Query 012893
Match_columns 454
No_of_seqs 126 out of 1485
Neff 9.7
Searched_HMMs 29240
Date Mon Mar 25 18:16:31 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012893.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/012893hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hbf_A Flavonoid 3-O-glucosylt 100.0 3.4E-70 1.2E-74 542.1 38.4 442 7-452 10-453 (454)
2 2c1x_A UDP-glucose flavonoid 3 100.0 1.8E-64 6.2E-69 505.9 39.9 443 8-452 5-451 (456)
3 2pq6_A UDP-glucuronosyl/UDP-gl 100.0 1.7E-62 5.7E-67 496.3 35.7 443 1-452 1-478 (482)
4 2vch_A Hydroquinone glucosyltr 100.0 6.2E-60 2.1E-64 476.1 43.3 431 8-452 4-468 (480)
5 2acv_A Triterpene UDP-glucosyl 100.0 2E-58 7E-63 463.3 31.9 425 9-453 8-463 (463)
6 2iya_A OLEI, oleandomycin glyc 100.0 1.1E-44 3.7E-49 361.3 35.2 405 5-452 7-420 (424)
7 4amg_A Snogd; transferase, pol 100.0 1.7E-43 5.8E-48 349.8 27.9 361 8-452 20-399 (400)
8 1iir_A Glycosyltransferase GTF 100.0 2.3E-43 7.8E-48 350.7 22.4 384 11-453 1-400 (415)
9 1rrv_A Glycosyltransferase GTF 100.0 1.2E-41 4.1E-46 338.5 25.3 385 11-453 1-401 (416)
10 3rsc_A CALG2; TDP, enediyne, s 100.0 1.8E-40 6E-45 329.9 32.2 381 7-451 17-411 (415)
11 3h4t_A Glycosyltransferase GTF 100.0 2E-41 6.9E-46 335.3 20.8 373 11-452 1-381 (404)
12 3ia7_A CALG4; glycosysltransfe 100.0 1.2E-39 4E-44 322.4 33.0 385 9-451 3-396 (402)
13 2yjn_A ERYCIII, glycosyltransf 100.0 1.7E-39 6E-44 325.3 25.8 381 5-452 15-434 (441)
14 2p6p_A Glycosyl transferase; X 100.0 2.5E-38 8.4E-43 311.2 26.4 358 11-452 1-378 (384)
15 2iyf_A OLED, oleandomycin glyc 100.0 1.6E-37 5.5E-42 310.0 31.5 364 9-432 6-383 (430)
16 3oti_A CALG3; calicheamicin, T 100.0 2.1E-36 7.1E-41 299.0 24.1 357 7-452 17-396 (398)
17 4fzr_A SSFS6; structural genom 100.0 6.2E-37 2.1E-41 302.7 19.8 351 5-432 10-384 (398)
18 3tsa_A SPNG, NDP-rhamnosyltran 100.0 3.8E-35 1.3E-39 289.1 23.7 359 10-451 1-386 (391)
19 3otg_A CALG1; calicheamicin, T 100.0 6.8E-32 2.3E-36 267.7 33.3 353 5-432 15-392 (412)
20 3s2u_A UDP-N-acetylglucosamine 100.0 5.3E-31 1.8E-35 256.6 29.8 339 11-452 3-355 (365)
21 2o6l_A UDP-glucuronosyltransfe 99.9 2.2E-27 7.4E-32 205.7 14.7 162 259-432 8-170 (170)
22 1f0k_A MURG, UDP-N-acetylgluco 99.9 3.2E-20 1.1E-24 180.4 26.9 306 11-414 7-324 (364)
23 3hbm_A UDP-sugar hydrolase; PS 99.7 1.8E-15 6.1E-20 140.1 21.2 115 272-395 157-274 (282)
24 2jzc_A UDP-N-acetylglucosamine 99.7 1.2E-16 4.3E-21 141.9 9.7 136 266-411 22-197 (224)
25 3c48_A Predicted glycosyltrans 99.4 3.3E-11 1.1E-15 119.6 26.5 369 7-452 17-426 (438)
26 1v4v_A UDP-N-acetylglucosamine 99.4 2.3E-12 8E-17 125.3 16.8 129 271-414 197-335 (376)
27 3dzc_A UDP-N-acetylglucosamine 99.4 2.5E-12 8.6E-17 126.0 12.9 131 270-414 228-368 (396)
28 3ot5_A UDP-N-acetylglucosamine 99.4 8.4E-12 2.9E-16 122.5 16.2 161 270-451 222-392 (403)
29 2gek_A Phosphatidylinositol ma 99.4 2.3E-10 7.8E-15 112.2 25.4 324 7-426 17-363 (406)
30 3okp_A GDP-mannose-dependent a 99.4 1.5E-10 5E-15 113.0 23.8 324 7-426 1-358 (394)
31 3fro_A GLGA glycogen synthase; 99.3 2.2E-10 7.7E-15 113.3 24.6 361 9-427 1-411 (439)
32 3beo_A UDP-N-acetylglucosamine 99.3 1.2E-09 4E-14 106.0 24.9 130 271-414 204-343 (375)
33 1vgv_A UDP-N-acetylglucosamine 99.3 6.1E-11 2.1E-15 115.5 15.7 130 271-414 204-343 (384)
34 2r60_A Glycosyl transferase, g 99.2 3.5E-09 1.2E-13 106.9 25.3 94 325-427 334-439 (499)
35 2jjm_A Glycosyl transferase, g 99.2 1.2E-08 4.1E-13 99.6 26.5 331 10-427 15-365 (394)
36 2iuy_A Avigt4, glycosyltransfe 99.1 1.7E-09 5.8E-14 103.6 18.5 125 275-412 164-307 (342)
37 2iw1_A Lipopolysaccharide core 99.0 4.4E-08 1.5E-12 94.6 24.0 161 273-450 196-370 (374)
38 2x6q_A Trehalose-synthase TRET 99.0 2.2E-07 7.5E-12 91.3 27.9 142 274-426 232-393 (416)
39 4hwg_A UDP-N-acetylglucosamine 99.0 1.8E-09 6.1E-14 105.0 10.9 128 272-414 203-343 (385)
40 3s28_A Sucrose synthase 1; gly 98.7 3.4E-06 1.2E-10 88.9 24.0 142 273-425 572-747 (816)
41 2vsy_A XCC0866; transferase, g 98.6 0.00014 4.6E-09 74.4 34.0 94 326-425 434-535 (568)
42 1rzu_A Glycogen synthase 1; gl 98.6 2.7E-06 9.1E-11 85.3 20.5 130 274-414 292-444 (485)
43 2f9f_A First mannosyl transfer 98.5 4.6E-07 1.6E-11 77.8 10.7 140 274-427 24-174 (177)
44 2qzs_A Glycogen synthase; glyc 98.4 2.4E-05 8.1E-10 78.3 21.5 133 273-414 292-445 (485)
45 2hy7_A Glucuronosyltransferase 98.2 8.9E-05 3E-09 72.4 19.5 114 274-414 223-353 (406)
46 3qhp_A Type 1 capsular polysac 97.9 9.8E-05 3.4E-09 62.0 10.7 142 273-428 2-156 (166)
47 2bfw_A GLGA glycogen synthase; 97.8 0.00031 1.1E-08 60.9 13.3 141 275-427 38-196 (200)
48 3tov_A Glycosyl transferase fa 97.7 0.0017 5.8E-08 61.9 17.9 106 8-143 6-115 (349)
49 2xci_A KDO-transferase, 3-deox 97.7 0.00036 1.2E-08 67.3 12.3 98 327-432 261-365 (374)
50 4gyw_A UDP-N-acetylglucosamine 97.6 0.0021 7.3E-08 67.3 17.9 138 271-414 521-669 (723)
51 3oy2_A Glycosyltransferase B73 97.6 0.00087 3E-08 65.2 14.1 132 273-414 184-356 (413)
52 1psw_A ADP-heptose LPS heptosy 97.5 0.0043 1.5E-07 58.8 17.5 96 271-370 179-286 (348)
53 3q3e_A HMW1C-like glycosyltran 97.5 0.0019 6.4E-08 65.3 15.1 136 273-414 441-589 (631)
54 3rhz_A GTF3, nucleotide sugar 97.5 0.00019 6.6E-09 68.0 7.7 146 274-450 179-336 (339)
55 2gt1_A Lipopolysaccharide hept 96.7 0.041 1.4E-06 51.5 15.5 132 271-413 177-322 (326)
56 2x0d_A WSAF; GT4 family, trans 96.0 0.014 4.7E-07 56.9 7.7 79 326-414 295-380 (413)
57 3vue_A GBSS-I, granule-bound s 94.5 0.66 2.3E-05 46.6 14.7 132 274-412 328-476 (536)
58 2iz6_A Molybdenum cofactor car 87.6 4.4 0.00015 33.8 10.0 77 329-412 92-173 (176)
59 1uqt_A Alpha, alpha-trehalose- 84.2 7.2 0.00025 38.3 11.3 105 328-452 333-452 (482)
60 3t5t_A Putative glycosyltransf 83.5 5.7 0.0002 39.1 10.1 108 327-452 353-471 (496)
61 3nb0_A Glycogen [starch] synth 83.0 3.7 0.00013 42.1 8.6 79 326-411 490-592 (725)
62 2phj_A 5'-nucleotidase SURE; S 78.9 15 0.0005 32.5 10.1 112 10-146 1-127 (251)
63 2wqk_A 5'-nucleotidase SURE; S 78.0 4.8 0.00016 35.7 6.7 40 10-55 1-40 (251)
64 1g5t_A COB(I)alamin adenosyltr 73.4 27 0.00092 29.5 9.9 98 9-128 27-131 (196)
65 3vue_A GBSS-I, granule-bound s 71.8 3.1 0.00011 41.6 4.4 40 8-51 7-52 (536)
66 1yt5_A Inorganic polyphosphate 68.6 4.2 0.00014 36.3 4.1 52 345-413 42-96 (258)
67 2x0d_A WSAF; GT4 family, trans 67.0 3.7 0.00013 39.4 3.7 41 8-52 44-89 (413)
68 3zqu_A Probable aromatic acid 63.4 3.5 0.00012 35.5 2.3 46 9-59 3-48 (209)
69 2i2c_A Probable inorganic poly 63.3 5.6 0.00019 35.8 3.9 52 345-413 36-93 (272)
70 3qjg_A Epidermin biosynthesis 62.5 8.8 0.0003 31.9 4.6 44 11-59 6-49 (175)
71 1ccw_A Protein (glutamate muta 61.5 9.2 0.00031 30.3 4.4 43 9-55 2-44 (137)
72 3qjg_A Epidermin biosynthesis 61.4 37 0.0013 28.0 8.3 114 273-391 7-143 (175)
73 2an1_A Putative kinase; struct 60.0 7 0.00024 35.5 3.9 95 288-413 21-119 (292)
74 1qzu_A Hypothetical protein MD 59.4 13 0.00045 31.8 5.3 48 8-60 17-65 (206)
75 2ywr_A Phosphoribosylglycinami 58.5 43 0.0015 28.7 8.5 103 10-147 1-111 (216)
76 3s2u_A UDP-N-acetylglucosamine 58.4 33 0.0011 32.0 8.5 95 274-370 5-121 (365)
77 1u0t_A Inorganic polyphosphate 57.4 6.3 0.00022 36.1 3.1 52 345-413 76-131 (307)
78 3auf_A Glycinamide ribonucleot 57.4 94 0.0032 26.8 11.7 105 8-147 20-132 (229)
79 2e6c_A 5'-nucleotidase SURE; S 57.1 1E+02 0.0034 27.0 11.5 115 11-146 1-129 (244)
80 1p3y_1 MRSD protein; flavoprot 56.8 44 0.0015 28.1 8.1 135 274-413 11-186 (194)
81 1ydh_A AT5G11950; structural g 56.7 22 0.00077 30.5 6.3 44 328-372 89-143 (216)
82 3vot_A L-amino acid ligase, BL 56.6 55 0.0019 31.1 9.9 33 107-141 67-101 (425)
83 1sbz_A Probable aromatic acid 56.4 5 0.00017 34.1 2.1 43 11-58 1-44 (197)
84 3qua_A Putative uncharacterize 55.6 45 0.0016 28.2 8.0 44 328-372 101-155 (199)
85 3lqk_A Dipicolinate synthase s 55.3 12 0.00041 31.8 4.3 46 9-58 6-51 (201)
86 3pfn_A NAD kinase; structural 54.4 8.8 0.0003 36.0 3.6 52 345-413 109-164 (365)
87 3lqk_A Dipicolinate synthase s 54.3 45 0.0015 28.3 7.7 137 273-413 9-186 (201)
88 3sbx_A Putative uncharacterize 52.9 30 0.001 29.0 6.3 42 329-371 93-145 (189)
89 4dzz_A Plasmid partitioning pr 52.1 37 0.0013 28.2 7.1 38 11-52 1-40 (206)
90 2yxb_A Coenzyme B12-dependent 52.0 11 0.00036 30.9 3.4 42 8-53 16-57 (161)
91 3zzm_A Bifunctional purine bio 51.8 20 0.00067 35.0 5.5 99 10-127 10-112 (523)
92 2ejb_A Probable aromatic acid 50.9 8.2 0.00028 32.5 2.5 44 11-59 2-45 (189)
93 3afo_A NADH kinase POS5; alpha 50.8 17 0.00058 34.5 5.0 59 336-413 108-171 (388)
94 3av3_A Phosphoribosylglycinami 50.1 1.2E+02 0.0041 25.8 9.9 103 10-147 3-113 (212)
95 3l7i_A Teichoic acid biosynthe 49.2 34 0.0012 35.4 7.5 108 332-452 605-719 (729)
96 1rcu_A Conserved hypothetical 49.1 82 0.0028 26.4 8.5 93 263-372 51-150 (195)
97 1g63_A Epidermin modifying enz 46.9 14 0.00049 30.8 3.4 45 11-60 3-47 (181)
98 1y80_A Predicted cobalamin bin 46.6 19 0.00065 30.7 4.3 44 8-55 86-129 (210)
99 3ty2_A 5'-nucleotidase SURE; s 45.7 25 0.00087 31.1 4.9 43 7-55 8-50 (261)
100 4e5s_A MCCFLIKE protein (BA_56 45.5 32 0.0011 31.8 5.9 72 286-372 63-136 (331)
101 2i2x_B MTAC, methyltransferase 45.5 24 0.00084 31.2 5.0 44 8-55 121-164 (258)
102 3pdi_B Nitrogenase MOFE cofact 45.0 65 0.0022 31.2 8.3 33 108-145 368-400 (458)
103 3tov_A Glycosyl transferase fa 41.8 18 0.00063 33.6 3.7 100 10-146 185-288 (349)
104 3fgn_A Dethiobiotin synthetase 41.4 57 0.002 28.7 6.7 37 9-49 24-62 (251)
105 3mcu_A Dipicolinate synthase, 41.3 21 0.00073 30.4 3.6 43 9-56 4-47 (207)
106 3ezx_A MMCP 1, monomethylamine 40.3 29 0.001 29.7 4.5 46 7-56 89-134 (215)
107 2q5c_A NTRC family transcripti 40.2 29 0.00099 29.3 4.4 41 102-148 130-170 (196)
108 1kjn_A MTH0777; hypotethical p 40.2 30 0.001 27.6 4.0 47 10-60 6-54 (157)
109 2a33_A Hypothetical protein; s 40.2 86 0.0029 26.8 7.4 43 329-372 94-147 (215)
110 1mvl_A PPC decarboxylase athal 38.9 40 0.0014 28.8 5.0 46 9-60 18-63 (209)
111 3oy2_A Glycosyltransferase B73 38.4 91 0.0031 29.0 8.2 38 11-53 1-41 (413)
112 4h1h_A LMO1638 protein; MCCF-l 38.3 46 0.0016 30.6 5.8 71 286-371 63-135 (327)
113 1o97_C Electron transferring f 37.9 49 0.0017 29.4 5.6 41 105-147 102-148 (264)
114 3dfz_A SIRC, precorrin-2 dehyd 37.4 1.5E+02 0.005 25.5 8.5 143 270-432 30-185 (223)
115 3sr3_A Microcin immunity prote 37.2 46 0.0016 30.7 5.6 72 286-372 64-137 (336)
116 1o4v_A Phosphoribosylaminoimid 36.5 1.8E+02 0.0062 24.0 11.9 37 272-310 13-49 (183)
117 1p3y_1 MRSD protein; flavoprot 35.9 13 0.00044 31.5 1.4 45 9-58 7-51 (194)
118 3lyh_A Cobalamin (vitamin B12) 35.7 90 0.0031 23.7 6.3 37 272-308 6-42 (126)
119 3kcq_A Phosphoribosylglycinami 35.5 2.1E+02 0.0071 24.4 9.3 102 6-147 4-113 (215)
120 3mc3_A DSRE/DSRF-like family p 35.2 36 0.0012 26.5 3.9 44 10-57 15-61 (134)
121 1z0s_A Probable inorganic poly 35.2 17 0.00058 32.7 2.2 26 346-371 70-98 (278)
122 4b4o_A Epimerase family protei 34.7 36 0.0012 30.4 4.4 33 11-51 1-33 (298)
123 1wek_A Hypothetical protein TT 34.2 74 0.0025 27.2 6.0 90 274-372 70-170 (217)
124 1efv_B Electron transfer flavo 33.9 63 0.0021 28.5 5.7 41 105-147 106-152 (255)
125 3tqr_A Phosphoribosylglycinami 32.7 2.1E+02 0.0072 24.3 8.6 105 8-147 3-114 (215)
126 2lnd_A De novo designed protei 32.4 36 0.0012 23.6 2.9 50 362-412 49-100 (112)
127 1zl0_A Hypothetical protein PA 32.3 76 0.0026 28.9 6.1 73 286-373 65-139 (311)
128 1psw_A ADP-heptose LPS heptosy 32.3 49 0.0017 30.3 5.0 39 11-53 181-224 (348)
129 1efp_B ETF, protein (electron 31.9 62 0.0021 28.5 5.3 39 106-146 104-148 (252)
130 1t35_A Hypothetical protein YV 31.8 1.6E+02 0.0054 24.5 7.6 44 328-372 81-135 (191)
131 3eya_A Pyruvate dehydrogenase 31.4 93 0.0032 30.8 7.2 77 291-371 7-99 (549)
132 3zqu_A Probable aromatic acid 31.1 2E+02 0.0067 24.4 8.1 116 273-393 6-163 (209)
133 3n7t_A Macrophage binding prot 31.0 69 0.0024 28.0 5.5 39 9-51 8-57 (247)
134 2r8r_A Sensor protein; KDPD, P 29.8 56 0.0019 28.3 4.5 40 9-52 5-44 (228)
135 3qvl_A Putative hydantoin race 29.7 2.7E+02 0.0094 24.0 10.3 37 11-51 2-39 (245)
136 1id1_A Putative potassium chan 29.5 27 0.00094 27.7 2.4 34 9-51 2-35 (153)
137 1jkx_A GART;, phosphoribosylgl 29.3 2.4E+02 0.0081 23.9 8.4 102 11-147 1-110 (212)
138 1weh_A Conserved hypothetical 29.1 77 0.0026 25.9 5.1 88 274-371 34-134 (171)
139 3s40_A Diacylglycerol kinase; 28.7 1E+02 0.0035 27.8 6.4 80 274-372 12-97 (304)
140 2pju_A Propionate catabolism o 28.7 52 0.0018 28.4 4.1 27 116-145 153-179 (225)
141 3bq9_A Predicted rossmann fold 28.5 86 0.0029 30.1 5.8 32 338-370 241-284 (460)
142 3mjf_A Phosphoribosylamine--gl 28.4 77 0.0026 30.3 5.8 24 10-40 3-26 (431)
143 3lrx_A Putative hydrogenase; a 28.0 35 0.0012 27.4 2.8 38 10-54 23-60 (158)
144 1ozh_A ALS, acetolactate synth 27.9 1.1E+02 0.0039 30.3 7.1 77 290-371 14-106 (566)
145 2q5c_A NTRC family transcripti 27.7 21 0.00073 30.1 1.4 31 343-374 50-80 (196)
146 1jx7_A Hypothetical protein YC 27.7 52 0.0018 24.5 3.6 43 12-58 3-50 (117)
147 3ia7_A CALG4; glycosysltransfe 27.3 1.1E+02 0.0038 28.2 6.7 37 273-311 6-42 (402)
148 4g6h_A Rotenone-insensitive NA 27.2 44 0.0015 32.8 3.8 37 7-52 39-75 (502)
149 2bon_A Lipid kinase; DAG kinas 27.1 1.1E+02 0.0039 27.9 6.5 68 288-373 44-119 (332)
150 2nxw_A Phenyl-3-pyruvate decar 26.9 66 0.0023 32.1 5.1 81 289-371 23-117 (565)
151 3dhn_A NAD-dependent epimerase 26.4 1E+02 0.0034 25.9 5.7 34 10-51 4-37 (227)
152 2q37_A OHCU decarboxylase; 2-O 26.2 2.3E+02 0.0077 23.4 7.4 55 376-431 117-171 (181)
153 3qrx_B Melittin; calcium-bindi 26.0 22 0.00076 18.5 0.7 17 353-369 1-17 (26)
154 2qv7_A Diacylglycerol kinase D 25.8 82 0.0028 28.9 5.2 81 274-372 28-114 (337)
155 3lq1_A 2-succinyl-5-enolpyruvy 25.7 1.6E+02 0.0054 29.3 7.7 78 290-371 14-107 (578)
156 2pn1_A Carbamoylphosphate synt 25.5 2E+02 0.0069 25.7 8.0 33 9-50 3-36 (331)
157 2o8i_A AGR_C_4230P, hypothetic 25.4 2.6E+02 0.0089 22.6 7.6 55 376-431 101-155 (165)
158 3ahc_A Phosphoketolase, xylulo 25.3 5.2E+02 0.018 27.1 11.5 142 272-432 660-806 (845)
159 3hww_A 2-succinyl-5-enolpyruvy 25.0 1.3E+02 0.0044 29.8 6.9 77 291-371 12-104 (556)
160 3o7i_A OHCU decarboxylase; lya 24.7 2.5E+02 0.0084 23.4 7.4 55 376-431 126-180 (189)
161 1v5e_A Pyruvate oxidase; oxido 24.3 63 0.0022 32.4 4.4 81 290-371 7-101 (590)
162 2g1u_A Hypothetical protein TM 24.3 66 0.0022 25.4 3.8 35 8-51 17-51 (155)
163 3ox4_A Alcohol dehydrogenase 2 24.0 34 0.0012 32.3 2.3 41 265-307 25-65 (383)
164 3uhj_A Probable glycerol dehyd 23.8 1.2E+02 0.0042 28.5 6.1 91 262-373 44-139 (387)
165 2wvg_A PDC, pyruvate decarboxy 23.8 1E+02 0.0035 30.6 5.9 77 291-371 7-98 (568)
166 3tla_A MCCF; serine protease, 23.7 84 0.0029 29.5 4.8 72 286-372 94-167 (371)
167 3lyu_A Putative hydrogenase; t 23.4 51 0.0018 25.9 2.9 37 10-53 18-54 (142)
168 3llv_A Exopolyphosphatase-rela 23.4 35 0.0012 26.4 1.9 34 9-51 5-38 (141)
169 2vk8_A Pyruvate decarboxylase 23.3 1.1E+02 0.0039 30.2 6.1 78 290-371 7-99 (563)
170 1qkk_A DCTD, C4-dicarboxylate 23.1 2E+02 0.0069 22.0 6.6 48 363-413 74-121 (155)
171 2pgn_A Cyclohexane-1,2-dione h 22.9 1.1E+02 0.0036 30.7 5.8 79 290-371 7-101 (589)
172 3kkl_A Probable chaperone prot 22.6 1.1E+02 0.0039 26.5 5.2 38 10-51 3-51 (244)
173 1g63_A Epidermin modifying enz 22.5 3.2E+02 0.011 22.4 9.3 112 274-392 5-141 (181)
174 1xmp_A PURE, phosphoribosylami 22.5 3.2E+02 0.011 22.3 9.6 142 272-436 11-165 (170)
175 3rfo_A Methionyl-tRNA formyltr 22.3 84 0.0029 28.7 4.4 36 8-52 2-37 (317)
176 2zki_A 199AA long hypothetical 22.2 64 0.0022 26.7 3.5 38 9-51 3-41 (199)
177 3bfj_A 1,3-propanediol oxidore 22.2 59 0.002 30.6 3.5 12 363-374 133-144 (387)
178 3o1l_A Formyltetrahydrofolate 22.1 4.3E+02 0.015 23.7 9.7 107 8-147 103-212 (302)
179 3h4t_A Glycosyltransferase GTF 22.0 2.2E+02 0.0074 26.5 7.6 89 12-145 222-311 (404)
180 2q28_A Oxalyl-COA decarboxylas 21.9 1.3E+02 0.0046 29.7 6.3 76 291-371 12-103 (564)
181 4fzr_A SSFS6; structural genom 21.9 91 0.0031 29.0 4.9 36 274-311 18-53 (398)
182 1qgu_B Protein (nitrogenase mo 21.8 1.6E+02 0.0055 28.9 6.7 25 117-144 434-465 (519)
183 3i83_A 2-dehydropantoate 2-red 21.8 57 0.0019 29.7 3.3 46 11-73 3-48 (320)
184 1ybh_A Acetolactate synthase, 21.7 1.4E+02 0.0046 29.9 6.3 79 289-371 14-108 (590)
185 1q1v_A DEK protein; winged-hel 21.4 1.6E+02 0.0055 20.0 4.6 36 397-434 11-46 (70)
186 2vbi_A Pyruvate decarboxylase; 21.3 94 0.0032 30.9 5.0 77 291-371 7-98 (566)
187 4feg_A Pyruvate oxidase; carba 21.2 1.9E+02 0.0063 29.0 7.2 80 289-371 13-108 (603)
188 3rsc_A CALG2; TDP, enediyne, s 21.1 93 0.0032 29.1 4.8 37 273-311 22-58 (415)
189 3kjh_A CO dehydrogenase/acetyl 20.9 62 0.0021 27.7 3.2 38 11-52 1-38 (254)
190 2kw0_A CCMH protein; oxidoredu 20.7 1.4E+02 0.0047 21.6 4.3 30 421-450 40-69 (90)
191 1ydg_A Trp repressor binding p 20.4 97 0.0033 25.9 4.3 40 7-50 3-43 (211)
192 2x7j_A 2-succinyl-5-enolpyruvy 20.4 87 0.003 31.5 4.5 80 288-371 32-127 (604)
193 2b8t_A Thymidine kinase; deoxy 20.3 2.7E+02 0.0091 23.7 7.1 38 11-52 12-50 (223)
194 1xrs_B D-lysine 5,6-aminomutas 20.3 49 0.0017 29.3 2.3 44 9-56 119-171 (262)
195 2o70_A OHCU decarboxylase; URI 20.1 2.6E+02 0.0088 22.8 6.6 55 376-431 105-159 (174)
196 3l4e_A Uncharacterized peptida 20.1 1.7E+02 0.0058 24.6 5.7 37 271-307 27-63 (206)
197 1bg6_A N-(1-D-carboxylethyl)-L 20.1 60 0.002 29.8 3.1 33 9-50 3-35 (359)
198 3goc_A Endonuclease V; alpha-b 20.1 1.5E+02 0.0053 25.6 5.3 35 111-145 101-142 (237)
199 3hn2_A 2-dehydropantoate 2-red 20.0 63 0.0022 29.2 3.1 46 11-73 3-48 (312)
No 1
>3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A*
Probab=100.00 E-value=3.4e-70 Score=542.06 Aligned_cols=442 Identities=54% Similarity=0.957 Sum_probs=371.9
Q ss_pred CCCCcEEEEEcCCCccCHHHHHHHHHHHhhhcCCCcEEEEEEeCCCcCccccccccccCCCCeeEEeCCCCCCCCCCCCC
Q 012893 7 STQRRHVAVLAFPFGTHAAPLLDLVRRLSEAALEEEVTFSFFSTAQSNGSLFMEKDELRDCKIVPYNVESGLPEGFRFTG 86 (454)
Q Consensus 7 ~~~~~~il~~~~~~~GH~~p~l~la~~L~~~~~G~~h~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 86 (454)
..+++||+++|+|++||++|++.||+.| .++|..+.|||++++.+..++.+...... .+++|+.+|++++++.+...
T Consensus 10 ~~~~~hvv~~P~p~~GHi~P~l~Lak~L--~~~g~~~~vT~~~t~~~~~~~~~~~~~~~-~~i~~~~ipdglp~~~~~~~ 86 (454)
T 3hbf_A 10 GNNLLHVAVLAFPFGTHAAPLLSLVKKI--ATEAPKVTFSFFCTTTTNDTLFSRSNEFL-PNIKYYNVHDGLPKGYVSSG 86 (454)
T ss_dssp --CCCEEEEECCCSSSSHHHHHHHHHHH--HHHCTTSEEEEEECHHHHHHSCSSSSCCC-TTEEEEECCCCCCTTCCCCS
T ss_pred CCCCCEEEEEcCCcccHHHHHHHHHHHH--HhCCCCEEEEEEeCHHHHHhhhcccccCC-CCceEEecCCCCCCCccccC
Confidence 4557899999999999999999999999 55653378999999766555433210001 37999999999998765555
Q ss_pred CCcchHHHHHHhchHHHHHHHHHHHHhcCCCccEEEEcCchhhHHHHHHHcCCCeEEEeCchhhhhhhhhchhHHHhhhC
Q 012893 87 NPREPVEHFLKATPGNFVRALEKAVAKTGLEISCLITDAFLWFAAEMAEEMRVPWIAYWTAGPRSLLAHVDSDIIREIIG 166 (454)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pD~vi~d~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~ 166 (454)
+....+..+.+.....+++.++++.++...++||||+|++.+|+..+|+++|||++.+++++++.+..+++.+.+.+..+
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iI~D~~~~w~~~vA~~lgIP~~~f~t~~a~~~~~~~~~~~~~~~~~ 166 (454)
T 3hbf_A 87 NPREPIFLFIKAMQENFKHVIDEAVAETGKNITCLVTDAFFWFGADLAEEMHAKWVPLWTAGPHSLLTHVYTDLIREKTG 166 (454)
T ss_dssp CTTHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEETTCTTHHHHHHHTTCEEEEEECSCHHHHHHHHTHHHHHHTCC
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcEEEECCcchHHHHHHHHhCCCEEEEeCccHHHHHHHHhhHHHHhhcC
Confidence 55566666666666677777777665544579999999999999999999999999999999998888877655444321
Q ss_pred CC-CCCCCccccCCCCCcCCcCCCCCcccCCCCCCcHHHHHHHhccccCCccEEEecCcccCCHHHHHHHHhccCCeEEe
Q 012893 167 VN-GPENQTLESIPGFSSIRAKDLPEGIISGPLDSPFPIMLDKMGKTLPKATVVAINSYEELDPIVVETLKSRFRKFLNV 245 (454)
Q Consensus 167 ~~-~~~~~~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~v 245 (454)
.. ......+.++||++.++.++++.++.. +......+++.+..+....++.+++||+++||++.++.+++.+|++++|
T Consensus 167 ~~~~~~~~~~~~iPg~p~~~~~dlp~~~~~-~~~~~~~~~~~~~~~~~~~~~~vl~ns~~eLE~~~~~~~~~~~~~v~~v 245 (454)
T 3hbf_A 167 SKEVHDVKSIDVLPGFPELKASDLPEGVIK-DIDVPFATMLHKMGLELPRANAVAINSFATIHPLIENELNSKFKLLLNV 245 (454)
T ss_dssp HHHHTTSSCBCCSTTSCCBCGGGSCTTSSS-CTTSHHHHHHHHHHHHGGGSSCEEESSCGGGCHHHHHHHHTTSSCEEEC
T ss_pred CCccccccccccCCCCCCcChhhCchhhcc-CCchHHHHHHHHHHHhhccCCEEEECChhHhCHHHHHHHHhcCCCEEEE
Confidence 10 112334556899999999999987764 4444466777777777888999999999999999999999888999999
Q ss_pred ccCCCCCCCC-CCCCCCccchhccCCCCcEEEEeeCCCCCCCHHHHHHHHHHHHhcCCCEEEEEcCCcccccchhhhhhh
Q 012893 246 GPSTLTSPPP-VSDPHGCLPWLNEHENASVIYISFGSMITPPRAEVIALAEALEAIGFPFLWSFRGNAEEQLPKGFLERT 324 (454)
Q Consensus 246 Gp~~~~~~~~-~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~~~~ 324 (454)
||+....... ...++++.+||+.++++++|||+|||+...+.+++.+++.+++..+++|||++++.....+|++|.++.
T Consensus 246 GPl~~~~~~~~~~~~~~~~~wLd~~~~~~vVyvsfGS~~~~~~~~~~el~~~l~~~~~~flw~~~~~~~~~lp~~~~~~~ 325 (454)
T 3hbf_A 246 GPFNLTTPQRKVSDEHGCLEWLDQHENSSVVYISFGSVVTPPPHELTALAESLEECGFPFIWSFRGDPKEKLPKGFLERT 325 (454)
T ss_dssp CCHHHHSCCSCCCCTTCHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHHHHCCCEEEECCSCHHHHSCTTHHHHT
T ss_pred CCcccccccccccchHHHHHHHhcCCCCceEEEecCCCCcCCHHHHHHHHHHHHhCCCeEEEEeCCcchhcCCHhHHhhc
Confidence 9997654322 234567899999988999999999999988899999999999999999999999876667899998888
Q ss_pred CCCceEeeccChHhhhcccCcceEEecCCchhHHHHHHcCCCeeccccccchhHHHHHHHHhhceeecCcCCCCCHHHHH
Q 012893 325 KSYGKVVPWAPQLKILEHSSVCVFVTHCGWNSTIEGITGGVPMVCRPVFADQALNQRIIETAWGIGVGVXGEKFTKDETV 404 (454)
Q Consensus 325 ~~nv~v~~~vp~~~ll~~~~~~~~I~HgG~gsv~eal~~GvP~i~~P~~~DQ~~nA~~v~~~~G~G~~~~~~~~~~~~l~ 404 (454)
++|+++++|+||..+|+|+++++||||||+||++||+++|||||++|+.+||+.||+++++.||+|+.++.+.+++++|.
T Consensus 326 ~~~~~vv~w~Pq~~vL~h~~v~~fvtH~G~~S~~Eal~~GvP~i~~P~~~DQ~~Na~~v~~~~g~Gv~l~~~~~~~~~l~ 405 (454)
T 3hbf_A 326 KTKGKIVAWAPQVEILKHSSVGVFLTHSGWNSVLECIVGGVPMISRPFFGDQGLNTILTESVLEIGVGVDNGVLTKESIK 405 (454)
T ss_dssp TTTEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHTTSCSEEECGGGSCCHHHHH
T ss_pred CCceEEEeeCCHHHHHhhcCcCeEEecCCcchHHHHHHcCCCEecCcccccHHHHHHHHHHhhCeeEEecCCCCCHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999996699999988789999999
Q ss_pred HHHHHHhcCchHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHh
Q 012893 405 NALKQVLSSEEGKRMRENVGALKKLAFKAVESDGSSTKNFKALVEVVN 452 (454)
Q Consensus 405 ~av~~vl~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 452 (454)
++|+++|+|+++++||+||+++++++++++++||||..++++|++++.
T Consensus 406 ~av~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gGsS~~~l~~~v~~i~ 453 (454)
T 3hbf_A 406 KALELTMSSEKGGIMRQKIVKLKESAFKAVEQNGTSAMDFTTLIQIVT 453 (454)
T ss_dssp HHHHHHHSSHHHHHHHHHHHHHHHHHHHHTSTTSHHHHHHHHHHHHHT
T ss_pred HHHHHHHCCChHHHHHHHHHHHHHHHHHhhccCCCHHHHHHHHHHHHh
Confidence 999999998777899999999999999999999999999999999885
No 2
>2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A*
Probab=100.00 E-value=1.8e-64 Score=505.90 Aligned_cols=443 Identities=54% Similarity=0.955 Sum_probs=347.4
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHhhhcCCCcEEEEEEeCCCcCccccccccccCCCCeeEEeCCCCCCCCCCCCCC
Q 012893 8 TQRRHVAVLAFPFGTHAAPLLDLVRRLSEAALEEEVTFSFFSTAQSNGSLFMEKDELRDCKIVPYNVESGLPEGFRFTGN 87 (454)
Q Consensus 8 ~~~~~il~~~~~~~GH~~p~l~la~~L~~~~~G~~h~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 87 (454)
++++||+++|+|++||++|++.||++| .++||.+.|||++++.+.+.+.+........+++|++++++++...+...+
T Consensus 5 ~~~~hvv~~p~p~~GHi~P~l~la~~L--~~rGh~v~vt~~~t~~~~~~~~~~~~~~~~~~i~~~~i~~glp~~~~~~~~ 82 (456)
T 2c1x_A 5 TTNPHVAVLAFPFSTHAAPLLAVVRRL--AAAAPHAVFSFFSTSQSNASIFHDSMHTMQCNIKSYDISDGVPEGYVFAGR 82 (456)
T ss_dssp --CCEEEEECCCSSSSHHHHHHHHHHH--HHHCTTSEEEEEECHHHHHHHC-------CTTEEEEECCCCCCTTCCCCCC
T ss_pred CCCCEEEEEcCcccchHHHHHHHHHHH--HhCCCCeEEEEEeCchhHHHhhccccccCCCceEEEeCCCCCCCcccccCC
Confidence 446899999999999999999999999 777622677889886544433221000000379999999888876433223
Q ss_pred CcchHHHHHHhchHHHHHHHHHHHHhcCCCccEEEEcCchhhHHHHHHHcCCCeEEEeCchhhhhhhhhchhHHHhhhCC
Q 012893 88 PREPVEHFLKATPGNFVRALEKAVAKTGLEISCLITDAFLWFAAEMAEEMRVPWIAYWTAGPRSLLAHVDSDIIREIIGV 167 (454)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pD~vi~d~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (454)
....+..+.......+++.+.++.+....+|||||+|.+..|+..+|+++|||+|.+++++...+..+.+.+.+...++.
T Consensus 83 ~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (456)
T 2c1x_A 83 PQEDIELFTRAAPESFRQGMVMAVAETGRPVSCLVADAFIWFAADMAAEMGVAWLPFWTAGPNSLSTHVYIDEIREKIGV 162 (456)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCEEEEETTSTTHHHHHHHHTCEEEEEECSCHHHHHHHHTHHHHHHHHCS
T ss_pred hHHHHHHHHHHhHHHHHHHHHHHHhccCCCceEEEECCchHhHHHHHHHhCCCEEEEeCccHHHHHHHhhhHHHHhccCC
Confidence 44444445444444556666655544345899999999988999999999999999999987776655444433333332
Q ss_pred CC---CCCCccccCCCCCcCCcCCCCCcccCCCCCCcHHHHHHHhccccCCccEEEecCcccCCHHHHHHHHhccCCeEE
Q 012893 168 NG---PENQTLESIPGFSSIRAKDLPEGIISGPLDSPFPIMLDKMGKTLPKATVVAINSYEELDPIVVETLKSRFRKFLN 244 (454)
Q Consensus 168 ~~---~~~~~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 244 (454)
+. .....+..+|+++.++.++++..+........+.+++.+.......++.+++|++++++++.++.+++.+|++++
T Consensus 163 ~~~~~~~~~~~~~~pg~~~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~ns~~~le~~~~~~~~~~~~~~~~ 242 (456)
T 2c1x_A 163 SGIQGREDELLNFIPGMSKVRFRDLQEGIVFGNLNSLFSRMLHRMGQVLPKATAVFINSFEELDDSLTNDLKSKLKTYLN 242 (456)
T ss_dssp SCCTTCTTCBCTTSTTCTTCBGGGSCTTTSSSCTTSHHHHHHHHHHHHGGGSSCEEESSCGGGCHHHHHHHHHHSSCEEE
T ss_pred cccccccccccccCCCCCcccHHhCchhhcCCCcccHHHHHHHHHHHhhhhCCEEEECChHHHhHHHHHHHHhcCCCEEE
Confidence 21 122334457888777777777644433333344555555555567788999999999999988888888899999
Q ss_pred eccCCCCCCCC-CCCCCCccchhccCCCCcEEEEeeCCCCCCCHHHHHHHHHHHHhcCCCEEEEEcCCcccccchhhhhh
Q 012893 245 VGPSTLTSPPP-VSDPHGCLPWLNEHENASVIYISFGSMITPPRAEVIALAEALEAIGFPFLWSFRGNAEEQLPKGFLER 323 (454)
Q Consensus 245 vGp~~~~~~~~-~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~~~ 323 (454)
|||+....... .+.+.++.+|++.++++++|||+|||+.....+++.+++.++++.++++||++++.....++++|.++
T Consensus 243 vGpl~~~~~~~~~~~~~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~l~~~~~~~lw~~~~~~~~~l~~~~~~~ 322 (456)
T 2c1x_A 243 IGPFNLITPPPVVPNTTGCLQWLKERKPTSVVYISFGTVTTPPPAEVVALSEALEASRVPFIWSLRDKARVHLPEGFLEK 322 (456)
T ss_dssp CCCHHHHC---------CHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHHHHTCCEEEECCGGGGGGSCTTHHHH
T ss_pred ecCcccCcccccccchhhHHHHHhcCCCcceEEEecCccccCCHHHHHHHHHHHHhcCCeEEEEECCcchhhCCHHHHhh
Confidence 99997643321 23345688999998888999999999998888889999999999999999999987655688888877
Q ss_pred hCCCceEeeccChHhhhcccCcceEEecCCchhHHHHHHcCCCeeccccccchhHHHHHHHHhhceeecCcCCCCCHHHH
Q 012893 324 TKSYGKVVPWAPQLKILEHSSVCVFVTHCGWNSTIEGITGGVPMVCRPVFADQALNQRIIETAWGIGVGVXGEKFTKDET 403 (454)
Q Consensus 324 ~~~nv~v~~~vp~~~ll~~~~~~~~I~HgG~gsv~eal~~GvP~i~~P~~~DQ~~nA~~v~~~~G~G~~~~~~~~~~~~l 403 (454)
.++|+++++|+||..+|+|++|++||||||+||++||+++|||||++|+.+||+.||+++++.||+|+.++.+.+++++|
T Consensus 323 ~~~~~~v~~w~pq~~vL~h~~~~~fvth~G~~S~~Eal~~GvP~i~~P~~~dQ~~Na~~l~~~~g~g~~l~~~~~~~~~l 402 (456)
T 2c1x_A 323 TRGYGMVVPWAPQAEVLAHEAVGAFVTHCGWNSLWESVAGGVPLICRPFFGDQRLNGRMVEDVLEIGVRIEGGVFTKSGL 402 (456)
T ss_dssp HTTTEEEESCCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEECGGGSCCHHHH
T ss_pred cCCceEEecCCCHHHHhcCCcCCEEEecCCcchHHHHHHhCceEEecCChhhHHHHHHHHHHHhCeEEEecCCCcCHHHH
Confidence 88999999999999999999999999999999999999999999999999999999999999999999998778999999
Q ss_pred HHHHHHHhcCchHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHh
Q 012893 404 VNALKQVLSSEEGKRMRENVGALKKLAFKAVESDGSSTKNFKALVEVVN 452 (454)
Q Consensus 404 ~~av~~vl~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 452 (454)
.++|+++|+|+++++||+||+++++.+++++++||||..++++||+.+.
T Consensus 403 ~~~i~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gGsS~~~l~~~v~~~~ 451 (456)
T 2c1x_A 403 MSCFDQILSQEKGKKLRENLRALRETADRAVGPKGSSTENFITLVDLVS 451 (456)
T ss_dssp HHHHHHHHHSHHHHHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHCCCcHHHHHHHHHHHHHHHHHhhhcCCcHHHHHHHHHHHHH
Confidence 9999999998777799999999999999999999999999999999875
No 3
>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10
Probab=100.00 E-value=1.7e-62 Score=496.32 Aligned_cols=443 Identities=25% Similarity=0.451 Sum_probs=330.6
Q ss_pred CCcccCCCCCcEEEEEcCCCccCHHHHHHHHHHHhhhcCCCcEEEEEEeCCCcCccccccccc--cCC-CCeeEEeCCCC
Q 012893 1 MSEAAGSTQRRHVAVLAFPFGTHAAPLLDLVRRLSEAALEEEVTFSFFSTAQSNGSLFMEKDE--LRD-CKIVPYNVESG 77 (454)
Q Consensus 1 ~~~~~~~~~~~~il~~~~~~~GH~~p~l~la~~L~~~~~G~~h~V~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~i~~~ 77 (454)
|.+. .++++||+++|+|++||++|++.||++| .++| |+|||++++.+.+.+.+.... ..+ .+++|+++|++
T Consensus 1 ~~~~--~~~~~~vl~~p~p~~GHi~P~l~La~~L--~~rG--~~VT~v~t~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~ 74 (482)
T 2pq6_A 1 MGNF--ANRKPHVVMIPYPVQGHINPLFKLAKLL--HLRG--FHITFVNTEYNHKRLLKSRGPKAFDGFTDFNFESIPDG 74 (482)
T ss_dssp ---------CCEEEEECCSSHHHHHHHHHHHHHH--HHTT--CEEEEEEEHHHHHHHC------------CEEEEEECCC
T ss_pred CCcc--cCCCCEEEEecCccchhHHHHHHHHHHH--HhCC--CeEEEEeCCchhhhhccccccccccCCCceEEEECCCC
Confidence 4444 3446899999999999999999999999 8899 999999998776554332000 000 27999999987
Q ss_pred CCCCCCCCCCCcchHHHHHHhchHHHHHHHHHHHHhc-----CCCccEEEEcCchhhHHHHHHHcCCCeEEEeCchhhhh
Q 012893 78 LPEGFRFTGNPREPVEHFLKATPGNFVRALEKAVAKT-----GLEISCLITDAFLWFAAEMAEEMRVPWIAYWTAGPRSL 152 (454)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~pD~vi~d~~~~~~~~~A~~lgiP~v~~~~~~~~~~ 152 (454)
++...... +....+..++......+...++++++.+ ..+|||||+|.+..|+..+|+++|||+|.+++++....
T Consensus 75 lp~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~ll~~l~~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~ 153 (482)
T 2pq6_A 75 LTPMEGDG-DVSQDVPTLCQSVRKNFLKPYCELLTRLNHSTNVPPVTCLVSDCCMSFTIQAAEEFELPNVLYFSSSACSL 153 (482)
T ss_dssp CC----------CCHHHHHHHHTTSSHHHHHHHHHHHHTCSSSCCCCEEEEETTCTHHHHHHHHTTCCEEEEECSCHHHH
T ss_pred CCCccccc-CcchhHHHHHHHHHHHhhHHHHHHHHHHhhhccCCCceEEEECCcchhHHHHHHHcCCCEEEEecccHHHH
Confidence 77621000 1111222222222222334444444433 14799999999999999999999999999999888766
Q ss_pred hhhhchhHHHhhhCCCCCC---------CCccccCCCCCcCCcCCCCCcccCCCCCCcHHHHHHHhccccCCccEEEecC
Q 012893 153 LAHVDSDIIREIIGVNGPE---------NQTLESIPGFSSIRAKDLPEGIISGPLDSPFPIMLDKMGKTLPKATVVAINS 223 (454)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~---------~~~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (454)
..+.+.+.+...-..|... ....+++|++..++..+++.++..........+++.+..+....++.+++|+
T Consensus 154 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~nt 233 (482)
T 2pq6_A 154 LNVMHFRSFVERGIIPFKDESYLTNGCLETKVDWIPGLKNFRLKDIVDFIRTTNPNDIMLEFFIEVADRVNKDTTILLNT 233 (482)
T ss_dssp HHHTTHHHHHHTTCSSCSSGGGGTSSGGGCBCCSSTTCCSCBGGGSCGGGCCSCTTCHHHHHHHHHHHTCCTTCCEEESS
T ss_pred HHHHHHHHHHhcCCCCCccccccccccccCccccCCCCCCCchHHCchhhccCCcccHHHHHHHHHHHhhccCCEEEEcC
Confidence 5544333222111111110 1122345666666666666554432223444555555556677899999999
Q ss_pred cccCCHHHHHHHHhccCCeEEeccCCCC-CCC-----------CC-CCCCCccchhccCCCCcEEEEeeCCCCCCCHHHH
Q 012893 224 YEELDPIVVETLKSRFRKFLNVGPSTLT-SPP-----------PV-SDPHGCLPWLNEHENASVIYISFGSMITPPRAEV 290 (454)
Q Consensus 224 ~~~l~~~~~~~~~~~~~~~~~vGp~~~~-~~~-----------~~-~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~ 290 (454)
+++|+++.++.+++.++++++|||+... ... .. +.+.++.+|++.++++++|||+|||+...+.+++
T Consensus 234 ~~~le~~~~~~~~~~~~~v~~VGPl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~wld~~~~~~vv~vs~GS~~~~~~~~~ 313 (482)
T 2pq6_A 234 FNELESDVINALSSTIPSIYPIGPLPSLLKQTPQIHQLDSLDSNLWKEDTECLDWLESKEPGSVVYVNFGSTTVMTPEQL 313 (482)
T ss_dssp CGGGGHHHHHHHHTTCTTEEECCCHHHHHHTSTTGGGGCC---------CHHHHHHTTSCTTCEEEEECCSSSCCCHHHH
T ss_pred hHHHhHHHHHHHHHhCCcEEEEcCCcccccccccccccccccccccccchHHHHHHhcCCCCceEEEecCCcccCCHHHH
Confidence 9999999888888877899999999753 111 11 2334578999998888999999999988888889
Q ss_pred HHHHHHHHhcCCCEEEEEcCCc----ccccchhhhhhhCCCceEeeccChHhhhcccCcceEEecCCchhHHHHHHcCCC
Q 012893 291 IALAEALEAIGFPFLWSFRGNA----EEQLPKGFLERTKSYGKVVPWAPQLKILEHSSVCVFVTHCGWNSTIEGITGGVP 366 (454)
Q Consensus 291 ~~~~~~~~~~~~~~i~~~~~~~----~~~l~~~~~~~~~~nv~v~~~vp~~~ll~~~~~~~~I~HgG~gsv~eal~~GvP 366 (454)
.+++.++++.+.+++|+++.+. ...+|++|.++.++|+++++|+||..+|.|++|++||||||+||++||+++|||
T Consensus 314 ~~~~~~l~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~~~pq~~~L~h~~~~~~vth~G~~s~~Eal~~GvP 393 (482)
T 2pq6_A 314 LEFAWGLANCKKSFLWIIRPDLVIGGSVIFSSEFTNEIADRGLIASWCPQDKVLNHPSIGGFLTHCGWNSTTESICAGVP 393 (482)
T ss_dssp HHHHHHHHHTTCEEEEECCGGGSTTTGGGSCHHHHHHHTTTEEEESCCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCC
T ss_pred HHHHHHHHhcCCcEEEEEcCCccccccccCcHhHHHhcCCCEEEEeecCHHHHhcCCCCCEEEecCCcchHHHHHHcCCC
Confidence 9999999999999999998642 123788888888899999999999999999999999999999999999999999
Q ss_pred eeccccccchhHHHHHHH-HhhceeecCcCCCCCHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHhhCCChHHHHH
Q 012893 367 MVCRPVFADQALNQRIIE-TAWGIGVGVXGEKFTKDETVNALKQVLSSEEGKRMRENVGALKKLAFKAVESDGSSTKNFK 445 (454)
Q Consensus 367 ~i~~P~~~DQ~~nA~~v~-~~~G~G~~~~~~~~~~~~l~~av~~vl~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~ 445 (454)
||++|+.+||+.||++++ +. |+|+.++ .++++++|.++|+++|+|+++++||+||+++++++++++.+||||..+++
T Consensus 394 ~i~~P~~~dQ~~na~~~~~~~-G~g~~l~-~~~~~~~l~~~i~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gGss~~~l~ 471 (482)
T 2pq6_A 394 MLCWPFFADQPTDCRFICNEW-EIGMEID-TNVKREELAKLINEVIAGDKGKKMKQKAMELKKKAEENTRPGGCSYMNLN 471 (482)
T ss_dssp EEECCCSTTHHHHHHHHHHTS-CCEEECC-SSCCHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHTSTTCHHHHHHH
T ss_pred EEecCcccchHHHHHHHHHHh-CEEEEEC-CCCCHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHhcCCcHHHHHH
Confidence 999999999999999997 56 9999998 57999999999999999876678999999999999999999999999999
Q ss_pred HHHHHHh
Q 012893 446 ALVEVVN 452 (454)
Q Consensus 446 ~~~~~~~ 452 (454)
+|++.+.
T Consensus 472 ~~v~~~~ 478 (482)
T 2pq6_A 472 KVIKDVL 478 (482)
T ss_dssp HHHHHTT
T ss_pred HHHHHHH
Confidence 9999875
No 4
>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A*
Probab=100.00 E-value=6.2e-60 Score=476.06 Aligned_cols=431 Identities=26% Similarity=0.426 Sum_probs=318.9
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHhhhcC-CCcEEEEEEeCCCc--CccccccccccCCCCeeEEeCCCCCCCCCCC
Q 012893 8 TQRRHVAVLAFPFGTHAAPLLDLVRRLSEAAL-EEEVTFSFFSTAQS--NGSLFMEKDELRDCKIVPYNVESGLPEGFRF 84 (454)
Q Consensus 8 ~~~~~il~~~~~~~GH~~p~l~la~~L~~~~~-G~~h~V~~~~~~~~--~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 84 (454)
.+++||+++|+|++||++|++.||++| .++ | |+|||++++.. ...+.+.....+ .+++|+++|++.....
T Consensus 4 ~~~~~vl~~p~p~~GHv~P~l~La~~L--~~r~G--h~Vt~~t~~~~~~~~~~~~~~~~~~-~~i~~~~l~~~~~~~~-- 76 (480)
T 2vch_A 4 SKTPHVAIIPSPGMGHLIPLVEFAKRL--VHLHG--LTVTFVIAGEGPPSKAQRTVLDSLP-SSISSVFLPPVDLTDL-- 76 (480)
T ss_dssp --CCEEEEECCSCHHHHHHHHHHHHHH--HHHHC--CEEEEEECCSSSCC-CHHHHHC-CC-TTEEEEECCCCCCTTS--
T ss_pred CCCcEEEEecCcchhHHHHHHHHHHHH--HhCCC--CEEEEEECCCcchhhhhhhhccccC-CCceEEEcCCCCCCCC--
Confidence 456899999999999999999999999 887 9 99999999873 444443100001 3899999986432111
Q ss_pred CCCCcchHHHH---HHhchHHHHHHHHHHHHhcCCCc-cEEEEcCchhhHHHHHHHcCCCeEEEeCchhhhhhhhhchhH
Q 012893 85 TGNPREPVEHF---LKATPGNFVRALEKAVAKTGLEI-SCLITDAFLWFAAEMAEEMRVPWIAYWTAGPRSLLAHVDSDI 160 (454)
Q Consensus 85 ~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~p-D~vi~d~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~ 160 (454)
.........+ .......+++.++.+.. ..++ |+||+|.+..|+..+|+++|||++.+++++.+....+.+.+.
T Consensus 77 -~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~--~~~~pd~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~ 153 (480)
T 2vch_A 77 -SSSTRIESRISLTVTRSNPELRKVFDSFVE--GGRLPTALVVDLFGTDAFDVAVEFHVPPYIFYPTTANVLSFFLHLPK 153 (480)
T ss_dssp -CTTCCHHHHHHHHHHTTHHHHHHHHHHHHH--TTCCCSEEEECTTCGGGHHHHHHTTCCEEEEECSCHHHHHHHHHHHH
T ss_pred -CCchhHHHHHHHHHHhhhHHHHHHHHHhcc--CCCCCeEEEECCcchhHHHHHHHcCCCEEEEECccHHHHHHHHHHHH
Confidence 1111222222 22222333333333221 2477 999999988899999999999999999998876665554443
Q ss_pred HHhhhCCCCCC-CCccccCCCCCcCCcCCCCCcccCCCCCCcHHHHHHHhccccCCccEEEecCcccCCHHHHHHHHhc-
Q 012893 161 IREIIGVNGPE-NQTLESIPGFSSIRAKDLPEGIISGPLDSPFPIMLDKMGKTLPKATVVAINSYEELDPIVVETLKSR- 238 (454)
Q Consensus 161 ~~~~~~~~~~~-~~~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~- 238 (454)
..+....+..+ .... ..|++..+...+++..+..+ . ....+.+.+........+.+++|+++++++..+..+.+.
T Consensus 154 ~~~~~~~~~~~~~~~~-~~Pg~~p~~~~~l~~~~~~~-~-~~~~~~~~~~~~~~~~~~g~~~nt~~ele~~~~~~l~~~~ 230 (480)
T 2vch_A 154 LDETVSCEFRELTEPL-MLPGCVPVAGKDFLDPAQDR-K-DDAYKWLLHNTKRYKEAEGILVNTFFELEPNAIKALQEPG 230 (480)
T ss_dssp HHHHCCSCGGGCSSCB-CCTTCCCBCGGGSCGGGSCT-T-SHHHHHHHHHHHHGGGCSEEEESCCTTTSHHHHHHHHSCC
T ss_pred HHhcCCCcccccCCcc-cCCCCCCCChHHCchhhhcC-C-chHHHHHHHHHHhcccCCEEEEcCHHHHhHHHHHHHHhcc
Confidence 33221111000 1111 25777666666666544321 1 122333333334455677888999999999877666542
Q ss_pred --cCCeEEeccCCCCCCCC--CCCCCCccchhccCCCCcEEEEeeCCCCCCCHHHHHHHHHHHHhcCCCEEEEEcCCc--
Q 012893 239 --FRKFLNVGPSTLTSPPP--VSDPHGCLPWLNEHENASVIYISFGSMITPPRAEVIALAEALEAIGFPFLWSFRGNA-- 312 (454)
Q Consensus 239 --~~~~~~vGp~~~~~~~~--~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-- 312 (454)
++++++|||+....... .+.+.++.+|++.++++++|||||||+...+.+++.+++.+++..+++|||++++..
T Consensus 231 ~~~~~v~~vGpl~~~~~~~~~~~~~~~~~~wLd~~~~~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~lw~~~~~~~~ 310 (480)
T 2vch_A 231 LDKPPVYPVGPLVNIGKQEAKQTEESECLKWLDNQPLGSVLYVSFGSGGTLTCEQLNELALGLADSEQRFLWVIRSPSGI 310 (480)
T ss_dssp TTCCCEEECCCCCCCSCSCC-----CHHHHHHHTSCTTCEEEEECTTTCCCCHHHHHHHHHHHHHTTCEEEEEECCCCSS
T ss_pred cCCCcEEEEeccccccccccCccchhHHHHHhcCCCCCceEEEecccccCCCHHHHHHHHHHHHhcCCcEEEEECCcccc
Confidence 47899999998654221 223457889999988889999999999988889999999999999999999998642
Q ss_pred --------------ccccchhhhhhhCCCceEee-ccChHhhhcccCcceEEecCCchhHHHHHHcCCCeeccccccchh
Q 012893 313 --------------EEQLPKGFLERTKSYGKVVP-WAPQLKILEHSSVCVFVTHCGWNSTIEGITGGVPMVCRPVFADQA 377 (454)
Q Consensus 313 --------------~~~l~~~~~~~~~~nv~v~~-~vp~~~ll~~~~~~~~I~HgG~gsv~eal~~GvP~i~~P~~~DQ~ 377 (454)
...+|++|.++..++.+++. |+||.++|+|++|++||||||+||++||+++|||||++|+.+||+
T Consensus 311 ~~~~~~~~~~~~~~~~~lp~~~~~~~~~~g~~v~~w~Pq~~vL~h~~v~~fvtHgG~~S~~Eal~~GvP~i~~P~~~DQ~ 390 (480)
T 2vch_A 311 ANSSYFDSHSQTDPLTFLPPGFLERTKKRGFVIPFWAPQAQVLAHPSTGGFLTHCGWNSTLESVVSGIPLIAWPLYAEQK 390 (480)
T ss_dssp TTTTTTCC--CSCGGGGSCTTHHHHTTTTEEEEESCCCHHHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHH
T ss_pred ccccccccccccchhhhcCHHHHHHhCCCeEEEeCccCHHHHhCCCCcCeEEecccchhHHHHHHcCCCEEeccccccch
Confidence 12477777777666666765 999999999999999999999999999999999999999999999
Q ss_pred HHHHHH-HHhhceeecCcCC---CCCHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHh
Q 012893 378 LNQRII-ETAWGIGVGVXGE---KFTKDETVNALKQVLSSEEGKRMRENVGALKKLAFKAVESDGSSTKNFKALVEVVN 452 (454)
Q Consensus 378 ~nA~~v-~~~~G~G~~~~~~---~~~~~~l~~av~~vl~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 452 (454)
.||+++ ++. |+|+.++.. .+++++|.++|+++|+++++++||+||+++++++++++.++|+|..++++||+.+.
T Consensus 391 ~na~~l~~~~-G~g~~l~~~~~~~~~~~~l~~av~~vl~~~~~~~~r~~a~~l~~~~~~a~~~gGss~~~~~~~v~~~~ 468 (480)
T 2vch_A 391 MNAVLLSEDI-RAALRPRAGDDGLVRREEVARVVKGLMEGEEGKGVRNKMKELKEAACRVLKDDGTSTKALSLVALKWK 468 (480)
T ss_dssp HHHHHHHHTT-CCEECCCCCTTSCCCHHHHHHHHHHHHTSTHHHHHHHHHHHHHHHHHHHTSTTSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHh-CeEEEeecccCCccCHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHH
Confidence 999997 577 999999765 68999999999999986555799999999999999999999999999999999875
No 5
>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A*
Probab=100.00 E-value=2e-58 Score=463.27 Aligned_cols=425 Identities=22% Similarity=0.378 Sum_probs=317.5
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHhhhcC--CCcEEEEEEeCCCcCcc-----ccccccccCCCCeeEEeCCCC-CCC
Q 012893 9 QRRHVAVLAFPFGTHAAPLLDLVRRLSEAAL--EEEVTFSFFSTAQSNGS-----LFMEKDELRDCKIVPYNVESG-LPE 80 (454)
Q Consensus 9 ~~~~il~~~~~~~GH~~p~l~la~~L~~~~~--G~~h~V~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~i~~~-~~~ 80 (454)
+++||+++|+|++||++|++.||++| +++ | |+|||++++.+.+. +.+. ...+ .+++|+++|++ ++.
T Consensus 8 ~~~~vv~~p~p~~GHi~P~l~La~~L--~~r~pG--~~Vt~v~t~~~~~~~~~~~~~~~-~~~~-~~i~~~~lp~~~~~~ 81 (463)
T 2acv_A 8 KNSELIFIPAPGIGHLASALEFAKLL--TNHDKN--LYITVFCIKFPGMPFADSYIKSV-LASQ-PQIQLIDLPEVEPPP 81 (463)
T ss_dssp HCEEEEEECCSSTTTHHHHHHHHHHH--HHTCTT--EEEEEEECCCTTCCCCHHHHHHH-HCSC-TTEEEEECCCCCCCC
T ss_pred CCCEEEEEcCcccchHHHHHHHHHHH--HhcCCC--cEEEEEEcCCcchhhhhhhhhhc-ccCC-CCceEEECCCCCCCc
Confidence 46899999999999999999999999 778 9 99999999876421 1110 0011 38999999965 332
Q ss_pred CCCCCCCCcchHHHHHHhchHHHHHHHHHHHHhc-CCCccEEEEcCchhhHHHHHHHcCCCeEEEeCchhhhhhhhhchh
Q 012893 81 GFRFTGNPREPVEHFLKATPGNFVRALEKAVAKT-GLEISCLITDAFLWFAAEMAEEMRVPWIAYWTAGPRSLLAHVDSD 159 (454)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~pD~vi~d~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~ 159 (454)
.+........+....... ...++++++.+ ..+|||||+|.++.|+..+|+++|||++.+++++.+.+..+++.+
T Consensus 82 -~~~~~~~~~~~~~~~~~~----~~~~~~ll~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~ 156 (463)
T 2acv_A 82 -QELLKSPEFYILTFLESL----IPHVKATIKTILSNKVVGLVLDFFCVSMIDVGNEFGIPSYLFLTSNVGFLSLMLSLK 156 (463)
T ss_dssp -GGGGGSHHHHHHHHHHHT----HHHHHHHHHHHCCTTEEEEEEEGGGGGGHHHHHHTTCCEEEEESSCHHHHHHHHHGG
T ss_pred -ccccCCccHHHHHHHHhh----hHHHHHHHHhccCCCCeEEEECCcchhHHHHHHHcCCCEEEEeCchHHHHHHHHHHH
Confidence 110011101111122222 23344444442 248999999999999999999999999999998877665544332
Q ss_pred HHHhhhCCCCCCCCc---cccCCCC-CcCCcCCCCCcccCCCCCCcHHHHHHHhccccCCccEEEecCcccCCHHHHHHH
Q 012893 160 IIREIIGVNGPENQT---LESIPGF-SSIRAKDLPEGIISGPLDSPFPIMLDKMGKTLPKATVVAINSYEELDPIVVETL 235 (454)
Q Consensus 160 ~~~~~~~~~~~~~~~---~~~~p~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 235 (454)
...... +...... ...+|++ +.++..+++..+..+ .. ..+.+.+.......++.+++||++++++.....+
T Consensus 157 ~~~~~~--~~~~~~~~~~~~~~pg~~~~~~~~~l~~~~~~~--~~-~~~~~~~~~~~~~~~~~~l~nt~~ele~~~~~~l 231 (463)
T 2acv_A 157 NRQIEE--VFDDSDRDHQLLNIPGISNQVPSNVLPDACFNK--DG-GYIAYYKLAERFRDTKGIIVNTFSDLEQSSIDAL 231 (463)
T ss_dssp GSCTTC--CCCCSSGGGCEECCTTCSSCEEGGGSCHHHHCT--TT-HHHHHHHHHHHHTTSSEEEESCCHHHHHHHHHHH
T ss_pred hhcccC--CCCCccccCceeECCCCCCCCChHHCchhhcCC--ch-HHHHHHHHHHhcccCCEEEECCHHHHhHHHHHHH
Confidence 221110 1111111 2236777 666666665433322 12 3333333334456778889999999999877666
Q ss_pred Hhc---cCCeEEeccCCCCCC-CC-C---CCCCCccchhccCCCCcEEEEeeCCCC-CCCHHHHHHHHHHHHhcCCCEEE
Q 012893 236 KSR---FRKFLNVGPSTLTSP-PP-V---SDPHGCLPWLNEHENASVIYISFGSMI-TPPRAEVIALAEALEAIGFPFLW 306 (454)
Q Consensus 236 ~~~---~~~~~~vGp~~~~~~-~~-~---~~~~~~~~~l~~~~~~~~v~vs~Gs~~-~~~~~~~~~~~~~~~~~~~~~i~ 306 (454)
.+. .+++++|||+..... .. . ..+.++.+|++.++++++|||+|||+. ....+++.+++.++++.+++|||
T Consensus 232 ~~~~~p~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~~l~~~~~~~l~ 311 (463)
T 2acv_A 232 YDHDEKIPPIYAVGPLLDLKGQPNPKLDQAQHDLILKWLDEQPDKSVVFLCFGSMGVSFGPSQIREIALGLKHSGVRFLW 311 (463)
T ss_dssp HHHCTTSCCEEECCCCCCSSCCCBTTBCHHHHHHHHHHHHTSCTTCEEEEECCSSCCCCCHHHHHHHHHHHHHHTCEEEE
T ss_pred HhccccCCcEEEeCCCcccccccccccccccchhHHHHHhcCCCCceEEEEeccccccCCHHHHHHHHHHHHhCCCcEEE
Confidence 653 468999999986542 10 1 123467889999888899999999999 77888899999999999999999
Q ss_pred EEcCCcccccchhhhhhh--CCCceEeeccChHhhhcccCcceEEecCCchhHHHHHHcCCCeeccccccchhHHHHHH-
Q 012893 307 SFRGNAEEQLPKGFLERT--KSYGKVVPWAPQLKILEHSSVCVFVTHCGWNSTIEGITGGVPMVCRPVFADQALNQRII- 383 (454)
Q Consensus 307 ~~~~~~~~~l~~~~~~~~--~~nv~v~~~vp~~~ll~~~~~~~~I~HgG~gsv~eal~~GvP~i~~P~~~DQ~~nA~~v- 383 (454)
+++++ ...++++|.++. ++|+++++|+||..+|.|+++++||||||+||++||+++|||||++|+.+||+.||+++
T Consensus 312 ~~~~~-~~~l~~~~~~~~~~~~~~~v~~w~pq~~vL~h~~~~~fvth~G~~s~~Eal~~GvP~i~~P~~~dQ~~Na~~lv 390 (463)
T 2acv_A 312 SNSAE-KKVFPEGFLEWMELEGKGMICGWAPQVEVLAHKAIGGFVSHCGWNSILESMWFGVPILTWPIYAEQQLNAFRLV 390 (463)
T ss_dssp ECCCC-GGGSCTTHHHHHHHHCSEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHTTCCEEECCCSTTHHHHHHHHH
T ss_pred EECCC-cccCChhHHHhhccCCCEEEEccCCHHHHhCCCccCeEEecCCchhHHHHHHcCCCeeeccchhhhHHHHHHHH
Confidence 99974 123677777766 78999999999999999999999999999999999999999999999999999999995
Q ss_pred HHhhceeecC-c---CC--CCCHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHhc
Q 012893 384 ETAWGIGVGV-X---GE--KFTKDETVNALKQVLSSEEGKRMRENVGALKKLAFKAVESDGSSTKNFKALVEVVNM 453 (454)
Q Consensus 384 ~~~~G~G~~~-~---~~--~~~~~~l~~av~~vl~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 453 (454)
++. |+|+.+ + .+ .+++++|.++|+++|++. ++||+||+++++++++++.+||||..++++||+++.+
T Consensus 391 ~~~-g~g~~l~~~~~~~~~~~~~~~l~~ai~~ll~~~--~~~r~~a~~l~~~~~~a~~~gGss~~~l~~~v~~~~~ 463 (463)
T 2acv_A 391 KEW-GVGLGLRVDYRKGSDVVAAEEIEKGLKDLMDKD--SIVHKKVQEMKEMSRNAVVDGGSSLISVGKLIDDITG 463 (463)
T ss_dssp HTS-CCEEESCSSCCTTCCCCCHHHHHHHHHHHTCTT--CTHHHHHHHHHHHHHHHTSTTSHHHHHHHHHHHHHHC
T ss_pred HHc-CeEEEEecccCCCCccccHHHHHHHHHHHHhcc--HHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHhcC
Confidence 777 999999 3 34 689999999999999731 2899999999999999999999999999999999853
No 6
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=100.00 E-value=1.1e-44 Score=361.33 Aligned_cols=405 Identities=19% Similarity=0.209 Sum_probs=267.4
Q ss_pred cCCCCCcEEEEEcCCCccCHHHHHHHHHHHhhhcCCCcEEEEEEeCCCcCccccccccccCCCCeeEEeCCCCCCCCCCC
Q 012893 5 AGSTQRRHVAVLAFPFGTHAAPLLDLVRRLSEAALEEEVTFSFFSTAQSNGSLFMEKDELRDCKIVPYNVESGLPEGFRF 84 (454)
Q Consensus 5 ~~~~~~~~il~~~~~~~GH~~p~l~la~~L~~~~~G~~h~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 84 (454)
|++++|+||+|++++++||++|+++||++| +++| |+|+|++++.+.+.+.+. |++|++++++++.....
T Consensus 7 ~~~m~~~~Il~~~~~~~GHv~p~l~la~~L--~~~G--h~V~~~~~~~~~~~~~~~-------g~~~~~~~~~~~~~~~~ 75 (424)
T 2iya_A 7 SASVTPRHISFFNIPGHGHVNPSLGIVQEL--VARG--HRVSYAITDEFAAQVKAA-------GATPVVYDSILPKESNP 75 (424)
T ss_dssp ----CCCEEEEECCSCHHHHHHHHHHHHHH--HHTT--CEEEEEECGGGHHHHHHH-------TCEEEECCCCSCCTTCT
T ss_pred cCCcccceEEEEeCCCCcccchHHHHHHHH--HHCC--CeEEEEeCHHHHHHHHhC-------CCEEEecCccccccccc
Confidence 345678999999999999999999999999 8999 999999998887777777 89999998766543211
Q ss_pred CCCCcchHHHHHHhchHHHHHHHHHHHHhc-CCCccEEEEcCchhhHHHHHHHcCCCeEEEeCchhhhhhhhhchhHHHh
Q 012893 85 TGNPREPVEHFLKATPGNFVRALEKAVAKT-GLEISCLITDAFLWFAAEMAEEMRVPWIAYWTAGPRSLLAHVDSDIIRE 163 (454)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~pD~vi~d~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~ 163 (454)
..........+..............+.+.+ ..+||+||+|.+.+++..+|+++|||+|.+++.+..... +.+ .+..
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pD~VI~d~~~~~~~~~A~~lgIP~v~~~~~~~~~~~-~~~--~~~~ 152 (424)
T 2iya_A 76 EESWPEDQESAMGLFLDEAVRVLPQLEDAYADDRPDLIVYDIASWPAPVLGRKWDIPFVQLSPTFVAYEG-FEE--DVPA 152 (424)
T ss_dssp TCCCCSSHHHHHHHHHHHHHHHHHHHHHHTTTSCCSEEEEETTCTHHHHHHHHHTCCEEEEESSCCCCTT-HHH--HSGG
T ss_pred hhhcchhHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEcCcccHHHHHHHhcCCCEEEEecccccccc-ccc--cccc
Confidence 011111111111111122222223333333 348999999988888999999999999999876541110 000 0000
Q ss_pred -hhCCCCCCCCccccCCCCCcCCcCCCCCcc-cCCCCCCcHHHHHHHhcc------ccCCccEEEecCcccCCHHHHHHH
Q 012893 164 -IIGVNGPENQTLESIPGFSSIRAKDLPEGI-ISGPLDSPFPIMLDKMGK------TLPKATVVAINSYEELDPIVVETL 235 (454)
Q Consensus 164 -~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~l~~~~~~~~ 235 (454)
..+...... ....|...... ..+.... ......+.+.+++.+... ....++.++++++++++++.
T Consensus 153 ~~~~~~~~~~--~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~l~~~~---- 225 (424)
T 2iya_A 153 VQDPTADRGE--EAAAPAGTGDA-EEGAEAEDGLVRFFTRLSAFLEEHGVDTPATEFLIAPNRCIVALPRTFQIKG---- 225 (424)
T ss_dssp GSCCCC------------------------HHHHHHHHHHHHHHHHHTTCCSCHHHHHHCCSSEEESSCTTTSTTG----
T ss_pred cccccccccc--ccccccccccc-hhhhccchhHHHHHHHHHHHHHHcCCCCCHHHhccCCCcEEEEcchhhCCCc----
Confidence 000000000 00000000000 0000000 000000001111111100 00135678899999998741
Q ss_pred HhccCCeEEeccCCCCCCCCCCCCCCccchhccCCCCcEEEEeeCCCCCCCHHHHHHHHHHHHhcCCCEEEEEcCCcccc
Q 012893 236 KSRFRKFLNVGPSTLTSPPPVSDPHGCLPWLNEHENASVIYISFGSMITPPRAEVIALAEALEAIGFPFLWSFRGNAEEQ 315 (454)
Q Consensus 236 ~~~~~~~~~vGp~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 315 (454)
....+++++|||+..... +..+|++..+++++|||++||......+.+..+++++++.+.+++|.++.....
T Consensus 226 ~~~~~~~~~vGp~~~~~~-------~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~al~~~~~~~~~~~g~~~~~- 297 (424)
T 2iya_A 226 DTVGDNYTFVGPTYGDRS-------HQGTWEGPGDGRPVLLIALGSAFTDHLDFYRTCLSAVDGLDWHVVLSVGRFVDP- 297 (424)
T ss_dssp GGCCTTEEECCCCCCCCG-------GGCCCCCCCSSCCEEEEECCSSSCCCHHHHHHHHHHHTTCSSEEEEECCTTSCG-
T ss_pred cCCCCCEEEeCCCCCCcc-------cCCCCCccCCCCCEEEEEcCCCCcchHHHHHHHHHHHhcCCcEEEEEECCcCCh-
Confidence 233468999999764321 123577666677899999999986567888899999988889999988864321
Q ss_pred cchhhhhhhCCCceEeeccChHhhhcccCcceEEecCCchhHHHHHHcCCCeeccccccchhHHHHHHHHhhceeecCcC
Q 012893 316 LPKGFLERTKSYGKVVPWAPQLKILEHSSVCVFVTHCGWNSTIEGITGGVPMVCRPVFADQALNQRIIETAWGIGVGVXG 395 (454)
Q Consensus 316 l~~~~~~~~~~nv~v~~~vp~~~ll~~~~~~~~I~HgG~gsv~eal~~GvP~i~~P~~~DQ~~nA~~v~~~~G~G~~~~~ 395 (454)
+.+ +..++|+.+.+|+||..+|++++ +||||||+||++||+++|+|+|++|...||+.||+++++. |+|+.++.
T Consensus 298 --~~~-~~~~~~v~~~~~~~~~~~l~~~d--~~v~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~-g~g~~~~~ 371 (424)
T 2iya_A 298 --ADL-GEVPPNVEVHQWVPQLDILTKAS--AFITHAGMGSTMEALSNAVPMVAVPQIAEQTMNAERIVEL-GLGRHIPR 371 (424)
T ss_dssp --GGG-CSCCTTEEEESSCCHHHHHTTCS--EEEECCCHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHHT-TSEEECCG
T ss_pred --HHh-ccCCCCeEEecCCCHHHHHhhCC--EEEECCchhHHHHHHHcCCCEEEecCccchHHHHHHHHHC-CCEEEcCc
Confidence 111 12458999999999999999988 9999999999999999999999999999999999999999 99999987
Q ss_pred CCCCHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHh
Q 012893 396 EKFTKDETVNALKQVLSSEEGKRMRENVGALKKLAFKAVESDGSSTKNFKALVEVVN 452 (454)
Q Consensus 396 ~~~~~~~l~~av~~vl~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 452 (454)
+++++++|.++|+++++|+ +++++++++++++++ .+ +...+.++++.+.
T Consensus 372 ~~~~~~~l~~~i~~ll~~~---~~~~~~~~~~~~~~~----~~-~~~~~~~~i~~~~ 420 (424)
T 2iya_A 372 DQVTAEKLREAVLAVASDP---GVAERLAAVRQEIRE----AG-GARAAADILEGIL 420 (424)
T ss_dssp GGCCHHHHHHHHHHHHHCH---HHHHHHHHHHHHHHT----SC-HHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHcCH---HHHHHHHHHHHHHHh----cC-cHHHHHHHHHHHH
Confidence 7789999999999999987 899999999999876 23 3344444555443
No 7
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=100.00 E-value=1.7e-43 Score=349.84 Aligned_cols=361 Identities=15% Similarity=0.164 Sum_probs=234.6
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHhhhcCCCcEEEEEEeCCCcCccccccccccCCCCeeEEeCCCCCCCCC-----
Q 012893 8 TQRRHVAVLAFPFGTHAAPLLDLVRRLSEAALEEEVTFSFFSTAQSNGSLFMEKDELRDCKIVPYNVESGLPEGF----- 82 (454)
Q Consensus 8 ~~~~~il~~~~~~~GH~~p~l~la~~L~~~~~G~~h~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~----- 82 (454)
.+.|||||+++|++||++|+++||++| +++| |+|+|++++.+.+.. +. |+.+.++.++.....
T Consensus 20 ~~~MRIL~~~~p~~GHv~P~l~LA~~L--~~rG--h~Vt~~t~~~~~~~~-~~-------g~~~~~~~~~~~~~~~~~~~ 87 (400)
T 4amg_A 20 FQSMRALFITSPGLSHILPTVPLAQAL--RALG--HEVRYATGGDIRAVA-EA-------GLCAVDVSPGVNYAKLFVPD 87 (400)
T ss_dssp -CCCEEEEECCSSHHHHGGGHHHHHHH--HHTT--CEEEEEECSSTHHHH-TT-------TCEEEESSTTCCSHHHHSCC
T ss_pred CCCCeEEEECCCchhHHHHHHHHHHHH--HHCC--CEEEEEeCcchhhHH-hc-------CCeeEecCCchhHhhhcccc
Confidence 456899999999999999999999999 9999 999999998765533 34 788888753332110
Q ss_pred -----CCCCCC---cchHHHHHHhchHHHHHHHHHHHHhcCCCccEEEEcCchhhHHHHHHHcCCCeEEEeCchhhhhhh
Q 012893 83 -----RFTGNP---REPVEHFLKATPGNFVRALEKAVAKTGLEISCLITDAFLWFAAEMAEEMRVPWIAYWTAGPRSLLA 154 (454)
Q Consensus 83 -----~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pD~vi~d~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~ 154 (454)
...... ...+...+..........+.++++.. +||+||+|...+++..+|+.+|||++.+...+......
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~pD~Vv~d~~~~~~~~~A~~~gip~~~~~~~~~~~~~~ 165 (400)
T 4amg_A 88 DTDVTDPMHSEGLGEGFFAEMFARVSAVAVDGALRTARSW--RPDLVVHTPTQGAGPLTAAALQLPCVELPLGPADSEPG 165 (400)
T ss_dssp C------------CHHHHHHHHHHHHHHHHHHHHHHHHHH--CCSEEEECTTCTHHHHHHHHTTCCEEECCSSTTTCCHH
T ss_pred ccccccccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHhc--CCCEEEECcchHHHHHHHHHcCCCceeecccccccccc
Confidence 000000 11111111111112222233344444 89999999999999999999999999986654332221
Q ss_pred hhchhHHHhhhCCCCCCCCccccCCCCCcCCcCCCCCcccCCCCCCcHHHHHHHhccccCC-ccEEEecCcccCCHHHHH
Q 012893 155 HVDSDIIREIIGVNGPENQTLESIPGFSSIRAKDLPEGIISGPLDSPFPIMLDKMGKTLPK-ATVVAINSYEELDPIVVE 233 (454)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~ 233 (454)
.... .... +.+...+....... ....+... + +. ..
T Consensus 166 ~~~~--~~~~-------------------------------------l~~~~~~~~~~~~~~~~~~~~~~-~---~~-~~ 201 (400)
T 4amg_A 166 LGAL--IRRA-------------------------------------MSKDYERHGVTGEPTGSVRLTTT-P---PS-VE 201 (400)
T ss_dssp HHHH--HHHH-------------------------------------THHHHHHTTCCCCCSCEEEEECC-C---HH-HH
T ss_pred hhhH--HHHH-------------------------------------HHHHHHHhCCCcccccchhhccc-C---ch-hh
Confidence 1100 0000 00111111110011 11111111 1 10 00
Q ss_pred HHH--h-ccCCeEEeccCCCCCCCCCCCCCCccchhccCCCCcEEEEeeCCCCCCC--HHHHHHHHHHHHhcCCCEEEEE
Q 012893 234 TLK--S-RFRKFLNVGPSTLTSPPPVSDPHGCLPWLNEHENASVIYISFGSMITPP--RAEVIALAEALEAIGFPFLWSF 308 (454)
Q Consensus 234 ~~~--~-~~~~~~~vGp~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~--~~~~~~~~~~~~~~~~~~i~~~ 308 (454)
... . ..+......+.... ....+..|++..+++++|||+|||+.... ...+..+++++++.+.+++|..
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~~~~l~~~~~~~v~~~ 275 (400)
T 4amg_A 202 ALLPEDRRSPGAWPMRYVPYN------GGAVLPDWLPPAAGRRRIAVTLGSIDALSGGIAKLAPLFSEVADVDAEFVLTL 275 (400)
T ss_dssp HTSCGGGCCTTCEECCCCCCC------CCEECCTTCSCCTTCCEEEECCCSCC--CCSSSTTHHHHHHGGGSSSEEEEEC
T ss_pred ccCcccccCCcccCccccccc------ccccCcccccccCCCcEEEEeCCcccccCccHHHHHHHHHHhhccCceEEEEe
Confidence 000 0 11222222222211 11223468888889999999999987543 3567889999999999999998
Q ss_pred cCCcccccchhhhhhhCCCceEeeccChHhhhcccCcceEEecCCchhHHHHHHcCCCeeccccccchhHHHHHHHHhhc
Q 012893 309 RGNAEEQLPKGFLERTKSYGKVVPWAPQLKILEHSSVCVFVTHCGWNSTIEGITGGVPMVCRPVFADQALNQRIIETAWG 388 (454)
Q Consensus 309 ~~~~~~~l~~~~~~~~~~nv~v~~~vp~~~ll~~~~~~~~I~HgG~gsv~eal~~GvP~i~~P~~~DQ~~nA~~v~~~~G 388 (454)
++...... ...++|+.+.+|+||.++|++++ +||||||+||++||+++|||+|++|+.+||+.||+++++. |
T Consensus 276 ~~~~~~~~-----~~~~~~v~~~~~~p~~~lL~~~~--~~v~h~G~~s~~Eal~~GvP~v~~P~~~dQ~~na~~v~~~-G 347 (400)
T 4amg_A 276 GGGDLALL-----GELPANVRVVEWIPLGALLETCD--AIIHHGGSGTLLTALAAGVPQCVIPHGSYQDTNRDVLTGL-G 347 (400)
T ss_dssp CTTCCCCC-----CCCCTTEEEECCCCHHHHHTTCS--EEEECCCHHHHHHHHHHTCCEEECCC---CHHHHHHHHHH-T
T ss_pred cCcccccc-----ccCCCCEEEEeecCHHHHhhhhh--heeccCCccHHHHHHHhCCCEEEecCcccHHHHHHHHHHC-C
Confidence 87653322 13468999999999999999987 9999999999999999999999999999999999999999 9
Q ss_pred eeecCcCCCCCHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHh
Q 012893 389 IGVGVXGEKFTKDETVNALKQVLSSEEGKRMRENVGALKKLAFKAVESDGSSTKNFKALVEVVN 452 (454)
Q Consensus 389 ~G~~~~~~~~~~~~l~~av~~vl~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 452 (454)
+|+.++..+.++ ++|+++|+|+ +||+||++++++++. ..+...+.+.++.|.
T Consensus 348 ~g~~l~~~~~~~----~al~~lL~d~---~~r~~a~~l~~~~~~-----~~~~~~~a~~le~lA 399 (400)
T 4amg_A 348 IGFDAEAGSLGA----EQCRRLLDDA---GLREAALRVRQEMSE-----MPPPAETAAXLVALA 399 (400)
T ss_dssp SEEECCTTTCSH----HHHHHHHHCH---HHHHHHHHHHHHHHT-----SCCHHHHHHHHHHHC
T ss_pred CEEEcCCCCchH----HHHHHHHcCH---HHHHHHHHHHHHHHc-----CCCHHHHHHHHHHhh
Confidence 999998776665 4677899997 999999999999987 223456666777664
No 8
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=100.00 E-value=2.3e-43 Score=350.71 Aligned_cols=384 Identities=14% Similarity=0.105 Sum_probs=257.8
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHhhhcCCCcEEEEEEeCCCcCccccccccccCCCCeeEEeCCCCCCCCCCCCCCCcc
Q 012893 11 RHVAVLAFPFGTHAAPLLDLVRRLSEAALEEEVTFSFFSTAQSNGSLFMEKDELRDCKIVPYNVESGLPEGFRFTGNPRE 90 (454)
Q Consensus 11 ~~il~~~~~~~GH~~p~l~la~~L~~~~~G~~h~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 90 (454)
|||+|+++++.||++|+++||++| +++| |+|+|++++.+.+.+.+. |++|++++...............
T Consensus 1 M~Il~~~~~~~GHv~P~l~la~~L--~~~G--h~V~~~~~~~~~~~v~~~-------g~~~~~i~~~~~~~~~~~~~~~~ 69 (415)
T 1iir_A 1 MRVLLATCGSRGDTEPLVALAVRV--RDLG--ADVRMCAPPDCAERLAEV-------GVPHVPVGPSARAPIQRAKPLTA 69 (415)
T ss_dssp CEEEEECCSCHHHHHHHHHHHHHH--HHTT--CEEEEEECGGGHHHHHHT-------TCCEEECCC-------CCSCCCH
T ss_pred CeEEEEcCCCchhHHHHHHHHHHH--HHCC--CeEEEEcCHHHHHHHHHc-------CCeeeeCCCCHHHHhhcccccch
Confidence 699999999999999999999999 8899 999999998876666666 89999998543221111111111
Q ss_pred hHHHHHHhchHHHHHHHHHHHHhcCCCccEEEEcC-chhh--HHHHHHHcCCCeEEEeCchhhhhhhhhchhHHHhhhCC
Q 012893 91 PVEHFLKATPGNFVRALEKAVAKTGLEISCLITDA-FLWF--AAEMAEEMRVPWIAYWTAGPRSLLAHVDSDIIREIIGV 167 (454)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~pD~vi~d~-~~~~--~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (454)
..+.........+.++.+.+. ..+||+||+|. +..+ +..+|+.+|||+|.+.+.+......+.+....
T Consensus 70 --~~~~~~~~~~~~~~~~~l~~~-~~~pD~vi~d~~~~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~p~~~~------ 140 (415)
T 1iir_A 70 --EDVRRFTTEAIATQFDEIPAA-AEGCAAVVTTGLLAAAIGVRSVAEKLGIPYFYAFHCPSYVPSPYYPPPPL------ 140 (415)
T ss_dssp --HHHHHHHHHHHHHHHHHHHHH-TTTCSEEEEESCHHHHHHHHHHHHHHTCCEEEEESSGGGSCCSSSCCCC-------
T ss_pred --HHHHHHHHHHHHHHHHHHHHH-hcCCCEEEECChhHhHhhHHHHHHHhCCCEEEEecCCCcCCCcccCCccC------
Confidence 111111111223344444431 34899999997 6778 88999999999999987664332211100000
Q ss_pred CCCCCCccccCCCCCcCCcCCCCCcccCCCCCCcHHHHHHHhccc--c----------CCccEEEecCcccCCH-HHHHH
Q 012893 168 NGPENQTLESIPGFSSIRAKDLPEGIISGPLDSPFPIMLDKMGKT--L----------PKATVVAINSYEELDP-IVVET 234 (454)
Q Consensus 168 ~~~~~~~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~--~----------~~~~~~~~~~~~~l~~-~~~~~ 234 (454)
... +|+- ...+.+............+...+...... + ... .+++++++.+++ +
T Consensus 141 ------~~~-~~~~--~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~l~~~~~~l~~~~---- 206 (415)
T 1iir_A 141 ------GEP-STQD--TIDIPAQWERNNQSAYQRYGGLLNSHRDAIGLPPVEDIFTFGYTD-HPWVAADPVLAPLQ---- 206 (415)
T ss_dssp -----------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHCS-SCEECSCTTTSCCC----
T ss_pred ------Ccc-ccch--HHHHHHHHHHHHHHHHHHhHHHHHHHHHHcCCCCCCccccccCCC-CEEEeeChhhcCCC----
Confidence 000 0000 00000000000000000000000001000 0 112 578889998875 3
Q ss_pred HHhccCCeEEeccCCCCCCCCCCCCCCccchhccCCCCcEEEEeeCCCCCCCHHHHHHHHHHHHhcCCCEEEEEcCCccc
Q 012893 235 LKSRFRKFLNVGPSTLTSPPPVSDPHGCLPWLNEHENASVIYISFGSMITPPRAEVIALAEALEAIGFPFLWSFRGNAEE 314 (454)
Q Consensus 235 ~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 314 (454)
...+ ++++|||+..... .+.+.++.+|++.. +++|||++||+. .....+..+++++++.+.+++|++|+....
T Consensus 207 -~~~~-~~~~vG~~~~~~~--~~~~~~~~~~l~~~--~~~v~v~~Gs~~-~~~~~~~~~~~al~~~~~~~v~~~g~~~~~ 279 (415)
T 1iir_A 207 -PTDL-DAVQTGAWILPDE--RPLSPELAAFLDAG--PPPVYLGFGSLG-APADAVRVAIDAIRAHGRRVILSRGWADLV 279 (415)
T ss_dssp -CCSS-CCEECCCCCCCCC--CCCCHHHHHHHHTS--SCCEEEECC----CCHHHHHHHHHHHHHTTCCEEECTTCTTCC
T ss_pred -cccC-CeEeeCCCccCcc--cCCCHHHHHHHhhC--CCeEEEeCCCCC-CcHHHHHHHHHHHHHCCCeEEEEeCCCccc
Confidence 2333 8999999886533 22344677898754 479999999997 567788889999999999999998865422
Q ss_pred ccchhhhhhhCCCceEeeccChHhhhcccCcceEEecCCchhHHHHHHcCCCeeccccccchhHHHHHHHHhhceeecCc
Q 012893 315 QLPKGFLERTKSYGKVVPWAPQLKILEHSSVCVFVTHCGWNSTIEGITGGVPMVCRPVFADQALNQRIIETAWGIGVGVX 394 (454)
Q Consensus 315 ~l~~~~~~~~~~nv~v~~~vp~~~ll~~~~~~~~I~HgG~gsv~eal~~GvP~i~~P~~~DQ~~nA~~v~~~~G~G~~~~ 394 (454)
. ...++|+.+.+|+||.++|++++ +||||||+||++||+++|+|+|++|..+||..||+++++. |+|+.++
T Consensus 280 -~-----~~~~~~v~~~~~~~~~~~l~~~d--~~v~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~-g~g~~~~ 350 (415)
T 1iir_A 280 -L-----PDDGADCFAIGEVNHQVLFGRVA--AVIHHGGAGTTHVAARAGAPQILLPQMADQPYYAGRVAEL-GVGVAHD 350 (415)
T ss_dssp -C-----SSCGGGEEECSSCCHHHHGGGSS--EEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHH-TSEEECS
T ss_pred -c-----cCCCCCEEEeCcCChHHHHhhCC--EEEeCCChhHHHHHHHcCCCEEECCCCCccHHHHHHHHHC-CCcccCC
Confidence 1 12347899999999999997766 9999999999999999999999999999999999999999 9999998
Q ss_pred CCCCCHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHhc
Q 012893 395 GEKFTKDETVNALKQVLSSEEGKRMRENVGALKKLAFKAVESDGSSTKNFKALVEVVNM 453 (454)
Q Consensus 395 ~~~~~~~~l~~av~~vl~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 453 (454)
..+++.++|.++|+++ +|+ ++++++++++++++. ..+...+.++++.+.+
T Consensus 351 ~~~~~~~~l~~~i~~l-~~~---~~~~~~~~~~~~~~~-----~~~~~~~~~~i~~~~~ 400 (415)
T 1iir_A 351 GPIPTFDSLSAALATA-LTP---ETHARATAVAGTIRT-----DGAAVAARLLLDAVSR 400 (415)
T ss_dssp SSSCCHHHHHHHHHHH-TSH---HHHHHHHHHHHHSCS-----CHHHHHHHHHHHHHHT
T ss_pred cCCCCHHHHHHHHHHH-cCH---HHHHHHHHHHHHHhh-----cChHHHHHHHHHHHHh
Confidence 7778999999999999 886 899999999988764 4455677777777654
No 9
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=100.00 E-value=1.2e-41 Score=338.46 Aligned_cols=385 Identities=15% Similarity=0.100 Sum_probs=258.3
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHhhhcCCCcEEEEEEeCCCcCccccccccccCCCCeeEEeCCCCCCCCCCC-CCCCc
Q 012893 11 RHVAVLAFPFGTHAAPLLDLVRRLSEAALEEEVTFSFFSTAQSNGSLFMEKDELRDCKIVPYNVESGLPEGFRF-TGNPR 89 (454)
Q Consensus 11 ~~il~~~~~~~GH~~p~l~la~~L~~~~~G~~h~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~ 89 (454)
|||+|+++++.||++|+++||++| +++| |+|+|++++.+.+.+.+. |++|++++......... .....
T Consensus 1 MrIl~~~~~~~GH~~p~l~la~~L--~~~G--h~V~~~~~~~~~~~v~~~-------g~~~~~~~~~~~~~~~~~~~~~~ 69 (416)
T 1rrv_A 1 MRVLLSVCGTRGDVEIGVALADRL--KALG--VQTRMCAPPAAEERLAEV-------GVPHVPVGLPQHMMLQEGMPPPP 69 (416)
T ss_dssp CEEEEEEESCHHHHHHHHHHHHHH--HHTT--CEEEEEECGGGHHHHHHH-------TCCEEECSCCGGGCCCTTSCCCC
T ss_pred CeEEEEecCCCccHHHHHHHHHHH--HHCC--CeEEEEeCHHHHHHHHHc-------CCeeeecCCCHHHHHhhccccch
Confidence 699999999999999999999999 8999 999999998776677766 89999998543211111 01111
Q ss_pred c-hHHHHHHhchHHHHHHHHHHHHhcCCCccEEEEcC-chhh--HHHHHHHcCCCeEEEeCchhhhhhhhhchhHHHhhh
Q 012893 90 E-PVEHFLKATPGNFVRALEKAVAKTGLEISCLITDA-FLWF--AAEMAEEMRVPWIAYWTAGPRSLLAHVDSDIIREII 165 (454)
Q Consensus 90 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~pD~vi~d~-~~~~--~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~ 165 (454)
. .+..+.. ....+.++.+.+. ..+||+||+|. ..++ +..+|+.+|||+|.+.+.+.+....+.+ ...
T Consensus 70 ~~~~~~~~~---~~~~~~~~~l~~~-~~~pD~vi~d~~~~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~p-----~~~ 140 (416)
T 1rrv_A 70 PEEEQRLAA---MTVEMQFDAVPGA-AEGCAAVVAVGDLAAATGVRSVAEKLGLPFFYSVPSPVYLASPHLP-----PAY 140 (416)
T ss_dssp HHHHHHHHH---HHHHHHHHHHHHH-TTTCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSCCSSSC-----CCB
T ss_pred hHHHHHHHH---HHHHHHHHHHHHH-hcCCCEEEEcCchHHHHHHHHHHHHcCCCEEEEeCCCCCCCCcccC-----CCC
Confidence 1 1111111 1123333333321 34899999996 5666 8889999999999988765332111110 000
Q ss_pred CCCCCCCCccccCCC-CCcCCcCCCCCcccCCCCCCcHHHHHHHhc--------cccCCccEEEecCcccCCHHHHHHHH
Q 012893 166 GVNGPENQTLESIPG-FSSIRAKDLPEGIISGPLDSPFPIMLDKMG--------KTLPKATVVAINSYEELDPIVVETLK 236 (454)
Q Consensus 166 ~~~~~~~~~~~~~p~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~l~~~~~~~~~ 236 (454)
+ +...++ ........+......+.......++..... +..... .+++++.++++++ .
T Consensus 141 ~--------~~~~~~r~~n~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~l~~~~~~l~~~-----~ 206 (416)
T 1rrv_A 141 D--------EPTTPGVTDIRVLWEERAARFADRYGPTLNRRRAEIGLPPVEDVFGYGHGE-RPLLAADPVLAPL-----Q 206 (416)
T ss_dssp C--------SCCCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCSCHHHHTTCS-SCEECSCTTTSCC-----C
T ss_pred C--------CCCCchHHHHHHHHHHHHHHHHHHhHHHHHHHHHHcCCCCCCchhhhccCC-CeEEccCccccCC-----C
Confidence 0 000011 000000000000000000000001110110 001123 6788998988763 2
Q ss_pred hccCCeEEeccCCCCCCCCCCCCCCccchhccCCCCcEEEEeeCCCCC-CCHHHHHHHHHHHHhcCCCEEEEEcCCcccc
Q 012893 237 SRFRKFLNVGPSTLTSPPPVSDPHGCLPWLNEHENASVIYISFGSMIT-PPRAEVIALAEALEAIGFPFLWSFRGNAEEQ 315 (454)
Q Consensus 237 ~~~~~~~~vGp~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 315 (454)
..+ ++++|||+..+.. .+.+.++.+|++.. +++|||++||+.. .....+..+++++++.+.+++|++|+....
T Consensus 207 ~~~-~~~~vG~~~~~~~--~~~~~~~~~~l~~~--~~~v~v~~Gs~~~~~~~~~~~~~~~al~~~~~~~v~~~g~~~~~- 280 (416)
T 1rrv_A 207 PDV-DAVQTGAWLLSDE--RPLPPELEAFLAAG--SPPVHIGFGSSSGRGIADAAKVAVEAIRAQGRRVILSRGWTELV- 280 (416)
T ss_dssp SSC-CCEECCCCCCCCC--CCCCHHHHHHHHSS--SCCEEECCTTCCSHHHHHHHHHHHHHHHHTTCCEEEECTTTTCC-
T ss_pred CCC-CeeeECCCccCcc--CCCCHHHHHHHhcC--CCeEEEecCCCCccChHHHHHHHHHHHHHCCCeEEEEeCCcccc-
Confidence 223 8999999876543 22344577898754 4799999999964 245667889999999999999998876422
Q ss_pred cchhhhhhhCCCceEeeccChHhhhcccCcceEEecCCchhHHHHHHcCCCeeccccccchhHHHHHHHHhhceeecCcC
Q 012893 316 LPKGFLERTKSYGKVVPWAPQLKILEHSSVCVFVTHCGWNSTIEGITGGVPMVCRPVFADQALNQRIIETAWGIGVGVXG 395 (454)
Q Consensus 316 l~~~~~~~~~~nv~v~~~vp~~~ll~~~~~~~~I~HgG~gsv~eal~~GvP~i~~P~~~DQ~~nA~~v~~~~G~G~~~~~ 395 (454)
. +..++|+.+.+|+||.++|++++ +||||||+||++||+++|+|+|++|...||+.||+++++. |+|+.++.
T Consensus 281 ~-----~~~~~~v~~~~~~~~~~ll~~~d--~~v~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~-g~g~~~~~ 352 (416)
T 1rrv_A 281 L-----PDDRDDCFAIDEVNFQALFRRVA--AVIHHGSAGTEHVATRAGVPQLVIPRNTDQPYFAGRVAAL-GIGVAHDG 352 (416)
T ss_dssp C-----SCCCTTEEEESSCCHHHHGGGSS--EEEECCCHHHHHHHHHHTCCEEECCCSBTHHHHHHHHHHH-TSEEECSS
T ss_pred c-----cCCCCCEEEeccCChHHHhccCC--EEEecCChhHHHHHHHcCCCEEEccCCCCcHHHHHHHHHC-CCccCCCC
Confidence 1 22457999999999999997776 9999999999999999999999999999999999999999 99999987
Q ss_pred CCCCHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHH-HHHhc
Q 012893 396 EKFTKDETVNALKQVLSSEEGKRMRENVGALKKLAFKAVESDGSSTKNFKALV-EVVNM 453 (454)
Q Consensus 396 ~~~~~~~l~~av~~vl~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 453 (454)
.+.+.++|.++|+++ +|+ +|+++++++++++++ .++. .+.+++ +.+.+
T Consensus 353 ~~~~~~~l~~~i~~l-~~~---~~~~~~~~~~~~~~~----~~~~--~~~~~i~e~~~~ 401 (416)
T 1rrv_A 353 PTPTFESLSAALTTV-LAP---ETRARAEAVAGMVLT----DGAA--AAADLVLAAVGR 401 (416)
T ss_dssp SCCCHHHHHHHHHHH-TSH---HHHHHHHHHTTTCCC----CHHH--HHHHHHHHHHHC
T ss_pred CCCCHHHHHHHHHHh-hCH---HHHHHHHHHHHHHhh----cCcH--HHHHHHHHHHhc
Confidence 778999999999999 886 899999999988775 2333 455555 76654
No 10
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=100.00 E-value=1.8e-40 Score=329.92 Aligned_cols=381 Identities=17% Similarity=0.184 Sum_probs=263.3
Q ss_pred CCCCcEEEEEcCCCccCHHHHHHHHHHHhhhcCCCcEEEEEEeCCCcCccccccccccCCCCeeEEeCCCCCCCCCC---
Q 012893 7 STQRRHVAVLAFPFGTHAAPLLDLVRRLSEAALEEEVTFSFFSTAQSNGSLFMEKDELRDCKIVPYNVESGLPEGFR--- 83 (454)
Q Consensus 7 ~~~~~~il~~~~~~~GH~~p~l~la~~L~~~~~G~~h~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--- 83 (454)
..+|+||+|+++++.||++|+++||++| +++| |+|+|++++.+.+.+++. |+++.+++..++....
T Consensus 17 ~~~m~rIl~~~~~~~GHv~p~l~La~~L--~~~G--h~V~v~~~~~~~~~~~~~-------G~~~~~~~~~~~~~~~~~~ 85 (415)
T 3rsc_A 17 GRHMAHLLIVNVASHGLILPTLTVVTEL--VRRG--HRVSYVTAGGFAEPVRAA-------GATVVPYQSEIIDADAAEV 85 (415)
T ss_dssp --CCCEEEEECCSCHHHHGGGHHHHHHH--HHTT--CEEEEEECGGGHHHHHHT-------TCEEEECCCSTTTCCHHHH
T ss_pred cccCCEEEEEeCCCccccccHHHHHHHH--HHCC--CEEEEEeCHHHHHHHHhc-------CCEEEeccccccccccchh
Confidence 4568999999999999999999999999 9999 999999998888888777 8999999855443211
Q ss_pred -CCCCCcchHHH-HHHhchHHHHHHHHHHHHhcCCCccEEEEc-CchhhHHHHHHHcCCCeEEEeCchhhhhhhhhchhH
Q 012893 84 -FTGNPREPVEH-FLKATPGNFVRALEKAVAKTGLEISCLITD-AFLWFAAEMAEEMRVPWIAYWTAGPRSLLAHVDSDI 160 (454)
Q Consensus 84 -~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~pD~vi~d-~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~ 160 (454)
...+....+.. +...... ....+.++++. .+||+||+| ...+++..+|+.+|||++.+.+..... ..+.....
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~-~~~~l~~~l~~--~~PDlVi~d~~~~~~~~~aA~~~giP~v~~~~~~~~~-~~~~~~~~ 161 (415)
T 3rsc_A 86 FGSDDLGVRPHLMYLRENVS-VLRATAEALDG--DVPDLVLYDDFPFIAGQLLAARWRRPAVRLSAAFASN-EHYSFSQD 161 (415)
T ss_dssp HHSSSSCHHHHHHHHHHHHH-HHHHHHHHHSS--SCCSEEEEESTTHHHHHHHHHHTTCCEEEEESSCCCC-SSCCHHHH
T ss_pred hccccHHHHHHHHHHHHHHH-HHHHHHHHHhc--cCCCEEEECchhhhHHHHHHHHhCCCEEEEEeccccc-Cccccccc
Confidence 01112222222 2222211 12223333343 499999999 888889999999999999987543221 00000000
Q ss_pred HHhhhCCCCCCCCccccCCCCCcCCcCCCCCcccCCCCCCcHHHHHHHhccc------cC-CccEEEecCcccCCHHHHH
Q 012893 161 IREIIGVNGPENQTLESIPGFSSIRAKDLPEGIISGPLDSPFPIMLDKMGKT------LP-KATVVAINSYEELDPIVVE 233 (454)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~------~~-~~~~~~~~~~~~l~~~~~~ 233 (454)
........ .|.. .. .....+.+++...... .. ..+..+....+.+++.
T Consensus 162 ~~~~~~~~---------~p~~--------~~-----~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~--- 216 (415)
T 3rsc_A 162 MVTLAGTI---------DPLD--------LP-----VFRDTLRDLLAEHGLSRSVVDCWNHVEQLNLVFVPKAFQIA--- 216 (415)
T ss_dssp HHHHHTCC---------CGGG--------CH-----HHHHHHHHHHHHTTCCCCHHHHHTCCCSEEEESSCTTTSTT---
T ss_pred cccccccC---------Chhh--------HH-----HHHHHHHHHHHHcCCCCChhhhhcCCCCeEEEEcCcccCCC---
Confidence 00000000 0000 00 0000011111111000 01 1266676676766654
Q ss_pred HHHhcc-CCeEEeccCCCCCCCCCCCCCCccchhccCCCCcEEEEeeCCCCCCCHHHHHHHHHHHHhcCCCEEEEEcCCc
Q 012893 234 TLKSRF-RKFLNVGPSTLTSPPPVSDPHGCLPWLNEHENASVIYISFGSMITPPRAEVIALAEALEAIGFPFLWSFRGNA 312 (454)
Q Consensus 234 ~~~~~~-~~~~~vGp~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 312 (454)
...+ .++.++||+..... +...|....+++++|||++||........+..+++++++.+.+++|.++...
T Consensus 217 --~~~~~~~~~~vGp~~~~~~-------~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~al~~~~~~~v~~~g~~~ 287 (415)
T 3rsc_A 217 --GDTFDDRFVFVGPCFDDRR-------FLGEWTRPADDLPVVLVSLGTTFNDRPGFFRDCARAFDGQPWHVVMTLGGQV 287 (415)
T ss_dssp --GGGCCTTEEECCCCCCCCG-------GGCCCCCCSSCCCEEEEECTTTSCCCHHHHHHHHHHHTTSSCEEEEECTTTS
T ss_pred --cccCCCceEEeCCCCCCcc-------cCcCccccCCCCCEEEEECCCCCCChHHHHHHHHHHHhcCCcEEEEEeCCCC
Confidence 4443 57999999875422 1234665556788999999999877778889999999988899999888652
Q ss_pred ccccchhhhhhhCCCceEeeccChHhhhcccCcceEEecCCchhHHHHHHcCCCeeccccccchhHHHHHHHHhhceeec
Q 012893 313 EEQLPKGFLERTKSYGKVVPWAPQLKILEHSSVCVFVTHCGWNSTIEGITGGVPMVCRPVFADQALNQRIIETAWGIGVG 392 (454)
Q Consensus 313 ~~~l~~~~~~~~~~nv~v~~~vp~~~ll~~~~~~~~I~HgG~gsv~eal~~GvP~i~~P~~~DQ~~nA~~v~~~~G~G~~ 392 (454)
.. +.+ +..++|+.+.+|+|+..+|++++ ++|||||+||++||+++|+|+|++|...||+.||.++++. |+|+.
T Consensus 288 ~~---~~l-~~~~~~v~~~~~~~~~~ll~~ad--~~v~~~G~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~l~~~-g~g~~ 360 (415)
T 3rsc_A 288 DP---AAL-GDLPPNVEAHRWVPHVKVLEQAT--VCVTHGGMGTLMEALYWGRPLVVVPQSFDVQPMARRVDQL-GLGAV 360 (415)
T ss_dssp CG---GGG-CCCCTTEEEESCCCHHHHHHHEE--EEEESCCHHHHHHHHHTTCCEEECCCSGGGHHHHHHHHHH-TCEEE
T ss_pred Ch---HHh-cCCCCcEEEEecCCHHHHHhhCC--EEEECCcHHHHHHHHHhCCCEEEeCCcchHHHHHHHHHHc-CCEEE
Confidence 21 111 23458999999999999999877 9999999999999999999999999999999999999999 99999
Q ss_pred CcCCCCCHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHH
Q 012893 393 VXGEKFTKDETVNALKQVLSSEEGKRMRENVGALKKLAFKAVESDGSSTKNFKALVEVV 451 (454)
Q Consensus 393 ~~~~~~~~~~l~~av~~vl~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 451 (454)
+..++++++.|.++|.++++|+ +++++++++++++.+ .+++ ..+.+.++.+
T Consensus 361 ~~~~~~~~~~l~~~i~~ll~~~---~~~~~~~~~~~~~~~----~~~~-~~~~~~i~~~ 411 (415)
T 3rsc_A 361 LPGEKADGDTLLAAVGAVAADP---ALLARVEAMRGHVRR----AGGA-ARAADAVEAY 411 (415)
T ss_dssp CCGGGCCHHHHHHHHHHHHTCH---HHHHHHHHHHHHHHH----SCHH-HHHHHHHHHH
T ss_pred cccCCCCHHHHHHHHHHHHcCH---HHHHHHHHHHHHHHh----cCHH-HHHHHHHHHH
Confidence 9888889999999999999997 999999999999887 3444 4444444444
No 11
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=100.00 E-value=2e-41 Score=335.30 Aligned_cols=373 Identities=17% Similarity=0.132 Sum_probs=253.0
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHhhhcCCCcEEEEEEeCCCcCccccccccccCCCCeeEEeCCCCCCCCCC-CCCCCc
Q 012893 11 RHVAVLAFPFGTHAAPLLDLVRRLSEAALEEEVTFSFFSTAQSNGSLFMEKDELRDCKIVPYNVESGLPEGFR-FTGNPR 89 (454)
Q Consensus 11 ~~il~~~~~~~GH~~p~l~la~~L~~~~~G~~h~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~~~~ 89 (454)
|||+|++.++.||++|+++||++| +++| |+|+|++++.+.+.+++. |++|.+++........ ......
T Consensus 1 MrIli~~~gt~Ghv~p~~~La~~L--~~~G--h~V~v~~~~~~~~~v~~~-------g~~~~~l~~~~~~~~~~~~~~~~ 69 (404)
T 3h4t_A 1 MGVLITGCGSRGDTEPLVALAARL--RELG--ADARMCLPPDYVERCAEV-------GVPMVPVGRAVRAGAREPGELPP 69 (404)
T ss_dssp -CEEEEEESSHHHHHHHHHHHHHH--HHTT--CCEEEEECGGGHHHHHHT-------TCCEEECSSCSSGGGSCTTCCCT
T ss_pred CeEEEEeCCCCccHHHHHHHHHHH--HHCC--CeEEEEeCHHHHHHHHHc-------CCceeecCCCHHHHhccccCCHH
Confidence 699999999999999999999999 9999 999999998888888777 8999999743321100 001111
Q ss_pred chHHHHHHhchHHHHHHHHHHHHhcCCCccEEEEcCchhhH---HHHHHHcCCCeEEEeCchhhhhhhhhchhH-HHhhh
Q 012893 90 EPVEHFLKATPGNFVRALEKAVAKTGLEISCLITDAFLWFA---AEMAEEMRVPWIAYWTAGPRSLLAHVDSDI-IREII 165 (454)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~pD~vi~d~~~~~~---~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~-~~~~~ 165 (454)
.....+. ..+.+.++.+.+.. .+||+||.|.....+ ..+|+.+|||++.+...+........+... .....
T Consensus 70 ~~~~~~~----~~~~~~~~~l~~~~-~~pD~Vi~~~~~~~~~~a~~~A~~lgiP~v~~~~~p~~~~~~~~~~~~~~~~~~ 144 (404)
T 3h4t_A 70 GAAEVVT----EVVAEWFDKVPAAI-EGCDAVVTTGLLPAAVAVRSMAEKLGIPYRYTVLSPDHLPSEQSQAERDMYNQG 144 (404)
T ss_dssp TCGGGHH----HHHHHHHHHHHHHH-TTCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSGGGSCHHHHHHHHHH
T ss_pred HHHHHHH----HHHHHHHHHHHHHh-cCCCEEEECCchhhhhhhhhHHhhcCCCEEEEEcCCccCCChhHHHHHHHHHHH
Confidence 1111111 11222222222211 379999988554433 789999999999988776532222110000 00000
Q ss_pred CCCCCCCCccc---cCCCCCcCCcCCCCCcccCCCCCCcHHHHHHHhccccCCccEEEecCcccCCHHHHHHHHhccCCe
Q 012893 166 GVNGPENQTLE---SIPGFSSIRAKDLPEGIISGPLDSPFPIMLDKMGKTLPKATVVAINSYEELDPIVVETLKSRFRKF 242 (454)
Q Consensus 166 ~~~~~~~~~~~---~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 242 (454)
. +......++ .--+++ .... .... .. .+..+.+..+.+.+. .++.+++
T Consensus 145 ~-~~~~~~~~~~~~~~lgl~--------------~~~~-~~~~--~~------~~~~l~~~~~~l~p~-----~~~~~~~ 195 (404)
T 3h4t_A 145 A-DRLFGDAVNSHRASIGLP--------------PVEH-LYDY--GY------TDQPWLAADPVLSPL-----RPTDLGT 195 (404)
T ss_dssp H-HHHHHHHHHHHHHHTTCC--------------CCCC-HHHH--HH------CSSCEECSCTTTSCC-----CTTCCSC
T ss_pred H-HHHhHHHHHHHHHHcCCC--------------CCcc-hhhc--cc------cCCeEEeeCcceeCC-----CCCCCCe
Confidence 0 000000000 000000 0000 0110 01 122344566666553 3344689
Q ss_pred EEeccCCCCCCCCCCCCCCccchhccCCCCcEEEEeeCCCCCCCHHHHHHHHHHHHhcCCCEEEEEcCCcccccchhhhh
Q 012893 243 LNVGPSTLTSPPPVSDPHGCLPWLNEHENASVIYISFGSMITPPRAEVIALAEALEAIGFPFLWSFRGNAEEQLPKGFLE 322 (454)
Q Consensus 243 ~~vGp~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~~ 322 (454)
.++|++..+... +.++++.+|++. ++++|||++||+.. ..+.+..+++++++.+.++||.+++.....+
T Consensus 196 ~~~G~~~~~~~~--~~~~~l~~~l~~--~~~~Vlv~~Gs~~~-~~~~~~~~~~al~~~~~~vv~~~g~~~~~~~------ 264 (404)
T 3h4t_A 196 VQTGAWILPDQR--PLSAELEGFLRA--GSPPVYVGFGSGPA-PAEAARVAIEAVRAQGRRVVLSSGWAGLGRI------ 264 (404)
T ss_dssp CBCCCCCCCCCC--CCCHHHHHHHHT--SSCCEEECCTTSCC-CTTHHHHHHHHHHHTTCCEEEECTTTTCCCS------
T ss_pred EEeCccccCCCC--CCCHHHHHHHhc--CCCeEEEECCCCCC-cHHHHHHHHHHHHhCCCEEEEEeCCcccccc------
Confidence 999987765432 234456677763 45799999999986 6677889999999999999999987543222
Q ss_pred hhCCCceEeeccChHhhhcccCcceEEecCCchhHHHHHHcCCCeeccccccchhHHHHHHHHhhceeecCcCCCCCHHH
Q 012893 323 RTKSYGKVVPWAPQLKILEHSSVCVFVTHCGWNSTIEGITGGVPMVCRPVFADQALNQRIIETAWGIGVGVXGEKFTKDE 402 (454)
Q Consensus 323 ~~~~nv~v~~~vp~~~ll~~~~~~~~I~HgG~gsv~eal~~GvP~i~~P~~~DQ~~nA~~v~~~~G~G~~~~~~~~~~~~ 402 (454)
..++|+.+.+|+|+.++|++++ ++|||||+||+.||+++|+|+|++|+.+||+.||.++++. |+|+.++..+++++.
T Consensus 265 ~~~~~v~~~~~~~~~~ll~~~d--~~v~~gG~~t~~Eal~~GvP~v~~p~~~dQ~~na~~~~~~-G~g~~l~~~~~~~~~ 341 (404)
T 3h4t_A 265 DEGDDCLVVGEVNHQVLFGRVA--AVVHHGGAGTTTAVTRAGAPQVVVPQKADQPYYAGRVADL-GVGVAHDGPTPTVES 341 (404)
T ss_dssp SCCTTEEEESSCCHHHHGGGSS--EEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHH-TSEEECSSSSCCHHH
T ss_pred cCCCCEEEecCCCHHHHHhhCc--EEEECCcHHHHHHHHHcCCCEEEcCCcccHHHHHHHHHHC-CCEeccCcCCCCHHH
Confidence 1358999999999999998877 9999999999999999999999999999999999999999 999999888889999
Q ss_pred HHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHh
Q 012893 403 TVNALKQVLSSEEGKRMRENVGALKKLAFKAVESDGSSTKNFKALVEVVN 452 (454)
Q Consensus 403 l~~av~~vl~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 452 (454)
|.++|.++++ + +|+++++++++.+.+ .+...+.++++.++
T Consensus 342 l~~ai~~ll~-~---~~~~~~~~~~~~~~~------~~~~~~~~~i~~~~ 381 (404)
T 3h4t_A 342 LSAALATALT-P---GIRARAAAVAGTIRT------DGTTVAAKLLLEAI 381 (404)
T ss_dssp HHHHHHHHTS-H---HHHHHHHHHHTTCCC------CHHHHHHHHHHHHH
T ss_pred HHHHHHHHhC-H---HHHHHHHHHHHHHhh------hHHHHHHHHHHHHH
Confidence 9999999998 6 899999999887653 33455555565554
No 12
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=100.00 E-value=1.2e-39 Score=322.35 Aligned_cols=385 Identities=15% Similarity=0.170 Sum_probs=257.9
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHhhhcCCCcEEEEEEeCCCcCccccccccccCCCCeeEEeCCCCCCCCCCCC---
Q 012893 9 QRRHVAVLAFPFGTHAAPLLDLVRRLSEAALEEEVTFSFFSTAQSNGSLFMEKDELRDCKIVPYNVESGLPEGFRFT--- 85 (454)
Q Consensus 9 ~~~~il~~~~~~~GH~~p~l~la~~L~~~~~G~~h~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~--- 85 (454)
.|+||+|+++++.||++|+++||++| +++| |+|+|++++.+.+.+++. |+++.+++..++......
T Consensus 3 ~M~~il~~~~~~~Ghv~~~~~La~~L--~~~G--heV~v~~~~~~~~~~~~~-------G~~~~~~~~~~~~~~~~~~~~ 71 (402)
T 3ia7_A 3 RQRHILFANVQGHGHVYPSLGLVSEL--ARRG--HRITYVTTPLFADEVKAA-------GAEVVLYKSEFDTFHVPEVVK 71 (402)
T ss_dssp CCCEEEEECCSSHHHHHHHHHHHHHH--HHTT--CEEEEEECHHHHHHHHHT-------TCEEEECCCGGGTSSSSSSSC
T ss_pred CCCEEEEEeCCCCcccccHHHHHHHH--HhCC--CEEEEEcCHHHHHHHHHc-------CCEEEeccccccccccccccc
Confidence 35699999999999999999999999 9999 999999998877777767 899999975443221111
Q ss_pred -CCCcchHHH-HHHhchHHHHHHHHHHHHhcCCCccEEEEc-CchhhHHHHHHHcCCCeEEEeCchhhhhhhhhchhHHH
Q 012893 86 -GNPREPVEH-FLKATPGNFVRALEKAVAKTGLEISCLITD-AFLWFAAEMAEEMRVPWIAYWTAGPRSLLAHVDSDIIR 162 (454)
Q Consensus 86 -~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~pD~vi~d-~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~ 162 (454)
.+....+.. +...... ....+.++++. .+||+||+| ...+++..+|+.+|||+|.+.+..... ..+.......
T Consensus 72 ~~~~~~~~~~~~~~~~~~-~~~~l~~~l~~--~~pD~Vi~d~~~~~~~~~aA~~~giP~v~~~~~~~~~-~~~~~~~~~~ 147 (402)
T 3ia7_A 72 QEDAETQLHLVYVRENVA-ILRAAEEALGD--NPPDLVVYDVFPFIAGRLLAARWDRPAVRLTGGFAAN-EHYSLFKELW 147 (402)
T ss_dssp CTTHHHHHHHHHHHHHHH-HHHHHHHHHTT--CCCSEEEEESTTHHHHHHHHHHHTCCEEEEESSCCCB-TTBCHHHHHH
T ss_pred ccchHHHHHHHHHHHHHH-HHHHHHHHHhc--cCCCEEEECchHHHHHHHHHHhhCCCEEEEecccccC-cccccccccc
Confidence 111112221 2221111 11223333333 499999999 888889999999999999987543321 1010000000
Q ss_pred hhhCCCCCCCCccccCCC-CCcCCcCCCCCcccCCCCCCcHHHHHHHhccccCCccEEEecCcccCCHHHHHHHHhc-cC
Q 012893 163 EIIGVNGPENQTLESIPG-FSSIRAKDLPEGIISGPLDSPFPIMLDKMGKTLPKATVVAINSYEELDPIVVETLKSR-FR 240 (454)
Q Consensus 163 ~~~~~~~~~~~~~~~~p~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~ 240 (454)
+.... . .|. ...+ ...+...............+ .. ...+..+....+++++. ... ..
T Consensus 148 ~~~~~--~-------~~~~~~~~-~~~~~~~~~~~g~~~~~~~~----~~--~~~~~~l~~~~~~~~~~-----~~~~~~ 206 (402)
T 3ia7_A 148 KSNGQ--R-------HPADVEAV-HSVLVDLLGKYGVDTPVKEY----WD--EIEGLTIVFLPKSFQPF-----AETFDE 206 (402)
T ss_dssp HHHTC--C-------CGGGSHHH-HHHHHHHHHTTTCCSCHHHH----HT--CCCSCEEESSCGGGSTT-----GGGCCT
T ss_pred ccccc--c-------ChhhHHHH-HHHHHHHHHHcCCCCChhhh----hc--CCCCeEEEEcChHhCCc-----cccCCC
Confidence 00000 0 000 0000 00000000000000000111 00 01245566666666543 344 35
Q ss_pred CeEEeccCCCCCCCCCCCCCCccchhccCCCCcEEEEeeCCCCCCCHHHHHHHHHHHHhcCCCEEEEEcCCcccccchhh
Q 012893 241 KFLNVGPSTLTSPPPVSDPHGCLPWLNEHENASVIYISFGSMITPPRAEVIALAEALEAIGFPFLWSFRGNAEEQLPKGF 320 (454)
Q Consensus 241 ~~~~vGp~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~ 320 (454)
++.++||....... ...|....+++++||+++||........+..+++++++.+.++++.+|+.... +.+
T Consensus 207 ~~~~vGp~~~~~~~-------~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~---~~~ 276 (402)
T 3ia7_A 207 RFAFVGPTLTGRDG-------QPGWQPPRPDAPVLLVSLGNQFNEHPEFFRACAQAFADTPWHVVMAIGGFLDP---AVL 276 (402)
T ss_dssp TEEECCCCCCC-----------CCCCCSSTTCCEEEEECCSCSSCCHHHHHHHHHHHTTSSCEEEEECCTTSCG---GGG
T ss_pred CeEEeCCCCCCccc-------CCCCcccCCCCCEEEEECCCCCcchHHHHHHHHHHHhcCCcEEEEEeCCcCCh---hhh
Confidence 79999998754321 22466555677899999999987777788999999998888999988865221 111
Q ss_pred hhhhCCCceEeeccChHhhhcccCcceEEecCCchhHHHHHHcCCCeecccc-ccchhHHHHHHHHhhceeecCcCCCCC
Q 012893 321 LERTKSYGKVVPWAPQLKILEHSSVCVFVTHCGWNSTIEGITGGVPMVCRPV-FADQALNQRIIETAWGIGVGVXGEKFT 399 (454)
Q Consensus 321 ~~~~~~nv~v~~~vp~~~ll~~~~~~~~I~HgG~gsv~eal~~GvP~i~~P~-~~DQ~~nA~~v~~~~G~G~~~~~~~~~ 399 (454)
+..++|+.+.+|+|+..+|++++ ++|||||+||+.||+++|+|+|++|. ..||..||.++++. |+|..+..++++
T Consensus 277 -~~~~~~v~~~~~~~~~~ll~~ad--~~v~~~G~~t~~Ea~~~G~P~v~~p~~~~~q~~~a~~~~~~-g~g~~~~~~~~~ 352 (402)
T 3ia7_A 277 -GPLPPNVEAHQWIPFHSVLAHAR--ACLTHGTTGAVLEAFAAGVPLVLVPHFATEAAPSAERVIEL-GLGSVLRPDQLE 352 (402)
T ss_dssp -CSCCTTEEEESCCCHHHHHTTEE--EEEECCCHHHHHHHHHTTCCEEECGGGCGGGHHHHHHHHHT-TSEEECCGGGCS
T ss_pred -CCCCCcEEEecCCCHHHHHhhCC--EEEECCCHHHHHHHHHhCCCEEEeCCCcccHHHHHHHHHHc-CCEEEccCCCCC
Confidence 22458999999999999998877 99999999999999999999999999 99999999999999 999999888889
Q ss_pred HHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHH
Q 012893 400 KDETVNALKQVLSSEEGKRMRENVGALKKLAFKAVESDGSSTKNFKALVEVV 451 (454)
Q Consensus 400 ~~~l~~av~~vl~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 451 (454)
++.|.++|.++++|+ +++++++++++++.+ .+++ ..+.+.++.+
T Consensus 353 ~~~l~~~~~~ll~~~---~~~~~~~~~~~~~~~----~~~~-~~~~~~i~~~ 396 (402)
T 3ia7_A 353 PASIREAVERLAADS---AVRERVRRMQRDILS----SGGP-ARAADEVEAY 396 (402)
T ss_dssp HHHHHHHHHHHHHCH---HHHHHHHHHHHHHHT----SCHH-HHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCH---HHHHHHHHHHHHHhh----CChH-HHHHHHHHHH
Confidence 999999999999997 899999999988876 3433 4444444443
No 13
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=100.00 E-value=1.7e-39 Score=325.30 Aligned_cols=381 Identities=14% Similarity=0.138 Sum_probs=243.6
Q ss_pred cCCCCCcEEEEEcCCCccCHHHHHHHHHHHhhhcCCCcEEEEEEeCCCcCccccccccccCCCCeeEEeCCCCCCC-CCC
Q 012893 5 AGSTQRRHVAVLAFPFGTHAAPLLDLVRRLSEAALEEEVTFSFFSTAQSNGSLFMEKDELRDCKIVPYNVESGLPE-GFR 83 (454)
Q Consensus 5 ~~~~~~~~il~~~~~~~GH~~p~l~la~~L~~~~~G~~h~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~ 83 (454)
.....+|||+|+++++.||++|+++||++| +++| |+|+|++++.+.+.+++. |++|++++..... ...
T Consensus 15 ~~~~~~mrIl~~~~~~~GHv~p~l~la~~L--~~~G--heV~~~~~~~~~~~v~~~-------G~~~~~i~~~~~~~~~~ 83 (441)
T 2yjn_A 15 VPRGSHMRVVFSSMASKSHLFGLVPLAWAF--RAAG--HEVRVVASPALTEDITAA-------GLTAVPVGTDVDLVDFM 83 (441)
T ss_dssp ----CCCEEEEECCSCHHHHTTTHHHHHHH--HHTT--CEEEEEECGGGHHHHHTT-------TCCEEECSCCCCHHHHH
T ss_pred cccCCccEEEEEcCCCcchHhHHHHHHHHH--HHCC--CeEEEEeCchhHHHHHhC-------CCceeecCCccchHHHh
Confidence 345667999999999999999999999999 9999 999999998876667666 8999999854310 000
Q ss_pred -C----C------CC-----Cc----chH----HHHHHhch-----H-HHHHHHHHHHHhcCCCccEEEEcCchhhHHHH
Q 012893 84 -F----T------GN-----PR----EPV----EHFLKATP-----G-NFVRALEKAVAKTGLEISCLITDAFLWFAAEM 133 (454)
Q Consensus 84 -~----~------~~-----~~----~~~----~~~~~~~~-----~-~~~~~~~~~~~~~~~~pD~vi~d~~~~~~~~~ 133 (454)
. . .+ .. +.+ ..+..... . .+.+ +.++++.. +||+||+|...+++..+
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~~~--~pDlVv~d~~~~~~~~a 160 (441)
T 2yjn_A 84 THAGHDIIDYVRSLDFSERDPATLTWEHLLGMQTVLTPTFYALMSPDTLIEG-MVSFCRKW--RPDLVIWEPLTFAAPIA 160 (441)
T ss_dssp HHTTHHHHHHHTTCCCTTCCGGGGSHHHHHHHHHHHHHHTTTTSSCHHHHHH-HHHHHHHH--CCSEEEECTTCTHHHHH
T ss_pred hhhhcccccccccccccccCcchhhhhhhhhHHHHHHHHHHhhcchHHHHHH-HHHHHHhc--CCCEEEecCcchhHHHH
Confidence 0 0 00 10 011 01111111 1 2222 23334444 99999999877888899
Q ss_pred HHHcCCCeEEEeCchhhhhhhhhchhHHHhhhCCCCCCCCccccCCCCCcCCcCCCCCcccCCCCCCcHHHHHHHhcc-c
Q 012893 134 AEEMRVPWIAYWTAGPRSLLAHVDSDIIREIIGVNGPENQTLESIPGFSSIRAKDLPEGIISGPLDSPFPIMLDKMGK-T 212 (454)
Q Consensus 134 A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~ 212 (454)
|+.+|||+|.+...+........ .+..... ..|... .. ....+.+.++..++.. .
T Consensus 161 A~~lgiP~v~~~~~~~~~~~~~~---~~~~~~~----------~~~~~~------~~-----~~~~~~l~~~~~~~g~~~ 216 (441)
T 2yjn_A 161 AAVTGTPHARLLWGPDITTRARQ---NFLGLLP----------DQPEEH------RE-----DPLAEWLTWTLEKYGGPA 216 (441)
T ss_dssp HHHHTCCEEEECSSCCHHHHHHH---HHHHHGG----------GSCTTT------CC-----CHHHHHHHHHHHHTTCCC
T ss_pred HHHcCCCEEEEecCCCcchhhhh---hhhhhcc----------cccccc------cc-----chHHHHHHHHHHHcCCCC
Confidence 99999999998654322111000 0000000 011000 00 0000111222222211 1
Q ss_pred cC----CccEEEecCcccCCHHHHHHHHhccCCeEEeccCCCCCCCCCCCCCCccchhccCCCCcEEEEeeCCCCCC---
Q 012893 213 LP----KATVVAINSYEELDPIVVETLKSRFRKFLNVGPSTLTSPPPVSDPHGCLPWLNEHENASVIYISFGSMITP--- 285 (454)
Q Consensus 213 ~~----~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~--- 285 (454)
.. ..+..+....+.++++ .. ++. ..+++.... .+.++.+|++..+++++|||++||+...
T Consensus 217 ~~~~~~~~~~~l~~~~~~~~~~-----~~-~~~-~~~~~~~~~------~~~~~~~~l~~~~~~~~v~v~~Gs~~~~~~~ 283 (441)
T 2yjn_A 217 FDEEVVVGQWTIDPAPAAIRLD-----TG-LKT-VGMRYVDYN------GPSVVPEWLHDEPERRRVCLTLGISSRENSI 283 (441)
T ss_dssp CCGGGTSCSSEEECSCGGGSCC-----CC-CCE-EECCCCCCC------SSCCCCGGGSSCCSSCEEEEEC---------
T ss_pred CCccccCCCeEEEecCccccCC-----CC-CCC-CceeeeCCC------CCcccchHhhcCCCCCEEEEECCCCcccccC
Confidence 00 1334444444444321 11 111 122222111 1234567988767778999999999753
Q ss_pred CHHHHHHHHHHHHhcCCCEEEEEcCCcccccchhhhhhhCCCceEeeccChHhhhcccCcceEEecCCchhHHHHHHcCC
Q 012893 286 PRAEVIALAEALEAIGFPFLWSFRGNAEEQLPKGFLERTKSYGKVVPWAPQLKILEHSSVCVFVTHCGWNSTIEGITGGV 365 (454)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~~~~~~nv~v~~~vp~~~ll~~~~~~~~I~HgG~gsv~eal~~Gv 365 (454)
..+.+..+++++.+.+.++||.+++.....+. ..++|+.+.+|+|+..+|++++ +||||||+||++||+++|+
T Consensus 284 ~~~~~~~~~~al~~~~~~~v~~~g~~~~~~l~-----~~~~~v~~~~~~~~~~ll~~ad--~~V~~~G~~t~~Ea~~~G~ 356 (441)
T 2yjn_A 284 GQVSIEELLGAVGDVDAEIIATFDAQQLEGVA-----NIPDNVRTVGFVPMHALLPTCA--ATVHHGGPGSWHTAAIHGV 356 (441)
T ss_dssp -CCSTTTTHHHHHTSSSEEEECCCTTTTSSCS-----SCCSSEEECCSCCHHHHGGGCS--EEEECCCHHHHHHHHHTTC
T ss_pred hHHHHHHHHHHHHcCCCEEEEEECCcchhhhc-----cCCCCEEEecCCCHHHHHhhCC--EEEECCCHHHHHHHHHhCC
Confidence 23456678889988899999998865432221 2358999999999999997776 9999999999999999999
Q ss_pred CeeccccccchhHHHHHHHHhhceeecCcCCCCCHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHhhCCChHHHHH
Q 012893 366 PMVCRPVFADQALNQRIIETAWGIGVGVXGEKFTKDETVNALKQVLSSEEGKRMRENVGALKKLAFKAVESDGSSTKNFK 445 (454)
Q Consensus 366 P~i~~P~~~DQ~~nA~~v~~~~G~G~~~~~~~~~~~~l~~av~~vl~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~ 445 (454)
|+|++|...||+.||.++++. |+|+.++.++++++.|.++|.++++|+ +++++++++++++.+ .+ +...+.
T Consensus 357 P~i~~p~~~dQ~~na~~l~~~-g~g~~~~~~~~~~~~l~~~i~~ll~~~---~~~~~~~~~~~~~~~----~~-~~~~~~ 427 (441)
T 2yjn_A 357 PQVILPDGWDTGVRAQRTQEF-GAGIALPVPELTPDQLRESVKRVLDDP---AHRAGAARMRDDMLA----EP-SPAEVV 427 (441)
T ss_dssp CEEECCCSHHHHHHHHHHHHH-TSEEECCTTTCCHHHHHHHHHHHHHCH---HHHHHHHHHHHHHHT----SC-CHHHHH
T ss_pred CEEEeCCcccHHHHHHHHHHc-CCEEEcccccCCHHHHHHHHHHHhcCH---HHHHHHHHHHHHHHc----CC-CHHHHH
Confidence 999999999999999999999 999999988889999999999999997 999999999998876 23 345555
Q ss_pred HHHHHHh
Q 012893 446 ALVEVVN 452 (454)
Q Consensus 446 ~~~~~~~ 452 (454)
+.++.+.
T Consensus 428 ~~i~~~~ 434 (441)
T 2yjn_A 428 GICEELA 434 (441)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 5555544
No 14
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=100.00 E-value=2.5e-38 Score=311.23 Aligned_cols=358 Identities=12% Similarity=0.130 Sum_probs=248.2
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHhhhcCCCcEEEEEEeCCCcCccccccccccCCCCeeEEeCCCCCCCCC-C-----C
Q 012893 11 RHVAVLAFPFGTHAAPLLDLVRRLSEAALEEEVTFSFFSTAQSNGSLFMEKDELRDCKIVPYNVESGLPEGF-R-----F 84 (454)
Q Consensus 11 ~~il~~~~~~~GH~~p~l~la~~L~~~~~G~~h~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~-----~ 84 (454)
|||++++.++.||++|+++|+++| +++| |+|+|++++...+.+... |+++++++....... . .
T Consensus 1 MrIl~~~~~~~Gh~~p~~~la~~L--~~~G--h~V~~~~~~~~~~~~~~~-------g~~~~~~~~~~~~~~~~~~~~~~ 69 (384)
T 2p6p_A 1 MRILFVAAGSPATVFALAPLATAA--RNAG--HQVVMAANQDMGPVVTGV-------GLPAVATTDLPIRHFITTDREGR 69 (384)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHH--HHTT--CEEEEEECGGGHHHHHHT-------TCCEEESCSSCHHHHHHBCTTSC
T ss_pred CEEEEEeCCccchHhHHHHHHHHH--HHCC--CEEEEEeCHHHHHHHHhC-------CCEEEEeCCcchHHHHhhhcccC
Confidence 699999999999999999999999 8899 999999998765555555 899999874331000 0 0
Q ss_pred --CCCCc-chHHHH----HHhchHHHHHHHHHHHHhcCCCccEEEEcCchhhHHHHHHHcCCCeEEEeCchhhhhhhhhc
Q 012893 85 --TGNPR-EPVEHF----LKATPGNFVRALEKAVAKTGLEISCLITDAFLWFAAEMAEEMRVPWIAYWTAGPRSLLAHVD 157 (454)
Q Consensus 85 --~~~~~-~~~~~~----~~~~~~~~~~~~~~~~~~~~~~pD~vi~d~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~ 157 (454)
..+.. .....+ ...........+.++++.. +||+||+|...+++..+|+.+|||+|.+...+... .
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~--~pD~Vi~~~~~~~~~~~a~~~giP~v~~~~~~~~~-~---- 142 (384)
T 2p6p_A 70 PEAIPSDPVAQARFTGRWFARMAASSLPRMLDFSRAW--RPDLIVGGTMSYVAPLLALHLGVPHARQTWDAVDA-D---- 142 (384)
T ss_dssp BCCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--CCSEEEEETTCTHHHHHHHHHTCCEEEECCSSCCC-T----
T ss_pred ccccCcchHHHHHHHHHHHHhhHHHHHHHHHHHHhcc--CCcEEEECcchhhHHHHHHhcCCCEEEeccCCccc-c----
Confidence 00011 111111 1111111122233344444 89999999877888899999999999876422100 0
Q ss_pred hhHHHhhhCCCCCCCCccccCCCCCcCCcCCCCCcccCCCCCCcHHHHHHHhcc-ccCCccEEEecCcccCCHHHHHHHH
Q 012893 158 SDIIREIIGVNGPENQTLESIPGFSSIRAKDLPEGIISGPLDSPFPIMLDKMGK-TLPKATVVAINSYEELDPIVVETLK 236 (454)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~ 236 (454)
+.. .. ....+.++..+... ....++.+++++.+.++++ .
T Consensus 143 ----------------------~~~--------~~-----~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~-----~ 182 (384)
T 2p6p_A 143 ----------------------GIH--------PG-----ADAELRPELSELGLERLPAPDLFIDICPPSLRPA-----N 182 (384)
T ss_dssp ----------------------TTH--------HH-----HHHHTHHHHHHTTCSSCCCCSEEEECSCGGGSCT-----T
T ss_pred ----------------------hhh--------HH-----HHHHHHHHHHHcCCCCCCCCCeEEEECCHHHCCC-----C
Confidence 000 00 00001122222111 1112567888888777653 2
Q ss_pred hcc-CCeEEeccCCCCCCCCCCCCCCccchhccCCCCcEEEEeeCCCCCC-----CHHHHHHHHHHHHhcCCCEEEEEcC
Q 012893 237 SRF-RKFLNVGPSTLTSPPPVSDPHGCLPWLNEHENASVIYISFGSMITP-----PRAEVIALAEALEAIGFPFLWSFRG 310 (454)
Q Consensus 237 ~~~-~~~~~vGp~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~-----~~~~~~~~~~~~~~~~~~~i~~~~~ 310 (454)
+.. +++.++++ . .+.++.+|++..+++++|||++||.... ..+.+..+++++++.+.+++|++++
T Consensus 183 ~~~~~~~~~~~~---~------~~~~~~~~l~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~g~ 253 (384)
T 2p6p_A 183 AAPARMMRHVAT---S------RQCPLEPWMYTRDTRQRVLVTSGSRVAKESYDRNFDFLRGLAKDLVRWDVELIVAAPD 253 (384)
T ss_dssp SCCCEECCCCCC---C------CCCBCCHHHHCCCSSCEEEEECSSSSSCCSSCCCCTTHHHHHHHHHTTTCEEEEECCH
T ss_pred CCCCCceEecCC---C------CCCCCCchhhcCCCCCEEEEECCCCCccccccccHHHHHHHHHHHhcCCcEEEEEeCC
Confidence 222 13344421 1 1124567887756678999999999764 3467888999999889999998875
Q ss_pred CcccccchhhhhhhCCCceEeeccChHhhhcccCcceEEecCCchhHHHHHHcCCCeeccccccchhHHHHHHHHhhcee
Q 012893 311 NAEEQLPKGFLERTKSYGKVVPWAPQLKILEHSSVCVFVTHCGWNSTIEGITGGVPMVCRPVFADQALNQRIIETAWGIG 390 (454)
Q Consensus 311 ~~~~~l~~~~~~~~~~nv~v~~~vp~~~ll~~~~~~~~I~HgG~gsv~eal~~GvP~i~~P~~~DQ~~nA~~v~~~~G~G 390 (454)
... +.+ +..++|+.+ +|+|+..+|++++ +||||||+||++||+++|+|+|++|...||..||.++++. |+|
T Consensus 254 ~~~----~~l-~~~~~~v~~-~~~~~~~~l~~~d--~~v~~~G~~t~~Ea~~~G~P~v~~p~~~dq~~~a~~~~~~-g~g 324 (384)
T 2p6p_A 254 TVA----EAL-RAEVPQARV-GWTPLDVVAPTCD--LLVHHAGGVSTLTGLSAGVPQLLIPKGSVLEAPARRVADY-GAA 324 (384)
T ss_dssp HHH----HHH-HHHCTTSEE-ECCCHHHHGGGCS--EEEECSCTTHHHHHHHTTCCEEECCCSHHHHHHHHHHHHH-TSE
T ss_pred CCH----Hhh-CCCCCceEE-cCCCHHHHHhhCC--EEEeCCcHHHHHHHHHhCCCEEEccCcccchHHHHHHHHC-CCe
Confidence 321 222 234689999 9999999998876 9999999999999999999999999999999999999999 999
Q ss_pred ecCcCCCCCHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHh
Q 012893 391 VGVXGEKFTKDETVNALKQVLSSEEGKRMRENVGALKKLAFKAVESDGSSTKNFKALVEVVN 452 (454)
Q Consensus 391 ~~~~~~~~~~~~l~~av~~vl~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 452 (454)
+.++.++.+.++|.++|.++++|+ ++++++++++++++. ..+...+.++++.+.
T Consensus 325 ~~~~~~~~~~~~l~~~i~~ll~~~---~~~~~~~~~~~~~~~-----~~~~~~~~~~i~~~~ 378 (384)
T 2p6p_A 325 IALLPGEDSTEAIADSCQELQAKD---TYARRAQDLSREISG-----MPLPATVVTALEQLA 378 (384)
T ss_dssp EECCTTCCCHHHHHHHHHHHHHCH---HHHHHHHHHHHHHHT-----SCCHHHHHHHHHHHH
T ss_pred EecCcCCCCHHHHHHHHHHHHcCH---HHHHHHHHHHHHHHh-----CCCHHHHHHHHHHHh
Confidence 999877789999999999999997 899999999999987 234455555655553
No 15
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=100.00 E-value=1.6e-37 Score=310.04 Aligned_cols=364 Identities=18% Similarity=0.187 Sum_probs=244.8
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHhhhcCCCcEEEEEEeCCCcCccccccccccCCCCeeEEeCCCCCCCCCCC----
Q 012893 9 QRRHVAVLAFPFGTHAAPLLDLVRRLSEAALEEEVTFSFFSTAQSNGSLFMEKDELRDCKIVPYNVESGLPEGFRF---- 84 (454)
Q Consensus 9 ~~~~il~~~~~~~GH~~p~l~la~~L~~~~~G~~h~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~---- 84 (454)
.++||+|++.++.||++|++.|+++| +++| |+|++++++.+.+.+.+. |+++++++..++.....
T Consensus 6 ~m~kIl~~~~~~~Gh~~p~~~la~~L--~~~G--~~V~~~~~~~~~~~~~~~-------g~~~~~~~~~~~~~~~~~~~~ 74 (430)
T 2iyf_A 6 TPAHIAMFSIAAHGHVNPSLEVIREL--VARG--HRVTYAIPPVFADKVAAT-------GPRPVLYHSTLPGPDADPEAW 74 (430)
T ss_dssp --CEEEEECCSCHHHHGGGHHHHHHH--HHTT--CEEEEEECGGGHHHHHTT-------SCEEEECCCCSCCTTSCGGGG
T ss_pred ccceEEEEeCCCCccccchHHHHHHH--HHCC--CeEEEEeCHHHHHHHHhC-------CCEEEEcCCcCcccccccccc
Confidence 46799999999999999999999999 8899 999999998776666555 89999998654432211
Q ss_pred CCCCcchHHHHHHhchHHHHHHHHHHHHhcCCCccEEEEcCchhhHHHHHHHcCCCeEEEeCchhhhhhhhhch--hHHH
Q 012893 85 TGNPREPVEHFLKATPGNFVRALEKAVAKTGLEISCLITDAFLWFAAEMAEEMRVPWIAYWTAGPRSLLAHVDS--DIIR 162 (454)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pD~vi~d~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~--~~~~ 162 (454)
..+....+..+.... ......+.++++. .+||+||+|...+++..+|+.+|||+|.+.+.+.... .+... ....
T Consensus 75 ~~~~~~~~~~~~~~~-~~~~~~l~~~l~~--~~pD~Vi~d~~~~~~~~~A~~~giP~v~~~~~~~~~~-~~~~~~~~~~~ 150 (430)
T 2iyf_A 75 GSTLLDNVEPFLNDA-IQALPQLADAYAD--DIPDLVLHDITSYPARVLARRWGVPAVSLSPNLVAWK-GYEEEVAEPMW 150 (430)
T ss_dssp CSSHHHHHHHHHHHH-HHHHHHHHHHHTT--SCCSEEEEETTCHHHHHHHHHHTCCEEEEESSCCCCT-THHHHTHHHHH
T ss_pred chhhHHHHHHHHHHH-HHHHHHHHHHhhc--cCCCEEEECCccHHHHHHHHHcCCCEEEEeccccccc-ccccccccchh
Confidence 001111111111111 1122223334443 4899999998777888999999999999886543110 00000 0000
Q ss_pred hhhCCCCCCCCccccCCCCCcCCcCCCCCcccCCCCCCcHHHHHHHhc------cccCCccEEEecCcccCCHHHHHHHH
Q 012893 163 EIIGVNGPENQTLESIPGFSSIRAKDLPEGIISGPLDSPFPIMLDKMG------KTLPKATVVAINSYEELDPIVVETLK 236 (454)
Q Consensus 163 ~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~l~~~~~~~~~ 236 (454)
.. ....++...+ ...+.+++.+.. .....++.+++++.+.+++.. .
T Consensus 151 ~~----------~~~~~~~~~~--------------~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~----~ 202 (430)
T 2iyf_A 151 RE----------PRQTERGRAY--------------YARFEAWLKENGITEHPDTFASHPPRSLVLIPKALQPHA----D 202 (430)
T ss_dssp HH----------HHHSHHHHHH--------------HHHHHHHHHHTTCCSCHHHHHHCCSSEEECSCGGGSTTG----G
T ss_pred hh----------hccchHHHHH--------------HHHHHHHHHHhCCCCCHHHHhcCCCcEEEeCcHHhCCCc----c
Confidence 00 0000000000 000011111100 001135678888888877531 2
Q ss_pred hccCC-eEEeccCCCCCCCCCCCCCCccchhccCCCCcEEEEeeCCCCCCCHHHHHHHHHHHHhc-CCCEEEEEcCCccc
Q 012893 237 SRFRK-FLNVGPSTLTSPPPVSDPHGCLPWLNEHENASVIYISFGSMITPPRAEVIALAEALEAI-GFPFLWSFRGNAEE 314 (454)
Q Consensus 237 ~~~~~-~~~vGp~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~ 314 (454)
...++ ++++||....... ...|....+++++||+++||......+.+..+++++++. +.+++|.+|.....
T Consensus 203 ~~~~~~v~~vG~~~~~~~~-------~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~l~~~~~~~~~~~~G~~~~~ 275 (430)
T 2iyf_A 203 RVDEDVYTFVGACQGDRAE-------EGGWQRPAGAEKVVLVSLGSAFTKQPAFYRECVRAFGNLPGWHLVLQIGRKVTP 275 (430)
T ss_dssp GSCTTTEEECCCCC------------CCCCCCCTTCSEEEEEECTTTCC-CHHHHHHHHHHHTTCTTEEEEEECC---CG
T ss_pred cCCCccEEEeCCcCCCCCC-------CCCCccccCCCCeEEEEcCCCCCCcHHHHHHHHHHHhcCCCeEEEEEeCCCCCh
Confidence 23357 9999986543211 124655455678999999999854567888899999875 78888888764321
Q ss_pred ccchhhhhhhCCCceEeeccChHhhhcccCcceEEecCCchhHHHHHHcCCCeeccccccchhHHHHHHHHhhceeecCc
Q 012893 315 QLPKGFLERTKSYGKVVPWAPQLKILEHSSVCVFVTHCGWNSTIEGITGGVPMVCRPVFADQALNQRIIETAWGIGVGVX 394 (454)
Q Consensus 315 ~l~~~~~~~~~~nv~v~~~vp~~~ll~~~~~~~~I~HgG~gsv~eal~~GvP~i~~P~~~DQ~~nA~~v~~~~G~G~~~~ 394 (454)
+.+ +..++|+.+.+|+|+..+|.+++ +||||||+||+.||+++|+|+|++|..+||..|+.++++. |+|+.++
T Consensus 276 ---~~l-~~~~~~v~~~~~~~~~~~l~~ad--~~v~~~G~~t~~Ea~~~G~P~i~~p~~~~q~~~a~~~~~~-g~g~~~~ 348 (430)
T 2iyf_A 276 ---AEL-GELPDNVEVHDWVPQLAILRQAD--LFVTHAGAGGSQEGLATATPMIAVPQAVDQFGNADMLQGL-GVARKLA 348 (430)
T ss_dssp ---GGG-CSCCTTEEEESSCCHHHHHTTCS--EEEECCCHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHHT-TSEEECC
T ss_pred ---HHh-ccCCCCeEEEecCCHHHHhhccC--EEEECCCccHHHHHHHhCCCEEECCCccchHHHHHHHHHc-CCEEEcC
Confidence 111 22457999999999999999887 9999999999999999999999999999999999999999 9999998
Q ss_pred CCCCCHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHH
Q 012893 395 GEKFTKDETVNALKQVLSSEEGKRMRENVGALKKLAFK 432 (454)
Q Consensus 395 ~~~~~~~~l~~av~~vl~~~~~~~~~~~a~~l~~~~~~ 432 (454)
.++.+.+.|.++|.++++|+ ++++++.++++++.+
T Consensus 349 ~~~~~~~~l~~~i~~ll~~~---~~~~~~~~~~~~~~~ 383 (430)
T 2iyf_A 349 TEEATADLLRETALALVDDP---EVARRLRRIQAEMAQ 383 (430)
T ss_dssp CC-CCHHHHHHHHHHHHHCH---HHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHcCH---HHHHHHHHHHHHHHh
Confidence 87789999999999999987 899999998888776
No 16
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=100.00 E-value=2.1e-36 Score=298.95 Aligned_cols=357 Identities=14% Similarity=0.091 Sum_probs=240.8
Q ss_pred CCCCcEEEEEcCCCccCHHHHHHHHHHHhhhcCCCcEEEEEEeCCCcCccccccccccCCCCeeEEeCCCCCCCCC----
Q 012893 7 STQRRHVAVLAFPFGTHAAPLLDLVRRLSEAALEEEVTFSFFSTAQSNGSLFMEKDELRDCKIVPYNVESGLPEGF---- 82 (454)
Q Consensus 7 ~~~~~~il~~~~~~~GH~~p~l~la~~L~~~~~G~~h~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~---- 82 (454)
..++|||+|++.++.||++|+++|+++| +++| |+|+++++ .+.+.+... |+++++++.......
T Consensus 17 ~~~~MrIl~~~~~~~Ghv~~~~~La~~L--~~~G--heV~v~~~-~~~~~~~~~-------G~~~~~~~~~~~~~~~~~~ 84 (398)
T 3oti_A 17 EGRHMRVLFVSSPGIGHLFPLIQLAWGF--RTAG--HDVLIAVA-EHADRAAAA-------GLEVVDVAPDYSAVKVFEQ 84 (398)
T ss_dssp --CCCEEEEECCSSHHHHGGGHHHHHHH--HHTT--CEEEEEES-SCHHHHHTT-------TCEEEESSTTCCHHHHHHH
T ss_pred hhhcCEEEEEcCCCcchHhHHHHHHHHH--HHCC--CEEEEecc-chHHHHHhC-------CCeeEecCCccCHHHHhhh
Confidence 4567999999999999999999999999 9999 99999999 776677666 899999974321000
Q ss_pred --------------CCCCCCcchHHHHHHhchHHHHHHHHHHHHhcCCCccEEEEcCchhhHHHHHHHcCCCeEEEeCch
Q 012893 83 --------------RFTGNPREPVEHFLKATPGNFVRALEKAVAKTGLEISCLITDAFLWFAAEMAEEMRVPWIAYWTAG 148 (454)
Q Consensus 83 --------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pD~vi~d~~~~~~~~~A~~lgiP~v~~~~~~ 148 (454)
............+.... ......+.++++.. +||+||+|...+++..+|+.+|||+|......
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~l~~~--~pDlVv~d~~~~~~~~aA~~~giP~v~~~~~~ 161 (398)
T 3oti_A 85 VAKDNPRFAETVATRPAIDLEEWGVQIAAVN-RPLVDGTMALVDDY--RPDLVVYEQGATVGLLAADRAGVPAVQRNQSA 161 (398)
T ss_dssp HHHHCHHHHHTGGGSCCCSGGGGHHHHHHHH-GGGHHHHHHHHHHH--CCSEEEEETTCHHHHHHHHHHTCCEEEECCTT
T ss_pred cccCCccccccccCChhhhHHHHHHHHHHHH-HHHHHHHHHHHHHc--CCCEEEECchhhHHHHHHHHcCCCEEEEeccC
Confidence 00001111112222222 12222334445554 89999999888888899999999999875432
Q ss_pred hhhhhhhhchhHHHhhhCCCCCCCCccccCCCCCcCCcCCCCCcccCCCCCCcHHHHHHHhccccCCccEEEecCcccCC
Q 012893 149 PRSLLAHVDSDIIREIIGVNGPENQTLESIPGFSSIRAKDLPEGIISGPLDSPFPIMLDKMGKTLPKATVVAINSYEELD 228 (454)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 228 (454)
..... .... ....+..++.+........+..+....+.+.
T Consensus 162 ~~~~~-------~~~~---------------------------------~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (398)
T 3oti_A 162 WRTRG-------MHRS---------------------------------IASFLTDLMDKHQVSLPEPVATIESFPPSLL 201 (398)
T ss_dssp CCCTT-------HHHH---------------------------------HHTTCHHHHHHTTCCCCCCSEEECSSCGGGG
T ss_pred CCccc-------hhhH---------------------------------HHHHHHHHHHHcCCCCCCCCeEEEeCCHHHC
Confidence 11000 0000 0000122222222222223344433333332
Q ss_pred HHHHHHHHhcc-CCeEEeccCCCCCCCCCCCCCCccchhccCCCCcEEEEeeCCCCCC--CHHHHHHHHHHHHhcCCCEE
Q 012893 229 PIVVETLKSRF-RKFLNVGPSTLTSPPPVSDPHGCLPWLNEHENASVIYISFGSMITP--PRAEVIALAEALEAIGFPFL 305 (454)
Q Consensus 229 ~~~~~~~~~~~-~~~~~vGp~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~--~~~~~~~~~~~~~~~~~~~i 305 (454)
.+ .... ..+.++ |. .....+..|+...+++++|||++||.... ....+..+++++++.+.+++
T Consensus 202 ~~-----~~~~~~~~~~~-~~--------~~~~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~l~~~~~~~v 267 (398)
T 3oti_A 202 LE-----AEPEGWFMRWV-PY--------GGGAVLGDRLPPVPARPEVAITMGTIELQAFGIGAVEPIIAAAGEVDADFV 267 (398)
T ss_dssp TT-----SCCCSBCCCCC-CC--------CCCEECCSSCCCCCSSCEEEECCTTTHHHHHCGGGHHHHHHHHHTSSSEEE
T ss_pred CC-----CCCCCCCcccc-CC--------CCCcCCchhhhcCCCCCEEEEEcCCCccccCcHHHHHHHHHHHHcCCCEEE
Confidence 21 1000 011111 10 11122345776666788999999999542 44567888999998899999
Q ss_pred EEEcCCcccccchhhhhhhCCCceEeeccChHhhhcccCcceEEecCCchhHHHHHHcCCCeeccccccchhHHH--HHH
Q 012893 306 WSFRGNAEEQLPKGFLERTKSYGKVVPWAPQLKILEHSSVCVFVTHCGWNSTIEGITGGVPMVCRPVFADQALNQ--RII 383 (454)
Q Consensus 306 ~~~~~~~~~~l~~~~~~~~~~nv~v~~~vp~~~ll~~~~~~~~I~HgG~gsv~eal~~GvP~i~~P~~~DQ~~nA--~~v 383 (454)
|+.++.....+. ..++|+.+.+|+|+..+|++++ +||||||.||+.||+++|+|+|++|...||..|| .++
T Consensus 268 ~~~g~~~~~~l~-----~~~~~v~~~~~~~~~~ll~~ad--~~v~~~G~~t~~Eal~~G~P~v~~p~~~dq~~~a~~~~~ 340 (398)
T 3oti_A 268 LALGDLDISPLG-----TLPRNVRAVGWTPLHTLLRTCT--AVVHHGGGGTVMTAIDAGIPQLLAPDPRDQFQHTAREAV 340 (398)
T ss_dssp EECTTSCCGGGC-----SCCTTEEEESSCCHHHHHTTCS--EEEECCCHHHHHHHHHHTCCEEECCCTTCCSSCTTHHHH
T ss_pred EEECCcChhhhc-----cCCCcEEEEccCCHHHHHhhCC--EEEECCCHHHHHHHHHhCCCEEEcCCCchhHHHHHHHHH
Confidence 998876422221 2458999999999999998877 9999999999999999999999999999999999 999
Q ss_pred HHhhceeecCcCCCCCHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHh
Q 012893 384 ETAWGIGVGVXGEKFTKDETVNALKQVLSSEEGKRMRENVGALKKLAFKAVESDGSSTKNFKALVEVVN 452 (454)
Q Consensus 384 ~~~~G~G~~~~~~~~~~~~l~~av~~vl~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 452 (454)
++. |+|+.++.++.+++.|. ++++|+ +++++++++++++.+ ..+...+...++.+.
T Consensus 341 ~~~-g~g~~~~~~~~~~~~l~----~ll~~~---~~~~~~~~~~~~~~~-----~~~~~~~~~~l~~l~ 396 (398)
T 3oti_A 341 SRR-GIGLVSTSDKVDADLLR----RLIGDE---SLRTAAREVREEMVA-----LPTPAETVRRIVERI 396 (398)
T ss_dssp HHH-TSEEECCGGGCCHHHHH----HHHHCH---HHHHHHHHHHHHHHT-----SCCHHHHHHHHHHHH
T ss_pred HHC-CCEEeeCCCCCCHHHHH----HHHcCH---HHHHHHHHHHHHHHh-----CCCHHHHHHHHHHHh
Confidence 999 99999987777888776 888887 999999999999887 334455556666554
No 17
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=100.00 E-value=6.2e-37 Score=302.72 Aligned_cols=351 Identities=16% Similarity=0.153 Sum_probs=223.2
Q ss_pred cCCCCCcEEEEEcCCCccCHHHHHHHHHHHhhhcCCCcEEEEEEeCCCcCccccccccccCCCCeeEEeCCCCCCC----
Q 012893 5 AGSTQRRHVAVLAFPFGTHAAPLLDLVRRLSEAALEEEVTFSFFSTAQSNGSLFMEKDELRDCKIVPYNVESGLPE---- 80 (454)
Q Consensus 5 ~~~~~~~~il~~~~~~~GH~~p~l~la~~L~~~~~G~~h~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~---- 80 (454)
+....+|||+|++.++.||++|+++|+++| +++| |+|++++++.+.+.+.+. |+.+++++.....
T Consensus 10 ~~~~~~MrIl~~~~~~~gh~~~~~~La~~L--~~~G--heV~v~~~~~~~~~~~~~-------G~~~~~~~~~~~~~~~~ 78 (398)
T 4fzr_A 10 VPRGSHMRILVIAGCSEGFVMPLVPLSWAL--RAAG--HEVLVAASENMGPTVTGA-------GLPFAPTCPSLDMPEVL 78 (398)
T ss_dssp -----CCEEEEECCSSHHHHGGGHHHHHHH--HHTT--CEEEEEEEGGGHHHHHHT-------TCCEEEEESSCCHHHHH
T ss_pred CCCCCceEEEEEcCCCcchHHHHHHHHHHH--HHCC--CEEEEEcCHHHHHHHHhC-------CCeeEecCCccchHhhh
Confidence 345668999999999999999999999999 9999 999999998777777766 8888888631110
Q ss_pred ----CCCC---CCCCcchHHHH---HHhchHHHHHHHHHHHHhcCCCccEEEEcCchhhHHHHHHHcCCCeEEEeCchhh
Q 012893 81 ----GFRF---TGNPREPVEHF---LKATPGNFVRALEKAVAKTGLEISCLITDAFLWFAAEMAEEMRVPWIAYWTAGPR 150 (454)
Q Consensus 81 ----~~~~---~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~pD~vi~d~~~~~~~~~A~~lgiP~v~~~~~~~~ 150 (454)
.... .......+... +..........+.++++.. +||+|++|...+++..+|+.+|||+|.+......
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~pDlVv~d~~~~~~~~~a~~~giP~v~~~~~~~~ 156 (398)
T 4fzr_A 79 SWDREGNRTTMPREEKPLLEHIGRGYGRLVLRMRDEALALAERW--KPDLVLTETYSLTGPLVAATLGIPWIEQSIRLAS 156 (398)
T ss_dssp SBCTTSCBCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--CCSEEEEETTCTHHHHHHHHHTCCEEEECCSSCC
T ss_pred hhhccCcccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhC--CCCEEEECccccHHHHHHHhhCCCEEEeccCCCC
Confidence 0000 00001111111 1111112222334444544 9999999988888889999999999987654321
Q ss_pred hhhhhhchhHHHhhhCCCCCCCCccccCCCCCcCCcCCCCCcccCCCCCCcHHHHHHHhcc-ccCCccEEEecCcccCCH
Q 012893 151 SLLAHVDSDIIREIIGVNGPENQTLESIPGFSSIRAKDLPEGIISGPLDSPFPIMLDKMGK-TLPKATVVAINSYEELDP 229 (454)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~ 229 (454)
..... ...... +.+.+.+... .....+..+....+.+..
T Consensus 157 ~~~~~---~~~~~~-------------------------------------l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (398)
T 4fzr_A 157 PELIK---SAGVGE-------------------------------------LAPELAELGLTDFPDPLLSIDVCPPSMEA 196 (398)
T ss_dssp CHHHH---HHHHHH-------------------------------------THHHHHTTTCSSCCCCSEEEECSCGGGC-
T ss_pred chhhh---HHHHHH-------------------------------------HHHHHHHcCCCCCCCCCeEEEeCChhhCC
Confidence 10000 000000 0111111100 011223444444455543
Q ss_pred HHHHHHHhcc-CCeEEeccCCCCCCCCCCCCCCccchhccCCCCcEEEEeeCCCCCCC--------HHHHHHHHHHHHhc
Q 012893 230 IVVETLKSRF-RKFLNVGPSTLTSPPPVSDPHGCLPWLNEHENASVIYISFGSMITPP--------RAEVIALAEALEAI 300 (454)
Q Consensus 230 ~~~~~~~~~~-~~~~~vGp~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~--------~~~~~~~~~~~~~~ 300 (454)
. .... ..+.++++.. ...++..|+...+++++|||++||..... ...+..+++++.+.
T Consensus 197 ~-----~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~al~~~ 263 (398)
T 4fzr_A 197 Q-----PKPGTTKMRYVPYNG--------RNDQVPSWVFEERKQPRLCLTFGTRVPLPNTNTIPGGLSLLQALSQELPKL 263 (398)
T ss_dssp --------CCCEECCCCCCCC--------SSCCCCHHHHSCCSSCEEECC----------------CCSHHHHHHHGGGG
T ss_pred C-----CCCCCCCeeeeCCCC--------CCCCCchhhhcCCCCCEEEEEccCcccccccccccchHHHHHHHHHHHHhC
Confidence 2 1111 1122222110 12234568776667789999999996432 24577888999888
Q ss_pred CCCEEEEEcCCcccccchhhhhhhCCCceEeeccChHhhhcccCcceEEecCCchhHHHHHHcCCCeeccccccchhHHH
Q 012893 301 GFPFLWSFRGNAEEQLPKGFLERTKSYGKVVPWAPQLKILEHSSVCVFVTHCGWNSTIEGITGGVPMVCRPVFADQALNQ 380 (454)
Q Consensus 301 ~~~~i~~~~~~~~~~l~~~~~~~~~~nv~v~~~vp~~~ll~~~~~~~~I~HgG~gsv~eal~~GvP~i~~P~~~DQ~~nA 380 (454)
+.+++|+.++.....+ +..++|+.+.+|+|+..+|.+++ +||||||.||+.||+++|+|+|++|...||..||
T Consensus 264 ~~~~v~~~~~~~~~~l-----~~~~~~v~~~~~~~~~~ll~~ad--~~v~~gG~~t~~Ea~~~G~P~v~~p~~~~q~~~a 336 (398)
T 4fzr_A 264 GFEVVVAVSDKLAQTL-----QPLPEGVLAAGQFPLSAIMPACD--VVVHHGGHGTTLTCLSEGVPQVSVPVIAEVWDSA 336 (398)
T ss_dssp TCEEEECCCC-------------CCTTEEEESCCCHHHHGGGCS--EEEECCCHHHHHHHHHTTCCEEECCCSGGGHHHH
T ss_pred CCEEEEEeCCcchhhh-----ccCCCcEEEeCcCCHHHHHhhCC--EEEecCCHHHHHHHHHhCCCEEecCCchhHHHHH
Confidence 9999999887542222 13468999999999999999977 9999999999999999999999999999999999
Q ss_pred HHHHHhhceeecCcCCCCCHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHH
Q 012893 381 RIIETAWGIGVGVXGEKFTKDETVNALKQVLSSEEGKRMRENVGALKKLAFK 432 (454)
Q Consensus 381 ~~v~~~~G~G~~~~~~~~~~~~l~~av~~vl~~~~~~~~~~~a~~l~~~~~~ 432 (454)
.++++. |+|+.++.++++++.|.++|.++++|+ ++++++++.++++.+
T Consensus 337 ~~~~~~-g~g~~~~~~~~~~~~l~~ai~~ll~~~---~~~~~~~~~~~~~~~ 384 (398)
T 4fzr_A 337 RLLHAA-GAGVEVPWEQAGVESVLAACARIRDDS---SYVGNARRLAAEMAT 384 (398)
T ss_dssp HHHHHT-TSEEECC-------CHHHHHHHHHHCT---HHHHHHHHHHHHHTT
T ss_pred HHHHHc-CCEEecCcccCCHHHHHHHHHHHHhCH---HHHHHHHHHHHHHHc
Confidence 999999 999999988889999999999999998 999999999988876
No 18
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=100.00 E-value=3.8e-35 Score=289.14 Aligned_cols=359 Identities=14% Similarity=0.166 Sum_probs=238.6
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHhhhcCCCcEEEEEEeCCCcCccccccccccCCCCeeEEeC-CCCCC--CCC----
Q 012893 10 RRHVAVLAFPFGTHAAPLLDLVRRLSEAALEEEVTFSFFSTAQSNGSLFMEKDELRDCKIVPYNV-ESGLP--EGF---- 82 (454)
Q Consensus 10 ~~~il~~~~~~~GH~~p~l~la~~L~~~~~G~~h~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~i-~~~~~--~~~---- 82 (454)
+|||+|++.++.||++|++.|+++| +++| |+|++++++.+.+.+... |++++++ ..... ...
T Consensus 1 ~MrIl~~~~~~~gh~~~~~~la~~L--~~~G--heV~v~~~~~~~~~~~~~-------g~~~~~~~~~~~~~~~~~~~~~ 69 (391)
T 3tsa_A 1 HMRVLVVPLPYPTHLMAMVPLCWAL--QASG--HEVLIAAPPELQATAHGA-------GLTTAGIRGNDRTGDTGGTTQL 69 (391)
T ss_dssp CCEEEEECCSCHHHHHTTHHHHHHH--HHTT--CEEEEEECHHHHHHHHHB-------TCEEEEC--------------C
T ss_pred CcEEEEEcCCCcchhhhHHHHHHHH--HHCC--CEEEEecChhhHHHHHhC-------CCceeeecCCccchhhhhhhcc
Confidence 4899999999999999999999999 9999 999999987776667666 8898888 32111 000
Q ss_pred CCCC-----CCcchHHHHHHhchHHH-------HHHHHHHHHhcCCCccEEEEcCchhhHHHHHHHcCCCeEEEeCchhh
Q 012893 83 RFTG-----NPREPVEHFLKATPGNF-------VRALEKAVAKTGLEISCLITDAFLWFAAEMAEEMRVPWIAYWTAGPR 150 (454)
Q Consensus 83 ~~~~-----~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~pD~vi~d~~~~~~~~~A~~lgiP~v~~~~~~~~ 150 (454)
.... .....+...+......+ ...+.++++.. +||+|++|...+++..+|+.+|||+|.+.+....
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~--~PD~Vv~~~~~~~~~~aa~~~giP~v~~~~~~~~ 147 (391)
T 3tsa_A 70 RFPNPAFGQRDTEAGRQLWEQTASNVAQSSLDQLPEYLRLAEAW--RPSVLLVDVCALIGRVLGGLLDLPVVLHRWGVDP 147 (391)
T ss_dssp CSCCGGGGCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--CCSEEEEETTCHHHHHHHHHTTCCEEEECCSCCC
T ss_pred cccccccccccchhHHHHHHHHHHHHhhcchhhHHHHHHHHHhc--CCCEEEeCcchhHHHHHHHHhCCCEEEEecCCcc
Confidence 0000 00011111111111122 22334455554 9999999987788889999999999998654321
Q ss_pred hhhhhhchhHHHhhhCCCCCCCCccccCCCCCcCCcCCCCCcccCCCCCCcHHHHHHHhccc-cCCccEEEecCcccCCH
Q 012893 151 SLLAHVDSDIIREIIGVNGPENQTLESIPGFSSIRAKDLPEGIISGPLDSPFPIMLDKMGKT-LPKATVVAINSYEELDP 229 (454)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~ 229 (454)
...... ... ...+.+.+.+.... ....+..+....++++.
T Consensus 148 ~~~~~~--~~~-------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (391)
T 3tsa_A 148 TAGPFS--DRA-------------------------------------HELLDPVCRHHGLTGLPTPELILDPCPPSLQA 188 (391)
T ss_dssp TTTHHH--HHH-------------------------------------HHHHHHHHHHTTSSSSCCCSEEEECSCGGGSC
T ss_pred cccccc--chH-------------------------------------HHHHHHHHHHcCCCCCCCCceEEEecChhhcC
Confidence 100000 000 00011111111110 11124445444444432
Q ss_pred HHHHHHHhcc-CCeEEeccCCCCCCCCCCCCCCccchhccCCCCcEEEEeeCCCCC--CC-HHHHHHHHHHHHhc-CCCE
Q 012893 230 IVVETLKSRF-RKFLNVGPSTLTSPPPVSDPHGCLPWLNEHENASVIYISFGSMIT--PP-RAEVIALAEALEAI-GFPF 304 (454)
Q Consensus 230 ~~~~~~~~~~-~~~~~vGp~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~--~~-~~~~~~~~~~~~~~-~~~~ 304 (454)
. .... ..+.++ |+ .....+..|+...+++++|++++||... .. ...+..++++ ++. +.++
T Consensus 189 ~-----~~~~~~~~~~~-p~--------~~~~~~~~~~~~~~~~~~vlv~~G~~~~~~~~~~~~~~~~~~~-~~~p~~~~ 253 (391)
T 3tsa_A 189 S-----DAPQGAPVQYV-PY--------NGSGAFPAWGAARTSARRVCICMGRMVLNATGPAPLLRAVAAA-TELPGVEA 253 (391)
T ss_dssp T-----TSCCCEECCCC-CC--------CCCEECCGGGSSCCSSEEEEEECCHHHHHHHCSHHHHHHHHHH-HTSTTEEE
T ss_pred C-----CCCccCCeeee-cC--------CCCcCCCchhhcCCCCCEEEEEcCCCCCcccchHHHHHHHHHh-ccCCCeEE
Confidence 1 1111 112222 11 1112234677666677899999999843 23 6677888888 776 7888
Q ss_pred EEEEcCCcccccchhhhhhhCCCceEeeccChHhhhcccCcceEEecCCchhHHHHHHcCCCeeccccccchhHHHHHHH
Q 012893 305 LWSFRGNAEEQLPKGFLERTKSYGKVVPWAPQLKILEHSSVCVFVTHCGWNSTIEGITGGVPMVCRPVFADQALNQRIIE 384 (454)
Q Consensus 305 i~~~~~~~~~~l~~~~~~~~~~nv~v~~~vp~~~ll~~~~~~~~I~HgG~gsv~eal~~GvP~i~~P~~~DQ~~nA~~v~ 384 (454)
+|..++.....+. ..++|+.+.+|+|+..+|++++ +||||||.||++||+++|+|+|++|...||..|+.+++
T Consensus 254 v~~~~~~~~~~l~-----~~~~~v~~~~~~~~~~ll~~ad--~~v~~~G~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~~~ 326 (391)
T 3tsa_A 254 VIAVPPEHRALLT-----DLPDNARIAESVPLNLFLRTCE--LVICAGGSGTAFTATRLGIPQLVLPQYFDQFDYARNLA 326 (391)
T ss_dssp EEECCGGGGGGCT-----TCCTTEEECCSCCGGGTGGGCS--EEEECCCHHHHHHHHHTTCCEEECCCSTTHHHHHHHHH
T ss_pred EEEECCcchhhcc-----cCCCCEEEeccCCHHHHHhhCC--EEEeCCCHHHHHHHHHhCCCEEecCCcccHHHHHHHHH
Confidence 8888765422221 2458999999999999997776 99999999999999999999999999999999999999
Q ss_pred HhhceeecCcC--CCCCHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHH
Q 012893 385 TAWGIGVGVXG--EKFTKDETVNALKQVLSSEEGKRMRENVGALKKLAFKAVESDGSSTKNFKALVEVV 451 (454)
Q Consensus 385 ~~~G~G~~~~~--~~~~~~~l~~av~~vl~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 451 (454)
+. |+|+.++. ++.+++.|.++|.++++|+ +++++++++++++.+ ..+. ..+.+.++.+
T Consensus 327 ~~-g~g~~~~~~~~~~~~~~l~~ai~~ll~~~---~~~~~~~~~~~~~~~----~~~~-~~~~~~i~~~ 386 (391)
T 3tsa_A 327 AA-GAGICLPDEQAQSDHEQFTDSIATVLGDT---GFAAAAIKLSDEITA----MPHP-AALVRTLENT 386 (391)
T ss_dssp HT-TSEEECCSHHHHTCHHHHHHHHHHHHTCT---HHHHHHHHHHHHHHT----SCCH-HHHHHHHHHC
T ss_pred Hc-CCEEecCcccccCCHHHHHHHHHHHHcCH---HHHHHHHHHHHHHHc----CCCH-HHHHHHHHHH
Confidence 99 99999987 6679999999999999998 999999999988876 3444 4455555544
No 19
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=100.00 E-value=6.8e-32 Score=267.66 Aligned_cols=353 Identities=16% Similarity=0.142 Sum_probs=237.3
Q ss_pred cCCCCCcEEEEEcCCCccCHHHHHHHHHHHhhhcCCCcEEEEEEeCCCcCccccccccccCCCCeeEEeCCCCC------
Q 012893 5 AGSTQRRHVAVLAFPFGTHAAPLLDLVRRLSEAALEEEVTFSFFSTAQSNGSLFMEKDELRDCKIVPYNVESGL------ 78 (454)
Q Consensus 5 ~~~~~~~~il~~~~~~~GH~~p~l~la~~L~~~~~G~~h~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~------ 78 (454)
.....+|||+|++.++.||++|+++|+++| +++| |+|++++++.+.+.+.+. |++++.++..+
T Consensus 15 ~~~~~~MrIl~~~~~~~Gh~~~~~~la~~L--~~~G--heV~v~~~~~~~~~~~~~-------g~~~~~~~~~~~~~~~~ 83 (412)
T 3otg_A 15 HIEGRHMRVLFASLGTHGHTYPLLPLATAA--RAAG--HEVTFATGEGFAGTLRKL-------GFEPVATGMPVFDGFLA 83 (412)
T ss_dssp ---CCSCEEEEECCSSHHHHGGGHHHHHHH--HHTT--CEEEEEECGGGHHHHHHT-------TCEEEECCCCHHHHHHH
T ss_pred CcccceeEEEEEcCCCcccHHHHHHHHHHH--HHCC--CEEEEEccHHHHHHHHhc-------CCceeecCcccccchhh
Confidence 345668999999999999999999999999 9999 999999998765556555 89999987310
Q ss_pred ------CCCCCCCCC----CcchHHHHHHhchHHHHHHHHHHHHhcCCCccEEEEcCchhhHHHHHHHcCCCeEEEeCch
Q 012893 79 ------PEGFRFTGN----PREPVEHFLKATPGNFVRALEKAVAKTGLEISCLITDAFLWFAAEMAEEMRVPWIAYWTAG 148 (454)
Q Consensus 79 ------~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pD~vi~d~~~~~~~~~A~~lgiP~v~~~~~~ 148 (454)
......... .......+...........+.+++++. +||+|++|...+++..+|+.+|||+|.+....
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~--~pDvVv~~~~~~~~~~aa~~~giP~v~~~~~~ 161 (412)
T 3otg_A 84 ALRIRFDTDSPEGLTPEQLSELPQIVFGRVIPQRVFDELQPVIERL--RPDLVVQEISNYGAGLAALKAGIPTICHGVGR 161 (412)
T ss_dssp HHHHHHSCSCCTTCCHHHHTTSHHHHHHTHHHHHHHHHHHHHHHHH--CCSEEEEETTCHHHHHHHHHHTCCEEEECCSC
T ss_pred hhhhhhcccCCccCChhHhhHHHHHHHhccchHHHHHHHHHHHHhc--CCCEEEECchhhHHHHHHHHcCCCEEEecccc
Confidence 000000000 111111111110111223344455555 99999999777778889999999999875432
Q ss_pred hhhhhhhhchhHHHhhhCCCCCCCCccccCCCCCcCCcCCCCCcccCCCCCCcHHHHHHHhccc------cCCccEEEec
Q 012893 149 PRSLLAHVDSDIIREIIGVNGPENQTLESIPGFSSIRAKDLPEGIISGPLDSPFPIMLDKMGKT------LPKATVVAIN 222 (454)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~ 222 (454)
........ ... ..+.++..+.... ...++.++..
T Consensus 162 ~~~~~~~~---~~~-------------------------------------~~~~~~~~~~g~~~~~~~~~~~~d~~i~~ 201 (412)
T 3otg_A 162 DTPDDLTR---SIE-------------------------------------EEVRGLAQRLGLDLPPGRIDGFGNPFIDI 201 (412)
T ss_dssp CCCSHHHH---HHH-------------------------------------HHHHHHHHHTTCCCCSSCCGGGGCCEEEC
T ss_pred cCchhhhH---HHH-------------------------------------HHHHHHHHHcCCCCCcccccCCCCeEEee
Confidence 21100000 000 0001111110000 1224445555
Q ss_pred CcccCCHHHHHHHHhcc-CCeEEeccCCCCCCCCCCCCCCccch-hccCCCCcEEEEeeCCCCCCCHHHHHHHHHHHHhc
Q 012893 223 SYEELDPIVVETLKSRF-RKFLNVGPSTLTSPPPVSDPHGCLPW-LNEHENASVIYISFGSMITPPRAEVIALAEALEAI 300 (454)
Q Consensus 223 ~~~~l~~~~~~~~~~~~-~~~~~vGp~~~~~~~~~~~~~~~~~~-l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~~~~~~ 300 (454)
+.+.++.. .... .... |+...... .......| ....+++++|++++||........+..+++++.+.
T Consensus 202 ~~~~~~~~-----~~~~~~~~~---~~~~~~~~---~~~~~~~~~~~~~~~~~~vlv~~G~~~~~~~~~~~~~~~~l~~~ 270 (412)
T 3otg_A 202 FPPSLQEP-----EFRARPRRH---ELRPVPFA---EQGDLPAWLSSRDTARPLVYLTLGTSSGGTVEVLRAAIDGLAGL 270 (412)
T ss_dssp SCGGGSCH-----HHHTCTTEE---ECCCCCCC---CCCCCCGGGGGSCTTSCEEEEECTTTTCSCHHHHHHHHHHHHTS
T ss_pred CCHHhcCC-----cccCCCCcc---eeeccCCC---CCCCCCCccccccCCCCEEEEEcCCCCcCcHHHHHHHHHHHHcC
Confidence 54554432 1111 1111 11111111 11223456 33346678999999999755678888999999988
Q ss_pred CCCEEEEEcCCc-ccccchhhhhhhCCCceEeeccChHhhhcccCcceEEecCCchhHHHHHHcCCCeeccccccchhHH
Q 012893 301 GFPFLWSFRGNA-EEQLPKGFLERTKSYGKVVPWAPQLKILEHSSVCVFVTHCGWNSTIEGITGGVPMVCRPVFADQALN 379 (454)
Q Consensus 301 ~~~~i~~~~~~~-~~~l~~~~~~~~~~nv~v~~~vp~~~ll~~~~~~~~I~HgG~gsv~eal~~GvP~i~~P~~~DQ~~n 379 (454)
+.+++|.+++.. ...+ +..++|+.+.+|+|+..+|.+++ +||+|||+||+.||+++|+|+|++|...||..|
T Consensus 271 ~~~~~~~~g~~~~~~~l-----~~~~~~v~~~~~~~~~~~l~~ad--~~v~~~g~~t~~Ea~a~G~P~v~~p~~~~q~~~ 343 (412)
T 3otg_A 271 DADVLVASGPSLDVSGL-----GEVPANVRLESWVPQAALLPHVD--LVVHHGGSGTTLGALGAGVPQLSFPWAGDSFAN 343 (412)
T ss_dssp SSEEEEECCSSCCCTTC-----CCCCTTEEEESCCCHHHHGGGCS--EEEESCCHHHHHHHHHHTCCEEECCCSTTHHHH
T ss_pred CCEEEEEECCCCChhhh-----ccCCCcEEEeCCCCHHHHHhcCc--EEEECCchHHHHHHHHhCCCEEecCCchhHHHH
Confidence 999999988764 1112 12457999999999999999987 999999999999999999999999999999999
Q ss_pred HHHHHHhhceeecCcCCCCCHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHH
Q 012893 380 QRIIETAWGIGVGVXGEKFTKDETVNALKQVLSSEEGKRMRENVGALKKLAFK 432 (454)
Q Consensus 380 A~~v~~~~G~G~~~~~~~~~~~~l~~av~~vl~~~~~~~~~~~a~~l~~~~~~ 432 (454)
+.++++. |+|..++.++.+++.|.++|.++++|+ ++++++.+.++++.+
T Consensus 344 ~~~v~~~-g~g~~~~~~~~~~~~l~~ai~~ll~~~---~~~~~~~~~~~~~~~ 392 (412)
T 3otg_A 344 AQAVAQA-GAGDHLLPDNISPDSVSGAAKRLLAEE---SYRAGARAVAAEIAA 392 (412)
T ss_dssp HHHHHHH-TSEEECCGGGCCHHHHHHHHHHHHHCH---HHHHHHHHHHHHHHH
T ss_pred HHHHHHc-CCEEecCcccCCHHHHHHHHHHHHhCH---HHHHHHHHHHHHHhc
Confidence 9999999 999999887789999999999999997 899999888888776
No 20
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=100.00 E-value=5.3e-31 Score=256.57 Aligned_cols=339 Identities=15% Similarity=0.116 Sum_probs=214.2
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHhhhcCCCcEEEEEEeCCCcCc--cccccccccCCCCeeEEeCC-CCCCCCCCCCCC
Q 012893 11 RHVAVLAFPFGTHAAPLLDLVRRLSEAALEEEVTFSFFSTAQSNG--SLFMEKDELRDCKIVPYNVE-SGLPEGFRFTGN 87 (454)
Q Consensus 11 ~~il~~~~~~~GH~~p~l~la~~L~~~~~G~~h~V~~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~-~~~~~~~~~~~~ 87 (454)
.||+++..||.||++|+++||++| +++| |+|+|+++....+ .+++. |++++.++ .+++... ...
T Consensus 3 ~~i~i~~GGTgGHi~palala~~L--~~~g--~~V~~vg~~~g~e~~~v~~~-------g~~~~~i~~~~~~~~~--~~~ 69 (365)
T 3s2u_A 3 GNVLIMAGGTGGHVFPALACAREF--QARG--YAVHWLGTPRGIENDLVPKA-------GLPLHLIQVSGLRGKG--LKS 69 (365)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHH--HHTT--CEEEEEECSSSTHHHHTGGG-------TCCEEECC-------------
T ss_pred CcEEEEcCCCHHHHHHHHHHHHHH--HhCC--CEEEEEECCchHhhchhhhc-------CCcEEEEECCCcCCCC--HHH
Confidence 589999999999999999999999 9999 9999999865433 34555 89998887 3332211 001
Q ss_pred CcchHHHHHHhchHHHHHHHHHHHHhcCCCccEEEEc--CchhhHHHHHHHcCCCeEEEeCchhhhhhhhhchhHHHhhh
Q 012893 88 PREPVEHFLKATPGNFVRALEKAVAKTGLEISCLITD--AFLWFAAEMAEEMRVPWIAYWTAGPRSLLAHVDSDIIREII 165 (454)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pD~vi~d--~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~ 165 (454)
.......+... +.+ +..++++. +||+||++ +.+..+..+|+.+|||++..-.
T Consensus 70 ~~~~~~~~~~~----~~~-~~~~l~~~--~PDvVi~~g~~~s~p~~laA~~~~iP~vihe~------------------- 123 (365)
T 3s2u_A 70 LVKAPLELLKS----LFQ-ALRVIRQL--RPVCVLGLGGYVTGPGGLAARLNGVPLVIHEQ------------------- 123 (365)
T ss_dssp ---CHHHHHHH----HHH-HHHHHHHH--CCSEEEECSSSTHHHHHHHHHHTTCCEEEEEC-------------------
T ss_pred HHHHHHHHHHH----HHH-HHHHHHhc--CCCEEEEcCCcchHHHHHHHHHcCCCEEEEec-------------------
Confidence 11112222221 112 23344554 99999988 3455677889999999997421
Q ss_pred CCCCCCCCccccCCCCCcCCcCCCCCcccCCCCCCcHHHHHHHhccccCCccEEEecCcccCCHHHHHHHHhccCCeEEe
Q 012893 166 GVNGPENQTLESIPGFSSIRAKDLPEGIISGPLDSPFPIMLDKMGKTLPKATVVAINSYEELDPIVVETLKSRFRKFLNV 245 (454)
Q Consensus 166 ~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~v 245 (454)
+.+||+. .+++.++ ++.++. ++++..+ ..++..++
T Consensus 124 ----------n~~~G~~--------------------nr~l~~~------a~~v~~-~~~~~~~--------~~~k~~~~ 158 (365)
T 3s2u_A 124 ----------NAVAGTA--------------------NRSLAPI------ARRVCE-AFPDTFP--------ASDKRLTT 158 (365)
T ss_dssp ----------SSSCCHH--------------------HHHHGGG------CSEEEE-SSTTSSC--------C---CEEC
T ss_pred ----------chhhhhH--------------------HHhhccc------cceeee-ccccccc--------CcCcEEEE
Confidence 0133322 3333333 223332 3332211 12467788
Q ss_pred ccCCCCCCCCCCCCCCccchhccCCCCcEEEEeeCCCCCCCHHHHHHHHHHHHhc----CCCEEEEEcCCcccccchhhh
Q 012893 246 GPSTLTSPPPVSDPHGCLPWLNEHENASVIYISFGSMITPPRAEVIALAEALEAI----GFPFLWSFRGNAEEQLPKGFL 321 (454)
Q Consensus 246 Gp~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~~~~~~----~~~~i~~~~~~~~~~l~~~~~ 321 (454)
|+.......... .......+++++|+|..||.+.. ...+.+.+++... +..+++.+|....+.+.+.+
T Consensus 159 g~pvr~~~~~~~-----~~~~~~~~~~~~ilv~gGs~g~~--~~~~~~~~al~~l~~~~~~~vi~~~G~~~~~~~~~~~- 230 (365)
T 3s2u_A 159 GNPVRGELFLDA-----HARAPLTGRRVNLLVLGGSLGAE--PLNKLLPEALAQVPLEIRPAIRHQAGRQHAEITAERY- 230 (365)
T ss_dssp CCCCCGGGCCCT-----TSSCCCTTSCCEEEECCTTTTCS--HHHHHHHHHHHTSCTTTCCEEEEECCTTTHHHHHHHH-
T ss_pred CCCCchhhccch-----hhhcccCCCCcEEEEECCcCCcc--ccchhhHHHHHhcccccceEEEEecCcccccccccee-
Confidence 854433221111 11222235567999999998753 3334455555543 45677777766433332222
Q ss_pred hhhCCCceEeeccChH-hhhcccCcceEEecCCchhHHHHHHcCCCeeccccc----cchhHHHHHHHHhhceeecCcCC
Q 012893 322 ERTKSYGKVVPWAPQL-KILEHSSVCVFVTHCGWNSTIEGITGGVPMVCRPVF----ADQALNQRIIETAWGIGVGVXGE 396 (454)
Q Consensus 322 ~~~~~nv~v~~~vp~~-~ll~~~~~~~~I~HgG~gsv~eal~~GvP~i~~P~~----~DQ~~nA~~v~~~~G~G~~~~~~ 396 (454)
+..+.|+.+.+|+++. .++..+| ++|||+|.+|++|++++|+|+|++|.. .||..||+.+++. |+|+.++..
T Consensus 231 ~~~~~~~~v~~f~~dm~~~l~~aD--lvI~raG~~Tv~E~~a~G~P~Ilip~p~~~~~~Q~~NA~~l~~~-G~a~~l~~~ 307 (365)
T 3s2u_A 231 RTVAVEADVAPFISDMAAAYAWAD--LVICRAGALTVSELTAAGLPAFLVPLPHAIDDHQTRNAEFLVRS-GAGRLLPQK 307 (365)
T ss_dssp HHTTCCCEEESCCSCHHHHHHHCS--EEEECCCHHHHHHHHHHTCCEEECC-----CCHHHHHHHHHHTT-TSEEECCTT
T ss_pred cccccccccccchhhhhhhhccce--EEEecCCcchHHHHHHhCCCeEEeccCCCCCcHHHHHHHHHHHC-CCEEEeecC
Confidence 2345688999999975 7888887 999999999999999999999999974 5899999999999 999999988
Q ss_pred CCCHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHh
Q 012893 397 KFTKDETVNALKQVLSSEEGKRMRENVGALKKLAFKAVESDGSSTKNFKALVEVVN 452 (454)
Q Consensus 397 ~~~~~~l~~av~~vl~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 452 (454)
+++++.|.++|.++++|++ +.++|++..++. ...+ +.+.+.+.++++.
T Consensus 308 ~~~~~~L~~~i~~ll~d~~------~~~~m~~~a~~~-~~~~-aa~~ia~~i~~la 355 (365)
T 3s2u_A 308 STGAAELAAQLSEVLMHPE------TLRSMADQARSL-AKPE-ATRTVVDACLEVA 355 (365)
T ss_dssp TCCHHHHHHHHHHHHHCTH------HHHHHHHHHHHT-CCTT-HHHHHHHHHHHHC
T ss_pred CCCHHHHHHHHHHHHCCHH------HHHHHHHHHHhc-CCcc-HHHHHHHHHHHHH
Confidence 8999999999999999983 222333333332 1223 4455555555554
No 21
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}
Probab=99.95 E-value=2.2e-27 Score=205.69 Aligned_cols=162 Identities=30% Similarity=0.489 Sum_probs=139.3
Q ss_pred CCCccchhccCCCCcEEEEeeCCCCC-CCHHHHHHHHHHHHhcCCCEEEEEcCCcccccchhhhhhhCCCceEeeccChH
Q 012893 259 PHGCLPWLNEHENASVIYISFGSMIT-PPRAEVIALAEALEAIGFPFLWSFRGNAEEQLPKGFLERTKSYGKVVPWAPQL 337 (454)
Q Consensus 259 ~~~~~~~l~~~~~~~~v~vs~Gs~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~~~~~~nv~v~~~vp~~ 337 (454)
++++.+|++..+++++|||++||... .....+..+++++++.+.+++|++++..... .++|+.+.+|+|+.
T Consensus 8 ~~~~~~~l~~~~~~~~vlv~~Gs~~~~~~~~~~~~~~~al~~~~~~~~~~~g~~~~~~--------~~~~v~~~~~~~~~ 79 (170)
T 2o6l_A 8 PKEMEDFVQSSGENGVVVFSLGSMVSNMTEERANVIASALAQIPQKVLWRFDGNKPDT--------LGLNTRLYKWIPQN 79 (170)
T ss_dssp CHHHHHHHHTTTTTCEEEEECCSCCTTCCHHHHHHHHHHHTTSSSEEEEECCSSCCTT--------CCTTEEEESSCCHH
T ss_pred CHHHHHHHHcCCCCCEEEEECCCCcccCCHHHHHHHHHHHHhCCCeEEEEECCcCccc--------CCCcEEEecCCCHH
Confidence 45678899877777899999999963 4677888999999888899999988653222 34799999999999
Q ss_pred hhhcccCcceEEecCCchhHHHHHHcCCCeeccccccchhHHHHHHHHhhceeecCcCCCCCHHHHHHHHHHHhcCchHH
Q 012893 338 KILEHSSVCVFVTHCGWNSTIEGITGGVPMVCRPVFADQALNQRIIETAWGIGVGVXGEKFTKDETVNALKQVLSSEEGK 417 (454)
Q Consensus 338 ~ll~~~~~~~~I~HgG~gsv~eal~~GvP~i~~P~~~DQ~~nA~~v~~~~G~G~~~~~~~~~~~~l~~av~~vl~~~~~~ 417 (454)
.++.++.+++||||||+||++||+++|+|+|++|...||..||.++++. |+|+.++..+++.++|.++|.++++|+
T Consensus 80 ~~l~~~~ad~~I~~~G~~t~~Ea~~~G~P~i~~p~~~~Q~~na~~l~~~-g~g~~~~~~~~~~~~l~~~i~~ll~~~--- 155 (170)
T 2o6l_A 80 DLLGHPKTRAFITHGGANGIYEAIYHGIPMVGIPLFADQPDNIAHMKAR-GAAVRVDFNTMSSTDLLNALKRVINDP--- 155 (170)
T ss_dssp HHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHTT-TSEEECCTTTCCHHHHHHHHHHHHHCH---
T ss_pred HHhcCCCcCEEEEcCCccHHHHHHHcCCCEEeccchhhHHHHHHHHHHc-CCeEEeccccCCHHHHHHHHHHHHcCH---
Confidence 9997777779999999999999999999999999999999999999999 999999888889999999999999987
Q ss_pred HHHHHHHHHHHHHHH
Q 012893 418 RMRENVGALKKLAFK 432 (454)
Q Consensus 418 ~~~~~a~~l~~~~~~ 432 (454)
+|+++++++++.+++
T Consensus 156 ~~~~~a~~~~~~~~~ 170 (170)
T 2o6l_A 156 SYKENVMKLSRIQHD 170 (170)
T ss_dssp HHHHHHHHHC-----
T ss_pred HHHHHHHHHHHHhhC
Confidence 899999999988763
No 22
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=99.87 E-value=3.2e-20 Score=180.36 Aligned_cols=306 Identities=17% Similarity=0.104 Sum_probs=190.2
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHhhhcCCCcEEEEEEeCCCcCc--cccccccccCCCCeeEEeCCC-CCCCCCCCCCC
Q 012893 11 RHVAVLAFPFGTHAAPLLDLVRRLSEAALEEEVTFSFFSTAQSNG--SLFMEKDELRDCKIVPYNVES-GLPEGFRFTGN 87 (454)
Q Consensus 11 ~~il~~~~~~~GH~~p~l~la~~L~~~~~G~~h~V~~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~~-~~~~~~~~~~~ 87 (454)
|||++++.+..||..+++.|+++| .++| |+|++++...... .+... |+++..++. .+... .
T Consensus 7 mkIl~~~~~~gG~~~~~~~la~~L--~~~G--~~V~v~~~~~~~~~~~~~~~-------g~~~~~~~~~~~~~~-----~ 70 (364)
T 1f0k_A 7 KRLMVMAGGTGGHVFPGLAVAHHL--MAQG--WQVRWLGTADRMEADLVPKH-------GIEIDFIRISGLRGK-----G 70 (364)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHH--HTTT--CEEEEEECTTSTHHHHGGGG-------TCEEEECCCCCCTTC-----C
T ss_pred cEEEEEeCCCccchhHHHHHHHHH--HHcC--CEEEEEecCCcchhhhcccc-------CCceEEecCCccCcC-----c
Confidence 899999988889999999999999 8999 9999999865322 23333 788887752 12110 0
Q ss_pred CcchHHHHHHhchHHHHHHHHHHHHhcCCCccEEEEcCc--hhhHHHHHHHcCCCeEEEeCchhhhhhhhhchhHHHhhh
Q 012893 88 PREPVEHFLKATPGNFVRALEKAVAKTGLEISCLITDAF--LWFAAEMAEEMRVPWIAYWTAGPRSLLAHVDSDIIREII 165 (454)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pD~vi~d~~--~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~ 165 (454)
....+...... ...+.. +.++++.. +||+|+++.. ...+..+|+.+|+|+|......
T Consensus 71 ~~~~~~~~~~~-~~~~~~-l~~~l~~~--~pDvv~~~~~~~~~~~~~~~~~~~~p~v~~~~~~----------------- 129 (364)
T 1f0k_A 71 IKALIAAPLRI-FNAWRQ-ARAIMKAY--KPDVVLGMGGYVSGPGGLAAWSLGIPVVLHEQNG----------------- 129 (364)
T ss_dssp HHHHHTCHHHH-HHHHHH-HHHHHHHH--CCSEEEECSSTTHHHHHHHHHHTTCCEEEEECSS-----------------
T ss_pred cHHHHHHHHHH-HHHHHH-HHHHHHhc--CCCEEEEeCCcCchHHHHHHHHcCCCEEEEecCC-----------------
Confidence 00010000000 011122 33344444 9999999853 3456678899999998643210
Q ss_pred CCCCCCCCccccCCCCCcCCcCCCCCcccCCCCCCcHHHHHHHhccccCCccEEEecCcccCCHHHHHHHHhccCCeEEe
Q 012893 166 GVNGPENQTLESIPGFSSIRAKDLPEGIISGPLDSPFPIMLDKMGKTLPKATVVAINSYEELDPIVVETLKSRFRKFLNV 245 (454)
Q Consensus 166 ~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~v 245 (454)
.++ ...+++ ...++.+++.+.. . ++++.++
T Consensus 130 ------------~~~--------------------~~~~~~------~~~~d~v~~~~~~-~-----------~~~~~~i 159 (364)
T 1f0k_A 130 ------------IAG--------------------LTNKWL------AKIATKVMQAFPG-A-----------FPNAEVV 159 (364)
T ss_dssp ------------SCC--------------------HHHHHH------TTTCSEEEESSTT-S-----------SSSCEEC
T ss_pred ------------CCc--------------------HHHHHH------HHhCCEEEecChh-h-----------cCCceEe
Confidence 000 001111 1123444443211 1 2345566
Q ss_pred ccCCCCCCCCCCCCCCccchhccCCCCcEEEEeeCCCCCCCHHHHHHHHHHHHhc--CCCEEEEEcCCcccccchhhhhh
Q 012893 246 GPSTLTSPPPVSDPHGCLPWLNEHENASVIYISFGSMITPPRAEVIALAEALEAI--GFPFLWSFRGNAEEQLPKGFLER 323 (454)
Q Consensus 246 Gp~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~~~~~~--~~~~i~~~~~~~~~~l~~~~~~~ 323 (454)
|.-....... + . .....+...+++++|++..|+.. .......++++++.. +.++++.+|......+.+.. +.
T Consensus 160 ~n~v~~~~~~-~-~-~~~~~~~~~~~~~~il~~~g~~~--~~k~~~~li~a~~~l~~~~~~l~i~G~~~~~~l~~~~-~~ 233 (364)
T 1f0k_A 160 GNPVRTDVLA-L-P-LPQQRLAGREGPVRVLVVGGSQG--ARILNQTMPQVAAKLGDSVTIWHQSGKGSQQSVEQAY-AE 233 (364)
T ss_dssp CCCCCHHHHT-S-C-CHHHHHTTCCSSEEEEEECTTTC--CHHHHHHHHHHHHHHGGGEEEEEECCTTCHHHHHHHH-HH
T ss_pred CCccchhhcc-c-c-hhhhhcccCCCCcEEEEEcCchH--hHHHHHHHHHHHHHhcCCcEEEEEcCCchHHHHHHHH-hh
Confidence 6322211100 0 0 01112222234567887788875 344445555666543 45666667765422222111 12
Q ss_pred hC-CCceEeeccC-hHhhhcccCcceEEecCCchhHHHHHHcCCCeeccccc---cchhHHHHHHHHhhceeecCcCCCC
Q 012893 324 TK-SYGKVVPWAP-QLKILEHSSVCVFVTHCGWNSTIEGITGGVPMVCRPVF---ADQALNQRIIETAWGIGVGVXGEKF 398 (454)
Q Consensus 324 ~~-~nv~v~~~vp-~~~ll~~~~~~~~I~HgG~gsv~eal~~GvP~i~~P~~---~DQ~~nA~~v~~~~G~G~~~~~~~~ 398 (454)
.. +||.+.+|++ ...++..++ ++|+++|.+++.||+++|+|+|+.|.. .||..|+..+.+. |.|..++.++.
T Consensus 234 ~~~~~v~~~g~~~~~~~~~~~ad--~~v~~sg~~~~~EAma~G~Pvi~~~~~g~~~~q~~~~~~~~~~-g~g~~~~~~d~ 310 (364)
T 1f0k_A 234 AGQPQHKVTEFIDDMAAAYAWAD--VVVCRSGALTVSEIAAAGLPALFVPFQHKDRQQYWNALPLEKA-GAAKIIEQPQL 310 (364)
T ss_dssp TTCTTSEEESCCSCHHHHHHHCS--EEEECCCHHHHHHHHHHTCCEEECCCCCTTCHHHHHHHHHHHT-TSEEECCGGGC
T ss_pred cCCCceEEecchhhHHHHHHhCC--EEEECCchHHHHHHHHhCCCEEEeeCCCCchhHHHHHHHHHhC-CcEEEeccccC
Confidence 22 5899999995 478888887 999999988999999999999999987 7999999999999 99999988767
Q ss_pred CHHHHHHHHHHHhcCc
Q 012893 399 TKDETVNALKQVLSSE 414 (454)
Q Consensus 399 ~~~~l~~av~~vl~~~ 414 (454)
+.+.+.++|.++ |+
T Consensus 311 ~~~~la~~i~~l--~~ 324 (364)
T 1f0k_A 311 SVDAVANTLAGW--SR 324 (364)
T ss_dssp CHHHHHHHHHTC--CH
T ss_pred CHHHHHHHHHhc--CH
Confidence 799999999998 65
No 23
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=99.70 E-value=1.8e-15 Score=140.10 Aligned_cols=115 Identities=10% Similarity=0.024 Sum_probs=88.7
Q ss_pred CcEEEEeeCCCCCCCHHHHHHHHHHHHhcCCCEEEEEcCCcccccchhhhhh--hCCCceEeeccChH-hhhcccCcceE
Q 012893 272 ASVIYISFGSMITPPRAEVIALAEALEAIGFPFLWSFRGNAEEQLPKGFLER--TKSYGKVVPWAPQL-KILEHSSVCVF 348 (454)
Q Consensus 272 ~~~v~vs~Gs~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~~~--~~~nv~v~~~vp~~-~ll~~~~~~~~ 348 (454)
.+.|+|++|+.... .....+++++.... ++.+++|.+.. ..+.+.+. ...|+.+.+|+++. .++..++ ++
T Consensus 157 ~~~ILv~~GG~d~~--~l~~~vl~~L~~~~-~i~vv~G~~~~--~~~~l~~~~~~~~~v~v~~~~~~m~~~m~~aD--lv 229 (282)
T 3hbm_A 157 KYDFFICMGGTDIK--NLSLQIASELPKTK-IISIATSSSNP--NLKKLQKFAKLHNNIRLFIDHENIAKLMNESN--KL 229 (282)
T ss_dssp CEEEEEECCSCCTT--CHHHHHHHHSCTTS-CEEEEECTTCT--THHHHHHHHHTCSSEEEEESCSCHHHHHHTEE--EE
T ss_pred CCeEEEEECCCchh--hHHHHHHHHhhcCC-CEEEEECCCch--HHHHHHHHHhhCCCEEEEeCHHHHHHHHHHCC--EE
Confidence 46899999987533 35556777776543 67777776542 22333221 12589999999876 6787666 99
Q ss_pred EecCCchhHHHHHHcCCCeeccccccchhHHHHHHHHhhceeecCcC
Q 012893 349 VTHCGWNSTIEGITGGVPMVCRPVFADQALNQRIIETAWGIGVGVXG 395 (454)
Q Consensus 349 I~HgG~gsv~eal~~GvP~i~~P~~~DQ~~nA~~v~~~~G~G~~~~~ 395 (454)
||+|| +|++|+++.|+|+|++|...+|..||..+++. |++..++.
T Consensus 230 I~~gG-~T~~E~~~~g~P~i~ip~~~~Q~~nA~~l~~~-G~~~~~~~ 274 (282)
T 3hbm_A 230 IISAS-SLVNEALLLKANFKAICYVKNQESTATWLAKK-GYEVEYKY 274 (282)
T ss_dssp EEESS-HHHHHHHHTTCCEEEECCSGGGHHHHHHHHHT-TCEEECGG
T ss_pred EECCc-HHHHHHHHcCCCEEEEeCCCCHHHHHHHHHHC-CCEEEcch
Confidence 99999 89999999999999999999999999999999 99998864
No 24
>2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A
Probab=99.67 E-value=1.2e-16 Score=141.86 Aligned_cols=136 Identities=13% Similarity=0.154 Sum_probs=98.6
Q ss_pred hccCCCCcEEEEeeCCCCCCCHHHHHHH-----HHHHHhcC-CCEEEEEcCCcccccchhhhhhh---------------
Q 012893 266 LNEHENASVIYISFGSMITPPRAEVIAL-----AEALEAIG-FPFLWSFRGNAEEQLPKGFLERT--------------- 324 (454)
Q Consensus 266 l~~~~~~~~v~vs~Gs~~~~~~~~~~~~-----~~~~~~~~-~~~i~~~~~~~~~~l~~~~~~~~--------------- 324 (454)
+...+++++|||+.||... -...+..+ ++.+.+.+ .++++++|....... +.+.+..
T Consensus 22 ~~~~~~~~~VlVtgGS~~~-~n~li~~vl~~~~l~~L~~~~~~~vv~q~G~~~~~~~-~~~~~~~~~~~~~~l~p~~~~~ 99 (224)
T 2jzc_A 22 LEGIIEEKALFVTCGATVP-FPKLVSCVLSDEFCQELIQYGFVRLIIQFGRNYSSEF-EHLVQERGGQRESQKIPIDQFG 99 (224)
T ss_dssp --CCCCSCCEEEECCSCCS-CHHHHHHHTSHHHHHHHHTTTCCCEEECCCSSSCCCC-CSHHHHHTCEECSCCCSSCTTC
T ss_pred cCCCCCCCEEEEEcCCchH-HHHHHHHHHHHHHHHHHhcCCCeEEEEEECCCchhhH-HHHHHhhhcccccccccccccc
Confidence 3344567899999999842 23433333 47887777 799999998653111 1110000
Q ss_pred -------------CCCceEeeccChH-hhhc-ccCcceEEecCCchhHHHHHHcCCCeeccccc----cchhHHHHHHHH
Q 012893 325 -------------KSYGKVVPWAPQL-KILE-HSSVCVFVTHCGWNSTIEGITGGVPMVCRPVF----ADQALNQRIIET 385 (454)
Q Consensus 325 -------------~~nv~v~~~vp~~-~ll~-~~~~~~~I~HgG~gsv~eal~~GvP~i~~P~~----~DQ~~nA~~v~~ 385 (454)
.-++.+.+|+++. .+|+ .++ ++|||||+||++|++++|+|+|++|.. .||..||+++++
T Consensus 100 ~~~~~~~~~~~~~~~~v~v~~f~~~m~~~l~~~Ad--lvIshaGagTv~Eal~~G~P~IvVP~~~~~~~HQ~~nA~~l~~ 177 (224)
T 2jzc_A 100 CGDTARQYVLMNGKLKVIGFDFSTKMQSIIRDYSD--LVISHAGTGSILDSLRLNKPLIVCVNDSLMDNHQQQIADKFVE 177 (224)
T ss_dssp TTCSCEEEESTTTSSEEEECCSSSSHHHHHHHHCS--CEEESSCHHHHHHHHHTTCCCCEECCSSCCCCHHHHHHHHHHH
T ss_pred ccccccccccccCCceEEEeeccchHHHHHHhcCC--EEEECCcHHHHHHHHHhCCCEEEEcCcccccchHHHHHHHHHH
Confidence 1244567888875 8898 887 999999999999999999999999984 479999999999
Q ss_pred hhceeecCcCCCCCHHHHHHHHHHHh
Q 012893 386 AWGIGVGVXGEKFTKDETVNALKQVL 411 (454)
Q Consensus 386 ~~G~G~~~~~~~~~~~~l~~av~~vl 411 (454)
. |+|+.+ +.+.|.++|.++.
T Consensus 178 ~-G~~~~~-----~~~~L~~~i~~l~ 197 (224)
T 2jzc_A 178 L-GYVWSC-----APTETGLIAGLRA 197 (224)
T ss_dssp H-SCCCEE-----CSCTTTHHHHHHH
T ss_pred C-CCEEEc-----CHHHHHHHHHHHH
Confidence 9 999765 5577777777763
No 25
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=99.44 E-value=3.3e-11 Score=119.59 Aligned_cols=369 Identities=14% Similarity=0.120 Sum_probs=188.0
Q ss_pred CCCCcEEEEEcC-----------CCccCHHHHHHHHHHHhhhcCCCcEEEEEEeCCCcCc--cccccccccCCCCeeEEe
Q 012893 7 STQRRHVAVLAF-----------PFGTHAAPLLDLVRRLSEAALEEEVTFSFFSTAQSNG--SLFMEKDELRDCKIVPYN 73 (454)
Q Consensus 7 ~~~~~~il~~~~-----------~~~GH~~p~l~la~~L~~~~~G~~h~V~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 73 (454)
..+||||++++. ...|+-..+..|+++| .++| |+|++++...... ..... . .+++++.
T Consensus 17 ~~~mmkIl~i~~~~~p~~~~~~~~~GG~~~~~~~la~~L--~~~G--~~V~v~~~~~~~~~~~~~~~---~--~~v~v~~ 87 (438)
T 3c48_A 17 RGSHMRVAMISMHTSPLQQPGTGDSGGMNVYILSTATEL--AKQG--IEVDIYTRATRPSQGEIVRV---A--ENLRVIN 87 (438)
T ss_dssp --CCCEEEEECTTSCTTCC-------CHHHHHHHHHHHH--HHTT--CEEEEEEECCCGGGCSEEEE---E--TTEEEEE
T ss_pred CcchheeeeEEeeccccccCCCCCCCCHHHHHHHHHHHH--HhcC--CEEEEEecCCCCCCcccccc---c--CCeEEEE
Confidence 456899999995 2468889999999999 8899 9999999754321 11111 1 3777777
Q ss_pred CCCCCCCCCCCCCCCcchHHHHHHhchHHHHHHHHHHHHhcCCCccEEEEcCch--hhHHHHHHHcCCCeEEEeCchhhh
Q 012893 74 VESGLPEGFRFTGNPREPVEHFLKATPGNFVRALEKAVAKTGLEISCLITDAFL--WFAAEMAEEMRVPWIAYWTAGPRS 151 (454)
Q Consensus 74 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pD~vi~d~~~--~~~~~~A~~lgiP~v~~~~~~~~~ 151 (454)
++....... ........+..+. ...++.+++.. .+||+|++.... ..+..+++.+|+|+|.........
T Consensus 88 ~~~~~~~~~-~~~~~~~~~~~~~-------~~~~~~~~~~~-~~~Div~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~ 158 (438)
T 3c48_A 88 IAAGPYEGL-SKEELPTQLAAFT-------GGMLSFTRREK-VTYDLIHSHYWLSGQVGWLLRDLWRIPLIHTAHTLAAV 158 (438)
T ss_dssp ECCSCSSSC-CGGGGGGGHHHHH-------HHHHHHHHHHT-CCCSEEEEEHHHHHHHHHHHHHHHTCCEEEECSSCHHH
T ss_pred ecCCCcccc-chhHHHHHHHHHH-------HHHHHHHHhcc-CCCCEEEeCCccHHHHHHHHHHHcCCCEEEEecCCccc
Confidence 752211110 0000111111111 11122212322 249999887432 244457788999998865432211
Q ss_pred hhhhhchhHHHhhhCCCCCCCCccccCCCCCcCCcCCCCCcccCCCCCCcHHHHHHHhccccCCccEEEecCcccCCHHH
Q 012893 152 LLAHVDSDIIREIIGVNGPENQTLESIPGFSSIRAKDLPEGIISGPLDSPFPIMLDKMGKTLPKATVVAINSYEELDPIV 231 (454)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 231 (454)
.. ..+. ..... .......+.+ ..+..++.+++.+....
T Consensus 159 ~~-------------------------~~~~---~~~~~--------~~~~~~~~~~--~~~~~~d~ii~~s~~~~---- 196 (438)
T 3c48_A 159 KN-------------------------SYRD---DSDTP--------ESEARRICEQ--QLVDNADVLAVNTQEEM---- 196 (438)
T ss_dssp HS-------------------------CC-------CCH--------HHHHHHHHHH--HHHHHCSEEEESSHHHH----
T ss_pred cc-------------------------cccc---ccCCc--------chHHHHHHHH--HHHhcCCEEEEcCHHHH----
Confidence 00 0000 00000 0000111111 12334677777663221
Q ss_pred HHHHHh---cc-CCeEEeccCCCCCCCCCCCCCC---ccchhccCCCCcEEEEeeCCCCCC-CHHHHHHHHHHHHhc---
Q 012893 232 VETLKS---RF-RKFLNVGPSTLTSPPPVSDPHG---CLPWLNEHENASVIYISFGSMITP-PRAEVIALAEALEAI--- 300 (454)
Q Consensus 232 ~~~~~~---~~-~~~~~vGp~~~~~~~~~~~~~~---~~~~l~~~~~~~~v~vs~Gs~~~~-~~~~~~~~~~~~~~~--- 300 (454)
+.... .. .++..++.-............. +..-++. ++...+++..|+.... ..+.+...+..+.+.
T Consensus 197 -~~~~~~~g~~~~k~~vi~ngvd~~~~~~~~~~~~~~~r~~~~~-~~~~~~i~~~G~~~~~Kg~~~li~a~~~l~~~~p~ 274 (438)
T 3c48_A 197 -QDLMHHYDADPDRISVVSPGADVELYSPGNDRATERSRRELGI-PLHTKVVAFVGRLQPFKGPQVLIKAVAALFDRDPD 274 (438)
T ss_dssp -HHHHHHHCCCGGGEEECCCCCCTTTSCCC----CHHHHHHTTC-CSSSEEEEEESCBSGGGCHHHHHHHHHHHHHHCTT
T ss_pred -HHHHHHhCCChhheEEecCCccccccCCcccchhhhhHHhcCC-CCCCcEEEEEeeecccCCHHHHHHHHHHHHhhCCC
Confidence 12222 12 3566666433322111101111 1111211 1223566777887532 233333333444332
Q ss_pred -CCCEEEEEc----CCcccccchhhhhh--hCCCceEeeccCh---HhhhcccCcceEEecC----CchhHHHHHHcCCC
Q 012893 301 -GFPFLWSFR----GNAEEQLPKGFLER--TKSYGKVVPWAPQ---LKILEHSSVCVFVTHC----GWNSTIEGITGGVP 366 (454)
Q Consensus 301 -~~~~i~~~~----~~~~~~l~~~~~~~--~~~nv~v~~~vp~---~~ll~~~~~~~~I~Hg----G~gsv~eal~~GvP 366 (454)
+.+++++.. +.....+. ...+. ..++|.+.+++|+ ..++..++ ++|... .-.++.||+++|+|
T Consensus 275 ~~~~l~i~G~~~~~g~~~~~l~-~~~~~~~l~~~v~~~g~~~~~~~~~~~~~ad--v~v~ps~~e~~~~~~~Eama~G~P 351 (438)
T 3c48_A 275 RNLRVIICGGPSGPNATPDTYR-HMAEELGVEKRIRFLDPRPPSELVAVYRAAD--IVAVPSFNESFGLVAMEAQASGTP 351 (438)
T ss_dssp CSEEEEEECCBC------CHHH-HHHHHTTCTTTEEEECCCCHHHHHHHHHHCS--EEEECCSCCSSCHHHHHHHHTTCC
T ss_pred cceEEEEEeCCCCCCcHHHHHH-HHHHHcCCCCcEEEcCCCChHHHHHHHHhCC--EEEECccccCCchHHHHHHHcCCC
Confidence 344444433 11111111 11111 2468999999986 47787877 777653 24589999999999
Q ss_pred eeccccccchhHHHHHHHHhhceeecCcCCCCCHHHHHHHHHHHhcCchH-HHHHHHHHHHHHHHHHHHhhCCChHHHHH
Q 012893 367 MVCRPVFADQALNQRIIETAWGIGVGVXGEKFTKDETVNALKQVLSSEEG-KRMRENVGALKKLAFKAVESDGSSTKNFK 445 (454)
Q Consensus 367 ~i~~P~~~DQ~~nA~~v~~~~G~G~~~~~~~~~~~~l~~av~~vl~~~~~-~~~~~~a~~l~~~~~~~~~~~~~~~~~~~ 445 (454)
+|+.+. ......++.. +.|..++.. +.++++++|.++++|++. +.+.+++++..+.+.- ....+.+.
T Consensus 352 vI~~~~----~~~~e~i~~~-~~g~~~~~~--d~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~s~-----~~~~~~~~ 419 (438)
T 3c48_A 352 VIAARV----GGLPIAVAEG-ETGLLVDGH--SPHAWADALATLLDDDETRIRMGEDAVEHARTFSW-----AATAAQLS 419 (438)
T ss_dssp EEEESC----TTHHHHSCBT-TTEEEESSC--CHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH-----HHHHHHHH
T ss_pred EEecCC----CChhHHhhCC-CcEEECCCC--CHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHhCCH-----HHHHHHHH
Confidence 998654 3455566666 678877754 799999999999998742 5566666666655322 23334555
Q ss_pred HHHHHHh
Q 012893 446 ALVEVVN 452 (454)
Q Consensus 446 ~~~~~~~ 452 (454)
++.+.++
T Consensus 420 ~~~~~~~ 426 (438)
T 3c48_A 420 SLYNDAI 426 (438)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 5555554
No 26
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=99.43 E-value=2.3e-12 Score=125.33 Aligned_cols=129 Identities=17% Similarity=0.153 Sum_probs=84.0
Q ss_pred CCcEEEEeeCCCCCCCHHHHHHHHHHHHh-----cCCCEEEEEcCCcccccchhhhhhh--CCCceEeeccCh---Hhhh
Q 012893 271 NASVIYISFGSMITPPRAEVIALAEALEA-----IGFPFLWSFRGNAEEQLPKGFLERT--KSYGKVVPWAPQ---LKIL 340 (454)
Q Consensus 271 ~~~~v~vs~Gs~~~~~~~~~~~~~~~~~~-----~~~~~i~~~~~~~~~~l~~~~~~~~--~~nv~v~~~vp~---~~ll 340 (454)
+++.|+++.|...... .+..++++++. .+..+++..+.+. .+.+.+.+.. .++|.+.+++++ ..++
T Consensus 197 ~~~~vl~~~gr~~~~k--~~~~ll~a~~~l~~~~~~~~lv~~~g~~~--~~~~~l~~~~~~~~~v~~~g~~g~~~~~~~~ 272 (376)
T 1v4v_A 197 EGPYVTVTMHRRENWP--LLSDLAQALKRVAEAFPHLTFVYPVHLNP--VVREAVFPVLKGVRNFVLLDPLEYGSMAALM 272 (376)
T ss_dssp SSCEEEECCCCGGGGG--GHHHHHHHHHHHHHHCTTSEEEEECCSCH--HHHHHHHHHHTTCTTEEEECCCCHHHHHHHH
T ss_pred CCCEEEEEeCcccchH--HHHHHHHHHHHHHhhCCCeEEEEECCCCH--HHHHHHHHHhccCCCEEEECCCCHHHHHHHH
Confidence 3457777777553221 23444444432 2456655545432 1112222211 258888866654 4788
Q ss_pred cccCcceEEecCCchhHHHHHHcCCCeeccccccchhHHHHHHHHhhceeecCcCCCCCHHHHHHHHHHHhcCc
Q 012893 341 EHSSVCVFVTHCGWNSTIEGITGGVPMVCRPVFADQALNQRIIETAWGIGVGVXGEKFTKDETVNALKQVLSSE 414 (454)
Q Consensus 341 ~~~~~~~~I~HgG~gsv~eal~~GvP~i~~P~~~DQ~~nA~~v~~~~G~G~~~~~~~~~~~~l~~av~~vl~~~ 414 (454)
..++ ++|+++| |.+.||+++|+|+|+.+..+++.. +.+. |.|..++ .+++.|.+++.++++|+
T Consensus 273 ~~ad--~~v~~S~-g~~lEA~a~G~PvI~~~~~~~~~~----~~~~-g~g~lv~---~d~~~la~~i~~ll~d~ 335 (376)
T 1v4v_A 273 RASL--LLVTDSG-GLQEEGAALGVPVVVLRNVTERPE----GLKA-GILKLAG---TDPEGVYRVVKGLLENP 335 (376)
T ss_dssp HTEE--EEEESCH-HHHHHHHHTTCCEEECSSSCSCHH----HHHH-TSEEECC---SCHHHHHHHHHHHHTCH
T ss_pred HhCc--EEEECCc-CHHHHHHHcCCCEEeccCCCcchh----hhcC-CceEECC---CCHHHHHHHHHHHHhCh
Confidence 7766 9999984 556699999999999887666655 3467 8888885 38999999999999986
No 27
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=99.38 E-value=2.5e-12 Score=126.00 Aligned_cols=131 Identities=13% Similarity=0.107 Sum_probs=84.7
Q ss_pred CCCcEEEEeeCCCCCCCHHHHHHHHHHHHh-----cCCCEEEEEcCCcccccchhhhhh--hCCCceEeeccC---hHhh
Q 012893 270 ENASVIYISFGSMITPPRAEVIALAEALEA-----IGFPFLWSFRGNAEEQLPKGFLER--TKSYGKVVPWAP---QLKI 339 (454)
Q Consensus 270 ~~~~~v~vs~Gs~~~~~~~~~~~~~~~~~~-----~~~~~i~~~~~~~~~~l~~~~~~~--~~~nv~v~~~vp---~~~l 339 (454)
+++++|+++.+-....... +..+++++.. .+.++++.++.+. .+.+.+.+. ..+|+.+.++++ ...+
T Consensus 228 ~~~~~vlv~~hR~~~~~~~-~~~ll~A~~~l~~~~~~~~~v~~~g~~~--~~~~~l~~~~~~~~~v~~~~~lg~~~~~~l 304 (396)
T 3dzc_A 228 ASKKLILVTGHRRESFGGG-FERICQALITTAEQHPECQILYPVHLNP--NVREPVNKLLKGVSNIVLIEPQQYLPFVYL 304 (396)
T ss_dssp TTSEEEEEECSCBCCCTTH-HHHHHHHHHHHHHHCTTEEEEEECCBCH--HHHHHHHHHTTTCTTEEEECCCCHHHHHHH
T ss_pred CCCCEEEEEECCcccchhH-HHHHHHHHHHHHHhCCCceEEEEeCCCh--HHHHHHHHHHcCCCCEEEeCCCCHHHHHHH
Confidence 3456777776322222222 3455555543 3566666655431 111222221 236888887775 4577
Q ss_pred hcccCcceEEecCCchhHHHHHHcCCCeeccccccchhHHHHHHHHhhceeecCcCCCCCHHHHHHHHHHHhcCc
Q 012893 340 LEHSSVCVFVTHCGWNSTIEGITGGVPMVCRPVFADQALNQRIIETAWGIGVGVXGEKFTKDETVNALKQVLSSE 414 (454)
Q Consensus 340 l~~~~~~~~I~HgG~gsv~eal~~GvP~i~~P~~~DQ~~nA~~v~~~~G~G~~~~~~~~~~~~l~~av~~vl~~~ 414 (454)
++.++ ++|+-+| |.+.||+++|+|+|+..-.++++. +.+. |.++.+.. +++.|.+++.++++|+
T Consensus 305 ~~~ad--~vv~~SG-g~~~EA~a~G~PvV~~~~~~~~~e----~v~~-G~~~lv~~---d~~~l~~ai~~ll~d~ 368 (396)
T 3dzc_A 305 MDRAH--IILTDSG-GIQEEAPSLGKPVLVMRETTERPE----AVAA-GTVKLVGT---NQQQICDALSLLLTDP 368 (396)
T ss_dssp HHHCS--EEEESCS-GGGTTGGGGTCCEEECCSSCSCHH----HHHH-TSEEECTT---CHHHHHHHHHHHHHCH
T ss_pred HHhcC--EEEECCc-cHHHHHHHcCCCEEEccCCCcchH----HHHc-CceEEcCC---CHHHHHHHHHHHHcCH
Confidence 87877 9999998 666899999999999865555532 4567 88877653 6899999999999986
No 28
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=99.37 E-value=8.4e-12 Score=122.45 Aligned_cols=161 Identities=11% Similarity=0.071 Sum_probs=96.2
Q ss_pred CCCcEEEEeeCCCCCCCHHHHHHHHHHHHh-----cCCCEEEEEcCCcccccchhhhhh--hCCCceEeeccC---hHhh
Q 012893 270 ENASVIYISFGSMITPPRAEVIALAEALEA-----IGFPFLWSFRGNAEEQLPKGFLER--TKSYGKVVPWAP---QLKI 339 (454)
Q Consensus 270 ~~~~~v~vs~Gs~~~~~~~~~~~~~~~~~~-----~~~~~i~~~~~~~~~~l~~~~~~~--~~~nv~v~~~vp---~~~l 339 (454)
+++++++++.|....... .+..+++++.. .+.++++..+++. .+.+.+.+. ..+|+.+.++++ ...+
T Consensus 222 ~~~~~vlv~~~r~~~~~~-~l~~ll~a~~~l~~~~~~~~~v~~~~~~~--~~~~~l~~~~~~~~~v~l~~~l~~~~~~~l 298 (403)
T 3ot5_A 222 GDNRLILMTAHRRENLGE-PMQGMFEAVREIVESREDTELVYPMHLNP--AVREKAMAILGGHERIHLIEPLDAIDFHNF 298 (403)
T ss_dssp TTCEEEEECCCCHHHHTT-HHHHHHHHHHHHHHHCTTEEEEEECCSCH--HHHHHHHHHHTTCTTEEEECCCCHHHHHHH
T ss_pred cCCCEEEEEeCcccccCc-HHHHHHHHHHHHHHhCCCceEEEecCCCH--HHHHHHHHHhCCCCCEEEeCCCCHHHHHHH
Confidence 345677777664211111 13444444432 3556776655432 111112111 236899999886 3477
Q ss_pred hcccCcceEEecCCchhHHHHHHcCCCeeccccccchhHHHHHHHHhhceeecCcCCCCCHHHHHHHHHHHhcCchHHHH
Q 012893 340 LEHSSVCVFVTHCGWNSTIEGITGGVPMVCRPVFADQALNQRIIETAWGIGVGVXGEKFTKDETVNALKQVLSSEEGKRM 419 (454)
Q Consensus 340 l~~~~~~~~I~HgG~gsv~eal~~GvP~i~~P~~~DQ~~nA~~v~~~~G~G~~~~~~~~~~~~l~~av~~vl~~~~~~~~ 419 (454)
++.++ ++|+.+|. ...||+++|+|+|+.|..++++. +.+. |.|+.+.. ++++|.+++.++++|+ ..
T Consensus 299 ~~~ad--~vv~~SGg-~~~EA~a~g~PvV~~~~~~~~~e----~v~~-g~~~lv~~---d~~~l~~ai~~ll~~~---~~ 364 (403)
T 3ot5_A 299 LRKSY--LVFTDSGG-VQEEAPGMGVPVLVLRDTTERPE----GIEA-GTLKLIGT---NKENLIKEALDLLDNK---ES 364 (403)
T ss_dssp HHHEE--EEEECCHH-HHHHGGGTTCCEEECCSSCSCHH----HHHH-TSEEECCS---CHHHHHHHHHHHHHCH---HH
T ss_pred HHhcC--EEEECCcc-HHHHHHHhCCCEEEecCCCcchh----heeC-CcEEEcCC---CHHHHHHHHHHHHcCH---HH
Confidence 77777 99998853 33699999999999976666654 2478 98887763 7999999999999986 33
Q ss_pred HHHHHHHHHHHHHHHhhCCChHHHHHHHHHHH
Q 012893 420 RENVGALKKLAFKAVESDGSSTKNFKALVEVV 451 (454)
Q Consensus 420 ~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 451 (454)
+++. ++.... .+.++++.+.++.+.+.+
T Consensus 365 ~~~m---~~~~~~-~g~~~aa~rI~~~l~~~l 392 (403)
T 3ot5_A 365 HDKM---AQAANP-YGDGFAANRILAAIKSHF 392 (403)
T ss_dssp HHHH---HHSCCT-TCCSCHHHHHHHHHHHHH
T ss_pred HHHH---HhhcCc-ccCCcHHHHHHHHHHHHh
Confidence 3322 222222 233455555555554433
No 29
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=99.35 E-value=2.3e-10 Score=112.17 Aligned_cols=324 Identities=12% Similarity=0.051 Sum_probs=166.4
Q ss_pred CCCCcEEEEEcCC----CccCHHHHHHHHHHHhhhcCCCcEEEEEEeCCCcCccccccccccCCCCeeEEeCCCCCCCCC
Q 012893 7 STQRRHVAVLAFP----FGTHAAPLLDLVRRLSEAALEEEVTFSFFSTAQSNGSLFMEKDELRDCKIVPYNVESGLPEGF 82 (454)
Q Consensus 7 ~~~~~~il~~~~~----~~GH~~p~l~la~~L~~~~~G~~h~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 82 (454)
..+||||+++... ..|.-.-+..++++| .++| |+|++++............ .. .+ ++..++...
T Consensus 17 ~~~~MkIl~i~~~~~~~~gG~~~~~~~l~~~L--~~~G--~~V~v~~~~~~~~~~~~~~-~~--~~-~~~~~~~~~---- 84 (406)
T 2gek_A 17 RGSHMRIGMVCPYSFDVPGGVQSHVLQLAEVL--RDAG--HEVSVLAPASPHVKLPDYV-VS--GG-KAVPIPYNG---- 84 (406)
T ss_dssp ----CEEEEECSSCTTSCCHHHHHHHHHHHHH--HHTT--CEEEEEESCCTTSCCCTTE-EE--CC-CCC----------
T ss_pred CCCcceEEEEeccCCCCCCcHHHHHHHHHHHH--HHCC--CeEEEEecCCccccCCccc-cc--CC-cEEeccccC----
Confidence 4557999999852 267778899999999 8899 9999999865433111110 00 01 222222000
Q ss_pred CCCCCCcchHHHHHHhchHHHHHHHHHHHHhcCCCccEEEEcCch--hhHHHHHHHcCCCeEEEeCchhhhhhhhhchhH
Q 012893 83 RFTGNPREPVEHFLKATPGNFVRALEKAVAKTGLEISCLITDAFL--WFAAEMAEEMRVPWIAYWTAGPRSLLAHVDSDI 160 (454)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pD~vi~d~~~--~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~ 160 (454)
....+ .........+.++++.. +||+|++.... ..+..++...|+|+|...........
T Consensus 85 --------~~~~~--~~~~~~~~~l~~~l~~~--~~Dii~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~------- 145 (406)
T 2gek_A 85 --------SVARL--RFGPATHRKVKKWIAEG--DFDVLHIHEPNAPSLSMLALQAAEGPIVATFHTSTTKSL------- 145 (406)
T ss_dssp ----------------CCHHHHHHHHHHHHHH--CCSEEEEECCCSSSHHHHHHHHEESSEEEEECCCCCSHH-------
T ss_pred --------Ccccc--cccHHHHHHHHHHHHhc--CCCEEEECCccchHHHHHHHHhcCCCEEEEEcCcchhhh-------
Confidence 00000 00011112234444444 89999876432 34556778889999986543110000
Q ss_pred HHhhhCCCCCCCCccccCCCCCcCCcCCCCCcccCCCCCCcHHHHHHH-hccccCCccEEEecCcccCCHHHHHHHHhcc
Q 012893 161 IREIIGVNGPENQTLESIPGFSSIRAKDLPEGIISGPLDSPFPIMLDK-MGKTLPKATVVAINSYEELDPIVVETLKSRF 239 (454)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 239 (454)
. ...+.+ +...+..++.+++.+... .......+
T Consensus 146 ~-----------------------------------------~~~~~~~~~~~~~~~d~ii~~s~~~-----~~~~~~~~ 179 (406)
T 2gek_A 146 T-----------------------------------------LSVFQGILRPYHEKIIGRIAVSDLA-----RRWQMEAL 179 (406)
T ss_dssp H-----------------------------------------HHHHHSTTHHHHTTCSEEEESSHHH-----HHHHHHHH
T ss_pred h-----------------------------------------HHHHHHHHHHHHhhCCEEEECCHHH-----HHHHHHhc
Confidence 0 000000 001133466666655221 11112222
Q ss_pred --CCeEEeccCCCCCC-CCCCCCCCccchhccCCCCcEEEEeeCCC-CCC-CHHHHHHHHHHHHh--cCCCEEEEEcCCc
Q 012893 240 --RKFLNVGPSTLTSP-PPVSDPHGCLPWLNEHENASVIYISFGSM-ITP-PRAEVIALAEALEA--IGFPFLWSFRGNA 312 (454)
Q Consensus 240 --~~~~~vGp~~~~~~-~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~-~~~-~~~~~~~~~~~~~~--~~~~~i~~~~~~~ 312 (454)
+++ .++....... ........ +. .+ ..+++..|+. ... ..+.+...+..+.+ .+.+++++..+..
T Consensus 180 ~~~~~-vi~~~v~~~~~~~~~~~~~----~~--~~-~~~i~~~G~~~~~~Kg~~~li~a~~~l~~~~~~~~l~i~G~~~~ 251 (406)
T 2gek_A 180 GSDAV-EIPNGVDVASFADAPLLDG----YP--RE-GRTVLFLGRYDEPRKGMAVLLAALPKLVARFPDVEILIVGRGDE 251 (406)
T ss_dssp SSCEE-ECCCCBCHHHHHTCCCCTT----CS--CS-SCEEEEESCTTSGGGCHHHHHHHHHHHHTTSTTCEEEEESCSCH
T ss_pred CCCcE-EecCCCChhhcCCCchhhh----cc--CC-CeEEEEEeeeCccccCHHHHHHHHHHHHHHCCCeEEEEEcCCcH
Confidence 234 4443221110 00000000 00 11 2466677877 432 23333334444433 2455555433322
Q ss_pred ccccchhhhhhhCCCceEeeccCh---HhhhcccCcceEEec----CCc-hhHHHHHHcCCCeeccccccchhHHHHHHH
Q 012893 313 EEQLPKGFLERTKSYGKVVPWAPQ---LKILEHSSVCVFVTH----CGW-NSTIEGITGGVPMVCRPVFADQALNQRIIE 384 (454)
Q Consensus 313 ~~~l~~~~~~~~~~nv~v~~~vp~---~~ll~~~~~~~~I~H----gG~-gsv~eal~~GvP~i~~P~~~DQ~~nA~~v~ 384 (454)
..+.+ ..+...+||.+.+++++ ..++..++ ++|.- .|+ .++.||+++|+|+|+.+. ......+.
T Consensus 252 -~~l~~-~~~~~~~~v~~~g~~~~~~~~~~~~~ad--v~v~ps~~~e~~~~~~~Ea~a~G~PvI~~~~----~~~~e~i~ 323 (406)
T 2gek_A 252 -DELRE-QAGDLAGHLRFLGQVDDATKASAMRSAD--VYCAPHLGGESFGIVLVEAMAAGTAVVASDL----DAFRRVLA 323 (406)
T ss_dssp -HHHHH-HTGGGGGGEEECCSCCHHHHHHHHHHSS--EEEECCCSCCSSCHHHHHHHHHTCEEEECCC----HHHHHHHT
T ss_pred -HHHHH-HHHhccCcEEEEecCCHHHHHHHHHHCC--EEEecCCCCCCCchHHHHHHHcCCCEEEecC----CcHHHHhc
Confidence 11111 11122478999999996 48888887 77744 343 489999999999998755 45667777
Q ss_pred HhhceeecCcCCCCCHHHHHHHHHHHhcCchH-HHHHHHHHHH
Q 012893 385 TAWGIGVGVXGEKFTKDETVNALKQVLSSEEG-KRMRENVGAL 426 (454)
Q Consensus 385 ~~~G~G~~~~~~~~~~~~l~~av~~vl~~~~~-~~~~~~a~~l 426 (454)
.. +.|..++.. +.+++.++|.++++|++. ..+.+++++.
T Consensus 324 ~~-~~g~~~~~~--d~~~l~~~i~~l~~~~~~~~~~~~~~~~~ 363 (406)
T 2gek_A 324 DG-DAGRLVPVD--DADGMAAALIGILEDDQLRAGYVARASER 363 (406)
T ss_dssp TT-TSSEECCTT--CHHHHHHHHHHHHHCHHHHHHHHHHHHHH
T ss_pred CC-CceEEeCCC--CHHHHHHHHHHHHcCHHHHHHHHHHHHHH
Confidence 77 788888754 789999999999998621 3344444433
No 30
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=99.35 E-value=1.5e-10 Score=112.96 Aligned_cols=324 Identities=14% Similarity=0.077 Sum_probs=173.1
Q ss_pred CCCCcEEEEEcC--C--CccCHHHHHHHHHHHhhhcCCCcEEEEEEeCCCcCc---cccccccccCCCCeeEEeCCCCCC
Q 012893 7 STQRRHVAVLAF--P--FGTHAAPLLDLVRRLSEAALEEEVTFSFFSTAQSNG---SLFMEKDELRDCKIVPYNVESGLP 79 (454)
Q Consensus 7 ~~~~~~il~~~~--~--~~GH~~p~l~la~~L~~~~~G~~h~V~~~~~~~~~~---~~~~~~~~~~~~~~~~~~i~~~~~ 79 (454)
|+++|||++++. + ..|.-.-+..|++.| +| |+|++++...... ..... .++.+..++....
T Consensus 1 M~~~mkIl~v~~~~~p~~gG~~~~~~~l~~~L----~g--~~v~v~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~ 68 (394)
T 3okp_A 1 MSASRKTLVVTNDFPPRIGGIQSYLRDFIATQ----DP--ESIVVFASTQNAEEAHAYDKT------LDYEVIRWPRSVM 68 (394)
T ss_dssp ---CCCEEEEESCCTTSCSHHHHHHHHHHTTS----CG--GGEEEEEECSSHHHHHHHHTT------CSSEEEEESSSSC
T ss_pred CCCCceEEEEeCccCCccchHHHHHHHHHHHh----cC--CeEEEEECCCCccchhhhccc------cceEEEEcccccc
Confidence 356789999875 3 578888899999999 48 9999999865433 11122 3788877763111
Q ss_pred CCCCCCCCCcchHHHHHHhchHHHHHHHHHHHHhcCCCccEEEEcCch--hhHHHHHHHcCCCeEEEe-Cchhhhhhhhh
Q 012893 80 EGFRFTGNPREPVEHFLKATPGNFVRALEKAVAKTGLEISCLITDAFL--WFAAEMAEEMRVPWIAYW-TAGPRSLLAHV 156 (454)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pD~vi~d~~~--~~~~~~A~~lgiP~v~~~-~~~~~~~~~~~ 156 (454)
. ... .....+.++++.. +||+|++.... .....++..+|+|.+.+. ........
T Consensus 69 ~---------~~~---------~~~~~l~~~~~~~--~~Dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~--- 125 (394)
T 3okp_A 69 L---------PTP---------TTAHAMAEIIRER--EIDNVWFGAAAPLALMAGTAKQAGASKVIASTHGHEVGWS--- 125 (394)
T ss_dssp C---------SCH---------HHHHHHHHHHHHT--TCSEEEESSCTTGGGGHHHHHHTTCSEEEEECCSTHHHHT---
T ss_pred c---------cch---------hhHHHHHHHHHhc--CCCEEEECCcchHHHHHHHHHhcCCCcEEEEeccchhhhh---
Confidence 0 011 1112234445544 89999976432 234456889999955433 21111000
Q ss_pred chhHHHhhhCCCCCCCCccccCCCCCcCCcCCCCCcccCCCCCCcHHHHHHHhccccCCccEEEecCcccCCHHHHHHHH
Q 012893 157 DSDIIREIIGVNGPENQTLESIPGFSSIRAKDLPEGIISGPLDSPFPIMLDKMGKTLPKATVVAINSYEELDPIVVETLK 236 (454)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 236 (454)
............ ...++.++..+.... +...
T Consensus 126 -----------------------------------------~~~~~~~~~~~~---~~~~d~ii~~s~~~~-----~~~~ 156 (394)
T 3okp_A 126 -----------------------------------------MLPGSRQSLRKI---GTEVDVLTYISQYTL-----RRFK 156 (394)
T ss_dssp -----------------------------------------TSHHHHHHHHHH---HHHCSEEEESCHHHH-----HHHH
T ss_pred -----------------------------------------hcchhhHHHHHH---HHhCCEEEEcCHHHH-----HHHH
Confidence 000001111111 234667776553221 1222
Q ss_pred hc---cCCeEEeccCCCCCC-CCCCC--CCCccchhccCCCCcEEEEeeCCCCCC-CHHHHHHHHHHHHh--cCCCEEEE
Q 012893 237 SR---FRKFLNVGPSTLTSP-PPVSD--PHGCLPWLNEHENASVIYISFGSMITP-PRAEVIALAEALEA--IGFPFLWS 307 (454)
Q Consensus 237 ~~---~~~~~~vGp~~~~~~-~~~~~--~~~~~~~l~~~~~~~~v~vs~Gs~~~~-~~~~~~~~~~~~~~--~~~~~i~~ 307 (454)
.. ..++..+..-..... .+... ...+..-++. ++...+++..|+.... ..+.+...+..+.+ .+.+++++
T Consensus 157 ~~~~~~~~~~vi~ngv~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~G~~~~~Kg~~~li~a~~~l~~~~~~~~l~i~ 235 (394)
T 3okp_A 157 SAFGSHPTFEHLPSGVDVKRFTPATPEDKSATRKKLGF-TDTTPVIACNSRLVPRKGQDSLIKAMPQVIAARPDAQLLIV 235 (394)
T ss_dssp HHHCSSSEEEECCCCBCTTTSCCCCHHHHHHHHHHTTC-CTTCCEEEEESCSCGGGCHHHHHHHHHHHHHHSTTCEEEEE
T ss_pred HhcCCCCCeEEecCCcCHHHcCCCCchhhHHHHHhcCC-CcCceEEEEEeccccccCHHHHHHHHHHHHhhCCCeEEEEE
Confidence 21 135666654332221 11000 0111111111 2223566677887432 23333333343433 25566655
Q ss_pred EcCCcccccchhhhhhhCCCceEeeccChH---hhhcccCcceEEe-----------cCCchhHHHHHHcCCCeeccccc
Q 012893 308 FRGNAEEQLPKGFLERTKSYGKVVPWAPQL---KILEHSSVCVFVT-----------HCGWNSTIEGITGGVPMVCRPVF 373 (454)
Q Consensus 308 ~~~~~~~~l~~~~~~~~~~nv~v~~~vp~~---~ll~~~~~~~~I~-----------HgG~gsv~eal~~GvP~i~~P~~ 373 (454)
..+.....+. .......++|.+.+++|+. .++..++ ++|. -|.-.++.||+++|+|+|+.+..
T Consensus 236 G~g~~~~~l~-~~~~~~~~~v~~~g~~~~~~~~~~~~~ad--~~v~ps~~~~~~~~~e~~~~~~~Ea~a~G~PvI~~~~~ 312 (394)
T 3okp_A 236 GSGRYESTLR-RLATDVSQNVKFLGRLEYQDMINTLAAAD--IFAMPARTRGGGLDVEGLGIVYLEAQACGVPVIAGTSG 312 (394)
T ss_dssp CCCTTHHHHH-HHTGGGGGGEEEEESCCHHHHHHHHHHCS--EEEECCCCBGGGTBCCSSCHHHHHHHHTTCCEEECSST
T ss_pred cCchHHHHHH-HHHhcccCeEEEcCCCCHHHHHHHHHhCC--EEEecCccccccccccccCcHHHHHHHcCCCEEEeCCC
Confidence 4433221111 1112334789999999854 5777777 7776 45567899999999999997764
Q ss_pred cchhHHHHHHHHhhceeecCcCCCCCHHHHHHHHHHHhcCchH-HHHHHHHHHH
Q 012893 374 ADQALNQRIIETAWGIGVGVXGEKFTKDETVNALKQVLSSEEG-KRMRENVGAL 426 (454)
Q Consensus 374 ~DQ~~nA~~v~~~~G~G~~~~~~~~~~~~l~~av~~vl~~~~~-~~~~~~a~~l 426 (454)
+-+. +... |.|..++.. +.+++.++|.++++|++. +.+.+++++.
T Consensus 313 ~~~e-----~i~~-~~g~~~~~~--d~~~l~~~i~~l~~~~~~~~~~~~~~~~~ 358 (394)
T 3okp_A 313 GAPE-----TVTP-ATGLVVEGS--DVDKLSELLIELLDDPIRRAAMGAAGRAH 358 (394)
T ss_dssp TGGG-----GCCT-TTEEECCTT--CHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred ChHH-----HHhc-CCceEeCCC--CHHHHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence 3222 1233 567777654 799999999999998732 4455555443
No 31
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=99.34 E-value=2.2e-10 Score=113.30 Aligned_cols=361 Identities=16% Similarity=0.091 Sum_probs=179.2
Q ss_pred CCcEEEEEcCC-----CccCHHHHHHHHHHHhhhcCCCcEEEEEEeCCCcCccccc--------------ccc-ccCCCC
Q 012893 9 QRRHVAVLAFP-----FGTHAAPLLDLVRRLSEAALEEEVTFSFFSTAQSNGSLFM--------------EKD-ELRDCK 68 (454)
Q Consensus 9 ~~~~il~~~~~-----~~GH~~p~l~la~~L~~~~~G~~h~V~~~~~~~~~~~~~~--------------~~~-~~~~~~ 68 (454)
++|||++++.. ..|--.-+..|+++| .++| |+|+++++......-.. ... .. .|
T Consensus 1 r~MkIl~v~~~~~p~~~gG~~~~~~~la~~L--~~~G--~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~g 74 (439)
T 3fro_A 1 RHMKVLLLGFEFLPVKVGGLAEALTAISEAL--ASLG--HEVLVFTPSHGRFQGEEIGKIRVFGEEVQVKVSYEER--GN 74 (439)
T ss_dssp CCCEEEEECSCCTTSCSSSHHHHHHHHHHHH--HHTT--CEEEEEEECTTCSCCEEEEEEEETTEEEEEEEEEEEE--TT
T ss_pred CceEEEEEecccCCcccCCHHHHHHHHHHHH--HHCC--CeEEEEecCCCCchhhhhccccccCcccceeeeeccC--CC
Confidence 46899999842 456666788999999 8999 99999996533221100 000 01 37
Q ss_pred eeEEeCCCCCCCCCCCCCCCcc-hHHHHHHhchHHHHHHHHHHHHhc---CCCccEEEEcCch--hhHHHHHHHcCCCeE
Q 012893 69 IVPYNVESGLPEGFRFTGNPRE-PVEHFLKATPGNFVRALEKAVAKT---GLEISCLITDAFL--WFAAEMAEEMRVPWI 142 (454)
Q Consensus 69 ~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~---~~~pD~vi~d~~~--~~~~~~A~~lgiP~v 142 (454)
++++.++..+-.. ..... ....+.... ..+...+..++... ..+||+|.+.... ..+..++...|+|+|
T Consensus 75 v~v~~~~~~~~~~----~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~Dii~~~~~~~~~~~~~~~~~~~~~~v 149 (439)
T 3fro_A 75 LRIYRIGGGLLDS----EDVYGPGWDGLIRKA-VTFGRASVLLLNDLLREEPLPDVVHFHDWHTVFAGALIKKYFKIPAV 149 (439)
T ss_dssp EEEEEEESGGGGC----SSTTCSHHHHHHHHH-HHHHHHHHHHHHHHTTTSCCCSEEEEESGGGHHHHHHHHHHHCCCEE
T ss_pred ceEEEecchhccc----cccccCCcchhhhhh-HHHHHHHHHHHHHHhccCCCCeEEEecchhhhhhHHHHhhccCCCEE
Confidence 7777775311000 00111 111111111 11111122223322 3589999887433 235567788999999
Q ss_pred EEeCchhhhhhhhhchhHHHhhhCCCCCCCCccccCCCCCcCCcCCCCCcccCCCCCCcHHHHHHHhccccCCccEEEec
Q 012893 143 AYWTAGPRSLLAHVDSDIIREIIGVNGPENQTLESIPGFSSIRAKDLPEGIISGPLDSPFPIMLDKMGKTLPKATVVAIN 222 (454)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (454)
........... ...... ...+ ..+.. .......+...+ .++.++..
T Consensus 150 ~~~h~~~~~~~---~~~~~~---------------~~~~-----~~~~~-----~~~~~~~~~~~~------~ad~ii~~ 195 (439)
T 3fro_A 150 FTIHRLNKSKL---PAFYFH---------------EAGL-----SELAP-----YPDIDPEHTGGY------IADIVTTV 195 (439)
T ss_dssp EEESCCCCCCE---EHHHHH---------------HTTC-----GGGCC-----SSEECHHHHHHH------HCSEEEES
T ss_pred EEecccccccC---chHHhC---------------cccc-----ccccc-----cceeeHhhhhhh------hccEEEec
Confidence 87543321000 000000 0000 00000 000012222222 36667765
Q ss_pred CcccCCHHHHHHHHhccCCeEEeccCCCCCC-CCCC-------CCCCccchhccCCCCcEEEEeeCCCC-CC-CHHHHHH
Q 012893 223 SYEELDPIVVETLKSRFRKFLNVGPSTLTSP-PPVS-------DPHGCLPWLNEHENASVIYISFGSMI-TP-PRAEVIA 292 (454)
Q Consensus 223 ~~~~l~~~~~~~~~~~~~~~~~vGp~~~~~~-~~~~-------~~~~~~~~l~~~~~~~~v~vs~Gs~~-~~-~~~~~~~ 292 (454)
+....+. ..........++..+..-..... .+.. ....+..-++. ++. .+++..|+.. .. ..+.+..
T Consensus 196 S~~~~~~-~~~~~~~~~~~i~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~i~~~G~~~~~~Kg~~~li~ 272 (439)
T 3fro_A 196 SRGYLID-EWGFFRNFEGKITYVFNGIDCSFWNESYLTGSRDERKKSLLSKFGM-DEG-VTFMFIGRFDRGQKGVDVLLK 272 (439)
T ss_dssp CHHHHHH-THHHHGGGTTSEEECCCCCCTTTSCGGGSCSCHHHHHHHHHHHHTC-CSC-EEEEEECCSSCTTBCHHHHHH
T ss_pred CHHHHHH-HhhhhhhcCCceeecCCCCCchhcCcccccchhhhhHHHHHHHcCC-CCC-cEEEEEcccccccccHHHHHH
Confidence 5332221 11111112245666553332211 1100 00011111111 223 6777888886 43 3455555
Q ss_pred HHHHHHh----cCCCEEEEEcCCcc-cccchhhhhhhCCCceEeeccChH---hhhcccCcceEEec----CCchhHHHH
Q 012893 293 LAEALEA----IGFPFLWSFRGNAE-EQLPKGFLERTKSYGKVVPWAPQL---KILEHSSVCVFVTH----CGWNSTIEG 360 (454)
Q Consensus 293 ~~~~~~~----~~~~~i~~~~~~~~-~~l~~~~~~~~~~nv~v~~~vp~~---~ll~~~~~~~~I~H----gG~gsv~ea 360 (454)
.+..+.+ .+.+++++..+... ...-....+..++++.+.+++++. .++..++ ++|.- |--.++.||
T Consensus 273 a~~~l~~~~~~~~~~l~i~G~g~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~ad--v~v~ps~~e~~~~~~~EA 350 (439)
T 3fro_A 273 AIEILSSKKEFQEMRFIIIGKGDPELEGWARSLEEKHGNVKVITEMLSREFVRELYGSVD--FVIIPSYFEPFGLVALEA 350 (439)
T ss_dssp HHHHHHTSGGGGGEEEEEECCCCHHHHHHHHHHHHHCTTEEEECSCCCHHHHHHHHTTCS--EEEECBSCCSSCHHHHHH
T ss_pred HHHHHHhcccCCCeEEEEEcCCChhHHHHHHHHHhhcCCEEEEcCCCCHHHHHHHHHHCC--EEEeCCCCCCccHHHHHH
Confidence 5555554 34555555433211 011112222233444556889975 5677777 77744 334689999
Q ss_pred HHcCCCeeccccccchhHHHHHHHHhhceeecCcCCCCCHHHHHHHHHHHhc-Cch-HHHHHHHHHHHH
Q 012893 361 ITGGVPMVCRPVFADQALNQRIIETAWGIGVGVXGEKFTKDETVNALKQVLS-SEE-GKRMRENVGALK 427 (454)
Q Consensus 361 l~~GvP~i~~P~~~DQ~~nA~~v~~~~G~G~~~~~~~~~~~~l~~av~~vl~-~~~-~~~~~~~a~~l~ 427 (454)
+++|+|+|+.... .....+ +. |.|..++.. +.++++++|.++++ |++ .+.+.+++++..
T Consensus 351 ma~G~Pvi~s~~~----~~~e~~-~~-~~g~~~~~~--d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~ 411 (439)
T 3fro_A 351 MCLGAIPIASAVG----GLRDII-TN-ETGILVKAG--DPGELANAILKALELSRSDLSKFRENCKKRA 411 (439)
T ss_dssp HHTTCEEEEESST----HHHHHC-CT-TTCEEECTT--CHHHHHHHHHHHHHHTTTTTHHHHHHHHHHH
T ss_pred HHCCCCeEEcCCC----CcceeE-Ec-CceEEeCCC--CHHHHHHHHHHHHhcCHHHHHHHHHHHHHHH
Confidence 9999999986542 333333 35 777777764 89999999999998 763 356666666554
No 32
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=99.27 E-value=1.2e-09 Score=105.96 Aligned_cols=130 Identities=11% Similarity=0.062 Sum_probs=82.2
Q ss_pred CCcEEEEeeCCCCCCCHHHHHHHHHHHHh-----cCCCEEEEEcCCcccccchhhhhhhC--CCceEeeccCh---Hhhh
Q 012893 271 NASVIYISFGSMITPPRAEVIALAEALEA-----IGFPFLWSFRGNAEEQLPKGFLERTK--SYGKVVPWAPQ---LKIL 340 (454)
Q Consensus 271 ~~~~v~vs~Gs~~~~~~~~~~~~~~~~~~-----~~~~~i~~~~~~~~~~l~~~~~~~~~--~nv~v~~~vp~---~~ll 340 (454)
++++++++.|...... ..+..+++++.. .+.++++..++. ..+.+...+... +||.+.+++++ ..++
T Consensus 204 ~~~~vl~~~gr~~~~~-K~~~~li~a~~~l~~~~~~~~~i~~~g~~--~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~ 280 (375)
T 3beo_A 204 NNRLVLMTAHRRENLG-EPMRNMFRAIKRLVDKHEDVQVVYPVHMN--PVVRETANDILGDYGRIHLIEPLDVIDFHNVA 280 (375)
T ss_dssp TSEEEEEECCCGGGTT-HHHHHHHHHHHHHHHHCTTEEEEEECCSC--HHHHHHHHHHHTTCTTEEEECCCCHHHHHHHH
T ss_pred CCCeEEEEecccccch-hHHHHHHHHHHHHHhhCCCeEEEEeCCCC--HHHHHHHHHHhhccCCEEEeCCCCHHHHHHHH
Confidence 3456777777654322 234455555543 244544432221 111222222222 68888777765 4677
Q ss_pred cccCcceEEecCCchhHHHHHHcCCCeeccccccchhHHHHHHHHhhceeecCcCCCCCHHHHHHHHHHHhcCc
Q 012893 341 EHSSVCVFVTHCGWNSTIEGITGGVPMVCRPVFADQALNQRIIETAWGIGVGVXGEKFTKDETVNALKQVLSSE 414 (454)
Q Consensus 341 ~~~~~~~~I~HgG~gsv~eal~~GvP~i~~P~~~DQ~~nA~~v~~~~G~G~~~~~~~~~~~~l~~av~~vl~~~ 414 (454)
..++ ++|+.+| +++.||+++|+|+|+....+..+ .+.+. |.|..++. +.++|++++.++++|+
T Consensus 281 ~~ad--~~v~~sg-~~~lEA~a~G~Pvi~~~~~~~~~----e~v~~-g~g~~v~~---d~~~la~~i~~ll~~~ 343 (375)
T 3beo_A 281 ARSY--LMLTDSG-GVQEEAPSLGVPVLVLRDTTERP----EGIEA-GTLKLAGT---DEETIFSLADELLSDK 343 (375)
T ss_dssp HTCS--EEEECCH-HHHHHHHHHTCCEEECSSCCSCH----HHHHT-TSEEECCS---CHHHHHHHHHHHHHCH
T ss_pred HhCc--EEEECCC-ChHHHHHhcCCCEEEecCCCCCc----eeecC-CceEEcCC---CHHHHHHHHHHHHhCh
Confidence 7776 9998874 56889999999999885433332 24567 88888763 7899999999999986
No 33
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=99.27 E-value=6.1e-11 Score=115.52 Aligned_cols=130 Identities=15% Similarity=0.127 Sum_probs=85.4
Q ss_pred CCcEEEEeeCCCCCCCHHHHHHHHHHHHh-----cCCCEEEEEcCCcccccchhhhhhh--CCCceEeeccCh---Hhhh
Q 012893 271 NASVIYISFGSMITPPRAEVIALAEALEA-----IGFPFLWSFRGNAEEQLPKGFLERT--KSYGKVVPWAPQ---LKIL 340 (454)
Q Consensus 271 ~~~~v~vs~Gs~~~~~~~~~~~~~~~~~~-----~~~~~i~~~~~~~~~~l~~~~~~~~--~~nv~v~~~vp~---~~ll 340 (454)
++++++++.|......+ .+..+++++.. .+.++++..+.+. ...+.+.+.. .++|.+.+++++ ..++
T Consensus 204 ~~~~vl~~~gr~~~~~k-g~~~li~a~~~l~~~~~~~~l~i~~g~~~--~~~~~l~~~~~~~~~v~~~g~~~~~~~~~~~ 280 (384)
T 1vgv_A 204 DKKMILVTGHRRESFGR-GFEEICHALADIATTHQDIQIVYPVHLNP--NVREPVNRILGHVKNVILIDPQEYLPFVWLM 280 (384)
T ss_dssp TSEEEEEECCCBSSCCH-HHHHHHHHHHHHHHHCTTEEEEEECCBCH--HHHHHHHHHHTTCTTEEEECCCCHHHHHHHH
T ss_pred CCCEEEEEeCCccccch-HHHHHHHHHHHHHhhCCCeEEEEEcCCCH--HHHHHHHHHhhcCCCEEEeCCCCHHHHHHHH
Confidence 45678888887653322 23444444432 2456655444321 1112222211 268888776664 5778
Q ss_pred cccCcceEEecCCchhHHHHHHcCCCeeccccccchhHHHHHHHHhhceeecCcCCCCCHHHHHHHHHHHhcCc
Q 012893 341 EHSSVCVFVTHCGWNSTIEGITGGVPMVCRPVFADQALNQRIIETAWGIGVGVXGEKFTKDETVNALKQVLSSE 414 (454)
Q Consensus 341 ~~~~~~~~I~HgG~gsv~eal~~GvP~i~~P~~~DQ~~nA~~v~~~~G~G~~~~~~~~~~~~l~~av~~vl~~~ 414 (454)
..++ ++|+.+| |++.||+++|+|+|+.+..++... +.+. |.|..++. +++.|.++|.++++|+
T Consensus 281 ~~ad--~~v~~Sg-~~~lEA~a~G~PvI~~~~~~~~~e----~v~~-g~g~lv~~---d~~~la~~i~~ll~d~ 343 (384)
T 1vgv_A 281 NHAW--LILTDSG-GIQEEAPSLGKPVLVMRDTTERPE----AVTA-GTVRLVGT---DKQRIVEEVTRLLKDE 343 (384)
T ss_dssp HHCS--EEEESSS-TGGGTGGGGTCCEEEESSCCSCHH----HHHH-TSEEEECS---SHHHHHHHHHHHHHCH
T ss_pred HhCc--EEEECCc-chHHHHHHcCCCEEEccCCCCcch----hhhC-CceEEeCC---CHHHHHHHHHHHHhCh
Confidence 8877 8999985 458899999999999987444332 4567 88888764 8899999999999986
No 34
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=99.21 E-value=3.5e-09 Score=106.92 Aligned_cols=94 Identities=20% Similarity=0.216 Sum_probs=67.9
Q ss_pred CCCceEeeccChH---hhhccc----CcceEEecC---C-chhHHHHHHcCCCeeccccccchhHHHHHHHHhhceeecC
Q 012893 325 KSYGKVVPWAPQL---KILEHS----SVCVFVTHC---G-WNSTIEGITGGVPMVCRPVFADQALNQRIIETAWGIGVGV 393 (454)
Q Consensus 325 ~~nv~v~~~vp~~---~ll~~~----~~~~~I~Hg---G-~gsv~eal~~GvP~i~~P~~~DQ~~nA~~v~~~~G~G~~~ 393 (454)
.++|.+.+++|+. .++..+ + ++|.-. | -.++.||+++|+|+|+... ......+..- ..|..+
T Consensus 334 ~~~V~~~G~v~~~~~~~~~~~a~~~~d--v~v~pS~~Eg~~~~~lEAma~G~PvI~s~~----~g~~e~v~~~-~~g~l~ 406 (499)
T 2r60_A 334 RGKVSMFPLNSQQELAGCYAYLASKGS--VFALTSFYEPFGLAPVEAMASGLPAVVTRN----GGPAEILDGG-KYGVLV 406 (499)
T ss_dssp BTTEEEEECCSHHHHHHHHHHHHHTTC--EEEECCSCBCCCSHHHHHHHTTCCEEEESS----BHHHHHTGGG-TSSEEE
T ss_pred CceEEECCCCCHHHHHHHHHhcCcCCC--EEEECcccCCCCcHHHHHHHcCCCEEEecC----CCHHHHhcCC-ceEEEe
Confidence 4689999999753 677777 7 777433 3 3589999999999998753 3455556665 678888
Q ss_pred cCCCCCHHHHHHHHHHHhcCchH-HHHHHHHHHHH
Q 012893 394 XGEKFTKDETVNALKQVLSSEEG-KRMRENVGALK 427 (454)
Q Consensus 394 ~~~~~~~~~l~~av~~vl~~~~~-~~~~~~a~~l~ 427 (454)
+.. +.++++++|.++++|++. +.+.+++++..
T Consensus 407 ~~~--d~~~la~~i~~ll~~~~~~~~~~~~a~~~~ 439 (499)
T 2r60_A 407 DPE--DPEDIARGLLKAFESEETWSAYQEKGKQRV 439 (499)
T ss_dssp CTT--CHHHHHHHHHHHHSCHHHHHHHHHHHHHHH
T ss_pred CCC--CHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence 764 889999999999998732 44555554443
No 35
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=99.17 E-value=1.2e-08 Score=99.61 Aligned_cols=331 Identities=12% Similarity=0.088 Sum_probs=166.6
Q ss_pred CcEEEEEcCC-CccCHHHHHHHHHHHhhhcCCCcEEEEEEeCCCcCccccccccccCCCCeeEEeCCCC-CCCCCCCCCC
Q 012893 10 RRHVAVLAFP-FGTHAAPLLDLVRRLSEAALEEEVTFSFFSTAQSNGSLFMEKDELRDCKIVPYNVESG-LPEGFRFTGN 87 (454)
Q Consensus 10 ~~~il~~~~~-~~GH~~p~l~la~~L~~~~~G~~h~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~-~~~~~~~~~~ 87 (454)
++++....+| ..|.-.-...|+++| .++| |+|++++........... .++.+..++.. ++. . ..
T Consensus 15 ~~~~~~~~~p~~GG~~~~~~~la~~L--~~~G--~~V~v~~~~~~~~~~~~~------~~i~~~~~~~~~~~~-~---~~ 80 (394)
T 2jjm_A 15 KLKIGITCYPSVGGSGVVGTELGKQL--AERG--HEIHFITSGLPFRLNKVY------PNIYFHEVTVNQYSV-F---QY 80 (394)
T ss_dssp CCEEEEECCC--CHHHHHHHHHHHHH--HHTT--CEEEEECSSCC----CCC------TTEEEECCCCC-----C---CS
T ss_pred eeeeehhcCCCCCCHHHHHHHHHHHH--HhCC--CEEEEEeCCCCCcccccC------CceEEEecccccccc-c---cc
Confidence 4778888887 567778888999999 8899 999999985322111111 36777666411 110 0 00
Q ss_pred CcchHHHHHHhchHHHHHHHHHHHHhcCCCccEEEEcCchh--hHHHHHH-Hc--CCCeEEEeCchhhhhhhhhchhHHH
Q 012893 88 PREPVEHFLKATPGNFVRALEKAVAKTGLEISCLITDAFLW--FAAEMAE-EM--RVPWIAYWTAGPRSLLAHVDSDIIR 162 (454)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pD~vi~d~~~~--~~~~~A~-~l--giP~v~~~~~~~~~~~~~~~~~~~~ 162 (454)
....+. ....+.++++.. +||+|++..... ....++. .+ ++|+|.........
T Consensus 81 ~~~~~~---------~~~~l~~~l~~~--~~Dvv~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~----------- 138 (394)
T 2jjm_A 81 PPYDLA---------LASKMAEVAQRE--NLDILHVHYAIPHAICAYLAKQMIGERIKIVTTLHGTDIT----------- 138 (394)
T ss_dssp CCHHHH---------HHHHHHHHHHHH--TCSEEEECSSTTHHHHHHHHHHHTTTCSEEEEECCHHHHH-----------
T ss_pred ccccHH---------HHHHHHHHHHHc--CCCEEEEcchhHHHHHHHHHHHhhcCCCCEEEEEecCccc-----------
Confidence 111111 111223334444 899999874322 2223444 44 59988764332110
Q ss_pred hhhCCCCCCCCccccCCCCCcCCcCCCCCcccCCCCCCcHHHHHHHhccccCCccEEEecCcccCCHHHHHHHHhcc---
Q 012893 163 EIIGVNGPENQTLESIPGFSSIRAKDLPEGIISGPLDSPFPIMLDKMGKTLPKATVVAINSYEELDPIVVETLKSRF--- 239 (454)
Q Consensus 163 ~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~--- 239 (454)
..+.. .. ...+.... +..++.++..+... .+......
T Consensus 139 ---------------~~~~~--------------~~---~~~~~~~~---~~~ad~ii~~s~~~-----~~~~~~~~~~~ 178 (394)
T 2jjm_A 139 ---------------VLGSD--------------PS---LNNLIRFG---IEQSDVVTAVSHSL-----INETHELVKPN 178 (394)
T ss_dssp ---------------TTTTC--------------TT---THHHHHHH---HHHSSEEEESCHHH-----HHHHHHHTCCS
T ss_pred ---------------ccCCC--------------HH---HHHHHHHH---HhhCCEEEECCHHH-----HHHHHHhhCCc
Confidence 00000 00 01111111 23366777655221 12222222
Q ss_pred CCeEEeccCCCCCCCCCCCCCCccchhccCCCCcEEEEeeCCCCCC-CHHHHHHHHHHHHh-cCCCEEEEEcCCcccccc
Q 012893 240 RKFLNVGPSTLTSPPPVSDPHGCLPWLNEHENASVIYISFGSMITP-PRAEVIALAEALEA-IGFPFLWSFRGNAEEQLP 317 (454)
Q Consensus 240 ~~~~~vGp~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~-~~~~~~~~~~~~~~-~~~~~i~~~~~~~~~~l~ 317 (454)
.++..++.-............++..-++. ++...+++..|+.... ..+.+...+..+.+ .+.+++++..+.....+.
T Consensus 179 ~~~~vi~ngv~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~G~~~~~Kg~~~li~a~~~l~~~~~~~l~i~G~g~~~~~l~ 257 (394)
T 2jjm_A 179 KDIQTVYNFIDERVYFKRDMTQLKKEYGI-SESEKILIHISNFRKVKRVQDVVQAFAKIVTEVDAKLLLVGDGPEFCTIL 257 (394)
T ss_dssp SCEEECCCCCCTTTCCCCCCHHHHHHTTC-C---CEEEEECCCCGGGTHHHHHHHHHHHHHSSCCEEEEECCCTTHHHHH
T ss_pred ccEEEecCCccHHhcCCcchHHHHHHcCC-CCCCeEEEEeeccccccCHHHHHHHHHHHHhhCCCEEEEECCchHHHHHH
Confidence 35666664333221111111111111111 1223556667877532 22333333333333 355555543332211111
Q ss_pred hhhhhh--hCCCceEeeccCh-HhhhcccCcceEE----ecCCchhHHHHHHcCCCeeccccccchhHHHHHHHHhhcee
Q 012893 318 KGFLER--TKSYGKVVPWAPQ-LKILEHSSVCVFV----THCGWNSTIEGITGGVPMVCRPVFADQALNQRIIETAWGIG 390 (454)
Q Consensus 318 ~~~~~~--~~~nv~v~~~vp~-~~ll~~~~~~~~I----~HgG~gsv~eal~~GvP~i~~P~~~DQ~~nA~~v~~~~G~G 390 (454)
...+. ..+||.+.++... ..++..++ ++| .-|.-+++.||+++|+|+|+.+..+ ....++.. +.|
T Consensus 258 -~~~~~~~l~~~v~~~g~~~~~~~~~~~ad--v~v~ps~~e~~~~~~~EAma~G~PvI~~~~~~----~~e~v~~~-~~g 329 (394)
T 2jjm_A 258 -QLVKNLHIEDRVLFLGKQDNVAELLAMSD--LMLLLSEKESFGLVLLEAMACGVPCIGTRVGG----IPEVIQHG-DTG 329 (394)
T ss_dssp -HHHHTTTCGGGBCCCBSCSCTHHHHHTCS--EEEECCSCCSCCHHHHHHHHTTCCEEEECCTT----STTTCCBT-TTE
T ss_pred -HHHHHcCCCCeEEEeCchhhHHHHHHhCC--EEEeccccCCCchHHHHHHhcCCCEEEecCCC----hHHHhhcC-Cce
Confidence 11111 1367888887653 57887777 777 4456678999999999999876532 22334444 567
Q ss_pred ecCcCCCCCHHHHHHHHHHHhcCchH-HHHHHHHHHHH
Q 012893 391 VGVXGEKFTKDETVNALKQVLSSEEG-KRMRENVGALK 427 (454)
Q Consensus 391 ~~~~~~~~~~~~l~~av~~vl~~~~~-~~~~~~a~~l~ 427 (454)
..++.. +.+++.++|.++++|++. +.+.+++++..
T Consensus 330 ~~~~~~--d~~~la~~i~~l~~~~~~~~~~~~~~~~~~ 365 (394)
T 2jjm_A 330 YLCEVG--DTTGVADQAIQLLKDEELHRNMGERARESV 365 (394)
T ss_dssp EEECTT--CHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
T ss_pred EEeCCC--CHHHHHHHHHHHHcCHHHHHHHHHHHHHHH
Confidence 777654 789999999999998732 34555554443
No 36
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=99.14 E-value=1.7e-09 Score=103.56 Aligned_cols=125 Identities=15% Similarity=0.127 Sum_probs=84.8
Q ss_pred EEEeeCCCCCCCHHHHHHHHHHHHhcCCCEEEEEcCCcccccchhhhhhhCCCceEeeccChH---hhhcccCcceEEec
Q 012893 275 IYISFGSMITPPRAEVIALAEALEAIGFPFLWSFRGNAEEQLPKGFLERTKSYGKVVPWAPQL---KILEHSSVCVFVTH 351 (454)
Q Consensus 275 v~vs~Gs~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~~~~~~nv~v~~~vp~~---~ll~~~~~~~~I~H 351 (454)
+++..|+.. .......++++++..+.+++++..+.....+ ..+.+...+||.+.+++++. .++..++ ++|..
T Consensus 164 ~i~~vG~~~--~~Kg~~~li~a~~~~~~~l~i~G~g~~~~~l-~~~~~~~~~~v~~~g~~~~~~l~~~~~~ad--v~v~p 238 (342)
T 2iuy_A 164 FLLFMGRVS--PHKGALEAAAFAHACGRRLVLAGPAWEPEYF-DEITRRYGSTVEPIGEVGGERRLDLLASAH--AVLAM 238 (342)
T ss_dssp CEEEESCCC--GGGTHHHHHHHHHHHTCCEEEESCCCCHHHH-HHHHHHHTTTEEECCCCCHHHHHHHHHHCS--EEEEC
T ss_pred EEEEEeccc--cccCHHHHHHHHHhcCcEEEEEeCcccHHHH-HHHHHHhCCCEEEeccCCHHHHHHHHHhCC--EEEEC
Confidence 344567765 2334556666666668887776544321111 22333344899999999975 7888887 66632
Q ss_pred -------------CC-chhHHHHHHcCCCeeccccccchhHHHHHHHH--hhceeecCcCCCCCHHHHHHHHHHHhc
Q 012893 352 -------------CG-WNSTIEGITGGVPMVCRPVFADQALNQRIIET--AWGIGVGVXGEKFTKDETVNALKQVLS 412 (454)
Q Consensus 352 -------------gG-~gsv~eal~~GvP~i~~P~~~DQ~~nA~~v~~--~~G~G~~~~~~~~~~~~l~~av~~vl~ 412 (454)
-| -.++.||+++|+|+|+... ..+...++. - +.|..++. +.++++++|.++++
T Consensus 239 s~~~~~~~~~~~~E~~~~~~~EAma~G~PvI~s~~----~~~~e~~~~~~~-~~g~~~~~---d~~~l~~~i~~l~~ 307 (342)
T 2iuy_A 239 SQAVTGPWGGIWCEPGATVVSEAAVSGTPVVGTGN----GCLAEIVPSVGE-VVGYGTDF---APDEARRTLAGLPA 307 (342)
T ss_dssp CCCCCCTTCSCCCCCCCHHHHHHHHTTCCEEECCT----TTHHHHGGGGEE-ECCSSSCC---CHHHHHHHHHTSCC
T ss_pred CcccccccccccccCccHHHHHHHhcCCCEEEcCC----CChHHHhcccCC-CceEEcCC---CHHHHHHHHHHHHH
Confidence 33 3579999999999998765 346677777 6 67776664 88999999999886
No 37
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=99.05 E-value=4.4e-08 Score=94.57 Aligned_cols=161 Identities=14% Similarity=0.171 Sum_probs=100.2
Q ss_pred cEEEEeeCCCCCCCHHHHHHHHHHHHhc------CCCEEEEEcCCcccccchhhhhh--hCCCceEeeccCh-Hhhhccc
Q 012893 273 SVIYISFGSMITPPRAEVIALAEALEAI------GFPFLWSFRGNAEEQLPKGFLER--TKSYGKVVPWAPQ-LKILEHS 343 (454)
Q Consensus 273 ~~v~vs~Gs~~~~~~~~~~~~~~~~~~~------~~~~i~~~~~~~~~~l~~~~~~~--~~~nv~v~~~vp~-~~ll~~~ 343 (454)
..+++..|+.... .....+++++... +.+++++ |......+. .+.+. ..+||.+.++... ..++..+
T Consensus 196 ~~~i~~~G~~~~~--K~~~~li~a~~~l~~~~~~~~~l~i~-G~g~~~~~~-~~~~~~~~~~~v~~~g~~~~~~~~~~~a 271 (374)
T 2iw1_A 196 QNLLLQVGSDFGR--KGVDRSIEALASLPESLRHNTLLFVV-GQDKPRKFE-ALAEKLGVRSNVHFFSGRNDVSELMAAA 271 (374)
T ss_dssp CEEEEEECSCTTT--TTHHHHHHHHHTSCHHHHHTEEEEEE-SSSCCHHHH-HHHHHHTCGGGEEEESCCSCHHHHHHHC
T ss_pred CeEEEEeccchhh--cCHHHHHHHHHHhHhccCCceEEEEE-cCCCHHHHH-HHHHHcCCCCcEEECCCcccHHHHHHhc
Confidence 4667778877532 2334455555543 3444444 433221111 11111 2368888887654 5788888
Q ss_pred CcceEEe----cCCchhHHHHHHcCCCeeccccccchhHHHHHHHHhhceeecCcCCCCCHHHHHHHHHHHhcCchH-HH
Q 012893 344 SVCVFVT----HCGWNSTIEGITGGVPMVCRPVFADQALNQRIIETAWGIGVGVXGEKFTKDETVNALKQVLSSEEG-KR 418 (454)
Q Consensus 344 ~~~~~I~----HgG~gsv~eal~~GvP~i~~P~~~DQ~~nA~~v~~~~G~G~~~~~~~~~~~~l~~av~~vl~~~~~-~~ 418 (454)
+ ++|. -|.-+++.||+++|+|+|+.+. ..+...+++. +.|..++. .-+.+++.+++.++++|++. +.
T Consensus 272 d--~~v~ps~~e~~~~~~~Ea~a~G~Pvi~~~~----~~~~e~i~~~-~~g~~~~~-~~~~~~l~~~i~~l~~~~~~~~~ 343 (374)
T 2iw1_A 272 D--LLLHPAYQEAAGIVLLEAITAGLPVLTTAV----CGYAHYIADA-NCGTVIAE-PFSQEQLNEVLRKALTQSPLRMA 343 (374)
T ss_dssp S--EEEECCSCCSSCHHHHHHHHHTCCEEEETT----STTTHHHHHH-TCEEEECS-SCCHHHHHHHHHHHHHCHHHHHH
T ss_pred C--EEEeccccCCcccHHHHHHHCCCCEEEecC----CCchhhhccC-CceEEeCC-CCCHHHHHHHHHHHHcChHHHHH
Confidence 7 7776 4566789999999999998765 3456677888 89988862 13899999999999998732 45
Q ss_pred HHHHHHHHHHHHHHHHhhCCChHHHHHHHHHH
Q 012893 419 MRENVGALKKLAFKAVESDGSSTKNFKALVEV 450 (454)
Q Consensus 419 ~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~ 450 (454)
+.+++++..+.. .-.+....+.++++.
T Consensus 344 ~~~~~~~~~~~~-----~~~~~~~~~~~~l~~ 370 (374)
T 2iw1_A 344 WAENARHYADTQ-----DLYSLPEKAADIITG 370 (374)
T ss_dssp HHHHHHHHHHHS-----CCSCHHHHHHHHHHC
T ss_pred HHHHHHHHHHHh-----hHHHHHHHHHHHHHH
Confidence 555555554432 114444555555543
No 38
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=99.02 E-value=2.2e-07 Score=91.25 Aligned_cols=142 Identities=17% Similarity=0.051 Sum_probs=87.2
Q ss_pred EEEEeeCCCCCC-CHHHHHHHHHHHHh--cCCCEEEEEcCCcc----cccchhhhhh--hCCCceEeeccC------hHh
Q 012893 274 VIYISFGSMITP-PRAEVIALAEALEA--IGFPFLWSFRGNAE----EQLPKGFLER--TKSYGKVVPWAP------QLK 338 (454)
Q Consensus 274 ~v~vs~Gs~~~~-~~~~~~~~~~~~~~--~~~~~i~~~~~~~~----~~l~~~~~~~--~~~nv~v~~~vp------~~~ 338 (454)
.+++..|..... ..+.+...+..+.+ .+.+++++..+... ...-..+.+. ..++|.+.++++ ...
T Consensus 232 ~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~~~~~V~~~G~~~~~~~~~~~~ 311 (416)
T 2x6q_A 232 PIITQVSRFDPWKGIFDVIEIYRKVKEKIPGVQLLLVGVMAHDDPEGWIYFEKTLRKIGEDYDVKVLTNLIGVHAREVNA 311 (416)
T ss_dssp CEEEEECCCCTTSCHHHHHHHHHHHHHHCTTCEEEEEECCCTTCHHHHHHHHHHHHHHTTCTTEEEEEGGGTCCHHHHHH
T ss_pred cEEEEEeccccccCHHHHHHHHHHHHHhCCCeEEEEEecCcccchhHHHHHHHHHHHhCCCCcEEEecccCCCCHHHHHH
Confidence 455567776543 23333333343433 35676666554321 0000111122 236899988775 246
Q ss_pred hhcccCcceEEecC----CchhHHHHHHcCCCeeccccccchhHHHHHHHHhhceeecCcCCCCCHHHHHHHHHHHhcCc
Q 012893 339 ILEHSSVCVFVTHC----GWNSTIEGITGGVPMVCRPVFADQALNQRIIETAWGIGVGVXGEKFTKDETVNALKQVLSSE 414 (454)
Q Consensus 339 ll~~~~~~~~I~Hg----G~gsv~eal~~GvP~i~~P~~~DQ~~nA~~v~~~~G~G~~~~~~~~~~~~l~~av~~vl~~~ 414 (454)
++..++ ++|.-+ .-.++.||+++|+|+|+.+. ..+...++.. +.|..++ +.+++.++|.++++|+
T Consensus 312 ~~~~ad--~~v~ps~~E~~~~~~lEAma~G~PvI~~~~----~g~~e~i~~~-~~g~l~~----d~~~la~~i~~ll~~~ 380 (416)
T 2x6q_A 312 FQRASD--VILQMSIREGFGLTVTEAMWKGKPVIGRAV----GGIKFQIVDG-ETGFLVR----DANEAVEVVLYLLKHP 380 (416)
T ss_dssp HHHHCS--EEEECCSSCSSCHHHHHHHHTTCCEEEESC----HHHHHHCCBT-TTEEEES----SHHHHHHHHHHHHHCH
T ss_pred HHHhCC--EEEECCCcCCCccHHHHHHHcCCCEEEccC----CCChhheecC-CCeEEEC----CHHHHHHHHHHHHhCH
Confidence 777777 777655 45689999999999998664 3456666666 6787775 7899999999999987
Q ss_pred hH-HHHHHHHHHH
Q 012893 415 EG-KRMRENVGAL 426 (454)
Q Consensus 415 ~~-~~~~~~a~~l 426 (454)
+. ..+.+++++.
T Consensus 381 ~~~~~~~~~a~~~ 393 (416)
T 2x6q_A 381 EVSKEMGAKAKER 393 (416)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 32 3444444443
No 39
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=98.98 E-value=1.8e-09 Score=104.99 Aligned_cols=128 Identities=14% Similarity=0.129 Sum_probs=85.1
Q ss_pred CcEEEEeeCCCCCCC-HHHHHHHHHHHHhc----CCCEEEEEcCCcccccchhhhhh-----hCCCceEeeccC---hHh
Q 012893 272 ASVIYISFGSMITPP-RAEVIALAEALEAI----GFPFLWSFRGNAEEQLPKGFLER-----TKSYGKVVPWAP---QLK 338 (454)
Q Consensus 272 ~~~v~vs~Gs~~~~~-~~~~~~~~~~~~~~----~~~~i~~~~~~~~~~l~~~~~~~-----~~~nv~v~~~vp---~~~ 338 (454)
++.|+++.|...... ...+..+++++... +.++|+..++.. .+.+.+. ..+|+.+.+.++ ...
T Consensus 203 ~~~iLvt~hr~e~~~~~~~l~~ll~al~~l~~~~~~~vv~p~~p~~----~~~l~~~~~~~~~~~~v~l~~~lg~~~~~~ 278 (385)
T 4hwg_A 203 KQYFLISSHREENVDVKNNLKELLNSLQMLIKEYNFLIIFSTHPRT----KKRLEDLEGFKELGDKIRFLPAFSFTDYVK 278 (385)
T ss_dssp TSEEEEEECCC-----CHHHHHHHHHHHHHHHHHCCEEEEEECHHH----HHHHHTSGGGGGTGGGEEECCCCCHHHHHH
T ss_pred CCEEEEEeCCchhcCcHHHHHHHHHHHHHHHhcCCeEEEEECChHH----HHHHHHHHHHhcCCCCEEEEcCCCHHHHHH
Confidence 568888888754322 23455565655432 667777665321 1111111 125788876555 457
Q ss_pred hhcccCcceEEecCCchhHHHHHHcCCCeeccccccchhHHHHHHHHhhceeecCcCCCCCHHHHHHHHHHHhcCc
Q 012893 339 ILEHSSVCVFVTHCGWNSTIEGITGGVPMVCRPVFADQALNQRIIETAWGIGVGVXGEKFTKDETVNALKQVLSSE 414 (454)
Q Consensus 339 ll~~~~~~~~I~HgG~gsv~eal~~GvP~i~~P~~~DQ~~nA~~v~~~~G~G~~~~~~~~~~~~l~~av~~vl~~~ 414 (454)
++++++ ++|+-+|. .+.||.+.|+|+|+++...+.+. ..+. |.++.+. .+++.|.+++.++++|+
T Consensus 279 l~~~ad--lvvt~SGg-v~~EA~alG~Pvv~~~~~ter~e----~v~~-G~~~lv~---~d~~~i~~ai~~ll~d~ 343 (385)
T 4hwg_A 279 LQMNAF--CILSDSGT-ITEEASILNLPALNIREAHERPE----GMDA-GTLIMSG---FKAERVLQAVKTITEEH 343 (385)
T ss_dssp HHHHCS--EEEECCTT-HHHHHHHTTCCEEECSSSCSCTH----HHHH-TCCEECC---SSHHHHHHHHHHHHTTC
T ss_pred HHHhCc--EEEECCcc-HHHHHHHcCCCEEEcCCCccchh----hhhc-CceEEcC---CCHHHHHHHHHHHHhCh
Confidence 888887 99999886 46999999999999987654333 2567 8877765 37999999999999986
No 40
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=98.67 E-value=3.4e-06 Score=88.94 Aligned_cols=142 Identities=12% Similarity=0.064 Sum_probs=82.6
Q ss_pred cEEEEeeCCCCCCCHHHHHHHHHHHHh-----cCCCEEEEEcCCccc-------ccchhhh---hh--hCCCceEeecc-
Q 012893 273 SVIYISFGSMITPPRAEVIALAEALEA-----IGFPFLWSFRGNAEE-------QLPKGFL---ER--TKSYGKVVPWA- 334 (454)
Q Consensus 273 ~~v~vs~Gs~~~~~~~~~~~~~~~~~~-----~~~~~i~~~~~~~~~-------~l~~~~~---~~--~~~nv~v~~~v- 334 (454)
..+++..|..... ..+..+++++.. .+.+++++.++.... ...+.+. +. ..++|.+.+++
T Consensus 572 ~~vIl~vGRl~~~--KGid~LIeA~~~L~~~~~~v~LvIvG~g~~~~~~~~e~~~~~~~L~~li~~lgL~~~V~flG~~~ 649 (816)
T 3s28_A 572 KPILFTMARLDRV--KNLSGLVEWYGKNTRLRELANLVVVGGDRRKESKDNEEKAEMKKMYDLIEEYKLNGQFRWISSQM 649 (816)
T ss_dssp SCEEEEECCCCTT--TTHHHHHHHHHHCHHHHHHCEEEEECCCTTSCCCCHHHHHHHHHHHHHHHHTTCBBBEEEECCCC
T ss_pred CeEEEEEccCccc--CCHHHHHHHHHHHHhhCCCeEEEEEeCCCcccccchhhHHHHHHHHHHHHHcCCCCcEEEccCcc
Confidence 3566678887643 233344444433 245666665544100 0001111 11 23688888754
Q ss_pred ---ChHhhhc----ccCcceEEec----CCchhHHHHHHcCCCeeccccccchhHHHHHHHHhhceeecCcCCCCCHHHH
Q 012893 335 ---PQLKILE----HSSVCVFVTH----CGWNSTIEGITGGVPMVCRPVFADQALNQRIIETAWGIGVGVXGEKFTKDET 403 (454)
Q Consensus 335 ---p~~~ll~----~~~~~~~I~H----gG~gsv~eal~~GvP~i~~P~~~DQ~~nA~~v~~~~G~G~~~~~~~~~~~~l 403 (454)
|+..+.. .++ ++|.- |--.++.||+++|+|+|+. |.......++.- +.|..++.. +.+.+
T Consensus 650 ~~v~~~eL~~~~~~aaD--vfV~PS~~EgfglvllEAMA~G~PVIas----d~GG~~EiV~dg-~~Gllv~p~--D~e~L 720 (816)
T 3s28_A 650 DRVRNGELYRYICDTKG--AFVQPALYEAFGLTVVEAMTCGLPTFAT----CKGGPAEIIVHG-KSGFHIDPY--HGDQA 720 (816)
T ss_dssp CHHHHHHHHHHHHHTTC--EEEECCSCBSSCHHHHHHHHTTCCEEEE----SSBTHHHHCCBT-TTBEEECTT--SHHHH
T ss_pred ccCCHHHHHHHHHhcCe--EEEECCCccCccHHHHHHHHcCCCEEEe----CCCChHHHHccC-CcEEEeCCC--CHHHH
Confidence 4444443 344 77754 3345899999999999985 444455666666 678888764 78999
Q ss_pred HHHHHHHh----cCch-HHHHHHHHHH
Q 012893 404 VNALKQVL----SSEE-GKRMRENVGA 425 (454)
Q Consensus 404 ~~av~~vl----~~~~-~~~~~~~a~~ 425 (454)
+++|.+++ +|++ .+.+.+++++
T Consensus 721 A~aI~~lL~~Ll~d~~~~~~m~~~ar~ 747 (816)
T 3s28_A 721 ADTLADFFTKCKEDPSHWDEISKGGLQ 747 (816)
T ss_dssp HHHHHHHHHHHHHCTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhccCHHHHHHHHHHHHH
Confidence 99997776 7763 2444554444
No 41
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=98.62 E-value=0.00014 Score=74.35 Aligned_cols=94 Identities=13% Similarity=0.178 Sum_probs=66.8
Q ss_pred CCceEeeccCh---HhhhcccCcceEEe---cCCchhHHHHHHcCCCeecccccc-chhHHHHHHHHhhceeecCcCCCC
Q 012893 326 SYGKVVPWAPQ---LKILEHSSVCVFVT---HCGWNSTIEGITGGVPMVCRPVFA-DQALNQRIIETAWGIGVGVXGEKF 398 (454)
Q Consensus 326 ~nv~v~~~vp~---~~ll~~~~~~~~I~---HgG~gsv~eal~~GvP~i~~P~~~-DQ~~nA~~v~~~~G~G~~~~~~~~ 398 (454)
++|.+.+++|+ ..++..++ ++|. .|+-.++.||+++|+|+|+.|-.. --..-+..+... |+...+..
T Consensus 434 ~~v~~~g~~~~~~~~~~~~~ad--v~v~ps~~~~g~~~lEAma~G~Pvv~~~g~~~~s~~~~~~l~~~-g~~e~v~~--- 507 (568)
T 2vsy_A 434 QRLVFMPKLPHPQYLARYRHAD--LFLDTHPYNAHTTASDALWTGCPVLTTPGETFAARVAGSLNHHL-GLDEMNVA--- 507 (568)
T ss_dssp GGEEEECCCCHHHHHHHGGGCS--EEECCSSSCCSHHHHHHHHTTCCEEBCCCSSGGGSHHHHHHHHH-TCGGGBCS---
T ss_pred hHEEeeCCCCHHHHHHHHhcCC--EEeeCCCCCCcHHHHHHHhCCCCEEeccCCCchHHHHHHHHHHC-CChhhhcC---
Confidence 68899999984 36677777 7773 256678999999999999977431 112235666777 88766654
Q ss_pred CHHHHHHHHHHHhcCchH-HHHHHHHHH
Q 012893 399 TKDETVNALKQVLSSEEG-KRMRENVGA 425 (454)
Q Consensus 399 ~~~~l~~av~~vl~~~~~-~~~~~~a~~ 425 (454)
+.+.+.+++.++++|++. +.+++++++
T Consensus 508 ~~~~la~~i~~l~~~~~~~~~~~~~~~~ 535 (568)
T 2vsy_A 508 DDAAFVAKAVALASDPAALTALHARVDV 535 (568)
T ss_dssp SHHHHHHHHHHHHHCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 889999999999998732 344444443
No 42
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=98.61 E-value=2.7e-06 Score=85.29 Aligned_cols=130 Identities=10% Similarity=0.036 Sum_probs=78.1
Q ss_pred EEEEeeCCCCCCC-HHHHHHHHHHHHhcCCCEEEEEcCCc--ccccchhhhhhhCCCce-EeeccChH---hhhcccCcc
Q 012893 274 VIYISFGSMITPP-RAEVIALAEALEAIGFPFLWSFRGNA--EEQLPKGFLERTKSYGK-VVPWAPQL---KILEHSSVC 346 (454)
Q Consensus 274 ~v~vs~Gs~~~~~-~~~~~~~~~~~~~~~~~~i~~~~~~~--~~~l~~~~~~~~~~nv~-v~~~vp~~---~ll~~~~~~ 346 (454)
.+++..|+..... .+.+...+..+.+.+.+++++..+.. ...+ ..+.+...++|. +.++ +.. .++..++
T Consensus 292 ~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~l~ivG~g~~~~~~~l-~~~~~~~~~~v~~~~g~-~~~~~~~~~~~ad-- 367 (485)
T 1rzu_A 292 PLFCVISRLTWQKGIDLMAEAVDEIVSLGGRLVVLGAGDVALEGAL-LAAASRHHGRVGVAIGY-NEPLSHLMQAGCD-- 367 (485)
T ss_dssp CEEEEESCBSTTTTHHHHHTTHHHHHHTTCEEEEEECBCHHHHHHH-HHHHHHTTTTEEEEESC-CHHHHHHHHHHCS--
T ss_pred eEEEEEccCccccCHHHHHHHHHHHHhcCceEEEEeCCchHHHHHH-HHHHHhCCCcEEEecCC-CHHHHHHHHhcCC--
Confidence 4667788876432 33343444444445777776655431 1111 122222346887 5677 543 5787777
Q ss_pred eEEec----CCchhHHHHHHcCCCeeccccccchhHHHHHHHH---------hhceeecCcCCCCCHHHHHHHHHHHh--
Q 012893 347 VFVTH----CGWNSTIEGITGGVPMVCRPVFADQALNQRIIET---------AWGIGVGVXGEKFTKDETVNALKQVL-- 411 (454)
Q Consensus 347 ~~I~H----gG~gsv~eal~~GvP~i~~P~~~DQ~~nA~~v~~---------~~G~G~~~~~~~~~~~~l~~av~~vl-- 411 (454)
++|.- |--.++.||+++|+|+|+.... .....++. . +.|..++.. +.++++++|.+++
T Consensus 368 v~v~pS~~E~~~~~~lEAma~G~PvI~s~~g----g~~e~v~~~~~~~~~~~~-~~G~l~~~~--d~~~la~~i~~ll~~ 440 (485)
T 1rzu_A 368 AIIIPSRFEPCGLTQLYALRYGCIPVVARTG----GLADTVIDANHAALASKA-ATGVQFSPV--TLDGLKQAIRRTVRY 440 (485)
T ss_dssp EEEECCSCCSSCSHHHHHHHHTCEEEEESSH----HHHHHCCBCCHHHHHTTC-CCBEEESSC--SHHHHHHHHHHHHHH
T ss_pred EEEECcccCCCCHHHHHHHHCCCCEEEeCCC----ChhheecccccccccccC-CcceEeCCC--CHHHHHHHHHHHHHH
Confidence 77743 3345899999999999987542 22332221 1 256666653 7899999999999
Q ss_pred -cCc
Q 012893 412 -SSE 414 (454)
Q Consensus 412 -~~~ 414 (454)
+|+
T Consensus 441 ~~~~ 444 (485)
T 1rzu_A 441 YHDP 444 (485)
T ss_dssp HTCH
T ss_pred hCCH
Confidence 675
No 43
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8
Probab=98.53 E-value=4.6e-07 Score=77.82 Aligned_cols=140 Identities=9% Similarity=0.115 Sum_probs=92.3
Q ss_pred EEEEeeCCCCCCCHHHHHHHHHHHHhc-CCCEEEEEcCCcccccchhhh---hhhCCCceEeeccCh---HhhhcccCcc
Q 012893 274 VIYISFGSMITPPRAEVIALAEALEAI-GFPFLWSFRGNAEEQLPKGFL---ERTKSYGKVVPWAPQ---LKILEHSSVC 346 (454)
Q Consensus 274 ~v~vs~Gs~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~l~~~~~---~~~~~nv~v~~~vp~---~~ll~~~~~~ 346 (454)
.+++..|+... ...+..+++++... +.+++++..+.....+.+... ....+||.+.+++++ ..++..++
T Consensus 24 ~~i~~~G~~~~--~Kg~~~li~a~~~l~~~~l~i~G~~~~~~~l~~~~~~~~~~l~~~v~~~g~~~~~e~~~~~~~ad-- 99 (177)
T 2f9f_A 24 DFWLSVNRIYP--EKRIELQLEVFKKLQDEKLYIVGWFSKGDHAERYARKIMKIAPDNVKFLGSVSEEELIDLYSRCK-- 99 (177)
T ss_dssp SCEEEECCSSG--GGTHHHHHHHHHHCTTSCEEEEBCCCTTSTHHHHHHHHHHHSCTTEEEEESCCHHHHHHHHHHCS--
T ss_pred CEEEEEecccc--ccCHHHHHHHHHhCCCcEEEEEecCccHHHHHHHHHhhhcccCCcEEEeCCCCHHHHHHHHHhCC--
Confidence 34556777753 33455666777665 667776655443222222111 123469999999997 57888887
Q ss_pred eEEe---cCCch-hHHHHHHcCCCeeccccccchhHHHHHHHHhhceeecCcCCCCCHHHHHHHHHHHhcCchHHHHHHH
Q 012893 347 VFVT---HCGWN-STIEGITGGVPMVCRPVFADQALNQRIIETAWGIGVGVXGEKFTKDETVNALKQVLSSEEGKRMREN 422 (454)
Q Consensus 347 ~~I~---HgG~g-sv~eal~~GvP~i~~P~~~DQ~~nA~~v~~~~G~G~~~~~~~~~~~~l~~av~~vl~~~~~~~~~~~ 422 (454)
++|. +.|+| ++.||+++|+|+|+... ..+...++.. +.|..+ . -+.+++.++|.++++|++ .++++
T Consensus 100 i~v~ps~~e~~~~~~~Eama~G~PvI~~~~----~~~~e~i~~~-~~g~~~-~--~d~~~l~~~i~~l~~~~~--~~~~~ 169 (177)
T 2f9f_A 100 GLLCTAKDEDFGLTPIEAMASGKPVIAVNE----GGFKETVINE-KTGYLV-N--ADVNEIIDAMKKVSKNPD--KFKKD 169 (177)
T ss_dssp EEEECCSSCCSCHHHHHHHHTTCCEEEESS----HHHHHHCCBT-TTEEEE-C--SCHHHHHHHHHHHHHCTT--TTHHH
T ss_pred EEEeCCCcCCCChHHHHHHHcCCcEEEeCC----CCHHHHhcCC-CccEEe-C--CCHHHHHHHHHHHHhCHH--HHHHH
Confidence 7776 34544 99999999999998653 4566666666 678777 3 489999999999998872 22444
Q ss_pred HHHHH
Q 012893 423 VGALK 427 (454)
Q Consensus 423 a~~l~ 427 (454)
+++.+
T Consensus 170 ~~~~a 174 (177)
T 2f9f_A 170 CFRRA 174 (177)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 44443
No 44
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=98.42 E-value=2.4e-05 Score=78.33 Aligned_cols=133 Identities=10% Similarity=0.048 Sum_probs=76.8
Q ss_pred cEEEEeeCCCCCC-CHHHHHHHHHHHHhcCCCEEEEEcCCc--ccccchhhhhhhCCCce-EeeccCh--HhhhcccCcc
Q 012893 273 SVIYISFGSMITP-PRAEVIALAEALEAIGFPFLWSFRGNA--EEQLPKGFLERTKSYGK-VVPWAPQ--LKILEHSSVC 346 (454)
Q Consensus 273 ~~v~vs~Gs~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~~~--~~~l~~~~~~~~~~nv~-v~~~vp~--~~ll~~~~~~ 346 (454)
..+++..|..... ..+.+...+..+.+.+.+++++..+.. ...+ ..+.+...++|. +.++... ..++..++
T Consensus 292 ~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~l~ivG~g~~~~~~~l-~~~~~~~~~~v~~~~g~~~~~~~~~~~~ad-- 368 (485)
T 2qzs_A 292 VPLFAVVSRLTSQKGLDLVLEALPGLLEQGGQLALLGAGDPVLQEGF-LAAAAEYPGQVGVQIGYHEAFSHRIMGGAD-- 368 (485)
T ss_dssp SCEEEEEEEESGGGCHHHHHHHHHHHHHTTCEEEEEEEECHHHHHHH-HHHHHHSTTTEEEEESCCHHHHHHHHHHCS--
T ss_pred CeEEEEeccCccccCHHHHHHHHHHHhhCCcEEEEEeCCchHHHHHH-HHHHHhCCCcEEEeCCCCHHHHHHHHHhCC--
Confidence 3556667776532 233333444444444677766655431 1111 112222346786 6677332 36787777
Q ss_pred eEEecC---C-chhHHHHHHcCCCeeccccccchhHHHHHHHHhh--------ceeecCcCCCCCHHHHHHHHHHHh---
Q 012893 347 VFVTHC---G-WNSTIEGITGGVPMVCRPVFADQALNQRIIETAW--------GIGVGVXGEKFTKDETVNALKQVL--- 411 (454)
Q Consensus 347 ~~I~Hg---G-~gsv~eal~~GvP~i~~P~~~DQ~~nA~~v~~~~--------G~G~~~~~~~~~~~~l~~av~~vl--- 411 (454)
++|.-. | -.++.||+++|+|+|+.... .....+..-. +.|..++.. +.++++++|.+++
T Consensus 369 v~v~pS~~E~~g~~~lEAma~G~PvI~s~~g----g~~e~v~~~~~~~~~~~~~~G~l~~~~--d~~~la~~i~~ll~~~ 442 (485)
T 2qzs_A 369 VILVPSRFEPCGLTQLYGLKYGTLPLVRRTG----GLADTVSDCSLENLADGVASGFVFEDS--NAWSLLRAIRRAFVLW 442 (485)
T ss_dssp EEEECCSCCSSCSHHHHHHHHTCEEEEESSH----HHHHHCCBCCHHHHHTTCCCBEEECSS--SHHHHHHHHHHHHHHH
T ss_pred EEEECCccCCCcHHHHHHHHCCCCEEECCCC----CccceeccCccccccccccceEEECCC--CHHHHHHHHHHHHHHc
Confidence 777443 3 45788999999999987542 2333332210 256666654 7899999999999
Q ss_pred cCc
Q 012893 412 SSE 414 (454)
Q Consensus 412 ~~~ 414 (454)
+|+
T Consensus 443 ~~~ 445 (485)
T 2qzs_A 443 SRP 445 (485)
T ss_dssp TSH
T ss_pred CCH
Confidence 675
No 45
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=98.21 E-value=8.9e-05 Score=72.44 Aligned_cols=114 Identities=12% Similarity=0.024 Sum_probs=75.4
Q ss_pred EEEEeeCCCCCCCHHHHHHHHHHHHh--cCCCEEEEEcCCcccccchhhhhhhCCCceEeeccChH---hhhcccCcceE
Q 012893 274 VIYISFGSMITPPRAEVIALAEALEA--IGFPFLWSFRGNAEEQLPKGFLERTKSYGKVVPWAPQL---KILEHSSVCVF 348 (454)
Q Consensus 274 ~v~vs~Gs~~~~~~~~~~~~~~~~~~--~~~~~i~~~~~~~~~~l~~~~~~~~~~nv~v~~~vp~~---~ll~~~~~~~~ 348 (454)
.+++..|+... .+.. +..+.+ .+.+++++ |......+ ...+||.+.+++|+. .++..++ ++
T Consensus 223 ~~i~~vGrl~~-~Kg~----~~~l~~~~~~~~l~iv-G~g~~~~~------~l~~~V~f~G~~~~~~l~~~~~~ad--v~ 288 (406)
T 2hy7_A 223 IHAVAVGSMLF-DPEF----FVVASKAFPQVTFHVI-GSGMGRHP------GYGDNVIVYGEMKHAQTIGYIKHAR--FG 288 (406)
T ss_dssp EEEEEECCTTB-CHHH----HHHHHHHCTTEEEEEE-SCSSCCCT------TCCTTEEEECCCCHHHHHHHHHTCS--EE
T ss_pred cEEEEEecccc-ccCH----HHHHHHhCCCeEEEEE-eCchHHhc------CCCCCEEEcCCCCHHHHHHHHHhcC--EE
Confidence 56667888764 3444 333332 34555555 43221111 134789999999864 5677777 77
Q ss_pred Ee---cCCc-hhHHHHH-------HcCCCeeccccccchhHHHHHHHHhhceeec-CcCCCCCHHHHHHHHHHHhcCc
Q 012893 349 VT---HCGW-NSTIEGI-------TGGVPMVCRPVFADQALNQRIIETAWGIGVG-VXGEKFTKDETVNALKQVLSSE 414 (454)
Q Consensus 349 I~---HgG~-gsv~eal-------~~GvP~i~~P~~~DQ~~nA~~v~~~~G~G~~-~~~~~~~~~~l~~av~~vl~~~ 414 (454)
|. ..|. +++.||+ ++|+|+|+... +... ..|.. ++.+ +.+.++++|.++++|+
T Consensus 289 v~ps~~E~~~~~~lEAm~Kl~eYla~G~PVIas~~----------v~~~-~~G~l~v~~~--d~~~la~ai~~ll~~~ 353 (406)
T 2hy7_A 289 IAPYASEQVPVYLADSSMKLLQYDFFGLPAVCPNA----------VVGP-YKSRFGYTPG--NADSVIAAITQALEAP 353 (406)
T ss_dssp ECCBSCSCCCTTHHHHCHHHHHHHHHTCCEEEEGG----------GTCS-CSSEEEECTT--CHHHHHHHHHHHHHCC
T ss_pred EECCCcccCchHHHHHHHHHHHHhhCCCcEEEehh----------cccC-cceEEEeCCC--CHHHHHHHHHHHHhCc
Confidence 64 3344 4688999 99999998754 4444 56776 6654 7999999999999987
No 46
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=97.86 E-value=9.8e-05 Score=62.03 Aligned_cols=142 Identities=12% Similarity=0.153 Sum_probs=81.0
Q ss_pred cEEEEeeCCCCCCCHHHHHHHHHHHHhc----CCCEEEEEcCCcccccchhhhhhhCCCceEeeccChH---hhhcccCc
Q 012893 273 SVIYISFGSMITPPRAEVIALAEALEAI----GFPFLWSFRGNAEEQLPKGFLERTKSYGKVVPWAPQL---KILEHSSV 345 (454)
Q Consensus 273 ~~v~vs~Gs~~~~~~~~~~~~~~~~~~~----~~~~i~~~~~~~~~~l~~~~~~~~~~nv~v~~~vp~~---~ll~~~~~ 345 (454)
+++++..|+.... .....+++++... +.+++++..+.....+ ....+...-++.+ +++|+. .++..++
T Consensus 2 ~~~i~~~G~~~~~--Kg~~~li~a~~~l~~~~~~~l~i~G~g~~~~~~-~~~~~~~~~~v~~-g~~~~~~~~~~~~~ad- 76 (166)
T 3qhp_A 2 PFKIAMVGRYSNE--KNQSVLIKAVALSKYKQDIVLLLKGKGPDEKKI-KLLAQKLGVKAEF-GFVNSNELLEILKTCT- 76 (166)
T ss_dssp CEEEEEESCCSTT--TTHHHHHHHHHTCTTGGGEEEEEECCSTTHHHH-HHHHHHHTCEEEC-CCCCHHHHHHHHTTCS-
T ss_pred ceEEEEEeccchh--cCHHHHHHHHHHhccCCCeEEEEEeCCccHHHH-HHHHHHcCCeEEE-eecCHHHHHHHHHhCC-
Confidence 4677788888542 3344555555543 3444444332221111 1122223337777 999853 6777777
Q ss_pred ceEEec----CCchhHHHHHHcCC-CeeccccccchhHHHHHHHHhhceeecCcCCCCCHHHHHHHHHHHhcCchH-HHH
Q 012893 346 CVFVTH----CGWNSTIEGITGGV-PMVCRPVFADQALNQRIIETAWGIGVGVXGEKFTKDETVNALKQVLSSEEG-KRM 419 (454)
Q Consensus 346 ~~~I~H----gG~gsv~eal~~Gv-P~i~~P~~~DQ~~nA~~v~~~~G~G~~~~~~~~~~~~l~~av~~vl~~~~~-~~~ 419 (454)
++|.- |.-.++.||+++|+ |+|+....+. ....+... +. .+.. -+.+++.+++.++++|++. +.+
T Consensus 77 -v~v~ps~~e~~~~~~~Eama~G~vPvi~~~~~~~---~~~~~~~~-~~--~~~~--~~~~~l~~~i~~l~~~~~~~~~~ 147 (166)
T 3qhp_A 77 -LYVHAANVESEAIACLEAISVGIVPVIANSPLSA---TRQFALDE-RS--LFEP--NNAKDLSAKIDWWLENKLERERM 147 (166)
T ss_dssp -EEEECCCSCCCCHHHHHHHHTTCCEEEECCTTCG---GGGGCSSG-GG--EECT--TCHHHHHHHHHHHHHCHHHHHHH
T ss_pred -EEEECCcccCccHHHHHHHhcCCCcEEeeCCCCc---hhhhccCC-ce--EEcC--CCHHHHHHHHHHHHhCHHHHHHH
Confidence 77763 33459999999996 9998332111 11111222 32 2232 3899999999999998732 456
Q ss_pred HHHHHHHHH
Q 012893 420 RENVGALKK 428 (454)
Q Consensus 420 ~~~a~~l~~ 428 (454)
.+++++..+
T Consensus 148 ~~~~~~~~~ 156 (166)
T 3qhp_A 148 QNEYAKSAL 156 (166)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 666665443
No 47
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8
Probab=97.81 E-value=0.00031 Score=60.89 Aligned_cols=141 Identities=18% Similarity=0.172 Sum_probs=86.4
Q ss_pred EEEeeCCCC-CC-CHHHHHHHHHHHH--h--cCCCEEEEEcCC--cccccchhhhhhhCCCceE-eeccCh---Hhhhcc
Q 012893 275 IYISFGSMI-TP-PRAEVIALAEALE--A--IGFPFLWSFRGN--AEEQLPKGFLERTKSYGKV-VPWAPQ---LKILEH 342 (454)
Q Consensus 275 v~vs~Gs~~-~~-~~~~~~~~~~~~~--~--~~~~~i~~~~~~--~~~~l~~~~~~~~~~nv~v-~~~vp~---~~ll~~ 342 (454)
+++..|+.. .. ....+...+..+. + .+.+++++..+. ....+. .+.+... +|.+ .+++++ ..++..
T Consensus 38 ~i~~~G~~~~~~K~~~~li~a~~~l~~~~~~~~~~l~i~G~~~~~~~~~l~-~~~~~~~-~v~~~~g~~~~~~~~~~~~~ 115 (200)
T 2bfw_A 38 TFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFIIIGKGDPELEGWAR-SLEEKHG-NVKVITEMLSREFVRELYGS 115 (200)
T ss_dssp EEEEESCBCSSSSCHHHHHHHHHHHTTSGGGGGEEEEEECCBCHHHHHHHH-HHHHHCT-TEEEECSCCCHHHHHHHHTT
T ss_pred EEEEeeccccccCCHHHHHHHHHHHHhhccCCCeEEEEECCCChHHHHHHH-HHHHhcC-CEEEEeccCCHHHHHHHHHH
Confidence 566778776 33 3344444444443 2 244555553332 111111 1112222 8999 999984 477777
Q ss_pred cCcceEEecC---C-chhHHHHHHcCCCeeccccccchhHHHHHHHHhhceeecCcCCCCCHHHHHHHHHHHhc-CchH-
Q 012893 343 SSVCVFVTHC---G-WNSTIEGITGGVPMVCRPVFADQALNQRIIETAWGIGVGVXGEKFTKDETVNALKQVLS-SEEG- 416 (454)
Q Consensus 343 ~~~~~~I~Hg---G-~gsv~eal~~GvP~i~~P~~~DQ~~nA~~v~~~~G~G~~~~~~~~~~~~l~~av~~vl~-~~~~- 416 (454)
++ ++|+.. | -.++.||+++|+|+|+... ......+ .. +.|..++.. +.+.+.++|.++++ |++.
T Consensus 116 ad--~~l~ps~~e~~~~~~~Ea~a~G~PvI~~~~----~~~~e~~-~~-~~g~~~~~~--~~~~l~~~i~~l~~~~~~~~ 185 (200)
T 2bfw_A 116 VD--FVIIPSYFEPFGLVALEAMCLGAIPIASAV----GGLRDII-TN-ETGILVKAG--DPGELANAILKALELSRSDL 185 (200)
T ss_dssp CS--EEEECCSCCSSCHHHHHHHHTTCEEEEESC----HHHHHHC-CT-TTCEEECTT--CHHHHHHHHHHHHHCCHHHH
T ss_pred CC--EEEECCCCCCccHHHHHHHHCCCCEEEeCC----CChHHHc-CC-CceEEecCC--CHHHHHHHHHHHHhcCHHHH
Confidence 77 777543 2 4688999999999988754 3455555 55 677777654 79999999999999 8732
Q ss_pred HHHHHHHHHHH
Q 012893 417 KRMRENVGALK 427 (454)
Q Consensus 417 ~~~~~~a~~l~ 427 (454)
+.+.+++++..
T Consensus 186 ~~~~~~a~~~~ 196 (200)
T 2bfw_A 186 SKFRENCKKRA 196 (200)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 45555555543
No 48
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=97.72 E-value=0.0017 Score=61.86 Aligned_cols=106 Identities=8% Similarity=-0.023 Sum_probs=70.3
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHhhhcC--CCcEEEEEEeCCCcCccccccccccCCCCee-EEeCCCCCCCCCCC
Q 012893 8 TQRRHVAVLAFPFGTHAAPLLDLVRRLSEAAL--EEEVTFSFFSTAQSNGSLFMEKDELRDCKIV-PYNVESGLPEGFRF 84 (454)
Q Consensus 8 ~~~~~il~~~~~~~GH~~p~l~la~~L~~~~~--G~~h~V~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~~ 84 (454)
-..+|||++-..+.|++.-+.++.++| +++ + .+|++++.+.+.+.++.. ..++ ++.++.
T Consensus 6 l~~~~iLvi~~~~lGD~i~~~P~l~~L--~~~~P~--a~I~~l~~~~~~~l~~~~------p~vd~vi~~~~-------- 67 (349)
T 3tov_A 6 LDYKRIVVTFLMHLGDVILTTPFLEVL--RKAAPH--SHITYVIDEKLQQVMEYN------PNIDELIVVDK-------- 67 (349)
T ss_dssp CTTCEEEEECCCCHHHHHTTHHHHHHH--HHHCTT--SEEEEEEEGGGGGGTSSC------TTCSEEEEECC--------
T ss_pred CCCCEEEEEecCcccHHHHHHHHHHHH--HHHCCC--CEEEEEECcchhHHHhcC------CCccEEEEeCc--------
Confidence 446799999999999999999999999 654 8 999999998887766544 2454 455431
Q ss_pred CCCCcchHHHHHHhchHHHHHHHHHHHHhcCCCc-cEEEEcCchhhHHHHHHHcCCCeEE
Q 012893 85 TGNPREPVEHFLKATPGNFVRALEKAVAKTGLEI-SCLITDAFLWFAAEMAEEMRVPWIA 143 (454)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-D~vi~d~~~~~~~~~A~~lgiP~v~ 143 (454)
......+ ..+...+.++.+ .++ |++|.=....-...++...|+|...
T Consensus 68 ----~~~~~~~-----~~~~~l~~~Lr~---~~y~D~vidl~~~~rs~~l~~~~~a~~ri 115 (349)
T 3tov_A 68 ----KGRHNSI-----SGLNEVAREINA---KGKTDIVINLHPNERTSYLAWKIHAPITT 115 (349)
T ss_dssp ----SSHHHHH-----HHHHHHHHHHHH---HCCCCEEEECCCSHHHHHHHHHHCCSEEE
T ss_pred ----ccccccH-----HHHHHHHHHHhh---CCCCeEEEECCCChHHHHHHHHhCCCeEE
Confidence 0111111 111222232222 288 9998654455556788899999765
No 49
>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A*
Probab=97.65 E-value=0.00036 Score=67.28 Aligned_cols=98 Identities=17% Similarity=0.218 Sum_probs=73.3
Q ss_pred CceEeeccCh-HhhhcccCcceEEec-----CCchhHHHHHHcCCCeeccccccchhHHHHHHHHhhceeecCcCCCCCH
Q 012893 327 YGKVVPWAPQ-LKILEHSSVCVFVTH-----CGWNSTIEGITGGVPMVCRPVFADQALNQRIIETAWGIGVGVXGEKFTK 400 (454)
Q Consensus 327 nv~v~~~vp~-~~ll~~~~~~~~I~H-----gG~gsv~eal~~GvP~i~~P~~~DQ~~nA~~v~~~~G~G~~~~~~~~~~ 400 (454)
++.+.++... ..++..++ +++.- +|-.++.||+++|+|+|+-|..++.......+.+. |.++... +.
T Consensus 261 ~v~~~~~~~dl~~~y~~aD--v~vl~ss~~e~gg~~~lEAmA~G~PVI~~~~~~~~~e~~~~~~~~-G~l~~~~----d~ 333 (374)
T 2xci_A 261 DVILVDRFGILKELYPVGK--IAIVGGTFVNIGGHNLLEPTCWGIPVIYGPYTHKVNDLKEFLEKE-GAGFEVK----NE 333 (374)
T ss_dssp SEEECCSSSCHHHHGGGEE--EEEECSSSSSSCCCCCHHHHTTTCCEEECSCCTTSHHHHHHHHHT-TCEEECC----SH
T ss_pred cEEEECCHHHHHHHHHhCC--EEEECCcccCCCCcCHHHHHHhCCCEEECCCccChHHHHHHHHHC-CCEEEeC----CH
Confidence 4666665543 56777766 75542 23478999999999999878777777777776677 8887763 67
Q ss_pred HHHHHHHHHHhcCchH-HHHHHHHHHHHHHHHH
Q 012893 401 DETVNALKQVLSSEEG-KRMRENVGALKKLAFK 432 (454)
Q Consensus 401 ~~l~~av~~vl~~~~~-~~~~~~a~~l~~~~~~ 432 (454)
++|++++.++++| +. +.|.+++++..+.-..
T Consensus 334 ~~La~ai~~ll~d-~~r~~mg~~ar~~~~~~~g 365 (374)
T 2xci_A 334 TELVTKLTELLSV-KKEIKVEEKSREIKGCYLE 365 (374)
T ss_dssp HHHHHHHHHHHHS-CCCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhH-HHHHHHHHHHHHHHHhccc
Confidence 9999999999988 53 6788888887766444
No 50
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=97.59 E-value=0.0021 Score=67.30 Aligned_cols=138 Identities=14% Similarity=0.164 Sum_probs=93.1
Q ss_pred CCcEEEEeeCCCCCCCHHHHHHHHHHHHhcCCCEEEEEcCCccc--ccchhhhhh--hCCCceEeeccChH---hhhccc
Q 012893 271 NASVIYISFGSMITPPRAEVIALAEALEAIGFPFLWSFRGNAEE--QLPKGFLER--TKSYGKVVPWAPQL---KILEHS 343 (454)
Q Consensus 271 ~~~~v~vs~Gs~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~l~~~~~~~--~~~nv~v~~~vp~~---~ll~~~ 343 (454)
+..+||++|.+.....+..+..-.+.+++.+--.+|........ .+...+.+. .++++.+.+..|.. ..+..+
T Consensus 521 ~~~v~f~~fN~~~Ki~p~~~~~W~~IL~~vP~S~L~Ll~~~~~~~~~l~~~~~~~gi~~~r~~f~~~~~~~~~l~~~~~~ 600 (723)
T 4gyw_A 521 EDAIVYCNFNQLYKIDPSTLQMWANILKRVPNSVLWLLRFPAVGEPNIQQYAQNMGLPQNRIIFSPVAPKEEHVRRGQLA 600 (723)
T ss_dssp TTSEEEECCSCGGGCCHHHHHHHHHHHHHCSSEEEEEEETTGGGHHHHHHHHHHTTCCGGGEEEEECCCHHHHHHHGGGC
T ss_pred CCCEEEEeCCccccCCHHHHHHHHHHHHhCCCCeEEEEeCcHHHHHHHHHHHHhcCCCcCeEEECCCCCHHHHHHHhCCC
Confidence 34699999999999999999999999998777777776654321 122222111 13577778888854 344444
Q ss_pred CcceEEe---cCCchhHHHHHHcCCCeecccc-ccchhHHHHHHHHhhceeecCcCCCCCHHHHHHHHHHHhcCc
Q 012893 344 SVCVFVT---HCGWNSTIEGITGGVPMVCRPV-FADQALNQRIIETAWGIGVGVXGEKFTKDETVNALKQVLSSE 414 (454)
Q Consensus 344 ~~~~~I~---HgG~gsv~eal~~GvP~i~~P~-~~DQ~~nA~~v~~~~G~G~~~~~~~~~~~~l~~av~~vl~~~ 414 (454)
|+++- .+|.+|++|||++|||+|.+|- ..=...-+..+..+ |+.-.+-. +.++-.+.-.++-.|+
T Consensus 601 --Di~LDt~p~~g~tT~~eal~~GvPvvt~~g~~~~sR~~~s~l~~~-gl~e~ia~---~~~~Y~~~a~~la~d~ 669 (723)
T 4gyw_A 601 --DVCLDTPLCNGHTTGMDVLWAGTPMVTMPGETLASRVAASQLTCL-GCLELIAK---NRQEYEDIAVKLGTDL 669 (723)
T ss_dssp --SEEECCSSSCCSHHHHHHHHTTCCEEBCCCSSGGGTHHHHHHHHH-TCGGGBCS---SHHHHHHHHHHHHHCH
T ss_pred --eEEeCCCCcCCHHHHHHHHHcCCCEEEccCCCccHhHHHHHHHHc-CCcccccC---CHHHHHHHHHHHhcCH
Confidence 48876 8999999999999999999983 22334455666666 87765543 4554444444566665
No 51
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=97.58 E-value=0.00087 Score=65.19 Aligned_cols=132 Identities=13% Similarity=0.065 Sum_probs=76.9
Q ss_pred cEEEEeeCCCCCC-CHHHHHHHHHHHH-h-cCCCEEEEEcCCccc--ccchhhhh---h--hCCC-------ceEeeccC
Q 012893 273 SVIYISFGSMITP-PRAEVIALAEALE-A-IGFPFLWSFRGNAEE--QLPKGFLE---R--TKSY-------GKVVPWAP 335 (454)
Q Consensus 273 ~~v~vs~Gs~~~~-~~~~~~~~~~~~~-~-~~~~~i~~~~~~~~~--~l~~~~~~---~--~~~n-------v~v~~~vp 335 (454)
..+++..|..... ..+.+...+..+. + .+.+++++..+.... .+.+.+.+ . ..++ +.+.+++|
T Consensus 184 ~~~il~vGr~~~~Kg~~~li~a~~~l~~~~~~~~l~ivG~g~~~~~~~l~~~~~~~~~~~~l~~~v~~l~~vv~~~g~~~ 263 (413)
T 3oy2_A 184 DVLFLNMNRNTARKRLDIYVLAAARFISKYPDAKVRFLCNSHHESKFDLHSIALRELVASGVDNVFTHLNKIMINRTVLT 263 (413)
T ss_dssp SEEEECCSCSSGGGTHHHHHHHHHHHHHHCTTCCEEEEEECCTTCSCCHHHHHHHHHHHHTCSCHHHHHTTEEEECSCCC
T ss_pred ceEEEEcCCCchhcCcHHHHHHHHHHHHhCCCcEEEEEeCCcccchhhHHHHHHHHHHHcCcccccccccceeeccCcCC
Confidence 4677788886432 2233333333332 2 467777776554321 01122211 1 2233 55569998
Q ss_pred h---HhhhcccCcceEEec----CCchhHHHHHHcCCCeeccccccchhHHHHHHHHhhce---------------ee--
Q 012893 336 Q---LKILEHSSVCVFVTH----CGWNSTIEGITGGVPMVCRPVFADQALNQRIIETAWGI---------------GV-- 391 (454)
Q Consensus 336 ~---~~ll~~~~~~~~I~H----gG~gsv~eal~~GvP~i~~P~~~DQ~~nA~~v~~~~G~---------------G~-- 391 (454)
+ ..++..++ ++|.- |.-.++.||+++|+|+|+... ......+..- .. |.
T Consensus 264 ~~~~~~~~~~ad--v~v~pS~~E~~~~~~lEAma~G~PvI~s~~----~g~~e~v~~~-~~~~i~~~~~~~~~~~~G~~g 336 (413)
T 3oy2_A 264 DERVDMMYNACD--VIVNCSSGEGFGLCSAEGAVLGKPLIISAV----GGADDYFSGD-CVYKIKPSAWISVDDRDGIGG 336 (413)
T ss_dssp HHHHHHHHHHCS--EEEECCSCCSSCHHHHHHHTTTCCEEEECC----HHHHHHSCTT-TSEEECCCEEEECTTTCSSCC
T ss_pred HHHHHHHHHhCC--EEEeCCCcCCCCcHHHHHHHcCCCEEEcCC----CChHHHHccC-cccccccccccccccccCcce
Confidence 4 46787777 77742 233489999999999998643 3344444333 22 55
Q ss_pred cCcCCCCCHHHHHHHHHHHhcCc
Q 012893 392 GVXGEKFTKDETVNALKQVLSSE 414 (454)
Q Consensus 392 ~~~~~~~~~~~l~~av~~vl~~~ 414 (454)
.++.. +.++++++| ++++|+
T Consensus 337 l~~~~--d~~~la~~i-~l~~~~ 356 (413)
T 3oy2_A 337 IEGII--DVDDLVEAF-TFFKDE 356 (413)
T ss_dssp EEEEC--CHHHHHHHH-HHTTSH
T ss_pred eeCCC--CHHHHHHHH-HHhcCH
Confidence 45443 899999999 999987
No 52
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=97.51 E-value=0.0043 Score=58.83 Aligned_cols=96 Identities=13% Similarity=0.115 Sum_probs=60.0
Q ss_pred CCcEEEEeeCC-CC---CCCHHHHHHHHHHHHhcCCCEEEEEcCCcccccchhhhhhhC----CCce-EeeccC---hHh
Q 012893 271 NASVIYISFGS-MI---TPPRAEVIALAEALEAIGFPFLWSFRGNAEEQLPKGFLERTK----SYGK-VVPWAP---QLK 338 (454)
Q Consensus 271 ~~~~v~vs~Gs-~~---~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~~~~~----~nv~-v~~~vp---~~~ 338 (454)
+++.|.+.-|+ .. ..+.+.+.++++.+.+.+.++++. ++......-+.+.+..+ .++. +.+..+ ..+
T Consensus 179 ~~~~i~l~pga~~~~~k~wp~~~~~~l~~~L~~~~~~vvl~-g~~~e~~~~~~i~~~~~~~~~~~~~~l~g~~sl~e~~a 257 (348)
T 1psw_A 179 ERPMIGFCPGAEFGPAKRWPHYHYAELAKQLIDEGYQVVLF-GSAKDHEAGNEILAALNTEQQAWCRNLAGETQLDQAVI 257 (348)
T ss_dssp SSCEEEEECCCTTCGGGSCCHHHHHHHHHHHHHTTCEEEEC-CCGGGHHHHHHHHTTSCHHHHTTEEECTTTSCHHHHHH
T ss_pred CCcEEEEECCCCccccCCCCHHHHHHHHHHHHHCCCeEEEE-eChhhHHHHHHHHHhhhhccccceEeccCcCCHHHHHH
Confidence 45678888887 31 235778888888888778887775 44332222222222111 2332 233332 358
Q ss_pred hhcccCcceEEecCCchhHHHHHHcCCCeecc
Q 012893 339 ILEHSSVCVFVTHCGWNSTIEGITGGVPMVCR 370 (454)
Q Consensus 339 ll~~~~~~~~I~HgG~gsv~eal~~GvP~i~~ 370 (454)
++.+++ ++|+.- .|+++-|.+.|+|+|++
T Consensus 258 li~~a~--l~I~~D-sg~~HlAaa~g~P~v~l 286 (348)
T 1psw_A 258 LIAACK--AIVTND-SGLMHVAAALNRPLVAL 286 (348)
T ss_dssp HHHTSS--EEEEES-SHHHHHHHHTTCCEEEE
T ss_pred HHHhCC--EEEecC-CHHHHHHHHcCCCEEEE
Confidence 898887 999974 46677799999999865
No 53
>3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A
Probab=97.49 E-value=0.0019 Score=65.34 Aligned_cols=136 Identities=15% Similarity=0.160 Sum_probs=89.8
Q ss_pred cEEEEeeCCCCCCCHHHHHHHHHHHHhcCCCEEEE--EcCC-cc-cccchhhhh-hhCCCceEeeccChHh---hhcccC
Q 012893 273 SVIYISFGSMITPPRAEVIALAEALEAIGFPFLWS--FRGN-AE-EQLPKGFLE-RTKSYGKVVPWAPQLK---ILEHSS 344 (454)
Q Consensus 273 ~~v~vs~Gs~~~~~~~~~~~~~~~~~~~~~~~i~~--~~~~-~~-~~l~~~~~~-~~~~nv~v~~~vp~~~---ll~~~~ 344 (454)
.++|.+|++.....+..+....+.+++.+..++|. .+.. .. ..+-..+.+ .+.+++.+.+.+|+.+ .+..+|
T Consensus 441 ~v~Fg~fn~~~Ki~p~~l~~WarIL~~vP~s~L~l~~~g~~~g~~~~~~~~~~~~GI~~Rv~F~g~~p~~e~la~y~~aD 520 (631)
T 3q3e_A 441 VVNIGIASTTMKLNPYFLEALKAIRDRAKVKVHFHFALGQSNGITHPYVERFIKSYLGDSATAHPHSPYHQYLRILHNCD 520 (631)
T ss_dssp EEEEEEEECSTTCCHHHHHHHHHHHHHCSSEEEEEEEESSCCGGGHHHHHHHHHHHHGGGEEEECCCCHHHHHHHHHTCS
T ss_pred eEEEEECCccccCCHHHHHHHHHHHHhCCCcEEEEEecCCCchhhHHHHHHHHHcCCCccEEEcCCCCHHHHHHHHhcCc
Confidence 58999999988888889888888888866555543 4422 11 111112211 2346778888888654 445555
Q ss_pred cceEEec---CCchhHHHHHHcCCCeecccccc-chhHHHHHHHHhhceeec-CcCCCCCHHHHHHHHHHHhcCc
Q 012893 345 VCVFVTH---CGWNSTIEGITGGVPMVCRPVFA-DQALNQRIIETAWGIGVG-VXGEKFTKDETVNALKQVLSSE 414 (454)
Q Consensus 345 ~~~~I~H---gG~gsv~eal~~GvP~i~~P~~~-DQ~~nA~~v~~~~G~G~~-~~~~~~~~~~l~~av~~vl~~~ 414 (454)
+++.- +|.+|+.||+++|||+|+.+-.. -...-+..+... |+.-. +.. +.++..+...++.+|+
T Consensus 521 --IfLDpfpy~GgtTtlEALwmGVPVVTl~G~~~asRvgaSlL~~~-GLpE~LIA~---d~eeYv~~Av~La~D~ 589 (631)
T 3q3e_A 521 --MMVNPFPFGNTNGIIDMVTLGLVGVCKTGAEVHEHIDEGLFKRL-GLPEWLIAN---TVDEYVERAVRLAENH 589 (631)
T ss_dssp --EEECCSSSCCSHHHHHHHHTTCCEEEECCSSHHHHHHHHHHHHT-TCCGGGEES---SHHHHHHHHHHHHHCH
T ss_pred --EEEeCCcccCChHHHHHHHcCCCEEeccCCcHHHHhHHHHHHhc-CCCcceecC---CHHHHHHHHHHHhCCH
Confidence 77643 78899999999999999987432 122333445556 76542 332 6788888888888887
No 54
>3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A*
Probab=97.49 E-value=0.00019 Score=68.03 Aligned_cols=146 Identities=16% Similarity=0.109 Sum_probs=96.1
Q ss_pred EEEEeeCCCCCCCHHHHHHHHHHHHhcCCCEEEEEcCCcccccchhhhhhhCCCceEeeccChHhh---hcccCcceEEe
Q 012893 274 VIYISFGSMITPPRAEVIALAEALEAIGFPFLWSFRGNAEEQLPKGFLERTKSYGKVVPWAPQLKI---LEHSSVCVFVT 350 (454)
Q Consensus 274 ~v~vs~Gs~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~~~~~~nv~v~~~vp~~~l---l~~~~~~~~I~ 350 (454)
.+++..|+.+.. ..+..+ ..+.++++...+.. . .. +||...+++|+..+ +..++.+++.+
T Consensus 179 ~~i~yaG~l~k~--~~L~~l-----~~~~~f~ivG~G~~-~--------~l-~nV~f~G~~~~~el~~~l~~~~~~lv~~ 241 (339)
T 3rhz_A 179 REIHFPGNPERF--SFVKEW-----KYDIPLKVYTWQNV-E--------LP-QNVHKINYRPDEQLLMEMSQGGFGLVWM 241 (339)
T ss_dssp EEEEECSCTTTC--GGGGGC-----CCSSCEEEEESCCC-C--------CC-TTEEEEECCCHHHHHHHHHTEEEEECCC
T ss_pred cEEEEeCCcchh--hHHHhC-----CCCCeEEEEeCCcc-c--------Cc-CCEEEeCCCCHHHHHHHHHhCCEEEEEC
Confidence 566778888731 122111 24667666655432 1 12 39999999998655 44445444443
Q ss_pred cCCc---------hhHHHHHHcCCCeeccccccchhHHHHHHHHhhceeecCcCCCCCHHHHHHHHHHHhcCchHHHHHH
Q 012893 351 HCGW---------NSTIEGITGGVPMVCRPVFADQALNQRIIETAWGIGVGVXGEKFTKDETVNALKQVLSSEEGKRMRE 421 (454)
Q Consensus 351 HgG~---------gsv~eal~~GvP~i~~P~~~DQ~~nA~~v~~~~G~G~~~~~~~~~~~~l~~av~~vl~~~~~~~~~~ 421 (454)
-+.. +-+.|++++|+|+|+.+ ...++..+++. |+|..++ +.+++.+++.++.. ++.+.|++
T Consensus 242 ~~~~~~y~~~~~P~Kl~eymA~G~PVI~~~----~~~~~~~v~~~-~~G~~~~----~~~e~~~~i~~l~~-~~~~~m~~ 311 (339)
T 3rhz_A 242 DDKDKEYQSLYCSYKLGSFLAAGIPVIVQE----GIANQELIENN-GLGWIVK----DVEEAIMKVKNVNE-DEYIELVK 311 (339)
T ss_dssp CGGGHHHHTTCCCHHHHHHHHHTCCEEEET----TCTTTHHHHHH-TCEEEES----SHHHHHHHHHHCCH-HHHHHHHH
T ss_pred CCchhHHHHhcChHHHHHHHHcCCCEEEcc----ChhHHHHHHhC-CeEEEeC----CHHHHHHHHHHhCH-HHHHHHHH
Confidence 3323 34789999999999754 56788899999 9999886 46888888888643 34568999
Q ss_pred HHHHHHHHHHHHHhhCCChHHHHHHHHHH
Q 012893 422 NVGALKKLAFKAVESDGSSTKNFKALVEV 450 (454)
Q Consensus 422 ~a~~l~~~~~~~~~~~~~~~~~~~~~~~~ 450 (454)
|+++.++++++ +..+...+..-+..
T Consensus 312 na~~~a~~~~~----~~f~k~~l~~~~~~ 336 (339)
T 3rhz_A 312 NVRSFNPILRK----GFFTRRLLTESVFQ 336 (339)
T ss_dssp HHHHHTHHHHT----THHHHHHHHHHHHH
T ss_pred HHHHHHHHhhc----cHHHHHHHHHHHHH
Confidence 99999888886 34444444444433
No 55
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=96.72 E-value=0.041 Score=51.51 Aligned_cols=132 Identities=14% Similarity=0.111 Sum_probs=77.1
Q ss_pred CCcEEEEeeCCCCC---CCHHHHHHHHHHHHhcCCCEEEEEcCCcccccchhhhhhhCCCceEeeccC---hHhhhcccC
Q 012893 271 NASVIYISFGSMIT---PPRAEVIALAEALEAIGFPFLWSFRGNAEEQLPKGFLERTKSYGKVVPWAP---QLKILEHSS 344 (454)
Q Consensus 271 ~~~~v~vs~Gs~~~---~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~~~~~~nv~v~~~vp---~~~ll~~~~ 344 (454)
+++.|.+.-|+... .+.+.+.++++.+.+.+.++++..++......-+...+.. .++.+.+..+ -.+++.+++
T Consensus 177 ~~~~i~l~pga~~~~k~wp~~~~~~l~~~L~~~~~~vvl~~g~~~e~~~~~~i~~~~-~~~~l~g~~sl~el~ali~~a~ 255 (326)
T 2gt1_A 177 AGEYAVFLHATTRDDKHWPEEHWRELIGLLADSGIRIKLPWGAPHEEERAKRLAEGF-AYVEVLPKMSLEGVARVLAGAK 255 (326)
T ss_dssp TTSEEEEECCCSSGGGSCCHHHHHHHHHHTTTTCCEEEECCSSHHHHHHHHHHHTTC-TTEEECCCCCHHHHHHHHHTCS
T ss_pred CCCEEEEEeCCCCccccCCHHHHHHHHHHHHHCCCcEEEecCCHHHHHHHHHHHhhC-CcccccCCCCHHHHHHHHHhCC
Confidence 34677777777642 3677888888888767777766645432222222222222 2444444333 358888887
Q ss_pred cceEEecCCchhHHHHHHcCCCeecc--ccccchhHHHHHHHHhhcee-ecC-----cCCCCCHHHHHHHHHHHhcC
Q 012893 345 VCVFVTHCGWNSTIEGITGGVPMVCR--PVFADQALNQRIIETAWGIG-VGV-----XGEKFTKDETVNALKQVLSS 413 (454)
Q Consensus 345 ~~~~I~HgG~gsv~eal~~GvP~i~~--P~~~DQ~~nA~~v~~~~G~G-~~~-----~~~~~~~~~l~~av~~vl~~ 413 (454)
++|+.-. |+++=|.+.|+|+|++ |.... .++ -||-. ..+ -...++++++.+++.++|++
T Consensus 256 --l~I~~DS-G~~HlAaa~g~P~v~lfg~t~p~--~~~-----P~~~~~~~~~~~~~cm~~I~~~~V~~~i~~~l~~ 322 (326)
T 2gt1_A 256 --FVVSVDT-GLSHLTAALDRPNITVYGPTDPG--LIG-----GYGKNQMVCRAPGNELSQLTANAVKQFIEENAEK 322 (326)
T ss_dssp --EEEEESS-HHHHHHHHTTCCEEEEESSSCHH--HHC-----CCSSSEEEEECGGGCGGGCCHHHHHHHHHHTTTT
T ss_pred --EEEecCC-cHHHHHHHcCCCEEEEECCCChh--hcC-----CCCCCceEecCCcccccCCCHHHHHHHHHHHHHH
Confidence 9999843 3344466799999977 32111 110 01111 111 12357999999999999875
No 56
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=95.98 E-value=0.014 Score=56.88 Aligned_cols=79 Identities=11% Similarity=0.023 Sum_probs=57.2
Q ss_pred CCceEeeccChH---hhhcccCcceEEecC---Cch-hHHHHHHcCCCeeccccccchhHHHHHHHHhhceeecCcCCCC
Q 012893 326 SYGKVVPWAPQL---KILEHSSVCVFVTHC---GWN-STIEGITGGVPMVCRPVFADQALNQRIIETAWGIGVGVXGEKF 398 (454)
Q Consensus 326 ~nv~v~~~vp~~---~ll~~~~~~~~I~Hg---G~g-sv~eal~~GvP~i~~P~~~DQ~~nA~~v~~~~G~G~~~~~~~~ 398 (454)
++|.+.+++|+. .++..++ ++|.-+ |.| ++.||+++|+|+|+ -..+ ....++.- ..|..++..
T Consensus 295 ~~v~f~G~~~~~~l~~~~~~ad--v~v~pS~~E~~g~~~lEAmA~G~PVV~-~~~g----~~e~v~~~-~~G~lv~~~-- 364 (413)
T 2x0d_A 295 IHLNSLGKLTLEDYADLLKRSS--IGISLMISPHPSYPPLEMAHFGLRVIT-NKYE----NKDLSNWH-SNIVSLEQL-- 364 (413)
T ss_dssp EEEEEEESCCHHHHHHHHHHCC--EEECCCSSSSCCSHHHHHHHTTCEEEE-ECBT----TBCGGGTB-TTEEEESSC--
T ss_pred CcEEEcCCCCHHHHHHHHHhCC--EEEEecCCCCCCcHHHHHHhCCCcEEE-eCCC----cchhhhcC-CCEEEeCCC--
Confidence 678888999864 6677777 777532 444 57999999999997 2222 12334444 467777664
Q ss_pred CHHHHHHHHHHHhcCc
Q 012893 399 TKDETVNALKQVLSSE 414 (454)
Q Consensus 399 ~~~~l~~av~~vl~~~ 414 (454)
+++.++++|.++++|+
T Consensus 365 d~~~la~ai~~ll~~~ 380 (413)
T 2x0d_A 365 NPENIAETLVELCMSF 380 (413)
T ss_dssp SHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHcCH
Confidence 8899999999999886
No 57
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=94.48 E-value=0.66 Score=46.58 Aligned_cols=132 Identities=14% Similarity=0.116 Sum_probs=75.8
Q ss_pred EEEEeeCCCCCC-CHHHHHHHHHHHHhcCCCEEEEEcCCccc-ccchhhhhhhCCCceEeeccChH---hhhcccCcceE
Q 012893 274 VIYISFGSMITP-PRAEVIALAEALEAIGFPFLWSFRGNAEE-QLPKGFLERTKSYGKVVPWAPQL---KILEHSSVCVF 348 (454)
Q Consensus 274 ~v~vs~Gs~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~~~~~~nv~v~~~vp~~---~ll~~~~~~~~ 348 (454)
.+++..|..... ..+.+...+..+.+.+.++++...+.... ..-.......+.++.+....+.. .++..++ ++
T Consensus 328 p~i~~vgRl~~~Kg~~~li~a~~~l~~~~~~l~l~G~G~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~aD--~~ 405 (536)
T 3vue_A 328 PLIAFIGRLEEQKGPDVMAAAIPELMQEDVQIVLLGTGKKKFEKLLKSMEEKYPGKVRAVVKFNAPLAHLIMAGAD--VL 405 (536)
T ss_dssp CEEEEECCBSGGGCHHHHHHHHHHHTTSSCEEEEECCBCHHHHHHHHHHHHHSTTTEEEECSCCHHHHHHHHHHCS--EE
T ss_pred cEEEEEeeccccCChHHHHHHHHHhHhhCCeEEEEeccCchHHHHHHHHHhhcCCceEEEEeccHHHHHHHHHhhh--ee
Confidence 455567777532 23334444444444567777665554211 11112223345788888777753 4676666 78
Q ss_pred EecC---Cch-hHHHHHHcCCCeeccccccchhHHHHHHHHhhceeecCcC--------CCCCHHHHHHHHHHHhc
Q 012893 349 VTHC---GWN-STIEGITGGVPMVCRPVFADQALNQRIIETAWGIGVGVXG--------EKFTKDETVNALKQVLS 412 (454)
Q Consensus 349 I~Hg---G~g-sv~eal~~GvP~i~~P~~~DQ~~nA~~v~~~~G~G~~~~~--------~~~~~~~l~~av~~vl~ 412 (454)
|.-+ |+| +++||+++|+|.|+-.. .-....|..- .-|..... ...+.+.|.++|+++++
T Consensus 406 v~PS~~E~fgl~~lEAma~G~PvI~s~~----gG~~e~V~dg-~~G~~~~~~~~~g~l~~~~d~~~la~ai~ral~ 476 (536)
T 3vue_A 406 AVPSRFEPCGLIQLQGMRYGTPCACAST----GGLVDTVIEG-KTGFHMGRLSVDCKVVEPSDVKKVAATLKRAIK 476 (536)
T ss_dssp EECCSCCSSCSHHHHHHHTTCCEEECSC----THHHHHCCBT-TTEEECCCCCSCTTCCCHHHHHHHHHHHHHHHH
T ss_pred ecccccCCCCHHHHHHHHcCCCEEEcCC----CCchheeeCC-CCccccccCCCceeEECCCCHHHHHHHHHHHHH
Confidence 7643 444 88999999999998654 3344444443 34432221 11256889999988775
No 58
>2iz6_A Molybdenum cofactor carrier protein; metal transport; 1.60A {Chlamydomonas reinhardtii} PDB: 2iz5_A 2iz7_A
Probab=87.60 E-value=4.4 Score=33.81 Aligned_cols=77 Identities=14% Similarity=0.107 Sum_probs=42.6
Q ss_pred eEeeccCh-H-hhhcccCcceEEecCCchhHHH---HHHcCCCeeccccccchhHHHHHHHHhhceeecCcCCCCCHHHH
Q 012893 329 KVVPWAPQ-L-KILEHSSVCVFVTHCGWNSTIE---GITGGVPMVCRPVFADQALNQRIIETAWGIGVGVXGEKFTKDET 403 (454)
Q Consensus 329 ~v~~~vp~-~-~ll~~~~~~~~I~HgG~gsv~e---al~~GvP~i~~P~~~DQ~~nA~~v~~~~G~G~~~~~~~~~~~~l 403 (454)
.+++..+. + .+...++ .+++--||.||.-| ++.+++|++++|.+. .....+... -.....-. -+++++
T Consensus 92 i~~~~~~~Rk~~m~~~sd-a~IvlpGg~GTL~E~~~al~~~kpV~~l~~~~---~~~gfi~~~-~~~~i~~~--~~~~e~ 164 (176)
T 2iz6_A 92 IVTGLGSARDNINALSSN-VLVAVGMGPGTAAEVALALKAKKPVVLLGTQP---EAEKFFTSL-DAGLVHVA--ADVAGA 164 (176)
T ss_dssp EECCCCSSSCCCCGGGCS-EEEEESCCHHHHHHHHHHHHTTCCEEEESCCH---HHHHHHHHH-CTTTEEEE--SSHHHH
T ss_pred EEcCCHHHHHHHHHHhCC-EEEEecCCccHHHHHHHHHHhCCcEEEEcCcc---cccccCChh-hcCeEEEc--CCHHHH
Confidence 34455553 2 3333454 57777899998655 567999999999832 111222222 11111111 266777
Q ss_pred HHHHHHHhc
Q 012893 404 VNALKQVLS 412 (454)
Q Consensus 404 ~~av~~vl~ 412 (454)
.+.+.+.+.
T Consensus 165 ~~~l~~~~~ 173 (176)
T 2iz6_A 165 IAAVKQLLA 173 (176)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 776666553
No 59
>1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A*
Probab=84.25 E-value=7.2 Score=38.34 Aligned_cols=105 Identities=14% Similarity=0.089 Sum_probs=62.2
Q ss_pred ceE-eeccChH---hhhcccCcceEEec---CCch-hHHHHHHcCC-----Ceecccccc--chhHHHHHHHHhhceeec
Q 012893 328 GKV-VPWAPQL---KILEHSSVCVFVTH---CGWN-STIEGITGGV-----PMVCRPVFA--DQALNQRIIETAWGIGVG 392 (454)
Q Consensus 328 v~v-~~~vp~~---~ll~~~~~~~~I~H---gG~g-sv~eal~~Gv-----P~i~~P~~~--DQ~~nA~~v~~~~G~G~~ 392 (454)
+.. .+++++. .++..++ +++.- =|.| ++.||+++|+ |+|+--+.+ ++- .-|+.
T Consensus 333 v~~~~g~v~~~el~~ly~~AD--v~v~pS~~EGfgLv~lEAmA~g~~~~~gpvV~S~~~G~~~~l----------~~g~l 400 (482)
T 1uqt_A 333 LYYLNQHFDRKLLMKIFRYSD--VGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAANEL----------TSALI 400 (482)
T ss_dssp EEEECSCCCHHHHHHHHHHCS--EEEECCSSBSCCHHHHHHHHHSCTTSCCEEEEETTBGGGGTC----------TTSEE
T ss_pred EEEeCCCCCHHHHHHHHHHcc--EEEECCCcccCCchHHHHHHhCCCCCCCCEEEECCCCCHHHh----------CCeEE
Confidence 443 4778864 5676777 67653 3555 7899999998 666654432 222 12455
Q ss_pred CcCCCCCHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHh
Q 012893 393 VXGEKFTKDETVNALKQVLSSEEGKRMRENVGALKKLAFKAVESDGSSTKNFKALVEVVN 452 (454)
Q Consensus 393 ~~~~~~~~~~l~~av~~vl~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 452 (454)
+++ .+.+.++++|.++|++++. .-+++.++..+.+++ .+...-.+.+++.+.
T Consensus 401 v~p--~d~~~lA~ai~~lL~~~~~-~r~~~~~~~~~~v~~-----~s~~~~a~~~l~~l~ 452 (482)
T 1uqt_A 401 VNP--YDRDEVAAALDRALTMSLA-ERISRHAEMLDVIVK-----NDINHWQECFISDLK 452 (482)
T ss_dssp ECT--TCHHHHHHHHHHHHTCCHH-HHHHHHHHHHHHHHH-----TCHHHHHHHHHHHHH
T ss_pred ECC--CCHHHHHHHHHHHHcCCHH-HHHHHHHHHHHHHHh-----CCHHHHHHHHHHHHH
Confidence 555 3789999999999986421 223333333333333 344455555655543
No 60
>3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A*
Probab=83.45 E-value=5.7 Score=39.10 Aligned_cols=108 Identities=12% Similarity=0.036 Sum_probs=68.3
Q ss_pred CceEeeccCh---HhhhcccCcceEEe---cCCchh-HHHHHHcC---CCeeccccccchhHHHHHHHHhhc-eeecCcC
Q 012893 327 YGKVVPWAPQ---LKILEHSSVCVFVT---HCGWNS-TIEGITGG---VPMVCRPVFADQALNQRIIETAWG-IGVGVXG 395 (454)
Q Consensus 327 nv~v~~~vp~---~~ll~~~~~~~~I~---HgG~gs-v~eal~~G---vP~i~~P~~~DQ~~nA~~v~~~~G-~G~~~~~ 395 (454)
.|.+.+.+|+ .+++..++ +++. .=|.|. ..||+++| .|+|+--+.+ .+ +.+ | -|+.+++
T Consensus 353 ~V~f~g~v~~~el~aly~~AD--v~vv~SlrEGfgLv~~EamA~~~~~g~lVlSe~aG----a~---~~l-~~~allVnP 422 (496)
T 3t5t_A 353 TVRIDNDNDVNHTIACFRRAD--LLIFNSTVDGQNLSTFEAPLVNERDADVILSETCG----AA---EVL-GEYCRSVNP 422 (496)
T ss_dssp SEEEEECCCHHHHHHHHHHCS--EEEECCSSBSCCSHHHHHHHHCSSCCEEEEETTBT----TH---HHH-GGGSEEECT
T ss_pred CEEEeCCCCHHHHHHHHHhcc--EEEECcccccCChhHHHHHHhCCCCCCEEEeCCCC----CH---HHh-CCCEEEECC
Confidence 4666788886 46676777 5554 358885 58999996 6666554433 11 122 2 3677776
Q ss_pred CCCCHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHh
Q 012893 396 EKFTKDETVNALKQVLSSEEGKRMRENVGALKKLAFKAVESDGSSTKNFKALVEVVN 452 (454)
Q Consensus 396 ~~~~~~~l~~av~~vl~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 452 (454)
. +.+.++++|.++|++++. .-+++.+++.+.+++ .+...-.+.|++.|.
T Consensus 423 ~--D~~~lA~AI~~aL~m~~~-er~~r~~~~~~~V~~-----~d~~~W~~~fl~~L~ 471 (496)
T 3t5t_A 423 F--DLVEQAEAISAALAAGPR-QRAEAAARRRDAARP-----WTLEAWVQAQLDGLA 471 (496)
T ss_dssp T--BHHHHHHHHHHHHHCCHH-HHHHHHHHHHHHHTT-----CBHHHHHHHHHHHHH
T ss_pred C--CHHHHHHHHHHHHcCCHH-HHHHHHHHHHHHHHH-----CCHHHHHHHHHHHHh
Confidence 4 899999999999987521 334444445444443 555566667776664
No 61
>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A*
Probab=82.99 E-value=3.7 Score=42.06 Aligned_cols=79 Identities=18% Similarity=0.218 Sum_probs=47.3
Q ss_pred CCceEe---eccCh---------HhhhcccCcceEEecC---Cch-hHHHHHHcCCCeeccccccchhHHHHHHH-----
Q 012893 326 SYGKVV---PWAPQ---------LKILEHSSVCVFVTHC---GWN-STIEGITGGVPMVCRPVFADQALNQRIIE----- 384 (454)
Q Consensus 326 ~nv~v~---~~vp~---------~~ll~~~~~~~~I~Hg---G~g-sv~eal~~GvP~i~~P~~~DQ~~nA~~v~----- 384 (454)
++|.|+ .|++. ..++..++ ++|.-+ |+| +.+||+++|+|.|+--..+ ....|.
T Consensus 490 drVKVIf~P~~L~~~d~lf~~d~~~~~~~ad--vfV~PS~~EgfGl~~LEAmA~G~PvI~s~~gG----~~d~V~dg~~~ 563 (725)
T 3nb0_A 490 DRVKMIFHPEFLNANNPILGLDYDEFVRGCH--LGVFPSYYEPWGYTPAECTVMGVPSITTNVSG----FGSYMEDLIET 563 (725)
T ss_dssp CSEEEEECCSCCCTTCSSSCCCHHHHHHHCS--EEECCCSSBSSCHHHHHHHHTTCCEEEETTBH----HHHHHHTTSCH
T ss_pred CceeEEEeccccCCCCccchhHHHHHHhhce--EEEeccccCCCCHHHHHHHHcCCCEEEeCCCC----hhhhhhccccc
Confidence 566654 67764 46787777 888654 444 8899999999999865533 112221
Q ss_pred --HhhceeecCc-CCCCCHHHHHHHHHHHh
Q 012893 385 --TAWGIGVGVX-GEKFTKDETVNALKQVL 411 (454)
Q Consensus 385 --~~~G~G~~~~-~~~~~~~~l~~av~~vl 411 (454)
.. +.|+.+. ....+.+++.++|.+.|
T Consensus 564 ~~~~-~tG~lV~~rd~~d~ee~aeaLa~aL 592 (725)
T 3nb0_A 564 NQAK-DYGIYIVDRRFKAPDESVEQLVDYM 592 (725)
T ss_dssp HHHH-HTTEEEECCSSSCHHHHHHHHHHHH
T ss_pred cCCC-CceEEEeCCCCCCHHHHHHHHHHHH
Confidence 12 3565553 22345555555555544
No 62
>2phj_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus VF5} PDB: 2wqk_A
Probab=78.89 E-value=15 Score=32.48 Aligned_cols=112 Identities=8% Similarity=0.021 Sum_probs=60.4
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHhhhcCCCcEEEEEEeCCCcCccccccccccCCCCeeEEeCCCCCCCCCCCCCCCc
Q 012893 10 RRHVAVLAFPFGTHAAPLLDLVRRLSEAALEEEVTFSFFSTAQSNGSLFMEKDELRDCKIVPYNVESGLPEGFRFTGNPR 89 (454)
Q Consensus 10 ~~~il~~~~~~~GH~~p~l~la~~L~~~~~G~~h~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 89 (454)
|||||++-=-+. |.--+.+|+++| ++.| +|+++.+...+.-.-.. ..+. ..+++..+..++.
T Consensus 1 ~M~ILlTNDDGi-~apGi~aL~~~l--~~~g---~V~VVAP~~~~Sg~g~s-it~~-~pl~~~~~~~~~~---------- 62 (251)
T 2phj_A 1 MPTFLLVNDDGY-FSPGINALREAL--KSLG---RVVVVAPDRNLSGVGHS-LTFT-EPLKMRKIDTDFY---------- 62 (251)
T ss_dssp -CEEEEECSSCT-TCHHHHHHHHHH--TTTS---EEEEEEESSCCTTSCCS-CCCS-SCEEEEEEETTEE----------
T ss_pred CCEEEEECCCCC-CCHHHHHHHHHH--HhcC---CEEEEecCCCccCCccc-eecC-CCeEEEEecCCCe----------
Confidence 478887765544 445577899999 7767 89999987655432221 0110 1344444422110
Q ss_pred chHHHHHHhchHHHHHHHHHHHHhc-C-CCccEEEEcC----------ch---hhHHHHHHHcCCCeEEEeC
Q 012893 90 EPVEHFLKATPGNFVRALEKAVAKT-G-LEISCLITDA----------FL---WFAAEMAEEMRVPWIAYWT 146 (454)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~pD~vi~d~----------~~---~~~~~~A~~lgiP~v~~~~ 146 (454)
.....+-. +.+.--+..+ . .+||+||+.. +. .++..-|..+|||.|.++.
T Consensus 63 ----~~v~GTPa---DCV~lal~~l~~~~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~ 127 (251)
T 2phj_A 63 ----TVIDGTPA---DCVHLGYRVILEEKKPDLVLSGINEGPNLGEDITYSGTVSGAMEGRILGIPSIAFSA 127 (251)
T ss_dssp ----EETTCCHH---HHHHHHHHTTTTTCCCSEEEEEEESSCCCGGGGGGCHHHHHHHHHHHTTCCEEEEEE
T ss_pred ----EEECCCHH---HHHHHHHHHhcCCCCCCEEEECCcCCCcCCCCCccchHHHHHHHHHHcCCCeEEEEc
Confidence 00011111 1111112222 2 5899999862 22 3455566889999999975
No 63
>2wqk_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus}
Probab=77.96 E-value=4.8 Score=35.74 Aligned_cols=40 Identities=8% Similarity=-0.066 Sum_probs=26.8
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHhhhcCCCcEEEEEEeCCCcCc
Q 012893 10 RRHVAVLAFPFGTHAAPLLDLVRRLSEAALEEEVTFSFFSTAQSNG 55 (454)
Q Consensus 10 ~~~il~~~~~~~GH~~p~l~la~~L~~~~~G~~h~V~~~~~~~~~~ 55 (454)
|+|||++-=-+. |--=+..|+++| ++.| | |+++++.....
T Consensus 1 Mp~ILlTNDDGi-~apGi~~L~~~l--~~~g--~-V~VvAP~~~~S 40 (251)
T 2wqk_A 1 MPTFLLVNDDGY-FSPGINALREAL--KSLG--R-VVVVAPDRNLS 40 (251)
T ss_dssp -CEEEEECSSCT-TCHHHHHHHHHH--TTTS--E-EEEEEESSCCT
T ss_pred CCEEEEEcCCCC-CcHHHHHHHHHH--HhCC--C-EEEEeeCCCCc
Confidence 467777654443 333466889999 8888 5 98888865543
No 64
>1g5t_A COB(I)alamin adenosyltransferase; P-loop protein, cobalamin biosynthesis, RECA fold; HET: ATP; 1.80A {Salmonella typhimurium} SCOP: c.37.1.11 PDB: 1g5r_A* 1g64_A*
Probab=73.38 E-value=27 Score=29.51 Aligned_cols=98 Identities=7% Similarity=0.005 Sum_probs=61.0
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHhhhcCCCcEEEEEEeCCCcC------ccccccccccCCCCeeEEeCCCCCCCCC
Q 012893 9 QRRHVAVLAFPFGTHAAPLLDLVRRLSEAALEEEVTFSFFSTAQSN------GSLFMEKDELRDCKIVPYNVESGLPEGF 82 (454)
Q Consensus 9 ~~~~il~~~~~~~GH~~p~l~la~~L~~~~~G~~h~V~~~~~~~~~------~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 82 (454)
.+-.|++.+..+.|=..-.+.+|.+. ..+| ++|.|+..-... +.++.. ++.+.....+|...
T Consensus 27 ~~g~i~v~tG~GkGKTTaA~GlalRA--~g~G--~rV~~vQF~Kg~~~~gE~~~l~~L-------~v~~~~~g~gf~~~- 94 (196)
T 1g5t_A 27 ERGIIIVFTGNGKGKTTAAFGTAARA--VGHG--KNVGVVQFIKGTWPNGERNLLEPH-------GVEFQVMATGFTWE- 94 (196)
T ss_dssp CCCCEEEEESSSSCHHHHHHHHHHHH--HHTT--CCEEEEESSCCSSCCHHHHHHGGG-------TCEEEECCTTCCCC-
T ss_pred cCceEEEECCCCCCHHHHHHHHHHHH--HHCC--CeEEEEEeeCCCCCccHHHHHHhC-------CcEEEEcccccccC-
Confidence 45688888888999999999999999 8899 999999664321 123333 57888776554321
Q ss_pred CCCCCCcchHHHHHHhchHHHHHHHHHHHHhc-CCCccEEEEcCchh
Q 012893 83 RFTGNPREPVEHFLKATPGNFVRALEKAVAKT-GLEISCLITDAFLW 128 (454)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~pD~vi~d~~~~ 128 (454)
... ...-. ......+....+.+ ..+.|+||.|-+.+
T Consensus 95 -----~~~-~~~~~----~~a~~~l~~a~~~l~~~~yDlvILDEi~~ 131 (196)
T 1g5t_A 95 -----TQN-READT----AACMAVWQHGKRMLADPLLDMVVLDELTY 131 (196)
T ss_dssp -----GGG-HHHHH----HHHHHHHHHHHHHTTCTTCSEEEEETHHH
T ss_pred -----CCC-cHHHH----HHHHHHHHHHHHHHhcCCCCEEEEeCCCc
Confidence 111 11111 11122233333333 35799999997653
No 65
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=71.83 E-value=3.1 Score=41.64 Aligned_cols=40 Identities=18% Similarity=0.064 Sum_probs=28.9
Q ss_pred CCCcEEEEEcCC------CccCHHHHHHHHHHHhhhcCCCcEEEEEEeCC
Q 012893 8 TQRRHVAVLAFP------FGTHAAPLLDLVRRLSEAALEEEVTFSFFSTA 51 (454)
Q Consensus 8 ~~~~~il~~~~~------~~GH~~p~l~la~~L~~~~~G~~h~V~~~~~~ 51 (454)
.++|||||+++. +.|=-.-+-+|.++| +++| |+|+++++.
T Consensus 7 ~~~MkIl~vs~E~~P~~K~GGLadvv~~L~~aL--~~~G--~~V~Vi~P~ 52 (536)
T 3vue_A 7 HHHMNVVFVGAEMAPWSKTGGLGDVLGGLPPAM--AANG--HRVMVISPR 52 (536)
T ss_dssp -CCCEEEEECSCBTTTBCSSHHHHHHHHHHHHH--HTTT--CEEEEEEEC
T ss_pred CCCcEEEEEEEeccchhccCcHHHHHHHHHHHH--HHcC--CeEEEEecC
Confidence 457999999752 222222355789999 9999 999999963
No 66
>1yt5_A Inorganic polyphosphate/ATP-NAD kinase; domain 1: alpha/beta domain2: beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Thermotoga maritima}
Probab=68.58 E-value=4.2 Score=36.32 Aligned_cols=52 Identities=21% Similarity=0.243 Sum_probs=38.7
Q ss_pred cceEEecCCchhHHHHHHc---CCCeeccccccchhHHHHHHHHhhceeecCcCCCCCHHHHHHHHHHHhcC
Q 012893 345 VCVFVTHCGWNSTIEGITG---GVPMVCRPVFADQALNQRIIETAWGIGVGVXGEKFTKDETVNALKQVLSS 413 (454)
Q Consensus 345 ~~~~I~HgG~gsv~eal~~---GvP~i~~P~~~DQ~~nA~~v~~~~G~G~~~~~~~~~~~~l~~av~~vl~~ 413 (454)
++++|+-||=||+.+++.. ++|.+.++. + .+|... ++.++++.++++.++++
T Consensus 42 ~D~vv~~GGDGTll~~a~~~~~~~PilGIn~-G-------------~~Gfl~---~~~~~~~~~al~~i~~g 96 (258)
T 1yt5_A 42 ADLIVVVGGDGTVLKAAKKAADGTPMVGFKA-G-------------RLGFLT---SYTLDEIDRFLEDLRNW 96 (258)
T ss_dssp CSEEEEEECHHHHHHHHTTBCTTCEEEEEES-S-------------SCCSSC---CBCGGGHHHHHHHHHTT
T ss_pred CCEEEEEeCcHHHHHHHHHhCCCCCEEEEEC-C-------------CCCccC---cCCHHHHHHHHHHHHcC
Confidence 4599999999999999887 888887752 1 112222 25688899999988875
No 67
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=67.05 E-value=3.7 Score=39.45 Aligned_cols=41 Identities=10% Similarity=0.079 Sum_probs=31.5
Q ss_pred CCCcEEEEEcCC-Cc----cCHHHHHHHHHHHhhhcCCCcEEEEEEeCCC
Q 012893 8 TQRRHVAVLAFP-FG----THAAPLLDLVRRLSEAALEEEVTFSFFSTAQ 52 (454)
Q Consensus 8 ~~~~~il~~~~~-~~----GH~~p~l~la~~L~~~~~G~~h~V~~~~~~~ 52 (454)
.++|||++++.. .. |=......++++| .++| |+|++++...
T Consensus 44 ~~~mrI~~v~~~~~p~~~~GG~~~v~~la~~L--~~~G--heV~Vvt~~~ 89 (413)
T 2x0d_A 44 IKGKRLNLLVPSINQEHMFGGISTALKLFEQF--DNKK--FKKRIILTDA 89 (413)
T ss_dssp CCSCEEEEEESCCCGGGCSHHHHHHHHHHTTS--CTTT--CEEEEEESSC
T ss_pred CCCceEEEEeCCCCccccccHHHHHHHHHHHH--HHcC--CceEEEEecC
Confidence 457899888753 22 3335688999999 9999 9999999854
No 68
>3zqu_A Probable aromatic acid decarboxylase; lyase; HET: FNR; 1.50A {Pseudomonas aeruginosa} SCOP: c.34.1.0
Probab=63.37 E-value=3.5 Score=35.47 Aligned_cols=46 Identities=11% Similarity=0.018 Sum_probs=38.9
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHhhhcCCCcEEEEEEeCCCcCccccc
Q 012893 9 QRRHVAVLAFPFGTHAAPLLDLVRRLSEAALEEEVTFSFFSTAQSNGSLFM 59 (454)
Q Consensus 9 ~~~~il~~~~~~~GH~~p~l~la~~L~~~~~G~~h~V~~~~~~~~~~~~~~ 59 (454)
++.||++...|+.|-+. ...|.+.| ++.| ++|.++.++.....+..
T Consensus 3 ~~k~IllgvTGaiaa~k-~~~ll~~L--~~~g--~eV~vv~T~~A~~fi~~ 48 (209)
T 3zqu_A 3 GPERITLAMTGASGAQY-GLRLLDCL--VQEE--REVHFLISKAAQLVMAT 48 (209)
T ss_dssp SCSEEEEEECSSSCHHH-HHHHHHHH--HHTT--CEEEEEECHHHHHHHHH
T ss_pred CCCEEEEEEECHHHHHH-HHHHHHHH--HHCC--CEEEEEECccHHHHHHH
Confidence 34799999999999888 89999999 8899 99999999776665543
No 69
>2i2c_A Probable inorganic polyphosphate/ATP-NAD kinase 1; NADP bound of lmnadk1, transferase; HET: DTA PG4; 1.85A {Listeria monocytogenes egd-e} PDB: 2i1w_A* 2i2a_A* 2i2b_A* 2i29_A* 2i2d_A* 2i2e_A* 3v7u_A* 3v7w_A* 3v7y_A* 3v80_A* 3v8m_A* 3v8n_A* 3v8p_A* 4dy6_A* 2i2f_A* 2q5f_A* 3v8q_A* 3v8r_A*
Probab=63.33 E-value=5.6 Score=35.75 Aligned_cols=52 Identities=8% Similarity=0.081 Sum_probs=38.0
Q ss_pred cceEEecCCchhHHHHHHc------CCCeeccccccchhHHHHHHHHhhceeecCcCCCCCHHHHHHHHHHHhcC
Q 012893 345 VCVFVTHCGWNSTIEGITG------GVPMVCRPVFADQALNQRIIETAWGIGVGVXGEKFTKDETVNALKQVLSS 413 (454)
Q Consensus 345 ~~~~I~HgG~gsv~eal~~------GvP~i~~P~~~DQ~~nA~~v~~~~G~G~~~~~~~~~~~~l~~av~~vl~~ 413 (454)
++++|+-||=||+.+++.. ++|++.+|.. -+|. ..++.++++.++++.++++
T Consensus 36 ~D~vv~lGGDGT~l~aa~~~~~~~~~~PilGIn~G--------------~lgf---l~~~~~~~~~~~l~~l~~g 93 (272)
T 2i2c_A 36 PEIVISIGGDGTFLSAFHQYEERLDEIAFIGIHTG--------------HLGF---YADWRPAEADKLVKLLAKG 93 (272)
T ss_dssp CSEEEEEESHHHHHHHHHHTGGGTTTCEEEEEESS--------------SCCS---SCCBCGGGHHHHHHHHHTT
T ss_pred CCEEEEEcCcHHHHHHHHHHhhcCCCCCEEEEeCC--------------CCCc---CCcCCHHHHHHHHHHHHcC
Confidence 3599999999999999875 8899888641 1121 1134677888888888875
No 70
>3qjg_A Epidermin biosynthesis protein EPID; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: FMN; 2.04A {Staphylococcus aureus} SCOP: c.34.1.0
Probab=62.47 E-value=8.8 Score=31.90 Aligned_cols=44 Identities=5% Similarity=-0.059 Sum_probs=37.4
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHhhhcCCCcEEEEEEeCCCcCccccc
Q 012893 11 RHVAVLAFPFGTHAAPLLDLVRRLSEAALEEEVTFSFFSTAQSNGSLFM 59 (454)
Q Consensus 11 ~~il~~~~~~~GH~~p~l~la~~L~~~~~G~~h~V~~~~~~~~~~~~~~ 59 (454)
.||++...++.|=+. ...+.+.| ++.| ++|.++.++...+++..
T Consensus 6 k~IllgvTGs~aa~k-~~~ll~~L--~~~g--~~V~vv~T~~A~~fi~~ 49 (175)
T 3qjg_A 6 ENVLICLCGSVNSIN-ISHYIIEL--KSKF--DEVNVIASTNGRKFING 49 (175)
T ss_dssp CEEEEEECSSGGGGG-HHHHHHHH--TTTC--SEEEEEECTGGGGGSCH
T ss_pred CEEEEEEeCHHHHHH-HHHHHHHH--HHCC--CEEEEEECcCHHHHhhH
Confidence 589999999887775 89999999 9999 99999999877666543
No 71
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=61.53 E-value=9.2 Score=30.26 Aligned_cols=43 Identities=7% Similarity=0.006 Sum_probs=36.5
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHhhhcCCCcEEEEEEeCCCcCc
Q 012893 9 QRRHVAVLAFPFGTHAAPLLDLVRRLSEAALEEEVTFSFFSTAQSNG 55 (454)
Q Consensus 9 ~~~~il~~~~~~~GH~~p~l~la~~L~~~~~G~~h~V~~~~~~~~~~ 55 (454)
++.||++.+.++-+|-....-++..| +..| ++|...+.....+
T Consensus 2 ~~~~vvla~~~~d~HdiG~~~v~~~l--~~~G--~~Vi~lG~~~p~e 44 (137)
T 1ccw_A 2 EKKTIVLGVIGSDCHAVGNKILDHAF--TNAG--FNVVNIGVLSPQE 44 (137)
T ss_dssp CCCEEEEEEETTCCCCHHHHHHHHHH--HHTT--CEEEEEEEEECHH
T ss_pred CCCEEEEEeCCCchhHHHHHHHHHHH--HHCC--CEEEECCCCCCHH
Confidence 35799999999999999999999999 9999 9999887643333
No 72
>3qjg_A Epidermin biosynthesis protein EPID; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: FMN; 2.04A {Staphylococcus aureus} SCOP: c.34.1.0
Probab=61.42 E-value=37 Score=28.03 Aligned_cols=114 Identities=12% Similarity=0.045 Sum_probs=68.7
Q ss_pred cEEEEeeCCCCCCCHHHHHHHHHHHHhcCCCEEEEEcCCcccccchhhhhhhCCCceEe---eccChHhhhcccCcceEE
Q 012893 273 SVIYISFGSMITPPRAEVIALAEALEAIGFPFLWSFRGNAEEQLPKGFLERTKSYGKVV---PWAPQLKILEHSSVCVFV 349 (454)
Q Consensus 273 ~~v~vs~Gs~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~~~~~~nv~v~---~~vp~~~ll~~~~~~~~I 349 (454)
.+++.-.|+.... ....+++.+.+.|+.+-++........+.....+...+.|+.. .++++..+-..+| .++|
T Consensus 7 ~IllgvTGs~aa~---k~~~ll~~L~~~g~~V~vv~T~~A~~fi~~~~l~~l~~~v~~~~~~~~~~hi~l~~~aD-~~vV 82 (175)
T 3qjg_A 7 NVLICLCGSVNSI---NISHYIIELKSKFDEVNVIASTNGRKFINGEILKQFCDNYYDEFEDPFLNHVDIANKHD-KIII 82 (175)
T ss_dssp EEEEEECSSGGGG---GHHHHHHHHTTTCSEEEEEECTGGGGGSCHHHHHHHCSCEECTTTCTTCCHHHHHHTCS-EEEE
T ss_pred EEEEEEeCHHHHH---HHHHHHHHHHHCCCEEEEEECcCHHHHhhHHHHHHhcCCEEecCCCCccccccccchhC-EEEE
Confidence 3555556666543 2445677777778877777776554434332233333333221 3466777666676 4788
Q ss_pred ecCCchhHH-------------HHHHcCCCeeccccc----cc---hhHHHHHHHHhhceee
Q 012893 350 THCGWNSTI-------------EGITGGVPMVCRPVF----AD---QALNQRIIETAWGIGV 391 (454)
Q Consensus 350 ~HgG~gsv~-------------eal~~GvP~i~~P~~----~D---Q~~nA~~v~~~~G~G~ 391 (454)
.-+-.||+. -++..++|++++|-. .+ ...|...+.+. |+=+
T Consensus 83 aPaTanTlakiA~GiaDnLlt~~~la~~~pvvl~Pamn~~m~~~p~~~~Nl~~L~~~-G~~i 143 (175)
T 3qjg_A 83 LPATSNTINKIANGICDNLLLTICHTAFEKLSIFPNMNLRMWENPVTQNNIRLLKDY-GVSI 143 (175)
T ss_dssp EEECHHHHHHHHTTCCCSHHHHHHHTCGGGEEEEECEEHHHHTCHHHHHHHHHHHHT-TCEE
T ss_pred eeCCHHHHHHHHccccCCHHHHHHHHcCCCEEEEecCChhhhcCHHHHHHHHHHHHC-CCEE
Confidence 888777654 347779999999932 22 34577777777 7643
No 73
>2an1_A Putative kinase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, transferase; 2.00A {Salmonella typhimurium}
Probab=59.99 E-value=7 Score=35.46 Aligned_cols=95 Identities=13% Similarity=0.088 Sum_probs=52.8
Q ss_pred HHHHHHHHHHHhcCCCEEEEEcCCcccccchhhhhhhCCCceEeeccChHhhhcccCcceEEecCCchhHHHHHHc----
Q 012893 288 AEVIALAEALEAIGFPFLWSFRGNAEEQLPKGFLERTKSYGKVVPWAPQLKILEHSSVCVFVTHCGWNSTIEGITG---- 363 (454)
Q Consensus 288 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~~~~~~nv~v~~~vp~~~ll~~~~~~~~I~HgG~gsv~eal~~---- 363 (454)
.....+.+.+++.+..+.+..... +.+. . ... ........-..++ ++|+-||=||+.+++..
T Consensus 21 ~~~~~i~~~l~~~g~~v~~~~~~~------~~~~--~-~~~---~~~~~~~~~~~~D--~vi~~GGDGT~l~a~~~~~~~ 86 (292)
T 2an1_A 21 TTHEMLYRWLCDQGYEVIVEQQIA------HELQ--L-KNV---PTGTLAEIGQQAD--LAVVVGGDGNMLGAARTLARY 86 (292)
T ss_dssp CHHHHHHHHHHHTTCEEEEEHHHH------HHTT--C-SSC---CEECHHHHHHHCS--EEEECSCHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHCCCEEEEecchh------hhcc--c-ccc---cccchhhcccCCC--EEEEEcCcHHHHHHHHHhhcC
Confidence 456677888888887765432210 0000 0 000 0011222333344 99999999999999843
Q ss_pred CCCeeccccccchhHHHHHHHHhhceeecCcCCCCCHHHHHHHHHHHhcC
Q 012893 364 GVPMVCRPVFADQALNQRIIETAWGIGVGVXGEKFTKDETVNALKQVLSS 413 (454)
Q Consensus 364 GvP~i~~P~~~DQ~~nA~~v~~~~G~G~~~~~~~~~~~~l~~av~~vl~~ 413 (454)
++|.+.++.. -+|.- ..+.++++.++++.++++
T Consensus 87 ~~P~lGI~~G--------------t~gfl---a~~~~~~~~~al~~i~~g 119 (292)
T 2an1_A 87 DINVIGINRG--------------NLGFL---TDLDPDNALQQLSDVLEG 119 (292)
T ss_dssp SCEEEEBCSS--------------SCCSS---CCBCTTSHHHHHHHHHTT
T ss_pred CCCEEEEECC--------------CcccC---CcCCHHHHHHHHHHHHcC
Confidence 7898888621 01111 113456677777777764
No 74
>1qzu_A Hypothetical protein MDS018; alpha-beta sandwich, lyase; HET: FMN; 2.91A {Homo sapiens} SCOP: c.34.1.1
Probab=59.41 E-value=13 Score=31.76 Aligned_cols=48 Identities=17% Similarity=0.046 Sum_probs=37.6
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHhhhc-CCCcEEEEEEeCCCcCcccccc
Q 012893 8 TQRRHVAVLAFPFGTHAAPLLDLVRRLSEAA-LEEEVTFSFFSTAQSNGSLFME 60 (454)
Q Consensus 8 ~~~~~il~~~~~~~GH~~p~l~la~~L~~~~-~G~~h~V~~~~~~~~~~~~~~~ 60 (454)
.++.||++...|+.+=+. ...+.+.| ++ .| ++|.++.++...+++...
T Consensus 17 l~~k~IllgvTGsiaa~k-~~~lv~~L--~~~~g--~~V~vv~T~~A~~fi~~~ 65 (206)
T 1qzu_A 17 ERKFHVLVGVTGSVAALK-LPLLVSKL--LDIPG--LEVAVVTTERAKHFYSPQ 65 (206)
T ss_dssp CSSEEEEEEECSSGGGGT-HHHHHHHH--C---C--EEEEEEECTGGGGSSCGG
T ss_pred cCCCEEEEEEeChHHHHH-HHHHHHHH--hcccC--CEEEEEECHhHHHHhCHH
Confidence 445799999999988554 69999999 88 89 999999998777666544
No 75
>2ywr_A Phosphoribosylglycinamide formyltransferase; rossmann fold, structural genomics, NPPSFA; 1.77A {Aquifex aeolicus}
Probab=58.53 E-value=43 Score=28.71 Aligned_cols=103 Identities=9% Similarity=0.122 Sum_probs=56.1
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHhhhcCCCcE--EEEEEeCCCcCc----cccccccccCCCCeeEEeCCC-CCCCCC
Q 012893 10 RRHVAVLAFPFGTHAAPLLDLVRRLSEAALEEEV--TFSFFSTAQSNG----SLFMEKDELRDCKIVPYNVES-GLPEGF 82 (454)
Q Consensus 10 ~~~il~~~~~~~GH~~p~l~la~~L~~~~~G~~h--~V~~~~~~~~~~----~~~~~~~~~~~~~~~~~~i~~-~~~~~~ 82 (454)
|+||+|+.+++.. -+.++.++| .+.+ | +|..+.+..... ..++. |+.+..++. .+
T Consensus 1 m~rI~vl~SG~g~---~~~~~l~~l--~~~~--~~~~i~~Vvs~~~~~~~~~~A~~~-------gIp~~~~~~~~~---- 62 (216)
T 2ywr_A 1 MLKIGVLVSGRGS---NLQAIIDAI--ESGK--VNASIELVISDNPKAYAIERCKKH-------NVECKVIQRKEF---- 62 (216)
T ss_dssp CEEEEEEECSCCH---HHHHHHHHH--HTTS--SCEEEEEEEESCTTCHHHHHHHHH-------TCCEEECCGGGS----
T ss_pred CCEEEEEEeCCcH---HHHHHHHHH--HhCC--CCCeEEEEEeCCCChHHHHHHHHc-------CCCEEEeCcccc----
Confidence 4699999877653 356677788 7777 6 776655433222 23333 777776531 11
Q ss_pred CCCCCCcchHHHHHHhchHHHHHHHHHHHHhcCCCccEEEEcCc-hhhHHHHHHHcCCCeEEEeCc
Q 012893 83 RFTGNPREPVEHFLKATPGNFVRALEKAVAKTGLEISCLITDAF-LWFAAEMAEEMRVPWIAYWTA 147 (454)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pD~vi~d~~-~~~~~~~A~~lgiP~v~~~~~ 147 (454)
. . ...+.+.+.+.+++. +||++|.-.+ -.....+-+.....++-++++
T Consensus 63 ------~-~--------r~~~~~~~~~~l~~~--~~Dliv~a~y~~il~~~~l~~~~~~~iNiHpS 111 (216)
T 2ywr_A 63 ------P-S--------KKEFEERMALELKKK--GVELVVLAGFMRILSHNFLKYFPNKVINIHPS 111 (216)
T ss_dssp ------S-S--------HHHHHHHHHHHHHHT--TCCEEEESSCCSCCCHHHHTTSTTCEEEEESS
T ss_pred ------c-c--------hhhhhHHHHHHHHhc--CCCEEEEeCchhhCCHHHHhhccCCeEEEcCC
Confidence 0 0 112222233344554 9999887643 223333445555567777654
No 76
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=58.35 E-value=33 Score=31.99 Aligned_cols=95 Identities=20% Similarity=0.284 Sum_probs=48.6
Q ss_pred EEEEeeCCCCCCCHHHHHHHHHHHHhcCCCEEEEEcCCccc--ccch-hhh-hhhC-CCc---eEeecc--C--------
Q 012893 274 VIYISFGSMITPPRAEVIALAEALEAIGFPFLWSFRGNAEE--QLPK-GFL-ERTK-SYG---KVVPWA--P-------- 335 (454)
Q Consensus 274 ~v~vs~Gs~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~l~~-~~~-~~~~-~nv---~v~~~v--p-------- 335 (454)
+++.+.||.+... -...+++.+.+.|+.++|++.....+ .++. ++. ...+ ... ...+++ +
T Consensus 5 i~i~~GGTgGHi~--palala~~L~~~g~~V~~vg~~~g~e~~~v~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (365)
T 3s2u_A 5 VLIMAGGTGGHVF--PALACAREFQARGYAVHWLGTPRGIENDLVPKAGLPLHLIQVSGLRGKGLKSLVKAPLELLKSLF 82 (365)
T ss_dssp EEEECCSSHHHHH--HHHHHHHHHHHTTCEEEEEECSSSTHHHHTGGGTCCEEECC--------------CHHHHHHHHH
T ss_pred EEEEcCCCHHHHH--HHHHHHHHHHhCCCEEEEEECCchHhhchhhhcCCcEEEEECCCcCCCCHHHHHHHHHHHHHHHH
Confidence 5555555543111 12467888999999999887654321 1111 000 0000 000 000000 0
Q ss_pred -hHhhhcccCcceEEecCCchhH---HHHHHcCCCeecc
Q 012893 336 -QLKILEHSSVCVFVTHCGWNST---IEGITGGVPMVCR 370 (454)
Q Consensus 336 -~~~ll~~~~~~~~I~HgG~gsv---~eal~~GvP~i~~ 370 (454)
-..++..-..|++|++||+-++ ..|...|+|.++.
T Consensus 83 ~~~~~l~~~~PDvVi~~g~~~s~p~~laA~~~~iP~vih 121 (365)
T 3s2u_A 83 QALRVIRQLRPVCVLGLGGYVTGPGGLAARLNGVPLVIH 121 (365)
T ss_dssp HHHHHHHHHCCSEEEECSSSTHHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHhcCCCEEEEcCCcchHHHHHHHHHcCCCEEEE
Confidence 1223444444599999998775 4567789999863
No 77
>1u0t_A Inorganic polyphosphate/ATP-NAD kinase; alpha-beta, beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Mycobacterium tuberculosis} SCOP: e.52.1.1 PDB: 1u0r_A 1y3i_A* 1y3h_A
Probab=57.40 E-value=6.3 Score=36.14 Aligned_cols=52 Identities=12% Similarity=0.119 Sum_probs=36.5
Q ss_pred cceEEecCCchhHHHHHHc----CCCeeccccccchhHHHHHHHHhhceeecCcCCCCCHHHHHHHHHHHhcC
Q 012893 345 VCVFVTHCGWNSTIEGITG----GVPMVCRPVFADQALNQRIIETAWGIGVGVXGEKFTKDETVNALKQVLSS 413 (454)
Q Consensus 345 ~~~~I~HgG~gsv~eal~~----GvP~i~~P~~~DQ~~nA~~v~~~~G~G~~~~~~~~~~~~l~~av~~vl~~ 413 (454)
++++|+-||=||+.+++.. ++|++.++.. -+|... ++.++++.+++..++++
T Consensus 76 ~d~vi~~GGDGT~l~a~~~~~~~~~pvlgi~~G--------------~~gfl~---~~~~~~~~~~~~~i~~g 131 (307)
T 1u0t_A 76 CELVLVLGGDGTFLRAAELARNASIPVLGVNLG--------------RIGFLA---EAEAEAIDAVLEHVVAQ 131 (307)
T ss_dssp CCCEEEEECHHHHHHHHHHHHHHTCCEEEEECS--------------SCCSSC---SEEGGGHHHHHHHHHHT
T ss_pred CCEEEEEeCCHHHHHHHHHhccCCCCEEEEeCC--------------CCccCc---ccCHHHHHHHHHHHHcC
Confidence 3599999999999999865 8999888631 112111 23567777788877764
No 78
>3auf_A Glycinamide ribonucleotide transformylase 1; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; 2.07A {Symbiobacterium toebii}
Probab=57.39 E-value=94 Score=26.82 Aligned_cols=105 Identities=9% Similarity=0.062 Sum_probs=58.9
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHhhhcC--CCcEEEEEEeCCCcCc----cccccccccCCCCeeEEeCCC-CCCC
Q 012893 8 TQRRHVAVLAFPFGTHAAPLLDLVRRLSEAAL--EEEVTFSFFSTAQSNG----SLFMEKDELRDCKIVPYNVES-GLPE 80 (454)
Q Consensus 8 ~~~~~il~~~~~~~GH~~p~l~la~~L~~~~~--G~~h~V~~~~~~~~~~----~~~~~~~~~~~~~~~~~~i~~-~~~~ 80 (454)
.+|+||+|+.+++.. -+.++.++| .+. + ++|..+.+..... ..++. |+.+..++. .+
T Consensus 20 ~~~~rI~~l~SG~g~---~~~~~l~~l--~~~~~~--~~I~~Vvt~~~~~~~~~~A~~~-------gIp~~~~~~~~~-- 83 (229)
T 3auf_A 20 GHMIRIGVLISGSGT---NLQAILDGC--REGRIP--GRVAVVISDRADAYGLERARRA-------GVDALHMDPAAY-- 83 (229)
T ss_dssp TTCEEEEEEESSCCH---HHHHHHHHH--HTTSSS--EEEEEEEESSTTCHHHHHHHHT-------TCEEEECCGGGS--
T ss_pred CCCcEEEEEEeCCcH---HHHHHHHHH--HhCCCC--CeEEEEEcCCCchHHHHHHHHc-------CCCEEEECcccc--
Confidence 456899999887753 256677778 554 7 8887666542222 23333 788876631 11
Q ss_pred CCCCCCCCcchHHHHHHhchHHHHHHHHHHHHhcCCCccEEEEcCc-hhhHHHHHHHcCCCeEEEeCc
Q 012893 81 GFRFTGNPREPVEHFLKATPGNFVRALEKAVAKTGLEISCLITDAF-LWFAAEMAEEMRVPWIAYWTA 147 (454)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pD~vi~d~~-~~~~~~~A~~lgiP~v~~~~~ 147 (454)
. . ...+.+.+.+.++.. +||++|.-.+ -.....+-+.....++-++++
T Consensus 84 --------~-~--------r~~~~~~~~~~l~~~--~~Dliv~agy~~IL~~~~l~~~~~~~iNiHpS 132 (229)
T 3auf_A 84 --------P-S--------RTAFDAALAERLQAY--GVDLVCLAGYMRLVRGPMLTAFPNRILNIHPS 132 (229)
T ss_dssp --------S-S--------HHHHHHHHHHHHHHT--TCSEEEESSCCSCCCHHHHHHSTTCEEEEESS
T ss_pred --------c-c--------hhhccHHHHHHHHhc--CCCEEEEcChhHhCCHHHHhhccCCEEEEccC
Confidence 0 0 012222233444555 9999887644 233334445566677777654
No 79
>2e6c_A 5'-nucleotidase SURE; SURE protein, cowith manganese ION and AMP hydrolase; 2.05A {Thermus thermophilus} PDB: 2e6b_A 2e69_A 2e6e_A 2e6g_A 2e6h_A
Probab=57.10 E-value=1e+02 Score=27.00 Aligned_cols=115 Identities=10% Similarity=-0.007 Sum_probs=60.4
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHhhhcCCCcEEEEEEeCCCcCccccccccccCCCCeeEEeCCCCCCCCCCCCCCCcc
Q 012893 11 RHVAVLAFPFGTHAAPLLDLVRRLSEAALEEEVTFSFFSTAQSNGSLFMEKDELRDCKIVPYNVESGLPEGFRFTGNPRE 90 (454)
Q Consensus 11 ~~il~~~~~~~GH~~p~l~la~~L~~~~~G~~h~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 90 (454)
||||++-=-+. |--=+..|+++| ++.| +|+++.+...+.-.-.. ..+. ..+++..++.+.+.. ....
T Consensus 1 M~ILlTNDDGi-~apGi~aL~~~l--~~~g---~V~VVAP~~~~Sg~g~s-iTl~-~pl~~~~~~~~~~~~-----~~~~ 67 (244)
T 2e6c_A 1 MRILVTNDDGI-YSPGLWALAEAA--SQFG---EVFVAAPDTEQSAAGHA-ITIA-HPVRAYPHPSPLHAP-----HFPA 67 (244)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHH--TTTS---EEEEEEECSSCCCCCSS-CCCS-SCBEEEECCCCTTSC-----CCCE
T ss_pred CeEEEEcCCCC-CcHhHHHHHHHH--HhCC---CEEEEecCCCCcCCccc-ccCC-CCeEEEEeccCcCCC-----CCce
Confidence 46666554333 334477899999 7777 79999987655432221 1111 246666664321100 0001
Q ss_pred hHHHHHHhchHH-HHHHHHHHHHhcCCCccEEEEcC----------c---hhhHHHHHHHcCCCeEEEeC
Q 012893 91 PVEHFLKATPGN-FVRALEKAVAKTGLEISCLITDA----------F---LWFAAEMAEEMRVPWIAYWT 146 (454)
Q Consensus 91 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~pD~vi~d~----------~---~~~~~~~A~~lgiP~v~~~~ 146 (454)
.....+-.. ..-.+. +..+||+||+.. + ..++..=|..+|||.|.++.
T Consensus 68 ---~~v~GTPaDCV~lal~-----l~~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~ 129 (244)
T 2e6c_A 68 ---YRVRGTPADCVALGLH-----LFGPVDLVLSGVNLGSNLGHEIWHSGTVAAAKQGYLFGLSAAAFSV 129 (244)
T ss_dssp ---EEEESCHHHHHHHHHH-----HSCSCCEEEEEEEESCCCGGGGGGCHHHHHHHHHHHTTCEEEEEEE
T ss_pred ---EEEcCcHHHHHHHHHc-----CCCCCCEEEECCccCCCCCcCeechHhHHHHHHHHhcCCCeEEEec
Confidence 011111111 111112 245899999862 1 23455566789999999975
No 80
>1p3y_1 MRSD protein; flavoprotein, FMN, rossmann fold, HFCD family, oxdidative decarboxylation, cystein, lantibiotics, mersacidin, oxidore; HET: FAD; 2.54A {Bacillus SP} SCOP: c.34.1.1
Probab=56.79 E-value=44 Score=28.09 Aligned_cols=135 Identities=11% Similarity=-0.002 Sum_probs=77.1
Q ss_pred EEEEeeCCCCCCCHHHHHHHHHHHHhcCCCEEEEEcCCcccccchhhhhhhCCCceEee-----ccChHhhhcccCcceE
Q 012893 274 VIYISFGSMITPPRAEVIALAEALEAIGFPFLWSFRGNAEEQLPKGFLERTKSYGKVVP-----WAPQLKILEHSSVCVF 348 (454)
Q Consensus 274 ~v~vs~Gs~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~~~~~~nv~v~~-----~vp~~~ll~~~~~~~~ 348 (454)
+++.-.|+..... ...+++.+.+.|+.+-++........+.....+...++++..- .+.+-.+...+| .++
T Consensus 11 IllgvTGs~aa~k---~~~l~~~L~~~g~~V~vv~T~~A~~fi~~~~~~~l~~~v~~~~~~~~~~~~hi~l~~~aD-~~v 86 (194)
T 1p3y_1 11 LLIGICGSISSVG---ISSYLLYFKSFFKEIRVVMTKTAEDLIPAHTVSYFCDHVYSEHGENGKRHSHVEIGRWAD-IYC 86 (194)
T ss_dssp EEEEECSCGGGGG---THHHHHHHTTTSSEEEEEECHHHHHHSCHHHHGGGSSEEECTTCSSSCCCCHHHHHHHCS-EEE
T ss_pred EEEEEECHHHHHH---HHHHHHHHHHCCCEEEEEEchhHHHHHHHHHHHHhcCCEeccccccCCCcCcccccccCC-EEE
Confidence 5555555554322 2355666666677766666654322222222233444532211 244566656666 488
Q ss_pred EecCCchhHHH-------------HHHcCCCeecccc----ccch---hHHHHHHHHhhceeecCcCC------------
Q 012893 349 VTHCGWNSTIE-------------GITGGVPMVCRPV----FADQ---ALNQRIIETAWGIGVGVXGE------------ 396 (454)
Q Consensus 349 I~HgG~gsv~e-------------al~~GvP~i~~P~----~~DQ---~~nA~~v~~~~G~G~~~~~~------------ 396 (454)
|.-+-.||+.- ++..++|++++|- .... ..|...+.+. |+=+.-+..
T Consensus 87 IaPaTanTlAKiA~GiaDnLlt~~a~a~~~pvvl~Pamn~~m~~~p~~~~Nl~~L~~~-G~~iv~p~~g~~f~lacg~~g 165 (194)
T 1p3y_1 87 IIPATANILGQTANGVAMNLVATTVLAHPHNTIFFPNMNDLMWNKTVVSRNIEQLRKD-GHIVIEPVEIMAFEIATGTRK 165 (194)
T ss_dssp EEEECHHHHHHHHTTCCSSHHHHHHHHSSSCCEEEECCCHHHHTCHHHHHHHHHHHHH-TCEECCCBCCC----------
T ss_pred EeCCCHHHHHHHHhhccCCHHHHHHHHcCCCEEEEECCChhhcCCHHHHHHHHHHHHC-CCEEECCCCCcccccccCCcC
Confidence 88887776543 3567899999995 2232 5577788887 864332111
Q ss_pred ----CCCHHHHHHHHHHHhcC
Q 012893 397 ----KFTKDETVNALKQVLSS 413 (454)
Q Consensus 397 ----~~~~~~l~~av~~vl~~ 413 (454)
-.+.++|.+.+.+.+.+
T Consensus 166 ~~g~~~~~~~iv~~v~~~l~~ 186 (194)
T 1p3y_1 166 PNRGLITPDKALLAIEKGFKE 186 (194)
T ss_dssp --CBCCCHHHHHHHHHHHCC-
T ss_pred cCCCCCCHHHHHHHHHHHhcc
Confidence 13678888888887764
No 81
>1ydh_A AT5G11950; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; 2.15A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4d_A
Probab=56.72 E-value=22 Score=30.54 Aligned_cols=44 Identities=11% Similarity=0.043 Sum_probs=29.8
Q ss_pred ceEeeccCh--HhhhcccCcceEEecCCchhHHHHH---------HcCCCeecccc
Q 012893 328 GKVVPWAPQ--LKILEHSSVCVFVTHCGWNSTIEGI---------TGGVPMVCRPV 372 (454)
Q Consensus 328 v~v~~~vp~--~~ll~~~~~~~~I~HgG~gsv~eal---------~~GvP~i~~P~ 372 (454)
..++...+. ..++..++ .+++--||.||.-|.. .+++|++++-.
T Consensus 89 ~~~~~~~~~Rk~~~~~~sd-a~I~lpGG~GTLdElfE~lt~~qlg~~~kPvvll~~ 143 (216)
T 1ydh_A 89 VRVVADMHERKAAMAQEAE-AFIALPGGYGTMEELLEMITWSQLGIHKKTVGLLNV 143 (216)
T ss_dssp EEEESSHHHHHHHHHHHCS-EEEECSCSHHHHHHHHHHHHHHHHTSCCCEEEEECG
T ss_pred ccccCCHHHHHHHHHHhCC-EEEEeCCCccHHHHHHHHHHHHHhcccCCCEEEecC
Confidence 344444442 24444555 5788899999988776 57999998864
No 82
>3vot_A L-amino acid ligase, BL00235; ATP-grAsp motif, ATP-binding; HET: ADP PG4; 1.80A {Bacillus licheniformis}
Probab=56.59 E-value=55 Score=31.13 Aligned_cols=33 Identities=21% Similarity=0.345 Sum_probs=21.4
Q ss_pred HHHHHHhcCCCccEEEE--cCchhhHHHHHHHcCCCe
Q 012893 107 LEKAVAKTGLEISCLIT--DAFLWFAAEMAEEMRVPW 141 (454)
Q Consensus 107 ~~~~~~~~~~~pD~vi~--d~~~~~~~~~A~~lgiP~ 141 (454)
+.++.+.. ++|.|++ |.....+..+|+.+|+|.
T Consensus 67 ~~~~~~~~--~id~V~~~~e~~~~~~a~l~e~lglpg 101 (425)
T 3vot_A 67 VRQTFVEF--PFDGVMTLFEPALPFTAKAAEALNLPG 101 (425)
T ss_dssp HHHHHHHS--CCSEEECCCGGGHHHHHHHHHHTTCSS
T ss_pred HHHhhhhc--CCCEEEECCchhHHHHHHHHHHcCCCC
Confidence 33344443 8898885 334445567889999994
No 83
>1sbz_A Probable aromatic acid decarboxylase; FMN binding, PAD1, UBIX, montreal-kingston bacterial structu genomics initiative, BSGI; HET: FMN; 2.00A {Escherichia coli} SCOP: c.34.1.1
Probab=56.45 E-value=5 Score=34.14 Aligned_cols=43 Identities=9% Similarity=0.005 Sum_probs=36.7
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHhhhcC-CCcEEEEEEeCCCcCcccc
Q 012893 11 RHVAVLAFPFGTHAAPLLDLVRRLSEAAL-EEEVTFSFFSTAQSNGSLF 58 (454)
Q Consensus 11 ~~il~~~~~~~GH~~p~l~la~~L~~~~~-G~~h~V~~~~~~~~~~~~~ 58 (454)
|||++...|+.|-+. ...+.+.| ++. | ++|.++.++...+++.
T Consensus 1 ~~IllgvTGsiaa~k-~~~ll~~L--~~~~g--~~V~vv~T~~A~~fi~ 44 (197)
T 1sbz_A 1 MKLIVGMTGATGAPL-GVALLQAL--REMPN--VETHLVMSKWAKTTIE 44 (197)
T ss_dssp CEEEEEECSSSCHHH-HHHHHHHH--HTCTT--CEEEEEECHHHHHHHH
T ss_pred CEEEEEEeChHHHHH-HHHHHHHH--HhccC--CEEEEEECchHHHHhH
Confidence 589999999988776 99999999 888 9 9999999977666554
No 84
>3qua_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.10A {Mycobacterium smegmatis str}
Probab=55.64 E-value=45 Score=28.17 Aligned_cols=44 Identities=11% Similarity=-0.006 Sum_probs=28.9
Q ss_pred ceEeeccCh--HhhhcccCcceEEecCCchhHHHHHH---------cCCCeecccc
Q 012893 328 GKVVPWAPQ--LKILEHSSVCVFVTHCGWNSTIEGIT---------GGVPMVCRPV 372 (454)
Q Consensus 328 v~v~~~vp~--~~ll~~~~~~~~I~HgG~gsv~eal~---------~GvP~i~~P~ 372 (454)
..+++.... ..++.+++ .+++--||.||.-|... +++|++++-.
T Consensus 101 ~i~~~~~~~Rk~~m~~~sd-a~IalPGG~GTldEl~e~lt~~qlg~~~kPvvlln~ 155 (199)
T 3qua_A 101 LIVTDTMRERKREMEHRSD-AFIALPGGIGTLEEFFEAWTAGYLGMHDKPLILLDP 155 (199)
T ss_dssp EEEESSHHHHHHHHHHHCS-EEEECSCCHHHHHHHHHHHHHHHTTSCCCCEEEECT
T ss_pred eEEcCCHHHHHHHHHHhcC-ccEEeCCCccHHHHHHHHHHHHHhccCCCCEEEEcC
Confidence 344554442 34445555 47778899999888743 6899988753
No 85
>3lqk_A Dipicolinate synthase subunit B; flavoprotein, PSI2, MCSG, structural protein structure initiative, midwest center for structural genomics; 2.10A {Bacillus halodurans}
Probab=55.31 E-value=12 Score=31.85 Aligned_cols=46 Identities=17% Similarity=0.080 Sum_probs=36.6
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHhhhcCCCcEEEEEEeCCCcCcccc
Q 012893 9 QRRHVAVLAFPFGTHAAPLLDLVRRLSEAALEEEVTFSFFSTAQSNGSLF 58 (454)
Q Consensus 9 ~~~~il~~~~~~~GH~~p~l~la~~L~~~~~G~~h~V~~~~~~~~~~~~~ 58 (454)
+..||++...|+.|=+.-.+.+.+.| ++.| ++|.++.++...+.+.
T Consensus 6 ~~k~I~lgiTGs~aa~~k~~~ll~~L--~~~g--~eV~vv~T~~A~~~i~ 51 (201)
T 3lqk_A 6 AGKHVGFGLTGSHCTYHEVLPQMERL--VELG--AKVTPFVTHTVQTTDT 51 (201)
T ss_dssp TTCEEEEECCSCGGGGGGTHHHHHHH--HHTT--CEEEEECSSCSCCTTC
T ss_pred CCCEEEEEEEChHHHHHHHHHHHHHH--hhCC--CEEEEEEChhHHHHHH
Confidence 45799999999854443799999999 8999 9999999976655543
No 86
>3pfn_A NAD kinase; structural genomics consortium, SNP, SGC, transferase; 2.70A {Homo sapiens}
Probab=54.38 E-value=8.8 Score=36.04 Aligned_cols=52 Identities=12% Similarity=0.111 Sum_probs=35.5
Q ss_pred cceEEecCCchhHHHHHH----cCCCeeccccccchhHHHHHHHHhhceeecCcCCCCCHHHHHHHHHHHhcC
Q 012893 345 VCVFVTHCGWNSTIEGIT----GGVPMVCRPVFADQALNQRIIETAWGIGVGVXGEKFTKDETVNALKQVLSS 413 (454)
Q Consensus 345 ~~~~I~HgG~gsv~eal~----~GvP~i~~P~~~DQ~~nA~~v~~~~G~G~~~~~~~~~~~~l~~av~~vl~~ 413 (454)
++++|+=||=||++.|+. .++|++.+ ..|..-=-.++..+++.+++.+++++
T Consensus 109 ~DlvI~lGGDGT~L~aa~~~~~~~~PvlGi-----------------N~G~LGFLt~~~~~~~~~~l~~vl~g 164 (365)
T 3pfn_A 109 IDFIICLGGDGTLLYASSLFQGSVPPVMAF-----------------HLGSLGFLTPFSFENFQSQVTQVIEG 164 (365)
T ss_dssp CSEEEEESSTTHHHHHHHHCSSSCCCEEEE-----------------ESSSCTTTCCEESTTHHHHHHHHHHS
T ss_pred CCEEEEEcChHHHHHHHHHhccCCCCEEEE-----------------cCCCCccceeecHHHHHHHHHHHHcC
Confidence 359999999999999987 35787766 33321111234567777888877764
No 87
>3lqk_A Dipicolinate synthase subunit B; flavoprotein, PSI2, MCSG, structural protein structure initiative, midwest center for structural genomics; 2.10A {Bacillus halodurans}
Probab=54.29 E-value=45 Score=28.26 Aligned_cols=137 Identities=16% Similarity=0.055 Sum_probs=78.2
Q ss_pred cEEEEeeCCCCCCCHHHHHHHHHHHHhcCCCEEEEEcCCcccccchh--------hhhhhCCCceEeec--cChHhhhcc
Q 012893 273 SVIYISFGSMITPPRAEVIALAEALEAIGFPFLWSFRGNAEEQLPKG--------FLERTKSYGKVVPW--APQLKILEH 342 (454)
Q Consensus 273 ~~v~vs~Gs~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~--------~~~~~~~nv~v~~~--vp~~~ll~~ 342 (454)
.+++.-.||.... +....+++.+.+.|+.+-++........+... ..+...++-.+.++ .++...-..
T Consensus 9 ~I~lgiTGs~aa~--~k~~~ll~~L~~~g~eV~vv~T~~A~~~i~~~~~~~~~~~~l~~l~g~~v~~~~~~~~hi~~s~~ 86 (201)
T 3lqk_A 9 HVGFGLTGSHCTY--HEVLPQMERLVELGAKVTPFVTHTVQTTDTKFGESSEWINKIKQITEEPIVDSMVKAEPFGPKTP 86 (201)
T ss_dssp EEEEECCSCGGGG--GGTHHHHHHHHHTTCEEEEECSSCSCCTTCCTTCSCHHHHHHHHHCCSCCBCSHHHHGGGTTTSC
T ss_pred EEEEEEEChHHHH--HHHHHHHHHHhhCCCEEEEEEChhHHHHHHHhhchhHHHHHHHHHhCCCeEeecCcccccccccc
Confidence 4555555665432 12345666676778877777665442222111 11222222212211 223333334
Q ss_pred cCcceEEecCCchhHHH----------------HHHcCCCeecccc----ccchhHHHHHHHHhhceeecCcCC------
Q 012893 343 SSVCVFVTHCGWNSTIE----------------GITGGVPMVCRPV----FADQALNQRIIETAWGIGVGVXGE------ 396 (454)
Q Consensus 343 ~~~~~~I~HgG~gsv~e----------------al~~GvP~i~~P~----~~DQ~~nA~~v~~~~G~G~~~~~~------ 396 (454)
++ .++|.-|-.||+.- ++..++|+|++|- ...++.|...+.+. |+=+..+..
T Consensus 87 aD-~mvIaP~TanTlAkiA~GiaDnLlt~aa~~~Lk~~~plvl~Pamn~~m~~h~~Nm~~L~~~-G~~i~~P~~~~~~~~ 164 (201)
T 3lqk_A 87 LD-CMVIAPMTGNSTSKFANAMTDSPVLMGAKATLRNGKPVVVGISTNDALGLNGINIMRLMAT-KNIYFIPFGQDNPQV 164 (201)
T ss_dssp CS-EEEEEEECHHHHHHHHTTCCCSHHHHHHHHHHHTTCCEEEEEEETTTTTTTHHHHHHHHTS-TTEEECCEEESCTTT
T ss_pred cC-EEEEccCCHHHHHHHHCcccCcHHHHHHHHHhhcCCCEEEEECCChhHHHhHHHHHHHHHC-CCEEECCCCcccccc
Confidence 44 57888877775432 2557999999995 46778899999998 865554321
Q ss_pred C-----CCHHHHHHHHHHHhcC
Q 012893 397 K-----FTKDETVNALKQVLSS 413 (454)
Q Consensus 397 ~-----~~~~~l~~av~~vl~~ 413 (454)
. ...+.|.+.|.+.|++
T Consensus 165 ~p~s~~a~~~~i~~tv~~al~~ 186 (201)
T 3lqk_A 165 KPNSLVARMEALPETIEAALRG 186 (201)
T ss_dssp CTTCEEECGGGHHHHHHHHHTT
T ss_pred CCCcccCCHHHHHHHHHHHHhc
Confidence 1 2347888889888875
No 88
>3sbx_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: AMP; 2.50A {Mycobacterium marinum M}
Probab=52.88 E-value=30 Score=29.02 Aligned_cols=42 Identities=10% Similarity=-0.035 Sum_probs=28.1
Q ss_pred eEeeccCh--HhhhcccCcceEEecCCchhHHHHH---------HcCCCeeccc
Q 012893 329 KVVPWAPQ--LKILEHSSVCVFVTHCGWNSTIEGI---------TGGVPMVCRP 371 (454)
Q Consensus 329 ~v~~~vp~--~~ll~~~~~~~~I~HgG~gsv~eal---------~~GvP~i~~P 371 (454)
.+++.... ..++.+++ .+++--||.||.-|.. .+++|++++-
T Consensus 93 i~~~~~~~Rk~~m~~~sd-a~IalPGG~GTLdElfe~lt~~qlg~~~kPvvlln 145 (189)
T 3sbx_A 93 VVTETMWERKQVMEDRAN-AFITLPGGVGTLDELLDVWTEGYLGMHDKSIVVLD 145 (189)
T ss_dssp EEESSHHHHHHHHHHHCS-EEEECSCCHHHHHHHHHHHHHHHTTSCCCCEEEEC
T ss_pred EEcCCHHHHHHHHHHHCC-EEEEeCCCcchHHHHHHHHHHHHhcccCCCEEEec
Confidence 34444442 34455555 5777889999998875 3689999874
No 89
>4dzz_A Plasmid partitioning protein PARF; deviant walker BOX, DNA segregation, unknown function; HET: ADP; 1.80A {Escherichia coli} PDB: 4e03_A* 4e07_A* 4e09_A*
Probab=52.08 E-value=37 Score=28.17 Aligned_cols=38 Identities=8% Similarity=0.068 Sum_probs=30.5
Q ss_pred cEEEEEcC--CCccCHHHHHHHHHHHhhhcCCCcEEEEEEeCCC
Q 012893 11 RHVAVLAF--PFGTHAAPLLDLVRRLSEAALEEEVTFSFFSTAQ 52 (454)
Q Consensus 11 ~~il~~~~--~~~GH~~p~l~la~~L~~~~~G~~h~V~~~~~~~ 52 (454)
||++.+.. ++-|=..=.+.||..| .++| ++|.++-...
T Consensus 1 M~vi~v~s~kgG~GKTt~a~~la~~l--a~~g--~~vlliD~D~ 40 (206)
T 4dzz_A 1 MKVISFLNPKGGSGKTTAVINIATAL--SRSG--YNIAVVDTDP 40 (206)
T ss_dssp CEEEEECCSSTTSSHHHHHHHHHHHH--HHTT--CCEEEEECCT
T ss_pred CeEEEEEeCCCCccHHHHHHHHHHHH--HHCC--CeEEEEECCC
Confidence 35555544 6889999999999999 7899 9999987753
No 90
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=51.97 E-value=11 Score=30.86 Aligned_cols=42 Identities=17% Similarity=0.152 Sum_probs=37.1
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHhhhcCCCcEEEEEEeCCCc
Q 012893 8 TQRRHVAVLAFPFGTHAAPLLDLVRRLSEAALEEEVTFSFFSTAQS 53 (454)
Q Consensus 8 ~~~~~il~~~~~~~GH~~p~l~la~~L~~~~~G~~h~V~~~~~~~~ 53 (454)
.++.||++.+.++-+|-....-++..| +..| ++|.+.+....
T Consensus 16 ~~~~~vlla~~~gd~HdiG~~~va~~l--~~~G--~eVi~lG~~~p 57 (161)
T 2yxb_A 16 RRRYKVLVAKMGLDGHDRGAKVVARAL--RDAG--FEVVYTGLRQT 57 (161)
T ss_dssp CCSCEEEEEEESSSSCCHHHHHHHHHH--HHTT--CEEECCCSBCC
T ss_pred CCCCEEEEEeCCCCccHHHHHHHHHHH--HHCC--CEEEECCCCCC
Confidence 457899999999999999999999999 9999 99999876443
No 91
>3zzm_A Bifunctional purine biosynthesis protein PURH; transferase, hydrolase; HET: JLN; 2.20A {Mycobacterium tuberculosis} PDB: 4a1o_A*
Probab=51.85 E-value=20 Score=35.03 Aligned_cols=99 Identities=16% Similarity=0.115 Sum_probs=54.1
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHhhhcCCCcEEEEEEeCCCcCccccccccccCCCCeeEEeCC--CCCCCCCCC-CC
Q 012893 10 RRHVAVLAFPFGTHAAPLLDLVRRLSEAALEEEVTFSFFSTAQSNGSLFMEKDELRDCKIVPYNVE--SGLPEGFRF-TG 86 (454)
Q Consensus 10 ~~~il~~~~~~~GH~~p~l~la~~L~~~~~G~~h~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~--~~~~~~~~~-~~ 86 (454)
+.++++..+ |=.-++.+|+.| .+.| +++. ++....+.+++. |+....+. -++|+...- ..
T Consensus 10 i~~aLISVs----DK~glvelAk~L--~~lG--feI~--ATgGTak~L~e~-------GI~v~~V~~vTgfPEil~GRVK 72 (523)
T 3zzm_A 10 IRRALISVY----DKTGLVDLAQGL--SAAG--VEII--STGSTAKTIADT-------GIPVTPVEQLTGFPEVLDGRVK 72 (523)
T ss_dssp CCEEEEEES----SCTTHHHHHHHH--HHTT--CEEE--ECHHHHHHHHTT-------TCCCEEHHHHHSCCCCTTTTSS
T ss_pred ccEEEEEEe----ccccHHHHHHHH--HHCC--CEEE--EcchHHHHHHHc-------CCceeeccccCCCchhhCCccc
Confidence 345666663 455588999999 8889 7664 554555667666 88877764 355554321 11
Q ss_pred CC-cchHHHHHHhchHHHHHHHHHHHHhcCCCccEEEEcCch
Q 012893 87 NP-REPVEHFLKATPGNFVRALEKAVAKTGLEISCLITDAFL 127 (454)
Q Consensus 87 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pD~vi~d~~~ 127 (454)
.+ .....-++.. ....+.++++.+.-=...|+||.+...
T Consensus 73 TLHP~ihgGiLa~--r~~~~h~~~l~~~~i~~iDlVvvNLYP 112 (523)
T 3zzm_A 73 TLHPRVHAGLLAD--LRKSEHAAALEQLGIEAFELVVVNLYP 112 (523)
T ss_dssp SCSHHHHHHHHCC--TTSHHHHHHHHHHTCCCCSEEEEECCC
T ss_pred cCCchhhhhhccC--CCCHHHHHHHHHCCCCceeEEEEeCCC
Confidence 12 2222222211 222233333322212467999999654
No 92
>2ejb_A Probable aromatic acid decarboxylase; phenylacrylic acid decarboxylase, X-RAY diffraction, structural genomics, NPPSFA; 2.15A {Aquifex aeolicus}
Probab=50.93 E-value=8.2 Score=32.54 Aligned_cols=44 Identities=11% Similarity=0.076 Sum_probs=37.2
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHhhhcCCCcEEEEEEeCCCcCccccc
Q 012893 11 RHVAVLAFPFGTHAAPLLDLVRRLSEAALEEEVTFSFFSTAQSNGSLFM 59 (454)
Q Consensus 11 ~~il~~~~~~~GH~~p~l~la~~L~~~~~G~~h~V~~~~~~~~~~~~~~ 59 (454)
.||++...|+.|-+ =...+.++| ++.| ++|.++.++...+.+..
T Consensus 2 k~IllgvTGs~aa~-k~~~l~~~L--~~~g--~~V~vv~T~~A~~~i~~ 45 (189)
T 2ejb_A 2 QKIALCITGASGVI-YGIKLLQVL--EELD--FSVDLVISRNAKVVLKE 45 (189)
T ss_dssp CEEEEEECSSTTHH-HHHHHHHHH--HHTT--CEEEEEECHHHHHHHHH
T ss_pred CEEEEEEECHHHHH-HHHHHHHHH--HHCC--CEEEEEEChhHHHHhhH
Confidence 58999999998855 589999999 8899 99999999876666654
No 93
>3afo_A NADH kinase POS5; alpha/beta+BETA sandwich, ATP-binding, mitochondrion NADP, nucleotide-binding, transferase, transit peptide; HET: NAI; 2.00A {Saccharomyces cerevisiae}
Probab=50.78 E-value=17 Score=34.45 Aligned_cols=59 Identities=22% Similarity=0.357 Sum_probs=39.1
Q ss_pred hHhhhcccCcceEEecCCchhHHHHHHc----CC-CeeccccccchhHHHHHHHHhhceeecCcCCCCCHHHHHHHHHHH
Q 012893 336 QLKILEHSSVCVFVTHCGWNSTIEGITG----GV-PMVCRPVFADQALNQRIIETAWGIGVGVXGEKFTKDETVNALKQV 410 (454)
Q Consensus 336 ~~~ll~~~~~~~~I~HgG~gsv~eal~~----Gv-P~i~~P~~~DQ~~nA~~v~~~~G~G~~~~~~~~~~~~l~~av~~v 410 (454)
...+-..++ ++|+-||=||+..|+.. ++ |++.+... -+|.. .++..+++.+++.++
T Consensus 108 ~~~~~~~~D--lVIvlGGDGTlL~aa~~~~~~~vpPiLGIN~G--------------~lGFL---t~~~~~~~~~al~~i 168 (388)
T 3afo_A 108 EQDIVNRTD--LLVTLGGDGTILHGVSMFGNTQVPPVLAFALG--------------TLGFL---SPFDFKEHKKVFQEV 168 (388)
T ss_dssp HHHHHHHCS--EEEEEESHHHHHHHHHTTTTSCCCCEEEEECS--------------SCCSS---CCEEGGGHHHHHHHH
T ss_pred hhhcccCCC--EEEEEeCcHHHHHHHHHhcccCCCeEEEEECC--------------CcccC---CcCChHHHHHHHHHH
Confidence 334444455 99999999999999754 57 78877421 12211 124567888888888
Q ss_pred hcC
Q 012893 411 LSS 413 (454)
Q Consensus 411 l~~ 413 (454)
+++
T Consensus 169 l~g 171 (388)
T 3afo_A 169 ISS 171 (388)
T ss_dssp HTT
T ss_pred hcC
Confidence 865
No 94
>3av3_A Phosphoribosylglycinamide formyltransferase; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; HET: MSE; 1.70A {Geobacillus kaustophilus}
Probab=50.06 E-value=1.2e+02 Score=25.78 Aligned_cols=103 Identities=10% Similarity=0.178 Sum_probs=57.0
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHhhhcC--CCcEEEEEEeCCCcCc----cccccccccCCCCeeEEeCCC-CCCCCC
Q 012893 10 RRHVAVLAFPFGTHAAPLLDLVRRLSEAAL--EEEVTFSFFSTAQSNG----SLFMEKDELRDCKIVPYNVES-GLPEGF 82 (454)
Q Consensus 10 ~~~il~~~~~~~GH~~p~l~la~~L~~~~~--G~~h~V~~~~~~~~~~----~~~~~~~~~~~~~~~~~~i~~-~~~~~~ 82 (454)
|+||.++.+++..- +.++.++| .+. + |+|..+.+..... ..++. |+++..++. .+.
T Consensus 3 m~ki~vl~sG~g~~---~~~~l~~l--~~~~l~--~~I~~Vit~~~~~~v~~~A~~~-------gIp~~~~~~~~~~--- 65 (212)
T 3av3_A 3 MKRLAVFASGSGTN---FQAIVDAA--KRGDLP--ARVALLVCDRPGAKVIERAARE-------NVPAFVFSPKDYP--- 65 (212)
T ss_dssp CEEEEEECCSSCHH---HHHHHHHH--HTTCCC--EEEEEEEESSTTCHHHHHHHHT-------TCCEEECCGGGSS---
T ss_pred CcEEEEEEECCcHH---HHHHHHHH--HhCCCC--CeEEEEEeCCCCcHHHHHHHHc-------CCCEEEeCccccc---
Confidence 56888887776543 55666778 555 8 8998776643222 22333 777776531 110
Q ss_pred CCCCCCcchHHHHHHhchHHHHHHHHHHHHhcCCCccEEEEcCch-hhHHHHHHHcCCCeEEEeCc
Q 012893 83 RFTGNPREPVEHFLKATPGNFVRALEKAVAKTGLEISCLITDAFL-WFAAEMAEEMRVPWIAYWTA 147 (454)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pD~vi~d~~~-~~~~~~A~~lgiP~v~~~~~ 147 (454)
. ...+.+.+.+.++.. +||++|.-.+. .....+-+.....++-++++
T Consensus 66 --------~--------~~~~~~~~~~~l~~~--~~Dliv~a~y~~il~~~~l~~~~~~~iNiHpS 113 (212)
T 3av3_A 66 --------S--------KAAFESEILRELKGR--QIDWIALAGYMRLIGPTLLSAYEGKIVNIHPS 113 (212)
T ss_dssp --------S--------HHHHHHHHHHHHHHT--TCCEEEESSCCSCCCHHHHHHTTTCEEEEESS
T ss_pred --------c--------hhhhHHHHHHHHHhc--CCCEEEEchhhhhCCHHHHhhhcCCEEEEecC
Confidence 0 111222233344554 99998866432 33334455666677777654
No 95
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=49.23 E-value=34 Score=35.44 Aligned_cols=108 Identities=9% Similarity=-0.041 Sum_probs=74.1
Q ss_pred eccChHhhhcccCcceEEecCCchhHHHHHHcCCCeeccccccchhHHHHHHHHhhceeecCcCC-------CCCHHHHH
Q 012893 332 PWAPQLKILEHSSVCVFVTHCGWNSTIEGITGGVPMVCRPVFADQALNQRIIETAWGIGVGVXGE-------KFTKDETV 404 (454)
Q Consensus 332 ~~vp~~~ll~~~~~~~~I~HgG~gsv~eal~~GvP~i~~P~~~DQ~~nA~~v~~~~G~G~~~~~~-------~~~~~~l~ 404 (454)
++.+-..+|..++ ++||=- ...+.|.+..++|+|......|++.. . --|...+.. ..+.++|.
T Consensus 605 ~~~di~~ll~~aD--~lITDy-SSv~fD~~~l~kPiif~~~D~~~Y~~-----~--~rg~y~d~~~~~pg~~~~~~~eL~ 674 (729)
T 3l7i_A 605 NYNDVSELFLISD--CLITDY-SSVMFDYGILKRPQFFFAYDIDKYDK-----G--LRGFYMNYMEDLPGPIYTEPYGLA 674 (729)
T ss_dssp TCSCHHHHHHTCS--EEEESS-CTHHHHHGGGCCCEEEECTTTTTTTS-----S--CCSBSSCTTSSSSSCEESSHHHHH
T ss_pred CCcCHHHHHHHhC--EEEeec-hHHHHhHHhhCCCEEEecCCHHHHhh-----c--cCCcccChhHhCCCCeECCHHHHH
Confidence 4566778887777 999874 46889999999999988776666533 1 134444322 13678898
Q ss_pred HHHHHHhcCchHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHh
Q 012893 405 NALKQVLSSEEGKRMRENVGALKKLAFKAVESDGSSTKNFKALVEVVN 452 (454)
Q Consensus 405 ~av~~vl~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 452 (454)
++|.+...++ ..|+++.+++.+++-.. ..|.+|++-++.+++...
T Consensus 675 ~~i~~~~~~~--~~~~~~~~~~~~~~~~~-~dg~as~ri~~~i~~~~~ 719 (729)
T 3l7i_A 675 KELKNLDKVQ--QQYQEKIDAFYDRFCSV-DNGKASQYIGDLIHKDIK 719 (729)
T ss_dssp HHHTTHHHHH--HHTHHHHHHHHHHHSTT-CCSCHHHHHHHHHHHHHH
T ss_pred HHHhhhhccc--hhHHHHHHHHHHHhCCc-cCChHHHHHHHHHHhcCc
Confidence 8888876532 36788877787777643 446677777777666544
No 96
>1rcu_A Conserved hypothetical protein VT76; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.50A {Thermotoga maritima} SCOP: c.129.1.1
Probab=49.05 E-value=82 Score=26.45 Aligned_cols=93 Identities=11% Similarity=0.020 Sum_probs=52.4
Q ss_pred cchhccCCCCcEEEEeeCCCCCCCHHHHHHHHHHHHhcCCCEEEEEcCCcccccchhhhhhhCCCceEe--eccC-hH-h
Q 012893 263 LPWLNEHENASVIYISFGSMITPPRAEVIALAEALEAIGFPFLWSFRGNAEEQLPKGFLERTKSYGKVV--PWAP-QL-K 338 (454)
Q Consensus 263 ~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~~~~~~nv~v~--~~vp-~~-~ 338 (454)
-.+|.+.+ ...|+.|.. .......++..+.+-++|-+++.... ...+ ....+. ...+ -+ .
T Consensus 51 g~~LA~~G---~~vVsGg~~-----GiM~aa~~gAl~~GG~~iGVlP~e~~---~~~~-----~~~~~~~~~~f~~Rk~~ 114 (195)
T 1rcu_A 51 GRTLAKKG---YLVFNGGRD-----GVMELVSQGVREAGGTVVGILPDEEA---GNPY-----LSVAVKTGLDFQMRSFV 114 (195)
T ss_dssp HHHHHHTT---CEEEECCSS-----HHHHHHHHHHHHTTCCEEEEESTTCC---CCTT-----CSEEEECCCCHHHHHHH
T ss_pred HHHHHHCC---CEEEeCCHH-----HHHHHHHHHHHHcCCcEEEEeCCccc---CCCC-----cceeeecCCCHHHHHHH
Confidence 33454432 455554433 45666667666666666666654211 1110 223333 2334 23 4
Q ss_pred hhcccCcceEEecCCchhHHH---HHHcCCCeecccc
Q 012893 339 ILEHSSVCVFVTHCGWNSTIE---GITGGVPMVCRPV 372 (454)
Q Consensus 339 ll~~~~~~~~I~HgG~gsv~e---al~~GvP~i~~P~ 372 (454)
+...++ .+++--||.||.-| ++.+|+|+++++.
T Consensus 115 m~~~sd-a~IvlpGG~GTL~E~~eal~~~kPV~lln~ 150 (195)
T 1rcu_A 115 LLRNAD-VVVSIGGEIGTAIEILGAYALGKPVILLRG 150 (195)
T ss_dssp HHTTCS-EEEEESCCHHHHHHHHHHHHTTCCEEEETT
T ss_pred HHHhCC-EEEEecCCCcHHHHHHHHHhcCCCEEEECC
Confidence 444555 57788899998765 5779999999963
No 97
>1g63_A Epidermin modifying enzyme EPID; alpha, beta protein, rossmann like fold, oxidoreductase; HET: FMN; 2.50A {Staphylococcus epidermidis} SCOP: c.34.1.1 PDB: 1g5q_A*
Probab=46.94 E-value=14 Score=30.78 Aligned_cols=45 Identities=7% Similarity=-0.044 Sum_probs=37.0
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHhhhcCCCcEEEEEEeCCCcCcccccc
Q 012893 11 RHVAVLAFPFGTHAAPLLDLVRRLSEAALEEEVTFSFFSTAQSNGSLFME 60 (454)
Q Consensus 11 ~~il~~~~~~~GH~~p~l~la~~L~~~~~G~~h~V~~~~~~~~~~~~~~~ 60 (454)
.||++...|+.|=+ =...+.+.| +++| ++|.++.++...+++...
T Consensus 3 k~IllgvTGs~aa~-k~~~l~~~L--~~~g--~~V~vv~T~~A~~fi~~~ 47 (181)
T 1g63_A 3 GKLLICATASINVI-NINHYIVEL--KQHF--DEVNILFSPSSKNFINTD 47 (181)
T ss_dssp CCEEEEECSCGGGG-GHHHHHHHH--TTTS--SCEEEEECGGGGGTSCGG
T ss_pred CEEEEEEECHHHHH-HHHHHHHHH--HHCC--CEEEEEEchhHHHHHHHH
Confidence 47888888888777 678999999 8899 999999998776665443
No 98
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=46.65 E-value=19 Score=30.66 Aligned_cols=44 Identities=9% Similarity=-0.084 Sum_probs=38.2
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHhhhcCCCcEEEEEEeCCCcCc
Q 012893 8 TQRRHVAVLAFPFGTHAAPLLDLVRRLSEAALEEEVTFSFFSTAQSNG 55 (454)
Q Consensus 8 ~~~~~il~~~~~~~GH~~p~l~la~~L~~~~~G~~h~V~~~~~~~~~~ 55 (454)
.++.+||+.+.++-.|-....-++..| .++| ++|.+++.....+
T Consensus 86 ~~~~~vll~~~~gd~H~iG~~~va~~l--~~~G--~~v~~LG~~vp~~ 129 (210)
T 1y80_A 86 PSVGKIVLGTVKGDLHDIGKNLVAMML--ESGG--FTVYNLGVDIEPG 129 (210)
T ss_dssp CCCCEEEEEEBTTCCCCHHHHHHHHHH--HHTT--CEEEECCSSBCHH
T ss_pred CCCCEEEEEeCCCcccHHHHHHHHHHH--HHCC--CEEEECCCCCCHH
Confidence 346799999999999999999999999 9999 9999988754444
No 99
>3ty2_A 5'-nucleotidase SURE; surviVal protein, phosphatase, hydrolase; HET: MSE; 1.89A {Coxiella burnetii} SCOP: c.106.1.0
Probab=45.71 E-value=25 Score=31.11 Aligned_cols=43 Identities=14% Similarity=-0.003 Sum_probs=31.0
Q ss_pred CCCCcEEEEEcCCCccCHHHHHHHHHHHhhhcCCCcEEEEEEeCCCcCc
Q 012893 7 STQRRHVAVLAFPFGTHAAPLLDLVRRLSEAALEEEVTFSFFSTAQSNG 55 (454)
Q Consensus 7 ~~~~~~il~~~~~~~GH~~p~l~la~~L~~~~~G~~h~V~~~~~~~~~~ 55 (454)
.+++||||+.-=-+. |.--..+|+++| ++ + |+|+++.+...+.
T Consensus 8 ~~~~m~ILlTNDDGi-~apGi~aL~~~l--~~-~--~~V~VVAP~~~~S 50 (261)
T 3ty2_A 8 ATPKLRLLLSNDDGV-YAKGLAILAKTL--AD-L--GEVDVVAPDRNRS 50 (261)
T ss_dssp ---CCEEEEECSSCT-TCHHHHHHHHHH--TT-T--SEEEEEEESSCCT
T ss_pred cCCCCeEEEEcCCCC-CCHHHHHHHHHH--Hh-c--CCEEEEecCCCCc
Confidence 356799988876555 555577889999 66 8 8999999976554
No 100
>4e5s_A MCCFLIKE protein (BA_5613); structural genomics, center for structural genomi infectious diseases, csgid, serine peptidase S66; 1.95A {Bacillus anthracis}
Probab=45.54 E-value=32 Score=31.79 Aligned_cols=72 Identities=15% Similarity=0.116 Sum_probs=54.5
Q ss_pred CHHHHHHHHHHHHhcCCCEEEEEcCCcccccchhhhhhhCCCceEeeccChHhhhcccCcceEEecCCchhHHHHHH--c
Q 012893 286 PRAEVIALAEALEAIGFPFLWSFRGNAEEQLPKGFLERTKSYGKVVPWAPQLKILEHSSVCVFVTHCGWNSTIEGIT--G 363 (454)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~~~~~~nv~v~~~vp~~~ll~~~~~~~~I~HgG~gsv~eal~--~ 363 (454)
+......+.+++.+...+.||.+.+.. +-.++.++++...+-+++. .||-.+-..+++-+++ .
T Consensus 63 d~~Ra~dL~~a~~Dp~i~aI~~~rGG~-------------g~~rlL~~lD~~~i~~~PK--~~~GySDiTaL~~al~~~~ 127 (331)
T 4e5s_A 63 ISSRVQDLHEAFRDPNVKAILTTLGGY-------------NSNGLLKYLDYDLIRENPK--FFCGYSDITALNNAIYTKT 127 (331)
T ss_dssp HHHHHHHHHHHHHCTTEEEEEESCCCS-------------CGGGGGGGCCHHHHHTSCC--EEEECGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhCCCCCEEEEccccc-------------cHHHHHhhcChhHHHhCCe--EEEEecchHHHHHHHHHhh
Confidence 456778899999999999999988764 2234566777777766676 8888888888888877 4
Q ss_pred CCCeecccc
Q 012893 364 GVPMVCRPV 372 (454)
Q Consensus 364 GvP~i~~P~ 372 (454)
|+..+.-|+
T Consensus 128 G~~t~hGp~ 136 (331)
T 4e5s_A 128 GLVTYSGPH 136 (331)
T ss_dssp CBCEEECCC
T ss_pred CCcEEEccc
Confidence 777776665
No 101
>2i2x_B MTAC, methyltransferase 1; TIM barrel and helix bundle (MTAB), rossman fold and helix B (MTAC); HET: B13; 2.50A {Methanosarcina barkeri}
Probab=45.48 E-value=24 Score=31.20 Aligned_cols=44 Identities=9% Similarity=-0.115 Sum_probs=38.4
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHhhhcCCCcEEEEEEeCCCcCc
Q 012893 8 TQRRHVAVLAFPFGTHAAPLLDLVRRLSEAALEEEVTFSFFSTAQSNG 55 (454)
Q Consensus 8 ~~~~~il~~~~~~~GH~~p~l~la~~L~~~~~G~~h~V~~~~~~~~~~ 55 (454)
.++.+||+.+.++-.|-....-++..| .++| ++|.+++.....+
T Consensus 121 ~~~~~vlla~~~gd~HdiG~~iva~~L--~~~G--~~Vi~LG~~vp~e 164 (258)
T 2i2x_B 121 KTKGTVVCHVAEGDVHDIGKNIVTALL--RANG--YNVVDLGRDVPAE 164 (258)
T ss_dssp CCSCEEEEEECTTCCCCHHHHHHHHHH--HHTT--CEEEEEEEECCSH
T ss_pred CCCCeEEEEeCCCCccHHHHHHHHHHH--HHCC--CEEEECCCCCCHH
Confidence 457899999999999999999999999 9999 9999888654444
No 102
>3pdi_B Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=44.96 E-value=65 Score=31.18 Aligned_cols=33 Identities=21% Similarity=0.236 Sum_probs=25.3
Q ss_pred HHHHHhcCCCccEEEEcCchhhHHHHHHHcCCCeEEEe
Q 012893 108 EKAVAKTGLEISCLITDAFLWFAAEMAEEMRVPWIAYW 145 (454)
Q Consensus 108 ~~~~~~~~~~pD~vi~d~~~~~~~~~A~~lgiP~v~~~ 145 (454)
+++++.. +||++|.+.. ...+|+++|||++.+.
T Consensus 368 e~~i~~~--~pDllig~~~---~~~~a~k~gip~~~~g 400 (458)
T 3pdi_B 368 EHAARAG--QAQLVIGNSH---ALASARRLGVPLLRAG 400 (458)
T ss_dssp HHHHHHH--TCSEEEECTT---HHHHHHHTTCCEEECS
T ss_pred HHHHHhc--CCCEEEEChh---HHHHHHHcCCCEEEec
Confidence 3444444 9999999855 4579999999999863
No 103
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=41.82 E-value=18 Score=33.60 Aligned_cols=100 Identities=13% Similarity=0.050 Sum_probs=56.0
Q ss_pred CcEEEEEcCCCcc--C--HHHHHHHHHHHhhhcCCCcEEEEEEeCCCcCccccccccccCCCCeeEEeCCCCCCCCCCCC
Q 012893 10 RRHVAVLAFPFGT--H--AAPLLDLVRRLSEAALEEEVTFSFFSTAQSNGSLFMEKDELRDCKIVPYNVESGLPEGFRFT 85 (454)
Q Consensus 10 ~~~il~~~~~~~G--H--~~p~l~la~~L~~~~~G~~h~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 85 (454)
+.-|++.|..+.. . ..-+..|++.| .++| ++|.+++++...+..++..... +-+...+
T Consensus 185 ~~~i~i~pga~~~~k~wp~~~~~~l~~~l--~~~g--~~vvl~g~~~e~~~~~~i~~~~---~~~~~~l----------- 246 (349)
T 3tov_A 185 DILIGFNIGSAVPEKRWPAERFAHVADYF--GRLG--YKTVFFGGPMDLEMVQPVVEQM---ETKPIVA----------- 246 (349)
T ss_dssp CCEEEEECCCSSGGGCCCHHHHHHHHHHH--HHHT--CEEEECCCTTTHHHHHHHHHTC---SSCCEEC-----------
T ss_pred CCEEEEeCCCCCccCCCCHHHHHHHHHHH--HhCC--CeEEEEeCcchHHHHHHHHHhc---ccccEEe-----------
Confidence 3456666665432 1 45688999999 7679 9999877765444333220000 0000111
Q ss_pred CCCcchHHHHHHhchHHHHHHHHHHHHhcCCCccEEEEcCchhhHHHHHHHcCCCeEEEeC
Q 012893 86 GNPREPVEHFLKATPGNFVRALEKAVAKTGLEISCLITDAFLWFAAEMAEEMRVPWIAYWT 146 (454)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pD~vi~d~~~~~~~~~A~~lgiP~v~~~~ 146 (454)
.. ...+.+ +..+++ ..|++|+. ..+...+|..+|+|+|.++.
T Consensus 247 ---~g---------~~sl~e-~~ali~----~a~~~i~~--DsG~~HlAaa~g~P~v~lfg 288 (349)
T 3tov_A 247 ---TG---------KFQLGP-LAAAMN----RCNLLITN--DSGPMHVGISQGVPIVALYG 288 (349)
T ss_dssp ---TT---------CCCHHH-HHHHHH----TCSEEEEE--SSHHHHHHHTTTCCEEEECS
T ss_pred ---eC---------CCCHHH-HHHHHH----hCCEEEEC--CCCHHHHHHhcCCCEEEEEC
Confidence 00 011122 233444 55999875 23455789999999999864
No 104
>3fgn_A Dethiobiotin synthetase; biotin biosynthesis, BIOD, ATP-BIND ligase, magnesium, nucleotide-binding; 1.85A {Mycobacterium tuberculosis} PDB: 3fmf_A* 3fmi_A* 3fpa_A*
Probab=41.42 E-value=57 Score=28.65 Aligned_cols=37 Identities=5% Similarity=-0.076 Sum_probs=29.1
Q ss_pred CCcEEEEEcC--CCccCHHHHHHHHHHHhhhcCCCcEEEEEEe
Q 012893 9 QRRHVAVLAF--PFGTHAAPLLDLVRRLSEAALEEEVTFSFFS 49 (454)
Q Consensus 9 ~~~~il~~~~--~~~GH~~p~l~la~~L~~~~~G~~h~V~~~~ 49 (454)
++|+.+|++. ..-|=..=.+.|+++| +++| ++|.++=
T Consensus 24 ~~m~~i~Itgt~t~vGKT~vt~gL~~~l--~~~G--~~V~~fK 62 (251)
T 3fgn_A 24 SHMTILVVTGTGTGVGKTVVCAALASAA--RQAG--IDVAVCK 62 (251)
T ss_dssp SSCEEEEEEESSTTSCHHHHHHHHHHHH--HHTT--CCEEEEE
T ss_pred cCCCEEEEEeCCCCCcHHHHHHHHHHHH--HHCC--CeEEEEe
Confidence 3455555554 3788899999999999 9999 9999874
No 105
>3mcu_A Dipicolinate synthase, B chain; NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Bacillus cereus}
Probab=41.26 E-value=21 Score=30.45 Aligned_cols=43 Identities=5% Similarity=-0.041 Sum_probs=32.1
Q ss_pred CCcEEEEEcCCCccCHHH-HHHHHHHHhhhcCCCcEEEEEEeCCCcCcc
Q 012893 9 QRRHVAVLAFPFGTHAAP-LLDLVRRLSEAALEEEVTFSFFSTAQSNGS 56 (454)
Q Consensus 9 ~~~~il~~~~~~~GH~~p-~l~la~~L~~~~~G~~h~V~~~~~~~~~~~ 56 (454)
+..||++...|+. ..+- .+.+.+.| ++.| ++|.++.++.....
T Consensus 4 ~~k~IllgiTGsi-aayk~~~~ll~~L--~~~g--~eV~vv~T~~A~~v 47 (207)
T 3mcu_A 4 KGKRIGFGFTGSH-CTYEEVMPHLEKL--IAEG--AEVRPVVSYTVQST 47 (207)
T ss_dssp TTCEEEEEECSCG-GGGTTSHHHHHHH--HHTT--CEEEEEECC-----
T ss_pred CCCEEEEEEEChH-HHHHHHHHHHHHH--HhCC--CEEEEEEehHHHHH
Confidence 3468999888874 5665 89999999 8999 99999999765533
No 106
>3ezx_A MMCP 1, monomethylamine corrinoid protein 1; N terminal all helical bundle C terminal rossmann fold, cobalt, metal-binding; HET: HCB; 2.56A {Methanosarcina barkeri}
Probab=40.31 E-value=29 Score=29.74 Aligned_cols=46 Identities=9% Similarity=-0.087 Sum_probs=38.3
Q ss_pred CCCCcEEEEEcCCCccCHHHHHHHHHHHhhhcCCCcEEEEEEeCCCcCcc
Q 012893 7 STQRRHVAVLAFPFGTHAAPLLDLVRRLSEAALEEEVTFSFFSTAQSNGS 56 (454)
Q Consensus 7 ~~~~~~il~~~~~~~GH~~p~l~la~~L~~~~~G~~h~V~~~~~~~~~~~ 56 (454)
..++.|||+.+.++-.|-....-++..| +.+| ++|..++.....+.
T Consensus 89 ~~~~~~vll~~v~gd~HdiG~~iv~~~l--~~~G--~~Vi~LG~~vp~e~ 134 (215)
T 3ezx_A 89 GEEAGLAITFVAEGDIHDIGHRLVTTML--GANG--FQIVDLGVDVLNEN 134 (215)
T ss_dssp ---CCEEEEEECTTCCCCHHHHHHHHHH--HHTS--CEEEECCSSCCHHH
T ss_pred CCCCCeEEEEeCCCChhHHHHHHHHHHH--HHCC--CeEEEcCCCCCHHH
Confidence 3457899999999999999999999999 9999 99999987554443
No 107
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=40.22 E-value=29 Score=29.25 Aligned_cols=41 Identities=7% Similarity=0.007 Sum_probs=30.1
Q ss_pred HHHHHHHHHHHhcCCCccEEEEcCchhhHHHHHHHcCCCeEEEeCch
Q 012893 102 NFVRALEKAVAKTGLEISCLITDAFLWFAAEMAEEMRVPWIAYWTAG 148 (454)
Q Consensus 102 ~~~~~~~~~~~~~~~~pD~vi~d~~~~~~~~~A~~lgiP~v~~~~~~ 148 (454)
...+.++++.+ .+.|+||.|.. +..+|+++|+|.+.+.++.
T Consensus 130 e~~~~i~~l~~---~G~~vvVG~~~---~~~~A~~~Gl~~vli~sg~ 170 (196)
T 2q5c_A 130 EITTLISKVKT---ENIKIVVSGKT---VTDEAIKQGLYGETINSGE 170 (196)
T ss_dssp GHHHHHHHHHH---TTCCEEEECHH---HHHHHHHTTCEEEECCCCH
T ss_pred HHHHHHHHHHH---CCCeEEECCHH---HHHHHHHcCCcEEEEecCH
Confidence 34555555444 38999999954 4689999999999987643
No 108
>1kjn_A MTH0777; hypotethical protein, structural genomics, PSI, protein structure initiative; 2.20A {Methanothermobacterthermautotrophicus} SCOP: c.115.1.1
Probab=40.21 E-value=30 Score=27.60 Aligned_cols=47 Identities=4% Similarity=-0.041 Sum_probs=36.2
Q ss_pred CcEEEEEcC-C-CccCHHHHHHHHHHHhhhcCCCcEEEEEEeCCCcCcccccc
Q 012893 10 RRHVAVLAF-P-FGTHAAPLLDLVRRLSEAALEEEVTFSFFSTAQSNGSLFME 60 (454)
Q Consensus 10 ~~~il~~~~-~-~~GH~~p~l~la~~L~~~~~G~~h~V~~~~~~~~~~~~~~~ 60 (454)
.||+|++-. | ..-.+.-++=++..| +++| |+|++.+.+.....++-+
T Consensus 6 ~m~~LilLGCPE~Pvq~p~~lYl~~~L--k~~G--~~v~VA~npAAlkLleva 54 (157)
T 1kjn_A 6 TGKALMVLGCPESPVQIPLAIYTSHKL--KKKG--FRVTVTANPAALRLVQVA 54 (157)
T ss_dssp CCEEEEECCCSCSTTHHHHHHHHHHHH--HHTT--CEEEEEECHHHHHHHHHH
T ss_pred ceeeeEEecCCCCcchhhHHHHHHHHH--HhcC--CeeEEecCHHHHhheecc
Confidence 467766654 4 667777788899999 9999 999999998766655544
No 109
>2a33_A Hypothetical protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT2G37210; 1.95A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4o_A
Probab=40.19 E-value=86 Score=26.79 Aligned_cols=43 Identities=19% Similarity=0.160 Sum_probs=28.9
Q ss_pred eEeeccCh-Hh-hhcccCcceEEecCCchhHHHHHH---------cCCCeecccc
Q 012893 329 KVVPWAPQ-LK-ILEHSSVCVFVTHCGWNSTIEGIT---------GGVPMVCRPV 372 (454)
Q Consensus 329 ~v~~~vp~-~~-ll~~~~~~~~I~HgG~gsv~eal~---------~GvP~i~~P~ 372 (454)
.+....+. +. +...++ .+++--||.||.-|... +++|++++-.
T Consensus 94 ~~~~~f~~Rk~~~~~~sd-a~VvlpGG~GTLdElfE~lt~~qlg~~~kPvvll~~ 147 (215)
T 2a33_A 94 RAVADMHQRKAEMAKHSD-AFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNV 147 (215)
T ss_dssp EEESSHHHHHHHHHHTCS-EEEECSCCHHHHHHHHHHHHHHHTTSCCCCEEEECG
T ss_pred eecCCHHHHHHHHHHhCC-EEEEeCCCCchHHHHHHHHHHHHhCCCCCCeEEecC
Confidence 34444553 33 344454 67888999999988762 4899998764
No 110
>1mvl_A PPC decarboxylase athal3A; flavoprotein, active site mutant C175S; HET: FMN; 2.00A {Arabidopsis thaliana} SCOP: c.34.1.1 PDB: 1mvn_A* 1e20_A*
Probab=38.90 E-value=40 Score=28.77 Aligned_cols=46 Identities=13% Similarity=-0.066 Sum_probs=37.3
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHhhhcCCCcEEEEEEeCCCcCcccccc
Q 012893 9 QRRHVAVLAFPFGTHAAPLLDLVRRLSEAALEEEVTFSFFSTAQSNGSLFME 60 (454)
Q Consensus 9 ~~~~il~~~~~~~GH~~p~l~la~~L~~~~~G~~h~V~~~~~~~~~~~~~~~ 60 (454)
++.||++...++.+-+. ...|.+.| ++.| +|.++.++...+++...
T Consensus 18 ~~k~IllgvTGsiaa~k-~~~ll~~L--~~~g---~V~vv~T~~A~~fv~~~ 63 (209)
T 1mvl_A 18 RKPRVLLAASGSVAAIK-FGNLCHCF--TEWA---EVRAVVTKSSLHFLDKL 63 (209)
T ss_dssp -CCEEEEEECSSGGGGG-HHHHHHHH--HTTS---EEEEEECTGGGGTCCGG
T ss_pred CCCEEEEEEeCcHHHHH-HHHHHHHH--hcCC---CEEEEEcchHHHhcCHH
Confidence 35799999999998776 89999999 8777 89988898776666544
No 111
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=38.40 E-value=91 Score=29.01 Aligned_cols=38 Identities=8% Similarity=0.072 Sum_probs=26.4
Q ss_pred cEEEEEcC--C-CccCHHHHHHHHHHHhhhcCCCcEEEEEEeCCCc
Q 012893 11 RHVAVLAF--P-FGTHAAPLLDLVRRLSEAALEEEVTFSFFSTAQS 53 (454)
Q Consensus 11 ~~il~~~~--~-~~GH~~p~l~la~~L~~~~~G~~h~V~~~~~~~~ 53 (454)
|||++++. | ..|--.-+..|+++| .+ - |+|++++....
T Consensus 1 MkI~~v~~~~p~~gG~~~~~~~l~~~L--~~-~--~~V~v~~~~~~ 41 (413)
T 3oy2_A 1 MKLIIVGAHSSVPSGYGRVMRAIVPRI--SK-A--HEVIVFGIHAF 41 (413)
T ss_dssp CEEEEEEECTTCCSHHHHHHHHHHHHH--TT-T--SEEEEEEESCC
T ss_pred CeEEEecCCCCCCCCHHHHHHHHHHHH--Hh-c--CCeEEEeecCC
Confidence 68877752 3 456566678899999 54 3 78888876443
No 112
>4h1h_A LMO1638 protein; MCCF-like, csgid, MCCF homolog, structural genomics, niaid, institute of allergy and infectious diseases; 2.46A {Listeria monocytogenes}
Probab=38.27 E-value=46 Score=30.60 Aligned_cols=71 Identities=13% Similarity=0.149 Sum_probs=50.4
Q ss_pred CHHHHHHHHHHHHhcCCCEEEEEcCCcccccchhhhhhhCCCceEeeccChHhhhcccCcceEEecCCchhHHHHHH--c
Q 012893 286 PRAEVIALAEALEAIGFPFLWSFRGNAEEQLPKGFLERTKSYGKVVPWAPQLKILEHSSVCVFVTHCGWNSTIEGIT--G 363 (454)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~~~~~~nv~v~~~vp~~~ll~~~~~~~~I~HgG~gsv~eal~--~ 363 (454)
+......+.+++.+...+.||.+.+.. +-.++.++++...+-.++. .||-.+-..+++-+++ .
T Consensus 63 d~~Ra~dL~~a~~Dp~i~aI~~~rGG~-------------g~~rlL~~LD~~~i~~~PK--~~~GySDiT~L~~al~~~~ 127 (327)
T 4h1h_A 63 IRSRVADIHEAFNDSSVKAILTVIGGF-------------NSNQLLPYLDYDLISENPK--ILCGFSDITALATAIYTQT 127 (327)
T ss_dssp HHHHHHHHHHHHHCTTEEEEEESCCCS-------------CGGGGGGGCCHHHHHHSCC--EEEECTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhCCCCCEEEEcCCch-------------hHHHHhhhcchhhhccCCe--EEEecccccHHHHHHHHhc
Confidence 456778899999999999999987754 2234566777777777776 8887777777777775 3
Q ss_pred CCCeeccc
Q 012893 364 GVPMVCRP 371 (454)
Q Consensus 364 GvP~i~~P 371 (454)
|...+.-|
T Consensus 128 g~~t~hGp 135 (327)
T 4h1h_A 128 ELITYSGA 135 (327)
T ss_dssp CBCEEECC
T ss_pred CeEEEeCc
Confidence 55444444
No 113
>1o97_C Electron transferring flavoprotein beta-subunit; FAD binding; HET: AMP FAD; 1.6A {Methylophilus methylotrophus} SCOP: c.26.2.3 PDB: 1o95_C* 1o96_A* 1o94_C* 3clr_C* 3cls_C* 3clt_C* 3clu_C*
Probab=37.91 E-value=49 Score=29.40 Aligned_cols=41 Identities=15% Similarity=0.101 Sum_probs=30.0
Q ss_pred HHHHHHHHhcCCCccEEEEcCchh------hHHHHHHHcCCCeEEEeCc
Q 012893 105 RALEKAVAKTGLEISCLITDAFLW------FAAEMAEEMRVPWIAYWTA 147 (454)
Q Consensus 105 ~~~~~~~~~~~~~pD~vi~d~~~~------~~~~~A~~lgiP~v~~~~~ 147 (454)
..+.++++.. +||+|++...+. .+..+|..||+|+++..+.
T Consensus 102 ~~La~~i~~~--~~dlVl~G~~s~d~~~~~v~p~lA~~L~~~~vt~v~~ 148 (264)
T 1o97_C 102 RILTEVIKKE--APDMVFAGVQSSDQAYASTGISVASYLNWPHAAVVAD 148 (264)
T ss_dssp HHHHHHHHHH--CCSEEEEESCCTTTCCCCHHHHHHHHHTCCEEEEEEE
T ss_pred HHHHHHHHhc--CCCEEEEcCCccCCchhhHHHHHHHHhCCCcccceEE
Confidence 3444455544 899999885442 6779999999999998653
No 114
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=37.43 E-value=1.5e+02 Score=25.45 Aligned_cols=143 Identities=8% Similarity=-0.016 Sum_probs=72.1
Q ss_pred CCCcEEEEeeCCCCCCCHHHHHHHHHHHHhcCCCEEEEEcCCcccccchhhhhhh-CCCceEeeccChHhhhcccCcceE
Q 012893 270 ENASVIYISFGSMITPPRAEVIALAEALEAIGFPFLWSFRGNAEEQLPKGFLERT-KSYGKVVPWAPQLKILEHSSVCVF 348 (454)
Q Consensus 270 ~~~~~v~vs~Gs~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~~~~-~~nv~v~~~vp~~~ll~~~~~~~~ 348 (454)
.+++++.|+.|.++ ...+..+.+.|..+.++.+... +.+.+.. ..++.+....-....|..++ ++
T Consensus 30 ~gk~VLVVGgG~va-------~~ka~~Ll~~GA~VtVvap~~~-----~~l~~l~~~~~i~~i~~~~~~~dL~~ad--LV 95 (223)
T 3dfz_A 30 KGRSVLVVGGGTIA-------TRRIKGFLQEGAAITVVAPTVS-----AEINEWEAKGQLRVKRKKVGEEDLLNVF--FI 95 (223)
T ss_dssp TTCCEEEECCSHHH-------HHHHHHHGGGCCCEEEECSSCC-----HHHHHHHHTTSCEEECSCCCGGGSSSCS--EE
T ss_pred CCCEEEEECCCHHH-------HHHHHHHHHCCCEEEEECCCCC-----HHHHHHHHcCCcEEEECCCCHhHhCCCC--EE
Confidence 34568888777443 3456677777888887765321 2222111 13455543322344565555 89
Q ss_pred EecCCchhHHHHHH----cCCCeeccccccchhHHHH-----HHHHhhceeecCcCCCCC---HHHHHHHHHHHhcCchH
Q 012893 349 VTHCGWNSTIEGIT----GGVPMVCRPVFADQALNQR-----IIETAWGIGVGVXGEKFT---KDETVNALKQVLSSEEG 416 (454)
Q Consensus 349 I~HgG~gsv~eal~----~GvP~i~~P~~~DQ~~nA~-----~v~~~~G~G~~~~~~~~~---~~~l~~av~~vl~~~~~ 416 (454)
|.--|.-.+.+.++ .|+|+-+ .|.+..+. .+.+- ++-+.+..+..+ +..|.+.|.+.+.. .-
T Consensus 96 IaAT~d~~~N~~I~~~ak~gi~VNv----vD~p~~~~f~~Paiv~rg-~l~iaIST~G~sP~la~~iR~~ie~~lp~-~~ 169 (223)
T 3dfz_A 96 VVATNDQAVNKFVKQHIKNDQLVNM----ASSFSDGNIQIPAQFSRG-RLSLAISTDGASPLLTKRIKEDLSSNYDE-SY 169 (223)
T ss_dssp EECCCCTHHHHHHHHHSCTTCEEEC---------CCSEECCEEEEET-TEEEEEECTTSCHHHHHHHHHHHHHHSCT-HH
T ss_pred EECCCCHHHHHHHHHHHhCCCEEEE----eCCcccCeEEEeeEEEeC-CEEEEEECCCCCcHHHHHHHHHHHHHccH-HH
Confidence 98888766655544 4555422 23322221 11122 233333322223 35666666666643 12
Q ss_pred HHHHHHHHHHHHHHHH
Q 012893 417 KRMRENVGALKKLAFK 432 (454)
Q Consensus 417 ~~~~~~a~~l~~~~~~ 432 (454)
..+-+.+.++++++++
T Consensus 170 ~~~~~~~~~~R~~vk~ 185 (223)
T 3dfz_A 170 TQYTQFLYECRVLIHR 185 (223)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 3566667777777665
No 115
>3sr3_A Microcin immunity protein MCCF; csgid, structural genomics, MCCF protein, center for structu genomics of infectious diseases, immune system; 1.50A {Bacillus anthracis} PDB: 3gjz_A 3t5m_A* 3u1b_A* 3tyx_A*
Probab=37.20 E-value=46 Score=30.73 Aligned_cols=72 Identities=13% Similarity=0.220 Sum_probs=55.6
Q ss_pred CHHHHHHHHHHHHhcCCCEEEEEcCCcccccchhhhhhhCCCceEeeccChHhhhcccCcceEEecCCchhHHHHHH--c
Q 012893 286 PRAEVIALAEALEAIGFPFLWSFRGNAEEQLPKGFLERTKSYGKVVPWAPQLKILEHSSVCVFVTHCGWNSTIEGIT--G 363 (454)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~~~~~~nv~v~~~vp~~~ll~~~~~~~~I~HgG~gsv~eal~--~ 363 (454)
+......+.+++.+...+.||.+.+.. +-.++.++++...+-+++. .||-.+-...++-+++ .
T Consensus 64 d~~Ra~dL~~a~~Dp~i~aI~~~rGG~-------------g~~rlL~~lD~~~i~~~PK--~~~GySDiTaL~~al~~~~ 128 (336)
T 3sr3_A 64 IQERAKELNALIRNPNVSCIMSTIGGM-------------NSNSLLPYIDYDAFQNNPK--IMIGYSDATALLLGIYAKT 128 (336)
T ss_dssp HHHHHHHHHHHHHCTTEEEEEESCCCS-------------CGGGGGGGSCHHHHHHSCC--EEEECGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhCCCCCEEEEccccc-------------cHHHHhhhcChhHHhhCCe--EEEEechHHHHHHHHHHhc
Confidence 456778899999999999999988764 2234566777777766776 8998888888888887 5
Q ss_pred CCCeecccc
Q 012893 364 GVPMVCRPV 372 (454)
Q Consensus 364 GvP~i~~P~ 372 (454)
|+.-+.-|+
T Consensus 129 G~~t~hGp~ 137 (336)
T 3sr3_A 129 GIPTFYGPA 137 (336)
T ss_dssp CCCEEECCC
T ss_pred CceEEECCh
Confidence 888877776
No 116
>1o4v_A Phosphoribosylaminoimidazole mutase PURE; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 1.77A {Thermotoga maritima} SCOP: c.23.8.1
Probab=36.51 E-value=1.8e+02 Score=24.01 Aligned_cols=37 Identities=22% Similarity=0.192 Sum_probs=27.0
Q ss_pred CcEEEEeeCCCCCCCHHHHHHHHHHHHhcCCCEEEEEcC
Q 012893 272 ASVIYISFGSMITPPRAEVIALAEALEAIGFPFLWSFRG 310 (454)
Q Consensus 272 ~~~v~vs~Gs~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 310 (454)
-|.|-|-.||.. +....++....++..|..+=+.+-+
T Consensus 13 ~~~V~IimGS~S--D~~v~~~a~~~L~~~Gi~~dv~V~S 49 (183)
T 1o4v_A 13 VPRVGIIMGSDS--DLPVMKQAAEILEEFGIDYEITIVS 49 (183)
T ss_dssp -CEEEEEESCGG--GHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CCeEEEEeccHH--HHHHHHHHHHHHHHcCCCeEEEEEc
Confidence 357777888776 6778888889999888876555444
No 117
>1p3y_1 MRSD protein; flavoprotein, FMN, rossmann fold, HFCD family, oxdidative decarboxylation, cystein, lantibiotics, mersacidin, oxidore; HET: FAD; 2.54A {Bacillus SP} SCOP: c.34.1.1
Probab=35.94 E-value=13 Score=31.45 Aligned_cols=45 Identities=2% Similarity=-0.043 Sum_probs=37.2
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHhhhcCCCcEEEEEEeCCCcCcccc
Q 012893 9 QRRHVAVLAFPFGTHAAPLLDLVRRLSEAALEEEVTFSFFSTAQSNGSLF 58 (454)
Q Consensus 9 ~~~~il~~~~~~~GH~~p~l~la~~L~~~~~G~~h~V~~~~~~~~~~~~~ 58 (454)
+..||++...|+.|=+. ...+.+.| ++.| ++|.++.++...+++.
T Consensus 7 ~~k~IllgvTGs~aa~k-~~~l~~~L--~~~g--~~V~vv~T~~A~~fi~ 51 (194)
T 1p3y_1 7 KDKKLLIGICGSISSVG-ISSYLLYF--KSFF--KEIRVVMTKTAEDLIP 51 (194)
T ss_dssp GGCEEEEEECSCGGGGG-THHHHHHH--TTTS--SEEEEEECHHHHHHSC
T ss_pred CCCEEEEEEECHHHHHH-HHHHHHHH--HHCC--CEEEEEEchhHHHHHH
Confidence 34689999999988886 78999999 8899 9999999976655543
No 118
>3lyh_A Cobalamin (vitamin B12) biosynthesis CBIX protein; structural genomics, joint center for structural genomics, protein structure initiative; HET: MSE; 1.60A {Marinobacter aquaeolei}
Probab=35.71 E-value=90 Score=23.72 Aligned_cols=37 Identities=16% Similarity=0.004 Sum_probs=23.6
Q ss_pred CcEEEEeeCCCCCCCHHHHHHHHHHHHhcCCCEEEEE
Q 012893 272 ASVIYISFGSMITPPRAEVIALAEALEAIGFPFLWSF 308 (454)
Q Consensus 272 ~~~v~vs~Gs~~~~~~~~~~~~~~~~~~~~~~~i~~~ 308 (454)
..+|+|+.||........+..+.+.++.....+.+.+
T Consensus 6 ~alllv~HGS~~~~~~~~~~~l~~~l~~~~~~V~~a~ 42 (126)
T 3lyh_A 6 HQIILLAHGSSDARWCETFEKLAEPTVESIENAAIAY 42 (126)
T ss_dssp EEEEEEECCCSCHHHHHHHHHHHHHHHHHSTTCEEEE
T ss_pred cEEEEEeCCCCCHHHHHHHHHHHHHHHhhcCCEEEEE
Confidence 4699999999753233456677777766544444443
No 119
>3kcq_A Phosphoribosylglycinamide formyltransferase; structural genomics, niaid, seattle structural center for infectious disease, ssgcid; 2.20A {Anaplasma phagocytophilum} SCOP: c.65.1.0
Probab=35.47 E-value=2.1e+02 Score=24.36 Aligned_cols=102 Identities=13% Similarity=0.166 Sum_probs=55.8
Q ss_pred CCCCCcEEEEEcCCCccCHHHHHHHHHHHhhhcC--CCcEEEEEEeCCCcCc----cccccccccCCCCeeEEeCCC-CC
Q 012893 6 GSTQRRHVAVLAFPFGTHAAPLLDLVRRLSEAAL--EEEVTFSFFSTAQSNG----SLFMEKDELRDCKIVPYNVES-GL 78 (454)
Q Consensus 6 ~~~~~~~il~~~~~~~GH~~p~l~la~~L~~~~~--G~~h~V~~~~~~~~~~----~~~~~~~~~~~~~~~~~~i~~-~~ 78 (454)
.+.+++||+++.+++..- +.+|..++ ++. + ++|..+.+..... +.++. |+++..++. .+
T Consensus 4 ~~~~~~ri~vl~SG~gsn---l~all~~~--~~~~~~--~~I~~Vis~~~~a~~l~~A~~~-------gIp~~~~~~~~~ 69 (215)
T 3kcq_A 4 SMKKELRVGVLISGRGSN---LEALAKAF--STEESS--VVISCVISNNAEARGLLIAQSY-------GIPTFVVKRKPL 69 (215)
T ss_dssp ---CCEEEEEEESSCCHH---HHHHHHHT--CCC-CS--EEEEEEEESCTTCTHHHHHHHT-------TCCEEECCBTTB
T ss_pred CCCCCCEEEEEEECCcHH---HHHHHHHH--HcCCCC--cEEEEEEeCCcchHHHHHHHHc-------CCCEEEeCcccC
Confidence 456778998888876544 44555666 433 5 7888777642221 23333 788777641 11
Q ss_pred CCCCCCCCCCcchHHHHHHhchHHHHHHHHHHHHhcCCCccEEEEcCch-hhHHHHHHHcCCCeEEEeCc
Q 012893 79 PEGFRFTGNPREPVEHFLKATPGNFVRALEKAVAKTGLEISCLITDAFL-WFAAEMAEEMRVPWIAYWTA 147 (454)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pD~vi~d~~~-~~~~~~A~~lgiP~v~~~~~ 147 (454)
. . +.+.+.+++. +||++|.-.+. .....+-+...-.++-++++
T Consensus 70 ----------~-~-------------~~~~~~L~~~--~~Dlivlagy~~IL~~~~l~~~~~~~iNiHpS 113 (215)
T 3kcq_A 70 ----------D-I-------------EHISTVLREH--DVDLVCLAGFMSILPEKFVTDWHHKIINIHPS 113 (215)
T ss_dssp ----------C-H-------------HHHHHHHHHT--TCSEEEESSCCSCCCHHHHHHTTTSEEEEESS
T ss_pred ----------C-h-------------HHHHHHHHHh--CCCEEEEeCCceEeCHHHHhhccCCeEEECcc
Confidence 0 0 1223344444 99998866442 33334445566667777654
No 120
>3mc3_A DSRE/DSRF-like family protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.49A {Sulfolobus solfataricus}
Probab=35.23 E-value=36 Score=26.55 Aligned_cols=44 Identities=14% Similarity=0.000 Sum_probs=31.2
Q ss_pred CcEEEEEcC-C--CccCHHHHHHHHHHHhhhcCCCcEEEEEEeCCCcCccc
Q 012893 10 RRHVAVLAF-P--FGTHAAPLLDLVRRLSEAALEEEVTFSFFSTAQSNGSL 57 (454)
Q Consensus 10 ~~~il~~~~-~--~~GH~~p~l~la~~L~~~~~G~~h~V~~~~~~~~~~~~ 57 (454)
+.|++|+.. + +.......+.+|... .+.| |+|+++........+
T Consensus 15 ~~kl~ii~~sgP~~~~~~~~al~lA~~A--~a~g--~eV~vFf~~dGV~~l 61 (134)
T 3mc3_A 15 XXXILIVVTHGPEDLDRTYAPLFMASIS--ASME--YETSVFFMIXGPXLL 61 (134)
T ss_dssp CCEEEEEECCCGGGTHHHHHHHHHHHHH--HHTT--CEEEEEECTTGGGGG
T ss_pred cceEEEEEccCCCCHHHHHHHHHHHHHH--HHCC--CCEEEEEEeCcHHHH
Confidence 345544444 3 567788888999988 7899 999988886554433
No 121
>1z0s_A Probable inorganic polyphosphate/ATP-NAD kinase; ATP-binding, structural genomics, NADP, PSI, protein structure initiative; HET: ATP; 1.70A {Archaeoglobus fulgidus} SCOP: e.52.1.1 PDB: 1z0u_A* 1z0z_A* 1suw_A*
Probab=35.16 E-value=17 Score=32.68 Aligned_cols=26 Identities=12% Similarity=0.054 Sum_probs=21.7
Q ss_pred ceEEecCCchhHHHHHHc--C-CCeeccc
Q 012893 346 CVFVTHCGWNSTIEGITG--G-VPMVCRP 371 (454)
Q Consensus 346 ~~~I~HgG~gsv~eal~~--G-vP~i~~P 371 (454)
+++|+-||=||+..|+.. + +|++.+.
T Consensus 70 DlvIvlGGDGT~L~aa~~~~~~~PilGIN 98 (278)
T 1z0s_A 70 DFIVSVGGDGTILRILQKLKRCPPIFGIN 98 (278)
T ss_dssp SEEEEEECHHHHHHHHTTCSSCCCEEEEE
T ss_pred CEEEEECCCHHHHHHHHHhCCCCcEEEEC
Confidence 499999999999999865 3 7887774
No 122
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=34.70 E-value=36 Score=30.42 Aligned_cols=33 Identities=18% Similarity=0.003 Sum_probs=24.9
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHhhhcCCCcEEEEEEeCC
Q 012893 11 RHVAVLAFPFGTHAAPLLDLVRRLSEAALEEEVTFSFFSTA 51 (454)
Q Consensus 11 ~~il~~~~~~~GH~~p~l~la~~L~~~~~G~~h~V~~~~~~ 51 (454)
||||++ |+.|.+-. .|+++| .++| |+|+.++-.
T Consensus 1 MkILVT--GatGfIG~--~L~~~L--~~~G--~~V~~l~R~ 33 (298)
T 4b4o_A 1 MRVLVG--GGTGFIGT--ALTQLL--NARG--HEVTLVSRK 33 (298)
T ss_dssp CEEEEE--TTTSHHHH--HHHHHH--HHTT--CEEEEEESS
T ss_pred CEEEEE--CCCCHHHH--HHHHHH--HHCC--CEEEEEECC
Confidence 677654 56666654 578999 8899 999998754
No 123
>1wek_A Hypothetical protein TT1465; rossman fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 2.20A {Thermus thermophilus} SCOP: c.129.1.1
Probab=34.19 E-value=74 Score=27.25 Aligned_cols=90 Identities=11% Similarity=-0.024 Sum_probs=48.1
Q ss_pred EEEEeeCCCCCCCHHHHHHHHHHHHhcCCCEEEEEcCCcccccchhhhhhhCCCceEeeccCh-HhhhcccCcceEEecC
Q 012893 274 VIYISFGSMITPPRAEVIALAEALEAIGFPFLWSFRGNAEEQLPKGFLERTKSYGKVVPWAPQ-LKILEHSSVCVFVTHC 352 (454)
Q Consensus 274 ~v~vs~Gs~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~~~~~~nv~v~~~vp~-~~ll~~~~~~~~I~Hg 352 (454)
...|+.|.. .......++..+.+-++|-+......+..+..+ -+....++..+. +.++...+-.+++--|
T Consensus 70 ~~lVsGGg~-----GiM~aa~~gAl~~gG~~iGV~~~~P~~~~~~~~----~t~~~~~~~f~~Rk~~m~~~sda~IvlpG 140 (217)
T 1wek_A 70 FGVVTGGGP-----GVMEAVNRGAYEAGGVSVGLNIELPHEQKPNPY----QTHALSLRYFFVRKVLFVRYAVGFVFLPG 140 (217)
T ss_dssp CEEEECSCS-----HHHHHHHHHHHHTTCCEEEEEECCTTCCCCCSC----CSEEEEESCHHHHHHHHHHTEEEEEECSC
T ss_pred CEEEeCChh-----hHHHHHHHHHHHcCCCEEEEeeCCcchhhcccc----CCcCcccCCHHHHHHHHHHhCCEEEEeCC
Confidence 566666653 466667777666665555442211001111110 011233455553 3333333335778889
Q ss_pred CchhHHHHHH----------cCCCeecccc
Q 012893 353 GWNSTIEGIT----------GGVPMVCRPV 372 (454)
Q Consensus 353 G~gsv~eal~----------~GvP~i~~P~ 372 (454)
|.||.-|... +++|++++-.
T Consensus 141 G~GTL~El~e~lt~~qlg~~~~kPvvll~~ 170 (217)
T 1wek_A 141 GFGTLDELSEVLVLLQTEKVHRFPVFLLDR 170 (217)
T ss_dssp CHHHHHHHHHHHHHHHTTSSCCCCEEEECH
T ss_pred CCcHHHHHHHHHHHHhhCCCCCCCEEEeCc
Confidence 9999887632 5799998853
No 124
>1efv_B Electron transfer flavoprotein; electron transport, glutaric acidemia type II; HET: FAD AMP; 2.10A {Homo sapiens} SCOP: c.26.2.3 PDB: 1t9g_S* 2a1u_B* 2a1t_S*
Probab=33.86 E-value=63 Score=28.50 Aligned_cols=41 Identities=15% Similarity=0.097 Sum_probs=29.7
Q ss_pred HHHHHHHHhcCCCccEEEEcCchh------hHHHHHHHcCCCeEEEeCc
Q 012893 105 RALEKAVAKTGLEISCLITDAFLW------FAAEMAEEMRVPWIAYWTA 147 (454)
Q Consensus 105 ~~~~~~~~~~~~~pD~vi~d~~~~------~~~~~A~~lgiP~v~~~~~ 147 (454)
..+.++++.. +||+|++...+. .+..+|..||+|+++....
T Consensus 106 ~~La~~i~~~--~~dlVl~G~~s~d~d~~~v~p~lA~~L~~~~vt~v~~ 152 (255)
T 1efv_B 106 RVLAKLAEKE--KVDLVLLGKQAIDDDCNQTGQMTAGFLDWPQGTFASQ 152 (255)
T ss_dssp HHHHHHHHHH--TCSEEEEESCCTTTCCCCHHHHHHHHHTCCEEEEEEE
T ss_pred HHHHHHHHhc--CCCEEEEeCcccCCchhhHHHHHHHHhCCCcccceEE
Confidence 3444455544 799999885442 6779999999999987653
No 125
>3tqr_A Phosphoribosylglycinamide formyltransferase; purines, pyrimidines, nucleosides, nucleotides; HET: NHE; 1.97A {Coxiella burnetii} SCOP: c.65.1.0
Probab=32.74 E-value=2.1e+02 Score=24.32 Aligned_cols=105 Identities=11% Similarity=0.193 Sum_probs=57.4
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHhhhc-CCCcEEEEEEeCCCcCc----cccccccccCCCCeeEEeCC-CCCCCC
Q 012893 8 TQRRHVAVLAFPFGTHAAPLLDLVRRLSEAA-LEEEVTFSFFSTAQSNG----SLFMEKDELRDCKIVPYNVE-SGLPEG 81 (454)
Q Consensus 8 ~~~~~il~~~~~~~GH~~p~l~la~~L~~~~-~G~~h~V~~~~~~~~~~----~~~~~~~~~~~~~~~~~~i~-~~~~~~ 81 (454)
.+++||+++.++..+.+.- |..+. ++ .+ ++|..+.+..... +.++. |+.+..++ ..++
T Consensus 3 ~~~~riavl~SG~Gsnl~a---ll~~~--~~~~~--~eI~~Vis~~~~a~~~~~A~~~-------gIp~~~~~~~~~~-- 66 (215)
T 3tqr_A 3 REPLPIVVLISGNGTNLQA---IIGAI--QKGLA--IEIRAVISNRADAYGLKRAQQA-------DIPTHIIPHEEFP-- 66 (215)
T ss_dssp -CCEEEEEEESSCCHHHHH---HHHHH--HTTCS--EEEEEEEESCTTCHHHHHHHHT-------TCCEEECCGGGSS--
T ss_pred CCCcEEEEEEeCCcHHHHH---HHHHH--HcCCC--CEEEEEEeCCcchHHHHHHHHc-------CCCEEEeCccccC--
Confidence 3468999888877555444 44445 33 46 8988877643222 23333 78887774 1110
Q ss_pred CCCCCCCcchHHHHHHhchHHHHHHHHHHHHhcCCCccEEEEcCch-hhHHHHHHHcCCCeEEEeCc
Q 012893 82 FRFTGNPREPVEHFLKATPGNFVRALEKAVAKTGLEISCLITDAFL-WFAAEMAEEMRVPWIAYWTA 147 (454)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pD~vi~d~~~-~~~~~~A~~lgiP~v~~~~~ 147 (454)
......+.+.+.+++. +||++|.-.+. .....+-+...-.++-++++
T Consensus 67 -----------------~r~~~d~~~~~~l~~~--~~Dliv~agy~~il~~~~l~~~~~~~iNiHpS 114 (215)
T 3tqr_A 67 -----------------SRTDFESTLQKTIDHY--DPKLIVLAGFMRKLGKAFVSHYSGRMINIHPS 114 (215)
T ss_dssp -----------------SHHHHHHHHHHHHHTT--CCSEEEESSCCSCCCHHHHHHTTTSEEEEESS
T ss_pred -----------------chhHhHHHHHHHHHhc--CCCEEEEccchhhCCHHHHhhccCCeEEeCcc
Confidence 0011122334445555 99998876432 33334445556667777654
No 126
>2lnd_A De novo designed protein, PFK fold; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=32.39 E-value=36 Score=23.64 Aligned_cols=50 Identities=22% Similarity=0.166 Sum_probs=31.3
Q ss_pred HcCCCeeccccccchhH-HHHHHHHhhceeecCc-CCCCCHHHHHHHHHHHhc
Q 012893 362 TGGVPMVCRPVFADQAL-NQRIIETAWGIGVGVX-GEKFTKDETVNALKQVLS 412 (454)
Q Consensus 362 ~~GvP~i~~P~~~DQ~~-nA~~v~~~~G~G~~~~-~~~~~~~~l~~av~~vl~ 412 (454)
-+|+|++++-....|.. |-..-|.. .-|+..+ -....+++|...+++.|.
T Consensus 49 dngkplvvfvngasqndvnefqneak-kegvsydvlkstdpeeltqrvreflk 100 (112)
T 2lnd_A 49 DNGKPLVVFVNGASQNDVNEFQNEAK-KEGVSYDVLKSTDPEELTQRVREFLK 100 (112)
T ss_dssp TCCSCEEEEECSCCHHHHHHHHHHHH-HHTCEEEEEECCCHHHHHHHHHHHHH
T ss_pred hcCCeEEEEecCcccccHHHHHHHHH-hcCcchhhhccCCHHHHHHHHHHHHH
Confidence 46899998877666655 43333444 4444432 112578899888888774
No 127
>1zl0_A Hypothetical protein PA5198; structural genomics, PSI, PROT structure initiative, midwest center for structural genomic unknown function; HET: TLA PEG; 1.10A {Pseudomonas aeruginosa} SCOP: c.8.10.1 c.23.16.7 PDB: 1zrs_A 2aum_A 2aun_A
Probab=32.30 E-value=76 Score=28.90 Aligned_cols=73 Identities=15% Similarity=0.316 Sum_probs=56.5
Q ss_pred CHHHHHHHHHHHHhcCCCEEEEEcCCcccccchhhhhhhCCCceEeeccChHhhhc-ccCcceEEecCCchhHHHHHH-c
Q 012893 286 PRAEVIALAEALEAIGFPFLWSFRGNAEEQLPKGFLERTKSYGKVVPWAPQLKILE-HSSVCVFVTHCGWNSTIEGIT-G 363 (454)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~~~~~~nv~v~~~vp~~~ll~-~~~~~~~I~HgG~gsv~eal~-~ 363 (454)
+......+.+++.+...+.||.+.+.. +-.++.++++...+-+ ++. .+|-++-...++-+++ .
T Consensus 65 d~~Ra~dL~~a~~Dp~i~aI~~~rGGy-------------ga~rlLp~LD~~~i~~a~PK--~~iGySDiTaL~~al~~~ 129 (311)
T 1zl0_A 65 VEQRLEDLHNAFDMPDITAVWCLRGGY-------------GCGQLLPGLDWGRLQAASPR--PLIGFSDISVLLSAFHRH 129 (311)
T ss_dssp HHHHHHHHHHHHHSTTEEEEEESCCSS-------------CGGGGTTTCCHHHHHHSCCC--CEEECGGGHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhCCCCCEEEEccCCc-------------CHHHHhhccchhhhhccCCC--EEEEEchhHHHHHHHHHc
Confidence 567778899999999999999988764 2234566777777666 677 9999999999999987 4
Q ss_pred CCCeeccccc
Q 012893 364 GVPMVCRPVF 373 (454)
Q Consensus 364 GvP~i~~P~~ 373 (454)
|.+-+.-|..
T Consensus 130 G~~t~hGp~~ 139 (311)
T 1zl0_A 130 GLPAIHGPVA 139 (311)
T ss_dssp TCCEEECCCG
T ss_pred CCcEEECHhh
Confidence 7877777753
No 128
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=32.27 E-value=49 Score=30.26 Aligned_cols=39 Identities=10% Similarity=0.037 Sum_probs=26.3
Q ss_pred cEEEEEcCCCcc---C--HHHHHHHHHHHhhhcCCCcEEEEEEeCCCc
Q 012893 11 RHVAVLAFPFGT---H--AAPLLDLVRRLSEAALEEEVTFSFFSTAQS 53 (454)
Q Consensus 11 ~~il~~~~~~~G---H--~~p~l~la~~L~~~~~G~~h~V~~~~~~~~ 53 (454)
..|++.|....+ . ..-+..+++.| .++| ++|.+++++..
T Consensus 181 ~~i~l~pga~~~~~k~wp~~~~~~l~~~L--~~~~--~~vvl~g~~~e 224 (348)
T 1psw_A 181 PMIGFCPGAEFGPAKRWPHYHYAELAKQL--IDEG--YQVVLFGSAKD 224 (348)
T ss_dssp CEEEEECCCTTCGGGSCCHHHHHHHHHHH--HHTT--CEEEECCCGGG
T ss_pred cEEEEECCCCccccCCCCHHHHHHHHHHH--HHCC--CeEEEEeChhh
Confidence 456666644222 1 34788999999 7679 99998876543
No 129
>1efp_B ETF, protein (electron transfer flavoprotein); electron transport, glutaric acidemia type II; HET: FAD AMP; 2.60A {Paracoccus denitrificans} SCOP: c.26.2.3
Probab=31.90 E-value=62 Score=28.47 Aligned_cols=39 Identities=8% Similarity=-0.007 Sum_probs=28.4
Q ss_pred HHHHHHHhcCCCccEEEEcCchh------hHHHHHHHcCCCeEEEeC
Q 012893 106 ALEKAVAKTGLEISCLITDAFLW------FAAEMAEEMRVPWIAYWT 146 (454)
Q Consensus 106 ~~~~~~~~~~~~pD~vi~d~~~~------~~~~~A~~lgiP~v~~~~ 146 (454)
.+.++++.. +||+|++...+. .+..+|..||+|+++..+
T Consensus 104 ~La~~i~~~--~~dlVl~G~~s~d~~~~~v~p~lA~~L~~~~vt~v~ 148 (252)
T 1efp_B 104 ILAAVARAE--GTELIIAGKQAIDNDMNATGQMLAAILGWAQATFAS 148 (252)
T ss_dssp HHHHHHHHH--TCSEEEEESCCTTTCCCCHHHHHHHHHTCEEEEEEE
T ss_pred HHHHHHHhc--CCCEEEEcCCccCCchhhHHHHHHHHhCCCccccEE
Confidence 344444443 799999885442 677999999999999764
No 130
>1t35_A Hypothetical protein YVDD, putative lysine decarboxylase; structural genomics target, NYSGXRC, PSI, protein structure initiative; 2.72A {Bacillus subtilis} SCOP: c.129.1.1
Probab=31.80 E-value=1.6e+02 Score=24.50 Aligned_cols=44 Identities=16% Similarity=0.003 Sum_probs=29.4
Q ss_pred ceEeeccCh-H-hhhcccCcceEEecCCchhHHHH---H------HcCCCeecccc
Q 012893 328 GKVVPWAPQ-L-KILEHSSVCVFVTHCGWNSTIEG---I------TGGVPMVCRPV 372 (454)
Q Consensus 328 v~v~~~vp~-~-~ll~~~~~~~~I~HgG~gsv~ea---l------~~GvP~i~~P~ 372 (454)
..+++..+. + .+...++ .+++--||.||.-|. + .+++|++++-.
T Consensus 81 ~~~~~~~~~Rk~~~~~~sd-a~IvlPGG~GTl~El~e~lt~~q~g~~~kPvvll~~ 135 (191)
T 1t35_A 81 LIEVNGMHERKAKMSELAD-GFISMPGGFGTYEELFEVLCWAQIGIHQKPIGLYNV 135 (191)
T ss_dssp EEEESHHHHHHHHHHHHCS-EEEECSCCHHHHHHHHHHHHTTSCSSCCCCEEEECG
T ss_pred cccCCCHHHHHHHHHHHCC-EEEEeCCCccHHHHHHHHHHHHHhCCCCCCEEEecC
Confidence 344555553 3 3444455 688889999997765 4 37899998854
No 131
>3eya_A Pyruvate dehydrogenase [cytochrome]; pyruvate oxidase, membrane-associated flavoprotein dehydrogenase, interactions with lipids cell membrane; HET: TDP FAD; 2.50A {Escherichia coli} PDB: 3ey9_A*
Probab=31.44 E-value=93 Score=30.81 Aligned_cols=77 Identities=16% Similarity=0.250 Sum_probs=44.0
Q ss_pred HHHHHHHHhcCCCEEEEEcCCcccccchhhhhhhCCCceEeeccC----------hHhhhcccCcceEEecCCch-----
Q 012893 291 IALAEALEAIGFPFLWSFRGNAEEQLPKGFLERTKSYGKVVPWAP----------QLKILEHSSVCVFVTHCGWN----- 355 (454)
Q Consensus 291 ~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~~~~~~nv~v~~~vp----------~~~ll~~~~~~~~I~HgG~g----- 355 (454)
+.+++.|++.|.+.++...+.....+-+.+.+. +++..+.-.. +..+-.++ .++++|.|-|
T Consensus 7 ~~l~~~L~~~GV~~vfg~PG~~~~~l~dal~~~--~~i~~i~~~~E~~Aa~~A~GyAr~tg~~--~v~~~TsGpG~~N~~ 82 (549)
T 3eya_A 7 AYIAKTLESAGVKRIWGVTGDSLNGLSDSLNRM--GTIEWMSTRHEEVAAFAAGAEAQLSGEL--AVCAGSCGPGNLHLI 82 (549)
T ss_dssp HHHHHHHHHTTCCEEEECCCGGGHHHHHHHHHH--CSSEEEECSSHHHHHHHHHHHHHHHSSC--EEEEECTTHHHHTTH
T ss_pred HHHHHHHHHCCCCEEEEcCCCchHHHHHHHHhc--CCCeEEEeCChHHHHHHHHHHHHHhCCC--EEEEeCCCCcHhhhH
Confidence 456666666676666666655433333333221 2233222111 11112223 4899999976
Q ss_pred -hHHHHHHcCCCeeccc
Q 012893 356 -STIEGITGGVPMVCRP 371 (454)
Q Consensus 356 -sv~eal~~GvP~i~~P 371 (454)
.+.||-+.++|+|++-
T Consensus 83 ~gi~~A~~~~vPvl~it 99 (549)
T 3eya_A 83 NGLFDCHRNHVPVLAIA 99 (549)
T ss_dssp HHHHHHHHTTCCEEEEE
T ss_pred HHHHHHHhhCCCEEEEe
Confidence 8899999999999874
No 132
>3zqu_A Probable aromatic acid decarboxylase; lyase; HET: FNR; 1.50A {Pseudomonas aeruginosa} SCOP: c.34.1.0
Probab=31.06 E-value=2e+02 Score=24.39 Aligned_cols=116 Identities=10% Similarity=0.024 Sum_probs=64.1
Q ss_pred cEEEEeeCCCCCCCHHHHHHHHHHHHhcCCCEEEEEcCCcccccchhhhhhhC------------------CCceEe---
Q 012893 273 SVIYISFGSMITPPRAEVIALAEALEAIGFPFLWSFRGNAEEQLPKGFLERTK------------------SYGKVV--- 331 (454)
Q Consensus 273 ~~v~vs~Gs~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~~~~~------------------~nv~v~--- 331 (454)
.+++.-.|+++ .-....+++.+.+.|+.+-++........+.....+..+ ....+.
T Consensus 6 ~IllgvTGaia---a~k~~~ll~~L~~~g~eV~vv~T~~A~~fi~~et~~~ls~~~v~~~~~~~~~~~~~~~~~~~~~~~ 82 (209)
T 3zqu_A 6 RITLAMTGASG---AQYGLRLLDCLVQEEREVHFLISKAAQLVMATETDVALPAKPQAMQAFLTEYCGAAAGQIRVFGQN 82 (209)
T ss_dssp EEEEEECSSSC---HHHHHHHHHHHHHTTCEEEEEECHHHHHHHHHHCSCCCCSSHHHHHHHHHHHHTCCTTTEEECCTT
T ss_pred EEEEEEECHHH---HHHHHHHHHHHHHCCCEEEEEECccHHHHHHHHhCCcccCCccchhhhhhhhhhcccccceecccc
Confidence 35555555554 233456778888788877766665421111100000000 011111
Q ss_pred eccChHhhhcc-cCcceEEecCCchhHH----------------HHHHcCCCeeccccc----cchhHHHHHHHHhhcee
Q 012893 332 PWAPQLKILEH-SSVCVFVTHCGWNSTI----------------EGITGGVPMVCRPVF----ADQALNQRIIETAWGIG 390 (454)
Q Consensus 332 ~~vp~~~ll~~-~~~~~~I~HgG~gsv~----------------eal~~GvP~i~~P~~----~DQ~~nA~~v~~~~G~G 390 (454)
+++.+-++-.. ++ .++|.-+-.||+. .+|..++|++++|-. .=...|...+.+. |+=
T Consensus 83 d~~~hI~~~~~~aD-~mvIaPaSanTlakiA~GiaDnLltraadv~Lk~~~plvl~Paem~~~~~~~~Nm~~L~~~-G~~ 160 (209)
T 3zqu_A 83 DWMAPPASGSSAPN-AMVICPCSTGTLSAVATGACNNLIERAADVALKERRPLVLVPREAPFSSIHLENMLKLSNL-GAV 160 (209)
T ss_dssp CTTSGGGCTTSCCC-EEEEEEECHHHHHHHHHTCCCSHHHHHHHHHHHHTCCEEEEECCSSCCHHHHHHHHHHHHH-TCE
T ss_pred cccCCccccCcccC-EEEEeeCCHhHHHHHHccccCcHHHHHHHHHHhcCCcEEEEEcccccCHHHHHHHHHHHHC-CCE
Confidence 33444444443 44 5788888877654 456779999999951 2245678888888 875
Q ss_pred ecC
Q 012893 391 VGV 393 (454)
Q Consensus 391 ~~~ 393 (454)
+.-
T Consensus 161 iip 163 (209)
T 3zqu_A 161 ILP 163 (209)
T ss_dssp ECC
T ss_pred EeC
Confidence 443
No 133
>3n7t_A Macrophage binding protein; seattle structural genomics center for infectious disease, S macrophage, pathogenic fungus, coccidioidomycosis; 2.10A {Coccidioides immitis} SCOP: c.23.16.0
Probab=31.00 E-value=69 Score=28.02 Aligned_cols=39 Identities=13% Similarity=0.020 Sum_probs=29.4
Q ss_pred CCcEEEEEcCCCcc-----------CHHHHHHHHHHHhhhcCCCcEEEEEEeCC
Q 012893 9 QRRHVAVLAFPFGT-----------HAAPLLDLVRRLSEAALEEEVTFSFFSTA 51 (454)
Q Consensus 9 ~~~~il~~~~~~~G-----------H~~p~l~la~~L~~~~~G~~h~V~~~~~~ 51 (454)
.|.|||++.....+ ...=++.--..| ++.| ++|+++++.
T Consensus 8 ~mkkvlvvlt~~~~~~~~~g~~tG~~~~E~~~p~~~l--~~aG--~~V~~aSp~ 57 (247)
T 3n7t_A 8 LPRKALLAITSAHPPFWPDGKRTGLFFSEALHPFNEL--TAAG--FEVDVASET 57 (247)
T ss_dssp CCSEEEEECCCCCCBCSTTSCBCCBCHHHHHHHHHHH--HHTT--CEEEEEESS
T ss_pred cCCeEEEEECCCCcccCCCCCCCcccHHHHHHHHHHH--HHCC--CEEEEEeCC
Confidence 36789888776421 255567778889 9999 999999974
No 134
>2r8r_A Sensor protein; KDPD, PFAM02702, MCSG, structural genomics, protein structure initiative, midwest center for structural genomics, kinase; 2.30A {Pseudomonas syringae PV}
Probab=29.82 E-value=56 Score=28.27 Aligned_cols=40 Identities=15% Similarity=-0.062 Sum_probs=35.3
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHhhhcCCCcEEEEEEeCCC
Q 012893 9 QRRHVAVLAFPFGTHAAPLLDLVRRLSEAALEEEVTFSFFSTAQ 52 (454)
Q Consensus 9 ~~~~il~~~~~~~GH~~p~l~la~~L~~~~~G~~h~V~~~~~~~ 52 (454)
-+++|++..-|+-|=.+-++.+|.+| .++| ++|.++....
T Consensus 5 g~l~I~~~~kgGvGKTt~a~~la~~l--~~~G--~~V~v~d~D~ 44 (228)
T 2r8r_A 5 GRLKVFLGAAPGVGKTYAMLQAAHAQ--LRQG--VRVMAGVVET 44 (228)
T ss_dssp CCEEEEEESSTTSSHHHHHHHHHHHH--HHTT--CCEEEEECCC
T ss_pred ceEEEEEECCCCCcHHHHHHHHHHHH--HHCC--CCEEEEEeCC
Confidence 36888999999999999999999999 8899 9998877753
No 135
>3qvl_A Putative hydantoin racemase; isomerase; HET: 5HY; 1.82A {Klebsiella pneumoniae subsp} PDB: 3qvk_A* 3qvj_A
Probab=29.66 E-value=2.7e+02 Score=24.03 Aligned_cols=37 Identities=11% Similarity=-0.006 Sum_probs=28.5
Q ss_pred cEEEEEcCCCccCH-HHHHHHHHHHhhhcCCCcEEEEEEeCC
Q 012893 11 RHVAVLAFPFGTHA-APLLDLVRRLSEAALEEEVTFSFFSTA 51 (454)
Q Consensus 11 ~~il~~~~~~~GH~-~p~l~la~~L~~~~~G~~h~V~~~~~~ 51 (454)
|||+++-..+.-++ ..+...++.+ ...| .+|.+.+.+
T Consensus 2 mrilvINPnts~~~T~~i~~~~~~~--~~p~--~~i~~~t~~ 39 (245)
T 3qvl_A 2 VRIQVINPNTSLAMTETIGAAARAV--AAPG--TEILAVCPR 39 (245)
T ss_dssp EEEEEECSSCCHHHHHHHHHHHHHH--CCTT--EEEEEECCS
T ss_pred CEEEEEeCCCCHHHHHHHHHHHHHh--cCCC--CEEEEEeCC
Confidence 68988887766666 4566688888 7789 999988865
No 136
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=29.53 E-value=27 Score=27.68 Aligned_cols=34 Identities=15% Similarity=0.216 Sum_probs=26.0
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHhhhcCCCcEEEEEEeCC
Q 012893 9 QRRHVAVLAFPFGTHAAPLLDLVRRLSEAALEEEVTFSFFSTA 51 (454)
Q Consensus 9 ~~~~il~~~~~~~GH~~p~l~la~~L~~~~~G~~h~V~~~~~~ 51 (454)
.+.||+++-+ |++- ..+++.| .+.| |+|+++...
T Consensus 2 ~~~~vlI~G~---G~vG--~~la~~L--~~~g--~~V~vid~~ 35 (153)
T 1id1_A 2 RKDHFIVCGH---SILA--INTILQL--NQRG--QNVTVISNL 35 (153)
T ss_dssp CCSCEEEECC---SHHH--HHHHHHH--HHTT--CCEEEEECC
T ss_pred CCCcEEEECC---CHHH--HHHHHHH--HHCC--CCEEEEECC
Confidence 3468888844 5554 6788999 8899 999999874
No 137
>1jkx_A GART;, phosphoribosylglycinamide formyltransferase; purine biosynthesis, anti-cancer agent; HET: 138; 1.60A {Escherichia coli} SCOP: c.65.1.1 PDB: 1cdd_A 1cde_A* 1c2t_A* 1grc_A 1gar_A* 2gar_A 3gar_A 1c3e_A*
Probab=29.26 E-value=2.4e+02 Score=23.87 Aligned_cols=102 Identities=10% Similarity=0.114 Sum_probs=56.2
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHhhhcC--CCcEEEEEEeCCCcCc----cccccccccCCCCeeEEeCC-CCCCCCCC
Q 012893 11 RHVAVLAFPFGTHAAPLLDLVRRLSEAAL--EEEVTFSFFSTAQSNG----SLFMEKDELRDCKIVPYNVE-SGLPEGFR 83 (454)
Q Consensus 11 ~~il~~~~~~~GH~~p~l~la~~L~~~~~--G~~h~V~~~~~~~~~~----~~~~~~~~~~~~~~~~~~i~-~~~~~~~~ 83 (454)
+||+++.++..+. +-+|..++ ++. + |+|..+.+..... +.++. |+++..++ ..+.
T Consensus 1 ~ri~vl~Sg~gsn---l~ali~~~--~~~~~~--~~i~~Vis~~~~~~~~~~A~~~-------gIp~~~~~~~~~~---- 62 (212)
T 1jkx_A 1 MNIVVLISGNGSN---LQAIIDAC--KTNKIK--GTVRAVFSNKADAFGLERARQA-------GIATHTLIASAFD---- 62 (212)
T ss_dssp CEEEEEESSCCHH---HHHHHHHH--HTTSSS--SEEEEEEESCTTCHHHHHHHHT-------TCEEEECCGGGCS----
T ss_pred CEEEEEEECCcHH---HHHHHHHH--HcCCCC--ceEEEEEeCCCchHHHHHHHHc-------CCcEEEeCccccc----
Confidence 4788887776643 55667777 443 6 7887666543222 23333 78887763 1110
Q ss_pred CCCCCcchHHHHHHhchHHHHHHHHHHHHhcCCCccEEEEcCch-hhHHHHHHHcCCCeEEEeCc
Q 012893 84 FTGNPREPVEHFLKATPGNFVRALEKAVAKTGLEISCLITDAFL-WFAAEMAEEMRVPWIAYWTA 147 (454)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pD~vi~d~~~-~~~~~~A~~lgiP~v~~~~~ 147 (454)
....+.+.+.+.+++. +||++|.-.+. .....+-+.....++-++++
T Consensus 63 ---------------~r~~~~~~~~~~l~~~--~~Dliv~agy~~il~~~~l~~~~~~~iNiHpS 110 (212)
T 1jkx_A 63 ---------------SREAYDRELIHEIDMY--APDVVVLAGFMRILSPAFVSHYAGRLLNIHPS 110 (212)
T ss_dssp ---------------SHHHHHHHHHHHHGGG--CCSEEEESSCCSCCCHHHHHHTTTSEEEEESS
T ss_pred ---------------chhhccHHHHHHHHhc--CCCEEEEeChhhhCCHHHHhhccCCEEEEccC
Confidence 0012222233445555 99998876442 33334445566677777654
No 138
>1weh_A Conserved hypothetical protein TT1887; rossman fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.129.1.1
Probab=29.09 E-value=77 Score=25.91 Aligned_cols=88 Identities=16% Similarity=-0.000 Sum_probs=43.8
Q ss_pred EEEEeeCCCCCCCHHHHHHHHHHHHhcCCCEEEEEcCCcccccchh-hhhhhCCCceEeeccCh-Hhhh-cccCcceEEe
Q 012893 274 VIYISFGSMITPPRAEVIALAEALEAIGFPFLWSFRGNAEEQLPKG-FLERTKSYGKVVPWAPQ-LKIL-EHSSVCVFVT 350 (454)
Q Consensus 274 ~v~vs~Gs~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~-~~~~~~~nv~v~~~vp~-~~ll-~~~~~~~~I~ 350 (454)
...|+.|..+ ......++..+.+-+++=+.+.. .+|.+ ..+..-....+++..+. +.++ ..++ .+++-
T Consensus 34 ~~lV~Ggg~G-----iM~aa~~gAl~~gG~tiGV~~~~---~~p~e~~~~~~~~~~~~~~~f~~Rk~~~~~~sd-a~ivl 104 (171)
T 1weh_A 34 FGLACGGYQG-----GMEALARGVKAKGGLVVGVTAPA---FFPERRGPNPFVDLELPAATLPQRIGRLLDLGA-GYLAL 104 (171)
T ss_dssp EEEEECCSST-----HHHHHHHHHHHTTCCEEECCCGG---GCTTSCSSCTTCSEECCCSSHHHHHHHHHHHEE-EEEEC
T ss_pred CEEEeCChhh-----HHHHHHHHHHHcCCcEEEEeccc---cCcccccccCCCceeeecCCHHHHHHHHHHhCC-EEEEe
Confidence 5566665442 45555555555555554443321 01111 00000011122344443 3333 3444 68888
Q ss_pred cCCchhHHHH---HH-------cCCCeeccc
Q 012893 351 HCGWNSTIEG---IT-------GGVPMVCRP 371 (454)
Q Consensus 351 HgG~gsv~ea---l~-------~GvP~i~~P 371 (454)
-||.||.-|. +. +++| +++-
T Consensus 105 pGG~GTl~El~e~lt~~q~g~~~~kP-vll~ 134 (171)
T 1weh_A 105 PGGVGTLAELVLAWNLLYLRRGVGRP-LAVD 134 (171)
T ss_dssp SCCHHHHHHHHHHHHHHHTCSSCSCC-EEEC
T ss_pred CCCccHHHHHHHHHHHHHhCccCCCe-EEEC
Confidence 9999997665 44 7899 7764
No 139
>3s40_A Diacylglycerol kinase; structural genomics, the center for structural genomics of infectious diseases, csgid, transfer; 2.10A {Bacillus anthracis} PDB: 3t5p_A
Probab=28.73 E-value=1e+02 Score=27.79 Aligned_cols=80 Identities=8% Similarity=0.026 Sum_probs=47.5
Q ss_pred EEEEeeCCCCCCCHHHHHHHHHHHHhcCCCEEEEEcCCcccccchhhhhhhCCCceEeeccChHhhhcccCcceEEecCC
Q 012893 274 VIYISFGSMITPPRAEVIALAEALEAIGFPFLWSFRGNAEEQLPKGFLERTKSYGKVVPWAPQLKILEHSSVCVFVTHCG 353 (454)
Q Consensus 274 ~v~vs~Gs~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~~~~~~nv~v~~~vp~~~ll~~~~~~~~I~HgG 353 (454)
.++++--|-.......+..+...++..+..+.+........ ...+.+ .+.. ..+.+|.-||
T Consensus 12 ~vi~Np~sG~~~~~~~~~~i~~~l~~~~~~~~~~~t~~~~~--a~~~~~---------------~~~~--~~d~vv~~GG 72 (304)
T 3s40_A 12 LLIVNPKAGQGDLHTNLTKIVPPLAAAFPDLHILHTKEQGD--ATKYCQ---------------EFAS--KVDLIIVFGG 72 (304)
T ss_dssp EEEECTTCSSSCHHHHHHHHHHHHHHHCSEEEEEECCSTTH--HHHHHH---------------HHTT--TCSEEEEEEC
T ss_pred EEEECcccCCCchHHHHHHHHHHHHHcCCeEEEEEccCcch--HHHHHH---------------Hhhc--CCCEEEEEcc
Confidence 45555543332234556778888888787766554332110 011110 0111 2349999999
Q ss_pred chhHHHHHH------cCCCeecccc
Q 012893 354 WNSTIEGIT------GGVPMVCRPV 372 (454)
Q Consensus 354 ~gsv~eal~------~GvP~i~~P~ 372 (454)
=||+.|++. .++|+-++|.
T Consensus 73 DGTl~~v~~~l~~~~~~~~l~iiP~ 97 (304)
T 3s40_A 73 DGTVFECTNGLAPLEIRPTLAIIPG 97 (304)
T ss_dssp HHHHHHHHHHHTTCSSCCEEEEEEC
T ss_pred chHHHHHHHHHhhCCCCCcEEEecC
Confidence 999999864 5789999997
No 140
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=28.69 E-value=52 Score=28.42 Aligned_cols=27 Identities=15% Similarity=0.228 Sum_probs=23.4
Q ss_pred CCccEEEEcCchhhHHHHHHHcCCCeEEEe
Q 012893 116 LEISCLITDAFLWFAAEMAEEMRVPWIAYW 145 (454)
Q Consensus 116 ~~pD~vi~d~~~~~~~~~A~~lgiP~v~~~ 145 (454)
.+.|+||.+.. +..+|+++|+|.+.+.
T Consensus 153 ~G~~vVVG~~~---~~~~A~~~Gl~~vlI~ 179 (225)
T 2pju_A 153 NGTEAVVGAGL---ITDLAEEAGMTGIFIY 179 (225)
T ss_dssp TTCCEEEESHH---HHHHHHHTTSEEEESS
T ss_pred CCCCEEECCHH---HHHHHHHcCCcEEEEC
Confidence 48999999954 4689999999999987
No 141
>3bq9_A Predicted rossmann fold nucleotide-binding domain containing protein; structural genomics, PSI-2, protein structure initiative; 1.80A {Idiomarina baltica}
Probab=28.51 E-value=86 Score=30.14 Aligned_cols=32 Identities=9% Similarity=0.170 Sum_probs=23.8
Q ss_pred hhhcccCcceEEecCCchhHHHHHH------------cCCCeecc
Q 012893 338 KILEHSSVCVFVTHCGWNSTIEGIT------------GGVPMVCR 370 (454)
Q Consensus 338 ~ll~~~~~~~~I~HgG~gsv~eal~------------~GvP~i~~ 370 (454)
.++..++ .+++--||+||.-|... +++|++++
T Consensus 241 ~mv~~SD-AfIaLPGG~GTLeELfEaLT~~QLg~~k~~~kPVVLl 284 (460)
T 3bq9_A 241 AFVRCAH-GIVIFPGGAGTAEELLYLLGILMHPDNQRQSLPVILT 284 (460)
T ss_dssp HHHHHCS-EEEECSCSHHHHHHHHHHHHHHTSGGGTTCCCCEEEE
T ss_pred HHHHhCC-EEEEcCCCcchHHHHHHHHHHHhhccccCCCCCEEEE
Confidence 4444555 57788999999888732 68999988
No 142
>3mjf_A Phosphoribosylamine--glycine ligase; structural genomics, CEN structural genomics of infectious diseases, csgid; HET: MSE PGE; 1.47A {Yersinia pestis} PDB: 1gso_A
Probab=28.45 E-value=77 Score=30.29 Aligned_cols=24 Identities=8% Similarity=-0.115 Sum_probs=18.6
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHhhhcCC
Q 012893 10 RRHVAVLAFPFGTHAAPLLDLVRRLSEAALE 40 (454)
Q Consensus 10 ~~~il~~~~~~~GH~~p~l~la~~L~~~~~G 40 (454)
+||||++-.+++ -.+||++| .+.+
T Consensus 3 ~mkvlviG~ggr-----e~ala~~l--~~s~ 26 (431)
T 3mjf_A 3 AMNILIIGNGGR-----EHALGWKA--AQSP 26 (431)
T ss_dssp CEEEEEEECSHH-----HHHHHHHH--TTCT
T ss_pred CcEEEEECCCHH-----HHHHHHHH--HhCC
Confidence 589999977754 55789999 6665
No 143
>3lrx_A Putative hydrogenase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.60A {Pyrococcus furiosus}
Probab=28.00 E-value=35 Score=27.45 Aligned_cols=38 Identities=3% Similarity=0.036 Sum_probs=30.0
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHhhhcCCCcEEEEEEeCCCcC
Q 012893 10 RRHVAVLAFPFGTHAAPLLDLVRRLSEAALEEEVTFSFFSTAQSN 54 (454)
Q Consensus 10 ~~~il~~~~~~~GH~~p~l~la~~L~~~~~G~~h~V~~~~~~~~~ 54 (454)
..+++++..++. +.|++.+++.| .++| .+|+++ .....
T Consensus 23 ~~~~llIaGG~G--ItPl~sm~~~l--~~~~--~~v~l~-g~r~~ 60 (158)
T 3lrx_A 23 FGKILAIGAYTG--IVEVYPIAKAW--QEIG--NDVTTL-HVTFE 60 (158)
T ss_dssp CSEEEEEEETTH--HHHHHHHHHHH--HHHT--CEEEEE-EECBG
T ss_pred CCeEEEEEccCc--HHHHHHHHHHH--HhcC--CcEEEE-EeCCH
Confidence 357888877764 99999999999 7788 899998 54443
No 144
>1ozh_A ALS, acetolactate synthase, catabolic; acetohydroxyacid synthase, thiamin diphosphate, lyase; HET: PGE HE3; 2.00A {Klebsiella pneumoniae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1ozg_A* 1ozf_A*
Probab=27.92 E-value=1.1e+02 Score=30.34 Aligned_cols=77 Identities=18% Similarity=0.217 Sum_probs=48.0
Q ss_pred HHHHHHHHHhcCCCEEEEEcCCcccccchhhhhhhCCCceEeeccC----------hHhhhcccCcceEEecCCc-----
Q 012893 290 VIALAEALEAIGFPFLWSFRGNAEEQLPKGFLERTKSYGKVVPWAP----------QLKILEHSSVCVFVTHCGW----- 354 (454)
Q Consensus 290 ~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~~~~~~nv~v~~~vp----------~~~ll~~~~~~~~I~HgG~----- 354 (454)
.+.+++.|.+.|.+.++...+.....+-+.+.+ +.+..+.-.. +..+-.+ .+++++|.|-
T Consensus 14 a~~l~~~L~~~GV~~vfg~PG~~~~~l~~al~~---~~i~~v~~~~E~~Aa~~A~Gyar~tg~--p~v~~~TsGpG~~N~ 88 (566)
T 1ozh_A 14 ADLVVSQLEAQGVRQVFGIPGAKIDKVFDSLLD---SSIRIIPVRHEANAAFMAAAVGRITGK--AGVALVTSGPGCSNL 88 (566)
T ss_dssp HHHHHHHHHHHTCCEEEEECCTTTHHHHHHGGG---SSSEEEECSSHHHHHHHHHHHHHHHSS--CEEEEECSTHHHHTT
T ss_pred HHHHHHHHHHCCCCEEEEcCCCchHHHHHHHHh---CCCcEEEeCCHHHHHHHHHHHHHHHCC--CEEEEEccChHHHHH
Confidence 356777788888888877777654333333322 2343332221 1111122 3489999996
Q ss_pred -hhHHHHHHcCCCeeccc
Q 012893 355 -NSTIEGITGGVPMVCRP 371 (454)
Q Consensus 355 -gsv~eal~~GvP~i~~P 371 (454)
+.+.||.+.++|+|++-
T Consensus 89 ~~~l~~A~~~~vPll~it 106 (566)
T 1ozh_A 89 ITGMATANSEGDPVVALG 106 (566)
T ss_dssp HHHHHHHHHHTCCEEEEE
T ss_pred HHHHHHHHhcCCCEEEEe
Confidence 68899999999999874
No 145
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=27.72 E-value=21 Score=30.09 Aligned_cols=31 Identities=13% Similarity=0.123 Sum_probs=26.0
Q ss_pred cCcceEEecCCchhHHHHHHcCCCeecccccc
Q 012893 343 SSVCVFVTHCGWNSTIEGITGGVPMVCRPVFA 374 (454)
Q Consensus 343 ~~~~~~I~HgG~gsv~eal~~GvP~i~~P~~~ 374 (454)
..++++|+.||........ .++|+|-++..+
T Consensus 50 ~~~dVIISRGgta~~lr~~-~~iPVV~I~~s~ 80 (196)
T 2q5c_A 50 DEVDAIISRGATSDYIKKS-VSIPSISIKVTR 80 (196)
T ss_dssp TTCSEEEEEHHHHHHHHTT-CSSCEEEECCCH
T ss_pred CCCeEEEECChHHHHHHHh-CCCCEEEEcCCH
Confidence 4456999999999999975 689999999754
No 146
>1jx7_A Hypothetical protein YCHN; NEW fold, hexamer, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; 2.80A {Escherichia coli} SCOP: c.114.1.1
Probab=27.66 E-value=52 Score=24.52 Aligned_cols=43 Identities=12% Similarity=0.049 Sum_probs=29.4
Q ss_pred EEEEEcCC---CccCHHHHHHHHHHHhhhcC-CCcE-EEEEEeCCCcCcccc
Q 012893 12 HVAVLAFP---FGTHAAPLLDLVRRLSEAAL-EEEV-TFSFFSTAQSNGSLF 58 (454)
Q Consensus 12 ~il~~~~~---~~GH~~p~l~la~~L~~~~~-G~~h-~V~~~~~~~~~~~~~ 58 (454)
|++++... +.......+.+|..+ .+. | | +|+++........+.
T Consensus 3 k~~ii~~~~p~~~~~~~~al~~a~~~--~~~~g--~~~v~vff~~dgV~~~~ 50 (117)
T 1jx7_A 3 KIVIVANGAPYGSESLFNSLRLAIAL--REQES--NLDLRLFLMSDAVTAGL 50 (117)
T ss_dssp EEEEEECCCTTTCSHHHHHHHHHHHH--HHHCT--TCEEEEEECGGGGGGGB
T ss_pred EEEEEEcCCCCCcHHHHHHHHHHHHH--HhcCC--CccEEEEEEchHHHHHh
Confidence 55444443 345577789999999 677 9 8 888888765554443
No 147
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=27.35 E-value=1.1e+02 Score=28.19 Aligned_cols=37 Identities=8% Similarity=0.072 Sum_probs=26.4
Q ss_pred cEEEEeeCCCCCCCHHHHHHHHHHHHhcCCCEEEEEcCC
Q 012893 273 SVIYISFGSMITPPRAEVIALAEALEAIGFPFLWSFRGN 311 (454)
Q Consensus 273 ~~v~vs~Gs~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 311 (454)
.+++++.|+.+ ....+..+.+.+.+.|+.+.+.++..
T Consensus 6 ~il~~~~~~~G--hv~~~~~La~~L~~~GheV~v~~~~~ 42 (402)
T 3ia7_A 6 HILFANVQGHG--HVYPSLGLVSELARRGHRITYVTTPL 42 (402)
T ss_dssp EEEEECCSSHH--HHHHHHHHHHHHHHTTCEEEEEECHH
T ss_pred EEEEEeCCCCc--ccccHHHHHHHHHhCCCEEEEEcCHH
Confidence 36777777554 23345578889999999999988653
No 148
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=27.19 E-value=44 Score=32.83 Aligned_cols=37 Identities=14% Similarity=0.358 Sum_probs=29.4
Q ss_pred CCCCcEEEEEcCCCccCHHHHHHHHHHHhhhcCCCcEEEEEEeCCC
Q 012893 7 STQRRHVAVLAFPFGTHAAPLLDLVRRLSEAALEEEVTFSFFSTAQ 52 (454)
Q Consensus 7 ~~~~~~il~~~~~~~GH~~p~l~la~~L~~~~~G~~h~V~~~~~~~ 52 (454)
+..|+|||++-.+.-| +.+|+.| .+.+ ++|+++....
T Consensus 39 ~~~KprVVIIGgG~AG-----l~~A~~L--~~~~--~~VtLId~~~ 75 (502)
T 4g6h_A 39 HSDKPNVLILGSGWGA-----ISFLKHI--DTKK--YNVSIISPRS 75 (502)
T ss_dssp SCSSCEEEEECSSHHH-----HHHHHHS--CTTT--CEEEEEESSS
T ss_pred CCCCCCEEEECCcHHH-----HHHHHHh--hhCC--CcEEEECCCC
Confidence 3457899999877555 5789999 8899 9999998754
No 149
>2bon_A Lipid kinase; DAG kinase, transferase; 1.90A {Escherichia coli} SCOP: e.52.1.2 PDB: 2jgr_A 2p1r_A
Probab=27.12 E-value=1.1e+02 Score=27.88 Aligned_cols=68 Identities=10% Similarity=-0.056 Sum_probs=41.8
Q ss_pred HHHHHHHHHHHhcCCCEEEEEcCCcccccchhhhhhhCCCceEeeccChHhhhcccCcceEEecCCchhHHHHHH-----
Q 012893 288 AEVIALAEALEAIGFPFLWSFRGNAEEQLPKGFLERTKSYGKVVPWAPQLKILEHSSVCVFVTHCGWNSTIEGIT----- 362 (454)
Q Consensus 288 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~~~~~~nv~v~~~vp~~~ll~~~~~~~~I~HgG~gsv~eal~----- 362 (454)
..+..+...++..+..+.+........ . ..+ . ....... ++++|.-||=||+.|++.
T Consensus 44 ~~~~~i~~~l~~~g~~~~~~~t~~~~~-~-~~~-------------~-~~~~~~~--~d~vvv~GGDGTl~~v~~~l~~~ 105 (332)
T 2bon_A 44 LPLREAIMLLREEGMTIHVRVTWEKGD-A-ARY-------------V-EEARKFG--VATVIAGGGDGTINEVSTALIQC 105 (332)
T ss_dssp HHHHHHHHHHHTTTCCEEEEECCSTTH-H-HHH-------------H-HHHHHHT--CSEEEEEESHHHHHHHHHHHHHC
T ss_pred chHHHHHHHHHHcCCcEEEEEecCcch-H-HHH-------------H-HHHHhcC--CCEEEEEccchHHHHHHHHHhhc
Confidence 456678888888888776654332100 0 000 0 1111122 349999999999999853
Q ss_pred ---cCCCeeccccc
Q 012893 363 ---GGVPMVCRPVF 373 (454)
Q Consensus 363 ---~GvP~i~~P~~ 373 (454)
.++|+.++|..
T Consensus 106 ~~~~~~plgiiP~G 119 (332)
T 2bon_A 106 EGDDIPALGILPLG 119 (332)
T ss_dssp CSSCCCEEEEEECS
T ss_pred ccCCCCeEEEecCc
Confidence 57898899963
No 150
>2nxw_A Phenyl-3-pyruvate decarboxylase; thiamine pyrophosphate, asymmetric dimer of dimers, open ACT loops, lyase; HET: TPP; 1.50A {Azospirillum brasilense} PDB: 2q5j_A* 2q5l_A* 2q5o_A* 2q5q_A*
Probab=26.92 E-value=66 Score=32.07 Aligned_cols=81 Identities=16% Similarity=0.071 Sum_probs=45.3
Q ss_pred HHHHHHHHHHhcCCCEEEEEcCCcccccchhhhhhhCCCceEee------ccC--hHhhhcccCcceEEecCCch-----
Q 012893 289 EVIALAEALEAIGFPFLWSFRGNAEEQLPKGFLERTKSYGKVVP------WAP--QLKILEHSSVCVFVTHCGWN----- 355 (454)
Q Consensus 289 ~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~~~~~~nv~v~~------~vp--~~~ll~~~~~~~~I~HgG~g----- 355 (454)
..+.+++.|++.|.+.++...+.....+-+.+.+...-+..... +.- +...-.++ .++++|.|-|
T Consensus 23 ~a~~lv~~L~~~GV~~vfg~PG~~~~~l~~al~~~~~~~~i~~~~E~~Aa~~A~GyAr~tgkp--~v~~~TsGpG~~N~~ 100 (565)
T 2nxw_A 23 LAEALLRALKDRGAQAMFGIPGDFALPFFKVAEETQILPLHTLSHEPAVGFAADAAARYSSTL--GVAAVTYGAGAFNMV 100 (565)
T ss_dssp HHHHHHHHHHHTTCCCEEECCCGGGHHHHHHHHHHCSSCEEECSSHHHHHHHHHHHHHHHTSC--EEEEECTTHHHHTTH
T ss_pred HHHHHHHHHHHcCCCEEEECCCcchHHHHHHHHhCCCcEEEecCcHHHHHHHHHHHHHHhCCC--eEEEECCCCCHHHHH
Confidence 34566777777777777776665433333333221001111110 111 11112233 4899999966
Q ss_pred -hHHHHHHcCCCeeccc
Q 012893 356 -STIEGITGGVPMVCRP 371 (454)
Q Consensus 356 -sv~eal~~GvP~i~~P 371 (454)
.+.||-+.++|+|++-
T Consensus 101 ~gv~~A~~~~vPll~it 117 (565)
T 2nxw_A 101 NAVAGAYAEKSPVVVIS 117 (565)
T ss_dssp HHHHHHHHTTCCEEEEE
T ss_pred HHHHHHHhhCCCEEEEe
Confidence 8899999999999874
No 151
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=26.40 E-value=1e+02 Score=25.85 Aligned_cols=34 Identities=3% Similarity=0.010 Sum_probs=24.9
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHhhhcCCCcEEEEEEeCC
Q 012893 10 RRHVAVLAFPFGTHAAPLLDLVRRLSEAALEEEVTFSFFSTA 51 (454)
Q Consensus 10 ~~~il~~~~~~~GH~~p~l~la~~L~~~~~G~~h~V~~~~~~ 51 (454)
+++|+++ |+.|.+- ..|+++| .++| |+|+.++-.
T Consensus 4 m~~ilIt--GatG~iG--~~l~~~L--~~~g--~~V~~~~r~ 37 (227)
T 3dhn_A 4 VKKIVLI--GASGFVG--SALLNEA--LNRG--FEVTAVVRH 37 (227)
T ss_dssp CCEEEEE--TCCHHHH--HHHHHHH--HTTT--CEEEEECSC
T ss_pred CCEEEEE--cCCchHH--HHHHHHH--HHCC--CEEEEEEcC
Confidence 4677665 5555554 4678999 8899 999998764
No 152
>2q37_A OHCU decarboxylase; 2-OXO-4-hydroxy-4-carboxy-5-ureidoimidazoline, plant protein, lyase; HET: 3AL; 2.50A {Arabidopsis thaliana} SCOP: a.288.1.1
Probab=26.23 E-value=2.3e+02 Score=23.40 Aligned_cols=55 Identities=15% Similarity=0.023 Sum_probs=39.6
Q ss_pred hhHHHHHHHHhhceeecCcCCCCCHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHH
Q 012893 376 QALNQRIIETAWGIGVGVXGEKFTKDETVNALKQVLSSEEGKRMRENVGALKKLAF 431 (454)
Q Consensus 376 Q~~nA~~v~~~~G~G~~~~~~~~~~~~l~~av~~vl~~~~~~~~~~~a~~l~~~~~ 431 (454)
+..|+.+-++. |.=..+--...+.++|.+.+.+=|.|+...+.+..+.++.+..+
T Consensus 117 ~~LN~~Ye~kF-GfpFVi~v~G~s~~~IL~~l~~RL~N~~~~E~~~Al~Ev~kIa~ 171 (181)
T 2q37_A 117 AEWNVLYKKKF-GFIFIICASGRTHAEMLHALKERYENRPIVELEIAAMEQMKITE 171 (181)
T ss_dssp HHHHHHHHHHH-SSCCCCCCSSCCHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHc-CCeEEEEeCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Confidence 56799999999 87766644446889999999999988644456666665555433
No 153
>3qrx_B Melittin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 1bh1_A 2mlt_A
Probab=26.04 E-value=22 Score=18.46 Aligned_cols=17 Identities=24% Similarity=0.534 Sum_probs=14.0
Q ss_pred CchhHHHHHHcCCCeec
Q 012893 353 GWNSTIEGITGGVPMVC 369 (454)
Q Consensus 353 G~gsv~eal~~GvP~i~ 369 (454)
|.|++.-.|+.|.|.++
T Consensus 1 giGa~LKVLa~~LP~li 17 (26)
T 3qrx_B 1 GIGAVLKVLTTGLPALI 17 (26)
T ss_pred CchHHHHHHHccchHHH
Confidence 67888889999988764
No 154
>2qv7_A Diacylglycerol kinase DGKB; alpha-beta domain 1, beta sandwich domain 2, protein-ADP COM transferase; HET: ADP; 2.30A {Staphylococcus aureus} SCOP: e.52.1.2 PDB: 2qvl_A
Probab=25.75 E-value=82 Score=28.89 Aligned_cols=81 Identities=12% Similarity=-0.019 Sum_probs=46.8
Q ss_pred EEEEeeCCCCCCCHHHHHHHHHHHHhcCCCEEEEEcCCcccccchhhhhhhCCCceEeeccChHhhhcccCcceEEecCC
Q 012893 274 VIYISFGSMITPPRAEVIALAEALEAIGFPFLWSFRGNAEEQLPKGFLERTKSYGKVVPWAPQLKILEHSSVCVFVTHCG 353 (454)
Q Consensus 274 ~v~vs~Gs~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~~~~~~nv~v~~~vp~~~ll~~~~~~~~I~HgG 353 (454)
.|+++-.|-.......+..+...++..+..+.+........ ...+. ..... ..++++|.-||
T Consensus 28 ~vI~NP~sg~~~~~~~~~~i~~~L~~~g~~~~~~~t~~~~~--a~~~~--------------~~~~~--~~~d~vvv~GG 89 (337)
T 2qv7_A 28 RIIYNPTSGKEQFKRELPDALIKLEKAGYETSAYATEKIGD--ATLEA--------------ERAMH--ENYDVLIAAGG 89 (337)
T ss_dssp EEEECTTSTTSCHHHHHHHHHHHHHHTTEEEEEEECCSTTH--HHHHH--------------HHHTT--TTCSEEEEEEC
T ss_pred EEEECCCCCCCchHHHHHHHHHHHHHcCCeEEEEEecCcch--HHHHH--------------HHHhh--cCCCEEEEEcC
Confidence 44455444322233556778888888877665544322100 00110 11111 22359999999
Q ss_pred chhHHHHHH------cCCCeecccc
Q 012893 354 WNSTIEGIT------GGVPMVCRPV 372 (454)
Q Consensus 354 ~gsv~eal~------~GvP~i~~P~ 372 (454)
=||+.|++. .++|+.++|.
T Consensus 90 DGTv~~v~~~l~~~~~~~pl~iIP~ 114 (337)
T 2qv7_A 90 DGTLNEVVNGIAEKPNRPKLGVIPM 114 (337)
T ss_dssp HHHHHHHHHHHTTCSSCCEEEEEEC
T ss_pred chHHHHHHHHHHhCCCCCcEEEecC
Confidence 999999863 4689999996
No 155
>3lq1_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- 1-carboxylate synthase; menaquinone biosynthesis, sephchc synthase, structural genomics; 2.60A {Listeria monocytogenes}
Probab=25.74 E-value=1.6e+02 Score=29.33 Aligned_cols=78 Identities=17% Similarity=0.127 Sum_probs=49.6
Q ss_pred HHHHHHHHHhcCCCEEEEEcCCcccccchhhhhhhCCCceEeeccC-hH---------hhhcccCcceEEecCCch----
Q 012893 290 VIALAEALEAIGFPFLWSFRGNAEEQLPKGFLERTKSYGKVVPWAP-QL---------KILEHSSVCVFVTHCGWN---- 355 (454)
Q Consensus 290 ~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~~~~~~nv~v~~~vp-~~---------~ll~~~~~~~~I~HgG~g---- 355 (454)
.+.+++.|.+.|.+.|+...+.....+-+.+.+. +.+..+.-.. +. .+-.+ .++++++.|-|
T Consensus 14 a~~lv~~L~~~GV~~vFg~PG~~~~~l~dal~~~--~~i~~i~~~hE~~Aa~aAdGyAr~tG~--pgv~~~TsGpG~~N~ 89 (578)
T 3lq1_A 14 LAAFIEELVQAGVKEAIISPGSRSTPLALMMAEH--PILKIYVDVDERSAGFFALGLAKASKR--PVVLLCTSGTAAANY 89 (578)
T ss_dssp HHHHHHHHHHTTCCEEEECCCTTTHHHHHHHHHC--SSCEEEECSSHHHHHHHHHHHHHHHCC--CEEEEECSSHHHHTT
T ss_pred HHHHHHHHHHcCCCEEEECCCCccHHHHHHHHhC--CCceEEEecCcHHHHHHHHHHHHhhCC--CEEEEECCchhhhhh
Confidence 3567888888898888888776543333443321 2344332222 11 12222 35899999976
Q ss_pred --hHHHHHHcCCCeeccc
Q 012893 356 --STIEGITGGVPMVCRP 371 (454)
Q Consensus 356 --sv~eal~~GvP~i~~P 371 (454)
.+.||-+.++|+|++-
T Consensus 90 ~~gia~A~~d~vPll~it 107 (578)
T 3lq1_A 90 FPAVAEANLSQIPLIVLT 107 (578)
T ss_dssp HHHHHHHHHTTCCEEEEE
T ss_pred hHHHHHHHhcCCCeEEEe
Confidence 7889999999999874
No 156
>2pn1_A Carbamoylphosphate synthase large subunit; ZP_00538348.1, ATP-grAsp domain, carbamoylphosphate synthase subunit (split gene in MJ); 2.00A {Exiguobacterium sibiricum}
Probab=25.47 E-value=2e+02 Score=25.74 Aligned_cols=33 Identities=15% Similarity=0.058 Sum_probs=21.8
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHhhhcC-CCcEEEEEEeC
Q 012893 9 QRRHVAVLAFPFGTHAAPLLDLVRRLSEAAL-EEEVTFSFFST 50 (454)
Q Consensus 9 ~~~~il~~~~~~~GH~~p~l~la~~L~~~~~-G~~h~V~~~~~ 50 (454)
++++|+++..++. +.+++.| ++. |. ++|..+..
T Consensus 3 ~~~~Ili~g~g~~------~~l~~~l--~~~~~~-~~v~~~d~ 36 (331)
T 2pn1_A 3 QKPHLLITSAGRR------AKLVEYF--VKEFKT-GRVSTADC 36 (331)
T ss_dssp TCCEEEEESCTTC------HHHHHHH--HHHCCS-SEEEEEES
T ss_pred ccceEEEecCCch------HHHHHHH--HHhcCC-CEEEEEeC
Confidence 4579999866554 4788999 654 31 56666544
No 157
>2o8i_A AGR_C_4230P, hypothetical protein ATU2327; agrobacterium tumefaciens STR. C58, structural GENO PSI-2, protein structure initiative; 2.60A {Agrobacterium tumefaciens str} SCOP: a.288.1.1
Probab=25.37 E-value=2.6e+02 Score=22.58 Aligned_cols=55 Identities=15% Similarity=0.316 Sum_probs=40.3
Q ss_pred hhHHHHHHHHhhceeecCcCCCCCHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHH
Q 012893 376 QALNQRIIETAWGIGVGVXGEKFTKDETVNALKQVLSSEEGKRMRENVGALKKLAF 431 (454)
Q Consensus 376 Q~~nA~~v~~~~G~G~~~~~~~~~~~~l~~av~~vl~~~~~~~~~~~a~~l~~~~~ 431 (454)
+..|+.+-++. |.=..+--...+.++|.+.+.+=+.|+...+.+..+.++.+..+
T Consensus 101 ~~lN~~Ye~kF-GfpFvi~v~g~~~~~Il~~l~~Rl~nd~~~E~~~a~~e~~kIa~ 155 (165)
T 2o8i_A 101 TQLNSAYTEKF-GFPFIIAVKGLNRHDILSAFDTRIDNNAAQEFATATGQVEKIAW 155 (165)
T ss_dssp HHHHHHHHHHH-SSCCCCCCTTCCHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHc-CCeeEeeeCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Confidence 56799999999 87766543346889999999998988644566666666655443
No 158
>3ahc_A Phosphoketolase, xylulose 5-phosphate/fructose 6-phosphate phospho; thiamine diphosphate-dependent enzyme, alpha-beta fold; HET: TPP 2PE; 1.70A {Bifidobacterium breve} PDB: 3ahd_A* 3ahe_A* 3ahf_A* 3ahj_A* 3ahi_A* 3ahh_A* 3ahg_A* 3ai7_A*
Probab=25.31 E-value=5.2e+02 Score=27.06 Aligned_cols=142 Identities=13% Similarity=0.115 Sum_probs=68.4
Q ss_pred CcEEEEeeCCCCCCCHHHHHHHHHHHHhcCCCEEEEEcCCcccccchhhhhhhCCCceEeeccChHhhhcccCcceEEec
Q 012893 272 ASVIYISFGSMITPPRAEVIALAEALEAIGFPFLWSFRGNAEEQLPKGFLERTKSYGKVVPWAPQLKILEHSSVCVFVTH 351 (454)
Q Consensus 272 ~~~v~vs~Gs~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~~~~~~nv~v~~~vp~~~ll~~~~~~~~I~H 351 (454)
.-+++++.||... ....+..+.|++.|.++-++-=.......|.. ++.....---...++..-.-.+++.|
T Consensus 660 ~DVvLiAtGsev~---~EAL~AA~~L~~~GI~vRVVsm~~lf~lqp~~------~~~~~ls~~~~~~l~T~e~h~i~~~g 730 (845)
T 3ahc_A 660 VQVVLASAGDVPT---QELMAASDALNKMGIKFKVVNVVDLLKLQSRE------NNDEALTDEEFTELFTADKPVLFAYH 730 (845)
T ss_dssp CSEEEEEESHHHH---HHHHHHHHHHHHTTCCEEEEEECBGGGGSCTT------TCTTSCCHHHHHHHHCSSSCEEEEES
T ss_pred CCEEEEEeccHHH---HHHHHHHHHHHhCCCCEEEEEeCCCCccCCcc------ccccccCHHHhCcEeecCCcceeeec
Confidence 4599999997741 11344556666667655444222211111110 11111111112344432221144467
Q ss_pred CCchhHHHHHHcC-C--Cee--ccccccchhHHHHHHHHhhceeecCcCCCCCHHHHHHHHHHHhcCchHHHHHHHHHHH
Q 012893 352 CGWNSTIEGITGG-V--PMV--CRPVFADQALNQRIIETAWGIGVGVXGEKFTKDETVNALKQVLSSEEGKRMRENVGAL 426 (454)
Q Consensus 352 gG~gsv~eal~~G-v--P~i--~~P~~~DQ~~nA~~v~~~~G~G~~~~~~~~~~~~l~~av~~vl~~~~~~~~~~~a~~l 426 (454)
|--+.|.|.++-. . |+- .+|-.++--.-...++.. .++.+.|.+++.+++.......+++..+..
T Consensus 731 GlgsaV~ell~~r~~~~~l~v~G~~d~G~tgtp~eLl~~~----------gld~~~Iv~~a~~~l~~~~~~~~~~~~~~~ 800 (845)
T 3ahc_A 731 SYAQDVRGLIYDRPNHDNFHVVGYKEQGSTTTPFDMVRVN----------DMDRYALQAAALKLIDADKYADKIDELNAF 800 (845)
T ss_dssp SCHHHHHHHTTTSTTGGGEEEECCCSCCCSCCHHHHHHTT----------TCSHHHHHHHHHHHHHTTTTHHHHHHHHHH
T ss_pred CcHHHHHHHHHhCCCCceEEEEeccCCCCCCCHHHHHHHh----------CcCHHHHHHHHHHHcchhhHHHHHHHHHHH
Confidence 7667777777765 3 343 333322211223333333 378999999998888643333444444444
Q ss_pred HHHHHH
Q 012893 427 KKLAFK 432 (454)
Q Consensus 427 ~~~~~~ 432 (454)
..+.++
T Consensus 801 ~~~~~~ 806 (845)
T 3ahc_A 801 RKKAFQ 806 (845)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 444443
No 159
>3hww_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- carboxylate synthase; menaquinone, THDP, Mg, vitamin K2, carboxylase, magnesium; HET: AKG; 1.95A {Escherichia coli k-12} PDB: 3flm_A* 3hwx_A* 2jlc_A* 2jla_A*
Probab=25.04 E-value=1.3e+02 Score=29.84 Aligned_cols=77 Identities=17% Similarity=0.098 Sum_probs=45.6
Q ss_pred HHHHHHHHhcCCCEEEEEcCCcccccchhhhhhhCCCceEeeccC-h---------HhhhcccCcceEEecCCch-----
Q 012893 291 IALAEALEAIGFPFLWSFRGNAEEQLPKGFLERTKSYGKVVPWAP-Q---------LKILEHSSVCVFVTHCGWN----- 355 (454)
Q Consensus 291 ~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~~~~~~nv~v~~~vp-~---------~~ll~~~~~~~~I~HgG~g----- 355 (454)
+.+++.|++.|.+.|+...+.....+-+.+.+. +.+..+.-.. + ..+-.+ .++++++.|-|
T Consensus 12 ~~lv~~L~~~GV~~vFg~PG~~~~~l~dal~~~--~~i~~i~~~hE~~Aa~~AdGyAr~tG~--pgv~~~TsGpG~~N~~ 87 (556)
T 3hww_A 12 AVILEALTRHGVRHICIAPGSRSTLLTLAAAEN--SAFIHHTHFDERGLGHLALGLAKVSKQ--PVAVIVTSGTAVANLY 87 (556)
T ss_dssp HHHHHHHHTTTCCEEEECCCTTSHHHHHHHHHC--TTCEEEECSCHHHHHHHHHHHHHHHCS--CEEEEECSSHHHHTTH
T ss_pred HHHHHHHHHCCCCEEEEcCCCCcHHHHHHHhhC--CCceEEEecCCcHHHHHHHHHHHhhCC--CEEEEECCCcHHHhhh
Confidence 456777777777777776665433333333221 2233222111 1 111122 35899999976
Q ss_pred -hHHHHHHcCCCeeccc
Q 012893 356 -STIEGITGGVPMVCRP 371 (454)
Q Consensus 356 -sv~eal~~GvP~i~~P 371 (454)
.+.||-+.++|+|++-
T Consensus 88 ~gia~A~~d~vPll~it 104 (556)
T 3hww_A 88 PALIEAGLTGEKLILLT 104 (556)
T ss_dssp HHHHHHHHHCCCEEEEE
T ss_pred HHHHHHHHhCCCeEEEe
Confidence 7899999999999874
No 160
>3o7i_A OHCU decarboxylase; lyase; 1.50A {Klebsiella pneumoniae subsp} PDB: 3o7h_A 3o7j_A* 3o7k_A
Probab=24.71 E-value=2.5e+02 Score=23.37 Aligned_cols=55 Identities=16% Similarity=0.222 Sum_probs=41.1
Q ss_pred hhHHHHHHHHhhceeecCcCCCCCHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHH
Q 012893 376 QALNQRIIETAWGIGVGVXGEKFTKDETVNALKQVLSSEEGKRMRENVGALKKLAF 431 (454)
Q Consensus 376 Q~~nA~~v~~~~G~G~~~~~~~~~~~~l~~av~~vl~~~~~~~~~~~a~~l~~~~~ 431 (454)
+..|+.+-++. |.-..+--...+.++|.+.+.+=|.|+...+.+..+.++.+..+
T Consensus 126 ~~LN~~Ye~kF-GfpFVi~v~G~s~~~IL~~l~~Rl~nd~e~E~~~Al~Ev~kIa~ 180 (189)
T 3o7i_A 126 REGNARYEARF-GRVFLIRAKGRSGEEILQALTRRLQHTADEEVAEALAQLREITM 180 (189)
T ss_dssp HHHHHHHHHHH-SSCCCCCCTTCCHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHC-CCceEEecCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Confidence 56799999999 98866644446899999999999988644566666666655543
No 161
>1v5e_A Pyruvate oxidase; oxidoreductase, flavoprotein; HET: FAD; 1.60A {Aerococcus viridans} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 2dji_A* 1v5f_A* 1v5g_A*
Probab=24.32 E-value=63 Score=32.44 Aligned_cols=81 Identities=16% Similarity=0.156 Sum_probs=48.0
Q ss_pred HHHHHHHHHhcCCCEEEEEcCCcccccchhhhhhhCCCceEeeccC-hHhh-------hcccCcceEEecCC------ch
Q 012893 290 VIALAEALEAIGFPFLWSFRGNAEEQLPKGFLERTKSYGKVVPWAP-QLKI-------LEHSSVCVFVTHCG------WN 355 (454)
Q Consensus 290 ~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~~~~~~nv~v~~~vp-~~~l-------l~~~~~~~~I~HgG------~g 355 (454)
.+.+++.|.+.|.+.++...+.....+-+.+.+. .+.+..+.-.. +.+. ...-...++++|.| .+
T Consensus 7 a~~lv~~L~~~GV~~vfg~PG~~~~~l~~al~~~-~~~i~~i~~~~E~~Aa~~A~GyAr~tgk~~v~~~tsGpG~~N~~~ 85 (590)
T 1v5e_A 7 GLAVMKILESWGADTIYGIPSGTLSSLMDAMGEE-ENNVKFLQVKHEEVGAMAAVMQSKFGGNLGVTVGSGGPGASHLIN 85 (590)
T ss_dssp HHHHHHHHHHTTCCEEEECCCTTTHHHHTTSSST-TCCCEEEECSSHHHHHHHHHHHHHTTCCCCEEEECTTHHHHTTHH
T ss_pred HHHHHHHHHHcCCCEEEEecCCchHHHHHHHHhc-CCCCeEEeeCCHHHHHHHHHHHHHHHCCCEEEEeCcChHHHHHHH
Confidence 3567888888888888888776533232222211 01233332221 1111 11112349999999 56
Q ss_pred hHHHHHHcCCCeeccc
Q 012893 356 STIEGITGGVPMVCRP 371 (454)
Q Consensus 356 sv~eal~~GvP~i~~P 371 (454)
.+.+|.+.++|+|++-
T Consensus 86 gl~~A~~~~vPll~It 101 (590)
T 1v5e_A 86 GLYDAAMDNIPVVAIL 101 (590)
T ss_dssp HHHHHHHHTCCEEEEE
T ss_pred HHHHHHhcCCCEEEEc
Confidence 8999999999999874
No 162
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=24.29 E-value=66 Score=25.43 Aligned_cols=35 Identities=0% Similarity=-0.077 Sum_probs=25.9
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHhhhcCCCcEEEEEEeCC
Q 012893 8 TQRRHVAVLAFPFGTHAAPLLDLVRRLSEAALEEEVTFSFFSTA 51 (454)
Q Consensus 8 ~~~~~il~~~~~~~GH~~p~l~la~~L~~~~~G~~h~V~~~~~~ 51 (454)
.+.++|+++-.+..| ..+++.| .+.| ++|+++...
T Consensus 17 ~~~~~v~IiG~G~iG-----~~la~~L--~~~g--~~V~vid~~ 51 (155)
T 2g1u_A 17 QKSKYIVIFGCGRLG-----SLIANLA--SSSG--HSVVVVDKN 51 (155)
T ss_dssp CCCCEEEEECCSHHH-----HHHHHHH--HHTT--CEEEEEESC
T ss_pred cCCCcEEEECCCHHH-----HHHHHHH--HhCC--CeEEEEECC
Confidence 445799988654444 4578899 8899 999998764
No 163
>3ox4_A Alcohol dehydrogenase 2; iron, NAD, oxidoreductase; HET: NAD; 2.00A {Zymomonas mobilis} PDB: 3owo_A*
Probab=24.03 E-value=34 Score=32.28 Aligned_cols=41 Identities=22% Similarity=0.075 Sum_probs=21.6
Q ss_pred hhccCCCCcEEEEeeCCCCCCCHHHHHHHHHHHHhcCCCEEEE
Q 012893 265 WLNEHENASVIYISFGSMITPPRAEVIALAEALEAIGFPFLWS 307 (454)
Q Consensus 265 ~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~~~~~~~~~~i~~ 307 (454)
++...+.+.++.|+-++.. .......+.+.+++.+..+.+.
T Consensus 25 ~~~~~g~~~~liVtd~~~~--~~g~~~~v~~~L~~~gi~~~~~ 65 (383)
T 3ox4_A 25 DLNGSGFKNALIVSDAFMN--KSGVVKQVADLLKAQGINSAVY 65 (383)
T ss_dssp TTTTSCCCEEEEEEEHHHH--HTTHHHHHHHHHHTTTCEEEEE
T ss_pred HHHHcCCCEEEEEECCchh--hCchHHHHHHHHHHcCCeEEEE
Confidence 3433343345555554332 1124567777888777766443
No 164
>3uhj_A Probable glycerol dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.34A {Sinorhizobium meliloti}
Probab=23.84 E-value=1.2e+02 Score=28.48 Aligned_cols=91 Identities=12% Similarity=0.099 Sum_probs=43.3
Q ss_pred ccchhccCCCCcEEEEeeCCCCCCCHHHHHHHHHHHHhcCCCEEEEEcCCcccccchhhhhhhCCCceEeeccChHhhhc
Q 012893 262 CLPWLNEHENASVIYISFGSMITPPRAEVIALAEALEAIGFPFLWSFRGNAEEQLPKGFLERTKSYGKVVPWAPQLKILE 341 (454)
Q Consensus 262 ~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~~~~~~nv~v~~~vp~~~ll~ 341 (454)
+.+++...+ +.++.|+-.+.. ......+.+.+++ +..+++..-.... . .+... .-...+.
T Consensus 44 l~~~l~~~g-~r~liVtd~~~~---~~~~~~v~~~L~~-g~~~~~~~~~~~p-~-~~~v~-------------~~~~~~~ 103 (387)
T 3uhj_A 44 LAAYLAPLG-KRALVLIDRVLF---DALSERIGKSCGD-SLDIRFERFGGEC-C-TSEIE-------------RVRKVAI 103 (387)
T ss_dssp THHHHGGGC-SEEEEEECTTTH---HHHHHHC-------CCEEEEEECCSSC-S-HHHHH-------------HHHHHHH
T ss_pred HHHHHHHcC-CEEEEEECchHH---HHHHHHHHHHHHc-CCCeEEEEcCCCC-C-HHHHH-------------HHHHHHh
Confidence 334555544 345555544432 2355667777877 7665332221111 0 01110 0112223
Q ss_pred ccCcceEEecCCchhHHHH-----HHcCCCeeccccc
Q 012893 342 HSSVCVFVTHCGWNSTIEG-----ITGGVPMVCRPVF 373 (454)
Q Consensus 342 ~~~~~~~I~HgG~gsv~ea-----l~~GvP~i~~P~~ 373 (454)
...++++|-=|| ||+..+ ...|+|+|.+|..
T Consensus 104 ~~~~d~IIavGG-Gs~~D~AK~iA~~~~~p~i~IPTT 139 (387)
T 3uhj_A 104 EHGSDILVGVGG-GKTADTAKIVAIDTGARIVIAPTI 139 (387)
T ss_dssp HHTCSEEEEESS-HHHHHHHHHHHHHTTCEEEECCSS
T ss_pred hcCCCEEEEeCC-cHHHHHHHHHHHhcCCCEEEecCc
Confidence 334559999998 666554 5679999999985
No 165
>2wvg_A PDC, pyruvate decarboxylase; thiamine diphosphate, lyase, flavoprotein, metal-binding, alcohol fermentation; HET: TPU; 1.75A {Zymomonas mobilis} PDB: 2wva_A* 2wvh_A 3oe1_A* 1zpd_A*
Probab=23.77 E-value=1e+02 Score=30.64 Aligned_cols=77 Identities=16% Similarity=0.113 Sum_probs=44.5
Q ss_pred HHHHHHHHhcCCCEEEEEcCCcccccchhhhhhhCCCceEeeccC---------hHhhhcccCcceEEecCCch------
Q 012893 291 IALAEALEAIGFPFLWSFRGNAEEQLPKGFLERTKSYGKVVPWAP---------QLKILEHSSVCVFVTHCGWN------ 355 (454)
Q Consensus 291 ~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~~~~~~nv~v~~~vp---------~~~ll~~~~~~~~I~HgG~g------ 355 (454)
+.+++.|.+.|.+.++...+.....+-+.+.+. +.+..+.-.. -.+-+.. ..++++|.|-|
T Consensus 7 ~~l~~~L~~~GV~~vfg~PG~~~~~l~~al~~~--~~i~~i~~~~E~~Aa~~A~Gyar~tg--~~v~~~TsGpG~~N~~~ 82 (568)
T 2wvg_A 7 TYLAERLVQIGLKHHFAVAGDYNLVLLDNLLLN--KNMEQVYCCNELNCGFSAEGYARAKG--AAAAVVTYSVGALSAFD 82 (568)
T ss_dssp HHHHHHHHHTTCSEEEECCCTTTHHHHHHHHTC--TTSEEEECSSHHHHHHHHHHHHHHHS--CEEEEECTTTTHHHHHH
T ss_pred HHHHHHHHHcCCCEEEeCCCCccHHHHHHHhcc--CCceEeccCcHHHHHHHHHHHHHhhC--CeEEEEeCCCCHHHHHH
Confidence 456677777777777776665433333333211 1233322111 1111222 35889999974
Q ss_pred hHHHHHHcCCCeeccc
Q 012893 356 STIEGITGGVPMVCRP 371 (454)
Q Consensus 356 sv~eal~~GvP~i~~P 371 (454)
.+.||.+.++|+|++-
T Consensus 83 gia~A~~~~vPll~it 98 (568)
T 2wvg_A 83 AIGGAYAENLPVILIS 98 (568)
T ss_dssp HHHHHHHTTCCEEEEE
T ss_pred HHHHHhhhCCCEEEEe
Confidence 7889999999999874
No 166
>3tla_A MCCF; serine protease, hydrolase; 1.20A {Escherichia coli} PDB: 3tle_A* 3tlg_A 3tlb_A* 3tlc_A* 3tlz_A* 3tly_A
Probab=23.66 E-value=84 Score=29.46 Aligned_cols=72 Identities=13% Similarity=0.201 Sum_probs=51.0
Q ss_pred CHHHHHHHHHHHHhcCCCEEEEEcCCcccccchhhhhhhCCCceEeeccChHhhhcccCcceEEecCCchhHHHHHH--c
Q 012893 286 PRAEVIALAEALEAIGFPFLWSFRGNAEEQLPKGFLERTKSYGKVVPWAPQLKILEHSSVCVFVTHCGWNSTIEGIT--G 363 (454)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~~~~~~nv~v~~~vp~~~ll~~~~~~~~I~HgG~gsv~eal~--~ 363 (454)
+......+.+++.+...+.||.+.+.. +-.++.++++...+-+++. .||-.+-..++.-|++ .
T Consensus 94 d~~Ra~dL~~af~Dp~i~aI~~~rGGy-------------ga~rlLp~LD~~~i~~~PK--~fiGySDiTaL~~ai~~k~ 158 (371)
T 3tla_A 94 IKERAQEFNELVYNPDITCIMSTIGGD-------------NSNSLLPFLDYDAIIANPK--IIIGYSDTTALLAGIYAKT 158 (371)
T ss_dssp HHHHHHHHHHHHTCTTEEEEEESCCCS-------------CGGGGGGGSCHHHHHHSCC--EEEECGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhCCCCCEEEEccccc-------------cHHHHHhhcChhhHHhCCc--EEEEechHHHHHHHHHHHc
Confidence 456778899999999999999988764 2223456666666666665 7777777777777665 4
Q ss_pred CCCeecccc
Q 012893 364 GVPMVCRPV 372 (454)
Q Consensus 364 GvP~i~~P~ 372 (454)
|++-+--|.
T Consensus 159 Gl~T~hGP~ 167 (371)
T 3tla_A 159 GLITFYGPA 167 (371)
T ss_dssp CBCEEECCC
T ss_pred CCEEEECcc
Confidence 777666664
No 167
>3lyu_A Putative hydrogenase; the C-terminal has AN alpha-beta fold, structural genomics, PSI-2, protein structure initiative; 2.30A {Pyrococcus furiosus}
Probab=23.43 E-value=51 Score=25.88 Aligned_cols=37 Identities=3% Similarity=0.028 Sum_probs=29.4
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHhhhcCCCcEEEEEEeCCCc
Q 012893 10 RRHVAVLAFPFGTHAAPLLDLVRRLSEAALEEEVTFSFFSTAQS 53 (454)
Q Consensus 10 ~~~il~~~~~~~GH~~p~l~la~~L~~~~~G~~h~V~~~~~~~~ 53 (454)
..+++++..++. +.|++.+++.| .++| .+|+++ ....
T Consensus 18 ~~~~llIaGG~G--iaPl~sm~~~l--~~~~--~~v~l~-g~R~ 54 (142)
T 3lyu_A 18 FGKILAIGAYTG--IVEVYPIAKAW--QEIG--NDVTTL-HVTF 54 (142)
T ss_dssp CSEEEEEEETTH--HHHHHHHHHHH--HHTT--CEEEEE-EEEE
T ss_pred CCeEEEEECcCc--HHHHHHHHHHH--HhcC--CcEEEE-EeCC
Confidence 357888877653 89999999999 7889 899988 5443
No 168
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=23.36 E-value=35 Score=26.44 Aligned_cols=34 Identities=24% Similarity=0.162 Sum_probs=24.6
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHhhhcCCCcEEEEEEeCC
Q 012893 9 QRRHVAVLAFPFGTHAAPLLDLVRRLSEAALEEEVTFSFFSTA 51 (454)
Q Consensus 9 ~~~~il~~~~~~~GH~~p~l~la~~L~~~~~G~~h~V~~~~~~ 51 (454)
.+.||+++-.+ .+ -..+++.| .++| |+|+++...
T Consensus 5 ~~~~v~I~G~G---~i--G~~la~~L--~~~g--~~V~~id~~ 38 (141)
T 3llv_A 5 GRYEYIVIGSE---AA--GVGLVREL--TAAG--KKVLAVDKS 38 (141)
T ss_dssp -CCSEEEECCS---HH--HHHHHHHH--HHTT--CCEEEEESC
T ss_pred CCCEEEEECCC---HH--HHHHHHHH--HHCC--CeEEEEECC
Confidence 35688888654 33 35689999 8899 999988753
No 169
>2vk8_A Pyruvate decarboxylase isozyme 1; asymmetric active sites, phenylalanine catabolism, tryptophan catabolism, thiamine pyrophosphate; HET: TPP; 1.42A {Saccharomyces cerevisiae} PDB: 1qpb_A* 2vk1_A* 2w93_A* 1pyd_A* 1pvd_A* 2vk4_A* 2vjy_A* 2g1i_A*
Probab=23.34 E-value=1.1e+02 Score=30.23 Aligned_cols=78 Identities=14% Similarity=0.085 Sum_probs=48.4
Q ss_pred HHHHHHHHHhcCCCEEEEEcCCcccccchhhhhhhCCCceEeeccC---------hHhhhcccCcceEEecCC------c
Q 012893 290 VIALAEALEAIGFPFLWSFRGNAEEQLPKGFLERTKSYGKVVPWAP---------QLKILEHSSVCVFVTHCG------W 354 (454)
Q Consensus 290 ~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~~~~~~nv~v~~~vp---------~~~ll~~~~~~~~I~HgG------~ 354 (454)
.+.+++.|++.|.+.++...+.....+-+.+.+. +.+..+.-.. -.+-+.. ..+++++.| .
T Consensus 7 a~~l~~~L~~~GV~~vfg~PG~~~~~l~~al~~~--~~i~~v~~~~E~~Aa~~A~Gyar~tg--~~v~~~TsGpG~~N~~ 82 (563)
T 2vk8_A 7 GKYLFERLKQVNVNTVFGLPGDFNLSLLDKIYEV--EGMRWAGNANELNAAYAADGYARIKG--MSCIITTFGVGELSAL 82 (563)
T ss_dssp HHHHHHHHHHTTCCEEEECCCGGGHHHHHGGGGS--TTCEECCCSSHHHHHHHHHHHHHHHS--CEEEEEETTHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEEcCCcchHHHHHHHhhc--CCceEEccCchHHHHHHHHHHHHhhC--CcEEEEcCCCcHHHHH
Confidence 3567888888898888888876543333333211 2233332111 1111222 458999999 4
Q ss_pred hhHHHHHHcCCCeeccc
Q 012893 355 NSTIEGITGGVPMVCRP 371 (454)
Q Consensus 355 gsv~eal~~GvP~i~~P 371 (454)
+.+.||.+.++|+|++-
T Consensus 83 ~gia~A~~~~~Pll~it 99 (563)
T 2vk8_A 83 NGIAGSYAEHVGVLHVV 99 (563)
T ss_dssp HHHHHHHHHTCCEEEEE
T ss_pred HHHHHHHhhCCCEEEEE
Confidence 57999999999999874
No 170
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=23.12 E-value=2e+02 Score=21.96 Aligned_cols=48 Identities=15% Similarity=0.090 Sum_probs=31.7
Q ss_pred cCCCeeccccccchhHHHHHHHHhhceeecCcCCCCCHHHHHHHHHHHhcC
Q 012893 363 GGVPMVCRPVFADQALNQRIIETAWGIGVGVXGEKFTKDETVNALKQVLSS 413 (454)
Q Consensus 363 ~GvP~i~~P~~~DQ~~nA~~v~~~~G~G~~~~~~~~~~~~l~~av~~vl~~ 413 (454)
..+|+|++--..+ ........+. |+--.+.. ..+.++|..+|+.++..
T Consensus 74 ~~~pii~ls~~~~-~~~~~~~~~~-g~~~~l~k-P~~~~~L~~~i~~~~~~ 121 (155)
T 1qkk_A 74 PDLPMILVTGHGD-IPMAVQAIQD-GAYDFIAK-PFAADRLVQSARRAEEK 121 (155)
T ss_dssp TTSCEEEEECGGG-HHHHHHHHHT-TCCEEEES-SCCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCC-hHHHHHHHhc-CCCeEEeC-CCCHHHHHHHHHHHHHH
Confidence 4788887744333 3344455556 76555543 36899999999999865
No 171
>2pgn_A Cyclohexane-1,2-dione hydrolase (CDH); three alpha/beta domains; HET: P6G FAD TPP; 1.20A {Azoarcus SP} PDB: 2pgo_A*
Probab=22.92 E-value=1.1e+02 Score=30.73 Aligned_cols=79 Identities=19% Similarity=0.144 Sum_probs=45.7
Q ss_pred HHHHHHHHHhcCCCEEEEEcCCcccccchhhhhhhCCCceEeec--------cC--hHhhhcccCcceEEecCCch----
Q 012893 290 VIALAEALEAIGFPFLWSFRGNAEEQLPKGFLERTKSYGKVVPW--------AP--QLKILEHSSVCVFVTHCGWN---- 355 (454)
Q Consensus 290 ~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~~~~~~nv~v~~~--------vp--~~~ll~~~~~~~~I~HgG~g---- 355 (454)
.+.+++.|.+.|.+.|+...+.....+-+.+.+.. +.+..+.- +- +..+-.++. ++++|.|-|
T Consensus 7 a~~l~~~L~~~GV~~vfg~PG~~~~~l~~al~~~~-~~i~~v~~~hE~~Aa~~A~GyAr~tg~p~--v~~~TsGpG~~N~ 83 (589)
T 2pgn_A 7 ADLIVEALEEYGTEQVVGFIGHTSHFVADAFSKSH-LGKRVINPATELGGAWMVNGYNYVKDRSA--AVGAWHCVGNLLL 83 (589)
T ss_dssp HHHHHHHHHHTTCCEEEEECSGGGHHHHHHHHTST-TSTTCBCCSSHHHHHHHHHHHHHHHTSCC--EEEEEEGGGGGGC
T ss_pred HHHHHHHHHHcCCCEEEEecCCchHHHHHHHHhcC-CCCeEEEeCcHHHHHHHHHHHHHHHCCCE--EEEEecCchHHHH
Confidence 34677777777877777777765333333332210 11222211 11 111222344 899999865
Q ss_pred --hHHHHHHcCCCeeccc
Q 012893 356 --STIEGITGGVPMVCRP 371 (454)
Q Consensus 356 --sv~eal~~GvP~i~~P 371 (454)
.+.||-+.++|+|++-
T Consensus 84 ~~gv~~A~~~~vPll~it 101 (589)
T 2pgn_A 84 HAAMQEARTGRIPAVHIG 101 (589)
T ss_dssp HHHHHHHHHTTCCEEEEE
T ss_pred HHHHHHHHhcCCCEEEEe
Confidence 7889999999999873
No 172
>3kkl_A Probable chaperone protein HSP33; peptidase, heat shock protein, hydrolase, protease, stress response; 2.03A {Saccharomyces cerevisiae} PDB: 3mii_A*
Probab=22.57 E-value=1.1e+02 Score=26.54 Aligned_cols=38 Identities=8% Similarity=0.132 Sum_probs=28.0
Q ss_pred CcEEEEEcCCCcc-----------CHHHHHHHHHHHhhhcCCCcEEEEEEeCC
Q 012893 10 RRHVAVLAFPFGT-----------HAAPLLDLVRRLSEAALEEEVTFSFFSTA 51 (454)
Q Consensus 10 ~~~il~~~~~~~G-----------H~~p~l~la~~L~~~~~G~~h~V~~~~~~ 51 (454)
|.|||++.....+ ...=++.....| ++.| ++|++++..
T Consensus 3 m~kvlivlt~~~~~~~~~g~~tG~~~~E~~~p~~~l--~~aG--~~V~iaS~~ 51 (244)
T 3kkl_A 3 PKRALISLTSYHGPFYKDGAKTGVFVVEILRSFDTF--EKHG--FEVDFVSET 51 (244)
T ss_dssp CCEEEEECCCCCCCCSTTSCCCCBCHHHHHHHHHHH--HTTT--CEEEEEESS
T ss_pred CCEEEEEECCCCcccCCCCCcCcccHHHHHHHHHHH--HHCC--CEEEEEeCC
Confidence 4688888775322 234566778889 8999 999999974
No 173
>1g63_A Epidermin modifying enzyme EPID; alpha, beta protein, rossmann like fold, oxidoreductase; HET: FMN; 2.50A {Staphylococcus epidermidis} SCOP: c.34.1.1 PDB: 1g5q_A*
Probab=22.51 E-value=3.2e+02 Score=22.38 Aligned_cols=112 Identities=12% Similarity=0.061 Sum_probs=66.1
Q ss_pred EEEEeeCCCCCCCHHHHHHHHHHHHhcCCCEEEEEcCCcccccchhhhhhhCCCceEee-c----cChHhhhcccCcceE
Q 012893 274 VIYISFGSMITPPRAEVIALAEALEAIGFPFLWSFRGNAEEQLPKGFLERTKSYGKVVP-W----APQLKILEHSSVCVF 348 (454)
Q Consensus 274 ~v~vs~Gs~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~~~~~~nv~v~~-~----vp~~~ll~~~~~~~~ 348 (454)
+++.-.||.... ....+++.+.+.++.+-++........+.....+...++ ..+ | +.+-.+-..++ .++
T Consensus 5 IllgvTGs~aa~---k~~~l~~~L~~~g~~V~vv~T~~A~~fi~~~~l~~l~~~--~~d~~~~~~~~hi~l~~~aD-~~v 78 (181)
T 1g63_A 5 LLICATASINVI---NINHYIVELKQHFDEVNILFSPSSKNFINTDVLKLFCDN--LYDEIKDPLLNHINIVENHE-YIL 78 (181)
T ss_dssp EEEEECSCGGGG---GHHHHHHHHTTTSSCEEEEECGGGGGTSCGGGGGGTSSC--EECTTTCTTCCHHHHHHTCS-EEE
T ss_pred EEEEEECHHHHH---HHHHHHHHHHHCCCEEEEEEchhHHHHHHHHHHHHHhCC--cccccCCCCCccccccccCC-EEE
Confidence 455555555432 334566777777877777766654333333223334455 332 2 34555555566 478
Q ss_pred EecCCchhHH-------------HHHHcCCCeeccccc----cch---hHHHHHHHHhhceeec
Q 012893 349 VTHCGWNSTI-------------EGITGGVPMVCRPVF----ADQ---ALNQRIIETAWGIGVG 392 (454)
Q Consensus 349 I~HgG~gsv~-------------eal~~GvP~i~~P~~----~DQ---~~nA~~v~~~~G~G~~ 392 (454)
|.-+-.||+. -++..++|+++.|-. .+. ..|...+.+. |+-+.
T Consensus 79 IaPaTantlAKiA~GiaDnllt~~~la~~~pvvlaPamn~~m~~~p~~~~Nl~~L~~~-G~~iv 141 (181)
T 1g63_A 79 VLPASANTINKIANGICDNLLTTVCLTGYQKLFIFPNMNIRMWGNPFLQKNIDLLKNN-DVKVY 141 (181)
T ss_dssp EEEECHHHHHHHHTTCCCSHHHHHHHHTGGGEEEEECCCHHHHTCHHHHHHHHHHHTT-TCEEC
T ss_pred EecCCHHHHHHHHccccCcHHHHHHHHcCCCEEEEeCCChhhcCCHHHHHHHHHHHHC-CCEEE
Confidence 8888877653 347789999999932 222 4577777776 76443
No 174
>1xmp_A PURE, phosphoribosylaminoimidazole carboxylase; purine biosynthesis, spine, lyase; 1.80A {Bacillus anthracis} SCOP: c.23.8.1
Probab=22.48 E-value=3.2e+02 Score=22.27 Aligned_cols=142 Identities=13% Similarity=0.192 Sum_probs=74.6
Q ss_pred CcEEEEeeCCCCCCCHHHHHHHHHHHHhcCCCEEEEEcCCcccccchhhhhhhCCCceEeeccChHhhhcccCcceEEec
Q 012893 272 ASVIYISFGSMITPPRAEVIALAEALEAIGFPFLWSFRGNAEEQLPKGFLERTKSYGKVVPWAPQLKILEHSSVCVFVTH 351 (454)
Q Consensus 272 ~~~v~vs~Gs~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~~~~~~nv~v~~~vp~~~ll~~~~~~~~I~H 351 (454)
+|.|-|-.||.. +....++....++..|..+=+.+-+-. ..|+.+.+... + .....++++|.=
T Consensus 11 ~~~V~IimGS~S--D~~v~~~a~~~L~~~Gi~~dv~V~SaH--R~p~~l~~~~~----------~---a~~~g~~ViIa~ 73 (170)
T 1xmp_A 11 KSLVGVIMGSTS--DWETMKYACDILDELNIPYEKKVVSAH--RTPDYMFEYAE----------T---ARERGLKVIIAG 73 (170)
T ss_dssp CCSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCTT--TSHHHHHHHHH----------H---TTTTTCCEEEEE
T ss_pred CCcEEEEECcHH--HHHHHHHHHHHHHHcCCCEEEEEEecc--CCHHHHHHHHH----------H---HHhCCCcEEEEE
Confidence 356777788776 677888899999998887655544422 23433322110 0 000112355554
Q ss_pred CC-ch---hHHHHHHcCCCeeccccccc--hhHHHH-HHHH--hhceeec-CcCC---CCCHHHHHHHHHHHhcCchHHH
Q 012893 352 CG-WN---STIEGITGGVPMVCRPVFAD--QALNQR-IIET--AWGIGVG-VXGE---KFTKDETVNALKQVLSSEEGKR 418 (454)
Q Consensus 352 gG-~g---sv~eal~~GvP~i~~P~~~D--Q~~nA~-~v~~--~~G~G~~-~~~~---~~~~~~l~~av~~vl~~~~~~~ 418 (454)
+| .+ ++..+ ..-.|+|.+|.... ....+- -+.+ . |+.+. +..+ ..++..++..|.. +.|+ .
T Consensus 74 AG~aa~LpgvvA~-~t~~PVIgVP~~~~~l~G~daLlSivqmP~-GvpVatV~I~~a~~~nAallAaqIla-~~d~---~ 147 (170)
T 1xmp_A 74 AGGAAHLPGMVAA-KTNLPVIGVPVQSKALNGLDSLLSIVQMPG-GVPVATVAIGKAGSTNAGLLAAQILG-SFHD---D 147 (170)
T ss_dssp EESSCCHHHHHHT-TCCSCEEEEEECCTTTTTHHHHHHHHCCCT-TCCCEECCSSHHHHHHHHHHHHHHHH-TTCH---H
T ss_pred CCchhhhHHHHHh-ccCCCEEEeeCCCCCCCcHHHHHHHhcCCC-CCeeEEEecCCcchHHHHHHHHHHHc-cCCH---H
Confidence 44 22 33333 34688898887542 111111 1222 2 33321 1221 2344555544443 3455 8
Q ss_pred HHHHHHHHHHHHHHHHhh
Q 012893 419 MRENVGALKKLAFKAVES 436 (454)
Q Consensus 419 ~~~~a~~l~~~~~~~~~~ 436 (454)
++++.+++++++++....
T Consensus 148 l~~kl~~~r~~~~~~v~~ 165 (170)
T 1xmp_A 148 IHDALELRREAIEKDVRE 165 (170)
T ss_dssp HHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHh
Confidence 888888888888876543
No 175
>3rfo_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta structure, cytosol; HET: PGE; 2.40A {Bacillus anthracis}
Probab=22.30 E-value=84 Score=28.72 Aligned_cols=36 Identities=17% Similarity=0.063 Sum_probs=27.2
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHhhhcCCCcEEEEEEeCCC
Q 012893 8 TQRRHVAVLAFPFGTHAAPLLDLVRRLSEAALEEEVTFSFFSTAQ 52 (454)
Q Consensus 8 ~~~~~il~~~~~~~GH~~p~l~la~~L~~~~~G~~h~V~~~~~~~ 52 (454)
.+||||+|+-.+.++ +...++| .+.| |+|..+.+..
T Consensus 2 ~~mmrIvf~Gtp~fa-----~~~L~~L--~~~~--~~v~~Vvt~p 37 (317)
T 3rfo_A 2 NAMIKVVFMGTPDFS-----VPVLRRL--IEDG--YDVIGVVTQP 37 (317)
T ss_dssp CTTSEEEEECCSTTH-----HHHHHHH--HHTT--CEEEEEECCC
T ss_pred CCceEEEEEeCCHHH-----HHHHHHH--HHCC--CcEEEEEeCC
Confidence 468999999888654 3445778 7789 9998777643
No 176
>2zki_A 199AA long hypothetical Trp repressor binding protein; alpha/beta structure, transcription; 2.90A {Sulfolobus tokodaii}
Probab=22.23 E-value=64 Score=26.71 Aligned_cols=38 Identities=8% Similarity=0.030 Sum_probs=27.2
Q ss_pred CCcEEEEEcCCCccCHHHHHH-HHHHHhhhcCCCcEEEEEEeCC
Q 012893 9 QRRHVAVLAFPFGTHAAPLLD-LVRRLSEAALEEEVTFSFFSTA 51 (454)
Q Consensus 9 ~~~~il~~~~~~~GH~~p~l~-la~~L~~~~~G~~h~V~~~~~~ 51 (454)
+||||+++-+. .|+..-+.. +++.| .+.| ++|.++--.
T Consensus 3 ~mmkilii~~S-~g~T~~la~~i~~~l--~~~g--~~v~~~~l~ 41 (199)
T 2zki_A 3 CKPNILVLFYG-YGSIVELAKEIGKGA--EEAG--AEVKIRRVR 41 (199)
T ss_dssp CCCEEEEEECC-SSHHHHHHHHHHHHH--HHHS--CEEEEEECC
T ss_pred CCcEEEEEEeC-ccHHHHHHHHHHHHH--HhCC--CEEEEEehh
Confidence 45789888777 888776664 45666 6679 888877553
No 177
>3bfj_A 1,3-propanediol oxidoreductase; opportunistic pathogens, decamer, structural genomics,struct proteomics in europe, spine; 2.70A {Klebsiella pneumoniae}
Probab=22.16 E-value=59 Score=30.60 Aligned_cols=12 Identities=25% Similarity=0.099 Sum_probs=9.9
Q ss_pred cCCCeecccccc
Q 012893 363 GGVPMVCRPVFA 374 (454)
Q Consensus 363 ~GvP~i~~P~~~ 374 (454)
-|+|+|.+|...
T Consensus 133 ~~~p~i~IPTT~ 144 (387)
T 3bfj_A 133 PLPPIVAVNTTA 144 (387)
T ss_dssp CCCCEEEEECST
T ss_pred CCCCEEEEeCCC
Confidence 389999999853
No 178
>3o1l_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.20A {Pseudomonas syringae PV}
Probab=22.12 E-value=4.3e+02 Score=23.71 Aligned_cols=107 Identities=14% Similarity=0.209 Sum_probs=56.6
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHhhhcCCCcEEEEEEeCCC--cCccccccccccCCCCeeEEeCCCCCCCCCCCC
Q 012893 8 TQRRHVAVLAFPFGTHAAPLLDLVRRLSEAALEEEVTFSFFSTAQ--SNGSLFMEKDELRDCKIVPYNVESGLPEGFRFT 85 (454)
Q Consensus 8 ~~~~~il~~~~~~~GH~~p~l~la~~L~~~~~G~~h~V~~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 85 (454)
.+++||+++.++. || -+.+|..+....+-+ .+|..+.+.. ..+..++. |++++.+|... .
T Consensus 103 ~~~~ri~vl~Sg~-g~--nl~~ll~~~~~g~l~--~~I~~Visn~~~~~~~A~~~-------gIp~~~~~~~~--~---- 164 (302)
T 3o1l_A 103 AQKKRVVLMASRE-SH--CLADLLHRWHSDELD--CDIACVISNHQDLRSMVEWH-------DIPYYHVPVDP--K---- 164 (302)
T ss_dssp TSCCEEEEEECSC-CH--HHHHHHHHHHTTCSC--SEEEEEEESSSTTHHHHHTT-------TCCEEECCCCS--S----
T ss_pred CCCcEEEEEEeCC-ch--hHHHHHHHHHCCCCC--cEEEEEEECcHHHHHHHHHc-------CCCEEEcCCCc--C----
Confidence 4578998888876 44 345555555112224 5777666532 22333334 88888876211 0
Q ss_pred CCCcchHHHHHHhchHHHHHHHHHHHHhcCCCccEEEEcCch-hhHHHHHHHcCCCeEEEeCc
Q 012893 86 GNPREPVEHFLKATPGNFVRALEKAVAKTGLEISCLITDAFL-WFAAEMAEEMRVPWIAYWTA 147 (454)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pD~vi~d~~~-~~~~~~A~~lgiP~v~~~~~ 147 (454)
......+.+.+++++. +||+||.-.++ .....+-+.+.-.++-++++
T Consensus 165 -------------~r~~~~~~~~~~l~~~--~~DliVlagym~IL~~~~l~~~~~~~INiHpS 212 (302)
T 3o1l_A 165 -------------DKEPAFAEVSRLVGHH--QADVVVLARYMQILPPQLCREYAHQVINIHHS 212 (302)
T ss_dssp -------------CCHHHHHHHHHHHHHT--TCSEEEESSCCSCCCTTHHHHTTTCEEEEESS
T ss_pred -------------CHHHHHHHHHHHHHHh--CCCEEEHhHhhhhcCHHHHhhhhCCeEEeCcc
Confidence 0011122233444555 99998876443 33334445555567776654
No 179
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=22.02 E-value=2.2e+02 Score=26.53 Aligned_cols=89 Identities=8% Similarity=-0.038 Sum_probs=53.6
Q ss_pred EEEEEcCCCcc-CHHHHHHHHHHHhhhcCCCcEEEEEEeCCCcCccccccccccCCCCeeEEeCCCCCCCCCCCCCCCcc
Q 012893 12 HVAVLAFPFGT-HAAPLLDLVRRLSEAALEEEVTFSFFSTAQSNGSLFMEKDELRDCKIVPYNVESGLPEGFRFTGNPRE 90 (454)
Q Consensus 12 ~il~~~~~~~G-H~~p~l~la~~L~~~~~G~~h~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 90 (454)
+++++++++.+ .-.-+..+.++| .+.| .+|.+.++....+..... .++.+...-
T Consensus 222 ~~Vlv~~Gs~~~~~~~~~~~~~al--~~~~--~~vv~~~g~~~~~~~~~~------~~v~~~~~~--------------- 276 (404)
T 3h4t_A 222 PPVYVGFGSGPAPAEAARVAIEAV--RAQG--RRVVLSSGWAGLGRIDEG------DDCLVVGEV--------------- 276 (404)
T ss_dssp CCEEECCTTSCCCTTHHHHHHHHH--HHTT--CCEEEECTTTTCCCSSCC------TTEEEESSC---------------
T ss_pred CeEEEECCCCCCcHHHHHHHHHHH--HhCC--CEEEEEeCCcccccccCC------CCEEEecCC---------------
Confidence 56788888877 444566778888 7788 899888775432221111 123332110
Q ss_pred hHHHHHHhchHHHHHHHHHHHHhcCCCccEEEEcCchhhHHHHHHHcCCCeEEEe
Q 012893 91 PVEHFLKATPGNFVRALEKAVAKTGLEISCLITDAFLWFAAEMAEEMRVPWIAYW 145 (454)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~pD~vi~d~~~~~~~~~A~~lgiP~v~~~ 145 (454)
.. ..++. ..|++|+..- ..+..-|-.+|+|.+.+.
T Consensus 277 ----------~~-----~~ll~----~~d~~v~~gG-~~t~~Eal~~GvP~v~~p 311 (404)
T 3h4t_A 277 ----------NH-----QVLFG----RVAAVVHHGG-AGTTTAVTRAGAPQVVVP 311 (404)
T ss_dssp ----------CH-----HHHGG----GSSEEEECCC-HHHHHHHHHHTCCEEECC
T ss_pred ----------CH-----HHHHh----hCcEEEECCc-HHHHHHHHHcCCCEEEcC
Confidence 00 11221 5699999843 345567788999999973
No 180
>2q28_A Oxalyl-COA decarboxylase; lyase, oxalate degradation, thiami diphosphate, lyase; HET: TPP ADP MES; 1.74A {Escherichia coli} PDB: 2q27_A* 2q29_A*
Probab=21.93 E-value=1.3e+02 Score=29.72 Aligned_cols=76 Identities=12% Similarity=0.129 Sum_probs=42.9
Q ss_pred HHHHHHHHhcCCCEEEEEcCCcccccchhhhhhhCCCceEeeccC-h---------HhhhcccCcceEEecCCch-----
Q 012893 291 IALAEALEAIGFPFLWSFRGNAEEQLPKGFLERTKSYGKVVPWAP-Q---------LKILEHSSVCVFVTHCGWN----- 355 (454)
Q Consensus 291 ~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~~~~~~nv~v~~~vp-~---------~~ll~~~~~~~~I~HgG~g----- 355 (454)
+.+++.|.+.|.+.|+...+.....+-+.+.+ ..+..+.-.. + ...-.++ +++++|.|-|
T Consensus 12 ~~l~~~L~~~GV~~vfg~PG~~~~~l~~al~~---~~i~~i~~~hE~~Aa~~A~Gyar~tg~p--gv~~~TsGpG~~N~~ 86 (564)
T 2q28_A 12 HIIVEALKQNNIDTIYGVVGIPVTDMARHAQA---EGIRYIGFRHEQSAGYAAAASGFLTQKP--GICLTVSAPGFLNGL 86 (564)
T ss_dssp HHHHHHHHHTTCCEEEECCCTTTHHHHHHHHH---TTCEEEECSSHHHHHHHHHHHHHHHSSC--EEEEECSHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEECCCcchHHHHHHHHh---CCCcEEeeCCHHHHHHHHHHHHHHhCCC--EEEEEccCchHHHHH
Confidence 45666666667766666665433222222211 1233322211 1 1111233 4899999964
Q ss_pred -hHHHHHHcCCCeeccc
Q 012893 356 -STIEGITGGVPMVCRP 371 (454)
Q Consensus 356 -sv~eal~~GvP~i~~P 371 (454)
.+.||-+.++|+|++-
T Consensus 87 ~gi~~A~~~~vPll~it 103 (564)
T 2q28_A 87 TALANATVNGFPMIMIS 103 (564)
T ss_dssp HHHHHHHHHTCCEEEEE
T ss_pred HHHHHHHhcCCCEEEEe
Confidence 6789999999999884
No 181
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=21.89 E-value=91 Score=28.97 Aligned_cols=36 Identities=25% Similarity=0.155 Sum_probs=24.7
Q ss_pred EEEEeeCCCCCCCHHHHHHHHHHHHhcCCCEEEEEcCC
Q 012893 274 VIYISFGSMITPPRAEVIALAEALEAIGFPFLWSFRGN 311 (454)
Q Consensus 274 ~v~vs~Gs~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 311 (454)
+++++.|+.+. ...+..++.++.+.|+.+.+.+++.
T Consensus 18 Il~~~~~~~gh--~~~~~~La~~L~~~GheV~v~~~~~ 53 (398)
T 4fzr_A 18 ILVIAGCSEGF--VMPLVPLSWALRAAGHEVLVAASEN 53 (398)
T ss_dssp EEEECCSSHHH--HGGGHHHHHHHHHTTCEEEEEEEGG
T ss_pred EEEEcCCCcch--HHHHHHHHHHHHHCCCEEEEEcCHH
Confidence 66777664331 1224578899999999998888754
No 182
>1qgu_B Protein (nitrogenase molybdenum iron protein); biological nitrogen fixation, nitrogen metabolism, molybdoenzymes, electron transfer; HET: HCA CFM CLF; 1.60A {Klebsiella pneumoniae} SCOP: c.92.2.3 PDB: 1h1l_B* 1qh1_B* 1qh8_B*
Probab=21.85 E-value=1.6e+02 Score=28.91 Aligned_cols=25 Identities=16% Similarity=0.375 Sum_probs=20.5
Q ss_pred CccEEEEcCchhhHHHHHHHc-------CCCeEEE
Q 012893 117 EISCLITDAFLWFAAEMAEEM-------RVPWIAY 144 (454)
Q Consensus 117 ~pD~vi~d~~~~~~~~~A~~l-------giP~v~~ 144 (454)
+||++|.+.. ...+|+++ |||++.+
T Consensus 434 ~pDLiig~~~---~~~~a~~~~~~g~~~gip~v~i 465 (519)
T 1qgu_B 434 QPDFMIGNSY---GKFIQRDTLAKGKAFEVPLIRL 465 (519)
T ss_dssp CCSEEEECGG---GHHHHHHHHHHCGGGCCCEEEC
T ss_pred CCCEEEECcc---hHHHHHHhhcccccCCCCeEEe
Confidence 8999999964 35678888 9999876
No 183
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=21.76 E-value=57 Score=29.68 Aligned_cols=46 Identities=13% Similarity=-0.079 Sum_probs=34.7
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHhhhcCCCcEEEEEEeCCCcCccccccccccCCCCeeEEe
Q 012893 11 RHVAVLAFPFGTHAAPLLDLVRRLSEAALEEEVTFSFFSTAQSNGSLFMEKDELRDCKIVPYN 73 (454)
Q Consensus 11 ~~il~~~~~~~GH~~p~l~la~~L~~~~~G~~h~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (454)
|||.++-.|+.|- .+|..| .+.| |+|+++.... .+.+.+. |+....
T Consensus 3 mkI~IiGaGaiG~-----~~a~~L--~~~g--~~V~~~~r~~-~~~i~~~-------Gl~~~~ 48 (320)
T 3i83_A 3 LNILVIGTGAIGS-----FYGALL--AKTG--HCVSVVSRSD-YETVKAK-------GIRIRS 48 (320)
T ss_dssp CEEEEESCCHHHH-----HHHHHH--HHTT--CEEEEECSTT-HHHHHHH-------CEEEEE
T ss_pred CEEEEECcCHHHH-----HHHHHH--HhCC--CeEEEEeCCh-HHHHHhC-------CcEEee
Confidence 6999998888874 578899 8899 9999998765 3455545 666554
No 184
>1ybh_A Acetolactate synthase, chloroplast; acetohydroxyacid synthase, herbicide, sulfonylurea, thiamin diphosphate, FAD, inhibitor; HET: CIE NHE FAD P22; 2.50A {Arabidopsis thaliana} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1yhy_A* 1yhz_A* 1yi0_A* 1yi1_A* 1z8n_A* 3ea4_A* 3e9y_A*
Probab=21.69 E-value=1.4e+02 Score=29.93 Aligned_cols=79 Identities=18% Similarity=0.204 Sum_probs=48.5
Q ss_pred HHHHHHHHHHhcCCCEEEEEcCCcccccchhhhhhhCCCceEeeccC----------hHhhhcccCcceEEecCCch---
Q 012893 289 EVIALAEALEAIGFPFLWSFRGNAEEQLPKGFLERTKSYGKVVPWAP----------QLKILEHSSVCVFVTHCGWN--- 355 (454)
Q Consensus 289 ~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~~~~~~nv~v~~~vp----------~~~ll~~~~~~~~I~HgG~g--- 355 (454)
..+.+++.|++.|.+.++...+.....+-+.+.+. +.+..+.-.. +...-.+ ..++++|.|-|
T Consensus 14 ~a~~l~~~L~~~GV~~vfg~PG~~~~~l~~al~~~--~~i~~i~~~~E~~Aa~~A~Gyar~tg~--p~v~~~TsGpG~~N 89 (590)
T 1ybh_A 14 GADILVEALERQGVETVFAYPGGASMEIHQALTRS--SSIRNVLPRHEQGGVFAAEGYARSSGK--PGICIATSGPGATN 89 (590)
T ss_dssp HHHHHHHHHHTTTCCEEEECCCGGGHHHHHHHHHC--SSCEECCCSSHHHHHHHHHHHHHHHSS--CEEEEECTTHHHHT
T ss_pred HHHHHHHHHHHcCCCEEEEcCCCchHHHHHHHhcc--CCccEEeeCCHHHHHHHHHHHHHHHCC--CEEEEeccCchHHH
Confidence 44677888888888888887776543333333221 2233322111 1111122 34899999965
Q ss_pred ---hHHHHHHcCCCeeccc
Q 012893 356 ---STIEGITGGVPMVCRP 371 (454)
Q Consensus 356 ---sv~eal~~GvP~i~~P 371 (454)
.+.||-+.++|+|++-
T Consensus 90 ~~~gv~~A~~~~vPll~it 108 (590)
T 1ybh_A 90 LVSGLADALLDSVPLVAIT 108 (590)
T ss_dssp THHHHHHHHHHTCCEEEEE
T ss_pred HHHHHHHHHhhCCCEEEEe
Confidence 7889999999999874
No 185
>1q1v_A DEK protein; winged-helix motif, DNA binding protein; NMR {Homo sapiens} SCOP: a.159.4.1
Probab=21.42 E-value=1.6e+02 Score=20.01 Aligned_cols=36 Identities=17% Similarity=0.208 Sum_probs=23.1
Q ss_pred CCCHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHH
Q 012893 397 KFTKDETVNALKQVLSSEEGKRMRENVGALKKLAFKAV 434 (454)
Q Consensus 397 ~~~~~~l~~av~~vl~~~~~~~~~~~a~~l~~~~~~~~ 434 (454)
..+.++|.++|+++|.+.+...... +.+++.+.+..
T Consensus 11 ~Psd~ei~~~I~~IL~~aDL~tvT~--K~VR~~Le~~~ 46 (70)
T 1q1v_A 11 PPTDEELKETIKKLLASANLEEVTM--KQICKKVYENY 46 (70)
T ss_dssp CCCHHHHHHHHHHHHTTSCGGGCCH--HHHHHHHHHHC
T ss_pred CcCHHHHHHHHHHHHHhCCHHHHhH--HHHHHHHHHHc
Confidence 4689999999999998754333222 33445554433
No 186
>2vbi_A Pyruvate decarboxylase; thiamine pyrophosphate, lyase, pyruv flavoprotein, THDP-dependent enzyme; HET: TPP; 2.75A {Acetobacter pasteurianus}
Probab=21.32 E-value=94 Score=30.89 Aligned_cols=77 Identities=17% Similarity=0.127 Sum_probs=44.1
Q ss_pred HHHHHHHHhcCCCEEEEEcCCcccccchhhhhhhCCCceEeeccC---------hHhhhcccCcceEEecCCc------h
Q 012893 291 IALAEALEAIGFPFLWSFRGNAEEQLPKGFLERTKSYGKVVPWAP---------QLKILEHSSVCVFVTHCGW------N 355 (454)
Q Consensus 291 ~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~~~~~~nv~v~~~vp---------~~~ll~~~~~~~~I~HgG~------g 355 (454)
+.+++.|.+.|.+.++...+.....+-+.+.+. +.+..+.-.. -.+-... ..++++|.|- +
T Consensus 7 ~~l~~~L~~~GV~~vfg~PG~~~~~l~~al~~~--~~i~~v~~~~E~~Aa~~A~Gyar~tg--~~v~~~TsGpG~~N~~~ 82 (566)
T 2vbi_A 7 MYLAERLVQIGLKHHFAVAGDYNLVLLDQLLLN--KDMKQIYCCNELNCGFSAEGYARSNG--AAAAVVTFSVGAISAMN 82 (566)
T ss_dssp HHHHHHHHHHTCSEEEECCCTTTHHHHHHHHTC--TTSEEEECSSHHHHHHHHHHHHHHHS--CEEEEECTTTTHHHHHH
T ss_pred HHHHHHHHHcCCCEEEeCCCCccHHHHHHHhcC--CCCeEEeeCcHHHHHHHHHHHHhhcC--CeEEEEeCCCCHHHHHH
Confidence 456667777777777766665433333333211 1233322111 1111222 4588899886 5
Q ss_pred hHHHHHHcCCCeeccc
Q 012893 356 STIEGITGGVPMVCRP 371 (454)
Q Consensus 356 sv~eal~~GvP~i~~P 371 (454)
.+.||.+.++|+|++-
T Consensus 83 gia~A~~~~vPll~it 98 (566)
T 2vbi_A 83 ALGGAYAENLPVILIS 98 (566)
T ss_dssp HHHHHHHTTCCEEEEE
T ss_pred HHHHHHhhCCCEEEEE
Confidence 7889999999999774
No 187
>4feg_A Pyruvate oxidase; carbanion, structure activity relationship, oxidation-reduct umpolung, thiamine diphosphate, reaction intermediate; HET: TDM FAD GOL; 1.09A {Lactobacillus plantarum} PDB: 4fee_A* 1y9d_A* 2ez9_A* 2ez4_A* 2ez8_A* 2ezt_A* 2ezu_A* 1pow_A* 1pox_A*
Probab=21.24 E-value=1.9e+02 Score=29.03 Aligned_cols=80 Identities=15% Similarity=0.184 Sum_probs=48.6
Q ss_pred HHHHHHHHHHhcCCCEEEEEcCCcccccchhhhhhhCCCceEeeccC----------hHhhhcccCcceEEecCCch---
Q 012893 289 EVIALAEALEAIGFPFLWSFRGNAEEQLPKGFLERTKSYGKVVPWAP----------QLKILEHSSVCVFVTHCGWN--- 355 (454)
Q Consensus 289 ~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~~~~~~nv~v~~~vp----------~~~ll~~~~~~~~I~HgG~g--- 355 (454)
.-+.+++.|.+.|.+.|+...+.....+-+.+.+. ++++..+.-.. +..+-.+ .+++++|.|-|
T Consensus 13 ~a~~l~~~L~~~GV~~vfg~PG~~~~~l~dal~~~-~~~i~~i~~~hE~~Aa~aA~GyAr~tg~--~gv~~~TsGpG~~N 89 (603)
T 4feg_A 13 AGAAVIKVLEAWGVDHLYGIPGGSINSIMDALSAE-RDRIHYIQVRHEEVGAMAAAADAKLTGK--IGVCFGSAGPGGTH 89 (603)
T ss_dssp HHHHHHHHHHHTTCCEEEECCCGGGHHHHHHHHHT-TTTSEEEECSSHHHHHHHHHHHHHHHSS--CEEEEECTTHHHHT
T ss_pred HHHHHHHHHHHCCCCEEEEeCCCchHHHHHHHHhc-cCCCeEEEecChHHHHHHHHHHHHHhCC--ceEEEecCCchHHH
Confidence 34567778888888888777776543333333321 12344332221 1111222 34899999966
Q ss_pred ---hHHHHHHcCCCeeccc
Q 012893 356 ---STIEGITGGVPMVCRP 371 (454)
Q Consensus 356 ---sv~eal~~GvP~i~~P 371 (454)
.+.+|-+.++|+|++-
T Consensus 90 ~~~gia~A~~~~vPvl~it 108 (603)
T 4feg_A 90 LMNGLYDAREDHVPVLALI 108 (603)
T ss_dssp THHHHHHHHHTTCCEEEEE
T ss_pred HHHHHHHHHHcCCCEEEEe
Confidence 6899999999999774
No 188
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=21.11 E-value=93 Score=29.05 Aligned_cols=37 Identities=11% Similarity=0.133 Sum_probs=26.2
Q ss_pred cEEEEeeCCCCCCCHHHHHHHHHHHHhcCCCEEEEEcCC
Q 012893 273 SVIYISFGSMITPPRAEVIALAEALEAIGFPFLWSFRGN 311 (454)
Q Consensus 273 ~~v~vs~Gs~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 311 (454)
.+++++.|+.+. ..-+..+++++.+.|+.+.+.+++.
T Consensus 22 rIl~~~~~~~GH--v~p~l~La~~L~~~Gh~V~v~~~~~ 58 (415)
T 3rsc_A 22 HLLIVNVASHGL--ILPTLTVVTELVRRGHRVSYVTAGG 58 (415)
T ss_dssp EEEEECCSCHHH--HGGGHHHHHHHHHTTCEEEEEECGG
T ss_pred EEEEEeCCCccc--cccHHHHHHHHHHCCCEEEEEeCHH
Confidence 377777775542 2234568889999999999988654
No 189
>3kjh_A CO dehydrogenase/acetyl-COA synthase complex, accessory protein COOC; Zn-bound dimer, nickel binding protein, ATPase; 1.90A {Carboxydothermus hydrogenoformans} PDB: 3kjg_A* 3kje_A 3kji_A*
Probab=20.92 E-value=62 Score=27.72 Aligned_cols=38 Identities=11% Similarity=-0.094 Sum_probs=32.7
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHhhhcCCCcEEEEEEeCCC
Q 012893 11 RHVAVLAFPFGTHAAPLLDLVRRLSEAALEEEVTFSFFSTAQ 52 (454)
Q Consensus 11 ~~il~~~~~~~GH~~p~l~la~~L~~~~~G~~h~V~~~~~~~ 52 (454)
|||.|..-|+-|=..=.+.||..| .++| ++|.++=...
T Consensus 1 mkI~vs~kGGvGKTt~a~~LA~~l--a~~g--~~VlliD~D~ 38 (254)
T 3kjh_A 1 MKLAVAGKGGVGKTTVAAGLIKIM--ASDY--DKIYAVDGDP 38 (254)
T ss_dssp CEEEEECSSSHHHHHHHHHHHHHH--TTTC--SCEEEEEECT
T ss_pred CEEEEecCCCCCHHHHHHHHHHHH--HHCC--CeEEEEeCCC
Confidence 578887778999999999999999 8899 9998887644
No 190
>2kw0_A CCMH protein; oxidoreductase, cytochrome C maturation; NMR {Escherichia coli}
Probab=20.72 E-value=1.4e+02 Score=21.56 Aligned_cols=30 Identities=10% Similarity=0.126 Sum_probs=21.6
Q ss_pred HHHHHHHHHHHHHHhhCCChHHHHHHHHHH
Q 012893 421 ENVGALKKLAFKAVESDGSSTKNFKALVEV 450 (454)
Q Consensus 421 ~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~ 450 (454)
.-|+.|+.++++-+..|.|....++.|++.
T Consensus 40 ~iA~dlR~~Vre~l~~G~Sd~eI~~~mv~R 69 (90)
T 2kw0_A 40 MIATDLRQKVYELMQEGKSKKEIVDYMVAR 69 (90)
T ss_dssp HHHHHHHHHHHHHHHHTCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCHHHHHHHHHHh
Confidence 556677777777777777777777777764
No 191
>1ydg_A Trp repressor binding protein WRBA; tetramer, structural genomics, PSI, protein structure initiative; 2.00A {Deinococcus radiodurans} SCOP: c.23.5.8 PDB: 1yrh_A*
Probab=20.42 E-value=97 Score=25.88 Aligned_cols=40 Identities=8% Similarity=0.037 Sum_probs=27.6
Q ss_pred CCCCcEEEEEcCCCccCHHHHHH-HHHHHhhhcCCCcEEEEEEeC
Q 012893 7 STQRRHVAVLAFPFGTHAAPLLD-LVRRLSEAALEEEVTFSFFST 50 (454)
Q Consensus 7 ~~~~~~il~~~~~~~GH~~p~l~-la~~L~~~~~G~~h~V~~~~~ 50 (454)
.+.++||+++-+-..|+..-+.. +++.| .+.| ++|.++--
T Consensus 3 ~~~mmkilii~~S~~g~T~~la~~i~~~l--~~~g--~~v~~~~l 43 (211)
T 1ydg_A 3 LTAPVKLAIVFYSSTGTGYAMAQEAAEAG--RAAG--AEVRLLKV 43 (211)
T ss_dssp --CCCEEEEEECCSSSHHHHHHHHHHHHH--HHTT--CEEEEEEC
T ss_pred cCCCCeEEEEEECCCChHHHHHHHHHHHH--hcCC--CEEEEEec
Confidence 34567998887766888776664 46667 6689 88887654
No 192
>2x7j_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene -1-carboxylate synthase; transferase, metal-binding; HET: TPP; 2.35A {Bacillus subtilis}
Probab=20.39 E-value=87 Score=31.49 Aligned_cols=80 Identities=11% Similarity=0.054 Sum_probs=52.3
Q ss_pred HHHHHHHHHHHhcCCCEEEEEcCCcccccchhhhhhhCCCceEeeccC----------hHhhhcccCcceEEecCCc---
Q 012893 288 AEVIALAEALEAIGFPFLWSFRGNAEEQLPKGFLERTKSYGKVVPWAP----------QLKILEHSSVCVFVTHCGW--- 354 (454)
Q Consensus 288 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~~~~~~nv~v~~~vp----------~~~ll~~~~~~~~I~HgG~--- 354 (454)
...+.+++.|++.|.+.|+...+.....+-+.+.+. +.+..+.-.. +..+-.+ .+++++|.|-
T Consensus 32 ~~a~~lv~~L~~~GV~~vFg~PG~~~~~l~dal~~~--~~i~~i~~~hE~~Aa~aA~GyAr~tgk--pgv~~~TsGpG~~ 107 (604)
T 2x7j_A 32 HYIGSFIDEFALSGITDAVVCPGSRSTPLAVLCAAH--PDISVHVQIDERSAGFFALGLAKAKQR--PVLLICTSGTAAA 107 (604)
T ss_dssp HHHHHHHHHHHHHTCCEEEECCCSTTHHHHHHHHHC--TTCEEEECSSHHHHHHHHHHHHHHHTS--CEEEEECSSHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEECcCcccHHHHHHHHhC--CCceEEEecChHHHHHHHHHHHHhhCC--CEEEEECChhHHH
Confidence 344678999999999999988887644444444321 2344432221 1112222 3599999996
Q ss_pred ---hhHHHHHHcCCCeeccc
Q 012893 355 ---NSTIEGITGGVPMVCRP 371 (454)
Q Consensus 355 ---gsv~eal~~GvP~i~~P 371 (454)
+.+.||.+.++|+|++-
T Consensus 108 N~~~gia~A~~~~vPlv~It 127 (604)
T 2x7j_A 108 NFYPAVVEAHYSRVPIIVLT 127 (604)
T ss_dssp TTHHHHHHHHHHTCCEEEEE
T ss_pred HHHHHHHHHhhcCCCEEEEe
Confidence 57889999999999874
No 193
>2b8t_A Thymidine kinase; deoxyribonucleoside kinase, zinc-binding domain, TK1, UU-TK, transferase; HET: THM; 2.00A {Ureaplasma parvum} SCOP: c.37.1.24 g.39.1.14 PDB: 2uz3_A*
Probab=20.34 E-value=2.7e+02 Score=23.74 Aligned_cols=38 Identities=21% Similarity=0.378 Sum_probs=31.9
Q ss_pred cEEEEEcCC-CccCHHHHHHHHHHHhhhcCCCcEEEEEEeCCC
Q 012893 11 RHVAVLAFP-FGTHAAPLLDLVRRLSEAALEEEVTFSFFSTAQ 52 (454)
Q Consensus 11 ~~il~~~~~-~~GH~~p~l~la~~L~~~~~G~~h~V~~~~~~~ 52 (454)
-.+.+++.+ +.|=..-++.++.++ ..+| .+|.++.+..
T Consensus 12 G~i~litG~mGsGKTT~ll~~~~r~--~~~g--~kVli~~~~~ 50 (223)
T 2b8t_A 12 GWIEFITGPMFAGKTAELIRRLHRL--EYAD--VKYLVFKPKI 50 (223)
T ss_dssp CEEEEEECSTTSCHHHHHHHHHHHH--HHTT--CCEEEEEECC
T ss_pred cEEEEEECCCCCcHHHHHHHHHHHH--HhcC--CEEEEEEecc
Confidence 467677666 999999999999999 8899 9999987654
No 194
>1xrs_B D-lysine 5,6-aminomutase beta subunit; TIM barrel, rossmann domain, PLP, cobalamin, 5'-deoxyad radical, adenosylcobalamin; HET: B12 PLP 5AD; 2.80A {Clostridium sticklandii} SCOP: c.23.6.1 d.230.4.1
Probab=20.28 E-value=49 Score=29.35 Aligned_cols=44 Identities=9% Similarity=0.042 Sum_probs=37.5
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHH--------HhhhcC-CCcEEEEEEeCCCcCcc
Q 012893 9 QRRHVAVLAFPFGTHAAPLLDLVRR--------LSEAAL-EEEVTFSFFSTAQSNGS 56 (454)
Q Consensus 9 ~~~~il~~~~~~~GH~~p~l~la~~--------L~~~~~-G~~h~V~~~~~~~~~~~ 56 (454)
++.+||+.+.++-.|-....-++.. | .+. | ++|..++.....+.
T Consensus 119 ~~~~Vvlatv~gD~HdiG~~iv~~~k~~~~~~~L--~~~~G--~eVi~LG~~vp~e~ 171 (262)
T 1xrs_B 119 RKIVVVGASTGTDAHTVGIDAIMNMKGYAGHYGL--ERYEM--IDAYNLGSQVANED 171 (262)
T ss_dssp SCEEEEEEEBTTCCCCHHHHHHHSTTCBTTBCCG--GGCTT--EEEEECCSSBCHHH
T ss_pred CCCEEEEEeCCCCCchHHHHHHhhhhcccchHHH--HhcCC--cEEEECCCCCCHHH
Confidence 4689999999999999999988877 9 889 9 99999888654443
No 195
>2o70_A OHCU decarboxylase; URIC acid, decarboxylation, 5-hydroxyisourate, allantoin, lyase; 1.80A {Danio rerio} SCOP: a.288.1.1 PDB: 2o73_A* 2o74_A*
Probab=20.13 E-value=2.6e+02 Score=22.85 Aligned_cols=55 Identities=18% Similarity=0.211 Sum_probs=40.8
Q ss_pred hhHHHHHHHHhhceeecCcCCCCCHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHH
Q 012893 376 QALNQRIIETAWGIGVGVXGEKFTKDETVNALKQVLSSEEGKRMRENVGALKKLAF 431 (454)
Q Consensus 376 Q~~nA~~v~~~~G~G~~~~~~~~~~~~l~~av~~vl~~~~~~~~~~~a~~l~~~~~ 431 (454)
+..|+.+-++. |.-..+--...+.++|-+.+.+=+.|+...+.+..+.++.+..+
T Consensus 105 ~~lN~~Y~~kF-GfpFvi~v~g~s~~~IL~~l~~Rl~n~~~~E~~~a~~ev~kIa~ 159 (174)
T 2o70_A 105 YRLNSEYKERF-GFPFVICARLNNKADIVRQLSERLKNRRTAELECAIEEVKKICS 159 (174)
T ss_dssp HHHHHHHHHHH-SSCCCCCGGGCCHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHC-CCeEEEeeCCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Confidence 56799999999 87766543346889999999999988755567777776665544
No 196
>3l4e_A Uncharacterized peptidase LMO0363; hypothetical protein LMO0363, csgid, similar to peptidase E, hydrolase, protease, serine protease; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=20.10 E-value=1.7e+02 Score=24.63 Aligned_cols=37 Identities=24% Similarity=0.180 Sum_probs=27.1
Q ss_pred CCcEEEEeeCCCCCCCHHHHHHHHHHHHhcCCCEEEE
Q 012893 271 NASVIYISFGSMITPPRAEVIALAEALEAIGFPFLWS 307 (454)
Q Consensus 271 ~~~~v~vs~Gs~~~~~~~~~~~~~~~~~~~~~~~i~~ 307 (454)
.+.++||..+|........+....+++++.|..+.+.
T Consensus 27 ~~~i~~Ip~As~~~~~~~~~~s~~~a~~~lG~~v~~~ 63 (206)
T 3l4e_A 27 GKTVTFIPTASTVEEVTFYVEAGKKALESLGLLVEEL 63 (206)
T ss_dssp TCEEEEECGGGGGCSCCHHHHHHHHHHHHTTCEEEEC
T ss_pred CCEEEEECCCCCCCCHHHHHHHHHHHHHHcCCeEEEE
Confidence 4568999888764334567788899999999875543
No 197
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=20.10 E-value=60 Score=29.85 Aligned_cols=33 Identities=21% Similarity=0.232 Sum_probs=25.5
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHhhhcCCCcEEEEEEeC
Q 012893 9 QRRHVAVLAFPFGTHAAPLLDLVRRLSEAALEEEVTFSFFST 50 (454)
Q Consensus 9 ~~~~il~~~~~~~GH~~p~l~la~~L~~~~~G~~h~V~~~~~ 50 (454)
++|||.++-.+..|. .+|..| .+.| |+|+++..
T Consensus 3 ~~mki~iiG~G~~G~-----~~a~~L--~~~g--~~V~~~~r 35 (359)
T 1bg6_A 3 ESKTYAVLGLGNGGH-----AFAAYL--ALKG--QSVLAWDI 35 (359)
T ss_dssp -CCEEEEECCSHHHH-----HHHHHH--HHTT--CEEEEECS
T ss_pred CcCeEEEECCCHHHH-----HHHHHH--HhCC--CEEEEEeC
Confidence 457999998776663 468889 7899 99998765
No 198
>3goc_A Endonuclease V; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: YES; 1.60A {Streptomyces avermitilis}
Probab=20.10 E-value=1.5e+02 Score=25.62 Aligned_cols=35 Identities=11% Similarity=0.143 Sum_probs=26.4
Q ss_pred HHhcCCCccEEEEcCc-------hhhHHHHHHHcCCCeEEEe
Q 012893 111 VAKTGLEISCLITDAF-------LWFAAEMAEEMRVPWIAYW 145 (454)
Q Consensus 111 ~~~~~~~pD~vi~d~~-------~~~~~~~A~~lgiP~v~~~ 145 (454)
++.+...||+++.|.. +..|..+--.+|+|+|-+.
T Consensus 101 l~~L~~~PdlllvDG~GiaHPRr~GlAsHlGv~l~~PtIGVA 142 (237)
T 3goc_A 101 LDALPCPPGLIVCDGYGVAHPRRFGLASHLGVLTGLPTIGVA 142 (237)
T ss_dssp HHTSSSCCSEEEEESCSSCSTTSCCHHHHHHHHHCSCEEEEE
T ss_pred HHhcCCCCCEEEEeCceeecCCCcchhheeeeecCCCEEeee
Confidence 3444568999999954 3456678889999999975
No 199
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=20.00 E-value=63 Score=29.24 Aligned_cols=46 Identities=7% Similarity=-0.047 Sum_probs=34.1
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHhhhcCCCcEEEEEEeCCCcCccccccccccCCCCeeEEe
Q 012893 11 RHVAVLAFPFGTHAAPLLDLVRRLSEAALEEEVTFSFFSTAQSNGSLFMEKDELRDCKIVPYN 73 (454)
Q Consensus 11 ~~il~~~~~~~GH~~p~l~la~~L~~~~~G~~h~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (454)
|||.++-.|+.|- .+|..| .+.| |+|+++.... .+.+.+. |+....
T Consensus 3 mkI~IiGaGaiG~-----~~a~~L--~~~g--~~V~~~~r~~-~~~i~~~-------g~~~~~ 48 (312)
T 3hn2_A 3 LRIAIVGAGALGL-----YYGALL--QRSG--EDVHFLLRRD-YEAIAGN-------GLKVFS 48 (312)
T ss_dssp -CEEEECCSTTHH-----HHHHHH--HHTS--CCEEEECSTT-HHHHHHT-------CEEEEE
T ss_pred CEEEEECcCHHHH-----HHHHHH--HHCC--CeEEEEEcCc-HHHHHhC-------CCEEEc
Confidence 6899998888884 468899 8899 9999998765 3445444 666654
Done!