Your job contains 1 sequence.
>012883
MNTIENIDENPNQELLTQPPTQTQNQTQSHSRRPRGFAATAAAAAAAAAANNNSNSNNNN
ASSGKGKKEREKEKERTKLRERHRRAITSRMLAGLRQYGNFPLPARADMNDVLAALAREA
GWTVEPDGTTYRLSNQSQSHHHLHQQMAAAAATTTAAFPVRSVESPLSVKNCSVKASVEC
QPSVLRIDESLSPASFDSVVIPERDSRGGEFNASTSPINNSVECLEADQLIQDVRAGEHE
DDFTGTPYIPVYVMLANHVINNFCQLVDPELIRQEISHMKALNVDGVIVNCWWGIVEGWN
PQKYAWSGYRELFNIIREFNLKVQVVMAFHEYGANDSGDAWISLPQWVMEIGKGNQDIFF
TDREGRRNTECLSWGVDKERVLNGRTGIEVYFDFMRSFRTEFDDLFVAGLICAVEIGLGP
SGELKYPSLSERMGWRYPGIGEFQIFTAKSTESR
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 012883
(454 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2158455 - symbol:BMY2 "beta-amylase 2" species... 1250 3.8e-129 2
TAIR|locus:2050720 - symbol:BAM7 "beta-amylase 7" species... 883 2.0e-88 1
TAIR|locus:2127033 - symbol:BAM2 "beta-amylase 2" species... 703 2.4e-69 1
TAIR|locus:2062535 - symbol:BAM6 "beta-amylase 6" species... 564 1.3e-54 1
TAIR|locus:2129810 - symbol:BAM5 "beta-amylase 5" species... 502 4.7e-48 1
TAIR|locus:2130504 - symbol:CT-BMY "chloroplast beta-amyl... 480 1.0e-45 1
TAIR|locus:2076086 - symbol:BAM1 "beta-amylase 1" species... 433 9.6e-41 1
TAIR|locus:2162152 - symbol:BAM4 "beta-amylase 4" species... 393 1.7e-36 1
TAIR|locus:2180029 - symbol:BMY3 "beta-amylase 3" species... 323 1.3e-28 1
TAIR|locus:2037518 - symbol:BEH4 "BES1/BZR1 homolog 4" sp... 160 3.9e-09 1
TAIR|locus:2117154 - symbol:BEH3 "BES1/BZR1 homolog 3" sp... 157 5.5e-09 1
TAIR|locus:2016472 - symbol:BES1 "BRI1-EMS-SUPPRESSOR 1" ... 141 7.2e-07 1
TAIR|locus:2101719 - symbol:BEH1 "BES1/BZR1 homolog 1" sp... 137 1.1e-06 1
TAIR|locus:2037279 - symbol:BZR1 "BRASSINAZOLE-RESISTANT ... 133 5.1e-06 1
>TAIR|locus:2158455 [details] [associations]
symbol:BMY2 "beta-amylase 2" species:3702 "Arabidopsis
thaliana" [GO:0000272 "polysaccharide catabolic process"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005975 "carbohydrate
metabolic process" evidence=IEA] [GO:0016161 "beta-amylase
activity" evidence=IEA;ISS;IDA] [GO:0043169 "cation binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0048831 "regulation of shoot system development"
evidence=IMP] InterPro:IPR001554 InterPro:IPR013781 Pfam:PF01373
PRINTS:PR00750 PROSITE:PS00506 PROSITE:PS00679 GO:GO:0005634
GO:GO:0005737 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0043169
Gene3D:3.20.20.80 InterPro:IPR017853 SUPFAM:SSF51445 GO:GO:0000272
GO:GO:0003700 EMBL:AB020744 GO:GO:0048831 CAZy:GH14
HOGENOM:HOG000238755 GO:GO:0016161 InterPro:IPR008540 Pfam:PF05687
EMBL:AK117140 EMBL:BT006482 IPI:IPI00517397 IPI:IPI00656647
RefSeq:NP_001032014.1 RefSeq:NP_199343.1 UniGene:At.30019
HSSP:P10537 ProteinModelPortal:Q9FH80 SMR:Q9FH80 IntAct:Q9FH80
PaxDb:Q9FH80 PRIDE:Q9FH80 EnsemblPlants:AT5G45300.1 GeneID:834566
KEGG:ath:AT5G45300 TAIR:At5g45300 eggNOG:NOG242783
InParanoid:Q9FH80 OMA:MAFHEYG PhylomeDB:Q9FH80 ProtClustDB:PLN02705
Genevestigator:Q9FH80 Uniprot:Q9FH80
Length = 689
Score = 1250 (445.1 bits), Expect = 3.8e-129, Sum P(2) = 3.8e-129
Identities = 249/365 (68%), Positives = 284/365 (77%)
Query: 86 AITSRMLAGLRQYGNFPLPARADMNDVLAALAREAGWTVEPDGTTYRXXXXXXXXXXXXX 145
AITSRMLAGLRQYGNFPLPARADMNDV+AALAREAGW+VE DGTTYR
Sbjct: 105 AITSRMLAGLRQYGNFPLPARADMNDVIAALAREAGWSVEADGTTYRQSQQPNHVVQ--- 161
Query: 146 XMXXXXXXXXXXFPVRSVESPLS---VKNCSVKASVECQP-SVLRIDESLSPASFDSVVI 201
FP RS+ESPLS +KNC+ KA++E Q SVLR DE L+P S DS+ I
Sbjct: 162 ------------FPTRSIESPLSSSTLKNCA-KAAIESQQHSVLRNDEKLAPVSLDSIGI 208
Query: 202 PERDSRGGEFNASTSPINNSVECLEADQLIQDVRAGEHEDDFTGTPYIPVYVMLANHVIN 261
E D G S SPI SV CLEA+QLIQDV + E +DFT + Y+PVY ML +I+
Sbjct: 209 AESDHPGNGRYTSVSPIT-SVGCLEANQLIQDVHSAEQCNDFTESFYVPVYAMLPVGIID 267
Query: 262 NFCQLVDPELIRQEISHMKALNVDGVIVNCWWGIVEGWNPQKYAWSGYRELFNIIREFNL 321
NF QLVDPE +RQE+S+MK+LNVDGV+++CWWGIVEGWNPQKY WSGYRELFN+IR+F L
Sbjct: 268 NFGQLVDPEGVRQELSYMKSLNVDGVVIDCWWGIVEGWNPQKYVWSGYRELFNLIRDFKL 327
Query: 322 KVQVVMAFHEYGANDSGDAWISLPQWVMEIGKGNQDIFFTDREGRRNTECLSWGVDKERV 381
K+QVVMAFHEYG N SG+ ISLPQWV++IGK N DIFFTDREGRR+ ECL+W +DKERV
Sbjct: 328 KLQVVMAFHEYGGNASGNVMISLPQWVLKIGKDNPDIFFTDREGRRSFECLNWSIDKERV 387
Query: 382 LNGRTGIEVYFDFMRSFRTEFDDLFVAGLICAVEIGLGPSGELKYPSLSERMGWRYPGIG 441
L+GRTGIEVYFDFMRSFR+EFDDLFV GLI AVEIGLG SGELKYPS ERMGW YPGIG
Sbjct: 388 LHGRTGIEVYFDFMRSFRSEFDDLFVEGLITAVEIGLGASGELKYPSFPERMGWIYPGIG 447
Query: 442 EFQIF 446
EFQ +
Sbjct: 448 EFQCY 452
Score = 38 (18.4 bits), Expect = 3.8e-129, Sum P(2) = 3.8e-129
Identities = 7/7 (100%), Positives = 7/7 (100%)
Query: 31 SRRPRGF 37
SRRPRGF
Sbjct: 38 SRRPRGF 44
>TAIR|locus:2050720 [details] [associations]
symbol:BAM7 "beta-amylase 7" species:3702 "Arabidopsis
thaliana" [GO:0000272 "polysaccharide catabolic process"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005975 "carbohydrate
metabolic process" evidence=IEA] [GO:0016161 "beta-amylase
activity" evidence=IEA;ISS;IDA] [GO:0043169 "cation binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0048831 "regulation of shoot system development"
evidence=IMP] [GO:0010048 "vernalization response" evidence=RCA]
InterPro:IPR001554 InterPro:IPR013781 InterPro:IPR018238
Pfam:PF01373 PRINTS:PR00750 PROSITE:PS00506 PROSITE:PS00679
GO:GO:0005634 GO:GO:0005737 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0043169 Gene3D:3.20.20.80 InterPro:IPR017853 SUPFAM:SSF51445
GO:GO:0000272 GO:GO:0003700 GO:GO:0048831 EMBL:AC004665 CAZy:GH14
HOGENOM:HOG000238755 GO:GO:0016161 eggNOG:NOG274372 HSSP:P10538
EMBL:AK227323 IPI:IPI00543929 PIR:T02459 RefSeq:NP_182112.2
UniGene:At.36579 ProteinModelPortal:O80831 SMR:O80831 PaxDb:O80831
PRIDE:O80831 EnsemblPlants:AT2G45880.1 GeneID:819196
KEGG:ath:AT2G45880 TAIR:At2g45880 InParanoid:Q0WU61 OMA:PVARENS
PhylomeDB:O80831 ProtClustDB:PLN02905 Genevestigator:O80831
InterPro:IPR008540 Pfam:PF05687 Uniprot:O80831
Length = 691
Score = 883 (315.9 bits), Expect = 2.0e-88, P = 2.0e-88
Identities = 170/361 (47%), Positives = 235/361 (65%)
Query: 86 AITSRMLAGLRQYGNFPLPARADMNDVLAALAREAGWTVEPDGTTYRXXXXXXXXXXXXX 145
AIT+R+L GLR++GN+ L RAD+NDV+AALAREAGW V PDGTT+
Sbjct: 88 AITARILGGLRRHGNYNLRVRADINDVIAALAREAGWVVLPDGTTFPSKSQGTKPTGGSS 147
Query: 146 XMXXXXXXXXXXFPVRSVESPLSVKNCSVKASVECQPSVLRIDESLSPASFDSVVIPERD 205
+ S + L V + +++ VE ++ + +P+ +D + I +
Sbjct: 148 AVAAGSSASHIASQQTSPPA-LRVVSSGLRSPVELSSCRMKGVFTPAPSPYDMLPI-QSP 205
Query: 206 SRGGEFNASTSPINNSVECLEADQLIQDVRAGEHEDDFTGTPYIPVYVMLANHVINNFCQ 265
G N + + SV+ + + Q+++ + E DF+GTPY+PVYVML VIN C+
Sbjct: 206 ELVGSVNKAEGLVGCSVDVINSKQILE-IPPNLTEQDFSGTPYVPVYVMLPLGVINMKCE 264
Query: 266 LVDPELIRQEISHMKALNVDGVIVNCWWGIVEGWNPQKYAWSGYRELFNIIREFNLKVQV 325
L D + + + + +K+++VDGV V+CWWGIVEG +PQ+Y W+GYR+LF ++R+ NLK+QV
Sbjct: 265 LADRDGLLKHLRILKSIHVDGVKVDCWWGIVEGHSPQEYNWTGYRQLFQMVRDLNLKIQV 324
Query: 326 VMAFHEYGANDSGDAWISLPQWVMEIGKGNQDIFFTDREGRRNTECLSWGVDKERVLNGR 385
+M+FHE G N D I LP WV EIG+ N DI+FTDREGRRN ECLSWG+DKER+L GR
Sbjct: 325 LMSFHECGGNVGDDVCIPLPHWVAEIGRTNPDIYFTDREGRRNPECLSWGIDKERILRGR 384
Query: 386 TGIEVYFDFMRSFRTEFDDLFVAGLICAVEIGLGPSGELKYPSLSERMGWRYPGIGEFQI 445
T +EVYFD+MRSFR E + G+I VEIGLGP GEL+YPS + GWRYPG+GEFQ
Sbjct: 385 TALEVYFDYMRSFRIELAEFLEDGVISMVEIGLGPCGELRYPSCPIKHGWRYPGVGEFQC 444
Query: 446 F 446
+
Sbjct: 445 Y 445
>TAIR|locus:2127033 [details] [associations]
symbol:BAM2 "beta-amylase 2" species:3702 "Arabidopsis
thaliana" [GO:0000272 "polysaccharide catabolic process"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005975 "carbohydrate
metabolic process" evidence=IEA] [GO:0016161 "beta-amylase
activity" evidence=IEA;ISS;IDA] [GO:0043169 "cation binding"
evidence=IEA] [GO:0009507 "chloroplast" evidence=IDA] [GO:0009570
"chloroplast stroma" evidence=IDA] [GO:0000023 "maltose metabolic
process" evidence=RCA] [GO:0019252 "starch biosynthetic process"
evidence=RCA] InterPro:IPR001371 InterPro:IPR001554
InterPro:IPR013781 InterPro:IPR018238 Pfam:PF01373 PRINTS:PR00750
PRINTS:PR00842 PROSITE:PS00506 PROSITE:PS00679 GO:GO:0009570
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0043169
Gene3D:3.20.20.80 InterPro:IPR017853 SUPFAM:SSF51445 GO:GO:0000272
EMBL:AF058919 EMBL:AL161472 HSSP:P16098 CAZy:GH14
HOGENOM:HOG000238755 KO:K01177 GO:GO:0016161 IPI:IPI00525144
PIR:T01213 RefSeq:NP_191958.3 UniGene:At.27432 UniGene:At.68473
ProteinModelPortal:O65258 SMR:O65258 PaxDb:O65258 PRIDE:O65258
EnsemblPlants:AT4G00490.1 GeneID:827959 KEGG:ath:AT4G00490
TAIR:At4g00490 eggNOG:NOG274372 InParanoid:O65258 OMA:RYPSYPA
ProtClustDB:CLSN2920283 Genevestigator:O65258 Uniprot:O65258
Length = 542
Score = 703 (252.5 bits), Expect = 2.4e-69, P = 2.4e-69
Identities = 126/230 (54%), Positives = 166/230 (72%)
Query: 217 PINNSVECLEADQLIQDVRAGEHEDDFTGTPYIPVYVMLANHVINNFCQLVDPELIRQEI 276
PI++ + DQL+ + E DF GT +PVYVML VI+ ++V+PE + ++
Sbjct: 65 PIDDDDD--STDQLVDEEIVHFEERDFAGTACVPVYVMLPLGVIDMNSEVVEPEELLDQL 122
Query: 277 SHMKALNVDGVIVNCWWGIVEGWNPQKYAWSGYRELFNIIREFNLKVQVVMAFHEYGAND 336
+K++NVDGV+V+CWWGIVE PQ Y WSGY++LF +IRE LK+QVVM+FHE G N
Sbjct: 123 RTLKSVNVDGVMVDCWWGIVESHTPQVYNWSGYKKLFQMIRELGLKIQVVMSFHECGGNV 182
Query: 337 SGDAWISLPQWVMEIGKGNQDIFFTDREGRRNTECLSWGVDKERVLNGRTGIEVYFDFMR 396
D I +P+WV EIG+ N DI+FTD GRRNTECL+WG+DK+RVL GRT +EVYFD+MR
Sbjct: 183 GDDVHIQIPEWVREIGQSNPDIYFTDSAGRRNTECLTWGIDKQRVLRGRTALEVYFDYMR 242
Query: 397 SFRTEFDDLFVAGLICAVEIGLGPSGELKYPSLSERMGWRYPGIGEFQIF 446
SFR EFD+ F +I +E+GLGP GEL+YPS + GW+YPGIGEFQ +
Sbjct: 243 SFRVEFDEFFEEKIIPEIEVGLGPCGELRYPSYPAQFGWKYPGIGEFQCY 292
>TAIR|locus:2062535 [details] [associations]
symbol:BAM6 "beta-amylase 6" species:3702 "Arabidopsis
thaliana" [GO:0000272 "polysaccharide catabolic process"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA] [GO:0016161
"beta-amylase activity" evidence=IEA;ISS] [GO:0043169 "cation
binding" evidence=IEA] [GO:0009507 "chloroplast" evidence=IDA]
InterPro:IPR001371 InterPro:IPR001554 InterPro:IPR013781
InterPro:IPR018238 Pfam:PF01373 PRINTS:PR00750 PRINTS:PR00842
PROSITE:PS00506 PROSITE:PS00679 GO:GO:0009507 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0043169 Gene3D:3.20.20.80
InterPro:IPR017853 SUPFAM:SSF51445 GO:GO:0000272 EMBL:AC005700
CAZy:GH14 HOGENOM:HOG000238755 GO:GO:0016161 HSSP:P10538
eggNOG:NOG322510 ProtClustDB:PLN02801 EMBL:AY136463 IPI:IPI00524134
PIR:C84731 RefSeq:NP_180788.2 UniGene:At.38097 UniGene:At.38099
ProteinModelPortal:Q8L762 SMR:Q8L762 PaxDb:Q8L762 PRIDE:Q8L762
EnsemblPlants:AT2G32290.1 GeneID:817789 KEGG:ath:AT2G32290
TAIR:At2g32290 InParanoid:Q8L762 OMA:RENMEDF PhylomeDB:Q8L762
Genevestigator:Q8L762 Uniprot:Q8L762
Length = 577
Score = 564 (203.6 bits), Expect = 1.3e-54, P = 1.3e-54
Identities = 102/208 (49%), Positives = 140/208 (67%)
Query: 239 HEDDFTGTPYIPVYVMLANHVINNFCQLVDPELIRQEISHMKALNVDGVIVNCWWGIVEG 298
+ED T Y+PVYVML VI N L + E +++++ +K VDGV+V+ WWGIVE
Sbjct: 69 YEDKML-TNYVPVYVMLQLGVITNDNVLENEESLKKQLKKLKQSQVDGVMVDVWWGIVES 127
Query: 299 WNPQKYAWSGYRELFNIIREFNLKVQVVMAFHEYGANDSGDAWISLPQWVMEIGKGNQDI 358
P++Y WS YR LF I++ F LK+Q +M+FH G N D I +P+WV+EIG N DI
Sbjct: 128 KGPKQYQWSAYRNLFAIVQSFGLKLQAIMSFHRCGGNIGDDVNIPIPKWVLEIGDSNPDI 187
Query: 359 FFTDREGRRNTECLSWGVDKERVLNGRTGIEVYFDFMRSFRTEFDDLFVAGLICAVEIGL 418
F+T++ G RN ECLS VD + GRT +E+Y D+M+SFR +D +G+I +E+GL
Sbjct: 188 FYTNKSGNRNKECLSLSVDNLSLFRGRTAVEMYRDYMKSFRENMEDFISSGVIIDIEVGL 247
Query: 419 GPSGELKYPSLSERMGWRYPGIGEFQIF 446
GP+GEL+YPS SE GW +PGIGEFQ +
Sbjct: 248 GPAGELRYPSYSETQGWVFPGIGEFQCY 275
>TAIR|locus:2129810 [details] [associations]
symbol:BAM5 "beta-amylase 5" species:3702 "Arabidopsis
thaliana" [GO:0000272 "polysaccharide catabolic process"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005975 "carbohydrate
metabolic process" evidence=IEA] [GO:0009507 "chloroplast"
evidence=ISM] [GO:0016161 "beta-amylase activity"
evidence=IEA;ISS;IDA] [GO:0043169 "cation binding" evidence=IEA]
[GO:0080027 "response to herbivore" evidence=IEP] [GO:0005829
"cytosol" evidence=IDA] [GO:0005983 "starch catabolic process"
evidence=IDA] InterPro:IPR001371 InterPro:IPR001554
InterPro:IPR013781 InterPro:IPR018238 Pfam:PF01373 PRINTS:PR00750
PRINTS:PR00842 PROSITE:PS00506 PROSITE:PS00679 GO:GO:0005829
EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:Z97338 GO:GO:0043169
Gene3D:3.20.20.80 InterPro:IPR017853 SUPFAM:SSF51445 GO:GO:0005983
EMBL:AL161540 CAZy:GH14 HOGENOM:HOG000238755 GO:GO:0016161
EMBL:M73467 EMBL:D43783 EMBL:S77076 EMBL:AF424573 EMBL:AY142024
EMBL:AK316869 EMBL:AK226353 IPI:IPI00517770 IPI:IPI00532891
PIR:B71416 RefSeq:NP_567460.1 RefSeq:NP_849389.1 UniGene:At.25187
ProteinModelPortal:P25853 SMR:P25853 STRING:P25853 PaxDb:P25853
PRIDE:P25853 EnsemblPlants:AT4G15210.1 GeneID:827185
KEGG:ath:AT4G15210 TAIR:At4g15210 eggNOG:NOG322510
InParanoid:P25853 OMA:RYPSYPQ PhylomeDB:P25853 ProtClustDB:PLN02801
Genevestigator:P25853 GO:GO:0080027 Uniprot:P25853
Length = 498
Score = 502 (181.8 bits), Expect = 4.7e-48, P = 4.7e-48
Identities = 89/200 (44%), Positives = 130/200 (65%)
Query: 248 YIPVYVMLANHVINNFCQLVDPELIRQEISHMKA-LNVDGVIVNCWWGIVEGWNPQKYAW 306
Y+PVYVML V+N DPE + ++ +K VDGV+V+ WWGI+E P++Y W
Sbjct: 13 YVPVYVMLPLGVVNVENVFADPETLETQLKRLKEEAGVDGVMVDVWWGIIESKGPKQYDW 72
Query: 307 SGYRELFNIIREFNLKVQVVMAFHEYGANDSGDAWISLPQWVMEIGKGNQDIFFTDREGR 366
+ Y+ LF +I LK+Q +M+FH+ G N I +PQWV ++G + DI++T+R+G
Sbjct: 73 TAYKTLFQLIARLGLKIQAIMSFHQCGGNVGDIVTIPIPQWVRDVGDNDPDIYYTNRKGT 132
Query: 367 RNTECLSWGVDKERVLNGRTGIEVYFDFMRSFRTEFDDLFVAGLICAVEIGLGPSGELKY 426
R+ E LS GVD + GRT +++Y D+M SF+ DL AG+I +E+GLGP+GEL+Y
Sbjct: 133 RDIEYLSIGVDNLPLFAGRTAVQLYSDYMSSFKENMADLIEAGVIVDIEVGLGPAGELRY 192
Query: 427 PSLSERMGWRYPGIGEFQIF 446
PS + GW +PGIGEFQ +
Sbjct: 193 PSYPQSQGWVFPGIGEFQCY 212
>TAIR|locus:2130504 [details] [associations]
symbol:CT-BMY "chloroplast beta-amylase" species:3702
"Arabidopsis thaliana" [GO:0000272 "polysaccharide catabolic
process" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0005975 "carbohydrate metabolic process"
evidence=IEA] [GO:0009507 "chloroplast" evidence=ISM] [GO:0016161
"beta-amylase activity" evidence=IEA;ISS;IDA] [GO:0043169 "cation
binding" evidence=IEA] [GO:0005983 "starch catabolic process"
evidence=IMP;TAS] [GO:0009570 "chloroplast stroma" evidence=IDA]
[GO:0009409 "response to cold" evidence=IEP] [GO:0000024 "maltose
biosynthetic process" evidence=IMP] BRENDA:3.2.1.2
InterPro:IPR001371 InterPro:IPR001554 InterPro:IPR013781
InterPro:IPR018238 Pfam:PF01373 PRINTS:PR00750 PRINTS:PR00842
PROSITE:PS00506 PROSITE:PS00679 GO:GO:0009570 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0043169 Gene3D:3.20.20.80
InterPro:IPR017853 SUPFAM:SSF51445 GO:GO:0009409 GO:GO:0005983
CAZy:GH14 eggNOG:NOG77898 HOGENOM:HOG000238755 KO:K01177
GO:GO:0016161 EMBL:AJ250341 EMBL:Z97342 EMBL:AL161545 EMBL:AY052315
EMBL:AY061898 EMBL:AY087592 IPI:IPI00524115 PIR:D71439 PIR:H85190
PIR:T52556 RefSeq:NP_567523.1 UniGene:At.22021 UniGene:At.23528
UniGene:At.47944 UniGene:At.67939 HSSP:P10538
ProteinModelPortal:O23553 SMR:O23553 STRING:O23553 PaxDb:O23553
PRIDE:O23553 EnsemblPlants:AT4G17090.1 GeneID:827419
KEGG:ath:AT4G17090 TAIR:At4g17090 InParanoid:Q9SMW0 OMA:EHANCSP
ProtClustDB:PLN02803 BioCyc:ARA:AT4G17090-MONOMER
BioCyc:MetaCyc:AT4G17090-MONOMER Genevestigator:O23553
GO:GO:0000024 Uniprot:O23553
Length = 548
Score = 480 (174.0 bits), Expect = 1.0e-45, P = 1.0e-45
Identities = 90/199 (45%), Positives = 124/199 (62%)
Query: 249 IPVYVMLANHVINNFCQLVDPELIRQEISHMKALNVDGVIVNCWWGIVEGWNPQKYAWSG 308
+PV+VML + L P + + +K V+GV+V+ WWG+VE P Y W G
Sbjct: 86 VPVFVMLPLDTVTMSGHLNKPRAMNASLMALKGAGVEGVMVDAWWGLVEKDGPMNYNWEG 145
Query: 309 YRELFNIIREFNLKVQVVMAFHEYGANDSGDAWISLPQWVMEIGKGNQDIFFTDREGRRN 368
Y EL ++++ LK+QVVM+FH+ G N I LP WV+E N D+ +TD+ GRRN
Sbjct: 146 YAELIQMVQKHGLKLQVVMSFHQCGGNVGDSCSIPLPPWVLEEISKNPDLVYTDKSGRRN 205
Query: 369 TECLSWGVDKERVLNGRTGIEVYFDFMRSFRTEFDDLFVAGLICAVEIGLGPSGELKYPS 428
E +S G D VL GRT I+VY DFMRSFR F+ ++ G+I +++G+GP GEL+YPS
Sbjct: 206 PEYISLGCDSVPVLRGRTPIQVYSDFMRSFRERFEG-YIGGVIAEIQVGMGPCGELRYPS 264
Query: 429 LSERMG-WRYPGIGEFQIF 446
E G WR+PGIGEFQ +
Sbjct: 265 YPESNGTWRFPGIGEFQCY 283
>TAIR|locus:2076086 [details] [associations]
symbol:BAM1 "beta-amylase 1" species:3702 "Arabidopsis
thaliana" [GO:0000272 "polysaccharide catabolic process"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA]
[GO:0009507 "chloroplast" evidence=ISM] [GO:0016161 "beta-amylase
activity" evidence=IEA;ISS;IDA] [GO:0043169 "cation binding"
evidence=IEA] [GO:0005983 "starch catabolic process" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0009414 "response to water deprivation"
evidence=IEP] BRENDA:3.2.1.2 InterPro:IPR001371 InterPro:IPR001554
InterPro:IPR013781 InterPro:IPR018238 Pfam:PF01373 PRINTS:PR00750
PRINTS:PR00842 PROSITE:PS00506 PROSITE:PS00679 GO:GO:0005829
GO:GO:0005634 GO:GO:0009507 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0043169 Gene3D:3.20.20.80 InterPro:IPR017853 SUPFAM:SSF51445
GO:GO:0009414 GO:GO:0005983 EMBL:AP001297 EMBL:AF367293
EMBL:AY074393 EMBL:AY078046 EMBL:AY096517 EMBL:AK226274
IPI:IPI00518242 RefSeq:NP_189034.1 UniGene:At.8278 HSSP:P16098
ProteinModelPortal:Q9LIR6 SMR:Q9LIR6 STRING:Q9LIR6 CAZy:GH14
PaxDb:Q9LIR6 PRIDE:Q9LIR6 EnsemblPlants:AT3G23920.1 GeneID:821975
KEGG:ath:AT3G23920 TAIR:At3g23920 eggNOG:NOG77898
HOGENOM:HOG000238755 InParanoid:Q9LIR6 KO:K01177 OMA:MGNTIVE
ProtClustDB:PLN00197 BioCyc:MetaCyc:AT3G23920-MONOMER
Genevestigator:Q9LIR6 GO:GO:0016161 Uniprot:Q9LIR6
Length = 575
Score = 433 (157.5 bits), Expect = 9.6e-41, P = 9.6e-41
Identities = 86/237 (36%), Positives = 137/237 (57%)
Query: 218 INNSVECLEADQLIQDVRAGEHEDDFTGTPYIPVYVMLANHVINNFCQLVDPELIRQEIS 277
+ N + +E + ++ G ++ G +PV+VM+ + + + ++ +
Sbjct: 78 VENGIGTIEEQRTYREGGIGGKKEGGGG---VPVFVMMPLDSVTMGNTVNRRKAMKASLQ 134
Query: 278 HMKALNVDGVIVNCWWGIVEGWNPQKYAWSGYRELFNIIREFNLKVQVVMAFHEYGANDS 337
+K+ V+G++++ WWG+VE +P Y W GY EL + ++ LKVQ VM+FH+ G N
Sbjct: 135 ALKSAGVEGIMIDVWWGLVEKESPGTYNWGGYNELLELAKKLGLKVQAVMSFHQCGGNVG 194
Query: 338 GDAWISLPQWVMEIGKGNQDIFFTDREGRRNTECLSWGVDKERVLNGRTGIEVYFDFMRS 397
I LPQWV+E + D+ +TD+ GRRN E +S G D VL GRT ++ Y DFMR+
Sbjct: 195 DSVTIPLPQWVVEEVDKDPDLAYTDQWGRRNHEYISLGADTLPVLKGRTPVQCYADFMRA 254
Query: 398 FRTEFDDLFVAGLICAVEIGLGPSGELKYPSLSERMG-WRYPGIGEFQIFTAKSTES 453
FR F L + I +++G+GP+GEL+YPS E+ G W++PGIG FQ + S S
Sbjct: 255 FRDNFKHL-LGETIVEIQVGMGPAGELRYPSYPEQEGTWKFPGIGAFQCYDKYSLSS 310
>TAIR|locus:2162152 [details] [associations]
symbol:BAM4 "beta-amylase 4" species:3702 "Arabidopsis
thaliana" [GO:0000272 "polysaccharide catabolic process"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA]
[GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0016161
"beta-amylase activity" evidence=IEA;ISS;IDA] [GO:0043169 "cation
binding" evidence=IEA] [GO:0005983 "starch catabolic process"
evidence=IMP] [GO:0006914 "autophagy" evidence=RCA]
InterPro:IPR001371 InterPro:IPR001554 InterPro:IPR013781
Pfam:PF01373 PRINTS:PR00750 PRINTS:PR00842 PROSITE:PS00506
PROSITE:PS00679 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0009507 GO:GO:0003824 GO:GO:0043169 Gene3D:3.20.20.80
InterPro:IPR017853 SUPFAM:SSF51445 GO:GO:0005983 HSSP:P16098
CAZy:GH14 HOGENOM:HOG000238755 EMBL:AB009050 EMBL:AY045834
EMBL:BT001909 EMBL:AK317617 IPI:IPI00546276 RefSeq:NP_568829.2
UniGene:At.49179 UniGene:At.71092 ProteinModelPortal:Q9FM68
SMR:Q9FM68 STRING:Q9FM68 PRIDE:Q9FM68 EnsemblPlants:AT5G55700.1
GeneID:835664 KEGG:ath:AT5G55700 TAIR:At5g55700 eggNOG:NOG249830
InParanoid:Q9FM68 OMA:DAREKSR PhylomeDB:Q9FM68 ProtClustDB:PLN02161
Genevestigator:Q9FM68 Uniprot:Q9FM68
Length = 531
Score = 393 (143.4 bits), Expect = 1.7e-36, P = 1.7e-36
Identities = 80/201 (39%), Positives = 118/201 (58%)
Query: 249 IPVYVMLANHVIN---NFCQLVDP-ELIRQEISHMKALNVDGVIVNCWWGIVEGWNPQKY 304
+PV+VM+ + C + + + + +K V G+ V WWGIVE ++P ++
Sbjct: 92 VPVFVMMPIDTFGIDASGCPKIKRLKALTVSLKALKLAGVHGIAVEVWWGIVERFSPLEF 151
Query: 305 AWSGYRELFNIIREFNLKVQVVMAFHEYGANDSGDAWISLPQWVMEIGKGNQDIFFTDRE 364
WS Y ELF +I E LK+ V + FH G ISLP W+ EIG N+DI++ D+
Sbjct: 152 KWSLYEELFRLISEAGLKLHVALCFHSNMHLFGGKGGISLPLWIREIGDVNKDIYYRDKS 211
Query: 365 GRRNTECLSWGVDKERVLNGRTGIEVYFDFMRSFRTEFDDLFVAGLICAVEIGLGPSGEL 424
G N + L+ GVD+ + GRT ++ Y DFM SF T+F+ ++ +I + IGLGPSGEL
Sbjct: 212 GFSNNDYLTLGVDQLPLFGGRTAVQCYEDFMLSFSTKFEP-YLGNVIEEISIGLGPSGEL 270
Query: 425 KYPSLSERMG-WRYPGIGEFQ 444
+YP+ G W++PGIGEFQ
Sbjct: 271 RYPAHPSGDGRWKFPGIGEFQ 291
>TAIR|locus:2180029 [details] [associations]
symbol:BMY3 "beta-amylase 3" species:3702 "Arabidopsis
thaliana" [GO:0000272 "polysaccharide catabolic process"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA]
[GO:0009507 "chloroplast" evidence=ISM] [GO:0016161 "beta-amylase
activity" evidence=IEA;ISS] [GO:0043169 "cation binding"
evidence=IEA] InterPro:IPR001554 InterPro:IPR013781 Pfam:PF01373
PRINTS:PR00750 PROSITE:PS00506 PROSITE:PS00679 GO:GO:0005737
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0043169
Gene3D:3.20.20.80 InterPro:IPR017853 SUPFAM:SSF51445 GO:GO:0000272
EMBL:AC051627 CAZy:GH14 HOGENOM:HOG000238755 GO:GO:0016161
HSSP:P10537 EMBL:AF402598 EMBL:AY069879 EMBL:AY142007 EMBL:AY087036
IPI:IPI00528458 RefSeq:NP_197368.1 UniGene:At.19910
ProteinModelPortal:Q8VYW2 SMR:Q8VYW2 STRING:Q8VYW2 PaxDb:Q8VYW2
PRIDE:Q8VYW2 EnsemblPlants:AT5G18670.1 GeneID:831985
KEGG:ath:AT5G18670 TAIR:At5g18670 eggNOG:NOG304269
InParanoid:Q8VYW2 OMA:GNPLWGL PhylomeDB:Q8VYW2
ProtClustDB:CLSN2916428 Genevestigator:Q8VYW2 Uniprot:Q8VYW2
Length = 536
Score = 323 (118.8 bits), Expect = 1.3e-28, P = 1.3e-28
Identities = 72/199 (36%), Positives = 113/199 (56%)
Query: 249 IPVYVMLANHVINNFCQLVDP-ELIRQEISHMKALNVDGVIVNCWWGIVEGWNPQKYAWS 307
+ ++V L +++ C V+ + I + +K L V+G+ + +WG+VE KY WS
Sbjct: 87 VKLFVGLPLDTVSD-CNNVNHLKAITAGLKALKLLGVEGIELPIFWGVVEKEAAGKYEWS 145
Query: 308 GYRELFNIIREFNLKVQVVMAFHEYGANDSGDAWISLPQWVMEIGKGNQDIFFTDREGRR 367
GY + I+++ LK+ ++FH G+ + I LP WV +IG I+FTDR G++
Sbjct: 146 GYLAVAEIVKKVGLKLHASLSFH--GSKQTE---IGLPDWVAKIGDAEPGIYFTDRYGQQ 200
Query: 368 NTECLSWGVDKERVLNGRTGIEVYFDFMRSFRTEFDDLFVAGLICAVEIGLGPSGELKYP 427
+CLS+ VD VL+G+T +EVY F SF++ F D ++ I + +GLGP GELKYP
Sbjct: 201 YKDCLSFAVDDVPVLDGKTPMEVYRGFCESFKSAFAD-YMGNTITGITLGLGPDGELKYP 259
Query: 428 SLSERMGWRYPGIGEFQIF 446
S + G GEFQ +
Sbjct: 260 SHQHNA--KLSGAGEFQCY 276
>TAIR|locus:2037518 [details] [associations]
symbol:BEH4 "BES1/BZR1 homolog 4" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008150 "biological_process" evidence=ND] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0006355 EMBL:AC005679
InterPro:IPR008540 Pfam:PF05687 HOGENOM:HOG000238930
ProtClustDB:CLSN2689304 EMBL:AY050430 EMBL:AY090331 IPI:IPI00525439
PIR:H96815 RefSeq:NP_565187.1 UniGene:At.10891 PRIDE:Q9ZV88
EnsemblPlants:AT1G78700.1 GeneID:844206 KEGG:ath:AT1G78700
TAIR:At1g78700 eggNOG:NOG259864 InParanoid:Q9ZV88 OMA:IHEECAS
PhylomeDB:Q9ZV88 Genevestigator:Q9ZV88 GermOnline:AT1G78700
Uniprot:Q9ZV88
Length = 325
Score = 160 (61.4 bits), Expect = 3.9e-09, P = 3.9e-09
Identities = 29/47 (61%), Positives = 34/47 (72%)
Query: 86 AITSRMLAGLRQYGNFPLPARADMNDVLAALAREAGWTVEPDGTTYR 132
AI +++ GLR YGN+ LP D N+VL AL EAGW VEPDGTTYR
Sbjct: 25 AIAAKIFTGLRMYGNYELPKHCDNNEVLKALCNEAGWIVEPDGTTYR 71
>TAIR|locus:2117154 [details] [associations]
symbol:BEH3 "BES1/BZR1 homolog 3" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008150 "biological_process" evidence=ND] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009414 "response to water deprivation" evidence=RCA]
[GO:0009737 "response to abscisic acid stimulus" evidence=RCA]
[GO:0042538 "hyperosmotic salinity response" evidence=RCA]
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0006355 EMBL:AL021711
EMBL:AL161549 InterPro:IPR008540 Pfam:PF05687 HOGENOM:HOG000238930
EMBL:AK118850 EMBL:AY088379 IPI:IPI00541703 PIR:T05026
RefSeq:NP_193624.1 UniGene:At.32859 PRIDE:O49404
EnsemblPlants:AT4G18890.1 GeneID:827623 KEGG:ath:AT4G18890
TAIR:At4g18890 eggNOG:NOG270649 InParanoid:O49404 OMA:GERIHED
PhylomeDB:O49404 ProtClustDB:CLSN2689304 Genevestigator:O49404
GermOnline:AT4G18890 Uniprot:O49404
Length = 284
Score = 157 (60.3 bits), Expect = 5.5e-09, P = 5.5e-09
Identities = 30/47 (63%), Positives = 35/47 (74%)
Query: 86 AITSRMLAGLRQYGNFPLPARADMNDVLAALAREAGWTVEPDGTTYR 132
AI +++ AGLR +GNF LP D N+VL AL EAGWTVE DGTTYR
Sbjct: 25 AIAAKIFAGLRIHGNFKLPKHCDNNEVLKALCNEAGWTVEDDGTTYR 71
>TAIR|locus:2016472 [details] [associations]
symbol:BES1 "BRI1-EMS-SUPPRESSOR 1" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0009742 "brassinosteroid mediated signaling pathway"
evidence=IGI] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0003677 "DNA binding" evidence=IDA] EMBL:CP002684
GO:GO:0005829 GO:GO:0009742 GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 InterPro:IPR008540 Pfam:PF05687 KO:K14503
IPI:IPI00533891 RefSeq:NP_973863.1 UniGene:At.24276
ProteinModelPortal:F4HP45 PRIDE:F4HP45 EnsemblPlants:AT1G19350.3
GeneID:838518 KEGG:ath:AT1G19350 OMA:ATPYSSH Uniprot:F4HP45
Length = 357
Score = 141 (54.7 bits), Expect = 7.2e-07, P = 7.2e-07
Identities = 45/139 (32%), Positives = 61/139 (43%)
Query: 86 AITSRMLAGLRQYGNFPLPARADMNDVLAALAREAGWTVEPDGTTYRXXXXXXXXXXXXX 145
A+ +++ GLR GN+ LP D N+VL AL EAGW VE DGTTYR
Sbjct: 63 AVAAKIYTGLRAQGNYNLPKHCDNNEVLKALCSEAGWVVEEDGTTYRKGHKPLPGDMAGS 122
Query: 146 XMXXXXXXXXXXFPVRSV-ESPLSVKNCSVKASVECQPSVLRIDESLSPASFDSVVIPER 204
P+ S +SP + + V S PS R+ + P + S + P
Sbjct: 123 SSRATPYSSHNQSPLSSTFDSP--ILSYQVSPSSSSFPSPSRVGD---PHNI-STIFPFL 176
Query: 205 DSRGGEFNASTSP--INNS 221
R G +S P I+NS
Sbjct: 177 --RNGGIPSSLPPLRISNS 193
>TAIR|locus:2101719 [details] [associations]
symbol:BEH1 "BES1/BZR1 homolog 1" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008150 "biological_process" evidence=ND] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0005773 "vacuole" evidence=IDA] GO:GO:0005773 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0006355 EMBL:AL132979 EMBL:AL049862
InterPro:IPR008540 Pfam:PF05687 EMBL:BT002452 EMBL:BT006310
IPI:IPI00516428 PIR:T46152 RefSeq:NP_190644.1 UniGene:At.35459
EnsemblPlants:AT3G50750.1 GeneID:824239 KEGG:ath:AT3G50750
TAIR:At3g50750 eggNOG:NOG316759 HOGENOM:HOG000238930
InParanoid:Q9S7F3 OMA:WIVHEDG PhylomeDB:Q9S7F3
ProtClustDB:CLSN2684558 Genevestigator:Q9S7F3 GermOnline:AT3G50750
Uniprot:Q9S7F3
Length = 276
Score = 137 (53.3 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 26/47 (55%), Positives = 31/47 (65%)
Query: 86 AITSRMLAGLRQYGNFPLPARADMNDVLAALAREAGWTVEPDGTTYR 132
AI +++ GLR GN+ LP D N+VL AL EAGW V DGTTYR
Sbjct: 33 AIAAKIFTGLRSQGNYKLPKHCDNNEVLKALCLEAGWIVHEDGTTYR 79
>TAIR|locus:2037279 [details] [associations]
symbol:BZR1 "BRASSINAZOLE-RESISTANT 1" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0009742 "brassinosteroid mediated signaling
pathway" evidence=IMP] [GO:0003677 "DNA binding" evidence=IDA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005829 "cytosol" evidence=IDA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IDA]
[GO:0048316 "seed development" evidence=IMP] [GO:0048481 "ovule
development" evidence=IMP] EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005829 GO:GO:0009742 GO:GO:0005634 GO:GO:0045892
GO:GO:0003677 GO:GO:0003700 GO:GO:0048316 GO:GO:0048481
EMBL:AC013258 InterPro:IPR008540 Pfam:PF05687 HOGENOM:HOG000238930
ProtClustDB:CLSN2684558 EMBL:AF494338 EMBL:AY065049 EMBL:AY093747
EMBL:AY087257 IPI:IPI00544916 PIR:G96780 RefSeq:NP_565099.1
RefSeq:NP_974145.1 UniGene:At.17945 UniGene:At.24668
UniGene:At.28634 DIP:DIP-47078N IntAct:Q8S307 STRING:Q8S307
PaxDb:Q8S307 PRIDE:Q8S307 EnsemblPlants:AT1G75080.1
EnsemblPlants:AT1G75080.2 GeneID:843845 KEGG:ath:AT1G75080
TAIR:At1g75080 eggNOG:NOG280347 InParanoid:Q8S307 KO:K14503
OMA:PNWESIA PhylomeDB:Q8S307 Genevestigator:Q8S307
GermOnline:AT1G75080 Uniprot:Q8S307
Length = 336
Score = 133 (51.9 bits), Expect = 5.1e-06, P = 5.1e-06
Identities = 25/47 (53%), Positives = 32/47 (68%)
Query: 86 AITSRMLAGLRQYGNFPLPARADMNDVLAALAREAGWTVEPDGTTYR 132
A+ +++ GLR G++ LP D N+VL AL EAGW VE DGTTYR
Sbjct: 42 AVAAKIYTGLRAQGDYNLPKHCDNNEVLKALCVEAGWVVEEDGTTYR 88
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.137 0.425 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 454 365 0.00084 117 3 11 22 0.39 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 14
No. of states in DFA: 619 (66 KB)
Total size of DFA: 265 KB (2141 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 26.84u 0.16s 27.00t Elapsed: 00:00:01
Total cpu time: 26.84u 0.16s 27.00t Elapsed: 00:00:01
Start: Tue May 21 02:08:51 2013 End: Tue May 21 02:08:52 2013