BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 012893
(454 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3HBF|A Chain A, Structure Of Ugt78g1 Complexed With Myricetin And Udp
pdb|3HBJ|A Chain A, Structure Of Ugt78g1 Complexed With Udp
Length = 454
Score = 449 bits (1154), Expect = e-126, Method: Compositional matrix adjust.
Identities = 230/442 (52%), Positives = 305/442 (69%), Gaps = 6/442 (1%)
Query: 12 HVAVLAFPFGTHAAPLLDLVRRLSEAALEEEVTFSFFSTAQSNGSLFMEKDELRDCKIVP 71
HVAVLAFPFGTHAAPLL LV++++ A +VTFSFF T +N +LF +E I
Sbjct: 15 HVAVLAFPFGTHAAPLLSLVKKIATEA--PKVTFSFFCTTTTNDTLFSRSNEFLP-NIKY 71
Query: 72 YNVESGLPEGFRFTGNPREPVEHFLKATPGNFVRALEKAVAKTGLEISCLITDAFLWFAA 131
YNV GLP+G+ +GNPREP+ F+KA NF +++AVA+TG I+CL+TDAF WF A
Sbjct: 72 YNVHDGLPKGYVSSGNPREPIFLFIKAMQENFKHVIDEAVAETGKNITCLVTDAFFWFGA 131
Query: 132 EMAEEMRVPWIAYWTAGPRSLLAHVDSDIIREIIGVNGPEN-QTLESIPGFSSIRAKDLP 190
++AEEM W+ WTAGP SLL HV +D+IRE G + ++++ +PGF ++A DLP
Sbjct: 132 DLAEEMHAKWVPLWTAGPHSLLTHVYTDLIREKTGSKEVHDVKSIDVLPGFPELKASDLP 191
Query: 191 EGIISGPLDSPFPIMLDKMGKTLPKATVVAINSYEELDPIVVETLKSRFRKFLNVGPSTL 250
EG+I +D PF ML KMG LP+A VAINS+ + P++ L S+F+ LNVGP L
Sbjct: 192 EGVIKD-IDVPFATMLHKMGLELPRANAVAINSFATIHPLIENELNSKFKLLLNVGPFNL 250
Query: 251 TSPP-PVSDPHGCLPWLNEHENASVIYISFGSMITPPRXXXXXXXXXXXXXGFPFLWSFR 309
T+P VSD HGCL WL++HEN+SV+YISFGS++TPP GFPF+WSFR
Sbjct: 251 TTPQRKVSDEHGCLEWLDQHENSSVVYISFGSVVTPPPHELTALAESLEECGFPFIWSFR 310
Query: 310 GNAEEQLPKGFLERTKSYGKVVPWAPQLKILEHSSVCVFVTHCGWNSTIEGITGGVPMVC 369
G+ +E+LPKGFLERTK+ GK+V WAPQ++IL+HSSV VF+TH GWNS +E I GGVPM+
Sbjct: 311 GDPKEKLPKGFLERTKTKGKIVAWAPQVEILKHSSVGVFLTHSGWNSVLECIVGGVPMIS 370
Query: 370 RPVFADQALNQRIIETAWGIGVGVXGEKFTKDETVNALKQVLSSEEGKRMRENVGALKKL 429
RP F DQ LN + E+ IGVGV TK+ AL+ +SSE+G MR+ + LK+
Sbjct: 371 RPFFGDQGLNTILTESVLEIGVGVDNGVLTKESIKKALELTMSSEKGGIMRQKIVKLKES 430
Query: 430 AFKAVESDGSSTKNFKALVEVV 451
AFKAVE +G+S +F L+++V
Sbjct: 431 AFKAVEQNGTSAMDFTTLIQIV 452
>pdb|2C1X|A Chain A, Structure And Activity Of A Flavonoid 3-O
Glucosyltransferase Reveals The Basis For Plant Natural
Product Modification
pdb|2C1Z|A Chain A, Structure And Activity Of A Flavonoid 3-O
Glucosyltransferase Reveals The Basis For Plant Natural
Product Modification
pdb|2C9Z|A Chain A, Structure And Activity Of A Flavonoid 3-0
Glucosyltransferase Reveals The Basis For Plant Natural
Product Modification
Length = 456
Score = 439 bits (1128), Expect = e-123, Method: Compositional matrix adjust.
Identities = 224/450 (49%), Positives = 293/450 (65%), Gaps = 6/450 (1%)
Query: 7 STQRRHVAVLAFPFGTHAAPLLDLVRRLSEAALEEEVTFSFFSTAQSNGSLFMEKDELRD 66
+T HVAVLAFPF THAAPLL AA FSFFST+QSN S+F +
Sbjct: 4 TTTNPHVAVLAFPFSTHAAPLL--AVVRRLAAAAPHAVFSFFSTSQSNASIFHDSMHTMQ 61
Query: 67 CKIVPYNVESGLPEGFRFTGNPREPVEHFLKATPGNFVRALEKAVAKTGLEISCLITDAF 126
C I Y++ G+PEG+ F G P+E +E F +A P +F + + AVA+TG +SCL+ DAF
Sbjct: 62 CNIKSYDISDGVPEGYVFAGRPQEDIELFTRAAPESFRQGMVMAVAETGRPVSCLVADAF 121
Query: 127 LWFAAEMAEEMRVPWIAYWTAGPRSLLAHVDSDIIREIIGVNG---PENQTLESIPGFSS 183
+WFAA+MA EM V W+ +WTAGP SL HV D IRE IGV+G E++ L IPG S
Sbjct: 122 IWFAADMAAEMGVAWLPFWTAGPNSLSTHVYIDEIREKIGVSGIQGREDELLNFIPGMSK 181
Query: 184 IRAKDLPEGIISGPLDSPFPIMLDKMGKTLPKATVVAINSYEELDPIVVETLKSRFRKFL 243
+R +DL EGI+ G L+S F ML +MG+ LPKAT V INS+EELD + LKS+ + +L
Sbjct: 182 VRFRDLQEGIVFGNLNSLFSRMLHRMGQVLPKATAVFINSFEELDDSLTNDLKSKLKTYL 241
Query: 244 NVGPSTLTSPPPV-SDPHGCLPWLNEHENASVIYISFGSMITPPRXXXXXXXXXXXXXGF 302
N+GP L +PPPV + GCL WL E + SV+YISFG++ TPP
Sbjct: 242 NIGPFNLITPPPVVPNTTGCLQWLKERKPTSVVYISFGTVTTPPPAEVVALSEALEASRV 301
Query: 303 PFLWSFRGNAEEQLPKGFLERTKSYGKVVPWAPQLKILEHSSVCVFVTHCGWNSTIEGIT 362
PF+WS R A LP+GFLE+T+ YG VVPWAPQ ++L H +V FVTHCGWNS E +
Sbjct: 302 PFIWSLRDKARVHLPEGFLEKTRGYGMVVPWAPQAEVLAHEAVGAFVTHCGWNSLWESVA 361
Query: 363 GGVPMVCRPVFADQALNQRIIETAWGIGVGVXGEKFTKDETVNALKQVLSSEEGKRMREN 422
GGVP++CRP F DQ LN R++E IGV + G FTK ++ Q+LS E+GK++REN
Sbjct: 362 GGVPLICRPFFGDQRLNGRMVEDVLEIGVRIEGGVFTKSGLMSCFDQILSQEKGKKLREN 421
Query: 423 VGALKKLAFKAVESDGSSTKNFKALVEVVN 452
+ AL++ A +AV GSST+NF LV++V+
Sbjct: 422 LRALRETADRAVGPKGSSTENFITLVDLVS 451
>pdb|2PQ6|A Chain A, Crystal Structure Of Medicago Truncatula Ugt85h2- Insights
Into The Structural Basis Of A Multifunctional (Iso)
Flavonoid Glycosyltransferase
Length = 482
Score = 166 bits (421), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 128/484 (26%), Positives = 214/484 (44%), Gaps = 50/484 (10%)
Query: 7 STQRRHVAVLAFPFGTHAAPLLDLVRRLSEAALEEEVTFSFFSTAQSNGSLFMEKDELRD 66
+ ++ HV ++ +P H PL L + L +F +T ++ L +
Sbjct: 5 ANRKPHVVMIPYPVQGHINPLFKLAKLLHLRGFH----ITFVNTEYNHKRLLKSRGPKAF 60
Query: 67 CKIVPYNVESGLPEGF---RFTGNPREPVEHFLKATPGNFVRALEKAVAKTGLE-----I 118
+N ES +P+G G+ + V ++ NF++ + + + +
Sbjct: 61 DGFTDFNFES-IPDGLTPMEGDGDVSQDVPTLCQSVRKNFLKPYCELLTRLNHSTNVPPV 119
Query: 119 SCLITDAFLWFAAEMAEEMRVPWIAYWTAGPRSLL--AHVDSDIIREIIG-------VNG 169
+CL++D + F + AEE +P + Y+++ SLL H S + R II NG
Sbjct: 120 TCLVSDCCMSFTIQAAEEFELPNVLYFSSSACSLLNVMHFRSFVERGIIPFKDESYLTNG 179
Query: 170 PENQTLESIPGFSSIRAKDLPEGIISGPLDSPFPIMLD---KMGKTLPKATVVAINSYEE 226
++ IPG + R KD+ + I + +P IML+ ++ + K T + +N++ E
Sbjct: 180 CLETKVDWIPGLKNFRLKDIVDFIRTT---NPNDIMLEFFIEVADRVNKDTTILLNTFNE 236
Query: 227 LDPIVVETLKSRFRKFLNVGP--STLTSPPPV-----------SDPHGCLPWLNEHENAS 273
L+ V+ L S +GP S L P + + CL WL E S
Sbjct: 237 LESDVINALSSTIPSIYPIGPLPSLLKQTPQIHQLDSLDSNLWKEDTECLDWLESKEPGS 296
Query: 274 VIYISFGS--MITPPRXXXXXXXXXXXXXGFPFLWSFRGN----AEEQLPKGFLERTKSY 327
V+Y++FGS ++TP + F LW R + F
Sbjct: 297 VVYVNFGSTTVMTPEQLLEFAWGLANCKKSF--LWIIRPDLVIGGSVIFSSEFTNEIADR 354
Query: 328 GKVVPWAPQLKILEHSSVCVFVTHCGWNSTIEGITGGVPMVCRPVFADQALNQRIIETAW 387
G + W PQ K+L H S+ F+THCGWNST E I GVPM+C P FADQ + R I W
Sbjct: 355 GLIASWCPQDKVLNHPSIGGFLTHCGWNSTTESICAGVPMLCWPFFADQPTDCRFICNEW 414
Query: 388 GIGVGVXGEKFTKDETVNALKQVLSSEEGKRMRENVGALKKLAFKAVESDGSSTKNFKAL 447
IG+ + ++E + +V++ ++GK+M++ LKK A + G S N +
Sbjct: 415 EIGMEI-DTNVKREELAKLINEVIAGDKGKKMKQKAMELKKKAEENTRPGGCSYMNLNKV 473
Query: 448 VEVV 451
++ V
Sbjct: 474 IKDV 477
>pdb|2VCE|A Chain A, Characterization And Engineering Of The Bifunctional N-
And O-glucosyltransferase Involved In Xenobiotic
Metabolism In Plants
pdb|2VCH|A Chain A, Characterization And Engineering Of The Bifunctional N-
And O-Glucosyltransferase Involved In Xenobiotic
Metabolism In Plants
pdb|2VG8|A Chain A, Characterization And Engineering Of The Bifunctional N-
And O-Glucosyltransferase Involved In Xenobiotic
Metabolism In Plants
Length = 480
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 100/356 (28%), Positives = 158/356 (44%), Gaps = 41/356 (11%)
Query: 119 SCLITDAFLWFAAEMAEEMRVPWIAYW--TAGPRSLLAHVDSDIIREIIGVNGPENQTLE 176
+ L+ D F A ++A E VP ++ TA S H+ + E + E
Sbjct: 112 TALVVDLFGTDAFDVAVEFHVPPYIFYPTTANVLSFFLHLPK--LDETVSCEFRELTEPL 169
Query: 177 SIPGFSSIRAKDLPEGIISGPLDSPFPIMLDKMGKTLPKATVVAINSYEELDPIVVETLK 236
+PG + KD + D + +L K +A + +N++ EL+P ++ L+
Sbjct: 170 MLPGCVPVAGKDFLDPA-QDRKDDAYKWLLHNT-KRYKEAEGILVNTFFELEPNAIKALQ 227
Query: 237 SR---------FRKFLNVGPSTLTSPPPVSDPHGCLPWLNEHENASVIYISFGSMITPPR 287
+N+G ++ CL WL+ SV+Y+SFGS T
Sbjct: 228 EPGLDKPPVYPVGPLVNIGKQEAKQ----TEESECLKWLDNQPLGSVLYVSFGSGGTLTC 283
Query: 288 XXXXXXXXXXXXXGFPFLWSFRG----------NAEEQ------LPKGFLERTKSYGKVV 331
FLW R ++ Q LP GFLERTK G V+
Sbjct: 284 EQLNELALGLADSEQRFLWVIRSPSGIANSSYFDSHSQTDPLTFLPPGFLERTKKRGFVI 343
Query: 332 P-WAPQLKILEHSSVCVFVTHCGWNSTIEGITGGVPMVCRPVFADQALNQRI----IETA 386
P WAPQ ++L H S F+THCGWNST+E + G+P++ P++A+Q +N + I A
Sbjct: 344 PFWAPQAQVLAHPSTGGFLTHCGWNSTLESVVSGIPLIAWPLYAEQKMNAVLLSEDIRAA 403
Query: 387 WGIGVGVXGEKFTKDETVNALKQVLSSEEGKRMRENVGALKKLAFKAVESDGSSTK 442
G G ++E +K ++ EEGK +R + LK+ A + ++ DG+STK
Sbjct: 404 LRPRAGDDG-LVRREEVARVVKGLMEGEEGKGVRNKMKELKEAACRVLKDDGTSTK 458
>pdb|2ACV|A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1
pdb|2ACV|B Chain B, Crystal Structure Of Medicago Truncatula Ugt71g1
Length = 463
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 100/364 (27%), Positives = 177/364 (48%), Gaps = 31/364 (8%)
Query: 109 KAVAKTGL--EISCLITDAFLWFAAEMAEEMRVPWIAYWTA--GPRSLLAHVDSDIIREI 164
KA KT L ++ L+ D F ++ E +P + T+ G SL+ + + I E+
Sbjct: 104 KATIKTILSNKVVGLVLDFFCVSMIDVGNEFGIPSYLFLTSNVGFLSLMLSLKNRQIEEV 163
Query: 165 IGVNGPENQTLESIPGFSS-IRAKDLPEGIISGPLDSPFPIMLDKMGKTLPKATVVAINS 223
+ ++Q L +IPG S+ + + LP+ + D + I K+ + + +N+
Sbjct: 164 FDDSDRDHQLL-NIPGISNQVPSNVLPDACFNK--DGGY-IAYYKLAERFRDTKGIIVNT 219
Query: 224 YEELDPIVVETLKSRFRKF---LNVGP--STLTSPPPVSDPHG---CLPWLNEHENASVI 275
+ +L+ ++ L K VGP P P D L WL+E + SV+
Sbjct: 220 FSDLEQSSIDALYDHDEKIPPIYAVGPLLDLKGQPNPKLDQAQHDLILKWLDEQPDKSVV 279
Query: 276 YISFGSM-ITPPRXXXXXXXXXXXXXGFPFLWSFRGNAEEQL-PKGFLERTKSYGK--VV 331
++ FGSM ++ G FLWS +AE+++ P+GFLE + GK +
Sbjct: 280 FLCFGSMGVSFGPSQIREIALGLKHSGVRFLWS--NSAEKKVFPEGFLEWMELEGKGMIC 337
Query: 332 PWAPQLKILEHSSVCVFVTHCGWNSTIEGITGGVPMVCRPVFADQALNQRIIETAWGIGV 391
WAPQ+++L H ++ FV+HCGWNS +E + GVP++ P++A+Q LN + WG+G+
Sbjct: 338 GWAPQVEVLAHKAIGGFVSHCGWNSILESMWFGVPILTWPIYAEQQLNAFRLVKEWGVGL 397
Query: 392 GVXGEKFTKDETVNA------LKQVLSSEEGKRMRENVGALKKLAFKAVESDGSSTKNFK 445
G+ + + V A LK ++ + + + V +K+++ AV GSS +
Sbjct: 398 GLRVDYRKGSDVVAAEEIEKGLKDLMDKD--SIVHKKVQEMKEMSRNAVVDGGSSLISVG 455
Query: 446 ALVE 449
L++
Sbjct: 456 KLID 459
>pdb|2ACW|A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 Complexed
With Udp-Glucose
pdb|2ACW|B Chain B, Crystal Structure Of Medicago Truncatula Ugt71g1 Complexed
With Udp-Glucose
Length = 465
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 99/364 (27%), Positives = 177/364 (48%), Gaps = 31/364 (8%)
Query: 109 KAVAKTGL--EISCLITDAFLWFAAEMAEEMRVPWIAYWTA--GPRSLLAHVDSDIIREI 164
KA KT L ++ L+ D F ++ E +P + T+ G SL+ + + I E+
Sbjct: 104 KATIKTILSNKVVGLVLDFFCVSMIDVGNEFGIPSYLFLTSNVGFLSLMLSLKNRQIEEV 163
Query: 165 IGVNGPENQTLESIPGFSS-IRAKDLPEGIISGPLDSPFPIMLDKMGKTLPKATVVAINS 223
+ ++Q L +IPG S+ + + LP+ + D + I K+ + + +N+
Sbjct: 164 FDDSDRDHQLL-NIPGISNQVPSNVLPDACFNK--DGGY-IAYYKLAERFRDTKGIIVNT 219
Query: 224 YEELDPIVVETLKSRFRKF---LNVGP--STLTSPPPVSDPHG---CLPWLNEHENASVI 275
+ +L+ ++ L K VGP P P D L WL+E + SV+
Sbjct: 220 FSDLEQSSIDALYDHDEKIPPIYAVGPLLDLKGQPNPKLDQAQHDLILKWLDEQPDKSVV 279
Query: 276 YISFGSM-ITPPRXXXXXXXXXXXXXGFPFLWSFRGNAEEQL-PKGFLERTKSYGK--VV 331
++ FGSM ++ G FLWS +AE+++ P+GFLE + GK +
Sbjct: 280 FLCFGSMGVSFGPSQIREIALGLKHSGVRFLWS--NSAEKKVFPEGFLEWMELEGKGMIC 337
Query: 332 PWAPQLKILEHSSVCVFVTHCGWNSTIEGITGGVPMVCRPVFADQALNQRIIETAWGIGV 391
WAPQ+++L H ++ FV+HCGWNS +E + GVP++ P++A+Q LN + WG+G+
Sbjct: 338 GWAPQVEVLAHKAIGGFVSHCGWNSILESMWFGVPILTWPIYAEQQLNAFRLVKEWGVGL 397
Query: 392 GVX------GEKFTKDETVNALKQVLSSEEGKRMRENVGALKKLAFKAVESDGSSTKNFK 445
G+ + +E LK ++ ++ + + V +K+++ AV GSS +
Sbjct: 398 GLRVDYRKGSDVVAAEEIEKGLKDLM--DKDSIVHKKVQEMKEMSRNAVVDGGSSLISVG 455
Query: 446 ALVE 449
L++
Sbjct: 456 KLID 459
>pdb|2O6L|A Chain A, Crystal Structure Of The Udp-Glucuronic Acid Binding
Domain Of The Human Drug Metabolizing
Udp-Glucuronosyltransferase 2b7
pdb|2O6L|B Chain B, Crystal Structure Of The Udp-Glucuronic Acid Binding
Domain Of The Human Drug Metabolizing
Udp-Glucuronosyltransferase 2b7
Length = 170
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 58/125 (46%), Gaps = 12/125 (9%)
Query: 305 LWSFRGNAEEQLPKGFLERTKSYGKVVPWAPQLKILEHSSVCVFVTHCGWNSTIEGITGG 364
LW F GN + L G R + W PQ +L H F+TH G N E I G
Sbjct: 55 LWRFDGNKPDTL--GLNTR------LYKWIPQNDLLGHPKTRAFITHGGANGIYEAIYHG 106
Query: 365 VPMVCRPVFADQALNQRIIETAWGIGVGVXGEKFTKDETVNALKQVLSSEEGKRMRENVG 424
+P V P+FADQ N + A G V V + + +NALK+V++ +ENV
Sbjct: 107 IPXVGIPLFADQPDNIAHXK-ARGAAVRVDFNTXSSTDLLNALKRVINDPS---YKENVX 162
Query: 425 ALKKL 429
L ++
Sbjct: 163 KLSRI 167
>pdb|2IYA|A Chain A, The Crystal Structure Of Macrolide Glycosyltransferases: A
Blueprint For Antibiotic Engineering
pdb|2IYA|B Chain B, The Crystal Structure Of Macrolide Glycosyltransferases: A
Blueprint For Antibiotic Engineering
Length = 424
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 49/86 (56%), Gaps = 5/86 (5%)
Query: 329 KVVPWAPQLKILEHSSVCVFVTHCGWNSTIEGITGGVPMVCRPVFADQALN-QRIIETAW 387
+V W PQL IL +S F+TH G ST+E ++ VPMV P A+Q +N +RI+E
Sbjct: 308 EVHQWVPQLDILTKASA--FITHAGMGSTMEALSNAVPMVAVPQIAEQTMNAERIVEL-- 363
Query: 388 GIGVGVXGEKFTKDETVNALKQVLSS 413
G+G + ++ T ++ A+ V S
Sbjct: 364 GLGRHIPRDQVTAEKLREAVLAVASD 389
>pdb|2IYF|A Chain A, The Crystal Structure Of Macrolide Glycosyltransferases: A
Blueprint For Antibiotic Engineering
pdb|2IYF|B Chain B, The Crystal Structure Of Macrolide Glycosyltransferases: A
Blueprint For Antibiotic Engineering
Length = 430
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 48/97 (49%), Gaps = 12/97 (12%)
Query: 329 KVVPWAPQLKILEHSSVCVFVTHCGWNSTIEGITGGVPMVCRPVFADQALNQRIIETAWG 388
+V W PQL IL + + FVTH G + EG+ PM+ P DQ N +++
Sbjct: 286 EVHDWVPQLAILRQADL--FVTHAGAGGSQEGLATATPMIAVPQAVDQFGNADMLQ---- 339
Query: 389 IGVGVXGEKFTKDETVNALKQ-----VLSSEEGKRMR 420
G+GV + T++ T + L++ V E +R+R
Sbjct: 340 -GLGVARKLATEEATADLLRETALALVDDPEVARRLR 375
>pdb|3RSC|A Chain A, Crystal Structure Of Calg2, Calicheamicin
Glycosyltransferase, Tdp And Calicheamicin T0 Bound Form
pdb|3RSC|B Chain B, Crystal Structure Of Calg2, Calicheamicin
Glycosyltransferase, Tdp And Calicheamicin T0 Bound Form
Length = 415
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 37/70 (52%), Gaps = 5/70 (7%)
Query: 333 WAPQLKILEHSSVCVFVTHCGWNSTIEGITGGVPMVCRP-VFADQALNQRIIETAWGIGV 391
W P +K+LE ++VC VTH G + E + G P+V P F Q +R+ + G+G
Sbjct: 304 WVPHVKVLEQATVC--VTHGGXGTLXEALYWGRPLVVVPQSFDVQPXARRVDQL--GLGA 359
Query: 392 GVXGEKFTKD 401
+ GEK D
Sbjct: 360 VLPGEKADGD 369
>pdb|3IAA|A Chain A, Crystal Structure Of Calg2, Calicheamicin
Glycosyltransferase, Tdp Bound Form
pdb|3IAA|B Chain B, Crystal Structure Of Calg2, Calicheamicin
Glycosyltransferase, Tdp Bound Form
Length = 416
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 37/70 (52%), Gaps = 5/70 (7%)
Query: 333 WAPQLKILEHSSVCVFVTHCGWNSTIEGITGGVPMVCRP-VFADQALNQRIIETAWGIGV 391
W P +K+LE ++VC VTH G + E + G P+V P F Q +R+ + G+G
Sbjct: 304 WVPHVKVLEQATVC--VTHGGXGTLXEALYWGRPLVVVPQSFDVQPXARRVDQL--GLGA 359
Query: 392 GVXGEKFTKD 401
+ GEK D
Sbjct: 360 VLPGEKADGD 369
>pdb|3IA7|A Chain A, Crystal Structure Of Calg4, The Calicheamicin
Glycosyltransferase
pdb|3IA7|B Chain B, Crystal Structure Of Calg4, The Calicheamicin
Glycosyltransferase
Length = 402
Score = 37.4 bits (85), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 4/58 (6%)
Query: 333 WAPQLKILEHSSVCVFVTHCGWNSTIEGITGGVPMVCRPVFADQAL--NQRIIETAWG 388
W P +L H+ C+ TH + +E GVP+V P FA +A +R+IE G
Sbjct: 288 WIPFHSVLAHARACL--THGTTGAVLEAFAAGVPLVLVPHFATEAAPSAERVIELGLG 343
>pdb|4G2T|A Chain A, Crystal Structure Of Streptomyces Sp. Sf2575
Glycosyltransferase Ssfs6, Complexed With Thymidine
Diphosphate
Length = 397
Score = 30.8 bits (68), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Query: 347 VFVTHCGWNSTIEGITGGVPMVCRPVFADQALNQRIIETAWGIGVGVXGEKFTKDETVNA 406
V V H G +T+ ++ GVP V PV A+ + R++ A G GV V E+ + + A
Sbjct: 302 VVVHHGGHGTTLTCLSEGVPQVSVPVIAEVWDSARLLHAA-GAGVEVPWEQAGVESVLAA 360
Query: 407 LKQV 410
++
Sbjct: 361 CARI 364
>pdb|4FZR|A Chain A, Crystal Structure Of Ssfs6, Streptomyces Sp. Sf2575
Glycosyltransferase
Length = 398
Score = 30.8 bits (68), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Query: 347 VFVTHCGWNSTIEGITGGVPMVCRPVFADQALNQRIIETAWGIGVGVXGEKFTKDETVNA 406
V V H G +T+ ++ GVP V PV A+ + R++ A G GV V E+ + + A
Sbjct: 303 VVVHHGGHGTTLTCLSEGVPQVSVPVIAEVWDSARLLHAA-GAGVEVPWEQAGVESVLAA 361
Query: 407 LKQV 410
++
Sbjct: 362 CARI 365
>pdb|3OTG|A Chain A, Crystal Structure Of Calg1, Calicheamicin
Glycostyltransferase, Tdp Bound Form
pdb|3OTH|A Chain A, Crystal Structure Of Calg1, Calicheamicin
Glycostyltransferase, Tdp And Calicheamicin Alpha3i
Bound Form
pdb|3OTH|B Chain B, Crystal Structure Of Calg1, Calicheamicin
Glycostyltransferase, Tdp And Calicheamicin Alpha3i
Bound Form
Length = 412
Score = 29.6 bits (65), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
Query: 333 WAPQLKILEHSSVCVFVTHCGWNSTIEGITGGVPMVCRPVFAD 375
W PQ +L H V + V H G +T+ + GVP + P D
Sbjct: 299 WVPQAALLPH--VDLVVHHGGSGTTLGALGAGVPQLSFPWAGD 339
>pdb|3POP|A Chain A, The Crystal Structure Of Gilr, An Oxidoreductase That
Catalyzes The Terminal Step Of Gilvocarcin Biosynthesis
pdb|3POP|B Chain B, The Crystal Structure Of Gilr, An Oxidoreductase That
Catalyzes The Terminal Step Of Gilvocarcin Biosynthesis
pdb|3POP|C Chain C, The Crystal Structure Of Gilr, An Oxidoreductase That
Catalyzes The Terminal Step Of Gilvocarcin Biosynthesis
pdb|3POP|D Chain D, The Crystal Structure Of Gilr, An Oxidoreductase That
Catalyzes The Terminal Step Of Gilvocarcin Biosynthesis
pdb|3PQB|A Chain A, The Crystal Structure Of Pregilvocarcin In Complex With
Gilr, An Oxidoreductase That Catalyzes The Terminal Step
Of Gilvocarcin Biosynthesis
pdb|3PQB|B Chain B, The Crystal Structure Of Pregilvocarcin In Complex With
Gilr, An Oxidoreductase That Catalyzes The Terminal Step
Of Gilvocarcin Biosynthesis
pdb|3PQB|C Chain C, The Crystal Structure Of Pregilvocarcin In Complex With
Gilr, An Oxidoreductase That Catalyzes The Terminal Step
Of Gilvocarcin Biosynthesis
pdb|3PQB|D Chain D, The Crystal Structure Of Pregilvocarcin In Complex With
Gilr, An Oxidoreductase That Catalyzes The Terminal Step
Of Gilvocarcin Biosynthesis
Length = 501
Score = 29.6 bits (65), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 4/50 (8%)
Query: 71 PYNVESGLPEGFRFTGNPREPVEHFLKATPGNFVRALEKAVAKTGLEISC 120
P +E + RF EP E FL ATP + V +L+KAV + G ++C
Sbjct: 18 PRYIELSHSDNHRFV---VEPEEFFLPATPDDVVASLQKAVTE-GRGVAC 63
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.135 0.407
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,212,317
Number of Sequences: 62578
Number of extensions: 539279
Number of successful extensions: 1250
Number of sequences better than 100.0: 16
Number of HSP's better than 100.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 1217
Number of HSP's gapped (non-prelim): 18
length of query: 454
length of database: 14,973,337
effective HSP length: 102
effective length of query: 352
effective length of database: 8,590,381
effective search space: 3023814112
effective search space used: 3023814112
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 53 (25.0 bits)