Query 012891
Match_columns 454
No_of_seqs 386 out of 2805
Neff 7.5
Searched_HMMs 46136
Date Fri Mar 29 07:23:23 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012891.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/012891hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG0484 DnaJ DnaJ-class molecu 100.0 2.5E-90 5.4E-95 685.3 35.1 337 79-433 1-351 (371)
2 PRK14296 chaperone protein Dna 100.0 2.9E-81 6.3E-86 637.1 35.2 342 81-433 3-362 (372)
3 PRK14288 chaperone protein Dna 100.0 3.6E-80 7.8E-85 628.9 33.4 332 81-432 2-345 (369)
4 PRK14279 chaperone protein Dna 100.0 1.9E-79 4.1E-84 627.8 35.5 352 80-433 7-379 (392)
5 PRK14286 chaperone protein Dna 100.0 1.1E-78 2.3E-83 618.7 35.8 341 81-434 3-359 (372)
6 PRK14284 chaperone protein Dna 100.0 5.9E-78 1.3E-82 617.5 35.9 366 82-450 1-389 (391)
7 PRK14277 chaperone protein Dna 100.0 1.2E-77 2.7E-82 614.1 36.1 347 81-433 4-366 (386)
8 PRK14295 chaperone protein Dna 100.0 3E-77 6.6E-82 610.9 36.9 350 80-433 7-373 (389)
9 PRK14298 chaperone protein Dna 100.0 1.6E-77 3.4E-82 610.7 34.7 335 81-433 4-352 (377)
10 PRK14278 chaperone protein Dna 100.0 5.7E-77 1.2E-81 607.3 36.5 332 82-433 3-351 (378)
11 PRK14276 chaperone protein Dna 100.0 3.8E-77 8.2E-82 609.4 35.2 339 81-433 3-357 (380)
12 PRK14285 chaperone protein Dna 100.0 5.6E-77 1.2E-81 604.7 35.6 343 81-435 2-356 (365)
13 PRK14294 chaperone protein Dna 100.0 4.6E-77 1E-81 606.3 35.0 350 81-449 3-365 (366)
14 PRK14301 chaperone protein Dna 100.0 6.6E-77 1.4E-81 605.8 34.9 352 81-450 3-366 (373)
15 PRK14297 chaperone protein Dna 100.0 9E-77 2E-81 607.0 36.1 340 81-433 3-359 (380)
16 PRK14287 chaperone protein Dna 100.0 7.9E-77 1.7E-81 604.8 35.4 332 81-433 3-349 (371)
17 PRK14280 chaperone protein Dna 100.0 1.1E-76 2.3E-81 605.3 36.2 337 81-433 3-354 (376)
18 PTZ00037 DnaJ_C chaperone prot 100.0 5.7E-77 1.2E-81 611.3 32.0 326 76-432 22-366 (421)
19 PRK10767 chaperone protein Dna 100.0 3.8E-76 8.3E-81 601.3 36.7 336 81-432 3-348 (371)
20 PRK14282 chaperone protein Dna 100.0 7.3E-76 1.6E-80 598.1 36.4 343 81-433 3-364 (369)
21 PRK14281 chaperone protein Dna 100.0 5.4E-76 1.2E-80 603.6 35.6 349 81-432 2-372 (397)
22 PRK14300 chaperone protein Dna 100.0 1.3E-74 2.8E-79 589.1 35.6 339 82-433 3-353 (372)
23 PRK14291 chaperone protein Dna 100.0 4.3E-74 9.3E-79 587.3 34.3 347 81-433 2-371 (382)
24 PRK14283 chaperone protein Dna 100.0 6.6E-74 1.4E-78 585.5 35.1 342 80-432 3-356 (378)
25 TIGR02349 DnaJ_bact chaperone 100.0 1.1E-73 2.3E-78 580.4 34.5 336 83-432 1-353 (354)
26 PRK14290 chaperone protein Dna 100.0 1.9E-73 4E-78 579.7 35.1 347 82-438 3-362 (365)
27 PRK14289 chaperone protein Dna 100.0 5.2E-73 1.1E-77 580.8 35.0 349 81-433 4-365 (386)
28 PRK14293 chaperone protein Dna 100.0 2.9E-72 6.3E-77 572.7 34.0 344 82-433 3-355 (374)
29 PRK14292 chaperone protein Dna 100.0 8.2E-71 1.8E-75 562.1 34.0 330 82-433 2-349 (371)
30 KOG0712 Molecular chaperone (D 100.0 6.5E-67 1.4E-71 511.5 24.9 321 81-430 3-337 (337)
31 PRK14299 chaperone protein Dna 100.0 1.6E-58 3.4E-63 456.7 29.7 269 81-433 3-287 (291)
32 PRK10266 curved DNA-binding pr 100.0 5.7E-57 1.2E-61 448.8 31.2 284 81-432 3-293 (306)
33 TIGR03835 termin_org_DnaJ term 100.0 2.4E-41 5.1E-46 354.9 26.9 173 206-433 660-835 (871)
34 KOG0713 Molecular chaperone (D 100.0 5.5E-43 1.2E-47 338.7 10.5 311 80-420 14-328 (336)
35 KOG0715 Molecular chaperone (D 100.0 6.4E-40 1.4E-44 321.5 14.0 240 82-357 43-288 (288)
36 KOG0714 Molecular chaperone (D 99.9 4.3E-22 9.3E-27 196.2 15.7 264 81-396 2-305 (306)
37 PF01556 CTDII: DnaJ C termina 99.9 1.9E-21 4.1E-26 156.0 8.4 80 346-425 1-81 (81)
38 KOG0716 Molecular chaperone (D 99.8 1.6E-19 3.6E-24 170.2 5.1 72 81-152 30-101 (279)
39 COG2214 CbpA DnaJ-class molecu 99.7 1.6E-17 3.6E-22 156.5 13.3 68 80-147 4-72 (237)
40 KOG0691 Molecular chaperone (D 99.7 2.3E-18 5E-23 168.0 6.4 73 81-153 4-76 (296)
41 PF00226 DnaJ: DnaJ domain; I 99.7 5.8E-18 1.3E-22 129.5 5.9 63 83-145 1-64 (64)
42 KOG0718 Molecular chaperone (D 99.7 5.9E-18 1.3E-22 169.4 5.8 75 80-154 7-84 (546)
43 PTZ00341 Ring-infected erythro 99.7 7E-18 1.5E-22 182.4 6.1 74 79-153 570-643 (1136)
44 KOG0717 Molecular chaperone (D 99.7 1.1E-17 2.5E-22 167.4 5.7 71 79-149 5-76 (508)
45 KOG0719 Molecular chaperone (D 99.6 1.4E-16 3.1E-21 146.8 6.0 69 80-148 12-82 (264)
46 smart00271 DnaJ DnaJ molecular 99.6 3.7E-16 8.1E-21 117.7 6.2 59 82-140 1-60 (60)
47 COG0484 DnaJ DnaJ-class molecu 99.6 2.4E-15 5.3E-20 150.4 12.6 133 206-342 134-338 (371)
48 cd06257 DnaJ DnaJ domain or J- 99.6 1.5E-15 3.2E-20 112.3 6.4 55 83-137 1-55 (55)
49 PHA03102 Small T antigen; Revi 99.6 1.1E-15 2.4E-20 135.6 5.9 66 82-151 5-72 (153)
50 KOG0624 dsRNA-activated protei 99.6 1.6E-15 3.5E-20 147.5 7.5 69 79-147 391-462 (504)
51 KOG0721 Molecular chaperone (D 99.6 2.4E-15 5.2E-20 137.7 6.3 71 79-149 96-166 (230)
52 PRK05014 hscB co-chaperone Hsc 99.5 5.5E-14 1.2E-18 128.3 6.7 66 82-147 1-73 (171)
53 PRK01356 hscB co-chaperone Hsc 99.5 9E-14 1.9E-18 126.2 6.4 67 82-148 2-73 (166)
54 PRK03578 hscB co-chaperone Hsc 99.4 1.4E-13 3.1E-18 125.9 7.0 67 81-147 5-78 (176)
55 PRK00294 hscB co-chaperone Hsc 99.4 1.7E-13 3.6E-18 125.0 7.3 69 80-148 2-77 (173)
56 PRK14282 chaperone protein Dna 99.4 3.9E-13 8.5E-18 137.5 10.4 140 207-350 145-359 (369)
57 PRK14290 chaperone protein Dna 99.4 8.4E-13 1.8E-17 134.9 9.8 140 208-351 143-353 (365)
58 PRK14298 chaperone protein Dna 99.4 1.2E-12 2.7E-17 134.1 9.5 141 207-351 134-348 (377)
59 KOG0550 Molecular chaperone (D 99.4 3.7E-13 7.9E-18 134.1 5.0 69 79-147 370-439 (486)
60 PRK14294 chaperone protein Dna 99.4 1.8E-12 3.9E-17 132.6 9.5 118 229-350 161-346 (366)
61 KOG0720 Molecular chaperone (D 99.3 6.3E-13 1.4E-17 133.8 5.2 67 81-148 234-300 (490)
62 PRK14285 chaperone protein Dna 99.3 2.7E-12 5.9E-17 131.0 9.6 139 207-349 139-348 (365)
63 PRK10767 chaperone protein Dna 99.3 3.2E-12 6.9E-17 131.1 9.4 141 207-351 135-345 (371)
64 PTZ00100 DnaJ chaperone protei 99.3 1.4E-12 3E-17 110.1 5.4 54 79-136 62-115 (116)
65 KOG0722 Molecular chaperone (D 99.3 5.3E-13 1.1E-17 124.7 3.0 67 81-148 32-98 (329)
66 PRK14301 chaperone protein Dna 99.3 6E-12 1.3E-16 128.9 9.0 137 207-347 137-343 (373)
67 PRK14284 chaperone protein Dna 99.3 1.3E-11 2.7E-16 127.3 9.3 138 207-348 151-360 (391)
68 PRK14287 chaperone protein Dna 99.3 1.1E-11 2.4E-16 126.8 8.6 138 207-348 131-342 (371)
69 TIGR02349 DnaJ_bact chaperone 99.3 1.3E-11 2.7E-16 125.9 8.6 137 207-347 136-346 (354)
70 PRK14300 chaperone protein Dna 99.3 3.4E-11 7.4E-16 123.4 11.7 132 207-342 138-340 (372)
71 PRK14288 chaperone protein Dna 99.3 4.6E-11 9.9E-16 122.2 12.5 134 207-344 133-335 (369)
72 PRK09430 djlA Dna-J like membr 99.2 8.6E-12 1.9E-16 121.9 6.3 60 79-138 197-263 (267)
73 PRK14278 chaperone protein Dna 99.2 4.9E-11 1.1E-15 122.4 11.7 128 207-338 132-334 (378)
74 PRK14281 chaperone protein Dna 99.2 7.2E-11 1.6E-15 122.0 11.6 128 207-338 156-356 (397)
75 PRK14276 chaperone protein Dna 99.2 6.5E-11 1.4E-15 121.6 11.1 129 207-339 139-341 (380)
76 PRK14279 chaperone protein Dna 99.2 7.4E-11 1.6E-15 121.6 11.4 128 207-339 166-363 (392)
77 PRK14286 chaperone protein Dna 99.2 3.5E-11 7.6E-16 123.2 8.8 133 207-343 143-346 (372)
78 PRK14280 chaperone protein Dna 99.2 9.2E-11 2E-15 120.4 11.6 129 207-339 136-338 (376)
79 PRK14293 chaperone protein Dna 99.2 4.6E-11 1E-15 122.6 8.7 118 229-350 160-350 (374)
80 PRK14289 chaperone protein Dna 99.2 9.5E-11 2.1E-15 120.8 10.6 127 207-337 147-347 (386)
81 PRK14297 chaperone protein Dna 99.2 1.2E-10 2.5E-15 119.9 11.0 128 207-338 141-342 (380)
82 PRK14292 chaperone protein Dna 99.2 7.4E-11 1.6E-15 121.0 9.2 135 208-346 133-340 (371)
83 PHA02624 large T antigen; Prov 99.2 2.6E-11 5.6E-16 128.1 5.4 60 81-144 10-71 (647)
84 PRK14295 chaperone protein Dna 99.2 1.5E-10 3.2E-15 119.3 10.7 127 207-338 159-356 (389)
85 PRK14291 chaperone protein Dna 99.1 2.1E-10 4.6E-15 118.0 11.5 126 207-337 149-345 (382)
86 PRK14277 chaperone protein Dna 99.1 2E-10 4.4E-15 118.2 11.2 128 207-338 148-349 (386)
87 PRK14296 chaperone protein Dna 99.1 2.5E-10 5.4E-15 116.9 11.0 128 207-338 142-345 (372)
88 PF00684 DnaJ_CXXCXGXG: DnaJ c 99.1 4.9E-11 1.1E-15 91.7 3.6 57 232-288 1-66 (66)
89 PTZ00037 DnaJ_C chaperone prot 99.1 3.8E-10 8.3E-15 116.9 11.0 108 228-337 165-347 (421)
90 PRK01773 hscB co-chaperone Hsc 99.1 1.4E-10 3.1E-15 105.8 6.8 68 82-149 2-76 (173)
91 PRK14283 chaperone protein Dna 99.1 2.5E-10 5.4E-15 117.3 8.8 105 229-337 163-339 (378)
92 COG5407 SEC63 Preprotein trans 99.1 9E-11 1.9E-15 117.7 5.1 70 81-150 97-171 (610)
93 TIGR00714 hscB Fe-S protein as 99.0 5.4E-10 1.2E-14 100.7 6.2 57 93-149 2-63 (157)
94 KOG1150 Predicted molecular ch 98.9 1.4E-09 3.1E-14 98.5 5.3 66 80-145 51-117 (250)
95 PRK14299 chaperone protein Dna 98.8 1.8E-08 3.8E-13 100.1 9.3 70 340-417 125-195 (291)
96 COG5269 ZUO1 Ribosome-associat 98.7 7.4E-09 1.6E-13 97.9 3.7 74 75-148 36-114 (379)
97 PRK10266 curved DNA-binding pr 98.6 1.4E-07 3E-12 94.4 9.6 74 342-417 115-202 (306)
98 PF01556 CTDII: DnaJ C termina 98.5 1.3E-07 2.8E-12 75.7 5.7 45 294-338 27-72 (81)
99 PLN03165 chaperone protein dna 98.4 3.3E-07 7.1E-12 77.1 3.8 55 228-291 40-99 (111)
100 KOG0712 Molecular chaperone (D 98.3 9.1E-07 2E-11 88.0 7.1 43 295-338 280-324 (337)
101 KOG1789 Endocytosis protein RM 98.3 8E-07 1.7E-11 97.1 5.7 58 76-136 1275-1336(2235)
102 KOG0568 Molecular chaperone (D 98.3 7.6E-07 1.7E-11 82.6 4.5 57 81-138 46-103 (342)
103 TIGR02642 phage_xxxx uncharact 98.1 4.1E-06 9E-11 77.0 4.9 48 265-313 100-149 (186)
104 KOG0723 Molecular chaperone (D 97.8 2.9E-05 6.3E-10 63.8 4.3 58 77-138 51-108 (112)
105 TIGR03835 termin_org_DnaJ term 97.7 0.00017 3.8E-09 78.1 9.4 70 82-152 2-71 (871)
106 KOG3192 Mitochondrial J-type c 97.6 8.4E-05 1.8E-09 65.4 4.3 69 79-147 5-80 (168)
107 COG1107 Archaea-specific RecJ- 97.5 8.3E-05 1.8E-09 77.8 3.5 45 380-432 258-302 (715)
108 PF00684 DnaJ_CXXCXGXG: DnaJ c 97.3 0.00011 2.4E-09 56.4 2.0 44 228-274 14-66 (66)
109 COG1107 Archaea-specific RecJ- 96.6 0.0018 3.9E-08 68.1 3.6 24 265-288 54-78 (715)
110 PLN03165 chaperone protein dna 96.5 0.0019 4.1E-08 54.5 2.7 41 231-278 54-100 (111)
111 COG1076 DjlA DnaJ-domain-conta 96.4 0.0029 6.3E-08 58.1 3.4 69 83-151 2-77 (174)
112 KOG2813 Predicted molecular ch 96.2 0.0046 1E-07 60.5 3.9 31 266-299 247-277 (406)
113 COG1076 DjlA DnaJ-domain-conta 96.1 0.003 6.6E-08 58.0 2.2 54 82-135 113-173 (174)
114 KOG0431 Auxilin-like protein a 95.5 0.015 3.3E-07 61.1 4.4 47 89-135 395-448 (453)
115 TIGR02642 phage_xxxx uncharact 95.2 0.016 3.5E-07 53.5 3.3 28 248-277 101-128 (186)
116 KOG2813 Predicted molecular ch 94.3 0.025 5.4E-07 55.5 2.2 57 230-290 199-257 (406)
117 PF03656 Pam16: Pam16; InterP 92.4 0.31 6.8E-06 42.2 5.7 59 79-141 55-113 (127)
118 KOG0715 Molecular chaperone (D 86.2 0.81 1.7E-05 45.5 4.0 49 225-277 177-230 (288)
119 KOG2824 Glutaredoxin-related p 85.5 0.81 1.8E-05 44.5 3.5 36 248-290 231-274 (281)
120 cd03031 GRX_GRX_like Glutaredo 80.8 1.7 3.6E-05 38.8 3.3 23 230-258 100-122 (147)
121 PF14687 DUF4460: Domain of un 80.5 3.7 8E-05 34.8 5.2 47 92-138 4-54 (112)
122 PF11833 DUF3353: Protein of u 80.2 4.2 9.1E-05 38.0 5.9 39 91-137 1-39 (194)
123 KOG0724 Zuotin and related mol 79.0 1.9 4E-05 43.7 3.5 54 94-147 4-61 (335)
124 KOG2824 Glutaredoxin-related p 77.3 2.4 5.3E-05 41.3 3.5 47 230-285 230-280 (281)
125 PF13446 RPT: A repeated domai 76.6 4.4 9.5E-05 30.3 4.0 27 82-108 5-31 (62)
126 TIGR00630 uvra excinuclease AB 73.7 2.1 4.6E-05 49.2 2.4 23 411-433 854-877 (924)
127 COG1198 PriA Primosomal protei 64.5 5.2 0.00011 44.7 2.9 51 228-287 434-484 (730)
128 PRK14714 DNA polymerase II lar 64.2 4.8 0.0001 47.0 2.6 54 229-292 667-723 (1337)
129 PRK00349 uvrA excinuclease ABC 62.5 4.5 9.7E-05 46.8 2.0 15 279-293 762-776 (943)
130 PRK04023 DNA polymerase II lar 62.1 5.2 0.00011 45.7 2.4 65 212-289 609-674 (1121)
131 cd03031 GRX_GRX_like Glutaredo 61.9 7.9 0.00017 34.5 3.1 38 246-290 99-145 (147)
132 smart00709 Zpr1 Duplicated dom 59.9 14 0.0003 33.4 4.3 20 295-314 81-100 (160)
133 PRK00635 excinuclease ABC subu 58.8 5.7 0.00012 48.7 2.1 28 404-434 1721-1749(1809)
134 TIGR00630 uvra excinuclease AB 57.9 4.7 0.0001 46.5 1.2 29 265-293 737-774 (924)
135 TIGR00310 ZPR1_znf ZPR1 zinc f 57.2 21 0.00046 33.3 5.2 20 295-314 80-100 (192)
136 PF09538 FYDLN_acid: Protein o 50.6 9.5 0.00021 32.1 1.6 27 227-253 7-33 (108)
137 PRK14873 primosome assembly pr 50.4 13 0.00028 41.4 3.1 49 229-287 383-431 (665)
138 PF07709 SRR: Seven Residue Re 50.4 9 0.00019 19.9 0.9 13 124-136 2-14 (14)
139 PF03833 PolC_DP2: DNA polymer 50.1 5.3 0.00012 44.8 0.0 50 229-290 655-704 (900)
140 TIGR00595 priA primosomal prot 49.4 12 0.00027 40.2 2.6 50 229-287 213-262 (505)
141 PRK00349 uvrA excinuclease ABC 48.5 12 0.00027 43.2 2.6 32 247-278 739-775 (943)
142 PF12991 DUF3875: Domain of un 46.9 22 0.00048 25.9 2.7 24 403-426 27-52 (54)
143 COG5552 Uncharacterized conser 46.5 73 0.0016 24.8 5.6 31 83-113 4-34 (88)
144 PRK05580 primosome assembly pr 46.3 14 0.0003 41.3 2.5 50 229-287 381-430 (679)
145 PF10041 DUF2277: Uncharacteri 45.9 97 0.0021 24.3 6.3 51 86-137 7-61 (78)
146 PRK03564 formate dehydrogenase 45.5 22 0.00048 35.6 3.6 10 229-238 187-196 (309)
147 PF14353 CpXC: CpXC protein 44.6 17 0.00037 31.2 2.3 14 263-276 37-50 (128)
148 COG0178 UvrA Excinuclease ATPa 43.7 14 0.0003 41.7 1.9 28 265-292 731-767 (935)
149 PRK12336 translation initiatio 43.5 64 0.0014 30.3 6.1 14 226-239 95-108 (201)
150 cd02639 R3H_RRM R3H domain of 43.4 35 0.00075 25.6 3.5 29 409-437 17-45 (60)
151 PF04246 RseC_MucC: Positive r 43.1 37 0.00079 29.5 4.2 22 293-314 41-62 (135)
152 PF12434 Malate_DH: Malate deh 42.5 27 0.00058 21.7 2.2 17 96-112 10-26 (28)
153 PRK05978 hypothetical protein; 41.5 14 0.00031 32.9 1.3 8 278-285 52-59 (148)
154 TIGR02300 FYDLN_acid conserved 40.5 18 0.00038 31.3 1.7 28 227-254 7-34 (129)
155 TIGR00340 zpr1_rel ZPR1-relate 39.0 42 0.0009 30.5 4.0 20 295-314 78-98 (163)
156 PF07295 DUF1451: Protein of u 36.6 34 0.00073 30.5 2.9 35 242-276 108-142 (146)
157 PRK00564 hypA hydrogenase nick 35.2 48 0.0011 28.2 3.6 38 219-256 60-98 (117)
158 PF07092 DUF1356: Protein of u 32.4 25 0.00055 33.8 1.5 12 247-258 39-50 (238)
159 PRK00635 excinuclease ABC subu 31.9 17 0.00037 44.8 0.4 28 266-293 1609-1645(1809)
160 PF07092 DUF1356: Protein of u 31.7 22 0.00047 34.2 0.9 15 229-243 38-52 (238)
161 PF08792 A2L_zn_ribbon: A2L zi 31.0 30 0.00066 22.6 1.3 11 248-258 5-15 (33)
162 smart00276 GLECT Galectin. Gal 30.9 63 0.0014 27.6 3.7 42 375-416 3-49 (128)
163 PRK12380 hydrogenase nickel in 30.7 55 0.0012 27.7 3.2 37 219-256 59-96 (113)
164 COG3635 Predicted phosphoglyce 30.6 1.4E+02 0.003 30.9 6.4 94 298-396 49-163 (408)
165 TIGR01562 FdhE formate dehydro 29.1 57 0.0012 32.7 3.5 16 99-114 100-115 (305)
166 COG0178 UvrA Excinuclease ATPa 29.0 46 0.001 37.7 3.0 32 247-278 731-767 (935)
167 PF09862 DUF2089: Protein of u 27.4 45 0.00098 28.3 2.0 20 267-286 1-20 (113)
168 cd06007 R3H_DEXH_helicase R3H 26.7 94 0.002 23.1 3.5 26 409-434 16-41 (59)
169 PRK14051 negative regulator Gr 26.3 1.9E+02 0.004 24.3 5.4 70 326-396 48-119 (123)
170 PF03589 Antiterm: Antitermina 25.9 36 0.00078 27.9 1.2 11 266-276 34-44 (95)
171 COG5435 Uncharacterized conser 25.6 1.4E+02 0.0031 26.5 4.9 36 402-437 108-143 (147)
172 PF08774 VRR_NUC: VRR-NUC doma 25.1 1.5E+02 0.0032 23.9 4.8 27 406-432 62-89 (100)
173 cd02641 R3H_Smubp-2_like R3H d 24.4 1E+02 0.0022 22.9 3.3 25 410-434 18-42 (60)
174 PF10925 DUF2680: Protein of u 24.2 1E+02 0.0022 23.0 3.2 31 418-454 1-31 (59)
175 TIGR00100 hypA hydrogenase nic 24.2 72 0.0016 27.0 2.8 11 227-237 68-78 (115)
176 PRK03681 hypA hydrogenase nick 24.1 72 0.0016 27.0 2.8 19 219-237 59-78 (114)
177 PRK11032 hypothetical protein; 23.1 76 0.0016 28.7 2.8 16 98-113 3-18 (160)
178 PRK00398 rpoP DNA-directed RNA 22.9 64 0.0014 22.4 1.9 7 248-254 5-11 (46)
179 cd01388 SOX-TCF_HMG-box SOX-TC 22.7 1.5E+02 0.0033 22.4 4.1 42 101-147 14-55 (72)
180 KOG0315 G-protein beta subunit 22.7 86 0.0019 30.6 3.2 31 349-379 18-50 (311)
181 cd02640 R3H_NRF R3H domain of 22.6 1.2E+02 0.0026 22.6 3.4 26 409-434 17-42 (60)
182 PRK14559 putative protein seri 21.7 58 0.0013 36.2 2.1 49 230-287 2-50 (645)
183 PF13719 zinc_ribbon_5: zinc-r 21.7 43 0.00092 22.3 0.7 10 230-239 3-12 (37)
184 TIGR03655 anti_R_Lar restricti 21.7 1.1E+02 0.0024 21.9 3.0 10 248-257 3-12 (53)
185 COG3058 FdhE Uncharacterized p 21.5 38 0.00081 33.3 0.6 58 226-287 182-261 (308)
186 PF09297 zf-NADH-PPase: NADH p 21.5 62 0.0013 20.6 1.4 8 264-271 21-28 (32)
187 KOG3442 Uncharacterized conser 21.4 1.2E+02 0.0025 26.3 3.4 55 82-140 59-113 (132)
188 PF01155 HypA: Hydrogenase exp 21.2 61 0.0013 27.3 1.7 29 227-256 68-96 (113)
189 PF08273 Prim_Zn_Ribbon: Zinc- 21.2 60 0.0013 22.2 1.4 11 248-258 5-15 (40)
190 COG1326 Uncharacterized archae 21.2 5E+02 0.011 24.3 7.7 75 295-379 64-142 (201)
191 PF12791 RsgI_N: Anti-sigma fa 21.1 2.1E+02 0.0045 20.5 4.4 34 361-394 5-39 (56)
No 1
>COG0484 DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=2.5e-90 Score=685.29 Aligned_cols=337 Identities=45% Similarity=0.813 Sum_probs=302.9
Q ss_pred CCCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHhhhhhhhhhhhcccccCCCCCcccc
Q 012891 79 SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYS 158 (454)
Q Consensus 79 ~~~~~~Y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yd~~~~~g~~~~~~~ 158 (454)
++.+|||+||||+++||.+|||+|||+||++||||+|+.+++|+++|++|+|||||||||+||++||+||..+..+.
T Consensus 1 ~~~~dyYeiLGV~k~As~~EIKkAYRkLA~kyHPD~n~g~~~AeeKFKEI~eAYEVLsD~eKRa~YD~fG~~~~~~g--- 77 (371)
T COG0484 1 MAKRDYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNPGDKEAEEKFKEINEAYEVLSDPEKRAAYDQFGHAGFKAG--- 77 (371)
T ss_pred CCccchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHhCCHHHHHHhhccCccccccC---
Confidence 35689999999999999999999999999999999999889999999999999999999999999999987765411
Q ss_pred CCCCCCccccCCCCcccccccccccCcccchhccccccc--------cccCCCCcEEEEEEEeeccccCcceeeeeceee
Q 012891 159 AGDAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFEDE--------TSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFV 230 (454)
Q Consensus 159 ~~~~~~~~~~~~~~~f~~~~~~~f~~~f~~~F~~~f~~~--------~~~~g~di~~~l~itlee~~~G~~k~v~~~~~~ 230 (454)
+++++ .|. .|+.+|.+||+++|++. .+.++.|+.+.|+|||+|||.|+++++.+++.+
T Consensus 78 --g~gg~-------g~~-----~fgg~~~DIF~~~FgGg~~~~~~~~~~~rG~Dl~~~l~isleEa~~G~~~~i~~~~~~ 143 (371)
T COG0484 78 --GFGGF-------GFG-----GFGGDFGDIFEDFFGGGGGGRRRPNRPRRGADLRYNLEITLEEAVFGVKKEIRVTRSV 143 (371)
T ss_pred --CcCCC-------CcC-----CCCCCHHHHHHHhhcCCCcccCCCCCcccCCceEEEEEeEhhhhccCceeeEecceee
Confidence 11111 111 11124556666666321 245789999999999999999999999999999
Q ss_pred cccCCCCCCccCCCccccCCCccccceEEeC------CccccCCCCCCceEEeeeecccccCCceeeceEEEEEEecCcc
Q 012891 231 PCDSCHGRGFPADAKTKICSTCRGIGRVTIP------PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGV 304 (454)
Q Consensus 231 ~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~------~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~~~V~Ip~G~ 304 (454)
.|+.|+|+|+..+..+.+|++|+|+|.+... .++++|+.|+|+|.+++++|.+|+|.|++...++++|.||+|+
T Consensus 144 ~C~~C~GsGak~gt~~~tC~tC~G~G~v~~~~~~g~~~~~~~C~~C~G~G~~i~~pC~~C~G~G~v~~~~~i~V~IPaGv 223 (371)
T COG0484 144 TCSTCHGSGAKPGTDPKTCPTCNGSGQVRTVQRTGFFSFQQTCPTCNGTGKIIKDPCGKCKGKGRVKKKKSISVNIPAGV 223 (371)
T ss_pred ECCcCCCCCCCCCCCCCcCCCCCCcCeEEEEEeeeEEEEEEECCCCccceeECCCCCCCCCCCCeEeeeeEEEEECCCCC
Confidence 9999999999999999999999999987543 2488999999999999999999999999999999999999999
Q ss_pred CCCCEEEECCCcCCCCCCCCCccEEEEEEEecCCcccccCCCeEEEEeeCHHHHhCCCEEEEeCCCCEEEEEeCCCCCCC
Q 012891 305 DSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGKVQVKIPKGVQPG 384 (454)
Q Consensus 305 ~~G~~i~~~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~Isl~eAllG~~~~i~tldG~~~v~ip~~~~~g 384 (454)
.+|++|++.|+|+++..|+++|||||.|.|++|+.|.|+|+|||++++|++.+|+||++++||||||.++|+||+++++|
T Consensus 224 ~~g~~ir~~g~G~~g~~Ggp~GDLyv~i~v~~h~~F~R~g~dL~~~~~Is~~~AalG~~i~vptl~g~~~l~ip~Gtq~G 303 (371)
T COG0484 224 DDGDRIRLSGEGEAGPNGGPAGDLYVFVHVKPHPIFERDGDDLYCEVPISFTEAALGGEIEVPTLDGRVKLKIPAGTQTG 303 (371)
T ss_pred ccCCEEEEecCcccCCCCCCCccEEEEEEeecCCCeEECCCceEeccccCHHHHhcCCEEEEEecCCCEEEecCCCCccC
Confidence 99999999999999988999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEEEcCCCcCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHHHHHh
Q 012891 385 QLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPTALNERQRAILEEFAEEE 433 (454)
Q Consensus 385 ~~~~l~g~Gmp~~~~~~~rGdL~v~~~V~~P~~ls~~q~~~l~~~~~~~ 433 (454)
++++|+|+|||.... ..+|||||+++|++|++||++|+++|++|+...
T Consensus 304 ~~~rl~gkG~p~~~~-~~~GDl~v~v~v~~P~~ls~~q~~lL~~~~~~~ 351 (371)
T COG0484 304 EVFRLRGKGMPKLRS-GGRGDLYVRVKVETPKNLSDEQKELLEEFAKSL 351 (371)
T ss_pred cEEEEcCCCccccCC-CCcCCEEEEEEEEcCCCCCHHHHHHHHHHHHhh
Confidence 999999999997633 236999999999999999999999999999865
No 2
>PRK14296 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=2.9e-81 Score=637.06 Aligned_cols=342 Identities=32% Similarity=0.641 Sum_probs=296.5
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHhhhhhhhhhhhcccccCCCCCccccCC
Q 012891 81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAG 160 (454)
Q Consensus 81 ~~~~Y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yd~~~~~g~~~~~~~~~ 160 (454)
..|||+||||+++||.+|||+|||+||++||||+|+ +++|+++|++|++||+||+||.||+.||++|..+..... +
T Consensus 3 ~~dyY~~Lgv~~~a~~~eik~ayrkla~~~HPD~n~-~~~a~~~F~~i~~AyevLsD~~KR~~YD~~G~~~~~~~~---~ 78 (372)
T PRK14296 3 KKDYYEVLGVSKTASEQEIRQAYRKLAKQYHPDLNK-SPDAHDKMVEINEAADVLLDKDKRKQYDQFGHAAFDGSS---G 78 (372)
T ss_pred CCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCC-CchHHHHHHHHHHHHHHhcCHHHhhhhhhccchhhcCCC---C
Confidence 479999999999999999999999999999999997 478999999999999999999999999999875432110 0
Q ss_pred CCCCccccCCCCcccccccc----cccCcccchhccccccc-----cccCCCCcEEEEEEEeeccccCcceeeeeceeec
Q 012891 161 DAEGFRYAGDAEGFRYAYQT----HFSDSFHKIFSEIFEDE-----TSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVP 231 (454)
Q Consensus 161 ~~~~~~~~~~~~~f~~~~~~----~f~~~f~~~F~~~f~~~-----~~~~g~di~~~l~itlee~~~G~~k~v~~~~~~~ 231 (454)
...+| .+|..+|.. .| .+|.++|+.+|++. .+.+++|+++.|.|||+|+|+|+++++.+.+.+.
T Consensus 79 ~~~~~------~~~~~~~~~~~~~g~-~~f~d~f~~~fggg~~~~~~~~~g~di~~~l~ltlee~~~G~~~~i~~~~~~~ 151 (372)
T PRK14296 79 FSSNF------GDFEDLFSNMGSSGF-SSFTNIFSDFFGSNKSDYQRSTKGQSVSLDIYLTFKELLFGVDKIIELDLLTN 151 (372)
T ss_pred cCcCC------Ccccccccccccccc-ccchhhhhhhcCCCccCCCCcCCCCCeEEEeeccHHHhhCCeeEEEEEeeeec
Confidence 00011 112211111 11 23556777777632 2346889999999999999999999999999999
Q ss_pred ccCCCCCCccCCCccccCCCccccceEEeC--------CccccCCCCCCceEEeeeecccccCCceeeceEEEEEEecCc
Q 012891 232 CDSCHGRGFPADAKTKICSTCRGIGRVTIP--------PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAG 303 (454)
Q Consensus 232 C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~--------~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~~~V~Ip~G 303 (454)
|+.|+|+|...+....+|+.|+|+|.++.. +.+.+|+.|+|+|++++.+|..|.|.|++.+.++++|.||||
T Consensus 152 C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~g~~~~q~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~~~V~Ip~G 231 (372)
T PRK14296 152 CSKCFGSGAESNSDIHICNNCHGTGEVLVQKNMGFFQFQQSAKCNVCNGAGKIIKNKCKNCKGKGKYLERKKIEVNIPKG 231 (372)
T ss_pred cCCCCCCccCCCCCCccCCCCCCCceEEEEEeccceEEEEEecCCCcCCcceeecccccCCCCceEEEEEEEEEEEECCC
Confidence 999999999988888999999999987532 135689999999999999999999999999999999999999
Q ss_pred cCCCCEEEECCCcCCCCCCCCCccEEEEEEEecCCccccc-CCCeEEEEeeCHHHHhCCCEEEEeCCCCEEEEEeCCCCC
Q 012891 304 VDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRD-GADVYVDSNISFTQAILGGKVDVPTLSGKVQVKIPKGVQ 382 (454)
Q Consensus 304 ~~~G~~i~~~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~-G~DL~~~~~Isl~eAllG~~~~i~tldG~~~v~ip~~~~ 382 (454)
+++|++|+|+|+|++...++.+|||+|+|+++||+.|+|+ |+||+++++|+|.|||+|+++.|+||||+++|+||++++
T Consensus 232 ~~~G~~i~~~g~G~~~~~~~~~GDL~v~v~v~~h~~F~R~~G~DL~~~~~Isl~eAllG~~~~i~tldG~~~v~ip~~t~ 311 (372)
T PRK14296 232 IRPNQQIKLSQKGHASLNNGVNGDLIIDIYLKESKVFEIINNNDILMTYNISYLDAILGNEIIIKTLDGDIKYKLPKSIN 311 (372)
T ss_pred CCCCCEEEEeccccCCCCCCCCccEEEEEEEeCCCCEEEeCCCcEEEEEecCHHHHhCCCEEEeeCCCCCEEEEECCccC
Confidence 9999999999999987667789999999999999999995 899999999999999999999999999999999999999
Q ss_pred CCcEEEEcCCCcCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHHHHHh
Q 012891 383 PGQLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPTALNERQRAILEEFAEEE 433 (454)
Q Consensus 383 ~g~~~~l~g~Gmp~~~~~~~rGdL~v~~~V~~P~~ls~~q~~~l~~~~~~~ 433 (454)
+|++++|+|+|||.......+|||||+|+|+||+.||++|+++|++|+..+
T Consensus 312 ~g~~~ri~GkGmP~~~~~~~~GDL~V~~~V~~P~~Ls~~q~~~l~~l~~~~ 362 (372)
T PRK14296 312 SNELIIINNKGLYKSINKDKRGDLIIKVNIVVPKNLSKKEKELIEQIYEQT 362 (372)
T ss_pred CCcEEEEcCCCCCcCCCCCCcCCEEEEEEEECCCCCCHHHHHHHHHHHhhc
Confidence 999999999999965333457999999999999999999999999998753
No 3
>PRK14288 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=3.6e-80 Score=628.93 Aligned_cols=332 Identities=32% Similarity=0.635 Sum_probs=290.7
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHhhhhhhhhhhhcccccCCCCCccccCC
Q 012891 81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAG 160 (454)
Q Consensus 81 ~~~~Y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yd~~~~~g~~~~~~~~~ 160 (454)
..|||+||||+++||.+|||+|||+||++||||+|+.+++|+++|++|++||+||+||.+|++||+||..+.... .+
T Consensus 2 ~~dyY~vLgv~~~As~~eIkkayrkla~k~HPD~~~~~~~a~~~f~~i~~AYevLsd~~kR~~YD~~G~~~~~~~---~~ 78 (369)
T PRK14288 2 ELSYYEILEVEKHSNQETIKKSYRKLALKYHPDRNAGDKEAEEKFKLINEAYGVLSDEKKRALYDRYGKKGLNQA---GA 78 (369)
T ss_pred CCChHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCccHHHHHHHHHHHHHHHhccHHHHHHHHHhcccccccC---CC
Confidence 469999999999999999999999999999999998778899999999999999999999999999986543210 00
Q ss_pred CCCCccccCCCCcccccccccccCcccchhcccccc-------ccccCCCCcEEEEEEEeeccccCcceeeeeceeeccc
Q 012891 161 DAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFED-------ETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCD 233 (454)
Q Consensus 161 ~~~~~~~~~~~~~f~~~~~~~f~~~f~~~F~~~f~~-------~~~~~g~di~~~l~itlee~~~G~~k~v~~~~~~~C~ 233 (454)
+ ...|.++|+ .|.++|+++|++ ..+.+++|+++.|.|||+|+|+|+++++.+.+.+.|+
T Consensus 79 ~---------~~~~~~~f~-----~~~~~F~~~fg~g~~~~~~~~~~~g~di~~~l~vslee~~~G~~~~i~~~r~~~C~ 144 (369)
T PRK14288 79 S---------QSDFSDFFE-----DLGSFFEDAFGFGARGSKRQKSSIAPDYLQTIELSFKEAVFGCKKTIKVQYQSVCE 144 (369)
T ss_pred C---------ccccccchh-----hHHHHHHhhcCCCCcccCcCCCCCCCCeeEeccccHHHHhCCeEEEEEEEeeccCC
Confidence 0 011222221 233444444431 1134688999999999999999999999999999999
Q ss_pred CCCCCCccCCCccccCCCccccceEEeC----CccccCCCCCCceEEeeeecccccCCceeeceEEEEEEecCccCCCCE
Q 012891 234 SCHGRGFPADAKTKICSTCRGIGRVTIP----PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVDSGDT 309 (454)
Q Consensus 234 ~C~G~G~~~~~~~~~C~~C~G~G~~~~~----~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~~~V~Ip~G~~~G~~ 309 (454)
.|+|+|.... ...+|+.|+|+|.+... .+..+|+.|.|+|+++..+|..|.|.|++.+.++++|.||||+++|++
T Consensus 145 ~C~G~G~~~~-~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~IP~G~~~G~~ 223 (369)
T PRK14288 145 SCDGTGAKDK-ALETCKQCNGQGQVFMRQGFMSFAQTCGACQGKGKIIKTPCQACKGKTYILKDEEIDAIIPEGIDDQNR 223 (369)
T ss_pred CCCCcccCCC-CCcCCCCCCCCcEEEEEeceEEEEEecCCCCCCceEccccCccCCCcceEEEEEEEEEecCCCCCCCCE
Confidence 9999999875 57899999999987543 246799999999999999999999999999999999999999999999
Q ss_pred EEECCCcCCCCCCCCCccEEEEEEEecCCcccccCCCeEEEEeeCHHHHhCCCEEEEeCCCCE-EEEEeCCCCCCCcEEE
Q 012891 310 IRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGK-VQVKIPKGVQPGQLLV 388 (454)
Q Consensus 310 i~~~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~Isl~eAllG~~~~i~tldG~-~~v~ip~~~~~g~~~~ 388 (454)
|+|+|+|++.+ ++.+|||+|+|+|++|+.|+|+|+||+++++|+|.|||+|+++.|+||||+ ++|+||+++++|++++
T Consensus 224 i~l~g~G~~~~-~~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~Isl~eAllG~~i~v~tLdG~~l~i~i~~~~~~g~~~~ 302 (369)
T PRK14288 224 MVLKNKGNEYE-KGKRGDLYLEARVKEDEHFKREGCDLFIEAPVFFTTIALGHTIKVPSLKGDELELKIPRNARDRQTFA 302 (369)
T ss_pred EEEccCccCCC-CCCCCCEEEEEEEEECCCcEEeCCEEEEEEecCHHHHhcCCEEEeecCCCCEEEEEeCCCCCCCcEEE
Confidence 99999999864 578999999999999999999999999999999999999999999999997 7999999999999999
Q ss_pred EcCCCcCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHHHHH
Q 012891 389 LRGKGLAKNGLFLDHGDQYVRFRVNFPTALNERQRAILEEFAEE 432 (454)
Q Consensus 389 l~g~Gmp~~~~~~~rGdL~v~~~V~~P~~ls~~q~~~l~~~~~~ 432 (454)
|+|+|||..+. ..+|||||+|+|+||++|+++|+++|++|+..
T Consensus 303 i~g~G~p~~~~-~~~GDL~v~~~v~~P~~ls~~q~~~l~~~~~~ 345 (369)
T PRK14288 303 FRNEGVKHPES-SYRGSLIVELQVIYPKSLNKEQQELLEKLHAS 345 (369)
T ss_pred EcCCCCCCCCC-CCCCCEEEEEEEECCCCCCHHHHHHHHHHHhh
Confidence 99999997642 24799999999999999999999999999975
No 4
>PRK14279 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=1.9e-79 Score=627.78 Aligned_cols=352 Identities=36% Similarity=0.680 Sum_probs=301.5
Q ss_pred CCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHhhhhhhhhhhhcccccCCCCCc-cc-
Q 012891 80 SKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENE-KY- 157 (454)
Q Consensus 80 ~~~~~Y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yd~~~~~g~~~~-~~- 157 (454)
+.+|||+||||+++||.+|||+|||+||++||||+++++++|+++|++|++||+||+||.||++||+||..+.... ..
T Consensus 7 ~~~Dyy~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vLsD~~KR~~YD~~G~~~~~~g~~~~ 86 (392)
T PRK14279 7 VEKDFYKELGVSSDASAEEIKKAYRKLARELHPDANPGDPAAEERFKAVSEAHDVLSDPAKRKEYDETRRLFAGGGFGGR 86 (392)
T ss_pred cccCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHhcchhhhhHHHHhhhhccccccccc
Confidence 3579999999999999999999999999999999998888899999999999999999999999999975422110 00
Q ss_pred ---cCCCCCCccccC--CCCcccccccccc---cCcccchhccccccc-------cccCCCCcEEEEEEEeeccccCcce
Q 012891 158 ---SAGDAEGFRYAG--DAEGFRYAYQTHF---SDSFHKIFSEIFEDE-------TSHFAPDIQVELVLSFAEAAKGCTK 222 (454)
Q Consensus 158 ---~~~~~~~~~~~~--~~~~f~~~~~~~f---~~~f~~~F~~~f~~~-------~~~~g~di~~~l~itlee~~~G~~k 222 (454)
+.+++.+|.+.. ....|.++|+..+ ..+|.++|+.+|+++ .+.+++|+++.|.|||+|+|+|+++
T Consensus 87 ~~~~~~~~~g~~~~~~~~~~d~~~~f~~~~~~~~~~f~d~f~~~fg~~~~~~~~~~~~~g~di~~~l~ltLee~~~G~~~ 166 (392)
T PRK14279 87 RFDGGGGFGGFGTGGDGAEFNLNDLFDAAGRGGGGGIGDLFGGLFNRGGGSARPSRPRRGNDLETETTLDFVEAAKGVTM 166 (392)
T ss_pred cccCCCCCCCccccccccCcChhhhhcccccccccchhhhhhhhhcCCCcccccCCCCCCCCeEEEEEEEHHHHhCCeEE
Confidence 001111221100 0122334443211 123567777777531 1346889999999999999999999
Q ss_pred eeeeceeecccCCCCCCccCCCccccCCCccccceEEeC----CccccCCCCCCceEEeeeecccccCCceeeceEEEEE
Q 012891 223 HVSFDAFVPCDSCHGRGFPADAKTKICSTCRGIGRVTIP----PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKV 298 (454)
Q Consensus 223 ~v~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~----~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~~~V 298 (454)
++.+.+.+.|+.|+|+|........+|+.|+|+|.++.. .++.+|+.|+|+|++++.+|..|.|.|++.+.++++|
T Consensus 167 ~v~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~i~~~C~~C~G~g~v~~~~~~~V 246 (392)
T PRK14279 167 PLRLTSPAPCTTCHGSGARPGTSPKVCPTCNGSGVISRNQGAFGFSEPCTDCRGTGSIIEDPCEECKGTGVTTRTRTINV 246 (392)
T ss_pred EEeeeccccCCCCccccccCCCCCCCCCCCcceEEEEEEecceEEEEecCCCCceeEEeCCcCCCCCCCeEEEEeeeeEE
Confidence 999999999999999999988888999999999987643 2478999999999999999999999999999999999
Q ss_pred EecCccCCCCEEEECCCcCCCCCCCCCccEEEEEEEecCCcccccCCCeEEEEeeCHHHHhCCCEEEEeCCCCEEEEEeC
Q 012891 299 TIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGKVQVKIP 378 (454)
Q Consensus 299 ~Ip~G~~~G~~i~~~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~Isl~eAllG~~~~i~tldG~~~v~ip 378 (454)
.||||+++|++|+|+|+|++.+.+..+|||||+|+|+||+.|+|+|+||+++++|+|.+|++|++++|+||||+++|+||
T Consensus 247 ~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~i~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~v~~ldg~i~v~Ip 326 (392)
T PRK14279 247 RIPPGVEDGQRIRLAGQGEAGLRGAPSGDLYVTVHVRPDKVFGRDGDDLTVTVPVSFTELALGSTLSVPTLDGPVGVKVP 326 (392)
T ss_pred EeCCCCCCCcEEEEeCCccCCCCCCCCCCEEEEEEEecCCcceeecCcEEEEEEccHHHHcCCceEEEEcCCceEEEEEC
Confidence 99999999999999999999877778899999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCcEEEEcCCCcCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHHHHHh
Q 012891 379 KGVQPGQLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPTALNERQRAILEEFAEEE 433 (454)
Q Consensus 379 ~~~~~g~~~~l~g~Gmp~~~~~~~rGdL~v~~~V~~P~~ls~~q~~~l~~~~~~~ 433 (454)
+++++|++++|+|+|||..+ ..+|||||+|+|+||+.||++|+++|++|+..+
T Consensus 327 ~g~~~g~~iri~g~G~p~~~--~~~GDL~I~~~v~~P~~Ls~~q~~~l~~~~~~~ 379 (392)
T PRK14279 327 AGTADGRILRVRGRGVPKRS--GGAGDLLVTVKVAVPPNLDGAAAEALEAYAEAE 379 (392)
T ss_pred CCCCCCCEEEECCCCCCCCC--CCCCCEEEEEEEECCCCCCHHHHHHHHHHHhhc
Confidence 99999999999999999653 347999999999999999999999999999864
No 5
>PRK14286 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=1.1e-78 Score=618.73 Aligned_cols=341 Identities=34% Similarity=0.694 Sum_probs=296.8
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHhhhhhhhhhhhcccccCCCCCccccCC
Q 012891 81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAG 160 (454)
Q Consensus 81 ~~~~Y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yd~~~~~g~~~~~~~~~ 160 (454)
..|||+||||+++||.+|||+|||+||++||||+|+++++|+++|++|++||+||+||.+|++||+||..+..... +..
T Consensus 3 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~g~~~~~-~~~ 81 (372)
T PRK14286 3 ERSYYDILGVSKSANDEEIKSAYRKLAIKYHPDKNKGNKESEEKFKEATEAYEILRDPKKRQAYDQFGKAGVNAGA-GGF 81 (372)
T ss_pred CCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchHHHHHHHHHHHHHHHhccHHHHHHHHHhCchhhcccc-CCC
Confidence 4799999999999999999999999999999999987788999999999999999999999999999876543110 000
Q ss_pred CCCCccccCCCCcccccccccccCcccchhccccccc-----------cccCCCCcEEEEEEEeeccccCcceeeeecee
Q 012891 161 DAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFEDE-----------TSHFAPDIQVELVLSFAEAAKGCTKHVSFDAF 229 (454)
Q Consensus 161 ~~~~~~~~~~~~~f~~~~~~~f~~~f~~~F~~~f~~~-----------~~~~g~di~~~l~itlee~~~G~~k~v~~~~~ 229 (454)
+..++ ..|..+| ++|.++|+.+|++. .+.+++|+++.|.|||+|+|+|+++++.+.+.
T Consensus 82 ~~~~~------~~~~~~~-----~~~~d~f~~ffgg~~~~~~~~~~~~~~~~g~di~~~l~vtLee~~~G~~k~i~~~r~ 150 (372)
T PRK14286 82 GQGAY------TDFSDIF-----GDFGDIFGDFFGGGRGGGSGGGRRSGPQRGSDLRYNLEVSLEDAALGREYKIEIPRL 150 (372)
T ss_pred CCCCc------ccccccc-----cchhhHHHHhhCCCccCCCcccccCCCCCCCCeeEEEEEEHHHHhCCeeEEEEeecc
Confidence 00000 0111111 13445666666421 13468899999999999999999999999999
Q ss_pred ecccCCCCCCccCCCccccCCCccccceEEeC----CccccCCCCCCceEEeeeecccccCCceeeceEEEEEEecCccC
Q 012891 230 VPCDSCHGRGFPADAKTKICSTCRGIGRVTIP----PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVD 305 (454)
Q Consensus 230 ~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~----~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~~~V~Ip~G~~ 305 (454)
+.|++|+|+|........+|+.|+|+|.+... .+..+|+.|+|+|++++++|..|+|.|++.+.++++|.||||++
T Consensus 151 ~~C~~C~G~G~~~~~~~~~C~~C~G~G~v~~~~G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~~~~~~~l~V~Ip~G~~ 230 (372)
T PRK14286 151 ESCVDCNGSGASKGSSPTTCPDCGGSGQIRRTQGFFSVATTCPTCRGKGTVISNPCKTCGGQGLQEKRRTINIKIPPGVE 230 (372)
T ss_pred ccCCCCcCCCcCCCCCCccCCCCcCeEEEEEEeceEEEEEeCCCCCceeeEecccCCCCCCCcEEecceEEEEEECCCCC
Confidence 99999999999988888999999999987543 24779999999999999999999999999999999999999999
Q ss_pred CCCEEEECCCcCCCCCCCCCccEEEEEEEecCCcccccCCCeEEEEeeCHHHHhCCCEEEEeCCCCE-EEEEeCCCCCCC
Q 012891 306 SGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGK-VQVKIPKGVQPG 384 (454)
Q Consensus 306 ~G~~i~~~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~Isl~eAllG~~~~i~tldG~-~~v~ip~~~~~g 384 (454)
+|++|+|+|+|++...+..+|||||+|+|+||+.|+|+|+||+++++|+|.+||+|+++.|+||||+ ++|+||+++++|
T Consensus 231 ~G~~i~~~g~G~~~~~~~~~GDL~i~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tldG~~i~v~ip~g~~~g 310 (372)
T PRK14286 231 TGSRLKVSGEGEAGPNGGPHGDLYVVTHIKKHELFERQGNDLILVRKISLAQAILGAEIEVPTIDGKKAKMKIPEGTESG 310 (372)
T ss_pred CCCEEEECCccccCCCCCCCceEEEEEEEccCCCEEEecCCEEEEEEECHHHHhCCCEEEEeCCCCCEEEEEeCCccCCC
Confidence 9999999999999876677899999999999999999999999999999999999999999999997 899999999999
Q ss_pred cEEEEcCCCcCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHHHHHhc
Q 012891 385 QLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPTALNERQRAILEEFAEEEI 434 (454)
Q Consensus 385 ~~~~l~g~Gmp~~~~~~~rGdL~v~~~V~~P~~ls~~q~~~l~~~~~~~~ 434 (454)
++++|+|+|||..+. ..+|||||+|+|.||+.||++|+++|++|+..+.
T Consensus 311 ~~~ri~G~G~P~~~~-~~~GDL~V~~~V~~P~~Ls~~qk~~l~~l~~~~~ 359 (372)
T PRK14286 311 QVFRLKGHGMPYLGA-YGKGDQHVIVKIEIPKKITRRQRELIEEFARESG 359 (372)
T ss_pred cEEEECCCCCCCCCC-CCCCcEEEEEEEECCCCCCHHHHHHHHHHHHhcC
Confidence 999999999997643 2479999999999999999999999999998753
No 6
>PRK14284 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=5.9e-78 Score=617.46 Aligned_cols=366 Identities=35% Similarity=0.652 Sum_probs=303.0
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHhhhhhhhhhhhcccccCCCCCccccCCC
Q 012891 82 RDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAGD 161 (454)
Q Consensus 82 ~~~Y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yd~~~~~g~~~~~~~~~~ 161 (454)
.|||+||||+++||.+|||+|||+||++||||+|++++.|+++|++|++||+||+||.+|+.||++|..+......+. .
T Consensus 1 ~d~y~iLgv~~~a~~~eikkayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~g~~~g~~~~-~ 79 (391)
T PRK14284 1 MDYYTILGVSKTASPEEIKKAYRKLAVKYHPDKNPGDAEAEKRFKEVSEAYEVLSDAQKRESYDRYGKDGPFAGAGGF-G 79 (391)
T ss_pred CCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchHHHHHHHHHHHHHHHhcCHHHHHHHHhccccccccccCCc-C
Confidence 489999999999999999999999999999999998888999999999999999999999999999876532110000 0
Q ss_pred CCCccc-cCCCCcccccccccccCcccchhcccccc-----------ccccCCCCcEEEEEEEeeccccCcceeeeecee
Q 012891 162 AEGFRY-AGDAEGFRYAYQTHFSDSFHKIFSEIFED-----------ETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAF 229 (454)
Q Consensus 162 ~~~~~~-~~~~~~f~~~~~~~f~~~f~~~F~~~f~~-----------~~~~~g~di~~~l~itlee~~~G~~k~v~~~~~ 229 (454)
..+|.. ......|..+|+..|+ .+.++|+.+|++ ..+.++.|+++.|.|||+|+|+|+++++.+.+.
T Consensus 80 ~~g~~~~~~~~~~~~~~f~~~~~-~~~d~f~~~fgg~g~~~~~~~~~~~~~~g~d~~~~l~vslee~~~G~~~~i~~~r~ 158 (391)
T PRK14284 80 GAGMGNMEDALRTFMGAFGGEFG-GGGSFFEGLFGGLGEAFGMRGGPAGARQGASKKVHITLSFEEAAKGVEKELLVSGY 158 (391)
T ss_pred CCCcCcccchhhhcccccccccc-ccccchhhhccCccccccccccCCCcCCCCCeEEEEEEEHHHHhCCeeEEEEEeee
Confidence 011110 0011112222221111 123556655542 112467899999999999999999999999999
Q ss_pred ecccCCCCCCccCCCccccCCCccccceEEeC----CccccCCCCCCceEEeeeecccccCCceeeceEEEEEEecCccC
Q 012891 230 VPCDSCHGRGFPADAKTKICSTCRGIGRVTIP----PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVD 305 (454)
Q Consensus 230 ~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~----~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~~~V~Ip~G~~ 305 (454)
+.|+.|+|+|........+|+.|+|+|.+... .++.+|+.|+|+|++++++|..|.|.|++.+.++++|.||||++
T Consensus 159 ~~C~~C~G~G~~~~~~~~~C~~C~G~G~v~~~~G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~ 238 (391)
T PRK14284 159 KSCDACSGSGANSSQGIKVCDRCKGSGQVVQSRGFFSMASTCPECGGEGRVITDPCSVCRGQGRIKDKRSVHVHIPAGVD 238 (391)
T ss_pred ccCCCCcccccCCCCCCeecCccCCeeEEEEEeceEEEEEECCCCCCCCcccCCcCCCCCCcceecceEEEEEEECCCCC
Confidence 99999999999988888999999999987543 24679999999999999999999999999999999999999999
Q ss_pred CCCEEEECCCcCCCCCCCCCccEEEEEEEecCCcccccCCCeEEEEeeCHHHHhCCCEEEEeCCC--CEEEEEeCCCCCC
Q 012891 306 SGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLS--GKVQVKIPKGVQP 383 (454)
Q Consensus 306 ~G~~i~~~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~Isl~eAllG~~~~i~tld--G~~~v~ip~~~~~ 383 (454)
+|++|+|+|+|++++.++.+|||||+|+++||+.|+|+|+||+++++|+|.+|++|++++|+||| +.++|+||+++++
T Consensus 239 ~G~~i~~~g~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~v~tld~g~~i~v~Ip~g~~~ 318 (391)
T PRK14284 239 SGMRLKMEGYGDAGQNGAPAGDLYVFIDVEPHPVFERRGDDLILELPIGFVDAALGMKKEIPTLLKEGTCRLTIPEGIQS 318 (391)
T ss_pred CCCEEEEeccccCCCCCCCCCCEEEEEEEecCCCceeecCCEEEEEEecHHHHhCCCeEEEeecCCCcEEEEEECCccCC
Confidence 99999999999998878889999999999999999999999999999999999999999999999 5689999999999
Q ss_pred CcEEEEcCCCcCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHHHHHhccc---CCCCh-hh-hhhHHHh
Q 012891 384 GQLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPTALNERQRAILEEFAEEEINN---ENNTS-AE-ENWLYQQ 450 (454)
Q Consensus 384 g~~~~l~g~Gmp~~~~~~~rGdL~v~~~V~~P~~ls~~q~~~l~~~~~~~~~~---~~~~~-~~-~~~~~~~ 450 (454)
|++++|+|+|||..+. ..+|||||+|+|.+|+.|+++|+++|++|+..+..+ +...+ .+ .+||+.|
T Consensus 319 g~~~~i~g~G~p~~~~-~~~GDL~V~~~v~~P~~l~~~q~~ll~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (391)
T PRK14284 319 GTILKVRGQGFPNVHG-KGRGDLLVRISVETPQNLSEEQKELLRQFAATEKAENFPKKRSFLDKIKGFFSDF 389 (391)
T ss_pred CeEEEECCCCCCCCCC-CCCCcEEEEEEEECCCCCCHHHHHHHHHHHhhcccccCcccccHHHHHHHHHhhc
Confidence 9999999999997642 247999999999999999999999999998754211 11122 22 4588776
No 7
>PRK14277 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=1.2e-77 Score=614.13 Aligned_cols=347 Identities=41% Similarity=0.769 Sum_probs=293.6
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHhhhhhhhhhhhcccccCCCCCccccCC
Q 012891 81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAG 160 (454)
Q Consensus 81 ~~~~Y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yd~~~~~g~~~~~~~~~ 160 (454)
..|||+||||+++||.+|||+|||+||++||||+++++++|+++|++|++||+||+||.+|+.||++|..+......+.+
T Consensus 4 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kr~~yD~~G~~~~~~~~~~~~ 83 (386)
T PRK14277 4 KKDYYEILGVDRNATEEEIKKAYRRLAKKYHPDLNPGDKEAEQKFKEINEAYEILSDPQKRAQYDQFGHAAFDPGGFGQG 83 (386)
T ss_pred CCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCCCcCCCchHHHHHHHHHHHHHHHhCCHHHHHHHHhhccccccccccccC
Confidence 46999999999999999999999999999999999877889999999999999999999999999998765432111110
Q ss_pred CC--CCccccCCCCcccccccccccCcccchhccccccc------cccCCCCcEEEEEEEeeccccCcceeeeeceeecc
Q 012891 161 DA--EGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFEDE------TSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPC 232 (454)
Q Consensus 161 ~~--~~~~~~~~~~~f~~~~~~~f~~~f~~~F~~~f~~~------~~~~g~di~~~l~itlee~~~G~~k~v~~~~~~~C 232 (454)
+. .++. . ..|...+ ..|.+.|.++|+.+|++. .+.+++|+++.|.|||+|+|+|+++++.+.+.+.|
T Consensus 84 ~~~~~g~~--~--~~~~~~~-~~~~d~f~~~F~~~fgg~~~~~~~~~~kg~di~~~l~vtLee~~~G~~~~v~~~r~~~C 158 (386)
T PRK14277 84 GFGQGGFG--G--GGFDFDF-GGFGDIFEDIFGDFFGTGRRRAETGPQKGADIRYDLELTFEEAAFGTEKEIEVERFEKC 158 (386)
T ss_pred CcCCCCcc--c--cCccccc-cchhHHHHHhhcccccCCCcCCCCCCCCCCCEEEEEEEEHHHHhCCeEEEEEEEeeccC
Confidence 00 0110 0 0010000 011112233333333321 13468899999999999999999999999999999
Q ss_pred cCCCCCCccCCCccccCCCccccceEEeC--------CccccCCCCCCceEEeeeecccccCCceeeceEEEEEEecCcc
Q 012891 233 DSCHGRGFPADAKTKICSTCRGIGRVTIP--------PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGV 304 (454)
Q Consensus 233 ~~C~G~G~~~~~~~~~C~~C~G~G~~~~~--------~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~~~V~Ip~G~ 304 (454)
+.|+|+|........+|+.|+|.|.+... ....+|+.|+|+|.+++++|..|+|.|++.+.++++|.||||+
T Consensus 159 ~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~ 238 (386)
T PRK14277 159 DVCKGSGAKPGSKPVTCPVCHGTGQVRTRQNTPFGRIVNIRTCDRCHGEGKIITDPCNKCGGTGRIRRRRKIKVNIPAGI 238 (386)
T ss_pred CCCCCCCcCCCCCCccCCCCCCEEEEEEEEeccCceEEEEEECCCCCcceeeccCCCCCCCCCcEEeeeeEEEEecCCCc
Confidence 99999999988888999999999987532 1256899999999999999999999999999999999999999
Q ss_pred CCCCEEEECCCcCCCCCCCCCccEEEEEEEecCCcccccCCCeEEEEeeCHHHHhCCCEEEEeCCCCEEEEEeCCCCCCC
Q 012891 305 DSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGKVQVKIPKGVQPG 384 (454)
Q Consensus 305 ~~G~~i~~~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~Isl~eAllG~~~~i~tldG~~~v~ip~~~~~g 384 (454)
++|++|+|+|+|++...+..+|||||+|+|++|+.|+|+|+||+++++|+|.|||+|+++.|+||||+++|+||+++++|
T Consensus 239 ~~G~~i~~~g~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tldG~~~v~ip~g~~~g 318 (386)
T PRK14277 239 DDGQMITLRGEGEPGIKGGPNGDLYIVIKVKPHPLFKREGYNVYLEMPITFTDAALGGEIEIPTLDGKVKFTIPEGTQTG 318 (386)
T ss_pred cCCcEEEEccccccCCCCCCCccEEEEEEEecCCCeEEecCCEEEEEEcCHHHHhCCCEEEEEcCCCCEEEEECCCCCCC
Confidence 99999999999998766677899999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEEEcCCCcCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHHHHHh
Q 012891 385 QLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPTALNERQRAILEEFAEEE 433 (454)
Q Consensus 385 ~~~~l~g~Gmp~~~~~~~rGdL~v~~~V~~P~~ls~~q~~~l~~~~~~~ 433 (454)
++++|+|+|||..+.. .+|||||+|+|+||+.||++|+++|++|+..+
T Consensus 319 ~~~ri~g~G~p~~~~~-~~GDL~v~~~V~~P~~Ls~~qk~~l~~l~~~~ 366 (386)
T PRK14277 319 TKFRLRGKGIPHLRGR-GRGDQIVKVYIEVPKKLTEKQKELLREFEKLS 366 (386)
T ss_pred CEEEECCCCCCCCCCC-CCCCEEEEEEEEeCCCCCHHHHHHHHHHHhhc
Confidence 9999999999976432 47999999999999999999999999999754
No 8
>PRK14295 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=3e-77 Score=610.93 Aligned_cols=350 Identities=36% Similarity=0.701 Sum_probs=297.9
Q ss_pred CCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHhhhhhhhhhhhcc----cccCCCCCc
Q 012891 80 SKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDR----RRSRGSENE 155 (454)
Q Consensus 80 ~~~~~Y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yd~----~~~~g~~~~ 155 (454)
+..|||+||||+++||.+|||+|||+||++||||+++.+++|+++|++|++||+||+||.+|++||+ ||..+....
T Consensus 7 ~~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yD~~~~~~G~~g~~~~ 86 (389)
T PRK14295 7 IEKDYYKVLGVPKDATEAEIKKAYRKLAREYHPDANKGDAKAEERFKEISEAYDVLSDEKKRKEYDEARSLFGNGGFRPG 86 (389)
T ss_pred cccCHHHhcCCCCCCCHHHHHHHHHHHHHHHCCCcCCCchhHHHHHHHHHHHHHHHCchhhHHHHHHHHhhhcccccccC
Confidence 3579999999999999999999999999999999998777899999999999999999999999999 876554211
Q ss_pred cccCCCCCCccccCCCCccccccc----ccccCcccchhcccccc----ccccCCCCcEEEEEEEeeccccCcceeeeec
Q 012891 156 KYSAGDAEGFRYAGDAEGFRYAYQ----THFSDSFHKIFSEIFED----ETSHFAPDIQVELVLSFAEAAKGCTKHVSFD 227 (454)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~f~~~~~----~~f~~~f~~~F~~~f~~----~~~~~g~di~~~l~itlee~~~G~~k~v~~~ 227 (454)
. +.++..+|.+ +..+.|..+++ ..|++.|.++|+.+|++ ..+.+++|+++.|.|||+|+|+|+++++.+.
T Consensus 87 ~-~~~~~~~~~~-~~~~~f~~~~~~~~~~~~~~~f~d~f~~~fg~~~~~~~~~~g~di~~~l~lsLee~~~G~~k~i~~~ 164 (389)
T PRK14295 87 P-GGGGGGGFNF-DLGDLFGGGAQGGGGAGGGGGLGDVFGGLFNRGGRRTQPRRGADVESEVTLSFTEAIDGATVPLRLT 164 (389)
T ss_pred C-CCCCCCCCCc-ccccccccccccccccccccchhhhhcccccCCCCCCCCCCCCCEEEEEEEEHHHHhCCceEEEEee
Confidence 0 0000011110 00111211100 01222355667666653 1234688999999999999999999999999
Q ss_pred eeecccCCCCCCccCCCccccCCCccccceEEeC----CccccCCCCCCceEEeeeecccccCCceeeceEEEEEEecCc
Q 012891 228 AFVPCDSCHGRGFPADAKTKICSTCRGIGRVTIP----PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAG 303 (454)
Q Consensus 228 ~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~----~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~~~V~Ip~G 303 (454)
+.+.|++|.|+|...+....+|+.|+|+|.+... .++.+|+.|+|+|.+++.+|..|.|.|++.+.++++|.||||
T Consensus 165 r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~~~~~~~l~V~Ip~G 244 (389)
T PRK14295 165 SQAPCPACSGTGAKNGTTPRVCPTCSGTGQVSRNSGGFSLSEPCPDCKGRGLIADDPCLVCKGSGRAKSSRTMQVRIPAG 244 (389)
T ss_pred ccccCCCCcccccCCCCCCcCCCCCCCEeEEEEEecceEEEEecCCCcceeEEeccCCCCCCCCceEeeeeEEEEEeCCC
Confidence 9999999999999988888999999999987543 246799999999999999999999999999999999999999
Q ss_pred cCCCCEEEECCCcCCCCCCCCCccEEEEEEEecCCcccccCCCeEEEEeeCHHHHhCCCEEEEeCCCC-EEEEEeCCCCC
Q 012891 304 VDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSG-KVQVKIPKGVQ 382 (454)
Q Consensus 304 ~~~G~~i~~~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~Isl~eAllG~~~~i~tldG-~~~v~ip~~~~ 382 (454)
+++|++|+|+|+|++...+..+|||||+|+++||+.|+|+|+||+++++|+|.+||+|++++|+|||| .++|+||++++
T Consensus 245 ~~~G~~i~l~g~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~I~tldG~~~~v~ip~g~~ 324 (389)
T PRK14295 245 VSDGQRIRLRGKGAPGERGGPAGDLYVVVHVDPHPVFGRSGDNLTVTVPVTFPEAALGAEVRVPTLGGPPVTVKLPPGTP 324 (389)
T ss_pred CCCCCEEEEcccccCCCCCCCCccEEEEEEEecCCCEEEecCCEEEEEeecHHHHhCCCeEEEECCCCCEEEEEECCccC
Confidence 99999999999999877677899999999999999999999999999999999999999999999999 58999999999
Q ss_pred CCcEEEEcCCCcCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHHHHHh
Q 012891 383 PGQLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPTALNERQRAILEEFAEEE 433 (454)
Q Consensus 383 ~g~~~~l~g~Gmp~~~~~~~rGdL~v~~~V~~P~~ls~~q~~~l~~~~~~~ 433 (454)
+|++++|+|+|||..+ ..+|||||+|+|.||+.||++|+++|++|+...
T Consensus 325 ~g~~iri~G~G~p~~~--~~~GDL~i~~~v~~P~~Ls~~qk~~l~~l~~~~ 373 (389)
T PRK14295 325 NGRVLRVRGKGAVRKD--GTRGDLLVTVEVAVPKDLSGKAREALEAFREAT 373 (389)
T ss_pred CCcEEEECCCCcCCCC--CCCCCEEEEEEEECCCCCCHHHHHHHHHHHhhc
Confidence 9999999999999753 347999999999999999999999999999754
No 9
>PRK14298 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=1.6e-77 Score=610.68 Aligned_cols=335 Identities=41% Similarity=0.723 Sum_probs=293.8
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHhhhhhhhhhhhcccccCCCCCccccCC
Q 012891 81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAG 160 (454)
Q Consensus 81 ~~~~Y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yd~~~~~g~~~~~~~~~ 160 (454)
..|||+||||+++||.+|||+|||+||++||||+|+ +++|+++|++|++||+||+||.+|+.||++|..+.... + +
T Consensus 4 ~~d~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~-~~~~~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~g~~~~-~--~ 79 (377)
T PRK14298 4 TRDYYEILGLSKDASVEDIKKAYRKLAMKYHPDKNK-EPDAEEKFKEISEAYAVLSDAEKRAQYDRFGHAGIDNQ-Y--S 79 (377)
T ss_pred CCCHHHhhCCCCCCCHHHHHHHHHHHHHHhCccccC-ChhHHHHHHHHHHHHHHhcchHhhhhhhhcCccccccc-c--C
Confidence 469999999999999999999999999999999997 47789999999999999999999999999986553211 0 0
Q ss_pred CCCCccccCCCCcccccccccccCcccchhccccccc------cccCCCCcEEEEEEEeeccccCcceeeeeceeecccC
Q 012891 161 DAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFEDE------TSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDS 234 (454)
Q Consensus 161 ~~~~~~~~~~~~~f~~~~~~~f~~~f~~~F~~~f~~~------~~~~g~di~~~l~itlee~~~G~~k~v~~~~~~~C~~ 234 (454)
+..+|. . ..| ++|.++|+.+|++. .+.++.|+++.|.|||+|+|+|+++++.+.+.+.|+.
T Consensus 80 ~~~~~~--~--~~~---------~~~~d~f~~~Fgg~~~~~~~~~~~g~di~~~l~vslee~~~G~~~~i~~~r~~~C~~ 146 (377)
T PRK14298 80 AEDIFR--G--ADF---------GGFGDIFEMFFGGGGRRGRMGPRRGSDLRYDLYITLEEAAFGVRKDIDVPRAERCST 146 (377)
T ss_pred cccccc--c--CCc---------CcchhhhHhhhcCCCccCCCCCCCCCCEEEEEEEEHHHhhCCeEEEEEEEeeccCCC
Confidence 000010 0 001 12345566666521 2357889999999999999999999999999999999
Q ss_pred CCCCCccCCCccccCCCccccceEEeC--------CccccCCCCCCceEEeeeecccccCCceeeceEEEEEEecCccCC
Q 012891 235 CHGRGFPADAKTKICSTCRGIGRVTIP--------PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVDS 306 (454)
Q Consensus 235 C~G~G~~~~~~~~~C~~C~G~G~~~~~--------~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~~~V~Ip~G~~~ 306 (454)
|+|+|...+....+|+.|+|+|.++.. .++.+|+.|+|+|++++++|..|.|.|++.+.++++|.||||+++
T Consensus 147 C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~IppG~~~ 226 (377)
T PRK14298 147 CSGTGAKPGTSPKRCPTCGGTGQVTTTRSTPLGQFVTTTTCSTCHGRGQVIESPCPVCSGTGKVRKTRKITVNVPAGADS 226 (377)
T ss_pred CCCCcccCCCCCCcCCCCCCccEEEEEEecCceeEEEEEeCCCCCCCCcccCCCCCCCCCccEEEEEEEEEecCCCCCCC
Confidence 999999988888999999999987532 247799999999999999999999999999999999999999999
Q ss_pred CCEEEECCCcCCCCCCCCCccEEEEEEEecCCcccccCCCeEEEEeeCHHHHhCCCEEEEeCCCCEEEEEeCCCCCCCcE
Q 012891 307 GDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGKVQVKIPKGVQPGQL 386 (454)
Q Consensus 307 G~~i~~~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~Isl~eAllG~~~~i~tldG~~~v~ip~~~~~g~~ 386 (454)
|++|+|+|+|++...+..+|||||+|+++||+.|+|+|+||+++++|+|.|||+|+++.|+||||++.|+||+++++|++
T Consensus 227 G~~i~~~g~G~~~~~~~~~GDL~i~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tldG~i~v~ip~g~~~g~~ 306 (377)
T PRK14298 227 GLRLKLSGEGEAGSPGAPSGDLYIVLHVKEHDYFERVGDDIISEIPISFTQAALGADIMVPTLYGKVKMNIPPGTQTHSV 306 (377)
T ss_pred CCEEEEecccCCCCCCCCCcCEEEEEEEecCCCeEEEcCcEEEEEEeCHHHHhCCCeEEEecCCCCEEEEeCCCcccCCE
Confidence 99999999999977778899999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEcCCCcCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHHHHHh
Q 012891 387 LVLRGKGLAKNGLFLDHGDQYVRFRVNFPTALNERQRAILEEFAEEE 433 (454)
Q Consensus 387 ~~l~g~Gmp~~~~~~~rGdL~v~~~V~~P~~ls~~q~~~l~~~~~~~ 433 (454)
++|+|+|||..+. ..+|||||+|+|+||+.|+++|+++|++++..+
T Consensus 307 lri~g~G~p~~~~-~~~GDL~V~~~V~~P~~ls~~~~~ll~~l~~~~ 352 (377)
T PRK14298 307 FRLKDKGMPRLHG-HGKGDQLVKVIVKTPTKLTQEQKELLREFDELS 352 (377)
T ss_pred EEECCCCCCCCCC-CCCCCEEEEEEEECCCCCCHHHHHHHHHHHhhc
Confidence 9999999997642 247999999999999999999999999999753
No 10
>PRK14278 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=5.7e-77 Score=607.28 Aligned_cols=332 Identities=36% Similarity=0.658 Sum_probs=289.9
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHhhhhhhhhhhhcccccCCCCCccccCCC
Q 012891 82 RDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAGD 161 (454)
Q Consensus 82 ~~~Y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yd~~~~~g~~~~~~~~~~ 161 (454)
.|||+||||+++||.+|||+|||+||++||||+|+ +++|+++|++|++||+||+||.+|+.||++|..+... + +.
T Consensus 3 ~d~y~iLgv~~~a~~~eik~ayr~la~~~hpD~~~-~~~a~~~f~~i~~Ay~vL~d~~~r~~YD~~G~~~~~~---~-~~ 77 (378)
T PRK14278 3 RDYYGLLGVSRNASDAEIKRAYRKLARELHPDVNP-DEEAQEKFKEISVAYEVLSDPEKRRIVDLGGDPLESA---G-GG 77 (378)
T ss_pred CCcceecCCCCCCCHHHHHHHHHHHHHHHCCCCCC-cHHHHHHHHHHHHHHHHhchhhhhhhhhccCCccccc---c-CC
Confidence 69999999999999999999999999999999998 5789999999999999999999999999997542210 0 00
Q ss_pred CCCccccCCCCcccccccccccCcccchhccccccc--------cccCCCCcEEEEEEEeeccccCcceeeeeceeeccc
Q 012891 162 AEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFEDE--------TSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCD 233 (454)
Q Consensus 162 ~~~~~~~~~~~~f~~~~~~~f~~~f~~~F~~~f~~~--------~~~~g~di~~~l~itlee~~~G~~k~v~~~~~~~C~ 233 (454)
..+|. .+| ++|.++|+.+|++. ...+++|+++.|.|||+|+|+|+++++.+.+.+.|+
T Consensus 78 ~~g~~-----~~f---------~~~~d~f~~ffgg~g~~~~~~~~~~~g~d~~~~l~vtLee~~~G~~~~i~~~~~~~C~ 143 (378)
T PRK14278 78 GGGFG-----GGF---------GGLGDVFEAFFGGGAASRGPRGRVRPGSDSLLRMRLDLEECATGVTKQVTVDTAVLCD 143 (378)
T ss_pred CCCCC-----cCc---------CchhHHHHHHhCCCCCCCCCccCCCCCCCeEEEEEEEHHHhcCCeEEEEEEEeeccCC
Confidence 00110 011 12334555555421 124688999999999999999999999999999999
Q ss_pred CCCCCCccCCCccccCCCccccceEEeC--------CccccCCCCCCceEEeeeecccccCCceeeceEEEEEEecCccC
Q 012891 234 SCHGRGFPADAKTKICSTCRGIGRVTIP--------PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVD 305 (454)
Q Consensus 234 ~C~G~G~~~~~~~~~C~~C~G~G~~~~~--------~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~~~V~Ip~G~~ 305 (454)
.|+|+|...+....+|+.|+|+|.+... ....+|+.|+|+|++++++|..|.|.|++.+.++++|.||||++
T Consensus 144 ~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~~~V~Ip~G~~ 223 (378)
T PRK14278 144 RCHGKGTAGDSKPVTCDTCGGRGEVQTVQRSFLGQVMTSRPCPTCRGVGEVIPDPCHECAGDGRVRARREITVKIPAGVG 223 (378)
T ss_pred CCcCccCCCCCCceecCCccCceEEEEEEeccceeEEEEEECCCCCccceeeCCCCCCCCCceeEecceEEEEEECCCCC
Confidence 9999999988888999999999986532 12678999999999999999999999999999999999999999
Q ss_pred CCCEEEECCCcCCCCCCCCCccEEEEEEEecCCcccccCCCeEEEEeeCHHHHhCCCEEEEeCC-CCEEEEEeCCCCCCC
Q 012891 306 SGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTL-SGKVQVKIPKGVQPG 384 (454)
Q Consensus 306 ~G~~i~~~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~Isl~eAllG~~~~i~tl-dG~~~v~ip~~~~~g 384 (454)
+|++|+|+|+|++.+.+..+|||||+|+++||+.|+|+|+||+++++|+|.+|++|+++.|+|| ++.++|+||+++++|
T Consensus 224 ~G~~i~~~g~G~~~~~~~~~GDL~v~i~~~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tld~~~i~v~ip~g~~~g 303 (378)
T PRK14278 224 DGMRIRLAAQGEVGPGGGPAGDLYVEVHEQPHDVFVRDGDDLHCTVSVPMVDAALGTTVTVEAILDGPSEITIPPGTQPG 303 (378)
T ss_pred CCcEEEEccCcCCCCCCCCCCCEEEEEEECcCCCEEEcCCCEEEEEecCHHHHhcCCeEEEecCCCCeEEEEeCCCcCCC
Confidence 9999999999999876778899999999999999999999999999999999999999999999 556899999999999
Q ss_pred cEEEEcCCCcCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHHHHHh
Q 012891 385 QLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPTALNERQRAILEEFAEEE 433 (454)
Q Consensus 385 ~~~~l~g~Gmp~~~~~~~rGdL~v~~~V~~P~~ls~~q~~~l~~~~~~~ 433 (454)
++++|+|+|||..+. ..+|||||+|+|+||+.||++|+++|++|+..+
T Consensus 304 ~~lrl~g~G~p~~~~-~~~GDL~V~~~V~~P~~Ls~~qk~~l~~~~~~~ 351 (378)
T PRK14278 304 SVITLRGRGMPHLRS-GGRGDLHAHVEVVVPTRLDHEDIELLRELKALR 351 (378)
T ss_pred cEEEECCCCCCCCCC-CCCCCEEEEEEEEcCCCCCHHHHHHHHHHHhhc
Confidence 999999999997532 247999999999999999999999999999653
No 11
>PRK14276 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=3.8e-77 Score=609.40 Aligned_cols=339 Identities=40% Similarity=0.699 Sum_probs=294.6
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHhhhhhhhhhhhcccccCCCCCcccc-C
Q 012891 81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYS-A 159 (454)
Q Consensus 81 ~~~~Y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yd~~~~~g~~~~~~~-~ 159 (454)
..|||+||||+++||.+|||+|||+||++||||+|+ +++|+++|++|++||+||+||.+|++||+||+.+..+...+ .
T Consensus 3 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HpD~~~-~~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~~~~~~~~~~~ 81 (380)
T PRK14276 3 NTEYYDRLGVSKDASQDEIKKAYRKLSKKYHPDINK-EPGAEEKYKEVQEAYETLSDPQKRAAYDQYGAAGANGGFGGGA 81 (380)
T ss_pred CCCHHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCC-CcCHHHHHHHHHHHHHHhcCHhhhhhHhhcCCccccCCCCCCC
Confidence 469999999999999999999999999999999997 47789999999999999999999999999987654321000 0
Q ss_pred CCCCCccccCCCCcccccccccccCcccchhccccccc-------cccCCCCcEEEEEEEeeccccCcceeeeeceeecc
Q 012891 160 GDAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFEDE-------TSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPC 232 (454)
Q Consensus 160 ~~~~~~~~~~~~~~f~~~~~~~f~~~f~~~F~~~f~~~-------~~~~g~di~~~l~itlee~~~G~~k~v~~~~~~~C 232 (454)
.++.+ |.. ...| ++|.++|+.+|++. .+.+++|+.+.|.|||+|+|+|+++++.+.+.+.|
T Consensus 82 ~~~~~---------~~~--~~~~-~~~~d~f~~~fgg~~~~~~~~~~~~g~di~~~l~vtLee~~~G~~~~i~~~~~~~C 149 (380)
T PRK14276 82 GGFGG---------FDG--SGGF-GGFEDIFSSFFGGGGARRNPNAPRQGDDLQYRVNLDFEEAIFGKEKEVSYNREATC 149 (380)
T ss_pred CCCCC---------ccc--cccc-cchhhHHHHHhCccccccCcCCCCCCCCEEEEEEEEHHHhcCCeEEEEEeeccccC
Confidence 00011 100 0011 12456677776521 13468899999999999999999999999999999
Q ss_pred cCCCCCCccCCCccccCCCccccceEEeC--------CccccCCCCCCceEEeeeecccccCCceeeceEEEEEEecCcc
Q 012891 233 DSCHGRGFPADAKTKICSTCRGIGRVTIP--------PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGV 304 (454)
Q Consensus 233 ~~C~G~G~~~~~~~~~C~~C~G~G~~~~~--------~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~~~V~Ip~G~ 304 (454)
+.|+|+|...+....+|+.|+|+|.+... ..+.+|+.|+|+|++++.+|..|.|.|++.+.++++|.||||+
T Consensus 150 ~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~~~~~~~l~V~Ip~G~ 229 (380)
T PRK14276 150 HTCNGSGAKPGTSPVTCGKCHGSGVITVDTQTPLGMMRRQVTCDVCHGTGKEIKEPCQTCHGTGHEKQAHTVSVKIPAGV 229 (380)
T ss_pred CCCcCcccCCCCCCccCCCCCCeeEEEEEEecCCceEEEEEECCCCCCCCccccCCCCCCCCceEEEEEEEEEEEeCCCc
Confidence 99999999988888999999999987532 1367999999999999999999999999999999999999999
Q ss_pred CCCCEEEECCCcCCCCCCCCCccEEEEEEEecCCcccccCCCeEEEEeeCHHHHhCCCEEEEeCCCCEEEEEeCCCCCCC
Q 012891 305 DSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGKVQVKIPKGVQPG 384 (454)
Q Consensus 305 ~~G~~i~~~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~Isl~eAllG~~~~i~tldG~~~v~ip~~~~~g 384 (454)
++|++|+|+|+|++...+..+|||||+|+|+||+.|+|+|+||+++++|+|.||++|++++|+|+||+++|+||+++++|
T Consensus 230 ~~G~~i~l~G~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~v~tldg~i~v~ip~g~~~g 309 (380)
T PRK14276 230 ETGQQIRLQGQGEAGFNGGPYGDLYVVFRVEPSKKFERDGSTIYYTLPISFVQAALGDTVEVPTVHGDVELKIPAGTQTG 309 (380)
T ss_pred cCCcEEEEeccccCCCCCCCCcCEEEEEEEEECcceeeecceEEEEEecCHHHHhCCCeEEEEcCCCcEEEEECCCCCCC
Confidence 99999999999999866677899999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEEEcCCCcCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHHHHHh
Q 012891 385 QLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPTALNERQRAILEEFAEEE 433 (454)
Q Consensus 385 ~~~~l~g~Gmp~~~~~~~rGdL~v~~~V~~P~~ls~~q~~~l~~~~~~~ 433 (454)
++++|+|+|||..+. ..+|||||+|+|.||+.||++|+++|++|++.+
T Consensus 310 ~~~~i~g~G~p~~~~-~~~GDL~V~~~v~~P~~l~~~q~~~l~~~~~~~ 357 (380)
T PRK14276 310 KKFRLRGKGAPKLRG-GGNGDQHVTVNIVTPTKLNDAQKEALKAFAKAS 357 (380)
T ss_pred CEEEECCCCcCCCCC-CCCCCEEEEEEEECCCCCCHHHHHHHHHHHhhc
Confidence 999999999997642 246999999999999999999999999999754
No 12
>PRK14285 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=5.6e-77 Score=604.68 Aligned_cols=343 Identities=35% Similarity=0.660 Sum_probs=298.9
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHhhhhhhhhhhhcccccCCCCCccccCC
Q 012891 81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAG 160 (454)
Q Consensus 81 ~~~~Y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yd~~~~~g~~~~~~~~~ 160 (454)
..|||++|||+++||.+|||+|||+||++||||+|+++++|+++|++|++||+||+||.+|+.||++|..+.... +
T Consensus 2 ~~d~y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kr~~yd~~g~~~~~~~----~ 77 (365)
T PRK14285 2 KRDYYEILGLSKGASKDEIKKAYRKIAIKYHPDKNKGNKEAESIFKEATEAYEVLIDDNKRAQYDRFGHTAFEGG----G 77 (365)
T ss_pred CCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHcCcchhHHHHhcCcchhccC----C
Confidence 369999999999999999999999999999999998878899999999999999999999999999987653211 0
Q ss_pred CCCCccccCCCCcccccccccccCcccchhccccccc-------cccCCCCcEEEEEEEeeccccCcceeeeeceeeccc
Q 012891 161 DAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFEDE-------TSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCD 233 (454)
Q Consensus 161 ~~~~~~~~~~~~~f~~~~~~~f~~~f~~~F~~~f~~~-------~~~~g~di~~~l~itlee~~~G~~k~v~~~~~~~C~ 233 (454)
+++++. ++.++|... | .+|.++|+.+|++. .+.+++|+++.|.|||+|+|+|+++++.+++.+.|+
T Consensus 78 ~~~~~~--~g~~~~~~~----~-~~~~d~f~~~fgg~~~~~~~~~~~~g~di~~~l~vtlee~~~G~~~~i~~~r~~~C~ 150 (365)
T PRK14285 78 GFEGFS--GGFSGFSDI----F-EDFGDIFDSFFTGNRGQDKNRKHEKGQDLTYQIEISLEDAYLGYKNNINITRNMLCE 150 (365)
T ss_pred CccccC--CCccccccc----c-ccHHHHHHHhhcCCcCCCCCcCCCCCCCEEEEEEEEHHHhhCCeEEEEEeeecccCC
Confidence 011110 000111111 1 23556777777631 134688999999999999999999999999999999
Q ss_pred CCCCCCccCCCccccCCCccccceEEeC----CccccCCCCCCceEEeeeecccccCCceeeceEEEEEEecCccCCCCE
Q 012891 234 SCHGRGFPADAKTKICSTCRGIGRVTIP----PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVDSGDT 309 (454)
Q Consensus 234 ~C~G~G~~~~~~~~~C~~C~G~G~~~~~----~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~~~V~Ip~G~~~G~~ 309 (454)
.|+|+|...+.....|+.|+|+|+++.. .++.+|+.|+|+|.+++++|..|+|.|++.+.++++|.||||+++|++
T Consensus 151 ~C~G~G~~~~~~~~~C~~C~G~G~~~~~~G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~~ 230 (365)
T PRK14285 151 SCLGKKSEKGTSPSICNMCNGSGRVMQGGGFFRVTTTCPKCYGNGKIISNPCKSCKGKGSLKKKETIELKIPAGIDDNQQ 230 (365)
T ss_pred CCCCcccCCCCCCccCCCccCceeEEecCceeEEeeecCCCCCcccccCCCCCCCCCCCEEeccEEEEEEECCCCCCCCE
Confidence 9999999988888999999999987643 347899999999999999999999999999999999999999999999
Q ss_pred EEECCCcCCCCCCCCCccEEEEEEEecCCcccccCCCeEEEEeeCHHHHhCCCEEEEeCCCCE-EEEEeCCCCCCCcEEE
Q 012891 310 IRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGK-VQVKIPKGVQPGQLLV 388 (454)
Q Consensus 310 i~~~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~Isl~eAllG~~~~i~tldG~-~~v~ip~~~~~g~~~~ 388 (454)
|+|+|+|++.+.+..+|||||+|++++|+.|+|+|+||+++++|+|.|||+|++++|+||||+ ++|+||+++++|++++
T Consensus 231 i~~~g~G~~~~~~~~~GDL~v~i~v~~h~~f~R~G~dL~~~~~Isl~eAl~G~~~~i~tldG~~v~V~Ip~g~~~g~~ir 310 (365)
T PRK14285 231 IKMRGKGSVNPDNQQYGDLYIKILIKPHKIFKRNGKDLYATLPISFTQAALGKEIKIQTIASKKIKIKIPKGTENDEQII 310 (365)
T ss_pred EEEeeccccCCCCCCCCCEEEEEEEecCCCeEEeccceEEEEecCHHHHhCCCEEEEECCCCCEEEEEeCCCcCCCcEEE
Confidence 999999999876677899999999999999999999999999999999999999999999995 8999999999999999
Q ss_pred EcCCCcCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHHHHHhcc
Q 012891 389 LRGKGLAKNGLFLDHGDQYVRFRVNFPTALNERQRAILEEFAEEEIN 435 (454)
Q Consensus 389 l~g~Gmp~~~~~~~rGdL~v~~~V~~P~~ls~~q~~~l~~~~~~~~~ 435 (454)
|+|+|||..+.. .+|||||+|+|++|+.|+++|+++|++|++....
T Consensus 311 l~GkG~p~~~~~-~~GDL~V~~~v~~P~~l~~~q~~~l~~l~~~~~~ 356 (365)
T PRK14285 311 IKNEGMPILHTE-KFGNLILIIKIKTPKNLNSNAIKLLENLSKELKD 356 (365)
T ss_pred ECCCCccCCCCC-CCCCEEEEEEEECCCCCCHHHHHHHHHHHHHhcc
Confidence 999999976432 4699999999999999999999999999987643
No 13
>PRK14294 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=4.6e-77 Score=606.32 Aligned_cols=350 Identities=40% Similarity=0.720 Sum_probs=303.8
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHhhhhhhhhhhhcccccCCCCCccccCC
Q 012891 81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAG 160 (454)
Q Consensus 81 ~~~~Y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yd~~~~~g~~~~~~~~~ 160 (454)
..|||+||||+++||.+|||+|||+||++||||+++.+++|+++|++|++||+||+||.+|+.||+||+.+....
T Consensus 3 ~~d~y~~lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~~~~~f~~~~~Ay~vL~d~~~r~~yD~~G~~g~~~~----- 77 (366)
T PRK14294 3 KRDYYEILGVTRDASEEEIKKSYRKLAMKYHPDRNPGDKEAEELFKEAAEAYEVLSDPKKRGIYDQYGHEGLSGT----- 77 (366)
T ss_pred CCChHHHhCCCCCCCHHHHHHHHHHHHHHHCCCCCCCchHHHHHHHHHHHHHHHhccHHHHHHHHhhccccccCC-----
Confidence 479999999999999999999999999999999998778899999999999999999999999999987654311
Q ss_pred CCCCccccCCCCcccccccccccCcccchhccccc-c-c-------cccCCCCcEEEEEEEeeccccCcceeeeeceeec
Q 012891 161 DAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFE-D-E-------TSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVP 231 (454)
Q Consensus 161 ~~~~~~~~~~~~~f~~~~~~~f~~~f~~~F~~~f~-~-~-------~~~~g~di~~~l~itlee~~~G~~k~v~~~~~~~ 231 (454)
++.++ .+|.++| +.|.++|+++|+ + . ...+++|+++.|.|||+|+|+|+++++.+.+.+.
T Consensus 78 ~~~~~------~~~~~~~-----~~~~d~f~~~fg~g~~~~~~~~~~~~~g~d~~~~l~lslee~~~G~~~~i~~~r~~~ 146 (366)
T PRK14294 78 GFSGF------SGFDDIF-----SSFGDIFEDFFGFGGGRRGRSRTAVRAGADLRYDLTLPFLEAAFGTEKEIRIQKLET 146 (366)
T ss_pred CCCCc------Cccccch-----hhhhhhHHHhhccCCCcCCcccCCCCCCCCceEEEEeeHHHhcCCeEEEEEeeeccc
Confidence 11111 0111111 123445555554 1 1 1346889999999999999999999999999999
Q ss_pred ccCCCCCCccCCCccccCCCccccceEEeC----CccccCCCCCCceEEeeeecccccCCceeeceEEEEEEecCccCCC
Q 012891 232 CDSCHGRGFPADAKTKICSTCRGIGRVTIP----PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVDSG 307 (454)
Q Consensus 232 C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~----~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~~~V~Ip~G~~~G 307 (454)
|+.|.|+|........+|+.|+|.|.+... .++.+|+.|+|+|+++...|..|.|.|++.+.++++|.||||+++|
T Consensus 147 C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G 226 (366)
T PRK14294 147 CEECHGSGCEPGTSPTTCPQCGGSGQVTQSQGFFSIRTTCPRCRGMGKVIVSPCKTCHGQGRVRVSKTVQVKIPAGVDTG 226 (366)
T ss_pred CCCCCCccccCCCCcccCCCcCCeEEEEEEeeeEEEEeeCCCCCCcCeecCcCCCCCCCceEeecceeEEEecCCCCcCC
Confidence 999999999988888999999999987532 2478999999999999999999999999999999999999999999
Q ss_pred CEEEECCCcCCCCCCCCCccEEEEEEEecCCcccccCCCeEEEEeeCHHHHhCCCEEEEeCCCCEEEEEeCCCCCCCcEE
Q 012891 308 DTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGKVQVKIPKGVQPGQLL 387 (454)
Q Consensus 308 ~~i~~~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~Isl~eAllG~~~~i~tldG~~~v~ip~~~~~g~~~ 387 (454)
++|+|+|+|++...++.+|||||+|+++||+.|+|+|+||++++.|+|.+||+|++++|+||||+++|+||+++++|+++
T Consensus 227 ~~i~~~g~G~~~~~~~~~GDl~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tldG~~~v~ip~g~~~g~~i 306 (366)
T PRK14294 227 SRLRLRGEGEAGVRGGPPGDLYVFLTVEPHEFFERDGNDVHCKVPISFVQAALGAQIEVPTLEGERELKIPKGTQPGDIF 306 (366)
T ss_pred cEEEEccCccCCCCCCCCCcEEEEEEEccCCcceecCCCEEEEEEeCHHHHhCCCeEEEECCCCcEEEEECCCcCCCCEE
Confidence 99999999998777788999999999999999999999999999999999999999999999999899999999999999
Q ss_pred EEcCCCcCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHHHHHhcccCCCChhhhhhHHH
Q 012891 388 VLRGKGLAKNGLFLDHGDQYVRFRVNFPTALNERQRAILEEFAEEEINNENNTSAEENWLYQ 449 (454)
Q Consensus 388 ~l~g~Gmp~~~~~~~rGdL~v~~~V~~P~~ls~~q~~~l~~~~~~~~~~~~~~~~~~~~~~~ 449 (454)
+|+|+|||..+. ..+|||||+|+|.+|+.|+++|+++|++|+..+. +....+..+||..
T Consensus 307 ri~G~G~p~~~~-~~~GDL~V~~~v~~P~~l~~~q~~ll~~~~~~~~--~~~~~~~~~~~~~ 365 (366)
T PRK14294 307 RFKGKGIPSLRG-GGRGDQIIEVEVKVPTRLTKKQEELLTEFARLES--EKIGNKLRNLFKS 365 (366)
T ss_pred EECCCCCCCCCC-CCCCCEEEEEEEECCCCCCHHHHHHHHHHHHhcc--ccHHHHHHHHhhc
Confidence 999999997643 2479999999999999999999999999998653 2334567888863
No 14
>PRK14301 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=6.6e-77 Score=605.79 Aligned_cols=352 Identities=41% Similarity=0.736 Sum_probs=301.9
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHhhhhhhhhhhhcccccCCCCCccccCC
Q 012891 81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAG 160 (454)
Q Consensus 81 ~~~~Y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yd~~~~~g~~~~~~~~~ 160 (454)
..|||++|||+++||.+|||+|||+||++||||+++++++|+++|++|++||+||+||.+|+.||++|..+..+. +
T Consensus 3 ~~~~y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kr~~yD~~g~~g~~~~----~ 78 (373)
T PRK14301 3 QRDYYEVLGVSRDASEDEIKKAYRKLALQYHPDRNPDNPEAEQKFKEAAEAYEVLRDAEKRARYDRFGHAGVNGN----G 78 (373)
T ss_pred CCChHHhcCCCCCCCHHHHHHHHHHHHHHhCCCcCCCChHHHHHHHHHHHHHHHhcchhhhhhhhhccccccccC----C
Confidence 479999999999999999999999999999999998778899999999999999999999999999987654211 1
Q ss_pred CCCCccccCCCCcccccccccccCcccchhcccccc--------ccccCCCCcEEEEEEEeeccccCcceeeeeceeecc
Q 012891 161 DAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFED--------ETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPC 232 (454)
Q Consensus 161 ~~~~~~~~~~~~~f~~~~~~~f~~~f~~~F~~~f~~--------~~~~~g~di~~~l~itlee~~~G~~k~v~~~~~~~C 232 (454)
++++|. +..++| +.|.++|+.+|+. ..+.+++|+++.|.|||+|+|+|+++++.+.+.+.|
T Consensus 79 ~~~g~~--~~~~~~---------~~f~d~f~~~fg~g~~~~~~~~~~~~g~di~~~l~vtLee~~~G~~k~i~~~r~~~C 147 (373)
T PRK14301 79 GFGGFS--SAEDIF---------SHFSDIFGDLFGFSGGGSRRGPRPQAGSDLRYNLTVSFRQAAKGDEVTLRIPKNVTC 147 (373)
T ss_pred CCCCcc--cccccc---------cchHHHHHHHhhccCcccccCCCCCCCCCEEEEEeccHHHHhCCceEEEEeeecccC
Confidence 111111 001111 1233445544431 123468899999999999999999999999999999
Q ss_pred cCCCCCCccCCCccccCCCccccceEEeC----CccccCCCCCCceEEeeeecccccCCceeeceEEEEEEecCccCCCC
Q 012891 233 DSCHGRGFPADAKTKICSTCRGIGRVTIP----PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVDSGD 308 (454)
Q Consensus 233 ~~C~G~G~~~~~~~~~C~~C~G~G~~~~~----~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~~~V~Ip~G~~~G~ 308 (454)
+.|+|+|........+|+.|+|+|.+... ..+.+|+.|+|+|+++...|..|+|.|++.+.++++|.||||+++|+
T Consensus 148 ~~C~G~G~~~~~~~~~C~~C~G~G~v~~~~G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~ 227 (373)
T PRK14301 148 DDCGGSGAAPGTSPETCRHCGGSGQVRQSQGFFQIAVPCPVCRGEGRVITHPCPKCKGSGIVQQTRELKVRIPAGVDTGS 227 (373)
T ss_pred CCCCCcccCCCCCCcccCCccCeeEEEEEeeeEEEEEeCCCCCceeeecCCCCCCCCCCceeccceEEEEEeCCCCcCCC
Confidence 99999999988888999999999987543 24789999999999999999999999999999999999999999999
Q ss_pred EEEECCCcCCCCCCCCCccEEEEEEEecCCcccccCCCeEEEEeeCHHHHhCCCEEEEeCCCCEEEEEeCCCCCCCcEEE
Q 012891 309 TIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGKVQVKIPKGVQPGQLLV 388 (454)
Q Consensus 309 ~i~~~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~Isl~eAllG~~~~i~tldG~~~v~ip~~~~~g~~~~ 388 (454)
+|+|+|+|++...+..+|||||+|+|++|+.|+|+|+||+++++|+|.+||+|++++|+||||+++|+||+++++|++++
T Consensus 228 ~i~~~g~G~~~~~~~~~GDLiv~i~v~~h~~f~r~G~DL~~~~~Isl~eAl~G~~~~v~tldG~i~v~ip~g~~~g~~~r 307 (373)
T PRK14301 228 RLRLRGEGEPGVHGGPPGDLYVVITVEDDKIFQRQGQDLVVTQEISFVQAALGDRIEVPTLDDPVTLDIPKGTQSGEVFR 307 (373)
T ss_pred EEEEeccccCCCCCCCCcCEEEEEEEEECCCceeecCcEEEEEEecHHHHhCCCeEEEecCCccEEEEECCCcCCCcEEE
Confidence 99999999987767789999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EcCCCcCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHHHHHhcccCCCChhhhhhHHHh
Q 012891 389 LRGKGLAKNGLFLDHGDQYVRFRVNFPTALNERQRAILEEFAEEEINNENNTSAEENWLYQQ 450 (454)
Q Consensus 389 l~g~Gmp~~~~~~~rGdL~v~~~V~~P~~ls~~q~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 450 (454)
|+|+|||..+. ..+|||||+|+|.||+.|+++|+++|++|+..+.. +-.-+--.||..+
T Consensus 308 i~g~G~p~~~~-~~~GDL~I~~~V~~P~~l~~~q~~~l~~l~~~~~~--~~~~~~~~~~~~~ 366 (373)
T PRK14301 308 LRGKGLPYLGS-SQKGDLLVEVSVVTPTKLTKRQEELLREFEALEEE--KPLEKVKKFFKKI 366 (373)
T ss_pred EcCCCCCCCCC-CCCCCEEEEEEEECCCCCCHHHHHHHHHHHhhccc--CHHHHHHHHHHHH
Confidence 99999997643 24799999999999999999999999999976421 1123345677665
No 15
>PRK14297 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=9e-77 Score=607.00 Aligned_cols=340 Identities=39% Similarity=0.736 Sum_probs=295.3
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHhhhhhhhhhhhcccccCCCCCccccCC
Q 012891 81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAG 160 (454)
Q Consensus 81 ~~~~Y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yd~~~~~g~~~~~~~~~ 160 (454)
..|||+||||+++||.+|||+|||+||++||||+++.+++|+++|++|++||+||+||.+|++||++|..+..... ..
T Consensus 3 ~~d~y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yD~~G~~~~~~~~--~~ 80 (380)
T PRK14297 3 SKDYYEVLGLEKGASDDEIKKAFRKLAIKYHPDKNKGNKEAEEKFKEINEAYQVLSDPQKKAQYDQFGTADFNGAG--GF 80 (380)
T ss_pred CCChHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHhcCHhhhCchhhcCcccccccC--CC
Confidence 4699999999999999999999999999999999987788999999999999999999999999999876543110 00
Q ss_pred CCCCccccCCCCcccccccccccCcccchhcccccc---------ccccCCCCcEEEEEEEeeccccCcceeeeeceeec
Q 012891 161 DAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFED---------ETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVP 231 (454)
Q Consensus 161 ~~~~~~~~~~~~~f~~~~~~~f~~~f~~~F~~~f~~---------~~~~~g~di~~~l~itlee~~~G~~k~v~~~~~~~ 231 (454)
+.++|. .|. + ..+ .+|.++|+.+|++ ..+.+++|+++.|.|||+|+|+|+++++.+.+.+.
T Consensus 81 ~~~~~~------~~~-~--~~~-~~~~d~f~~~fgg~~g~~~~~~~~~~kg~di~~~l~vsLee~~~G~~~~i~~~r~~~ 150 (380)
T PRK14297 81 GSGGFG------GFD-F--SDM-GGFGDIFDSFFGGGFGSSSRRRNGPQRGADIEYTINLTFEEAVFGVEKEISVTRNEN 150 (380)
T ss_pred CCCCCC------CcC-c--ccc-cchhHHHHHHhccCccccccccCCCCCCCCEEEEEEEEHHHhcCCeEEEEEeeeecc
Confidence 000110 010 0 000 1244556655542 11346889999999999999999999999999999
Q ss_pred ccCCCCCCccCCCccccCCCccccceEEeC--------CccccCCCCCCceEEeeeecccccCCceeeceEEEEEEecCc
Q 012891 232 CDSCHGRGFPADAKTKICSTCRGIGRVTIP--------PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAG 303 (454)
Q Consensus 232 C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~--------~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~~~V~Ip~G 303 (454)
|+.|.|+|...+....+|+.|+|+|.+... ..+.+|+.|+|+|.+++++|..|+|.|++.+.++++|.||||
T Consensus 151 C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~i~V~Ip~G 230 (380)
T PRK14297 151 CETCNGTGAKPGTSPKTCDKCGGTGQIRVQRNTPLGSFVSTTTCDKCGGSGKVIEDPCNKCHGKGKVRKNRKIKVNVPAG 230 (380)
T ss_pred CCCcccccccCCCcCccCCCccCeEEEEEEEEcCCceeEEEEeCCCCCCCceEcCCCCCCCCCCeEEEeEeEEEEEeCCC
Confidence 999999999988888999999999987532 247799999999999999999999999999999999999999
Q ss_pred cCCCCEEEECCCcCCCCCCCCCccEEEEEEEecCCcccccCCCeEEEEeeCHHHHhCCCEEEEeCCCCEEEEEeCCCCCC
Q 012891 304 VDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGKVQVKIPKGVQP 383 (454)
Q Consensus 304 ~~~G~~i~~~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~Isl~eAllG~~~~i~tldG~~~v~ip~~~~~ 383 (454)
+++|++|+|+|+|++...+..+|||||+|+|++|+.|+|+|+||+++++|+|.|||+|++++|+|+||+++|+||+++++
T Consensus 231 ~~~G~~I~l~g~G~~~~~~~~~GDL~v~v~v~~h~~f~R~G~DL~~~~~Isl~eAl~G~~~~i~~ldg~~~v~ip~g~~~ 310 (380)
T PRK14297 231 VDTGNVIPLRGQGEHGKNGGPTGDLYINIRVAPHKTFKRKGFDIYIDKHISFAKAALGTEIKVPTVDGEVKYEVPAGTQP 310 (380)
T ss_pred CCCCcEEEEecCccCCCCCCCCccEEEEEEEcCCCCEEEeCCCEEEEEEeCHHHHhCCCcEEEEcCCCcEEEEECCCcCC
Confidence 99999999999999876677899999999999999999999999999999999999999999999999999999999999
Q ss_pred CcEEEEcCCCcCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHHHHHh
Q 012891 384 GQLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPTALNERQRAILEEFAEEE 433 (454)
Q Consensus 384 g~~~~l~g~Gmp~~~~~~~rGdL~v~~~V~~P~~ls~~q~~~l~~~~~~~ 433 (454)
|++++|+|+|||..+. ..+|||||+|+|+||+.||++|+++|++|+..+
T Consensus 311 g~~~ri~g~G~p~~~~-~~~GDL~v~~~v~~P~~ls~~q~~~l~~~~~~~ 359 (380)
T PRK14297 311 GTVFRLKGKGVPRVNS-TGRGNQYVTVIVDIPKKLNSKQKEALTMFMEAS 359 (380)
T ss_pred CCEEEEcCCCcCCCCC-CCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHhc
Confidence 9999999999997532 247999999999999999999999999999865
No 16
>PRK14287 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=7.9e-77 Score=604.80 Aligned_cols=332 Identities=40% Similarity=0.740 Sum_probs=291.5
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHhhhhhhhhhhhcccccCCCCCccccCC
Q 012891 81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAG 160 (454)
Q Consensus 81 ~~~~Y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yd~~~~~g~~~~~~~~~ 160 (454)
..|||+||||+++||.+|||+|||+||++||||+|+ +++|+++|++|++||+||+||.+|++||+||..+..... +.+
T Consensus 3 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HpD~~~-~~~~~~~f~~i~~Ay~~L~d~~kR~~YD~~G~~~~~~~~-~~~ 80 (371)
T PRK14287 3 KRDYYEVLGVDRNASVDEVKKAYRKLARKYHPDVNK-APDAEDKFKEVKEAYDTLSDPQKKAHYDQFGHTDPNQGF-GGG 80 (371)
T ss_pred CCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCC-ChhHHHHHHHHHHHHHHhCcHhHHHHHHhhCCccccccc-CCC
Confidence 469999999999999999999999999999999997 478899999999999999999999999999876542110 000
Q ss_pred CCCCccccCCCCcccccccccccCcccchhcccccc-------ccccCCCCcEEEEEEEeeccccCcceeeeeceeeccc
Q 012891 161 DAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFED-------ETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCD 233 (454)
Q Consensus 161 ~~~~~~~~~~~~~f~~~~~~~f~~~f~~~F~~~f~~-------~~~~~g~di~~~l~itlee~~~G~~k~v~~~~~~~C~ 233 (454)
++ ..|. +|.++|+.+|++ ..+.+++|+++.|.|||+|+|.|+++++.+.+.+.|+
T Consensus 81 ~~---------~~f~---------~~~d~f~~~fgg~~~~~~~~~~~~g~d~~~~l~vslee~~~G~~~~i~~~r~~~C~ 142 (371)
T PRK14287 81 GA---------GDFG---------GFSDIFDMFFGGGGGRRNPNAPRQGADLQYTMTLEFKEAVFGKETEIEIPREETCG 142 (371)
T ss_pred CC---------cccc---------chHHHHHhhhccccCCCCCCCCCCCCCEEEEEEEEHHHhcCCeEEEEEEeeeccCC
Confidence 00 0110 123445555542 1134688999999999999999999999999999999
Q ss_pred CCCCCCccCCCccccCCCccccceEEeC--------CccccCCCCCCceEEeeeecccccCCceeeceEEEEEEecCccC
Q 012891 234 SCHGRGFPADAKTKICSTCRGIGRVTIP--------PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVD 305 (454)
Q Consensus 234 ~C~G~G~~~~~~~~~C~~C~G~G~~~~~--------~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~~~V~Ip~G~~ 305 (454)
.|+|+|........+|+.|+|+|.+... ..+.+|+.|.|+|.+++++|..|.|.|++.+.++++|.||||++
T Consensus 143 ~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~ 222 (371)
T PRK14287 143 TCHGSGAKPGTKPETCSHCGGSGQLNVEQNTPFGRVVNRRVCHHCEGTGKIIKQKCATCGGKGKVRKRKKINVKVPAGID 222 (371)
T ss_pred CCCCcccCCCCCCcccCCCCCEEEEEEEEecCCceEEEEEeCCCCCCCCccccccCCCCCCeeEEeeeEEEEEEECCcCC
Confidence 9999999988888999999999987532 13679999999999999999999999999999999999999999
Q ss_pred CCCEEEECCCcCCCCCCCCCccEEEEEEEecCCcccccCCCeEEEEeeCHHHHhCCCEEEEeCCCCEEEEEeCCCCCCCc
Q 012891 306 SGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGKVQVKIPKGVQPGQ 385 (454)
Q Consensus 306 ~G~~i~~~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~Isl~eAllG~~~~i~tldG~~~v~ip~~~~~g~ 385 (454)
+|++|+|+|+|++...+..+|||||+|+++||+.|+|+|+||++++.|+|.+|++|++++|+|+||+++|+||+++++|+
T Consensus 223 ~G~~i~~~G~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~~ldg~i~v~ip~g~~~g~ 302 (371)
T PRK14287 223 HGQQLRVSGQGEAGVNGGPPGDLYVVFNVKPHEFFERDGDDIYCEMPLTFPQVALGDEIEVPTLNGKVKLKIPAGTQTGT 302 (371)
T ss_pred CCCEEEEccCCcCCCCCCCCccEEEEEEEecCCCEEEecCCeEEEEeccHHHHhCCCEEEEEcCCCCEEEEECCCccCCc
Confidence 99999999999997666789999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEcCCCcCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHHHHHh
Q 012891 386 LLVLRGKGLAKNGLFLDHGDQYVRFRVNFPTALNERQRAILEEFAEEE 433 (454)
Q Consensus 386 ~~~l~g~Gmp~~~~~~~rGdL~v~~~V~~P~~ls~~q~~~l~~~~~~~ 433 (454)
+++|+|+|||..+. ..+|||||+|+|.+|+.|+++|+++|++|++.+
T Consensus 303 ~~ri~g~G~p~~~~-~~~GDL~V~~~v~~P~~l~~~q~~ll~~l~~~~ 349 (371)
T PRK14287 303 SFRLRGKGVPNVHG-RGQGDQHVQVRVVTPKNLTEKEKELMREFAGMS 349 (371)
T ss_pred EEEEcCCCccCCCC-CCCCCEEEEEEEEcCCCCCHHHHHHHHHHHhhh
Confidence 99999999997642 247999999999999999999999999999764
No 17
>PRK14280 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=1.1e-76 Score=605.28 Aligned_cols=337 Identities=43% Similarity=0.765 Sum_probs=293.1
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHhhhhhhhhhhhcccccCCCCCccccCC
Q 012891 81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAG 160 (454)
Q Consensus 81 ~~~~Y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yd~~~~~g~~~~~~~~~ 160 (454)
..|||+||||+++||.+|||+|||+||++||||+++ ++.|+++|++|++||+||+||.+|++||+||+.+..... +.
T Consensus 3 ~~~~y~iLgv~~~a~~~eik~ayr~la~~~HpD~~~-~~~a~~~f~~i~~Ay~vL~d~~kr~~yD~~G~~~~~~~~-~~- 79 (376)
T PRK14280 3 KRDYYEVLGVSKSASKDEIKKAYRKLSKKYHPDINK-EEGADEKFKEISEAYEVLSDDQKRAQYDQFGHAGPNQGF-GG- 79 (376)
T ss_pred CCChHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCC-CccHHHHHHHHHHHHHHhccHhHHHHHHhcCccccccCc-CC-
Confidence 369999999999999999999999999999999997 467899999999999999999999999999876543110 00
Q ss_pred CCCCccccCCCCcccccccccccCcccchhccccccc-------cccCCCCcEEEEEEEeeccccCcceeeeeceeeccc
Q 012891 161 DAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFEDE-------TSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCD 233 (454)
Q Consensus 161 ~~~~~~~~~~~~~f~~~~~~~f~~~f~~~F~~~f~~~-------~~~~g~di~~~l~itlee~~~G~~k~v~~~~~~~C~ 233 (454)
.++. +.+|.. .| +|.++|+.+|++. .+.+++|+.+.|.|||+|+|+|+++++.+.+.+.|+
T Consensus 80 --~~~~----~~~~~~----~~--~~~d~f~~~fgg~~~~~~~~~~~kg~di~~~l~vtLee~~~G~~~~i~~~r~~~C~ 147 (376)
T PRK14280 80 --GGFG----GGDFGG----GF--GFEDIFSSFFGGGGRRRDPNAPRQGADLQYTMTLTFEEAVFGKEKEIEIPKEETCD 147 (376)
T ss_pred --CCCC----CCCccc----cc--cchhhHHHHhCCccccCcccccccccCEEEEEEEEHHHHhCCceeEEEEeeeccCC
Confidence 0000 001110 01 2345566666421 124688999999999999999999999999999999
Q ss_pred CCCCCCccCCCccccCCCccccceEEeC--------CccccCCCCCCceEEeeeecccccCCceeeceEEEEEEecCccC
Q 012891 234 SCHGRGFPADAKTKICSTCRGIGRVTIP--------PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVD 305 (454)
Q Consensus 234 ~C~G~G~~~~~~~~~C~~C~G~G~~~~~--------~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~~~V~Ip~G~~ 305 (454)
.|+|+|...+....+|+.|+|+|.+... ..+.+|+.|+|+|.+++.+|..|+|.|++.+.++++|.||||++
T Consensus 148 ~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~i~V~Ip~G~~ 227 (376)
T PRK14280 148 TCHGSGAKPGTSKETCSHCGGSGQVSVEQNTPFGRVVNRQTCPHCNGTGQEIKEKCPTCHGKGKVRKRKKINVKIPAGVD 227 (376)
T ss_pred CCCCcccCCCCCCccCCCCCCEEEEEEEeecCCceEEEEEEcCCCCCCCceecCCCCCCCCceEEEEEEEEEEEeCCCCc
Confidence 9999999988888999999999987532 13678999999999999999999999999999999999999999
Q ss_pred CCCEEEECCCcCCCCCCCCCccEEEEEEEecCCcccccCCCeEEEEeeCHHHHhCCCEEEEeCCCCEEEEEeCCCCCCCc
Q 012891 306 SGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGKVQVKIPKGVQPGQ 385 (454)
Q Consensus 306 ~G~~i~~~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~Isl~eAllG~~~~i~tldG~~~v~ip~~~~~g~ 385 (454)
+|++|+|+|+|++...+..+|||||+|+|+||+.|+|+|+||++++.|+|.|||+|+++.|+||||++.|+||+++++|+
T Consensus 228 ~G~~i~l~G~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tldg~i~v~ip~g~~~g~ 307 (376)
T PRK14280 228 NGQQIRVSGEGEPGVNGGPAGDLYVVFRVRPHEFFERDGDDIYCEMPLTFAQAALGDEIEVPTLHGKVKLKIPAGTQTGT 307 (376)
T ss_pred CCcEEEEcccccCCCCCCCCcCEEEEEEEecCCCeEEecCCEEEEEecCHHHHhCCCEEEEecCCceEEEEECCCCCCCc
Confidence 99999999999997767788999999999999999999999999999999999999999999999998999999999999
Q ss_pred EEEEcCCCcCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHHHHHh
Q 012891 386 LLVLRGKGLAKNGLFLDHGDQYVRFRVNFPTALNERQRAILEEFAEEE 433 (454)
Q Consensus 386 ~~~l~g~Gmp~~~~~~~rGdL~v~~~V~~P~~ls~~q~~~l~~~~~~~ 433 (454)
+++|+|+|||..+. ..+|||||+|+|.||+.||++|+++|++|+..+
T Consensus 308 ~~~i~g~G~p~~~~-~~~GDL~v~~~v~~P~~Ls~~q~~~l~~l~~~~ 354 (376)
T PRK14280 308 QFRLKGKGVPNVRG-YGQGDQYVVVRVVTPTKLTDRQKELLREFAELS 354 (376)
T ss_pred EEEEcCCCCCCCCC-CCCCCEEEEEEEECCCCCCHHHHHHHHHHHhhc
Confidence 99999999997632 247999999999999999999999999998753
No 18
>PTZ00037 DnaJ_C chaperone protein; Provisional
Probab=100.00 E-value=5.7e-77 Score=611.25 Aligned_cols=326 Identities=30% Similarity=0.533 Sum_probs=283.7
Q ss_pred CCCCCCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHhhhhhhhhhhhcccccCCCCCc
Q 012891 76 SCYSSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENE 155 (454)
Q Consensus 76 ~~~~~~~~~Y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yd~~~~~g~~~~ 155 (454)
+..+...|||+||||+++||.+|||+|||+||++||||+|++ .++|++|++||+||+||.+|+.||++|..+..+.
T Consensus 22 ~~~~~~~d~Y~vLGV~~~As~~eIKkAYrkla~k~HPDk~~~----~e~F~~i~~AYevLsD~~kR~~YD~~G~~~~~~~ 97 (421)
T PTZ00037 22 KREVDNEKLYEVLNLSKDCTTSEIKKAYRKLAIKHHPDKGGD----PEKFKEISRAYEVLSDPEKRKIYDEYGEEGLEGG 97 (421)
T ss_pred cccccchhHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCch----HHHHHHHHHHHHHhccHHHHHHHhhhcchhcccC
Confidence 344556899999999999999999999999999999999862 4899999999999999999999999976543210
Q ss_pred cccCCCCCCccccCCCCcccccccccccCcccchhcccccc----ccccCCCCcEEEEEEEeeccccCcceeeeeceeec
Q 012891 156 KYSAGDAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFED----ETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVP 231 (454)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~f~~~~~~~f~~~f~~~F~~~f~~----~~~~~g~di~~~l~itlee~~~G~~k~v~~~~~~~ 231 (454)
. ++. ++.++|+.+|++ ....+++|+.+.|.|||+|+|+|+++++.+.+.+.
T Consensus 98 ----~--------~~~-------------d~~d~f~~~Fggg~~~~~~~rg~di~~~l~vtLee~~~G~~~~i~~~r~~~ 152 (421)
T PTZ00037 98 ----E--------QPA-------------DASDLFDLIFGGGRKPGGKKRGEDIVSHLKVTLEQIYNGAMRKLAINKDVI 152 (421)
T ss_pred ----C--------CCc-------------chhhhHHHhhccccccccccCCCCEEEEeeeeHHHHhCCCceEEEeecccc
Confidence 0 000 112333434432 12356899999999999999999999999999999
Q ss_pred ccCCCCCCccCCCccccCCCccccceEEeC--------CccccCCCCCCceEEee--eecccccCCceeeceEEEEEEec
Q 012891 232 CDSCHGRGFPADAKTKICSTCRGIGRVTIP--------PFTSTCSTCKGLGRIIK--DHCMTCKGSGVVDGVKEVKVTIP 301 (454)
Q Consensus 232 C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~--------~~~~~C~~C~G~G~~~~--~~C~~C~g~G~~~~~~~~~V~Ip 301 (454)
|+.|+|+|.... ...+|+.|+|+|.++.. .++.+|+.|+|+|+++. ++|..|+|.|++.+.++++|.||
T Consensus 153 C~~C~G~G~~~~-~~~~C~~C~G~G~~~~~~~~g~~~~q~~~~C~~C~G~G~~i~~~~~C~~C~G~g~v~~~~~l~V~Ip 231 (421)
T PTZ00037 153 CANCEGHGGPKD-AFVDCKLCNGQGIRVQIRQMGSMIHQTQSTCNSCNGQGKIIPESKKCKNCSGKGVKKTRKILEVNID 231 (421)
T ss_pred ccccCCCCCCCC-CCccCCCCCCCCeEEEEEeecceeeEEEEeCCCCCCcceeccccccCCcCCCcceeeeeeEEEEeeC
Confidence 999999998644 57899999999975321 24679999999999985 89999999999999999999999
Q ss_pred CccCCCCEEEECCCcCCCCCCCCCccEEEEEEEecCCcccccCCCeEEEEeeCHHHHhCCCEEEEeCCCCE-EEEEeCCC
Q 012891 302 AGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGK-VQVKIPKG 380 (454)
Q Consensus 302 ~G~~~G~~i~~~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~Isl~eAllG~~~~i~tldG~-~~v~ip~~ 380 (454)
||+.+|++|+|+|+|++.+ ++.||||||+|+++||+.|+|+|+||+++++|+|.+||+|+++.|+||||+ +.|+||++
T Consensus 232 ~G~~dG~~I~~~G~Gd~~~-~~~pGDLiv~I~~~ph~~F~R~G~DL~~~~~Isl~eAllG~~i~I~tLdG~~l~I~ip~g 310 (421)
T PTZ00037 232 KGVPNQHKITFHGEADEKP-NEIPGNVVFILNEKPHDTFKREGGDLFITKKISLYEALTGFVFYITHLDGRKLLVNTPPG 310 (421)
T ss_pred CCCCCCcEEEEecccCCCC-CCCCCcEEEEEEecCCCCcEEeCCeEEEEEeCCHHHHhcCCEEEeeCCCCCeEEEEeCCC
Confidence 9999999999999999965 678999999999999999999999999999999999999999999999997 79999988
Q ss_pred --CCCCcEEEEcCCCcCCCCCCCCCCcEEEEEEEECC--CCCCHHHHHHHHHHHHH
Q 012891 381 --VQPGQLLVLRGKGLAKNGLFLDHGDQYVRFRVNFP--TALNERQRAILEEFAEE 432 (454)
Q Consensus 381 --~~~g~~~~l~g~Gmp~~~~~~~rGdL~v~~~V~~P--~~ls~~q~~~l~~~~~~ 432 (454)
++||++++|+|+|||..+.+..+|||||+|+|+|| +.||++|+++|++|+..
T Consensus 311 ~vt~pg~~~~I~geGmP~~~~~~~rGDL~V~~~V~~P~~~~Ls~~qk~ll~~l~~~ 366 (421)
T PTZ00037 311 EVVKPGDIKVINNEGMPTYKSPFKKGNLYVTFEVIFPVDRKFTNEEKEILKSLFPQ 366 (421)
T ss_pred cccCCCcEEEeCCCCcccCCCCCCCCCEEEEEEEEcCCCCCCCHHHHHHHHHhccC
Confidence 99999999999999976443458999999999999 99999999999999864
No 19
>PRK10767 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=3.8e-76 Score=601.31 Aligned_cols=336 Identities=45% Similarity=0.838 Sum_probs=294.3
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHhhhhhhhhhhhcccccCCCCCccccCC
Q 012891 81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAG 160 (454)
Q Consensus 81 ~~~~Y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yd~~~~~g~~~~~~~~~ 160 (454)
..|||+||||+++||.+|||+|||+||++||||+++++++|+++|++|++||++|+||.+|+.||++|..+..... +
T Consensus 3 ~~d~y~iLgv~~~as~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~-~-- 79 (371)
T PRK10767 3 KRDYYEVLGVSRNASEDEIKKAYRKLAMKYHPDRNPGDKEAEEKFKEIKEAYEVLSDPQKRAAYDQYGHAAFEQGG-G-- 79 (371)
T ss_pred CCChHHhcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCcHHHHHHHHHHHHHHHHhcchhhhhHhhhccccccccCC-C--
Confidence 4699999999999999999999999999999999987788999999999999999999999999999765543110 0
Q ss_pred CCCCccccCCCCcccccccccccCcccchhcccccc------ccccCCCCcEEEEEEEeeccccCcceeeeeceeecccC
Q 012891 161 DAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFED------ETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDS 234 (454)
Q Consensus 161 ~~~~~~~~~~~~~f~~~~~~~f~~~f~~~F~~~f~~------~~~~~g~di~~~l~itlee~~~G~~k~v~~~~~~~C~~ 234 (454)
..+|. +..+| ++.|.++|+.+|++ ..+.+++|+++.|.|||+|+|+|+++++.+.+.+.|+.
T Consensus 80 -~~~~~---~~~~~--------~~~f~~~f~~~fgg~~~~~~~~~~~g~di~~~l~vsLee~~~G~~~~v~~~r~~~C~~ 147 (371)
T PRK10767 80 -GGGFG---GGGGF--------GDIFGDIFGDIFGGGRGGGRQRARRGADLRYNMEITLEEAVRGVTKEIRIPTLVTCDT 147 (371)
T ss_pred -CCCCC---Ccccc--------ccchhhhhhhhccCCccccCCCCCCCCCeEEEEEeehHHhhCCeeEEEeeeecccCCC
Confidence 01110 00011 12234455555542 12357899999999999999999999999999999999
Q ss_pred CCCCCccCCCccccCCCccccceEEeC----CccccCCCCCCceEEeeeecccccCCceeeceEEEEEEecCccCCCCEE
Q 012891 235 CHGRGFPADAKTKICSTCRGIGRVTIP----PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVDSGDTI 310 (454)
Q Consensus 235 C~G~G~~~~~~~~~C~~C~G~G~~~~~----~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~~~V~Ip~G~~~G~~i 310 (454)
|.|+|.........|+.|+|+|.+... .++.+|+.|+|+|++++++|..|.|.|++.+.++++|.||||+++|++|
T Consensus 148 C~G~G~~~~~~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~~i 227 (371)
T PRK10767 148 CHGSGAKPGTSPKTCPTCHGAGQVRMQQGFFTVQQTCPTCHGRGKIIKDPCKKCHGQGRVEKEKTLSVKIPAGVDTGDRI 227 (371)
T ss_pred CCCcccCCCCCCccCCCCCCeeEEEEeeceEEEEEeCCCCCCceeECCCCCCCCCCCceEeeeeeEEEecCCCCCCCcEE
Confidence 999999988888899999999987532 2467999999999999999999999999999999999999999999999
Q ss_pred EECCCcCCCCCCCCCccEEEEEEEecCCcccccCCCeEEEEeeCHHHHhCCCEEEEeCCCCEEEEEeCCCCCCCcEEEEc
Q 012891 311 RVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGKVQVKIPKGVQPGQLLVLR 390 (454)
Q Consensus 311 ~~~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~Isl~eAllG~~~~i~tldG~~~v~ip~~~~~g~~~~l~ 390 (454)
+|+|+|++...+..+|||||+|+++||+.|+|+|+||++++.|+|.+||+|++++|+||||.++|+||+++++|++++|+
T Consensus 228 ~~~g~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~~ldG~i~v~ip~g~~~g~~~~i~ 307 (371)
T PRK10767 228 RLSGEGEAGERGGPAGDLYVQIHVKEHPIFERDGNDLYCEVPISFTTAALGGEIEVPTLDGRVKLKIPEGTQTGKLFRLR 307 (371)
T ss_pred EEecCccCCCCCCCCcCEEEEEEEeeCCCEEEecCCEEEEEEeCHHHHhCCCeEEEecCCCcEEEEeCCCCCCCCEEEEC
Confidence 99999999766778999999999999999999999999999999999999999999999999899999999999999999
Q ss_pred CCCcCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHHHHH
Q 012891 391 GKGLAKNGLFLDHGDQYVRFRVNFPTALNERQRAILEEFAEE 432 (454)
Q Consensus 391 g~Gmp~~~~~~~rGdL~v~~~V~~P~~ls~~q~~~l~~~~~~ 432 (454)
|+|||..+. ..+|||||+|+|.||+.|+++|+++|+++++.
T Consensus 308 g~G~p~~~~-~~~GDL~v~~~v~~P~~l~~~~~~ll~~l~~~ 348 (371)
T PRK10767 308 GKGVKSVRS-GARGDLYCQVVVETPVNLTKRQKELLEEFEES 348 (371)
T ss_pred CCCcCCCCC-CCCCCEEEEEEEECCCCCCHHHHHHHHHHHhh
Confidence 999997532 24799999999999999999999999999974
No 20
>PRK14282 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=7.3e-76 Score=598.13 Aligned_cols=343 Identities=36% Similarity=0.680 Sum_probs=294.0
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCC-hhHHHHHHHHHHHHHhhhhhhhhhhhcccccCCCCCccccC
Q 012891 81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNN-PSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSA 159 (454)
Q Consensus 81 ~~~~Y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~-~~a~~~f~~i~~Ay~vL~d~~~r~~yd~~~~~g~~~~~~~~ 159 (454)
..|||+||||+++||.+|||+|||+||++||||+|+.+ ++|+++|++|++||+||+||.+|+.||++|..+......+.
T Consensus 3 ~~d~y~~lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~g~~~~~~~~~~~ 82 (369)
T PRK14282 3 KKDYYEILGVSRNATQEEIKRAYKRLVKEWHPDRHPENRKEAEQKFKEIQEAYEVLSDPQKRAMYDRFGYVGEQPPYQET 82 (369)
T ss_pred CCChHHhcCCCCCCCHHHHHHHHHHHHHHHCCCCCccchhHHHHHHHHHHHHHHHhcChhhHHHHhhcCccccccccccC
Confidence 47999999999999999999999999999999999764 67899999999999999999999999999865543110000
Q ss_pred CCCCCccccCCCCcccccccccccCcc-cchhccccccc--------cccCCCCcEEEEEEEeeccccCcceeeeeceee
Q 012891 160 GDAEGFRYAGDAEGFRYAYQTHFSDSF-HKIFSEIFEDE--------TSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFV 230 (454)
Q Consensus 160 ~~~~~~~~~~~~~~f~~~~~~~f~~~f-~~~F~~~f~~~--------~~~~g~di~~~l~itlee~~~G~~k~v~~~~~~ 230 (454)
+..++| |.++|.. |++.| .++|+.+|++. .+.+++|+++.|.|||+|+|+|+++++.+.+.+
T Consensus 83 ~~~g~~--------~~~~~~~-~~~~~~~d~f~~~fgg~~~~~~~~~~~~~g~di~~~l~~slee~~~G~~~~i~~~r~~ 153 (369)
T PRK14282 83 ESGGGF--------FEDIFKD-FENIFNRDIFDIFFGERRTQEEQREYARRGEDIRYEIEVTLSDLINGAEIPVEYDRYE 153 (369)
T ss_pred CCCCcc--------ccccccc-ccccccchhhhHhhcccCCcccccCCCCCCCCeEEEEEEEHHHhcCCeEEEEEeeecc
Confidence 000011 1111111 11111 24566666521 134688999999999999999999999999999
Q ss_pred cccCCCCCCccCCCccccCCCccccceEEeC--------CccccCCCCCCceEEeeeecccccCCceeeceEEEEEEecC
Q 012891 231 PCDSCHGRGFPADAKTKICSTCRGIGRVTIP--------PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPA 302 (454)
Q Consensus 231 ~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~--------~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~~~V~Ip~ 302 (454)
.|+.|+|+|...+....+|+.|+|+|.+... ..+.+|+.|+|+|++++++|..|.|.|++.+.++++|.|||
T Consensus 154 ~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~Ip~ 233 (369)
T PRK14282 154 TCPHCGGTGVEPGSGYVTCPKCHGTGRIREERRSFFGVFVSERTCERCGGTGKIPGEYCHECGGSGRIRRRVRTTVKIPA 233 (369)
T ss_pred cCCCCCccCCCCCCCCcCCCCCCCcCEEEEEEEccCcceEEEEECCCCCCcceeCCCCCCCCCCceeEEEEEEEEEEeCC
Confidence 9999999999988888999999999987532 13679999999999999999999999999999999999999
Q ss_pred ccCCCCEEEECCCcCCCCCCCCCccEEEEEEEecCCcccccCCCeEEEEeeCHHHHhCCCEEEEeCCCCE-EEEEeCCCC
Q 012891 303 GVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGK-VQVKIPKGV 381 (454)
Q Consensus 303 G~~~G~~i~~~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~Isl~eAllG~~~~i~tldG~-~~v~ip~~~ 381 (454)
|+++|++|+|+|+|++...+..+|||||+|+++||+.|+|+|+||+++++|+|.||++|++++|+|+||+ ++|+||+++
T Consensus 234 G~~~G~~i~~~g~G~~~~~~~~~GDl~i~i~v~~h~~F~r~G~DL~~~~~Isl~eAl~G~~~~i~~ldG~~i~v~Ip~g~ 313 (369)
T PRK14282 234 GVEDGTVLRITGGGNAGYYGGPYGDLYVIVRVRPDPRFKRSGSDLIYDVTIDYLQAILGTTVEVPLPEGGTTMLKIPPGT 313 (369)
T ss_pred CCCCCCEEEEecccCCCCCCCCCCCEEEEEEEecCCcEEEecCCEEEEEEeCHHHHhCCCEEEEeCCCCcEEEEEeCCCc
Confidence 9999999999999999777788999999999999999999999999999999999999999999999996 799999999
Q ss_pred CCCcEEEEcCCCcCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHHHHHh
Q 012891 382 QPGQLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPTALNERQRAILEEFAEEE 433 (454)
Q Consensus 382 ~~g~~~~l~g~Gmp~~~~~~~rGdL~v~~~V~~P~~ls~~q~~~l~~~~~~~ 433 (454)
++|++++|+|+|||..+. ..+|||||+|+|.+|+.|+.+|+++|++|++.+
T Consensus 314 ~~g~~iri~GkG~p~~~~-~~~GDL~V~~~v~~P~~l~~~~~~ll~~l~~~~ 364 (369)
T PRK14282 314 QPETVFRLKGKGLPNMRY-GRRGDLIVNVHVEIPKRLSREERKLLKELAKKR 364 (369)
T ss_pred CCCCEEEECCCCCCCCCC-CCCCCEEEEEEEECCCCCCHHHHHHHHHHHHhc
Confidence 999999999999996522 247999999999999999999999999998754
No 21
>PRK14281 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=5.4e-76 Score=603.64 Aligned_cols=349 Identities=36% Similarity=0.664 Sum_probs=289.9
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHhhhhhhhhhhhcccccCCCCCccccCC
Q 012891 81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAG 160 (454)
Q Consensus 81 ~~~~Y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yd~~~~~g~~~~~~~~~ 160 (454)
..|||+||||+++|+.+|||+|||+||++||||+++++++|+++|++|++||+||+||.+|+.||++|..+....... +
T Consensus 2 ~~d~y~iLgv~~~a~~~eikkayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yD~~g~~~~~~~~~~-~ 80 (397)
T PRK14281 2 KRDYYEVLGVSRSADKDEIKKAYRKLALKYHPDKNPDNKEAEEHFKEVNEAYEVLSNDDKRRRYDQFGHAGVGSSAAS-G 80 (397)
T ss_pred CCChhhhcCCCCCCCHHHHHHHHHHHHHHHCCCcCCCchHHHHHHHHHHHHHHHhhhhhhhhhhhhccchhhcccccc-C
Confidence 369999999999999999999999999999999998778899999999999999999999999999987654321000 0
Q ss_pred CCCCcccc--CCCCcc---ccccccc--ccCcccchhccccccc-------cccCCCCcEEEEEEEeeccccCcceeeee
Q 012891 161 DAEGFRYA--GDAEGF---RYAYQTH--FSDSFHKIFSEIFEDE-------TSHFAPDIQVELVLSFAEAAKGCTKHVSF 226 (454)
Q Consensus 161 ~~~~~~~~--~~~~~f---~~~~~~~--f~~~f~~~F~~~f~~~-------~~~~g~di~~~l~itlee~~~G~~k~v~~ 226 (454)
...+|... +..+.| ..||+.. ++.....-|...|++. .+.+++|+++.|.|||+|+|+|+++++.+
T Consensus 81 ~~~~~~~~~~~~~d~f~~f~~~Fgg~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~di~~~l~vtLee~~~G~~~~i~~ 160 (397)
T PRK14281 81 GGPGYGGGGGDFNDIFSAFNDMFGGGARRGGGSPFGFEDVFGGGGRRRRASAGIPGTDLKIRLKLTLEEIAKGVEKTLKI 160 (397)
T ss_pred CCCCCCcCCCCHHHHHHHHHHHhCCCcccccccccccccccCCCcccccccCCCCCCCEEEEEEeEHHHHhCCeEEEEEE
Confidence 00111000 001112 1223210 0000000011111111 12368899999999999999999999999
Q ss_pred ceeecccCCCCCCccCCCccccCCCccccceEEeC--------CccccCCCCCCceEEeeeecccccCCceeeceEEEEE
Q 012891 227 DAFVPCDSCHGRGFPADAKTKICSTCRGIGRVTIP--------PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKV 298 (454)
Q Consensus 227 ~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~--------~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~~~V 298 (454)
++.+.|+.|.|+|...+ ...+|+.|+|.|.++.. ..+.+|+.|+|+|.+++++|..|.|.|++...++++|
T Consensus 161 ~r~~~C~~C~G~G~~~~-~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~~~V 239 (397)
T PRK14281 161 KKQVPCKECNGTGSKTG-ATETCPTCHGSGEVRQASKTMFGQFVNITACPTCGGEGRVVKDRCPACYGEGIKQGEVTVKV 239 (397)
T ss_pred EeeecCCCCCCcccCCC-CCccCCCCCCCcEEEEEEecccceEEEEEecCCCcceeeeeCCCCCCCCCCccEecceEEEE
Confidence 99999999999999876 57899999999987542 1266899999999999999999999999999999999
Q ss_pred EecCccCCCCEEEECCCcCCCCCCCCCccEEEEEEEecCCcccccCCCeEEEEeeCHHHHhCCCEEEEeCCCCEEEEEeC
Q 012891 299 TIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGKVQVKIP 378 (454)
Q Consensus 299 ~Ip~G~~~G~~i~~~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~Isl~eAllG~~~~i~tldG~~~v~ip 378 (454)
.||||+++|++|+|+|+|++.+.+..+|||||+|++++|+.|+|+|+||+++++|+|.|||+|++++|+||||+++|+||
T Consensus 240 ~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~i~i~~~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tldg~i~v~ip 319 (397)
T PRK14281 240 TVPAGVQDGNYLTLRGQGNAGPRGGAPGDLIVVIEEKPHELFVRNGDDVIYNLAVSYPDLVLGTKVEVPTLDGAVKLTIP 319 (397)
T ss_pred ecCCCCCCCCEEEEecccccCCCCCCCCcEEEEEEEcCCCCeEEecCCEEEEEEecHHHHhcCCeEEeecCCccEEEEeC
Confidence 99999999999999999999876778999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCcEEEEcCCCcCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHHHHH
Q 012891 379 KGVQPGQLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPTALNERQRAILEEFAEE 432 (454)
Q Consensus 379 ~~~~~g~~~~l~g~Gmp~~~~~~~rGdL~v~~~V~~P~~ls~~q~~~l~~~~~~ 432 (454)
+++++|++++|+|+|||.... ..+|||||+|+|+||+.||++|+++|++|+..
T Consensus 320 ~g~~~G~~~ri~g~G~P~~~~-~~~GDL~V~~~V~~P~~Ls~~qk~~l~~l~~~ 372 (397)
T PRK14281 320 AGTQPETMLRIPGKGIGHLRG-SGRGDQYVRVNVFVPKEVSHQDKELLKELKKS 372 (397)
T ss_pred CccCCCcEEEEcCCCCCCCCC-CCCCCEEEEEEEEcCCCCCHHHHHHHHHHHhh
Confidence 999999999999999997532 25799999999999999999999999999874
No 22
>PRK14300 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=1.3e-74 Score=589.15 Aligned_cols=339 Identities=38% Similarity=0.718 Sum_probs=291.3
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHhhhhhhhhhhhcccccCCCCCccccCCC
Q 012891 82 RDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAGD 161 (454)
Q Consensus 82 ~~~Y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yd~~~~~g~~~~~~~~~~ 161 (454)
.|||+||||+++||.+|||+|||+||++||||+++ ++.++++|++|++||+||+||.+|+.||++|..+..... ..++
T Consensus 3 ~~~y~iLgv~~~as~~eik~ayr~la~~~HPD~~~-~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~~~~~-~~~~ 80 (372)
T PRK14300 3 QDYYQILGVSKTASQADLKKAYLKLAKQYHPDTTD-AKDAEKKFKEINAAYDVLKDEQKRAAYDRFGHDAFQNQQ-SRGG 80 (372)
T ss_pred CChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCC-CcCHHHHHHHHHHHHHHhhhHhHhhHHHhcccccccccc-ccCC
Confidence 69999999999999999999999999999999997 467889999999999999999999999999865543110 0000
Q ss_pred CCCccccCCCCcccccccccccCcccchhccccccc-------cccCCCCcEEEEEEEeeccccCcceeeeeceeecccC
Q 012891 162 AEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFEDE-------TSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDS 234 (454)
Q Consensus 162 ~~~~~~~~~~~~f~~~~~~~f~~~f~~~F~~~f~~~-------~~~~g~di~~~l~itlee~~~G~~k~v~~~~~~~C~~ 234 (454)
.+++ ..|. ..|++.|.++|+.+|++. .+.+++|+++.|.|||+|+|+|+++++.+.+.+.|+.
T Consensus 81 ~g~~------~~~~----~~~~~~f~~~f~~~~gg~~~~~~~~~~~~g~di~~~l~~sLee~~~G~~k~i~~~r~~~C~~ 150 (372)
T PRK14300 81 GGNH------GGFH----PDINDIFGDFFSDFMGGSRRSRPTSSKVRGSDLKYNLTINLEEAFHGIEKNISFSSEVKCDT 150 (372)
T ss_pred CCCC------Cccc----cchhhhHHHHHHhhcCCCCCCCCCcCCCCCCCeeEEEEEEHHHHhCCceEEEEeeeccccCC
Confidence 0000 0010 001122334444433321 1146889999999999999999999999999999999
Q ss_pred CCCCCccCCCccccCCCccccceEEeC----CccccCCCCCCceEEeeeecccccCCceeeceEEEEEEecCccCCCCEE
Q 012891 235 CHGRGFPADAKTKICSTCRGIGRVTIP----PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVDSGDTI 310 (454)
Q Consensus 235 C~G~G~~~~~~~~~C~~C~G~G~~~~~----~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~~~V~Ip~G~~~G~~i 310 (454)
|.|+|...+....+|+.|+|+|.+... .+..+|+.|+|+|+++.++|..|+|.|++.+.++++|.||||+++|++|
T Consensus 151 C~G~g~~~~~~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~~i 230 (372)
T PRK14300 151 CHGSGSEKGETVTTCDACSGVGATRMQQGFFTIEQACHKCQGNGQIIKNPCKKCHGMGRYHKQRNLSVNIPAGVENGTRI 230 (372)
T ss_pred CCCcccCCCCCCccCCCccCeEEEEEeeceEEEEEeCCCCCccceEeCCCCCCCCCceEEEeeEEEEEEECCCCCCCcEE
Confidence 999999988888999999999987543 2467999999999999999999999999999999999999999999999
Q ss_pred EECCCcCCCCCCCCCccEEEEEEEecCCcccccCCCeEEEEeeCHHHHhCCCEEEEeCCCC-EEEEEeCCCCCCCcEEEE
Q 012891 311 RVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSG-KVQVKIPKGVQPGQLLVL 389 (454)
Q Consensus 311 ~~~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~Isl~eAllG~~~~i~tldG-~~~v~ip~~~~~g~~~~l 389 (454)
+|+|+|++...+..+|||+|+|+++||+.|+|+|+||+++++|+|.+|++|+++.|+|||| .++|+||+++++|++++|
T Consensus 231 ~l~g~G~~~~~~~~~GDL~v~i~v~~h~~f~R~G~Dl~~~~~Isl~~Al~G~~~~i~~ldg~~i~v~Ip~g~~~g~~iri 310 (372)
T PRK14300 231 RHTGEGEAGIRGGNSGDLYVDIAIKPHDIYKVDGANLHCKLPISFVNAALGGEIEVPVIEGGKVNLTIPAGTQNGDQLRL 310 (372)
T ss_pred EEeccccCCCCCCCCCCEEEEEEECCCCCeEEecCCEEEEEecCHHHHhCCCEEEEecCCCCEEEEEECCccCCCcEEEE
Confidence 9999999876678899999999999999999999999999999999999999999999998 589999999999999999
Q ss_pred cCCCcCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHHHHHh
Q 012891 390 RGKGLAKNGLFLDHGDQYVRFRVNFPTALNERQRAILEEFAEEE 433 (454)
Q Consensus 390 ~g~Gmp~~~~~~~rGdL~v~~~V~~P~~ls~~q~~~l~~~~~~~ 433 (454)
+|+|||..+. ..+|||||+|+|+||++||++|+++|++|++..
T Consensus 311 ~g~G~p~~~~-~~~GDL~V~~~v~~P~~ls~~qk~~l~~l~~~~ 353 (372)
T PRK14300 311 RSKGMSKMRS-TIRGDMLTHIHVEVPKNLSKRQRELLEEFKKES 353 (372)
T ss_pred CCCCCCCCCC-CCCCCEEEEEEEECCCCCCHHHHHHHHHHHhhc
Confidence 9999997532 247999999999999999999999999999753
No 23
>PRK14291 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=4.3e-74 Score=587.25 Aligned_cols=347 Identities=37% Similarity=0.691 Sum_probs=289.9
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHhhhhhhhhhhhcccccCCCCCccccCC
Q 012891 81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAG 160 (454)
Q Consensus 81 ~~~~Y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yd~~~~~g~~~~~~~~~ 160 (454)
..|||+||||+++||.+|||+|||+||++||||+|++ ++|+++|++|++||+||+||.+|++||++|..+.........
T Consensus 2 ~~d~Y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~-~~~~~~f~~i~~Ay~vLsd~~kR~~YD~~g~~~~~~~~~~~~ 80 (382)
T PRK14291 2 KKDYYEILGVSRNATQEEIKKAYRRLARKYHPDFNKN-PEAEEKFKEINEAYQVLSDPEKRKLYDQFGHAAFSGSGQQQQ 80 (382)
T ss_pred CCCHHHhhCCCCCCCHHHHHHHHHHHHHHHCCCCCCC-ccHHHHHHHHHHHHHHhcCHHHHHHHhhhcccccccccCccc
Confidence 4699999999999999999999999999999999985 778999999999999999999999999998765432110000
Q ss_pred CCCCcc---ccCCCCcccccccccccCcccchhccccc--c-----ccccCCCCcEEEEEEEeeccccCcceeeeeceee
Q 012891 161 DAEGFR---YAGDAEGFRYAYQTHFSDSFHKIFSEIFE--D-----ETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFV 230 (454)
Q Consensus 161 ~~~~~~---~~~~~~~f~~~~~~~f~~~f~~~F~~~f~--~-----~~~~~g~di~~~l~itlee~~~G~~k~v~~~~~~ 230 (454)
...+|. ..+..+.|.+||+. |+ |..+|....+ . ..+.+++|+.+.|.|||+|+|+|+++++.+.+.+
T Consensus 81 ~~~~~~~~~~~~~~d~f~~~f~~-fg--~~~~fg~~~~~~~~~~~~~~~~~g~di~~~l~vsLee~~~G~~~~i~~~r~~ 157 (382)
T PRK14291 81 GQEGFSDFGGGNIEDILEDVFDI-FG--FGDIFGRRRATRERRKTYQRPVKGEDIYQTVEISLEEAYTGTTVSLEVPRYV 157 (382)
T ss_pred cccccccccCCCHHHHHHHHHHh-cc--ccccccccccccccccccccccCCCCEEEEEEEEHHHhhCCEEEEEEEeeec
Confidence 001111 00011222222211 10 1111211000 0 1133688999999999999999999999999999
Q ss_pred cccCCCCCCccCCCccccCCCccccceEEeC----CccccCCCCCCceEEeeeecccccCCceeeceEEEEEEecCccCC
Q 012891 231 PCDSCHGRGFPADAKTKICSTCRGIGRVTIP----PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVDS 306 (454)
Q Consensus 231 ~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~----~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~~~V~Ip~G~~~ 306 (454)
.|..|+|+|...+....+|+.|+|+|.++.. .++.+|+.|+|+|. ++++|..|+|.|++.+.++++|.||||+++
T Consensus 158 ~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~-~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~~ 236 (382)
T PRK14291 158 PCEACGGTGYDPGSGEKVCPTCGGSGEIYQRGGFFRISQTCPTCGGEGV-LREPCSKCNGRGLVIKKETIKVRIPPGVDN 236 (382)
T ss_pred cCCCCccccCCCCCCCccCCCCCCceEEEEecceEEEEecCCCCCCceE-EccCCCCCCCCceEEeeeEEEEEeCCCCCC
Confidence 9999999999988888999999999987543 24779999999994 789999999999999999999999999999
Q ss_pred CCEEEECCCcCCCCCCCCCccEEEEEEEecCCcccccCCCeEEEEeeCHHHHhCCCEEEEeCCCCE-EEEEeCCCCCCCc
Q 012891 307 GDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGK-VQVKIPKGVQPGQ 385 (454)
Q Consensus 307 G~~i~~~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~Isl~eAllG~~~~i~tldG~-~~v~ip~~~~~g~ 385 (454)
|++|+|+|+|+++..++.+|||||+|+++||+.|+|+|+||++++.|+|.||++|+++.|+|+||+ ++|+||+++++|+
T Consensus 237 G~~i~~~g~G~~~~~g~~~GDL~v~i~~~~h~~F~r~G~DL~~~~~Isl~eAl~G~~~~i~~ldG~~l~V~Ip~g~~~G~ 316 (382)
T PRK14291 237 GSKLRVPGKGHAGRFGGPPGDLYIIVKVKPHPLFERRGDNLYLDVNITVAEAVLGTELEVPLLDGKKEKVKIPPGTKEGD 316 (382)
T ss_pred CCEEEEecCcCCCCCCCCCccEEEEEEEccCCCeeeecCCeEEEEEeeHHHHhCCCEEEEecCCCCEEEEEECCccCCCC
Confidence 999999999999877888999999999999999999999999999999999999999999999996 7999999999999
Q ss_pred EEEEcCCCcCCCCCCCCCCcEEEEEEEECCC--CCC------HHHHHHHHHHHHHh
Q 012891 386 LLVLRGKGLAKNGLFLDHGDQYVRFRVNFPT--ALN------ERQRAILEEFAEEE 433 (454)
Q Consensus 386 ~~~l~g~Gmp~~~~~~~rGdL~v~~~V~~P~--~ls------~~q~~~l~~~~~~~ 433 (454)
+++|+|+|||..+. ..+|||||+|+|+||+ .|| ++|+++|++|....
T Consensus 317 ~i~i~G~G~p~~~~-~~~GDL~V~~~V~~P~~~~ls~~~~~~~~~~~~~~~l~~~~ 371 (382)
T PRK14291 317 KIRVPGKGMPRLKG-SGYGDLVVRVHIDVPKISMLSKLMGDGKKAKKLLKELDKLL 371 (382)
T ss_pred EEEECCCCCCCCCC-CCCCCEEEEEEEEeCCCcCcCccccCCHHHHHHHHHHHhhc
Confidence 99999999997643 2479999999999998 599 99999999998765
No 24
>PRK14283 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=6.6e-74 Score=585.52 Aligned_cols=342 Identities=38% Similarity=0.679 Sum_probs=292.9
Q ss_pred CCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHhhhhhhhhhhhcccccCCCCCccccC
Q 012891 80 SKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSA 159 (454)
Q Consensus 80 ~~~~~Y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yd~~~~~g~~~~~~~~ 159 (454)
...|||++|||+++||.+|||+|||+||++||||+|++ ++|+++|++|++||+||+||.+|++||++|+.|.... +.
T Consensus 3 ~~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~-~~a~~~f~~i~~Ay~~Lsd~~kR~~YD~~G~~g~~~~--~~ 79 (378)
T PRK14283 3 EKRDYYEVLGVDRNADKKEIKKAYRKLARKYHPDVSEE-EGAEEKFKEISEAYAVLSDDEKRQRYDQFGHAGMDGF--SQ 79 (378)
T ss_pred CcCChHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCC-ccHHHHHHHHHHHHHHhchhHHHHHHhhhcccccccc--cc
Confidence 35799999999999999999999999999999999984 7899999999999999999999999999987654310 00
Q ss_pred CCCCCccccCCCCcccccccccccCcccchhccc-ccc---ccccCCCCcEEEEEEEeeccccCcceeeeeceeecccCC
Q 012891 160 GDAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEI-FED---ETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSC 235 (454)
Q Consensus 160 ~~~~~~~~~~~~~~f~~~~~~~f~~~f~~~F~~~-f~~---~~~~~g~di~~~l~itlee~~~G~~k~v~~~~~~~C~~C 235 (454)
. +.|...+..+.|..|+ .+|.++|+.+ |++ ..+.++.|++++|.|||+|+|+|+++++.+.+.+.|+.|
T Consensus 80 ~--~~~~~~~~~~~~~~~~-----~~~~~~f~~~~fgg~~~~~~~kg~di~~~l~vsLed~~~G~~~~i~~~r~~~C~~C 152 (378)
T PRK14283 80 E--DIFNNINFEDIFQGFG-----FGIGNIFDMFGFGGGSRHGPQRGADIYTEVEITLEEAASGVEKDIKVRHTKKCPVC 152 (378)
T ss_pred c--ccccccCccccccccc-----cchhhhccccccCCCCCCCccCCCCeEEEeeeeHHHHhCCcceEEEeeeeccCCCC
Confidence 0 0011000011111111 1233444443 432 123478899999999999999999999999999999999
Q ss_pred CCCCccCCCccccCCCccccceEEeC--------CccccCCCCCCceEEeeeecccccCCceeeceEEEEEEecCccCCC
Q 012891 236 HGRGFPADAKTKICSTCRGIGRVTIP--------PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVDSG 307 (454)
Q Consensus 236 ~G~G~~~~~~~~~C~~C~G~G~~~~~--------~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~~~V~Ip~G~~~G 307 (454)
.|+|...+.....|+.|+|.|.+... ....+|+.|.|+|+.++++|..|.|.|++.+.++++|.||||+++|
T Consensus 153 ~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~IppG~~~G 232 (378)
T PRK14283 153 NGSRAEPGSEVKTCPTCGGTGQVKQVRNTILGQMMNVTTCPDCQGEGKIVEKPCSNCHGKGVVRETKTISVKIPAGVETG 232 (378)
T ss_pred CccccCCCCCCccCCCcCCccEEEEEEeccCceEEEEEECCCCCccceecCCCCCCCCCceeeccceeEEEEECCCCCCC
Confidence 99999888888999999999987532 1267899999999999999999999999999999999999999999
Q ss_pred CEEEECCCcCCCCCCCCCccEEEEEEEecCCcccccCCCeEEEEeeCHHHHhCCCEEEEeCCCCEEEEEeCCCCCCCcEE
Q 012891 308 DTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGKVQVKIPKGVQPGQLL 387 (454)
Q Consensus 308 ~~i~~~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~Isl~eAllG~~~~i~tldG~~~v~ip~~~~~g~~~ 387 (454)
++++|+|+|++...+..+|||||+|+|++|+.|+|+|+||++++.|+|.+|++|++++|+||||.+.|.||+++++|+++
T Consensus 233 ~~i~l~g~G~~~~~~~~~GDLiv~i~v~~~~~f~r~G~DL~~~~~Isl~eAl~G~~~~i~tldG~i~v~ip~g~~~g~~~ 312 (378)
T PRK14283 233 SRLRVSGEGEMGDRGGEPGDLYVVIKVKPHKIFRREGANLYYEKPISFVQAALGDTVDVPTIDGPVELKIPAGTQSGTTF 312 (378)
T ss_pred cEEEEeccccCCCCCCCCccEEEEEEEEcCCCEEEecCCEEEEEecCHHHHhcCCeEEEEcCCceEEEEeCCCCCCCCEE
Confidence 99999999998766678999999999999999999999999999999999999999999999998899999999999999
Q ss_pred EEcCCCcCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHHHHH
Q 012891 388 VLRGKGLAKNGLFLDHGDQYVRFRVNFPTALNERQRAILEEFAEE 432 (454)
Q Consensus 388 ~l~g~Gmp~~~~~~~rGdL~v~~~V~~P~~ls~~q~~~l~~~~~~ 432 (454)
+|+|+|||..+. ..+|||||+|+|+||+.||++|+++|++|++.
T Consensus 313 ri~g~G~p~~~~-~~~GdL~v~~~v~~P~~l~~~q~~ll~~~~~~ 356 (378)
T PRK14283 313 RLKGHGMPSLRW-SGKGNLYVKVKVVVPKKLSPKQKELLREFASI 356 (378)
T ss_pred EECCCCCCCCCC-CCCCCEEEEEEEEeCCCCCHHHHHHHHHHHhh
Confidence 999999997532 24799999999999999999999999999864
No 25
>TIGR02349 DnaJ_bact chaperone protein DnaJ. This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.
Probab=100.00 E-value=1.1e-73 Score=580.45 Aligned_cols=336 Identities=44% Similarity=0.788 Sum_probs=291.2
Q ss_pred CcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHhhhhhhhhhhhcccccCCCCCccccCCCC
Q 012891 83 DPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAGDA 162 (454)
Q Consensus 83 ~~Y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yd~~~~~g~~~~~~~~~~~ 162 (454)
|||+||||+++|+.+|||+|||+||++||||+++ +++++++|++|++||+||+||.+|+.||++|..+......+ ..
T Consensus 1 d~y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~-~~~~~~~f~~i~~Ay~vL~d~~~R~~yd~~g~~~~~~~~~~--~~ 77 (354)
T TIGR02349 1 DYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNK-DKEAEEKFKEINEAYEVLSDPEKRAQYDQFGHAGFNGGGGG--GG 77 (354)
T ss_pred ChHHhCCCCCCCCHHHHHHHHHHHHHHHCCCCCC-CccHHHHHHHHHHHHHHhhChHHHHhhhhcccccccccCcC--CC
Confidence 7999999999999999999999999999999997 57788999999999999999999999999987654321100 00
Q ss_pred CCccccCCCCcccccccccccCcccchhcccccc---------ccccCCCCcEEEEEEEeeccccCcceeeeeceeeccc
Q 012891 163 EGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFED---------ETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCD 233 (454)
Q Consensus 163 ~~~~~~~~~~~f~~~~~~~f~~~f~~~F~~~f~~---------~~~~~g~di~~~l~itlee~~~G~~k~v~~~~~~~C~ 233 (454)
.+|. +| ....| ++|.++|+.+|++ ....+++|+++.|.|||+|+|+|+++++.+++.+.|+
T Consensus 78 ~~~~------~~---~~~~~-~~~~~~f~~~fg~~~g~~~~~~~~~~~~~d~~~~l~vsLee~~~G~~~~i~~~r~~~C~ 147 (354)
T TIGR02349 78 GGFN------GF---DIGFF-GDFGDIFGDFFGGGGGSGRRRRSGPRRGEDLRYDLELTFEEAVFGVEKEIEIPRKESCE 147 (354)
T ss_pred CCcC------Cc---cccCc-CchhhhHHHHhccCcccCccccCCCCCCCCeEEEEEEEHHHHhCCeeEEEEeecCCcCC
Confidence 0110 00 00011 1244556665552 1234688999999999999999999999999999999
Q ss_pred CCCCCCccCCCccccCCCccccceEEeC--------CccccCCCCCCceEEeeeecccccCCceeeceEEEEEEecCccC
Q 012891 234 SCHGRGFPADAKTKICSTCRGIGRVTIP--------PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVD 305 (454)
Q Consensus 234 ~C~G~G~~~~~~~~~C~~C~G~G~~~~~--------~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~~~V~Ip~G~~ 305 (454)
.|+|+|.........|+.|+|+|.+... ..+.+|+.|+|+|++++.+|..|.|.|++.+.++++|.||||++
T Consensus 148 ~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~ 227 (354)
T TIGR02349 148 TCHGTGAKPGTDPKTCPTCGGTGQVRRQQGTPFGFFQQQQTCPTCGGEGKIIKEPCSTCKGKGRVKERKTITVKIPAGVD 227 (354)
T ss_pred CCCCCCCCCCCCCccCCCCCCeeEEEEEEeccCCceEEEEecCCCCCcceecCCCCCCCCCCcEecccceEEEEECCCCC
Confidence 9999999888888999999999987532 12669999999999999999999999999999999999999999
Q ss_pred CCCEEEECCCcCCCCCCCCCccEEEEEEEecCCcccccCCCeEEEEeeCHHHHhCCCEEEEeCCCCEEEEEeCCCCCCCc
Q 012891 306 SGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGKVQVKIPKGVQPGQ 385 (454)
Q Consensus 306 ~G~~i~~~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~Isl~eAllG~~~~i~tldG~~~v~ip~~~~~g~ 385 (454)
+|++|+|+|+|++...+..+|||||+|++++|+.|+|+|+||++++.|+|.|||+|+++.|+||||.++|.||+++++|+
T Consensus 228 ~G~~i~~~g~G~~~~~~~~~GDl~v~i~v~~h~~f~r~g~DL~~~~~isl~eAl~G~~~~i~~ldG~i~v~ip~g~~~g~ 307 (354)
T TIGR02349 228 TGQRLRVSGKGNAGENGGPNGDLYVVIRVKPHKIFERDGNDLYIEVPISFTQAILGGEIEVPTLDGDVKLKIPAGTQSGT 307 (354)
T ss_pred CCCEEEEecCccCCCCCCCCCCEEEEEEEecCcceEEecCCEEEEEEeCHHHHhCCCeEEEecCCceEEEEECCcccCCc
Confidence 99999999999987667789999999999999999999999999999999999999999999999998999999999999
Q ss_pred EEEEcCCCcCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHHHHH
Q 012891 386 LLVLRGKGLAKNGLFLDHGDQYVRFRVNFPTALNERQRAILEEFAEE 432 (454)
Q Consensus 386 ~~~l~g~Gmp~~~~~~~rGdL~v~~~V~~P~~ls~~q~~~l~~~~~~ 432 (454)
+++|+|+|||..+. ..+|||||+|+|+||+.|+++|+++|++++..
T Consensus 308 ~~~i~g~G~p~~~~-~~~GDL~i~~~v~~P~~l~~~~~~~l~~~~~~ 353 (354)
T TIGR02349 308 VFRLKGKGVPRLRG-NGRGDLLVTVKVETPKNLSKEQKELLEELAEA 353 (354)
T ss_pred EEEECCCCcCCCCC-CCCCCEEEEEEEECCCCCCHHHHHHHHHHHhh
Confidence 99999999997643 25799999999999999999999999999853
No 26
>PRK14290 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=1.9e-73 Score=579.70 Aligned_cols=347 Identities=35% Similarity=0.646 Sum_probs=288.1
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCh-hHHHHHHHHHHHHHhhhhhhhhhhhcccccCCCCCccccCC
Q 012891 82 RDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNP-SAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAG 160 (454)
Q Consensus 82 ~~~Y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~-~a~~~f~~i~~Ay~vL~d~~~r~~yd~~~~~g~~~~~~~~~ 160 (454)
.|||+||||+++||.+|||+|||+||++||||+++.++ +|+++|++|++||+||+||.+|++||++|..+... +++
T Consensus 3 ~d~y~vLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~G~~~~~~---~~~ 79 (365)
T PRK14290 3 KDYYKILGVDRNASQEDIKKAFRELAKKWHPDLHPGNKAEAEEKFKEISEAYEVLSDPQKRRQYDQTGTVDFGA---GGS 79 (365)
T ss_pred CChhhhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchhHHHHHHHHHHHHHHHhcChhhhhhhcccCCccccc---CCC
Confidence 69999999999999999999999999999999998664 78999999999999999999999999998765421 000
Q ss_pred CC--CCcc-ccCCCCcccccccccccCcccchhccc-cccccccCCCCcEEEEEEEeeccccCcceeeeeceeecccCCC
Q 012891 161 DA--EGFR-YAGDAEGFRYAYQTHFSDSFHKIFSEI-FEDETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCH 236 (454)
Q Consensus 161 ~~--~~~~-~~~~~~~f~~~~~~~f~~~f~~~F~~~-f~~~~~~~g~di~~~l~itlee~~~G~~k~v~~~~~~~C~~C~ 236 (454)
.+ ++|. +.+..+.|..||+..|+. +.|+.. .......+++|+++.|.|||+|+|.|+++++.+.+.+.|+.|.
T Consensus 80 ~~~~~~~~~~~~~~d~f~~~fg~~~~~---~~~~~~~~~~~~~~~~~di~~~l~lsLee~~~G~~~~i~~~r~~~C~~C~ 156 (365)
T PRK14290 80 NFNWDNFTHFSDINDIFNQIFGGNFGS---DFFSGFGNQQSTRNIDLDIYTNLDISLEDAYYGTEKRIKYRRNAMCPDCS 156 (365)
T ss_pred CccccccccccchhHHHHHHhcCcccc---ccccccccccCCCCCCCCEEEEEEecHHHhcCCEEEEEEeeecccCCCCc
Confidence 00 0110 000112233232211000 000000 0001112378999999999999999999999999999999999
Q ss_pred CCCccCCCccccCCCccccceEEeC--------CccccCCCCCCceEEeeeecccccCCceeeceEEEEEEecCccCCCC
Q 012891 237 GRGFPADAKTKICSTCRGIGRVTIP--------PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVDSGD 308 (454)
Q Consensus 237 G~G~~~~~~~~~C~~C~G~G~~~~~--------~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~~~V~Ip~G~~~G~ 308 (454)
|+|.... ...+|+.|+|.|.+++. +...+|+.|+|.|++++.+|..|+|.|++.+.++++|.||||+.+|+
T Consensus 157 G~g~~~~-~~~~C~~C~G~G~~~~~~~~g~~~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~ 235 (365)
T PRK14290 157 GTGAKNG-KLITCPTCHGTGQQRIVRGQGFFRMVTVTTCRTCGGRGRIPEEKCPRCNGTGTVVVNEDISVKIPKGATDNL 235 (365)
T ss_pred cccCCCC-CCccCCCCCCcCEEEEEeccCeEEEEEEEeCCCCCCceeEccCCCCCCCCceeEEEeeEEEEEECCCCCCCc
Confidence 9998775 57899999999986542 12578999999999999999999999999999999999999999999
Q ss_pred EEEECCCcCCCCCCCCCccEEEEEEEecCCcccccCCCeEEEEeeCHHHHhCCCEEEEeCCCCEEEEEeCCCCCCCcEEE
Q 012891 309 TIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGKVQVKIPKGVQPGQLLV 388 (454)
Q Consensus 309 ~i~~~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~Isl~eAllG~~~~i~tldG~~~v~ip~~~~~g~~~~ 388 (454)
+|+|+|+|+. .++.+|||||+|++++|+.|+|+|+||+++++|+|.+|++|+++.|+|++|.++|+||+++++|++++
T Consensus 236 ~i~~~g~G~~--~~~~~GDL~v~v~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~I~~~~g~i~V~Ip~g~~~g~~ir 313 (365)
T PRK14290 236 RLRVKGKGQS--YGGRTGDLYVVLRVNNDPNIQRINDDLYVDQKINFPQAALGGEIEIKLFREKYNLKIPEGTQPGEVLK 313 (365)
T ss_pred EEEEccccCC--CCCCCCCEEEEEEEcCCCCEEEecCCEEEEEEeCHHHHhCCCEEEEEcCCceEEEEECCccCCCcEEE
Confidence 9999999986 47789999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EcCCCcCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHHHHHhcccCC
Q 012891 389 LRGKGLAKNGLFLDHGDQYVRFRVNFPTALNERQRAILEEFAEEEINNEN 438 (454)
Q Consensus 389 l~g~Gmp~~~~~~~rGdL~v~~~V~~P~~ls~~q~~~l~~~~~~~~~~~~ 438 (454)
|+|+|||..+. ..+|||||+|+|.+|+.|+++|+++|++|+..+-++++
T Consensus 314 i~g~G~p~~~~-~~~GDL~V~~~V~~P~~l~~~~~~ll~~~~~~~~~~~~ 362 (365)
T PRK14290 314 IKGAGMPHLNG-HGSGDLLVRINVEVPKRLTSKQKELIREFFDIKENHKS 362 (365)
T ss_pred ECCCCCCCCCC-CCCCCEEEEEEEECCCCCCHHHHHHHHHHHHhhhcccc
Confidence 99999997543 24799999999999999999999999999976544443
No 27
>PRK14289 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=5.2e-73 Score=580.76 Aligned_cols=349 Identities=36% Similarity=0.636 Sum_probs=292.6
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHhhhhhhhhhhhcccccCCCCCccccCC
Q 012891 81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAG 160 (454)
Q Consensus 81 ~~~~Y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yd~~~~~g~~~~~~~~~ 160 (454)
..|||++|||+++||.+|||+|||+||++||||+++++++|+++|++|++||++|+||.+|++||++|..+.... .+.+
T Consensus 4 ~~~~y~~Lgv~~~a~~~eik~ayr~la~~~HpD~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~G~~~~~~~-~~~~ 82 (386)
T PRK14289 4 KRDYYEVLGVSKTATVDEIKKAYRKKAIQYHPDKNPGDKEAEEKFKEAAEAYDVLSDPDKRSRYDQFGHAGVGGA-AGGG 82 (386)
T ss_pred cCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCChHHHHHHHHHHHHHHHhcCHHHHHHHHHhcccccccC-CCCC
Confidence 579999999999999999999999999999999999888899999999999999999999999999987653211 0001
Q ss_pred CCCCccccCCCCccccc---ccccccCcccch--hccccccccccCCCCcEEEEEEEeeccccCcceeeeeceeecccCC
Q 012891 161 DAEGFRYAGDAEGFRYA---YQTHFSDSFHKI--FSEIFEDETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSC 235 (454)
Q Consensus 161 ~~~~~~~~~~~~~f~~~---~~~~f~~~f~~~--F~~~f~~~~~~~g~di~~~l~itlee~~~G~~k~v~~~~~~~C~~C 235 (454)
++.+.. .+..+.|..| |+..|+ ++... |..........++.|+++.|.|||+|+|+|+++++.+.+.+.|+.|
T Consensus 83 ~~~~~~-~~~~~~f~~f~~~fg~~~g-g~~~~~~~~~~~~~~~~~~g~di~~~l~vsLee~~~G~~~~i~~~r~~~C~~C 160 (386)
T PRK14289 83 GFSGEG-MSMEDIFSMFGDIFGGHGG-GFGGFGGFGGGGSQQRVFRGSDLRVKVKLNLKEISTGVEKKFKVKKYVPCSHC 160 (386)
T ss_pred CCCCCC-cChhhhhHHhhhhhccccc-CcccccccccccccCCCCCCCCeEEEEEEEHHHhhCCeEEEEEEEeecccCCC
Confidence 111000 0011122111 221110 00000 0000000123468899999999999999999999999999999999
Q ss_pred CCCCccCCCccccCCCccccceEEeC--------CccccCCCCCCceEEeeeecccccCCceeeceEEEEEEecCccCCC
Q 012891 236 HGRGFPADAKTKICSTCRGIGRVTIP--------PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVDSG 307 (454)
Q Consensus 236 ~G~G~~~~~~~~~C~~C~G~G~~~~~--------~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~~~V~Ip~G~~~G 307 (454)
.|+|.........|+.|+|.|.++.. .+..+|+.|+|+|++++..|..|.|.|++.+.++++|.||||+++|
T Consensus 161 ~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G 240 (386)
T PRK14289 161 HGTGAEGNNGSETCPTCKGSGSVTRVQNTILGTMQTQSTCPTCNGEGKIIKKKCKKCGGEGIVYGEEVITVKIPAGVAEG 240 (386)
T ss_pred CCCCCCCCCCCCcCCCCcCeEEEEEEEecccceEEEEEecCCCCccccccCcCCCCCCCCcEEeeeEEEEEEeCCCCCCC
Confidence 99999988888999999999987643 1367899999999999999999999999999999999999999999
Q ss_pred CEEEECCCcCCCCCCCCCccEEEEEEEecCCcccccCCCeEEEEeeCHHHHhCCCEEEEeCCCCEEEEEeCCCCCCCcEE
Q 012891 308 DTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGKVQVKIPKGVQPGQLL 387 (454)
Q Consensus 308 ~~i~~~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~Isl~eAllG~~~~i~tldG~~~v~ip~~~~~g~~~ 387 (454)
++|+|+|+|++...+..+|||+|+|++++|+.|+|+|+||++++.|+|.+|++|+++.|+|+||+++|+||+++++|+++
T Consensus 241 ~~i~l~g~G~~~~~~~~~GDL~v~v~v~~~~~f~r~g~DL~~~~~Isl~eAl~G~~~~i~~ldg~i~v~ip~g~~~g~~~ 320 (386)
T PRK14289 241 MQLSMNGKGNAGKHGGVNGDLLVVIEEEPHPELIRDENDLIYNLLLSVPTAALGGAVEVPTIDGKAKVKIEAGTQPGKVL 320 (386)
T ss_pred CEEEEeccccCCCCCCCCccEEEEEEEecCCcccccccceeEEeccCHHHHhCCCeEEeecCCceEEEEECCccCCCcEE
Confidence 99999999998766778999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEcCCCcCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHHHHHh
Q 012891 388 VLRGKGLAKNGLFLDHGDQYVRFRVNFPTALNERQRAILEEFAEEE 433 (454)
Q Consensus 388 ~l~g~Gmp~~~~~~~rGdL~v~~~V~~P~~ls~~q~~~l~~~~~~~ 433 (454)
+|+|+|||..+. ..+|||||+|+|.||+.||++|+++|++|+...
T Consensus 321 ri~g~G~p~~~~-~~~GDL~v~~~v~~P~~l~~~q~~~l~~l~~~~ 365 (386)
T PRK14289 321 RLRNKGLPSVNG-YGTGDLLVNVSVYIPETLSKEEKQTLEKMENSD 365 (386)
T ss_pred EECCCCcCCCCC-CCCCcEEEEEEEEeCCCCCHHHHHHHHHHHhhc
Confidence 999999997532 247999999999999999999999999999853
No 28
>PRK14293 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=2.9e-72 Score=572.69 Aligned_cols=344 Identities=37% Similarity=0.678 Sum_probs=288.8
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHhhhhhhhhhhhcccccCCCCCccccCCC
Q 012891 82 RDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAGD 161 (454)
Q Consensus 82 ~~~Y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yd~~~~~g~~~~~~~~~~ 161 (454)
.|||+||||+++||.+|||+|||+||++||||+++ ++.|+++|++|++||+||+||.+|++||.+|..+..+. .+
T Consensus 3 ~d~y~vLgv~~~a~~~eik~ayr~la~~~HPD~~~-~~~a~~~f~~i~~Ay~vL~~~~~R~~yd~~g~~g~~~~----~~ 77 (374)
T PRK14293 3 ADYYEILGVSRDADKDELKRAYRRLARKYHPDVNK-EPGAEDRFKEINRAYEVLSDPETRARYDQFGEAGVSGA----AG 77 (374)
T ss_pred CChhhhcCCCCCCCHHHHHHHHHHHHHHHCCCCCC-CcCHHHHHHHHHHHHHHHhchHHHHHHhhccccccccC----CC
Confidence 69999999999999999999999999999999997 46788999999999999999999999999976543210 00
Q ss_pred CCCcc-ccCCCCcccccccccccCcccchhccccccccccCCCCcEEEEEEEeeccccCcceeeeeceeecccCCCCCCc
Q 012891 162 AEGFR-YAGDAEGFRYAYQTHFSDSFHKIFSEIFEDETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGF 240 (454)
Q Consensus 162 ~~~~~-~~~~~~~f~~~~~~~f~~~f~~~F~~~f~~~~~~~g~di~~~l~itlee~~~G~~k~v~~~~~~~C~~C~G~G~ 240 (454)
+.++. +.+..+.|+.||+. |+ +... .........+.+++|+++.|.|||+|+|+|+++++.+++.+.|+.|.|+|.
T Consensus 78 ~~~~~~~~~~~d~f~~~fg~-~~-~~~~-~~~~~~~~~~~kg~di~~~l~vsLee~~~G~~k~i~~~r~~~C~~C~G~G~ 154 (374)
T PRK14293 78 FPDMGDMGGFADIFETFFSG-FG-GAGG-QGGRRRRRGPQRGDDLRYDLKLDFREAIFGGEKEIRIPHLETCETCRGSGA 154 (374)
T ss_pred cCCcccccchHHHHHHHhcc-cC-CCCC-CCccccccCccCCCCeEEEEEeeHHHHhCCceEEEEeeccccCCCCCCcCC
Confidence 00000 00001222222221 00 0000 000000011346789999999999999999999999999999999999999
Q ss_pred cCCCccccCCCccccceEEeC--------CccccCCCCCCceEEeeeecccccCCceeeceEEEEEEecCccCCCCEEEE
Q 012891 241 PADAKTKICSTCRGIGRVTIP--------PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVDSGDTIRV 312 (454)
Q Consensus 241 ~~~~~~~~C~~C~G~G~~~~~--------~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~~~V~Ip~G~~~G~~i~~ 312 (454)
........|+.|+|+|.+... ....+|+.|.|.|++++++|..|.|.|++.+.++++|.||||+++|++|+|
T Consensus 155 ~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~~~V~IppG~~~G~~i~l 234 (374)
T PRK14293 155 KPGTGPTTCSTCGGAGQVRRATRTPFGSFTQVSECPTCNGTGQVIEDPCDACGGQGVKQVTKKLKINIPAGVDTGTRLRV 234 (374)
T ss_pred CCCCCCeeCCCCCCcceEEEEEecCcceEEEEeeCCCCCcceeEeccCCCCCCCCcccccceEEEEEeCCCCCCCCEEEE
Confidence 988888999999999986532 125789999999999999999999999999999999999999999999999
Q ss_pred CCCcCCCCCCCCCccEEEEEEEecCCcccccCCCeEEEEeeCHHHHhCCCEEEEeCCCCEEEEEeCCCCCCCcEEEEcCC
Q 012891 313 PEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGKVQVKIPKGVQPGQLLVLRGK 392 (454)
Q Consensus 313 ~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~Isl~eAllG~~~~i~tldG~~~v~ip~~~~~g~~~~l~g~ 392 (454)
+|+|++...+..+|||||+|++++|+.|+|+|+||+++++|+|.+|++|+++.|+||||+++|+||+++++|++++|+|+
T Consensus 235 ~g~G~~~~~~~~~GDL~v~v~v~~~~~f~r~g~DL~~~~~Isl~eAl~G~~~~i~~ldG~~~i~ip~~~~~g~~~ri~g~ 314 (374)
T PRK14293 235 SGEGDAGLRGGPPGDLYVYLFVKNDPEFRRDGINILSEIKISYLQAILGDTLEVDTVDGPVELTIPAGTQPNTVLTLENK 314 (374)
T ss_pred ccCccCCCCCCCCcCEEEEEEEeCCCccChhhhceEEEeccCHHHHhCCCEEEecCCCCCEEEEeCCCCCCCCEEEECCC
Confidence 99999876667789999999999999999999999999999999999999999999999988999999999999999999
Q ss_pred CcCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHHHHHh
Q 012891 393 GLAKNGLFLDHGDQYVRFRVNFPTALNERQRAILEEFAEEE 433 (454)
Q Consensus 393 Gmp~~~~~~~rGdL~v~~~V~~P~~ls~~q~~~l~~~~~~~ 433 (454)
|||..+....+|||||+|+|+||+.|+++|+++|++|++.+
T Consensus 315 G~p~~~~~~~~GDL~v~~~v~~P~~l~~~~~~l~~~l~~~~ 355 (374)
T PRK14293 315 GVPRLGNPVARGDHLITVKVKIPTRISDEERELLEKLAKIK 355 (374)
T ss_pred CCCCCCCCCCcCCEEEEEEEECCCCCCHHHHHHHHHHHhhc
Confidence 99976443457999999999999999999999999999764
No 29
>PRK14292 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=8.2e-71 Score=562.11 Aligned_cols=330 Identities=36% Similarity=0.652 Sum_probs=284.2
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHhhhhhhhhhhhcccccCCCCCccccCCC
Q 012891 82 RDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAGD 161 (454)
Q Consensus 82 ~~~Y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yd~~~~~g~~~~~~~~~~ 161 (454)
.|||++|||+++||.+|||+|||+||++||||+++ +++|+++|++|++||+||+||.+|+.||++|..+..+. .+.++
T Consensus 2 ~d~y~~Lgv~~~a~~~~ik~ayr~l~~~~hpD~~~-~~~a~~~~~~i~~Ay~vL~d~~~r~~yd~~G~~~~~~~-~~~~~ 79 (371)
T PRK14292 2 MDYYELLGVSRTASADEIKSAYRKLALKYHPDRNK-EKGAAEKFAQINEAYAVLSDAEKRAHYDRFGTAPGAGM-PGGDP 79 (371)
T ss_pred CChHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCC-ChhHHHHHHHHHHHHHHhcchhhhhhHhhcCCcccccc-cCCcc
Confidence 59999999999999999999999999999999997 57789999999999999999999999999987642110 00001
Q ss_pred CCCccccCCCCcccccccccccCcccchhcccccc---------ccccCCCCcEEEEEEEeeccccCcceeeeeceeecc
Q 012891 162 AEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFED---------ETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPC 232 (454)
Q Consensus 162 ~~~~~~~~~~~~f~~~~~~~f~~~f~~~F~~~f~~---------~~~~~g~di~~~l~itlee~~~G~~k~v~~~~~~~C 232 (454)
++++. | ++.++|+.+|++ ..+.++.|+++.+.|||+|+|+|+++++.+++.+.|
T Consensus 80 ~~~~~-------~----------d~~d~f~~~fg~~~~~~~~~~~~~~~g~d~~~~l~~sLee~~~G~~~~v~~~r~~~C 142 (371)
T PRK14292 80 FGGMG-------F----------DPMDIFEQLFGGAGFGGGRGRRGPARGDDLETEARITLEQARAGEEVEVEVDRLTEC 142 (371)
T ss_pred cCccC-------C----------ChHHHHHHhhCCCCcCCCCCcccccCCCCeEEEEeccHHHHcCCeEEEEEEEeeecC
Confidence 11100 0 112333333331 123468899999999999999999999999999999
Q ss_pred cCCCCCCccCCC-ccccCCCccccceEEeC--------CccccCCCCCCceEEeeeecccccCCceeeceEEEEEEecCc
Q 012891 233 DSCHGRGFPADA-KTKICSTCRGIGRVTIP--------PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAG 303 (454)
Q Consensus 233 ~~C~G~G~~~~~-~~~~C~~C~G~G~~~~~--------~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~~~V~Ip~G 303 (454)
+.|+|+|..... ...+|+.|+|+|.+... ....+|+.|+|.|..++..|..|.|.|++.+.++++|.||||
T Consensus 143 ~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~~~V~Ip~G 222 (371)
T PRK14292 143 EHCHGSRTEPGGKPPKTCPTCRGAGAVRAQARTIFGVVETQQPCPTCRGEGQIITDPCTVCRGRGRTLKAETVKVKLPRG 222 (371)
T ss_pred CCCcccccCCCCCCCccCCCCCCccEEEEEEeccCceEEEeeecCCCcccceecCCCCCCCCCceEEeecceEEEEECCC
Confidence 999999997765 37899999999987532 136789999999999999999999999999999999999999
Q ss_pred cCCCCEEEECCCcCCCCCCCCCccEEEEEEEecCCcccccCCCeEEEEeeCHHHHhCCCEEEEeCCCCEEEEEeCCCCCC
Q 012891 304 VDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGKVQVKIPKGVQP 383 (454)
Q Consensus 304 ~~~G~~i~~~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~Isl~eAllG~~~~i~tldG~~~v~ip~~~~~ 383 (454)
+++|++|+|+|+|++.+.+ . |||||+|++++|+.|+|+|+||++++.|+|.+|++|+++.|+||||+..|+||+++++
T Consensus 223 ~~~G~~i~~~G~G~~~~~~-~-GDL~v~i~v~~h~~f~r~g~dL~~~~~isl~eAl~G~~~~i~tldG~~~v~ip~g~~~ 300 (371)
T PRK14292 223 IDEGYRIRVAGMGNEGPGG-N-GDLYVHIEMEPHPELRREQEHLIYEARIGFAKAALGGQITVPTLDGPQVIEVKPGTQH 300 (371)
T ss_pred CCCCcEEEEecCcCCCCCC-C-CCEEEEEEEecCCccccchhceeEEeccCHHHHhCCCeEEEECCCCCEEEecCCCcCC
Confidence 9999999999999997543 3 9999999999999999999999999999999999999999999999888999999999
Q ss_pred CcEEEEcCCCcCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHHHHHh
Q 012891 384 GQLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPTALNERQRAILEEFAEEE 433 (454)
Q Consensus 384 g~~~~l~g~Gmp~~~~~~~rGdL~v~~~V~~P~~ls~~q~~~l~~~~~~~ 433 (454)
|++++|+|+|||..+. ..+|||||+|+|.||+.|+++|+++|++|+..+
T Consensus 301 g~~~~i~g~G~p~~~~-~~~GDL~V~~~v~~P~~l~~~q~~ll~~~~~~~ 349 (371)
T PRK14292 301 GDLHRLRGQGMPRLQG-AGTGDLIVEYEIAVPKQLSPEAREALEAYARAV 349 (371)
T ss_pred CcEEEECCCCCCCCCC-CCCCCEEEEEEEECCCCCCHHHHHHHHHHHhhc
Confidence 9999999999997532 246999999999999999999999999999653
No 30
>KOG0712 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=6.5e-67 Score=511.48 Aligned_cols=321 Identities=32% Similarity=0.576 Sum_probs=281.9
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHhhhhhhhhhhhcccccCCCCCccccCC
Q 012891 81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAG 160 (454)
Q Consensus 81 ~~~~Y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yd~~~~~g~~~~~~~~~ 160 (454)
...||+||||+++||++|||+|||+||++||||||++ +.++|++|++||||||||++|.+||++|+++......+
T Consensus 3 ~~~~y~il~v~~~As~~eikkayrkla~k~HpDkn~~---~~ekfkei~~AyevLsd~ekr~~yD~~g~~~~~~g~~~-- 77 (337)
T KOG0712|consen 3 NTKLYDILGVSPDASEEEIKKAYRKLALKYHPDKNPD---AGEKFKEISQAYEVLSDPEKREIYDQYGEEGLQGGGGG-- 77 (337)
T ss_pred ccccceeeccCCCcCHHHHHHHHHHHHHHhCCCCCcc---HHHHHHHHHHHHHHhcCHHHHHHHHhhhhhhhcccCCC--
Confidence 4689999999999999999999999999999999986 78999999999999999999999999987765321111
Q ss_pred CCCCccccCCCCcccccccccccCcccchhccccccccccCCCCcEEEEEEEeeccccCcceeeeeceeecccCCCCCCc
Q 012891 161 DAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFEDETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGF 240 (454)
Q Consensus 161 ~~~~~~~~~~~~~f~~~~~~~f~~~f~~~F~~~f~~~~~~~g~di~~~l~itlee~~~G~~k~v~~~~~~~C~~C~G~G~ 240 (454)
+++ ..|+.||+ |+ ..+.+...+++|+.+.+.|+|+|+|.|.++.+.++++.+|+.|.|.|.
T Consensus 78 --~g~------~~f~~~F~--~g---------~~~~~~~~rg~~~~~~~~~~Le~~y~G~s~kl~l~~~~iCs~C~GsGg 138 (337)
T KOG0712|consen 78 --GGF------GGFSQFFG--FG---------GNGGRGRQRGKDVVHQLKVTLEELYMGKSKKLFLSRNFICSKCSGSGG 138 (337)
T ss_pred --CCC------ccHHHhcc--CC---------CcCccccccCCCceEEEEEEHHHhhcCCccceecccCccCCcCCCCCC
Confidence 111 11555544 10 112234456999999999999999999999999999999999999999
Q ss_pred cCCCccccCCCccccceEEeC---------CccccCCCCCCceEE--eeeecccccCCceeeceEEEEEEecCccCCCCE
Q 012891 241 PADAKTKICSTCRGIGRVTIP---------PFTSTCSTCKGLGRI--IKDHCMTCKGSGVVDGVKEVKVTIPAGVDSGDT 309 (454)
Q Consensus 241 ~~~~~~~~C~~C~G~G~~~~~---------~~~~~C~~C~G~G~~--~~~~C~~C~g~G~~~~~~~~~V~Ip~G~~~G~~ 309 (454)
..+... .|+.|.|+|..+.. +++..|..|+|+|.+ .++.|+.|.|.++++..+.++|+|++|+.+++.
T Consensus 139 ksg~~~-~C~~C~GsGv~~~~~~~gPg~~qs~q~~C~~C~G~G~~~~~kd~C~~C~G~~~v~~kkil~v~V~~g~~~~~k 217 (337)
T KOG0712|consen 139 KSGSAP-KCTTCRGSGVQTRTRQMGPGMVQSPQLVCDSCNGSGETISLKDRCKTCSGAKVVREKKILEVHVEPGMPHGQK 217 (337)
T ss_pred CCCCCC-CCCCCCCCCceeEEEeccccccccceeEeccCCCccccccccccCcccccchhhhhhheeeccccCCCcccce
Confidence 877654 89999999986431 358899999999998 478999999999999999999999999999999
Q ss_pred EEECCCcCCCCCCCCCccEEEEEEEecCCcccccCCCeEEEEeeCHHHHhCCCEEEEeCCCCE-EEEEeCCC--CCCCcE
Q 012891 310 IRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGK-VQVKIPKG--VQPGQL 386 (454)
Q Consensus 310 i~~~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~Isl~eAllG~~~~i~tldG~-~~v~ip~~--~~~g~~ 386 (454)
+.+.|++++.+ +..|||++|.|..++|+.|.|.|+||++..+|++.||++|+.+.+.||||+ +.+.++|+ ++||++
T Consensus 218 i~f~geadea~-g~~pgD~vl~i~~k~h~~F~Rrg~dL~~~~~i~l~eal~G~~~~~~~ldGr~l~~~~~pg~vi~~~~~ 296 (337)
T KOG0712|consen 218 ITFKGEADEAP-GTKPGDVVLLIDQKEHPGFDRRGSDLYRKLTISLVEALCGFQRVWETLDGRLLKLSSKPGEVISPGDT 296 (337)
T ss_pred eeeeeeeeecC-CCcCccEEEEecccccccceecccccceeeecchhhccccceEEEEccCCceEEEecCCCceeChhHE
Confidence 99999999875 667999999999999999999999999999999999999999999999998 68888886 899999
Q ss_pred EEEcCCCcCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHHH
Q 012891 387 LVLRGKGLAKNGLFLDHGDQYVRFRVNFPTALNERQRAILEEFA 430 (454)
Q Consensus 387 ~~l~g~Gmp~~~~~~~rGdL~v~~~V~~P~~ls~~q~~~l~~~~ 430 (454)
++|+|+|||..+++ +|||||+|+|+||+ |++.+..+|+.++
T Consensus 297 ~~v~~~gmp~~~~~--~g~lyi~~~v~fp~-~~~~~~~~l~~~l 337 (337)
T KOG0712|consen 297 KRVEGEGMPIFRNP--KGDLYIKFEVKFPK-LSPSQLKMLEDLL 337 (337)
T ss_pred EeecCCCcccccCC--CCcEEEEEEEEcCC-CChHHHHHHHhhC
Confidence 99999999998765 89999999999999 9999999998764
No 31
>PRK14299 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=1.6e-58 Score=456.66 Aligned_cols=269 Identities=37% Similarity=0.637 Sum_probs=221.2
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHhhhhhhhhhhhcccccCCCCCccccCC
Q 012891 81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAG 160 (454)
Q Consensus 81 ~~~~Y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yd~~~~~g~~~~~~~~~ 160 (454)
..|||+||||+++||.+|||+|||+||++||||+++ ++.++++|++|++||+||+||.+|+.||++|..+......+..
T Consensus 3 ~~d~y~vLgv~~~a~~~eik~ayr~la~~~HPD~~~-~~~~~~~f~~i~~Ay~~L~d~~kr~~yD~~g~~~~~~~~~~~~ 81 (291)
T PRK14299 3 YKDYYAILGVPKNASQDEIKKAFKKLARKYHPDVNK-SPGAEEKFKEINEAYTVLSDPEKRRIYDTYGTTAASAGWQGPP 81 (291)
T ss_pred CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCC-ChhHHHHHHHHHHHHHHhcCHHHHHHHHhcCCccccccccCCC
Confidence 479999999999999999999999999999999997 5788999999999999999999999999998764321100000
Q ss_pred -CCCCccccCCCCcccccccccccCcccchhcccccc---------------ccccCCCCcEEEEEEEeeccccCcceee
Q 012891 161 -DAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFED---------------ETSHFAPDIQVELVLSFAEAAKGCTKHV 224 (454)
Q Consensus 161 -~~~~~~~~~~~~~f~~~~~~~f~~~f~~~F~~~f~~---------------~~~~~g~di~~~l~itlee~~~G~~k~v 224 (454)
...++ ..|..+ .+ ++|.++|+.+|++ ....++.|+++.+.|||+|+|.|+++.+
T Consensus 82 ~~~~~~------~~~~~~---~~-~~~~d~f~~~fgg~~~~~~~g~~~~~~~~~~~~g~dl~~~l~isL~ea~~G~~~~i 151 (291)
T PRK14299 82 PGPPGG------GDFSGF---NV-GDFSDFFQQLFGGRGGFGGFGDLFGSVGRRARKGRDLEAELPLTLEEAYRGGEKVV 151 (291)
T ss_pred CCCCCC------CCcccc---Cc-CCHHHHHHHHhCCCCCCCCcccccccccCCCCCCCCEEEEEEecHHHHhCCCeEEE
Confidence 00000 001000 00 1122333333321 1134688999999999999999999887
Q ss_pred eeceeecccCCCCCCccCCCccccCCCccccceEEeCCccccCCCCCCceEEeeeecccccCCceeeceEEEEEEecCcc
Q 012891 225 SFDAFVPCDSCHGRGFPADAKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGV 304 (454)
Q Consensus 225 ~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~~~V~Ip~G~ 304 (454)
.+. .++++|.||||+
T Consensus 152 ~l~-----------------------------------------------------------------g~~~~V~Ip~G~ 166 (291)
T PRK14299 152 EVA-----------------------------------------------------------------GERLSVRIPPGV 166 (291)
T ss_pred eeC-----------------------------------------------------------------CEEEEEecCCCc
Confidence 541 146789999999
Q ss_pred CCCCEEEECCCcCCCCCCCCCccEEEEEEEecCCcccccCCCeEEEEeeCHHHHhCCCEEEEeCCCCEEEEEeCCCCCCC
Q 012891 305 DSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGKVQVKIPKGVQPG 384 (454)
Q Consensus 305 ~~G~~i~~~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~Isl~eAllG~~~~i~tldG~~~v~ip~~~~~g 384 (454)
++|++|+|+|+|++. |||+|+|++++|+.|+|+|+||+++++|++.+|++|+++.|+||||.++|+||+++++|
T Consensus 167 ~~G~~ir~~g~G~~~------GDL~v~i~v~~h~~f~R~G~DL~~~~~Isl~eAl~G~~~~v~tldG~~~v~ip~~~~~g 240 (291)
T PRK14299 167 REGQVIRLAGKGRQG------GDLYLVVRLLPHPVFRLEGDDLYATVDVPAPIAVVGGKVRVMTLDGPVEVTIPPRTQAG 240 (291)
T ss_pred CCCcEEEECCCCCCC------CCEEEEEEEcCCCCeEEECCEEEEEEecCHHHHhCCCEEEEECCCCCEEEEeCCCcCCC
Confidence 999999999999863 89999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEEEcCCCcCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHHHHHh
Q 012891 385 QLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPTALNERQRAILEEFAEEE 433 (454)
Q Consensus 385 ~~~~l~g~Gmp~~~~~~~rGdL~v~~~V~~P~~ls~~q~~~l~~~~~~~ 433 (454)
++++|+|+|||..+ ..+|||||+|+|.||+.|+++|+++|++|+...
T Consensus 241 ~~~rl~g~G~p~~~--~~~GDL~v~~~V~~P~~l~~~~~~~l~~l~~~~ 287 (291)
T PRK14299 241 RKLRLKGKGWPRGP--AGRGDQYAEVRITIPTRPTPEEERLYKQLAELY 287 (291)
T ss_pred CEEEECCCCCCCCC--CCCCCEEEEEEEECCCCCCHHHHHHHHHHHhhh
Confidence 99999999999643 347999999999999999999999999998653
No 32
>PRK10266 curved DNA-binding protein CbpA; Provisional
Probab=100.00 E-value=5.7e-57 Score=448.78 Aligned_cols=284 Identities=31% Similarity=0.600 Sum_probs=231.7
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHhhhhhhhhhhhcccccCCCCCccccCC
Q 012891 81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAG 160 (454)
Q Consensus 81 ~~~~Y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yd~~~~~g~~~~~~~~~ 160 (454)
..|||++|||+++||.+|||+|||+||++||||+++ ++.++++|++|++||++|+||.+|+.||.++..+.... ++..
T Consensus 3 ~~d~y~~Lgv~~~a~~~eik~ayr~la~k~HPD~~~-~~~~~~~f~~i~~Ay~~L~~~~kr~~yD~~g~~~~~~~-~~~~ 80 (306)
T PRK10266 3 LKDYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSK-EPDAEARFKEVAEAWEVLSDEQRRAEYDQLWQHRNDPQ-FNRQ 80 (306)
T ss_pred cCChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCC-CccHHHHHHHHHHHHHHhhhHHHHHHHHHhhccccCcc-cccc
Confidence 369999999999999999999999999999999987 46789999999999999999999999999864321100 0000
Q ss_pred CCCCccccCCCCcccccccccccCcccchhcccccc-------ccccCCCCcEEEEEEEeeccccCcceeeeeceeeccc
Q 012891 161 DAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFED-------ETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCD 233 (454)
Q Consensus 161 ~~~~~~~~~~~~~f~~~~~~~f~~~f~~~F~~~f~~-------~~~~~g~di~~~l~itlee~~~G~~k~v~~~~~~~C~ 233 (454)
. .+ +++..|. ..+|.++|+.+|++ ....++.|+.+++.|+|+|+|.|+.+++.+.+.+
T Consensus 81 ~--~~---~~~~~~~-------~~~~~~~f~~~~g~~~~~~~~~~~~kg~di~~~v~isLee~~~G~~k~i~~~~~~--- 145 (306)
T PRK10266 81 F--QH---GDGQSFN-------AEDFDDIFSSIFGQHARQSRQRPAARGHDIEIEVAVFLEETLTEHKRTISYNLPV--- 145 (306)
T ss_pred c--cc---CCCCCCC-------CCCHHHHHHHHhCCCCCCCCCCCCCCCCceEEEEEEEHHHhcCCceEEEEEeccc---
Confidence 0 00 0000110 01244555555552 1133678999999999999999999999876542
Q ss_pred CCCCCCccCCCccccCCCccccceEEeCCccccCCCCCCceEEeeeecccccCCceeeceEEEEEEecCccCCCCEEEEC
Q 012891 234 SCHGRGFPADAKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVDSGDTIRVP 313 (454)
Q Consensus 234 ~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~~~V~Ip~G~~~G~~i~~~ 313 (454)
|. |.|.+. ....++++|.||||+++|++|+|+
T Consensus 146 -~~-----------------g~G~~~------------------------------~~~~~~~~V~Ip~G~~~G~~i~~~ 177 (306)
T PRK10266 146 -YN-----------------AFGMIE------------------------------QEIPKTLNVKIPAGVGNGQRIRLK 177 (306)
T ss_pred -cc-----------------CCCeEE------------------------------EeeeEEEEEEECCCCcCCcEEEEe
Confidence 11 222110 012367999999999999999999
Q ss_pred CCcCCCCCCCCCccEEEEEEEecCCcccccCCCeEEEEeeCHHHHhCCCEEEEeCCCCEEEEEeCCCCCCCcEEEEcCCC
Q 012891 314 EAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGKVQVKIPKGVQPGQLLVLRGKG 393 (454)
Q Consensus 314 g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~Isl~eAllG~~~~i~tldG~~~v~ip~~~~~g~~~~l~g~G 393 (454)
|+|++...+..+|||+|+|+++||+.|+|+|+||+++++|++.+|++|+++.|+|+||+++|+||+++++|++++|+|+|
T Consensus 178 g~G~~~~~~~~~GDl~v~i~v~ph~~f~r~g~DL~~~~~Isl~~al~G~~~~i~~~~g~v~v~ip~g~~~g~~~ri~g~G 257 (306)
T PRK10266 178 GQGTPGENGGPNGDLWLVIHIAPHPLFDIVGQDLEIVVPLAPWEAALGAKVTVPTLKESILLTIPPGSQAGQRLRVKGKG 257 (306)
T ss_pred cCCcCCCCCCCCccEEEEEEEcCCCCeEEeCCceEEEEecCHHHHhCCCEEEeeCCCccEEEEeCCCcCCCCEEEECCCC
Confidence 99998766778999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHHHHH
Q 012891 394 LAKNGLFLDHGDQYVRFRVNFPTALNERQRAILEEFAEE 432 (454)
Q Consensus 394 mp~~~~~~~rGdL~v~~~V~~P~~ls~~q~~~l~~~~~~ 432 (454)
||..+ .+|||||+|+|.+|+.||++|+++|++|++.
T Consensus 258 ~p~~~---~~GdL~v~~~v~~P~~l~~~q~~l~~~l~~~ 293 (306)
T PRK10266 258 LVSKK---QTGDLYAVLKIVMPPKPDEKTAALWQQLADA 293 (306)
T ss_pred CCCCC---CCCCEEEEEEEECCCCCCHHHHHHHHHHHhh
Confidence 99754 3799999999999999999999999999875
No 33
>TIGR03835 termin_org_DnaJ terminal organelle assembly protein TopJ. This model describes TopJ (MG_200, CbpA), a DnaJ homolog and probable assembly protein of the Mycoplasma terminal organelle. The terminal organelle is involved in both cytadherence and gliding motility.
Probab=100.00 E-value=2.4e-41 Score=354.92 Aligned_cols=173 Identities=17% Similarity=0.200 Sum_probs=144.6
Q ss_pred EEEEEEEeeccccCcceeeeeceeecccCCCCCCccCCCccccCCCccccceEEeCCccccCCCCCCceEEeeeeccccc
Q 012891 206 QVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTCK 285 (454)
Q Consensus 206 ~~~l~itlee~~~G~~k~v~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~C~~C~ 285 (454)
...+.|+|+++|+||++++++.|.+.| |.|.
T Consensus 660 ~y~l~vtLEeLY~G~tKkIKitR~V~~----g~G~--------------------------------------------- 690 (871)
T TIGR03835 660 VYEEEVPQILFFNNQIKEIKYTRHTVD----GNTE--------------------------------------------- 690 (871)
T ss_pred EEecccCHHHHhCCCeEEEEEEEeecc----CCCc---------------------------------------------
Confidence 777889999999999999999887654 1111
Q ss_pred CCceeeceEEEEEEecCccCCCCEEEECCCcCCCCCCCCCccEEEEEEEecCCcccccCCCeEEEEeeCHHHHhCCCEEE
Q 012891 286 GSGVVDGVKEVKVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVD 365 (454)
Q Consensus 286 g~G~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~Isl~eAllG~~~~ 365 (454)
..+.+.++++|.||||+++|++|+|+|+|+.++ ++ +|||||+|++++|+.|+|+|+||+++++|+|.+||+|+++.
T Consensus 691 --ktvkE~ktLeVkIPpGVkdGqkIRf~GeGDegp-gg-~GDLyVvIkVKPHp~FrRdGdDL~~~v~ISL~EALLGgtIe 766 (871)
T TIGR03835 691 --STTNEAITLEIQLPITSQLNISAIFKGFGHDFG-NG-CGDLKVVFKVIPSNFFQIKNDGLHVAALVDPLVAYNGGIID 766 (871)
T ss_pred --ceeeeeEEEEEecCCCCCCCCEEEeccccCCCC-CC-CCCEEEEEEEcCCCCeEEECCeEEEEEecCHHHHhcCCEEE
Confidence 123456799999999999999999999999864 33 49999999999999999999999999999999999999999
Q ss_pred EeCCCCEEEEEeCCCCCCCcEEEEcCCCcCCCCCCCCCCcEEEEEEEE-CCCC--CCHHHHHHHHHHHHHh
Q 012891 366 VPTLSGKVQVKIPKGVQPGQLLVLRGKGLAKNGLFLDHGDQYVRFRVN-FPTA--LNERQRAILEEFAEEE 433 (454)
Q Consensus 366 i~tldG~~~v~ip~~~~~g~~~~l~g~Gmp~~~~~~~rGdL~v~~~V~-~P~~--ls~~q~~~l~~~~~~~ 433 (454)
|+||||++.|+||+++++|++++|+|+|||..+ ..||||||+|.|. +++. -|.-|.+..-+|+..+
T Consensus 767 IpTLDGrVkLkIPpgTqpGqvLRIkGKGMP~~~--~~RGDLyV~f~V~~~~k~~~~~n~qv~~f~~l~~~e 835 (871)
T TIGR03835 767 VFGPNKLFNVRIPGGIKVNDQVIFKDLGLTKTK--YDKGSLIVHLYYSSVMKKNDRTNVQVQQFNKLALRE 835 (871)
T ss_pred eeCCCCCEEEeeCCCCCCCcEEEECCCCCCCCC--CCCCCEEEEEEEeeccccCCcCChHHHHHHHHHHHH
Confidence 999999999999999999999999999999643 3479999999987 4543 3444555555544443
No 34
>KOG0713 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=5.5e-43 Score=338.67 Aligned_cols=311 Identities=30% Similarity=0.431 Sum_probs=239.8
Q ss_pred CCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHhhhhhhhhhhhcccccCCCCCccccC
Q 012891 80 SKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSA 159 (454)
Q Consensus 80 ~~~~~Y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yd~~~~~g~~~~~~~~ 159 (454)
..+|||+||||+++||..|||+|||+||++||||+|+++|.|.++|++|+.||+|||||.+|+.||++|++|.+...
T Consensus 14 ~~rDfYelLgV~k~Asd~eIKkAYRKLALk~HPDkNpddp~A~e~F~~in~AYEVLsDpekRk~YD~~GEegL~~~~--- 90 (336)
T KOG0713|consen 14 AGRDFYELLGVPKNASDQEIKKAYRKLALKYHPDKNPDDPNANEKFKEINAAYEVLSDPEKRKHYDTYGEEGLKDEN--- 90 (336)
T ss_pred cCCCHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHhhhHhhhcccc---
Confidence 35899999999999999999999999999999999999999999999999999999999999999999877765321
Q ss_pred CCCCCccccCC-CCcccccccccccCcccchhccccccccccCCCCcEEEEEEEeeccccCcceeeeeceeecccCCCCC
Q 012891 160 GDAEGFRYAGD-AEGFRYAYQTHFSDSFHKIFSEIFEDETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGR 238 (454)
Q Consensus 160 ~~~~~~~~~~~-~~~f~~~~~~~f~~~f~~~F~~~f~~~~~~~g~di~~~l~itlee~~~G~~k~v~~~~~~~C~~C~G~ 238 (454)
...++ +++ .++|..||+.. + -.|+.....+...+|.++...+..+++++|.|...+....+.+.|. |.|+
T Consensus 91 ~~~~~---g~~~~~~f~~~f~df-g----~~~~g~~~~e~~~~g~~V~~~~e~~~~h~y~~~~~e~~r~~~v~~~-~~g~ 161 (336)
T KOG0713|consen 91 KDGEG---GGGGNDIFSAFFGDF-G----VTVGGNPLEEALPKGSDVSSDLEKQLEHFYMGNFVEEVREKGVYKP-APGT 161 (336)
T ss_pred ccccc---CCcccchHHHhhccc-c----cccCCCcccCCCCCCceEEeehhhchhhhhcccHHHHHhccCceee-cCcc
Confidence 11111 111 25666655422 1 1112112223466788999999999999999987666554444332 1111
Q ss_pred CccCCCccccCCCccccceEEeCCccccCCCCCCceEEe-eeecccccCCceeeceEEEEEEecCccCCCCEEEECCCcC
Q 012891 239 GFPADAKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRII-KDHCMTCKGSGVVDGVKEVKVTIPAGVDSGDTIRVPEAGN 317 (454)
Q Consensus 239 G~~~~~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~-~~~C~~C~g~G~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~ 317 (454)
- . |+-.- ....+..|.|....+ +..|.+|.+.+......+.++.+..|...|....+..+|.
T Consensus 162 ~--------~---~~~~~------~~~~~~~~~g~~~~~q~~~~~~~~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (336)
T KOG0713|consen 162 R--------K---CNCRL------EMFTQQEGPGRFQMLQEAVCDECPNVKLVLEEDPLEVEFERGDADGPEEIFELEGE 224 (336)
T ss_pred c--------c---cCChh------hheeeccCCChhhhhhhhhhccCCccceeecCCceeeeeeecccCCceeeeeccCC
Confidence 1 0 11000 011233344444433 4578888888888889999999999999999999999998
Q ss_pred CCCCCCCCccEEEEEEEecCCcccccCCCeEEEEeeCHHHHhCCCEEEEeCCCCE-EEEEeCCCCCCCcEEEEcCCCcCC
Q 012891 318 AGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGK-VQVKIPKGVQPGQLLVLRGKGLAK 396 (454)
Q Consensus 318 ~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~Isl~eAllG~~~~i~tldG~-~~v~ip~~~~~g~~~~l~g~Gmp~ 396 (454)
+.. -+.+||+++.+..-+|+.|.|+++||++++.|++.+++.|+..++.++|+. +.+.--.+..|+..++.+++|||.
T Consensus 225 ~h~-~~~~gD~~f~~~~y~~~~~~~k~~~~~~n~~~sl~~~~v~~~~e~~~~d~~~~~~~r~~~~~p~~~~~~~~~~~~~ 303 (336)
T KOG0713|consen 225 PHI-DGVPGDLFFKIVSYTHPRFERKGDDLYTNVTISLEAALVGFEMEILHLDGHYVEVSRKKITWPGARTRKKGEGMPL 303 (336)
T ss_pred cce-ecccCCceeeeEEecccceecCccchhhHHHHHHHHHHHHHHHHhhccchhhhhhhhhhccccchhhhhhhccchh
Confidence 764 568999999999999999999999999999999999999999999999997 455555678899999999999997
Q ss_pred CCCCCCCCcEEEEEEEECCC-CCCH
Q 012891 397 NGLFLDHGDQYVRFRVNFPT-ALNE 420 (454)
Q Consensus 397 ~~~~~~rGdL~v~~~V~~P~-~ls~ 420 (454)
.......|+++++|.+.+|. .++.
T Consensus 304 l~~~~~~~~~~~t~~~~~~~~~~~~ 328 (336)
T KOG0713|consen 304 LKNRNEKGNLYVTFDVEFPKSSLSD 328 (336)
T ss_pred hhccchhcceeEEecccCcccccch
Confidence 64445679999999999995 4666
No 35
>KOG0715 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=6.4e-40 Score=321.49 Aligned_cols=240 Identities=43% Similarity=0.774 Sum_probs=204.7
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHhhhhhhhhhhhcccccCCCCCccccCCC
Q 012891 82 RDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSAGD 161 (454)
Q Consensus 82 ~~~Y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yd~~~~~g~~~~~~~~~~ 161 (454)
.|||+||||+++|+..|||+||++||++||||.|.+ ++|.++|++|.+|||||+|+.+|.+||.++..+ ..+
T Consensus 43 ~d~Y~vLgv~~~At~~EIK~Af~~LaKkyHPD~n~~-~~a~~kF~eI~~AYEiLsd~eKR~~YD~~~~~~-------~~~ 114 (288)
T KOG0715|consen 43 EDYYKVLGVSRNATLSEIKSAFRKLAKKYHPDVNKD-KEASKKFKEISEAYEILSDEEKRQEYDVYGLEQ-------HGE 114 (288)
T ss_pred cchhhhhCcCCCCCHHHHHHHHHHHHHhhCCCCCCC-cchhhHHHHHHHHHHHhcCHHHHHHHHHhhhhc-------ccc
Confidence 499999999999999999999999999999999986 489999999999999999999999999996543 000
Q ss_pred CCCccccCCCCcccccccccccCcccchhcccccc-c-cccCCCCcEEEEEEEeeccccCcceeeeeceeecccCCCCCC
Q 012891 162 AEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFED-E-TSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRG 239 (454)
Q Consensus 162 ~~~~~~~~~~~~f~~~~~~~f~~~f~~~F~~~f~~-~-~~~~g~di~~~l~itlee~~~G~~k~v~~~~~~~C~~C~G~G 239 (454)
+ +++++ ++|...|++ . ....+.++++.+.++|++|..|+.+.+.+.....|..|.|.|
T Consensus 115 ~-------~g~~~-------------~~~~~~~~~~~~~~~~~~~~~~d~~~~f~~A~~g~~~~~~~~~~~~~~t~~~~~ 174 (288)
T KOG0715|consen 115 F-------GGNPF-------------DVFLEFFGGKMNKRVPDKDQYYDLSLDFKEAVRGSKKRISFNVLSDCETCFGSG 174 (288)
T ss_pred c-------cCCcc-------------chHHHhhcccccccccCcccccccccCHHHHhhccccceEEEeecccccccCcC
Confidence 0 11221 122222222 1 122345788889999999999999999999999999999999
Q ss_pred ccCCCccccCCCccccceEEe---CCccc-cCCCCCCceEEeeeecccccCCceeeceEEEEEEecCccCCCCEEEECCC
Q 012891 240 FPADAKTKICSTCRGIGRVTI---PPFTS-TCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVDSGDTIRVPEA 315 (454)
Q Consensus 240 ~~~~~~~~~C~~C~G~G~~~~---~~~~~-~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~~~V~Ip~G~~~G~~i~~~g~ 315 (454)
...+.....|..|.|+|.+.. .++.. +|..|.|.|.+..+.|..|.|.|.+...+.+.|.+|+|+.++.+|++.+.
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~c~~~~~~~~~~c~~~~g~~~v~~~k~i~i~~~~g~~~~~~l~~~~~ 254 (288)
T KOG0715|consen 175 AEEGAKRESCKTCSGRGLVSNPKEDPFILYTCSYCLGRGLVLRDNCQACSGAGQVRRAKDIMIVLPAGVRSADTLRFAGH 254 (288)
T ss_pred cccccccccchhhhCcccccccccCCcceeecccccccceeccchHHHhhcchhhhhheeEEeecCcccccccEEEEecC
Confidence 999999999999999995433 23433 69999999999999999999999999999999999999999999999998
Q ss_pred cCCCCCCCCCccEEEEEEEecCCcccccCCCeEEEEeeCHHH
Q 012891 316 GNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQ 357 (454)
Q Consensus 316 G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~Isl~e 357 (454)
|.. ||+|.+.|.+++.|+|+|.|+++++.|++.+
T Consensus 255 ~~~--------~l~v~~~v~~~~~~~r~~~~i~~~~~i~~~~ 288 (288)
T KOG0715|consen 255 GND--------DLFVRLIVAKSPSFRREGKDILYDAIISFTQ 288 (288)
T ss_pred Ccc--------eEEEEEEeccCcccccccCcccccccccccC
Confidence 754 9999999999999999999999999998754
No 36
>KOG0714 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.88 E-value=4.3e-22 Score=196.23 Aligned_cols=264 Identities=30% Similarity=0.476 Sum_probs=176.0
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCC-hhHHHHHHHHHHHHHhhhhhhhhhhhcccccCCCCCccccC
Q 012891 81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNN-PSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYSA 159 (454)
Q Consensus 81 ~~~~Y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~-~~a~~~f~~i~~Ay~vL~d~~~r~~yd~~~~~g~~~~~~~~ 159 (454)
..|||++|+|.++|+.+||++||+++|++||||+++.. ..++++|++|++||++|+||.+|..||.++..+..+.....
T Consensus 2 ~~d~~~~l~i~~~as~~~i~ka~~~~a~~~hpdk~~~~~~~~~~~~~~~~ea~~~ls~~~kr~~~d~~~~~~~~~~~~~~ 81 (306)
T KOG0714|consen 2 GKDYYKILGIARSASEEDIKKAYRKLALKYHPDKNPSPKEVAEAKFKEIAEAYEVLSDPKKRKIYDQYGEEGLKGGGSFS 81 (306)
T ss_pred cccHHHHhCccccccHHHHHHHHHHHHHhhCCCCCCCchhhHHHHHhhhhccccccCCHHHhhhccccCccccccCCCCC
Confidence 46999999999999999999999999999999998765 24556899999999999999999999999874443311000
Q ss_pred CC--CC--CccccCCCCccccccccc--ccCc----------c-cch-------hcccccc-----------ccccCCCC
Q 012891 160 GD--AE--GFRYAGDAEGFRYAYQTH--FSDS----------F-HKI-------FSEIFED-----------ETSHFAPD 204 (454)
Q Consensus 160 ~~--~~--~~~~~~~~~~f~~~~~~~--f~~~----------f-~~~-------F~~~f~~-----------~~~~~g~d 204 (454)
.. .+ .+......+.|.+||+.. |+.. + ... +..+.+. ....+...
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (306)
T KOG0714|consen 82 SSFTSELFYFLFRKPDKDFYEFFGVSSPFSGSKKGYRDKNAAPGEEAFKSEGKAFQSLYGPKRKQYDSSGSDRSARQSPP 161 (306)
T ss_pred CCCCCCcceeccCchhhhHHHHhCCCCCCccccccCCccccccCccccccccccccccCCCcccccccccccccccCCCC
Confidence 00 00 011111122344444311 1000 0 000 0000000 00011111
Q ss_pred cEEEEEEEeeccccCcceeeeeceeecccCCCCCCccCCCccccCCCccccceEEeCCccccCCCCCCceEEeeeecccc
Q 012891 205 IQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTC 284 (454)
Q Consensus 205 i~~~l~itlee~~~G~~k~v~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~C~~C 284 (454)
+...+.+++++.+.|+.+...+.+... .....
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------------------------------~~~~~- 193 (306)
T KOG0714|consen 162 VEHPLRVSLEDLYKGESKKMKISRQSF-----------------------------------------------TSNGR- 193 (306)
T ss_pred ccCCcceeHHHhccccceeeecccccc-----------------------------------------------cCCcc-
Confidence 233333355555555544444332110 00000
Q ss_pred cCCceeeceEEEEEEecCccCCCCEEEECCCcCCCCCCCCCccEEEEEEEecCCcccccCCCeEEE--EeeCHHHHhCCC
Q 012891 285 KGSGVVDGVKEVKVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVD--SNISFTQAILGG 362 (454)
Q Consensus 285 ~g~G~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~~~--~~Isl~eAllG~ 362 (454)
........+.+.+.++++.|..+....+|+..+ +..|-++++.+..++|+.|.+.++||... ..|++.+|++|.
T Consensus 194 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~p~~~~f~~~~~~~~~~~~~~~~l~~~~~~~~s~~~~~~~~ 269 (306)
T KOG0714|consen 194 ---EGSSRSRYLSISIKPGWKEGTKITFPEEGDEEP-GILPADIEFVVDEKPHPLFSRDGNDLSYSSGYEISLKEALLGV 269 (306)
T ss_pred ---cccCccceeEEeccCCcccccceeccccccccC-CcCcceeEEEEecCCcccccCCCccceecccceeehhhhhcCc
Confidence 012345678899999999999999999998764 36788999999999999999999999999 999999999999
Q ss_pred EEEEeCCCCE-EEEEeC-CCCCCCcEEEEcCCCcCC
Q 012891 363 KVDVPTLSGK-VQVKIP-KGVQPGQLLVLRGKGLAK 396 (454)
Q Consensus 363 ~~~i~tldG~-~~v~ip-~~~~~g~~~~l~g~Gmp~ 396 (454)
...++++++. ..+.+. ..+.++...+++++|||.
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (306)
T KOG0714|consen 270 TVFVPTLDGRSYSLSINKDLIEPGEEDVIPGEGLPC 305 (306)
T ss_pred ceeeecccCccccCcccccccCCCceeeecCCCCCC
Confidence 9999999997 344444 567899999999999985
No 37
>PF01556 CTDII: DnaJ C terminal domain; InterPro: IPR002939 Molecular chaperones are a diverse family of proteins that function to protect proteins in the intracellular milieu from irreversible aggregation during synthesis and in times of cellular stress. The bacterial molecular chaperone DnaK is an enzyme that couples cycles of ATP binding, hydrolysis, and ADP release by an N-terminal ATP-hydrolizing domain to cycles of sequestration and release of unfolded proteins by a C-terminal substrate binding domain. Dimeric GrpE is the co-chaperone for DnaK, and acts as a nucleotide exchange factor, stimulating the rate of ADP release 5000-fold []. DnaK is itself a weak ATPase; ATP hydrolysis by DnaK is stimulated by its interaction with another co-chaperone, DnaJ. Thus the co-chaperones DnaJ and GrpE are capable of tightly regulating the nucleotide-bound and substrate-bound state of DnaK in ways that are necessary for the normal housekeeping functions and stress-related functions of the DnaK molecular chaperone cycle. Besides stimulating the ATPase activity of DnaK through its J-domain, DnaJ also associates with unfolded polypeptide chains and prevents their aggregation []. Thus, DnaK and DnaJ may bind to one and the same polypeptide chain to form a ternary complex. The formation of a ternary complex may result in cis-interaction of the J-domain of DnaJ with the ATPase domain of DnaK. An unfolded polypeptide may enter the chaperone cycle by associating first either with ATP-liganded DnaK or with DnaJ. DnaK interacts with both the backbone and side chains of a peptide substrate; it thus shows binding polarity and admits only L-peptide segments. In contrast, DnaJ has been shown to bind both L- and D-peptides and is assumed to interact only with the side chains of the substrate. This domain consists of the C-terminal region of the DnaJ protein. The function of this domain is unknown. It is found associated with IPR001623 from INTERPRO and IPR001305 from INTERPRO. ; GO: 0051082 unfolded protein binding, 0006457 protein folding; PDB: 2Q2G_A 2QLD_A 3AGX_A 3AGZ_A 3AGY_A 3I38_J 3LZ8_B 2B26_B 1C3G_A 1XAO_B ....
Probab=99.85 E-value=1.9e-21 Score=156.03 Aligned_cols=80 Identities=43% Similarity=0.783 Sum_probs=69.3
Q ss_pred CeEEEEeeCHHHHhCCCEEEEeCCCC-EEEEEeCCCCCCCcEEEEcCCCcCCCCCCCCCCcEEEEEEEECCCCCCHHHHH
Q 012891 346 DVYVDSNISFTQAILGGKVDVPTLSG-KVQVKIPKGVQPGQLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPTALNERQRA 424 (454)
Q Consensus 346 DL~~~~~Isl~eAllG~~~~i~tldG-~~~v~ip~~~~~g~~~~l~g~Gmp~~~~~~~rGdL~v~~~V~~P~~ls~~q~~ 424 (454)
||+++++|+++||++|++++|+|+|| .++|+||+++++|++++|+|+|||.......+|||||+|+|.||++||++||+
T Consensus 1 DL~~~~~I~l~~al~G~~i~i~~l~g~~~~i~ip~~~~~g~~~~i~g~G~p~~~~~~~~GdL~v~~~V~~P~~ls~~qk~ 80 (81)
T PF01556_consen 1 DLYCTIPISLKEALLGGTISIPTLDGKTIKIKIPPGTQPGQQLRIKGKGMPKPKGGGKRGDLIVKFEVEFPKKLSPEQKE 80 (81)
T ss_dssp EEEEEEEEEHHHHHH-EEEEEE-TTS-EEEEEETST-STT-EEEETTESEEESSSTTSBEEEEEEEEEE--SSTSHHHHH
T ss_pred CeEEEEEeCHHHHhCCCEEEEECCCCCEEEEeccCccCCCcEEeecCCCCCcCCCCCCcCCEEEEEEEECCCCCCHHHhc
Confidence 89999999999999999999999999 68999999999999999999999987554568999999999999999999998
Q ss_pred H
Q 012891 425 I 425 (454)
Q Consensus 425 ~ 425 (454)
|
T Consensus 81 l 81 (81)
T PF01556_consen 81 L 81 (81)
T ss_dssp H
T ss_pred C
Confidence 6
No 38
>KOG0716 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.77 E-value=1.6e-19 Score=170.25 Aligned_cols=72 Identities=49% Similarity=0.808 Sum_probs=68.4
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHhhhhhhhhhhhcccccCCC
Q 012891 81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGS 152 (454)
Q Consensus 81 ~~~~Y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yd~~~~~g~ 152 (454)
..|+|+||||+++|+.++||||||+||++||||+++++|++.++|++||+||++|+||.+|..||.+|..+.
T Consensus 30 ~~~LYdVLgl~k~at~d~IKKaYR~L~~k~HPD~~gd~P~~~dkf~eIN~Ay~ILsD~~kR~~YD~~g~~~l 101 (279)
T KOG0716|consen 30 RLDLYDVLGLPKTATKDEIKKAYRKLALKYHPDKNGDNPEATDKFKEINTAYAILSDPTKRNVYDEYGELGL 101 (279)
T ss_pred hhHHHHHhCCCcccchHHHHHHHHHHHHHhCCCcCCCCchhHHHHHHHHHHHHHhcChhhhhhHHHhhhHHH
Confidence 579999999999999999999999999999999999999999999999999999999999999999976543
No 39
>COG2214 CbpA DnaJ-class molecular chaperone [Posttranslational modification, protein turnover, chaperones]
Probab=99.74 E-value=1.6e-17 Score=156.45 Aligned_cols=68 Identities=56% Similarity=0.903 Sum_probs=64.8
Q ss_pred CCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChh-HHHHHHHHHHHHHhhhhhhhhhhhccc
Q 012891 80 SKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPS-AKRKFQEIRDAYETLRDSEKRAQYDRR 147 (454)
Q Consensus 80 ~~~~~Y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~-a~~~f~~i~~Ay~vL~d~~~r~~yd~~ 147 (454)
...+||+||||+++|+..||++|||++|++||||+++.++. ++++|+.|++||++|+|+.+|..||..
T Consensus 4 ~~~~~y~iLgv~~~as~~eik~ayrkla~~~HPD~~~~~~~~a~~~f~~i~~Ay~vLsd~~~r~~yd~~ 72 (237)
T COG2214 4 DLLDYYEILGVPPNASLEEIKKAYRKLALKYHPDRNPGDPKVAEEKFKEINEAYEILSDPERRAEYDKI 72 (237)
T ss_pred hhhhHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHHHHHhhCHHHHHHhhhh
Confidence 45799999999999999999999999999999999998885 999999999999999999999999996
No 40
>KOG0691 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.73 E-value=2.3e-18 Score=168.01 Aligned_cols=73 Identities=52% Similarity=0.847 Sum_probs=69.3
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHhhhhhhhhhhhcccccCCCC
Q 012891 81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSE 153 (454)
Q Consensus 81 ~~~~Y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yd~~~~~g~~ 153 (454)
..|||++|||+.+|+..||++|||+.|++||||||+++|.|.++|+.+.+||+||+|+.+|+.||.++..+..
T Consensus 4 ~~dyY~lLgi~~~at~~eIkKaYr~kaL~~HPDKNp~dP~A~ekFq~L~eAy~VL~D~~~R~~YDk~~k~~~~ 76 (296)
T KOG0691|consen 4 DTDYYDLLGISEDATDAEIKKAYRKKALQYHPDKNPGDPQAAEKFQELSEAYEVLSDEESRAAYDKLRKSGSS 76 (296)
T ss_pred cchHHHHhCCCCCCCHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhhccc
Confidence 5799999999999999999999999999999999999999999999999999999999999999999765543
No 41
>PF00226 DnaJ: DnaJ domain; InterPro: IPR001623 The prokaryotic heat shock protein DnaJ interacts with the chaperone hsp70-like DnaK protein []. Structurally, the DnaJ protein consists of an N-terminal conserved domain (called 'J' domain) of about 70 amino acids, a glycine-rich region ('G' domain') of about 30 residues, a central domain containing four repeats of a CXXCXGXG motif ('CRR' domain) and a C-terminal region of 120 to 170 residues. Such a structure is shown in the following schematic representation: +------------+-+-------+-----+-----------+--------------------------------+ | N-terminal | | Gly-R | | CXXCXGXG | C-terminal | +------------+-+-------+-----+-----------+--------------------------------+ It is thought that the 'J' domain of DnaJ mediates the interaction with the dnaK protein and consists of four helices, the second of which has a charged surface that includes at least one pair of basic residues that are essential for interaction with the ATPase domain of Hsp70. The J- and CRR-domains are found in many prokaryotic and eukaryotic proteins [], either together or separately. In yeast, J-domains have been classified into 3 groups; the class III proteins are functionally distinct and do not appear to act as molecular chaperones []. ; GO: 0031072 heat shock protein binding; PDB: 2GUZ_C 2L6L_A 1HDJ_A 2EJ7_A 1FPO_C 2CUG_A 2QSA_A 2OCH_A 3BVO_B 3APQ_A ....
Probab=99.72 E-value=5.8e-18 Score=129.47 Aligned_cols=63 Identities=54% Similarity=0.979 Sum_probs=59.8
Q ss_pred CcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCh-hHHHHHHHHHHHHHhhhhhhhhhhhc
Q 012891 83 DPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNP-SAKRKFQEIRDAYETLRDSEKRAQYD 145 (454)
Q Consensus 83 ~~Y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~-~a~~~f~~i~~Ay~vL~d~~~r~~yd 145 (454)
|||+||||+++++.++||++|+++++++|||++..+. .+.+.|+.|++||++|+||.+|+.||
T Consensus 1 ~~y~iLgl~~~~~~~eik~~y~~l~~~~HPD~~~~~~~~~~~~~~~i~~Ay~~L~~~~~R~~YD 64 (64)
T PF00226_consen 1 NPYEILGLPPDASDEEIKKAYRRLSKQYHPDKNSGDEAEAEEKFARINEAYEILSDPERRRRYD 64 (64)
T ss_dssp HHHHHCTSTTTSSHHHHHHHHHHHHHHTSTTTGTSTHHHHHHHHHHHHHHHHHHHSHHHHHHHH
T ss_pred ChHHHCCCCCCCCHHHHHHHHHhhhhccccccchhhhhhhhHHHHHHHHHHHHhCCHHHHHhcC
Confidence 5899999999999999999999999999999988665 58899999999999999999999998
No 42
>KOG0718 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.71 E-value=5.9e-18 Score=169.44 Aligned_cols=75 Identities=40% Similarity=0.721 Sum_probs=68.4
Q ss_pred CCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCC---hhHHHHHHHHHHHHHhhhhhhhhhhhcccccCCCCC
Q 012891 80 SKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNN---PSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSEN 154 (454)
Q Consensus 80 ~~~~~Y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~---~~a~~~f~~i~~Ay~vL~d~~~r~~yd~~~~~g~~~ 154 (454)
.+.|||.+|+|+++||.+|||+|||++++.|||||..+. ..|++.|+.|.+||||||||.+|++||.+|++|...
T Consensus 7 ~e~e~Ya~LNlpkdAt~eeI~~AYrr~~~lfHPDkh~dpd~K~~AE~~F~~i~~AyEVLsDp~kRaIYD~~G~qGL~t 84 (546)
T KOG0718|consen 7 DEIELYALLNLPKDATDEEIKKAYRRLSRLFHPDKHTDPDQKKAAEEKFQRIQRAYEVLSDPQKRAIYDNYGEQGLKT 84 (546)
T ss_pred chhhHHHHhCCCcccCHHHHHHHHHHHHHhcCCcccCChhHHHHHHHHHHHHHHHHHHhcChHHHHHHHHhhhccccc
Confidence 456999999999999999999999999999999998732 248999999999999999999999999999988763
No 43
>PTZ00341 Ring-infected erythrocyte surface antigen; Provisional
Probab=99.71 E-value=7e-18 Score=182.37 Aligned_cols=74 Identities=31% Similarity=0.508 Sum_probs=68.1
Q ss_pred CCCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHhhhhhhhhhhhcccccCCCC
Q 012891 79 SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSE 153 (454)
Q Consensus 79 ~~~~~~Y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yd~~~~~g~~ 153 (454)
....+||+||||+++||..|||+|||+||++||||+++++ .|.++|++|++||+|||||.+|+.||++|..|..
T Consensus 570 ~~d~dYYdILGVs~dAS~~EIKKAYRKLAlkyHPDKN~~~-~A~ekFq~I~EAYeVLSDp~kRk~YD~~G~~Gl~ 643 (1136)
T PTZ00341 570 IPDTLFYDILGVGVNADMKEISERYFKLAENYYPPKRSGN-EGFHKFKKINEAYQILGDIDKKKMYNKFGYDGIK 643 (1136)
T ss_pred CCCCChHHHcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCc-hHHHHHHHHHHHHHHhCCHHHHHHHhhccccccC
Confidence 3468999999999999999999999999999999999864 6888999999999999999999999999876643
No 44
>KOG0717 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.70 E-value=1.1e-17 Score=167.40 Aligned_cols=71 Identities=49% Similarity=0.743 Sum_probs=66.0
Q ss_pred CCCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCC-hhHHHHHHHHHHHHHhhhhhhhhhhhccccc
Q 012891 79 SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNN-PSAKRKFQEIRDAYETLRDSEKRAQYDRRRS 149 (454)
Q Consensus 79 ~~~~~~Y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~-~~a~~~f~~i~~Ay~vL~d~~~r~~yd~~~~ 149 (454)
.+.+.||+||||.++|++.|||++||+||++||||+|+.. .+|.++|+.|+.||+|||||..|+.||.+..
T Consensus 5 ~~~~c~YE~L~v~~~a~d~eik~~YRklALq~HPDknpd~ieeat~~F~~i~aAYeVLSdp~eR~wyd~hre 76 (508)
T KOG0717|consen 5 FKKRCYYEVLGVERDADDDEIKKNYRKLALQYHPDKNPDRIEEATQQFQLIQAAYEVLSDPQERAWYDSHRE 76 (508)
T ss_pred hhhhHHHHHhcccccCCHHHHHHHHHHHHHhhCCCCCCccHHHHHHHHHHHHHHHHHhcChHhhhhHHHHHH
Confidence 4567999999999999999999999999999999998755 4689999999999999999999999999876
No 45
>KOG0719 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.65 E-value=1.4e-16 Score=146.85 Aligned_cols=69 Identities=48% Similarity=0.798 Sum_probs=63.8
Q ss_pred CCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCC--CChhHHHHHHHHHHHHHhhhhhhhhhhhcccc
Q 012891 80 SKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANK--NNPSAKRKFQEIRDAYETLRDSEKRAQYDRRR 148 (454)
Q Consensus 80 ~~~~~Y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~--~~~~a~~~f~~i~~Ay~vL~d~~~r~~yd~~~ 148 (454)
..+|+|+||||.++|+..+|++|||+||+++|||+++ ...+|.++|+.++.||.||+|.++|+.||..|
T Consensus 12 ~~~d~YevLGVer~a~~~eIrkAY~klal~~HPDk~~eed~~ea~~kFq~l~k~y~iLsDeekR~~YDetG 82 (264)
T KOG0719|consen 12 NKKDLYEVLGVERDATDKEIRKAYHKLALRLHPDKNHEEDKVEATEKFQQLQKAYQILSDEEKRAVYDETG 82 (264)
T ss_pred cccCHHHHhhhcccCCHHHHHHHHHHHHHHhCCCcchhhhHHHHHHHHHHHHHHHHHhhHHHHHHHHhccC
Confidence 3469999999999999999999999999999999994 34568999999999999999999999999985
No 46
>smart00271 DnaJ DnaJ molecular chaperone homology domain.
Probab=99.63 E-value=3.7e-16 Score=117.70 Aligned_cols=59 Identities=58% Similarity=0.901 Sum_probs=54.6
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCC-ChhHHHHHHHHHHHHHhhhhhhh
Q 012891 82 RDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKN-NPSAKRKFQEIRDAYETLRDSEK 140 (454)
Q Consensus 82 ~~~Y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~-~~~a~~~f~~i~~Ay~vL~d~~~ 140 (454)
+|||+||||+++++.++||+||++|++++|||++++ .+.+.+.|++|++||++|+||.+
T Consensus 1 ~~~y~vLgl~~~~~~~~ik~ay~~l~~~~HPD~~~~~~~~~~~~~~~l~~Ay~~L~~~~~ 60 (60)
T smart00271 1 TDYYEILGVPRDASLDEIKKAYRKLALKYHPDKNPGDKEEAEEKFKEINEAYEVLSDPEK 60 (60)
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchHHHHHHHHHHHHHHHHHcCCCC
Confidence 489999999999999999999999999999999986 56788999999999999999853
No 47
>COG0484 DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]
Probab=99.62 E-value=2.4e-15 Score=150.36 Aligned_cols=133 Identities=28% Similarity=0.578 Sum_probs=99.0
Q ss_pred EEEEEEEeeccccCcceeee--eceeecccCCCCCCccCCCc-------cccCCCccccceEEeCCccccCCCCCCceEE
Q 012891 206 QVELVLSFAEAAKGCTKHVS--FDAFVPCDSCHGRGFPADAK-------TKICSTCRGIGRVTIPPFTSTCSTCKGLGRI 276 (454)
Q Consensus 206 ~~~l~itlee~~~G~~k~v~--~~~~~~C~~C~G~G~~~~~~-------~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~ 276 (454)
+.++.++-...+.-|.-+-. -+..+.|++|+|+|.....+ ..+|+.|+|+|.+ +..+|..|+|.|++
T Consensus 134 ~~~i~~~~~~~C~~C~GsGak~gt~~~tC~tC~G~G~v~~~~~~g~~~~~~~C~~C~G~G~~----i~~pC~~C~G~G~v 209 (371)
T COG0484 134 KKEIRVTRSVTCSTCHGSGAKPGTDPKTCPTCNGSGQVRTVQRTGFFSFQQTCPTCNGTGKI----IKDPCGKCKGKGRV 209 (371)
T ss_pred eeeEecceeeECCcCCCCCCCCCCCCCcCCCCCCcCeEEEEEeeeEEEEEEECCCCccceeE----CCCCCCCCCCCCeE
Confidence 34566666665554443321 12568999999999754333 6799999999998 57899999999997
Q ss_pred eeeecccccCC-ceeeceE-------------------------------------------------------------
Q 012891 277 IKDHCMTCKGS-GVVDGVK------------------------------------------------------------- 294 (454)
Q Consensus 277 ~~~~C~~C~g~-G~~~~~~------------------------------------------------------------- 294 (454)
.+..-.+++.. |+.++++
T Consensus 210 ~~~~~i~V~IPaGv~~g~~ir~~g~G~~g~~Ggp~GDLyv~i~v~~h~~F~R~g~dL~~~~~Is~~~AalG~~i~vptl~ 289 (371)
T COG0484 210 KKKKSISVNIPAGVDDGDRIRLSGEGEAGPNGGPAGDLYVFVHVKPHPIFERDGDDLYCEVPISFTEAALGGEIEVPTLD 289 (371)
T ss_pred eeeeEEEEECCCCCccCCEEEEecCcccCCCCCCCccEEEEEEeecCCCeEECCCceEeccccCHHHHhcCCEEEEEecC
Confidence 66555555543 3333322
Q ss_pred -EEEEEecCccCCCCEEEECCCcCCCCCCCCCccEEEEEEEecCCcccc
Q 012891 295 -EVKVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSR 342 (454)
Q Consensus 295 -~~~V~Ip~G~~~G~~i~~~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R 342 (454)
.++|.||||+++|++++|+|+|.+...+...|||||+|+|.-...+..
T Consensus 290 g~~~l~ip~Gtq~G~~~rl~gkG~p~~~~~~~GDl~v~v~v~~P~~ls~ 338 (371)
T COG0484 290 GRVKLKIPAGTQTGEVFRLRGKGMPKLRSGGRGDLYVRVKVETPKNLSD 338 (371)
T ss_pred CCEEEecCCCCccCcEEEEcCCCccccCCCCcCCEEEEEEEEcCCCCCH
Confidence 678999999999999999999999877777899999999996665433
No 48
>cd06257 DnaJ DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification.
Probab=99.60 E-value=1.5e-15 Score=112.32 Aligned_cols=55 Identities=56% Similarity=0.985 Sum_probs=51.7
Q ss_pred CcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHhhhh
Q 012891 83 DPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRD 137 (454)
Q Consensus 83 ~~Y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d 137 (454)
|||++|||+++++.++||++|++|++++|||++.+.+.+.+.|++|++||++|+|
T Consensus 1 ~~y~vLgl~~~~~~~~ik~~y~~l~~~~HPD~~~~~~~~~~~~~~l~~Ay~~L~d 55 (55)
T cd06257 1 DYYDILGVPPDASDEEIKKAYRKLALKYHPDKNPDDPEAEEKFKEINEAYEVLSD 55 (55)
T ss_pred ChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHhcC
Confidence 6999999999999999999999999999999997556788999999999999986
No 49
>PHA03102 Small T antigen; Reviewed
Probab=99.59 E-value=1.1e-15 Score=135.64 Aligned_cols=66 Identities=24% Similarity=0.466 Sum_probs=60.7
Q ss_pred CCcccccCCCCCC--CHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHhhhhhhhhhhhcccccCC
Q 012891 82 RDPYELLGVPENA--SQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRG 151 (454)
Q Consensus 82 ~~~Y~iLgv~~~a--~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yd~~~~~g 151 (454)
..+|+||||+++| |.+|||+|||++|+++|||++++ +++|++|++||++|+|+.+|..||.+|...
T Consensus 5 ~~l~~vLGl~~~A~~s~~eIKkAYr~la~~~HPDkgg~----~e~~k~in~Ay~~L~d~~~r~~yd~~g~~~ 72 (153)
T PHA03102 5 KELMDLLGLPRSAWGNLPLMRKAYLRKCLEFHPDKGGD----EEKMKELNTLYKKFRESVKSLRDLDGEEDS 72 (153)
T ss_pred HHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCch----hHHHHHHHHHHHHHhhHHHhccccccCCcc
Confidence 5789999999999 99999999999999999999764 479999999999999999999999997543
No 50
>KOG0624 consensus dsRNA-activated protein kinase inhibitor P58, contains TPR and DnaJ domains [Defense mechanisms]
Probab=99.59 E-value=1.6e-15 Score=147.52 Aligned_cols=69 Identities=48% Similarity=0.747 Sum_probs=63.8
Q ss_pred CCCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCh---hHHHHHHHHHHHHHhhhhhhhhhhhccc
Q 012891 79 SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNP---SAKRKFQEIRDAYETLRDSEKRAQYDRR 147 (454)
Q Consensus 79 ~~~~~~Y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~---~a~~~f~~i~~Ay~vL~d~~~r~~yd~~ 147 (454)
+..+|||.||||.++|+..||-||||+||.+||||...+.. .|+++|..|..|-|||+||++|+.||..
T Consensus 391 s~kRDYYKILGVkRnAsKqEI~KAYRKlAqkWHPDNFqdEeEKKkAEKKFIDIAAAKEVLsd~EkRrqFDnG 462 (504)
T KOG0624|consen 391 SGKRDYYKILGVKRNASKQEITKAYRKLAQKWHPDNFQDEEEKKKAEKKFIDIAAAKEVLSDPEKRRQFDNG 462 (504)
T ss_pred hccchHHHHhhhcccccHHHHHHHHHHHHHhcCCccccCHHHHHHHHHhhhhHHHHHHhhcCHHHHhhccCC
Confidence 45689999999999999999999999999999999998644 2889999999999999999999999985
No 51
>KOG0721 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.57 E-value=2.4e-15 Score=137.73 Aligned_cols=71 Identities=37% Similarity=0.665 Sum_probs=65.1
Q ss_pred CCCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHhhhhhhhhhhhccccc
Q 012891 79 SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRS 149 (454)
Q Consensus 79 ~~~~~~Y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yd~~~~ 149 (454)
....|||+||||+++||..|||+|||+|.++|||||++...+.++.|..|++||+.|+|+..|..|..||.
T Consensus 96 ~~~fDPyEILGl~pgas~~eIKkaYR~LSik~HPDK~~~~~~~e~~~~~I~KAY~aLTD~~sreN~ekYG~ 166 (230)
T KOG0721|consen 96 RQKFDPYEILGLDPGASEKEIKKAYRRLSIKYHPDKQPPEEGDEEFFEAIAKAYQALTDKKSRENWEKYGN 166 (230)
T ss_pred hhcCCcHHhhCCCCCCCHHHHHHHHHHhhhhhCCCcCCCcchhHHHHHHHHHHHHHhcchhhHHHHHHhCC
Confidence 34579999999999999999999999999999999998645667889999999999999999999999964
No 52
>PRK05014 hscB co-chaperone HscB; Provisional
Probab=99.47 E-value=5.5e-14 Score=128.29 Aligned_cols=66 Identities=32% Similarity=0.539 Sum_probs=58.8
Q ss_pred CCcccccCCCCC--CCHHHHHHHHHHHHHHhCCCCCCCChh-----HHHHHHHHHHHHHhhhhhhhhhhhccc
Q 012891 82 RDPYELLGVPEN--ASQDEIKKAFHMLAKQYHPDANKNNPS-----AKRKFQEIRDAYETLRDSEKRAQYDRR 147 (454)
Q Consensus 82 ~~~Y~iLgv~~~--a~~~eIk~ayr~la~~~HPD~~~~~~~-----a~~~f~~i~~Ay~vL~d~~~r~~yd~~ 147 (454)
+|||++|||++. ++..+|+++||+|++++|||+..+.+. +.+.|+.||+||++|+||.+|+.|+-.
T Consensus 1 ~~yf~llgl~~~~~~d~~~L~~~yr~l~~~~HPDk~~~~~~~~~~~a~~~s~~iN~AY~~L~dp~~Ra~Yll~ 73 (171)
T PRK05014 1 MDYFTLFGLPARYDIDTQLLASRYQELQRQFHPDKFANASERERLLAVQQAATINDAYQTLKHPLKRAEYLLS 73 (171)
T ss_pred CCHHHHCCCCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCcHHHHHHHHHHHHHHHHHHHHHCChhHHHHHHHH
Confidence 489999999995 788999999999999999999865443 567899999999999999999999864
No 53
>PRK01356 hscB co-chaperone HscB; Provisional
Probab=99.45 E-value=9e-14 Score=126.15 Aligned_cols=67 Identities=30% Similarity=0.510 Sum_probs=58.4
Q ss_pred CCcccccCCCCC--CCHHHHHHHHHHHHHHhCCCCCCCChh---HHHHHHHHHHHHHhhhhhhhhhhhcccc
Q 012891 82 RDPYELLGVPEN--ASQDEIKKAFHMLAKQYHPDANKNNPS---AKRKFQEIRDAYETLRDSEKRAQYDRRR 148 (454)
Q Consensus 82 ~~~Y~iLgv~~~--a~~~eIk~ayr~la~~~HPD~~~~~~~---a~~~f~~i~~Ay~vL~d~~~r~~yd~~~ 148 (454)
.|||++|||++. ++..+|+++||+|++++|||++.+..+ +.+.+..||+||++|+||.+|+.|+...
T Consensus 2 ~~yf~llgl~~~f~id~~~L~~aYr~lq~~~HPDk~~~~~~k~~~~~~s~~in~AY~~L~dp~~Ra~YlL~l 73 (166)
T PRK01356 2 QNYFQLLGLPQEYNIDLKILEKQYFAMQVKYHPDKAKTLQEKEQNLIIASELNNAYSTLKDALKRAEYMLLL 73 (166)
T ss_pred CCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHc
Confidence 589999999996 789999999999999999999874332 3345789999999999999999998764
No 54
>PRK03578 hscB co-chaperone HscB; Provisional
Probab=99.44 E-value=1.4e-13 Score=125.94 Aligned_cols=67 Identities=31% Similarity=0.513 Sum_probs=59.0
Q ss_pred CCCcccccCCCCC--CCHHHHHHHHHHHHHHhCCCCCCCChhHHH-----HHHHHHHHHHhhhhhhhhhhhccc
Q 012891 81 KRDPYELLGVPEN--ASQDEIKKAFHMLAKQYHPDANKNNPSAKR-----KFQEIRDAYETLRDSEKRAQYDRR 147 (454)
Q Consensus 81 ~~~~Y~iLgv~~~--a~~~eIk~ayr~la~~~HPD~~~~~~~a~~-----~f~~i~~Ay~vL~d~~~r~~yd~~ 147 (454)
..|||++|||++. ++..+|+++||+|++++|||++.+.+.+++ .++.||+||++|+||.+|+.|+..
T Consensus 5 ~~dyf~llglp~~f~~d~~~L~~~yr~lq~~~HPD~~~~~~~~e~~~a~~~s~~iN~AY~tL~~p~~Ra~Yll~ 78 (176)
T PRK03578 5 KDDHFSLFGLPARFALDEAALDAAYRTVQAQVHPDRFAAAGDAEKRVAMQWATRANEAYQTLRDPLKRARYLLH 78 (176)
T ss_pred CCCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhCChhhHHHHHHH
Confidence 4799999999995 689999999999999999999876655443 458999999999999999999964
No 55
>PRK00294 hscB co-chaperone HscB; Provisional
Probab=99.44 E-value=1.7e-13 Score=124.96 Aligned_cols=69 Identities=23% Similarity=0.435 Sum_probs=61.3
Q ss_pred CCCCcccccCCCCC--CCHHHHHHHHHHHHHHhCCCCCCCChh-----HHHHHHHHHHHHHhhhhhhhhhhhcccc
Q 012891 80 SKRDPYELLGVPEN--ASQDEIKKAFHMLAKQYHPDANKNNPS-----AKRKFQEIRDAYETLRDSEKRAQYDRRR 148 (454)
Q Consensus 80 ~~~~~Y~iLgv~~~--a~~~eIk~ayr~la~~~HPD~~~~~~~-----a~~~f~~i~~Ay~vL~d~~~r~~yd~~~ 148 (454)
...|||++||+++. .+..+|+++||+|++++|||++.+.+. +.+.|..||+||++|+||.+|+.|+...
T Consensus 2 ~~~~~F~l~~l~~~f~id~~~L~~~Yr~Lq~~~HPDk~~~~~~~e~~~a~~~s~~IN~AY~~L~~p~~Ra~YlL~l 77 (173)
T PRK00294 2 GTPCHFALFDLQPSFRLDLDQLATRYRELAREVHPDRFADAPEREQRLALERSASLNEAYQTLKSPPRRARYLLAL 77 (173)
T ss_pred CCCChhhhcCcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCcHHHHHHHHHHHHHHHHHHHHhCChhhhHHHHHHh
Confidence 35799999999996 778999999999999999999876553 5668999999999999999999999753
No 56
>PRK14282 chaperone protein DnaJ; Provisional
Probab=99.44 E-value=3.9e-13 Score=137.53 Aligned_cols=140 Identities=25% Similarity=0.468 Sum_probs=98.4
Q ss_pred EEEEEEeeccccCcceeee--eceeecccCCCCCCccCC---------CccccCCCccccceEEeCCccccCCCCCCceE
Q 012891 207 VELVLSFAEAAKGCTKHVS--FDAFVPCDSCHGRGFPAD---------AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGR 275 (454)
Q Consensus 207 ~~l~itlee~~~G~~k~v~--~~~~~~C~~C~G~G~~~~---------~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~ 275 (454)
..+.++-...+..|.-+-. -.....|+.|+|+|.... ....+|+.|+|.|.+ +...|..|+|.|.
T Consensus 145 ~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~----~~~~C~~C~G~g~ 220 (369)
T PRK14282 145 IPVEYDRYETCPHCGGTGVEPGSGYVTCPKCHGTGRIREERRSFFGVFVSERTCERCGGTGKI----PGEYCHECGGSGR 220 (369)
T ss_pred EEEEeeecccCCCCCccCCCCCCCCcCCCCCCCcCEEEEEEEccCcceEEEEECCCCCCccee----CCCCCCCCCCcee
Confidence 4455555555544433221 123468999999997532 135699999999987 4678999999997
Q ss_pred EeeeecccccCC-ceeeceE------------------------------------------------------------
Q 012891 276 IIKDHCMTCKGS-GVVDGVK------------------------------------------------------------ 294 (454)
Q Consensus 276 ~~~~~C~~C~g~-G~~~~~~------------------------------------------------------------ 294 (454)
+.+..-.++... |+..+.+
T Consensus 221 v~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDl~i~i~v~~h~~F~r~G~DL~~~~~Isl~eAl~G~~~~i~~l 300 (369)
T PRK14282 221 IRRRVRTTVKIPAGVEDGTVLRITGGGNAGYYGGPYGDLYVIVRVRPDPRFKRSGSDLIYDVTIDYLQAILGTTVEVPLP 300 (369)
T ss_pred EEEEEEEEEEeCCCCCCCCEEEEecccCCCCCCCCCCCEEEEEEEecCCcEEEecCCEEEEEEeCHHHHhCCCEEEEeCC
Confidence 643221111111 1111110
Q ss_pred ---EEEEEecCccCCCCEEEECCCcCCCCCCCCCccEEEEEEEecCCcccccCCCeEEE
Q 012891 295 ---EVKVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVD 350 (454)
Q Consensus 295 ---~~~V~Ip~G~~~G~~i~~~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~~~ 350 (454)
+++|.||+|+++|++++|+|+|++...+..+|||||+|+|..|+.|.+++.+|+.+
T Consensus 301 dG~~i~v~Ip~g~~~g~~iri~GkG~p~~~~~~~GDL~V~~~v~~P~~l~~~~~~ll~~ 359 (369)
T PRK14282 301 EGGTTMLKIPPGTQPETVFRLKGKGLPNMRYGRRGDLIVNVHVEIPKRLSREERKLLKE 359 (369)
T ss_pred CCcEEEEEeCCCcCCCCEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHH
Confidence 58999999999999999999999864445689999999999999999999888654
No 57
>PRK14290 chaperone protein DnaJ; Provisional
Probab=99.40 E-value=8.4e-13 Score=134.92 Aligned_cols=140 Identities=21% Similarity=0.509 Sum_probs=98.1
Q ss_pred EEEEEeeccccCcceeee-eceeecccCCCCCCccCCC---------ccccCCCccccceEEeCCccccCCCCCCceEEe
Q 012891 208 ELVLSFAEAAKGCTKHVS-FDAFVPCDSCHGRGFPADA---------KTKICSTCRGIGRVTIPPFTSTCSTCKGLGRII 277 (454)
Q Consensus 208 ~l~itlee~~~G~~k~v~-~~~~~~C~~C~G~G~~~~~---------~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~ 277 (454)
.+.+.....+..|...-. ......|+.|+|+|..... ...+|+.|+|.|.+ ....|+.|+|+|.+.
T Consensus 143 ~i~~~r~~~C~~C~G~g~~~~~~~~C~~C~G~G~~~~~~~~g~~~~~~~~~C~~C~G~G~~----~~~~C~~C~G~g~v~ 218 (365)
T PRK14290 143 RIKYRRNAMCPDCSGTGAKNGKLITCPTCHGTGQQRIVRGQGFFRMVTVTTCRTCGGRGRI----PEEKCPRCNGTGTVV 218 (365)
T ss_pred EEEeeecccCCCCccccCCCCCCccCCCCCCcCEEEEEeccCeEEEEEEEeCCCCCCceeE----ccCCCCCCCCceeEE
Confidence 445554554433322211 1245689999999964321 24689999999987 467899999999864
Q ss_pred eeecccccCC-ceeeceE------------------------------------------------------------EE
Q 012891 278 KDHCMTCKGS-GVVDGVK------------------------------------------------------------EV 296 (454)
Q Consensus 278 ~~~C~~C~g~-G~~~~~~------------------------------------------------------------~~ 296 (454)
+..-.+.... |+..+.+ ++
T Consensus 219 ~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~~~GDL~v~v~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~I~~~~g~i 298 (365)
T PRK14290 219 VNEDISVKIPKGATDNLRLRVKGKGQSYGGRTGDLYVVLRVNNDPNIQRINDDLYVDQKINFPQAALGGEIEIKLFREKY 298 (365)
T ss_pred EeeEEEEEECCCCCCCcEEEEccccCCCCCCCCCEEEEEEEcCCCCEEEecCCEEEEEEeCHHHHhCCCEEEEEcCCceE
Confidence 4222222211 1111111 68
Q ss_pred EEEecCccCCCCEEEECCCcCCCCCCCCCccEEEEEEEecCCcccccCCCeEEEE
Q 012891 297 KVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDS 351 (454)
Q Consensus 297 ~V~Ip~G~~~G~~i~~~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~~~~ 351 (454)
+|.||+|+++|++++|+|+|++...+..+|||||+|+|..++.|++++.+|+.++
T Consensus 299 ~V~Ip~g~~~g~~iri~g~G~p~~~~~~~GDL~V~~~V~~P~~l~~~~~~ll~~~ 353 (365)
T PRK14290 299 NLKIPEGTQPGEVLKIKGAGMPHLNGHGSGDLLVRINVEVPKRLTSKQKELIREF 353 (365)
T ss_pred EEEECCccCCCcEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHH
Confidence 9999999999999999999998655556899999999999999999998887653
No 58
>PRK14298 chaperone protein DnaJ; Provisional
Probab=99.38 E-value=1.2e-12 Score=134.05 Aligned_cols=141 Identities=25% Similarity=0.504 Sum_probs=98.2
Q ss_pred EEEEEEeeccccCcceeee--eceeecccCCCCCCccCC---------CccccCCCccccceEEeCCccccCCCCCCceE
Q 012891 207 VELVLSFAEAAKGCTKHVS--FDAFVPCDSCHGRGFPAD---------AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGR 275 (454)
Q Consensus 207 ~~l~itlee~~~G~~k~v~--~~~~~~C~~C~G~G~~~~---------~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~ 275 (454)
..+.++....+..|.-.-. -.....|+.|+|+|.... ....+|+.|+|+|.+ +...|+.|+|.|.
T Consensus 134 ~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~----~~~~C~~C~G~g~ 209 (377)
T PRK14298 134 KDIDVPRAERCSTCSGTGAKPGTSPKRCPTCGGTGQVTTTRSTPLGQFVTTTTCSTCHGRGQV----IESPCPVCSGTGK 209 (377)
T ss_pred EEEEEEeeccCCCCCCCcccCCCCCCcCCCCCCccEEEEEEecCceeEEEEEeCCCCCCCCcc----cCCCCCCCCCccE
Confidence 4455555555543333221 123467999999996532 235689999999987 3567999999998
Q ss_pred EeeeecccccCC-ceeeceE------------------------------------------------------------
Q 012891 276 IIKDHCMTCKGS-GVVDGVK------------------------------------------------------------ 294 (454)
Q Consensus 276 ~~~~~C~~C~g~-G~~~~~~------------------------------------------------------------ 294 (454)
+.+..-...... |+..+.+
T Consensus 210 v~~~~~l~V~IppG~~~G~~i~~~g~G~~~~~~~~~GDL~i~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tl 289 (377)
T PRK14298 210 VRKTRKITVNVPAGADSGLRLKLSGEGEAGSPGAPSGDLYIVLHVKEHDYFERVGDDIISEIPISFTQAALGADIMVPTL 289 (377)
T ss_pred EEEEEEEEecCCCCCCCCCEEEEecccCCCCCCCCCcCEEEEEEEecCCCeEEEcCcEEEEEEeCHHHHhCCCeEEEecC
Confidence 754322222211 2211111
Q ss_pred --EEEEEecCccCCCCEEEECCCcCCCCCCCCCccEEEEEEEecCCcccccCCCeEEEE
Q 012891 295 --EVKVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDS 351 (454)
Q Consensus 295 --~~~V~Ip~G~~~G~~i~~~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~~~~ 351 (454)
.++|.||+|+++|++++|+|+|.+...+...|||||+|+|..++.+.+++.+|+.++
T Consensus 290 dG~i~v~ip~g~~~g~~lri~g~G~p~~~~~~~GDL~V~~~V~~P~~ls~~~~~ll~~l 348 (377)
T PRK14298 290 YGKVKMNIPPGTQTHSVFRLKDKGMPRLHGHGKGDQLVKVIVKTPTKLTQEQKELLREF 348 (377)
T ss_pred CCCEEEEeCCCcccCCEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHH
Confidence 578999999999999999999998655556799999999999988988887776543
No 59
>KOG0550 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.37 E-value=3.7e-13 Score=134.09 Aligned_cols=69 Identities=45% Similarity=0.719 Sum_probs=65.3
Q ss_pred CCCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCC-hhHHHHHHHHHHHHHhhhhhhhhhhhccc
Q 012891 79 SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNN-PSAKRKFQEIRDAYETLRDSEKRAQYDRR 147 (454)
Q Consensus 79 ~~~~~~Y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~-~~a~~~f~~i~~Ay~vL~d~~~r~~yd~~ 147 (454)
+...|||.|||+.++|+..|||+|||++|+.+|||++.++ .+++.+|++|-+||.+|+||.+|..||..
T Consensus 370 SkRkd~ykilGi~~~as~~eikkayrk~AL~~Hpd~~agsq~eaE~kFkevgeAy~il~d~~kr~r~dsg 439 (486)
T KOG0550|consen 370 SKRKDWYKILGISRNASDDEIKKAYRKLALVHHPDKNAGSQKEAEAKFKEVGEAYTILSDPMKRVRFDSG 439 (486)
T ss_pred hhhhhHHHHhhhhhhcccchhhhHHHHHHHHhCCCcCcchhHHHHHHHHHHHHHHHHhcCHHHHhhcccc
Confidence 4568999999999999999999999999999999999887 67899999999999999999999999985
No 60
>PRK14294 chaperone protein DnaJ; Provisional
Probab=99.36 E-value=1.8e-12 Score=132.57 Aligned_cols=118 Identities=29% Similarity=0.599 Sum_probs=88.6
Q ss_pred eecccCCCCCCccCC-----CccccCCCccccceEEeCCccccCCCCCCceEEeeeecccccCC-ceeeceE--------
Q 012891 229 FVPCDSCHGRGFPAD-----AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTCKGS-GVVDGVK-------- 294 (454)
Q Consensus 229 ~~~C~~C~G~G~~~~-----~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~C~~C~g~-G~~~~~~-------- 294 (454)
...|+.|+|+|.... ....+|+.|+|.|.. +...|..|+|.|.+.+..=.+.... |+..+.+
T Consensus 161 ~~~C~~C~G~G~~~~~~G~~~~~~~C~~C~G~G~~----~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~~i~~~g~G~ 236 (366)
T PRK14294 161 PTTCPQCGGSGQVTQSQGFFSIRTTCPRCRGMGKV----IVSPCKTCHGQGRVRVSKTVQVKIPAGVDTGSRLRLRGEGE 236 (366)
T ss_pred cccCCCcCCeEEEEEEeeeEEEEeeCCCCCCcCee----cCcCCCCCCCceEeecceeEEEecCCCCcCCcEEEEccCcc
Confidence 468999999997531 135799999999987 4578999999998753221111111 1111111
Q ss_pred ------------------------------------------------------EEEEEecCccCCCCEEEECCCcCCCC
Q 012891 295 ------------------------------------------------------EVKVTIPAGVDSGDTIRVPEAGNAGG 320 (454)
Q Consensus 295 ------------------------------------------------------~~~V~Ip~G~~~G~~i~~~g~G~~~~ 320 (454)
.++|.||+|+++|++++|+|+|++..
T Consensus 237 ~~~~~~~~GDl~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tldG~~~v~ip~g~~~g~~iri~G~G~p~~ 316 (366)
T PRK14294 237 AGVRGGPPGDLYVFLTVEPHEFFERDGNDVHCKVPISFVQAALGAQIEVPTLEGERELKIPKGTQPGDIFRFKGKGIPSL 316 (366)
T ss_pred CCCCCCCCCcEEEEEEEccCCcceecCCCEEEEEEeCHHHHhCCCeEEEECCCCcEEEEECCCcCCCCEEEECCCCCCCC
Confidence 46899999999999999999999865
Q ss_pred CCCCCccEEEEEEEecCCcccccCCCeEEE
Q 012891 321 RGRQHGNLFIKLKVADDPIFSRDGADVYVD 350 (454)
Q Consensus 321 ~g~~~GDL~v~i~v~~h~~f~R~G~DL~~~ 350 (454)
.+..+|||||+|+|..|+.|.++..+|+..
T Consensus 317 ~~~~~GDL~V~~~v~~P~~l~~~q~~ll~~ 346 (366)
T PRK14294 317 RGGGRGDQIIEVEVKVPTRLTKKQEELLTE 346 (366)
T ss_pred CCCCCCCEEEEEEEECCCCCCHHHHHHHHH
Confidence 555689999999999999999888777654
No 61
>KOG0720 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.35 E-value=6.3e-13 Score=133.79 Aligned_cols=67 Identities=36% Similarity=0.600 Sum_probs=64.5
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHhhhhhhhhhhhcccc
Q 012891 81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRR 148 (454)
Q Consensus 81 ~~~~Y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yd~~~ 148 (454)
..|+|.+|||+.++|+++|||.||++|...|||||. .+.|+|.|+.++.|||+|+|+.+|..||...
T Consensus 234 ~~daYsvlGl~~d~sd~~lKk~Yrk~A~LVhPDKn~-~~~A~Eafk~Lq~Afevig~~~kR~eYd~e~ 300 (490)
T KOG0720|consen 234 ILDAYSALGLPSDCSDADLKKNYRKKAMLVHPDKNM-IPRAEEAFKKLQVAFEVIGDSVKRKEYDLEL 300 (490)
T ss_pred CCCchhhcCCCCCCCHHHHHHHHHhhceEeCCCccC-ChhHHHHHHHHHHHHHHhcchhhhhHHHHHH
Confidence 579999999999999999999999999999999998 6899999999999999999999999999874
No 62
>PRK14285 chaperone protein DnaJ; Provisional
Probab=99.34 E-value=2.7e-12 Score=131.04 Aligned_cols=139 Identities=22% Similarity=0.456 Sum_probs=95.9
Q ss_pred EEEEEEeeccccCcceeee--eceeecccCCCCCCccCC-----CccccCCCccccceEEeCCccccCCCCCCceEEeee
Q 012891 207 VELVLSFAEAAKGCTKHVS--FDAFVPCDSCHGRGFPAD-----AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKD 279 (454)
Q Consensus 207 ~~l~itlee~~~G~~k~v~--~~~~~~C~~C~G~G~~~~-----~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~ 279 (454)
..+.++....+..|.-.-. -.....|+.|+|+|.... ....+|+.|.|+|.+ +...|..|+|.|.+.+.
T Consensus 139 ~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~G~~~~~~~C~~C~G~G~~----~~~~C~~C~G~g~v~~~ 214 (365)
T PRK14285 139 NNINITRNMLCESCLGKKSEKGTSPSICNMCNGSGRVMQGGGFFRVTTTCPKCYGNGKI----ISNPCKSCKGKGSLKKK 214 (365)
T ss_pred EEEEeeecccCCCCCCcccCCCCCCccCCCccCceeEEecCceeEEeeecCCCCCcccc----cCCCCCCCCCCCEEecc
Confidence 4455555555544433322 123467999999996432 236799999999987 45789999999976432
Q ss_pred ecccccCC-ceeeceE---------------------------------------------------------------E
Q 012891 280 HCMTCKGS-GVVDGVK---------------------------------------------------------------E 295 (454)
Q Consensus 280 ~C~~C~g~-G~~~~~~---------------------------------------------------------------~ 295 (454)
.-.++... |+..+++ .
T Consensus 215 ~~~~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~v~i~v~~h~~f~R~G~dL~~~~~Isl~eAl~G~~~~i~tldG~~ 294 (365)
T PRK14285 215 ETIELKIPAGIDDNQQIKMRGKGSVNPDNQQYGDLYIKILIKPHKIFKRNGKDLYATLPISFTQAALGKEIKIQTIASKK 294 (365)
T ss_pred EEEEEEECCCCCCCCEEEEeeccccCCCCCCCCCEEEEEEEecCCCeEEeccceEEEEecCHHHHhCCCEEEEECCCCCE
Confidence 21111111 1111110 6
Q ss_pred EEEEecCccCCCCEEEECCCcCCCCCCCCCccEEEEEEEecCCcccccCCCeEE
Q 012891 296 VKVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYV 349 (454)
Q Consensus 296 ~~V~Ip~G~~~G~~i~~~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~~ 349 (454)
++|.||+|+++|++++|+|+|++...+...|||||+|+|..|+.|.+++..|+-
T Consensus 295 v~V~Ip~g~~~g~~irl~GkG~p~~~~~~~GDL~V~~~v~~P~~l~~~q~~~l~ 348 (365)
T PRK14285 295 IKIKIPKGTENDEQIIIKNEGMPILHTEKFGNLILIIKIKTPKNLNSNAIKLLE 348 (365)
T ss_pred EEEEeCCCcCCCcEEEECCCCccCCCCCCCCCEEEEEEEECCCCCCHHHHHHHH
Confidence 899999999999999999999986554557999999999999999887765543
No 63
>PRK10767 chaperone protein DnaJ; Provisional
Probab=99.33 E-value=3.2e-12 Score=131.05 Aligned_cols=141 Identities=24% Similarity=0.505 Sum_probs=98.6
Q ss_pred EEEEEEeeccccCcceeeee--ceeecccCCCCCCccCC-----CccccCCCccccceEEeCCccccCCCCCCceEEeee
Q 012891 207 VELVLSFAEAAKGCTKHVSF--DAFVPCDSCHGRGFPAD-----AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKD 279 (454)
Q Consensus 207 ~~l~itlee~~~G~~k~v~~--~~~~~C~~C~G~G~~~~-----~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~ 279 (454)
..+.++....+..|.-.-.- .....|+.|+|+|.... ....+|+.|+|+|.. +...|+.|+|.|.+.+.
T Consensus 135 ~~v~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~----~~~~C~~C~G~g~v~~~ 210 (371)
T PRK10767 135 KEIRIPTLVTCDTCHGSGAKPGTSPKTCPTCHGAGQVRMQQGFFTVQQTCPTCHGRGKI----IKDPCKKCHGQGRVEKE 210 (371)
T ss_pred EEEeeeecccCCCCCCcccCCCCCCccCCCCCCeeEEEEeeceEEEEEeCCCCCCceeE----CCCCCCCCCCCceEeee
Confidence 44555555555444332221 23468999999996431 234689999999987 45779999999987543
Q ss_pred ecccccCC-ceeeceE--------------------------------------------------------------EE
Q 012891 280 HCMTCKGS-GVVDGVK--------------------------------------------------------------EV 296 (454)
Q Consensus 280 ~C~~C~g~-G~~~~~~--------------------------------------------------------------~~ 296 (454)
...++... |+..+.+ ++
T Consensus 211 ~~l~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~~ldG~i 290 (371)
T PRK10767 211 KTLSVKIPAGVDTGDRIRLSGEGEAGERGGPAGDLYVQIHVKEHPIFERDGNDLYCEVPISFTTAALGGEIEVPTLDGRV 290 (371)
T ss_pred eeEEEecCCCCCCCcEEEEecCccCCCCCCCCcCEEEEEEEeeCCCEEEecCCEEEEEEeCHHHHhCCCeEEEecCCCcE
Confidence 22222221 1111000 57
Q ss_pred EEEecCccCCCCEEEECCCcCCCCCCCCCccEEEEEEEecCCcccccCCCeEEEE
Q 012891 297 KVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDS 351 (454)
Q Consensus 297 ~V~Ip~G~~~G~~i~~~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~~~~ 351 (454)
+|.||+|+++|++++|+|+|.+...+...|||||+|+|..++.|.+++.+|+.++
T Consensus 291 ~v~ip~g~~~g~~~~i~g~G~p~~~~~~~GDL~v~~~v~~P~~l~~~~~~ll~~l 345 (371)
T PRK10767 291 KLKIPEGTQTGKLFRLRGKGVKSVRSGARGDLYCQVVVETPVNLTKRQKELLEEF 345 (371)
T ss_pred EEEeCCCCCCCCEEEECCCCcCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHH
Confidence 8999999999999999999998655556899999999999989999988886553
No 64
>PTZ00100 DnaJ chaperone protein; Provisional
Probab=99.33 E-value=1.4e-12 Score=110.06 Aligned_cols=54 Identities=26% Similarity=0.433 Sum_probs=48.4
Q ss_pred CCCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHhhh
Q 012891 79 SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLR 136 (454)
Q Consensus 79 ~~~~~~Y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~ 136 (454)
+...++|+||||+++||.+|||++||+|++++|||+++ + .+.|++|++||++|.
T Consensus 62 Ms~~eAy~ILGv~~~As~~eIkkaYRrLa~~~HPDkgG-s---~~~~~kIneAyevL~ 115 (116)
T PTZ00100 62 MSKSEAYKILNISPTASKERIREAHKQLMLRNHPDNGG-S---TYIASKVNEAKDLLL 115 (116)
T ss_pred CCHHHHHHHcCCCCCCCHHHHHHHHHHHHHHhCCCCCC-C---HHHHHHHHHHHHHHh
Confidence 44579999999999999999999999999999999864 3 468999999999995
No 65
>KOG0722 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.33 E-value=5.3e-13 Score=124.65 Aligned_cols=67 Identities=43% Similarity=0.759 Sum_probs=62.6
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHhhhhhhhhhhhcccc
Q 012891 81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRR 148 (454)
Q Consensus 81 ~~~~Y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yd~~~ 148 (454)
..|-|+||||+++|+.+||.+|||+||++||||++++ +++.+.|..|.+||++|.|...|..||-..
T Consensus 32 ~enCYdVLgV~Rea~KseIakAYRqLARrhHPDr~r~-~e~k~~F~~iAtayeilkd~e~rt~ydyal 98 (329)
T KOG0722|consen 32 AENCYDVLGVAREANKSEIAKAYRQLARRHHPDRNRD-PESKKLFVKIATAYEILKDNETRTQYDYAL 98 (329)
T ss_pred chhHHHHhhhhhhccHHHHHHHHHHHHHHhCCcccCC-chhhhhhhhhhcccccccchhhHHhHHHHh
Confidence 4688999999999999999999999999999999985 677799999999999999999999999863
No 66
>PRK14301 chaperone protein DnaJ; Provisional
Probab=99.30 E-value=6e-12 Score=128.91 Aligned_cols=137 Identities=26% Similarity=0.486 Sum_probs=92.9
Q ss_pred EEEEEEeeccccCcceeeee--ceeecccCCCCCCccCC-----CccccCCCccccceEEeCCccccCCCCCCceEEeee
Q 012891 207 VELVLSFAEAAKGCTKHVSF--DAFVPCDSCHGRGFPAD-----AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKD 279 (454)
Q Consensus 207 ~~l~itlee~~~G~~k~v~~--~~~~~C~~C~G~G~~~~-----~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~ 279 (454)
.++.++....+..|.-.-.- .....|+.|+|+|.... ....+|+.|+|.|.+. ...|+.|+|.|.+.+.
T Consensus 137 k~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~v~~~~G~~~~~~~C~~C~G~G~~~----~~~C~~C~G~g~v~~~ 212 (373)
T PRK14301 137 VTLRIPKNVTCDDCGGSGAAPGTSPETCRHCGGSGQVRQSQGFFQIAVPCPVCRGEGRVI----THPCPKCKGSGIVQQT 212 (373)
T ss_pred EEEEeeecccCCCCCCcccCCCCCCcccCCccCeeEEEEEeeeEEEEEeCCCCCceeeec----CCCCCCCCCCceeccc
Confidence 44555555555544433221 23467999999997531 2357999999999983 5679999999987432
Q ss_pred ecccccCC-ceeeceE--------------------------------------------------------------EE
Q 012891 280 HCMTCKGS-GVVDGVK--------------------------------------------------------------EV 296 (454)
Q Consensus 280 ~C~~C~g~-G~~~~~~--------------------------------------------------------------~~ 296 (454)
.=.++... |+..+.+ .+
T Consensus 213 ~~l~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDLiv~i~v~~h~~f~r~G~DL~~~~~Isl~eAl~G~~~~v~tldG~i 292 (373)
T PRK14301 213 RELKVRIPAGVDTGSRLRLRGEGEPGVHGGPPGDLYVVITVEDDKIFQRQGQDLVVTQEISFVQAALGDRIEVPTLDDPV 292 (373)
T ss_pred eEEEEEeCCCCcCCCEEEEeccccCCCCCCCCcCEEEEEEEEECCCceeecCcEEEEEEecHHHHhCCCeEEEecCCccE
Confidence 11111111 1111000 57
Q ss_pred EEEecCccCCCCEEEECCCcCCCCCCCCCccEEEEEEEecCCcccccCCCe
Q 012891 297 KVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADV 347 (454)
Q Consensus 297 ~V~Ip~G~~~G~~i~~~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL 347 (454)
+|.||+|+++|++++|+|+|.+...+...|||||+|+|..++.+..+..++
T Consensus 293 ~v~ip~g~~~g~~~ri~g~G~p~~~~~~~GDL~I~~~V~~P~~l~~~q~~~ 343 (373)
T PRK14301 293 TLDIPKGTQSGEVFRLRGKGLPYLGSSQKGDLLVEVSVVTPTKLTKRQEEL 343 (373)
T ss_pred EEEECCCcCCCcEEEEcCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHH
Confidence 899999999999999999999876555689999999999887665554433
No 67
>PRK14284 chaperone protein DnaJ; Provisional
Probab=99.26 E-value=1.3e-11 Score=127.35 Aligned_cols=138 Identities=28% Similarity=0.592 Sum_probs=92.0
Q ss_pred EEEEEEeeccccCcceeee--eceeecccCCCCCCccCC-----CccccCCCccccceEEeCCccccCCCCCCceEEeee
Q 012891 207 VELVLSFAEAAKGCTKHVS--FDAFVPCDSCHGRGFPAD-----AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKD 279 (454)
Q Consensus 207 ~~l~itlee~~~G~~k~v~--~~~~~~C~~C~G~G~~~~-----~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~ 279 (454)
..+.++-...+..|.-+-. -.....|+.|+|+|.... ....+|+.|+|.|.+ +...|+.|+|.|.+.+.
T Consensus 151 ~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~v~~~~G~~~~~~~C~~C~G~G~~----~~~~C~~C~G~g~v~~~ 226 (391)
T PRK14284 151 KELLVSGYKSCDACSGSGANSSQGIKVCDRCKGSGQVVQSRGFFSMASTCPECGGEGRV----ITDPCSVCRGQGRIKDK 226 (391)
T ss_pred EEEEEeeeccCCCCcccccCCCCCCeecCccCCeeEEEEEeceEEEEEECCCCCCCCcc----cCCcCCCCCCcceecce
Confidence 3455555555543332221 123467999999987431 134699999999987 45679999999876432
Q ss_pred ecccccCC-ceeece----------------------------------------------------------------E
Q 012891 280 HCMTCKGS-GVVDGV----------------------------------------------------------------K 294 (454)
Q Consensus 280 ~C~~C~g~-G~~~~~----------------------------------------------------------------~ 294 (454)
.-.+.... |+..++ .
T Consensus 227 ~~l~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~v~tld~g~ 306 (391)
T PRK14284 227 RSVHVHIPAGVDSGMRLKMEGYGDAGQNGAPAGDLYVFIDVEPHPVFERRGDDLILELPIGFVDAALGMKKEIPTLLKEG 306 (391)
T ss_pred EEEEEEECCCCCCCCEEEEeccccCCCCCCCCCCEEEEEEEecCCCceeecCCEEEEEEecHHHHhCCCeEEEeecCCCc
Confidence 21122111 111111 1
Q ss_pred EEEEEecCccCCCCEEEECCCcCCCCCCCCCccEEEEEEEecCCcccccCCCeE
Q 012891 295 EVKVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVY 348 (454)
Q Consensus 295 ~~~V~Ip~G~~~G~~i~~~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~ 348 (454)
.++|.||+|+++|++++|+|+|++...+..+|||||+|+|..++.+..+..+|+
T Consensus 307 ~i~v~Ip~g~~~g~~~~i~g~G~p~~~~~~~GDL~V~~~v~~P~~l~~~q~~ll 360 (391)
T PRK14284 307 TCRLTIPEGIQSGTILKVRGQGFPNVHGKGRGDLLVRISVETPQNLSEEQKELL 360 (391)
T ss_pred EEEEEECCccCCCeEEEECCCCCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHH
Confidence 567999999999999999999998655556899999999998877766554443
No 68
>PRK14287 chaperone protein DnaJ; Provisional
Probab=99.26 E-value=1.1e-11 Score=126.83 Aligned_cols=138 Identities=24% Similarity=0.532 Sum_probs=93.3
Q ss_pred EEEEEEeeccccCcceee--eeceeecccCCCCCCccCC---------CccccCCCccccceEEeCCccccCCCCCCceE
Q 012891 207 VELVLSFAEAAKGCTKHV--SFDAFVPCDSCHGRGFPAD---------AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGR 275 (454)
Q Consensus 207 ~~l~itlee~~~G~~k~v--~~~~~~~C~~C~G~G~~~~---------~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~ 275 (454)
..+.++....+.-|.-.- .-.....|+.|+|+|.... ....+|+.|.|+|.+ +...|..|+|.|.
T Consensus 131 ~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~----~~~~C~~C~G~g~ 206 (371)
T PRK14287 131 TEIEIPREETCGTCHGSGAKPGTKPETCSHCGGSGQLNVEQNTPFGRVVNRRVCHHCEGTGKI----IKQKCATCGGKGK 206 (371)
T ss_pred EEEEEeeeccCCCCCCcccCCCCCCcccCCCCCEEEEEEEEecCCceEEEEEeCCCCCCCCcc----ccccCCCCCCeeE
Confidence 445555555544333221 1223467999999997532 124699999999987 3567999999997
Q ss_pred EeeeecccccCC-ceeeceE------------------------------------------------------------
Q 012891 276 IIKDHCMTCKGS-GVVDGVK------------------------------------------------------------ 294 (454)
Q Consensus 276 ~~~~~C~~C~g~-G~~~~~~------------------------------------------------------------ 294 (454)
+.+..-.++... |+..+.+
T Consensus 207 v~~~~~l~V~Ip~G~~~G~~i~~~G~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~~l 286 (371)
T PRK14287 207 VRKRKKINVKVPAGIDHGQQLRVSGQGEAGVNGGPPGDLYVVFNVKPHEFFERDGDDIYCEMPLTFPQVALGDEIEVPTL 286 (371)
T ss_pred EeeeEEEEEEECCcCCCCCEEEEccCCcCCCCCCCCccEEEEEEEecCCCEEEecCCeEEEEeccHHHHhCCCEEEEEcC
Confidence 643222222211 1111110
Q ss_pred --EEEEEecCccCCCCEEEECCCcCCCCCCCCCccEEEEEEEecCCcccccCCCeE
Q 012891 295 --EVKVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVY 348 (454)
Q Consensus 295 --~~~V~Ip~G~~~G~~i~~~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~ 348 (454)
.++|.||+|+++|++++|+|+|.+...+...|||||+|+|..++.+.++...|+
T Consensus 287 dg~i~v~ip~g~~~g~~~ri~g~G~p~~~~~~~GDL~V~~~v~~P~~l~~~q~~ll 342 (371)
T PRK14287 287 NGKVKLKIPAGTQTGTSFRLRGKGVPNVHGRGQGDQHVQVRVVTPKNLTEKEKELM 342 (371)
T ss_pred CCCEEEEECCCccCCcEEEEcCCCccCCCCCCCCCEEEEEEEEcCCCCCHHHHHHH
Confidence 578999999999999999999998655556799999999998887766654443
No 69
>TIGR02349 DnaJ_bact chaperone protein DnaJ. This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.
Probab=99.25 E-value=1.3e-11 Score=125.93 Aligned_cols=137 Identities=30% Similarity=0.561 Sum_probs=91.8
Q ss_pred EEEEEEeeccccCcceeeee--ceeecccCCCCCCccCC---------CccccCCCccccceEEeCCccccCCCCCCceE
Q 012891 207 VELVLSFAEAAKGCTKHVSF--DAFVPCDSCHGRGFPAD---------AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGR 275 (454)
Q Consensus 207 ~~l~itlee~~~G~~k~v~~--~~~~~C~~C~G~G~~~~---------~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~ 275 (454)
..+.++....+..|.-.-.- .....|+.|+|+|.... ....+|+.|+|.|.+. ...|+.|.|.|.
T Consensus 136 ~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~----~~~C~~C~G~g~ 211 (354)
T TIGR02349 136 KEIEIPRKESCETCHGTGAKPGTDPKTCPTCGGTGQVRRQQGTPFGFFQQQQTCPTCGGEGKII----KEPCSTCKGKGR 211 (354)
T ss_pred EEEEeecCCcCCCCCCCCCCCCCCCccCCCCCCeeEEEEEEeccCCceEEEEecCCCCCcceec----CCCCCCCCCCcE
Confidence 34555555555444332221 23568999999986431 2246999999999973 567999999997
Q ss_pred Eeeeeccc--------------ccCCce------------ee--c-----------------------------------
Q 012891 276 IIKDHCMT--------------CKGSGV------------VD--G----------------------------------- 292 (454)
Q Consensus 276 ~~~~~C~~--------------C~g~G~------------~~--~----------------------------------- 292 (454)
+.+..-.+ ..|.|. +. .
T Consensus 212 v~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDl~v~i~v~~h~~f~r~g~DL~~~~~isl~eAl~G~~~~i~~l 291 (354)
T TIGR02349 212 VKERKTITVKIPAGVDTGQRLRVSGKGNAGENGGPNGDLYVVIRVKPHKIFERDGNDLYIEVPISFTQAILGGEIEVPTL 291 (354)
T ss_pred ecccceEEEEECCCCCCCCEEEEecCccCCCCCCCCCCEEEEEEEecCcceEEecCCEEEEEEeCHHHHhCCCeEEEecC
Confidence 64311111 111111 00 0
Q ss_pred eEEEEEEecCccCCCCEEEECCCcCCCCCCCCCccEEEEEEEecCCcccccCCCe
Q 012891 293 VKEVKVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADV 347 (454)
Q Consensus 293 ~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL 347 (454)
..+++|.||+|+++|++++|+|+|++...+..+|||||+|+|..++.+.++..++
T Consensus 292 dG~i~v~ip~g~~~g~~~~i~g~G~p~~~~~~~GDL~i~~~v~~P~~l~~~~~~~ 346 (354)
T TIGR02349 292 DGDVKLKIPAGTQSGTVFRLKGKGVPRLRGNGRGDLLVTVKVETPKNLSKEQKEL 346 (354)
T ss_pred CceEEEEECCcccCCcEEEECCCCcCCCCCCCCCCEEEEEEEECCCCCCHHHHHH
Confidence 0057899999999999999999999865555789999999999888777665444
No 70
>PRK14300 chaperone protein DnaJ; Provisional
Probab=99.25 E-value=3.4e-11 Score=123.35 Aligned_cols=132 Identities=27% Similarity=0.551 Sum_probs=88.5
Q ss_pred EEEEEEeeccccCcceeee--eceeecccCCCCCCccCC-----CccccCCCccccceEEeCCccccCCCCCCceEEeee
Q 012891 207 VELVLSFAEAAKGCTKHVS--FDAFVPCDSCHGRGFPAD-----AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKD 279 (454)
Q Consensus 207 ~~l~itlee~~~G~~k~v~--~~~~~~C~~C~G~G~~~~-----~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~ 279 (454)
.++.++-...+..|...-. -.....|+.|+|+|.... ....+|+.|+|.|.+. ...|..|+|.|.+.+.
T Consensus 138 k~i~~~r~~~C~~C~G~g~~~~~~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~~----~~~C~~C~G~g~v~~~ 213 (372)
T PRK14300 138 KNISFSSEVKCDTCHGSGSEKGETVTTCDACSGVGATRMQQGFFTIEQACHKCQGNGQII----KNPCKKCHGMGRYHKQ 213 (372)
T ss_pred EEEEeeeccccCCCCCcccCCCCCCccCCCccCeEEEEEeeceEEEEEeCCCCCccceEe----CCCCCCCCCceEEEee
Confidence 3444444544443333221 123467999999997531 1356899999999984 5679999999987432
Q ss_pred ecccccCC-ceeece---------------------------------------------------------------EE
Q 012891 280 HCMTCKGS-GVVDGV---------------------------------------------------------------KE 295 (454)
Q Consensus 280 ~C~~C~g~-G~~~~~---------------------------------------------------------------~~ 295 (454)
.=.++... |+..+. +.
T Consensus 214 ~~~~V~Ip~G~~~G~~i~l~g~G~~~~~~~~~GDL~v~i~v~~h~~f~R~G~Dl~~~~~Isl~~Al~G~~~~i~~ldg~~ 293 (372)
T PRK14300 214 RNLSVNIPAGVENGTRIRHTGEGEAGIRGGNSGDLYVDIAIKPHDIYKVDGANLHCKLPISFVNAALGGEIEVPVIEGGK 293 (372)
T ss_pred EEEEEEECCCCCCCcEEEEeccccCCCCCCCCCCEEEEEEECCCCCeEEecCCEEEEEecCHHHHhCCCEEEEecCCCCE
Confidence 11111111 111000 06
Q ss_pred EEEEecCccCCCCEEEECCCcCCCCCCCCCccEEEEEEEecCCcccc
Q 012891 296 VKVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSR 342 (454)
Q Consensus 296 ~~V~Ip~G~~~G~~i~~~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R 342 (454)
++|.||+|+++|++++|+|+|++...+..+|||||+|+|..+..+.-
T Consensus 294 i~v~Ip~g~~~g~~iri~g~G~p~~~~~~~GDL~V~~~v~~P~~ls~ 340 (372)
T PRK14300 294 VNLTIPAGTQNGDQLRLRSKGMSKMRSTIRGDMLTHIHVEVPKNLSK 340 (372)
T ss_pred EEEEECCccCCCcEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCCH
Confidence 89999999999999999999998655567899999999998765543
No 71
>PRK14288 chaperone protein DnaJ; Provisional
Probab=99.25 E-value=4.6e-11 Score=122.25 Aligned_cols=134 Identities=21% Similarity=0.468 Sum_probs=89.7
Q ss_pred EEEEEEeeccccCcceeee-eceeecccCCCCCCccCC-----CccccCCCccccceEEeCCccccCCCCCCceEEeeee
Q 012891 207 VELVLSFAEAAKGCTKHVS-FDAFVPCDSCHGRGFPAD-----AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDH 280 (454)
Q Consensus 207 ~~l~itlee~~~G~~k~v~-~~~~~~C~~C~G~G~~~~-----~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~ 280 (454)
.++.++....+..|.-+-. -.....|+.|+|+|.... ....+|+.|.|+|.+ +...|..|+|.|.+.+..
T Consensus 133 ~~i~~~r~~~C~~C~G~G~~~~~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~----~~~~C~~C~G~g~v~~~~ 208 (369)
T PRK14288 133 KTIKVQYQSVCESCDGTGAKDKALETCKQCNGQGQVFMRQGFMSFAQTCGACQGKGKI----IKTPCQACKGKTYILKDE 208 (369)
T ss_pred EEEEEEeeccCCCCCCcccCCCCCcCCCCCCCCcEEEEEeceEEEEEecCCCCCCceE----ccccCccCCCcceEEEEE
Confidence 3444554544433322111 124578999999996431 224589999999997 356799999999875432
Q ss_pred cccccCC-ceeeceE--------------------------------------------------------------EEE
Q 012891 281 CMTCKGS-GVVDGVK--------------------------------------------------------------EVK 297 (454)
Q Consensus 281 C~~C~g~-G~~~~~~--------------------------------------------------------------~~~ 297 (454)
-.+.... |+..+.+ .++
T Consensus 209 ~l~V~IP~G~~~G~~i~l~g~G~~~~~~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~Isl~eAllG~~i~v~tLdG~~l~ 288 (369)
T PRK14288 209 EIDAIIPEGIDDQNRMVLKNKGNEYEKGKRGDLYLEARVKEDEHFKREGCDLFIEAPVFFTTIALGHTIKVPSLKGDELE 288 (369)
T ss_pred EEEEecCCCCCCCCEEEEccCccCCCCCCCCCEEEEEEEEECCCcEEeCCEEEEEEecCHHHHhcCCEEEeecCCCCEEE
Confidence 2222211 1111111 589
Q ss_pred EEecCccCCCCEEEECCCcCCCCCCCCCccEEEEEEEecCCcccccC
Q 012891 298 VTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDG 344 (454)
Q Consensus 298 V~Ip~G~~~G~~i~~~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~G 344 (454)
|.||+|+++|++++|+|+|++...+...|||||+|+|..+..+..+.
T Consensus 289 i~i~~~~~~g~~~~i~g~G~p~~~~~~~GDL~v~~~v~~P~~ls~~q 335 (369)
T PRK14288 289 LKIPRNARDRQTFAFRNEGVKHPESSYRGSLIVELQVIYPKSLNKEQ 335 (369)
T ss_pred EEeCCCCCCCcEEEEcCCCCCCCCCCCCCCEEEEEEEECCCCCCHHH
Confidence 99999999999999999999865444469999999999887665443
No 72
>PRK09430 djlA Dna-J like membrane chaperone protein; Provisional
Probab=99.24 E-value=8.6e-12 Score=121.87 Aligned_cols=60 Identities=38% Similarity=0.584 Sum_probs=52.7
Q ss_pred CCCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCC--C-----hhHHHHHHHHHHHHHhhhhh
Q 012891 79 SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKN--N-----PSAKRKFQEIRDAYETLRDS 138 (454)
Q Consensus 79 ~~~~~~Y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~--~-----~~a~~~f~~i~~Ay~vL~d~ 138 (454)
+...++|++|||++++|.+|||+|||+|+++||||++.+ . +.++++|++|++||++|+..
T Consensus 197 ~~~~~ay~vLgv~~~as~~eIk~aYr~L~~~~HPDk~~~~g~~~~~~~~a~ek~~~I~~AYe~L~~~ 263 (267)
T PRK09430 197 PTLEDAYKVLGVSESDDDQEIKRAYRKLMSEHHPDKLVAKGLPPEMMEMAKEKAQEIQAAYELIKKQ 263 (267)
T ss_pred CcHHhHHHHcCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHh
Confidence 345799999999999999999999999999999999743 1 24789999999999999863
No 73
>PRK14278 chaperone protein DnaJ; Provisional
Probab=99.23 E-value=4.9e-11 Score=122.43 Aligned_cols=128 Identities=30% Similarity=0.540 Sum_probs=86.3
Q ss_pred EEEEEEeeccccCcceeee--eceeecccCCCCCCccCC---------CccccCCCccccceEEeCCccccCCCCCCceE
Q 012891 207 VELVLSFAEAAKGCTKHVS--FDAFVPCDSCHGRGFPAD---------AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGR 275 (454)
Q Consensus 207 ~~l~itlee~~~G~~k~v~--~~~~~~C~~C~G~G~~~~---------~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~ 275 (454)
..+.++....+..|.-.-. -.....|+.|+|+|.... ....+|+.|+|+|.+. ...|+.|+|.|.
T Consensus 132 ~~i~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~----~~~C~~C~G~g~ 207 (378)
T PRK14278 132 KQVTVDTAVLCDRCHGKGTAGDSKPVTCDTCGGRGEVQTVQRSFLGQVMTSRPCPTCRGVGEVI----PDPCHECAGDGR 207 (378)
T ss_pred EEEEEEeeccCCCCcCccCCCCCCceecCCccCceEEEEEEeccceeEEEEEECCCCCccceee----CCCCCCCCCcee
Confidence 4555555655544433221 123467999999997432 1256899999999983 567999999998
Q ss_pred EeeeecccccCC-ceeece-------------------------------------------------------------
Q 012891 276 IIKDHCMTCKGS-GVVDGV------------------------------------------------------------- 293 (454)
Q Consensus 276 ~~~~~C~~C~g~-G~~~~~------------------------------------------------------------- 293 (454)
+.+..-.+.... |+..+.
T Consensus 208 v~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~v~i~~~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tl 287 (378)
T PRK14278 208 VRARREITVKIPAGVGDGMRIRLAAQGEVGPGGGPAGDLYVEVHEQPHDVFVRDGDDLHCTVSVPMVDAALGTTVTVEAI 287 (378)
T ss_pred EecceEEEEEECCCCCCCcEEEEccCcCCCCCCCCCCCEEEEEEECcCCCEEEcCCCEEEEEecCHHHHhcCCeEEEecC
Confidence 643211111111 111000
Q ss_pred --EEEEEEecCccCCCCEEEECCCcCCCCCCCCCccEEEEEEEecCC
Q 012891 294 --KEVKVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDP 338 (454)
Q Consensus 294 --~~~~V~Ip~G~~~G~~i~~~g~G~~~~~g~~~GDL~v~i~v~~h~ 338 (454)
..++|.||+|+++|++++|+|+|++...+...|||||+|+|.-..
T Consensus 288 d~~~i~v~ip~g~~~g~~lrl~g~G~p~~~~~~~GDL~V~~~V~~P~ 334 (378)
T PRK14278 288 LDGPSEITIPPGTQPGSVITLRGRGMPHLRSGGRGDLHAHVEVVVPT 334 (378)
T ss_pred CCCeEEEEeCCCcCCCcEEEECCCCCCCCCCCCCCCEEEEEEEEcCC
Confidence 067899999999999999999999865555689999999998443
No 74
>PRK14281 chaperone protein DnaJ; Provisional
Probab=99.21 E-value=7.2e-11 Score=121.97 Aligned_cols=128 Identities=30% Similarity=0.529 Sum_probs=86.0
Q ss_pred EEEEEEeeccccCcceee-eeceeecccCCCCCCccCCC---------ccccCCCccccceEEeCCccccCCCCCCceEE
Q 012891 207 VELVLSFAEAAKGCTKHV-SFDAFVPCDSCHGRGFPADA---------KTKICSTCRGIGRVTIPPFTSTCSTCKGLGRI 276 (454)
Q Consensus 207 ~~l~itlee~~~G~~k~v-~~~~~~~C~~C~G~G~~~~~---------~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~ 276 (454)
.++.++....+.-|.-.- .-.....|+.|+|+|..... ...+|+.|+|.|.+. ...|+.|+|.|.+
T Consensus 156 ~~i~~~r~~~C~~C~G~G~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~----~~~C~~C~G~g~v 231 (397)
T PRK14281 156 KTLKIKKQVPCKECNGTGSKTGATETCPTCHGSGEVRQASKTMFGQFVNITACPTCGGEGRVV----KDRCPACYGEGIK 231 (397)
T ss_pred EEEEEEeeecCCCCCCcccCCCCCccCCCCCCCcEEEEEEecccceEEEEEecCCCcceeeee----CCCCCCCCCCccE
Confidence 445555555543332211 11235689999999975321 256899999999883 5679999999987
Q ss_pred eeeecccccCC-ceeeceE-------------------------------------------------------------
Q 012891 277 IKDHCMTCKGS-GVVDGVK------------------------------------------------------------- 294 (454)
Q Consensus 277 ~~~~C~~C~g~-G~~~~~~------------------------------------------------------------- 294 (454)
.+..-.+.... |+..+.+
T Consensus 232 ~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~i~i~~~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tld 311 (397)
T PRK14281 232 QGEVTVKVTVPAGVQDGNYLTLRGQGNAGPRGGAPGDLIVVIEEKPHELFVRNGDDVIYNLAVSYPDLVLGTKVEVPTLD 311 (397)
T ss_pred ecceEEEEecCCCCCCCCEEEEecccccCCCCCCCCcEEEEEEEcCCCCeEEecCCEEEEEEecHHHHhcCCeEEeecCC
Confidence 54222222211 1111111
Q ss_pred -EEEEEecCccCCCCEEEECCCcCCCCCCCCCccEEEEEEEecCC
Q 012891 295 -EVKVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDP 338 (454)
Q Consensus 295 -~~~V~Ip~G~~~G~~i~~~g~G~~~~~g~~~GDL~v~i~v~~h~ 338 (454)
.++|.||+|+++|++++|+|+|.+...+...|||||+|+|.-..
T Consensus 312 g~i~v~ip~g~~~G~~~ri~g~G~P~~~~~~~GDL~V~~~V~~P~ 356 (397)
T PRK14281 312 GAVKLTIPAGTQPETMLRIPGKGIGHLRGSGRGDQYVRVNVFVPK 356 (397)
T ss_pred ccEEEEeCCccCCCcEEEEcCCCCCCCCCCCCCCEEEEEEEEcCC
Confidence 57899999999999999999999865555679999999999443
No 75
>PRK14276 chaperone protein DnaJ; Provisional
Probab=99.21 E-value=6.5e-11 Score=121.64 Aligned_cols=129 Identities=26% Similarity=0.540 Sum_probs=86.5
Q ss_pred EEEEEEeeccccCcceeee--eceeecccCCCCCCccCC---------CccccCCCccccceEEeCCccccCCCCCCceE
Q 012891 207 VELVLSFAEAAKGCTKHVS--FDAFVPCDSCHGRGFPAD---------AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGR 275 (454)
Q Consensus 207 ~~l~itlee~~~G~~k~v~--~~~~~~C~~C~G~G~~~~---------~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~ 275 (454)
.++.++....+.-|.-.-. -.....|+.|+|+|.... ....+|+.|+|+|.+ +...|..|+|.|.
T Consensus 139 ~~i~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~----~~~~C~~C~G~g~ 214 (380)
T PRK14276 139 KEVSYNREATCHTCNGSGAKPGTSPVTCGKCHGSGVITVDTQTPLGMMRRQVTCDVCHGTGKE----IKEPCQTCHGTGH 214 (380)
T ss_pred EEEEeeccccCCCCcCcccCCCCCCccCCCCCCeeEEEEEEecCCceEEEEEECCCCCCCCcc----ccCCCCCCCCceE
Confidence 3445554544433322211 123467999999997532 125689999999987 3578999999998
Q ss_pred EeeeecccccCC-ceeeceE------------------------------------------------------------
Q 012891 276 IIKDHCMTCKGS-GVVDGVK------------------------------------------------------------ 294 (454)
Q Consensus 276 ~~~~~C~~C~g~-G~~~~~~------------------------------------------------------------ 294 (454)
+.+..-.++... |+..+.+
T Consensus 215 ~~~~~~l~V~Ip~G~~~G~~i~l~G~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~v~tl 294 (380)
T PRK14276 215 EKQAHTVSVKIPAGVETGQQIRLQGQGEAGFNGGPYGDLYVVFRVEPSKKFERDGSTIYYTLPISFVQAALGDTVEVPTV 294 (380)
T ss_pred EEEEEEEEEEeCCCccCCcEEEEeccccCCCCCCCCcCEEEEEEEEECcceeeecceEEEEEecCHHHHhCCCeEEEEcC
Confidence 654322222211 1111111
Q ss_pred --EEEEEecCccCCCCEEEECCCcCCCCCCCCCccEEEEEEEecCCc
Q 012891 295 --EVKVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPI 339 (454)
Q Consensus 295 --~~~V~Ip~G~~~G~~i~~~g~G~~~~~g~~~GDL~v~i~v~~h~~ 339 (454)
.++|.||+|+++|++++|+|+|++...+..+|||||+|+|.-...
T Consensus 295 dg~i~v~ip~g~~~g~~~~i~g~G~p~~~~~~~GDL~V~~~v~~P~~ 341 (380)
T PRK14276 295 HGDVELKIPAGTQTGKKFRLRGKGAPKLRGGGNGDQHVTVNIVTPTK 341 (380)
T ss_pred CCcEEEEECCCCCCCCEEEECCCCcCCCCCCCCCCEEEEEEEECCCC
Confidence 578999999999999999999998755556799999999995543
No 76
>PRK14279 chaperone protein DnaJ; Provisional
Probab=99.21 E-value=7.4e-11 Score=121.58 Aligned_cols=128 Identities=28% Similarity=0.548 Sum_probs=86.7
Q ss_pred EEEEEEeeccccCcceeee--eceeecccCCCCCCccCC-----CccccCCCccccceEEeCCccccCCCCCCceEEeee
Q 012891 207 VELVLSFAEAAKGCTKHVS--FDAFVPCDSCHGRGFPAD-----AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKD 279 (454)
Q Consensus 207 ~~l~itlee~~~G~~k~v~--~~~~~~C~~C~G~G~~~~-----~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~ 279 (454)
..+.++....+.-|.-+-. -.....|+.|+|+|.... ....+|+.|+|+|.+. ...|..|+|.|.+.+.
T Consensus 166 ~~v~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~i----~~~C~~C~G~g~v~~~ 241 (392)
T PRK14279 166 MPLRLTSPAPCTTCHGSGARPGTSPKVCPTCNGSGVISRNQGAFGFSEPCTDCRGTGSII----EDPCEECKGTGVTTRT 241 (392)
T ss_pred EEEeeeccccCCCCccccccCCCCCCCCCCCcceEEEEEEecceEEEEecCCCCceeEEe----CCcCCCCCCCeEEEEe
Confidence 3455555555543333222 123478999999997532 1357999999999984 5679999999987542
Q ss_pred ecccccCC-ceeeceE--------------------------------------------------------------EE
Q 012891 280 HCMTCKGS-GVVDGVK--------------------------------------------------------------EV 296 (454)
Q Consensus 280 ~C~~C~g~-G~~~~~~--------------------------------------------------------------~~ 296 (454)
.-.+.... |+..+.+ ++
T Consensus 242 ~~~~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~i~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~v~~ldg~i 321 (392)
T PRK14279 242 RTINVRIPPGVEDGQRIRLAGQGEAGLRGAPSGDLYVTVHVRPDKVFGRDGDDLTVTVPVSFTELALGSTLSVPTLDGPV 321 (392)
T ss_pred eeeEEEeCCCCCCCcEEEEeCCccCCCCCCCCCCEEEEEEEecCCcceeecCcEEEEEEccHHHHcCCceEEEEcCCceE
Confidence 21111111 1111000 57
Q ss_pred EEEecCccCCCCEEEECCCcCCCCCCCCCccEEEEEEEecCCc
Q 012891 297 KVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPI 339 (454)
Q Consensus 297 ~V~Ip~G~~~G~~i~~~g~G~~~~~g~~~GDL~v~i~v~~h~~ 339 (454)
+|.||+|+++|++++|+|+|++.. +...|||||+|+|.-+..
T Consensus 322 ~v~Ip~g~~~g~~iri~g~G~p~~-~~~~GDL~I~~~v~~P~~ 363 (392)
T PRK14279 322 GVKVPAGTADGRILRVRGRGVPKR-SGGAGDLLVTVKVAVPPN 363 (392)
T ss_pred EEEECCCCCCCCEEEECCCCCCCC-CCCCCCEEEEEEEECCCC
Confidence 899999999999999999999863 456899999999996543
No 77
>PRK14286 chaperone protein DnaJ; Provisional
Probab=99.20 E-value=3.5e-11 Score=123.24 Aligned_cols=133 Identities=26% Similarity=0.447 Sum_probs=87.7
Q ss_pred EEEEEEeeccccCcceeee--eceeecccCCCCCCccCC-----CccccCCCccccceEEeCCccccCCCCCCceEEeee
Q 012891 207 VELVLSFAEAAKGCTKHVS--FDAFVPCDSCHGRGFPAD-----AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKD 279 (454)
Q Consensus 207 ~~l~itlee~~~G~~k~v~--~~~~~~C~~C~G~G~~~~-----~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~ 279 (454)
..+.++....+.-|.-.-. -.....|+.|+|+|.... ....+|+.|+|+|.+. ...|+.|+|.|.+.+.
T Consensus 143 k~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~v~~~~G~~~~~~~C~~C~G~G~~~----~~~C~~C~G~g~~~~~ 218 (372)
T PRK14286 143 YKIEIPRLESCVDCNGSGASKGSSPTTCPDCGGSGQIRRTQGFFSVATTCPTCRGKGTVI----SNPCKTCGGQGLQEKR 218 (372)
T ss_pred EEEEeeccccCCCCcCCCcCCCCCCccCCCCcCeEEEEEEeceEEEEEeCCCCCceeeEe----cccCCCCCCCcEEecc
Confidence 3455555555543333221 123467999999996422 2356899999999884 5679999999987431
Q ss_pred ecc--------------cccCCce------------eece--------------------------------------EE
Q 012891 280 HCM--------------TCKGSGV------------VDGV--------------------------------------KE 295 (454)
Q Consensus 280 ~C~--------------~C~g~G~------------~~~~--------------------------------------~~ 295 (454)
.=. ...|.|. +.-. +.
T Consensus 219 ~~l~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~i~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tldG~~ 298 (372)
T PRK14286 219 RTINIKIPPGVETGSRLKVSGEGEAGPNGGPHGDLYVVTHIKKHELFERQGNDLILVRKISLAQAILGAEIEVPTIDGKK 298 (372)
T ss_pred eEEEEEECCCCCCCCEEEECCccccCCCCCCCceEEEEEEEccCCCEEEecCCEEEEEEECHHHHhCCCEEEEeCCCCCE
Confidence 111 1111111 0000 05
Q ss_pred EEEEecCccCCCCEEEECCCcCCCCCCCCCccEEEEEEEecCCccccc
Q 012891 296 VKVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRD 343 (454)
Q Consensus 296 ~~V~Ip~G~~~G~~i~~~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~ 343 (454)
++|.||+|+++|++++|+|+|.+...+...|||||+|+|.-+..+..+
T Consensus 299 i~v~ip~g~~~g~~~ri~G~G~P~~~~~~~GDL~V~~~V~~P~~Ls~~ 346 (372)
T PRK14286 299 AKMKIPEGTESGQVFRLKGHGMPYLGAYGKGDQHVIVKIEIPKKITRR 346 (372)
T ss_pred EEEEeCCccCCCcEEEECCCCCCCCCCCCCCcEEEEEEEECCCCCCHH
Confidence 889999999999999999999986555567999999999966544433
No 78
>PRK14280 chaperone protein DnaJ; Provisional
Probab=99.20 E-value=9.2e-11 Score=120.37 Aligned_cols=129 Identities=26% Similarity=0.538 Sum_probs=86.2
Q ss_pred EEEEEEeeccccCcceeee--eceeecccCCCCCCccCC---------CccccCCCccccceEEeCCccccCCCCCCceE
Q 012891 207 VELVLSFAEAAKGCTKHVS--FDAFVPCDSCHGRGFPAD---------AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGR 275 (454)
Q Consensus 207 ~~l~itlee~~~G~~k~v~--~~~~~~C~~C~G~G~~~~---------~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~ 275 (454)
.++.++....+..|.-.-. -.....|+.|+|+|.... ....+|+.|+|.|.+ +...|+.|+|.|.
T Consensus 136 ~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~----~~~~C~~C~G~g~ 211 (376)
T PRK14280 136 KEIEIPKEETCDTCHGSGAKPGTSKETCSHCGGSGQVSVEQNTPFGRVVNRQTCPHCNGTGQE----IKEKCPTCHGKGK 211 (376)
T ss_pred eEEEEeeeccCCCCCCcccCCCCCCccCCCCCCEEEEEEEeecCCceEEEEEEcCCCCCCCce----ecCCCCCCCCceE
Confidence 3455555555544433222 123467999999996421 135699999999987 3567999999998
Q ss_pred EeeeecccccCC-ceeeceE------------------------------------------------------------
Q 012891 276 IIKDHCMTCKGS-GVVDGVK------------------------------------------------------------ 294 (454)
Q Consensus 276 ~~~~~C~~C~g~-G~~~~~~------------------------------------------------------------ 294 (454)
+.+..-..+... |+..+.+
T Consensus 212 v~~~~~i~V~Ip~G~~~G~~i~l~G~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tl 291 (376)
T PRK14280 212 VRKRKKINVKIPAGVDNGQQIRVSGEGEPGVNGGPAGDLYVVFRVRPHEFFERDGDDIYCEMPLTFAQAALGDEIEVPTL 291 (376)
T ss_pred EEEEEEEEEEeCCCCcCCcEEEEcccccCCCCCCCCcCEEEEEEEecCCCeEEecCCEEEEEecCHHHHhCCCEEEEecC
Confidence 643211111110 1110000
Q ss_pred --EEEEEecCccCCCCEEEECCCcCCCCCCCCCccEEEEEEEecCCc
Q 012891 295 --EVKVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPI 339 (454)
Q Consensus 295 --~~~V~Ip~G~~~G~~i~~~g~G~~~~~g~~~GDL~v~i~v~~h~~ 339 (454)
.++|.||+|+++|++++|+|+|.+...+...|||||+|+|.....
T Consensus 292 dg~i~v~ip~g~~~g~~~~i~g~G~p~~~~~~~GDL~v~~~v~~P~~ 338 (376)
T PRK14280 292 HGKVKLKIPAGTQTGTQFRLKGKGVPNVRGYGQGDQYVVVRVVTPTK 338 (376)
T ss_pred CceEEEEECCCCCCCcEEEEcCCCCCCCCCCCCCCEEEEEEEECCCC
Confidence 578999999999999999999998654556899999999995543
No 79
>PRK14293 chaperone protein DnaJ; Provisional
Probab=99.19 E-value=4.6e-11 Score=122.56 Aligned_cols=118 Identities=25% Similarity=0.468 Sum_probs=85.6
Q ss_pred eecccCCCCCCccCC---------CccccCCCccccceEEeCCccccCCCCCCceEEeeeeccccc--------------
Q 012891 229 FVPCDSCHGRGFPAD---------AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTCK-------------- 285 (454)
Q Consensus 229 ~~~C~~C~G~G~~~~---------~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~C~~C~-------------- 285 (454)
...|+.|+|+|.... .....|+.|+|.|.+ +...|..|.|.|.+.+..=.++.
T Consensus 160 ~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~----~~~~C~~C~G~g~v~~~~~~~V~IppG~~~G~~i~l~ 235 (374)
T PRK14293 160 PTTCSTCGGAGQVRRATRTPFGSFTQVSECPTCNGTGQV----IEDPCDACGGQGVKQVTKKLKINIPAGVDTGTRLRVS 235 (374)
T ss_pred CeeCCCCCCcceEEEEEecCcceEEEEeeCCCCCcceeE----eccCCCCCCCCcccccceEEEEEeCCCCCCCCEEEEc
Confidence 467999999997431 124689999999997 35679999999976432111111
Q ss_pred CCceee------ceE-------------------------------------------EEEEEecCccCCCCEEEECCCc
Q 012891 286 GSGVVD------GVK-------------------------------------------EVKVTIPAGVDSGDTIRVPEAG 316 (454)
Q Consensus 286 g~G~~~------~~~-------------------------------------------~~~V~Ip~G~~~G~~i~~~g~G 316 (454)
|.|... +.- .++|.||+|+++|++++|+|+|
T Consensus 236 g~G~~~~~~~~~GDL~v~v~v~~~~~f~r~g~DL~~~~~Isl~eAl~G~~~~i~~ldG~~~i~ip~~~~~g~~~ri~g~G 315 (374)
T PRK14293 236 GEGDAGLRGGPPGDLYVYLFVKNDPEFRRDGINILSEIKISYLQAILGDTLEVDTVDGPVELTIPAGTQPNTVLTLENKG 315 (374)
T ss_pred cCccCCCCCCCCcCEEEEEEEeCCCccChhhhceEEEeccCHHHHhCCCEEEecCCCCCEEEEeCCCCCCCCEEEECCCC
Confidence 111100 000 5789999999999999999999
Q ss_pred CCCCCC-CCCccEEEEEEEecCCcccccCCCeEEE
Q 012891 317 NAGGRG-RQHGNLFIKLKVADDPIFSRDGADVYVD 350 (454)
Q Consensus 317 ~~~~~g-~~~GDL~v~i~v~~h~~f~R~G~DL~~~ 350 (454)
.+...+ ...|||||+|+|..++.+.+++.+|+-.
T Consensus 316 ~p~~~~~~~~GDL~v~~~v~~P~~l~~~~~~l~~~ 350 (374)
T PRK14293 316 VPRLGNPVARGDHLITVKVKIPTRISDEERELLEK 350 (374)
T ss_pred CCCCCCCCCcCCEEEEEEEECCCCCCHHHHHHHHH
Confidence 986433 3579999999999988888888777654
No 80
>PRK14289 chaperone protein DnaJ; Provisional
Probab=99.18 E-value=9.5e-11 Score=120.79 Aligned_cols=127 Identities=24% Similarity=0.496 Sum_probs=87.9
Q ss_pred EEEEEEeeccccCcceeee--eceeecccCCCCCCccCCC---------ccccCCCccccceEEeCCccccCCCCCCceE
Q 012891 207 VELVLSFAEAAKGCTKHVS--FDAFVPCDSCHGRGFPADA---------KTKICSTCRGIGRVTIPPFTSTCSTCKGLGR 275 (454)
Q Consensus 207 ~~l~itlee~~~G~~k~v~--~~~~~~C~~C~G~G~~~~~---------~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~ 275 (454)
..+.++....+..|...-. -.....|+.|+|+|..... ....|+.|+|+|.+ ....|..|+|+|.
T Consensus 147 ~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~----~~~~C~~C~G~g~ 222 (386)
T PRK14289 147 KKFKVKKYVPCSHCHGTGAEGNNGSETCPTCKGSGSVTRVQNTILGTMQTQSTCPTCNGEGKI----IKKKCKKCGGEGI 222 (386)
T ss_pred EEEEEEeecccCCCCCCCCCCCCCCCcCCCCcCeEEEEEEEecccceEEEEEecCCCCccccc----cCcCCCCCCCCcE
Confidence 4555666666655544332 2345789999999975421 25689999999987 3567999999998
Q ss_pred Eeeeeccccc--------------CCceee------ceE-----------------------------------------
Q 012891 276 IIKDHCMTCK--------------GSGVVD------GVK----------------------------------------- 294 (454)
Q Consensus 276 ~~~~~C~~C~--------------g~G~~~------~~~----------------------------------------- 294 (454)
+.+..-.+.. |.|... +.-
T Consensus 223 v~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~~~~~~~GDL~v~v~v~~~~~f~r~g~DL~~~~~Isl~eAl~G~~~~i~~l 302 (386)
T PRK14289 223 VYGEEVITVKIPAGVAEGMQLSMNGKGNAGKHGGVNGDLLVVIEEEPHPELIRDENDLIYNLLLSVPTAALGGAVEVPTI 302 (386)
T ss_pred EeeeEEEEEEeCCCCCCCCEEEEeccccCCCCCCCCccEEEEEEEecCCcccccccceeEEeccCHHHHhCCCeEEeecC
Confidence 6432111111 111100 000
Q ss_pred --EEEEEecCccCCCCEEEECCCcCCCCCCCCCccEEEEEEEecC
Q 012891 295 --EVKVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADD 337 (454)
Q Consensus 295 --~~~V~Ip~G~~~G~~i~~~g~G~~~~~g~~~GDL~v~i~v~~h 337 (454)
.++|.||+|+++|++++|+|+|.+...+...|||||+|+|+-.
T Consensus 303 dg~i~v~ip~g~~~g~~~ri~g~G~p~~~~~~~GDL~v~~~v~~P 347 (386)
T PRK14289 303 DGKAKVKIEAGTQPGKVLRLRNKGLPSVNGYGTGDLLVNVSVYIP 347 (386)
T ss_pred CceEEEEECCccCCCcEEEECCCCcCCCCCCCCCcEEEEEEEEeC
Confidence 6789999999999999999999986555678999999999943
No 81
>PRK14297 chaperone protein DnaJ; Provisional
Probab=99.17 E-value=1.2e-10 Score=119.85 Aligned_cols=128 Identities=27% Similarity=0.498 Sum_probs=87.3
Q ss_pred EEEEEEeeccccCcceeee--eceeecccCCCCCCccCC---------CccccCCCccccceEEeCCccccCCCCCCceE
Q 012891 207 VELVLSFAEAAKGCTKHVS--FDAFVPCDSCHGRGFPAD---------AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGR 275 (454)
Q Consensus 207 ~~l~itlee~~~G~~k~v~--~~~~~~C~~C~G~G~~~~---------~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~ 275 (454)
.++.++....+.-|.-.-. -.....|+.|+|+|.... ....+|+.|+|.|.+ +...|..|+|.|.
T Consensus 141 ~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~----~~~~C~~C~G~g~ 216 (380)
T PRK14297 141 KEISVTRNENCETCNGTGAKPGTSPKTCDKCGGTGQIRVQRNTPLGSFVSTTTCDKCGGSGKV----IEDPCNKCHGKGK 216 (380)
T ss_pred EEEEeeeeccCCCcccccccCCCcCccCCCccCeEEEEEEEEcCCceeEEEEeCCCCCCCceE----cCCCCCCCCCCeE
Confidence 3455555555543333221 112567999999996531 235699999999987 3578999999997
Q ss_pred EeeeecccccCC-ceeeceE------------------------------------------------------------
Q 012891 276 IIKDHCMTCKGS-GVVDGVK------------------------------------------------------------ 294 (454)
Q Consensus 276 ~~~~~C~~C~g~-G~~~~~~------------------------------------------------------------ 294 (454)
+.+..-...... |+..+.+
T Consensus 217 v~~~~~i~V~Ip~G~~~G~~I~l~g~G~~~~~~~~~GDL~v~v~v~~h~~f~R~G~DL~~~~~Isl~eAl~G~~~~i~~l 296 (380)
T PRK14297 217 VRKNRKIKVNVPAGVDTGNVIPLRGQGEHGKNGGPTGDLYINIRVAPHKTFKRKGFDIYIDKHISFAKAALGTEIKVPTV 296 (380)
T ss_pred EEeEeEEEEEeCCCCCCCcEEEEecCccCCCCCCCCccEEEEEEEcCCCCEEEeCCCEEEEEEeCHHHHhCCCcEEEEcC
Confidence 644322222221 2211111
Q ss_pred --EEEEEecCccCCCCEEEECCCcCCCCCCCCCccEEEEEEEecCC
Q 012891 295 --EVKVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDP 338 (454)
Q Consensus 295 --~~~V~Ip~G~~~G~~i~~~g~G~~~~~g~~~GDL~v~i~v~~h~ 338 (454)
.++|.||+|+++|++++|+|+|.+...+...|||||+|+|.-..
T Consensus 297 dg~~~v~ip~g~~~g~~~ri~g~G~p~~~~~~~GDL~v~~~v~~P~ 342 (380)
T PRK14297 297 DGEVKYEVPAGTQPGTVFRLKGKGVPRVNSTGRGNQYVTVIVDIPK 342 (380)
T ss_pred CCcEEEEECCCcCCCCEEEEcCCCcCCCCCCCCCcEEEEEEEEcCC
Confidence 57899999999999999999999865555689999999999443
No 82
>PRK14292 chaperone protein DnaJ; Provisional
Probab=99.17 E-value=7.4e-11 Score=120.99 Aligned_cols=135 Identities=24% Similarity=0.487 Sum_probs=90.0
Q ss_pred EEEEEeeccccCcce---eeeeceeecccCCCCCCccCCC---------ccccCCCccccceEEeCCccccCCCCCCceE
Q 012891 208 ELVLSFAEAAKGCTK---HVSFDAFVPCDSCHGRGFPADA---------KTKICSTCRGIGRVTIPPFTSTCSTCKGLGR 275 (454)
Q Consensus 208 ~l~itlee~~~G~~k---~v~~~~~~~C~~C~G~G~~~~~---------~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~ 275 (454)
++.++-...+..|.. .........|..|.|+|..... ...+|+.|+|.|.. +...|..|.|+|.
T Consensus 133 ~v~~~r~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~----~~~~C~~C~G~g~ 208 (371)
T PRK14292 133 EVEVDRLTECEHCHGSRTEPGGKPPKTCPTCRGAGAVRAQARTIFGVVETQQPCPTCRGEGQI----ITDPCTVCRGRGR 208 (371)
T ss_pred EEEEEeeecCCCCcccccCCCCCCCccCCCCCCccEEEEEEeccCceEEEeeecCCCccccee----cCCCCCCCCCceE
Confidence 444444444443332 2222335789999999975421 24689999999987 4678999999997
Q ss_pred Eeeeecc--------------cccCCce----------eec-eE------------------------------------
Q 012891 276 IIKDHCM--------------TCKGSGV----------VDG-VK------------------------------------ 294 (454)
Q Consensus 276 ~~~~~C~--------------~C~g~G~----------~~~-~~------------------------------------ 294 (454)
+....=. ...|.|. +.- .+
T Consensus 209 v~~~~~~~V~Ip~G~~~G~~i~~~G~G~~~~~~~GDL~v~i~v~~h~~f~r~g~dL~~~~~isl~eAl~G~~~~i~tldG 288 (371)
T PRK14292 209 TLKAETVKVKLPRGIDEGYRIRVAGMGNEGPGGNGDLYVHIEMEPHPELRREQEHLIYEARIGFAKAALGGQITVPTLDG 288 (371)
T ss_pred EeecceEEEEECCCCCCCcEEEEecCcCCCCCCCCCEEEEEEEecCCccccchhceeEEeccCHHHHhCCCeEEEECCCC
Confidence 6432111 1112111 000 00
Q ss_pred EEEEEecCccCCCCEEEECCCcCCCCCCCCCccEEEEEEEecCCcccccCCC
Q 012891 295 EVKVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGAD 346 (454)
Q Consensus 295 ~~~V~Ip~G~~~G~~i~~~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~D 346 (454)
..+|.||+|+++|++++|+|+|++...+..+|||||+|+|..++.+..+...
T Consensus 289 ~~~v~ip~g~~~g~~~~i~g~G~p~~~~~~~GDL~V~~~v~~P~~l~~~q~~ 340 (371)
T PRK14292 289 PQVIEVKPGTQHGDLHRLRGQGMPRLQGAGTGDLIVEYEIAVPKQLSPEARE 340 (371)
T ss_pred CEEEecCCCcCCCcEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHH
Confidence 3579999999999999999999987656678999999999988776554433
No 83
>PHA02624 large T antigen; Provisional
Probab=99.16 E-value=2.6e-11 Score=128.06 Aligned_cols=60 Identities=28% Similarity=0.557 Sum_probs=56.1
Q ss_pred CCCcccccCCCCCC--CHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHhhhhhhhhhhh
Q 012891 81 KRDPYELLGVPENA--SQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQY 144 (454)
Q Consensus 81 ~~~~Y~iLgv~~~a--~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~y 144 (454)
..++|++|||+++| +.+|||+|||++|++||||++++ +++|++|++||++|+|+.+|..|
T Consensus 10 ~~elyelLGL~~~A~gs~~eIKkAYRkLAkkyHPDKgGd----eekfk~Ln~AYevL~d~~k~~r~ 71 (647)
T PHA02624 10 SKELMDLLGLPMAAWGNLPLMRKAYLRKCKEYHPDKGGD----EEKMKRLNSLYKKLQEGVKSARQ 71 (647)
T ss_pred HHHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCc----HHHHHHHHHHHHHHhcHHHhhhc
Confidence 46899999999999 99999999999999999999753 57999999999999999999998
No 84
>PRK14295 chaperone protein DnaJ; Provisional
Probab=99.15 E-value=1.5e-10 Score=119.27 Aligned_cols=127 Identities=28% Similarity=0.537 Sum_probs=85.1
Q ss_pred EEEEEEeeccccCcceeee--eceeecccCCCCCCccCC-----CccccCCCccccceEEeCCccccCCCCCCceEEeee
Q 012891 207 VELVLSFAEAAKGCTKHVS--FDAFVPCDSCHGRGFPAD-----AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKD 279 (454)
Q Consensus 207 ~~l~itlee~~~G~~k~v~--~~~~~~C~~C~G~G~~~~-----~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~ 279 (454)
.++.++-...+.-|.-.-. -.....|+.|+|+|.... ....+|+.|+|+|.+. ...|..|.|.|.+.+.
T Consensus 159 k~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~~----~~~C~~C~G~g~~~~~ 234 (389)
T PRK14295 159 VPLRLTSQAPCPACSGTGAKNGTTPRVCPTCSGTGQVSRNSGGFSLSEPCPDCKGRGLIA----DDPCLVCKGSGRAKSS 234 (389)
T ss_pred EEEEeeccccCCCCcccccCCCCCCcCCCCCCCEeEEEEEecceEEEEecCCCcceeEEe----ccCCCCCCCCceEeee
Confidence 3455555555543433221 123468999999986432 2356999999999983 5689999999976432
Q ss_pred ecccccCC-ceeeceE---------------------------------------------------------------E
Q 012891 280 HCMTCKGS-GVVDGVK---------------------------------------------------------------E 295 (454)
Q Consensus 280 ~C~~C~g~-G~~~~~~---------------------------------------------------------------~ 295 (454)
.-.+.... |+..+.+ +
T Consensus 235 ~~l~V~Ip~G~~~G~~i~l~g~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~I~tldG~~ 314 (389)
T PRK14295 235 RTMQVRIPAGVSDGQRIRLRGKGAPGERGGPAGDLYVVVHVDPHPVFGRSGDNLTVTVPVTFPEAALGAEVRVPTLGGPP 314 (389)
T ss_pred eEEEEEeCCCCCCCCEEEEcccccCCCCCCCCccEEEEEEEecCCCEEEecCCEEEEEeecHHHHhCCCeEEEECCCCCE
Confidence 11111111 1111100 6
Q ss_pred EEEEecCccCCCCEEEECCCcCCCCCCCCCccEEEEEEEecCC
Q 012891 296 VKVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDP 338 (454)
Q Consensus 296 ~~V~Ip~G~~~G~~i~~~g~G~~~~~g~~~GDL~v~i~v~~h~ 338 (454)
++|.||+|+++|++++|+|+|++.. ++..|||||+|+|.-..
T Consensus 315 ~~v~ip~g~~~g~~iri~G~G~p~~-~~~~GDL~i~~~v~~P~ 356 (389)
T PRK14295 315 VTVKLPPGTPNGRVLRVRGKGAVRK-DGTRGDLLVTVEVAVPK 356 (389)
T ss_pred EEEEECCccCCCcEEEECCCCcCCC-CCCCCCEEEEEEEECCC
Confidence 8999999999999999999999863 45689999999999443
No 85
>PRK14291 chaperone protein DnaJ; Provisional
Probab=99.15 E-value=2.1e-10 Score=117.97 Aligned_cols=126 Identities=30% Similarity=0.539 Sum_probs=85.3
Q ss_pred EEEEEEeeccccCcceeee--eceeecccCCCCCCccCC-----CccccCCCccccceEEeCCccccCCCCCCceEEeee
Q 012891 207 VELVLSFAEAAKGCTKHVS--FDAFVPCDSCHGRGFPAD-----AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKD 279 (454)
Q Consensus 207 ~~l~itlee~~~G~~k~v~--~~~~~~C~~C~G~G~~~~-----~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~ 279 (454)
.++.++....+..|.-.-. -.....|+.|+|+|.... ....+|+.|+|+|.+ ...|..|+|.|.+.+.
T Consensus 149 ~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~-----~~~C~~C~G~g~v~~~ 223 (382)
T PRK14291 149 VSLEVPRYVPCEACGGTGYDPGSGEKVCPTCGGSGEIYQRGGFFRISQTCPTCGGEGVL-----REPCSKCNGRGLVIKK 223 (382)
T ss_pred EEEEEeeeccCCCCccccCCCCCCCccCCCCCCceEEEEecceEEEEecCCCCCCceEE-----ccCCCCCCCCceEEee
Confidence 4455555555544433221 123567999999996532 235799999999953 4679999999976442
Q ss_pred ecccccCC-ceeeceE---------------------------------------------------------------E
Q 012891 280 HCMTCKGS-GVVDGVK---------------------------------------------------------------E 295 (454)
Q Consensus 280 ~C~~C~g~-G~~~~~~---------------------------------------------------------------~ 295 (454)
.-.+.... |+..+.+ .
T Consensus 224 ~~l~V~Ip~G~~~G~~i~~~g~G~~~~~g~~~GDL~v~i~~~~h~~F~r~G~DL~~~~~Isl~eAl~G~~~~i~~ldG~~ 303 (382)
T PRK14291 224 ETIKVRIPPGVDNGSKLRVPGKGHAGRFGGPPGDLYIIVKVKPHPLFERRGDNLYLDVNITVAEAVLGTELEVPLLDGKK 303 (382)
T ss_pred eEEEEEeCCCCCCCCEEEEecCcCCCCCCCCCccEEEEEEEccCCCeeeecCCeEEEEEeeHHHHhCCCEEEEecCCCCE
Confidence 22222211 1111111 5
Q ss_pred EEEEecCccCCCCEEEECCCcCCCCCCCCCccEEEEEEEecC
Q 012891 296 VKVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADD 337 (454)
Q Consensus 296 ~~V~Ip~G~~~G~~i~~~g~G~~~~~g~~~GDL~v~i~v~~h 337 (454)
++|.||+|+++|++++|+|+|++...+..+|||||+|+|.-.
T Consensus 304 l~V~Ip~g~~~G~~i~i~G~G~p~~~~~~~GDL~V~~~V~~P 345 (382)
T PRK14291 304 EKVKIPPGTKEGDKIRVPGKGMPRLKGSGYGDLVVRVHIDVP 345 (382)
T ss_pred EEEEECCccCCCCEEEECCCCCCCCCCCCCCCEEEEEEEEeC
Confidence 899999999999999999999987555568999999999844
No 86
>PRK14277 chaperone protein DnaJ; Provisional
Probab=99.14 E-value=2e-10 Score=118.24 Aligned_cols=128 Identities=29% Similarity=0.550 Sum_probs=85.3
Q ss_pred EEEEEEeeccccCcceeee--eceeecccCCCCCCccCC---------CccccCCCccccceEEeCCccccCCCCCCceE
Q 012891 207 VELVLSFAEAAKGCTKHVS--FDAFVPCDSCHGRGFPAD---------AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGR 275 (454)
Q Consensus 207 ~~l~itlee~~~G~~k~v~--~~~~~~C~~C~G~G~~~~---------~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~ 275 (454)
.+|.++....+.-|.-.-. -.....|+.|+|+|.... ....+|+.|+|+|.+ +...|..|+|.|.
T Consensus 148 ~~v~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~----~~~~C~~C~G~g~ 223 (386)
T PRK14277 148 KEIEVERFEKCDVCKGSGAKPGSKPVTCPVCHGTGQVRTRQNTPFGRIVNIRTCDRCHGEGKI----ITDPCNKCGGTGR 223 (386)
T ss_pred EEEEEEeeccCCCCCCCCcCCCCCCccCCCCCCEEEEEEEEeccCceEEEEEECCCCCcceee----ccCCCCCCCCCcE
Confidence 3455555555443322211 123468999999996431 124699999999998 3568999999998
Q ss_pred EeeeecccccCC-ceeeceE------------------------------------------------------------
Q 012891 276 IIKDHCMTCKGS-GVVDGVK------------------------------------------------------------ 294 (454)
Q Consensus 276 ~~~~~C~~C~g~-G~~~~~~------------------------------------------------------------ 294 (454)
+.+..-.+.... |+..+.+
T Consensus 224 v~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tl 303 (386)
T PRK14277 224 IRRRRKIKVNIPAGIDDGQMITLRGEGEPGIKGGPNGDLYIVIKVKPHPLFKREGYNVYLEMPITFTDAALGGEIEIPTL 303 (386)
T ss_pred EeeeeEEEEecCCCccCCcEEEEccccccCCCCCCCccEEEEEEEecCCCeEEecCCEEEEEEcCHHHHhCCCEEEEEcC
Confidence 744222222211 1111110
Q ss_pred --EEEEEecCccCCCCEEEECCCcCCCCCCCCCccEEEEEEEecCC
Q 012891 295 --EVKVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDP 338 (454)
Q Consensus 295 --~~~V~Ip~G~~~G~~i~~~g~G~~~~~g~~~GDL~v~i~v~~h~ 338 (454)
.++|.||+|+++|++++|+|+|.+...+...|||||+|+|.-..
T Consensus 304 dG~~~v~ip~g~~~g~~~ri~g~G~p~~~~~~~GDL~v~~~V~~P~ 349 (386)
T PRK14277 304 DGKVKFTIPEGTQTGTKFRLRGKGIPHLRGRGRGDQIVKVYIEVPK 349 (386)
T ss_pred CCCEEEEECCCCCCCCEEEECCCCCCCCCCCCCCCEEEEEEEEeCC
Confidence 46899999999999999999999865445679999999998443
No 87
>PRK14296 chaperone protein DnaJ; Provisional
Probab=99.13 E-value=2.5e-10 Score=116.94 Aligned_cols=128 Identities=20% Similarity=0.479 Sum_probs=84.5
Q ss_pred EEEEEEeeccccCcceeeee--ceeecccCCCCCCccCCC---------ccccCCCccccceEEeCCccccCCCCCCceE
Q 012891 207 VELVLSFAEAAKGCTKHVSF--DAFVPCDSCHGRGFPADA---------KTKICSTCRGIGRVTIPPFTSTCSTCKGLGR 275 (454)
Q Consensus 207 ~~l~itlee~~~G~~k~v~~--~~~~~C~~C~G~G~~~~~---------~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~ 275 (454)
..+.++....+..|.-.-.- .....|+.|+|+|..... ...+|+.|+|+|.+ +...|+.|+|.|.
T Consensus 142 ~~i~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~g~~~~q~~~~C~~C~G~G~~----~~~~C~~C~G~g~ 217 (372)
T PRK14296 142 KIIELDLLTNCSKCFGSGAESNSDIHICNNCHGTGEVLVQKNMGFFQFQQSAKCNVCNGAGKI----IKNKCKNCKGKGK 217 (372)
T ss_pred EEEEEeeeeccCCCCCCccCCCCCCccCCCCCCCceEEEEEeccceEEEEEecCCCcCCccee----ecccccCCCCceE
Confidence 44555555555444433221 234679999999975422 24689999999998 3577999999997
Q ss_pred EeeeecccccCC-ceeeceE------------------------------------------------------------
Q 012891 276 IIKDHCMTCKGS-GVVDGVK------------------------------------------------------------ 294 (454)
Q Consensus 276 ~~~~~C~~C~g~-G~~~~~~------------------------------------------------------------ 294 (454)
+.+..-.+.... |+..+.+
T Consensus 218 v~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~v~v~v~~h~~F~R~~G~DL~~~~~Isl~eAllG~~~~i~t 297 (372)
T PRK14296 218 YLERKKIEVNIPKGIRPNQQIKLSQKGHASLNNGVNGDLIIDIYLKESKVFEIINNNDILMTYNISYLDAILGNEIIIKT 297 (372)
T ss_pred EEEEEEEEEEECCCCCCCCEEEEeccccCCCCCCCCccEEEEEEEeCCCCEEEeCCCcEEEEEecCHHHHhCCCEEEeeC
Confidence 643211111110 1110000
Q ss_pred ---EEEEEecCccCCCCEEEECCCcCCCC-CCCCCccEEEEEEEecCC
Q 012891 295 ---EVKVTIPAGVDSGDTIRVPEAGNAGG-RGRQHGNLFIKLKVADDP 338 (454)
Q Consensus 295 ---~~~V~Ip~G~~~G~~i~~~g~G~~~~-~g~~~GDL~v~i~v~~h~ 338 (454)
.++|.||+|+++|++++|+|+|.+.. .+...|||||+|+|.-..
T Consensus 298 ldG~~~v~ip~~t~~g~~~ri~GkGmP~~~~~~~~GDL~V~~~V~~P~ 345 (372)
T PRK14296 298 LDGDIKYKLPKSINSNELIIINNKGLYKSINKDKRGDLIIKVNIVVPK 345 (372)
T ss_pred CCCCEEEEECCccCCCcEEEEcCCCCCcCCCCCCcCCEEEEEEEECCC
Confidence 57899999999999999999999733 234579999999999443
No 88
>PF00684 DnaJ_CXXCXGXG: DnaJ central domain; InterPro: IPR001305 The hsp70 chaperone machine performs many diverse roles in the cell, including folding of nascent proteins, translocation of polypeptides across organelle membranes, coordinating responses to stress, and targeting selected proteins for degradation. DnaJ is a member of the hsp40 family of molecular chaperones, which is also called the J-protein family, the members of which regulate the activity of hsp70s. DnaJ (hsp40) binds to DnaK (hsp70) and stimulates its ATPase activity, generating the ADP-bound state of DnaK, which interacts stably with the polypeptide substrate []. Besides stimulating the ATPase activity of DnaK through its J-domain, DnaJ also associates with unfolded polypeptide chains and prevents their aggregation []. DnaJ consists of an N-terminal conserved domain (called 'J' domain) of about 70 amino acid residues, a glycine and phenylalanine-rich domain ('G/F' domain), a central cysteine rich domain (CR-type zinc finger) containing four repeats of a CXXCXGXG motif which can coordinate two zinc atom and a C-terminal domain (CTD) []. This entry represents the central cysteine-rich (CR) domain of DnaJ proteins. This central cysteine rich domain (CR-type zinc finger) has an overall V-shaped extended beta-hairpin topology and contains four repeats of the motif CXXCXGXG where X is any amino acid. The isolated cysteine rich domain folds in zinc dependent fashion. Each set of two repeats binds one unit of zinc. Although this domain has been implicated in substrate binding, no evidence of specific interaction between the isolated DnaJ cysteine rich domain and various hydrophobic peptides has been found [].; GO: 0031072 heat shock protein binding, 0051082 unfolded protein binding; PDB: 1NLT_A 2CTT_A 1EXK_A.
Probab=99.11 E-value=4.9e-11 Score=91.67 Aligned_cols=57 Identities=49% Similarity=1.036 Sum_probs=44.9
Q ss_pred ccCCCCCCccCCCccccCCCccccceEEeC--------CccccCCCCCCceEEe-eeecccccCCc
Q 012891 232 CDSCHGRGFPADAKTKICSTCRGIGRVTIP--------PFTSTCSTCKGLGRII-KDHCMTCKGSG 288 (454)
Q Consensus 232 C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~--------~~~~~C~~C~G~G~~~-~~~C~~C~g~G 288 (454)
|+.|+|+|...+....+|+.|+|+|.++.. .++.+|+.|+|+|++| +++|+.|+|.|
T Consensus 1 C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~~~~~~~~~C~~C~G~G~~i~~~~C~~C~G~g 66 (66)
T PF00684_consen 1 CPKCNGTGAKPGKKPKTCPQCNGSGQVTRRQQTPGGVFQMQQTCPKCGGTGKIIEKDPCKTCKGSG 66 (66)
T ss_dssp -CCCTTTSB-STTT-EE-TTSSSSSEEEEEEESSSTTEEEEEE-TTTSSSSEE-TSSB-SSSTTSS
T ss_pred CCcCCCcccCCCCCCcCCcCCCCeeEEEEEEeCCCeEEEEEEECCCCcceeeEECCCCCCCCCCcC
Confidence 889999999999999999999999998642 2478999999999999 99999999976
No 89
>PTZ00037 DnaJ_C chaperone protein; Provisional
Probab=99.10 E-value=3.8e-10 Score=116.93 Aligned_cols=108 Identities=27% Similarity=0.565 Sum_probs=78.2
Q ss_pred eeecccCCCCCCccCC---------CccccCCCccccceEEeCCccccCCCCCCceEEeeeecccccCC-ceeeceE---
Q 012891 228 AFVPCDSCHGRGFPAD---------AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTCKGS-GVVDGVK--- 294 (454)
Q Consensus 228 ~~~~C~~C~G~G~~~~---------~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~C~~C~g~-G~~~~~~--- 294 (454)
....|+.|+|+|.... ....+|+.|+|+|.+.. ....|..|+|.|.+.+..-.+.... |+..+.+
T Consensus 165 ~~~~C~~C~G~G~~~~~~~~g~~~~q~~~~C~~C~G~G~~i~--~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~dG~~I~~ 242 (421)
T PTZ00037 165 AFVDCKLCNGQGIRVQIRQMGSMIHQTQSTCNSCNGQGKIIP--ESKKCKNCSGKGVKKTRKILEVNIDKGVPNQHKITF 242 (421)
T ss_pred CCccCCCCCCCCeEEEEEeecceeeEEEEeCCCCCCcceecc--ccccCCcCCCcceeeeeeEEEEeeCCCCCCCcEEEE
Confidence 4578999999996321 23569999999998742 2468999999998754332333322 2222111
Q ss_pred -----------------------------------------------------------EEEEEecCc--cCCCCEEEEC
Q 012891 295 -----------------------------------------------------------EVKVTIPAG--VDSGDTIRVP 313 (454)
Q Consensus 295 -----------------------------------------------------------~~~V~Ip~G--~~~G~~i~~~ 313 (454)
.++|.|||| +++|++++|+
T Consensus 243 ~G~Gd~~~~~~pGDLiv~I~~~ph~~F~R~G~DL~~~~~Isl~eAllG~~i~I~tLdG~~l~I~ip~g~vt~pg~~~~I~ 322 (421)
T PTZ00037 243 HGEADEKPNEIPGNVVFILNEKPHDTFKREGGDLFITKKISLYEALTGFVFYITHLDGRKLLVNTPPGEVVKPGDIKVIN 322 (421)
T ss_pred ecccCCCCCCCCCcEEEEEEecCCCCcEEeCCeEEEEEeCCHHHHhcCCEEEeeCCCCCeEEEEeCCCcccCCCcEEEeC
Confidence 589999999 9999999999
Q ss_pred CCcCCCCCC-CCCccEEEEEEEecC
Q 012891 314 EAGNAGGRG-RQHGNLFIKLKVADD 337 (454)
Q Consensus 314 g~G~~~~~g-~~~GDL~v~i~v~~h 337 (454)
|+|++...+ ...|||||+|+|.-.
T Consensus 323 geGmP~~~~~~~rGDL~V~~~V~~P 347 (421)
T PTZ00037 323 NEGMPTYKSPFKKGNLYVTFEVIFP 347 (421)
T ss_pred CCCcccCCCCCCCCCEEEEEEEEcC
Confidence 999986443 357999999999843
No 90
>PRK01773 hscB co-chaperone HscB; Provisional
Probab=99.10 E-value=1.4e-10 Score=105.76 Aligned_cols=68 Identities=26% Similarity=0.419 Sum_probs=58.9
Q ss_pred CCcccccCCCCC--CCHHHHHHHHHHHHHHhCCCCCCCChh-----HHHHHHHHHHHHHhhhhhhhhhhhccccc
Q 012891 82 RDPYELLGVPEN--ASQDEIKKAFHMLAKQYHPDANKNNPS-----AKRKFQEIRDAYETLRDSEKRAQYDRRRS 149 (454)
Q Consensus 82 ~~~Y~iLgv~~~--a~~~eIk~ayr~la~~~HPD~~~~~~~-----a~~~f~~i~~Ay~vL~d~~~r~~yd~~~~ 149 (454)
.|||++||+++. .+..+++++|++|++++|||+....+. +.+.-..||+||.+|+||.+|+.|=-...
T Consensus 2 ~nyF~lf~lp~~F~iD~~~L~~~y~~Lq~~~HPD~f~~~~~~eq~~a~~~ss~iN~AY~tLkdPl~RA~YLL~L~ 76 (173)
T PRK01773 2 NNPFALFDLPVDFQLDNALLSERYLALQKSLHPDNFANSSAQEQRLAMQKSAEVNDALQILKDPILRAEAIIALN 76 (173)
T ss_pred CChHHhcCCCCCCCCCHHHHHHHHHHHHHHhCcCcccCCCHHHHHHHHHHHHHHHHHHHHHCChHHHHHHHHHhc
Confidence 599999999985 899999999999999999999876543 34456799999999999999999977533
No 91
>PRK14283 chaperone protein DnaJ; Provisional
Probab=99.09 E-value=2.5e-10 Score=117.33 Aligned_cols=105 Identities=32% Similarity=0.601 Sum_probs=75.8
Q ss_pred eecccCCCCCCccCC---------CccccCCCccccceEEeCCccccCCCCCCceEEeeeecccccC-------------
Q 012891 229 FVPCDSCHGRGFPAD---------AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTCKG------------- 286 (454)
Q Consensus 229 ~~~C~~C~G~G~~~~---------~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~C~~C~g------------- 286 (454)
...|+.|.|+|.... ....+|+.|+|+|.. ....|..|+|+|.+.+..-..+..
T Consensus 163 ~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~----~~~~C~~C~G~g~v~~~~~l~V~IppG~~~G~~i~l~ 238 (378)
T PRK14283 163 VKTCPTCGGTGQVKQVRNTILGQMMNVTTCPDCQGEGKI----VEKPCSNCHGKGVVRETKTISVKIPAGVETGSRLRVS 238 (378)
T ss_pred CccCCCcCCccEEEEEEeccCceEEEEEECCCCCcccee----cCCCCCCCCCceeeccceeEEEEECCCCCCCcEEEEe
Confidence 467999999998531 124699999999987 356799999999864422222111
Q ss_pred -Cce------------eece-E------------------------------------EEEEEecCccCCCCEEEECCCc
Q 012891 287 -SGV------------VDGV-K------------------------------------EVKVTIPAGVDSGDTIRVPEAG 316 (454)
Q Consensus 287 -~G~------------~~~~-~------------------------------------~~~V~Ip~G~~~G~~i~~~g~G 316 (454)
.|. +.-. + +++|.||+|+++|++++|+|+|
T Consensus 239 g~G~~~~~~~~~GDLiv~i~v~~~~~f~r~G~DL~~~~~Isl~eAl~G~~~~i~tldG~i~v~ip~g~~~g~~~ri~g~G 318 (378)
T PRK14283 239 GEGEMGDRGGEPGDLYVVIKVKPHKIFRREGANLYYEKPISFVQAALGDTVDVPTIDGPVELKIPAGTQSGTTFRLKGHG 318 (378)
T ss_pred ccccCCCCCCCCccEEEEEEEEcCCCEEEecCCEEEEEecCHHHHhcCCeEEEEcCCceEEEEeCCCCCCCCEEEECCCC
Confidence 110 0000 0 5789999999999999999999
Q ss_pred CCCCCCCCCccEEEEEEEecC
Q 012891 317 NAGGRGRQHGNLFIKLKVADD 337 (454)
Q Consensus 317 ~~~~~g~~~GDL~v~i~v~~h 337 (454)
.+...+...|||||+|+|.-.
T Consensus 319 ~p~~~~~~~GdL~v~~~v~~P 339 (378)
T PRK14283 319 MPSLRWSGKGNLYVKVKVVVP 339 (378)
T ss_pred CCCCCCCCCCCEEEEEEEEeC
Confidence 986544567999999999843
No 92
>COG5407 SEC63 Preprotein translocase subunit Sec63 [Intracellular trafficking and secretion]
Probab=99.08 E-value=9e-11 Score=117.67 Aligned_cols=70 Identities=33% Similarity=0.640 Sum_probs=63.8
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCC-----ChhHHHHHHHHHHHHHhhhhhhhhhhhcccccC
Q 012891 81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKN-----NPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSR 150 (454)
Q Consensus 81 ~~~~Y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~-----~~~a~~~f~~i~~Ay~vL~d~~~r~~yd~~~~~ 150 (454)
.-|||+||||+.+++..+||++||+|..++||||.++ ..+-++++.+|++||+.|+|...|..|-.||..
T Consensus 97 ~fDPyEILGI~~~ts~rdik~~yr~Ls~KfhpdK~~~mvn~~rse~Ee~y~~ItkAY~~lTd~k~renyl~yGtP 171 (610)
T COG5407 97 GFDPYEILGIDQDTSERDIKKRYRMLSMKFHPDKAPPMVNELRSEYEEKYKTITKAYGLLTDKKRRENYLNYGTP 171 (610)
T ss_pred CCChHHhhcccCCCcHHHHHHHHHhheeecChhhcCCCChhHHHHHHHHHHHHHHHHHhhhhHHHHHHHHhcCCC
Confidence 4699999999999999999999999999999999875 135788999999999999999999999999754
No 93
>TIGR00714 hscB Fe-S protein assembly co-chaperone HscB. This model describes the small subunit, Hsc20 (20K heat shock cognate protein) of a pair of proteins Hsc66-Hsc20, related to the DnaK-DnaJ heat shock proteins, which also serve as molecular chaperones. Hsc20, unlike DnaJ, appears not to have chaperone activity on its own, but to act solely as a regulatory subunit for Hsc66 (i.e., to be a co-chaperone). The gene for Hsc20 in E. coli, hscB, is not induced by heat shock.
Probab=99.00 E-value=5.4e-10 Score=100.66 Aligned_cols=57 Identities=26% Similarity=0.435 Sum_probs=49.1
Q ss_pred CCCHHHHHHHHHHHHHHhCCCCCCCCh-----hHHHHHHHHHHHHHhhhhhhhhhhhccccc
Q 012891 93 NASQDEIKKAFHMLAKQYHPDANKNNP-----SAKRKFQEIRDAYETLRDSEKRAQYDRRRS 149 (454)
Q Consensus 93 ~a~~~eIk~ayr~la~~~HPD~~~~~~-----~a~~~f~~i~~Ay~vL~d~~~r~~yd~~~~ 149 (454)
+.+..+|+++||+|++++|||+..+.. .+.+.|+.||+||++|+||.+|+.|+....
T Consensus 2 ~iD~~~L~~~yr~lq~~~HPD~~~~~~~~~~~~a~~~s~~iN~AY~~L~~p~~Ra~ylL~l~ 63 (157)
T TIGR00714 2 QLDTQALSLRYQDLQRQYHPDKFASGSAQEQLAAVQQSTTLNQAYQTLKDPLMRAEYMLSLH 63 (157)
T ss_pred CCCHHHHHHHHHHHHHHHCcCCCCCCChhhhHHHHHHHHHHHHHHHHhCChhhhHHHHHHhc
Confidence 357889999999999999999975433 266789999999999999999999998643
No 94
>KOG1150 consensus Predicted molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=98.91 E-value=1.4e-09 Score=98.46 Aligned_cols=66 Identities=26% Similarity=0.527 Sum_probs=59.4
Q ss_pred CCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCC-hhHHHHHHHHHHHHHhhhhhhhhhhhc
Q 012891 80 SKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNN-PSAKRKFQEIRDAYETLRDSEKRAQYD 145 (454)
Q Consensus 80 ~~~~~Y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~-~~a~~~f~~i~~Ay~vL~d~~~r~~yd 145 (454)
-+-|+|+||.|.++.+.++||+.||+|++..|||+|+++ +.|...|..|..||..|-|+..|..-+
T Consensus 51 fnLNpfeVLqIdpev~~edikkryRklSilVHPDKN~Dd~~rAqkAFdivkKA~k~l~n~~~rkr~~ 117 (250)
T KOG1150|consen 51 FNLNPFEVLQIDPEVTDEDIKKRYRKLSILVHPDKNPDDAERAQKAFDIVKKAYKLLENDKIRKRCL 117 (250)
T ss_pred cccChHHHHhcCCCCCHHHHHHHHHhhheeecCCCCcccHHHHHHHHHHHHHHHHHHhCHHHHHHHH
Confidence 457999999999999999999999999999999999988 568899999999999999998554433
No 95
>PRK14299 chaperone protein DnaJ; Provisional
Probab=98.80 E-value=1.8e-08 Score=100.09 Aligned_cols=70 Identities=33% Similarity=0.564 Sum_probs=62.5
Q ss_pred ccccCCCeEEEEeeCHHHHhCCCEEEEeCCCCE-EEEEeCCCCCCCcEEEEcCCCcCCCCCCCCCCcEEEEEEEECCCC
Q 012891 340 FSRDGADVYVDSNISFTQAILGGKVDVPTLSGK-VQVKIPKGVQPGQLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPTA 417 (454)
Q Consensus 340 f~R~G~DL~~~~~Isl~eAllG~~~~i~tldG~-~~v~ip~~~~~g~~~~l~g~Gmp~~~~~~~rGdL~v~~~V~~P~~ 417 (454)
+.|+|+||++++.|+|.||++|++++| +++|+ ++|+||+|+.+|++++++|+|++. |||||+|+|.-+..
T Consensus 125 ~~~~g~dl~~~l~isL~ea~~G~~~~i-~l~g~~~~V~Ip~G~~~G~~ir~~g~G~~~-------GDL~v~i~v~~h~~ 195 (291)
T PRK14299 125 RARKGRDLEAELPLTLEEAYRGGEKVV-EVAGERLSVRIPPGVREGQVIRLAGKGRQG-------GDLYLVVRLLPHPV 195 (291)
T ss_pred CCCCCCCEEEEEEecHHHHhCCCeEEE-eeCCEEEEEecCCCcCCCcEEEECCCCCCC-------CCEEEEEEEcCCCC
Confidence 357899999999999999999999998 67774 799999999999999999999872 99999999886544
No 96
>COG5269 ZUO1 Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones]
Probab=98.72 E-value=7.4e-09 Score=97.88 Aligned_cols=74 Identities=34% Similarity=0.423 Sum_probs=64.0
Q ss_pred CCCCCCCCCcccccCCCC---CCCHHHHHHHHHHHHHHhCCCCC--CCChhHHHHHHHHHHHHHhhhhhhhhhhhcccc
Q 012891 75 GSCYSSKRDPYELLGVPE---NASQDEIKKAFHMLAKQYHPDAN--KNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRR 148 (454)
Q Consensus 75 ~~~~~~~~~~Y~iLgv~~---~a~~~eIk~ayr~la~~~HPD~~--~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yd~~~ 148 (454)
....+...|+|.+|||+. .|++.+|.+|.++.+.+||||+. +++-...+.|+.|+.||+||+|+.+|.+||..-
T Consensus 36 d~k~Wk~~DlYa~lgLskyR~ka~~~qi~kah~kkv~kyHPDk~aa~g~~~~d~fFk~iqkA~evL~D~~~R~qyDS~d 114 (379)
T COG5269 36 DFKNWKKVDLYALLGLSKYRTKAIPPQILKAHKKKVYKYHPDKTAAGGNKGCDEFFKLIQKAREVLGDRKLRLQYDSND 114 (379)
T ss_pred hhhhhhhhhHHHHhchHhhhcCCCcHHHHHHHHHHHHHhCccchhccCCCCcHHHHHHHHHHHHHhccHHHHhhccccc
Confidence 445577799999999987 68999999999999999999996 223345789999999999999999999999863
No 97
>PRK10266 curved DNA-binding protein CbpA; Provisional
Probab=98.62 E-value=1.4e-07 Score=94.40 Aligned_cols=74 Identities=26% Similarity=0.505 Sum_probs=60.9
Q ss_pred ccCCCeEEEEeeCHHHHhCCCEEEE----eCCC--C--------EEEEEeCCCCCCCcEEEEcCCCcCCCCCCCCCCcEE
Q 012891 342 RDGADVYVDSNISFTQAILGGKVDV----PTLS--G--------KVQVKIPKGVQPGQLLVLRGKGLAKNGLFLDHGDQY 407 (454)
Q Consensus 342 R~G~DL~~~~~Isl~eAllG~~~~i----~tld--G--------~~~v~ip~~~~~g~~~~l~g~Gmp~~~~~~~rGdL~ 407 (454)
++|.||++++.|+|.||+.|+..+| ++++ | .++|+||+|+++|++++++|+|+|.... ..+||||
T Consensus 115 ~kg~di~~~v~isLee~~~G~~k~i~~~~~~~~g~G~~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~~-~~~GDl~ 193 (306)
T PRK10266 115 ARGHDIEIEVAVFLEETLTEHKRTISYNLPVYNAFGMIEQEIPKTLNVKIPAGVGNGQRIRLKGQGTPGENG-GPNGDLW 193 (306)
T ss_pred CCCCceEEEEEEEHHHhcCCceEEEEEecccccCCCeEEEeeeEEEEEEECCCCcCCcEEEEecCCcCCCCC-CCCccEE
Confidence 5789999999999999999996544 4444 3 3688999999999999999999996522 2469999
Q ss_pred EEEEEECCCC
Q 012891 408 VRFRVNFPTA 417 (454)
Q Consensus 408 v~~~V~~P~~ 417 (454)
|+|+|. |..
T Consensus 194 v~i~v~-ph~ 202 (306)
T PRK10266 194 LVIHIA-PHP 202 (306)
T ss_pred EEEEEc-CCC
Confidence 999999 653
No 98
>PF01556 CTDII: DnaJ C terminal domain; InterPro: IPR002939 Molecular chaperones are a diverse family of proteins that function to protect proteins in the intracellular milieu from irreversible aggregation during synthesis and in times of cellular stress. The bacterial molecular chaperone DnaK is an enzyme that couples cycles of ATP binding, hydrolysis, and ADP release by an N-terminal ATP-hydrolizing domain to cycles of sequestration and release of unfolded proteins by a C-terminal substrate binding domain. Dimeric GrpE is the co-chaperone for DnaK, and acts as a nucleotide exchange factor, stimulating the rate of ADP release 5000-fold []. DnaK is itself a weak ATPase; ATP hydrolysis by DnaK is stimulated by its interaction with another co-chaperone, DnaJ. Thus the co-chaperones DnaJ and GrpE are capable of tightly regulating the nucleotide-bound and substrate-bound state of DnaK in ways that are necessary for the normal housekeeping functions and stress-related functions of the DnaK molecular chaperone cycle. Besides stimulating the ATPase activity of DnaK through its J-domain, DnaJ also associates with unfolded polypeptide chains and prevents their aggregation []. Thus, DnaK and DnaJ may bind to one and the same polypeptide chain to form a ternary complex. The formation of a ternary complex may result in cis-interaction of the J-domain of DnaJ with the ATPase domain of DnaK. An unfolded polypeptide may enter the chaperone cycle by associating first either with ATP-liganded DnaK or with DnaJ. DnaK interacts with both the backbone and side chains of a peptide substrate; it thus shows binding polarity and admits only L-peptide segments. In contrast, DnaJ has been shown to bind both L- and D-peptides and is assumed to interact only with the side chains of the substrate. This domain consists of the C-terminal region of the DnaJ protein. The function of this domain is unknown. It is found associated with IPR001623 from INTERPRO and IPR001305 from INTERPRO. ; GO: 0051082 unfolded protein binding, 0006457 protein folding; PDB: 2Q2G_A 2QLD_A 3AGX_A 3AGZ_A 3AGY_A 3I38_J 3LZ8_B 2B26_B 1C3G_A 1XAO_B ....
Probab=98.55 E-value=1.3e-07 Score=75.68 Aligned_cols=45 Identities=29% Similarity=0.608 Sum_probs=35.3
Q ss_pred EEEEEEecCccCCCCEEEECCCcCCCCCCC-CCccEEEEEEEecCC
Q 012891 294 KEVKVTIPAGVDSGDTIRVPEAGNAGGRGR-QHGNLFIKLKVADDP 338 (454)
Q Consensus 294 ~~~~V~Ip~G~~~G~~i~~~g~G~~~~~g~-~~GDL~v~i~v~~h~ 338 (454)
++++|.||+|+++|+.++++|+|.+...+. ..|||||+++|.-..
T Consensus 27 ~~~~i~ip~~~~~g~~~~i~g~G~p~~~~~~~~GdL~v~~~V~~P~ 72 (81)
T PF01556_consen 27 KTIKIKIPPGTQPGQQLRIKGKGMPKPKGGGKRGDLIVKFEVEFPK 72 (81)
T ss_dssp -EEEEEETST-STT-EEEETTESEEESSSTTSBEEEEEEEEEE--S
T ss_pred CEEEEeccCccCCCcEEeecCCCCCcCCCCCCcCCEEEEEEEECCC
Confidence 577899999999999999999999765554 799999999998443
No 99
>PLN03165 chaperone protein dnaJ-related; Provisional
Probab=98.36 E-value=3.3e-07 Score=77.08 Aligned_cols=55 Identities=40% Similarity=0.929 Sum_probs=45.7
Q ss_pred eeecccCCCCCCccCCCccccCCCccccceEEeC-----CccccCCCCCCceEEeeeecccccCCceee
Q 012891 228 AFVPCDSCHGRGFPADAKTKICSTCRGIGRVTIP-----PFTSTCSTCKGLGRIIKDHCMTCKGSGVVD 291 (454)
Q Consensus 228 ~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~-----~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~ 291 (454)
..+.|..|+|+|. .+|+.|+|+|.+... ....+|+.|+|+|+. .|..|.|.|++.
T Consensus 40 ~~v~C~~C~GsG~------~~C~~C~G~G~v~~~~~g~~q~~~~C~~C~G~Gk~---~C~~C~G~G~~~ 99 (111)
T PLN03165 40 NTQPCFPCSGTGA------QVCRFCVGSGNVTVELGGGEKEVSKCINCDGAGSL---TCTTCQGSGIQP 99 (111)
T ss_pred cCCCCCCCCCCCC------cCCCCCcCcCeEEEEeCCcEEEEEECCCCCCccee---eCCCCCCCEEEe
Confidence 4578999999997 389999999987542 236789999999975 499999999764
No 100
>KOG0712 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=98.34 E-value=9.1e-07 Score=88.01 Aligned_cols=43 Identities=33% Similarity=0.449 Sum_probs=37.9
Q ss_pred EEEEEecCc--cCCCCEEEECCCcCCCCCCCCCccEEEEEEEecCC
Q 012891 295 EVKVTIPAG--VDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDP 338 (454)
Q Consensus 295 ~~~V~Ip~G--~~~G~~i~~~g~G~~~~~g~~~GDL~v~i~v~~h~ 338 (454)
.+++.++|| +.+|++.+++|+|++..... .|||||.+.|+-.+
T Consensus 280 ~l~~~~~pg~vi~~~~~~~v~~~gmp~~~~~-~g~lyi~~~v~fp~ 324 (337)
T KOG0712|consen 280 LLKLSSKPGEVISPGDTKRVEGEGMPIFRNP-KGDLYIKFEVKFPK 324 (337)
T ss_pred eEEEecCCCceeChhHEEeecCCCcccccCC-CCcEEEEEEEEcCC
Confidence 688999999 99999999999999987555 99999999999443
No 101
>KOG1789 consensus Endocytosis protein RME-8, contains DnaJ domain [Intracellular trafficking, secretion, and vesicular transport; Posttranslational modification, protein turnover, chaperones]
Probab=98.29 E-value=8e-07 Score=97.13 Aligned_cols=58 Identities=29% Similarity=0.477 Sum_probs=49.0
Q ss_pred CCCCCCCCcccccCCCCC----CCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHhhh
Q 012891 76 SCYSSKRDPYELLGVPEN----ASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLR 136 (454)
Q Consensus 76 ~~~~~~~~~Y~iLgv~~~----a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~ 136 (454)
+..++..+.|+||.|+-+ -..+.||++|++||.+||||||+ +..++|..+|+|||.|+
T Consensus 1275 P~~mS~d~A~eiL~i~l~n~~hD~~~KirrqY~kLA~kYHPDKNP---EGRemFe~VnKAYE~L~ 1336 (2235)
T KOG1789|consen 1275 PATMSVDLAREILSVDLTNEEHDKPAKIRRQYYKLAAKYHPDKNP---EGREMFERVNKAYELLS 1336 (2235)
T ss_pred CCccchHHHHHHhccccCCCCcccHHHHHHHHHHHHHHhCCCCCc---hHHHHHHHHHHHHHHHH
Confidence 445566789999999753 23478999999999999999995 56899999999999999
No 102
>KOG0568 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=98.27 E-value=7.6e-07 Score=82.59 Aligned_cols=57 Identities=37% Similarity=0.683 Sum_probs=50.4
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHH-hhhhh
Q 012891 81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYE-TLRDS 138 (454)
Q Consensus 81 ~~~~Y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~-vL~d~ 138 (454)
-+.+|.+|||..+|+.+|++.||..||+++|||...+. ...++|.+|.+||. ||+..
T Consensus 46 ~~e~fril~v~e~~~adevr~af~~lakq~hpdsgs~~-adaa~f~qideafrkvlq~~ 103 (342)
T KOG0568|consen 46 IMECFRILGVEEGADADEVREAFHDLAKQVHPDSGSEE-ADAARFIQIDEAFRKVLQEK 103 (342)
T ss_pred HHHHHHHhcccccCchhHHHHHHHHHHHHcCCCCCCcc-ccHHHHHHHHHHHHHHHHHH
Confidence 36899999999999999999999999999999988653 44578999999998 88754
No 103
>TIGR02642 phage_xxxx uncharacterized phage protein. This uncharacterized protein is found in prophage regions of Shewanella oneidensis MR-1, Vibrio vulnificus YJ016, Yersinia pseudotuberculosis IP 32953, and Aeromonas hydrophila ATCC7966. It appears to have regions of sequence similarity to phage lambda antitermination protein Q.
Probab=98.07 E-value=4.1e-06 Score=76.96 Aligned_cols=48 Identities=35% Similarity=0.663 Sum_probs=41.3
Q ss_pred ccCCCCCCceEEee--eecccccCCceeeceEEEEEEecCccCCCCEEEEC
Q 012891 265 STCSTCKGLGRIIK--DHCMTCKGSGVVDGVKEVKVTIPAGVDSGDTIRVP 313 (454)
Q Consensus 265 ~~C~~C~G~G~~~~--~~C~~C~g~G~~~~~~~~~V~Ip~G~~~G~~i~~~ 313 (454)
.+|+.|+|+|++++ .+|+.|+|.|.+..++.+.+.+ .|+.+|++|++.
T Consensus 100 ~~C~~C~G~G~~i~~~~~C~~C~G~G~v~~~~~~~~k~-~g~~~g~~it~~ 149 (186)
T TIGR02642 100 CKCPRCRGTGLIQRRQRECDTCAGTGRFRPTVEDLLKS-FGVDSGAAIVLK 149 (186)
T ss_pred CcCCCCCCeeEEecCCCCCCCCCCccEEeeeEEEEEEe-eeccCCceeeHH
Confidence 46777777787776 6899999999999999999999 999999999875
No 104
>KOG0723 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=97.77 E-value=2.9e-05 Score=63.81 Aligned_cols=58 Identities=28% Similarity=0.394 Sum_probs=48.2
Q ss_pred CCCCCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHhhhhh
Q 012891 77 CYSSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDS 138 (454)
Q Consensus 77 ~~~~~~~~Y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~ 138 (454)
+.+..+..-.||||++.++.+.||.|+|+.....|||+.+. |- .=.+||||+++|...
T Consensus 51 ~kMsr~EA~lIL~v~~s~~k~KikeaHrriM~~NHPD~GGS-PY---lAsKINEAKdlLe~~ 108 (112)
T KOG0723|consen 51 PKMSRREAALILGVTPSLDKDKIKEAHRRIMLANHPDRGGS-PY---LASKINEAKDLLEGT 108 (112)
T ss_pred cccchHHHHHHhCCCccccHHHHHHHHHHHHHcCCCcCCCC-HH---HHHHHHHHHHHHhcc
Confidence 34556777889999999999999999999999999999974 42 123699999999754
No 105
>TIGR03835 termin_org_DnaJ terminal organelle assembly protein TopJ. This model describes TopJ (MG_200, CbpA), a DnaJ homolog and probable assembly protein of the Mycoplasma terminal organelle. The terminal organelle is involved in both cytadherence and gliding motility.
Probab=97.66 E-value=0.00017 Score=78.14 Aligned_cols=70 Identities=50% Similarity=0.816 Sum_probs=65.4
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHhhhhhhhhhhhcccccCCC
Q 012891 82 RDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGS 152 (454)
Q Consensus 82 ~~~Y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yd~~~~~g~ 152 (454)
.|||+||||+++|+.++||+|||+||++||||++++ +.+.++|++|++||++|+||.+|+.||.++..+.
T Consensus 2 ~DYYeVLGVs~dAS~eEIKKAYRKLAKKyHPDKn~~-~eAeekFqeINEAYEVLSDP~KRa~YD~fG~aG~ 71 (871)
T TIGR03835 2 RDYYEVLGIDRDADEQEIKKAFRKLAKKYHPDRNKA-PDAASIFAEINEANDVLSNPKKRANYDKYGHDGV 71 (871)
T ss_pred CChhHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC-hhHHHHHHHHHHHHHHhCCHHHHHHHhhhccccc
Confidence 599999999999999999999999999999999975 7788899999999999999999999999876553
No 106
>KOG3192 consensus Mitochondrial J-type chaperone [Posttranslational modification, protein turnover, chaperones]
Probab=97.56 E-value=8.4e-05 Score=65.35 Aligned_cols=69 Identities=26% Similarity=0.456 Sum_probs=55.0
Q ss_pred CCCCCcccccCCCC--CCCHHHHHHHHHHHHHHhCCCCCCCCh-----hHHHHHHHHHHHHHhhhhhhhhhhhccc
Q 012891 79 SSKRDPYELLGVPE--NASQDEIKKAFHMLAKQYHPDANKNNP-----SAKRKFQEIRDAYETLRDSEKRAQYDRR 147 (454)
Q Consensus 79 ~~~~~~Y~iLgv~~--~a~~~eIk~ayr~la~~~HPD~~~~~~-----~a~~~f~~i~~Ay~vL~d~~~r~~yd~~ 147 (454)
....+||.++|... ..++.-++.-|--..+++|||+..... .|.+...++|+||.+|.||.+|+.|=.-
T Consensus 5 ~~~~~ff~~Fg~e~~~~~~p~~l~~~~~~~skkL~~d~~~~~~~~~~d~a~eqSa~lnkAY~TLk~pL~RA~Yilk 80 (168)
T KOG3192|consen 5 GSPSRFFDIFGMELSFKIDPDKLKEKYTDISKKLHPDRPGLSFAGDTDQASEQSAELNKAYDTLKDPLARARYLLK 80 (168)
T ss_pred chHHHHHHHhccccCCCCCcchhhHHHHHHHHhhCcccccccccccchhHHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 34578999997654 556666777899999999999854321 3677899999999999999999999764
No 107
>COG1107 Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair]
Probab=97.46 E-value=8.3e-05 Score=77.81 Aligned_cols=45 Identities=13% Similarity=0.225 Sum_probs=22.1
Q ss_pred CCCCCcEEEEcCCCcCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHHHHH
Q 012891 380 GVQPGQLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPTALNERQRAILEEFAEE 432 (454)
Q Consensus 380 ~~~~g~~~~l~g~Gmp~~~~~~~rGdL~v~~~V~~P~~ls~~q~~~l~~~~~~ 432 (454)
.+..|+++.|-|+=-+. .|+|-|++. ==+.|+..+....++-...
T Consensus 258 ~IevGdiV~ViG~V~~r------~g~lQiE~~--~me~L~G~ea~eVr~rid~ 302 (715)
T COG1107 258 EIEVGDIVEVIGEVTRR------DGRLQIEIE--AMEKLTGDEAAEVRKRIDE 302 (715)
T ss_pred CCCCCceEEEEEEEeec------CCcEEEeeh--hhHHhhCchHHHHHHHHHH
Confidence 35566666666653221 366655542 1245665554444444333
No 108
>PF00684 DnaJ_CXXCXGXG: DnaJ central domain; InterPro: IPR001305 The hsp70 chaperone machine performs many diverse roles in the cell, including folding of nascent proteins, translocation of polypeptides across organelle membranes, coordinating responses to stress, and targeting selected proteins for degradation. DnaJ is a member of the hsp40 family of molecular chaperones, which is also called the J-protein family, the members of which regulate the activity of hsp70s. DnaJ (hsp40) binds to DnaK (hsp70) and stimulates its ATPase activity, generating the ADP-bound state of DnaK, which interacts stably with the polypeptide substrate []. Besides stimulating the ATPase activity of DnaK through its J-domain, DnaJ also associates with unfolded polypeptide chains and prevents their aggregation []. DnaJ consists of an N-terminal conserved domain (called 'J' domain) of about 70 amino acid residues, a glycine and phenylalanine-rich domain ('G/F' domain), a central cysteine rich domain (CR-type zinc finger) containing four repeats of a CXXCXGXG motif which can coordinate two zinc atom and a C-terminal domain (CTD) []. This entry represents the central cysteine-rich (CR) domain of DnaJ proteins. This central cysteine rich domain (CR-type zinc finger) has an overall V-shaped extended beta-hairpin topology and contains four repeats of the motif CXXCXGXG where X is any amino acid. The isolated cysteine rich domain folds in zinc dependent fashion. Each set of two repeats binds one unit of zinc. Although this domain has been implicated in substrate binding, no evidence of specific interaction between the isolated DnaJ cysteine rich domain and various hydrophobic peptides has been found [].; GO: 0031072 heat shock protein binding, 0051082 unfolded protein binding; PDB: 1NLT_A 2CTT_A 1EXK_A.
Probab=97.34 E-value=0.00011 Score=56.38 Aligned_cols=44 Identities=32% Similarity=0.778 Sum_probs=31.8
Q ss_pred eeecccCCCCCCccCCC---------ccccCCCccccceEEeCCccccCCCCCCce
Q 012891 228 AFVPCDSCHGRGFPADA---------KTKICSTCRGIGRVTIPPFTSTCSTCKGLG 274 (454)
Q Consensus 228 ~~~~C~~C~G~G~~~~~---------~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G 274 (454)
....|+.|+|+|..... ...+|+.|+|+|.++ ....|+.|+|.|
T Consensus 14 ~~~~C~~C~G~G~~~~~~~~~~~~~~~~~~C~~C~G~G~~i---~~~~C~~C~G~g 66 (66)
T PF00684_consen 14 KPKTCPQCNGSGQVTRRQQTPGGVFQMQQTCPKCGGTGKII---EKDPCKTCKGSG 66 (66)
T ss_dssp T-EE-TTSSSSSEEEEEEESSSTTEEEEEE-TTTSSSSEE----TSSB-SSSTTSS
T ss_pred CCcCCcCCCCeeEEEEEEeCCCeEEEEEEECCCCcceeeEE---CCCCCCCCCCcC
Confidence 34689999999987432 357999999999983 278999999986
No 109
>COG1107 Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair]
Probab=96.56 E-value=0.0018 Score=68.09 Aligned_cols=24 Identities=38% Similarity=1.031 Sum_probs=11.5
Q ss_pred ccCCCCCCceEEe-eeecccccCCc
Q 012891 265 STCSTCKGLGRII-KDHCMTCKGSG 288 (454)
Q Consensus 265 ~~C~~C~G~G~~~-~~~C~~C~g~G 288 (454)
.+|+.|.|+|.+. -..|..|.|.|
T Consensus 54 ~pc~~c~gkG~V~v~~~c~~c~G~g 78 (715)
T COG1107 54 IPCPKCRGKGTVTVYDTCPECGGTG 78 (715)
T ss_pred CCCCeeccceeEEEEeecccCCCce
Confidence 3455555555442 34555555544
No 110
>PLN03165 chaperone protein dnaJ-related; Provisional
Probab=96.50 E-value=0.0019 Score=54.54 Aligned_cols=41 Identities=34% Similarity=0.764 Sum_probs=32.2
Q ss_pred cccCCCCCCccCC------CccccCCCccccceEEeCCccccCCCCCCceEEee
Q 012891 231 PCDSCHGRGFPAD------AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIK 278 (454)
Q Consensus 231 ~C~~C~G~G~~~~------~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~ 278 (454)
.|+.|+|+|.... .....|+.|+|.|+. .|..|.|+|.+.+
T Consensus 54 ~C~~C~G~G~v~~~~~g~~q~~~~C~~C~G~Gk~-------~C~~C~G~G~~~~ 100 (111)
T PLN03165 54 VCRFCVGSGNVTVELGGGEKEVSKCINCDGAGSL-------TCTTCQGSGIQPR 100 (111)
T ss_pred CCCCCcCcCeEEEEeCCcEEEEEECCCCCCccee-------eCCCCCCCEEEee
Confidence 7999999987532 125689999999974 3999999998764
No 111
>COG1076 DjlA DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones]
Probab=96.37 E-value=0.0029 Score=58.11 Aligned_cols=69 Identities=32% Similarity=0.526 Sum_probs=53.7
Q ss_pred CcccccCCCCCC--CHHHHHHHHHHHHHHhCCCCCCCChh-----HHHHHHHHHHHHHhhhhhhhhhhhcccccCC
Q 012891 83 DPYELLGVPENA--SQDEIKKAFHMLAKQYHPDANKNNPS-----AKRKFQEIRDAYETLRDSEKRAQYDRRRSRG 151 (454)
Q Consensus 83 ~~Y~iLgv~~~a--~~~eIk~ayr~la~~~HPD~~~~~~~-----a~~~f~~i~~Ay~vL~d~~~r~~yd~~~~~g 151 (454)
+|+..+|..+.+ ..+.++..|+.+++.||||+....+. +.+.+..++.||.+|.||.+|+.|=..-..|
T Consensus 2 ~~~~~~~~~~~f~~~~~~l~~~~~~~~~~~~~dr~~~~~~~~~~~~l~~~~~~~~a~~tLk~~l~ra~~~lal~~g 77 (174)
T COG1076 2 DGFVLFGLPRAFQIDLDALKLQYRELQRAYHPDRFGKASEAEQRKALQQSAEVNPAYQTLKDPLLRAEYLLALADG 77 (174)
T ss_pred CcccccccHHHHHHHHhHhhhhHHHHHHhhCcccccccchHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHhccc
Confidence 455666666644 44568999999999999999875543 3457889999999999999999998764433
No 112
>KOG2813 consensus Predicted molecular chaperone, contains DnaJ domain [Posttranslational modification, protein turnover, chaperones]
Probab=96.19 E-value=0.0046 Score=60.51 Aligned_cols=31 Identities=39% Similarity=0.867 Sum_probs=18.3
Q ss_pred cCCCCCCceEEeeeecccccCCceeeceEEEEEE
Q 012891 266 TCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVT 299 (454)
Q Consensus 266 ~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~~~V~ 299 (454)
.|++|.|.|. .+|.+|.|.|-+..-..+.|.
T Consensus 247 ~C~tC~grG~---k~C~TC~gtgsll~~t~~vV~ 277 (406)
T KOG2813|consen 247 ECHTCKGRGK---KPCTTCSGTGSLLNYTRIVVY 277 (406)
T ss_pred cCCcccCCCC---cccccccCccceeeeEEEEEE
Confidence 4666666654 478888887765444444433
No 113
>COG1076 DjlA DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones]
Probab=96.12 E-value=0.003 Score=57.97 Aligned_cols=54 Identities=43% Similarity=0.632 Sum_probs=46.5
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCC--Ch-----hHHHHHHHHHHHHHhh
Q 012891 82 RDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKN--NP-----SAKRKFQEIRDAYETL 135 (454)
Q Consensus 82 ~~~Y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~--~~-----~a~~~f~~i~~Ay~vL 135 (454)
.+.|.+|++...++..+|+++|+++...+|||+-.. .+ .+.+++++|++||+.+
T Consensus 113 ~~~l~~l~~~~~~~~~~i~~~~r~l~~e~~~d~a~~~~~~~e~~~~~~~~~~~i~~a~~~~ 173 (174)
T COG1076 113 EDALKVLGVEIKADQDAIKKAYRKLLSEQHPDKAAAKGLKLEFIEKLKEKLQEIQEAYEDI 173 (174)
T ss_pred hhHHHHhcCchhhhHHHHHHHHHHHHHhcCHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhc
Confidence 689999999999999999999999999999998532 22 3778899999999753
No 114
>KOG0431 consensus Auxilin-like protein and related proteins containing DnaJ domain [General function prediction only]
Probab=95.45 E-value=0.015 Score=61.11 Aligned_cols=47 Identities=19% Similarity=0.399 Sum_probs=36.1
Q ss_pred CCCCCCCHHHHHHHHHHHHHHhCCCCCCCCh-------hHHHHHHHHHHHHHhh
Q 012891 89 GVPENASQDEIKKAFHMLAKQYHPDANKNNP-------SAKRKFQEIRDAYETL 135 (454)
Q Consensus 89 gv~~~a~~~eIk~ayr~la~~~HPD~~~~~~-------~a~~~f~~i~~Ay~vL 135 (454)
.+..=.+.++||||||+..+..||||.++.+ -+++.|..+++||+..
T Consensus 395 sltDLVtp~~VKKaYrKA~L~VHPDKlqq~gas~~qK~Iaekvfd~l~eawn~f 448 (453)
T KOG0431|consen 395 SLTDLVTPAQVKKAYRKAVLCVHPDKLQQKGASLEQKYIAEKVFDALSEAWNKF 448 (453)
T ss_pred chhhccCHHHHHHHHHhhhheeCcccccCCcccHHHHHHHHHHHHHHHHHHHhh
Confidence 4444568999999999999999999987653 1566677777777643
No 115
>TIGR02642 phage_xxxx uncharacterized phage protein. This uncharacterized protein is found in prophage regions of Shewanella oneidensis MR-1, Vibrio vulnificus YJ016, Yersinia pseudotuberculosis IP 32953, and Aeromonas hydrophila ATCC7966. It appears to have regions of sequence similarity to phage lambda antitermination protein Q.
Probab=95.23 E-value=0.016 Score=53.48 Aligned_cols=28 Identities=39% Similarity=0.910 Sum_probs=13.5
Q ss_pred cCCCccccceEEeCCccccCCCCCCceEEe
Q 012891 248 ICSTCRGIGRVTIPPFTSTCSTCKGLGRII 277 (454)
Q Consensus 248 ~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~ 277 (454)
+|+.|+|+|.+... ..+|+.|+|+|++.
T Consensus 101 ~C~~C~G~G~~i~~--~~~C~~C~G~G~v~ 128 (186)
T TIGR02642 101 KCPRCRGTGLIQRR--QRECDTCAGTGRFR 128 (186)
T ss_pred cCCCCCCeeEEecC--CCCCCCCCCccEEe
Confidence 45555555544211 13466666666553
No 116
>KOG2813 consensus Predicted molecular chaperone, contains DnaJ domain [Posttranslational modification, protein turnover, chaperones]
Probab=94.35 E-value=0.025 Score=55.53 Aligned_cols=57 Identities=30% Similarity=0.676 Sum_probs=34.9
Q ss_pred ecccCCCCCCccC--CCccccCCCccccceEEeCCccccCCCCCCceEEeeeecccccCCcee
Q 012891 230 VPCDSCHGRGFPA--DAKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTCKGSGVV 290 (454)
Q Consensus 230 ~~C~~C~G~G~~~--~~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~C~~C~g~G~~ 290 (454)
..|+.|+|.|... ...+..|+.|-|.-.-. ......|..|+|+|. ..|.+|.|.|..
T Consensus 199 ~vc~gc~g~G~~~y~~~~~m~c~sc~G~~~~k-~gt~~~C~~C~G~G~---~~C~tC~grG~k 257 (406)
T KOG2813|consen 199 MVCHGCSGSGSNSYGIGTPMHCMSCTGVPPPK-IGTHDLCYMCHGRGI---KECHTCKGRGKK 257 (406)
T ss_pred eeccCcCCCCccccccCcceecccccCCCCCC-CCccchhhhccCCCc---ccCCcccCCCCc
Confidence 4566666666422 12355666666510000 012567999999996 479999999865
No 117
>PF03656 Pam16: Pam16; InterPro: IPR005341 The Pam16 protein is the fifth essential subunit of the pre-sequence translocase-associated protein import motor (PAM) []. In Saccharomyces cerevisiae (Baker's yeast), Pam16 is required for preprotein translocation into the matrix, but not for protein insertion into the inner membrane [].; PDB: 2GUZ_J.
Probab=92.42 E-value=0.31 Score=42.23 Aligned_cols=59 Identities=24% Similarity=0.277 Sum_probs=41.0
Q ss_pred CCCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHhhhhhhhh
Q 012891 79 SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKR 141 (454)
Q Consensus 79 ~~~~~~Y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r 141 (454)
+.-..-..||||++.++.++|.+.|.+|-...+|++.+. . =.=.+|..|.|.|....+.
T Consensus 55 Mtl~EA~~ILnv~~~~~~eeI~k~y~~Lf~~Nd~~kGGS-f---YLQSKV~rAKErl~~El~~ 113 (127)
T PF03656_consen 55 MTLDEARQILNVKEELSREEIQKRYKHLFKANDPSKGGS-F---YLQSKVFRAKERLEQELKE 113 (127)
T ss_dssp --HHHHHHHHT--G--SHHHHHHHHHHHHHHT-CCCTS--H---HHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHcCCCCccCHHHHHHHHHHHHhccCCCcCCC-H---HHHHHHHHHHHHHHHHHHH
Confidence 344567899999999999999999999999999998863 1 1123788899998876643
No 118
>KOG0715 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=86.20 E-value=0.81 Score=45.48 Aligned_cols=49 Identities=31% Similarity=0.668 Sum_probs=36.0
Q ss_pred eeceeecccCCCCCCccCC-----CccccCCCccccceEEeCCccccCCCCCCceEEe
Q 012891 225 SFDAFVPCDSCHGRGFPAD-----AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRII 277 (454)
Q Consensus 225 ~~~~~~~C~~C~G~G~~~~-----~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~ 277 (454)
.......|..|.|+|.... -...+|..|+|.|.+. ...|..|.|.|.+.
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~c~~~~~~~----~~~c~~~~g~~~v~ 230 (288)
T KOG0715|consen 177 EGAKRESCKTCSGRGLVSNPKEDPFILYTCSYCLGRGLVL----RDNCQACSGAGQVR 230 (288)
T ss_pred cccccccchhhhCcccccccccCCcceeecccccccceec----cchHHHhhcchhhh
Confidence 3456789999999993221 1123799999999984 34499999999654
No 119
>KOG2824 consensus Glutaredoxin-related protein [Posttranslational modification, protein turnover, chaperones]
Probab=85.54 E-value=0.81 Score=44.51 Aligned_cols=36 Identities=31% Similarity=0.915 Sum_probs=18.1
Q ss_pred cCCCccccceEEeCCccccCCCCCCceEEee--------eecccccCCcee
Q 012891 248 ICSTCRGIGRVTIPPFTSTCSTCKGLGRIIK--------DHCMTCKGSGVV 290 (454)
Q Consensus 248 ~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~--------~~C~~C~g~G~~ 290 (454)
.|..|+|.+.+ +|..|+|+-++.. ..|..|+-.|.+
T Consensus 231 ~C~~CGg~rFl-------pC~~C~GS~kv~~~~~~~~~~~rC~~CNENGLv 274 (281)
T KOG2824|consen 231 VCESCGGARFL-------PCSNCHGSCKVHEEEEDDGGVLRCLECNENGLV 274 (281)
T ss_pred cCCCcCCcceE-------ecCCCCCceeeeeeccCCCcEEECcccCCCCce
Confidence 45555555544 3555555555443 355555555543
No 120
>cd03031 GRX_GRX_like Glutaredoxin (GRX) family, GRX-like domain containing protein subfamily; composed of uncharacterized eukaryotic proteins containing a GRX-like domain having only one conserved cysteine, aligning to the C-terminal cysteine of the CXXC motif of GRXs. This subfamily is predominantly composed of plant proteins. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins via a redox active CXXC motif using a similar dithiol mechanism employed by TRXs. GRX has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. Proteins containing only the C-terminal cysteine are generally redox inactive.
Probab=80.78 E-value=1.7 Score=38.83 Aligned_cols=23 Identities=39% Similarity=0.892 Sum_probs=12.8
Q ss_pred ecccCCCCCCccCCCccccCCCccccceE
Q 012891 230 VPCDSCHGRGFPADAKTKICSTCRGIGRV 258 (454)
Q Consensus 230 ~~C~~C~G~G~~~~~~~~~C~~C~G~G~~ 258 (454)
..|..|.|.++ ..|..|+|+=++
T Consensus 100 ~~C~~Cgg~rf------v~C~~C~Gs~k~ 122 (147)
T cd03031 100 GVCEGCGGARF------VPCSECNGSCKV 122 (147)
T ss_pred CCCCCCCCcCe------EECCCCCCcceE
Confidence 34666666554 356666655544
No 121
>PF14687 DUF4460: Domain of unknown function (DUF4460)
Probab=80.50 E-value=3.7 Score=34.84 Aligned_cols=47 Identities=17% Similarity=0.345 Sum_probs=35.2
Q ss_pred CCCCHHHHHHHHHHHHHHhCCCCCCCChhH----HHHHHHHHHHHHhhhhh
Q 012891 92 ENASQDEIKKAFHMLAKQYHPDANKNNPSA----KRKFQEIRDAYETLRDS 138 (454)
Q Consensus 92 ~~a~~~eIk~ayr~la~~~HPD~~~~~~~a----~~~f~~i~~Ay~vL~d~ 138 (454)
+..+..+++.|.|.+-++.|||.....|++ ++-++.++.-.+.|..+
T Consensus 4 r~~~~~~l~~aLr~Fy~~VHPDlF~~~P~~k~~Ne~SLk~Ln~~Ld~l~~~ 54 (112)
T PF14687_consen 4 RNLSSPDLRSALRPFYFAVHPDLFGQHPEEKQVNEESLKLLNSYLDSLKKR 54 (112)
T ss_pred hhhhhHHHHHHHHHHHHHhCCcccccChHHHHhhHHHHHHHHHHHHHHhcc
Confidence 355778899999999999999998877753 34566666666666543
No 122
>PF11833 DUF3353: Protein of unknown function (DUF3353); InterPro: IPR021788 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 205 to 258 amino acids in length.
Probab=80.21 E-value=4.2 Score=37.99 Aligned_cols=39 Identities=31% Similarity=0.434 Sum_probs=30.3
Q ss_pred CCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHhhhh
Q 012891 91 PENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRD 137 (454)
Q Consensus 91 ~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d 137 (454)
+++||.+||.+|+.++..+|- +| ++.-.+|-.|||.+.=
T Consensus 1 S~~ASfeEIq~Arn~ll~~y~-----gd---~~~~~~IEaAYD~ILM 39 (194)
T PF11833_consen 1 SEDASFEEIQAARNRLLAQYA-----GD---EKSREAIEAAYDAILM 39 (194)
T ss_pred CCCCCHHHHHHHHHHHHHHhc-----CC---HHHHHHHHHHHHHHHH
Confidence 578999999999999999983 23 3445579999976553
No 123
>KOG0724 consensus Zuotin and related molecular chaperones (DnaJ superfamily), contains DNA-binding domains [Posttranslational modification, protein turnover, chaperones]
Probab=78.96 E-value=1.9 Score=43.69 Aligned_cols=54 Identities=30% Similarity=0.442 Sum_probs=43.4
Q ss_pred CCHHHHHHHHHHHHHHhCCCCCCC----ChhHHHHHHHHHHHHHhhhhhhhhhhhccc
Q 012891 94 ASQDEIKKAFHMLAKQYHPDANKN----NPSAKRKFQEIRDAYETLRDSEKRAQYDRR 147 (454)
Q Consensus 94 a~~~eIk~ayr~la~~~HPD~~~~----~~~a~~~f~~i~~Ay~vL~d~~~r~~yd~~ 147 (454)
++..+|..+|+..++..||++... .-..++.|++|.+||++|.+..+|...|..
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~i~ka~~i~~~~~~~~t~~~~ 61 (335)
T KOG0724|consen 4 ASEDELRLAYREMALKSHPEKKSFYEKLSLWTEEEFKKIEKALAILDDDEPRRTPDSW 61 (335)
T ss_pred ccHHHHHHHHHHHhhhcCcHHHHHHHHhhhhHHHHHHHHHHHHHHHhccccccchhhh
Confidence 577899999999999999998741 123567899999999999996666666654
No 124
>KOG2824 consensus Glutaredoxin-related protein [Posttranslational modification, protein turnover, chaperones]
Probab=77.31 E-value=2.4 Score=41.27 Aligned_cols=47 Identities=32% Similarity=0.694 Sum_probs=36.2
Q ss_pred ecccCCCCCCccCCCccccCCCccccceEEeC----CccccCCCCCCceEEeeeeccccc
Q 012891 230 VPCDSCHGRGFPADAKTKICSTCRGIGRVTIP----PFTSTCSTCKGLGRIIKDHCMTCK 285 (454)
Q Consensus 230 ~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~----~~~~~C~~C~G~G~~~~~~C~~C~ 285 (454)
-.|..|.|.++ ..|..|+|.=++... ..-.+|..|+-.|-+ .|+.|.
T Consensus 230 ~~C~~CGg~rF------lpC~~C~GS~kv~~~~~~~~~~~rC~~CNENGLv---rCp~Cs 280 (281)
T KOG2824|consen 230 GVCESCGGARF------LPCSNCHGSCKVHEEEEDDGGVLRCLECNENGLV---RCPVCS 280 (281)
T ss_pred CcCCCcCCcce------EecCCCCCceeeeeeccCCCcEEECcccCCCCce---eCCccC
Confidence 57999998876 579999999887651 125689999999976 577774
No 125
>PF13446 RPT: A repeated domain in UCH-protein
Probab=76.63 E-value=4.4 Score=30.26 Aligned_cols=27 Identities=33% Similarity=0.608 Sum_probs=24.5
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHH
Q 012891 82 RDPYELLGVPENASQDEIKKAFHMLAK 108 (454)
Q Consensus 82 ~~~Y~iLgv~~~a~~~eIk~ayr~la~ 108 (454)
.+.|+.|||+++++.+.|-.+|+....
T Consensus 5 ~~Ay~~Lgi~~~~~Dd~Ii~~f~~~~~ 31 (62)
T PF13446_consen 5 EEAYEILGIDEDTDDDFIISAFQSKVN 31 (62)
T ss_pred HHHHHHhCcCCCCCHHHHHHHHHHHHH
Confidence 467999999999999999999999876
No 126
>TIGR00630 uvra excinuclease ABC, A subunit. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=73.75 E-value=2.1 Score=49.23 Aligned_cols=23 Identities=22% Similarity=0.122 Sum_probs=16.4
Q ss_pred EEECCC-CCCHHHHHHHHHHHHHh
Q 012891 411 RVNFPT-ALNERQRAILEEFAEEE 433 (454)
Q Consensus 411 ~V~~P~-~ls~~q~~~l~~~~~~~ 433 (454)
-++=|. .|++..++.|.+++...
T Consensus 854 ILDEPtsgLD~~~~~~L~~~L~~l 877 (924)
T TIGR00630 854 ILDEPTTGLHFDDIKKLLEVLQRL 877 (924)
T ss_pred EEECCCCCCCHHHHHHHHHHHHHH
Confidence 366675 48888888877777654
No 127
>COG1198 PriA Primosomal protein N' (replication factor Y) - superfamily II helicase [DNA replication, recombination, and repair]
Probab=64.54 E-value=5.2 Score=44.73 Aligned_cols=51 Identities=18% Similarity=0.389 Sum_probs=37.2
Q ss_pred eeecccCCCCCCccCCCccccCCCccccceEEeCCccccCCCCCCceEEeeeecccccCC
Q 012891 228 AFVPCDSCHGRGFPADAKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTCKGS 287 (454)
Q Consensus 228 ~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~C~~C~g~ 287 (454)
....|..|.-. ..||.|...=......-...|..|+-. ..+...|+.|.+.
T Consensus 434 ~~l~C~~Cg~v--------~~Cp~Cd~~lt~H~~~~~L~CH~Cg~~-~~~p~~Cp~Cgs~ 484 (730)
T COG1198 434 PLLLCRDCGYI--------AECPNCDSPLTLHKATGQLRCHYCGYQ-EPIPQSCPECGSE 484 (730)
T ss_pred ceeecccCCCc--------ccCCCCCcceEEecCCCeeEeCCCCCC-CCCCCCCCCCCCC
Confidence 35789999763 689999876444333446679999877 5566789999976
No 128
>PRK14714 DNA polymerase II large subunit; Provisional
Probab=64.22 E-value=4.8 Score=47.02 Aligned_cols=54 Identities=17% Similarity=0.321 Sum_probs=34.8
Q ss_pred eecccCCCCCCccCCCccccCCCccccceEEeCCccccCCCCCCce---EEeeeecccccCCceeec
Q 012891 229 FVPCDSCHGRGFPADAKTKICSTCRGIGRVTIPPFTSTCSTCKGLG---RIIKDHCMTCKGSGVVDG 292 (454)
Q Consensus 229 ~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G---~~~~~~C~~C~g~G~~~~ 292 (454)
...|+.|...... ..|+.|+..-.. ...|+.|+..= ......|+.|...-....
T Consensus 667 ~rkCPkCG~~t~~-----~fCP~CGs~te~-----vy~CPsCGaev~~des~a~~CP~CGtplv~~~ 723 (1337)
T PRK14714 667 RRRCPSCGTETYE-----NRCPDCGTHTEP-----VYVCPDCGAEVPPDESGRVECPRCDVELTPYQ 723 (1337)
T ss_pred EEECCCCCCcccc-----ccCcccCCcCCC-----ceeCccCCCccCCCccccccCCCCCCcccccc
Confidence 5689999886432 389999876321 23799998741 011347999997754433
No 129
>PRK00349 uvrA excinuclease ABC subunit A; Reviewed
Probab=62.53 E-value=4.5 Score=46.78 Aligned_cols=15 Identities=27% Similarity=0.457 Sum_probs=8.5
Q ss_pred eecccccCCceeece
Q 012891 279 DHCMTCKGSGVVDGV 293 (454)
Q Consensus 279 ~~C~~C~g~G~~~~~ 293 (454)
..|..|+|..+..+.
T Consensus 762 ~~C~~C~G~R~~~e~ 776 (943)
T PRK00349 762 VPCDVCKGKRYNRET 776 (943)
T ss_pred ccCccccCccccccc
Confidence 356666666555443
No 130
>PRK04023 DNA polymerase II large subunit; Validated
Probab=62.12 E-value=5.2 Score=45.65 Aligned_cols=65 Identities=23% Similarity=0.358 Sum_probs=40.0
Q ss_pred Eeecccc-CcceeeeeceeecccCCCCCCccCCCccccCCCccccceEEeCCccccCCCCCCceEEeeeecccccCCce
Q 012891 212 SFAEAAK-GCTKHVSFDAFVPCDSCHGRGFPADAKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTCKGSGV 289 (454)
Q Consensus 212 tlee~~~-G~~k~v~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~C~~C~g~G~ 289 (454)
++.+|+. +...++.+. ...|+.|.-.+ ....||.|+..-. ....|+.|.-... ...|+.|...-.
T Consensus 609 ~i~~A~~~~g~~eVEVg-~RfCpsCG~~t-----~~frCP~CG~~Te-----~i~fCP~CG~~~~--~y~CPKCG~El~ 674 (1121)
T PRK04023 609 DINKAAKYKGTIEVEIG-RRKCPSCGKET-----FYRRCPFCGTHTE-----PVYRCPRCGIEVE--EDECEKCGREPT 674 (1121)
T ss_pred cHHHHHhcCCceeeccc-CccCCCCCCcC-----CcccCCCCCCCCC-----cceeCccccCcCC--CCcCCCCCCCCC
Confidence 3556665 444444443 35799998764 3468999987621 1246999944332 357999987643
No 131
>cd03031 GRX_GRX_like Glutaredoxin (GRX) family, GRX-like domain containing protein subfamily; composed of uncharacterized eukaryotic proteins containing a GRX-like domain having only one conserved cysteine, aligning to the C-terminal cysteine of the CXXC motif of GRXs. This subfamily is predominantly composed of plant proteins. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins via a redox active CXXC motif using a similar dithiol mechanism employed by TRXs. GRX has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. Proteins containing only the C-terminal cysteine are generally redox inactive.
Probab=61.89 E-value=7.9 Score=34.48 Aligned_cols=38 Identities=32% Similarity=0.804 Sum_probs=29.2
Q ss_pred cccCCCccccceEEeCCccccCCCCCCceEEee---------eecccccCCcee
Q 012891 246 TKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIK---------DHCMTCKGSGVV 290 (454)
Q Consensus 246 ~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~---------~~C~~C~g~G~~ 290 (454)
...|..|.|.+.+ +|..|+|+-++.. ..|+.|+-.|.+
T Consensus 99 ~~~C~~Cgg~rfv-------~C~~C~Gs~k~~~~~~~~~~~~~rC~~Cnengl~ 145 (147)
T cd03031 99 GGVCEGCGGARFV-------PCSECNGSCKVFAENATAAGGFLRCPECNENGLV 145 (147)
T ss_pred CCCCCCCCCcCeE-------ECCCCCCcceEEeccCcccccEEECCCCCccccc
Confidence 3469999998887 6999999877642 378888877754
No 132
>smart00709 Zpr1 Duplicated domain in the epidermal growth factor- and elongation factor-1alpha-binding protein Zpr1. Also present in archaeal proteins.
Probab=59.93 E-value=14 Score=33.43 Aligned_cols=20 Identities=30% Similarity=0.393 Sum_probs=12.6
Q ss_pred EEEEEecCccCCCCEEEECC
Q 012891 295 EVKVTIPAGVDSGDTIRVPE 314 (454)
Q Consensus 295 ~~~V~Ip~G~~~G~~i~~~g 314 (454)
.+.+.||||...|..-.++|
T Consensus 81 El~~ei~pg~~~g~itTVEG 100 (160)
T smart00709 81 ELDLEIPPGPLGGFITTVEG 100 (160)
T ss_pred eeeEEecCCCCCcEEEehHH
Confidence 55666777766666666654
No 133
>PRK00635 excinuclease ABC subunit A; Provisional
Probab=58.77 E-value=5.7 Score=48.74 Aligned_cols=28 Identities=11% Similarity=0.154 Sum_probs=18.5
Q ss_pred CcEEEEEEEECCCC-CCHHHHHHHHHHHHHhc
Q 012891 404 GDQYVRFRVNFPTA-LNERQRAILEEFAEEEI 434 (454)
Q Consensus 404 GdL~v~~~V~~P~~-ls~~q~~~l~~~~~~~~ 434 (454)
+.||| ++=|.. |.+...+.|-+++....
T Consensus 1721 ~~lyi---lDEPt~GLh~~d~~~Ll~~l~~L~ 1749 (1809)
T PRK00635 1721 PTLFL---LDEIATSLDNQQKSALLVQLRTLV 1749 (1809)
T ss_pred CcEEE---EcCCCCCCCHHHHHHHHHHHHHHH
Confidence 35554 677764 88888777777765543
No 134
>TIGR00630 uvra excinuclease ABC, A subunit. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=57.95 E-value=4.7 Score=46.48 Aligned_cols=29 Identities=31% Similarity=0.621 Sum_probs=20.4
Q ss_pred ccCCCCCCceEEe---------eeecccccCCceeece
Q 012891 265 STCSTCKGLGRII---------KDHCMTCKGSGVVDGV 293 (454)
Q Consensus 265 ~~C~~C~G~G~~~---------~~~C~~C~g~G~~~~~ 293 (454)
-.|+.|.|.|.+. ...|..|+|..+..+.
T Consensus 737 G~C~~C~G~G~~~~~~~f~~~~~~~C~~C~G~R~~~e~ 774 (924)
T TIGR00630 737 GRCEACQGDGVIKIEMHFLPDVYVPCEVCKGKRYNRET 774 (924)
T ss_pred CCCCCCccceEEEEEccCCCCcccCCCCcCCceeChHH
Confidence 4588888888764 3578888887766553
No 135
>TIGR00310 ZPR1_znf ZPR1 zinc finger domain.
Probab=57.23 E-value=21 Score=33.27 Aligned_cols=20 Identities=20% Similarity=0.320 Sum_probs=13.3
Q ss_pred EEEEEecCc-cCCCCEEEECC
Q 012891 295 EVKVTIPAG-VDSGDTIRVPE 314 (454)
Q Consensus 295 ~~~V~Ip~G-~~~G~~i~~~g 314 (454)
.+.+.|||| +..|..-.++|
T Consensus 80 El~lei~pg~~~~G~iTTVEG 100 (192)
T TIGR00310 80 ELGLDIEPGPTSGGFITNLEG 100 (192)
T ss_pred ceEEEECCCccCCceEEeeHh
Confidence 556777777 56777666654
No 136
>PF09538 FYDLN_acid: Protein of unknown function (FYDLN_acid); InterPro: IPR012644 Members of this family are bacterial proteins with a conserved motif [KR]FYDLN, sometimes flanked by a pair of CXXC motifs, followed by a long region of low complexity sequence in which roughly half the residues are Asp and Glu, including multiple runs of five or more acidic residues. The function of members of this family is unknown.
Probab=50.64 E-value=9.5 Score=32.13 Aligned_cols=27 Identities=19% Similarity=0.565 Sum_probs=18.6
Q ss_pred ceeecccCCCCCCccCCCccccCCCcc
Q 012891 227 DAFVPCDSCHGRGFPADAKTKICSTCR 253 (454)
Q Consensus 227 ~~~~~C~~C~G~G~~~~~~~~~C~~C~ 253 (454)
..++.|+.|.-.-+--+..+.+||.|+
T Consensus 7 GtKR~Cp~CG~kFYDLnk~PivCP~CG 33 (108)
T PF09538_consen 7 GTKRTCPSCGAKFYDLNKDPIVCPKCG 33 (108)
T ss_pred CCcccCCCCcchhccCCCCCccCCCCC
Confidence 345678888777666666677777774
No 137
>PRK14873 primosome assembly protein PriA; Provisional
Probab=50.43 E-value=13 Score=41.37 Aligned_cols=49 Identities=20% Similarity=0.449 Sum_probs=34.7
Q ss_pred eecccCCCCCCccCCCccccCCCccccceEEeCCccccCCCCCCceEEeeeecccccCC
Q 012891 229 FVPCDSCHGRGFPADAKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTCKGS 287 (454)
Q Consensus 229 ~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~C~~C~g~ 287 (454)
...|..|.- ...|+.|.+.=......-.-.|..|+-.- ....|+.|.+.
T Consensus 383 ~l~C~~Cg~--------~~~C~~C~~~L~~h~~~~~l~Ch~CG~~~--~p~~Cp~Cgs~ 431 (665)
T PRK14873 383 SLACARCRT--------PARCRHCTGPLGLPSAGGTPRCRWCGRAA--PDWRCPRCGSD 431 (665)
T ss_pred eeEhhhCcC--------eeECCCCCCceeEecCCCeeECCCCcCCC--cCccCCCCcCC
Confidence 468888875 36899998765443323345799998753 47799999876
No 138
>PF07709 SRR: Seven Residue Repeat; InterPro: IPR011714 This repeat is found in some Plasmodium and Theileria proteins.
Probab=50.41 E-value=9 Score=19.93 Aligned_cols=13 Identities=46% Similarity=0.991 Sum_probs=10.3
Q ss_pred HHHHHHHHHHhhh
Q 012891 124 KFQEIRDAYETLR 136 (454)
Q Consensus 124 ~f~~i~~Ay~vL~ 136 (454)
.|..|..||+.|+
T Consensus 2 ~~~~V~~aY~~l~ 14 (14)
T PF07709_consen 2 KFEKVKNAYEQLS 14 (14)
T ss_pred cHHHHHHHHHhcC
Confidence 5788889998774
No 139
>PF03833 PolC_DP2: DNA polymerase II large subunit DP2; InterPro: IPR016033 DP2 is the large subunit of a two-subunit novel archaebacterial replicative DNA polymerase first characterised for Pyrococcus furiosus. The structure of DP2 appears to be organised as a ~950 residue component separated from a ~300 residue component by a ~150 residue intein. The other subunit, DP1, has sequence similarity to the eukaryotic DNA polymerase delta small subunit. This entry represents the N-terminal ~950 residue component of DP2.; GO: 0003887 DNA-directed DNA polymerase activity; PDB: 3O59_X.
Probab=50.14 E-value=5.3 Score=44.79 Aligned_cols=50 Identities=20% Similarity=0.475 Sum_probs=0.0
Q ss_pred eecccCCCCCCccCCCccccCCCccccceEEeCCccccCCCCCCceEEeeeecccccCCcee
Q 012891 229 FVPCDSCHGRGFPADAKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTCKGSGVV 290 (454)
Q Consensus 229 ~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~C~~C~g~G~~ 290 (454)
...|+.|.-... ...|+.|+..-.. .-.|+.|+-. +....|+.|......
T Consensus 655 ~r~Cp~Cg~~t~-----~~~Cp~CG~~T~~-----~~~Cp~C~~~--~~~~~C~~C~~~~~~ 704 (900)
T PF03833_consen 655 RRRCPKCGKETF-----YNRCPECGSHTEP-----VYVCPDCGIE--VEEDECPKCGRETTS 704 (900)
T ss_dssp --------------------------------------------------------------
T ss_pred cccCcccCCcch-----hhcCcccCCcccc-----ceeccccccc--cCccccccccccCcc
Confidence 457888876654 4588888765332 2358888753 335689999877443
No 140
>TIGR00595 priA primosomal protein N'. All proteins in this family for which functions are known are components of the primosome which is involved in replication, repair, and recombination.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=49.44 E-value=12 Score=40.16 Aligned_cols=50 Identities=20% Similarity=0.324 Sum_probs=30.9
Q ss_pred eecccCCCCCCccCCCccccCCCccccceEEeCCccccCCCCCCceEEeeeecccccCC
Q 012891 229 FVPCDSCHGRGFPADAKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTCKGS 287 (454)
Q Consensus 229 ~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~C~~C~g~ 287 (454)
...|..|.-. ..|+.|.+.=......-.-.|..|+-+-. +...|+.|.+.
T Consensus 213 ~~~C~~Cg~~--------~~C~~C~~~l~~h~~~~~l~Ch~Cg~~~~-~~~~Cp~C~s~ 262 (505)
T TIGR00595 213 NLLCRSCGYI--------LCCPNCDVSLTYHKKEGKLRCHYCGYQEP-IPKTCPQCGSE 262 (505)
T ss_pred eeEhhhCcCc--------cCCCCCCCceEEecCCCeEEcCCCcCcCC-CCCCCCCCCCC
Confidence 4678888764 57899976544332223456777763332 34678888765
No 141
>PRK00349 uvrA excinuclease ABC subunit A; Reviewed
Probab=48.48 E-value=12 Score=43.22 Aligned_cols=32 Identities=28% Similarity=0.593 Sum_probs=22.7
Q ss_pred ccCCCccccceEEeC-----CccccCCCCCCceEEee
Q 012891 247 KICSTCRGIGRVTIP-----PFTSTCSTCKGLGRIIK 278 (454)
Q Consensus 247 ~~C~~C~G~G~~~~~-----~~~~~C~~C~G~G~~~~ 278 (454)
-.|+.|.|.|.+... ....+|+.|+|+.+..+
T Consensus 739 G~C~~C~G~G~~~~~~~f~~~~~~~C~~C~G~R~~~e 775 (943)
T PRK00349 739 GRCEACQGDGVIKIEMHFLPDVYVPCDVCKGKRYNRE 775 (943)
T ss_pred CCCCcccccceEEEEeccCCCccccCccccCcccccc
Confidence 458888888887643 23568888888887543
No 142
>PF12991 DUF3875: Domain of unknown function, B. Theta Gene description (DUF3875); InterPro: IPR024451 This domain of unknown function is found in proteins from Bacteroidetes, including the conjugation system ATPase, TraG.
Probab=46.92 E-value=22 Score=25.89 Aligned_cols=24 Identities=38% Similarity=0.639 Sum_probs=19.2
Q ss_pred CCcEEEEEEEECCCC--CCHHHHHHH
Q 012891 403 HGDQYVRFRVNFPTA--LNERQRAIL 426 (454)
Q Consensus 403 rGdL~v~~~V~~P~~--ls~~q~~~l 426 (454)
.||+.|-|+|.+|+- ||.++-+.+
T Consensus 27 ~gDiTv~f~v~LPEiFtls~~eYea~ 52 (54)
T PF12991_consen 27 NGDITVAFRVELPEIFTLSEAEYEAI 52 (54)
T ss_pred CCCEEEEEEecCCeeEEechhHhHHh
Confidence 499999999999994 677665543
No 143
>COG5552 Uncharacterized conserved protein [Function unknown]
Probab=46.49 E-value=73 Score=24.82 Aligned_cols=31 Identities=16% Similarity=0.194 Sum_probs=25.4
Q ss_pred CcccccCCCCCCCHHHHHHHHHHHHHHhCCC
Q 012891 83 DPYELLGVPENASQDEIKKAFHMLAKQYHPD 113 (454)
Q Consensus 83 ~~Y~iLgv~~~a~~~eIk~ayr~la~~~HPD 113 (454)
|--+++|+++-|+..||+.|-++.++++.=-
T Consensus 4 NIk~LfnfdPPAT~~EvrdAAlQfVRKlSGt 34 (88)
T COG5552 4 NIKELFNFDPPATPVEVRDAALQFVRKLSGT 34 (88)
T ss_pred chHHHhCCCCCCCcHHHHHHHHHHHHHhcCC
Confidence 4456789999999999999999888886433
No 144
>PRK05580 primosome assembly protein PriA; Validated
Probab=46.28 E-value=14 Score=41.34 Aligned_cols=50 Identities=20% Similarity=0.416 Sum_probs=29.8
Q ss_pred eecccCCCCCCccCCCccccCCCccccceEEeCCccccCCCCCCceEEeeeecccccCC
Q 012891 229 FVPCDSCHGRGFPADAKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTCKGS 287 (454)
Q Consensus 229 ~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~C~~C~g~ 287 (454)
...|..|.-. ..|+.|.+.=......-...|..|+-+- .+...|+.|.+.
T Consensus 381 ~~~C~~Cg~~--------~~C~~C~~~l~~h~~~~~l~Ch~Cg~~~-~~~~~Cp~Cg~~ 430 (679)
T PRK05580 381 FLLCRDCGWV--------AECPHCDASLTLHRFQRRLRCHHCGYQE-PIPKACPECGST 430 (679)
T ss_pred ceEhhhCcCc--------cCCCCCCCceeEECCCCeEECCCCcCCC-CCCCCCCCCcCC
Confidence 4678888754 5788887743322222234677777442 234578888765
No 145
>PF10041 DUF2277: Uncharacterized conserved protein (DUF2277); InterPro: IPR018735 Members of this family of hypothetical bacterial proteins have no known function.
Probab=45.93 E-value=97 Score=24.33 Aligned_cols=51 Identities=20% Similarity=0.223 Sum_probs=34.1
Q ss_pred cccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHH----HHHHHHHhhhh
Q 012891 86 ELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQ----EIRDAYETLRD 137 (454)
Q Consensus 86 ~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~----~i~~Ay~vL~d 137 (454)
.+.|+.+.|+.+||..|=.+.++|.-=-..+. ....+.|. +|..|-.-|.|
T Consensus 7 ~L~~fePpaT~~EI~aAAlQyVRKvSG~~~Ps-~an~eaF~~AV~eva~at~~LL~ 61 (78)
T PF10041_consen 7 TLRNFEPPATDEEIRAAALQYVRKVSGFRKPS-AANAEAFDRAVAEVAAATRRLLD 61 (78)
T ss_pred hhcCCCCCCCHHHHHHHHHHHHHHHccCCCcc-hhhHHHHHHHHHHHHHHHHHHHH
Confidence 45588899999999999999999875433332 22344554 55555555554
No 146
>PRK03564 formate dehydrogenase accessory protein FdhE; Provisional
Probab=45.51 E-value=22 Score=35.64 Aligned_cols=10 Identities=20% Similarity=0.338 Sum_probs=6.2
Q ss_pred eecccCCCCC
Q 012891 229 FVPCDSCHGR 238 (454)
Q Consensus 229 ~~~C~~C~G~ 238 (454)
...||.|.+.
T Consensus 187 ~~~CPvCGs~ 196 (309)
T PRK03564 187 RQFCPVCGSM 196 (309)
T ss_pred CCCCCCCCCc
Confidence 3567777654
No 147
>PF14353 CpXC: CpXC protein
Probab=44.57 E-value=17 Score=31.21 Aligned_cols=14 Identities=36% Similarity=0.733 Sum_probs=9.1
Q ss_pred ccccCCCCCCceEE
Q 012891 263 FTSTCSTCKGLGRI 276 (454)
Q Consensus 263 ~~~~C~~C~G~G~~ 276 (454)
+..+|+.|+....+
T Consensus 37 ~~~~CP~Cg~~~~~ 50 (128)
T PF14353_consen 37 FSFTCPSCGHKFRL 50 (128)
T ss_pred CEEECCCCCCceec
Confidence 36677777766653
No 148
>COG0178 UvrA Excinuclease ATPase subunit [DNA replication, recombination, and repair]
Probab=43.69 E-value=14 Score=41.67 Aligned_cols=28 Identities=29% Similarity=0.652 Sum_probs=16.5
Q ss_pred ccCCCCCCceEEe-e--------eecccccCCceeec
Q 012891 265 STCSTCKGLGRII-K--------DHCMTCKGSGVVDG 292 (454)
Q Consensus 265 ~~C~~C~G~G~~~-~--------~~C~~C~g~G~~~~ 292 (454)
-.|..|.|.|.+. + .+|..|+|+-+..+
T Consensus 731 GRCe~C~GdG~ikIeM~FLpdVyv~CevC~GkRYn~E 767 (935)
T COG0178 731 GRCEACQGDGVIKIEMHFLPDVYVPCEVCHGKRYNRE 767 (935)
T ss_pred cCCccccCCceEEEEeccCCCceeeCCCcCCcccccc
Confidence 4566666666542 1 46777777655544
No 149
>PRK12336 translation initiation factor IF-2 subunit beta; Provisional
Probab=43.49 E-value=64 Score=30.27 Aligned_cols=14 Identities=29% Similarity=0.662 Sum_probs=8.9
Q ss_pred eceeecccCCCCCC
Q 012891 226 FDAFVPCDSCHGRG 239 (454)
Q Consensus 226 ~~~~~~C~~C~G~G 239 (454)
+...+.|+.|+-.-
T Consensus 95 i~~yV~C~~C~~pd 108 (201)
T PRK12336 95 VDEYVICSECGLPD 108 (201)
T ss_pred HHheEECCCCCCCC
Confidence 34567888777643
No 150
>cd02639 R3H_RRM R3H domain of mainly fungal proteins which are associated with a RNA recognition motif (RRM) domain. Present in this group is the RNA-binding post-transcriptional regulator Cip2 (Csx1-interacting protein 2) involved in counteracting Csx1 function. Csx1 plays a central role in controlling gene expression during oxidative stress. The name of the R3H domain comes from the characteristic spacing of the most conserved arginine and histidine residues. The function of the domain is predicted to bind ssDNA or ssRNA in a sequence-specific manner.
Probab=43.43 E-value=35 Score=25.55 Aligned_cols=29 Identities=28% Similarity=0.360 Sum_probs=24.5
Q ss_pred EEEEECCCCCCHHHHHHHHHHHHHhcccC
Q 012891 409 RFRVNFPTALNERQRAILEEFAEEEINNE 437 (454)
Q Consensus 409 ~~~V~~P~~ls~~q~~~l~~~~~~~~~~~ 437 (454)
...+.||.+||++||..+-.++....-..
T Consensus 17 ~~eL~Fp~~ls~~eRriih~la~~lGL~~ 45 (60)
T cd02639 17 RDELAFPSSLSPAERRIVHLLASRLGLNH 45 (60)
T ss_pred ceEEEcCCCCCHHHHHHHHHHHHHcCCce
Confidence 56789999999999999999998765443
No 151
>PF04246 RseC_MucC: Positive regulator of sigma(E), RseC/MucC; InterPro: IPR007359 This bacterial family of integral membrane proteins represents a positive regulator of the sigma(E) transcription factor, namely RseC/MucC. The sigma(E) transcription factor is up-regulated by cell envelope protein misfolding, and regulates the expression of genes that are collectively termed ECF (devoted to Extra-Cellular Functions) []. In Pseudomonas aeruginosa, derepression of sigma(E) is associated with the alginate-overproducing phenotype characteristic of chronic respiratory tract colonization in cystic fibrosis patients. The mechanism by which RseC/MucC positively regulates the sigma(E) transcription factor is unknown. RseC is also thought to have a role in thiamine biosynthesis in Salmonella typhimurium []. In addition, this family also includes an N-terminal part of RnfF, a Rhodobacter capsulatus protein, of unknown function, that is essential for nitrogen fixation. This protein also contains a domain found in ApbE protein IPR003374 from INTERPRO, which is itself involved in thiamine biosynthesis.
Probab=43.12 E-value=37 Score=29.46 Aligned_cols=22 Identities=23% Similarity=0.365 Sum_probs=14.9
Q ss_pred eEEEEEEecCccCCCCEEEECC
Q 012891 293 VKEVKVTIPAGVDSGDTIRVPE 314 (454)
Q Consensus 293 ~~~~~V~Ip~G~~~G~~i~~~g 314 (454)
...+++.-+.+++.||.+.+.-
T Consensus 41 ~~~~~~~~~~~~~~GD~V~v~i 62 (135)
T PF04246_consen 41 PITFRAPNPIGAKVGDRVEVEI 62 (135)
T ss_pred cEEEEecCCCCCCCCCEEEEEe
Confidence 3566666677788888776653
No 152
>PF12434 Malate_DH: Malate dehydrogenase enzyme
Probab=42.49 E-value=27 Score=21.71 Aligned_cols=17 Identities=18% Similarity=0.444 Sum_probs=14.7
Q ss_pred HHHHHHHHHHHHHHhCC
Q 012891 96 QDEIKKAFHMLAKQYHP 112 (454)
Q Consensus 96 ~~eIk~ayr~la~~~HP 112 (454)
.++.|.+.|+.|+.||-
T Consensus 10 ~~~~r~~lR~AALeYHe 26 (28)
T PF12434_consen 10 KEDKRAQLRQAALEYHE 26 (28)
T ss_pred hHHHHHHHHHHHHHhcc
Confidence 37789999999999993
No 153
>PRK05978 hypothetical protein; Provisional
Probab=41.50 E-value=14 Score=32.92 Aligned_cols=8 Identities=50% Similarity=1.281 Sum_probs=4.0
Q ss_pred eeeccccc
Q 012891 278 KDHCMTCK 285 (454)
Q Consensus 278 ~~~C~~C~ 285 (454)
.+.|+.|.
T Consensus 52 ~~~C~~CG 59 (148)
T PRK05978 52 VDHCAACG 59 (148)
T ss_pred CCCccccC
Confidence 34555554
No 154
>TIGR02300 FYDLN_acid conserved hypothetical protein TIGR02300. Members of this family are bacterial proteins with a conserved motif [KR]FYDLN, sometimes flanked by a pair of CXXC motifs, followed by a long region of low complexity sequence in which roughly half the residues are Asp and Glu, including multiple runs of five or more acidic residues. The function of members of this family is unknown.
Probab=40.47 E-value=18 Score=31.33 Aligned_cols=28 Identities=4% Similarity=0.087 Sum_probs=19.6
Q ss_pred ceeecccCCCCCCccCCCccccCCCccc
Q 012891 227 DAFVPCDSCHGRGFPADAKTKICSTCRG 254 (454)
Q Consensus 227 ~~~~~C~~C~G~G~~~~~~~~~C~~C~G 254 (454)
..++.|+.|.-.-+--+..+.+||.|+-
T Consensus 7 GtKr~Cp~cg~kFYDLnk~p~vcP~cg~ 34 (129)
T TIGR02300 7 GTKRICPNTGSKFYDLNRRPAVSPYTGE 34 (129)
T ss_pred CccccCCCcCccccccCCCCccCCCcCC
Confidence 3456788887777666667778887754
No 155
>TIGR00340 zpr1_rel ZPR1-related zinc finger protein. A model ZPR1_znf (TIGR00310) has been created to describe the domain shared by this protein and ZPR1.
Probab=39.03 E-value=42 Score=30.47 Aligned_cols=20 Identities=20% Similarity=0.340 Sum_probs=12.1
Q ss_pred EEEEEecCcc-CCCCEEEECC
Q 012891 295 EVKVTIPAGV-DSGDTIRVPE 314 (454)
Q Consensus 295 ~~~V~Ip~G~-~~G~~i~~~g 314 (454)
.+.+.||||. ..|..-.++|
T Consensus 78 El~lei~pg~~~~G~iTTVEG 98 (163)
T TIGR00340 78 ELGIKIEPGPASQGYISNIEG 98 (163)
T ss_pred ceeEEecCCCcCCceEEehHh
Confidence 4567777776 4665555544
No 156
>PF07295 DUF1451: Protein of unknown function (DUF1451); InterPro: IPR009912 This family consists of several hypothetical bacterial proteins of around 160 residues in length. Members of this family contain four highly conserved cysteine resides toward the C-terminal region of the protein. The function of this family is unknown.
Probab=36.55 E-value=34 Score=30.47 Aligned_cols=35 Identities=20% Similarity=0.372 Sum_probs=16.5
Q ss_pred CCCccccCCCccccceEEeCCccccCCCCCCceEE
Q 012891 242 ADAKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRI 276 (454)
Q Consensus 242 ~~~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~ 276 (454)
.+....+|..|+-.=.+..+..-.+|+.|++..+.
T Consensus 108 ~g~G~l~C~~Cg~~~~~~~~~~l~~Cp~C~~~~F~ 142 (146)
T PF07295_consen 108 VGPGTLVCENCGHEVELTHPERLPPCPKCGHTEFT 142 (146)
T ss_pred ecCceEecccCCCEEEecCCCcCCCCCCCCCCeee
Confidence 33344566666443333222223456666665554
No 157
>PRK00564 hypA hydrogenase nickel incorporation protein; Provisional
Probab=35.24 E-value=48 Score=28.20 Aligned_cols=38 Identities=13% Similarity=0.312 Sum_probs=18.0
Q ss_pred Ccceeee-eceeecccCCCCCCccCCCccccCCCccccc
Q 012891 219 GCTKHVS-FDAFVPCDSCHGRGFPADAKTKICSTCRGIG 256 (454)
Q Consensus 219 G~~k~v~-~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G 256 (454)
|++..+. ++....|..|.-...........||.|++..
T Consensus 60 ga~L~Ie~vp~~~~C~~Cg~~~~~~~~~~~~CP~Cgs~~ 98 (117)
T PRK00564 60 DAILDIVDEKVELECKDCSHVFKPNALDYGVCEKCHSKN 98 (117)
T ss_pred CCEEEEEecCCEEEhhhCCCccccCCccCCcCcCCCCCc
Confidence 4444432 3455678888744322222222366665544
No 158
>PF07092 DUF1356: Protein of unknown function (DUF1356); InterPro: IPR009790 This family consists of several hypothetical mammalian proteins of around 250 residues in length. The function of this family is unknown.
Probab=32.42 E-value=25 Score=33.79 Aligned_cols=12 Identities=50% Similarity=1.262 Sum_probs=7.4
Q ss_pred ccCCCccccceE
Q 012891 247 KICSTCRGIGRV 258 (454)
Q Consensus 247 ~~C~~C~G~G~~ 258 (454)
.+||.|.|+|++
T Consensus 39 vtCPTCqGtGrI 50 (238)
T PF07092_consen 39 VTCPTCQGTGRI 50 (238)
T ss_pred CcCCCCcCCccC
Confidence 466666666665
No 159
>PRK00635 excinuclease ABC subunit A; Provisional
Probab=31.87 E-value=17 Score=44.83 Aligned_cols=28 Identities=39% Similarity=0.688 Sum_probs=18.7
Q ss_pred cCCCCCCceEEe---------eeecccccCCceeece
Q 012891 266 TCSTCKGLGRII---------KDHCMTCKGSGVVDGV 293 (454)
Q Consensus 266 ~C~~C~G~G~~~---------~~~C~~C~g~G~~~~~ 293 (454)
.|+.|.|.|.+. ..+|..|+|+.+..+.
T Consensus 1609 rC~~C~G~G~i~i~m~fl~dv~~~C~~C~G~R~~~e~ 1645 (1809)
T PRK00635 1609 QCSDCWGLGYQWIDRAFYALEKRPCPTCSGFRIQPLA 1645 (1809)
T ss_pred CCCCCccCceEEEecccCCCcccCCCCCCCcCCCHHH
Confidence 477777777653 2468888877665543
No 160
>PF07092 DUF1356: Protein of unknown function (DUF1356); InterPro: IPR009790 This family consists of several hypothetical mammalian proteins of around 250 residues in length. The function of this family is unknown.
Probab=31.67 E-value=22 Score=34.25 Aligned_cols=15 Identities=33% Similarity=0.731 Sum_probs=11.2
Q ss_pred eecccCCCCCCccCC
Q 012891 229 FVPCDSCHGRGFPAD 243 (454)
Q Consensus 229 ~~~C~~C~G~G~~~~ 243 (454)
.+.||+|+|+|..+.
T Consensus 38 ~vtCPTCqGtGrIP~ 52 (238)
T PF07092_consen 38 SVTCPTCQGTGRIPR 52 (238)
T ss_pred CCcCCCCcCCccCCc
Confidence 457888888887764
No 161
>PF08792 A2L_zn_ribbon: A2L zinc ribbon domain; InterPro: IPR014900 This zinc ribbon protein is found associated with some viral A2L transcription factors [].
Probab=30.98 E-value=30 Score=22.56 Aligned_cols=11 Identities=55% Similarity=1.017 Sum_probs=4.9
Q ss_pred cCCCccccceE
Q 012891 248 ICSTCRGIGRV 258 (454)
Q Consensus 248 ~C~~C~G~G~~ 258 (454)
.|+.|++.|.+
T Consensus 5 ~C~~C~~~~i~ 15 (33)
T PF08792_consen 5 KCSKCGGNGIV 15 (33)
T ss_pred EcCCCCCCeEE
Confidence 34444444433
No 162
>smart00276 GLECT Galectin. Galectin - galactose-binding lectin
Probab=30.94 E-value=63 Score=27.64 Aligned_cols=42 Identities=33% Similarity=0.561 Sum_probs=30.2
Q ss_pred EEeCCCCCCCcEEEEcCCCcCCCC-----CCCCCCcEEEEEEEECCC
Q 012891 375 VKIPKGVQPGQLLVLRGKGLAKNG-----LFLDHGDQYVRFRVNFPT 416 (454)
Q Consensus 375 v~ip~~~~~g~~~~l~g~Gmp~~~-----~~~~rGdL~v~~~V~~P~ 416 (454)
..||.+..+|+.+.|.|.=.+..+ .....+|+.++|++.|++
T Consensus 3 ~~lp~~l~~G~~i~i~G~~~~~~~~F~inl~~~~~di~lH~n~rf~~ 49 (128)
T smart00276 3 LPIPGGLKPGQTLTVRGIVLPDAKRFSINLLTGGDDIALHFNPRFNE 49 (128)
T ss_pred ccCCCCCCCCCEEEEEEEECCCCCEEEEEeecCCCCEEEEEeccCCC
Confidence 467888999999999876443321 112237999999999985
No 163
>PRK12380 hydrogenase nickel incorporation protein HybF; Provisional
Probab=30.68 E-value=55 Score=27.70 Aligned_cols=37 Identities=24% Similarity=0.409 Sum_probs=16.9
Q ss_pred Ccceeee-eceeecccCCCCCCccCCCccccCCCccccc
Q 012891 219 GCTKHVS-FDAFVPCDSCHGRGFPADAKTKICSTCRGIG 256 (454)
Q Consensus 219 G~~k~v~-~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G 256 (454)
|++..+. ++....|..|........ ....||.|++..
T Consensus 59 gA~L~I~~vp~~~~C~~Cg~~~~~~~-~~~~CP~Cgs~~ 96 (113)
T PRK12380 59 GCDLHIVYKPAQAWCWDCSQVVEIHQ-HDAQCPHCHGER 96 (113)
T ss_pred CCEEEEEeeCcEEEcccCCCEEecCC-cCccCcCCCCCC
Confidence 4444443 344566777764433221 122355555443
No 164
>COG3635 Predicted phosphoglycerate mutase, AP superfamily [Carbohydrate transport and metabolism]
Probab=30.62 E-value=1.4e+02 Score=30.94 Aligned_cols=94 Identities=22% Similarity=0.381 Sum_probs=56.8
Q ss_pred EEecCccCCCC------------EEEECCCcCCCC----CCCCCccEEEEEEEec-CC----cccccCCCeEEEEeeCHH
Q 012891 298 VTIPAGVDSGD------------TIRVPEAGNAGG----RGRQHGNLFIKLKVAD-DP----IFSRDGADVYVDSNISFT 356 (454)
Q Consensus 298 V~Ip~G~~~G~------------~i~~~g~G~~~~----~g~~~GDL~v~i~v~~-h~----~f~R~G~DL~~~~~Isl~ 356 (454)
-.|+||+.+|+ ...+.|.|--.. -...+||+.|+-+... .. +--|+...+..+-.=.|.
T Consensus 49 ~~i~pGi~pGSd~ahLsl~GYDP~~yy~GRGplEAlG~Gv~l~~gDvAfR~NfaTvd~~~~vivDRRAGRi~~ee~~~l~ 128 (408)
T COG3635 49 DPIKPGIRPGSDTAHLSLFGYDPYKYYTGRGPLEALGAGVELKPGDVAFRANFATVDEDGGVVVDRRAGRISTEEAEELA 128 (408)
T ss_pred cccCCCCCCCCCcceeeeeccCcceeecCCChHHHhcCCccccCCCEEEEeeeeEecCCCcEEEeccCCCCChhhHHHHH
Confidence 45778888875 223445542111 1245899999877553 21 122333344333334466
Q ss_pred HHhCCCEEEEeCCCCEEEEEeCCCCCCCcEEEEcCCCcCC
Q 012891 357 QAILGGKVDVPTLSGKVQVKIPKGVQPGQLLVLRGKGLAK 396 (454)
Q Consensus 357 eAllG~~~~i~tldG~~~v~ip~~~~~g~~~~l~g~Gmp~ 396 (454)
++|.+-.+++. +++.+-+++.+--+++++|.|...
T Consensus 129 ~~l~~~~~e~~-----v~~~f~~g~~hR~vlV~rg~~~~d 163 (408)
T COG3635 129 DALNEEEVEIG-----VKVRFKAGVEHRAVLVLRGPGLSD 163 (408)
T ss_pred HHHhhhhcccc-----eEEEEEeccceEEEEEEecCCCcc
Confidence 67665444433 677788888888899999999983
No 165
>TIGR01562 FdhE formate dehydrogenase accessory protein FdhE. The only sequence scoring between trusted and noise is that from Aquifex aeolicus, which shows certain structural differences from the proteobacterial forms in the alignment. However it is notable that A. aeolicus also has a sequence scoring above trusted to the alpha subunit of formate dehydrogenase (TIGR01553).
Probab=29.12 E-value=57 Score=32.71 Aligned_cols=16 Identities=19% Similarity=0.079 Sum_probs=11.0
Q ss_pred HHHHHHHHHHHhCCCC
Q 012891 99 IKKAFHMLAKQYHPDA 114 (454)
Q Consensus 99 Ik~ayr~la~~~HPD~ 114 (454)
-++.+.+|..++.|..
T Consensus 100 w~~~l~~LL~~l~~~~ 115 (305)
T TIGR01562 100 WLPWLDALLAGYPAPA 115 (305)
T ss_pred HHHHHHHHHHHhcccc
Confidence 3667777777777773
No 166
>COG0178 UvrA Excinuclease ATPase subunit [DNA replication, recombination, and repair]
Probab=29.05 E-value=46 Score=37.71 Aligned_cols=32 Identities=25% Similarity=0.563 Sum_probs=22.1
Q ss_pred ccCCCccccceEEeC-----CccccCCCCCCceEEee
Q 012891 247 KICSTCRGIGRVTIP-----PFTSTCSTCKGLGRIIK 278 (454)
Q Consensus 247 ~~C~~C~G~G~~~~~-----~~~~~C~~C~G~G~~~~ 278 (454)
-.|..|.|.|.+.+. .+-.+|+.|+|+-+-.+
T Consensus 731 GRCe~C~GdG~ikIeM~FLpdVyv~CevC~GkRYn~E 767 (935)
T COG0178 731 GRCEACQGDGVIKIEMHFLPDVYVPCEVCHGKRYNRE 767 (935)
T ss_pred cCCccccCCceEEEEeccCCCceeeCCCcCCcccccc
Confidence 578888888876543 23567888888876443
No 167
>PF09862 DUF2089: Protein of unknown function (DUF2089); InterPro: IPR018658 This family consists of various hypothetical prokaryotic proteins.
Probab=27.37 E-value=45 Score=28.34 Aligned_cols=20 Identities=25% Similarity=0.690 Sum_probs=15.0
Q ss_pred CCCCCCceEEeeeecccccC
Q 012891 267 CSTCKGLGRIIKDHCMTCKG 286 (454)
Q Consensus 267 C~~C~G~G~~~~~~C~~C~g 286 (454)
||.|++.=.+.+..|..|..
T Consensus 1 CPvCg~~l~vt~l~C~~C~t 20 (113)
T PF09862_consen 1 CPVCGGELVVTRLKCPSCGT 20 (113)
T ss_pred CCCCCCceEEEEEEcCCCCC
Confidence 67777777777788888875
No 168
>cd06007 R3H_DEXH_helicase R3H domain of a group of proteins which also contain a DEXH-box helicase domain, and may function as ATP-dependent DNA or RNA helicases. The name of the R3H domain comes from the characteristic spacing of the most conserved arginine and histidine residues. The function of the domain is predicted to bind ssDNA or ssRNA in a sequence-specific manner.
Probab=26.72 E-value=94 Score=23.11 Aligned_cols=26 Identities=19% Similarity=0.413 Sum_probs=22.5
Q ss_pred EEEEECCCCCCHHHHHHHHHHHHHhc
Q 012891 409 RFRVNFPTALNERQRAILEEFAEEEI 434 (454)
Q Consensus 409 ~~~V~~P~~ls~~q~~~l~~~~~~~~ 434 (454)
.-...||..||+.+|..+-+++....
T Consensus 16 ~~~l~Fpp~ls~~eR~~vH~~a~~~g 41 (59)
T cd06007 16 NEEYEFPSSLTNHERAVIHRLCRKLG 41 (59)
T ss_pred ccEEEcCCCCCHHHHHHHHHHHHHcC
Confidence 45678999999999999999998753
No 169
>PRK14051 negative regulator GrlR; Provisional
Probab=26.34 E-value=1.9e+02 Score=24.33 Aligned_cols=70 Identities=10% Similarity=0.051 Sum_probs=35.1
Q ss_pred ccEEEEEEEecCCcccccCCCeEEEEeeC--HHHHhCCCEEEEeCCCCEEEEEeCCCCCCCcEEEEcCCCcCC
Q 012891 326 GNLFIKLKVADDPIFSRDGADVYVDSNIS--FTQAILGGKVDVPTLSGKVQVKIPKGVQPGQLLVLRGKGLAK 396 (454)
Q Consensus 326 GDL~v~i~v~~h~~f~R~G~DL~~~~~Is--l~eAllG~~~~i~tldG~~~v~ip~~~~~g~~~~l~g~Gmp~ 396 (454)
-||++.+.=..|..-.--+-+--+.+.|+ +.+.-.|+++.-. ..|...+.|...++-=..++|++-|||.
T Consensus 48 ~~iilhvhR~n~ei~SVf~~eqdy~L~i~kk~~sn~~~~~l~~H-V~~Nekl~vdv~akFI~~LvI~~~~~~~ 119 (123)
T PRK14051 48 EDIILHVHRYNYEIPSVLNIEQDYQLVIPKKVLSNDNNLTLHCH-VRGNEKLFVDVYAKFIEPLVIKNTGMPQ 119 (123)
T ss_pred ceeEEEEEecccccccccCccccEEEecchhheeCCCCeEEEEE-EcCCcEEEEEEeeeeeeeeEEccCCCcc
Confidence 45566655555554444344444556666 3343334443322 2332233333323333458999999994
No 170
>PF03589 Antiterm: Antitermination protein; InterPro: IPR003222 This entry consists of antitermination proteins found in bacteriophages, such as protein Q from phage lambda, and some bacterial homologues. Protein Q positively regulates expression of the phage late gene operon by binding to the bacterial host RNA polymerase (RNAP) and modifying it. The modified RNAP transcribes through termination sites that otherwise prevent expression of the regulated genes [].; GO: 0003677 DNA binding, 0006355 regulation of transcription, DNA-dependent
Probab=25.90 E-value=36 Score=27.95 Aligned_cols=11 Identities=36% Similarity=0.887 Sum_probs=6.1
Q ss_pred cCCCCCCceEE
Q 012891 266 TCSTCKGLGRI 276 (454)
Q Consensus 266 ~C~~C~G~G~~ 276 (454)
.|..|.|.|..
T Consensus 34 ~c~rcgg~G~s 44 (95)
T PF03589_consen 34 DCERCGGRGYS 44 (95)
T ss_pred hhhhhcCCCCC
Confidence 46666655543
No 171
>COG5435 Uncharacterized conserved protein [Function unknown]
Probab=25.62 E-value=1.4e+02 Score=26.48 Aligned_cols=36 Identities=19% Similarity=0.369 Sum_probs=31.3
Q ss_pred CCCcEEEEEEEECCCCCCHHHHHHHHHHHHHhcccC
Q 012891 402 DHGDQYVRFRVNFPTALNERQRAILEEFAEEEINNE 437 (454)
Q Consensus 402 ~rGdL~v~~~V~~P~~ls~~q~~~l~~~~~~~~~~~ 437 (454)
.+|+-.+.|....|..+++.|+++++++.+...-+.
T Consensus 108 ~~g~~vLifT~Tt~~~ftp~q~~~~~~~I~Sf~p~~ 143 (147)
T COG5435 108 ERGDTVLIFTLTTPGEFTPSQKKAWEQVIQSFVPNP 143 (147)
T ss_pred ccCCeEEEEEecCCCCCCHHHHHHHHHHHHhcCCCC
Confidence 469999999999999999999999999988764443
No 172
>PF08774 VRR_NUC: VRR-NUC domain; InterPro: IPR014883 This entry contains proteins with the VRR-NUC domain. It is associated with members of the PD-(D/E)XK nuclease superfamily, which include the type III restriction modification enzymes, for example StyLTI: (P40815 from SWISSPROT).; GO: 0016788 hydrolase activity, acting on ester bonds
Probab=25.10 E-value=1.5e+02 Score=23.93 Aligned_cols=27 Identities=19% Similarity=0.348 Sum_probs=22.8
Q ss_pred EEEEEEEECCC-CCCHHHHHHHHHHHHH
Q 012891 406 QYVRFRVNFPT-ALNERQRAILEEFAEE 432 (454)
Q Consensus 406 L~v~~~V~~P~-~ls~~q~~~l~~~~~~ 432 (454)
.+.-++|+.|. .|+++|++-|+.|...
T Consensus 62 ~~~~iEvK~p~~~ls~~Q~~~~~~l~~~ 89 (100)
T PF08774_consen 62 IFLFIEVKGPGDRLSPNQKEWIDKLREA 89 (100)
T ss_pred EEEEEEEcCCCCCcCHHHHHHHHHHHHC
Confidence 57788899995 7999999999988764
No 173
>cd02641 R3H_Smubp-2_like R3H domain of Smubp-2_like proteins. Smubp-2_like proteins also contain a helicase_like and an AN1-like Zinc finger domain and have been shown to bind single-stranded DNA. The name of the R3H domain comes from the characteristic spacing of the most conserved arginine and histidine residues. The function of the domain is predicted to bind ssDNA or ssRNA.
Probab=24.39 E-value=1e+02 Score=22.92 Aligned_cols=25 Identities=32% Similarity=0.523 Sum_probs=21.8
Q ss_pred EEEECCCCCCHHHHHHHHHHHHHhc
Q 012891 410 FRVNFPTALNERQRAILEEFAEEEI 434 (454)
Q Consensus 410 ~~V~~P~~ls~~q~~~l~~~~~~~~ 434 (454)
-.+.||.+||+.||..+-+++....
T Consensus 18 ~~l~F~p~ls~~eR~~vH~lA~~~g 42 (60)
T cd02641 18 TELEFPPTLSSHDRLLVHELAEELG 42 (60)
T ss_pred CcEECCCCCCHHHHHHHHHHHHHcC
Confidence 3578999999999999999998754
No 174
>PF10925 DUF2680: Protein of unknown function (DUF2680); InterPro: IPR024485 Members in this family of proteins are annotated as YckD however currently no function is known.
Probab=24.25 E-value=1e+02 Score=23.01 Aligned_cols=31 Identities=13% Similarity=0.302 Sum_probs=20.4
Q ss_pred CCHHHHHHHHHHHHHhcccCCCChhhhhhHHHhhccC
Q 012891 418 LNERQRAILEEFAEEEINNENNTSAEENWLYQQLSTG 454 (454)
Q Consensus 418 ls~~q~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 454 (454)
||++|++.|++|....... .-.|.++.|+.|
T Consensus 1 lT~~Qk~el~~l~~qm~e~------kK~~idk~Ve~G 31 (59)
T PF10925_consen 1 LTDQQKKELKALYKQMLEL------KKQIIDKYVEAG 31 (59)
T ss_pred CCHHHHHHHHHHHHHHHHH------HHHHHHHHHHcC
Confidence 7899999998887765332 234555555544
No 175
>TIGR00100 hypA hydrogenase nickel insertion protein HypA. In Hpylori, hypA mutant abolished hydrogenase activity and decrease in urease activity. Nickel supplementation in media restored urease activity and partial hydrogenase activity. HypA probably involved in inserting Ni in enzymes.
Probab=24.17 E-value=72 Score=27.03 Aligned_cols=11 Identities=18% Similarity=0.613 Sum_probs=6.4
Q ss_pred ceeecccCCCC
Q 012891 227 DAFVPCDSCHG 237 (454)
Q Consensus 227 ~~~~~C~~C~G 237 (454)
+....|..|.-
T Consensus 68 p~~~~C~~Cg~ 78 (115)
T TIGR00100 68 PVECECEDCSE 78 (115)
T ss_pred CcEEEcccCCC
Confidence 34456777763
No 176
>PRK03681 hypA hydrogenase nickel incorporation protein; Validated
Probab=24.13 E-value=72 Score=27.02 Aligned_cols=19 Identities=32% Similarity=0.791 Sum_probs=9.6
Q ss_pred Ccceeee-eceeecccCCCC
Q 012891 219 GCTKHVS-FDAFVPCDSCHG 237 (454)
Q Consensus 219 G~~k~v~-~~~~~~C~~C~G 237 (454)
|++..+. .+....|..|.-
T Consensus 59 gA~L~i~~~p~~~~C~~Cg~ 78 (114)
T PRK03681 59 GCKLHLEEQEAECWCETCQQ 78 (114)
T ss_pred CCEEEEEeeCcEEEcccCCC
Confidence 4444443 234556777764
No 177
>PRK11032 hypothetical protein; Provisional
Probab=23.11 E-value=76 Score=28.72 Aligned_cols=16 Identities=6% Similarity=0.204 Sum_probs=10.3
Q ss_pred HHHHHHHHHHHHhCCC
Q 012891 98 EIKKAFHMLAKQYHPD 113 (454)
Q Consensus 98 eIk~ayr~la~~~HPD 113 (454)
.++++|.++....+-.
T Consensus 3 k~~~~Y~~ll~~v~~~ 18 (160)
T PRK11032 3 KVAQYYRELVASLTER 18 (160)
T ss_pred hHHHHHHHHHHHHHHH
Confidence 4677888877655433
No 178
>PRK00398 rpoP DNA-directed RNA polymerase subunit P; Provisional
Probab=22.94 E-value=64 Score=22.38 Aligned_cols=7 Identities=29% Similarity=0.942 Sum_probs=3.2
Q ss_pred cCCCccc
Q 012891 248 ICSTCRG 254 (454)
Q Consensus 248 ~C~~C~G 254 (454)
.|+.|+.
T Consensus 5 ~C~~CG~ 11 (46)
T PRK00398 5 KCARCGR 11 (46)
T ss_pred ECCCCCC
Confidence 3445543
No 179
>cd01388 SOX-TCF_HMG-box SOX-TCF_HMG-box, class I member of the HMG-box superfamily of DNA-binding proteins. These proteins contain a single HMG box, and bind the minor groove of DNA in a highly sequence-specific manner. Members include SRY and its homologs in insects and vertebrates, and transcription factor-like proteins, TCF-1, -3, -4, and LEF-1. They appear to bind the minor groove of the A/T C A A A G/C-motif.
Probab=22.70 E-value=1.5e+02 Score=22.41 Aligned_cols=42 Identities=19% Similarity=0.249 Sum_probs=31.0
Q ss_pred HHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHhhhhhhhhhhhccc
Q 012891 101 KAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRR 147 (454)
Q Consensus 101 ~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yd~~ 147 (454)
+..|...++-||+... .+..+.|.+.|..|++.++...+|..
T Consensus 14 ~~~r~~~~~~~p~~~~-----~eisk~l~~~Wk~ls~~eK~~y~~~a 55 (72)
T cd01388 14 KRHRRKVLQEYPLKEN-----RAISKILGDRWKALSNEEKQPYYEEA 55 (72)
T ss_pred HHHHHHHHHHCCCCCH-----HHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 4456666677888542 46778899999999998887766654
No 180
>KOG0315 consensus G-protein beta subunit-like protein (contains WD40 repeats) [General function prediction only]
Probab=22.69 E-value=86 Score=30.58 Aligned_cols=31 Identities=26% Similarity=0.373 Sum_probs=25.0
Q ss_pred EEEeeCHHHHhCC-CEEEEeCCCCEE-EEEeCC
Q 012891 349 VDSNISFTQAILG-GKVDVPTLSGKV-QVKIPK 379 (454)
Q Consensus 349 ~~~~Isl~eAllG-~~~~i~tldG~~-~v~ip~ 379 (454)
++..|-|+||+.| +..+|++.|+.+ .+.|.|
T Consensus 18 YDhTIRfWqa~tG~C~rTiqh~dsqVNrLeiTp 50 (311)
T KOG0315|consen 18 YDHTIRFWQALTGICSRTIQHPDSQVNRLEITP 50 (311)
T ss_pred CcceeeeeehhcCeEEEEEecCccceeeEEEcC
Confidence 3467889999999 688999999985 566654
No 181
>cd02640 R3H_NRF R3H domain of the NF-kappaB-repression factor (NRF). NRF is a nuclear inhibitor of NF-kappaB proteins that can silence the IFNbeta promoter via binding to a negative regulatory element (NRE). Beside R3H NRF also contains a G-patch domain. The name of the R3H domain comes from the characteristic spacing of the most conserved arginine and histidine residues. The function of the domain is predicted to bind ssDNA or ssRNA in a sequence-specific manner.
Probab=22.65 E-value=1.2e+02 Score=22.58 Aligned_cols=26 Identities=15% Similarity=0.272 Sum_probs=22.3
Q ss_pred EEEEECCCCCCHHHHHHHHHHHHHhc
Q 012891 409 RFRVNFPTALNERQRAILEEFAEEEI 434 (454)
Q Consensus 409 ~~~V~~P~~ls~~q~~~l~~~~~~~~ 434 (454)
.-.+.||..||+.+|.++-+++....
T Consensus 17 ~~~l~f~p~lt~~eR~~vH~~a~~~g 42 (60)
T cd02640 17 IRDMVFSPEFSKEERALIHQIAQKYG 42 (60)
T ss_pred cceEEcCCCCCHHHHHHHHHHHHHcC
Confidence 34688999999999999999998753
No 182
>PRK14559 putative protein serine/threonine phosphatase; Provisional
Probab=21.70 E-value=58 Score=36.19 Aligned_cols=49 Identities=18% Similarity=0.533 Sum_probs=30.4
Q ss_pred ecccCCCCCCccCCCccccCCCccccceEEeCCccccCCCCCCceEEeeeecccccCC
Q 012891 230 VPCDSCHGRGFPADAKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTCKGS 287 (454)
Q Consensus 230 ~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~C~~C~g~ 287 (454)
..|+.|+..- .....-|+.|+..-. ...|+.|+-.=..-...|..|...
T Consensus 2 ~~Cp~Cg~~n---~~~akFC~~CG~~l~------~~~Cp~CG~~~~~~~~fC~~CG~~ 50 (645)
T PRK14559 2 LICPQCQFEN---PNNNRFCQKCGTSLT------HKPCPQCGTEVPVDEAHCPNCGAE 50 (645)
T ss_pred CcCCCCCCcC---CCCCccccccCCCCC------CCcCCCCCCCCCcccccccccCCc
Confidence 3688886542 223457888844321 246888876644445688888865
No 183
>PF13719 zinc_ribbon_5: zinc-ribbon domain
Probab=21.67 E-value=43 Score=22.30 Aligned_cols=10 Identities=30% Similarity=0.866 Sum_probs=4.7
Q ss_pred ecccCCCCCC
Q 012891 230 VPCDSCHGRG 239 (454)
Q Consensus 230 ~~C~~C~G~G 239 (454)
+.|+.|+..-
T Consensus 3 i~CP~C~~~f 12 (37)
T PF13719_consen 3 ITCPNCQTRF 12 (37)
T ss_pred EECCCCCceE
Confidence 3455555443
No 184
>TIGR03655 anti_R_Lar restriction alleviation protein, Lar family. Restriction alleviation proteins provide a countermeasure to host cell restriction enzyme defense against foreign DNA such as phage or plasmids. This family consists of homologs to the phage antirestriction protein Lar, and most members belong to phage genomes or prophage regions of bacterial genomes.
Probab=21.66 E-value=1.1e+02 Score=21.94 Aligned_cols=10 Identities=30% Similarity=0.717 Sum_probs=5.7
Q ss_pred cCCCccccce
Q 012891 248 ICSTCRGIGR 257 (454)
Q Consensus 248 ~C~~C~G~G~ 257 (454)
.||-|.|...
T Consensus 3 PCPfCGg~~~ 12 (53)
T TIGR03655 3 PCPFCGGADV 12 (53)
T ss_pred CCCCCCCcce
Confidence 4566665555
No 185
>COG3058 FdhE Uncharacterized protein involved in formate dehydrogenase formation [Posttranslational modification, protein turnover, chaperones]
Probab=21.54 E-value=38 Score=33.31 Aligned_cols=58 Identities=17% Similarity=0.371 Sum_probs=33.4
Q ss_pred eceeecccCCCCCC---------ccCCCccccCCCccccceEEeCCccccCCCCCCceEE-------------eeeeccc
Q 012891 226 FDAFVPCDSCHGRG---------FPADAKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRI-------------IKDHCMT 283 (454)
Q Consensus 226 ~~~~~~C~~C~G~G---------~~~~~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~-------------~~~~C~~ 283 (454)
.+....|+.|.+.- ...|.+.-.|+-|...=.+ .+.+|..|+.++.. ....|.+
T Consensus 182 ~e~~~~CPvCGS~PvaSmV~~g~~~~GlRYL~CslC~teW~~----VR~KC~nC~~t~~l~y~sl~s~E~A~vkAEtC~~ 257 (308)
T COG3058 182 NESRQYCPVCGSMPVASMVQIGETEQGLRYLHCSLCETEWHY----VRVKCSNCEQSKKLHYWSLESSELAAVKAETCGD 257 (308)
T ss_pred ccccccCCCcCCCCcceeeeecCccccchhhhhhhHHHHHHH----HHHHhccccccCCccceeccchhhhHhhhhcCCc
Confidence 35566788886542 2233444566666432111 26678888877653 1257888
Q ss_pred ccCC
Q 012891 284 CKGS 287 (454)
Q Consensus 284 C~g~ 287 (454)
|++-
T Consensus 258 C~sY 261 (308)
T COG3058 258 CNSY 261 (308)
T ss_pred HHHH
Confidence 8764
No 186
>PF09297 zf-NADH-PPase: NADH pyrophosphatase zinc ribbon domain; InterPro: IPR015376 This domain has a zinc ribbon structure and is often found between two NUDIX domains.; GO: 0016787 hydrolase activity, 0046872 metal ion binding; PDB: 1VK6_A 2GB5_A.
Probab=21.50 E-value=62 Score=20.62 Aligned_cols=8 Identities=25% Similarity=0.999 Sum_probs=3.0
Q ss_pred cccCCCCC
Q 012891 264 TSTCSTCK 271 (454)
Q Consensus 264 ~~~C~~C~ 271 (454)
...|+.|+
T Consensus 21 ~r~C~~Cg 28 (32)
T PF09297_consen 21 ARRCPSCG 28 (32)
T ss_dssp -EEESSSS
T ss_pred EeECCCCc
Confidence 33444443
No 187
>KOG3442 consensus Uncharacterized conserved protein [Function unknown]
Probab=21.40 E-value=1.2e+02 Score=26.27 Aligned_cols=55 Identities=20% Similarity=0.244 Sum_probs=38.2
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHhhhhhhh
Q 012891 82 RDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEK 140 (454)
Q Consensus 82 ~~~Y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~ 140 (454)
..--.||+|+...+.+||.+.|..|-....+.+.+.---. .+|-.|-|-|-...+
T Consensus 59 qEa~qILnV~~~ln~eei~k~yehLFevNdkskGGSFYLQ----SKVfRAkErld~El~ 113 (132)
T KOG3442|consen 59 QEAQQILNVKEPLNREEIEKRYEHLFEVNDKSKGGSFYLQ----SKVFRAKERLDEELK 113 (132)
T ss_pred HHHhhHhCCCCCCCHHHHHHHHHHHHhccCcccCcceeeh----HHHHHHHHHHHHHHH
Confidence 4557899999999999999999999988877766532111 134445555554443
No 188
>PF01155 HypA: Hydrogenase expression/synthesis hypA family; InterPro: IPR000688 Bacterial membrane-bound nickel-dependent hydrogenases requires a number of accessory proteins which are involved in their maturation. The exact role of these proteins is not yet clear, but some seem to be required for the incorporation of the nickel ions []. One of these proteins is generally known as hypA. It is a protein of about 12 to 14 kDa that contains, in its C-terminal region, four conserved cysteines that form a zinc-finger like motif. Escherichia coli has two proteins that belong to this family, hypA and hybF. A homologue, MJ0214, has also been found in a number of archaeal species, including the genome of Methanocaldococcus jannaschii (Methanococcus jannaschii).; GO: 0016151 nickel ion binding, 0006464 protein modification process; PDB: 2KDX_A 3A44_D 3A43_B.
Probab=21.24 E-value=61 Score=27.35 Aligned_cols=29 Identities=21% Similarity=0.376 Sum_probs=11.6
Q ss_pred ceeecccCCCCCCccCCCccccCCCccccc
Q 012891 227 DAFVPCDSCHGRGFPADAKTKICSTCRGIG 256 (454)
Q Consensus 227 ~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G 256 (454)
+....|..|.......... ..||.|++..
T Consensus 68 p~~~~C~~Cg~~~~~~~~~-~~CP~Cgs~~ 96 (113)
T PF01155_consen 68 PARARCRDCGHEFEPDEFD-FSCPRCGSPD 96 (113)
T ss_dssp --EEEETTTS-EEECHHCC-HH-SSSSSS-
T ss_pred CCcEECCCCCCEEecCCCC-CCCcCCcCCC
Confidence 3455677776554332221 3455554443
No 189
>PF08273 Prim_Zn_Ribbon: Zinc-binding domain of primase-helicase; InterPro: IPR013237 This entry is represented by bacteriophage T7 Gp4. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. This entry represents a zinc binding domain found in the N-terminal region of the bacteriophage T7 Gp4 and P4 alpha protein. P4 is a multifunctional protein with origin recognition, helicase and primase activities [, , ].; GO: 0003896 DNA primase activity, 0004386 helicase activity, 0008270 zinc ion binding; PDB: 1NUI_B.
Probab=21.23 E-value=60 Score=22.20 Aligned_cols=11 Identities=36% Similarity=0.866 Sum_probs=4.4
Q ss_pred cCCCccccceE
Q 012891 248 ICSTCRGIGRV 258 (454)
Q Consensus 248 ~C~~C~G~G~~ 258 (454)
.||.|.|+.+.
T Consensus 5 pCP~CGG~DrF 15 (40)
T PF08273_consen 5 PCPICGGKDRF 15 (40)
T ss_dssp --TTTT-TTTE
T ss_pred CCCCCcCcccc
Confidence 45555555544
No 190
>COG1326 Uncharacterized archaeal Zn-finger protein [General function prediction only]
Probab=21.19 E-value=5e+02 Score=24.28 Aligned_cols=75 Identities=15% Similarity=0.212 Sum_probs=38.0
Q ss_pred EEEEEecCc--cCCCCEEEECCCcCCCCCCCCCccEEEEEEEecCCcc-cccCCCeEEEEeeCH-HHHhCCCEEEEeCCC
Q 012891 295 EVKVTIPAG--VDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIF-SRDGADVYVDSNISF-TQAILGGKVDVPTLS 370 (454)
Q Consensus 295 ~~~V~Ip~G--~~~G~~i~~~g~G~~~~~g~~~GDL~v~i~v~~h~~f-~R~G~DL~~~~~Isl-~eAllG~~~~i~tld 370 (454)
+-.|.+||| ++-|+.|.+.++- =.+-.|++.+-..- +-...||-+-.-.|+ ..+-.|.++..+...
T Consensus 64 ~~~vel~~gE~l~vGDei~vd~e~----------veITSIE~~~gkRV~~A~veeIeTVWgrsl~~p~~vgvSi~~~~~t 133 (201)
T COG1326 64 TKEVELDPGETLKVGDEIEVDGEE----------VEITSIELGGGKRVKSAKVEEIETVWGRSLVIPVEVGVSIHLKGKT 133 (201)
T ss_pred ceeEecCCCCeEecCCEEEEcCCE----------EEEEEEeeCCCccccccccceeeeEeeecccCccEEEEEEecCCce
Confidence 456888888 8888888887652 01122333222222 224456666555543 234455555555411
Q ss_pred CEEEEEeCC
Q 012891 371 GKVQVKIPK 379 (454)
Q Consensus 371 G~~~v~ip~ 379 (454)
-.+.+.+|.
T Consensus 134 ~s~kv~Vp~ 142 (201)
T COG1326 134 YSIKVVVPR 142 (201)
T ss_pred EEEEEEcCC
Confidence 123455553
No 191
>PF12791 RsgI_N: Anti-sigma factor N-terminus; InterPro: IPR024449 The heat shock genes in Bacillus subtilis can be classified into several groups according to their regulation [], and the sigma gene, sigI, of Bacillus subtilis belongs to the group IV heat-shock response genes and has many orthologues in the bacterial phylum Firmicutes []. Regulation of sigma factor I is carried out by RsgI from the same operon. This entry represents the N-terminal cytoplasmic portion of RsgI ('upstream' of the single transmembrane helix) which has been shown to interact directly with Sigma-I [].
Probab=21.07 E-value=2.1e+02 Score=20.53 Aligned_cols=34 Identities=24% Similarity=0.309 Sum_probs=25.5
Q ss_pred CCEEEEeCCCCE-EEEEeCCCCCCCcEEEEcCCCc
Q 012891 361 GGKVDVPTLSGK-VQVKIPKGVQPGQLLVLRGKGL 394 (454)
Q Consensus 361 G~~~~i~tldG~-~~v~ip~~~~~g~~~~l~g~Gm 394 (454)
+-...|-|.||. ++|+.+++..-|+++.+.-.-.
T Consensus 5 ~~~aiVlT~dGeF~~ik~~~~~~vG~eI~~~~~~~ 39 (56)
T PF12791_consen 5 KKYAIVLTPDGEFIKIKRKPGMEVGQEIEFDEKDI 39 (56)
T ss_pred CCEEEEEcCCCcEEEEeCCCCCcccCEEEEechhh
Confidence 456678889998 5788887888888887765443
Done!