BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 012882
(454 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q3V384|LACE1_MOUSE Lactation elevated protein 1 OS=Mus musculus GN=Lace1 PE=2 SV=1
Length = 480
Score = 206 bits (523), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 138/401 (34%), Positives = 207/401 (51%), Gaps = 69/401 (17%)
Query: 43 PKGLYLYGNVGSGKTMLMDMFYGATEGIVKHRQRFHFHEAMLKINEHMHRLWKNQVAEKS 102
PKGLY+YG+VG+GKTM+MDMFY E K ++R HFH ML ++ +H L ++S
Sbjct: 129 PKGLYVYGDVGTGKTMVMDMFYAYVE--TKRKKRVHFHGFMLDVHRRIHHL------KQS 180
Query: 103 LRSSISGWITNLPFDSKVMEWVAA-EEKYKQEVQMKNILPAVADKFLVDQHADQRGASIL 161
L +G++ +K + +A E+ QE S+L
Sbjct: 181 LPKRKAGFM------AKSYDPIAPIAEEISQET------------------------SLL 210
Query: 162 CFDEIQTVDVFAIVALSGIVSRLLSTGTVLVATSNRAPWDLNQDGMQREIFQKLVAKLEK 221
CFDE Q D+ + L + L G V+VATSNR P DL ++G+QR F +A L++
Sbjct: 211 CFDEFQVTDIADAMILKQLFENLFKNGVVVVATSNRPPEDLYKNGLQRANFVPFIAVLKE 270
Query: 222 HCEIIPIGSEVDYRRLIAQRSIDQVHYFWPLDDNAVRQLEAMWCQVTNHFGGKIISSTIP 281
+C+ + + S VDYR+ R + + L A +EA+ ++ + K T P
Sbjct: 271 YCDTLQLDSGVDYRK----RELAPAGKLYYLTSEA--DVEAVVDKLFDELAQKQNDLTSP 324
Query: 282 VMF---GRTLEVPQSCNGVARFTFEYLCGRPVGAADYIAVAHNYHTVFITNIPVMSMRIR 338
+ GR L + ++C VA TFE LC RP+GA+DY+ ++ N+ TV I NIP S+ R
Sbjct: 325 RILKVQGRELRLNKACGSVADCTFEELCERPLGASDYLELSKNFDTVIIRNIPQFSLAKR 384
Query: 339 DKARRFITLIDELYNHHCCLFCSAASSIDDLFQGTEEGTLFDLESFQFETEIEGGKLRRD 398
+ARRFITLID Y+ + CSA++ I LF L Q ++E + ++ D
Sbjct: 385 TQARRFITLIDNFYDFKVRIICSASAPISSLF----------LHQHQ-DSESDQSRILMD 433
Query: 399 VLAEGTVSSGGAPAGIVSMLSGQEELFAFRRAWFVTVSTLV 439
L S+G +SM +G+EE+FAF+R T+S L
Sbjct: 434 DLGLSQDSAG------LSMFTGEEEIFAFQR----TISRLT 464
>sp|Q8WV93|LACE1_HUMAN Lactation elevated protein 1 OS=Homo sapiens GN=LACE1 PE=2 SV=2
Length = 481
Score = 204 bits (520), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 133/411 (32%), Positives = 209/411 (50%), Gaps = 70/411 (17%)
Query: 43 PKGLYLYGNVGSGKTMLMDMFYGATEGIVKHRQRFHFHEAMLKINEHMHRLWKNQVAEKS 102
P+GLY+YG+VG+GKTM+MDMFY E +K ++R HFH ML +++ +HRL ++S
Sbjct: 129 PRGLYVYGDVGTGKTMVMDMFYAYVE--MKRKKRVHFHGFMLDVHKRIHRL------KQS 180
Query: 103 LRSSISGWITNLPFD--SKVMEWVAAEEKYKQEVQMKNILPAVADKFLVDQHADQRGASI 160
L G++ +D + + E ++ E A +
Sbjct: 181 LPKRKPGFMAK-SYDPIAPIAEEISEE------------------------------ACL 209
Query: 161 LCFDEIQTVDVFAIVALSGIVSRLLSTGTVLVATSNRAPWDLNQDGMQREIFQKLVAKLE 220
LCFDE Q D+ + L + L G V+VATSNR P DL ++G+QR F +A L+
Sbjct: 210 LCFDEFQVTDIADAMILKQLFENLFKNGVVVVATSNRPPEDLYKNGLQRANFVPFIAVLK 269
Query: 221 KHCEIIPIGSEVDYRRLIAQRSIDQVHYFWPLDDNAVRQLEAMWCQVTNHFGGKIISSTI 280
++C + + S +DYR+ R + + L A +EA+ ++ + K T
Sbjct: 270 EYCNTVQLDSGIDYRK----RELPAAGKLYYLTSEA--DVEAVMDKLFDELAQKQNDLTR 323
Query: 281 PVMF---GRTLEVPQSCNGVARFTFEYLCGRPVGAADYIAVAHNYHTVFITNIPVMSMRI 337
P + GR L + ++C VA TFE LC RP+GA+DY+ ++ N+ T+F+ NIP ++
Sbjct: 324 PRILKVQGRELRLNKACGTVADCTFEELCERPLGASDYLELSKNFDTIFLRNIPQFTLAN 383
Query: 338 RDKARRFITLIDELYNHHCCLFCSAASSIDDLFQGTEEGTLFDLESFQFETEIEGGKLRR 397
R + RRFITLID Y+ + CSA++ I LF ++E+E ++
Sbjct: 384 RTQGRRFITLIDNFYDLKVRIICSASTPISSLFLHQHH-----------DSELEQSRILM 432
Query: 398 DVLAEGTVSSGGAPAGIVSMLSGQEELFAFRRAWFVTVSTLVVDINDGYVN 448
D L S+ G +SM +G+EE+FAF+R T+S L + Y N
Sbjct: 433 DDLGLSQDSAEG-----LSMFTGEEEIFAFQR----TISRLTEMQTEQYWN 474
>sp|Q32PX9|LACE1_RAT Lactation elevated protein 1 OS=Rattus norvegicus GN=Lace1 PE=2
SV=1
Length = 480
Score = 200 bits (508), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 132/391 (33%), Positives = 200/391 (51%), Gaps = 65/391 (16%)
Query: 43 PKGLYLYGNVGSGKTMLMDMFYGATEGIVKHRQRFHFHEAMLKINEHMHRLWKNQVAEKS 102
PKGLY+YG+VG+GKTM+MDMFY E VK ++R HFH ML +++ +HRL ++S
Sbjct: 129 PKGLYVYGDVGTGKTMVMDMFYEYVE--VKSKRRVHFHGFMLDVHKRIHRL------KQS 180
Query: 103 LRSSISGWITNLPFDSKVMEWVAA-EEKYKQEVQMKNILPAVADKFLVDQHADQRGASIL 161
L G++ +K + +A E+ QE AS+L
Sbjct: 181 LPKRKVGFM------AKSYDPIAPIAEEISQE------------------------ASLL 210
Query: 162 CFDEIQTVDVFAIVALSGIVSRLLSTGTVLVATSNRAPWDLNQDGMQREIFQKLVAKLEK 221
CFDE Q D+ + L + L G V+VATSNR P DL ++G+QR F +A L++
Sbjct: 211 CFDEFQVTDIADAMILKQLFENLFKNGVVVVATSNRPPEDLYKNGLQRANFVPFIAVLKE 270
Query: 222 HCEIIPIGSEVDYRRLIAQRSIDQVHYFWPLDDNAVRQLEAMWCQVTNHFGGKIISSTIP 281
+C + + S VDYR+ R + + L A + + ++ + K T P
Sbjct: 271 YCNTVQLDSGVDYRK----RELTPAGKLYYLTSEA--DVGTVMDKLFDELAQKQNDLTSP 324
Query: 282 VMF---GRTLEVPQSCNGVARFTFEYLCGRPVGAADYIAVAHNYHTVFITNIPVMSMRIR 338
+ GR L + ++C VA TFE LC RP+GA+DY+ ++ N+ TV I NIP S+ R
Sbjct: 325 RILKVQGRELRLNKACGTVADCTFEELCERPLGASDYLELSKNFDTVIIRNIPQFSLAKR 384
Query: 339 DKARRFITLIDELYNHHCCLFCSAASSIDDLFQGTEEGTLFDLESFQFETEIEGGKLRRD 398
+ RRFITLID Y+ + CSA+ I LF + ++E + ++ D
Sbjct: 385 TQVRRFITLIDNFYDFKVRIICSASVPISSLFVYQHQ-----------DSESDQSRVLMD 433
Query: 399 VLAEGTVSSGGAPAGIVSMLSGQEELFAFRR 429
L S+G +SM +G+EE+F+F+R
Sbjct: 434 DLGLSQDSAG------LSMFTGEEEIFSFQR 458
>sp|P46441|N2B_HAEIR Putative ATPase N2B OS=Haematobia irritans PE=2 SV=1
Length = 464
Score = 192 bits (489), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 129/391 (32%), Positives = 192/391 (49%), Gaps = 57/391 (14%)
Query: 42 APKGLYLYGNVGSGKTMLMDMFYGATEGIVKHRQRFHFHEAMLKINEHMHRLWKNQVAEK 101
APKG+Y+YG+VG GKT LMDMFY + I K +QR HF+ M K++ +H++ + E+
Sbjct: 109 APKGMYIYGSVGGGKTTLMDMFYSCCDDIPK-KQRVHFNSFMSKVHGLIHKVKQ----ER 163
Query: 102 SLRSSISGWITNLPFDSK--VMEWVAAEEKYKQEVQMKNILPAVADKFLVDQHADQRGAS 159
+ LPFD V E +A E +
Sbjct: 164 GPQDRAFNSEKPLPFDPTLPVAEMIANE------------------------------SW 193
Query: 160 ILCFDEIQTVDVFAIVALSGIVSRLLSTGTVLVATSNRAPWDLNQDGMQREIFQKLVAKL 219
++CFDE Q D+ + L + + L + G V +ATSNR P DL ++G+QR F + L
Sbjct: 194 LICFDEFQVTDIADAMILKSLFTHLFNEGIVCIATSNRHPNDLYKNGLQRSNFIPFIGVL 253
Query: 220 EKHCEIIPIGSEVDYRRLIAQRSIDQVHYFWPLDDNAVRQLEAMWCQVTNHFGGKIISST 279
C + + S VDYRR IAQ +YF +A Q+E M+ + + I T
Sbjct: 254 LNRCNVAAMDSGVDYRR-IAQSG--DTNYFVTTQTDAKSQMERMFKILCSQENDIIRPRT 310
Query: 280 IPVMFGRTLEVPQSCNGVARFTFEYLCGRPVGAADYIAVAHNYHTVFITNIPVMSMRIRD 339
I FGR L ++C V FE LC RP+G +DYI + +HTV I ++P +++ ++
Sbjct: 311 I-THFGRDLTFQRTCGQVLDSNFEELCNRPLGGSDYIQIGQFFHTVLIHDVPQLTLLLKS 369
Query: 340 KARRFITLIDELYNHHCCLFCSAASSIDDLFQGTEEGTLFDLESFQFETEIEGGKLRRDV 399
+ RRFITLID LY++ + SA +D LF T++ DL Q ++ D
Sbjct: 370 QMRRFITLIDTLYDNRVRVVISAEVPLDQLFSFTDKPK--DLADEQ--------RMLMDD 419
Query: 400 LAEGTVSSGGAPAGIVSMLSGQEELFAFRRA 430
L G + S+ +G+EE+FAF R
Sbjct: 420 LKLGDTDTSA------SVFTGEEEMFAFDRT 444
>sp|O42895|YBQ2_SCHPO Uncharacterized protein C115.02c OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPBC115.02c PE=3 SV=1
Length = 454
Score = 181 bits (460), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 128/417 (30%), Positives = 189/417 (45%), Gaps = 77/417 (18%)
Query: 19 WVSYLNR---ERKLDSLVGRCPTAPPAPKGLYLYGNVGSGKTMLMDMFYGATEGIVKHRQ 75
W+S L + +K +L P P PKG+YLYG+VG GKT LMD+FY V Q
Sbjct: 92 WISPLKKMFSRKKSPTLTSSLP-VPGMPKGIYLYGDVGCGKTALMDLFYHNLPPNVTRSQ 150
Query: 76 RFHFHEAMLKINEHMHRLWKNQVAEKSLRSSISGWITNLPFDSKVMEWVAAEEKYKQEVQ 135
R HFH M++++ H L +++Y E+
Sbjct: 151 RIHFHAFMMQVHRTSHDL---------------------------------QDRYGFEID 177
Query: 136 -MKNILPAVADKFLVDQHADQRGASILCFDEIQTVDVFAIVALSGIVSRLLSTGTVLVAT 194
+ +I +A + ++LCFDE+Q DV + L + L+ G V+ T
Sbjct: 178 FIDHIASGIA-----------KETTVLCFDELQVTDVADALLLRRLFEALMKYGVVIFIT 226
Query: 195 SNRAPWDLNQDGMQREIFQKLVAKLEKHCEIIPIGSEVDYRRLIAQRSIDQVHYFWPLDD 254
SNRAP DL ++G+QRE F + LE ++I + S DYRRL +S + Y +P +
Sbjct: 227 SNRAPSDLYKNGIQRESFIPCIKLLEHRLQVICLDSPNDYRRL---KSKTEDTYLYPANS 283
Query: 255 NAVRQLEAMWCQVTNHFGGKIISSTIPVMFGRTLEVPQSCNGVARFTFEYLCGRPVGAAD 314
V++ W + V FGR + VP++ VA FTFE LCG P AAD
Sbjct: 284 PEVKKALENWFLCYADEKDPAHQDEVEV-FGRKIIVPKASGNVAWFTFEQLCGEPKSAAD 342
Query: 315 YIAVAHNYHTVFITNIPVMSMRIRDKARRFITLIDELYNHHCCLFCSAASSIDDLFQGTE 374
Y+++A YH +++IP +S+ +D RFIT ID LY+ H L S+ + +++
Sbjct: 343 YLSLASRYHVFIVSDIPKLSIESKDLIHRFITFIDALYDTHGKLILSSEVPVQEIYPTAP 402
Query: 375 EGTLFDLESFQFETEIEGGKLRRDVLAEGTVSS--GGAPAGIVSMLSGQEELFAFRR 429
L D A+G + S GA GI EE+F F R
Sbjct: 403 SEVLSSTA---------------DPAAKGKIESHYHGAFGGI-------EEVFTFTR 437
>sp|Q5TYS0|LCE1B_DANRE Lactation elevated protein 1 homolog B OS=Danio rerio GN=lace1b
PE=2 SV=1
Length = 503
Score = 168 bits (425), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 117/405 (28%), Positives = 198/405 (48%), Gaps = 69/405 (17%)
Query: 38 TAPPAPKGLYLYGNVGSGKTMLMDMFYGATEGIVKHRQRFHFHEAMLKINEHMHRLWKNQ 97
+ P P+G Y+YGNVG+GKTMLMD+FY E + ++R HF+ ML ++ +H+L
Sbjct: 147 SKPHPPQGYYIYGNVGTGKTMLMDLFYSFVEN--RRKKRVHFNGFMLDVHRRIHKL---- 200
Query: 98 VAEKSLRSSISGWITNL-PFDSKVMEWVAAEEKYKQEVQMKNILPAVADKFLVDQHADQR 156
++SL G +T P ME AEE
Sbjct: 201 --KQSLPKRRIGKMTMYDPIFPVAME--IAEE---------------------------- 228
Query: 157 GASILCFDEIQTVDVFAIVALSGIVSRLLSTGTVLVATSNRAPWDLNQDGMQREIFQKLV 216
++CFDE Q VD+ + L + L G V+VATSNR P +L ++G+QR F +
Sbjct: 229 -TCLICFDEFQVVDIADAMILKQLFEGLFKCGVVVVATSNRPPEELYKNGLQRAAFVPFI 287
Query: 217 AKLEKHCEIIPIGSEVDYRRLIAQRSIDQVHYF--WPLDDNAVRQL-EAMWCQVTNHFGG 273
L+++C I+ + + +D+R + +++Y P +NAV L E + + +
Sbjct: 288 GVLKEYCRIVSLDTGIDFRTR-EMKPAGRLYYISSEPDAENAVNALFEELAFRQNDVTRP 346
Query: 274 KIISSTIPVMFGRTLEVPQSCNGVARFTFEYLCGRPVGAADYIAVAHNYHTVFITNIPVM 333
++++ GR + + ++C +A +F+ LC +P+GA DY+ +A + TV I N+P +
Sbjct: 347 RVLNVQ-----GREVTLSRTCGTIADCSFQELCEQPLGAGDYLEIARCFDTVIIRNVPYL 401
Query: 334 SMRIRDKARRFITLIDELYNHHCCLFCSAASSIDDLFQGTEEGTLFDLESFQFETEIEGG 393
+ ++D+ARRF TLID Y+ + A + +D L ++G + G
Sbjct: 402 QLGMKDQARRFTTLIDNFYDQKVRVVMLADAPLDRLL---DQGQM-------------TG 445
Query: 394 KLRRDVLAEGTVSSGGAPAGIVSMLSGQEELFAFRRAWFVTVSTL 438
+ RD L + + +++ + EE+FAF+R TVS L
Sbjct: 446 EEARDRLMLDELGLTDEASKRITLFTADEEIFAFQR----TVSRL 486
>sp|P32317|AFG1_YEAST Protein AFG1 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=AFG1 PE=1 SV=1
Length = 509
Score = 163 bits (413), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 133/460 (28%), Positives = 211/460 (45%), Gaps = 78/460 (16%)
Query: 5 VRKNPENVEPGVGRWVSYLN------RERKLDSLVGRCPTAPPAPKGLYLYGNVGSGKTM 58
V K P V+ VG W++ L + + + + V P+G+YLYG+VG GKTM
Sbjct: 76 VVKTPNAVD-QVGGWLNGLKSVFSRGKPKNIGAYVDVSKIGNSIPRGVYLYGDVGCGKTM 134
Query: 59 LMDMFYGATEGIVKHRQRFHFHEAMLKINEHMHRLWKNQVAEKSLRSSISGWITNLPFDS 118
LMD+FY + ++R HFH+ M +++ H + + Q K L + I +PF
Sbjct: 135 LMDLFYTTIPNHLT-KKRIHFHQFMQYVHKRSHEIVREQNL-KELGDAKGKEIDTVPF-- 190
Query: 119 KVMEWVAAEEKYKQEVQMKNILPAVADKFLVDQHADQRGASILCFDEIQTVDVFAIVALS 178
+AAE +A+ + +LCFDE Q DV + L
Sbjct: 191 -----LAAE---------------IAN-----------NSHVLCFDEFQVTDVADAMILR 219
Query: 179 GIVSRLLST--GTVLVATSNRAPWDLNQDGMQREIFQKLVAKLEKHCEIIPIGSEVDYRR 236
+++ LLS G VL ATSNR P +L +G+QR+ F + ++ ++I + S DYR+
Sbjct: 220 RLMTALLSDDYGVVLFATSNRHPDELYINGVQRQSFIPCIELIKHRTKVIFLNSPTDYRK 279
Query: 237 LIAQRSIDQVHYFWPLD--------------DNAVRQLEAMWCQVTNHFGGKIISSTIPV 282
+ R + V+YF P D + +++ + Q + H S T+
Sbjct: 280 I--PRPVSSVYYF-PSDTSIKYASKECKTRRETHIKEWYNYFAQAS-HTDDSTDSHTVHK 335
Query: 283 MF--------GRTLEVPQ-SCNGVARFTFEYLCGRPVGAADYIAVAHNYHTVFITNIPVM 333
F GR +VP+ + VA+FTF+ LCG P+ A DY+ +A N+ +T+IP +
Sbjct: 336 TFYDYPLTIWGREFKVPKCTPPRVAQFTFKQLCGEPLAAGDYLTLAKNFEAFIVTDIPYL 395
Query: 334 SMRIRDKARRFITLIDELYNHHCCLFCSAASSIDDLFQGTEEGTLFDLESFQFETEIEGG 393
S+ +RD+ RRFIT +D +Y+ L + A+ LF E+ L F+ +
Sbjct: 396 SIYVRDEVRRFITFLDAVYDSGGKLATTGAADFSSLFVEPEQI----LNDFELRPTTKEP 451
Query: 394 KLRRDVLAEGTVSSGGAPAGIVS---MLSGQEELFAFRRA 430
+ + V G I M + EE FAF RA
Sbjct: 452 DSVDTGMVDEMVEKHGFSKEIAKKSQMFALDEERFAFARA 491
>sp|P64612|YHCM_ECOLI Uncharacterized protein YhcM OS=Escherichia coli (strain K12)
GN=yhcM PE=1 SV=1
Length = 375
Score = 157 bits (397), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 99/330 (30%), Positives = 160/330 (48%), Gaps = 57/330 (17%)
Query: 44 KGLYLYGNVGSGKTMLMDMFYGATEGIVKHRQRFHFHEAMLKINEHMHRLWKNQVAEKSL 103
+GLY++G VG GKT LMD+FY + G + +QR HFH ML+++E +
Sbjct: 72 RGLYMWGGVGRGKTWLMDLFYQSLPG--ERKQRLHFHRFMLRVHEEL------------- 116
Query: 104 RSSISGWITNLPFDSKVMEWVAAEEKYKQEVQMKNILPAVADKFLVDQHADQRGASILCF 163
+++ G + L +AD+F + +LCF
Sbjct: 117 -TALQG--------------------------QTDPLEIIADRFKAE-------TDVLCF 142
Query: 164 DEIQTVDVFAIVALSGIVSRLLSTGTVLVATSNRAPWDLNQDGMQREIFQKLVAKLEKHC 223
DE D+ + L G++ L + G LVATSN P +L ++G+QR F + +++HC
Sbjct: 143 DEFFVSDITDAMLLGGLMKALFARGITLVATSNIPPDELYRNGLQRARFLPAIDAIKQHC 202
Query: 224 EIIPIGSEVDYRRLIAQRSIDQVH-YFWPLDDNAVRQLEAMWCQVTNHFGGKIISSTIPV 282
+++ + + VDYR R++ Q H + PL D Q++ +W + GGK +S
Sbjct: 203 DVMNVDAGVDYR----LRTLTQAHLWLSPLHDETRAQMDKLWLALA---GGKRENSPTLE 255
Query: 283 MFGRTLEVPQSCNGVARFTFEYLCGRPVGAADYIAVAHNYHTVFITNIPVMSMRIRDKAR 342
+ R L N +F LC DYIA++ +HTV + ++PVM+ + +AR
Sbjct: 256 INHRPLATMGVENQTLAVSFTTLCVDARSQHDYIALSRLFHTVMLFDVPVMTRLMESEAR 315
Query: 343 RFITLIDELYNHHCCLFCSAASSIDDLFQG 372
RFI L+DE Y H L SA + +++QG
Sbjct: 316 RFIALVDEFYERHVKLVVSAEVPLYEIYQG 345
>sp|P64613|YHCM_ECO57 Uncharacterized protein YhcM OS=Escherichia coli O157:H7 GN=yhcM
PE=3 SV=1
Length = 375
Score = 157 bits (397), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 99/330 (30%), Positives = 160/330 (48%), Gaps = 57/330 (17%)
Query: 44 KGLYLYGNVGSGKTMLMDMFYGATEGIVKHRQRFHFHEAMLKINEHMHRLWKNQVAEKSL 103
+GLY++G VG GKT LMD+FY + G + +QR HFH ML+++E +
Sbjct: 72 RGLYMWGGVGRGKTWLMDLFYQSLPG--ERKQRLHFHRFMLRVHEEL------------- 116
Query: 104 RSSISGWITNLPFDSKVMEWVAAEEKYKQEVQMKNILPAVADKFLVDQHADQRGASILCF 163
+++ G + L +AD+F + +LCF
Sbjct: 117 -TALQG--------------------------QTDPLEIIADRFKAE-------TDVLCF 142
Query: 164 DEIQTVDVFAIVALSGIVSRLLSTGTVLVATSNRAPWDLNQDGMQREIFQKLVAKLEKHC 223
DE D+ + L G++ L + G LVATSN P +L ++G+QR F + +++HC
Sbjct: 143 DEFFVSDITDAMLLGGLMKALFARGITLVATSNIPPDELYRNGLQRARFLPAIDAIKQHC 202
Query: 224 EIIPIGSEVDYRRLIAQRSIDQVH-YFWPLDDNAVRQLEAMWCQVTNHFGGKIISSTIPV 282
+++ + + VDYR R++ Q H + PL D Q++ +W + GGK +S
Sbjct: 203 DVMNVDAGVDYR----LRTLTQAHLWLSPLHDETRAQMDKLWLALA---GGKRENSPTLE 255
Query: 283 MFGRTLEVPQSCNGVARFTFEYLCGRPVGAADYIAVAHNYHTVFITNIPVMSMRIRDKAR 342
+ R L N +F LC DYIA++ +HTV + ++PVM+ + +AR
Sbjct: 256 INHRPLATMGVENQTLAVSFTTLCVDARSQHDYIALSRLFHTVMLFDVPVMTRLMESEAR 315
Query: 343 RFITLIDELYNHHCCLFCSAASSIDDLFQG 372
RFI L+DE Y H L SA + +++QG
Sbjct: 316 RFIALVDEFYERHVKLVVSAEVPLYEIYQG 345
>sp|Q3UMC0|SPAT5_MOUSE Spermatogenesis-associated protein 5 OS=Mus musculus GN=Spata5 PE=2
SV=2
Length = 893
Score = 36.6 bits (83), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 29/65 (44%), Gaps = 24/65 (36%)
Query: 41 PAPKGLYLYGNVGSGKTM--------------------LMDMFYGATEGIVKHRQRFHFH 80
PAP+GL LYG G+GKTM ++ FYG TE R R F
Sbjct: 385 PAPRGLLLYGPPGTGKTMIARAVANEVGAYVSVINGPEIISKFYGETEA----RLRQIFA 440
Query: 81 EAMLK 85
EA L+
Sbjct: 441 EATLR 445
>sp|P26361|CFTR_MOUSE Cystic fibrosis transmembrane conductance regulator OS=Mus musculus
GN=Cftr PE=1 SV=2
Length = 1476
Score = 33.1 bits (74), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 23/37 (62%), Gaps = 3/37 (8%)
Query: 46 LYLYGNVGSGKTMLMDMFYG---ATEGIVKHRQRFHF 79
L + G+ GSGKT L+ + G A+EGI+KH R F
Sbjct: 454 LAITGSTGSGKTSLLMLILGELEASEGIIKHSGRVSF 490
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.137 0.419
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 165,198,752
Number of Sequences: 539616
Number of extensions: 6842852
Number of successful extensions: 18226
Number of sequences better than 100.0: 14
Number of HSP's better than 100.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 18182
Number of HSP's gapped (non-prelim): 24
length of query: 454
length of database: 191,569,459
effective HSP length: 121
effective length of query: 333
effective length of database: 126,275,923
effective search space: 42049882359
effective search space used: 42049882359
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 63 (28.9 bits)