Query 012892
Match_columns 454
No_of_seqs 287 out of 1771
Neff 8.5
Searched_HMMs 29240
Date Mon Mar 25 18:15:20 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012892.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/012892hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3vla_A EDGP; extracellular, in 100.0 1.8E-63 6.1E-68 506.3 28.2 341 95-451 6-398 (413)
2 3aup_A SBG7S, BG, basic 7S glo 100.0 2.2E-59 7.4E-64 476.3 28.0 337 97-454 9-395 (403)
3 3psg_A Pepsinogen; hydrolase(a 100.0 3.8E-58 1.3E-62 461.3 30.0 305 97-452 45-370 (370)
4 2x0b_A Renin; hydrolase-hormon 100.0 1.8E-57 6.2E-62 457.5 24.6 303 98-452 51-383 (383)
5 1tzs_A Cathepsin E; hydrolase, 100.0 8.3E-57 2.8E-61 449.2 29.1 308 97-454 12-344 (351)
6 1dpj_A Proteinase A; proteinas 100.0 1.6E-56 5.6E-61 443.3 29.5 302 99-452 4-329 (329)
7 3cms_A Chymosin B; hydrolase, 100.0 5.3E-57 1.8E-61 445.6 25.2 301 99-452 5-323 (323)
8 1j71_A Candidapepsin, aspartic 100.0 1.8E-56 6.3E-61 443.8 27.5 298 98-454 3-326 (334)
9 1am5_A Pepsin, acid proteinase 100.0 3.5E-56 1.2E-60 440.0 27.9 301 99-452 3-324 (324)
10 1t6e_X Xylanase inhibitor; two 100.0 4.6E-56 1.6E-60 448.5 28.2 326 98-452 3-373 (381)
11 1mpp_A Pepsin; hydrolase(acid 100.0 3.2E-56 1.1E-60 446.7 26.6 313 96-454 6-357 (361)
12 3fv3_A SAPP1P-secreted asparti 100.0 7.6E-56 2.6E-60 440.3 28.3 300 98-454 3-331 (339)
13 2qzx_A Candidapepsin-5; aspart 100.0 6.3E-56 2.2E-60 441.4 26.5 300 98-454 3-333 (342)
14 4aa9_A Chymosin; hydrolase, as 100.0 3.1E-56 1.1E-60 439.7 23.7 300 100-452 3-320 (320)
15 1htr_B Gastricsin; aspartyl pr 100.0 9.8E-56 3.4E-60 437.7 25.9 303 99-452 4-329 (329)
16 2bju_A Plasmepsin II; aspartic 100.0 7.5E-56 2.6E-60 453.1 25.3 301 98-452 128-450 (453)
17 3k1w_A Renin; protease, altern 100.0 1.1E-55 3.9E-60 439.4 25.2 306 96-452 6-340 (341)
18 3c9x_A Trichoderma reesei aspa 100.0 1.6E-55 5.3E-60 436.2 25.1 298 108-451 12-329 (329)
19 1miq_A Plasmepsin; aspartic pr 100.0 5.1E-55 1.7E-59 439.4 28.9 300 98-452 52-374 (375)
20 1oew_A Endothiapepsin; hydrola 100.0 1.9E-55 6.4E-60 435.6 24.9 296 109-451 13-329 (329)
21 2apr_A Rhizopuspepsin; hydrola 100.0 3.5E-55 1.2E-59 432.9 26.7 296 107-452 11-324 (325)
22 3pvk_A Candidapepsin-2; hydrol 100.0 3.2E-55 1.1E-59 436.4 26.0 301 98-454 3-333 (342)
23 1qdm_A Prophytepsin; aspartic 100.0 2.2E-54 7.4E-59 446.6 29.2 316 98-452 42-478 (478)
24 3qvc_A Histo-aspartic protease 100.0 1.8E-54 6.3E-59 443.3 26.4 301 97-452 126-449 (451)
25 2ewy_A Beta-secretase 2; BACE2 100.0 3E-54 1E-58 435.9 27.2 307 110-454 12-357 (383)
26 1yg9_A Aspartic protease BLA G 100.0 4.9E-54 1.7E-58 425.5 24.1 303 98-452 7-329 (330)
27 2qp8_A Beta-secretase 1; BACE1 100.0 1E-53 3.5E-58 433.5 26.8 309 110-454 20-369 (395)
28 3vf3_A Beta-secretase 1; struc 100.0 2.2E-53 7.6E-58 432.1 29.1 311 110-454 27-376 (402)
29 3lpj_A Beta-secretase 1; alzhe 100.0 1.4E-53 4.8E-58 439.9 28.0 312 109-454 72-422 (455)
30 1izd_A Aspartic proteinase; su 100.0 3.7E-53 1.3E-57 417.9 24.4 293 109-452 13-323 (323)
31 1ibq_A Aspergillopepsin; aspar 100.0 4.9E-53 1.7E-57 417.5 24.5 294 109-452 12-325 (325)
32 1wkr_A Polyporopepsin; hydrola 100.0 1.4E-52 4.7E-57 417.0 26.5 296 99-454 4-335 (340)
33 1bxo_A Protein (penicillopepsi 100.0 8E-53 2.7E-57 415.7 23.3 292 109-452 13-323 (323)
34 1b5f_A Protein (cardosin A); h 100.0 2.1E-42 7.1E-47 326.6 18.5 218 99-354 4-238 (239)
35 1lya_B Cathepsin D; lysosomal 100.0 6.3E-36 2.1E-40 282.7 19.2 215 219-452 3-241 (241)
36 1lya_A Cathepsin D; lysosomal 99.9 2.6E-23 8.8E-28 167.0 9.8 90 99-217 4-96 (97)
37 1b5f_B Protein (cardosin A); h 99.7 6.9E-17 2.4E-21 127.1 7.9 80 372-452 3-87 (87)
38 2i1a_A DNA damage-inducible pr 92.6 0.28 9.5E-06 41.2 7.0 108 301-449 25-134 (148)
39 3s8i_A Protein DDI1 homolog 1; 92.2 0.14 4.9E-06 43.3 4.6 110 302-451 24-135 (148)
40 2i1a_A DNA damage-inducible pr 90.6 0.37 1.3E-05 40.5 5.7 31 109-141 23-53 (148)
41 1fmb_A EIAV protease; hydrolas 82.7 1.2 4E-05 35.1 3.9 26 114-141 10-35 (104)
42 2hs1_A HIV-1 protease; ultra-h 81.8 1.3 4.6E-05 34.4 3.9 28 114-143 10-37 (99)
43 3liy_A Protease; hydrolase, hy 77.8 1.9 6.3E-05 34.3 3.5 31 114-144 12-45 (116)
44 3ec0_A Protease; HIV-2, inhibi 77.7 2.1 7E-05 33.3 3.7 27 114-142 10-36 (99)
45 2hah_A Protease, retropepsin; 73.2 2.9 0.0001 33.5 3.7 23 117-141 18-40 (116)
46 3sqf_A Protease; folded monome 68.5 4.9 0.00017 32.0 3.9 28 114-143 11-38 (114)
47 3s8i_A Protein DDI1 homolog 1; 62.2 6.3 0.00022 33.0 3.7 31 110-142 22-52 (148)
48 3slz_A GAG-Pro-POL polyprotein 53.0 12 0.0004 30.7 3.7 27 114-142 24-50 (132)
49 2rsp_A RSV protease; hydrolase 52.9 10 0.00035 30.6 3.3 23 119-143 27-49 (124)
50 3ka2_A [L-Ala51;Gly51']HIV-1 p 51.1 12 0.00041 33.0 3.7 26 114-141 10-35 (203)
51 1lya_A Cathepsin D; lysosomal 51.0 12 0.00041 28.6 3.4 40 291-343 5-44 (97)
52 1bxo_A Protein (penicillopepsi 41.9 23 0.0008 33.3 4.5 41 287-344 5-45 (323)
53 1izd_A Aspartic proteinase; su 40.2 26 0.00088 33.0 4.5 41 287-344 5-45 (323)
54 1ibq_A Aspergillopepsin; aspar 38.2 25 0.00085 33.1 4.1 32 300-344 13-44 (325)
55 1mpp_A Pepsin; hydrolase(acid 32.8 44 0.0015 31.8 4.9 45 286-343 5-49 (361)
56 3ka2_A [L-Ala51;Gly51']HIV-1 p 30.1 41 0.0014 29.5 3.7 27 114-142 114-140 (203)
57 3cms_A Chymosin B; hydrolase, 29.5 43 0.0015 31.4 4.2 43 288-343 3-45 (323)
58 2apr_A Rhizopuspepsin; hydrola 29.3 54 0.0018 30.7 4.8 33 300-343 14-46 (325)
59 1oew_A Endothiapepsin; hydrola 27.4 52 0.0018 30.9 4.3 33 300-343 14-46 (329)
60 3aup_A SBG7S, BG, basic 7S glo 26.4 50 0.0017 32.0 4.1 42 290-343 11-52 (403)
61 1wkr_A Polyporopepsin; hydrola 26.2 62 0.0021 30.5 4.6 39 290-342 4-42 (340)
62 3c9x_A Trichoderma reesei aspa 26.1 57 0.0019 30.6 4.3 34 300-344 14-47 (329)
63 3vla_A EDGP; extracellular, in 23.6 37 0.0013 33.3 2.5 44 288-343 8-51 (413)
64 1j71_A Candidapepsin, aspartic 22.9 62 0.0021 30.4 3.9 38 291-342 5-42 (334)
65 3fv3_A SAPP1P-secreted asparti 22.8 62 0.0021 30.4 3.9 40 290-343 4-43 (339)
66 1yg9_A Aspartic protease BLA G 21.5 47 0.0016 31.2 2.7 31 300-343 16-46 (330)
67 2qzx_A Candidapepsin-5; aspart 20.8 82 0.0028 29.6 4.3 32 300-342 11-42 (342)
68 1b5f_A Protein (cardosin A); h 20.0 92 0.0031 27.6 4.2 32 111-142 188-227 (239)
No 1
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A
Probab=100.00 E-value=1.8e-63 Score=506.33 Aligned_cols=341 Identities=24% Similarity=0.426 Sum_probs=283.6
Q ss_pred CCcceeccccCCccCcccEEEEEEeCCCCceEEEEEECCCceeeEeCCCccccccCCCCCCCCCCCCCccceecCCCccc
Q 012892 95 SDDATLPAKDGSVVGAGNYIVTVGIGTPKKDLSLIFDTGSDLTWTQCEPCVKYCYEQKEPKFDPTVSQSYSNVSCSSTIC 174 (454)
Q Consensus 95 ~~~~~~p~~~~~~~~~~~Y~~~i~iGtP~q~~~li~DTGS~~~Wv~~~~C~~~C~~~~~~~f~ps~SsT~~~~~C~~~~C 174 (454)
.+.+.+|++.+ ..+++|+++|+||||||++.|++||||+++||+|++| .+|+||+.++|.++.|
T Consensus 6 ~~~~~~pv~~d--~~~~~Y~~~i~iGTPpq~~~v~~DTGS~~lWv~c~~c--------------~~Sst~~~v~C~s~~C 69 (413)
T 3vla_A 6 PSALVVPVKKD--ASTLQYVTTINQRTPLVSENLVVDLGGRFLWVDCDQN--------------YVSSTYRPVRCRTSQC 69 (413)
T ss_dssp CSEEEEEEEEC--TTTCCEEEEEEETTTTEEEEEEEETTCSSEEEECSSS--------------CCCTTCEECBTTSHHH
T ss_pred CccEEEEeeec--CCCCeEEEEEEcCCCCcceEEEEeCCChhhhcccCCC--------------CCCCCcCccCCCcccc
Confidence 45678999865 5689999999999999999999999999999999865 3799999999999999
Q ss_pred cccccCCC------CCCCCCCCCceeeeEe-CCCCeEEEeEEEEEEEeCC--------CccccceeeeeeecC--CCCCC
Q 012892 175 TSLQSATG------NSPACASSTCLYGIQY-GDSSFSIGFFGKETLTLTP--------RDVFPNFLFGCGQNN--RGLFG 237 (454)
Q Consensus 175 ~~~~~~~~------~~~~c~~~~c~~~~~Y-gdgs~~~G~~~~Dtv~~~~--------~~~~~~~~FG~~~~~--~~~~~ 237 (454)
.....+.. ..+.|.++.|.|.+.| +|++.+.|++++|+|+|++ ...++++.|||++.+ .+.+.
T Consensus 70 ~~~~~~~~~~c~s~~~~~c~~~~c~~~i~Y~~d~~~~~G~l~~Dtv~l~~~~g~~~~~~~~v~~~~FGc~~~~~~~g~~~ 149 (413)
T 3vla_A 70 SLSGSIACGDCFNGPRPGCNNNTCGVFPENPVINTATGGEVAEDVVSVESTDGSSSGRVVTVPRFIFSCAPTSLLQNLAS 149 (413)
T ss_dssp HHTTCCEEECCSSCCBTTBCSSEEEECCEETTTTEECCEEEEEEEEEEEEECSSBEEEEEEEEEEEEEEECGGGGTTSCT
T ss_pred cccccCCCcccccCCCCCCCCCcCcceeecCcCCceeeeEEEEEEEEecccCCCCcccceeeCCEEEECcccccccCccc
Confidence 87654311 1235666789999999 5888899999999999972 147889999999986 45566
Q ss_pred CcceeeecCCCCCccceehhhhc--CCcEEEecCCCCCCCceEEeccCCC---------CC-eeeEecccCCCC------
Q 012892 238 GAAGLMGLGRDPISLVSQTATKY--KKLFSYCLPSSASSTGHLTFGPGAS---------KS-VQFTPLSSISGG------ 299 (454)
Q Consensus 238 ~~~GilGLg~~~~sl~~q~~~~~--~~~FS~~L~~~~~~~G~l~fGg~d~---------~~-~~~~pl~~~~~~------ 299 (454)
..+||||||++++|+++|+..+. +++|||||.+.....|+|+||+.+. ++ +.|+||+.++..
T Consensus 150 ~~dGIlGLg~~~lSl~sql~~~~~i~~~FS~cL~~~~~~~G~l~fGg~~~~~~p~~~~~g~~l~~tPl~~~~~~~~~~~~ 229 (413)
T 3vla_A 150 GVVGMAGLGRTRIALPSQFASAFSFKRKFAMCLSGSTSSNSVIIFGNDPYTFLPNIIVSDKTLTYTPLLTNPVSTSATST 229 (413)
T ss_dssp TCCEEEECSSSSSSHHHHHHHHHTCCSEEEEECCSCSSSCEEEEEESCCEEETTTEEECTTTSEEEECBCCSSCCSSSCC
T ss_pred ccccccccCCCCcchHHHHhhhcCCCceEEEeCCCCCCCceEEEECCCcccccccccccCCceeEeecccCCcccccccc
Confidence 79999999999999999998753 5899999998655689999999763 45 999999986432
Q ss_pred ----CccEEEEEeEEEECcEEeeecccccc-----CCCEEEcccccCccCCHhHHHHHHHHHHHhhh--cCCCCCCCccc
Q 012892 300 ----SSFYGLEMIGISVGGQKLSIAASVFT-----TAGTIIDSGTVITRLPPDAYTPLRTAFRQFMS--KYPTAPALSLL 368 (454)
Q Consensus 300 ----~~~y~v~l~~i~vg~~~~~~~~~~~~-----~~~~iiDSGT~~~~lp~~~~~~l~~~l~~~~~--~~~~~~~~~~~ 368 (454)
..+|+|+|++|+||++.+.+++..|. .+++||||||++++||+++|++|.++|.+++. .++...+...+
T Consensus 230 ~~~~~~~y~V~l~~IsVgg~~l~~~~~~~~~~~~g~~~aIiDSGTslt~lp~~~y~~l~~a~~~~~~~~~~~~~~~~~~~ 309 (413)
T 3vla_A 230 QGEPSVEYFIGVKSIKINSKIVALNTSLLSISSAGLGGTKISTINPYTVLETSIYKAVTEAFIKESAARNITRVASVAPF 309 (413)
T ss_dssp TTCCCCSCEECCCEEEETTEEECCCGGGTSBCTTSCBCEEECSSSSSEEEEHHHHHHHHHHHHHHHHHTTCCEECCCTTC
T ss_pred ccCCCceEEEEEEEEEECCEEccCCchhcccccCCCCCEEEECCCCcEEcCHHHHHHHHHHHHHHhcccCCCcCCCCCCC
Confidence 27999999999999999988866553 25799999999999999999999999999875 33333334457
Q ss_pred cccccccCCcc----cccCeEEEEEcC-CcEEEEcCCCcEEEeCCCeEEEEEEeCCC-CCCceeechhhhceeEEEEECC
Q 012892 369 DTCYDFSKYST----VTLPQISLFFSG-GVEVSVDKTGIMYASNISQVCLAFAGNSD-PTDVSIFGNTQQHTLEVVYDVA 442 (454)
Q Consensus 369 ~~Cy~~~~~~~----~~~P~i~~~f~g-g~~~~l~~~~~~~~~~~~~~C~~~~~~~~-~~~~~IlG~~fl~~~~vvfD~~ 442 (454)
+.||+.++... ..+|+|+|+|+| +++++|++++|+++.+.+..|++|...+. ..+.||||+.|||++|+|||++
T Consensus 310 ~~C~~~~~~~~~~~~~~lP~i~f~f~g~~~~~~l~~~~y~~~~~~~~~Cl~~~~~~~~~~~~~IlGd~fl~~~~vvfD~~ 389 (413)
T 3vla_A 310 GACFSTDNILSTRLGPSVPSIDLVLQSESVVWTITGSNSMVYINDNVVCLGVVDGGSNLRTSIVIGGHQLEDNLVQFDLA 389 (413)
T ss_dssp SCEEECTTCCEETTEECCCCEEEECSSTTCEEEECHHHHEEEEETTEEEECEEEEESSCSSSEEECHHHHTTEEEEEETT
T ss_pred cceeccCCccccccccCCCcEEEEEcCCcEEEEeCccceEEEeCCCcEEEEEEecCCCcccceeEehhhhcCeEEEEECC
Confidence 78999875432 479999999965 48999999999998766789998887532 2358999999999999999999
Q ss_pred CCEEEEEeC
Q 012892 443 GGKVGFAAG 451 (454)
Q Consensus 443 ~~rigfa~~ 451 (454)
++|||||++
T Consensus 390 ~~riGfa~~ 398 (413)
T 3vla_A 390 TSRVGFSGT 398 (413)
T ss_dssp TTEEEEEEE
T ss_pred CCEEEEEEe
Confidence 999999984
No 2
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max}
Probab=100.00 E-value=2.2e-59 Score=476.25 Aligned_cols=337 Identities=23% Similarity=0.431 Sum_probs=269.1
Q ss_pred cceeccccCCccCcccEEEEEEeCCCCceEEEEEECCCceeeEeCCCccccccCCCCCCCCCCCCCccceecCCCccccc
Q 012892 97 DATLPAKDGSVVGAGNYIVTVGIGTPKKDLSLIFDTGSDLTWTQCEPCVKYCYEQKEPKFDPTVSQSYSNVSCSSTICTS 176 (454)
Q Consensus 97 ~~~~p~~~~~~~~~~~Y~~~i~iGtP~q~~~li~DTGS~~~Wv~~~~C~~~C~~~~~~~f~ps~SsT~~~~~C~~~~C~~ 176 (454)
.+.+|+.. +..+++|+++|.||||||++.|+|||||+++||+|.+| .+|+||+.++|.++.|..
T Consensus 9 ~~~~pl~~--~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~~--------------~~Sst~~~~~C~s~~C~~ 72 (403)
T 3aup_A 9 LVVLPVQN--DGSTGLHWANLQKRTPLMQVPVLVDLNGNHLWVNCEQQ--------------YSSKTYQAPFCHSTQCSR 72 (403)
T ss_dssp CEEEEEEE--CTTTCCEEEEEEETTTTEEEEEEEETTCSSEEEECSSC--------------CCCSSCBCCCTTBHHHHH
T ss_pred cEEEeeec--CCCCceEEEEEECCCCCceeEEEEECCCCceeECCCCC--------------CCCCCCCccCCCCccccC
Confidence 45688873 24678999999999999999999999999999998864 379999999999999987
Q ss_pred cccC------CCCCCCCCCCCceeeeEeC-CCCeEEEeEEEEEEEeCCC----------ccccceeeeeeecCC---CCC
Q 012892 177 LQSA------TGNSPACASSTCLYGIQYG-DSSFSIGFFGKETLTLTPR----------DVFPNFLFGCGQNNR---GLF 236 (454)
Q Consensus 177 ~~~~------~~~~~~c~~~~c~~~~~Yg-dgs~~~G~~~~Dtv~~~~~----------~~~~~~~FG~~~~~~---~~~ 236 (454)
...+ ....+.|..+.|.|.+.|+ |++.+.|.+++|+|+|++. ..++++.|||++... +.+
T Consensus 73 ~~~~~c~~c~~~~~s~~~~~~~~~~~~Y~~d~~~~~G~~~~Dtv~ig~~~g~~~~~~~~~~v~~~~Fg~~~~~~~~~~~~ 152 (403)
T 3aup_A 73 ANTHQCLSCPAASRPGCHKNTCGLMSTNPITQQTGLGELGEDVLAIHATQGSTQQLGPLVTVPQFLFSCAPSFLVQKGLP 152 (403)
T ss_dssp TTCCCEEECSSSCBTTBCSSEEEEEEEETTTTEEEEEEEEEEEEEEEECCC----CCCEEEEEEEEEEEECGGGGSSSSS
T ss_pred ccccCccccCCCCCCCCCCCcceeEeecCCCCceeeEEEEEEEEEecccCCccccccccccccCEEEECCcccccccCCC
Confidence 6543 1122457667899999998 7888999999999999862 478899999999864 334
Q ss_pred CCcceeeecCCCCCccceehhhh--cCCcEEEecCCCCCCCceEEeccCCC-------C-----CeeeEecccCCCCCcc
Q 012892 237 GGAAGLMGLGRDPISLVSQTATK--YKKLFSYCLPSSASSTGHLTFGPGAS-------K-----SVQFTPLSSISGGSSF 302 (454)
Q Consensus 237 ~~~~GilGLg~~~~sl~~q~~~~--~~~~FS~~L~~~~~~~G~l~fGg~d~-------~-----~~~~~pl~~~~~~~~~ 302 (454)
...+||||||++++++++|+... .+++||+||.+..+..|.|+||| |+ + ++.|+|++.++ ..+
T Consensus 153 ~~~dGIlGLg~~~~s~~~ql~~~~~~~~~FS~~L~~~~~~~G~l~fGg-d~~~~~~~~G~~~~~~l~~~Pl~~~~--~~~ 229 (403)
T 3aup_A 153 RNTQGVAGLGHAPISLPNQLASHFGLQRQFTTCLSRYPTSKGAIIFGD-APNNMRQFQNQDIFHDLAFTPLTITL--QGE 229 (403)
T ss_dssp TTCCEEEECSSSTTSHHHHHHHHHTCCSEEEEECCSCTTSCEEEEESC-HHHHC--CTTCCTTTTEEEEECEECT--TSC
T ss_pred CCCceEEECCCCCcCHHHHHHhhcCCCCeEEEEcCCCCCCCeeEEECC-CchhccccccccccCceeecccccCC--CCc
Confidence 57899999999999999998654 26899999998655689999999 52 3 89999999853 369
Q ss_pred EEEEEeEEEECcEEe-eecccccc-----CCCEEEcccccCccCCHhHHHHHHHHHHHhhhcCCCCCCCccccccccccC
Q 012892 303 YGLEMIGISVGGQKL-SIAASVFT-----TAGTIIDSGTVITRLPPDAYTPLRTAFRQFMSKYPTAPALSLLDTCYDFSK 376 (454)
Q Consensus 303 y~v~l~~i~vg~~~~-~~~~~~~~-----~~~~iiDSGT~~~~lp~~~~~~l~~~l~~~~~~~~~~~~~~~~~~Cy~~~~ 376 (454)
|.|+|++|+|+++.+ .++...+. .+++||||||++++||+++|++|+++|.+++..++.......++.||+ |
T Consensus 230 y~v~l~~i~v~g~~~~~~~~~~~~~~~~g~~~aiiDSGTt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~c~~--c 307 (403)
T 3aup_A 230 YNVRVNSIRINQHSVFPLNKISSTIVGSTSGGTMISTSTPHMVLQQSVYQAFTQVFAQQLPKQAQVKSVAPFGLCFN--S 307 (403)
T ss_dssp EEECEEEEEETTEEEECC------------CCEEECSSCSSEEECHHHHHHHHHHHHHTSCGGGEECCCTTCSCEEC--G
T ss_pred ceEEEEEEEECCEEcccCChhHeeeccCCCCCEEEECCCccEEeCHHHHHHHHHHHHHHhccccccCCCCCCCceEE--C
Confidence 999999999999998 66655442 257999999999999999999999999877543222111223456875 3
Q ss_pred CcccccCeEEEEEcCC--cEEEEcCCCcEEEeCCCeEEEEEEeCCCC-CCceeechhhhceeEEEEECCCCEEEE-----
Q 012892 377 YSTVTLPQISLFFSGG--VEVSVDKTGIMYASNISQVCLAFAGNSDP-TDVSIFGNTQQHTLEVVYDVAGGKVGF----- 448 (454)
Q Consensus 377 ~~~~~~P~i~~~f~gg--~~~~l~~~~~~~~~~~~~~C~~~~~~~~~-~~~~IlG~~fl~~~~vvfD~~~~rigf----- 448 (454)
.....+|+|+|+|.|+ ++++|++++|+++...+..|++|...+.. .+.||||+.|||++|+|||++++||||
T Consensus 308 ~~~~~~P~i~f~f~g~~~~~~~l~~~~y~~~~~~~~~C~~~~~~~~~~~~~~ILG~~fl~~~yvvfD~~~~rIGf~A~~~ 387 (403)
T 3aup_A 308 NKINAYPSVDLVMDKPNGPVWRISGEDLMVQAQPGVTCLGVMNGGMQPRAEITLGARQLEENLVVFDLARSRVGFSTSSL 387 (403)
T ss_dssp GGCCCCCCEEEEESSTTCCEEEECHHHHEEEC---CEEECEEECCSCCSSSEEECHHHHTTSCEEEETTTTEEEEESSCG
T ss_pred CCcCcCCcEEEEEcCCCceEEEEcccceEEEcCCCeEEEEEEcCCCCCCCcEEEChHHhcCeEEEEECCCCEEEEecccc
Confidence 3334789999999655 69999999999987656789998876431 357999999999999999999999999
Q ss_pred --EeCCCC
Q 012892 449 --AAGGCS 454 (454)
Q Consensus 449 --a~~~C~ 454 (454)
++++|+
T Consensus 388 ~~~~~~C~ 395 (403)
T 3aup_A 388 HSHGVKCA 395 (403)
T ss_dssp GGGTCCGG
T ss_pred cccCCCcc
Confidence 778884
No 3
>3psg_A Pepsinogen; hydrolase(acid proteinase zymogen); 1.65A {Sus scrofa} SCOP: b.50.1.2 PDB: 2psg_A 4pep_A* 3pep_A* 1f34_A* 1psa_A* 1yx9_A 5pep_A 1flh_A 1qrp_E* 1psn_A* 1pso_E* 3utl_A
Probab=100.00 E-value=3.8e-58 Score=461.34 Aligned_cols=305 Identities=25% Similarity=0.414 Sum_probs=250.4
Q ss_pred cceeccccCCccCcccEEEEEEeCCCCceEEEEEECCCceeeEeCCCcc-ccccCCCCCCCCCCCCCccceecCCCcccc
Q 012892 97 DATLPAKDGSVVGAGNYIVTVGIGTPKKDLSLIFDTGSDLTWTQCEPCV-KYCYEQKEPKFDPTVSQSYSNVSCSSTICT 175 (454)
Q Consensus 97 ~~~~p~~~~~~~~~~~Y~~~i~iGtP~q~~~li~DTGS~~~Wv~~~~C~-~~C~~~~~~~f~ps~SsT~~~~~C~~~~C~ 175 (454)
....|+. ++.+.+|+++|+||||||++.|++||||+++||+|..|. ..|..+ +.|||++|+||+...
T Consensus 45 ~~~~~l~---n~~d~~Y~~~i~iGTPpQ~~~v~~DTGSs~lWV~s~~C~~~~C~~~--~~y~~~~SsT~~~~~------- 112 (370)
T 3psg_A 45 IGDEPLE---NYLDTEYFGTIGIGTPAQDFTVIFDTGSSNLWVPSVYCSSLACSDH--NQFNPDDSSTFEATS------- 112 (370)
T ss_dssp SCCCTTG---GGTTCCEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSGGGTTS--CCBCGGGCTTCEEEE-------
T ss_pred cceecce---eccCCEEEEEEEEcCCCCEEEEEEeCCCCccEEECCCCCCcccCCC--CCCCCccCcCcEECC-------
Confidence 3456765 456889999999999999999999999999999999994 357654 899999999999975
Q ss_pred ccccCCCCCCCCCCCCceeeeEeCCCCeEEEeEEEEEEEeCCCccccceeeeeeecCCC-CC--CCcceeeecCCCCCcc
Q 012892 176 SLQSATGNSPACASSTCLYGIQYGDSSFSIGFFGKETLTLTPRDVFPNFLFGCGQNNRG-LF--GGAAGLMGLGRDPISL 252 (454)
Q Consensus 176 ~~~~~~~~~~~c~~~~c~~~~~Ygdgs~~~G~~~~Dtv~~~~~~~~~~~~FG~~~~~~~-~~--~~~~GilGLg~~~~sl 252 (454)
|.|.+.|++|+ +.|.+++|+|+|++ ..++++.|||++...+ .+ ...+||||||++.++.
T Consensus 113 ----------------~~~~i~Yg~Gs-~~G~~~~Dtv~ig~-~~v~~~~Fg~a~~~~~~~~~~~~~dGIlGLg~~~~s~ 174 (370)
T 3psg_A 113 ----------------QELSITYGTGS-MTGILGYDTVQVGG-ISDTNQIFGLSETEPGSFLYYAPFDGILGLAYPSISA 174 (370)
T ss_dssp ----------------EEEEEESSSCE-EEEEEEEEEEEETT-EEEEEEEEEEECSCCCGGGGGCSCSEEEECSCGGGCG
T ss_pred ----------------cEEEEEeCCce-EEEEEEEEEEeeCC-cccCCeEEEEEEeecccccccCCccceeccCCccccc
Confidence 69999999997 89999999999998 7999999999998866 22 3689999999987763
Q ss_pred ------ceehhhh---cCCcEEEecCCCCCCCceEEeccCCC----CCeeeEecccCCCCCccEEEEEeEEEECcEEeee
Q 012892 253 ------VSQTATK---YKKLFSYCLPSSASSTGHLTFGPGAS----KSVQFTPLSSISGGSSFYGLEMIGISVGGQKLSI 319 (454)
Q Consensus 253 ------~~q~~~~---~~~~FS~~L~~~~~~~G~l~fGg~d~----~~~~~~pl~~~~~~~~~y~v~l~~i~vg~~~~~~ 319 (454)
..++..+ .+++||+||.+.....|.|+|||+|+ +++.|+|+.. +.+|.|.|++|+|+++.+..
T Consensus 175 ~~~~~~~~~l~~qg~i~~~~FS~~L~~~~~~~G~l~fGg~D~~~y~g~l~~~pv~~----~~~w~v~l~~i~v~g~~~~~ 250 (370)
T 3psg_A 175 SGATPVFDNLWDQGLVSQDLFSVYLSSNDDSGSVVLLGGIDSSYYTGSLNWVPVSV----EGYWQITLDSITMDGETIAC 250 (370)
T ss_dssp GGCCCHHHHHHHTTCSSSSEEEEEEC-----CEEEEETCCCGGGBSSCCEEEECSE----ETTEEEEECEEESSSSEEEC
T ss_pred cCCCCHHHHHHHCCCCCCCEEEEEEccCCCCCeEEEEEeeChHhcCCcceeecccc----cceeEEEEeEEEECCEEEec
Confidence 2333332 16899999998755689999999984 7999999987 68999999999999988764
Q ss_pred ccccccCCCEEEcccccCccCCHhHHHHHHHHHHHhhhcCCCCCCCccccccccccCCcccccCeEEEEEcCCcEEEEcC
Q 012892 320 AASVFTTAGTIIDSGTVITRLPPDAYTPLRTAFRQFMSKYPTAPALSLLDTCYDFSKYSTVTLPQISLFFSGGVEVSVDK 399 (454)
Q Consensus 320 ~~~~~~~~~~iiDSGT~~~~lp~~~~~~l~~~l~~~~~~~~~~~~~~~~~~Cy~~~~~~~~~~P~i~~~f~gg~~~~l~~ 399 (454)
... ..+||||||+++++|++++++|.+++++.. ...+ +|.++|.....+|+|+|+| ||.+++||+
T Consensus 251 ~~~----~~aiiDTGTs~~~lP~~~~~~i~~~i~a~~----~~~g------~~~v~C~~~~~lP~i~f~~-~g~~~~l~~ 315 (370)
T 3psg_A 251 SGG----CQAIVDTGTSLLTGPTSAIANIQSDIGASE----NSDG------EMVISCSSIDSLPDIVFTI-DGVQYPLSP 315 (370)
T ss_dssp TTC----EEEEECTTCCSEEEEHHHHHHHHHHTTCEE----CTTC------CEECCGGGGGGCCCEEEEE-TTEEEEECH
T ss_pred CCC----ceEEEcCCCCcEECCHHHHHHHHHHhCCcc----cCCC------cEEEECCCcccCCcEEEEE-CCEEEEECH
Confidence 322 469999999999999999999999987652 1111 3555666666799999999 789999999
Q ss_pred CCcEEEeCCCeEEE-EEEeCCC---CCCceeechhhhceeEEEEECCCCEEEEEeCC
Q 012892 400 TGIMYASNISQVCL-AFAGNSD---PTDVSIFGNTQQHTLEVVYDVAGGKVGFAAGG 452 (454)
Q Consensus 400 ~~~~~~~~~~~~C~-~~~~~~~---~~~~~IlG~~fl~~~~vvfD~~~~rigfa~~~ 452 (454)
++|+++ .+..|+ +|.+.+. .+..||||++|||++|+|||++++|||||++.
T Consensus 316 ~~yi~~--~~~~C~~~~~~~~~~~~~~~~~ILG~~Fl~~~y~vfD~~~~riGfA~a~ 370 (370)
T 3psg_A 316 SAYILQ--DDDSCTSGFEGMDVPTSSGELWILGDVFIRQYYTVFDRANNKVGLAPVA 370 (370)
T ss_dssp HHHEEE--CSSCEEESEEEECCCTTSCCEEEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred HHhccc--CCCEEEEEEEeCCCCCCCCCcEEeChHHhcceEEEEECCCCEEEEEEcC
Confidence 999998 345699 5765421 23479999999999999999999999999974
No 4
>2x0b_A Renin; hydrolase-hormone complex, hydrolase hormone complex, vasoconstrictor, glycoprotein, hypertension, serpins; 4.33A {Homo sapiens}
Probab=100.00 E-value=1.8e-57 Score=457.52 Aligned_cols=303 Identities=21% Similarity=0.376 Sum_probs=251.1
Q ss_pred ceeccccCCccCcccEEEEEEeCCCCceEEEEEECCCceeeEeCCCcc---ccccCCCCCCCCCCCCCccceecCCCccc
Q 012892 98 ATLPAKDGSVVGAGNYIVTVGIGTPKKDLSLIFDTGSDLTWTQCEPCV---KYCYEQKEPKFDPTVSQSYSNVSCSSTIC 174 (454)
Q Consensus 98 ~~~p~~~~~~~~~~~Y~~~i~iGtP~q~~~li~DTGS~~~Wv~~~~C~---~~C~~~~~~~f~ps~SsT~~~~~C~~~~C 174 (454)
..+|+. ++.+.+|+++|+||||||++.|++||||+++||+|..|. ..|..+ +.|||++|+||+...
T Consensus 51 ~~~~l~---n~~~~~Y~~~I~IGTP~Q~f~vi~DTGSs~lWV~s~~C~~~~~~C~~~--~~y~~~~SsT~~~~~------ 119 (383)
T 2x0b_A 51 SSVILT---NYMDTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSSKCSRLYTACVYH--KLFDASDSSSYKHNG------ 119 (383)
T ss_dssp CEEEEE---EETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTSCTTSHHHHTS--CCBCGGGCTTCEEEE------
T ss_pred ceEeee---ecCCCEEEEEEEECCCCcEEEEEEeCCCCCeEEeccCCCCCcccccCC--CCCCCCCCCcEEECC------
Confidence 357776 356789999999999999999999999999999999995 369866 899999999999875
Q ss_pred cccccCCCCCCCCCCCCceeeeEeCCCCeEEEeEEEEEEEeCCCccccceeeeeeecCCC-C--CCCcceeeecCCCCCc
Q 012892 175 TSLQSATGNSPACASSTCLYGIQYGDSSFSIGFFGKETLTLTPRDVFPNFLFGCGQNNRG-L--FGGAAGLMGLGRDPIS 251 (454)
Q Consensus 175 ~~~~~~~~~~~~c~~~~c~~~~~Ygdgs~~~G~~~~Dtv~~~~~~~~~~~~FG~~~~~~~-~--~~~~~GilGLg~~~~s 251 (454)
|.|.+.|++|+ +.|.+++|+|+|++ ..++ +.|||++...+ . ....+||||||++.++
T Consensus 120 -----------------~~~~i~Yg~Gs-~~G~~~~Dtv~ig~-~~v~-~~Fg~a~~~~g~~f~~~~~dGIlGLg~~~~s 179 (383)
T 2x0b_A 120 -----------------TELTLRYSTGT-VSGFLSQDIITVGG-ITVT-QMFGEVTEMPALPFMLAEFDGVVGMGFIEQA 179 (383)
T ss_dssp -----------------EEEEEECSSCE-EEEEEEEEEEEETT-EEEE-EEEEEEEECCHHHHTTCSSSEEEECSCGGGC
T ss_pred -----------------cEEEEEcCCcc-EEEEEEeeEEEEcC-ceEE-EEEEEEEecCCcccccCCCceEeccCCCccc
Confidence 69999999997 89999999999998 6888 99999998765 2 2368999999999876
Q ss_pred c----------ceehhhhcCCcEEEecCCCCCC----CceEEeccCCC----CCeeeEecccCCCCCccEEEEEeEEEEC
Q 012892 252 L----------VSQTATKYKKLFSYCLPSSASS----TGHLTFGPGAS----KSVQFTPLSSISGGSSFYGLEMIGISVG 313 (454)
Q Consensus 252 l----------~~q~~~~~~~~FS~~L~~~~~~----~G~l~fGg~d~----~~~~~~pl~~~~~~~~~y~v~l~~i~vg 313 (454)
. ++|.... +++||+||.+.... .|.|+|||+|+ +++.|+|+.. ..+|.|.|++|+|+
T Consensus 180 ~~~~~~~~~~l~~qg~i~-~~~FS~~L~~~~~~~~~~~G~l~fGg~d~~~y~G~l~~~pv~~----~~~w~v~l~~i~v~ 254 (383)
T 2x0b_A 180 IGRVTPIFDNIISQGVLK-EDVFSFYYNRDSENSQSLGGQIVLGGSDPQHYEGNFHYINLIK----TGVWQIQMKGVSVG 254 (383)
T ss_dssp GGGCCCHHHHHHTTTCCS-SSEEEEEECCSCC----CCEEEEESSCCGGGEEEEEEEEEBSS----TTSCEEEECEEEES
T ss_pred cCCCCcHHHHHHhCCCCC-CCEEEEEEcCCCCcccCCCcEEEECCcChHHcCCceEEEEcCC----CceEEEEEeEEEeC
Confidence 3 3443332 69999999986443 89999999985 6899999987 67999999999999
Q ss_pred cEEeeeccccccCCCEEEcccccCccCCHhHHHHHHHHHHHhhhcCCCCCCCccccccccccCCcccccCeEEEEEcCCc
Q 012892 314 GQKLSIAASVFTTAGTIIDSGTVITRLPPDAYTPLRTAFRQFMSKYPTAPALSLLDTCYDFSKYSTVTLPQISLFFSGGV 393 (454)
Q Consensus 314 ~~~~~~~~~~~~~~~~iiDSGT~~~~lp~~~~~~l~~~l~~~~~~~~~~~~~~~~~~Cy~~~~~~~~~~P~i~~~f~gg~ 393 (454)
++.+..... ..+||||||+++++|++++++|.+++++.. ..+.+ ...|+ ....+|+|+|+| +|.
T Consensus 255 ~~~~~~~~~----~~aiiDTGTs~~~lP~~~~~~i~~~i~a~~-----~~g~~-~v~C~-----~~~~~P~i~f~~-~g~ 318 (383)
T 2x0b_A 255 SSTLLCEDG----CLALVDTGASYISGSTSSIEKLMEALGAKK-----RLFDY-VVKCN-----EGPTLPDISFHL-GGK 318 (383)
T ss_dssp SCCCBSTTC----EEEEECTTCSSEEECHHHHHHHHHHHTCEE-----CSSCE-EEEGG-----GTTTCCCEEEEE-TTE
T ss_pred CceEEcCCC----cEEEEcCCCceEEcCHHHHHHHHHHhCCcc-----cCCcE-EEecc-----ccccCceEEEEE-CCE
Confidence 987532211 469999999999999999999999997652 22222 22354 345789999999 789
Q ss_pred EEEEcCCCcEEEeCC--CeEEE-EEEeCC---CCCCceeechhhhceeEEEEECCCCEEEEEeCC
Q 012892 394 EVSVDKTGIMYASNI--SQVCL-AFAGNS---DPTDVSIFGNTQQHTLEVVYDVAGGKVGFAAGG 452 (454)
Q Consensus 394 ~~~l~~~~~~~~~~~--~~~C~-~~~~~~---~~~~~~IlG~~fl~~~~vvfD~~~~rigfa~~~ 452 (454)
+++|++++|+++... +..|+ +|...+ ...+.||||++|||++|+|||++++|||||+++
T Consensus 319 ~~~l~~~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~~ILGd~Fl~~~y~vfD~~~~rIGfA~a~ 383 (383)
T 2x0b_A 319 EYTLTSADYVFQESYSSKKLCTLAIHAMDIPPPTGPTWALGATFIRKFYTEFDRRNNRIGFALAR 383 (383)
T ss_dssp EEEECHHHHBCCCCCCTTSEEEBSEEECCCCTTTCSCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred EEEECHHHhEeeccCCCCCeEEEEEEecccCCCCCCcEEEChHHhcceEEEEECCCCEEeEEEcC
Confidence 999999999988642 46899 787653 134689999999999999999999999999874
No 5
>1tzs_A Cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens}
Probab=100.00 E-value=8.3e-57 Score=449.17 Aligned_cols=308 Identities=23% Similarity=0.423 Sum_probs=249.7
Q ss_pred cceeccccCCccCcccEEEEEEeCCCCceEEEEEECCCceeeEeCCCcc-ccccCCCCCCCCCCCCCccceecCCCcccc
Q 012892 97 DATLPAKDGSVVGAGNYIVTVGIGTPKKDLSLIFDTGSDLTWTQCEPCV-KYCYEQKEPKFDPTVSQSYSNVSCSSTICT 175 (454)
Q Consensus 97 ~~~~p~~~~~~~~~~~Y~~~i~iGtP~q~~~li~DTGS~~~Wv~~~~C~-~~C~~~~~~~f~ps~SsT~~~~~C~~~~C~ 175 (454)
...+|+.+ ..+.+|+++|.||||||++.|++||||+++||+|..|. ..|..+ +.|||++|+||+...
T Consensus 12 ~~~~~l~n---~~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~lWv~~~~C~~~~C~~~--~~y~~~~SsT~~~~~------- 79 (351)
T 1tzs_A 12 SAKEPLIN---YLDMEYFGTISIGSPPQNFTVIFDTGSSNLWVPSVYCTSPACKTH--SRFQPSQSSTYSQPG------- 79 (351)
T ss_dssp --CCTTGG---GSSSCCCEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSGGGTTS--CCBCGGGCTTCBCCS-------
T ss_pred ccceecee---cCCCEEEEEEEECCCCeEEEEEEeCCCcceEEecCCCCccccCCC--CcCCcccCcceEECC-------
Confidence 34567763 45789999999999999999999999999999999995 368755 899999999998863
Q ss_pred ccccCCCCCCCCCCCCceeeeEeCCCCeEEEeEEEEEEEeCCCccccceeeeeeecCCCC-C--CCcceeeecCCCCCcc
Q 012892 176 SLQSATGNSPACASSTCLYGIQYGDSSFSIGFFGKETLTLTPRDVFPNFLFGCGQNNRGL-F--GGAAGLMGLGRDPISL 252 (454)
Q Consensus 176 ~~~~~~~~~~~c~~~~c~~~~~Ygdgs~~~G~~~~Dtv~~~~~~~~~~~~FG~~~~~~~~-~--~~~~GilGLg~~~~sl 252 (454)
|.|.+.|++|+ +.|.+++|+|+|++ ..++++.|||++...+. + ...+||||||++.++.
T Consensus 80 ----------------~~~~i~Yg~Gs-~~G~~~~D~v~ig~-~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~ 141 (351)
T 1tzs_A 80 ----------------QSFSIQYGTGS-LSGIIGADQVSVEG-LTVVGQQFGESVTEPGQTFVDAEFDGILGLGYPSLAV 141 (351)
T ss_dssp ----------------CEEEEESSSCE-EEEEEEEEEEEETT-EEEEEEEEEEECSCCCGGGGGCSCSEEEECSCGGGSG
T ss_pred ----------------CEEEEEeCCCC-eEEEEEEeEEEECC-eEECCeEEEEEEeccccccccCCCceEEecCCccccc
Confidence 69999999997 78999999999998 68999999999987662 2 3689999999988763
Q ss_pred ------ceehhhh---cCCcEEEecCCCCCC--CceEEeccCCC----CCeeeEecccCCCCCccEEEEEeEEEECcEEe
Q 012892 253 ------VSQTATK---YKKLFSYCLPSSASS--TGHLTFGPGAS----KSVQFTPLSSISGGSSFYGLEMIGISVGGQKL 317 (454)
Q Consensus 253 ------~~q~~~~---~~~~FS~~L~~~~~~--~G~l~fGg~d~----~~~~~~pl~~~~~~~~~y~v~l~~i~vg~~~~ 317 (454)
+.|+..+ .+++||+||.+.... .|.|+|||+|+ +++.|+|+.. ..+|.|.|++|+|+++.+
T Consensus 142 ~~~~~~~~~l~~qg~i~~~~FS~~L~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~----~~~~~v~l~~i~v~~~~~ 217 (351)
T 1tzs_A 142 GGVTPVFDNMMAQNLVDLPMFSVYMSSNPEGGAGSELIFGGYDHSHFSGSLNWVPVTK----QAYWQIALDNIQVGGTVM 217 (351)
T ss_dssp GGCCCHHHHHHHTTCCSSSEEEEECCCCC--CTTCEEEETSCCGGGBCSCCEEEECSE----ETTEEEEEEEEEETTEEE
T ss_pred cCCCcHHHHHHHCCCCCCCEEEEEEcCCCCCCCCCEEEECCCCHHHcCCceEEEecCC----CceEEEEeCEEEECCceE
Confidence 3334333 169999999987543 89999999884 7899999987 679999999999999886
Q ss_pred eeccccccCCCEEEcccccCccCCHhHHHHHHHHHHHhhhcCCCCCCCccccccccccCCcccccCeEEEEEcCCcEEEE
Q 012892 318 SIAASVFTTAGTIIDSGTVITRLPPDAYTPLRTAFRQFMSKYPTAPALSLLDTCYDFSKYSTVTLPQISLFFSGGVEVSV 397 (454)
Q Consensus 318 ~~~~~~~~~~~~iiDSGT~~~~lp~~~~~~l~~~l~~~~~~~~~~~~~~~~~~Cy~~~~~~~~~~P~i~~~f~gg~~~~l 397 (454)
..... ..+||||||++++||++++++|.+++++.. .. +. ....|+ ....+|+|+|+| +|++++|
T Consensus 218 ~~~~~----~~aiiDSGTs~~~lP~~~~~~l~~~~~~~~---~~--g~-~~~~C~-----~~~~~P~i~f~f-~g~~~~i 281 (351)
T 1tzs_A 218 FCSEG----CQAIVDTGTSLITGPSDKIKQLQNAIGAAP---VD--GE-YAVECA-----NLNVMPDVTFTI-NGVPYTL 281 (351)
T ss_dssp ECTTC----EEEEECTTCSSEEECHHHHHHHHHHHTCEE---CS--SS-EEECGG-----GGGGSCCEEEEE-TTEEEEE
T ss_pred EcCCC----ceEEeccCCcceeCCHHHHHHHHHHhCCcc---cC--Ce-EEEeCC-----CCccCCcEEEEE-CCEEEEE
Confidence 43221 459999999999999999999999987652 11 22 222454 345689999999 7899999
Q ss_pred cCCCcEEEeCC--CeEEE-EEEeCC---CCCCceeechhhhceeEEEEECCCCEEEEEeCCCC
Q 012892 398 DKTGIMYASNI--SQVCL-AFAGNS---DPTDVSIFGNTQQHTLEVVYDVAGGKVGFAAGGCS 454 (454)
Q Consensus 398 ~~~~~~~~~~~--~~~C~-~~~~~~---~~~~~~IlG~~fl~~~~vvfD~~~~rigfa~~~C~ 454 (454)
++++|+++... +..|+ +|.+.+ ...+.||||+.|||++|+|||++++|||||+++|.
T Consensus 282 ~~~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~rigfA~~~~~ 344 (351)
T 1tzs_A 282 SPTAYTLLDFVDGMQFCSSGFQGLDIHPPAGPLWILGDVFIRQFYSVFDRGNNRVGLAPAVPW 344 (351)
T ss_dssp CTTTSEECC-----CCEEESEEECCCCTTTCSCEEECHHHHHHEEEEEETTTTEEEEEEBC--
T ss_pred CHHHhEeeccCCCCCeEEEEEEECCCCCCCCCeEEEChHHhhheEEEEECCCCEEEEEECCcc
Confidence 99999987542 46899 687653 13468999999999999999999999999999983
No 6
>1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A*
Probab=100.00 E-value=1.6e-56 Score=443.28 Aligned_cols=302 Identities=23% Similarity=0.441 Sum_probs=251.9
Q ss_pred eeccccCCccCcccEEEEEEeCCCCceEEEEEECCCceeeEeCCCccc-cccCCCCCCCCCCCCCccceecCCCcccccc
Q 012892 99 TLPAKDGSVVGAGNYIVTVGIGTPKKDLSLIFDTGSDLTWTQCEPCVK-YCYEQKEPKFDPTVSQSYSNVSCSSTICTSL 177 (454)
Q Consensus 99 ~~p~~~~~~~~~~~Y~~~i~iGtP~q~~~li~DTGS~~~Wv~~~~C~~-~C~~~~~~~f~ps~SsT~~~~~C~~~~C~~~ 177 (454)
++|+. ++.+.+|+++|.||||||++.|++||||+++||+|.+|.. .|..+ +.|||++|+||+...
T Consensus 4 ~~~l~---~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C~~~~C~~~--~~y~~~~SsT~~~~~--------- 69 (329)
T 1dpj_A 4 DVPLT---NYLNAQYYTDITLGTPPQNFKVILDTGSSNLWVPSNECGSLACFLH--SKYDHEASSSYKANG--------- 69 (329)
T ss_dssp EEECE---EETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSHHHHTS--CCBCGGGCTTCEEEE---------
T ss_pred ceeee---ecCCCEEEEEEEECCCCcEEEEEEeCCCcCeEEecCCCCCcccCCc--CcCCcccCcCeEECC---------
Confidence 56776 3457899999999999999999999999999999999953 58765 799999999998864
Q ss_pred ccCCCCCCCCCCCCceeeeEeCCCCeEEEeEEEEEEEeCCCccccceeeeeeecCCC-C--CCCcceeeecCCCCCccc-
Q 012892 178 QSATGNSPACASSTCLYGIQYGDSSFSIGFFGKETLTLTPRDVFPNFLFGCGQNNRG-L--FGGAAGLMGLGRDPISLV- 253 (454)
Q Consensus 178 ~~~~~~~~~c~~~~c~~~~~Ygdgs~~~G~~~~Dtv~~~~~~~~~~~~FG~~~~~~~-~--~~~~~GilGLg~~~~sl~- 253 (454)
|.|.+.|++| .+.|.+++|+|+|++ ..++++.|||++...+ . ....+||||||+..+++.
T Consensus 70 --------------~~~~i~Yg~G-s~~G~~~~D~v~ig~-~~~~~~~fg~~~~~~~~~f~~~~~~GilGLg~~~~s~~~ 133 (329)
T 1dpj_A 70 --------------TEFAIQYGTG-SLEGYISQDTLSIGD-LTIPKQDFAEATSEPGLTFAFGKFDGILGLGYDTISVDK 133 (329)
T ss_dssp --------------EEEEEEETTE-EEEEEEEEEEEEETT-EEEEEEEEEEEEECCHHHHTTCSCSEEEECSCGGGCGGG
T ss_pred --------------cEEEEEECCc-eEEEEEEEEEEEECC-eEECCeEEEEEEecCccccccCCcceEEEeCCchhhccC
Confidence 6999999999 589999999999998 6899999999998765 2 236899999999987643
Q ss_pred -----eehhhh---cCCcEEEecCCCC---CCCceEEeccCCC----CCeeeEecccCCCCCccEEEEEeEEEECcEEee
Q 012892 254 -----SQTATK---YKKLFSYCLPSSA---SSTGHLTFGPGAS----KSVQFTPLSSISGGSSFYGLEMIGISVGGQKLS 318 (454)
Q Consensus 254 -----~q~~~~---~~~~FS~~L~~~~---~~~G~l~fGg~d~----~~~~~~pl~~~~~~~~~y~v~l~~i~vg~~~~~ 318 (454)
.|+..+ .+++||+||.+.. ...|.|+|||+|+ +++.|+|+.. +.+|.|.|++|+|+++.+.
T Consensus 134 ~~~~~~~l~~qg~i~~~~Fs~~l~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~----~~~~~v~l~~i~v~~~~~~ 209 (329)
T 1dpj_A 134 VVPPFYNAIQQDLLDEKRFAFYLGDTSKDTENGGEATFGGIDESKFKGDITWLPVRR----KAYWEVKFEGIGLGDEYAE 209 (329)
T ss_dssp CCCHHHHHHHTTCCSSSEEEEEECCGGGTCSSSEEEEESSCCGGGEEEEEEEEECSS----BTTBEEEEEEEEETTEEEE
T ss_pred CCCHHHHHHhcCCcCCCEEEEEecCCCCCCCCCcEEEEcCCChhhcCCceEEEEcCC----CceEEEEeeeEEECCeEec
Confidence 223332 1689999998753 2479999999985 6899999986 6799999999999998875
Q ss_pred eccccccCCCEEEcccccCccCCHhHHHHHHHHHHHhhhcCCCCCCCccccccccccCCcccccCeEEEEEcCCcEEEEc
Q 012892 319 IAASVFTTAGTIIDSGTVITRLPPDAYTPLRTAFRQFMSKYPTAPALSLLDTCYDFSKYSTVTLPQISLFFSGGVEVSVD 398 (454)
Q Consensus 319 ~~~~~~~~~~~iiDSGT~~~~lp~~~~~~l~~~l~~~~~~~~~~~~~~~~~~Cy~~~~~~~~~~P~i~~~f~gg~~~~l~ 398 (454)
... ..+||||||++++||++++++|.+++++. .. .+.||.++|.....+|+|+|+| +|++++|+
T Consensus 210 ~~~-----~~aiiDSGTt~~~lP~~~~~~l~~~~~~~----~~------~~g~~~~~C~~~~~~P~i~f~f-~g~~~~i~ 273 (329)
T 1dpj_A 210 LES-----HGAAIDTGTSLITLPSGLAEMINAEIGAK----KG------WTGQYTLDCNTRDNLPDLIFNF-NGYNFTIG 273 (329)
T ss_dssp CSS-----CEEEECTTCSCEEECHHHHHHHHHHHTCE----EC------TTSSEEECGGGGGGCCCEEEEE-TTEEEEEC
T ss_pred CCC-----ccEEeeCCCCcEECCHHHHHHHHHHhCCc----cC------CCCeEEEECCCCCcCCcEEEEE-CCEEEEEC
Confidence 322 45999999999999999999999998654 11 1225666676667899999999 68999999
Q ss_pred CCCcEEEeCCCeEEE-EEEeCC---CCCCceeechhhhceeEEEEECCCCEEEEEeCC
Q 012892 399 KTGIMYASNISQVCL-AFAGNS---DPTDVSIFGNTQQHTLEVVYDVAGGKVGFAAGG 452 (454)
Q Consensus 399 ~~~~~~~~~~~~~C~-~~~~~~---~~~~~~IlG~~fl~~~~vvfD~~~~rigfa~~~ 452 (454)
+++|+++.+ ..|+ +|.+.+ ...+.||||+.|||++|+|||++++|||||+++
T Consensus 274 ~~~y~~~~~--~~C~~~~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 329 (329)
T 1dpj_A 274 PYDYTLEVS--GSCISAITPMDFPEPVGPLAIVGDAFLRKYYSIYDLGNNAVGLAKAI 329 (329)
T ss_dssp TTTSEEEET--TEEEECEEECCCCTTTCSEEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred HHHhEecCC--CEEEEEEEecccCCCCCCcEEEChHHhcceEEEEECCCCEEEEEECC
Confidence 999999874 6899 677652 234689999999999999999999999999974
No 7
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A
Probab=100.00 E-value=5.3e-57 Score=445.61 Aligned_cols=301 Identities=20% Similarity=0.368 Sum_probs=249.1
Q ss_pred eeccccCCccCcccEEEEEEeCCCCceEEEEEECCCceeeEeCCCc-cccccCCCCCCCCCCCCCccceecCCCcccccc
Q 012892 99 TLPAKDGSVVGAGNYIVTVGIGTPKKDLSLIFDTGSDLTWTQCEPC-VKYCYEQKEPKFDPTVSQSYSNVSCSSTICTSL 177 (454)
Q Consensus 99 ~~p~~~~~~~~~~~Y~~~i~iGtP~q~~~li~DTGS~~~Wv~~~~C-~~~C~~~~~~~f~ps~SsT~~~~~C~~~~C~~~ 177 (454)
.+|+. +..+.+|+++|+||||||++.|++||||+++||+|.+| ...|..+ +.|||++|+||+...
T Consensus 5 ~~~l~---n~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~C~~~--~~y~~~~SsT~~~~~--------- 70 (323)
T 3cms_A 5 SVPLT---NYLDSQYFGKIYLGTPPQEFTVLFDTGSSDFWVPSIYCKSNACKNH--QRFDPRKSSTFQNLG--------- 70 (323)
T ss_dssp EEEEE---EETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSHHHHTS--CCBCGGGCTTCEEEE---------
T ss_pred eeeeE---eccCCEEEEEEEECCCCeEEEEEEeCCccceEEcCCCCCcccccCC--CCCCCccCCCeEECC---------
Confidence 46766 35578999999999999999999999999999999999 3469765 899999999999875
Q ss_pred ccCCCCCCCCCCCCceeeeEeCCCCeEEEeEEEEEEEeCCCccccceeeeeeecCCC-CC--CCcceeeecCCCCCcc--
Q 012892 178 QSATGNSPACASSTCLYGIQYGDSSFSIGFFGKETLTLTPRDVFPNFLFGCGQNNRG-LF--GGAAGLMGLGRDPISL-- 252 (454)
Q Consensus 178 ~~~~~~~~~c~~~~c~~~~~Ygdgs~~~G~~~~Dtv~~~~~~~~~~~~FG~~~~~~~-~~--~~~~GilGLg~~~~sl-- 252 (454)
|.|.+.|++|+ +.|.+++|+|+|++ ..++++.|||++...+ .+ ...+||||||++.++.
T Consensus 71 --------------~~~~i~Yg~Gs-~~G~~~~D~v~ig~-~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~ 134 (323)
T 3cms_A 71 --------------KPLSIHYGTGS-MQGILGYDTVTVSN-IVDIQQTVGLSTQEPGDFFTYAEFDGILGMAYPSLASEY 134 (323)
T ss_dssp --------------EEEEEEETTEE-EEEEEEEEEEEETT-EEEEEEEEEEEEECCSHHHHHSSCSEEEECSCGGGSCTT
T ss_pred --------------cEEEEEeCCCC-eEEEEEEEEEEECC-eEEeccEEEEEEecccccccccCCceEEecCcchhhccC
Confidence 69999999997 89999999999998 6899999999998765 22 3689999999987763
Q ss_pred ----ceehhhh---cCCcEEEecCCCCCCCceEEeccCCC----CCeeeEecccCCCCCccEEEEEeEEEECcEEeeecc
Q 012892 253 ----VSQTATK---YKKLFSYCLPSSASSTGHLTFGPGAS----KSVQFTPLSSISGGSSFYGLEMIGISVGGQKLSIAA 321 (454)
Q Consensus 253 ----~~q~~~~---~~~~FS~~L~~~~~~~G~l~fGg~d~----~~~~~~pl~~~~~~~~~y~v~l~~i~vg~~~~~~~~ 321 (454)
+.++..+ .+++||+||.+... .|.|+|||+|+ +++.|+|+.. ..+|.|.|++|+|+++.+.++.
T Consensus 135 ~~~~~~~l~~q~~i~~~~FS~~l~~~~~-~G~l~fGg~d~~~~~g~l~~~p~~~----~~~~~v~l~~i~v~~~~~~~~~ 209 (323)
T 3cms_A 135 SIPVFDNMMNRHLVAQDLFSVYMDRNGQ-ESMLTLGAIDPSYYTGSLHWVPVTV----QQYWQFTVDSVTISGVVVACEG 209 (323)
T ss_dssp CCCHHHHHHHTTCSSSSEEEEECCTTSS-CEEEEESCCCGGGEEEEEEEEECSS----BTTBEEEEEEEEETTEEEESTT
T ss_pred CCCHHHHHHHCCCCCCCEEEEEECCCCC-CEEEEECCCChhhccCceEEEECcc----CCeEEEEEeeEEECCEEeecCC
Confidence 2333332 16999999998644 39999999985 5899999986 6799999999999999876443
Q ss_pred ccccCCCEEEcccccCccCCHhHHHHHHHHHHHhhhcCCCCCCCccccccccccCCcccccCeEEEEEcCCcEEEEcCCC
Q 012892 322 SVFTTAGTIIDSGTVITRLPPDAYTPLRTAFRQFMSKYPTAPALSLLDTCYDFSKYSTVTLPQISLFFSGGVEVSVDKTG 401 (454)
Q Consensus 322 ~~~~~~~~iiDSGT~~~~lp~~~~~~l~~~l~~~~~~~~~~~~~~~~~~Cy~~~~~~~~~~P~i~~~f~gg~~~~l~~~~ 401 (454)
. ..+||||||++++||++++++|.+++++.. ...+ .|.++|.....+|+|+|+| +|++++|++++
T Consensus 210 ~----~~aiiDSGTt~~~lP~~~~~~l~~~~~~~~----~~~g------~~~~~C~~~~~~P~i~f~f-~g~~~~i~~~~ 274 (323)
T 3cms_A 210 G----CQAILDTGTSKLVGPSSDILNIQQAIGATQ----NQYG------EFDIDCDNLSYMPTVVFEI-NGKMYPLTPSA 274 (323)
T ss_dssp C----EEEEECTTCCSEEECHHHHHHHHHHHTCEE----ETTT------EEEECTTCTTTSCCEEEEE-TTEEEEECHHH
T ss_pred C----cEEEEecCCccEeCCHHHHHHHHHHhCCee----cCCC------cEEEECCCCccCceEEEEE-CCEEEEECHHH
Confidence 2 459999999999999999999999987541 1111 1333444445789999999 78999999999
Q ss_pred cEEEeCCCeEEE-EEEeCCCCCCceeechhhhceeEEEEECCCCEEEEEeCC
Q 012892 402 IMYASNISQVCL-AFAGNSDPTDVSIFGNTQQHTLEVVYDVAGGKVGFAAGG 452 (454)
Q Consensus 402 ~~~~~~~~~~C~-~~~~~~~~~~~~IlG~~fl~~~~vvfD~~~~rigfa~~~ 452 (454)
|+++ .+..|+ +|.+.+ ..+.||||+.|||++|+|||++++|||||+++
T Consensus 275 y~~~--~~~~C~~~i~~~~-~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 323 (323)
T 3cms_A 275 YTSQ--DQGFCTSGFQSEN-HSQKWILGDVFIREYYSVFDRANNLVGLAKAI 323 (323)
T ss_dssp HEEE--ETTEEEESEEEC----CCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred hccC--CCCEEEEEEEeCC-CCCcEEECHHHhhceEEEEECCCCEEEEEECC
Confidence 9998 367899 587653 34689999999999999999999999999874
No 8
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2
Probab=100.00 E-value=1.8e-56 Score=443.75 Aligned_cols=298 Identities=23% Similarity=0.362 Sum_probs=248.6
Q ss_pred ceeccccCCccCcccEEEEEEeCCCCceEEEEEECCCceeeEeCC--Cccc--------cccCCCCCCCCCCCCCcccee
Q 012892 98 ATLPAKDGSVVGAGNYIVTVGIGTPKKDLSLIFDTGSDLTWTQCE--PCVK--------YCYEQKEPKFDPTVSQSYSNV 167 (454)
Q Consensus 98 ~~~p~~~~~~~~~~~Y~~~i~iGtP~q~~~li~DTGS~~~Wv~~~--~C~~--------~C~~~~~~~f~ps~SsT~~~~ 167 (454)
+.+|+.+. +.+|+++|.||||||++.|++||||+++||+|. +|.. .|..+ +.|||++|+||+..
T Consensus 3 ~~~~l~~~----~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C~~~--~~y~~~~SsT~~~~ 76 (334)
T 1j71_A 3 VPTTLINE----GPSYAADIVVGSNQQKQTVVIDTGSSDLWVVDTDAECQVTYSGQTNNFCKQE--GTFDPSSSSSAQNL 76 (334)
T ss_dssp EEEEEEEC----SSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSTTCCTTGGGSS--CCBCGGGCTTCEEE
T ss_pred eeEEEecC----CcEEEEEEEEcCCCcEEEEEEcCCCCCEEEecCCCCCcCcccccccccccCC--CcCCcccCCCcccC
Confidence 46777653 678999999999999999999999999999876 6742 47654 89999999999987
Q ss_pred cCCCccccccccCCCCCCCCCCCCceeeeEeCCCCeEEEeEEEEEEEeCCCccccceeeeeeecCCCCCCCcceeeecCC
Q 012892 168 SCSSTICTSLQSATGNSPACASSTCLYGIQYGDSSFSIGFFGKETLTLTPRDVFPNFLFGCGQNNRGLFGGAAGLMGLGR 247 (454)
Q Consensus 168 ~C~~~~C~~~~~~~~~~~~c~~~~c~~~~~Ygdgs~~~G~~~~Dtv~~~~~~~~~~~~FG~~~~~~~~~~~~~GilGLg~ 247 (454)
. |.|.+.|++|+.+.|.+++|+|+|++ ..++++.|||++... ..+||||||+
T Consensus 77 ~-----------------------~~~~i~Yg~Gs~~~G~~~~D~v~~g~-~~~~~~~fg~~~~~~----~~~GilGLg~ 128 (334)
T 1j71_A 77 N-----------------------QDFSIEYGDLTSSQGSFYKDTVGFGG-ISIKNQQFADVTTTS----VDQGIMGIGF 128 (334)
T ss_dssp E-----------------------EEEEEEBTTSCEEEEEEEEEEEEETT-EEEEEEEEEEEEEES----SSSCEEECSC
T ss_pred C-----------------------CceEEEECCCCEEEEEEEEEEEEECC-EEEccEEEEEEEecC----CCccEEEEcC
Confidence 5 69999999998889999999999998 689999999999864 4899999999
Q ss_pred CCC--------ccceehhhhc---CCcEEEecCCCCCCCceEEeccCCC----CCeeeEecccCCCCCccEEEEEeEEEE
Q 012892 248 DPI--------SLVSQTATKY---KKLFSYCLPSSASSTGHLTFGPGAS----KSVQFTPLSSISGGSSFYGLEMIGISV 312 (454)
Q Consensus 248 ~~~--------sl~~q~~~~~---~~~FS~~L~~~~~~~G~l~fGg~d~----~~~~~~pl~~~~~~~~~y~v~l~~i~v 312 (454)
+.+ +++.|+..+. +++||+||.+.....|.|+|||+|+ +++.|+|+.. ..+|.|.|++|+|
T Consensus 129 ~~~~~~~~~~~~~~~~L~~qg~i~~~~Fs~~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~----~~~~~v~l~~i~v 204 (334)
T 1j71_A 129 TADEAGYNLYDNVPVTLKKQGIINKNAYSLYLNSEDASTGKIIFGGVDNAKYTGTLTALPVTS----SVELRVHLGSINF 204 (334)
T ss_dssp GGGSSTTCCCCCHHHHHHHTTSCSSSEEEEECCCTTCSEEEEEETEEETTSEEEEEEEEECCC----SSSCEEEEEEEEE
T ss_pred CcccCccccCCcHHHHHHHCCCCCccEEEEEeCCCCCCCeEEEEeeechHHccCceEEEEccC----CCeEEEEEeEEEE
Confidence 865 4555665442 6899999997655689999999875 5799999987 5689999999999
Q ss_pred CcEEeeeccccccCCCEEEcccccCccCCHhHHHHHHHHHHHhhhcCCCCCCCccccccccccCCcccccCeEEEEEcCC
Q 012892 313 GGQKLSIAASVFTTAGTIIDSGTVITRLPPDAYTPLRTAFRQFMSKYPTAPALSLLDTCYDFSKYSTVTLPQISLFFSGG 392 (454)
Q Consensus 313 g~~~~~~~~~~~~~~~~iiDSGT~~~~lp~~~~~~l~~~l~~~~~~~~~~~~~~~~~~Cy~~~~~~~~~~P~i~~~f~gg 392 (454)
+++.+..+ ..+||||||++++||++++++|.+++++.+. .....+.+.+|+ .+|.|+|+|.||
T Consensus 205 ~g~~~~~~------~~~iiDSGTt~~~lP~~~~~~l~~~~~~~~~---~~~~~~~~~~C~--------~~p~i~f~f~~g 267 (334)
T 1j71_A 205 DGTSVSTN------ADVVLDSGTTITYFSQSTADKFARIVGATWD---SRNEIYRLPSCD--------LSGDAVFNFDQG 267 (334)
T ss_dssp TTEEEEEE------EEEEECTTCSSEEECHHHHHHHHHHHTCEEE---TTTTEEECSSSC--------CCSEEEEEESTT
T ss_pred CCEeccCC------ccEEEeCCCCcEecCHHHHHHHHHHcCCccc---CCCceEEEEcCC--------CCCceEEEEcCC
Confidence 99988643 3499999999999999999999999987642 111111114463 279999999778
Q ss_pred cEEEEcCCCcEEEeCCCeEEEE-EEeCCCCCCceeechhhhceeEEEEECCCCEEEEEeCCCC
Q 012892 393 VEVSVDKTGIMYASNISQVCLA-FAGNSDPTDVSIFGNTQQHTLEVVYDVAGGKVGFAAGGCS 454 (454)
Q Consensus 393 ~~~~l~~~~~~~~~~~~~~C~~-~~~~~~~~~~~IlG~~fl~~~~vvfD~~~~rigfa~~~C~ 454 (454)
++++||+++|+++...+..|+. +.+. +.||||+.|||++|+|||++++|||||+++|+
T Consensus 268 ~~~~i~~~~y~~~~~~~~~C~~~i~~~----~~~iLG~~fl~~~y~vfD~~~~~igfA~~~~~ 326 (334)
T 1j71_A 268 VKITVPLSELILKDSDSSICYFGISRN----DANILGDNFLRRAYIVYDLDDKTISLAQVKYT 326 (334)
T ss_dssp CEEEEEGGGGEEECSSSSCEEESEEEC----TTCEECHHHHTTEEEEEETTTTEEEEEEECCC
T ss_pred cEEEECHHHheeecCCCCeeEEEEeEC----CCcEEChHhhccEEEEEECCCCEEEEEecCCC
Confidence 9999999999998654556994 5543 35999999999999999999999999999995
No 9
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2
Probab=100.00 E-value=3.5e-56 Score=440.00 Aligned_cols=301 Identities=24% Similarity=0.441 Sum_probs=250.9
Q ss_pred eeccccCCccCcccEEEEEEeCCCCceEEEEEECCCceeeEeCCCcc-ccccCCCCCCCCCCCCCccceecCCCcccccc
Q 012892 99 TLPAKDGSVVGAGNYIVTVGIGTPKKDLSLIFDTGSDLTWTQCEPCV-KYCYEQKEPKFDPTVSQSYSNVSCSSTICTSL 177 (454)
Q Consensus 99 ~~p~~~~~~~~~~~Y~~~i~iGtP~q~~~li~DTGS~~~Wv~~~~C~-~~C~~~~~~~f~ps~SsT~~~~~C~~~~C~~~ 177 (454)
.+|+.+ ..+.+|+++|.||||||++.|++||||+++||+|.+|. ..|..+ +.|||++|+|++...
T Consensus 3 ~~~l~n---~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~C~~~--~~y~~~~SsT~~~~~--------- 68 (324)
T 1am5_A 3 TEQMKN---EADTEYYGVISIGTPPESFKVIFDTGSSNLWVSSSHCSAQACSNH--NKFKPRQSSTYVETG--------- 68 (324)
T ss_dssp EEEEEE---ETTTEEEEEEEETTTTEEEEEEEETTCCCEEECBTTCCSHHHHTS--CCBCGGGCTTCEEEE---------
T ss_pred eeeeec---CCCCEEEEEEEECCCCeEEEEEEeCCCcceEEecCCCCcccccCC--CcCCCccCCCeEeCC---------
Confidence 467663 46789999999999999999999999999999999994 358765 899999999999875
Q ss_pred ccCCCCCCCCCCCCceeeeEeCCCCeEEEeEEEEEEEeCCCccccceeeeeeecCCC-CC--CCcceeeecCCCCCccc-
Q 012892 178 QSATGNSPACASSTCLYGIQYGDSSFSIGFFGKETLTLTPRDVFPNFLFGCGQNNRG-LF--GGAAGLMGLGRDPISLV- 253 (454)
Q Consensus 178 ~~~~~~~~~c~~~~c~~~~~Ygdgs~~~G~~~~Dtv~~~~~~~~~~~~FG~~~~~~~-~~--~~~~GilGLg~~~~sl~- 253 (454)
|.|.+.|++|+ +.|.+++|+|+|++ ..++++.|||++...+ .+ ...+||||||++.++..
T Consensus 69 --------------~~~~i~Yg~Gs-~~G~~~~D~v~~g~-~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~ 132 (324)
T 1am5_A 69 --------------KTVDLTYGTGG-MRGILGQDTVSVGG-GSDPNQELGESQTEPGPFQAAAPFDGILGLAYPSIAAAG 132 (324)
T ss_dssp --------------EEEEEECSSCE-EEEEEEEEEEESSS-SCEEEEEEEEEEECCSTTTTTCSSSEEEECSCGGGCGGG
T ss_pred --------------cEEEEEECCCC-eEEEEEECceeECC-cEEcccEEEEEEecccccccCCCCceEEecCCccccccC
Confidence 69999999997 59999999999998 6899999999998765 23 36899999999877643
Q ss_pred -----eehhhh---cCCcEEEecCCCCCCCceEEeccCCC----CCeeeEecccCCCCCccEEEEEeEEEECcEEeeecc
Q 012892 254 -----SQTATK---YKKLFSYCLPSSASSTGHLTFGPGAS----KSVQFTPLSSISGGSSFYGLEMIGISVGGQKLSIAA 321 (454)
Q Consensus 254 -----~q~~~~---~~~~FS~~L~~~~~~~G~l~fGg~d~----~~~~~~pl~~~~~~~~~y~v~l~~i~vg~~~~~~~~ 321 (454)
.|+..+ .+++||+||.+.....|.|+|||+|+ +++.|+|+.. ..+|.|.+++|+|+++.+....
T Consensus 133 ~~~~~~~l~~qg~i~~~~FS~~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~----~~~~~v~l~~i~v~~~~~~~~~ 208 (324)
T 1am5_A 133 AVPVFDNMGSQSLVEKDLFSFYLSGGGANGSEVMLGGVDNSHYTGSIHWIPVTA----EKYWQVALDGITVNGQTAACEG 208 (324)
T ss_dssp CCCHHHHHHHTTCSSSSEEEEECCSTTCSCEEEEESSCCGGGBCSCCEEEEEEE----ETTEEEEECEEEETTEECCCCC
T ss_pred CCchHHhHHhcCCCCCCEEEEEecCCCCCCcEEEECccCHHHcCCceEEEecCC----CcEEEEEEeEEEECCceeeccC
Confidence 333333 16899999998755689999999884 6899999987 6799999999999998764221
Q ss_pred ccccCCCEEEcccccCccCCHhHHHHHHHHHHHhhhcCCCCCCCccccccccccCCcccccCeEEEEEcCCcEEEEcCCC
Q 012892 322 SVFTTAGTIIDSGTVITRLPPDAYTPLRTAFRQFMSKYPTAPALSLLDTCYDFSKYSTVTLPQISLFFSGGVEVSVDKTG 401 (454)
Q Consensus 322 ~~~~~~~~iiDSGT~~~~lp~~~~~~l~~~l~~~~~~~~~~~~~~~~~~Cy~~~~~~~~~~P~i~~~f~gg~~~~l~~~~ 401 (454)
..+||||||++++||++++++|.+++++. . ..+. |.++|.....+|+|+|+| +|++++|++++
T Consensus 209 -----~~aiiDSGTt~~~lp~~~~~~l~~~~~~~-~----~~g~------~~~~C~~~~~~P~i~f~f-~g~~~~i~~~~ 271 (324)
T 1am5_A 209 -----CQAIVDTGTSKIVAPVSALANIMKDIGAS-E----NQGE------MMGNCASVQSLPDITFTI-NGVKQPLPPSA 271 (324)
T ss_dssp -----EEEEECTTCSSEEECTTTHHHHHHHHTCE-E----CCCC------EECCTTSSSSSCCEEEEE-TTEEEEECHHH
T ss_pred -----ceEEEecCCccEECCHHHHHHHHHHhCCc-c----cCCc------EEEeCCCcccCCcEEEEE-CCEEEEECHHH
Confidence 35999999999999999999999998764 1 1111 333344445789999999 78999999999
Q ss_pred cEEEeCCCeEEE-EEEeCC---CCCCceeechhhhceeEEEEECCCCEEEEEeCC
Q 012892 402 IMYASNISQVCL-AFAGNS---DPTDVSIFGNTQQHTLEVVYDVAGGKVGFAAGG 452 (454)
Q Consensus 402 ~~~~~~~~~~C~-~~~~~~---~~~~~~IlG~~fl~~~~vvfD~~~~rigfa~~~ 452 (454)
|+++. +..|+ +|.+.+ ...+.||||+.|||++|+|||++++|||||+++
T Consensus 272 y~~~~--~~~C~~~~~~~~~~~~~~~~~ilG~~fl~~~y~vfD~~~~~igfa~a~ 324 (324)
T 1am5_A 272 YIEGD--QAFCTSGLGSSGVPSNTSELWIFGDVFLRNYYTIYDRTNNKVGFAPAA 324 (324)
T ss_dssp HEEES--SSCEEECEEECCSCCSSSCEEEECHHHHHHEEEEEETTTTEEEEEEBC
T ss_pred hcccC--CCeEEEEEEECccCCCCCCcEEEChHHhccEEEEEECCCCEEEEEECC
Confidence 99987 67899 787653 134689999999999999999999999999974
No 10
>1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A
Probab=100.00 E-value=4.6e-56 Score=448.51 Aligned_cols=326 Identities=22% Similarity=0.447 Sum_probs=259.1
Q ss_pred ceeccccCCccCcccEEEEEEeCCCCceEEEEEECCCceeeEeCCCccccccCCCCCCCCCCCCCccceecCCCcccccc
Q 012892 98 ATLPAKDGSVVGAGNYIVTVGIGTPKKDLSLIFDTGSDLTWTQCEPCVKYCYEQKEPKFDPTVSQSYSNVSCSSTICTSL 177 (454)
Q Consensus 98 ~~~p~~~~~~~~~~~Y~~~i~iGtP~q~~~li~DTGS~~~Wv~~~~C~~~C~~~~~~~f~ps~SsT~~~~~C~~~~C~~~ 177 (454)
+.+|+.. +..+.+|+++|+|||| |+|||||+++||+|++|. +|+.++|.++.|...
T Consensus 3 ~~~pv~~--~~~~~~Y~~~i~iGtP-----v~~DTGSs~lWv~c~~~~-----------------~~~~~~C~s~~C~~~ 58 (381)
T 1t6e_X 3 VLAPVTK--DPATSLYTIPFHDGAS-----LVLDVAGPLVWSTCDGGQ-----------------PPAEIPCSSPTCLLA 58 (381)
T ss_dssp EEEEEEE--CTTTCCEEEEEETTEE-----EEEETTCCCEEECCCTTC-----------------CCCCCBTTSHHHHHH
T ss_pred eEEeEEe--cCCCcEEEEEEeCCCE-----EEEECCCCceEEeCCCCC-----------------CCCccCCCCchhccc
Confidence 4567763 4567899999999998 999999999999998641 255677888888764
Q ss_pred ccCCCCCCCCC---------CCCc-eeeeEeCCCCeEEEeEEEEEEEeCC---Cccccce----eeeeeecC--CCCCCC
Q 012892 178 QSATGNSPACA---------SSTC-LYGIQYGDSSFSIGFFGKETLTLTP---RDVFPNF----LFGCGQNN--RGLFGG 238 (454)
Q Consensus 178 ~~~~~~~~~c~---------~~~c-~~~~~Ygdgs~~~G~~~~Dtv~~~~---~~~~~~~----~FG~~~~~--~~~~~~ 238 (454)
..+. ...|. ++.| .|.+.|+||+.+.|.+++|+|+|++ ...++++ .|||++.+ .+.+..
T Consensus 59 ~~~~--~~sc~~~~~~~~~~~~~c~~f~i~YgdGs~~~G~l~~Dtv~ig~~~g~~~v~~~~~~~~Fg~~~~~~~~~~~~~ 136 (381)
T 1t6e_X 59 NAYP--APGCPAPSCGSDKHDKPCTAYPYNPVSGACAAGSLSHTRFVANTTDGSKPVSKVNVGVLAACAPSKLLASLPRG 136 (381)
T ss_dssp HSSC--CTTCCCCCC------CBCEECCBCTTTCCBCCEEEEEEEEEEEEESSSSEEEEEEEEEEEEECCGGGGTTSCTT
T ss_pred cCCC--CCCCCCccCCcCcCCCccccccccccCCceeeEEEEEEEEEeeccCCCccccceeeeeEeecCcccccCCCCCC
Confidence 3321 22343 2457 5999999998789999999999984 2356665 56999876 444567
Q ss_pred cceeeecCCCCCccceehhhh--cCCcEEEecCCCCCCCceEEeccCCC------CCeeeEecccCCCCCccEEEEEeEE
Q 012892 239 AAGLMGLGRDPISLVSQTATK--YKKLFSYCLPSSASSTGHLTFGPGAS------KSVQFTPLSSISGGSSFYGLEMIGI 310 (454)
Q Consensus 239 ~~GilGLg~~~~sl~~q~~~~--~~~~FS~~L~~~~~~~G~l~fGg~d~------~~~~~~pl~~~~~~~~~y~v~l~~i 310 (454)
.+||||||++++++++|+..+ .+++||+||.+. ..|+|+|||.+. +++.|+|++.++.. .+|+|+|++|
T Consensus 137 ~dGIlGLg~~~~s~~~ql~~~~~~~~~FS~~L~~~--~~G~l~fGg~~~~~~~~~g~l~~tPl~~~~~~-~~y~v~l~~i 213 (381)
T 1t6e_X 137 STGVAGLANSGLALPAQVASAQKVANRFLLCLPTG--GPGVAIFGGGPVPWPQFTQSMPYTPLVTKGGS-PAHYISARSI 213 (381)
T ss_dssp EEEEEECSSSTTSHHHHHHHHHTCCSEEEEECCSS--SCEEEEESCCSCSCHHHHTTCCEEECBCCTTC-CSCEECEEEE
T ss_pred CceEEEeCCCcchhHHHHhhhcccCceEEEEeCCC--CCeeEEeCCcccccccccCcceeeccccCCCC-cceEEEEEEE
Confidence 899999999999999998764 368999999875 589999999763 68999999986443 3577999999
Q ss_pred EECcEEeeeccccccCCCEEEcccccCccCCHhHHHHHHHHHHHhhh-------cCCCC-CCCccccccccccCCc----
Q 012892 311 SVGGQKLSIAASVFTTAGTIIDSGTVITRLPPDAYTPLRTAFRQFMS-------KYPTA-PALSLLDTCYDFSKYS---- 378 (454)
Q Consensus 311 ~vg~~~~~~~~~~~~~~~~iiDSGT~~~~lp~~~~~~l~~~l~~~~~-------~~~~~-~~~~~~~~Cy~~~~~~---- 378 (454)
+|+++.+.++...|..+++||||||++++||+++|++|.+++.+++. .++.. .....++.||+.++..
T Consensus 214 ~vg~~~~~~~~~~~~~~~~iiDTGTtl~~lp~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~C~~~~~~~~~~~ 293 (381)
T 1t6e_X 214 VVGDTRVPVPEGALATGGVMLSTRLPYVLLRPDVYRPLMDAFTKALAAQHANGAPVARAVEAVAPFGVCYDTKTLGNNLG 293 (381)
T ss_dssp EETTEECCCCTTCSCTTCEEECSSCSSEEECHHHHHHHHHHHHHHHHHC-------CCEECCCTTCSCEEEGGGCCEETT
T ss_pred EEcCEEecCCHHHccCCCEEEECCCccEEeCHHHHHHHHHHHHHhhcccccccccccccCCCCCCCCccCCCCCCccccc
Confidence 99999998777666447899999999999999999999999998874 22221 2233457899876532
Q ss_pred ccccCeEEEEEcCCcEEEEcCCCcEEEeCCCeEEEEEEeCCC------CCCceeechhhhceeEEEEECCCCEEEEEeCC
Q 012892 379 TVTLPQISLFFSGGVEVSVDKTGIMYASNISQVCLAFAGNSD------PTDVSIFGNTQQHTLEVVYDVAGGKVGFAAGG 452 (454)
Q Consensus 379 ~~~~P~i~~~f~gg~~~~l~~~~~~~~~~~~~~C~~~~~~~~------~~~~~IlG~~fl~~~~vvfD~~~~rigfa~~~ 452 (454)
...+|+|+|+|+||++++|++++|+++...+..|++|...+. ..+.||||+.|||++|+|||++++|||||++.
T Consensus 294 ~~~~P~i~f~f~gg~~~~l~~~~y~~~~~~~~~Cl~~~~~~~~~~~~~~~~~~ILGd~fl~~~yvvfD~~~~riGfA~~~ 373 (381)
T 1t6e_X 294 GYAVPNVQLGLDGGSDWTMTGKNSMVDVKQGTACVAFVEMKGVAAGDGRAPAVILGGAQMEDFVLDFDMEKKRLGFSRLP 373 (381)
T ss_dssp EECCCCEEEEETTSCEEEECHHHHEEEEETTEEEESEEECCCCC------CSEEECHHHHTTEEEEEETTTTEEEEEECC
T ss_pred CCcCCeEEEEECCCcEEEeCCCeEEEEcCCCeEEEEEEcCCCcccccCCCceEEEChHHhCCcEEEEECCCCEEEEeccc
Confidence 136899999997679999999999998766789999887643 12579999999999999999999999999854
No 11
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A*
Probab=100.00 E-value=3.2e-56 Score=446.69 Aligned_cols=313 Identities=21% Similarity=0.334 Sum_probs=256.2
Q ss_pred CcceeccccCCccCcccEEEEEEeCCCCceEEEEEECCCceeeEeCCCcc--ccccCCCCCCCCCCCCCccceecCCCcc
Q 012892 96 DDATLPAKDGSVVGAGNYIVTVGIGTPKKDLSLIFDTGSDLTWTQCEPCV--KYCYEQKEPKFDPTVSQSYSNVSCSSTI 173 (454)
Q Consensus 96 ~~~~~p~~~~~~~~~~~Y~~~i~iGtP~q~~~li~DTGS~~~Wv~~~~C~--~~C~~~~~~~f~ps~SsT~~~~~C~~~~ 173 (454)
+...+|+.+ ..+.+|+++|.||||||++.|++||||+++||+|.+|. ..|..+ +.|||++|+||+...
T Consensus 6 ~~~~~~l~~---~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~~C~~~--~~y~~~~SsT~~~~~----- 75 (361)
T 1mpp_A 6 SVDTPGLYD---FDLEEYAIPVSIGTPGQDFYLLFDTGSSDTWVPHKGCDNSEGCVGK--RFFDPSSSSTFKETD----- 75 (361)
T ss_dssp CEEEEEEEE---TTTTEEEEEEEETTTTEEEEEEEETTCCCCEEEBTTCCGGGTCCSS--CCBCGGGCTTCEEEE-----
T ss_pred ccceEEeec---CCCCEEEEEEEECCCCcEEEEEEcCCCCCeEECCCCCCCCccCCCC--CcCCCccCCceEecC-----
Confidence 344577763 45789999999999999999999999999999999996 359765 899999999999875
Q ss_pred ccccccCCCCCCCCCCCCceeeeEeCCCCeEEEeEEEEEEEeCCCccccceeeeeeecCCC------CC--CCcceeeec
Q 012892 174 CTSLQSATGNSPACASSTCLYGIQYGDSSFSIGFFGKETLTLTPRDVFPNFLFGCGQNNRG------LF--GGAAGLMGL 245 (454)
Q Consensus 174 C~~~~~~~~~~~~c~~~~c~~~~~Ygdgs~~~G~~~~Dtv~~~~~~~~~~~~FG~~~~~~~------~~--~~~~GilGL 245 (454)
|.|.+.|++|+ +.|.+++|+|+|++ ..++++.|||++...+ .+ ...+|||||
T Consensus 76 ------------------~~~~i~Yg~Gs-~~G~~~~D~v~~g~-~~v~~~~fg~~~~~~~~~~~~~~~~~~~~~GilGL 135 (361)
T 1mpp_A 76 ------------------YNLNITYGTGG-ANGIYFRDSITVGG-ATVKQQTLAYVDNVSGPTAEQSPDSELFLDGIFGA 135 (361)
T ss_dssp ------------------EEEEEECSSCE-EEEEEEEEEEEETT-EEEEEEEEEEEEEEESGGGSSCTTCSSCCCEEEEC
T ss_pred ------------------CeEEEEECCce-EEEEEEEEEEEECC-EEEeceEEEEEEeccCccccccccccCCCCCEEEe
Confidence 69999999997 89999999999998 7999999999998754 23 368999999
Q ss_pred CCCCCccc------------eehhhh---cCCcEEEecCCCCCCCceEEeccCCC----CCeeeEecccCCCCCccEEEE
Q 012892 246 GRDPISLV------------SQTATK---YKKLFSYCLPSSASSTGHLTFGPGAS----KSVQFTPLSSISGGSSFYGLE 306 (454)
Q Consensus 246 g~~~~sl~------------~q~~~~---~~~~FS~~L~~~~~~~G~l~fGg~d~----~~~~~~pl~~~~~~~~~y~v~ 306 (454)
|++.+++. .|+..+ .+++||+||.+. ...|.|+|||+|+ +++.|+|+........+|.|.
T Consensus 136 g~~~~s~~~~~~~~~~~~~~~~l~~~g~i~~~~FS~~l~~~-~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~~~~v~ 214 (361)
T 1mpp_A 136 AYPDNTAMEAEYGDTYNTVHVNLYKQGLISSPVFSVYMNTN-DGGGQVVFGGVNNTLLGGDIQYTDVLKSRGGYFFWDAP 214 (361)
T ss_dssp SCGGGSHHHHHHSCCCCCHHHHHHHTTSSSSSEEEEECCCS-SSEEEEEESSCCGGGBSSCCEEEECEEETTEEEEEEEE
T ss_pred CCcccccccccccccCCCHHHHHHHcCCCCCcEEEEEecCC-CCCcEEEEecCChhhcCCceEEEEcccCCCceeEEEEE
Confidence 99876643 234333 169999999986 4579999999984 689999999843222389999
Q ss_pred EeEEEECcEEeeeccccccCCCEE-EcccccCccCCHhHHHHHHHHHHHhhhcCCCCCCCccccccccccCCccccc-Ce
Q 012892 307 MIGISVGGQKLSIAASVFTTAGTI-IDSGTVITRLPPDAYTPLRTAFRQFMSKYPTAPALSLLDTCYDFSKYSTVTL-PQ 384 (454)
Q Consensus 307 l~~i~vg~~~~~~~~~~~~~~~~i-iDSGT~~~~lp~~~~~~l~~~l~~~~~~~~~~~~~~~~~~Cy~~~~~~~~~~-P~ 384 (454)
|++|+|+++.+..+.. ..+| |||||++++||++++++|.+++.+.. +...+ .+..+|+. ...+ |+
T Consensus 215 l~~i~v~~~~~~~~~~----~~ai~iDSGTt~~~lP~~~~~~l~~~~~~~~---~~~~g-~~~~~C~~-----~~~~~p~ 281 (361)
T 1mpp_A 215 VTGVKIDGSDAVSFDG----AQAFTIDTGTNFFIAPSSFAEKVVKAALPDA---TESQQ-GYTVPCSK-----YQDSKTT 281 (361)
T ss_dssp EEEEEETTEEEEEEEE----EEEEEEETTCCSEEEEHHHHHHHHHHHCTTC---EEETT-EEEEEHHH-----HTTCCCE
T ss_pred EeEEEECCeeeccCCC----CEEEEECCCCCceeCCHHHHHHHHHHhCCcc---cCCCC-cEEEECCC-----cccCCCc
Confidence 9999999988753322 4599 99999999999999999999997652 21111 12234653 3467 99
Q ss_pred EEEEEc-C-----CcEEEEcCCCcEEEeC-CCeEEE-EEEeCCCCCCceeechhhhceeEEEEECCCCEEEEEeCCCC
Q 012892 385 ISLFFS-G-----GVEVSVDKTGIMYASN-ISQVCL-AFAGNSDPTDVSIFGNTQQHTLEVVYDVAGGKVGFAAGGCS 454 (454)
Q Consensus 385 i~~~f~-g-----g~~~~l~~~~~~~~~~-~~~~C~-~~~~~~~~~~~~IlG~~fl~~~~vvfD~~~~rigfa~~~C~ 454 (454)
|+|+|. | |++++|++++|+++.. .+..|+ +|.+. ..+.||||+.|||++|+|||++++|||||+++|+
T Consensus 282 i~f~f~~g~~~~~g~~~~i~~~~y~~~~~~~~~~C~~~i~~~--~~~~~iLG~~fl~~~yvvfD~~~~~igfa~~~~~ 357 (361)
T 1mpp_A 282 FSLVLQKSGSSSDTIDVSVPISKMLLPVDKSGETCMFIVLPD--GGNQFIVGNLFLRFFVNVYDFGKNRIGFAPLASG 357 (361)
T ss_dssp EEEEEECTTCSSCEEEEEEEGGGGEEECSSSSCEEEESEEEE--SSSCCEEEHHHHTTEEEEEETTTTEEEEEEBCTT
T ss_pred EEEEEEcCCcCCCCeEEEECHHHhEEecCCCCCeeEEEEEeC--CCCCEEEChHHhccEEEEEECCCCEEEEEEcccC
Confidence 999994 4 7999999999999865 356899 78765 3457999999999999999999999999999995
No 12
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} SCOP: b.50.1.0 PDB: 3tne_A*
Probab=100.00 E-value=7.6e-56 Score=440.33 Aligned_cols=300 Identities=23% Similarity=0.392 Sum_probs=250.5
Q ss_pred ceeccccCCccCcccEEEEEEeCCCCceEEEEEECCCceeeEe-----CCCccccccCCCCCCCCCCCCCccceecCCCc
Q 012892 98 ATLPAKDGSVVGAGNYIVTVGIGTPKKDLSLIFDTGSDLTWTQ-----CEPCVKYCYEQKEPKFDPTVSQSYSNVSCSST 172 (454)
Q Consensus 98 ~~~p~~~~~~~~~~~Y~~~i~iGtP~q~~~li~DTGS~~~Wv~-----~~~C~~~C~~~~~~~f~ps~SsT~~~~~C~~~ 172 (454)
+.+|+.+. +..|+++|.||||||++.|++||||+++||+ |.+|. .|..+ +.|||++|+||+...
T Consensus 3 i~~~l~~~----~~~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~~~~C~~~~-~C~~~--~~y~~~~SsT~~~~~---- 71 (339)
T 3fv3_A 3 ISLSLINE----GPSYASKVSVGSNKQQQTVIIDTGSSDFWVVDSNAQCGKGV-DCKSS--GTFTPSSSSSYKNLG---- 71 (339)
T ss_dssp EEEEEEEC----SSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECTTC-CTTTT--CCBCGGGCTTCEEEE----
T ss_pred eeeEEEcC----CCEEEEEEEEcCCCcEEEEEEeCCCCceEEecCCCCCCCCC-CCCCC--CcCCCccCcceeeCC----
Confidence 56787754 5789999999999999999999999999998 55543 48754 899999999999975
Q ss_pred cccccccCCCCCCCCCCCCceeeeEeCCCCeEEEeEEEEEEEeCCCccccceeeeeeecCCCCCCCcceeeecCCCCCc-
Q 012892 173 ICTSLQSATGNSPACASSTCLYGIQYGDSSFSIGFFGKETLTLTPRDVFPNFLFGCGQNNRGLFGGAAGLMGLGRDPIS- 251 (454)
Q Consensus 173 ~C~~~~~~~~~~~~c~~~~c~~~~~Ygdgs~~~G~~~~Dtv~~~~~~~~~~~~FG~~~~~~~~~~~~~GilGLg~~~~s- 251 (454)
|.|.+.|++|+.+.|.+++|+|+|++ ..++++.|||++...+ .+||||||++.++
T Consensus 72 -------------------~~~~i~Yg~gs~~~G~~~~D~v~~g~-~~v~~~~fg~~~~~~~----~~GilGLg~~~~~~ 127 (339)
T 3fv3_A 72 -------------------AAFTIRYGDGSTSQGTWGKDTVTING-VSITGQQIADVTQTSV----DQGILGIGYTSNEA 127 (339)
T ss_dssp -------------------EEEEEECTTSCEEEEEEEEEEEEETT-EEEEEEEEEEEEEESS----SSCEEECSCGGGCC
T ss_pred -------------------ceEEEEECCCceEEEEEEEEEEEECC-EEECceEEEEEEecCC----CceeEEecCccccc
Confidence 69999999998899999999999998 6999999999998765 6999999998764
Q ss_pred ---------------cceehhhhc---CCcEEEecCCCCCCCceEEeccCCC----CCeeeEecccCCCCCccEEEEEeE
Q 012892 252 ---------------LVSQTATKY---KKLFSYCLPSSASSTGHLTFGPGAS----KSVQFTPLSSISGGSSFYGLEMIG 309 (454)
Q Consensus 252 ---------------l~~q~~~~~---~~~FS~~L~~~~~~~G~l~fGg~d~----~~~~~~pl~~~~~~~~~y~v~l~~ 309 (454)
++.|+..+. ++.||+||.+.....|.|+|||+|+ +++.|+|+.. ..+|.|++++
T Consensus 128 ~~~~~~~~~~~~~~~~~~~L~~~g~i~~~~fsl~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~----~~~~~v~l~~ 203 (339)
T 3fv3_A 128 VYDTSGRQTTPNYDNVPVTLKKQGKIRTNAYSLYLNSPSAETGTIIFGGVDNAKYSGKLVAEQVTS----SQALTISLAS 203 (339)
T ss_dssp CBCTTSCBCSCCCCCHHHHHHHTTSCSSSEEEEECCCTTCSEEEEEETEEETTSBSSCCEEEEBCC----SSSCEEEEEE
T ss_pred cccccccccCccCCcHHHHHHHCCCCCCceEEEEECCCCCCCeEEEEeeechHHeecceEEEeccc----CccEEEEEEE
Confidence 445555542 6899999998766689999999874 6899999987 5689999999
Q ss_pred EEECcEEeeeccccccCCCEEEcccccCccCCHhHHHHHHHHHHHhhhcCCCCCCCccccccccccCCcccccCeEEEEE
Q 012892 310 ISVGGQKLSIAASVFTTAGTIIDSGTVITRLPPDAYTPLRTAFRQFMSKYPTAPALSLLDTCYDFSKYSTVTLPQISLFF 389 (454)
Q Consensus 310 i~vg~~~~~~~~~~~~~~~~iiDSGT~~~~lp~~~~~~l~~~l~~~~~~~~~~~~~~~~~~Cy~~~~~~~~~~P~i~~~f 389 (454)
|+|+++.+... ..+||||||++++||++++++|.+++++.........+ ....+|+ . ..+|+|+|+|
T Consensus 204 i~v~g~~~~~~------~~~iiDSGtt~~~lP~~~~~~i~~~~~~~~~~~~~~~~-~~~~~C~-----~-~~~p~i~f~f 270 (339)
T 3fv3_A 204 VNLKGSSFSFG------DGALLDSGTTLTYFPSDFAAQLADKAGARLVQVARDQY-LYFIDCN-----T-DTSGTTVFNF 270 (339)
T ss_dssp EEESSCEEEEE------EEEEECTTBSSEEECHHHHHHHHHHHTCEEEEEETTEE-EEEECTT-----C-CCCSEEEEEE
T ss_pred EEECCEeecCC------ccEEEeCCCCCEecCHHHHHHHHHHcCCEEccccccCc-eEEEecC-----C-CCCCcEEEEE
Confidence 99999987654 34999999999999999999999999876321101111 1222453 2 4589999999
Q ss_pred cCCcEEEEcCCCcEEEeCCCeEEE-EEEeCCCCCCceeechhhhceeEEEEECCCCEEEEEeCCCC
Q 012892 390 SGGVEVSVDKTGIMYASNISQVCL-AFAGNSDPTDVSIFGNTQQHTLEVVYDVAGGKVGFAAGGCS 454 (454)
Q Consensus 390 ~gg~~~~l~~~~~~~~~~~~~~C~-~~~~~~~~~~~~IlG~~fl~~~~vvfD~~~~rigfa~~~C~ 454 (454)
.+|++++||+++|+++.. +..|+ +|.+ .+.||||+.|||++|+|||++++|||||+++|+
T Consensus 271 ~~g~~~~v~~~~~~~~~~-~~~C~~~i~~----~~~~ilG~~fl~~~y~vfD~~~~~igfA~~~~~ 331 (339)
T 3fv3_A 271 GNGAKITVPNTEYVYQNG-DGTCLWGIQP----SDDTILGDNFLRHAYLLYNLDANTISIAQVKYT 331 (339)
T ss_dssp TTSCEEEEEGGGGEEECS-SSCEEESEEE----CSSCEECHHHHTTEEEEEETTTTEEEEEEBCCC
T ss_pred CCCCEEEECHHHheeeCC-CCeEEEEEEe----CCcEEeChHHHhCEEEEEECCCCEEEEEecCCC
Confidence 668999999999999864 45686 7776 246999999999999999999999999999995
No 13
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans}
Probab=100.00 E-value=6.3e-56 Score=441.37 Aligned_cols=300 Identities=22% Similarity=0.355 Sum_probs=247.6
Q ss_pred ceeccccCCccCcccEEEEEEeCCCCceEEEEEECCCceeeEeCC--Ccc--------ccccCCCCCCCCCCCCCcccee
Q 012892 98 ATLPAKDGSVVGAGNYIVTVGIGTPKKDLSLIFDTGSDLTWTQCE--PCV--------KYCYEQKEPKFDPTVSQSYSNV 167 (454)
Q Consensus 98 ~~~p~~~~~~~~~~~Y~~~i~iGtP~q~~~li~DTGS~~~Wv~~~--~C~--------~~C~~~~~~~f~ps~SsT~~~~ 167 (454)
+.+|+.+ ++.+|+++|+||||||++.|++||||+++||+|. +|. ..|..+ +.|||++|+||+..
T Consensus 3 v~~~l~~----~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C~~~--~~y~~~~SsT~~~~ 76 (342)
T 2qzx_A 3 VAVTLHN----EAITYTADITVGSDNQKLNVIVDTGSSDLWIPDSNVICIPKWRGDKGDFCKSA--GSYSPASSRTSQNL 76 (342)
T ss_dssp EEEEEEE----CSSCEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSSSCCTTGGGTT--CCBCGGGCTTCEEE
T ss_pred eeEEEec----CCeEEEEEEEECCCCcEEEEEEeCCCCCeEEecCCCCccCccccCccccccCC--CcCCcccCCCcccC
Confidence 4567764 3678999999999999999999999999999865 674 247644 89999999999987
Q ss_pred cCCCccccccccCCCCCCCCCCCCceeeeEeCCCCeEEEeEEEEEEEeCCCccccceeeeeeecCCCCCCCcceeeecCC
Q 012892 168 SCSSTICTSLQSATGNSPACASSTCLYGIQYGDSSFSIGFFGKETLTLTPRDVFPNFLFGCGQNNRGLFGGAAGLMGLGR 247 (454)
Q Consensus 168 ~C~~~~C~~~~~~~~~~~~c~~~~c~~~~~Ygdgs~~~G~~~~Dtv~~~~~~~~~~~~FG~~~~~~~~~~~~~GilGLg~ 247 (454)
. |.|.+.|++|+.+.|.+++|+|+|++ ..++++.|||++... ..+||||||+
T Consensus 77 ~-----------------------~~~~i~Yg~Gs~~~G~~~~D~v~~g~-~~v~~~~fg~~~~~~----~~~GilGLg~ 128 (342)
T 2qzx_A 77 N-----------------------TRFDIKYGDGSYAKGKLYKDTVGIGG-VSVRDQLFANVWSTS----ARKGILGIGF 128 (342)
T ss_dssp E-----------------------EEEEEECTTSCEEEEEEEEEEEEETT-EEEEEEEEEEEEEEC----SSSCEEECSC
T ss_pred C-----------------------CcEEEEeCCCCeEEEEEEEEEEEECC-EEecceEEEEEEecC----CCcCEEEEcc
Confidence 5 69999999998889999999999998 689999999999864 4899999999
Q ss_pred CCC--------ccceehhhhc---CCcEEEecCCCCCCCceEEeccCCC----CCeeeEecccCCCCCccEEEEEeEEEE
Q 012892 248 DPI--------SLVSQTATKY---KKLFSYCLPSSASSTGHLTFGPGAS----KSVQFTPLSSISGGSSFYGLEMIGISV 312 (454)
Q Consensus 248 ~~~--------sl~~q~~~~~---~~~FS~~L~~~~~~~G~l~fGg~d~----~~~~~~pl~~~~~~~~~y~v~l~~i~v 312 (454)
..+ +++.|+..+. +++||+||.+.....|.|+|||+|+ +++.|+|+.. ..+|.|.|++|+|
T Consensus 129 ~~~~~~~~~~~~~~~~L~~qg~i~~~~Fs~~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~----~~~~~v~l~~i~v 204 (342)
T 2qzx_A 129 QSGEATEFDYDNLPISLRNQGIIGKAAYSLYLNSAEASTGQIIFGGIDKAKYSGSLVDLPITS----EKKLTVGLRSVNV 204 (342)
T ss_dssp GGGCSSSSCCCCHHHHHHHTTSSSSSEEEEECCCTTCSEEEEEETEEETTSBSSCCEEEECCC----SSSCEEEEEEEEE
T ss_pred ccccCCCccCccHHHHHHHCCCcCccEEEEEeCCCCCCCeEEEECccchhhEecceEEEeccC----CceEEEEEeEEEE
Confidence 865 4555655442 6899999997655689999999874 6899999987 4589999999999
Q ss_pred CcEEeeeccccccCCCEEEcccccCccCCHhHHHHHHHHHHHhhhcCCCCCCCccccccccccCCcccccCeEEEEEcCC
Q 012892 313 GGQKLSIAASVFTTAGTIIDSGTVITRLPPDAYTPLRTAFRQFMSKYPTAPALSLLDTCYDFSKYSTVTLPQISLFFSGG 392 (454)
Q Consensus 313 g~~~~~~~~~~~~~~~~iiDSGT~~~~lp~~~~~~l~~~l~~~~~~~~~~~~~~~~~~Cy~~~~~~~~~~P~i~~~f~gg 392 (454)
+++.+..+ ..+||||||++++||++++++|.+++.+.+.. ....+. .|.++|. .+|.|+|+|.||
T Consensus 205 ~g~~~~~~------~~aiiDSGTt~~~lP~~~~~~l~~~~~~~~~~-~~~~~~-----~~~~~C~---~~p~i~f~f~~g 269 (342)
T 2qzx_A 205 RGRNVDAN------TNVLLDSGTTISYFTRSIVRNILYAIGAQMKF-DSAGNK-----VYVADCK---TSGTIDFQFGNN 269 (342)
T ss_dssp TTEEEEEE------EEEEECTTCSSEEECHHHHHHHHHHHTCEEEE-CTTSCE-----EEEECTT---CCCEEEEEETTT
T ss_pred CCEecCCC------cCEEEeCCCCCEEcCHHHHHHHHHHhCCeeee-ccCCCc-----EEEEECC---CCCcEEEEECCC
Confidence 99987643 34999999999999999999999999876431 111111 2333443 279999999778
Q ss_pred cEEEEcCCCcEEEeC-----CCeEEEE-EEeCCCCCCceeechhhhceeEEEEECCCCEEEEEeCCCC
Q 012892 393 VEVSVDKTGIMYASN-----ISQVCLA-FAGNSDPTDVSIFGNTQQHTLEVVYDVAGGKVGFAAGGCS 454 (454)
Q Consensus 393 ~~~~l~~~~~~~~~~-----~~~~C~~-~~~~~~~~~~~IlG~~fl~~~~vvfD~~~~rigfa~~~C~ 454 (454)
++++||+++|+++.. .+..|++ +.+. +.||||+.|||++|+|||++++|||||+++|+
T Consensus 270 ~~~~i~~~~~~~~~~~~~~~~~~~C~~~i~~~----~~~iLG~~fl~~~y~vfD~~~~~igfA~~~~~ 333 (342)
T 2qzx_A 270 LKISVPVSEFLFQTYYTSGKPFPKCEVRIRES----EDNILGDNFLRSAYVVYNLDDKKISMAPVKYT 333 (342)
T ss_dssp EEEEEEGGGGEECCBCTTSCBCSSEEESEEEC----SSCEECHHHHTTEEEEEETTTTEEEEEEBCCC
T ss_pred cEEEEcHHHhcccccccCCCCCCccEEEEecC----CCcEeChHhhhcEEEEEECCCCEEEEEeeCCC
Confidence 999999999998742 2467995 5443 25999999999999999999999999999995
No 14
>4aa9_A Chymosin; hydrolase, aspartic peptidase, rennet; HET: NAG; 1.60A {Camelus dromedarius} PDB: 4aa8_A 1czi_E* 1cms_A 4cms_A 3cms_A
Probab=100.00 E-value=3.1e-56 Score=439.66 Aligned_cols=300 Identities=22% Similarity=0.425 Sum_probs=247.6
Q ss_pred eccccCCccCcccEEEEEEeCCCCceEEEEEECCCceeeEeCCCcc-ccccCCCCCCCCCCCCCccceecCCCccccccc
Q 012892 100 LPAKDGSVVGAGNYIVTVGIGTPKKDLSLIFDTGSDLTWTQCEPCV-KYCYEQKEPKFDPTVSQSYSNVSCSSTICTSLQ 178 (454)
Q Consensus 100 ~p~~~~~~~~~~~Y~~~i~iGtP~q~~~li~DTGS~~~Wv~~~~C~-~~C~~~~~~~f~ps~SsT~~~~~C~~~~C~~~~ 178 (454)
.|+. ++.+.+|+++|+||||||++.|++||||+++||+|++|. ..|..+ +.|||++|+||+...
T Consensus 3 ~~l~---n~~d~~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~~C~~~~C~~~--~~y~~~~SsT~~~~~---------- 67 (320)
T 4aa9_A 3 EPLT---SYLDSQYFGKIYIGTPPQEFTVVFDTGSSDLWVPSIYCKSNVCKNH--HRFDPRKSSTFRNLG---------- 67 (320)
T ss_dssp --------CCCCCCEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSHHHHTS--CCBCGGGCTTCEEEE----------
T ss_pred ccce---eccCCEEEEEEEECCCCeEEEEEEeCCCCceEEcCCCCCccccCCC--CCCCCCCCcCeEcCC----------
Confidence 4554 456789999999999999999999999999999999994 357755 899999999999975
Q ss_pred cCCCCCCCCCCCCceeeeEeCCCCeEEEeEEEEEEEeCCCccccceeeeeeecCCC-CC--CCcceeeecCCCCCc----
Q 012892 179 SATGNSPACASSTCLYGIQYGDSSFSIGFFGKETLTLTPRDVFPNFLFGCGQNNRG-LF--GGAAGLMGLGRDPIS---- 251 (454)
Q Consensus 179 ~~~~~~~~c~~~~c~~~~~Ygdgs~~~G~~~~Dtv~~~~~~~~~~~~FG~~~~~~~-~~--~~~~GilGLg~~~~s---- 251 (454)
|.|.+.|++|+ +.|.+++|+|+|++ ..++++.|||++...+ .+ ...+||||||++.++
T Consensus 68 -------------~~~~i~Yg~gs-~~G~~~~D~v~ig~-~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~ 132 (320)
T 4aa9_A 68 -------------KPLSIHYGTGS-MEGFLGYDTVTVSN-IVDPNQTVGLSTEQPGEVFTYSEFDGILGLAYPSLASEYS 132 (320)
T ss_dssp -------------EEEEEEETTEE-EEEEEEEEEEEETT-EEEEEEEEEEEEECCSHHHHSCCCSEEEECSCGGGSCTTC
T ss_pred -------------cEEEEEECCcE-EEEEEEEEEEEECC-EeecCeEEEEEEEcccccccccCcccEEecCcccccccCC
Confidence 69999999997 79999999999998 6999999999998766 22 257999999998665
Q ss_pred --cceehhhh---cCCcEEEecCCCCCCCceEEeccCCC----CCeeeEecccCCCCCccEEEEEeEEEECcEEeeeccc
Q 012892 252 --LVSQTATK---YKKLFSYCLPSSASSTGHLTFGPGAS----KSVQFTPLSSISGGSSFYGLEMIGISVGGQKLSIAAS 322 (454)
Q Consensus 252 --l~~q~~~~---~~~~FS~~L~~~~~~~G~l~fGg~d~----~~~~~~pl~~~~~~~~~y~v~l~~i~vg~~~~~~~~~ 322 (454)
++.++..+ .+++||+||.+. ...|.|+|||+|+ +++.|+|+.. +.+|.|++++|+|+++.+..+..
T Consensus 133 ~~~~~~l~~~g~i~~~~Fs~~l~~~-~~~G~l~fGg~d~~~~~g~l~~~p~~~----~~~w~v~l~~i~v~~~~~~~~~~ 207 (320)
T 4aa9_A 133 VPVFDNMMDRHLVARDLFSVYMDRN-GQGSMLTLGAIDPSYYTGSLHWVPVTL----QQYWQFTVDSVTINGVAVACVGG 207 (320)
T ss_dssp CCHHHHHHHTTCSSSSEEEEECCSS-SSCCEEEETCCCGGGEEEEEEEEECSS----BTTBEEEECEEEETTEEEESTTC
T ss_pred CCHHHHHHhCCCCCCceEEEEeCCC-CCCeEEEEcccCHHHccCceEEEEccc----CCceEEEEeEEEECCEEeccCCC
Confidence 33444433 168999999986 4589999999985 6899999986 68999999999999998865422
Q ss_pred cccCCCEEEcccccCccCCHhHHHHHHHHHHHhhhcCCCCCCCccccccccccCCcccccCeEEEEEcCCcEEEEcCCCc
Q 012892 323 VFTTAGTIIDSGTVITRLPPDAYTPLRTAFRQFMSKYPTAPALSLLDTCYDFSKYSTVTLPQISLFFSGGVEVSVDKTGI 402 (454)
Q Consensus 323 ~~~~~~~iiDSGT~~~~lp~~~~~~l~~~l~~~~~~~~~~~~~~~~~~Cy~~~~~~~~~~P~i~~~f~gg~~~~l~~~~~ 402 (454)
..+||||||++++||++++++|.+++++.. ...+ .|.++|.....+|+|+|+| +|++++|++++|
T Consensus 208 ----~~~iiDsGtt~~~lP~~~~~~i~~~~~~~~----~~~g------~~~~~C~~~~~~p~i~f~f-~g~~~~l~~~~y 272 (320)
T 4aa9_A 208 ----CQAILDTGTSVLFGPSSDILKIQMAIGATE----NRYG------EFDVNCGNLRSMPTVVFEI-NGRDYPLSPSAY 272 (320)
T ss_dssp ----EEEEECTTCSSEEEEHHHHHHHHHHTTCEE----CTTS------CEEECGGGGGGCCCEEEEE-TTEEEEECHHHH
T ss_pred ----cEEEEECCCCcEECCHHHHHHHHHHhCCcc----cCCC------cEEEeCCCCCcCceEEEEE-CCEEEEECHHHh
Confidence 459999999999999999999999986542 1111 2444555556789999999 789999999999
Q ss_pred EEEeCCCeEEE-EEEeCCCCCCceeechhhhceeEEEEECCCCEEEEEeCC
Q 012892 403 MYASNISQVCL-AFAGNSDPTDVSIFGNTQQHTLEVVYDVAGGKVGFAAGG 452 (454)
Q Consensus 403 ~~~~~~~~~C~-~~~~~~~~~~~~IlG~~fl~~~~vvfD~~~~rigfa~~~ 452 (454)
+.+. +..|+ ++... ..++.||||+.|||++|+|||++++|||||+++
T Consensus 273 ~~~~--~~~C~~~i~~~-~~~~~~ilG~~fl~~~y~vfD~~~~~igfA~a~ 320 (320)
T 4aa9_A 273 TSKD--QGFCTSGFQGD-NNSELWILGDVFIREYYSVFDRANNRVGLAKAI 320 (320)
T ss_dssp EEEE--TTEEEESEEEE-TTCCCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred ccCC--CCeEEEEEEcC-CCCCcEEEChHHhcceEEEEECCCCEEEEEecC
Confidence 9773 57899 57764 234679999999999999999999999999974
No 15
>1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A
Probab=100.00 E-value=9.8e-56 Score=437.69 Aligned_cols=303 Identities=26% Similarity=0.477 Sum_probs=249.1
Q ss_pred eeccccCCccCcccEEEEEEeCCCCceEEEEEECCCceeeEeCCCcc-ccccCCCCCCCCCCCCCccceecCCCcccccc
Q 012892 99 TLPAKDGSVVGAGNYIVTVGIGTPKKDLSLIFDTGSDLTWTQCEPCV-KYCYEQKEPKFDPTVSQSYSNVSCSSTICTSL 177 (454)
Q Consensus 99 ~~p~~~~~~~~~~~Y~~~i~iGtP~q~~~li~DTGS~~~Wv~~~~C~-~~C~~~~~~~f~ps~SsT~~~~~C~~~~C~~~ 177 (454)
.+|+. ..+.+|+++|.||||||++.|++||||+++||+|.+|. ..|..+ +.|||++|+||+...
T Consensus 4 ~~~l~----~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C~~~~C~~~--~~y~~~~SsT~~~~~--------- 68 (329)
T 1htr_B 4 YEPMA----YMDAAYFGEISIGTPPQNFLVLFDTGSSNLWVPSVYCQSQACTSH--SRFNPSESSTYSTNG--------- 68 (329)
T ss_dssp CCGGG----GTTCCEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSHHHHTS--CCBCGGGCTTCEEEE---------
T ss_pred eeeeE----EcCCEEEEEEEECCCCcEEEEEEcCCCccEEEecCCCCCcccCCC--CcCCCccCCCeEECC---------
Confidence 35665 35789999999999999999999999999999999994 358765 899999999999875
Q ss_pred ccCCCCCCCCCCCCceeeeEeCCCCeEEEeEEEEEEEeCCCccccceeeeeeecCCC-CC--CCcceeeecCCCCCccc-
Q 012892 178 QSATGNSPACASSTCLYGIQYGDSSFSIGFFGKETLTLTPRDVFPNFLFGCGQNNRG-LF--GGAAGLMGLGRDPISLV- 253 (454)
Q Consensus 178 ~~~~~~~~~c~~~~c~~~~~Ygdgs~~~G~~~~Dtv~~~~~~~~~~~~FG~~~~~~~-~~--~~~~GilGLg~~~~sl~- 253 (454)
|.|.+.|++|+ +.|.+++|+|+|++ ..++++.|||++...+ .+ ...+||||||++.++..
T Consensus 69 --------------~~~~i~Yg~gs-~~G~~~~D~v~~g~-~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~ 132 (329)
T 1htr_B 69 --------------QTFSLQYGSGS-LTGFFGYDTLTVQS-IQVPNQEFGLSENEPGTNFVYAQFDGIMGLAYPALSVDE 132 (329)
T ss_dssp --------------EEEEEEETTEE-EEEEEEEEEEEETT-EEEEEEEEEEESSCSSGGGGGCSCCEEEECCCCSCCCTT
T ss_pred --------------cEEEEEeCCCC-eEEEEEeeeEEEcc-eEECceEEEEEEEccccccccCCCceEEecCCCcccccC
Confidence 69999999997 59999999999998 6899999999998765 23 36899999999987643
Q ss_pred -----eehhhh---cCCcEEEecCCCCCC-CceEEeccCCC----CCeeeEecccCCCCCccEEEEEeEEEECcEEeeec
Q 012892 254 -----SQTATK---YKKLFSYCLPSSASS-TGHLTFGPGAS----KSVQFTPLSSISGGSSFYGLEMIGISVGGQKLSIA 320 (454)
Q Consensus 254 -----~q~~~~---~~~~FS~~L~~~~~~-~G~l~fGg~d~----~~~~~~pl~~~~~~~~~y~v~l~~i~vg~~~~~~~ 320 (454)
.|+..+ .+++||+||.+.... .|.|+|||+|+ +++.|+|+.. +.+|.|.|++|+|+++.+...
T Consensus 133 ~~~~~~~l~~qg~i~~~~Fs~~L~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~----~~~~~v~l~~i~v~~~~~~~~ 208 (329)
T 1htr_B 133 ATTAMQGMVQEGALTSPVFSVYLSNQQGSSGGAVVFGGVDSSLYTGQIYWAPVTQ----ELYWQIGIEEFLIGGQASGWC 208 (329)
T ss_dssp CCSHHHHHHHTTCSSSSEEEEEECSSCSSEEEEEEESSCCGGGEEEEEEEEEBCS----SSSCEEEECEEEETTEECCTT
T ss_pred CCCHHHHHHhcCCCCCCEEEEEEcCCCCCCCcEEEEcccCHHHcCCceEEEECCC----CceEEEEEeEEEECCceeeec
Confidence 333333 168999999987544 79999999985 5899999986 679999999999999876411
Q ss_pred cccccCCCEEEcccccCccCCHhHHHHHHHHHHHhhhcCCCCCCCccccccccccCCcccccCeEEEEEcCCcEEEEcCC
Q 012892 321 ASVFTTAGTIIDSGTVITRLPPDAYTPLRTAFRQFMSKYPTAPALSLLDTCYDFSKYSTVTLPQISLFFSGGVEVSVDKT 400 (454)
Q Consensus 321 ~~~~~~~~~iiDSGT~~~~lp~~~~~~l~~~l~~~~~~~~~~~~~~~~~~Cy~~~~~~~~~~P~i~~~f~gg~~~~l~~~ 400 (454)
... ..+||||||++++||+++|++|.+++++.. . ..+. ....|+. ...+|+|+|+| +|++++|+++
T Consensus 209 ~~~---~~aiiDSGTt~~~lp~~~~~~l~~~~~~~~---~-~~g~-~~~~C~~-----~~~~P~i~f~f-~g~~~~i~~~ 274 (329)
T 1htr_B 209 SEG---CQAIVDTGTSLLTVPQQYMSALLQATGAQE---D-EYGQ-FLVNCNS-----IQNLPSLTFII-NGVEFPLPPS 274 (329)
T ss_dssp TTC---EEEEECTTCCSEEEEGGGHHHHHHHHTCEE---C-TTSC-EEECGGG-----GGGSCCEEEEE-TTEEEEECHH
T ss_pred CCC---ceEEEecCCccEECCHHHHHHHHHHhCCee---c-CCCe-EEEeCCC-----cccCCcEEEEE-CCEEEEECHH
Confidence 111 469999999999999999999999987652 1 1121 2234643 45789999999 7899999999
Q ss_pred CcEEEeCCCeEEE-EEEeCC---CCCC-ceeechhhhceeEEEEECCCCEEEEEeCC
Q 012892 401 GIMYASNISQVCL-AFAGNS---DPTD-VSIFGNTQQHTLEVVYDVAGGKVGFAAGG 452 (454)
Q Consensus 401 ~~~~~~~~~~~C~-~~~~~~---~~~~-~~IlG~~fl~~~~vvfD~~~~rigfa~~~ 452 (454)
+|+++.. ..|+ +|.+.+ ..++ .||||+.|||++|+|||++++|||||+++
T Consensus 275 ~y~~~~~--g~C~~~~~~~~~~~~~~~~~~iLG~~fl~~~yvvfD~~~~~igfa~~~ 329 (329)
T 1htr_B 275 SYILSNN--GYCTVGVEPTYLSSQNGQPLWILGDVFLRSYYSVYDLGNNRVGFATAA 329 (329)
T ss_dssp HHEEECS--SCEEESEEEECCCCTTSSCEEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred HhcccCC--CEEEEEEEECCCCCCCCCceEEEChHHhccEEEEEECCCCEEEEEeCC
Confidence 9999875 3899 677643 1234 89999999999999999999999999874
No 16
>2bju_A Plasmepsin II; aspartic proteinase, drug design, malaria, aspartyl protease, glycoprotein, hydrolase, signal, zymogen; HET: IH4; 1.56A {Plasmodium falciparum} SCOP: b.50.1.2 PDB: 1pfz_A 1xdh_A* 1lf3_A 1w6h_A* 1w6i_A* 1lf4_A* 1lf2_A* 1lee_A* 1m43_A* 2igx_A* 1sme_A* 1me6_A* 1xe6_A* 1xe5_A* 2igy_A* 2r9b_A 3f9q_A 3qrv_A 3qs1_A* 2anl_A* ...
Probab=100.00 E-value=7.5e-56 Score=453.07 Aligned_cols=301 Identities=19% Similarity=0.324 Sum_probs=248.7
Q ss_pred ceeccccCCccCcccEEEEEEeCCCCceEEEEEECCCceeeEeCCCcc-ccccCCCCCCCCCCCCCccceecCCCccccc
Q 012892 98 ATLPAKDGSVVGAGNYIVTVGIGTPKKDLSLIFDTGSDLTWTQCEPCV-KYCYEQKEPKFDPTVSQSYSNVSCSSTICTS 176 (454)
Q Consensus 98 ~~~p~~~~~~~~~~~Y~~~i~iGtP~q~~~li~DTGS~~~Wv~~~~C~-~~C~~~~~~~f~ps~SsT~~~~~C~~~~C~~ 176 (454)
..+|+. +..+.+|+++|+||||||++.|++||||+++||+|.+|. ..|..+ +.|||++|+||+...
T Consensus 128 ~~~~L~---n~~~~~Y~~~I~IGTP~Q~~~vi~DTGSs~lWV~~~~C~~~~C~~~--~~ydps~SsT~~~~~-------- 194 (453)
T 2bju_A 128 DNIELV---DFQNIMFYGDAEVGDNQQPFTFILDTGSANLWVPSVKCTTAGCLTK--HLYDSSKSRTYEKDG-------- 194 (453)
T ss_dssp EEEEEE---EETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSTTGGGS--CCBCGGGCTTCEEEE--------
T ss_pred CceeeE---ecCCCEEEEEEEECCCCeEEEEEEECCCcceEEeccCCCccccCCC--CcCCCccCCceeECC--------
Confidence 457776 345789999999999999999999999999999999994 468765 899999999999875
Q ss_pred cccCCCCCCCCCCCCceeeeEeCCCCeEEEeEEEEEEEeCCCccccceeeeeeecCC--CC-C--CCcceeeecCCCCCc
Q 012892 177 LQSATGNSPACASSTCLYGIQYGDSSFSIGFFGKETLTLTPRDVFPNFLFGCGQNNR--GL-F--GGAAGLMGLGRDPIS 251 (454)
Q Consensus 177 ~~~~~~~~~~c~~~~c~~~~~Ygdgs~~~G~~~~Dtv~~~~~~~~~~~~FG~~~~~~--~~-~--~~~~GilGLg~~~~s 251 (454)
|.|.+.|++|+ +.|.+++|+|+|++ .+++ +.|||++... +. + ...+||||||++.++
T Consensus 195 ---------------~~~~i~YgdGs-~~G~~~~Dtv~ig~-~~v~-~~Fg~a~~~~~~g~~f~~~~~dGIlGLg~~~~s 256 (453)
T 2bju_A 195 ---------------TKVEMNYVSGT-VSGFFSKDLVTVGN-LSLP-YKFIEVIDTNGFEPTYTASTFDGILGLGWKDLS 256 (453)
T ss_dssp ---------------EEEEEECSSSE-EEEEEEEEEEEETT-EEEE-EEEEEEEECGGGTTHHHHSSCCEEEECSCGGGS
T ss_pred ---------------cEEEEEcCCCC-eEEEEEEEEEEEeC-cEEE-EEEEEEEEecccCccccccCCceeEeccCCccc
Confidence 69999999998 89999999999998 6888 9999999886 42 2 368999999998776
Q ss_pred cc------eehhhh---cCCcEEEecCCCCCCCceEEeccCCC----CCeeeEecccCCCCCccEEEEEeEEEECcEEee
Q 012892 252 LV------SQTATK---YKKLFSYCLPSSASSTGHLTFGPGAS----KSVQFTPLSSISGGSSFYGLEMIGISVGGQKLS 318 (454)
Q Consensus 252 l~------~q~~~~---~~~~FS~~L~~~~~~~G~l~fGg~d~----~~~~~~pl~~~~~~~~~y~v~l~~i~vg~~~~~ 318 (454)
.. .++..+ .+++||+||.+.+...|.|+|||+|+ +++.|+|+.. +.+|.|.++ |+|++ .+
T Consensus 257 ~~~~~~~~~~L~~qg~i~~~~FS~~L~~~~~~~G~l~fGg~D~~~y~G~l~~~pv~~----~~~w~V~l~-I~Vgg-~~- 329 (453)
T 2bju_A 257 IGSVDPIVVELKNQNKIENALFTFYLPVHDKHTGFLTIGGIEERFYEGPLTYEKLNH----DLYWQITLD-AHVGN-IM- 329 (453)
T ss_dssp TTCCCCHHHHHHHTTSSSSCEEEEECCBTTTBCEEEEESSCCGGGEEEEEEEEEEEE----ETTEEEEEE-EEETT-EE-
T ss_pred ccCCCcHHHHHHHCCCCCCCEEEEEeCCCCCCCeEEEECCCCHHHcCCceEEEecCC----CceEEEEEE-EEECc-EE-
Confidence 43 333332 16999999998755689999999985 6899999987 679999999 99999 43
Q ss_pred eccccccCCCEEEcccccCccCCHhHHHHHHHHHHHhhhcCCCCCCCccccccccccCCcccccCeEEEEEcCCcEEEEc
Q 012892 319 IAASVFTTAGTIIDSGTVITRLPPDAYTPLRTAFRQFMSKYPTAPALSLLDTCYDFSKYSTVTLPQISLFFSGGVEVSVD 398 (454)
Q Consensus 319 ~~~~~~~~~~~iiDSGT~~~~lp~~~~~~l~~~l~~~~~~~~~~~~~~~~~~Cy~~~~~~~~~~P~i~~~f~gg~~~~l~ 398 (454)
+ . ..++||||||++++||++++++|.+++++. +...+. .|.++|.. ..+|+|+|+| ||++++||
T Consensus 330 ~--~---~~~aIiDSGTsl~~lP~~~~~~l~~~i~~~----~~~~g~-----~~~v~C~~-~~~P~itf~f-gg~~~~l~ 393 (453)
T 2bju_A 330 L--E---KANCIVDSGTSAITVPTDFLNKMLQNLDVI----KVPFLP-----FYVTLCNN-SKLPTFEFTS-ENGKYTLE 393 (453)
T ss_dssp E--E---EEEEEECTTCCSEEECHHHHHHHTTTSSCE----ECTTSS-----CEEEETTC-TTCCCEEEEC-SSCEEEEC
T ss_pred e--c---cccEEEcCCCCeEecCHHHHHHHHHHhCCc----ccCCCc-----eEEEecCC-CCCCcEEEEE-CCEEEEEC
Confidence 2 1 146999999999999999999999888653 111121 23334443 5689999999 78999999
Q ss_pred CCCcEEEeC--CCeEEE-EEEeCCCCCCceeechhhhceeEEEEECCCCEEEEEeCC
Q 012892 399 KTGIMYASN--ISQVCL-AFAGNSDPTDVSIFGNTQQHTLEVVYDVAGGKVGFAAGG 452 (454)
Q Consensus 399 ~~~~~~~~~--~~~~C~-~~~~~~~~~~~~IlG~~fl~~~~vvfD~~~~rigfa~~~ 452 (454)
+++|+++.. .+..|+ +|.+.+...+.||||++|||++|+|||++++|||||+++
T Consensus 394 ~~~yi~~~~~~g~~~C~~~~~~~~~~~~~~ILGd~Flr~~yvVFD~~n~rIGfA~~~ 450 (453)
T 2bju_A 394 PEYYLQHIEDVGPGLCMLNIIGLDFPVPTFILGDPFMRKYFTVFDYDNHSVGIALAK 450 (453)
T ss_dssp HHHHEEECTTTSTTEEEECEEECCCSSCEEEECHHHHHHEEEEEETTTTEEEEEEEC
T ss_pred HHHhEeecccCCCceEEEEEEeCCCCCCCEEECHHHhhcEEEEEECCCCEEEEEEcc
Confidence 999999865 346899 787764334589999999999999999999999999864
No 17
>3k1w_A Renin; protease, alternative splicing, aspartyl protease, cleavage on PAIR of basic residues, disease mutation, disulfide bond, glycoprotein; HET: BFX NDG HSQ; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 3d91_A* 3g70_A* 3g6z_A* 3own_A* 2iko_A* 1bbs_A* 1rne_A* 2bkt_A* 2bks_A* 2iku_A* 2il2_A* 2ren_A* 2v0z_C* 2v10_C* 2v11_C* 2v12_C* 2v13_A* 2v16_C* 3g72_A* 3oot_A* ...
Probab=100.00 E-value=1.1e-55 Score=439.38 Aligned_cols=306 Identities=20% Similarity=0.370 Sum_probs=253.2
Q ss_pred CcceeccccCCccCcccEEEEEEeCCCCceEEEEEECCCceeeEeCCCcc---ccccCCCCCCCCCCCCCccceecCCCc
Q 012892 96 DDATLPAKDGSVVGAGNYIVTVGIGTPKKDLSLIFDTGSDLTWTQCEPCV---KYCYEQKEPKFDPTVSQSYSNVSCSST 172 (454)
Q Consensus 96 ~~~~~p~~~~~~~~~~~Y~~~i~iGtP~q~~~li~DTGS~~~Wv~~~~C~---~~C~~~~~~~f~ps~SsT~~~~~C~~~ 172 (454)
+...+|+.+ ..+.+|+++|+||||||++.|++||||+++||+|..|. ..|..+ +.|+|++|+||+...
T Consensus 6 ~~~~~~l~n---~~d~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~~~C~~~--~~y~~~~SsT~~~~~---- 76 (341)
T 3k1w_A 6 TTSSVILTN---YMDTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSSKCSRLYTACVYH--KLFDASDSSSYKHNG---- 76 (341)
T ss_dssp BCEEEEEEE---ETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTSCTTCHHHHTS--CCBCGGGCTTCEEEE----
T ss_pred CCccccceE---ccCCEEEEEEEEcCCCcEEEEEEeCCCcceEEccCCCCCCCCcccCC--CCCCCCcCcCeeECC----
Confidence 456778873 45789999999999999999999999999999999995 258755 899999999999864
Q ss_pred cccccccCCCCCCCCCCCCceeeeEeCCCCeEEEeEEEEEEEeCCCccccceeeeeeecCCCC---CCCcceeeecCCCC
Q 012892 173 ICTSLQSATGNSPACASSTCLYGIQYGDSSFSIGFFGKETLTLTPRDVFPNFLFGCGQNNRGL---FGGAAGLMGLGRDP 249 (454)
Q Consensus 173 ~C~~~~~~~~~~~~c~~~~c~~~~~Ygdgs~~~G~~~~Dtv~~~~~~~~~~~~FG~~~~~~~~---~~~~~GilGLg~~~ 249 (454)
|.|.+.|++|+ +.|.+++|+|+|++ ..+ ++.|||++...+. ....+||||||++.
T Consensus 77 -------------------~~~~i~Yg~gs-~~G~~~~D~v~ig~-~~v-~~~fg~~~~~~~~~~~~~~~~GilGLg~~~ 134 (341)
T 3k1w_A 77 -------------------TELTLRYSTGT-VSGFLSQDIITVGG-ITV-TQMFGEVTEMPALPFMLAEFDGVVGMGFIE 134 (341)
T ss_dssp -------------------EEEEEEETTEE-EEEEEEEEEEEETT-EEE-EEEEEEEEECCHHHHTTCSSSEEEECSCGG
T ss_pred -------------------CEEEEEECCcE-EEEEEEEEEEEECC-cee-eEEEEEEEEccccccccCCcceEEECCchh
Confidence 69999999997 89999999999998 688 9999999988652 23579999999987
Q ss_pred Cc------cceehhhh---cCCcEEEecCCCC----CCCceEEeccCCC----CCeeeEecccCCCCCccEEEEEeEEEE
Q 012892 250 IS------LVSQTATK---YKKLFSYCLPSSA----SSTGHLTFGPGAS----KSVQFTPLSSISGGSSFYGLEMIGISV 312 (454)
Q Consensus 250 ~s------l~~q~~~~---~~~~FS~~L~~~~----~~~G~l~fGg~d~----~~~~~~pl~~~~~~~~~y~v~l~~i~v 312 (454)
++ ++.++..+ .+++||+||.+.. ...|.|+|||+|+ +++.|+|+.. +.+|.|.+++|+|
T Consensus 135 ~s~~~~~~~~~~l~~qg~i~~~~Fs~~l~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~----~~~w~v~l~~i~v 210 (341)
T 3k1w_A 135 QAIGRVTPIFDNIISQGVLKEDVFSFYYNRDSENSQSLGGQIVLGGSDPQHYEGNFHYINLIK----TGVWQIQMKGVSV 210 (341)
T ss_dssp GCGGGCCCHHHHHHHHTCBSSSEEEEEECCCC-----CCEEEEESSCCGGGEEEEEEEEECSS----TTSCEEEECCEEE
T ss_pred hcccCCCCHHHHHHHCCCCCCCEEEEEEeCCCCcCCCCCCEEEECccChHHccCceEEEecCC----CCEEEEEEeEEEE
Confidence 76 33444433 1689999999864 2489999999985 5899999986 6899999999999
Q ss_pred CcEEeeeccccccCCCEEEcccccCccCCHhHHHHHHHHHHHhhhcCCCCCCCccccccccccCCcccccCeEEEEEcCC
Q 012892 313 GGQKLSIAASVFTTAGTIIDSGTVITRLPPDAYTPLRTAFRQFMSKYPTAPALSLLDTCYDFSKYSTVTLPQISLFFSGG 392 (454)
Q Consensus 313 g~~~~~~~~~~~~~~~~iiDSGT~~~~lp~~~~~~l~~~l~~~~~~~~~~~~~~~~~~Cy~~~~~~~~~~P~i~~~f~gg 392 (454)
+++.+..+.. ..+||||||++++||++++++|.+++++.. . ..+ |.++|.....+|+|+|+| +|
T Consensus 211 ~~~~~~~~~~----~~~iiDsGtt~~~lP~~~~~~i~~~~~~~~---~-~~g-------~~~~C~~~~~~p~i~f~f-~g 274 (341)
T 3k1w_A 211 GSSTLLCEDG----CLALVDTGASYISGSTSSIEKLMEALGAKK---R-LFD-------YVVKCNEGPTLPDISFHL-GG 274 (341)
T ss_dssp TTEEEECTTC----EEEEECTTCSSEEECHHHHHHHHHHHTCEE---C-SSC-------EEEEGGGGGGCCCEEEEE-TT
T ss_pred CCEEeecCCC----CEEEEECCCChhcCCHHHHHHHHHHcCCee---c-CCC-------eEEeCCCCCcCCcEEEEE-CC
Confidence 9997644332 459999999999999999999999997652 1 111 444455556789999999 78
Q ss_pred cEEEEcCCCcEEEeC--CCeEEE-EEEeCC---CCCCceeechhhhceeEEEEECCCCEEEEEeCC
Q 012892 393 VEVSVDKTGIMYASN--ISQVCL-AFAGNS---DPTDVSIFGNTQQHTLEVVYDVAGGKVGFAAGG 452 (454)
Q Consensus 393 ~~~~l~~~~~~~~~~--~~~~C~-~~~~~~---~~~~~~IlG~~fl~~~~vvfD~~~~rigfa~~~ 452 (454)
++++|++++|+++.. .+..|+ ++...+ ...+.||||+.|||++|+|||++++|||||+++
T Consensus 275 ~~~~l~~~~~~~~~~~~~~~~C~~~i~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~a~ 340 (341)
T 3k1w_A 275 KEYTLTSADYVFQESYSSKKLCTLAIHAMDIPPPTGPTWALGATFIRKFYTEFDRRNNRIGFALAR 340 (341)
T ss_dssp EEEEECHHHHBCCSCCCTTSEEEBSEEECCCCTTTCSCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred EEEEECHHHheeEccCCCCCeEEeEEEecccCCCCCCeEEEChHHhcceEEEEeCCCCEEEEEECC
Confidence 999999999998753 357899 677642 234689999999999999999999999999975
No 18
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A*
Probab=100.00 E-value=1.6e-55 Score=436.15 Aligned_cols=298 Identities=25% Similarity=0.373 Sum_probs=243.4
Q ss_pred cCcccEEEEEEeCCCCceEEEEEECCCceeeEeCCCccccccCCCCCCCCCCCCCccceecCCCccccccccCCCCCCCC
Q 012892 108 VGAGNYIVTVGIGTPKKDLSLIFDTGSDLTWTQCEPCVKYCYEQKEPKFDPTVSQSYSNVSCSSTICTSLQSATGNSPAC 187 (454)
Q Consensus 108 ~~~~~Y~~~i~iGtP~q~~~li~DTGS~~~Wv~~~~C~~~C~~~~~~~f~ps~SsT~~~~~C~~~~C~~~~~~~~~~~~c 187 (454)
..+.+|+++|+||||||++.|++||||+++||+|.+|.. |..+..+.|||++|+|++.++
T Consensus 12 ~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~~-~~~~~~~~y~~~~SsT~~~~~------------------- 71 (329)
T 3c9x_A 12 SADSEYITSVSIGTPAQVLPLDFDTGSSDLWVFSSETPK-SSATGHAIYTPSKSSTSKKVS------------------- 71 (329)
T ss_dssp TTCCCEEEEEEETTTTEEEEEEEETTCCCEEECBTTSCH-HHHTTSCCBCGGGCTTCEECT-------------------
T ss_pred CCCCEEEEEEEECCCCeEEEEEEcCCCCCeEEecCCCCc-cccCCCCcCCcccCcCceEcC-------------------
Confidence 457899999999999999999999999999999999964 665556899999999999864
Q ss_pred CCCCceeeeEeCCCCeEEEeEEEEEEEeCCCccccceeeeeeecCCCCC---CCcceeeecCCCCCccce---------e
Q 012892 188 ASSTCLYGIQYGDSSFSIGFFGKETLTLTPRDVFPNFLFGCGQNNRGLF---GGAAGLMGLGRDPISLVS---------Q 255 (454)
Q Consensus 188 ~~~~c~~~~~Ygdgs~~~G~~~~Dtv~~~~~~~~~~~~FG~~~~~~~~~---~~~~GilGLg~~~~sl~~---------q 255 (454)
.|.|.+.|++|+.+.|.+++|+|+|++ ..++++.|||++...+.+ ...+||||||++.++.++ |
T Consensus 72 ---~~~~~i~Yg~Gs~~~G~~~~D~v~ig~-~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~~~~ 147 (329)
T 3c9x_A 72 ---GASWSISYGDGSSSSGDVYTDKVTIGG-FSVNTQGVESATRVSTEFVQDTVISGLVGLAFDSGNQVRPHPQKTWFSN 147 (329)
T ss_dssp ---TCBEEEECTTSCEEEEEEEEEEEEETT-EEEEEEEEEEEEEECHHHHHCTTCCEEEECSCGGGCCCBSSCCCCHHHH
T ss_pred ---CCeEEEEeCCCCcEEEEEEEEEEEECC-EEEcceEEEEEEecCccccccCCCceeEEeCcccccccCCCCCCCHHHH
Confidence 268999999998899999999999998 689999999999876533 368999999998877543 3
Q ss_pred hhhhc-CCcEEEecCCCCCCCceEEeccCCC----CCeeeEecccCCCCCccEEEEEeEEEECcEEeeeccccccCCCEE
Q 012892 256 TATKY-KKLFSYCLPSSASSTGHLTFGPGAS----KSVQFTPLSSISGGSSFYGLEMIGISVGGQKLSIAASVFTTAGTI 330 (454)
Q Consensus 256 ~~~~~-~~~FS~~L~~~~~~~G~l~fGg~d~----~~~~~~pl~~~~~~~~~y~v~l~~i~vg~~~~~~~~~~~~~~~~i 330 (454)
+..+. +++||+||.+. ..|.|+|||+|+ +++.|+|+.. ...+|.|.|++|+|+++.+. ... ..+|
T Consensus 148 l~~~i~~~~FS~~l~~~--~~G~l~fGg~d~~~~~g~l~~~p~~~---~~~~~~v~l~~i~v~~~~~~--~~~---~~ai 217 (329)
T 3c9x_A 148 AASSLAEPLFTADLRHG--QNGSYNFGYIDTSVAKGPVAYTPVDN---SQGFWEFTASGYSVGGGKLN--RNS---IDGI 217 (329)
T ss_dssp HHTTSSSSEEEEECCSS--SCEEEEESSCCGGGCSSCEEEEECBC---TTSSCEEEECCEEETTCCCC--SCC---EEEE
T ss_pred HHHhcCCCEEEEEecCC--CCcEEEEeCcChhhcccceEEEEccC---CCceEEEEEeeEEECCEecc--CCC---ceEE
Confidence 33222 68999999874 479999999884 7999999985 25789999999999998753 222 3599
Q ss_pred EcccccCccCCHhHHHHHHHHHHHhhhcCCCCCCCccccccccccCCcccccCeEEEEEcCCcEEEEcCCCcEEEeC--C
Q 012892 331 IDSGTVITRLPPDAYTPLRTAFRQFMSKYPTAPALSLLDTCYDFSKYSTVTLPQISLFFSGGVEVSVDKTGIMYASN--I 408 (454)
Q Consensus 331 iDSGT~~~~lp~~~~~~l~~~l~~~~~~~~~~~~~~~~~~Cy~~~~~~~~~~P~i~~~f~gg~~~~l~~~~~~~~~~--~ 408 (454)
|||||++++||++++++|.+++.++. +....+. ...+|+ ..+|+|+|+| +|+++.||+++|+++.. .
T Consensus 218 iDSGTt~~~lp~~~~~~i~~~i~~a~--~~~~~~~-~~~~C~-------~~~P~i~f~f-~g~~~~ip~~~~~~~~~~~~ 286 (329)
T 3c9x_A 218 ADTGTTLLLLDDNVVDAYYANVQSAQ--YDNQQEG-VVFDCD-------EDLPSFSFGV-GSSTITIPGDLLNLTPLEEG 286 (329)
T ss_dssp ECTTCCSEEECHHHHHHHHTTCTTCE--EETTTTE-EEEETT-------CCCCCEEEEE-TTEEEEECGGGGEEEESSTT
T ss_pred EECCCCcEeCCHHHHHHHHHhCCCcE--EcCCCCE-EEEECC-------CCCCcEEEEE-CCEEEEECHHHeeeeccCCC
Confidence 99999999999999999998874431 1111111 112353 3689999999 68999999999998753 2
Q ss_pred CeEEEE-EEeCCCCCCceeechhhhceeEEEEECCCCEEEEEeC
Q 012892 409 SQVCLA-FAGNSDPTDVSIFGNTQQHTLEVVYDVAGGKVGFAAG 451 (454)
Q Consensus 409 ~~~C~~-~~~~~~~~~~~IlG~~fl~~~~vvfD~~~~rigfa~~ 451 (454)
...|++ +.+.+ ..+.||||+.|||++|+|||++++|||||+.
T Consensus 287 ~~~C~~~i~~~~-~~~~~ILG~~fl~~~y~vfD~~~~riGfA~~ 329 (329)
T 3c9x_A 287 SSTCFGGLQSSS-GIGINIFGDVALKAALVVFDLGNERLGWAQK 329 (329)
T ss_dssp CSEEEESEEECT-TTTSEEECHHHHTTEEEEEETTTTEEEEEEC
T ss_pred CCeEEEEEEcCC-CCCcEEEChHHhccEEEEEECCCCEEeEecC
Confidence 478995 66543 3468999999999999999999999999984
No 19
>1miq_A Plasmepsin; aspartic proteinase zymogen, domain opening, hydrolase; 2.50A {Plasmodium vivax} SCOP: b.50.1.2 PDB: 1ls5_A*
Probab=100.00 E-value=5.1e-55 Score=439.41 Aligned_cols=300 Identities=21% Similarity=0.363 Sum_probs=249.6
Q ss_pred ceeccccCCccCcccEEEEEEeCCCCceEEEEEECCCceeeEeCCCcc-ccccCCCCCCCCCCCCCccceecCCCccccc
Q 012892 98 ATLPAKDGSVVGAGNYIVTVGIGTPKKDLSLIFDTGSDLTWTQCEPCV-KYCYEQKEPKFDPTVSQSYSNVSCSSTICTS 176 (454)
Q Consensus 98 ~~~p~~~~~~~~~~~Y~~~i~iGtP~q~~~li~DTGS~~~Wv~~~~C~-~~C~~~~~~~f~ps~SsT~~~~~C~~~~C~~ 176 (454)
..+|+.+ ..+.+|+++|+||||||++.|++||||+++||+|.+|. ..|..+ +.|||++|+||+...
T Consensus 52 ~~~pl~~---~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~~~~C~~~--~~y~~~~SsT~~~~~-------- 118 (375)
T 1miq_A 52 DVIELDD---VANIMFYGEGEVGDNHQKFMLIFDTGSANLWVPSKKCNSSGCSIK--NLYDSSKSKSYEKDG-------- 118 (375)
T ss_dssp BCCCGGG---TBCEEEECCCEETTTTEECCEEEETTCCCEEEEBTTCCSSGGGGS--CCBCGGGCTTCEEEE--------
T ss_pred ceEEccc---CCCCEEEEEEEECCCCeEEEEEEeCCCcceEEccCCCCcccccCC--CcCCCccCCceEECC--------
Confidence 4567763 45789999999999999999999999999999999994 468765 899999999999875
Q ss_pred cccCCCCCCCCCCCCceeeeEeCCCCeEEEeEEEEEEEeCCCccccceeeeeeec----CCCCC--CCcceeeecCCCCC
Q 012892 177 LQSATGNSPACASSTCLYGIQYGDSSFSIGFFGKETLTLTPRDVFPNFLFGCGQN----NRGLF--GGAAGLMGLGRDPI 250 (454)
Q Consensus 177 ~~~~~~~~~~c~~~~c~~~~~Ygdgs~~~G~~~~Dtv~~~~~~~~~~~~FG~~~~----~~~~~--~~~~GilGLg~~~~ 250 (454)
|.|.+.|++|+ +.|.+++|+|+|++ ..+++ .|||++. +. .| ...+||||||++.+
T Consensus 119 ---------------~~~~i~Yg~Gs-~~G~~~~Dtv~ig~-~~v~~-~Fg~~~~~~~~~~-~f~~~~~dGilGLg~~~~ 179 (375)
T 1miq_A 119 ---------------TKVDITYGSGT-VKGFFSKDLVTLGH-LSMPY-KFIEVTDTDDLEP-IYSSVEFDGILGLGWKDL 179 (375)
T ss_dssp ---------------EEEEEEETTEE-EEEEEEEEEEEETT-EEEEE-EEEEEEECGGGTT-HHHHSCCCEEEECSSCCT
T ss_pred ---------------cEEEEEeCCCe-EEEEEEEEEEEEcC-ceECc-EEEEEEecccccc-ccccCCCceEEeCCCCcc
Confidence 69999999997 89999999999998 68999 9999998 44 23 36899999999987
Q ss_pred ccc------eehhhh---cCCcEEEecCCCCCCCceEEeccCCC----CCeeeEecccCCCCCccEEEEEeEEEECcEEe
Q 012892 251 SLV------SQTATK---YKKLFSYCLPSSASSTGHLTFGPGAS----KSVQFTPLSSISGGSSFYGLEMIGISVGGQKL 317 (454)
Q Consensus 251 sl~------~q~~~~---~~~~FS~~L~~~~~~~G~l~fGg~d~----~~~~~~pl~~~~~~~~~y~v~l~~i~vg~~~~ 317 (454)
+.. .|+..+ .+++||+||.+.+...|.|+|||+|+ +++.|+|+.. +.+|.|.++ |+|+++.+
T Consensus 180 s~~~~~~~~~~l~~qg~i~~~~FS~~L~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~----~~~w~v~l~-i~v~g~~~ 254 (375)
T 1miq_A 180 SIGSIDPIVVELKNQNKIDNALFTFYLPVHDVHAGYLTIGGIEEKFYEGNITYEKLNH----DLYWQIDLD-VHFGKQTM 254 (375)
T ss_dssp TCSSCCCHHHHHHHTTSSSSSEEEEECCTTCTTEEEEEESSCCGGGEEEEEEEEEBSS----SSSSEEEEE-EEETTEEE
T ss_pred cccCCCCHHHHHHhccCcCCCEEEEEecCCCCCCeEEEEcccCHHHcCCceEEEecCC----CceEEEEEE-EEECCEEc
Confidence 643 233332 16999999998754689999999985 6899999986 679999999 99999887
Q ss_pred eeccccccCCCEEEcccccCccCCHhHHHHHHHHHHHhhhcCCCCCCCccccccccccCCcccccCeEEEEEcCCcEEEE
Q 012892 318 SIAASVFTTAGTIIDSGTVITRLPPDAYTPLRTAFRQFMSKYPTAPALSLLDTCYDFSKYSTVTLPQISLFFSGGVEVSV 397 (454)
Q Consensus 318 ~~~~~~~~~~~~iiDSGT~~~~lp~~~~~~l~~~l~~~~~~~~~~~~~~~~~~Cy~~~~~~~~~~P~i~~~f~gg~~~~l 397 (454)
.. ..+||||||++++||++++++|.+++++.. +...+. +..+|+ . ..+|+|+|+| ||++++|
T Consensus 255 ----~~---~~aiiDSGTs~~~lP~~~~~~l~~~~~~~~---~~~~g~-~~~~C~-----~-~~~P~i~f~f-~g~~~~l 316 (375)
T 1miq_A 255 ----EK---ANVIVDSGTTTITAPSEFLNKFFANLNVIK---VPFLPF-YVTTCD-----N-KEMPTLEFKS-ANNTYTL 316 (375)
T ss_dssp ----EE---EEEEECTTBSSEEECHHHHHHHHHHHTCEE---CTTSSC-EEEETT-----C-TTCCCEEEEC-SSCEEEE
T ss_pred ----cc---ceEEecCCCccEEcCHHHHHHHHHHhCCcc---cCCCCe-EEEECC-----C-CCCCcEEEEE-CCEEEEE
Confidence 11 459999999999999999999999997642 222222 233464 3 5689999999 7899999
Q ss_pred cCCCcEEEeC--CCeEEE-EEEeCCCCCCceeechhhhceeEEEEECCCCEEEEEeCC
Q 012892 398 DKTGIMYASN--ISQVCL-AFAGNSDPTDVSIFGNTQQHTLEVVYDVAGGKVGFAAGG 452 (454)
Q Consensus 398 ~~~~~~~~~~--~~~~C~-~~~~~~~~~~~~IlG~~fl~~~~vvfD~~~~rigfa~~~ 452 (454)
++++|+++.. .+..|+ +|.+.+...+.||||++|||++|+|||++++|||||+++
T Consensus 317 ~~~~yi~~~~~~g~~~C~~~~~~~~~~~~~~ILG~~fl~~~yvvfD~~~~riGfA~~~ 374 (375)
T 1miq_A 317 EPEYYMNPILEVDDTLCMITMLPVDIDSNTFILGDPFMRKYFTVFDYDKESVGFAIAK 374 (375)
T ss_dssp CGGGSEEESSSSSCSEEEESEEECCSSSSEEEECHHHHHHEEEEEETTTTEEEEEEEC
T ss_pred CHHHhEeeccCCCCCeEEEEEEECCCCCCcEEECHHHhccEEEEEECCCCEEEEEEcC
Confidence 9999999864 346899 888764323689999999999999999999999999864
No 20
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ...
Probab=100.00 E-value=1.9e-55 Score=435.57 Aligned_cols=296 Identities=22% Similarity=0.340 Sum_probs=241.5
Q ss_pred CcccEEEEEEeCCCCceEEEEEECCCceeeEeCCCccccccCCCCCCCCCCCCCccceecCCCccccccccCCCCCCCCC
Q 012892 109 GAGNYIVTVGIGTPKKDLSLIFDTGSDLTWTQCEPCVKYCYEQKEPKFDPTVSQSYSNVSCSSTICTSLQSATGNSPACA 188 (454)
Q Consensus 109 ~~~~Y~~~i~iGtP~q~~~li~DTGS~~~Wv~~~~C~~~C~~~~~~~f~ps~SsT~~~~~C~~~~C~~~~~~~~~~~~c~ 188 (454)
.+.+|+++|.||||||++.|++||||+++||+|.+|.. |.. .++.|||++|+||+.++
T Consensus 13 ~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~~-~~~-~~~~y~~~~SsT~~~~~-------------------- 70 (329)
T 1oew_A 13 LDDAYITPVQIGTPAQTLNLDFDTGSSDLWVFSSETTA-SEV-XQTIYTPSKSTTAKLLS-------------------- 70 (329)
T ss_dssp TCCCEEEEEEETTTTEEEEEEEETTCCCEEECBTTSCG-GGC--CCCBCGGGCTTCEEEE--------------------
T ss_pred CCCEEEEEEEECCCCeEEEEEECCCCCCeEEecCCCCc-ccc-ccCccCCccCccceecC--------------------
Confidence 56889999999999999999999999999999999954 654 45899999999999874
Q ss_pred CCCceeeeEeCCCCeEEEeEEEEEEEeCCCccccceeeeeeecCCCCC---CCcceeeecCCCCCccc---------eeh
Q 012892 189 SSTCLYGIQYGDSSFSIGFFGKETLTLTPRDVFPNFLFGCGQNNRGLF---GGAAGLMGLGRDPISLV---------SQT 256 (454)
Q Consensus 189 ~~~c~~~~~Ygdgs~~~G~~~~Dtv~~~~~~~~~~~~FG~~~~~~~~~---~~~~GilGLg~~~~sl~---------~q~ 256 (454)
.|.|.+.|++|+.+.|.+++|+|+|++ ..++++.|||++...+.+ ...+||||||++.++.+ +|+
T Consensus 71 --~~~~~i~Yg~Gs~~~G~~~~D~v~~g~-~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~~~~l 147 (329)
T 1oew_A 71 --GATWSISYGDGSSSSGDVYTDTVSVGG-LTVTGQAVESAKKVSSSFTEDSTIDGLLGLAFSTLNTVSPTQQKTFFDNA 147 (329)
T ss_dssp --EEEEEEECTTSCEEEEEEEEEEEEETT-EEEEEEEEEEEEEECHHHHHCTTCCEEEECSCGGGCCCBSSCCCCHHHHH
T ss_pred --CCeEEEEeCCCCcEEEEEEEEEEEECC-EEEeeeEEEEEEecCccccccCCCceEEEeccccccccCcCCCCCHHHHH
Confidence 268999999998889999999999998 689999999999876533 36899999999877653 233
Q ss_pred hhhc-CCcEEEecCCCCCCCceEEeccCCC----CCeeeEecccCCCCCccEEEEEeEEEECcEEeeeccccccCCCEEE
Q 012892 257 ATKY-KKLFSYCLPSSASSTGHLTFGPGAS----KSVQFTPLSSISGGSSFYGLEMIGISVGGQKLSIAASVFTTAGTII 331 (454)
Q Consensus 257 ~~~~-~~~FS~~L~~~~~~~G~l~fGg~d~----~~~~~~pl~~~~~~~~~y~v~l~~i~vg~~~~~~~~~~~~~~~~ii 331 (454)
..+. +++||+||.+. ..|.|+|||+|+ +++.|+|+.. .+.+|.|.|++|+|+++.+.. .. ..+||
T Consensus 148 ~~~i~~~~FS~~L~~~--~~G~l~fGg~d~~~~~g~l~~~p~~~---~~~~~~v~l~~i~v~~~~~~~--~~---~~aii 217 (329)
T 1oew_A 148 KASLDSPVFTADLGYH--APGTYNFGFIDTTAYTGSITYTAVST---KQGFWEWTSTGYAVGSGTFKS--TS---IDGIA 217 (329)
T ss_dssp TTTSSSSEEEEECCSS--SCEEEEESCCCTTSSSSCCEEEECBC---TTSSCEEEEEEEEETTSCCEE--EE---EEEEE
T ss_pred HHhccCcEEEEEccCC--CCeEEEEeccChHhcccceEEEEccC---CCceEEEEEeeEEECCeeccC--CC---ceEEE
Confidence 3322 68999999873 479999999884 6899999985 257899999999999986642 11 35999
Q ss_pred cccccCccCCHhHHHHHHHHHHHhhhcCCCCCCCccccccccccCCcccccCeEEEEEcCCcEEEEcCCCcEEEeC--CC
Q 012892 332 DSGTVITRLPPDAYTPLRTAFRQFMSKYPTAPALSLLDTCYDFSKYSTVTLPQISLFFSGGVEVSVDKTGIMYASN--IS 409 (454)
Q Consensus 332 DSGT~~~~lp~~~~~~l~~~l~~~~~~~~~~~~~~~~~~Cy~~~~~~~~~~P~i~~~f~gg~~~~l~~~~~~~~~~--~~ 409 (454)
||||++++||++++++|.+++.++. +....+. ...+|+ ..+|+|+|+| ||++++||+++|+++.. ..
T Consensus 218 DSGTt~~~lP~~~~~~l~~~i~~a~--~~~~~g~-~~~~C~-------~~~P~i~f~f-gg~~~~ip~~~~~~~~~~~~~ 286 (329)
T 1oew_A 218 DTGTTLLYLPATVVSAYWAQVSGAK--SSSSVGG-YVFPCS-------ATLPSFTFGV-GSARIVIPGDYIDFGPISTGS 286 (329)
T ss_dssp CTTCCSEEECHHHHHHHHTTSTTCE--EETTTTE-EEEETT-------CCCCCEEEEE-TTEEEEECHHHHEEEESSTTC
T ss_pred eCCCCCEECCHHHHHHHHHhCCCcE--EcCCCCE-EEEECC-------CCCCcEEEEE-CCEEEEECHHHeeeeecCCCC
Confidence 9999999999999999998874331 1111111 112353 3689999999 89999999999998753 24
Q ss_pred eEEEE-EEeCCCCCCceeechhhhceeEEEEEC-CCCEEEEEeC
Q 012892 410 QVCLA-FAGNSDPTDVSIFGNTQQHTLEVVYDV-AGGKVGFAAG 451 (454)
Q Consensus 410 ~~C~~-~~~~~~~~~~~IlG~~fl~~~~vvfD~-~~~rigfa~~ 451 (454)
..|++ +.+.+ ..+.||||+.|||++|+|||+ +++|||||+.
T Consensus 287 ~~C~~~i~~~~-~~~~~iLG~~fl~~~y~vfD~~~~~riGfA~~ 329 (329)
T 1oew_A 287 SSCFGGIQSSA-GIGINIFGDVALKAAFVVFNGATTPTLGFASK 329 (329)
T ss_dssp SEEEESEEEST-TTSSEEECHHHHTTEEEEEECSSSCEEEEEEC
T ss_pred CeEEEEEEeCC-CCCceEEChHHhcCEEEEEECCCCceEEEecC
Confidence 78995 66543 346899999999999999999 9999999984
No 21
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A
Probab=100.00 E-value=3.5e-55 Score=432.94 Aligned_cols=296 Identities=24% Similarity=0.393 Sum_probs=242.9
Q ss_pred ccCcccEEEEEEeCCCCceEEEEEECCCceeeEeCCCccccccCCCCCCCCCCCCCccceecCCCccccccccCCCCCCC
Q 012892 107 VVGAGNYIVTVGIGTPKKDLSLIFDTGSDLTWTQCEPCVKYCYEQKEPKFDPTVSQSYSNVSCSSTICTSLQSATGNSPA 186 (454)
Q Consensus 107 ~~~~~~Y~~~i~iGtP~q~~~li~DTGS~~~Wv~~~~C~~~C~~~~~~~f~ps~SsT~~~~~C~~~~C~~~~~~~~~~~~ 186 (454)
...+.+|+++|+||||||++.|++||||+++||+|.+|.. | .+.++.|||++|+||+...
T Consensus 11 ~~~~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c~~-c-~~~~~~y~~~~SsT~~~~~------------------ 70 (325)
T 2apr_A 11 YGNDIEYYGQVTIGTPGKKFNLDFDTGSSDLWIASTLCTN-C-GSGQTKYDPNQSSTYQADG------------------ 70 (325)
T ss_dssp ETTTTEEEEEEEETTTTEEEEEEEETTCCCCEEEBTTCSS-C-CTTSCCBCGGGCTTCEEEE------------------
T ss_pred cCCCCEEEEEEEECCCCeEEEEEEcCCCCCEEEccCCCch-H-hcCCCCCCcccCCCeeeCC------------------
Confidence 3557899999999999999999999999999999999965 7 5556899999999998853
Q ss_pred CCCCCceeeeEeCCCCeEEEeEEEEEEEeCCCccccceeeeeeecCCCCCC--CcceeeecCCCCCcc-------ceehh
Q 012892 187 CASSTCLYGIQYGDSSFSIGFFGKETLTLTPRDVFPNFLFGCGQNNRGLFG--GAAGLMGLGRDPISL-------VSQTA 257 (454)
Q Consensus 187 c~~~~c~~~~~Ygdgs~~~G~~~~Dtv~~~~~~~~~~~~FG~~~~~~~~~~--~~~GilGLg~~~~sl-------~~q~~ 257 (454)
|.|.+.|++|+.+.|.+++|+|+|++ ..++++.|||++...+.|. ..+||||||+..++. ++|+.
T Consensus 71 -----~~~~i~Yg~Gs~~~G~~~~D~v~~g~-~~v~~~~fg~~~~~~~~f~~~~~~GilGLg~~~~s~~~~~~~~~~~l~ 144 (325)
T 2apr_A 71 -----RTWSISYGDGSSASGILAKDNVNLGG-LLIKGQTIELAKREAASFASGPNDGLLGLGFDTITTVRGVKTPMDNLI 144 (325)
T ss_dssp -----EEEEEECTTSCEEEEEEEEEEEEETT-EEEEEEEEEEEEEECHHHHTSSCSEEEECSCGGGCSSTTCCCHHHHHH
T ss_pred -----CEEEEEECCCCCEEEEEEEEEEEECC-EEECcEEEEEEeccCcccccCCCceEEEeCCcccccccCCCCHHHHHH
Confidence 69999999998899999999999998 6899999999998765332 489999999987653 34554
Q ss_pred hh--c-CCcEEEecCCC-CCCCceEEeccCCC----CCeeeEecccCCCCCccEEEEEeEEEECcEEeeeccccccCCCE
Q 012892 258 TK--Y-KKLFSYCLPSS-ASSTGHLTFGPGAS----KSVQFTPLSSISGGSSFYGLEMIGISVGGQKLSIAASVFTTAGT 329 (454)
Q Consensus 258 ~~--~-~~~FS~~L~~~-~~~~G~l~fGg~d~----~~~~~~pl~~~~~~~~~y~v~l~~i~vg~~~~~~~~~~~~~~~~ 329 (454)
.+ . +++||+||.+. ....|.|+|||+|+ +++.|+|+.. .+.+|.|.+++|+|++ .+. ... ..+
T Consensus 145 ~qg~i~~~~FS~~l~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~---~~~~~~v~l~~i~vg~-~~~--~~~---~~~ 215 (325)
T 2apr_A 145 SQGLISRPIFGVYLGKAKNGGGGEYIFGGYDSTKFKGSLTTVPIDN---SRGWWGITVDRATVGT-STV--ASS---FDG 215 (325)
T ss_dssp HTTSCSSSEEEEEECCGGGTCCEEEEETCCCGGGBCSCCEEEECBC---TTSSCEEEECEEEETT-EEE--ECC---EEE
T ss_pred hcCCCCCceEEEEecCCCCCCCCEEEEccCCchhccCceEEEEccC---CCCEEEEEEeEEEECC-Eec--CCC---ceE
Confidence 43 1 68999999763 23589999999884 6899999975 2578999999999999 332 222 359
Q ss_pred EEcccccCccCCHhHHHHHHHHHHHhhhcCCCCCCCccccccccccCCcccccCeEEEEEcCCcEEEEcCCCcEEEeCCC
Q 012892 330 IIDSGTVITRLPPDAYTPLRTAFRQFMSKYPTAPALSLLDTCYDFSKYSTVTLPQISLFFSGGVEVSVDKTGIMYASNIS 409 (454)
Q Consensus 330 iiDSGT~~~~lp~~~~~~l~~~l~~~~~~~~~~~~~~~~~~Cy~~~~~~~~~~P~i~~~f~gg~~~~l~~~~~~~~~~~~ 409 (454)
||||||++++||+++|+++.+++.+.+... +. |.++|.. ..+|+|+|+| +|.+++||+++|+++.. +
T Consensus 216 iiDSGTs~~~lP~~~~~~~~~~~~~~~~~~----g~------~~~~C~~-~~~p~i~f~f-~g~~~~ip~~~~~~~~~-~ 282 (325)
T 2apr_A 216 ILDTGTTLLILPNNIAASVARAYGASDNGD----GT------YTISCDT-SAFKPLVFSI-NGASFQVSPDSLVFEEF-Q 282 (325)
T ss_dssp EECTTCSSEEEEHHHHHHHHHHHTCEECSS----SC------EEECSCG-GGCCCEEEEE-TTEEEEECGGGGEEEEE-T
T ss_pred EEecCCccEECCHHHHHHHHHHHhcccCCC----Ce------EEEECCC-CCCCcEEEEE-CCEEEEECHHHEEEcCC-C
Confidence 999999999999999999999998764321 11 2333332 3489999999 56699999999998754 6
Q ss_pred eEEEE-EEeCCCCCCceeechhhhceeEEEEECCCCEEEEEeCC
Q 012892 410 QVCLA-FAGNSDPTDVSIFGNTQQHTLEVVYDVAGGKVGFAAGG 452 (454)
Q Consensus 410 ~~C~~-~~~~~~~~~~~IlG~~fl~~~~vvfD~~~~rigfa~~~ 452 (454)
..|++ +...+ .+.||||+.|||++|+|||++++|||||+++
T Consensus 283 ~~C~~~i~~~~--~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 324 (325)
T 2apr_A 283 GQCIAGFGYGN--WGFAIIGDTFLKNNYVVFNQGVPEVQIAPVA 324 (325)
T ss_dssp TEEEESEEEES--SSSEEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred CeEEEEEEcCC--CCCEEECHHHhcceEEEEECCCCEEEEEecC
Confidence 78995 55442 4579999999999999999999999999874
No 22
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} SCOP: b.50.1.2 PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A*
Probab=100.00 E-value=3.2e-55 Score=436.39 Aligned_cols=301 Identities=22% Similarity=0.358 Sum_probs=246.1
Q ss_pred ceeccccCCccCcccEEEEEEeCCCCceEEEEEECCCceeeEeCCC--cc--------ccccCCCCCCCCCCCCCcccee
Q 012892 98 ATLPAKDGSVVGAGNYIVTVGIGTPKKDLSLIFDTGSDLTWTQCEP--CV--------KYCYEQKEPKFDPTVSQSYSNV 167 (454)
Q Consensus 98 ~~~p~~~~~~~~~~~Y~~~i~iGtP~q~~~li~DTGS~~~Wv~~~~--C~--------~~C~~~~~~~f~ps~SsT~~~~ 167 (454)
+.+|+.+. +++|+++|+||||||++.|++||||+++||+|.. |. ..|..+ +.|||++|+|++..
T Consensus 3 v~~~l~~~----~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C~~~--~~y~~~~SsT~~~~ 76 (342)
T 3pvk_A 3 VPVTLHNE----QVTYAADITVGSNNQKLNVIVDTGSSDLWVPDVNVDCQVTYSDQTADFCKQK--GTYDPSGSSASQDL 76 (342)
T ss_dssp EEEEEEEC----SSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSTTCCTTGGGTT--CCBCGGGCTTCEEE
T ss_pred cceEEecC----CcEEEEEEEEcCCCcEEEEEEECCCcceEEEcCCCCCcccccccccCCCCCC--CcCCCccCcceeec
Confidence 45666543 6889999999999999999999999999998653 52 357654 89999999999997
Q ss_pred cCCCccccccccCCCCCCCCCCCCceeeeEeCCCCeEEEeEEEEEEEeCCCccccceeeeeeecCCCCCCCcceeeecCC
Q 012892 168 SCSSTICTSLQSATGNSPACASSTCLYGIQYGDSSFSIGFFGKETLTLTPRDVFPNFLFGCGQNNRGLFGGAAGLMGLGR 247 (454)
Q Consensus 168 ~C~~~~C~~~~~~~~~~~~c~~~~c~~~~~Ygdgs~~~G~~~~Dtv~~~~~~~~~~~~FG~~~~~~~~~~~~~GilGLg~ 247 (454)
. |.|.+.|++|+.+.|.+++|+|+|++ ..++++.|||++... ..+||||||+
T Consensus 77 ~-----------------------~~~~i~Yg~gs~~~G~~~~D~v~ig~-~~v~~~~fg~~~~~~----~~~GilGLg~ 128 (342)
T 3pvk_A 77 N-----------------------TPFKIGYGDGSSSQGTLYKDTVGFGG-VSIKNQVLADVDSTS----IDQGILGVGY 128 (342)
T ss_dssp E-----------------------EEEEEECSSSCEEEEEEEEEEEEETT-EEEEEEEEEEEEEES----SSSCEEECSC
T ss_pred C-----------------------CeEEEEecCCCeEEEEEEEEEEEECC-EEecceEEEEEEccC----CCccEEEecC
Confidence 5 69999999998899999999999998 799999999999865 4899999999
Q ss_pred CCC-------ccceehhhhc---CCcEEEecCCCCCCCceEEeccCCC----CCeeeEecccCCCCCccEEEEEeEEEEC
Q 012892 248 DPI-------SLVSQTATKY---KKLFSYCLPSSASSTGHLTFGPGAS----KSVQFTPLSSISGGSSFYGLEMIGISVG 313 (454)
Q Consensus 248 ~~~-------sl~~q~~~~~---~~~FS~~L~~~~~~~G~l~fGg~d~----~~~~~~pl~~~~~~~~~y~v~l~~i~vg 313 (454)
+.+ +++.|+..+. ++.||+||.+.....|.|+|||+|+ +++.|+|+.. ..+|.|++++|+|+
T Consensus 129 ~~~~~~~~~~~~~~~L~~qg~i~~~~fs~~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~----~~~~~v~l~~i~v~ 204 (342)
T 3pvk_A 129 KTNEAGGSYDNVPVTLKKQGVIAKNAYSLYLNSPDAATGQIIFGGVDNAKYSGSLIALPVTS----DRELRISLGSVEVS 204 (342)
T ss_dssp GGGCSSCSSCCHHHHHHHTTSSSSSEEEEECCCTTCSEEEEEETEEETTSBSSCCEEEECCC----SSSCEEEEEEEEET
T ss_pred ccccccccCCcHHHHHHhcCCCCCceEEEEeCCCCCCCcEEEECccCccceeeeeEEeecCc----cceEEEEEeEEEEC
Confidence 874 4556665542 6899999988665689999999874 6899999987 56899999999999
Q ss_pred cEEeeeccccccCCCEEEcccccCccCCHhHHHHHHHHHHHhhhcCCCCCCCccccccccccCCcccccCeEEEEEcCCc
Q 012892 314 GQKLSIAASVFTTAGTIIDSGTVITRLPPDAYTPLRTAFRQFMSKYPTAPALSLLDTCYDFSKYSTVTLPQISLFFSGGV 393 (454)
Q Consensus 314 ~~~~~~~~~~~~~~~~iiDSGT~~~~lp~~~~~~l~~~l~~~~~~~~~~~~~~~~~~Cy~~~~~~~~~~P~i~~~f~gg~ 393 (454)
++.+..+. ..+||||||++++||++++++|.+++++...... .+. .+|.++|. ..|+|+|+|.+|.
T Consensus 205 g~~~~~~~-----~~~iiDSGtt~~~lP~~~~~~i~~~~~~~~~~~~--~~~----~~~~~~C~---~~p~i~f~f~~g~ 270 (342)
T 3pvk_A 205 GKTINTDN-----VDVLLDSGTTITYLQQDLADQIIKAFNGKLTQDS--NGN----SFYEVDCN---LSGDVVFNFSKNA 270 (342)
T ss_dssp TEEEEEEE-----EEEEECTTCSSEEECHHHHHHHHHHTTCEEEECT--TSC----EEEEECSC---CCSEEEEEESTTC
T ss_pred CEEecCCC-----ceEEEeCCCCCeecCHHHHHHHHHHcCCeecccC--CCc----eEEEEecC---CCCceEEEECCCC
Confidence 99987542 2499999999999999999999999987643111 111 12334443 3599999996589
Q ss_pred EEEEcCCCcEEEeC--CC---eEEE-EEEeCCCCCCceeechhhhceeEEEEECCCCEEEEEeCCCC
Q 012892 394 EVSVDKTGIMYASN--IS---QVCL-AFAGNSDPTDVSIFGNTQQHTLEVVYDVAGGKVGFAAGGCS 454 (454)
Q Consensus 394 ~~~l~~~~~~~~~~--~~---~~C~-~~~~~~~~~~~~IlG~~fl~~~~vvfD~~~~rigfa~~~C~ 454 (454)
+++||+++|+++.. .+ ..|+ ++.+. +.||||+.|||++|+|||++++|||||+++|+
T Consensus 271 ~~~vp~~~~~~~~~~~~g~~~~~C~~~i~~~----~~~ilG~~fl~~~y~vfD~~~~~igfA~~~~~ 333 (342)
T 3pvk_A 271 KISVPASEFAASLQGDDGQPYDKCQLLFDVN----DANILGDNFLRSAYIVYDLDDNEISLAQVKYT 333 (342)
T ss_dssp EEEEEGGGGEEC----------CEEESEEEC----TTCEECHHHHTTEEEEEETTTTEEEEEEBCCC
T ss_pred EEEEcHHHheeeccccCCCcCCeeEEEEeeC----CCeEeCHHHHhcEEEEEECCCCEEEEEecCCC
Confidence 99999999998731 22 6799 55542 46999999999999999999999999999995
No 23
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2
Probab=100.00 E-value=2.2e-54 Score=446.56 Aligned_cols=316 Identities=22% Similarity=0.417 Sum_probs=251.5
Q ss_pred ceeccccCCccCcccEEEEEEeCCCCceEEEEEECCCceeeEeCCCcc--ccccCCCCCCCCCCCCCccceecCCCcccc
Q 012892 98 ATLPAKDGSVVGAGNYIVTVGIGTPKKDLSLIFDTGSDLTWTQCEPCV--KYCYEQKEPKFDPTVSQSYSNVSCSSTICT 175 (454)
Q Consensus 98 ~~~p~~~~~~~~~~~Y~~~i~iGtP~q~~~li~DTGS~~~Wv~~~~C~--~~C~~~~~~~f~ps~SsT~~~~~C~~~~C~ 175 (454)
..+|+.+ +.+.+|+++|+||||||++.|++||||+++||+|..|. ..|..+ +.|||++|+||+...
T Consensus 42 ~~~~l~n---~~~~~Y~~~i~IGTP~Q~~~v~~DTGSs~lWV~~~~C~~~~~C~~~--~~y~~~~SsT~~~~~------- 109 (478)
T 1qdm_A 42 DIVALKN---YMNAQYFGEIGVGTPPQKFTVIFDTGSSNLWVPSAKCYFSIACYLH--SRYKAGASSTYKKNG------- 109 (478)
T ss_dssp CSGGGCC---GGGCCEEEEEEETTTTEEEEEEEETTCCCCEEEBTTCCSCGGGGGS--CCBCGGGCTTCBCCC-------
T ss_pred ceEEeEe---ccCCEEEEEEEECCCCeEEEEEEcCCCcceEEecCCCCCCccccCC--CCCCcccCCCeeeCC-------
Confidence 4577763 45789999999999999999999999999999999994 469876 899999999998753
Q ss_pred ccccCCCCCCCCCCCCceeeeEeCCCCeEEEeEEEEEEEeCCCccccceeeeeeecCCCC-C--CCcceeeecCCCCCcc
Q 012892 176 SLQSATGNSPACASSTCLYGIQYGDSSFSIGFFGKETLTLTPRDVFPNFLFGCGQNNRGL-F--GGAAGLMGLGRDPISL 252 (454)
Q Consensus 176 ~~~~~~~~~~~c~~~~c~~~~~Ygdgs~~~G~~~~Dtv~~~~~~~~~~~~FG~~~~~~~~-~--~~~~GilGLg~~~~sl 252 (454)
|.|.+.|++|+ +.|.+++|+|+|++ ..++++.|||++...+. | ...+||||||++.+++
T Consensus 110 ----------------~~~~i~Yg~Gs-~~G~~~~Dtv~ig~-~~v~~~~Fg~a~~~~~~~f~~~~~dGIlGLg~~~~s~ 171 (478)
T 1qdm_A 110 ----------------KPAAIQYGTGS-IAGYFSEDSVTVGD-LVVKDQEFIEATKEPGITFLVAKFDGILGLGFKEISV 171 (478)
T ss_dssp ----------------CEEEEEETTEE-EEEEEEEEEEEETT-EEEEEEEEEEEEECCBSHHHHCSSSEEEECSCGGGCG
T ss_pred ----------------cEEEEEcCCCC-eEEEEEEEEEEECC-eEECCEEEEEEEecCCcccccccccceeccccccccc
Confidence 68999999997 89999999999998 68999999999987652 2 3679999999998774
Q ss_pred ----------ceehhhhcCCcEEEecCCCC--CCCceEEeccCCC----CCeeeEecccCCCCCccEEEEEeEEEECcEE
Q 012892 253 ----------VSQTATKYKKLFSYCLPSSA--SSTGHLTFGPGAS----KSVQFTPLSSISGGSSFYGLEMIGISVGGQK 316 (454)
Q Consensus 253 ----------~~q~~~~~~~~FS~~L~~~~--~~~G~l~fGg~d~----~~~~~~pl~~~~~~~~~y~v~l~~i~vg~~~ 316 (454)
++|.... .++||+||.+.. ...|.|+|||+|+ +++.|+|+.. .++|.|.|++|+|+++.
T Consensus 172 ~~~~p~~~~l~~qg~i~-~~~FS~~L~~~~~~~~~G~l~fGg~d~~~~~G~l~~~pv~~----~~~w~v~l~~i~v~g~~ 246 (478)
T 1qdm_A 172 GKAVPVWYKMIEQGLVS-DPVFSFWLNRHVDEGEGGEIIFGGMDPKHYVGEHTYVPVTQ----KGYWQFDMGDVLVGGKS 246 (478)
T ss_dssp GGCCCHHHHHTTTTCCS-SSEEEEECCCC-----CEEEEETCCCTTSEEEEEEEEEEEE----ETTEEEEECCEEETTEE
T ss_pred CCCCcHHHHHHHCCCCC-CCEEEEEeecCCCCCCCeEEEeCCcCHhhcCCCceEEeccC----CCeEEEEEeEEEECCEE
Confidence 3333222 689999998863 3489999999985 5899999986 67999999999999998
Q ss_pred eeeccccccCCCEEEcccccCccCCHhHHHHHHHHHHHhh----------------------hcCCC-----------CC
Q 012892 317 LSIAASVFTTAGTIIDSGTVITRLPPDAYTPLRTAFRQFM----------------------SKYPT-----------AP 363 (454)
Q Consensus 317 ~~~~~~~~~~~~~iiDSGT~~~~lp~~~~~~l~~~l~~~~----------------------~~~~~-----------~~ 363 (454)
+.+.... .++||||||++++||+++|++|.+++++.. .+.+. ..
T Consensus 247 ~~~~~~~---~~aiiDTGTs~~~lP~~~~~~i~~~i~a~~~~s~~Ck~~v~~yg~~ii~~l~~~~~p~~vC~~iglC~~~ 323 (478)
T 1qdm_A 247 TGFCAGG---CAAIADSGTSLLAGPTAIITEINEKIGAAGVVSQECKTIVSQYGQQILDLLLAETQPKKICSQVGLCTFD 323 (478)
T ss_dssp CSTTTTC---EEEEECSSCCSEEECHHHHHHHHHHHTCCCBCCHHHHHHHHHTHHHHHHHHHTTCCHHHHHHHTTCC---
T ss_pred EeecCCC---ceEEEcCCCCceeCCHHHHHHHHHHhCccccccccccchhhhhhhHHHHhhhhccChhhhhccccccccC
Confidence 7654332 469999999999999999999999986531 00000 00
Q ss_pred C----------------------------------------------------Cccccccccc---------cCCccccc
Q 012892 364 A----------------------------------------------------LSLLDTCYDF---------SKYSTVTL 382 (454)
Q Consensus 364 ~----------------------------------------------------~~~~~~Cy~~---------~~~~~~~~ 382 (454)
+ ....+.|+.+ +|.....+
T Consensus 324 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~C~~Ce~~v~~~~~~l~~n~t~~~I~~~~~~~C~~~~~~~g~~~v~C~~~~~l 403 (478)
T 1qdm_A 324 GTRGVSAGIRSVVDDEPVKSNGLRADPMCSACEMAVVWMQNQLAQNKTQDLILDYVNQLCNRLPSPMGESAVDCGSLGSM 403 (478)
T ss_dssp ------------------------CHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHTTCBCCSSSCCEECGGGGTTC
T ss_pred ccccccccccccccccccccccccccccchHHHHHHHHHHHHHhccccHHHHHHHHHHHhhccCCCCCeEEeeccccccc
Confidence 0 0012344433 34444679
Q ss_pred CeEEEEEcCCcEEEEcCCCcEEEeCC--CeEEE-EEEeCC---CCCCceeechhhhceeEEEEECCCCEEEEEeCC
Q 012892 383 PQISLFFSGGVEVSVDKTGIMYASNI--SQVCL-AFAGNS---DPTDVSIFGNTQQHTLEVVYDVAGGKVGFAAGG 452 (454)
Q Consensus 383 P~i~~~f~gg~~~~l~~~~~~~~~~~--~~~C~-~~~~~~---~~~~~~IlG~~fl~~~~vvfD~~~~rigfa~~~ 452 (454)
|+|+|+| ||++++|+|++|+++... +..|+ +|...+ ..++.||||+.|||++|+|||++++|||||++.
T Consensus 404 P~i~f~~-gg~~~~l~p~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~~ILGd~fl~~~y~vfD~~~~rIGfA~a~ 478 (478)
T 1qdm_A 404 PDIEFTI-GGKKFALKPEEYILKVGEGAAAQCISGFTAMDIPPPRGPLWILGDVFMGPYHTVFDYGKLRIGFAKAA 478 (478)
T ss_dssp CCEEEEE-TTEEEEECHHHHEEECSCGGGCCEEESEEECCCCTTSCSEEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred ccEEEEE-CCEEEEEChHHhEEEccCCCCCeEEEEEEeccCCCCCCCcEEECHHHhccEEEEEECCCCEEEEEeCC
Confidence 9999999 789999999999998654 35899 476542 124689999999999999999999999999863
No 24
>3qvc_A Histo-aspartic protease; HAP, plasmepsin, zymogen, hydrolase; 2.10A {Plasmodium falciparum} PDB: 3qvi_A* 3fns_A 3fnt_A* 3fnu_A*
Probab=100.00 E-value=1.8e-54 Score=443.33 Aligned_cols=301 Identities=18% Similarity=0.296 Sum_probs=249.7
Q ss_pred cceeccccCCccCcccEEEEEEeCCCCceEEEEEECCCceeeEeCCCcc-ccccCCCCCCCCCCCCCccceecCCCcccc
Q 012892 97 DATLPAKDGSVVGAGNYIVTVGIGTPKKDLSLIFDTGSDLTWTQCEPCV-KYCYEQKEPKFDPTVSQSYSNVSCSSTICT 175 (454)
Q Consensus 97 ~~~~p~~~~~~~~~~~Y~~~i~iGtP~q~~~li~DTGS~~~Wv~~~~C~-~~C~~~~~~~f~ps~SsT~~~~~C~~~~C~ 175 (454)
...+|+. +..+.+|+++|+||||||++.|++||||+++||+|..|. ..|..+ +.|||++|+||+...
T Consensus 126 ~~~~pL~---n~~d~~Y~~~I~IGTPpQ~~~vi~DTGSs~lWV~s~~C~s~~C~~~--~~ydps~SsT~~~~~------- 193 (451)
T 3qvc_A 126 FDNVELK---DLANVLSFGEAKLGDNGQKFNFLFHTASSNVWVPSIKCTSESCESK--NHYDSSKSKTYEKDD------- 193 (451)
T ss_dssp -CCCCGG---GGBCEEEEEEEEETTTTEEEEEEEESSBCSEEEEBTTCCSGGGTTS--CCBCGGGCTTCEEEE-------
T ss_pred CCcccee---ecCCCEEEEEEEECCCCcEEEEEEcCCCccEEEecCCCCccccCCC--CCCCCCCCcccccCC-------
Confidence 4457776 345788999999999999999999999999999999993 469765 899999999999864
Q ss_pred ccccCCCCCCCCCCCCceeeeEeCCCCeEEEeEEEEEEEeCCCccccceeeeeeec----CCCCC--CCcceeeecCCCC
Q 012892 176 SLQSATGNSPACASSTCLYGIQYGDSSFSIGFFGKETLTLTPRDVFPNFLFGCGQN----NRGLF--GGAAGLMGLGRDP 249 (454)
Q Consensus 176 ~~~~~~~~~~~c~~~~c~~~~~Ygdgs~~~G~~~~Dtv~~~~~~~~~~~~FG~~~~----~~~~~--~~~~GilGLg~~~ 249 (454)
|.|.+.|++|+ +.|.+++|+|+|++ ..++ +.|||++. ..+ + ...+||||||++.
T Consensus 194 ----------------~~f~i~YgdGs-~~G~~~~Dtv~igg-~~v~-~~Fg~a~~t~~~~~~-f~~~~~dGILGLg~~~ 253 (451)
T 3qvc_A 194 ----------------TPVKLTSKAGT-ISGIFSKDLVTIGK-LSVP-YKFIEMTEIVGFEPF-YSESDVDGVFGLGWKD 253 (451)
T ss_dssp ----------------EEEEEECSSEE-EEEEEEEEEEEETT-EEEE-EEEEEEEEEEECTTH-HHHSCCCEEEECSSBC
T ss_pred ----------------CEEEEEECCCE-EEEEEEEEEEEECC-EEEE-EEEEEEEeccccCCC-ccCCCCCEEEecCCCc
Confidence 69999999998 99999999999998 6888 99999998 555 3 2579999999987
Q ss_pred Cc------cceehhhh---cCCcEEEecCCCCCCCceEEeccCCC----CCeeeEecccCCCCCccEEEEEeEEEECcEE
Q 012892 250 IS------LVSQTATK---YKKLFSYCLPSSASSTGHLTFGPGAS----KSVQFTPLSSISGGSSFYGLEMIGISVGGQK 316 (454)
Q Consensus 250 ~s------l~~q~~~~---~~~~FS~~L~~~~~~~G~l~fGg~d~----~~~~~~pl~~~~~~~~~y~v~l~~i~vg~~~ 316 (454)
++ ++.++..+ .++.||+||.+.....|.|+|||+|+ +++.|+|+.. +.+|.|.++ |+|+++
T Consensus 254 ~s~~~~~~~~~~L~~qg~I~~~~FS~~L~~~~~~~G~l~fGgiD~s~y~G~l~~~pv~~----~~~w~v~l~-I~Vgg~- 327 (451)
T 3qvc_A 254 LSIGSIDPYIVELKTQNKIEQAVYSIYLPPENKNKGYLTIGGIEERFFDGPLNYEKLNH----DLMWQVDLD-VHFGNV- 327 (451)
T ss_dssp SSSSCCCCHHHHHHHTTSSSSSEEEEECCTTCTTEEEEEESSCCGGGEEEEEEEEECSS----TTSSEEEEE-EEETTE-
T ss_pred ccccCCCCHHHHHHHcCCCCCCEEEEEEcCCCCCCCEEEECCcchhhcCCceEEEEccc----CCeeEEEEE-EEECCc-
Confidence 65 33444443 16899999998866689999999985 6899999986 689999999 999998
Q ss_pred eeeccccccCCCEEEcccccCccCCHhHHHHHHHHHHHhhhcCCCCCCCccccccccccCCcccccCeEEEEEcCCcEEE
Q 012892 317 LSIAASVFTTAGTIIDSGTVITRLPPDAYTPLRTAFRQFMSKYPTAPALSLLDTCYDFSKYSTVTLPQISLFFSGGVEVS 396 (454)
Q Consensus 317 ~~~~~~~~~~~~~iiDSGT~~~~lp~~~~~~l~~~l~~~~~~~~~~~~~~~~~~Cy~~~~~~~~~~P~i~~~f~gg~~~~ 396 (454)
.. . . ..+||||||++++||++++++|.+++++.. .... .+|.++|. ...+|+|+|+| ||.+++
T Consensus 328 ~~-~--~---~~aiiDSGTt~i~lP~~~~~~i~~~i~a~~---~~~~------g~y~v~C~-~~~~P~itf~f-gg~~i~ 390 (451)
T 3qvc_A 328 SS-K--K---ANVILDSATSVITVPTEFFNQFVESASVFK---VPFL------SLYVTTCG-NTKLPTLEYRS-PNKVYT 390 (451)
T ss_dssp EE-E--E---EEEEECTTBSSEEECHHHHHHHHTTTTCEE---CTTS------SCEEEETT-CTTCCCEEEEE-TTEEEE
T ss_pred cC-C--C---ceEEEeCCCccccCCHHHHHHHHHHcCCee---cCCC------CeEEeeCC-cCcCCcEEEEE-CCEEEE
Confidence 11 1 1 359999999999999999999999987652 1111 13555565 56789999999 789999
Q ss_pred EcCCCcEEEeC--CCeEEE-EEEeCCCCCCceeechhhhceeEEEEECCCCEEEEEeCC
Q 012892 397 VDKTGIMYASN--ISQVCL-AFAGNSDPTDVSIFGNTQQHTLEVVYDVAGGKVGFAAGG 452 (454)
Q Consensus 397 l~~~~~~~~~~--~~~~C~-~~~~~~~~~~~~IlG~~fl~~~~vvfD~~~~rigfa~~~ 452 (454)
||+++|+++.. .+..|+ ++.+.+...+.||||++|||++|+|||++++|||||+++
T Consensus 391 lp~~~yi~~~~~~~~~~C~~~i~~~~~~~~~~ILG~~FLr~~YvVfD~~n~rIGfA~ak 449 (451)
T 3qvc_A 391 LEPKQYLEPLENIFSALCMLNIVPIDLEKNTFVLGDPFMRKYFTVYDYDNHTVGFALAK 449 (451)
T ss_dssp ECHHHHEEECTTTSTTEEEECEEECCCSTTEEEECHHHHHHEEEEEETTTTEEEEEEEC
T ss_pred EcHHHheeecccCCCCeEEEEEEeCCCCCCCEEECHHHhhcEEEEEECCCCEEEEEEcc
Confidence 99999999864 357899 677654225689999999999999999999999999974
No 25
>2ewy_A Beta-secretase 2; BACE2, aspartic protease, hydrolase; HET: DBO; 3.10A {Homo sapiens}
Probab=100.00 E-value=3e-54 Score=435.85 Aligned_cols=307 Identities=22% Similarity=0.379 Sum_probs=244.6
Q ss_pred cccEEEEEEeCCCCceEEEEEECCCceeeEeCCCccccccCCCCCCCCCCCCCccceecCCCccccccccCCCCCCCCCC
Q 012892 110 AGNYIVTVGIGTPKKDLSLIFDTGSDLTWTQCEPCVKYCYEQKEPKFDPTVSQSYSNVSCSSTICTSLQSATGNSPACAS 189 (454)
Q Consensus 110 ~~~Y~~~i~iGtP~q~~~li~DTGS~~~Wv~~~~C~~~C~~~~~~~f~ps~SsT~~~~~C~~~~C~~~~~~~~~~~~c~~ 189 (454)
+..|+++|+||||||++.|++||||+++||+|.+|.. |+ +.|||++|+||+...
T Consensus 12 ~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c~~-~~----~~f~~~~SsT~~~~~--------------------- 65 (383)
T 2ewy_A 12 GRGYYLEMLIGTPPQKLQILVDTGSSNFAVAGTPHSY-ID----TYFDTERSSTYRSKG--------------------- 65 (383)
T ss_dssp TTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCBTT-BS----CCCCGGGCTTCEEEE---------------------
T ss_pred CCcEEEEEEecCCCceEEEEEecCCCceEEecCCCCc-cc----cCcccccCccceeCC---------------------
Confidence 4679999999999999999999999999999999853 53 789999999999875
Q ss_pred CCceeeeEeCCCCeEEEeEEEEEEEeCCCcccc-ceeeeeeecCCCCC---CCcceeeecCCCCCc------------cc
Q 012892 190 STCLYGIQYGDSSFSIGFFGKETLTLTPRDVFP-NFLFGCGQNNRGLF---GGAAGLMGLGRDPIS------------LV 253 (454)
Q Consensus 190 ~~c~~~~~Ygdgs~~~G~~~~Dtv~~~~~~~~~-~~~FG~~~~~~~~~---~~~~GilGLg~~~~s------------l~ 253 (454)
|.|.+.|++|+ +.|.+++|+|+|++..... .+.|++..+..+.+ ...+||||||++.++ |+
T Consensus 66 --~~~~i~Yg~Gs-~~G~~~~Dtv~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~dGilGLg~~~~s~~~~~~~~~~~~l~ 142 (383)
T 2ewy_A 66 --FDVTVKYTQGS-WTGFVGEDLVTIPKGFNTSFLVNIATIFESENFFLPGIKWNGILGLAYATLAKPSSSLETFFDSLV 142 (383)
T ss_dssp --EEEEEECSSCE-EEEEEEEEEEEETTTEEEEEEEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTTSCCHHHHHH
T ss_pred --ceEEEEECCcE-EEEEEEEEEEEECCCccceeEEEEEEEEeecceeeccCcCceEEecCchhcccccccccCHHHHHH
Confidence 68999999997 6899999999998632222 36788877665544 257999999998764 34
Q ss_pred eehhhhcCCcEEEecCCC-------CCCCceEEeccCCC----CCeeeEecccCCCCCccEEEEEeEEEECcEEeeeccc
Q 012892 254 SQTATKYKKLFSYCLPSS-------ASSTGHLTFGPGAS----KSVQFTPLSSISGGSSFYGLEMIGISVGGQKLSIAAS 322 (454)
Q Consensus 254 ~q~~~~~~~~FS~~L~~~-------~~~~G~l~fGg~d~----~~~~~~pl~~~~~~~~~y~v~l~~i~vg~~~~~~~~~ 322 (454)
+|... +++||+||.+. ....|.|+|||+|+ +++.|+|+.. ..+|.|.|++|+|+++.+.++..
T Consensus 143 ~q~~i--~~~FS~~l~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~----~~~~~v~l~~i~v~g~~~~~~~~ 216 (383)
T 2ewy_A 143 TQANI--PNVFSMQMCGAGLPVAGSGTNGGSLVLGGIEPSLYKGDIWYTPIKE----EWYYQIEILKLEIGGQSLNLDCR 216 (383)
T ss_dssp HHHTC--CSCEEEEECCC---------CCEEEEETSCCGGGCCSCEEEEECSS----BTTBBCCEEEEEETTEECCCCTT
T ss_pred HccCC--CcceEEEeeccccccccCCCCCeEEEeCccchhhccCccEEEecCC----CceEEEEEEEEEECCEEcccccc
Confidence 45443 58999999641 23589999999884 7899999987 57999999999999999877655
Q ss_pred cccCCCEEEcccccCccCCHhHHHHHHHHHHHhhhcCCCCCC--CccccccccccCCcccccCeEEEEEcCC-----cEE
Q 012892 323 VFTTAGTIIDSGTVITRLPPDAYTPLRTAFRQFMSKYPTAPA--LSLLDTCYDFSKYSTVTLPQISLFFSGG-----VEV 395 (454)
Q Consensus 323 ~~~~~~~iiDSGT~~~~lp~~~~~~l~~~l~~~~~~~~~~~~--~~~~~~Cy~~~~~~~~~~P~i~~~f~gg-----~~~ 395 (454)
.+....+||||||++++||+++|++|++++.+.........+ ......|+.........+|+|+|+|.|+ .++
T Consensus 217 ~~~~~~aiiDSGTt~~~lP~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~f~f~g~~~~~~~~~ 296 (383)
T 2ewy_A 217 EYNADKAIVDSGTTLLRLPQKVFDAVVEAVARASLIPEFSDGFWTGSQLACWTNSETPWSYFPKISIYLRDENSSRSFRI 296 (383)
T ss_dssp TTTSSCEEECTTCSSEEEEHHHHHHHHHHHHHTTCSSCCCHHHHHTSEEEEECSSSCGGGGSCCEEEEEECSSTTEEEEE
T ss_pred ccCCccEEEEcCCccccCCHHHHHHHHHHHhhhcccccCccccccccccccccCCcccHhhCCcEEEEECCCCCCceEEE
Confidence 554467999999999999999999999999987431111111 0123568876543335689999999654 379
Q ss_pred EEcCCCcEEEeC---CCeEEEEE--EeCCCCCCceeechhhhceeEEEEECCCCEEEEEeCCCC
Q 012892 396 SVDKTGIMYASN---ISQVCLAF--AGNSDPTDVSIFGNTQQHTLEVVYDVAGGKVGFAAGGCS 454 (454)
Q Consensus 396 ~l~~~~~~~~~~---~~~~C~~~--~~~~~~~~~~IlG~~fl~~~~vvfD~~~~rigfa~~~C~ 454 (454)
+|++++|+.+.. .+..|+++ .+. .+.||||+.|||++|+|||++++|||||+++|.
T Consensus 297 ~l~~~~yi~~~~~~~~~~~C~~~~i~~~---~~~~ILG~~fl~~~yvvfD~~~~rIGfA~~~c~ 357 (383)
T 2ewy_A 297 TILPQLYIQPMMGAGLNYECYRFGISPS---TNALVIGATVMEGFYVIFDRAQKRVGFAASPCA 357 (383)
T ss_dssp EECHHHHEEEECCCTTCSEEEEESEEEE---SSCEEECHHHHTTEEEEEETTTTEEEEEECTTC
T ss_pred EEChHHheeecccCCCCceeEEEEecCC---CCcEEEChHHhCCeeEEEECCCCeEEEEeccCC
Confidence 999999998863 35689864 332 346999999999999999999999999999994
No 26
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A*
Probab=100.00 E-value=4.9e-54 Score=425.50 Aligned_cols=303 Identities=14% Similarity=0.207 Sum_probs=246.9
Q ss_pred ceeccccCCccCcccEEEEEEeCCCCceEEEEEECCCceeeEeCCCcc-ccccCCCCCCCCCCCCCccceecCCCccccc
Q 012892 98 ATLPAKDGSVVGAGNYIVTVGIGTPKKDLSLIFDTGSDLTWTQCEPCV-KYCYEQKEPKFDPTVSQSYSNVSCSSTICTS 176 (454)
Q Consensus 98 ~~~p~~~~~~~~~~~Y~~~i~iGtP~q~~~li~DTGS~~~Wv~~~~C~-~~C~~~~~~~f~ps~SsT~~~~~C~~~~C~~ 176 (454)
+..|+. +..+..|+++|+|| ||++.|++||||+++||+|.+|. ..|..+.++.|||++| ||+...
T Consensus 7 ~~~~l~---n~~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~~C~~~~C~~~~~~~y~~~~S-T~~~~~-------- 72 (330)
T 1yg9_A 7 LYKLVH---VFINTQYAGITKIG--NQNFLTVFDSTSCNVVVASQECVGGACVCPNLQKYEKLKP-KYISDG-------- 72 (330)
T ss_dssp SCSCEE---EEECTTSEEEEEET--TEEEEEEEETTCCCEEEECTTCCSGGGGSTTCCCCCCSSC-EEEEEE--------
T ss_pred eEeeee---cCCCCEEEEEEEEC--CEEEEEEEeCCCcceEEecCCCCCccCcccccCccCCCCC-ceEECC--------
Confidence 345665 34568999999999 89999999999999999999995 3694334489999999 998864
Q ss_pred cccCCCCCCCCCCCCceeeeEeCCCCeEEEeEEEEEEEeCCCccccceeeeeeecCCCCC--CCcceeeecCCCCCc---
Q 012892 177 LQSATGNSPACASSTCLYGIQYGDSSFSIGFFGKETLTLTPRDVFPNFLFGCGQNNRGLF--GGAAGLMGLGRDPIS--- 251 (454)
Q Consensus 177 ~~~~~~~~~~c~~~~c~~~~~Ygdgs~~~G~~~~Dtv~~~~~~~~~~~~FG~~~~~~~~~--~~~~GilGLg~~~~s--- 251 (454)
|.|.+.|++|+ +.|.+++|+|+|++ ..++++.|||++.....| ...+||||||++.++
T Consensus 73 ---------------~~~~i~Yg~Gs-~~G~~~~Dtv~ig~-~~~~~~~fg~~~~~~~~f~~~~~~GilGLg~~~~s~~~ 135 (330)
T 1yg9_A 73 ---------------NVQVKFFDTGS-AVGRGIEDSLTISQ-LTTSQQDIVLADELSQEVCILSADVVVGIAAPGCPNAL 135 (330)
T ss_dssp ---------------EEEEEETTTEE-EEEEEEEEEEEETT-EEEEEEEEEEEEEECTHHHHTTCSEEEECSCTTSCCTT
T ss_pred ---------------CEEEEEECCce-EEEEEEEEEEEECC-EEEcCeEEEEEEEcccccccccCceEEEcCcchhcccc
Confidence 68999999997 59999999999998 689999999999873323 268999999999877
Q ss_pred ----cceehhhh--cCCcEEEecCCCCCC--CceEEeccCCC----CCeeeEecccCCCCCccEEEEEeEEEECcEEeee
Q 012892 252 ----LVSQTATK--YKKLFSYCLPSSASS--TGHLTFGPGAS----KSVQFTPLSSISGGSSFYGLEMIGISVGGQKLSI 319 (454)
Q Consensus 252 ----l~~q~~~~--~~~~FS~~L~~~~~~--~G~l~fGg~d~----~~~~~~pl~~~~~~~~~y~v~l~~i~vg~~~~~~ 319 (454)
++.|+..+ .+++||+||.+..+. .|.|+|||+|+ +++.|+|+.. +.+|.|+|++|+|+++.+.
T Consensus 136 ~~~~~~~~l~~qg~i~~~FS~~l~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~----~~~w~v~l~~i~v~~~~~~- 210 (330)
T 1yg9_A 136 KGKTVLENFVEENLIAPVFSIHHARFQDGEHFGEIIFGGSDWKYVDGEFTYVPLVG----DDSWKFRLDGVKIGDTTVA- 210 (330)
T ss_dssp SCCCHHHHHHHTTSSCSEEEEEEEECTTSCEEEEEEETSCCGGGEEEEEEEEEBSC----TTSCCEECSEEEETTEEEE-
T ss_pred CCCCHHHHHHhcCCCCceEEEEEcCCCCCCCCCEEEECCcCHHHccCceEEEECCC----CCEEEEEeCeEEECCEEEc-
Confidence 33444332 169999999886332 79999999985 6899999985 6799999999999998865
Q ss_pred ccccccCCCEEEcccccCccCCHhHHHHHHHHHHHhhhcCCCCCCCccccccc-cccCCcccccCeEEEEEcCCcEEEEc
Q 012892 320 AASVFTTAGTIIDSGTVITRLPPDAYTPLRTAFRQFMSKYPTAPALSLLDTCY-DFSKYSTVTLPQISLFFSGGVEVSVD 398 (454)
Q Consensus 320 ~~~~~~~~~~iiDSGT~~~~lp~~~~~~l~~~l~~~~~~~~~~~~~~~~~~Cy-~~~~~~~~~~P~i~~~f~gg~~~~l~ 398 (454)
... ..+||||||++++||++++++|.+++++... ..+. ..| .++|.....+|+|+|+| ||++++|+
T Consensus 211 -~~~---~~aiiDSGTs~~~lP~~~~~~l~~~~~~~~~----~~g~----~~~~~~~C~~~~~~p~i~f~f-gg~~~~l~ 277 (330)
T 1yg9_A 211 -PAG---TQAIIDTSKAIIVGPKAYVNPINEAIGCVVE----KTTT----RRICKLDCSKIPSLPDVTFVI-NGRNFNIS 277 (330)
T ss_dssp -CTT---CEEEECTTCSSEEEEHHHHHHHHHHHTCEEE----ECSS----CEEEEECGGGGGGSCCEEEEE-TTEEEEEC
T ss_pred -CCC---cEEEEecCCccccCCHHHHHHHHHHhCCccc----CCCc----eEEEEEECCCccccCcEEEEE-CCEEEEEC
Confidence 211 4699999999999999999999999976421 1110 023 44454445789999999 79999999
Q ss_pred CCCcEEEeCCCeEEE-EEEeCCCCCCceeechhhhceeEEEEECCCCEEEEEeCC
Q 012892 399 KTGIMYASNISQVCL-AFAGNSDPTDVSIFGNTQQHTLEVVYDVAGGKVGFAAGG 452 (454)
Q Consensus 399 ~~~~~~~~~~~~~C~-~~~~~~~~~~~~IlG~~fl~~~~vvfD~~~~rigfa~~~ 452 (454)
+++|+++. +..|+ +|.+. ...+.||||+.|||++|+|||++++|||||+++
T Consensus 278 ~~~y~~~~--~~~C~~~i~~~-~~~~~~ilG~~fl~~~y~vfD~~~~riGfA~~~ 329 (330)
T 1yg9_A 278 SQYYIQQN--GNLCYSGFQPC-GHSDHFFIGDFFVDHYYSEFNWENKTMGFGRSV 329 (330)
T ss_dssp HHHHEEEE--TTEEEESEEEE-TTCSSEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred HHHhcccC--CCcEEEEEEeC-CCCCeEEecHHHhhheEEEEECCCCEEEEEECC
Confidence 99999987 67899 67764 234579999999999999999999999999874
No 27
>2qp8_A Beta-secretase 1; BACE1, protease, alternative splicing, aspartyl protease, glycoprotein, hydrolase, membrane, transmembrane, zymogen; HET: TAR SC7; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 2qk5_A* 2qmf_A* 2qmg_A* 2qmd_A* 4djx_A* 3l59_A* 3l5b_A* 3l5c_A* 3l58_A* 3l5d_A* 3l5f_A* 4dju_A* 4djv_A* 4djw_A* 3l5e_A* 4djy_A* 2zhv_A 2zhs_A 2zhr_A 2zhu_A ...
Probab=100.00 E-value=1e-53 Score=433.52 Aligned_cols=309 Identities=20% Similarity=0.337 Sum_probs=244.4
Q ss_pred cccEEEEEEeCCCCceEEEEEECCCceeeEeCCCccccccCCCCCCCCCCCCCccceecCCCccccccccCCCCCCCCCC
Q 012892 110 AGNYIVTVGIGTPKKDLSLIFDTGSDLTWTQCEPCVKYCYEQKEPKFDPTVSQSYSNVSCSSTICTSLQSATGNSPACAS 189 (454)
Q Consensus 110 ~~~Y~~~i~iGtP~q~~~li~DTGS~~~Wv~~~~C~~~C~~~~~~~f~ps~SsT~~~~~C~~~~C~~~~~~~~~~~~c~~ 189 (454)
+..|+++|+||||||++.|++||||+++||+|.+|.. |+ +.|||++|+||+...
T Consensus 20 ~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~c~~-~~----~~y~~~~SsT~~~~~--------------------- 73 (395)
T 2qp8_A 20 GQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPHPF-LH----RYYQRQLSSTYRDLR--------------------- 73 (395)
T ss_dssp TTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCCTT-CS----CCCCGGGCTTCEEEE---------------------
T ss_pred CceEEEEEEecCCCceEEEEEecCCCceEEECCCCcc-cc----CCcCcccCCCceeCC---------------------
Confidence 5679999999999999999999999999999998842 42 789999999999875
Q ss_pred CCceeeeEeCCCCeEEEeEEEEEEEeCCCcccc-ceeeeeeecCCCCC---CCcceeeecCCCCCccc--------eehh
Q 012892 190 STCLYGIQYGDSSFSIGFFGKETLTLTPRDVFP-NFLFGCGQNNRGLF---GGAAGLMGLGRDPISLV--------SQTA 257 (454)
Q Consensus 190 ~~c~~~~~Ygdgs~~~G~~~~Dtv~~~~~~~~~-~~~FG~~~~~~~~~---~~~~GilGLg~~~~sl~--------~q~~ 257 (454)
|.|.+.|++|+ +.|.+++|+|+|++...++ .+.|++.....+.| ...+||||||++.++.. .|+.
T Consensus 74 --~~~~i~Yg~Gs-~~G~~~~Dtv~ig~g~~~~~~~~~~~~~~~~~~f~~~~~~dGIlGLg~~~~s~~~~~~~~~~~~l~ 150 (395)
T 2qp8_A 74 --KGVYVPYTQGK-WEGELGTDLVSIPHGPNVTVRANIAAITESDKFFINGSNWEGILGLAYAEIARPDDSLEPFFDSLV 150 (395)
T ss_dssp --EEEEEECSSCE-EEEEEEEEEEECTTSCSCEEEEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTTSCCHHHHHH
T ss_pred --ceEEEEECCcE-EEEEEEeEEEEECCCCCceEEEEEEEEEccCcccccccCccceEEcCchhhccCCCCCCCHHHHHH
Confidence 68999999997 5899999999998423343 36788877655544 35799999999876432 2333
Q ss_pred hh--cCCcEEEecCCC----------CCCCceEEeccCCC----CCeeeEecccCCCCCccEEEEEeEEEECcEEeeecc
Q 012892 258 TK--YKKLFSYCLPSS----------ASSTGHLTFGPGAS----KSVQFTPLSSISGGSSFYGLEMIGISVGGQKLSIAA 321 (454)
Q Consensus 258 ~~--~~~~FS~~L~~~----------~~~~G~l~fGg~d~----~~~~~~pl~~~~~~~~~y~v~l~~i~vg~~~~~~~~ 321 (454)
.+ .+++||+||.+. ....|.|+|||+|+ +++.|+|+.. ..+|.|.|++|+|+++.+.++.
T Consensus 151 ~q~~i~~~FS~~L~~~~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~----~~~~~v~l~~i~v~g~~~~~~~ 226 (395)
T 2qp8_A 151 KQTHVPNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIRR----EWYYEVIIVRVEINGQDLKMDC 226 (395)
T ss_dssp HHSCCCSCEEEEECCCSSCCCHHHHHHSCCEEEEETSCCGGGEEEEEEEEECCS----BTTBBCCEEEEEETTEECCCCG
T ss_pred HccCCcceEEEEeccccccccccccccCCCcEEEECCcCcccccCceEEeccCC----CceEEEEEEEEEECCEEcccCc
Confidence 33 147999999753 12579999999985 5899999987 5799999999999999987765
Q ss_pred ccccCCCEEEcccccCccCCHhHHHHHHHHHHHhhhcCCCCCC--CccccccccccCCcccccCeEEEEEcCCc-----E
Q 012892 322 SVFTTAGTIIDSGTVITRLPPDAYTPLRTAFRQFMSKYPTAPA--LSLLDTCYDFSKYSTVTLPQISLFFSGGV-----E 394 (454)
Q Consensus 322 ~~~~~~~~iiDSGT~~~~lp~~~~~~l~~~l~~~~~~~~~~~~--~~~~~~Cy~~~~~~~~~~P~i~~~f~gg~-----~ 394 (454)
..+....+||||||++++||+++|++|.+++.+.........+ ......|+.........+|+|+|+|.|+. +
T Consensus 227 ~~~~~~~aiiDSGTt~~~lP~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~f~f~g~~~~~~~~ 306 (395)
T 2qp8_A 227 KEYNYDKSIVDSGTTNLRLPKKVFEAAVKSIKAASSTEKFPDGFWLGEQLVCWQAGTTPWNIFPVISLYLMGEVTNQSFR 306 (395)
T ss_dssp GGGGSSCEEECTTCCSEEEEHHHHHHHHHHHHHHTTTSCCCHHHHTTCSCEEESTTCCCGGGSCCEEEEEECSSTTEEEE
T ss_pred cccCCceEEEEcCCCcEecCHHHHHHHHHHHhhhcccccCCccccccccccccccccchHhhCCcEEEEEccCCCCceEE
Confidence 5454467999999999999999999999999987431111001 01134688765444456999999996543 7
Q ss_pred EEEcCCCcEEEeCC----CeEEEE--EEeCCCCCCceeechhhhceeEEEEECCCCEEEEEeCCCC
Q 012892 395 VSVDKTGIMYASNI----SQVCLA--FAGNSDPTDVSIFGNTQQHTLEVVYDVAGGKVGFAAGGCS 454 (454)
Q Consensus 395 ~~l~~~~~~~~~~~----~~~C~~--~~~~~~~~~~~IlG~~fl~~~~vvfD~~~~rigfa~~~C~ 454 (454)
++|++++|+++... ...|++ +.+. .+.||||+.|||++|+|||++++|||||+++|+
T Consensus 307 ~~l~p~~yi~~~~~~~~~~~~C~~~~i~~~---~~~~ILG~~fl~~~yvvfD~~~~rIGfA~~~c~ 369 (395)
T 2qp8_A 307 ITILPQQYLRPVEDVATSQDDCYKFAISQS---STGTVMGAVIMEGFYVVFDRARKRIGFAVSACH 369 (395)
T ss_dssp EEECHHHHEEEECCTTCCSCEEEEECEEEE---SSCEEECHHHHTTEEEEEETTTTEEEEEEETTC
T ss_pred EEECHHHhEeecccCCCCCceEEEEEecCC---CCcEEEChHHhCCeeEEEECCCCEEEEEeccCC
Confidence 99999999998542 358974 4432 347999999999999999999999999999995
No 28
>3vf3_A Beta-secretase 1; structure-based drug design, hydrolase-hydrolase inhibitor C; HET: 0GS; 1.48A {Homo sapiens} PDB: 2f3e_A* 2f3f_A* 1ym2_A* 3dv1_A* 3dv5_A* 3k5c_A* 3k5f_A* 3k5g_A* 3pi5_A* 3qbh_A* 3duy_A* 3veu_A* 3vg1_A* 4d83_A* 4d88_A* 4d89_A* 4d8c_A* 3msk_A* 3k5d_A* 1ym4_A* ...
Probab=100.00 E-value=2.2e-53 Score=432.13 Aligned_cols=311 Identities=21% Similarity=0.349 Sum_probs=244.9
Q ss_pred cccEEEEEEeCCCCceEEEEEECCCceeeEeCCCccccccCCCCCCCCCCCCCccceecCCCccccccccCCCCCCCCCC
Q 012892 110 AGNYIVTVGIGTPKKDLSLIFDTGSDLTWTQCEPCVKYCYEQKEPKFDPTVSQSYSNVSCSSTICTSLQSATGNSPACAS 189 (454)
Q Consensus 110 ~~~Y~~~i~iGtP~q~~~li~DTGS~~~Wv~~~~C~~~C~~~~~~~f~ps~SsT~~~~~C~~~~C~~~~~~~~~~~~c~~ 189 (454)
...|+++|+||||||++.|++||||+++||+|.+| |..+ +.|+|++|+||+...
T Consensus 27 ~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c---~~~~--~~y~~~~SsT~~~~~--------------------- 80 (402)
T 3vf3_A 27 GQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPH---PFLH--RYYQRQLSSTYRDLR--------------------- 80 (402)
T ss_dssp TTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCC---TTCS--CCCCGGGCTTCEEEE---------------------
T ss_pred CCEEEEEEEECCCCeEEEEEEeCCCCceEEccCCC---Cccc--CCcCcccCcccccCC---------------------
Confidence 45799999999999999999999999999999988 5433 899999999999975
Q ss_pred CCceeeeEeCCCCeEEEeEEEEEEEeCCCcccc-ceeeeeeecCCCCC---CCcceeeecCCCCCccc--------eehh
Q 012892 190 STCLYGIQYGDSSFSIGFFGKETLTLTPRDVFP-NFLFGCGQNNRGLF---GGAAGLMGLGRDPISLV--------SQTA 257 (454)
Q Consensus 190 ~~c~~~~~Ygdgs~~~G~~~~Dtv~~~~~~~~~-~~~FG~~~~~~~~~---~~~~GilGLg~~~~sl~--------~q~~ 257 (454)
|.|.+.|++|+ +.|.+++|+|+|++...++ .+.|++.....+.+ ...+||||||++.++.. .|+.
T Consensus 81 --~~~~i~Yg~Gs-~~G~~~~D~v~ig~~~~~~~~~~~~~~~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~~~~~~L~ 157 (402)
T 3vf3_A 81 --KGVYVPYTQGK-WEGELGTDLVSIPHGPNVTVRANIAAITESDKFFINGSNWEGILGLAYAEIARPDDSLEPFFDSLV 157 (402)
T ss_dssp --EEEEEECSSCE-EEEEEEEEEEECTTSCSCEEEEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTTSCCHHHHHH
T ss_pred --CEEEEEECcEE-EEEEEEEEEEEECCccccceeeeEEEEEccccccccCCCccceEEcCchhhcccCCcCCcHHHHHH
Confidence 69999999997 6999999999998533333 34578877765543 36799999999876543 3444
Q ss_pred hh--cCCcEEEecCCC----------CCCCceEEeccCCC----CCeeeEecccCCCCCccEEEEEeEEEECcEEeeecc
Q 012892 258 TK--YKKLFSYCLPSS----------ASSTGHLTFGPGAS----KSVQFTPLSSISGGSSFYGLEMIGISVGGQKLSIAA 321 (454)
Q Consensus 258 ~~--~~~~FS~~L~~~----------~~~~G~l~fGg~d~----~~~~~~pl~~~~~~~~~y~v~l~~i~vg~~~~~~~~ 321 (454)
.+ ..++||+||.+. ....|.|+|||+|+ +++.|+|+.. ..+|.|.+++|+|+++.+.++.
T Consensus 158 ~q~~i~~~FS~~l~~~~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~----~~~w~v~l~~i~v~g~~~~~~~ 233 (402)
T 3vf3_A 158 KQTHVPNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIRR----EWYYEVIIVRVEINGQDLKMDC 233 (402)
T ss_dssp HHSCCCSCEEEEECCCC-------------EEEEESSCCGGGEEEEEEEEECSS----BTTBEECEEEEEETTEECCCCG
T ss_pred HccCCccceEEEeecccccccccccccCCCCEEEeCCcCcccccCceEEEeCCc----CcEEEEEEeEEEECCEEecccc
Confidence 33 147999999742 23489999999985 6899999987 6899999999999999988765
Q ss_pred ccccCCCEEEcccccCccCCHhHHHHHHHHHHHhhhcCCCCCC--CccccccccccCCcccccCeEEEEEcCCc-----E
Q 012892 322 SVFTTAGTIIDSGTVITRLPPDAYTPLRTAFRQFMSKYPTAPA--LSLLDTCYDFSKYSTVTLPQISLFFSGGV-----E 394 (454)
Q Consensus 322 ~~~~~~~~iiDSGT~~~~lp~~~~~~l~~~l~~~~~~~~~~~~--~~~~~~Cy~~~~~~~~~~P~i~~~f~gg~-----~ 394 (454)
..+....+||||||++++||++++++|.+++.+.......... ......|+.........+|+|+|+|.|+. +
T Consensus 234 ~~~~~~~aiiDSGTt~~~lP~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~f~f~g~~~~~~~~ 313 (402)
T 3vf3_A 234 KEYNYDKSIVDSGTTNLRLPKKVFEAAVKSIKAASSTEKFPDGFWLGEQLVCWQAGTTPWNIFPVISLYLMGEVTNQSFR 313 (402)
T ss_dssp GGGGSSCEEECTTCCSEEEEHHHHHHHHHHHHHHTTTSCCCTTGGGTCSCEEEETTCCCGGGSCCEEEEEECSSTTEEEE
T ss_pred cccCCCeEEEECCCCcccCCHHHHHHHHHHHhhhccccccCccccccccccccccccchHhhCCceEEEEecCCCCceEE
Confidence 5443467999999999999999999999999998531111111 11245788765444457999999996543 5
Q ss_pred EEEcCCCcEEEeCCC----eEEEEEEeCCCCCCceeechhhhceeEEEEECCCCEEEEEeCCCC
Q 012892 395 VSVDKTGIMYASNIS----QVCLAFAGNSDPTDVSIFGNTQQHTLEVVYDVAGGKVGFAAGGCS 454 (454)
Q Consensus 395 ~~l~~~~~~~~~~~~----~~C~~~~~~~~~~~~~IlG~~fl~~~~vvfD~~~~rigfa~~~C~ 454 (454)
++|++++|+++.... ..|++|... ...+.||||+.|||++|+|||++++|||||+++|+
T Consensus 314 ~~l~~~~yi~~~~~~~~~~~~C~~~~~~-~~~~~~ILG~~fl~~~yvvfD~~~~rIGfA~~~c~ 376 (402)
T 3vf3_A 314 ITILPQQYLRPVEDVATSQDDCYKFAIS-QSSTGTVMGAVIMEGFYVVFDRARKRIGFAVSACH 376 (402)
T ss_dssp EEECHHHHEEECCCGGGTTEEEEEECEE-EESSCEEECHHHHTTEEEEEEGGGTEEEEEEETTC
T ss_pred EEECHHHheehhccCCCCCceEEEEecc-CCCCcEEEChHHhCCeEEEEECCCCEEEEEecccC
Confidence 999999999986432 589964222 12357999999999999999999999999999995
No 29
>3lpj_A Beta-secretase 1; alzheimer'S, aspartyl protease, hydrolase; HET: TLA Z75; 1.79A {Homo sapiens} PDB: 3lpi_A* 3lpk_A* 3ohf_A* 3ohh_A* 3r2f_A* 3skf_A* 3skg_A* 4fse_A* 2hiz_A* 2p83_A* 2va7_A* 2va5_A* 2va6_A*
Probab=100.00 E-value=1.4e-53 Score=439.94 Aligned_cols=312 Identities=21% Similarity=0.349 Sum_probs=248.3
Q ss_pred CcccEEEEEEeCCCCceEEEEEECCCceeeEeCCCccccccCCCCCCCCCCCCCccceecCCCccccccccCCCCCCCCC
Q 012892 109 GAGNYIVTVGIGTPKKDLSLIFDTGSDLTWTQCEPCVKYCYEQKEPKFDPTVSQSYSNVSCSSTICTSLQSATGNSPACA 188 (454)
Q Consensus 109 ~~~~Y~~~i~iGtP~q~~~li~DTGS~~~Wv~~~~C~~~C~~~~~~~f~ps~SsT~~~~~C~~~~C~~~~~~~~~~~~c~ 188 (454)
.+..|+++|+||||||++.|++||||+++||+|.+| |..+ +.|||++|+||+...
T Consensus 72 ~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWV~~~~c---c~~~--~~y~~~~SsT~~~~~-------------------- 126 (455)
T 3lpj_A 72 SGQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPH---PFLH--RYYQRQLSSTYRDLR-------------------- 126 (455)
T ss_dssp TTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCC---TTCS--CCCCGGGCTTCEEEE--------------------
T ss_pred CCCEEEEEEEECCCCeEEEEEEcCCCcceEEecccc---cccC--CcccCCCCCCcccCC--------------------
Confidence 345899999999999999999999999999999988 6543 899999999999975
Q ss_pred CCCceeeeEeCCCCeEEEeEEEEEEEeCCCcccc-ceeeeeeecCCCCC---CCcceeeecCCCCCccc--------eeh
Q 012892 189 SSTCLYGIQYGDSSFSIGFFGKETLTLTPRDVFP-NFLFGCGQNNRGLF---GGAAGLMGLGRDPISLV--------SQT 256 (454)
Q Consensus 189 ~~~c~~~~~Ygdgs~~~G~~~~Dtv~~~~~~~~~-~~~FG~~~~~~~~~---~~~~GilGLg~~~~sl~--------~q~ 256 (454)
|.|.+.|++|+ +.|.+++|+|+|++...+. .+.|+|+....+.+ ...+||||||++.++.. .|+
T Consensus 127 ---~~~~i~Yg~Gs-~~G~~~~Dtv~ig~~~~~~~~~~~~~~~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~~~~~~L 202 (455)
T 3lpj_A 127 ---KGVYVPYTQGK-WEGELGTDLVSIPHGPNVTVRANIAAITESDKFFINGSNWEGILGLAYAEIARPDDSLEPFFDSL 202 (455)
T ss_dssp ---EEEEEECSSCE-EEEEEEEEEEECTTSCSCEEEEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTTSCCHHHHH
T ss_pred ---ccEEEEeCCeE-EEEEEEEEEEEECCCcceeeEEEEEEEEccCcccccCCCcceEEEeCccccccccCCCCcHHHHH
Confidence 69999999997 5999999999998532222 36789888776544 36799999999876542 233
Q ss_pred hhh--cCCcEEEecCCC----------CCCCceEEeccCCC----CCeeeEecccCCCCCccEEEEEeEEEECcEEeeec
Q 012892 257 ATK--YKKLFSYCLPSS----------ASSTGHLTFGPGAS----KSVQFTPLSSISGGSSFYGLEMIGISVGGQKLSIA 320 (454)
Q Consensus 257 ~~~--~~~~FS~~L~~~----------~~~~G~l~fGg~d~----~~~~~~pl~~~~~~~~~y~v~l~~i~vg~~~~~~~ 320 (454)
..+ ..++||+||.+. ....|.|+|||+|+ +++.|+|+.. ..+|.|.+++|+|+++.+.++
T Consensus 203 ~~q~~i~~~FS~~L~~~~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~----~~~w~v~l~~i~v~g~~~~~~ 278 (455)
T 3lpj_A 203 VKQTHVPNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIRR----EWYYEVIIVRVEINGQDLKMD 278 (455)
T ss_dssp HHHSCCCSCEEEEECCCSSCCCHHHHHHSCCEEEEETSCCGGGEEEEEEEEECCS----BTTBBCCEEEEEETTEECCCC
T ss_pred HHccCCCceeEEEeccccccccccccccCCCceEEECCcCcccccCceEEEecCC----CceeEEEEeEEEECCEEcccc
Confidence 333 147999999753 23589999999985 6899999987 689999999999999998876
Q ss_pred cccccCCCEEEcccccCccCCHhHHHHHHHHHHHhhhcCCCCCC--CccccccccccCCcccccCeEEEEEcCCc-----
Q 012892 321 ASVFTTAGTIIDSGTVITRLPPDAYTPLRTAFRQFMSKYPTAPA--LSLLDTCYDFSKYSTVTLPQISLFFSGGV----- 393 (454)
Q Consensus 321 ~~~~~~~~~iiDSGT~~~~lp~~~~~~l~~~l~~~~~~~~~~~~--~~~~~~Cy~~~~~~~~~~P~i~~~f~gg~----- 393 (454)
...+....+||||||++++||++++++|.+++.+.......... ......|+.........+|+|+|+|.|+.
T Consensus 279 ~~~~~~~~aiiDSGTt~~~lP~~~~~~i~~~i~~~~~~~~~~~~~~~g~~~~C~~~~~~~~~~~P~i~f~f~g~~~~~~~ 358 (455)
T 3lpj_A 279 CKEYNYDKSIVDSGTTNLRLPKKVFEAAVKSIKAASSTEKFPDGFWLGEQLVCWQAGTTPWNIFPVISLYLMGEVTNQSF 358 (455)
T ss_dssp GGGGGSSCEEECTTSSSEEEEHHHHHHHHHHHHHHTTTSCCCHHHHTTCSCEEESTTCCCGGGSCCEEEEEECSSTTEEE
T ss_pred ccccCCCeEEEECCCcceeCCHHHHHHHHHHhhhhccccccCcccccCcceecccccCCchhcCCcEEEEEcCCCcCceE
Confidence 55443467999999999999999999999999998531111111 11245788765444456999999996543
Q ss_pred EEEEcCCCcEEEeCCC----eEEEEEEeCCCCCCceeechhhhceeEEEEECCCCEEEEEeCCCC
Q 012892 394 EVSVDKTGIMYASNIS----QVCLAFAGNSDPTDVSIFGNTQQHTLEVVYDVAGGKVGFAAGGCS 454 (454)
Q Consensus 394 ~~~l~~~~~~~~~~~~----~~C~~~~~~~~~~~~~IlG~~fl~~~~vvfD~~~~rigfa~~~C~ 454 (454)
+++|++++|+++.... ..|++|... ...+.||||+.|||++|+|||++++|||||+++|+
T Consensus 359 ~~~l~~~~yi~~~~~~~~~~~~C~~f~~~-~~~~~~ILG~~fl~~~yvvfD~~~~rIGfA~~~c~ 422 (455)
T 3lpj_A 359 RITILPQQYLRPVEDVATSQDDCYKFAIS-QSSTGTVMGAVIMEGFYVVFDRARKRIGFAVSACH 422 (455)
T ss_dssp EEEECHHHHEEEECCTTCCSCEEEEECEE-EESSCEEECHHHHTTEEEEEETTTTEEEEEEETTC
T ss_pred EEEECHHHheEeccCCCCCCceEEEEecc-CCCCcEEEChHHhCCeEEEEECCCCEEEEEecccc
Confidence 5999999999986432 589974322 12357999999999999999999999999999994
No 30
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A*
Probab=100.00 E-value=3.7e-53 Score=417.93 Aligned_cols=293 Identities=25% Similarity=0.366 Sum_probs=237.7
Q ss_pred CcccEEEEEEeCCCCceEEEEEECCCceeeEeCCCccccccCCCCCCCCCCCCCccceecCCCccccccccCCCCCCCCC
Q 012892 109 GAGNYIVTVGIGTPKKDLSLIFDTGSDLTWTQCEPCVKYCYEQKEPKFDPTVSQSYSNVSCSSTICTSLQSATGNSPACA 188 (454)
Q Consensus 109 ~~~~Y~~~i~iGtP~q~~~li~DTGS~~~Wv~~~~C~~~C~~~~~~~f~ps~SsT~~~~~C~~~~C~~~~~~~~~~~~c~ 188 (454)
.+.+|+++|+|| ||++.|++||||+++||+|.+|.. |..+.++.|||++|+ ++..
T Consensus 13 ~~~~Y~~~i~iG--~q~~~v~~DTGSs~lWv~~~~C~~-~~c~~~~~y~~~~Ss-~~~~--------------------- 67 (323)
T 1izd_A 13 NDEEYITQVTVG--DDTLGLDFDTGSADLWVFSSQTPS-SERSGHDYYTPGSSA-QKID--------------------- 67 (323)
T ss_dssp GGCCEEEEEEET--TEEEEEEEETTCCCEEECBTTSCH-HHHTTCCCBCCCTTC-EEEE---------------------
T ss_pred CCCEEEEEEEEC--CEEEEEEEcCCCcceEEecCCCCc-ccccCCCCCCccccC-CccC---------------------
Confidence 468899999999 899999999999999999999954 544455899999999 5533
Q ss_pred CCCceeeeEeCCCCeEEEeEEEEEEEeCCCccccceeeeeeecCCCCC---CCcceeeecCCCCCccc---------eeh
Q 012892 189 SSTCLYGIQYGDSSFSIGFFGKETLTLTPRDVFPNFLFGCGQNNRGLF---GGAAGLMGLGRDPISLV---------SQT 256 (454)
Q Consensus 189 ~~~c~~~~~Ygdgs~~~G~~~~Dtv~~~~~~~~~~~~FG~~~~~~~~~---~~~~GilGLg~~~~sl~---------~q~ 256 (454)
.|.|.+.|++|+.+.|.+++|+|+|++ .+++++.|||++...+.+ ...+||||||++.++.+ +|+
T Consensus 68 --~~~~~i~Yg~Gs~~~G~~~~D~v~ig~-~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~p~~~~~~~~~l 144 (323)
T 1izd_A 68 --GATWSISYGDGSSASGDVYKDKVTVGG-VSYDSQAVESAEKVSSEFTQDTANDGLLGLAFSSINTVQPTPQKTFFDNV 144 (323)
T ss_dssp --EEEEEEECTTSCEEEEEEEEEEEEETT-EEEEEEEEEEEEEECHHHHHCTTCCEEEECSCGGGCCCBSSCCCCHHHHH
T ss_pred --CCeEEEEcCCCCeEEEEEEEEEEEECC-EEECceEEEEEEeccccccccCCCceEEecCcccccccCCCCCCCHHHHH
Confidence 269999999998889999999999998 689999999999876532 36899999999877653 333
Q ss_pred hhh-cCCcEEEecCCCCCCCceEEeccCCC----CCeeeEecccCCCCCccEEEEEeEEEECcEEeeeccccccCCCEEE
Q 012892 257 ATK-YKKLFSYCLPSSASSTGHLTFGPGAS----KSVQFTPLSSISGGSSFYGLEMIGISVGGQKLSIAASVFTTAGTII 331 (454)
Q Consensus 257 ~~~-~~~~FS~~L~~~~~~~G~l~fGg~d~----~~~~~~pl~~~~~~~~~y~v~l~~i~vg~~~~~~~~~~~~~~~~ii 331 (454)
..+ .+++||+||.+. ..|.|+|||+|+ +++.|+|+.. ...+|.|++++|+|++ .+. ... ..+||
T Consensus 145 ~~~i~~~~FS~~L~~~--~~G~l~fGg~d~~~~~g~l~~~p~~~---~~~~w~v~l~~i~v~~-~~~--~~~---~~aii 213 (323)
T 1izd_A 145 KSSLSEPIFAVALKHN--APGVYDFGYTDSSKYTGSITYTDVDN---SQGFWGFTADGYSIGS-DSS--SDS---ITGIA 213 (323)
T ss_dssp GGGSSSSEEEEECCTT--SCEEEEESSCCTTSEEEEEEEEECBC---TTSSCEEEESEEEETT-EEE--CCC---EEEEE
T ss_pred HHhccCcEEEEEccCC--CCCEEEECCcCccccccceEEEECCC---CCceEEEEECeEEECC-ccc--CCC---ceEEE
Confidence 322 268999999874 479999999985 5899999984 2578999999999999 543 222 35999
Q ss_pred cccccCccCCHhHHHHHHHHHHHhhhcCCCCCCCccccccccccCCcccccCeEEEEEcCCcEEEEcCCCcEEEeCCCeE
Q 012892 332 DSGTVITRLPPDAYTPLRTAFRQFMSKYPTAPALSLLDTCYDFSKYSTVTLPQISLFFSGGVEVSVDKTGIMYASNISQV 411 (454)
Q Consensus 332 DSGT~~~~lp~~~~~~l~~~l~~~~~~~~~~~~~~~~~~Cy~~~~~~~~~~P~i~~~f~gg~~~~l~~~~~~~~~~~~~~ 411 (454)
||||++++||++++++|.+++.+.. +....+. |.++|. ..+|+|+|+| ||++++||+++|+++...+..
T Consensus 214 DSGTs~~~lp~~~~~~i~~~i~ga~--~~~~~g~------~~~~C~--~~~P~i~f~f-gg~~~~i~~~~~~~~~~~~~~ 282 (323)
T 1izd_A 214 DTGTTLLLLDDSIVDAYYEQVNGAS--YDSSQGG------YVFPSS--ASLPDFSVTI-GDYTATVPGEYISFADVGNGQ 282 (323)
T ss_dssp CTTCCSEEECHHHHHHHHTTSTTCE--EETTTTE------EEEETT--CCCCCEEEEE-TTEEEEECHHHHEEEECSTTE
T ss_pred eCCCcceeCCHHHHHHHHHhCCCcE--EcCcCCE------EEEECC--CCCceEEEEE-CCEEEecCHHHeEEecCCCCe
Confidence 9999999999999999999885321 1111122 233333 3689999999 899999999999988655678
Q ss_pred EEE-EEeCCCCCCceeechhhhceeEEEEECCCCEEEEEeCC
Q 012892 412 CLA-FAGNSDPTDVSIFGNTQQHTLEVVYDVAGGKVGFAAGG 452 (454)
Q Consensus 412 C~~-~~~~~~~~~~~IlG~~fl~~~~vvfD~~~~rigfa~~~ 452 (454)
|++ |.+.+ ..+.||||+.|||++|+|||++++|||||++.
T Consensus 283 C~~~i~~~~-~~~~~IlG~~fl~~~y~vfD~~~~riGfA~~a 323 (323)
T 1izd_A 283 TFGGIQSNS-GIGFSIFGDVFLKSQYVVFDASGPRLGFAAQA 323 (323)
T ss_dssp EEESEEECT-TTSSEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred EEEEEEcCC-CCCcEEEChHHhcCEEEEEECCCCEEEEeeCC
Confidence 995 77653 34689999999999999999999999999864
No 31
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2
Probab=100.00 E-value=4.9e-53 Score=417.51 Aligned_cols=294 Identities=24% Similarity=0.348 Sum_probs=238.4
Q ss_pred CcccEEEEEEeCCCCceEEEEEECCCceeeEeCCCccccccCCCCCCCCCCCCCccceecCCCccccccccCCCCCCCCC
Q 012892 109 GAGNYIVTVGIGTPKKDLSLIFDTGSDLTWTQCEPCVKYCYEQKEPKFDPTVSQSYSNVSCSSTICTSLQSATGNSPACA 188 (454)
Q Consensus 109 ~~~~Y~~~i~iGtP~q~~~li~DTGS~~~Wv~~~~C~~~C~~~~~~~f~ps~SsT~~~~~C~~~~C~~~~~~~~~~~~c~ 188 (454)
.+.+|+++|+|| ||++.|++||||+++||+|.+|.. |..+.++.|||++|+ ++..
T Consensus 12 ~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~~C~~-~~c~~~~~y~~~~Ss-~~~~--------------------- 66 (325)
T 1ibq_A 12 NDEEYLTPVTVG--KSTLHLDFDTGSADLWVFSDELPS-SEQTGHDLYTPSSSA-TKLS--------------------- 66 (325)
T ss_dssp TTSCEEEEEEEB--TEEEEEEEETTCCCEEEECTTSCH-HHHTTSCCCBCCSSC-EECT---------------------
T ss_pred CCCEEEEEEEEC--CEEEEEEEeCCCccceEeeCCCCc-cccCCCCCCCchhcC-CccC---------------------
Confidence 578899999999 899999999999999999999954 544555899999998 4421
Q ss_pred CCCceeeeEeCCCCeEEEeEEEEEEEeCCCccccceeeeeeecCCCCC---CCcceeeecCCCCCcc---------ceeh
Q 012892 189 SSTCLYGIQYGDSSFSIGFFGKETLTLTPRDVFPNFLFGCGQNNRGLF---GGAAGLMGLGRDPISL---------VSQT 256 (454)
Q Consensus 189 ~~~c~~~~~Ygdgs~~~G~~~~Dtv~~~~~~~~~~~~FG~~~~~~~~~---~~~~GilGLg~~~~sl---------~~q~ 256 (454)
.|.|.+.|++|+.+.|.+++|+|+|++ ..++++.|||++...+.+ ...+||||||++.++. ++|+
T Consensus 67 --~~~~~i~Yg~Gs~~~G~~~~D~v~ig~-~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~p~~~~~~~~~l 143 (325)
T 1ibq_A 67 --GYSWDISYGDGSSASGDVYRDTVTVGG-VTTNKQAVEAASKISSEFVQDTANDGLLGLAFSSINTVQPKAQTTFFDTV 143 (325)
T ss_dssp --TCBEEEECSSSCEEEEEEEEEEEEETT-EEEEEEEEEEEEEECHHHHTSTTCCEEEECSCGGGCCCBSSCCCCHHHHH
T ss_pred --CCEEEEEeCCCCEEEEEEEEeEEEECC-EEEcceEEEEEEecCccccccCCCceEEEeCcccccccCcCCCCCHHHHH
Confidence 269999999998899999999999998 689999999999876522 3689999999987664 3455
Q ss_pred hhhc-CCcEEEecCCCCCCCceEEeccCCC----CCeeeEecccCCCCCccEEEEEeEEEECcEEeeeccccccCCCEEE
Q 012892 257 ATKY-KKLFSYCLPSSASSTGHLTFGPGAS----KSVQFTPLSSISGGSSFYGLEMIGISVGGQKLSIAASVFTTAGTII 331 (454)
Q Consensus 257 ~~~~-~~~FS~~L~~~~~~~G~l~fGg~d~----~~~~~~pl~~~~~~~~~y~v~l~~i~vg~~~~~~~~~~~~~~~~ii 331 (454)
..+. +++||+||.+. ..|.|+|||+|+ +++.|+|+.. ...+|.|+|++|+|+++.+. ... ..+||
T Consensus 144 ~~~i~~~~FS~~l~~~--~~G~l~fGg~d~~~~~g~l~~~p~~~---~~~~w~v~l~~i~v~~~~~~--~~~---~~aii 213 (325)
T 1ibq_A 144 KSQLDSPLFAVQLKHD--APGVYDFGYIDDSKYTGSITYTDADS---SQGYWGFSTDGYSIGDGSSS--SSG---FSAIA 213 (325)
T ss_dssp GGGSSSSEEEEEEETT--EEEEEEESSCCGGGBSSCCEEEECBC---TTSSCEEEECEEEETTSCCB--SCC---EEEEE
T ss_pred HHhcCCcEEEEEecCC--CCceEEECCcChhhccCceEEEEcCC---CCceEEEEECcEEECCeecc--CCC---ceEEE
Confidence 4432 68999999874 479999999884 7899999984 25789999999999998653 221 35999
Q ss_pred cccccCccCCHhHHHHHHHHHHHhhhcCCCCCCCccccccccccCCcccccCeEEEEEcCCcEEEEcCCCcEEEeC--CC
Q 012892 332 DSGTVITRLPPDAYTPLRTAFRQFMSKYPTAPALSLLDTCYDFSKYSTVTLPQISLFFSGGVEVSVDKTGIMYASN--IS 409 (454)
Q Consensus 332 DSGT~~~~lp~~~~~~l~~~l~~~~~~~~~~~~~~~~~~Cy~~~~~~~~~~P~i~~~f~gg~~~~l~~~~~~~~~~--~~ 409 (454)
||||++++||++++++|.+++.++. +....+...+ +|+ ..+|+|+|+| ||++++||+++|+++.. ..
T Consensus 214 DSGTt~~~lP~~~~~~i~~~i~~a~--~~~~~g~~~~-~C~-------~~~P~i~f~f-gg~~~~i~~~~~~~~~~~~~~ 282 (325)
T 1ibq_A 214 DTGTTLILLDDEIVSAYYEQVSGAQ--ESYEAGGYVF-SCS-------TDLPDFTVVI-GDYKAVVPGKYINYAPVSTGS 282 (325)
T ss_dssp CTTCCSEEECHHHHHHHHTTSTTCB--CCSSSSSCEE-ETT-------CCCCCEEEEE-TTEEEEECHHHHEEEESSTTC
T ss_pred eCCCCcEeCCHHHHHHHHHhCCCce--EcCcCCeEEE-EcC-------CCCCcEEEEE-CCEEEEECHHHhcccccCCCC
Confidence 9999999999999999999884331 2222222222 353 3689999999 79999999999998753 34
Q ss_pred eEEEE-EEeCCCCCCceeechhhhceeEEEEECCCCEEEEEeCC
Q 012892 410 QVCLA-FAGNSDPTDVSIFGNTQQHTLEVVYDVAGGKVGFAAGG 452 (454)
Q Consensus 410 ~~C~~-~~~~~~~~~~~IlG~~fl~~~~vvfD~~~~rigfa~~~ 452 (454)
..|++ +.+.+ ..+.||||+.|||++|+|||++++|||||+++
T Consensus 283 ~~C~~~i~~~~-~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 325 (325)
T 1ibq_A 283 STCYGGIQSNS-GLGLSILGDVFLKSQYVVFNSEGPKLGFAAQA 325 (325)
T ss_dssp SEEEESEEECT-TTCSEEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred CeEEEEEEcCC-CCCceEEChHHhcCEEEEEECCCCEEEeeeCC
Confidence 78995 66542 34689999999999999999999999999874
No 32
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2
Probab=100.00 E-value=1.4e-52 Score=416.97 Aligned_cols=296 Identities=24% Similarity=0.413 Sum_probs=238.7
Q ss_pred eeccccCCccCcccEEEEEEeCCCCceEEEEEECCCceeeEeCCCccccccCCCCCCCCCCCCCccceecCCCccccccc
Q 012892 99 TLPAKDGSVVGAGNYIVTVGIGTPKKDLSLIFDTGSDLTWTQCEPCVKYCYEQKEPKFDPTVSQSYSNVSCSSTICTSLQ 178 (454)
Q Consensus 99 ~~p~~~~~~~~~~~Y~~~i~iGtP~q~~~li~DTGS~~~Wv~~~~C~~~C~~~~~~~f~ps~SsT~~~~~C~~~~C~~~~ 178 (454)
++|+.+. +..|+++|+||||||++.|++||||+++||+|. +.|+|++|+++..
T Consensus 4 ~~~l~n~----~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~-----------~~y~~s~Ss~~~~------------ 56 (340)
T 1wkr_A 4 SVPATNQ----LVDYVVNVGVGSPATTYSLLVDTGSSNTWLGAD-----------KSYVKTSTSSATS------------ 56 (340)
T ss_dssp EEEEEEC----SSCEEEEEEETTTTEEEEEEEETTCCCCEECSS-----------SCCCCCTTCEEEE------------
T ss_pred cEeeecc----CcEEEEEEEECCCCcEEEEEEeCCChhheecCC-----------CccCCcCCccccC------------
Confidence 5777743 468999999999999999999999999999763 5799999886432
Q ss_pred cCCCCCCCCCCCCceeeeEeCCCCeEEEeEEEEEEEeCCCccccceeeeeeecCCCCCCCcceeeecCCCCCccc-----
Q 012892 179 SATGNSPACASSTCLYGIQYGDSSFSIGFFGKETLTLTPRDVFPNFLFGCGQNNRGLFGGAAGLMGLGRDPISLV----- 253 (454)
Q Consensus 179 ~~~~~~~~c~~~~c~~~~~Ygdgs~~~G~~~~Dtv~~~~~~~~~~~~FG~~~~~~~~~~~~~GilGLg~~~~sl~----- 253 (454)
|.|.+.|++|+ +.|.+++|+|+|++ .+++++.|||++...+ +...+||||||++.+++.
T Consensus 57 -------------~~~~i~Yg~Gs-~~G~~~~Dtv~~g~-~~v~~~~fg~~~~~~~-~~~~~GilGLg~~~~s~~~~~~~ 120 (340)
T 1wkr_A 57 -------------DKVSVTYGSGS-FSGTEYTDTVTLGS-LTIPKQSIGVASRDSG-FDGVDGILGVGPVDLTVGTLSPH 120 (340)
T ss_dssp -------------EEEEEECSSCE-EEEEEEEEEEEETT-EEEEEEEEEEEEEEES-CTTCSEEEECSCGGGGTTSEESC
T ss_pred -------------ceEEEEECCcE-EEEEEEEEEEEECC-EEEcceEEEEEEccCC-CcCCCcEEECCcccccccccccc
Confidence 69999999997 89999999999998 7899999999998766 557899999999877652
Q ss_pred ---------eehhhh---cCCcEEEecCCCC---CCCceEEeccCCC----CCeeeEecccCCCCCccEEEEEeEEEECc
Q 012892 254 ---------SQTATK---YKKLFSYCLPSSA---SSTGHLTFGPGAS----KSVQFTPLSSISGGSSFYGLEMIGISVGG 314 (454)
Q Consensus 254 ---------~q~~~~---~~~~FS~~L~~~~---~~~G~l~fGg~d~----~~~~~~pl~~~~~~~~~y~v~l~~i~vg~ 314 (454)
.++..+ .+++||+||.+.. ...|.|+|||+|+ +++.|+|+..++....+|.|. ++|+|++
T Consensus 121 ~~~~~~~~~~~l~~~g~i~~~~FS~~l~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~~w~v~-~~i~v~~ 199 (340)
T 1wkr_A 121 TSTSIPTVTDNLFSQGTIPTNLLAVSFEPTTSESSTNGELTFGATDSSKYTGSITYTPITSTSPASAYWGIN-QSIRYGS 199 (340)
T ss_dssp TTCCCCCHHHHHHHTTSSSSSEEEEECCCCSSSSEEEEEEEESSCCGGGCSSCCEEEECCSSTTGGGSSEEE-EEEEETT
T ss_pred ccccCCCHHHHHHHcCCCCCCEEEEEecCCCCCCCCCcEEEEcccChhhcccceEEEECccCCCCcceEEEE-eeEEECC
Confidence 223322 1589999998642 2479999999884 689999999854446799999 9999998
Q ss_pred -EEeeeccccccCCCEEEcccccCccCCHhHHHHHHHHHHHhhhcCCCCCCCccccccccccCCcccccCeEEEEEcCCc
Q 012892 315 -QKLSIAASVFTTAGTIIDSGTVITRLPPDAYTPLRTAFRQFMSKYPTAPALSLLDTCYDFSKYSTVTLPQISLFFSGGV 393 (454)
Q Consensus 315 -~~~~~~~~~~~~~~~iiDSGT~~~~lp~~~~~~l~~~l~~~~~~~~~~~~~~~~~~Cy~~~~~~~~~~P~i~~~f~gg~ 393 (454)
+.+..+ ..+||||||++++||++++++|.+++++... ...+ +|.++|.....+|+|+|+| +|.
T Consensus 200 ~~~l~~~------~~aiiDSGTt~~~lP~~~~~~l~~~~~a~~~---~~~g------~~~~~C~~~~~~p~i~f~f-~g~ 263 (340)
T 1wkr_A 200 STSILSS------TAGIVDTGTTLTLIASDAFAKYKKATGAVAD---NNTG------LLRLTTAQYANLQSLFFTI-GGQ 263 (340)
T ss_dssp TEEEEEE------EEEEECTTBCSEEECHHHHHHHHHHHTCEEC---TTTS------SEEECHHHHHTCCCEEEEE-TTE
T ss_pred CeEccCC------CeEEEeCCcccccCCHHHHHHHHHhhCCEEc---CCCC------eEEeeccccccCCcEEEEE-CCE
Confidence 877532 3599999999999999999999988876521 1111 2444454445789999999 789
Q ss_pred EEEEcCCCcEEEeC-------CCeEEE-EEEeCCC---CCCceeechhhhceeEEEEECCCCEEEEEeCCCC
Q 012892 394 EVSVDKTGIMYASN-------ISQVCL-AFAGNSD---PTDVSIFGNTQQHTLEVVYDVAGGKVGFAAGGCS 454 (454)
Q Consensus 394 ~~~l~~~~~~~~~~-------~~~~C~-~~~~~~~---~~~~~IlG~~fl~~~~vvfD~~~~rigfa~~~C~ 454 (454)
++.|++++|+++.. ....|+ ++.+... .+..||||+.|||++|+|||++++|||||+++|+
T Consensus 264 ~~~i~~~~yi~~~~~~~~~g~~~~~c~~~~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~~~ 335 (340)
T 1wkr_A 264 TFELTANAQIWPRNLNTAIGGSASSVYLIVGDLGSDSGEGLDFINGLTFLERFYSVYDTTNKRLGLATTSFT 335 (340)
T ss_dssp EEEECTGGGBCCGGGGGGGTCCSSCEEBCEEECSSCTTSSCCEEECHHHHTSEEEEEETTTTEEEEEECTTT
T ss_pred EEEEcHHHhccccccccccCCCCceEEEEEecCCCCCCCCcceEeChHhhhheEEEEeCCCCeEEEEecCCC
Confidence 99999999998743 234676 6765321 2346999999999999999999999999999985
No 33
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A
Probab=100.00 E-value=8e-53 Score=415.66 Aligned_cols=292 Identities=24% Similarity=0.343 Sum_probs=235.9
Q ss_pred CcccEEEEEEeCCCCceEEEEEECCCceeeEeCCCccccccCCCCCCCCCCCCCccceecCCCccccccccCCCCCCCCC
Q 012892 109 GAGNYIVTVGIGTPKKDLSLIFDTGSDLTWTQCEPCVKYCYEQKEPKFDPTVSQSYSNVSCSSTICTSLQSATGNSPACA 188 (454)
Q Consensus 109 ~~~~Y~~~i~iGtP~q~~~li~DTGS~~~Wv~~~~C~~~C~~~~~~~f~ps~SsT~~~~~C~~~~C~~~~~~~~~~~~c~ 188 (454)
.+.+|+++|+|| ||++.|++||||+++||+|.+|.. |..+.++.|||++|+ ++..
T Consensus 13 ~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~~C~~-~~c~~~~~y~~~~Ss-~~~~--------------------- 67 (323)
T 1bxo_A 13 NDEEYITPVTIG--GTTLNLNFDTGSADLWVFSTELPA-SQQSGHSVYNPSATG-KELS--------------------- 67 (323)
T ss_dssp GGSCEEEEEEET--TEEEEEEEETTCCCEEECBTTSCH-HHHTTSCCBCHHHHC-EEEE---------------------
T ss_pred CCCEEEEEEEEC--CEEEEEEEeCCCcceEEecCCCCc-hhccCCCCCCcccCC-cccC---------------------
Confidence 468899999999 899999999999999999999954 544455899999998 5543
Q ss_pred CCCceeeeEeCCCCeEEEeEEEEEEEeCCCccccceeeeeeecCCCCC---CCcceeeecCCCCCccc---------eeh
Q 012892 189 SSTCLYGIQYGDSSFSIGFFGKETLTLTPRDVFPNFLFGCGQNNRGLF---GGAAGLMGLGRDPISLV---------SQT 256 (454)
Q Consensus 189 ~~~c~~~~~Ygdgs~~~G~~~~Dtv~~~~~~~~~~~~FG~~~~~~~~~---~~~~GilGLg~~~~sl~---------~q~ 256 (454)
.|.|.+.|++|+.+.|.+++|+|+|++ ..++++.|||++...+.+ ...+||||||++.++.+ +|+
T Consensus 68 --~~~~~i~Yg~Gs~~~G~~~~D~v~ig~-~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~~~~l 144 (323)
T 1bxo_A 68 --GYTWSISYGDGSSASGNVFTDSVTVGG-VTAHGQAVQAAQQISAQFQQDTNNDGLLGLAFSSINTVQPQSQTTFFDTV 144 (323)
T ss_dssp --EEEEEEECTTSCEEEEEEEEEEEEETT-EEEEEEEEEEEEEECHHHHTCTTCSEEEECSCGGGCCCBSSCCCCHHHHH
T ss_pred --CCeEEEEeCCCCeEEEEEEEEEEEECC-EEECcEEEEEEEecCcccccCCCCceEEEeCcccccccccCCCCCHHHHH
Confidence 279999999998889999999999998 689999999999876532 36899999999876653 333
Q ss_pred hhhc-CCcEEEecCCCCCCCceEEeccCCC----CCeeeEecccCCCCCccEEEEEeEEEECcEEeeeccccccCCCEEE
Q 012892 257 ATKY-KKLFSYCLPSSASSTGHLTFGPGAS----KSVQFTPLSSISGGSSFYGLEMIGISVGGQKLSIAASVFTTAGTII 331 (454)
Q Consensus 257 ~~~~-~~~FS~~L~~~~~~~G~l~fGg~d~----~~~~~~pl~~~~~~~~~y~v~l~~i~vg~~~~~~~~~~~~~~~~ii 331 (454)
..+. +++||+||.+. ..|.|+|||+|+ +++.|+|+... ..+|.|+|++|+|++ .. ... ..+||
T Consensus 145 ~~~i~~~~FS~~L~~~--~~G~l~fGg~d~~~~~g~l~~~p~~~~---~~~w~v~l~~i~v~~-~~---~~~---~~aii 212 (323)
T 1bxo_A 145 KSSLAQPLFAVALKHQ--QPGVYDFGFIDSSKYTGSLTYTGVDNS---QGFWSFNVDSYTAGS-QS---GDG---FSGIA 212 (323)
T ss_dssp GGGBSSSEEEEECCSS--SCEEEEESSCCGGGBSSCCEEEECBCT---TSSCEEEEEEEEETT-EE---EEE---EEEEE
T ss_pred HHhcCCcEEEEEEeCC--CCceEEEeCcChhhccCceEEEECCCC---CCeEEEEEeeEEECC-cc---CCC---ceEEE
Confidence 3222 68999999874 479999999884 78999999852 578999999999999 22 111 35999
Q ss_pred cccccCccCCHhHHHHHHHHHHHhhhcCCCCCCCccccccccccCCcccccCeEEEEEcCCcEEEEcCCCcEEEeC-CCe
Q 012892 332 DSGTVITRLPPDAYTPLRTAFRQFMSKYPTAPALSLLDTCYDFSKYSTVTLPQISLFFSGGVEVSVDKTGIMYASN-ISQ 410 (454)
Q Consensus 332 DSGT~~~~lp~~~~~~l~~~l~~~~~~~~~~~~~~~~~~Cy~~~~~~~~~~P~i~~~f~gg~~~~l~~~~~~~~~~-~~~ 410 (454)
||||++++||++++++|.+++.++. +....+. |.++|. ..+|+|+|+| ||++++||+++|+++.. .+.
T Consensus 213 DSGTs~~~lP~~~~~~l~~~i~~a~--~~~~~g~------~~~~C~--~~~P~i~f~f-gg~~~~l~~~~~~~~~~~~~~ 281 (323)
T 1bxo_A 213 DTGTTLLLLDDSVVSQYYSQVSGAQ--QDSNAGG------YVFDCS--TNLPDFSVSI-SGYTATVPGSLINYGPSGDGS 281 (323)
T ss_dssp CTTCSSEEECHHHHHHHHTTSTTCE--EETTTTE------EEECTT--CCCCCEEEEE-TTEEEEECHHHHEEEECSSSS
T ss_pred eCCCCceeCCHHHHHHHHHhCCCce--EcCcCCE------EEEECC--CCCceEEEEE-CCEEEEECHHHeEEeccCCCC
Confidence 9999999999999999999884331 1111122 223333 3689999999 79999999999998763 347
Q ss_pred EEEE-EEeCCCCCCceeechhhhceeEEEEECCCCEEEEEeCC
Q 012892 411 VCLA-FAGNSDPTDVSIFGNTQQHTLEVVYDVAGGKVGFAAGG 452 (454)
Q Consensus 411 ~C~~-~~~~~~~~~~~IlG~~fl~~~~vvfD~~~~rigfa~~~ 452 (454)
.|++ +.+.+ ..+.||||+.|||++|+|||++++|||||++.
T Consensus 282 ~C~~~i~~~~-~~~~~ILG~~fl~~~y~vfD~~~~riGfA~~a 323 (323)
T 1bxo_A 282 TCLGGIQSNS-GIGFSIFGDIFLKSQYVVFDSDGPQLGFAPQA 323 (323)
T ss_dssp CEEESEEECT-TCSSEEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred eEEEEEECCC-CCCcEEEChHHHcCEEEEEECCCCEEEEecCC
Confidence 8995 66653 34689999999999999999999999999874
No 34
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=100.00 E-value=2.1e-42 Score=326.56 Aligned_cols=218 Identities=24% Similarity=0.449 Sum_probs=184.7
Q ss_pred eeccccCCccCcccEEEEEEeCCCCceEEEEEECCCceeeEeCCCcc--ccccCCCCCCCCCCCCCccceecCCCccccc
Q 012892 99 TLPAKDGSVVGAGNYIVTVGIGTPKKDLSLIFDTGSDLTWTQCEPCV--KYCYEQKEPKFDPTVSQSYSNVSCSSTICTS 176 (454)
Q Consensus 99 ~~p~~~~~~~~~~~Y~~~i~iGtP~q~~~li~DTGS~~~Wv~~~~C~--~~C~~~~~~~f~ps~SsT~~~~~C~~~~C~~ 176 (454)
.+|+. +..+.+|+++|.||||||++.|++||||+++||+|.+|. ..|..+ +.|||++|+||+...
T Consensus 4 ~~~l~---n~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C~~~~~C~~~--~~y~~~~SsT~~~~~-------- 70 (239)
T 1b5f_A 4 VVALT---NDRDTSYFGEIGIGTPPQKFTVIFDTGSSVLWVPSSKCINSKACRAH--SMYESSDSSTYKENG-------- 70 (239)
T ss_dssp EEEEE---EETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSCHHHHTS--CCBCGGGCTTCEEEE--------
T ss_pred eeeee---ecCCCEEEEEEEECCCCeEEEEEEeCCCcceEEEcCCCCCCcccCCC--CCCCCccCCCeeeCC--------
Confidence 46665 355789999999999999999999999999999999994 358865 899999999999875
Q ss_pred cccCCCCCCCCCCCCceeeeEeCCCCeEEEeEEEEEEEeCCCccccceeeeeeecCCC-CC--CCcceeeecCCCCCc--
Q 012892 177 LQSATGNSPACASSTCLYGIQYGDSSFSIGFFGKETLTLTPRDVFPNFLFGCGQNNRG-LF--GGAAGLMGLGRDPIS-- 251 (454)
Q Consensus 177 ~~~~~~~~~~c~~~~c~~~~~Ygdgs~~~G~~~~Dtv~~~~~~~~~~~~FG~~~~~~~-~~--~~~~GilGLg~~~~s-- 251 (454)
|.|.+.|++|+ +.|.+++|+|+|++ ..++++.|||++...+ .| ...+||||||++.++
T Consensus 71 ---------------~~~~i~Yg~Gs-~~G~~~~D~v~~g~-~~v~~~~fg~~~~~~~~~f~~~~~~GilGLg~~~~s~p 133 (239)
T 1b5f_A 71 ---------------TFGAIIYGTGS-ITGFFSQDSVTIGD-LVVKEQDFIEATDEADNVFLHRLFDGILGLSFQTISVP 133 (239)
T ss_dssp ---------------EEEEEECSSCE-EEEEEEEEEEEETT-EEEEEEEEEEEEEECHHHHTTCSCCEEEECSCCSSSCC
T ss_pred ---------------cEEEEEECCCc-EEEEEEEEEEEECC-cEEccEEEEEEEeccCccccccCcceEEecCccccccH
Confidence 68999999997 78999999999998 6899999999988654 12 368999999999987
Q ss_pred ----cceehhhhcCCcEEEecCCCC--CCCceEEeccCCC----CCeeeEecccCCCCCccEEEEEeEEEECcEEeeecc
Q 012892 252 ----LVSQTATKYKKLFSYCLPSSA--SSTGHLTFGPGAS----KSVQFTPLSSISGGSSFYGLEMIGISVGGQKLSIAA 321 (454)
Q Consensus 252 ----l~~q~~~~~~~~FS~~L~~~~--~~~G~l~fGg~d~----~~~~~~pl~~~~~~~~~y~v~l~~i~vg~~~~~~~~ 321 (454)
|++|.... +++||+||.+.. ...|.|+|||+|+ +++.|+|+.. ..+|.|.|++|+|+++.+.+..
T Consensus 134 ~~~~l~~qg~i~-~~~FS~~l~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~----~~~~~v~l~~i~v~~~~~~~~~ 208 (239)
T 1b5f_A 134 VWYNMLNQGLVK-ERRFSFWLNRNVDEEEGGELVFGGLDPNHFRGDHTYVPVTY----QYYWQFGIGDVLIGDKSTGFCA 208 (239)
T ss_dssp HHHHHHHTTCCS-SSEEEEEECCSCSSSCCEEEEETSCCGGGEEEEEEEEEEEE----ETTEEEEECCEEETTEECCTTT
T ss_pred HHHHHHHCCCCC-CCEEEEEEeCCCCCCCCeEEEECCcChhhccCceEEEEccc----CCeEEEEeeEEEECCEEecccC
Confidence 33343332 689999998753 3589999999985 5899999987 6799999999999999876543
Q ss_pred ccccCCCEEEcccccCccCCHhHHHHHHHHHHH
Q 012892 322 SVFTTAGTIIDSGTVITRLPPDAYTPLRTAFRQ 354 (454)
Q Consensus 322 ~~~~~~~~iiDSGT~~~~lp~~~~~~l~~~l~~ 354 (454)
.. ..+||||||++++||++++++|.+++++
T Consensus 209 ~~---~~aiiDTGTt~~~lP~~~~~~i~~~iga 238 (239)
T 1b5f_A 209 PG---CQAFADSGTSLLSGPTAIVTQINHAIGA 238 (239)
T ss_dssp TC---EEEEECTTCSSEEECHHHHHHHHHHTTC
T ss_pred CC---CEEEEecCcchhhCCHHHHHHHHHHhCC
Confidence 32 4599999999999999999999998864
No 35
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B*
Probab=100.00 E-value=6.3e-36 Score=282.68 Aligned_cols=215 Identities=21% Similarity=0.335 Sum_probs=170.9
Q ss_pred ccccceeeeeeecCCC-CCC--CcceeeecCCCCCcc------ceehhhh---cCCcEEEecCCCCCC--CceEEeccCC
Q 012892 219 DVFPNFLFGCGQNNRG-LFG--GAAGLMGLGRDPISL------VSQTATK---YKKLFSYCLPSSASS--TGHLTFGPGA 284 (454)
Q Consensus 219 ~~~~~~~FG~~~~~~~-~~~--~~~GilGLg~~~~sl------~~q~~~~---~~~~FS~~L~~~~~~--~G~l~fGg~d 284 (454)
.+++++.|||++...+ .+. ..+||||||++.++. +.|+..+ .+++||+||.+.... .|.|+|||+|
T Consensus 3 ~~v~~~~Fg~~~~~~~~~f~~~~~dGilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~l~~~~~~~~~G~l~fGg~d 82 (241)
T 1lya_B 3 VKVERQVFGEATKQPGITFIAAKFDGILGMAYPRISVNNVLPVFDNLMQQKLVDQNIFSFYLSRDPDAQPGGELMLGGTD 82 (241)
T ss_dssp EEEEEEEEEEEEECCSSTTTSCSSSEEEECSCGGGCGGGCCCHHHHHHHTTCSSSSEEEEEECSSTTCSSCEEEEETSCC
T ss_pred eEECCeEEEEEEEccCCccccccCCEEEECCcchhhccCCChHHHHHHHCCCCCCCEEEEEEeCCCCCCCCcEEEECCcC
Confidence 5788999999998866 343 689999999987663 3344433 169999999987543 8999999998
Q ss_pred C----CCeeeEecccCCCCCccEEEEEeEEEECcEEeeeccccccCCCEEEcccccCccCCHhHHHHHHHHHHHhhhcCC
Q 012892 285 S----KSVQFTPLSSISGGSSFYGLEMIGISVGGQKLSIAASVFTTAGTIIDSGTVITRLPPDAYTPLRTAFRQFMSKYP 360 (454)
Q Consensus 285 ~----~~~~~~pl~~~~~~~~~y~v~l~~i~vg~~~~~~~~~~~~~~~~iiDSGT~~~~lp~~~~~~l~~~l~~~~~~~~ 360 (454)
+ +++.|+|+.. +.+|.|++++|+|+++.+... .. ..+||||||+++++|++++++|.+++++...
T Consensus 83 ~~~~~g~l~~~p~~~----~~~~~v~l~~i~v~~~~~~~~-~~---~~aiiDSGTt~~~lP~~~~~~l~~~~~~~~~--- 151 (241)
T 1lya_B 83 SKYYKGSLSYLNVTR----KAYWQVHLDQVEVASGLTLCK-EG---CEAIVDTGTSLMVGPVDEVRELQKAIGAVPL--- 151 (241)
T ss_dssp GGGEEEEEEEEECSS----BTTBEEEEEEEEETTSCEEST-TC---EEEEECTTCSSEEECHHHHHHHHHHHTCEEE---
T ss_pred HHHcCCceEEEECcc----ccEEEEEEeEEEECCeeEecc-CC---CEEEEECCCccccCCHHHHHHHHHHhCCeec---
Confidence 5 6899999986 689999999999999775322 11 3599999999999999999999999876521
Q ss_pred CCCCCccccccccccCCcccccCeEEEEEcCCcEEEEcCCCcEEEeCC--CeEEE-EEEeCC---CCCCceeechhhhce
Q 012892 361 TAPALSLLDTCYDFSKYSTVTLPQISLFFSGGVEVSVDKTGIMYASNI--SQVCL-AFAGNS---DPTDVSIFGNTQQHT 434 (454)
Q Consensus 361 ~~~~~~~~~~Cy~~~~~~~~~~P~i~~~f~gg~~~~l~~~~~~~~~~~--~~~C~-~~~~~~---~~~~~~IlG~~fl~~ 434 (454)
..+. |.++|.....+|+|+|+| +|++++|++++|+++... +..|+ +|.+.+ ...+.||||++|||+
T Consensus 152 -~~g~------~~~~C~~~~~~p~i~f~f-~g~~~~l~~~~y~~~~~~~~~~~C~~~~~~~~~~~~~~~~~ilG~~fl~~ 223 (241)
T 1lya_B 152 -IQGE------YMIPCEKVSTLPAITLKL-GGKGYKLSPEDYTLKVSQAGKTLCLSGFMGMDIPPPSGPLWILGDVFIGR 223 (241)
T ss_dssp -ETTE------EEEEGGGGGGSCCEEEEE-TTEEEEECTTTSEEEETTTTSSEEEESEEECCCCTTTCCCEEECHHHHTT
T ss_pred -cCCc------EEEECCCCccCCeEEEEE-CCEEEEECHHHhEEEccCCCCCeeEEEEEecccCCCCCCeEEechHHhcc
Confidence 1111 333444445789999999 789999999999998643 46899 587653 134689999999999
Q ss_pred eEEEEECCCCEEEEEeCC
Q 012892 435 LEVVYDVAGGKVGFAAGG 452 (454)
Q Consensus 435 ~~vvfD~~~~rigfa~~~ 452 (454)
+|+|||++++|||||+++
T Consensus 224 ~y~vfD~~~~~igfA~~~ 241 (241)
T 1lya_B 224 YYTVFDRDNNRVGFAEAA 241 (241)
T ss_dssp EEEEEETTTTEEEEEEEC
T ss_pred eEEEEECCCCEEEEEEcC
Confidence 999999999999999874
No 36
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A*
Probab=99.89 E-value=2.6e-23 Score=167.03 Aligned_cols=90 Identities=27% Similarity=0.530 Sum_probs=80.5
Q ss_pred eeccccCCccCcccEEEEEEeCCCCceEEEEEECCCceeeEeCCCcc---ccccCCCCCCCCCCCCCccceecCCCcccc
Q 012892 99 TLPAKDGSVVGAGNYIVTVGIGTPKKDLSLIFDTGSDLTWTQCEPCV---KYCYEQKEPKFDPTVSQSYSNVSCSSTICT 175 (454)
Q Consensus 99 ~~p~~~~~~~~~~~Y~~~i~iGtP~q~~~li~DTGS~~~Wv~~~~C~---~~C~~~~~~~f~ps~SsT~~~~~C~~~~C~ 175 (454)
.+|+. +..+.+|+++|.||||||++.|+|||||+++||+|.+|. ..|..+ +.|||++|+||+...
T Consensus 4 ~~~l~---n~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~~~~~~C~~~--~~y~p~~SsT~~~~~------- 71 (97)
T 1lya_A 4 PEVLK---NYMDAQYYGEIGIGTPPQCFTVVFDTGSSNLWVPSIHCKLLDIACWIH--HKYNSDKSSTYVKNG------- 71 (97)
T ss_dssp EEEEE---EETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCTTCHHHHTS--CCBCGGGCTTCEEEE-------
T ss_pred eEeeE---ECCCCeEEEEEEECCCCeEEEEEEeCCCCceEEeEcCccCcccccCCC--CCCCchhCCCceeCC-------
Confidence 46665 345789999999999999999999999999999999996 369765 899999999999875
Q ss_pred ccccCCCCCCCCCCCCceeeeEeCCCCeEEEeEEEEEEEeCC
Q 012892 176 SLQSATGNSPACASSTCLYGIQYGDSSFSIGFFGKETLTLTP 217 (454)
Q Consensus 176 ~~~~~~~~~~~c~~~~c~~~~~Ygdgs~~~G~~~~Dtv~~~~ 217 (454)
|.|.+.|++|+ +.|.+++|+|+|++
T Consensus 72 ----------------~~~~i~Yg~Gs-~~G~~~~Dtv~i~g 96 (97)
T 1lya_A 72 ----------------TSFDIHYGSGS-LSGYLSQDTVSVPC 96 (97)
T ss_dssp ----------------EEEEEECSSCE-EEEEEEEEEEEESC
T ss_pred ----------------CcEEEEECCcE-EEEEEEEEEEEECC
Confidence 69999999998 89999999999986
No 37
>1b5f_B Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=99.68 E-value=6.9e-17 Score=127.08 Aligned_cols=80 Identities=18% Similarity=0.325 Sum_probs=65.9
Q ss_pred ccccCCcccccCeEEEEEcCCcEEEEcCCCcEEEeCC--CeEEE-EEEeCC--CCCCceeechhhhceeEEEEECCCCEE
Q 012892 372 YDFSKYSTVTLPQISLFFSGGVEVSVDKTGIMYASNI--SQVCL-AFAGNS--DPTDVSIFGNTQQHTLEVVYDVAGGKV 446 (454)
Q Consensus 372 y~~~~~~~~~~P~i~~~f~gg~~~~l~~~~~~~~~~~--~~~C~-~~~~~~--~~~~~~IlG~~fl~~~~vvfD~~~~ri 446 (454)
|.++|.....+|+|+|+| ||++++|++++|+++... +..|+ ++.+.+ ...+.||||+.|||++|+|||++++||
T Consensus 3 y~v~C~~~~~~P~i~f~~-gg~~~~l~~~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~ILGd~Fl~~~y~vfD~~~~ri 81 (87)
T 1b5f_B 3 LQVDCNTLSSMPNVSFTI-GGKKFGLTPEQYILKVGKGEATQCISGFTAMDATLLGPLWILGDVFMRPYHTVFDYGNLLV 81 (87)
T ss_dssp CEECGGGGGGCCCEEEEE-TTEEEEECHHHHEEEESCTTTCEEEESEEECCCBSSSBEEEECHHHHTTEEEEEETTTTEE
T ss_pred EEEECCCCCcCCcEEEEE-CCEEEEECHHHhEEEccCCCCCEEEEEEEECCCCCCCCeEEechHHhccEEEEEECCCCEE
Confidence 344555556799999999 789999999999998643 46899 677653 234589999999999999999999999
Q ss_pred EEEeCC
Q 012892 447 GFAAGG 452 (454)
Q Consensus 447 gfa~~~ 452 (454)
|||+++
T Consensus 82 GfA~~~ 87 (87)
T 1b5f_B 82 GFAEAA 87 (87)
T ss_dssp EEEEEC
T ss_pred EEEEcC
Confidence 999864
No 38
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae}
Probab=92.56 E-value=0.28 Score=41.25 Aligned_cols=108 Identities=9% Similarity=0.096 Sum_probs=59.8
Q ss_pred ccEEEEEeEEEECcEEeeeccccccCCCEEEcccccCccCCHhHHHHHHHHHHHhhhc-CC-CCCCCccccccccccCCc
Q 012892 301 SFYGLEMIGISVGGQKLSIAASVFTTAGTIIDSGTVITRLPPDAYTPLRTAFRQFMSK-YP-TAPALSLLDTCYDFSKYS 378 (454)
Q Consensus 301 ~~y~v~l~~i~vg~~~~~~~~~~~~~~~~iiDSGT~~~~lp~~~~~~l~~~l~~~~~~-~~-~~~~~~~~~~Cy~~~~~~ 378 (454)
+.++|+ +.|+|+.+. ++||||.+.+.++++..+.+--. ..... .. ...+.... .+
T Consensus 25 ~~~~v~---v~InG~~~~----------~LvDTGAs~s~is~~~a~~lgl~--~~~~~~~~~~a~g~g~~-~~------- 81 (148)
T 2i1a_A 25 PMLYIN---IEINNYPVK----------AFVDTGAQTTIMSTRLAKKTGLS--RMIDKRFIGEARGVGTG-KI------- 81 (148)
T ss_dssp CCCEEE---EEETTEEEE----------EEECTTCSSCEEEHHHHHHHTGG--GGCBCCCC-------------------
T ss_pred ceEEEE---EEECCEEEE----------EEEECCCCccccCHHHHHHcCCC--ccCCcceEEEEecCCCc-cc-------
Confidence 345555 678888542 99999999999998877654211 10000 00 00010000 00
Q ss_pred ccccCeEEEEEcCCcEEEEcCCCcEEEeCCCeEEEEEEeCCCCCCceeechhhhceeEEEEECCCCEEEEE
Q 012892 379 TVTLPQISLFFSGGVEVSVDKTGIMYASNISQVCLAFAGNSDPTDVSIFGNTQQHTLEVVYDVAGGKVGFA 449 (454)
Q Consensus 379 ~~~~P~i~~~f~gg~~~~l~~~~~~~~~~~~~~C~~~~~~~~~~~~~IlG~~fl~~~~vvfD~~~~rigfa 449 (454)
........+.+ |+..+.++ +.+.+. +...|||..||+++-+..|.++++|-|.
T Consensus 82 ~~~~~~~~i~i-g~~~~~~~--------------~~vl~~---~~d~iLG~d~L~~~~~~ID~~~~~l~l~ 134 (148)
T 2i1a_A 82 IGRIHQAQVKI-ETQYIPCS--------------FTVLDT---DIDVLIGLDMLKRHLACVDLKENVLRIA 134 (148)
T ss_dssp CEEEEEEEEEE-TTEEEEEE--------------EEEECS---SCSEEECHHHHHHTTCEEETTTTEEEET
T ss_pred ccEEEEEEEEE-CCEEecee--------------EEEecC---CCCeEecHHHHhhCCEEEECCCCEEEEc
Confidence 01122345566 55432211 012221 1247999999999999999999999885
No 39
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens}
Probab=92.15 E-value=0.14 Score=43.28 Aligned_cols=110 Identities=12% Similarity=0.145 Sum_probs=62.4
Q ss_pred cEEEEEeEEEECcEEeeeccccccCCCEEEcccccCccCCHhHHHHHHHHHHHhhhc-CC-CCCCCccccccccccCCcc
Q 012892 302 FYGLEMIGISVGGQKLSIAASVFTTAGTIIDSGTVITRLPPDAYTPLRTAFRQFMSK-YP-TAPALSLLDTCYDFSKYST 379 (454)
Q Consensus 302 ~y~v~l~~i~vg~~~~~~~~~~~~~~~~iiDSGT~~~~lp~~~~~~l~~~l~~~~~~-~~-~~~~~~~~~~Cy~~~~~~~ 379 (454)
.++|+ +.|+|+.+. +++|||.+.+.++.+..+.+-- ...... +. ...+... ..+ .
T Consensus 24 ~l~v~---~~Ing~~v~----------~LVDTGAs~s~Is~~~A~rlGL--~~~~~~~~~~~a~g~G~-~~~-------~ 80 (148)
T 3s8i_A 24 MLYIN---CKVNGHPLK----------AFVDSGAQMTIMSQACAERCNI--MRLVDRRWAGVAKGVGT-QRI-------I 80 (148)
T ss_dssp CCEEE---EEETTEEEE----------EEECTTCSSCEEEHHHHHHTTC--GGGEEGGGCEECCC----CEE-------E
T ss_pred EEEEE---EEECCEEEE----------EEEeCCCCcEeeCHHHHHHcCC--ccccCcceeEEEEcCCc-cEE-------E
Confidence 35555 557887653 9999999999999988876621 100000 00 0000000 000 0
Q ss_pred cccCeEEEEEcCCcEEEEcCCCcEEEeCCCeEEEEEEeCCCCCCceeechhhhceeEEEEECCCCEEEEEeC
Q 012892 380 VTLPQISLFFSGGVEVSVDKTGIMYASNISQVCLAFAGNSDPTDVSIFGNTQQHTLEVVYDVAGGKVGFAAG 451 (454)
Q Consensus 380 ~~~P~i~~~f~gg~~~~l~~~~~~~~~~~~~~C~~~~~~~~~~~~~IlG~~fl~~~~vvfD~~~~rigfa~~ 451 (454)
...+...+++ |+..+ .|-.++-. ......|||..||+.+-.+.|++++++-|...
T Consensus 81 g~v~~~~I~I-g~~~~---------------~~~~~Vle-~~~~d~LLGmD~L~~~~~~ID~~~~~L~l~~~ 135 (148)
T 3s8i_A 81 GRVHLAQIQI-EGDFL---------------QCSFSILE-DQPMDMLLGLDMLRRHQCSIDLKKNVLVIGTT 135 (148)
T ss_dssp EEEEEEEEEE-TTEEE---------------EEEEEEET-TCSSSEEECHHHHHHTTCEEETTTTEEECTTT
T ss_pred EEEEEEEEEE-CCEEE---------------EEEEEEeC-CCCcCeeccHHHHHhCCEEEEcCCCEEEEccC
Confidence 1133455555 44322 13322221 12234799999999999999999999988653
No 40
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae}
Probab=90.64 E-value=0.37 Score=40.45 Aligned_cols=31 Identities=16% Similarity=0.206 Sum_probs=26.8
Q ss_pred CcccEEEEEEeCCCCceEEEEEECCCceeeEeC
Q 012892 109 GAGNYIVTVGIGTPKKDLSLIFDTGSDLTWTQC 141 (454)
Q Consensus 109 ~~~~Y~~~i~iGtP~q~~~li~DTGS~~~Wv~~ 141 (454)
..+.+++++.|+ .+++.+++|||++.+-+.-
T Consensus 23 ~~~~~~v~v~In--G~~~~~LvDTGAs~s~is~ 53 (148)
T 2i1a_A 23 QVPMLYINIEIN--NYPVKAFVDTGAQTTIMST 53 (148)
T ss_dssp CCCCCEEEEEET--TEEEEEEECTTCSSCEEEH
T ss_pred ccceEEEEEEEC--CEEEEEEEECCCCccccCH
Confidence 356789999999 7899999999999988853
No 41
>1fmb_A EIAV protease; hydrolase (acid proteinase), RNA-directed DNA polymerase, AS protease, endonuclease, polyprotein; HET: HYB; 1.80A {Equine infectious anemia virus} SCOP: b.50.1.1 PDB: 2fmb_A*
Probab=82.69 E-value=1.2 Score=35.12 Aligned_cols=26 Identities=27% Similarity=0.373 Sum_probs=23.4
Q ss_pred EEEEEeCCCCceEEEEEECCCceeeEeC
Q 012892 114 IVTVGIGTPKKDLSLIFDTGSDLTWTQC 141 (454)
Q Consensus 114 ~~~i~iGtP~q~~~li~DTGS~~~Wv~~ 141 (454)
++.|.|| .|.+.+++|||.+++-+.-
T Consensus 10 ~v~v~I~--Gq~~e~LLDTGAD~TVl~~ 35 (104)
T 1fmb_A 10 TTIVLIN--DTPLNVLLDTGADTSVLTT 35 (104)
T ss_dssp EEEEEET--TEEEEEEECTTCSSCEEEH
T ss_pred EEEEEEC--CEEEEEEeccCCCcEEEcc
Confidence 5789999 7999999999999999873
No 42
>2hs1_A HIV-1 protease; ultra-high resolution active site surface binding site, HYDR; HET: 017; 0.84A {Human immunodeficiency virus 1} PDB: 3nu4_A* 3tl9_A* 3tkw_A* 3tkg_A* 3ndu_A* 3ndt_A* 3k4v_A* 3a2o_A* 1fgc_C* 2a1e_A* 2aod_A* 2aoi_A* 2aoj_A* 2hb3_A* 2ien_A* 1sdt_A* 2z4o_A* 2zye_A* 2nmw_A* 3b7v_A* ...
Probab=81.81 E-value=1.3 Score=34.42 Aligned_cols=28 Identities=32% Similarity=0.385 Sum_probs=24.2
Q ss_pred EEEEEeCCCCceEEEEEECCCceeeEeCCC
Q 012892 114 IVTVGIGTPKKDLSLIFDTGSDLTWTQCEP 143 (454)
Q Consensus 114 ~~~i~iGtP~q~~~li~DTGS~~~Wv~~~~ 143 (454)
++.|.|| .|.+.+++|||.+++-+.-..
T Consensus 10 ~vtvkI~--Gq~~eaLLDTGAD~TVl~~~~ 37 (99)
T 2hs1_A 10 LVTIKIG--GQLKEALLDTGADDTIIEEMS 37 (99)
T ss_dssp EEEEEET--TEEEEEEECTTCSSEEESCCS
T ss_pred EEEEEEC--CEEEEEEeccCCCcEEEeccc
Confidence 4779999 799999999999999986543
No 43
>3liy_A Protease; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.86A {Human t-lymphotropic virus 1} PDB: 2b7f_A* 3liq_A* 3lit_A* 3liv_A* 3lix_A* 3lin_A*
Probab=77.84 E-value=1.9 Score=34.34 Aligned_cols=31 Identities=19% Similarity=0.383 Sum_probs=25.3
Q ss_pred EEEEEeC---CCCceEEEEEECCCceeeEeCCCc
Q 012892 114 IVTVGIG---TPKKDLSLIFDTGSDLTWTQCEPC 144 (454)
Q Consensus 114 ~~~i~iG---tP~q~~~li~DTGS~~~Wv~~~~C 144 (454)
.+.|.|| +|+|.+..++|||.|++-+....+
T Consensus 12 lvtikI~~~~~~Gq~~eaLLDTGADdTVl~~~~l 45 (116)
T 3liy_A 12 VIKAQVDTQTSHPKTIEALLDTGADMTVIPIALF 45 (116)
T ss_dssp EEEEEEECSSSCCEEEEEEECTTBSSCEEEGGGS
T ss_pred eEEEEEccccCCCeEeEEEeccCCCccEEecccC
Confidence 4566666 789999999999999999976544
No 44
>3ec0_A Protease; HIV-2, inhibitor, hydrolase; HET: GRL; 1.18A {Human immunodeficiency virus type 2} SCOP: b.50.1.1 PDB: 1hii_A* 1hsi_A 1hsh_A* 1idb_A* 1jld_A* 2mip_A 1ida_A* 3ebz_A* 3ecg_A* 3s45_A* 4upj_A* 1ivq_A* 1ivp_A 2hpf_A 3upj_A* 2hpe_A* 5upj_A* 6upj_A* 1sip_A 1tcw_A* ...
Probab=77.68 E-value=2.1 Score=33.32 Aligned_cols=27 Identities=26% Similarity=0.335 Sum_probs=23.7
Q ss_pred EEEEEeCCCCceEEEEEECCCceeeEeCC
Q 012892 114 IVTVGIGTPKKDLSLIFDTGSDLTWTQCE 142 (454)
Q Consensus 114 ~~~i~iGtP~q~~~li~DTGS~~~Wv~~~ 142 (454)
++.+.|| .|.+.+++|||.|++-+...
T Consensus 10 ~vti~I~--Gq~~e~LLDTGAD~TVl~~~ 36 (99)
T 3ec0_A 10 VVTAYIE--GQPVEVLLDTGADDSIVAGI 36 (99)
T ss_dssp EEEEEET--TEEEEEEECTTCSSCEESSC
T ss_pred eEEEEEC--CEEEEEEEecCCCceEEcCc
Confidence 5779999 89999999999999999544
No 45
>2hah_A Protease, retropepsin; retroviral, aspartyl, hydrolase-hydrolase complex; HET: 3TL; 1.70A {Feline immunodeficiency virus} PDB: 3ogp_A* 3ogq_A* 2fiv_A* 6fiv_A* 3fiv_A* 5fiv_A* 4fiv_A* 1fiv_A* 1b11_A*
Probab=73.24 E-value=2.9 Score=33.46 Aligned_cols=23 Identities=22% Similarity=0.388 Sum_probs=21.1
Q ss_pred EEeCCCCceEEEEEECCCceeeEeC
Q 012892 117 VGIGTPKKDLSLIFDTGSDLTWTQC 141 (454)
Q Consensus 117 i~iGtP~q~~~li~DTGS~~~Wv~~ 141 (454)
|.|| .|.+.+++|||.|++-+.-
T Consensus 18 ikI~--Gq~~eaLLDTGAD~TVi~~ 40 (116)
T 2hah_A 18 IFVN--GYPIKFLLDTGADITVLNR 40 (116)
T ss_dssp EEET--TEEEEEEECTTCSSCEEEG
T ss_pred EEEC--CEEEEEEecCCCCcEEEcc
Confidence 8999 7999999999999998864
No 46
>3sqf_A Protease; folded monomer, retropepsin, D-type retrovirus; 1.63A {Mason-pfizer monkey virus} SCOP: b.50.1.1 PDB: 1nso_A
Probab=68.52 E-value=4.9 Score=32.02 Aligned_cols=28 Identities=25% Similarity=0.343 Sum_probs=24.2
Q ss_pred EEEEEeCCCCceEEEEEECCCceeeEeCCC
Q 012892 114 IVTVGIGTPKKDLSLIFDTGSDLTWTQCEP 143 (454)
Q Consensus 114 ~~~i~iGtP~q~~~li~DTGS~~~Wv~~~~ 143 (454)
.+.+.|| .|.+.+++|||.|++-+.-..
T Consensus 11 ~vti~I~--Gq~~eaLLDTGADdTVi~~~~ 38 (114)
T 3sqf_A 11 SLTLWLD--DKMFTGLINTGADVTIIKLED 38 (114)
T ss_dssp EEEEEET--TEEEEEEECTTCSSCEEEGGG
T ss_pred eEEEEEC--CEEEEEEEccCCCceEEeccc
Confidence 5778899 799999999999999997543
No 47
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens}
Probab=62.23 E-value=6.3 Score=32.96 Aligned_cols=31 Identities=13% Similarity=0.221 Sum_probs=26.5
Q ss_pred cccEEEEEEeCCCCceEEEEEECCCceeeEeCC
Q 012892 110 AGNYIVTVGIGTPKKDLSLIFDTGSDLTWTQCE 142 (454)
Q Consensus 110 ~~~Y~~~i~iGtP~q~~~li~DTGS~~~Wv~~~ 142 (454)
...|++++.|. .+++.+++|||++.+.+.-+
T Consensus 22 ~~~l~v~~~In--g~~v~~LVDTGAs~s~Is~~ 52 (148)
T 3s8i_A 22 VTMLYINCKVN--GHPLKAFVDSGAQMTIMSQA 52 (148)
T ss_dssp CCCCEEEEEET--TEEEEEEECTTCSSCEEEHH
T ss_pred cCEEEEEEEEC--CEEEEEEEeCCCCcEeeCHH
Confidence 34688999998 79999999999999988543
No 48
>3slz_A GAG-Pro-POL polyprotein; beta sheet and dimer, protease, peptide inhibitor, TL-3 PEPS virus, hydrolase-hydrolase inhibitor complex; HET: 3TL; 1.40A {Dg-75 murine leukemia virus} PDB: 3nr6_A* 3sm1_A* 3sm2_A* 4exh_A*
Probab=53.05 E-value=12 Score=30.66 Aligned_cols=27 Identities=19% Similarity=0.390 Sum_probs=23.5
Q ss_pred EEEEEeCCCCceEEEEEECCCceeeEeCC
Q 012892 114 IVTVGIGTPKKDLSLIFDTGSDLTWTQCE 142 (454)
Q Consensus 114 ~~~i~iGtP~q~~~li~DTGS~~~Wv~~~ 142 (454)
++.+.|+ .|.+.+++|||.+.+-+.-.
T Consensus 24 ~v~i~I~--G~~~~~LlDTGAd~tVl~~~ 50 (132)
T 3slz_A 24 RITLKVG--GQPVTFLVDTGAQHSVLTQN 50 (132)
T ss_dssp EEEEEET--TEEEEEEECTTCSSCEECSC
T ss_pred EEEEEEC--CEEEEEEEeCCCCeEEEccc
Confidence 5778999 79999999999999988643
No 49
>2rsp_A RSV protease; hydrolase(aspartyl proteinase); 2.00A {Rous sarcoma virus} SCOP: b.50.1.1 PDB: 1mvp_A 1bai_A*
Probab=52.92 E-value=10 Score=30.64 Aligned_cols=23 Identities=22% Similarity=0.323 Sum_probs=19.1
Q ss_pred eCCCCceEEEEEECCCceeeEeCCC
Q 012892 119 IGTPKKDLSLIFDTGSDLTWTQCEP 143 (454)
Q Consensus 119 iGtP~q~~~li~DTGS~~~Wv~~~~ 143 (454)
|| .|.+.+++|||.|++-+....
T Consensus 27 i~--gq~~eaLLDTGAD~TVl~~~~ 49 (124)
T 2rsp_A 27 QR--SVYITALLDSGADITIISEED 49 (124)
T ss_dssp CS--EEEEEEEECTTCSSCEEETTT
T ss_pred CC--CEEEEEEecCCCCcEEEeccc
Confidence 55 577899999999999997654
No 50
>3ka2_A [L-Ala51;Gly51']HIV-1 protease; beta-barrel, hydrolase-hydrolase inhibitor complex; HET: YCM 2NC; 1.40A {Synthetic} PDB: 3fsm_A* 3gi0_A* 2o40_A* 3hzc_A* 3hlo_A* 3iaw_A* 3nxe_A* 3nxn_A* 4epj_A 4ep2_A 4ep3_A 4eq0_A 4eqj_A 1hvc_A* 1g6l_A 2whh_A* 1lv1_A* 3dox_A 3kt5_A 3kt2_A ...
Probab=51.13 E-value=12 Score=32.97 Aligned_cols=26 Identities=35% Similarity=0.426 Sum_probs=23.3
Q ss_pred EEEEEeCCCCceEEEEEECCCceeeEeC
Q 012892 114 IVTVGIGTPKKDLSLIFDTGSDLTWTQC 141 (454)
Q Consensus 114 ~~~i~iGtP~q~~~li~DTGS~~~Wv~~ 141 (454)
.+.|.|| .|.+.+++|||.+++-+..
T Consensus 10 ~vtv~I~--Gq~~e~LLDTGAD~TVl~~ 35 (203)
T 3ka2_A 10 LVTIRIG--GQLKEALLDTGADDTVIEE 35 (203)
T ss_dssp EEEEEET--TEEEEEEECTTCSSCEECS
T ss_pred eEEEEEC--CEEEEEEEecCCCceEEec
Confidence 6789999 7999999999999998853
No 51
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A*
Probab=50.99 E-value=12 Score=28.61 Aligned_cols=40 Identities=25% Similarity=0.351 Sum_probs=26.1
Q ss_pred EecccCCCCCccEEEEEeEEEECcEEeeeccccccCCCEEEcccccCccCCHh
Q 012892 291 TPLSSISGGSSFYGLEMIGISVGGQKLSIAASVFTTAGTIIDSGTVITRLPPD 343 (454)
Q Consensus 291 ~pl~~~~~~~~~y~v~l~~i~vg~~~~~~~~~~~~~~~~iiDSGT~~~~lp~~ 343 (454)
.||... ....|.++ |.||. |+..+. ++||||++.+++|..
T Consensus 5 ~~l~n~--~~~~Y~~~---i~iGT-----P~Q~~~---v~~DTGSs~lWv~~~ 44 (97)
T 1lya_A 5 EVLKNY--MDAQYYGE---IGIGT-----PPQCFT---VVFDTGSSNLWVPSI 44 (97)
T ss_dssp EEEEEE--TTTEEEEE---EEETT-----TTEEEE---EEEETTCCCEEEEBT
T ss_pred EeeEEC--CCCeEEEE---EEECC-----CCeEEE---EEEeCCCCceEEeEc
Confidence 555432 24567664 77773 233333 999999999999864
No 52
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A
Probab=41.92 E-value=23 Score=33.28 Aligned_cols=41 Identities=20% Similarity=0.275 Sum_probs=27.9
Q ss_pred CeeeEecccCCCCCccEEEEEeEEEECcEEeeeccccccCCCEEEcccccCccCCHhH
Q 012892 287 SVQFTPLSSISGGSSFYGLEMIGISVGGQKLSIAASVFTTAGTIIDSGTVITRLPPDA 344 (454)
Q Consensus 287 ~~~~~pl~~~~~~~~~y~v~l~~i~vg~~~~~~~~~~~~~~~~iiDSGT~~~~lp~~~ 344 (454)
.+...|+.. ...|.++ |+||.+++ . ++||||++.+++|..-
T Consensus 5 ~v~~~~~~~----~~~Y~~~---i~iG~Q~~-------~---v~~DTGSs~lWv~~~~ 45 (323)
T 1bxo_A 5 VATNTPTAN----DEEYITP---VTIGGTTL-------N---LNFDTGSADLWVFSTE 45 (323)
T ss_dssp EEEEEECGG----GSCEEEE---EEETTEEE-------E---EEEETTCCCEEECBTT
T ss_pred ceeeeecCC----CCEEEEE---EEECCEEE-------E---EEEeCCCcceEEecCC
Confidence 344455543 5567655 77884443 2 9999999999999753
No 53
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A*
Probab=40.22 E-value=26 Score=33.01 Aligned_cols=41 Identities=24% Similarity=0.284 Sum_probs=27.7
Q ss_pred CeeeEecccCCCCCccEEEEEeEEEECcEEeeeccccccCCCEEEcccccCccCCHhH
Q 012892 287 SVQFTPLSSISGGSSFYGLEMIGISVGGQKLSIAASVFTTAGTIIDSGTVITRLPPDA 344 (454)
Q Consensus 287 ~~~~~pl~~~~~~~~~y~v~l~~i~vg~~~~~~~~~~~~~~~~iiDSGT~~~~lp~~~ 344 (454)
.+...|+.. ...|.++ |+||.+.+ . ++||||++.+++|..-
T Consensus 5 ~v~~~~~~~----~~~Y~~~---i~iG~q~~-------~---v~~DTGSs~lWv~~~~ 45 (323)
T 1izd_A 5 SVTTNPTSN----DEEYITQ---VTVGDDTL-------G---LDFDTGSADLWVFSSQ 45 (323)
T ss_dssp EEEEEECGG----GCCEEEE---EEETTEEE-------E---EEEETTCCCEEECBTT
T ss_pred ceeeeEcCC----CCEEEEE---EEECCEEE-------E---EEEcCCCcceEEecCC
Confidence 344455543 5567655 77884432 2 9999999999999753
No 54
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2
Probab=38.15 E-value=25 Score=33.14 Aligned_cols=32 Identities=22% Similarity=0.237 Sum_probs=23.6
Q ss_pred CccEEEEEeEEEECcEEeeeccccccCCCEEEcccccCccCCHhH
Q 012892 300 SSFYGLEMIGISVGGQKLSIAASVFTTAGTIIDSGTVITRLPPDA 344 (454)
Q Consensus 300 ~~~y~v~l~~i~vg~~~~~~~~~~~~~~~~iiDSGT~~~~lp~~~ 344 (454)
...|.++ |+||.+++ . ++||||++.+++|..-
T Consensus 13 ~~~Y~~~---i~iG~Q~~-------~---v~~DTGSs~lWv~~~~ 44 (325)
T 1ibq_A 13 DEEYLTP---VTVGKSTL-------H---LDFDTGSADLWVFSDE 44 (325)
T ss_dssp TSCEEEE---EEEBTEEE-------E---EEEETTCCCEEEECTT
T ss_pred CCEEEEE---EEECCEEE-------E---EEEeCCCccceEeeCC
Confidence 5667665 77884443 2 9999999999998653
No 55
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A*
Probab=32.77 E-value=44 Score=31.83 Aligned_cols=45 Identities=24% Similarity=0.364 Sum_probs=30.3
Q ss_pred CCeeeEecccCCCCCccEEEEEeEEEECcEEeeeccccccCCCEEEcccccCccCCHh
Q 012892 286 KSVQFTPLSSISGGSSFYGLEMIGISVGGQKLSIAASVFTTAGTIIDSGTVITRLPPD 343 (454)
Q Consensus 286 ~~~~~~pl~~~~~~~~~y~v~l~~i~vg~~~~~~~~~~~~~~~~iiDSGT~~~~lp~~ 343 (454)
+.+...|+... ....|.++ |+||. |+..+. ++||||++.+++|..
T Consensus 5 g~~~~~~l~~~--~~~~Y~~~---i~iGt-----P~q~~~---v~~DTGSs~~Wv~~~ 49 (361)
T 1mpp_A 5 GSVDTPGLYDF--DLEEYAIP---VSIGT-----PGQDFY---LLFDTGSSDTWVPHK 49 (361)
T ss_dssp CCEEEEEEEET--TTTEEEEE---EEETT-----TTEEEE---EEEETTCCCCEEEBT
T ss_pred CccceEEeecC--CCCEEEEE---EEECC-----CCcEEE---EEEcCCCCCeEECCC
Confidence 55666777652 24567665 77883 222233 999999999999864
No 56
>3ka2_A [L-Ala51;Gly51']HIV-1 protease; beta-barrel, hydrolase-hydrolase inhibitor complex; HET: YCM 2NC; 1.40A {Synthetic} PDB: 3fsm_A* 3gi0_A* 2o40_A* 3hzc_A* 3hlo_A* 3iaw_A* 3nxe_A* 3nxn_A* 4epj_A 4ep2_A 4ep3_A 4eq0_A 4eqj_A 1hvc_A* 1g6l_A 2whh_A* 1lv1_A* 3dox_A 3kt5_A 3kt2_A ...
Probab=30.09 E-value=41 Score=29.54 Aligned_cols=27 Identities=33% Similarity=0.375 Sum_probs=23.5
Q ss_pred EEEEEeCCCCceEEEEEECCCceeeEeCC
Q 012892 114 IVTVGIGTPKKDLSLIFDTGSDLTWTQCE 142 (454)
Q Consensus 114 ~~~i~iGtP~q~~~li~DTGS~~~Wv~~~ 142 (454)
.+.+.|| .|.+.+++|||.+++-+...
T Consensus 114 ~~~iki~--Gq~~e~LlDTGAD~TVl~~~ 140 (203)
T 3ka2_A 114 LVTIRIG--GQLKEALLDTGADDTVIEEL 140 (203)
T ss_dssp EEEEEET--TEEEEEEECTTCSSCEECSC
T ss_pred cEEEEEC--CEEEeeeecccCCceeeecc
Confidence 6789999 79999999999999988543
No 57
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A
Probab=29.55 E-value=43 Score=31.36 Aligned_cols=43 Identities=28% Similarity=0.346 Sum_probs=28.2
Q ss_pred eeeEecccCCCCCccEEEEEeEEEECcEEeeeccccccCCCEEEcccccCccCCHh
Q 012892 288 VQFTPLSSISGGSSFYGLEMIGISVGGQKLSIAASVFTTAGTIIDSGTVITRLPPD 343 (454)
Q Consensus 288 ~~~~pl~~~~~~~~~y~v~l~~i~vg~~~~~~~~~~~~~~~~iiDSGT~~~~lp~~ 343 (454)
....|+.... +..|.++ |+||. |+..+. ++||||++.+++|..
T Consensus 3 ~~~~~l~n~~--~~~Y~~~---i~iGt-----P~q~~~---v~~DTGSs~~Wv~~~ 45 (323)
T 3cms_A 3 VASVPLTNYL--DSQYFGK---IYLGT-----PPQEFT---VLFDTGSSDFWVPSI 45 (323)
T ss_dssp CEEEEEEEET--TTEEEEE---EEETT-----TTEEEE---EEEETTCCCEEEEBT
T ss_pred cceeeeEecc--CCEEEEE---EEECC-----CCeEEE---EEEeCCccceEEcCC
Confidence 4456665422 4567665 77874 233333 999999999999864
No 58
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A
Probab=29.28 E-value=54 Score=30.71 Aligned_cols=33 Identities=15% Similarity=0.222 Sum_probs=23.2
Q ss_pred CccEEEEEeEEEECcEEeeeccccccCCCEEEcccccCccCCHh
Q 012892 300 SSFYGLEMIGISVGGQKLSIAASVFTTAGTIIDSGTVITRLPPD 343 (454)
Q Consensus 300 ~~~y~v~l~~i~vg~~~~~~~~~~~~~~~~iiDSGT~~~~lp~~ 343 (454)
...|.++ |+||. |+..+. ++||||++.+++|..
T Consensus 14 ~~~Y~~~---i~iGT-----P~q~~~---v~~DTGSs~lWv~~~ 46 (325)
T 2apr_A 14 DIEYYGQ---VTIGT-----PGKKFN---LDFDTGSSDLWIAST 46 (325)
T ss_dssp TTEEEEE---EEETT-----TTEEEE---EEEETTCCCCEEEBT
T ss_pred CCEEEEE---EEECC-----CCeEEE---EEEcCCCCCEEEccC
Confidence 5567654 77883 222233 999999999999864
No 59
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ...
Probab=27.37 E-value=52 Score=30.88 Aligned_cols=33 Identities=15% Similarity=0.193 Sum_probs=23.4
Q ss_pred CccEEEEEeEEEECcEEeeeccccccCCCEEEcccccCccCCHh
Q 012892 300 SSFYGLEMIGISVGGQKLSIAASVFTTAGTIIDSGTVITRLPPD 343 (454)
Q Consensus 300 ~~~y~v~l~~i~vg~~~~~~~~~~~~~~~~iiDSGT~~~~lp~~ 343 (454)
...|.++ |+||. |+..+. ++||||++.+++|..
T Consensus 14 ~~~Y~~~---i~iGT-----P~Q~~~---v~~DTGSs~lWv~~~ 46 (329)
T 1oew_A 14 DDAYITP---VQIGT-----PAQTLN---LDFDTGSSDLWVFSS 46 (329)
T ss_dssp CCCEEEE---EEETT-----TTEEEE---EEEETTCCCEEECBT
T ss_pred CCEEEEE---EEECC-----CCeEEE---EEECCCCCCeEEecC
Confidence 5567654 77883 222333 999999999999964
No 60
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max}
Probab=26.43 E-value=50 Score=32.05 Aligned_cols=42 Identities=5% Similarity=0.005 Sum_probs=27.8
Q ss_pred eEecccCCCCCccEEEEEeEEEECcEEeeeccccccCCCEEEcccccCccCCHh
Q 012892 290 FTPLSSISGGSSFYGLEMIGISVGGQKLSIAASVFTTAGTIIDSGTVITRLPPD 343 (454)
Q Consensus 290 ~~pl~~~~~~~~~y~v~l~~i~vg~~~~~~~~~~~~~~~~iiDSGT~~~~lp~~ 343 (454)
..|+..+. ....|+++ |+||. |+..+. ++||||++.+|+|..
T Consensus 11 ~~pl~~~~-~~~~Y~~~---i~iGT-----P~Q~~~---v~~DTGSs~lWv~~~ 52 (403)
T 3aup_A 11 VLPVQNDG-STGLHWAN---LQKRT-----PLMQVP---VLVDLNGNHLWVNCE 52 (403)
T ss_dssp EEEEEECT-TTCCEEEE---EEETT-----TTEEEE---EEEETTCSSEEEECS
T ss_pred EEeeecCC-CCceEEEE---EECCC-----CCceeE---EEEECCCCceeECCC
Confidence 36666432 24567665 67774 333343 999999999999854
No 61
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2
Probab=26.23 E-value=62 Score=30.46 Aligned_cols=39 Identities=23% Similarity=0.404 Sum_probs=26.0
Q ss_pred eEecccCCCCCccEEEEEeEEEECcEEeeeccccccCCCEEEcccccCccCCH
Q 012892 290 FTPLSSISGGSSFYGLEMIGISVGGQKLSIAASVFTTAGTIIDSGTVITRLPP 342 (454)
Q Consensus 290 ~~pl~~~~~~~~~y~v~l~~i~vg~~~~~~~~~~~~~~~~iiDSGT~~~~lp~ 342 (454)
.+|+... ...|.++ |+||. |+..+. ++||||++.+++|.
T Consensus 4 ~~~l~n~---~~~Y~~~---i~iGT-----P~q~~~---v~~DTGSs~lWv~~ 42 (340)
T 1wkr_A 4 SVPATNQ---LVDYVVN---VGVGS-----PATTYS---LLVDTGSSNTWLGA 42 (340)
T ss_dssp EEEEEEC---SSCEEEE---EEETT-----TTEEEE---EEEETTCCCCEECS
T ss_pred cEeeecc---CcEEEEE---EEECC-----CCcEEE---EEEeCCChhheecC
Confidence 3555542 3467665 77873 233333 99999999999985
No 62
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A*
Probab=26.05 E-value=57 Score=30.61 Aligned_cols=34 Identities=24% Similarity=0.244 Sum_probs=23.9
Q ss_pred CccEEEEEeEEEECcEEeeeccccccCCCEEEcccccCccCCHhH
Q 012892 300 SSFYGLEMIGISVGGQKLSIAASVFTTAGTIIDSGTVITRLPPDA 344 (454)
Q Consensus 300 ~~~y~v~l~~i~vg~~~~~~~~~~~~~~~~iiDSGT~~~~lp~~~ 344 (454)
...|.++ |+||. |+..+. ++||||++.+++|..-
T Consensus 14 ~~~Y~~~---i~iGT-----P~Q~~~---v~~DTGSs~lWv~~~~ 47 (329)
T 3c9x_A 14 DSEYITS---VSIGT-----PAQVLP---LDFDTGSSDLWVFSSE 47 (329)
T ss_dssp CCCEEEE---EEETT-----TTEEEE---EEEETTCCCEEECBTT
T ss_pred CCEEEEE---EEECC-----CCeEEE---EEEcCCCCCeEEecCC
Confidence 5567654 77883 233333 9999999999999653
No 63
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A
Probab=23.59 E-value=37 Score=33.32 Aligned_cols=44 Identities=14% Similarity=0.098 Sum_probs=30.4
Q ss_pred eeeEecccCCCCCccEEEEEeEEEECcEEeeeccccccCCCEEEcccccCccCCHh
Q 012892 288 VQFTPLSSISGGSSFYGLEMIGISVGGQKLSIAASVFTTAGTIIDSGTVITRLPPD 343 (454)
Q Consensus 288 ~~~~pl~~~~~~~~~y~v~l~~i~vg~~~~~~~~~~~~~~~~iiDSGT~~~~lp~~ 343 (454)
-...|+..+.. ...|+++ |+||. |+..|. ++||||+.++|+|-+
T Consensus 8 ~~~~pv~~d~~-~~~Y~~~---i~iGT-----Ppq~~~---v~~DTGS~~lWv~c~ 51 (413)
T 3vla_A 8 ALVVPVKKDAS-TLQYVTT---INQRT-----PLVSEN---LVVDLGGRFLWVDCD 51 (413)
T ss_dssp EEEEEEEECTT-TCCEEEE---EEETT-----TTEEEE---EEEETTCSSEEEECS
T ss_pred cEEEEeeecCC-CCeEEEE---EEcCC-----CCcceE---EEEeCCChhhhcccC
Confidence 34578877643 5567655 67775 344444 999999999999853
No 64
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2
Probab=22.89 E-value=62 Score=30.40 Aligned_cols=38 Identities=26% Similarity=0.310 Sum_probs=25.5
Q ss_pred EecccCCCCCccEEEEEeEEEECcEEeeeccccccCCCEEEcccccCccCCH
Q 012892 291 TPLSSISGGSSFYGLEMIGISVGGQKLSIAASVFTTAGTIIDSGTVITRLPP 342 (454)
Q Consensus 291 ~pl~~~~~~~~~y~v~l~~i~vg~~~~~~~~~~~~~~~~iiDSGT~~~~lp~ 342 (454)
.|+... ...|.++ |+||. |+..+. ++||||++.+++|.
T Consensus 5 ~~l~~~---~~~Y~~~---i~iGt-----P~q~~~---v~~DTGSs~~Wv~~ 42 (334)
T 1j71_A 5 TTLINE---GPSYAAD---IVVGS-----NQQKQT---VVIDTGSSDLWVVD 42 (334)
T ss_dssp EEEEEC---SSSEEEE---EEETT-----TTEEEE---EEEETTCCCEEEEE
T ss_pred EEEecC---CcEEEEE---EEEcC-----CCcEEE---EEEcCCCCCEEEec
Confidence 455542 4567665 77773 233333 99999999999984
No 65
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} SCOP: b.50.1.0 PDB: 3tne_A*
Probab=22.75 E-value=62 Score=30.36 Aligned_cols=40 Identities=25% Similarity=0.261 Sum_probs=26.3
Q ss_pred eEecccCCCCCccEEEEEeEEEECcEEeeeccccccCCCEEEcccccCccCCHh
Q 012892 290 FTPLSSISGGSSFYGLEMIGISVGGQKLSIAASVFTTAGTIIDSGTVITRLPPD 343 (454)
Q Consensus 290 ~~pl~~~~~~~~~y~v~l~~i~vg~~~~~~~~~~~~~~~~iiDSGT~~~~lp~~ 343 (454)
-+|+.. ...+|.++ |+||. |+..+. ++||||++.+++|..
T Consensus 4 ~~~l~~---~~~~Y~~~---i~iGt-----P~Q~~~---v~~DTGSs~~Wv~~~ 43 (339)
T 3fv3_A 4 SLSLIN---EGPSYASK---VSVGS-----NKQQQT---VIIDTGSSDFWVVDS 43 (339)
T ss_dssp EEEEEE---CSSSEEEE---EEETT-----TTEEEE---EEEETTCCCEEEEEE
T ss_pred eeEEEc---CCCEEEEE---EEEcC-----CCcEEE---EEEeCCCCceEEecC
Confidence 345554 24567765 77773 223333 999999999999843
No 66
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A*
Probab=21.46 E-value=47 Score=31.24 Aligned_cols=31 Identities=19% Similarity=0.295 Sum_probs=22.6
Q ss_pred CccEEEEEeEEEECcEEeeeccccccCCCEEEcccccCccCCHh
Q 012892 300 SSFYGLEMIGISVGGQKLSIAASVFTTAGTIIDSGTVITRLPPD 343 (454)
Q Consensus 300 ~~~y~v~l~~i~vg~~~~~~~~~~~~~~~~iiDSGT~~~~lp~~ 343 (454)
...|.++ |+||.+++ . ++||||++.+++|..
T Consensus 16 ~~~Y~~~---i~iG~Q~~-------~---v~~DTGSs~lWv~~~ 46 (330)
T 1yg9_A 16 NTQYAGI---TKIGNQNF-------L---TVFDSTSCNVVVASQ 46 (330)
T ss_dssp CTTSEEE---EEETTEEE-------E---EEEETTCCCEEEECT
T ss_pred CCEEEEE---EEECCEEE-------E---EEEeCCCcceEEecC
Confidence 3457665 77884443 2 999999999999854
No 67
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans}
Probab=20.79 E-value=82 Score=29.61 Aligned_cols=32 Identities=25% Similarity=0.470 Sum_probs=22.6
Q ss_pred CccEEEEEeEEEECcEEeeeccccccCCCEEEcccccCccCCH
Q 012892 300 SSFYGLEMIGISVGGQKLSIAASVFTTAGTIIDSGTVITRLPP 342 (454)
Q Consensus 300 ~~~y~v~l~~i~vg~~~~~~~~~~~~~~~~iiDSGT~~~~lp~ 342 (454)
...|.++ |+||. |+..+. ++||||++.+++|.
T Consensus 11 ~~~Y~~~---i~iGt-----P~q~~~---v~~DTGSs~~Wv~~ 42 (342)
T 2qzx_A 11 AITYTAD---ITVGS-----DNQKLN---VIVDTGSSDLWIPD 42 (342)
T ss_dssp SSCEEEE---EEETT-----TTEEEE---EEEETTCCCEEEEE
T ss_pred CeEEEEE---EEECC-----CCcEEE---EEEeCCCCCeEEec
Confidence 4567665 77773 233333 99999999999984
No 68
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=20.01 E-value=92 Score=27.63 Aligned_cols=32 Identities=19% Similarity=0.106 Sum_probs=23.7
Q ss_pred ccEEEE---EEeCC-----CCceEEEEEECCCceeeEeCC
Q 012892 111 GNYIVT---VGIGT-----PKKDLSLIFDTGSDLTWTQCE 142 (454)
Q Consensus 111 ~~Y~~~---i~iGt-----P~q~~~li~DTGS~~~Wv~~~ 142 (454)
+.|.++ |.||. +.....+++|||+.+++++.+
T Consensus 188 ~~~~v~l~~i~v~~~~~~~~~~~~~aiiDTGTt~~~lP~~ 227 (239)
T 1b5f_A 188 YYWQFGIGDVLIGDKSTGFCAPGCQAFADSGTSLLSGPTA 227 (239)
T ss_dssp TTEEEEECCEEETTEECCTTTTCEEEEECTTCSSEEECHH
T ss_pred CeEEEEeeEEEECCEEecccCCCCEEEEecCcchhhCCHH
Confidence 466665 57775 234578999999999999754
Done!