BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 012890
(454 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P42784|CTPA_SYNP2 Carboxyl-terminal-processing protease OS=Synechococcus sp. (strain
ATCC 27264 / PCC 7002 / PR-6) GN=ctpA PE=3 SV=2
Length = 414
Score = 268 bits (685), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 145/358 (40%), Positives = 227/358 (63%), Gaps = 13/358 (3%)
Query: 94 RQVVAKTNEGIVEEAWQIVNDSFLDTGRHRWTPQNWQRKREDILSSSIQTRSKAHGIIKR 153
R + + ++ +AW+ V+ +++D + QNW R+ L ++TR +A+ +
Sbjct: 26 RAIAFTDEQDLLLQAWRYVSQAYVD---ETFNHQNWWLIRQKFLKRPLKTRDEAYEAVGE 82
Query: 154 MLASLGDPYTRFLSPAEFSKM---ARYDMSGIGINLREVPDANGVVTLKVLGLILDGPAH 210
MLA L DPYTR L P ++ + ++SG+G+ + P+ + L+V+ + PA
Sbjct: 83 MLALLDDPYTRLLRPEQYRSLKVSTSGELSGVGLQINVNPEVD---VLEVILPLPGSPAE 139
Query: 211 SAGVRQGDEVLAVNGVDVRGKSAFEVSSLLQGPSETFVTIEVKHGNCGPIESIQVQRQLV 270
+AG+ D++LA++G+D R E ++ ++G + V++ VK + +++V R +
Sbjct: 140 AAGIEAKDQILAIDGIDTRNIGLEEAAARMRGKKGSTVSLTVKSPKTDTVRTVKVTRDTI 199
Query: 271 ARTPVFYRLEHLDNGTTSVGYMRLKEFNALARKDLVTAMKRLQDMGASYFILDLRDNLGG 330
A PV+ +L+ NG VGY+RL +F+A A+ +++ ++ +LQ GA ++LDLR+N GG
Sbjct: 200 ALNPVYDKLDE-KNGE-KVGYIRLNQFSANAKTEIIKSLNQLQKQGADRYVLDLRNNPGG 257
Query: 331 LVQAGIEIAKLFLNEGETITYTVGRDPQYQKTIVADNSPLVTAPVIVLVNNRTASASEIV 390
L+QAGIEIA+L+L++ ETI YTV R ++ + A PL AP++VLVN TASASEI+
Sbjct: 258 LLQAGIEIARLWLDQ-ETIVYTVNRQGIFE-SYSAVGQPLTDAPLVVLVNQATASASEIL 315
Query: 391 ASALHDNCRAVLVGEKTFGKGLIQSVYELHDGSGVVVTIGKYVTPNHMDINGNGIEPD 448
A AL DN RA+LVGEKTFGKGLIQS++EL DG+G+ VT+ KY TP H DIN GI PD
Sbjct: 316 AGALQDNGRAMLVGEKTFGKGLIQSLFELPDGAGMAVTVAKYETPLHHDINKLGIMPD 373
>sp|Q55669|CTPA_SYNY3 Carboxyl-terminal-processing protease OS=Synechocystis sp. (strain
PCC 6803 / Kazusa) GN=ctpA PE=3 SV=1
Length = 427
Score = 264 bits (675), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 144/359 (40%), Positives = 224/359 (62%), Gaps = 12/359 (3%)
Query: 93 PRQVVAKTNEGIVEEAWQIVNDSFLDTGRHRWTPQNWQRKREDILSSSIQTRSKAHGIIK 152
P + + ++ ++W++VN S+LD + QNW RE + ++ R + + I+
Sbjct: 27 PSALAFTEEQKLLLQSWRLVNQSYLD---ETFNHQNWWLLREKYVKRPLRNREETYTAIE 83
Query: 153 RMLASLGDPYTRFLSPAEFSKM---ARYDMSGIGINLREVPDANGVVTLKVLGLILDGPA 209
MLA+L +P+TR L P ++ + ++SG+G+ + P+ N L+++ + PA
Sbjct: 84 EMLATLDEPFTRLLRPEQYGNLQVTTTGELSGVGLQININPETN---QLEIMAPLAGSPA 140
Query: 210 HSAGVRQGDEVLAVNGVDVRGKSAFEVSSLLQGPSETFVTIEVKHGNCGPIESIQVQRQL 269
AG++ D++LA++GVD + S E ++ ++GP T V++E+ + + RQL
Sbjct: 141 EEAGLQPHDQILAIDGVDTQTLSLDEAAARMRGPKNTKVSLEILSAGTEVPQEFTLTRQL 200
Query: 270 VARTPVFYRLEHLDNGTTSVGYMRLKEFNALARKDLVTAMKRLQDMGASYFILDLRDNLG 329
++ +PV +L+ G SVGY+RL +F+A A K++ A+ +L++ GA +ILDLR+N G
Sbjct: 201 ISLSPVAAQLDDSRPGQ-SVGYIRLSQFSANAYKEVAHALHQLEEQGADGYILDLRNNPG 259
Query: 330 GLVQAGIEIAKLFLNEGETITYTVGRDPQYQKTIVADNSPLVTAPVIVLVNNRTASASEI 389
GL+QAGI+IA+L+L E TI YTV R Q++ A+ P++VLVN TASASEI
Sbjct: 260 GLLQAGIDIARLWLPES-TIVYTVNRQGT-QESFTANGEAATDRPLVVLVNQGTASASEI 317
Query: 390 VASALHDNCRAVLVGEKTFGKGLIQSVYELHDGSGVVVTIGKYVTPNHMDINGNGIEPD 448
+A AL DN RA LVGEKTFGKGLIQS++EL DG+G+ VT+ KY TP H DI+ GI PD
Sbjct: 318 LAGALQDNQRATLVGEKTFGKGLIQSLFELSDGAGIAVTVAKYETPQHHDIHKLGIMPD 376
>sp|O04073|CTPA_SCEOB C-terminal processing peptidase, chloroplastic OS=Scenedesmus
obliquus GN=ctpA PE=1 SV=1
Length = 464
Score = 204 bits (520), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 128/361 (35%), Positives = 198/361 (54%), Gaps = 21/361 (5%)
Query: 107 EAWQIVNDSFLDTGRHRWTPQNWQRKREDILSSS-IQTRSKAHGIIKRMLASLGDPYTRF 165
EAW+ V+ +++D + Q+W + RE L + R++ + I+++LA L DP+TRF
Sbjct: 87 EAWRAVDRAYVD---KSFNGQSWFKLRETYLKKEPMDRRAQTYDAIRKLLAVLDDPFTRF 143
Query: 166 LSPAEFSKMARYDMSGI-GINLREVPDANGVVTLKVLGLILDGPAHSAGVRQGDEVLAVN 224
L P+ + + R + G+ L D + VL GPA AG R GD ++ V+
Sbjct: 144 LEPSRLAALRRGTAGSVTGVGLEITYDGGSGKDVVVLTPAPGGPAEKAGARAGDVIVTVD 203
Query: 225 GVDVRGKSAFEVSSLLQGPSETFVTIEVKHGNCGP--IESIQVQRQLVARTPVFY----- 277
G V+G S ++VS LLQG +++ V + V H P ++Q+ RQ V PV +
Sbjct: 204 GTAVKGLSLYDVSDLLQGEADSQVEV-VLHAPGAPSNTRTLQLTRQKVTINPVTFTTCSN 262
Query: 278 ---RLEHLDNGTTSVGYMRLKEFNALARKDLVTAMKRLQDMGASYFILDLRDNLGGLVQA 334
+GY+RL FN+ A L G + +LD+R+N GGL A
Sbjct: 263 VAAAALPPGAAKQQLGYVRLATFNSNTTAAAQQAFTELSKQGVAGLVLDIRNNGGGLFPA 322
Query: 335 GIEIAKLFLNEGETITYTVGRDPQYQKTIV-ADNSPLVTA-PVIVLVNNRTASASEIVAS 392
G+ +A++ ++ G+ + D Q + I AD + + +A P++VLVN TASASE++A
Sbjct: 323 GVNVARMLVDRGDLVLIA---DSQGIRDIYSADGNSIDSATPLVVLVNRGTASASEVLAG 379
Query: 393 ALHDNCRAVLVGEKTFGKGLIQSVYELHDGSGVVVTIGKYVTPNHMDINGNGIEPDYRNL 452
AL D+ R ++ GE+TFGKGLIQ+V +L DGSGV VT+ +Y TP +DIN G+ PD +
Sbjct: 380 ALKDSKRGLIAGERTFGKGLIQTVVDLSDGSGVAVTVARYQTPAGVDINKIGVSPDVQLD 439
Query: 453 P 453
P
Sbjct: 440 P 440
>sp|O34666|CTPA_BACSU Carboxy-terminal processing protease CtpA OS=Bacillus subtilis
(strain 168) GN=ctpA PE=2 SV=1
Length = 466
Score = 148 bits (373), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 103/315 (32%), Positives = 174/315 (55%), Gaps = 22/315 (6%)
Query: 149 GIIKRMLASLGDPYTRFLSPAE---FSKMARYDMSGIGINLREVPDANGVVTLKVLGLIL 205
G IK M+ SL DPY+ ++ + F + GIG + E D ++ + G
Sbjct: 70 GAIKGMIQSLDDPYSTYMDQEQAKSFDETISASFEGIGAQVEE-KDGEILIVSPIKG--- 125
Query: 206 DGPAHSAGVRQGDEVLAVNGVDVRGKSAFEVSSLLQGPSETFVTIEVKHGNCGPIESIQV 265
PA AG++ D+++ VNG V+G + E +L++G T V +E+ G I+ + +
Sbjct: 126 -SPAEKAGIKPRDQIIKVNGKSVKGMNVNEAVALIRGKKGTKVKLELNRAGVGNID-LSI 183
Query: 266 QRQLVARTPVFYRLEHLDNGTTSVGYMRLKEFNALARKDLVTAMKRLQDMGASYFILDLR 325
+R + V+ ++ DN ++G +++ F+ K+L A+ L+ GA +ILDLR
Sbjct: 184 KRDTIPVETVYSEMK--DN---NIGEIQITSFSETTAKELTDAIDSLEKKGAKGYILDLR 238
Query: 326 DNLGGLVQAGIEIAKLFLNEGETITYTVGRDPQYQKTIVADNSPLVTAPVIVLVNNRTAS 385
N GGL++ I ++ LF+++G+ I ++ ++ + A+ VT P +VLVN+ TAS
Sbjct: 239 GNPGGLMEQAITMSNLFIDKGKNIMQVEYKNGS-KEVMKAEKERKVTKPTVVLVNDGTAS 297
Query: 386 ASEIVASALHDNCRAVLVGEKTFGKGLIQSVYELHDGSGVVVTIGKYVTPNHMDINGNGI 445
A+EI+A+ALH++ L+GE TFGKG +Q+ E DGS V +T+ K++T + I+ GI
Sbjct: 298 AAEIMAAALHESSNVPLIGETTFGKGTVQTAKEYDDGSTVKLTVAKWLTADGEWIHKKGI 357
Query: 446 E-------PDYRNLP 453
+ PDY LP
Sbjct: 358 KPQVKAELPDYAKLP 372
>sp|Q5HPB7|CTPAL_STAEQ Probable CtpA-like serine protease OS=Staphylococcus epidermidis
(strain ATCC 35984 / RP62A) GN=SERP0996 PE=3 SV=1
Length = 491
Score = 143 bits (360), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 95/302 (31%), Positives = 161/302 (53%), Gaps = 23/302 (7%)
Query: 154 MLASLGDPYTRFLSPAE---FSKMARYDMSGIGINLREVPDANGVVTLKVLGLILDGPAH 210
M+ L DPY+ +++ E F++ D GIG +++ + + V + D PA
Sbjct: 102 MVKELKDPYSEYMTAEETKQFNEGVSGDFVGIGAEMQKKNEQ-----ISVTSPMKDSPAE 156
Query: 211 SAGVRQGDEVLAVNGVDVRGKSAFEVSSLLQGPSETFVTIEVKHGNCGPIESIQVQRQLV 270
AG++ D V VN V GK +V +++G T+VT+ +K G+ + I+++R +
Sbjct: 157 KAGIQPKDIVTQVNHHSVVGKPLDQVVKMVRGKKGTYVTLTIKRGSQE--KDIKIKRDTI 214
Query: 271 ARTPVFYRLEHLDNGTTSVGYMRLKEFNALARKDLVTAMKRLQDMGASYFILDLRDNLGG 330
V Y + +VG + + +F + +L +A+ + G + ILDLR+N GG
Sbjct: 215 HVKSVEYEKK------GNVGVLTINKFQSNTSGELKSAIIKAHKQGIRHIILDLRNNPGG 268
Query: 331 LVQAGIEIAKLFLNEGETIT-YTVGRDPQYQKTIVADNSPLVTAP---VIVLVNNRTASA 386
L+ +++A +F+++G T+ G+D + KT N L A V +LVN +ASA
Sbjct: 269 LLDEAVKMANIFIDKGNTVVQLEKGKDKEELKT---SNQALKQAKDMKVSILVNEGSASA 325
Query: 387 SEIVASALHDNCRAVLVGEKTFGKGLIQSVYELHDGSGVVVTIGKYVTPNHMDINGNGIE 446
SE+ A+ D +A + G KTFGKG++Q++ E DGS + T K++TP+ I+G GI
Sbjct: 326 SEVFTGAMKDYHKAKVYGSKTFGKGIVQTIREFSDGSLIKYTEMKWLTPDGHYIHGKGIR 385
Query: 447 PD 448
PD
Sbjct: 386 PD 387
>sp|Q8CSK8|CTPAL_STAES Probable CtpA-like serine protease OS=Staphylococcus epidermidis
(strain ATCC 12228) GN=SE_1113 PE=3 SV=1
Length = 491
Score = 142 bits (358), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 95/302 (31%), Positives = 160/302 (52%), Gaps = 23/302 (7%)
Query: 154 MLASLGDPYTRFLSPAE---FSKMARYDMSGIGINLREVPDANGVVTLKVLGLILDGPAH 210
M+ L DPY+ +++ E F++ D GIG +++ + + V + D PA
Sbjct: 102 MVKELKDPYSEYMTAEETKQFNEGVSGDFVGIGAEMQKKNEQ-----ISVTSPMKDSPAE 156
Query: 211 SAGVRQGDEVLAVNGVDVRGKSAFEVSSLLQGPSETFVTIEVKHGNCGPIESIQVQRQLV 270
AG++ D V VN V GK +V +++G T+VT+ +K G+ + I+++R +
Sbjct: 157 KAGIQPKDIVTQVNHHSVVGKPLDQVVKMVRGKKGTYVTLTIKRGSQE--KDIKIKRDTI 214
Query: 271 ARTPVFYRLEHLDNGTTSVGYMRLKEFNALARKDLVTAMKRLQDMGASYFILDLRDNLGG 330
V Y + +VG + + +F + +L +A+ + G + ILDLR+N GG
Sbjct: 215 HVKSVEYEKK------GNVGVLTINKFQSNTSGELKSAIIKAHKQGIRHIILDLRNNPGG 268
Query: 331 LVQAGIEIAKLFLNEGETIT-YTVGRDPQYQKTIVADNSPLVTAP---VIVLVNNRTASA 386
L+ +++A +F+++G T+ G+D + KT N L A V +LVN +ASA
Sbjct: 269 LLDEAVKMANIFIDKGNTVVQLEKGKDKEELKT---SNQALKQAKDMKVSILVNEGSASA 325
Query: 387 SEIVASALHDNCRAVLVGEKTFGKGLIQSVYELHDGSGVVVTIGKYVTPNHMDINGNGIE 446
SE+ A+ D +A + G KTFGKG++Q+ E DGS + T K++TP+ I+G GI
Sbjct: 326 SEVFTGAMKDYHKAKVYGSKTFGKGIVQTTREFSDGSLIKYTEMKWLTPDGHYIHGKGIR 385
Query: 447 PD 448
PD
Sbjct: 386 PD 387
>sp|Q44879|CTPA_BARBK Carboxy-terminal-processing protease OS=Bartonella bacilliformis
(strain ATCC 35685 / KC583) GN=ctpA PE=3 SV=1
Length = 434
Score = 140 bits (353), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 104/307 (33%), Positives = 162/307 (52%), Gaps = 23/307 (7%)
Query: 151 IKRMLASLGDPYTRFLSPAEFSKM---ARYDMSGIGINLREVPDANGVVTLKVLGLILDG 207
I ML SL DP++ ++ + M + + G+GI EV N ++ KV+ I D
Sbjct: 65 INGMLLSL-DPHSSYMDAEKAKDMRDSTKGEFGGLGI---EVTMENNLI--KVVSPIDDT 118
Query: 208 PAHSAGVRQGDEVLAVNGVDVRGKSAFEVSSLLQGPSETFVTIEV-KHGNCGPIESIQVQ 266
PA AGV GD + ++G + G++ E ++GP+ T +T+ + + G P++ I++
Sbjct: 119 PAAKAGVLAGDFISKIDGKQISGQTLNEAVDQMRGPAGTPITLTINRFGVDKPLD-IKIV 177
Query: 267 RQLVARTPVFYRLEHLDNGTTSVGYMRLKEFNALARKDLVTAMKRLQDM----GASYFIL 322
R ++ V YR+E +GY+RL +F DL A+K +Q ++L
Sbjct: 178 RDIIKVKAVKYRVEG------DIGYLRLIQFTEKTFSDLQAAIKDIQSKIPTDKLKGYVL 231
Query: 323 DLRDNLGGLVQAGIEIAKLFLNEGETITYTVGRDPQYQKTIVADNSPLVT-APVIVLVNN 381
DLR N GGL+ I + FLN+GE ++ T GR A L P+IVL+N
Sbjct: 232 DLRLNPGGLLDQAISVTDAFLNKGEIVS-TRGRKQNDVMRFDAKLGDLTDEKPIIVLING 290
Query: 382 RTASASEIVASALHDNCRAVLVGEKTFGKGLIQSVYELHDGSGVVVTIGKYVTPNHMDIN 441
+ASASEIVA AL D+ RA ++G ++FGKG +Q++ L + + +T Y TP+ I
Sbjct: 291 GSASASEIVAGALQDHRRATIIGTQSFGKGSVQTIIPLGENGALRLTTALYYTPSGTSIQ 350
Query: 442 GNGIEPD 448
G GI PD
Sbjct: 351 GIGITPD 357
>sp|Q6GGY8|CTPAL_STAAR Probable CtpA-like serine protease OS=Staphylococcus aureus (strain
MRSA252) GN=SAR1432 PE=3 SV=1
Length = 496
Score = 138 bits (348), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 100/351 (28%), Positives = 176/351 (50%), Gaps = 44/351 (12%)
Query: 105 VEEAWQIVNDSFLDTGRHRWTPQNWQRKREDILSSSIQTRSKAHGIIKRMLASLGDPYTR 164
+E ++I+N + ++++ D LS + I M+ L DPY+
Sbjct: 79 IENVYKILNSDY------------YKKQNSDKLSKAA---------IDGMVKELKDPYSE 117
Query: 165 FLSPAE---FSKMARYDMSGIGINLREVPDANGVVTLKVLGLILDGPAHSAGVRQGDEVL 221
+L+ + F++ D GIG +++ D + V + PA AG+R D +
Sbjct: 118 YLTKEQTKSFNEGVSGDFVGIGAEMQKKNDQ-----IMVTSPMKGSPAERAGIRPKDVIT 172
Query: 222 AVNGVDVRGKSAFEVSSLLQGPSETFVTIEVKHGNCGPIESIQVQRQLVARTPVFYRLEH 281
VNG ++GK+ EV ++G T VT+ V+ G+ + ++++R+ + V Y+ +
Sbjct: 173 KVNGKSIKGKALDEVVKDVRGKENTEVTLTVQRGS--EEKDVKIKREKIHVKSVEYKKKG 230
Query: 282 LDNGTTSVGYMRLKEFNALARKDLVTAMKRLQDMGASYFILDLRDNLGGLVQAGIEIAKL 341
VG + + +F +L A+ + G +LDLR+N GGL+ +++A +
Sbjct: 231 ------KVGVITINKFQNDTSGELKDAVLKAHKDGLKKIVLDLRNNPGGLLDEAVKMANI 284
Query: 342 FLNEGETIT-YTVGRDPQYQKTIVADNSPLVTAP---VIVLVNNRTASASEIVASALHDN 397
F+++G+T+ G+D + I N L A + +LVN +ASASE+ AL D
Sbjct: 285 FIDKGKTVVKLEKGKDTE---AIQTSNDALKEAKDMDISILVNEGSASASEVFTGALKDY 341
Query: 398 CRAVLVGEKTFGKGLIQSVYELHDGSGVVVTIGKYVTPNHMDINGNGIEPD 448
+A + G KTFGKG++Q+ E DGS + T K++TP+ I+G GI+PD
Sbjct: 342 NKAKVYGSKTFGKGVVQTTREFKDGSLLKYTEMKWLTPDGHYIHGKGIKPD 392
>sp|Q2YXZ9|CTPAL_STAAB Probable CtpA-like serine protease OS=Staphylococcus aureus (strain
bovine RF122 / ET3-1) GN=SAB1275c PE=3 SV=1
Length = 496
Score = 137 bits (346), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 94/305 (30%), Positives = 160/305 (52%), Gaps = 23/305 (7%)
Query: 151 IKRMLASLGDPYTRFLSPAE---FSKMARYDMSGIGINLREVPDANGVVTLKVLGLILDG 207
I M+ L DPY+ +L+ + F++ D GIG +++ D + V +
Sbjct: 104 IDGMVKELKDPYSEYLTKEQTKSFNEGVSGDFVGIGAEMQKKNDQ-----IMVTSPMKGS 158
Query: 208 PAHSAGVRQGDEVLAVNGVDVRGKSAFEVSSLLQGPSETFVTIEVKHGNCGPIESIQVQR 267
PA AG+R D + VNG ++GK+ EV ++G T VT+ V+ G+ + ++++R
Sbjct: 159 PAERAGIRPKDVITKVNGKSIKGKALDEVVKDVRGKENTEVTLTVQRGS--EEKDVKIKR 216
Query: 268 QLVARTPVFYRLEHLDNGTTSVGYMRLKEFNALARKDLVTAMKRLQDMGASYFILDLRDN 327
+ + V Y+ + VG + + +F +L A+ + G +LDLR+N
Sbjct: 217 EKIHVKSVEYKKKG------KVGVITINKFQNDTSGELKDAVLKAHKDGLKKIVLDLRNN 270
Query: 328 LGGLVQAGIEIAKLFLNEGETIT-YTVGRDPQYQKTIVADNSPLVTAP---VIVLVNNRT 383
GGL+ +++A +F+++G+T+ G+D + I N L A + +LVN +
Sbjct: 271 PGGLLDEAVKMANIFIDKGKTVVKLEKGKDTE---AIQTSNDALKEAKDMDISILVNEGS 327
Query: 384 ASASEIVASALHDNCRAVLVGEKTFGKGLIQSVYELHDGSGVVVTIGKYVTPNHMDINGN 443
ASASE+ AL D +A + G KTFGKG++Q+ E DGS + T K++TP+ I+G
Sbjct: 328 ASASEVFTGALKDYNKAKVYGSKTFGKGVVQTTREFKDGSLLKYTEMKWLTPDGHYIHGK 387
Query: 444 GIEPD 448
GI+PD
Sbjct: 388 GIKPD 392
>sp|Q5HG01|CTPAL_STAAC Probable CtpA-like serine protease OS=Staphylococcus aureus (strain
COL) GN=SACOL1455 PE=3 SV=1
Length = 496
Score = 137 bits (346), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 94/305 (30%), Positives = 160/305 (52%), Gaps = 23/305 (7%)
Query: 151 IKRMLASLGDPYTRFLSPAE---FSKMARYDMSGIGINLREVPDANGVVTLKVLGLILDG 207
I M+ L DPY+ +L+ + F++ D GIG +++ D + V +
Sbjct: 104 IDGMVKELKDPYSEYLTKEQTKSFNEGVSGDFVGIGAEMQKKNDQ-----IMVTSPMKGS 158
Query: 208 PAHSAGVRQGDEVLAVNGVDVRGKSAFEVSSLLQGPSETFVTIEVKHGNCGPIESIQVQR 267
PA AG+R D + VNG ++GK+ EV ++G T VT+ V+ G+ + ++++R
Sbjct: 159 PAERAGIRPKDVITKVNGKSIKGKALDEVVKDVRGKENTEVTLTVQRGS--EEKDVKIKR 216
Query: 268 QLVARTPVFYRLEHLDNGTTSVGYMRLKEFNALARKDLVTAMKRLQDMGASYFILDLRDN 327
+ + V Y+ + VG + + +F +L A+ + G +LDLR+N
Sbjct: 217 EKIHVKSVEYKKKG------KVGVITINKFQNDTSGELKDAVLKAHKDGLKKIVLDLRNN 270
Query: 328 LGGLVQAGIEIAKLFLNEGETIT-YTVGRDPQYQKTIVADNSPLVTAP---VIVLVNNRT 383
GGL+ +++A +F+++G+T+ G+D + I N L A + +LVN +
Sbjct: 271 PGGLLDEAVKMANIFIDKGKTVVKLEKGKDTE---AIQTSNDALKEAKDMDISILVNEGS 327
Query: 384 ASASEIVASALHDNCRAVLVGEKTFGKGLIQSVYELHDGSGVVVTIGKYVTPNHMDINGN 443
ASASE+ AL D +A + G KTFGKG++Q+ E DGS + T K++TP+ I+G
Sbjct: 328 ASASEVFTGALKDYNKAKVYGSKTFGKGVVQTTREFKDGSLLKYTEMKWLTPDGHYIHGK 387
Query: 444 GIEPD 448
GI+PD
Sbjct: 388 GIKPD 392
>sp|Q8NWR2|CTPAL_STAAW Probable CtpA-like serine protease OS=Staphylococcus aureus (strain
MW2) GN=MW1310 PE=3 SV=1
Length = 496
Score = 137 bits (345), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 94/305 (30%), Positives = 160/305 (52%), Gaps = 23/305 (7%)
Query: 151 IKRMLASLGDPYTRFLSPAE---FSKMARYDMSGIGINLREVPDANGVVTLKVLGLILDG 207
I M+ L DPY+ +L+ + F++ D GIG +++ D + V +
Sbjct: 104 IDGMVKELKDPYSEYLTKEQTKSFNEGVSGDFVGIGAEMQKKNDQ-----IMVTSPMKGS 158
Query: 208 PAHSAGVRQGDEVLAVNGVDVRGKSAFEVSSLLQGPSETFVTIEVKHGNCGPIESIQVQR 267
PA AG+R D + VNG ++GK+ EV ++G T VT+ V+ G+ + ++++R
Sbjct: 159 PAERAGIRPKDVITKVNGKSIKGKALDEVVKDVRGKENTEVTLTVQRGS--EEKDVKIKR 216
Query: 268 QLVARTPVFYRLEHLDNGTTSVGYMRLKEFNALARKDLVTAMKRLQDMGASYFILDLRDN 327
+ + V Y+ + VG + + +F +L A+ + G +LDLR+N
Sbjct: 217 EKIHVKSVEYKKKG------KVGVITINKFQNDTSGELKDAVLKAHKDGLKKIVLDLRNN 270
Query: 328 LGGLVQAGIEIAKLFLNEGETIT-YTVGRDPQYQKTIVADNSPLVTAP---VIVLVNNRT 383
GGL+ +++A +F+++G+T+ G+D + I N L A + +LVN +
Sbjct: 271 PGGLLDEAVKMANIFIDKGKTVVKLEKGKDTE---AIQTSNDALKEAKDMDISILVNEGS 327
Query: 384 ASASEIVASALHDNCRAVLVGEKTFGKGLIQSVYELHDGSGVVVTIGKYVTPNHMDINGN 443
ASASE+ AL D +A + G KTFGKG++Q+ E DGS + T K++TP+ I+G
Sbjct: 328 ASASEVFTGALKDYNKAKVYGSKTFGKGVVQTTREFKDGSLLKYTEMKWLTPDGHYIHGK 387
Query: 444 GIEPD 448
GI+PD
Sbjct: 388 GIKPD 392
>sp|Q6G9E1|CTPAL_STAAS Probable CtpA-like serine protease OS=Staphylococcus aureus (strain
MSSA476) GN=SAS1363 PE=3 SV=1
Length = 496
Score = 137 bits (345), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 94/305 (30%), Positives = 160/305 (52%), Gaps = 23/305 (7%)
Query: 151 IKRMLASLGDPYTRFLSPAE---FSKMARYDMSGIGINLREVPDANGVVTLKVLGLILDG 207
I M+ L DPY+ +L+ + F++ D GIG +++ D + V +
Sbjct: 104 IDGMVKELKDPYSEYLTKEQTKSFNEGVSGDFVGIGAEMQKKNDQ-----IMVTSPMKGS 158
Query: 208 PAHSAGVRQGDEVLAVNGVDVRGKSAFEVSSLLQGPSETFVTIEVKHGNCGPIESIQVQR 267
PA AG+R D + VNG ++GK+ EV ++G T VT+ V+ G+ + ++++R
Sbjct: 159 PAERAGIRPKDVITKVNGKSIKGKALDEVVKDVRGKENTEVTLTVQRGS--EEKDVKIKR 216
Query: 268 QLVARTPVFYRLEHLDNGTTSVGYMRLKEFNALARKDLVTAMKRLQDMGASYFILDLRDN 327
+ + V Y+ + VG + + +F +L A+ + G +LDLR+N
Sbjct: 217 EKIHVKSVEYKKKG------KVGVITINKFQNDTSGELKDAVLKAHKDGLKKIVLDLRNN 270
Query: 328 LGGLVQAGIEIAKLFLNEGETIT-YTVGRDPQYQKTIVADNSPLVTAP---VIVLVNNRT 383
GGL+ +++A +F+++G+T+ G+D + I N L A + +LVN +
Sbjct: 271 PGGLLDEAVKMANIFIDKGKTVVKLEKGKDTE---AIQTSNDALKEAKDMDISILVNEGS 327
Query: 384 ASASEIVASALHDNCRAVLVGEKTFGKGLIQSVYELHDGSGVVVTIGKYVTPNHMDINGN 443
ASASE+ AL D +A + G KTFGKG++Q+ E DGS + T K++TP+ I+G
Sbjct: 328 ASASEVFTGALKDYNKAKVYGSKTFGKGVVQTTREFKDGSLLKYTEMKWLTPDGHYIHGK 387
Query: 444 GIEPD 448
GI+PD
Sbjct: 388 GIKPD 392
>sp|Q7A5M9|CTPAL_STAAN Probable CtpA-like serine protease OS=Staphylococcus aureus (strain
N315) GN=SA1253 PE=1 SV=1
Length = 496
Score = 137 bits (345), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 94/305 (30%), Positives = 160/305 (52%), Gaps = 23/305 (7%)
Query: 151 IKRMLASLGDPYTRFLSPAE---FSKMARYDMSGIGINLREVPDANGVVTLKVLGLILDG 207
I M+ L DPY+ +L+ + F++ D GIG +++ D + V +
Sbjct: 104 IDGMVKELKDPYSEYLTKEQTKSFNEGVSGDFVGIGAEMQKKNDQ-----IMVTSPMKGS 158
Query: 208 PAHSAGVRQGDEVLAVNGVDVRGKSAFEVSSLLQGPSETFVTIEVKHGNCGPIESIQVQR 267
PA AG+R D + VNG ++GK+ EV ++G T VT+ V+ G+ + ++++R
Sbjct: 159 PAERAGIRPKDVITKVNGKSIKGKALDEVVKDVRGKENTEVTLTVQRGS--EEKDVKIKR 216
Query: 268 QLVARTPVFYRLEHLDNGTTSVGYMRLKEFNALARKDLVTAMKRLQDMGASYFILDLRDN 327
+ + V Y+ + VG + + +F +L A+ + G +LDLR+N
Sbjct: 217 EKIHVKSVDYKKKG------KVGVITINKFQNDTSGELKDAVLKAHKDGLKKIVLDLRNN 270
Query: 328 LGGLVQAGIEIAKLFLNEGETIT-YTVGRDPQYQKTIVADNSPLVTAP---VIVLVNNRT 383
GGL+ +++A +F+++G+T+ G+D + I N L A + +LVN +
Sbjct: 271 PGGLLDEAVKMANIFIDKGKTVVKLEKGKDTE---AIQTSNDSLKEAKDMDISILVNEGS 327
Query: 384 ASASEIVASALHDNCRAVLVGEKTFGKGLIQSVYELHDGSGVVVTIGKYVTPNHMDINGN 443
ASASE+ AL D +A + G KTFGKG++Q+ E DGS + T K++TP+ I+G
Sbjct: 328 ASASEVFTGALKDYNKAKVYGSKTFGKGVVQTTREFKDGSLLKYTEMKWLTPDGHYIHGK 387
Query: 444 GIEPD 448
GI+PD
Sbjct: 388 GIKPD 392
>sp|Q99U67|CTPAL_STAAM Probable CtpA-like serine protease OS=Staphylococcus aureus (strain
Mu50 / ATCC 700699) GN=SAV1420 PE=3 SV=1
Length = 496
Score = 137 bits (345), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 94/305 (30%), Positives = 160/305 (52%), Gaps = 23/305 (7%)
Query: 151 IKRMLASLGDPYTRFLSPAE---FSKMARYDMSGIGINLREVPDANGVVTLKVLGLILDG 207
I M+ L DPY+ +L+ + F++ D GIG +++ D + V +
Sbjct: 104 IDGMVKELKDPYSEYLTKEQTKSFNEGVSGDFVGIGAEMQKKNDQ-----IMVTSPMKGS 158
Query: 208 PAHSAGVRQGDEVLAVNGVDVRGKSAFEVSSLLQGPSETFVTIEVKHGNCGPIESIQVQR 267
PA AG+R D + VNG ++GK+ EV ++G T VT+ V+ G+ + ++++R
Sbjct: 159 PAERAGIRPKDVITKVNGKSIKGKALDEVVKDVRGKENTEVTLTVQRGS--EEKDVKIKR 216
Query: 268 QLVARTPVFYRLEHLDNGTTSVGYMRLKEFNALARKDLVTAMKRLQDMGASYFILDLRDN 327
+ + V Y+ + VG + + +F +L A+ + G +LDLR+N
Sbjct: 217 EKIHVKSVDYKKKG------KVGVITINKFQNDTSGELKDAVLKAHKDGLKKIVLDLRNN 270
Query: 328 LGGLVQAGIEIAKLFLNEGETIT-YTVGRDPQYQKTIVADNSPLVTAP---VIVLVNNRT 383
GGL+ +++A +F+++G+T+ G+D + I N L A + +LVN +
Sbjct: 271 PGGLLDEAVKMANIFIDKGKTVVKLEKGKDTE---AIQTSNDSLKEAKDMDISILVNEGS 327
Query: 384 ASASEIVASALHDNCRAVLVGEKTFGKGLIQSVYELHDGSGVVVTIGKYVTPNHMDINGN 443
ASASE+ AL D +A + G KTFGKG++Q+ E DGS + T K++TP+ I+G
Sbjct: 328 ASASEVFTGALKDYNKAKVYGSKTFGKGVVQTTREFKDGSLLKYTEMKWLTPDGHYIHGK 387
Query: 444 GIEPD 448
GI+PD
Sbjct: 388 GIKPD 392
>sp|Q4L6D0|CTPAL_STAHJ Probable CtpA-like serine protease OS=Staphylococcus haemolyticus
(strain JCSC1435) GN=SH1486 PE=3 SV=2
Length = 496
Score = 135 bits (340), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 92/301 (30%), Positives = 161/301 (53%), Gaps = 17/301 (5%)
Query: 154 MLASLGDPYTRFLSPAE---FSKMARYDMSGIGINLREVPDANGVVTLKVLGLILDGPAH 210
M+ L DPY+ +++ E F++ D GIG +++ D ++T + D PA
Sbjct: 107 MVKELKDPYSEYMTKDETKSFNEDVSGDFVGIGAEMQK-KDKQIMIT----SPMKDSPAE 161
Query: 211 SAGVRQGDEVLAVNGVDVRGKSAFEVSSLLQGPSETFVTIEVKHGNCGPIESIQVQRQLV 270
AG++ D V V+G V GK +V L++G T V + +K G+ + I+++R +
Sbjct: 162 KAGIQPKDVVTKVDGKSVVGKPLDQVVKLVRGKEGTTVKLTIKRGSQE--KEIKIKRGKI 219
Query: 271 ARTPVFYRLEHLDNGTTSVGYMRLKEFNALARKDLVTAMKRLQDMGASYFILDLRDNLGG 330
V Y+ + DN +G + +F +L +A+ + G +LDLR+N GG
Sbjct: 220 HVKSVEYKKK--DN----IGVFTINKFQDNTAGELKSAIIKAHKDGVRSIVLDLRNNPGG 273
Query: 331 LVQAGIEIAKLFLNEGETIT-YTVGRDPQYQKTIVADNSPLVTAPVIVLVNNRTASASEI 389
L+ +++A +F+++ +T+ G D + KT ++ V +LVN +ASASE+
Sbjct: 274 LLDEAVKMANIFIDKDQTVVKLEKGDDTESIKTSNDASNEAKDMKVSILVNEGSASASEV 333
Query: 390 VASALHDNCRAVLVGEKTFGKGLIQSVYELHDGSGVVVTIGKYVTPNHMDINGNGIEPDY 449
A+ D+ +A + G KTFGKG++Q+ E DGS + T K++TP+ +I+G GI+PD
Sbjct: 334 FTGAMRDHKKAKVYGSKTFGKGIVQTTREFKDGSLLKYTQMKWLTPDGHNIHGKGIQPDT 393
Query: 450 R 450
+
Sbjct: 394 K 394
>sp|Q49XN1|CTPAL_STAS1 Probable CtpA-like serine protease OS=Staphylococcus saprophyticus
subsp. saprophyticus (strain ATCC 15305 / DSM 20229)
GN=SSP1319 PE=3 SV=1
Length = 491
Score = 131 bits (330), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 90/306 (29%), Positives = 156/306 (50%), Gaps = 21/306 (6%)
Query: 151 IKRMLASLGDPYTRFLSPAE---FSKMARYDMSGIGINLREVPDANGVVTLKVLGLILDG 207
I M+ L DPY+ +++ E F++ D GIG +++ + +++ +
Sbjct: 99 IDGMVKKLDDPYSDYMTKKETKSFNEDVSGDFVGIGAEMQKKGNQ-----IQITSPMKQS 153
Query: 208 PAHSAGVRQGDEVLAVNGVDVRGKSAFEVSSLLQGPSETFVTIEVKHGNCGPIESIQVQR 267
PA AG++ D V VNG ++G+ + ++G T VT+ ++ G G I ++R
Sbjct: 154 PAEKAGIQPKDVVTKVNGKSIKGQPLEAIVKKVRGKQGTKVTLTIERG--GQAHDITIKR 211
Query: 268 QLVARTPVFYRLEHLDNGTTSVGYMRLKEFNALARKDLVTAMKRLQDMGASYFILDLRDN 327
+ V Y+ +H D VG + +F +L +A+ + G +LDLR+N
Sbjct: 212 DKIHVKSVEYQ-KHGD-----VGVFTINKFQNSTSGELKSAIIKAHKDGIRKIVLDLRNN 265
Query: 328 LGGLVQAGIEIAKLFLNEGETITYTVGRDPQYQKTIVADNSPLVTAP---VIVLVNNRTA 384
GGL+ +++A +F+++ ET+ ++++ I A N A V +LVN +A
Sbjct: 266 PGGLLDEAVKMANIFIDKNETVVQL--EKGKHKEAIKASNDASKEAKDMDVSILVNKGSA 323
Query: 385 SASEIVASALHDNCRAVLVGEKTFGKGLIQSVYELHDGSGVVVTIGKYVTPNHMDINGNG 444
SASE+ A+ D +A + G KTFGKG++Q+ E DGS + T K++TP I+G G
Sbjct: 324 SASEVFTGAMKDYNKAKVYGSKTFGKGIVQTTREFEDGSLLKFTNMKWLTPKSHYIHGKG 383
Query: 445 IEPDYR 450
I PD +
Sbjct: 384 ITPDKK 389
>sp|O35002|CTPB_BACSU Carboxy-terminal processing protease CtpB OS=Bacillus subtilis
(strain 168) GN=ctpB PE=1 SV=1
Length = 480
Score = 118 bits (295), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 91/349 (26%), Positives = 171/349 (48%), Gaps = 38/349 (10%)
Query: 105 VEEAWQIVNDSFLDTGRHRWTPQNWQRKREDILSSSIQTRSKAHGIIKRMLASLGDPYTR 164
+E+A++++++ +++ + RE +L +IQ ML++L DPY+
Sbjct: 55 IEKAYELISNEYVE-----------KVDREKLLEGAIQG----------MLSTLNDPYSV 93
Query: 165 FL---SPAEFSKMARYDMSGIGINLREVPDANGVVTLKVLGLILDGPAHSAGVRQGDEVL 221
++ + +FS GIG EV +G + ++ PA AG++ DE++
Sbjct: 94 YMDKQTAKQFSDSLDSSFEGIGA---EVGMEDGKII--IVSPFKKSPAEKAGLKPNDEII 148
Query: 222 AVNGVDVRGKSAFEVSSLLQGPSETFVTIEVKHGNCGPIESIQVQRQLVARTPVFYRLEH 281
++NG + GK ++G + V+++++ S +++R + VF +
Sbjct: 149 SINGESMAGKDLNHAVLKIRGKKGSSVSMKIQRPGTKKQLSFRIKRAEIPLETVFASEKK 208
Query: 282 LDNGTTSVGYMRLKEFNALARKDLVTAMKRLQDMGASYFILDLRDNLGGLVQAGIEIAKL 341
+ SVGY+ + F+ +D A++ L+ ++D+R N GG +Q+ EI K
Sbjct: 209 VQG--HSVGYIAISTFSEHTAEDFAKALRELEKKEIEGLVIDVRGNPGGYLQSVEEILKH 266
Query: 342 FLNEGE---TITYTVGRDPQYQKTIVADNSPLVTAPVIVLVNNRTASASEIVASALHDNC 398
F+ + + I G +Y T+ + PV V+ + +ASASEI+A AL +
Sbjct: 267 FVTKDQPYIQIAERNGDKKRYFSTLTHKKA----YPVNVITDKGSASASEILAGALKEAG 322
Query: 399 RAVLVGEKTFGKGLIQSVYELHDGSGVVVTIGKYVTPNHMDINGNGIEP 447
+VG+ +FGKG +Q + DGS + +T+ K++TPN I+ GIEP
Sbjct: 323 HYDVVGDTSFGKGTVQQAVPMGDGSNIKLTLYKWLTPNGNWIHKKGIEP 371
>sp|P23865|PRC_ECOLI Tail-specific protease OS=Escherichia coli (strain K12) GN=prc PE=1
SV=2
Length = 682
Score = 96.3 bits (238), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 87/311 (27%), Positives = 144/311 (46%), Gaps = 28/311 (9%)
Query: 160 DPYTRFLSP---AEFSKMARYDMSGIGINLREVPDANGVVTLKVLGLILDGPA-HSAGVR 215
DP+T +LSP +F+ + GIG L ++ D V+ V G GPA S +
Sbjct: 223 DPHTNYLSPRNTEQFNTEMSLSLEGIGAVL-QMDDDYTVINSMVAG----GPAAKSKAIS 277
Query: 216 QGDEVLAVNG-----VDVRGKSAFEVSSLLQGPSETFVTIEV-KHGNCGPIESIQVQRQL 269
GD+++ V VDV G +V +L++GP + V +E+ G ++ + R+
Sbjct: 278 VGDKIVGVGQTGKPMVDVIGWRLDDVVALIKGPKGSKVRLEILPAGKGTKTRTVTLTRER 337
Query: 270 VARTPVFYRLEHLDNGTTSVGYMRLKEFNALARKDLVTAMKRLQDMGASYFILDLRDNLG 329
+ ++ G VG + + F D+ +++L+ S I+DLR N G
Sbjct: 338 IRLEDRAVKMSVKTVGKEKVGVLDIPGFYVGLTDDVKVQLQKLEKQNVSSVIIDLRSNGG 397
Query: 330 GLVQAGIEIAKLFLNEGETITYTVGRDPQYQKTIVADNSPLVTAPVIVLVNNRTASASEI 389
G + + ++ LF+ G I + + ++ D P++VLV+ +ASASEI
Sbjct: 398 GALTEAVSLSGLFIPAG-PIVQVRDNNGKVREDSDTDGQVFYKGPLVVLVDRFSASASEI 456
Query: 390 VASALHDNCRAVLVGEKTFGKGLIQ---SVYELHDG---------SGVVVTIGKYVTPNH 437
A+A+ D RA++VGE TFGKG +Q S+ ++D V TI K+ N
Sbjct: 457 FAAAMQDYGRALVVGEPTFGKGTVQQYRSLNRIYDQMLRPEWPALGSVQYTIQKFYRVNG 516
Query: 438 MDINGNGIEPD 448
G+ PD
Sbjct: 517 GSTQRKGVTPD 527
>sp|P43669|PRC_SALTY Tail-specific protease OS=Salmonella typhimurium (strain LT2 /
SGSC1412 / ATCC 700720) GN=prc PE=3 SV=2
Length = 682
Score = 91.7 bits (226), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 85/311 (27%), Positives = 142/311 (45%), Gaps = 28/311 (9%)
Query: 160 DPYTRFLSP---AEFSKMARYDMSGIGINLREVPDANGVVTLKVLGLILDGPA-HSAGVR 215
DP+T +LSP +F+ + GIG L ++ D V+ L+ GPA S +
Sbjct: 223 DPHTNYLSPRNTEQFNTEMSLSLEGIGAVL-QMDDDYTVIN----SLVAGGPAAKSKSIS 277
Query: 216 QGDEVLAVNG-----VDVRGKSAFEVSSLLQGPSETFVTIEV-KHGNCGPIESIQVQRQL 269
GD ++ V VDV G +V +L++GP + V +E+ G I + R+
Sbjct: 278 VGDRIVGVGQAGKPMVDVIGWRLDDVVALIKGPKGSKVRLEILPAGKGTKTRIITLTRER 337
Query: 270 VARTPVFYRLEHLDNGTTSVGYMRLKEFNALARKDLVTAMKRLQDMGASYFILDLRDNLG 329
+ ++ G VG + + F D+ +++L+ + ++DLR N G
Sbjct: 338 IRLEDRAVKMSVKTVGKEKVGVLDIPGFYVGLTDDVKVQLQKLEKQNVNSIVIDLRSNGG 397
Query: 330 GLVQAGIEIAKLFLNEGETITYTVGRDPQYQKTIVADNSPLVTAPVIVLVNNRTASASEI 389
G + + ++ LF+ G I + + ++ D P++VLV+ +ASASEI
Sbjct: 398 GALTEAVSLSGLFIPSG-PIVQVRDNNGKVREDSDTDGVVYYKGPLVVLVDRFSASASEI 456
Query: 390 VASALHDNCRAVLVGEKTFGKGLIQ---SVYELHDG---------SGVVVTIGKYVTPNH 437
A+A+ D RA++VGE TFGKG +Q S+ ++D V TI K+ N
Sbjct: 457 FAAAMQDYGRALIVGEPTFGKGTVQQYRSLNRIYDQMLRPEWPALGSVQYTIQKFYRVNG 516
Query: 438 MDINGNGIEPD 448
G+ PD
Sbjct: 517 GSTQRKGVTPD 527
>sp|P45306|PRC_HAEIN Tail-specific protease OS=Haemophilus influenzae (strain ATCC 51907
/ DSM 11121 / KW20 / Rd) GN=prc PE=3 SV=1
Length = 695
Score = 90.9 bits (224), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 98/395 (24%), Positives = 174/395 (44%), Gaps = 36/395 (9%)
Query: 85 GEDAAESEPRQVVAKTNEGIVEEAW--QIVNDSF-LDTGRHRWTPQNWQRKREDILSSSI 141
G+D E + + A E + W ++ ND L +W+ + + L+
Sbjct: 150 GQDQIEIDREKAAAPQTEADANKLWDARVKNDIINLKLKDKKWSEIKAKLTKRYNLAIRR 209
Query: 142 QTRSKAHGIIKRMLASLG---DPYTRFLSP---AEFSKMARYDMSGIGINLREVPDANGV 195
T++KA I++ L + DP+T +LSP F++ + GIG L+ D
Sbjct: 210 LTQTKADDIVQIYLNAFAREIDPHTSYLSPRTAKSFNESINLSLEGIGTTLQSEDD---- 265
Query: 196 VTLKVLGLILDGPAH-SAGVRQGDEVLAVNGV-----DVRGKSAFEVSSLLQGPSETFVT 249
+ + L+ PA S + GD+++ V DV G ++ ++G T V
Sbjct: 266 -EISIKSLVPGAPAERSKKLHPGDKIIGVGQATGDIEDVVGWRLEDLVEKIKGKKGTKVR 324
Query: 250 IEVKHGNCGPIESIQVQRQLVARTPVFYRLEHLDNGTTSVGYMRLKEFNALARKDLVTAM 309
+E++ G I + R V +L ++ +++ F +D+ +
Sbjct: 325 LEIEPAKGGKSRIITLVRDKVRIEDQAAKLTFEKVSGKNIAVIKIPSFYIGLTEDVKKLL 384
Query: 310 KRLQDMGASYFILDLRDNLGGLVQAGIEIAKLFLNEGETITYTVGRDPQYQKTIV---AD 366
+L++ A I+DLR+N GG + + ++ LF+ +G + RD YQ+ V D
Sbjct: 385 VKLENQKAEALIVDLRENGGGALTEAVALSGLFITDGPVVQV---RDA-YQRIRVHEDDD 440
Query: 367 NSPLVTAPVIVLVNNRTASASEIVASALHDNCRAVLVGEKTFGKGLIQS------VYELH 420
+ + V++N +ASASEI A+A+ D R +++G+ TFGKG +Q +Y+L
Sbjct: 441 ATQQYKGLLFVMINRYSASASEIFAAAMQDYRRGIIIGQNTFGKGTVQQSRSLNFIYDLD 500
Query: 421 DGS-GVV-VTIGKYVTPNHMDINGNGIEPDYRNLP 453
GV+ TI K+ N G+ D N P
Sbjct: 501 QSPLGVLQYTIQKFYRVNGGSTQLKGVAADI-NFP 534
>sp|Q5PYH7|DLG2_DANRE Disks large homolog 2 OS=Danio rerio GN=dlg2 PE=2 SV=1
Length = 881
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 43/72 (59%), Gaps = 4/72 (5%)
Query: 180 SGIGINLREVPDANGVVTLKVLGLILDGPAHSAG-VRQGDEVLAVNGVDVRGKSAFEVSS 238
+G+G N+ D G+ +L GPA +G +R+GD++L+VNG+D+RG + + ++
Sbjct: 432 TGLGFNIVGGEDGEGIFVSFILA---GGPADLSGELRRGDQILSVNGIDLRGATHEQAAA 488
Query: 239 LLQGPSETFVTI 250
L+G +T I
Sbjct: 489 ALKGAGQTVTII 500
>sp|Q15700|DLG2_HUMAN Disks large homolog 2 OS=Homo sapiens GN=DLG2 PE=1 SV=3
Length = 870
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 43/72 (59%), Gaps = 4/72 (5%)
Query: 180 SGIGINLREVPDANGVVTLKVLGLILDGPAHSAG-VRQGDEVLAVNGVDVRGKSAFEVSS 238
+G+G N+ D G+ +L GPA +G +++GD++L+VNG+D+RG S + ++
Sbjct: 429 TGLGFNIVGGEDGEGIFVSFILA---GGPADLSGELQRGDQILSVNGIDLRGASHEQAAA 485
Query: 239 LLQGPSETFVTI 250
L+G +T I
Sbjct: 486 ALKGAGQTVTII 497
>sp|Q91XM9|DLG2_MOUSE Disks large homolog 2 OS=Mus musculus GN=Dlg2 PE=1 SV=2
Length = 852
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 43/72 (59%), Gaps = 4/72 (5%)
Query: 180 SGIGINLREVPDANGVVTLKVLGLILDGPAHSAG-VRQGDEVLAVNGVDVRGKSAFEVSS 238
+G+G N+ D G+ +L GPA +G +++GD++L+VNG+D+RG S + ++
Sbjct: 429 TGLGFNIVGGEDGEGIFVSFILA---GGPADLSGELQRGDQILSVNGIDLRGASHEQAAA 485
Query: 239 LLQGPSETFVTI 250
L+G +T I
Sbjct: 486 ALKGAGQTVTII 497
>sp|Q63622|DLG2_RAT Disks large homolog 2 OS=Rattus norvegicus GN=Dlg2 PE=1 SV=1
Length = 852
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 43/72 (59%), Gaps = 4/72 (5%)
Query: 180 SGIGINLREVPDANGVVTLKVLGLILDGPAHSAG-VRQGDEVLAVNGVDVRGKSAFEVSS 238
+G+G N+ D G+ +L GPA +G +++GD++L+VNG+D+RG S + ++
Sbjct: 429 TGLGFNIVGGEDGEGIFVSFILA---GGPADLSGELQRGDQILSVNGIDLRGASHEQAAA 485
Query: 239 LLQGPSETFVTI 250
L+G +T I
Sbjct: 486 ALKGAGQTVTII 497
>sp|Q9P227|RHG23_HUMAN Rho GTPase-activating protein 23 OS=Homo sapiens GN=ARHGAP23 PE=1
SV=2
Length = 1491
Score = 43.1 bits (100), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 32/51 (62%)
Query: 197 TLKVLGLILDGPAHSAGVRQGDEVLAVNGVDVRGKSAFEVSSLLQGPSETF 247
T+ V + DGPAH AG+R GD ++ VNG V GK+ +V +L+Q +T
Sbjct: 97 TIFVKNVKEDGPAHRAGLRTGDRLVKVNGESVIGKTYSQVIALIQNSDDTL 147
>sp|P12661|RET3_BOVIN Retinol-binding protein 3 OS=Bos taurus GN=RBP3 PE=1 SV=1
Length = 1286
Score = 42.7 bits (99), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 68/144 (47%), Gaps = 27/144 (18%)
Query: 288 SVGYMRL-----KEFNALARKDLVTAMKRLQDMGASYFILDLRDNLGGLVQAGIEIAKLF 342
+VGY+R+ +E + R LV + R + + S +LDLR GG V +GI +
Sbjct: 129 NVGYLRVDDIPGQEVMSKLRSFLVANVWR-KLVNTSALVLDLRHCTGGHV-SGIPYVISY 186
Query: 343 LNEGETITY--TVGRDPQYQKTIV------------ADNSPLVTAPVIVLVNNRTASASE 388
L+ G T+++ TV P T + AD V+VL ++RT +E
Sbjct: 187 LHPGSTVSHVDTVYDRPSNTTTEIWTLPEALGEKYSADKD------VVVLTSSRTGGVAE 240
Query: 389 IVASALHDNCRAVLVGEKTFGKGL 412
+A L RA++VGE+T G L
Sbjct: 241 DIAYILKQMRRAIVVGERTVGGAL 264
Score = 37.7 bits (86), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 78/185 (42%), Gaps = 37/185 (20%)
Query: 289 VGYMRLKEFNALARKDLVTAM---------KRLQDMGASYFILDLRDNLGGLVQAGIEIA 339
+GY+R F+A+A + V A+ ++L D A ++DLR N G A +
Sbjct: 741 LGYLR---FDAMAELETVKAVGPQLVQLVWQKLVDTAA--LVVDLRYNPGSYSTAVPLLC 795
Query: 340 KLFLN-EGETITYTVGRDPQYQKTIVADNSPLVTAP-------VIVLVNNRTASASEIVA 391
F E Y+V D + P VT + VLV++ + SA+E A
Sbjct: 796 SYFFEAEPRRHLYSV-FDRATSRVTEVWTLPHVTGQRYGSHKDLYVLVSHTSGSAAEAFA 854
Query: 392 SALHDNCRAVLVGEKTFGKGLIQSVYELHDGSGVVVTIGKYVTPNHMDINGN-------- 443
+ D RA ++GE T G L +Y++ GS + P M ++ +
Sbjct: 855 HTMQDLQRATIIGEPTAGGALSVGIYQV--GSSALYA----SMPTQMAMSASTGEAWDLA 908
Query: 444 GIEPD 448
G+EPD
Sbjct: 909 GVEPD 913
>sp|P10745|RET3_HUMAN Retinol-binding protein 3 OS=Homo sapiens GN=RBP3 PE=1 SV=2
Length = 1247
Score = 40.4 bits (93), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 68/141 (48%), Gaps = 21/141 (14%)
Query: 288 SVGYMRLKEFNALARKDLVTAMKRL-------QDMGASYFILDLRDNLGGLVQAGIEIAK 340
+VGY+R+ +++ +++++ M MG S +LDLR GG V +GI
Sbjct: 129 NVGYLRV---DSVPGQEVLSMMGEFLVAHVWGNLMGTSALVLDLRHCTGGQV-SGIPYII 184
Query: 341 LFLNEGETITY--TVGRDPQYQKTIVADNSPLVTAP-------VIVLVNNRTASASEIVA 391
+L+ G TI + T+ P T + P V V+VL +++T +E +A
Sbjct: 185 SYLHPGNTILHVDTIYNRPSNTTTEIW-TLPQVLGERYGADKDVVVLTSSQTRGVAEDIA 243
Query: 392 SALHDNCRAVLVGEKTFGKGL 412
L RA++VGE+T G L
Sbjct: 244 HILKQMRRAIVVGERTGGGAL 264
Score = 34.7 bits (78), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 64/148 (43%), Gaps = 23/148 (15%)
Query: 289 VGYMRLKEFNALARKDLVTAM---------KRLQDMGASYFILDLRDNLGGLVQAGIEIA 339
+GY+R F+A+A + V A+ ++L D A ++DLR N G A +
Sbjct: 743 LGYLR---FDAMAELETVKAVGPQLVRLVWQQLVDTAA--LVIDLRYNPGSYSTAIPLLC 797
Query: 340 KLFLN-EGETITYTVGRDPQYQKTIVADNSPLVTAP-------VIVLVNNRTASASEIVA 391
F E Y+V D K P V + +L+++ + SA+E A
Sbjct: 798 SYFFEAEPRQHLYSV-FDRATSKVTEVWTLPQVAGQRYGSHKDLYILMSHTSGSAAEAFA 856
Query: 392 SALHDNCRAVLVGEKTFGKGLIQSVYEL 419
+ D RA ++GE T G L +Y++
Sbjct: 857 HTMQDLQRATVIGEPTAGGALSVGIYQV 884
>sp|P49194|RET3_MOUSE Retinol-binding protein 3 OS=Mus musculus GN=Rbp3 PE=2 SV=3
Length = 1234
Score = 40.0 bits (92), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 79/168 (47%), Gaps = 18/168 (10%)
Query: 258 GPIESIQVQRQLVARTPVFYRLEHLDNGTTSVGYMRL-----KEFNALARKDLVTAMKRL 312
P+ + + +L+A+ R E L+ +VGY+R+ +E + + LV+ + R
Sbjct: 102 APVLTNLTREELLAQIQRNIRHEVLEG---NVGYLRVDDLPGQEVLSELGEFLVSHVWR- 157
Query: 313 QDMGASYFILDLRDNLGGLVQAGIEIAKLFLNEGETITY--TVGRDPQYQKTIVADNSPL 370
Q MG S +LDLR GG +GI +L+ G T+ + TV P T + +
Sbjct: 158 QLMGTSSLVLDLRHCSGGHF-SGIPYVISYLHPGNTVMHVDTVYDRPSNTTTEIWTLPEV 216
Query: 371 V------TAPVIVLVNNRTASASEIVASALHDNCRAVLVGEKTFGKGL 412
+ V+VL + T +E +A L RA++VGE+T G L
Sbjct: 217 LGERYSADKDVVVLTSGHTGGVAEDIAYILKQMRRAIVVGERTEGGAL 264
Score = 38.5 bits (88), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 65/148 (43%), Gaps = 23/148 (15%)
Query: 289 VGYMRLKEFNALARKDLVTAM---------KRLQDMGASYFILDLRDNLGGLVQAGIEIA 339
+GY+R F+A+A + V A+ +RL D A I+DLR N G A +
Sbjct: 741 LGYLR---FDAMAELETVKAIGPQLVQLVWQRLVDTAA--LIVDLRYNPGSYSSAVPLLC 795
Query: 340 KLFLN-EGETITYTVGRDPQYQKTIVADNSPLVTAP-------VIVLVNNRTASASEIVA 391
F E Y+V D + PLV + +L+++ + SA+E A
Sbjct: 796 SYFFEAEPRQHLYSV-FDRATSRVTEIWTLPLVAGQRYGSHKDLYILMSHTSGSAAEAFA 854
Query: 392 SALHDNCRAVLVGEKTFGKGLIQSVYEL 419
+ D RA ++GE T G L +Y++
Sbjct: 855 HTMQDLQRATVIGEPTAGGALSVGIYQV 882
>sp|P31016|DLG4_RAT Disks large homolog 4 OS=Rattus norvegicus GN=Dlg4 PE=1 SV=1
Length = 724
Score = 40.0 bits (92), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 40/72 (55%), Gaps = 4/72 (5%)
Query: 180 SGIGINLREVPDANGVVTLKVLGLILDGPAHSAG-VRQGDEVLAVNGVDVRGKSAFEVSS 238
+G+G N+ D G+ +L GPA +G +R+GD++L+VNGVD+R S + +
Sbjct: 321 TGLGFNIVGGEDGEGIFISFILA---GGPADLSGELRKGDQILSVNGVDLRNASHEQAAI 377
Query: 239 LLQGPSETFVTI 250
L+ +T I
Sbjct: 378 ALKNAGQTVTII 389
>sp|Q62108|DLG4_MOUSE Disks large homolog 4 OS=Mus musculus GN=Dlg4 PE=1 SV=1
Length = 724
Score = 40.0 bits (92), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 40/72 (55%), Gaps = 4/72 (5%)
Query: 180 SGIGINLREVPDANGVVTLKVLGLILDGPAHSAG-VRQGDEVLAVNGVDVRGKSAFEVSS 238
+G+G N+ D G+ +L GPA +G +R+GD++L+VNGVD+R S + +
Sbjct: 321 TGLGFNIVGGEDGEGIFISFILA---GGPADLSGELRKGDQILSVNGVDLRNASHEQAAI 377
Query: 239 LLQGPSETFVTI 250
L+ +T I
Sbjct: 378 ALKNAGQTVTII 389
>sp|P78352|DLG4_HUMAN Disks large homolog 4 OS=Homo sapiens GN=DLG4 PE=1 SV=3
Length = 724
Score = 40.0 bits (92), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 40/72 (55%), Gaps = 4/72 (5%)
Query: 180 SGIGINLREVPDANGVVTLKVLGLILDGPAHSAG-VRQGDEVLAVNGVDVRGKSAFEVSS 238
+G+G N+ D G+ +L GPA +G +R+GD++L+VNGVD+R S + +
Sbjct: 321 TGLGFNIVGGEDGEGIFISFILA---GGPADLSGELRKGDQILSVNGVDLRNASHEQAAI 377
Query: 239 LLQGPSETFVTI 250
L+ +T I
Sbjct: 378 ALKNAGQTVTII 389
>sp|A5PKA5|SNX27_BOVIN Sorting nexin-27 OS=Bos taurus GN=SNX27 PE=2 SV=1
Length = 541
Score = 39.7 bits (91), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 43/82 (52%), Gaps = 11/82 (13%)
Query: 180 SGIGINLR-------EVPDANGVVTL---KVLGLILDGPAHSAGVRQGDEVLAVNGVDVR 229
SG G N+R ++ NG + V ++ G A AGVR+GD +L VNGV+V
Sbjct: 51 SGYGFNVRGQVSEGGQLRSINGELYAPLQHVSAVLPGGAADRAGVRKGDRILEVNGVNVE 110
Query: 230 GKSAFEVSSLLQ-GPSETFVTI 250
G + +V L++ G E +T+
Sbjct: 111 GATHKQVVDLIRAGEKELILTV 132
>sp|Q3UHD6|SNX27_MOUSE Sorting nexin-27 OS=Mus musculus GN=Snx27 PE=1 SV=2
Length = 539
Score = 39.7 bits (91), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 43/82 (52%), Gaps = 11/82 (13%)
Query: 180 SGIGINLR-------EVPDANGVVTL---KVLGLILDGPAHSAGVRQGDEVLAVNGVDVR 229
SG G N+R ++ NG + V ++ G A AGVR+GD +L VNGV+V
Sbjct: 49 SGYGFNVRGQVSEGGQLRSINGELYAPLQHVSAVLPGGAADRAGVRKGDRILEVNGVNVE 108
Query: 230 GKSAFEVSSLLQ-GPSETFVTI 250
G + +V L++ G E +T+
Sbjct: 109 GATHKQVVDLIRAGEKELILTV 130
>sp|Q8K4V4|SNX27_RAT Sorting nexin-27 OS=Rattus norvegicus GN=Snx27 PE=1 SV=2
Length = 539
Score = 39.7 bits (91), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 43/82 (52%), Gaps = 11/82 (13%)
Query: 180 SGIGINLR-------EVPDANGVVTL---KVLGLILDGPAHSAGVRQGDEVLAVNGVDVR 229
SG G N+R ++ NG + V ++ G A AGVR+GD +L VNGV+V
Sbjct: 49 SGYGFNVRGQVSEGGQLRSINGELYAPLQHVSAVLPGGAADRAGVRKGDRILEVNGVNVE 108
Query: 230 GKSAFEVSSLLQ-GPSETFVTI 250
G + +V L++ G E +T+
Sbjct: 109 GATHKQVVDLIRAGEKELILTV 130
>sp|Q69ZH9|RHG23_MOUSE Rho GTPase-activating protein 23 OS=Mus musculus GN=Arhgap23 PE=1
SV=2
Length = 1483
Score = 38.9 bits (89), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 26/41 (63%)
Query: 207 GPAHSAGVRQGDEVLAVNGVDVRGKSAFEVSSLLQGPSETF 247
GPAH AG+R GD ++ VNG + GK+ +V L+Q +T
Sbjct: 107 GPAHRAGLRTGDRLVKVNGESIIGKTYSQVIGLIQNSDDTL 147
>sp|Q5PYH5|DLG1L_DANRE Discs large homolog 1-like protein OS=Danio rerio GN=dlg1l PE=2
SV=1
Length = 827
Score = 38.5 bits (88), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 5/72 (6%)
Query: 180 SGIGINLREVPDANGVVTLKVLGLILDGPAHSAG-VRQGDEVLAVNGVDVRGKSAFEVSS 238
+G+G N+ D G+ +L GPA G +R+GD +++VNG+D+RG + + ++
Sbjct: 411 TGLGFNIVGGEDGEGIFISFILA---GGPADLCGELRKGDRLVSVNGIDLRGATHEQAAA 467
Query: 239 LLQGPSETFVTI 250
L+ +T VTI
Sbjct: 468 ALKNAGQT-VTI 478
>sp|Q6ZM86|GRD2I_DANRE Delphilin OS=Danio rerio GN=grid2ip PE=3 SV=1
Length = 1009
Score = 38.1 bits (87), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 25/36 (69%)
Query: 207 GPAHSAGVRQGDEVLAVNGVDVRGKSAFEVSSLLQG 242
PA + G++ GD +L +NG+D+R S +V S+LQG
Sbjct: 124 SPAEACGLKTGDRILFLNGLDMRNCSHEKVVSMLQG 159
>sp|Q9PL60|Y248_CHLMU Uncharacterized protein TC_0248 OS=Chlamydia muridarum (strain MoPn
/ Nigg) GN=TC_0248 PE=3 SV=1
Length = 601
Score = 38.1 bits (87), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Query: 372 TAPVIVLVNNRTASASEIVASALHDNCRAVLVGEKTFGKGLIQSVYELHDGSGV--VVTI 429
T P+ VL+N + S ++ + L DN RA++VG +T G G + + +G+
Sbjct: 478 TKPICVLINEQDFSCADFFPAILKDNDRALVVGTRTAGAGGFVFNVQFPNRTGIKSCSLT 537
Query: 430 GKYVTPNHMDINGN-GIEP 447
G H D+ N G+EP
Sbjct: 538 GSLAVREHGDLIENVGVEP 556
>sp|A2RUV4|RHG21_XENTR Rho GTPase-activating protein 21 OS=Xenopus tropicalis GN=arhgap21
PE=2 SV=1
Length = 1935
Score = 37.7 bits (86), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 25/41 (60%)
Query: 207 GPAHSAGVRQGDEVLAVNGVDVRGKSAFEVSSLLQGPSETF 247
GPAH AG+ GD ++ VNG V GK+ +V +L+Q T
Sbjct: 115 GPAHEAGLCTGDRIIKVNGESVIGKTYSQVIALIQNSDSTL 155
>sp|Q6R005|DLG4_DANRE Disks large homolog 4 OS=Danio rerio GN=dlg4 PE=2 SV=1
Length = 801
Score = 37.7 bits (86), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 40/73 (54%), Gaps = 6/73 (8%)
Query: 180 SGIGINLREVPDANGVVTLKVLGLILDGPAH--SAGVRQGDEVLAVNGVDVRGKSAFEVS 237
+G+G N+ D G+ + IL G A S +R+GD++L+VNGVD+R + + +
Sbjct: 401 TGLGFNIVGGEDGEGIF----ISFILAGGAADLSGELRKGDQILSVNGVDLRHATHEQAA 456
Query: 238 SLLQGPSETFVTI 250
+ L+ +T I
Sbjct: 457 AALKNAGQTVTII 469
>sp|Q71M21|RH21B_XENLA Rho GTPase-activating protein 21-B OS=Xenopus laevis GN=arhgap21-b
PE=2 SV=1
Length = 1902
Score = 37.7 bits (86), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 25/41 (60%)
Query: 207 GPAHSAGVRQGDEVLAVNGVDVRGKSAFEVSSLLQGPSETF 247
GPAH AG+ GD ++ VNG V GK+ +V +L+Q T
Sbjct: 114 GPAHEAGLCTGDRIIKVNGESVIGKTYSQVIALIQNSDSTL 154
>sp|Q6DFG0|RH21A_XENLA Rho GTPase-activating protein 21-A OS=Xenopus laevis GN=arhgap21-a
PE=2 SV=1
Length = 1926
Score = 37.7 bits (86), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 25/41 (60%)
Query: 207 GPAHSAGVRQGDEVLAVNGVDVRGKSAFEVSSLLQGPSETF 247
GPAH AG+ GD ++ VNG V GK+ +V +L+Q T
Sbjct: 114 GPAHEAGLCTGDRIIKVNGESVIGKTYSQVIALIQNSDSTL 154
>sp|Q5PYH6|DLG1_DANRE Disks large homolog 1 OS=Danio rerio GN=dlg1 PE=2 SV=2
Length = 873
Score = 37.7 bits (86), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 39/72 (54%), Gaps = 4/72 (5%)
Query: 180 SGIGINLREVPDANGVVTLKVLGLILDGPAHSAG-VRQGDEVLAVNGVDVRGKSAFEVSS 238
+G+G N+ D G+ +L GPA G +R+GD +++VNGVD+R + + ++
Sbjct: 482 TGLGFNIVGGEDGEGIFISFILA---GGPADLCGELRKGDRIVSVNGVDLRSATHEQAAA 538
Query: 239 LLQGPSETFVTI 250
L+ +T I
Sbjct: 539 ALKNAGQTVTII 550
>sp|Q9RKB9|TRI2_STRCO Putative tricorn protease homolog 2 OS=Streptomyces coelicolor
(strain ATCC BAA-471 / A3(2) / M145) GN=tri2 PE=3 SV=1
Length = 1171
Score = 37.7 bits (86), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 102/264 (38%), Gaps = 40/264 (15%)
Query: 208 PAHSAGVRQGDEVLAVNGVDVRGKSAFEVSSLLQGPSETFV--TIEVKHGNCGPIESIQV 265
P G+R G + V+G V S LL G T V T G GP + V
Sbjct: 878 PLAGTGIRDGAVLTHVDGRPV--DPVLGPSPLLAGAGGTTVELTFAPAEGCQGPSRRVAV 935
Query: 266 QRQLVARTPVFYR---------LEHLDNGTTSVGYMRLKEFN----ALARKDLVTAMKRL 312
LV P+ Y+ + L G GY+ + + A +DL + R
Sbjct: 936 V-PLVDERPLRYQDWVAKRREVVRELSGG--RCGYLHIPDMGGSGWAQFNRDLRMEVSR- 991
Query: 313 QDMGASYFILDLRDNLGGLVQAGIEIAKLFLNEGETITYTV-GRDPQYQKTIVADNSPLV 371
I+D+R N GG I++L + E +T T+ G D V+ S
Sbjct: 992 -----PALIVDVRGNAGG------HISELVI---EKLTRTILGWDLTRDAQPVSYTSNAP 1037
Query: 372 TAPVIVLVNNRTASASEIVASALHDNCRAVLVGEKTFGKGLIQSVYELHDGSGVVVTI-- 429
PV+ + + T+S +++ +A +VG++T+G G++ G G V+T+
Sbjct: 1038 RGPVVAVADEATSSDGDMITAAFKLLRLGPVVGQRTWG-GVVGMTGRHRLGDGSVITVPM 1096
Query: 430 -GKYVTPNHMDINGNGIEPDYRNL 452
+ + G+ PD L
Sbjct: 1097 NAAWFDAYGWSVENYGVAPDVEAL 1120
>sp|Q3MHQ0|USH1C_BOVIN Harmonin OS=Bos taurus GN=USH1C PE=2 SV=1
Length = 551
Score = 37.4 bits (85), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 38/60 (63%), Gaps = 2/60 (3%)
Query: 203 LILDGPAHSAGVRQGDEVLAVNGVDVRGKSAFEVSSLLQGPSETFVTIEVKHGNCGPIES 262
LI DG A S G++ GDE++ +NG + + EV +L++ ++ V+I+V+H P++S
Sbjct: 117 LIKDGQADSVGLQVGDEIVRINGYSISSCTHEEVINLIR--TKKTVSIKVRHIGLIPVKS 174
>sp|Q6AYQ0|MAGIX_RAT PDZ domain-containing protein MAGIX OS=Rattus norvegicus GN=Magix
PE=2 SV=1
Length = 326
Score = 37.4 bits (85), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 180 SGIGINLREVPDANGVVTLKVLGLILDGPAHSAG-VRQGDEVLAVNGVDVRG 230
+G G+ L + +G V L V GL+ DGPA G ++ GD VL +NG RG
Sbjct: 136 AGFGLTLSGGRNVSGNVPLAVCGLLKDGPAQRCGHLQAGDLVLYINGQSTRG 187
>sp|Q9JLB2|MPP5_MOUSE MAGUK p55 subfamily member 5 OS=Mus musculus GN=Mpp5 PE=1 SV=1
Length = 675
Score = 37.4 bits (85), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 68/162 (41%), Gaps = 22/162 (13%)
Query: 207 GPAHSAGV-RQGDEVLAVNGVDVRGKSAFEVSSLLQGP--SETFVTIEVKHGNCGPIESI 263
G A +G+ +GDEVL +NG+++RGK EV LL + TFV I + P
Sbjct: 287 GAAEKSGLLHEGDEVLEINGIEIRGKDVNEVFDLLSDMHGTLTFVLIPSQQIKPPP---- 342
Query: 264 QVQRQLVARTPVFYRLEHLDNGTTSVGYMRLKEFN-ALARKDLVTAMKRLQDMGASYFIL 322
A+ V + H D + Y+ +E + + D++ + + +
Sbjct: 343 -------AKETVIHVKAHFDYDPSDDPYVPCRELGLSFQKGDILHVISQEDPNWWQAYRE 395
Query: 323 DLRDN--LGGLVQAGIEIAKLFLNEGETITYTVGRDPQYQKT 362
DN L GLV K F + E + T+ D + +K+
Sbjct: 396 GDEDNQPLAGLVP-----GKSFQQQREAMKQTIEEDKEPEKS 432
>sp|Q8N3R9|MPP5_HUMAN MAGUK p55 subfamily member 5 OS=Homo sapiens GN=MPP5 PE=1 SV=3
Length = 675
Score = 37.4 bits (85), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 68/162 (41%), Gaps = 22/162 (13%)
Query: 207 GPAHSAGV-RQGDEVLAVNGVDVRGKSAFEVSSLLQGP--SETFVTIEVKHGNCGPIESI 263
G A +G+ +GDEVL +NG+++RGK EV LL + TFV I + P
Sbjct: 287 GAAEKSGLLHEGDEVLEINGIEIRGKDVNEVFDLLSDMHGTLTFVLIPSQQIKPPP---- 342
Query: 264 QVQRQLVARTPVFYRLEHLDNGTTSVGYMRLKEFN-ALARKDLVTAMKRLQDMGASYFIL 322
A+ V + H D + Y+ +E + + D++ + + +
Sbjct: 343 -------AKETVIHVKAHFDYDPSDDPYVPCRELGLSFQKGDILHVISQEDPNWWQAYRE 395
Query: 323 DLRDN--LGGLVQAGIEIAKLFLNEGETITYTVGRDPQYQKT 362
DN L GLV K F + E + T+ D + +K+
Sbjct: 396 GDEDNQPLAGLVP-----GKSFQQQREAMKQTIEEDKEPEKS 432
>sp|Q5RDQ2|MPP5_PONAB MAGUK p55 subfamily member 5 OS=Pongo abelii GN=MPP5 PE=2 SV=1
Length = 675
Score = 37.4 bits (85), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 68/162 (41%), Gaps = 22/162 (13%)
Query: 207 GPAHSAGV-RQGDEVLAVNGVDVRGKSAFEVSSLLQGP--SETFVTIEVKHGNCGPIESI 263
G A +G+ +GDEVL +NG+++RGK EV LL + TFV I + P
Sbjct: 287 GAAEKSGLLHEGDEVLEINGIEIRGKDVNEVFDLLADMHGTLTFVLIPSQQIKPPP---- 342
Query: 264 QVQRQLVARTPVFYRLEHLDNGTTSVGYMRLKEFN-ALARKDLVTAMKRLQDMGASYFIL 322
A+ V + H D + Y+ +E + + D++ + + +
Sbjct: 343 -------AKETVIHVKAHFDYDPSDDPYVPCRELGLSFQKGDILHVISQEDPNWWQAYRE 395
Query: 323 DLRDN--LGGLVQAGIEIAKLFLNEGETITYTVGRDPQYQKT 362
DN L GLV K F + E + T+ D + +K+
Sbjct: 396 GDEDNQPLAGLVP-----GKSFQQQREAMKQTIEEDKEPEKS 432
>sp|P23648|NSR_LACLL Nisin-resistance protein OS=Lactococcus lactis subsp. lactis GN=nsr
PE=4 SV=1
Length = 318
Score = 37.0 bits (84), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 51/121 (42%), Gaps = 13/121 (10%)
Query: 321 ILDLRDNLGGLVQAGIEIAKLFLNEGETITY----TVGRDPQYQK---------TIVADN 367
I+DLR N GG + + L +G TY + + + Q T ++DN
Sbjct: 159 IVDLRGNRGGDLSPMVLGLSPLLPDGTLFTYVDKSSHSKPVELQNGEINSGGSSTKISDN 218
Query: 368 SPLVTAPVIVLVNNRTASASEIVASALHDNCRAVLVGEKTFGKGLIQSVYELHDGSGVVV 427
+ AP+ VL++N T S+ E+ A +G + G L+DGS + +
Sbjct: 219 KKIKKAPIAVLIDNNTGSSGELTALCFEGIPNVKFLGSDSAGYTSANQTVYLYDGSTLQI 278
Query: 428 T 428
T
Sbjct: 279 T 279
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.132 0.378
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 167,662,328
Number of Sequences: 539616
Number of extensions: 7088585
Number of successful extensions: 22803
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 87
Number of HSP's successfully gapped in prelim test: 107
Number of HSP's that attempted gapping in prelim test: 22497
Number of HSP's gapped (non-prelim): 377
length of query: 454
length of database: 191,569,459
effective HSP length: 121
effective length of query: 333
effective length of database: 126,275,923
effective search space: 42049882359
effective search space used: 42049882359
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 63 (28.9 bits)