Query 012891
Match_columns 454
No_of_seqs 386 out of 2805
Neff 7.5
Searched_HMMs 29240
Date Mon Mar 25 18:14:12 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012891.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/012891hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3lz8_A Putative chaperone DNAJ 100.0 8.7E-65 3E-69 506.5 20.5 284 79-431 25-315 (329)
2 1nlt_A Protein YDJ1, mitochond 100.0 8.7E-57 3E-61 433.1 19.4 226 199-427 8-248 (248)
3 3agx_A DNAJ homolog subfamily 100.0 2.6E-45 9E-50 337.0 20.2 177 202-430 2-179 (181)
4 2q2g_A HSP40 protein, heat sho 100.0 3.3E-44 1.1E-48 329.5 20.2 177 201-430 2-179 (180)
5 1c3g_A Heat shock protein 40; 100.0 6.2E-42 2.1E-46 311.6 15.4 169 203-427 1-170 (170)
6 3i38_A Putative chaperone DNAJ 99.9 3.1E-27 1.1E-31 198.7 12.4 96 335-433 2-97 (109)
7 1xao_A YDJ1, mitochondrial pro 99.9 1.5E-24 5E-29 185.9 10.8 94 339-433 1-99 (121)
8 1bq0_A DNAJ, HSP40; chaperone, 99.9 2.6E-22 8.7E-27 167.3 5.4 73 81-153 2-74 (103)
9 2dn9_A DNAJ homolog subfamily 99.9 8.2E-22 2.8E-26 156.3 8.0 73 79-151 4-76 (79)
10 1hdj_A Human HSP40, HDJ-1; mol 99.8 3.5E-21 1.2E-25 151.8 7.4 71 81-152 2-72 (77)
11 2ej7_A HCG3 gene; HCG3 protein 99.8 5.4E-21 1.8E-25 152.6 7.6 73 79-151 6-79 (82)
12 2ctr_A DNAJ homolog subfamily 99.8 4.6E-21 1.6E-25 155.1 7.1 72 79-151 4-75 (88)
13 2ctp_A DNAJ homolog subfamily 99.8 5.8E-21 2E-25 151.0 7.1 72 79-151 4-75 (78)
14 2yua_A Williams-beuren syndrom 99.8 4E-21 1.4E-25 158.9 6.4 72 77-148 12-83 (99)
15 2dmx_A DNAJ homolog subfamily 99.8 1.3E-20 4.3E-25 153.8 8.4 74 79-152 6-80 (92)
16 2ctq_A DNAJ homolog subfamily 99.8 9.2E-21 3.1E-25 160.2 6.7 73 79-151 17-89 (112)
17 2cug_A Mkiaa0962 protein; DNAJ 99.8 1.5E-20 5.3E-25 152.0 7.5 71 80-151 15-85 (88)
18 2ctw_A DNAJ homolog subfamily 99.8 1.7E-20 5.8E-25 157.8 6.6 73 79-151 14-86 (109)
19 2och_A Hypothetical protein DN 99.8 2.4E-20 8.1E-25 145.5 6.8 68 79-149 5-72 (73)
20 2lgw_A DNAJ homolog subfamily 99.8 3.4E-20 1.2E-24 153.1 6.5 72 82-153 2-74 (99)
21 1wjz_A 1700030A21RIK protein; 99.8 3.3E-20 1.1E-24 151.9 6.0 71 79-149 13-89 (94)
22 2o37_A Protein SIS1; HSP40, J- 99.8 3.1E-20 1E-24 151.5 5.2 70 79-151 5-74 (92)
23 2ctt_A DNAJ homolog subfamily 99.8 3.1E-20 1E-24 155.0 0.8 99 202-300 1-103 (104)
24 2qsa_A DNAJ homolog DNJ-2; J-d 99.8 3.8E-19 1.3E-23 149.6 5.0 70 80-149 13-86 (109)
25 3apq_A DNAJ homolog subfamily 99.7 1.4E-18 4.7E-23 162.4 6.3 72 82-153 2-73 (210)
26 2ys8_A RAB-related GTP-binding 99.7 2.9E-18 9.9E-23 139.1 6.3 62 81-143 26-87 (90)
27 2l6l_A DNAJ homolog subfamily 99.7 2.9E-18 1E-22 153.2 6.2 70 79-148 7-82 (155)
28 1iur_A KIAA0730 protein; DNAJ 99.7 3.1E-18 1.1E-22 137.9 3.8 68 76-143 10-78 (88)
29 3bvo_A CO-chaperone protein HS 99.7 8.9E-18 3E-22 156.5 7.4 100 42-147 9-115 (207)
30 1gh6_A Large T antigen; tumor 99.7 3.1E-18 1.1E-22 144.6 1.3 65 81-149 7-73 (114)
31 1faf_A Large T antigen; J doma 99.7 1.6E-17 5.5E-22 131.3 5.3 62 82-148 11-74 (79)
32 3hho_A CO-chaperone protein HS 99.7 2.3E-17 7.7E-22 150.0 5.9 68 81-148 3-77 (174)
33 2pf4_E Small T antigen; PP2A, 99.7 8.5E-18 2.9E-22 151.5 1.8 65 81-149 10-76 (174)
34 1n4c_A Auxilin; four helix bun 99.7 3.9E-17 1.3E-21 148.1 5.0 66 79-144 114-182 (182)
35 1fpo_A HSC20, chaperone protei 99.7 4.8E-17 1.7E-21 147.4 5.0 68 82-149 1-75 (171)
36 2qwo_B Putative tyrosine-prote 99.6 6.1E-17 2.1E-21 130.9 4.1 56 82-137 33-91 (92)
37 2guz_A Mitochondrial import in 99.6 2.5E-16 8.7E-21 121.8 4.2 59 79-141 11-70 (71)
38 3ag7_A Putative uncharacterize 99.6 2.9E-16 1E-20 130.8 3.3 60 79-139 38-104 (106)
39 3uo3_A J-type CO-chaperone JAC 99.6 4.2E-16 1.4E-20 142.2 3.9 66 80-148 9-81 (181)
40 3apo_A DNAJ homolog subfamily 99.5 4.7E-16 1.6E-20 172.2 1.0 75 79-153 18-92 (780)
41 1exk_A DNAJ protein; extended 99.3 1E-12 3.5E-17 103.6 5.0 74 219-292 1-78 (79)
42 1nlt_A Protein YDJ1, mitochond 99.3 5.7E-12 1.9E-16 120.8 10.1 131 207-339 31-236 (248)
43 2y4t_A DNAJ homolog subfamily 98.9 7.1E-10 2.4E-14 112.2 5.4 65 82-146 382-449 (450)
44 2guz_B Mitochondrial import in 98.8 4E-09 1.4E-13 79.4 4.3 54 82-139 4-60 (65)
45 3i38_A Putative chaperone DNAJ 98.7 1.7E-08 6E-13 84.2 6.2 74 200-340 9-82 (109)
46 1xao_A YDJ1, mitochondrial pro 98.7 1.2E-08 4.2E-13 86.8 4.4 76 200-339 4-81 (121)
47 2q2g_A HSP40 protein, heat sho 98.6 1.1E-07 3.7E-12 86.6 7.7 71 344-416 3-86 (180)
48 3lz8_A Putative chaperone DNAJ 98.5 1E-07 3.5E-12 94.7 6.7 73 342-415 138-224 (329)
49 3agx_A DNAJ homolog subfamily 98.5 1.8E-07 6.1E-12 85.2 7.4 71 344-416 2-86 (181)
50 1c3g_A Heat shock protein 40; 98.5 2.6E-07 8.8E-12 83.3 7.7 70 345-416 1-80 (170)
51 3lcz_A YCZA, inhibitor of trap 97.5 4.1E-05 1.4E-09 54.9 2.2 30 263-292 8-37 (53)
52 3pmq_A Decaheme cytochrome C M 97.4 1.5E-05 5.2E-10 85.4 -1.0 70 206-275 168-257 (669)
53 2ctt_A DNAJ homolog subfamily 97.4 8.6E-05 2.9E-09 61.1 3.5 48 229-280 45-97 (104)
54 1exk_A DNAJ protein; extended 97.4 6.7E-05 2.3E-09 58.3 2.6 45 229-277 28-77 (79)
55 2bx9_A Anti-trap, AT, tryptoph 96.7 0.00064 2.2E-08 48.6 2.4 24 266-289 11-34 (53)
56 3lcz_A YCZA, inhibitor of trap 96.7 0.00079 2.7E-08 48.1 2.6 28 247-278 10-37 (53)
57 2bx9_A Anti-trap, AT, tryptoph 96.5 0.0012 4.2E-08 47.2 2.6 26 230-258 10-35 (53)
58 2pzi_A Probable serine/threoni 88.0 0.28 9.5E-06 52.8 3.6 48 79-134 626-675 (681)
59 2aus_D NOP10, ribosome biogene 33.2 24 0.00081 25.4 2.2 23 246-274 5-27 (60)
60 2apo_B Ribosome biogenesis pro 31.6 28 0.00096 25.0 2.4 22 246-273 6-27 (60)
61 2cqn_A Formin-binding protein 30.5 64 0.0022 24.2 4.4 53 95-148 7-62 (77)
62 1msz_A DNA-binding protein smu 30.5 31 0.0011 26.7 2.6 24 411-434 35-58 (86)
63 1ltl_A DNA replication initiat 30.1 55 0.0019 30.8 5.0 17 417-433 255-271 (279)
64 3nyb_B Protein AIR2; polya RNA 27.1 49 0.0017 25.3 3.3 50 228-277 4-59 (83)
65 2ns6_A Mobilization protein A; 26.4 77 0.0026 28.0 4.9 32 403-434 67-99 (185)
66 3zxf_A Galectin-7; sugar bindi 24.8 1.2E+02 0.004 25.1 5.6 43 374-416 9-59 (138)
67 2lli_A Protein AIR2; RNA surve 24.4 27 0.00094 28.5 1.5 10 231-240 6-15 (124)
68 1y0p_A Fumarate reductase flav 22.2 7.6 0.00026 40.5 -3.0 57 231-287 13-88 (571)
69 2r0h_A CGL3 lectin; galectin-r 22.1 94 0.0032 27.0 4.5 43 374-416 10-67 (164)
70 4a3n_A Transcription factor SO 20.8 1.1E+02 0.0036 21.8 4.0 42 100-146 14-55 (71)
No 1
>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A
Probab=100.00 E-value=8.7e-65 Score=506.52 Aligned_cols=284 Identities=29% Similarity=0.548 Sum_probs=159.9
Q ss_pred CCCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHhhhhhhhhhhhcccccCCCCCcccc
Q 012891 79 SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSENEKYS 158 (454)
Q Consensus 79 ~~~~~~Y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yd~~~~~g~~~~~~~ 158 (454)
+...|||+||||+++||.+|||+|||+||++||||++++ ++|+++|++|++||++|+||.+|+.||+++..+... .++
T Consensus 25 m~~~d~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~-~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~~~~~-~~~ 102 (329)
T 3lz8_A 25 MELKDYYAILGVQPTDDLKTIKTAYRRLARKYHPDVSKE-NDAEAKFKDLAEAWEVLKDEQRRAEYDQLWQHRNDP-GFG 102 (329)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccCHHHHcCcCCCCCHHHHHHHHHHHHHHHCCCCCCC-hHHHHHHHHHHHHHHHhhhhhhhcccchhhccccCC-Ccc
Confidence 445799999999999999999999999999999999984 578999999999999999999999999984321100 000
Q ss_pred CCCCCCccccCCCCcccccccccccCcccchhcccccc-------ccccCCCCcEEEEEEEeeccccCcceeeeeceeec
Q 012891 159 AGDAEGFRYAGDAEGFRYAYQTHFSDSFHKIFSEIFED-------ETSHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVP 231 (454)
Q Consensus 159 ~~~~~~~~~~~~~~~f~~~~~~~f~~~f~~~F~~~f~~-------~~~~~g~di~~~l~itlee~~~G~~k~v~~~~~~~ 231 (454)
.++.+ .+++|. +.+|.++|+.+|++ ....+++|+.++|.|+|+|+|+|+++++.+++.+.
T Consensus 103 ----~~~~~--~~~~f~-------~~~f~diF~~~Fg~~g~~~~~~~~~~g~Dl~~~l~vsleea~~G~~k~i~i~~~v~ 169 (329)
T 3lz8_A 103 ----RQRQT--HEQSYS-------QQDFDDIFSSMFGQQAHQRRRQHAARGHDLEIEVAVFLEETLAEQTRTISYNLPVY 169 (329)
T ss_dssp -----------------------------------------------CCCCCCEEEEECCCTTGGGSCEEEEEEEEEEEC
T ss_pred ----ccccc--ccCCcC-------CCchhhhhHhhhcCcCCCCCCCCcCCCCCEEEEEecchhhhhhccceEEEEEEEee
Confidence 00100 001110 01344556666653 12457899999999999999999999999987653
Q ss_pred ccCCCCCCccCCCccccCCCccccceEEeCCccccCCCCCCceEEeeeecccccCCceeeceEEEEEEecCccCCCCEEE
Q 012891 232 CDSCHGRGFPADAKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCMTCKGSGVVDGVKEVKVTIPAGVDSGDTIR 311 (454)
Q Consensus 232 C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~~~~~~V~Ip~G~~~G~~i~ 311 (454)
| +. |.+ .+...++++|.||||+++|++|+
T Consensus 170 ~----g~-----------------G~v------------------------------~~~~~~~l~V~IP~Gv~~G~~Ir 198 (329)
T 3lz8_A 170 N----VF-----------------GMI------------------------------ESETPKTLNVKIPAGVVDGQRIR 198 (329)
T ss_dssp C----SC-----------------C-C------------------------------CEEEEEEEEEEECTTCCTTCEEE
T ss_pred c----CC-----------------eEE------------------------------EEecceEEEEeCCCCCCCCCEEE
Confidence 2 11 111 12335689999999999999999
Q ss_pred ECCCcCCCCCCCCCccEEEEEEEecCCcccccCCCeEEEEeeCHHHHhCCCEEEEeCCCCEEEEEeCCCCCCCcEEEEcC
Q 012891 312 VPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGKVQVKIPKGVQPGQLLVLRG 391 (454)
Q Consensus 312 ~~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~Isl~eAllG~~~~i~tldG~~~v~ip~~~~~g~~~~l~g 391 (454)
|+|+|+++..++.+|||||+|+|+||+.|+|+|+||+++++|+++||++|++++|+||||++.|+||+++++|++++|+|
T Consensus 199 l~G~G~~g~~gg~~GDL~v~I~v~~h~~F~R~G~DL~~~~~Isl~eAllG~~v~VptLdG~v~l~ip~gt~~g~~~rl~G 278 (329)
T 3lz8_A 199 LKGQGTPGENGGPNGDLWLVIHIAPHPLFDIVGHNLEIVLPLAPWEAALGAKVTVPTLKESILLTVPPGSQAGQRLRIKG 278 (329)
T ss_dssp ESSCSCCC---CCCCCEEEEECCCCCSSCEEETTEEEEEEEECHHHHHHCEEEEECCSSSCEEEEECTTCCTTCEEEETT
T ss_pred EcccccCCCCCCCCCcEEEEEEEecCCccEEcCCcEEEEEECCHHHHcCCCeEEEECCCCCEEEEECCCCCCCCEEEEcC
Confidence 99999998778889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHHHH
Q 012891 392 KGLAKNGLFLDHGDQYVRFRVNFPTALNERQRAILEEFAE 431 (454)
Q Consensus 392 ~Gmp~~~~~~~rGdL~v~~~V~~P~~ls~~q~~~l~~~~~ 431 (454)
+|||..+ .+|||||+|+|+||++||++|+++|++|++
T Consensus 279 ~GmP~~~---~rGDL~v~~~V~~P~~l~~~q~~~l~~~~~ 315 (329)
T 3lz8_A 279 KGLVSKT---HTGDLFAVIKIVMPTKPDEKARELWQQLAA 315 (329)
T ss_dssp CSCBCSS---CBCCEEEEEEECCCSSCCHHHHHHHHHHHH
T ss_pred CCCCCCC---CCCCEEEEEEEECCCCCCHHHHHHHHHHHh
Confidence 9999762 479999999999999999999999999988
No 2
>1nlt_A Protein YDJ1, mitochondrial protein import protein MAS5; beta-strands, chaperone, heat shock, mitochondrion; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 g.54.1.1
Probab=100.00 E-value=8.7e-57 Score=433.14 Aligned_cols=226 Identities=29% Similarity=0.540 Sum_probs=200.8
Q ss_pred ccCCCCcEEEEEEEeeccccCcceeeeeceeecccCCCCCCccCCCccccCCCccccceEEeC--------CccccCCCC
Q 012891 199 SHFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAKTKICSTCRGIGRVTIP--------PFTSTCSTC 270 (454)
Q Consensus 199 ~~~g~di~~~l~itlee~~~G~~k~v~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~--------~~~~~C~~C 270 (454)
+.+++|++++|.|||+|||+|+++++.+.+.+.|+.|+|+|...+. ..+|+.|+|+|.+... .++.+|+.|
T Consensus 8 ~~~g~d~~~~l~vslee~~~G~~k~i~~~r~~~C~~C~G~G~~~g~-~~~C~~C~G~G~~~~~~~~g~~~~~~~~~C~~C 86 (248)
T 1nlt_A 8 PQRGKDIKHEISASLEELYKGRTAKLALNKQILCKECEGRGGKKGA-VKKCTSCNGQGIKFVTRQMGPMIQRFQTECDVC 86 (248)
T ss_dssp CCBCCCEEEEEEECTTHHHHCEEEEEEEEEEEECTTTTTCSBSTTT-CCCCTTSSSSSCEEEEEESSSEEEEEECSCTTC
T ss_pred CCCCCCEEEEEEecHHHhcCCceEEEEeeEEEeCCCCcCccCCCCC-CccCCCCCCCcEEEEEEecCceEEEEEEcCCCC
Confidence 3578999999999999999999999999999999999999999887 4899999999986421 247799999
Q ss_pred CCceEEe--eeecccccCCceeeceEEEEEEecCccCCCCEEEECCCcCCCCCCCCCccEEEEEEEecCCcccccCCCeE
Q 012891 271 KGLGRII--KDHCMTCKGSGVVDGVKEVKVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVY 348 (454)
Q Consensus 271 ~G~G~~~--~~~C~~C~g~G~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~ 348 (454)
+|+|+++ +++|..|+|.|++.+.++++|.||||+++|++|+|+|+|++++ ++.+|||||+|+++||+.|+|+|+|||
T Consensus 87 ~G~G~~i~~~~~C~~C~G~g~~~~~~~l~V~Ip~G~~~G~~ir~~g~G~~~~-~g~~GDl~v~i~v~~h~~F~R~G~DL~ 165 (248)
T 1nlt_A 87 HGTGDIIDPKDRCKSCNGKKVENERKILEVHVEPGMKDGQRIVFKGEADQAP-DVIPGDVVFIVSERPHKSFKRDGDDLV 165 (248)
T ss_dssp SSSSSCCCTTSBCSSSTTSCEEEEEEEEEEEECTTCCTTCEEEETTCSCCCT-TCBCCCEEEEEEECCCSSCEEETTEEE
T ss_pred CCcCEEeccCCCCcccCCCceEeeeEEEEEEECCCccCCCEEEEeeeecCCC-CCCcceEEEEEEEecCccceeeCCEEE
Confidence 9999999 8999999999999999999999999999999999999999974 668999999999999999999999999
Q ss_pred EEEeeCHHHHhCCCEEEEeCCCCE-EEEEeCCC--CCCCcEEEEcCCCcCCCCCCCCCCcEEEEEEEECCCC--CCHHHH
Q 012891 349 VDSNISFTQAILGGKVDVPTLSGK-VQVKIPKG--VQPGQLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPTA--LNERQR 423 (454)
Q Consensus 349 ~~~~Isl~eAllG~~~~i~tldG~-~~v~ip~~--~~~g~~~~l~g~Gmp~~~~~~~rGdL~v~~~V~~P~~--ls~~q~ 423 (454)
++++|+|.|||+|++++|+||||+ +.|+||++ ++||++++|+|+|||..+.. .+|||||+|+|+||++ ||++|+
T Consensus 166 ~~~~Isl~eAllG~~i~v~tldG~~~~i~ip~g~vt~~g~~~rl~g~Gmp~~~~~-~~GDL~V~~~V~~P~~~~Ls~~q~ 244 (248)
T 1nlt_A 166 YEAEIDLLTAIAGGEFALEHVSGDWLKVGIVPGEVIAPGMRKVIEGKGMPIPKYG-GYGNLIIKFTIKDPENHFTSEENL 244 (248)
T ss_dssp EEEEEEHHHHHHCBCCEEECSSSCEEECCBCTTTTCSTTCEEEETTCSCBCSSSC-SBCCEEEEEEEECCC---------
T ss_pred EEEEeCHHHHhcCCEEEEeCCCCCEEEEEeCCCCeeCCCeEEEEcCCCCccCCCC-CcCCEEEEEEEECCCCCCCCHHHH
Confidence 999999999999999999999996 89999998 99999999999999986443 5799999999999999 999999
Q ss_pred HHHH
Q 012891 424 AILE 427 (454)
Q Consensus 424 ~~l~ 427 (454)
++|+
T Consensus 245 ~~l~ 248 (248)
T 1nlt_A 245 KKLE 248 (248)
T ss_dssp ----
T ss_pred HhhC
Confidence 9985
No 3
>3agx_A DNAJ homolog subfamily B member 1; chaperone; 1.85A {Homo sapiens} PDB: 3agy_A 3agz_A 2qld_A
Probab=100.00 E-value=2.6e-45 Score=336.96 Aligned_cols=177 Identities=28% Similarity=0.490 Sum_probs=157.9
Q ss_pred CCCcEEEEEEEeeccccCcceeeeeceeecccCCCCCCccCCCccccCCCccccceEEeCCccccCCCCCCceEEeeeec
Q 012891 202 APDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHC 281 (454)
Q Consensus 202 g~di~~~l~itlee~~~G~~k~v~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~C 281 (454)
++|++++|.|||+|||+|+++++.+.+ +|
T Consensus 2 ~~d~~~~l~islee~~~G~~k~i~i~~---------------------------------------------------~c 30 (181)
T 3agx_A 2 DPPVTHDLRVSLEEIYSGCTKKMKISH---------------------------------------------------KR 30 (181)
T ss_dssp ----CEEEEECHHHHHHCEEEEEEEEE---------------------------------------------------EE
T ss_pred CCCEEEEEEEEHHHhcCCcEEEEEEec---------------------------------------------------cc
Confidence 468999999999999999999987642 24
Q ss_pred ccccCCceeeceEEEEEEecCccCCCCEEEECCCcCCCCCCCCCccEEEEEEEecCCcccccCCCeEEEEeeCHHHHhCC
Q 012891 282 MTCKGSGVVDGVKEVKVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILG 361 (454)
Q Consensus 282 ~~C~g~G~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~Isl~eAllG 361 (454)
..|+|.|++.+.++++|.||||+++|++|+|+|+|++++ ++.+|||||+|++++|+.|+|+|+||+++++|++.||++|
T Consensus 31 ~~c~G~g~~~~~~~l~V~Ip~G~~~G~~ir~~G~G~~~~-~g~~GDl~v~i~~~~h~~F~R~G~DL~~~~~Isl~eAllG 109 (181)
T 3agx_A 31 LNPDGKSIRNEDKILTIEVKKGWKEGTKITFPKEGDQTS-NNIPADIVFVLKDKPHNIFKRDGSDVIYPARISLREALCG 109 (181)
T ss_dssp ECTTSSCEEEEEEEEEEEECTTCCTTCEEEETTCSCCCS-SSCCCCEEEEEEECCCSSCEEETTEEEEEEEEEHHHHHHC
T ss_pred CCCCCceEEEEeEEEEEEECCCccCCcEEEEeeccccCC-CCCcccEEEEEEEeccccceeeCCcEEEEEEcCHHHHhCC
Confidence 445555556778999999999999999999999999976 6789999999999999999999999999999999999999
Q ss_pred CEEEEeCCCCE-EEEEeCCCCCCCcEEEEcCCCcCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHHH
Q 012891 362 GKVDVPTLSGK-VQVKIPKGVQPGQLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPTALNERQRAILEEFA 430 (454)
Q Consensus 362 ~~~~i~tldG~-~~v~ip~~~~~g~~~~l~g~Gmp~~~~~~~rGdL~v~~~V~~P~~ls~~q~~~l~~~~ 430 (454)
++++|+||||+ +.|++|+++++|++++|+|+|||..+....+|||||+|+|+||++||++|+++|++++
T Consensus 110 ~~i~v~tldG~~~~i~i~~~t~~g~~~rl~g~Gmp~~~~~~~~GDL~V~~~V~~P~~ls~~q~~~l~~~~ 179 (181)
T 3agx_A 110 CTVNVPTLDGRTIPVVFKDVIRPGMRRKVPGEGLPLPKTPEKRGDLIIEFEVIFPERIPQTSRTVLEQVL 179 (181)
T ss_dssp EEEEEECTTSCEEEEEECSCCCTTCEEEETTCSCBCSSSTTSBCCEEEEEEEECCSCCCHHHHHHHHHHS
T ss_pred CEEEeECCCCCEEEEECCCccCCCcEEEECCcCCCcCCCCCCcCCEEEEEEEECCCCCCHHHHHHHHHhc
Confidence 99999999995 8999999999999999999999986443457999999999999999999999999987
No 4
>2q2g_A HSP40 protein, heat shock 40 kDa protein, putative (fragment); malaria, structural genomics, structural genomics consortium, SGC; 1.90A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=3.3e-44 Score=329.49 Aligned_cols=177 Identities=21% Similarity=0.356 Sum_probs=162.4
Q ss_pred CCCCcEEEEEEEeeccccCcceeeeeceeecccCCCCCCccCCCccccCCCccccceEEeCCccccCCCCCCceEEeeee
Q 012891 201 FAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDH 280 (454)
Q Consensus 201 ~g~di~~~l~itlee~~~G~~k~v~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~ 280 (454)
+++|++++|.|||+|||+|+++++.+.+.+.|+.
T Consensus 2 ~g~d~~~~l~islee~~~G~~k~i~~~~~~~c~~---------------------------------------------- 35 (180)
T 2q2g_A 2 APRSHEVPLLVTLEELYLGKRKKIKVTRKRFIEH---------------------------------------------- 35 (180)
T ss_dssp --CEEEEEEEECHHHHHHCEEEEEEEEEEEEETT----------------------------------------------
T ss_pred CCCCEEEEEEeeHHHhcCCcEEEEEEeEEEecCC----------------------------------------------
Confidence 4789999999999999999999999998887731
Q ss_pred cccccCCceeeceEEEEEEecCccCCCCEEEECCCcCCCCCCCCCccEEEEEEEecCCcccccCCCeEEEEeeCHHHHhC
Q 012891 281 CMTCKGSGVVDGVKEVKVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAIL 360 (454)
Q Consensus 281 C~~C~g~G~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~Isl~eAll 360 (454)
|++.+.++++|.||||+++|++|+|+|+|+++.+++.+|||||+|++++|+.|+|+|+||+++++|+|.||++
T Consensus 36 -------g~~~~~~~l~V~Ip~G~~~G~~ir~~g~G~~g~~gg~~GDl~v~i~~~~h~~F~R~G~DL~~~~~Isl~eAll 108 (180)
T 2q2g_A 36 -------KVRNEENIVEVEIKPGWKDGTKLTYSGEGDQESPGTSPGDLVLIIQTKTHPRFTRDDCHLIMKVTIPLVRALT 108 (180)
T ss_dssp -------EEEEEEEEEEEEECTTCCTTCEEEETTCSCCSSTTSCCCEEEEEEEECCCSSCEEETTEEEEEEEEEHHHHHH
T ss_pred -------ceEEeeEEEEEEECCCCcCCcEEEEeeccCCCCCCCccccEEEEEEEEecccEEEcCCEEEEEEEcCHHHHhC
Confidence 3345678999999999999999999999999666889999999999999999999999999999999999999
Q ss_pred CCEEEEeCCCCE-EEEEeCCCCCCCcEEEEcCCCcCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHHH
Q 012891 361 GGKVDVPTLSGK-VQVKIPKGVQPGQLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPTALNERQRAILEEFA 430 (454)
Q Consensus 361 G~~~~i~tldG~-~~v~ip~~~~~g~~~~l~g~Gmp~~~~~~~rGdL~v~~~V~~P~~ls~~q~~~l~~~~ 430 (454)
|++++|+||||+ +.|++|+++++|++++|+|+|||..+.+..+|||||+|+|+||++||++|+++|++++
T Consensus 109 G~~i~v~tldG~~v~i~ip~~t~~g~~~rl~g~Gmp~~~~~~~~GDL~V~~~V~~P~~Ls~~q~~~l~~~~ 179 (180)
T 2q2g_A 109 GFTCPVTTLDNRNLQIPIKEIVNPKTRKIVPNEGMPIKNQPGQKGDLILEFDICFPKSLTPEQKKLIKEAL 179 (180)
T ss_dssp CEEEEEECTTCCEEEEEECSCCCTTCEEEETTCSCBCSSSTTCBCCEEEEEEEECCSCCCHHHHHHHHHHC
T ss_pred CCEEEeeCCCCCEEEEECCCccCCCEEEEECCcCCCcCCCCCCcCCEEEEEEEECCCCCCHHHHHHHHHhc
Confidence 999999999995 8999999999999999999999976444457999999999999999999999999986
No 5
>1c3g_A Heat shock protein 40; beta sheets, short helices, chaperone; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 PDB: 2b26_A
Probab=100.00 E-value=6.2e-42 Score=311.59 Aligned_cols=169 Identities=22% Similarity=0.395 Sum_probs=153.7
Q ss_pred CCcEEEEEEEeeccccCcceeeeeceeecccCCCCCCccCCCccccCCCccccceEEeCCccccCCCCCCceEEeeeecc
Q 012891 203 PDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDHCM 282 (454)
Q Consensus 203 ~di~~~l~itlee~~~G~~k~v~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~C~ 282 (454)
+|++++|.|||+|||+|+++++.+.+.. +
T Consensus 1 ~d~~~~l~islee~~~G~~k~i~~~~~~----~----------------------------------------------- 29 (170)
T 1c3g_A 1 ETVQVNLPVSLEDLFVGKKKSFKIGRKG----P----------------------------------------------- 29 (170)
T ss_dssp CEEEEEEEECHHHHHHTCEEEEEEEEEE----T-----------------------------------------------
T ss_pred CCEEEEEEeEHHHhhCCcEEEEEEEEec----C-----------------------------------------------
Confidence 4789999999999999999999987651 0
Q ss_pred cccCCceeeceEEEEEEecCccCCCCEEEECCCcCCCCCCCCCccEEEEEEEecCCcccccCCCeEEEEeeCHHHHhCCC
Q 012891 283 TCKGSGVVDGVKEVKVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIFSRDGADVYVDSNISFTQAILGG 362 (454)
Q Consensus 283 ~C~g~G~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~g~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~Isl~eAllG~ 362 (454)
.|.+ +.++++|.||||+++|++|+|+|+|+++.+++.+|||||+|++++|+.|+|+|+||+++++|++.||++|+
T Consensus 30 ----~G~~-~~~~l~V~Ip~G~~~G~~ir~~g~G~~~~~gg~~GDl~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAllG~ 104 (170)
T 1c3g_A 30 ----HGAS-EKTQIDIQLKPGWKAGTKITYKNQGDYNPQTGRRKTLQFVIQEKSHPNFKRDGDDLIYTLPLSFKESLLGF 104 (170)
T ss_dssp ----TTEE-EEEEEEEECCTTCCTTCEEEESSCSSBCSSSSCBCEEEEEEEECCCSSEEEETTEEEEEECCBHHHHHHCE
T ss_pred ----CCcE-EeEEEEEEeCCCccCCCEEEEeccccCCCCCCccccEEEEEEEccCCccEEeCCcEeEEEEcCHHHHhCCC
Confidence 1223 56889999999999999999999999777788999999999999999999999999999999999999999
Q ss_pred EEEEeCCCCE-EEEEeCCCCCCCcEEEEcCCCcCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHH
Q 012891 363 KVDVPTLSGK-VQVKIPKGVQPGQLLVLRGKGLAKNGLFLDHGDQYVRFRVNFPTALNERQRAILE 427 (454)
Q Consensus 363 ~~~i~tldG~-~~v~ip~~~~~g~~~~l~g~Gmp~~~~~~~rGdL~v~~~V~~P~~ls~~q~~~l~ 427 (454)
+++|+||||+ +.|++|+++++|++++|+|+|||..+....+|||||+|+|+||++||++|+++|+
T Consensus 105 ~~~v~tldG~~~~i~i~~~t~~g~~~rl~g~G~p~~~~~~~~GDL~V~~~V~~P~~Ls~~q~~~l~ 170 (170)
T 1c3g_A 105 SKTIQTIDGRTLPLSRVQPVQPSQTSTYPGQGMPTPKNPSQRGNLIVKYKVDYPISLNDAQKRAID 170 (170)
T ss_dssp EEEEECSSSCEEEEEESSCCCTTCEEECTTCSCBCSSCTTSBCCEEEEECCBCCSSCCTTHHHHTC
T ss_pred eEEeeCCCCCEEEEECCCccCCCcEEEEeCCCCCcCCCCCCCCCEEEEEEEECCCCCCHHHHHhhC
Confidence 9999999996 8999999999999999999999976444457999999999999999999999874
No 6
>3i38_A Putative chaperone DNAJ; structural genomics, protein structure initiative, midwest center for structural genomics, MCSG; 2.30A {Klebsiella pneumoniae subsp}
Probab=99.94 E-value=3.1e-27 Score=198.68 Aligned_cols=96 Identities=31% Similarity=0.561 Sum_probs=90.3
Q ss_pred ecCCcccccCCCeEEEEeeCHHHHhCCCEEEEeCCCCEEEEEeCCCCCCCcEEEEcCCCcCCCCCCCCCCcEEEEEEEEC
Q 012891 335 ADDPIFSRDGADVYVDSNISFTQAILGGKVDVPTLSGKVQVKIPKGVQPGQLLVLRGKGLAKNGLFLDHGDQYVRFRVNF 414 (454)
Q Consensus 335 ~~h~~f~R~G~DL~~~~~Isl~eAllG~~~~i~tldG~~~v~ip~~~~~g~~~~l~g~Gmp~~~~~~~rGdL~v~~~V~~ 414 (454)
+||+.|+|+|+||+++++|+|.||++|++++|+|+||.++|+||+++++|++++|+|+|||..+ .+|||||+|+|+|
T Consensus 2 kph~~F~R~G~DL~~~~~Isl~eAl~G~~i~v~tldG~~~v~ip~g~~~G~~~rl~G~G~p~~~---~~GDL~v~~~V~~ 78 (109)
T 3i38_A 2 NAHPLFDIVGHNLEIVLPLAPWEAALGAKVTVPTLKESILLTVPPGSQAGQRLRIKGKGLVSKT---HTGDLFAVIKIVM 78 (109)
T ss_dssp --CCCCEEETTEEEEEEEECHHHHHHCEEEEECCSSSCEEEEECTTCCTTCEEEETTCSCBCSS---CBCCEEEEEEECC
T ss_pred CCCCCeEEECCEEEEEEEcCHHHHhCCCEEEEEcCCCCEEEeeCCCcCcCeEEEECCccCCCCC---CCcCEEEEEEEEC
Confidence 6899999999999999999999999999999999999999999999999999999999999843 5899999999999
Q ss_pred CCCCCHHHHHHHHHHHHHh
Q 012891 415 PTALNERQRAILEEFAEEE 433 (454)
Q Consensus 415 P~~ls~~q~~~l~~~~~~~ 433 (454)
|++||++|+++|+++++..
T Consensus 79 P~~Ls~~q~~~l~~l~~~~ 97 (109)
T 3i38_A 79 PTKPDEKARELWQQLAAAE 97 (109)
T ss_dssp CSSCCHHHHHHHHHHHHHT
T ss_pred CCCCCHHHHHHHHHHHhhc
Confidence 9999999999999999874
No 7
>1xao_A YDJ1, mitochondrial protein import protein MAS5; beta sheets, chaperone; 2.07A {Saccharomyces cerevisiae}
Probab=99.91 E-value=1.5e-24 Score=185.90 Aligned_cols=94 Identities=31% Similarity=0.547 Sum_probs=84.7
Q ss_pred cccccCCCeEEEEeeCHHHHhCCCEEEEeCCCCE-EEEEeCCC--CCCCcEEEEcCCCcCCCCCCCCCCcEEEEEEEECC
Q 012891 339 IFSRDGADVYVDSNISFTQAILGGKVDVPTLSGK-VQVKIPKG--VQPGQLLVLRGKGLAKNGLFLDHGDQYVRFRVNFP 415 (454)
Q Consensus 339 ~f~R~G~DL~~~~~Isl~eAllG~~~~i~tldG~-~~v~ip~~--~~~g~~~~l~g~Gmp~~~~~~~rGdL~v~~~V~~P 415 (454)
.|+|+|+||+++++|+|.+|++|++++|+||||+ +.|+||+| +++|++++|+|+|||..+.. .+|||||+|+|+||
T Consensus 1 ~F~R~G~DL~~~~~Isl~eAllG~~i~v~tldG~~~~v~ip~g~v~~~G~~~rl~G~Gmp~~~~~-~~GDL~V~~~V~~P 79 (121)
T 1xao_A 1 SFKRDGDDLVYEAEIDLLTAIAGGEFALEHVSGDWLKVGIVPGEVIAPGMRKVIEGKGMPIPKYG-GYGNLIIKFTIKFP 79 (121)
T ss_dssp CCEEETTEEEEEEEEEHHHHHHCEEEEEECTTSCEEEEEECTTSCCCTTCEEEETTCSCC-------CCCEEEEEEEECC
T ss_pred CceEECCeEEEEEEcCHHHHhCCCEEEEecCCCCEEEEEeCCCCeeCCCcEEEECCCCCCCCCCC-CCCCEEEEEEEECC
Confidence 4899999999999999999999999999999997 89999999 99999999999999986443 57999999999999
Q ss_pred CC--CCHHHHHHHHHHHHHh
Q 012891 416 TA--LNERQRAILEEFAEEE 433 (454)
Q Consensus 416 ~~--ls~~q~~~l~~~~~~~ 433 (454)
+. ||++|+++|++++...
T Consensus 80 ~~~~ls~~q~~~l~~l~~~~ 99 (121)
T 1xao_A 80 ENHFTSEENLKKLEEILPPR 99 (121)
T ss_dssp CTTCSCHHHHHHHHHHSCCC
T ss_pred CCCCCCHHHHHHHHHHcccc
Confidence 99 9999999999999754
No 8
>1bq0_A DNAJ, HSP40; chaperone, heat shock, protein folding, DNAK; NMR {Escherichia coli} SCOP: a.2.3.1 PDB: 1xbl_A 1bqz_A
Probab=99.85 E-value=2.6e-22 Score=167.33 Aligned_cols=73 Identities=49% Similarity=0.802 Sum_probs=68.2
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHhhhhhhhhhhhcccccCCCC
Q 012891 81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSE 153 (454)
Q Consensus 81 ~~~~Y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yd~~~~~g~~ 153 (454)
..|||+||||+++|+.+|||+|||+|+++||||+++.+++++++|++|++||++|+||.+|+.||.++..+..
T Consensus 2 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~~~ 74 (103)
T 1bq0_A 2 KQDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAAYDQYGHAAFE 74 (103)
T ss_dssp CCCSTTTTSSCSSCCHHHHHHHHHHHHTTTCTTTCTTTCTHHHHHHHHTTTTTSTTCSHHHHHTTTSTTTSSC
T ss_pred CCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHCCHHHHHHHHHHhhhhhc
Confidence 4699999999999999999999999999999999987788999999999999999999999999999876544
No 9
>2dn9_A DNAJ homolog subfamily A member 3; J-domain, TID1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.85 E-value=8.2e-22 Score=156.26 Aligned_cols=73 Identities=56% Similarity=0.853 Sum_probs=68.3
Q ss_pred CCCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHhhhhhhhhhhhcccccCC
Q 012891 79 SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRG 151 (454)
Q Consensus 79 ~~~~~~Y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yd~~~~~g 151 (454)
....|||+||||+++|+.+|||+|||+|+++||||++++++++.++|++|++||++|+||.+|..||.++..+
T Consensus 4 ~~~~~~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~~ 76 (79)
T 2dn9_A 4 GSSGDYYQILGVPRNASQKEIKKAYYQLAKKYHPDTNKDDPKAKEKFSQLAEAYEVLSDEVKRKQYDAYGSGP 76 (79)
T ss_dssp SCCSCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCSSCTTHHHHHHHHHHHHHHHHSHHHHHHHHHSCCCC
T ss_pred CCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHhccCcC
Confidence 4467999999999999999999999999999999999887889999999999999999999999999997654
No 10
>1hdj_A Human HSP40, HDJ-1; molecular chaperone; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=99.83 E-value=3.5e-21 Score=151.83 Aligned_cols=71 Identities=45% Similarity=0.776 Sum_probs=65.8
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHhhhhhhhhhhhcccccCCC
Q 012891 81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGS 152 (454)
Q Consensus 81 ~~~~Y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yd~~~~~g~ 152 (454)
..|||+||||+++|+.+|||+|||+|++++|||++++ +.+.+.|+.|++||++|+||.+|..||.++..+.
T Consensus 2 ~~~~y~iLgv~~~as~~~Ik~ayr~l~~~~HPD~~~~-~~~~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~ 72 (77)
T 1hdj_A 2 GKDYYQTLGLARGASDEEIKRAYRRQALRYHPDKNKE-PGAEEKFKEIAEAYDVLSDPRKREIFDRYGEEGL 72 (77)
T ss_dssp CCCSHHHHTCCTTCCHHHHHHHHHHHHHTTCTTTCCC-TTHHHHHHHHHHHHHHTTCHHHHHHHHHTCGGGC
T ss_pred CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC-ccHHHHHHHHHHHHHHHCCHHHHHHHHHHccccc
Confidence 4699999999999999999999999999999999974 6788999999999999999999999999976543
No 11
>2ej7_A HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.83 E-value=5.4e-21 Score=152.61 Aligned_cols=73 Identities=47% Similarity=0.734 Sum_probs=66.6
Q ss_pred CCCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCh-hHHHHHHHHHHHHHhhhhhhhhhhhcccccCC
Q 012891 79 SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNP-SAKRKFQEIRDAYETLRDSEKRAQYDRRRSRG 151 (454)
Q Consensus 79 ~~~~~~Y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~-~a~~~f~~i~~Ay~vL~d~~~r~~yd~~~~~g 151 (454)
+...|||+||||+++|+.+|||+|||+|+++||||+++... .+.++|++|++||++|+||.+|..||.++..+
T Consensus 6 ~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~~ 79 (82)
T 2ej7_A 6 SGMVDYYEVLDVPRQASSEAIKKAYRKLALKWHPDKNPENKEEAERRFKQVAEAYEVLSDAKKRDIYDRYGSGP 79 (82)
T ss_dssp SSSCCHHHHTTCCTTCCHHHHHHHHHHHHTTSCTTTCSTTHHHHHHHHHHHHHHHHHHSSTTHHHHHHHTCCCS
T ss_pred CCCcCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHHCCHHHHHHHHHcCccc
Confidence 34579999999999999999999999999999999998653 67889999999999999999999999997654
No 12
>2ctr_A DNAJ homolog subfamily B member 9; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.83 E-value=4.6e-21 Score=155.12 Aligned_cols=72 Identities=51% Similarity=0.858 Sum_probs=66.7
Q ss_pred CCCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHhhhhhhhhhhhcccccCC
Q 012891 79 SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRG 151 (454)
Q Consensus 79 ~~~~~~Y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yd~~~~~g 151 (454)
....|||+||||+++|+.+|||+|||+|+++||||+++ ++.+.++|++|++||++|+||.+|..||.++..+
T Consensus 4 ~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~-~~~a~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~ 75 (88)
T 2ctr_A 4 GSSGSYYDILGVPKSASERQIKKAFHKLAMKYHPDKNK-SPDAEAKFREIAEAYETLSDANRRKEYDTLGHSA 75 (88)
T ss_dssp CCCCSHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCC-SHHHHHHHHHHHHHHHHHHSSHHHHHHHHTCHHH
T ss_pred CCCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCC-ChHHHHHHHHHHHHHHHHCCHHHHHHHHHhCccc
Confidence 34579999999999999999999999999999999998 5788999999999999999999999999987543
No 13
>2ctp_A DNAJ homolog subfamily B member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.83 E-value=5.8e-21 Score=150.96 Aligned_cols=72 Identities=44% Similarity=0.713 Sum_probs=66.6
Q ss_pred CCCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHhhhhhhhhhhhcccccCC
Q 012891 79 SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRG 151 (454)
Q Consensus 79 ~~~~~~Y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yd~~~~~g 151 (454)
....|||+||||+++|+.+|||+|||+|++++|||+++ .+.+.++|++|++||++|+||.+|..||.++..+
T Consensus 4 ~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~-~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~ 75 (78)
T 2ctp_A 4 GSSGDYYEILGVSRGASDEDLKKAYRRLALKFHPDKNH-APGATEAFKAIGTAYAVLSNPEKRKQYDQFGSGP 75 (78)
T ss_dssp SCSCCHHHHHTCCTTCCHHHHHHHHHHHHTTSCTTTCS-SHHHHHHHHHHHHHHHHHTSHHHHHHHHHTCSCS
T ss_pred CCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCC-CccHHHHHHHHHHHHHHHCCHHHHHHHHHcCccc
Confidence 34579999999999999999999999999999999997 4788999999999999999999999999997654
No 14
>2yua_A Williams-beuren syndrome chromosome region 18 protein; J domain, all helix protein, chaperone, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.83 E-value=4e-21 Score=158.90 Aligned_cols=72 Identities=39% Similarity=0.638 Sum_probs=67.5
Q ss_pred CCCCCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHhhhhhhhhhhhcccc
Q 012891 77 CYSSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRR 148 (454)
Q Consensus 77 ~~~~~~~~Y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yd~~~ 148 (454)
..++..|||+||||+++|+.+|||+|||+|+++||||++++++++.++|++|++||+||+||.+|..||...
T Consensus 12 ~~~~~~~~Y~vLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~l 83 (99)
T 2yua_A 12 CSYSRTALYDLLGVPSTATQAQIKAAYYRQCFLYHPDRNSGSAEAAERFTRISQAYVVLGSATLRRKYDRGL 83 (99)
T ss_dssp CSSCSSHHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCSSCSHHHHHHHHHHHHHHHTTSHHHHHHHHHTC
T ss_pred CCCCccCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHhc
Confidence 346678999999999999999999999999999999999888889999999999999999999999999963
No 15
>2dmx_A DNAJ homolog subfamily B member 8; DNAJ J domain, helix-turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.82 E-value=1.3e-20 Score=153.81 Aligned_cols=74 Identities=45% Similarity=0.710 Sum_probs=67.1
Q ss_pred CCCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCC-hhHHHHHHHHHHHHHhhhhhhhhhhhcccccCCC
Q 012891 79 SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNN-PSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGS 152 (454)
Q Consensus 79 ~~~~~~Y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~-~~a~~~f~~i~~Ay~vL~d~~~r~~yd~~~~~g~ 152 (454)
....|||+||||+++|+.+|||+|||+|+++||||+++.. +.++++|++|++||++|+||.+|+.||.++..+.
T Consensus 6 ~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~ 80 (92)
T 2dmx_A 6 SGMANYYEVLGVQASASPEDIKKAYRKLALRWHPDKNPDNKEEAEKKFKLVSEAYEVLSDSKKRSLYDRAGCDSW 80 (92)
T ss_dssp CCCCCHHHHHTCCTTCCTTHHHHHHHHHHHHTCTTTCSSCSHHHHHHHHHHHHHHHHHHSHHHHHHHHHHCSCSS
T ss_pred CCCcCHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCccHHHHHHHHHHHHHHHHHHCCHHHHHHHHHhCcccc
Confidence 3457999999999999999999999999999999999865 3688999999999999999999999999976543
No 16
>2ctq_A DNAJ homolog subfamily C member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.82 E-value=9.2e-21 Score=160.24 Aligned_cols=73 Identities=37% Similarity=0.574 Sum_probs=68.6
Q ss_pred CCCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHhhhhhhhhhhhcccccCC
Q 012891 79 SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRG 151 (454)
Q Consensus 79 ~~~~~~Y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yd~~~~~g 151 (454)
+...|||+||||+++|+.+|||+|||+|+++||||++++++++.++|++|++||+||+||.+|+.||+++..+
T Consensus 17 ~~~~d~Y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~~ 89 (112)
T 2ctq_A 17 EDTEDYYTLLGCDELSSVEQILAEFKVRALECHPDKHPENPKAVETFQKLQKAKEILTNEESRARYDHWRRSQ 89 (112)
T ss_dssp CCCCCHHHHTTCCTTSCHHHHHHHHHHHHHTTCTTTCTTCSTHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHT
T ss_pred cCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHCCHHHHHHHHHhhhhc
Confidence 4568999999999999999999999999999999999977889999999999999999999999999997654
No 17
>2cug_A Mkiaa0962 protein; DNAJ-like domain, structural genomics, molecular chaperone, NPPSFA; NMR {Mus musculus}
Probab=99.82 E-value=1.5e-20 Score=151.99 Aligned_cols=71 Identities=48% Similarity=0.792 Sum_probs=65.9
Q ss_pred CCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHhhhhhhhhhhhcccccCC
Q 012891 80 SKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRG 151 (454)
Q Consensus 80 ~~~~~Y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yd~~~~~g 151 (454)
...|||+||||+++|+.+|||+|||+|+++||||++++ +.++++|++|++||++|+||.+|..||.++..+
T Consensus 15 ~~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~-~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~~ 85 (88)
T 2cug_A 15 LDFDPYRVLGVSRTASQADIKKAYKKLAREWHPDKNKD-PGAEDRFIQISKAYEILSNEEKRTNYDHYGSGP 85 (88)
T ss_dssp SSSCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCCS-TTHHHHHHHHHHHHHHHHSHHHHHHHHHHTTCC
T ss_pred CCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCC-hhHHHHHHHHHHHHHHHCCHHHHHHHHHcCCCC
Confidence 45799999999999999999999999999999999985 678899999999999999999999999996543
No 18
>2ctw_A DNAJ homolog subfamily C member 5; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.81 E-value=1.7e-20 Score=157.82 Aligned_cols=73 Identities=45% Similarity=0.735 Sum_probs=68.2
Q ss_pred CCCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHhhhhhhhhhhhcccccCC
Q 012891 79 SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRG 151 (454)
Q Consensus 79 ~~~~~~Y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yd~~~~~g 151 (454)
....+||+||||+++|+.+|||+|||+|++++|||++++++++.++|++|++||++|+||.+|+.||.++..+
T Consensus 14 ~~~~~~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~g~~~ 86 (109)
T 2ctw_A 14 TSGESLYHVLGLDKNATSDDIKKSYRKLALKYHPDKNPDNPEAADKFKEINNAHAILTDATKRNIYDKYGSLG 86 (109)
T ss_dssp SCSCCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTSTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHTCHHH
T ss_pred CCCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHcCHHHHHHHHHhcccc
Confidence 4568999999999999999999999999999999999988889999999999999999999999999986543
No 19
>2och_A Hypothetical protein DNJ-12; HSP40, J-domain, chaperone, APC90013.2, structural genomics, protein structure initiative; 1.86A {Caenorhabditis elegans} PDB: 2lo1_A
Probab=99.81 E-value=2.4e-20 Score=145.52 Aligned_cols=68 Identities=38% Similarity=0.702 Sum_probs=61.9
Q ss_pred CCCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHhhhhhhhhhhhccccc
Q 012891 79 SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRS 149 (454)
Q Consensus 79 ~~~~~~Y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yd~~~~ 149 (454)
....|||+||||+++|+.+|||+||++|++++|||++++. .++|++|++||++|+||.+|+.||++|.
T Consensus 5 ~~~~~~y~iLgl~~~a~~~eIk~ayr~l~~~~HPD~~~~~---~~~f~~i~~Ay~~L~d~~~R~~YD~~g~ 72 (73)
T 2och_A 5 VKETGYYDVLGVKPDASDNELKKAYRKMALKFHPDKNPDG---AEQFKQISQAYEVLSDEKKRQIYDQGGE 72 (73)
T ss_dssp -CCCCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCTTC---HHHHHHHHHHHHHHTSHHHHHHHHHTC-
T ss_pred cCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCcCH---HHHHHHHHHHHHHHCCHHHHHHHHhcCC
Confidence 3457999999999999999999999999999999999753 5799999999999999999999999864
No 20
>2lgw_A DNAJ homolog subfamily B member 2; J domain, HSJ1A, CO-chaperon, chaperone; NMR {Homo sapiens}
Probab=99.80 E-value=3.4e-20 Score=153.08 Aligned_cols=72 Identities=47% Similarity=0.738 Sum_probs=64.6
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCC-hhHHHHHHHHHHHHHhhhhhhhhhhhcccccCCCC
Q 012891 82 RDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNN-PSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSE 153 (454)
Q Consensus 82 ~~~Y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~-~~a~~~f~~i~~Ay~vL~d~~~r~~yd~~~~~g~~ 153 (454)
.|||+||||+++|+.+|||+|||+|+++||||+++.. +.+.++|++|++||++|+||.+|+.||.++..+..
T Consensus 2 ~d~Y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~~a~~~f~~I~~AY~vL~d~~~R~~YD~~g~~~~~ 74 (99)
T 2lgw_A 2 ASYYEILDVPRSASADDIKKAYRRKALQWHPDKNPDNKEFAEKKFKEVAEAYEVLSDKHKREIYDRYGREGLT 74 (99)
T ss_dssp CCHHHHSSSCTTSCHHHHHHHHHHHHHHTSTTTCCSCCHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHC---
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCccHHHHHHHHHHHHHHHHHHCCHHHHHHHHHhCccccc
Confidence 5899999999999999999999999999999999865 35889999999999999999999999999766543
No 21
>1wjz_A 1700030A21RIK protein; J-domain, DNAJ like protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, chaperone; NMR {Mus musculus} SCOP: a.2.3.1
Probab=99.80 E-value=3.3e-20 Score=151.88 Aligned_cols=71 Identities=32% Similarity=0.597 Sum_probs=65.0
Q ss_pred CCCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCC------hhHHHHHHHHHHHHHhhhhhhhhhhhccccc
Q 012891 79 SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNN------PSAKRKFQEIRDAYETLRDSEKRAQYDRRRS 149 (454)
Q Consensus 79 ~~~~~~Y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~------~~a~~~f~~i~~Ay~vL~d~~~r~~yd~~~~ 149 (454)
+...|||+||||+++|+.+|||+|||+|+++||||+++.+ +.+.++|++|++||+||+||.+|+.||....
T Consensus 13 ~~~~~~y~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~l~ 89 (94)
T 1wjz_A 13 TLKKDWYSILGADPSANMSDLKQKYQKLILLYHPDKQSADVPAGTMEECMQKFIEIDQAWKILGNEETKKKYDLQRS 89 (94)
T ss_dssp SSCSCHHHHTTCCTTCCHHHHHHHHHHTTSSSCSTTCCTTCCHHHHHHHHHHHHHHHHHHHHHSSSSHHHHHHHHSC
T ss_pred CCCCChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCChhhhHHHHHHHHHHHHHHHHHCCHHHHHHHHHHcc
Confidence 4568999999999999999999999999999999998743 4578999999999999999999999999853
No 22
>2o37_A Protein SIS1; HSP40, J-domain, cochaperone, APC90055.5, structural genomics, PSI-2, protein structure initiative; 1.25A {Saccharomyces cerevisiae}
Probab=99.80 E-value=3.1e-20 Score=151.50 Aligned_cols=70 Identities=37% Similarity=0.663 Sum_probs=64.0
Q ss_pred CCCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHhhhhhhhhhhhcccccCC
Q 012891 79 SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRG 151 (454)
Q Consensus 79 ~~~~~~Y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yd~~~~~g 151 (454)
....|||+||||+++|+.+|||+|||+|+++||||+++.+ .++|++|++||++|+||.+|+.||.++..+
T Consensus 5 ~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~---~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~ 74 (92)
T 2o37_A 5 VKETKLYDLLGVSPSANEQELKKGYRKAALKYHPDKPTGD---TEKFKEISEAFEILNDPQKREIYDQYGLEA 74 (92)
T ss_dssp CSCCHHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTSTTCC---HHHHHHHHHHHHHHTSHHHHHHHHHHCHHH
T ss_pred ccCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCh---HHHHHHHHHHHHHHCCHHHHHHHHHHCHHH
Confidence 3567999999999999999999999999999999999764 469999999999999999999999997544
No 23
>2ctt_A DNAJ homolog subfamily A member 3; ZING finger, beta-hairpin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.77 E-value=3.1e-20 Score=154.97 Aligned_cols=99 Identities=32% Similarity=0.658 Sum_probs=89.2
Q ss_pred CCCcEEEEEEEeeccccCcceeeeeceeecccCCCCCCccCCCccccCCCccccceEEeC--C--ccccCCCCCCceEEe
Q 012891 202 APDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAKTKICSTCRGIGRVTIP--P--FTSTCSTCKGLGRII 277 (454)
Q Consensus 202 g~di~~~l~itlee~~~G~~k~v~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~--~--~~~~C~~C~G~G~~~ 277 (454)
|.|+.++|.|+|+|||+|+++++.+.+.+.|+.|+|+|...+....+|+.|+|+|.+.+. + +..+|+.|+|+|+++
T Consensus 1 ~~~~~~~l~vslee~~~G~~~~i~~~~~~~C~~C~G~G~~~g~~~~~C~~C~G~G~~~~~~G~~~~~~~C~~C~G~G~~i 80 (104)
T 2ctt_A 1 GSSGSSGMELTFNQAAKGVNKEFTVNIMDTCERCNGKGNEPGTKVQHCHYCGGSGMETINTGPFVMRSTCRRCGGRGSII 80 (104)
T ss_dssp CCCCCCCCCCCCSSCCSSSCTTCCSSCCEECSSSSSSSSCTTCCCEECSSSSSSCEEEEEETTEEEEEECSSSSSSSEEC
T ss_pred CCceEEEEEEEHHHHcCCCEEEEEeeeeeECCCCcCCccCCCCCCccCCCCCCCEEEEEEeCCEEEEEECCcCCCcceEC
Confidence 467888999999999999999999999999999999999988888999999999987542 2 367899999999999
Q ss_pred eeecccccCCceeeceEEEEEEe
Q 012891 278 KDHCMTCKGSGVVDGVKEVKVTI 300 (454)
Q Consensus 278 ~~~C~~C~g~G~~~~~~~~~V~I 300 (454)
+++|..|+|.|++.+.++|+|++
T Consensus 81 ~~~C~~C~G~G~v~~~k~l~V~~ 103 (104)
T 2ctt_A 81 ISPCVVCRGAGQAKQKKRSGPSS 103 (104)
T ss_dssp SSCCSSSSSCSEECCCCSSCCSC
T ss_pred CCcCCCCCCeeEEEEEEEEEEEc
Confidence 99999999999999888877754
No 24
>2qsa_A DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, structural genomics, PSI-2, Pro structure initiative; 1.68A {Caenorhabditis elegans}
Probab=99.75 E-value=3.8e-19 Score=149.58 Aligned_cols=70 Identities=34% Similarity=0.576 Sum_probs=64.6
Q ss_pred CCCCcccccCCCCCC-CHHHHHHHHHHHHHHhCCCCCCC---ChhHHHHHHHHHHHHHhhhhhhhhhhhccccc
Q 012891 80 SKRDPYELLGVPENA-SQDEIKKAFHMLAKQYHPDANKN---NPSAKRKFQEIRDAYETLRDSEKRAQYDRRRS 149 (454)
Q Consensus 80 ~~~~~Y~iLgv~~~a-~~~eIk~ayr~la~~~HPD~~~~---~~~a~~~f~~i~~Ay~vL~d~~~r~~yd~~~~ 149 (454)
...|||+||||+++| +.+|||+|||+|++++|||++++ .+.+.++|++|++||++|+||.+|+.||.++.
T Consensus 13 ~~~~~y~iLgv~~~a~s~~eIk~aYr~l~~~~HPDk~~~~~~~~~a~~~f~~i~~AY~~L~d~~~R~~YD~~~~ 86 (109)
T 2qsa_A 13 GLENCYDVLEVNREEFDKQKLAKAYRALARKHHPDRVKNKEEKLLAEERFRVIATAYETLKDDEAKTNYDYYLD 86 (109)
T ss_dssp TTSCHHHHTTCCGGGCCHHHHHHHHHHHHHHTCGGGCCSHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHH
T ss_pred CCCCHHHHcCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccccHHHHHHHHHHHHHHHHHCCHHHHHHHHHhcc
Confidence 457999999999999 99999999999999999999975 35688999999999999999999999999853
No 25
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=99.74 E-value=1.4e-18 Score=162.39 Aligned_cols=72 Identities=46% Similarity=0.760 Sum_probs=67.7
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHhhhhhhhhhhhcccccCCCC
Q 012891 82 RDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSE 153 (454)
Q Consensus 82 ~~~Y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yd~~~~~g~~ 153 (454)
.|||+||||+++|+.+|||+|||+|+++||||++++++++.++|++|++||++|+||.+|+.||++|..+..
T Consensus 2 ~~~y~~l~~~~~a~~~~ik~ay~~l~~~~HPD~~~~~~~~~~~f~~i~~Ay~~L~~~~~r~~yd~~~~~~~~ 73 (210)
T 3apq_A 2 QNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRKKYDKYGEKGLE 73 (210)
T ss_dssp CCHHHHHTCCTTCCHHHHHHHHHHHHHHHCGGGCTTCTTHHHHHHHHHHHHHHHTSHHHHHHHHHHTTTTCC
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHhCCHHHHHHHHHhcccccc
Confidence 589999999999999999999999999999999988888999999999999999999999999999766543
No 26
>2ys8_A RAB-related GTP-binding protein RABJ; DNAJ domain, RAS-associated protein RAP1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.73 E-value=2.9e-18 Score=139.12 Aligned_cols=62 Identities=32% Similarity=0.552 Sum_probs=57.9
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHhhhhhhhhhh
Q 012891 81 KRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQ 143 (454)
Q Consensus 81 ~~~~Y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~ 143 (454)
..|||+||||+++|+.+|||+|||+|+++||||+++. +.+.++|++|++||++|+||.+|+.
T Consensus 26 ~~~~y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~-~~~~~~f~~i~~Ay~~L~d~~~R~~ 87 (90)
T 2ys8_A 26 SKDSWDMLGVKPGASRDEVNKAYRKLAVLLHPDKCVA-PGSEDAFKAVVNARTALLKNIKSGP 87 (90)
T ss_dssp CSSHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTTCCC-TTHHHHHHHHHHHHHHHHHHHCCSC
T ss_pred CCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCC-ccHHHHHHHHHHHHHHHCCcccccC
Confidence 4799999999999999999999999999999999974 6788999999999999999998864
No 27
>2l6l_A DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, J-domain, chaperone; NMR {Homo sapiens}
Probab=99.72 E-value=2.9e-18 Score=153.24 Aligned_cols=70 Identities=31% Similarity=0.588 Sum_probs=64.2
Q ss_pred CCCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCh------hHHHHHHHHHHHHHhhhhhhhhhhhcccc
Q 012891 79 SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNP------SAKRKFQEIRDAYETLRDSEKRAQYDRRR 148 (454)
Q Consensus 79 ~~~~~~Y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~------~a~~~f~~i~~Ay~vL~d~~~r~~yd~~~ 148 (454)
+...|||+||||+++|+.++||+|||+|++++|||+++..+ .|.++|++|++||++|+||.+|+.||..+
T Consensus 7 ~~~~~~y~iLgv~~~a~~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~a~~~f~~i~~Ay~~L~dp~~R~~Yd~~~ 82 (155)
T 2l6l_A 7 MPKKDWYSILGADPSANISDLKQKYQKLILMYHPDKQSTDVPAGTVEECVQKFIEIDQAWKILGNEETKREYDLQR 82 (155)
T ss_dssp CCCSHHHHHHTCCTTCCHHHHHHHHHHHHHHHSCCCCCCCCTTHHHHHHHHHHHHHHHHHHHSSSHHHHCHHHHHH
T ss_pred CCCCChhHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCchhHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHc
Confidence 45679999999999999999999999999999999998653 36789999999999999999999999874
No 28
>1iur_A KIAA0730 protein; DNAJ like domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=99.71 E-value=3.1e-18 Score=137.95 Aligned_cols=68 Identities=21% Similarity=0.238 Sum_probs=60.6
Q ss_pred CCCCCCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCh-hHHHHHHHHHHHHHhhhhhhhhhh
Q 012891 76 SCYSSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNP-SAKRKFQEIRDAYETLRDSEKRAQ 143 (454)
Q Consensus 76 ~~~~~~~~~Y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~-~a~~~f~~i~~Ay~vL~d~~~r~~ 143 (454)
+......++|+||||+++|+.+|||+|||+||++||||++++++ .++++|++|++||++|+|...|..
T Consensus 10 ~~~~~~~~~y~vLgv~~~as~~eIKkaYrkla~~~HPDk~~~~~~~a~~~F~~I~~AYevL~~~~~r~~ 78 (88)
T 1iur_A 10 PRGSILKEVTSVVEQAWKLPESERKKIIRRLYLKWHPDKNPENHDIANEVFKHLQNEINRLEKQAFLDQ 78 (88)
T ss_dssp CSSSCHHHHHHHHHHTTSSCSHHHHHHHHHHHHHTCTTTSSSCHHHHHHHHHHHHHHHHHHHHHTTCSS
T ss_pred CCCccHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHCCCCCCCchHHHHHHHHHHHHHHHHHHhhccccc
Confidence 34456689999999999999999999999999999999998763 588999999999999999987743
No 29
>3bvo_A CO-chaperone protein HSCB, mitochondrial precurso; structural genomics medical relev protein structure initiative, PSI-2; 3.00A {Homo sapiens}
Probab=99.71 E-value=8.9e-18 Score=156.55 Aligned_cols=100 Identities=19% Similarity=0.368 Sum_probs=73.5
Q ss_pred ccccccccccccccccCCCCCchhhhhhhhcccCCCCCCCCCcccccCCCCC--CCHHHHHHHHHHHHHHhCCCCCCCCh
Q 012891 42 HKRGLYYCSSVTGTLADFGTTGMFLARRCIHATGSCYSSKRDPYELLGVPEN--ASQDEIKKAFHMLAKQYHPDANKNNP 119 (454)
Q Consensus 42 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~iLgv~~~--a~~~eIk~ayr~la~~~HPD~~~~~~ 119 (454)
....||+|...... .....+++..+...+. .....|||+||||+++ ++.++||+|||+|+++||||++++.+
T Consensus 9 ~~~~Cw~C~~~~~~----~~~~~~fC~~c~~~q~--~~~~~d~y~lLgv~~~~~a~~~eIk~aYr~L~~~~HPDk~~~~~ 82 (207)
T 3bvo_A 9 NYPRCWNCGGPWGP----GREDRFFCPQCRALQA--PDPTRDYFSLMDCNRSFRVDTAKLQHRYQQLQRLVHPDFFSQRS 82 (207)
T ss_dssp --CBCSSSCCBCCS----SCSCCCBCTTTCCBCC--CCTTCCHHHHTTSCSCSCCCHHHHHHHHHHHHHHHCGGGGTTSC
T ss_pred CCCCCCCCCCCccc----ccccccccccccccCC--CCCCCCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCC
Confidence 34568999763100 0122233333333322 2345799999999986 79999999999999999999998654
Q ss_pred h-----HHHHHHHHHHHHHhhhhhhhhhhhccc
Q 012891 120 S-----AKRKFQEIRDAYETLRDSEKRAQYDRR 147 (454)
Q Consensus 120 ~-----a~~~f~~i~~Ay~vL~d~~~r~~yd~~ 147 (454)
+ |.++|++|++||+||+||.+|+.||..
T Consensus 83 ~~e~~~a~~~f~~In~AY~vLsdp~~R~~Yd~~ 115 (207)
T 3bvo_A 83 QTEKDFSEKHSTLVNDAYKTLLAPLSRGLYLLK 115 (207)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
Confidence 3 567899999999999999999999975
No 30
>1gh6_A Large T antigen; tumor suppressor, oncoprotein, antitumor protein; 3.20A {Simian virus 40} SCOP: a.2.3.1
Probab=99.69 E-value=3.1e-18 Score=144.60 Aligned_cols=65 Identities=23% Similarity=0.390 Sum_probs=60.4
Q ss_pred CCCcccccCCCCCCCH--HHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHhhhhhhhhhhhccccc
Q 012891 81 KRDPYELLGVPENASQ--DEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRS 149 (454)
Q Consensus 81 ~~~~Y~iLgv~~~a~~--~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yd~~~~ 149 (454)
..+||+||||+++|+. +|||+|||+||+++|||++++ .++|++|++||+||+||.+|+.||.++.
T Consensus 7 ~~~~Y~iLgv~~~as~~~~eIk~aYr~la~~~HPDk~~~----~e~f~~I~~AYevL~d~~~R~~~~~~~~ 73 (114)
T 1gh6_A 7 SLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGD----EEKMKKMNTLYKKMEDGVKYAHQPDFGG 73 (114)
T ss_dssp HHHHHHHTTCCTTSCSCHHHHHHHHHHTTTTCCTTTCCT----TTTTHHHHHHHHHHHHHHHSCCSSCCSC
T ss_pred hhhHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCCCCCcc----HHHHHHHHHHHHHHCCHHHHHHhhhccc
Confidence 3689999999999999 999999999999999999875 4799999999999999999999998764
No 31
>1faf_A Large T antigen; J domain, HPD motif, anti-parallel hairpin of helices, viral protein; NMR {Murine polyomavirus} SCOP: a.2.3.1
Probab=99.69 E-value=1.6e-17 Score=131.30 Aligned_cols=62 Identities=18% Similarity=0.306 Sum_probs=56.4
Q ss_pred CCcccccCCCCC--CCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHhhhhhhhhhhhcccc
Q 012891 82 RDPYELLGVPEN--ASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRR 148 (454)
Q Consensus 82 ~~~Y~iLgv~~~--a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yd~~~ 148 (454)
.++|+||||+++ ++.+|||+|||+||+++|||++++ .++|++|++||++|+|+.+|..+ .+|
T Consensus 11 ~~~y~iLgl~~~~~a~~~eIk~aYr~la~~~HPDk~~~----~~~f~~i~~AYe~L~~~~~r~~~-~~g 74 (79)
T 1faf_A 11 ERLLELLKLPRQLWGDFGRMQQAYKQQSLLLHPDKGGS----HALMQELNSLWGTFKTEVYNLRM-NLG 74 (79)
T ss_dssp HHHHHHHTCCSSSTTCHHHHHHHHHHHHHHSSGGGSCC----HHHHHHHHHHHHHHHHHHHHHTT-CCS
T ss_pred HHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCC----HHHHHHHHHHHHHHhhHHHHHHH-hcC
Confidence 589999999999 999999999999999999999863 57999999999999999999884 453
No 32
>3hho_A CO-chaperone protein HSCB homolog; structural genomics, IDP01304, center for structural genomics of infectious diseases, CSGI; 2.15A {Vibrio cholerae}
Probab=99.68 E-value=2.3e-17 Score=150.02 Aligned_cols=68 Identities=31% Similarity=0.515 Sum_probs=62.2
Q ss_pred CCCcccccCCCCCCC--HHHHHHHHHHHHHHhCCCCCCCChh-----HHHHHHHHHHHHHhhhhhhhhhhhcccc
Q 012891 81 KRDPYELLGVPENAS--QDEIKKAFHMLAKQYHPDANKNNPS-----AKRKFQEIRDAYETLRDSEKRAQYDRRR 148 (454)
Q Consensus 81 ~~~~Y~iLgv~~~a~--~~eIk~ayr~la~~~HPD~~~~~~~-----a~~~f~~i~~Ay~vL~d~~~r~~yd~~~ 148 (454)
.+|||+||||+++++ .++||+|||+|+++||||++++.+. +.++|+.|++||+||+||.+|+.||...
T Consensus 3 ~~d~Y~iLgl~~~a~id~~eIk~aYr~l~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vL~dp~~R~~Yd~~l 77 (174)
T 3hho_A 3 AMNYFELFGLPIQFELDGSLLSSQFRALQKRFHPDNFATASERDRLMAVQQAAQINDAYQTLKDPLRRAEYLLSL 77 (174)
T ss_dssp -CCHHHHTTCCSSSCCCHHHHHHHHHHHHHHHCGGGSTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHH
T ss_pred CCCHHHHcCcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCcHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHc
Confidence 479999999999988 9999999999999999999987654 6689999999999999999999999864
No 33
>2pf4_E Small T antigen; PP2A, SV40, DNAJ, aalpha subunit, hydrolase regulat protein complex; 3.10A {Simian virus 40} PDB: 2pkg_C
Probab=99.67 E-value=8.5e-18 Score=151.52 Aligned_cols=65 Identities=23% Similarity=0.386 Sum_probs=57.8
Q ss_pred CCCcccccCCCCCCC--HHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHhhhhhhhhhhhccccc
Q 012891 81 KRDPYELLGVPENAS--QDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRS 149 (454)
Q Consensus 81 ~~~~Y~iLgv~~~a~--~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yd~~~~ 149 (454)
..|||+||||+++|+ .+|||+|||+||+++|||++++ +++|++|++||++|+||.+|+.||++|.
T Consensus 10 ~~d~Y~vLGl~~~as~~~~eIKkAYRkLa~~~HPDk~~~----~e~F~~I~~AYevLsdp~kR~~YD~~G~ 76 (174)
T 2pf4_E 10 SLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGD----EEKMKKMNTLYKKMEDGVKYAHQPDFGG 76 (174)
T ss_dssp HHHHHHTTTCCGGGTTCHHHHHHHHHHHGGGCSCC---C----CTTTTHHHHHHHHHHHHHHHHTSCGGGG
T ss_pred cccHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCcCCCCC----HHHHHHHHHHHHHhCCHHHHHHHhccCC
Confidence 369999999999998 6999999999999999999875 3789999999999999999999999975
No 34
>1n4c_A Auxilin; four helix bundle, protein binding; NMR {Bos taurus} SCOP: a.2.3.1 PDB: 1xi5_J
Probab=99.66 E-value=3.9e-17 Score=148.06 Aligned_cols=66 Identities=21% Similarity=0.447 Sum_probs=60.6
Q ss_pred CCCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChh---HHHHHHHHHHHHHhhhhhhhhhhh
Q 012891 79 SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPS---AKRKFQEIRDAYETLRDSEKRAQY 144 (454)
Q Consensus 79 ~~~~~~Y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~---a~~~f~~i~~Ay~vL~d~~~r~~y 144 (454)
+...|||+||||+++|+.+|||+|||+|+++||||++++.+. |+++|++|++||+||+||.+|+.|
T Consensus 114 ~~~~d~Y~vLgv~~~As~~eIKkAYRklal~~HPDK~~~~~~e~~A~~~F~~I~eAYevLsD~~kR~~Y 182 (182)
T 1n4c_A 114 WAGETKWKPVGMADLVTPEQVKKVYRKAVLVVHPDKATGQPYEQYAKMIFMELNDAWSEFENQGQKPLY 182 (182)
T ss_dssp CTTCCCCCCCCGGGGSSHHHHHHHHHHHHHHTCGGGGSSCTTHHHHHHHHHHHHHHHHHHHHHHSSCCC
T ss_pred cCccchhhcCCCCCCCCHHHHHHHHHHHHHHHCcCcCCCcchHHHHHHHHHHHHHHHHHHCCHHhhhhC
Confidence 344799999999999999999999999999999999986553 789999999999999999999987
No 35
>1fpo_A HSC20, chaperone protein HSCB; molecular chaperone; 1.80A {Escherichia coli} SCOP: a.2.3.1 a.23.1.1
Probab=99.65 E-value=4.8e-17 Score=147.36 Aligned_cols=68 Identities=29% Similarity=0.465 Sum_probs=62.0
Q ss_pred CCcccccCCCCCC--CHHHHHHHHHHHHHHhCCCCCCCChh-----HHHHHHHHHHHHHhhhhhhhhhhhccccc
Q 012891 82 RDPYELLGVPENA--SQDEIKKAFHMLAKQYHPDANKNNPS-----AKRKFQEIRDAYETLRDSEKRAQYDRRRS 149 (454)
Q Consensus 82 ~~~Y~iLgv~~~a--~~~eIk~ayr~la~~~HPD~~~~~~~-----a~~~f~~i~~Ay~vL~d~~~r~~yd~~~~ 149 (454)
+|||++|||++++ |..+||+|||+|+++||||++++.+. |.++|+.|++||+||+||.+|+.||....
T Consensus 1 ~d~y~lLgl~~~a~i~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vL~dp~~R~~Yd~~l~ 75 (171)
T 1fpo_A 1 MDYFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQTLRHPLMRAEYLLSLH 75 (171)
T ss_dssp CHHHHHTTCCSSSCCCHHHHHHHHHHHHHHTCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHTT
T ss_pred CCHHHHCCCCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHhc
Confidence 3899999999999 99999999999999999999987653 55799999999999999999999999743
No 36
>2qwo_B Putative tyrosine-protein phosphatase auxilin; chaperone-cochaperone complex, ATP-binding, nucleotide-bindi nucleus, phosphorylation, stress response; HET: ADP; 1.70A {Bos taurus} PDB: 2qwp_B* 2qwq_B* 2qwr_B* 2qwn_B* 1nz6_A
Probab=99.64 E-value=6.1e-17 Score=130.90 Aligned_cols=56 Identities=21% Similarity=0.440 Sum_probs=52.2
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCh---hHHHHHHHHHHHHHhhhh
Q 012891 82 RDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNP---SAKRKFQEIRDAYETLRD 137 (454)
Q Consensus 82 ~~~Y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~---~a~~~f~~i~~Ay~vL~d 137 (454)
.++|++|||+++||.+|||+|||+||++||||++++++ .|+++|++|++||+||.+
T Consensus 33 ~~~y~~Lgv~~~as~~eIKkAYRklal~~HPDK~~~~~~~~~A~~~F~~i~eAyevL~~ 91 (92)
T 2qwo_B 33 ETKWKPVGMADLVTPEQVKKVYRKAVLVVHPCKATGQPYEQYAKMIFMELNDAWSEFEN 91 (92)
T ss_dssp CCSCCCCCGGGSSSHHHHHHHHHHHHHHTCHHHHTTSTTHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCeecCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchhHhHHHHHHHHHHHHHHHHHh
Confidence 58999999999999999999999999999999998765 378899999999999986
No 37
>2guz_A Mitochondrial import inner membrane translocase subunit TIM14; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=99.61 E-value=2.5e-16 Score=121.85 Aligned_cols=59 Identities=15% Similarity=0.278 Sum_probs=52.8
Q ss_pred CCCCCcccccCCCC-CCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHhhhhhhhh
Q 012891 79 SSKRDPYELLGVPE-NASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKR 141 (454)
Q Consensus 79 ~~~~~~Y~iLgv~~-~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r 141 (454)
+...++|+||||++ +|+.+|||+|||+|++++|||+++ + .++|++|++||++|+|+..|
T Consensus 11 m~~~~~y~iLgl~~~~a~~~eIk~ayr~l~~~~HPDk~g-~---~~~f~~i~~Aye~L~~~~~r 70 (71)
T 2guz_A 11 MNSKEALQILNLTENTLTKKKLKEVHRKIMLANHPDKGG-S---PFLATKINEAKDFLEKRGIS 70 (71)
T ss_dssp CCHHHHHHHTTCCTTTCCHHHHHHHHHHHHHHHCGGGTC-C---HHHHHHHHHHHHHHHHHCCC
T ss_pred CCHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHCCCCCC-C---HHHHHHHHHHHHHHhhhhhc
Confidence 44568999999999 799999999999999999999974 3 46999999999999998765
No 38
>3ag7_A Putative uncharacterized protein F9E10.5; J-domain, AN auxilin-like J-domain containing protein, JAC1, chloroplast accumulation response; 1.80A {Arabidopsis thaliana}
Probab=99.59 E-value=2.9e-16 Score=130.82 Aligned_cols=60 Identities=13% Similarity=0.200 Sum_probs=52.9
Q ss_pred CCCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCC---Ch----hHHHHHHHHHHHHHhhhhhh
Q 012891 79 SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKN---NP----SAKRKFQEIRDAYETLRDSE 139 (454)
Q Consensus 79 ~~~~~~Y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~---~~----~a~~~f~~i~~Ay~vL~d~~ 139 (454)
+...|||+|||++. ||.+|||+|||+||++||||++++ ++ .|+++|++|++||++|+|+.
T Consensus 38 ~~~~d~Y~vl~~~~-As~~eIKkAYRklal~~HPDK~~~~~~~~e~~~~A~~~F~~I~~AYevLsd~~ 104 (106)
T 3ag7_A 38 WSGSGWKPVPLMDM-IEGNAVRKSYQRALLILHPDKLQQKGASANQKYMAEKVFELLQEAWDHFNTLG 104 (106)
T ss_dssp CTTSCCCCCCGGGS-CSHHHHHHHHHHHHHHHCHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred cccCCHHHHcCCCC-CCHHHHHHHHHHHHHHHCcCcCCCcccchhhHHHHHHHHHHHHHHHHHHcCcc
Confidence 44579999999996 999999999999999999999863 22 36889999999999999985
No 39
>3uo3_A J-type CO-chaperone JAC1, mitochondrial; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, J-protein; 1.85A {Saccharomyces cerevisiae} PDB: 3uo2_A
Probab=99.59 E-value=4.2e-16 Score=142.24 Aligned_cols=66 Identities=29% Similarity=0.491 Sum_probs=59.8
Q ss_pred CCCCccccc------CCCC-CCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHhhhhhhhhhhhcccc
Q 012891 80 SKRDPYELL------GVPE-NASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRR 148 (454)
Q Consensus 80 ~~~~~Y~iL------gv~~-~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yd~~~ 148 (454)
...|||+|| |+++ +||.++||+|||+|+++||||++++ +.++|+.|++||+||+||.+|+.||...
T Consensus 9 ~~~d~y~ll~~~~p~~~~~~~a~~~eIk~aYr~la~~~HPDk~~~---a~~~f~~i~~AY~vL~dp~~R~~Yd~~l 81 (181)
T 3uo3_A 9 FTSTFYELFPKTFPKKLPIWTIDQSRLRKEYRQLQAQHHPDMAQQ---GSEQSSTLNQAYHTLKDPLRRSQYMLKL 81 (181)
T ss_dssp CSCCTGGGCTTTCTTCSCCSCCCHHHHHHHHHHHHHTCCTTSCCS---CSSGGGSHHHHHHHHHSHHHHHHHHHHH
T ss_pred CCCCHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHhCcCCCcc---HHHHHHHHHHHHHHHcChHHHHHHHHHH
Confidence 357999999 4665 8999999999999999999999975 5689999999999999999999999964
No 40
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=99.55 E-value=4.7e-16 Score=172.23 Aligned_cols=75 Identities=44% Similarity=0.730 Sum_probs=40.9
Q ss_pred CCCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHhhhhhhhhhhhcccccCCCC
Q 012891 79 SSKRDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDRRRSRGSE 153 (454)
Q Consensus 79 ~~~~~~Y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yd~~~~~g~~ 153 (454)
....|||+||||+++||.+|||+|||+||++||||++++++++.++|++|++||++|+||.+|+.||++|..+..
T Consensus 18 ~~~~~~y~~lg~~~~a~~~~i~~ay~~l~~~~hpd~~~~~~~~~~~f~~i~~ay~~L~~~~~r~~yd~~~~~~~~ 92 (780)
T 3apo_A 18 RHDQNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRKKYDKYGEKGLE 92 (780)
T ss_dssp -----CHHHHTCCTTCCHHHHHHHHCC-----------------------CTHHHHHHSHHHHHHHTTC------
T ss_pred CCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHHcChHHHHHHHhhcccccc
Confidence 456899999999999999999999999999999999987788999999999999999999999999999876654
No 41
>1exk_A DNAJ protein; extended beta-hairpin, CXXCXGXG, zinc-binding motif, chaperone; NMR {Escherichia coli} SCOP: g.54.1.1
Probab=99.32 E-value=1e-12 Score=103.60 Aligned_cols=74 Identities=38% Similarity=0.885 Sum_probs=64.7
Q ss_pred CcceeeeeceeecccCCCCCCccCCCccccCCCccccceEEeC----CccccCCCCCCceEEeeeecccccCCceeec
Q 012891 219 GCTKHVSFDAFVPCDSCHGRGFPADAKTKICSTCRGIGRVTIP----PFTSTCSTCKGLGRIIKDHCMTCKGSGVVDG 292 (454)
Q Consensus 219 G~~k~v~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~----~~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~ 292 (454)
|++++|.+.+.+.|+.|+|+|........+|+.|+|+|.+... .+..+|+.|+|.|.+++++|+.|+|.|++.+
T Consensus 1 G~~~~i~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~G~~~~ 78 (79)
T 1exk_A 1 GVTKEIRIPTLEECDVCHGSGAKPGTQPQTCPTCHGSGQVQMRQGFFAVQQTCPHCQGRGTLIKDPCNKCHGHGRVER 78 (79)
T ss_dssp CTTTSCCCCCEEECGGGTTTSBCSSSCCEECTTTTTSSEEEEEETTEEEEEECTTTTTSSEECSSBCGGGTTSSEEEC
T ss_pred CcEEEEEcccceECCCCcccccCCCccCCCCCCCcCeEEEEEEcCCCEEeeECcCCCCccEECCCcCCCCCCeEEEee
Confidence 6788999999999999999999877777899999999987532 1356899999999999999999999998754
No 42
>1nlt_A Protein YDJ1, mitochondrial protein import protein MAS5; beta-strands, chaperone, heat shock, mitochondrion; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 g.54.1.1
Probab=99.30 E-value=5.7e-12 Score=120.77 Aligned_cols=131 Identities=24% Similarity=0.384 Sum_probs=88.6
Q ss_pred EEEEEEeeccccCcceeee-eceeecccCCCCCCccCC---------CccccCCCccccceEEeCCccccCCCCCCceEE
Q 012891 207 VELVLSFAEAAKGCTKHVS-FDAFVPCDSCHGRGFPAD---------AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRI 276 (454)
Q Consensus 207 ~~l~itlee~~~G~~k~v~-~~~~~~C~~C~G~G~~~~---------~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~ 276 (454)
..+.++-...+..|...-. -.....|+.|+|+|.... ....+|+.|+|.|.+.. ....|+.|+|.|.+
T Consensus 31 k~i~~~r~~~C~~C~G~G~~~g~~~~C~~C~G~G~~~~~~~~g~~~~~~~~~C~~C~G~G~~i~--~~~~C~~C~G~g~~ 108 (248)
T 1nlt_A 31 AKLALNKQILCKECEGRGGKKGAVKKCTSCNGQGIKFVTRQMGPMIQRFQTECDVCHGTGDIID--PKDRCKSCNGKKVE 108 (248)
T ss_dssp EEEEEEEEEECTTTTTCSBSTTTCCCCTTSSSSSCEEEEEESSSEEEEEECSCTTCSSSSSCCC--TTSBCSSSTTSCEE
T ss_pred EEEEeeEEEeCCCCcCccCCCCCCccCCCCCCCcEEEEEEecCceEEEEEEcCCCCCCcCEEec--cCCCCcccCCCceE
Confidence 4455555555543332221 112378999999997421 23568999999998731 26789999999987
Q ss_pred eeeecccccCC-ceeeceE-------------------------------------------------------------
Q 012891 277 IKDHCMTCKGS-GVVDGVK------------------------------------------------------------- 294 (454)
Q Consensus 277 ~~~~C~~C~g~-G~~~~~~------------------------------------------------------------- 294 (454)
.+..-.+.... |+.++++
T Consensus 109 ~~~~~l~V~Ip~G~~~G~~ir~~g~G~~~~~g~~GDl~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAllG~~i~v~tldG 188 (248)
T 1nlt_A 109 NERKILEVHVEPGMKDGQRIVFKGEADQAPDVIPGDVVFIVSERPHKSFKRDGDDLVYEAEIDLLTAIAGGEFALEHVSG 188 (248)
T ss_dssp EEEEEEEEEECTTCCTTCEEEETTCSCCCTTCBCCCEEEEEEECCCSSCEEETTEEEEEEEEEHHHHHHCBCCEEECSSS
T ss_pred eeeEEEEEEECCCccCCCEEEEeeeecCCCCCCcceEEEEEEEecCccceeeCCEEEEEEEeCHHHHhcCCEEEEeCCCC
Confidence 54333333222 2222221
Q ss_pred -EEEEEecCc--cCCCCEEEECCCcCCCCCCCCCccEEEEEEEecCCc
Q 012891 295 -EVKVTIPAG--VDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPI 339 (454)
Q Consensus 295 -~~~V~Ip~G--~~~G~~i~~~g~G~~~~~g~~~GDL~v~i~v~~h~~ 339 (454)
.++|.|||| +++|++++|+|+|++...+...|||||+|+|.-...
T Consensus 189 ~~~~i~ip~g~vt~~g~~~rl~g~Gmp~~~~~~~GDL~V~~~V~~P~~ 236 (248)
T 1nlt_A 189 DWLKVGIVPGEVIAPGMRKVIEGKGMPIPKYGGYGNLIIKFTIKDPEN 236 (248)
T ss_dssp CEEECCBCTTTTCSTTCEEEETTCSCBCSSSCSBCCEEEEEEEECCC-
T ss_pred CEEEEEeCCCCeeCCCeEEEEcCCCCccCCCCCcCCEEEEEEEECCCC
Confidence 589999999 999999999999998654436799999999995443
No 43
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=98.91 E-value=7.1e-10 Score=112.17 Aligned_cols=65 Identities=46% Similarity=0.710 Sum_probs=55.8
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCC---hhHHHHHHHHHHHHHhhhhhhhhhhhcc
Q 012891 82 RDPYELLGVPENASQDEIKKAFHMLAKQYHPDANKNN---PSAKRKFQEIRDAYETLRDSEKRAQYDR 146 (454)
Q Consensus 82 ~~~Y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~---~~a~~~f~~i~~Ay~vL~d~~~r~~yd~ 146 (454)
.++|.+||+.+.++.++|+++|+++++++|||+.+.+ ..++++|++|++||++|+||.+|..||+
T Consensus 382 ~~~y~~lg~~~~~~~~~~~~~y~~~~l~~~pd~~~~~~~~~~a~~~~~~i~~ay~~L~d~~~r~~yd~ 449 (450)
T 2y4t_A 382 RDYYKILGVKRNAKKQEIIKAYRKLALQWHPDNFQNEEEKKKAEKKFIDIAAAKEVLSDPEMRKKFDD 449 (450)
T ss_dssp CCSGGGSCSSTTCCTTHHHHHHHHHHHHSCGGGCCSHHHHHHHHHHHHHHHHHHHHSSGGGGC-----
T ss_pred hhHHHHhCCCccCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHHHHhCCHHHHHhccC
Confidence 4899999999999999999999999999999999753 2478899999999999999999999997
No 44
>2guz_B Mitochondrial import inner membrane translocase subunit TIM16; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=98.78 E-value=4e-09 Score=79.39 Aligned_cols=54 Identities=17% Similarity=0.204 Sum_probs=46.7
Q ss_pred CCcccccCCCCC---CCHHHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHhhhhhh
Q 012891 82 RDPYELLGVPEN---ASQDEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSE 139 (454)
Q Consensus 82 ~~~Y~iLgv~~~---a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~ 139 (454)
.+.|.||||+++ ++.++|+++||+|...+|||+.+. .-...+|++|+++|....
T Consensus 4 ~EA~~ILgv~~~~~~a~~~~Ik~~yr~Lm~~nhPDkGGS----~yl~~ki~~Ake~l~~~~ 60 (65)
T 2guz_B 4 DESCKILNIEESKGDLNMDKINNRFNYLFEVNDKEKGGS----FYLQSKVYRAAERLKWEL 60 (65)
T ss_dssp HHHHHHTTCCGGGTCCSHHHHHHHHHHHHHHTCGGGTCC----HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCCCCcCcCCHHHHHHHHHHHHHHhCCCCCCC----HHHHHHHHHHHHHHHHHH
Confidence 356899999999 999999999999999999999764 356678999999997643
No 45
>3i38_A Putative chaperone DNAJ; structural genomics, protein structure initiative, midwest center for structural genomics, MCSG; 2.30A {Klebsiella pneumoniae subsp}
Probab=98.70 E-value=1.7e-08 Score=84.19 Aligned_cols=74 Identities=23% Similarity=0.351 Sum_probs=60.7
Q ss_pred cCCCCcEEEEEEEeeccccCcceeeeeceeecccCCCCCCccCCCccccCCCccccceEEeCCccccCCCCCCceEEeee
Q 012891 200 HFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKD 279 (454)
Q Consensus 200 ~~g~di~~~l~itlee~~~G~~k~v~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~ 279 (454)
+.|.|+.+++.|+|.||+.|++.++..-
T Consensus 9 R~G~DL~~~~~Isl~eAl~G~~i~v~tl---------------------------------------------------- 36 (109)
T 3i38_A 9 IVGHNLEIVLPLAPWEAALGAKVTVPTL---------------------------------------------------- 36 (109)
T ss_dssp EETTEEEEEEEECHHHHHHCEEEEECCS----------------------------------------------------
T ss_pred EECCEEEEEEEcCHHHHhCCCEEEEEcC----------------------------------------------------
Confidence 3588999999999999999987665421
Q ss_pred ecccccCCceeeceEEEEEEecCccCCCCEEEECCCcCCCCCCCCCccEEEEEEEecCCcc
Q 012891 280 HCMTCKGSGVVDGVKEVKVTIPAGVDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPIF 340 (454)
Q Consensus 280 ~C~~C~g~G~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~g~~~GDL~v~i~v~~h~~f 340 (454)
.+ .++|.||+|+++|++++++|+|++. .+ ..|||||+|+|.-....
T Consensus 37 -----------dG--~~~v~ip~g~~~G~~~rl~G~G~p~-~~-~~GDL~v~~~V~~P~~L 82 (109)
T 3i38_A 37 -----------KE--SILLTVPPGSQAGQRLRIKGKGLVS-KT-HTGDLFAVIKIVMPTKP 82 (109)
T ss_dssp -----------SS--CEEEEECTTCCTTCEEEETTCSCBC-SS-CBCCEEEEEEECCCSSC
T ss_pred -----------CC--CEEEeeCCCcCcCeEEEECCccCCC-CC-CCcCEEEEEEEECCCCC
Confidence 11 3689999999999999999999987 34 78999999999855444
No 46
>1xao_A YDJ1, mitochondrial protein import protein MAS5; beta sheets, chaperone; 2.07A {Saccharomyces cerevisiae}
Probab=98.67 E-value=1.2e-08 Score=86.76 Aligned_cols=76 Identities=20% Similarity=0.140 Sum_probs=58.5
Q ss_pred cCCCCcEEEEEEEeeccccCcceeeeeceeecccCCCCCCccCCCccccCCCccccceEEeCCccccCCCCCCceEEeee
Q 012891 200 HFAPDIQVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADAKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKD 279 (454)
Q Consensus 200 ~~g~di~~~l~itlee~~~G~~k~v~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~ 279 (454)
+.|.|+.+++.|+|.+|+.|++..+..-
T Consensus 4 R~G~DL~~~~~Isl~eAllG~~i~v~tl---------------------------------------------------- 31 (121)
T 1xao_A 4 RDGDDLVYEAEIDLLTAIAGGEFALEHV---------------------------------------------------- 31 (121)
T ss_dssp EETTEEEEEEEEEHHHHHHCEEEEEECT----------------------------------------------------
T ss_pred EECCeEEEEEEcCHHHHhCCCEEEEecC----------------------------------------------------
Confidence 3588999999999999999987665421
Q ss_pred ecccccCCceeeceEEEEEEecCc--cCCCCEEEECCCcCCCCCCCCCccEEEEEEEecCCc
Q 012891 280 HCMTCKGSGVVDGVKEVKVTIPAG--VDSGDTIRVPEAGNAGGRGRQHGNLFIKLKVADDPI 339 (454)
Q Consensus 280 ~C~~C~g~G~~~~~~~~~V~Ip~G--~~~G~~i~~~g~G~~~~~g~~~GDL~v~i~v~~h~~ 339 (454)
..+.++|.|||| +++|++++++|+|++...+...|||||+|+|.-...
T Consensus 32 ------------dG~~~~v~ip~g~v~~~G~~~rl~G~Gmp~~~~~~~GDL~V~~~V~~P~~ 81 (121)
T 1xao_A 32 ------------SGDWLKVGIVPGEVIAPGMRKVIEGKGMPIPKYGGYGNLIIKFTIKFPEN 81 (121)
T ss_dssp ------------TSCEEEEEECTTSCCCTTCEEEETTCSCC------CCCEEEEEEEECCCT
T ss_pred ------------CCCEEEEEeCCCCeeCCCcEEEECCCCCCCCCCCCCCCEEEEEEEECCCC
Confidence 012568999999 999999999999998654446799999999995544
No 47
>2q2g_A HSP40 protein, heat shock 40 kDa protein, putative (fragment); malaria, structural genomics, structural genomics consortium, SGC; 1.90A {Cryptosporidium parvum iowa II}
Probab=98.56 E-value=1.1e-07 Score=86.59 Aligned_cols=71 Identities=20% Similarity=0.263 Sum_probs=58.7
Q ss_pred CCCeEEEEeeCHHHHhCCCEEEEeCCC------------CEEEEEeCCCCCCCcEEEEcCCCcC-CCCCCCCCCcEEEEE
Q 012891 344 GADVYVDSNISFTQAILGGKVDVPTLS------------GKVQVKIPKGVQPGQLLVLRGKGLA-KNGLFLDHGDQYVRF 410 (454)
Q Consensus 344 G~DL~~~~~Isl~eAllG~~~~i~tld------------G~~~v~ip~~~~~g~~~~l~g~Gmp-~~~~~~~rGdL~v~~ 410 (454)
|.|+.+++.|||.||+.|++++|.... ..++|+||+|+.+|++++++|+|-+ ..+. ..|||||.+
T Consensus 3 g~d~~~~l~islee~~~G~~k~i~~~~~~~c~~g~~~~~~~l~V~Ip~G~~~G~~ir~~g~G~~g~~gg--~~GDl~v~i 80 (180)
T 2q2g_A 3 PRSHEVPLLVTLEELYLGKRKKIKVTRKRFIEHKVRNEENIVEVEIKPGWKDGTKLTYSGEGDQESPGT--SPGDLVLII 80 (180)
T ss_dssp -CEEEEEEEECHHHHHHCEEEEEEEEEEEEETTEEEEEEEEEEEEECTTCCTTCEEEETTCSCCSSTTS--CCCEEEEEE
T ss_pred CCCEEEEEEeeHHHhcCCcEEEEEEeEEEecCCceEEeeEEEEEEECCCCcCCcEEEEeeccCCCCCCC--ccccEEEEE
Confidence 789999999999999999998887531 2378999999999999999999987 4443 369999999
Q ss_pred EEECCC
Q 012891 411 RVNFPT 416 (454)
Q Consensus 411 ~V~~P~ 416 (454)
+|.-..
T Consensus 81 ~~~~h~ 86 (180)
T 2q2g_A 81 QTKTHP 86 (180)
T ss_dssp EECCCS
T ss_pred EEEecc
Confidence 987433
No 48
>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A
Probab=98.51 E-value=1e-07 Score=94.68 Aligned_cols=73 Identities=22% Similarity=0.364 Sum_probs=57.0
Q ss_pred ccCCCeEEEEeeCHHHHhCCCEEEEeCC------CC--------EEEEEeCCCCCCCcEEEEcCCCcCCCCCCCCCCcEE
Q 012891 342 RDGADVYVDSNISFTQAILGGKVDVPTL------SG--------KVQVKIPKGVQPGQLLVLRGKGLAKNGLFLDHGDQY 407 (454)
Q Consensus 342 R~G~DL~~~~~Isl~eAllG~~~~i~tl------dG--------~~~v~ip~~~~~g~~~~l~g~Gmp~~~~~~~rGdL~ 407 (454)
+.|.||.+++.|+|.||..|.+++|..- .| .++|+||+|+++|++|+++|+|.|..+. ...||||
T Consensus 138 ~~g~Dl~~~l~vsleea~~G~~k~i~i~~~v~~g~G~v~~~~~~~l~V~IP~Gv~~G~~Irl~G~G~~g~~g-g~~GDL~ 216 (329)
T 3lz8_A 138 ARGHDLEIEVAVFLEETLAEQTRTISYNLPVYNVFGMIESETPKTLNVKIPAGVVDGQRIRLKGQGTPGENG-GPNGDLW 216 (329)
T ss_dssp CCCCCEEEEECCCTTGGGSCEEEEEEEEEEECCSCC-CCEEEEEEEEEEECTTCCTTCEEEESSCSCCC----CCCCCEE
T ss_pred CCCCCEEEEEecchhhhhhccceEEEEEEEeecCCeEEEEecceEEEEeCCCCCCCCCEEEEcccccCCCCC-CCCCcEE
Confidence 5688899999999999998887766542 22 3689999999999999999999986421 2369999
Q ss_pred EEEEEECC
Q 012891 408 VRFRVNFP 415 (454)
Q Consensus 408 v~~~V~~P 415 (454)
|+|+|.-.
T Consensus 217 v~I~v~~h 224 (329)
T 3lz8_A 217 LVIHIAPH 224 (329)
T ss_dssp EEECCCCC
T ss_pred EEEEEecC
Confidence 99887643
No 49
>3agx_A DNAJ homolog subfamily B member 1; chaperone; 1.85A {Homo sapiens} PDB: 3agy_A 3agz_A 2qld_A
Probab=98.50 E-value=1.8e-07 Score=85.19 Aligned_cols=71 Identities=14% Similarity=0.161 Sum_probs=56.3
Q ss_pred CCCeEEEEeeCHHHHhCCCEEEEeCC------CC--------EEEEEeCCCCCCCcEEEEcCCCcCCCCCCCCCCcEEEE
Q 012891 344 GADVYVDSNISFTQAILGGKVDVPTL------SG--------KVQVKIPKGVQPGQLLVLRGKGLAKNGLFLDHGDQYVR 409 (454)
Q Consensus 344 G~DL~~~~~Isl~eAllG~~~~i~tl------dG--------~~~v~ip~~~~~g~~~~l~g~Gmp~~~~~~~rGdL~v~ 409 (454)
|.|+.+++.|||.||..|++++|..- .| .++|+||+|+.+|++++++|+|-+..+. ..|||||.
T Consensus 2 ~~d~~~~l~islee~~~G~~k~i~i~~~c~~c~G~g~~~~~~~l~V~Ip~G~~~G~~ir~~G~G~~~~~g--~~GDl~v~ 79 (181)
T 3agx_A 2 DPPVTHDLRVSLEEIYSGCTKKMKISHKRLNPDGKSIRNEDKILTIEVKKGWKEGTKITFPKEGDQTSNN--IPADIVFV 79 (181)
T ss_dssp ----CEEEEECHHHHHHCEEEEEEEEEEEECTTSSCEEEEEEEEEEEECTTCCTTCEEEETTCSCCCSSS--CCCCEEEE
T ss_pred CCCEEEEEEEEHHHhcCCcEEEEEEecccCCCCCceEEEEeEEEEEEECCCccCCcEEEEeeccccCCCC--CcccEEEE
Confidence 57999999999999999999887642 23 2689999999999999999999876543 46999999
Q ss_pred EEEECCC
Q 012891 410 FRVNFPT 416 (454)
Q Consensus 410 ~~V~~P~ 416 (454)
++|.-..
T Consensus 80 i~~~~h~ 86 (181)
T 3agx_A 80 LKDKPHN 86 (181)
T ss_dssp EEECCCS
T ss_pred EEEeccc
Confidence 9997544
No 50
>1c3g_A Heat shock protein 40; beta sheets, short helices, chaperone; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 PDB: 2b26_A
Probab=98.47 E-value=2.6e-07 Score=83.28 Aligned_cols=70 Identities=13% Similarity=0.184 Sum_probs=57.8
Q ss_pred CCeEEEEeeCHHHHhCCCEEEEeCC----CC-----EEEEEeCCCCCCCcEEEEcCCCcCCC-CCCCCCCcEEEEEEEEC
Q 012891 345 ADVYVDSNISFTQAILGGKVDVPTL----SG-----KVQVKIPKGVQPGQLLVLRGKGLAKN-GLFLDHGDQYVRFRVNF 414 (454)
Q Consensus 345 ~DL~~~~~Isl~eAllG~~~~i~tl----dG-----~~~v~ip~~~~~g~~~~l~g~Gmp~~-~~~~~rGdL~v~~~V~~ 414 (454)
.|+.+++.|||.||+.|++++|... .| .++|+||+|+.+|++++++|+|-+.. +. ..|||||.++|.-
T Consensus 1 ~d~~~~l~islee~~~G~~k~i~~~~~~~~G~~~~~~l~V~Ip~G~~~G~~ir~~g~G~~~~~gg--~~GDl~v~i~v~~ 78 (170)
T 1c3g_A 1 ETVQVNLPVSLEDLFVGKKKSFKIGRKGPHGASEKTQIDIQLKPGWKAGTKITYKNQGDYNPQTG--RRKTLQFVIQEKS 78 (170)
T ss_dssp CEEEEEEEECHHHHHHTCEEEEEEEEEETTTEEEEEEEEEECCTTCCTTCEEEESSCSSBCSSSS--CBCEEEEEEEECC
T ss_pred CCEEEEEEeEHHHhhCCcEEEEEEEEecCCCcEEeEEEEEEeCCCccCCCEEEEeccccCCCCCC--ccccEEEEEEEcc
Confidence 3889999999999999999888753 12 37899999999999999999998543 32 3599999999975
Q ss_pred CC
Q 012891 415 PT 416 (454)
Q Consensus 415 P~ 416 (454)
..
T Consensus 79 h~ 80 (170)
T 1c3g_A 79 HP 80 (170)
T ss_dssp CS
T ss_pred CC
Confidence 43
No 51
>3lcz_A YCZA, inhibitor of trap, regulated by T-box (Trp) seque; anti-trap, tryptophan RNA-binding attenuation PROT transcription attenuation; 2.06A {Bacillus licheniformis} PDB: 3ld0_A
Probab=97.48 E-value=4.1e-05 Score=54.89 Aligned_cols=30 Identities=37% Similarity=0.836 Sum_probs=24.0
Q ss_pred ccccCCCCCCceEEeeeecccccCCceeec
Q 012891 263 FTSTCSTCKGLGRIIKDHCMTCKGSGVVDG 292 (454)
Q Consensus 263 ~~~~C~~C~G~G~~~~~~C~~C~g~G~~~~ 292 (454)
++.+|+.|+|+|.++.++|+.|+|.|++..
T Consensus 8 ~~~~C~~C~GsG~~i~~~C~~C~G~G~v~~ 37 (53)
T 3lcz_A 8 LETTCPNCNGSGREEPEPCPKCLGKGVILT 37 (53)
T ss_dssp HEEECTTTTTSCEETTEECTTTTTSSEEEC
T ss_pred eeccCcCCcccccCCCCcCCCCCCcEEEEE
Confidence 456788888888888888888888887654
No 52
>3pmq_A Decaheme cytochrome C MTRF; greek KEY, C type cytochrome, outer membrane, electron trans; HET: HEC; 3.20A {Shewanella oneidensis}
Probab=97.43 E-value=1.5e-05 Score=85.43 Aligned_cols=70 Identities=17% Similarity=0.314 Sum_probs=56.3
Q ss_pred EEEEEEEeeccccCcceeeeeceeecccCCCCCCccCCC---ccccCCCccccceEEeC--------------C---ccc
Q 012891 206 QVELVLSFAEAAKGCTKHVSFDAFVPCDSCHGRGFPADA---KTKICSTCRGIGRVTIP--------------P---FTS 265 (454)
Q Consensus 206 ~~~l~itlee~~~G~~k~v~~~~~~~C~~C~G~G~~~~~---~~~~C~~C~G~G~~~~~--------------~---~~~ 265 (454)
.+.+.|+|+|+..|.++++.+.+...|..|+|+|...+. ...+|+.|+|.....-+ . ...
T Consensus 168 ~~~l~i~feeA~~G~~k~i~v~~~~~C~tCHGsGA~~Gt~~~~~~tC~tCHGs~~~~~~~~~~~~~iH~iH~G~fP~~~~ 247 (669)
T 3pmq_A 168 ITNQHYDWQSSGNMLAYTRNLVSIDTCNSCHSNLAFHGGRYNQVETCVTCHNSKKVSNAADIFPQMIHSKHLTGFPQSIS 247 (669)
T ss_dssp SCCCEEEEECSSSSCCCCCCCCCSHHHHHHHSSCCTTTTTSCSSSCSTTTSSTTTCCCSSCSHHHHHHHHTTSSCSSCTT
T ss_pred eEEEEEEhHHhhCCCceEEEeccCCcCCCCCCCCCcCCccCcCCccCCCCCCCcccCCccccccceeeeeeccCCCCccC
Confidence 457889999999999999999999999999999998886 57899999998421100 0 135
Q ss_pred cCCCCCCceE
Q 012891 266 TCSTCKGLGR 275 (454)
Q Consensus 266 ~C~~C~G~G~ 275 (454)
.|..|+..+.
T Consensus 248 ~C~~CH~~~~ 257 (669)
T 3pmq_A 248 NCQTCHADNP 257 (669)
T ss_dssp CCTTTSCCCT
T ss_pred cchhhcCCcc
Confidence 6888888764
No 53
>2ctt_A DNAJ homolog subfamily A member 3; ZING finger, beta-hairpin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.40 E-value=8.6e-05 Score=61.05 Aligned_cols=48 Identities=27% Similarity=0.711 Sum_probs=38.4
Q ss_pred eecccCCCCCCccCC-----CccccCCCccccceEEeCCccccCCCCCCceEEeeee
Q 012891 229 FVPCDSCHGRGFPAD-----AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRIIKDH 280 (454)
Q Consensus 229 ~~~C~~C~G~G~~~~-----~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~ 280 (454)
...|+.|+|+|.... ....+|+.|+|.|.+ +..+|+.|+|.|.+.+.+
T Consensus 45 ~~~C~~C~G~G~~~~~~G~~~~~~~C~~C~G~G~~----i~~~C~~C~G~G~v~~~k 97 (104)
T 2ctt_A 45 VQHCHYCGGSGMETINTGPFVMRSTCRRCGGRGSI----IISPCVVCRGAGQAKQKK 97 (104)
T ss_dssp CEECSSSSSSCEEEEEETTEEEEEECSSSSSSSEE----CSSCCSSSSSCSEECCCC
T ss_pred CccCCCCCCCEEEEEEeCCEEEEEECCcCCCcceE----CCCcCCCCCCeeEEEEEE
Confidence 468999999996521 234689999999998 467899999999987543
No 54
>1exk_A DNAJ protein; extended beta-hairpin, CXXCXGXG, zinc-binding motif, chaperone; NMR {Escherichia coli} SCOP: g.54.1.1
Probab=97.39 E-value=6.7e-05 Score=58.35 Aligned_cols=45 Identities=33% Similarity=0.824 Sum_probs=32.6
Q ss_pred eecccCCCCCCccCC-----CccccCCCccccceEEeCCccccCCCCCCceEEe
Q 012891 229 FVPCDSCHGRGFPAD-----AKTKICSTCRGIGRVTIPPFTSTCSTCKGLGRII 277 (454)
Q Consensus 229 ~~~C~~C~G~G~~~~-----~~~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~ 277 (454)
...|+.|+|+|.... ....+|+.|+|.|.+ +..+|+.|+|.|.+.
T Consensus 28 ~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~----~~~~C~~C~G~G~~~ 77 (79)
T 1exk_A 28 PQTCPTCHGSGQVQMRQGFFAVQQTCPHCQGRGTL----IKDPCNKCHGHGRVE 77 (79)
T ss_dssp CEECTTTTTSSEEEEEETTEEEEEECTTTTTSSEE----CSSBCGGGTTSSEEE
T ss_pred CCCCCCCcCeEEEEEEcCCCEEeeECcCCCCccEE----CCCcCCCCCCeEEEe
Confidence 467888888886432 113578888888887 356788888888774
No 55
>2bx9_A Anti-trap, AT, tryptophan RNA-binding attenuator protein-inhibit protein; transcription regulation; 2.80A {Bacillus subtilis} PDB: 2ko8_A* 2zp8_E* 2zp9_C*
Probab=96.75 E-value=0.00064 Score=48.64 Aligned_cols=24 Identities=38% Similarity=0.933 Sum_probs=10.6
Q ss_pred cCCCCCCceEEeeeecccccCCce
Q 012891 266 TCSTCKGLGRIIKDHCMTCKGSGV 289 (454)
Q Consensus 266 ~C~~C~G~G~~~~~~C~~C~g~G~ 289 (454)
+|+.|+|+|.++..+|+.|.|.|.
T Consensus 11 ~C~~C~GsG~~~~~~C~~C~G~G~ 34 (53)
T 2bx9_A 11 ACPKCERAGEIEGTPCPACSGKGV 34 (53)
T ss_dssp ECTTTTTSSEETTEECTTTTTSSE
T ss_pred cCCCCcceeccCCCCCccCCCCcc
Confidence 344444444444444444444443
No 56
>3lcz_A YCZA, inhibitor of trap, regulated by T-box (Trp) seque; anti-trap, tryptophan RNA-binding attenuation PROT transcription attenuation; 2.06A {Bacillus licheniformis} PDB: 3ld0_A
Probab=96.71 E-value=0.00079 Score=48.14 Aligned_cols=28 Identities=36% Similarity=0.854 Sum_probs=15.4
Q ss_pred ccCCCccccceEEeCCccccCCCCCCceEEee
Q 012891 247 KICSTCRGIGRVTIPPFTSTCSTCKGLGRIIK 278 (454)
Q Consensus 247 ~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~ 278 (454)
.+|+.|+|+|.+ +..+|+.|+|.|.+.+
T Consensus 10 ~~C~~C~GsG~~----i~~~C~~C~G~G~v~~ 37 (53)
T 3lcz_A 10 TTCPNCNGSGRE----EPEPCPKCLGKGVILT 37 (53)
T ss_dssp EECTTTTTSCEE----TTEECTTTTTSSEEEC
T ss_pred ccCcCCcccccC----CCCcCCCCCCcEEEEE
Confidence 345555555554 2355666666665543
No 57
>2bx9_A Anti-trap, AT, tryptophan RNA-binding attenuator protein-inhibit protein; transcription regulation; 2.80A {Bacillus subtilis} PDB: 2ko8_A* 2zp8_E* 2zp9_C*
Probab=96.54 E-value=0.0012 Score=47.16 Aligned_cols=26 Identities=31% Similarity=0.751 Sum_probs=12.0
Q ss_pred ecccCCCCCCccCCCccccCCCccccceE
Q 012891 230 VPCDSCHGRGFPADAKTKICSTCRGIGRV 258 (454)
Q Consensus 230 ~~C~~C~G~G~~~~~~~~~C~~C~G~G~~ 258 (454)
..|+.|+|+|.... .+|+.|+|.|.+
T Consensus 10 ~~C~~C~GsG~~~~---~~C~~C~G~G~v 35 (53)
T 2bx9_A 10 VACPKCERAGEIEG---TPCPACSGKGVI 35 (53)
T ss_dssp EECTTTTTSSEETT---EECTTTTTSSEE
T ss_pred ccCCCCcceeccCC---CCCccCCCCccE
Confidence 35555555554421 334444444443
No 58
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=88.00 E-value=0.28 Score=52.82 Aligned_cols=48 Identities=15% Similarity=0.267 Sum_probs=38.2
Q ss_pred CCCCCcccccCCCCCCCH--HHHHHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHh
Q 012891 79 SSKRDPYELLGVPENASQ--DEIKKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYET 134 (454)
Q Consensus 79 ~~~~~~Y~iLgv~~~a~~--~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~v 134 (454)
....+||.+||++.++.. .+|++|||+||+..+++ .+++..|..|+.|
T Consensus 626 ~~~~~~~~~lG~~~~~~~lr~~~~~ayr~la~~~~~~--------~~r~~lvd~a~~v 675 (681)
T 2pzi_A 626 DNKASTNHILGFPFTSHGLRLGVEASLRSLARVAPTQ--------RHRYTLVDMANKV 675 (681)
T ss_dssp SCCCSSSEETTEESSHHHHHHHHHHHHHHHHHHCSSH--------HHHHHHHHHHHHH
T ss_pred ccCCCCcccCCCCCChHHHHHHHHHHHHHHHHhCCCh--------HHHHHHHHHhccc
Confidence 345679999999776655 67999999999975433 5789999999876
No 59
>2aus_D NOP10, ribosome biogenesis protein NOP10; isomerase, structural protein, isomerase-structural protein; 2.10A {Pyrococcus abyssi} PDB: 3lwr_B 3lwo_B* 3lwq_B* 3lwp_B 3lwv_B 3hax_C* 2hvy_C* 3hay_C* 2ey4_E 3hjw_B* 2rfk_B* 3hjy_B 3mqk_B
Probab=33.23 E-value=24 Score=25.43 Aligned_cols=23 Identities=35% Similarity=0.859 Sum_probs=11.7
Q ss_pred cccCCCccccceEEeCCccccCCCCCCce
Q 012891 246 TKICSTCRGIGRVTIPPFTSTCSTCKGLG 274 (454)
Q Consensus 246 ~~~C~~C~G~G~~~~~~~~~~C~~C~G~G 274 (454)
...|+.| |..+ +...|+.|++.-
T Consensus 5 mr~C~~C---g~YT---Lk~~CP~CG~~t 27 (60)
T 2aus_D 5 IRKCPKC---GRYT---LKETCPVCGEKT 27 (60)
T ss_dssp CEECTTT---CCEE---SSSBCTTTCSBC
T ss_pred ceECCCC---CCEE---ccccCcCCCCcc
Confidence 4566666 3332 244566665543
No 60
>2apo_B Ribosome biogenesis protein NOP10; protein-protein complex, box H/ACA, snoRNP, pseudouridine synthase, RNA modification; 1.95A {Methanocaldococcus jannaschii} SCOP: g.41.16.1 PDB: 2aqc_A
Probab=31.61 E-value=28 Score=25.03 Aligned_cols=22 Identities=32% Similarity=0.773 Sum_probs=10.6
Q ss_pred cccCCCccccceEEeCCccccCCCCCCc
Q 012891 246 TKICSTCRGIGRVTIPPFTSTCSTCKGL 273 (454)
Q Consensus 246 ~~~C~~C~G~G~~~~~~~~~~C~~C~G~ 273 (454)
..+|+.| |..+ +...|+.|++.
T Consensus 6 mr~C~~C---gvYT---Lk~~CP~CG~~ 27 (60)
T 2apo_B 6 MKKCPKC---GLYT---LKEICPKCGEK 27 (60)
T ss_dssp CEECTTT---CCEE---SSSBCSSSCSB
T ss_pred ceeCCCC---CCEe---ccccCcCCCCc
Confidence 3456666 3322 24455555543
No 61
>2cqn_A Formin-binding protein 3; FF domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: a.159.2.1
Probab=30.51 E-value=64 Score=24.24 Aligned_cols=53 Identities=19% Similarity=0.285 Sum_probs=38.8
Q ss_pred CHHHHHHHHHHHHHHhCCCCCCCCh--hHHHHHHHHHHHHHhhhh-hhhhhhhcccc
Q 012891 95 SQDEIKKAFHMLAKQYHPDANKNNP--SAKRKFQEIRDAYETLRD-SEKRAQYDRRR 148 (454)
Q Consensus 95 ~~~eIk~ayr~la~~~HPD~~~~~~--~a~~~f~~i~~Ay~vL~d-~~~r~~yd~~~ 148 (454)
-..-++.+|+.+.+...|.....+. .+..+|..-. +|..+.+ ..++.+|+.|.
T Consensus 7 r~rrl~~~F~~mLk~~~p~I~~~s~We~vr~~~e~~~-~fkav~~E~eR~~lFeeYi 62 (77)
T 2cqn_A 7 GMKRKESAFKSMLKQAAPPIELDAVWEDIRERFVKEP-AFEDITLESERKRIFKDFM 62 (77)
T ss_dssp SHHHHHHHHHHHHHTCSSCCCTTCCHHHHHHHHTTSH-HHHTCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHccCH-HHHhcCCHHHHHHHHHHHH
Confidence 3456899999999988888776543 3555565544 7998865 57888888874
No 62
>1msz_A DNA-binding protein smubp-2; R3H fold; NMR {Homo sapiens} SCOP: d.68.7.1
Probab=30.46 E-value=31 Score=26.71 Aligned_cols=24 Identities=33% Similarity=0.570 Sum_probs=21.7
Q ss_pred EEECCCCCCHHHHHHHHHHHHHhc
Q 012891 411 RVNFPTALNERQRAILEEFAEEEI 434 (454)
Q Consensus 411 ~V~~P~~ls~~q~~~l~~~~~~~~ 434 (454)
.+.||..||+.||.++-+++....
T Consensus 35 ~l~FP~sLs~~eR~~IH~lA~~~G 58 (86)
T 1msz_A 35 QLEFPPSLNSHDRLRVHQIAEEHG 58 (86)
T ss_dssp EEEECTTCCSHHHHHHHHHHHHTT
T ss_pred EEEcCCCCCHHHHHHHHHHHHHcC
Confidence 689999999999999999998764
No 63
>1ltl_A DNA replication initiator (CDC21/CDC54); HET: DNA; 3.00A {Methanothermobacterthermautotrophicus} SCOP: b.40.4.11
Probab=30.15 E-value=55 Score=30.75 Aligned_cols=17 Identities=18% Similarity=0.395 Sum_probs=0.0
Q ss_pred CCCHHHHHHHHHHHHHh
Q 012891 417 ALNERQRAILEEFAEEE 433 (454)
Q Consensus 417 ~ls~~q~~~l~~~~~~~ 433 (454)
.+|+++.+.++++++..
T Consensus 255 ~~t~ed~~~i~~ls~~~ 271 (279)
T 1ltl_A 255 QISEEDEEKIKELAGDP 271 (279)
T ss_dssp -----------------
T ss_pred CCCHHHHHHHHHHhcCC
Confidence 36777777777776543
No 64
>3nyb_B Protein AIR2; polya RNA polymerase, zinc knuckle protein, RNA surveillance binds to TRF4P/AIR2P heterodimer; 2.70A {Saccharomyces cerevisiae}
Probab=27.07 E-value=49 Score=25.26 Aligned_cols=50 Identities=18% Similarity=0.237 Sum_probs=27.0
Q ss_pred eeecccCCCCCCccCCCc--cccCCCccccceEEeC----CccccCCCCCCceEEe
Q 012891 228 AFVPCDSCHGRGFPADAK--TKICSTCRGIGRVTIP----PFTSTCSTCKGLGRII 277 (454)
Q Consensus 228 ~~~~C~~C~G~G~~~~~~--~~~C~~C~G~G~~~~~----~~~~~C~~C~G~G~~~ 277 (454)
+.+.|..|...|.....- ...|-.|...|.+... .-...|-.|+..|.+-
T Consensus 4 k~~~C~~Cg~~GH~~~~Cp~~~rcY~c~~~gh~~~~c~~p~~~~~CYnCG~~GH~~ 59 (83)
T 3nyb_B 4 KKVQCTLCKSKKHSKERCPSIWRAYILVDDNEKAKPKVLPFHTIYCYNCGGKGHFG 59 (83)
T ss_dssp ---CCSSSCCSSSCGGGCGGGTCCCCBC-------------CCCBCSSSSCBSSCG
T ss_pred ccCCCCCCCCCCCccccCCCcccccccccCCcccccccCCCCCCeecccCCCCcCc
Confidence 456799999998765432 2357778877765321 1246788888888754
No 65
>2ns6_A Mobilization protein A; nickase, 5-strand antiparallel beta sheet, metalloenzyme, hydrolase; 2.10A {Pseudomonas aeruginosa}
Probab=26.37 E-value=77 Score=28.00 Aligned_cols=32 Identities=25% Similarity=0.442 Sum_probs=26.0
Q ss_pred CCcEEEEEEEECCCCCCHHH-HHHHHHHHHHhc
Q 012891 403 HGDQYVRFRVNFPTALNERQ-RAILEEFAEEEI 434 (454)
Q Consensus 403 rGdL~v~~~V~~P~~ls~~q-~~~l~~~~~~~~ 434 (454)
.+-|.=+|.|.+|..||.+| ++|+++|.+...
T Consensus 67 na~lare~~iALP~EL~~eq~~~L~~~f~~~~~ 99 (185)
T 2ns6_A 67 NGRLFKEVEFALPVELTLDQQKALASEFAQHLT 99 (185)
T ss_dssp TSCCEEEEEEECCTTSCHHHHHHHHHHHHHHHH
T ss_pred CCeEEEEEEEECCccCCHHHHHHHHHHHHHHHH
Confidence 47789999999999999855 577788877654
No 66
>3zxf_A Galectin-7; sugar binding protein; 1.38A {Homo sapiens} SCOP: b.29.1.3 PDB: 1bkz_A 2gal_A* 3gal_A* 4gal_A* 5gal_A* 3zxe_A*
Probab=24.83 E-value=1.2e+02 Score=25.14 Aligned_cols=43 Identities=23% Similarity=0.405 Sum_probs=30.9
Q ss_pred EEEeCCCCCCCcEEEEcCCCcCCCC--------CCCCCCcEEEEEEEECCC
Q 012891 374 QVKIPKGVQPGQLLVLRGKGLAKNG--------LFLDHGDQYVRFRVNFPT 416 (454)
Q Consensus 374 ~v~ip~~~~~g~~~~l~g~Gmp~~~--------~~~~rGdL~v~~~V~~P~ 416 (454)
.-.||.+.++|+.++|.|.=.+..+ ......|+.++|++.|.+
T Consensus 9 ~~~i~~gl~~G~~i~I~G~v~~~a~rF~Inl~~g~~~~~dialHfnpRf~~ 59 (138)
T 3zxf_A 9 KSSLPEGIRPGTVLRIRGLVPPNASRFHVNLLCGEEQGSDAALHFNPRLDT 59 (138)
T ss_dssp EEECTTCCCSSEEEEEEEEECTTCCBEEEEEESSSSTTCCEEEEEEEETTT
T ss_pred EeecCCCCCCCCEEEEEEEECCCCCEEEEEeeeCCCCCCCEEEEEEEEcCC
Confidence 4578999999999999886433221 111246999999999964
No 67
>2lli_A Protein AIR2; RNA surveillance, RNA degradation, RNA binding, exosome, RNA protein; NMR {Saccharomyces cerevisiae}
Probab=24.45 E-value=27 Score=28.53 Aligned_cols=10 Identities=40% Similarity=1.182 Sum_probs=4.6
Q ss_pred cccCCCCCCc
Q 012891 231 PCDSCHGRGF 240 (454)
Q Consensus 231 ~C~~C~G~G~ 240 (454)
.|..|...|.
T Consensus 6 ~C~~C~~~GH 15 (124)
T 2lli_A 6 KCNNCSQRGH 15 (124)
T ss_dssp CCSSCSSSSC
T ss_pred cccCCCCCCc
Confidence 3444444444
No 68
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=22.20 E-value=7.6 Score=40.54 Aligned_cols=57 Identities=21% Similarity=0.423 Sum_probs=36.9
Q ss_pred cccCCCCCCccCC-----CccccCCCccccceEEe---------C----C-ccccCCCCCCceEEeeeecccccCC
Q 012891 231 PCDSCHGRGFPAD-----AKTKICSTCRGIGRVTI---------P----P-FTSTCSTCKGLGRIIKDHCMTCKGS 287 (454)
Q Consensus 231 ~C~~C~G~G~~~~-----~~~~~C~~C~G~G~~~~---------~----~-~~~~C~~C~G~G~~~~~~C~~C~g~ 287 (454)
.|..|++...... .....|-.||....... + . -...|..|+..=......|..|+..
T Consensus 13 ~C~~CH~~~~~~~~~~~~~~~~~C~~CH~~~~~~~~~~~~~~~~~h~~H~~~~~~C~~CH~~h~~~~~~C~~CH~~ 88 (571)
T 1y0p_A 13 ECDSCHTPDGELSNDSLTYENTQCVSCHGTLAEVAETTKHEHYNAHASHFPGEVACTSCHSAHEKSMVYCDSCHSF 88 (571)
T ss_dssp CGGGTSCTTCCCCCTTCHHHHHHHHHHHCCHHHHHTTSCCSSCCTTSCSCCSCCCGGGTCCSSSCBCCGGGGTCCC
T ss_pred ChhhcCCCcccccccccccccchhhhhCcChhhcccccccccCCccccccCCCCCccccCccccCCCccccccChh
Confidence 7999998764321 13568999997532110 0 0 1457999997644455789999964
No 69
>2r0h_A CGL3 lectin; galectin-related, sugar binding protein, chitotriose, chitooligosaccharides; HET: CTO; 1.90A {Coprinus cinereus} PDB: 2r0f_A*
Probab=22.07 E-value=94 Score=26.95 Aligned_cols=43 Identities=12% Similarity=0.208 Sum_probs=31.5
Q ss_pred EEEeCCCCCCCcEEEEcCCCcCC----------CCC-----CCCCCcEEEEEEEECCC
Q 012891 374 QVKIPKGVQPGQLLVLRGKGLAK----------NGL-----FLDHGDQYVRFRVNFPT 416 (454)
Q Consensus 374 ~v~ip~~~~~g~~~~l~g~Gmp~----------~~~-----~~~rGdL~v~~~V~~P~ 416 (454)
.+.|+.+.++|.++.|.|.-++. .+. ....+|+.++|++.|.+
T Consensus 10 ~~~L~~~L~~G~~i~I~G~v~~~~~~~~~~~~~a~rF~INl~~g~~DIalHfNPRF~e 67 (164)
T 2r0h_A 10 TVDLSEPLKDNGIIVFQSDKLDLEPSPNLGPTGIDNTNVNLINAKGDVLLHIGIRRRE 67 (164)
T ss_dssp EEECSSCCCTTCEEEEECSCCCCSCCSCCCTTSSCCEEEEEEETTSCEEEEEEEETTT
T ss_pred eEECCCCccCCCEEEEEEEecCcccccccCCCCCCeEEEEeeeCCCCEEEEEeeccCC
Confidence 67899999999999999986531 110 01235899999999874
No 70
>4a3n_A Transcription factor SOX-17; 2.40A {Homo sapiens} SCOP: a.21.1.0
Probab=20.78 E-value=1.1e+02 Score=21.76 Aligned_cols=42 Identities=19% Similarity=0.203 Sum_probs=31.3
Q ss_pred HHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHhhhhhhhhhhhcc
Q 012891 100 KKAFHMLAKQYHPDANKNNPSAKRKFQEIRDAYETLRDSEKRAQYDR 146 (454)
Q Consensus 100 k~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yd~ 146 (454)
.+.+|...+.-||+... .+.-+.|.+.|..|++..+....+.
T Consensus 14 ~~~~r~~~~~~~p~~~~-----~eisk~lg~~Wk~ls~~eK~~y~~~ 55 (71)
T 4a3n_A 14 AKDERKRLAQQNPDLHN-----AELSKMLGKSWKALTLAEKRPFVEE 55 (71)
T ss_dssp HHHHHHHHHTTCTTSCH-----HHHHHHHHHHHHHSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCH-----HHHHHHHHHHHhcCCHHHHHHHHHH
Confidence 45667777888888652 4677889999999998876655544
Done!