGVVPDVYAVTSILNACAINGNLKSGKI 475
Query: 333 FFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGA 389
D + E + + L DM + G ++ A + + DV+ W T++G
Sbjct: 476 VHD-YIRENNLETNSFVSNALTDMYAKCGSMKDAHDVFSHMKKK--DVISWNTMIGG 529
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 83/313 (26%), Positives = 136/313 (43%), Gaps = 40/313 (12%)
Query: 83 TCATLSHPNLGTQLHAV-ISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLV 141
CA + LG LH+ I V N L++MY G L + ++F+ M E+ +V
Sbjct: 361 ACANIGTLLLGKVLHSYSIKAATLDREVRFNNTLLDMYSKCGDLNSAIRVFERMDEKTVV 420
Query: 142 TWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACE 201
+W MITG V+ G + A LF+EM R VV
Sbjct: 421 SWTSMITGYVREGLSDGAIKLFDEMKSRGVV----------------------------- 451
Query: 202 YTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFS 261
P + ++L A NG++KS +++H Y + V N L D YAKCG +
Sbjct: 452 ---PDVYAVTSILNACAINGNLKSGKIVHDYIRENNLETNSF-VSNALTDMYAKCGSMKD 507
Query: 262 ASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNAC 321
A +F + ++K+++SW ++I G+ + + EA+ F MQ+ KP+ T +L AC
Sbjct: 508 AHDVFSHM--KKKDVISWNTMIGGYTKNSLPNEALTLFAEMQRES-KPDGTTVACILPAC 564
Query: 322 SHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVV 381
+ +++G + D ++DM + G L A IP++ D+V
Sbjct: 565 ASLAALDKGREIHGYALRN-GYSEDKYVTNAVVDMYVKCGLLVLARSLFDMIPNK--DLV 621
Query: 382 VWRTLLGACSFHG 394
W ++ HG
Sbjct: 622 SWTVMIAGYGMHG 634
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 83/370 (22%), Positives = 154/370 (41%), Gaps = 68/370 (18%)
Query: 72 FDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKL 131
FD Y +++ CA G ++ ++I G + LV MYV
Sbjct: 148 FDLGAYCSILQLCAERKSIRDGRRVRSIIESSGVMIDGILGVKLVFMYV----------- 196
Query: 132 FDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEAL 191
K G+L+ R +F+++ + W +I Y+ E++
Sbjct: 197 --------------------KCGDLKEGRMVFDKLSESKIFLWNLMISEYSGSGNYGESI 236
Query: 192 ALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLID 251
LF++M+ +P+ T ++L V+ + +HG K GF +++ V+N LI
Sbjct: 237 NLFKQMLELG-IKPNSYTFSSILKCFAAVARVEEGRQVHGLICKLGFNSYNT-VVNSLIS 294
Query: 252 TYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNR 311
Y + A KLF++++ ++++SW S+ISG+ +G+ +E F +M G+ +
Sbjct: 295 FYFVGRKVRCAQKLFDELT--DRDVISWNSMISGYVKNGLDDRGIEIFIKMLVFGVDIDL 352
Query: 312 VTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQA----- 366
T ++V AC++ G + G ++ + +++ L+DM + G L A
Sbjct: 353 ATMVNVFVACANIGTLLLGKVLHSYSIKAATLDREVRFNNTLLDMYSKCGDLNSAIRVFE 412
Query: 367 ---EKTALGIPSEIT-------------------------DVVVWRTLLGACSFHGNVEM 398
EKT + S IT DV ++L AC+ +GN++
Sbjct: 413 RMDEKTVVSWTSMITGYVREGLSDGAIKLFDEMKSRGVVPDVYAVTSILNACAINGNLKS 472
Query: 399 GERVTRKILE 408
G+ V I E
Sbjct: 473 GKIVHDYIRE 482
>gi|356557795|ref|XP_003547196.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g21065-like [Glycine max]
Length = 661
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 147/445 (33%), Positives = 243/445 (54%), Gaps = 54/445 (12%)
Query: 12 NITTQIHSHLLTTNSLLHHSQLF--NTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLP 69
N+ T + S+ +++H+ +F NT+ Y+ +++P A Y+Q+ S +
Sbjct: 74 NVFTWVLSYAYNVFTMIHNPNVFTWNTMTRGYAESDNPSPALRFYRQMIV------SRIE 127
Query: 70 PLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSS 129
P D+ TY FL++ + + G +H+V + GF+S V+V +L+++Y + G
Sbjct: 128 P--DTHTYPFLLKAISKSLNVREGEAIHSVTIRNGFESLVFVQNSLLHIYAACG------ 179
Query: 130 KLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNE 189
+ E A ++FE M R++V+ +I+G+ R +E
Sbjct: 180 -------------------------DTESAHNVFELMRDRDLVAXISVINGFALNGRPSE 214
Query: 190 ALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCL 249
AL LFR+M A E EP T++++L A + G ++ + +H Y K G + V N L
Sbjct: 215 ALTLFREMSA-EGVEPDGFTVVSLLSASAELGALELGRRVHVYLLKVGLRE-NSHVTNSL 272
Query: 250 IDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKP 309
+D YAKC I+ +N VSWTS+I G A++G G+EA+E F M+ GL P
Sbjct: 273 LDLYAKCDAIWEX----------ERNAVSWTSLIVGLAVNGFGEEALELFREMEGQGLVP 322
Query: 310 NRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKT 369
+ +TF+ VL ACSH G+++EG ++F +M EE ++P I+HYGC++D+L RAG ++QA +
Sbjct: 323 SEITFVGVLYACSHCGMLDEGFDYFRRMKEEFGIMPRIEHYGCMVDLLSRAGLVKQAYEY 382
Query: 370 ALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGR 429
+P + + V WRTLLGAC+ HG++ +GE +L++E + GDYVL+ N+ R
Sbjct: 383 IQNMPVQ-PNAVTWRTLLGACTIHGHLGLGETARSHLLKLEPKHSGDYVLLSNLYTSECR 441
Query: 430 FGDAERLRRVMDERNAFKVPGCSLV 454
+ D + +RR M + K G SLV
Sbjct: 442 WADVQLIRRSMLKDGVKKTSGYSLV 466
>gi|219363695|ref|NP_001136685.1| uncharacterized protein LOC100216817 [Zea mays]
gi|194696634|gb|ACF82401.1| unknown [Zea mays]
Length = 615
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 147/443 (33%), Positives = 221/443 (49%), Gaps = 67/443 (15%)
Query: 74 SFTYSFLIRTCATLS-HPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSK-- 130
+FTYSFLI+ A P G H V K+G +V AL++ Y L D+ K
Sbjct: 130 TFTYSFLIKALAAAGLTPVRGAHAHVV--KLGSAEDTFVGNALIDAYSKNQGLSDAKKVF 187
Query: 131 -----------------------------LFDEMPERNLVTWNVMITGLVKWGELEFARS 161
+FDEMPE++ V+WN M+ G K GE E A
Sbjct: 188 DEMTTRDVVSWNTAMAAMVRQGEVDAARSMFDEMPEKDTVSWNTMLDGYAKAGEAEKAFE 247
Query: 162 LFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKM------------VACE-------- 201
LF+ MP RNVVSW+ ++ Y + A +F KM AC
Sbjct: 248 LFQRMPGRNVVSWSTVVSAYCKKGDMEMARVIFDKMPAKNLVTWTIMVSACAQKGLVEEA 307
Query: 202 ---YTEPSE-------ITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLID 251
+TE + I ++++L A ++G + + IH + +R + + V N L+D
Sbjct: 308 GRLFTEMMDAAIELDVIAVVSILAACAESGSLALGKRIHRHVRQRKLSRSTL-VCNALMD 366
Query: 252 TYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNR 311
+ KCGC+ A +F D + K+LVSW II GFAMHG G++A+E F +M++ G P+
Sbjct: 367 MFCKCGCVNRADYIF-DTEIVEKDLVSWNIIIGGFAMHGPGEKALELFAQMKQQGFHPDA 425
Query: 312 VTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTAL 371
VT ++VL+AC+H GLVEEG FF M + + P I+HYGC++D+LGR G +++A
Sbjct: 426 VTLINVLSACTHMGLVEEGRRFFANMETDYGIKPQIEHYGCMVDLLGRGGLIKEAVDMIK 485
Query: 372 GIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFG 431
+P E + V+W +LL AC H NVE E ++ ++ G+Y ++ NI A G++
Sbjct: 486 RMPWEPNE-VIWGSLLSACRLHKNVEYAELAVNELSNLQPSSAGNYAVLSNIYAEAGKWS 544
Query: 432 DAERLRRVMDERNAFKVPGCSLV 454
D + R M + K G S +
Sbjct: 545 DMAKARVQMKGTGSQKTAGSSWI 567
>gi|220061995|gb|ACL79585.1| pentatricopeptide repeat protein [Oryza sativa Japonica Group]
Length = 589
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 140/383 (36%), Positives = 212/383 (55%), Gaps = 33/383 (8%)
Query: 70 PLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSS 129
P D+ + SF ++ A S + QLHA++ ++G + V + T L++ Y G L +
Sbjct: 109 PRPDALSLSFALKASARCSDAHTTVQLHALVLRLGVAADVRLLTTLLDSYAKCGDLASAR 168
Query: 130 KLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNE 189
K+FDEM R++ TWN ++ GL + E A +LF R+ S
Sbjct: 169 KVFDEMTVRDVATWNSLLAGLAQGTEPNLALALFH------------------RLANS-- 208
Query: 190 ALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCL 249
F+++ + E EP+E+TI+AVL A Q G +K +H + +K G ++RV N L
Sbjct: 209 ----FQELPSRE--EPNEVTIVAVLSACAQIGLLKDGMYVHEFAKKFGLDR-NVRVCNSL 261
Query: 250 IDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKP 309
ID Y+KCG + A +F I E + LVS+ + I +MHG G +A+ F M ++P
Sbjct: 262 IDMYSKCGSLSRALDVFHSIKPEDRTLVSYNAAIQAHSMHGHGGDALRLFDEM-PTRIEP 320
Query: 310 NRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKT 369
+ VT+L+VL C+H GLV++GL F+ M V P++KHYG ++D+LGRAGRL +A T
Sbjct: 321 DGVTYLAVLCGCNHSGLVDDGLRVFNSM----RVAPNMKHYGTIVDLLGRAGRLTEAYDT 376
Query: 370 ALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGR 429
+ +P D+V+W+TLLGA HG VE+ E K+ E+ GDYVL+ N+ A R
Sbjct: 377 VISMPFP-ADIVLWQTLLGAAKMHGVVELAELAANKLAELGSNVDGDYVLLSNVYASKAR 435
Query: 430 FGDAERLRRVMDERNAFKVPGCS 452
+ D R+R M + KVPG S
Sbjct: 436 WMDVGRVRDTMRSNDVRKVPGFS 458
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 73/169 (43%), Gaps = 7/169 (4%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+N+LL + P A L+ +L + S P + T ++ CA + G
Sbjct: 182 WNSLLAGLAQGTEPNLALALFHRLANSFQELPSREEP--NEVTIVAVLSACAQIGLLKDG 239
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEM-PE-RNLVTWNVMITGLV 151
+H K G +V V +L++MY G L + +F + PE R LV++N I
Sbjct: 240 MYVHEFAKKFGLDRNVRVCNSLIDMYSKCGSLSRALDVFHSIKPEDRTLVSYNAAIQAHS 299
Query: 152 KWGELEFARSLFEEMPCR---NVVSWTGIIDGYTRMNRSNEALALFRKM 197
G A LF+EMP R + V++ ++ G ++ L +F M
Sbjct: 300 MHGHGGDALRLFDEMPTRIEPDGVTYLAVLCGCNHSGLVDDGLRVFNSM 348
>gi|21741755|emb|CAD39781.1| OSJNBa0060B20.9 [Oryza sativa Japonica Group]
Length = 897
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 128/322 (39%), Positives = 195/322 (60%), Gaps = 7/322 (2%)
Query: 137 ERNLVTWNVMITGLVKWGELEFARSLFEEMPC--RNVVSWTGIIDGYTRMNRSNEALALF 194
+ +L+ +N +I K + ARS+F+++P RNVV+WT +I G+ + SN+AL LF
Sbjct: 450 DEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLF 509
Query: 195 RKMVACEY-TEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRG-FTAFDIRVLNCLIDT 252
+M++ Y P+ TI +L A ++ + IH Y + + + V NCLID
Sbjct: 510 VEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDM 569
Query: 253 YAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRV 312
Y+KCG + +A +F+ +S +K+ +SWTS+++G+ MHG G EA++ F +M+K G P+ +
Sbjct: 570 YSKCGDVDTARHVFDSMS--QKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDI 627
Query: 313 TFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALG 372
TFL VL ACSH G+V++GL++FD M + + P +HY C ID+L R+GRL++A +T
Sbjct: 628 TFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYACAIDLLARSGRLDKAWRTVKD 687
Query: 373 IPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGD 432
+P E T VVW LL AC H NVE+ E K++EM G Y L+ NI A GR+ D
Sbjct: 688 MPMEPT-AVVWVALLSACRVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATAGRWKD 746
Query: 433 AERLRRVMDERNAFKVPGCSLV 454
R+R +M + K PGCS V
Sbjct: 747 VARIRHLMKKSGIKKRPGCSWV 768
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 96/331 (29%), Positives = 160/331 (48%), Gaps = 19/331 (5%)
Query: 80 LIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERN 139
++ C +L ++H + G V+V AL++ Y G ++++ K+F+ M ++
Sbjct: 278 ILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFKD 337
Query: 140 LVTWNVMITGLVKWGELEFARSLFEEMPCRN----VVSWTGIIDGYTRMNRSNEALALFR 195
+V+WN M+ G + G E A LF+ M N VV+WT +I GY++ S+EAL LFR
Sbjct: 338 VVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNLFR 397
Query: 196 KMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKR---------GFTAFDIRVL 246
+M+ + P+ +TI++VL A G IH Y K G D+ V
Sbjct: 398 QMIF-SGSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVY 456
Query: 247 NCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRM--QK 304
N LID Y+KC +A +F+DI +E +N+V+WT +I G A +G +A++ F M +
Sbjct: 457 NALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEP 516
Query: 305 VGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYG-CLIDMLGRAGRL 363
G+ PN T +L AC+H + G ++ CLIDM + G +
Sbjct: 517 YGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYSKCGDV 576
Query: 364 EQAEKTALGIPSEITDVVVWRTLLGACSFHG 394
+ A + + + W +++ HG
Sbjct: 577 DTARHVFDSMSQK--SAISWTSMMTGYGMHG 605
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 112/437 (25%), Positives = 190/437 (43%), Gaps = 90/437 (20%)
Query: 73 DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLF 132
D FT +++ C L G+ H +I GF+S+V++ ALV MY G L+++S +F
Sbjct: 161 DHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIF 220
Query: 133 DEMPER---NLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNE 189
DE+ +R ++++WN +++ VK +WT
Sbjct: 221 DEITQRGIDDVISWNSIVSAHVKSSN-----------------AWT-------------- 249
Query: 190 ALALFRKMVACEYTEPSE-----ITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIR 244
AL LF KM + +P+ I+I+ +LPA V + +HG + G T D+
Sbjct: 250 ALDLFSKMTLIVHEKPTNERSDIISIVNILPACGSLKAVPQTKEVHGNAIRNG-TFPDVF 308
Query: 245 VLNCLIDTYAKCGCIFSASKL-----FEDI------------------------SVERKN 275
V N LID YAKCG + +A K+ F+D+ ++ ++N
Sbjct: 309 VGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKEN 368
Query: 276 L----VSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGL 331
+ V+WT++I+G++ G EA+ F +M G PN VT +SVL+AC+ G +G
Sbjct: 369 IPLDVVTWTAVIAGYSQRGCSHEALNLFRQMIFSGSLPNCVTIISVLSACASLGAFSQGT 428
Query: 332 NFFDKMVEECEVL---------PDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVV 382
++ C + D+ Y LIDM + + A IP E +VV
Sbjct: 429 EIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVT 488
Query: 383 WRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAG--------VGRFGDAE 434
W ++G + +G+ ++ +++ G + + IL +G+ A
Sbjct: 489 WTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAY 548
Query: 435 RLRRVMDERNAFKVPGC 451
LR E +A+ V C
Sbjct: 549 VLRHHRYESSAYFVANC 565
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 62/274 (22%), Positives = 117/274 (42%), Gaps = 16/274 (5%)
Query: 135 MPERNLVTWNVMITGLVK----WGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEA 190
+P ++ + TG+V G ++A + E + V W +I + + R + A
Sbjct: 87 LPSEPFISPRSLGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSA 146
Query: 191 LALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLI 250
+ + +M+ T P T+ VL A + + HG GF + ++ + N L+
Sbjct: 147 INVSCRMLRAG-TRPDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFES-NVFICNALV 204
Query: 251 DTYAKCGCIFSASKLFEDISVER-KNLVSWTSIISGFAMHGMGKEAVENFGRM------Q 303
Y++CG + AS +F++I+ +++SW SI+S A++ F +M +
Sbjct: 205 AMYSRCGSLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEK 264
Query: 304 KVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRL 363
+ + ++ +++L AC V + + PD+ LID + G +
Sbjct: 265 PTNERSDIISIVNILPACGSLKAVPQTKEVHGNAIRN-GTFPDVFVGNALIDAYAKCGLM 323
Query: 364 EQAEKTALGIPSEITDVVVWRTLLGACSFHGNVE 397
E A K + E DVV W ++ S GN E
Sbjct: 324 ENAVKVFNMM--EFKDVVSWNAMVAGYSQSGNFE 355
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 96/230 (41%), Gaps = 57/230 (24%)
Query: 73 DSFTYSFLIRTCATLSHPNLGTQLHA-VISKVGFQSHVY-VNTALVNMYVSLGFLKDSSK 130
+++T S ++ CA L+ +G Q+HA V+ ++S Y V L++MY G + +
Sbjct: 522 NAYTISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYSKCGDVDTARH 581
Query: 131 LFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEA 190
+FD M +++ ++W M+T GY R +EA
Sbjct: 582 VFDSMSQKSAISWTSMMT-------------------------------GYGMHGRGSEA 610
Query: 191 LALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLN--- 247
L +F KM + P +IT L VL A G V +G + FD +
Sbjct: 611 LDIFDKMRKAGFV-PDDITFLVVLYACSHCGMV-----------DQGLSYFDSMSADYGL 658
Query: 248 --------CLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMH 289
C ID A+ G + A + +D+ +E +V W +++S +H
Sbjct: 659 TPRAEHYACAIDLLARSGRLDKAWRTVKDMPMEPTAVV-WVALLSACRVH 707
>gi|242059647|ref|XP_002458969.1| hypothetical protein SORBIDRAFT_03g043550 [Sorghum bicolor]
gi|241930944|gb|EES04089.1| hypothetical protein SORBIDRAFT_03g043550 [Sorghum bicolor]
Length = 530
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 142/402 (35%), Positives = 236/402 (58%), Gaps = 12/402 (2%)
Query: 53 LYKQLQQIYTHSHSPLP--PLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVY 110
LY + ++ ++ +H+ L P D+ +++ L+ CA + ++ ++ + + ++ V
Sbjct: 127 LYAKCEE-FSAAHAALADIPAPDAVSFNSLL--CAHARNASV-RPAESLFAAMRSRTQVS 182
Query: 111 VNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRN 170
N A+V +YVS G L + ++FDEMP R+ +W+V+I G K G ++ AR LF++MP +N
Sbjct: 183 WN-AMVVLYVSAGDLVSARRVFDEMPTRDTASWSVLIAGYCKGGLVQNARELFDKMPSKN 241
Query: 171 VVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIH 230
+V+ T +I+GY + + ALALFR + A EP T++ V+ A+ Q G + +
Sbjct: 242 LVARTAMINGYAQTGQPKAALALFRDLEAAG-IEPDGATMVGVISAVSQIGSTELAGWVG 300
Query: 231 GYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHG 290
Y +++ +++VL L+D +AKCG I A F +I + + +T++ISG A HG
Sbjct: 301 AYVDRKKIER-NVKVLTALVDMHAKCGNIEQALSAFREIP--QPDAYPYTALISGLATHG 357
Query: 291 MGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHY 350
K A+ F RMQ +KP+ +TF+ VL ACSH GLV++GL +++ MV + ++ HY
Sbjct: 358 HEKLALSVFERMQVQAVKPDPITFVGVLTACSHTGLVDKGLEYWEAMVRDYGIVRRADHY 417
Query: 351 GCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEME 410
C+IDMLGRAGR+E+A + +P + LL AC + NVE+ E V K+ E+E
Sbjct: 418 ACVIDMLGRAGRIEEAFEMVQTMPMGPHPGALG-ALLSACKTYENVEIAEIVANKLFELE 476
Query: 411 RGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCS 452
G+Y+L+ NI AG + +AER+R +M + FK PG +
Sbjct: 477 PWNTGNYILLSNIYAGKELWEEAERVRSLMRTKLPFKNPGST 518
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/168 (20%), Positives = 74/168 (44%), Gaps = 12/168 (7%)
Query: 35 NTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLGT 94
+++ Y+ P+ A L++ L+ D T +I + + L
Sbjct: 246 TAMINGYAQTGQPKAALALFRDLEAAGIEP--------DGATMVGVISAVSQIGSTELAG 297
Query: 95 QLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWG 154
+ A + + + +V V TALV+M+ G ++ + F E+P+ + + +I+GL G
Sbjct: 298 WVGAYVDRKKIERNVKVLTALVDMHAKCGNIEQALSAFREIPQPDAYPYTALISGLATHG 357
Query: 155 ELEFARSLFEEMPCRNV----VSWTGIIDGYTRMNRSNEALALFRKMV 198
+ A S+FE M + V +++ G++ + ++ L + MV
Sbjct: 358 HEKLALSVFERMQVQAVKPDPITFVGVLTACSHTGLVDKGLEYWEAMV 405
>gi|357142117|ref|XP_003572465.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Brachypodium distachyon]
Length = 613
Score = 242 bits (618), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 149/430 (34%), Positives = 239/430 (55%), Gaps = 22/430 (5%)
Query: 27 LLHHSQLFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCAT 86
L+ +QL+NT++ Y A + A L++ + + TH+ L + ++
Sbjct: 166 LVKDAQLYNTMIAAYMEAGEVELAEELFEVMPERNTHT---LMEMVGGYS---------- 212
Query: 87 LSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVM 146
+ ++ + H G + V TA+++ + G + D+ +FD M +R++ TWNVM
Sbjct: 213 -ARGDMDSAKHVFEMANGVVNMVLC-TAMISGFAKTGSVDDARSVFDGMRQRDVATWNVM 270
Query: 147 ITGL-VKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEP 205
I + K G +E AR +F+ MP RNVV WT +I GYT++ + +A+ LFR M +
Sbjct: 271 IGVMYAKCGLVEDARKVFDAMPERNVVCWTSMISGYTQVGKFKQAVKLFRDM-QISGVKA 329
Query: 206 SEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKL 265
+ TI V+ + Q G + + +H Y + G I V N LID Y+KCG I A ++
Sbjct: 330 DDATIATVVSSCGQMGALDLGRYVHAYCDVHGLGK-GISVKNSLIDMYSKCGDIKKAHEI 388
Query: 266 FEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVG-LKPNRVTFLSVLNACSHG 324
F + V+R + SWT +I GFA++G+ EA++ F +M++ G + PN +TFL VL +CSHG
Sbjct: 389 FRGL-VKRDDF-SWTVMIMGFAVNGLSGEALDLFAQMEEEGEVMPNEITFLGVLTSCSHG 446
Query: 325 GLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWR 384
GLVE+G + F +M + + P I+HYGC++D+LGRA L +AE+ +P DV +WR
Sbjct: 447 GLVEQGYHHFHRMSKVYGIAPRIEHYGCMVDLLGRAKLLAEAEQFIEEMPI-APDVAIWR 505
Query: 385 TLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERN 444
+LL AC G V + E V ++ E+E G VL+ N+ A R+ D ++R M
Sbjct: 506 SLLFACRARGEVGLAEYVAERVEELEPSRCGGNVLLSNVYATTSRWVDVNKVRTGMGRSR 565
Query: 445 AFKVPGCSLV 454
K PGCS++
Sbjct: 566 VSKRPGCSVI 575
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 94/336 (27%), Positives = 159/336 (47%), Gaps = 33/336 (9%)
Query: 46 SPQKAFLLYKQLQQIYTHSHSP-LPPLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVG 104
+ + A LY Q+ H P + PL +FT S +++ A G Q+H + K G
Sbjct: 82 AARDAVALYAQM-----HRGCPGVRPL--TFTVSSVLKAAARREMLREGEQVHVHVFKNG 134
Query: 105 FQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFE 164
FQ+ + T LV++Y G L D+ ++FD + ++ +N MI ++ GE+E A LFE
Sbjct: 135 FQTDERIATTLVDLYARCGRLDDARRVFDRLLVKDAQLYNTMIAAYMEAGEVELAEELFE 194
Query: 165 EMPCRNVVSWTGIIDGYTRMNRSNEALALFR------KMVACEYTEPSEITILAVLPAIW 218
MP RN + ++ GY+ + A +F MV C A++
Sbjct: 195 VMPERNTHTLMEMVGGYSARGDMDSAKHVFEMANGVVNMVLC----------TAMISGFA 244
Query: 219 QNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDT-YAKCGCIFSASKLFEDISVERKNLV 277
+ G V + + G D+ N +I YAKCG + A K+F+ ++ +N+V
Sbjct: 245 KTGSVDDARSVFD-----GMRQRDVATWNVMIGVMYAKCGLVEDARKVFD--AMPERNVV 297
Query: 278 SWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKM 337
WTS+ISG+ G K+AV+ F MQ G+K + T +V+++C G ++ G +
Sbjct: 298 CWTSMISGYTQVGKFKQAVKLFRDMQISGVKADDATIATVVSSCGQMGALDLG-RYVHAY 356
Query: 338 VEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGI 373
+ + I LIDM + G +++A + G+
Sbjct: 357 CDVHGLGKGISVKNSLIDMYSKCGDIKKAHEIFRGL 392
>gi|242059435|ref|XP_002458863.1| hypothetical protein SORBIDRAFT_03g041710 [Sorghum bicolor]
gi|241930838|gb|EES03983.1| hypothetical protein SORBIDRAFT_03g041710 [Sorghum bicolor]
Length = 544
Score = 242 bits (618), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 131/344 (38%), Positives = 200/344 (58%), Gaps = 10/344 (2%)
Query: 113 TALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVV 172
T LV+ YVS G ++ + ++FD MP RN W+ M+TG K G E A+++F +P RN+V
Sbjct: 190 TVLVHGYVSAGDMEAAREVFDRMPARNAFVWSSMVTGYFKAGNAEEAQAVFHRIPTRNLV 249
Query: 173 SWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGY 232
+W +I GY ++ S +AL F M+ E +P E T+ ++L A Q G ++ + +H +
Sbjct: 250 NWNALIAGYAQIGCSEKALEAFDSMLQ-ERVKPDEFTMASLLSACAQLGSLEQGKKVHDF 308
Query: 233 GEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMG 292
+ VLN LID YAKCG + A +F+ + KN W ++IS A HG
Sbjct: 309 INREHIRKNHF-VLNGLIDMYAKCGDLVYARYIFD--GMRWKNTECWNTMISALASHGRS 365
Query: 293 KEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGC 352
EA+ F +M+ G PN +T L+VL AC+HGG V+EGL F+K+ + V ++HYGC
Sbjct: 366 DEALHLFFQMEHSGQTPNTITVLAVLGACTHGGFVDEGLRIFNKL-DAYGVEAGVEHYGC 424
Query: 353 LIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERG 412
L+D+LGRAG+L++A + +P E + V+W +LLGAC HG+ EM VT +I +
Sbjct: 425 LVDLLGRAGKLKEAYEIVKNMPEEPNE-VIWGSLLGACRVHGDAEMSRLVTDEIHRLHSV 483
Query: 413 YG----GDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCS 452
+ +Y+++ NI+A R+ AE++RR M K P CS
Sbjct: 484 HASSNDAEYIMLSNIMAASKRWEQAEQIRRKMARHGVEKTPACS 527
>gi|224135349|ref|XP_002322051.1| predicted protein [Populus trichocarpa]
gi|222869047|gb|EEF06178.1| predicted protein [Populus trichocarpa]
Length = 924
Score = 242 bits (618), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 150/421 (35%), Positives = 228/421 (54%), Gaps = 44/421 (10%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+N L+ ++ P+KA L Q+ ++S P D FT S L+ CA L G
Sbjct: 419 WNALIGGHAQNGDPRKALHLLFQM------TYSGQQP--DWFTISSLLLACAHLKSLQYG 470
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
++H + + G ++ +V T+L++ Y+ G K SS
Sbjct: 471 KEIHGYVLRNGLETDFFVGTSLLSHYIHCG--KASS------------------------ 504
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
AR LF+ M +N+VSW +I GY++ E+LALFRK ++ E + EI I++V
Sbjct: 505 -----ARVLFDRMKDKNLVSWNAMISGYSQNGLPYESLALFRKSLS-EGIQSHEIAIVSV 558
Query: 214 LPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVER 273
A Q ++ + HGY K D V +ID YAK GCI + K+F+ ++
Sbjct: 559 FGACSQLSALRLGKEAHGYVLK-ALQTEDAFVGCSIIDMYAKSGCIKESRKVFD--GLKD 615
Query: 274 KNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNF 333
KN+ SW +II +HG GKEA+E + RM+KVG P+R T++ +L AC H GLVEEGL +
Sbjct: 616 KNVASWNAIIVAHGIHGHGKEAIELYERMKKVGQMPDRFTYIGILMACGHAGLVEEGLKY 675
Query: 334 FDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFH 393
F +M + P ++HY CLIDML RAGRL+ A + +P E D +W +LL +C
Sbjct: 676 FKEMQNFNLIEPKLEHYACLIDMLARAGRLDDALRLVNEMPEE-ADNRIWSSLLRSCRTF 734
Query: 394 GNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSL 453
G +E+GE+V +K+LE+E +YVL+ N+ AG+G++ R+R++M E K GCS
Sbjct: 735 GALEIGEKVAKKLLELEPDKAENYVLLSNLYAGLGKWDGVRRVRQMMKEIGLQKDAGCSW 794
Query: 454 V 454
+
Sbjct: 795 I 795
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 91/345 (26%), Positives = 146/345 (42%), Gaps = 40/345 (11%)
Query: 53 LYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVN 112
LY + +++ S D+FT+ +I+ C + LG +H ++ K+G V+V
Sbjct: 125 LYGDVVKVFMDLVSDTDFQPDNFTFPSVIKACGGILDVRLGEVIHGMVIKMGLVLDVFVG 184
Query: 113 TALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVV 172
ALV MY G + ++ K+FD M P N+V
Sbjct: 185 NALVGMYGKCGAVDEAMKVFDFM-------------------------------PETNLV 213
Query: 173 SWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGY 232
SW +I ++ S ++ L +M+ E P +T++ +LP G+V IHG
Sbjct: 214 SWNSMICAFSENGFSRDSFDLLMEMLGEEGLLPDVVTVVTILPVCAGEGEVDIGMGIHGL 273
Query: 233 GEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMG 292
K G + ++ V N ++ Y+KCG + A F + KN+VSW ++IS F++ G
Sbjct: 274 AVKLGLSE-EVMVNNAMVYMYSKCGYLNEAQMSF--VKNNNKNVVSWNTMISAFSLEGDV 330
Query: 293 KEAVENFGRMQKVG--LKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHY 350
EA MQ G +K N VT L+VL AC + C ++
Sbjct: 331 NEAFNLLQEMQIQGEEMKANEVTILNVLPACLDKLQLRSLKELHGYSFRHC--FQHVELS 388
Query: 351 GCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGN 395
I + G L AEK GI + V W L+G + +G+
Sbjct: 389 NAFILAYAKCGALNSAEKVFHGIGDKT--VSSWNALIGGHAQNGD 431
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 118/253 (46%), Gaps = 34/253 (13%)
Query: 71 LFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSK 130
L D T ++ CA ++G +H + K+G V VN A+V MY G+L ++
Sbjct: 245 LPDVVTVVTILPVCAGEGEVDIGMGIHGLAVKLGLSEEVMVNNAMVYMYSKCGYLNEAQM 304
Query: 131 LFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEA 190
F + +N+V+WN MI+ G++ A +L +EM +
Sbjct: 305 SFVKNNNKNVVSWNTMISAFSLEGDVNEAFNLLQEMQIQG-------------------- 344
Query: 191 LALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLI 250
E + +E+TIL VLPA ++S + +HGY + F ++ N I
Sbjct: 345 ----------EEMKANEVTILNVLPACLDKLQLRSLKELHGYSFRHCFQHVELS--NAFI 392
Query: 251 DTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPN 310
YAKCG + SA K+F I K + SW ++I G A +G ++A+ +M G +P+
Sbjct: 393 LAYAKCGALNSAEKVFHGIG--DKTVSSWNALIGGHAQNGDPRKALHLLFQMTYSGQQPD 450
Query: 311 RVTFLSVLNACSH 323
T S+L AC+H
Sbjct: 451 WFTISSLLLACAH 463
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 82/320 (25%), Positives = 143/320 (44%), Gaps = 39/320 (12%)
Query: 79 FLIRTCATLSHPNLGTQLHAVISKVGFQSHVYV-NTALVNMYVSLGFLKDSSKLFDEMPE 137
L++ C G +LH +S + YV NT L+ MY G DS
Sbjct: 48 LLLQACGNQKDIETGRRLHKFVSDSTHYRNDYVLNTRLIKMYAMCGSPLDS--------- 98
Query: 138 RNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKM 197
R +F+ M +N++ W ++ GYTR + + +F +
Sbjct: 99 ----------------------RLVFDNMETKNLIQWNALVSGYTRNGLYGDVVKVFMDL 136
Query: 198 VACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCG 257
V+ +P T +V+ A DV+ ++IHG K G D+ V N L+ Y KCG
Sbjct: 137 VSDTDFQPDNFTFPSVIKACGGILDVRLGEVIHGMVIKMGLV-LDVFVGNALVGMYGKCG 195
Query: 258 CIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRM-QKVGLKPNRVTFLS 316
+ A K+F+ + NLVSW S+I F+ +G +++ + M + GL P+ VT ++
Sbjct: 196 AVDEAMKVFD--FMPETNLVSWNSMICAFSENGFSRDSFDLLMEMLGEEGLLPDVVTVVT 253
Query: 317 VLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSE 376
+L C+ G V+ G+ V + + ++ ++ M + G L +A+ + + +
Sbjct: 254 ILPVCAGEGEVDIGMGIHGLAV-KLGLSEEVMVNNAMVYMYSKCGYLNEAQMSF--VKNN 310
Query: 377 ITDVVVWRTLLGACSFHGNV 396
+VV W T++ A S G+V
Sbjct: 311 NKNVVSWNTMISAFSLEGDV 330
>gi|15235498|ref|NP_192184.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213324|sp|Q9SY02.1|PP301_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g02750
gi|4263522|gb|AAD15348.1| hypothetical protein [Arabidopsis thaliana]
gi|7269760|emb|CAB77760.1| hypothetical protein [Arabidopsis thaliana]
gi|332656824|gb|AEE82224.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 781
Score = 242 bits (618), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 139/381 (36%), Positives = 212/381 (55%), Gaps = 44/381 (11%)
Query: 109 VYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPC 168
V+ TA+V+ Y+ ++++ +LFD+MPERN V+WN M+ G V+ +E A+ LF+ MPC
Sbjct: 281 VFTWTAMVSGYIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQGERMEMAKELFDVMPC 340
Query: 169 RNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNG------- 221
RNV +W +I GY + + +EA LF KM + ++ A++ Q+G
Sbjct: 341 RNVSTWNTMITGYAQCGKISEAKNLFDKM-----PKRDPVSWAAMIAGYSQSGHSFEALR 395
Query: 222 -------------------------DVKSCQL---IHGYGEKRGFTAFDIRVLNCLIDTY 253
DV + +L +HG K G+ V N L+ Y
Sbjct: 396 LFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYET-GCFVGNALLLMY 454
Query: 254 AKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVT 313
KCG I A+ LF++++ K++VSW ++I+G++ HG G+ A+ F M++ GLKP+ T
Sbjct: 455 CKCGSIEEANDLFKEMAG--KDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDAT 512
Query: 314 FLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGI 373
++VL+ACSH GLV++G +F M ++ V+P+ +HY C++D+LGRAG LE A +
Sbjct: 513 MVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNM 572
Query: 374 PSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDA 433
P E D +W TLLGA HGN E+ E KI ME G YVL+ N+ A GR+GD
Sbjct: 573 PFE-PDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDV 631
Query: 434 ERLRRVMDERNAFKVPGCSLV 454
+LR M ++ KVPG S +
Sbjct: 632 GKLRVRMRDKGVKKVPGYSWI 652
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 103/389 (26%), Positives = 179/389 (46%), Gaps = 38/389 (9%)
Query: 20 HLLTTNSLLHHSQLFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSF 79
H + N L + +F+SL + Q QI PL DS +
Sbjct: 17 HYTSLNGLKRRCNNAHGAANFHSLKRATQ---------TQIQKSQTKPLLKCGDSDIKEW 67
Query: 80 LIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERN 139
+ + + L V ++ S V N +++ Y+ G + + KLFDEMPER+
Sbjct: 68 NVAISSYMRTGRCNEALR-VFKRMPRWSSVSYN-GMISGYLRNGEFELARKLFDEMPERD 125
Query: 140 LVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVA 199
LV+WNVMI G V+ L AR LFE MP R+V SW ++ GY + ++A ++F +M
Sbjct: 126 LVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRM-- 183
Query: 200 CEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCI 259
E ++++ A+L A QN ++ ++ E ++ NCL+ + K I
Sbjct: 184 ---PEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSW-----NCLLGGFVKKKKI 235
Query: 260 FSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGR--MQKVGLKPNRVTFLSV 317
A + F+ ++V +++VSW +II+G+A G EA + F +Q V T+ ++
Sbjct: 236 VEARQFFDSMNV--RDVVSWNTIITGYAQSGKIDEARQLFDESPVQDV------FTWTAM 287
Query: 318 LNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEI 377
++ +VEE FDKM E EV + ++ + R+E A++ +P
Sbjct: 288 VSGYIQNRMVEEARELFDKMPERNEV-----SWNAMLAGYVQGERMEMAKELFDVMPCR- 341
Query: 378 TDVVVWRTLLGACSFHGNVEMGERVTRKI 406
+V W T++ + G + + + K+
Sbjct: 342 -NVSTWNTMITGYAQCGKISEAKNLFDKM 369
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 96/358 (26%), Positives = 159/358 (44%), Gaps = 50/358 (13%)
Query: 113 TALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVV 172
AL++ YV ++++ LF LV+WN ++ G VK ++ AR F+ M R+VV
Sbjct: 192 NALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVV 251
Query: 173 SWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQ----- 227
SW II GY + + +EA LF E T A++ QN V+ +
Sbjct: 252 SWNTIITGYAQSGKIDEARQLFD-----ESPVQDVFTWTAMVSGYIQNRMVEEARELFDK 306
Query: 228 -----------LIHGY--GEKRGFTA--FD------IRVLNCLIDTYAKCGCIFSASKLF 266
++ GY GE+ FD + N +I YA+CG I A LF
Sbjct: 307 MPERNEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLF 366
Query: 267 EDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGL 326
+ + +++ VSW ++I+G++ G EA+ F +M++ G + NR +F S L+ C+
Sbjct: 367 DKMP--KRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVA 424
Query: 327 VEEGLNFFDKMVEECEVLPDIKHYGCLID-----MLGRAGRLEQAEKTALGIPSEITDVV 381
+E G ++V+ GC + M + G +E+A + + D+V
Sbjct: 425 LELGKQLHGRLVKGG------YETGCFVGNALLLMYCKCGSIEEANDLFKEMAGK--DIV 476
Query: 382 VWRTLLGACSFHGNVEMGERVTRKILEMER-GYGGDYVLMYNILAGVGRFGDAERLRR 438
W T++ S HG GE R M+R G D M +L+ G ++ R+
Sbjct: 477 SWNTMIAGYSRHG---FGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQ 531
>gi|115457318|ref|NP_001052259.1| Os04g0218100 [Oryza sativa Japonica Group]
gi|113563830|dbj|BAF14173.1| Os04g0218100, partial [Oryza sativa Japonica Group]
Length = 890
Score = 242 bits (618), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 128/322 (39%), Positives = 195/322 (60%), Gaps = 7/322 (2%)
Query: 137 ERNLVTWNVMITGLVKWGELEFARSLFEEMPC--RNVVSWTGIIDGYTRMNRSNEALALF 194
+ +L+ +N +I K + ARS+F+++P RNVV+WT +I G+ + SN+AL LF
Sbjct: 443 DEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLF 502
Query: 195 RKMVACEY-TEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRG-FTAFDIRVLNCLIDT 252
+M++ Y P+ TI +L A ++ + IH Y + + + V NCLID
Sbjct: 503 VEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDM 562
Query: 253 YAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRV 312
Y+KCG + +A +F+ +S +K+ +SWTS+++G+ MHG G EA++ F +M+K G P+ +
Sbjct: 563 YSKCGDVDTARHVFDSMS--QKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDI 620
Query: 313 TFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALG 372
TFL VL ACSH G+V++GL++FD M + + P +HY C ID+L R+GRL++A +T
Sbjct: 621 TFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYACAIDLLARSGRLDKAWRTVKD 680
Query: 373 IPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGD 432
+P E T VVW LL AC H NVE+ E K++EM G Y L+ NI A GR+ D
Sbjct: 681 MPMEPT-AVVWVALLSACRVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATAGRWKD 739
Query: 433 AERLRRVMDERNAFKVPGCSLV 454
R+R +M + K PGCS V
Sbjct: 740 VARIRHLMKKSGIKKRPGCSWV 761
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 96/331 (29%), Positives = 160/331 (48%), Gaps = 19/331 (5%)
Query: 80 LIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERN 139
++ C +L ++H + G V+V AL++ Y G ++++ K+F+ M ++
Sbjct: 271 ILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFKD 330
Query: 140 LVTWNVMITGLVKWGELEFARSLFEEMPCRN----VVSWTGIIDGYTRMNRSNEALALFR 195
+V+WN M+ G + G E A LF+ M N VV+WT +I GY++ S+EAL LFR
Sbjct: 331 VVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNLFR 390
Query: 196 KMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKR---------GFTAFDIRVL 246
+M+ + P+ +TI++VL A G IH Y K G D+ V
Sbjct: 391 QMIF-SGSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVY 449
Query: 247 NCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRM--QK 304
N LID Y+KC +A +F+DI +E +N+V+WT +I G A +G +A++ F M +
Sbjct: 450 NALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEP 509
Query: 305 VGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYG-CLIDMLGRAGRL 363
G+ PN T +L AC+H + G ++ CLIDM + G +
Sbjct: 510 YGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYSKCGDV 569
Query: 364 EQAEKTALGIPSEITDVVVWRTLLGACSFHG 394
+ A + + + W +++ HG
Sbjct: 570 DTARHVFDSMSQK--SAISWTSMMTGYGMHG 598
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 112/437 (25%), Positives = 190/437 (43%), Gaps = 90/437 (20%)
Query: 73 DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLF 132
D FT +++ C L G+ H +I GF+S+V++ ALV MY G L+++S +F
Sbjct: 154 DHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIF 213
Query: 133 DEMPER---NLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNE 189
DE+ +R ++++WN +++ VK +WT
Sbjct: 214 DEITQRGIDDVISWNSIVSAHVKSSN-----------------AWT-------------- 242
Query: 190 ALALFRKMVACEYTEPSE-----ITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIR 244
AL LF KM + +P+ I+I+ +LPA V + +HG + G T D+
Sbjct: 243 ALDLFSKMTLIVHEKPTNERSDIISIVNILPACGSLKAVPQTKEVHGNAIRNG-TFPDVF 301
Query: 245 VLNCLIDTYAKCGCIFSASKL-----FEDI------------------------SVERKN 275
V N LID YAKCG + +A K+ F+D+ ++ ++N
Sbjct: 302 VGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKEN 361
Query: 276 L----VSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGL 331
+ V+WT++I+G++ G EA+ F +M G PN VT +SVL+AC+ G +G
Sbjct: 362 IPLDVVTWTAVIAGYSQRGCSHEALNLFRQMIFSGSLPNCVTIISVLSACASLGAFSQGT 421
Query: 332 NFFDKMVEECEVL---------PDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVV 382
++ C + D+ Y LIDM + + A IP E +VV
Sbjct: 422 EIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVT 481
Query: 383 WRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAG--------VGRFGDAE 434
W ++G + +G+ ++ +++ G + + IL +G+ A
Sbjct: 482 WTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAY 541
Query: 435 RLRRVMDERNAFKVPGC 451
LR E +A+ V C
Sbjct: 542 VLRHHRYESSAYFVANC 558
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 62/274 (22%), Positives = 117/274 (42%), Gaps = 16/274 (5%)
Query: 135 MPERNLVTWNVMITGLVK----WGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEA 190
+P ++ + TG+V G ++A + E + V W +I + + R + A
Sbjct: 80 LPSEPFISPRSLGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSA 139
Query: 191 LALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLI 250
+ + +M+ T P T+ VL A + + HG GF + ++ + N L+
Sbjct: 140 INVSCRMLRAG-TRPDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFES-NVFICNALV 197
Query: 251 DTYAKCGCIFSASKLFEDISVER-KNLVSWTSIISGFAMHGMGKEAVENFGRM------Q 303
Y++CG + AS +F++I+ +++SW SI+S A++ F +M +
Sbjct: 198 AMYSRCGSLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEK 257
Query: 304 KVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRL 363
+ + ++ +++L AC V + + PD+ LID + G +
Sbjct: 258 PTNERSDIISIVNILPACGSLKAVPQTKEVHGNAIRN-GTFPDVFVGNALIDAYAKCGLM 316
Query: 364 EQAEKTALGIPSEITDVVVWRTLLGACSFHGNVE 397
E A K + E DVV W ++ S GN E
Sbjct: 317 ENAVKVFNMM--EFKDVVSWNAMVAGYSQSGNFE 348
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 96/230 (41%), Gaps = 57/230 (24%)
Query: 73 DSFTYSFLIRTCATLSHPNLGTQLHA-VISKVGFQSHVY-VNTALVNMYVSLGFLKDSSK 130
+++T S ++ CA L+ +G Q+HA V+ ++S Y V L++MY G + +
Sbjct: 515 NAYTISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYSKCGDVDTARH 574
Query: 131 LFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEA 190
+FD M +++ ++W M+T GY R +EA
Sbjct: 575 VFDSMSQKSAISWTSMMT-------------------------------GYGMHGRGSEA 603
Query: 191 LALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLN--- 247
L +F KM + P +IT L VL A G V +G + FD +
Sbjct: 604 LDIFDKMRKAGFV-PDDITFLVVLYACSHCGMV-----------DQGLSYFDSMSADYGL 651
Query: 248 --------CLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMH 289
C ID A+ G + A + +D+ +E +V W +++S +H
Sbjct: 652 TPRAEHYACAIDLLARSGRLDKAWRTVKDMPMEPTAVV-WVALLSACRVH 700
>gi|242041125|ref|XP_002467957.1| hypothetical protein SORBIDRAFT_01g037150 [Sorghum bicolor]
gi|241921811|gb|EER94955.1| hypothetical protein SORBIDRAFT_01g037150 [Sorghum bicolor]
Length = 650
Score = 242 bits (618), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 137/376 (36%), Positives = 219/376 (58%), Gaps = 7/376 (1%)
Query: 80 LIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERN 139
++ CA G H ++ + G S V V AL++MY S + + +LFD +
Sbjct: 275 VVAACAKSEVIQNGEVCHGLVVRAGLGSRVNVQNALIHMYSSCLDVVAARRLFDSSESLD 334
Query: 140 LVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVA 199
+WN MI+G +K G +E A++LF MP ++ VSW+ +I G + N+S+EAL +F M A
Sbjct: 335 HFSWNSMISGYLKNGRVEDAKALFNVMPDKDNVSWSAMIAGCVQNNQSSEALTVFDNMRA 394
Query: 200 CEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCI 259
E +P E+T+++V+ A ++ +L+H Y + + I + LID Y KCGC+
Sbjct: 395 HE-IKPDEVTLVSVISACTNLCALEQGKLVHEYIRQYQYN-ITIVLGTSLIDMYMKCGCM 452
Query: 260 FSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLK-PNRVTFLSVL 318
+A ++F+ VE K W ++I G AM+G+ +++ F M+ G+ P+ +TF VL
Sbjct: 453 EAALEVFD--MVEEKGTPCWNAVIVGLAMNGLVTRSLDMFSEMETSGIAVPSEITFTGVL 510
Query: 319 NACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEIT 378
+AC HGGLVEEG FF M + +++P+I+HYGC++D+LGRAG + +AE +P
Sbjct: 511 SACRHGGLVEEGRQFFKLMQNKYQIIPNIRHYGCMVDLLGRAGYVREAEDLIQSMPMS-P 569
Query: 379 DVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRR 438
DV W LLGAC H + E+GERV +K+++++ + G ++ NI A G + + LR
Sbjct: 570 DVPAWGALLGACWKHSDSEVGERVGKKLVKLDPHHDGFQTMLSNIYASEGMWQCVKDLRG 629
Query: 439 VMDERNAFKVPGCSLV 454
M + A KV GCS+V
Sbjct: 630 SMKQHVA-KVAGCSVV 644
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 128/525 (24%), Positives = 215/525 (40%), Gaps = 130/525 (24%)
Query: 28 LHHSQLFNTLLHFYSLAESPQKAF----LLYKQLQQIYTHSHSPL----PPLFDSFTYSF 79
LHHS L + L SP AF L+ L+Q H PL P D++T+
Sbjct: 59 LHHS------LQLFRLVRSP-NAFTCNTLIRAALRQGLPHLCFPLYASMPAAPDTYTHPL 111
Query: 80 LIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERN 139
L CA G Q+H+ K GF ++Y+ AL++MY + G + + ++FD P +
Sbjct: 112 LAAACAARGDAREGRQVHSHAVKHGFGDNLYLRNALMHMYSACGCVAGARRVFDAGPVWD 171
Query: 140 LVTWNVMITGLVKWGELEFARSLFEEMP-------------------------------C 168
V+WN ++ V+ G++E A +F MP
Sbjct: 172 AVSWNTILATYVRDGDVEQAVGVFARMPERSAAAVSSMVALFARTGMVEEARGVFDGAEH 231
Query: 169 RNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQL 228
R+ +WT +I + R + EALA+F M E E +++V+ A ++ +++ ++
Sbjct: 232 RDAFTWTAMISCFERNDLFVEALAVFSDMRE-EGWPVDEAVMVSVVAACAKSEVIQNGEV 290
Query: 229 IHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLF---------------------- 266
HG + G + + V N LI Y+ C + +A +LF
Sbjct: 291 CHGLVVRAGLGS-RVNVQNALIHMYSSCLDVVAARRLFDSSESLDHFSWNSMISGYLKNG 349
Query: 267 --EDIS-----VERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLN 319
ED + K+ VSW+++I+G + EA+ F M+ +KP+ VT +SV++
Sbjct: 350 RVEDAKALFNVMPDKDNVSWSAMIAGCVQNNQSSEALTVFDNMRAHEIKPDEVTLVSVIS 409
Query: 320 ACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQA------------- 366
AC++ +E+G + + + + I LIDM + G +E A
Sbjct: 410 ACTNLCALEQG-KLVHEYIRQYQYNITIVLGTSLIDMYMKCGCMEAALEVFDMVEEKGTP 468
Query: 367 -------------------------EKTALGIPSEITDVVVWRTLLGACSFHGNVEMGER 401
E + + +PSEIT + +L AC G VE G +
Sbjct: 469 CWNAVIVGLAMNGLVTRSLDMFSEMETSGIAVPSEIT----FTGVLSACRHGGLVEEGRQ 524
Query: 402 VTR------KILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVM 440
+ +I+ R YG M ++L G +AE L + M
Sbjct: 525 FFKLMQNKYQIIPNIRHYG----CMVDLLGRAGYVREAEDLIQSM 565
>gi|222625627|gb|EEE59759.1| hypothetical protein OsJ_12247 [Oryza sativa Japonica Group]
Length = 950
Score = 242 bits (618), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 135/378 (35%), Positives = 218/378 (57%), Gaps = 6/378 (1%)
Query: 77 YSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMP 136
+S ++ CA+L G ++H K+ ++V+V++AL++MY L D+ +F +P
Sbjct: 381 FSSVLGACASLQDLRSGRKIHNQTLKMACSNNVFVSSALIDMYCKCKQLPDAQMIFYSLP 440
Query: 137 ERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRK 196
++N+V WN +I+G ++ A LF++MP RNV SW II GY + + +AL F
Sbjct: 441 QKNIVCWNSLISGYSNNSKMVEAEELFKKMPARNVASWNSIISGYAQNRQFIDALKSFHA 500
Query: 197 MVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKC 256
M+A + P EIT +VL A ++ +++H K G I V L D YAK
Sbjct: 501 MLASGQS-PGEITFSSVLLACASLCSLEMGKMVHAKIIKLGIKE-SIFVGTALSDMYAKS 558
Query: 257 GCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLS 316
G + S+ ++F ++ ++N V+WT++I G A +G +E++ F M G+ PN TFL+
Sbjct: 559 GDLDSSKRVFYEMP--KRNDVAWTAMIQGLAENGFAEESILLFEDMISAGITPNEQTFLA 616
Query: 317 VLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSE 376
+L ACSH GLVE +++F+ M++ C + P KHY C++D+L RAG L +AE L I S+
Sbjct: 617 ILFACSHSGLVEHAMHYFE-MMQACGISPKAKHYTCMVDVLARAGHLAEAEDLLLKIESK 675
Query: 377 ITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERL 436
++ W LL AC+ + N EMGER +++ E+++ YVL+ N+ A G++ DA +
Sbjct: 676 -SEANSWAALLSACNIYRNKEMGERAAKRLQELDKDNTAGYVLLSNMYASCGKWKDAAEM 734
Query: 437 RRVMDERNAFKVPGCSLV 454
R +M N K GCS V
Sbjct: 735 RILMKGINLKKDGGCSWV 752
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 97/399 (24%), Positives = 178/399 (44%), Gaps = 51/399 (12%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNL 92
F ++ + L E P+ A ++ ++ + SP + T +I+ C +L
Sbjct: 212 FFTAMIAGFVLNELPKDALGVF---HEMLSCGVSP-----NEITLVSVIKACIGAGEFDL 263
Query: 93 GTQLHAVISKVGF-QSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLV 151
+ + K ++ V +L+ +Y+ G + ++FDEM R++V+W ++
Sbjct: 264 AMSIVGLAMKSNLLDKNLGVRNSLITLYLRKGDADAARRMFDEMEVRDVVSWTALLDVYA 323
Query: 152 KWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITIL 211
+ G+LE AR + +EMP RN VSW ++ + + + EA++L+ +M+A + P+
Sbjct: 324 ELGDLEGARRVLDEMPERNEVSWGTLVARHEQKGNAKEAVSLYSQMLA-DGCRPNISCFS 382
Query: 212 AVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDI-- 269
+VL A D++S + IH K + ++ V + LID Y KC + A +F +
Sbjct: 383 SVLGACASLQDLRSGRKIHNQTLKMACSN-NVFVSSALIDMYCKCKQLPDAQMIFYSLPQ 441
Query: 270 ---------------------------SVERKNLVSWTSIISGFAMHGMGKEAVENFGRM 302
+ +N+ SW SIISG+A + +A+++F M
Sbjct: 442 KNIVCWNSLISGYSNNSKMVEAEELFKKMPARNVASWNSIISGYAQNRQFIDALKSFHAM 501
Query: 303 QKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHY----GCLIDMLG 358
G P +TF SVL AC+ +E G KMV + IK L DM
Sbjct: 502 LASGQSPGEITFSSVLLACASLCSLEMG-----KMVHAKIIKLGIKESIFVGTALSDMYA 556
Query: 359 RAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVE 397
++G L+ +++ +P + V W ++ + +G E
Sbjct: 557 KSGDLDSSKRVFYEMPKR--NDVAWTAMIQGLAENGFAE 593
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 80/322 (24%), Positives = 149/322 (46%), Gaps = 35/322 (10%)
Query: 115 LVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSW 174
+V +V G + + +LFD MPER++V++ M+ L+K G + A L+ + P +V +
Sbjct: 154 MVREHVKAGDIVSARRLFDGMPERSVVSYTTMVDALMKRGSVRDAVELYRQCPLCSVPFF 213
Query: 175 TGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGE 234
T +I G+ +AL +F +M++C + P+EIT+++V+ A G+ I G
Sbjct: 214 TAMIAGFVLNELPKDALGVFHEMLSCGVS-PNEITLVSVIKACIGAGEFDLAMSIVGLAM 272
Query: 235 KRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVE---------------------- 272
K ++ V N LI Y + G +A ++F+++ V
Sbjct: 273 KSNLLDKNLGVRNSLITLYLRKGDADAARRMFDEMEVRDVVSWTALLDVYAELGDLEGAR 332
Query: 273 -------RKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGG 325
+N VSW ++++ G KEAV + +M G +PN F SVL AC+
Sbjct: 333 RVLDEMPERNEVSWGTLVARHEQKGNAKEAVSLYSQMLADGCRPNISCFSSVLGACASLQ 392
Query: 326 LVEEGLNFFDKMVE-ECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWR 384
+ G ++ ++ C ++ LIDM + +L A+ +P + ++V W
Sbjct: 393 DLRSGRKIHNQTLKMACS--NNVFVSSALIDMYCKCKQLPDAQMIFYSLPQK--NIVCWN 448
Query: 385 TLLGACSFHGNVEMGERVTRKI 406
+L+ S + + E + +K+
Sbjct: 449 SLISGYSNNSKMVEAEELFKKM 470
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 105/234 (44%), Gaps = 39/234 (16%)
Query: 75 FTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDE 134
T+S ++ CA+L +G +HA I K+G + ++V TAL +MY G L S ++F E
Sbjct: 511 ITFSSVLLACASLCSLEMGKMVHAKIIKLGIKESIFVGTALSDMYAKSGDLDSSKRVFYE 570
Query: 135 MPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALF 194
MP+RN V W MI GL + G E + LFE+M I G T
Sbjct: 571 MPKRNDVAWTAMIQGLAENGFAEESILLFEDM----------ISAGIT------------ 608
Query: 195 RKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYA 254
P+E T LA+L A +G V+ + G + + C++D A
Sbjct: 609 ----------PNEQTFLAILFACSHSGLVEHAMHYFEMMQACGISP-KAKHYTCMVDVLA 657
Query: 255 KCGCIFSASKLFEDISVERKNLV-SWTSIISGFAMH---GMGKEAVENFGRMQK 304
+ G + A L + +E K+ SW +++S ++ MG+ A + + K
Sbjct: 658 RAGHLAEAEDLL--LKIESKSEANSWAALLSACNIYRNKEMGERAAKRLQELDK 709
>gi|356498743|ref|XP_003518209.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Glycine max]
Length = 573
Score = 242 bits (618), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 146/458 (31%), Positives = 238/458 (51%), Gaps = 61/458 (13%)
Query: 16 QIHSHLLTTNSLLHHSQLFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLF--- 72
Q+H+H++ N L + N LL+ Y+ ++ A+ L+ L + + S + F
Sbjct: 21 QVHAHVVA-NGTLQDLVIANKLLYTYAQHKAIDDAYSLFDGLTMRDSKTWSVMVGGFAKA 79
Query: 73 --------------------DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVN 112
D++T F+IRTC + +G +H V+ K G S +V
Sbjct: 80 GDHAGCYATFRELLRCGVTPDNYTLPFVIRTCRDRTDLQIGRVIHDVVLKHGLLSDHFVC 139
Query: 113 TALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVV 172
+LV+MY ++D A+ LFE M +++V
Sbjct: 140 ASLVDMYAKCIVVED-------------------------------AQRLFERMLSKDLV 168
Query: 173 SWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGY 232
+WT +I Y N + E+L LF +M E P ++ ++ V+ A + G + + + Y
Sbjct: 169 TWTVMIGAYADCN-AYESLVLFDRMRE-EGVVPDKVAMVTVVNACAKLGAMHRARFANDY 226
Query: 233 GEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMG 292
+ GF+ D+ + +ID YAKCG + SA ++F+ ++ KN++SW+++I+ + HG G
Sbjct: 227 IVRNGFS-LDVILGTAMIDMYAKCGSVESAREVFD--RMKEKNVISWSAMIAAYGYHGRG 283
Query: 293 KEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGC 352
K+A++ F M + PNRVTF+S+L ACSH GL+EEGL FF+ M EE V PD+KHY C
Sbjct: 284 KDAIDLFHMMLSCAILPNRVTFVSLLYACSHAGLIEEGLRFFNSMWEEHAVRPDVKHYTC 343
Query: 353 LIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERG 412
++D+LGRAGRL++A + + E D +W LLGAC H +E+ E+ +LE++
Sbjct: 344 MVDLLGRAGRLDEALRLIEAMTVE-KDERLWSALLGACRIHSKMELAEKAANSLLELQPQ 402
Query: 413 YGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPG 450
G YVL+ NI A G++ + R +M +R K+PG
Sbjct: 403 NPGHYVLLSNIYAKAGKWEKVAKFRDMMTQRKLKKIPG 440
>gi|345505230|gb|AEN99839.1| chlororespiratory reduction 4 [Nasturtium officinale]
Length = 614
Score = 242 bits (618), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 133/344 (38%), Positives = 204/344 (59%), Gaps = 8/344 (2%)
Query: 113 TALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVV 172
+L+ YV G ++D+ LF MP R++VTW MI G K G + A++LF++MP R+VV
Sbjct: 257 NSLIYGYVKHGRMEDAKDLFHVMPRRDVVTWATMIDGYAKLGFVHKAKTLFDQMPHRDVV 316
Query: 173 SWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGY 232
++ ++ GY + EAL +F M + P E T++ VL AI Q G + +H Y
Sbjct: 317 AYNSMMAGYVQNRHHMEALEIFSDMEKESHLTPDETTLVIVLSAIAQLGQLSKAMDMHLY 376
Query: 233 -GEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGM 291
EK+ + + V LID Y+KCG I A +FE I E K++ W ++I G A+HG+
Sbjct: 377 IVEKQFYLGGKLGV--ALIDMYSKCGSIQQAMCVFEGI--ENKSIDHWNAMIGGLAIHGL 432
Query: 292 GKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYG 351
G+ A +++ ++P+ +TF+ VLNACSH GLV+EGL F+ M + ++ P ++HYG
Sbjct: 433 GESAFNILLEIERRSIEPDYITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYG 492
Query: 352 CLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMER 411
C++D+L R G +E A+ +P E D V+WRT L AC+ H E+GE V + ++ ++
Sbjct: 493 CMVDLLSRCGSIELAKNLIEEMPIEPND-VIWRTFLTACNHHKEFEIGELVAKHLI-LQA 550
Query: 412 GYG-GDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
GY YVL+ N+ A GR+ D +R +M ER KVPGCS +
Sbjct: 551 GYNPSSYVLLSNMYASFGRWKDVRNVRTMMKERKLQKVPGCSWI 594
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 109/409 (26%), Positives = 200/409 (48%), Gaps = 33/409 (8%)
Query: 39 HFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLF------------DSFTYSFLIRTCAT 86
H S A K L+ + + ++H P L D F++S +++ C+
Sbjct: 75 HVCSFAPGDVKDPFLWNLVIKSHSHGVDPRRALLWFCLMLENGISVDKFSFSLVLKACSR 134
Query: 87 LSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVM 146
L G Q+H + K G S +++ L+ +Y+ G L + ++FD MP+R+ V++N M
Sbjct: 135 LGFLKGGMQIHGFLRKTGIWSDLFLQNCLIGLYLKCGCLGFARQIFDRMPQRDSVSYNSM 194
Query: 147 ITGLVKWGELEFARSLFEEMP--CRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTE 204
I G +K G +E AR LF+ MP +N++SW +I GY ++++ + + K+ A E E
Sbjct: 195 IDGYIKCGLIESARELFDLMPREMKNLISWNSMISGYA---QTSDGVNIASKLFA-EMPE 250
Query: 205 PSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASK 264
I+ +++ ++G ++ + + +R D+ +ID YAK G + A
Sbjct: 251 KDLISWNSLIYGYVKHGRMEDAKDLFHVMPRR-----DVVTWATMIDGYAKLGFVHKAKT 305
Query: 265 LFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVG-LKPNRVTFLSVLNACSH 323
LF+ + +++V++ S+++G+ + EA+E F M+K L P+ T + VL+A +
Sbjct: 306 LFDQMP--HRDVVAYNSMMAGYVQNRHHMEALEIFSDMEKESHLTPDETTLVIVLSAIAQ 363
Query: 324 GGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVW 383
G + + ++ +VE+ L K LIDM + G ++QA GI ++ D W
Sbjct: 364 LGQLSKAMDMHLYIVEKQFYLGG-KLGVALIDMYSKCGSIQQAMCVFEGIENKSID--HW 420
Query: 384 RTLLGACSFHGNVEMGERVTRKILEME-RGYGGDYVLMYNILAGVGRFG 431
++G + HG +GE +LE+E R DY+ +L G
Sbjct: 421 NAMIGGLAIHG---LGESAFNILLEIERRSIEPDYITFVGVLNACSHSG 466
>gi|7362769|emb|CAB83139.1| putative protein [Arabidopsis thaliana]
Length = 558
Score = 242 bits (618), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 142/414 (34%), Positives = 230/414 (55%), Gaps = 25/414 (6%)
Query: 46 SPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGF 105
SPQ+ + L+ + H SP D T+ FL+ + H LG + HA I G
Sbjct: 40 SPQRHSPISVYLR-MRNHRVSP-----DFHTFPFLLPSFHNPLHLPLGQRTHAQILLFGL 93
Query: 106 QSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEE 165
+V T+L+NMY S G L+ + ++FD+ ++L WN ++ K G ++ AR LF+E
Sbjct: 94 DKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLIDDARKLFDE 153
Query: 166 MPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACE----YTEPSEITILAVLPAIWQNG 221
MP RNV+SW+ +I+GY + EAL LFR+M + + P+E T+ VL A + G
Sbjct: 154 MPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLG 213
Query: 222 DVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTS 281
++ + +H Y +K DI + LID YAKCG + A ++F + +K++ ++++
Sbjct: 214 ALEQGKWVHAYIDKY-HVEIDIVLGTALIDMYAKCGSLERAKRVFNALG-SKKDVKAYSA 271
Query: 282 IISGFAMHGMGKEAVENFGRMQKV-GLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEE 340
+I AM+G+ E + F M + PN VTF+ +L AC H GL+ EG ++F M+EE
Sbjct: 272 MICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYFKMMIEE 331
Query: 341 CEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGE 400
+ P I+HYGC++D+ GR+G +++AE +P E DV++W +LL G+++ E
Sbjct: 332 FGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPME-PDVLIWGSLLSGSRMLGDIKTCE 390
Query: 401 RVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
++++E++ G YVL+ N+ A GR+ M+ N KVPGCS V
Sbjct: 391 GALKRLIELDPMNSGAYVLLSNVYAKTGRW---------MEGIN--KVPGCSYV 433
>gi|222616851|gb|EEE52983.1| hypothetical protein OsJ_35654 [Oryza sativa Japonica Group]
Length = 632
Score = 242 bits (618), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 132/356 (37%), Positives = 213/356 (59%), Gaps = 10/356 (2%)
Query: 92 LGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLV 151
G LH +++ G V ++ ALV+M+ G ++ + ++FD M +++ +W M+
Sbjct: 263 FGIMLHKYVTEGGVARSVNLDNALVDMFGKCGCVRYAREVFDGMEVKDVYSWTSMVNAYA 322
Query: 152 KWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITIL 211
K G+LE A LF++MP RNVVSW+ +I Y+++N+ EA+ LFR+M+A +P + T++
Sbjct: 323 KCGDLESAEQLFKDMPRRNVVSWSCMIAAYSQLNQPEEAVWLFREMIAAG-VDPIDATLV 381
Query: 212 AVLPAIWQNGDVKSCQLIHG---YGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFED 268
+VL A Q G + + I+ K G T + + N LID +AKCG + ASKLF++
Sbjct: 382 SVLSACAQLGCLDLGRWIYENYIVSNKIGLT---VNLGNALIDMFAKCGDVGEASKLFDE 438
Query: 269 ISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVE 328
++ +N+VSW ++I A+HG +EA+ F +++ + P+++TFL +L +CSH GLV
Sbjct: 439 MA--ERNVVSWNTMIMAHAVHGQSEEAIRLFEQLKGENIVPDQITFLGLLASCSHSGLVS 496
Query: 329 EGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLG 388
EG +F +M + P ++HY C+ID+LG+ G LE+A + A G+P E D W LL
Sbjct: 497 EGRRYFKEMEMFYRIEPRVEHYACMIDLLGKVGLLEEAFEVARGMPME-ADEAGWGALLN 555
Query: 389 ACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERN 444
AC HGNVE+G V K++E++ G YVLM I A ++ + LR M +R
Sbjct: 556 ACRMHGNVEIGACVADKLVELDPSDSGIYVLMSQIYASKNKWDQVKMLRMTMRDRG 611
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 115/455 (25%), Positives = 195/455 (42%), Gaps = 84/455 (18%)
Query: 30 HSQLFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSH 89
++ + T++ + A P +A L++++ + LP D+ T+ F ++ A +
Sbjct: 100 NAYMLGTMMRGFLRARLPARALGLFRRVVR------DRLPA--DARTFVFAVKAAAAAAE 151
Query: 90 ------PNLGTQLHAVISKVGFQSH-VYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVT 142
P+ G +H K GF V V ALV+ Y + L D+ K+FDE
Sbjct: 152 SEHGGTPSGGEAIHCAALKCGFVGESVLVGNALVHFYANHKSLDDAGKVFDE-------- 203
Query: 143 WNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEY 202
MP R+VVSWT ++DGY R ++EA LF +MV
Sbjct: 204 -----------------------MPERDVVSWTTLVDGYARAGLADEAWRLFCRMVVVGG 240
Query: 203 TEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSA 262
P+ +T++A + AI Q G + ++H Y + G A + + N L+D + KCGC+ A
Sbjct: 241 MRPNAVTLVAAVSAIGQMGLLAFGIMLHKYVTEGG-VARSVNLDNALVDMFGKCGCVRYA 299
Query: 263 SKLFEDISVE-----------------------------RKNLVSWTSIISGFAMHGMGK 293
++F+ + V+ R+N+VSW+ +I+ ++ +
Sbjct: 300 REVFDGMEVKDVYSWTSMVNAYAKCGDLESAEQLFKDMPRRNVVSWSCMIAAYSQLNQPE 359
Query: 294 EAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCL 353
EAV F M G+ P T +SVL+AC+ G ++ G ++ + ++ + L
Sbjct: 360 EAVWLFREMIAAGVDPIDATLVSVLSACAQLGCLDLGRWIYENYIVSNKIGLTVNLGNAL 419
Query: 354 IDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGY 413
IDM + G + +A K + +VV W T++ A + HG E R + E +G
Sbjct: 420 IDMFAKCGDVGEASKLFDEMAER--NVVSWNTMIMAHAVHGQSEEAIR----LFEQLKGE 473
Query: 414 G--GDYVLMYNILAGVGRFGDAERLRRVMDERNAF 446
D + +LA G RR E F
Sbjct: 474 NIVPDQITFLGLLASCSHSGLVSEGRRYFKEMEMF 508
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 116/246 (47%), Gaps = 11/246 (4%)
Query: 167 PCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIW-----QNG 221
P N ++ G+ R AL LFR++V + + AV A G
Sbjct: 97 PGPNAYMLGTMMRGFLRARLPARALGLFRRVVRDRLPADARTFVFAVKAAAAAAESEHGG 156
Query: 222 DVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTS 281
+ IH K GF + V N L+ YA + A K+F+++ +++VSWT+
Sbjct: 157 TPSGGEAIHCAALKCGFVGESVLVGNALVHFYANHKSLDDAGKVFDEMP--ERDVVSWTT 214
Query: 282 IISGFAMHGMGKEAVENFGRMQKV-GLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEE 340
++ G+A G+ EA F RM V G++PN VT ++ ++A GL+ G+ K V E
Sbjct: 215 LVDGYARAGLADEAWRLFCRMVVVGGMRPNAVTLVAAVSAIGQMGLLAFGI-MLHKYVTE 273
Query: 341 CEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGE 400
V + L+DM G+ G + A + G+ E+ DV W +++ A + G++E E
Sbjct: 274 GGVARSVNLDNALVDMFGKCGCVRYAREVFDGM--EVKDVYSWTSMVNAYAKCGDLESAE 331
Query: 401 RVTRKI 406
++ + +
Sbjct: 332 QLFKDM 337
>gi|15232821|ref|NP_190337.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206890|sp|Q9SN85.1|PP267_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g47530
gi|6522536|emb|CAB61979.1| putative protein [Arabidopsis thaliana]
gi|62320272|dbj|BAD94558.1| hypothetical protein [Arabidopsis thaliana]
gi|332644772|gb|AEE78293.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 591
Score = 242 bits (618), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 143/425 (33%), Positives = 225/425 (52%), Gaps = 49/425 (11%)
Query: 35 NTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLGT 94
NT++ +SL+++P + F L++ L++ +S P PL SF I++ L G
Sbjct: 81 NTMIRAFSLSQTPCEGFRLFRSLRR---NSSLPANPLSSSFALKCCIKSGDLLG----GL 133
Query: 95 QLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWG 154
Q+H I GF S + T L+++Y + D+ K+FDE+P+
Sbjct: 134 QIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPK----------------- 176
Query: 155 ELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMV----ACEYTEPSEITI 210
R+ VSW + Y R R+ + L LF KM C +P +T
Sbjct: 177 --------------RDTVSWNVLFSCYLRNKRTRDVLVLFDKMKNDVDGC--VKPDGVTC 220
Query: 211 LAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDIS 270
L L A G + + +H + ++ G + + + N L+ Y++CG + A ++F
Sbjct: 221 LLALQACANLGALDFGKQVHDFIDENGLSG-ALNLSNTLVSMYSRCGSMDKAYQVF--YG 277
Query: 271 VERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEG 330
+ +N+VSWT++ISG AM+G GKEA+E F M K G+ P T +L+ACSH GLV EG
Sbjct: 278 MRERNVVSWTALISGLAMNGFGKEAIEAFNEMLKFGISPEEQTLTGLLSACSHSGLVAEG 337
Query: 331 LNFFDKMVE-ECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGA 389
+ FFD+M E ++ P++ HYGC++D+LGRA L++A + + D +WRTLLGA
Sbjct: 338 MMFFDRMRSGEFKIKPNLHHYGCVVDLLGRARLLDKAYSLIKSMEMK-PDSTIWRTLLGA 396
Query: 390 CSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVP 449
C HG+VE+GERV ++E++ GDYVL+ N + VG++ LR +M E+ P
Sbjct: 397 CRVHGDVELGERVISHLIELKAEEAGDYVLLLNTYSTVGKWEKVTELRSLMKEKRIHTKP 456
Query: 450 GCSLV 454
GCS +
Sbjct: 457 GCSAI 461
>gi|224115616|ref|XP_002332100.1| predicted protein [Populus trichocarpa]
gi|222874920|gb|EEF12051.1| predicted protein [Populus trichocarpa]
Length = 474
Score = 242 bits (618), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 161/472 (34%), Positives = 249/472 (52%), Gaps = 50/472 (10%)
Query: 12 NITTQIHSHLLTTNSLLHHSQ--------------LFNTLLHFYSLAESPQKAFLLYKQL 57
N QIHS LLTT LL ++ LFNTL +A+L + Q
Sbjct: 21 NQVKQIHS-LLTTKGLLFYNPNTSPNDNSKWKTTLLFNTL----------NRAYLNFGQH 69
Query: 58 QQ-------IYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVY 110
QQ + H P +S T+ +I+ AT S +GT LH G +
Sbjct: 70 QQTLHLFALMLAHQTPP-----NSHTFPSVIKA-ATHSCLFIGTSLHTQAINRGVLYDPF 123
Query: 111 VNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRN 170
+ T+L+ MY G+L ++ K+FDE+ +V +N + K G++ A LF+ MP R+
Sbjct: 124 IQTSLLGMYSQFGYLLNACKVFDEISHPCIVEYNATLDAYAKNGDMGSACCLFKSMPKRD 183
Query: 171 VVSWTGIIDGYTRMNRSNEALALFRKM-----VACEYTEPSEITILAVLPA---IWQNGD 222
VVSWT +I+G+ + EA+ LFR+M V C + +P+E T ++VL + + + G
Sbjct: 184 VVSWTSVINGFAKNGLFGEAIRLFREMMLHDDVKCCFVKPNEATYVSVLSSCANLDERGV 243
Query: 223 VKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSI 282
+ + IHGY R + + LID Y K GC+ +A +++ + V K + +W +I
Sbjct: 244 LCIGKQIHGY-IVRNEVFVTVFIGTTLIDFYGKVGCLSNAIRVYNQMMV--KKVCTWNAI 300
Query: 283 ISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECE 342
IS A +G ++A++ F +M+ GL PN VTF++VL AC+ LVE GL F M E
Sbjct: 301 ISSLANNGREEQALDMFKKMKGEGLCPNEVTFIAVLTACARAKLVEIGLELFQSMAGEFG 360
Query: 343 VLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERV 402
++P ++HYGC++D+LG AG L +A + +P E D LLGAC HG +++G V
Sbjct: 361 LVPIMEHYGCVVDLLGMAGLLREASEFIRRMPFE-PDASALGALLGACKIHGAIDLGNEV 419
Query: 403 TRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
++LE++ + G YV + +I GV R+G A +R+ M E VP CSL+
Sbjct: 420 GSRLLELQPQHCGQYVALSSIHVGVNRWGVAADIRKTMVEARIRIVPACSLI 471
>gi|326496937|dbj|BAJ98495.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 491
Score = 242 bits (617), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 137/418 (32%), Positives = 215/418 (51%), Gaps = 39/418 (9%)
Query: 69 PPLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMY--------- 119
PP D + SF + +C + + LH+ ++G VYV +A V+ Y
Sbjct: 69 PP--DHLSLSFSLHSCTRSPSLPVASLLHSFAVRLGHARDVYVLSAAVSAYFRATDVASA 126
Query: 120 -----------------------VSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGEL 156
+ G L+ + FD MPERN+V+WN M+ G L
Sbjct: 127 ERLFSYTKDVADVVTWTTMVTGHANTGDLERARWFFDAMPERNVVSWNAMLGAYASAGML 186
Query: 157 EFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPA 216
AR LF+ MP RN SW+ ++ G R NR EAL +F +M+ P+E +++ + A
Sbjct: 187 SKARKLFDIMPSRNAASWSSMVTGLVRSNRCEEALRVFSEMIGMGVV-PNESALVSAVSA 245
Query: 217 IWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNL 276
++ +H Y KR + + ++D Y KCG I +A ++F + V KN+
Sbjct: 246 CSLLRSLEHGVWVHAYA-KRELQGMSLVLATAIVDMYGKCGGIHNAVRVFAAMPV--KNI 302
Query: 277 VSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDK 336
SW S+I+G AM+G +A+ F +MQ G++PN +TF+ +L ACSH GLV+EG F+
Sbjct: 303 YSWNSMITGLAMNGREMQALSLFWKMQMAGVRPNDITFIGLLGACSHSGLVDEGRWLFNM 362
Query: 337 MVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNV 396
MV + P +HYG ++D+LGRAG + +A +P E +W L GAC HG V
Sbjct: 363 MVNGFGIQPVQEHYGLMVDLLGRAGHVREAVDFVNSMPVE-PHPGLWGALAGACKIHGEV 421
Query: 397 EMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
E+GE + +K++E+E +G Y+L+ NI R+ D +RR++ +R K G ++V
Sbjct: 422 ELGEEIAKKLIELEPRHGSRYILLSNIYGASNRWDDMATVRRLLKDRKVPKGTGNAMV 479
>gi|356505262|ref|XP_003521411.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g37570-like [Glycine max]
Length = 566
Score = 242 bits (617), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 148/453 (32%), Positives = 223/453 (49%), Gaps = 69/453 (15%)
Query: 64 SHSPLPPLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMY---- 119
+H LP DSFTY +I+ C+ G LH + G +YV T+L++MY
Sbjct: 121 AHGALP---DSFTYPSVIKACSGTCKAREGKSLHGSAFRCGVDQDLYVGTSLIDMYGKCG 177
Query: 120 ---------------------------VSLGFLKDSSKLFDEMPERNLVTWNVMITGLVK 152
V++G + ++ KLFDEMP RN+ +WN M+ G VK
Sbjct: 178 EIADARKVFDGMSDRNVVSWTAMLVGYVAVGDVVEARKLFDEMPHRNVASWNSMLQGFVK 237
Query: 153 WGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNR-------------------------- 186
G+L AR +F+ MP +NVVS+T +IDGY +
Sbjct: 238 MGDLSGARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFDCSLEKDVVAWSALISGY 297
Query: 187 -----SNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAF 241
N+AL +F +M +P E +++++ A Q G ++ Q + Y K
Sbjct: 298 VQNGLPNQALRVFLEMELMN-VKPDEFILVSLMSASAQLGHLELAQWVDSYVSKICIDLQ 356
Query: 242 DIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGR 301
V+ L+D AKCG + A KLF++ R+++V + S+I G ++HG G+EAV F R
Sbjct: 357 QDHVIAALLDMNAKCGNMERALKLFDE--KPRRDVVLYCSMIQGLSIHGRGEEAVNLFNR 414
Query: 302 MQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAG 361
M GL P+ V F +L ACS GLV+EG N+F M ++ + P HY C++D+L R+G
Sbjct: 415 MLMEGLTPDEVAFTVILTACSRAGLVDEGRNYFQSMKQKYCISPLPDHYACMVDLLSRSG 474
Query: 362 RLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMY 421
+ A + IP E W LLGAC +G+ E+GE V ++ E+E +YVL+
Sbjct: 475 HIRDAYELIKLIPWE-PHAGAWGALLGACKLYGDSELGEIVANRLFELEPLNAANYVLLS 533
Query: 422 NILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
+I A R+ D +R M ER K+PG S +
Sbjct: 534 DIYAAAERWIDVSLVRSKMRERRVRKIPGSSKI 566
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 125/284 (44%), Gaps = 27/284 (9%)
Query: 156 LEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLP 215
L +A S+F + + V W +I + + N + L+ F +M A P T +V+
Sbjct: 78 LSYASSVFHRVLAPSTVLWNTLIKSHCQKNLFSHTLSAFARMKA-HGALPDSFTYPSVIK 136
Query: 216 AIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKN 275
A + + +HG + G D+ V LID Y KCG I A K+F+ +S +N
Sbjct: 137 ACSGTCKAREGKSLHGSAFRCGVDQ-DLYVGTSLIDMYGKCGEIADARKVFDGMS--DRN 193
Query: 276 LVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNR--VTFLSVLNACSHGGLVEEGLNF 333
+VSWT+++ G+ G EA + F M P+R ++ S+L G +
Sbjct: 194 VVSWTAMLVGYVAVGDVVEARKLFDEM------PHRNVASWNSMLQGFVKMGDLSGARGV 247
Query: 334 FDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFH 393
FD M E+ ++ + +ID +AG + A L S DVV W L+
Sbjct: 248 FDAMPEK-----NVVSFTTMIDGYAKAG--DMAAARFLFDCSLEKDVVAWSALIS----- 295
Query: 394 GNVEMG--ERVTRKILEME-RGYGGDYVLMYNILAGVGRFGDAE 434
G V+ G + R LEME D ++ ++++ + G E
Sbjct: 296 GYVQNGLPNQALRVFLEMELMNVKPDEFILVSLMSASAQLGHLE 339
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 69/166 (41%), Gaps = 11/166 (6%)
Query: 277 VSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDK 336
V W ++I + + F RM+ G P+ T+ SV+ ACS EG +
Sbjct: 94 VLWNTLIKSHCQKNLFSHTLSAFARMKAHGALPDSFTYPSVIKACSGTCKAREGKSLHGS 153
Query: 337 MVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNV 396
C V D+ LIDM G+ G + A K G+ +VV W +L G V
Sbjct: 154 AF-RCGVDQDLYVGTSLIDMYGKCGEIADARKVFDGMSDR--NVVSWTAMLV-----GYV 205
Query: 397 EMGERVTRKILEMERGYGGDYVLMYN-ILAGVGRFGDAERLRRVMD 441
+G+ V + L E + V +N +L G + GD R V D
Sbjct: 206 AVGDVVEARKLFDEMPHRN--VASWNSMLQGFVKMGDLSGARGVFD 249
>gi|225459736|ref|XP_002284744.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
[Vitis vinifera]
Length = 758
Score = 242 bits (617), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 138/386 (35%), Positives = 213/386 (55%), Gaps = 9/386 (2%)
Query: 73 DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLF 132
D T S ++ L +G +H + K G S V++AL++MY + S++F
Sbjct: 249 DGTTISSVLPAVGDLEDLVMGILIHGYVIKQGLVSDKCVSSALIDMYGKCSCTSEMSQVF 308
Query: 133 DEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCR----NVVSWTGIIDGYTRMNRSN 188
D+M ++ + N I GL + G++E + LF ++ + NVVSWT +I ++ R
Sbjct: 309 DQMDHMDVGSCNAFIFGLSRNGQVESSLRLFRQLKDQGMELNVVSWTSMIACCSQNGRDI 368
Query: 189 EALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNC 248
EAL LFR+M +P+ +TI +LPA + + H + +RG + D+ V +
Sbjct: 369 EALELFREM-QIAGVKPNSVTIPCLLPACGNIAALMHGKAAHCFSLRRGIST-DVYVGSA 426
Query: 249 LIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLK 308
LID YAKCG I ++ F+ I KNLV W ++I+G+AMHG KEA+E F MQ+ G K
Sbjct: 427 LIDMYAKCGRIQASRICFDGIPT--KNLVCWNAVIAGYAMHGKAKEAMEIFDLMQRSGQK 484
Query: 309 PNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEK 368
P+ ++F VL+ACS GL EEG +F+ M + + ++HY C++ +L RAG+LEQA
Sbjct: 485 PDIISFTCVLSACSQSGLTEEGSYYFNSMSSKYGIEARVEHYACMVTLLSRAGKLEQAYA 544
Query: 369 TALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVG 428
+P D VW LL +C H NV +GE K+ E+E G+Y+L+ NI A G
Sbjct: 545 MIRRMPVN-PDACVWGALLSSCRVHNNVSLGEVAAEKLFELEPSNPGNYILLSNIYASKG 603
Query: 429 RFGDAERLRRVMDERNAFKVPGCSLV 454
+ + R+R +M + K PGCS +
Sbjct: 604 MWNEVNRVRDMMKNKGLRKNPGCSWI 629
Score = 157 bits (397), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 127/449 (28%), Positives = 202/449 (44%), Gaps = 76/449 (16%)
Query: 14 TTQIHSHLLTTNSLLHHSQLFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFD 73
T Q H+H+L T L + + L LL Y+ A L+ + + S S L F
Sbjct: 32 TRQAHAHILKTG-LFNDTHLATKLLSHYANNMCFADATLVLDLVPEPNVFSFSTLIYAFS 90
Query: 74 SF--------TYSFL---------------IRTCATLSHPNLGTQLHAVISKVGFQSHVY 110
F T+S + ++ CA LS Q+H + S GF S +
Sbjct: 91 KFHQFHHALSTFSQMLTRGLMPDNRVLPSAVKACAGLSALKPARQVHGIASVSGFDSDSF 150
Query: 111 VNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCR- 169
V ++LV+MY+ ++D+ ++FD M E ++V+W+ ++ + G ++ A+ LF EM
Sbjct: 151 VQSSLVHMYIKCNQIRDAHRVFDRMFEPDVVSWSALVAAYARQGCVDEAKRLFSEMGDSG 210
Query: 170 ---NVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSC 226
N++SW G+I G+ +EA+ +F M + EP TI +VLPA+ D+
Sbjct: 211 VQPNLISWNGMIAGFNHSGLYSEAVLMFLDMHLRGF-EPDGTTISSVLPAVGDLEDLVMG 269
Query: 227 QLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDIS---------------- 270
LIHGY K+G + D V + LID Y KC C S++F+ +
Sbjct: 270 ILIHGYVIKQGLVS-DKCVSSALIDMYGKCSCTSEMSQVFDQMDHMDVGSCNAFIFGLSR 328
Query: 271 ---VERK--------------NLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVT 313
VE N+VSWTS+I+ + +G EA+E F MQ G+KPN VT
Sbjct: 329 NGQVESSLRLFRQLKDQGMELNVVSWTSMIACCSQNGRDIEALELFREMQIAGVKPNSVT 388
Query: 314 FLSVLNACSHGGLVEEGLNFFDKMVEECEVL-----PDIKHYGCLIDMLGRAGRLEQAEK 368
+L AC + + G C L D+ LIDM + GR++ +
Sbjct: 389 IPCLLPACGNIAALMHG------KAAHCFSLRRGISTDVYVGSALIDMYAKCGRIQASRI 442
Query: 369 TALGIPSEITDVVVWRTLLGACSFHGNVE 397
GIP++ ++V W ++ + HG +
Sbjct: 443 CFDGIPTK--NLVCWNAVIAGYAMHGKAK 469
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 119/270 (44%), Gaps = 41/270 (15%)
Query: 71 LFDSFTYSF---LIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKD 127
L DS ++ L T A+LS Q HA I K G + ++ T L++ Y + D
Sbjct: 10 LLDSVQHTIFNCLNSTTASLSQTR---QAHAHILKTGLFNDTHLATKLLSHYANNMCFAD 66
Query: 128 SSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRS 187
++ + D +PE N+ +++ +I K+ + A S F +M R ++ ++
Sbjct: 67 ATLVLDLVPEPNVFSFSTLIYAFSKFHQFHHALSTFSQMLTRGLMPDNRVL--------- 117
Query: 188 NEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLN 247
PS + A L A+ K + +HG GF + D V +
Sbjct: 118 -----------------PSAVKACAGLSAL------KPARQVHGIASVSGFDS-DSFVQS 153
Query: 248 CLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGL 307
L+ Y KC I A ++F+ + ++VSW+++++ +A G EA F M G+
Sbjct: 154 SLVHMYIKCNQIRDAHRVFDRMF--EPDVVSWSALVAAYARQGCVDEAKRLFSEMGDSGV 211
Query: 308 KPNRVTFLSVLNACSHGGLVEEGLNFFDKM 337
+PN +++ ++ +H GL E + F M
Sbjct: 212 QPNLISWNGMIAGFNHSGLYSEAVLMFLDM 241
>gi|449453744|ref|XP_004144616.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449511814|ref|XP_004164061.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 681
Score = 242 bits (617), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 146/443 (32%), Positives = 225/443 (50%), Gaps = 65/443 (14%)
Query: 73 DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLF 132
DSFT +++ CA L G Q+H ++ K+GF +V ++LV+MY G ++ K+F
Sbjct: 113 DSFTLPCVLKGCARLGALQEGKQIHGLVLKIGFGVDKFVLSSLVSMYSKCGEIELCRKVF 172
Query: 133 D-------------------------------EMPERNLVTWNVMITGLVKWGELEFARS 161
D EMPE++ +W ++I GL K G+LE AR
Sbjct: 173 DRMEDKDVVSWNSLIDGYARCGEIELALEMFEEMPEKDSFSWTILIDGLSKSGKLEAARD 232
Query: 162 LFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKM------------------------ 197
+F+ MP RN VSW +I+GY + SN A LF +M
Sbjct: 233 VFDRMPIRNSVSWNAMINGYMKAGDSNTAKELFDQMPERSLVTWNSMITGYERNKQFTKA 292
Query: 198 ------VACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLID 251
+ E P+ TIL + A + + + +H Y K GF D + LI+
Sbjct: 293 LKLFEVMLREDISPNYTTILGAVSAASGMVSLGTGRWVHSYIVKSGFKT-DGVLGTLLIE 351
Query: 252 TYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNR 311
Y+KCG + SA ++F S+ +K L WTS+I G MHG+ ++ +E F M + GLKP+
Sbjct: 352 MYSKCGSVKSALRVFR--SIPKKKLGHWTSVIVGLGMHGLVEQTLELFDEMCRTGLKPHA 409
Query: 312 VTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTAL 371
+TF+ VLNACSH G E+ +F M + + P I+HYGCLID+L RAG LE+A+ T
Sbjct: 410 ITFIGVLNACSHAGFAEDAHRYFKMMTYDYGIKPSIEHYGCLIDVLCRAGHLEEAKDTIE 469
Query: 372 GIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFG 431
+P + + V+W +LL HGN+ MGE + ++++ G YV++ N+ A G +
Sbjct: 470 RMPIK-ANKVIWTSLLSGSRKHGNIRMGEYAAQHLIDLAPDTTGCYVILSNMYAAAGLWE 528
Query: 432 DAERLRRVMDERNAFKVPGCSLV 454
++R +M ++ K PGCS +
Sbjct: 529 KVRQVREMMKKKGMKKDPGCSSI 551
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 91/332 (27%), Positives = 150/332 (45%), Gaps = 54/332 (16%)
Query: 57 LQQIYTHSHSP-LPPLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTAL 115
L +HS P LPP F ++ C T N QLHA+ K +H V++ L
Sbjct: 2 LSPTLSHSLQPFLPP-----NLHFPLQNCGTEREAN---QLHALSIKTASLNHPSVSSRL 53
Query: 116 VNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWT 175
+ +Y P N L++A SLF+ + +VSW
Sbjct: 54 LALYAD--------------PRIN---------------NLQYAHSLFDWIQEPTLVSWN 84
Query: 176 GIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEK 235
+I Y RSN+A+ALF K++ C++ P T+ VL + G ++ + IHG K
Sbjct: 85 LLIKCYIENQRSNDAIALFCKLL-CDFV-PDSFTLPCVLKGCARLGALQEGKQIHGLVLK 142
Query: 236 RGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEA 295
GF D VL+ L+ Y+KCG I K+F+ +E K++VSW S+I G+A G + A
Sbjct: 143 IGF-GVDKFVLSSLVSMYSKCGEIELCRKVFD--RMEDKDVVSWNSLIDGYARCGEIELA 199
Query: 296 VENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLID 355
+E F M + + ++ +++ S G +E + FD+M V + +I+
Sbjct: 200 LEMFEEMP----EKDSFSWTILIDGLSKSGKLEAARDVFDRMPIRNSV-----SWNAMIN 250
Query: 356 MLGRAGRLEQAEKTALGIPSEITDVVVWRTLL 387
+AG A++ +P +V W +++
Sbjct: 251 GYMKAGDSNTAKELFDQMPER--SLVTWNSMI 280
>gi|347954526|gb|AEP33763.1| organelle transcript processing 82, partial [Isatis tinctoria]
Length = 671
Score = 242 bits (617), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 142/424 (33%), Positives = 236/424 (55%), Gaps = 48/424 (11%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+N ++ Y+ ++A L++++ ++ D TY ++ CA LG
Sbjct: 164 WNAMISGYAETGCYKEALELFEEMMKMNVRP--------DESTYVTVLSACAHSGSIELG 215
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
Q+H+ + GF S++ + AL+++Y K
Sbjct: 216 RQVHSWVDDHGFDSNLKIVNALIDLYS-------------------------------KC 244
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
GE+E A LF+ + ++V+SW +I GYT MN EAL LF++M+ T P+++T+L+V
Sbjct: 245 GEVETACGLFQGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGET-PNDVTMLSV 303
Query: 214 LPAIWQNGDVKSCQLIHGYGEKR--GFT-AFDIRVLNCLIDTYAKCGCIFSASKLFEDIS 270
LPA G + + IH Y +KR G T A +R LID YAKCG I +A ++F S
Sbjct: 304 LPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRT--SLIDMYAKCGDIEAAHQVFN--S 359
Query: 271 VERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEG 330
+ K+L SW ++I GFAMHG + + F RM+K+G++P+ +TF+ +L+ACSH G+++ G
Sbjct: 360 MLHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIEPDDITFVGLLSACSHSGMLDLG 419
Query: 331 LNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGAC 390
+ F M ++ ++ P ++HYGC+ID+LG +G ++AE+ + E D V+W +LL AC
Sbjct: 420 RHIFRSMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINTMEME-PDGVIWCSLLKAC 478
Query: 391 SFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPG 450
HGNVE+ E + ++++E Y+L+ NI A GR+ D R+R +++ + KVPG
Sbjct: 479 KMHGNVELAESFAQNLIKIEPENPSSYILLSNIYASAGRWEDVARIRALLNGKCMKKVPG 538
Query: 451 CSLV 454
CS +
Sbjct: 539 CSSI 542
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 138/464 (29%), Positives = 232/464 (50%), Gaps = 61/464 (13%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNL 92
++NT++ ++L+ P + LY + L L +S+T+ FL+++CA
Sbjct: 31 IWNTMIRGHALSSDPVSSLTLYVCMVS--------LGLLPNSYTFPFLLKSCAKSKTFTE 82
Query: 93 GTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVK 152
G Q+H + K+GF +YV+T+L++MYV L+D+ K+FD R++V++ +ITG
Sbjct: 83 GQQIHGQVLKLGFDLDLYVHTSLISMYVQNWRLEDAYKVFDRSSHRDVVSYTALITGYAS 142
Query: 153 WGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILA 212
G++ A+ LF+E+P ++VVSW +I GY EAL LF +M+ P E T +
Sbjct: 143 RGDIRSAQKLFDEIPVKDVVSWNAMISGYAETGCYKEALELFEEMMKMN-VRPDESTYVT 201
Query: 213 VLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVE 272
VL A +G ++ + +H + + GF + +++++N LID Y+KCG + +A LF+ +S
Sbjct: 202 VLSACAHSGSIELGRQVHSWVDDHGFDS-NLKIVNALIDLYSKCGEVETACGLFQGLSY- 259
Query: 273 RKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGL- 331
K+++SW ++I G+ + KEA+ F M + G PN VT LSVL AC+H G ++ G
Sbjct: 260 -KDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSVLPACAHLGAIDIGRW 318
Query: 332 --NFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKT-------------------- 369
+ DK ++ ++ LIDM + G +E A +
Sbjct: 319 IHVYIDKRLKGVTNASSLR--TSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIFGFA 376
Query: 370 ----------------ALGI-PSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERG 412
+GI P +IT V LL ACS G +++G + R + + +
Sbjct: 377 MHGRADASFDLFSRMRKIGIEPDDITFV----GLLSACSHSGMLDLGRHIFRSMTQDYKM 432
Query: 413 YGG--DYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
Y M ++L G F +AE + M E V CSL+
Sbjct: 433 TPKLEHYGCMIDLLGHSGLFKEAEEMINTM-EMEPDGVIWCSLL 475
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 69/145 (47%), Gaps = 5/145 (3%)
Query: 262 ASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNAC 321
A+ +FE +++ N + W ++I G A+ ++ + M +GL PN TF +L +C
Sbjct: 17 ATSVFE--TIQEPNQLIWNTMIRGHALSSDPVSSLTLYVCMVSLGLLPNSYTFPFLLKSC 74
Query: 322 SHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVV 381
+ EG ++++ L D+ + LI M + RLE A K + S DVV
Sbjct: 75 AKSKTFTEGQQIHGQVLKLGFDL-DLYVHTSLISMYVQNWRLEDAYK--VFDRSSHRDVV 131
Query: 382 VWRTLLGACSFHGNVEMGERVTRKI 406
+ L+ + G++ +++ +I
Sbjct: 132 SYTALITGYASRGDIRSAQKLFDEI 156
>gi|413953302|gb|AFW85951.1| hypothetical protein ZEAMMB73_518426 [Zea mays]
Length = 620
Score = 242 bits (617), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 148/452 (32%), Positives = 233/452 (51%), Gaps = 51/452 (11%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+NT+L Y++A A L+ ++ P+ D+ +++ L+ +
Sbjct: 137 WNTMLEAYAVAGRAGDACALFDRM------------PVRDAGSWNILLAMLVRSGSVDKA 184
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWN--------- 144
+L + + V T +V+ G + ++ LFD MPERN+V+WN
Sbjct: 185 RELFGRMP----ERDVMAWTTMVDGVARSGNVDEARLLFDSMPERNVVSWNAMISGYTRN 240
Query: 145 ----------------------VMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYT 182
+MITG ++ +L+ AR LF+EMP RNVV+WT +++GY
Sbjct: 241 HRLDEALDLFTKMPHRDIASCNIMITGFIQNKDLKRARKLFDEMPERNVVTWTTMMNGYL 300
Query: 183 RMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFD 242
+ +S +L LFR M+ P+++T L L A + + +H K F D
Sbjct: 301 KGKQSELSLGLFRGMLMSG-IRPNQVTFLGALDACSDLATLCEGKQVHQMICKTAFQ-VD 358
Query: 243 IRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRM 302
V + L++ YAKCG + A KLF D+S E K+L+SW II+ +A HG+G EA+ + +M
Sbjct: 359 TFVGSALMNVYAKCGEVGLARKLF-DLSRE-KDLISWNGIIAAYAHHGVGIEAIHLYEKM 416
Query: 303 QKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGR 362
Q G +PN VT++ +L+ACSH GLV+EGL F+ MV + + +HY CLID+ RAGR
Sbjct: 417 QGNGYRPNDVTYVVLLSACSHSGLVDEGLKIFESMVNDRSIAVRDEHYTCLIDLCSRAGR 476
Query: 363 LEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYN 422
L+ A++ + + VW LLG C+ HGN +G R +++ E G Y L+ N
Sbjct: 477 LDDAKRLIHYLKIKPASGSVWSALLGGCNAHGNESIGNLAARNLIQAEPDNAGTYTLLSN 536
Query: 423 ILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
I A G++ +A +R M+ R K PGCS +
Sbjct: 537 IYASAGKWKEAAEIRSEMNNRGLKKQPGCSWI 568
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 141/289 (48%), Gaps = 15/289 (5%)
Query: 106 QSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEE 165
Q +V ++ Y G D+ LFD MP R+ +WN+++ LV+ G ++ AR LF
Sbjct: 131 QRNVVSWNTMLEAYAVAGRAGDACALFDRMPVRDAGSWNILLAMLVRSGSVDKARELFGR 190
Query: 166 MPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKS 225
MP R+V++WT ++DG R +EA LF M E + ++ A++ +N +
Sbjct: 191 MPERDVMAWTTMVDGVARSGNVDEARLLFDSM-----PERNVVSWNAMISGYTRNHRLDE 245
Query: 226 CQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISG 285
+ R DI N +I + + + A KLF+++ +N+V+WT++++G
Sbjct: 246 ALDLFTKMPHR-----DIASCNIMITGFIQNKDLKRARKLFDEMP--ERNVVTWTTMMNG 298
Query: 286 FAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLP 345
+ + ++ F M G++PN+VTFL L+ACS + EG +M+ +
Sbjct: 299 YLKGKQSELSLGLFRGMLMSGIRPNQVTFLGALDACSDLATLCEGKQVH-QMICKTAFQV 357
Query: 346 DIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHG 394
D L+++ + G + A K L S D++ W ++ A + HG
Sbjct: 358 DTFVGSALMNVYAKCGEVGLARK--LFDLSREKDLISWNGIIAAYAHHG 404
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 102/191 (53%), Gaps = 13/191 (6%)
Query: 113 TALVNMYVSLGFLKDSSKLFDEM-PERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNV 171
TALV+ Y G L+D+ LFD RN+VTW +++G + G ++ A LF+ MP RNV
Sbjct: 75 TALVSAYARRGMLRDARSLFDRSDARRNVVTWTALLSGYARAGLVDEAEVLFQRMPQRNV 134
Query: 172 VSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHG 231
VSW +++ Y R+ +A ALF +M + IL L + ++G V + + G
Sbjct: 135 VSWNTMLEAYAVAGRAGDACALFDRM---PVRDAGSWNIL--LAMLVRSGSVDKARELFG 189
Query: 232 YGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGM 291
+R D+ ++D A+ G + A LF+ S+ +N+VSW ++ISG+ +
Sbjct: 190 RMPER-----DVMAWTTMVDGVARSGNVDEARLLFD--SMPERNVVSWNAMISGYTRNHR 242
Query: 292 GKEAVENFGRM 302
EA++ F +M
Sbjct: 243 LDEALDLFTKM 253
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 136/291 (46%), Gaps = 25/291 (8%)
Query: 98 AVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELE 157
A + VG + N +V++ + G + D+ KLFD PER++V+W +++ + G L
Sbjct: 30 ATSAAVGLERAQDPNRLIVDL-AAAGRVWDARKLFDGTPERDVVSWTALVSAYARRGMLR 88
Query: 158 FARSLFEEMPC-RNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPA 216
ARSLF+ RNVV+WT ++ GY R +EA LF++M + S T+L
Sbjct: 89 DARSLFDRSDARRNVVTWTALLSGYARAGLVDEAEVLFQRMP--QRNVVSWNTMLEAYAV 146
Query: 217 IWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNL 276
+ GD +C L D N L+ + G + A +LF + +++
Sbjct: 147 AGRAGD--ACALFD------RMPVRDAGSWNILLAMLVRSGSVDKARELFG--RMPERDV 196
Query: 277 VSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDK 336
++WT+++ G A G EA F M + N V++ ++++ + ++E L+ F K
Sbjct: 197 MAWTTMVDGVARSGNVDEARLLFDSMP----ERNVVSWNAMISGYTRNHRLDEALDLFTK 252
Query: 337 MVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLL 387
M DI +I + L++A K +P +VV W T++
Sbjct: 253 MPHR-----DIASCNIMITGFIQNKDLKRARKLFDEMPER--NVVTWTTMM 296
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 96/195 (49%), Gaps = 24/195 (12%)
Query: 204 EPSEITI-LAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSA 262
+P+ + + LA +W + +L G E+ D+ L+ YA+ G + A
Sbjct: 42 DPNRLIVDLAAAGRVWD-----ARKLFDGTPER------DVVSWTALVSAYARRGMLRDA 90
Query: 263 SKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACS 322
LF D S R+N+V+WT+++SG+A G+ EA F RM + N V++ ++L A +
Sbjct: 91 RSLF-DRSDARRNVVTWTALLSGYARAGLVDEAEVLFQRMPQ----RNVVSWNTMLEAYA 145
Query: 323 HGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVV 382
G + FD+M + D + L+ ML R+G +++A + +P DV+
Sbjct: 146 VAGRAGDACALFDRMP-----VRDAGSWNILLAMLVRSGSVDKARELFGRMPER--DVMA 198
Query: 383 WRTLLGACSFHGNVE 397
W T++ + GNV+
Sbjct: 199 WTTMVDGVARSGNVD 213
>gi|347954494|gb|AEP33747.1| chloroplast biogenesis 19, partial [Brassica oleracea]
Length = 485
Score = 242 bits (617), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 135/365 (36%), Positives = 216/365 (59%), Gaps = 7/365 (1%)
Query: 92 LGTQLHAVISKVGF-QSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGL 150
G LH K+G ++ V V TA++ MY + + +FD + ++N VTWN MI G
Sbjct: 80 FGDSLHGYACKLGLDRNQVMVGTAILGMYSKRRRFRKARLVFDRVEDKNSVTWNTMIDGY 139
Query: 151 VKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITI 210
++ G ++ A +F+EMP R+++SWT +I+G+ + EALA FR+M +P + +
Sbjct: 140 MRSGRVDDAAKVFDEMPERDLISWTAMINGFVKKGLHEEALAWFREM-QVSGVKPDYVAV 198
Query: 211 LAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDIS 270
+A L A G + +H + + F ++RV N LID Y +CGC+ A ++F+++
Sbjct: 199 IAALAACANLGALSFGLWVHRFVVSQDFKN-NVRVSNSLIDLYCRCGCVEFARQVFDEM- 256
Query: 271 VERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEG 330
E++ +VSW S+I GFA +G E++ F RMQ+ KP+ VTF L ACSH GLVEEG
Sbjct: 257 -EKRTVVSWNSVIVGFAANGHAHESLVYFRRMQEERFKPDAVTFTGALTACSHVGLVEEG 315
Query: 331 LNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGAC 390
+ +F+ M + + P I+HYGCL+D+ RAGRLE+A K +P + +VV+ +LL AC
Sbjct: 316 VRYFEAMKRDYRISPRIEHYGCLVDLYSRAGRLEEALKVVESMPMKPNEVVIG-SLLAAC 374
Query: 391 SFHGN-VEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVP 449
HGN E+ ER+ +++ E++ +YV++ N+ A G++ A ++RR M K P
Sbjct: 375 RTHGNDTELAERMMKRLSELKVKGHSNYVILSNMYAADGQWEGASKMRRKMKGLGLKKQP 434
Query: 450 GCSLV 454
G S +
Sbjct: 435 GFSSI 439
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 92/218 (42%), Gaps = 44/218 (20%)
Query: 91 NLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGL 150
+ G +H + F+++V V+ +L+++Y G ++ + ++FDEM +R +V+WN +I G
Sbjct: 212 SFGLWVHRFVVSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFDEMEKRTVVSWNSVIVGF 271
Query: 151 VKWG----ELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPS 206
G L + R + EE + V++TG + + + E + F M
Sbjct: 272 AANGHAHESLVYFRRMQEERFKPDAVTFTGALTACSHVGLVEEGVRYFEAM--------- 322
Query: 207 EITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLF 266
D + I YG CL+D Y++ G + A K+
Sbjct: 323 -------------KRDYRISPRIEHYG--------------CLVDLYSRAGRLEEALKVV 355
Query: 267 EDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQK 304
E + + + N V S+++ HG E E RM K
Sbjct: 356 ESMPM-KPNEVVIGSLLAACRTHGNDTELAE---RMMK 389
Score = 43.1 bits (100), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 63/145 (43%), Gaps = 41/145 (28%)
Query: 277 VSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACS---------HGGLV 327
VSWTS I+ + +G EA + F M+ G++PN +T +++L+ C+ HG
Sbjct: 30 VSWTSRITLLSRNGRLAEAAKEFTAMRLAGVEPNHITLIALLSGCADCEPFGDSLHGYAC 89
Query: 328 EEGLN-------------------------FFDKMVEECEVLPDIKHYGCLIDMLGRAGR 362
+ GL+ FD++ ++ V + +ID R+GR
Sbjct: 90 KLGLDRNQVMVGTAILGMYSKRRRFRKARLVFDRVEDKNSVT-----WNTMIDGYMRSGR 144
Query: 363 LEQAEKTALGIPSEITDVVVWRTLL 387
++ A K +P D++ W ++
Sbjct: 145 VDDAAKVFDEMPER--DLISWTAMI 167
>gi|357438957|ref|XP_003589755.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355478803|gb|AES60006.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 891
Score = 242 bits (617), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 128/342 (37%), Positives = 198/342 (57%), Gaps = 2/342 (0%)
Query: 113 TALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVV 172
A++ Y G ++ KLF+ MPER++ +WN M+TG ++ G+L A LF MP +NV+
Sbjct: 236 NAMIAGYAQNGRFDEALKLFERMPERDMPSWNTMVTGFIQNGDLNRAEQLFHAMPQKNVI 295
Query: 173 SWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGY 232
+WT ++ GY + S EAL LF KM A + +P+ T + VL A + Q IH
Sbjct: 296 TWTAMMTGYVQHGLSEEALKLFNKMQANDGLKPTTGTFVTVLGACSDLAGLPEGQQIHQM 355
Query: 233 GEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMG 292
K F V++ LI+ Y+KCG A K+F+D +L++W +I+ +A HG G
Sbjct: 356 ISKTVFQE-STYVVSALINMYSKCGDFHVAKKMFDDGLSGHMDLIAWNGMIAAYAHHGYG 414
Query: 293 KEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGC 352
EA+ F +MQ++G + N VT++ +L ACSH GL +EG +FD++++ + HY C
Sbjct: 415 NEAINLFNKMQELGFQANDVTYVGLLTACSHAGLFDEGFKYFDELLKNRYIQVREDHYTC 474
Query: 353 LIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERG 412
LID+ GRAGRL++A G+ E++ + +W LL CS HGN ++G+ V K+L+ME
Sbjct: 475 LIDLCGRAGRLDEALNIIEGLGKEVS-LSLWGALLAGCSVHGNADIGKLVADKVLKMEPE 533
Query: 413 YGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
Y+L N+ A VG +A +R M ++ K PGCS +
Sbjct: 534 NADTYLLASNMYASVGMREEAANVRMKMKKKGLKKQPGCSWI 575
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 89/316 (28%), Positives = 155/316 (49%), Gaps = 35/316 (11%)
Query: 106 QSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEE 165
Q V V TA+V+ Y+ + ++++ +LF+EMP RN+V+WN MI G + G + A LF
Sbjct: 105 QKSVIVWTAMVSGYIKMNRIEEAERLFNEMPVRNVVSWNTMIDGYARNGRTQEALDLFGR 164
Query: 166 MPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKS 225
MP RNVVSW ++ R ++A LF +M E ++ ++ + +NG V +
Sbjct: 165 MPERNVVSWNTVMTALAHCGRIDDAERLFNEM-----RERDVVSWTTMVAGLSKNGRVDA 219
Query: 226 CQ----------------LIHGYGEKRGFTAF----------DIRVLNCLIDTYAKCGCI 259
+ +I GY + F D+ N ++ + + G +
Sbjct: 220 AREVFDKMPIRNVVSWNAMIAGYAQNGRFDEALKLFERMPERDMPSWNTMVTGFIQNGDL 279
Query: 260 FSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQ-KVGLKPNRVTFLSVL 318
A +LF ++ +KN+++WT++++G+ HG+ +EA++ F +MQ GLKP TF++VL
Sbjct: 280 NRAEQLFH--AMPQKNVITWTAMMTGYVQHGLSEEALKLFNKMQANDGLKPTTGTFVTVL 337
Query: 319 NACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEIT 378
ACS + EG +M+ + LI+M + G A+K S
Sbjct: 338 GACSDLAGLPEGQQIH-QMISKTVFQESTYVVSALINMYSKCGDFHVAKKMFDDGLSGHM 396
Query: 379 DVVVWRTLLGACSFHG 394
D++ W ++ A + HG
Sbjct: 397 DLIAWNGMIAAYAHHG 412
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/301 (23%), Positives = 132/301 (43%), Gaps = 56/301 (18%)
Query: 144 NVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYT 203
N I+ L + G++ AR +F+EM R+ WT +I GY + NEA LF + A +
Sbjct: 49 NYFISKLCREGKVNEARKVFDEMSKRDSCLWTTMISGYIKCGLINEARKLFDRPDAQK-- 106
Query: 204 EPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSAS 263
+ V ++ Y K I A
Sbjct: 107 --------------------------------------SVIVWTAMVSGYIKMNRIEEAE 128
Query: 264 KLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSH 323
+LF ++ V +N+VSW ++I G+A +G +EA++ FGRM + N V++ +V+ A +H
Sbjct: 129 RLFNEMPV--RNVVSWNTMIDGYARNGRTQEALDLFGRMP----ERNVVSWNTVMTALAH 182
Query: 324 GGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVW 383
G +++ F++M E D+ + ++ L + GR++ A + +P I +VV W
Sbjct: 183 CGRIDDAERLFNEMRER-----DVVSWTTMVAGLSKNGRVDAAREVFDKMP--IRNVVSW 235
Query: 384 RTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDER 443
++ + +G + ++ ++ E + + M G AE+L M ++
Sbjct: 236 NAMIAGYAQNGRFDEALKLFERMPERDM---PSWNTMVTGFIQNGDLNRAEQLFHAMPQK 292
Query: 444 N 444
N
Sbjct: 293 N 293
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 74/301 (24%), Positives = 124/301 (41%), Gaps = 71/301 (23%)
Query: 48 QKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQS 107
++A L+ ++Q ++ L P +F ++ C+ L+ G Q+H +ISK FQ
Sbjct: 311 EEALKLFNKMQ-----ANDGLKPTTGTFVT--VLGACSDLAGLPEGQQIHQMISKTVFQE 363
Query: 108 HVYVNTALVNMYVSLGFLKDSSKLFDE--MPERNLVTWNVMITGLVKWGELEFARSLFEE 165
YV +AL+NMY G + K+FD+ +L+ WN
Sbjct: 364 STYVVSALINMYSKCGDFHVAKKMFDDGLSGHMDLIAWN--------------------- 402
Query: 166 MPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKS 225
G+I Y NEA+ LF KM + + +++T + +L A
Sbjct: 403 ----------GMIAAYAHHGYGNEAINLFNKMQELGF-QANDVTYVGLLTA--------- 442
Query: 226 CQLIHGYGEKRGFTAFDIRVLN-----------CLIDTYAKCGCIFSASKLFEDISVERK 274
C + E GF FD + N CLID + G + A + E + E
Sbjct: 443 CSHAGLFDE--GFKYFDELLKNRYIQVREDHYTCLIDLCGRAGRLDEALNIIEGLGKE-V 499
Query: 275 NLVSWTSIISGFAMHG---MGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGL 331
+L W ++++G ++HG +GK + +M+ N T+L N + G+ EE
Sbjct: 500 SLSLWGALLAGCSVHGNADIGKLVADKVLKME----PENADTYLLASNMYASVGMREEAA 555
Query: 332 N 332
N
Sbjct: 556 N 556
>gi|147798405|emb|CAN70142.1| hypothetical protein VITISV_032085 [Vitis vinifera]
Length = 748
Score = 242 bits (617), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 127/309 (41%), Positives = 189/309 (61%), Gaps = 4/309 (1%)
Query: 139 NLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMV 198
NL N +I K G+L+ AR LFE + ++++SW +I GY+ MN EALALFRKM
Sbjct: 298 NLRLVNALIDMYSKCGDLDKARDLFEGICEKDIISWNVMIGGYSHMNSYKEALALFRKMQ 357
Query: 199 ACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGC 258
EP+++T +++LPA G + + IH Y +K+ + + LID YAKCG
Sbjct: 358 QSN-VEPNDVTFVSILPACAYLGALDLGKWIHAYIDKKFLGLTNTSLWTSLIDMYAKCGN 416
Query: 259 IFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVL 318
I +A ++F ++ K+L SW ++ISG AMHG A+E F +M+ G +P+ +TF+ VL
Sbjct: 417 IEAAKQVFA--GMKPKSLGSWNAMISGLAMHGHANMALELFRQMRDEGFEPDDITFVGVL 474
Query: 319 NACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEIT 378
+ACSH GLVE G F MVE+ ++ P ++HYGC+ID+LGRAG ++AE + +
Sbjct: 475 SACSHAGLVELGRQCFSSMVEDYDISPKLQHYGCMIDLLGRAGLFDEAEALMKNMEMK-P 533
Query: 379 DVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRR 438
D +W +LLGAC HGNVE+GE + + E+E G YVL+ NI A GR+ D R+R
Sbjct: 534 DGAIWGSLLGACRVHGNVELGEFAAKHLFELEPENPGAYVLLSNIYATAGRWDDVARIRT 593
Query: 439 VMDERNAFK 447
++++ K
Sbjct: 594 KLNDKGMKK 602
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 123/406 (30%), Positives = 216/406 (53%), Gaps = 16/406 (3%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNL 92
++NT++ SL+ SP A Y ++ +S+T+ FL+++CA +
Sbjct: 99 IWNTMIRGNSLSSSPVGAIDFYVRMLLCGVEP--------NSYTFPFLLKSCAKVGATQE 150
Query: 93 GTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVK 152
G Q+H + K+G +S +V+T+L+NMY G L + +F + R+ V++ +ITG
Sbjct: 151 GKQIHGHVLKLGLESDPFVHTSLINMYAQNGELGYAELVFSKSSLRDAVSFTALITGYTL 210
Query: 153 WGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILA 212
G L+ AR LFEE+P R+ VSW +I GY + R EALA F++M P+E T++
Sbjct: 211 RGCLDDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRAN-VAPNESTMVT 269
Query: 213 VLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVE 272
VL A Q+G ++ + + E G + ++R++N LID Y+KCG + A LFE I
Sbjct: 270 VLSACAQSGSLELGNWVRSWIEDHGLGS-NLRLVNALIDMYSKCGDLDKARDLFEGIC-- 326
Query: 273 RKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLN 332
K+++SW +I G++ KEA+ F +MQ+ ++PN VTF+S+L AC++ G ++ G
Sbjct: 327 EKDIISWNVMIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKW 386
Query: 333 FFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSF 392
+ ++ L + + LIDM + G +E A++ G+ + + W ++ +
Sbjct: 387 IHAYIDKKFLGLTNTSLWTSLIDMYAKCGNIEAAKQVFAGMKPK--SLGSWNAMISGLAM 444
Query: 393 HGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRR 438
HG+ M + R++ + G+ D + +L+ G E R+
Sbjct: 445 HGHANMALELFRQM--RDEGFEPDDITFVGVLSACSHAGLVELGRQ 488
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 84/334 (25%), Positives = 155/334 (46%), Gaps = 22/334 (6%)
Query: 80 LIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYV--SLGFLKDSSKLFDEMPE 137
L+ TC + NL Q+H+ I K G + + + L+ G L + LF+ + +
Sbjct: 38 LLSTCKSFQ--NL-KQIHSQIIKTGLHNTQFALSKLIEFCAISPFGNLSYALLLFESIEQ 94
Query: 138 RNLVTWNVMITG----LVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALAL 193
N WN MI G G ++F + N ++ ++ ++ + E +
Sbjct: 95 PNQFIWNTMIRGNSLSSSPVGAIDFYVRMLLCGVEPNSYTFPFLLKSCAKVGATQEGKQI 154
Query: 194 FRKMVACEY-TEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDT 252
++ ++P T L + A QNG++ +L+ R +F LI
Sbjct: 155 HGHVLKLGLESDPFVHTSLINMYA--QNGELGYAELVFSKSSLRDAVSF-----TALITG 207
Query: 253 YAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRV 312
Y GC+ A +LFE+I V ++ VSW ++I+G+A G +EA+ F M++ + PN
Sbjct: 208 YTLRGCLDDARRLFEEIPV--RDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNES 265
Query: 313 TFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALG 372
T ++VL+AC+ G +E G N+ +E+ + +++ LIDM + G L++A G
Sbjct: 266 TMVTVLSACAQSGSLELG-NWVRSWIEDHGLGSNLRLVNALIDMYSKCGDLDKARDLFEG 324
Query: 373 IPSEITDVVVWRTLLGACSFHGNVEMGERVTRKI 406
I + D++ W ++G S + + + RK+
Sbjct: 325 ICEK--DIISWNVMIGGYSHMNSYKEALALFRKM 356
>gi|449462338|ref|XP_004148898.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Cucumis sativus]
Length = 675
Score = 241 bits (616), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 144/375 (38%), Positives = 215/375 (57%), Gaps = 3/375 (0%)
Query: 80 LIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERN 139
L+ C+ +G LH I + + + A+++MYV G L + ++F+ M R+
Sbjct: 259 LLSACSQKGDSEMGKTLHEHIRRKDITCSLNLLNAMLDMYVKCGCLTTAREIFNNMERRD 318
Query: 140 LVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVA 199
+ +W ++ G K G+L AR LF+EMP RN+VSW +I GY++ ++ EAL LF MV
Sbjct: 319 VFSWTSLLNGYAKNGDLGSARKLFDEMPERNIVSWNAMIAGYSQNSQPMEALELFHNMVD 378
Query: 200 CEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCI 259
P+E T++ VL A Q G ++ Q IH + + + N ++D YAKCG I
Sbjct: 379 VVGLVPTEDTLVCVLSASGQLGCLEMGQEIHCNHVNKIGIQVSLILKNAVMDMYAKCGSI 438
Query: 260 FSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLN 319
+A+KLF S+ KNLVSW S+IS +A +G K+A+ F +M GLKP+ +TF+ VL+
Sbjct: 439 DAAAKLFH--SMPEKNLVSWNSMISAYASYGHAKKALTLFDQMIGSGLKPDHITFIGVLS 496
Query: 320 ACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITD 379
ACS+GG V EG F+ M V P +HY C++D+L R G L++A + +P E ++
Sbjct: 497 ACSYGGFVSEGQAHFESMENCFGVEPKREHYACMVDLLSRVGLLKEAYELISRMPMEASE 556
Query: 380 VVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRV 439
W LL AC HGNVEM + K+LE++ G Y L+ NI A ++ D +RR+
Sbjct: 557 -GGWGALLDACRKHGNVEMAKLAGEKLLELDPEDSGIYSLLANICADGKKWKDVRMVRRM 615
Query: 440 MDERNAFKVPGCSLV 454
M ER KVPG SL+
Sbjct: 616 MRERGVKKVPGHSLI 630
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 104/410 (25%), Positives = 190/410 (46%), Gaps = 73/410 (17%)
Query: 18 HSHLLTTNSLLHHSQLFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTY 77
++HL+ + L + +NT++ Y A P F ++Q+ + FDS ++
Sbjct: 104 YAHLIFDQTELPNCFFWNTMIKGYCKANHPSMGFSFFRQMIRNRAE--------FDSGSF 155
Query: 78 SFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPE 137
F ++ C + +G +H+VI K GF S ++V L+ YV G L + ++FDE
Sbjct: 156 VFALKACGQFAEKIVGMAVHSVIWKRGFDSDLFVQNGLIQNYVETGCLGFARQMFDESSV 215
Query: 138 RNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKM 197
+++VTW MI +GY R N +EA+ALF M
Sbjct: 216 KDVVTWTTMI-------------------------------NGYARNNWLDEAIALFNSM 244
Query: 198 VACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCG 257
++ + +P+E+T++A+L A Q GD + + +H + ++ T + +LN ++D Y KCG
Sbjct: 245 LSSD-VKPNEVTMIALLSACSQKGDSEMGKTLHEHIRRKDITC-SLNLLNAMLDMYVKCG 302
Query: 258 CIFSASKLFE---------------------DISVERK--------NLVSWTSIISGFAM 288
C+ +A ++F D+ RK N+VSW ++I+G++
Sbjct: 303 CLTTAREIFNNMERRDVFSWTSLLNGYAKNGDLGSARKLFDEMPERNIVSWNAMIAGYSQ 362
Query: 289 HGMGKEAVENFGRM-QKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDI 347
+ EA+E F M VGL P T + VL+A G +E G V + + +
Sbjct: 363 NSQPMEALELFHNMVDVVGLVPTEDTLVCVLSASGQLGCLEMGQEIHCNHVNKIGIQVSL 422
Query: 348 KHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVE 397
++DM + G ++ A K +P + ++V W +++ A + +G+ +
Sbjct: 423 ILKNAVMDMYAKCGSIDAAAKLFHSMPEK--NLVSWNSMISAYASYGHAK 470
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 75/268 (27%), Positives = 129/268 (48%), Gaps = 15/268 (5%)
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
G++ +A +F++ N W +I GY + N + + FR+M+ E + +
Sbjct: 100 GDIHYAHLIFDQTELPNCFFWNTMIKGYCKANHPSMGFSFFRQMIR-NRAEFDSGSFVFA 158
Query: 214 LPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVER 273
L A Q + +H KRGF + D+ V N LI Y + GC+ A ++F++ SV
Sbjct: 159 LKACGQFAEKIVGMAVHSVIWKRGFDS-DLFVQNGLIQNYVETGCLGFARQMFDESSV-- 215
Query: 274 KNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNF 333
K++V+WT++I+G+A + EA+ F M +KPN VT +++L+ACS G E G
Sbjct: 216 KDVVTWTTMINGYARNNWLDEAIALFNSMLSSDVKPNEVTMIALLSACSQKGDSEMGKTL 275
Query: 334 FDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFH 393
+ + + ++ + ++DM + G L A + + E DV W +LL + +
Sbjct: 276 HEHIRRK-DITCSLNLLNAMLDMYVKCGCLTTAREIFNNM--ERRDVFSWTSLLNGYAKN 332
Query: 394 GNV--------EMGERVTRKILEMERGY 413
G++ EM ER M GY
Sbjct: 333 GDLGSARKLFDEMPERNIVSWNAMIAGY 360
>gi|413918370|gb|AFW58302.1| hypothetical protein ZEAMMB73_070872 [Zea mays]
Length = 688
Score = 241 bits (616), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 137/388 (35%), Positives = 216/388 (55%), Gaps = 10/388 (2%)
Query: 73 DSFTYSFLIRTCATLSHPNLGTQLHA-VISKVGFQSHVYVNTALVNMYVSLGFLKDSSKL 131
D T S ++ CA L+ G Q+HA ++ + + + +N ALV+MY G ++ +
Sbjct: 251 DEVTLSSVMSACAGLAAEREGRQVHAHMVKRDRLRDDMVLNNALVDMYAKCGRTWEARCI 310
Query: 132 FDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEAL 191
FD MP R++V+ ++ G K +E A+ +F +M +NV++W +I Y + EA+
Sbjct: 311 FDSMPSRSVVSETSILAGYAKSANVEDAQVVFSQMVEKNVIAWNVLIAAYAQNGEEEEAI 370
Query: 192 ALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGF-----TAFDIRVL 246
LF ++ + P+ T VL A ++ Q H + K GF D+ V
Sbjct: 371 RLFVQLKR-DSIWPTHYTYGNVLNACGNIAVLQLGQQAHVHVLKEGFRFDFGPESDVFVG 429
Query: 247 NCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVG 306
N L+D Y K G I +K+FE ++ ++ VSW ++I G+A +G K+A+ F RM
Sbjct: 430 NSLVDMYLKTGSIDDGAKVFERMAA--RDNVSWNAMIVGYAQNGRAKDALHLFERMLCSN 487
Query: 307 LKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQA 366
P+ VT + VL+AC H GLV+EG F M E+ + P HY C++D+LGRAG L++A
Sbjct: 488 ENPDSVTMIGVLSACGHSGLVDEGRRHFHFMTEDHGITPSRDHYTCMVDLLGRAGHLKEA 547
Query: 367 EKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAG 426
E+ +P+E D V+W +LLGAC H NVE+GER ++ E++ G YVL+ N+ A
Sbjct: 548 EELIKDMPTE-PDSVLWASLLGACRLHKNVELGERTAGRLFELDPENSGPYVLLSNMYAE 606
Query: 427 VGRFGDAERLRRVMDERNAFKVPGCSLV 454
+G++ D R+RR M +R K PGCS +
Sbjct: 607 MGKWADVFRVRRSMKDRGVSKQPGCSWI 634
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 91/346 (26%), Positives = 165/346 (47%), Gaps = 16/346 (4%)
Query: 97 HAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGEL 156
H + K ++ LV+ Y LG L+++ ++FD +P RN ++N +++ + G
Sbjct: 40 HGCVLKSPVAGETFLLNTLVSTYARLGRLREARRVFDGIPLRNTFSYNALLSAYARLGRP 99
Query: 157 EFARSLFEEMPCRNVVSWTGIIDGYTRMNR--SNEALALFRKMVACEYTEPSEITILAVL 214
+ AR+LFE +P + S+ ++ R R + +AL M A ++ + + + L
Sbjct: 100 DEARALFEAIPDPDQCSYNAVVAALARHGRGHAGDALRFLAAMHADDFV-LNAYSFASAL 158
Query: 215 PAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERK 274
A D+++ + +HG R A D+ + L+D YAKC A ++F+ ++ +
Sbjct: 159 SACAAEKDLRTGEQVHGL-VARSPHADDVHIGTALVDMYAKCERPVDARRVFD--AMPER 215
Query: 275 NLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFF 334
N+VSW S+I+ + +G EA+ F M G P+ VT SV++AC+ EG
Sbjct: 216 NVVSWNSLITCYEQNGPVGEALVLFVEMMATGFFPDEVTLSSVMSACAGLAAEREGRQVH 275
Query: 335 DKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHG 394
MV+ + D+ L+DM + GR +A +PS VV ++L +
Sbjct: 276 AHMVKRDRLRDDMVLNNALVDMYAKCGRTWEARCIFDSMPSR--SVVSETSILAGYAKSA 333
Query: 395 NVEMGERVTRKILEMERGYGGDYVLMYNIL-AGVGRFGDAERLRRV 439
NVE + V +++E V+ +N+L A + G+ E R+
Sbjct: 334 NVEDAQVVFSQMVEKN-------VIAWNVLIAAYAQNGEEEEAIRL 372
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 96/402 (23%), Positives = 176/402 (43%), Gaps = 70/402 (17%)
Query: 71 LFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSK 130
+ ++++++ + CA G Q+H ++++ V++ TALV+MY D+ +
Sbjct: 148 VLNAYSFASALSACAAEKDLRTGEQVHGLVARSPHADDVHIGTALVDMYAKCERPVDARR 207
Query: 131 LFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEA 190
+FD MPERN+V+WN +IT C Y + EA
Sbjct: 208 VFDAMPERNVVSWNSLIT-------------------C------------YEQNGPVGEA 236
Query: 191 LALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLI 250
L LF +M+A + P E+T+ +V+ A + + +H + KR D+ + N L+
Sbjct: 237 LVLFVEMMATGFF-PDEVTLSSVMSACAGLAAEREGRQVHAHMVKRDRLRDDMVLNNALV 295
Query: 251 DTYAKCG------CIFSA------------------SKLFEDISV-----ERKNLVSWTS 281
D YAKCG CIF + S ED V KN+++W
Sbjct: 296 DMYAKCGRTWEARCIFDSMPSRSVVSETSILAGYAKSANVEDAQVVFSQMVEKNVIAWNV 355
Query: 282 IISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEEC 341
+I+ +A +G +EA+ F ++++ + P T+ +VLNAC + +++ G +++E
Sbjct: 356 LIAAYAQNGEEEEAIRLFVQLKRDSIWPTHYTYGNVLNACGNIAVLQLGQQAHVHVLKEG 415
Query: 342 ---EVLP--DIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNV 396
+ P D+ L+DM + G ++ K + + D V W ++ + +G
Sbjct: 416 FRFDFGPESDVFVGNSLVDMYLKTGSIDDGAKVFERMAAR--DNVSWNAMIVGYAQNGRA 473
Query: 397 EMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRR 438
+ + ++L D V M +L+ G G + RR
Sbjct: 474 KDALHLFERMLCSNE--NPDSVTMIGVLSACGHSGLVDEGRR 513
>gi|242071929|ref|XP_002451241.1| hypothetical protein SORBIDRAFT_05g026370 [Sorghum bicolor]
gi|241937084|gb|EES10229.1| hypothetical protein SORBIDRAFT_05g026370 [Sorghum bicolor]
Length = 505
Score = 241 bits (616), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 143/427 (33%), Positives = 233/427 (54%), Gaps = 26/427 (6%)
Query: 35 NTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLGT 94
N + S + SP AF L L++ H+P D T+ L+ CA+ S P L +
Sbjct: 86 NAAVKALSASSSPDDAFRLLSTLRRF----HAP-----DRLTFLPLL-GCAS-SFPVL-S 133
Query: 95 QLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERN--LVTWNVMITGLVK 152
LH+++ ++GF SH + AL+ Y + LFD+MP++N V +N +IT +K
Sbjct: 134 ALHSLLLRLGFLSHHPITLALLKPYP----MPHVRALFDDMPQKNKCTVAYNTLITACLK 189
Query: 153 WGELEFARSLFEEMPCRNVVS-----WTGIIDGYTRMNRSNEALALFRKMVACEYTEPSE 207
++ AR LF+EM W II G R R + A+ F +MV P +
Sbjct: 190 ARDIRAARHLFDEMQRHRRSRRSVVSWNLIITGCARSGRDDMAVQCFERMVREGEVAPDD 249
Query: 208 ITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFE 267
T++AVLPA + G+ + + H Y +K G + V N ++D Y KCG + SA ++F
Sbjct: 250 GTLVAVLPACGKTGNAGAGRWAHEYAKKSGLLEGTVHVANAVMDMYCKCGDVDSAREVF- 308
Query: 268 DISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLV 327
++ ++++VSW ++I+GF+++G G E ++ F +M + G++PN VTFL+VL C+H G V
Sbjct: 309 -MTTPQRSVVSWNAMITGFSLNGHGVEGIDLFQKMMRHGVEPNAVTFLAVLGCCAHAGAV 367
Query: 328 EEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLL 387
+ G F MV E + P I+HYGC++D+ GR G LE+A G+P + + +W LL
Sbjct: 368 DIGREIFQSMVSEHGIEPAIEHYGCMVDLFGRCGLLEEAHALIQGMPMK-PNAAIWGALL 426
Query: 388 GACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFK 447
AC H + E ++++ +E G+YVL+ N+ A R+ +A +RR+M + K
Sbjct: 427 SACRAHAGLGTAEVALKELINLEPWNSGNYVLLANLYAETERWEEAGEVRRLMRRMSVNK 486
Query: 448 VPGCSLV 454
PG S++
Sbjct: 487 APGQSVM 493
>gi|297811673|ref|XP_002873720.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297319557|gb|EFH49979.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 623
Score = 241 bits (616), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 138/387 (35%), Positives = 223/387 (57%), Gaps = 11/387 (2%)
Query: 72 FDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKL 131
D + L CA L G Q H V K+GF + V V AL++MY GF+ + ++
Sbjct: 109 IDHVSLVCLFGVCAKLEDLRFGEQGHGVAVKMGFLTSVKVCNALMDMYGKCGFVSEVKRI 168
Query: 132 FDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEAL 191
F + E+++V+W V++ LVKW L+ R +F+EMP RNVV+WT ++ GY + E L
Sbjct: 169 FQALEEKSVVSWTVVLDTLVKWEGLKRGREVFDEMPERNVVAWTLMVAGYLGAGFTREVL 228
Query: 192 ALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGF------TAFDIRV 245
L +MV + +T+ ++L A Q+G++ + +H Y K+ T + V
Sbjct: 229 ELLAEMVFRCGHGLNFVTLCSMLSACAQSGNLVIGRWVHVYALKKAMMMGEEETYDGVMV 288
Query: 246 LNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKV 305
L+D YAKCG I S+ K+F + ++N+V+W ++ SG AMHG G+ ++ F M +
Sbjct: 289 GTALVDMYAKCGNIDSSIKVFR--LMRKRNVVTWNALFSGLAMHGKGRMVIDMFPEMVR- 345
Query: 306 GLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQ 365
+KP+ +TF ++L+ACSH G+V+EG F + + + P + HY C++D+LGRAGR+E+
Sbjct: 346 EVKPDDLTFTALLSACSHLGMVDEGWRCFHSL-QFYGLEPKVDHYACMVDILGRAGRIEE 404
Query: 366 AEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILA 425
AE +P +VV+ +LLG+CS HG +E+ ER+ R++++M G+ +LM N+
Sbjct: 405 AEILMREMPVPPNEVVLG-SLLGSCSVHGKLEIAERIKRELIQMSPGHTEYQILMSNMYV 463
Query: 426 GVGRFGDAERLRRVMDERNAFKVPGCS 452
GR A+ LR + R K+PG S
Sbjct: 464 AEGRSDIADGLRGSLRNRGIRKIPGLS 490
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 87/393 (22%), Positives = 157/393 (39%), Gaps = 78/393 (19%)
Query: 79 FLIRTCATLSHPNLGTQLHAVISKVGFQS--HVYVNTALVNMYVSLGFLKDSSKLFDEMP 136
L+R A S + G +LHAV++ G + Y++ AL Y S G + + KLFDE+P
Sbjct: 11 LLLRQSAHRSFLHPGRELHAVLTTSGLKKAPRSYLSNALFQFYASSGEIATAQKLFDEIP 70
Query: 137 --ERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALF 194
+++ V W +++ ++G L + LF EM + V
Sbjct: 71 LSDKDNVDWTTLLSSFSRFGLLVNSMKLFVEMRRKRV----------------------- 107
Query: 195 RKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYA 254
E ++++ + + D++ + HG K GF ++V N L+D Y
Sbjct: 108 ---------EIDHVSLVCLFGVCAKLEDLRFGEQGHGVAVKMGFLT-SVKVCNALMDMYG 157
Query: 255 KCGCIFSASKLFEDI-----------------------------SVERKNLVSWTSIISG 285
KCG + ++F+ + + +N+V+WT +++G
Sbjct: 158 KCGFVSEVKRIFQALEEKSVVSWTVVLDTLVKWEGLKRGREVFDEMPERNVVAWTLMVAG 217
Query: 286 FAMHGMGKEAVENFGRMQ-KVGLKPNRVTFLSVLNACSHGG--LVEEGLNFF----DKMV 338
+ G +E +E M + G N VT S+L+AC+ G ++ ++ + M+
Sbjct: 218 YLGAGFTREVLELLAEMVFRCGHGLNFVTLCSMLSACAQSGNLVIGRWVHVYALKKAMMM 277
Query: 339 EECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEM 398
E E + L+DM + G ++ + K + +VV W L + HG
Sbjct: 278 GEEETYDGVMVGTALVDMYAKCGNIDSSIKVFRLMRKR--NVVTWNALFSGLAMHGK--- 332
Query: 399 GERVTRKILEMERGYGGDYVLMYNILAGVGRFG 431
G V EM R D + +L+ G
Sbjct: 333 GRMVIDMFPEMVREVKPDDLTFTALLSACSHLG 365
>gi|212723118|ref|NP_001131685.1| hypothetical protein [Zea mays]
gi|194692242|gb|ACF80205.1| unknown [Zea mays]
gi|414879040|tpg|DAA56171.1| TPA: hypothetical protein ZEAMMB73_730680 [Zea mays]
Length = 590
Score = 241 bits (615), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 129/327 (39%), Positives = 193/327 (59%), Gaps = 5/327 (1%)
Query: 128 SSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRS 187
+ +LFD+MPER+LV WN MI G + G ++ ARSLFEEMP RNV+SW+ +IDG+ +
Sbjct: 233 ARELFDQMPERDLVCWNSMIDGYARHGRMDEARSLFEEMPERNVISWSIVIDGHVSCGEA 292
Query: 188 NEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLN 247
EAL F+ M+ C P I + + A Q G ++ + +H Y EK+ + D+ V
Sbjct: 293 KEALEYFQSMLRCGL-RPDRIAAVGAVSACAQLGALEQGRWLHSYLEKKKLLS-DVVVQT 350
Query: 248 CLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGL 307
LID Y KCGC+ A +FE S+ +++V+W +I G HG G +AV F RM+ +
Sbjct: 351 ALIDMYVKCGCLDLAMLIFE--SMAERSVVTWNVMIVGLGTHGFGLDAVTLFHRMEAESV 408
Query: 308 KPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAE 367
+ ++ L +L AC+H GLV EGL F +M ++ + P ++HYG L+D+LGRAGRL+QA
Sbjct: 409 AVDDLSVLGMLTACTHAGLVSEGLEIFHRMKKDFGIDPKVEHYGALVDLLGRAGRLDQAR 468
Query: 368 KTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGV 427
+P E T +W +LL AC H VE+ E ++ ++ G YVL+ NI A
Sbjct: 469 HAIETMPMEPTP-ELWGSLLAACRSHSCVELAELSVERLADLGADDSGVYVLLSNIYADE 527
Query: 428 GRFGDAERLRRVMDERNAFKVPGCSLV 454
G +GD R+R++M + K G S++
Sbjct: 528 GMWGDVLRIRKLMSDEGMRKDIGRSVI 554
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/121 (36%), Positives = 62/121 (51%), Gaps = 4/121 (3%)
Query: 81 IRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNL 140
+ CA L G LH+ + K S V V TAL++MYV G L + +F+ M ER++
Sbjct: 318 VSACAQLGALEQGRWLHSYLEKKKLLSDVVVQTALIDMYVKCGCLDLAMLIFESMAERSV 377
Query: 141 VTWNVMITGLVKWGELEFARSLFEEMPCRNV----VSWTGIIDGYTRMNRSNEALALFRK 196
VTWNVMI GL G A +LF M +V +S G++ T +E L +F +
Sbjct: 378 VTWNVMIVGLGTHGFGLDAVTLFHRMEAESVAVDDLSVLGMLTACTHAGLVSEGLEIFHR 437
Query: 197 M 197
M
Sbjct: 438 M 438
>gi|15221713|ref|NP_174428.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169458|sp|Q9C866.1|PPR65_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g31430
gi|12322531|gb|AAG51260.1|AC027135_1 PPR-repeat protein [Arabidopsis thaliana]
gi|332193234|gb|AEE31355.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 570
Score = 241 bits (615), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 137/385 (35%), Positives = 216/385 (56%), Gaps = 7/385 (1%)
Query: 72 FDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKL 131
FD T + C+ L + +G +++ + F+ V + ALV+M+ G L + +
Sbjct: 146 FDEGTIVSTLSACSALKNLEIGERIYRFVV-TEFEMSVRIGNALVDMFCKCGCLDKARAV 204
Query: 132 FDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEAL 191
FD M ++N+ W M+ G V G ++ AR LFE P ++VV WT +++GY + NR +EAL
Sbjct: 205 FDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEAL 264
Query: 192 ALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLID 251
LFR M P ++++L Q G ++ + IHGY + T D V L+D
Sbjct: 265 ELFRCMQTAG-IRPDNFVLVSLLTGCAQTGALEQGKWIHGYINENRVTV-DKVVGTALVD 322
Query: 252 TYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNR 311
YAKCGCI +A ++F +I + ++ SWTS+I G AM+GM A++ + M+ VG++ +
Sbjct: 323 MYAKCGCIETALEVFYEI--KERDTASWTSLIYGLAMNGMSGRALDLYYEMENVGVRLDA 380
Query: 312 VTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEK--T 369
+TF++VL AC+HGG V EG F M E V P +H CLID+L RAG L++AE+
Sbjct: 381 ITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEHCSCLIDLLCRAGLLDEAEELID 440
Query: 370 ALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGR 429
+ S+ T V V+ +LL A +GNV++ ERV K+ ++E + L+ ++ A R
Sbjct: 441 KMRGESDETLVPVYCSLLSAARNYGNVKIAERVAEKLEKVEVSDSSAHTLLASVYASANR 500
Query: 430 FGDAERLRRVMDERNAFKVPGCSLV 454
+ D +RR M + K PGCS +
Sbjct: 501 WEDVTNVRRKMKDLGIRKFPGCSSI 525
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 108/423 (25%), Positives = 182/423 (43%), Gaps = 88/423 (20%)
Query: 21 LLTTNSLLHHSQLFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFL 80
LL T SLL ++N +L + +S K L+ +L+ L P D+FT +
Sbjct: 5 LLQTPSLL----MYNKMLKSLADGKSFTKVLALFGELRG------QGLYP--DNFTLPVV 52
Query: 81 IRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNL 140
+++ L G ++H K G + YV+ +L+ MY SLG
Sbjct: 53 LKSIGRLRKVIEGEKVHGYAVKAGLEFDSYVSNSLMGMYASLG----------------- 95
Query: 141 VTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVAC 200
++E +F+EMP R+VVSW G+I Y R +A+ +F++M
Sbjct: 96 --------------KIEITHKVFDEMPQRDVVSWNGLISSYVGNGRFEDAIGVFKRMSQE 141
Query: 201 EYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFD--IRVLNCLIDTYAKCGC 258
+ E TI++ L A +++ + I+ + T F+ +R+ N L+D + KCGC
Sbjct: 142 SNLKFDEGTIVSTLSACSALKNLEIGERIYRF----VVTEFEMSVRIGNALVDMFCKCGC 197
Query: 259 IFSASKLFED----------------ISVER-------------KNLVSWTSIISGFAMH 289
+ A +F+ +S R K++V WT++++G+
Sbjct: 198 LDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQF 257
Query: 290 GMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKH 349
EA+E F MQ G++P+ +S+L C+ G +E+G + + E V D
Sbjct: 258 NRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQG-KWIHGYINENRVTVDKVV 316
Query: 350 YGCLIDMLGRAGRLEQAEKTALGIPSEIT--DVVVWRTLLGACSFHGNVEMGERVTRKIL 407
L+DM + G +E TAL + EI D W +L+ + +G M R
Sbjct: 317 GTALVDMYAKCGCIE----TALEVFYEIKERDTASWTSLIYGLAMNG---MSGRALDLYY 369
Query: 408 EME 410
EME
Sbjct: 370 EME 372
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 114/240 (47%), Gaps = 17/240 (7%)
Query: 205 PSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASK 264
P T+ VL +I + V + +HGY K G FD V N L+ YA G I K
Sbjct: 44 PDNFTLPVVLKSIGRLRKVIEGEKVHGYAVKAGLE-FDSYVSNSLMGMYASLGKIEITHK 102
Query: 265 LFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRM-QKVGLKPNRVTFLSVLNACSH 323
+F+++ ++++VSW +IS + +G ++A+ F RM Q+ LK + T +S L+ACS
Sbjct: 103 VFDEMP--QRDVVSWNGLISSYVGNGRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSA 160
Query: 324 GGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVW 383
+E G + +V E E+ ++ L+DM + G L++A + + +V W
Sbjct: 161 LKNLEIGERIYRFVVTEFEM--SVRIGNALVDMFCKCGCLDKARAVFDSMRDK--NVKCW 216
Query: 384 RTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVL---MYNILAGVGRFGDAERLRRVM 440
+++ G V G R+ + ER D VL M N RF +A L R M
Sbjct: 217 TSMV-----FGYVSTG-RIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCM 270
>gi|413919600|gb|AFW59532.1| hypothetical protein ZEAMMB73_249815 [Zea mays]
Length = 886
Score = 241 bits (615), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 128/319 (40%), Positives = 193/319 (60%), Gaps = 7/319 (2%)
Query: 140 LVTWNVMITGLVKWGELEFARSLFEEMPCR--NVVSWTGIIDGYTRMNRSNEALALFRKM 197
L+ +N +I K + ARS+F+ +P R NVV+WT +I GY + SN+AL +F +M
Sbjct: 442 LMVYNALIDMYSKCRSFKAARSIFDSIPRRERNVVTWTVMIGGYAQYGDSNDALKIFSEM 501
Query: 198 VACEYT-EPSEITILAVLPAIWQNGDVKSCQLIHGYGEKR-GFTAFDIRVLNCLIDTYAK 255
++ Y P+ TI +L A ++ + IH Y + + V NCLID Y+K
Sbjct: 502 ISKPYAVAPNAYTISCILMACAHLAALRMGKQIHAYVTRHHEYEPSVYFVANCLIDMYSK 561
Query: 256 CGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFL 315
CG + +A +F+ S+ ++N VSWTS++SG+ MHG GKEA++ F +MQK G P+ ++FL
Sbjct: 562 CGDVDTARNVFD--SMPKRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFVPDDISFL 619
Query: 316 SVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPS 375
+L ACSH G+V++GLN+FD M + +V+ +HY C+ID+L R GRL++A KT +P
Sbjct: 620 VLLYACSHSGMVDQGLNYFDIMRRDYDVVASAEHYACVIDLLARCGRLDKAWKTIQEMPM 679
Query: 376 EITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAER 435
E + V+W LL AC H NVE+ E K++ M+ G Y L+ NI A R+ D R
Sbjct: 680 EPS-AVIWVALLSACRVHSNVELAEYALNKLVNMKAENDGSYTLISNIYANARRWKDVAR 738
Query: 436 LRRVMDERNAFKVPGCSLV 454
+R++M + K PGCS V
Sbjct: 739 IRQLMKKSGIKKRPGCSWV 757
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 101/383 (26%), Positives = 183/383 (47%), Gaps = 31/383 (8%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIY----THSHSPLPPLFDSFTYSFLIRTCATLSH 89
+N+++ + +P+ A L+ ++ I T+ S + + + ++ CA+L
Sbjct: 221 WNSIVAAHVKGSNPRTALELFSEMSMIVHEKATNERSDIISIVN------ILPACASLKA 274
Query: 90 PNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITG 149
++H+ + G + +V AL++ Y G + D+ K+F+ M +++V+WN M+TG
Sbjct: 275 LPQIKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMNDAVKVFNVMEFKDVVSWNAMVTG 334
Query: 150 LVKWGELEFARSLFEEMPCRN----VVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEP 205
+ G A LFE M N V++W+ +I GY + S EAL F++M+ + +EP
Sbjct: 335 YTQSGNFGAAFELFENMRKENIPLDVITWSAVIAGYAQRGCSQEALDAFQQMIL-DGSEP 393
Query: 206 SEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAF-----------DIRVLNCLIDTYA 254
+ +TI+++L A G + IH Y K+ + D+ V N LID Y+
Sbjct: 394 NSVTIISLLSACASLGALSQGMEIHAYSLKKCLLSLDNDFGGDGDGEDLMVYNALIDMYS 453
Query: 255 KCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRM--QKVGLKPNRV 312
KC +A +F+ I +N+V+WT +I G+A +G +A++ F M + + PN
Sbjct: 454 KCRSFKAARSIFDSIPRRERNVVTWTVMIGGYAQYGDSNDALKIFSEMISKPYAVAPNAY 513
Query: 313 TFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYG-CLIDMLGRAGRLEQAEKTAL 371
T +L AC+H + G + E P + CLIDM + G ++ A
Sbjct: 514 TISCILMACAHLAALRMGKQIHAYVTRHHEYEPSVYFVANCLIDMYSKCGDVDTARNVFD 573
Query: 372 GIPSEITDVVVWRTLLGACSFHG 394
+P + V W +++ HG
Sbjct: 574 SMPKR--NEVSWTSMMSGYGMHG 594
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 101/370 (27%), Positives = 164/370 (44%), Gaps = 74/370 (20%)
Query: 73 DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLF 132
D FT + ++ C L G LH +I GF+S+V+V ALV MY G L+D+S +F
Sbjct: 148 DHFTLPYALKACGELPSYCCGRALHGLICCNGFESNVFVCNALVAMYSRCGSLEDASLVF 207
Query: 133 DEMPER---NLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNE 189
DE+ + ++++WN ++ VK A LF EM + I+ RS+
Sbjct: 208 DEITRKGIDDVISWNSIVAAHVKGSNPRTALELFSEM--------SMIVHEKATNERSD- 258
Query: 190 ALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCL 249
I+I+ +LPA + + IH Y + G T D V N L
Sbjct: 259 -----------------IISIVNILPACASLKALPQIKEIHSYAIRNG-TFADAFVCNAL 300
Query: 250 IDTYAKCGCIFSASK-------------------------------LFEDISVER--KNL 276
IDTYAKCG + A K LFE++ E ++
Sbjct: 301 IDTYAKCGSMNDAVKVFNVMEFKDVVSWNAMVTGYTQSGNFGAAFELFENMRKENIPLDV 360
Query: 277 VSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDK 336
++W+++I+G+A G +EA++ F +M G +PN VT +S+L+AC+ G + +G+
Sbjct: 361 ITWSAVIAGYAQRGCSQEALDAFQQMILDGSEPNSVTIISLLSACASLGALSQGMEIHAY 420
Query: 337 MVEEC-----------EVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRT 385
+++C D+ Y LIDM + + A IP +VV W
Sbjct: 421 SLKKCLLSLDNDFGGDGDGEDLMVYNALIDMYSKCRSFKAARSIFDSIPRRERNVVTWTV 480
Query: 386 LLGACSFHGN 395
++G + +G+
Sbjct: 481 MIGGYAQYGD 490
>gi|225440839|ref|XP_002276333.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 705
Score = 241 bits (615), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 140/417 (33%), Positives = 226/417 (54%), Gaps = 44/417 (10%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
++ ++ Y +KA L++ + S LP D T + L+ C+ L + +G
Sbjct: 200 WSAMIAAYGYHGQGRKALDLFRMML-----SSGMLP---DKITLASLLYACSDLKNLQMG 251
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
+H ++ K G +V ALV+MY K
Sbjct: 252 RLIHHIVYKFGLDLDHFVCAALVDMYG-------------------------------KC 280
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
E+E AR LF++MP R++V+WT +I GY +NE+L LF KM E P ++ ++ V
Sbjct: 281 REIEDARFLFDKMPERDLVTWTVMIGGYAECGNANESLVLFDKMRE-EGVVPDKVAMVTV 339
Query: 214 LPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVER 273
+ A + G + + I Y +++ F D+ + +ID +AKCGC+ SA ++F+ +E
Sbjct: 340 VFACAKLGAMHKARTIDDYIQRKKFQ-LDVILGTAMIDMHAKCGCVESAREIFD--RMEE 396
Query: 274 KNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNF 333
KN++SW+++I+ + HG G++A++ F M + G+ PN++T +S+L ACSH GLVEEGL F
Sbjct: 397 KNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACSHAGLVEEGLRF 456
Query: 334 FDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFH 393
F M E+ V D+KHY C++D+LGRAGRL++A K + E D +W LGAC H
Sbjct: 457 FSLMWEDYSVRADVKHYTCVVDLLGRAGRLDEALKLIESMTVE-KDEGLWGAFLGACRTH 515
Query: 394 GNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPG 450
+V + E+ +LE++ G Y+L+ NI A GR+ D + R +M +R K+PG
Sbjct: 516 KDVVLAEKAATSLLELQPQNPGHYILLSNIYANAGRWEDVAKTRDLMSQRRLKKIPG 572
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 109/380 (28%), Positives = 190/380 (50%), Gaps = 46/380 (12%)
Query: 73 DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLF 132
D++T F+IR C L + +G +H ++ K G +V ALV+MYV
Sbjct: 29 DNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYV------------ 76
Query: 133 DEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALA 192
K E+E AR LF++M R++V+WT +I GY ++NE+L
Sbjct: 77 -------------------KCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLV 117
Query: 193 LFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDT 252
LF KM E P ++ ++ V+ A + G + ++I Y +++ F D+ + +ID
Sbjct: 118 LFEKMRE-EGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQ-LDVILGTAMIDM 175
Query: 253 YAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRV 312
YAKCGC+ SA ++F+ +E KN++SW+++I+ + HG G++A++ F M G+ P+++
Sbjct: 176 YAKCGCVESAREIFD--RMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKI 233
Query: 313 TFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGC--LIDMLGRAGRLEQAEKTA 370
T S+L ACS ++ G +V + + D+ H+ C L+DM G+ +E A
Sbjct: 234 TLASLLYACSDLKNLQMG-RLIHHIVYKFGL--DLDHFVCAALVDMYGKCREIEDARFLF 290
Query: 371 LGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRF 430
+P D+V W ++G + GN + K+ E G D V M ++ +
Sbjct: 291 DKMPER--DLVTWTVMIGGYAECGNANESLVLFDKM--REEGVVPDKVAMVTVVFACAKL 346
Query: 431 GDAERLRRVMD--ERNAFKV 448
G + R + D +R F++
Sbjct: 347 GAMHKARTIDDYIQRKKFQL 366
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 107/219 (48%), Gaps = 7/219 (3%)
Query: 177 IIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKR 236
++ G+ ++ FR+++ C P T+ V+ A +++ +LIH K
Sbjct: 1 MVGGFAKVGDYINCFGTFRELIRCG-ARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKF 59
Query: 237 GFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAV 296
G D V L+D Y KC I A LF+ ++ ++LV+WT +I G+A G E++
Sbjct: 60 GLD-LDHFVCAALVDMYVKCREIEDARFLFD--KMQERDLVTWTVMIGGYAECGKANESL 116
Query: 297 ENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDM 356
F +M++ G+ P++V ++V+ AC+ G + + D ++ + D+ +IDM
Sbjct: 117 VLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKA-RIIDDYIQRKKFQLDVILGTAMIDM 175
Query: 357 LGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGN 395
+ G +E A + + E +V+ W ++ A +HG
Sbjct: 176 YAKCGCVESARE--IFDRMEEKNVISWSAMIAAYGYHGQ 212
>gi|297849104|ref|XP_002892433.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338275|gb|EFH68692.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 741
Score = 241 bits (615), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 141/422 (33%), Positives = 237/422 (56%), Gaps = 44/422 (10%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+N ++ Y+ + ++A L+K++ + + + P D T ++ CA LG
Sbjct: 234 WNAMISGYAETGNYKEALELFKEMMK------TNIRP--DESTMVTVVSACAQSGSIELG 285
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
Q+H+ I GF S++ + +L+++Y K
Sbjct: 286 RQVHSWIDDHGFGSNLKIVNSLMDLYS-------------------------------KC 314
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
GELE A LFE + ++V+SW +I GYT MN EAL LF++M+ P+++T+L++
Sbjct: 315 GELETACGLFEGLLYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSG-ERPNDVTMLSI 373
Query: 214 LPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVL-NCLIDTYAKCGCIFSASKLFEDISVE 272
LPA G + + IH Y +KR +A + L LID YAKCG I +A ++F S+
Sbjct: 374 LPACAHLGAIDIGRWIHVYIDKRLKSATNASSLRTSLIDMYAKCGDIEAAHQVFN--SIL 431
Query: 273 RKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLN 332
K+L SW ++I GFAMHG A + F RM+K+G++P+ +TF+ +L+ACS G+++ G +
Sbjct: 432 HKSLSSWNAMIFGFAMHGRADAAFDIFSRMRKIGIEPDDITFVGLLSACSRSGMLDLGRH 491
Query: 333 FFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSF 392
F M ++ ++ P ++HYGC+ID+LG +G ++AE+ + E D V+W +LL AC
Sbjct: 492 IFRTMTQDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINNMEME-PDGVIWCSLLKACKI 550
Query: 393 HGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCS 452
GNVE+GE + ++++E G YVL+ NI A GR+ + ++R +++++ KVPGCS
Sbjct: 551 RGNVELGESFAQNLIKIEPENPGCYVLLSNIYATAGRWNEVAKIRALLNDKGMKKVPGCS 610
Query: 453 LV 454
+
Sbjct: 611 SI 612
Score = 198 bits (503), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 138/464 (29%), Positives = 235/464 (50%), Gaps = 61/464 (13%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNL 92
++NT+ ++L+ P A LY + S LP +S+T+ FL+++CA
Sbjct: 101 IWNTMFRGHALSSDPVSALKLY-----VCMISLGLLP---NSYTFPFLLKSCAKSKAFKE 152
Query: 93 GTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVK 152
G Q+H + K+G+ ++V+T+L+++YV G L+D+ K+FD P R++V++ +I G
Sbjct: 153 GQQIHGHVLKLGYDLDLFVHTSLISVYVQNGRLEDARKVFDRSPHRDVVSYTALIKGYAS 212
Query: 153 WGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILA 212
G +E A+ LF+E+P ++VVSW +I GY EAL LF++M+ P E T++
Sbjct: 213 RGYIESAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKEMMKTN-IRPDESTMVT 271
Query: 213 VLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVE 272
V+ A Q+G ++ + +H + + GF + +++++N L+D Y+KCG + +A LFE +
Sbjct: 272 VVSACAQSGSIELGRQVHSWIDDHGFGS-NLKIVNSLMDLYSKCGELETACGLFEGLLY- 329
Query: 273 RKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGL- 331
K+++SW ++I G+ + KEA+ F M + G +PN VT LS+L AC+H G ++ G
Sbjct: 330 -KDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGERPNDVTMLSILPACAHLGAIDIGRW 388
Query: 332 --NFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEK--------------------- 368
+ DK ++ ++ LIDM + G +E A +
Sbjct: 389 IHVYIDKRLKSATNASSLR--TSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFA 446
Query: 369 ------TALGIPSEI------TDVVVWRTLLGACSFHGNVEMGERVTR------KILEME 410
A I S + D + + LL ACS G +++G + R KI
Sbjct: 447 MHGRADAAFDIFSRMRKIGIEPDDITFVGLLSACSRSGMLDLGRHIFRTMTQDYKITPKL 506
Query: 411 RGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
YG M ++L G F +AE + M E V CSL+
Sbjct: 507 EHYG----CMIDLLGHSGLFKEAEEMINNM-EMEPDGVIWCSLL 545
Score = 45.8 bits (107), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 69/145 (47%), Gaps = 5/145 (3%)
Query: 262 ASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNAC 321
A +FE +++ NL+ W ++ G A+ A++ + M +GL PN TF +L +C
Sbjct: 87 AISVFE--TIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFLLKSC 144
Query: 322 SHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVV 381
+ +EG +++ L D+ + LI + + GRLE A K P DVV
Sbjct: 145 AKSKAFKEGQQIHGHVLKLGYDL-DLFVHTSLISVYVQNGRLEDARKVFDRSPHR--DVV 201
Query: 382 VWRTLLGACSFHGNVEMGERVTRKI 406
+ L+ + G +E +++ +I
Sbjct: 202 SYTALIKGYASRGYIESAQKLFDEI 226
>gi|449520333|ref|XP_004167188.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Cucumis sativus]
Length = 678
Score = 241 bits (615), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 135/422 (31%), Positives = 228/422 (54%), Gaps = 48/422 (11%)
Query: 73 DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLF 132
D +T+ +++ C+ L + +G Q+H I KVG +++++ ALV MY G L+++ K+
Sbjct: 136 DHYTFPCVLKACSGLDNLRVGLQVHDAIVKVGLDTNLFIGNALVAMYGKCGCLREARKVL 195
Query: 133 DEMPERNLVTWNVMITGLVKWGE------------------------------------- 155
D+MP R++V+WN M+ G + G+
Sbjct: 196 DQMPYRDVVSWNSMVAGYAQSGQFDDALEICKEMDSLNLNHDAGTMASLSPVVCYTSLEN 255
Query: 156 LEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLP 215
+++ ++FE M +N++SW +I Y + NEA++LF +M C +P +TI ++LP
Sbjct: 256 VQYIHNMFERMTKKNLISWNVMIAIYVNNSMPNEAVSLFLQMEECG-MKPDAVTIASLLP 314
Query: 216 AIWQNGDVKSCQL---IHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVE 272
A GD+ + L +H Y EK G ++ + N L+D YAKCGC+ A +F+ + +
Sbjct: 315 AC---GDLSALFLGRRLHKYIEK-GNLQPNLLLENALLDMYAKCGCLEEARDVFDKMRL- 369
Query: 273 RKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLN 332
+++VSWTS++S + G G +AV F +M G P+ + F+SVL+ACSH GL+++G +
Sbjct: 370 -RDVVSWTSMMSAYGRSGQGYDAVALFAKMLDSGQNPDSIAFVSVLSACSHTGLLDQGRH 428
Query: 333 FFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSF 392
+F M E+ ++P I+H+ C++D+ GRAG +E+A +P E + VW LL AC
Sbjct: 429 YFRMMTEQYGIVPRIEHFACMVDLFGRAGEVEEAYSFIKQMPMEPNE-RVWGALLSACRV 487
Query: 393 HGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCS 452
H +++G + ++ G YVL+ NI A G + D +R M + KVPG S
Sbjct: 488 HSKMDIGLVAADLLFQLAPKQSGYYVLLSNIYAKAGMWKDVMNVRYAMKKIGIKKVPGIS 547
Query: 453 LV 454
V
Sbjct: 548 NV 549
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 133/294 (45%), Gaps = 17/294 (5%)
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
GE AR +F+ +NVV + +I Y N EAL++F+ M++C + P T V
Sbjct: 85 GETSVARYIFDRSLEKNVVFFNVMIRSYVNNNLYVEALSIFQVMLSCAFN-PDHYTFPCV 143
Query: 214 LPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVER 273
L A +++ +H K G ++ + N L+ Y KCGC+ A K+ + +
Sbjct: 144 LKACSGLDNLRVGLQVHDAIVKVGLDT-NLFIGNALVAMYGKCGCLREARKVLDQMPY-- 200
Query: 274 KNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGL--VEEGL 331
+++VSW S+++G+A G +A+E M + L + T S+ + L V+
Sbjct: 201 RDVVSWNSMVAGYAQSGQFDDALEICKEMDSLNLNHDAGTMASLSPVVCYTSLENVQYIH 260
Query: 332 NFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPS--EITDVVVWRTLLGA 389
N F++M ++ ++ + +I + +A L + D V +LL A
Sbjct: 261 NMFERMTKK-----NLISWNVMIAIYVNNSMPNEAVSLFLQMEECGMKPDAVTIASLLPA 315
Query: 390 CSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGV-GRFGDAERLRRVMDE 442
C + +G R+ + I E+G +L+ N L + + G E R V D+
Sbjct: 316 CGDLSALFLGRRLHKYI---EKGNLQPNLLLENALLDMYAKCGCLEEARDVFDK 366
>gi|255572939|ref|XP_002527400.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533210|gb|EEF34966.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 621
Score = 241 bits (615), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 138/386 (35%), Positives = 212/386 (54%), Gaps = 14/386 (3%)
Query: 78 SFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPE 137
+ +I CA L +H K GF+ + +V +AL+ +Y G + + LF EM
Sbjct: 182 AVVISICADLGAFVRAKIIHEYAVKGGFEEYSFVKSALICVYGKHGDVNGAWNLFLEMKN 241
Query: 138 RNLVTWNVMITGLVKWGELEFARSLFEEMP----CR----NVVSWTGIIDGYTRMNRSNE 189
++L +WN +IT + G + A +F ++ C NVVSW+ IIDG+ R E
Sbjct: 242 KSLASWNALITSHAEAGLCDEALEIFSQLERSGDCPRLRPNVVSWSAIIDGFASKGREKE 301
Query: 190 ALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCL 249
AL LFR+M + + +TI VL + + + IHG+ R +I V N L
Sbjct: 302 ALELFRRMQHAKIL-ANAVTISTVLSLCAELAALHLGREIHGH-VVRAVMVNNILVGNGL 359
Query: 250 IDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKP 309
++ YAKCGC+ +FE ERK+L+SW S+I+G+ MHG+G A+E F +M K+G KP
Sbjct: 360 VNMYAKCGCLKEGHMIFEK--TERKDLISWNSMITGYGMHGLGMNALETFDQMIKLGFKP 417
Query: 310 NRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKT 369
+ VTF++VL++CSH GLV EG FD+M+++ + P ++HY C++D+LGRAG L +A +
Sbjct: 418 DGVTFVAVLSSCSHSGLVHEGRRLFDQMLKKYRIEPQMEHYACMVDLLGRAGLLREASEI 477
Query: 370 ALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEME-RGYGGDYVLMYNILAGVG 428
+P + VW LL +C H N E+ E + + R G Y+L+ NI A G
Sbjct: 478 VKNMPVA-PNACVWGALLNSCRMHNNTEIAEETASHLFNLSHRETTGTYMLLSNIYAASG 536
Query: 429 RFGDAERLRRVMDERNAFKVPGCSLV 454
R+ D+ R+R + K PG S +
Sbjct: 537 RWEDSARVRTSAKTKGLKKNPGQSWI 562
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 113/419 (26%), Positives = 184/419 (43%), Gaps = 60/419 (14%)
Query: 71 LFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSK 130
L D FT+ +IR CA + LG +H + ++GFQSH++V L+ MY LG ++D+
Sbjct: 39 LGDGFTFPLVIRACAYMGSFILGKTIHGHVLEMGFQSHLHVGNELIGMYAKLGRMRDARH 98
Query: 131 LFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCR----NVVSWTGIIDGYTRMNR 186
LFD M R+ ++WN M++ + A +F+ M N+V+WT +I Y R
Sbjct: 99 LFDRMSVRSYISWNTMVSAYAFNYDCNGALEIFQRMESEGMEPNLVTWTSLISSYARSGW 158
Query: 187 SNEALALF--RKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAF--- 241
EA+ LF +M E + + ++++ + G ++IH Y K GF +
Sbjct: 159 HEEAMELFGLMRMKGVEVSGEALAVVISICADL---GAFVRAKIIHEYAVKGGFEEYSFV 215
Query: 242 ---------------------------DIRVLNCLIDTYAKCGCIFSASKLFE------D 268
+ N LI ++A+ G A ++F D
Sbjct: 216 KSALICVYGKHGDVNGAWNLFLEMKNKSLASWNALITSHAEAGLCDEALEIFSQLERSGD 275
Query: 269 ISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVE 328
R N+VSW++II GFA G KEA+E F RMQ + N VT +VL+ C+ +
Sbjct: 276 CPRLRPNVVSWSAIIDGFASKGREKEALELFRRMQHAKILANAVTISTVLSLCAELAALH 335
Query: 329 EGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQA----EKTALGIPSEITDVVVWR 384
G +V V + G L++M + G L++ EKT E D++ W
Sbjct: 336 LGREIHGHVVRAVMVNNILVGNG-LVNMYAKCGCLKEGHMIFEKT------ERKDLISWN 388
Query: 385 TLLGACSFHGNVEMGERVTRKILEMER-GYGGDYVLMYNILAGVGRFGDAERLRRVMDE 442
+++ HG +G +M + G+ D V +L+ G RR+ D+
Sbjct: 389 SMITGYGMHG---LGMNALETFDQMIKLGFKPDGVTFVAVLSSCSHSGLVHEGRRLFDQ 444
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 59/282 (20%), Positives = 122/282 (43%), Gaps = 41/282 (14%)
Query: 48 QKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQS 107
++A L++++Q H+ + L ++ T S ++ CA L+ +LG ++H + + +
Sbjct: 300 KEALELFRRMQ------HAKI--LANAVTISTVLSLCAELAALHLGREIHGHVVRAVMVN 351
Query: 108 HVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMP 167
++ V LVNMY G LK+ +F++ ++L++WN MIT
Sbjct: 352 NILVGNGLVNMYAKCGCLKEGHMIFEKTERKDLISWNSMIT------------------- 392
Query: 168 CRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQ 227
GY AL F +M+ + +P +T +AVL + +G V +
Sbjct: 393 ------------GYGMHGLGMNALETFDQMIKLGF-KPDGVTFVAVLSSCSHSGLVHEGR 439
Query: 228 LIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFA 287
+ K+ + C++D + G + AS++ +++ V N W ++++
Sbjct: 440 RLFDQMLKKYRIEPQMEHYACMVDLLGRAGLLREASEIVKNMPVA-PNACVWGALLNSCR 498
Query: 288 MHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEE 329
MH + A E + + + T++ + N + G E+
Sbjct: 499 MHNNTEIAEETASHLFNLSHRETTGTYMLLSNIYAASGRWED 540
>gi|359485617|ref|XP_003633296.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g10330-like [Vitis vinifera]
Length = 531
Score = 241 bits (615), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 161/466 (34%), Positives = 247/466 (53%), Gaps = 36/466 (7%)
Query: 10 PNNITTQIHSHLLTTNSLLHHSQ----------LFNTLLHFYSLAESPQKAFLLYKQLQQ 59
P I Q+HS L+T LL S L+N+L+ Y P K L++ +
Sbjct: 27 PKQIK-QVHSLLITNGHLLPCSNASNLKWMATLLYNSLIRGYLNFVEPHKTLLIFTHM-- 83
Query: 60 IYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNL----GTQLHAVISKVGFQSHVYVNTAL 115
H P ++ T+ +I+ A+ S P+L GT LH + K G +++ T+L
Sbjct: 84 -LAHQAPP-----NNLTFPSIIKKAASCS-PSLAFMIGTPLHTHVIKRGLSHDLFIQTSL 136
Query: 116 VNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWT 175
V +Y L + D+ ++F+E+ +V+ N M+ L K G++ A LFE MP R+VVSWT
Sbjct: 137 VVLYARLCKVSDACRVFEEISRPCVVSSNAMLDALGKNGDMGSALFLFESMPERDVVSWT 196
Query: 176 GIIDGYTRMNRSNEALALFRKMVACE-----YTEPSEITILAVLPAIWQ---NGDVKSCQ 227
II+G+ R EA+ F KM+ E +P+E T ++VL + G + +
Sbjct: 197 SIINGFGRNRCFEEAIQFFVKMMGHEDVRSCLVKPNEATFVSVLSSCTNLDGVGALHQGK 256
Query: 228 LIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFA 287
IHGY R F + + LI Y K GC+ +A K+F + V K + +W ++IS A
Sbjct: 257 QIHGY-IIRNEVEFTVFMGTALIALYGKTGCLENAMKIFNGMVV--KGVCTWNAMISSLA 313
Query: 288 MHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDI 347
+G K+A++ F +M+ GL P+ VTF++V+ AC+ V GL FF M + V+P +
Sbjct: 314 CNGREKQALDLFEKMKMQGLCPDEVTFVAVITACARSKFVVLGLGFFQSMWCDFGVVPRM 373
Query: 348 KHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKIL 407
HYGC++D+LGRAG LE+A + +P E D V LLGAC HG +E+G V R++L
Sbjct: 374 VHYGCVVDLLGRAGLLEEATEFIKRMPFE-PDATVLGALLGACKVHGAIELGNEVGRRLL 432
Query: 408 EMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSL 453
E++ + G YV + NI AG +G A R+ M E K+P S+
Sbjct: 433 ELQPHHCGRYVTLSNIYAGGEIWGHAADWRKAMTEAGISKIPAYSM 478
>gi|449462814|ref|XP_004149135.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Cucumis sativus]
gi|449523485|ref|XP_004168754.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Cucumis sativus]
Length = 687
Score = 241 bits (615), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 135/388 (34%), Positives = 222/388 (57%), Gaps = 10/388 (2%)
Query: 73 DSFTYSFLIRTCATLSHPNLGTQLHAVISKVG-FQSHVYVNTALVNMYVSLGFLKDSSKL 131
D T + ++ CAT+S G Q+HA + K F++ + + AL++MY + ++ +
Sbjct: 251 DEVTLASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAKCNRINEARII 310
Query: 132 FDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEAL 191
FD MP R++V+ M++G K +++ AR +F M ++V++W +I G T+ + EAL
Sbjct: 311 FDMMPIRSVVSETSMVSGYAKASKVKVARYMFSNMMVKDVITWNALIAGCTQNGENEEAL 370
Query: 192 ALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGF-----TAFDIRVL 246
LFR ++ E P+ T +L A D++ + H + K GF D+ V
Sbjct: 371 ILFR-LLKRESVWPTHYTFGNLLNACANLADLQLGRQAHSHVLKHGFRFQYGEDSDVFVG 429
Query: 247 NCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVG 306
N LID Y KCG + + ++F+ + K+ VSW ++I G+A +G G +A+E F +M + G
Sbjct: 430 NSLIDMYMKCGSVENGCRVFQHML--EKDCVSWNAMIVGYAQNGFGNKALEVFCKMLESG 487
Query: 307 LKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQA 366
P+ VT + VL ACSH GL++EG +F M + ++P HY C++D+LGRAG LE+A
Sbjct: 488 EAPDHVTMIGVLCACSHAGLLDEGRYYFRSMTAQHGLMPLKDHYTCMVDLLGRAGYLEEA 547
Query: 367 EKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAG 426
K + S D +VW +LL AC H N+++GE V +K+LE++ G YVL+ N+ A
Sbjct: 548 -KNLIEEMSMQPDAIVWGSLLAACKVHRNIQLGEYVVKKLLEVDPENSGPYVLLSNMYAE 606
Query: 427 VGRFGDAERLRRVMDERNAFKVPGCSLV 454
+ + R+R++M +R K PGCS +
Sbjct: 607 NRDWKNVVRVRKLMRQRGVVKQPGCSWI 634
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 102/361 (28%), Positives = 174/361 (48%), Gaps = 43/361 (11%)
Query: 71 LFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSK 130
DS +S L+ CA +++HA I K F S ++ L+++Y G + + K
Sbjct: 16 FLDSSPFSKLLNQCARSRSARDTSRVHACIIKSPFASETFIQNRLIDVYGKCGCVDVARK 75
Query: 131 LFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEA 190
LFD M ERN+ +WN +I K G L+ A +FE+MP + SW +I G+ + R +EA
Sbjct: 76 LFDRMLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWNSMISGFEQHGRFDEA 135
Query: 191 LALFRKM-----VACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRV 245
L F +M + EY+ S ++ A L D+K IH + + + D+ +
Sbjct: 136 LVYFAQMHGHGFLVNEYSFGSALSACAGLQ------DLKLGSQIHSLVYRSNYLS-DVYM 188
Query: 246 LNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKV 305
+ L+D Y+KCG + A +F++++V + VSW S+I+ + +G EA++ F M K
Sbjct: 189 GSALVDMYSKCGRVEYAQSVFDEMTVRSR--VSWNSLITCYEQNGPVDEALKIFVEMIKC 246
Query: 306 GLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQ 365
G++P+ VT SV++AC+ ++EG ++V+ E D+ L+DM + R+ +
Sbjct: 247 GVEPDEVTLASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAKCNRINE 306
Query: 366 AEKTALGIP-----SE------------------------ITDVVVWRTLLGACSFHGNV 396
A +P SE + DV+ W L+ C+ +G
Sbjct: 307 ARIIFDMMPIRSVVSETSMVSGYAKASKVKVARYMFSNMMVKDVITWNALIAGCTQNGEN 366
Query: 397 E 397
E
Sbjct: 367 E 367
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 97/348 (27%), Positives = 166/348 (47%), Gaps = 47/348 (13%)
Query: 71 LFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSK 130
L + +++ + CA L LG+Q+H+++ + + S VY+ +ALV+MY G ++ +
Sbjct: 148 LVNEYSFGSALSACAGLQDLKLGSQIHSLVYRSNYLSDVYMGSALVDMYSKCGRVEYAQS 207
Query: 131 LFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEA 190
+FDEM R+ V+WN +IT +E+ G +D EA
Sbjct: 208 VFDEMTVRSRVSWNSLIT-------------CYEQ---------NGPVD---------EA 236
Query: 191 LALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLI 250
L +F +M+ C EP E+T+ +V+ A +K Q IH K D+ + N L+
Sbjct: 237 LKIFVEMIKCG-VEPDEVTLASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALL 295
Query: 251 DTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPN 310
D YAKC I A +F+ + + +++VS TS++SG+A K A F M + +
Sbjct: 296 DMYAKCNRINEARIIFDMMPI--RSVVSETSMVSGYAKASKVKVARYMFSNM----MVKD 349
Query: 311 RVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLE---QAE 367
+T+ +++ C+ G EE L F ++++ V P +G L++ L+ QA
Sbjct: 350 VITWNALIAGCTQNGENEEALILF-RLLKRESVWPTHYTFGNLLNACANLADLQLGRQAH 408
Query: 368 KTALGIP-----SEITDVVVWRTLLGACSFHGNVEMGERVTRKILEME 410
L E +DV V +L+ G+VE G RV + +LE +
Sbjct: 409 SHVLKHGFRFQYGEDSDVFVGNSLIDMYMKCGSVENGCRVFQHMLEKD 456
>gi|357116863|ref|XP_003560196.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Brachypodium distachyon]
Length = 528
Score = 241 bits (615), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 137/337 (40%), Positives = 201/337 (59%), Gaps = 9/337 (2%)
Query: 122 LGFLKDS-SKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEM-PCRNVVSWTGIID 179
LG +++ ++ D ++V N +I K G+ AR F M P +NVVSW +I
Sbjct: 170 LGLARETHRRVLDAGVALDVVACNALIDMYAKCGDAAAARRCFRRMLPAKNVVSWNTMIA 229
Query: 180 GYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFT 239
R + EAL+ FR+M P + T +AVL A G + + + +H Y R
Sbjct: 230 ACARSGDTREALSWFREMQRSGCVRPDDATFVAVLGACADLGALDAGRWVHAYMMGRHTK 289
Query: 240 AFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENF 299
A + V N L+D YAKCG + A ++F+ ++ R+++ ++TS+ISG AMHG G+EA+
Sbjct: 290 A--VVVGNALLDMYAKCGAVDGAKEVFD--AMPRRDVYTYTSMISGLAMHGRGQEALALL 345
Query: 300 GRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGR 359
M++ G++PN VTFL VL+AC H GLVEEGL F+ + E V P I+HYGC++DMLGR
Sbjct: 346 ADMRRAGVRPNAVTFLGVLSACCHAGLVEEGLLHFNAIPESLGVAPGIEHYGCVVDMLGR 405
Query: 360 AGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMER--GYGGDY 417
AGRL++AE+ +P+ D ++W +LL AC HG+V ERV R++ +++ GDY
Sbjct: 406 AGRLDEAEELVARMPAR-PDALIWGSLLSACRAHGHVARAERVMRRMADVDGDLADAGDY 464
Query: 418 VLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
VLM N+ A GR G A +LR+ M KVPGCSL+
Sbjct: 465 VLMSNMYASKGRHGKAVQLRKQMRRGRMDKVPGCSLI 501
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 122/259 (47%), Gaps = 13/259 (5%)
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
G+ AR+LFE +VVSWT ++ G+TR+ EA ALF M +
Sbjct: 104 GQGAVARALFER-GAPDVVSWTAMVTGHTRLGLFEEAAALFLAMADGVAVDAVAAAAAFA 162
Query: 214 LPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVER 273
A + + + H G A D+ N LID YAKCG +A + F + +
Sbjct: 163 ACAGAGD--LGLARETHRRVLDAG-VALDVVACNALIDMYAKCGDAAAARRCFRRM-LPA 218
Query: 274 KNLVSWTSIISGFAMHGMGKEAVENFGRMQKVG-LKPNRVTFLSVLNACSHGGLVEEGLN 332
KN+VSW ++I+ A G +EA+ F MQ+ G ++P+ TF++VL AC+ G ++ G
Sbjct: 219 KNVVSWNTMIAACARSGDTREALSWFREMQRSGCVRPDDATFVAVLGACADLGALDAGRW 278
Query: 333 FFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSF 392
M+ + + L+DM + G ++ A++ +P DV + +++ +
Sbjct: 279 VHAYMMGRHTKAVVVGN--ALLDMYAKCGAVDGAKEVFDAMPRR--DVYTYTSMISGLAM 334
Query: 393 HGNVEMGERVTRKILEMER 411
HG G+ + +M R
Sbjct: 335 HGR---GQEALALLADMRR 350
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 112/274 (40%), Gaps = 45/274 (16%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+NT++ + + ++A ++++Q+ S P D T+ ++ CA L + G
Sbjct: 224 WNTMIAACARSGDTREALSWFREMQR----SGCVRP---DDATFVAVLGACADLGALDAG 276
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
+HA + ++ V V AL++MY G + + ++FD MP R++ T+ MI+GL
Sbjct: 277 RWVHAYMMGRHTKA-VVVGNALLDMYAKCGAVDGAKEVFDAMPRRDVYTYTSMISGLAMH 335
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
G R EALAL M P+ +T L V
Sbjct: 336 G-------------------------------RGQEALALLADMRRAG-VRPNAVTFLGV 363
Query: 214 LPAIWQNGDVKSCQLIH--GYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISV 271
L A G V+ L+H E G A I C++D + G + A +L +
Sbjct: 364 LSACCHAGLVEE-GLLHFNAIPESLG-VAPGIEHYGCVVDMLGRAGRLDEAEELVARMPA 421
Query: 272 ERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKV 305
R + + W S++S HG A RM V
Sbjct: 422 -RPDALIWGSLLSACRAHGHVARAERVMRRMADV 454
>gi|326507326|dbj|BAJ95740.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 798
Score = 241 bits (615), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 136/378 (35%), Positives = 217/378 (57%), Gaps = 6/378 (1%)
Query: 77 YSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMP 136
+S ++ CATL G ++HA K+G ++V+V+++L++MY +D+ +FD +P
Sbjct: 384 FSSVLSACATLEDLRGGARIHARSLKMGSSTNVFVSSSLIDMYCKCKKCRDAQTIFDTLP 443
Query: 137 ERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRK 196
E+N+V WN + +G G++ A LF++MP RN+ SW II GY + + +AL F
Sbjct: 444 EKNIVCWNSLASGYSYNGKMVEAMYLFKKMPARNLASWNTIISGYAQNRQFVDALRSFNA 503
Query: 197 MVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKC 256
M+A P EIT +VL A + + ++ H K G I + L D YAK
Sbjct: 504 MLASGQV-PGEITFSSVLLACANLCSLVTGKMAHAKTIKLGMEE-SIFIGTALSDMYAKS 561
Query: 257 GCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLS 316
G + S+ ++F + +N V+WT++I G A +G +E++ M G+ PN TFL+
Sbjct: 562 GDLQSSKRMF--YQMPERNDVTWTAMIQGLAENGFAEESILLLEDMMATGMTPNEHTFLA 619
Query: 317 VLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSE 376
+L ACSHGGLVE+ +++F+KM + + P KHY C++D+L RAGRL +AE + PS+
Sbjct: 620 LLFACSHGGLVEQAIHYFEKM-QAWGISPKEKHYTCMVDVLARAGRLIEAEALLMKTPSK 678
Query: 377 ITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERL 436
++ W LL AC+ + N E+GER +++ E+ + YVL+ N+ A GR+ DA R+
Sbjct: 679 -SEANSWAALLSACNTYKNEEIGERAAKRLHELGKDNTAGYVLLSNMYASCGRWKDAARI 737
Query: 437 RRVMDERNAFKVPGCSLV 454
R +M K GCS V
Sbjct: 738 RVLMKGTTLKKDGGCSWV 755
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 88/316 (27%), Positives = 141/316 (44%), Gaps = 43/316 (13%)
Query: 115 LVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSW 174
+V+ +V G + + LFD MPERN+V++ M+ L+K G + A L+E+ P +V +
Sbjct: 157 MVHEHVKAGDIASARGLFDGMPERNVVSYTTMVDALMKRGRVAEAVELYEQCPSGSVAFF 216
Query: 175 TGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGE 234
T I G+ R + AL +FRKMV+C P+ IT + ++ A G+ I G
Sbjct: 217 TATISGFVRNELHHNALGVFRKMVSCG-VRPNGITFVCMIKACVGAGEFGLAMSIVGSAI 275
Query: 235 KRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVE---------------------- 272
K F I V N LI Y + G +A K+F+++ V+
Sbjct: 276 KSNFFESSIEVQNSLITLYLRMGDAAAARKVFDEMDVKDVVSWTALLDVYSESGDLDGAR 335
Query: 273 -------RKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACS--- 322
+N VSW ++I+ G EAV+ + +M G +PN F SVL+AC+
Sbjct: 336 RVLDAMPERNEVSWGTLIARHEQRGNAAEAVKLYSQMLADGCRPNISCFSSVLSACATLE 395
Query: 323 --HGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDV 380
GG + KM V LIDM + + A+ +P + ++
Sbjct: 396 DLRGGARIHARSL--KMGSSTNVFVS----SSLIDMYCKCKKCRDAQTIFDTLPEK--NI 447
Query: 381 VVWRTLLGACSFHGNV 396
V W +L S++G +
Sbjct: 448 VCWNSLASGYSYNGKM 463
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 87/355 (24%), Positives = 161/355 (45%), Gaps = 35/355 (9%)
Query: 73 DSFTYSFLIRTCATLSHPNLGTQL-HAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKL 131
+ T+ +I+ C L + + I F+S + V +L+ +Y+ +G + K+
Sbjct: 247 NGITFVCMIKACVGAGEFGLAMSIVGSAIKSNFFESSIEVQNSLITLYLRMGDAAAARKV 306
Query: 132 FDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEAL 191
FDEM +++V+W ++ + G+L+ AR + + MP RN VSW +I + + + EA+
Sbjct: 307 FDEMDVKDVVSWTALLDVYSESGDLDGARRVLDAMPERNEVSWGTLIARHEQRGNAAEAV 366
Query: 192 ALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLID 251
L+ +M+A + P+ +VL A D++ IH K G ++ ++ V + LID
Sbjct: 367 KLYSQMLA-DGCRPNISCFSSVLSACATLEDLRGGARIHARSLKMG-SSTNVFVSSSLID 424
Query: 252 TYAKCGCIFSASKLFEDI-----------------------------SVERKNLVSWTSI 282
Y KC A +F+ + + +NL SW +I
Sbjct: 425 MYCKCKKCRDAQTIFDTLPEKNIVCWNSLASGYSYNGKMVEAMYLFKKMPARNLASWNTI 484
Query: 283 ISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECE 342
ISG+A + +A+ +F M G P +TF SVL AC++ + G K + +
Sbjct: 485 ISGYAQNRQFVDALRSFNAMLASGQVPGEITFSSVLLACANLCSLVTGKMAHAKTI-KLG 543
Query: 343 VLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVE 397
+ I L DM ++G L+ +++ +P + V W ++ + +G E
Sbjct: 544 MEESIFIGTALSDMYAKSGDLQSSKRMFYQMPER--NDVTWTAMIQGLAENGFAE 596
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 95/215 (44%), Gaps = 42/215 (19%)
Query: 75 FTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDE 134
T+S ++ CA L G HA K+G + +++ TAL +MY G L+ S ++F +
Sbjct: 514 ITFSSVLLACANLCSLVTGKMAHAKTIKLGMEESIFIGTALSDMYAKSGDLQSSKRMFYQ 573
Query: 135 MPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALF 194
MPERN VTW MI GL + G E E++ L
Sbjct: 574 MPERNDVTWTAMIQGLAENGFAE-------------------------------ESILLL 602
Query: 195 RKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDI----RVLNCLI 250
M+A T P+E T LA+L A G V+ Q IH Y EK A+ I + C++
Sbjct: 603 EDMMATGMT-PNEHTFLALLFACSHGGLVE--QAIH-YFEK--MQAWGISPKEKHYTCMV 656
Query: 251 DTYAKCGCIFSASKLFEDISVERKNLVSWTSIISG 285
D A+ G + A L + + SW +++S
Sbjct: 657 DVLARAGRLIEAEALLMK-TPSKSEANSWAALLSA 690
>gi|449451283|ref|XP_004143391.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g37570-like [Cucumis sativus]
gi|449519310|ref|XP_004166678.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g37570-like [Cucumis sativus]
Length = 565
Score = 241 bits (615), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 138/444 (31%), Positives = 224/444 (50%), Gaps = 66/444 (14%)
Query: 73 DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNM-------------- 118
D +T+ L++ CA+ G LH I + G +YV T+LVN+
Sbjct: 126 DRYTFPSLLKVCASEGKMMEGMALHGSILRCGVDEDIYVTTSLVNLYGKGGLIDCARKVF 185
Query: 119 -----------------YVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARS 161
Y S+G L ++ +LFD MPERN+ +WN +I G +K G+++ A
Sbjct: 186 DGMSERNVVSWTAMIVGYSSIGNLVEAKRLFDLMPERNVASWNAIIGGYMKMGDVKSAEK 245
Query: 162 LFEEMPCRNVVS-------------------------------WTGIIDGYTRMNRSNEA 190
F+EMP +NVVS W+ +I GYT+ + NEA
Sbjct: 246 AFDEMPEKNVVSFTTMIDGYAKAGDMLSARNLFQKAPERDIIAWSALISGYTQNGQPNEA 305
Query: 191 LALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLI 250
+ F +M + +P + + +++ A Q G++ + + Y + V LI
Sbjct: 306 VKTFLEM-SSRNVKPDKFVLTSLMLACSQLGNLDLAKWVDSYATRCSVDLRGAHVTAALI 364
Query: 251 DTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPN 310
D AKCG + A LFE + +++L+S+ S++ G ++HG G +AV F RM L P+
Sbjct: 365 DMNAKCGNMERAMYLFEKM--PKRDLISYCSVMQGLSIHGHGDQAVSLFERMLGEDLTPD 422
Query: 311 RVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTA 370
V F +L ACS GLV+EG ++F+ M + ++P + HY C++D+L R+GRL++A +
Sbjct: 423 DVAFTVILTACSRAGLVDEGWHYFEMMRCKYSMVPSVDHYACIVDLLSRSGRLKEAYELI 482
Query: 371 LGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRF 430
+P + + W LLGAC + + E+ E V +++E+E G+YVL+ NI A R+
Sbjct: 483 KSVPVQ-SHAGAWGALLGACKLYCDSELAEVVASRLIEIEPENAGNYVLLSNIYAAADRW 541
Query: 431 GDAERLRRVMDERNAFKVPGCSLV 454
D +R M+ER K+PGCS +
Sbjct: 542 LDVSAVRNQMNERGLRKIPGCSWI 565
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 82/366 (22%), Positives = 153/366 (41%), Gaps = 53/366 (14%)
Query: 75 FTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDE 134
++ S L++ C T H +L Q+HA + + G + ++ T ++ S+ + S+ +FD
Sbjct: 30 YSISALLKLCKT--HIDL-HQVHAHLIQKGLEQDSFLVTQFISASNSVAHISYSTSVFDR 86
Query: 135 MPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALF 194
+ + WN +++G +L+F II Y RM R + A
Sbjct: 87 VLSPSTFLWNSLVSGYC--AKLQF----------------VDIISLYVRMKREDGA---- 124
Query: 195 RKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYA 254
P T ++L G + +HG + G DI V L++ Y
Sbjct: 125 ----------PDRYTFPSLLKVCASEGKMMEGMALHGSILRCGVDE-DIYVTTSLVNLYG 173
Query: 255 KCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTF 314
K G I A K+F+ +S +N+VSWT++I G++ G EA F M + N ++
Sbjct: 174 KGGLIDCARKVFDGMS--ERNVVSWTAMIVGYSSIGNLVEAKRLFDLMP----ERNVASW 227
Query: 315 LSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIP 374
+++ G V+ FD+M E+ ++ + +ID +AG + A P
Sbjct: 228 NAIIGGYMKMGDVKSAEKAFDEMPEK-----NVVSFTTMIDGYAKAGDMLSARNLFQKAP 282
Query: 375 SEITDVVVWRTLLGACSFHGNVEMGERVTRKILEM-ERGYGGDYVLMYNILAGVGRFGDA 433
D++ W L+ + +G + LEM R D ++ +++ + G+
Sbjct: 283 ER--DIIAWSALISGYTQNGQ---PNEAVKTFLEMSSRNVKPDKFVLTSLMLACSQLGNL 337
Query: 434 ERLRRV 439
+ + V
Sbjct: 338 DLAKWV 343
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 76/165 (46%), Gaps = 11/165 (6%)
Query: 279 WTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMV 338
W S++SG+ + + + RM++ P+R TF S+L C+ G + EG+ ++
Sbjct: 95 WNSLVSGYCAKLQFVDIISLYVRMKREDGAPDRYTFPSLLKVCASEGKMMEGMALHGSIL 154
Query: 339 EECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEM 398
C V DI L+++ G+ G ++ A K G+ +VV W ++ S GN+
Sbjct: 155 -RCGVDEDIYVTTSLVNLYGKGGLIDCARKVFDGMSER--NVVSWTAMIVGYSSIGNLVE 211
Query: 399 GERVTRKILEMERGYGGDYVLMYN-ILAGVGRFGDAERLRRVMDE 442
+R+ + E V +N I+ G + GD + + DE
Sbjct: 212 AKRLFDLMPERN-------VASWNAIIGGYMKMGDVKSAEKAFDE 249
>gi|357519199|ref|XP_003629888.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355523910|gb|AET04364.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 515
Score = 241 bits (615), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 147/477 (30%), Positives = 253/477 (53%), Gaps = 51/477 (10%)
Query: 14 TTQIHSHLLTTNSLLHHSQLFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFD 73
T QIH+H +T N+L S + + +L F++L SP+ F + + ++TH P P +FD
Sbjct: 4 TKQIHAHAIT-NNLTRFSYISSRILAFFAL--SPRGDF---RYAETLFTHI--PNPNIFD 55
Query: 74 --------------------------------SFTYSFLIRTCATLSHPNLGTQLHAVIS 101
S T++ L++ C +LS Q+ +
Sbjct: 56 YNSIITSYTTNSQFHKLFFVFTKMLNTNIRPNSHTFTTLVKACVSLSSLE---QVFTLSM 112
Query: 102 KVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARS 161
K+G S VY ++++N + + + ++FDE RN+V W +++G G + AR
Sbjct: 113 KLGNSSDVYFVSSVINAFSKHSAIHLARQVFDECSNRNVVCWTSLVSGYCSCGLVNEARD 172
Query: 162 LFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMV----ACEYTEPSEITILAVLPAI 217
+F++MP RN S++ ++ GY R +E + LFR++ C + + +++VL A
Sbjct: 173 VFDKMPLRNEASYSAMVSGYVRNGFFSEGVQLFRELKKKDKGCACLKFNGALLVSVLNAC 232
Query: 218 WQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLV 277
G + + IH Y E+ G +D+ + LID Y KCG + A K+F + V K++
Sbjct: 233 TMVGAFEEGKWIHSYVEENGL-EYDLELGTALIDFYMKCGWVKGAEKVFNKMPV--KDVA 289
Query: 278 SWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKM 337
+W+++I G A++G K A+E F +M+KVG KPN VTF+ VL AC+H L E F M
Sbjct: 290 TWSAMILGLAINGNNKMALELFEKMEKVGPKPNEVTFVGVLTACNHKSLFGESARLFGIM 349
Query: 338 VEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVE 397
E+ + P I+HYGC++D+L R+G++++A + E D +W +LL C HG+ E
Sbjct: 350 SEKYNITPSIEHYGCVVDVLARSGQVKKALTFINSMHIE-PDGAIWGSLLNGCLMHGHYE 408
Query: 398 MGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
+G++V + ++E E + G YVL+ N+ A +G++ +R++M +R V G S +
Sbjct: 409 LGQKVGKYLIEFEPKHSGRYVLLANMYANMGKWEGVSEVRKLMKDRGVMIVSGWSFI 465
>gi|224107245|ref|XP_002314420.1| predicted protein [Populus trichocarpa]
gi|222863460|gb|EEF00591.1| predicted protein [Populus trichocarpa]
Length = 571
Score = 241 bits (615), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 138/421 (32%), Positives = 228/421 (54%), Gaps = 11/421 (2%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+ T++ Y E ++A ++Y+ + + L P T LI C G
Sbjct: 161 WGTIIDGYVRVERLREALMMYRLMVS------TGLGP--SEVTMIDLISACGRAMAIVEG 212
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
QLH V+ K F + +V +++ Y + G + ++ + + ++ + N +I G ++
Sbjct: 213 QQLHCVVVKTSFDCYDFVQATVIHFYSACGRINEACFQLEFGMKDHVASRNALIAGFIRN 272
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
++ AR LF EMP R+V SW+ +I GYT+ ++ AL LF +MV P+E+T+++V
Sbjct: 273 RIIDQARELFNEMPERDVFSWSTMISGYTQSDQPGMALELFHRMVTSG-IRPNEVTMVSV 331
Query: 214 LPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVER 273
AI G +K + H Y D + +ID YAKCG I +A ++F I +
Sbjct: 332 FSAIAALGTLKEGRWAHEYVHYNSIPLND-NLSASIIDMYAKCGSINTALEVFYQIRDKA 390
Query: 274 KNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNF 333
+ W +II G A HG K ++E + +Q+ +K + +TF+ VL+AC H GLV G ++
Sbjct: 391 STVSPWNTIICGLATHGHAKLSLEIYSDLQRRHIKLSAITFIGVLSACCHAGLVGLGKSY 450
Query: 334 FDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFH 393
F M + + PDI+HYGC++D+LG+AGRLE+ E+ +P + DVV+W LL AC H
Sbjct: 451 FKSMKSKYNIDPDIRHYGCMVDLLGKAGRLEEVEELIRSMPMK-ADVVIWGMLLSACKTH 509
Query: 394 GNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSL 453
N+ +GER + +++ +G +L+ N+ A VGR+ DA +RRVM ++PG S
Sbjct: 510 RNITIGERAAENLAKLDPSHGPSRILLSNLYADVGRWEDAFLVRRVMQSHRMHRLPGYSG 569
Query: 454 V 454
V
Sbjct: 570 V 570
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 106/381 (27%), Positives = 184/381 (48%), Gaps = 44/381 (11%)
Query: 49 KAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSH 108
+A +YK+++ + +P + T + +I C + LH ++ K+ F
Sbjct: 44 EAIKVYKEMRSV-----GVVP---NEVTMASVISACCRVGRIWDCRMLHGLVIKMMFDGF 95
Query: 109 VYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPC 168
V V+T L+NMY + L ++ LFDEM E+N+V+WNVM+ G K G A+ +FE +P
Sbjct: 96 VLVSTNLLNMYCASSSLGEARALFDEMQEKNVVSWNVMLNGYSKAGFANLAKEVFEMIPD 155
Query: 169 RNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQL 228
+++VSW IIDGY R+ R EAL ++R MV+ PSE+T++ ++ A + + Q
Sbjct: 156 KDIVSWGTIIDGYVRVERLREALMMYRLMVSTGLG-PSEVTMIDLISACGRAMAIVEGQQ 214
Query: 229 IHGYGEKRGFTAFDIRVLNCLIDTYAKCG------------------------------- 257
+H K F +D V +I Y+ CG
Sbjct: 215 LHCVVVKTSFDCYDF-VQATVIHFYSACGRINEACFQLEFGMKDHVASRNALIAGFIRNR 273
Query: 258 CIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSV 317
I A +LF ++ +++ SW+++ISG+ A+E F RM G++PN VT +SV
Sbjct: 274 IIDQARELFNEMP--ERDVFSWSTMISGYTQSDQPGMALELFHRMVTSGIRPNEVTMVSV 331
Query: 318 LNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEI 377
+A + G ++EG + + V + + +IDM + G + A + I +
Sbjct: 332 FSAIAALGTLKEG-RWAHEYVHYNSIPLNDNLSASIIDMYAKCGSINTALEVFYQIRDKA 390
Query: 378 TDVVVWRTLLGACSFHGNVEM 398
+ V W T++ + HG+ ++
Sbjct: 391 STVSPWNTIICGLATHGHAKL 411
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 107/215 (49%), Gaps = 33/215 (15%)
Query: 146 MITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEP 205
MI+G VK G L+ AR LFE MP + VS+T +I G+ + + EA+ ++++M + P
Sbjct: 1 MISGYVKSGNLDDARKLFEVMPQKGCVSYTTMIMGFVKNDFWGEAIKVYKEMRSVGVV-P 59
Query: 206 SEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAF------------------DIRVL- 246
+E+T+ +V+ A + G + C+++HG K F F + R L
Sbjct: 60 NEVTMASVISACCRVGRIWDCRMLHGLVIKMMFDGFVLVSTNLLNMYCASSSLGEARALF 119
Query: 247 -----------NCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEA 295
N +++ Y+K G A ++FE I K++VSW +II G+ +EA
Sbjct: 120 DEMQEKNVVSWNVMLNGYSKAGFANLAKEVFEMIP--DKDIVSWGTIIDGYVRVERLREA 177
Query: 296 VENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEG 330
+ + M GL P+ VT + +++AC + EG
Sbjct: 178 LMMYRLMVSTGLGPSEVTMIDLISACGRAMAIVEG 212
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 99/221 (44%), Gaps = 56/221 (25%)
Query: 249 LIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLK 308
+I Y K G + A KLFE + +K VS+T++I GF + EA++ + M+ VG+
Sbjct: 1 MISGYVKSGNLDDARKLFE--VMPQKGCVSYTTMIMGFVKNDFWGEAIKVYKEMRSVGVV 58
Query: 309 PNRVTFLSVLNACS-----------HGGLVE------------------------EGLNF 333
PN VT SV++AC HG +++ E
Sbjct: 59 PNEVTMASVISACCRVGRIWDCRMLHGLVIKMMFDGFVLVSTNLLNMYCASSSLGEARAL 118
Query: 334 FDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFH 393
FD+M E+ ++ + +++ +AG A++ IP + D+V W T++
Sbjct: 119 FDEMQEK-----NVVSWNVMLNGYSKAGFANLAKEVFEMIPDK--DIVSWGTII-----D 166
Query: 394 GNVEMGERVTRKILEMER-----GYGGDYVLMYNILAGVGR 429
G V + ER+ R+ L M R G G V M ++++ GR
Sbjct: 167 GYVRV-ERL-REALMMYRLMVSTGLGPSEVTMIDLISACGR 205
>gi|297793453|ref|XP_002864611.1| hypothetical protein ARALYDRAFT_496037 [Arabidopsis lyrata subsp.
lyrata]
gi|297310446|gb|EFH40870.1| hypothetical protein ARALYDRAFT_496037 [Arabidopsis lyrata subsp.
lyrata]
Length = 534
Score = 241 bits (615), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 137/390 (35%), Positives = 221/390 (56%), Gaps = 21/390 (5%)
Query: 65 HSPLPPLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGF 124
HS + P D++ + +++ C + ++H+ + K+GF S V L+ +Y G
Sbjct: 120 HSSVLP--DNYVITSVLKACGL----DECREIHSQVLKLGFGSSRSVGLKLMEIYGKSGE 173
Query: 125 LKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRM 184
L D+ K+FDEMP+R+ V VMI + G ++ A LF+++ ++ V WT +IDG R
Sbjct: 174 LADAKKVFDEMPDRDQVVATVMINCYSECGCIKEALELFQDVKIKDTVCWTAMIDGLVRN 233
Query: 185 NRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIR 244
N+AL LFR+M + P+ I + W +G +H + E + +
Sbjct: 234 REMNKALELFREMQLSVFYLPARIWVR------WSSG-----AGVHSFVENQKMELSNF- 281
Query: 245 VLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQK 304
V N LI+ Y++CG I A ++F+ + K+++S+ ++ISG AMHG EA+ F M
Sbjct: 282 VGNALINMYSRCGDINVAKRVFK--GMRDKDVISYNTMISGLAMHGASVEAINVFRDMVN 339
Query: 305 VGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLE 364
G +PN+VT +++LNACSHGGL++ GL F+ M V P I+HYGC++D+LGR GRLE
Sbjct: 340 RGFRPNQVTLVALLNACSHGGLLDIGLEVFNSMWRVFSVEPQIEHYGCIVDLLGRVGRLE 399
Query: 365 QAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNIL 424
+A + + E D ++ LL AC HGN+E+GE++ +++ E E G YVL+ +I
Sbjct: 400 EAYRFIENMLIE-PDHIMLGALLSACKIHGNMELGEKIAKRLFESENPDSGTYVLLSHIY 458
Query: 425 AGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
A G++ ++ +R M E K PGCS +
Sbjct: 459 ASSGKWKESTEIRESMRESGIEKEPGCSTI 488
>gi|449458017|ref|XP_004146744.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Cucumis sativus]
Length = 678
Score = 241 bits (614), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 135/422 (31%), Positives = 228/422 (54%), Gaps = 48/422 (11%)
Query: 73 DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLF 132
D +T+ +++ C+ L + +G Q+H I KVG +++++ ALV MY G L+++ K+
Sbjct: 136 DHYTFPCVLKACSGLDNLRVGLQVHDAIVKVGLDTNLFIGNALVAMYGKCGCLREARKVL 195
Query: 133 DEMPERNLVTWNVMITGLVKWGE------------------------------------- 155
D+MP R++V+WN M+ G + G+
Sbjct: 196 DQMPYRDVVSWNSMVAGYAQSGQFDDALEICKEMDSLNLNHDAGTMASLSPVVCYTSLEN 255
Query: 156 LEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLP 215
+++ ++FE M +N++SW +I Y + NEA++LF +M C +P +TI ++LP
Sbjct: 256 VQYIHNMFERMTKKNLISWNVMIAIYVNNSMPNEAVSLFLQMEECG-MKPDAVTIASLLP 314
Query: 216 AIWQNGDVKSCQL---IHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVE 272
A GD+ + L +H Y EK G ++ + N L+D YAKCGC+ A +F+ + +
Sbjct: 315 AC---GDLSALFLGRRLHKYIEK-GNLRPNLLLENALLDMYAKCGCLEEARDVFDKMRL- 369
Query: 273 RKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLN 332
+++VSWTS++S + G G +AV F +M G P+ + F+SVL+ACSH GL+++G +
Sbjct: 370 -RDVVSWTSMMSAYGRSGQGYDAVALFAKMLDSGQNPDSIAFVSVLSACSHTGLLDQGRH 428
Query: 333 FFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSF 392
+F M E+ ++P I+H+ C++D+ GRAG +E+A +P E + VW LL AC
Sbjct: 429 YFRMMTEQYGIVPRIEHFACMVDLFGRAGEVEEAYSFIKQMPMEPNE-RVWGALLSACRV 487
Query: 393 HGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCS 452
H +++G + ++ G YVL+ NI A G + D +R M + KVPG S
Sbjct: 488 HSKMDIGLVAADLLFQLAPKQSGYYVLLSNIYAKAGMWKDVMNVRYAMKKIGIKKVPGIS 547
Query: 453 LV 454
V
Sbjct: 548 NV 549
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 133/294 (45%), Gaps = 17/294 (5%)
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
GE AR +F+ +NVV + +I Y N EAL++F+ M++C + P T V
Sbjct: 85 GETSVARYIFDRSLEKNVVFFNVMIRSYVNNNLYVEALSIFQVMLSCAFN-PDHYTFPCV 143
Query: 214 LPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVER 273
L A +++ +H K G ++ + N L+ Y KCGC+ A K+ + +
Sbjct: 144 LKACSGLDNLRVGLQVHDAIVKVGLDT-NLFIGNALVAMYGKCGCLREARKVLDQMPY-- 200
Query: 274 KNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGL--VEEGL 331
+++VSW S+++G+A G +A+E M + L + T S+ + L V+
Sbjct: 201 RDVVSWNSMVAGYAQSGQFDDALEICKEMDSLNLNHDAGTMASLSPVVCYTSLENVQYIH 260
Query: 332 NFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPS--EITDVVVWRTLLGA 389
N F++M ++ ++ + +I + +A L + D V +LL A
Sbjct: 261 NMFERMTKK-----NLISWNVMIAIYVNNSMPNEAVSLFLQMEECGMKPDAVTIASLLPA 315
Query: 390 CSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGV-GRFGDAERLRRVMDE 442
C + +G R+ + I E+G +L+ N L + + G E R V D+
Sbjct: 316 CGDLSALFLGRRLHKYI---EKGNLRPNLLLENALLDMYAKCGCLEEARDVFDK 366
>gi|414885035|tpg|DAA61049.1| TPA: hypothetical protein ZEAMMB73_995105 [Zea mays]
Length = 824
Score = 241 bits (614), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 139/380 (36%), Positives = 205/380 (53%), Gaps = 42/380 (11%)
Query: 109 VYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPC 168
V+ TA+V+ Y G L+++ ++FD MP++N V+WN M+ V+ +E A+ LF+ MPC
Sbjct: 324 VFTWTAIVSGYAQNGMLEEAKRVFDAMPDKNAVSWNAMMAAYVQRRMMEEAKELFDAMPC 383
Query: 169 RNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNG-DVKSCQ 227
RNV SW ++ GY + +EA A+F M + ++ A+L A Q G ++ Q
Sbjct: 384 RNVASWNTMLTGYAQAGMLDEARAIFGMM-----PQKDAVSWAAMLAAYSQIGFSEETLQ 438
Query: 228 LIHGYGE------KRGF-----TAFDIRVLNC----------------------LIDTYA 254
L G + F T DI L C L+ Y
Sbjct: 439 LFKEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHSRLIKAGYGVGCFVGNALLAMYF 498
Query: 255 KCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTF 314
KCG + A FE++ E +++VSW ++I+G+A HG GKEA+E F M+K KP+ +T
Sbjct: 499 KCGSMEEAHSAFEEM--EERDVVSWNTMIAGYARHGFGKEALEVFDTMRKTSTKPDDITL 556
Query: 315 LSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIP 374
+ VL ACSH GLVE+G+++F M + V +HY C+ID+LGRAGRL++A +P
Sbjct: 557 VGVLAACSHSGLVEKGISYFYSMHRDFGVATKPEHYTCMIDLLGRAGRLDEAVNLMKDMP 616
Query: 375 SEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAE 434
E D +W LLGA H N E+G KI E+E G YVL+ NI A G++ D +
Sbjct: 617 FE-PDSTMWGALLGASRIHRNSELGRNAAEKIFELEPENAGMYVLLSNIYASSGKWRDVD 675
Query: 435 RLRRVMDERNAFKVPGCSLV 454
++R +M ER KVPG S +
Sbjct: 676 KMRHIMHERGVKKVPGFSWI 695
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 143/287 (49%), Gaps = 25/287 (8%)
Query: 113 TALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVV 172
AL+ YV ++++ K+F++MP+R++V+WN M++G + G++ AR LF+ P R+V
Sbjct: 266 NALMAGYVQRSQIEEAQKMFNKMPQRDVVSWNTMVSGYARRGDMAEARRLFDVAPIRDVF 325
Query: 173 SWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGY 232
+WT I+ GY + EA +F M + + ++ A++ A Q ++ + +
Sbjct: 326 TWTAIVSGYAQNGMLEEAKRVFDAM-----PDKNAVSWNAMMAAYVQRRMMEEAKELFDA 380
Query: 233 GEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMG 292
R ++ N ++ YA+ G + A +F + +K+ VSW ++++ ++ G
Sbjct: 381 MPCRNVASW-----NTMLTGYAQAGMLDEARAIFG--MMPQKDAVSWAAMLAAYSQIGFS 433
Query: 293 KEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGC 352
+E ++ F M + G NR F VL+ C+ +E G+ ++++ + GC
Sbjct: 434 EETLQLFKEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHSRLIKAGYGV------GC 487
Query: 353 -----LIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHG 394
L+ M + G +E+A + E DVV W T++ + HG
Sbjct: 488 FVGNALLAMYFKCGSMEEAHSAFEEM--EERDVVSWNTMIAGYARHG 532
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 78/338 (23%), Positives = 135/338 (39%), Gaps = 85/338 (25%)
Query: 116 VNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFA---------------- 159
+ ++ G + D+ +LF MP R+ T+N M+ G G L A
Sbjct: 114 ITAHMRAGRVPDAERLFAAMPRRSTSTYNTMLAGYAANGRLPQALSFFRSIPRPDSFSYN 173
Query: 160 ---------------RSLFEEMPC-------------------------------RNVVS 173
R+LF+EMP ++ VS
Sbjct: 174 TLLHALGVSSSLADVRALFDEMPVKDSVSYNVMISSHANHGLVSLARHYFDLAPEKDAVS 233
Query: 174 WTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYG 233
W G++ Y R R EA LF TE I+ A++ Q ++ Q +
Sbjct: 234 WNGMLAAYVRNGRIQEARELFDSR-----TEWDAISWNALMAGYVQRSQIEEAQKMFNKM 288
Query: 234 EKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGK 293
+R D+ N ++ YA+ G + A +LF+ + +++ +WT+I+SG+A +GM +
Sbjct: 289 PQR-----DVVSWNTMVSGYARRGDMAEARRLFDVAPI--RDVFTWTAIVSGYAQNGMLE 341
Query: 294 EAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCL 353
EA F M N V++ +++ A ++EE FD M C ++ + +
Sbjct: 342 EAKRVFDAMP----DKNAVSWNAMMAAYVQRRMMEEAKELFDAM--PCR---NVASWNTM 392
Query: 354 IDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACS 391
+ +AG L++A +P + D V W +L A S
Sbjct: 393 LTGYAQAGMLDEARAIFGMMPQK--DAVSWAAMLAAYS 428
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 100/228 (43%), Gaps = 38/228 (16%)
Query: 76 TYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEM 135
++ ++ TCA ++ G QLH+ + K G+ +V AL+ MY G ++++ F+EM
Sbjct: 454 AFACVLSTCADIAALECGMQLHSRLIKAGYGVGCFVGNALLAMYFKCGSMEEAHSAFEEM 513
Query: 136 PERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFR 195
ER++V+WN MI GY R EAL +F
Sbjct: 514 EERDVVSWNTMIA-------------------------------GYARHGFGKEALEVFD 542
Query: 196 KMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGF-TAFDIRVLNCLIDTYA 254
M T+P +IT++ VL A +G V+ + + Y R F A C+ID
Sbjct: 543 TMRKTS-TKPDDITLVGVLAACSHSGLVEK-GISYFYSMHRDFGVATKPEHYTCMIDLLG 600
Query: 255 KCGCIFSASKLFEDISVERKNLVSWTSIISGFAMH---GMGKEAVENF 299
+ G + A L +D+ E + + W +++ +H +G+ A E
Sbjct: 601 RAGRLDEAVNLMKDMPFEPDSTM-WGALLGASRIHRNSELGRNAAEKI 647
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/267 (20%), Positives = 117/267 (43%), Gaps = 23/267 (8%)
Query: 136 PERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFR 195
P+ ++ N IT ++ G + A LF MP R+ ++ ++ GY R +AL+ FR
Sbjct: 103 PDMEVIRRNRAITAHMRAGRVPDAERLFAAMPRRSTSTYNTMLAGYAANGRLPQALSFFR 162
Query: 196 KMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAK 255
+ P + +L A+ + + + + + ++ N +I ++A
Sbjct: 163 SI-----PRPDSFSYNTLLHALGVSSSLADVRALFDEMPVKDSVSY-----NVMISSHAN 212
Query: 256 CGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFL 315
G + A F D++ E K+ VSW +++ + +G +EA E F + + +++
Sbjct: 213 HGLVSLARHYF-DLAPE-KDAVSWNGMLAAYVRNGRIQEARELFDSRTEW----DAISWN 266
Query: 316 SVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPS 375
+++ +EE F+KM + D+ + ++ R G + +A + P
Sbjct: 267 ALMAGYVQRSQIEEAQKMFNKMPQR-----DVVSWNTMVSGYARRGDMAEARRLFDVAP- 320
Query: 376 EITDVVVWRTLLGACSFHGNVEMGERV 402
I DV W ++ + +G +E +RV
Sbjct: 321 -IRDVFTWTAIVSGYAQNGMLEEAKRV 346
>gi|168044807|ref|XP_001774871.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673765|gb|EDQ60283.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 902
Score = 241 bits (614), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 135/406 (33%), Positives = 225/406 (55%), Gaps = 44/406 (10%)
Query: 49 KAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSH 108
+A +Y+++QQ + + P + TY+ ++ C++ + G ++H + + G +
Sbjct: 412 EALTVYQEMQQ------AGVEP--NRVTYTSILNACSSPAALEWGRRIHQQVVEAGLATD 463
Query: 109 VYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPC 168
+V LVNMY G +KD AR +F+ M
Sbjct: 464 AHVGNTLVNMYSMCGSVKD-------------------------------ARQVFDRMIQ 492
Query: 169 RNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQL 228
R++V++ +I GY N EAL LF ++ E +P ++T + +L A +G ++ +
Sbjct: 493 RDIVAYNAMIGGYAAHNLGKEALKLFDRLQE-EGLKPDKVTYINMLNACANSGSLEWARE 551
Query: 229 IHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAM 288
IH K GF + D V N L+ TYAKCG AS +FE ++ ++N++SW +II G A
Sbjct: 552 IHTLVRKGGFFS-DTSVGNALVSTYAKCGSFSDASIVFEKMT--KRNVISWNAIIGGSAQ 608
Query: 289 HGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIK 348
HG G++A++ F RM+ G+KP+ VTF+S+L+ACSH GL+EEG +F M ++ ++P I+
Sbjct: 609 HGRGQDALQLFERMKMEGVKPDIVTFVSLLSACSHAGLLEEGRRYFCSMSQDFAIIPTIE 668
Query: 349 HYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILE 408
HYGC++D+LGRAG+L++AE +P + + +W LLGAC HGNV + ER L+
Sbjct: 669 HYGCMVDLLGRAGQLDEAEALIKTMPFQ-ANTRIWGALLGACRIHGNVPVAERAAESSLK 727
Query: 409 MERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
++ YV + ++ A G + A +LR++M++R K PG S +
Sbjct: 728 LDLDNAVVYVALSHMYAAAGMWDSAAKLRKLMEQRGVTKEPGRSWI 773
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 110/401 (27%), Positives = 185/401 (46%), Gaps = 52/401 (12%)
Query: 41 YSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLGTQLHAVI 100
Y+ + AF ++++++Q +P + TY ++ ++ + G +H+ I
Sbjct: 202 YADCGRSETAFEIFQKMEQ-----EGVVP---NRITYISVLNAFSSPAALKWGKAVHSRI 253
Query: 101 SKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFAR 160
G +S V TALV MY G KD ++F+++ R+L+ WN MI GL + G E A
Sbjct: 254 LNAGHESDTAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGYWEEAS 313
Query: 161 SLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQN 220
++ +M V+ P++IT + +L A +
Sbjct: 314 EVYNQMQREGVM--------------------------------PNKITYVILLNACVNS 341
Query: 221 GDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWT 280
+ + IH K GFT+ DI V N LI Y++CG I A +F+ + RK+++SWT
Sbjct: 342 AALHWGKEIHSRVAKAGFTS-DIGVQNALISMYSRCGSIKDARLVFDKMV--RKDVISWT 398
Query: 281 SIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEE 340
++I G A G G EA+ + MQ+ G++PNRVT+ S+LNACS +E G ++VE
Sbjct: 399 AMIGGLAKSGFGAEALTVYQEMQQAGVEPNRVTYTSILNACSSPAALEWGRRIHQQVVEA 458
Query: 341 CEVLPDIKHYG-CLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMG 399
L H G L++M G ++ A + + D+V + ++G + H +G
Sbjct: 459 G--LATDAHVGNTLVNMYSMCGSVKDARQVFDRMIQR--DIVAYNAMIGGYAAH---NLG 511
Query: 400 ERVTRKILEM-ERGYGGDYVLMYNILAGVGRFGDAERLRRV 439
+ + + E G D V N+L G E R +
Sbjct: 512 KEALKLFDRLQEEGLKPDKVTYINMLNACANSGSLEWAREI 552
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 85/332 (25%), Positives = 155/332 (46%), Gaps = 40/332 (12%)
Query: 73 DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLF 132
+S Y +++ C + G Q+H I + Y AL+NMY+ G ++++ +++
Sbjct: 22 NSSDYMKMLKRCIEVKDLVAGRQVHQHIIQHRTVPDQYTVNALINMYIQCGSIEEARQVW 81
Query: 133 DEMP--ERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEA 190
++ ER + +WN M+ G +++G +E A L +M
Sbjct: 82 KKLSYMERTVHSWNAMVVGYIQYGYIEKALKLLRQM--------------------QQHG 121
Query: 191 LALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLI 250
LA P TI++ L + G ++ + IH + G FD++V NC++
Sbjct: 122 LA------------PDRTTIMSFLSSCKSPGALEWGREIHFQAMQAGLL-FDVKVANCIL 168
Query: 251 DTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPN 310
+ YAKCG I A ++F+ + E+K++VSWT I G+A G + A E F +M++ G+ PN
Sbjct: 169 NMYAKCGSIEEAREVFDKM--EKKSVVSWTITIGGYADCGRSETAFEIFQKMEQEGVVPN 226
Query: 311 RVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTA 370
R+T++SVLNA S ++ G +++ D L+ M + G + +
Sbjct: 227 RITYISVLNAFSSPAALKWGKAVHSRILNAGHE-SDTAVGTALVKMYAKCGSYKDCRQVF 285
Query: 371 LGIPSEITDVVVWRTLLGACSFHGNVEMGERV 402
+ + D++ W T++G + G E V
Sbjct: 286 EKLVNR--DLIAWNTMIGGLAEGGYWEEASEV 315
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 89/169 (52%), Gaps = 5/169 (2%)
Query: 239 TAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVEN 298
T D +N LI+ Y +CG I A ++++ +S + + SW +++ G+ +G ++A++
Sbjct: 54 TVPDQYTVNALINMYIQCGSIEEARQVWKKLSYMERTVHSWNAMVVGYIQYGYIEKALKL 113
Query: 299 FGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNF-FDKMVEECEVLPDIKHYGCLIDML 357
+MQ+ GL P+R T +S L++C G +E G F M + +L D+K C+++M
Sbjct: 114 LRQMQQHGLAPDRTTIMSFLSSCKSPGALEWGREIHFQAM--QAGLLFDVKVANCILNMY 171
Query: 358 GRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKI 406
+ G +E+A + + E VV W +G + G E + +K+
Sbjct: 172 AKCGSIEEAREVFDKM--EKKSVVSWTITIGGYADCGRSETAFEIFQKM 218
>gi|224069701|ref|XP_002303023.1| predicted protein [Populus trichocarpa]
gi|222844749|gb|EEE82296.1| predicted protein [Populus trichocarpa]
Length = 621
Score = 241 bits (614), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 139/394 (35%), Positives = 216/394 (54%), Gaps = 20/394 (5%)
Query: 61 YTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYV 120
Y +S L P DS+ + +++ C G ++H+ + K+G S+ + L+ +Y
Sbjct: 119 YQMINSSLVP--DSYAVTSVLKACGCHLALKEGREVHSQVLKLGLSSNRSIRIKLIELYG 176
Query: 121 SLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDG 180
G +D+ ++FDEMPER++V VMI G ++ V WT +IDG
Sbjct: 177 KCGAFEDARRVFDEMPERDVVASTVMINYYFDHG-------------IKDTVCWTAMIDG 223
Query: 181 YTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTA 240
R SN AL +FR M E P+E+TI+ VL A + G ++ + + Y +K
Sbjct: 224 LVRNGESNRALEVFRNMQR-EDVMPNEVTIVCVLSACSELGALQLGRWVRSYMDKHRIE- 281
Query: 241 FDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFG 300
+ V LI+ Y++CG I A ++FE + + KN++++ S+I GFA+HG EAVE F
Sbjct: 282 LNHFVGGALINMYSRCGDIDEAQRVFEQM--KEKNVITYNSMIMGFALHGKSVEAVELFR 339
Query: 301 RMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRA 360
+ K G P+ VTF+ VLNACSHGGL E G F M ++ + P I+HYGC++D+LGR
Sbjct: 340 GLIKQGFTPSSVTFVGVLNACSHGGLAELGFEIFHSMAKDYGIEPQIEHYGCMVDLLGRL 399
Query: 361 GRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLM 420
GRLE+A + + + D V+ LL AC HGN+E+ ERV + ++ + G Y+L+
Sbjct: 400 GRLEEA-YSFIRMMKVAPDHVMLGALLSACKIHGNLELAERVAKSLVACKNADSGTYILL 458
Query: 421 YNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
N + G++ +A +R M E K PGCS +
Sbjct: 459 SNAYSSSGKWKEAAEVRTNMREEGIEKEPGCSSI 492
>gi|115446651|ref|NP_001047105.1| Os02g0552100 [Oryza sativa Japonica Group]
gi|46389885|dbj|BAD15486.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113536636|dbj|BAF09019.1| Os02g0552100 [Oryza sativa Japonica Group]
gi|125582482|gb|EAZ23413.1| hypothetical protein OsJ_07107 [Oryza sativa Japonica Group]
gi|215712305|dbj|BAG94432.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 586
Score = 241 bits (614), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 131/356 (36%), Positives = 211/356 (59%), Gaps = 8/356 (2%)
Query: 102 KVGFQSHVYVNTALVNMYVSLGFLKDSSK-LFDEMPERNLVTWNVMITGLVKWGELEFAR 160
K G +H V +L+ +Y SLG L + + L+ ++V+WN M++G K G+L AR
Sbjct: 106 KCGALAHPVVTNSLLKLYCSLGLLDRARRVLYSGGAALDVVSWNTMVSGYGKGGDLGAAR 165
Query: 161 SLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQN 220
+F MP RN+VSW+ ++D R EAL +F +M+ E+ P + +++VL A
Sbjct: 166 EVFARMPERNLVSWSAMVDACVRAGEFGEALWVFDRMMREEF-RPDVVVLVSVLKACAHL 224
Query: 221 GDVKSCQLIHGYGEKRGFTAF--DIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVS 278
G V+ + +H Y E F ++ + L+D Y KCGC+ A ++F+ V R+++V
Sbjct: 225 GAVERGRWVHRYLETGSFGGRRGNLMLETALVDMYCKCGCMEDAWQVFD--GVHRRDVVL 282
Query: 279 WTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMV 338
W ++I G AM+G G+ A+E F RM + G PN TF++VL AC+H G V+EG F M
Sbjct: 283 WNAMIGGLAMNGYGERALELFRRMLQKGFMPNESTFIAVLCACTHTGRVDEGKRVFKSM- 341
Query: 339 EECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEM 398
++ + P +HYGCL D+LGRAG +E+AE L +P E W L+ +C H ++ +
Sbjct: 342 QDYGIKPQREHYGCLADLLGRAGNVEEAEALLLDMPME-PHASQWGALMSSCQMHNDINV 400
Query: 399 GERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
GERV ++++E+E GG YV+++N+ A GR+ +A +R++M++R A K G S +
Sbjct: 401 GERVGKRLIELEPYDGGRYVVLFNLYAVNGRWEEARTIRQMMEDRGAKKETGLSFI 456
>gi|242037745|ref|XP_002466267.1| hypothetical protein SORBIDRAFT_01g004770 [Sorghum bicolor]
gi|241920121|gb|EER93265.1| hypothetical protein SORBIDRAFT_01g004770 [Sorghum bicolor]
Length = 537
Score = 241 bits (614), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 138/364 (37%), Positives = 204/364 (56%), Gaps = 6/364 (1%)
Query: 93 GTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVK 152
G +HA+I G V+V+T L+ +Y G L S +LFD MP ++ V+WN M+ ++
Sbjct: 142 GKMVHALIVTSGIVPDVFVSTELIRLYGEYGELLVSRRLFDAMPVKSTVSWNAMVHQYIR 201
Query: 153 WGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEY--TEPSEITI 210
+ A LF MP R+VVSW II GY + R EAL LFR+M++ P+ TI
Sbjct: 202 HSNVGDAYELFLAMPKRDVVSWNTIIAGYCLIGRFMEALELFRQMMSPSSCPVHPNGPTI 261
Query: 211 LAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDIS 270
VL A G +++ +H Y ++ D + LID YAKCG I A ++FE
Sbjct: 262 STVLAACAGAGCLETGIWVHAYIDRNRMND-DGSLDRSLIDMYAKCGSIEKALQVFEKAP 320
Query: 271 VERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEG 330
+R +L SWT++I G AMHG +A+ FG MQ G++P+ VT + VLNAC+HGGLV+EG
Sbjct: 321 GKR-DLYSWTTVICGLAMHGKAADALRMFGMMQDNGIRPDDVTLVGVLNACAHGGLVDEG 379
Query: 331 LNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGAC 390
L+ F + E+ + P I+HYGC+ID+LGR GRL++A + + + V+W L AC
Sbjct: 380 LHHFYSL-EKYAITPKIEHYGCVIDLLGRVGRLQEAYSIIRTMRMK-PNAVIWGAFLNAC 437
Query: 391 SFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPG 450
H NVE+GE ++ ++ V++ ++ A + R RR M+ K PG
Sbjct: 438 KVHSNVELGEIAAAELTRLDPDDPWAKVMLSSLYAKAQDWSSLARERREMNSLQMKKTPG 497
Query: 451 CSLV 454
CS +
Sbjct: 498 CSSI 501
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 82/339 (24%), Positives = 150/339 (44%), Gaps = 33/339 (9%)
Query: 80 LIRTCATLSHPNL---GTQLHAVISKVGF-QSHVYVNTALVNMYVSLGFLKDSSKLFDEM 135
LI++ + + P +H ++ K G + ++ TAL++ Y +LG + + LFDEM
Sbjct: 14 LIKSLSPAAGPRAHLAAAAIHGLLFKEGLLHAGSHLPTALLSAYAALGRPRHARDLFDEM 73
Query: 136 PERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFR 195
P+ LVT M G+ A ++F +M V+ + +
Sbjct: 74 PDPGLVTRTAMARAHAASGQTAQALAVFGDMLADGVLPDNVALAVALAACHGTGSFPAAL 133
Query: 196 KMVACEYTEPSE-----ITILAVLPAIWQNGDVKSCQLIHGYGE-------KRGFTAFDI 243
M A P + I ++P ++ S +LI YGE +R F A +
Sbjct: 134 GMAAAR--RPGKMVHALIVTSGIVPDVFV-----STELIRLYGEYGELLVSRRLFDAMPV 186
Query: 244 RVL---NCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFG 300
+ N ++ Y + + A +LF +++ ++++VSW +II+G+ + G EA+E F
Sbjct: 187 KSTVSWNAMVHQYIRHSNVGDAYELF--LAMPKRDVVSWNTIIAGYCLIGRFMEALELFR 244
Query: 301 RM---QKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDML 357
+M + PN T +VL AC+ G +E G+ + ++ + D LIDM
Sbjct: 245 QMMSPSSCPVHPNGPTISTVLAACAGAGCLETGI-WVHAYIDRNRMNDDGSLDRSLIDMY 303
Query: 358 GRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNV 396
+ G +E+A + P + D+ W T++ + HG
Sbjct: 304 AKCGSIEKALQVFEKAPGK-RDLYSWTTVICGLAMHGKA 341
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/274 (21%), Positives = 113/274 (41%), Gaps = 43/274 (15%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+NT++ Y L +A L++Q+ + S P+ P + T S ++ CA G
Sbjct: 223 WNTIIAGYCLIGRFMEALELFRQMM---SPSSCPVHP--NGPTISTVLAACAGAGCLETG 277
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMP-ERNLVTWNVMITGLVK 152
+HA I + ++ +L++MY G ++ + ++F++ P +R+L +W +I GL
Sbjct: 278 IWVHAYIDRNRMNDDGSLDRSLIDMYAKCGSIEKALQVFEKAPGKRDLYSWTTVICGLAM 337
Query: 153 WGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILA 212
G ++ +AL +F M+ P ++T++
Sbjct: 338 HG-------------------------------KAADALRMF-GMMQDNGIRPDDVTLVG 365
Query: 213 VLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVE 272
VL A G V L H Y ++ I C+ID + G + A + + +
Sbjct: 366 VLNACAHGGLVDE-GLHHFYSLEKYAITPKIEHYGCVIDLLGRVGRLQEAYSIIRTMRM- 423
Query: 273 RKNLVSWTSIISGFAMHG---MGKEAVENFGRMQ 303
+ N V W + ++ +H +G+ A R+
Sbjct: 424 KPNAVIWGAFLNACKVHSNVELGEIAAAELTRLD 457
>gi|357138796|ref|XP_003570973.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g56310-like [Brachypodium distachyon]
Length = 472
Score = 241 bits (614), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 155/423 (36%), Positives = 224/423 (52%), Gaps = 50/423 (11%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
FN+L+ A P+ A L+ Q+ H +P D++T+ FLI C+ S P L
Sbjct: 92 FNSLIR----ASPPRIALRLFGQMH------HRDVPA--DTYTFPFLIHACSG-SDPPLC 138
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
LH +VG+ SH++ TAL+NMY G
Sbjct: 139 ESLHGQSIRVGYSSHLFTQTALMNMYFVCGLAAP-------------------------- 172
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMV-ACEYTEPSEITILA 212
AR +F+EM R+VV WTG++ GY EA+ +F++M E P+ TI++
Sbjct: 173 -----ARRVFDEMQARDVVVWTGMVSGYVDTGMHLEAVEVFQEMRRGEEVASPNVATIVS 227
Query: 213 VLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVE 272
V A G ++ + +HGY EK GF + D+ V N L+D Y KCG + SA LF +
Sbjct: 228 VASACAGLGSLEYAKWLHGYVEKLGFGS-DLIVTNALMDMYGKCGGVESARALFN--LMH 284
Query: 273 RKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLN 332
K+L SWT+IISG A HG KE + F MQK+G+ P+ TF+ VL+ACSH GLV+EG+
Sbjct: 285 EKDLHSWTTIISGLASHGHVKEGLALFSSMQKMGVLPDSTTFIVVLSACSHAGLVDEGMC 344
Query: 333 FFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSF 392
F+ M + +V PDIKHYGC++D+ RAG L +A + +P + ++ + LL ACS
Sbjct: 345 IFNSMESKYKVTPDIKHYGCMVDLFSRAGLLSRAFQLIDSMPFD-PNLAILGALLSACSI 403
Query: 393 HGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAF-KVPGC 451
+ +E+GE V +KI + GG VL+ NI A + + + LRR + F K PG
Sbjct: 404 NNELEIGELVLKKIESVCSYKGGANVLLSNIYANQNLWHEVDSLRRKIRNEATFRKPPGQ 463
Query: 452 SLV 454
SLV
Sbjct: 464 SLV 466
>gi|347954488|gb|AEP33744.1| chloroplast biogenesis 19, partial [Aethionema grandiflorum]
Length = 413
Score = 241 bits (614), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 140/383 (36%), Positives = 214/383 (55%), Gaps = 9/383 (2%)
Query: 76 TYSFLIRTCATL--SHPNLGTQLHAVISKVGF-QSHVYVNTALVNMYVSLGFLKDSSKLF 132
T+ LI C LG LH K+G ++HV V TA++ MY + +F
Sbjct: 19 TFIALISGCGDFPTGSETLGDLLHGYACKLGLDRTHVMVGTAILGMYSKRCRFGKARCVF 78
Query: 133 DEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALA 192
D M ++N VTWN MI ++ G+++ A LF+EMP +++SWT +I+G+ + EAL
Sbjct: 79 DYMEDKNSVTWNTMIDAYMRSGKVDRAVKLFDEMPDPDLISWTAMINGFVKKGFHEEALV 138
Query: 193 LFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDT 252
FR+M +P + I+A L A G + +H Y + F ++RV N LID
Sbjct: 139 WFREM-QISGVKPDYVAIIAALAACTNLGALSFGLWVHRYVLSQDFKN-NVRVNNSLIDL 196
Query: 253 YAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRV 312
Y +CGC+ A ++F+ + E++ +VSW S+I G A +G E++ F +MQ+ G P+ V
Sbjct: 197 YCRCGCVEFAREVFDKM--EKRTVVSWNSVIVGSAANGNAHESLVYFRKMQEEGFNPDAV 254
Query: 313 TFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALG 372
TF L ACSH GLVEEG+ +F M + ++ P I+HYGCL+D+ RAGRLE A K
Sbjct: 255 TFTGALTACSHVGLVEEGIQYFQTMKRDYKISPRIEHYGCLVDLYSRAGRLEDALKLVQS 314
Query: 373 IPSEITDVVVWRTLLGACSFHG-NVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFG 431
+ + +VV+ +LL AC HG N E+ ER+ + + EM +YV++ N+ A G++
Sbjct: 315 MSMKPNEVVI-GSLLAACRTHGNNTELAERLMKHLSEMNVKGHSNYVILSNMYAADGKWE 373
Query: 432 DAERLRRVMDERNAFKVPGCSLV 454
A ++RR M K PG S +
Sbjct: 374 GAXKMRRKMKGLGLKKQPGFSSI 396
>gi|326489701|dbj|BAK01831.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 484
Score = 241 bits (614), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 138/392 (35%), Positives = 217/392 (55%), Gaps = 8/392 (2%)
Query: 66 SPLPPLFDSFTYSFLIRTCATLSHPNLG---TQLHAVISKVGFQSHVYVNTALVNMYVSL 122
SP P + T ++ CA L ++ F SH+ + T L Y++
Sbjct: 60 SPAAPAPNDVTLLTVLSACAGAPSSPLARPLALSLHALAAKLFPSHLLLCTCLARFYLAS 119
Query: 123 GFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYT 182
+ +LF M R+LVT+N MITGL++ G + AR +F+ MP + VSWT +IDG
Sbjct: 120 RLPHLALQLFGSMTVRSLVTYNTMITGLMRNGLVAAAREVFDGMPEPDKVSWTALIDGCV 179
Query: 183 RMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFD 242
+ R +EA+ F M+ + EP +T++A + A + G + +H + +
Sbjct: 180 KNGRHDEAIDCFHAML-LDGVEPDYVTLVAAISACAEVGALGLGMWVHRLVTRERLEG-N 237
Query: 243 IRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRM 302
IR+ N LID YA+CG + A ++F+ S+ + +VSW S+I GFA +G +A+E+F M
Sbjct: 238 IRIANSLIDMYARCGQVEFARQVFD--SMRNRTVVSWNSMIVGFAANGRCTDAIEHFEAM 295
Query: 303 QKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGR 362
++ G +P+ VTF VL ACSH GL +EGL ++ M E + ++HYGC++D+LGRAGR
Sbjct: 296 RRKGFRPDAVTFTGVLTACSHAGLTDEGLRYYKAMRAEHGITARMEHYGCVVDLLGRAGR 355
Query: 363 LEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYN 422
L +A +P +VV+ LL C HG+V+M E++ + +LE + G +YVL+ N
Sbjct: 356 LGEAMSVVATMPMRPNEVVLG-ALLAGCRMHGDVDMAEQLMQHLLEQDPGGDSNYVLLSN 414
Query: 423 ILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
I A G++ A ++R +M R K PG S V
Sbjct: 415 IYAATGKWDGAGKVRGLMKARGVKKRPGRSAV 446
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 70/300 (23%), Positives = 123/300 (41%), Gaps = 49/300 (16%)
Query: 170 NVVSWTGIIDGYTRM-NRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQ- 227
+VVSWT I R + A AL + + P+++T+L VL A +
Sbjct: 30 DVVSWTAAIARPAREGDLPATAAALSAMLSSPAAPAPNDVTLLTVLSACAGAPSSPLARP 89
Query: 228 ----------------------LIHGYGEKR-------GFTAFDIRVL---NCLIDTYAK 255
L Y R F + +R L N +I +
Sbjct: 90 LALSLHALAAKLFPSHLLLCTCLARFYLASRLPHLALQLFGSMTVRSLVTYNTMITGLMR 149
Query: 256 CGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFL 315
G + +A ++F+ + K VSWT++I G +G EA++ F M G++P+ VT +
Sbjct: 150 NGLVAAAREVFDGMPEPDK--VSWTALIDGCVKNGRHDEAIDCFHAMLLDGVEPDYVTLV 207
Query: 316 SVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPS 375
+ ++AC+ G + G+ + ++V + +I+ LIDM R G++E A + + +
Sbjct: 208 AAISACAEVGALGLGM-WVHRLVTRERLEGNIRIANSLIDMYARCGQVEFARQVFDSMRN 266
Query: 376 EITDVVVWRTLLGACSFHGNVEMGERVTRKILEME----RGYGGDYVLMYNILAGVGRFG 431
VV W +++ + +G R T I E +G+ D V +L G
Sbjct: 267 RT--VVSWNSMIVGFAANG------RCTDAIEHFEAMRRKGFRPDAVTFTGVLTACSHAG 318
>gi|297848568|ref|XP_002892165.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338007|gb|EFH68424.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 429
Score = 241 bits (614), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 141/407 (34%), Positives = 223/407 (54%), Gaps = 14/407 (3%)
Query: 48 QKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQS 107
++A L++Q+ HS LP D+ +S +++CA HP LG +HA K F S
Sbjct: 29 EQALTLFRQM-----HSSFALP--LDAHVFSLALKSCAAAFHPVLGGSVHAHSVKSNFLS 81
Query: 108 HVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMP 167
+ +V AL++MY + + KLFDE+P+RN V WN MI+ G+++ A L+E M
Sbjct: 82 NPFVGCALLDMYGKCLSVTHARKLFDEIPQRNAVVWNAMISHYTHCGKIQEAVELYEAMD 141
Query: 168 CR-NVVSWTGIIDGYTRM-NRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKS 225
N S+ II G+ + S +A+ +RKM+ + +P+ IT+LA++ A G +
Sbjct: 142 VMPNESSFNAIIKGFVGTEDGSYKAIEFYRKMIDFRF-KPNLITLLALVSACSAIGAFRL 200
Query: 226 CQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISG 285
+ IH Y R ++ + L++ Y +CGCI +FE S+ +++V+W+S+IS
Sbjct: 201 IKEIHSYA-FRNLIEPHPQLKSGLVEAYGRCGCIVYVQLVFE--SMTDRDVVAWSSLISA 257
Query: 286 FAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLP 345
+A+HG + A+ F M+ + P+ + FL+VL ACSH GL +E L +F +M + +
Sbjct: 258 YALHGDAESALRTFQEMESAKVTPDDIAFLNVLKACSHAGLADEALLYFKRMQGDYGLRA 317
Query: 346 DIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRK 405
HY CL+D+L R GR E+A K +P + T W LLGAC +G VE+ E ++
Sbjct: 318 SRDHYSCLVDVLSRVGRFEEAYKVIQAMPEKPT-AKTWGALLGACRNYGEVELAEIAAKE 376
Query: 406 ILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCS 452
+ ++E +YVL+ I VGR +AERLR M E PG S
Sbjct: 377 LWKIEPENPANYVLLGKIYMSVGRQEEAERLRMEMKESGVKVSPGSS 423
>gi|414587316|tpg|DAA37887.1| TPA: hypothetical protein ZEAMMB73_488455 [Zea mays]
Length = 622
Score = 241 bits (614), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 149/464 (32%), Positives = 226/464 (48%), Gaps = 69/464 (14%)
Query: 53 LYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVN 112
L+ L + + LP DSF++ L+R CA +S G LHA ++G + +++
Sbjct: 164 LHAALTEFNLLRQAALP---DSFSFPCLLRACARVSCLPAGRALHAAAIRLGVHADLFIR 220
Query: 113 TALVNMY-------------------------------VSLGFLKDSSKLFDEMPERNLV 141
TAL+ Y V+ G + D+ LFD MP+RN+V
Sbjct: 221 TALIQFYGRCGVADAARALFYQIDIPSEVSWTAIIVAYVNNGGIIDARALFDTMPQRNVV 280
Query: 142 TWNVMITGLVKWGELEFARSLFEEMP------C-------------------------RN 170
WNVM+ G VK G+LE AR LF+EMP C R+
Sbjct: 281 HWNVMVDGYVKCGDLEGARRLFDEMPERTATACTSLIGGYAKAGNMEAARLLFDKLEDRD 340
Query: 171 VVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIH 230
V SW+ +I GY + EAL F + + P E+ ++ ++ A Q G+++ I
Sbjct: 341 VFSWSAMISGYAQNGYPGEALRTFDEFQG-QGIHPDELVVVGLMSACSQLGNIRLASWIE 399
Query: 231 GYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHG 290
Y K + VL L++ AKCG + A+ LFE + V +++ S+ S++ G+ +HG
Sbjct: 400 DYITKYSIDMNNAHVLAGLVNMNAKCGNLERATFLFESMPV--RDVFSYCSLMQGYCLHG 457
Query: 291 MGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHY 350
+AV+ F RM GL P+ F VL AC H GLVEEG FFD M ++P +HY
Sbjct: 458 SADKAVKLFSRMLLEGLTPDNAVFTIVLTACCHAGLVEEGKKFFDIMKNVYLMVPSGEHY 517
Query: 351 GCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEME 410
CL+++LGR G LE A + +P + W LLG C H N+E+G+ +K+ E+E
Sbjct: 518 ACLVNLLGRCGMLEDAYWLIMSMPGK-PHPGAWGALLGGCKLHCNIELGKIAAKKLFEIE 576
Query: 411 RGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
G+YV + N+ A + R+GD +R M + K+ G +LV
Sbjct: 577 PDNAGNYVSLSNMYANIDRWGDVSEVRAEMTGKRITKIAGRTLV 620
>gi|75273443|sp|Q9LIQ7.1|PP252_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g24000, mitochondrial; Flags: Precursor
gi|9294669|dbj|BAB03018.1| unnamed protein product [Arabidopsis thaliana]
Length = 633
Score = 240 bits (613), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 151/464 (32%), Positives = 238/464 (51%), Gaps = 67/464 (14%)
Query: 17 IHSHLLTTNSLLHHSQLF-NTLLHFY----SLAES-------PQKAFLLYKQLQQIYTHS 64
+H+H+L S+ H + NTLL+ Y SL E+ PQ+ F+ + L Y+
Sbjct: 82 VHAHIL--QSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQH 139
Query: 65 HSPLPPLF------------DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVN 112
P L + FT S +I+ A G QLH K GF S+V+V
Sbjct: 140 DRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVG 199
Query: 113 TALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVV 172
+AL+++Y G + D+ +FD + RN V
Sbjct: 200 SALLDLYTRYGLMDDAQLVFDALES-------------------------------RNDV 228
Query: 173 SWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGY 232
SW +I G+ R + + +AL LF+ M+ + PS + ++ A G ++ + +H Y
Sbjct: 229 SWNALIAGHARRSGTEKALELFQGMLRDGF-RPSHFSYASLFGACSSTGFLEQGKWVHAY 287
Query: 233 GEKRG--FTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHG 290
K G AF N L+D YAK G I A K+F+ ++ ++++VSW S+++ +A HG
Sbjct: 288 MIKSGEKLVAF---AGNTLLDMYAKSGSIHDARKIFDRLA--KRDVVSWNSLLTAYAQHG 342
Query: 291 MGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHY 350
GKEAV F M++VG++PN ++FLSVL ACSH GL++EG ++++ M ++ ++P+ HY
Sbjct: 343 FGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDG-IVPEAWHY 401
Query: 351 GCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEME 410
++D+LGRAG L +A + +P E T +W+ LL AC H N E+G + E++
Sbjct: 402 VTVVDLLGRAGDLNRALRFIEEMPIEPT-AAIWKALLNACRMHKNTELGAYAAEHVFELD 460
Query: 411 RGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
G +V++YNI A GR+ DA R+R+ M E K P CS V
Sbjct: 461 PDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKKEPACSWV 504
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 94/341 (27%), Positives = 163/341 (47%), Gaps = 45/341 (13%)
Query: 73 DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLF 132
D Y+ L++ C G +HA I + F+ + + L+NMY G L+++ K+F
Sbjct: 59 DRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVF 118
Query: 133 DEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALA 192
++MP+R+ VTW T +I GY++ +R +AL
Sbjct: 119 EKMPQRDFVTW-------------------------------TTLISGYSQHDRPCDALL 147
Query: 193 LFRKMVACEYTEPSEITILAVLPAIWQNGDVKSC--QLIHGYGEKRGFTAFDIRVLNCLI 250
F +M+ Y+ P+E T+ +V+ A + + C +HG+ K GF + ++ V + L+
Sbjct: 148 FFNQMLRFGYS-PNEFTLSSVIKA--AAAERRGCCGHQLHGFCVKCGFDS-NVHVGSALL 203
Query: 251 DTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPN 310
D Y + G + A +F+ ++E +N VSW ++I+G A ++A+E F M + G +P+
Sbjct: 204 DLYTRYGLMDDAQLVFD--ALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPS 261
Query: 311 RVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTA 370
++ S+ ACS G +E+G M++ E L L+DM ++G + A K
Sbjct: 262 HFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAG-NTLLDMYAKSGSIHDARKIF 320
Query: 371 LGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMER 411
+ DVV W +LL A + HG G+ EM R
Sbjct: 321 DRLAKR--DVVSWNSLLTAYAQHG---FGKEAVWWFEEMRR 356
>gi|225458036|ref|XP_002280360.1| PREDICTED: pentatricopeptide repeat-containing protein At1g25360
[Vitis vinifera]
Length = 799
Score = 240 bits (613), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 135/392 (34%), Positives = 217/392 (55%), Gaps = 19/392 (4%)
Query: 72 FDSFTYSFLIRTCATLSHPNLGTQLHAVI----SKVGFQSHVYVNTALVNMYVSLGFLKD 127
+D FTY+ ++ CA G Q+HA I + + VN AL +Y G + +
Sbjct: 289 WDEFTYTSVLSACANAGFFLHGKQVHAYILRTEPRPSLDFSLSVNNALATLYWKCGKVDE 348
Query: 128 SSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRS 187
+ ++F++MP ++LV+WN +++G V G ++ A+S FEEMP RN+++WT +I G +
Sbjct: 349 ARQVFNQMPVKDLVSWNAILSGYVNAGRIDEAKSFFEEMPERNLLTWTVMISGLAQNGFG 408
Query: 188 NEALALFRKMVA-----CEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFD 242
E+L LF +M + C+Y I A L A+ +G QL+ + GF +
Sbjct: 409 EESLKLFNRMKSEGFEPCDYAFAGAIIACAWLAAL-MHGRQLHAQLV-----RLGFDS-S 461
Query: 243 IRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRM 302
+ N LI YAKCG + +A LF +++ + VSW ++I+ HG G +A+E F M
Sbjct: 462 LSAGNALITMYAKCGVVEAAHCLF--LTMPYLDSVSWNAMIAALGQHGHGAQALELFELM 519
Query: 303 QKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGR 362
K + P+R+TFL+VL+ CSH GLVEEG +F M + P HY +ID+L RAG+
Sbjct: 520 LKEDILPDRITFLTVLSTCSHAGLVEEGHRYFKSMSGLYGICPGEDHYARMIDLLCRAGK 579
Query: 363 LEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYN 422
+A+ +P E +W LL C HGN+++G + ++ E+ + G YVL+ N
Sbjct: 580 FSEAKDMIETMPVE-PGPPIWEALLAGCRIHGNMDLGIQAAERLFELMPQHDGTYVLLSN 638
Query: 423 ILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
+ A VGR+ D ++R++M ++ K PGCS +
Sbjct: 639 MYATVGRWDDVAKVRKLMRDKGVKKEPGCSWI 670
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 137/529 (25%), Positives = 215/529 (40%), Gaps = 99/529 (18%)
Query: 2 HILQNSQTPNNI--TTQIHSHLLTTNSLLHHSQLFNTLLHFYSLAESPQKAFLLYKQLQQ 59
H+ + P+ + TT I +H NS L F T L + + Y +
Sbjct: 71 HLFDEIRQPDIVARTTLIAAHSSAGNSNLAREIFFATPLGI--------RDTVCYNAMIT 122
Query: 60 IYTHSHSPLPP--LF----------DSFTYSFLIRTCATL-SHPNLGTQLHAVISKVGFQ 106
Y+H++ LF D+FT++ ++ A + Q+H + K G
Sbjct: 123 GYSHNNDGFGAIELFRDLLRNGFRPDNFTFTSVLGALALIVEDEKQCQQIHCAVVKSGSG 182
Query: 107 SHVYVNTALVNMYVSLGF---------LKDSSKLFDEMPERNLVTWNVMITGLVKWGELE 157
V AL++++V + + KLFDEM ER+ ++W MI G V+ GEL+
Sbjct: 183 FVTSVLNALLSVFVKCASSPLVSSSSLMAAARKLFDEMTERDELSWTTMIAGYVRNGELD 242
Query: 158 FARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAI 217
AR + M + VV+W +I GY EAL +FRKM + E T +VL A
Sbjct: 243 AARQFLDGMTEKLVVAWNAMISGYVHHGFFLEALEMFRKMYLLG-IQWDEFTYTSVLSAC 301
Query: 218 WQNGDVKSCQLIHGY---GEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVE-- 272
G + +H Y E R F + V N L Y KCG + A ++F + V+
Sbjct: 302 ANAGFFLHGKQVHAYILRTEPRPSLDFSLSVNNALATLYWKCGKVDEARQVFNQMPVKDL 361
Query: 273 ---------------------------RKNLVSWTSIISGFAMHGMGKEAVENFGRMQKV 305
+NL++WT +ISG A +G G+E+++ F RM+
Sbjct: 362 VSWNAILSGYVNAGRIDEAKSFFEEMPERNLLTWTVMISGLAQNGFGEESLKLFNRMKSE 421
Query: 306 GLKPNRVTFLSVLNACS-----------HGGLVEEGL-------NFFDKMVEECEVLP-- 345
G +P F + AC+ H LV G N M +C V+
Sbjct: 422 GFEPCDYAFAGAIIACAWLAALMHGRQLHAQLVRLGFDSSLSAGNALITMYAKCGVVEAA 481
Query: 346 ----------DIKHYGCLIDMLGRAGRLEQA-EKTALGIPSEI-TDVVVWRTLLGACSFH 393
D + +I LG+ G QA E L + +I D + + T+L CS
Sbjct: 482 HCLFLTMPYLDSVSWNAMIAALGQHGHGAQALELFELMLKEDILPDRITFLTVLSTCSHA 541
Query: 394 GNVEMGERVTRKILEMERGYGGD--YVLMYNILAGVGRFGDAERLRRVM 440
G VE G R + + + G+ Y M ++L G+F +A+ + M
Sbjct: 542 GLVEEGHRYFKSMSGLYGICPGEDHYARMIDLLCRAGKFSEAKDMIETM 590
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 86/352 (24%), Positives = 153/352 (43%), Gaps = 50/352 (14%)
Query: 91 NLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGL 150
++ +HA + GF+ Y+ L+++Y L + LFDE+ + ++V +I
Sbjct: 32 SIARTVHAHMIASGFKPRGYILNRLIDVYCKSSDLVSAHHLFDEIRQPDIVARTTLIAAH 91
Query: 151 VKWGELEFARSLFEEMP--CRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEI 208
G AR +F P R+ V + +I GY+ N A+ LFR ++ + P
Sbjct: 92 SSAGNSNLAREIFFATPLGIRDTVCYNAMITGYSHNNDGFGAIELFRDLLRNGF-RPDNF 150
Query: 209 TILAVLPAI-WQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCG---------C 258
T +VL A+ D K CQ IH K G + F VLN L+ + KC
Sbjct: 151 TFTSVLGALALIVEDEKQCQQIHCAVVKSG-SGFVTSVLNALLSVFVKCASSPLVSSSSL 209
Query: 259 IFSASKLFEDIS-----------------------------VERKNLVSWTSIISGFAMH 289
+ +A KLF++++ + K +V+W ++ISG+ H
Sbjct: 210 MAAARKLFDEMTERDELSWTTMIAGYVRNGELDAARQFLDGMTEKLVVAWNAMISGYVHH 269
Query: 290 GMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKH 349
G EA+E F +M +G++ + T+ SVL+AC++ G G ++ E P +
Sbjct: 270 GFFLEALEMFRKMYLLGIQWDEFTYTSVLSACANAGFFLHGKQVHAYILRT-EPRPSLDF 328
Query: 350 Y----GCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVE 397
L + + G++++A + +P + D+V W +L G ++
Sbjct: 329 SLSVNNALATLYWKCGKVDEARQVFNQMP--VKDLVSWNAILSGYVNAGRID 378
>gi|413943774|gb|AFW76423.1| hypothetical protein ZEAMMB73_944105 [Zea mays]
Length = 446
Score = 240 bits (613), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 137/388 (35%), Positives = 216/388 (55%), Gaps = 10/388 (2%)
Query: 73 DSFTYSFLIRTCATLSHPNLGTQLHA-VISKVGFQSHVYVNTALVNMYVSLGFLKDSSKL 131
D T S ++ CA L+ G Q+HA ++ + + + +N ALV+MY G ++ +
Sbjct: 9 DEVTLSSVMSACAGLAAEREGRQVHAHMVKRDRLRDDMVLNNALVDMYAKCGRTWEARCI 68
Query: 132 FDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEAL 191
FD MP R++V+ ++ G K +E A+ +F +M +NV++W +I Y + EA+
Sbjct: 69 FDSMPSRSVVSETSILAGYAKSANVEDAQVVFSQMVEKNVIAWNVLIAAYAQNGEEEEAI 128
Query: 192 ALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGF-----TAFDIRVL 246
LF ++ + P+ T VL A ++ Q H + K GF D+ V
Sbjct: 129 RLFVQLKR-DSIWPTHYTYGNVLNACGNIAVLQLGQQAHVHVLKEGFRFDFGPESDVFVG 187
Query: 247 NCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVG 306
N L+D Y K G I +K+FE ++ ++ VSW ++I G+A +G K+A+ F RM
Sbjct: 188 NSLVDMYLKTGSIDDGAKVFERMAA--RDNVSWNAMIVGYAQNGRAKDALHLFERMLCSN 245
Query: 307 LKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQA 366
P+ VT + VL+AC H GLV+EG F M E+ + P HY C++D+LGRAG L++A
Sbjct: 246 ENPDSVTMIGVLSACGHSGLVDEGRRHFHFMTEDHGITPSRDHYTCMVDLLGRAGHLKEA 305
Query: 367 EKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAG 426
E+ +P+E D V+W +LLGAC H NVE+GER ++ E++ G YVL+ N+ A
Sbjct: 306 EELIKDMPTE-PDSVLWASLLGACRLHKNVELGERTAGRLFELDPENSGPYVLLSNMYAE 364
Query: 427 VGRFGDAERLRRVMDERNAFKVPGCSLV 454
+G++ D R+RR M +R K PGCS +
Sbjct: 365 MGKWADVFRVRRSMKDRGVSKQPGCSWI 392
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 116/268 (43%), Gaps = 38/268 (14%)
Query: 205 PSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCG------C 258
P E+T+ +V+ A + + +H + KR D+ + N L+D YAKCG C
Sbjct: 8 PDEVTLSSVMSACAGLAAEREGRQVHAHMVKRDRLRDDMVLNNALVDMYAKCGRTWEARC 67
Query: 259 IFSA------------------SKLFEDISV-----ERKNLVSWTSIISGFAMHGMGKEA 295
IF + S ED V KN+++W +I+ +A +G +EA
Sbjct: 68 IFDSMPSRSVVSETSILAGYAKSANVEDAQVVFSQMVEKNVIAWNVLIAAYAQNGEEEEA 127
Query: 296 VENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEEC---EVLP--DIKHY 350
+ F ++++ + P T+ +VLNAC + +++ G +++E + P D+
Sbjct: 128 IRLFVQLKRDSIWPTHYTYGNVLNACGNIAVLQLGQQAHVHVLKEGFRFDFGPESDVFVG 187
Query: 351 GCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEME 410
L+DM + G ++ K + + D V W ++ + +G + + ++L
Sbjct: 188 NSLVDMYLKTGSIDDGAKVFERMAAR--DNVSWNAMIVGYAQNGRAKDALHLFERMLCSN 245
Query: 411 RGYGGDYVLMYNILAGVGRFGDAERLRR 438
D V M +L+ G G + RR
Sbjct: 246 E--NPDSVTMIGVLSACGHSGLVDEGRR 271
Score = 42.0 bits (97), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 61/139 (43%), Gaps = 10/139 (7%)
Query: 302 MQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAG 361
M G P+ VT SV++AC+ EG MV+ + D+ L+DM + G
Sbjct: 1 MMATGFFPDEVTLSSVMSACAGLAAEREGRQVHAHMVKRDRLRDDMVLNNALVDMYAKCG 60
Query: 362 RLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMY 421
R +A +PS VV ++L + NVE + V +++E V+ +
Sbjct: 61 RTWEARCIFDSMPSR--SVVSETSILAGYAKSANVEDAQVVFSQMVEKN-------VIAW 111
Query: 422 NIL-AGVGRFGDAERLRRV 439
N+L A + G+ E R+
Sbjct: 112 NVLIAAYAQNGEEEEAIRL 130
>gi|240255401|ref|NP_189042.4| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332643322|gb|AEE76843.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 665
Score = 240 bits (613), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 151/464 (32%), Positives = 238/464 (51%), Gaps = 67/464 (14%)
Query: 17 IHSHLLTTNSLLHHSQLF-NTLLHFY----SLAES-------PQKAFLLYKQLQQIYTHS 64
+H+H+L S+ H + NTLL+ Y SL E+ PQ+ F+ + L Y+
Sbjct: 82 VHAHIL--QSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQH 139
Query: 65 HSPLPPLF------------DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVN 112
P L + FT S +I+ A G QLH K GF S+V+V
Sbjct: 140 DRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVG 199
Query: 113 TALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVV 172
+AL+++Y G + D+ +FD + RN V
Sbjct: 200 SALLDLYTRYGLMDDAQLVFDALES-------------------------------RNDV 228
Query: 173 SWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGY 232
SW +I G+ R + + +AL LF+ M+ + PS + ++ A G ++ + +H Y
Sbjct: 229 SWNALIAGHARRSGTEKALELFQGMLRDGF-RPSHFSYASLFGACSSTGFLEQGKWVHAY 287
Query: 233 GEKRG--FTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHG 290
K G AF N L+D YAK G I A K+F+ ++ ++++VSW S+++ +A HG
Sbjct: 288 MIKSGEKLVAF---AGNTLLDMYAKSGSIHDARKIFDRLA--KRDVVSWNSLLTAYAQHG 342
Query: 291 MGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHY 350
GKEAV F M++VG++PN ++FLSVL ACSH GL++EG ++++ M ++ ++P+ HY
Sbjct: 343 FGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDG-IVPEAWHY 401
Query: 351 GCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEME 410
++D+LGRAG L +A + +P E T +W+ LL AC H N E+G + E++
Sbjct: 402 VTVVDLLGRAGDLNRALRFIEEMPIEPT-AAIWKALLNACRMHKNTELGAYAAEHVFELD 460
Query: 411 RGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
G +V++YNI A GR+ DA R+R+ M E K P CS V
Sbjct: 461 PDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKKEPACSWV 504
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 90/324 (27%), Positives = 158/324 (48%), Gaps = 42/324 (12%)
Query: 73 DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLF 132
D Y+ L++ C G +HA I + F+ + + L+NMY G L+++ K+F
Sbjct: 59 DRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVF 118
Query: 133 DEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALA 192
++MP+R+ VTW T +I GY++ +R +AL
Sbjct: 119 EKMPQRDFVTW-------------------------------TTLISGYSQHDRPCDALL 147
Query: 193 LFRKMVACEYTEPSEITILAVLPAIWQNGDVKSC--QLIHGYGEKRGFTAFDIRVLNCLI 250
F +M+ Y+ P+E T+ +V+ A + + C +HG+ K GF + ++ V + L+
Sbjct: 148 FFNQMLRFGYS-PNEFTLSSVIKA--AAAERRGCCGHQLHGFCVKCGFDS-NVHVGSALL 203
Query: 251 DTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPN 310
D Y + G + A +F+ ++E +N VSW ++I+G A ++A+E F M + G +P+
Sbjct: 204 DLYTRYGLMDDAQLVFD--ALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPS 261
Query: 311 RVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTA 370
++ S+ ACS G +E+G M++ E L L+DM ++G + A K
Sbjct: 262 HFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAG-NTLLDMYAKSGSIHDARKIF 320
Query: 371 LGIPSEITDVVVWRTLLGACSFHG 394
+ DVV W +LL A + HG
Sbjct: 321 DRLAKR--DVVSWNSLLTAYAQHG 342
>gi|297824259|ref|XP_002880012.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297325851|gb|EFH56271.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 542
Score = 240 bits (613), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 146/422 (34%), Positives = 227/422 (53%), Gaps = 11/422 (2%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNL 92
++NT++ +S + P+ A ++ + S S P TY + + A+L
Sbjct: 91 VWNTIIRGFSRSSFPEMAISIFIDM---LCSSPSVKP---QRLTYPSVFKAYASLGLARD 144
Query: 93 GTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVK 152
G QLH + K G + ++ +++MYV+ G L ++ +LF M ++V WN +I GL K
Sbjct: 145 GRQLHGRVIKEGLEDDSFIRNTMLHMYVTCGCLVEAWRLFVGMMGFDVVAWNSIIMGLAK 204
Query: 153 WGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILA 212
G ++ A+ LF+EMP RN VSW +I G+ R R +AL +FR+M + +P T+++
Sbjct: 205 CGLIDQAQKLFDEMPQRNGVSWNSMISGFVRNGRFKDALEMFREMQERD-VKPDGFTMVS 263
Query: 213 VLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVE 272
+L A G + + IH Y + F I V+ LID Y KCGC K+FE
Sbjct: 264 LLNACAYLGASEQGRWIHKYIVRNRFELNSI-VITALIDMYCKCGCFEEGLKVFE--CAP 320
Query: 273 RKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLN 332
K L W S+I G A +G + A++ F +++ GL+P+ V+F+ VL AC+H G V +
Sbjct: 321 TKQLSCWNSMILGLANNGCEERAMDLFLELERTGLEPDSVSFIGVLTACAHSGEVHKAGE 380
Query: 333 FFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSF 392
FF M E+ + P IKHY C++++LG AG L++AE +P E D ++W +LL AC
Sbjct: 381 FFRLMREKYMIEPSIKHYTCMVNVLGGAGLLDEAEALIKKMPVE-GDTIIWSSLLAACRK 439
Query: 393 HGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCS 452
+GNVEM +R + ++ YVLM N A G F +A R +M ER K GCS
Sbjct: 440 NGNVEMAKRAANCLKNLDPDETCGYVLMSNAYASYGLFEEAVEQRLLMKERQMEKEVGCS 499
Query: 453 LV 454
+
Sbjct: 500 SI 501
>gi|242083462|ref|XP_002442156.1| hypothetical protein SORBIDRAFT_08g015260 [Sorghum bicolor]
gi|241942849|gb|EES15994.1| hypothetical protein SORBIDRAFT_08g015260 [Sorghum bicolor]
Length = 557
Score = 240 bits (613), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 139/414 (33%), Positives = 215/414 (51%), Gaps = 36/414 (8%)
Query: 70 PLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSS 129
P ++FT S ++R C+ L G Q+H + G +V ALV+MY SLG + D+
Sbjct: 113 PRPNAFTASSVVRCCSALRAVREGIQVHGFLFSAGLGRASHVGAALVDMYGSLGRVADAR 172
Query: 130 KLFDEMP-------------------------------ERNLVTWNVMITGLVKWGELEF 158
++FDEMP ER+ ++WN ++ G ++ GE
Sbjct: 173 RVFDEMPSTNVVLGNTMVACYVRAGDVEAGRDVFDRMAERDPISWNTLMMGYLRQGEAGV 232
Query: 159 ARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIW 218
AR LFEEMP RNV SW +I ++ +A+ +F +M + +P T+ ++ A
Sbjct: 233 ARDLFEEMPDRNVNSWNMVIAACSQEGLWADAVEVFNRMRLARF-QPDPATMAVLMSACA 291
Query: 219 QNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVS 278
Q G + +HG ++G + VLN LID YAKCG + A LF + K+ VS
Sbjct: 292 QLGSLSIASQVHGI-LRKGCVEMNFHVLNSLIDMYAKCGSVSQAHLLF--VETRLKDTVS 348
Query: 279 WTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMV 338
+ +I A HG G++A++ F M + GL+P+ VTFL VL+AC+H GLV +G +F+ M
Sbjct: 349 YNVMICALAQHGHGRDALQIFDEMSEEGLQPDAVTFLGVLSACAHAGLVHDGKFYFESMR 408
Query: 339 EECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEM 398
+ HY C++D+ GRAG +E+A + A +P + VW L+ AC H NVE+
Sbjct: 409 TNYAIEQSPDHYACMVDLYGRAGLIEEAYQLARAMPVK-PHAGVWGALINACRKHCNVEV 467
Query: 399 GERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCS 452
G+ R+++ +E G G YVL+ N LA ++ E + + M + K GCS
Sbjct: 468 GKVAARELIAIEPGNPGTYVLLANTLARGQQWDFVETVWQSMRGKGIEKTAGCS 521
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 84/189 (44%), Gaps = 18/189 (9%)
Query: 262 ASKLFED-ISVERKNLVSWTSIISGFAMHG-----MGKEAVENFGRMQKVGL-KPNRVTF 314
A +F+ + +N+ WT+ I+ +A H + A+ F M + G+ +PN T
Sbjct: 61 ARAVFDSAVPAASENVYLWTATIAAYARHASSSLSAAEGALALFRLMLRRGVPRPNAFTA 120
Query: 315 LSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYG-CLIDMLGRAGRLEQAEKTALGI 373
SV+ CS V EG+ + L H G L+DM G GR+ A + +
Sbjct: 121 SSVVRCCSALRAVREGIQVHGFLFSAG--LGRASHVGAALVDMYGSLGRVADARRVFDEM 178
Query: 374 PSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDA 433
PS T+VV+ T++ G+VE G V ++ E D + ++ G R G+A
Sbjct: 179 PS--TNVVLGNTMVACYVRAGDVEAGRDVFDRMAER------DPISWNTLMMGYLRQGEA 230
Query: 434 ERLRRVMDE 442
R + +E
Sbjct: 231 GVARDLFEE 239
>gi|125539857|gb|EAY86252.1| hypothetical protein OsI_07623 [Oryza sativa Indica Group]
Length = 629
Score = 240 bits (613), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 130/356 (36%), Positives = 211/356 (59%), Gaps = 8/356 (2%)
Query: 102 KVGFQSHVYVNTALVNMYVSLGFLKDSSK-LFDEMPERNLVTWNVMITGLVKWGELEFAR 160
K G +H V +L+ +Y SLG + + + L+ ++V+WN M++G K G+L AR
Sbjct: 106 KCGALAHPVVTNSLLKLYCSLGLIDRARRVLYSGGAALDVVSWNTMVSGYGKGGDLGAAR 165
Query: 161 SLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQN 220
+F MP RN+VSW+ ++D R EAL +F +M+ E+ P + +++VL A
Sbjct: 166 EVFARMPERNLVSWSAMVDACVRAGEFGEALWVFDRMMREEF-RPDVVVLVSVLKACAHL 224
Query: 221 GDVKSCQLIHGYGEKRGFTAF--DIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVS 278
G V+ + +H Y E F ++ + L+D Y KCGC+ A ++F+ V R+++V
Sbjct: 225 GAVERGRWVHRYLETGSFGGRRGNLMLETALVDMYCKCGCMEDAWQVFD--GVHRRDVVL 282
Query: 279 WTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMV 338
W ++I G AM+G G+ A+E F RM + G PN TF++VL AC+H G V+EG F M
Sbjct: 283 WNAMIGGLAMNGYGERALELFRRMLQKGFMPNESTFIAVLCACTHTGRVDEGKRVFKSM- 341
Query: 339 EECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEM 398
++ + P +HYGCL D+LGRAG +E+AE L +P E W L+ +C H ++ +
Sbjct: 342 QDYGIKPQREHYGCLADLLGRAGNVEEAEALLLDMPME-PHASQWGALMSSCQMHNDINV 400
Query: 399 GERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
GERV ++++E+E GG YV+++N+ A GR+ +A +R++M++R A K G S +
Sbjct: 401 GERVGKRLIELEPYDGGRYVVLFNLYAVNGRWEEARTIRQMMEDRGAKKETGLSFI 456
>gi|297828245|ref|XP_002882005.1| hypothetical protein ARALYDRAFT_903974 [Arabidopsis lyrata subsp.
lyrata]
gi|297327844|gb|EFH58264.1| hypothetical protein ARALYDRAFT_903974 [Arabidopsis lyrata subsp.
lyrata]
Length = 408
Score = 240 bits (613), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 131/344 (38%), Positives = 206/344 (59%), Gaps = 8/344 (2%)
Query: 113 TALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVV 172
++++ YV G ++D+ LFD MP R++VT MI G K G + A++LF++MP R+VV
Sbjct: 51 NSMIDGYVKHGRIEDAKGLFDVMPRRDVVTCATMIDGYAKLGFVHQAKTLFDQMPLRDVV 110
Query: 173 SWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGY 232
++ ++ GY + EAL +F M + P E T++ +L AI Q G + +H Y
Sbjct: 111 AYNSMMAGYVQNKCHMEALEIFNDMEKESHLSPDETTLVIILSAIAQLGRLSKATDMHLY 170
Query: 233 -GEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGM 291
EK+ + + V LID Y+KCG I A +FE I E K++ W ++I G A+HG+
Sbjct: 171 IVEKQFYLGGKLGV--ALIDMYSKCGSIQHAMLVFEGI--ENKSIDHWNAMIGGLAVHGL 226
Query: 292 GKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYG 351
G+ A +++++ + P+ +TF+ VLNACSH GLV+EGL F+ M + ++ P ++HYG
Sbjct: 227 GESAFNMLLQIERLSIIPDDITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYG 286
Query: 352 CLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMER 411
C++D+L R+G +E A+ +P E D V+WRT L ACS H E GE V + ++ ++
Sbjct: 287 CMVDILSRSGSIELAKNLIEEMPIEPND-VIWRTFLTACSHHKEFETGELVAKHLI-LQA 344
Query: 412 GYG-GDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
GY YVL+ N+ A G + D R+R +M ER K+PGCS +
Sbjct: 345 GYNPSSYVLLSNMYASFGMWKDVRRVRTMMKERKIEKIPGCSWI 388
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 51/256 (19%), Positives = 104/256 (40%), Gaps = 40/256 (15%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+N+++ Y + +A ++ +++ S L P D T ++ A L +
Sbjct: 112 YNSMMAGYVQNKCHMEALEIFNDMEK-----ESHLSP--DETTLVIILSAIAQLGRLSKA 164
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
T +H I + F + AL++MY G ++ + +F+ + +++ WN MI GL
Sbjct: 165 TDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAVH 224
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
G E A ++ ++ +++ P +IT + V
Sbjct: 225 GLGESAFNMLLQIERLSII--------------------------------PDDITFVGV 252
Query: 214 LPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVER 273
L A +G VK L ++ ++ C++D ++ G I A L E++ +E
Sbjct: 253 LNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDILSRSGSIELAKNLIEEMPIE- 311
Query: 274 KNLVSWTSIISGFAMH 289
N V W + ++ + H
Sbjct: 312 PNDVIWRTFLTACSHH 327
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 87/201 (43%), Gaps = 38/201 (18%)
Query: 242 DIRVLNCLIDTYAKCGCIFSASKLFEDISVER---------------------------- 273
D+ N +ID Y K G I A LF D+ R
Sbjct: 46 DLISWNSMIDGYVKHGRIEDAKGLF-DVMPRRDVVTCATMIDGYAKLGFVHQAKTLFDQM 104
Query: 274 --KNLVSWTSIISGFAMHGMGKEAVENFGRMQKVG-LKPNRVTFLSVLNACSHGGLVEEG 330
+++V++ S+++G+ + EA+E F M+K L P+ T + +L+A + G + +
Sbjct: 105 PLRDVVAYNSMMAGYVQNKCHMEALEIFNDMEKESHLSPDETTLVIILSAIAQLGRLSKA 164
Query: 331 LNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGAC 390
+ +VE+ L K LIDM + G ++ A GI ++ D W ++G
Sbjct: 165 TDMHLYIVEKQFYLGG-KLGVALIDMYSKCGSIQHAMLVFEGIENKSID--HWNAMIGGL 221
Query: 391 SFHGNVEMGERVTRKILEMER 411
+ HG +GE +L++ER
Sbjct: 222 AVHG---LGESAFNMLLQIER 239
Score = 42.4 bits (98), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 45/86 (52%), Gaps = 11/86 (12%)
Query: 255 KCGCIFS-ASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNR-- 311
KC C S ASKLF ++ K+L+SW S+I G+ HG ++A F M P R
Sbjct: 27 KCRCNCSIASKLFAEMP--EKDLISWNSMIDGYVKHGRIEDAKGLFDVM------PRRDV 78
Query: 312 VTFLSVLNACSHGGLVEEGLNFFDKM 337
VT ++++ + G V + FD+M
Sbjct: 79 VTCATMIDGYAKLGFVHQAKTLFDQM 104
>gi|224077718|ref|XP_002305377.1| predicted protein [Populus trichocarpa]
gi|222848341|gb|EEE85888.1| predicted protein [Populus trichocarpa]
Length = 427
Score = 240 bits (613), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 123/340 (36%), Positives = 204/340 (60%), Gaps = 5/340 (1%)
Query: 115 LVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSW 174
+++ YV G + + LF+ MPERN+V+W+ M++G K G++E AR LF+ MP +N+VSW
Sbjct: 49 ILDGYVKAGEMNKAFGLFESMPERNVVSWSTMVSGYCKAGDMEMARMLFDRMPVKNLVSW 108
Query: 175 TGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGE 234
T I+ GY + +A+ F +M +P + T++++L + ++G + + +H E
Sbjct: 109 TIIVSGYAVKGLAKDAIRSFEQMEEAGL-KPDDGTVISILASCAESGLLGLGKRVHTSIE 167
Query: 235 KRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKE 294
+ + + V N L+D YAKCG + A +F +S +K+LVSW ++ G AMHG G++
Sbjct: 168 RIRYKC-SVNVSNALVDMYAKCGQVDRALSVFNGMS--KKDLVSWNCMLQGLAMHGHGEK 224
Query: 295 AVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLI 354
A++ F M++ G +P++VT ++VL AC H G V+EG+ +F+ M + ++P I+HYGC++
Sbjct: 225 ALQLFSIMRQEGFRPDKVTLVAVLCACVHAGFVDEGIRYFNNMERDYGIVPHIEHYGCMV 284
Query: 355 DMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYG 414
D+LGR GRL++A + +P E +VV+W TLLGAC H V + E V + ++E
Sbjct: 285 DLLGRGGRLKEAYRLVQSMPVE-PNVVIWGTLLGACRMHNAVGLAEEVLDCLFKLEPSDP 343
Query: 415 GDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
G+Y L+ NI A G + +R M K G S +
Sbjct: 344 GNYSLLSNIFASAGDWSSVANVRLQMKNFGIQKPSGASSI 383
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 89/296 (30%), Positives = 145/296 (48%), Gaps = 50/296 (16%)
Query: 130 KLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNE 189
+LF M ER++V+WN MI GL+K GEL A LF+EMP ++ VSW I+DGY + N+
Sbjct: 2 RLFKVMDERDVVSWNSMIRGLLKVGELSEACKLFDEMPMKDAVSWNTILDGYVKAGEMNK 61
Query: 190 ALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCL 249
A LF M +R ++ + +
Sbjct: 62 AFGLFESM------------------------------------PERNVVSW-----STM 80
Query: 250 IDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKP 309
+ Y K G + A LF+ + V KNLVSWT I+SG+A+ G+ K+A+ +F +M++ GLKP
Sbjct: 81 VSGYCKAGDMEMARMLFDRMPV--KNLVSWTIIVSGYAVKGLAKDAIRSFEQMEEAGLKP 138
Query: 310 NRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKT 369
+ T +S+L +C+ GL+ G +E + L+DM + G++++A
Sbjct: 139 DDGTVISILASCAESGLLGLGKRVHTS-IERIRYKCSVNVSNALVDMYAKCGQVDRALSV 197
Query: 370 ALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEM-ERGYGGDYVLMYNIL 424
G+ + D+V W +L + HG+ GE+ + M + G+ D V + +L
Sbjct: 198 FNGMSKK--DLVSWNCMLQGLAMHGH---GEKALQLFSIMRQEGFRPDKVTLVAVL 248
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 64/286 (22%), Positives = 123/286 (43%), Gaps = 46/286 (16%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+ ++ Y++ + A ++Q+++ + L P D T ++ +CA LG
Sbjct: 108 WTIIVSGYAVKGLAKDAIRSFEQMEE------AGLKP--DDGTVISILASCAESGLLGLG 159
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
++H I ++ ++ V V+ ALV+MY G + + +F+ M +++LV+WN M+ GL
Sbjct: 160 KRVHTSIERIRYKCSVNVSNALVDMYAKCGQVDRALSVFNGMSKKDLVSWNCMLQGLAMH 219
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
G E A LF ++ R+ E P ++T++AV
Sbjct: 220 GHGEKALQLF----------------------------SIMRQ----EGFRPDKVTLVAV 247
Query: 214 LPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVER 273
L A G V E+ I C++D + G + A +L + + VE
Sbjct: 248 LCACVHAGFVDEGIRYFNNMERDYGIVPHIEHYGCMVDLLGRGGRLKEAYRLVQSMPVE- 306
Query: 274 KNLVSWTSIISGFAMH---GMGKEAVENFGRMQKVGLKPNRVTFLS 316
N+V W +++ MH G+ +E ++ +++ P + LS
Sbjct: 307 PNVVIWGTLLGACRMHNAVGLAEEVLDCLFKLEPS--DPGNYSLLS 350
>gi|297723179|ref|NP_001173953.1| Os04g0436350 [Oryza sativa Japonica Group]
gi|21740490|emb|CAD40814.1| OSJNBa0006B20.5 [Oryza sativa Japonica Group]
gi|125590470|gb|EAZ30820.1| hypothetical protein OsJ_14890 [Oryza sativa Japonica Group]
gi|218194889|gb|EEC77316.1| hypothetical protein OsI_15981 [Oryza sativa Indica Group]
gi|255675491|dbj|BAH92681.1| Os04g0436350 [Oryza sativa Japonica Group]
Length = 685
Score = 240 bits (613), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 155/479 (32%), Positives = 248/479 (51%), Gaps = 38/479 (7%)
Query: 7 SQTPNNITTQIHSHLLTTNSLLHHSQLF--NTLLHFYSLAESPQKAFLLYKQLQQIYTHS 64
S+ + Q+H+ L+T +S H S ++ L+ Y+ E P++A ++ + + S
Sbjct: 159 SEKASRTGEQVHA-LVTKSS--HGSDVYIGTALVDMYAKCERPEEAQKVFDAMPERNIVS 215
Query: 65 HSPLPPLF-----------------------DSFTYSFLIRTCATLSHPNLGTQLHAVIS 101
+ L + D T + ++ CA L+ G Q+H +
Sbjct: 216 WNSLITCYEQNGPVDEALALFVRMMKDGFVPDEVTLASVMSACAGLAAGREGRQVHTRMV 275
Query: 102 KVG-FQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFAR 160
K F+ + +N ALV+MY G ++ +FD M R++V+ MITG K + A+
Sbjct: 276 KSDRFREDMVLNNALVDMYAKCGRTWEAKCVFDRMAIRSVVSETSMITGYAKSANVGDAQ 335
Query: 161 SLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQN 220
++F +M +NVV+W +I Y + EAL LF ++ E P+ T VL A
Sbjct: 336 AVFLQMVEKNVVAWNVLIATYAHNSEEEEALRLFVRLKR-ESVWPTHYTYGNVLNACANL 394
Query: 221 GDVKSCQLIHGYGEKRGF-----TAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKN 275
+++ Q H + K GF D+ V N L+D Y K G I +K+FE ++ ++
Sbjct: 395 ANLQLGQQAHVHVLKEGFRFDSGPESDVFVGNSLVDMYLKTGSISDGAKVFERMAA--RD 452
Query: 276 LVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFD 335
VSW ++I G+A +G K+A+ F RM +P+ VT + VL+AC H GLV+EG +F
Sbjct: 453 NVSWNAMIVGYAQNGRAKDALLLFERMLCSNERPDSVTMIGVLSACGHSGLVKEGRRYFQ 512
Query: 336 KMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGN 395
M E+ ++P HY C+ID+LGRAG L++ E+ +P E D V+W +LLGAC H N
Sbjct: 513 SMTEDHGIIPTRDHYTCMIDLLGRAGHLKEVEELIENMPME-PDAVLWASLLGACRLHKN 571
Query: 396 VEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
++MGE K+ E++ G YVL+ N+ A +G++ D R+RR M R K PGCS +
Sbjct: 572 IDMGEWAAGKLFELDPDNSGPYVLLSNMYAELGKWADVFRVRRSMKHRGVSKQPGCSWI 630
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 128/263 (48%), Gaps = 4/263 (1%)
Query: 105 FQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFE 164
F ++ L++ Y LG L D+ ++FD MP RN ++N +++ + G + A +LF
Sbjct: 46 FAGETFLLNTLLSAYARLGSLHDARRVFDGMPHRNTFSYNALLSACARLGRADDALALFG 105
Query: 165 EMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVK 224
+P + S+ ++ + R +AL M A ++ + + + L A +
Sbjct: 106 AIPDPDQCSYNAVVAALAQHGRGGDALRFLAAMHADDFV-LNAYSFASALSACASEKASR 164
Query: 225 SCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIIS 284
+ + +H K + D+ + L+D YAKC A K+F+ ++ +N+VSW S+I+
Sbjct: 165 TGEQVHALVTKSSHGS-DVYIGTALVDMYAKCERPEEAQKVFD--AMPERNIVSWNSLIT 221
Query: 285 GFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVL 344
+ +G EA+ F RM K G P+ VT SV++AC+ EG +MV+
Sbjct: 222 CYEQNGPVDEALALFVRMMKDGFVPDEVTLASVMSACAGLAAGREGRQVHTRMVKSDRFR 281
Query: 345 PDIKHYGCLIDMLGRAGRLEQAE 367
D+ L+DM + GR +A+
Sbjct: 282 EDMVLNNALVDMYAKCGRTWEAK 304
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 101/409 (24%), Positives = 180/409 (44%), Gaps = 84/409 (20%)
Query: 71 LFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSK 130
+ ++++++ + CA+ G Q+HA+++K S VY+ TALV+MY +++ K
Sbjct: 144 VLNAYSFASALSACASEKASRTGEQVHALVTKSSHGSDVYIGTALVDMYAKCERPEEAQK 203
Query: 131 LFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEA 190
+FD MPERN+V+WN +IT +E+ G +D EA
Sbjct: 204 VFDAMPERNIVSWNSLIT-------------CYEQ---------NGPVD---------EA 232
Query: 191 LALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLI 250
LALF +M+ + P E+T+ +V+ A + + +H K D+ + N L+
Sbjct: 233 LALFVRMMKDGFV-PDEVTLASVMSACAGLAAGREGRQVHTRMVKSDRFREDMVLNNALV 291
Query: 251 DTYAKCGCIFSASKLFEDISVE-----------------------------RKNLVSWTS 281
D YAKCG + A +F+ +++ KN+V+W
Sbjct: 292 DMYAKCGRTWEAKCVFDRMAIRSVVSETSMITGYAKSANVGDAQAVFLQMVEKNVVAWNV 351
Query: 282 IISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNAC-----------SHGGLVEEG 330
+I+ +A + +EA+ F R+++ + P T+ +VLNAC +H +++EG
Sbjct: 352 LIATYAHNSEEEEALRLFVRLKRESVWPTHYTYGNVLNACANLANLQLGQQAHVHVLKEG 411
Query: 331 LNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGAC 390
FD E D+ L+DM + G + K + + D V W ++
Sbjct: 412 FR-FDSGPES-----DVFVGNSLVDMYLKTGSISDGAKVFERMAAR--DNVSWNAMIVGY 463
Query: 391 SFHGNVEMGERVTRKIL-EMERGYGGDYVLMYNILAGVGRFGDAERLRR 438
+ +G + + ++L ER D V M +L+ G G + RR
Sbjct: 464 AQNGRAKDALLLFERMLCSNER---PDSVTMIGVLSACGHSGLVKEGRR 509
>gi|356533814|ref|XP_003535453.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Glycine max]
Length = 782
Score = 240 bits (613), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 128/387 (33%), Positives = 218/387 (56%), Gaps = 9/387 (2%)
Query: 72 FDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSH----VYVNTALVNMYVSLGFLKD 127
D +TY+ +I + N+G Q+HA + + Q + VN AL+ +Y G L +
Sbjct: 272 LDEYTYTSVISAASNAGLFNIGRQVHAYVLRTVVQPSGHFVLSVNNALITLYTRCGKLVE 331
Query: 128 SSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRS 187
+ ++FD+MP ++LV+WN +++G V +E A S+F EMP R++++WT +I G +
Sbjct: 332 ARRVFDKMPVKDLVSWNAILSGCVNARRIEEANSIFREMPVRSLLTWTVMISGLAQNGFG 391
Query: 188 NEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLN 247
E L LF +M E EP + + + G + + Q +H + G + + V N
Sbjct: 392 EEGLKLFNQM-KLEGLEPCDYAYAGAIASCSVLGSLDNGQQLHSQIIQLGHDS-SLSVGN 449
Query: 248 CLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGL 307
LI Y++CG + +A +F +++ + VSW ++I+ A HG G +A++ + +M K +
Sbjct: 450 ALITMYSRCGLVEAADTVF--LTMPYVDSVSWNAMIAALAQHGHGVQAIQLYEKMLKEDI 507
Query: 308 KPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAE 367
P+R+TFL++L+ACSH GLV+EG ++FD M + P+ HY LID+L RAG +A+
Sbjct: 508 LPDRITFLTILSACSHAGLVKEGRHYFDTMRVCYGITPEEDHYSRLIDLLCRAGMFSEAK 567
Query: 368 KTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGV 427
+P E +W LL C HGN+E+G + ++LE+ G Y+ + N+ A +
Sbjct: 568 NVTESMPFE-PGAPIWEALLAGCWIHGNMELGIQAADRLLELMPQQDGTYISLSNMYAAL 626
Query: 428 GRFGDAERLRRVMDERNAFKVPGCSLV 454
G++ + R+R++M ER K PGCS +
Sbjct: 627 GQWDEVARVRKLMRERGVKKEPGCSWI 653
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 91/373 (24%), Positives = 159/373 (42%), Gaps = 54/373 (14%)
Query: 82 RTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLV 141
R A LSH + +HA I GF+ + L++ Y + + LFD++P+ ++V
Sbjct: 4 RYLAQLSHTSFARAVHAHILTSGFKPFPLIINRLIDHYCKSFNIPYARYLFDKIPKPDIV 63
Query: 142 TWNVMITGLVKWGELEFARSLFEEMP--CRNVVSWTGIIDGYTRMNRSNEALALFRKMVA 199
M++ G ++ A LF P R+ VS+ +I ++ + + AL LF +M
Sbjct: 64 AATTMLSAYSAAGNIKLAHQLFNATPMSIRDTVSYNAMITAFSHSHDGHAALQLFVQMKR 123
Query: 200 CEYTEPSEITILAVLPAIWQNGDVKS-CQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCG- 257
+ P T +VL A+ D ++ CQ +H K G + VLN L+ Y C
Sbjct: 124 LGFV-PDPFTFSSVLGALSLIADEETHCQQLHCEVFKWGALSVP-SVLNALMSCYVSCAS 181
Query: 258 ------CIF--SASKLFEDISVERKNLVSWTSI--------------------------- 282
C+ +A KLF++ R++ +WT+I
Sbjct: 182 SPLVNSCVLMAAARKLFDEAPPGRRDEPAWTTIIAGYVRNDDLVAARELLEGMTDHIAVA 241
Query: 283 ----ISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMV 338
ISG+ G +EA + RM +G++ + T+ SV++A S+ GL G ++
Sbjct: 242 WNAMISGYVHRGFYEEAFDLLRRMHSLGIQLDEYTYTSVISAASNAGLFNIGRQVHAYVL 301
Query: 339 EECEVLPDIKHY-----GCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFH 393
V+ H+ LI + R G+L +A + +P + D+V W +L C
Sbjct: 302 R--TVVQPSGHFVLSVNNALITLYTRCGKLVEARRVFDKMP--VKDLVSWNAILSGCVNA 357
Query: 394 GNVEMGERVTRKI 406
+E + R++
Sbjct: 358 RRIEEANSIFREM 370
>gi|297800728|ref|XP_002868248.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314084|gb|EFH44507.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 725
Score = 240 bits (613), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 134/421 (31%), Positives = 228/421 (54%), Gaps = 13/421 (3%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+NT++ Y +AF L+++++ S + P D ++ C +
Sbjct: 183 WNTMIERYCRFGLLDEAFKLFEEMKD------SNVMP--DEMILCNIVSACGRTGNMRYN 234
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
++ + + + ++ TALV MY G + + + F +M RNL M++G K
Sbjct: 235 RAIYDFLIENDVRMDTHLLTALVTMYAGAGCMDMAMEFFRKMSVRNLFVSTAMVSGYSKA 294
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
G L+ AR +F++ +++V WT +I Y + EAL +F +M C +P +T+L+V
Sbjct: 295 GRLDDARVIFDQTEMKDLVCWTTMISAYAESDHPQEALRVFEEM-CCSGIKPDVVTMLSV 353
Query: 214 LPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVER 273
+ A G + + +H Y G + + + N LI+ YAKCG + +A +FE +
Sbjct: 354 ISACVNLGTLDKAKWVHRYTHLNGLESV-LPIDNALINMYAKCGGLDAARDVFEKMPT-- 410
Query: 274 KNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNF 333
+N+VSW+S+I+ FAMHG +++ F +M++ ++PN VTF+ VL CSH GLVEEG
Sbjct: 411 RNVVSWSSMINAFAMHGEASDSLSLFAQMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKI 470
Query: 334 FDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFH 393
F M +E + P I+HYGC++D+ GRA L +A + +P +VV+W +L+ AC H
Sbjct: 471 FASMTDEYNITPKIEHYGCMVDLFGRANLLREALEVIESMPMA-PNVVIWGSLMSACRVH 529
Query: 394 GNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSL 453
G +E+GE ++IL++E + G VLM NI A R+ +R +M+++ FK G S
Sbjct: 530 GELELGELAAKRILKLEPDHDGALVLMSNIYAREYRWDYVRIIRWIMEKKKVFKEKGLSR 589
Query: 454 V 454
+
Sbjct: 590 I 590
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 103/406 (25%), Positives = 183/406 (45%), Gaps = 77/406 (18%)
Query: 20 HLLTTNSLLHHSQLFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSF 79
+L ++ S L S +FN+LL S + P+ L Y++++ + FD ++
Sbjct: 68 NLFSSISPLPESIVFNSLLRDLSRSGEPRATILFYQRIRHVGGR--------FDRISFPP 119
Query: 80 LIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERN 139
+++ + +S G +LH K+ S +V T L++MY + G + + +FDEM +R+
Sbjct: 120 ILKAVSKVSALFEGMELHGFAFKIATLSDPFVETGLMDMYAACGRINYARNVFDEMSQRD 179
Query: 140 LVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVA 199
+VTWN MI ++G L+ A LFEEM NV+
Sbjct: 180 VVTWNTMIERYCRFGLLDEAFKLFEEMKDSNVM--------------------------- 212
Query: 200 CEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCI 259
P E+ + ++ A + G+++ + I+ + + D +L L+ YA GC+
Sbjct: 213 -----PDEMILCNIVSACGRTGNMRYNRAIYDFLIEND-VRMDTHLLTALVTMYAGAGCM 266
Query: 260 FSASKLFEDISV-----------------------------ERKNLVSWTSIISGFAMHG 290
A + F +SV E K+LV WT++IS +A
Sbjct: 267 DMAMEFFRKMSVRNLFVSTAMVSGYSKAGRLDDARVIFDQTEMKDLVCWTTMISAYAESD 326
Query: 291 MGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEG--LNFFDKMVEECEVLPDIK 348
+EA+ F M G+KP+ VT LSV++AC + G +++ ++ + + VLP
Sbjct: 327 HPQEALRVFEEMCCSGIKPDVVTMLSVISACVNLGTLDKAKWVHRYTHLNGLESVLP--- 383
Query: 349 HYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHG 394
LI+M + G L+ A +P+ +VV W +++ A + HG
Sbjct: 384 IDNALINMYAKCGGLDAARDVFEKMPTR--NVVSWSSMINAFAMHG 427
>gi|225434871|ref|XP_002280683.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g59600-like [Vitis vinifera]
Length = 545
Score = 240 bits (613), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 139/421 (33%), Positives = 222/421 (52%), Gaps = 44/421 (10%)
Query: 73 DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLF 132
+ F +++ C LS G +H VI K F+S Y+ +AL+ MY G ++ + ++F
Sbjct: 127 NQFVLPSILKACGHLSDRRTGENMHTVILKNSFESDAYIISALIYMYSKCGHVEKACRVF 186
Query: 133 DEMPER-----------------------------------NLVTWNVMITGLVKWGELE 157
D + ++ N+V+WN +I G + G+
Sbjct: 187 DWIVDKDLVVMNAMVSGYAQHGFVHEALNLVQKMQQAGVKPNVVSWNTLIAGFSQVGDKS 246
Query: 158 FARSLFEEMPCR----NVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
+F M +VVSWT +I G+ + ++E F++M+ + PS +TI ++
Sbjct: 247 MVSEVFRLMTANGVEPDVVSWTSVISGFVQNFHNHEGFDAFKEMLDQGFC-PSSVTISSL 305
Query: 214 LPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVER 273
LPA +++ + IHGY G D+ V + L+D YAKCG I A LF +
Sbjct: 306 LPACTNVANLRHGKEIHGYAMVIGVEK-DVYVRSALVDMYAKCGYISEAKILF--YMMPE 362
Query: 274 KNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNF 333
+N V+W S+I G+A HG EA+E F +M++ K + +TF +VLNACSH G+VE G +
Sbjct: 363 RNTVTWNSLIFGYANHGYCNEAIELFNQMEESDTKLDHLTFTAVLNACSHAGMVELGESL 422
Query: 334 FDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFH 393
F KM E+ + P ++HY C++D+LGRAG+L +A +P E D VW LLGAC H
Sbjct: 423 FRKMQEKYRIEPRLEHYACMVDLLGRAGKLSEAYDLIKAMPVE-PDKFVWGALLGACRNH 481
Query: 394 GNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSL 453
GN+E+ E + E+E G +L+ N+ A GR+G+A +++++M +R K PGCS
Sbjct: 482 GNIELAEVAAEHLFELEPESPGSSLLLSNLYADAGRWGNAAKMKKMMKQRKFGKFPGCSW 541
Query: 454 V 454
+
Sbjct: 542 I 542
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 99/429 (23%), Positives = 171/429 (39%), Gaps = 93/429 (21%)
Query: 93 GTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVK 152
G LHA + +G Y L++ Y G L ++ KLFD++P N+ W V+ +
Sbjct: 46 GRALHAHLVIIGLARLTYFAAKLMSFYTECGQLSNARKLFDKIPNTNIRRWIVLTGACAR 105
Query: 153 WGELEFARSLFEEM------PCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPS 206
G E A S F EM P + V+ G+ R+ E + V + + S
Sbjct: 106 RGFYEEALSAFSEMQKEGLRPNQFVLPSILKACGHLSDRRTGENM----HTVILKNSFES 161
Query: 207 EITILAVLPAIWQN-GDV-KSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASK 264
+ I++ L ++ G V K+C++ +K D+ V+N ++ YA+ G + A
Sbjct: 162 DAYIISALIYMYSKCGHVEKACRVFDWIVDK------DLVVMNAMVSGYAQHGFVHEALN 215
Query: 265 LFEDISVE--RKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACS 322
L + + + N+VSW ++I+GF+ G E F M G++P+ V++ SV++
Sbjct: 216 LVQKMQQAGVKPNVVSWNTLIAGFSQVGDKSMVSEVFRLMTANGVEPDVVSWTSVISGFV 275
Query: 323 HGGLVEEGLNFFDKMVEE---------------CEVLPDIKH------------------ 349
EG + F +M+++ C + +++H
Sbjct: 276 QNFHNHEGFDAFKEMLDQGFCPSSVTISSLLPACTNVANLRHGKEIHGYAMVIGVEKDVY 335
Query: 350 -YGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTL---------------------- 386
L+DM + G + +A+ +P T V W +L
Sbjct: 336 VRSALVDMYAKCGYISEAKILFYMMPERNT--VTWNSLIFGYANHGYCNEAIELFNQMEE 393
Query: 387 -------------LGACSFHGNVEMGERVTRKILEMER--GYGGDYVLMYNILAGVGRFG 431
L ACS G VE+GE + RK+ E R Y M ++L G+
Sbjct: 394 SDTKLDHLTFTAVLNACSHAGMVELGESLFRKMQEKYRIEPRLEHYACMVDLLGRAGKLS 453
Query: 432 DAERLRRVM 440
+A L + M
Sbjct: 454 EAYDLIKAM 462
>gi|147860004|emb|CAN81045.1| hypothetical protein VITISV_006763 [Vitis vinifera]
Length = 1321
Score = 240 bits (613), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 139/421 (33%), Positives = 222/421 (52%), Gaps = 44/421 (10%)
Query: 73 DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLF 132
+ F +++ C LS G +H VI K F+S Y+ +AL+ MY G ++ + ++F
Sbjct: 903 NQFVLPSILKACGHLSDRRTGENMHTVILKNSFESDAYIISALIYMYSKCGHVEKACRVF 962
Query: 133 DEMPER-----------------------------------NLVTWNVMITGLVKWGELE 157
D + ++ N+V+WN +I G + G+
Sbjct: 963 DWIVDKDLVVMNAMVSGYAQHGFVHEALBLVQKMQQAGVKPNVVSWNTLIAGFSQVGDKS 1022
Query: 158 FARSLFEEMPCR----NVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
+F M +VVSWT +I G+ + ++E F++M+ + PS +TI ++
Sbjct: 1023 MVSEVFRLMTANGVEPDVVSWTSVISGFVQNFHNHEGFDAFKEMLDQGFC-PSSVTISSL 1081
Query: 214 LPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVER 273
LPA +++ + IHGY G D+ V + L+D YAKCG I A LF +
Sbjct: 1082 LPACTNVANLRHGKEIHGYAMVIGVEK-DVYVRSALVDMYAKCGYISEAKILF--YMMPE 1138
Query: 274 KNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNF 333
+N V+W S+I G+A HG EA+E F +M++ K + +TF +VLNACSH G+VE G +
Sbjct: 1139 RNTVTWNSLIFGYANHGYCNEAIELFNQMEESDTKLDHLTFTAVLNACSHAGMVELGESL 1198
Query: 334 FDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFH 393
F KM E+ + P ++HY C++D+LGRAG+L +A +P E D VW LLGAC H
Sbjct: 1199 FXKMQEKYRIEPRLEHYACMVDLLGRAGKLSEAYDLIKAMPVE-PDKFVWGALLGACRNH 1257
Query: 394 GNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSL 453
GN+E+ E + E+E G +L+ N+ A GR+G+A +++++M +R K PGCS
Sbjct: 1258 GNIELAEVAAEHLFELEPESPGSSLLLSNLYADAGRWGNAAKMKKMMKQRKFGKFPGCSW 1317
Query: 454 V 454
+
Sbjct: 1318 I 1318
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 140/469 (29%), Positives = 228/469 (48%), Gaps = 73/469 (15%)
Query: 16 QIHSHLLTTNSLLHHSQLFNTLLHFYSLAESPQKAFLLYKQLQQ------------IYTH 63
Q+H+H++ L + + N LL YS ++A ++++ L+Q Y H
Sbjct: 235 QLHAHVVKMQ-YLSETAVGNALLTLYSKCGMMEEAEIVFESLRQRNIISWTASINGFYQH 293
Query: 64 S-------------HSPLPPLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVY 110
S + P + FT+S ++ +C + G H + K G S V+
Sbjct: 294 GDFKKALKQFSMMRESGIEP--NEFTFSIVLASCGCVKDFIDGRMFHTQVIKKGMASGVF 351
Query: 111 VNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRN 170
V TA+++MY LG + ++ K F +M +
Sbjct: 352 VGTAIIDMYSGLGEMDEAEKQFKQMGR------------------------------AAS 381
Query: 171 VVSWTGIIDGYTRMNRSNEALALFRKMV----AC-EYTEPSEITILAVLPAIWQNGDVKS 225
VSW +I GY + +A+ F +MV AC E+T + + P++ + S
Sbjct: 382 NVSWNALIAGYVLNEKIEKAMEAFCRMVKEDVACNEFTYSNIFKACSSFPSLATTVQIHS 441
Query: 226 CQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISG 285
+LI E ++ V + LI+ Y +CG + +A ++F IS ++VSW SII
Sbjct: 442 -RLIKSNVES------NLHVASSLIEAYTQCGSLENAVQVFTQIS--DADVVSWNSIIKA 492
Query: 286 FAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLP 345
++ +G +A+ +M + G KP TFL+VL+ACSH GLV+EG FF MV++ + P
Sbjct: 493 YSQNGDPWKAIFLLRKMIEEGNKPTSXTFLTVLSACSHSGLVQEGQEFFKSMVQDYSIQP 552
Query: 346 DIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRK 405
+ H C++D+LGRAG+LE A + + T +WR LL AC ++ N++M E V K
Sbjct: 553 EETHCSCMVDILGRAGQLENALDFIKKLTMKPT-ASIWRPLLAACRYNSNLQMAEYVAEK 611
Query: 406 ILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
IL++E YV + N+ A VGR+ DAE RR+M+++ K PGCS +
Sbjct: 612 ILDLEPNDATVYVTLSNMYAEVGRWADAENQRRLMEQKEISKEPGCSWI 660
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/311 (26%), Positives = 145/311 (46%), Gaps = 47/311 (15%)
Query: 92 LGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLV 151
LG + H + K+G S +V T+L++MY G + + +++D+M + T N +I+
Sbjct: 131 LGRRWHCFVVKIGLGSDEFVCTSLIDMYAKCGEVDSAVRVYDKMTSLDAATCNCLISAYA 190
Query: 152 KWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITIL 211
+ G A +F + I + TR N YT + + +
Sbjct: 191 RNGFFVQAFQVFMQ-----------IGNMGTRPNH---------------YTYSTMLAVC 224
Query: 212 AVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISV 271
+ AI Q G + +H + K + + + V N L+ Y+KCG + A +FE S+
Sbjct: 225 GTISAI-QEG-----KQLHAHVVKMQYLS-ETAVGNALLTLYSKCGMMEEAEIVFE--SL 275
Query: 272 ERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGL 331
++N++SWT+ I+GF HG K+A++ F M++ G++PN TF VL +C G V++
Sbjct: 276 RQRNIISWTASINGFYQHGDFKKALKQFSMMRESGIEPNEFTFSIVLASC---GCVKD-- 330
Query: 332 NFFDKMVEECEVLPDIKHYG-----CLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTL 386
F D + +V+ G +IDM G +++AEK + ++ V W L
Sbjct: 331 -FIDGRMFHTQVIKKGMASGVFVGTAIIDMYSGLGEMDEAEKQFKQMGRAASN-VSWNAL 388
Query: 387 LGACSFHGNVE 397
+ + +E
Sbjct: 389 IAGYVLNEKIE 399
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 92/362 (25%), Positives = 156/362 (43%), Gaps = 53/362 (14%)
Query: 93 GTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVK 152
G LHA + +G Y L++ Y G L ++ KLFD++P N+ W V+ +
Sbjct: 822 GRALHAHLVIIGLARLTYFAAKLMSFYTECGQLSNARKLFDKIPNTNIRRWIVLTGACAR 881
Query: 153 WGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILA 212
G E A S F EM E L P++ + +
Sbjct: 882 RGFYEEALSAFSEM--------------------QKEGL------------RPNQFVLPS 909
Query: 213 VLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVE 272
+L A D ++ + +H K F + D +++ LI Y+KCG + A ++F+ I
Sbjct: 910 ILKACGHLSDRRTGENMHTVILKNSFES-DAYIISALIYMYSKCGHVEKACRVFDWIV-- 966
Query: 273 RKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLN 332
K+LV +++SG+A HG EA++ +MQ+ G+KPN V++ +++ S G
Sbjct: 967 DKDLVVMNAMVSGYAQHGFVHEALBLVQKMQQAGVKPNVVSWNTLIAGFSQVGDKSMVSE 1026
Query: 333 FFDKMVEECEVLPDIKHYGCLI-----DMLGRAGRLEQAEKTALGI-PSEITDVVVWRTL 386
F M V PD+ + +I + G E G PS +T +L
Sbjct: 1027 VFRLMTAN-GVEPDVVSWTSVISGFVQNFHNHEGFDAFKEMLDQGFCPSSVT----ISSL 1081
Query: 387 LGACSFHGNVEMGERV--TRKILEMERGYGGDYV--LMYNILAGVGRFGDAERLRRVMDE 442
L AC+ N+ G+ + ++ +E+ YV + ++ A G +A+ L +M E
Sbjct: 1082 LPACTNVANLRHGKEIHGYAMVIGVEKDV---YVRSALVDMYAKCGYISEAKILFYMMPE 1138
Query: 443 RN 444
RN
Sbjct: 1139 RN 1140
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 98/221 (44%), Gaps = 10/221 (4%)
Query: 153 WGELEFARSLFEEMPCRNVVSWT-GIIDGYTRMNRSNEALALFRKMVACEYTE-----PS 206
W +L A LFE+ P R VS T G T A F + E P
Sbjct: 53 WVDLNNACILFEKTPKRIGVSITESHRSGCTDDPEEGVKEAGFFTRNETPHVEFGGGFPH 112
Query: 207 EITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLF 266
+ + L + G V+ + H + K G + D V LID YAKCG + SA +++
Sbjct: 113 RQYVFSALSFCGREGCVELGRRWHCFVVKIGLGS-DEFVCTSLIDMYAKCGEVDSAVRVY 171
Query: 267 EDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGL 326
+ ++ + + +IS +A +G +A + F ++ +G +PN T+ ++L C
Sbjct: 172 DKMT--SLDAATCNCLISAYARNGFFVQAFQVFMQIGNMGTRPNHYTYSTMLAVCGTISA 229
Query: 327 VEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAE 367
++EG +V + + L + L+ + + G +E+AE
Sbjct: 230 IQEGKQLHAHVV-KMQYLSETAVGNALLTLYSKCGMMEEAE 269
>gi|347954542|gb|AEP33771.1| organelle transcript processing 82, partial [Thlaspi arvense]
Length = 673
Score = 240 bits (613), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 139/422 (32%), Positives = 231/422 (54%), Gaps = 44/422 (10%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+N ++ Y+ S ++A L+K++ + D T ++ CA LG
Sbjct: 166 WNAMISGYAETGSYKEALELFKEMMKTNVRP--------DEGTMVTVLSACAQSRSVELG 217
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
Q+H+ I GF S++ + AL+++Y K
Sbjct: 218 RQVHSWIDDHGFGSNLKIVNALIDLYS-------------------------------KC 246
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
G++E A LFE + C++VVSW +I GYT MN EAL LF++M+ + P+++TI+++
Sbjct: 247 GQVETACGLFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGES-PNDVTIVSI 305
Query: 214 LPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVL-NCLIDTYAKCGCIFSASKLFEDISVE 272
LPA G + + IH Y +K+ + L LID YAKCG I +A ++F S+
Sbjct: 306 LPACAHLGAIDIGRWIHVYIDKKLKDVTNAPSLRTSLIDMYAKCGDIEAAHQVFN--SML 363
Query: 273 RKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLN 332
K+L SW ++I GFAMHG + F RM+K G++P+ +TF+ +L+ACSH G ++ G +
Sbjct: 364 HKSLSSWNAMIFGFAMHGRANAGFDLFSRMRKNGIEPDDITFVGLLSACSHSGKLDLGRH 423
Query: 333 FFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSF 392
F M ++ ++ P ++HYGC+ID+LG +G ++A++ +P E D V+W +LL AC
Sbjct: 424 IFKSMTQDYDITPKLEHYGCMIDLLGHSGLFKEAKEMIKTMPME-PDGVIWCSLLKACRR 482
Query: 393 HGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCS 452
HGN+E+ E R ++++E G YVL+ NI A G + + ++R +++ + KVPGCS
Sbjct: 483 HGNLELAESFARNLMKVEPENPGSYVLLSNIYATAGEWDEVAKVRALLNGKGMKKVPGCS 542
Query: 453 LV 454
+
Sbjct: 543 SI 544
Score = 205 bits (522), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 119/370 (32%), Positives = 206/370 (55%), Gaps = 19/370 (5%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNL 92
++NT+L Y+L+ P A LY + S LP +S+T+ FL+++CA
Sbjct: 33 IWNTMLRGYALSSDPVSALKLY-----VVMISLGLLP---NSYTFPFLLKSCAKSKAFEE 84
Query: 93 GTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVK 152
G Q+H + K+G++ +YV+T+L++MY G L+D+ K+FD R++V++ +ITG
Sbjct: 85 GQQIHGHVLKLGYEPDLYVHTSLISMYAQNGRLEDAHKVFDRSSHRDVVSYTALITGYAS 144
Query: 153 WGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILA 212
G + A+ +F+E+P ++VVSW +I GY EAL LF++M+ P E T++
Sbjct: 145 SGNIRSAQEMFDEIPVKDVVSWNAMISGYAETGSYKEALELFKEMMKTN-VRPDEGTMVT 203
Query: 213 VLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVE 272
VL A Q+ V+ + +H + + GF + +++++N LID Y+KCG + +A LFE +S
Sbjct: 204 VLSACAQSRSVELGRQVHSWIDDHGFGS-NLKIVNALIDLYSKCGQVETACGLFEGLSC- 261
Query: 273 RKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGL- 331
K++VSW ++I G+ + KEA+ F M + G PN VT +S+L AC+H G ++ G
Sbjct: 262 -KDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTIVSILPACAHLGAIDIGRW 320
Query: 332 --NFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGA 389
+ DK +++ P ++ LIDM + G +E A + + + + W ++
Sbjct: 321 IHVYIDKKLKDVTNAPSLR--TSLIDMYAKCGDIEAAHQVFNSMLHK--SLSSWNAMIFG 376
Query: 390 CSFHGNVEMG 399
+ HG G
Sbjct: 377 FAMHGRANAG 386
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 121/262 (46%), Gaps = 36/262 (13%)
Query: 158 FARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAI 217
+A S+F + N + W ++ GY + AL L+ M++ P+ T +L +
Sbjct: 18 YAISVFATIQEPNQLIWNTMLRGYALSSDPVSALKLYVVMISLGLL-PNSYTFPFLLKSC 76
Query: 218 WQNGDVKSCQLIHGYGEKRGF------------------------------TAFDIRVLN 247
++ + Q IHG+ K G+ + D+
Sbjct: 77 AKSKAFEEGQQIHGHVLKLGYEPDLYVHTSLISMYAQNGRLEDAHKVFDRSSHRDVVSYT 136
Query: 248 CLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGL 307
LI YA G I SA ++F++I V K++VSW ++ISG+A G KEA+E F M K +
Sbjct: 137 ALITGYASSGNIRSAQEMFDEIPV--KDVVSWNAMISGYAETGSYKEALELFKEMMKTNV 194
Query: 308 KPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAE 367
+P+ T ++VL+AC+ VE G +++ ++K LID+ + G++E A
Sbjct: 195 RPDEGTMVTVLSACAQSRSVELGRQVH-SWIDDHGFGSNLKIVNALIDLYSKCGQVETAC 253
Query: 368 KTALGIPSEITDVVVWRTLLGA 389
G+ + DVV W TL+G
Sbjct: 254 GLFEGLSCK--DVVSWNTLIGG 273
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 66/137 (48%), Gaps = 3/137 (2%)
Query: 270 SVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEE 329
+++ N + W +++ G+A+ A++ + M +GL PN TF +L +C+ EE
Sbjct: 25 TIQEPNQLIWNTMLRGYALSSDPVSALKLYVVMISLGLLPNSYTFPFLLKSCAKSKAFEE 84
Query: 330 GLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGA 389
G ++ + PD+ + LI M + GRLE A K + S DVV + L+
Sbjct: 85 GQQIHGHVL-KLGYEPDLYVHTSLISMYAQNGRLEDAHK--VFDRSSHRDVVSYTALITG 141
Query: 390 CSFHGNVEMGERVTRKI 406
+ GN+ + + +I
Sbjct: 142 YASSGNIRSAQEMFDEI 158
>gi|255545098|ref|XP_002513610.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223547518|gb|EEF49013.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 660
Score = 240 bits (612), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 143/462 (30%), Positives = 242/462 (52%), Gaps = 57/462 (12%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNL 92
FN ++ Y + A L+YK + YT P D +TY +++ + +
Sbjct: 87 FFNVMIRSYVNNHLYKDALLVYKTM---YTQGFVP-----DMYTYPCVLKASSRSDSLWV 138
Query: 93 GTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVK 152
G Q+H + K+G ++YV L+ MY LK++ ++ DE+P R++V+WN M++ +
Sbjct: 139 GLQIHGAVLKIGLDLNLYVGNGLIAMYGKCKSLKEAQQVLDEIPCRDVVSWNSMVSVYAQ 198
Query: 153 WG----------ELE---------------------------FARSLFEEMPCRNVVSWT 175
G E+E + + +F ++ ++V+SW
Sbjct: 199 NGRFNDALELCREMEALNLKPNDCTMASLLPAVTNTTSDNVLYVKEMFLKLTKKSVISWN 258
Query: 176 GIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQL---IHGY 232
+I Y + EA+ L+ +M A EP ++I++VLPA GD+ + L +H +
Sbjct: 259 VMIAMYVNNSMPKEAVVLYSQMEA-NGVEPDVVSIVSVLPAY---GDLSALSLGRRVHKF 314
Query: 233 GEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMG 292
E++ ++ + N LID YAKCGC+ A +F + + +++VSWTSIIS + G G
Sbjct: 315 AERKKLLP-NLLLENALIDMYAKCGCLRDARAVFNQM--QFRDVVSWTSIISAYGKCGQG 371
Query: 293 KEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGC 352
++AV F M+ GL P+ + F+SVL ACSH GL+++G +F+ M EC + P ++H+ C
Sbjct: 372 RDAVAVFAEMRNSGLNPDSIAFVSVLAACSHAGLLDDGRYYFNLMA-ECGITPKLEHFAC 430
Query: 353 LIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERG 412
++D+LGRAG++++A +P E D VW LL AC + N+ +G K+L +
Sbjct: 431 VVDLLGRAGKIDEAYGFIRQMPLE-PDERVWGPLLSACRVYSNMNIGILAADKLLMLNPE 489
Query: 413 YGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
+ G YVL+ NI A GR+ D +R +M+ + K+PG S V
Sbjct: 490 HSGYYVLLSNIYAKAGRWADVAAIRSIMERKGIKKLPGISNV 531
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 89/173 (51%), Gaps = 10/173 (5%)
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTE---PSEITI 210
GE AR +F+E+ +NVV + +I Y + +AL +++ M YT+ P T
Sbjct: 68 GEPGLARHIFDEITDKNVVFFNVMIRSYVNNHLYKDALLVYKTM----YTQGFVPDMYTY 123
Query: 211 LAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDIS 270
VL A ++ + IHG K G ++ V N LI Y KC + A ++ ++I
Sbjct: 124 PCVLKASSRSDSLWVGLQIHGAVLKIGLD-LNLYVGNGLIAMYGKCKSLKEAQQVLDEIP 182
Query: 271 VERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSH 323
+++VSW S++S +A +G +A+E M+ + LKPN T S+L A ++
Sbjct: 183 C--RDVVSWNSMVSVYAQNGRFNDALELCREMEALNLKPNDCTMASLLPAVTN 233
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 87/190 (45%), Gaps = 9/190 (4%)
Query: 219 QNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVS 278
Q D+ + + +HG + ++ V L+ YA CG A +F++I+ KN+V
Sbjct: 30 QYPDINTLKKLHGKVLNDQYLRWNPSVGIKLMRVYAACGEPGLARHIFDEIT--DKNVVF 87
Query: 279 WTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMV 338
+ +I + + + K+A+ + M G P+ T+ VL A S + GL ++
Sbjct: 88 FNVMIRSYVNNHLYKDALLVYKTMYTQGFVPDMYTYPCVLKASSRSDSLWVGLQIHGAVL 147
Query: 339 EECEVLPDIKHY--GCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNV 396
++ D+ Y LI M G+ L++A++ IP DVV W +++ + +G
Sbjct: 148 ---KIGLDLNLYVGNGLIAMYGKCKSLKEAQQVLDEIPCR--DVVSWNSMVSVYAQNGRF 202
Query: 397 EMGERVTRKI 406
+ R++
Sbjct: 203 NDALELCREM 212
>gi|296084034|emb|CBI24422.3| unnamed protein product [Vitis vinifera]
Length = 502
Score = 240 bits (612), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 145/383 (37%), Positives = 217/383 (56%), Gaps = 24/383 (6%)
Query: 75 FTYSFLIRTCATLSHPNL--GTQLHAVISKVGFQS-HVYVNTALVNMYVSLGFLKDSSKL 131
T+ L+ C L G +HA + K+G + +V V TALV+MY G L + +
Sbjct: 90 ITFLTLLSACTDFPLEGLRFGGSIHAYVRKLGLDTENVMVGTALVDMYSKCGQLDLAWLM 149
Query: 132 FDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEAL 191
FDEM RN V+WN MI G ++ GE+ A LF++M R+ +SWT +I G+ + +AL
Sbjct: 150 FDEMHVRNSVSWNTMIDGCMRNGEVGEAIVLFDQMSERDAISWTSMIGGFVKKGCFEQAL 209
Query: 192 ALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLID 251
FR+M EP +TI++VL A G + I+ + K+ F +I++ N LID
Sbjct: 210 EWFREM-QLAGVEPDYVTIISVLAACANLGALGLGLWINRFVMKQDFKD-NIKISNSLID 267
Query: 252 TYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNR 311
Y++CGCI A ++FE + +++LVSW S+I GFA++G +EA+E F M+K G
Sbjct: 268 MYSRCGCIRLARQVFEQMP--KRSLVSWNSMIVGFALNGHAEEALEFFNLMRKEG----- 320
Query: 312 VTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTAL 371
H GLV+EGL FFD M ++ P I+HYGCL+D+ RAGRLE A
Sbjct: 321 -----------HSGLVDEGLQFFDIMKRTRKISPRIEHYGCLVDLYSRAGRLEDALNVIA 369
Query: 372 GIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFG 431
+P + +VV+ +LL AC HG+V + ER+ + + E++ G +YVL+ NI A VGR+
Sbjct: 370 NMPMKPNEVVL-GSLLAACRTHGDVGLAERLMKYLCEVDPGSDSNYVLLSNIYAAVGRWD 428
Query: 432 DAERLRRVMDERNAFKVPGCSLV 454
A ++R+ M K PG S +
Sbjct: 429 GASKVRKKMKALGIHKKPGFSSI 451
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 121/262 (46%), Gaps = 35/262 (13%)
Query: 167 PCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAI--WQNGDVK 224
P +VSWT I + R + EA A F +M P+ IT L +L A + ++
Sbjct: 50 PIDPIVSWTSSIALHCRNGQLPEAAAEFSRM-QIAGVRPNHITFLTLLSACTDFPLEGLR 108
Query: 225 SCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVE------------ 272
IH Y K G ++ V L+D Y+KCG + A +F+++ V
Sbjct: 109 FGGSIHAYVRKLGLDTENVMVGTALVDMYSKCGQLDLAWLMFDEMHVRNSVSWNTMIDGC 168
Query: 273 -----------------RKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFL 315
++ +SWTS+I GF G ++A+E F MQ G++P+ VT +
Sbjct: 169 MRNGEVGEAIVLFDQMSERDAISWTSMIGGFVKKGCFEQALEWFREMQLAGVEPDYVTII 228
Query: 316 SVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPS 375
SVL AC++ G + GL + ++ V + + +IK LIDM R G + A + +P
Sbjct: 229 SVLAACANLGALGLGL-WINRFVMKQDFKDNIKISNSLIDMYSRCGCIRLARQVFEQMPK 287
Query: 376 EITDVVVWRTLLGACSFHGNVE 397
+V W +++ + +G+ E
Sbjct: 288 R--SLVSWNSMIVGFALNGHAE 307
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 83/184 (45%), Gaps = 28/184 (15%)
Query: 73 DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLF 132
D T ++ CA L LG ++ + K F+ ++ ++ +L++MY G ++ + ++F
Sbjct: 223 DYVTIISVLAACANLGALGLGLWINRFVMKQDFKDNIKISNSLIDMYSRCGCIRLARQVF 282
Query: 133 DEMPERNLVTWNVMITGLVKWGELEFARSLFEEMP------------------------C 168
++MP+R+LV+WN MI G G E A F M
Sbjct: 283 EQMPKRSLVSWNSMIVGFALNGHAEEALEFFNLMRKEGHSGLVDEGLQFFDIMKRTRKIS 342
Query: 169 RNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQL 228
+ + ++D Y+R R +AL + M +P+E+ + ++L A +GDV +
Sbjct: 343 PRIEHYGCLVDLYSRAGRLEDALNVIANMP----MKPNEVVLGSLLAACRTHGDVGLAER 398
Query: 229 IHGY 232
+ Y
Sbjct: 399 LMKY 402
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 67/131 (51%), Gaps = 10/131 (7%)
Query: 276 LVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFD 335
+VSWTS I+ +G EA F RMQ G++PN +TFL++L+AC+ L EGL F
Sbjct: 54 IVSWTSSIALHCRNGQLPEAAAEFSRMQIAGVRPNHITFLTLLSACTDFPL--EGLRFGG 111
Query: 336 KMVEECEVL----PDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACS 391
+ L ++ L+DM + G+L+ A + + + V W T++ C
Sbjct: 112 SIHAYVRKLGLDTENVMVGTALVDMYSKCGQLDLA--WLMFDEMHVRNSVSWNTMIDGCM 169
Query: 392 FHGNVEMGERV 402
+G E+GE +
Sbjct: 170 RNG--EVGEAI 178
>gi|317106766|dbj|BAJ53258.1| JMS10C05.1 [Jatropha curcas]
Length = 563
Score = 240 bits (612), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 147/469 (31%), Positives = 244/469 (52%), Gaps = 66/469 (14%)
Query: 12 NITTQIHSHLLT-TNSLLHHSQLFNTLLHFYSLA-------------ESPQKAFLLYKQL 57
I QIH+ +LT + S L + +L F +L+ + P Y +
Sbjct: 2 QILRQIHARILTHVPPISSVSFLISKILSFAALSPFGNFDYARKIFSQIPNPGIFAYNSV 61
Query: 58 QQ--IYTHSHSPLP------------PLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKV 103
+ +YT S P P ++FT +F+++ C+ + G Q+HA I +
Sbjct: 62 IRGCLYTKIPSKEPIHLFKDMVGKGYPNPNTFTMAFVLKACSIIMALEEGKQIHAQILRS 121
Query: 104 GFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLF 163
GF S YV ++LVN Y K E+ AR +F
Sbjct: 122 GFSSSPYVQSSLVNFYS-------------------------------KCEEITIARKVF 150
Query: 164 EEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDV 223
+E+ RN+V W+ ++ GY R+ NEAL +FR+M EP E++++ VL A G +
Sbjct: 151 DEITERNLVCWSAMVSGYARLGMINEALIMFREMQVVG-IEPDEVSLVGVLSACAMVGAL 209
Query: 224 KSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSII 283
+ +H Y +KR D+ + LI+ YAKCGCI A ++F+++ V K+ +W+S+I
Sbjct: 210 DIGKWVHAYIKKR-MIHVDLELNTALINMYAKCGCIEKAREIFDEMRV--KDSKAWSSMI 266
Query: 284 SGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEV 343
G A+HG+ ++A+ F RM++ KPN VTF+ +L+AC+HGGLV +G ++ M+ E +
Sbjct: 267 VGLAIHGLAEDALNVFSRMEEAQAKPNHVTFIGILSACAHGGLVSDGKRYWSSML-ELGI 325
Query: 344 LPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVT 403
P ++HYGC++D+L R G +++A AL IP+ D V+WRTLL A + + ++ E V
Sbjct: 326 EPSMEHYGCMVDLLCRGGLIDEAYDFALIIPT--PDPVIWRTLLVAYTKNRMLQKAEMVA 383
Query: 404 RKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCS 452
K+LE+E +Y+++ N+ A V + +R++M E +PGC+
Sbjct: 384 GKLLELEPWKAENYIILANLYASVSQLEKVSHVRKMMKENGIKALPGCT 432
>gi|125555946|gb|EAZ01552.1| hypothetical protein OsI_23585 [Oryza sativa Indica Group]
Length = 530
Score = 240 bits (612), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 140/424 (33%), Positives = 227/424 (53%), Gaps = 21/424 (4%)
Query: 45 ESPQKAFLLYKQLQQIYTH--------------SHSPLPPLFDSFTYSFLIRTCATLSHP 90
E P +A +L+ + + Y S + P D T + C+
Sbjct: 109 EMPSRALVLWNMMVRCYIRCGRYSAAVALSEQMERSGVTP--DRVTLVTAVTACSRARDL 166
Query: 91 NLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGL 150
+LG ++H + V F ++ V AL++MY L+++ KLF++MP RN+++W ++++G
Sbjct: 167 SLGRRIHVYMDNV-FGFNLPVANALLDMYTKNDCLEEAVKLFEQMPARNIISWTILVSGY 225
Query: 151 VKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITI 210
G+L+ AR LF + ++++ WT +I+ + EAL LFR M + EP T+
Sbjct: 226 GLAGQLDKARVLFNQCKEKDLILWTAMINACVQHGCFEEALTLFRDM-QMQRVEPDRFTV 284
Query: 211 LAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDIS 270
+ +L G + + IH Y E+R D + LID Y+KCG I + ++F
Sbjct: 285 VTLLTCCANLGALDQGEWIHQYAEQRKMK-IDAVLGTALIDMYSKCGHIEKSLEVF--WR 341
Query: 271 VERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEG 330
++ ++ +WT+II G A +G A+E F MQ+ +KP+ VTF+ VL+AC HGGLV+EG
Sbjct: 342 MQGRDATAWTAIICGLATNGQAGRALELFQDMQRSKVKPDGVTFIGVLSACCHGGLVDEG 401
Query: 331 LNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGAC 390
F M E ++ P ++HY CL+++LGRAG L++AE+ +P + ++ LL AC
Sbjct: 402 RKQFHAMREVYQIEPRVEHYSCLVNLLGRAGLLDEAERLIGDVPINKDAMPLFGALLTAC 461
Query: 391 SFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPG 450
HGNVEM ER+T++I E + +LM N+ A R+ D R+R M K G
Sbjct: 462 KAHGNVEMSERLTKRICEQDSQITDVNLLMSNVYATASRWEDVIRVRGKMAHPTVKKTAG 521
Query: 451 CSLV 454
CSL+
Sbjct: 522 CSLI 525
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 94/370 (25%), Positives = 159/370 (42%), Gaps = 73/370 (19%)
Query: 73 DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLF 132
DSFTY F++R L G + HA K GF+ Y ++L+ MY LG + + K+F
Sbjct: 48 DSFTYPFVLRAVGVLKLSVEGRKAHAAAIKTGFRWDAYTGSSLMEMYTMLGRVDIARKVF 107
Query: 133 DEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALA 192
DEMP R LV WN+M+ ++ G A +L E+M V
Sbjct: 108 DEMPSRALVLWNMMVRCYIRCGRYSAAVALSEQMERSGVT-------------------- 147
Query: 193 LFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDT 252
P +T++ + A + D+ + IH Y + F++ V N L+D
Sbjct: 148 ------------PDRVTLVTAVTACSRARDLSLGRRIHVYMDN--VFGFNLPVANALLDM 193
Query: 253 YAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAM------------------------ 288
Y K C+ A KLFE + +N++SWT ++SG+ +
Sbjct: 194 YTKNDCLEEAVKLFEQMPA--RNIISWTILVSGYGLAGQLDKARVLFNQCKEKDLILWTA 251
Query: 289 -------HGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEEC 341
HG +EA+ F MQ ++P+R T +++L C++ G +++G + + E+
Sbjct: 252 MINACVQHGCFEEALTLFRDMQMQRVEPDRFTVVTLLTCCANLGALDQG-EWIHQYAEQR 310
Query: 342 EVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGER 401
++ D LIDM + G +E++ + + D W ++ C N + G R
Sbjct: 311 KMKIDAVLGTALIDMYSKCGHIEKSLEVFWRMQGR--DATAWTAII--CGLATNGQAG-R 365
Query: 402 VTRKILEMER 411
+M+R
Sbjct: 366 ALELFQDMQR 375
>gi|225457243|ref|XP_002281020.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 580
Score = 240 bits (612), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 140/431 (32%), Positives = 236/431 (54%), Gaps = 46/431 (10%)
Query: 26 SLLHHSQLF--NTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRT 83
S HH LF NT++ YS+++SP A LY+ + + SP +S+T+ F+++
Sbjct: 65 SCTHHPNLFMWNTIIRGYSISDSPITAIALYRDM---FLCGISP-----NSYTFGFVLKA 116
Query: 84 CATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTW 143
C L G +LH+ I KVG + L+ +Y + G +
Sbjct: 117 CCKLLRLCEGQELHSQIVKVGLDFETPLVNGLIKLYAACGCM------------------ 158
Query: 144 NVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYT 203
++A +F+EMP + SW+ ++ GY + ++ EAL LFR+M A E
Sbjct: 159 -------------DYACVMFDEMPEPDSASWSTMVSGYAQNGQAVEALKLFREMQA-ENV 204
Query: 204 EPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSAS 263
T+ +V+ G + + +H Y +K G D+ + L+ Y+KCG + +A
Sbjct: 205 SSDAFTLASVVGVCGDLGALDLGKWVHSYMDKEG-VKIDVVLGTALVGMYSKCGSLDNAL 263
Query: 264 KLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSH 323
K+F+ ++ +++ +W+++I+G+A+HG G++A++ F M++ PN VTF SVL+ACSH
Sbjct: 264 KVFQGMA--ERDVTAWSTMIAGYAIHGHGEKALQLFDAMKRSKTIPNCVTFTSVLSACSH 321
Query: 324 GGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVW 383
GLVE+G F+ M E ++ P IKHYGC++D+ RAG + A K +P E +VV+W
Sbjct: 322 SGLVEKGHQIFETMWTEYKITPQIKHYGCMVDLFCRAGMVGHAHKFIQTMPIE-PNVVLW 380
Query: 384 RTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDER 443
RTLLGAC HG ++GE ++RKIL+++ +YVL+ N+ A +GR+ ++R +M ++
Sbjct: 381 RTLLGACKTHGYKDLGEHISRKILKLDPSSPENYVLVSNVYASLGRWSSVCQVRSLMKDK 440
Query: 444 NAFKVPGCSLV 454
K G S +
Sbjct: 441 APKKQHGWSSI 451
>gi|326518042|dbj|BAK07273.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 527
Score = 240 bits (612), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 144/425 (33%), Positives = 228/425 (53%), Gaps = 23/425 (5%)
Query: 45 ESPQKAFLLYKQLQQIYTH--------------SHSPLPPLFDSFTYSFLIRTCATLSHP 90
E PQ+A +++ + + Y L P D T + C+
Sbjct: 106 EMPQRAVVVWNMMLRCYVRCGRNTEAVALAEEMERGRLTP--DRVTLLTALTACSRAGDL 163
Query: 91 NLGTQLHAVISKV-GFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITG 149
+LG ++HA + V GF + V AL++MYV G L+++ LF++MP RN+V+W +++G
Sbjct: 164 SLGRKIHAYMDGVTGFS--LPVANALLDMYVKNGCLEEAVNLFEKMPSRNVVSWTTLVSG 221
Query: 150 LVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEIT 209
G+++ AR LF + ++++ WT +I+ Y + EAL+LFR M EP T
Sbjct: 222 YAFAGQVDKARLLFHQCTEKDLIMWTAMINAYVQHGCFIEALSLFRDM-QMHQIEPDRFT 280
Query: 210 ILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDI 269
++ +L G + QLIH + E R D + LID YAKCG + + ++FE
Sbjct: 281 VVTLLTCCANLGALDQGQLIHQFAEGRNMK-LDAVLGTALIDMYAKCGHVEKSVEVFE-- 337
Query: 270 SVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEE 329
+E ++ +WT+II G A +G A+E F M++ KP+ VTF+ VL+AC HGGLV+E
Sbjct: 338 RMEGRDTKAWTAIICGLATNGQAGRALELFEDMERSEAKPDSVTFIGVLSACCHGGLVDE 397
Query: 330 GLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGA 389
G F M E + P ++HY CL+++LGRAG+L++AEK IP + ++ L+ A
Sbjct: 398 GRKQFRAMKEVYRIRPRVEHYSCLVNLLGRAGQLDEAEKLIKSIPINKDAMPLFGALITA 457
Query: 390 CSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVP 449
C GNV+M ER+T++I + +LM N+ A R+ D R+R M + K
Sbjct: 458 CKAQGNVKMSERLTKRIGKQGYQIPDVNLLMSNVYATASRWEDVVRVRSKMAHPSVKKNA 517
Query: 450 GCSLV 454
GCSL+
Sbjct: 518 GCSLI 522
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 118/430 (27%), Positives = 181/430 (42%), Gaps = 103/430 (23%)
Query: 73 DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLF 132
DSFTY F++R L G + HA K GF+ Y ++L++MY LG L+ + K+F
Sbjct: 45 DSFTYPFVLRAIGALQISVEGRKAHAATLKTGFRWDAYTASSLMDMYTMLGRLEAARKVF 104
Query: 133 DEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALA 192
DEMP+R +V WN+M+ C Y R R+ EA+A
Sbjct: 105 DEMPQRAVVVWNMMLR-------------------C------------YVRCGRNTEAVA 133
Query: 193 LFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDT 252
L +M T P +T+L L A + GD+ + IH Y + G T F + V N L+D
Sbjct: 134 LAEEMERGRLT-PDRVTLLTALTACSRAGDLSLGRKIHAYMD--GVTGFSLPVANALLDM 190
Query: 253 YAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAM------------------------ 288
Y K GC+ A LFE + +N+VSWT+++SG+A
Sbjct: 191 YVKNGCLEEAVNLFEKMP--SRNVVSWTTLVSGYAFAGQVDKARLLFHQCTEKDLIMWTA 248
Query: 289 -------HGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEEC 341
HG EA+ F MQ ++P+R T +++L C++ G +++G + E
Sbjct: 249 MINAYVQHGCFIEALSLFRDMQMHQIEPDRFTVVTLLTCCANLGALDQG-QLIHQFAEGR 307
Query: 342 EVLPDIKHYGCLIDMLGRAGRLEQ-----------------------AEKTALGIPSEI- 377
+ D LIDM + G +E+ A G E+
Sbjct: 308 NMKLDAVLGTALIDMYAKCGHVEKSVEVFERMEGRDTKAWTAIICGLATNGQAGRALELF 367
Query: 378 ---------TDVVVWRTLLGACSFHGNVEMGERVTRKILEME--RGYGGDYVLMYNILAG 426
D V + +L AC G V+ G + R + E+ R Y + N+L
Sbjct: 368 EDMERSEAKPDSVTFIGVLSACCHGGLVDEGRKQFRAMKEVYRIRPRVEHYSCLVNLLGR 427
Query: 427 VGRFGDAERL 436
G+ +AE+L
Sbjct: 428 AGQLDEAEKL 437
>gi|225444117|ref|XP_002266487.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 553
Score = 240 bits (612), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 145/461 (31%), Positives = 235/461 (50%), Gaps = 28/461 (6%)
Query: 16 QIHSHLLTTNSLLHHSQLFNTLLHFYSLAES-----------PQKAFLLYKQLQQIYTHS 64
++H+H+ T L + N LLH Y P + + L Y +
Sbjct: 95 EVHAHV-TKTGLDSDVYVGNALLHLYGSTGQVTDARRLFDGMPHRDLASWNTLLGAYNDN 153
Query: 65 HSPLPPLFDSFTYS----------FLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTA 114
+ LF Y + C + G ++H + KVG + + ++ A
Sbjct: 154 AVEVLVLFKRMMYEGIGGDHISMVIVFSACGKIGGTEFGKEVHGYVIKVGIRPALSLSNA 213
Query: 115 LVNMYVSLGFLKDSSKLFDEMPE-RNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVS 173
L+ +Y G + + LF EM R++V+ ++ G V G ++ AR +F++M +++VS
Sbjct: 214 LLGVYTKCGEMDAAQSLFVEMAAMRDVVSHTILFNGYVDMGSIDLARGIFDQMSVKDLVS 273
Query: 174 WTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYG 233
W +I Y + +A+ LFRKM E EP E T+++VL A D+++ +L H +
Sbjct: 274 WNSMIHAYVKAKHPKKAIELFRKM-ENEMVEPDETTMVSVLAACASLADLQNGRLAHRFI 332
Query: 234 EKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGK 293
+ D+ V LID YAKCG + A F ++ +++ +WT+ I G A HG G
Sbjct: 333 IQNNPRQ-DLFVGTALIDMYAKCGSLEEAMVTF--YKMDSRDVFTWTTAIEGLANHGHGD 389
Query: 294 EAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCL 353
+A+ F M+K G+KPN+ TF+SVL ACS GLV+EG F +MVE ++ P I+H GCL
Sbjct: 390 KALSLFTEMEKQGIKPNQATFVSVLMACSRSGLVKEGCLLFKRMVEAYQIQPKIEHLGCL 449
Query: 354 IDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGY 413
+D+L RAG L QAE+ +P + ++ +TLL AC H ++GE++ + E+
Sbjct: 450 LDILSRAGLLHQAEEFIKLMPPK-EKIIANKTLLSACMNHLEYDLGEKIANGLTELSSQS 508
Query: 414 GGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
++L+ N A G++ + + RRVM E + KVPG S V
Sbjct: 509 HATHILLSNFYALAGQWAEVAKTRRVMKEIDIRKVPGISSV 549
Score = 131 bits (329), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 113/458 (24%), Positives = 199/458 (43%), Gaps = 82/458 (17%)
Query: 7 SQTPNNITT--QIHSHLLTTNSLLHHSQLFNTLLHFYSLAESPQKAFLLYKQLQQIYTHS 64
+ +P +I Q+ + +TT + +H + +N L+ +S + +P A L+Y +
Sbjct: 13 TASPPDIKVFDQVLTQTITT-AFIHATPTWNCLIRAFSRSPTPITAILIYNH----FIKG 67
Query: 65 HSPLPPLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGF 124
P D +TY +++ C + + G ++HA ++K G S VYV AL+++Y S G
Sbjct: 68 RFVFP---DKYTYPAMLKACWRMGSLSKGKEVHAHVTKTGLDSDVYVGNALLHLYGSTGQ 124
Query: 125 LKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRM 184
+ D+ +LFD MP R+L +WN + + Y
Sbjct: 125 VTDARRLFDGMPHRDLASWNTL-------------------------------LGAYN-- 151
Query: 185 NRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIR 244
+ + E L LF++M+ E I+++ V A + G + + +HGY K G +
Sbjct: 152 DNAVEVLVLFKRMMY-EGIGGDHISMVIVFSACGKIGGTEFGKEVHGYVIKVGIRP-ALS 209
Query: 245 VLNCLIDTYAKCGCIFSASKLFEDISVER------------------------------K 274
+ N L+ Y KCG + +A LF +++ R K
Sbjct: 210 LSNALLGVYTKCGEMDAAQSLFVEMAAMRDVVSHTILFNGYVDMGSIDLARGIFDQMSVK 269
Query: 275 NLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFF 334
+LVSW S+I + K+A+E F +M+ ++P+ T +SVL AC+ ++ G
Sbjct: 270 DLVSWNSMIHAYVKAKHPKKAIELFRKMENEMVEPDETTMVSVLAACASLADLQNG-RLA 328
Query: 335 DKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHG 394
+ + + D+ LIDM + G LE+A T + S DV W T + + HG
Sbjct: 329 HRFIIQNNPRQDLFVGTALIDMYAKCGSLEEAMVTFYKMDSR--DVFTWTTAIEGLANHG 386
Query: 395 NVEMGERVTRKILEMER-GYGGDYVLMYNILAGVGRFG 431
+ G++ EME+ G + ++L R G
Sbjct: 387 H---GDKALSLFTEMEKQGIKPNQATFVSVLMACSRSG 421
>gi|297828247|ref|XP_002882006.1| hypothetical protein ARALYDRAFT_903976 [Arabidopsis lyrata subsp.
lyrata]
gi|297327845|gb|EFH58265.1| hypothetical protein ARALYDRAFT_903976 [Arabidopsis lyrata subsp.
lyrata]
Length = 412
Score = 240 bits (612), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 131/343 (38%), Positives = 206/343 (60%), Gaps = 8/343 (2%)
Query: 114 ALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVS 173
++++ YV G ++D+ LFD MP R++VT MI G K G + A++LF++MP R+VV+
Sbjct: 56 SMIDGYVKHGRIEDAKGLFDVMPRRDVVTCATMIDGYAKLGFVHQAKTLFDQMPLRDVVA 115
Query: 174 WTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGY- 232
+ ++ GY + EAL +F M + P E T++ +L AI Q G + +H Y
Sbjct: 116 YNSMMAGYVQNKCHMEALEIFNDMEKESHLSPDETTLVIILSAIAQLGRLSKATDMHLYI 175
Query: 233 GEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMG 292
EK+ + + V LID Y+KCG I A +FE I E K++ W ++I G A+HG+G
Sbjct: 176 VEKQFYLGGKLGV--ALIDMYSKCGSIQHAMLVFEGI--ENKSIDHWNAMIGGLAVHGLG 231
Query: 293 KEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGC 352
+ A +++++ + P+ +TF+ VLNACSH GLV+EGL F+ M + ++ P ++HYGC
Sbjct: 232 ESAFNMLLQIERLSIIPDDITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGC 291
Query: 353 LIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERG 412
++D+L R+G +E A+ +P E D V+WRT L ACS H E GE V + ++ ++ G
Sbjct: 292 MVDILSRSGSIELAKNLIEEMPIEPND-VIWRTFLTACSHHKEFETGELVAKHLI-LQAG 349
Query: 413 YG-GDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
Y YVL+ N+ A G + D R+R +M ER K+PGCS +
Sbjct: 350 YNPSSYVLLSNMYASFGMWKDVRRVRTMMKERKIEKIPGCSWI 392
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 53/256 (20%), Positives = 105/256 (41%), Gaps = 40/256 (15%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+N+++ Y + +A ++ +++ S L P D T ++ A L +
Sbjct: 116 YNSMMAGYVQNKCHMEALEIFNDMEK-----ESHLSP--DETTLVIILSAIAQLGRLSKA 168
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
T +H I + F + AL++MY G ++ + +F+ + +++ WN MI GL
Sbjct: 169 TDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAVH 228
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
G E A ++ ++ E L++ P +IT + V
Sbjct: 229 GLGESAFNMLLQI----------------------ERLSII----------PDDITFVGV 256
Query: 214 LPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVER 273
L A +G VK L ++ ++ C++D ++ G I A L E++ +E
Sbjct: 257 LNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDILSRSGSIELAKNLIEEMPIE- 315
Query: 274 KNLVSWTSIISGFAMH 289
N V W + ++ + H
Sbjct: 316 PNDVIWRTFLTACSHH 331
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 87/201 (43%), Gaps = 38/201 (18%)
Query: 242 DIRVLNCLIDTYAKCGCIFSASKLFEDISVER---------------------------- 273
D+ N +ID Y K G I A LF D+ R
Sbjct: 50 DLISWNSMIDGYVKHGRIEDAKGLF-DVMPRRDVVTCATMIDGYAKLGFVHQAKTLFDQM 108
Query: 274 --KNLVSWTSIISGFAMHGMGKEAVENFGRMQKVG-LKPNRVTFLSVLNACSHGGLVEEG 330
+++V++ S+++G+ + EA+E F M+K L P+ T + +L+A + G + +
Sbjct: 109 PLRDVVAYNSMMAGYVQNKCHMEALEIFNDMEKESHLSPDETTLVIILSAIAQLGRLSKA 168
Query: 331 LNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGAC 390
+ +VE+ L K LIDM + G ++ A GI ++ D W ++G
Sbjct: 169 TDMHLYIVEKQFYLGG-KLGVALIDMYSKCGSIQHAMLVFEGIENKSID--HWNAMIGGL 225
Query: 391 SFHGNVEMGERVTRKILEMER 411
+ HG +GE +L++ER
Sbjct: 226 AVHG---LGESAFNMLLQIER 243
Score = 42.7 bits (99), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 45/86 (52%), Gaps = 11/86 (12%)
Query: 255 KCGCIFS-ASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNR-- 311
KC C S ASKLF ++ K+L+SW S+I G+ HG ++A F M P R
Sbjct: 31 KCRCNCSIASKLFAEMP--EKDLISWNSMIDGYVKHGRIEDAKGLFDVM------PRRDV 82
Query: 312 VTFLSVLNACSHGGLVEEGLNFFDKM 337
VT ++++ + G V + FD+M
Sbjct: 83 VTCATMIDGYAKLGFVHQAKTLFDQM 108
>gi|224066751|ref|XP_002302197.1| predicted protein [Populus trichocarpa]
gi|222843923|gb|EEE81470.1| predicted protein [Populus trichocarpa]
Length = 440
Score = 240 bits (612), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 139/344 (40%), Positives = 200/344 (58%), Gaps = 10/344 (2%)
Query: 113 TALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVV 172
T +++ Y S G ++ + LF++MP+RN W+ MI+G K G ++ AR++F+ +P RN+V
Sbjct: 91 TVMIDGYASKGEMEAARLLFEDMPQRNFFVWSSMISGYCKIGNVKEARAIFDRVPVRNLV 150
Query: 173 SWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGY 232
+W +I GY++ EAL F KM Y EP E+T++ VL A Q + + +H
Sbjct: 151 NWNSLICGYSQNGFCEEALDAFGKMQNEGY-EPDEVTVVGVLSACAQLSLLDVGKDVHKM 209
Query: 233 GEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMG 292
+G + V+N L+D YAKCG + A +FE ++ KN W S+ISGFA+HG
Sbjct: 210 ICAKGMKLNEF-VVNALVDMYAKCGDLTGARLIFERMT--NKNNACWNSMISGFAVHGKT 266
Query: 293 KEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGC 352
KEA+E FGRM++ KP+ +TFLSVL+AC HGG VE GL F KM E + IKHYGC
Sbjct: 267 KEALEFFGRMEESNEKPDEITFLSVLSACVHGGFVEVGLEIFSKM-ERYGLSASIKHYGC 325
Query: 353 LIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKIL----E 408
L+D+LGRAGR++ A +P + D VW LGAC H + +M E+V +
Sbjct: 326 LVDLLGRAGRIQDAYHLIKSMPMKPND-TVWGAFLGACRIHMDNDMVEQVVEDVCTSDSS 384
Query: 409 MERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCS 452
++ G Y L+ NI AG G + A R+ VM +R K G S
Sbjct: 385 VDSGNDPHYALLLNIYAGSGSWEKAGRVSMVMADRGLQKTSGRS 428
Score = 141 bits (355), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 110/363 (30%), Positives = 175/363 (48%), Gaps = 57/363 (15%)
Query: 118 MYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGI 177
MY G + DS KLF+ MPERN+VTWN MI+G K G+++ A LF++M RN VSW +
Sbjct: 1 MYAKCGDIPDSRKLFEYMPERNVVTWNAMISGYGKNGDMKSASVLFDKMSTRNAVSWIEM 60
Query: 178 IDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRG 237
IDG+ RS + +A R + + +T ++ G++++ +L+ +R
Sbjct: 61 IDGFA---RSGDMVAARRTFNEVPFELKNVVTWTVMIDGYASKGEMEAARLLFEDMPQRN 117
Query: 238 FTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVE 297
F V + +I Y K G + A +F+ + V +NLV+W S+I G++ +G +EA++
Sbjct: 118 FF-----VWSSMISGYCKIGNVKEARAIFDRVPV--RNLVNWNSLICGYSQNGFCEEALD 170
Query: 298 NFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHY--GCLID 355
FG+MQ G +P+ VT + VL+AC+ L++ G + KM+ C + + L+D
Sbjct: 171 AFGKMQNEGYEPDEVTVVGVLSACAQLSLLDVGKDVH-KMI--CAKGMKLNEFVVNALVD 227
Query: 356 MLGRAGRLEQAE---------------------------KTALGI------PSEITDVVV 382
M + G L A K AL +E D +
Sbjct: 228 MYAKCGDLTGARLIFERMTNKNNACWNSMISGFAVHGKTKEALEFFGRMEESNEKPDEIT 287
Query: 383 WRTLLGACSFHGNVEMGERVTRKILEMERGYG-----GDYVLMYNILAGVGRFGDAERLR 437
+ ++L AC G VE+G + K MER YG Y + ++L GR DA L
Sbjct: 288 FLSVLSACVHGGFVEVGLEIFSK---MER-YGLSASIKHYGCLVDLLGRAGRIQDAYHLI 343
Query: 438 RVM 440
+ M
Sbjct: 344 KSM 346
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 112/264 (42%), Gaps = 43/264 (16%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+N+L+ YS ++A + ++Q + P D T ++ CA LS ++G
Sbjct: 152 WNSLICGYSQNGFCEEALDAFGKMQN---EGYEP-----DEVTVVGVLSACAQLSLLDVG 203
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
+H +I G + + +V ALV+MY G L + +F+ M +N WN MI+G
Sbjct: 204 KDVHKMICAKGMKLNEFVVNALVDMYAKCGDLTGARLIFERMTNKNNACWNSMISGFAVH 263
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
G+ + A F RM SNE +P EIT L+V
Sbjct: 264 GKTKEALEFF------------------GRMEESNE--------------KPDEITFLSV 291
Query: 214 LPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVER 273
L A G V+ I E+ G +A I+ CL+D + G I A L + + ++
Sbjct: 292 LSACVHGGFVEVGLEIFSKMERYGLSA-SIKHYGCLVDLLGRAGRIQDAYHLIKSMPMKP 350
Query: 274 KNLVSWTSIISGFAMHGMGKEAVE 297
+ V W + + +H M + VE
Sbjct: 351 NDTV-WGAFLGACRIH-MDNDMVE 372
>gi|218196348|gb|EEC78775.1| hypothetical protein OsI_19008 [Oryza sativa Indica Group]
Length = 580
Score = 240 bits (612), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 138/383 (36%), Positives = 211/383 (55%), Gaps = 33/383 (8%)
Query: 70 PLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSS 129
P D+ + SF ++ A S + QLHA++ ++G + V + T L++ Y G L +
Sbjct: 100 PRPDALSLSFALKASARCSDAHTTVQLHALVLRLGVAADVRLLTTLLDSYAKCGDLASAR 159
Query: 130 KLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNE 189
K+FDEM R++ TWN ++ GL + E A +LF R+ S
Sbjct: 160 KVFDEMTVRDVATWNSLLAGLAQGTEPNLALALFH------------------RLANS-- 199
Query: 190 ALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCL 249
F+++ + E EP+E+TI+A L A Q G +K +H + ++ G ++RV N L
Sbjct: 200 ----FQELPSRE--EPNEVTIVAALSACAQIGLLKDGMYVHEFAKRFGLDR-NVRVCNSL 252
Query: 250 IDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKP 309
ID Y+KCG + A +F I E + LVS+ + I +MHG G +A+ F M ++P
Sbjct: 253 IDMYSKCGSLSRALDVFHSIKPEDRTLVSYNAAIQAHSMHGHGGDALRLFDEM-PTRIEP 311
Query: 310 NRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKT 369
+ VT+L+VL C+H GLV++GL F+ M V P++KHYG ++D+LGRAGRL +A T
Sbjct: 312 DGVTYLAVLCGCNHSGLVDDGLRVFNSM----RVAPNMKHYGTIVDLLGRAGRLTEAYDT 367
Query: 370 ALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGR 429
+ +P D+V+W+TLLGA HG VE+ E K+ E+ GDYVL+ N+ A R
Sbjct: 368 VISMPFP-ADIVLWQTLLGAAKMHGVVELAELAANKLAELGSNVDGDYVLLSNVYASKAR 426
Query: 430 FGDAERLRRVMDERNAFKVPGCS 452
+ D R+R M + KVPG S
Sbjct: 427 WMDVGRVRDTMRSNDVRKVPGFS 449
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 72/169 (42%), Gaps = 7/169 (4%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+N+LL + P A L+ +L + S P + T + CA + G
Sbjct: 173 WNSLLAGLAQGTEPNLALALFHRLANSFQELPSREEP--NEVTIVAALSACAQIGLLKDG 230
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEM-PE-RNLVTWNVMITGLV 151
+H + G +V V +L++MY G L + +F + PE R LV++N I
Sbjct: 231 MYVHEFAKRFGLDRNVRVCNSLIDMYSKCGSLSRALDVFHSIKPEDRTLVSYNAAIQAHS 290
Query: 152 KWGELEFARSLFEEMPCR---NVVSWTGIIDGYTRMNRSNEALALFRKM 197
G A LF+EMP R + V++ ++ G ++ L +F M
Sbjct: 291 MHGHGGDALRLFDEMPTRIEPDGVTYLAVLCGCNHSGLVDDGLRVFNSM 339
>gi|414887370|tpg|DAA63384.1| TPA: hypothetical protein ZEAMMB73_689576 [Zea mays]
Length = 802
Score = 239 bits (611), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 130/387 (33%), Positives = 216/387 (55%), Gaps = 9/387 (2%)
Query: 72 FDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGF----QSHVYVNTALVNMYVSLGFLKD 127
D FT++ ++ CA + G +H I ++ ++ + VN ALV Y G +
Sbjct: 292 LDEFTFTSVLSACANVGLFAHGKSVHGQIIRLQPNFVPEAALPVNNALVTFYSKCGNIAV 351
Query: 128 SSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRS 187
+ ++FD M +++V+WN +++G V+ L+ A +FEEMP +N +SW ++ GY +
Sbjct: 352 ARRIFDNMTLKDVVSWNTILSGYVESSCLDKAVEVFEEMPYKNELSWMVMVSGYVHGGFA 411
Query: 188 NEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLN 247
+AL LF KM + E +P + T + A + G +K + +HG+ + GF + N
Sbjct: 412 EDALKLFNKMRS-ENVKPCDYTYAGAIAACGELGALKHGKQLHGHIVQLGFEGSN-SAGN 469
Query: 248 CLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGL 307
LI YA+CG + A +F + + + VSW ++IS HG G+EA+E F RM G+
Sbjct: 470 ALITMYARCGAVKEAHLMF--LVMPNIDSVSWNAMISALGQHGHGREALELFDRMVAEGI 527
Query: 308 KPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAE 367
P+R++FL+VL AC+H GLV+EG +F+ M + ++P HY LID+LGRAGR+ +A
Sbjct: 528 YPDRISFLTVLTACNHSGLVDEGFRYFESMKRDFGIIPGEDHYTRLIDLLGRAGRIGEAR 587
Query: 368 KTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGV 427
+P E T +W +L C G++E+G ++ +M + G Y+L+ N +
Sbjct: 588 DLIKTMPFEPTP-SIWEAILSGCRTSGDMELGAHAADQLFKMTPQHDGTYILLSNTYSAA 646
Query: 428 GRFGDAERLRRVMDERNAFKVPGCSLV 454
G + DA R+R++M +R K PGCS +
Sbjct: 647 GCWVDAARVRKLMRDRGVKKEPGCSWI 673
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 128/489 (26%), Positives = 212/489 (43%), Gaps = 99/489 (20%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNL 92
L N ++ Y+ A A +++ L + + S P D ++++ L+ L PN+
Sbjct: 123 LHNAVISAYARASHAAPAVAVFRSL--LASGSLRP-----DDYSFTALLSAGGHL--PNI 173
Query: 93 G----TQLHAVISKVGFQSHVYVNTALVNMYV---SLGFLKDSSKLFDEMPERNLVTWNV 145
QLH + K G + V ALV +Y+ S +D+ K+ DEMP ++ +TW
Sbjct: 174 SVRHCAQLHCSVLKSGAGGALSVCNALVALYMKCESPEATRDARKVLDEMPNKDDLTWTT 233
Query: 146 MITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEP 205
M+ G V+ G++ ARS+FEE+ + V W +I GY + EA LFR+MV E
Sbjct: 234 MVVGYVRRGDVGAARSVFEEVDGKFDVVWNAMISGYVHSGMAVEAFELFRRMV-LERVPL 292
Query: 206 SEITILAVLPAIWQNGDVKSCQLIHGYG---EKRGFTAFDIRVLNCLIDTYAKCGCIFSA 262
E T +VL A G + +HG + + V N L+ Y+KCG I A
Sbjct: 293 DEFTFTSVLSACANVGLFAHGKSVHGQIIRLQPNFVPEAALPVNNALVTFYSKCGNIAVA 352
Query: 263 SKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACS 322
++F+++++ K++VSW +I+SG+ +AVE F M N ++++ +++
Sbjct: 353 RRIFDNMTL--KDVVSWNTILSGYVESSCLDKAVEVFEEMP----YKNELSWMVMVSGYV 406
Query: 323 HGGLVEEGLNFFDKMVEE---------------CEVLPDIKH----YG------------ 351
HGG E+ L F+KM E C L +KH +G
Sbjct: 407 HGGFAEDALKLFNKMRSENVKPCDYTYAGAIAACGELGALKHGKQLHGHIVQLGFEGSNS 466
Query: 352 ---CLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGN----VEMGERVT- 403
LI M R G +++A L +P+ D V W ++ A HG+ +E+ +R+
Sbjct: 467 AGNALITMYARCGAVKEAHLMFLVMPN--IDSVSWNAMISALGQHGHGREALELFDRMVA 524
Query: 404 ---------------------------RKILEMERGYG-----GDYVLMYNILAGVGRFG 431
R M+R +G Y + ++L GR G
Sbjct: 525 EGIYPDRISFLTVLTACNHSGLVDEGFRYFESMKRDFGIIPGEDHYTRLIDLLGRAGRIG 584
Query: 432 DAERLRRVM 440
+A L + M
Sbjct: 585 EARDLIKTM 593
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 79/323 (24%), Positives = 134/323 (41%), Gaps = 52/323 (16%)
Query: 108 HVYVNTALVNMYVSLGFLKDSSKLF--DEMPERNLVTWNVMITGLVKWGELEFARSLFEE 165
H ++ L+++Y L ++ LF D P V+ ++ L A S F+
Sbjct: 58 HPHLTLRLIHLYTLSRDLPAAATLFCADPCP----VSATSLVAAYAAADRLPAAVSFFDA 113
Query: 166 MPC--RNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQ--NG 221
+P R+ V +I Y R + + A+A+FR ++A P + + A+L A N
Sbjct: 114 VPPARRDTVLHNAVISAYARASHAAPAVAVFRSLLASGSLRPDDYSFTALLSAGGHLPNI 173
Query: 222 DVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKC------------------------- 256
V+ C +H K G + V N L+ Y KC
Sbjct: 174 SVRHCAQLHCSVLKSG-AGGALSVCNALVALYMKCESPEATRDARKVLDEMPNKDDLTWT 232
Query: 257 ---------GCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGL 307
G + +A +FE+ V+ K V W ++ISG+ GM EA E F RM +
Sbjct: 233 TMVVGYVRRGDVGAARSVFEE--VDGKFDVVWNAMISGYVHSGMAVEAFELFRRMVLERV 290
Query: 308 KPNRVTFLSVLNACSHGGLVEEGLNFFDKMVE-ECEVLPD--IKHYGCLIDMLGRAGRLE 364
+ TF SVL+AC++ GL G + +++ + +P+ + L+ + G +
Sbjct: 291 PLDEFTFTSVLSACANVGLFAHGKSVHGQIIRLQPNFVPEAALPVNNALVTFYSKCGNIA 350
Query: 365 QAEKTALGIPSEITDVVVWRTLL 387
A + + + DVV W T+L
Sbjct: 351 VARRIFDNM--TLKDVVSWNTIL 371
>gi|220061997|gb|ACL79586.1| pentatricopeptide repeat protein [Oryza sativa Japonica Group]
Length = 587
Score = 239 bits (611), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 138/383 (36%), Positives = 211/383 (55%), Gaps = 33/383 (8%)
Query: 70 PLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSS 129
P D+ + SF ++ A S + QLHA++ ++G + V + T L++ Y G L +
Sbjct: 107 PRPDALSLSFALKASARCSDAHTTVQLHALVLRLGVAADVRLLTTLLDSYAKCGDLASAR 166
Query: 130 KLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNE 189
K+FDEM R++ TWN ++ GL + E A +LF R+ S
Sbjct: 167 KVFDEMTVRDVATWNSLLAGLAQGTEPNLALALFH------------------RLANS-- 206
Query: 190 ALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCL 249
F+++ + E EP+E+TI+A L A Q G +K +H + ++ G ++RV N L
Sbjct: 207 ----FQELPSRE--EPNEVTIVAALSACAQIGLLKDGMYVHEFAKRFGLDR-NVRVCNSL 259
Query: 250 IDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKP 309
ID Y+KCG + A +F I E + LVS+ + I +MHG G +A+ F M ++P
Sbjct: 260 IDMYSKCGSLSRALDVFHSIKPEDQTLVSYNAAIQAHSMHGHGGDALRLFDEM-PTRIEP 318
Query: 310 NRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKT 369
+ VT+L+VL C+H GLV++GL F+ M V P++KHYG ++D+LGRAGRL +A T
Sbjct: 319 DGVTYLAVLCGCNHSGLVDDGLRVFNSM----RVAPNMKHYGTIVDLLGRAGRLTEAYDT 374
Query: 370 ALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGR 429
+ +P D+V+W+TLLGA HG VE+ E K+ E+ GDYVL+ N+ A R
Sbjct: 375 VISMPFP-ADIVLWQTLLGAAKMHGVVELAELAANKLAELGSNVDGDYVLLSNVYASKAR 433
Query: 430 FGDAERLRRVMDERNAFKVPGCS 452
+ D R+R M + KVPG S
Sbjct: 434 WMDVGRVRDTMRSNDVRKVPGFS 456
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 72/169 (42%), Gaps = 7/169 (4%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+N+LL + P A L+ +L + S P + T + CA + G
Sbjct: 180 WNSLLAGLAQGTEPNLALALFHRLANSFQELPSREEP--NEVTIVAALSACAQIGLLKDG 237
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEM-PE-RNLVTWNVMITGLV 151
+H + G +V V +L++MY G L + +F + PE + LV++N I
Sbjct: 238 MYVHEFAKRFGLDRNVRVCNSLIDMYSKCGSLSRALDVFHSIKPEDQTLVSYNAAIQAHS 297
Query: 152 KWGELEFARSLFEEMPCR---NVVSWTGIIDGYTRMNRSNEALALFRKM 197
G A LF+EMP R + V++ ++ G ++ L +F M
Sbjct: 298 MHGHGGDALRLFDEMPTRIEPDGVTYLAVLCGCNHSGLVDDGLRVFNSM 346
>gi|297734119|emb|CBI15366.3| unnamed protein product [Vitis vinifera]
Length = 783
Score = 239 bits (611), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 143/421 (33%), Positives = 231/421 (54%), Gaps = 44/421 (10%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+N LL Y+ P+KA LY Q+ + S L P D FT L+ C+ + + G
Sbjct: 278 WNALLCGYAQNSDPRKALDLYLQM------TDSGLDP--DWFTIGSLLLACSRMKSLHYG 329
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
++H + G ++ +L+++Y+ G K F
Sbjct: 330 EEIHGFALRNGLAVDPFIGISLLSLYICCG------KPF--------------------- 362
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
A+ LF+ M R++VSW +I GY++ +EA+ LFR+M++ + +P EI I+ V
Sbjct: 363 ----AAQVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLS-DGIQPYEIAIMCV 417
Query: 214 LPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVER 273
A Q ++ + +H + K T DI V + +ID YAK GCI + ++F+ +
Sbjct: 418 CGACSQLSALRLGKELHCFALKAHLTE-DIFVSSSIIDMYAKGGCIGLSQRIFD--RLRE 474
Query: 274 KNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNF 333
K++ SW II+G+ +HG GKEA+E F +M ++GLKP+ TF +L ACSH GLVE+GL +
Sbjct: 475 KDVASWNVIIAGYGIHGRGKEALELFEKMLRLGLKPDDFTFTGILMACSHAGLVEDGLEY 534
Query: 334 FDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFH 393
F++M+ + P ++HY C++DMLGRAGR++ A + +P + D +W +LL +C H
Sbjct: 535 FNQMLNLHNIEPKLEHYTCVVDMLGRAGRIDDALRLIEEMPGD-PDSRIWSSLLSSCRIH 593
Query: 394 GNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSL 453
GN+ +GE+V K+LE+E +YVL+ N+ AG G++ D R+R M + K GCS
Sbjct: 594 GNLGLGEKVANKLLELEPEKPENYVLISNLFAGSGKWDDVRRVRGRMKDIGLQKDAGCSW 653
Query: 454 V 454
+
Sbjct: 654 I 654
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 92/379 (24%), Positives = 169/379 (44%), Gaps = 50/379 (13%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+N ++ Y+ E + A ++ +L I H P D+FT +I+ CA L LG
Sbjct: 175 WNAIVSAYTRNELFEDAMSIFSEL--ISVTEHKP-----DNFTLPCVIKACAGLLDLGLG 227
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSK-LFDEMPERNLVTWNVMITGLVK 152
+H + +K+ S V+V AL+ MY G ++++ K +FD M + + +WN ++
Sbjct: 228 QIIHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKRVFDLMDTKTVSSWNALLC---- 283
Query: 153 WGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILA 212
GY + + +AL L+ +M +P TI +
Sbjct: 284 ---------------------------GYAQNSDPRKALDLYLQMTD-SGLDPDWFTIGS 315
Query: 213 VLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVE 272
+L A + + + IHG+ + G A D + L+ Y CG F+A LF+ +E
Sbjct: 316 LLLACSRMKSLHYGEEIHGFALRNGL-AVDPFIGISLLSLYICCGKPFAAQVLFD--GME 372
Query: 273 RKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEG-- 330
++LVSW +I+G++ +G+ EA+ F +M G++P + + V ACS + G
Sbjct: 373 HRSLVSWNVMIAGYSQNGLPDEAINLFRQMLSDGIQPYEIAIMCVCGACSQLSALRLGKE 432
Query: 331 LNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGAC 390
L+ F + + DI +IDM + G + +++ + + DV W ++
Sbjct: 433 LHCF---ALKAHLTEDIFVSSSIIDMYAKGGCIGLSQRIFDRLREK--DVASWNVIIAGY 487
Query: 391 SFHGNVEMGERVTRKILEM 409
HG + + K+L +
Sbjct: 488 GIHGRGKEALELFEKMLRL 506
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 111/244 (45%), Gaps = 34/244 (13%)
Query: 80 LIRTCATLSHPNLGTQLHAVIS-KVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPER 138
L++ C +G +LH ++S F + +NT ++ MY G DS +FD++ +
Sbjct: 111 LLQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLRRK 170
Query: 139 NLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMV 198
NL W I+ YTR +A+++F +++
Sbjct: 171 NLF-------------------------------QWNAIVSAYTRNELFEDAMSIFSELI 199
Query: 199 ACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGC 258
+ +P T+ V+ A D+ Q+IHG K + D+ V N LI Y KCG
Sbjct: 200 SVTEHKPDNFTLPCVIKACAGLLDLGLGQIIHGMATKMDLVS-DVFVGNALIAMYGKCGL 258
Query: 259 IFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVL 318
+ A K D+ ++ K + SW +++ G+A + ++A++ + +M GL P+ T S+L
Sbjct: 259 VEEAVKRVFDL-MDTKTVSSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLL 317
Query: 319 NACS 322
ACS
Sbjct: 318 LACS 321
>gi|297828249|ref|XP_002882007.1| hypothetical protein ARALYDRAFT_483672 [Arabidopsis lyrata subsp.
lyrata]
gi|297327846|gb|EFH58266.1| hypothetical protein ARALYDRAFT_483672 [Arabidopsis lyrata subsp.
lyrata]
Length = 606
Score = 239 bits (611), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 131/344 (38%), Positives = 206/344 (59%), Gaps = 8/344 (2%)
Query: 113 TALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVV 172
++++ YV G ++D+ LFD MP R++VT MI G K G + A++LF++MP R+VV
Sbjct: 249 NSMIDGYVKHGRIEDAKGLFDVMPRRDVVTCATMIDGYAKLGFVHQAKTLFDQMPLRDVV 308
Query: 173 SWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGY 232
++ ++ GY + EAL +F M + P E T++ +L AI Q G + +H Y
Sbjct: 309 AYNSMMAGYVQNKCHMEALEIFNDMEKESHLSPDETTLVIILSAIAQLGRLSKATDMHLY 368
Query: 233 -GEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGM 291
EK+ + + V LID Y+KCG I A +FE I E K++ W ++I G A+HG+
Sbjct: 369 IVEKQFYLGGKLGV--ALIDMYSKCGSIQHAMLVFEGI--ENKSIDHWNAMIGGLAVHGL 424
Query: 292 GKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYG 351
G+ A +++++ + P+ +TF+ VLNACSH GLV+EGL F+ M + ++ P ++HYG
Sbjct: 425 GESAFNMLLQIERLSIIPDDITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYG 484
Query: 352 CLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMER 411
C++D+L R+G +E A+ +P E D V+WRT L ACS H E GE V + ++ ++
Sbjct: 485 CMVDILSRSGSIELAKNLIEEMPIEPND-VIWRTFLTACSHHKEFETGELVAKHLI-LQA 542
Query: 412 GYG-GDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
GY YVL+ N+ A G + D R+R +M ER K+PGCS +
Sbjct: 543 GYNPSSYVLLSNMYASFGMWKDVRRVRTMMKERKIEKIPGCSWI 586
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 103/382 (26%), Positives = 196/382 (51%), Gaps = 28/382 (7%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNL 92
L+N ++ +S + P++A LL+ + + D F+ S +++ C+ L
Sbjct: 81 LWNAVIKSHSHGKDPRQALLLFCLMLENGVS--------VDKFSLSLVLKACSRLGFVKG 132
Query: 93 GTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVK 152
G Q+H + K G S +++ L+ +Y+ G L + ++FD MP+R+ V++N MI G VK
Sbjct: 133 GMQIHGFLRKTGLWSDLFLQNCLIGLYLKCGCLGFARQMFDRMPQRDSVSYNSMINGYVK 192
Query: 153 WGELEFARSLFEEMP--CRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITI 210
G +E AR LF+ MP +N++SW +I GY +++E + + K+ A E E I+
Sbjct: 193 CGLIESARELFDLMPREMKNLISWNSMISGYA---QTSEGVNIASKLFA-EMPEKDLISW 248
Query: 211 LAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDIS 270
+++ ++G ++ + + +R D+ +ID YAK G + A LF+ +
Sbjct: 249 NSMIDGYVKHGRIEDAKGLFDVMPRR-----DVVTCATMIDGYAKLGFVHQAKTLFDQMP 303
Query: 271 VERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVG-LKPNRVTFLSVLNACSHGGLVEE 329
+ +++V++ S+++G+ + EA+E F M+K L P+ T + +L+A + G + +
Sbjct: 304 L--RDVVAYNSMMAGYVQNKCHMEALEIFNDMEKESHLSPDETTLVIILSAIAQLGRLSK 361
Query: 330 GLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGA 389
+ +VE+ L K LIDM + G ++ A GI ++ D W ++G
Sbjct: 362 ATDMHLYIVEKQFYLGG-KLGVALIDMYSKCGSIQHAMLVFEGIENKSID--HWNAMIGG 418
Query: 390 CSFHGNVEMGERVTRKILEMER 411
+ HG +GE +L++ER
Sbjct: 419 LAVHG---LGESAFNMLLQIER 437
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/256 (19%), Positives = 105/256 (41%), Gaps = 40/256 (15%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+N+++ Y + +A ++ +++ S L P D T ++ A L +
Sbjct: 310 YNSMMAGYVQNKCHMEALEIFNDMEK-----ESHLSP--DETTLVIILSAIAQLGRLSKA 362
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
T +H I + F + AL++MY G ++ + +F+ + +++ WN MI GL
Sbjct: 363 TDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAVH 422
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
G E A ++ ++ +++ P +IT + V
Sbjct: 423 GLGESAFNMLLQIERLSII--------------------------------PDDITFVGV 450
Query: 214 LPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVER 273
L A +G VK L ++ ++ C++D ++ G I A L E++ +E
Sbjct: 451 LNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDILSRSGSIELAKNLIEEMPIEP 510
Query: 274 KNLVSWTSIISGFAMH 289
+++ W + ++ + H
Sbjct: 511 NDVI-WRTFLTACSHH 525
>gi|125591422|gb|EAZ31772.1| hypothetical protein OsJ_15924 [Oryza sativa Japonica Group]
Length = 855
Score = 239 bits (611), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 124/381 (32%), Positives = 209/381 (54%), Gaps = 4/381 (1%)
Query: 72 FDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKL 131
D F + LI C LG QLH++ K G + V+ +L+++Y G L+++ +
Sbjct: 359 IDQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFV 418
Query: 132 FDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEAL 191
F M ER++V+W MIT + G + AR F+ M RN ++W ++ Y + + L
Sbjct: 419 FSSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMATRNAITWNAMLGAYIQHGAEEDGL 478
Query: 192 ALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLID 251
++ M++ + P +T + + G K I G+ K G ++ V N I
Sbjct: 479 KMYSAMLSQKDVTPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLI-LNVSVANAAIT 537
Query: 252 TYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNR 311
Y+KCG I A KLF+ ++ K++VSW ++I+G++ HGMGK+A + F M G KP+
Sbjct: 538 MYSKCGRISEAQKLFDLLN--GKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDY 595
Query: 312 VTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTAL 371
+++++VL+ CSH GLV+EG +FD M + P ++H+ C++D+LGRAG L +A+
Sbjct: 596 ISYVAVLSGCSHSGLVQEGKLYFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLID 655
Query: 372 GIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFG 431
+P + T VW LL AC HGN E+ E + + E++ G Y+L+ I + G+
Sbjct: 656 KMPMKPT-AEVWGALLSACKIHGNDELAELAAKHVFELDSPDSGSYMLLAKIYSDAGKSD 714
Query: 432 DAERLRRVMDERNAFKVPGCS 452
D+ ++R++M ++ K PG S
Sbjct: 715 DSAQVRKLMRDKGIKKNPGYS 735
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 86/370 (23%), Positives = 174/370 (47%), Gaps = 28/370 (7%)
Query: 72 FDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKL 131
DS TY+ + CA L G QLHA + + Q YV +AL+ +Y G K++ ++
Sbjct: 258 LDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRV 317
Query: 132 FDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCR----NVVSWTGIIDG-YTRMNR 186
F+ + +RN V+W V+I G +++ + LF +M + + +I G + RM+
Sbjct: 318 FNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGCFNRMD- 376
Query: 187 SNEALALFRKM--VACEYTEPSEITILAVLPAIWQN-GDVKSCQLIHGYGEKRGFTAFDI 243
L L R++ + + I + L +++ GD+++ + + +R DI
Sbjct: 377 ----LCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSER-----DI 427
Query: 244 RVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRM- 302
+I Y++ G I A + F+ ++ +N ++W +++ + HG ++ ++ + M
Sbjct: 428 VSWTSMITAYSQIGNIIKAREFFDGMAT--RNAITWNAMLGAYIQHGAEEDGLKMYSAML 485
Query: 303 QKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGR 362
+ + P+ VT++++ C+ G + G V+ +L ++ I M + GR
Sbjct: 486 SQKDVTPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLIL-NVSVANAAITMYSKCGR 544
Query: 363 LEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEM-ERGYGGDYVLMY 421
+ +A+K + + DVV W ++ S HG MG++ + +M +G DY+
Sbjct: 545 ISEAQKLFDLLNGK--DVVSWNAMITGYSQHG---MGKQAAKTFDDMLSKGAKPDYISYV 599
Query: 422 NILAGVGRFG 431
+L+G G
Sbjct: 600 AVLSGCSHSG 609
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 84/349 (24%), Positives = 160/349 (45%), Gaps = 32/349 (9%)
Query: 81 IRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFD-EMPERN 139
+R+C + LH + VG S V++ L++ Y+S G L D+ +L ++ E N
Sbjct: 27 LRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYLSCGALSDARRLLRADIKEPN 86
Query: 140 LVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVA 199
++T N+M+ G K G L A LF+ MP R+V SW ++ +R S + +
Sbjct: 87 VITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSDTSRPAGSWMSCG----ALG 142
Query: 200 CEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVL-----------NC 248
C P + + W + DV++ L+ + + G+ F R+ N
Sbjct: 143 CRELAPQLLGLFWKFD-FWGDPDVETA-LVDMF-VRCGYVDFASRLFSQIERPTIFCRNS 199
Query: 249 LIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLK 308
++ YAK I A + FED++ +++VSW +I+ + G +EA+ M + G++
Sbjct: 200 MLAGYAKLYGIDHAIEYFEDMA--ERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGVR 257
Query: 309 PNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHY--GCLIDMLGRAGRLEQA 366
+ T+ S L AC+ + G K++ LP I Y LI++ + G ++A
Sbjct: 258 LDSTTYTSSLTACARLFSLGWGKQLHAKVIRS---LPQIDPYVASALIELYAKCGSFKEA 314
Query: 367 EKTALGIPSEITDVVVWRTLLGAC----SFHGNVEMGERVTRKILEMER 411
++ + + V W L+G F +VE+ ++ +++ +++
Sbjct: 315 KRVFNSLQDR--NSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQ 361
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 97/395 (24%), Positives = 163/395 (41%), Gaps = 69/395 (17%)
Query: 83 TCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVT 142
+C L L QL + K F V TALV+M+V G++ +S+LF ++ +
Sbjct: 137 SCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLFSQIERPTIFC 196
Query: 143 WNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALF----RKMV 198
N M+ G K ++ A FE+M R+VVSW +I ++ R EAL L RK V
Sbjct: 197 RNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGV 256
Query: 199 ACEYTE-PSEITILAVLPAIWQNGDVKSCQLIHGYGEK------RGFTAFDIRVLNCLID 251
+ T S +T A L ++ G+G++ R D V + LI+
Sbjct: 257 RLDSTTYTSSLTACARLFSL-------------GWGKQLHAKVIRSLPQIDPYVASALIE 303
Query: 252 TYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNR 311
YAKCG A ++F S++ +N VSWT +I G + ++VE F +M+ + ++
Sbjct: 304 LYAKCGSFKEAKRVFN--SLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQ 361
Query: 312 VTFLSVLNAC-----------SHGGLVEEGLN------------------------FFDK 336
++++ C H ++ G N F
Sbjct: 362 FALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSS 421
Query: 337 MVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNV 396
M E DI + +I + G + +A + G+ + + + W +LGA HG
Sbjct: 422 MSER-----DIVSWTSMITAYSQIGNIIKAREFFDGMATR--NAITWNAMLGAYIQHGAE 474
Query: 397 EMGERVTRKILEMERGYGGDYVLMYNILAGVGRFG 431
E G ++ +L ++ D+V + G G
Sbjct: 475 EDGLKMYSAMLS-QKDVTPDWVTYVTLFRGCADIG 508
>gi|225455746|ref|XP_002268440.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Vitis vinifera]
Length = 881
Score = 239 bits (611), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 143/421 (33%), Positives = 231/421 (54%), Gaps = 44/421 (10%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+N LL Y+ P+KA LY Q+ + S L P D FT L+ C+ + + G
Sbjct: 376 WNALLCGYAQNSDPRKALDLYLQM------TDSGLDP--DWFTIGSLLLACSRMKSLHYG 427
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
++H + G ++ +L+++Y+ G K F
Sbjct: 428 EEIHGFALRNGLAVDPFIGISLLSLYICCG------KPF--------------------- 460
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
A+ LF+ M R++VSW +I GY++ +EA+ LFR+M++ + +P EI I+ V
Sbjct: 461 ----AAQVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLS-DGIQPYEIAIMCV 515
Query: 214 LPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVER 273
A Q ++ + +H + K T DI V + +ID YAK GCI + ++F+ +
Sbjct: 516 CGACSQLSALRLGKELHCFALKAHLTE-DIFVSSSIIDMYAKGGCIGLSQRIFD--RLRE 572
Query: 274 KNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNF 333
K++ SW II+G+ +HG GKEA+E F +M ++GLKP+ TF +L ACSH GLVE+GL +
Sbjct: 573 KDVASWNVIIAGYGIHGRGKEALELFEKMLRLGLKPDDFTFTGILMACSHAGLVEDGLEY 632
Query: 334 FDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFH 393
F++M+ + P ++HY C++DMLGRAGR++ A + +P + D +W +LL +C H
Sbjct: 633 FNQMLNLHNIEPKLEHYTCVVDMLGRAGRIDDALRLIEEMPGD-PDSRIWSSLLSSCRIH 691
Query: 394 GNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSL 453
GN+ +GE+V K+LE+E +YVL+ N+ AG G++ D R+R M + K GCS
Sbjct: 692 GNLGLGEKVANKLLELEPEKPENYVLISNLFAGSGKWDDVRRVRGRMKDIGLQKDAGCSW 751
Query: 454 V 454
+
Sbjct: 752 I 752
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 84/294 (28%), Positives = 135/294 (45%), Gaps = 50/294 (17%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+N ++ Y+ E + A ++ +L I H P D+FT +I+ CA L LG
Sbjct: 68 WNAIVSAYTRNELFEDAMSIFSEL--ISVTEHKP-----DNFTLPCVIKACAGLLDLGLG 120
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
+H + +K+ S V+V AL+ MY G ++++ K+F
Sbjct: 121 QIIHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKVF--------------------- 159
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYT-EPSEITILA 212
E MP RN+VSW II G++ E+ FR+M+ E + P T++
Sbjct: 160 ----------EHMPERNLVSWNSIICGFSENGFLQESFNAFREMLVGEESFVPDVATLVT 209
Query: 213 VLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVE 272
VLP D++ +HG K G ++ V N LID Y+KC + A LF+ +
Sbjct: 210 VLPVCAGEEDIEKGMAVHGLAVKLGLNE-ELMVNNSLIDMYSKCRFLSEAQLLFD--KND 266
Query: 273 RKNLVSWTSIISGFAMHGMGKEAVENFGRMQKV-----GLKPNRVTFLSVLNAC 321
+KN+VSW S+I G+A ++ F +QK+ +K + T L+VL C
Sbjct: 267 KKNIVSWNSMIGGYARE---EDVCRTFYLLQKMQTEDAKMKADEFTILNVLPVC 317
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 129/270 (47%), Gaps = 38/270 (14%)
Query: 54 YKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNT 113
+ +++ S +P D T ++ CA G +H + K+G + VN
Sbjct: 187 FNAFREMLVGEESFVP---DVATLVTVLPVCAGEEDIEKGMAVHGLAVKLGLNEELMVNN 243
Query: 114 ALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVS 173
+L++MY FL ++ LFD+ ++N+V+WN MI G +AR EE CR
Sbjct: 244 SLIDMYSKCRFLSEAQLLFDKNDKKNIVSWNSMIGG--------YAR---EEDVCR---- 288
Query: 174 WTGIIDGYTRMNRSNEALALFRKMVACEYT-EPSEITILAVLPAIWQNGDVKSCQLIHGY 232
L +KM + + E TIL VLP + +++S + +HGY
Sbjct: 289 ----------------TFYLLQKMQTEDAKMKADEFTILNVLPVCLERSELQSLKELHGY 332
Query: 233 GEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMG 292
+ G + ++ V N I Y +CG + S+ ++F+ ++ K + SW +++ G+A +
Sbjct: 333 SWRHGLQSNEL-VANAFIAAYTRCGALCSSERVFD--LMDTKTVSSWNALLCGYAQNSDP 389
Query: 293 KEAVENFGRMQKVGLKPNRVTFLSVLNACS 322
++A++ + +M GL P+ T S+L ACS
Sbjct: 390 RKALDLYLQMTDSGLDPDWFTIGSLLLACS 419
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/313 (25%), Positives = 140/313 (44%), Gaps = 40/313 (12%)
Query: 80 LIRTCATLSHPNLGTQLHAVIS-KVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPER 138
L++ C +G +LH ++S F + +NT ++ MY G DS +FD++ +
Sbjct: 4 LLQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLRRK 63
Query: 139 NLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMV 198
NL W I+ YTR +A+++F +++
Sbjct: 64 NLF-------------------------------QWNAIVSAYTRNELFEDAMSIFSELI 92
Query: 199 ACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGC 258
+ +P T+ V+ A D+ Q+IHG K + D+ V N LI Y KCG
Sbjct: 93 SVTEHKPDNFTLPCVIKACAGLLDLGLGQIIHGMATKMDLVS-DVFVGNALIAMYGKCGL 151
Query: 259 IFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRM--QKVGLKPNRVTFLS 316
+ A K+FE + +NLVSW SII GF+ +G +E+ F M + P+ T ++
Sbjct: 152 VEEAVKVFEHMP--ERNLVSWNSIICGFSENGFLQESFNAFREMLVGEESFVPDVATLVT 209
Query: 317 VLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSE 376
VL C+ +E+G+ V + + ++ LIDM + L +A+ L ++
Sbjct: 210 VLPVCAGEEDIEKGMAVHGLAV-KLGLNEELMVNNSLIDMYSKCRFLSEAQ--LLFDKND 266
Query: 377 ITDVVVWRTLLGA 389
++V W +++G
Sbjct: 267 KKNIVSWNSMIGG 279
>gi|297741128|emb|CBI31859.3| unnamed protein product [Vitis vinifera]
Length = 514
Score = 239 bits (611), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 153/474 (32%), Positives = 247/474 (52%), Gaps = 64/474 (13%)
Query: 4 LQNSQTPNNITTQIHSHLLTTNSLLHHSQLF--NTLLHFYSLAES---PQKAF--LLYKQ 56
L + + I++ IH H L L S LF N L+H Y++ QK F +L +
Sbjct: 33 LTTNINASTISSSIHVHAL---KLGFESYLFVSNALIHMYAMCGQLGFAQKMFDGMLDRD 89
Query: 57 LQQIYT--------HSHSPLPPLFDSFTYS----------FLIRTCATLSHPNLGTQLHA 98
L T + + + LFD+ T + +I C+ L +
Sbjct: 90 LVSWNTLICGYSQYNKYKEVLRLFDAMTAANIKADAVTMVKIILACSHLGDWEFADSMVK 149
Query: 99 VISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEF 158
I + + VY+ L++MY LG L
Sbjct: 150 YIKENNLEIDVYLGNTLIDMYGRLG-------------------------------NLTA 178
Query: 159 ARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIW 218
AR LF+ MP R+V+SWT +I GY++ ++ ++A+ LF++M+A + +P ++T+ +VL A
Sbjct: 179 ARKLFDNMPKRDVISWTSMITGYSQASQFSDAVKLFQEMMAAK-VKPDKVTVASVLSACA 237
Query: 219 QNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVS 278
G + +H Y + G A DI V N LID Y KCG + A ++F ++ K+ VS
Sbjct: 238 HLGKLDVGWAVHHYIRRHGVQA-DIYVGNSLIDMYCKCGMVEKALEVFH--RMKDKDSVS 294
Query: 279 WTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMV 338
WTS+ISG A++G A++ F +M + G++P TF+ +L AC+H GLV +GL +F+ M
Sbjct: 295 WTSVISGLAVNGFANSALDLFSQMLREGVQPTHGTFVGILLACAHAGLVNKGLEYFESME 354
Query: 339 EECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEM 398
++P +KHYGC++D+L R+G +++A + +P + DVVVWR LL AC HGNV +
Sbjct: 355 SVHGLVPAMKHYGCVVDLLSRSGNIDKAYEFIKKMPI-VPDVVVWRILLSACKLHGNVVL 413
Query: 399 GERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCS 452
E T+++LE++ G+YVL+ N AGV R+ DA ++R +M++ + K G S
Sbjct: 414 AEIATKRLLELDPCDSGNYVLLSNTYAGVDRWDDAMKMRELMEDSDVQKPSGSS 467
>gi|32487551|emb|CAE03754.1| OSJNBa0013K16.3 [Oryza sativa Japonica Group]
Length = 865
Score = 239 bits (611), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 124/381 (32%), Positives = 209/381 (54%), Gaps = 4/381 (1%)
Query: 72 FDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKL 131
D F + LI C LG QLH++ K G + V+ +L+++Y G L+++ +
Sbjct: 369 IDQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFV 428
Query: 132 FDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEAL 191
F M ER++V+W MIT + G + AR F+ M RN ++W ++ Y + + L
Sbjct: 429 FSSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMATRNAITWNAMLGAYIQHGAEEDGL 488
Query: 192 ALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLID 251
++ M++ + P +T + + G K I G+ K G ++ V N I
Sbjct: 489 KMYSAMLSQKDVTPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLI-LNVSVANAAIT 547
Query: 252 TYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNR 311
Y+KCG I A KLF+ ++ K++VSW ++I+G++ HGMGK+A + F M G KP+
Sbjct: 548 MYSKCGRISEAQKLFDLLN--GKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDY 605
Query: 312 VTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTAL 371
+++++VL+ CSH GLV+EG +FD M + P ++H+ C++D+LGRAG L +A+
Sbjct: 606 ISYVAVLSGCSHSGLVQEGKLYFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLID 665
Query: 372 GIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFG 431
+P + T VW LL AC HGN E+ E + + E++ G Y+L+ I + G+
Sbjct: 666 KMPMKPT-AEVWGALLSACKIHGNDELAELAAKHVFELDSPDSGSYMLLAKIYSDAGKSD 724
Query: 432 DAERLRRVMDERNAFKVPGCS 452
D+ ++R++M ++ K PG S
Sbjct: 725 DSAQVRKLMRDKGIKKNPGYS 745
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 88/367 (23%), Positives = 160/367 (43%), Gaps = 42/367 (11%)
Query: 81 IRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFD-EMPERN 139
+R+C + LH + VG S V++ L++ Y+S G L D+ +L ++ E N
Sbjct: 11 LRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYLSCGALSDARRLLRADIKEPN 70
Query: 140 LVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVA 199
++T N+M+ G K G L A LF+ MP R+V SW ++ GY + R + L F M
Sbjct: 71 VITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETFVSMHR 130
Query: 200 CEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCI 259
+ P+ T V+ + G + + G K F D V L+D + +CG +
Sbjct: 131 SGDSLPNAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWG-DPDVETALVDMFVRCGYV 189
Query: 260 FSASKLFEDI-----------------------------SVERKNLVSWTSIISGFAMHG 290
AS+LF I + +++VSW +I+ + G
Sbjct: 190 DFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSG 249
Query: 291 MGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHY 350
+EA+ M + G++ + T+ S L AC+ + G K++ LP I Y
Sbjct: 250 RVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRS---LPQIDPY 306
Query: 351 --GCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGAC----SFHGNVEMGERVTR 404
LI++ + G ++A++ + + V W L+G F +VE+ ++
Sbjct: 307 VASALIELYAKCGSFKEAKRVFNSLQDR--NSVSWTVLIGGSLQYECFSKSVELFNQMRA 364
Query: 405 KILEMER 411
+++ +++
Sbjct: 365 ELMAIDQ 371
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 91/349 (26%), Positives = 158/349 (45%), Gaps = 29/349 (8%)
Query: 59 QIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNM 118
+ + H L ++FT+ ++++C L L QL + K F V TALV+M
Sbjct: 123 ETFVSMHRSGDSLPNAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDM 182
Query: 119 YVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGII 178
+V G++ +S+LF ++ + N M+ G K ++ A FE+M R+VVSW +I
Sbjct: 183 FVRCGYVDFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMI 242
Query: 179 DGYTRMNRSNEALALF----RKMVACEYTE-PSEITILAVLPAIWQNGDVKSCQLIHGYG 233
++ R EAL L RK V + T S +T A L ++ G+G
Sbjct: 243 AALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSL-------------GWG 289
Query: 234 EK------RGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFA 287
++ R D V + LI+ YAKCG A ++F S++ +N VSWT +I G
Sbjct: 290 KQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFN--SLQDRNSVSWTVLIGGSL 347
Query: 288 MHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDI 347
+ ++VE F +M+ + ++ ++++ C + + G ++ I
Sbjct: 348 QYECFSKSVELFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRA-I 406
Query: 348 KHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNV 396
LI + + G L+ AE + D+V W +++ A S GN+
Sbjct: 407 VVSNSLISLYAKCGDLQNAEFVFSSMSER--DIVSWTSMITAYSQIGNI 453
>gi|302764714|ref|XP_002965778.1| hypothetical protein SELMODRAFT_83991 [Selaginella moellendorffii]
gi|300166592|gb|EFJ33198.1| hypothetical protein SELMODRAFT_83991 [Selaginella moellendorffii]
Length = 440
Score = 239 bits (611), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 145/436 (33%), Positives = 222/436 (50%), Gaps = 24/436 (5%)
Query: 3 ILQNSQTPNNITTQIHSHLLTTNSLLHHS-QLFNTLLHFYSLAESPQKAFLLYKQLQQIY 61
+ Q ++PN + I T N L + +LF+ + P+K + + + +
Sbjct: 14 VFQGLKSPNVFSWNIIILAYTQNGHLQEARELFSRM---------PKKNVVTWNTMIAAF 64
Query: 62 THSHSPLPPL--FD-------SFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVN 112
HS L FD T ++ C L ++H+ I K+G++SH ++
Sbjct: 65 VHSGQSQEALDLFDEMGEEPSKITLIHALQACENLGALEKAQEIHSRIIKLGWESHTILS 124
Query: 113 TALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVV 172
TAL N++ G + + +F++MP R++V WN M+ + G +E A LF M RN
Sbjct: 125 TALFNVFAKHGIMLQARAIFEKMPHRDVVCWNSMVAAYARRGHIEEAMKLFLSMSVRNAS 184
Query: 173 SWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGY 232
SW II Y + S EA LF+ M E E ++IT LAVL A + +L+H
Sbjct: 185 SWNSIITAYVQSGHSKEAFGLFKAM-DLEGVEATKITFLAVLGACTGTNSLAHGKLVHTL 243
Query: 233 GEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMG 292
GF A DI LI YAKCG ++ +F IS N ++W S+++ +A +G G
Sbjct: 244 MVDAGF-AVDITAATALITMYAKCGAPEASKAVFLQIS--HHNCITWASLVAAYAHNGRG 300
Query: 293 KEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGC 352
K AV+ F M PN++ F++VL+ACSHGGL+E G +FF MV + + P +HY C
Sbjct: 301 KAAVDFFRLMCLEAFTPNQIAFVNVLHACSHGGLLECGTSFFQSMVGDYGLEPIFEHYAC 360
Query: 353 LIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERG 412
++D+LGR+GR + AE L +P E D + W LL AC H +V+ G R KI+E++
Sbjct: 361 MVDVLGRSGRTDIAENLILEMPFE-PDGLPWTVLLAACKIHHDVKRGARAAEKIVELDPK 419
Query: 413 YGGDYVLMYNILAGVG 428
Y L+ N +G G
Sbjct: 420 RCAAYTLLANAYSGSG 435
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 91/307 (29%), Positives = 140/307 (45%), Gaps = 39/307 (12%)
Query: 118 MYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGI 177
MY + G +++ +F + N+ +WN++I + G L+ AR LF MP +NVV+W +
Sbjct: 1 MYGACGQHQEALAVFQGLKSPNVFSWNIIILAYTQNGHLQEARELFSRMPKKNVVTWNTM 60
Query: 178 IDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRG 237
I + +S EAL LF +M EPS+IT++ L A G ++ Q IH K G
Sbjct: 61 IAAFVHSGQSQEALDLFDEM----GEEPSKITLIHALQACENLGALEKAQEIHSRIIKLG 116
Query: 238 -----------FTAF-------------------DIRVLNCLIDTYAKCGCIFSASKLFE 267
F F D+ N ++ YA+ G I A KLF
Sbjct: 117 WESHTILSTALFNVFAKHGIMLQARAIFEKMPHRDVVCWNSMVAAYARRGHIEEAMKLFL 176
Query: 268 DISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLV 327
+SV +N SW SII+ + G KEA F M G++ ++TFL+VL AC+ +
Sbjct: 177 SMSV--RNASSWNSIITAYVQSGHSKEAFGLFKAMDLEGVEATKITFLAVLGACTGTNSL 234
Query: 328 EEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLL 387
G MV+ + DI LI M + G E ++ L I + + W +L+
Sbjct: 235 AHGKLVHTLMVDAGFAV-DITAATALITMYAKCGAPEASKAVFLQISHH--NCITWASLV 291
Query: 388 GACSFHG 394
A + +G
Sbjct: 292 AAYAHNG 298
>gi|347954522|gb|AEP33761.1| organelle transcript processing 82, partial [Crucihimalaya
wallichii]
Length = 710
Score = 239 bits (610), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 139/422 (32%), Positives = 237/422 (56%), Gaps = 44/422 (10%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+N ++ Y+ + ++A L+K++ + + + P D T ++ CA + LG
Sbjct: 203 WNAMISGYAETGNNKEALELFKEMMK------TNVRP--DESTMVSVVSACAQSASIELG 254
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
Q+H+ I GF S++ + AL+++Y+ K
Sbjct: 255 RQVHSWIDDHGFGSNLKIVNALIDLYI-------------------------------KC 283
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
GE+E A LFE + ++V+SW +I GYT MN EAL LF++M+ + P+++T+L++
Sbjct: 284 GEVETACGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGES-PNDVTMLSI 342
Query: 214 LPAIWQNGDVKSCQLIHGYGEKR-GFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVE 272
LPA G ++ + IH Y KR A LID YAKCG I +A ++F+ S+
Sbjct: 343 LPACAHLGAIEIGRWIHVYINKRLKGVANASSHRTSLIDMYAKCGDIEAAQQVFD--SIL 400
Query: 273 RKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLN 332
++L SW ++I GFAMHG A + F RM+K ++P+ +TF+ +L+ACSH G+++ G +
Sbjct: 401 NRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNEIEPDDITFVGLLSACSHSGMLDLGRH 460
Query: 333 FFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSF 392
F M E+ ++ P ++HYGC+ID+LG +G ++AE+ + E D V+W +LL AC
Sbjct: 461 IFRSMKEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINTMEME-PDGVIWCSLLKACKM 519
Query: 393 HGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCS 452
+ NVE+GE + ++++E G YVL+ NI A GR+ + ++R +++++ KVPGCS
Sbjct: 520 YANVELGESYAQNLIKIEPKNPGSYVLLSNIYATAGRWNEVAKIRALLNDKGMKKVPGCS 579
Query: 453 LV 454
+
Sbjct: 580 SI 581
Score = 202 bits (513), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 138/460 (30%), Positives = 235/460 (51%), Gaps = 53/460 (11%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNL 92
++NT+ ++L+ P A LY + S LP + +T+ FL+++CA
Sbjct: 70 IWNTMFRGHALSSDPVSALYLY-----VCMISLGLLP---NCYTFPFLLKSCAKSKAFRE 121
Query: 93 GTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVK 152
G Q+H + K+G+ +YV+T+L++MYV G L+D+ K+FD+ R++V++ +ITG
Sbjct: 122 GQQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYAS 181
Query: 153 WGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILA 212
G + A+ +F+E+P ++VVSW +I GY + EAL LF++M+ P E T+++
Sbjct: 182 KGYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTN-VRPDESTMVS 240
Query: 213 VLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVE 272
V+ A Q+ ++ + +H + + GF + +++++N LID Y KCG + +A LFE +S
Sbjct: 241 VVSACAQSASIELGRQVHSWIDDHGFGS-NLKIVNALIDLYIKCGEVETACGLFEGLSY- 298
Query: 273 RKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGL- 331
K+++SW ++I G+ + KEA+ F M + G PN VT LS+L AC+H G +E G
Sbjct: 299 -KDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRW 357
Query: 332 --NFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEK--------------------- 368
+ +K ++ V H LIDM + G +E A++
Sbjct: 358 IHVYINKRLK--GVANASSHRTSLIDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFA 415
Query: 369 ------TALGIPSEI------TDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGG- 415
A I S + D + + LL ACS G +++G + R + E +
Sbjct: 416 MHGRANAAFDIFSRMRKNEIEPDDITFVGLLSACSHSGMLDLGRHIFRSMKEDYKITPKL 475
Query: 416 -DYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
Y M ++L G F +AE + M E V CSL+
Sbjct: 476 EHYGCMIDLLGHSGLFKEAEEMINTM-EMEPDGVIWCSLL 514
Score = 41.2 bits (95), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 67/145 (46%), Gaps = 5/145 (3%)
Query: 262 ASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNAC 321
A +FE +++ NL+ W ++ G A+ A+ + M +GL PN TF +L +C
Sbjct: 56 AISVFE--TIQEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSC 113
Query: 322 SHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVV 381
+ EG +++ L D+ + LI M + GRLE A K + S DVV
Sbjct: 114 AKSKAFREGQQIHGHVLKLGYDL-DLYVHTSLISMYVQNGRLEDARK--VFDQSSHRDVV 170
Query: 382 VWRTLLGACSFHGNVEMGERVTRKI 406
+ L+ + G + +++ +I
Sbjct: 171 SYTALITGYASKGYIASAQKMFDEI 195
>gi|356561853|ref|XP_003549191.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Glycine max]
Length = 748
Score = 239 bits (610), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 140/386 (36%), Positives = 214/386 (55%), Gaps = 9/386 (2%)
Query: 73 DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLF 132
D T S ++ L +G Q+H + K G S +V +A+++MY G +K+ S++F
Sbjct: 239 DGSTVSCVLPAVGCLEDVVVGAQVHGYVIKQGLGSDKFVVSAMLDMYGKCGCVKEMSRVF 298
Query: 133 DEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCR----NVVSWTGIIDGYTRMNRSN 188
DE+ E + + N +TGL + G ++ A +F + + NVV+WT II ++ +
Sbjct: 299 DEVEEMEIGSLNAFLTGLSRNGMVDTALEVFNKFKDQKMELNVVTWTSIIASCSQNGKDL 358
Query: 189 EALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNC 248
EAL LFR M A EP+ +TI +++PA + + IH + +RG D+ V +
Sbjct: 359 EALELFRDMQAYG-VEPNAVTIPSLIPACGNISALMHGKEIHCFSLRRGIFD-DVYVGSA 416
Query: 249 LIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLK 308
LID YAKCG I A + F+ +S NLVSW +++ G+AMHG KE +E F M + G K
Sbjct: 417 LIDMYAKCGRIQLARRCFDKMSA--LNLVSWNAVMKGYAMHGKAKETMEMFHMMLQSGQK 474
Query: 309 PNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEK 368
P+ VTF VL+AC+ GL EEG ++ M EE + P ++HY CL+ +L R G+LE+A
Sbjct: 475 PDLVTFTCVLSACAQNGLTEEGWRCYNSMSEEHGIEPKMEHYACLVTLLSRVGKLEEAYS 534
Query: 369 TALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVG 428
+P E D VW LL +C H N+ +GE K+ +E G+Y+L+ NI A G
Sbjct: 535 IIKEMPFE-PDACVWGALLSSCRVHNNLSLGEIAAEKLFFLEPTNPGNYILLSNIYASKG 593
Query: 429 RFGDAERLRRVMDERNAFKVPGCSLV 454
+ + R+R VM + K PG S +
Sbjct: 594 LWDEENRIREVMKSKGLRKNPGYSWI 619
Score = 171 bits (434), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 135/495 (27%), Positives = 224/495 (45%), Gaps = 71/495 (14%)
Query: 4 LQNSQTPNNITTQIHSHLLTTNSLLHHSQLFNTLLHFYSLAES--------------PQK 49
L +S + Q H+ +L N L +QL +LL FY+ A S P
Sbjct: 9 LSSSTASLSQARQAHALILRLN-LFSDTQLTTSLLSFYANALSLSTPQLSLTLSSHLPHP 67
Query: 50 AFLLYKQLQQIYTHSHS------------PLPPLFDSFTYSFLIRTCATLSHPNLGTQLH 97
+ L + SH PL + D+F I++CA+L + G QLH
Sbjct: 68 TLFSFSSLIHAFARSHHFPHVLTTFSHLHPLRLIPDAFLLPSAIKSCASLRALDPGQQLH 127
Query: 98 AVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELE 157
A + GF + V ++L +MY+ + D+ KLFD MP+R++V W+ MI G + G +E
Sbjct: 128 AFAAASGFLTDSIVASSLTHMYLKCDRILDARKLFDRMPDRDVVVWSAMIAGYSRLGLVE 187
Query: 158 FARSLFEEMPC----RNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
A+ LF EM N+VSW G++ G+ +EA+ +FR M+ + P T+ V
Sbjct: 188 EAKELFGEMRSGGVEPNLVSWNGMLAGFGNNGFYDEAVGMFRMMLVQGFW-PDGSTVSCV 246
Query: 214 LPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDIS--- 270
LPA+ DV +HGY K+G + D V++ ++D Y KCGC+ S++F+++
Sbjct: 247 LPAVGCLEDVVVGAQVHGYVIKQGLGS-DKFVVSAMLDMYGKCGCVKEMSRVFDEVEEME 305
Query: 271 ----------VERK--------------------NLVSWTSIISGFAMHGMGKEAVENFG 300
+ R N+V+WTSII+ + +G EA+E F
Sbjct: 306 IGSLNAFLTGLSRNGMVDTALEVFNKFKDQKMELNVVTWTSIIASCSQNGKDLEALELFR 365
Query: 301 RMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRA 360
MQ G++PN VT S++ AC + + G + + D+ LIDM +
Sbjct: 366 DMQAYGVEPNAVTIPSLIPACGNISALMHGKEIHCFSLRR-GIFDDVYVGSALIDMYAKC 424
Query: 361 GRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLM 420
GR++ A + + + ++V W ++ + HG + E + + ++ G D V
Sbjct: 425 GRIQLARRCFDKMSA--LNLVSWNAVMKGYAMHGKAK--ETMEMFHMMLQSGQKPDLVTF 480
Query: 421 YNILAGVGRFGDAER 435
+L+ + G E
Sbjct: 481 TCVLSACAQNGLTEE 495
>gi|255567371|ref|XP_002524665.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223536026|gb|EEF37684.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 2000
Score = 239 bits (610), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 137/379 (36%), Positives = 211/379 (55%), Gaps = 6/379 (1%)
Query: 77 YSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMP 136
+S ++ A++ G +H ++K+GF+ V+V+++L++MY G KD LFD +
Sbjct: 319 FSSILSALASVEALQAGMNIHGHVTKIGFEKDVFVSSSLIDMYCKCGETKDGRFLFDTIL 378
Query: 137 ERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRK 196
E+N+V+WN M+ G G +E A+ LF MP RN VSW+ II G+ + +E +F +
Sbjct: 379 EKNMVSWNAMVGGYSLNGHMEEAKYLFNIMPVRNNVSWSAIIAGHLDCEQFDEMFEVFNE 438
Query: 197 MVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKC 256
M+ P++ T ++L A + + +HG K G D V L D YAK
Sbjct: 439 MILLGEI-PNKSTFSSLLCACASTASLDKGKNLHGKIVKLGIQC-DTYVGTALTDMYAKS 496
Query: 257 GCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKV-GLKPNRVTFL 315
G I S+ K+F + +KN VSWT++I G A G+ +E++ F M+K + PN V FL
Sbjct: 497 GDIESSKKVFNRMP--KKNEVSWTAMIQGLAESGLAEESLTLFEEMEKTSSIAPNEVMFL 554
Query: 316 SVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPS 375
+VL ACSH GLV++GL +F+ M + P +H+ C++DML RAGRL +AE+ +P
Sbjct: 555 AVLFACSHSGLVDKGLWYFNSMEAVYGLKPKGRHFTCVVDMLSRAGRLFEAEEFIYSMPF 614
Query: 376 EITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAER 435
+ + W LL C + N E+ ERV K+ EM YVL+ NI A GR+ D +
Sbjct: 615 Q-PETNAWAALLSGCKTYKNEELAERVAGKLWEMAEKNCAGYVLLSNIYASAGRWRDVLK 673
Query: 436 LRRVMDERNAFKVPGCSLV 454
+R++M + K GCS V
Sbjct: 674 VRKLMKAKGLKKSGGCSWV 692
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 98/359 (27%), Positives = 178/359 (49%), Gaps = 44/359 (12%)
Query: 73 DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLF 132
+ T++ ++R CA L LG + +I K G++ + V+ +L+ + + +G + + ++F
Sbjct: 183 NKVTFTSVVRACANLGDFGLGMSVLGLIVKTGYEHDLAVSNSLITLCLRMGEIHLAREVF 242
Query: 133 DEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALA 192
D M E+++V+W ++ V+ EL AR +F+EMP RN VSW+ +I Y + E+L
Sbjct: 243 DRMEEKDVVSWTAILDLYVEMDELGEARRIFDEMPQRNEVSWSAMIARYCQSGYPEESLR 302
Query: 193 LFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDT 252
LF +M+ E +P+ ++L A+ +++ IHG+ K GF D+ V + LID
Sbjct: 303 LFCRMIQ-EGFKPNISCFSSILSALASVEALQAGMNIHGHVTKIGFEK-DVFVSSSLIDM 360
Query: 253 YAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEA----------------- 295
Y KCG LF+ ++ KN+VSW +++ G++++G +EA
Sbjct: 361 YCKCGETKDGRFLFD--TILEKNMVSWNAMVGGYSLNGHMEEAKYLFNIMPVRNNVSWSA 418
Query: 296 --------------VENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVE-- 339
E F M +G PN+ TF S+L AC+ +++G N K+V+
Sbjct: 419 IIAGHLDCEQFDEMFEVFNEMILLGEIPNKSTFSSLLCACASTASLDKGKNLHGKIVKLG 478
Query: 340 -ECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVE 397
+C+ L DM ++G +E ++K +P + + V W ++ + G E
Sbjct: 479 IQCDTYVGT----ALTDMYAKSGDIESSKKVFNRMPKK--NEVSWTAMIQGLAESGLAE 531
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 101/365 (27%), Positives = 165/365 (45%), Gaps = 65/365 (17%)
Query: 93 GTQLHAVISKVGFQSHVYVNTALVNMY-------------------------------VS 121
G+ LHA + K G S Y++ L+ MY V
Sbjct: 40 GSALHAHLFKTGISSEQYISIKLLIMYLNYRKSAEADQISKDFDGFDLVVHNCMISANVQ 99
Query: 122 LGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGY 181
G L ++ KLFDEMP+ N ++W +I+G +K+G + + FE P +NVVSWT I GY
Sbjct: 100 RGNLDEARKLFDEMPQTNEISWTALISGFMKYGRVRESMWYFERNPFQNVVSWTAAISGY 159
Query: 182 TRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAF 241
+ S EA+ LF K++ E +P+++T +V+ A GD + G K G+
Sbjct: 160 VQNGFSVEAMKLFIKLLESE-VKPNKVTFTSVVRACANLGDFGLGMSVLGLIVKTGY-EH 217
Query: 242 DIRVLNCLIDTYAKCGCIFSASKLFE--------------DISVE--------------- 272
D+ V N LI + G I A ++F+ D+ VE
Sbjct: 218 DLAVSNSLITLCLRMGEIHLAREVFDRMEEKDVVSWTAILDLYVEMDELGEARRIFDEMP 277
Query: 273 RKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLN 332
++N VSW+++I+ + G +E++ F RM + G KPN F S+L+A + ++ G+N
Sbjct: 278 QRNEVSWSAMIARYCQSGYPEESLRLFCRMIQEGFKPNISCFSSILSALASVEALQAGMN 337
Query: 333 FFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSF 392
V + D+ LIDM + G + I + ++V W ++G S
Sbjct: 338 IHGH-VTKIGFEKDVFVSSSLIDMYCKCGETKDGRFLFDTILEK--NMVSWNAMVGGYSL 394
Query: 393 HGNVE 397
+G++E
Sbjct: 395 NGHME 399
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 101/218 (46%), Gaps = 48/218 (22%)
Query: 76 TYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEM 135
T+S L+ CA+ + + G LH I K+G Q YV TAL +MY G ++ S K+F+ M
Sbjct: 450 TFSSLLCACASTASLDKGKNLHGKIVKLGIQCDTYVGTALTDMYAKSGDIESSKKVFNRM 509
Query: 136 PERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFR 195
P++N V+W MI GL + G E + +LFEEM + ++
Sbjct: 510 PKKNEVSWTAMIQGLAESGLAEESLTLFEEMEKTSSIA---------------------- 547
Query: 196 KMVACEYTEPSEITILAVLPAIWQNGDV-------KSCQLIHGYGEK-RGFTAFDIRVLN 247
P+E+ LAVL A +G V S + ++G K R FT
Sbjct: 548 ---------PNEVMFLAVLFACSHSGLVDKGLWYFNSMEAVYGLKPKGRHFT-------- 590
Query: 248 CLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISG 285
C++D ++ G +F A + + + + +W +++SG
Sbjct: 591 CVVDMLSRAGRLFEAEEFIYSMPFQPET-NAWAALLSG 627
>gi|218195439|gb|EEC77866.1| hypothetical protein OsI_17132 [Oryza sativa Indica Group]
Length = 865
Score = 239 bits (610), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 124/380 (32%), Positives = 209/380 (55%), Gaps = 4/380 (1%)
Query: 73 DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLF 132
D F + LI C LG QLH++ K G + V+ +L+++Y G L+++ +F
Sbjct: 370 DQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVF 429
Query: 133 DEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALA 192
M ER++V+W MIT + G + AR F+ M RN ++W ++ Y + + L
Sbjct: 430 SSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMDTRNAITWNAMLGAYIQHGAEEDGLK 489
Query: 193 LFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDT 252
++ M++ + P +T + + G K I G+ K G ++ V N I
Sbjct: 490 MYSAMLSQKDVTPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLI-LNVSVANAAITM 548
Query: 253 YAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRV 312
Y+KCG I A KLF+ ++ K++VSW ++I+G++ HGMGK+A + F M G KP+ +
Sbjct: 549 YSKCGRISEAQKLFDLLN--GKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYI 606
Query: 313 TFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALG 372
++++VL+ CSH GLV+EG +FD M + P ++H+ C++D+LGRAG L +A+
Sbjct: 607 SYVAVLSGCSHSGLVQEGKLYFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLIDK 666
Query: 373 IPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGD 432
+P + T VW LL AC HGN E+ E + + E++ G Y+L+ I + G+ D
Sbjct: 667 MPMKPT-AEVWGALLSACKIHGNDELAELAAKHVFELDSPDSGSYMLLAKIYSDAGKSDD 725
Query: 433 AERLRRVMDERNAFKVPGCS 452
+ ++R++M ++ K PG S
Sbjct: 726 SAQVRKLMRDKGIKKNPGYS 745
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 88/367 (23%), Positives = 159/367 (43%), Gaps = 42/367 (11%)
Query: 81 IRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFD-EMPERN 139
+R+C + LH + VG S V++ L++ Y S G L D+ +L ++ E N
Sbjct: 11 LRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYFSCGALSDARRLLRADIKEPN 70
Query: 140 LVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVA 199
++T N+M+ G K G L A LF+ MP R+V SW ++ GY + R + L F M
Sbjct: 71 VITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETFVSMHR 130
Query: 200 CEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCI 259
+ P+ T V+ + G + + G K F D V L+D + +CG +
Sbjct: 131 SGDSLPNAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWG-DPDVETALVDMFVRCGYV 189
Query: 260 FSASKLFEDI-----------------------------SVERKNLVSWTSIISGFAMHG 290
AS+LF I + +++VSW +I+ + G
Sbjct: 190 DFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSG 249
Query: 291 MGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHY 350
+EA+ M + G++ + T+ S L AC+ + G K++ LP I Y
Sbjct: 250 RVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRS---LPQIDPY 306
Query: 351 --GCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGAC----SFHGNVEMGERVTR 404
LI++ + G ++A++ + + V W L+G F +VE+ ++
Sbjct: 307 VASALIELYAKCGSFKEAKRVFNSLQDR--NSVSWTVLIGGSLQYECFSKSVELFNQMRA 364
Query: 405 KILEMER 411
+++ +++
Sbjct: 365 ELMAIDQ 371
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 91/349 (26%), Positives = 158/349 (45%), Gaps = 29/349 (8%)
Query: 59 QIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNM 118
+ + H L ++FT+ ++++C L L QL + K F V TALV+M
Sbjct: 123 ETFVSMHRSGDSLPNAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDM 182
Query: 119 YVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGII 178
+V G++ +S+LF ++ + N M+ G K ++ A FE+M R+VVSW +I
Sbjct: 183 FVRCGYVDFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMI 242
Query: 179 DGYTRMNRSNEALALF----RKMVACEYTE-PSEITILAVLPAIWQNGDVKSCQLIHGYG 233
++ R EAL L RK V + T S +T A L ++ G+G
Sbjct: 243 AALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSL-------------GWG 289
Query: 234 EK------RGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFA 287
++ R D V + LI+ YAKCG A ++F S++ +N VSWT +I G
Sbjct: 290 KQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFN--SLQDRNSVSWTVLIGGSL 347
Query: 288 MHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDI 347
+ ++VE F +M+ + ++ ++++ C + + G ++ I
Sbjct: 348 QYECFSKSVELFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRA-I 406
Query: 348 KHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNV 396
LI + + G L+ AE + D+V W +++ A S GN+
Sbjct: 407 VVSNSLISLYAKCGDLQNAEFVFSSMSER--DIVSWTSMITAYSQIGNI 453
>gi|357154895|ref|XP_003576937.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Brachypodium distachyon]
Length = 661
Score = 239 bits (610), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 131/363 (36%), Positives = 205/363 (56%), Gaps = 4/363 (1%)
Query: 92 LGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLV 151
G ++ ++ G V + AL++M+ G + ++FD M +++ +W M+
Sbjct: 261 FGRMVYRYVADGGVGRSVNLENALIDMFGKFGCAASAREVFDSMAVKDVYSWTTMVNAYA 320
Query: 152 KWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITIL 211
K G+LE A LF++MP RN VSW+ +I Y++ N+ EA+ LF+ M+ E EP ++
Sbjct: 321 KCGDLESAARLFDDMPRRNAVSWSCMIAAYSQANQPEEAVRLFKAMIE-EGVEPINAGLV 379
Query: 212 AVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISV 271
+VL A Q G + + I+ G + + N ID YAKCG +ASKLF +++
Sbjct: 380 SVLSACAQLGCLDLGRWIYDNYVISGKAVLTVNLGNAFIDVYAKCGDFDAASKLFAEMA- 438
Query: 272 ERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGL 331
+N+VSW S+I A+HG +E + F +++ + P+ +TFL +L+ACSH GLV EG
Sbjct: 439 -ERNVVSWNSMIMAHAVHGQSEEVLRLFEQLKGTCIVPDEITFLGLLSACSHSGLVSEGR 497
Query: 332 NFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACS 391
+F +M + P +HY C+ID+LG+ G LE+A + A G+P E TD W LL AC
Sbjct: 498 RYFKEMKLIYGIEPKSEHYACMIDLLGKIGLLEEAFEVAKGMPME-TDEAGWGALLNACR 556
Query: 392 FHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGC 451
+GNVE+GE K++++ G YVLM I A ++ + LR +M ER K PGC
Sbjct: 557 MYGNVEIGEFAADKLVQLNPLDSGIYVLMSQIYASKNKWDQVKILRVLMRERGVKKNPGC 616
Query: 452 SLV 454
S +
Sbjct: 617 SSI 619
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 105/402 (26%), Positives = 184/402 (45%), Gaps = 77/402 (19%)
Query: 30 HSQLFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSH 89
++ + T++ + A P +A L++++ + LP D+ T F I+ A+
Sbjct: 101 NAYMLATMMRAFLRARLPSRASALFRRVIR------ESLPA--DARTLVFAIKAAASEHE 152
Query: 90 ---PNLGTQLHAVISKVGFQSH-VYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNV 145
P+ G +H V K G + V V ALV+ Y + R+L
Sbjct: 153 HHSPSGGEGVHCVALKWGHVAQSVLVGNALVHFYAN---------------HRSLA---- 193
Query: 146 MITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEP 205
AR+LF+EMP R+VVSWT ++DGY R ++EA +F +MV +P
Sbjct: 194 ------------HARNLFDEMPDRDVVSWTTLVDGYARRGLADEAWRVFCRMVVAGGLQP 241
Query: 206 SEITILAVLPAIWQNGDVKSCQLIHGYGEKRG--------------FTAF---------- 241
+E+T++AV+ A+ Q G + ++++ Y G F F
Sbjct: 242 NEVTLVAVVSAMGQMGLLAFGRMVYRYVADGGVGRSVNLENALIDMFGKFGCAASAREVF 301
Query: 242 ------DIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEA 295
D+ +++ YAKCG + SA++LF+D+ R+N VSW+ +I+ ++ +EA
Sbjct: 302 DSMAVKDVYSWTTMVNAYAKCGDLESAARLFDDMP--RRNAVSWSCMIAAYSQANQPEEA 359
Query: 296 VENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLID 355
V F M + G++P +SVL+AC+ G ++ G +D V + + + ID
Sbjct: 360 VRLFKAMIEEGVEPINAGLVSVLSACAQLGCLDLGRWIYDNYVISGKAVLTVNLGNAFID 419
Query: 356 MLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVE 397
+ + G + A K + +VV W +++ A + HG E
Sbjct: 420 VYAKCGDFDAASKLFAEMAER--NVVSWNSMIMAHAVHGQSE 459
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 122/269 (45%), Gaps = 11/269 (4%)
Query: 177 IIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAI--WQNGDVKSCQLIHGYGE 234
++ + R + A ALFR+++ + + A+ A ++ + +H
Sbjct: 108 MMRAFLRARLPSRASALFRRVIRESLPADARTLVFAIKAAASEHEHHSPSGGEGVHCVAL 167
Query: 235 KRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKE 294
K G A + V N L+ YA + A LF+++ +++VSWT+++ G+A G+ E
Sbjct: 168 KWGHVAQSVLVGNALVHFYANHRSLAHARNLFDEMP--DRDVVSWTTLVDGYARRGLADE 225
Query: 295 AVENFGRMQKV-GLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCL 353
A F RM GL+PN VT ++V++A GL+ G + + V + V + L
Sbjct: 226 AWRVFCRMVVAGGLQPNEVTLVAVVSAMGQMGLLAFGRMVY-RYVADGGVGRSVNLENAL 284
Query: 354 IDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGY 413
IDM G+ G A + + + DV W T++ A + G++E R+ +M R
Sbjct: 285 IDMFGKFGCAASAREVFDSMA--VKDVYSWTTMVNAYAKCGDLESAARLFD---DMPRRN 339
Query: 414 GGDYVLMYNILAGVGRFGDAERLRRVMDE 442
+ M + + +A RL + M E
Sbjct: 340 AVSWSCMIAAYSQANQPEEAVRLFKAMIE 368
>gi|297737088|emb|CBI26289.3| unnamed protein product [Vitis vinifera]
Length = 668
Score = 239 bits (610), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 153/457 (33%), Positives = 239/457 (52%), Gaps = 50/457 (10%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQI-YTHSHSPLPPLFDSFTYSFLIRTCATLSHPN 91
+ N+L+ YS A ++A LLY ++ + T +H +T+ F++ C ++
Sbjct: 98 MLNSLIRGYSSAGLGREAILLYVRMLVLGVTPNH---------YTFPFVLSGCTKIAAFC 148
Query: 92 LGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTW-------- 143
G Q+H + K+G + V++ L++ Y G + K+F+ M ERN+V+W
Sbjct: 149 EGIQVHGSVVKMGLEEDVFIQNCLIHFYAECGHMDHGHKVFEGMSERNVVSWTSLICGYA 208
Query: 144 -----------------NVMITGLV----KWGELEFARSLFEEMPCRNVVSWTGIIDGYT 182
VM+ LV K G ++ A+ LF+E RN+V + I+ Y
Sbjct: 209 RGDRPKEAVSLFFEMLNKVMVNALVDMYMKCGAIDAAKRLFDECVDRNLVLYNTILSNYA 268
Query: 183 RMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDV---KSCQ--LIHGYGEKRG 237
R + EALA+ +M+ + P +T+L+ + A Q D+ K C +H Y EK G
Sbjct: 269 RQGLAREALAILDEMLQ-QGPRPDRVTMLSAISASAQLVDLFYGKVCHGYWVHTYIEKNG 327
Query: 238 FTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVE 297
D+R+ L+D +A+CG SA ++F ++ +++ +WT+ I AM G G+ A
Sbjct: 328 IPC-DMRLNTALVDMFARCGDPQSAMQVFNKMT--ERDVSAWTAAIGTMAMEGNGEGATG 384
Query: 298 NFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDML 357
F +M G+KP+ V F+ VL ACSHGG VE+GL+ F M E+ + P I+HYGC++D+L
Sbjct: 385 LFNQMLIQGVKPDVVLFVQVLTACSHGGQVEQGLHIFSLM-EDHGISPQIEHYGCMVDLL 443
Query: 358 GRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDY 417
GRAG L +A +P E D VVW +LL AC H NVEM +I E+ G +
Sbjct: 444 GRAGLLREAFDLIKSMPMEPND-VVWGSLLAACRVHKNVEMATYAAERINELAPQRAGVH 502
Query: 418 VLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
VL+ NI A G++ D R+R + E+ KVPG S V
Sbjct: 503 VLLSNIYASAGKWTDVARVRLNLREKGVRKVPGSSSV 539
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 60/126 (47%), Gaps = 3/126 (2%)
Query: 262 ASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNAC 321
A +LF++ L S+I G++ G+G+EA+ + RM +G+ PN TF VL+ C
Sbjct: 82 AFELFKEDVRSDDALFMLNSLIRGYSSAGLGREAILLYVRMLVLGVTPNHYTFPFVLSGC 141
Query: 322 SHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVV 381
+ EG+ +V + + D+ CLI G ++ K G+ +VV
Sbjct: 142 TKIAAFCEGIQVHGSVV-KMGLEEDVFIQNCLIHFYAECGHMDHGHKVFEGMSER--NVV 198
Query: 382 VWRTLL 387
W +L+
Sbjct: 199 SWTSLI 204
>gi|224079057|ref|XP_002305733.1| predicted protein [Populus trichocarpa]
gi|222848697|gb|EEE86244.1| predicted protein [Populus trichocarpa]
Length = 571
Score = 239 bits (610), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 130/382 (34%), Positives = 206/382 (53%), Gaps = 37/382 (9%)
Query: 73 DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLF 132
D FT + ++ CA G +H I + QS+++V AL++MY
Sbjct: 98 DIFTITTVLHACACNGSLENGKDVHNYIRENDMQSNIFVCNALMDMYA------------ 145
Query: 133 DEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALA 192
K G +E A S+F EMP ++++SW +I GY++ + NEAL+
Sbjct: 146 -------------------KCGSMEDANSVFLEMPVKDIISWNTMIGGYSKNSLPNEALS 186
Query: 193 LFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDT 252
LF MV +P T+ +LPA + + +HG+ + GF + D +V N L+D
Sbjct: 187 LFGDMVL--EMKPDGTTLACILPACASLASLDRGKEVHGHILRNGFFS-DQQVANALVDM 243
Query: 253 YAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRV 312
Y KCG A LF+ I K+L++WT +I+G+ MHG G A+ F M++ G++P+ V
Sbjct: 244 YVKCGVPVLARLLFDMIPT--KDLITWTVMIAGYGMHGFGNNAITTFNEMRQAGIEPDEV 301
Query: 313 TFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALG 372
+F+S+L ACSH GL++EG FF+ M +EC V P ++HY C++D+L R+G+L A K
Sbjct: 302 SFISILYACSHSGLLDEGWRFFNVMQDECNVKPKLEHYACIVDLLARSGKLAMAYKFIKS 361
Query: 373 IPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGD 432
+P E D +W LL C H +V++ E+V + E+E G YVL+ N A ++ +
Sbjct: 362 MPIE-PDATIWGALLSGCRIHHDVKLAEKVAEHVFELEPENTGYYVLLANTYAEAEKWEE 420
Query: 433 AERLRRVMDERNAFKVPGCSLV 454
++LR+ + R K PGCS +
Sbjct: 421 VKKLRQKIGRRGLKKNPGCSWI 442
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 74/251 (29%), Positives = 126/251 (50%), Gaps = 8/251 (3%)
Query: 144 NVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYT 203
N ++ K G L+ A +F+ M R VV+WT +I Y R S+EA+ LF +M E
Sbjct: 37 NTLLDMYAKCGVLDGAILVFDLMSVRTVVTWTSLIAAYAREGLSDEAIRLFHEMDR-EGV 95
Query: 204 EPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSAS 263
P TI VL A NG +++ + +H Y + + +I V N L+D YAKCG + A+
Sbjct: 96 SPDIFTITTVLHACACNGSLENGKDVHNYIRENDMQS-NIFVCNALMDMYAKCGSMEDAN 154
Query: 264 KLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSH 323
+F ++ V K+++SW ++I G++ + + EA+ FG M + +KP+ T +L AC+
Sbjct: 155 SVFLEMPV--KDIISWNTMIGGYSKNSLPNEALSLFGDMV-LEMKPDGTTLACILPACAS 211
Query: 324 GGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVW 383
++ G ++ D + L+DM + G A IP++ D++ W
Sbjct: 212 LASLDRGKEVHGHILRN-GFFSDQQVANALVDMYVKCGVPVLARLLFDMIPTK--DLITW 268
Query: 384 RTLLGACSFHG 394
++ HG
Sbjct: 269 TVMIAGYGMHG 279
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 99/182 (54%), Gaps = 6/182 (3%)
Query: 210 ILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDI 269
++++L A GDV + +HG G K + N L+D YAKCG + A +F+ +
Sbjct: 1 MVSILQACANCGDVSLGRAVHGSGVK-ACVHWKTTFCNTLLDMYAKCGVLDGAILVFDLM 59
Query: 270 SVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEE 329
SV + +V+WTS+I+ +A G+ EA+ F M + G+ P+ T +VL+AC+ G +E
Sbjct: 60 SV--RTVVTWTSLIAAYAREGLSDEAIRLFHEMDREGVSPDIFTITTVLHACACNGSLEN 117
Query: 330 GLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGA 389
G + + + E ++ +I L+DM + G +E A L +P + D++ W T++G
Sbjct: 118 GKDVHN-YIRENDMQSNIFVCNALMDMYAKCGSMEDANSVFLEMP--VKDIISWNTMIGG 174
Query: 390 CS 391
S
Sbjct: 175 YS 176
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 105/256 (41%), Gaps = 42/256 (16%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+NT++ YS P +A L+ + + P D T + ++ CA+L+ + G
Sbjct: 168 WNTMIGGYSKNSLPNEALSLFGDMVL-------EMKP--DGTTLACILPACASLASLDRG 218
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
++H I + GF S V ALV+MYV G + LFD +P ++L+TW VMI
Sbjct: 219 KEVHGHILRNGFFSDQQVANALVDMYVKCGVPVLARLLFDMIPTKDLITWTVMIA----- 273
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
GY N A+ F +M EP E++ +++
Sbjct: 274 --------------------------GYGMHGFGNNAITTFNEMRQAG-IEPDEVSFISI 306
Query: 214 LPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVER 273
L A +G + + + C++D A+ G + A K + + +E
Sbjct: 307 LYACSHSGLLDEGWRFFNVMQDECNVKPKLEHYACIVDLLARSGKLAMAYKFIKSMPIEP 366
Query: 274 KNLVSWTSIISGFAMH 289
+ W +++SG +H
Sbjct: 367 DATI-WGALLSGCRIH 381
>gi|224096249|ref|XP_002310592.1| predicted protein [Populus trichocarpa]
gi|222853495|gb|EEE91042.1| predicted protein [Populus trichocarpa]
Length = 747
Score = 239 bits (610), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 126/384 (32%), Positives = 220/384 (57%), Gaps = 6/384 (1%)
Query: 73 DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLF 132
D F+ + + CA L + G Q+H I + F + V AL++MY G ++ + ++
Sbjct: 239 DRFSLASALSACANLEKLSFGKQIHGYIVRTMFDASGAVGNALISMYAKSGGVEIARRII 298
Query: 133 DE--MPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEA 190
++ + + +++ + ++ G VK G++ AR +F + +VV+WT +I GY + +N+A
Sbjct: 299 EQSGISDLDVIAFTALLNGYVKLGDITPARQIFNSLKDPDVVAWTAMIVGYVQNGLNNDA 358
Query: 191 LALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLI 250
+ +F+ MV+ E P+ T+ A+L A + + IH + G A V N L
Sbjct: 359 IEVFKTMVS-EGPRPNSFTLAAMLSASSSVTSLNHGKQIHASAIRSG-EALSPSVGNALT 416
Query: 251 DTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPN 310
YAK G I A K+F ++ + ++ VSWTS+I A HG+G+EA+E F +M +G+KP+
Sbjct: 417 TMYAKAGSINGARKVF-NLLRQNRDTVSWTSMIMALAQHGLGEEAIELFEQMLTLGIKPD 475
Query: 311 RVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTA 370
+T++ VL+AC+HGGLVE+G ++FD M ++ P + HY C++D+ GRAG L++A K
Sbjct: 476 HITYVGVLSACTHGGLVEQGRSYFDLMKNVHKIDPTLSHYACMVDLFGRAGLLQEAYKFV 535
Query: 371 LGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRF 430
+P E DV+ W +LL +C + NV++ + ++L +E G Y + N+ + G++
Sbjct: 536 ENMPME-PDVIAWGSLLSSCKVYKNVDLAKVAAERLLLIEPNNSGAYSALANVYSSCGKW 594
Query: 431 GDAERLRRVMDERNAFKVPGCSLV 454
DA ++R++M R K G S V
Sbjct: 595 DDAAKIRKLMKARGVKKEQGLSWV 618
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 103/408 (25%), Positives = 183/408 (44%), Gaps = 41/408 (10%)
Query: 75 FTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDE 134
FT + ++ +CA +G ++H+ + K+G + V V +L+NMY G LK + +FD
Sbjct: 108 FTLTNVLASCAATGSRGIGKKVHSFVVKLGLHACVPVANSLLNMYAKTGDLKMAKVVFDR 167
Query: 135 MPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALF 194
M RN +WN MI+ + G ++ A + FE + R++VSW +I G + NEAL F
Sbjct: 168 MKLRNTSSWNAMISLHMNCGRVDLALAQFELLSERDIVSWNSMIAGCNQHGFDNEALQFF 227
Query: 195 RKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGY---------------------- 232
++ +P ++ + L A + + IHGY
Sbjct: 228 SSILKDTSLKPDRFSLASALSACANLEKLSFGKQIHGYIVRTMFDASGAVGNALISMYAK 287
Query: 233 ----------GEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSI 282
E+ G + D+ L++ Y K G I A ++F S++ ++V+WT++
Sbjct: 288 SGGVEIARRIIEQSGISDLDVIAFTALLNGYVKLGDITPARQIFN--SLKDPDVVAWTAM 345
Query: 283 ISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECE 342
I G+ +G+ +A+E F M G +PN T ++L+A S + G + E
Sbjct: 346 IVGYVQNGLNNDAIEVFKTMVSEGPRPNSFTLAAMLSASSSVTSLNHGKQIHASAIRSGE 405
Query: 343 VL-PDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGER 401
L P + + L M +AG + A K + + D V W +++ A + HG E
Sbjct: 406 ALSPSVGN--ALTTMYAKAGSINGARKV-FNLLRQNRDTVSWTSMIMALAQHGLGEEAIE 462
Query: 402 VTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMD-ERNAFKV 448
+ ++L + G D++ +L+ G E+ R D +N K+
Sbjct: 463 LFEQMLTL--GIKPDHITYVGVLSACTHGGLVEQGRSYFDLMKNVHKI 508
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 101/355 (28%), Positives = 168/355 (47%), Gaps = 27/355 (7%)
Query: 102 KVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARS 161
K+G VY+ L+N+Y GF D+ LF+EMP + +WN +++G K G+LE A
Sbjct: 3 KLGLTFSVYLMNNLMNLYAKTGFHLDAHDLFNEMPVKTTFSWNTILSGYAKQGKLEKAHQ 62
Query: 162 LFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNG 221
+F+ +P R+ VSWT II GY +M R +A+ +F MV + P++ T+ VL + G
Sbjct: 63 VFDLIPVRDSVSWTTIIVGYNQMGRFEDAIKIFVDMVK-DKVLPTQFTLTNVLASCAATG 121
Query: 222 DVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTS 281
+ +H + K G A + V N L++ YAK G + A +F+ + + +N SW +
Sbjct: 122 SRGIGKKVHSFVVKLGLHAC-VPVANSLLNMYAKTGDLKMAKVVFDRMKL--RNTSSWNA 178
Query: 282 IISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEEC 341
+IS G A+ F + + + V++ S++ C+ G E L FF ++++
Sbjct: 179 MISLHMNCGRVDLALAQFELLSERDI----VSWNSMIAGCNQHGFDNEALQFFSSILKDT 234
Query: 342 EVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEM--- 398
+ PD L L LE+ L +I +V RT+ A GN +
Sbjct: 235 SLKPD---RFSLASALSACANLEK-----LSFGKQIHGYIV-RTMFDASGAVGNALISMY 285
Query: 399 ----GERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVP 449
G + R+I+E D + +L G + GD R++ N+ K P
Sbjct: 286 AKSGGVEIARRIIEQSGISDLDVIAFTALLNGYVKLGDITPARQIF---NSLKDP 337
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 96/233 (41%), Gaps = 59/233 (25%)
Query: 64 SHSPLPPLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLG 123
S P P +SFT + ++ ++++ N G Q+HA + G V AL MY G
Sbjct: 367 SEGPRP---NSFTLAAMLSASSSVTSLNHGKQIHASAIRSGEALSPSVGNALTTMYAKAG 423
Query: 124 FLKDSSKLFDEMPE-RNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYT 182
+ + K+F+ + + R+ V+W MI L + G E A LFE+M +
Sbjct: 424 SINGARKVFNLLRQNRDTVSWTSMIMALAQHGLGEEAIELFEQMLTLGI----------- 472
Query: 183 RMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFD 242
+P IT + VL A C HG ++G + FD
Sbjct: 473 ---------------------KPDHITYVGVLSA---------CT--HGGLVEQGRSYFD 500
Query: 243 IRV-----------LNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIIS 284
+ C++D + + G + A K E++ +E ++++W S++S
Sbjct: 501 LMKNVHKIDPTLSHYACMVDLFGRAGLLQEAYKFVENMPME-PDVIAWGSLLS 552
>gi|115452665|ref|NP_001049933.1| Os03g0314400 [Oryza sativa Japonica Group]
gi|108707812|gb|ABF95607.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113548404|dbj|BAF11847.1| Os03g0314400 [Oryza sativa Japonica Group]
gi|125586044|gb|EAZ26708.1| hypothetical protein OsJ_10614 [Oryza sativa Japonica Group]
Length = 648
Score = 239 bits (610), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 131/376 (34%), Positives = 218/376 (57%), Gaps = 6/376 (1%)
Query: 80 LIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERN 139
++ CA L G H + + G S + V AL++MY S + + +LFD +
Sbjct: 272 VVAACARLEVTRNGEMCHGLAFRAGLGSRLNVQNALIHMYSSFLNVVAARRLFDSGQCLD 331
Query: 140 LVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVA 199
+WN MI G +K G ++ A+ LF MP ++ VSWT +I G + ++S+EAL +F M A
Sbjct: 332 QFSWNSMIAGYLKNGSVKDAKELFTVMPDKDNVSWTTMISGCVQNDQSSEALTIFNNMQA 391
Query: 200 CEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCI 259
+ +P E+T+++V+ A ++ + +H Y + +T + + LID Y KCGC+
Sbjct: 392 -QGIKPDEVTLVSVISACTNMSSLEQGKSMHEYIREHQYT-ITVILGTSLIDMYMKCGCL 449
Query: 260 FSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLK-PNRVTFLSVL 318
SA ++F+ ++E + W ++I G AM+G+ ++++ F M+ PN +TF VL
Sbjct: 450 ESALEVFD--TMEERGTPCWNAVIVGLAMNGLVMKSLDMFSEMESSSTATPNEITFTGVL 507
Query: 319 NACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEIT 378
+AC H GLVEEG +FF M + ++P+I+HYGC++D+LGRAG +++AE +P
Sbjct: 508 SACRHAGLVEEGQHFFKLMQHKYHIIPNIRHYGCMVDLLGRAGYVKEAENLIESMPMS-P 566
Query: 379 DVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRR 438
DV W LLG+C HG+ E+GERV RK++ ++ + G + ++ NI A G + + LR
Sbjct: 567 DVPAWGALLGSCWKHGDNEVGERVGRKLVNLDPHHDGFHTMLSNIYASEGMWQHVKDLRG 626
Query: 439 VMDERNAFKVPGCSLV 454
M + + K+PG S+V
Sbjct: 627 SMKQWHVPKIPGSSVV 642
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 116/472 (24%), Positives = 190/472 (40%), Gaps = 115/472 (24%)
Query: 73 DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLF 132
D +T++ L CAT G Q+H + GF ++Y+ AL++MY + G L D+ K+F
Sbjct: 102 DCYTHTILAAACATRRAIEEGRQVHCHAVRHGFGRNLYLANALMSMYSACGCLGDARKVF 161
Query: 133 DEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCR----------------------- 169
D P + V+WN ++ V+ +++ A +F MP R
Sbjct: 162 DAGPVWDAVSWNTILAAYVQAEDVDQAVGVFARMPERGAAAVSSMVSLFGRRGMVDEARK 221
Query: 170 --------NVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNG 221
+V +WT +I + R + EALALF M E E ++ V+ A +
Sbjct: 222 VFDVVERKDVFTWTAMISCFQRNGKFAEALALFSDMRG-EGWPVDEAVMVCVVAACARLE 280
Query: 222 DVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFED------------- 268
++ ++ HG + G + + V N LI Y+ + +A +LF+
Sbjct: 281 VTRNGEMCHGLAFRAGLGS-RLNVQNALIHMYSSFLNVVAARRLFDSGQCLDQFSWNSMI 339
Query: 269 ----------------ISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRV 312
+ K+ VSWT++ISG + EA+ F MQ G+KP+ V
Sbjct: 340 AGYLKNGSVKDAKELFTVMPDKDNVSWTTMISGCVQNDQSSEALTIFNNMQAQGIKPDEV 399
Query: 313 TFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQA------ 366
T +SV++AC++ +E+G + + + E + I LIDM + G LE A
Sbjct: 400 TLVSVISACTNMSSLEQGKSMHEYIREHQYTITVILGTS-LIDMYMKCGCLESALEVFDT 458
Query: 367 --------------------------------EKTALGIPSEITDVVVWRTLLGACSFHG 394
E ++ P+EIT + +L AC G
Sbjct: 459 MEERGTPCWNAVIVGLAMNGLVMKSLDMFSEMESSSTATPNEIT----FTGVLSACRHAG 514
Query: 395 NVEMGERVTR------KILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVM 440
VE G+ + I+ R YG M ++L G +AE L M
Sbjct: 515 LVEEGQHFFKLMQHKYHIIPNIRHYG----CMVDLLGRAGYVKEAENLIESM 562
>gi|115441047|ref|NP_001044803.1| Os01g0848300 [Oryza sativa Japonica Group]
gi|15408890|dbj|BAB64281.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113534334|dbj|BAF06717.1| Os01g0848300 [Oryza sativa Japonica Group]
gi|125572632|gb|EAZ14147.1| hypothetical protein OsJ_04076 [Oryza sativa Japonica Group]
Length = 660
Score = 239 bits (610), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 141/391 (36%), Positives = 215/391 (54%), Gaps = 47/391 (12%)
Query: 73 DSFTYSFLIRTC--ATLSH---PNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKD 127
DS++Y+ ++ C A+ SH L ++HA + G+ H +V T L++ Y LG +
Sbjct: 179 DSYSYAHGLKACIAASTSHVPASALVREIHAHAVRRGYGLHTHVATTLIDCYAKLGIVS- 237
Query: 128 SSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRS 187
+A S+F MP RNVVSWT +I Y + R
Sbjct: 238 ------------------------------YAESVFATMPERNVVSWTAMIGCYAKNERP 267
Query: 188 NEALALFRKMVAC-EYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVL 246
+A+ LF++MVA E P+ +TI+ +L A + +L+H Y +RGF + + VL
Sbjct: 268 GDAILLFQEMVASDEDLVPNSVTIVCILHAFAGVNALGQGKLLHAYILRRGFDSL-VSVL 326
Query: 247 NCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVG 306
N L+ Y KCGC+ + +F D+ RK++VSW ++ISG+ MHG G EAV+ F M ++G
Sbjct: 327 NALMAMYMKCGCLEAGRHIF-DLIGHRKDVVSWNTLISGYGMHGFGHEAVQVFEDMTQMG 385
Query: 307 LKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQA 366
+ PN +TF+SVL ACSH GLV+EG F+ MV+ V P +HY C++D+LGRAG L++A
Sbjct: 386 VSPNIITFISVLGACSHAGLVDEGKRLFESMVDY-NVTPRAEHYACMVDLLGRAGHLDEA 444
Query: 367 EKTALGI---PSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNI 423
+ G+ PS VW +LLGAC H +VE E ++ ++E G+YVL+ +I
Sbjct: 445 VELIQGMHIRPSP----QVWGSLLGACRIHRHVEYAEMACSQLFDLEPRNAGNYVLLADI 500
Query: 424 LAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
A + L+ +++E KVPGCS +
Sbjct: 501 YARAKLHSEVGVLKDLLEEHALEKVPGCSWI 531
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 90/385 (23%), Positives = 160/385 (41%), Gaps = 72/385 (18%)
Query: 105 FQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFE 164
F+S +++T L++ Y SLG L + ++FDE P +++ WN ++ L E A +
Sbjct: 110 FRSDPFLSTRLIDAYASLGELPAARQVFDEAPVKSIFVWNALLKALALADHGEEALARLA 169
Query: 165 EMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVK 224
+M R+ ++ + + AC S + A++
Sbjct: 170 DM---------------GRLRVPVDSYSYAHGLKACIAASTSHVPASALV---------- 204
Query: 225 SCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIIS 284
+ IH + +RG+ V LID YAK G + A +F ++ +N+VSWT++I
Sbjct: 205 --REIHAHAVRRGY-GLHTHVATTLIDCYAKLGIVSYAESVFA--TMPERNVVSWTAMIG 259
Query: 285 GFAMHGMGKEAVENFGRM--QKVGLKPNRVTFLSVLNACS-----------HGGLVEEG- 330
+A + +A+ F M L PN VT + +L+A + H ++ G
Sbjct: 260 CYAKNERPGDAILLFQEMVASDEDLVPNSVTIVCILHAFAGVNALGQGKLLHAYILRRGF 319
Query: 331 ------LNFFDKMVEECEVL-------------PDIKHYGCLIDMLGRAGRLEQA----- 366
LN M +C L D+ + LI G G +A
Sbjct: 320 DSLVSVLNALMAMYMKCGCLEAGRHIFDLIGHRKDVVSWNTLISGYGMHGFGHEAVQVFE 379
Query: 367 EKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGD-YVLMYNILA 425
+ T +G+ I + + ++LGACS G V+ G+R+ +++ + Y M ++L
Sbjct: 380 DMTQMGVSPNI---ITFISVLGACSHAGLVDEGKRLFESMVDYNVTPRAEHYACMVDLLG 436
Query: 426 GVGRFGDAERLRRVMDERNAFKVPG 450
G +A L + M R + +V G
Sbjct: 437 RAGHLDEAVELIQGMHIRPSPQVWG 461
>gi|125543615|gb|EAY89754.1| hypothetical protein OsI_11297 [Oryza sativa Indica Group]
Length = 648
Score = 239 bits (610), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 131/376 (34%), Positives = 218/376 (57%), Gaps = 6/376 (1%)
Query: 80 LIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERN 139
++ CA L G H + + G S + V AL++MY S + + +LFD +
Sbjct: 272 VVAACARLEVTRNGEMCHGLAFRAGLGSRLNVQNALIHMYSSFLNVVAARRLFDSGQCLD 331
Query: 140 LVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVA 199
+WN MI G +K G ++ A+ LF MP ++ VSWT +I G + ++S+EAL +F M A
Sbjct: 332 QFSWNSMIAGYLKNGSVKDAKELFTVMPDKDNVSWTTMISGCVQNDQSSEALTIFNNMQA 391
Query: 200 CEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCI 259
+ +P E+T+++V+ A ++ + +H Y + +T + + LID Y KCGC+
Sbjct: 392 -QGIKPDEVTLVSVISACTNMSSLEQGKSMHEYIREHQYT-ITVILGTSLIDMYMKCGCL 449
Query: 260 FSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLK-PNRVTFLSVL 318
SA ++F+ ++E + W ++I G AM+G+ ++++ F M+ PN +TF VL
Sbjct: 450 ESALEVFD--TMEERGTPCWNAVIVGLAMNGLVMKSLDMFSEMESSSTATPNEITFTGVL 507
Query: 319 NACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEIT 378
+AC H GLVEEG +FF M + ++P+I+HYGC++D+LGRAG +++AE +P
Sbjct: 508 SACRHAGLVEEGQHFFKLMQHKYHIIPNIRHYGCMVDLLGRAGYVKEAENLIESMPMS-P 566
Query: 379 DVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRR 438
DV W LLG+C HG+ E+GERV RK++ ++ + G + ++ NI A G + + LR
Sbjct: 567 DVPAWGALLGSCWKHGDNEVGERVGRKLVNLDPHHDGFHTMLSNIYASEGMWQHVKDLRG 626
Query: 439 VMDERNAFKVPGCSLV 454
M + + K+PG S+V
Sbjct: 627 SMKQWHVPKIPGSSVV 642
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 116/472 (24%), Positives = 190/472 (40%), Gaps = 115/472 (24%)
Query: 73 DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLF 132
D +T++ L CAT G Q+H + GF ++Y+ AL++MY + G L D+ K+F
Sbjct: 102 DCYTHTILAAACATRRAIEEGRQVHCHAVRHGFGRNLYLANALMSMYSACGCLGDARKVF 161
Query: 133 DEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCR----------------------- 169
D P + V+WN ++ V+ +++ A +F MP R
Sbjct: 162 DAGPVWDAVSWNTILAAYVQAEDVDQAVGVFARMPERGAAAVSSMVSLFGRRGMVDEARK 221
Query: 170 --------NVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNG 221
+V +WT +I + R + EALALF M E E ++ V+ A +
Sbjct: 222 VFDGVERKDVFTWTAMISCFQRNGKFAEALALFSDMRG-EGWPVDEAVMVCVVAACARLE 280
Query: 222 DVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFED------------- 268
++ ++ HG + G + + V N LI Y+ + +A +LF+
Sbjct: 281 VTRNGEMCHGLAFRAGLGS-RLNVQNALIHMYSSFLNVVAARRLFDSGQCLDQFSWNSMI 339
Query: 269 ----------------ISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRV 312
+ K+ VSWT++ISG + EA+ F MQ G+KP+ V
Sbjct: 340 AGYLKNGSVKDAKELFTVMPDKDNVSWTTMISGCVQNDQSSEALTIFNNMQAQGIKPDEV 399
Query: 313 TFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQA------ 366
T +SV++AC++ +E+G + + + E + I LIDM + G LE A
Sbjct: 400 TLVSVISACTNMSSLEQGKSMHEYIREHQYTITVILGTS-LIDMYMKCGCLESALEVFDT 458
Query: 367 --------------------------------EKTALGIPSEITDVVVWRTLLGACSFHG 394
E ++ P+EIT + +L AC G
Sbjct: 459 MEERGTPCWNAVIVGLAMNGLVMKSLDMFSEMESSSTATPNEIT----FTGVLSACRHAG 514
Query: 395 NVEMGERVTR------KILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVM 440
VE G+ + I+ R YG M ++L G +AE L M
Sbjct: 515 LVEEGQHFFKLMQHKYHIIPNIRHYG----CMVDLLGRAGYVKEAENLIESM 562
>gi|357475445|ref|XP_003608008.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355509063|gb|AES90205.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1183
Score = 239 bits (610), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 131/382 (34%), Positives = 208/382 (54%), Gaps = 37/382 (9%)
Query: 73 DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLF 132
D +T + ++ CA S + G +H+ + K G S++ V AL+NMY
Sbjct: 671 DIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYA------------ 718
Query: 133 DEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALA 192
K G +E AR +F ++P +++VSW +I GY++ + NEAL
Sbjct: 719 -------------------KCGSVEEARLVFSKIPVKDIVSWNTMIGGYSQNSLPNEALE 759
Query: 193 LFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDT 252
LF M + +P +IT+ VLPA + + IHG+ +RG+ + D+ V L+D
Sbjct: 760 LFLDMQ--KQFKPDDITMACVLPACAGLAALDKGREIHGHILRRGYFS-DLHVACALVDM 816
Query: 253 YAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRV 312
YAKCG + A LF+ I +K+L+SWT +I+G+ MHG G EA+ F M+ G++P+
Sbjct: 817 YAKCGLLVLAQLLFDMIP--KKDLISWTVMIAGYGMHGFGNEAISTFNEMRIAGIEPDES 874
Query: 313 TFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALG 372
+F +LNACSH GL+ EG FF+ M EC V P ++HY C++D+L R G L +A K
Sbjct: 875 SFSVILNACSHSGLLNEGWKFFNSMRNECGVEPKLEHYACVVDLLARMGNLSKAYKFIES 934
Query: 373 IPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGD 432
+P + D +W LL C H +V++ E+V I E+E YV++ N+ A ++ +
Sbjct: 935 MPIK-PDTTIWGVLLSGCRIHHDVKLAEKVAEHIFELEPDNTRYYVVLANVYAEAEKWEE 993
Query: 433 AERLRRVMDERNAFKVPGCSLV 454
++LR+ M +R + PGCS +
Sbjct: 994 VKKLRKRMQKRGFKQNPGCSWI 1015
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 96/408 (23%), Positives = 196/408 (48%), Gaps = 51/408 (12%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNL 92
L+N L+ Y+ + +++ L+K++Q+ L + + +T++ +++ A L
Sbjct: 437 LWNLLMSEYAKIGNFRESVSLFKKMQK--------LGVVGNCYTFTCVLKCFAALGKVKE 488
Query: 93 GTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVK 152
++H + K+GF S+ V +L+ Y G ++ + LFDE+ E ++V+WN MI G V
Sbjct: 489 CKRVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCV- 547
Query: 153 WGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILA 212
++G+ S L +F +M+ E T+++
Sbjct: 548 -------------------------VNGF-----SGNGLEIFIQMLILG-VEVDLTTLVS 576
Query: 213 VLPAIWQN-GDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISV 271
VL A W N G++ + +HG+G K F+ ++ N L+D Y+KCG + A+++F + +
Sbjct: 577 VLVA-WANIGNLSLGRALHGFGVKACFSE-EVVFSNTLLDMYSKCGNLNGATEVF--VKM 632
Query: 272 ERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGL 331
+VSWTS I+ + G+ +A+ F MQ G++P+ T S+++AC+ +++G
Sbjct: 633 GDTTIVSWTSTIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLDKGR 692
Query: 332 NFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACS 391
+ +++ + ++ LI+M + G +E+A IP + D+V W T++G
Sbjct: 693 DVHSYVIKN-GMGSNLPVTNALINMYAKCGSVEEARLVFSKIP--VKDIVSWNTMIGG-- 747
Query: 392 FHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRV 439
+ + L+M++ + D + M +L ++ R +
Sbjct: 748 -YSQNSLPNEALELFLDMQKQFKPDDITMACVLPACAGLAALDKGREI 794
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 140/314 (44%), Gaps = 38/314 (12%)
Query: 76 TYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEM 135
+Y +++ CA G ++H+VI G + LV MYV+ G L K+FD++
Sbjct: 371 SYCSVLQLCAEKKSLEDGKRVHSVIISNGISIDEALGAKLVFMYVNCGDLVQGRKIFDKI 430
Query: 136 PERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFR 195
+ WN++++ K G + SLF++M VV
Sbjct: 431 MNDKVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVG---------------------- 468
Query: 196 KMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAK 255
+ T VL G VK C+ +HGY K GF + + V+N LI Y K
Sbjct: 469 ----------NCYTFTCVLKCFAALGKVKECKRVHGYVLKLGFGS-NTAVVNSLIAAYFK 517
Query: 256 CGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFL 315
G + SA LF+++S ++VSW S+I+G ++G +E F +M +G++ + T +
Sbjct: 518 FGGVESAHNLFDELS--EPDVVSWNSMINGCVVNGFSGNGLEIFIQMLILGVEVDLTTLV 575
Query: 316 SVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPS 375
SVL A ++ G + G V+ C ++ L+DM + G L A T + +
Sbjct: 576 SVLVAWANIGNLSLGRALHGFGVKAC-FSEEVVFSNTLLDMYSKCGNLNGA--TEVFVKM 632
Query: 376 EITDVVVWRTLLGA 389
T +V W + + A
Sbjct: 633 GDTTIVSWTSTIAA 646
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 125/283 (44%), Gaps = 20/283 (7%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+NT++ YS P +A L+ +Q+ + D T + ++ CA L+ + G
Sbjct: 741 WNTMIGGYSQNSLPNEALELFLDMQKQFKP---------DDITMACVLPACAGLAALDKG 791
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
++H I + G+ S ++V ALV+MY G L + LFD +P+++L++W VMI G
Sbjct: 792 REIHGHILRRGYFSDLHVACALVDMYAKCGLLVLAQLLFDMIPKKDLISWTVMIAGYGMH 851
Query: 154 GELEFARSLFEEMPCRNV----VSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEIT 209
G A S F EM + S++ I++ + NE F M EP
Sbjct: 852 GFGNEAISTFNEMRIAGIEPDESSFSVILNACSHSGLLNEGWKFFNSMRNECGVEPKLEH 911
Query: 210 ILAVLPAIWQNGDV-KSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFED 268
V+ + + G++ K+ + I K T + + + C I K A K+ E
Sbjct: 912 YACVVDLLARMGNLSKAYKFIESMPIKPDTTIWGVLLSGCRIHHDVKL-----AEKVAEH 966
Query: 269 I-SVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPN 310
I +E N + + + +A +E + RMQK G K N
Sbjct: 967 IFELEPDNTRYYVVLANVYAEAEKWEEVKKLRKRMQKRGFKQN 1009
>gi|147840590|emb|CAN72716.1| hypothetical protein VITISV_032470 [Vitis vinifera]
Length = 694
Score = 239 bits (609), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 146/439 (33%), Positives = 227/439 (51%), Gaps = 57/439 (12%)
Query: 30 HSQLF--NTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATL 87
H L+ NTL+ Y+ + +P ++ L++ ++ H P D FT+ FLI+ + L
Sbjct: 97 HPNLYTWNTLIRAYASSSNPHQSLLIFLRM----LHQSPDFP---DKFTFPFLIKAASEL 149
Query: 88 SHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMI 147
G H ++ KV S V++ +L++ Y
Sbjct: 150 EELFTGKAFHGMVIKVLLGSDVFILNSLIHFYA--------------------------- 182
Query: 148 TGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSE 207
K GEL +F P R+VVSW +I + + EAL LF++M + +P+
Sbjct: 183 ----KCGELGLGYRVFVNXPRRDVVSWNSMITAFVQGGCPEEALELFQEM-ETQNVKPNG 237
Query: 208 ITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFE 267
IT++ VL A + D + + +H Y E R + + N ++D Y KCG + A +LF+
Sbjct: 238 ITMVGVLSACAKKSDFEFGRWVHSYIE-RNRIXESLTLSNAMLDMYTKCGSVEDAKRLFD 296
Query: 268 DISVERKNLVSWTSIISGFA------------MHGMGKEAVENFGRMQKVGLKPNRVTFL 315
+ K++VSWT+++ G+A MHG GK+A+ F +MQ+ +KPN VTF
Sbjct: 297 KMP--EKDIVSWTTMLVGYAKIGEYDAAQGLAMHGHGKDAIALFSKMQEDKVKPNAVTFT 354
Query: 316 SVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPS 375
++L ACSH GLVEEG FF++M VLP +KHY C++D+LGRAG LE+A + +P
Sbjct: 355 NILCACSHVGLVEEGRTFFNQMELVYGVLPGVKHYACMVDILGRAGLLEEAVELIEKMPM 414
Query: 376 EITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAER 435
VW LLGAC+ H NV + E+ +++E+E G G YVL+ NI A G++
Sbjct: 415 APA-ASVWGALLGACTIHENVVLAEQACSQLIELEPGNHGAYVLLSNIYAKAGKWDRVSG 473
Query: 436 LRRVMDERNAFKVPGCSLV 454
LR++M + K PGCS +
Sbjct: 474 LRKLMRDVGLKKEPGCSSI 492
>gi|449475140|ref|XP_004154387.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
gi|449522468|ref|XP_004168248.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
Length = 574
Score = 239 bits (609), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 147/437 (33%), Positives = 233/437 (53%), Gaps = 45/437 (10%)
Query: 18 HSHLLTTNSLLHHSQLFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTY 77
++HLL + L+N ++ Y+ + A LY Q++ + +P D FT+
Sbjct: 54 NAHLLFDRISKRNLFLWNVMIRGYAWNGPYELAISLYYQMRD-----YGLVP---DKFTF 105
Query: 78 SFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPE 137
F+++ C+ LS G ++H + + G +S V+V AL++MY
Sbjct: 106 PFVLKACSALSAMEEGKKIHKDVIRSGLESDVFVGAALIDMYA----------------- 148
Query: 138 RNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKM 197
K G +E AR +F+++ R+VV W ++ Y++ + +E+LAL R M
Sbjct: 149 --------------KCGCVESARQVFDKIDERDVVCWNSMLATYSQNGQPDESLALCRVM 194
Query: 198 VACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCG 257
A +P+E T + + A NG + + +HGY + GF + D +V L+D YAK G
Sbjct: 195 -AFNGLKPTEGTFVISIAASADNGLLPQGKELHGYSWRHGFESND-KVKTALMDMYAKSG 252
Query: 258 CIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSV 317
+ A LFE +E K +VSW ++I+G+AMHG EA++ F M+ L P+ +TF+ V
Sbjct: 253 SVNVARSLFE--LLEEKRVVSWNAMITGYAMHGHANEALDLFKEMKGKVL-PDHITFVGV 309
Query: 318 LNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEI 377
L ACSHGGL+ EG F M+ + + P ++HY C+ID+LG GRLE+A K + + E
Sbjct: 310 LAACSHGGLLNEGKMHFRSMISDFNIWPTVQHYTCMIDLLGHCGRLEEAYKLIMEMRVE- 368
Query: 378 TDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLR 437
D VW LL +C HGNVEMGE K++E+E GG+YV++ N+ A G++ RLR
Sbjct: 369 PDAGVWGALLHSCKIHGNVEMGELALEKLVELEPDDGGNYVILSNMYAQAGKWDGVARLR 428
Query: 438 RVMDERNAFKVPGCSLV 454
+M + K CS +
Sbjct: 429 DLMMNKGLKKSIACSWI 445
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 95/355 (26%), Positives = 153/355 (43%), Gaps = 41/355 (11%)
Query: 77 YSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMP 136
Y+ L+++C G QLHA I +VG + + T LVN+Y L ++ LFD +
Sbjct: 4 YASLLQSCVVRKAIEPGKQLHARICQVGISFNPLLATKLVNLYCICNSLTNAHLLFDRIS 63
Query: 137 ERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRK 196
+RNL WNVMI G G E A SL+ +M +V
Sbjct: 64 KRNLFLWNVMIRGYAWNGPYELAISLYYQMRDYGLV------------------------ 99
Query: 197 MVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKC 256
P + T VL A ++ + IH + G + D+ V LID YAKC
Sbjct: 100 --------PDKFTFPFVLKACSALSAMEEGKKIHKDVIRSGLES-DVFVGAALIDMYAKC 150
Query: 257 GCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLS 316
GC+ SA ++F+ I + +++V W S+++ ++ +G E++ M GLKP TF+
Sbjct: 151 GCVESARQVFDKI--DERDVVCWNSMLATYSQNGQPDESLALCRVMAFNGLKPTEGTFVI 208
Query: 317 VLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSE 376
+ A + GL+ +G D K L+DM ++G + A +L E
Sbjct: 209 SIAASADNGLLPQGKELHGYSWRHGFESND-KVKTALMDMYAKSGSVNVAR--SLFELLE 265
Query: 377 ITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFG 431
VV W ++ + HG+ + + EM+ D++ +LA G
Sbjct: 266 EKRVVSWNAMITGYAMHGHANEALDLFK---EMKGKVLPDHITFVGVLAACSHGG 317
>gi|357116509|ref|XP_003560023.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Brachypodium distachyon]
Length = 804
Score = 239 bits (609), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 132/426 (30%), Positives = 236/426 (55%), Gaps = 17/426 (3%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNL 92
++N ++ Y + +AF L++++ +PP D FT++ L+ CA
Sbjct: 263 VWNAMISGYVQSGMCAEAFELFRRMVS------KRIPP--DEFTFTSLLSACANAGFFLH 314
Query: 93 GTQLHAVISKVGF----QSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMIT 148
G +H ++ ++ + VN ALV +Y G + ++K+FD M +++V+WN +++
Sbjct: 315 GKSVHGQFIRLQPDFVPEAALPVNNALVTLYSKSGKIAVATKIFDSMTLKDVVSWNTILS 374
Query: 149 GLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEI 208
G ++ G L+ A +F+EMP ++ +SW ++ GY + +AL LF +M + E +P +
Sbjct: 375 GYIESGCLDNAARIFKEMPYKSELSWMVMVSGYVHGGLAEDALKLFNQMRS-EDVKPCDY 433
Query: 209 TILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFED 268
T + A + G +K + +H + + GF A + N L+ YA+CG + A +F
Sbjct: 434 TYAGAVAACGELGALKHGKQLHAHLVQCGFEASN-SAGNALLTMYARCGAVKDARLVF-- 490
Query: 269 ISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVE 328
+ + + VSW ++IS HG G+EA+E F +M G+ P+R++FL++L AC+H GLV+
Sbjct: 491 LVMPNVDSVSWNAMISALGQHGHGREALELFDQMVAQGIYPDRISFLTILTACNHAGLVD 550
Query: 329 EGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLG 388
+G +F+ M + + P HY LID+LGRAGR+ +A +P E T +W +L
Sbjct: 551 DGFQYFESMERDFGISPGEDHYARLIDLLGRAGRIGEARDLIKTMPFEPTP-AIWEAILS 609
Query: 389 ACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKV 448
C +G++E+G ++ +M + G Y+L+ N + GR+ DA R+R++M +R K
Sbjct: 610 GCRINGDMELGAYAADQLFKMVPEHDGTYILLSNTYSAAGRWVDAARVRKLMRDRGVKKE 669
Query: 449 PGCSLV 454
PGCS +
Sbjct: 670 PGCSWI 675
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 106/405 (26%), Positives = 188/405 (46%), Gaps = 57/405 (14%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNL 92
L N ++ ++ A A +++ L S L P D ++++ L+ + +
Sbjct: 124 LHNAMISAFARASLAAPAVSVFRSLLA----SDDSLRP--DDYSFTSLLSAVGQMHDLAV 177
Query: 93 G--TQLHAVISKVGFQSHVYVNTALVNMYV---SLGFLKDSSKLFDEMPERNLVTWNVMI 147
TQLH + K+G + + V+ AL+ +Y+ + G +D+ K+ DEMPE++ +TW ++
Sbjct: 178 SHCTQLHCAVHKLGAGAVLSVSNALIALYMKCDAPGVTRDARKVLDEMPEKDELTWTTIV 237
Query: 148 TGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSE 207
G V+ G++ ARS FEE+ V W +I GY + EA LFR+MV+ + P E
Sbjct: 238 VGHVRKGDVHAARSAFEEIDGEFDVVWNAMISGYVQSGMCAEAFELFRRMVS-KRIPPDE 296
Query: 208 ITILAVLPAIWQNGDVKSCQLIHGYG---EKRGFTAFDIRVLNCLIDTYAKCGCIFSASK 264
T ++L A G + +HG + + V N L+ Y+K G I A+K
Sbjct: 297 FTFTSLLSACANAGFFLHGKSVHGQFIRLQPDFVPEAALPVNNALVTLYSKSGKIAVATK 356
Query: 265 LFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHG 324
+F+ +++ K++VSW +I+SG+ G ++N R+ K + ++++ +++ HG
Sbjct: 357 IFDSMTL--KDVVSWNTILSGYIESG----CLDNAARIFKEMPYKSELSWMVMVSGYVHG 410
Query: 325 GLVEEGLNFFDKM---------------VEECEVLPDIKH-------------------Y 350
GL E+ L F++M V C L +KH
Sbjct: 411 GLAEDALKLFNQMRSEDVKPCDYTYAGAVAACGELGALKHGKQLHAHLVQCGFEASNSAG 470
Query: 351 GCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGN 395
L+ M R G ++ A L +P+ D V W ++ A HG+
Sbjct: 471 NALLTMYARCGAVKDARLVFLVMPN--VDSVSWNAMISALGQHGH 513
>gi|449449306|ref|XP_004142406.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Cucumis sativus]
Length = 782
Score = 239 bits (609), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 139/423 (32%), Positives = 236/423 (55%), Gaps = 13/423 (3%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+N+++ YS +A +++ ++ + L P D+FT + ++ CA L N+G
Sbjct: 242 WNSMISGYSQQGYNLEALVIFSKML-----NEPSLKP--DNFTLASILSACANLEKLNIG 294
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNL--VTWNVMITGLV 151
Q+HA I + ++ V AL++MY G ++ + + + NL + + ++ G
Sbjct: 295 KQIHAYILRAETETSGAVGNALISMYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGYT 354
Query: 152 KWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITIL 211
K G ++ AR +F ++ R+VV+WT +I GY + N+AL LFR MV E EP+ T+
Sbjct: 355 KLGNVKPAREIFNKLRDRDVVAWTAMIVGYVQNGLWNDALELFRLMVN-EGPEPNSYTLA 413
Query: 212 AVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISV 271
A+L ++ + IH K G ++ V N LI YAK G I A ++F D+
Sbjct: 414 AMLSVSSSLTILEHGKQIHASAIKAGESSTP-SVTNALIAMYAKTGNINVAKRVF-DLPN 471
Query: 272 ERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGL 331
+K +VSWTS+I A HG+GKEA+ F RM VG+KP+ +T++ VL+AC+H GLVE+G
Sbjct: 472 GKKEIVSWTSMIMALAQHGLGKEAINLFERMLSVGMKPDHITYVGVLSACTHVGLVEQGR 531
Query: 332 NFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACS 391
+++ M E E+ P + HY C+ID+ GRAG L++A +P E D + W +LL +C
Sbjct: 532 KYYNMMTEVHEIEPTLSHYACMIDLYGRAGLLQEAYLFIESMPIE-PDNIAWGSLLASCK 590
Query: 392 FHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGC 451
H N ++ + ++L ++ G G Y+ + N+ + G++ +A + R++M +R K G
Sbjct: 591 IHKNADLAKVAAERLLLIDPGNSGAYLALANVYSACGKWENAAQTRKLMKDRGVRKEKGI 650
Query: 452 SLV 454
S +
Sbjct: 651 SWI 653
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 104/404 (25%), Positives = 190/404 (47%), Gaps = 42/404 (10%)
Query: 68 LPPLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKD 127
+PP FT S ++ +CA ++G ++H+ + K+G S V V T+L+NMY G
Sbjct: 138 VPP--SQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMYAKCGDPVI 195
Query: 128 SSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRS 187
+ +FD M +N+ TWN +I+ ++ G+ E A S FE+MP R++VSW +I GY++ +
Sbjct: 196 AKVVFDRMTVKNISTWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMISGYSQQGYN 255
Query: 188 NEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGY--------------- 232
EAL +F KM+ +P T+ ++L A + + IH Y
Sbjct: 256 LEALVIFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQIHAYILRAETETSGAVGNA 315
Query: 233 -----------------GEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKN 275
E + +I L+D Y K G + A ++F + ++
Sbjct: 316 LISMYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKL--RDRD 373
Query: 276 LVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFD 335
+V+WT++I G+ +G+ +A+E F M G +PN T ++L+ S ++E G
Sbjct: 374 VVAWTAMIVGYVQNGLWNDALELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEHGKQIHA 433
Query: 336 KMVEECE-VLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHG 394
++ E P + + LI M + G + A K +P+ ++V W +++ A + HG
Sbjct: 434 SAIKAGESSTPSVTN--ALIAMYAKTGNINVA-KRVFDLPNGKKEIVSWTSMIMALAQHG 490
Query: 395 NVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRR 438
+ + ++L + G D++ +L+ G E+ R+
Sbjct: 491 LGKEAINLFERMLSV--GMKPDHITYVGVLSACTHVGLVEQGRK 532
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 104/371 (28%), Positives = 177/371 (47%), Gaps = 20/371 (5%)
Query: 77 YSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMP 136
++ +++T + P G +H I K G VY+ L+ Y G L+ + +FDEMP
Sbjct: 13 FAHILQTSVRIKDPFAGRSVHCQIIKKGLHLGVYLMNNLMTFYAKTGSLRFAHHVFDEMP 72
Query: 137 ERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRK 196
++ +WN +I+G K G E +R L EMP + VSWT II GY + + A+ +F K
Sbjct: 73 LKSTFSWNTLISGYAKQGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFDNAIWMFAK 132
Query: 197 MVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKC 256
M++ E PS+ T+ VL + N + + IH + K G + + V L++ YAKC
Sbjct: 133 MIS-ERVPPSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLGSC-VPVATSLLNMYAKC 190
Query: 257 GCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNR--VTF 314
G A +F+ ++V KN+ +W ++IS + G + A F +M P+R V++
Sbjct: 191 GDPVIAKVVFDRMTV--KNISTWNALISLYMQSGQFELAASQFEKM------PDRDIVSW 242
Query: 315 LSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRL---EQAEKTAL 371
S+++ S G E L F KM+ E + PD ++ +L +Q L
Sbjct: 243 NSMISGYSQQGYNLEALVIFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQIHAYIL 302
Query: 372 GIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFG 431
+E T V L+ + G VE + R I+E R + + ++L G + G
Sbjct: 303 RAETE-TSGAVGNALISMYAKSGGVE----IARLIVEHNRTSNLNIIAFTSLLDGYTKLG 357
Query: 432 DAERLRRVMDE 442
+ + R + ++
Sbjct: 358 NVKPAREIFNK 368
>gi|413933352|gb|AFW67903.1| pentatricopeptide repeat protein PPR868-14 [Zea mays]
Length = 788
Score = 239 bits (609), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 134/376 (35%), Positives = 219/376 (58%), Gaps = 6/376 (1%)
Query: 77 YSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMP 136
+S ++ CATL GT++HA K+G ++++V+++L++MY + ++F+ +P
Sbjct: 382 FSSVLSACATLQDLRGGTRIHANALKMGSSTNLFVSSSLIDMYCKCKQCTYAQRVFNSLP 441
Query: 137 ERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRK 196
E+N V WN +I+G G++ A LF +MP RN VSW +I GY R +AL F
Sbjct: 442 EKNTVCWNSLISGYSWNGKMVEAEGLFNKMPARNSVSWNTMISGYAENRRFGDALNYFYA 501
Query: 197 MVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKC 256
M+A + P EIT+ +VL A ++ +++H K G +I + L D YAK
Sbjct: 502 MLASGHI-PGEITLSSVLLACANLCSLEMGRMVHAEIVKLGIED-NIFMGTALCDMYAKS 559
Query: 257 GCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLS 316
G + S+ ++F + KN ++WT+++ G A +G +E++ F M + G+ PN TFL+
Sbjct: 560 GDLDSSRRVF--YQMPEKNNITWTAMVQGLAENGFAEESISLFEDMIENGIAPNEHTFLA 617
Query: 317 VLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSE 376
+L ACSH GLVE+ +++F+ M + + P KHY C++D+L RAG L +AE+ + + SE
Sbjct: 618 ILFACSHCGLVEQAIHYFETM-QAHGIPPKSKHYTCMVDVLARAGCLPEAEELLMKVSSE 676
Query: 377 ITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERL 436
+ D W +LL ACS + N E+GER +K+ E+E+ YVL+ N+ A G++ DA
Sbjct: 677 L-DTSSWSSLLSACSTYRNKEIGERAAKKLHELEKDNTAGYVLLSNMYASCGKWKDAAET 735
Query: 437 RRVMDERNAFKVPGCS 452
R +M + K GCS
Sbjct: 736 RILMQGASLKKDAGCS 751
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 91/355 (25%), Positives = 166/355 (46%), Gaps = 21/355 (5%)
Query: 28 LHHSQLFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATL 87
LH F ++ + E + AF +++++ T S P + T +I+ C
Sbjct: 208 LHSVAFFTAMISGFVRNELHKDAFTVFRKM---LTCSVRP-----NVVTLICVIKACVGA 259
Query: 88 SHPNLGTQLHAVISKVG-FQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVM 146
+L + + K F+ + V+ +L+ +Y+ +G + ++FD+M R++V+W +
Sbjct: 260 GEFDLAMGVVGLAVKCNLFEKSIEVHNSLITLYLRMGDAAAARRVFDDMEVRDVVSWTAL 319
Query: 147 ITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPS 206
+ G+L+ AR + + MP RN VSW +I + + + EAL L+ +M+A + P+
Sbjct: 320 LDVYADLGDLDGARRVLDAMPARNEVSWGTLIARHEQKGDTAEALKLYSQMLA-DGCRPN 378
Query: 207 EITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLF 266
+VL A D++ IH K G ++ ++ V + LID Y KC A ++F
Sbjct: 379 ISCFSSVLSACATLQDLRGGTRIHANALKMG-SSTNLFVSSSLIDMYCKCKQCTYAQRVF 437
Query: 267 EDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGL 326
S+ KN V W S+ISG++ +G EA F +M N V++ ++++ +
Sbjct: 438 N--SLPEKNTVCWNSLISGYSWNGKMVEAEGLFNKMP----ARNSVSWNTMISGYAENRR 491
Query: 327 VEEGLNFFDKMVEECEVLPDIKHYGCLIDMLG----RAGRLEQAEKTALGIPSEI 377
+ LN+F M+ + +I L+ GR+ AE LGI I
Sbjct: 492 FGDALNYFYAMLASGHIPGEITLSSVLLACANLCSLEMGRMVHAEIVKLGIEDNI 546
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 87/348 (25%), Positives = 152/348 (43%), Gaps = 36/348 (10%)
Query: 115 LVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSW 174
+V+ +V G + + +LF MPE+++V++ M+ L+K G + A L+E P +V +
Sbjct: 155 MVSEHVKAGDIASARRLFYGMPEKSVVSYTTMVDALMKRGSVRDAVELYERCPLHSVAFF 214
Query: 175 TGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGE 234
T +I G+ R +A +FRKM+ C P+ +T++ V+ A G+ + G
Sbjct: 215 TAMISGFVRNELHKDAFTVFRKMLTCS-VRPNVVTLICVIKACVGAGEFDLAMGVVGLAV 273
Query: 235 KRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVE---------------------- 272
K I V N LI Y + G +A ++F+D+ V
Sbjct: 274 KCNLFEKSIEVHNSLITLYLRMGDAAAARRVFDDMEVRDVVSWTALLDVYADLGDLDGAR 333
Query: 273 -------RKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGG 325
+N VSW ++I+ G EA++ + +M G +PN F SVL+AC+
Sbjct: 334 RVLDAMPARNEVSWGTLIARHEQKGDTAEALKLYSQMLADGCRPNISCFSSVLSACATLQ 393
Query: 326 LVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRT 385
+ G ++ ++ LIDM + + A++ +P + T V W +
Sbjct: 394 DLRGGTRIHANALKMGSS-TNLFVSSSLIDMYCKCKQCTYAQRVFNSLPEKNT--VCWNS 450
Query: 386 LLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDA 433
L+ S++G + E + K M + M + A RFGDA
Sbjct: 451 LISGYSWNGKMVEAEGLFNK---MPARNSVSWNTMISGYAENRRFGDA 495
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 110/234 (47%), Gaps = 39/234 (16%)
Query: 75 FTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDE 134
T S ++ CA L +G +HA I K+G + ++++ TAL +MY G L S ++F +
Sbjct: 512 ITLSSVLLACANLCSLEMGRMVHAEIVKLGIEDNIFMGTALCDMYAKSGDLDSSRRVFYQ 571
Query: 135 MPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALF 194
MPE+N +TW M+ GL + G E + SLFE+M I +G
Sbjct: 572 MPEKNNITWTAMVQGLAENGFAEESISLFEDM----------IENGIA------------ 609
Query: 195 RKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGF-TAFDIRVLNCLIDTY 253
P+E T LA+L A G V+ Q IH + + + C++D
Sbjct: 610 ----------PNEHTFLAILFACSHCGLVE--QAIHYFETMQAHGIPPKSKHYTCMVDVL 657
Query: 254 AKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMH---GMGKEAVENFGRMQK 304
A+ GC+ A +L +S E + SW+S++S + + +G+ A + ++K
Sbjct: 658 ARAGCLPEAEELLMKVSSEL-DTSSWSSLLSACSTYRNKEIGERAAKKLHELEK 710
>gi|296086269|emb|CBI31710.3| unnamed protein product [Vitis vinifera]
Length = 649
Score = 239 bits (609), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 149/473 (31%), Positives = 243/473 (51%), Gaps = 48/473 (10%)
Query: 12 NITTQIHSHLLTTNSLLHHSQLFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPL 71
N QIH+ ++ + HHS L++ YSL A + ++ + +P L
Sbjct: 66 NPLLQIHAQIIVSGFKHHHS--ITHLINLYSLFHKCDLA-------RSVFDSTPNPSRIL 116
Query: 72 FDSFTYSFLIRTCATLSHPNLGTQLH-AVISKVGFQSHVYVNTALVNMYVSLGFLKDSSK 130
++S +IR N +++ ++ K G + V++ LV+MY +G LK + +
Sbjct: 117 WNS-----MIRAYTRSKQYNEALEMYYCMVEKGGLERDVFIGAGLVDMYSKMGDLKRARE 171
Query: 131 LFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEA 190
+FD+MP+R++V WN MI GL + + AR +F++M ++ VSW ++ GY E
Sbjct: 172 VFDKMPKRDVVAWNAMIAGLSQSEDPYVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEV 231
Query: 191 LALFRKM-----------------------------VACEYTEPSEITILAVLPAIWQNG 221
L LF KM + E P+ +T ++VLPA
Sbjct: 232 LELFDKMKLGNVTWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLA 291
Query: 222 DVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTS 281
+ H + GF + + V N LID YAKCG + + KLF ++ + K+ VSW +
Sbjct: 292 AFREGMAFHACIIQMGFLS-NTLVGNSLIDMYAKCGQLDYSEKLFNEM--DHKDTVSWNA 348
Query: 282 IISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEEC 341
++SG+A+HG G A+ F MQ+ ++ + V+F+SVL+AC H GLVEEG F M ++
Sbjct: 349 MLSGYAVHGHGDRAIALFSLMQESQVQIDSVSFVSVLSACRHAGLVEEGRKIFHSMSDKY 408
Query: 342 EVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGER 401
+ PD++HY C++D+LGRAG ++ +P E D VW LLG+C H NV++GE
Sbjct: 409 HIKPDLEHYACMVDLLGRAGLFDETLGFIKVMPVE-PDAGVWGALLGSCRMHSNVKLGEV 467
Query: 402 VTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
++++E +V++ +I A GR+ DA + R M++ K PGCS V
Sbjct: 468 ALDHLVKLEPRNPAHFVVLSSIYAQSGRWADAGKARSKMNDLGLKKTPGCSWV 520
>gi|449487256|ref|XP_004157540.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Cucumis sativus]
Length = 782
Score = 239 bits (609), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 133/384 (34%), Positives = 219/384 (57%), Gaps = 6/384 (1%)
Query: 73 DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLF 132
D+FT + ++ CA L N+G Q+HA I + ++ V AL++MY G ++ + +
Sbjct: 274 DNFTLASILSACANLEKLNIGKQIHAYILRAETETSGAVGNALISMYAKSGGVEIARLIV 333
Query: 133 DEMPERNL--VTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEA 190
+ NL + + ++ G K G ++ AR +F ++ R+VV+WT +I GY + N+A
Sbjct: 334 EHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRDRDVVAWTAMIVGYVQNGLWNDA 393
Query: 191 LALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLI 250
L LFR MV E EP+ T+ A+L ++ + IH K G ++ V N LI
Sbjct: 394 LELFRLMVN-EGPEPNSYTLAAMLSVSSSLTILEHGKQIHASAIKAGESSTP-SVTNALI 451
Query: 251 DTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPN 310
YAK G I A ++F D+ +K +VSWTS+I A HG+GKEA+ F RM VG+KP+
Sbjct: 452 AMYAKTGNINVAKRVF-DLPNGKKEIVSWTSMIMALAQHGLGKEAINLFERMLSVGMKPD 510
Query: 311 RVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTA 370
+T++ VL+AC+H GLVE+G +++ M E E+ P + HY C+ID+ GRAG L++A
Sbjct: 511 HITYVGVLSACTHVGLVEQGRKYYNMMTEVHEIEPTLSHYACMIDLYGRAGLLQEAYLFI 570
Query: 371 LGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRF 430
+P E D + W +LL +C H N ++ + ++L ++ G G Y+ + N+ + G++
Sbjct: 571 ESMPIE-PDNIAWGSLLASCKIHKNADLAKVAAERLLLIDPGNSGAYLALANVYSACGKW 629
Query: 431 GDAERLRRVMDERNAFKVPGCSLV 454
+A + R++M +R K G S +
Sbjct: 630 ENAAQTRKLMKDRGVRKEKGISWI 653
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 105/404 (25%), Positives = 191/404 (47%), Gaps = 42/404 (10%)
Query: 68 LPPLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKD 127
+PP FT S ++ +CA ++G ++H+ + K+G S V V T+L+NMY G
Sbjct: 138 VPP--SQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMYAKCGDPVI 195
Query: 128 SSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRS 187
+ +FD M +N+ TWN +I+ ++ G+ E A S FE+MP R++VSW +I GY++ +
Sbjct: 196 AKVVFDRMTVKNISTWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMISGYSQQGYN 255
Query: 188 NEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGY--------------- 232
EALA+F KM+ +P T+ ++L A + + IH Y
Sbjct: 256 LEALAIFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQIHAYILRAETETSGAVGNA 315
Query: 233 -----------------GEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKN 275
E + +I L+D Y K G + A ++F + ++
Sbjct: 316 LISMYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKL--RDRD 373
Query: 276 LVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFD 335
+V+WT++I G+ +G+ +A+E F M G +PN T ++L+ S ++E G
Sbjct: 374 VVAWTAMIVGYVQNGLWNDALELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEHGKQIHA 433
Query: 336 KMVEECE-VLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHG 394
++ E P + + LI M + G + A K +P+ ++V W +++ A + HG
Sbjct: 434 SAIKAGESSTPSVTN--ALIAMYAKTGNINVA-KRVFDLPNGKKEIVSWTSMIMALAQHG 490
Query: 395 NVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRR 438
+ + ++L + G D++ +L+ G E+ R+
Sbjct: 491 LGKEAINLFERMLSV--GMKPDHITYVGVLSACTHVGLVEQGRK 532
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 104/371 (28%), Positives = 177/371 (47%), Gaps = 20/371 (5%)
Query: 77 YSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMP 136
++ +++T + P G +H I K G VY+ L+ Y G L+ + +FDEMP
Sbjct: 13 FAHILQTSVRIKDPFAGRSVHCQIIKKGLHLGVYLMNNLMTFYAKTGSLRFAHHVFDEMP 72
Query: 137 ERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRK 196
++ +WN +I+G K G E +R L EMP + VSWT II GY + + A+ +F K
Sbjct: 73 LKSTFSWNTLISGYAKQGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFDNAIWMFAK 132
Query: 197 MVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKC 256
M++ E PS+ T+ VL + N + + IH + K G + + V L++ YAKC
Sbjct: 133 MIS-ERVPPSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLGSC-VPVATSLLNMYAKC 190
Query: 257 GCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNR--VTF 314
G A +F+ ++V KN+ +W ++IS + G + A F +M P+R V++
Sbjct: 191 GDPVIAKVVFDRMTV--KNISTWNALISLYMQSGQFELAASQFEKM------PDRDIVSW 242
Query: 315 LSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRL---EQAEKTAL 371
S+++ S G E L F KM+ E + PD ++ +L +Q L
Sbjct: 243 NSMISGYSQQGYNLEALAIFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQIHAYIL 302
Query: 372 GIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFG 431
+E T V L+ + G VE + R I+E R + + ++L G + G
Sbjct: 303 RAETE-TSGAVGNALISMYAKSGGVE----IARLIVEHNRTSNLNIIAFTSLLDGYTKLG 357
Query: 432 DAERLRRVMDE 442
+ + R + ++
Sbjct: 358 NVKPAREIFNK 368
>gi|225462250|ref|XP_002263297.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
[Vitis vinifera]
gi|297736133|emb|CBI24171.3| unnamed protein product [Vitis vinifera]
Length = 687
Score = 239 bits (609), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 137/386 (35%), Positives = 212/386 (54%), Gaps = 9/386 (2%)
Query: 73 DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLF 132
+S T S ++ C L G ++H + + G +V+V++ALVNMY S ++ + +F
Sbjct: 178 NSVTVSSILPACTDLKDLKSGREVHGFVVRNGMGGNVFVSSALVNMYASCLSIRQAQLVF 237
Query: 133 DEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCR----NVVSWTGIIDGYTRMNRSN 188
D M R+ V+WNV+IT E E S+F M N SW +I G + R+
Sbjct: 238 DSMSRRDTVSWNVLITAYFLNKECEKGLSVFGRMMSEGVGLNYASWNAVIGGCMQNGRTE 297
Query: 189 EALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNC 248
+AL + +M + +P++ITI +VLPA ++ + IHGY + F D+
Sbjct: 298 KALEVLSRMQNSGF-KPNQITITSVLPACTNLESLRGGKQIHGYIFRHWFFQ-DLTTTTA 355
Query: 249 LIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLK 308
L+ YAKCG + + ++F ++ +++ VSW ++I +MHG G+EA+ F M G++
Sbjct: 356 LVFMYAKCGDLELSRRVFSMMT--KRDTVSWNTMIIATSMHGNGEEALLLFREMVDSGVR 413
Query: 309 PNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEK 368
PN VTF VL+ CSH LV+EGL FD M + V PD H+ C++D+L RAGRLE+A +
Sbjct: 414 PNSVTFTGVLSGCSHSRLVDEGLLIFDSMSRDHSVEPDADHHSCMVDVLSRAGRLEEAYE 473
Query: 369 TALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVG 428
+P E T W LLG C + NVE+G ++ E+E G+YVL+ NIL
Sbjct: 474 FIKKMPIEPT-AGAWGALLGGCRVYKNVELGRIAANRLFEIESDNPGNYVLLSNILVSAK 532
Query: 429 RFGDAERLRRVMDERNAFKVPGCSLV 454
+ +A R++M +R K PGCS +
Sbjct: 533 LWSEASETRKLMRDRGVTKNPGCSWI 558
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 91/378 (24%), Positives = 154/378 (40%), Gaps = 71/378 (18%)
Query: 82 RTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLV 141
+ CA+L ++H + GF S V + AL++MY + + +F+ MP R+++
Sbjct: 86 KACASLRDVMNAKRVHEDAIRFGFCSDVLLGNALIDMYGKCRCSEGARLVFEGMPFRDVI 145
Query: 142 TWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACE 201
+W M + V G L EAL FRKM
Sbjct: 146 SWTSMASCYVNCGLLR-------------------------------EALGAFRKM-GLN 173
Query: 202 YTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFS 261
P+ +T+ ++LPA D+KS + +HG+ + G ++ V + L++ YA C I
Sbjct: 174 GERPNSVTVSSILPACTDLKDLKSGREVHGFVVRNGMGG-NVFVSSALVNMYASCLSIRQ 232
Query: 262 ASKLFEDISVERK---------------------------------NLVSWTSIISGFAM 288
A +F+ +S N SW ++I G
Sbjct: 233 AQLVFDSMSRRDTVSWNVLITAYFLNKECEKGLSVFGRMMSEGVGLNYASWNAVIGGCMQ 292
Query: 289 HGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIK 348
+G ++A+E RMQ G KPN++T SVL AC++ + G + D+
Sbjct: 293 NGRTEKALEVLSRMQNSGFKPNQITITSVLPACTNLESLRGGKQIHGYIFRHW-FFQDLT 351
Query: 349 HYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILE 408
L+ M + G LE + + + D V W T++ A S HGN E + R+++
Sbjct: 352 TTTALVFMYAKCGDLELSRRVFSMMTKR--DTVSWNTMIIATSMHGNGEEALLLFREMV- 408
Query: 409 MERGYGGDYVLMYNILAG 426
+ G + V +L+G
Sbjct: 409 -DSGVRPNSVTFTGVLSG 425
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 137/298 (45%), Gaps = 30/298 (10%)
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
G+L+ AR LF+++P ++ +WT +I T+ RS EA+ + EP ++ +L+V
Sbjct: 25 GDLQRARHLFDKIPQPDLPTWTILISALTKHGRSLEAIQYYNDFRHKNCVEPDKLLLLSV 84
Query: 214 LPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVER 273
A DV + + +H + GF + D+ + N LID Y KC C A +FE +
Sbjct: 85 AKACASLRDVMNAKRVHEDAIRFGFCS-DVLLGNALIDMYGKCRCSEGARLVFEGMPF-- 141
Query: 274 KNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACS----------- 322
++++SWTS+ S + G+ +EA+ F +M G +PN VT S+L AC+
Sbjct: 142 RDVISWTSMASCYVNCGLLREALGAFRKMGLNGERPNSVTVSSILPACTDLKDLKSGREV 201
Query: 323 HGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVV 382
HG +V G+ ++ L++M + QA+ + D V
Sbjct: 202 HGFVVRNGMG------------GNVFVSSALVNMYASCLSIRQAQLVFDSMSRR--DTVS 247
Query: 383 WRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVM 440
W L+ A + E G V ++ M G G +Y ++ G + G E+ V+
Sbjct: 248 WNVLITAYFLNKECEKGLSVFGRM--MSEGVGLNYASWNAVIGGCMQNGRTEKALEVL 303
>gi|195647336|gb|ACG43136.1| pentatricopeptide repeat protein PPR868-14 [Zea mays]
Length = 788
Score = 239 bits (609), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 134/376 (35%), Positives = 219/376 (58%), Gaps = 6/376 (1%)
Query: 77 YSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMP 136
+S ++ CATL GT++HA K+G ++++V+++L++MY + ++F+ +P
Sbjct: 382 FSSVLSACATLQDLRGGTRIHANALKMGSSTNLFVSSSLIDMYCKCKQCTYAQRVFNSLP 441
Query: 137 ERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRK 196
E+N V WN +I+G G++ A LF +MP RN VSW +I GY R +AL F
Sbjct: 442 EKNTVCWNSLISGYSWNGKMVEAEGLFNKMPARNSVSWNTMISGYAENRRFGDALNYFYA 501
Query: 197 MVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKC 256
M+A + P EIT+ +VL A ++ +++H K G +I + L D YAK
Sbjct: 502 MLASGHI-PGEITLSSVLLACANLCSLEMGRMVHAEIVKLGIED-NIFMGTALSDMYAKS 559
Query: 257 GCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLS 316
G + S+ ++F + KN ++WT+++ G A +G +E++ F M + G+ PN TFL+
Sbjct: 560 GDLDSSRRVF--YQMPEKNNITWTAMVQGLAENGFAEESISLFEDMIENGIAPNEHTFLA 617
Query: 317 VLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSE 376
+L ACSH GLVE+ +++F+ M + + P KHY C++D+L RAG L +AE+ + + SE
Sbjct: 618 ILFACSHCGLVEQAIHYFETM-QAHGIPPKSKHYTCMVDVLARAGCLPEAEELLMKVSSE 676
Query: 377 ITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERL 436
+ D W +LL ACS + N E+GER +K+ E+E+ YVL+ N+ A G++ DA
Sbjct: 677 L-DTSSWSSLLSACSTYRNKEIGERAAKKLHELEKDNTAGYVLLSNMYASCGKWKDAAET 735
Query: 437 RRVMDERNAFKVPGCS 452
R +M + K GCS
Sbjct: 736 RILMQGASLKKDAGCS 751
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 91/355 (25%), Positives = 165/355 (46%), Gaps = 21/355 (5%)
Query: 28 LHHSQLFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATL 87
LH F ++ + E + AF +++++ T S P + T +I+ C
Sbjct: 208 LHSVAFFTAMISGFVRNELHKDAFPVFRKM---LTCSVRP-----NVVTLICVIKACVGA 259
Query: 88 SHPNLGTQLHAVISKVG-FQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVM 146
+L + + K F+ + V+ +L+ +Y+ +G + ++FD+M R++V+W +
Sbjct: 260 GEFDLAMGVVGLAVKCNLFEKSIEVHNSLITLYLRMGDAAAAHRVFDDMEVRDVVSWTAL 319
Query: 147 ITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPS 206
+ G+L AR + + MP RN VSW +I + + + EAL L+ +M+A + P+
Sbjct: 320 LDVYADLGDLYGARRVLDAMPARNEVSWGTLIARHEQKGDTAEALKLYSQMLA-DGCRPN 378
Query: 207 EITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLF 266
+VL A D++ IH K G ++ ++ V + LID Y KC A ++F
Sbjct: 379 ISCFSSVLSACATLQDLRGGTRIHANALKMG-SSTNLFVSSSLIDMYCKCKQCTYAQRVF 437
Query: 267 EDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGL 326
S+ KN V W S+ISG++ +G EA F +M N V++ ++++ +
Sbjct: 438 N--SLPEKNTVCWNSLISGYSWNGKMVEAEGLFNKMP----ARNSVSWNTMISGYAENRR 491
Query: 327 VEEGLNFFDKMVEECEVLPDIKHYGCLIDMLG----RAGRLEQAEKTALGIPSEI 377
+ LN+F M+ + +I L+ GR+ AE LGI I
Sbjct: 492 FGDALNYFYAMLASGHIPGEITLSSVLLACANLCSLEMGRMVHAEIVKLGIEDNI 546
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 87/348 (25%), Positives = 152/348 (43%), Gaps = 36/348 (10%)
Query: 115 LVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSW 174
+V+ +V G + + +LF MPE+++V++ M+ L+K G + A L+E P +V +
Sbjct: 155 MVSEHVKAGDIASARRLFYGMPEKSVVSYTTMVDALMKRGSVRDAVELYERCPLHSVAFF 214
Query: 175 TGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGE 234
T +I G+ R +A +FRKM+ C P+ +T++ V+ A G+ + G
Sbjct: 215 TAMISGFVRNELHKDAFPVFRKMLTCS-VRPNVVTLICVIKACVGAGEFDLAMGVVGLAV 273
Query: 235 KRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVE---------------------- 272
K I V N LI Y + G +A ++F+D+ V
Sbjct: 274 KCNLFEKSIEVHNSLITLYLRMGDAAAAHRVFDDMEVRDVVSWTALLDVYADLGDLYGAR 333
Query: 273 -------RKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGG 325
+N VSW ++I+ G EA++ + +M G +PN F SVL+AC+
Sbjct: 334 RVLDAMPARNEVSWGTLIARHEQKGDTAEALKLYSQMLADGCRPNISCFSSVLSACATLQ 393
Query: 326 LVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRT 385
+ G ++ ++ LIDM + + A++ +P + T V W +
Sbjct: 394 DLRGGTRIHANALKMGSS-TNLFVSSSLIDMYCKCKQCTYAQRVFNSLPEKNT--VCWNS 450
Query: 386 LLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDA 433
L+ S++G + E + K M + M + A RFGDA
Sbjct: 451 LISGYSWNGKMVEAEGLFNK---MPARNSVSWNTMISGYAENRRFGDA 495
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 110/234 (47%), Gaps = 39/234 (16%)
Query: 75 FTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDE 134
T S ++ CA L +G +HA I K+G + ++++ TAL +MY G L S ++F +
Sbjct: 512 ITLSSVLLACANLCSLEMGRMVHAEIVKLGIEDNIFMGTALSDMYAKSGDLDSSRRVFYQ 571
Query: 135 MPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALF 194
MPE+N +TW M+ GL + G E + SLFE+M I +G
Sbjct: 572 MPEKNNITWTAMVQGLAENGFAEESISLFEDM----------IENGIA------------ 609
Query: 195 RKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGF-TAFDIRVLNCLIDTY 253
P+E T LA+L A G V+ Q IH + + + C++D
Sbjct: 610 ----------PNEHTFLAILFACSHCGLVE--QAIHYFETMQAHGIPPKSKHYTCMVDVL 657
Query: 254 AKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMH---GMGKEAVENFGRMQK 304
A+ GC+ A +L +S E + SW+S++S + + +G+ A + ++K
Sbjct: 658 ARAGCLPEAEELLMKVSSEL-DTSSWSSLLSACSTYRNKEIGERAAKKLHELEK 710
>gi|115468780|ref|NP_001057989.1| Os06g0597500 [Oryza sativa Japonica Group]
gi|50725579|dbj|BAD33047.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
gi|113596029|dbj|BAF19903.1| Os06g0597500 [Oryza sativa Japonica Group]
gi|125597760|gb|EAZ37540.1| hypothetical protein OsJ_21869 [Oryza sativa Japonica Group]
Length = 530
Score = 239 bits (609), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 140/424 (33%), Positives = 227/424 (53%), Gaps = 21/424 (4%)
Query: 45 ESPQKAFLLYKQLQQIYTH--------------SHSPLPPLFDSFTYSFLIRTCATLSHP 90
E P +A +L+ + + Y S + P D T + C+
Sbjct: 109 EMPSRALVLWNMMVRCYIRCGWYSAAVALSEQMERSGVTP--DRVTLVTAVTACSRARDL 166
Query: 91 NLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGL 150
+LG ++H + V F ++ V AL++MY L+++ KLF++MP RN+++W ++++G
Sbjct: 167 SLGRRIHVYMDNV-FGFNLPVANALLDMYTKNDCLEEAVKLFEQMPARNIISWTILVSGY 225
Query: 151 VKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITI 210
G+L+ AR LF + ++++ WT +I+ + EAL LFR M + EP T+
Sbjct: 226 GLAGQLDKARVLFNQCKEKDLILWTAMINACVQHGCFEEALTLFRDM-QMQRVEPDRFTV 284
Query: 211 LAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDIS 270
+ +L G + + IH Y E+R D + LID Y+KCG I + ++F
Sbjct: 285 VTLLTCCANLGALDQGEWIHQYAEQRKMK-IDAVLGTALIDMYSKCGHIEKSLEVF--WR 341
Query: 271 VERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEG 330
++ ++ +WT+II G A +G A+E F MQ+ +KP+ VTF+ VL+AC HGGLV+EG
Sbjct: 342 MQGRDATAWTAIICGLATNGQAGRALELFQDMQRSKVKPDGVTFIGVLSACCHGGLVDEG 401
Query: 331 LNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGAC 390
F M E ++ P ++HY CL+++LGRAG L++AE+ +P + ++ LL AC
Sbjct: 402 RKQFHAMREVYQIEPRVEHYSCLVNLLGRAGLLDEAERLIGDVPINKDAMPLFGALLTAC 461
Query: 391 SFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPG 450
HGNVEM ER+T++I E + +LM N+ A R+ D R+R M K G
Sbjct: 462 KAHGNVEMSERLTKRICEQDSQITDVNLLMSNVYATASRWEDVIRVRGKMAHPTVKKNAG 521
Query: 451 CSLV 454
CSL+
Sbjct: 522 CSLI 525
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 94/370 (25%), Positives = 159/370 (42%), Gaps = 73/370 (19%)
Query: 73 DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLF 132
DSFTY F++R L G + HA K GF+ Y ++L+ MY LG + + K+F
Sbjct: 48 DSFTYPFVLRAVGVLKLSVEGRKAHAAAVKTGFRWDAYTGSSLMEMYTMLGRVDIARKVF 107
Query: 133 DEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALA 192
DEMP R LV WN+M+ ++ G A +L E+M V
Sbjct: 108 DEMPSRALVLWNMMVRCYIRCGWYSAAVALSEQMERSGVT-------------------- 147
Query: 193 LFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDT 252
P +T++ + A + D+ + IH Y + F++ V N L+D
Sbjct: 148 ------------PDRVTLVTAVTACSRARDLSLGRRIHVYMDN--VFGFNLPVANALLDM 193
Query: 253 YAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAM------------------------ 288
Y K C+ A KLFE + +N++SWT ++SG+ +
Sbjct: 194 YTKNDCLEEAVKLFEQMPA--RNIISWTILVSGYGLAGQLDKARVLFNQCKEKDLILWTA 251
Query: 289 -------HGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEEC 341
HG +EA+ F MQ ++P+R T +++L C++ G +++G + + E+
Sbjct: 252 MINACVQHGCFEEALTLFRDMQMQRVEPDRFTVVTLLTCCANLGALDQG-EWIHQYAEQR 310
Query: 342 EVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGER 401
++ D LIDM + G +E++ + + D W ++ C N + G R
Sbjct: 311 KMKIDAVLGTALIDMYSKCGHIEKSLEVFWRMQGR--DATAWTAII--CGLATNGQAG-R 365
Query: 402 VTRKILEMER 411
+M+R
Sbjct: 366 ALELFQDMQR 375
>gi|225469326|ref|XP_002268072.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g38010-like [Vitis vinifera]
Length = 590
Score = 239 bits (609), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 155/489 (31%), Positives = 240/489 (49%), Gaps = 81/489 (16%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+NTL+ Y+ + +P+ AFL+Y + I + P D +T+ +++ C G
Sbjct: 73 YNTLIAAYASSCTPKAAFLVYGR---IVGNGFVP-----DMYTFPVVLKACTKFLGVQEG 124
Query: 94 TQLHAVISKVGFQSHVYVN-------------------------------TALVNMYVSL 122
Q+H V K+GF +YV T L++ YV
Sbjct: 125 EQVHGVAVKMGFLCDLYVQNSLLHFYSVCGKWGGAGRVFDEMLVRDVVSWTGLISGYVRT 184
Query: 123 GFLKDSSKLF---DEMPER---------------------------------NLVTWNVM 146
G ++ LF D +P LV N +
Sbjct: 185 GLFDEAINLFLKMDVVPNVATFVSVLVACGRMGYLSMGKGVHGLVYKRAFGIGLVVGNAL 244
Query: 147 ITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPS 206
+ VK L AR LF+E+P R++VSWT II G + + ++L LF M EP
Sbjct: 245 VDMYVKCECLCEARKLFDELPDRDIVSWTSIISGLVQCKQPKDSLELFYDM-QISGVEPD 303
Query: 207 EITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLF 266
I + +VL A G + + + Y E++G +DI + L+D YAKCGCI A +F
Sbjct: 304 RIILTSVLSACASLGALDYGRWVQEYIERQGIE-WDIHIGTALVDMYAKCGCIEMALHIF 362
Query: 267 EDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGL 326
I +N+ +W +++ G AMHG G EA+++F M G++PN VTFL++L AC H GL
Sbjct: 363 NGIP--NRNIFTWNALLGGLAMHGHGHEALKHFELMIGAGIRPNEVTFLAILTACCHSGL 420
Query: 327 VEEGLNFFDKMVEE-CEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRT 385
V EG ++F +M+ + P ++HYGC+ID+L RAG L++A K +P DV++W
Sbjct: 421 VAEGRSYFYQMISQPFNFSPRLEHYGCMIDLLCRAGLLDEAYKFIRNMPLP-PDVLIWGA 479
Query: 386 LLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNA 445
LL AC +GNVE+ + + +LE++ G YVL+ NI A R+ D R+RR+M ++
Sbjct: 480 LLSACKANGNVELSQEILSHLLELKSQDSGVYVLLSNIYATNERWDDVTRVRRLMKDKGI 539
Query: 446 FKVPGCSLV 454
K PG S++
Sbjct: 540 RKFPGSSVI 548
>gi|359480506|ref|XP_003632478.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
Length = 590
Score = 239 bits (609), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 125/347 (36%), Positives = 201/347 (57%), Gaps = 5/347 (1%)
Query: 106 QSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEE 165
Q +V T +++ YV G ++ LF++MP++N+V MITG K G+ + A+ LF++
Sbjct: 199 QKNVVSWTVMISGYVENGKFDEAENLFEQMPDKNIVAMTAMITGYCKEGKTDKAKILFDQ 258
Query: 166 MPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKS 225
+PCR++ SW +I GY + EAL L +M+ +P T+++VL A ++
Sbjct: 259 IPCRDLASWNAMITGYAQNGSGEEALKLHSQMLKMG-MQPDHSTLISVLTACSSLASLQE 317
Query: 226 CQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISG 285
+ H K G+ + I + N LI Y KCG I + F I + ++VSW ++I+
Sbjct: 318 GRKTHVLVLKSGYES-RISICNALITMYCKCGSILDSELAFRQI--DHPDVVSWNAMIAA 374
Query: 286 FAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLP 345
FA HG A+ +FG M+ ++P+ +TFLS+L+AC H G V E LN+F+ M+E +++P
Sbjct: 375 FARHGFYDRALASFGEMRSNRVEPDGITFLSLLSACGHAGKVHESLNWFNSMIESYKIVP 434
Query: 346 DIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRK 405
+H+ CL+D+L R G++E+A K +P E D +W LL AC H NV++GE +K
Sbjct: 435 RPEHFACLVDILSRGGQVEKAYKIIQEMPFE-ADCGIWGALLAACHVHLNVKLGELAAKK 493
Query: 406 ILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCS 452
I+E+E G YV++ NI A G +G+ R+R +M E+ K P S
Sbjct: 494 IVELEPQNSGAYVVLSNIYAAAGMWGEVTRVRGLMREQGVKKQPAYS 540
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 84/271 (30%), Positives = 141/271 (52%), Gaps = 17/271 (6%)
Query: 125 LKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRM 184
+ ++ + F MP+RN +WN MI+GLV++ +E A LFEEMP RNV+S+T ++DGY ++
Sbjct: 125 IDEAWQYFQAMPQRNTASWNAMISGLVRYDRVEEASRLFEEMPRRNVISYTAMVDGYAKI 184
Query: 185 NRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQ-LIHGYGEKRGFTAFDI 243
+A ALF M + + ++ ++ +NG + L +K +I
Sbjct: 185 GEIEQARALFNCM-----PQKNVVSWTVMISGYVENGKFDEAENLFEQMPDK------NI 233
Query: 244 RVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQ 303
+ +I Y K G A LF+ I ++L SW ++I+G+A +G G+EA++ +M
Sbjct: 234 VAMTAMITGYCKEGKTDKAKILFDQIPC--RDLASWNAMITGYAQNGSGEEALKLHSQML 291
Query: 304 KVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRL 363
K+G++P+ T +SVL ACS ++EG +V + I LI M + G +
Sbjct: 292 KMGMQPDHSTLISVLTACSSLASLQEGRKTH-VLVLKSGYESRISICNALITMYCKCGSI 350
Query: 364 EQAEKTALGIPSEITDVVVWRTLLGACSFHG 394
+E I + DVV W ++ A + HG
Sbjct: 351 LDSELAFRQI--DHPDVVSWNAMIAAFARHG 379
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/280 (21%), Positives = 124/280 (44%), Gaps = 17/280 (6%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+N ++ Y+ S ++A L+ Q+ ++ D T ++ C++L+ G
Sbjct: 267 WNAMITGYAQNGSGEEALKLHSQMLKMGMQP--------DHSTLISVLTACSSLASLQEG 318
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
+ H ++ K G++S + + AL+ MY G + DS F ++ ++V+WN MI +
Sbjct: 319 RKTHVLVLKSGYESRISICNALITMYCKCGSILDSELAFRQIDHPDVVSWNAMIAAFARH 378
Query: 154 GELEFARSLFEEMPCRNV----VSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEIT 209
G + A + F EM V +++ ++ + +E+L F M+ P
Sbjct: 379 GFYDRALASFGEMRSNRVEPDGITFLSLLSACGHAGKVHESLNWFNSMIESYKIVPRPEH 438
Query: 210 ILAVLPAIWQNGDV-KSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFED 268
++ + + G V K+ ++I + + + C + K G + +A K+ E
Sbjct: 439 FACLVDILSRGGQVEKAYKIIQEMPFEADCGIWGALLAACHVHLNVKLGEL-AAKKIVE- 496
Query: 269 ISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLK 308
+E +N ++ + + +A GM E G M++ G+K
Sbjct: 497 --LEPQNSGAYVVLSNIYAAAGMWGEVTRVRGLMREQGVK 534
>gi|77554579|gb|ABA97375.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 794
Score = 238 bits (608), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 138/383 (36%), Positives = 211/383 (55%), Gaps = 33/383 (8%)
Query: 70 PLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSS 129
P D+ + SF ++ A S + QLHA++ ++G + V + T L++ Y G L +
Sbjct: 107 PRPDALSLSFALKASARCSDAHTTVQLHALVLRLGVAADVRLLTTLLDSYAKCGDLASAR 166
Query: 130 KLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNE 189
K+FDEM R++ TWN ++ GL + E A +LF R+ S
Sbjct: 167 KVFDEMTVRDVATWNSLLAGLAQGTEPNLALALFH------------------RLANS-- 206
Query: 190 ALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCL 249
F+++ + E EP+E+TI+A L A Q G +K +H + ++ G ++RV N L
Sbjct: 207 ----FQELPSRE--EPNEVTIVAALSACAQIGLLKDGMYVHEFAKRFGLDR-NVRVCNSL 259
Query: 250 IDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKP 309
ID Y+KCG + A +F I E + LVS+ + I +MHG G +A+ F M ++P
Sbjct: 260 IDMYSKCGSLSRALDVFHSIKPEDQTLVSYNAAIQAHSMHGHGGDALRLFDEM-PTRIEP 318
Query: 310 NRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKT 369
+ VT+L+VL C+H GLV++GL F+ M V P++KHYG ++D+LGRAGRL +A T
Sbjct: 319 DGVTYLAVLCGCNHSGLVDDGLRVFNSM----RVAPNMKHYGTIVDLLGRAGRLTEAYDT 374
Query: 370 ALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGR 429
+ +P D+V+W+TLLGA HG VE+ E K+ E+ GDYVL+ N+ A R
Sbjct: 375 VISMPFP-ADIVLWQTLLGAAKMHGVVELAELAANKLAELGSNVDGDYVLLSNVYASKAR 433
Query: 430 FGDAERLRRVMDERNAFKVPGCS 452
+ D R+R M + KVPG S
Sbjct: 434 WMDVGRVRDTMRSNDVRKVPGFS 456
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 72/169 (42%), Gaps = 7/169 (4%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+N+LL + P A L+ +L + S P + T + CA + G
Sbjct: 180 WNSLLAGLAQGTEPNLALALFHRLANSFQELPSREEP--NEVTIVAALSACAQIGLLKDG 237
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEM-PE-RNLVTWNVMITGLV 151
+H + G +V V +L++MY G L + +F + PE + LV++N I
Sbjct: 238 MYVHEFAKRFGLDRNVRVCNSLIDMYSKCGSLSRALDVFHSIKPEDQTLVSYNAAIQAHS 297
Query: 152 KWGELEFARSLFEEMPCR---NVVSWTGIIDGYTRMNRSNEALALFRKM 197
G A LF+EMP R + V++ ++ G ++ L +F M
Sbjct: 298 MHGHGGDALRLFDEMPTRIEPDGVTYLAVLCGCNHSGLVDDGLRVFNSM 346
>gi|357167614|ref|XP_003581249.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21300-like
[Brachypodium distachyon]
Length = 1430
Score = 238 bits (608), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 139/388 (35%), Positives = 212/388 (54%), Gaps = 10/388 (2%)
Query: 73 DSFTYSFLIRTCATLSHPNLGTQLHA-VISKVGFQSHVYVNTALVNMYVSLGFLKDSSKL 131
D T + ++ CA L+ G Q+HA V+ F+ + ++ ALV+MY G + + +
Sbjct: 992 DEVTLASVMSACAGLAADREGRQVHARVVKSDRFREDMVLSNALVDMYAKCGRTRAARCV 1051
Query: 132 FDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEAL 191
FD M R++V+ +ITG + +E A+ +F +M +NV++W +I Y + EAL
Sbjct: 1052 FDRMASRSVVSETSLITGYARSANVEDAQMVFSQMVEKNVIAWNVLIAAYAQNGEEEEAL 1111
Query: 192 ALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGF-----TAFDIRVL 246
LF ++ E P+ T VL A D++ Q H + K GF D+ V
Sbjct: 1112 RLFVRLKR-ESVWPTHYTYGNVLNACGNVADLQLGQQAHVHVLKEGFRFDFGPESDVFVG 1170
Query: 247 NCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVG 306
N L+D Y K G I +K+FE ++ ++ VSW ++I G A +G K+A+ F RM
Sbjct: 1171 NSLVDMYLKTGSIDDGAKVFERMAA--RDNVSWNAMIVGHAQNGRAKDALHLFERMLCSK 1228
Query: 307 LKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQA 366
P+ VT + VL+AC H GLVEEG +F M E+ ++P HY C+ID+LGRAG L++
Sbjct: 1229 ESPDSVTMIGVLSACGHSGLVEEGRRYFRSMTEDHGIIPSQDHYTCMIDLLGRAGHLKEV 1288
Query: 367 EKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAG 426
E+ + E D V+W +LLG+C H NVEMGE K+ E++ G YVL+ N+ A
Sbjct: 1289 EELIKEMSME-PDAVLWASLLGSCRLHKNVEMGEWAAGKLFELDPRNSGPYVLLSNMYAE 1347
Query: 427 VGRFGDAERLRRVMDERNAFKVPGCSLV 454
+G++ D R+R M R K PGCS +
Sbjct: 1348 LGKWADVFRVRSSMKHRGVSKQPGCSWI 1375
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 98/325 (30%), Positives = 170/325 (52%), Gaps = 6/325 (1%)
Query: 75 FTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDE 134
+T S + C + G +HA + + G++ HV+V +++V+MY G + + LF+
Sbjct: 253 YTVSHAVLACRDNNALEEGRCIHAFVLRHGYEHHVHVRSSVVDMYAKCGAMDAAQSLFNL 312
Query: 135 MPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALF 194
P +++V +++GL G + A+ +FE M RN+VSW ++ GY R AL LF
Sbjct: 313 APMKDMVMSTSIVSGLASCGRIADAKRVFEGMKERNLVSWNAMLTGYIRSMDLTGALLLF 372
Query: 195 RKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYA 254
++M E E IT+ +VL A D+ + +H + K GF + I + N L+ Y+
Sbjct: 373 QQMRQ-ETREFDAITLGSVLSACTGILDIGKGEEVHAFAIKCGFFSSPI-LKNALVRMYS 430
Query: 255 KCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTF 314
KCGC+ SA +L ++ SW S+ISG+ H M + A+ +MQ + PN+ TF
Sbjct: 431 KCGCLRSAERLLLFEMGSERDSYSWNSLISGYERHSMSEAALYALTKMQS-EVTPNQSTF 489
Query: 315 LSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIP 374
S L AC++ L+++G+ M+ + + DI LIDM + + + + + P
Sbjct: 490 SSALAACANIFLLKQGMQIHAYMIRKGYEIDDILR-SVLIDMYCKCRQFDYSIRIFEARP 548
Query: 375 SEITDVVVWRTLLGACSFHGNVEMG 399
S DV++W +++ C++ G E G
Sbjct: 549 SR--DVILWNSMIFGCAYSGKGEYG 571
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 109/373 (29%), Positives = 174/373 (46%), Gaps = 44/373 (11%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+N +L Y + A LL++Q++Q FD+ T ++ C + G
Sbjct: 352 WNAMLTGYIRSMDLTGALLLFQQMRQETRE--------FDAITLGSVLSACTGILDIGKG 403
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
++HA K GF S + ALV MY G L+ + +L
Sbjct: 404 EEVHAFAIKCGFFSSPILKNALVRMYSKCGCLRSAERLL--------------------- 442
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
LFE R+ SW +I GY R + S AL KM + E T P++ T +
Sbjct: 443 --------LFEMGSERDSYSWNSLISGYERHSMSEAALYALTKMQS-EVT-PNQSTFSSA 492
Query: 214 LPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVER 273
L A +K IH Y ++G+ DI + + LID Y KC + ++FE +
Sbjct: 493 LAACANIFLLKQGMQIHAYMIRKGYEIDDI-LRSVLIDMYCKCRQFDYSIRIFE--ARPS 549
Query: 274 KNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNF 333
++++ W S+I G A G G+ ++ F MQK G+K + VTFL L +C G V G ++
Sbjct: 550 RDVILWNSMIFGCAYSGKGEYGLDLFDEMQKQGIKADSVTFLGALVSCISEGHVRLGRSY 609
Query: 334 FDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFH 393
F M++E ++P I+HY C+I++LG+ G + + E +P E T +W + C +
Sbjct: 610 FTLMMDE-SIIPRIEHYECMIELLGKHGCMVELEDFVEHMPFEPT-TAMWLRIFDCCREY 667
Query: 394 GNVEMGERVTRKI 406
GN ++GER + I
Sbjct: 668 GNRKLGERAAKCI 680
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 90/339 (26%), Positives = 159/339 (46%), Gaps = 14/339 (4%)
Query: 102 KVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARS 161
K F + ++ LV+ Y LG L D+ ++FDE+P N ++N +++ + G AR+
Sbjct: 788 KSPFVAETFLLNTLVSAYARLGRLPDARRVFDEIPHPNTFSYNALLSAHARLGRPADARA 847
Query: 162 LFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNG 221
LF +P + S+ +I + +R +AL M A ++ + + + L A
Sbjct: 848 LFHAIPDPDQCSYNAVIAALAQHSRGADALLFLAAMHADDFV-LNAYSFASALSACAAEK 906
Query: 222 DVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTS 281
D ++ +H K A D+ + + L+D YAKC A ++FE ++ +N+VSW S
Sbjct: 907 DSRTGVQVHALVSKSPH-AKDVYIGSALLDMYAKCEWPEEARRVFE--AMPERNIVSWNS 963
Query: 282 IISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEEC 341
+I+ + +G EA+ F M K G P+ VT SV++AC+ EG ++V+
Sbjct: 964 LITCYEQNGPVGEALVLFVSMMKAGFVPDEVTLASVMSACAGLAADREGRQVHARVVKSD 1023
Query: 342 EVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGER 401
D+ L+DM + GR A + S VV +L+ + NVE +
Sbjct: 1024 RFREDMVLSNALVDMYAKCGRTRAARCVFDRMASR--SVVSETSLITGYARSANVEDAQM 1081
Query: 402 VTRKILEMERGYGGDYVLMYNIL-AGVGRFGDAERLRRV 439
V +++E V+ +N+L A + G+ E R+
Sbjct: 1082 VFSQMVEKN-------VIAWNVLIAAYAQNGEEEEALRL 1113
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 97/408 (23%), Positives = 175/408 (42%), Gaps = 82/408 (20%)
Query: 71 LFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSK 130
+ ++++++ + CA G Q+HA++SK VY+ +AL++MY + +++ +
Sbjct: 889 VLNAYSFASALSACAAEKDSRTGVQVHALVSKSPHAKDVYIGSALLDMYAKCEWPEEARR 948
Query: 131 LFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEA 190
+F+ MPERN+V+WN +IT C Y + EA
Sbjct: 949 VFEAMPERNIVSWNSLIT-------------------C------------YEQNGPVGEA 977
Query: 191 LALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLI 250
L LF M+ + P E+T+ +V+ A + + +H K D+ + N L+
Sbjct: 978 LVLFVSMMKAGFV-PDEVTLASVMSACAGLAADREGRQVHARVVKSDRFREDMVLSNALV 1036
Query: 251 DTYAKCG------CIF------------------SASKLFEDI-----SVERKNLVSWTS 281
D YAKCG C+F + S ED + KN+++W
Sbjct: 1037 DMYAKCGRTRAARCVFDRMASRSVVSETSLITGYARSANVEDAQMVFSQMVEKNVIAWNV 1096
Query: 282 IISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNAC-----------SHGGLVEEG 330
+I+ +A +G +EA+ F R+++ + P T+ +VLNAC +H +++EG
Sbjct: 1097 LIAAYAQNGEEEEALRLFVRLKRESVWPTHYTYGNVLNACGNVADLQLGQQAHVHVLKEG 1156
Query: 331 LNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGAC 390
FD E D+ L+DM + G ++ K + + D V W ++
Sbjct: 1157 FR-FDFGPES-----DVFVGNSLVDMYLKTGSIDDGAKVFERMAAR--DNVSWNAMIVGH 1208
Query: 391 SFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRR 438
+ +G + + ++L + D V M +L+ G G E RR
Sbjct: 1209 AQNGRAKDALHLFERMLCSKE--SPDSVTMIGVLSACGHSGLVEEGRR 1254
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 124/264 (46%), Gaps = 15/264 (5%)
Query: 143 WNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEY 202
+N I L G + AR LF+ MP R+ SW II +R +EAL+LF M +
Sbjct: 88 FNRAIESLAACGSVADARELFDLMPLRDGGSWNAIITASSRAGHPSEALSLFSNMNSLG- 146
Query: 203 TEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSA 262
P + T+ +VL + D+ + +HG+ KR F + ++ + L+D Y C + A
Sbjct: 147 IRPKDATMASVLSCCAECLDLCGARQLHGHIAKRDFQS-NVILGTALVDVYGNCFLLADA 205
Query: 263 SKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACS 322
+ F+DI N +SW I+ + + GMG AV+ F RM G++P T + AC
Sbjct: 206 RRAFDDIL--EPNAISWNVIVRRYHLAGMGDMAVDMFFRMLSAGVRPLGYTVSHAVLACR 263
Query: 323 HGGLVEEGLNFFDKMVEECEVLPDIKHY----GCLIDMLGRAGRLEQAEKTALGIPSEIT 378
+EEG + + + +H+ ++DM + G ++ A+ P +
Sbjct: 264 DNNALEEG-----RCIHAFVLRHGYEHHVHVRSSVVDMYAKCGAMDAAQSLFNLAP--MK 316
Query: 379 DVVVWRTLLGACSFHGNVEMGERV 402
D+V+ +++ + G + +RV
Sbjct: 317 DMVMSTSIVSGLASCGRIADAKRV 340
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 85/368 (23%), Positives = 153/368 (41%), Gaps = 21/368 (5%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+N ++ S A P +A L+ + + T + ++ CA
Sbjct: 119 WNAIITASSRAGHPSEALSLFSNMNSLGIRPKDA--------TMASVLSCCAECLDLCGA 170
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
QLH I+K FQS+V + TALV++Y + L D+ + FD++ E N ++WNV++
Sbjct: 171 RQLHGHIAKRDFQSNVILGTALVDVYGNCFLLADARRAFDDILEPNAISWNVIVRRYHLA 230
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITI--- 210
G + A +F M V + R N AL R + A E +
Sbjct: 231 GMGDMAVDMFFRMLSAGVRPLGYTVSHAVLACRDNNALEEGRCIHAFVLRHGYEHHVHVR 290
Query: 211 LAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDIS 270
+V+ + G + + Q + + D+ + ++ A CG I A ++FE
Sbjct: 291 SSVVDMYAKCGAMDAAQSLFNLAPMK-----DMVMSTSIVSGLASCGRIADAKRVFE--G 343
Query: 271 VERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEG 330
++ +NLVSW ++++G+ A+ F +M++ + + +T SVL+AC+ G+++ G
Sbjct: 344 MKERNLVSWNAMLTGYIRSMDLTGALLLFQQMRQETREFDAITLGSVLSACT--GILDIG 401
Query: 331 L-NFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGA 389
+C L+ M + G L AE+ L D W +L+
Sbjct: 402 KGEEVHAFAIKCGFFSSPILKNALVRMYSKCGCLRSAERLLLFEMGSERDSYSWNSLISG 461
Query: 390 CSFHGNVE 397
H E
Sbjct: 462 YERHSMSE 469
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 43/78 (55%), Gaps = 2/78 (2%)
Query: 245 VLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQK 304
+ N I++ A CG + A +LF+ + + ++ SW +II+ + G EA+ F M
Sbjct: 87 LFNRAIESLAACGSVADARELFDLMPL--RDGGSWNAIITASSRAGHPSEALSLFSNMNS 144
Query: 305 VGLKPNRVTFLSVLNACS 322
+G++P T SVL+ C+
Sbjct: 145 LGIRPKDATMASVLSCCA 162
>gi|449516814|ref|XP_004165441.1| PREDICTED: pentatricopeptide repeat-containing protein At5g19020,
mitochondrial-like isoform 1 [Cucumis sativus]
Length = 703
Score = 238 bits (608), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 139/405 (34%), Positives = 216/405 (53%), Gaps = 11/405 (2%)
Query: 48 QKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQS 107
+KA LLY +++ H + L + D L+ C G Q H++I K GF
Sbjct: 307 RKALLLYSAMRKSDLHPNEVL--IVD------LLSACGQSVSIEEGRQFHSLIVKNGFVC 358
Query: 108 HVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMP 167
++ +++ Y + + + + + +L + NVMI G K G ++ AR +F+ MP
Sbjct: 359 FDFIQATIISFYAACRRIDLAYLQYQMSDKSHLTSSNVMIVGFTKNGMIDQARQIFDMMP 418
Query: 168 CRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQ 227
++V SW+ +I GY + + AL LF M+ + EP+EIT+++V AI G + +
Sbjct: 419 EKDVFSWSTMISGYAQNELPDVALDLFHGMIDSK-VEPNEITMVSVFSAIAALGKLPEGR 477
Query: 228 LIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFA 287
H Y + D + +ID YAKCG I +A +F I + + W +II G A
Sbjct: 478 WAHEYVCNKVIPLND-NLSAAIIDMYAKCGSIDTALDVFRQIKDKTSTVSPWNAIICGLA 536
Query: 288 MHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDI 347
MHG ++E F +Q+ +K N +TFL VL+AC H GLVE G +F M + V P+I
Sbjct: 537 MHGHANLSLEIFSNLQRRSIKLNSITFLGVLSACCHAGLVEVGERYFWSMKTQHGVEPNI 596
Query: 348 KHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKIL 407
KHYGCL+D+LGR GRL +AE+ +P + DVV+W TLL + HG VE+GER +
Sbjct: 597 KHYGCLVDLLGRVGRLREAEEIVRTMPMK-ADVVIWGTLLASSRTHGEVEIGERAAENLA 655
Query: 408 EMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCS 452
++ +G VL+ N+ A G + DA +RR + + + PG S
Sbjct: 656 RLQPSHGPGRVLLSNLYADAGLWEDAALVRRAIQSQRMIRSPGYS 700
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 117/416 (28%), Positives = 189/416 (45%), Gaps = 79/416 (18%)
Query: 96 LHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGE 155
LHA++ K+ F V ++T L++MY LKD+ +LF+EMP RN V+WNVM+ G VK G
Sbjct: 215 LHALVIKLHFFGLVLISTNLLHMYCVFSSLKDTKRLFNEMPVRNTVSWNVMLKGYVKSGL 274
Query: 156 LEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLP 215
++ AR LFE +P R+V SW +IDG+ +M R +AL L+ M + P+E+ I+ +L
Sbjct: 275 VDQARELFERIPERDVFSWAIMIDGFVQMKRLRKALLLYSAMRKSDL-HPNEVLIVDLLS 333
Query: 216 AIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKC------------------- 256
A Q+ ++ + H K GF FD + +I YA C
Sbjct: 334 ACGQSVSIEEGRQFHSLIVKNGFVCFDF-IQATIISFYAACRRIDLAYLQYQMSDKSHLT 392
Query: 257 ------------GCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQK 304
G I A ++F+ + K++ SW+++ISG+A + + A++ F M
Sbjct: 393 SSNVMIVGFTKNGMIDQARQIFD--MMPEKDVFSWSTMISGYAQNELPDVALDLFHGMID 450
Query: 305 VGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLE 364
++PN +T +SV +A + G + EG + + + L D +IDM + G ++
Sbjct: 451 SKVEPNEITMVSVFSAIAALGKLPEGRWAHEYVCNKVIPLND-NLSAAIIDMYAKCGSID 509
Query: 365 QAEKTALGIPSEITDVVVWRTL-----------------------------------LGA 389
A I + + V W + L A
Sbjct: 510 TALDVFRQIKDKTSTVSPWNAIICGLAMHGHANLSLEIFSNLQRRSIKLNSITFLGVLSA 569
Query: 390 CSFHGNVEMGERVTRKILEMERGYGGD-----YVLMYNILAGVGRFGDAERLRRVM 440
C G VE+GER M+ +G + Y + ++L VGR +AE + R M
Sbjct: 570 CCHAGLVEVGERY---FWSMKTQHGVEPNIKHYGCLVDLLGRVGRLREAEEIVRTM 622
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 87/289 (30%), Positives = 146/289 (50%), Gaps = 33/289 (11%)
Query: 81 IRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNL 140
++ CA+ S + G Q+HA++ K GF S+ ++ +L+NMYV G L + LFD +
Sbjct: 68 LKYCASSSAISSGQQIHAIVLKYGFNSNTFILNSLINMYVKCGLLSSARLLFDSCSVLDS 127
Query: 141 VTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVAC 200
V+ N+M++G VK +LE AR LF +MP R VS+T +I G + + EA+ +F+ M +
Sbjct: 128 VSCNIMMSGYVKLRQLENARQLFAKMPERGCVSYTTMILGLAQNDCWGEAIEVFKDMRSA 187
Query: 201 EYTEPSEITILAVLPAIWQNGDVKSCQLIHG-------YG-------------------- 233
P+E+T+ +V+ A G + +C+++H +G
Sbjct: 188 G-VAPNEVTMASVMSACSHIGGIWNCRMLHALVIKLHFFGLVLISTNLLHMYCVFSSLKD 246
Query: 234 EKRGFTAFDIR---VLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHG 290
KR F +R N ++ Y K G + A +LFE I +++ SW +I GF
Sbjct: 247 TKRLFNEMPVRNTVSWNVMLKGYVKSGLVDQARELFERI--PERDVFSWAIMIDGFVQMK 304
Query: 291 MGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVE 339
++A+ + M+K L PN V + +L+AC +EEG F +V+
Sbjct: 305 RLRKALLLYSAMRKSDLHPNEVLIVDLLSACGQSVSIEEGRQFHSLIVK 353
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 69/148 (46%), Gaps = 30/148 (20%)
Query: 207 EITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLF 266
E+++++ L + + S Q IH K GF + + +LN LI+ Y KCG + SA LF
Sbjct: 61 ELSVVSALKYCASSSAISSGQQIHAIVLKYGFNS-NTFILNSLINMYVKCGLLSSARLLF 119
Query: 267 EDISV-----------------------------ERKNLVSWTSIISGFAMHGMGKEAVE 297
+ SV + VS+T++I G A + EA+E
Sbjct: 120 DSCSVLDSVSCNIMMSGYVKLRQLENARQLFAKMPERGCVSYTTMILGLAQNDCWGEAIE 179
Query: 298 NFGRMQKVGLKPNRVTFLSVLNACSHGG 325
F M+ G+ PN VT SV++ACSH G
Sbjct: 180 VFKDMRSAGVAPNEVTMASVMSACSHIG 207
>gi|242096366|ref|XP_002438673.1| hypothetical protein SORBIDRAFT_10g024090 [Sorghum bicolor]
gi|241916896|gb|EER90040.1| hypothetical protein SORBIDRAFT_10g024090 [Sorghum bicolor]
Length = 588
Score = 238 bits (608), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 142/426 (33%), Positives = 228/426 (53%), Gaps = 56/426 (13%)
Query: 77 YSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMP 136
Y I C G Q+HA + G++ +Y+ T LV MY G L+D+ + D MP
Sbjct: 38 YDDAITECVERRALREGRQVHARMVAAGYRPALYLATRLVIMYARCGALEDARNVLDGMP 97
Query: 137 ERNLVTWNVMITGL---------------------------------------------- 150
ERN+V+W MI+G
Sbjct: 98 ERNVVSWTAMISGYSQNERPDQAWELFIMMLRAGIHQVKQVHAFAVKTNFELHMFVGSSL 157
Query: 151 ----VKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPS 206
K ++ AR +F+ +P R+VVS+T I+ GYT++ EAL LFR ++ E + +
Sbjct: 158 LDMYAKSENIQEARRVFDMLPARDVVSYTAILSGYTQLGLDEEALDLFR-LLYNEGMQCN 216
Query: 207 EITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLF 266
++T A+L A+ + + +HG +R F + + N LID Y+KCG + + ++F
Sbjct: 217 QVTFTALLNALSGLSSMDYGKQVHGLILRRELPFF-MALQNSLIDMYSKCGKLLYSRRVF 275
Query: 267 EDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGL 326
+ S+ +++VSW +++ G+ HG+ E V+ F M +KP+ VT L+VL+ SHGGL
Sbjct: 276 D--SMPERSVVSWNAMLMGYGRHGLAHEVVQLFRSMCD-EVKPDSVTLLAVLSGYSHGGL 332
Query: 327 VEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTL 386
V+EGL+ FD +V+E L + +HYGC+ID+LGR+G+L++A +P + T +W +L
Sbjct: 333 VDEGLDMFDHIVKEQSTLLNTEHYGCVIDLLGRSGQLQKALNLIEKMPFQPTR-AIWGSL 391
Query: 387 LGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAF 446
LGAC H NV +GE V +K+L++E G+YV++ NI A G + D R+R++M ++
Sbjct: 392 LGACRVHTNVHVGEFVAQKLLDIEPENAGNYVILSNIYAAAGMWKDVFRVRKLMLKKTVI 451
Query: 447 KVPGCS 452
K PG S
Sbjct: 452 KEPGRS 457
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 70/299 (23%), Positives = 123/299 (41%), Gaps = 62/299 (20%)
Query: 16 QIHSHLLTTNSLLHHSQLF--NTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPL----- 68
Q+H+ + TN LH +F ++LL Y+ +E+ Q+A ++ L S++ +
Sbjct: 137 QVHAFAVKTNFELH---MFVGSSLLDMYAKSENIQEARRVFDMLPARDVVSYTAILSGYT 193
Query: 69 -----PPLFDSF-------------TYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVY 110
D F T++ L+ + LS + G Q+H +I + +
Sbjct: 194 QLGLDEEALDLFRLLYNEGMQCNQVTFTALLNALSGLSSMDYGKQVHGLILRRELPFFMA 253
Query: 111 VNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRN 170
+ +L++MY G L S ++FD MPER++V+WN M+
Sbjct: 254 LQNSLIDMYSKCGKLLYSRRVFDSMPERSVVSWNAMLM---------------------- 291
Query: 171 VVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIH 230
GY R ++E + LFR M C+ +P +T+LAVL G V +
Sbjct: 292 ---------GYGRHGLAHEVVQLFRSM--CDEVKPDSVTLLAVLSGYSHGGLVDEGLDMF 340
Query: 231 GYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMH 289
+ K T + C+ID + G + A L E + + + W S++ +H
Sbjct: 341 DHIVKEQSTLLNTEHYGCVIDLLGRSGQLQKALNLIEKMPFQPTRAI-WGSLLGACRVH 398
>gi|15228028|ref|NP_181820.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206274|sp|Q9SJG6.1|PP200_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g42920, chloroplastic; Flags: Precursor
gi|4512663|gb|AAD21717.1| hypothetical protein [Arabidopsis thaliana]
gi|20197867|gb|AAM15291.1| hypothetical protein [Arabidopsis thaliana]
gi|110738441|dbj|BAF01146.1| hypothetical protein [Arabidopsis thaliana]
gi|330255093|gb|AEC10187.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 559
Score = 238 bits (608), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 144/422 (34%), Positives = 226/422 (53%), Gaps = 11/422 (2%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNL 92
++NT++ +S + P+ A ++ + S S P TY + + L
Sbjct: 91 VWNTIIRGFSRSSFPEMAISIFIDM---LCSSPSVKP---QRLTYPSVFKAYGRLGQARD 144
Query: 93 GTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVK 152
G QLH ++ K G + ++ +++MYV+ G L ++ ++F M ++V WN MI G K
Sbjct: 145 GRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAK 204
Query: 153 WGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILA 212
G ++ A++LF+EMP RN VSW +I G+ R R +AL +FR+M + +P T+++
Sbjct: 205 CGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKD-VKPDGFTMVS 263
Query: 213 VLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVE 272
+L A G + + IH Y + F I V+ LID Y KCGCI +FE
Sbjct: 264 LLNACAYLGASEQGRWIHEYIVRNRFELNSI-VVTALIDMYCKCGCIEEGLNVFE--CAP 320
Query: 273 RKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLN 332
+K L W S+I G A +G + A++ F +++ GL+P+ V+F+ VL AC+H G V
Sbjct: 321 KKQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADE 380
Query: 333 FFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSF 392
FF M E+ + P IKHY ++++LG AG LE+AE +P E D V+W +LL AC
Sbjct: 381 FFRLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVE-EDTVIWSSLLSACRK 439
Query: 393 HGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCS 452
GNVEM +R + + +++ YVL+ N A G F +A R +M ER K GCS
Sbjct: 440 IGNVEMAKRAAKCLKKLDPDETCGYVLLSNAYASYGLFEEAVEQRLLMKERQMEKEVGCS 499
Query: 453 LV 454
+
Sbjct: 500 SI 501
>gi|357123975|ref|XP_003563682.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like [Brachypodium distachyon]
Length = 527
Score = 238 bits (608), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 147/450 (32%), Positives = 236/450 (52%), Gaps = 26/450 (5%)
Query: 19 SHLLTTNSLLHHSQLFNTLLHFYSLAESPQKAFLLYKQLQQIYTH--------------S 64
S L+ +LL + + L E P +A +++ + + Y
Sbjct: 85 SSLMDMYTLLGRADVARKLFD-----EMPHRALVVWNMMIRCYVRCGRYTAAIALAEEME 139
Query: 65 HSPLPPLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGF 124
S L P D T + C+ +LG ++HA + V F + V AL++MY+ G
Sbjct: 140 RSGLTP--DKVTLVTSVTVCSRAGDLSLGRRIHAYMDGV-FGFSLPVANALLDMYMKNGC 196
Query: 125 LKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRM 184
L+++ KLF++MP RN+++W ++++G G+L+ AR LF + ++++ WT +I+ +
Sbjct: 197 LEEAVKLFEQMPSRNIISWTILVSGYAFAGQLDKARVLFYQCSEKDLIMWTAMINACVQH 256
Query: 185 NRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIR 244
EAL+LFR+M + EP TI+ +L G + + IH + R D
Sbjct: 257 GCFEEALSLFREM-QMQRVEPDRFTIVTLLTCCANLGALDQGEWIHQFAVDRKMKV-DAV 314
Query: 245 VLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQK 304
+ LID YAKCG + + ++FE + + ++ +WTSII G A +G A+E F M++
Sbjct: 315 LGTALIDMYAKCGHVKKSMEVFEQM--QGRDTTAWTSIICGLATNGQAGRALELFEDMER 372
Query: 305 VGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLE 364
+KP+ +TF+ VL+AC HGGLV+EG F M + + P I+HY CL+++LGRAG L+
Sbjct: 373 SKVKPDSITFIGVLSACCHGGLVDEGRKQFHAMKDVYRIPPRIEHYSCLVNLLGRAGLLD 432
Query: 365 QAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNIL 424
+AEK I + ++ LL AC GNVEM ER+T++I E +LM N+
Sbjct: 433 EAEKLIRDIQINKDAMPLFGALLTACKAQGNVEMSERLTKRIGEQGYQIPDVNLLMSNVY 492
Query: 425 AGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
A R+ DA R+R M K GCSL+
Sbjct: 493 ATASRWEDAIRVRSKMAHPTIKKTAGCSLI 522
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 110/379 (29%), Positives = 169/379 (44%), Gaps = 51/379 (13%)
Query: 73 DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLF 132
DSFTY F++R L G + HA K GF Y ++L++MY LG + KLF
Sbjct: 45 DSFTYPFVLRAIGVLKLSVEGRKAHAAAMKTGFWWDAYTASSLMDMYTLLGRADVARKLF 104
Query: 133 DEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALA 192
DEMP R LV WN+MI V+ G A +L EE M RS
Sbjct: 105 DEMPHRALVVWNMMIRCYVRCGRYTAAIALAEE------------------MERSG---- 142
Query: 193 LFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDT 252
P ++T++ + + GD+ + IH Y + G F + V N L+D
Sbjct: 143 ----------LTPDKVTLVTSVTVCSRAGDLSLGRRIHAYMD--GVFGFSLPVANALLDM 190
Query: 253 YAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRV 312
Y K GC+ A KLFE + +N++SWT ++SG+A G +A F + + L +
Sbjct: 191 YMKNGCLEEAVKLFEQMP--SRNIISWTILVSGYAFAGQLDKARVLFYQCSEKDL----I 244
Query: 313 TFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAE---KT 369
+ +++NAC G EE L+ F +M + V PD L+ G L+Q E +
Sbjct: 245 MWTAMINACVQHGCFEEALSLFREMQMQ-RVEPDRFTIVTLLTCCANLGALDQGEWIHQF 303
Query: 370 ALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGR 429
A+ ++ D V+ L+ + G+V+ V E+ G D +I+ G+
Sbjct: 304 AVDRKMKV-DAVLGTALIDMYAKCGHVKKSMEV------FEQMQGRDTTAWTSIICGLAT 356
Query: 430 FGDAERLRRVMDERNAFKV 448
G A R + ++ KV
Sbjct: 357 NGQAGRALELFEDMERSKV 375
>gi|242095216|ref|XP_002438098.1| hypothetical protein SORBIDRAFT_10g007970 [Sorghum bicolor]
gi|241916321|gb|EER89465.1| hypothetical protein SORBIDRAFT_10g007970 [Sorghum bicolor]
Length = 596
Score = 238 bits (608), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 132/380 (34%), Positives = 205/380 (53%), Gaps = 33/380 (8%)
Query: 73 DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLF 132
D+ + SF ++ A S QLHA++ ++G + V + T L++ Y G L + ++F
Sbjct: 119 DALSLSFALKATARCSDAFATLQLHAILVRLGVAADVRLMTTLLDSYAKCGDLASARRVF 178
Query: 133 DEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALA 192
DEM R++ TWN ++ GL + E A LF +
Sbjct: 179 DEMSVRDVATWNALLAGLAQGTEPNLALVLFRRLA------------------------G 214
Query: 193 LFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDT 252
FR++ E EP+E+T++A L A Q G +K H + G ++RV N LID
Sbjct: 215 SFRELPPRE--EPNEVTVVAALSACAQLGALKDGLAAHDFARTIGAVG-NVRVCNALIDM 271
Query: 253 YAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRV 312
Y+KCG + A ++F I +E + LVS+ + I +MHG G++A++ F M ++P+ V
Sbjct: 272 YSKCGSLSRALEVFHSIKLEDRTLVSYNATIQALSMHGHGEDALKLFDEM-PARIEPDEV 330
Query: 313 TFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALG 372
T+L+VL C+H GLV++G FD M V P++KHYG ++D+LGRAGRL +A +
Sbjct: 331 TYLAVLGGCNHAGLVDDGRRVFDSM----RVPPNMKHYGTIVDLLGRAGRLAEAHDMIMH 386
Query: 373 IPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGD 432
+P D+V+W+TLLGA HGNV++ E K+ ++ GDYVL+ N+ A R+ D
Sbjct: 387 MPFP-ADIVLWQTLLGAAKMHGNVDLAELAATKLADLGSNVDGDYVLLSNVYASKSRWVD 445
Query: 433 AERLRRVMDERNAFKVPGCS 452
R+R M + KVPG S
Sbjct: 446 VGRVRDTMRSNDVKKVPGFS 465
>gi|297846530|ref|XP_002891146.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336988|gb|EFH67405.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 554
Score = 238 bits (608), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 135/384 (35%), Positives = 213/384 (55%), Gaps = 7/384 (1%)
Query: 73 DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLF 132
D T + C+ L + +G +++ + F+ V ALV+M+ G L + +F
Sbjct: 131 DEGTIVSTLSACSVLKNLEIGERIYRYVV-TEFEMSVRTGNALVDMFCKCGCLDKARAIF 189
Query: 133 DEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALA 192
D M ++N+ W M++G V G + AR LFE P ++VV WT +++GY + NR +EAL
Sbjct: 190 DSMRDKNVKCWTSMVSGYVSNGRTDEARELFERSPVKDVVLWTAMMNGYVQFNRFDEALE 249
Query: 193 LFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDT 252
LFR M P ++++L Q G ++ + IHGY + T D V L+D
Sbjct: 250 LFRCMQTAR-IRPDNFVLVSLLTGCAQTGALEQGKWIHGYIRENRVTV-DKVVGTALVDM 307
Query: 253 YAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRV 312
YAKCGCI +A +F ++ + ++ SWTS+I G A +GM A++ + M+ VG++ + +
Sbjct: 308 YAKCGCIETALGVFYEM--KERDTASWTSLIYGLATNGMSGRALDLYYEMENVGVRLDDI 365
Query: 313 TFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALG 372
TF++VL ACSHGG V EG F M E ++ P +HY CLID+L RAG L++AE+
Sbjct: 366 TFVAVLTACSHGGFVAEGRRIFYSMTERHKIQPKSEHYSCLIDLLCRAGLLDEAEELIDK 425
Query: 373 IPSE--ITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRF 430
+ E T V V+ +LL A +GNV++ ERV K+ ++E + L+ ++ A R+
Sbjct: 426 MHGERDKTLVPVYCSLLSAARNYGNVKIAERVAEKLEKVEVSDSSAHTLLASVYASANRW 485
Query: 431 GDAERLRRVMDERNAFKVPGCSLV 454
D +RR M + K PGCS +
Sbjct: 486 EDVTNVRRKMKDLGIRKFPGCSSI 509
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 116/447 (25%), Positives = 187/447 (41%), Gaps = 94/447 (21%)
Query: 42 SLAESPQ--KAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLGTQLHAV 99
SLAES K L+ +L+ L P D+FT ++++ L G ++H
Sbjct: 4 SLAESKSFTKVLALFGELRG------QGLYP--DNFTLPVVLKSIGRLRKVIEGEKVHGY 55
Query: 100 ISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFA 159
K G +S YV +L+ MY +LG ++E
Sbjct: 56 AVKTGLESDSYVCNSLMGMYAALG-------------------------------KMEIT 84
Query: 160 RSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQ 219
+F+EMP R+VVSW G+I Y R +A+++F++M + E TI++ L A
Sbjct: 85 HKVFDEMPERDVVSWNGLISSYVGHGRFEDAISVFQRMSRESNLKADEGTIVSTLSACSV 144
Query: 220 NGDVKSCQLIHGYGEKRGFTAFD--IRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLV 277
+++ + I+ Y T F+ +R N L+D + KCGC+ A +F+ S+ KN+
Sbjct: 145 LKNLEIGERIYRY----VVTEFEMSVRTGNALVDMFCKCGCLDKARAIFD--SMRDKNVK 198
Query: 278 SWTSIISGFAMHGMGKEAVENFGR-------------------------------MQKVG 306
WTS++SG+ +G EA E F R MQ
Sbjct: 199 CWTSMVSGYVSNGRTDEARELFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAR 258
Query: 307 LKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQA 366
++P+ +S+L C+ G +E+G + + E V D L+DM + G +E
Sbjct: 259 IRPDNFVLVSLLTGCAQTGALEQG-KWIHGYIRENRVTVDKVVGTALVDMYAKCGCIE-- 315
Query: 367 EKTALGIPSEIT--DVVVWRTLLGACSFHGNVEMGERVTRKILEMER-GYGGDYVLMYNI 423
TALG+ E+ D W +L+ + +G M R EME G D + +
Sbjct: 316 --TALGVFYEMKERDTASWTSLIYGLATNG---MSGRALDLYYEMENVGVRLDDITFVAV 370
Query: 424 LAGVGRFGDAERLRRV---MDERNAFK 447
L G RR+ M ER+ +
Sbjct: 371 LTACSHGGFVAEGRRIFYSMTERHKIQ 397
>gi|413937828|gb|AFW72379.1| hypothetical protein ZEAMMB73_412000 [Zea mays]
Length = 471
Score = 238 bits (608), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 136/388 (35%), Positives = 220/388 (56%), Gaps = 9/388 (2%)
Query: 70 PLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVY--VNTALVNMYVSLGFLKD 127
P + F Y ++R + + +H+ K GF + Y + T+L++ Y + D
Sbjct: 55 PSPNQFVYPLVLRAACAVD-VRIVRSIHSHACKSGFCGYEYDVIRTSLLDCYSRHAMMAD 113
Query: 128 SSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRS 187
+ KLFD + ER++V+W +++G + G++ A LFE M R+V +W II G ++
Sbjct: 114 ARKLFDGLTERSVVSWTALVSGYARAGKIGDAIMLFERMTERDVAAWNAIITGCSQNRLF 173
Query: 188 NEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLN 247
EA+ +F +MV P+ TI VL A G +K +LIH R F VLN
Sbjct: 174 AEAVGIFGRMVGTGL-RPNATTISCVLSACGHLGMLKIGKLIHCCA-WRTCVGFGSSVLN 231
Query: 248 CLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGL 307
LID Y KCG + A+ +F ++S ++L +W S+I+ A+HG K A+ F M+ G+
Sbjct: 232 GLIDMYGKCGNLEGATWIFYEVS--DRSLTAWNSLINCLALHGHSKCAISVFNEMRGEGV 289
Query: 308 KPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAE 367
+P+ +TF+ +LNAC+HGG V+EG+ +F+ M E + P+I+HYGC+I++LGRAGR + A
Sbjct: 290 EPDVITFVGLLNACTHGGFVDEGIKYFELMQHEHGIEPEIEHYGCIINLLGRAGRFQDAL 349
Query: 368 KTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGV 427
+ E +D V+W +LL AC H NVE+ E RK+LE++ V++ N+ +
Sbjct: 350 NVISNMRIE-SDEVIWGSLLNACRVHRNVELAELAIRKLLELDPNNANYVVMLANVYSEG 408
Query: 428 GRFGDAERLRRVMDERN-AFKVPGCSLV 454
G + + + R+ M+E N K+PGCS +
Sbjct: 409 GLWEEVRKARKFMEEENIGKKLPGCSWI 436
>gi|414587348|tpg|DAA37919.1| TPA: hypothetical protein ZEAMMB73_411767 [Zea mays]
Length = 920
Score = 238 bits (607), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 149/492 (30%), Positives = 240/492 (48%), Gaps = 83/492 (16%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNL 92
L+N +L Y K+F ++ Q+Q H + FTY ++RTC L
Sbjct: 313 LWNLMLVAYGQISDLAKSFEIFGQMQATGIHP--------NKFTYPCILRTCTCTGQIEL 364
Query: 93 GTQLHAVISKVGFQSHVYVNTALVNM-------------------------------YVS 121
G Q+H++ K GF+S +YV+ L++M YV
Sbjct: 365 GEQIHSLSIKNGFESDMYVSGVLIDMYSKYRCLDKARKILEMLEKRDVVSWTSMIAGYVQ 424
Query: 122 LGFLKDSSKLFDEMPE---------------------------------------RNLVT 142
F +++ F EM + ++
Sbjct: 425 HDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQIHARVYVSGYAADISI 484
Query: 143 WNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEY 202
WN ++ + G E A SLF E+ ++ ++W G+I G+ + +AL +F KM
Sbjct: 485 WNTLVNLYARCGRSEEAFSLFREIDHKDEITWNGLISGFGQSRLYEQALMVFMKMSQAG- 543
Query: 203 TEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSA 262
+ + T ++ + A+ D+K + +HG K G T+ + V N LI Y KCG I A
Sbjct: 544 AKYNVFTFISAISALANLADIKQGKQVHGRAVKTGHTS-ETEVANALISLYGKCGSIEDA 602
Query: 263 SKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACS 322
+F ++S+ +N VSW +II+ + HG G EA++ F +M++ GLKPN VTF+ VL ACS
Sbjct: 603 KMIFSEMSL--RNEVSWNTIITSCSQHGRGLEALDLFDQMKQEGLKPNDVTFIGVLAACS 660
Query: 323 HGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVV 382
H GLVEEGL++F M + P HY C++D+LGRAG+L++A + +P + ++
Sbjct: 661 HVGLVEEGLSYFKSMSNVYGLNPIPDHYACVVDILGRAGQLDRARRFVDEMPI-TANAMI 719
Query: 383 WRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDE 442
WRTLL AC H N+E+GE + +LE+E YVL+ N A G++ + +++R++M +
Sbjct: 720 WRTLLSACKVHKNIEIGELAAKHLLELEPHDSASYVLLSNAYAVTGKWANRDQVRKMMKD 779
Query: 443 RNAFKVPGCSLV 454
R K PG S +
Sbjct: 780 RGIRKEPGRSWI 791
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 86/333 (25%), Positives = 150/333 (45%), Gaps = 44/333 (13%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
FNTL+ ++ + A ++ ++Q S L P D T + L+ CA++ G
Sbjct: 213 FNTLISGHAQCGHGECALQIFDEMQL------SGLRP--DCVTVASLLAACASVGDLQKG 264
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
QLH+ + K G +L+++YV K
Sbjct: 265 KQLHSYLLKAGMSFDYITEGSLLDLYV-------------------------------KC 293
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
G++E A +F NVV W ++ Y +++ ++ +F +M A P++ T +
Sbjct: 294 GDIETAHDIFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATG-IHPNKFTYPCI 352
Query: 214 LPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVER 273
L G ++ + IH K GF + D+ V LID Y+K C+ A K+ E +E+
Sbjct: 353 LRTCTCTGQIELGEQIHSLSIKNGFES-DMYVSGVLIDMYSKYRCLDKARKILE--MLEK 409
Query: 274 KNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNF 333
+++VSWTS+I+G+ H +EA+ F MQ G+ P+ + S +AC+ + +GL
Sbjct: 410 RDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQI 469
Query: 334 FDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQA 366
+ V DI + L+++ R GR E+A
Sbjct: 470 HAR-VYVSGYAADISIWNTLVNLYARCGRSEEA 501
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 104/432 (24%), Positives = 176/432 (40%), Gaps = 80/432 (18%)
Query: 48 QKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQS 107
++AF LY Q+ H + +P + S ++ C G +HA + K F S
Sbjct: 126 KEAFRLYSQM-----HWTAVIPT---PYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCS 177
Query: 108 HVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMP 167
+V AL+ +Y+ G K + ++F +M + VT+N +I+G + G E A +F+EM
Sbjct: 178 ETFVGNALIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQ 237
Query: 168 CRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQ 227
+ P +T+ ++L A GD++ +
Sbjct: 238 LSGL--------------------------------RPDCVTVASLLAACASVGDLQKGK 265
Query: 228 LIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFA 287
+H Y K G + FD L+D Y KCG I +A +F +R N+V W ++ +
Sbjct: 266 QLHSYLLKAGMS-FDYITEGSLLDLYVKCGDIETAHDIFN--LGDRTNVVLWNLMLVAYG 322
Query: 288 MHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDI 347
++ E FG+MQ G+ PN+ T+ +L C+ G +E G ++ D+
Sbjct: 323 QISDLAKSFEIFGQMQATGIHPNKFTYPCILRTCTCTGQIELGEQIHSLSIKN-GFESDM 381
Query: 348 KHYGCLIDMLGRAGRLEQAEKT---------------------------ALGIPSEITDV 380
G LIDM + L++A K AL E+ D
Sbjct: 382 YVSGVLIDMYSKYRCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALATFKEMQDC 441
Query: 381 VVWRTLLGACSFHGNVEMGERVTRKILEME-----RGYGGDYVL---MYNILAGVGRFGD 432
VW +G S + G + R+ L++ GY D + + N+ A GR +
Sbjct: 442 GVWPDNIGLAS-AASACAGIKAMRQGLQIHARVYVSGYAADISIWNTLVNLYARCGRSEE 500
Query: 433 AERLRRVMDERN 444
A L R +D ++
Sbjct: 501 AFSLFREIDHKD 512
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 73/249 (29%), Positives = 124/249 (49%), Gaps = 13/249 (5%)
Query: 144 NVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYT 203
N++I K G + AR +F+E+ R+ VSW ++ GY + EA L+ +M +T
Sbjct: 82 NLLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQRGLGKEAFRLYSQM---HWT 138
Query: 204 E--PSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFS 261
P+ + +VL A + ++IH K+ F + + V N LI Y G
Sbjct: 139 AVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCS-ETFVGNALIALYLGFGSFKL 197
Query: 262 ASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNAC 321
A ++F D+ + V++ ++ISG A G G+ A++ F MQ GL+P+ VT S+L AC
Sbjct: 198 AERVFCDMLFCDR--VTFNTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLLAAC 255
Query: 322 SHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKT-ALGIPSEITDV 380
+ G +++G +++ I G L+D+ + G +E A LG + T+V
Sbjct: 256 ASVGDLQKGKQLHSYLLKAGMSFDYITE-GSLLDLYVKCGDIETAHDIFNLG---DRTNV 311
Query: 381 VVWRTLLGA 389
V+W +L A
Sbjct: 312 VLWNLMLVA 320
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 100/212 (47%), Gaps = 10/212 (4%)
Query: 229 IHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAM 288
IH RG A D + N LID YAK G ++ A ++F+++S ++ VSW +++SG+A
Sbjct: 65 IHATSVVRGLGA-DRLIGNLLIDLYAKNGLVWQARQVFKELS--SRDHVSWVAMLSGYAQ 121
Query: 289 HGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIK 348
G+GKEA + +M + P SVL+AC+ G L +G V + +
Sbjct: 122 RGLGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQG-RMIHAQVYKQAFCSETF 180
Query: 349 HYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILE 408
LI + G + AE+ + D V + TL+ S H GE + E
Sbjct: 181 VGNALIALYLGFGSFKLAERVFCDML--FCDRVTFNTLI---SGHAQCGHGECALQIFDE 235
Query: 409 ME-RGYGGDYVLMYNILAGVGRFGDAERLRRV 439
M+ G D V + ++LA GD ++ +++
Sbjct: 236 MQLSGLRPDCVTVASLLAACASVGDLQKGKQL 267
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 94/209 (44%), Gaps = 28/209 (13%)
Query: 16 QIHSHLLTTNSLLHHSQLFNTLLHFYSLAESPQKAFLLYKQLQ----------------- 58
QIH+ + + S ++NTL++ Y+ ++AF L++++
Sbjct: 468 QIHARVYVSGYAADIS-IWNTLVNLYARCGRSEEAFSLFREIDHKDEITWNGLISGFGQS 526
Query: 59 QIYTHS------HSPLPPLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVN 112
++Y + S ++ FT+ I A L+ G Q+H K G S V
Sbjct: 527 RLYEQALMVFMKMSQAGAKYNVFTFISAISALANLADIKQGKQVHGRAVKTGHTSETEVA 586
Query: 113 TALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCR--- 169
AL+++Y G ++D+ +F EM RN V+WN +IT + G A LF++M
Sbjct: 587 NALISLYGKCGSIEDAKMIFSEMSLRNEVSWNTIITSCSQHGRGLEALDLFDQMKQEGLK 646
Query: 170 -NVVSWTGIIDGYTRMNRSNEALALFRKM 197
N V++ G++ + + E L+ F+ M
Sbjct: 647 PNDVTFIGVLAACSHVGLVEEGLSYFKSM 675
>gi|359482590|ref|XP_002284545.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Vitis vinifera]
Length = 648
Score = 238 bits (607), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 134/426 (31%), Positives = 229/426 (53%), Gaps = 45/426 (10%)
Query: 29 HHSQLFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLS 88
H+ L+N L+ Y+ + A LY Q+ + + P D+FT+ F+++ CA LS
Sbjct: 139 HNIFLWNVLIRGYAWNGPYEAAVQLYYQM---FDYGLVP-----DNFTFPFVLKACAALS 190
Query: 89 HPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMIT 148
G ++H + + G++ V+V AL++MY G +
Sbjct: 191 AIEHGREIHEHVVQTGWEKDVFVGAALIDMYAKCGCVGS--------------------- 229
Query: 149 GLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEI 208
AR +F+++ R+ V W ++ Y++ + L+L +MV P+E
Sbjct: 230 ----------AREVFDKILVRDAVLWNSMLAAYSQNGHPDACLSLCSEMVLTGL-RPTEA 278
Query: 209 TILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFED 268
T++ + A N + + +HG ++ F + D +V L+D YAKCG + A LFE
Sbjct: 279 TLVTAISASADNAALPQGRELHGLSWRQEFESHD-KVKTALVDMYAKCGSVRVARNLFER 337
Query: 269 ISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVE 328
+ V+R +VSW ++I+G+AMHG EA++ F M +V KP+ +TF+ VL+ACSHGGL+E
Sbjct: 338 LGVKR--VVSWNAMITGYAMHGHATEALDLFEEMNRVA-KPDHITFVGVLSACSHGGLLE 394
Query: 329 EGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLG 388
EG FF+ M+ + ++ P ++HY C++D+LG +GRL++A + + + D VW LL
Sbjct: 395 EGWMFFETMIRDYKIDPTVQHYTCMVDLLGHSGRLDEAYNLIMQM-KVLPDSGVWGALLN 453
Query: 389 ACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKV 448
+C H NVE+GE +++E+E G+YV++ NI A G++ +LR++M +R K
Sbjct: 454 SCKIHANVELGEIALERLIELEPDDAGNYVILSNIYAQAGKWEGVAKLRKLMTDRRLKKS 513
Query: 449 PGCSLV 454
CS +
Sbjct: 514 IACSWI 519
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 84/175 (48%), Gaps = 6/175 (3%)
Query: 223 VKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSI 282
+K + +H GF FD + L++ Y C + SA LF+ I + N+ W +
Sbjct: 91 IKPGKQLHAQVCLAGF-GFDTVIATKLVNLYCVCDSLSSARLLFDRIP--KHNIFLWNVL 147
Query: 283 ISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECE 342
I G+A +G + AV+ + +M GL P+ TF VL AC+ +E G + +V+
Sbjct: 148 IRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKACAALSAIEHGREIHEHVVQT-G 206
Query: 343 VLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVE 397
D+ LIDM + G + A + I + D V+W ++L A S +G+ +
Sbjct: 207 WEKDVFVGAALIDMYAKCGCVGSAREVFDKI--LVRDAVLWNSMLAAYSQNGHPD 259
>gi|359496846|ref|XP_002272372.2| PREDICTED: uncharacterized protein LOC100258406 [Vitis vinifera]
Length = 1286
Score = 238 bits (607), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 144/461 (31%), Positives = 237/461 (51%), Gaps = 60/461 (13%)
Query: 17 IHSHLLTTNSLLHHSQLFNTLLHFYS-----------LAESPQKAFLLYKQLQQIYTHSH 65
+H+HL+ ++ L +H L N +++ Y+ E P K + + L ++ ++
Sbjct: 109 VHAHLVDSHFLDNHLVLQNIIVNMYAKCGCLDDARRMFDEMPTKDMVTWTALIAGFSQNN 168
Query: 66 SPLPPLF------------DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNT 113
P L + FT S L++ + + GTQLHA K G+QS VYV +
Sbjct: 169 RPRDALLLFPQMLRLGFQPNHFTLSSLLKASGSEHGLDPGTQLHAFCLKYGYQSSVYVGS 228
Query: 114 ALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVS 173
ALV+MY + G ++ A+ F+ MP ++ VS
Sbjct: 229 ALVDMYA-------------------------------RCGHMDAAQLAFDGMPTKSEVS 257
Query: 174 WTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYG 233
W +I G+ R AL L KM + +P+ T +VL A G ++ + +H +
Sbjct: 258 WNALISGHARKGEGEHALHLLWKMQRKNF-QPTHFTYSSVLSACASIGALEQGKWVHAHM 316
Query: 234 EKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGK 293
K G + N L+D YAK G I A ++F+ + + ++VSW ++++G A HG+GK
Sbjct: 317 IKSGLKLIAF-IGNTLLDMYAKAGSIDDAKRVFDRLV--KPDVVSWNTMLTGCAQHGLGK 373
Query: 294 EAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCL 353
E ++ F +M ++G++PN ++FL VL ACSH GL++EGL +F+ ++++ +V PD+ HY
Sbjct: 374 ETLDRFEQMLRIGIEPNEISFLCVLTACSHSGLLDEGLYYFE-LMKKYKVEPDVPHYVTF 432
Query: 354 IDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGY 413
+D+LGR G L++AE+ +P E T VW LLGAC H N+E+G + E++
Sbjct: 433 VDLLGRVGLLDRAERFIREMPIEPT-AAVWGALLGACRMHKNMELGVYAAERAFELDPHD 491
Query: 414 GGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
G +L+ NI A GR+ D ++R++M E K P CS V
Sbjct: 492 SGPRMLLSNIYASAGRWRDVAKVRKMMKESGVKKQPACSWV 532
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 99/200 (49%), Gaps = 26/200 (13%)
Query: 221 GDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWT 280
G V+ +++H + F + + N +++ YAKCGC+ A ++F+++ K++V+WT
Sbjct: 101 GKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCGCLDDARRMFDEMPT--KDMVTWT 158
Query: 281 SIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEE 340
++I+GF+ + ++A+ F +M ++G +PN T S+L A E GL+ ++
Sbjct: 159 ALIAGFSQNNRPRDALLLFPQMLRLGFQPNHFTLSSLLKASGS----EHGLDPGTQLHAF 214
Query: 341 CEVLPDIKHYG---------CLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACS 391
C YG L+DM R G ++ A+ G+P++ V W L+ S
Sbjct: 215 C------LKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSE--VSWNALI---S 263
Query: 392 FHGNVEMGERVTRKILEMER 411
H GE + +M+R
Sbjct: 264 GHARKGEGEHALHLLWKMQR 283
>gi|334188141|ref|NP_199060.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170829|sp|Q9FIH2.1|PP414_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g42450, mitochondrial; Flags: Precursor
gi|9759481|dbj|BAB10486.1| unnamed protein product [Arabidopsis thaliana]
gi|332007429|gb|AED94812.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 517
Score = 238 bits (607), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 134/385 (34%), Positives = 214/385 (55%), Gaps = 4/385 (1%)
Query: 73 DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLF 132
+ FT+ +I + T LG QLH K+G S+V+V +A++N YV L L D+ + F
Sbjct: 92 NEFTFGTVIGSSTTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCF 151
Query: 133 DEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALA 192
D+ + N+V+ +I+G +K E E A SLF MP R+VV+W +I G+++ R+ EA+
Sbjct: 152 DDTRDPNVVSITNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVN 211
Query: 193 LFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDT 252
F M+ P+E T + AI + + IH K F++ V N LI
Sbjct: 212 TFVDMLREGVVIPNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISF 271
Query: 253 YAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQK-VGLKPNR 311
Y+KCG + + F + E++N+VSW S+I G+A +G G+EAV F +M K L+PN
Sbjct: 272 YSKCGNMEDSLLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNN 331
Query: 312 VTFLSVLNACSHGGLVEEGLNFFDKMVEECEV--LPDIKHYGCLIDMLGRAGRLEQAEKT 369
VT L VL AC+H GL++EG +F+K V + + L +++HY C++DML R+GR ++AE+
Sbjct: 332 VTILGVLFACNHAGLIQEGYMYFNKAVNDYDDPNLLELEHYACMVDMLSRSGRFKEAEEL 391
Query: 370 ALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGR 429
+P + + W+ LLG C H N + + KILE++ YV++ N + +
Sbjct: 392 IKSMPLD-PGIGFWKALLGGCQIHSNKRLAKLAASKILELDPRDVSSYVMLSNAYSAMEN 450
Query: 430 FGDAERLRRVMDERNAFKVPGCSLV 454
+ + +RR M E + GCS +
Sbjct: 451 WQNVSLIRRKMKETGLKRFTGCSWI 475
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 124/258 (48%), Gaps = 15/258 (5%)
Query: 159 ARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIW 218
A +F+E+P +V+S T +I + + +R EA F++++ C P+E T V+ +
Sbjct: 46 AHKVFDEIPELDVISATAVIGRFVKESRHVEASQAFKRLL-CLGIRPNEFTFGTVIGSST 104
Query: 219 QNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVS 278
+ DVK + +H Y K G A ++ V + +++ Y K + A + F+D N+VS
Sbjct: 105 TSRDVKLGKQLHCYALKMGL-ASNVFVGSAVLNCYVKLSTLTDARRCFDD--TRDPNVVS 161
Query: 279 WTSIISGFAMHGMGKEAVENFGRMQKVGLKPNR--VTFLSVLNACSHGGLVEEGLNFFDK 336
T++ISG+ +EA+ F M P R VT+ +V+ S G EE +N F
Sbjct: 162 ITNLISGYLKKHEFEEALSLFRAM------PERSVVTWNAVIGGFSQTGRNEEAVNTFVD 215
Query: 337 MVEECEVLPDIKHYGCLIDMLGRA---GRLEQAEKTALGIPSEITDVVVWRTLLGACSFH 393
M+ E V+P+ + C I + G + A+ + +V VW +L+ S
Sbjct: 216 MLREGVVIPNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYSKC 275
Query: 394 GNVEMGERVTRKILEMER 411
GN+E K+ E +R
Sbjct: 276 GNMEDSLLAFNKLEEEQR 293
>gi|242081563|ref|XP_002445550.1| hypothetical protein SORBIDRAFT_07g021340 [Sorghum bicolor]
gi|241941900|gb|EES15045.1| hypothetical protein SORBIDRAFT_07g021340 [Sorghum bicolor]
Length = 595
Score = 238 bits (607), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 139/446 (31%), Positives = 227/446 (50%), Gaps = 49/446 (10%)
Query: 10 PNNITTQIHSHLLTTNSLLHHSQLFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLP 69
P++ + H LT S L + N++L S P A ++++ +
Sbjct: 69 PSHRALAVLDHHLTAASSLPSTFQCNSILRVLS---DPSDALRFLRRMRALGRRG----- 120
Query: 70 PLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSS 129
++FT + L++ L+H QLHA + G + T+L+ Y + G
Sbjct: 121 ---NAFTLAILLKPRCALAH---ARQLHANVVAEGHLRDALLATSLMACYANRG------ 168
Query: 130 KLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNE 189
+ + AR LF EMP R+ V+W +I R R+ +
Sbjct: 169 -------------------------DGDGARKLFGEMPARDAVAWNVLISCCARNRRTKD 203
Query: 190 ALALFRKMVACEY-TEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNC 248
AL LF +M + EP ++T + +L A G + + + Y E+ G+ A ++V N
Sbjct: 204 ALKLFEEMRGRDSGAEPDDVTCILLLQACTSLGALDFGEQVWAYAEEHGYGA-KLKVRNS 262
Query: 249 LIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLK 308
LI Y++CGC+ A ++F +K++V+W+++ISG A +G G +A+ F M + +
Sbjct: 263 LIAMYSRCGCVDKAYRVF--CGTPQKSVVTWSAMISGLAANGFGDDAISAFEEMIRSDVA 320
Query: 309 PNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEK 368
P+ TF VL+ACSH GLV+EG FFD M E + P+++HYGC++D++GRAG L++A +
Sbjct: 321 PDEQTFTGVLSACSHSGLVDEGFRFFDMMRCEYGLKPNVRHYGCIVDLMGRAGLLDEAYE 380
Query: 369 TALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVG 428
D +WRTLLGAC HG+V++GERV ++E++ GDYVL+ N A VG
Sbjct: 381 LVTNEMKVAPDATIWRTLLGACRIHGHVDLGERVISNLIELKAQQAGDYVLLLNTYAAVG 440
Query: 429 RFGDAERLRRVMDERNAFKVPGCSLV 454
+ +R++M E+ PGC+ V
Sbjct: 441 EWSKVSEVRKLMQEKGIQTTPGCTTV 466
>gi|224089505|ref|XP_002308737.1| predicted protein [Populus trichocarpa]
gi|222854713|gb|EEE92260.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 238 bits (607), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 146/427 (34%), Positives = 234/427 (54%), Gaps = 55/427 (12%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNL- 92
+ L+ YS + PQ A LL ++ +I L P + FT + L++ + + ++
Sbjct: 84 WTALITGYSQHDRPQDALLLLPEMLRI------GLKP--NQFTLASLLKAASGVGSTDVL 135
Query: 93 -GTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLV 151
G QLH + + G+ S+VYV+ A+++MY L+++ +FD VM++
Sbjct: 136 QGRQLHGLCLRYGYDSNVYVSCAILDMYARCHHLEEAQLIFD-----------VMVS--- 181
Query: 152 KWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITIL 211
+N VSW +I GY R + ++A LF M+ E +P+ T
Sbjct: 182 -----------------KNEVSWNALIAGYARKGQGDKAFCLFSNMLR-ENVKPTHFTYS 223
Query: 212 AVLPAIWQNGDVKSCQLIHG----YGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFE 267
+VL A G ++ + +H +GEK AF V N L+D YAK G I A K+F+
Sbjct: 224 SVLCACASMGSLEQGKWVHALMIKWGEK--LVAF---VGNTLLDMYAKSGSIEDAKKVFD 278
Query: 268 DISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLV 327
++ ++++VSW S+++G++ HG+GK A++ F M + + PN +TFL VL ACSH GL+
Sbjct: 279 RLA--KRDVVSWNSMLTGYSQHGLGKVALQRFEEMLRTRIAPNDITFLCVLTACSHAGLL 336
Query: 328 EEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLL 387
+EG ++FD M+++ V P I HY ++D+LGRAG L++A + +P + T VW LL
Sbjct: 337 DEGRHYFD-MMKKYNVEPQISHYVTMVDLLGRAGHLDRAIQFISEMPIKPT-AAVWGALL 394
Query: 388 GACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFK 447
GAC H N+E+G I E++ Y G +VL+YNI A GR+ DA ++R++M E K
Sbjct: 395 GACRMHKNMELGGYAAECIFELDSHYPGTHVLLYNIYALAGRWNDAAKVRKMMKESGVKK 454
Query: 448 VPGCSLV 454
P CS V
Sbjct: 455 EPACSWV 461
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 99/335 (29%), Positives = 167/335 (49%), Gaps = 45/335 (13%)
Query: 80 LIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERN 139
L++ C L+ N G +HA++ F+ + + L+N+Y
Sbjct: 21 LLKRCTHLNKLNEGKIIHALLLNSRFRDDLVMQNTLLNLYA------------------- 61
Query: 140 LVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVA 199
K G+L +AR LF+EM R+VV+WT +I GY++ +R +AL L +M+
Sbjct: 62 ------------KCGDLVYARKLFDEMSSRDVVTWTALITGYSQHDRPQDALLLLPEMLR 109
Query: 200 CEYTEPSEITILAVLPAIWQNG--DVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCG 257
+P++ T+ ++L A G DV + +HG + G+ + ++ V ++D YA+C
Sbjct: 110 IG-LKPNQFTLASLLKAASGVGSTDVLQGRQLHGLCLRYGYDS-NVYVSCAILDMYARCH 167
Query: 258 CIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSV 317
+ A +F D+ V KN VSW ++I+G+A G G +A F M + +KP T+ SV
Sbjct: 168 HLEEAQLIF-DVMVS-KNEVSWNALIAGYARKGQGDKAFCLFSNMLRENVKPTHFTYSSV 225
Query: 318 LNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYG-CLIDMLGRAGRLEQAEKTALGIPSE 376
L AC+ G +E+G M++ E L + G L+DM ++G +E A+K +
Sbjct: 226 LCACASMGSLEQGKWVHALMIKWGEKL--VAFVGNTLLDMYAKSGSIEDAKKVFDRLAKR 283
Query: 377 ITDVVVWRTLLGACSFHGNVEMGERVTRKILEMER 411
DVV W ++L S HG +G+ ++ EM R
Sbjct: 284 --DVVSWNSMLTGYSQHG---LGKVALQRFEEMLR 313
>gi|224088569|ref|XP_002308477.1| predicted protein [Populus trichocarpa]
gi|222854453|gb|EEE92000.1| predicted protein [Populus trichocarpa]
Length = 504
Score = 238 bits (607), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 129/387 (33%), Positives = 218/387 (56%), Gaps = 15/387 (3%)
Query: 73 DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLF 132
+ FT+ +I + +L NLG Q A K+G V+V +A+++ Y LG ++++ + F
Sbjct: 92 NEFTFGTVIHSSTSLGDLNLGRQFQACAMKMGLNYMVFVGSAVLDSYAKLGSIQEAQRAF 151
Query: 133 DEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALA 192
+++ N+V++ +I G +K G E A LF++MP RN+V+W +I G+++M ++ EA+
Sbjct: 152 EDIQHPNIVSYTALIHGYLKKGRFEEAFELFKQMPERNIVTWNAMIGGFSQMGQNEEAVN 211
Query: 193 LFRKM-----VACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLN 247
LF +M V C+YT P I A + A+ +C I GE F + V N
Sbjct: 212 LFVEMIREGLVPCQYTFPCAIIAAANIAALEMGRSFHACA-IKTMGE------FSVFVGN 264
Query: 248 CLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGL 307
LI YAKCG + + +LF ++ + +VSW ++I GFA +G G+ AV+ + RM+ GL
Sbjct: 265 SLISFYAKCGSMEDSLRLFYELP--ERTIVSWNAVICGFAQNGRGENAVDFYERMRNTGL 322
Query: 308 KPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAE 367
+P+ VT L +L AC+H GLV++G ++F++ E L KHY C++D+L R G ++A+
Sbjct: 323 RPDSVTLLGLLWACNHAGLVDKGYSYFNRARLEHPSLLKPKHYACMVDLLSRCGCFKEAQ 382
Query: 368 KTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGV 427
+ +P V W+ LLG C H N E+G R IL+++ Y+++ N +
Sbjct: 383 EFLRDLPFN-PGVGFWKALLGGCKIHSNTELGALAGRNILDLDPKDASSYIMLSNAHSAA 441
Query: 428 GRFGDAERLRRVMDERNAFKVPGCSLV 454
GR+ DA +R+ + R ++P S +
Sbjct: 442 GRWQDASVIRQEIHARGLKRIPASSWI 468
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 98/182 (53%), Gaps = 8/182 (4%)
Query: 159 ARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIW 218
A +F+ +P +VVS T II + R+++ EA+ LF +M+ T P+E T V+ +
Sbjct: 46 ALQVFDTIPDLDVVSATTIIGQFARLHQYREAIQLFSRMLFLNVT-PNEFTFGTVIHSST 104
Query: 219 QNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVS 278
GD+ + K G + + V + ++D+YAK G I A + FEDI + N+VS
Sbjct: 105 SLGDLNLGRQFQACAMKMGLN-YMVFVGSAVLDSYAKLGSIQEAQRAFEDI--QHPNIVS 161
Query: 279 WTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMV 338
+T++I G+ G +EA E F +M + N VT+ +++ S G EE +N F +M+
Sbjct: 162 YTALIHGYLKKGRFEEAFELFKQMP----ERNIVTWNAMIGGFSQMGQNEEAVNLFVEMI 217
Query: 339 EE 340
E
Sbjct: 218 RE 219
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 72/170 (42%), Gaps = 32/170 (18%)
Query: 258 CIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSV 317
C FS + L ++ ++VS T+II FA +EA++ F RM + + PN TF +V
Sbjct: 40 CHFSRNALQVFDTIPDLDVVSATTIIGQFARLHQYREAIQLFSRMLFLNVTPNEFTFGTV 99
Query: 318 LNACSHGG-----------LVEEGLNF--------------FDKMVEECEVLPDIKH--- 349
+++ + G ++ GLN+ + E DI+H
Sbjct: 100 IHSSTSLGDLNLGRQFQACAMKMGLNYMVFVGSAVLDSYAKLGSIQEAQRAFEDIQHPNI 159
Query: 350 --YGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVE 397
Y LI + GR E+A + +P ++V W ++G S G E
Sbjct: 160 VSYTALIHGYLKKGRFEEAFELFKQMPER--NIVTWNAMIGGFSQMGQNE 207
>gi|414587344|tpg|DAA37915.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
gi|414587345|tpg|DAA37916.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
Length = 920
Score = 238 bits (607), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 150/494 (30%), Positives = 241/494 (48%), Gaps = 87/494 (17%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNL 92
L+N +L Y K+F ++ Q+Q H + FTY ++RTC L
Sbjct: 313 LWNLMLVAYGQISDLAKSFEIFGQMQATGIHP--------NQFTYPCILRTCTCTGQIEL 364
Query: 93 GTQLHAVISKVGFQSHVYVNTALVNM-------------------------------YVS 121
G Q+H++ K GF+S +YV+ L++M YV
Sbjct: 365 GEQIHSLSIKNGFESDMYVSGVLIDMYSKYGCLDKARKILEMLEKRDVVSWTSMIAGYVQ 424
Query: 122 LGFLKDSSKLFDEMPE---------------------------------------RNLVT 142
F +++ F EM + ++
Sbjct: 425 HDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQIHARVYVSGYAADISI 484
Query: 143 WNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKM--VAC 200
WN ++ + G E A SLF E+ ++ ++W G+I G+ + +AL +F KM
Sbjct: 485 WNTLVNLYARCGRSEEAFSLFREIEHKDEITWNGLISGFGQSRLYKQALMVFMKMGQAGA 544
Query: 201 EYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIF 260
+Y + T ++ + A+ D+K + +HG K G T+ + V N LI Y KCG I
Sbjct: 545 KY---NVFTFISAISALANLADIKQGKQVHGRAVKTGHTS-ETEVANALISLYGKCGSIE 600
Query: 261 SASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNA 320
A +F ++S+ +N VSW +II+ + HG G EA++ F +M++ GLKPN VTF+ VL A
Sbjct: 601 DAKMIFSEMSL--RNEVSWNTIITSCSQHGRGLEALDLFDQMKQEGLKPNDVTFIGVLAA 658
Query: 321 CSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDV 380
CSH GLVEEGL++F M + P HY C++D+LGRAG+L++A + +P +
Sbjct: 659 CSHVGLVEEGLSYFKSMSNVYGLNPIPDHYACVVDILGRAGQLDRARRFVDEMPI-TANA 717
Query: 381 VVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVM 440
++WRTLL AC H N+E+GE + +LE+E YVL+ N A G++ + +++R++M
Sbjct: 718 MIWRTLLSACKVHKNIEIGELAAKHLLELEPHDSASYVLLSNAYAVTGKWANRDQVRKMM 777
Query: 441 DERNAFKVPGCSLV 454
+R K PG S +
Sbjct: 778 KDRGIRKEPGRSWI 791
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 92/354 (25%), Positives = 159/354 (44%), Gaps = 46/354 (12%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
FNTL+ ++ + A ++ ++Q S L P D T + L+ CA++ G
Sbjct: 213 FNTLISGHAQCGHGECALQIFDEMQL------SGLRP--DCVTVASLLAACASVGDLQKG 264
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
QLH+ + K G +L+++YV K
Sbjct: 265 KQLHSYLLKAGMSFDYITEGSLLDLYV-------------------------------KC 293
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
G++E A +F NVV W ++ Y +++ ++ +F +M A P++ T +
Sbjct: 294 GDIETAHDIFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATG-IHPNQFTYPCI 352
Query: 214 LPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVER 273
L G ++ + IH K GF + D+ V LID Y+K GC+ A K+ E +E+
Sbjct: 353 LRTCTCTGQIELGEQIHSLSIKNGFES-DMYVSGVLIDMYSKYGCLDKARKILE--MLEK 409
Query: 274 KNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNF 333
+++VSWTS+I+G+ H +EA+ F MQ G+ P+ + S +AC+ + +GL
Sbjct: 410 RDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQI 469
Query: 334 FDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLL 387
+ V DI + L+++ R GR E+A +L E D + W L+
Sbjct: 470 HAR-VYVSGYAADISIWNTLVNLYARCGRSEEA--FSLFREIEHKDEITWNGLI 520
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 90/354 (25%), Positives = 155/354 (43%), Gaps = 46/354 (12%)
Query: 36 TLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLGTQ 95
+L Y+ + ++AF LY Q+ H + +P + S ++ C G
Sbjct: 114 AMLSGYAQSGLGKEAFRLYSQM-----HWTAVIPT---PYVLSSVLSACTKGKLFAQGRM 165
Query: 96 LHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGE 155
+HA + K F S +V AL+ +Y+ G K + ++F +M + VT+N +I+G + G
Sbjct: 166 IHAQVYKQAFCSETFVGNALIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGH 225
Query: 156 LEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLP 215
E A +F+EM + P +T+ ++L
Sbjct: 226 GECALQIFDEMQLSGL--------------------------------RPDCVTVASLLA 253
Query: 216 AIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKN 275
A GD++ + +H Y K G + FD L+D Y KCG I +A +F +R N
Sbjct: 254 ACASVGDLQKGKQLHSYLLKAGMS-FDYITEGSLLDLYVKCGDIETAHDIFN--LGDRTN 310
Query: 276 LVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFD 335
+V W ++ + ++ E FG+MQ G+ PN+ T+ +L C+ G +E G
Sbjct: 311 VVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNQFTYPCILRTCTCTGQIELGEQIHS 370
Query: 336 KMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGA 389
++ D+ G LIDM + G L++A K + E DVV W +++
Sbjct: 371 LSIKN-GFESDMYVSGVLIDMYSKYGCLDKARKILEML--EKRDVVSWTSMIAG 421
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 83/336 (24%), Positives = 153/336 (45%), Gaps = 50/336 (14%)
Query: 144 NVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYT 203
N++I K G + AR +F+E+ R+ VSW ++ GY + EA L+ +M +T
Sbjct: 82 NLLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQSGLGKEAFRLYSQM---HWT 138
Query: 204 E--PSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFS 261
P+ + +VL A + ++IH K+ F + + V N LI Y G
Sbjct: 139 AVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCS-ETFVGNALIALYLGFGSFKL 197
Query: 262 ASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNAC 321
A ++F D+ + V++ ++ISG A G G+ A++ F MQ GL+P+ VT S+L AC
Sbjct: 198 AERVFCDMLFCDR--VTFNTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLLAAC 255
Query: 322 SHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKT-ALGIPSEITDV 380
+ G +++G +++ I G L+D+ + G +E A LG + T+V
Sbjct: 256 ASVGDLQKGKQLHSYLLKAGMSFDYITE-GSLLDLYVKCGDIETAHDIFNLG---DRTNV 311
Query: 381 VVWRTLLGA-----------------------------------CSFHGNVEMGERVTRK 405
V+W +L A C+ G +E+GE++
Sbjct: 312 VLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNQFTYPCILRTCTCTGQIELGEQIHS- 370
Query: 406 ILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMD 441
L ++ G+ D + ++ ++G ++ R++++
Sbjct: 371 -LSIKNGFESDMYVSGVLIDMYSKYGCLDKARKILE 405
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 100/212 (47%), Gaps = 10/212 (4%)
Query: 229 IHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAM 288
IH RG A D + N LID YAK G ++ A ++F+++S ++ VSW +++SG+A
Sbjct: 65 IHATSVVRGLGA-DRLIGNLLIDLYAKNGLVWQARQVFKELS--SRDHVSWVAMLSGYAQ 121
Query: 289 HGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIK 348
G+GKEA + +M + P SVL+AC+ G L +G V + +
Sbjct: 122 SGLGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQG-RMIHAQVYKQAFCSETF 180
Query: 349 HYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILE 408
LI + G + AE+ + D V + TL+ S H GE + E
Sbjct: 181 VGNALIALYLGFGSFKLAERVFCDML--FCDRVTFNTLI---SGHAQCGHGECALQIFDE 235
Query: 409 ME-RGYGGDYVLMYNILAGVGRFGDAERLRRV 439
M+ G D V + ++LA GD ++ +++
Sbjct: 236 MQLSGLRPDCVTVASLLAACASVGDLQKGKQL 267
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 95/209 (45%), Gaps = 28/209 (13%)
Query: 16 QIHSHLLTTNSLLHHSQLFNTLLHFYSLAESPQKAFLLYKQLQ----------------- 58
QIH+ + + S ++NTL++ Y+ ++AF L+++++
Sbjct: 468 QIHARVYVSGYAADIS-IWNTLVNLYARCGRSEEAFSLFREIEHKDEITWNGLISGFGQS 526
Query: 59 QIYTHSHSPLPPL------FDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVN 112
++Y + + ++ FT+ I A L+ G Q+H K G S V
Sbjct: 527 RLYKQALMVFMKMGQAGAKYNVFTFISAISALANLADIKQGKQVHGRAVKTGHTSETEVA 586
Query: 113 TALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCR--- 169
AL+++Y G ++D+ +F EM RN V+WN +IT + G A LF++M
Sbjct: 587 NALISLYGKCGSIEDAKMIFSEMSLRNEVSWNTIITSCSQHGRGLEALDLFDQMKQEGLK 646
Query: 170 -NVVSWTGIIDGYTRMNRSNEALALFRKM 197
N V++ G++ + + E L+ F+ M
Sbjct: 647 PNDVTFIGVLAACSHVGLVEEGLSYFKSM 675
>gi|357519003|ref|XP_003629790.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523812|gb|AET04266.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 908
Score = 238 bits (607), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 131/382 (34%), Positives = 208/382 (54%), Gaps = 37/382 (9%)
Query: 73 DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLF 132
D +T + ++ CA S + G +H+ + K G S++ V AL+NMY
Sbjct: 396 DIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYA------------ 443
Query: 133 DEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALA 192
K G +E AR +F ++P +++VSW +I GY++ NEAL
Sbjct: 444 -------------------KCGSVEEARLVFSKIPVKDIVSWNTMIGGYSQNLLPNEALE 484
Query: 193 LFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDT 252
LF M + +P +IT+ VLPA + + IHG+ +RG+ + D+ V L+D
Sbjct: 485 LFLDMQ--KQFKPDDITMACVLPACAGLAALDKGREIHGHILRRGYFS-DLHVACALVDM 541
Query: 253 YAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRV 312
YAKCG + A LF+ I +K+L+SWT +I+G+ MHG G EA+ F M+ G++P+
Sbjct: 542 YAKCGLLVLAQLLFDMIP--KKDLISWTVMIAGYGMHGFGNEAISTFNEMRIAGIEPDES 599
Query: 313 TFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALG 372
+F ++LNACSH GL+ EG FF+ M EC V P ++HY C++D+L R G L +A K
Sbjct: 600 SFSAILNACSHSGLLNEGWKFFNSMRNECGVEPKLEHYACVVDLLARMGNLSKAYKFIES 659
Query: 373 IPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGD 432
+P + D +W LL C H +V++ E+V I E+E YV++ N+ A ++ +
Sbjct: 660 MPIK-PDTTIWGVLLSGCRIHHDVKLAEKVAEHIFELEPDNTRYYVVLANVYAEAEKWEE 718
Query: 433 AERLRRVMDERNAFKVPGCSLV 454
++LR+ M +R + PGCS +
Sbjct: 719 VKKLRKRMQKRGFKQNPGCSWI 740
Score = 127 bits (320), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 97/407 (23%), Positives = 198/407 (48%), Gaps = 49/407 (12%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNL 92
L+N L+ Y+ + +++ L+K++Q+ L + + +T++ +++ A L
Sbjct: 162 LWNLLMSEYAKIGNFRESVSLFKKMQK--------LGVVGNCYTFTCVLKCFAALGKVKE 213
Query: 93 GTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVK 152
++H + K+GF S+ V +L+ Y G ++ + LFDE+ E ++V+WN MI G V
Sbjct: 214 CKRVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCV- 272
Query: 153 WGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILA 212
++G+ S L +F +M+ E T+++
Sbjct: 273 -------------------------VNGF-----SGNGLEIFIQMLILG-VEVDLTTLVS 301
Query: 213 VLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVE 272
VL A G++ + +HG+G K F+ ++ N L+D Y+KCG + A+++F + +
Sbjct: 302 VLVACANIGNLSLGRALHGFGVKACFSE-EVVFSNTLLDMYSKCGNLNGATEVF--VKMG 358
Query: 273 RKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLN 332
+VSWTSII+ + G+ +A+ F MQ G++P+ T S+++AC+ +++G +
Sbjct: 359 DTTIVSWTSIIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLDKGRD 418
Query: 333 FFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSF 392
+++ + ++ LI+M + G +E+A IP + D+V W T++G +
Sbjct: 419 VHSYVIKN-GMGSNLPVTNALINMYAKCGSVEEARLVFSKIP--VKDIVSWNTMIGG--Y 473
Query: 393 HGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRV 439
N+ E + L+M++ + D + M +L ++ R +
Sbjct: 474 SQNLLPNEAL-ELFLDMQKQFKPDDITMACVLPACAGLAALDKGREI 519
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 85/314 (27%), Positives = 142/314 (45%), Gaps = 38/314 (12%)
Query: 76 TYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEM 135
+Y +++ CA G ++H+VI G + LV MYV+ G L K+FD++
Sbjct: 96 SYCSVLQLCAEKKSLEDGKRVHSVIISNGISVDEALGAKLVFMYVNCGDLVQGRKIFDKI 155
Query: 136 PERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFR 195
+ WN++++ K G + SLF++M VV
Sbjct: 156 MNDKVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVG---------------------- 193
Query: 196 KMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAK 255
+ T VL G VK C+ +HGY K GF + + V+N LI Y K
Sbjct: 194 ----------NCYTFTCVLKCFAALGKVKECKRVHGYVLKLGFGS-NTAVVNSLIAAYFK 242
Query: 256 CGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFL 315
G + SA LF+++S ++VSW S+I+G ++G +E F +M +G++ + T +
Sbjct: 243 FGGVESAHNLFDELS--EPDVVSWNSMINGCVVNGFSGNGLEIFIQMLILGVEVDLTTLV 300
Query: 316 SVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPS 375
SVL AC++ G + G V+ C ++ L+DM + G L A T + +
Sbjct: 301 SVLVACANIGNLSLGRALHGFGVKAC-FSEEVVFSNTLLDMYSKCGNLNGA--TEVFVKM 357
Query: 376 EITDVVVWRTLLGA 389
T +V W +++ A
Sbjct: 358 GDTTIVSWTSIIAA 371
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 125/283 (44%), Gaps = 20/283 (7%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+NT++ YS P +A L+ +Q+ + D T + ++ CA L+ + G
Sbjct: 466 WNTMIGGYSQNLLPNEALELFLDMQKQFKP---------DDITMACVLPACAGLAALDKG 516
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
++H I + G+ S ++V ALV+MY G L + LFD +P+++L++W VMI G
Sbjct: 517 REIHGHILRRGYFSDLHVACALVDMYAKCGLLVLAQLLFDMIPKKDLISWTVMIAGYGMH 576
Query: 154 GELEFARSLFEEMPCRNV----VSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEIT 209
G A S F EM + S++ I++ + NE F M EP
Sbjct: 577 GFGNEAISTFNEMRIAGIEPDESSFSAILNACSHSGLLNEGWKFFNSMRNECGVEPKLEH 636
Query: 210 ILAVLPAIWQNGDV-KSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFED 268
V+ + + G++ K+ + I K T + + + C I K A K+ E
Sbjct: 637 YACVVDLLARMGNLSKAYKFIESMPIKPDTTIWGVLLSGCRIHHDVKL-----AEKVAEH 691
Query: 269 I-SVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPN 310
I +E N + + + +A +E + RMQK G K N
Sbjct: 692 IFELEPDNTRYYVVLANVYAEAEKWEEVKKLRKRMQKRGFKQN 734
>gi|357130868|ref|XP_003567066.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g77170-like [Brachypodium distachyon]
Length = 433
Score = 238 bits (606), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 141/425 (33%), Positives = 222/425 (52%), Gaps = 48/425 (11%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHP--N 91
+N L Y S + A + + + H D +T+ ++ A P +
Sbjct: 52 WNALTRAYLRHGSSRSALCVAAHMFRCAAHP--------DRYTFPLALKAAAQGEPPISS 103
Query: 92 LGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLV 151
L Q HA +K G H + +AL++ Y G L + ++FDE P R L +WN +I+GL
Sbjct: 104 LRRQFHAAAAKRGLARHPFTESALISCYSKAGDLDAARRVFDENPHRGLGSWNAIISGLS 163
Query: 152 KWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITIL 211
+ GE S E LALF KM C P ++T++
Sbjct: 164 QAGE-------------------------------SKEPLALFVKMRRCGVV-PDDLTMV 191
Query: 212 AVLPAIWQNGDVKSCQLIHG-YGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDIS 270
+++ + GD+ + +H + + + D+ + N LID YAKCG A ++FE +
Sbjct: 192 SLVSSCCAVGDIGLVEQLHKCMLQCKHSSRLDVTLSNALIDMYAKCGRTDLAGRVFERMP 251
Query: 271 VERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEG 330
+ +++ SWT++I+G A HG + A++ F M+ G+ PNRVT L+VL+AC+H GLV+ G
Sbjct: 252 L--RDVSSWTTMITGLATHGEEQRALKKFDEMKSEGVPPNRVTMLAVLSACAHRGLVDTG 309
Query: 331 LNFFDKMVE-ECEVLPDIKHYGCLIDMLGRAGRLEQAEK-TALGIPSEITDVVVWRTLLG 388
+ +M + E +V P ++HYGCL+D+LGR G ++ A +P E +VV+W TLLG
Sbjct: 310 MGLLKQMEDGEIKVAPTVEHYGCLVDLLGRVGWVDDARALVEHRMPME-ANVVIWGTLLG 368
Query: 389 ACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKV 448
AC HGNV +GE ++ E E G YV++ N+ A G +G+ ER+R++M R K
Sbjct: 369 ACEKHGNVSVGEWAAERLQEAEPWNDGVYVVLSNVYAAAGMWGEVERVRKMMSGRKVTKF 428
Query: 449 PGCSL 453
PGCSL
Sbjct: 429 PGCSL 433
>gi|297821407|ref|XP_002878586.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324425|gb|EFH54845.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 786
Score = 238 bits (606), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 133/391 (34%), Positives = 220/391 (56%), Gaps = 8/391 (2%)
Query: 66 SPLPPLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFL 125
S L P D FT + ++ CA L +G Q+H+ I GF V AL++MY G +
Sbjct: 273 SMLSP--DRFTLASVLSACANLEKLCIGEQIHSHIVTTGFDISGIVLNALISMYSRCGGV 330
Query: 126 KDSSKLFDEMPERNLVT--WNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTR 183
+ + +L ++ ++L + ++ G +K G++ A+++F+ + R+VV+WT +I GY +
Sbjct: 331 ETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNEAKNIFDSLKDRDVVAWTAMIVGYEQ 390
Query: 184 MNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDI 243
EA+ LFR MV E P+ T+ A+L + + IHG K G + +
Sbjct: 391 HGLYGEAINLFRSMVG-EEQRPNSYTLAAMLSVASSLASLGHGKQIHGSAVKSG-EIYSV 448
Query: 244 RVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQ 303
V N LI YAK G I SAS+ F+ I ER + VSWTS+I A HG +EA+E F M
Sbjct: 449 SVSNALITMYAKAGSITSASRAFDLIRCER-DTVSWTSMIIALAQHGHAEEALELFETML 507
Query: 304 KVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRL 363
GL+P+ +T++ V +AC+H GLV +G +FD M + +++P + HY C++D+ GRAG L
Sbjct: 508 MEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLL 567
Query: 364 EQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNI 423
++A++ +P E DVV W +LL AC + N+++G+ ++L +E G Y + N+
Sbjct: 568 QEAQEFIEKMPIE-PDVVTWGSLLSACRVYKNIDLGKVAAERLLLLEPENSGAYSALANL 626
Query: 424 LAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
+ G++ +A ++R+ M + K G S +
Sbjct: 627 YSACGKWEEAAKIRKSMKDGRVKKEQGFSWI 657
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 95/354 (26%), Positives = 165/354 (46%), Gaps = 34/354 (9%)
Query: 75 FTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDE 134
FT + ++ + A G ++H+ I K+G + +V V+ +L+NMY G + +FD
Sbjct: 147 FTLTNVLASVAATRCLETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKVVFDR 206
Query: 135 MPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALF 194
M +++ +WN MI ++ G+++ A + FE+M R++V+W +I GY + AL +F
Sbjct: 207 MVVKDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGYNQRGYDLRALDMF 266
Query: 195 RKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYA 254
KM+ P T+ +VL A + + IH + GF I VLN LI Y+
Sbjct: 267 SKMLRDSMLSPDRFTLASVLSACANLEKLCIGEQIHSHIVTTGFDISGI-VLNALISMYS 325
Query: 255 KCGCIFSASKLFE-----DISVE--------------------------RKNLVSWTSII 283
+CG + +A +L E D+ +E +++V+WT++I
Sbjct: 326 RCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNEAKNIFDSLKDRDVVAWTAMI 385
Query: 284 SGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEV 343
G+ HG+ EA+ F M +PN T ++L+ S + G V+ E+
Sbjct: 386 VGYEQHGLYGEAINLFRSMVGEEQRPNSYTLAAMLSVASSLASLGHGKQIHGSAVKSGEI 445
Query: 344 LPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVE 397
+ LI M +AG + A + I E D V W +++ A + HG+ E
Sbjct: 446 YS-VSVSNALITMYAKAGSITSASRAFDLIRCE-RDTVSWTSMIIALAQHGHAE 497
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 84/296 (28%), Positives = 146/296 (49%), Gaps = 45/296 (15%)
Query: 66 SPLPPLFDSFTYSFLIRTCATL-------SHPNLGTQL-HAVISKVGFQSHVYVNTALVN 117
+P+P + S L+ C L S+ QL H + K G VY+ L+N
Sbjct: 3 APVP-----LSLSTLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLVFSVYLMNNLMN 57
Query: 118 MYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGI 177
+Y G+ + KLFDEMP R +WN +++ K G+++ + F+ +P R+ VSWT +
Sbjct: 58 VYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYAKRGDMDSSCEFFDRLPQRDSVSWTTM 117
Query: 178 IDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRG 237
I GY + + ++A+ + +M+ E EPS+ T+ VL ++ +++ + +H + K G
Sbjct: 118 IVGYKNIGQYHKAIRIMGEMMR-EGIEPSQFTLTNVLASVAATRCLETGKKVHSFIVKLG 176
Query: 238 FTAFDIRVLNCLIDTYAKCGCIFSASKLFE-----DIS---------------------- 270
++ V N L++ YAKCG A +F+ DIS
Sbjct: 177 LRG-NVSVSNSLLNMYAKCGDPMMAKVVFDRMVVKDISSWNAMIALHMQVGQMDLAMAQF 235
Query: 271 --VERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVG-LKPNRVTFLSVLNACSH 323
+ +++V+W S+ISG+ G A++ F +M + L P+R T SVL+AC++
Sbjct: 236 EQMAERDIVTWNSMISGYNQRGYDLRALDMFSKMLRDSMLSPDRFTLASVLSACAN 291
>gi|449462994|ref|XP_004149219.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
gi|449500964|ref|XP_004161240.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 624
Score = 238 bits (606), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 141/459 (30%), Positives = 235/459 (51%), Gaps = 62/459 (13%)
Query: 16 QIHSHLLTTNSLLHHSQLFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPL------- 68
Q+H+ + TN + + N LL+ Y + + A L+ + + + +S S +
Sbjct: 71 QVHAQI-ATNGAFRNLAVANKLLYMYVERGALEDAQELFDGMSKRHPYSWSVIVGGYAKV 129
Query: 69 -----------------PPLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYV 111
PL D ++ +IR C L G +H + K G +V
Sbjct: 130 GNFFSCFWMFRELLRSGAPL-DDYSAPVVIRACRDLKDLKCGRLIHCITLKCGLDYGHFV 188
Query: 112 NTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNV 171
LV+MY ++D+ ++F +M +R+L TW VMI L + G + F+ M + +
Sbjct: 189 CATLVDMYARCKVVEDAHQIFVKMWKRDLATWTVMIGALAESGVPVESLVFFDRMRNQGI 248
Query: 172 VSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHG 231
V P ++ ++ V+ A + G + + IH
Sbjct: 249 V--------------------------------PDKVALVTVVYACAKLGAMNKAKAIHA 276
Query: 232 YGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGM 291
Y G++ D+ + +ID YAKCG + SA +F+ + V +N+++W+++I+ + HG
Sbjct: 277 YINGTGYS-LDVILGTAMIDMYAKCGSVESARWIFDRMQV--RNVITWSAMIAAYGYHGQ 333
Query: 292 GKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYG 351
G++A+E F M + G+ PNR+TF+S+L ACSH GL+EEG FF M +E V PD+KHY
Sbjct: 334 GEKALELFPMMLRSGILPNRITFVSLLYACSHAGLIEEGQRFFSSMWDEYGVTPDVKHYT 393
Query: 352 CLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMER 411
C++D+LGRAGRL++A + G+P E D V+W LLGAC H ++++ ERV R +L+++
Sbjct: 394 CMVDLLGRAGRLDEALEMIEGMPVE-KDEVLWGALLGACRIHRHLDLAERVARSLLKLQS 452
Query: 412 GYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPG 450
G YVL+ NI A G++ D + R +M + K+PG
Sbjct: 453 QKPGHYVLLSNIYANAGKWEDMAKTRDLMTKGGLRKIPG 491
>gi|52076160|dbj|BAD46673.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 678
Score = 238 bits (606), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 139/424 (32%), Positives = 229/424 (54%), Gaps = 14/424 (3%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+NTLL +S + + ++ L+ Q+ S L D T L+ CA L P+ G
Sbjct: 224 WNTLLMGHSRSGNAKQCLALFNQMWM------SGL--TCDDATLCILVDACAELPDPSTG 275
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
+H V+ + G+ VN +L++ Y L + ++F+ M R +WN +I ++
Sbjct: 276 FAIHKVVVQSGWNGIPEVNNSLISFYTKFSLLDCAVQIFESMKTRTTASWNSLIDAHARF 335
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
G +E A LFE P N++SWT +I G+ R + ++EALA F KM+ EY +P + T AV
Sbjct: 336 GYIEQAALLFESAPETNIISWTAMIGGFARNSLTSEALAHFVKMLTQEYIQPDDFTFGAV 395
Query: 214 LPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVER 273
L A + S +++H + GF ++ + V N L+D YAKCG + A+ +F+ ++ +
Sbjct: 396 LHACASAPCLASGRMVHSCAFQGGFASY-LYVANNLVDMYAKCGDVEGANNVFD--AIHQ 452
Query: 274 KNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNF 333
K+LVSW +++ GFA++G+ KEA+E + M + P+ VTF +L ACSH GL+E+G F
Sbjct: 453 KDLVSWNTMLFGFAINGLPKEALEVYEIMTYHNVSPDEVTFTGLLTACSHSGLLEQGRAF 512
Query: 334 FDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITD--VVVWRTLLGACS 391
F+ M+ V P +H C++DM R+G + +A + P + + LL CS
Sbjct: 513 FESMMSVHGVQPKPEHLSCVLDMYARSGNIAKAIEMMEQYPEIVKSPGSGLSEALLSFCS 572
Query: 392 FHG-NVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPG 450
+ +G +V ++ YV++ N+L GR+ +AER+RR M E+ K PG
Sbjct: 573 SENLDFWVGRKVGDDVVARAPARDTGYVMLSNLLCASGRWDEAERVRRAMAEQGIKKSPG 632
Query: 451 CSLV 454
CS +
Sbjct: 633 CSWI 636
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 95/322 (29%), Positives = 153/322 (47%), Gaps = 51/322 (15%)
Query: 111 VNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRN 170
V ALV+MY D+++ F EMPERN ++W ++ V G +E A LF+EMP ++
Sbjct: 161 VGNALVSMYAKCARAADAARAFREMPERNALSWCSLLHAFVVSGHMELAHELFDEMPSKS 220
Query: 171 VVSWTGIIDGYTRMNRSNEALALFRKM----VACEYTE-----------PSEITILAVLP 215
V+W ++ G++R + + LALF +M + C+ P T A+
Sbjct: 221 NVAWNTLLMGHSRSGNAKQCLALFNQMWMSGLTCDDATLCILVDACAELPDPSTGFAIHK 280
Query: 216 AIWQNG-----DVKSCQLIHGYGEKRGFTAFDIRV-------------LNCLIDTYAKCG 257
+ Q+G +V + LI Y + F+ D V N LID +A+ G
Sbjct: 281 VVVQSGWNGIPEVNN-SLISFYTK---FSLLDCAVQIFESMKTRTTASWNSLIDAHARFG 336
Query: 258 CIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRM-QKVGLKPNRVTFLS 316
I A+ LFE S N++SWT++I GFA + + EA+ +F +M + ++P+ TF +
Sbjct: 337 YIEQAALLFE--SAPETNIISWTAMIGGFARNSLTSEALAHFVKMLTQEYIQPDDFTFGA 394
Query: 317 VLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHY----GCLIDMLGRAGRLEQAEKTALG 372
VL+AC+ + G +MV C Y L+DM + G +E A
Sbjct: 395 VLHACASAPCLASG-----RMVHSCAFQGGFASYLYVANNLVDMYAKCGDVEGANNVFDA 449
Query: 373 IPSEITDVVVWRTLLGACSFHG 394
I + D+V W T+L + +G
Sbjct: 450 IHQK--DLVSWNTMLFGFAING 469
>gi|242087005|ref|XP_002439335.1| hypothetical protein SORBIDRAFT_09g004560 [Sorghum bicolor]
gi|241944620|gb|EES17765.1| hypothetical protein SORBIDRAFT_09g004560 [Sorghum bicolor]
Length = 886
Score = 238 bits (606), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 127/319 (39%), Positives = 191/319 (59%), Gaps = 7/319 (2%)
Query: 140 LVTWNVMITGLVKWGELEFARSLFEEMPCR--NVVSWTGIIDGYTRMNRSNEALALFRKM 197
LV N +I K + AR++F +P R NVV+WT +I GY + SN+AL LF +M
Sbjct: 442 LVVHNALIDMYSKCRSFKAARTIFNSIPRRERNVVTWTVMIGGYAQYGDSNDALKLFSEM 501
Query: 198 VACEYT-EPSEITILAVLPAIWQNGDVKSCQLIHGYGEKR-GFTAFDIRVLNCLIDTYAK 255
++ Y P+ TI +L A ++ + IH Y + + + V NCLID Y+K
Sbjct: 502 ISKPYAVAPNAYTISCILMACAHLSSLRMGKQIHAYVTRHHEYESSVYFVANCLIDMYSK 561
Query: 256 CGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFL 315
CG + +A +F+ S+ ++N VSWTS++SG+ MHG GKEA++ F +MQK G P+ ++FL
Sbjct: 562 CGDVDTARNVFD--SMPKRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFVPDDISFL 619
Query: 316 SVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPS 375
+L ACSH G+V++GL++FD M + V+ +HY C+ID+L R+GRL++A KT +P
Sbjct: 620 VLLYACSHSGMVDQGLDYFDIMRSDYGVIASAQHYACVIDLLARSGRLDKAWKTIQEMPM 679
Query: 376 EITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAER 435
E + +W LL AC H NVE+ E K++ M+ G Y L+ NI A R+ D R
Sbjct: 680 EPS-AAIWVALLSACRVHSNVELAEYALNKLVSMKAENDGSYTLISNIYATARRWKDVAR 738
Query: 436 LRRVMDERNAFKVPGCSLV 454
+R++M + K PGCS V
Sbjct: 739 IRQLMKKSGIKKRPGCSWV 757
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 97/383 (25%), Positives = 179/383 (46%), Gaps = 31/383 (8%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIY----THSHSPLPPLFDSFTYSFLIRTCATLSH 89
+N+++ + +P+ A L+ ++ I T+ S + + + ++ CA+L
Sbjct: 221 WNSIVAAHVKGSNPRTALDLFSEMTTIVHEKATNERSDIISIVN------ILPACASLKA 274
Query: 90 PNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITG 149
++H+ + G + +V AL++ Y G +KD+ +F+ M +++V+WN M+TG
Sbjct: 275 LPQTKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMKDAVNVFNVMEFKDVVSWNAMVTG 334
Query: 150 LVKWGELEFARSLFEEMPCRN----VVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEP 205
+ G+ A LF+ M N V++W+ +I GY + EAL F++M+ +EP
Sbjct: 335 YTQSGKFGAAFELFKNMRKENIPLDVITWSAVIAGYAQRGYGQEALDTFQQMILYG-SEP 393
Query: 206 SEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAF-----------DIRVLNCLIDTYA 254
+ +TI+++L A G + H Y K+ + D+ V N LID Y+
Sbjct: 394 NSVTIISLLSACASLGALSQGMETHAYSLKKCLLSLDNDFGGDGDGEDLVVHNALIDMYS 453
Query: 255 KCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRM--QKVGLKPNRV 312
KC +A +F I +N+V+WT +I G+A +G +A++ F M + + PN
Sbjct: 454 KCRSFKAARTIFNSIPRRERNVVTWTVMIGGYAQYGDSNDALKLFSEMISKPYAVAPNAY 513
Query: 313 TFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYG-CLIDMLGRAGRLEQAEKTAL 371
T +L AC+H + G + E + CLIDM + G ++ A
Sbjct: 514 TISCILMACAHLSSLRMGKQIHAYVTRHHEYESSVYFVANCLIDMYSKCGDVDTARNVFD 573
Query: 372 GIPSEITDVVVWRTLLGACSFHG 394
+P + V W +++ HG
Sbjct: 574 SMPKR--NEVSWTSMMSGYGMHG 594
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 99/370 (26%), Positives = 167/370 (45%), Gaps = 74/370 (20%)
Query: 73 DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLF 132
D FT + ++ C L G+ H +I GF+S+V+V ALV MY G L+D+S +F
Sbjct: 148 DHFTLPYALKACGELPSYRSGSAFHGLICCNGFESNVFVCNALVAMYSRSGSLEDASLVF 207
Query: 133 DEMPER---NLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNE 189
DE+ + ++++WN ++ VK A LF EM T I+ RS+
Sbjct: 208 DEITRKGIDDVISWNSIVAAHVKGSNPRTALDLFSEM--------TTIVHEKATNERSD- 258
Query: 190 ALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCL 249
I+I+ +LPA + + IH Y + G T D V N L
Sbjct: 259 -----------------IISIVNILPACASLKALPQTKEIHSYAIRNG-TFADAFVCNAL 300
Query: 250 IDTYAKCGCIFSASKL-----FEDI------------------------SVERKNL---- 276
IDTYAKCG + A + F+D+ ++ ++N+
Sbjct: 301 IDTYAKCGSMKDAVNVFNVMEFKDVVSWNAMVTGYTQSGKFGAAFELFKNMRKENIPLDV 360
Query: 277 VSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDK 336
++W+++I+G+A G G+EA++ F +M G +PN VT +S+L+AC+ G + +G+
Sbjct: 361 ITWSAVIAGYAQRGYGQEALDTFQQMILYGSEPNSVTIISLLSACASLGALSQGMETHAY 420
Query: 337 MVEEC-----------EVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRT 385
+++C D+ + LIDM + + A IP +VV W
Sbjct: 421 SLKKCLLSLDNDFGGDGDGEDLVVHNALIDMYSKCRSFKAARTIFNSIPRRERNVVTWTV 480
Query: 386 LLGACSFHGN 395
++G + +G+
Sbjct: 481 MIGGYAQYGD 490
>gi|115473893|ref|NP_001060545.1| Os07g0662700 [Oryza sativa Japonica Group]
gi|24414187|dbj|BAC22429.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|113612081|dbj|BAF22459.1| Os07g0662700 [Oryza sativa Japonica Group]
gi|125559498|gb|EAZ05034.1| hypothetical protein OsI_27217 [Oryza sativa Indica Group]
gi|125601406|gb|EAZ40982.1| hypothetical protein OsJ_25464 [Oryza sativa Japonica Group]
Length = 544
Score = 238 bits (606), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 144/420 (34%), Positives = 225/420 (53%), Gaps = 41/420 (9%)
Query: 69 PPLFDSFTYSFLIRTCATLSHPNLG-TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKD 127
P + ++ FL+R + + LHA++ K+G Q + V+ AL+ Y + G + D
Sbjct: 3 PSRLNQHSFLFLLREASASAAARRRLPPLHALLVKLGLQPYARVHNALIQAYAASGLVDD 62
Query: 128 SSKLFDEMPERNLV-------------------------------TWNVMITGLVKWGEL 156
+ ++FD M R+ V TW M+ GL + G++
Sbjct: 63 ARRVFDGMSHRDTVSFNSMIHAHAMSGDVVSARRLFERVPSPTPVTWTSMVAGLCRAGDV 122
Query: 157 EFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPA 216
AR LFEEMP R++VSW ++ G R EAL LFR+M+A E P+ T+L+ L A
Sbjct: 123 AAARRLFEEMPVRDLVSWNAMMSGLAGNRRPVEALCLFRRMMA-EGFAPNRGTVLSALAA 181
Query: 217 IWQNGDVKSCQLIHGYGE-KRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKN 275
G +++ + IH + E KR F +D + L+D YAKCG + A +F + +N
Sbjct: 182 CAGAGALETGKWIHAFVERKRLFRWWDEFLGTALLDMYAKCGAVELALDVF--TKLRSRN 239
Query: 276 LVSWTSIISGFAMHGMGKEAVENFGRMQ-KVGLKPNRVTFLSVLNACSHGGLVEEGLNFF 334
+W ++I+G AM+G +A++ F +M+ + P+ VTF+ VL ACSHGG V+ G F
Sbjct: 240 TCTWNAMINGLAMNGYSAKALDMFRKMELDRTVVPDEVTFVGVLLACSHGGFVDVGREHF 299
Query: 335 DKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHG 394
+ ++ + ++HY C++D+L R+G L++A K G+P + D VVWR LLG C H
Sbjct: 300 HMIEKKYGIRLILEHYACMVDLLARSGHLQEAHKIIAGMPMK-PDAVVWRALLGGCRLHK 358
Query: 395 NVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
+V+M E I EME GD+VL+ N+ A VGR+ E +RR M + K+PGCS +
Sbjct: 359 DVKMAETA---ISEMEATCSGDHVLLSNLYAAVGRWSGVEDVRRTMRSKGIEKIPGCSSI 415
>gi|359488559|ref|XP_002275581.2| PREDICTED: pentatricopeptide repeat-containing protein At3g26782,
mitochondrial-like [Vitis vinifera]
Length = 735
Score = 238 bits (606), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 142/421 (33%), Positives = 218/421 (51%), Gaps = 35/421 (8%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+ +++ Y + +A LL+K+ + S D ++ C+ +S ++
Sbjct: 221 WTSMITGYVQNDDAHRALLLFKEFLVEESGSEGDGEVCVDPIAMVSVLSACSRVSEKSIT 280
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
+H + K GF+ + V L++ Y K
Sbjct: 281 EGVHGFLIKRGFEGDLGVENTLMDAYA-------------------------------KC 309
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
GEL +R +F+ M R+V+SW II Y + S E++ +F +MV + +T+ AV
Sbjct: 310 GELGVSRRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNAVTLSAV 369
Query: 214 LPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVER 273
L A +G + + IH K G + ++ V +ID Y KCG + A K F+ +
Sbjct: 370 LLACAHSGSQRLGKCIHDQVIKMGLES-NVFVGTSIIDMYCKCGKVEMARKAFD--RMRE 426
Query: 274 KNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNF 333
KN+ SW+++++G+ MHG KEA+E F M G+KPN +TF+SVL ACSH GL+EEG ++
Sbjct: 427 KNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYITFVSVLAACSHAGLLEEGWHW 486
Query: 334 FDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFH 393
F M E +V P ++HYGC++D+LGRAG L++A G+ D VVW LLGAC H
Sbjct: 487 FKAMSHEFDVEPGVEHYGCMVDLLGRAGYLKEAFDLIKGMKLR-PDFVVWGALLGACRMH 545
Query: 394 GNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSL 453
NV++GE RK+ E++ G YVL+ NI A GR+ D ER+R +M K PG SL
Sbjct: 546 KNVDLGEISARKLFELDPKNCGYYVLLSNIYADAGRWEDVERMRILMKNSGLVKPPGFSL 605
Query: 454 V 454
V
Sbjct: 606 V 606
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 107/361 (29%), Positives = 174/361 (48%), Gaps = 41/361 (11%)
Query: 76 TYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEM 135
T+ I++C+ L + G Q H GF+ ++V++ALV+MY G L+D+ LFDE+
Sbjct: 154 TFPCAIKSCSALLDLHSGRQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEI 213
Query: 136 PERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFR 195
RN+V+W MITG V+ + A LF+E S DG ++ +A+
Sbjct: 214 SHRNIVSWTSMITGYVQNDDAHRALLLFKEFLVEESGSEG---DGEVCVD----PIAMVS 266
Query: 196 KMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAK 255
+ AC IT + +HG+ KRGF D+ V N L+D YAK
Sbjct: 267 VLSACSRVSEKSIT-----------------EGVHGFLIKRGFEG-DLGVENTLMDAYAK 308
Query: 256 CGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVG-LKPNRVTF 314
CG + + ++F+ ++ ++++SW SII+ +A +GM E++E F RM K G + N VT
Sbjct: 309 CGELGVSRRVFDGMA--ERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNAVTL 366
Query: 315 LSVLNACSHGGLVEEGLNFFDKMVE---ECEVLPDIKHYGCLIDMLGRAGRLEQAEKTAL 371
+VL AC+H G G D++++ E V +IDM + G++E A K
Sbjct: 367 SAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTS----IIDMYCKCGKVEMARKAFD 422
Query: 372 GIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEME-RGYGGDYVLMYNILAGVGRF 430
+ + +V W ++ HG+ + V EM G +Y+ ++LA
Sbjct: 423 RMREK--NVKSWSAMVAGYGMHGHAKEALEV---FYEMNMAGVKPNYITFVSVLAACSHA 477
Query: 431 G 431
G
Sbjct: 478 G 478
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 118/285 (41%), Gaps = 41/285 (14%)
Query: 170 NVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLI 229
NV SW +I R S EAL F M +P+ T + + D+ S +
Sbjct: 116 NVFSWNSVIAELARSGDSVEALRAFSSMRKLSL-KPNRSTFPCAIKSCSALLDLHSGRQA 174
Query: 230 HGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMH 289
H GF D+ V + L+D Y+KCG + A LF++IS +N+VSWTS+I+G+ +
Sbjct: 175 HQQALIFGFEP-DLFVSSALVDMYSKCGELRDARTLFDEIS--HRNIVSWTSMITGYVQN 231
Query: 290 GMGKEA--------VENFGRMQKVGLKPNRVTFLSVLNACS-----------HGGLVEEG 330
A VE G + + + +SVL+ACS HG L++ G
Sbjct: 232 DDAHRALLLFKEFLVEESGSEGDGEVCVDPIAMVSVLSACSRVSEKSITEGVHGFLIKRG 291
Query: 331 LNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGAC 390
D+ L+D + G L + + G+ DV+ W +++
Sbjct: 292 FE------------GDLGVENTLMDAYAKCGELGVSRRVFDGMAER--DVISWNSIIAVY 337
Query: 391 SFHG-NVEMGERVTRKILEMERGYGG---DYVLMYNILAGVGRFG 431
+ +G + E E R + + E Y VL+ +G R G
Sbjct: 338 AQNGMSTESMEIFHRMVKDGEINYNAVTLSAVLLACAHSGSQRLG 382
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 79/176 (44%), Gaps = 23/176 (13%)
Query: 271 VERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACS-----HGG 325
V++ N+ SW S+I+ A G EA+ F M+K+ LKPNR TF + +CS H G
Sbjct: 112 VDKTNVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALLDLHSG 171
Query: 326 LV--EEGLNF-FDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEIT--DV 380
++ L F F+ PD+ L+DM + G L A + EI+ ++
Sbjct: 172 RQAHQQALIFGFE---------PDLFVSSALVDMYSKCGELRDART----LFDEISHRNI 218
Query: 381 VVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERL 436
V W +++ + + + ++ L E G GD + + +A V R+
Sbjct: 219 VSWTSMITGYVQNDDAHRALLLFKEFLVEESGSEGDGEVCVDPIAMVSVLSACSRV 274
>gi|225460338|ref|XP_002280412.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g13880-like [Vitis vinifera]
Length = 802
Score = 238 bits (606), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 141/380 (37%), Positives = 203/380 (53%), Gaps = 36/380 (9%)
Query: 75 FTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDE 134
FT+S +++ C+T+ G Q+HA I K QS ++ ALV +Y G ++D K F
Sbjct: 330 FTFSSILKACSTIEAFECGKQIHAQIFKYNLQSDEFIGNALVELYSLSGSIEDGLKCFHS 389
Query: 135 MPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALF 194
P+ ++V+W +I G V+ G+ E +LF E+ LF
Sbjct: 390 TPKLDVVSWTSLIVGHVQNGQFEGGLTLFHEL--------------------------LF 423
Query: 195 RKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYA 254
+P E TI +L A VKS + IH Y K G F I + N I YA
Sbjct: 424 SG------RKPDEFTISIMLSACANLAAVKSGEQIHAYAIKTGIGNFTI-IQNSQICMYA 476
Query: 255 KCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTF 314
KCG I SA+ F++ + ++VSW+ +IS A HG KEAV+ F M+ G+ PN +TF
Sbjct: 477 KCGDIDSANMTFKE--TKNPDIVSWSVMISSNAQHGCAKEAVDLFELMKGSGIAPNHITF 534
Query: 315 LSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIP 374
L VL ACSHGGLVEEGL +F+ M ++ + P++KH C++D+LGRAGRL +AE +
Sbjct: 535 LGVLVACSHGGLVEEGLRYFEIMKKDHGITPNVKHSACIVDLLGRAGRLAEAESFIMDSG 594
Query: 375 SEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAE 434
E D V+WR+LL AC H + G+RV +++E+E YVL+YNI G A
Sbjct: 595 FE-GDPVMWRSLLSACRVHKATDTGKRVAERVIELEPEAAASYVLLYNIYNDAGIQMPAT 653
Query: 435 RLRRVMDERNAFKVPGCSLV 454
+R +M +R K PG S +
Sbjct: 654 EIRNLMKDRGVKKEPGLSWI 673
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 91/343 (26%), Positives = 149/343 (43%), Gaps = 45/343 (13%)
Query: 72 FDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKL 131
D FT+S + C LG +HA+I+ G V + +L++MY
Sbjct: 118 LDKFTFSNALSVCGRTLDLRLGRLIHALITVSGLGGPVLLTNSLIDMYC----------- 166
Query: 132 FDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEAL 191
K G +++AR +FE + VSW +I GY R+ ++E L
Sbjct: 167 --------------------KCGRIDWARLVFESADELDSVSWNSLIAGYVRIGSNDEML 206
Query: 192 ALFRKMVACEYTEPSEITILAVLPAIWQN--GDVKSCQLIHGYGEKRGFTAFDIRVLNCL 249
L KM+ + + + L A N ++ +++HG K G D+ V L
Sbjct: 207 RLLVKMLR-HGLNLNSYALGSALKACGSNFSSSIECGKMLHGCAVKLGLD-LDVVVGTAL 264
Query: 250 IDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGF-AMHGM----GKEAVENFGRMQK 304
+DTYAK G + A+K+F+ + N+V + ++I+GF M M EA+ F MQ
Sbjct: 265 LDTYAKIGDLEDATKIFK--LMPDPNVVMYNAMIAGFLQMETMADEFANEAMYLFFEMQS 322
Query: 305 VGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLE 364
G+KP+ TF S+L ACS E G ++ + + D L+++ +G +E
Sbjct: 323 RGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFKY-NLQSDEFIGNALVELYSLSGSIE 381
Query: 365 QAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKIL 407
K P DVV W +L+ +G E G + ++L
Sbjct: 382 DGLKCFHSTPK--LDVVSWTSLIVGHVQNGQFEGGLTLFHELL 422
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 96/343 (27%), Positives = 145/343 (42%), Gaps = 62/343 (18%)
Query: 62 THSHSPLP-----PLFDSFTYSFLIRTCATLSHPNL-GTQLHAVISKVGFQSHVYVNTAL 115
T H+P P PL DS TY+ L++ C+T + + G H + K F+ +++ L
Sbjct: 3 TPPHNPQPYYLGLPL-DSVTYTKLVQ-CSTRTGSLIHGKLAHMHMIKTCFKPCLFLLNNL 60
Query: 116 VNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWT 175
+ MY K GE + A+ LF+ MP RNVVSW
Sbjct: 61 LYMYC-------------------------------KCGETDVAKKLFDRMPKRNVVSWN 89
Query: 176 GIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEK 235
+I GYT+M +E + LF++ + + T L + D++ +LIH
Sbjct: 90 SLISGYTQMGFYHEVMNLFKEARMSDL-RLDKFTFSNALSVCGRTLDLRLGRLIHALITV 148
Query: 236 RGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEA 295
G + + N LID Y KCG I A +FE S + + VSW S+I+G+ G E
Sbjct: 149 SGLGG-PVLLTNSLIDMYCKCGRIDWARLVFE--SADELDSVSWNSLIAGYVRIGSNDEM 205
Query: 296 VENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFD-----KMVEECEVL----PD 346
+ +M + GL N S L AC G NF KM+ C V D
Sbjct: 206 LRLLVKMLRHGLNLNSYALGSALKAC--------GSNFSSSIECGKMLHGCAVKLGLDLD 257
Query: 347 IKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGA 389
+ L+D + G LE A K +P +VV++ ++
Sbjct: 258 VVVGTALLDTYAKIGDLEDATKIFKLMPD--PNVVMYNAMIAG 298
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 81/334 (24%), Positives = 140/334 (41%), Gaps = 53/334 (15%)
Query: 72 FDSFTYSFLIRTCAT--LSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSS 129
+S+ ++ C + S G LH K+G V V TAL++ Y
Sbjct: 219 LNSYALGSALKACGSNFSSSIECGKMLHGCAVKLGLDLDVVVGTALLDTYA--------- 269
Query: 130 KLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNR--- 186
K G+LE A +F+ MP NVV + +I G+ +M
Sbjct: 270 ----------------------KIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMAD 307
Query: 187 --SNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIR 244
+NEA+ LF +M + +PSE T ++L A + + IH K + D
Sbjct: 308 EFANEAMYLFFEMQS-RGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQS-DEF 365
Query: 245 VLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQK 304
+ N L++ Y+ G I K F S + ++VSWTS+I G +G + + F +
Sbjct: 366 IGNALVELYSLSGSIEDGLKCFH--STPKLDVVSWTSLIVGHVQNGQFEGGLTLFHELLF 423
Query: 305 VGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCL----IDMLGRA 360
G KP+ T +L+AC++ V+ G + + + I ++ + I M +
Sbjct: 424 SGRKPDEFTISIMLSACANLAAVKSG-----EQIHAYAIKTGIGNFTIIQNSQICMYAKC 478
Query: 361 GRLEQAEKTALGIPSEITDVVVWRTLLGACSFHG 394
G ++ A T ++ D+V W ++ + + HG
Sbjct: 479 GDIDSANMTFK--ETKNPDIVSWSVMISSNAQHG 510
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 83/217 (38%), Gaps = 33/217 (15%)
Query: 73 DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLF 132
D FT S ++ CA L+ G Q+HA K G + + + + MY G + ++ F
Sbjct: 429 DEFTISIMLSACANLAAVKSGEQIHAYAIKTGIGNFTIIQNSQICMYAKCGDIDSANMTF 488
Query: 133 DEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALA 192
E ++V+W+VMI+ + G + A LFE M +
Sbjct: 489 KETKNPDIVSWSVMISSNAQHGCAKEAVDLFELMKGSGIA-------------------- 528
Query: 193 LFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDT 252
P+ IT L VL A G V+ +K +++ C++D
Sbjct: 529 ------------PNHITFLGVLVACSHGGLVEEGLRYFEIMKKDHGITPNVKHSACIVDL 576
Query: 253 YAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMH 289
+ G + A D E + V W S++S +H
Sbjct: 577 LGRAGRLAEAESFIMDSGFE-GDPVMWRSLLSACRVH 612
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 80/169 (47%), Gaps = 12/169 (7%)
Query: 245 VLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQK 304
+LN L+ Y KCG A KLF+ + ++N+VSW S+ISG+ G E + F +
Sbjct: 56 LLNNLLYMYCKCGETDVAKKLFD--RMPKRNVVSWNSLISGYTQMGFYHEVMNLFKEARM 113
Query: 305 VGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLE 364
L+ ++ TF + L+ C + G ++ + + LIDM + GR++
Sbjct: 114 SDLRLDKFTFSNALSVCGRTLDLRLG-RLIHALITVSGLGGPVLLTNSLIDMYCKCGRID 172
Query: 365 QAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMG--ERVTRKILEMER 411
A + E+ D V W +L+ G V +G + + R +++M R
Sbjct: 173 WA-RLVFESADEL-DSVSWNSLIA-----GYVRIGSNDEMLRLLVKMLR 214
>gi|125606358|gb|EAZ45394.1| hypothetical protein OsJ_30043 [Oryza sativa Japonica Group]
Length = 494
Score = 238 bits (606), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 139/424 (32%), Positives = 229/424 (54%), Gaps = 14/424 (3%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+NTLL +S + + ++ L+ Q+ S L D T L+ CA L P+ G
Sbjct: 40 WNTLLMGHSRSGNAKQCLALFNQMWM------SGLT--CDDATLCILVDACAELPDPSTG 91
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
+H V+ + G+ VN +L++ Y L + ++F+ M R +WN +I ++
Sbjct: 92 FAIHKVVVQSGWNGIPEVNNSLISFYTKFSLLDCAVQIFESMKTRTTASWNSLIDAHARF 151
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
G +E A LFE P N++SWT +I G+ R + ++EALA F KM+ EY +P + T AV
Sbjct: 152 GYIEQAALLFESAPETNIISWTAMIGGFARNSLTSEALAHFVKMLTQEYIQPDDFTFGAV 211
Query: 214 LPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVER 273
L A + S +++H + GF ++ + V N L+D YAKCG + A+ +F+ ++ +
Sbjct: 212 LHACASAPCLASGRMVHSCAFQGGFASY-LYVANNLVDMYAKCGDVEGANNVFD--AIHQ 268
Query: 274 KNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNF 333
K+LVSW +++ GFA++G+ KEA+E + M + P+ VTF +L ACSH GL+E+G F
Sbjct: 269 KDLVSWNTMLFGFAINGLPKEALEVYEIMTYHNVSPDEVTFTGLLTACSHSGLLEQGRAF 328
Query: 334 FDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITD--VVVWRTLLGACS 391
F+ M+ V P +H C++DM R+G + +A + P + + LL CS
Sbjct: 329 FESMMSVHGVQPKPEHLSCVLDMYARSGNIAKAIEMMEQYPEIVKSPGSGLSEALLSFCS 388
Query: 392 FHG-NVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPG 450
+ +G +V ++ YV++ N+L GR+ +AER+RR M E+ K PG
Sbjct: 389 SENLDFWVGRKVGDDVVARAPARDTGYVMLSNLLCASGRWDEAERVRRAMAEQGIKKSPG 448
Query: 451 CSLV 454
CS +
Sbjct: 449 CSWI 452
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/298 (28%), Positives = 140/298 (46%), Gaps = 51/298 (17%)
Query: 135 MPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALF 194
MPERN ++W ++ V G +E A LF+EMP ++ V+W ++ G++R + + LALF
Sbjct: 1 MPERNALSWCSLLHAFVVSGHMELAHELFDEMPSKSNVAWNTLLMGHSRSGNAKQCLALF 60
Query: 195 RKM----VACEYTE-----------PSEITILAVLPAIWQNG-----DVKSCQLIHGYGE 234
+M + C+ P T A+ + Q+G +V + LI Y +
Sbjct: 61 NQMWMSGLTCDDATLCILVDACAELPDPSTGFAIHKVVVQSGWNGIPEVNN-SLISFYTK 119
Query: 235 KRGFTAFDIRV-------------LNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTS 281
F+ D V N LID +A+ G I A+ LFE S N++SWT+
Sbjct: 120 ---FSLLDCAVQIFESMKTRTTASWNSLIDAHARFGYIEQAALLFE--SAPETNIISWTA 174
Query: 282 IISGFAMHGMGKEAVENFGRM-QKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEE 340
+I GFA + + EA+ +F +M + ++P+ TF +VL+AC+ + G +MV
Sbjct: 175 MIGGFARNSLTSEALAHFVKMLTQEYIQPDDFTFGAVLHACASAPCLASG-----RMVHS 229
Query: 341 CEVLPDIKHY----GCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHG 394
C Y L+DM + G +E A I + D+V W T+L + +G
Sbjct: 230 CAFQGGFASYLYVANNLVDMYAKCGDVEGANNVFDAIHQK--DLVSWNTMLFGFAING 285
>gi|413939596|gb|AFW74147.1| hypothetical protein ZEAMMB73_269656 [Zea mays]
Length = 524
Score = 238 bits (606), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 148/459 (32%), Positives = 242/459 (52%), Gaps = 31/459 (6%)
Query: 16 QIHSHLLTTNSLLHHSQLFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLF--D 73
Q+ HLL +++LL + L L P A L+ +L++I P F +
Sbjct: 25 QVDGHLLRSSTLLLADRFLPNQLLRSLLPAHPLGALRLFPRLRRII--------PDFRPN 76
Query: 74 SFTYSFLIRTCATLSHPN-------LGTQ-----LHAVISKVGFQSHVYVNTALVNMYVS 121
++T+SFL++ A S P G+ LHA+ + + +H YV L++ Y +
Sbjct: 77 NYTFSFLLKAAADSSAPPYLEPESPFGSHAIVPCLHALAVVLAWDAHAYVANGLIHAYAT 136
Query: 122 LGFLKDSSKLFD-EMPER--NLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGII 178
G L + +LF + R ++ +W ++T K G ++ AR+LF+ MP RN V+W+ ++
Sbjct: 137 HGVLPAARRLFGGAVASRAADVCSWTSLLTACAKAGHVDEARALFDGMPRRNDVAWSAML 196
Query: 179 DGYTRMNRSNEALALFRKMV-ACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGY--GEK 235
Y +A+ LF M+ +C P+ ++ VL A G + + +H G
Sbjct: 197 SAYVAAGSFGDAVRLFEDMLRSC--VRPNRAAVVGVLTACGALGALDQGRWVHALLVGGG 254
Query: 236 RGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEA 295
A D V L+D YAKCG + +A ++F ++++ ++T++ISG + HG EA
Sbjct: 255 GHGVAMDGVVATALVDMYAKCGSLETARQVFAAAPRGQRDVFAYTAMISGLSDHGRCGEA 314
Query: 296 VENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLID 355
++ FG+M G++PN VTF+ VL AC GLV F M + P ++HYGCL+D
Sbjct: 315 IDLFGQMLVEGVRPNEVTFICVLTACGRAGLVGRAKEVFRSMGAVHGMEPGVEHYGCLVD 374
Query: 356 MLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGG 415
+LGRAG+L A + +P D V LL AC+ HG+VE GE+V R + E+ + G
Sbjct: 375 VLGRAGQLADALEAVRSMPMR-PDSYVLGALLNACAAHGDVEAGEQVVRWLAELGLDHSG 433
Query: 416 DYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
+V + N+ AG G++ + ++RR M+ER KVPGCS++
Sbjct: 434 VHVQLSNMYAGWGKWEEVLKVRRDMEERRVAKVPGCSML 472
>gi|356544269|ref|XP_003540576.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Glycine max]
Length = 522
Score = 237 bits (605), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 148/469 (31%), Positives = 248/469 (52%), Gaps = 46/469 (9%)
Query: 16 QIHSHLLTTNSLLHHSQLFNTLLHFYSLAESPQKAFLLYKQLQQIYT-HSHSPLPPLFDS 74
QIH H +T + L + + + LL FY+ ++ L+ +T SH P P LFD
Sbjct: 22 QIHGHAIT-HGLARFAFISSKLLAFYARSD-----------LRYAHTLFSHIPFPNLFDY 69
Query: 75 FT--------YS--FLIRTCATLSHPNLGT----------------QLHAVISKVGFQSH 108
T YS F I+ PN T QLH+ I + G S
Sbjct: 70 NTIITAFSPHYSSLFFIQMLNAAVSPNSRTFSLLLSKSSPSLPFLHQLHSHIIRRGHVSD 129
Query: 109 VYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPC 168
YV T+L+ Y + G + + +LFD+ P +N+ W ++TG G + AR+LF+ +P
Sbjct: 130 FYVITSLLAAYSNHGSTRAARRLFDQSPYKNVACWTSLVTGYCNNGLVNDARNLFDAIPE 189
Query: 169 R--NVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSC 226
R N VS++ ++ GY + E + LFR++ +P+ + +VL A G +
Sbjct: 190 RERNDVSYSAMVSGYVKNGCFREGIQLFRELKD-RNVKPNNSLLASVLSACASVGAFEEG 248
Query: 227 QLIHGY-GEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISG 285
+ IH Y + + +++ + LID Y KCGC+ A ++F ++ K++ +W++++ G
Sbjct: 249 KWIHAYVDQNKSQCYYELELGTALIDFYTKCGCVEPAQRVFGNMKT--KDVAAWSAMVLG 306
Query: 286 FAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLP 345
A++ +EA+E F M+KVG +PN VTF+ VL AC+H L E L F M ++ ++
Sbjct: 307 LAINAKNQEALELFEEMEKVGPRPNAVTFIGVLTACNHKDLFGEALKLFGYMSDKYGIVA 366
Query: 346 DIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRK 405
I+HYGC++D+L R+G++E+A + + E D V+W +LL C H N+E+G +V +
Sbjct: 367 SIEHYGCVVDVLARSGKIEEALEFIKSMEVE-PDGVIWGSLLNGCFLHNNIELGHKVGKY 425
Query: 406 ILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
++E+E G+GG YVL+ N+ A +G++ R+ M +R V G S +
Sbjct: 426 LVELEPGHGGRYVLLSNVYATMGKWEAVLETRKFMKDRGVPAVSGSSFI 474
>gi|347954530|gb|AEP33765.1| organelle transcript processing 82, partial [Lepidium sativum]
Length = 672
Score = 237 bits (605), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 140/423 (33%), Positives = 232/423 (54%), Gaps = 46/423 (10%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+N ++ Y + ++A LYK + + + + P D T ++ CA LG
Sbjct: 165 WNAMISGYVETCNFKEALELYKDMMK------TNVKP--DESTMVTVVSACAQSGSIELG 216
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
QLH+ I GF S++ + L+++Y K
Sbjct: 217 RQLHSWIEDHGFGSNIKIVNVLIDLYS-------------------------------KC 245
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
GE+E A LF+ + ++V+SW +I G+T MN EAL LF++M+ + P+++T+L+V
Sbjct: 246 GEVETACGLFQGLAKKDVISWNTLIGGHTHMNLYKEALLLFQEMLRSGES-PNDVTMLSV 304
Query: 214 LPAIWQNGDVKSCQLIHGYGEKR--GFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISV 271
LPA G + + IH Y KR G T +L LID YAKCG I +A ++F+ S+
Sbjct: 305 LPACAHLGAIDIGRWIHVYINKRLKGVTNAS-SLLTSLIDMYAKCGDIEAAKQVFD--SM 361
Query: 272 ERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGL 331
++L SW ++I GFAMHG A + F +M+K G+ P+ +TF+ +L+ACSH G+++ G
Sbjct: 362 LTRSLSSWNAMIFGFAMHGKANAAFDLFSKMRKNGIDPDDITFVGLLSACSHSGMLDLGR 421
Query: 332 NFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACS 391
+ F M ++ ++ P ++HYGC+ID+LG G ++A++ +P E D V+W +LL AC
Sbjct: 422 HIFRSMSQDYKITPKLEHYGCMIDLLGHCGLFKEAKEMIRTMPME-PDGVIWCSLLKACK 480
Query: 392 FHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGC 451
H NVE+GE + ++++E G YVL+ NI A GR+ ++R +++++ K PGC
Sbjct: 481 MHNNVELGESYAQNLIKIEPENPGSYVLLSNIYATAGRWDQVAKIRTLLNDKGIKKAPGC 540
Query: 452 SLV 454
S +
Sbjct: 541 SSI 543
Score = 188 bits (477), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 134/452 (29%), Positives = 225/452 (49%), Gaps = 64/452 (14%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNL 92
++NT+ ++L A LY + S LP +S+++ FL+++CA
Sbjct: 32 IWNTMFRGHALNSDSVTALKLY-----VCMISLGLLP---NSYSFPFLLKSCAKSKALIE 83
Query: 93 GTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVK 152
G Q+H + K+G+ +YVNT+L++MY G L+D+ K+FD R++V++ +ITG
Sbjct: 84 GQQIHGHVLKLGYDLDMYVNTSLISMYAQNGRLEDAHKVFDRSSHRHVVSYTALITGYAS 143
Query: 153 WGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILA 212
G + AR LF+E+ ++VVSW +I GY EAL L++ M+ +P E T++
Sbjct: 144 RGYINNARKLFDEISVKDVVSWNAMISGYVETCNFKEALELYKDMMKTN-VKPDESTMVT 202
Query: 213 VLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVE 272
V+ A Q+G ++ + +H + E GF + +I+++N LID Y+KCG + +A LF+ ++
Sbjct: 203 VVSACAQSGSIELGRQLHSWIEDHGFGS-NIKIVNVLIDLYSKCGEVETACGLFQGLA-- 259
Query: 273 RKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEG-- 330
+K+++SW ++I G + KEA+ F M + G PN VT LSVL AC+H G ++ G
Sbjct: 260 KKDVISWNTLIGGHTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAHLGAIDIGRW 319
Query: 331 ----LNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEK------------------ 368
+N K V L LIDM + G +E A++
Sbjct: 320 IHVYINKRLKGVTNASSL-----LTSLIDMYAKCGDIEAAKQVFDSMLTRSLSSWNAMIF 374
Query: 369 ---------TALGIPSEI------TDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGY 413
A + S++ D + + LL ACS G +++G + R M + Y
Sbjct: 375 GFAMHGKANAAFDLFSKMRKNGIDPDDITFVGLLSACSHSGMLDLGRHIFR---SMSQDY 431
Query: 414 G-----GDYVLMYNILAGVGRFGDAERLRRVM 440
Y M ++L G F +A+ + R M
Sbjct: 432 KITPKLEHYGCMIDLLGHCGLFKEAKEMIRTM 463
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 53/107 (49%), Gaps = 3/107 (2%)
Query: 262 ASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNAC 321
A +FE +++ NL+ W ++ G A++ A++ + M +GL PN +F +L +C
Sbjct: 18 AISIFE--TIQEPNLLIWNTMFRGHALNSDSVTALKLYVCMISLGLLPNSYSFPFLLKSC 75
Query: 322 SHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEK 368
+ + EG +++ L D+ LI M + GRLE A K
Sbjct: 76 AKSKALIEGQQIHGHVLKLGYDL-DMYVNTSLISMYAQNGRLEDAHK 121
>gi|449465220|ref|XP_004150326.1| PREDICTED: pentatricopeptide repeat-containing protein At5g19020,
mitochondrial-like [Cucumis sativus]
Length = 874
Score = 237 bits (605), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 140/407 (34%), Positives = 217/407 (53%), Gaps = 11/407 (2%)
Query: 48 QKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQS 107
+KA LLY +++ H + L + D L+ C G Q H++I K GF
Sbjct: 478 RKALLLYSAMRKSDLHPNEVL--IVD------LLSACGQSVSIEEGRQFHSLIVKNGFVC 529
Query: 108 HVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMP 167
++ +++ Y + + + + + +L + NVMI G K G ++ AR +F+ MP
Sbjct: 530 FDFIQATIISFYAACRRIDLAYLQYQMSDKSHLTSSNVMIVGFTKNGMIDQARQIFDMMP 589
Query: 168 CRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQ 227
++V SW+ +I GY + + AL LF M+ + EP+EIT+++V AI G + +
Sbjct: 590 EKDVFSWSTMISGYAQNELPDVALDLFHGMIDSK-VEPNEITMVSVFSAIAALGKLPEGR 648
Query: 228 LIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFA 287
H Y + D + +ID YAKCG I +A +F I + + W +II G A
Sbjct: 649 WAHEYVCNKVIPLND-NLSAAIIDMYAKCGSIDTALDVFRQIKDKTSTVSPWNAIICGLA 707
Query: 288 MHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDI 347
MHG ++E F +Q+ +K N +TFL VL+AC H GLVE G +F M + V P+I
Sbjct: 708 MHGHANLSLEIFSNLQRRSIKLNSITFLGVLSACCHAGLVEVGERYFWSMKTQHGVEPNI 767
Query: 348 KHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKIL 407
KHYGCL+D+LGR GRL +AE+ +P + DVV+W TLL + HG VE+GER +
Sbjct: 768 KHYGCLVDLLGRVGRLREAEEIVRTMPMK-ADVVIWGTLLASSRTHGEVEIGERAAENLA 826
Query: 408 EMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
++ +G VL+ N+ A G + DA +RR + + + PG S V
Sbjct: 827 RLQPSHGPGRVLLSNLYADAGLWEDAALVRRAIQSQRMIRSPGYSGV 873
Score = 150 bits (380), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 117/416 (28%), Positives = 189/416 (45%), Gaps = 79/416 (18%)
Query: 96 LHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGE 155
LHA++ K+ F V ++T L++MY LKD+ +LF+EMP RN V+WNVM+ G VK G
Sbjct: 386 LHALVIKLHFFGLVLISTNLLHMYCVFSSLKDTKRLFNEMPVRNTVSWNVMLKGYVKSGL 445
Query: 156 LEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLP 215
++ AR LFE +P R+V SW +IDG+ +M R +AL L+ M + P+E+ I+ +L
Sbjct: 446 VDQARELFERIPERDVFSWAIMIDGFVQMKRLRKALLLYSAMRKSDL-HPNEVLIVDLLS 504
Query: 216 AIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKC------------------- 256
A Q+ ++ + H K GF FD + +I YA C
Sbjct: 505 ACGQSVSIEEGRQFHSLIVKNGFVCFDF-IQATIISFYAACRRIDLAYLQYQMSDKSHLT 563
Query: 257 ------------GCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQK 304
G I A ++F+ + K++ SW+++ISG+A + + A++ F M
Sbjct: 564 SSNVMIVGFTKNGMIDQARQIFD--MMPEKDVFSWSTMISGYAQNELPDVALDLFHGMID 621
Query: 305 VGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLE 364
++PN +T +SV +A + G + EG + + + L D +IDM + G ++
Sbjct: 622 SKVEPNEITMVSVFSAIAALGKLPEGRWAHEYVCNKVIPLND-NLSAAIIDMYAKCGSID 680
Query: 365 QAEKTALGIPSEITDVVVWRTL-----------------------------------LGA 389
A I + + V W + L A
Sbjct: 681 TALDVFRQIKDKTSTVSPWNAIICGLAMHGHANLSLEIFSNLQRRSIKLNSITFLGVLSA 740
Query: 390 CSFHGNVEMGERVTRKILEMERGYGGD-----YVLMYNILAGVGRFGDAERLRRVM 440
C G VE+GER M+ +G + Y + ++L VGR +AE + R M
Sbjct: 741 CCHAGLVEVGERY---FWSMKTQHGVEPNIKHYGCLVDLLGRVGRLREAEEIVRTM 793
Score = 134 bits (338), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 87/289 (30%), Positives = 146/289 (50%), Gaps = 33/289 (11%)
Query: 81 IRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNL 140
++ CA+ S + G Q+HA++ K GF S+ ++ +L+NMYV G L + LFD +
Sbjct: 239 LKYCASSSAISSGQQIHAIVLKYGFNSNTFILNSLINMYVKCGLLSSARLLFDSCSVLDS 298
Query: 141 VTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVAC 200
V+ N+M++G VK +LE AR LF +MP R VS+T +I G + + EA+ +F+ M +
Sbjct: 299 VSCNIMMSGYVKLRQLENARQLFAKMPERGCVSYTTMILGLAQNDCWGEAIEVFKDMRSA 358
Query: 201 EYTEPSEITILAVLPAIWQNGDVKSCQLIHG-------YG-------------------- 233
P+E+T+ +V+ A G + +C+++H +G
Sbjct: 359 G-VAPNEVTMASVMSACSHIGGIWNCRMLHALVIKLHFFGLVLISTNLLHMYCVFSSLKD 417
Query: 234 EKRGFTAFDIR---VLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHG 290
KR F +R N ++ Y K G + A +LFE I +++ SW +I GF
Sbjct: 418 TKRLFNEMPVRNTVSWNVMLKGYVKSGLVDQARELFERI--PERDVFSWAIMIDGFVQMK 475
Query: 291 MGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVE 339
++A+ + M+K L PN V + +L+AC +EEG F +V+
Sbjct: 476 RLRKALLLYSAMRKSDLHPNEVLIVDLLSACGQSVSIEEGRQFHSLIVK 524
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 69/148 (46%), Gaps = 30/148 (20%)
Query: 207 EITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLF 266
E+++++ L + + S Q IH K GF + + +LN LI+ Y KCG + SA LF
Sbjct: 232 ELSVVSALKYCASSSAISSGQQIHAIVLKYGFNS-NTFILNSLINMYVKCGLLSSARLLF 290
Query: 267 EDISV-----------------------------ERKNLVSWTSIISGFAMHGMGKEAVE 297
+ SV + VS+T++I G A + EA+E
Sbjct: 291 DSCSVLDSVSCNIMMSGYVKLRQLENARQLFAKMPERGCVSYTTMILGLAQNDCWGEAIE 350
Query: 298 NFGRMQKVGLKPNRVTFLSVLNACSHGG 325
F M+ G+ PN VT SV++ACSH G
Sbjct: 351 VFKDMRSAGVAPNEVTMASVMSACSHIG 378
>gi|193806402|sp|Q56X05.2|PPR15_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g06145; AltName: Full=Protein EMBRYO DEFECTIVE 1444
Length = 577
Score = 237 bits (605), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 143/454 (31%), Positives = 237/454 (52%), Gaps = 47/454 (10%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNL 92
++N L + P ++ LY ++ + S SP S+TYS L++ + S
Sbjct: 93 VYNALFKGFVTCSHPIRSLELYVRMLR---DSVSP-----SSYTYSSLVKASSFASR--F 142
Query: 93 GTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTW--------- 143
G L A I K GF HV + T L++ Y + G ++++ K+FDEMPER+ + W
Sbjct: 143 GESLQAHIWKFGFGFHVKIQTTLIDFYSATGRIREARKVFDEMPERDDIAWTTMVSAYRR 202
Query: 144 ----------------------NVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGY 181
N +I G + G LE A SLF +MP ++++SWT +I GY
Sbjct: 203 VLDMDSANSLANQMSEKNEATSNCLINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGY 262
Query: 182 TRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAF 241
++ R EA+A+F KM+ E P E+T+ V+ A G ++ + +H Y + GF
Sbjct: 263 SQNKRYREAIAVFYKMME-EGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFV-L 320
Query: 242 DIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGR 301
D+ + + L+D Y+KCG + A +F ++ +KNL W SII G A HG +EA++ F +
Sbjct: 321 DVYIGSALVDMYSKCGSLERALLVF--FNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAK 378
Query: 302 MQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAG 361
M+ +KPN VTF+SV AC+H GLV+EG + M+++ ++ +++HYG ++ + +AG
Sbjct: 379 MEMESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSMIDDYSIVSNVEHYGGMVHLFSKAG 438
Query: 362 RLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMY 421
+ +A + + E + V+W LL C H N+ + E K++ +E G Y L+
Sbjct: 439 LIYEALELIGNMEFE-PNAVIWGALLDGCRIHKNLVIAEIAFNKLMVLEPMNSGYYFLLV 497
Query: 422 NILAGVGRFGDAERLRRVMDERNAFKV-PGCSLV 454
++ A R+ D +R M E K+ PG S +
Sbjct: 498 SMYAEQNRWRDVAEIRGRMRELGIEKICPGTSSI 531
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 66/301 (21%), Positives = 129/301 (42%), Gaps = 33/301 (10%)
Query: 144 NVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYT 203
N IT + L+ A S +M NV + + G+ + +L L+ +M+ +
Sbjct: 64 NQFITACTSFKRLDLAVSTMTQMQEPNVFVYNALFKGFVTCSHPIRSLELYVRMLR-DSV 122
Query: 204 EPSEITILAVLPAIWQNGDVKSCQLIHGYGE-------KRGFTAFDIRVLNCLIDTYAKC 256
PS T ++ VK+ +GE K GF F +++ LID Y+
Sbjct: 123 SPSSYTYSSL---------VKASSFASRFGESLQAHIWKFGF-GFHVKIQTTLIDFYSAT 172
Query: 257 GCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLS 316
G I A K+F+++ ER + ++WT+++S + + ++ + + N T
Sbjct: 173 GRIREARKVFDEMP-ERDD-IAWTTMVSAYR-RVLDMDSANSLANQMS---EKNEATSNC 226
Query: 317 VLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSE 376
++N G +E+ + F++M + DI + +I + R +A + E
Sbjct: 227 LINGYMGLGNLEQAESLFNQM-----PVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEE 281
Query: 377 --ITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAE 434
I D V T++ AC+ G +E+G+ V + ++ G+ D + ++ + G E
Sbjct: 282 GIIPDEVTMSTVISACAHLGVLEIGKEV--HMYTLQNGFVLDVYIGSALVDMYSKCGSLE 339
Query: 435 R 435
R
Sbjct: 340 R 340
>gi|449463559|ref|XP_004149501.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14730-like [Cucumis sativus]
gi|449511944|ref|XP_004164096.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14730-like [Cucumis sativus]
Length = 566
Score = 237 bits (605), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 143/428 (33%), Positives = 226/428 (52%), Gaps = 49/428 (11%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNL 92
L+N +++ Y+ KA +++K++ + FT + ++ ++ N
Sbjct: 142 LWNAMINGYTKIGHLNKAVVVFKRMGEEGIS--------LSRFTTTSILSILTSMGDINN 193
Query: 93 GTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVK 152
G +H +++K+G+ S V V+ AL++MY +D+ +F+ + E++L
Sbjct: 194 GRAIHGIVTKMGYSSCVAVSNALIDMYGKCKHTEDALMIFEMINEKDLF----------- 242
Query: 153 WGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILA 212
SW II + + + + L LF KM+ P ITI A
Sbjct: 243 --------------------SWNSIISAHEQCDDHDGTLRLFGKMLGSRVL-PDVITITA 281
Query: 213 VLPAIWQNGDVKSCQLIHGY----GEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFED 268
VLPA + + IHGY G + D+ + N ++D YAKCGC+ +A +F+
Sbjct: 282 VLPACSHLAALMHGREIHGYMIVNGLGKNENGDDVLLNNAIMDMYAKCGCMKNADIIFD- 340
Query: 269 ISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVE 328
+ K++ SW +I G+AMHG G EA++ F RM + +KP+ VTF+ VL+ACSH G V
Sbjct: 341 -LMRNKDVASWNIMIMGYAMHGYGTEALDMFHRMCEAQIKPDVVTFVGVLSACSHAGFVH 399
Query: 329 EGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLG 388
+G +F +M E V+P I+HY C+IDMLGRAG L +A A IP E ++++W LLG
Sbjct: 400 QGRSFLTRMELEFGVIPTIEHYTCIIDMLGRAGHLGEAYDLAQRIPLE-DNLILWMALLG 458
Query: 389 ACSFHGNVEMGERVTRKILEMERGY--GGDYVLMYNILAGVGRFGDAERLRRVMDERNAF 446
AC HGN E+G V KI ++E + G Y+LM ++ VGR+ +A +RR M E+N
Sbjct: 459 ACRLHGNAELGNVVGEKITQLEPKHCGSGSYILMSSLYGVVGRYEEALEVRRTMKEQNVK 518
Query: 447 KVPGCSLV 454
K PGCS +
Sbjct: 519 KTPGCSWI 526
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 98/386 (25%), Positives = 171/386 (44%), Gaps = 54/386 (13%)
Query: 15 TQIHSHLLTTNSLLHHSQLF--NTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLF 72
Q+ +L H +F N ++ + F YK+++ + +P
Sbjct: 24 NQMEEAVLVFRDPYHERNVFAYNAIIAGFVANGLAADGFQFYKRMRSV-----GVMP--- 75
Query: 73 DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLF 132
D FT+ ++R C ++H + K+G + +V+V +ALVN Y+ + +D+ K+F
Sbjct: 76 DKFTFPCVVRACCEFMEVR---KIHGCLFKMGLELNVFVGSALVNTYLKVDGTEDAEKVF 132
Query: 133 DEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALA 192
+E+PER++V WN MI G YT++ N+A+
Sbjct: 133 EELPERDVVLWNAMING-------------------------------YTKIGHLNKAVV 161
Query: 193 LFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDT 252
+F++M E S T ++L + GD+ + + IHG K G+++ + V N LID
Sbjct: 162 VFKRM-GEEGISLSRFTTTSILSILTSMGDINNGRAIHGIVTKMGYSSC-VAVSNALIDM 219
Query: 253 YAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRV 312
Y KC A +FE I+ K+L SW SIIS + FG+M + P+ +
Sbjct: 220 YGKCKHTEDALMIFEMIN--EKDLFSWNSIISAHEQCDDHDGTLRLFGKMLGSRVLPDVI 277
Query: 313 TFLSVLNACSHGGLVEEGLNFFDKMV----EECEVLPDIKHYGCLIDMLGRAGRLEQAEK 368
T +VL ACSH + G M+ + E D+ ++DM + G ++ A+
Sbjct: 278 TITAVLPACSHLAALMHGREIHGYMIVNGLGKNENGDDVLLNNAIMDMYAKCGCMKNADI 337
Query: 369 TALGIPSEITDVVVWRTLLGACSFHG 394
+ ++ DV W ++ + HG
Sbjct: 338 IFDLMRNK--DVASWNIMIMGYAMHG 361
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 79/175 (45%), Gaps = 37/175 (21%)
Query: 249 LIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLK 308
LI+ Y++C + A +F D ER N+ ++ +II+GF +G+ + + + RM+ VG+
Sbjct: 16 LINMYSRCNQMEEAVLVFRDPYHER-NVFAYNAIIAGFVANGLAADGFQFYKRMRSVGVM 74
Query: 309 PNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDM-------LGRA- 360
P++ TF V+ AC CE + K +GCL M +G A
Sbjct: 75 PDKFTFPCVVRAC-------------------CEFMEVRKIHGCLFKMGLELNVFVGSAL 115
Query: 361 -------GRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILE 408
E AEK +P DVV+W ++ + G++ V +++ E
Sbjct: 116 VNTYLKVDGTEDAEKVFEELPER--DVVLWNAMINGYTKIGHLNKAVVVFKRMGE 168
>gi|359495698|ref|XP_003635064.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59200, chloroplastic-like [Vitis vinifera]
Length = 650
Score = 237 bits (605), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 138/400 (34%), Positives = 228/400 (57%), Gaps = 15/400 (3%)
Query: 59 QIYTHS-HSPLPPLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVN 117
Q+Y+ H + P D++ + +++ C + G ++H+ K+G S+ V ++
Sbjct: 133 QLYSRMLHDSILP--DNYLMASILKACGSQLALREGREVHSRALKLGLSSNRLVRLRIME 190
Query: 118 MYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGI 177
+Y G L D+ ++F+EMPE ++V VMI+ G +E A ++F + ++ V WT +
Sbjct: 191 LYGKCGELGDARRVFEEMPE-DVVASTVMISSYSDQGLVEEAGAVFSRVRRKDTVCWTAM 249
Query: 178 IDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRG 237
IDG+ R N AL FR M E P+E TI+ VL A Q G ++ + +H Y K
Sbjct: 250 IDGFVRNEEMNRALEAFRGMQG-ENVRPNEFTIVCVLSACSQLGALEIGRWVHSYMRKFE 308
Query: 238 FTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVE 297
++ V N LI+ Y++CG I A +F+++ + ++++++ ++ISG +M+G ++A+E
Sbjct: 309 IE-LNLFVGNALINMYSRCGSIDEAQTVFDEM--KDRDVITYNTMISGLSMNGKSRQAIE 365
Query: 298 NFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDML 357
F M L+P VTF+ VLNACSHGGLV+ G F M + V P I+HYGC++D+L
Sbjct: 366 LFRVMIGRRLRPTNVTFVGVLNACSHGGLVDFGFKIFHSMTRDYGVEPQIEHYGCMVDLL 425
Query: 358 GRAGRLEQAE---KTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYG 414
GR GRLE+A +T P D ++ TLL AC H N+E+GE+V + + + +
Sbjct: 426 GRVGRLEEAYDLIRTMKMTP----DHIMLGTLLSACKMHKNLELGEQVAKVLEDRGQADS 481
Query: 415 GDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
G YVL+ ++ A G++ +A ++R M E K PGCS +
Sbjct: 482 GTYVLLSHVYASSGKWKEAAQVRAKMKEAGMQKEPGCSSI 521
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 80/186 (43%), Gaps = 22/186 (11%)
Query: 227 QLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGF 286
QLI + F F+ L+ + +KC I AS++F+ N+ +T++I GF
Sbjct: 71 QLIRNGHSQDPFMVFE------LLRSCSKCHAIDYASRIFQ--YTHNPNVYLYTALIDGF 122
Query: 287 AMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVE---ECEV 343
G +A++ + RM + P+ S+L AC + EG + ++
Sbjct: 123 VSSGNYFDAIQLYSRMLHDSILPDNYLMASILKACGSQLALREGREVHSRALKLGLSSNR 182
Query: 344 LPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMG---- 399
L ++ ++++ G+ G L A + +P DVV ++ + S G VE
Sbjct: 183 LVRLR----IMELYGKCGELGDARRVFEEMPE---DVVASTVMISSYSDQGLVEEAGAVF 235
Query: 400 ERVTRK 405
RV RK
Sbjct: 236 SRVRRK 241
>gi|296089484|emb|CBI39303.3| unnamed protein product [Vitis vinifera]
Length = 723
Score = 237 bits (605), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 141/380 (37%), Positives = 203/380 (53%), Gaps = 36/380 (9%)
Query: 75 FTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDE 134
FT+S +++ C+T+ G Q+HA I K QS ++ ALV +Y G ++D K F
Sbjct: 251 FTFSSILKACSTIEAFECGKQIHAQIFKYNLQSDEFIGNALVELYSLSGSIEDGLKCFHS 310
Query: 135 MPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALF 194
P+ ++V+W +I G V+ G+ E +LF E+ LF
Sbjct: 311 TPKLDVVSWTSLIVGHVQNGQFEGGLTLFHEL--------------------------LF 344
Query: 195 RKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYA 254
+P E TI +L A VKS + IH Y K G F I + N I YA
Sbjct: 345 SG------RKPDEFTISIMLSACANLAAVKSGEQIHAYAIKTGIGNFTI-IQNSQICMYA 397
Query: 255 KCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTF 314
KCG I SA+ F++ + ++VSW+ +IS A HG KEAV+ F M+ G+ PN +TF
Sbjct: 398 KCGDIDSANMTFKE--TKNPDIVSWSVMISSNAQHGCAKEAVDLFELMKGSGIAPNHITF 455
Query: 315 LSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIP 374
L VL ACSHGGLVEEGL +F+ M ++ + P++KH C++D+LGRAGRL +AE +
Sbjct: 456 LGVLVACSHGGLVEEGLRYFEIMKKDHGITPNVKHSACIVDLLGRAGRLAEAESFIMDSG 515
Query: 375 SEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAE 434
E D V+WR+LL AC H + G+RV +++E+E YVL+YNI G A
Sbjct: 516 FE-GDPVMWRSLLSACRVHKATDTGKRVAERVIELEPEAAASYVLLYNIYNDAGIQMPAT 574
Query: 435 RLRRVMDERNAFKVPGCSLV 454
+R +M +R K PG S +
Sbjct: 575 EIRNLMKDRGVKKEPGLSWI 594
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 91/339 (26%), Positives = 146/339 (43%), Gaps = 53/339 (15%)
Query: 72 FDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKL 131
D FT+S + C LG +HA+I+ G V + +L++MY
Sbjct: 39 LDKFTFSNALSVCGRTLDLRLGRLIHALITVSGLGGPVLLTNSLIDMYC----------- 87
Query: 132 FDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEAL 191
K G +++AR +FE + VSW +I GY R+ ++E L
Sbjct: 88 --------------------KCGRIDWARLVFESADELDSVSWNSLIAGYVRIGSNDEML 127
Query: 192 ALFRKMVACEYTEPSEITILAVLPAIWQN--GDVKSCQLIHGYGEKRGFTAFDIRVLNCL 249
L KM+ + + + L A N ++ +++HG K G D+ V L
Sbjct: 128 RLLVKMLR-HGLNLNSYALGSALKACGSNFSSSIECGKMLHGCAVKLGLD-LDVVVGTAL 185
Query: 250 IDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGF-AMHGM----GKEAVENFGRMQK 304
+DTYAK G + A+K+F+ + N+V + ++I+GF M M EA+ F MQ
Sbjct: 186 LDTYAKIGDLEDATKIFK--LMPDPNVVMYNAMIAGFLQMETMADEFANEAMYLFFEMQS 243
Query: 305 VGLKPNRVTFLSVLNACSHGGLVEEG----LNFFDKMVEECEVLPDIKHYGCLIDMLGRA 360
G+KP+ TF S+L ACS E G F ++ E + + L+++ +
Sbjct: 244 RGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQSDEFIGN-----ALVELYSLS 298
Query: 361 GRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMG 399
G +E K P DVV W +L+ +G E G
Sbjct: 299 GSIEDGLKCFHSTPK--LDVVSWTSLIVGHVQNGQFEGG 335
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 70/233 (30%), Positives = 103/233 (44%), Gaps = 23/233 (9%)
Query: 166 MPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKS 225
MP RNVVSW +I GYT+M +E + LF++ + + T L + D++
Sbjct: 1 MPKRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDL-RLDKFTFSNALSVCGRTLDLRL 59
Query: 226 CQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISG 285
+LIH G + + N LID Y KCG I A +FE S + + VSW S+I+G
Sbjct: 60 GRLIHALITVSGLGG-PVLLTNSLIDMYCKCGRIDWARLVFE--SADELDSVSWNSLIAG 116
Query: 286 FAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFD-----KMVEE 340
+ G E + +M + GL N S L AC G NF KM+
Sbjct: 117 YVRIGSNDEMLRLLVKMLRHGLNLNSYALGSALKAC--------GSNFSSSIECGKMLHG 168
Query: 341 CEVL----PDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGA 389
C V D+ L+D + G LE A K +P +VV++ ++
Sbjct: 169 CAVKLGLDLDVVVGTALLDTYAKIGDLEDATKIFKLMPD--PNVVMYNAMIAG 219
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 81/334 (24%), Positives = 140/334 (41%), Gaps = 53/334 (15%)
Query: 72 FDSFTYSFLIRTCAT--LSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSS 129
+S+ ++ C + S G LH K+G V V TAL++ Y
Sbjct: 140 LNSYALGSALKACGSNFSSSIECGKMLHGCAVKLGLDLDVVVGTALLDTYA--------- 190
Query: 130 KLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNR--- 186
K G+LE A +F+ MP NVV + +I G+ +M
Sbjct: 191 ----------------------KIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMAD 228
Query: 187 --SNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIR 244
+NEA+ LF +M + +PSE T ++L A + + IH K + D
Sbjct: 229 EFANEAMYLFFEMQS-RGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQS-DEF 286
Query: 245 VLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQK 304
+ N L++ Y+ G I K F S + ++VSWTS+I G +G + + F +
Sbjct: 287 IGNALVELYSLSGSIEDGLKCFH--STPKLDVVSWTSLIVGHVQNGQFEGGLTLFHELLF 344
Query: 305 VGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCL----IDMLGRA 360
G KP+ T +L+AC++ V+ G + + + I ++ + I M +
Sbjct: 345 SGRKPDEFTISIMLSACANLAAVKSG-----EQIHAYAIKTGIGNFTIIQNSQICMYAKC 399
Query: 361 GRLEQAEKTALGIPSEITDVVVWRTLLGACSFHG 394
G ++ A T ++ D+V W ++ + + HG
Sbjct: 400 GDIDSANMTFK--ETKNPDIVSWSVMISSNAQHG 431
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 83/217 (38%), Gaps = 33/217 (15%)
Query: 73 DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLF 132
D FT S ++ CA L+ G Q+HA K G + + + + MY G + ++ F
Sbjct: 350 DEFTISIMLSACANLAAVKSGEQIHAYAIKTGIGNFTIIQNSQICMYAKCGDIDSANMTF 409
Query: 133 DEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALA 192
E ++V+W+VMI+ + G + A LFE M +
Sbjct: 410 KETKNPDIVSWSVMISSNAQHGCAKEAVDLFELMKGSGIA-------------------- 449
Query: 193 LFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDT 252
P+ IT L VL A G V+ +K +++ C++D
Sbjct: 450 ------------PNHITFLGVLVACSHGGLVEEGLRYFEIMKKDHGITPNVKHSACIVDL 497
Query: 253 YAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMH 289
+ G + A D E + V W S++S +H
Sbjct: 498 LGRAGRLAEAESFIMDSGFE-GDPVMWRSLLSACRVH 533
>gi|359483031|ref|XP_002271968.2| PREDICTED: pentatricopeptide repeat-containing protein At4g02750
[Vitis vinifera]
Length = 788
Score = 237 bits (605), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 128/356 (35%), Positives = 212/356 (59%), Gaps = 6/356 (1%)
Query: 99 VISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEF 158
+ +++ + V NT ++ Y G + ++ LF +M ++++V+WN M+ + G+++
Sbjct: 348 IFNQISIRDVVCWNT-MIAGYSQCGRMDEALHLFKQMVKKDIVSWNTMVASYAQVGQMDA 406
Query: 159 ARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIW 218
A +FEEM +N+VSW +I G T+ +AL F ++ E +P + T L +
Sbjct: 407 AIKIFEEMKEKNIVSWNSLISGLTQNGSYLDALKSF-MLMGHEGQKPDQSTFACGLSSCA 465
Query: 219 QNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVS 278
++ + +H K G+ A D+ V N LI YAKCG I SA LF+DI + ++VS
Sbjct: 466 HLAALQVGKQLHQLVMKSGY-ATDLFVSNALITMYAKCGSISSAELLFKDI--DHFDVVS 522
Query: 279 WTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMV 338
W S+I+ +A++G G+EA++ F +M+ G+ P+ VTF+ +L+ACSH GL+++GL F MV
Sbjct: 523 WNSLIAAYALNGNGREALKLFHKMEVEGVAPDEVTFVGILSACSHVGLIDQGLKLFKCMV 582
Query: 339 EECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEM 398
+ + P +HY C++D+LGRAGRLE+A + G+ + +W LLGAC HGN+E+
Sbjct: 583 QAYNIEPLAEHYACMVDLLGRAGRLEEAFQLVRGMKIN-ANAGIWGALLGACRIHGNLEL 641
Query: 399 GERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
+ K+LE E +YVL+ N+ A GR+ + R+RR+M E+ A K PG S +
Sbjct: 642 AKFAAEKLLEFEPHKTSNYVLLSNMQAEAGRWDEVARVRRLMKEKGAEKQPGWSWI 697
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 101/375 (26%), Positives = 168/375 (44%), Gaps = 71/375 (18%)
Query: 115 LVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVV-- 172
+V+ +V +G L S + F+++P N V+W M+ G ++G++ AR LF++MP RNVV
Sbjct: 208 MVDGFVEVGDLNSSWEFFEKIPNPNTVSWVTMLCGFARFGKIAEARRLFDQMPIRNVVAW 267
Query: 173 -----------------------------SWTGIIDGYTRMNRSNEALALFRKMVACEYT 203
SWT +I+GY RM + +EA L +M Y
Sbjct: 268 NAMIAAYVQNCHVDEAISLFMEMPEKNSISWTTVINGYVRMGKLDEARQLLNQM---PYR 324
Query: 204 EPSEITILAVLPAIWQNGDVKSCQ----------------LIHGYGE----------KRG 237
+ T A++ QN + + +I GY + +
Sbjct: 325 NVAAQT--AMISGYVQNKRMDDARQIFNQISIRDVVCWNTMIAGYSQCGRMDEALHLFKQ 382
Query: 238 FTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVE 297
DI N ++ +YA+ G + +A K+FE++ + KN+VSW S+ISG +G +A++
Sbjct: 383 MVKKDIVSWNTMVASYAQVGQMDAAIKIFEEM--KEKNIVSWNSLISGLTQNGSYLDALK 440
Query: 298 NFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDML 357
+F M G KP++ TF L++C+H ++ G ++V + D+ LI M
Sbjct: 441 SFMLMGHEGQKPDQSTFACGLSSCAHLAALQVGKQLH-QLVMKSGYATDLFVSNALITMY 499
Query: 358 GRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEME-RGYGGD 416
+ G + AE I + DVV W +L+ A + +GN G + +ME G D
Sbjct: 500 AKCGSISSAELLFKDI--DHFDVVSWNSLIAAYALNGN---GREALKLFHKMEVEGVAPD 554
Query: 417 YVLMYNILAGVGRFG 431
V IL+ G
Sbjct: 555 EVTFVGILSACSHVG 569
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 100/398 (25%), Positives = 172/398 (43%), Gaps = 75/398 (18%)
Query: 105 FQSHVYVNT----ALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFAR 160
FQ + NT ++++ + G + D+ +LFD MP+RN+V+WN MI + +E AR
Sbjct: 38 FQHMTHKNTVTHNSMISAFAKNGRISDARQLFDGMPQRNIVSWNSMIAAYLHNDRVEEAR 97
Query: 161 SLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKM------VACE-----YTEPSEIT 209
LF++MP R++ SWT +I YTR +A LF + V C Y + +
Sbjct: 98 QLFDKMPTRDLYSWTLMITCYTRNGELAKARNLFNLLPYKWNPVCCNAMVAGYAKNRQFD 157
Query: 210 ----ILAVLPAIWQNGDVKSCQLIHGY---GEKR-GFTAF------DIRVLNCLIDTYAK 255
+ +PA V ++ GY GE R G F D+ N ++D + +
Sbjct: 158 EARRLFDAMPA---KDLVSWNSMLTGYTRNGEMRLGLQFFEEMAERDVVSWNLMVDGFVE 214
Query: 256 CGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFL 315
G + S+ + FE I N VSW +++ GFA G EA F +M N V +
Sbjct: 215 VGDLNSSWEFFEKIP--NPNTVSWVTMLCGFARFGKIAEARRLFDQMP----IRNVVAWN 268
Query: 316 SVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPS 375
+++ A V+E ++ F +M E+ + + +I+ R G+L++A + +P
Sbjct: 269 AMIAAYVQNCHVDEAISLFMEMPEKNSI-----SWTTVINGYVRMGKLDEARQLLNQMPY 323
Query: 376 E-----------------------------ITDVVVWRTLLGACSFHGNVEMGERVTRKI 406
I DVV W T++ S G ++ + +++
Sbjct: 324 RNVAAQTAMISGYVQNKRMDDARQIFNQISIRDVVCWNTMIAGYSQCGRMDEALHLFKQM 383
Query: 407 LEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERN 444
++ + V Y A VG+ A ++ M E+N
Sbjct: 384 VKKDIVSWNTMVASY---AQVGQMDAAIKIFEEMKEKN 418
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 70/137 (51%), Gaps = 4/137 (2%)
Query: 73 DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLF 132
D T++ + +CA L+ +G QLH ++ K G+ + ++V+ AL+ MY G + + LF
Sbjct: 453 DQSTFACGLSSCAHLAALQVGKQLHQLVMKSGYATDLFVSNALITMYAKCGSISSAELLF 512
Query: 133 DEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNV----VSWTGIIDGYTRMNRSN 188
++ ++V+WN +I G A LF +M V V++ GI+ + + +
Sbjct: 513 KDIDHFDVVSWNSLIAAYALNGNGREALKLFHKMEVEGVAPDEVTFVGILSACSHVGLID 572
Query: 189 EALALFRKMVACEYTEP 205
+ L LF+ MV EP
Sbjct: 573 QGLKLFKCMVQAYNIEP 589
>gi|242054925|ref|XP_002456608.1| hypothetical protein SORBIDRAFT_03g039300 [Sorghum bicolor]
gi|241928583|gb|EES01728.1| hypothetical protein SORBIDRAFT_03g039300 [Sorghum bicolor]
Length = 458
Score = 237 bits (604), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 126/382 (32%), Positives = 213/382 (55%), Gaps = 5/382 (1%)
Query: 73 DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLF 132
+ FT+ ++R+ L P G QLHA +K+G S+V+V +AL++ Y +G ++++ +
Sbjct: 40 NEFTFGTVLRSATALRAPRAGVQLHACAAKLGLCSNVFVGSALLDHYAKMGAMREAHGVL 99
Query: 133 DEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALA 192
D+ E N+V++ +I GL+K G + A LF MP RNVVSW +I G ++ S EA+
Sbjct: 100 DDTREPNVVSYTALIAGLLKNGMFDEADRLFRRMPERNVVSWNAMIGGCSQAGLSEEAVN 159
Query: 193 LFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDT 252
LF +M E P+E T VL ++ G + + +H K D+ + N L+
Sbjct: 160 LFLEMCR-EGVTPNESTFPCVLTSVANAGALGVGRSVHASAIKF-LGKLDVYIGNSLVSF 217
Query: 253 YAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRV 312
YA+CG + + F+ ++ RKN+VSW ++I G+A +G G+EA++ + M+ GLKP+ V
Sbjct: 218 YARCGSLEDSVLAFKKMN--RKNVVSWNALICGYAQNGKGEEALDAYRMMRATGLKPDNV 275
Query: 313 TFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALG 372
T L +L C+H GLV+EG F E + +HY C++D+L RA R + A++
Sbjct: 276 TLLGLLFGCNHAGLVDEGYALFKTTEMEQPGILKPEHYACVVDLLSRAKRFDNAKRFLEE 335
Query: 373 IPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGD 432
+P E + W+ L+G C H N E+ E V ++I ++ Y+L+ N+ + G +
Sbjct: 336 LPFE-PGIGFWKALVGGCQIHWNRELAESVAKRIHALDPKDTSSYILLSNVYSASGSWQS 394
Query: 433 AERLRRVMDERNAFKVPGCSLV 454
+RR + E+ ++ GCS +
Sbjct: 395 VSMIRREIKEKGLKRITGCSWI 416
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/198 (32%), Positives = 103/198 (52%), Gaps = 9/198 (4%)
Query: 166 MPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKS 225
MP R+VVS T I TR R +ALALF +++A + P+E T VL + ++
Sbjct: 1 MPHRDVVSATAAIGALTRRGRHRDALALFSQVLA-DGVAPNEFTFGTVLRSATALRAPRA 59
Query: 226 CQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISG 285
+H K G + ++ V + L+D YAK G + A + +D N+VS+T++I+G
Sbjct: 60 GVQLHACAAKLGLCS-NVFVGSALLDHYAKMGAMREAHGVLDD--TREPNVVSYTALIAG 116
Query: 286 FAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLP 345
+GM EA F RM + N V++ +++ CS GL EE +N F +M E V P
Sbjct: 117 LLKNGMFDEADRLFRRMP----ERNVVSWNAMIGGCSQAGLSEEAVNLFLEMCRE-GVTP 171
Query: 346 DIKHYGCLIDMLGRAGRL 363
+ + C++ + AG L
Sbjct: 172 NESTFPCVLTSVANAGAL 189
>gi|449470104|ref|XP_004152758.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
gi|449504088|ref|XP_004162249.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
Length = 797
Score = 237 bits (604), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 136/391 (34%), Positives = 215/391 (54%), Gaps = 23/391 (5%)
Query: 73 DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSH----VYVNTALVNMYVSLGFLKDS 128
D TY+ +I CA LG Q+HA I K + V L+ +Y G + +
Sbjct: 288 DESTYTSVISACADGGFFLLGKQVHAYILKNELNPDRDFLLSVGNTLITLYWKYGKVDGA 347
Query: 129 SKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSN 188
K+F EMP ++++TWN +++G V G +E A+S F +MP +N+++WT +I G +
Sbjct: 348 RKIFYEMPVKDIITWNTLLSGYVNAGRMEEAKSFFAQMPEKNLLTWTVMISGLAQNGFGE 407
Query: 189 EALALFRKMVACEYTEPSE------ITILAVLPAIWQNGDVKSCQLIH-GYGEKRGFTAF 241
+AL LF +M Y EP++ IT +VL A+ +NG Q++H G+
Sbjct: 408 QALKLFNQMKLDGY-EPNDYAFAGAITACSVLGAL-ENGRQLHAQIVHLGHDST------ 459
Query: 242 DIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGR 301
+ V N +I YA+CG + +A +F +++ + VSW S+I+ HG G +A+E + +
Sbjct: 460 -LSVGNAMITMYARCGIVEAARTMF--LTMPFVDPVSWNSMIAALGQHGHGVKAIELYEQ 516
Query: 302 MQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAG 361
M K G+ P+R TFL+VL+ACSH GLVEEG +F+ M+E + P HY +ID+ RAG
Sbjct: 517 MLKEGILPDRRTFLTVLSACSHAGLVEEGNRYFNSMLENYGIAPGEDHYARMIDLFCRAG 576
Query: 362 RLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMY 421
+ A+ +P E +W LL C HGN+++G K+ ++ + G YVL+
Sbjct: 577 KFSDAKNVIDSMPFE-ARAPIWEALLAGCRTHGNMDLGIEAAEKLFKLIPQHDGTYVLLS 635
Query: 422 NILAGVGRFGDAERLRRVMDERNAFKVPGCS 452
N+ A +GR+ D R R++M +R K P CS
Sbjct: 636 NMYASLGRWNDVARTRKLMRDRGVKKEPACS 666
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 124/486 (25%), Positives = 194/486 (39%), Gaps = 97/486 (19%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNL 92
+N ++ YS A L++ ++ + P D FT++ ++ + +
Sbjct: 114 FYNAMITGYSHMNDGHSAIELFRAMRW------ANFQP--DDFTFASVLSASTLIFYDER 165
Query: 93 GT-QLHAVISKVGFQSHVYVNTALVNMYVSLGF---------LKDSSKLFDEMPERNLVT 142
Q+H + K G + V AL+++YV + + KLFDEMP+RN
Sbjct: 166 QCGQMHGTVVKFGIEIFPAVLNALLSVYVKCASSPLVSSSSLMASARKLFDEMPKRNEFI 225
Query: 143 WNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEY 202
W +ITG V+ G+L AR + + M + ++W +I GY +AL LFRKM
Sbjct: 226 WTTLITGYVRNGDLTGAREILDTMTEQPGIAWNAMISGYLHHGLFEDALTLFRKMRLLG- 284
Query: 203 TEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTA---FDIRVLNCLIDTYAKCGCI 259
+ E T +V+ A G + +H Y K F + V N LI Y K G +
Sbjct: 285 VQVDESTYTSVISACADGGFFLLGKQVHAYILKNELNPDRDFLLSVGNTLITLYWKYGKV 344
Query: 260 FSASKLFEDISVE-----------------------------RKNLVSWTSIISGFAMHG 290
A K+F ++ V+ KNL++WT +ISG A +G
Sbjct: 345 DGARKIFYEMPVKDIITWNTLLSGYVNAGRMEEAKSFFAQMPEKNLLTWTVMISGLAQNG 404
Query: 291 MGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHY 350
G++A++ F +M+ G +PN F + ACS G +E G ++V +
Sbjct: 405 FGEQALKLFNQMKLDGYEPNDYAFAGAITACSVLGALENGRQLHAQIVHLGHD-STLSVG 463
Query: 351 GCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWR-------------------------- 384
+I M R G +E A L +P D V W
Sbjct: 464 NAMITMYARCGIVEAARTMFLTMP--FVDPVSWNSMIAALGQHGHGVKAIELYEQMLKEG 521
Query: 385 ---------TLLGACSFHGNVEMGERVTRKILEMERGYG-----GDYVLMYNILAGVGRF 430
T+L ACS G VE G R +LE YG Y M ++ G+F
Sbjct: 522 ILPDRRTFLTVLSACSHAGLVEEGNRYFNSMLE---NYGIAPGEDHYARMIDLFCRAGKF 578
Query: 431 GDAERL 436
DA+ +
Sbjct: 579 SDAKNV 584
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 97/358 (27%), Positives = 168/358 (46%), Gaps = 54/358 (15%)
Query: 87 LSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVM 146
LS +L +H + GF+ ++ L+++Y + KLFDE+P+ +++ +
Sbjct: 26 LSSYSLARTVHGHVIASGFKLRGHIVNRLIDIYWKSSDFVYARKLFDEIPQPDVIARTTL 85
Query: 147 ITGLVKWGELEFARSLFEEMPC--RNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTE 204
IT G L+ AR +F E P R+ V + +I GY+ MN + A+ LFR M + +
Sbjct: 86 ITAYSALGNLKMAREIFNETPLDMRDTVFYNAMITGYSHMNDGHSAIELFRAMRWANF-Q 144
Query: 205 PSEITILAVLPA---IWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCG---- 257
P + T +VL A I+ D + C +HG K G F VLN L+ Y KC
Sbjct: 145 PDDFTFASVLSASTLIFY--DERQCGQMHGTVVKFGIEIFPA-VLNALLSVYVKCASSPL 201
Query: 258 -----CIFSASKLFE---------------------DISVERKNL--------VSWTSII 283
+ SA KLF+ D++ R+ L ++W ++I
Sbjct: 202 VSSSSLMASARKLFDEMPKRNEFIWTTLITGYVRNGDLTGAREILDTMTEQPGIAWNAMI 261
Query: 284 SGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEV 343
SG+ HG+ ++A+ F +M+ +G++ + T+ SV++AC+ GG G +++ E+
Sbjct: 262 SGYLHHGLFEDALTLFRKMRLLGVQVDESTYTSVISACADGGFFLLGKQVHAYILKN-EL 320
Query: 344 LPD----IKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVE 397
PD + LI + + G+++ A K +P + D++ W TLL G +E
Sbjct: 321 NPDRDFLLSVGNTLITLYWKYGKVDGARKIFYEMP--VKDIITWNTLLSGYVNAGRME 376
>gi|357466867|ref|XP_003603718.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355492766|gb|AES73969.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 629
Score = 237 bits (604), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 150/491 (30%), Positives = 259/491 (52%), Gaps = 52/491 (10%)
Query: 1 MHILQNSQTPN-NITTQIHSHLLTTNSLLHHSQLFNTLLHFYSLAESPQKAFLLYKQLQQ 59
+H+LQ Q T QIH+H + N+L S + + +L F+ A SP+ F + +
Sbjct: 26 LHLLQQWQNLTMKQTKQIHAHAIA-NNLTRFSYISSRILAFF--AASPRGDF---RYAET 79
Query: 60 IYTHSHSPLPPLFD--------------------------------SFTYSFLIRTCATL 87
++TH P P +FD S T++ L+++C TL
Sbjct: 80 LFTHM--PNPNIFDYNSIITSYTTNSQFDKSLSVFTKMLNMNIRPNSHTFTTLVKSCVTL 137
Query: 88 SHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMI 147
S Q+ + K G S VY ++++N++ G + + ++FDE RN+V W ++
Sbjct: 138 SSLE---QVFTLTMKSGNSSDVYFVSSVINVFSKHGAIHLARQVFDESSNRNVVCWTSLV 194
Query: 148 TGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEP-- 205
+G G + R +F++MP RN S + ++ GY R + +E + LFR++ +
Sbjct: 195 SGYCSCGLVNEVRDVFDKMPQRNEASNSAMVSGYVRNSFFSEGVQLFRELKKKDKGRARV 254
Query: 206 --SEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSAS 263
+ +++VL A G + + IH Y E+ G +D+ + LID YAKCG + A
Sbjct: 255 KFNGALLVSVLNACTVMGAFEEGKWIHSYVEENGL-EYDLELGTALIDFYAKCGWVKDAE 313
Query: 264 KLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSH 323
K+F+ + V K++ +W+++I G A++G K A+E F +M+KVG KPN VTF+ VL AC+H
Sbjct: 314 KVFDKMLV--KDVATWSAMILGLAINGNNKMALELFEKMEKVGPKPNEVTFVGVLTACNH 371
Query: 324 GGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVW 383
L E F M E+ + P I+HYGC++D+L R+G++++A + E D +W
Sbjct: 372 KSLFGESSRLFGIMSEKYNITPSIEHYGCIVDILARSGQVKKALIFINSMHIE-PDGAIW 430
Query: 384 RTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDER 443
+LL C HG+ E+G++V + ++E + + G YVL+ N+ A +G++ +R++M +R
Sbjct: 431 GSLLNGCLMHGHYELGQKVGKYLIEFDPEHSGRYVLLANMYANMGKWEGVSEVRKLMKDR 490
Query: 444 NAFKVPGCSLV 454
V G S +
Sbjct: 491 GVVIVYGWSFI 501
>gi|125601229|gb|EAZ40805.1| hypothetical protein OsJ_25283 [Oryza sativa Japonica Group]
Length = 492
Score = 237 bits (604), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 128/346 (36%), Positives = 199/346 (57%), Gaps = 5/346 (1%)
Query: 109 VYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPC 168
V++ ++ YVS + ++ K+FD MP R+LV+WN MI G GE+ AR +F+
Sbjct: 23 VFLCNVMLAAYVSRSEVAEARKVFDGMPMRDLVSWNTMIHGYAMRGEVGLAREIFDGTED 82
Query: 169 RNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQL 228
R+ SW+ +I Y + RS EAL L+R+M A P IT+++V+ A G +
Sbjct: 83 RDAFSWSSMISAYAKSRRSKEALELWREMHAASII-PDCITLVSVVSACSDLGALAVGAE 141
Query: 229 IHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAM 288
+H + E D+++ LID YAKCG I SA ++F+ + K++ +W+S+I G A
Sbjct: 142 VHRFVESNRIE-LDLKLGTALIDMYAKCGDIESAQRVFDRMP--EKDVQTWSSMIIGLAN 198
Query: 289 HGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIK 348
HG+G E++ F +M G+KPN VTF+ VL AC+H GLV EG +F M E + P ++
Sbjct: 199 HGLGHESLSLFSKMISEGMKPNGVTFVGVLIACTHVGLVSEGKKYFRSMNEVHGIEPTVE 258
Query: 349 HYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILE 408
HYGC++D+LGR+G +E+A + + E D ++WR LLGAC H NVE+ E K+
Sbjct: 259 HYGCMVDLLGRSGHVEEARQLIRSMTFE-PDTIIWRALLGACRIHKNVEIAEEAMAKLRV 317
Query: 409 MERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
++ G YVL+ NI A + +R+ + N ++PG S +
Sbjct: 318 LDPLGDGHYVLLSNIYAQANSWEGVAEMRKTIRRDNIQRIPGRSSI 363
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/274 (20%), Positives = 119/274 (43%), Gaps = 49/274 (17%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+++++ Y+ + ++A L++++ H+ S +P D T ++ C+ L +G
Sbjct: 88 WSSMISAYAKSRRSKEALELWREM-----HAASIIP---DCITLVSVVSACSDLGALAVG 139
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
++H + + + + TAL++MY G ++ + ++FD MPE+++ TW+ MI GL
Sbjct: 140 AEVHRFVESNRIELDLKLGTALIDMYAKCGDIESAQRVFDRMPEKDVQTWSSMIIGLANH 199
Query: 154 GELEFARSLFEEMPCR----NVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEIT 209
G + SLF +M N V++ G++ T + +E FR M EP+
Sbjct: 200 GLGHESLSLFSKMISEGMKPNGVTFVGVLIACTHVGLVSEGKKYFRSMNEVHGIEPT--- 256
Query: 210 ILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDI 269
+ YG C++D + G + A +L +
Sbjct: 257 -------------------VEHYG--------------CMVDLLGRSGHVEEARQLIRSM 283
Query: 270 SVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQ 303
+ E ++ W +++ +H + A E +++
Sbjct: 284 TFEPDTII-WRALLGACRIHKNVEIAEEAMAKLR 316
>gi|242061934|ref|XP_002452256.1| hypothetical protein SORBIDRAFT_04g022510 [Sorghum bicolor]
gi|241932087|gb|EES05232.1| hypothetical protein SORBIDRAFT_04g022510 [Sorghum bicolor]
Length = 590
Score = 237 bits (604), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 134/357 (37%), Positives = 205/357 (57%), Gaps = 9/357 (2%)
Query: 102 KVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDE--MPERNLVTWNVMITGLVKWGELEFA 159
K G +H V L+ +Y +LG L D+ ++FD ++V+WN M++G K G+LE A
Sbjct: 109 KCGALAHPVVTNCLLKLYCALGMLPDARRVFDTSGATALDVVSWNTMVSGYGKCGDLEAA 168
Query: 160 RSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQ 219
R +F MP R +VSW+ +ID R +EAL +F +M + +P + +++VL
Sbjct: 169 REVFVRMPERGLVSWSAMIDACVRTGEFSEALRVFDQMTGNGF-KPDAVVLVSVLKTCAH 227
Query: 220 NGDVKSCQLIHGY--GEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLV 277
G ++ + +H + E+ G ++ + L+D Y KCGC+ A +F+ V+ ++V
Sbjct: 228 LGALERGRWVHRFLKAERLGGRPGNVMLETALVDMYCKCGCMNEAWWVFD--GVQSHDVV 285
Query: 278 SWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKM 337
W ++I G AM+G GK A+E F RM G PN TF+ L AC H G V+EG + F M
Sbjct: 286 LWNAMIGGLAMNGHGKRALELFRRMLDKGFVPNESTFVVALCACIHTGRVDEGEDVFRSM 345
Query: 338 VEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVE 397
+ + P +HYGCL D+LGRAG LE+AE L +P E W L+ +C H NV
Sbjct: 346 RDH-GIEPRREHYGCLADLLGRAGLLEEAEGVLLDMPME-PHASQWGALMSSCLMHNNVG 403
Query: 398 MGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
+GERV +K++E+E GG YV ++N+ A G + DA+ LR++M+ER A K G S +
Sbjct: 404 VGERVGKKLIELEPDDGGRYVALFNLYAVNGLWEDAKALRKMMEERGAKKETGLSFI 460
>gi|255578965|ref|XP_002530335.1| Bipolar kinesin KRP-130, putative [Ricinus communis]
gi|223530139|gb|EEF32051.1| Bipolar kinesin KRP-130, putative [Ricinus communis]
Length = 1530
Score = 237 bits (604), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 141/459 (30%), Positives = 242/459 (52%), Gaps = 61/459 (13%)
Query: 16 QIHSHLLTTNSLLHHS-QLFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLF-- 72
Q+H+ L+TTNS+L+++ + N LL+ Y + A+ L+ ++ Q S S + F
Sbjct: 1100 QLHA-LITTNSVLYNNLTVANKLLYVYVHHKCLTDAYALFDEMPQKNPVSWSIMIGGFVK 1158
Query: 73 ---------------------DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYV 111
D++T F+I+ C ++G +H V+ K G +V
Sbjct: 1159 VGEFMQCYKTFKELIRNGVQPDNYTLPFVIKACRDTVALDMGRLIHCVVLKYGLHLDHFV 1218
Query: 112 NTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNV 171
ALV+MY ++D A+ LF+ MP +++
Sbjct: 1219 CAALVDMYAKCKVIED-------------------------------AKLLFDVMPSKDL 1247
Query: 172 VSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHG 231
V+WT +I GY + E+L LF + + P +I +++++ A + G + + +H
Sbjct: 1248 VTWTVMIGGYAECGNAKESLVLFDHLREEGFV-PDKIAMVSIVNACAKLGAMNKARFVHE 1306
Query: 232 YGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGM 291
Y + F+ D+ + +ID YAKCG + SA ++F+++ KN++SW+++I+ + HG
Sbjct: 1307 YVNRNRFS-LDVILGTAMIDMYAKCGDVDSAREIFDNM--HHKNVISWSAMIAAYGYHGQ 1363
Query: 292 GKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYG 351
GK+A+E F M G+ PN +TF+S+L ACSH GLVE+GL M E V PDIKH+
Sbjct: 1364 GKKALELFPMMLSSGILPNNITFVSLLYACSHAGLVEDGLTLLSLMWESFGVRPDIKHHT 1423
Query: 352 CLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMER 411
C++D+LGRAG+L +A + + E D +W +LLGAC H +++ E+ + +LE++
Sbjct: 1424 CMVDLLGRAGQLTEAFRFIENMTVE-KDEGLWSSLLGACRIHKRIDLAEKAAKSLLELQP 1482
Query: 412 GYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPG 450
G+Y+L+ NI A G++ D ++R +M +R K+PG
Sbjct: 1483 QNPGNYILLSNIYANAGQWKDVAKIRDLMTKRKLKKIPG 1521
>gi|242096286|ref|XP_002438633.1| hypothetical protein SORBIDRAFT_10g023240 [Sorghum bicolor]
gi|241916856|gb|EER90000.1| hypothetical protein SORBIDRAFT_10g023240 [Sorghum bicolor]
Length = 529
Score = 237 bits (604), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 138/425 (32%), Positives = 227/425 (53%), Gaps = 22/425 (5%)
Query: 45 ESPQKAFLLYKQLQQIYTH--------------SHSPLPPLFDSFTYSFLIRTCATLSHP 90
E PQ+ +L+ + + Y S P D T + C+
Sbjct: 106 EMPQRFLVLWNMMMRCYIRCGRFTAAVALAEEMERSGATP--DRVTLVTAVTACSRAGDL 163
Query: 91 NLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGL 150
+LG ++ A + V F + V AL++MY G+L+++ K+F +MPERN+++W ++++G
Sbjct: 164 SLGRRIRAYMDGV-FGFSLPVANALLDMYTKNGYLEEAVKMFQQMPERNIISWTILVSGY 222
Query: 151 VKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITI 210
G+L+ AR LF + ++++ WT +I+ + EAL LFR M + EP + T+
Sbjct: 223 AVAGQLDKARMLFYQCTQKDLILWTAMINACVQHGSFEEALTLFRDM-QLQRVEPDKFTV 281
Query: 211 LAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDIS 270
+ +L G + + IH Y E R D + LI+ Y+KCG + + ++F
Sbjct: 282 VTLLTCCANIGALDQGEWIHQYAEGRNMK-IDAVLGTALIEMYSKCGHVDKSLQIFG--R 338
Query: 271 VERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEG 330
++ ++ +WT+II G A +G +A+E F MQ+ KP+ +TF+ VLNAC HGGLV+EG
Sbjct: 339 MQGRDAAAWTAIICGLATNGQASKALELFEEMQRSKTKPDGITFIGVLNACCHGGLVDEG 398
Query: 331 LNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGAC 390
F M E ++ P I+HY CL+++LG AG L +AEK +P + ++ LL AC
Sbjct: 399 RRHFQAMKEIYQIEPRIEHYSCLVNLLGHAGLLYEAEKLIRDMPVNNDTMPLFGALLTAC 458
Query: 391 SFHGNVEMGERVTRKILEMERGYGGDY-VLMYNILAGVGRFGDAERLRRVMDERNAFKVP 449
+GNVEM ER+T++I + + D VLM N+ A R+ ++ R+R M K
Sbjct: 459 KAYGNVEMSERLTKRIAKEDCSQNPDVNVLMSNVYATASRWEESIRVRSKMTHPAVKKTA 518
Query: 450 GCSLV 454
GCS++
Sbjct: 519 GCSMI 523
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 105/387 (27%), Positives = 172/387 (44%), Gaps = 53/387 (13%)
Query: 73 DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLF 132
DS+TY F++R + G ++HA K GF+ Y ++L+ MY LG + + K+F
Sbjct: 45 DSYTYPFVLRAIGVMKLSVEGRKVHAAAVKTGFRWDAYTASSLLEMYTMLGRVDFARKVF 104
Query: 133 DEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALA 192
DEMP+R LV WN+M+ ++ G A +L EE M RS
Sbjct: 105 DEMPQRFLVLWNMMMRCYIRCGRFTAAVALAEE------------------MERSG---- 142
Query: 193 LFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDT 252
P +T++ + A + GD+ + I Y + G F + V N L+D
Sbjct: 143 ----------ATPDRVTLVTAVTACSRAGDLSLGRRIRAYMD--GVFGFSLPVANALLDM 190
Query: 253 YAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRV 312
Y K G + A K+F+ + +N++SWT ++SG+A+ G +A F + + L +
Sbjct: 191 YTKNGYLEEAVKMFQQMP--ERNIISWTILVSGYAVAGQLDKARMLFYQCTQKDL----I 244
Query: 313 TFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAE---KT 369
+ +++NAC G EE L F M + V PD L+ G L+Q E +
Sbjct: 245 LWTAMINACVQHGSFEEALTLFRDMQLQ-RVEPDKFTVVTLLTCCANIGALDQGEWIHQY 303
Query: 370 ALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGR 429
A G +I D V+ L+ S G+V+ ++ R G D I+ G+
Sbjct: 304 AEGRNMKI-DAVLGTALIEMYSKCGHVDKSLQI------FGRMQGRDAAAWTAIICGLAT 356
Query: 430 FGDAERLRRVMDE--RNAFKVPGCSLV 454
G A + + +E R+ K G + +
Sbjct: 357 NGQASKALELFEEMQRSKTKPDGITFI 383
>gi|297609253|ref|NP_001062888.2| Os09g0327200 [Oryza sativa Japonica Group]
gi|255678787|dbj|BAF24802.2| Os09g0327200 [Oryza sativa Japonica Group]
Length = 739
Score = 237 bits (604), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 139/380 (36%), Positives = 202/380 (53%), Gaps = 42/380 (11%)
Query: 109 VYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPC 168
V+ TA+V+ Y G L+++ ++FD MPERN V+WN M+ ++ ++ A+ LF MPC
Sbjct: 255 VFTWTAVVSGYAQNGMLEEARRVFDAMPERNAVSWNAMVAAYIQRRMMDEAKELFNMMPC 314
Query: 169 RNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNG-DVKSCQ 227
RNV SW ++ GY + EA A+F M + ++ A+L A Q G ++ Q
Sbjct: 315 RNVASWNTMLTGYAQAGMLEEAKAVFDTM-----PQKDAVSWAAMLAAYSQGGCSEETLQ 369
Query: 228 LIHGYGE------KRGF-----TAFDIRVLNC----------------------LIDTYA 254
L G + F T DI L C L+ Y
Sbjct: 370 LFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYF 429
Query: 255 KCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTF 314
KCG + A FE++ E +++VSW ++I+G+A HG GKEA+E F M+ KP+ +T
Sbjct: 430 KCGNMEDARNAFEEM--EERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITL 487
Query: 315 LSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIP 374
+ VL ACSH GLVE+G+++F M + V +HY C+ID+LGRAGRL +A +P
Sbjct: 488 VGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMP 547
Query: 375 SEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAE 434
E D +W LLGA H N E+G KI E+E G YVL+ NI A G++ DA
Sbjct: 548 FE-PDSTMWGALLGASRIHRNPELGRSAAEKIFELEPENAGMYVLLSNIYASSGKWRDAR 606
Query: 435 RLRRVMDERNAFKVPGCSLV 454
++R +M+ER KVPG S +
Sbjct: 607 KMRVMMEERGVKKVPGFSWI 626
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 96/393 (24%), Positives = 179/393 (45%), Gaps = 64/393 (16%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCA-------T 86
+NTLLH +++ S A L+ ++ P+ DS TY+ +I + A
Sbjct: 103 YNTLLHALAVSSSLADARGLFDEM------------PVRDSVTYNVMISSHANHGLVSLA 150
Query: 87 LSHPNLGTQLHAVI----------------SKVGFQSH----VYVNTALVNMYVSLGFLK 126
+ +L + AV ++ F S V AL++ YV G +
Sbjct: 151 RHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDVISWNALMSGYVQWGKMS 210
Query: 127 DSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNR 186
++ +LFD MP R++V+WN+M++G + G++ AR LF+ P R+V +WT ++ GY +
Sbjct: 211 EARELFDRMPGRDVVSWNIMVSGYARRGDMVEARRLFDAAPVRDVFTWTAVVSGYAQNGM 270
Query: 187 SNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVL 246
EA +F M E + ++ A++ A Q + + + R ++
Sbjct: 271 LEEARRVFDAM-----PERNAVSWNAMVAAYIQRRMMDEAKELFNMMPCRNVASW----- 320
Query: 247 NCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVG 306
N ++ YA+ G + A +F+ ++ +K+ VSW ++++ ++ G +E ++ F M + G
Sbjct: 321 NTMLTGYAQAGMLEEAKAVFD--TMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCG 378
Query: 307 LKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGC-----LIDMLGRAG 361
NR F VL+ C+ +E G+ +++ + GC L+ M + G
Sbjct: 379 EWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGV------GCFVGNALLAMYFKCG 432
Query: 362 RLEQAEKTALGIPSEITDVVVWRTLLGACSFHG 394
+E A + E DVV W T++ + HG
Sbjct: 433 NMEDARNAFEEM--EERDVVSWNTMIAGYARHG 463
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 91/328 (27%), Positives = 153/328 (46%), Gaps = 27/328 (8%)
Query: 70 PLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSS 129
P + TY+ ++ + L L I + S+ NT L + VS L D+
Sbjct: 65 PRRSTSTYNAMLAGYSANGRLPLAASLFRAIPRPDNYSY---NTLLHALAVS-SSLADAR 120
Query: 130 KLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNE 189
LFDEMP R+ VT+NVMI+ G + AR F+ P ++ VSW G++ Y R R E
Sbjct: 121 GLFDEMPVRDSVTYNVMISSHANHGLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEE 180
Query: 190 ALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCL 249
A LF TE I+ A++ Q G + + + R D+ N +
Sbjct: 181 ARGLFNS-----RTEWDVISWNALMSGYVQWGKMSEARELFDRMPGR-----DVVSWNIM 230
Query: 250 IDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKP 309
+ YA+ G + A +LF+ V +++ +WT+++SG+A +GM +EA F M +
Sbjct: 231 VSGYARRGDMVEARRLFDAAPV--RDVFTWTAVVSGYAQNGMLEEARRVFDAMPER---- 284
Query: 310 NRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKT 369
N V++ +++ A +++E F+ M C ++ + ++ +AG LE+A+
Sbjct: 285 NAVSWNAMVAAYIQRRMMDEAKELFNMM--PCR---NVASWNTMLTGYAQAGMLEEAKAV 339
Query: 370 ALGIPSEITDVVVWRTLLGACSFHGNVE 397
+P + D V W +L A S G E
Sbjct: 340 FDTMPQK--DAVSWAAMLAAYSQGGCSE 365
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 98/228 (42%), Gaps = 38/228 (16%)
Query: 76 TYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEM 135
++ ++ TCA ++ G QLH + + G+ +V AL+ MY G ++D+ F+EM
Sbjct: 385 AFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEM 444
Query: 136 PERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFR 195
ER++V+WN MI GY R EAL +F
Sbjct: 445 EERDVVSWNTMIA-------------------------------GYARHGFGKEALEIF- 472
Query: 196 KMVACEYTEPSEITILAVLPAIWQNGDV-KSCQLIHGYGEKRGFTAFDIRVLNCLIDTYA 254
M+ T+P +IT++ VL A +G V K + G TA C+ID
Sbjct: 473 DMMRTTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHHDFGVTA-KPEHYTCMIDLLG 531
Query: 255 KCGCIFSASKLFEDISVERKNLVSWTSIISGFAMH---GMGKEAVENF 299
+ G + A L +D+ E + + W +++ +H +G+ A E
Sbjct: 532 RAGRLAEAHDLMKDMPFEPDSTM-WGALLGASRIHRNPELGRSAAEKI 578
Score = 39.7 bits (91), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 104/242 (42%), Gaps = 32/242 (13%)
Query: 204 EPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSAS 263
EP I + A + G V + + +R + + N ++ Y+ G + A+
Sbjct: 35 EPEVIRSNKAITAHMRAGRVADAERLFAAMPRRSTSTY-----NAMLAGYSANGRLPLAA 89
Query: 264 KLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNR--VTFLSVLNAC 321
LF ++ R + S+ +++ A+ +A F M P R VT+ ++++
Sbjct: 90 SLFR--AIPRPDNYSYNTLLHALAVSSSLADARGLFDEM------PVRDSVTYNVMISSH 141
Query: 322 SHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEIT--D 379
++ GLV ++FD E+ D + ++ R GR+E+A G+ + T D
Sbjct: 142 ANHGLVSLARHYFDLAPEK-----DAVSWNGMLAAYVRNGRVEEAR----GLFNSRTEWD 192
Query: 380 VVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRV 439
V+ W L+ G V+ G+ + L +R G D V +++G R GD RR+
Sbjct: 193 VISWNALMS-----GYVQWGKMSEAREL-FDRMPGRDVVSWNIMVSGYARRGDMVEARRL 246
Query: 440 MD 441
D
Sbjct: 247 FD 248
>gi|62321090|dbj|BAD94184.1| hypothetical protein [Arabidopsis thaliana]
Length = 577
Score = 237 bits (604), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 143/454 (31%), Positives = 237/454 (52%), Gaps = 47/454 (10%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNL 92
++N L + P ++ LY ++ + S SP S+TYS L++ + S
Sbjct: 93 VYNALFKGFVTCSHPIRSLELYVRMLR---DSVSP-----SSYTYSSLVKASSFASR--F 142
Query: 93 GTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTW--------- 143
G L A I K GF HV + T L++ Y + G ++++ K+FDEMPER+ + W
Sbjct: 143 GESLQAHIWKFGFGFHVKIQTTLIDFYSATGGIREARKVFDEMPERDDIAWTTMVSAYRR 202
Query: 144 ----------------------NVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGY 181
N +I G + G LE A SLF +MP ++++SWT +I GY
Sbjct: 203 VLDMDSANSLANQMSEKNEATSNCLINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGY 262
Query: 182 TRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAF 241
++ R EA+A+F KM+ E P E+T+ V+ A G ++ + +H Y + GF
Sbjct: 263 SQNKRYREAIAVFYKMME-EGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFV-L 320
Query: 242 DIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGR 301
D+ + + L+D Y+KCG + A +F ++ +KNL W SII G A HG +EA++ F +
Sbjct: 321 DVYIGSALVDMYSKCGSLERALLVF--FNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAK 378
Query: 302 MQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAG 361
M+ +KPN VTF+SV AC+H GLV+EG + M+++ ++ +++HYG ++ + +AG
Sbjct: 379 MEMESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSMIDDYSIVSNVEHYGGMVHLFSKAG 438
Query: 362 RLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMY 421
+ +A + + E + V+W LL C H N+ + E K++ +E G Y L+
Sbjct: 439 LIYEALELIGNMEFE-PNAVIWGALLDGCRIHKNLVIAEIAFNKLMVLEPMNSGYYFLLV 497
Query: 422 NILAGVGRFGDAERLRRVMDERNAFKV-PGCSLV 454
++ A R+ D +R M E K+ PG S +
Sbjct: 498 SMYAEQNRWRDVAEIRGRMRELGIEKICPGTSSI 531
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 66/301 (21%), Positives = 129/301 (42%), Gaps = 33/301 (10%)
Query: 144 NVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYT 203
N IT + L+ A S +M NV + + G+ + +L L+ +M+ +
Sbjct: 64 NQFITACTSFKCLDLAVSTMTQMQEPNVFVYNALFKGFVTCSHPIRSLELYVRMLR-DSV 122
Query: 204 EPSEITILAVLPAIWQNGDVKSCQLIHGYGE-------KRGFTAFDIRVLNCLIDTYAKC 256
PS T ++ VK+ +GE K GF F +++ LID Y+
Sbjct: 123 SPSSYTYSSL---------VKASSFASRFGESLQAHIWKFGF-GFHVKIQTTLIDFYSAT 172
Query: 257 GCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLS 316
G I A K+F+++ ER + ++WT+++S + + ++ + + N T
Sbjct: 173 GGIREARKVFDEMP-ERDD-IAWTTMVSAYR-RVLDMDSANSLANQMS---EKNEATSNC 226
Query: 317 VLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSE 376
++N G +E+ + F++M + DI + +I + R +A + E
Sbjct: 227 LINGYMGLGNLEQAESLFNQM-----PVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEE 281
Query: 377 --ITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAE 434
I D V T++ AC+ G +E+G+ V + ++ G+ D + ++ + G E
Sbjct: 282 GIIPDEVTMSTVISACAHLGVLEIGKEV--HMYTLQNGFVLDVYIGSALVDMYSKCGSLE 339
Query: 435 R 435
R
Sbjct: 340 R 340
>gi|297834808|ref|XP_002885286.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331126|gb|EFH61545.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 471
Score = 237 bits (604), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 130/318 (40%), Positives = 192/318 (60%), Gaps = 17/318 (5%)
Query: 151 VKWGELEFARSLFEEMPCRNVVSWTGIIDGY-TRMNRSN----EALALFRKMVAC-EYTE 204
K G+L +AR +F+EMP R V+W +I GY + ++ N +A+ LFR+ C
Sbjct: 157 AKNGDLRYARKVFDEMPERTSVTWNAMIGGYCSHKDKGNHNARKAMILFRRFSCCGSGVR 216
Query: 205 PSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTA-FDIRVLNCLIDTYAKCGCIFSAS 263
P++ T++ VLPAI Q G ++ L+HGY EK GFT D+ + L+D Y+KCGC+ SA
Sbjct: 217 PTDTTMVCVLPAISQTGLIEIGSLVHGYIEKLGFTPEIDVFIGTGLVDMYSKCGCLNSAF 276
Query: 264 KLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSH 323
+FE + V KN+ +WTS+ +G A+HG G E RM + G+KPN VTF S+L+A H
Sbjct: 277 SVFELMKV--KNVFTWTSMATGLALHGRGNETPNLLDRMAESGIKPNEVTFTSLLSAYRH 334
Query: 324 GGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVW 383
GLV+EG+ F M V P I+HYGC++D+LG+AGR+++A + L +P + D ++
Sbjct: 335 IGLVQEGIELFKSMRTRFGVTPVIQHYGCIVDLLGKAGRIQEAYEFVLAMPIK-PDTILL 393
Query: 384 RTLLGACSFHGNVEMGERVTRKILEMER-------GYGGDYVLMYNILAGVGRFGDAERL 436
R+L ACS +G MGE + + +LE+ER DYV + N+LA G++ + E+L
Sbjct: 394 RSLCNACSIYGETAMGEEIGKALLEIEREEEKLSGSECEDYVALSNMLAHKGKWIEVEKL 453
Query: 437 RRVMDERNAFKVPGCSLV 454
R M ER PG S V
Sbjct: 454 RNEMKERRIKTRPGFSFV 471
>gi|334182333|ref|NP_172105.4| uncharacterized basic helix-loop-helix protein [Arabidopsis thaliana]
gi|8810477|gb|AAF80138.1|AC024174_20 Contains similarity to an unknown protein T5J8.5 gi|4263522 from
Arabidopsis thaliana BAC T5J8 gb|AC004044 and contains
multiple PPR PF|01535 repeats. ESTs gb|AV565358,
gb|AV558710, gb|AV524184 come from this gene [Arabidopsis
thaliana]
gi|332189826|gb|AEE27947.1| uncharacterized basic helix-loop-helix protein [Arabidopsis thaliana]
Length = 1322
Score = 237 bits (604), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 143/454 (31%), Positives = 237/454 (52%), Gaps = 47/454 (10%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNL 92
++N L + P ++ LY ++ + S SP S+TYS L++ + S
Sbjct: 838 VYNALFKGFVTCSHPIRSLELYVRMLR---DSVSP-----SSYTYSSLVKASSFASR--F 887
Query: 93 GTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTW--------- 143
G L A I K GF HV + T L++ Y + G ++++ K+FDEMPER+ + W
Sbjct: 888 GESLQAHIWKFGFGFHVKIQTTLIDFYSATGRIREARKVFDEMPERDDIAWTTMVSAYRR 947
Query: 144 ----------------------NVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGY 181
N +I G + G LE A SLF +MP ++++SWT +I GY
Sbjct: 948 VLDMDSANSLANQMSEKNEATSNCLINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGY 1007
Query: 182 TRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAF 241
++ R EA+A+F KM+ E P E+T+ V+ A G ++ + +H Y + GF
Sbjct: 1008 SQNKRYREAIAVFYKMME-EGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFV-L 1065
Query: 242 DIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGR 301
D+ + + L+D Y+KCG + A +F ++ +KNL W SII G A HG +EA++ F +
Sbjct: 1066 DVYIGSALVDMYSKCGSLERALLVF--FNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAK 1123
Query: 302 MQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAG 361
M+ +KPN VTF+SV AC+H GLV+EG + M+++ ++ +++HYG ++ + +AG
Sbjct: 1124 MEMESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSMIDDYSIVSNVEHYGGMVHLFSKAG 1183
Query: 362 RLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMY 421
+ +A + + E + V+W LL C H N+ + E K++ +E G Y L+
Sbjct: 1184 LIYEALELIGNMEFE-PNAVIWGALLDGCRIHKNLVIAEIAFNKLMVLEPMNSGYYFLLV 1242
Query: 422 NILAGVGRFGDAERLRRVMDERNAFKV-PGCSLV 454
++ A R+ D +R M E K+ PG S +
Sbjct: 1243 SMYAEQNRWRDVAEIRGRMRELGIEKICPGTSSI 1276
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/301 (21%), Positives = 129/301 (42%), Gaps = 33/301 (10%)
Query: 144 NVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYT 203
N IT + L+ A S +M NV + + G+ + +L L+ +M+ +
Sbjct: 809 NQFITACTSFKRLDLAVSTMTQMQEPNVFVYNALFKGFVTCSHPIRSLELYVRMLR-DSV 867
Query: 204 EPSEITILAVLPAIWQNGDVKSCQLIHGYGE-------KRGFTAFDIRVLNCLIDTYAKC 256
PS T ++ VK+ +GE K GF F +++ LID Y+
Sbjct: 868 SPSSYTYSSL---------VKASSFASRFGESLQAHIWKFGF-GFHVKIQTTLIDFYSAT 917
Query: 257 GCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLS 316
G I A K+F+++ ER + ++WT+++S + + ++ + + N T
Sbjct: 918 GRIREARKVFDEMP-ERDD-IAWTTMVSAY-RRVLDMDSANSLANQMS---EKNEATSNC 971
Query: 317 VLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSE 376
++N G +E+ + F++M + DI + +I + R +A + E
Sbjct: 972 LINGYMGLGNLEQAESLFNQM-----PVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEE 1026
Query: 377 --ITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAE 434
I D V T++ AC+ G +E+G+ V + ++ G+ D + ++ + G E
Sbjct: 1027 GIIPDEVTMSTVISACAHLGVLEIGKEV--HMYTLQNGFVLDVYIGSALVDMYSKCGSLE 1084
Query: 435 R 435
R
Sbjct: 1085 R 1085
>gi|110741594|dbj|BAE98745.1| hypothetical protein [Arabidopsis thaliana]
Length = 527
Score = 236 bits (603), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 136/421 (32%), Positives = 224/421 (53%), Gaps = 43/421 (10%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
FNT++ Y S ++A Y ++ Q + P D+FTY L++ C L G
Sbjct: 100 FNTMIRGYVNVMSFEEALCFYNEMMQ---RGNEP-----DNFTYPCLLKACTRLKSIREG 151
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
Q+H + K+G ++ V+V +L+NMY +
Sbjct: 152 KQIHGQVFKLGLEADVFVQNSLINMYG-------------------------------RC 180
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
GE+E + ++FE++ + SW+ ++ M +E L LFR M + + E +++
Sbjct: 181 GEMELSSAVFEKLESKTAASWSSMVSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSA 240
Query: 214 LPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVER 273
L A G + IHG+ R + +I V L+D Y KCGC+ A +F+ + E+
Sbjct: 241 LLACANTGALNLGMSIHGF-LLRNISELNIIVQTSLVDMYVKCGCLDKALHIFQKM--EK 297
Query: 274 KNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNF 333
+N ++++++ISG A+HG G+ A+ F +M K GL+P+ V ++SVLNACSH GLV+EG
Sbjct: 298 RNNLTYSAMISGLALHGEGESALRMFSKMIKEGLEPDHVVYVSVLNACSHSGLVKEGRRV 357
Query: 334 FDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFH 393
F +M++E +V P +HYGCL+D+LGRAG LE+A +T IP E D V+WRT L C
Sbjct: 358 FAEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEALETIQSIPIEKND-VIWRTFLSQCRVR 416
Query: 394 GNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSL 453
N+E+G+ +++L++ GDY+L+ N+ + + D R R + + + PG S+
Sbjct: 417 QNIELGQIAAQELLKLSSHNPGDYLLISNLYSQGQMWDDVARTRTEIAIKGLKQTPGFSI 476
Query: 454 V 454
V
Sbjct: 477 V 477
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 134/293 (45%), Gaps = 20/293 (6%)
Query: 156 LEFARSLFE--EMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
+ +A S+F + PC + +I GY + EAL + +M+ EP T +
Sbjct: 82 MNYAASIFRGIDDPC--TFDFNTMIRGYVNVMSFEEALCFYNEMMQ-RGNEPDNFTYPCL 138
Query: 214 LPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVER 273
L A + ++ + IHG K G A D+ V N LI+ Y +CG + +S +FE + E
Sbjct: 139 LKACTRLKSIREGKQIHGQVFKLGLEA-DVFVQNSLINMYGRCGEMELSSAVFEKL--ES 195
Query: 274 KNLVSWTSIISGFAMHGMGKEAVENF-GRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLN 332
K SW+S++S A GM E + F G + LK +S L AC++ G + G++
Sbjct: 196 KTAASWSSMVSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMS 255
Query: 333 ---FFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGA 389
F + + E ++ L+DM + G L++A + E + + + ++
Sbjct: 256 IHGFLLRNISELNIIVQTS----LVDMYVKCGCLDKA--LHIFQKMEKRNNLTYSAMISG 309
Query: 390 CSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDE 442
+ HG E R+ K++ + G D+V+ ++L G + RRV E
Sbjct: 310 LALHGEGESALRMFSKMI--KEGLEPDHVVYVSVLNACSHSGLVKEGRRVFAE 360
>gi|414589997|tpg|DAA40568.1| TPA: hypothetical protein ZEAMMB73_314346 [Zea mays]
Length = 627
Score = 236 bits (603), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 141/428 (32%), Positives = 230/428 (53%), Gaps = 22/428 (5%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+NTLL YS + + + LL+ +++ D T L C L+HP+ G
Sbjct: 174 WNTLLMGYSRSGNANQCLLLFNKMRAEGMAC--------DGATLCILADACTELAHPSAG 225
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
+ +H V + G+ + V+ +L+++Y L D+ ++F+ M R +V+WN +I +K
Sbjct: 226 SAIHKVAVQSGWSAMAEVSNSLISLYSKFSLLDDAVRIFESMEVRTIVSWNSLIDSYMKL 285
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
G +E A SLF +P NV+SWT +I G R ++EALALF M+A E+ P + T +V
Sbjct: 286 GCVEKATSLFRRVPETNVISWTAMIGGLARNGCADEALALFIVMLAHEHIHPDDFTFGSV 345
Query: 214 LPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVER 273
L A + S +++H + GF A+ + V N L+D YAKCG + + +F ++
Sbjct: 346 LHACATAASLASGRMVHCRAFRSGFAAY-LYVANSLMDMYAKCGDVEGGTNVFG--AIVN 402
Query: 274 KNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNF 333
K+LVSW +++ GFA++G EA+ + M+ + P+ VTF +L AC+H GL+E G +F
Sbjct: 403 KDLVSWNTMLFGFAINGWANEALVVYDSMKSHEVCPDEVTFAGLLTACNHSGLLEHGESF 462
Query: 334 FDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEIT---DVVVWRTLLGAC 390
F+ MV + P +H C++DM R+G + +A + L + SE + + LL AC
Sbjct: 463 FESMVSVHGIQPKPEHLSCILDMYARSGNITKAMEM-LDLYSETIRAHNSDIREALLSAC 521
Query: 391 SFHGNVEMGERVTRKILE--MERGYGGD--YVLMYNILAGVGRFGDAERLRRVMDERNAF 446
S + RV RK +E + GD YV++ N+ G++ AE++R M E
Sbjct: 522 SLE---HLNFRVARKAMEDMVATKSAGDVGYVMLSNLFCAAGQWNQAEQVRIAMAEHGIK 578
Query: 447 KVPGCSLV 454
K PGCS +
Sbjct: 579 KTPGCSWI 586
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 115/395 (29%), Positives = 180/395 (45%), Gaps = 55/395 (13%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+N +L Y A P+ A L+ S +P P D+F+ + + A L P G
Sbjct: 46 WNAMLTAYVRAGQPRDALTLF---------SRAPAP---DAFSLTAALSAAAALRSPVAG 93
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
QLHA + + G ++ + V LV+MY D+++ F EM ERN ++W ++ V
Sbjct: 94 AQLHARLIRAGLRALLPVGNTLVDMYAKCARADDAARAFGEMRERNALSWCSLLHAYVVS 153
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKM----VAC--------- 200
L A+ LF++MP RN V+W ++ GY+R +N+ L LF KM +AC
Sbjct: 154 DHLMLAQELFDQMPNRNNVAWNTLLMGYSRSGNANQCLLLFNKMRAEGMACDGATLCILA 213
Query: 201 ----EYTEPSEITIL--AVLPAIWQNGDVKSCQLIHGYGE-------KRGFTAFDIRVL- 246
E PS + + + + W S LI Y + R F + ++R +
Sbjct: 214 DACTELAHPSAGSAIHKVAVQSGWSAMAEVSNSLISLYSKFSLLDDAVRIFESMEVRTIV 273
Query: 247 --NCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRM-Q 303
N LID+Y K GC+ A+ LF V N++SWT++I G A +G EA+ F M
Sbjct: 274 SWNSLIDSYMKLGCVEKATSLFR--RVPETNVISWTAMIGGLARNGCADEALALFIVMLA 331
Query: 304 KVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHY----GCLIDMLGR 359
+ P+ TF SVL+AC+ + G +MV Y L+DM +
Sbjct: 332 HEHIHPDDFTFGSVLHACATAASLASG-----RMVHCRAFRSGFAAYLYVANSLMDMYAK 386
Query: 360 AGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHG 394
G +E I ++ D+V W T+L + +G
Sbjct: 387 CGDVEGGTNVFGAIVNK--DLVSWNTMLFGFAING 419
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 92/203 (45%), Gaps = 16/203 (7%)
Query: 140 LVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVA 199
LV I L + G+ AR++F+ MP R+ V+W ++ Y R + +AL LF + A
Sbjct: 12 LVAATSRIASLGRAGDAASARAMFDAMPRRDAVAWNAMLTAYVRAGQPRDALTLFSRAPA 71
Query: 200 CEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCI 259
P ++ A L A + +H + G A + V N L+D YAKC
Sbjct: 72 -----PDAFSLTAALSAAAALRSPVAGAQLHARLIRAGLRAL-LPVGNTLVDMYAKCARA 125
Query: 260 FSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNR--VTFLSV 317
A++ F ++ +N +SW S++ + + A E F +M PNR V + ++
Sbjct: 126 DDAARAFGEM--RERNALSWCSLLHAYVVSDHLMLAQELFDQM------PNRNNVAWNTL 177
Query: 318 LNACSHGGLVEEGLNFFDKMVEE 340
L S G + L F+KM E
Sbjct: 178 LMGYSRSGNANQCLLLFNKMRAE 200
>gi|147819295|emb|CAN68962.1| hypothetical protein VITISV_019277 [Vitis vinifera]
Length = 676
Score = 236 bits (603), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 143/424 (33%), Positives = 228/424 (53%), Gaps = 48/424 (11%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+ T+++ Y L + A LL + +Q + P F T + ++ CA+L G
Sbjct: 293 WTTMMNGYILNGDARSALLLCQMMQ------FESVKPNF--VTLASVLSACASLYSLKHG 344
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
LH + +S V V TAL++MY + S ++F + ++ WN +I+G +
Sbjct: 345 RCLHGWAIRQKLESEVIVETALIDMYAKCNNVNLSFRVFSKXSKQRTAPWNAIISGCIHN 404
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
G S +A+ LF++M+ E +P++ T+ ++
Sbjct: 405 G-------------------------------LSRKAIELFKQMLM-EAVDPNDATLNSL 432
Query: 214 LPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVER 273
LPA D++ + +HGY + GF + I V LID Y+KCG + SA +F I +
Sbjct: 433 LPAYAFLTDLQQARNMHGYLIRSGFLS-RIEVATILIDIYSKCGSLESAHNIFNGIPKKD 491
Query: 274 KNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNF 333
K++++W++II+G+ MHG G+ A+ F +M + G+KPN +TF S+L+ACSH GLV+EGL
Sbjct: 492 KDIITWSAIIAGYGMHGHGETAISLFDQMVQSGVKPNEITFTSILHACSHAGLVDEGLGL 551
Query: 334 FDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAE---KTALGIPSEITDVVVWRTLLGAC 390
F M+E+ ++ HY C+ID+LGRAGRLE+A +T P+ VW LLG+C
Sbjct: 552 FKFMLEDNQMSLRTDHYTCVIDLLGRAGRLEEAYELIRTMAFRPNH----AVWGALLGSC 607
Query: 391 SFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPG 450
H NVE+GE + + E+E G G+YVL+ NI + VGR+ DAE +R +M+ K P
Sbjct: 608 VIHENVELGEVAAKWLFELEPGNTGNYVLLANIYSAVGRWRDAEHVRLMMNNIGLRKTPA 667
Query: 451 CSLV 454
SL+
Sbjct: 668 HSLI 671
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 120/485 (24%), Positives = 205/485 (42%), Gaps = 105/485 (21%)
Query: 10 PNNITTQIHSHLLT----TNSLLHHSQLFNTLLHFYSLAESPQKAFLLYKQLQ------- 58
PN T QIH+H +T ++ HH L ++L Y++ A L+ +L+
Sbjct: 35 PN--TKQIHAHTITLGLLSSPYSHH--LLSSLAAAYAMCGCAPHARKLFDELRNPSLFSW 90
Query: 59 ----QIYTHSHSPLPPLF-------------DSFTYSFLIRTCATLSHPNLGTQLHAVIS 101
++YT+S L D++TY F+I+ C P +G +HA
Sbjct: 91 NAMIRMYTNSGLSYDALGLFVQMLASGRRWPDNYTYPFVIKACGDYLLPEMGALIHARTV 150
Query: 102 KVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARS 161
GF S +V +L+ MY++ G ++ + ++FD M ER LV+WN MI G K G ++ A
Sbjct: 151 MSGFDSDAFVQNSLMAMYMNCGEMEVARRVFDLMRERTLVSWNTMINGYFKNGCVKEALM 210
Query: 162 LFEEM-------PCRNVVS--------------------------------WTGIIDGYT 182
+F+ M C VVS W ++D Y
Sbjct: 211 VFDWMIGKGIEPDCATVVSVLPVCSYLKELEVGRRVHALVEVKNLGEDISVWNSLLDMYA 270
Query: 183 RMNRSNEALALFR------------------------------KMVACEYTEPSEITILA 212
+ +EA +F +M+ E +P+ +T+ +
Sbjct: 271 KCGNMDEAQMIFYEMDKRDVVSWTTMMNGYILNGDARSALLLCQMMQFESVKPNFVTLAS 330
Query: 213 VLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVE 272
VL A +K + +HG+ ++ + ++ V LID YAKC + + ++F S +
Sbjct: 331 VLSACASLYSLKHGRCLHGWAIRQKLES-EVIVETALIDMYAKCNNVNLSFRVFSKXSKQ 389
Query: 273 RKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLN 332
R W +IISG +G+ ++A+E F +M + PN T S+L A + +++ N
Sbjct: 390 RT--APWNAIISGCIHNGLSRKAIELFKQMLMEAVDPNDATLNSLLPAYAFLTDLQQARN 447
Query: 333 FFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSF 392
++ L I+ LID+ + G LE A GIP + D++ W ++
Sbjct: 448 MHGYLIRS-GFLSRIEVATILIDIYSKCGSLESAHNIFNGIPKKDKDIITWSAIIAGYGM 506
Query: 393 HGNVE 397
HG+ E
Sbjct: 507 HGHGE 511
>gi|225452956|ref|XP_002279032.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39350
[Vitis vinifera]
gi|296082987|emb|CBI22288.3| unnamed protein product [Vitis vinifera]
Length = 676
Score = 236 bits (603), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 143/424 (33%), Positives = 228/424 (53%), Gaps = 48/424 (11%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+ T+++ Y L + A LL + +Q + P F T + ++ CA+L G
Sbjct: 293 WTTMMNGYILNGDARSALLLCQMMQ------FESVKPNF--VTLASVLSACASLYSLKHG 344
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
LH + +S V V TAL++MY + S ++F + ++ WN +I+G +
Sbjct: 345 RCLHGWAIRQKLESEVIVETALIDMYAKCNNVNLSFRVFSKTSKQRTAPWNAIISGCIHN 404
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
G S +A+ LF++M+ E +P++ T+ ++
Sbjct: 405 G-------------------------------LSRKAIELFKQMLM-EAVDPNDATLNSL 432
Query: 214 LPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVER 273
LPA D++ + +HGY + GF + I V LID Y+KCG + SA +F I +
Sbjct: 433 LPAYAFLTDLQQARNMHGYLIRSGFLS-RIEVATILIDIYSKCGSLESAHNIFNGIPKKD 491
Query: 274 KNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNF 333
K++++W++II+G+ MHG G+ A+ F +M + G+KPN +TF S+L+ACSH GLV+EGL
Sbjct: 492 KDIITWSAIIAGYGMHGHGETAISLFDQMVQSGVKPNEITFTSILHACSHAGLVDEGLGL 551
Query: 334 FDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAE---KTALGIPSEITDVVVWRTLLGAC 390
F M+E+ ++ HY C+ID+LGRAGRLE+A +T P+ VW LLG+C
Sbjct: 552 FKFMLEDNQMSLRTDHYTCVIDLLGRAGRLEEAYELIRTMAFRPNH----AVWGALLGSC 607
Query: 391 SFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPG 450
H NVE+GE + + E+E G G+YVL+ NI + VGR+ DAE +R +M+ K P
Sbjct: 608 VIHENVELGEVAAKWLFELEPGNTGNYVLLANIYSAVGRWRDAEHVRLMMNNIGLRKTPA 667
Query: 451 CSLV 454
SL+
Sbjct: 668 HSLI 671
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 120/485 (24%), Positives = 205/485 (42%), Gaps = 105/485 (21%)
Query: 10 PNNITTQIHSHLLT----TNSLLHHSQLFNTLLHFYSLAESPQKAFLLYKQLQ------- 58
PN T QIH+H +T ++ HH L ++L Y++ A L+ +L+
Sbjct: 35 PN--TKQIHAHTITLGLLSSPYSHH--LLSSLAAAYAMFGCAPHARKLFDELRNPSLFSW 90
Query: 59 ----QIYTHSHSPLPPLF-------------DSFTYSFLIRTCATLSHPNLGTQLHAVIS 101
++YT+S L D++TY F+I+ C P +G +HA
Sbjct: 91 NAMIRMYTNSGLSYDALGLFVQMLASGRRWPDNYTYPFVIKACGDYLLPEMGALIHARTV 150
Query: 102 KVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARS 161
GF S +V +L+ MY++ G ++ + ++FD M ER LV+WN MI G K G ++ A
Sbjct: 151 MSGFDSDAFVQNSLMAMYMNCGEMEVARRVFDLMRERTLVSWNTMINGYFKNGCVKEALM 210
Query: 162 LFEEM-------PCRNVVS--------------------------------WTGIIDGYT 182
+F+ M C VVS W ++D Y
Sbjct: 211 VFDWMIGKGIEPDCATVVSVLPVCSYLKELEVGRRVHALVEVKNLGEDISVWNSLLDMYA 270
Query: 183 RMNRSNEALALFR------------------------------KMVACEYTEPSEITILA 212
+ +EA +F +M+ E +P+ +T+ +
Sbjct: 271 KCGNMDEAQMIFYEMDKRDVVSWTTMMNGYILNGDARSALLLCQMMQFESVKPNFVTLAS 330
Query: 213 VLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVE 272
VL A +K + +HG+ ++ + ++ V LID YAKC + + ++F S +
Sbjct: 331 VLSACASLYSLKHGRCLHGWAIRQKLES-EVIVETALIDMYAKCNNVNLSFRVFSKTSKQ 389
Query: 273 RKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLN 332
R W +IISG +G+ ++A+E F +M + PN T S+L A + +++ N
Sbjct: 390 RT--APWNAIISGCIHNGLSRKAIELFKQMLMEAVDPNDATLNSLLPAYAFLTDLQQARN 447
Query: 333 FFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSF 392
++ L I+ LID+ + G LE A GIP + D++ W ++
Sbjct: 448 MHGYLIRS-GFLSRIEVATILIDIYSKCGSLESAHNIFNGIPKKDKDIITWSAIIAGYGM 506
Query: 393 HGNVE 397
HG+ E
Sbjct: 507 HGHGE 511
>gi|359482518|ref|XP_002279880.2| PREDICTED: uncharacterized protein LOC100266920 [Vitis vinifera]
Length = 1753
Score = 236 bits (603), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 129/370 (34%), Positives = 209/370 (56%), Gaps = 13/370 (3%)
Query: 93 GTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVK 152
G +H + K GF+++++V +L+ +Y G + + LF E+ +N+V+WN +I+
Sbjct: 1128 GKVIHGYVVKGGFENYLFVKNSLICLYGKHGNVNAARILFLEIKTKNIVSWNALISSYAD 1187
Query: 153 WGELEFARSLF------EEMPC--RNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTE 204
G + A ++F +E P NVVSW+ +I G+ + EAL LFR+M + +
Sbjct: 1188 LGWCDEAFAIFLQLEKTDEYPMVRPNVVSWSAVIGGFASKGQGEEALELFRRMQLAK-VK 1246
Query: 205 PSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASK 264
+ +TI +VL + + + IHG+ R +I V N LI+ Y K G +
Sbjct: 1247 ANSVTIASVLSVCAELAALHLGREIHGH-VVRSLMDGNILVGNGLINMYTKSGSFKEGNL 1305
Query: 265 LFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHG 324
+FE I E K+L+SW ++++G+ +HG+G+ A+ F +M K G +P+ VTF++VL+ACSH
Sbjct: 1306 VFEKI--ENKDLISWNTMVAGYGIHGLGENAIRTFDQMIKDGFEPDGVTFVAVLSACSHA 1363
Query: 325 GLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWR 384
GLV EG FDKM++E V P ++HY C++D+LGRAG L++A K +P E + VW
Sbjct: 1364 GLVAEGRELFDKMIKEFRVEPQMEHYACMVDLLGRAGLLQEASKVVKSMPVE-PNACVWG 1422
Query: 385 TLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERN 444
LL +C H N E+ E +I + G Y+L+ NI A GR+ D+ ++R +
Sbjct: 1423 ALLNSCRMHKNTEVAEETASQIFNLNSEIAGSYMLLSNIYAASGRWEDSAKVRISAKTKG 1482
Query: 445 AFKVPGCSLV 454
K PG S +
Sbjct: 1483 LKKTPGQSWI 1492
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 120/461 (26%), Positives = 202/461 (43%), Gaps = 63/461 (13%)
Query: 24 TNSLLHHSQLFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRT 83
+N LL +S L + H Y ++A +Y +++++ + D FT+ +IR
Sbjct: 936 SNLLLWNSILRANVAHGYC-----EEALEIYCRMRKLGVSA--------DGFTFPLVIRA 982
Query: 84 CATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTW 143
CA + L +H + ++GFQ +++V L+ MY +G + D+ K+F+ M R+ V+W
Sbjct: 983 CALMGSRKLCRSVHGHVVEMGFQWNLHVGNELMGMYGKIGRMDDARKVFERMAVRSCVSW 1042
Query: 144 NVMITGLVKWGELEFARSLFEEMPCR----NVVSWTGIIDGYTRMNRSNEALALFRKMVA 199
N M++G + A +F M N+V+WT ++ + R + E + LF +M
Sbjct: 1043 NTMVSGYALNYDCHGASEMFRMMGSAGLEPNLVTWTSLLSSHARCGQHVETMELFGRMRM 1102
Query: 200 CEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCI 259
+E + VL ++IHGY K GF + + V N LI Y K G +
Sbjct: 1103 RGIGATAE-ALAVVLSVSVDLAAFDEGKVIHGYVVKGGFENY-LFVKNSLICLYGKHGNV 1160
Query: 260 FSASKLFEDISVE-------------------------------------RKNLVSWTSI 282
+A LF +I + R N+VSW+++
Sbjct: 1161 NAARILFLEIKTKNIVSWNALISSYADLGWCDEAFAIFLQLEKTDEYPMVRPNVVSWSAV 1220
Query: 283 ISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECE 342
I GFA G G+EA+E F RMQ +K N VT SVL+ C+ + G +V
Sbjct: 1221 IGGFASKGQGEEALELFRRMQLAKVKANSVTIASVLSVCAELAALHLGREIHGHVVRSL- 1279
Query: 343 VLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERV 402
+ +I LI+M ++G ++ I E D++ W T++ HG +GE
Sbjct: 1280 MDGNILVGNGLINMYTKSGSFKEGNLVFEKI--ENKDLISWNTMVAGYGIHG---LGENA 1334
Query: 403 TRKILEM-ERGYGGDYVLMYNILAGVGRFGDAERLRRVMDE 442
R +M + G+ D V +L+ G R + D+
Sbjct: 1335 IRTFDQMIKDGFEPDGVTFVAVLSACSHAGLVAEGRELFDK 1375
>gi|297741829|emb|CBI33142.3| unnamed protein product [Vitis vinifera]
Length = 1198
Score = 236 bits (603), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 125/347 (36%), Positives = 201/347 (57%), Gaps = 5/347 (1%)
Query: 106 QSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEE 165
Q +V T +++ YV G ++ LF++MP++N+V MITG K G+ + A+ LF++
Sbjct: 127 QKNVVSWTVMISGYVENGKFDEAENLFEQMPDKNIVAMTAMITGYCKEGKTDKAKILFDQ 186
Query: 166 MPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKS 225
+PCR++ SW +I GY + EAL L +M+ +P T+++VL A ++
Sbjct: 187 IPCRDLASWNAMITGYAQNGSGEEALKLHSQMLKM-GMQPDHSTLISVLTACSSLASLQE 245
Query: 226 CQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISG 285
+ H K G+ + I + N LI Y KCG I + F I + ++VSW ++I+
Sbjct: 246 GRKTHVLVLKSGYESR-ISICNALITMYCKCGSILDSELAFRQI--DHPDVVSWNAMIAA 302
Query: 286 FAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLP 345
FA HG A+ +FG M+ ++P+ +TFLS+L+AC H G V E LN+F+ M+E +++P
Sbjct: 303 FARHGFYDRALASFGEMRSNRVEPDGITFLSLLSACGHAGKVHESLNWFNSMIESYKIVP 362
Query: 346 DIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRK 405
+H+ CL+D+L R G++E+A K +P E D +W LL AC H NV++GE +K
Sbjct: 363 RPEHFACLVDILSRGGQVEKAYKIIQEMPFE-ADCGIWGALLAACHVHLNVKLGELAAKK 421
Query: 406 ILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCS 452
I+E+E G YV++ NI A G +G+ R+R +M E+ K P S
Sbjct: 422 IVELEPQNSGAYVVLSNIYAAAGMWGEVTRVRGLMREQGVKKQPAYS 468
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 84/264 (31%), Positives = 136/264 (51%), Gaps = 17/264 (6%)
Query: 132 FDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEAL 191
F MP+RN +WN MI+GLV++ +E A LFEEMP RNV+S+T ++DGY ++ +A
Sbjct: 60 FQAMPQRNTASWNAMISGLVRYDRVEEASRLFEEMPRRNVISYTAMVDGYAKIGEIEQAR 119
Query: 192 ALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQ-LIHGYGEKRGFTAFDIRVLNCLI 250
ALF M + + ++ ++ +NG + L +K +I + +I
Sbjct: 120 ALFNCM-----PQKNVVSWTVMISGYVENGKFDEAENLFEQMPDK------NIVAMTAMI 168
Query: 251 DTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPN 310
Y K G A LF+ I ++L SW ++I+G+A +G G+EA++ +M K+G++P+
Sbjct: 169 TGYCKEGKTDKAKILFDQIPC--RDLASWNAMITGYAQNGSGEEALKLHSQMLKMGMQPD 226
Query: 311 RVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTA 370
T +SVL ACS ++EG +V + I LI M + G + +E
Sbjct: 227 HSTLISVLTACSSLASLQEGRKTH-VLVLKSGYESRISICNALITMYCKCGSILDSELAF 285
Query: 371 LGIPSEITDVVVWRTLLGACSFHG 394
I DVV W ++ A + HG
Sbjct: 286 RQIDH--PDVVSWNAMIAAFARHG 307
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/280 (21%), Positives = 126/280 (45%), Gaps = 17/280 (6%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+N ++ Y+ S ++A L+ Q+ ++ + P D T ++ C++L+ G
Sbjct: 195 WNAMITGYAQNGSGEEALKLHSQMLKM------GMQP--DHSTLISVLTACSSLASLQEG 246
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
+ H ++ K G++S + + AL+ MY G + DS F ++ ++V+WN MI +
Sbjct: 247 RKTHVLVLKSGYESRISICNALITMYCKCGSILDSELAFRQIDHPDVVSWNAMIAAFARH 306
Query: 154 GELEFARSLFEEMPCRNV----VSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEIT 209
G + A + F EM V +++ ++ + +E+L F M+ P
Sbjct: 307 GFYDRALASFGEMRSNRVEPDGITFLSLLSACGHAGKVHESLNWFNSMIESYKIVPRPEH 366
Query: 210 ILAVLPAIWQNGDV-KSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFED 268
++ + + G V K+ ++I + + + C + K G + +A K+ E
Sbjct: 367 FACLVDILSRGGQVEKAYKIIQEMPFEADCGIWGALLAACHVHLNVKLGEL-AAKKIVE- 424
Query: 269 ISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLK 308
+E +N ++ + + +A GM E G M++ G+K
Sbjct: 425 --LEPQNSGAYVVLSNIYAAAGMWGEVTRVRGLMREQGVK 462
>gi|297743088|emb|CBI35955.3| unnamed protein product [Vitis vinifera]
Length = 708
Score = 236 bits (603), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 129/370 (34%), Positives = 209/370 (56%), Gaps = 13/370 (3%)
Query: 93 GTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVK 152
G +H + K GF+++++V +L+ +Y G + + LF E+ +N+V+WN +I+
Sbjct: 290 GKVIHGYVVKGGFENYLFVKNSLICLYGKHGNVNAARILFLEIKTKNIVSWNALISSYAD 349
Query: 153 WGELEFARSLF------EEMPC--RNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTE 204
G + A ++F +E P NVVSW+ +I G+ + EAL LFR+M + +
Sbjct: 350 LGWCDEAFAIFLQLEKTDEYPMVRPNVVSWSAVIGGFASKGQGEEALELFRRMQLAK-VK 408
Query: 205 PSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASK 264
+ +TI +VL + + + IHG+ R +I V N LI+ Y K G +
Sbjct: 409 ANSVTIASVLSVCAELAALHLGREIHGH-VVRSLMDGNILVGNGLINMYTKSGSFKEGNL 467
Query: 265 LFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHG 324
+FE I E K+L+SW ++++G+ +HG+G+ A+ F +M K G +P+ VTF++VL+ACSH
Sbjct: 468 VFEKI--ENKDLISWNTMVAGYGIHGLGENAIRTFDQMIKDGFEPDGVTFVAVLSACSHA 525
Query: 325 GLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWR 384
GLV EG FDKM++E V P ++HY C++D+LGRAG L++A K +P E + VW
Sbjct: 526 GLVAEGRELFDKMIKEFRVEPQMEHYACMVDLLGRAGLLQEASKVVKSMPVE-PNACVWG 584
Query: 385 TLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERN 444
LL +C H N E+ E +I + G Y+L+ NI A GR+ D+ ++R +
Sbjct: 585 ALLNSCRMHKNTEVAEETASQIFNLNSEIAGSYMLLSNIYAASGRWEDSAKVRISAKTKG 644
Query: 445 AFKVPGCSLV 454
K PG S +
Sbjct: 645 LKKTPGQSWI 654
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 120/461 (26%), Positives = 202/461 (43%), Gaps = 63/461 (13%)
Query: 24 TNSLLHHSQLFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRT 83
+N LL +S L + H Y ++A +Y +++++ + D FT+ +IR
Sbjct: 98 SNLLLWNSILRANVAHGYC-----EEALEIYCRMRKLGVSA--------DGFTFPLVIRA 144
Query: 84 CATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTW 143
CA + L +H + ++GFQ +++V L+ MY +G + D+ K+F+ M R+ V+W
Sbjct: 145 CALMGSRKLCRSVHGHVVEMGFQWNLHVGNELMGMYGKIGRMDDARKVFERMAVRSCVSW 204
Query: 144 NVMITGLVKWGELEFARSLFEEMPCR----NVVSWTGIIDGYTRMNRSNEALALFRKMVA 199
N M++G + A +F M N+V+WT ++ + R + E + LF +M
Sbjct: 205 NTMVSGYALNYDCHGASEMFRMMGSAGLEPNLVTWTSLLSSHARCGQHVETMELFGRMRM 264
Query: 200 CEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCI 259
+E + VL ++IHGY K GF + + V N LI Y K G +
Sbjct: 265 RGIGATAE-ALAVVLSVSVDLAAFDEGKVIHGYVVKGGFENY-LFVKNSLICLYGKHGNV 322
Query: 260 FSASKLFEDISVE-------------------------------------RKNLVSWTSI 282
+A LF +I + R N+VSW+++
Sbjct: 323 NAARILFLEIKTKNIVSWNALISSYADLGWCDEAFAIFLQLEKTDEYPMVRPNVVSWSAV 382
Query: 283 ISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECE 342
I GFA G G+EA+E F RMQ +K N VT SVL+ C+ + G +V
Sbjct: 383 IGGFASKGQGEEALELFRRMQLAKVKANSVTIASVLSVCAELAALHLGREIHGHVVRSL- 441
Query: 343 VLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERV 402
+ +I LI+M ++G ++ I E D++ W T++ HG +GE
Sbjct: 442 MDGNILVGNGLINMYTKSGSFKEGNLVFEKI--ENKDLISWNTMVAGYGIHG---LGENA 496
Query: 403 TRKILEM-ERGYGGDYVLMYNILAGVGRFGDAERLRRVMDE 442
R +M + G+ D V +L+ G R + D+
Sbjct: 497 IRTFDQMIKDGFEPDGVTFVAVLSACSHAGLVAEGRELFDK 537
>gi|48716903|dbj|BAD23598.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
Length = 755
Score = 236 bits (603), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 139/380 (36%), Positives = 202/380 (53%), Gaps = 42/380 (11%)
Query: 109 VYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPC 168
V+ TA+V+ Y G L+++ ++FD MPERN V+WN M+ ++ ++ A+ LF MPC
Sbjct: 255 VFTWTAVVSGYAQNGMLEEARRVFDAMPERNAVSWNAMVAAYIQRRMMDEAKELFNMMPC 314
Query: 169 RNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNG-DVKSCQ 227
RNV SW ++ GY + EA A+F M + ++ A+L A Q G ++ Q
Sbjct: 315 RNVASWNTMLTGYAQAGMLEEAKAVFDTM-----PQKDAVSWAAMLAAYSQGGCSEETLQ 369
Query: 228 LIHGYGE------KRGF-----TAFDIRVLNC----------------------LIDTYA 254
L G + F T DI L C L+ Y
Sbjct: 370 LFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYF 429
Query: 255 KCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTF 314
KCG + A FE++ E +++VSW ++I+G+A HG GKEA+E F M+ KP+ +T
Sbjct: 430 KCGNMEDARNAFEEM--EERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITL 487
Query: 315 LSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIP 374
+ VL ACSH GLVE+G+++F M + V +HY C+ID+LGRAGRL +A +P
Sbjct: 488 VGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMP 547
Query: 375 SEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAE 434
E D +W LLGA H N E+G KI E+E G YVL+ NI A G++ DA
Sbjct: 548 FE-PDSTMWGALLGASRIHRNPELGRSAAEKIFELEPENAGMYVLLSNIYASSGKWRDAR 606
Query: 435 RLRRVMDERNAFKVPGCSLV 454
++R +M+ER KVPG S +
Sbjct: 607 KMRVMMEERGVKKVPGFSWI 626
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 96/393 (24%), Positives = 179/393 (45%), Gaps = 64/393 (16%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCA-------T 86
+NTLLH +++ S A L+ ++ P+ DS TY+ +I + A
Sbjct: 103 YNTLLHALAVSSSLADARGLFDEM------------PVRDSVTYNVMISSHANHGLVSLA 150
Query: 87 LSHPNLGTQLHAVI----------------SKVGFQSH----VYVNTALVNMYVSLGFLK 126
+ +L + AV ++ F S V AL++ YV G +
Sbjct: 151 RHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDVISWNALMSGYVQWGKMS 210
Query: 127 DSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNR 186
++ +LFD MP R++V+WN+M++G + G++ AR LF+ P R+V +WT ++ GY +
Sbjct: 211 EARELFDRMPGRDVVSWNIMVSGYARRGDMVEARRLFDAAPVRDVFTWTAVVSGYAQNGM 270
Query: 187 SNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVL 246
EA +F M E + ++ A++ A Q + + + R ++
Sbjct: 271 LEEARRVFDAM-----PERNAVSWNAMVAAYIQRRMMDEAKELFNMMPCRNVASW----- 320
Query: 247 NCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVG 306
N ++ YA+ G + A +F+ ++ +K+ VSW ++++ ++ G +E ++ F M + G
Sbjct: 321 NTMLTGYAQAGMLEEAKAVFD--TMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCG 378
Query: 307 LKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGC-----LIDMLGRAG 361
NR F VL+ C+ +E G+ +++ + GC L+ M + G
Sbjct: 379 EWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGV------GCFVGNALLAMYFKCG 432
Query: 362 RLEQAEKTALGIPSEITDVVVWRTLLGACSFHG 394
+E A + E DVV W T++ + HG
Sbjct: 433 NMEDARNAFEEM--EERDVVSWNTMIAGYARHG 463
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 91/328 (27%), Positives = 153/328 (46%), Gaps = 27/328 (8%)
Query: 70 PLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSS 129
P + TY+ ++ + L L I + S+ NT L + VS L D+
Sbjct: 65 PRRSTSTYNAMLAGYSANGRLPLAASLFRAIPRPDNYSY---NTLLHALAVS-SSLADAR 120
Query: 130 KLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNE 189
LFDEMP R+ VT+NVMI+ G + AR F+ P ++ VSW G++ Y R R E
Sbjct: 121 GLFDEMPVRDSVTYNVMISSHANHGLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEE 180
Query: 190 ALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCL 249
A LF TE I+ A++ Q G + + + R D+ N +
Sbjct: 181 ARGLFNSR-----TEWDVISWNALMSGYVQWGKMSEARELFDRMPGR-----DVVSWNIM 230
Query: 250 IDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKP 309
+ YA+ G + A +LF+ V +++ +WT+++SG+A +GM +EA F M +
Sbjct: 231 VSGYARRGDMVEARRLFDAAPV--RDVFTWTAVVSGYAQNGMLEEARRVFDAMP----ER 284
Query: 310 NRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKT 369
N V++ +++ A +++E F+ M C ++ + ++ +AG LE+A+
Sbjct: 285 NAVSWNAMVAAYIQRRMMDEAKELFNMM--PCR---NVASWNTMLTGYAQAGMLEEAKAV 339
Query: 370 ALGIPSEITDVVVWRTLLGACSFHGNVE 397
+P + D V W +L A S G E
Sbjct: 340 FDTMPQK--DAVSWAAMLAAYSQGGCSE 365
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 98/228 (42%), Gaps = 38/228 (16%)
Query: 76 TYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEM 135
++ ++ TCA ++ G QLH + + G+ +V AL+ MY G ++D+ F+EM
Sbjct: 385 AFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEM 444
Query: 136 PERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFR 195
ER++V+WN MI GY R EAL +F
Sbjct: 445 EERDVVSWNTMIA-------------------------------GYARHGFGKEALEIF- 472
Query: 196 KMVACEYTEPSEITILAVLPAIWQNGDV-KSCQLIHGYGEKRGFTAFDIRVLNCLIDTYA 254
M+ T+P +IT++ VL A +G V K + G TA C+ID
Sbjct: 473 DMMRTTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHHDFGVTA-KPEHYTCMIDLLG 531
Query: 255 KCGCIFSASKLFEDISVERKNLVSWTSIISGFAMH---GMGKEAVENF 299
+ G + A L +D+ E + + W +++ +H +G+ A E
Sbjct: 532 RAGRLAEAHDLMKDMPFEPDSTM-WGALLGASRIHRNPELGRSAAEKI 578
Score = 39.3 bits (90), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 104/242 (42%), Gaps = 32/242 (13%)
Query: 204 EPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSAS 263
EP I + A + G V + + +R + + N ++ Y+ G + A+
Sbjct: 35 EPEVIRSNKAITAHMRAGRVADAERLFAAMPRRSTSTY-----NAMLAGYSANGRLPLAA 89
Query: 264 KLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNR--VTFLSVLNAC 321
LF ++ R + S+ +++ A+ +A F M P R VT+ ++++
Sbjct: 90 SLFR--AIPRPDNYSYNTLLHALAVSSSLADARGLFDEM------PVRDSVTYNVMISSH 141
Query: 322 SHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEIT--D 379
++ GLV ++FD E+ D + ++ R GR+E+A G+ + T D
Sbjct: 142 ANHGLVSLARHYFDLAPEK-----DAVSWNGMLAAYVRNGRVEEAR----GLFNSRTEWD 192
Query: 380 VVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRV 439
V+ W L+ G V+ G+ + L +R G D V +++G R GD RR+
Sbjct: 193 VISWNALMS-----GYVQWGKMSEAREL-FDRMPGRDVVSWNIMVSGYARRGDMVEARRL 246
Query: 440 MD 441
D
Sbjct: 247 FD 248
>gi|357131531|ref|XP_003567390.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g37570-like [Brachypodium distachyon]
Length = 531
Score = 236 bits (603), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 125/341 (36%), Positives = 203/341 (59%), Gaps = 5/341 (1%)
Query: 114 ALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVS 173
A+V +YV+ G + +FDEMP R+ +W+V+I G K G ++ AR LF++MP +N+V+
Sbjct: 184 AMVVVYVNAGDFASARLVFDEMPTRDSSSWSVLIVGYCKRGSMQSARELFDKMPGKNLVT 243
Query: 174 WTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYG 233
WT +I+GY + R E+++LFR++ A EP T++ V+ + Q G + Y
Sbjct: 244 WTAMINGYAQCGRPKESISLFRELEAVG-IEPDAATMVGVISSASQIGSTALAGWVGNYV 302
Query: 234 EKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGK 293
+++ + +VL L+D +AKCG + A F +I E+ + +T++ISG A HG
Sbjct: 303 DRKRIERNE-KVLTALVDMHAKCGNVEQALNCFREI--EQPDAYPYTALISGLATHGHST 359
Query: 294 EAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCL 353
A++ F RM+ ++P+ +TF+ VL ACSH GLV+ GL++++ MV++ + HY C+
Sbjct: 360 LALQVFERMRAQAVRPDPITFVGVLTACSHAGLVDMGLDYWEAMVQDYGMDRRADHYACV 419
Query: 354 IDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGY 413
+DMLGRAGR+ +A +P + LL AC H NVE+ E V K+ E+E
Sbjct: 420 VDMLGRAGRIVEAFDMVQTMPMGPHPGALG-ALLSACKTHDNVEIAEIVANKLFELEPRN 478
Query: 414 GGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
G+Y+L+ NI AG ++ +AER+R +M + FK PG + V
Sbjct: 479 TGNYILLSNIYAGKEQWEEAERIRSLMRTKLPFKQPGSTWV 519
>gi|147856499|emb|CAN78640.1| hypothetical protein VITISV_031739 [Vitis vinifera]
Length = 954
Score = 236 bits (603), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 129/370 (34%), Positives = 209/370 (56%), Gaps = 13/370 (3%)
Query: 93 GTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVK 152
G +H + K GF+++++V +L+ +Y G + + LF E+ +N+V+WN +I+
Sbjct: 290 GKVIHGYVVKGGFENYLFVKNSLICLYGKHGNVNAARILFLEIKTKNIVSWNALISSYAD 349
Query: 153 WGELEFARSLF------EEMPC--RNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTE 204
G + A ++F +E P NVVSW+ +I G+ + EAL LFR+M + +
Sbjct: 350 LGWCDEAFAIFLQLEKTDEYPMVRPNVVSWSAVIGGFASKGQGEEALELFRRMQLAK-VK 408
Query: 205 PSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASK 264
+ +TI +VL + + + IHG+ R +I V N LI+ Y K G +
Sbjct: 409 ANSVTIASVLSVCAELAALHLGREIHGH-VVRSLMDGNILVGNGLINMYTKSGSFKEGNL 467
Query: 265 LFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHG 324
+FE I E K+L+SW ++++G+ +HG+G+ A+ F +M K G +P+ VTF++VL+ACSH
Sbjct: 468 VFEKI--ENKDLISWNTMVAGYGIHGLGENAIRTFDQMIKDGFEPDGVTFVAVLSACSHA 525
Query: 325 GLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWR 384
GLV EG FDKM++E V P ++HY C++D+LGRAG L++A K +P E + VW
Sbjct: 526 GLVAEGRELFDKMIKEFRVEPQMEHYACMVDLLGRAGLLQEASKVVKSMPVE-PNACVWG 584
Query: 385 TLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERN 444
LL +C H N E+ E +I + G Y+L+ NI A GR+ D+ ++R +
Sbjct: 585 ALLNSCRMHKNTEVAEETASQIFNLNSEIAGSYMLLSNIYAASGRWEDSAKVRISAKTKG 644
Query: 445 AFKVPGCSLV 454
K PG S +
Sbjct: 645 LKKTPGQSWI 654
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 120/461 (26%), Positives = 202/461 (43%), Gaps = 63/461 (13%)
Query: 24 TNSLLHHSQLFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRT 83
+N LL +S L + H Y ++A +Y +++++ + D FT+ +IR
Sbjct: 98 SNLLLWNSILRANVAHGYC-----EEALEIYCRMRKLGVSA--------DGFTFPLVIRA 144
Query: 84 CATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTW 143
CA + L +H + ++GFQ +++V L+ MY +G + D+ K+F+ M R+ V+W
Sbjct: 145 CALMGSRKLCRSVHGHVVEMGFQWNLHVGNELMGMYGKIGRMDDARKVFERMAVRSCVSW 204
Query: 144 NVMITGLVKWGELEFARSLFEEMPCR----NVVSWTGIIDGYTRMNRSNEALALFRKMVA 199
N M++G + A +F M N+V+WT ++ + R + E + LF +M
Sbjct: 205 NTMVSGYALNYDCHGASEMFRMMGSAGLEPNLVTWTSLLSSHARCGQHVETMELFGRMRM 264
Query: 200 CEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCI 259
+E + VL ++IHGY K GF + + V N LI Y K G +
Sbjct: 265 RGIGATAE-ALAVVLSVSVDLAAFDEGKVIHGYVVKGGFENY-LFVKNSLICLYGKHGNV 322
Query: 260 FSASKLFEDISVE-------------------------------------RKNLVSWTSI 282
+A LF +I + R N+VSW+++
Sbjct: 323 NAARILFLEIKTKNIVSWNALISSYADLGWCDEAFAIFLQLEKTDEYPMVRPNVVSWSAV 382
Query: 283 ISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECE 342
I GFA G G+EA+E F RMQ +K N VT SVL+ C+ + G +V
Sbjct: 383 IGGFASKGQGEEALELFRRMQLAKVKANSVTIASVLSVCAELAALHLGREIHGHVVRSL- 441
Query: 343 VLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERV 402
+ +I LI+M ++G ++ I E D++ W T++ HG +GE
Sbjct: 442 MDGNILVGNGLINMYTKSGSFKEGNLVFEKI--ENKDLISWNTMVAGYGIHG---LGENA 496
Query: 403 TRKILEM-ERGYGGDYVLMYNILAGVGRFGDAERLRRVMDE 442
R +M + G+ D V +L+ G R + D+
Sbjct: 497 IRTFDQMIKDGFEPDGVTFVAVLSACSHAGLVAEGRELFDK 537
>gi|357507131|ref|XP_003623854.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498869|gb|AES80072.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 865
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 138/384 (35%), Positives = 215/384 (55%), Gaps = 9/384 (2%)
Query: 73 DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLF 132
+ T S ++ CA L G ++H + G +++V +ALV++Y ++++ +F
Sbjct: 264 NPMTVSSILPACAELKDLKSGKEIHGFAVRHGMVVNLFVCSALVSLYAKCLSVREARMVF 323
Query: 133 DEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNV----VSWTGIIDGYTRMNRSN 188
D MP R++V+WN ++T K E E SLF +M V +W +I G RS
Sbjct: 324 DLMPHRDVVSWNGVLTAYFKNKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCMENGRSE 383
Query: 189 EALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNC 248
EA+ +FRKM + +P+EITI ++LPA + +++ + IH Y R + D+
Sbjct: 384 EAVEMFRKMQKMGF-KPNEITISSILPACSFSENLRMGKEIHCY-VFRHWKVGDLTSTTA 441
Query: 249 LIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLK 308
L+ YAKCG + + +F+ + RK++V+W ++I AMHG GKEA+ F +M ++
Sbjct: 442 LLYMYAKCGDLNLSRNVFD--MMRRKDVVAWNTMIIANAMHGNGKEALFLFDKMLLSRVQ 499
Query: 309 PNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEK 368
PN VTF VL+ CSH LVEEG+ F+ M + V PD HY C++D+ RAGRL +A K
Sbjct: 500 PNSVTFTGVLSGCSHSRLVEEGVQIFNSMGRDHLVEPDANHYSCVVDIYSRAGRLNEAYK 559
Query: 369 TALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVG 428
G+P E T W LL AC + NVE+ + +K+ E+E G+YV ++NIL
Sbjct: 560 FIQGMPMEPT-ASAWGALLAACRVYKNVELAKISAKKLFEIEPNNPGNYVSLFNILVTAK 618
Query: 429 RFGDAERLRRVMDERNAFKVPGCS 452
+ +A ++R +M ER K PGCS
Sbjct: 619 MWSEASQVRILMKERGITKTPGCS 642
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 102/441 (23%), Positives = 178/441 (40%), Gaps = 96/441 (21%)
Query: 7 SQTPNNITTQIHSHL--------LTTNSLLHHSQLFN-----------TLLHFYSLAESP 47
+ P ++ T I SHL L QLF+ TL+ +
Sbjct: 86 AMVPPSLPTNIPSHLGLRLIRVALNVGDFNRARQLFDNIPQPDPTTCSTLISALTTHGLS 145
Query: 48 QKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQS 107
+A +Y LQ+ P P+F + + CA ++H ++ G S
Sbjct: 146 NEAIKIYSSLQE---RGIKPDMPVFLAAA-----KACAVSGDALRVKEVHDDATRCGVMS 197
Query: 108 HVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMP 167
V+V AL++ Y ++ + ++FD++ R++V+W + + VK G +F EM
Sbjct: 198 DVFVGNALIHAYGKCKCVEGARRVFDDLVVRDVVSWTSLSSCYVKCGFPRKGMDVFREM- 256
Query: 168 CRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQ 227
W+G+ +P+ +T+ ++LPA + D+KS +
Sbjct: 257 -----GWSGV--------------------------KPNPMTVSSILPACAELKDLKSGK 285
Query: 228 LIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFE-------------------- 267
IHG+ + G ++ V + L+ YAKC + A +F+
Sbjct: 286 EIHGFAVRHGMVV-NLFVCSALVSLYAKCLSVREARMVFDLMPHRDVVSWNGVLTAYFKN 344
Query: 268 -----------DISVE--RKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTF 314
+S + R + +W ++I G +G +EAVE F +MQK+G KPN +T
Sbjct: 345 KEYEKGFSLFLKMSRDGVRADEATWNAVIGGCMENGRSEEAVEMFRKMQKMGFKPNEITI 404
Query: 315 LSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIP 374
S+L ACS + G + +V D+ L+ M + G L + +
Sbjct: 405 SSILPACSFSENLRMGKEIHCYVFRHWKV-GDLTSTTALLYMYAKCGDLNLSRNVFDMMR 463
Query: 375 SEITDVVVWRTLLGACSFHGN 395
+ DVV W T++ A + HGN
Sbjct: 464 RK--DVVAWNTMIIANAMHGN 482
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 77/318 (24%), Positives = 138/318 (43%), Gaps = 23/318 (7%)
Query: 73 DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLF 132
+ T S ++ C+ + +G ++H + + + TAL+ MY G L S +F
Sbjct: 400 NEITISSILPACSFSENLRMGKEIHCYVFRHWKVGDLTSTTALLYMYAKCGDLNLSRNVF 459
Query: 133 DEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCR----NVVSWTGIIDGYTRMNRSN 188
D M +++V WN MI G + A LF++M N V++TG++ G +
Sbjct: 460 DMMRRKDVVAWNTMIIANAMHGNGKEALFLFDKMLLSRVQPNSVTFTGVLSGCSHSRLVE 519
Query: 189 EALALFRKMVACEYTEPSEITILAVLPAIWQNGDV-KSCQLIHGYGEKRGFTAFDIRVLN 247
E + +F M EP V+ + G + ++ + I G + +A+ +
Sbjct: 520 EGVQIFNSMGRDHLVEPDANHYSCVVDIYSRAGRLNEAYKFIQGMPMEPTASAWGALLAA 579
Query: 248 CLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGL 307
C + + I SA KLFE +E N ++ S+ + M EA + M++ G+
Sbjct: 580 CRVYKNVELAKI-SAKKLFE---IEPNNPGNYVSLFNILVTAKMWSEASQVRILMKERGI 635
Query: 308 -KPNRVTFLSVLNACSHGGLV--------EEGLNFFDKMVEECEVL---PDIKHYGCLID 355
K ++L V N H +V ++ NF D++VE+ ++ PD + ID
Sbjct: 636 TKTPGCSWLQVGNKV-HTFVVGDKSNIESDKIYNFLDELVEKMKMAGYKPDTDYVLQDID 694
Query: 356 MLGRAGRL-EQAEKTALG 372
+A L +EK A+
Sbjct: 695 QEEKAESLCNHSEKLAVA 712
>gi|125563252|gb|EAZ08632.1| hypothetical protein OsI_30906 [Oryza sativa Indica Group]
Length = 755
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 139/380 (36%), Positives = 202/380 (53%), Gaps = 42/380 (11%)
Query: 109 VYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPC 168
V+ TA+V+ Y G L+++ ++FD MPERN V+WN M+ ++ ++ A+ LF MPC
Sbjct: 255 VFTWTAVVSGYAQNGMLEEARRVFDAMPERNAVSWNAMVAAYIQRRMMDEAKELFNMMPC 314
Query: 169 RNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNG-DVKSCQ 227
RNV SW ++ GY + EA A+F M + ++ A+L A Q G ++ Q
Sbjct: 315 RNVASWNTMLTGYAQAGMLEEAKAVFDTM-----PQKDAVSWAAMLAAYSQGGCSEETLQ 369
Query: 228 LIHGYGE------KRGF-----TAFDIRVLNC----------------------LIDTYA 254
L G + F T DI L C L+ Y
Sbjct: 370 LFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYF 429
Query: 255 KCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTF 314
KCG + A FE++ E +++VSW ++I+G+A HG GKEA+E F M+ KP+ +T
Sbjct: 430 KCGNMEDARNAFEEM--EERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITL 487
Query: 315 LSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIP 374
+ VL ACSH GLVE+G+++F M + V +HY C+ID+LGRAGRL +A +P
Sbjct: 488 VGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMP 547
Query: 375 SEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAE 434
E D +W LLGA H N E+G KI E+E G YVL+ NI A G++ DA
Sbjct: 548 FE-PDSTMWGALLGASRIHRNPELGRSAAEKIFELEPENAGMYVLLSNIYASSGKWRDAR 606
Query: 435 RLRRVMDERNAFKVPGCSLV 454
++R +M+ER KVPG S +
Sbjct: 607 KMRVMMEERGVKKVPGFSWI 626
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 95/393 (24%), Positives = 179/393 (45%), Gaps = 64/393 (16%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCA-------T 86
+NTLLH +++ S A L+ ++ P+ DS TY+ +I + A
Sbjct: 103 YNTLLHALAVSSSLADARGLFDEM------------PVRDSVTYNVMISSHANHGLVSLA 150
Query: 87 LSHPNLGTQLHAVI----------------SKVGFQSHVYVNT----ALVNMYVSLGFLK 126
+ +L + AV ++ F S + AL++ YV G +
Sbjct: 151 RHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDAISWNALMSGYVQWGKMS 210
Query: 127 DSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNR 186
++ +LFD MP R++V+WN+M++G + G++ AR LF+ P R+V +WT ++ GY +
Sbjct: 211 EARELFDRMPGRDVVSWNIMVSGYARRGDMVEARRLFDAAPVRDVFTWTAVVSGYAQNGM 270
Query: 187 SNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVL 246
EA +F M E + ++ A++ A Q + + + R ++
Sbjct: 271 LEEARRVFDAM-----PERNAVSWNAMVAAYIQRRMMDEAKELFNMMPCRNVASW----- 320
Query: 247 NCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVG 306
N ++ YA+ G + A +F+ ++ +K+ VSW ++++ ++ G +E ++ F M + G
Sbjct: 321 NTMLTGYAQAGMLEEAKAVFD--TMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCG 378
Query: 307 LKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGC-----LIDMLGRAG 361
NR F VL+ C+ +E G+ +++ + GC L+ M + G
Sbjct: 379 EWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGV------GCFVGNALLAMYFKCG 432
Query: 362 RLEQAEKTALGIPSEITDVVVWRTLLGACSFHG 394
+E A + E DVV W T++ + HG
Sbjct: 433 NMEDARNAFEEM--EERDVVSWNTMIAGYARHG 463
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 91/328 (27%), Positives = 153/328 (46%), Gaps = 27/328 (8%)
Query: 70 PLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSS 129
P + TY+ ++ + L L I + S+ NT L + VS L D+
Sbjct: 65 PRRSTSTYNAMLAGYSANGRLPLAASLFRAIPRPDNYSY---NTLLHALAVS-SSLADAR 120
Query: 130 KLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNE 189
LFDEMP R+ VT+NVMI+ G + AR F+ P ++ VSW G++ Y R R E
Sbjct: 121 GLFDEMPVRDSVTYNVMISSHANHGLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEE 180
Query: 190 ALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCL 249
A LF TE I+ A++ Q G + + + R D+ N +
Sbjct: 181 ARGLFNSR-----TEWDAISWNALMSGYVQWGKMSEARELFDRMPGR-----DVVSWNIM 230
Query: 250 IDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKP 309
+ YA+ G + A +LF+ V +++ +WT+++SG+A +GM +EA F M +
Sbjct: 231 VSGYARRGDMVEARRLFDAAPV--RDVFTWTAVVSGYAQNGMLEEARRVFDAMP----ER 284
Query: 310 NRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKT 369
N V++ +++ A +++E F+ M C ++ + ++ +AG LE+A+
Sbjct: 285 NAVSWNAMVAAYIQRRMMDEAKELFNMM--PCR---NVASWNTMLTGYAQAGMLEEAKAV 339
Query: 370 ALGIPSEITDVVVWRTLLGACSFHGNVE 397
+P + D V W +L A S G E
Sbjct: 340 FDTMPQK--DAVSWAAMLAAYSQGGCSE 365
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 98/228 (42%), Gaps = 38/228 (16%)
Query: 76 TYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEM 135
++ ++ TCA ++ G QLH + + G+ +V AL+ MY G ++D+ F+EM
Sbjct: 385 AFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEM 444
Query: 136 PERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFR 195
ER++V+WN MI GY R EAL +F
Sbjct: 445 EERDVVSWNTMIA-------------------------------GYARHGFGKEALEIF- 472
Query: 196 KMVACEYTEPSEITILAVLPAIWQNGDV-KSCQLIHGYGEKRGFTAFDIRVLNCLIDTYA 254
M+ T+P +IT++ VL A +G V K + G TA C+ID
Sbjct: 473 DMMRTTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHHDFGVTA-KPEHYTCMIDLLG 531
Query: 255 KCGCIFSASKLFEDISVERKNLVSWTSIISGFAMH---GMGKEAVENF 299
+ G + A L +D+ E + + W +++ +H +G+ A E
Sbjct: 532 RAGRLAEAHDLMKDMPFEPDSTM-WGALLGASRIHRNPELGRSAAEKI 578
>gi|147766033|emb|CAN70212.1| hypothetical protein VITISV_038740 [Vitis vinifera]
Length = 724
Score = 236 bits (602), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 143/461 (31%), Positives = 236/461 (51%), Gaps = 60/461 (13%)
Query: 17 IHSHLLTTNSLLHHSQLFNTLLHFYS-----------LAESPQKAFLLYKQLQQIYTHSH 65
+H+HL+ ++ L +H L N +++ Y+ E P K + + L ++ ++
Sbjct: 109 VHAHLVDSHFLDNHLVLQNIIVNMYAKCGCLDDARRMFDEMPTKDMVTWTALIAGFSQNN 168
Query: 66 SPLPPLF------------DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNT 113
P L + FT S L++ + + GTQLHA K G+QS VYV +
Sbjct: 169 RPRDALLLFPQMLRLGLQPNHFTLSSLLKASGSEHGLDPGTQLHAFCLKYGYQSSVYVGS 228
Query: 114 ALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVS 173
ALV+MY + G ++ A+ F+ MP ++ VS
Sbjct: 229 ALVDMYA-------------------------------RCGHMDAAQLAFDGMPTKSEVS 257
Query: 174 WTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYG 233
W +I G+ R AL L KM + +P+ T +V A G ++ + +H +
Sbjct: 258 WNALISGHARKGEGEHALHLLWKMQRKNF-QPTHFTYSSVFSACASIGALEQGKWVHAHM 316
Query: 234 EKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGK 293
K G + N L+D YAK G I A ++F+ + + ++VSW ++++G A HG+GK
Sbjct: 317 IKSGLKLIAF-IGNTLLDMYAKAGSIDDAKRVFDRLV--KPDVVSWNTMLTGCAQHGLGK 373
Query: 294 EAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCL 353
E ++ F +M ++G++PN ++FL VL ACSH GL++EGL +F+ ++++ +V PD+ HY
Sbjct: 374 ETLDRFEQMLRIGIEPNEISFLCVLTACSHSGLLDEGLYYFE-LMKKYKVEPDVPHYVTF 432
Query: 354 IDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGY 413
+D+LGR G L++AE+ +P E T VW LLGAC H N+E+G + E++
Sbjct: 433 VDLLGRVGLLDRAERFIREMPIEPT-AAVWGALLGACRMHKNMELGVYAAERAFELDPHD 491
Query: 414 GGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
G +L+ NI A GR+ D ++R++M E K P CS V
Sbjct: 492 SGPRMLLSNIYASAGRWRDVAKVRKMMKESGVKKQPACSWV 532
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 99/194 (51%), Gaps = 14/194 (7%)
Query: 221 GDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWT 280
G V+ +++H + F + + N +++ YAKCGC+ A ++F+++ K++V+WT
Sbjct: 101 GKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCGCLDDARRMFDEMPT--KDMVTWT 158
Query: 281 SIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEE 340
++I+GF+ + ++A+ F +M ++GL+PN T S+L A E GL+ ++
Sbjct: 159 ALIAGFSQNNRPRDALLLFPQMLRLGLQPNHFTLSSLLKASGS----EHGLDPGTQLHAF 214
Query: 341 C---EVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVE 397
C + L+DM R G ++ A+ G+P++ V W L+ S H
Sbjct: 215 CLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTK--SEVSWNALI---SGHARKG 269
Query: 398 MGERVTRKILEMER 411
GE + +M+R
Sbjct: 270 EGEHALHLLWKMQR 283
>gi|359482011|ref|XP_002276416.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Vitis vinifera]
Length = 629
Score = 236 bits (602), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 153/432 (35%), Positives = 218/432 (50%), Gaps = 52/432 (12%)
Query: 29 HHSQ----LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTC 84
HHS+ +N L+ YSL A LL++Q+++ ++ T LI C
Sbjct: 118 HHSRNLAVCYNALIAGYSLNSRFSDAVLLFRQMRKEGVS--------VNAVTMLGLIPVC 169
Query: 85 ATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWN 144
A H GT LHA + G + V L+ MYV G + + KLFD MPE+ L+TWN
Sbjct: 170 AGPIHLGFGTSLHACSVRFGLDGDLSVGNCLLTMYVRCGSVDFARKLFDGMPEKGLITWN 229
Query: 145 VMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTE 204
MI+ GY + + L L+RKM E+T
Sbjct: 230 AMIS-------------------------------GYAQNGLAGHVLDLYRKM---EFTG 255
Query: 205 --PSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSA 262
P +T++ VL + G + + + E GF F+ + N LI+ YA+CG + A
Sbjct: 256 IVPDPVTLVGVLSSCAHLGAHAAGREVEQRIELSGF-GFNPFLKNALINMYARCGNLVKA 314
Query: 263 SKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACS 322
+F+ ++ KN++SWT+II+G+ MHG G+ AV+ F M P+ F+SVL+ACS
Sbjct: 315 RAIFDGMT--EKNVISWTAIIAGYGMHGQGELAVQLFDEMISSDELPDGAAFVSVLSACS 372
Query: 323 HGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVV 382
H GL E+GL +F M + + P +HY C++D+LGRAGRLE+A K +G S D V
Sbjct: 373 HAGLTEKGLYYFTAMERDYGLQPGPEHYSCVVDLLGRAGRLEEARKL-IGSMSVEPDGAV 431
Query: 383 WRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDE 442
W LLGAC H NVE+ E K++E E G YVL+ NI + G R+R +M E
Sbjct: 432 WGALLGACKIHRNVELAELAFEKVIEFEPTNIGYYVLLSNIFSEAGNMEGILRVRVMMRE 491
Query: 443 RNAFKVPGCSLV 454
R K PGCS V
Sbjct: 492 RKLKKEPGCSYV 503
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 100/227 (44%), Gaps = 13/227 (5%)
Query: 172 VSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHG 231
SW + R EAL L+ +M+A P+ T + + +HG
Sbjct: 22 ASWNARLRELARQRHFQEALNLYCQMLA-SGDSPNAFTFPFAFKSCASLSLPLAGSQLHG 80
Query: 232 YGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGM 291
+ K G + V LI Y KC I SA K+F++ R V + ++I+G++++
Sbjct: 81 HVIKTGCEP-EPFVQTSLISMYCKCSTIASARKVFDENHHSRNLAVCYNALIAGYSLNSR 139
Query: 292 GKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVL----PDI 347
+AV F +M+K G+ N VT L ++ C+ G + G F + C V D+
Sbjct: 140 FSDAVLLFRQMRKEGVSVNAVTMLGLIPVCA--GPIHLG---FGTSLHACSVRFGLDGDL 194
Query: 348 KHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHG 394
CL+ M R G ++ A K G+P + ++ W ++ + +G
Sbjct: 195 SVGNCLLTMYVRCGSVDFARKLFDGMPEK--GLITWNAMISGYAQNG 239
>gi|297739711|emb|CBI29893.3| unnamed protein product [Vitis vinifera]
Length = 784
Score = 236 bits (602), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 128/384 (33%), Positives = 223/384 (58%), Gaps = 38/384 (9%)
Query: 73 DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLF 132
+ FT++ ++ +C + S LG Q+H+++ K F+SH++V ++L++MY G + ++ ++F
Sbjct: 110 NEFTFATVLTSCTSSSGFQLGRQIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVF 169
Query: 133 DEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALA 192
D +PER++V+ +I+ GY ++ EAL
Sbjct: 170 DGLPERDVVSCTAIIS-------------------------------GYAQLGLDEEALD 198
Query: 193 LFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDT 252
LFR++ E + +T +VL A+ + + +H + R F + + N LID
Sbjct: 199 LFRRLQR-EGMRSNYVTYASVLTALSGLAALDHGRQVHSH-VLRAKLPFYVVLQNSLIDM 256
Query: 253 YAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVG-LKPNR 311
Y+KCG + + ++F+ S+ + ++SW +++ G++ HG+G+EAVE F M++ +KP+
Sbjct: 257 YSKCGSLTYSRRIFD--SMPERTVISWNAMLVGYSKHGLGREAVELFKLMKEENKVKPDS 314
Query: 312 VTFLSVLNACSHGGLVEEGLNFFDKMVEECEVL-PDIKHYGCLIDMLGRAGRLEQAEKTA 370
VTFL+VL+ CSHGG+ + GL F +MV + + P+I+HYGC++D+ GRAGR+E+A +
Sbjct: 315 VTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEEAFEFI 374
Query: 371 LGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRF 430
+P E T +W +LLGAC H NV +GE V R++LE+E G+YV++ N+ A GR+
Sbjct: 375 KKMPFEPT-AAIWGSLLGACRVHQNVHIGEFVARRLLEIESENAGNYVILSNLYASAGRW 433
Query: 431 GDAERLRRVMDERNAFKVPGCSLV 454
D +R +M E+ K PG S +
Sbjct: 434 DDVRTVRELMKEKAVIKEPGRSWI 457
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 103/362 (28%), Positives = 168/362 (46%), Gaps = 45/362 (12%)
Query: 77 YSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMP 136
Y ++ C + + G ++HA + K ++ VY+ T L+ +Y L D
Sbjct: 13 YDSVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGD--------- 63
Query: 137 ERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRK 196
AR + +EMP RNVVSWT +I GY++ ++EAL LF +
Sbjct: 64 ----------------------ARRVLDEMPERNVVSWTAMISGYSQRGYASEALHLFVE 101
Query: 197 MVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKC 256
M+ T P+E T VL + + + + IH K F + I V + L+D YAK
Sbjct: 102 MLMSG-TAPNEFTFATVLTSCTSSSGFQLGRQIHSLVIKTSFESH-IFVGSSLLDMYAKA 159
Query: 257 GCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLS 316
G I A ++F+ + +++VS T+IISG+A G+ +EA++ F R+Q+ G++ N VT+ S
Sbjct: 160 GKICEARRVFDGLP--ERDVVSCTAIISGYAQLGLDEEALDLFRRLQREGMRSNYVTYAS 217
Query: 317 VLNACSHGGLVEEGLNFFDKMVEECEVLP-DIKHYGCLIDMLGRAGRLEQAEKTALGIPS 375
VL A S ++ G ++ LP + LIDM + G L + + +P
Sbjct: 218 VLTALSGLAALDHGRQVHSHVLR--AKLPFYVVLQNSLIDMYSKCGSLTYSRRIFDSMPE 275
Query: 376 EITDVVVWRTLLGACSFHGNVEMGERVTR--KILEMERGYGGDYVLMYNILAGVGRFGDA 433
V+ W +L S HG +G K+++ E D V +L+G G
Sbjct: 276 RT--VISWNAMLVGYSKHG---LGREAVELFKLMKEENKVKPDSVTFLAVLSGCSHGGME 330
Query: 434 ER 435
+R
Sbjct: 331 DR 332
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 92/201 (45%), Gaps = 7/201 (3%)
Query: 249 LIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLK 308
LI Y KC C+ A ++ +++ +N+VSWT++ISG++ G EA+ F M G
Sbjct: 51 LIVLYNKCRCLGDARRVLDEMP--ERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTA 108
Query: 309 PNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEK 368
PN TF +VL +C+ + G +V + I L+DM +AG++ +A +
Sbjct: 109 PNEFTFATVLTSCTSSSGFQLGRQIH-SLVIKTSFESHIFVGSSLLDMYAKAGKICEARR 167
Query: 369 TALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVG 428
G+P DVV ++ + G E + R++ G +YV ++L +
Sbjct: 168 VFDGLPER--DVVSCTAIISGYAQLGLDEEALDLFRRL--QREGMRSNYVTYASVLTALS 223
Query: 429 RFGDAERLRRVMDERNAFKVP 449
+ R+V K+P
Sbjct: 224 GLAALDHGRQVHSHVLRAKLP 244
>gi|356540339|ref|XP_003538647.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g22690-like [Glycine max]
Length = 836
Score = 236 bits (602), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 137/420 (32%), Positives = 228/420 (54%), Gaps = 13/420 (3%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNL 92
++NT++ Y E ++ ++ Q P P D T I CA L ++
Sbjct: 299 MYNTIMSNYVHHEWASDVLVILDEMLQ-----KGPRP---DKVTMLSTIAACAQLGDLSV 350
Query: 93 GTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVK 152
G HA + + G + ++ A+++MY+ G + + K+F+ MP + +VTWN +I GLV+
Sbjct: 351 GKSSHAYVLRNGLEGWDNISNAIIDMYMKCGKREAACKVFEHMPNKTVVTWNSLIAGLVR 410
Query: 153 WGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILA 212
G++E A +F+EM R++VSW +I +++ EA+ LFR+M + +T++
Sbjct: 411 DGDMELAWRIFDEMLERDLVSWNTMIGALVQVSMFEEAIELFREMQN-QGIPGDRVTMVG 469
Query: 213 VLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVE 272
+ A G + + + Y EK D+++ L+D +++CG SA +F+ +E
Sbjct: 470 IASACGYLGALDLAKWVCTYIEKNDIHV-DLQLGTALVDMFSRCGDPSSAMHVFK--RME 526
Query: 273 RKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLN 332
++++ +WT+ I AM G + A+E F M + +KP+ V F+++L ACSHGG V++G
Sbjct: 527 KRDVSAWTAAIGVMAMEGNTEGAIELFNEMLEQKVKPDDVVFVALLTACSHGGSVDQGRQ 586
Query: 333 FFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSF 392
F M + + P I HYGC++D+LGRAG LE+A +P E D VVW +LL AC
Sbjct: 587 LFWSMEKAHGIRPHIVHYGCMVDLLGRAGLLEEAVDLIQSMPIEPND-VVWGSLLAACRK 645
Query: 393 HGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCS 452
H NVE+ K+ ++ G +VL+ NI A G++ D R+R M E+ KVPG S
Sbjct: 646 HKNVELAHYAAEKLTQLAPERVGIHVLLSNIYASAGKWTDVARVRLQMKEKGVQKVPGSS 705
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 112/429 (26%), Positives = 198/429 (46%), Gaps = 74/429 (17%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNL 92
++N L+ Y+ A +A LLY Q+ + +P D +T+ FL+ C+ + +
Sbjct: 97 MYNCLIRGYASAGLGDQAILLYVQMLVM-----GIVP---DKYTFPFLLSACSKILALSE 148
Query: 93 GTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVK 152
G Q+H + K+G + ++V+ +L++ Y G + KLFD M ERN+V+W
Sbjct: 149 GVQVHGAVLKMGLEGDIFVSNSLIHFYAECGKVDLGRKLFDGMLERNVVSW--------- 199
Query: 153 WGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILA 212
T +I+GY+ + S EA++LF +M EP+ +T++
Sbjct: 200 ----------------------TSLINGYSGRDLSKEAVSLFFQMGEAG-VEPNPVTMVC 236
Query: 213 VLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVE 272
V+ A + D++ + + Y + G I V N L+D Y KCG I +A ++F++ +
Sbjct: 237 VISACAKLKDLELGKKVCSYISELGMELSTIMV-NALVDMYMKCGDICAARQIFDECA-- 293
Query: 273 RKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNAC----------- 321
KNLV + +I+S + H + + M + G +P++VT LS + AC
Sbjct: 294 NKNLVMYNTIMSNYVHHEWASDVLVILDEMLQKGPRPDKVTMLSTIAACAQLGDLSVGKS 353
Query: 322 SHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVV 381
SH ++ GL +D + +IDM + G+ E A K +P++ VV
Sbjct: 354 SHAYVLRNGLEGWDNI------------SNAIIDMYMKCGKREAACKVFEHMPNKT--VV 399
Query: 382 VWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMD 441
W +L+ G++E+ R+ ++LE + + M L V F +A L R M
Sbjct: 400 TWNSLIAGLVRDGDMELAWRIFDEMLERDL---VSWNTMIGALVQVSMFEEAIELFREMQ 456
Query: 442 ERNAFKVPG 450
+ +PG
Sbjct: 457 NQG---IPG 462
Score = 45.4 bits (106), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 88/197 (44%), Gaps = 8/197 (4%)
Query: 246 LNCLIDTYAKCGCIFS---ASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRM 302
LN LI + + G + S A F D +L + +I G+A G+G +A+ + +M
Sbjct: 62 LNKLIASSVQIGTLESLDYARNAFGDDDGNMASLFMYNCLIRGYASAGLGDQAILLYVQM 121
Query: 303 QKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGR 362
+G+ P++ TF +L+ACS + EG+ ++ + + DI LI G+
Sbjct: 122 LVMGIVPDKYTFPFLLSACSKILALSEGVQVHGAVL-KMGLEGDIFVSNSLIHFYAECGK 180
Query: 363 LEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYN 422
++ K G+ +VV W +L+ + G E V+ E G + V M
Sbjct: 181 VDLGRKLFDGMLER--NVVSWTSLING--YSGRDLSKEAVSLFFQMGEAGVEPNPVTMVC 236
Query: 423 ILAGVGRFGDAERLRRV 439
+++ + D E ++V
Sbjct: 237 VISACAKLKDLELGKKV 253
>gi|225430696|ref|XP_002266026.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g47840 [Vitis vinifera]
Length = 713
Score = 236 bits (602), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 135/398 (33%), Positives = 214/398 (53%), Gaps = 38/398 (9%)
Query: 57 LQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALV 116
+Q S + P + +T++ +I CA L+ G QLHA+I +G + + V +++
Sbjct: 303 VQAFIRMRESDVSP--NEYTFAAVISGCANLARIEWGEQLHALILHLGLAASLSVENSIM 360
Query: 117 NMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTG 176
MY G L SS +F EM R++VSW+
Sbjct: 361 TMYAKCGQLTSSS-------------------------------VIFHEMTRRDIVSWST 389
Query: 177 IIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKR 236
II GY++ +EA L M E +P+E + +VL A ++ + +H Y
Sbjct: 390 IIAGYSQGGHVSEAFELLSWM-RMEGPKPTEFALASVLSACGNMAILEHGKQLHAYVLSI 448
Query: 237 GFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAV 296
G + VL+ LI+ Y KCG I AS++F+ + E ++VSWT++I+G+A HG +E +
Sbjct: 449 GLEHTAM-VLSALINMYCKCGSIEEASRIFD--AAENDDIVSWTAMINGYAEHGYSREVI 505
Query: 297 ENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDM 356
+ F ++ +VGL+P+ VTF+ VL+ACSH GLV+ G +F+ M ++ ++ P +HYGC+ID+
Sbjct: 506 DLFEKIPRVGLRPDSVTFIGVLSACSHAGLVDLGFRYFNAMSKKYQISPSKEHYGCMIDL 565
Query: 357 LGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGD 416
L RAGRL AE +P D VVW TLL AC HG+VE G R +IL++E G
Sbjct: 566 LCRAGRLSDAEHMIEAMPFHRDD-VVWSTLLRACRVHGDVERGRRTAERILQLEPNCAGT 624
Query: 417 YVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
++ + NI A G++ +A +R++M + K PG S +
Sbjct: 625 HITLANIYASKGKWREAADIRKLMKSKGVIKEPGWSWI 662
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 90/341 (26%), Positives = 159/341 (46%), Gaps = 50/341 (14%)
Query: 72 FDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKL 131
+DS+T++ ++ CA N G ++HA K GF +V L MY G L+ L
Sbjct: 215 YDSYTFAIALKACADSGALNYGREIHAQAMKKGFDVSSFVANTLATMYNKCGKLEYGLTL 274
Query: 132 FDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEAL 191
F++M R++V+W +IT LV+ G+ E A + + RM S+
Sbjct: 275 FEKMSMRDVVSWTTIITTLVQMGQEECA------------------VQAFIRMRESD--- 313
Query: 192 ALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLID 251
P+E T AV+ ++ + +H G A + V N ++
Sbjct: 314 -----------VSPNEYTFAAVISGCANLARIEWGEQLHALILHLGLAA-SLSVENSIMT 361
Query: 252 TYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNR 311
YAKCG + S+S +F +++ R+++VSW++II+G++ G EA E M+ G KP
Sbjct: 362 MYAKCGQLTSSSVIFHEMT--RRDIVSWSTIIAGYSQGGHVSEAFELLSWMRMEGPKPTE 419
Query: 312 VTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYG----CLIDMLGRAGRLEQAE 367
SVL+AC + ++E G K + + ++H LI+M + G +E+A
Sbjct: 420 FALASVLSACGNMAILEHG-----KQLHAYVLSIGLEHTAMVLSALINMYCKCGSIEEAS 474
Query: 368 KTALGIPSEITDVVVWRTLLGACSFHGN----VEMGERVTR 404
+ + +E D+V W ++ + HG +++ E++ R
Sbjct: 475 R--IFDAAENDDIVSWTAMINGYAEHGYSREVIDLFEKIPR 513
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 102/365 (27%), Positives = 161/365 (44%), Gaps = 49/365 (13%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+ TL+ Y A +A LL+K ++ S L D F S + C S N G
Sbjct: 83 WTTLISGYVNANDSSEALLLFKNMR-----VESGLR--IDPFILSLAHKACGLNSDVNYG 135
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
LH K G + V+V +AL++MY G + + ++F EMP RN+V+W +ITGLV+
Sbjct: 136 ELLHGYAVKTGLVNSVFVGSALLDMYTKNGKIFEGRRVFHEMPMRNVVSWTAIITGLVR- 194
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
GY + EAL F +M E T
Sbjct: 195 -------------------------AGYNK-----EALVYFSEMWRSR-VEYDSYTFAIA 223
Query: 214 LPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVER 273
L A +G + + IH K+GF V N L Y KCG + LFE +S+
Sbjct: 224 LKACADSGALNYGREIHAQAMKKGFDVSSF-VANTLATMYNKCGKLEYGLTLFEKMSM-- 280
Query: 274 KNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNF 333
+++VSWT+II+ G + AV+ F RM++ + PN TF +V++ C++ +E G
Sbjct: 281 RDVVSWTTIITTLVQMGQEECAVQAFIRMRESDVSPNEYTFAAVISGCANLARIEWGEQL 340
Query: 334 FDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEIT--DVVVWRTLLGACS 391
++ + + ++ M + G+L + I E+T D+V W T++ S
Sbjct: 341 H-ALILHLGLAASLSVENSIMTMYAKCGQLTSSSV----IFHEMTRRDIVSWSTIIAGYS 395
Query: 392 FHGNV 396
G+V
Sbjct: 396 QGGHV 400
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 77/255 (30%), Positives = 123/255 (48%), Gaps = 10/255 (3%)
Query: 135 MPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALF 194
+ + +L N + LVK G L AR +F++M ++ +SWT +I GY N S+EAL LF
Sbjct: 44 ISQTDLPESNKQLKELVKTGHLGNARRMFDKMSQKDEISWTTLISGYVNANDSSEALLLF 103
Query: 195 RKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYA 254
+ M + A N DV +L+HGY K G + V + L+D Y
Sbjct: 104 KNMRVESGLRIDPFILSLAHKACGLNSDVNYGELLHGYAVKTGLVN-SVFVGSALLDMYT 162
Query: 255 KCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTF 314
K G IF ++F ++ + +N+VSWT+II+G G KEA+ F M + ++ + TF
Sbjct: 163 KNGKIFEGRRVFHEMPM--RNVVSWTAIITGLVRAGYNKEALVYFSEMWRSRVEYDSYTF 220
Query: 315 LSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHY--GCLIDMLGRAGRLEQAEKTALG 372
L AC+ G + G + +++ D+ + L M + G+LE L
Sbjct: 221 AIALKACADSGALNYGREIHAQAMKKG---FDVSSFVANTLATMYNKCGKLEYG--LTLF 275
Query: 373 IPSEITDVVVWRTLL 387
+ DVV W T++
Sbjct: 276 EKMSMRDVVSWTTII 290
>gi|356558692|ref|XP_003547637.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g17630-like [Glycine max]
Length = 696
Score = 236 bits (602), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 124/387 (32%), Positives = 216/387 (55%), Gaps = 15/387 (3%)
Query: 78 SFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPE 137
+ ++ CA ++ + G ++H + K G++ +++V AL+ Y + D+ K+F E+
Sbjct: 272 AVVLSVCADMAEVDWGKEIHGYVVKGGYEDYLFVKNALIGTYGKHQHMGDAHKVFLEIKN 331
Query: 138 RNLVTWNVMITGLVKWGELEFARSLFEEMPCR----------NVVSWTGIIDGYTRMNRS 187
+NLV+WN +I+ + G + A + F M NV+SW+ +I G+ R
Sbjct: 332 KNLVSWNALISSYAESGLCDEAYAAFLHMEKSDSDDHSLVRPNVISWSAVISGFAYKGRG 391
Query: 188 NEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLN 247
++L LFR+M + +TI +VL + + + +HGY R + +I V N
Sbjct: 392 EKSLELFRQMQLAKVMANC-VTISSVLSVCAELAALNLGRELHGYA-IRNMMSDNILVGN 449
Query: 248 CLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGL 307
LI+ Y KCG +F++I E ++L+SW S+I G+ MHG+G+ A+ F M + +
Sbjct: 450 GLINMYMKCGDFKEGHLVFDNI--EGRDLISWNSLIGGYGMHGLGENALRTFNEMIRARM 507
Query: 308 KPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAE 367
KP+ +TF+++L+ACSH GLV G N FD+MV E + P+++HY C++D+LGRAG L++A
Sbjct: 508 KPDNITFVAILSACSHAGLVAAGRNLFDQMVTEFRIEPNVEHYACMVDLLGRAGLLKEAT 567
Query: 368 KTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGV 427
+P E + VW LL +C + ++++ E +IL ++ G ++L+ NI A
Sbjct: 568 DIVRNMPIEPNE-YVWGALLNSCRMYKDMDIVEETASQILTLKSKITGSFMLLSNIYAAN 626
Query: 428 GRFGDAERLRRVMDERNAFKVPGCSLV 454
GR+ D+ R+R + K+PG S +
Sbjct: 627 GRWDDSARVRVSARTKGLKKIPGQSWI 653
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 124/459 (27%), Positives = 202/459 (44%), Gaps = 60/459 (13%)
Query: 28 LHHSQLFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATL 87
LHH L+N+++ Q A LY +++++ LP D FT +IR C++L
Sbjct: 94 LHHLLLWNSIIRANVSHGYHQHALELYVEMRKL-----GFLP---DGFTLPLVIRACSSL 145
Query: 88 SHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMI 147
L +H ++GF++H++V LV MY LG ++D+ +LFD M R++V+WN M+
Sbjct: 146 GSSYLCRIVHCHALQMGFRNHLHVVNELVGMYGKLGRMEDARQLFDGMFVRSIVSWNTMV 205
Query: 148 TGLVKWGELEFARSLFEEMPCR----NVVSWTGIIDGYTRMNRSNEALALFRKMVACEYT 203
+G + A +F+ M N V+WT ++ + R +E L LF K++
Sbjct: 206 SGYALNRDSLGASRVFKRMELEGLQPNSVTWTSLLSSHARCGLYDETLELF-KVMRTRGI 264
Query: 204 EPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSAS 263
E + VL +V + IHGY K G+ + + V N LI TY K + A
Sbjct: 265 EIGAEALAVVLSVCADMAEVDWGKEIHGYVVKGGYEDY-LFVKNALIGTYGKHQHMGDAH 323
Query: 264 KLF---------------------------------------EDISVERKNLVSWTSIIS 284
K+F +D S+ R N++SW+++IS
Sbjct: 324 KVFLEIKNKNLVSWNALISSYAESGLCDEAYAAFLHMEKSDSDDHSLVRPNVISWSAVIS 383
Query: 285 GFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVL 344
GFA G G++++E F +MQ + N VT SVL+ C+ + G + +
Sbjct: 384 GFAYKGRGEKSLELFRQMQLAKVMANCVTISSVLSVCAELAALNLGRELHGYAIRNM-MS 442
Query: 345 PDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTR 404
+I LI+M + G ++ I E D++ W +L+G HG +GE R
Sbjct: 443 DNILVGNGLINMYMKCGDFKEGHLVFDNI--EGRDLISWNSLIGGYGMHG---LGENALR 497
Query: 405 KILEMERG-YGGDYVLMYNILAGVGRFGDAERLRRVMDE 442
EM R D + IL+ G R + D+
Sbjct: 498 TFNEMIRARMKPDNITFVAILSACSHAGLVAAGRNLFDQ 536
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 130/288 (45%), Gaps = 43/288 (14%)
Query: 53 LYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVN 112
L+ + Q I+ SH L SF ++F R C TL QLH+ + ++
Sbjct: 12 LFSRFQPIFLISHVHNDELIYSF-HAFFQR-CFTLQQAR---QLHSQLVLTTAHRLPFLA 66
Query: 113 TALVNMYVSLGFLKDSSKLFDEMPERN---LVTWNVMITGLVKWGELEFARSLFEEMPCR 169
L+ +Y FL + K+FD +P + L+ WN +I V G + A L+ EM
Sbjct: 67 ARLIAVYARFAFLSHARKVFDAIPLESLHHLLLWNSIIRANVSHGYHQHALELYVEM--- 123
Query: 170 NVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLI 229
RK+ P T+ V+ A G C+++
Sbjct: 124 -------------------------RKLGFL----PDGFTLPLVIRACSSLGSSYLCRIV 154
Query: 230 HGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMH 289
H + + GF + V+N L+ Y K G + A +LF+ + V +++VSW +++SG+A++
Sbjct: 155 HCHALQMGFRN-HLHVVNELVGMYGKLGRMEDARQLFDGMFV--RSIVSWNTMVSGYALN 211
Query: 290 GMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKM 337
A F RM+ GL+PN VT+ S+L++ + GL +E L F M
Sbjct: 212 RDSLGASRVFKRMELEGLQPNSVTWTSLLSSHARCGLYDETLELFKVM 259
>gi|224104375|ref|XP_002313416.1| predicted protein [Populus trichocarpa]
gi|222849824|gb|EEE87371.1| predicted protein [Populus trichocarpa]
Length = 650
Score = 236 bits (602), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 135/427 (31%), Positives = 238/427 (55%), Gaps = 48/427 (11%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCAT----LS 88
++N L SLA ++ +Y+++ I S D FTY+++++ C +S
Sbjct: 138 VYNALFRALSLAGHGEEVLNMYRRMNSIGIPS--------DRFTYTYVLKACVASECFVS 189
Query: 89 HPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMIT 148
N G ++HA I + G+ +V++ T LV+MY G + ++S
Sbjct: 190 LLNKGREIHAHILRHGYDGYVHIMTTLVDMYAKFGCVSNAS------------------- 230
Query: 149 GLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRK-MVACEYTEPSE 207
+F +MP +NVVSW+ +I Y + ++ EAL LFR+ M+ + P+
Sbjct: 231 ------------CVFNQMPVKNVVSWSAMIACYAKNGKAFEALELFRELMLETQDLCPNS 278
Query: 208 ITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFE 267
+T+++VL A ++ +LIHGY ++G + + V++ L+ YA+CG + ++F+
Sbjct: 279 VTMVSVLQACAALAALEQGRLIHGYILRKGLDSI-LPVISALVTMYARCGKLELGQRVFD 337
Query: 268 DISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLV 327
+ +++++VSW S+IS + +HG GK+A+ F M G++P+ ++F+SVL ACSH GLV
Sbjct: 338 QM--DKRDVVSWNSLISSYGVHGFGKKAIGIFEEMTYNGVEPSPISFVSVLGACSHAGLV 395
Query: 328 EEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLL 387
+EG F+ M + P ++HY C++D+LGRA RLE+A K + E VW +LL
Sbjct: 396 DEGKMLFNSMHVAHGICPSVEHYACMVDLLGRANRLEEAAKIIENMRIE-PGPKVWGSLL 454
Query: 388 GACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFK 447
G+C H NVE+ ER + ++ ++E G+YVL+ +I A G + +R++++++ R K
Sbjct: 455 GSCRIHCNVELAERASIRLFDLEPTNAGNYVLLADIYAEAGMWDGVKRVKKLLEARGLQK 514
Query: 448 VPGCSLV 454
VPG S +
Sbjct: 515 VPGRSWI 521
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 87/340 (25%), Positives = 149/340 (43%), Gaps = 58/340 (17%)
Query: 68 LPPLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKD 127
L P TY LI +C + ++H + + GF ++ T L+NMY + +
Sbjct: 64 LEPNPAQHTYELLILSCTHQNSLLDAQRVHRHLLENGFDQDPFLATKLINMYSFFDSIDN 123
Query: 128 SSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRS 187
+ K+FD+ R + +N + L G E +++ Y RMN
Sbjct: 124 ARKVFDKTRNRTIYVYNALFRALSLAGHGE------------------EVLNMYRRMNSI 165
Query: 188 NEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLN 247
F + SE + ++ G + IH + + G+ + + ++
Sbjct: 166 GIPSDRFTYTYVLKACVASECFV-----SLLNKG-----REIHAHILRHGYDGY-VHIMT 214
Query: 248 CLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGR--MQKV 305
L+D YAK GC+ +AS +F + V KN+VSW+++I+ +A +G EA+E F ++
Sbjct: 215 TLVDMYAKFGCVSNASCVFNQMPV--KNVVSWSAMIACYAKNGKAFEALELFRELMLETQ 272
Query: 306 GLKPNRVTFLSVLNACS-----------HGGLVEEGLNFFDKMVEECEVLPDIKHYGCLI 354
L PN VT +SVL AC+ HG ++ +GL+ +LP I L+
Sbjct: 273 DLCPNSVTMVSVLQACAALAALEQGRLIHGYILRKGLD---------SILPVI---SALV 320
Query: 355 DMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHG 394
M R G+LE ++ + DVV W +L+ + HG
Sbjct: 321 TMYARCGKLELGQRVFDQMDKR--DVVSWNSLISSYGVHG 358
>gi|15222513|ref|NP_174474.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169173|sp|Q9C6T2.1|PPR68_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g31920
gi|12321292|gb|AAG50713.1|AC079041_6 PPR-repeat protein, putative [Arabidopsis thaliana]
gi|332193295|gb|AEE31416.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 606
Score = 236 bits (602), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 136/421 (32%), Positives = 224/421 (53%), Gaps = 43/421 (10%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
FNT++ Y S ++A Y ++ Q + P D+FTY L++ C L G
Sbjct: 100 FNTMIRGYVNVMSFEEALCFYNEMMQ---RGNEP-----DNFTYPCLLKACTRLKSIREG 151
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
Q+H + K+G ++ V+V +L+NMY +
Sbjct: 152 KQIHGQVFKLGLEADVFVQNSLINMYG-------------------------------RC 180
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
GE+E + ++FE++ + SW+ ++ M +E L LFR M + + E +++
Sbjct: 181 GEMELSSAVFEKLESKTAASWSSMVSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSA 240
Query: 214 LPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVER 273
L A G + IHG+ R + +I V L+D Y KCGC+ A +F+ + E+
Sbjct: 241 LLACANTGALNLGMSIHGF-LLRNISELNIIVQTSLVDMYVKCGCLDKALHIFQKM--EK 297
Query: 274 KNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNF 333
+N ++++++ISG A+HG G+ A+ F +M K GL+P+ V ++SVLNACSH GLV+EG
Sbjct: 298 RNNLTYSAMISGLALHGEGESALRMFSKMIKEGLEPDHVVYVSVLNACSHSGLVKEGRRV 357
Query: 334 FDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFH 393
F +M++E +V P +HYGCL+D+LGRAG LE+A +T IP E D V+WRT L C
Sbjct: 358 FAEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEALETIQSIPIEKND-VIWRTFLSQCRVR 416
Query: 394 GNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSL 453
N+E+G+ +++L++ GDY+L+ N+ + + D R R + + + PG S+
Sbjct: 417 QNIELGQIAAQELLKLSSHNPGDYLLISNLYSQGQMWDDVARTRTEIAIKGLKQTPGFSI 476
Query: 454 V 454
V
Sbjct: 477 V 477
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 134/293 (45%), Gaps = 20/293 (6%)
Query: 156 LEFARSLFE--EMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
+ +A S+F + PC + +I GY + EAL + +M+ EP T +
Sbjct: 82 MNYAASIFRGIDDPC--TFDFNTMIRGYVNVMSFEEALCFYNEMMQ-RGNEPDNFTYPCL 138
Query: 214 LPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVER 273
L A + ++ + IHG K G A D+ V N LI+ Y +CG + +S +FE + E
Sbjct: 139 LKACTRLKSIREGKQIHGQVFKLGLEA-DVFVQNSLINMYGRCGEMELSSAVFEKL--ES 195
Query: 274 KNLVSWTSIISGFAMHGMGKEAVENF-GRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLN 332
K SW+S++S A GM E + F G + LK +S L AC++ G + G++
Sbjct: 196 KTAASWSSMVSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMS 255
Query: 333 ---FFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGA 389
F + + E ++ L+DM + G L++A + E + + + ++
Sbjct: 256 IHGFLLRNISELNIIVQTS----LVDMYVKCGCLDKA--LHIFQKMEKRNNLTYSAMISG 309
Query: 390 CSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDE 442
+ HG E R+ K++ + G D+V+ ++L G + RRV E
Sbjct: 310 LALHGEGESALRMFSKMI--KEGLEPDHVVYVSVLNACSHSGLVKEGRRVFAE 360
>gi|225447243|ref|XP_002272819.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g03540-like [Vitis vinifera]
Length = 633
Score = 236 bits (602), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 143/431 (33%), Positives = 226/431 (52%), Gaps = 52/431 (12%)
Query: 32 QLFNTLLH-----FYSLAESPQKAFLLYKQLQQIYT--HSHSPLPPLFDSFTYSFLIRTC 84
QLF+ LL + S+ + + + L+ Y+ H P D FT+ ++ C
Sbjct: 217 QLFDELLEPDAICWTSIISALTRNDFFDEALRFFYSMQRDHGMCP---DGFTFGTVLTAC 273
Query: 85 ATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWN 144
L G ++HA + GF +V V ++LV+MY G + +S ++FD
Sbjct: 274 GNLGRLKQGKEVHAKVITTGFCGNVVVESSLVDMYGKCGSVGESQRIFDR---------- 323
Query: 145 VMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACE-YT 203
MP +N VSW+ ++ GY + + +FRKM + Y
Sbjct: 324 ---------------------MPIKNSVSWSALLGGYCQNGDFKSVIQIFRKMEKVDLYC 362
Query: 204 EPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSAS 263
+ + A L A+ Q +V CQ I G + D+ V + L+D YAKCGCI A
Sbjct: 363 FGTILRTCAGLAAVRQGKEVH-CQYIRKGGWR------DVIVESALVDLYAKCGCIEYAQ 415
Query: 264 KLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSH 323
+F+ + V +NL++W S+I GFA +G G+EA+ F +M K G+KP+ ++F+ +L ACSH
Sbjct: 416 TIFDQMPV--RNLITWNSMIGGFAQNGRGEEALRIFNQMVKEGIKPDYISFIGILFACSH 473
Query: 324 GGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVW 383
GLV+EG +F M ++ + I+HY C++D+LGRAG LE+AE + D +W
Sbjct: 474 RGLVDEGREYFISMTKDYGIKVGIEHYSCMVDLLGRAGLLEEAE-ILIETSDFRDDSSLW 532
Query: 384 RTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDER 443
LLGAC+ N E+ ER+ ++++E+E Y YVL+ N+ VGR+ DA R+RR+M +R
Sbjct: 533 AALLGACTTCTNYEIAERIAKRVMELEPDYHLSYVLLANVYKAVGRWNDALRIRRLMKDR 592
Query: 444 NAFKVPGCSLV 454
K+PG S +
Sbjct: 593 GVNKMPGKSWI 603
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 91/335 (27%), Positives = 166/335 (49%), Gaps = 38/335 (11%)
Query: 77 YSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMP 136
Y+ L++TC + N G Q+HA + K G + +V +L+ +Y LG + P
Sbjct: 62 YASLLQTCTKVLAFNHGLQIHAHVIKSGLEFDRFVGNSLLTLYFKLG---------TDFP 112
Query: 137 ERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRK 196
E R +F+ + ++V+SWT +I GY R+ + +L LF K
Sbjct: 113 E---------------------TRKVFDGLFVKDVISWTSMISGYVRVGKPMNSLELFWK 151
Query: 197 MVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKC 256
M+A EP+ T+ AV+ A + GD+K ++ HG RGF + + + + LID + +
Sbjct: 152 MLAYG-VEPNAFTLSAVIKACSELGDLKLGRIFHGVVLGRGFDS-NYVIASALIDMHGRN 209
Query: 257 GCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKV-GLKPNRVTFL 315
+ A +LF+++ + + WTSIIS + EA+ F MQ+ G+ P+ TF
Sbjct: 210 CALDDARQLFDELL--EPDAICWTSIISALTRNDFFDEALRFFYSMQRDHGMCPDGFTFG 267
Query: 316 SVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPS 375
+VL AC + G +++G K++ ++ L+DM G+ G + ++++ +P
Sbjct: 268 TVLTACGNLGRLKQGKEVHAKVITT-GFCGNVVVESSLVDMYGKCGSVGESQRIFDRMP- 325
Query: 376 EITDVVVWRTLLGACSFHGNVEMGERVTRKILEME 410
I + V W LLG +G+ + ++ RK+ +++
Sbjct: 326 -IKNSVSWSALLGGYCQNGDFKSVIQIFRKMEKVD 359
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 111/252 (44%), Gaps = 49/252 (19%)
Query: 229 IHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSAS-KLFEDISVERKNLVSWTSIISGFA 287
IH + K G FD V N L+ Y K G F + K+F+ + V K+++SWTS+ISG+
Sbjct: 81 IHAHVIKSGLE-FDRFVGNSLLTLYFKLGTDFPETRKVFDGLFV--KDVISWTSMISGYV 137
Query: 288 MHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACS-----------HGGLVEEGLN---- 332
G ++E F +M G++PN T +V+ ACS HG ++ G +
Sbjct: 138 RVGKPMNSLELFWKMLAYGVEPNAFTLSAVIKACSELGDLKLGRIFHGVVLGRGFDSNYV 197
Query: 333 --------------------FFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALG 372
FD+++E PD + +I L R ++A +
Sbjct: 198 IASALIDMHGRNCALDDARQLFDELLE-----PDAICWTSIISALTRNDFFDEALRFFYS 252
Query: 373 IPSE---ITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGR 429
+ + D + T+L AC G ++ G+ V K++ G+ G+ V+ +++ G+
Sbjct: 253 MQRDHGMCPDGFTFGTVLTACGNLGRLKQGKEVHAKVITT--GFCGNVVVESSLVDMYGK 310
Query: 430 FGDAERLRRVMD 441
G +R+ D
Sbjct: 311 CGSVGESQRIFD 322
>gi|345505204|gb|AEN99826.1| chlororespiratory reduction 4, partial [Aethionema cordifolium]
Length = 587
Score = 236 bits (602), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 126/343 (36%), Positives = 205/343 (59%), Gaps = 6/343 (1%)
Query: 113 TALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVV 172
+L++ YV G ++D+ LF MP R++VTW MI G K G + A++LF++MP R+VV
Sbjct: 234 NSLIDGYVKHGRMEDAKDLFYVMPRRDVVTWATMIDGYAKLGFVHKAKTLFDQMPHRDVV 293
Query: 173 SWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGY 232
++ ++ GY + EAL +F M + P E T++ VL AI Q G + ++ Y
Sbjct: 294 AYNSMMAGYVQNKYHMEALEIFNNMEKDSHLSPDETTLVIVLSAIAQLGRLSKAMSMNKY 353
Query: 233 GEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMG 292
++ F ++ LID ++KCG I A +FE I + K++ W ++I G A+HG G
Sbjct: 354 IVEKSF-PLGGKLGVALIDMHSKCGSIQQAISVFEGI--KNKSIDHWNAMIGGLAIHGHG 410
Query: 293 KEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGC 352
+ A + ++++ +KP+ +TF+ VLNACSH GLV+EGL F+ M + ++ P ++HYGC
Sbjct: 411 ELAFDMLMQIERCSIKPDDITFIGVLNACSHSGLVKEGLLSFELMRRKHKIEPRLQHYGC 470
Query: 353 LIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERG 412
++D+L R+G +E A+ +P E D V+WRT L AC E+GE V + ++ ++ G
Sbjct: 471 IVDILSRSGSIELAKHLIEDMPMEPND-VIWRTFLIACRNRKEFEIGELVAKHLI-LQAG 528
Query: 413 YG-GDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
Y YVL+ N+ A +G + D R+R +M +R K+PGCS +
Sbjct: 529 YNPSSYVLLSNMYASLGMWKDVRRVRMMMKQRKLHKIPGCSWI 571
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 95/342 (27%), Positives = 179/342 (52%), Gaps = 20/342 (5%)
Query: 73 DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLF 132
D F+ S +++ C+ L G Q+H + K G S +++ L+ +Y+ G L + ++F
Sbjct: 98 DKFSLSLVLKACSRLGFVQEGMQIHGFLRKTGIWSDLFLQNCLIGLYLKCGCLGFARQIF 157
Query: 133 DEMPERNLVTWNVMITGLVKWGELEFARSLFEEMP--CRNVVSWTGIIDGYTRMNRSNEA 190
D MP+R+ V++N MI G VK G + AR LF+ MP +N++SW +I GY ++++
Sbjct: 158 DRMPQRDSVSYNSMIDGYVKCGLIGSARELFDLMPKEMKNLISWNSMISGYA---QTSDG 214
Query: 191 LALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLI 250
+ + K+ A E E I+ +++ ++G ++ + + +R D+ +I
Sbjct: 215 VNIASKLFA-EMPEKDLISWNSLIDGYVKHGRMEDAKDLFYVMPRR-----DVVTWATMI 268
Query: 251 DTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVG-LKP 309
D YAK G + A LF+ + +++V++ S+++G+ + EA+E F M+K L P
Sbjct: 269 DGYAKLGFVHKAKTLFDQMP--HRDVVAYNSMMAGYVQNKYHMEALEIFNNMEKDSHLSP 326
Query: 310 NRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKT 369
+ T + VL+A + G + + ++ +VE+ L K LIDM + G ++QA
Sbjct: 327 DETTLVIVLSAIAQLGRLSKAMSMNKYIVEKSFPLGG-KLGVALIDMHSKCGSIQQAISV 385
Query: 370 ALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMER 411
GI ++ D W ++G + HG+ GE ++++ER
Sbjct: 386 FEGIKNKSID--HWNAMIGGLAIHGH---GELAFDMLMQIER 422
>gi|222631044|gb|EEE63176.1| hypothetical protein OsJ_17985 [Oryza sativa Japonica Group]
Length = 745
Score = 236 bits (602), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 127/322 (39%), Positives = 193/322 (59%), Gaps = 7/322 (2%)
Query: 137 ERNLVTWNVMITGLVKWGELEFARSLFEEMPC--RNVVSWTGIIDGYTRMNRSNEALALF 194
+ +L+ +N +I K + ARS+F+++P RNVV+WT +I G+ + SN+AL LF
Sbjct: 298 DEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLF 357
Query: 195 RKMVACEY-TEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKR-GFTAFDIRVLNCLIDT 252
+M++ Y P+ TI +L A ++ + IH Y + + + V NCLI+
Sbjct: 358 VEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVANCLINM 417
Query: 253 YAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRV 312
Y+KCG + +A +F+ +S +K+ +SWTS+++G+ MHG G EA++ F +M+K G P+ +
Sbjct: 418 YSKCGDVDTARHVFDSMS--QKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDI 475
Query: 313 TFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALG 372
TFL VL ACSH G+V++GL++FD M + + P +HY ID+L R GRL++A KT
Sbjct: 476 TFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYAYAIDLLARFGRLDKAWKTVKD 535
Query: 373 IPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGD 432
+P E T VVW LL AC H NVE+ E K++EM G Y L+ NI A GR+ D
Sbjct: 536 MPMEPT-AVVWVALLSACRVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATAGRWKD 594
Query: 433 AERLRRVMDERNAFKVPGCSLV 454
R+R +M + K PGCS V
Sbjct: 595 VARIRHLMKKSGIKKRPGCSWV 616
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 94/333 (28%), Positives = 163/333 (48%), Gaps = 23/333 (6%)
Query: 80 LIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERN 139
++ C +L ++H + G V+V AL++ Y G ++++ K+F+ M ++
Sbjct: 126 ILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNMMEFKD 185
Query: 140 LVTWNVMITGLVKWGELEFARSLFEEMPCRNV----VSWTGIIDGYTRMNRSNEALALFR 195
+V+WN M+ G + G + A LF+ M N+ V+WT +I GY++ S+EAL +FR
Sbjct: 186 VVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEALNVFR 245
Query: 196 KMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKR---------GFTAFDIRVL 246
+M+ + P+ +TI++VL A G IH Y K G D+ V
Sbjct: 246 QMIF-SGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDEDLMVY 304
Query: 247 NCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRM--QK 304
N LID Y+KC +A +F+DI +E +N+V+WT +I G A +G +A++ F M +
Sbjct: 305 NALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEP 364
Query: 305 VGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHY---GCLIDMLGRAG 361
G+ PN T +L AC+H + G ++ + D Y CLI+M + G
Sbjct: 365 YGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHQY--DSSAYFVANCLINMYSKCG 422
Query: 362 RLEQAEKTALGIPSEITDVVVWRTLLGACSFHG 394
++ A + + + W +++ HG
Sbjct: 423 DVDTARHVFDSMSQK--SAISWTSMMTGYGMHG 453
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 101/374 (27%), Positives = 166/374 (44%), Gaps = 82/374 (21%)
Query: 72 FDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKL 131
D FT +++ C L G+ H +I GF+S+V++ ALV MY G L+++S +
Sbjct: 8 LDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMI 67
Query: 132 FDEMPER---NLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSN 188
FDE+ +R ++++WN +++ VK +WT
Sbjct: 68 FDEITQRGIDDVISWNSIVSAHVKSSN-----------------AWT------------- 97
Query: 189 EALALFRKMVACEYTEPSE-----ITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDI 243
AL LF KM + +P+ I+I+ +LPA V + +HG + G T D+
Sbjct: 98 -ALDLFSKMTLIVHEKPTNERSDIISIVNILPACGSLKAVPQTKEVHGNAIRNG-TFLDV 155
Query: 244 RVLNCLIDTYAKCGCIFSASKLFEDISVE----------------------------RK- 274
V N LID YAKCG + +A K+F + + RK
Sbjct: 156 FVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKE 215
Query: 275 ----NLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEG 330
++V+WT++I+G++ G EA+ F +M G PN VT +SVL+AC+ G +G
Sbjct: 216 NIPLDMVTWTAVIAGYSQRGCSHEALNVFRQMIFSGSLPNCVTIISVLSACASLGAFSQG 275
Query: 331 LNFFDKMVEECEVL---------PDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVV 381
+ ++ C + D+ Y LIDM + + A IP E +VV
Sbjct: 276 MEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVV 335
Query: 382 VWRTLLGACSFHGN 395
W ++G + +G+
Sbjct: 336 TWTVMIGGHAQYGD 349
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 94/226 (41%), Gaps = 49/226 (21%)
Query: 73 DSFTYSFLIRTCATLSHPNLGTQLHA-VISKVGFQSHVY-VNTALVNMYVSLGFLKDSSK 130
+++T S ++ CA L+ +G Q+HA V+ + S Y V L+NMY G + +
Sbjct: 370 NAYTISCILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVANCLINMYSKCGDVDTARH 429
Query: 131 LFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEA 190
+FD M +++ ++W M+T GY R +EA
Sbjct: 430 VFDSMSQKSAISWTSMMT-------------------------------GYGMHGRGSEA 458
Query: 191 LALFRKMVACEYTEPSEITILAVLPAIWQNGDV-------KSCQLIHGYGEKRGFTAFDI 243
L +F KM + P +IT L VL A G V S +G + A+
Sbjct: 459 LDIFDKMRKAGFV-PDDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYAY-- 515
Query: 244 RVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMH 289
ID A+ G + A K +D+ +E +V W +++S +H
Sbjct: 516 -----AIDLLARFGRLDKAWKTVKDMPMEPTAVV-WVALLSACRVH 555
>gi|242045336|ref|XP_002460539.1| hypothetical protein SORBIDRAFT_02g030160 [Sorghum bicolor]
gi|241923916|gb|EER97060.1| hypothetical protein SORBIDRAFT_02g030160 [Sorghum bicolor]
Length = 630
Score = 236 bits (601), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 134/426 (31%), Positives = 230/426 (53%), Gaps = 18/426 (4%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+NTLL YS + + LL+ +++ D T L+ C L++P+ G
Sbjct: 173 WNTLLMGYSRSGNANHCLLLFNKMRMAGLTC--------DDATLCILVDACTELANPSAG 224
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
+ +H ++ + G+ + V+ +L+++Y L D+ ++F+ M + +V+WN +I +K
Sbjct: 225 SAIHKIVVQSGWNAMAEVSNSLISLYTKFSLLDDAVRIFESMEVQTIVSWNSLIDAYMKL 284
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
G +E A SLF +P NV+SWT +I G R ++EAL LF +M+A E+ P + T AV
Sbjct: 285 GCVEKATSLFGSVPETNVISWTAMIGGLARNGLADEALILFVEMLAHEHIHPDDFTFGAV 344
Query: 214 LPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVER 273
L A + S +++H + GF ++ + V N LID YAKCG + + +F ++
Sbjct: 345 LHACATAASLASGRMVHCRVFQSGFVSY-LYVANSLIDMYAKCGDLEGGTNVFS--TIVN 401
Query: 274 KNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNF 333
K+LVSW +++ GFA++G+ EA+ + M+ + P+ VTF +L ACSH GL+E G F
Sbjct: 402 KDLVSWNTMLFGFAINGLPNEALVVYDSMKSHDVCPDEVTFTGLLTACSHSGLLEHGKTF 461
Query: 334 FDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQA----EKTALGIPSEITDVVVWRTLLGA 389
F+ MV + P +H C++DM R+G + +A ++ + I + +D+ LL A
Sbjct: 462 FELMVSVHGIQPKPEHLSCILDMYARSGNITKAMEMLDRYSEMIQTHNSDIR--EALLSA 519
Query: 390 CSF-HGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKV 448
CS H N + + + ++ + YV++ N+ G++ AER+R M E K
Sbjct: 520 CSLEHLNFSVARKAVKDMVATKSAGDVGYVMLSNLFCATGQWNQAERVRIAMAEYGIKKS 579
Query: 449 PGCSLV 454
PGCS +
Sbjct: 580 PGCSWI 585
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 119/396 (30%), Positives = 187/396 (47%), Gaps = 57/396 (14%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+N +L Y+ A P+ A L+ S +P P D+F+ + + A L P G
Sbjct: 45 WNAMLTAYARAGQPRDALALF---------SRAPAP---DAFSLTAALSAAAALRSPTAG 92
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
QLHA + +VG ++ + V +L++MY +D+++ F EM ERN ++W ++ V
Sbjct: 93 AQLHARLLRVGLRALLPVGNSLISMYAKCARAEDAARAFGEMRERNALSWCSLLDAYVAS 152
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMV--------------- 198
+L A+ LF+EMP RN V+W ++ GY+R +N L LF KM
Sbjct: 153 DDLRLAQELFDEMPNRNNVAWNTLLMGYSRSGNANHCLLLFNKMRMAGLTCDDATLCILV 212
Query: 199 -AC-EYTEPSEITIL--AVLPAIWQNGDVKSCQLIHGYGE-------KRGFTAFDIRVL- 246
AC E PS + + V+ + W S LI Y + R F + +++ +
Sbjct: 213 DACTELANPSAGSAIHKIVVQSGWNAMAEVSNSLISLYTKFSLLDDAVRIFESMEVQTIV 272
Query: 247 --NCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRM-Q 303
N LID Y K GC+ A+ LF SV N++SWT++I G A +G+ EA+ F M
Sbjct: 273 SWNSLIDAYMKLGCVEKATSLFG--SVPETNVISWTAMIGGLARNGLADEALILFVEMLA 330
Query: 304 KVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPD-----IKHYGCLIDMLG 358
+ P+ TF +VL+AC+ + G +MV C V + LIDM
Sbjct: 331 HEHIHPDDFTFGAVLHACATAASLASG-----RMV-HCRVFQSGFVSYLYVANSLIDMYA 384
Query: 359 RAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHG 394
+ G LE I ++ D+V W T+L + +G
Sbjct: 385 KCGDLEGGTNVFSTIVNK--DLVSWNTMLFGFAING 418
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 72/318 (22%), Positives = 125/318 (39%), Gaps = 67/318 (21%)
Query: 136 PERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFR 195
P LV I L + G+ AR++F+ MP R+ V+W ++ Y R + +ALALF
Sbjct: 7 PFAGLVAATSRIASLGRAGDAASARAVFDAMPRRDAVAWNAMLTAYARAGQPRDALALFS 66
Query: 196 KMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAK 255
+ A P ++ A L A + +H + G A + V N LI YAK
Sbjct: 67 RAPA-----PDAFSLTAALSAAAALRSPTAGAQLHARLLRVGLRAL-LPVGNSLISMYAK 120
Query: 256 CGCIFSASKLF---------------------EDISVER--------KNLVSWTSIISGF 286
C A++ F +D+ + + +N V+W +++ G+
Sbjct: 121 CARAEDAARAFGEMRERNALSWCSLLDAYVASDDLRLAQELFDEMPNRNNVAWNTLLMGY 180
Query: 287 AMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACS-----------HGGLVEEGLN--- 332
+ G + F +M+ GL + T +++AC+ H +V+ G N
Sbjct: 181 SRSGNANHCLLLFNKMRMAGLTCDDATLCILVDACTELANPSAGSAIHKIVVQSGWNAMA 240
Query: 333 --------------FFDKMVE--ECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSE 376
D V E + I + LID + G +E+A +P
Sbjct: 241 EVSNSLISLYTKFSLLDDAVRIFESMEVQTIVSWNSLIDAYMKLGCVEKATSLFGSVPE- 299
Query: 377 ITDVVVWRTLLGACSFHG 394
T+V+ W ++G + +G
Sbjct: 300 -TNVISWTAMIGGLARNG 316
>gi|296083884|emb|CBI24272.3| unnamed protein product [Vitis vinifera]
Length = 729
Score = 236 bits (601), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 137/395 (34%), Positives = 219/395 (55%), Gaps = 18/395 (4%)
Query: 73 DSFTYSFLIRTCATLSHPNLGTQLHAVISKVG-FQSHVYVNTALVNMYVSLGFLKDSSKL 131
+S T + + C LS G ++H KV S + V +LV+ Y ++ + +
Sbjct: 211 NSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRK 270
Query: 132 FDEMPERNLVTWNVM--ITGLVKWGE----LEF------ARSLFEEMPCRNVVSWTGIID 179
F + + +LV+WN M +TG ++G+ LEF A S+F E+ R+VV W II
Sbjct: 271 FGMIKQTDLVSWNAMLAVTGFTQYGDGKAALEFFQRMHIACSVFSELSTRDVVVWNSIIS 330
Query: 180 GYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFT 239
+ RS AL L R+M E + +T+++ LPA + ++ + IH + + G
Sbjct: 331 ACAQSGRSVNALDLLREM-NLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRCGLD 389
Query: 240 AFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENF 299
+ +LN LID Y +CG I + ++F+ + +++LVSW +IS + MHG G +AV F
Sbjct: 390 TCNF-ILNSLIDMYGRCGSIQKSRRIFD--LMPQRDLVSWNVMISVYGMHGFGMDAVNLF 446
Query: 300 GRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGR 359
+ + +GLKPN +TF ++L+ACSH GL+EEG +F M E + P ++ Y C++D+L R
Sbjct: 447 QQFRTMGLKPNHITFTNLLSACSHSGLIEEGWKYFKMMKTEYAMDPAVEQYACMVDLLSR 506
Query: 360 AGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVL 419
AG+ + + +P E + VW +LLGAC H N ++ E R + E+E G+YVL
Sbjct: 507 AGQFNETLEFIEKMPFE-PNAAVWGSLLGACRIHCNPDLAEYAARYLFELEPQSSGNYVL 565
Query: 420 MYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
M NI + GR+ DA ++R +M ER K PGCS +
Sbjct: 566 MANIYSAAGRWEDAAKIRCLMKERGVTKPPGCSWI 600
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 86/364 (23%), Positives = 154/364 (42%), Gaps = 78/364 (21%)
Query: 73 DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLF 132
D F + + + C+ L + +G ++ + +GF+ + V ++++M++
Sbjct: 110 DHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFI------------ 157
Query: 133 DEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALA 192
K G ++ AR FEE+ ++V W ++ GYT +AL
Sbjct: 158 -------------------KCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALN 198
Query: 193 LFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDT 252
+FRKMV E +P+ ITI + + A ++ + IHGY K D+ V N L+D
Sbjct: 199 VFRKMVL-EGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDY 257
Query: 253 YAKCGCIFSASKLFEDISVERKNLVSWTSI--ISGFAMHGMGKEAVENFGRMQKVG---- 306
YAKC + A + F +++ +LVSW ++ ++GF +G GK A+E F RM
Sbjct: 258 YAKCRSVEVARRKFG--MIKQTDLVSWNAMLAVTGFTQYGDGKAALEFFQRMHIACSVFS 315
Query: 307 --LKPNRVTFLSVLNACSHGGLVEEGLNFFDKM---------------VEECEVLPDIKH 349
+ V + S+++AC+ G L+ +M + C L ++
Sbjct: 316 ELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQ 375
Query: 350 -------------------YGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGAC 390
LIDM GR G ++++ + +P D+V W ++
Sbjct: 376 GKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQR--DLVSWNVMISVY 433
Query: 391 SFHG 394
HG
Sbjct: 434 GMHG 437
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 79/316 (25%), Positives = 140/316 (44%), Gaps = 37/316 (11%)
Query: 77 YSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMP 136
Y+ +++ C L + LG Q+HA + G ++ + L+ +Y G ++D
Sbjct: 13 YASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVED--------- 63
Query: 137 ERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRK 196
AR +F++M RNV SWT I++ Y + E + LF
Sbjct: 64 ----------------------ARRMFDKMSERNVFSWTAIMEMYCGLGDYEETIKLFYL 101
Query: 197 MVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKC 256
MV E P V A + + + + ++ Y GF + V ++D + KC
Sbjct: 102 MVN-EGVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEG-NSCVKGSILDMFIKC 159
Query: 257 GCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLS 316
G + A + FE+I E K++ W ++SG+ G K+A+ F +M G+KPN +T S
Sbjct: 160 GRMDIARRFFEEI--EFKDVFMWNIMVSGYTSKGEFKKALNVFRKMVLEGVKPNSITIAS 217
Query: 317 VLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSE 376
++AC++ L+ G ++ E+ D+ L+D + +E A + G+ +
Sbjct: 218 AVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRK-FGMIKQ 276
Query: 377 ITDVVVWRTLLGACSF 392
TD+V W +L F
Sbjct: 277 -TDLVSWNAMLAVTGF 291
>gi|147771902|emb|CAN75707.1| hypothetical protein VITISV_031420 [Vitis vinifera]
Length = 708
Score = 236 bits (601), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 143/431 (33%), Positives = 226/431 (52%), Gaps = 52/431 (12%)
Query: 32 QLFNTLLH-----FYSLAESPQKAFLLYKQLQQIYT--HSHSPLPPLFDSFTYSFLIRTC 84
QLF+ LL + S+ + + + L+ Y+ H P D FT+ ++ C
Sbjct: 276 QLFDELLEPDAICWTSIISALTRNDFFDEALRFFYSMQRDHGMCP---DGFTFGTVLTAC 332
Query: 85 ATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWN 144
L G ++HA + GF +V V ++LV+MY G + +S ++FD
Sbjct: 333 GNLGRLKQGKEVHAKVITTGFCGNVVVESSLVDMYGKCGSVGESQRIFDR---------- 382
Query: 145 VMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACE-YT 203
MP +N VSW+ ++ GY + + +FRKM + Y
Sbjct: 383 ---------------------MPIKNSVSWSALLGGYCQNGDFKSVIQIFRKMEKVDLYC 421
Query: 204 EPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSAS 263
+ + A L A+ Q +V CQ I G + D+ V + L+D YAKCGCI A
Sbjct: 422 FGTILRTCAGLAAVRQGKEVH-CQYIRKGGWR------DVIVESALVDLYAKCGCIEYAQ 474
Query: 264 KLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSH 323
+F+ + V +NL++W S+I GFA +G G+EA+ F +M K G+KP+ ++F+ +L ACSH
Sbjct: 475 TIFDQMPV--RNLITWNSMIGGFAQNGRGEEALRIFNQMVKEGIKPDYISFIGILFACSH 532
Query: 324 GGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVW 383
GLV+EG +F M ++ + I+HY C++D+LGRAG LE+AE + D +W
Sbjct: 533 RGLVDEGREYFISMTKDYGIKVGIEHYSCMVDLLGRAGLLEEAE-ILIETSDFRDDSSLW 591
Query: 384 RTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDER 443
LLGAC+ N E+ ER+ ++++E+E Y YVL+ N+ VGR+ DA R+RR+M +R
Sbjct: 592 AALLGACTTCTNYEIAERIAKRVMELEPDYHLSYVLLANVYKAVGRWNDALRIRRLMKDR 651
Query: 444 NAFKVPGCSLV 454
K+PG S +
Sbjct: 652 GVNKMPGKSWI 662
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 91/335 (27%), Positives = 166/335 (49%), Gaps = 38/335 (11%)
Query: 77 YSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMP 136
Y+ L++TC + N G Q+HA + K G + +V +L+ +Y LG + P
Sbjct: 121 YASLLQTCTKVLAFNHGLQIHAHVIKSGLEFDRFVGNSLLTLYFKLG---------TDFP 171
Query: 137 ERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRK 196
E R +F+ + ++V+SWT +I GY R+ + +L LF K
Sbjct: 172 E---------------------TRKVFDGLFVKDVISWTSMISGYVRVGKPMNSLELFWK 210
Query: 197 MVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKC 256
M+A EP+ T+ AV+ A + GD+K ++ HG RGF + + + + LID + +
Sbjct: 211 MLAYG-VEPNAFTLSAVIKACSELGDLKLGRIFHGVVLGRGFDS-NYVIASALIDMHGRN 268
Query: 257 GCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKV-GLKPNRVTFL 315
+ A +LF+++ + + WTSIIS + EA+ F MQ+ G+ P+ TF
Sbjct: 269 CALDDARQLFDELL--EPDAICWTSIISALTRNDFFDEALRFFYSMQRDHGMCPDGFTFG 326
Query: 316 SVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPS 375
+VL AC + G +++G K++ ++ L+DM G+ G + ++++ +P
Sbjct: 327 TVLTACGNLGRLKQGKEVHAKVITT-GFCGNVVVESSLVDMYGKCGSVGESQRIFDRMP- 384
Query: 376 EITDVVVWRTLLGACSFHGNVEMGERVTRKILEME 410
I + V W LLG +G+ + ++ RK+ +++
Sbjct: 385 -IKNSVSWSALLGGYCQNGDFKSVIQIFRKMEKVD 418
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 111/253 (43%), Gaps = 49/253 (19%)
Query: 229 IHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSAS-KLFEDISVERKNLVSWTSIISGFA 287
IH + K G FD V N L+ Y K G F + K+F+ + V K+++SWTS+ISG+
Sbjct: 140 IHAHVIKSGLE-FDRFVGNSLLTLYFKLGTDFPETRKVFDGLFV--KDVISWTSMISGYV 196
Query: 288 MHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACS-----------HGGLVEEGLN---- 332
G ++E F +M G++PN T +V+ ACS HG ++ G +
Sbjct: 197 RVGKPMNSLELFWKMLAYGVEPNAFTLSAVIKACSELGDLKLGRIFHGVVLGRGFDSNYV 256
Query: 333 --------------------FFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALG 372
FD+++E PD + +I L R ++A +
Sbjct: 257 IASALIDMHGRNCALDDARQLFDELLE-----PDAICWTSIISALTRNDFFDEALRFFYS 311
Query: 373 IPSE---ITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGR 429
+ + D + T+L AC G ++ G+ V K++ G+ G+ V+ +++ G+
Sbjct: 312 MQRDHGMCPDGFTFGTVLTACGNLGRLKQGKEVHAKVITT--GFCGNVVVESSLVDMYGK 369
Query: 430 FGDAERLRRVMDE 442
G +R+ D
Sbjct: 370 CGSVGESQRIFDR 382
>gi|115463097|ref|NP_001055148.1| Os05g0305300 [Oryza sativa Japonica Group]
gi|113578699|dbj|BAF17062.1| Os05g0305300 [Oryza sativa Japonica Group]
Length = 852
Score = 236 bits (601), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 127/322 (39%), Positives = 193/322 (59%), Gaps = 7/322 (2%)
Query: 137 ERNLVTWNVMITGLVKWGELEFARSLFEEMPC--RNVVSWTGIIDGYTRMNRSNEALALF 194
+ +L+ +N +I K + ARS+F+++P RNVV+WT +I G+ + SN+AL LF
Sbjct: 405 DEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLF 464
Query: 195 RKMVACEY-TEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKR-GFTAFDIRVLNCLIDT 252
+M++ Y P+ TI +L A ++ + IH Y + + + V NCLI+
Sbjct: 465 VEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVANCLINM 524
Query: 253 YAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRV 312
Y+KCG + +A +F+ +S +K+ +SWTS+++G+ MHG G EA++ F +M+K G P+ +
Sbjct: 525 YSKCGDVDTARHVFDSMS--QKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDI 582
Query: 313 TFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALG 372
TFL VL ACSH G+V++GL++FD M + + P +HY ID+L R GRL++A KT
Sbjct: 583 TFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYAYAIDLLARFGRLDKAWKTVKD 642
Query: 373 IPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGD 432
+P E T VVW LL AC H NVE+ E K++EM G Y L+ NI A GR+ D
Sbjct: 643 MPMEPT-AVVWVALLSACRVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATAGRWKD 701
Query: 433 AERLRRVMDERNAFKVPGCSLV 454
R+R +M + K PGCS V
Sbjct: 702 VARIRHLMKKSGIKKRPGCSWV 723
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 94/333 (28%), Positives = 163/333 (48%), Gaps = 23/333 (6%)
Query: 80 LIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERN 139
++ C +L ++H + G V+V AL++ Y G ++++ K+F+ M ++
Sbjct: 233 ILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNMMEFKD 292
Query: 140 LVTWNVMITGLVKWGELEFARSLFEEMPCRNV----VSWTGIIDGYTRMNRSNEALALFR 195
+V+WN M+ G + G + A LF+ M N+ V+WT +I GY++ S+EAL +FR
Sbjct: 293 VVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEALNVFR 352
Query: 196 KMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKR---------GFTAFDIRVL 246
+M+ + P+ +TI++VL A G IH Y K G D+ V
Sbjct: 353 QMIF-SGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDEDLMVY 411
Query: 247 NCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRM--QK 304
N LID Y+KC +A +F+DI +E +N+V+WT +I G A +G +A++ F M +
Sbjct: 412 NALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEP 471
Query: 305 VGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHY---GCLIDMLGRAG 361
G+ PN T +L AC+H + G ++ + D Y CLI+M + G
Sbjct: 472 YGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHQY--DSSAYFVANCLINMYSKCG 529
Query: 362 RLEQAEKTALGIPSEITDVVVWRTLLGACSFHG 394
++ A + + + W +++ HG
Sbjct: 530 DVDTARHVFDSMSQK--SAISWTSMMTGYGMHG 560
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 101/374 (27%), Positives = 166/374 (44%), Gaps = 82/374 (21%)
Query: 72 FDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKL 131
D FT +++ C L G+ H +I GF+S+V++ ALV MY G L+++S +
Sbjct: 115 LDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMI 174
Query: 132 FDEMPER---NLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSN 188
FDE+ +R ++++WN +++ VK +WT
Sbjct: 175 FDEITQRGIDDVISWNSIVSAHVKSSN-----------------AWT------------- 204
Query: 189 EALALFRKMVACEYTEPSE-----ITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDI 243
AL LF KM + +P+ I+I+ +LPA V + +HG + G T D+
Sbjct: 205 -ALDLFSKMTLIVHEKPTNERSDIISIVNILPACGSLKAVPQTKEVHGNAIRNG-TFLDV 262
Query: 244 RVLNCLIDTYAKCGCIFSASKLFEDISVE----------------------------RK- 274
V N LID YAKCG + +A K+F + + RK
Sbjct: 263 FVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKE 322
Query: 275 ----NLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEG 330
++V+WT++I+G++ G EA+ F +M G PN VT +SVL+AC+ G +G
Sbjct: 323 NIPLDMVTWTAVIAGYSQRGCSHEALNVFRQMIFSGSLPNCVTIISVLSACASLGAFSQG 382
Query: 331 LNFFDKMVEECEVL---------PDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVV 381
+ ++ C + D+ Y LIDM + + A IP E +VV
Sbjct: 383 MEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVV 442
Query: 382 VWRTLLGACSFHGN 395
W ++G + +G+
Sbjct: 443 TWTVMIGGHAQYGD 456
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 94/226 (41%), Gaps = 49/226 (21%)
Query: 73 DSFTYSFLIRTCATLSHPNLGTQLHA-VISKVGFQSHVY-VNTALVNMYVSLGFLKDSSK 130
+++T S ++ CA L+ +G Q+HA V+ + S Y V L+NMY G + +
Sbjct: 477 NAYTISCILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVANCLINMYSKCGDVDTARH 536
Query: 131 LFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEA 190
+FD M +++ ++W M+T GY R +EA
Sbjct: 537 VFDSMSQKSAISWTSMMT-------------------------------GYGMHGRGSEA 565
Query: 191 LALFRKMVACEYTEPSEITILAVLPAIWQNGDV-------KSCQLIHGYGEKRGFTAFDI 243
L +F KM + P +IT L VL A G V S +G + A+
Sbjct: 566 LDIFDKMRKAGFV-PDDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYAY-- 622
Query: 244 RVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMH 289
ID A+ G + A K +D+ +E +V W +++S +H
Sbjct: 623 -----AIDLLARFGRLDKAWKTVKDMPMEPTAVV-WVALLSACRVH 662
>gi|356518836|ref|XP_003528083.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Glycine max]
Length = 568
Score = 236 bits (601), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 137/396 (34%), Positives = 218/396 (55%), Gaps = 42/396 (10%)
Query: 60 IYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMY 119
+++H H P FD FT+ ++++ H +H ++ K+GF S++YV AL+N Y
Sbjct: 85 LFSHMHRTNVP-FDHFTFPLILKSSKLNPH-----CIHTLVLKLGFHSNIYVQNALINSY 138
Query: 120 VSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIID 179
+ G L S KL F+EMP R+++SW+ +I
Sbjct: 139 GTSGSLHASLKL-------------------------------FDEMPRRDLISWSSLIS 167
Query: 180 GYTRMNRSNEALALFRKMVACEYT-EPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGF 238
+ + +EAL LF++M E P + +L+V+ A+ G ++ +H + + G
Sbjct: 168 CFAKRGLPDEALTLFQQMQLKESDILPDGVVMLSVISAVSSLGALELGIWVHAFISRIGV 227
Query: 239 TAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVEN 298
+ + + LID Y++CG I + K+F+++ +N+V+WT++I+G A+HG G+EA+E
Sbjct: 228 N-LTVSLGSALIDMYSRCGDIDRSVKVFDEMP--HRNVVTWTALINGLAVHGRGREALEA 284
Query: 299 FGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLG 358
F M + GLKP+R+ F+ VL ACSHGGLVEEG F M E + P ++HYGC++D+LG
Sbjct: 285 FYDMVESGLKPDRIAFMGVLVACSHGGLVEEGRRVFSSMWSEYGIEPALEHYGCMVDLLG 344
Query: 359 RAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYV 418
RAG + +A G+ + V+WRTLLGAC H + + E+ +I E++ + GDYV
Sbjct: 345 RAGMVLEAFDFVEGMRVR-PNSVIWRTLLGACVNHNLLVLAEKAKERIKELDPHHDGDYV 403
Query: 419 LMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
L+ N GVG + E +R M E K PG SLV
Sbjct: 404 LLSNAYGGVGNWVKKEGVRNSMRESKIVKEPGLSLV 439
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 101/250 (40%), Gaps = 49/250 (19%)
Query: 47 PQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQ 106
P +A L++Q+Q S + P D +I ++L LG +HA IS++G
Sbjct: 175 PDEALTLFQQMQL----KESDILP--DGVVMLSVISAVSSLGALELGIWVHAFISRIGVN 228
Query: 107 SHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEM 166
V + +AL++MY G + S K+FDEMP RN+VTW +I GL G
Sbjct: 229 LTVSLGSALIDMYSRCGDIDRSVKVFDEMPHRNVVTWTALINGLAVHG------------ 276
Query: 167 PCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSC 226
R EAL F MV +P I + VL A G V+
Sbjct: 277 -------------------RGREALEAFYDMVESG-LKPDRIAFMGVLVACSHGGLVEEG 316
Query: 227 QLIHG-----YGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTS 281
+ + YG + + C++D + G + A E + V R N V W +
Sbjct: 317 RRVFSSMWSEYGIEPALEHY-----GCMVDLLGRAGMVLEAFDFVEGMRV-RPNSVIWRT 370
Query: 282 IISGFAMHGM 291
++ H +
Sbjct: 371 LLGACVNHNL 380
>gi|147812559|emb|CAN70631.1| hypothetical protein VITISV_020725 [Vitis vinifera]
Length = 713
Score = 236 bits (601), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 132/382 (34%), Positives = 209/382 (54%), Gaps = 36/382 (9%)
Query: 73 DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLF 132
+ +T++ +I CA L+ G QLHA+I +G + + V +++ MY G L SS
Sbjct: 317 NEYTFAAVISGCANLARIEWGEQLHALILHLGLAASLSVENSIMTMYAKCGQLTSSS--- 373
Query: 133 DEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALA 192
+F EM R++VSW+ II GY + +EA
Sbjct: 374 ----------------------------VIFHEMTRRDIVSWSTIIAGYXQGGHVSEAFE 405
Query: 193 LFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDT 252
L M E +P+E + +VL A ++ + +H Y G + VL+ LI+
Sbjct: 406 LLSWM-RMEGPKPTEFALASVLSACGNMAILEHGKQLHAYVLSIGLEHTAM-VLSALINM 463
Query: 253 YAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRV 312
Y KCG I AS++F+ + E ++VSWT++I+G+A HG +E ++ F ++ +VGL+P+ V
Sbjct: 464 YCKCGSIEEASRIFD--AAENDDIVSWTAMINGYAEHGYSREVIDLFEKIPRVGLRPDSV 521
Query: 313 TFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALG 372
TF+ VL+ACSH GLV+ G ++F+ M ++ ++ P +HYGC+ID+L RAGRL AE
Sbjct: 522 TFIGVLSACSHAGLVDLGFHYFNAMSKKYQISPSKEHYGCMIDLLCRAGRLSDAEHMIEA 581
Query: 373 IPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGD 432
+P D VVW TLL AC HG+VE G R +IL++E G ++ + NI A G++ +
Sbjct: 582 MPFHRDD-VVWSTLLRACRVHGDVERGRRTAERILQLEPNCAGTHITLANIYASKGKWRE 640
Query: 433 AERLRRVMDERNAFKVPGCSLV 454
A +R++M + K PG S +
Sbjct: 641 AADIRKLMKSKGVIKEPGWSWI 662
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 90/341 (26%), Positives = 158/341 (46%), Gaps = 50/341 (14%)
Query: 72 FDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKL 131
+DS+T++ ++ CA N G ++HA K GF +V L MY G L+ L
Sbjct: 215 YDSYTFAIALKACADSGALNYGREIHAQAMKKGFDVSSFVANTLATMYNKCGKLEYGLTL 274
Query: 132 FDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEAL 191
F++M R++V+W +IT LV+ G+ E A + + RM S+
Sbjct: 275 FEKMSMRDVVSWTTIITTLVQMGQEECA------------------VQAFIRMRESD--- 313
Query: 192 ALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLID 251
P+E T AV+ ++ + +H G A + V N ++
Sbjct: 314 -----------VSPNEYTFAAVISGCANLARIEWGEQLHALILHLGLAA-SLSVENSIMT 361
Query: 252 TYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNR 311
YAKCG + S+S +F +++ R+++VSW++II+G+ G EA E M+ G KP
Sbjct: 362 MYAKCGQLTSSSVIFHEMT--RRDIVSWSTIIAGYXQGGHVSEAFELLSWMRMEGPKPTE 419
Query: 312 VTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYG----CLIDMLGRAGRLEQAE 367
SVL+AC + ++E G K + + ++H LI+M + G +E+A
Sbjct: 420 FALASVLSACGNMAILEHG-----KQLHAYVLSIGLEHTAMVLSALINMYCKCGSIEEAS 474
Query: 368 KTALGIPSEITDVVVWRTLLGACSFHGN----VEMGERVTR 404
+ + +E D+V W ++ + HG +++ E++ R
Sbjct: 475 R--IFDAAENDDIVSWTAMINGYAEHGYSREVIDLFEKIPR 513
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 101/365 (27%), Positives = 160/365 (43%), Gaps = 49/365 (13%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+ TL+ Y A +A LL+K ++ S L D F S + C S N G
Sbjct: 83 WTTLISGYVNANDSSEALLLFKNMR-----VESGLR--IDPFILSLAHKACGLNSDVNYG 135
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
LH K G + V+V +AL++MY G + + ++F EMP RN+V+W +ITGLV+
Sbjct: 136 ELLHGYAVKTGLVNSVFVGSALLDMYTKNGKIFEGRRVFHEMPMRNVVSWTAIITGLVR- 194
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
GY + EAL F +M E T
Sbjct: 195 -------------------------AGYNK-----EALVYFSEMWRSR-VEYDSYTFAIA 223
Query: 214 LPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVER 273
L A +G + + IH K+GF V N L Y KCG + LFE +S+
Sbjct: 224 LKACADSGALNYGREIHAQAMKKGFDVSSF-VANTLATMYNKCGKLEYGLTLFEKMSM-- 280
Query: 274 KNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNF 333
+++VSWT+II+ G + AV+ F RM++ + PN TF +V++ C++ +E G
Sbjct: 281 RDVVSWTTIITTLVQMGQEECAVQAFIRMRESDVSPNEYTFAAVISGCANLARIEWGEQL 340
Query: 334 FDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEIT--DVVVWRTLLGACS 391
++ + + ++ M + G+L + I E+T D+V W T++
Sbjct: 341 H-ALILHLGLAASLSVENSIMTMYAKCGQLTSSSV----IFHEMTRRDIVSWSTIIAGYX 395
Query: 392 FHGNV 396
G+V
Sbjct: 396 QGGHV 400
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 77/255 (30%), Positives = 123/255 (48%), Gaps = 10/255 (3%)
Query: 135 MPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALF 194
+ + +L N + LVK G L AR +F++M ++ +SWT +I GY N S+EAL LF
Sbjct: 44 ISQTDLPESNKQLKELVKTGHLGNARRMFDKMSQKDEISWTTLISGYVNANDSSEALLLF 103
Query: 195 RKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYA 254
+ M + A N DV +L+HGY K G + V + L+D Y
Sbjct: 104 KNMRVESGLRIDPFILSLAHKACGLNSDVNYGELLHGYAVKTGLVN-SVFVGSALLDMYT 162
Query: 255 KCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTF 314
K G IF ++F ++ + +N+VSWT+II+G G KEA+ F M + ++ + TF
Sbjct: 163 KNGKIFEGRRVFHEMPM--RNVVSWTAIITGLVRAGYNKEALVYFSEMWRSRVEYDSYTF 220
Query: 315 LSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHY--GCLIDMLGRAGRLEQAEKTALG 372
L AC+ G + G + +++ D+ + L M + G+LE L
Sbjct: 221 AIALKACADSGALNYGREIHAQAMKKG---FDVSSFVANTLATMYNKCGKLEYG--LTLF 275
Query: 373 IPSEITDVVVWRTLL 387
+ DVV W T++
Sbjct: 276 EKMSMRDVVSWTTII 290
>gi|359488803|ref|XP_002272525.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950 [Vitis vinifera]
Length = 1291
Score = 236 bits (601), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 129/382 (33%), Positives = 213/382 (55%), Gaps = 36/382 (9%)
Query: 73 DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLF 132
D F + F +++CA LS G +H + G + ++V+ ALV+MY
Sbjct: 817 DKFAFPFALKSCAGLSDLQRGKVIHQHLVCCGCSNDLFVDAALVDMYA------------ 864
Query: 133 DEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALA 192
K G++E AR +F++M R++VSWT +I GY ++E L
Sbjct: 865 -------------------KCGDIEAARLVFDKMAVRDLVSWTSMISGYAHNGYNSETLG 905
Query: 193 LFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDT 252
F M + P+ ++IL+VL A G ++ + H Y + GF FDI V ++D
Sbjct: 906 FFDLMRSSGVI-PNRVSILSVLLACGNLGALRKGEWFHSYVIQTGFE-FDILVATAIMDM 963
Query: 253 YAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRV 312
Y+KCG + A LF++ + K+LV W+++I+ + +HG G++A++ F +M K G++P+ V
Sbjct: 964 YSKCGSLDLARCLFDETA--GKDLVCWSAMIASYGIHGHGRKAIDLFDQMVKAGVRPSHV 1021
Query: 313 TFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALG 372
TF VL+ACSH GL+EEG +F M EE + + +Y C++D+LGRAG+L +A
Sbjct: 1022 TFTCVLSACSHSGLLEEGKMYFQLMTEEFVIARKLSNYACMVDLLGRAGQLSEAVDLIEN 1081
Query: 373 IPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGD 432
+P E D +W +LLGAC H N+++ E++ + ++ + G +VL+ NI A R+ +
Sbjct: 1082 MPVE-PDASIWGSLLGACRIHNNLDLAEKIADHLFHLDPVHAGYHVLLSNIYAAKSRWNE 1140
Query: 433 AERLRRVMDERNAFKVPGCSLV 454
E++R++M R A K+ G SLV
Sbjct: 1141 VEKVRKMMARRGANKIQGFSLV 1162
Score = 214 bits (546), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 131/422 (31%), Positives = 227/422 (53%), Gaps = 45/422 (10%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
++T++ Y+ E+ +A L+ ++ + P +S T ++ CA + G
Sbjct: 275 WSTMIACYANNEAANEALNLFHEMIE------KRFEP--NSVTVVSALQACAVSRNLEEG 326
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
++H + GF+ V+TAL++MY+ P+
Sbjct: 327 KKIHKIAVWKGFELDFSVSTALIDMYMKC-----------SCPDE--------------- 360
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
A LF+ +P ++VVSW ++ GY + + +++ +FR M++ + +P + ++ +
Sbjct: 361 -----AVDLFQRLPKKDVVSWVALLSGYAQNGMAYKSMGVFRNMLS-DGIQPDAVAVVKI 414
Query: 214 LPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVER 273
L A + G + +HGY + GF + ++ V LI+ Y+KCG + A KLF+ + V
Sbjct: 415 LAASSELGIFQQALCLHGYVVRSGFNS-NVFVGASLIELYSKCGSLGDAVKLFKGMIV-- 471
Query: 274 KNLVSWTSIISGFAMHGMGKEAVENFGRMQKVG-LKPNRVTFLSVLNACSHGGLVEEGLN 332
+++V W+S+I+ + +HG G EA+E F +M K ++PN VTFLS+L+ACSH GLVEEGL
Sbjct: 472 RDVVIWSSMIAAYGIHGRGGEALEIFDQMVKNSTVRPNNVTFLSILSACSHAGLVEEGLK 531
Query: 333 FFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSF 392
FD+MV + ++ PD +H+G ++D+LGR G+L +A +P VW LLGAC
Sbjct: 532 IFDRMVHDYQLRPDSEHFGIMVDLLGRIGQLGKAMDIINRMPIP-AGPHVWGALLGACRI 590
Query: 393 HGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCS 452
H N+EMGE + + ++ + G Y+L+ NI A G++ + LR + ER K+ G S
Sbjct: 591 HHNIEMGEAAAKNLFWLDPSHAGYYILLSNIYAVDGKWDNVAELRTRIKERGLKKMFGQS 650
Query: 453 LV 454
+V
Sbjct: 651 MV 652
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 111/401 (27%), Positives = 179/401 (44%), Gaps = 47/401 (11%)
Query: 32 QLFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPN 91
L+N+ L Y + ++ L+ + I T +P D+FT ++ CA L
Sbjct: 68 HLWNSTLRSYCREKQWEETLRLFHLM--ICTAGEAP-----DNFTIPIALKACAGLRMLE 120
Query: 92 LGTQLHAVISKVG-FQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGL 150
LG +H K S ++V +ALV +Y G + ++ K+F+E
Sbjct: 121 LGKVIHGFAKKNDEIGSDMFVGSALVELYSKCGQMGEALKVFEE---------------- 164
Query: 151 VKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITI 210
F R + V WT ++ GY + N EALALF +MV + +T+
Sbjct: 165 -------FQRP--------DTVLWTSMVTGYQQNNDPEEALALFSQMVMMDCVVLDPVTL 209
Query: 211 LAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDIS 270
++V+ A Q +VK+ +HG +R F D+ ++N L++ YAK GC A+ LF +
Sbjct: 210 VSVVSACAQLLNVKAGSCVHGLVIRREFDG-DLPLVNSLLNLYAKTGCEKIAANLFSKMP 268
Query: 271 VERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEG 330
K+++SW+++I+ +A + EA+ F M + +PN VT +S L AC+ +EEG
Sbjct: 269 --EKDVISWSTMIACYANNEAANEALNLFHEMIEKRFEPNSVTVVSALQACAVSRNLEEG 326
Query: 331 LNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGAC 390
V + L D LIDM + ++A +P + DVV W LL
Sbjct: 327 KKIHKIAVWKGFEL-DFSVSTALIDMYMKCSCPDEAVDLFQRLPKK--DVVSWVALLSGY 383
Query: 391 SFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFG 431
+ +G V R +L G D V + ILA G
Sbjct: 384 AQNGMAYKSMGVFRNML--SDGIQPDAVAVVKILAASSELG 422
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/245 (30%), Positives = 126/245 (51%), Gaps = 7/245 (2%)
Query: 151 VKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITI 210
V + ++ A +FE++P W +I G+ R +L L+ KM+ + +P +
Sbjct: 763 VSFNRIDAASIVFEDIPNPCSFLWNVMIRGFATDGRFLSSLELYSKMME-KGLKPDKFAF 821
Query: 211 LAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDIS 270
L + D++ ++IH + G + D+ V L+D YAKCG I +A +F+ ++
Sbjct: 822 PFALKSCAGLSDLQRGKVIHQHLVCCGCSN-DLFVDAALVDMYAKCGDIEAARLVFDKMA 880
Query: 271 VERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEG 330
V ++LVSWTS+ISG+A +G E + F M+ G+ PNRV+ LSVL AC + G + +G
Sbjct: 881 V--RDLVSWTSMISGYAHNGYNSETLGFFDLMRSSGVIPNRVSILSVLLACGNLGALRKG 938
Query: 331 LNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGAC 390
+F V + DI ++DM + G L+ A L + D+V W ++ +
Sbjct: 939 -EWFHSYVIQTGFEFDILVATAIMDMYSKCGSLDLAR--CLFDETAGKDLVCWSAMIASY 995
Query: 391 SFHGN 395
HG+
Sbjct: 996 GIHGH 1000
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/245 (29%), Positives = 121/245 (49%), Gaps = 15/245 (6%)
Query: 151 VKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITI 210
K L+ AR +F+E P NV W + Y R + E L LF M+ P TI
Sbjct: 47 AKCASLQAARKVFDETPHPNVHLWNSTLRSYCREKQWEETLRLFHLMICTAGEAPDNFTI 106
Query: 211 LAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDIS 270
L A ++ ++IHG+ +K D+ V + L++ Y+KCG + A K+FE+
Sbjct: 107 PIALKACAGLRMLELGKVIHGFAKKNDEIGSDMFVGSALVELYSKCGQMGEALKVFEEF- 165
Query: 271 VERKNLVSWTSIISGFAMHGMGKEAVENFGR---MQKVGLKPNRVTFLSVLNACSHGGLV 327
+R + V WTS+++G+ + +EA+ F + M V L P VT +SV++AC+ V
Sbjct: 166 -QRPDTVLWTSMVTGYQQNNDPEEALALFSQMVMMDCVVLDP--VTLVSVVSACAQLLNV 222
Query: 328 EEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEI--TDVVVWRT 385
+ G + +V E D+ L+++ + G EK A + S++ DV+ W T
Sbjct: 223 KAG-SCVHGLVIRREFDGDLPLVNSLLNLYAKTG----CEKIAANLFSKMPEKDVISWST 277
Query: 386 LLGAC 390
++ AC
Sbjct: 278 MI-AC 281
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 72/158 (45%), Gaps = 13/158 (8%)
Query: 241 FDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFG 300
+D R+L Y I +AS +FEDI L W +I GFA G ++E +
Sbjct: 750 YDSRILTKFAIMYVSFNRIDAASIVFEDIPNPCSFL--WNVMIRGFATDGRFLSSLELYS 807
Query: 301 RMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRA 360
+M + GLKP++ F L +C+ ++ G +V C D+ L+DM +
Sbjct: 808 KMMEKGLKPDKFAFPFALKSCAGLSDLQRGKVIHQHLV-CCGCSNDLFVDAALVDMYAKC 866
Query: 361 GRLEQA----EKTALGIPSEITDVVVWRTLLGACSFHG 394
G +E A +K A + D+V W +++ + +G
Sbjct: 867 GDIEAARLVFDKMA------VRDLVSWTSMISGYAHNG 898
>gi|359472798|ref|XP_002274984.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 324
Score = 236 bits (601), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 126/324 (38%), Positives = 197/324 (60%), Gaps = 9/324 (2%)
Query: 135 MPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALF 194
MP +N VTWN MIT K G+++ AR +FE+MP R++ SW+ ++ GY + LALF
Sbjct: 1 MPHKNTVTWNTMITAYSKSGDVKKARLVFEQMPLRDLASWSAMVAGYMYGGEWHSGLALF 60
Query: 195 RKMVACEYTEPSEITILAVLPAIWQNGDVK--SCQLIHGYGEKRGFTAFDIRVLNCLIDT 252
R+MV E P ++T+ +VL + G + + IHG+ K G+ + + L+D
Sbjct: 61 REMVVNEGLRPDKVTLGSVLSGCARMGSLGLLVGRSIHGFTAKNGWE-LSVDLGTVLVDM 119
Query: 253 YAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRV 312
YAKCG + SA ++F+ ++ KN+ SWT++I G A HG GKEA+ F MQ +G+KPN +
Sbjct: 120 YAKCGFLKSAFRVFD--LMQEKNVASWTALICGSAQHGYGKEALSMFELMQDMGVKPNEM 177
Query: 313 TFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALG 372
TF +L+AC+ GLVEEG +F+K +EE + P I+H+GC++D+ G+AG LE+A +
Sbjct: 178 TFTGILSACAQAGLVEEGRKYFNK-IEEYGLEPRIQHFGCMVDLFGKAGLLEEAYEIINS 236
Query: 373 IPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMER--GYGGDYVLMYNILAGVGRF 430
+ E +VV+W + L +C H E+ ERVT ++L + GG Y L+ N+ ++
Sbjct: 237 MKLE-PNVVLWSSFLSSCKVHKQFELAERVTEQVLRTVKPENDGGVYTLISNLFVLNDKW 295
Query: 431 GDAERLRRVMDERNAFKVPGCSLV 454
DAER+R++M + K G S +
Sbjct: 296 DDAERVRKLMVNQKVRKARGSSFI 319
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 122/283 (43%), Gaps = 62/283 (21%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQ--LQQIYTHS------------HSPLPPLF------- 72
+NT++ YS + +KA L+++Q L+ + + S HS L LF
Sbjct: 9 WNTMITAYSKSGDVKKARLVFEQMPLRDLASWSAMVAGYMYGGEWHSGLA-LFREMVVNE 67
Query: 73 ----DSFTYSFLIRTCATLSHPNL--GTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLK 126
D T ++ CA + L G +H +K G++ V + T LV+MY GFLK
Sbjct: 68 GLRPDKVTLGSVLSGCARMGSLGLLVGRSIHGFTAKNGWELSVDLGTVLVDMYAKCGFLK 127
Query: 127 DSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNR 186
+ ++FD M E+N+ +W +I G + G + A S+FE M V
Sbjct: 128 SAFRVFDLMQEKNVASWTALICGSAQHGYGKEALSMFELMQDMGV--------------- 172
Query: 187 SNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVL 246
+P+E+T +L A Q G V+ + E+ G I+
Sbjct: 173 -----------------KPNEMTFTGILSACAQAGLVEEGRKYFNKIEEYGLEP-RIQHF 214
Query: 247 NCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMH 289
C++D + K G + A ++ + +E N+V W+S +S +H
Sbjct: 215 GCMVDLFGKAGLLEEAYEIINSMKLE-PNVVLWSSFLSSCKVH 256
>gi|218186297|gb|EEC68724.1| hypothetical protein OsI_37217 [Oryza sativa Indica Group]
Length = 387
Score = 236 bits (601), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 138/384 (35%), Positives = 212/384 (55%), Gaps = 39/384 (10%)
Query: 95 QLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGL---- 150
+LH + K+G YV ALV+MY G L D+ K FDEMP++N V+WN ++
Sbjct: 2 ELHCRVLKLGCGKDRYVRNALVSMYGKFGRLGDARKAFDEMPDKNAVSWNALVGAHRAAA 61
Query: 151 ----------------VKWGELEFARS-----------LFEEMPCRNVVSWTGIIDGYTR 183
+ W E AR+ +F EMP R+ VSW +I GYT+
Sbjct: 62 DWMGADRVSQAMPVRNLSWWNAEIARNVRIGYMDEAARIFSEMPERDAVSWNSLISGYTK 121
Query: 184 MNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDI 243
+ + +AL +F++M +P+E+T++ VL A + G + IH + +G A D
Sbjct: 122 LGKYTQALGIFQEMQE-NGIQPTELTLVLVLGACAKIGKLDLGTNIHRNLQNKGIVA-DG 179
Query: 244 RVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQ 303
V N LID YAKCG + A K+F+ +S+ +++ W ++I GF++HG +EA+E F M+
Sbjct: 180 LVGNALIDMYAKCGMLDLAKKVFDRMSM--RDITCWNAMIVGFSVHGCSREALELFDSMK 237
Query: 304 KVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRL 363
++PN VTFL VL ACSHGGLV EG +F+ M+E+ ++P +KHYGC+IDML R G++
Sbjct: 238 ---IEPNPVTFLGVLTACSHGGLVNEGRKYFNSMIEDYRIVPYVKHYGCMIDMLCRYGKI 294
Query: 364 EQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNI 423
E+A PS + V+W+ LL AC HG++++ ++ E+ G V + N+
Sbjct: 295 EEAYLMIKENPSTASS-VLWKMLLAACRVHGHIDLAYMFFHELRELILTDNGGLVTISNV 353
Query: 424 LAGVGRFGDAERLRRVMDERNAFK 447
A R+ D E LR + +A K
Sbjct: 354 YAEAKRWDDVEHLRMKVRCNSALK 377
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 76/166 (45%), Gaps = 9/166 (5%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+N+L+ Y+ +A +++++Q+ + + P T ++ CA + +LG
Sbjct: 112 WNSLISGYTKLGKYTQALGIFQEMQE------NGIQPT--ELTLVLVLGACAKIGKLDLG 163
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
T +H + G + V AL++MY G L + K+FD M R++ WN MI G
Sbjct: 164 TNIHRNLQNKGIVADGLVGNALIDMYAKCGMLDLAKKVFDRMSMRDITCWNAMIVGFSVH 223
Query: 154 GELEFARSLFEEMPCR-NVVSWTGIIDGYTRMNRSNEALALFRKMV 198
G A LF+ M N V++ G++ + NE F M+
Sbjct: 224 GCSREALELFDSMKIEPNPVTFLGVLTACSHGGLVNEGRKYFNSMI 269
>gi|125528598|gb|EAY76712.1| hypothetical protein OsI_04667 [Oryza sativa Indica Group]
Length = 548
Score = 236 bits (601), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 136/363 (37%), Positives = 207/363 (57%), Gaps = 25/363 (6%)
Query: 103 VGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSL 162
+G Q +V T V YV+ G ++ + +LF++MP RN W+ M+TG K G + A+++
Sbjct: 180 LGMQ-NVVTWTVAVQAYVAAGDMETARELFNKMPARNAFVWSSMVTGNFKAGNADEAQAV 238
Query: 163 FEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGD 222
F+++P RN+V+W +I GY +M +AL F M+ + +P E T+ VL A Q G
Sbjct: 239 FDKIPVRNLVNWNALIAGYAKMGCCEKALEAFHSMLK-DKIKPDEFTMAGVLSACAQLGS 297
Query: 223 VKSCQLIHGYGEKRGFTAFDIR----VLNCLIDTYAKCGCIFSASKLFEDISVERKNLVS 278
++ + +H + IR V+N L+D +AKCG + A +F+++ + +N
Sbjct: 298 LEQARKVHNF-----IIQHRIRKNQFVMNGLVDMFAKCGDLAFARNIFDNM--QWRNTEC 350
Query: 279 WTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMV 338
W S+IS + HG EA+ F +M+ KPN +T L+VL AC+HGG V+EGL F K
Sbjct: 351 WNSMISALSSHGQSIEAIRLFSKMECSEQKPNEITLLAVLGACTHGGFVDEGLRIFSKF- 409
Query: 339 EECEVLPDIKHYGCLIDMLGRAGRLEQAE---KTALGIPSEITDVVVWRTLLGACSFHGN 395
+ V ++HYGCL+D+LGRAGRL +A K L P+E V+W +LLGAC HG+
Sbjct: 410 DIYGVAAAVEHYGCLVDLLGRAGRLREAYEIVKNMLVEPNE----VIWGSLLGACRVHGD 465
Query: 396 VEMGERVTRKILEMERGY----GGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGC 451
EM E V+ +I ++ +Y+L+ NI+A R+ AER+RR M K PGC
Sbjct: 466 AEMSELVSSEIHQLHSRRVSTNDAEYILLSNIMASSERWEQAERMRRKMALHGVGKTPGC 525
Query: 452 SLV 454
S V
Sbjct: 526 SSV 528
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 101/380 (26%), Positives = 172/380 (45%), Gaps = 24/380 (6%)
Query: 16 QIHSHLLTTNSLLHHSQLFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSF 75
Q+H+ LT ++ L Y+ ++A ++Y +L TH H PL +
Sbjct: 8 QLHALYLTRGC--RDPDMWANLAKVYASNSFLREAAIIYSKLLPHRTH-HLPLVIV---- 60
Query: 76 TYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEM 135
L++ A+ + P LG LHA K V T LV++Y G L D+ ++FD M
Sbjct: 61 ----LLKATASRADPVLGRALHAEAVKSANAHDRLVGTTLVSVYCKCGLLADARRVFDGM 116
Query: 136 PERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFR 195
+RN VT N M+ G G++ A +LF M R V+W +I G+ E F
Sbjct: 117 LDRNAVTCNAMLAGYAAAGDMVSAEALFAGMGSRTPVTWATLIRGFAGKGDMAETRRWFE 176
Query: 196 KMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAK 255
M + +T + A GD+++ + + + + AF V + ++ K
Sbjct: 177 AM---PLGMQNVVTWTVAVQAYVAAGDMETAREL--FNKMPARNAF---VWSSMVTGNFK 228
Query: 256 CGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFL 315
G A +F+ I V +NLV+W ++I+G+A G ++A+E F M K +KP+ T
Sbjct: 229 AGNADEAQAVFDKIPV--RNLVNWNALIAGYAKMGCCEKALEAFHSMLKDKIKPDEFTMA 286
Query: 316 SVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPS 375
VL+AC+ G +E+ + +++ + + L+DM + G L A +
Sbjct: 287 GVLSACAQLGSLEQARKVHNFIIQH-RIRKNQFVMNGLVDMFAKCGDLAFARNIFDNMQW 345
Query: 376 EITDVVVWRTLLGACSFHGN 395
T+ W +++ A S HG
Sbjct: 346 RNTE--CWNSMISALSSHGQ 363
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 106/254 (41%), Gaps = 36/254 (14%)
Query: 37 LLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLGTQL 96
L+++ +L K K L+ ++ + P D FT + ++ CA L ++
Sbjct: 247 LVNWNALIAGYAKMGCCEKALEAFHSMLKDKIKP--DEFTMAGVLSACAQLGSLEQARKV 304
Query: 97 HAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGEL 156
H I + + + +V LV+M+ G L + +FD M RN WN MI+ L G+
Sbjct: 305 HNFIIQHRIRKNQFVMNGLVDMFAKCGDLAFARNIFDNMQWRNTECWNSMISALSSHGQ- 363
Query: 157 EFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPA 216
S EA+ LF KM C +P+EIT+LAVL A
Sbjct: 364 ------------------------------SIEAIRLFSKM-ECSEQKPNEITLLAVLGA 392
Query: 217 IWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNL 276
G V I + G A + CL+D + G + A ++ +++ VE N
Sbjct: 393 CTHGGFVDEGLRIFSKFDIYGVAA-AVEHYGCLVDLLGRAGRLREAYEIVKNMLVE-PNE 450
Query: 277 VSWTSIISGFAMHG 290
V W S++ +HG
Sbjct: 451 VIWGSLLGACRVHG 464
>gi|347954514|gb|AEP33757.1| organelle transcript processing 82, partial [Aethionema
cordifolium]
Length = 679
Score = 235 bits (600), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 132/384 (34%), Positives = 217/384 (56%), Gaps = 38/384 (9%)
Query: 73 DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLF 132
D T + ++ TC + LG Q+H+ I GF S++ + AL+++Y
Sbjct: 209 DESTMATVLSTCTHSGNVELGRQIHSWIDNHGFGSNLKLVNALIDLYS------------ 256
Query: 133 DEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALA 192
K GE+E A LFE + ++V+SW +I GY +N EAL
Sbjct: 257 -------------------KCGEMERAHGLFEGLQYKDVISWNTLIGGYAYINHHKEALL 297
Query: 193 LFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKR--GFTAFDIRVLNCLI 250
+F++M+ T P+++T+L++LPA G + + IH Y +K+ G + + LI
Sbjct: 298 VFQEMLKLGET-PNDVTMLSILPACAHLGAIDIGRWIHVYIDKKLKGIIT-NTSLQTSLI 355
Query: 251 DTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPN 310
D YAKCG I +A+++F+ ++ K+L S ++I GFAMHG A + RM+K G++P+
Sbjct: 356 DMYAKCGNIEAANQVFD--TILNKSLSSCNAMIFGFAMHGRADAAFDLLSRMKKDGIEPD 413
Query: 311 RVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTA 370
+TF+ +L+ACSH GL + G F M + + P ++HYGC+ID+LGR+G ++AE+
Sbjct: 414 DITFVGLLSACSHAGLSDLGRKIFKSMTLDYRIEPKLEHYGCMIDLLGRSGLFKEAEELI 473
Query: 371 LGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRF 430
+ E D V+W +LL AC H N+E+GE + +K++++E G YVL+ NI A R+
Sbjct: 474 NSMTME-PDGVIWGSLLKACKIHKNLELGELIAQKLMKIEPKNPGSYVLLSNIYATSARW 532
Query: 431 GDAERLRRVMDERNAFKVPGCSLV 454
D R+R +++++ KVPGCS +
Sbjct: 533 DDVARVRTLLNDKGLKKVPGCSSI 556
Score = 201 bits (510), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 136/448 (30%), Positives = 228/448 (50%), Gaps = 58/448 (12%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+NT++ ++L+ P A LY +Y S P +S+T+ FL ++CA G
Sbjct: 46 WNTMIRGHALSSDPISALNLY-----VYMISLGLSP---NSYTFPFLFKSCAKSKAAQEG 97
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
Q+HA I K G ++V+T+L++MY G ++D+ K+FD R++V++ MITG
Sbjct: 98 KQIHAQILKYGLTVDLHVHTSLISMYAQNGIVEDAHKVFDTSSHRDVVSYTAMITGYASR 157
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
G ++ A+ +F+E+P ++VVSW +I GY + R EAL LF +M+ + +P E T+ V
Sbjct: 158 GNMDKAQKMFDEIPIKDVVSWNAMISGYAEIGRYKEALELFNEMMKMD-VKPDESTMATV 216
Query: 214 LPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVER 273
L +G+V+ + IH + + GF + +++++N LID Y+KCG + A LFE ++
Sbjct: 217 LSTCTHSGNVELGRQIHSWIDNHGFGS-NLKLVNALIDLYSKCGEMERAHGLFE--GLQY 273
Query: 274 KNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGL-- 331
K+++SW ++I G+A KEA+ F M K+G PN VT LS+L AC+H G ++ G
Sbjct: 274 KDVISWNTLIGGYAYINHHKEALLVFQEMLKLGETPNDVTMLSILPACAHLGAIDIGRWI 333
Query: 332 -NFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEK---------------------- 368
+ DK ++ ++ + LIDM + G +E A +
Sbjct: 334 HVYIDKKLK--GIITNTSLQTSLIDMYAKCGNIEAANQVFDTILNKSLSSCNAMIFGFAM 391
Query: 369 -----TALGIPSEIT------DVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGD- 416
A + S + D + + LL ACS G ++G ++ + M Y +
Sbjct: 392 HGRADAAFDLLSRMKKDGIEPDDITFVGLLSACSHAGLSDLGRKIFK---SMTLDYRIEP 448
Query: 417 ----YVLMYNILAGVGRFGDAERLRRVM 440
Y M ++L G F +AE L M
Sbjct: 449 KLEHYGCMIDLLGRSGLFKEAEELINSM 476
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 83/338 (24%), Positives = 158/338 (46%), Gaps = 22/338 (6%)
Query: 102 KVGFQSHVYVNTALVNMYVSLGF---LKDSSKLFDEMPERNLVTWNVMITGLVKWGELEF 158
K+G + Y + L++ + + L + +F + E N ++WN MI G +
Sbjct: 2 KIGLHNTNYALSKLLDFCILTPYFHGLPYAISVFKSIQEPNQLSWNTMIRGHALSSDPIS 61
Query: 159 ARSLFEEMP----CRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVL 214
A +L+ M N ++ + + + E + +++ +Y ++ + L
Sbjct: 62 ALNLYVYMISLGLSPNSYTFPFLFKSCAKSKAAQEGKQIHAQIL--KYGLTVDLHVHTSL 119
Query: 215 PAIW-QNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVER 273
+++ QNG V+ + R D+ +I YA G + A K+F++I +
Sbjct: 120 ISMYAQNGIVEDAHKVFDTSSHR-----DVVSYTAMITGYASRGNMDKAQKMFDEIPI-- 172
Query: 274 KNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNF 333
K++VSW ++ISG+A G KEA+E F M K+ +KP+ T +VL+ C+H G VE G
Sbjct: 173 KDVVSWNAMISGYAEIGRYKEALELFNEMMKMDVKPDESTMATVLSTCTHSGNVELGRQI 232
Query: 334 FDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFH 393
++ ++K LID+ + G +E+A G+ + DV+ W TL+G ++
Sbjct: 233 H-SWIDNHGFGSNLKLVNALIDLYSKCGEMERAHGLFEGL--QYKDVISWNTLIGGYAYI 289
Query: 394 GNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFG 431
+ + V +++L++ G + V M +IL G
Sbjct: 290 NHHKEALLVFQEMLKL--GETPNDVTMLSILPACAHLG 325
>gi|359481919|ref|XP_003632692.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Vitis vinifera]
Length = 1053
Score = 235 bits (600), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 128/384 (33%), Positives = 223/384 (58%), Gaps = 38/384 (9%)
Query: 73 DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLF 132
+ FT++ ++ +C + S LG Q+H+++ K F+SH++V ++L++MY G + ++ ++F
Sbjct: 577 NEFTFATVLTSCTSSSGFQLGRQIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVF 636
Query: 133 DEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALA 192
D +PER++V+ +I+ GY ++ EAL
Sbjct: 637 DGLPERDVVSCTAIIS-------------------------------GYAQLGLDEEALD 665
Query: 193 LFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDT 252
LFR++ E + +T +VL A+ + + +H + R F + + N LID
Sbjct: 666 LFRRLQR-EGMRSNYVTYASVLTALSGLAALDHGRQVHSH-VLRAKLPFYVVLQNSLIDM 723
Query: 253 YAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVG-LKPNR 311
Y+KCG + + ++F+ S+ + ++SW +++ G++ HG+G+EAVE F M++ +KP+
Sbjct: 724 YSKCGSLTYSRRIFD--SMPERTVISWNAMLVGYSKHGLGREAVELFKLMKEENKVKPDS 781
Query: 312 VTFLSVLNACSHGGLVEEGLNFFDKMVEECEVL-PDIKHYGCLIDMLGRAGRLEQAEKTA 370
VTFL+VL+ CSHGG+ + GL F +MV + + P+I+HYGC++D+ GRAGR+E+A +
Sbjct: 782 VTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEEAFEFI 841
Query: 371 LGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRF 430
+P E T +W +LLGAC H NV +GE V R++LE+E G+YV++ N+ A GR+
Sbjct: 842 KKMPFEPT-AAIWGSLLGACRVHQNVHIGEFVARRLLEIESENAGNYVILSNLYASAGRW 900
Query: 431 GDAERLRRVMDERNAFKVPGCSLV 454
D +R +M E+ K PG S +
Sbjct: 901 DDVRTVRELMKEKAVIKEPGRSWI 924
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 103/362 (28%), Positives = 168/362 (46%), Gaps = 45/362 (12%)
Query: 77 YSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMP 136
Y ++ C + + G ++HA + K ++ VY+ T L+ +Y L D
Sbjct: 480 YDSVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGD--------- 530
Query: 137 ERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRK 196
AR + +EMP RNVVSWT +I GY++ ++EAL LF +
Sbjct: 531 ----------------------ARRVLDEMPERNVVSWTAMISGYSQRGYASEALHLFVE 568
Query: 197 MVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKC 256
M+ T P+E T VL + + + + IH K F + I V + L+D YAK
Sbjct: 569 MLMSG-TAPNEFTFATVLTSCTSSSGFQLGRQIHSLVIKTSFESH-IFVGSSLLDMYAKA 626
Query: 257 GCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLS 316
G I A ++F+ + +++VS T+IISG+A G+ +EA++ F R+Q+ G++ N VT+ S
Sbjct: 627 GKICEARRVFDGLP--ERDVVSCTAIISGYAQLGLDEEALDLFRRLQREGMRSNYVTYAS 684
Query: 317 VLNACSHGGLVEEGLNFFDKMVEECEVLP-DIKHYGCLIDMLGRAGRLEQAEKTALGIPS 375
VL A S ++ G ++ LP + LIDM + G L + + +P
Sbjct: 685 VLTALSGLAALDHGRQVHSHVLR--AKLPFYVVLQNSLIDMYSKCGSLTYSRRIFDSMPE 742
Query: 376 EITDVVVWRTLLGACSFHGNVEMGERVTR--KILEMERGYGGDYVLMYNILAGVGRFGDA 433
V+ W +L S HG +G K+++ E D V +L+G G
Sbjct: 743 RT--VISWNAMLVGYSKHG---LGREAVELFKLMKEENKVKPDSVTFLAVLSGCSHGGME 797
Query: 434 ER 435
+R
Sbjct: 798 DR 799
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 92/201 (45%), Gaps = 7/201 (3%)
Query: 249 LIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLK 308
LI Y KC C+ A ++ +++ +N+VSWT++ISG++ G EA+ F M G
Sbjct: 518 LIVLYNKCRCLGDARRVLDEMP--ERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTA 575
Query: 309 PNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEK 368
PN TF +VL +C+ + G +V + I L+DM +AG++ +A +
Sbjct: 576 PNEFTFATVLTSCTSSSGFQLGRQIH-SLVIKTSFESHIFVGSSLLDMYAKAGKICEARR 634
Query: 369 TALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVG 428
G+P DVV ++ + G E + R++ G +YV ++L +
Sbjct: 635 VFDGLPER--DVVSCTAIISGYAQLGLDEEALDLFRRL--QREGMRSNYVTYASVLTALS 690
Query: 429 RFGDAERLRRVMDERNAFKVP 449
+ R+V K+P
Sbjct: 691 GLAALDHGRQVHSHVLRAKLP 711
>gi|293335745|ref|NP_001168519.1| uncharacterized protein LOC100382299 [Zea mays]
gi|223948835|gb|ACN28501.1| unknown [Zea mays]
Length = 599
Score = 235 bits (600), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 139/420 (33%), Positives = 234/420 (55%), Gaps = 46/420 (10%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+N+L+ A S A +Y+++ + + SP P +SFT +F ++ CA + P G
Sbjct: 94 YNSLIRALPAAGS-APALAVYRRMLR----AGSPRP---NSFTLAFALKACAAVPAPGEG 145
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
QLHA + G + YV T L+N+Y K
Sbjct: 146 RQLHAQALRQGLATSAYVQTGLLNLYA-------------------------------KC 174
Query: 154 GELEFARSLFEEMPC-RNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILA 212
++ AR++F+ M +N+V+W+ ++ GY+R+ NEAL LFR+M A EP E+T+++
Sbjct: 175 EQVALARTVFDGMAGDKNLVAWSAMVSGYSRVGMVNEALGLFREMQAVG-VEPDEVTMVS 233
Query: 213 VLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVE 272
V+ A + G + + +H Y +++G T D+ + LID YAKCG I A +F D VE
Sbjct: 234 VISACAKAGALDLGKWVHAYIDRKGIT-VDLELSTALIDMYAKCGLIERARGVF-DAMVE 291
Query: 273 RKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLN 332
K+ +W+++I GFA+HG+ ++A+ F RM ++ ++PN VTF+ VL+AC+H GLVE+G
Sbjct: 292 -KDTKAWSAMIVGFAIHGLVEDALGLFSRMLELKVRPNNVTFIGVLSACAHSGLVEDGRR 350
Query: 333 FFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSF 392
++ M + + P +++YGC++D+L R+G L+ A +G+P + V+WRTLL AC
Sbjct: 351 YWSIM-QNLGIKPSMENYGCMVDLLCRSGLLDDAYSFVIGMPVS-PNSVIWRTLLVACKS 408
Query: 393 HGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCS 452
+++ E T+++LE+E +YVL+ N+ A ++ LRR M +N + G S
Sbjct: 409 SNRIDIAESATKRLLELEPHNPENYVLLSNLYASNSQWDRVSYLRRKMKGKNVTAIAGRS 468
>gi|225456517|ref|XP_002281018.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 624
Score = 235 bits (600), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 135/383 (35%), Positives = 209/383 (54%), Gaps = 37/383 (9%)
Query: 73 DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLF 132
D T + C L +LG ++H + + GF V+V ++L++MY
Sbjct: 230 DEVTLVSALSVCGRLGLLDLGKKIHGLFTGSGFVLDVFVGSSLIDMYS------------ 277
Query: 133 DEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALA 192
K G++E AR +F+ +P RN V WT +I GY + + EA+
Sbjct: 278 -------------------KCGQIEDARKVFDRIPHRNTVCWTSMIAGYAQSDLFKEAIE 318
Query: 193 LFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDT 252
LFR+M + + TI VL A G + + IH Y E R D+ N LI
Sbjct: 319 LFREMQIGGFAADAA-TIACVLSACGHWGALAQGRWIHLYCE-RNSIEMDLNARNALIGM 376
Query: 253 YAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVG-LKPNR 311
Y+KCG I A ++F ++ + ++ SW+++ISG AM+G +A+ F +M+ + ++PN
Sbjct: 377 YSKCGDIQKALEIFHGLT--QPDIFSWSAVISGLAMNGESDKALHLFSQMEMISDIRPNE 434
Query: 312 VTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTAL 371
+TFL VL AC+HGG V++GL +F+ M + + P I+HYGC++D+LGRA L +AEK
Sbjct: 435 ITFLGVLCACNHGGFVDKGLYYFNAMTQIYNLTPGIEHYGCMVDLLGRANLLVEAEKFIR 494
Query: 372 GIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFG 431
+P + DVV+WR+LL AC HGN+E+ E ++I E+E G VL+ N+ A R+G
Sbjct: 495 TLPIQ-PDVVIWRSLLFACRNHGNIELAEFAAKQIEELEPRRCGARVLLSNVYASASRWG 553
Query: 432 DAERLRRVMDERNAFKVPGCSLV 454
D +R+R+ M + K PGCS V
Sbjct: 554 DVKRVRKDMATQRIKKQPGCSFV 576
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 102/374 (27%), Positives = 176/374 (47%), Gaps = 49/374 (13%)
Query: 28 LHHSQLF--NTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCA 85
+H +F N + YS + P + LY + + + LP D++++ F+++ CA
Sbjct: 87 IHKPNVFSWNFMFRAYSRSSFPAETIALYNLMLR-----NGTLP---DNYSFPFVLKACA 138
Query: 86 TLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNV 145
LS + G ++H+ K+G V+V AL++ + S G
Sbjct: 139 RLSLLHKGREIHSSTLKLGVHLDVFVQNALISAFSSCG---------------------- 176
Query: 146 MITGLVKWGELEFARSLFEEMPC--RNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYT 203
+E AR++F+ +P R+VVSW +I GY + +R AL +F +++
Sbjct: 177 ---------AVEAARAVFDMLPALVRDVVSWNSMISGYLQSHRYELALKVFWELLGDGSL 227
Query: 204 EPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSAS 263
P E+T+++ L + G + + IHG GF D+ V + LID Y+KCG I A
Sbjct: 228 SPDEVTLVSALSVCGRLGLLDLGKKIHGLFTGSGFV-LDVFVGSSLIDMYSKCGQIEDAR 286
Query: 264 KLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSH 323
K+F+ I +N V WTS+I+G+A + KEA+E F MQ G + T VL+AC H
Sbjct: 287 KVFDRI--PHRNTVCWTSMIAGYAQSDLFKEAIELFREMQIGGFAADAATIACVLSACGH 344
Query: 324 GGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVW 383
G + +G + E + D+ LI M + G +++A + G+ D+ W
Sbjct: 345 WGALAQG-RWIHLYCERNSIEMDLNARNALIGMYSKCGDIQKALEIFHGLTQ--PDIFSW 401
Query: 384 RTLLGACSFHGNVE 397
++ + +G +
Sbjct: 402 SAVISGLAMNGESD 415
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 38/172 (22%), Positives = 72/172 (41%), Gaps = 5/172 (2%)
Query: 260 FSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLN 319
FS + F+ + + N+ SW + ++ E + + M + G P+ +F VL
Sbjct: 79 FSRTLFFQ---IHKPNVFSWNFMFRAYSRSSFPAETIALYNLMLRNGTLPDNYSFPFVLK 135
Query: 320 ACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITD 379
AC+ L+ +G ++ V D+ LI G +E A +P+ + D
Sbjct: 136 ACARLSLLHKGREIHSSTLK-LGVHLDVFVQNALISAFSSCGAVEAARAVFDMLPALVRD 194
Query: 380 VVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFG 431
VV W +++ E+ +V ++L + D V + + L+ GR G
Sbjct: 195 VVSWNSMISGYLQSHRYELALKVFWELLG-DGSLSPDEVTLVSALSVCGRLG 245
>gi|296082436|emb|CBI21441.3| unnamed protein product [Vitis vinifera]
Length = 832
Score = 235 bits (600), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 138/388 (35%), Positives = 216/388 (55%), Gaps = 19/388 (4%)
Query: 71 LFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSK 130
L D + + + R C L +G Q+H + G + + V +L++MY G + +
Sbjct: 460 LPDKYVFPKVFRACGQLLWLEVGIQVHKDVVICGCEFDLQVCNSLIDMYSKSGDVGSGRR 519
Query: 131 LFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEA 190
+FDEM ER++++WN MI+G K ++ A ++FE M +VV+W +I G+ + + A
Sbjct: 520 VFDEMVERDVLSWNSMISGYCK--RIQDALNVFELMDRFDVVTWNAMILGFVDLEMGHLA 577
Query: 191 LALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLI 250
L F KM ++ITI VLPA D+KS + +H Y K F++ I V N LI
Sbjct: 578 LECFSKMQRSGIMN-NQITISTVLPAC----DLKSGKQVHAYITKNSFSSV-IPVWNALI 631
Query: 251 DTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPN 310
Y+KCGCI +A +F ++ ++LVSW ++I GF MHG+G+ A++ M + PN
Sbjct: 632 HMYSKCGCIGTAYSIFSNMI--SRDLVSWNTMIGGFGMHGLGQFALQLLRDMSHSDVCPN 689
Query: 311 RVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQA---- 366
VTF S L+ACSH GLV+EG+ F M + P ++H+ C++D+L RA RLE A
Sbjct: 690 SVTFTSALSACSHSGLVDEGMELFHTMTRDFGFTPGMEHFSCVVDLLARADRLEDAVGFI 749
Query: 367 EKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAG 426
EK L PS+ +W LL AC NV + + ++ ++E + G+YV + NI A
Sbjct: 750 EKMPLK-PSK----HIWSALLAACRAQQNVSVAKLAAEQLFQLEPEHAGNYVTLSNIYAR 804
Query: 427 VGRFGDAERLRRVMDERNAFKVPGCSLV 454
GR+ DA +R++M++R K G S +
Sbjct: 805 AGRWDDAVAVRKLMEDRGLVKPSGYSWI 832
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 128/304 (42%), Gaps = 79/304 (25%)
Query: 125 LKDSSK--LFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYT 182
+K+SS LFD++ + N+ W ++ + G + + EM + V+ D Y
Sbjct: 411 IKNSSAQALFDKLSQPNVFAWTAILGFYSRNGLSDECVRTYSEMKLKGVLP-----DKY- 464
Query: 183 RMNRSNEALALFRKMV-ACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAF 241
+F K+ AC ++ L V + ++ + C+ F
Sbjct: 465 ----------VFPKVFRAC-----GQLLWLEVGIQVHKDVVICGCE-------------F 496
Query: 242 DIRVLNCLIDTYAKCGCIFSASKLFEDIS---------------------------VERK 274
D++V N LID Y+K G + S ++F+++ ++R
Sbjct: 497 DLQVCNSLIDMYSKSGDVGSGRRVFDEMVERDVLSWNSMISGYCKRIQDALNVFELMDRF 556
Query: 275 NLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFF 334
++V+W ++I GF MG A+E F +MQ+ G+ N++T +VL AC ++ G
Sbjct: 557 DVVTWNAMILGFVDLEMGHLALECFSKMQRSGIMNNQITISTVLPACD----LKSGKQVH 612
Query: 335 DKMVEE--CEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEIT--DVVVWRTLLGAC 390
+ + V+P + LI M + G + TA I S + D+V W T++G
Sbjct: 613 AYITKNSFSSVIP---VWNALIHMYSKCGCI----GTAYSIFSNMISRDLVSWNTMIGGF 665
Query: 391 SFHG 394
HG
Sbjct: 666 GMHG 669
>gi|413943789|gb|AFW76438.1| hypothetical protein ZEAMMB73_890738 [Zea mays]
Length = 529
Score = 235 bits (600), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 138/426 (32%), Positives = 227/426 (53%), Gaps = 24/426 (5%)
Query: 45 ESPQKAFLLYKQLQQIYTH---------------SHSPLPPLFDSFTYSFLIRTCATLSH 89
E PQ+ +L+ + + Y S P D T + C+
Sbjct: 106 EMPQRFLVLWNMMMRCYIRCGRFTAAVALAVQMESGGATP---DRVTLVTAVTACSRAGD 162
Query: 90 PNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITG 149
NLG ++H+ + V F + V AL++MY G+L+++ K+F++MPERN+++W ++++G
Sbjct: 163 LNLGRRIHSYMDGV-FGFSLPVANALLDMYTKNGYLEEAVKMFEQMPERNIISWTILVSG 221
Query: 150 LVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEIT 209
G+L+ AR F + ++++ WT +I+ + EAL LFR M + EP + T
Sbjct: 222 YGIAGQLDKARVFFYQCTQKDLILWTSMINACVQHGSFEEALILFRDM-QLQRVEPDKFT 280
Query: 210 ILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDI 269
++ +L G + + IH Y E R D + LI+ Y+KCG + + ++F
Sbjct: 281 VVTLLTCCANIGALDQGEWIHQYAESRNMK-IDAVLGTALIEMYSKCGHVDKSLQIFG-- 337
Query: 270 SVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEE 329
++ K+ +WT+II G A +G +A+E F MQ+ KP+ +TF+ VL+AC HGGLV+E
Sbjct: 338 RMQGKDAAAWTAIICGLATNGQASKALELFEEMQRSKTKPDGITFIGVLSACCHGGLVDE 397
Query: 330 GLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGA 389
G +F M E + P I+HY CL+++LG AG L +AEK +P + ++ LL A
Sbjct: 398 GQRYFQAMKEVYHIEPRIEHYSCLVNLLGHAGLLYEAEKLITDMPVNNDTMPLFGALLTA 457
Query: 390 CSFHGNVEMGERVTRKILEMERGYGGDY-VLMYNILAGVGRFGDAERLRRVMDERNAFKV 448
C +GNVEM E +T++I + + D VLM N+ A R+ +A R+R M K
Sbjct: 458 CKANGNVEMSEWLTKRIAKEDCSPNPDVNVLMSNVYATASRWEEAIRVRSKMTNPAVKKT 517
Query: 449 PGCSLV 454
GCS++
Sbjct: 518 AGCSMI 523
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 89/295 (30%), Positives = 136/295 (46%), Gaps = 41/295 (13%)
Query: 73 DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLF 132
DS+TY F++R T+ G ++HA K GF+ Y +L+ MY LG + ++F
Sbjct: 45 DSYTYPFVLRAIGTMKLSVEGRKVHAAAVKTGFRWDAYTACSLMEMYTMLGRADSARRVF 104
Query: 133 DEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALA 192
DEMP+R LV WN+M M C Y R R A+A
Sbjct: 105 DEMPQRFLVLWNMM-------------------MRC------------YIRCGRFTAAVA 133
Query: 193 LFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDT 252
L +M + T P +T++ + A + GD+ + IH Y + G F + V N L+D
Sbjct: 134 LAVQMESGGAT-PDRVTLVTAVTACSRAGDLNLGRRIHSYMD--GVFGFSLPVANALLDM 190
Query: 253 YAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRV 312
Y K G + A K+FE + +N++SWT ++SG+ + G +A F + + L +
Sbjct: 191 YTKNGYLEEAVKMFEQMP--ERNIISWTILVSGYGIAGQLDKARVFFYQCTQKDL----I 244
Query: 313 TFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAE 367
+ S++NAC G EE L F M + V PD L+ G L+Q E
Sbjct: 245 LWTSMINACVQHGSFEEALILFRDMQLQ-RVEPDKFTVVTLLTCCANIGALDQGE 298
>gi|359491319|ref|XP_002281821.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74400-like [Vitis vinifera]
Length = 482
Score = 235 bits (600), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 148/470 (31%), Positives = 232/470 (49%), Gaps = 78/470 (16%)
Query: 9 TPNNITTQIHSHLLTTNSLLHHSQLFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPL 68
T N +H+HL S N L Y + + K L ++ L +
Sbjct: 20 TNNQPKAHLHTHLKPPKS--------NQTLKRYLQSSNTSKVLLFFRILLRKN------- 64
Query: 69 PPLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDS 128
P DSF+ F ++ C S G Q+HA++ GF+ +++ T+L++MY + G + D
Sbjct: 65 PSSIDSFSLMFALKACTLKSSLVEGKQMHALVINFGFEPIIFLQTSLISMYSATGNVAD- 123
Query: 129 SKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSN 188
A ++F+E+P +N++SWT +I Y R N
Sbjct: 124 ------------------------------AHNMFDEIPSKNLISWTSVISAYVDNQRPN 153
Query: 189 EALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNC 248
+AL LFR+M + +P +T+ L A G + + IH Y RG D+ + N
Sbjct: 154 KALQLFRQM-QMDDVQPDIVTVTVALSACADLGALDMGEWIHAYIRHRGLDT-DLCLNNS 211
Query: 249 LIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLK 308
LI+ Y+KCG I +A +LF+ ++K++ +WTS+I G A+HG +EA++ F M++ +
Sbjct: 212 LINMYSKCGEIGTARRLFD--GTQKKDVTTWTSMIVGHALHGQAEEALQLFTEMKETNKR 269
Query: 309 ----------------PNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGC 352
PN VTF+ VL ACSH GLVEEG F M E+ + P I H+GC
Sbjct: 270 ARKNKRNGEHESSLVLPNDVTFMGVLMACSHAGLVEEGKQHFRSMKEDYSLRPRISHFGC 329
Query: 353 LIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHG--------NVEMGERVTR 404
++D+L RAG L +A + L +P + VVWRTLLGACS G N+++ R
Sbjct: 330 MVDLLCRAGLLTEAYEFILKMPVR-PNAVVWRTLLGACSLQGDSNGNGNSNIKIYSEARR 388
Query: 405 KILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSLV 454
++LE+E + GD V+M N+ A G + +R + +R + PGCS +
Sbjct: 389 QLLELEPSHVGDNVIMSNLYAAKGMWDKKMLVRNQIKQR---RDPGCSSI 435
>gi|356514477|ref|XP_003525932.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Glycine max]
Length = 526
Score = 235 bits (600), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 147/444 (33%), Positives = 237/444 (53%), Gaps = 23/444 (5%)
Query: 17 IHSHLLTTNSLLHHSQLFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFT 76
I HL N+ +H NT++ Y SP A Y + Q +++T
Sbjct: 62 IFRHLTNRNTFMH-----NTMIRGYLQCRSPLHAVSCYLSMLQNGV--------AVNNYT 108
Query: 77 YSFLIRTCATL--SHPN--LGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLF 132
+ LI+ C L S P+ +G +H + K G ++ YV +A + Y + + LF
Sbjct: 109 FPPLIKACIALLPSSPSNIVGRLVHGHVVKFGLRNDPYVVSAFIEFYSVSREVDTARVLF 168
Query: 133 DEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALA 192
DE +++V M+ G K G ++ AR +F++MP RN VSW+ ++ Y+R++ E LA
Sbjct: 169 DETSYKDVVLGTAMVDGYGKMGNVKSAREVFDKMPERNAVSWSAMMAAYSRVSDFKEVLA 228
Query: 193 LFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDT 252
LF +M E TEP+E ++ VL A G + +H Y + + I + L+D
Sbjct: 229 LFTEM-QNEGTEPNESILVTVLTACAHLGALTQGLWVHSYARRFHLESNPI-LATALVDM 286
Query: 253 YAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRV 312
Y+KCGC+ SA +F+ I K+ +W ++ISG A++G ++++ F +M KPN
Sbjct: 287 YSKCGCVESALSVFDCIV--DKDAGAWNAMISGEALNGDAGKSLQLFRQMAASRTKPNET 344
Query: 313 TFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALG 372
TF++VL AC+H +V++GL F++M V+P ++HY C+ID+L RAG +E+AEK
Sbjct: 345 TFVAVLTACTHAKMVQQGLWLFEEMSSVYGVVPRMEHYACVIDLLSRAGMVEEAEKFMEE 404
Query: 373 IPSEIT--DVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRF 430
+T D VW LL AC H N+ +G RV +K+++M G +VL YNI G
Sbjct: 405 KMGGLTAGDANVWGALLNACRIHKNIHVGNRVWKKLVDMGVTDCGTHVLTYNIYREAGWD 464
Query: 431 GDAERLRRVMDERNAFKVPGCSLV 454
+A ++R ++E K PGCS++
Sbjct: 465 VEANKVRSRIEEVGMKKKPGCSII 488
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 65/287 (22%), Positives = 121/287 (42%), Gaps = 44/287 (15%)
Query: 156 LEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMV-----ACEYTEPSEI-T 209
+ARS+F + RN +I GY + A++ + M+ YT P I
Sbjct: 56 FSYARSIFRHLTNRNTFMHNTMIRGYLQCRSPLHAVSCYLSMLQNGVAVNNYTFPPLIKA 115
Query: 210 ILAVLPAIWQNGDVKSCQLIHGYGEKRGF-------TAF--------------------- 241
+A+LP+ N +L+HG+ K G +AF
Sbjct: 116 CIALLPSSPSN---IVGRLVHGHVVKFGLRNDPYVVSAFIEFYSVSREVDTARVLFDETS 172
Query: 242 --DIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENF 299
D+ + ++D Y K G + SA ++F+ + +N VSW+++++ ++ KE + F
Sbjct: 173 YKDVVLGTAMVDGYGKMGNVKSAREVFDKMP--ERNAVSWSAMMAAYSRVSDFKEVLALF 230
Query: 300 GRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGR 359
MQ G +PN ++VL AC+H G + +GL + + + L+DM +
Sbjct: 231 TEMQNEGTEPNESILVTVLTACAHLGALTQGL-WVHSYARRFHLESNPILATALVDMYSK 289
Query: 360 AGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKI 406
G +E A I + D W ++ + +G+ ++ R++
Sbjct: 290 CGCVESALSVFDCIVDK--DAGAWNAMISGEALNGDAGKSLQLFRQM 334
>gi|328774759|gb|AEB39779.1| pentatricopeptide repeat protein 98 [Funaria hygrometrica]
Length = 980
Score = 235 bits (600), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 137/386 (35%), Positives = 222/386 (57%), Gaps = 45/386 (11%)
Query: 73 DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLF 132
DS T++ ++ C + LG + ++I + GF+S +++ ALV+M+V+ G L + LF
Sbjct: 507 DSSTFTSILNVCKSPDALELGKWVQSLIIRAGFESDLHIRNALVSMFVNCGDLMSAMNLF 566
Query: 133 DEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNV----VSWTGIIDGYTRMNRSN 188
++MPER+LV+WN +I G V+ GE +FA F+ M V +++TG+++ S
Sbjct: 567 NDMPERDLVSWNTIIAGFVQHGENQFAFDYFKMMQESGVKPDQITFTGLLNACA----SP 622
Query: 189 EALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNC 248
EAL R++ A IT A+ C ++ G G
Sbjct: 623 EALTEGRRLHAL-------ITEAAL-----------DCDVVVGTG--------------- 649
Query: 249 LIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLK 308
LI Y KCG I A +F ++ +KN+ SWTS+I+G+A HG GKEA+E F +MQ+ G+K
Sbjct: 650 LISMYTKCGSIDDAHLVFHNLP--KKNVYSWTSMITGYAQHGRGKEALELFCQMQQEGVK 707
Query: 309 PNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEK 368
P+ +TF+ L+AC+H GL++EGL+ F+ M ++ + P ++HYGC++D+ GRAG L +A +
Sbjct: 708 PDWITFVGALSACAHAGLIKEGLHHFESM-KDFNIEPRMEHYGCMVDLFGRAGLLHEAVE 766
Query: 369 TALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVG 428
+ + D +W LLGAC H +VE+ E+V +K LE++ G YV++ NI A G
Sbjct: 767 FINKMQVK-PDSRLWGALLGACQVHLDVELAEKVAQKKLELDPNDDGVYVILSNIYAAAG 825
Query: 429 RFGDAERLRRVMDERNAFKVPGCSLV 454
+ + ++R+VM +R K PG S +
Sbjct: 826 MWKEVTKMRKVMLDRGVVKKPGQSWI 851
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 95/356 (26%), Positives = 177/356 (49%), Gaps = 46/356 (12%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+N LL Y ++AF L++Q+ Q + P D +T+ +++ CA + + G
Sbjct: 173 WNLLLGGYVQHRRYEEAFRLHEQMVQ------DGVKP--DKYTFVYMLNACADAKNVDKG 224
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
+L ++I G+ + ++V TAL+NM++ G + D+ K+F+ +
Sbjct: 225 GELFSLILNAGWDTDLFVGTALINMHIKCGGVDDALKVFNNL------------------ 266
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
P R++++WT +I G R + +A LF+ M E +P ++ +++
Sbjct: 267 -------------PRRDLITWTSMITGLARHRQFKQACNLFQVMEE-EGVQPDKVAFVSL 312
Query: 214 LPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVER 273
L A ++ + +H ++ G +I V L+ Y KCG + A ++F V+
Sbjct: 313 LKACNHPEALEQGKRVHARMKEVGLDT-EIYVGTALLSMYTKCGSMEDALEVFN--LVKG 369
Query: 274 KNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNF 333
+N+VSWT++I+GFA HG +EA F +M + G++PNRVTF+S+L ACS +++G
Sbjct: 370 RNVVSWTAMIAGFAQHGRMEEAFLFFNKMIESGIEPNRVTFMSILGACSRPSALKQGRQI 429
Query: 334 FDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGA 389
D++++ + D + L+ M + G L A I + +VV W ++ A
Sbjct: 430 HDRIIKAGYITDD-RVRTALLSMYAKCGSLMDARNVFERISKQ--NVVAWNAMITA 482
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 95/325 (29%), Positives = 151/325 (46%), Gaps = 44/325 (13%)
Query: 73 DSFTYSFLIRTCATLSHPNL---GTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSS 129
D + L++ C +HP G ++HA + +VG + +YV TAL++MY G ++D+
Sbjct: 305 DKVAFVSLLKAC---NHPEALEQGKRVHARMKEVGLDTEIYVGTALLSMYTKCGSMEDAL 361
Query: 130 KLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNE 189
++F+ LVK RNVVSWT +I G+ + R E
Sbjct: 362 EVFN----------------LVKG---------------RNVVSWTAMIAGFAQHGRMEE 390
Query: 190 ALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCL 249
A F KM+ EP+ +T +++L A + +K + IH K G+ D RV L
Sbjct: 391 AFLFFNKMIE-SGIEPNRVTFMSILGACSRPSALKQGRQIHDRIIKAGYIT-DDRVRTAL 448
Query: 250 IDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKP 309
+ YAKCG + A +FE IS ++N+V+W ++I+ + H AV F + K G+KP
Sbjct: 449 LSMYAKCGSLMDARNVFERIS--KQNVVAWNAMITAYVQHEKYDNAVATFQALLKEGIKP 506
Query: 310 NRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKT 369
+ TF S+LN C +E G + ++ D+ L+ M G L A
Sbjct: 507 DSSTFTSILNVCKSPDALELG-KWVQSLIIRAGFESDLHIRNALVSMFVNCGDLMSAMNL 565
Query: 370 ALGIPSEITDVVVWRTLLGACSFHG 394
+P D+V W T++ HG
Sbjct: 566 FNDMPER--DLVSWNTIIAGFVQHG 588
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 94/385 (24%), Positives = 175/385 (45%), Gaps = 50/385 (12%)
Query: 48 QKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQS 107
++AFL + ++ + S + P + T+ ++ C+ S G Q+H I K G+ +
Sbjct: 389 EEAFLFFNKMIE------SGIEP--NRVTFMSILGACSRPSALKQGRQIHDRIIKAGYIT 440
Query: 108 HVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMP 167
V TAL++MY G L D+ +F+ + ++N+V WN MIT
Sbjct: 441 DDRVRTALLSMYAKCGSLMDARNVFERISKQNVVAWNAMIT------------------- 481
Query: 168 CRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQ 227
Y + + + A+A F+ ++ E +P T ++L ++ +
Sbjct: 482 ------------AYVQHEKYDNAVATFQALLK-EGIKPDSSTFTSILNVCKSPDALELGK 528
Query: 228 LIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFA 287
+ + GF + D+ + N L+ + CG + SA LF D+ ++LVSW +II+GF
Sbjct: 529 WVQSLIIRAGFES-DLHIRNALVSMFVNCGDLMSAMNLFNDMP--ERDLVSWNTIIAGFV 585
Query: 288 MHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDI 347
HG + A + F MQ+ G+KP+++TF +LNAC+ + EG ++ E + D+
Sbjct: 586 QHGENQFAFDYFKMMQESGVKPDQITFTGLLNACASPEALTEGRRLH-ALITEAALDCDV 644
Query: 348 KHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKIL 407
LI M + G ++ A +P + +V W +++ + HG G+
Sbjct: 645 VVGTGLISMYTKCGSIDDAHLVFHNLPKK--NVYSWTSMITGYAQHGR---GKEALELFC 699
Query: 408 EMER-GYGGDYVLMYNILAGVGRFG 431
+M++ G D++ L+ G
Sbjct: 700 QMQQEGVKPDWITFVGALSACAHAG 724
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 96/382 (25%), Positives = 181/382 (47%), Gaps = 56/382 (14%)
Query: 106 QSHVYVNTALVNMYVSLGFLKDSSKLFDEMP----ERNLVTWNVMITGLVKWGELEFARS 161
Q H ++L+ + + L D ++ + + + ++ WN++I+ K G A+
Sbjct: 101 QIHRQTYSSLLQLCIKHKNLGDGERIHNHIKFSKIQPDIFMWNMLISMYAKCGNTNSAKQ 160
Query: 162 LFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNG 221
+F+EMP ++V SW ++ GY + R EA L +MV + +P + T + +L A
Sbjct: 161 IFDEMPDKDVYSWNLLLGGYVQHRRYEEAFRLHEQMVQ-DGVKPDKYTFVYMLNACADAK 219
Query: 222 DVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTS 281
+V + G+ D+ V LI+ + KCG + A K+F ++ R++L++WTS
Sbjct: 220 NVDKGGELFSLILNAGWDT-DLFVGTALINMHIKCGGVDDALKVFNNLP--RRDLITWTS 276
Query: 282 IISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVE-- 339
+I+G A H K+A F M++ G++P++V F+S+L AC+H +E+G +M E
Sbjct: 277 MITGLARHRQFKQACNLFQVMEEEGVQPDKVAFVSLLKACNHPEALEQGKRVHARMKEVG 336
Query: 340 ----------------ECEVLPD------------IKHYGCLIDMLGRAGRLEQA----- 366
+C + D + + +I + GR+E+A
Sbjct: 337 LDTEIYVGTALLSMYTKCGSMEDALEVFNLVKGRNVVSWTAMIAGFAQHGRMEEAFLFFN 396
Query: 367 EKTALGI-PSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILA 425
+ GI P+ +T + ++LGACS ++ G ++ +I++ GY D + +L+
Sbjct: 397 KMIESGIEPNRVT----FMSILGACSRPSALKQGRQIHDRIIKA--GYITDDRVRTALLS 450
Query: 426 GVGRFGDAERLRRVMDERNAFK 447
+ G +MD RN F+
Sbjct: 451 MYAKCGS------LMDARNVFE 466
>gi|124360227|gb|ABN08240.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 687
Score = 235 bits (600), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 138/384 (35%), Positives = 215/384 (55%), Gaps = 9/384 (2%)
Query: 73 DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLF 132
+ T S ++ CA L G ++H + G +++V +ALV++Y ++++ +F
Sbjct: 178 NPMTVSSILPACAELKDLKSGKEIHGFAVRHGMVVNLFVCSALVSLYAKCLSVREARMVF 237
Query: 133 DEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNV----VSWTGIIDGYTRMNRSN 188
D MP R++V+WN ++T K E E SLF +M V +W +I G RS
Sbjct: 238 DLMPHRDVVSWNGVLTAYFKNKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCMENGRSE 297
Query: 189 EALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNC 248
EA+ +FRKM + +P+EITI ++LPA + +++ + IH Y R + D+
Sbjct: 298 EAVEMFRKMQKMGF-KPNEITISSILPACSFSENLRMGKEIHCY-VFRHWKVGDLTSTTA 355
Query: 249 LIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLK 308
L+ YAKCG + + +F+ + RK++V+W ++I AMHG GKEA+ F +M ++
Sbjct: 356 LLYMYAKCGDLNLSRNVFD--MMRRKDVVAWNTMIIANAMHGNGKEALFLFDKMLLSRVQ 413
Query: 309 PNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEK 368
PN VTF VL+ CSH LVEEG+ F+ M + V PD HY C++D+ RAGRL +A K
Sbjct: 414 PNSVTFTGVLSGCSHSRLVEEGVQIFNSMGRDHLVEPDANHYSCVVDIYSRAGRLNEAYK 473
Query: 369 TALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVG 428
G+P E T W LL AC + NVE+ + +K+ E+E G+YV ++NIL
Sbjct: 474 FIQGMPMEPT-ASAWGALLAACRVYKNVELAKISAKKLFEIEPNNPGNYVSLFNILVTAK 532
Query: 429 RFGDAERLRRVMDERNAFKVPGCS 452
+ +A ++R +M ER K PGCS
Sbjct: 533 MWSEASQVRILMKERGITKTPGCS 556
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 102/439 (23%), Positives = 177/439 (40%), Gaps = 96/439 (21%)
Query: 9 TPNNITTQIHSHL--------LTTNSLLHHSQLFN-----------TLLHFYSLAESPQK 49
P ++ T I SHL L QLF+ TL+ + +
Sbjct: 2 VPPSLPTNIPSHLGLRLIRVALNVGDFNRARQLFDNIPQPDPTTCSTLISALTTHGLSNE 61
Query: 50 AFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHV 109
A +Y LQ+ P P+F + + CA ++H ++ G S V
Sbjct: 62 AIKIYSSLQE---RGIKPDMPVFLAAA-----KACAVSGDALRVKEVHDDATRCGVMSDV 113
Query: 110 YVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCR 169
+V AL++ Y ++ + ++FD++ R++V+W + + VK G +F EM
Sbjct: 114 FVGNALIHAYGKCKCVEGARRVFDDLVVRDVVSWTSLSSCYVKCGFPRKGMDVFREM--- 170
Query: 170 NVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLI 229
W+G+ +P+ +T+ ++LPA + D+KS + I
Sbjct: 171 ---GWSGV--------------------------KPNPMTVSSILPACAELKDLKSGKEI 201
Query: 230 HGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFE---------------------- 267
HG+ + G ++ V + L+ YAKC + A +F+
Sbjct: 202 HGFAVRHGMVV-NLFVCSALVSLYAKCLSVREARMVFDLMPHRDVVSWNGVLTAYFKNKE 260
Query: 268 ---------DISVE--RKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLS 316
+S + R + +W ++I G +G +EAVE F +MQK+G KPN +T S
Sbjct: 261 YEKGFSLFLKMSRDGVRADEATWNAVIGGCMENGRSEEAVEMFRKMQKMGFKPNEITISS 320
Query: 317 VLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSE 376
+L ACS + G + +V D+ L+ M + G L + + +
Sbjct: 321 ILPACSFSENLRMGKEIHCYVFRHWKV-GDLTSTTALLYMYAKCGDLNLSRNVFDMMRRK 379
Query: 377 ITDVVVWRTLLGACSFHGN 395
DVV W T++ A + HGN
Sbjct: 380 --DVVAWNTMIIANAMHGN 396
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 77/318 (24%), Positives = 138/318 (43%), Gaps = 23/318 (7%)
Query: 73 DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLF 132
+ T S ++ C+ + +G ++H + + + TAL+ MY G L S +F
Sbjct: 314 NEITISSILPACSFSENLRMGKEIHCYVFRHWKVGDLTSTTALLYMYAKCGDLNLSRNVF 373
Query: 133 DEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCR----NVVSWTGIIDGYTRMNRSN 188
D M +++V WN MI G + A LF++M N V++TG++ G +
Sbjct: 374 DMMRRKDVVAWNTMIIANAMHGNGKEALFLFDKMLLSRVQPNSVTFTGVLSGCSHSRLVE 433
Query: 189 EALALFRKMVACEYTEPSEITILAVLPAIWQNGDV-KSCQLIHGYGEKRGFTAFDIRVLN 247
E + +F M EP V+ + G + ++ + I G + +A+ +
Sbjct: 434 EGVQIFNSMGRDHLVEPDANHYSCVVDIYSRAGRLNEAYKFIQGMPMEPTASAWGALLAA 493
Query: 248 CLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGL 307
C + + I SA KLFE +E N ++ S+ + M EA + M++ G+
Sbjct: 494 CRVYKNVELAKI-SAKKLFE---IEPNNPGNYVSLFNILVTAKMWSEASQVRILMKERGI 549
Query: 308 -KPNRVTFLSVLNACSHGGLV--------EEGLNFFDKMVEECEVL---PDIKHYGCLID 355
K ++L V N H +V ++ NF D++VE+ ++ PD + ID
Sbjct: 550 TKTPGCSWLQVGNKV-HTFVVGDKSNIESDKIYNFLDELVEKMKMAGYKPDTDYVLQDID 608
Query: 356 MLGRAGRL-EQAEKTALG 372
+A L +EK A+
Sbjct: 609 QEEKAESLCNHSEKLAVA 626
>gi|357113684|ref|XP_003558631.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Brachypodium distachyon]
Length = 802
Score = 235 bits (600), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 128/396 (32%), Positives = 224/396 (56%), Gaps = 18/396 (4%)
Query: 64 SHSPLPPLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLG 123
S+S + P D FT + ++ CA L ++G Q+HA I + V AL++MY G
Sbjct: 287 SYSTMAP--DEFTITSVLSACANLGMVSIGKQVHAYILRSRMPYIGQVTNALISMYAKSG 344
Query: 124 FLKDSSKLFDE--MPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGY 181
++++ + + M + N++++ ++ G VK G+++ AR +F+ M R+VV+WT +I GY
Sbjct: 345 SVENARGVMQQAVMADLNVISFTALLEGYVKLGDMKHAREMFDVMSNRDVVAWTAMIVGY 404
Query: 182 TRMNRSNEALALFRKMVACEYTEPSEITILAVLP-----AIWQNGDVKSCQLIHGYGEKR 236
+ ++EA+ LFR M+ EP+ T+ AVL A + G C+ I E+
Sbjct: 405 EQNGHNDEAMELFRLMIRSG-PEPNSYTVAAVLSVCASLACLEYGKQIHCKAIRSLQEQS 463
Query: 237 GFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAV 296
V N ++ YA+ G + A ++F+ + RK V+WTS+I A HG+G++AV
Sbjct: 464 S------SVSNSIVTMYARSGSLPWARRVFDRVHW-RKETVTWTSMIVALAQHGLGEDAV 516
Query: 297 ENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDM 356
F M +VG+KP+R+TF+ VL+AC+H G V+EG +F ++ ++ ++P++ HY C++D+
Sbjct: 517 GLFEEMLRVGVKPDRITFVGVLSACTHVGFVDEGKRYFQQLQDKHGIVPEMSHYACMVDL 576
Query: 357 LGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGD 416
L RAG +A++ +P E D + W +LL AC H N ++ E K+L ++ G G
Sbjct: 577 LARAGLFSEAQEFIQQMPVE-PDAIAWGSLLSACRVHKNADLAELAAEKLLSIDPGNSGA 635
Query: 417 YVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCS 452
Y + N+ + GR+ DA ++ + +++ K G S
Sbjct: 636 YSALSNVYSACGRWNDAAKIWKRRKDKSVKKETGFS 671
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 106/396 (26%), Positives = 182/396 (45%), Gaps = 38/396 (9%)
Query: 75 FTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDE 134
FT + ++ +CA +G ++H+ + K+G S V V +++NMY G + + +F+
Sbjct: 163 FTLTNVLSSCAATEARGVGRKVHSFVVKLGLSSCVPVANSVLNMYGKCGDAETARAVFER 222
Query: 135 MPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALF 194
MPER++ +WN M++ G ++ A SLFE MP R +VSW +I GY + + +AL F
Sbjct: 223 MPERSVSSWNAMVSLDAHLGRMDLALSLFENMPDRTIVSWNAVIAGYNQNGLNAKALWFF 282
Query: 195 RKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYA 254
+M++ P E TI +VL A G V + +H Y R + +V N LI YA
Sbjct: 283 SRMLSYSTMAPDEFTITSVLSACANLGMVSIGKQVHAY-ILRSRMPYIGQVTNALISMYA 341
Query: 255 KCGCIFSASKLFE-----DISV--------------------------ERKNLVSWTSII 283
K G + +A + + D++V +++V+WT++I
Sbjct: 342 KSGSVENARGVMQQAVMADLNVISFTALLEGYVKLGDMKHAREMFDVMSNRDVVAWTAMI 401
Query: 284 SGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEV 343
G+ +G EA+E F M + G +PN T +VL+ C+ +E G K + +
Sbjct: 402 VGYEQNGHNDEAMELFRLMIRSGPEPNSYTVAAVLSVCASLACLEYGKQIHCKAIRSLQE 461
Query: 344 LPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVT 403
++ M R+G L A + + + V W +++ A + HG +GE
Sbjct: 462 QSS-SVSNSIVTMYARSGSLPWARRVFDRVHWR-KETVTWTSMIVALAQHG---LGEDAV 516
Query: 404 RKILEMER-GYGGDYVLMYNILAGVGRFGDAERLRR 438
EM R G D + +L+ G + +R
Sbjct: 517 GLFEEMLRVGVKPDRITFVGVLSACTHVGFVDEGKR 552
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 92/346 (26%), Positives = 164/346 (47%), Gaps = 45/346 (13%)
Query: 63 HSHSP---LPPLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMY 119
H+ +P + DS + L++ C T ++P G +HA K G + Y+ L++ Y
Sbjct: 9 HAGAPRTAMAAASDSDHCARLLQRCQTAANPGAGRAIHARAVKAGLLASAYLCNNLLSYY 68
Query: 120 VSLGF-----LKDSSKLFDEMP--ERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVV 172
+++ +LFDE+P +RN+ TWN +++ K G L AR++F EMP R+ V
Sbjct: 69 AGPAAGGGGGFREARRLFDEIPAAQRNVFTWNSLLSLYAKSGRLADARAVFAEMPERDPV 128
Query: 173 SWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGY 232
SWT ++ G R+ R EA+ +F MV + P++ T+ VL + + +H +
Sbjct: 129 SWTVMVVGLNRVGRFGEAIKMFLDMVT-DGLSPTQFTLTNVLSSCAATEARGVGRKVHSF 187
Query: 233 GEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDI----------------------- 269
K G ++ + V N +++ Y KCG +A +FE +
Sbjct: 188 VVKLGLSSC-VPVANSVLNMYGKCGDAETARAVFERMPERSVSSWNAMVSLDAHLGRMDL 246
Query: 270 ------SVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVG-LKPNRVTFLSVLNACS 322
++ + +VSW ++I+G+ +G+ +A+ F RM + P+ T SVL+AC+
Sbjct: 247 ALSLFENMPDRTIVSWNAVIAGYNQNGLNAKALWFFSRMLSYSTMAPDEFTITSVLSACA 306
Query: 323 HGGLVEEGLNFFDKMVEECEVLPDIKHY-GCLIDMLGRAGRLEQAE 367
+ G+V G ++ +P I LI M ++G +E A
Sbjct: 307 NLGMVSIGKQVHAYILR--SRMPYIGQVTNALISMYAKSGSVENAR 350
>gi|242047514|ref|XP_002461503.1| hypothetical protein SORBIDRAFT_02g003670 [Sorghum bicolor]
gi|241924880|gb|EER98024.1| hypothetical protein SORBIDRAFT_02g003670 [Sorghum bicolor]
Length = 786
Score = 235 bits (600), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 127/366 (34%), Positives = 214/366 (58%), Gaps = 10/366 (2%)
Query: 92 LGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMP-ERNLVTWNVMITGL 150
+G +HA+ K G +YV AL++ Y G + K+FDE+P R++VTWN ++ G
Sbjct: 148 MGAHVHALAVKAGAAGDLYVRNALIHFYGVCGDVAAMRKVFDELPLVRDVVTWNAVLAGY 207
Query: 151 VKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITI 210
V+ G + AR +F+ MP R+ VSW+ ++ GY + AL +F+ MV + + +E I
Sbjct: 208 VRAGMVGVAREVFDGMPMRDEVSWSTVVGGYVKEGELEVALGVFKNMV-VQGVKANEAAI 266
Query: 211 LAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDIS 270
+ L A Q G ++ + +H KR A + + L+D Y+KCG + +A ++F+ +
Sbjct: 267 VTALSAAAQLGLLEQGKFVHEV-IKRAGVAMSMNLGAALVDMYSKCGSVAAAKEVFD--A 323
Query: 271 VERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEG 330
+ +++ +W S+I G A HG+G +AV+ F + G P +TF+ VLNACS GLV+EG
Sbjct: 324 MPWRDVFAWNSMICGLATHGLGHDAVQLFEKFVSEGFCPTNITFVGVLNACSRTGLVDEG 383
Query: 331 LNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALG--IPSEITDVVVWRTLLG 388
+F M E+ + +++HYGC++D+L RAG +++A + G IP D V+W T+L
Sbjct: 384 RWYFKLMAEKYGIESEMEHYGCMVDLLSRAGLVQEAIELIEGMHIP---PDPVLWGTVLS 440
Query: 389 ACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKV 448
AC HG V++G V K++E++ + G YVL+ +I A ++ + ++R++M R K
Sbjct: 441 ACKRHGLVDLGITVGNKLIELDPAHDGYYVLLASIYAKAKKWDEVRKVRKLMSNRGTSKS 500
Query: 449 PGCSLV 454
G SL+
Sbjct: 501 AGWSLM 506
>gi|224124578|ref|XP_002330058.1| predicted protein [Populus trichocarpa]
gi|222871483|gb|EEF08614.1| predicted protein [Populus trichocarpa]
Length = 568
Score = 235 bits (599), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 135/386 (34%), Positives = 207/386 (53%), Gaps = 49/386 (12%)
Query: 113 TALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFE-------- 164
TA++ YV G ++++ LF MPERN+V+W VM+ GL++ G ++ AR LF+
Sbjct: 60 TAMIRGYVQEGLIEEAELLFWRMPERNVVSWTVMLGGLIEDGRVDEARQLFDMMPVKDVV 119
Query: 165 -----------------------EMPCRNVVSWTGIIDG-------------YTRMNRSN 188
EMP RNVV+WT +I G Y R
Sbjct: 120 ASTNMIDGLCSEGRLIEAREIFDEMPQRNVVAWTSMISGEKDDGTWSTMIKIYERKGFEL 179
Query: 189 EALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNC 248
EALALF ++ E PS ++++VL + + +H + F DI V +
Sbjct: 180 EALALF-SLMQREGVRPSFPSVISVLSVCGSLASLDHGRQVHSQLVRSQFD-IDIYVSSV 237
Query: 249 LIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLK 308
LI Y KCG + +A ++F+ S K++V W SII+G+A HG G++A+E F M +
Sbjct: 238 LITMYIKCGDLVTAKRVFDRFS--SKDIVMWNSIIAGYAQHGFGEKALEVFHDMFSSSIA 295
Query: 309 PNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEK 368
P+ +TF+ VL+ACS+ G V+EGL F+ M + +V P +HY C++D+LGRAG+L +A
Sbjct: 296 PDEITFIGVLSACSYTGKVKEGLEIFESMKSKYQVDPKTEHYACMVDLLGRAGKLNEAMN 355
Query: 369 TALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVG 428
+P E D +VW LLGAC H N+++ E +K+L++E G Y+L+ N+ +
Sbjct: 356 LIENMPVE-ADAIVWGALLGACRTHKNLDLAEIAAKKLLQLEPNNAGPYILLSNLYSSQS 414
Query: 429 RFGDAERLRRVMDERNAFKVPGCSLV 454
R+ D LR+ M +N K PGCS +
Sbjct: 415 RWKDVVELRKTMRAKNLRKSPGCSWI 440
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 142/282 (50%), Gaps = 28/282 (9%)
Query: 126 KDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMN 185
+++ KLFD+MPE N ++WN +++G V+ G + AR +F++MP RNVVSWT +I GY +
Sbjct: 11 REARKLFDKMPETNTISWNGLVSGYVQNGMISEARKVFDKMPERNVVSWTAMIRGYVQEG 70
Query: 186 RSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRV 245
EA LF +M E + ++ +L + ++G V + + D+
Sbjct: 71 LIEEAELLFWRM-----PERNVVSWTVMLGGLIEDGRVDEARQLFDM-----MPVKDVVA 120
Query: 246 LNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISG-------------FAMHGMG 292
+ID G + A ++F+++ ++N+V+WTS+ISG + G
Sbjct: 121 STNMIDGLCSEGRLIEAREIFDEMP--QRNVVAWTSMISGEKDDGTWSTMIKIYERKGFE 178
Query: 293 KEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGC 352
EA+ F MQ+ G++P+ + +SVL+ C ++ G ++V + DI
Sbjct: 179 LEALALFSLMQREGVRPSFPSVISVLSVCGSLASLDHGRQVHSQLV-RSQFDIDIYVSSV 237
Query: 353 LIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHG 394
LI M + G L A++ S+ D+V+W +++ + HG
Sbjct: 238 LITMYIKCGDLVTAKRVFDRFSSK--DIVMWNSIIAGYAQHG 277
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 104/256 (40%), Gaps = 41/256 (16%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
++T++ Y +A L+ +Q+ + P F S ++ C +L+ + G
Sbjct: 165 WSTMIKIYERKGFELEALALFSLMQR------EGVRPSFPSVIS--VLSVCGSLASLDHG 216
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
Q+H+ + + F +YV++ L+ MY+ G L + ++FD +++V WN +I G +
Sbjct: 217 RQVHSQLVRSQFDIDIYVSSVLITMYIKCGDLVTAKRVFDRFSSKDIVMWNSIIAGYAQH 276
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
G E A +F +M F +A P EIT + V
Sbjct: 277 GFGEKALEVFHDM---------------------------FSSSIA-----PDEITFIGV 304
Query: 214 LPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVER 273
L A G VK I + + C++D + G + A L E++ VE
Sbjct: 305 LSACSYTGKVKEGLEIFESMKSKYQVDPKTEHYACMVDLLGRAGKLNEAMNLIENMPVEA 364
Query: 274 KNLVSWTSIISGFAMH 289
+V W +++ H
Sbjct: 365 DAIV-WGALLGACRTH 379
>gi|297736528|emb|CBI25399.3| unnamed protein product [Vitis vinifera]
Length = 846
Score = 235 bits (599), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 150/422 (35%), Positives = 220/422 (52%), Gaps = 45/422 (10%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+N ++ YS + Q+A LY Q+ Q S D +TY + A G
Sbjct: 339 WNAMISGYSQSGCSQEALELYVQMCQNGITS--------DLYTYCSVFNAIAASKSLQFG 390
Query: 94 TQLHAVISKVGFQSHVY-VNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVK 152
+H ++ K G V VN A+ + Y GFL+D
Sbjct: 391 RVVHGMVLKCGLDLMVVSVNNAIADAYSKCGFLED------------------------- 425
Query: 153 WGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILA 212
R +F+ M R++VSWT ++ Y++ + EALA F M E P++ T +
Sbjct: 426 ------VRKVFDRMEERDIVSWTTLVTAYSQSSLGEEALATFCLMRE-EGFAPNQFTFSS 478
Query: 213 VLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVE 272
VL + ++ + +HG K G + + + LID YAKCG I A K+F+ IS
Sbjct: 479 VLISCASLCFLEYGRQVHGLLCKAGLDT-EKCIESALIDMYAKCGSITEAGKVFDKIS-- 535
Query: 273 RKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLN 332
++VSWT+IISG+A HG+ ++A++ F RM+ G+K N VT L VL ACSHGG+VEEGL
Sbjct: 536 NPDIVSWTAIISGYAQHGLVEDALQLFRRMELSGIKANAVTLLCVLFACSHGGMVEEGLF 595
Query: 333 FFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSF 392
+F +M + V+P+++HY C+ID+LGR GRL+ A + +P E + +VW+TLLG C
Sbjct: 596 YFQQMEDGYGVVPEMEHYACIIDLLGRVGRLDDAMEFIRKMPMEPNE-MVWQTLLGGCRV 654
Query: 393 HGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCS 452
HGNVE+GE RKIL + Y YVL+ N G + D LR VM ++ K PG S
Sbjct: 655 HGNVELGEIAARKILSIRPEYSATYVLLSNTYIETGSYEDGLSLRNVMKDQGVKKEPGYS 714
Query: 453 LV 454
+
Sbjct: 715 WI 716
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 93/324 (28%), Positives = 148/324 (45%), Gaps = 41/324 (12%)
Query: 71 LFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSK 130
L D F YS +I++C L LG +HA I GF +H++V+T+L+NMY LG ++DS
Sbjct: 164 LPDKFAYSAIIQSCIGLDSLELGKMVHAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYW 223
Query: 131 LFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEA 190
+F+ M E N V SW +I G T EA
Sbjct: 224 VFNMMTEHNQV-------------------------------SWNAMISGCTSNGLHLEA 252
Query: 191 LALFRKMV--ACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNC 248
LF +M AC P+ T+++V A+ + DV + + + G ++ V
Sbjct: 253 FDLFVRMKNGACT---PNMYTLVSVSKAVGKLVDVNMGKEVQNCASELGIEG-NVLVGTA 308
Query: 249 LIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLK 308
LID Y+KCG + A +F+ + W ++ISG++ G +EA+E + +M + G+
Sbjct: 309 LIDMYSKCGSLHDARSVFDTNFINCGVNTPWNAMISGYSQSGCSQEALELYVQMCQNGIT 368
Query: 309 PNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEV-LPDIKHYGCLIDMLGRAGRLEQAE 367
+ T+ SV NA + ++ G MV +C + L + + D + G LE
Sbjct: 369 SDLYTYCSVFNAIAASKSLQFG-RVVHGMVLKCGLDLMVVSVNNAIADAYSKCGFLEDVR 427
Query: 368 KTALGIPSEITDVVVWRTLLGACS 391
K + E D+V W TL+ A S
Sbjct: 428 KVFDRM--EERDIVSWTTLVTAYS 449
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 101/219 (46%), Gaps = 13/219 (5%)
Query: 152 KWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITIL 211
K E A +F+EMP RNV SWT +I G T + F +M+ P +
Sbjct: 113 KCSEFRAACGVFDEMPQRNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGIL-PDKFAYS 171
Query: 212 AVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISV 271
A++ + ++ +++H RGF A I V L++ YAK G I + +F ++
Sbjct: 172 AIIQSCIGLDSLELGKMVHAQIVMRGF-ATHIFVSTSLLNMYAKLGSIEDSYWVFNMMT- 229
Query: 272 ERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGL 331
N VSW ++ISG +G+ EA + F RM+ PN T +SV A G LV+ +
Sbjct: 230 -EHNQVSWNAMISGCTSNGLHLEAFDLFVRMKNGACTPNMYTLVSVSKAV--GKLVDVNM 286
Query: 332 NFFDKMVEECE----VLPDIKHYGCLIDMLGRAGRLEQA 366
K V+ C + ++ LIDM + G L A
Sbjct: 287 G---KEVQNCASELGIEGNVLVGTALIDMYSKCGSLHDA 322
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 90/198 (45%), Gaps = 14/198 (7%)
Query: 202 YTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVL-NCLIDTYAKCGCIF 260
Y + ++ VL + G ++ + +HG K F D+ VL N Y+KC
Sbjct: 59 YQQTQVQDLIDVLRDCAEKGSIREAKAVHGLVLKSNFEDKDLMVLFNHAAHVYSKCSEFR 118
Query: 261 SASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNA 320
+A +F+++ ++N+ SWT +I G HG+ + + F M G+ P++ + +++ +
Sbjct: 119 AACGVFDEMP--QRNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGILPDKFAYSAIIQS 176
Query: 321 CSHGGLVEEGLNFFDKMVEECEVLPDIKHY----GCLIDMLGRAGRLEQAEKTALGIPSE 376
C +E G KMV V+ + L++M + G +E + + +E
Sbjct: 177 CIGLDSLELG-----KMVHAQIVMRGFATHIFVSTSLLNMYAKLGSIEDS-YWVFNMMTE 230
Query: 377 ITDVVVWRTLLGACSFHG 394
+ V W ++ C+ +G
Sbjct: 231 -HNQVSWNAMISGCTSNG 247
>gi|357462829|ref|XP_003601696.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355490744|gb|AES71947.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 616
Score = 235 bits (599), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 142/421 (33%), Positives = 221/421 (52%), Gaps = 14/421 (3%)
Query: 36 TLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLS--HPNLG 93
T+L +L+ P KAF + + H L P D F +S LI+ CA L H LG
Sbjct: 79 TVLSACNLSNLPHKAFSISLPIL------HEGLQP--DHFVFSSLIKACANLGSVHVKLG 130
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
QLHA F V ++LV+MY +FD + E + ++W MI+G +
Sbjct: 131 KQLHARFLLSPFFEDDVVKSSLVDMYAKFELPDYGRAVFDSIFELSSISWTAMISGYARS 190
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
G A LF E P +N+ +WT +I G + +N+AL LF +M + + + +V
Sbjct: 191 GRKLEALELFRESPFKNLYAWTALISGLVQSGNANDALYLFVEMRREGVSIADPLVLSSV 250
Query: 214 LPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVER 273
+ A + + + +H G+ + + + N L+D YAKC + +A +F + R
Sbjct: 251 VGACANSAVRELGKQVHCVVITLGYESC-LFISNALVDMYAKCSDVVAAKYIF--CEMRR 307
Query: 274 KNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNF 333
K++VSWTSII G A HG+ +EA+ + M G+KPN VTF+ ++ ACSH GLV +G
Sbjct: 308 KDVVSWTSIIVGTAQHGLAEEALTLYDDMVLAGVKPNEVTFVGLIYACSHVGLVSKGRAL 367
Query: 334 FDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFH 393
F MVE+ + P ++HY CL+D+ R+G L++AE +P + D W LL AC H
Sbjct: 368 FKSMVEDFGIRPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVK-PDEPTWAALLSACKHH 426
Query: 394 GNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCSL 453
GN +M R+ +L+++ Y+L+ NI AG G + + +R++M + KVPG S
Sbjct: 427 GNTKMAVRIADHLLDLKPEDPSSYILLSNIYAGAGMWENVSMVRKLMAVKEVKKVPGYSC 486
Query: 454 V 454
V
Sbjct: 487 V 487
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 74/346 (21%), Positives = 132/346 (38%), Gaps = 78/346 (22%)
Query: 89 HPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMIT 148
+P + +LHA I K G H L++ Y G LKD+ KLF
Sbjct: 23 NPFIAKKLHAQIIKSGLNHHHPFPKTLIDAYGKCGLLKDALKLF---------------- 66
Query: 149 GLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEI 208
+ +P ++ V+W ++ N ++A ++ ++ E +P
Sbjct: 67 ---------------DALPQQDHVAWATVLSACNLSNLPHKAFSISLPILH-EGLQPDHF 110
Query: 209 TILAVLPAIWQNG----------------------DVKSCQLIHGYGE----KRGFTAFD 242
+++ A G DV L+ Y + G FD
Sbjct: 111 VFSSLIKACANLGSVHVKLGKQLHARFLLSPFFEDDVVKSSLVDMYAKFELPDYGRAVFD 170
Query: 243 -IRVLN-----CLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAV 296
I L+ +I YA+ G A +LF + KNL +WT++ISG G +A+
Sbjct: 171 SIFELSSISWTAMISGYARSGRKLEALELFRESPF--KNLYAWTALISGLVQSGNANDAL 228
Query: 297 ENFGRMQKVGLK-PNRVTFLSVLNACSHGGLVEEGLNFFDKMV----EECEVLPDIKHYG 351
F M++ G+ + + SV+ AC++ + E G ++ E C + +
Sbjct: 229 YLFVEMRREGVSIADPLVLSSVVGACANSAVRELGKQVHCVVITLGYESCLFISN----- 283
Query: 352 CLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVE 397
L+DM + + A+ + + DVV W +++ + HG E
Sbjct: 284 ALVDMYAKCSDVVAAKYIFCEMRRK--DVVSWTSIIVGTAQHGLAE 327
>gi|357153075|ref|XP_003576330.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g18840-like [Brachypodium distachyon]
Length = 535
Score = 235 bits (599), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 133/386 (34%), Positives = 215/386 (55%), Gaps = 39/386 (10%)
Query: 93 GTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITG--- 149
G +LH + K+G + YV ALV+MY LG L D+ K+FD MP RN V+WN ++
Sbjct: 144 GMELHGCVLKLGCGADRYVQNALVSMYGKLGRLGDARKVFDGMPARNAVSWNALVAAHGD 203
Query: 150 -----------------LVKW-----------GELEFARSLFEEMPCRNVVSWTGIIDGY 181
V W G++E A +F EMP R+ VSW +I Y
Sbjct: 204 VGDSRGAERVSQEMPERSVSWWNAEITRHARVGDMEAAARVFREMPGRDAVSWNSLIGSY 263
Query: 182 TRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAF 241
++ + AL +FR+M EP+E+T+++VL A + G+++ + +HGY +G A
Sbjct: 264 AKLGQCARALKVFREMQD-SGVEPTELTLVSVLGACTEIGELELGKGVHGYLSSKGVLA- 321
Query: 242 DIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGR 301
D V N L+D YAKCG + A ++FE +S +++ W ++I G ++HG +EA+E F
Sbjct: 322 DGYVGNALVDMYAKCGSLELARQVFESMST--RDITCWNAMIVGLSVHGYSREALELFNV 379
Query: 302 MQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAG 361
M+ ++P+ VTFL VL CSH GLV+EG F M E+ +++P +KHYGC++DML R G
Sbjct: 380 MR---VEPDHVTFLGVLIVCSHSGLVDEGRVXFRSMTEDYKIVPGVKHYGCMVDMLCRCG 436
Query: 362 RLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMY 421
++ +A + +P + + V+W+ +L AC HG++ + ++ ++ GD ++M
Sbjct: 437 KVAEAYQMLNYMPLK-ANSVLWKMVLAACRLHGHIHHANKAFHELHQLMPIDDGDVIMMS 495
Query: 422 NILAGVGRFGDAERLRRVMDERNAFK 447
+I A R+ D E LR + E + +K
Sbjct: 496 SIYAEGKRWDDVEHLRTKVIEPSFWK 521
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/272 (22%), Positives = 112/272 (41%), Gaps = 44/272 (16%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+N+L+ Y+ +A +++++Q S + P T ++ C + LG
Sbjct: 256 WNSLIGSYAKLGQCARALKVFREMQD------SGVEP--TELTLVSVLGACTEIGELELG 307
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
+H +S G + YV ALV+MY G L+ + ++F+ M R++ WN MI GL
Sbjct: 308 KGVHGYLSSKGVLADGYVGNALVDMYAKCGSLELARQVFESMSTRDITCWNAMIVGLS-- 365
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
+ GY+R EAL LF M EP +T L V
Sbjct: 366 ------------------------VHGYSR-----EALELFNVM----RVEPDHVTFLGV 392
Query: 214 LPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVER 273
L +G V ++ + ++ C++D +CG + A ++ + + +
Sbjct: 393 LIVCSHSGLVDEGRVXFRSMTEDYKIVPGVKHYGCMVDMLCRCGKVAEAYQMLNYMPL-K 451
Query: 274 KNLVSWTSIISGFAMHGMGKEAVENFGRMQKV 305
N V W +++ +HG A + F + ++
Sbjct: 452 ANSVLWKMVLAACRLHGHIHHANKAFHELHQL 483
>gi|413944077|gb|AFW76726.1| hypothetical protein ZEAMMB73_427029 [Zea mays]
Length = 646
Score = 235 bits (599), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 130/363 (35%), Positives = 203/363 (55%), Gaps = 4/363 (1%)
Query: 92 LGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLV 151
LG +H I + G + V + ALV+M+ G + + ++FD MP +++ +W M++
Sbjct: 251 LGRTVHQCIVESGGRMSVNLENALVDMFGKCGCVAAAKEVFDGMPIKDVYSWTSMVSAYA 310
Query: 152 KWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITIL 211
K G+LE A LF+E+P RNVVSW+ ++ Y+ N +EA+ +F M+A EP + T++
Sbjct: 311 KCGDLENAAKLFKEIPNRNVVSWSCMVAAYSHANMPDEAIRIFNDMIAAG-VEPIDATLV 369
Query: 212 AVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISV 271
+VL A Q + ++ + N ID +AKCG + +AS+LF ++
Sbjct: 370 SVLSACAQLCSLDVGTWLYDTYIVSHKVELTPNLSNAFIDMFAKCGDVGAASRLFSNM-- 427
Query: 272 ERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGL 331
E KN+VSW ++I +HG +EA+ F + G+ P+ T++ VL+ACSHGGLV EG
Sbjct: 428 EDKNVVSWNTMIMAHGLHGQPEEALHLFQEFKGNGILPDEATYIGVLSACSHGGLVSEGR 487
Query: 332 NFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACS 391
F +M + P +HY C+ID+LG+ G L++A + A +P D W LL AC
Sbjct: 488 CHFKEMKIVYGIEPRAEHYACMIDLLGKVGLLQEAFEVARSMPVG-ADEAGWGALLNACR 546
Query: 392 FHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGC 451
HGNVE+G+ K+ ++ G YVLM I A ++G + LR VM +R K PGC
Sbjct: 547 MHGNVEIGKCAADKLAGLDPSDSGIYVLMSQIYASKSKWGQVKMLRTVMRDRRVKKNPGC 606
Query: 452 SLV 454
S +
Sbjct: 607 SSI 609
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 100/400 (25%), Positives = 174/400 (43%), Gaps = 78/400 (19%)
Query: 30 HSQLFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSH 89
++ + T++ + A P A L++++ + D+ T F ++ AT S
Sbjct: 96 NAYMLATMMRGFLRAGKPTHALTLFRRVLRDRL--------AVDARTIVFAVKAAATSSS 147
Query: 90 PNLGTQLHAVISKVGFQSH-VYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMIT 148
P +H V K GF V ALV+MY S L D+ KLFDEM +R++V+W +
Sbjct: 148 PT--EAIHCVAFKRGFIGQSVLAGNALVHMYTSSMLLPDARKLFDEMADRDVVSWTTL-- 203
Query: 149 GLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEI 208
IDGY R +EA +F +MV E P+E+
Sbjct: 204 -----------------------------IDGYARGGLPDEAWRVFCRMVVAESVWPNEV 234
Query: 209 TILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFED 268
T++A A Q G + + +H + G + + N L+D + KCGC+ +A ++F+
Sbjct: 235 TLVAAASAAGQMGLLGLGRTVHQCIVESG-GRMSVNLENALVDMFGKCGCVAAAKEVFDG 293
Query: 269 ISVE-----------------------------RKNLVSWTSIISGFAMHGMGKEAVENF 299
+ ++ +N+VSW+ +++ ++ M EA+ F
Sbjct: 294 MPIKDVYSWTSMVSAYAKCGDLENAAKLFKEIPNRNVVSWSCMVAAYSHANMPDEAIRIF 353
Query: 300 GRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMV--EECEVLPDIKHYGCLIDML 357
M G++P T +SVL+AC+ ++ G +D + + E+ P++ + IDM
Sbjct: 354 NDMIAAGVEPIDATLVSVLSACAQLCSLDVGTWLYDTYIVSHKVELTPNLSN--AFIDMF 411
Query: 358 GRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVE 397
+ G + A + L E +VV W T++ A HG E
Sbjct: 412 AKCGDVGAASR--LFSNMEDKNVVSWNTMIMAHGLHGQPE 449
>gi|347954516|gb|AEP33758.1| organelle transcript processing 82, partial [Barbarea verna]
Length = 710
Score = 235 bits (599), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 141/424 (33%), Positives = 234/424 (55%), Gaps = 48/424 (11%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+N ++ Y+ + ++A L+K++ + + + P D T ++ CA LG
Sbjct: 203 WNAIISGYADTGNNKEALDLFKEMMK------TNVKP--DESTMVTVVSACAQSGSIQLG 254
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
Q+H+ I G S++ + AL+++Y K
Sbjct: 255 RQVHSWIDDHGLGSNLKIVNALIDLYS-------------------------------KC 283
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
GE+E A LF+ + ++V+SW +I GYT +N EAL LF++M+ P+++T+L++
Sbjct: 284 GEVETACGLFQGLSNKDVISWNTMIGGYTHLNLYKEALLLFQEMLRSG-ENPNDVTMLSI 342
Query: 214 LPAIWQNGDVKSCQLIHGYGEKR--GFT-AFDIRVLNCLIDTYAKCGCIFSASKLFEDIS 270
LPA Q G + + IH Y +KR G T A +R LID YAKCG I +A ++F S
Sbjct: 343 LPACAQLGAIDFGRWIHVYIDKRIKGVTNASSLRT--SLIDMYAKCGDIEAAHQVFN--S 398
Query: 271 VERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEG 330
+ + L + ++I GFAMHG A + F RM+K G++P+ +TF+ +L+ACSH G+++ G
Sbjct: 399 MHHRTLSACNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLG 458
Query: 331 LNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGAC 390
F M + ++ P ++HYGC+ID+LG G ++AE+ + E D V+W +LL AC
Sbjct: 459 RRIFRSMTQNYKITPKLEHYGCMIDLLGHLGLFKEAEEMINTMTME-PDGVIWCSLLKAC 517
Query: 391 SFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPG 450
HGNVE+GE +K++++E G YVL+ NI A GR+ + +R +++++ KVPG
Sbjct: 518 KMHGNVELGESFAQKLIKIEPENPGSYVLLSNIYATAGRWNEVANIRALLNDKGMKKVPG 577
Query: 451 CSLV 454
CS +
Sbjct: 578 CSSI 581
Score = 204 bits (520), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 136/450 (30%), Positives = 232/450 (51%), Gaps = 60/450 (13%)
Query: 33 LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNL 92
++NT+ ++L+ P A LY + S LP +S+T+ FL+++CA L
Sbjct: 70 IWNTMFRGHALSSDPVSAIKLY-----VCMISLGLLP---NSYTFPFLLKSCAKLKVSKE 121
Query: 93 GTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVK 152
G Q+H + K+G++ +YV+T+L++MYV G KD+ K+FD R++V++ +ITG
Sbjct: 122 GQQIHGHVLKLGYELDLYVHTSLISMYVKNGRWKDAHKVFDGSSHRDVVSYTALITGYAS 181
Query: 153 WGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILA 212
G +E A+ +F+E+P ++VVSW II GY + EAL LF++M+ +P E T++
Sbjct: 182 RGYIESAQKMFDEIPVKDVVSWNAIISGYADTGNNKEALDLFKEMMKTN-VKPDESTMVT 240
Query: 213 VLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVE 272
V+ A Q+G ++ + +H + + G + +++++N LID Y+KCG + +A LF+ +S
Sbjct: 241 VVSACAQSGSIQLGRQVHSWIDDHGLGS-NLKIVNALIDLYSKCGEVETACGLFQGLS-- 297
Query: 273 RKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGL- 331
K+++SW ++I G+ + KEA+ F M + G PN VT LS+L AC+ G ++ G
Sbjct: 298 NKDVISWNTMIGGYTHLNLYKEALLLFQEMLRSGENPNDVTMLSILPACAQLGAIDFGRW 357
Query: 332 --NFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEK--------------------- 368
+ DK ++ ++ LIDM + G +E A +
Sbjct: 358 IHVYIDKRIKGVTNASSLR--TSLIDMYAKCGDIEAAHQVFNSMHHRTLSACNAMIFGFA 415
Query: 369 ------TALGIPSEI------TDVVVWRTLLGACSFHGNVEMGERVTR------KILEME 410
A I S + D + + LL ACS G +++G R+ R KI
Sbjct: 416 MHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRRIFRSMTQNYKITPKL 475
Query: 411 RGYGGDYVLMYNILAGVGRFGDAERLRRVM 440
YG M ++L +G F +AE + M
Sbjct: 476 EHYG----CMIDLLGHLGLFKEAEEMINTM 501
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 90/360 (25%), Positives = 162/360 (45%), Gaps = 25/360 (6%)
Query: 80 LIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYV---SLGFLKDSSKLFDEMP 136
L+ C TL + +HA + K G + Y + L+ + + L + +F+ +
Sbjct: 8 LLHNCKTLQSLRI---IHAQMIKTGLHNTNYALSRLLEFCILSPNFDGLPYAISVFETIQ 64
Query: 137 ERNLVTWNVMITGLVKWGELEFARSLFEEMPC----RNVVSWTGIIDGYTRMNRSNEALA 192
E NL+ WN M G + A L+ M N ++ ++ ++ S E
Sbjct: 65 EPNLLIWNTMFRGHALSSDPVSAIKLYVCMISLGLLPNSYTFPFLLKSCAKLKVSKEGQQ 124
Query: 193 LFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDT 252
+ ++ Y E +++ +NG K + R D+ LI
Sbjct: 125 IHGHVLKLGY-ELDLYVHTSLISMYVKNGRWKDAHKVFDGSSHR-----DVVSYTALITG 178
Query: 253 YAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRV 312
YA G I SA K+F++I V K++VSW +IISG+A G KEA++ F M K +KP+
Sbjct: 179 YASRGYIESAQKMFDEIPV--KDVVSWNAIISGYADTGNNKEALDLFKEMMKTNVKPDES 236
Query: 313 TFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALG 372
T ++V++AC+ G ++ G +++ + ++K LID+ + G +E A G
Sbjct: 237 TMVTVVSACAQSGSIQLGRQVH-SWIDDHGLGSNLKIVNALIDLYSKCGEVETACGLFQG 295
Query: 373 IPSEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMER-GYGGDYVLMYNILAGVGRFG 431
+ ++ DV+ W T++G + ++ + + EM R G + V M +IL + G
Sbjct: 296 LSNK--DVISWNTMIGG---YTHLNLYKEALLLFQEMLRSGENPNDVTMLSILPACAQLG 350
>gi|125564403|gb|EAZ09783.1| hypothetical protein OsI_32071 [Oryza sativa Indica Group]
Length = 628
Score = 235 bits (599), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 138/424 (32%), Positives = 227/424 (53%), Gaps = 14/424 (3%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+NTLL +S + + ++ L+ Q+ S L D T L+ CA L P+ G
Sbjct: 174 WNTLLMGHSRSGNAKQCLALFNQMWM------SGL--TCDDATLCILVDACAELPDPSTG 225
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
+H V+ + G+ VN +L++ Y L + ++F+ M R +WN +I ++
Sbjct: 226 FAIHKVVVQSGWNGIPEVNNSLISFYTKFSLLDCAVQIFESMKTRTTASWNSLIDAHARF 285
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
G +E A LFE P N++SWT +I G+ R ++EALA F KM+ EY +P + T AV
Sbjct: 286 GYIEQAALLFESAPETNIISWTAMIGGFARNGLTSEALAHFVKMLTQEYIQPDDFTFGAV 345
Query: 214 LPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVER 273
L A + S +++H + GF ++ + V N L+D YAKCG + A+ +F+ ++ +
Sbjct: 346 LHACASAPCLASGRMVHSCAFQGGFASY-LYVANNLVDMYAKCGDVEGANNVFD--AIHQ 402
Query: 274 KNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNF 333
K+LVSW +++ GFA++G+ KEA+E + M + P+ VTF +L ACSH GL+E+G F
Sbjct: 403 KDLVSWNTMLFGFAINGLPKEALEVYEIMTYHNVSPDEVTFTGLLTACSHSGLLEQGRAF 462
Query: 334 FDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITD--VVVWRTLLGACS 391
F+ M+ V P +H C++DM R+G + +A + P + + L CS
Sbjct: 463 FESMMSVHGVQPKPEHLSCVLDMYARSGNIAKAIEMMEQYPEIVKSPGSGLSEASLSFCS 522
Query: 392 FHG-NVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPG 450
+ +G +V ++ YV++ N+L GR+ +AER+RR M E+ K PG
Sbjct: 523 SENLDFWVGRKVGDDVVARAPARDTGYVMLSNLLCASGRWDEAERVRRAMAEQGIKKSPG 582
Query: 451 CSLV 454
CS +
Sbjct: 583 CSWI 586
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 96/322 (29%), Positives = 154/322 (47%), Gaps = 51/322 (15%)
Query: 111 VNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRN 170
V ALV+MY D+++ F EMPERN ++W ++ V G +E A LF+EMP ++
Sbjct: 111 VGNALVSMYAKCARAADAARAFREMPERNALSWCSLLHAFVVSGHMELAHELFDEMPSKS 170
Query: 171 VVSWTGIIDGYTRMNRSNEALALFRKM----VACEYTE-----------PSEITILAVLP 215
V+W ++ G++R + + LALF +M + C+ P T A+
Sbjct: 171 NVAWNTLLMGHSRSGNAKQCLALFNQMWMSGLTCDDATLCILVDACAELPDPSTGFAIHK 230
Query: 216 AIWQNG-----DVKSCQLIHGYGEKRGFTAFDIRV-------------LNCLIDTYAKCG 257
+ Q+G +V + LI Y + F+ D V N LID +A+ G
Sbjct: 231 VVVQSGWNGIPEVNN-SLISFYTK---FSLLDCAVQIFESMKTRTTASWNSLIDAHARFG 286
Query: 258 CIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRM-QKVGLKPNRVTFLS 316
I A+ LFE S N++SWT++I GFA +G+ EA+ +F +M + ++P+ TF +
Sbjct: 287 YIEQAALLFE--SAPETNIISWTAMIGGFARNGLTSEALAHFVKMLTQEYIQPDDFTFGA 344
Query: 317 VLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHY----GCLIDMLGRAGRLEQAEKTALG 372
VL+AC+ + G +MV C Y L+DM + G +E A
Sbjct: 345 VLHACASAPCLASG-----RMVHSCAFQGGFASYLYVANNLVDMYAKCGDVEGANNVFDA 399
Query: 373 IPSEITDVVVWRTLLGACSFHG 394
I + D+V W T+L + +G
Sbjct: 400 IHQK--DLVSWNTMLFGFAING 419
>gi|10086462|gb|AAG12522.1|AC015446_3 Hypothetical Protein [Arabidopsis thaliana]
Length = 539
Score = 235 bits (599), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 144/423 (34%), Positives = 228/423 (53%), Gaps = 46/423 (10%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+N ++ ++ + P AF Y+ + + S S D+ T SF ++ CA +
Sbjct: 71 WNAIIRGFAGSSHPSLAFSWYRSM--LQQSSSSSAICRVDALTCSFTLKACARALCSSAM 128
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
QLH I++ G + + T L++ Y K
Sbjct: 129 DQLHCQINRRGLSADSLLCTTLLDAYS-------------------------------KN 157
Query: 154 GELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAV 213
G+L A LF+EMP R+V SW +I G NR++EA+ L+++M E SE+T++A
Sbjct: 158 GDLISAYKLFDEMPVRDVASWNALIAGLVSGNRASEAMELYKRM-ETEGIRRSEVTVVAA 216
Query: 214 LPAIWQNGDVKSCQ-LIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVE 272
L A GDVK + + HGY ++ V N ID Y+KCG + A ++FE +
Sbjct: 217 LGACSHLGDVKEGENIFHGYSND------NVIVSNAAIDMYSKCGFVDKAYQVFEQFT-G 269
Query: 273 RKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLN 332
+K++V+W ++I+GFA+HG A+E F +++ G+KP+ V++L+ L AC H GLVE GL+
Sbjct: 270 KKSVVTWNTMITGFAVHGEAHRALEIFDKLEDNGIKPDDVSYLAALTACRHAGLVEYGLS 329
Query: 333 FFDKMVEECE-VLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACS 391
F+ M C+ V ++KHYGC++D+L RAGRL +A + S I D V+W++LLGA
Sbjct: 330 VFNNMA--CKGVERNMKHYGCVVDLLSRAGRLREAHDIICSM-SMIPDPVLWQSLLGASE 386
Query: 392 FHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGC 451
+ +VEM E +R+I EM GD+VL+ N+ A GR+ D R+R M+ + K+PG
Sbjct: 387 IYSDVEMAEIASREIKEMGVNNDGDFVLLSNVYAAQGRWKDVGRVRDDMESKQVKKIPGL 446
Query: 452 SLV 454
S +
Sbjct: 447 SYI 449
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 125/264 (47%), Gaps = 24/264 (9%)
Query: 153 WGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPS------ 206
+G+L FA +F +P W II G+ + + A + +R M+ + +
Sbjct: 50 FGDLSFAVQIFRYIPKPLTNDWNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDA 109
Query: 207 ---EITILAVLPAIWQNG-DVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSA 262
T+ A A+ + D CQ+ +RG +A D + L+D Y+K G + SA
Sbjct: 110 LTCSFTLKACARALCSSAMDQLHCQI-----NRRGLSA-DSLLCTTLLDAYSKNGDLISA 163
Query: 263 SKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACS 322
KLF+++ V +++ SW ++I+G EA+E + RM+ G++ + VT ++ L ACS
Sbjct: 164 YKLFDEMPV--RDVASWNALIAGLVSGNRASEAMELYKRMETEGIRRSEVTVVAALGACS 221
Query: 323 HGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVV 382
H G V+EG N F + ++ + IDM + G +++A + + + VV
Sbjct: 222 HLGDVKEGENIFHGYSNDNVIVSN-----AAIDMYSKCGFVDKAYQVFEQFTGKKS-VVT 275
Query: 383 WRTLLGACSFHGNVEMGERVTRKI 406
W T++ + HG + K+
Sbjct: 276 WNTMITGFAVHGEAHRALEIFDKL 299
>gi|414880007|tpg|DAA57138.1| TPA: hypothetical protein ZEAMMB73_430226 [Zea mays]
Length = 648
Score = 235 bits (599), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 139/422 (32%), Positives = 235/422 (55%), Gaps = 46/422 (10%)
Query: 34 FNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLG 93
+N+L+ A S A +Y+++ + + SP P +SFT +F ++ CA + P G
Sbjct: 143 YNSLIRALPAAGS-APALAVYRRMLR----AGSPRP---NSFTLAFALKACAAVPAPGEG 194
Query: 94 TQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKW 153
QLHA + G + YV T L+N+Y K
Sbjct: 195 RQLHAQALRQGLATSAYVQTGLLNLYA-------------------------------KC 223
Query: 154 GELEFARSLFEEMPC-RNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILA 212
++ AR++F+ M +N+V+W+ ++ GY+R+ NEAL LFR+M A EP E+T+++
Sbjct: 224 EQVALARTVFDGMAGDKNLVAWSAMVSGYSRVGMVNEALGLFREMQAVG-VEPDEVTMVS 282
Query: 213 VLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVE 272
V+ A + G + + +H Y +++G T D+ + LID YAKCG I A +F D VE
Sbjct: 283 VISACAKAGALDLGKWVHAYIDRKGIT-VDLELSTALIDMYAKCGLIERARGVF-DAMVE 340
Query: 273 RKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLN 332
K+ +W+++I GFA+HG+ ++A+ F RM ++ ++PN VTF+ VL+AC+H GLVE+G
Sbjct: 341 -KDTKAWSAMIVGFAIHGLVEDALGLFSRMLELKVRPNNVTFIGVLSACAHSGLVEDGRR 399
Query: 333 FFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSF 392
++ M + + P +++YGC++D+L R+G L+ A +G+P + V+WRTLL AC
Sbjct: 400 YWSIM-QNLGIKPSMENYGCMVDLLCRSGLLDDAYSFVIGMPVS-PNSVIWRTLLVACKS 457
Query: 393 HGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCS 452
+++ E T+++LE+E +YVL+ N+ A ++ LRR M +N + G S
Sbjct: 458 SNRIDIAESATKRLLELEPHNPENYVLLSNLYASNSQWDRVSYLRRKMKGKNVTAIAGRS 517
Query: 453 LV 454
+
Sbjct: 518 SI 519
>gi|414872719|tpg|DAA51276.1| TPA: methyltransferase small domain protein [Zea mays]
Length = 601
Score = 235 bits (599), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 141/465 (30%), Positives = 243/465 (52%), Gaps = 37/465 (7%)
Query: 16 QIHSHLLTTNSLLHHSQLF--NTLLHFYSLAESPQKAFLLYKQLQQI-----------YT 62
Q+H+H++ + HS+++ N+L+ Y A + A L+++ + Y
Sbjct: 142 QVHAHVVVSGL---HSRVYLRNSLIKMYIDAGDVETAELMFRSALVLDTVSCNIMLSGYV 198
Query: 63 HSHSPLPPLF------------DSFTYSFLIRTCATLSHPNLGTQLHAVISK---VGFQS 107
+ L L+ D +T L+ C L + +G +H VI + G
Sbjct: 199 NEGCTLKALWFFRDMASRGIVVDQYTAVALLTCCGRLKNELIGRSVHGVIVRRMDAGDHG 258
Query: 108 HVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMP 167
+ VN AL++MY G + + +F E E++ ++WN M++G V G L+ A F E P
Sbjct: 259 LILVN-ALLDMYAKCGRMNAAKTIFGETGEKDAISWNTMVSGFVNAGMLDLASRFFSEAP 317
Query: 168 CRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQ 227
R+++SW ++ GY R NE + LF MVA ++T + ++ A G + +
Sbjct: 318 SRDLISWNALLAGYARYKSFNEVMKLFHDMVA-SCVNLDKVTAVTLISAATGKGSLNHAK 376
Query: 228 LIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFA 287
+HG+ K F D + + L+D Y KCG + +A +FE K++ WT++ISG A
Sbjct: 377 SVHGWVVKE-FDHQDAFLASALVDMYCKCGNVKTAYYVFE--KALDKDVTLWTAMISGLA 433
Query: 288 MHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDI 347
+G G EA+E F +MQ + PN VT L+VL+ACSH GL++EG FD M + + P I
Sbjct: 434 FNGHGTEALELFCKMQTEVVAPNGVTLLAVLSACSHSGLLDEGCKIFDAMKQRYSIEPGI 493
Query: 348 KHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHGNVEMGERVTRKIL 407
+H+GC++D+L R+GRL A A +P + +W ++L A N+E+ E ++++L
Sbjct: 494 EHFGCMVDLLARSGRLIDALALARRMPMRPSR-SIWGSILNASLAGQNIEVAEIASKELL 552
Query: 408 EMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPGCS 452
++ G YVL+ N+ A G + ++++R++M+ + K+ G S
Sbjct: 553 RLDPAEEGGYVLLSNLHAAGGHWNHSDKVRQIMERKGLRKLAGAS 597
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 83/348 (23%), Positives = 159/348 (45%), Gaps = 43/348 (12%)
Query: 64 SHSPLPPLFDSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLG 123
+ S LP D T+ L+R+ LS G Q+HA + G S VY+ +L+ MY+ G
Sbjct: 117 ASSVLP---DQQTFLALLRSVERLSA---GRQVHAHVVVSGLHSRVYLRNSLIKMYIDAG 170
Query: 124 FLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTR 183
++ + +F + V+ N+M++G V G A F +M R +V +D YT
Sbjct: 171 DVETAELMFRSALVLDTVSCNIMLSGYVNEGCTLKALWFFRDMASRGIV-----VDQYTA 225
Query: 184 M-------NRSNEALA------LFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIH 230
+ NE + + R+M A ++ I + A+L + G + + + I
Sbjct: 226 VALLTCCGRLKNELIGRSVHGVIVRRMDAGDH---GLILVNALLDMYAKCGRMNAAKTIF 282
Query: 231 G-YGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMH 289
G GEK D N ++ + G + AS+ F + ++L+SW ++++G+A +
Sbjct: 283 GETGEK------DAISWNTMVSGFVNAGMLDLASRFFSE--APSRDLISWNALLAGYARY 334
Query: 290 GMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKH 349
E ++ F M + ++VT +++++A + G + + +V+E + D
Sbjct: 335 KSFNEVMKLFHDMVASCVNLDKVTAVTLISAATGKGSLNHAKSVHGWVVKEFD-HQDAFL 393
Query: 350 YGCLIDMLGRAGRLEQAEKTALGIPSEI--TDVVVWRTLLGACSFHGN 395
L+DM + G + KTA + + DV +W ++ +F+G+
Sbjct: 394 ASALVDMYCKCGNV----KTAYYVFEKALDKDVTLWTAMISGLAFNGH 437
>gi|302141697|emb|CBI18900.3| unnamed protein product [Vitis vinifera]
Length = 637
Score = 235 bits (599), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 131/375 (34%), Positives = 209/375 (55%), Gaps = 36/375 (9%)
Query: 80 LIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERN 139
++ CA + + G LH V+ K+G V +L+NMY LGFL +S+LF+EMP R+
Sbjct: 170 VVSACADMGALDEGKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRS 229
Query: 140 LVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVA 199
LV+WN M+ G E LF N++ GI
Sbjct: 230 LVSWNSMVVIHNHNGYAEKGMDLF------NLMKRAGI---------------------- 261
Query: 200 CEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCI 259
P + T++A+L A G + + IH Y + GF A DI + L++ YAK G +
Sbjct: 262 ----NPDQATMVALLRACTDTGLGRQAESIHAYIHRCGFNA-DIIIATALLNLYAKLGRL 316
Query: 260 FSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLN 319
++ +FE+I + ++ ++WT++++G+A+H G+EA++ F M K G++ + VTF +L+
Sbjct: 317 NASEDIFEEI--KDRDRIAWTAMLAGYAVHACGREAIKLFDLMVKEGVEVDHVTFTHLLS 374
Query: 320 ACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITD 379
ACSH GLVEEG +F+ M E V P + HY C++D+LGR+GRLE A + +P E +
Sbjct: 375 ACSHSGLVEEGKKYFEIMSEVYRVEPRLDHYSCMVDLLGRSGRLEDAYELIKSMPMEPSS 434
Query: 380 VVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRV 439
VW LLGAC +GNVE+G+ V ++L ++ +Y+++ NI + G + DA ++R +
Sbjct: 435 -GVWGALLGACRVYGNVELGKEVAEQLLSLDPSDHRNYIMLSNIYSAAGLWRDASKVRAL 493
Query: 440 MDERNAFKVPGCSLV 454
M ER + PGCS +
Sbjct: 494 MKERRLTRNPGCSFI 508
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 102/409 (24%), Positives = 189/409 (46%), Gaps = 49/409 (11%)
Query: 37 LLHFYSLAESPQKAFLLYK---QLQQIYTHSHSPLPPLFDSFT----YSFLIRTCATLSH 89
+ F A + FLL K ++I + L P F ++ F I +C ++S+
Sbjct: 21 FISFKKFAHIQKYPFLLCKFFISKRRICNANLFQLSPPFQVYSIVQSLVFAISSCTSVSY 80
Query: 90 PNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITG 149
+ +HA + K S ++ LV+MY LG+ +D+ +LFDEMP ++LV+WN +++G
Sbjct: 81 C---SAIHARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDEMPNKDLVSWNSLMSG 137
Query: 150 LVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEIT 209
L G L ++ + RM + +P+E+T
Sbjct: 138 LSGRGYL------------------GACLNAFCRMRTESG-------------RQPNEVT 166
Query: 210 ILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDI 269
+L+V+ A G + + +HG K G + +V+N LI+ Y K G + +AS+LFE++
Sbjct: 167 LLSVVSACADMGALDEGKSLHGVVVKLGMSG-KAKVVNSLINMYGKLGFLDAASQLFEEM 225
Query: 270 SVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEE 329
V ++LVSW S++ +G ++ ++ F M++ G+ P++ T +++L AC+ GL +
Sbjct: 226 PV--RSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGINPDQATMVALLRACTDTGLGRQ 283
Query: 330 GLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGA 389
+ + C DI L+++ + GRL +E I D + W +L
Sbjct: 284 AESIH-AYIHRCGFNADIIIATALLNLYAKLGRLNASEDIFEEIKDR--DRIAWTAMLAG 340
Query: 390 CSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRR 438
+ H E + L ++ G D+V ++L+ G E ++
Sbjct: 341 YAVHACGR--EAIKLFDLMVKEGVEVDHVTFTHLLSACSHSGLVEEGKK 387
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 103/258 (39%), Gaps = 42/258 (16%)
Query: 73 DSFTYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLF 132
D T L+R C +HA I + GF + + + TAL+N+Y LG L S +F
Sbjct: 264 DQATMVALLRACTDTGLGRQAESIHAYIHRCGFNADIIIATALLNLYAKLGRLNASEDIF 323
Query: 133 DEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALA 192
+E+ +R+ + W M+ GY EA+
Sbjct: 324 EEIKDRDRIAWTAMLA-------------------------------GYAVHACGREAIK 352
Query: 193 LFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDT 252
LF MV E E +T +L A +G V+ + + + +C++D
Sbjct: 353 LFDLMVK-EGVEVDHVTFTHLLSACSHSGLVEEGKKYFEIMSEVYRVEPRLDHYSCMVDL 411
Query: 253 YAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHG---MGKEAVENFGRMQKVGLKP 309
+ G + A +L + + +E + V W +++ ++G +GKE E Q + L P
Sbjct: 412 LGRSGRLEDAYELIKSMPMEPSSGV-WGALLGACRVYGNVELGKEVAE-----QLLSLDP 465
Query: 310 -NRVTFLSVLNACSHGGL 326
+ ++ + N S GL
Sbjct: 466 SDHRNYIMLSNIYSAAGL 483
>gi|357120906|ref|XP_003562165.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
chloroplastic-like [Brachypodium distachyon]
Length = 529
Score = 235 bits (599), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 137/434 (31%), Positives = 212/434 (48%), Gaps = 17/434 (3%)
Query: 29 HHSQ----LFNTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFT--YSFLIR 82
HH + ++NT + S P A L+ + + SP PP +F ++ R
Sbjct: 94 HHPRPNAFMWNTAIRALSDGPGPDAAVALFLDMLR------SPTPPERRTFPSLFASYAR 147
Query: 83 TCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPER-NLV 141
G LH ++ K+G YV +++ MY S G ++ L+ + + ++V
Sbjct: 148 LGVRADDDGAGAALHGMVLKLGLAGDAYVRNSMIAMYASWGRADEALLLYGQCGQAFDVV 207
Query: 142 TWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACE 201
N I L + G ++ AR +F+ MP R V +W+ ++ Y+R R +A+ LF M A
Sbjct: 208 ACNSAIVALTRAGRVDEAREVFDAMPARTVATWSAMVSAYSRAARCQDAVELFSAMQA-S 266
Query: 202 YTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFS 261
EP+ +++VL G ++ +H Y +K G A + V+ L+D Y KCG I
Sbjct: 267 GVEPNANVLVSVLGCCAALGALEQGAWVHAYIDKHG-VAMNALVVTALVDMYCKCGSIHK 325
Query: 262 ASKLFE-DISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNA 320
A +F+ S L SW +++ G A+HG +EA+ F ++ GL P+ VTF+++L A
Sbjct: 326 ARHVFDASRSQGLAKLSSWNAMMLGLAVHGQCQEALALFSELETYGLSPDNVTFITILMA 385
Query: 321 CSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDV 380
H G+ +E F M E V P I+HYGCL+D L RAGRL +AE +P D
Sbjct: 386 YGHSGMADEAKALFSAMEREYAVTPGIEHYGCLVDALARAGRLGEAEDVIRTMPMR-PDT 444
Query: 381 VVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVM 440
+W LL C HG+ E G R +E + G YVL ++LA G G +R M
Sbjct: 445 AIWGALLSGCRLHGDAEAGARAASGAMECDPQDSGAYVLAASVLARDGEVGAGVSVRERM 504
Query: 441 DERNAFKVPGCSLV 454
KVPGCS++
Sbjct: 505 RVEGVAKVPGCSMI 518
>gi|125605235|gb|EAZ44271.1| hypothetical protein OsJ_28890 [Oryza sativa Japonica Group]
Length = 630
Score = 235 bits (599), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 139/380 (36%), Positives = 202/380 (53%), Gaps = 42/380 (11%)
Query: 109 VYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPC 168
V+ TA+V+ Y G L+++ ++FD MPERN V+WN M+ ++ ++ A+ LF MPC
Sbjct: 130 VFTWTAVVSGYAQNGMLEEARRVFDAMPERNAVSWNAMVAAYIQRRMMDEAKELFNMMPC 189
Query: 169 RNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNG-DVKSCQ 227
RNV SW ++ GY + EA A+F M + ++ A+L A Q G ++ Q
Sbjct: 190 RNVASWNTMLTGYAQAGMLEEAKAVFDTM-----PQKDAVSWAAMLAAYSQGGCSEETLQ 244
Query: 228 LIHGYGE------KRGF-----TAFDIRVLNC----------------------LIDTYA 254
L G + F T DI L C L+ Y
Sbjct: 245 LFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYF 304
Query: 255 KCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTF 314
KCG + A FE++ E +++VSW ++I+G+A HG GKEA+E F M+ KP+ +T
Sbjct: 305 KCGNMEDARNAFEEM--EERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITL 362
Query: 315 LSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIP 374
+ VL ACSH GLVE+G+++F M + V +HY C+ID+LGRAGRL +A +P
Sbjct: 363 VGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMP 422
Query: 375 SEITDVVVWRTLLGACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAE 434
E D +W LLGA H N E+G KI E+E G YVL+ NI A G++ DA
Sbjct: 423 FE-PDSTMWGALLGASRIHRNPELGRSAAEKIFELEPENAGMYVLLSNIYASSGKWRDAR 481
Query: 435 RLRRVMDERNAFKVPGCSLV 454
++R +M+ER KVPG S +
Sbjct: 482 KMRVMMEERGVKKVPGFSWI 501
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 142/287 (49%), Gaps = 25/287 (8%)
Query: 113 TALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVV 172
AL++ YV G + ++ +LFD MP R++V+WN+M++G + G++ AR LF+ P R+V
Sbjct: 72 NALMSGYVQWGKMSEARELFDRMPGRDVVSWNIMVSGYARRGDMVEARRLFDAAPVRDVF 131
Query: 173 SWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGY 232
+WT ++ GY + EA +F M E + ++ A++ A Q + + +
Sbjct: 132 TWTAVVSGYAQNGMLEEARRVFDAM-----PERNAVSWNAMVAAYIQRRMMDEAKELFNM 186
Query: 233 GEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMG 292
R ++ N ++ YA+ G + A +F+ ++ +K+ VSW ++++ ++ G
Sbjct: 187 MPCRNVASW-----NTMLTGYAQAGMLEEAKAVFD--TMPQKDAVSWAAMLAAYSQGGCS 239
Query: 293 KEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGC 352
+E ++ F M + G NR F VL+ C+ +E G+ +++ + GC
Sbjct: 240 EETLQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGV------GC 293
Query: 353 -----LIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACSFHG 394
L+ M + G +E A + E DVV W T++ + HG
Sbjct: 294 FVGNALLAMYFKCGNMEDARNAFEEM--EERDVVSWNTMIAGYARHG 338
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 126/263 (47%), Gaps = 23/263 (8%)
Query: 135 MPERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALF 194
MP R+ VT+NVMI+ G + AR F+ P ++ VSW G++ Y R R EA LF
Sbjct: 1 MPVRDSVTYNVMISSHANHGLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLF 60
Query: 195 RKMVACEYTEPSEITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYA 254
TE I+ A++ Q G + + + R D+ N ++ YA
Sbjct: 61 NSR-----TEWDVISWNALMSGYVQWGKMSEARELFDRMPGR-----DVVSWNIMVSGYA 110
Query: 255 KCGCIFSASKLFEDISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTF 314
+ G + A +LF+ V +++ +WT+++SG+A +GM +EA F M + N V++
Sbjct: 111 RRGDMVEARRLFDAAPV--RDVFTWTAVVSGYAQNGMLEEARRVFDAMP----ERNAVSW 164
Query: 315 LSVLNACSHGGLVEEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIP 374
+++ A +++E F+ M C ++ + ++ +AG LE+A+ +P
Sbjct: 165 NAMVAAYIQRRMMDEAKELFNMM--PCR---NVASWNTMLTGYAQAGMLEEAKAVFDTMP 219
Query: 375 SEITDVVVWRTLLGACSFHGNVE 397
+ D V W +L A S G E
Sbjct: 220 QK--DAVSWAAMLAAYSQGGCSE 240
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 98/227 (43%), Gaps = 38/227 (16%)
Query: 76 TYSFLIRTCATLSHPNLGTQLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEM 135
++ ++ TCA ++ G QLH + + G+ +V AL+ MY G ++D+ F+EM
Sbjct: 260 AFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEM 319
Query: 136 PERNLVTWNVMITGLVKWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFR 195
ER++V+WN MI GY R EAL +F
Sbjct: 320 EERDVVSWNTMIA-------------------------------GYARHGFGKEALEIF- 347
Query: 196 KMVACEYTEPSEITILAVLPAIWQNGDV-KSCQLIHGYGEKRGFTAFDIRVLNCLIDTYA 254
M+ T+P +IT++ VL A +G V K + G TA C+ID
Sbjct: 348 DMMRTTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHHDFGVTA-KPEHYTCMIDLLG 406
Query: 255 KCGCIFSASKLFEDISVERKNLVSWTSIISGFAMH---GMGKEAVEN 298
+ G + A L +D+ E + + W +++ +H +G+ A E
Sbjct: 407 RAGRLAEAHDLMKDMPFEPDSTM-WGALLGASRIHRNPELGRSAAEK 452
>gi|357153639|ref|XP_003576518.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g56310-like [Brachypodium distachyon]
Length = 538
Score = 234 bits (598), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 131/364 (35%), Positives = 211/364 (57%), Gaps = 9/364 (2%)
Query: 93 GTQLHAVISKVGF-QSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERNLVTWNVMITGLV 151
G LHA G QS +V T+L++MY + G L D+ K+FDEMPER + WN M++ V
Sbjct: 172 GPALHASALATGLAQSSSHVMTSLLDMYATAGQLGDAGKVFDEMPERTVAAWNCMLSAYV 231
Query: 152 KWGELEFARSLFEEMPCRNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSEITIL 211
+ GE++ A F EMP R+ V+WT +I G R+ EA+ LF +M + +T++
Sbjct: 232 RCGEVDAALHFFGEMPGRDAVAWTTVIAGCANAGRAAEAVDLFWRMRKARVKD-DAVTMV 290
Query: 212 AVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFEDISV 271
A+L A + GD++ + +H ++ G + + N LI Y +CG + A +F + +
Sbjct: 291 ALLTACAELGDLQLGRWVHARVDQDGQDQRIVLLDNALIHMYVRCGAVEDAHCMF--LRM 348
Query: 272 ERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLVEEGL 331
R++ VSWT++ISG A+HG +EA+E F RM++ +P+ T L+VL ACSH G V+
Sbjct: 349 PRRSTVSWTTMISGLAIHGRAEEALELFRRMEE---RPDGATLLAVLWACSHSGKVDFAW 405
Query: 332 NFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLLGACS 391
+F+ M + P+I HYGC++DML R+ RL +A + A +P + ++ VW LL C
Sbjct: 406 RYFESMERLYGITPEIHHYGCMVDMLCRSRRLYEALELAETMPLQ-SNEAVWGALLSGCK 464
Query: 392 FHGNVEMGERVTRKILEMERGYG-GDYVLMYNILAGVGRFGDAERLRRVMDERNAFKVPG 450
GN+E+ +V +++E++ G VL+ N+ A VG++ A+ +R + N+ K G
Sbjct: 465 REGNLELSAKVVDRLIELQPNRAVGHLVLLSNMYAAVGQWEQAQMVRERVAAMNSGKPAG 524
Query: 451 CSLV 454
S V
Sbjct: 525 GSWV 528
>gi|413920230|gb|AFW60162.1| hypothetical protein ZEAMMB73_962137 [Zea mays]
Length = 516
Score = 234 bits (598), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 141/427 (33%), Positives = 234/427 (54%), Gaps = 26/427 (6%)
Query: 35 NTLLHFYSLAESPQKAFLLYKQLQQIYTHSHSPLPPLFDSFTYSFLIRTCATLSHPNLGT 94
N + S + P AF L L+Q H+P D T+ LI ++L L
Sbjct: 103 NAAVKALSASSPPDDAFRLLSTLRQF----HAP-----DRLTFLPLIGCASSLP---LLY 150
Query: 95 QLHAVISKVGFQSHVYVNTALVNMYVSLGFLKDSSKLFDEMPERN--LVTWNVMITGLVK 152
LH+++ ++GF SH ++ AL+ Y L + LFD+MP++N V +N +IT ++
Sbjct: 151 ALHSLLLRLGFLSHHVISLALLKPYP----LPQARVLFDDMPQKNKCTVAYNTLITACLR 206
Query: 153 WGELEFARSLFEEMPC-----RNVVSWTGIIDGYTRMNRSNEALALFRKMVACEYTEPSE 207
++ AR LF+EM R+VVSW +I G R R + A++ F +M+ P +
Sbjct: 207 VRDIRAARHLFDEMQWHRRSRRSVVSWNLMIAGCARCGRDDMAVSCFERMIREGEVAPDD 266
Query: 208 ITILAVLPAIWQNGDVKSCQLIHGYGEKRGFTAFDIRVLNCLIDTYAKCGCIFSASKLFE 267
T++AVLPA + G+V++ + H Y K G + V N L+D Y K G + SA ++F
Sbjct: 267 GTLVAVLPACGRTGNVRAGRWAHEYARKSGLLDGTVHVANALMDMYCKSGDVNSAREVF- 325
Query: 268 DISVERKNLVSWTSIISGFAMHGMGKEAVENFGRMQKVGLKPNRVTFLSVLNACSHGGLV 327
++ +++VSW ++I+GF+++G G E ++ F M++ G++PN VTFL+VL C+H G V
Sbjct: 326 -MTTRPRSVVSWNTLIAGFSLNGRGVEGIDLFQEMRRQGMEPNAVTFLAVLGCCAHAGAV 384
Query: 328 EEGLNFFDKMVEECEVLPDIKHYGCLIDMLGRAGRLEQAEKTALGIPSEITDVVVWRTLL 387
+ G F M+ E I+HYGC++D+ GR+G LE+A G+P + + +W LL
Sbjct: 385 DIGREIFRSMLSEHGTEAAIEHYGCMVDLFGRSGLLEEAHVLIQGMPMK-PNAAIWGALL 443
Query: 388 GACSFHGNVEMGERVTRKILEMERGYGGDYVLMYNILAGVGRFGDAERLRRVMDERNAFK 447
AC H + + E ++++ +E G+YVL+ N+ R+ +A +RR+M + K
Sbjct: 444 SACRAHAGLGLAEVALKELINLEPWNSGNYVLLANLYVETERWDEAGEVRRLMRRMSVNK 503
Query: 448 VPGCSLV 454
PG S +
Sbjct: 504 APGQSFM 510
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.323 0.138 0.420
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,033,832,694
Number of Sequences: 23463169
Number of extensions: 288793207
Number of successful extensions: 758011
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 7986
Number of HSP's successfully gapped in prelim test: 3036
Number of HSP's that attempted gapping in prelim test: 609932
Number of HSP's gapped (non-prelim): 50439
length of query: 454
length of database: 8,064,228,071
effective HSP length: 146
effective length of query: 308
effective length of database: 8,933,572,693
effective search space: 2751540389444
effective search space used: 2751540389444
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 79 (35.0 bits)