Query 012895
Match_columns 454
No_of_seqs 464 out of 2908
Neff 8.8
Searched_HMMs 46136
Date Fri Mar 29 07:25:56 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012895.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/012895hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02533 probable purple acid 100.0 6.4E-82 1.4E-86 635.7 47.4 406 26-432 14-426 (427)
2 KOG1378 Purple acid phosphatas 100.0 3.5E-77 7.6E-82 580.0 39.5 397 25-427 10-440 (452)
3 cd00839 MPP_PAPs purple acid p 100.0 2.6E-46 5.7E-51 363.7 30.2 275 145-424 2-294 (294)
4 PTZ00422 glideosome-associated 100.0 7.8E-34 1.7E-38 277.2 27.3 257 145-427 24-332 (394)
5 cd07378 MPP_ACP5 Homo sapiens 100.0 3.1E-32 6.7E-37 262.6 23.6 240 148-408 1-274 (277)
6 cd07395 MPP_CSTP1 Homo sapiens 100.0 2.5E-28 5.4E-33 233.4 23.8 227 145-408 2-261 (262)
7 PF09423 PhoD: PhoD-like phosp 100.0 1.1E-27 2.4E-32 246.0 28.3 340 59-406 3-453 (453)
8 COG3540 PhoD Phosphodiesterase 100.0 1.2E-28 2.5E-33 238.7 16.5 277 55-340 39-418 (522)
9 KOG2679 Purple (tartrate-resis 99.9 4.7E-26 1E-30 205.3 19.2 264 138-425 33-330 (336)
10 cd07402 MPP_GpdQ Enterobacter 99.9 1.3E-24 2.9E-29 204.9 19.3 217 149-399 1-238 (240)
11 cd07396 MPP_Nbla03831 Homo sap 99.9 2.4E-24 5.3E-29 206.1 19.0 193 148-364 1-244 (267)
12 PRK11148 cyclic 3',5'-adenosin 99.9 1.8E-23 3.9E-28 201.0 23.2 238 139-412 5-264 (275)
13 cd07401 MPP_TMEM62_N Homo sapi 99.9 6.9E-22 1.5E-26 187.6 18.0 185 150-346 2-216 (256)
14 cd07399 MPP_YvnB Bacillus subt 99.9 6.3E-21 1.4E-25 176.2 14.8 149 148-344 1-165 (214)
15 cd00842 MPP_ASMase acid sphing 99.8 4E-19 8.7E-24 172.8 16.0 188 152-343 42-264 (296)
16 cd08163 MPP_Cdc1 Saccharomyces 99.8 1.4E-18 3E-23 164.2 15.2 169 164-344 35-232 (257)
17 PF00149 Metallophos: Calcineu 99.8 1E-18 2.2E-23 154.7 7.2 189 148-340 1-200 (200)
18 cd07393 MPP_DR1119 Deinococcus 99.7 1E-16 2.2E-21 150.1 16.5 191 150-364 1-226 (232)
19 cd07383 MPP_Dcr2 Saccharomyces 99.7 9.7E-17 2.1E-21 146.9 15.7 150 146-344 1-180 (199)
20 cd07392 MPP_PAE1087 Pyrobaculu 99.7 1.1E-16 2.4E-21 144.8 15.4 167 150-341 1-174 (188)
21 TIGR03767 P_acnes_RR metalloph 99.7 3.1E-16 6.8E-21 155.9 17.6 94 247-343 290-395 (496)
22 TIGR03729 acc_ester putative p 99.7 3.5E-16 7.6E-21 147.3 15.9 176 149-341 1-222 (239)
23 COG1409 Icc Predicted phosphoh 99.7 1.3E-15 2.7E-20 148.0 16.5 179 148-340 1-193 (301)
24 cd07385 MPP_YkuE_C Bacillus su 99.6 4.3E-15 9.3E-20 138.4 15.4 185 147-366 1-206 (223)
25 cd07388 MPP_Tt1561 Thermus the 99.6 1.8E-14 4E-19 132.7 17.3 173 146-338 3-189 (224)
26 cd07400 MPP_YydB Bacillus subt 99.6 9.7E-15 2.1E-19 126.4 13.2 131 150-362 1-143 (144)
27 PRK11340 phosphodiesterase Yae 99.6 5E-14 1.1E-18 134.9 19.0 168 144-346 46-220 (271)
28 cd07404 MPP_MS158 Microscilla 99.6 1.4E-14 3E-19 128.7 11.0 144 150-342 1-151 (166)
29 KOG1432 Predicted DNA repair e 99.5 2E-12 4.3E-17 121.6 22.8 262 136-423 45-375 (379)
30 cd00840 MPP_Mre11_N Mre11 nucl 99.5 7.2E-14 1.6E-18 130.0 13.0 186 149-343 1-204 (223)
31 TIGR03768 RPA4764 metallophosp 99.5 6.4E-13 1.4E-17 131.1 16.9 92 248-340 292-411 (492)
32 PF14008 Metallophos_C: Iron/z 99.4 3.9E-13 8.5E-18 98.0 6.8 62 354-420 1-62 (62)
33 cd00838 MPP_superfamily metall 99.4 7.8E-12 1.7E-16 105.2 12.0 116 151-344 1-119 (131)
34 cd07379 MPP_239FB Homo sapiens 99.4 8.1E-12 1.8E-16 106.9 11.8 117 149-341 1-117 (135)
35 cd07397 MPP_DevT Myxococcus xa 99.3 4.1E-11 8.9E-16 110.7 16.2 195 148-361 1-231 (238)
36 COG1408 Predicted phosphohydro 99.3 1.5E-11 3.3E-16 117.4 12.8 76 145-221 42-120 (284)
37 PF12850 Metallophos_2: Calcin 99.2 5E-11 1.1E-15 104.2 10.2 138 148-366 1-139 (156)
38 cd08166 MPP_Cdc1_like_1 unchar 99.2 6.6E-11 1.4E-15 105.9 10.8 108 169-344 38-151 (195)
39 KOG3770 Acid sphingomyelinase 99.2 3.9E-10 8.5E-15 114.1 17.3 172 164-341 199-405 (577)
40 PRK05340 UDP-2,3-diacylglucosa 99.2 1.9E-10 4.2E-15 108.4 13.3 174 148-342 1-201 (241)
41 COG2129 Predicted phosphoester 99.2 7.2E-10 1.6E-14 99.6 14.3 178 146-344 2-191 (226)
42 cd07389 MPP_PhoD Bacillus subt 99.2 7.9E-10 1.7E-14 103.4 15.2 157 149-343 1-207 (228)
43 cd08165 MPP_MPPE1 human MPPE1 99.2 1.8E-10 3.9E-15 100.8 10.1 51 169-219 34-89 (156)
44 cd07384 MPP_Cdc1_like Saccharo 99.1 4.8E-10 1E-14 99.7 10.7 51 170-220 42-101 (171)
45 cd00841 MPP_YfcE Escherichia c 99.1 6.7E-10 1.4E-14 97.3 11.0 131 149-366 1-132 (155)
46 TIGR01854 lipid_A_lpxH UDP-2,3 99.1 2.8E-09 6.1E-14 99.8 15.7 69 151-219 2-81 (231)
47 cd07394 MPP_Vps29 Homo sapiens 99.1 1.7E-08 3.7E-13 90.4 19.8 166 149-413 1-170 (178)
48 PF14582 Metallophos_3: Metall 99.1 1.1E-09 2.3E-14 98.1 11.0 174 147-341 5-219 (255)
49 TIGR00583 mre11 DNA repair pro 99.1 1.1E-08 2.4E-13 102.5 19.0 243 146-425 2-308 (405)
50 TIGR00040 yfcE phosphoesterase 99.0 5.2E-09 1.1E-13 92.0 11.8 61 148-218 1-63 (158)
51 cd00845 MPP_UshA_N_like Escher 99.0 7.7E-09 1.7E-13 98.2 13.6 175 148-342 1-208 (252)
52 PRK09453 phosphodiesterase; Pr 99.0 2.9E-08 6.3E-13 89.4 16.3 69 148-218 1-75 (182)
53 cd07403 MPP_TTHA0053 Thermus t 99.0 3.3E-09 7.2E-14 89.8 9.0 103 151-342 1-105 (129)
54 cd08164 MPP_Ted1 Saccharomyces 98.9 8.3E-09 1.8E-13 92.3 8.5 57 164-220 34-112 (193)
55 PHA02546 47 endonuclease subun 98.9 2.4E-07 5.1E-12 91.8 19.3 72 148-219 1-89 (340)
56 cd07406 MPP_CG11883_N Drosophi 98.8 5E-08 1.1E-12 92.8 14.0 175 148-341 1-208 (257)
57 cd07410 MPP_CpdB_N Escherichia 98.8 1.2E-07 2.6E-12 91.4 15.5 182 148-341 1-231 (277)
58 cd07398 MPP_YbbF-LpxH Escheric 98.8 2.5E-08 5.4E-13 92.4 10.2 188 151-363 1-216 (217)
59 COG1768 Predicted phosphohydro 98.8 1.7E-07 3.7E-12 80.6 13.9 162 173-363 43-219 (230)
60 cd00844 MPP_Dbr1_N Dbr1 RNA la 98.8 2.9E-07 6.3E-12 87.2 15.9 178 150-346 1-235 (262)
61 cd07412 MPP_YhcR_N Bacillus su 98.7 4.1E-07 8.9E-12 88.0 15.5 189 148-342 1-243 (288)
62 COG0420 SbcD DNA repair exonuc 98.7 1.2E-07 2.6E-12 95.9 10.5 73 148-220 1-89 (390)
63 cd07411 MPP_SoxB_N Thermus the 98.6 6.6E-07 1.4E-11 85.5 14.1 156 164-340 40-219 (264)
64 cd07408 MPP_SA0022_N Staphyloc 98.6 6.9E-07 1.5E-11 85.0 13.4 182 148-342 1-215 (257)
65 COG0622 Predicted phosphoester 98.6 3.1E-06 6.8E-11 74.8 16.4 63 148-219 2-65 (172)
66 COG2908 Uncharacterized protei 98.6 1.5E-07 3.2E-12 85.7 7.8 68 151-218 1-79 (237)
67 cd07409 MPP_CD73_N CD73 ecto-5 98.5 1.3E-06 2.8E-11 84.2 13.6 173 148-341 1-219 (281)
68 cd07382 MPP_DR1281 Deinococcus 98.5 7.5E-06 1.6E-10 77.2 16.9 183 149-360 1-193 (255)
69 KOG3662 Cell division control 98.5 1.3E-06 2.8E-11 86.0 12.0 113 145-267 46-182 (410)
70 PRK04036 DNA polymerase II sma 98.5 1.9E-06 4E-11 89.6 12.9 76 145-220 241-344 (504)
71 TIGR00619 sbcd exonuclease Sbc 98.4 5.5E-07 1.2E-11 85.4 7.3 72 148-219 1-88 (253)
72 cd07386 MPP_DNA_pol_II_small_a 98.4 4E-06 8.6E-11 79.1 12.0 69 151-219 2-94 (243)
73 PRK10966 exonuclease subunit S 98.3 1.1E-06 2.3E-11 88.9 7.6 72 148-219 1-87 (407)
74 cd07424 MPP_PrpA_PrpB PrpA and 98.3 1.1E-06 2.4E-11 80.8 7.1 64 149-219 2-67 (207)
75 cd07425 MPP_Shelphs Shewanella 98.3 7.9E-07 1.7E-11 81.7 5.8 66 151-219 1-80 (208)
76 cd07405 MPP_UshA_N Escherichia 98.3 1.1E-05 2.4E-10 77.9 13.5 187 148-341 1-222 (285)
77 PRK09419 bifunctional 2',3'-cy 98.3 1.4E-05 3E-10 91.5 16.5 184 146-341 659-883 (1163)
78 TIGR00282 metallophosphoestera 98.3 5.9E-05 1.3E-09 71.4 17.3 190 148-366 1-203 (266)
79 PRK11439 pphA serine/threonine 98.2 2.9E-06 6.2E-11 78.7 7.4 73 139-218 8-82 (218)
80 PRK09968 serine/threonine-spec 98.2 4.1E-06 8.9E-11 77.6 7.3 64 148-218 15-80 (218)
81 cd07407 MPP_YHR202W_N Saccharo 98.2 4.7E-05 1E-09 73.2 14.7 179 146-340 4-231 (282)
82 COG0737 UshA 5'-nucleotidase/2 98.1 7.9E-05 1.7E-09 78.3 15.5 182 145-339 24-246 (517)
83 cd07380 MPP_CWF19_N Schizosacc 98.1 1.4E-05 3E-10 69.2 7.8 118 151-347 1-129 (150)
84 PRK09558 ushA bifunctional UDP 98.0 0.00015 3.3E-09 76.7 15.3 189 145-340 32-257 (551)
85 TIGR01530 nadN NAD pyrophospha 97.9 0.00016 3.4E-09 76.4 14.5 174 148-341 1-219 (550)
86 cd08162 MPP_PhoA_N Synechococc 97.9 0.00018 3.9E-09 70.3 13.0 71 148-221 1-93 (313)
87 cd07391 MPP_PF1019 Pyrococcus 97.8 2.6E-05 5.7E-10 69.5 5.1 52 167-219 35-88 (172)
88 PHA02239 putative protein phos 97.7 5.5E-05 1.2E-09 70.7 6.0 69 148-218 1-72 (235)
89 KOG2310 DNA repair exonuclease 97.7 6.1E-05 1.3E-09 75.6 6.3 45 145-189 11-68 (646)
90 TIGR00024 SbcD_rel_arch putati 97.7 7.1E-05 1.5E-09 69.5 6.2 69 148-218 15-101 (225)
91 PRK11907 bifunctional 2',3'-cy 97.7 0.0019 4.1E-08 70.4 17.4 184 145-340 113-354 (814)
92 PRK09419 bifunctional 2',3'-cy 97.6 0.0004 8.8E-09 79.7 12.7 186 146-341 40-281 (1163)
93 COG1311 HYS2 Archaeal DNA poly 97.6 0.00076 1.6E-08 67.6 12.7 76 145-220 223-322 (481)
94 PRK09418 bifunctional 2',3'-cy 97.6 0.0017 3.6E-08 70.7 15.8 56 280-341 234-290 (780)
95 PRK00166 apaH diadenosine tetr 97.5 0.00019 4.1E-09 68.7 5.6 66 148-218 1-68 (275)
96 COG4186 Predicted phosphoester 97.4 0.0023 5.1E-08 54.3 10.9 66 149-219 5-86 (186)
97 KOG2863 RNA lariat debranching 97.4 0.0012 2.5E-08 63.4 9.7 173 148-339 1-229 (456)
98 cd07423 MPP_PrpE Bacillus subt 97.4 0.00027 5.8E-09 66.3 5.3 68 148-218 1-79 (234)
99 cd07390 MPP_AQ1575 Aquifex aeo 97.3 0.00034 7.4E-09 62.0 5.3 63 151-219 2-82 (168)
100 PRK13625 bis(5'-nucleosyl)-tet 97.3 0.00037 8.1E-09 65.7 5.3 68 148-218 1-78 (245)
101 cd07387 MPP_PolD2_C PolD2 (DNA 97.2 0.0037 8.1E-08 58.9 11.5 133 150-285 2-176 (257)
102 TIGR01390 CycNucDiestase 2',3' 97.2 0.0058 1.3E-07 65.5 14.2 45 290-340 195-240 (626)
103 PRK09420 cpdB bifunctional 2', 97.2 0.0066 1.4E-07 65.3 14.6 58 277-340 205-263 (649)
104 cd07413 MPP_PA3087 Pseudomonas 97.2 0.00052 1.1E-08 63.7 5.2 66 150-218 1-75 (222)
105 COG1692 Calcineurin-like phosp 97.2 0.06 1.3E-06 49.5 17.9 186 148-360 1-195 (266)
106 cd07421 MPP_Rhilphs Rhilph pho 97.1 0.00077 1.7E-08 64.2 5.7 67 149-218 3-79 (304)
107 cd07381 MPP_CapA CapA and rela 97.1 0.02 4.3E-07 53.8 14.7 62 277-344 162-223 (239)
108 cd00144 MPP_PPP_family phospho 96.9 0.0011 2.4E-08 61.5 5.1 66 151-219 1-68 (225)
109 PF00041 fn3: Fibronectin type 96.9 0.0079 1.7E-07 45.9 8.6 70 53-132 2-75 (85)
110 cd07422 MPP_ApaH Escherichia c 96.8 0.0019 4E-08 61.2 5.6 63 151-218 2-66 (257)
111 COG5555 Cytolysin, a secreted 96.8 0.0015 3.3E-08 60.7 4.8 168 173-341 126-335 (392)
112 TIGR00668 apaH bis(5'-nucleosy 96.7 0.0023 4.9E-08 60.9 4.9 65 149-218 2-68 (279)
113 PF09587 PGA_cap: Bacterial ca 96.5 0.078 1.7E-06 50.1 14.5 64 275-344 169-232 (250)
114 COG1407 Predicted ICC-like pho 96.5 0.0055 1.2E-07 56.4 6.0 72 147-219 19-110 (235)
115 smart00854 PGA_cap Bacterial c 96.4 0.067 1.5E-06 50.2 13.3 62 277-344 160-221 (239)
116 PF13277 YmdB: YmdB-like prote 96.4 0.048 1E-06 50.7 11.8 177 151-360 1-191 (253)
117 KOG3325 Membrane coat complex 96.2 0.096 2.1E-06 44.2 11.0 86 318-424 97-182 (183)
118 cd07416 MPP_PP2B PP2B, metallo 95.6 0.021 4.6E-07 55.5 5.5 68 149-219 44-114 (305)
119 cd07420 MPP_RdgC Drosophila me 95.5 0.022 4.8E-07 55.6 5.4 69 149-220 52-124 (321)
120 smart00156 PP2Ac Protein phosp 95.4 0.029 6.3E-07 53.7 5.7 69 148-219 28-99 (271)
121 KOG4419 5' nucleotidase [Nucle 95.2 0.15 3.3E-06 52.7 10.5 182 145-339 40-268 (602)
122 cd07415 MPP_PP2A_PP4_PP6 PP2A, 95.2 0.028 6.2E-07 54.1 5.0 68 149-219 43-113 (285)
123 KOG3947 Phosphoesterases [Gene 95.1 0.65 1.4E-05 43.6 13.3 71 145-222 59-129 (305)
124 cd07414 MPP_PP1_PPKL PP1, PPKL 95.0 0.032 7E-07 53.9 4.9 68 149-219 51-121 (293)
125 cd07418 MPP_PP7 PP7, metalloph 95.0 0.036 7.8E-07 55.1 5.2 70 148-220 66-139 (377)
126 PTZ00239 serine/threonine prot 94.8 0.048 1E-06 52.9 5.3 67 150-219 45-114 (303)
127 PTZ00244 serine/threonine-prot 94.2 0.055 1.2E-06 52.3 4.4 67 150-219 54-123 (294)
128 PTZ00480 serine/threonine-prot 93.9 0.085 1.8E-06 51.5 4.9 68 149-219 60-130 (320)
129 KOG0196 Tyrosine kinase, EPH ( 93.7 0.26 5.7E-06 52.7 8.3 84 50-144 439-537 (996)
130 PF04042 DNA_pol_E_B: DNA poly 92.7 0.13 2.8E-06 47.1 4.0 114 150-265 1-136 (209)
131 cd07417 MPP_PP5_C PP5, C-termi 92.7 0.17 3.7E-06 49.4 4.9 69 148-219 60-132 (316)
132 smart00060 FN3 Fibronectin typ 92.4 1 2.3E-05 32.5 8.1 69 56-132 6-76 (83)
133 cd07419 MPP_Bsu1_C Arabidopsis 91.8 0.32 7E-06 47.5 5.7 68 149-219 49-127 (311)
134 cd00063 FN3 Fibronectin type 3 89.2 3 6.4E-05 31.0 8.2 68 55-132 5-76 (93)
135 KOG4221 Receptor mediating net 87.3 0.89 1.9E-05 50.9 5.3 80 50-142 615-711 (1381)
136 KOG3513 Neural cell adhesion m 83.5 3.6 7.8E-05 46.0 7.7 75 49-132 818-896 (1051)
137 KOG0371 Serine/threonine prote 75.6 3.9 8.5E-05 38.1 4.1 65 150-219 62-131 (319)
138 KOG0373 Serine/threonine speci 75.5 5 0.00011 36.4 4.7 65 150-219 48-117 (306)
139 KOG0372 Serine/threonine speci 75.4 5.2 0.00011 37.1 4.8 66 150-220 45-115 (303)
140 KOG0374 Serine/threonine speci 72.3 4.1 8.9E-05 40.1 3.7 71 149-222 60-134 (331)
141 PTZ00235 DNA polymerase epsilo 71.0 24 0.00052 33.9 8.4 76 144-219 24-122 (291)
142 KOG4221 Receptor mediating net 70.7 19 0.00041 41.0 8.5 66 64-142 534-611 (1381)
143 KOG2476 Uncharacterized conser 66.8 11 0.00024 38.1 5.4 66 147-216 5-75 (528)
144 cd07390 MPP_AQ1575 Aquifex aeo 61.6 7.7 0.00017 34.0 3.0 33 293-343 108-140 (168)
145 PF10179 DUF2369: Uncharacteri 56.8 27 0.00059 33.8 5.9 18 114-131 16-33 (300)
146 COG2248 Predicted hydrolase (m 56.1 24 0.00052 33.1 5.2 73 145-218 174-249 (304)
147 PF06874 FBPase_2: Firmicute f 55.6 8.9 0.00019 40.5 2.6 45 169-219 180-224 (640)
148 COG2843 PgsA Putative enzyme o 53.3 34 0.00074 34.2 6.1 62 276-344 210-272 (372)
149 KOG0375 Serine-threonine phosp 48.4 20 0.00044 35.1 3.6 68 149-219 89-159 (517)
150 PRK10301 hypothetical protein; 46.8 1.7E+02 0.0036 24.3 8.7 13 51-63 42-54 (124)
151 PF01108 Tissue_fac: Tissue fa 46.7 1.2E+02 0.0025 24.2 7.4 71 52-132 23-98 (107)
152 COG3855 Fbp Uncharacterized pr 43.1 19 0.00041 36.5 2.6 45 170-220 187-231 (648)
153 PF07353 Uroplakin_II: Uroplak 42.6 2.2E+02 0.0048 24.7 8.4 14 116-129 105-118 (184)
154 KOG3513 Neural cell adhesion m 38.0 99 0.0021 35.2 7.3 73 53-132 617-693 (1051)
155 PF01784 NIF3: NIF3 (NGG1p int 36.9 42 0.00091 31.4 3.8 44 294-339 55-98 (241)
156 KOG4258 Insulin/growth factor 34.5 1.5E+02 0.0032 33.0 7.6 104 51-156 486-623 (1025)
157 TIGR02855 spore_yabG sporulati 33.1 35 0.00076 32.3 2.6 50 277-339 115-165 (283)
158 cd02852 Isoamylase_N_term Isoa 33.0 57 0.0012 26.6 3.6 23 110-132 48-70 (119)
159 PHA03008 hypothetical protein; 32.5 85 0.0018 28.2 4.6 42 295-341 164-205 (234)
160 PF05582 Peptidase_U57: YabG p 32.2 42 0.00092 32.0 2.9 50 277-339 116-166 (287)
161 cd02856 Glycogen_debranching_e 32.2 60 0.0013 25.7 3.5 24 109-132 43-66 (103)
162 KOG3818 DNA polymerase epsilon 31.4 1.3E+02 0.0029 30.5 6.3 77 145-221 280-371 (525)
163 PRK10799 metal-binding protein 30.7 1.2E+02 0.0026 28.4 5.9 44 295-341 59-102 (247)
164 cd02853 MTHase_N_term Maltooli 30.3 64 0.0014 24.5 3.3 22 110-132 39-60 (85)
165 KOG0196 Tyrosine kinase, EPH ( 30.0 2.1E+02 0.0046 31.7 7.9 96 32-131 314-416 (996)
166 PF09294 Interfer-bind: Interf 29.4 45 0.00097 26.3 2.4 19 114-132 68-86 (106)
167 PF02402 Lysis_col: Lysis prot 28.5 27 0.00059 23.0 0.7 17 434-450 25-41 (46)
168 PRK11449 putative deoxyribonuc 27.4 84 0.0018 29.7 4.2 141 163-343 22-162 (258)
169 cd02860 Pullulanase_N_term Pul 27.4 80 0.0017 24.7 3.5 25 108-132 44-68 (100)
170 TIGR00486 YbgI_SA1388 dinuclea 27.2 1.4E+02 0.0031 28.0 5.7 43 294-339 59-101 (249)
171 PF09949 DUF2183: Uncharacteri 26.9 73 0.0016 25.4 3.1 30 146-177 63-92 (100)
172 TIGR03000 plancto_dom_1 Planct 25.9 1.5E+02 0.0032 22.3 4.2 24 109-132 25-48 (75)
173 PF13473 Cupredoxin_1: Cupredo 24.8 1.2E+02 0.0025 24.0 4.0 67 48-132 28-94 (104)
174 PRK10425 DNase TatD; Provision 23.9 1.1E+02 0.0023 29.1 4.1 141 163-344 18-158 (258)
175 cd04502 SGNH_hydrolase_like_7 20.6 2.4E+02 0.0051 24.2 5.5 34 171-204 48-84 (171)
176 PF13941 MutL: MutL protein 20.4 2.8E+02 0.0061 28.7 6.6 77 140-219 69-167 (457)
No 1
>PLN02533 probable purple acid phosphatase
Probab=100.00 E-value=6.4e-82 Score=635.69 Aligned_cols=406 Identities=58% Similarity=1.098 Sum_probs=360.2
Q ss_pred CCCCcccccccCCCCCccccC--CCCCCCCCeeEEEEecCCCcEEEEEEeCCCCCccEEEEeecCCCCceEEEeEeEEEe
Q 012895 26 SHVSAEEYYIRQPPRSVIQTP--NKRSESDPQQVHISLAAKDYIRVSWITDDKEAESVVEYGKLPGRYNTVATGEHTSYQ 103 (454)
Q Consensus 26 ~~~~~~~~~~r~~~~~~~~~~--~~~~~~~p~~v~l~~~~~~~~~v~W~t~~~~~~~~v~y~~~~~~~~~~~~~~~~~~~ 103 (454)
+.++++.+|+||+|+...... ..+....|+||||++++.++|+|+|.|.+. ..+.|+||++++.++.++.|+.++|+
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~qvhls~~~~~~m~V~W~T~~~-~~~~V~yG~~~~~l~~~a~g~~~~~~ 92 (427)
T PLN02533 14 VLAGNVLSYDRPGTRKNLVIHPDNEDDPTHPDQVHISLVGPDKMRISWITQDS-IPPSVVYGTVSGKYEGSANGTSSSYH 92 (427)
T ss_pred hhccCcccccCCCccccccccccCCCCCCCCceEEEEEcCCCeEEEEEECCCC-CCCEEEEecCCCCCcceEEEEEEEEe
Confidence 345578999999988755322 236788999999999999999999999974 56899999999888889998888887
Q ss_pred ee-eeecCeEEEEEECCCCCCCEEEEEeCc--cCceeEEECCCCCCCeEEEEEecCCCCCChHHHHHHhhcCCCCeEeec
Q 012895 104 FF-FYKSGKIHHVKIGPLEPATTYYYRCGG--RGPEFSFKMPPANFPIEFAIVGDLGQTEWTNSTLDHVGSKDYDVFLLP 180 (454)
Q Consensus 104 ~~-~~~~~~~~~~~l~gL~p~t~Y~Yrv~~--~s~~~~F~T~p~~~~~~f~~igD~~~~~~~~~~l~~i~~~~pd~vl~~ 180 (454)
+. .+.++++|+|+|+||+|+|+|+|||+. .+++++|+|+|...++||+++||+|...+...+++++.+.+|||||++
T Consensus 93 ~~~~~~~g~iH~v~l~~L~p~T~Y~Yrvg~~~~s~~~~F~T~p~~~~~~f~v~GDlG~~~~~~~tl~~i~~~~pD~vl~~ 172 (427)
T PLN02533 93 YLLIYRSGQINDVVIGPLKPNTVYYYKCGGPSSTQEFSFRTPPSKFPIKFAVSGDLGTSEWTKSTLEHVSKWDYDVFILP 172 (427)
T ss_pred ccccccCCeEEEEEeCCCCCCCEEEEEECCCCCccceEEECCCCCCCeEEEEEEeCCCCcccHHHHHHHHhcCCCEEEEc
Confidence 52 356899999999999999999999995 467899999998889999999999988777889999988999999999
Q ss_pred CccccCCCChhhHHHHhhhhhhhhcCCCeeecCCCcccCCCCCCCcchhhhhhhhccCCCCCCCCCCCceEEEEeCeEEE
Q 012895 181 GDLSYADFQQPLWDSFGRLVEPYASSRPWMVTEGNHEIESIPIILPHAFKAYNARWLMPYEESGSSSNLYYSFDIAGAHI 260 (454)
Q Consensus 181 GDl~y~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~v~f 260 (454)
||++|++..+..|+.|.+.++++.+.+|+++++||||....+......+..|.++|.||.++.+...+.||+|++|++||
T Consensus 173 GDl~y~~~~~~~wd~f~~~i~~l~s~~P~m~~~GNHE~~~~~~~~~~~f~~y~~rf~mP~~~~g~~~~~yYSfd~g~vhf 252 (427)
T PLN02533 173 GDLSYANFYQPLWDTFGRLVQPLASQRPWMVTHGNHELEKIPILHPEKFTAYNARWRMPFEESGSTSNLYYSFNVYGVHI 252 (427)
T ss_pred CccccccchHHHHHHHHHHhhhHhhcCceEEeCccccccccccccCcCccchhhcccCCccccCCCCCceEEEEECCEEE
Confidence 99999988888999999999999888999999999999754432234677888999999876666678999999999999
Q ss_pred EEecccCCCCCCHHHHHHHHHHHHhhccCCCCeEEEEEccccccCCCCCCCC--cHHHHHHHHHHHHhcCCcEEEecccc
Q 012895 261 IMLGSYTDFDEDSAQYKWLKADLAKINRKKTPWIFVLLHAPWYNTNTAHQGE--GESMRNSMEELLYNARVDVVFAGHVH 338 (454)
Q Consensus 261 i~Lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~~~~~~~~--~~~~~~~l~~ll~~~~v~lvl~GH~H 338 (454)
|+||++.++....+|++||+++|++.+++++||+|+++|+|+|++...+.+. ...+++.|+++|.+++||++|+||+|
T Consensus 253 I~Lds~~~~~~~~~Q~~WLe~dL~~~~r~~~pwiIv~~H~P~y~s~~~~~~~~~~~~~r~~le~Ll~~~~VdlvlsGH~H 332 (427)
T PLN02533 253 IMLGSYTDFEPGSEQYQWLENNLKKIDRKTTPWVVAVVHAPWYNSNEAHQGEKESVGMKESMETLLYKARVDLVFAGHVH 332 (427)
T ss_pred EEEeCCccccCchHHHHHHHHHHHhhcccCCCEEEEEeCCCeeecccccCCcchhHHHHHHHHHHHHHhCCcEEEeccee
Confidence 9999998877789999999999999887778999999999999876554333 23578899999999999999999999
Q ss_pred cceeeecccCCCcCCCCcEEEEECCCCCCCCcccccCCCCCCCceeeecccCEEEEEEecCCeEEEEEEEecCCCceeee
Q 012895 339 AYERFTRIYDNKADPCGPIYITIGDGGNREGLALEFKEPKSPLSMFQESSFGHARLKILDETRAHWSWYRNNDSDAVIAD 418 (454)
Q Consensus 339 ~y~r~~~~~~~~~~~~g~~yi~~G~gG~~~~~~~~~~~~~p~~~~~~~~~~G~~~l~v~~~~~~~~~~~~~~dg~~~~~D 418 (454)
.|+|+.|+++++.+++|++||++|+||+.+++...+..++|+|++|++.+|||++|+|.|.||+.|+|++++|++.++.|
T Consensus 333 ~YeR~~p~~~~~~~~~gpvyiv~G~gG~~e~~~~~~~~~~~~~s~~r~~~~G~~~l~v~n~t~l~~~~~~~~~~~~~~~D 412 (427)
T PLN02533 333 AYERFDRVYQGKTDKCGPVYITIGDGGNREGLATKYIDPKPDISLFREASFGHGQLNVVDANTMEWTWHRNDDDQSVASD 412 (427)
T ss_pred cccccccccCCccCCCCCEEEEeCCCccccccccccCCCCCCceeEEeccCCEEEEEEEcCCeEEEEEEecCCCCceeee
Confidence 99999999999999999999999999999987667888899999999999999999999999999999999999889999
Q ss_pred EEEEEEcCCCCCCC
Q 012895 419 EVRLESLSTSKQCW 432 (454)
Q Consensus 419 ~~~i~~~~~~~~~~ 432 (454)
+|||+|....++|.
T Consensus 413 ~~~i~~~~~~~~~~ 426 (427)
T PLN02533 413 SVWLKSLLTEPGCN 426 (427)
T ss_pred EEEEEeccCCCccC
Confidence 99999998889996
No 2
>KOG1378 consensus Purple acid phosphatase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=3.5e-77 Score=579.96 Aligned_cols=397 Identities=43% Similarity=0.678 Sum_probs=344.7
Q ss_pred CCCCCcccccccCCCCCccccCC-------CCCCCCCeeEEEEecC-CCcEEEEEEeCCCCCccEEEEeecCCC-----C
Q 012895 25 HSHVSAEEYYIRQPPRSVIQTPN-------KRSESDPQQVHISLAA-KDYIRVSWITDDKEAESVVEYGKLPGR-----Y 91 (454)
Q Consensus 25 ~~~~~~~~~~~r~~~~~~~~~~~-------~~~~~~p~~v~l~~~~-~~~~~v~W~t~~~~~~~~v~y~~~~~~-----~ 91 (454)
.+.++.+....|+. .+...++. +.....|+||||++++ .++|+|+|.|.+. ..+.|+|++.... .
T Consensus 10 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~peQvhlS~~~~~~~m~VswvT~~~-~~~~V~Yg~~~~~~~~~~~ 87 (452)
T KOG1378|consen 10 EINPKHTLHDINPL-PGTLHLLSESEQLTFPSVVNSPEQVHLSFTDNLNEMRVSWVTGDG-EENVVRYGEVKDKLDNSAA 87 (452)
T ss_pred eccCCCcccccccc-CcccccccccccccCcccCCCCCeEEEeccCCCCcEEEEEeCCCC-CCceEEEeecCCCcccccc
Confidence 34566677777776 44433333 3568899999999999 6699999999974 3489999977554 2
Q ss_pred ceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEEEEeCcc---CceeEEECCCC-CCCeEEEEEecCCCCCChHHHHH
Q 012895 92 NTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYYYRCGGR---GPEFSFKMPPA-NFPIEFAIVGDLGQTEWTNSTLD 167 (454)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Yrv~~~---s~~~~F~T~p~-~~~~~f~~igD~~~~~~~~~~l~ 167 (454)
+..+.+.+..|.+.++.++++|+|.+++|+|+|+||||||++ |++|+|+|||. ..+.+|+++||+|...+...++.
T Consensus 88 ~~~~~~~~~~y~~~~~~sg~ih~~~~~~L~~~t~YyY~~Gs~~~wS~~f~F~t~p~~~~~~~~~i~GDlG~~~~~~s~~~ 167 (452)
T KOG1378|consen 88 RGMTEAWTDGYANGWRDSGYIHDAVMKNLEPNTRYYYQVGSDLKWSEIFSFKTPPGQDSPTRAAIFGDMGCTEPYTSTLR 167 (452)
T ss_pred ccceEEEecccccccceeeeEeeeeecCCCCCceEEEEeCCCCCcccceEeECCCCccCceeEEEEccccccccccchHh
Confidence 334445555566666799999999999999999999999973 68999999995 68999999999999988877777
Q ss_pred Hhhc-CCCCeEeecCccccCCCCh-hhHHHHhhhhhhhhcCCCeeecCCCcccCCCCCCCcchhhhhhhhccCCCCCCCC
Q 012895 168 HVGS-KDYDVFLLPGDLSYADFQQ-PLWDSFGRLVEPYASSRPWMVTEGNHEIESIPIILPHAFKAYNARWLMPYEESGS 245 (454)
Q Consensus 168 ~i~~-~~pd~vl~~GDl~y~~~~~-~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 245 (454)
.+.. .++|+|||.|||+|++... .+||.|.++++++++.+|++++.||||++..+. ..|..|.++|.||.+++++
T Consensus 168 ~~~~~~k~d~vlhiGDlsYa~~~~n~~wD~f~r~vEp~As~vPymv~~GNHE~d~~~~---~~F~~y~~Rf~mP~~~s~s 244 (452)
T KOG1378|consen 168 NQEENLKPDAVLHIGDLSYAMGYSNWQWDEFGRQVEPIASYVPYMVCSGNHEIDWPPQ---PCFVPYSARFNMPGNSSES 244 (452)
T ss_pred HHhcccCCcEEEEecchhhcCCCCccchHHHHhhhhhhhccCceEEecccccccCCCc---ccccccceeeccCCCcCCC
Confidence 7764 4699999999999999988 699999999999999999999999999987654 2689999999999988887
Q ss_pred CCCceEEEEeCeEEEEEecccCCC--CCCHHHHHHHHHHHHhhccCCCCeEEEEEccccccCCCC-CCCCcH--HHHHHH
Q 012895 246 SSNLYYSFDIAGAHIIMLGSYTDF--DEDSAQYKWLKADLAKINRKKTPWIFVLLHAPWYNTNTA-HQGEGE--SMRNSM 320 (454)
Q Consensus 246 ~~~~~ys~~~g~v~fi~Lds~~~~--~~~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~~~~-~~~~~~--~~~~~l 320 (454)
..++||||++|++|||+|+|+.++ ..+.+|.+||+++|++++++++||+|++.|.|+|++... +..++. .+|..|
T Consensus 245 ~~~l~YSfd~G~vhfv~lsse~~~~~~~~~~QY~WL~~dL~~v~r~~tPWlIv~~HrP~Y~S~~~~~~reG~~~~~~~~L 324 (452)
T KOG1378|consen 245 DSNLYYSFDVGGVHFVVLSTETYYNFLKGTAQYQWLERDLASVDRKKTPWLIVQGHRPMYCSSNDAHYREGEFESMREGL 324 (452)
T ss_pred CCceeEEEeeccEEEEEEeccccccccccchHHHHHHHHHHHhcccCCCeEEEEecccceecCCchhhccCcchhhHHHH
Confidence 778999999999999999998774 356899999999999999865899999999999998875 555555 788999
Q ss_pred HHHHHhcCCcEEEecccccceeeecccCCCc----------CCCCcEEEEECCCCCCCCcccccCCCCCCCceeeecccC
Q 012895 321 EELLYNARVDVVFAGHVHAYERFTRIYDNKA----------DPCGPIYITIGDGGNREGLALEFKEPKSPLSMFQESSFG 390 (454)
Q Consensus 321 ~~ll~~~~v~lvl~GH~H~y~r~~~~~~~~~----------~~~g~~yi~~G~gG~~~~~~~~~~~~~p~~~~~~~~~~G 390 (454)
+++|.+++||++|+||+|.|||++|++|.+. ++++|+||++|+||+.+++.. +..++|+|++||+.+||
T Consensus 325 E~l~~~~~VDvvf~GHvH~YER~~piyn~~~~~~~~~~~~~d~~aPvyI~~G~~G~~e~~~~-~~~~~p~~Sa~R~~dfG 403 (452)
T KOG1378|consen 325 EPLFVKYKVDVVFWGHVHRYERFCPIYNNTCGTGWGPVHLVDGMAPIYITVGDGGNHEHLDP-FSSPQPEWSAFREGDFG 403 (452)
T ss_pred HHHHHHhceeEEEeccceehhccchhhcceeeccCCcccccCCCCCEEEEEccCCcccccCc-ccCCCCcccccccccCC
Confidence 9999999999999999999999999999765 889999999999999998764 44589999999999999
Q ss_pred EEEEEEecCCeEEEEEEEecCCCceeeeEEEEEEcCC
Q 012895 391 HARLKILDETRAHWSWYRNNDSDAVIADEVRLESLST 427 (454)
Q Consensus 391 ~~~l~v~~~~~~~~~~~~~~dg~~~~~D~~~i~~~~~ 427 (454)
|++|++.|+||+.|+|+++.|+++++.|+|||.|+..
T Consensus 404 ~~~L~v~N~TH~~~~~~~~~d~~g~~~D~fwl~k~~~ 440 (452)
T KOG1378|consen 404 YTRLTAKNGTHAHVHWVRNSDASGVVIDSFWLIKDYR 440 (452)
T ss_pred eEEEEEecCceEEEEEEeccCCCceEeeeEEEEcccC
Confidence 9999999999999999999999999999999999965
No 3
>cd00839 MPP_PAPs purple acid phosphatases of the metallophosphatase superfamily, metallophosphatase domain. Purple acid phosphatases (PAPs) belong to a diverse family of binuclear metallohydrolases that have been identified and characterized in plants, animals, and fungi. PAPs contain a binuclear metal center and their characteristic pink or purple color derives from a charge-transfer transition between a tyrosine residue and a chromophoric ferric ion within the binuclear center. PAPs catalyze the hydrolysis of a wide range of activated phosphoric acid mono- and di-esters and anhydrides. PAPs are distinguished from the other phosphatases by their insensitivity to L-(+) tartrate inhibition and are therefore also known as tartrate resistant acid phosphatases (TRAPs). While only a few copies of PAP-like genes are present in mammalian and fungal genomes, multiple copies are present in plant genomes. PAPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diver
Probab=100.00 E-value=2.6e-46 Score=363.71 Aligned_cols=275 Identities=45% Similarity=0.803 Sum_probs=220.2
Q ss_pred CCCeEEEEEecCCCC-CChHHHHHHhhc--CCCCeEeecCccccCCCCh--hhHHHHhhhhhhhhcCCCeeecCCCcccC
Q 012895 145 NFPIEFAIVGDLGQT-EWTNSTLDHVGS--KDYDVFLLPGDLSYADFQQ--PLWDSFGRLVEPYASSRPWMVTEGNHEIE 219 (454)
Q Consensus 145 ~~~~~f~~igD~~~~-~~~~~~l~~i~~--~~pd~vl~~GDl~y~~~~~--~~~~~~~~~~~~l~~~~P~~~v~GNHD~~ 219 (454)
+.++||+++||+|.. ....++++.+.+ .+|||||++||++|+++.. .+|+.|.+.++++...+|+++++||||..
T Consensus 2 ~~~~~f~v~gD~~~~~~~~~~~~~~l~~~~~~~d~vl~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GNHD~~ 81 (294)
T cd00839 2 DTPFKFAVFGDMGQNTNNSTNTLDHLEKELGNYDAILHVGDLAYADGYNNGSRWDTFMRQIEPLASYVPYMVTPGNHEAD 81 (294)
T ss_pred CCcEEEEEEEECCCCCCCcHHHHHHHHhccCCccEEEEcCchhhhcCCccchhHHHHHHHHHHHHhcCCcEEcCcccccc
Confidence 468999999999973 456778888865 7999999999999987664 78999999999998889999999999996
Q ss_pred CCCCCCcchhhhhhhhccCCCCCCCCCCCceEEEEeCeEEEEEecccCCC---CCCHHHHHHHHHHHHhhccCCCCeEEE
Q 012895 220 SIPIILPHAFKAYNARWLMPYEESGSSSNLYYSFDIAGAHIIMLGSYTDF---DEDSAQYKWLKADLAKINRKKTPWIFV 296 (454)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~Lds~~~~---~~~~~Q~~WL~~~L~~~~~~~~~w~Iv 296 (454)
...... ....+..++.++........+.||+|++|+++||+|||.... ....+|++||+++|+++++++.+|+||
T Consensus 82 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~Ysf~~g~v~fi~Lds~~~~~~~~~~~~q~~WL~~~L~~~~~~~~~~~iv 159 (294)
T cd00839 82 YNFSFY--KIKAFFPRFRFPHSPSGSTSNLWYSFDVGPVHFVSLSTEVDFYGDGPGSPQYDWLEADLAKVDRSKTPWIIV 159 (294)
T ss_pred cCCCCc--ccccccccccccCCCCCCCCCceEEEeeCCEEEEEEecccccccCCCCcHHHHHHHHHHHHhcccCCCeEEE
Confidence 543210 111111122233322233457899999999999999998654 467999999999999987656789999
Q ss_pred EEccccccCCCCCCC--CcHHHHHHHHHHHHhcCCcEEEecccccceeeecccCCC--------cCCCCcEEEEECCCCC
Q 012895 297 LLHAPWYNTNTAHQG--EGESMRNSMEELLYNARVDVVFAGHVHAYERFTRIYDNK--------ADPCGPIYITIGDGGN 366 (454)
Q Consensus 297 ~~H~P~~~~~~~~~~--~~~~~~~~l~~ll~~~~v~lvl~GH~H~y~r~~~~~~~~--------~~~~g~~yi~~G~gG~ 366 (454)
++|+|++........ .....++.|.++|++++|+++|+||+|.|+|++|+++++ .+++|++||++|+||+
T Consensus 160 ~~H~P~~~~~~~~~~~~~~~~~~~~l~~ll~~~~v~~vl~GH~H~y~r~~p~~~~~~~~~~~~~~~~~g~~yiv~G~~G~ 239 (294)
T cd00839 160 MGHRPMYCSNTDHDDCIEGEKMRAALEDLFYKYGVDLVLSGHVHAYERTCPVYNGTVVGDCNPYSNPKGPVHIVIGAGGN 239 (294)
T ss_pred EeccCcEecCccccccchhHHHHHHHHHHHHHhCCCEEEEccceeeEeechhhCCEeccccccccCCCccEEEEECCCcc
Confidence 999999987654322 234678999999999999999999999999999988754 4678999999999999
Q ss_pred CCCcccccCCCCCCCceeeecccCEEEEEEecCCeEEEEEEEecCCCceeeeEEEEEE
Q 012895 367 REGLALEFKEPKSPLSMFQESSFGHARLKILDETRAHWSWYRNNDSDAVIADEVRLES 424 (454)
Q Consensus 367 ~~~~~~~~~~~~p~~~~~~~~~~G~~~l~v~~~~~~~~~~~~~~dg~~~~~D~~~i~~ 424 (454)
..+..... .+.++|++++...+||++|++.+.|+|+++|+++.+|+ ++|+|+|.|
T Consensus 240 ~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~t~l~~~~~~~~~g~--v~D~f~i~k 294 (294)
T cd00839 240 DEGLDPFS-APPPAWSAFRESDYGFGRLTVHNSTHLHFEWIRNDDGV--VIDSFWIIK 294 (294)
T ss_pred ccCcCccc-CCCCCceEEEeccCCEEEEEEEecCeEEEEEEECCCCe--EEEEEEEeC
Confidence 86532212 13368899999999999999999889999999988886 999999986
No 4
>PTZ00422 glideosome-associated protein 50; Provisional
Probab=100.00 E-value=7.8e-34 Score=277.17 Aligned_cols=257 Identities=17% Similarity=0.283 Sum_probs=189.1
Q ss_pred CCCeEEEEEecCCCCCChHHHHHH-h----hcCCCCeEeecCccccCCCC---hhhHHH-Hhhhhhhhh--cCCCeeecC
Q 012895 145 NFPIEFAIVGDLGQTEWTNSTLDH-V----GSKDYDVFLLPGDLSYADFQ---QPLWDS-FGRLVEPYA--SSRPWMVTE 213 (454)
Q Consensus 145 ~~~~~f~~igD~~~~~~~~~~l~~-i----~~~~pd~vl~~GDl~y~~~~---~~~~~~-~~~~~~~l~--~~~P~~~v~ 213 (454)
...++|+++||+|.+...+..+++ | +..++||||.+||+++.+.. +++|+. |.+...... ..+||++++
T Consensus 24 ~~~l~F~~vGDwG~g~~~Q~~VA~~M~~~~~~~~~~FVls~GDNF~~Gv~sv~Dp~f~~~FE~vY~~~s~~L~~Pwy~vL 103 (394)
T PTZ00422 24 KAQLRFASLGNWGTGSKQQKLVASYLKQYAKNERVTFLVSPGSNFPGGVDGLNDPKWKHCFENVYSEESGDMQIPFFTVL 103 (394)
T ss_pred CCeEEEEEEecCCCCchhHHHHHHHHHHHHHhCCCCEEEECCccccCCCCCccchhHHhhHhhhccCcchhhCCCeEEeC
Confidence 788999999999976655554433 2 36799999999999843322 566765 444444333 358999999
Q ss_pred CCcccCCCCCCCcchhh------------------hhhhhccCCCCCCCCCCCceEEE----Ee-------------CeE
Q 012895 214 GNHEIESIPIILPHAFK------------------AYNARWLMPYEESGSSSNLYYSF----DI-------------AGA 258 (454)
Q Consensus 214 GNHD~~~~~~~~~~~~~------------------~~~~~~~~p~~~~~~~~~~~ys~----~~-------------g~v 258 (454)
||||+..+...+...+. ....+|.||. .||.+ .. ..+
T Consensus 104 GNHDy~Gn~~AQi~r~~~~y~~~~~~~~~~y~~~~~~~~RW~mP~--------~yY~~~~~f~~~~~~~~~~~~~~~~~v 175 (394)
T PTZ00422 104 GQADWDGNYNAELLKGQNVYLNGHGQTDIEYDSNNDIYPKWIMPN--------YWYHYFTHFTDTSGPSLLKSGHKDMSV 175 (394)
T ss_pred CcccccCCchhhhccccccccccccccccccccccccCCCccCCc--------hhheeeeeeecccccccccccCCCCEE
Confidence 99999765543211111 1135788884 67754 21 128
Q ss_pred EEEEecccCC-----C-CCCHHHHHHHHHHHHhhccCCCCeEEEEEccccccCCCCCCCCcHHHHHHHHHHHHhcCCcEE
Q 012895 259 HIIMLGSYTD-----F-DEDSAQYKWLKADLAKINRKKTPWIFVLLHAPWYNTNTAHQGEGESMRNSMEELLYNARVDVV 332 (454)
Q Consensus 259 ~fi~Lds~~~-----~-~~~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lv 332 (454)
.||++||... + .....|++||+++|+.+.+ .++|+||++|||+|+++.. +....++..|+++|++|+||++
T Consensus 176 ~fifiDT~~l~~~~~~~~~~~~~w~~L~~~L~~a~k-~a~WkIVvGHhPIySsG~h--g~~~~L~~~L~PLL~ky~VdlY 252 (394)
T PTZ00422 176 AFIFIDTWILSSSFPYKKVSERAWQDLKATLEYAPK-IADYIIVVGDKPIYSSGSS--KGDSYLSYYLLPLLKDAQVDLY 252 (394)
T ss_pred EEEEEECchhcccCCccccCHHHHHHHHHHHHhhcc-CCCeEEEEecCceeecCCC--CCCHHHHHHHHHHHHHcCcCEE
Confidence 9999999532 1 1247899999999976543 6789999999999998753 2334688899999999999999
Q ss_pred EecccccceeeecccCCCcCCCCcEEEEECCCCCCCCcccccCCCCCCCceeeecccCEEEEEEecCCeEEEEEEEecCC
Q 012895 333 FAGHVHAYERFTRIYDNKADPCGPIYITIGDGGNREGLALEFKEPKSPLSMFQESSFGHARLKILDETRAHWSWYRNNDS 412 (454)
Q Consensus 333 l~GH~H~y~r~~~~~~~~~~~~g~~yi~~G~gG~~~~~~~~~~~~~p~~~~~~~~~~G~~~l~v~~~~~~~~~~~~~~dg 412 (454)
|+||+|.+|+.. .+++.||++|+||+..+.. . ..++++.|.....||..+++ +.+.+.++|++..+|
T Consensus 253 isGHDH~lq~i~--------~~gt~yIvSGaGs~~~~~~--~--~~~~~s~F~~~~~GF~~~~l-~~~~l~~~fid~~~G 319 (394)
T PTZ00422 253 ISGYDRNMEVLT--------DEGTAHINCGSGGNSGRKS--I--MKNSKSLFYSEDIGFCIHEL-NAEGMVTKFVSGNTG 319 (394)
T ss_pred EEccccceEEec--------CCCceEEEeCccccccCCC--C--CCCCCcceecCCCCEEEEEE-ecCEEEEEEEeCCCC
Confidence 999999999975 3589999999998754321 1 22455888888999999997 567999999976678
Q ss_pred CceeeeEEEEEEcCC
Q 012895 413 DAVIADEVRLESLST 427 (454)
Q Consensus 413 ~~~~~D~~~i~~~~~ 427 (454)
+ +++++++.++..
T Consensus 320 k--vL~~~~~~~~~~ 332 (394)
T PTZ00422 320 E--VLYTHKQPLKKR 332 (394)
T ss_pred c--EEEEeeecccch
Confidence 7 999999987754
No 5
>cd07378 MPP_ACP5 Homo sapiens acid phosphatase 5 and related proteins, metallophosphatase domain. Acid phosphatase 5 (ACP5) removes the mannose 6-phosphate recognition marker from lysosomal proteins. The exact site of dephosphorylation is not clear. Evidence suggests dephosphorylation may take place in a prelysosomal compartment as well as in the lysosome. ACP5 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site ma
Probab=100.00 E-value=3.1e-32 Score=262.58 Aligned_cols=240 Identities=22% Similarity=0.385 Sum_probs=171.9
Q ss_pred eEEEEEecCCCCC-ChH-HH---HHH-hhcCCCCeEeecCccccCCCC----hhhH-HHHhhhhhhhhcCCCeeecCCCc
Q 012895 148 IEFAIVGDLGQTE-WTN-ST---LDH-VGSKDYDVFLLPGDLSYADFQ----QPLW-DSFGRLVEPYASSRPWMVTEGNH 216 (454)
Q Consensus 148 ~~f~~igD~~~~~-~~~-~~---l~~-i~~~~pd~vl~~GDl~y~~~~----~~~~-~~~~~~~~~l~~~~P~~~v~GNH 216 (454)
++|+++||+|... ..+ .+ +.. +++.+|||||++||++|+++. ...| +.|.+.+..+...+|+++++|||
T Consensus 1 ~~f~~~gD~g~~~~~~~~~~~~~~~~~~~~~~~dfvv~~GD~~y~~g~~~~~~~~~~~~~~~~~~~~~~~~P~~~v~GNH 80 (277)
T cd07378 1 LRFLALGDWGGGGTAGQKAVAKAMAKVAAELGPDFILSLGDNFYDDGVGSVDDPRFETTFEDVYSAPSLQVPWYLVLGNH 80 (277)
T ss_pred CeEEEEeecCCCCCHHHHHHHHHHHHHHHhcCCCEEEeCCCccccCCCCCCcchHHHHHHHHHccchhhcCCeEEecCCc
Confidence 5899999999852 222 22 222 235799999999999987764 2233 34555555454569999999999
Q ss_pred ccCCCCCCCcchhhh--hhhhccCCCCCCCCCCCceEEEEeC------eEEEEEecccCCC---------------CCCH
Q 012895 217 EIESIPIILPHAFKA--YNARWLMPYEESGSSSNLYYSFDIA------GAHIIMLGSYTDF---------------DEDS 273 (454)
Q Consensus 217 D~~~~~~~~~~~~~~--~~~~~~~p~~~~~~~~~~~ys~~~g------~v~fi~Lds~~~~---------------~~~~ 273 (454)
|+..+.... ..+.. +..+|.+| ..||+|+++ +++||+|||.... ..+.
T Consensus 81 D~~~~~~~~-~~~~~~~~~~~~~~~--------~~~y~~~~~~~~~~~~~~~i~LDt~~~~~~~~~~~~~~~~~~~~~~~ 151 (277)
T cd07378 81 DYSGNVSAQ-IDYTKRPNSPRWTMP--------AYYYRVSFPFPSSDTTVEFIMIDTVPLCGNSDDIASPYGPPNGKLAE 151 (277)
T ss_pred ccCCCchhe-eehhccCCCCCccCc--------chheEEEeecCCCCCEEEEEEEeChhHcCccccccccccCcchhhHH
Confidence 996432100 01111 12233333 479999988 7999999996421 1358
Q ss_pred HHHHHHHHHHHhhccCCCCeEEEEEccccccCCCCCCCCcHHHHHHHHHHHHhcCCcEEEecccccceeeecccCCCcCC
Q 012895 274 AQYKWLKADLAKINRKKTPWIFVLLHAPWYNTNTAHQGEGESMRNSMEELLYNARVDVVFAGHVHAYERFTRIYDNKADP 353 (454)
Q Consensus 274 ~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~y~r~~~~~~~~~~~ 353 (454)
+|++||+++|+++. .+|+||++|+|+++..... .....++.|.+++++++|+++|+||+|.+++..+ +.
T Consensus 152 ~Q~~wL~~~L~~~~---~~~~iv~~H~P~~~~~~~~--~~~~~~~~l~~l~~~~~v~~vl~GH~H~~~~~~~------~~ 220 (277)
T cd07378 152 EQLAWLEKTLAAST---ADWKIVVGHHPIYSSGEHG--PTSCLVDRLLPLLKKYKVDAYLSGHDHNLQHIKD------DG 220 (277)
T ss_pred HHHHHHHHHHHhcC---CCeEEEEeCccceeCCCCC--CcHHHHHHHHHHHHHcCCCEEEeCCcccceeeec------CC
Confidence 99999999999874 3799999999998765322 2245788999999999999999999999998764 13
Q ss_pred CCcEEEEECCCCCCCCcccccCCCCCCCceeeecccCEEEEEEecCCeEEEEEEE
Q 012895 354 CGPIYITIGDGGNREGLALEFKEPKSPLSMFQESSFGHARLKILDETRAHWSWYR 408 (454)
Q Consensus 354 ~g~~yi~~G~gG~~~~~~~~~~~~~p~~~~~~~~~~G~~~l~v~~~~~~~~~~~~ 408 (454)
.++.||++|+||...+.........|.|..++...+||.+|+|.+ ..+.++|+.
T Consensus 221 ~~~~~i~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~Gy~~i~v~~-~~l~~~~~~ 274 (277)
T cd07378 221 SGTSFVVSGAGSKARPSVKHIDKVPQFFSGFTSSGGGFAYLELTK-EELTVRFYD 274 (277)
T ss_pred CCcEEEEeCCCcccCCCCCccCcccccccccccCCCCEEEEEEec-CEEEEEEEC
Confidence 589999999998876543222222345678888899999999965 599999986
No 6
>cd07395 MPP_CSTP1 Homo sapiens CSTP1 and related proteins, metallophosphatase domain. CSTP1 (complete S-transactivated protein 1) is an uncharacterized Homo sapiens protein with a metallophosphatase domain, that is transactivated by the complete S protein of hepatitis B virus. CSTP1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is th
Probab=99.96 E-value=2.5e-28 Score=233.36 Aligned_cols=227 Identities=20% Similarity=0.311 Sum_probs=161.2
Q ss_pred CCCeEEEEEecCCCCCC-----------------hHHHHHHhhcC--CCCeEeecCccccCCCCh----hhHHHHhhhhh
Q 012895 145 NFPIEFAIVGDLGQTEW-----------------TNSTLDHVGSK--DYDVFLLPGDLSYADFQQ----PLWDSFGRLVE 201 (454)
Q Consensus 145 ~~~~~f~~igD~~~~~~-----------------~~~~l~~i~~~--~pd~vl~~GDl~y~~~~~----~~~~~~~~~~~ 201 (454)
+.+++|+++||+|.+.. .+.+++.+.+. +||+||++||+++.+... .+|+.+.+.++
T Consensus 2 ~~~~~f~~~sD~h~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~pd~ii~~GDl~~~~~~~~~~~~~~~~~~~~~~ 81 (262)
T cd07395 2 SGPFYFIQGADPQLGLIKKNLEGGGDEWDEEIKLTEQAVQAINKLNPKPKFVVVCGDLVNAMPGDELRERQVSDLKDVLS 81 (262)
T ss_pred CCCEEEEEecCCccchhhccccCchhhhhhHHHHHHHHHHHHHhcCCCCCEEEEeCCcCCCCcchhhHHHHHHHHHHHHh
Confidence 46899999999987631 12345556555 999999999999876543 34556666666
Q ss_pred hhhcCCCeeecCCCcccCCCCCCCcchhhhhhhhccCCCCCCCCCCCceEEEEeCeEEEEEecccCCC------CCCHHH
Q 012895 202 PYASSRPWMVTEGNHEIESIPIILPHAFKAYNARWLMPYEESGSSSNLYYSFDIAGAHIIMLGSYTDF------DEDSAQ 275 (454)
Q Consensus 202 ~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~Lds~~~~------~~~~~Q 275 (454)
.+...+|+++++||||+...+. ...+..|...|. ..||++++++++||+|||.... ....+|
T Consensus 82 ~~~~~vp~~~i~GNHD~~~~~~--~~~~~~f~~~~g----------~~~y~~~~~~~~~i~lds~~~~~~~~~~~~~~~q 149 (262)
T cd07395 82 LLDPDIPLVCVCGNHDVGNTPT--EESIKDYRDVFG----------DDYFSFWVGGVFFIVLNSQLFFDPSEVPELAQAQ 149 (262)
T ss_pred hccCCCcEEEeCCCCCCCCCCC--hhHHHHHHHHhC----------CcceEEEECCEEEEEeccccccCccccccchHHH
Confidence 6655689999999999954332 122334443332 3588999999999999985421 235799
Q ss_pred HHHHHHHHHhhccCCCCeEEEEEccccccCCCCCC----CCcHHHHHHHHHHHHhcCCcEEEecccccceeeecccCCCc
Q 012895 276 YKWLKADLAKINRKKTPWIFVLLHAPWYNTNTAHQ----GEGESMRNSMEELLYNARVDVVFAGHVHAYERFTRIYDNKA 351 (454)
Q Consensus 276 ~~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~~~~~~----~~~~~~~~~l~~ll~~~~v~lvl~GH~H~y~r~~~~~~~~~ 351 (454)
++||+++|+++++.+.+++||++|+|++....... ......+++|.++|++++|+++||||+|.+....
T Consensus 150 l~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~V~~v~~GH~H~~~~~~------- 222 (262)
T cd07395 150 DVWLEEQLEIAKESDCKHVIVFQHIPWFLEDPDEEDSYFNIPKSVRKPLLDKFKKAGVKAVFSGHYHRNAGGR------- 222 (262)
T ss_pred HHHHHHHHHHHHhccCCcEEEEECcCCccCCCCCCcccCCcCHHHHHHHHHHHHhcCceEEEECccccCCceE-------
Confidence 99999999998643456899999999986443211 1223568899999999999999999999977643
Q ss_pred CCCCcEEEEECCCCCCCCcccccCCCCCCCceeeecccCEEEEEEecCCeEEEEEEE
Q 012895 352 DPCGPIYITIGDGGNREGLALEFKEPKSPLSMFQESSFGHARLKILDETRAHWSWYR 408 (454)
Q Consensus 352 ~~~g~~yi~~G~gG~~~~~~~~~~~~~p~~~~~~~~~~G~~~l~v~~~~~~~~~~~~ 408 (454)
..|+.|+++++.|.. +.. ...||..+++.. ..+.++|+.
T Consensus 223 -~~g~~~~~~~~~~~~------~~~----------~~~g~~~~~v~~-~~~~~~~~~ 261 (262)
T cd07395 223 -YGGLEMVVTSAIGAQ------LGN----------DKSGLRIVKVTE-DKIVHEYYS 261 (262)
T ss_pred -ECCEEEEEcCceecc------cCC----------CCCCcEEEEECC-Cceeeeeee
Confidence 137778877776642 111 235888999854 456787763
No 7
>PF09423 PhoD: PhoD-like phosphatase; InterPro: IPR018946 This entry contains a number of putative proteins as well as Alkaline phosphatase D which catalyses the reaction: A phosphate monoester + H(2)O = an alcohol + phosphate ; PDB: 2YEQ_B.
Probab=99.96 E-value=1.1e-27 Score=246.00 Aligned_cols=340 Identities=20% Similarity=0.260 Sum_probs=176.2
Q ss_pred EEecC-CCcEEEEEEeCCC----------CCccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEE
Q 012895 59 ISLAA-KDYIRVSWITDDK----------EAESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYY 127 (454)
Q Consensus 59 l~~~~-~~~~~v~W~t~~~----------~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~ 127 (454)
|++|+ ..+.+|.|.+... +....+++.+++........+...+- ...++++++.|+||+|+|+|+
T Consensus 3 vasGdp~~~svilWtR~~~~~~~~~~~~~~~~V~~~va~d~~~~~~~~~~~~~~~----~~~d~t~~v~v~gL~p~t~Y~ 78 (453)
T PF09423_consen 3 VASGDPTPDSVILWTRVTPPAAAGGMPKAPVPVRWEVATDPEFSNVVRSGTVTTT----AERDFTVKVDVTGLQPGTRYY 78 (453)
T ss_dssp EEEE---SS-EEEEEE--SBGGTB---SS-EEEEEEEESSTTSSSEEEEEEEEE-----GGGTTEEEEEE-S--TT-EEE
T ss_pred ccccCCCCCEEEEEEEecCcccCCCCCCCcEEEEEEEECCCCccceEEecceecc----cCCCeEeecccCCCCCCceEE
Confidence 77888 6667778988865 34556667766666555555554332 267899999999999999999
Q ss_pred EEeCc-----cCceeEEECCCC--CCCeEEEEEecCCCCCChHHHHHHhhc-CCCCeEeecCccccCCCC----------
Q 012895 128 YRCGG-----RGPEFSFKMPPA--NFPIEFAIVGDLGQTEWTNSTLDHVGS-KDYDVFLLPGDLSYADFQ---------- 189 (454)
Q Consensus 128 Yrv~~-----~s~~~~F~T~p~--~~~~~f~~igD~~~~~~~~~~l~~i~~-~~pd~vl~~GDl~y~~~~---------- 189 (454)
||+.. .+..++|+|+|. ...+||++.||.+.......+++.|.+ .+|||+||+||.+|.+..
T Consensus 79 Y~~~~~~~~~~s~~g~~rT~p~~~~~~~r~a~~SC~~~~~~~~~~~~~~a~~~~~D~~l~lGD~IY~d~~~~~~~~~~~~ 158 (453)
T PF09423_consen 79 YRFVVDGGGQTSPVGRFRTAPDGDPDPFRFAFGSCQNYEDGYFPAYRRIAERDDPDFVLHLGDQIYEDGGGGYGNLSRRP 158 (453)
T ss_dssp EEEEE--TTEE---EEEE--TT-----EEEEEE----CCC---HHHHHHTT-S--SEEEE-S-SS----TTSS--TT---
T ss_pred EEEEEecCCCCCCceEEEcCCCCCCCceEEEEECCCCcccChHHHHHhhhccCCCcEEEEeCCeeeccCCcccccccccc
Confidence 99875 357899999986 357999999999875555788899987 699999999999998852
Q ss_pred -----------------hhhHHHH--hhhhhhhhcCCCeeecCCCcccCCCCCCC----------------cchhhhhhh
Q 012895 190 -----------------QPLWDSF--GRLVEPYASSRPWMVTEGNHEIESIPIIL----------------PHAFKAYNA 234 (454)
Q Consensus 190 -----------------~~~~~~~--~~~~~~l~~~~P~~~v~GNHD~~~~~~~~----------------~~~~~~~~~ 234 (454)
...|..+ ...++.+.+.+|+++++.+||+.++.... ...+..|.+
T Consensus 159 ~~r~~~p~~~~~~l~~yR~~y~~~~~~p~l~~~~~~~P~~~iwDDHdi~nn~~~~~~~~~~~~~~~~~~~~~~a~~ay~e 238 (453)
T PF09423_consen 159 IGRAPEPAHEAETLDDYRRRYRQYRSDPDLRRLHANVPWIMIWDDHDIGNNWWGDGAENHQDTSGDFQDRRRAAYQAYFE 238 (453)
T ss_dssp S-----SSSS--SHHHHHHHHHHHHT-HHHHHHHHHSEEEE---STTTSTT-BTTB-STT---HHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccHHHHHHHHHHHcCCHHHHHHhhcccEEEEccCceecccccCCccccccccccchHHHHHHHHHHHHh
Confidence 0112111 13455566779999999999997554310 011223333
Q ss_pred hccCCCCC-CCCCCCceEEEEeCe-EEEEEecccCCC---------------------CCCHHHHHHHHHHHHhhccCCC
Q 012895 235 RWLMPYEE-SGSSSNLYYSFDIAG-AHIIMLGSYTDF---------------------DEDSAQYKWLKADLAKINRKKT 291 (454)
Q Consensus 235 ~~~~p~~~-~~~~~~~~ys~~~g~-v~fi~Lds~~~~---------------------~~~~~Q~~WL~~~L~~~~~~~~ 291 (454)
+.+..... .+.....|++|.+|+ +.|++||+.... ..+.+|++||++.|.+. .+
T Consensus 239 ~~p~r~~~~~~~~~~~y~~~~~G~~~~~~~LD~R~~R~~~~~~~~~~~~~~~~~~~~~mLG~~Q~~wL~~~L~~s---~a 315 (453)
T PF09423_consen 239 YQPVRNPDPPGDQGRIYRSFRYGDLVEFFMLDTRSYRSPPPCDGPGDTCPAADDPSRTMLGEEQWDWLEDWLASS---QA 315 (453)
T ss_dssp HS---GGG-BTTB----EEEEETTTEEEEE--SSSS----CCCSSEE--HHHH-TT--SS-HHHHHHHHHHHHH-----S
T ss_pred hcCccCCCccCCCCceEEEEecCCceeEEEEechhccccccccccccccccccCCccCcCCHHHHHHHHHHHhcC---CC
Confidence 33222111 122346799999999 999999985321 13789999999999987 47
Q ss_pred CeEEEEEccccccCCCCC-----------CCCcHHHHHHHHHHHHhcCCc--EEEecccccceeeecccCCC--cCCC-C
Q 012895 292 PWIFVLLHAPWYNTNTAH-----------QGEGESMRNSMEELLYNARVD--VVFAGHVHAYERFTRIYDNK--ADPC-G 355 (454)
Q Consensus 292 ~w~Iv~~H~P~~~~~~~~-----------~~~~~~~~~~l~~ll~~~~v~--lvl~GH~H~y~r~~~~~~~~--~~~~-g 355 (454)
+|+||+.-.|+....... ...-...|++|.++|.+.++. ++|+|++|......-..+.. .... .
T Consensus 316 ~~kvi~s~v~~~~~~~~~~~~~~~~~~d~W~g~~~er~~Ll~~l~~~~~~~vV~LSGDvH~~~~~~~~~~~~~~~~~~~~ 395 (453)
T PF09423_consen 316 TWKVIGSSVPFSPLNFPDAAEGLPFNMDSWDGYPAERQRLLDFLRESGIRNVVFLSGDVHASAASRIPPDDADPPDGPGS 395 (453)
T ss_dssp SEEEEE-SS--S---SS-SS-S--EETTSGGGSHHHHHHHHHHHHHTT---EEEEE-SSSSEEEEEEESSTT---TTS-E
T ss_pred cEEEEEeCCceecccccccccccccCCCchhhCHHHHHHHHHHHHhhCCCCEEEEecCcchheeeecccccccccCCCCC
Confidence 899999988875432211 111235789999999888764 89999999965544222211 0111 1
Q ss_pred c-EEEEECCCCCCC-Cc------ccccCCCCCCCceeeecccCEEEEEEecCCeEEEEE
Q 012895 356 P-IYITIGDGGNRE-GL------ALEFKEPKSPLSMFQESSFGHARLKILDETRAHWSW 406 (454)
Q Consensus 356 ~-~yi~~G~gG~~~-~~------~~~~~~~~p~~~~~~~~~~G~~~l~v~~~~~~~~~~ 406 (454)
+ +-+++++=.+.. ++ ...+...+|...-++...+||..|++. ...++.+|
T Consensus 396 ~~~Ef~~s~vts~~~~~~~~~~~~~~~~~~np~~~~~~~~~~G~~~i~~~-~~~~~~~~ 453 (453)
T PF09423_consen 396 VGVEFTSSSVTSPGFGLGTSPALDRALDKANPHLKFADLRNFGYVEIDIT-PERVTAEW 453 (453)
T ss_dssp EEEEEE---SSTT-S-BSB-TTHHH-HHHH-TTEEEEE-B-EEEEEEEEE-TTEEEEEE
T ss_pred eEEEEECCCccCCCcccccchhhhhhhhhcCCceEEeECCCCcEEEEEEc-cceEEEEC
Confidence 2 223333211111 00 001112245534445578999999984 46777765
No 8
>COG3540 PhoD Phosphodiesterase/alkaline phosphatase D [Inorganic ion transport and metabolism]
Probab=99.96 E-value=1.2e-28 Score=238.66 Aligned_cols=277 Identities=21% Similarity=0.304 Sum_probs=203.8
Q ss_pred eeEEEEecC-CCcEEEEEEeCCC-------CCccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEE
Q 012895 55 QQVHISLAA-KDYIRVSWITDDK-------EAESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTY 126 (454)
Q Consensus 55 ~~v~l~~~~-~~~~~v~W~t~~~-------~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y 126 (454)
.+..|++|| .....|.|.+-++ +.+..+|+++++.+.+.+..++..+.. ..++.+++.++||+|++.|
T Consensus 39 F~~GVaSGDp~~~svviWTRl~P~p~~~g~~v~V~wEvs~~~~f~~ivr~gt~~a~p----~~dhtv~v~~~gL~P~~~y 114 (522)
T COG3540 39 FTHGVASGDPTATSVVIWTRLDPEPLNGGRPVPVIWEVSTDENFSNIVRKGTVIASP----ELDHTVHVDLRGLSPDQDY 114 (522)
T ss_pred cccccccCCCCCCeEEEEEccCCccccCCCCcceEEEecCCccHHHHHhcCCccCCc----ccCceEEEeccCCCCCceE
Confidence 445599999 6777889998751 567899999999988887777655444 6789999999999999999
Q ss_pred EEEeCc---cCceeEEECCCC-CCCeEEEEEecCCCCCC---hHHHHHHhhcCCCCeEeecCccccCCCCh---------
Q 012895 127 YYRCGG---RGPEFSFKMPPA-NFPIEFAIVGDLGQTEW---TNSTLDHVGSKDYDVFLLPGDLSYADFQQ--------- 190 (454)
Q Consensus 127 ~Yrv~~---~s~~~~F~T~p~-~~~~~f~~igD~~~~~~---~~~~l~~i~~~~pd~vl~~GDl~y~~~~~--------- 190 (454)
+||+.. .+..++|||+|. ...++|+.++|.....+ ..++++.|.+.+||||||+||.+|+++..
T Consensus 115 fYRf~~~~~~spvGrtrTapa~~~~i~~~~fa~ascQ~~~~gy~~aY~~ma~~~~D~viH~GDyIYeyg~~~~~~~~~~~ 194 (522)
T COG3540 115 FYRFKAGDERSPVGRTRTAPAPGRAIRFVWFADASCQGWEIGYMTAYKTMAKEEPDFVIHLGDYIYEYGPIPDEVSLNSW 194 (522)
T ss_pred EEEEeeCCccccccccccCCCCCCcchhhhhhhccccccccchhHHHHHHHhcCCCEEEEcCCeeeccCCcccccccccc
Confidence 999865 367899999998 67788888888755544 45788899999999999999999987651
Q ss_pred --------------------hhHHH--HhhhhhhhhcCCCeeecCCCcccCCCCCC---------Cc--------chhhh
Q 012895 191 --------------------PLWDS--FGRLVEPYASSRPWMVTEGNHEIESIPII---------LP--------HAFKA 231 (454)
Q Consensus 191 --------------------~~~~~--~~~~~~~l~~~~P~~~v~GNHD~~~~~~~---------~~--------~~~~~ 231 (454)
.+|.. ..+.++.+.+..||++.|.+||..++-.. .. ..+++
T Consensus 195 ~~~~~~~~~~~ei~TLddYR~rya~y~~D~nLqaahA~~Pwi~~WDDHEv~NN~~~~~~~nD~~~~~k~~~~r~a~A~qA 274 (522)
T COG3540 195 KNVVVTQHKSKEIETLDDYRGRYAYYKTDENLQAAHAAFPWIVQWDDHEVANNWSNSIDENDSRYDEKDFVLRAAAARQA 274 (522)
T ss_pred cccccCCCCCcceeeHHHHhhHHhhhcccHHHHHhhccCCEEEEeccccccccccccccccCCCCChHHHHHHHHHHHHH
Confidence 11111 22456667778999999999999865321 00 12234
Q ss_pred hhhhccCCCCCCC--CCCCceEEEEeCe-EEEEEecccCCC----------------------CCCHHHHHHHHHHHHhh
Q 012895 232 YNARWLMPYEESG--SSSNLYYSFDIAG-AHIIMLGSYTDF----------------------DEDSAQYKWLKADLAKI 286 (454)
Q Consensus 232 ~~~~~~~p~~~~~--~~~~~~ys~~~g~-v~fi~Lds~~~~----------------------~~~~~Q~~WL~~~L~~~ 286 (454)
|.+. ||-.... .....|.+|.+|+ +.|.+||+.... ..|..|.+||++.|..+
T Consensus 275 yyE~--mPiR~~~~p~~~~lYR~~tyG~La~~~~LDtR~YR~dqp~~dg~~~~~q~~~~~~~~mlG~~QeqWLk~~L~~S 352 (522)
T COG3540 275 YYEH--MPIRYSSLPTDGRLYRSFTYGPLADLFVLDTRSYRTDQPCGDGNPPNCQAVAGSAATMLGEQQEQWLKRGLGAS 352 (522)
T ss_pred HHHh--CccccccCCccceeeeeeccccccceeeeehhhhccccccCCCCcchhhhhhCccccchhhHHHHHHHhhhhhc
Confidence 4443 4443222 2357899999999 789999985321 13789999999999997
Q ss_pred ccCCCCeEEEEEcccccc----CC---CCC----CC-Cc-HHHHHHHHHHHHhcCCc--EEEecccccc
Q 012895 287 NRKKTPWIFVLLHAPWYN----TN---TAH----QG-EG-ESMRNSMEELLYNARVD--VVFAGHVHAY 340 (454)
Q Consensus 287 ~~~~~~w~Iv~~H~P~~~----~~---~~~----~~-~~-~~~~~~l~~ll~~~~v~--lvl~GH~H~y 340 (454)
++.|+|+....|+-. .. ... .+ ++ ...|+.|..++...++. ++|+|.+|..
T Consensus 353 ---katWnVia~q~~~~~~~~d~~~a~~~~~a~~D~wdGy~~~RerLl~fi~~~~~~N~V~LtgDvH~~ 418 (522)
T COG3540 353 ---KATWNVIAQQMPLGLVVFDGSPATEGQEANADGWDGYPAGRERLLRFIADRKIRNTVVLTGDVHYS 418 (522)
T ss_pred ---chhhhhhhhhcceeEeecCCCccccCccccccCcCCCcccHHHHHHHHHhcCCCCcEEEechhHHH
Confidence 778999999988621 11 000 00 11 24689999999998765 9999999973
No 9
>KOG2679 consensus Purple (tartrate-resistant) acid phosphatase [Posttranslational modification, protein turnover, chaperones]
Probab=99.94 E-value=4.7e-26 Score=205.34 Aligned_cols=264 Identities=20% Similarity=0.342 Sum_probs=170.2
Q ss_pred EEECCCC-CCCeEEEEEecCCCCCC-hHHHH----HHh-hcCCCCeEeecCccccCCCChhhHHH-----Hhhhhhhhhc
Q 012895 138 SFKMPPA-NFPIEFAIVGDLGQTEW-TNSTL----DHV-GSKDYDVFLLPGDLSYADFQQPLWDS-----FGRLVEPYAS 205 (454)
Q Consensus 138 ~F~T~p~-~~~~~f~~igD~~~~~~-~~~~l----~~i-~~~~pd~vl~~GDl~y~~~~~~~~~~-----~~~~~~~l~~ 205 (454)
+|.-|+. ++.++|+++||+|..+. .+..+ ..| +..++||||-+||++|+++.....|. |.+....-.-
T Consensus 33 ~l~~p~~~dgslsflvvGDwGr~g~~nqs~va~qmg~ige~l~idfvlS~GDNfYd~G~~~~~Dp~Fq~sF~nIYT~pSL 112 (336)
T KOG2679|consen 33 RLYDPAKSDGSLSFLVVGDWGRRGSFNQSQVALQMGEIGEKLDIDFVLSTGDNFYDTGLTSENDPRFQDSFENIYTAPSL 112 (336)
T ss_pred hhcCCCCCCCceEEEEEcccccCCchhHHHHHHHHHhHHHhccceEEEecCCcccccCCCCCCChhHHhhhhhcccCccc
Confidence 3555555 68899999999986543 22221 222 36799999999999999887443332 2222211112
Q ss_pred CCCeeecCCCcccCCCCCCCcc-hhhhhhhhccCCCCCCCCCCCceEE----EEe--CeEEEEEecccCC-------CC-
Q 012895 206 SRPWMVTEGNHEIESIPIILPH-AFKAYNARWLMPYEESGSSSNLYYS----FDI--AGAHIIMLGSYTD-------FD- 270 (454)
Q Consensus 206 ~~P~~~v~GNHD~~~~~~~~~~-~~~~~~~~~~~p~~~~~~~~~~~ys----~~~--g~v~fi~Lds~~~-------~~- 270 (454)
+.|||.+.||||+.++...+.. -+.....+|..|. .||. .+. -++.++++|+... +.
T Consensus 113 QkpWy~vlGNHDyrGnV~AQls~~l~~~d~RW~c~r--------sf~~~ae~ve~f~v~~~~f~~d~~~~~~~~~ydw~~ 184 (336)
T KOG2679|consen 113 QKPWYSVLGNHDYRGNVEAQLSPVLRKIDKRWICPR--------SFYVDAEIVEMFFVDTTPFMDDTFTLCTDDVYDWRG 184 (336)
T ss_pred ccchhhhccCccccCchhhhhhHHHHhhccceeccc--------HHhhcceeeeeeccccccchhhheeccccccccccc
Confidence 3799999999999876543211 1344445666553 2221 111 1234444444221 11
Q ss_pred ------CCHHHHHHHHHHHHhhccCCCCeEEEEEccccccCCCCCCCCcHHHHHHHHHHHHhcCCcEEEecccccceeee
Q 012895 271 ------EDSAQYKWLKADLAKINRKKTPWIFVLLHAPWYNTNTAHQGEGESMRNSMEELLYNARVDVVFAGHVHAYERFT 344 (454)
Q Consensus 271 ------~~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~y~r~~ 344 (454)
....++.||+..|+++ .++|+||++|||+.+.+ +.+...+++++|.++|++++||++++||+|..|...
T Consensus 185 v~PR~~~~~~~l~~le~~L~~S---~a~wkiVvGHh~i~S~~--~HG~T~eL~~~LlPiL~~n~VdlY~nGHDHcLQhis 259 (336)
T KOG2679|consen 185 VLPRVKYLRALLSWLEVALKAS---RAKWKIVVGHHPIKSAG--HHGPTKELEKQLLPILEANGVDLYINGHDHCLQHIS 259 (336)
T ss_pred CChHHHHHHHHHHHHHHHHHHh---hcceEEEecccceehhh--ccCChHHHHHHHHHHHHhcCCcEEEecchhhhhhcc
Confidence 1367889999999998 77899999999997765 345667899999999999999999999999988865
Q ss_pred cccCCCcCCCCcEEEEECCCCCCCCcccccC-CCCCCCceeeecccCEEEEEEecCCeEEEEEEEecCCCceeeeEEEEE
Q 012895 345 RIYDNKADPCGPIYITIGDGGNREGLALEFK-EPKSPLSMFQESSFGHARLKILDETRAHWSWYRNNDSDAVIADEVRLE 423 (454)
Q Consensus 345 ~~~~~~~~~~g~~yi~~G~gG~~~~~~~~~~-~~~p~~~~~~~~~~G~~~l~v~~~~~~~~~~~~~~dg~~~~~D~~~i~ 423 (454)
-. ..++.|+++|+|... ....+.. .-.|+...|.-..-||.-+++ ....+++.|++. .|+ ++.+....
T Consensus 260 ~~------e~~iqf~tSGagSka-w~g~~~~~~~~p~~lkF~YdgqGfmsv~i-s~~e~~vvfyD~-~G~--~Lhk~~t~ 328 (336)
T KOG2679|consen 260 SP------ESGIQFVTSGAGSKA-WRGTDHNPEVNPKELKFYYDGQGFMSVEI-SHSEARVVFYDV-SGK--VLHKWSTS 328 (336)
T ss_pred CC------CCCeeEEeeCCcccc-cCCCccCCccChhheEEeeCCCceEEEEE-ecceeEEEEEec-cCc--eEEEeecc
Confidence 21 356777777766532 1111111 123454555544558998987 456899999974 576 66665444
Q ss_pred Ec
Q 012895 424 SL 425 (454)
Q Consensus 424 ~~ 425 (454)
|+
T Consensus 329 kr 330 (336)
T KOG2679|consen 329 KR 330 (336)
T ss_pred cc
Confidence 33
No 10
>cd07402 MPP_GpdQ Enterobacter aerogenes GpdQ and related proteins, metallophosphatase domain. GpdQ (glycerophosphodiesterase Q, also known as Rv0805 in Mycobacterium tuberculosis) is a binuclear metallophosphoesterase from Enterobacter aerogenes that catalyzes the hydrolysis of mono-, di-, and triester substrates, including some organophosphate pesticides and products of the degradation of nerve agents. The GpdQ homolog, Rv0805, has 2',3'-cyclic nucleotide phosphodiesterase activity. GpdQ and Rv0805 belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosa
Probab=99.93 E-value=1.3e-24 Score=204.91 Aligned_cols=217 Identities=22% Similarity=0.279 Sum_probs=151.3
Q ss_pred EEEEEecCCCCCCh-------------HHHHHHhhcC--CCCeEeecCccccCCCChhhHHHHhhhhhhhhcCCCeeecC
Q 012895 149 EFAIVGDLGQTEWT-------------NSTLDHVGSK--DYDVFLLPGDLSYADFQQPLWDSFGRLVEPYASSRPWMVTE 213 (454)
Q Consensus 149 ~f~~igD~~~~~~~-------------~~~l~~i~~~--~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~~~P~~~v~ 213 (454)
||++++|+|.+... +++++.+++. +||+||++||+++... ...|+.+.+.++++ .+|+++++
T Consensus 1 r~~~iSDlH~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~~d~vi~~GDl~~~~~-~~~~~~~~~~l~~~--~~p~~~v~ 77 (240)
T cd07402 1 LLAQISDLHLRADGEGALLGVDTAASLEAVLAHINALHPRPDLVLVTGDLTDDGS-PESYERLRELLAAL--PIPVYLLP 77 (240)
T ss_pred CEEEEeCCccCCCCcceecCcCHHHHHHHHHHHHHhcCCCCCEEEECccCCCCCC-HHHHHHHHHHHhhc--CCCEEEeC
Confidence 69999999987531 3455666655 9999999999998654 34566666666665 58999999
Q ss_pred CCcccCCCCCCCcchhhhhhhhccCCCCCCCCCCCceEEEEeCeEEEEEecccCCC----CCCHHHHHHHHHHHHhhccC
Q 012895 214 GNHEIESIPIILPHAFKAYNARWLMPYEESGSSSNLYYSFDIAGAHIIMLGSYTDF----DEDSAQYKWLKADLAKINRK 289 (454)
Q Consensus 214 GNHD~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~Lds~~~~----~~~~~Q~~WL~~~L~~~~~~ 289 (454)
||||... .+ ...+..... .....+|+|+.++++||+||+.... ...++|++||++.|++..
T Consensus 78 GNHD~~~-------~~---~~~~~~~~~---~~~~~~~~~~~~~~~~i~lds~~~~~~~~~~~~~ql~wL~~~L~~~~-- 142 (240)
T cd07402 78 GNHDDRA-------AM---RAVFPELPP---APGFVQYVVDLGGWRLILLDSSVPGQHGGELCAAQLDWLEAALAEAP-- 142 (240)
T ss_pred CCCCCHH-------HH---HHhhccccc---cccccceeEecCCEEEEEEeCCCCCCcCCEECHHHHHHHHHHHHhCC--
Confidence 9999831 22 222211100 1235688999999999999986432 235899999999999874
Q ss_pred CCCeEEEEEccccccCCCCCC-CCcHHHHHHHHHHHHhc-CCcEEEecccccceeeecccCCCcCCCCcEEEEECCCCCC
Q 012895 290 KTPWIFVLLHAPWYNTNTAHQ-GEGESMRNSMEELLYNA-RVDVVFAGHVHAYERFTRIYDNKADPCGPIYITIGDGGNR 367 (454)
Q Consensus 290 ~~~w~Iv~~H~P~~~~~~~~~-~~~~~~~~~l~~ll~~~-~v~lvl~GH~H~y~r~~~~~~~~~~~~g~~yi~~G~gG~~ 367 (454)
.+++|+++|+|++....... ......++++.+++.++ +++++|+||+|...... .+|+.++++|+.|..
T Consensus 143 -~~~~il~~H~pp~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~~v~~GH~H~~~~~~--------~~g~~~~~~gs~~~~ 213 (240)
T cd07402 143 -DKPTLVFLHHPPFPVGIAWMDAIGLRNAEALAAVLARHPNVRAILCGHVHRPIDGS--------WGGIPLLTAPSTCHQ 213 (240)
T ss_pred -CCCEEEEECCCCccCCchhhhhhhCCCHHHHHHHHhcCCCeeEEEECCcCchHHeE--------ECCEEEEEcCcceee
Confidence 23589999999876543111 11112468899999999 89999999999965544 257888888887653
Q ss_pred CCcccccCCCCCCCceeeecccCEEEEEEecC
Q 012895 368 EGLALEFKEPKSPLSMFQESSFGHARLKILDE 399 (454)
Q Consensus 368 ~~~~~~~~~~~p~~~~~~~~~~G~~~l~v~~~ 399 (454)
+. +.+....+.+..+||..+.+.++
T Consensus 214 ------~~-~~~~~~~~~~~~~~~~~~~~~~~ 238 (240)
T cd07402 214 ------FA-PDLDDFALDALAPGYRALSLHED 238 (240)
T ss_pred ------ec-CCCCcccccccCCCCcEEEEecC
Confidence 32 22333444556779988887653
No 11
>cd07396 MPP_Nbla03831 Homo sapiens Nbla03831 and related proteins, metallophosphatase domain. Nbla03831 (also known as LOC56985) is an uncharacterized Homo sapiens protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=99.92 E-value=2.4e-24 Score=206.06 Aligned_cols=193 Identities=18% Similarity=0.238 Sum_probs=133.9
Q ss_pred eEEEEEecCCCCCCh--------------HHHHHHhhcCCCCeEeecCccccCCCCh--hhHHHHhhhhhhhhcCCCeee
Q 012895 148 IEFAIVGDLGQTEWT--------------NSTLDHVGSKDYDVFLLPGDLSYADFQQ--PLWDSFGRLVEPYASSRPWMV 211 (454)
Q Consensus 148 ~~f~~igD~~~~~~~--------------~~~l~~i~~~~pd~vl~~GDl~y~~~~~--~~~~~~~~~~~~l~~~~P~~~ 211 (454)
|||+++||+|..... .++++.+++.+||+||++||+++.+... ..|+.+.+.++.+ .+|+++
T Consensus 1 ~r~~~iSD~H~~~~~~~~~~~~~~~~~~l~~~i~~i~~~~~d~vv~~GDlv~~~~~~~~~~~~~~~~~l~~l--~~p~~~ 78 (267)
T cd07396 1 FRFGIIADIQYADEDDTRPRYYRNSLEKLEEAVEEWNRESLDFVVQLGDIIDGDNARAEEALDAVLAILDRL--KGPVHH 78 (267)
T ss_pred CeEEEEeccccccCCCcccchHHHhHHHHHHHHHHHHcCCCCEEEECCCeecCCCchHHHHHHHHHHHHHhc--CCCEEE
Confidence 699999999954321 2456677777899999999999765531 4455555555544 389999
Q ss_pred cCCCcccCCCCCCCcchhhhhhhhccCCCCCCCCCCCceEEEEeCeEEEEEecccCC-----------------------
Q 012895 212 TEGNHEIESIPIILPHAFKAYNARWLMPYEESGSSSNLYYSFDIAGAHIIMLGSYTD----------------------- 268 (454)
Q Consensus 212 v~GNHD~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~Lds~~~----------------------- 268 (454)
++||||...... . .+...+. ...+..||+|++++++||+||+...
T Consensus 79 v~GNHD~~~~~~----~--~~~~~~~------~~~~~~yysf~~~~~~~i~lds~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (267)
T cd07396 79 VLGNHDLYNPSR----E--YLLLYTL------LGLGAPYYSFSPGGIRFIVLDGYDISALGRPEDTPKAENADDNSNLGL 146 (267)
T ss_pred ecCccccccccH----h--hhhcccc------cCCCCceEEEecCCcEEEEEeCCccccccCCCCChhhhhHHHhchhhh
Confidence 999999953211 0 0100010 1123569999999999999998531
Q ss_pred -----------CCCCHHHHHHHHHHHHhhccCCCCeEEEEEccccccCCCCCCCCcHHHHHHHHHHHHhc-CCcEEEecc
Q 012895 269 -----------FDEDSAQYKWLKADLAKINRKKTPWIFVLLHAPWYNTNTAHQGEGESMRNSMEELLYNA-RVDVVFAGH 336 (454)
Q Consensus 269 -----------~~~~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~-~v~lvl~GH 336 (454)
.....+|++||+++|++... +..++||++|+|++..... .......++.+.+++.++ +|+++|+||
T Consensus 147 ~~~~~~~~~~~G~l~~~Ql~WL~~~L~~~~~-~~~~viV~~Hhp~~~~~~~-~~~~~~~~~~~~~ll~~~~~V~~v~~GH 224 (267)
T cd07396 147 YLSEPRFVDWNGGIGEEQLQWLRNELQEADA-NGEKVIIFSHFPLHPESTS-PHGLLWNHEEVLSILRAYGCVKACISGH 224 (267)
T ss_pred hccCccceeccCcCCHHHHHHHHHHHHHHHh-cCCeEEEEEeccCCCCCCC-ccccccCHHHHHHHHHhCCCEEEEEcCC
Confidence 12358999999999998754 2235899999998765431 111112357889999995 799999999
Q ss_pred cccceeeecccCCCcCCCCcEEEEECCC
Q 012895 337 VHAYERFTRIYDNKADPCGPIYITIGDG 364 (454)
Q Consensus 337 ~H~y~r~~~~~~~~~~~~g~~yi~~G~g 364 (454)
+|.++... .+|+.|+++|+-
T Consensus 225 ~H~~~~~~--------~~gi~~~~~~a~ 244 (267)
T cd07396 225 DHEGGYAQ--------RHGIHFLTLEGM 244 (267)
T ss_pred cCCCCccc--------cCCeeEEEechh
Confidence 99987543 258888887754
No 12
>PRK11148 cyclic 3',5'-adenosine monophosphate phosphodiesterase; Provisional
Probab=99.92 E-value=1.8e-23 Score=201.05 Aligned_cols=238 Identities=17% Similarity=0.215 Sum_probs=151.2
Q ss_pred EECCCC-CCCeEEEEEecCCCCCC-------------hHHHHHHhhc--CCCCeEeecCccccCCCChhhHHHHhhhhhh
Q 012895 139 FKMPPA-NFPIEFAIVGDLGQTEW-------------TNSTLDHVGS--KDYDVFLLPGDLSYADFQQPLWDSFGRLVEP 202 (454)
Q Consensus 139 F~T~p~-~~~~~f~~igD~~~~~~-------------~~~~l~~i~~--~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~ 202 (454)
.+|++. ..++||++++|+|.... .+++++.+++ .+|||||++||+++... ...|+.+.+.+++
T Consensus 5 ~~~~~~~~~~~~i~~iSD~Hl~~~~~~~~~~~~~~~~l~~~i~~i~~~~~~~D~vvitGDl~~~~~-~~~~~~~~~~l~~ 83 (275)
T PRK11148 5 LTLPLAGEARVRILQITDTHLFADEHETLLGVNTWESYQAVLEAIRAQQHEFDLIVATGDLAQDHS-SEAYQHFAEGIAP 83 (275)
T ss_pred cccccCCCCCEEEEEEcCcccCCCCCCceeccCHHHHHHHHHHHHHhhCCCCCEEEECCCCCCCCC-HHHHHHHHHHHhh
Confidence 456555 67899999999996321 1235566643 47999999999998543 3456666666665
Q ss_pred hhcCCCeeecCCCcccCCCCCCCcchhhhhhhhccCCCCCCCCCCCceEEEEeCeEEEEEecccCC----CCCCHHHHHH
Q 012895 203 YASSRPWMVTEGNHEIESIPIILPHAFKAYNARWLMPYEESGSSSNLYYSFDIAGAHIIMLGSYTD----FDEDSAQYKW 278 (454)
Q Consensus 203 l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~Lds~~~----~~~~~~Q~~W 278 (454)
+ ..|+++++||||... .+..+.....+. ..++.+..++++||+||+... ...+.+|++|
T Consensus 84 l--~~Pv~~v~GNHD~~~-------~~~~~~~~~~~~--------~~~~~~~~~~~~~i~Lds~~~g~~~G~l~~~ql~w 146 (275)
T PRK11148 84 L--RKPCVWLPGNHDFQP-------AMYSALQDAGIS--------PAKHVLIGEHWQILLLDSQVFGVPHGELSEYQLEW 146 (275)
T ss_pred c--CCcEEEeCCCCCChH-------HHHHHHhhcCCC--------ccceEEecCCEEEEEecCCCCCCcCCEeCHHHHHH
Confidence 5 389999999999831 222211111111 123334445699999998542 1235899999
Q ss_pred HHHHHHhhccCCCCeEEEEEccccccCCCCCCC-CcHHHHHHHHHHHHhc-CCcEEEecccccceeeecccCCCcCCCCc
Q 012895 279 LKADLAKINRKKTPWIFVLLHAPWYNTNTAHQG-EGESMRNSMEELLYNA-RVDVVFAGHVHAYERFTRIYDNKADPCGP 356 (454)
Q Consensus 279 L~~~L~~~~~~~~~w~Iv~~H~P~~~~~~~~~~-~~~~~~~~l~~ll~~~-~v~lvl~GH~H~y~r~~~~~~~~~~~~g~ 356 (454)
|+++|++... +..||++|||++.....+.. ......++|.++++++ +|+++|+||+|...... -+|+
T Consensus 147 L~~~L~~~~~---~~~vv~~hH~P~~~~~~~~d~~~l~n~~~l~~ll~~~~~v~~vl~GH~H~~~~~~--------~~gi 215 (275)
T PRK11148 147 LERKLADAPE---RHTLVLLHHHPLPAGCAWLDQHSLRNAHELAEVLAKFPNVKAILCGHIHQELDLD--------WNGR 215 (275)
T ss_pred HHHHHhhCCC---CCeEEEEcCCCCCCCcchhhccCCCCHHHHHHHHhcCCCceEEEecccChHHhce--------ECCE
Confidence 9999998743 23567777665544332211 1123457899999998 89999999999854332 2477
Q ss_pred EEEEECCCCCCCCcccccCCCCCCCceeeecccCEEEEEEecCCeEEEEEEEecCC
Q 012895 357 IYITIGDGGNREGLALEFKEPKSPLSMFQESSFGHARLKILDETRAHWSWYRNNDS 412 (454)
Q Consensus 357 ~yi~~G~gG~~~~~~~~~~~~~p~~~~~~~~~~G~~~l~v~~~~~~~~~~~~~~dg 412 (454)
.++++++.+.. +....+.+ .+.....||..+++.+++.+..+.++.+++
T Consensus 216 ~~~~~ps~~~q------~~~~~~~~-~~~~~~~g~~~~~l~~~g~~~~~~~~~~~~ 264 (275)
T PRK11148 216 RLLATPSTCVQ------FKPHCTNF-TLDTVAPGWRELELHADGSLETEVHRLADT 264 (275)
T ss_pred EEEEcCCCcCC------cCCCCCcc-ccccCCCcEEEEEEcCCCcEEEEEEEcCCC
Confidence 77766655432 22111221 122345699999987666677777766543
No 13
>cd07401 MPP_TMEM62_N Homo sapiens TMEM62, N-terminal metallophosphatase domain. TMEM62 (transmembrane protein 62) is an uncharacterized Homo sapiens transmembrane protein with an N-terminal metallophosphatase domain. TMEM62 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=99.88 E-value=6.9e-22 Score=187.61 Aligned_cols=185 Identities=16% Similarity=0.249 Sum_probs=123.6
Q ss_pred EEEEecCCCCCCh--------HHHHHHhhcCCCCeEeecCccccCCC--------ChhhHHHHhhhhhhhhc--CCCeee
Q 012895 150 FAIVGDLGQTEWT--------NSTLDHVGSKDYDVFLLPGDLSYADF--------QQPLWDSFGRLVEPYAS--SRPWMV 211 (454)
Q Consensus 150 f~~igD~~~~~~~--------~~~l~~i~~~~pd~vl~~GDl~y~~~--------~~~~~~~~~~~~~~l~~--~~P~~~ 211 (454)
|++++|+|.+... ..+++.+++.+||+||++||+++... ...+|+.|.+.+..... ..|++.
T Consensus 2 ~~~iSDlH~g~~~~~~~~~~~~~~~~~i~~~~pd~i~~~GD~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 81 (256)
T cd07401 2 FVHISDIHVSSFHPPNRAQDETFCSNFIDVIKPALVLATGDLTDNKTGNKLPSYQYQEEWQKYYNILKESSVINKEKWFD 81 (256)
T ss_pred EEEecccccCCcCchhhhhHHHHHHHHHHhhCCCEEEEccccccccccCCCcccccHHHHHHHHHHHHHhCCCCcceEEE
Confidence 7899999986542 12345667889999999999997442 24567777776654432 489999
Q ss_pred cCCCcccCCCCCCCcchhhhhhhhccCCCCCCCCCCCceEE--EEeCeEEEEEecccCC----------CCCCHHHHHHH
Q 012895 212 TEGNHEIESIPIILPHAFKAYNARWLMPYEESGSSSNLYYS--FDIAGAHIIMLGSYTD----------FDEDSAQYKWL 279 (454)
Q Consensus 212 v~GNHD~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ys--~~~g~v~fi~Lds~~~----------~~~~~~Q~~WL 279 (454)
++||||+...... ......|........ ....+|. +..++++||+|||... .....+|++||
T Consensus 82 v~GNHD~~~~~~~-~~~~~~~~~y~~~~~-----~~~~~~~~~~~~~~~~~I~Ldt~~~~~~~~~~~~~g~l~~~ql~wL 155 (256)
T cd07401 82 IRGNHDLFNIPSL-DSENNYYRKYSATGR-----DGSFSFSHTTRFGNYSFIGVDPTLFPGPKRPFNFFGSLDKKLLDRL 155 (256)
T ss_pred eCCCCCcCCCCCc-cchhhHHHHhheecC-----CCccceEEEecCCCEEEEEEcCccCCCCCCCCceeccCCHHHHHHH
Confidence 9999999543321 111122222111110 0122333 3358999999999632 12458999999
Q ss_pred HHHHHhhccCCCCeEEEEEccccccCCCCCCCCcHHHHHHHHHHHHhcCCcEEEecccccceeeecc
Q 012895 280 KADLAKINRKKTPWIFVLLHAPWYNTNTAHQGEGESMRNSMEELLYNARVDVVFAGHVHAYERFTRI 346 (454)
Q Consensus 280 ~~~L~~~~~~~~~w~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~y~r~~~~ 346 (454)
+++|++... .+++||++|+|+....... .. ....+.++|++++|+++||||+|.+++..|+
T Consensus 156 ~~~L~~~~~--~~~~IV~~HhP~~~~~~~~---~~-~~~~~~~ll~~~~v~~vl~GH~H~~~~~~p~ 216 (256)
T cd07401 156 EKELEKSTN--SNYTIWFGHYPTSTIISPS---AK-SSSKFKDLLKKYNVTAYLCGHLHPLGGLEPV 216 (256)
T ss_pred HHHHHhccc--CCeEEEEEcccchhccCCC---cc-hhHHHHHHHHhcCCcEEEeCCccCCCcceee
Confidence 999997643 3579999999986532211 11 2223999999999999999999999985654
No 14
>cd07399 MPP_YvnB Bacillus subtilis YvnB and related proteins, metallophosphatase domain. YvnB (BSU35040) is an uncharacterized Bacillus subtilis protein with a metallophosphatase domain. This family includes bacterial and eukaryotic proteins similar to YvnB. YvnB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for
Probab=99.86 E-value=6.3e-21 Score=176.22 Aligned_cols=149 Identities=18% Similarity=0.246 Sum_probs=111.9
Q ss_pred eEEEEEecCCCCCCh---------HHHHHHhhcCCCCeEeecCccccCCCChhhHHHHhhhhhhhh-cCCCeeecCCCcc
Q 012895 148 IEFAIVGDLGQTEWT---------NSTLDHVGSKDYDVFLLPGDLSYADFQQPLWDSFGRLVEPYA-SSRPWMVTEGNHE 217 (454)
Q Consensus 148 ~~f~~igD~~~~~~~---------~~~l~~i~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~l~-~~~P~~~v~GNHD 217 (454)
|||++++|+|..... ..+++.+.+.+||+||++||+++.+....+|+.+.+.++.+. ..+|+++++||||
T Consensus 1 f~~~~~~D~q~~~~~~~~~~~~~~~~i~~~~~~~~~d~iv~~GDl~~~~~~~~~~~~~~~~~~~l~~~~~p~~~~~GNHD 80 (214)
T cd07399 1 FTLAVLPDTQYYTESYPEVFDAQTDWIVDNAEALNIAFVLHLGDIVDDGDNDAEWEAADKAFARLDKAGIPYSVLAGNHD 80 (214)
T ss_pred CEEEEecCCCcCCcCCHHHHHHHHHHHHHHHHHcCCCEEEECCCccCCCCCHHHHHHHHHHHHHHHHcCCcEEEECCCCc
Confidence 689999999875431 223444556789999999999987665678998888888887 4599999999999
Q ss_pred cCCCCCCCcchhhhhhhhccCCCCCCCCCCCceEEEEeCeEEEEEecccCCCCCCHHHHHHHHHHHHhhccCCCCeEEEE
Q 012895 218 IESIPIILPHAFKAYNARWLMPYEESGSSSNLYYSFDIAGAHIIMLGSYTDFDEDSAQYKWLKADLAKINRKKTPWIFVL 297 (454)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~Lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~w~Iv~ 297 (454)
. ++.+|+. ...+|++||++.|++.+. +++||+
T Consensus 81 ~-----------------------------------------~~~ld~~----~~~~ql~WL~~~L~~~~~---~~~iv~ 112 (214)
T cd07399 81 L-----------------------------------------VLALEFG----PRDEVLQWANEVLKKHPD---RPAILT 112 (214)
T ss_pred c-----------------------------------------hhhCCCC----CCHHHHHHHHHHHHHCCC---CCEEEE
Confidence 3 1223321 248999999999998632 358999
Q ss_pred EccccccCCCCCCCC-----cHHHHHHHHHHHHhc-CCcEEEecccccceeee
Q 012895 298 LHAPWYNTNTAHQGE-----GESMRNSMEELLYNA-RVDVVFAGHVHAYERFT 344 (454)
Q Consensus 298 ~H~P~~~~~~~~~~~-----~~~~~~~l~~ll~~~-~v~lvl~GH~H~y~r~~ 344 (454)
+|+|++......... ....++.|.++++++ +|+++||||+|.+.+..
T Consensus 113 ~H~p~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~V~~v~~GH~H~~~~~~ 165 (214)
T cd07399 113 THAYLNCDDSRPDSIDYDSDVNDGQQIWDKLVKKNDNVFMVLSGHVHGAGRTT 165 (214)
T ss_pred ecccccCCCCcCcccccccccccHHHHHHHHHhCCCCEEEEEccccCCCceEE
Confidence 999998654322111 123456788999999 79999999999987765
No 15
>cd00842 MPP_ASMase acid sphingomyelinase and related proteins, metallophosphatase domain. Acid sphingomyelinase (ASMase) is a ubiquitously expressed phosphodiesterase which hydrolyzes sphingomyelin in acid pH conditions to form ceramide, a bioactive second messenger, as part of the sphingomyelin signaling pathway. ASMase is localized at the noncytosolic leaflet of biomembranes (for example the luminal leaflet of endosomes, lysosomes and phagosomes, and the extracellular leaflet of plasma membranes). ASMase-deficient humans develop Niemann-Pick disease. This disease is characterized by lysosomal storage of sphingomyelin in all tissues. Although ASMase-deficient mice are resistant to stress-induced apoptosis, they have greater susceptibility to bacterial infection. The latter correlates with defective phagolysosomal fusion and antibacterial killing activity in ASMase-deficient macrophages. ASMase belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but
Probab=99.81 E-value=4e-19 Score=172.84 Aligned_cols=188 Identities=20% Similarity=0.299 Sum_probs=124.5
Q ss_pred EEecCCCCCC---hHHHHHHhhcC--CCCeEeecCccccCCCChhh--------HHHHhhhhhhhhcCCCeeecCCCccc
Q 012895 152 IVGDLGQTEW---TNSTLDHVGSK--DYDVFLLPGDLSYADFQQPL--------WDSFGRLVEPYASSRPWMVTEGNHEI 218 (454)
Q Consensus 152 ~igD~~~~~~---~~~~l~~i~~~--~pd~vl~~GDl~y~~~~~~~--------~~~~~~~~~~l~~~~P~~~v~GNHD~ 218 (454)
-+|+.+.... .+.+++.+++. +|||||++||+++.+..... +..+.+.++.....+|+++++||||.
T Consensus 42 ~~G~~~CD~p~~l~~s~l~~i~~~~~~~dfii~tGD~v~h~~~~~~~~~~~~~~~~~~~~~l~~~~~~~pv~~~~GNHD~ 121 (296)
T cd00842 42 PWGDYGCDSPWRLVESALEAIKKNHPKPDFILWTGDLVRHDVDEQTPETLVLISISNLTSLLKKAFPDTPVYPALGNHDS 121 (296)
T ss_pred CCcCcCCCCcHHHHHHHHHHHHHhCCCCCEEEEcCCCCCCCchhhchhHHHHHHHHHHHHHHHHhCCCCCEEEcCCCCCC
Confidence 3455543332 24567777665 99999999999987755221 33444555555567999999999999
Q ss_pred CCCCCCC-----cchhhhhhhhcc--CCCCCC-CCCCCceEEEE-eCeEEEEEecccCCC-----------CCCHHHHHH
Q 012895 219 ESIPIIL-----PHAFKAYNARWL--MPYEES-GSSSNLYYSFD-IAGAHIIMLGSYTDF-----------DEDSAQYKW 278 (454)
Q Consensus 219 ~~~~~~~-----~~~~~~~~~~~~--~p~~~~-~~~~~~~ys~~-~g~v~fi~Lds~~~~-----------~~~~~Q~~W 278 (454)
....... ...+..+.+.|. ++.+.. ....+.||++. .++++||+|||.... .....|++|
T Consensus 122 ~p~~~~~~~~~~~~~~~~~~~~w~~~l~~~~~~~~~~ggYY~~~~~~~l~vI~Lnt~~~~~~~~~~~~~~~~~~~~Ql~W 201 (296)
T cd00842 122 YPVNQFPPNNSPSWLYDALAELWKSWLPEEAEETFKKGGYYSVPVKPGLRVISLNTNLYYKKNFWLLGSNETDPAGQLQW 201 (296)
T ss_pred CcccccCCcccccHHHHHHHHHHHhhcCHHHHHHhhcceEEEEEcCCCeEEEEEeCccccccChhhhccCCCCHHHHHHH
Confidence 6533221 111222333332 222111 11246789988 788999999985321 224789999
Q ss_pred HHHHHHhhccCCCCeEEEEEccccccCCCCCCCCcHHHHHHHHHHHHhcC--CcEEEecccccceee
Q 012895 279 LKADLAKINRKKTPWIFVLLHAPWYNTNTAHQGEGESMRNSMEELLYNAR--VDVVFAGHVHAYERF 343 (454)
Q Consensus 279 L~~~L~~~~~~~~~w~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~--v~lvl~GH~H~y~r~ 343 (454)
|+++|++++.++. .++|++|+|+....... .....++|.+++++|+ |.++|+||+|..+..
T Consensus 202 L~~~L~~a~~~~~-~v~I~~HiPp~~~~~~~---~~~~~~~~~~ii~~y~~~i~~~~~GH~H~d~~~ 264 (296)
T cd00842 202 LEDELQEAEQAGE-KVWIIGHIPPGVNSYDT---LENWSERYLQIINRYSDTIAGQFFGHTHRDEFR 264 (296)
T ss_pred HHHHHHHHHHCCC-eEEEEeccCCCCccccc---chHHHHHHHHHHHHHHHhhheeeecccccceEE
Confidence 9999999865333 48899999987653321 1346789999999997 778999999996544
No 16
>cd08163 MPP_Cdc1 Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain. Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. Cdc1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site
Probab=99.79 E-value=1.4e-18 Score=164.21 Aligned_cols=169 Identities=18% Similarity=0.241 Sum_probs=111.8
Q ss_pred HHHHHhh-cCCCCeEeecCccccCCCC--hhhHH----HHhhhhhhhhcCCCeeecCCCcccCCCCCCCcchhhhhhhhc
Q 012895 164 STLDHVG-SKDYDVFLLPGDLSYADFQ--QPLWD----SFGRLVEPYASSRPWMVTEGNHEIESIPIILPHAFKAYNARW 236 (454)
Q Consensus 164 ~~l~~i~-~~~pd~vl~~GDl~y~~~~--~~~~~----~~~~~~~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~ 236 (454)
+.++.+. ..+||+||++||+++.+.. ..+|. .|.+.+.++....|++.++||||+.............|.+.|
T Consensus 35 ~~~~~~~~~l~PD~vv~lGDL~d~G~~~~~~~~~~~~~rf~~i~~~~~~~~pv~~VpGNHDig~~~~~~~~~~~rf~~~F 114 (257)
T cd08163 35 RNWRYMQKQLKPDSTIFLGDLFDGGRDWADEYWKKEYNRFMRIFDPSPGRKMVESLPGNHDIGFGNGVVLPVRQRFEKYF 114 (257)
T ss_pred HHHHHHHHhcCCCEEEEecccccCCeeCcHHHHHHHHHHHHHHhcCCCccceEEEeCCCcccCCCCCCCHHHHHHHHHHh
Confidence 3444443 4689999999999986543 23443 333333333224799999999998644332222445666666
Q ss_pred cCCCCCCCCCCCceEEEEeCeEEEEEecccCC-----CCCCHHHHHHHHHHHHhhccCCCCeEEEEEccccccCCCCCCC
Q 012895 237 LMPYEESGSSSNLYYSFDIAGAHIIMLGSYTD-----FDEDSAQYKWLKADLAKINRKKTPWIFVLLHAPWYNTNTAHQG 311 (454)
Q Consensus 237 ~~p~~~~~~~~~~~ys~~~g~v~fi~Lds~~~-----~~~~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~~~~~~~ 311 (454)
. ..++.+++++++||+||+... ......|.+||++.|+.... ..+ +||++|+|+|......++
T Consensus 115 g----------~~~~~~~~~~~~fV~Lds~~l~~~~~~~~~~~~~~~l~~~l~~~~~-~~p-~ILl~H~Plyr~~~~~cg 182 (257)
T cd08163 115 G----------PTSRVIDVGNHTFVILDTISLSNKDDPDVYQPPREFLHSFSAMKVK-SKP-RILLTHVPLYRPPNTSCG 182 (257)
T ss_pred C----------CCceEEEECCEEEEEEccccccCCcccccchhHHHHHHhhhhccCC-CCc-EEEEeccccccCCCCCCC
Confidence 4 236889999999999999532 12346799999999887543 333 899999999875432211
Q ss_pred ---C---------cHH-----HHHHHHHHHHhcCCcEEEecccccceeee
Q 012895 312 ---E---------GES-----MRNSMEELLYNARVDVVFAGHVHAYERFT 344 (454)
Q Consensus 312 ---~---------~~~-----~~~~l~~ll~~~~v~lvl~GH~H~y~r~~ 344 (454)
+ +.. -.+.-..+|++.++.+||+||+|.|=...
T Consensus 183 ~~re~~~~~~~~~g~~yq~~l~~~~s~~il~~~~P~~vfsGhdH~~C~~~ 232 (257)
T cd08163 183 PLRESKTPLPYGYGYQYQNLLEPSLSEVILKAVQPVIAFSGDDHDYCEVV 232 (257)
T ss_pred CccccCCCCCCCCCccceeecCHHHHHHHHHhhCCcEEEecCCCccceeE
Confidence 0 000 12444577888899999999999975543
No 17
>PF00149 Metallophos: Calcineurin-like phosphoesterase; InterPro: IPR004843 This domain is found in a diverse range of phosphoesterases [], including protein phosphoserine phosphatases, nucleotidases, sphingomyelin phosphodiesterases and 2'-3' cAMP phosphodiesterases, as well as nucleases such as bacterial SbcD or yeast MRE11. The most conserved regions in this domain centre around the metal chelating residues.; GO: 0016787 hydrolase activity; PDB: 2IAE_C 3DW8_F 3FGA_C 2IE4_C 2NYM_C 2NYL_C 3K7V_C 2NPP_C 2IE3_C 3K7W_C ....
Probab=99.76 E-value=1e-18 Score=154.69 Aligned_cols=189 Identities=21% Similarity=0.207 Sum_probs=102.1
Q ss_pred eEEEEEecCCCCCChH-----HHHHHhhcCCCCeEeecCccccCCCChhhHHHHh-hhhhhhhcCCCeeecCCCcccCCC
Q 012895 148 IEFAIVGDLGQTEWTN-----STLDHVGSKDYDVFLLPGDLSYADFQQPLWDSFG-RLVEPYASSRPWMVTEGNHEIESI 221 (454)
Q Consensus 148 ~~f~~igD~~~~~~~~-----~~l~~i~~~~pd~vl~~GDl~y~~~~~~~~~~~~-~~~~~l~~~~P~~~v~GNHD~~~~ 221 (454)
|||+++||+|...... .........++|+||++||+++.+.....+.... ..........|+++++||||+...
T Consensus 1 ~ri~~isD~H~~~~~~~~~~~~~~~~~~~~~~d~ii~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GNHD~~~~ 80 (200)
T PF00149_consen 1 MRILVISDLHGGYDDDSDAFRKLDEIAAENKPDFIIFLGDLVDGGNPSEEWRAQFWFFIRLLNPKIPVYFILGNHDYYSG 80 (200)
T ss_dssp EEEEEEEBBTTTHHHHCHHHHHHHHHHHHTTTSEEEEESTSSSSSSHHHHHHHHHHHHHHHHHTTTTEEEEE-TTSSHHH
T ss_pred CeEEEEcCCCCCCcchhHHHHHHHHHhccCCCCEEEeeccccccccccccchhhhccchhhhhcccccccccccccccee
Confidence 7999999999876543 2333445889999999999999877644433322 122334456999999999999532
Q ss_pred CCCCcchhhhhhhhccC---CCCCCCCCCCceEEEEeCeEEEEEecccCCCCCCHHHHHHHHHHHHhhccCCCCeEEEEE
Q 012895 222 PIILPHAFKAYNARWLM---PYEESGSSSNLYYSFDIAGAHIIMLGSYTDFDEDSAQYKWLKADLAKINRKKTPWIFVLL 298 (454)
Q Consensus 222 ~~~~~~~~~~~~~~~~~---p~~~~~~~~~~~ys~~~g~v~fi~Lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~w~Iv~~ 298 (454)
.. ........... ....................................+..|+............+++||++
T Consensus 81 ~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~ 156 (200)
T PF00149_consen 81 NS----FYGFYDYQFEDYYGNYNYYYSYFNNKVIFDNDNFWFNSGNNEYPDYGMEAQQEWWLWLLLLLEAKNDDPVIVFT 156 (200)
T ss_dssp HH----HHHHHHHHHSSEEECSSEEECTESSEEEEEETTEEEEEHCCHTHHSEHHHHHHHHHHHHHHHHEEEESEEEEEE
T ss_pred cc----ccccccccccccccccccccccCcceeeecccccccccccccccccccccchhcccccccccccccccceeEEE
Confidence 11 00001111100 000000000000111111122222221111111223333333322222222456899999
Q ss_pred ccccccCCCCCCC--CcHHHHHHHHHHHHhcCCcEEEecccccc
Q 012895 299 HAPWYNTNTAHQG--EGESMRNSMEELLYNARVDVVFAGHVHAY 340 (454)
Q Consensus 299 H~P~~~~~~~~~~--~~~~~~~~l~~ll~~~~v~lvl~GH~H~y 340 (454)
|+|++........ .....++.+..++.+++|+++|+||+|.|
T Consensus 157 H~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~GH~H~~ 200 (200)
T PF00149_consen 157 HHPPYSSSSDSSSYGNESKGREALEELLKKYNVDLVLSGHTHRY 200 (200)
T ss_dssp SSSSSTTSSSTHHHSSEEEHHHHHHHHHHHTTCSEEEEESSSSE
T ss_pred ecCCCCccccccccchhhccHHHHHHHHhhCCCCEEEeCceecC
Confidence 9999876543211 11246788999999999999999999986
No 18
>cd07393 MPP_DR1119 Deinococcus radiodurans DR1119 and related proteins, metallophosphatase domain. DR1119 is an uncharacterized Deinococcus radiodurans protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordinat
Probab=99.73 E-value=1e-16 Score=150.10 Aligned_cols=191 Identities=16% Similarity=0.170 Sum_probs=116.9
Q ss_pred EEEEecCCCCC--------Ch---HHHHHHhhcC------CCCeEeecCccccCCCChhhHHHHhhhhhhhhcCCCeeec
Q 012895 150 FAIVGDLGQTE--------WT---NSTLDHVGSK------DYDVFLLPGDLSYADFQQPLWDSFGRLVEPYASSRPWMVT 212 (454)
Q Consensus 150 f~~igD~~~~~--------~~---~~~l~~i~~~------~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~~~P~~~v 212 (454)
+.+++|+|... .. .+.++.+.+. +||+||++||+++.... .......+.++.+ ..|++++
T Consensus 1 ~~~~sDlHl~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~D~viiaGDl~~~~~~-~~~~~~l~~l~~l--~~~v~~V 77 (232)
T cd07393 1 IFAIADLHLNLDPTKPMDVFGPEWKNHTEKIKENWDNVVAPEDIVLIPGDISWAMKL-EEAKLDLAWIDAL--PGTKVLL 77 (232)
T ss_pred CeEEEeeccCCCCCCCCcccCccHHHHHHHHHHHHHhcCCCCCEEEEcCCCccCCCh-HHHHHHHHHHHhC--CCCeEEE
Confidence 35789999762 22 3445554433 99999999999854332 2222222333333 2578999
Q ss_pred CCCcccCCCCCCCcchhhhhhhhccCCCCCCCCCCCceEEEEeCeEEEEEecccC----CC-------------CCCHHH
Q 012895 213 EGNHEIESIPIILPHAFKAYNARWLMPYEESGSSSNLYYSFDIAGAHIIMLGSYT----DF-------------DEDSAQ 275 (454)
Q Consensus 213 ~GNHD~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~Lds~~----~~-------------~~~~~Q 275 (454)
+||||+... ....+.+.+.-. +..-.....+.++++.|++++... .+ .....|
T Consensus 78 ~GNHD~~~~------~~~~~~~~l~~~----~~~~~~n~~~~~~~i~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (232)
T cd07393 78 KGNHDYWWG------SASKLRKALEES----RLALLFNNAYIDDDVAICGTRGWDNPGNPWPPINETLKVEEDEKIFERE 147 (232)
T ss_pred eCCccccCC------CHHHHHHHHHhc----CeEEeccCcEEECCEEEEEEEeeCCCCCccccccccccchhHHHHHHHH
Confidence 999998321 122222222100 000001234556788898876311 11 012568
Q ss_pred HHHHHHHHHhhccCC-CCeEEEEEccccccCCCCCCCCcHHHHHHHHHHHHhcCCcEEEecccccceeeecccCCCcCCC
Q 012895 276 YKWLKADLAKINRKK-TPWIFVLLHAPWYNTNTAHQGEGESMRNSMEELLYNARVDVVFAGHVHAYERFTRIYDNKADPC 354 (454)
Q Consensus 276 ~~WL~~~L~~~~~~~-~~w~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~y~r~~~~~~~~~~~~ 354 (454)
+.||++.|++..... ..++|+++|+|++.... ..+.+.+++++++++++|+||+|.+++..|+.. .-+
T Consensus 148 l~~l~~~L~~~~~~~~~~~~i~~~H~p~~~~~~--------~~~~~~~~~~~~~v~~vl~GH~H~~~~~~~~~~---~~~ 216 (232)
T cd07393 148 LERLELSLKAAKKREKEKIKIVMLHYPPANENG--------DDSPISKLIEEYGVDICVYGHLHGVGRDRAING---ERG 216 (232)
T ss_pred HHHHHHHHHHHHhCCCCCCEEEEECCCCcCCCC--------CHHHHHHHHHHcCCCEEEECCCCCCcccccccc---eEC
Confidence 999999999875422 24689999999876432 124678888999999999999999888765531 125
Q ss_pred CcEEEEECCC
Q 012895 355 GPIYITIGDG 364 (454)
Q Consensus 355 g~~yi~~G~g 364 (454)
|+.|.++.++
T Consensus 217 gi~~~~~~~~ 226 (232)
T cd07393 217 GIRYQLVSAD 226 (232)
T ss_pred CEEEEEEcch
Confidence 7778777665
No 19
>cd07383 MPP_Dcr2 Saccharomyces cerevisiae DCR2 phosphatase and related proteins, metallophosphatase domain. DCR2 phosphatase (Dosage-dependent Cell Cycle Regulator 2) functions together with DCR1 (Gid8) in a common pathway to accelerate initiation of DNA replication in Saccharomyces cerevisiae. Genetic analysis suggests that DCR1 functions upstream of DCR2. DCR2 interacts with and dephosphorylates Sic1, an inhibitor of mitotic cyclin/cyclin-dependent kinase complexes, which may serve to trigger the initiation of cell division. DCR2 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAP
Probab=99.73 E-value=9.7e-17 Score=146.87 Aligned_cols=150 Identities=21% Similarity=0.284 Sum_probs=100.7
Q ss_pred CCeEEEEEecCCCCCCh------------HHHHHH-hhcCCCCeEeecCccccCCCChh-hHHHHhhhhhhhhc-CCCee
Q 012895 146 FPIEFAIVGDLGQTEWT------------NSTLDH-VGSKDYDVFLLPGDLSYADFQQP-LWDSFGRLVEPYAS-SRPWM 210 (454)
Q Consensus 146 ~~~~f~~igD~~~~~~~------------~~~l~~-i~~~~pd~vl~~GDl~y~~~~~~-~~~~~~~~~~~l~~-~~P~~ 210 (454)
+.+||++++|+|..... .+.++. ++..+||+||++||+++...... .+..+.++++.+.. .+|++
T Consensus 1 ~~~ki~~isDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~GDl~~~~~~~~~~~~~~~~~~~~l~~~~~p~~ 80 (199)
T cd07383 1 GKFKILQFADLHFGEGEGTCEGCEADLKTVAFIERVLDAEKPDLVVLTGDLITGENTNDNSTSALDKAVSPMIDRKIPWA 80 (199)
T ss_pred CceEEEEEeeecccCCCCCCCcchhhHHHHHHHHHHHhhcCCCEEEECCccccCCCCchHHHHHHHHHHHHHHHcCCCEE
Confidence 36899999999985432 122332 34679999999999998766532 35556666666544 49999
Q ss_pred ecCCCcccCCCCCCCcchhhhhhhhccCCCCCCCCCCCceEEEEeCeEEEEEecccCCCCCCHHHHHHHHHHHHhhc--c
Q 012895 211 VTEGNHEIESIPIILPHAFKAYNARWLMPYEESGSSSNLYYSFDIAGAHIIMLGSYTDFDEDSAQYKWLKADLAKIN--R 288 (454)
Q Consensus 211 ~v~GNHD~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~Lds~~~~~~~~~Q~~WL~~~L~~~~--~ 288 (454)
+++||||.. -.....|++||+++|++.. +
T Consensus 81 ~~~GNHD~~-------------------------------------------------g~l~~~ql~wL~~~l~~~~~~~ 111 (199)
T cd07383 81 ATFGNHDGY-------------------------------------------------DWIRPSQIEWFKETSAALKKKY 111 (199)
T ss_pred EECccCCCC-------------------------------------------------CCCCHHHHHHHHHHHHHHhhcc
Confidence 999999910 0123789999999999873 1
Q ss_pred CCCCeEEEEEccccccCCCCCC---------CC---cHHHHHHH-HHHHHhcCCcEEEecccccceeee
Q 012895 289 KKTPWIFVLLHAPWYNTNTAHQ---------GE---GESMRNSM-EELLYNARVDVVFAGHVHAYERFT 344 (454)
Q Consensus 289 ~~~~w~Iv~~H~P~~~~~~~~~---------~~---~~~~~~~l-~~ll~~~~v~lvl~GH~H~y~r~~ 344 (454)
....+.++++|+|+......+. .+ .......+ ..+.+..+|+++|+||+|.++...
T Consensus 112 ~~~~~~l~f~H~P~~~~~~~~~~~~~~~g~~~d~~~~~~~~~~~~~~~~~~~~v~~v~~GH~H~~~~~~ 180 (199)
T cd07383 112 GKPIPSLAFFHIPLPEYREVWEGKGKVPGINNEKVCCPKINSGLFKALLERGDVKGVFCGHDHGNDFCG 180 (199)
T ss_pred CCCCcceEEEecChHHHHhhhcccCCCCccCCcccCCCcCCcHHHHHHHHcCCeEEEEeCCCCCcceec
Confidence 1234689999999865432111 11 01122334 444466789999999999976544
No 20
>cd07392 MPP_PAE1087 Pyrobaculum aerophilum PAE1087 and related proteins, metallophosphatase domain. PAE1087 is an uncharacterized Pyrobaculum aerophilum protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordina
Probab=99.72 E-value=1.1e-16 Score=144.84 Aligned_cols=167 Identities=13% Similarity=0.156 Sum_probs=104.0
Q ss_pred EEEEecCCCCCChHHHHHHhhcCCCCeEeecCccccCCCChhhHHHHhhhhhhhhcCCCeeecCCCcccCCCCCCCcchh
Q 012895 150 FAIVGDLGQTEWTNSTLDHVGSKDYDVFLLPGDLSYADFQQPLWDSFGRLVEPYASSRPWMVTEGNHEIESIPIILPHAF 229 (454)
Q Consensus 150 f~~igD~~~~~~~~~~l~~i~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~~~~~~~ 229 (454)
++++||+|........ ..+++.++|+||++||+++.... ..+..+ +.++.+ ..|+++++||||... ..
T Consensus 1 i~~~sD~H~~~~~~~~-~~~~~~~~D~vv~~GDl~~~~~~-~~~~~~-~~l~~~--~~p~~~v~GNHD~~~-------~~ 68 (188)
T cd07392 1 ILAISDIHGDVEKLEA-IILKAEEADAVIVAGDITNFGGK-EAAVEI-NLLLAI--GVPVLAVPGNCDTPE-------IL 68 (188)
T ss_pred CEEEEecCCCHHHHHH-HHhhccCCCEEEECCCccCcCCH-HHHHHH-HHHHhc--CCCEEEEcCCCCCHH-------HH
Confidence 5789999976432222 34567899999999999975543 222222 333322 489999999999731 11
Q ss_pred hhhhhhccCCCCCCCCCCCceEEEEeCeEEEEEecccCC------CCCCHHHHHHHHHHHHhhccCCCCeEEEEEccccc
Q 012895 230 KAYNARWLMPYEESGSSSNLYYSFDIAGAHIIMLGSYTD------FDEDSAQYKWLKADLAKINRKKTPWIFVLLHAPWY 303 (454)
Q Consensus 230 ~~~~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~Lds~~~------~~~~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~ 303 (454)
.......... ....+.+++++|+++++... ....++|++|+ +.|... ..+.+|+++|+|++
T Consensus 69 ~~~~~~~~~~---------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~-~~l~~~---~~~~~ilv~H~pp~ 135 (188)
T cd07392 69 GLLTSAGLNL---------HGKVVEVGGYTFVGIGGSNPTPFNTPIELSEEEIVSD-GRLNNL---LAKNLILVTHAPPY 135 (188)
T ss_pred HhhhcCcEec---------CCCEEEECCEEEEEeCCCCCCCCCCccccCHHHHHHh-hhhhcc---CCCCeEEEECCCCc
Confidence 1110000000 11235578899999987421 12357889998 444433 22348999999997
Q ss_pred cCCC-CCCCCcHHHHHHHHHHHHhcCCcEEEecccccce
Q 012895 304 NTNT-AHQGEGESMRNSMEELLYNARVDVVFAGHVHAYE 341 (454)
Q Consensus 304 ~~~~-~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~y~ 341 (454)
.... ..........+.+.+++++++++++||||+|...
T Consensus 136 ~~~~d~~~~~~~~g~~~l~~li~~~~~~~~l~GH~H~~~ 174 (188)
T cd07392 136 GTAVDRVSGGFHVGSKAIRKFIEERQPLLCICGHIHESR 174 (188)
T ss_pred CCcccccCCCCccCCHHHHHHHHHhCCcEEEEecccccc
Confidence 6311 1111101234788899999999999999999853
No 21
>TIGR03767 P_acnes_RR metallophosphoesterase, PPA1498 family. This model describes a small collection of probable metallophosphoresterases, related to pfam00149 but with long inserts separating some of the shared motifs such that the homology is apparent only through multiple sequence alignment. Members of this protein family, in general, have a Sec-independent TAT (twin-arginine translocation) signal sequence, N-terminal to the region modeled by this alignment. Members include YP_056203.1 from Propionibacterium acnes KPA171202.
Probab=99.71 E-value=3.1e-16 Score=155.95 Aligned_cols=94 Identities=21% Similarity=0.344 Sum_probs=72.1
Q ss_pred CCceEEEE-eCeEEEEEecccCC-----CCCCHHHHHHHHHHHHhhccCCCCeEEEEEccccccCCCCCC-----CCcHH
Q 012895 247 SNLYYSFD-IAGAHIIMLGSYTD-----FDEDSAQYKWLKADLAKINRKKTPWIFVLLHAPWYNTNTAHQ-----GEGES 315 (454)
Q Consensus 247 ~~~~ys~~-~g~v~fi~Lds~~~-----~~~~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~~~~~~-----~~~~~ 315 (454)
+..||+|+ .++++||+|||... -...++|++||+++|++. +.+++||++|||++....... +....
T Consensus 290 G~~YYSFd~~ggvrfIvLDSt~~~G~~~G~L~eeQL~WLeqeLa~a---~~k~VVVf~HHPp~s~g~~~~Dp~~pg~~~~ 366 (496)
T TIGR03767 290 GTGYYTFDIAGGVRGISMDTTNRAGGDEGSLGQTQFKWIKDTLRAS---SDTLFVLFSHHTSWSMVNELTDPVDPGEKRH 366 (496)
T ss_pred CCceEEEEeECCEEEEEEeCCCcCCCcCCccCHHHHHHHHHHHhcC---CCCCEEEEECCCCcccccccccccccccccc
Confidence 46799999 89999999999642 124699999999999976 335699999999886543221 11122
Q ss_pred HHHHHHHHHHhc-CCcEEEecccccceee
Q 012895 316 MRNSMEELLYNA-RVDVVFAGHVHAYERF 343 (454)
Q Consensus 316 ~~~~l~~ll~~~-~v~lvl~GH~H~y~r~ 343 (454)
..++|.++|+++ +|.++||||+|.....
T Consensus 367 n~~eLldLL~~ypnV~aVfsGHvH~n~i~ 395 (496)
T TIGR03767 367 LGTELVSLLLEHPNVLAWVNGHTHSNKIT 395 (496)
T ss_pred CHHHHHHHHhcCCCceEEEECCcCCCccc
Confidence 357899999998 7999999999986544
No 22
>TIGR03729 acc_ester putative phosphoesterase. Members of this protein family belong to the larger family pfam00149 (calcineurin-like phosphoesterase), a family largely defined by small motifs of metal-chelating residues. The subfamily in this model shows a good but imperfect co-occurrence in species with domain TIGR03715 that defines a novel class of signal peptide typical of the accessory secretory system.
Probab=99.70 E-value=3.5e-16 Score=147.33 Aligned_cols=176 Identities=15% Similarity=0.118 Sum_probs=107.4
Q ss_pred EEEEEecCCCCCCh-------HHHHHHhhcCCCCeEeecCccccCCCChhhHHHHhhhhhhhhcCCCeeecCCCcccCCC
Q 012895 149 EFAIVGDLGQTEWT-------NSTLDHVGSKDYDVFLLPGDLSYADFQQPLWDSFGRLVEPYASSRPWMVTEGNHEIESI 221 (454)
Q Consensus 149 ~f~~igD~~~~~~~-------~~~l~~i~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~ 221 (454)
||++++|+|..... ..+++.+.+.++|+||++||++... .....+.+.+..+ ...|+++++||||+...
T Consensus 1 ki~~iSDlH~~~~~~~~~~~l~~~~~~~~~~~~d~vv~~GDl~~~~---~~~~~~~~~l~~~-~~~pv~~v~GNHD~~~~ 76 (239)
T TIGR03729 1 KIAFSSDLHIDLNHFDTEEMLETLAQYLKKQKIDHLHIAGDISNDF---QRSLPFIEKLQEL-KGIKVTFNAGNHDMLKD 76 (239)
T ss_pred CEEEEEeecCCCCCCCHHHHHHHHHHHHHhcCCCEEEECCccccch---hhHHHHHHHHHHh-cCCcEEEECCCCCCCCC
Confidence 68999999964221 2355666678899999999999642 1122233333322 34899999999998422
Q ss_pred CCCCcchhhhhhhhccCCCCCCCCCCCceEEEEeCeEEEEEecccCCC--------------------------C-----
Q 012895 222 PIILPHAFKAYNARWLMPYEESGSSSNLYYSFDIAGAHIIMLGSYTDF--------------------------D----- 270 (454)
Q Consensus 222 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~Lds~~~~--------------------------~----- 270 (454)
. .+..+.+.+. +. .-.+.++.+..++++|++++...++ .
T Consensus 77 ~-----~~~~~~~~~~-~~----~l~~~~~~~~~~~~~~ig~~gw~d~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 146 (239)
T TIGR03729 77 L-----TYEEIESNDS-PL----YLHNRFIDIPNTQWRIIGNNGWYDYSFSNDKTSKEILRWKKSFWFDRRIKRPMSDPE 146 (239)
T ss_pred C-----CHHHHHhccc-hh----hhcccccccCCCceEEEeeccceecccccccCHHHHHHhhhcEEeecccCCCCChHH
Confidence 1 1111221110 00 0012233344467888888842211 0
Q ss_pred CCHHHHHHHHHHHHhhccCCCCeEEEEEccccccCCC-------CCCCC-cHHHHHHHHHHHHhcCCcEEEecccccce
Q 012895 271 EDSAQYKWLKADLAKINRKKTPWIFVLLHAPWYNTNT-------AHQGE-GESMRNSMEELLYNARVDVVFAGHVHAYE 341 (454)
Q Consensus 271 ~~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~~~-------~~~~~-~~~~~~~l~~ll~~~~v~lvl~GH~H~y~ 341 (454)
....|++||++.|++... ..+|+++|+|+..... .+... .....+.|.+++++++++++|+||+|.-.
T Consensus 147 ~~~~~l~~l~~~l~~~~~---~~~ivvtH~pP~~~~~~~~~~~~~~~~~~~~~~s~~l~~li~~~~v~~~i~GH~H~~~ 222 (239)
T TIGR03729 147 RTAIVLKQLKKQLNQLDN---KQVIFVTHFVPHRDFIYVPMDHRRFDMFNAFLGSQHFGQLLVKYEIKDVIFGHLHRRF 222 (239)
T ss_pred HHHHHHHHHHHHHHhcCC---CCEEEEEcccchHHHhcCCCCCcchhhhhhccChHHHHHHHHHhCCCEEEECCccCCC
Confidence 126788999999987743 2389999999854211 11110 01124789999999999999999999854
No 23
>COG1409 Icc Predicted phosphohydrolases [General function prediction only]
Probab=99.67 E-value=1.3e-15 Score=148.00 Aligned_cols=179 Identities=20% Similarity=0.294 Sum_probs=119.2
Q ss_pred eEEEEEecCCCC--CC-h----HHHHHHhhcCCCCeEeecCccccCCCChhhHHHHhhhhhhhhcCCCeeecCCCcccCC
Q 012895 148 IEFAIVGDLGQT--EW-T----NSTLDHVGSKDYDVFLLPGDLSYADFQQPLWDSFGRLVEPYASSRPWMVTEGNHEIES 220 (454)
Q Consensus 148 ~~f~~igD~~~~--~~-~----~~~l~~i~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~ 220 (454)
+||++|+|.|.. .. . ..+++.++..+||+||++||+++. +....++...++++......|++++|||||...
T Consensus 1 ~~i~~isD~H~~~~~~~~~~~~~~~~~~i~~~~~D~~v~tGDl~~~-~~~~~~~~~~~~l~~~~~~~~~~~vpGNHD~~~ 79 (301)
T COG1409 1 MRIAHISDLHLGALGVDSEELLEALLAAIEQLKPDLLVVTGDLTND-GEPEEYRRLKELLARLELPAPVIVVPGNHDARV 79 (301)
T ss_pred CeEEEEecCcccccccchHHHHHHHHHHHhcCCCCEEEEccCcCCC-CCHHHHHHHHHHHhhccCCCceEeeCCCCcCCc
Confidence 589999999987 22 2 245567778899999999999987 445566666677774444589999999999853
Q ss_pred CCCCCcchhhhhhhhccCCCCCCCCCCCceEEEEe-CeEEEEEecccCC----CCCCHHHHHHHHHHHHhhccCCCCeEE
Q 012895 221 IPIILPHAFKAYNARWLMPYEESGSSSNLYYSFDI-AGAHIIMLGSYTD----FDEDSAQYKWLKADLAKINRKKTPWIF 295 (454)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~-g~v~fi~Lds~~~----~~~~~~Q~~WL~~~L~~~~~~~~~w~I 295 (454)
. ....+...+.... ..+..... ++++++.+|+... ...+..|++||++.|++........+|
T Consensus 80 ~------~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~d~~~~~~~~G~~~~~q~~~l~~~l~~~~~~~~~~~v 146 (301)
T COG1409 80 V------NGEAFSDQFFNRY-------AVLVGACSSGGWRVIGLDSSVPGVPLGRLGAEQLDWLEEALAAAPERAKDTVV 146 (301)
T ss_pred h------HHHHhhhhhcccC-------cceEeeccCCceEEEEecCCCCCCCCCEECHHHHHHHHHHHHhCccccCceEE
Confidence 2 2223332222111 11111122 5689999998643 235699999999999987553112356
Q ss_pred EEEccccccCCCCCCCCcHHHHHHHHHHHHhcC--CcEEEecccccc
Q 012895 296 VLLHAPWYNTNTAHQGEGESMRNSMEELLYNAR--VDVVFAGHVHAY 340 (454)
Q Consensus 296 v~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~--v~lvl~GH~H~y 340 (454)
+++|+|+.................+..++..++ ++++|+||.|..
T Consensus 147 ~~~hh~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~vl~GH~H~~ 193 (301)
T COG1409 147 VLHHHPLPSPGTGVDRVALRDAGELLDVLIAHGNDVRLVLSGHIHLA 193 (301)
T ss_pred EecCCCCCCCCCccceeeeecchhHHHHHHhcCCceEEEEeCccccc
Confidence 676777655443322222233456777778888 999999999975
No 24
>cd07385 MPP_YkuE_C Bacillus subtilis YkuE and related proteins, C-terminal metallophosphatase domain. YkuE is an uncharacterized Bacillus subtilis protein with a C-terminal metallophosphatase domain and an N-terminal twin-arginine (RR) motif. An RR-signal peptide derived from the Bacillus subtilis YkuE protein can direct Tat-dependent secretion of agarase in Streptomyces lividans. This is an indication that YkuE is transported by the Bacillus subtilis Tat (Twin-arginine translocation) pathway machinery. YkuE belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-dia
Probab=99.64 E-value=4.3e-15 Score=138.41 Aligned_cols=185 Identities=17% Similarity=0.140 Sum_probs=112.6
Q ss_pred CeEEEEEecCCCCCCh-----HHHHHHhhcCCCCeEeecCccccCCCChhhHHHHhhhhhhhhcCCCeeecCCCcccCCC
Q 012895 147 PIEFAIVGDLGQTEWT-----NSTLDHVGSKDYDVFLLPGDLSYADFQQPLWDSFGRLVEPYASSRPWMVTEGNHEIESI 221 (454)
Q Consensus 147 ~~~f~~igD~~~~~~~-----~~~l~~i~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~ 221 (454)
++||++++|+|..... +++++.+.+.+||+||++||+++...... +.+.+.++.+....|+++++||||+...
T Consensus 1 ~~~i~~~sDlH~~~~~~~~~~~~~~~~~~~~~~d~vl~~GD~~~~~~~~~--~~~~~~l~~l~~~~~v~~v~GNHD~~~~ 78 (223)
T cd07385 1 GLRIAHLSDLHLGPFVSRERLERLVEKINALKPDLVVLTGDLVDGSVDVL--ELLLELLKKLKAPLGVYAVLGNHDYYSG 78 (223)
T ss_pred CCEEEEEeecCCCccCCHHHHHHHHHHHhccCCCEEEEcCcccCCcchhh--HHHHHHHhccCCCCCEEEECCCcccccC
Confidence 4899999999986542 45666777889999999999998665432 3445556666556899999999999643
Q ss_pred CCCCcchhhhhhhhccCCCCCCCCCCCceEEEEeCeEEE--EEecccCCCCCCHHHHHHHHHHHHhhccCCCCeEEEEEc
Q 012895 222 PIILPHAFKAYNARWLMPYEESGSSSNLYYSFDIAGAHI--IMLGSYTDFDEDSAQYKWLKADLAKINRKKTPWIFVLLH 299 (454)
Q Consensus 222 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~v~f--i~Lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H 299 (454)
.. ..+....+...+.. -.+....++.++..+ +.++.. ....+++.+.+++.+. .++.|++.|
T Consensus 79 ~~---~~~~~~l~~~~v~~-----L~~~~~~~~~~~~~i~i~G~~~~------~~~~~~~~~~~~~~~~--~~~~I~l~H 142 (223)
T cd07385 79 DE---ENWIEALESAGITV-----LRNESVEISVGGATIGIAGVDDG------LGRRPDLEKALKGLDE--DDPNILLAH 142 (223)
T ss_pred ch---HHHHHHHHHcCCEE-----eecCcEEeccCCeEEEEEeccCc------cccCCCHHHHHhCCCC--CCCEEEEec
Confidence 22 01011111111111 012344555555443 333211 2223456666665433 346899999
Q ss_pred cccccCCCCCCCCcHHHHHHHHHHHHhcCCcEEEecccccceeeecccCCC--------------cCCCCcEEEEECCCC
Q 012895 300 APWYNTNTAHQGEGESMRNSMEELLYNARVDVVFAGHVHAYERFTRIYDNK--------------ADPCGPIYITIGDGG 365 (454)
Q Consensus 300 ~P~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~y~r~~~~~~~~--------------~~~~g~~yi~~G~gG 365 (454)
.|.+. .. +.+.++|++++||+|..|...+..... ...+..+||+.|.|.
T Consensus 143 ~P~~~----------------~~-~~~~~~dl~l~GHtHggqi~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~Vs~G~G~ 205 (223)
T cd07385 143 QPDTA----------------EE-AAAWGVDLQLSGHTHGGQIRLPGIGPLVLSKLARPYDYGLYRKGGSQLYVSRGLGT 205 (223)
T ss_pred CCChh----------------HH-hcccCccEEEeccCCCCEEeccccccccchhhcCcccceEEEECCEEEEEcCCccC
Confidence 98431 11 156789999999999988766543220 112346677777765
Q ss_pred C
Q 012895 366 N 366 (454)
Q Consensus 366 ~ 366 (454)
.
T Consensus 206 ~ 206 (223)
T cd07385 206 W 206 (223)
T ss_pred C
Confidence 4
No 25
>cd07388 MPP_Tt1561 Thermus thermophilus Tt1561 and related proteins, metallophosphatase domain. This family includes bacterial proteins related to Tt1561 (also known as Aq1956 in Aquifex aeolicus), an uncharacterized Thermus thermophilus protein. The conserved domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets,
Probab=99.62 E-value=1.8e-14 Score=132.70 Aligned_cols=173 Identities=11% Similarity=0.073 Sum_probs=105.2
Q ss_pred CCeEEEEEecCCCCCCh-HHHHHHhhcCCCCeEeecCccccCCCChhhHHHHhhhhhhhhc-CCCeeecCCCcccCCCCC
Q 012895 146 FPIEFAIVGDLGQTEWT-NSTLDHVGSKDYDVFLLPGDLSYADFQQPLWDSFGRLVEPYAS-SRPWMVTEGNHEIESIPI 223 (454)
Q Consensus 146 ~~~~f~~igD~~~~~~~-~~~l~~i~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~-~~P~~~v~GNHD~~~~~~ 223 (454)
.+.|++++||+|.+... +++++.+++.++|+||++||+++.+.....+. ++++.+.. ..|+++++||||..
T Consensus 3 ~~~kIl~iSDiHgn~~~le~l~~~~~~~~~D~vv~~GDl~~~g~~~~~~~---~~l~~l~~l~~pv~~V~GNhD~~---- 75 (224)
T cd07388 3 TVRYVLATSNPKGDLEALEKLVGLAPETGADAIVLIGNLLPKAAKSEDYA---AFFRILGEAHLPTFYVPGPQDAP---- 75 (224)
T ss_pred ceeEEEEEEecCCCHHHHHHHHHHHhhcCCCEEEECCCCCCCCCCHHHHH---HHHHHHHhcCCceEEEcCCCChH----
Confidence 45789999999965322 34455555679999999999998653223333 33444433 27999999999972
Q ss_pred CCcchhhhhhhhcc----CCCCCCCCCCCceEEEEe-CeEEEEEecccCCC--CCCHHHH----HHHHH-HHHhhccCCC
Q 012895 224 ILPHAFKAYNARWL----MPYEESGSSSNLYYSFDI-AGAHIIMLGSYTDF--DEDSAQY----KWLKA-DLAKINRKKT 291 (454)
Q Consensus 224 ~~~~~~~~~~~~~~----~p~~~~~~~~~~~ys~~~-g~v~fi~Lds~~~~--~~~~~Q~----~WL~~-~L~~~~~~~~ 291 (454)
-.....+.|. .|.... - ... ...+ |+++|++|+..... ...++|. +||.+ .|+.......
T Consensus 76 ----v~~~l~~~~~~~~~~p~~~~-l-h~~--~~~~~g~~~~~GlGGs~~~~~e~sE~e~~~~~~~~~~~~l~~~~~~~~ 147 (224)
T cd07388 76 ----LWEYLREAYNAELVHPEIRN-V-HET--FAFWRGPYLVAGVGGEIADEGEPEEHEALRYPAWVAEYRLKALWELKD 147 (224)
T ss_pred ----HHHHHHHHhcccccCcccee-c-CCC--eEEecCCeEEEEecCCcCCCCCcCHHHHhhhhhhHHHHHHHHHHhCCC
Confidence 0111111221 121000 0 111 2334 55999999854332 2345542 56544 2222211122
Q ss_pred CeEEEEEccccccCCCCCCCCcHHHHHHHHHHHHhcCCcEEEecccc
Q 012895 292 PWIFVLLHAPWYNTNTAHQGEGESMRNSMEELLYNARVDVVFAGHVH 338 (454)
Q Consensus 292 ~w~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H 338 (454)
+..|+++|+||+..+..| .....+.++++++++.+++|||+|
T Consensus 148 ~~~VLv~H~PP~g~g~~h-----~GS~alr~~I~~~~P~l~i~GHih 189 (224)
T cd07388 148 YRKVFLFHTPPYHKGLNE-----QGSHEVAHLIKTHNPLVVLVGGKG 189 (224)
T ss_pred CCeEEEECCCCCCCCCCc-----cCHHHHHHHHHHhCCCEEEEcCCc
Confidence 348999999999874323 235788899999999999999999
No 26
>cd07400 MPP_YydB Bacillus subtilis YydB and related proteins, metallophosphatase domain. YydB (BSU40220) is an uncharacterized Bacillus subtilis protein that belongs to the following Bacillus subtilis gene cluster yydB-yydC-yydD-yydG-yydH-yydI-yydJ. YydB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productiv
Probab=99.61 E-value=9.7e-15 Score=126.43 Aligned_cols=131 Identities=22% Similarity=0.296 Sum_probs=94.1
Q ss_pred EEEEecCCCCCChH-----------HHHHHhhcCCCCeEeecCccccCCCChhhHHHHhhhhhhhhcC-CCeeecCCCcc
Q 012895 150 FAIVGDLGQTEWTN-----------STLDHVGSKDYDVFLLPGDLSYADFQQPLWDSFGRLVEPYASS-RPWMVTEGNHE 217 (454)
Q Consensus 150 f~~igD~~~~~~~~-----------~~l~~i~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~~-~P~~~v~GNHD 217 (454)
|++++|+|.+.... .+++.+...++|+|+++||+++... ...|+.+.++++++... .|++.++||||
T Consensus 1 il~isD~Hl~~~~~~~~~~~~~~l~~~~~~~~~~~~d~vi~~GDl~~~~~-~~~~~~~~~~~~~l~~~~~~~~~v~GNHD 79 (144)
T cd07400 1 ILHLSDLHFGPERKPELLALLSLLDRLLAEIKALDPDLVVITGDLTQRGL-PEEFEEAREFLDALPAPLEPVLVVPGNHD 79 (144)
T ss_pred CeEeCccCCCCCcchhHHHHHHHHHHHHHHHhccCCCEEEECCCCCCCCC-HHHHHHHHHHHHHccccCCcEEEeCCCCe
Confidence 57899999865421 1345556789999999999998654 45677777778877654 69999999999
Q ss_pred cCCCCCCCcchhhhhhhhccCCCCCCCCCCCceEEEEeCeEEEEEecccCCCCCCHHHHHHHHHHHHhhccCCCCeEEEE
Q 012895 218 IESIPIILPHAFKAYNARWLMPYEESGSSSNLYYSFDIAGAHIIMLGSYTDFDEDSAQYKWLKADLAKINRKKTPWIFVL 297 (454)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~Lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~w~Iv~ 297 (454)
. |++
T Consensus 80 ~----------------------------------------------------------------------------iv~ 83 (144)
T cd07400 80 V----------------------------------------------------------------------------IVV 83 (144)
T ss_pred E----------------------------------------------------------------------------EEE
Confidence 5 899
Q ss_pred EccccccCCCCCCCCcHHHHHHHHHHHHhcCCcEEEecccccceeeecccCCCcCCCCcEEEEEC
Q 012895 298 LHAPWYNTNTAHQGEGESMRNSMEELLYNARVDVVFAGHVHAYERFTRIYDNKADPCGPIYITIG 362 (454)
Q Consensus 298 ~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~y~r~~~~~~~~~~~~g~~yi~~G 362 (454)
+|+|++.......... ..++.+.+++.+++++++++||+|......-. ...+++.++.+|
T Consensus 84 ~Hhp~~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~l~GH~H~~~~~~~~----~~~~~~~~~~aG 143 (144)
T cd07400 84 LHHPLVPPPGSGRERL-LDAGDALKLLAEAGVDLVLHGHKHVPYVGNIS----NAGGGLVVIGAG 143 (144)
T ss_pred ecCCCCCCCccccccC-CCHHHHHHHHHHcCCCEEEECCCCCcCeeecc----CCCCCEEEEecC
Confidence 9999977644221111 14578999999999999999999996544311 113455666555
No 27
>PRK11340 phosphodiesterase YaeI; Provisional
Probab=99.60 E-value=5e-14 Score=134.92 Aligned_cols=168 Identities=17% Similarity=0.180 Sum_probs=100.4
Q ss_pred CCCCeEEEEEecCCCCCC-----hHHHHHHhhcCCCCeEeecCccccCCCChhhHHHHhhhhhhhhcCCCeeecCCCccc
Q 012895 144 ANFPIEFAIVGDLGQTEW-----TNSTLDHVGSKDYDVFLLPGDLSYADFQQPLWDSFGRLVEPYASSRPWMVTEGNHEI 218 (454)
Q Consensus 144 ~~~~~~f~~igD~~~~~~-----~~~~l~~i~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~ 218 (454)
...++|+++++|+|.... ..++++.+++.+||+|+++||+++.+.. ..++.+.+.++.+.+..|+|+++||||+
T Consensus 46 ~~~~~rI~~lSDlH~~~~~~~~~l~~~v~~i~~~~pDlVli~GD~~d~~~~-~~~~~~~~~L~~L~~~~pv~~V~GNHD~ 124 (271)
T PRK11340 46 NAAPFKILFLADLHYSRFVPLSLISDAIALGIEQKPDLILLGGDYVLFDMP-LNFSAFSDVLSPLAECAPTFACFGNHDR 124 (271)
T ss_pred CCCCcEEEEEcccCCCCcCCHHHHHHHHHHHHhcCCCEEEEccCcCCCCcc-ccHHHHHHHHHHHhhcCCEEEecCCCCc
Confidence 356799999999998632 2345566678899999999999973322 2345566777777766899999999998
Q ss_pred CCCCCCCcchhhhhhhhccCCCCCCCCCCCceEEEEeCe--EEEEEecccCCCCCCHHHHHHHHHHHHhhccCCCCeEEE
Q 012895 219 ESIPIILPHAFKAYNARWLMPYEESGSSSNLYYSFDIAG--AHIIMLGSYTDFDEDSAQYKWLKADLAKINRKKTPWIFV 296 (454)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~--v~fi~Lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~w~Iv 296 (454)
...... ...+....+...+.. -.+....+..++ +.++++|.... +... ..+.+++ . ..+|+
T Consensus 125 ~~~~~~-~~~~~~~l~~~gi~l-----L~n~~~~i~~~~~~i~i~G~~d~~~---~~~~---~~~~~~~----~-~~~Il 187 (271)
T PRK11340 125 PVGTEK-NHLIGETLKSAGITV-----LFNQATVIATPNRQFELVGTGDLWA---GQCK---PPPASEA----N-LPRLV 187 (271)
T ss_pred ccCccc-hHHHHHHHHhcCcEE-----eeCCeEEEeeCCcEEEEEEecchhc---cCCC---hhHhcCC----C-CCeEE
Confidence 432110 001111111111110 013344455443 66777763211 1101 1111211 2 24899
Q ss_pred EEccccccCCCCCCCCcHHHHHHHHHHHHhcCCcEEEecccccceeeecc
Q 012895 297 LLHAPWYNTNTAHQGEGESMRNSMEELLYNARVDVVFAGHVHAYERFTRI 346 (454)
Q Consensus 297 ~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~y~r~~~~ 346 (454)
+.|.|-+- +.+.+.++|++||||+|.-|...|.
T Consensus 188 L~H~P~~~-----------------~~~~~~~~dL~lsGHTHGGQi~lP~ 220 (271)
T PRK11340 188 LAHNPDSK-----------------EVMRDEPWDLMLCGHTHGGQLRVPL 220 (271)
T ss_pred EEcCCChh-----------------HhhccCCCCEEEeccccCCeEEccc
Confidence 99999421 1235578999999999998876553
No 28
>cd07404 MPP_MS158 Microscilla MS158 and related proteins, metallophosphatase domain. MS158 is an uncharacterized Microscilla protein with a metallophosphatase domain. Microscilla proteins MS152, and MS153 are also included in this family. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is t
Probab=99.57 E-value=1.4e-14 Score=128.67 Aligned_cols=144 Identities=21% Similarity=0.248 Sum_probs=89.2
Q ss_pred EEEEecCCCCCChHHH-H-HHhhcCCCCeEeecCccccCCCChhhHHHHhhhhhhhhcCCCeeecCCCcccCCCCCCCcc
Q 012895 150 FAIVGDLGQTEWTNST-L-DHVGSKDYDVFLLPGDLSYADFQQPLWDSFGRLVEPYASSRPWMVTEGNHEIESIPIILPH 227 (454)
Q Consensus 150 f~~igD~~~~~~~~~~-l-~~i~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~~~~~ 227 (454)
|+++||+|.+...... + +.+...++|+++++||+++..... .+.. .........|+++++||||+.
T Consensus 1 ~~~iSDlH~~~~~~~~~~~~~~~~~~~d~li~~GDi~~~~~~~-~~~~---~~~~~~~~~~v~~v~GNHD~~-------- 68 (166)
T cd07404 1 IQYLSDLHLEFEDNLADLLNFPIAPDADILVLAGDIGYLTDAP-RFAP---LLLALKGFEPVIYVPGNHEFY-------- 68 (166)
T ss_pred CceEccccccCccccccccccCCCCCCCEEEECCCCCCCcchH-HHHH---HHHhhcCCccEEEeCCCcceE--------
Confidence 5789999987543322 2 334577999999999999754332 2221 222333458999999999982
Q ss_pred hhhhhhhhccCCCCCCCCCCCceEEEEeCeEEEEEecccCCCCC-CHHHHHHHHHHHHhhccCCCCeEEEEEccccccCC
Q 012895 228 AFKAYNARWLMPYEESGSSSNLYYSFDIAGAHIIMLGSYTDFDE-DSAQYKWLKADLAKINRKKTPWIFVLLHAPWYNTN 306 (454)
Q Consensus 228 ~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~Lds~~~~~~-~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~~ 306 (454)
+.|++..-..++.. ..++.+|+.+++. +.+||++|+|++...
T Consensus 69 ------------------------------~~~~G~~~w~~~~~~~~~~~~~~~~d~~-------~~~vv~~HhpP~~~~ 111 (166)
T cd07404 69 ------------------------------VRIIGTTLWSDISLFGEAAARMRMNDFR-------GKTVVVTHHAPSPLS 111 (166)
T ss_pred ------------------------------EEEEeeecccccCccchHHHHhCCCCCC-------CCEEEEeCCCCCccc
Confidence 22222221112211 2344555555444 238999999998764
Q ss_pred CCCC---C-CcHHHHHHHHHHHHhcCCcEEEeccccccee
Q 012895 307 TAHQ---G-EGESMRNSMEELLYNARVDVVFAGHVHAYER 342 (454)
Q Consensus 307 ~~~~---~-~~~~~~~~l~~ll~~~~v~lvl~GH~H~y~r 342 (454)
.... . .....++.+.+++++.+|++++|||+|....
T Consensus 112 ~~~~~~~~~~~~~~~~~l~~~~~~~~v~~~i~GH~H~~~~ 151 (166)
T cd07404 112 LAPQYGDSLVNAAFAVDLDDLILADPIDLWIHGHTHFNFD 151 (166)
T ss_pred cCccccCCCcchhhhhccHhHHhhcCCCEEEECCccccce
Confidence 3221 1 1123456677888889999999999998643
No 29
>KOG1432 consensus Predicted DNA repair exonuclease SIA1 [General function prediction only]
Probab=99.54 E-value=2e-12 Score=121.58 Aligned_cols=262 Identities=21% Similarity=0.279 Sum_probs=142.0
Q ss_pred eeEEECCCCCCCeEEEEEecCCCCCC--------------------hHHHHHHh-hcCCCCeEeecCccccCCCChhhHH
Q 012895 136 EFSFKMPPANFPIEFAIVGDLGQTEW--------------------TNSTLDHV-GSKDYDVFLLPGDLSYADFQQPLWD 194 (454)
Q Consensus 136 ~~~F~T~p~~~~~~f~~igD~~~~~~--------------------~~~~l~~i-~~~~pd~vl~~GDl~y~~~~~~~~~ 194 (454)
.++|+. .++||++.++|+|.+.. ..+.++++ +.++||||+++||+++....+..-.
T Consensus 45 ~lr~~~---~g~fKIlqvaDlH~g~g~~~~c~d~~p~~~~~csD~nTt~F~~rvL~sE~PDlVVfTGD~i~g~~t~Da~~ 121 (379)
T KOG1432|consen 45 KLRFRE---DGTFKILQVADLHFGFGRETRCRDVLPSEEACCSDLNTTNFVSRVLASEKPDLVVFTGDNIFGHSTQDAAT 121 (379)
T ss_pred eeeecC---CCceEEEEeeccccccCCCccccccCcchhhhhcCccHHHHHHHHHhccCCCEEEEeCCcccccccHhHHH
Confidence 455554 78899999999987643 11234443 5899999999999999755443333
Q ss_pred HHhhhhhhhh-cCCCeeecCCCcccCCCCCCCcchhhhhhhhccCCCCCC--CCCCCceE-EEEeCe-------------
Q 012895 195 SFGRLVEPYA-SSRPWMVTEGNHEIESIPIILPHAFKAYNARWLMPYEES--GSSSNLYY-SFDIAG------------- 257 (454)
Q Consensus 195 ~~~~~~~~l~-~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~p~~~~--~~~~~~~y-s~~~g~------------- 257 (454)
.+.+.+.+.- .++||.+++||||-..... ...+..+.. .+|..-+ .+....-| -..+|+
T Consensus 122 sl~kAvaP~I~~~IPwA~~lGNHDdes~lt--r~ql~~~i~--~lP~s~~~v~p~dg~~~~~~g~gnyn~~i~~~~ds~~ 197 (379)
T KOG1432|consen 122 SLMKAVAPAIDRKIPWAAVLGNHDDESDLT--RLQLMKFIS--KLPYSLSQVNPPDGHMYIIDGFGNYNLQIEGAIDSEL 197 (379)
T ss_pred HHHHHhhhHhhcCCCeEEEecccccccccC--HHHHHHHHh--cCCCccccCCCcccceeeeecccceEEEeccCCCccc
Confidence 4555666644 4599999999999865432 111222211 1222110 00011111 111111
Q ss_pred -----EEEEEecccCC---------CC-CCHHHHHHHHHHHHhh---ccCCCC-eEEEEEccccc--cCCCC---C---C
Q 012895 258 -----AHIIMLGSYTD---------FD-EDSAQYKWLKADLAKI---NRKKTP-WIFVLLHAPWY--NTNTA---H---Q 310 (454)
Q Consensus 258 -----v~fi~Lds~~~---------~~-~~~~Q~~WL~~~L~~~---~~~~~~-w~Iv~~H~P~~--~~~~~---~---~ 310 (454)
..+++||+... |+ ..+.|..||+..-.+- +.+-.| --+++.|.|+- ..-.. . .
T Consensus 198 ~~~sv~~lyfld~~~~~s~~~~~~~Ydwik~sq~~wl~~~~~~~~~~~~~~~P~p~La~~HIP~~E~~~~~~~tp~~g~~ 277 (379)
T KOG1432|consen 198 ENKSVFNLYFLDSSSYTSVPPLLPGYDWIKESQLEWLSDTSKEFKEPNSKYNPQPGLAFFHIPLPEFLELESKTPLIGVF 277 (379)
T ss_pred ccCceeeEEEEecCCcccccccccCccchhhhhHHHHhhhhhhhhcccCccCCCCceEEEEcccHHHhhccCCCccccee
Confidence 34556665321 11 2578999999877331 111112 36899999962 21111 0 0
Q ss_pred CCc---HHHHHHHHHHHH-hcCCcEEEecccccceeeecccCCCcCCCCcEEEEECCCCCCCCcccccCCCCCCCceeee
Q 012895 311 GEG---ESMRNSMEELLY-NARVDVVFAGHVHAYERFTRIYDNKADPCGPIYITIGDGGNREGLALEFKEPKSPLSMFQE 386 (454)
Q Consensus 311 ~~~---~~~~~~l~~ll~-~~~v~lvl~GH~H~y~r~~~~~~~~~~~~g~~yi~~G~gG~~~~~~~~~~~~~p~~~~~~~ 386 (454)
.++ ......+...|. .-+|++|+|||+|...--.+. ++.++++=|+|+...| +. .+.|. |
T Consensus 278 ~E~~~~~~~~sg~~~~L~~r~~Vk~vf~GHdHvNDfC~~~-------k~~~wlCygGgaGygg----Yg--~~gw~--R- 341 (379)
T KOG1432|consen 278 QEGVSASKHNSGFLTTLVNRGNVKGVFCGHDHVNDFCGEL-------KGELWLCYGGGAGYGG----YG--IGGWE--R- 341 (379)
T ss_pred eccccccccccHHHHHHHhccCcceEEeccccccceeccc-------CCeEEEEecCCCccCC----cC--cCCcc--c-
Confidence 011 122345556665 778999999999997655543 3547777665543322 11 12221 1
Q ss_pred cccCEEEEEEecCCeEEEEEEEecCCCceeeeEEEEE
Q 012895 387 SSFGHARLKILDETRAHWSWYRNNDSDAVIADEVRLE 423 (454)
Q Consensus 387 ~~~G~~~l~v~~~~~~~~~~~~~~dg~~~~~D~~~i~ 423 (454)
+-..+++.....-.-+|+|.+|+.-.++|.-.+-
T Consensus 342 ---r~Rv~e~d~~~~~IkTWKRl~d~~~~~~D~q~l~ 375 (379)
T KOG1432|consen 342 ---RARVFELDLNKDRIKTWKRLDDKPLSVIDYQLLY 375 (379)
T ss_pred ---ceEEEEccccccccceeeecCCCCcceeeeEEEe
Confidence 1123444222222346899988765566765443
No 30
>cd00840 MPP_Mre11_N Mre11 nuclease, N-terminal metallophosphatase domain. Mre11 (also known as SbcD in Escherichia coli) is a subunit of the MRX protein complex. This complex includes: Mre11, Rad50, and Xrs2/Nbs1, and plays a vital role in several nuclear processes including DNA double-strand break repair, telomere length maintenance, cell cycle checkpoint control, and meiotic recombination, in eukaryotes. During double-strand break repair, the MRX complex is required to hold the two ends of a broken chromosome together. In vitro studies show that Mre11 has 3'-5' exonuclease activity on dsDNA templates and endonuclease activity on dsDNA and ssDNA templates. In addition to the N-terminal phosphatase domain, the eukaryotic MRE11 members of this family have a C-terminal DNA binding domain (not included in this alignment model). MRE11-like proteins are found in prokaryotes and archaea was well as in eukaryotes. Mre11 belongs to the metallophosphatase (MPP) superfamily. MPPs are functi
Probab=99.54 E-value=7.2e-14 Score=129.98 Aligned_cols=186 Identities=16% Similarity=0.103 Sum_probs=106.1
Q ss_pred EEEEEecCCCCCCh----------------HHHHHHhhcCCCCeEeecCccccCCCC-hhhHHHHhhhhhhhh-cCCCee
Q 012895 149 EFAIVGDLGQTEWT----------------NSTLDHVGSKDYDVFLLPGDLSYADFQ-QPLWDSFGRLVEPYA-SSRPWM 210 (454)
Q Consensus 149 ~f~~igD~~~~~~~----------------~~~l~~i~~~~pd~vl~~GDl~y~~~~-~~~~~~~~~~~~~l~-~~~P~~ 210 (454)
||++++|+|.+... .++++.+.+.+||+||++||+++.... ...+..+.+.++.+. ..+|++
T Consensus 1 ~i~~~sD~Hlg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 80 (223)
T cd00840 1 RFLHTADWHLGKPLKGLSRDRRREDQFEAFEEIVELAIEEKVDFVLIAGDLFDSNNPSPEALELLIEALRRLKEAGIPVF 80 (223)
T ss_pred CeEEeccccCCccccCcCcccchHHHHHHHHHHHHHHHhcCCCEEEECCcccCCCCCCHHHHHHHHHHHHHHHHCCCCEE
Confidence 68999999986431 234455567899999999999986543 334556666666665 358999
Q ss_pred ecCCCcccCCCCCCCcchhhhhhhhccCCCCCCCCCCCceEEEEeCeEEEEEecccCCCCCCHHHHHHHHHHHHhhccCC
Q 012895 211 VTEGNHEIESIPIILPHAFKAYNARWLMPYEESGSSSNLYYSFDIAGAHIIMLGSYTDFDEDSAQYKWLKADLAKINRKK 290 (454)
Q Consensus 211 ~v~GNHD~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~Lds~~~~~~~~~Q~~WL~~~L~~~~~~~ 290 (454)
+++||||....... ......+.. +................++..++.|++++..... ....+.++++..+.... .
T Consensus 81 ~~~GNHD~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~v~i~g~~~~~~~-~~~~~~~~~~~~~~~~~--~ 155 (223)
T cd00840 81 IIAGNHDSPSRLGA-LSPLLALSG-LHLVGVEEDVLTPLLLPKGGTGVAIYGLPYLRRS-RLRDLLADAELRPRPLD--P 155 (223)
T ss_pred EecCCCCCcccccc-ccchHhhCc-EEEEcccCcceeEEEeccCCeEEEEEECCCCCHH-HHHHHHHHHHHHhhccC--C
Confidence 99999999643221 000111110 0000000000011222334556888888753221 11233444444444433 2
Q ss_pred CCeEEEEEccccccCCCCCCCCcHHHHHHHHHHHHhcCCcEEEecccccceee
Q 012895 291 TPWIFVLLHAPWYNTNTAHQGEGESMRNSMEELLYNARVDVVFAGHVHAYERF 343 (454)
Q Consensus 291 ~~w~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~y~r~ 343 (454)
....|+++|.|+.......... .......+...++|++++||.|..+..
T Consensus 156 ~~~~Il~~H~~~~~~~~~~~~~----~~~~~~~~~~~~~d~v~~GH~H~~~~~ 204 (223)
T cd00840 156 DDFNILLLHGGVAGAGPSDSER----APFVPEALLPAGFDYVALGHIHRPQII 204 (223)
T ss_pred CCcEEEEEeeeeecCCCCcccc----cccCcHhhcCcCCCEEECCCcccCeee
Confidence 3458999999976543321110 123344456788999999999986543
No 31
>TIGR03768 RPA4764 metallophosphoesterase, RPA4764 family. This model describes a small collection of probable metallophosphoresterases, related to pfam00149. Members of this protein family usually have a Sec-independent TAT (twin-arginine translocation) signal sequence, N-terminal to the region modeled by this alignment. This model and TIGR03767 divide a narrow clade of pfam00149-related enzymes.
Probab=99.50 E-value=6.4e-13 Score=131.12 Aligned_cols=92 Identities=21% Similarity=0.258 Sum_probs=64.7
Q ss_pred CceEEEE-eCe--EEEEEecccCC-----------CCCCHHHHHHHHHHHHhhccCCCCeEEEEEccccccCCCCC----
Q 012895 248 NLYYSFD-IAG--AHIIMLGSYTD-----------FDEDSAQYKWLKADLAKINRKKTPWIFVLLHAPWYNTNTAH---- 309 (454)
Q Consensus 248 ~~~ys~~-~g~--v~fi~Lds~~~-----------~~~~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~~~~~---- 309 (454)
..||+|+ .++ +++|+||+... -...++|++||+++|++... +.+++|+++|+|+.......
T Consensus 292 ~~yYsFd~~g~vplrvIvLDSt~~~~~~s~pG~~~G~Ld~eQLaWLe~~La~a~a-~~p~VVV~hHpPi~t~gi~~md~w 370 (492)
T TIGR03768 292 FACYSFVPKSDVPLKVIVLDDTQSEHDGSHDIHGHGSLDAKRWDWLKAELARGQA-DGQLMIIAAHIPIAVSPIGSEMEW 370 (492)
T ss_pred cceeEEecCCCcceEEEEECCCccccccCCCCCcceeeCHHHHHHHHHHHHhCcC-CCceEEEEeCCCcccCCccchhhh
Confidence 4599999 574 49999998641 11459999999999998864 44667888888876422211
Q ss_pred C---------CCcHHHHHHHHHHHHhc-CCcEEEecccccc
Q 012895 310 Q---------GEGESMRNSMEELLYNA-RVDVVFAGHVHAY 340 (454)
Q Consensus 310 ~---------~~~~~~~~~l~~ll~~~-~v~lvl~GH~H~y 340 (454)
. ........+|..+|.+| +|.++||||.|..
T Consensus 371 ~~~~~~~~~~L~n~~~~~eLlaLL~~hPnVla~LsGHvHrn 411 (492)
T TIGR03768 371 WLGAADANPDLQNAVSLTGLVTTLQKYPNLLMWIAGHRHLN 411 (492)
T ss_pred ccccccccccccccccHHHHHHHHhcCCCeEEEEcCCcccc
Confidence 0 00011124899999999 5889999999963
No 32
>PF14008 Metallophos_C: Iron/zinc purple acid phosphatase-like protein C; PDB: 3KBP_B 1KBP_B 4KBP_C 2QFP_B 2QFR_A 1XZW_B.
Probab=99.42 E-value=3.9e-13 Score=98.04 Aligned_cols=62 Identities=35% Similarity=0.737 Sum_probs=41.2
Q ss_pred CCcEEEEECCCCCCCCcccccCCCCCCCceeeecccCEEEEEEecCCeEEEEEEEecCCCceeeeEE
Q 012895 354 CGPIYITIGDGGNREGLALEFKEPKSPLSMFQESSFGHARLKILDETRAHWSWYRNNDSDAVIADEV 420 (454)
Q Consensus 354 ~g~~yi~~G~gG~~~~~~~~~~~~~p~~~~~~~~~~G~~~l~v~~~~~~~~~~~~~~dg~~~~~D~~ 420 (454)
++|+||++|+||+ ++. .+..++|+|++++..+|||++|++.|.|+|+|+|++++||+ ++|+|
T Consensus 1 kapVhiv~G~aG~--~l~-~~~~~~~~wsa~r~~~~Gy~~l~v~N~T~l~~e~i~~~~g~--v~D~f 62 (62)
T PF14008_consen 1 KAPVHIVVGAAGN--GLD-PFPYPPPEWSAFRDSEYGYGRLTVANATHLHWEFIRSDDGS--VLDEF 62 (62)
T ss_dssp TS-EEEEE--S-T-------B-SS--TTEEEEE---EEEEEEE-SSSEEEEEEEETTS-T---CEE-
T ss_pred CCCEEEEECcCCC--Ccc-cccCCCCCeeeeeccccCEEEEEEEcCCeEEEEEEECCCCc--EecCC
Confidence 3799999999999 343 47678899999999999999999999999999999998887 99997
No 33
>cd00838 MPP_superfamily metallophosphatase superfamily, metallophosphatase domain. Metallophosphatases (MPPs), also known as metallophosphoesterases, phosphodiesterases (PDEs), binuclear metallophosphoesterases, and dimetal-containing phosphoesterases (DMPs), represent a diverse superfamily of enzymes with a conserved domain containing an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. This superfamily includes: the phosphoprotein phosphatases (PPPs), Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive me
Probab=99.36 E-value=7.8e-12 Score=105.15 Aligned_cols=116 Identities=25% Similarity=0.309 Sum_probs=83.9
Q ss_pred EEEecCCCCCChHHHH---HHhhcCCCCeEeecCccccCCCChhhHHHHhhhhhhhhcCCCeeecCCCcccCCCCCCCcc
Q 012895 151 AIVGDLGQTEWTNSTL---DHVGSKDYDVFLLPGDLSYADFQQPLWDSFGRLVEPYASSRPWMVTEGNHEIESIPIILPH 227 (454)
Q Consensus 151 ~~igD~~~~~~~~~~l---~~i~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~~~~~ 227 (454)
+++||+|......... ....+.++|+||++||+++....... ..+...........|+++++||||
T Consensus 1 ~~~gD~h~~~~~~~~~~~~~~~~~~~~~~vi~~GD~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~GNHD---------- 69 (131)
T cd00838 1 AVISDIHGNLEALEAVLEAALAAAEKPDFVLVLGDLVGDGPDPEE-VLAAALALLLLLGIPVYVVPGNHD---------- 69 (131)
T ss_pred CeeecccCCccchHHHHHHHHhcccCCCEEEECCcccCCCCCchH-HHHHHHHHhhcCCCCEEEeCCCce----------
Confidence 4789999876544433 35567899999999999986665332 222222233334599999999999
Q ss_pred hhhhhhhhccCCCCCCCCCCCceEEEEeCeEEEEEecccCCCCCCHHHHHHHHHHHHhhccCCCCeEEEEEccccccCCC
Q 012895 228 AFKAYNARWLMPYEESGSSSNLYYSFDIAGAHIIMLGSYTDFDEDSAQYKWLKADLAKINRKKTPWIFVLLHAPWYNTNT 307 (454)
Q Consensus 228 ~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~Lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~~~ 307 (454)
|+++|.|++....
T Consensus 70 -------------------------------------------------------------------i~~~H~~~~~~~~ 82 (131)
T cd00838 70 -------------------------------------------------------------------ILLTHGPPYDPLD 82 (131)
T ss_pred -------------------------------------------------------------------EEEeccCCCCCch
Confidence 8999999876654
Q ss_pred CCCCCcHHHHHHHHHHHHhcCCcEEEecccccceeee
Q 012895 308 AHQGEGESMRNSMEELLYNARVDVVFAGHVHAYERFT 344 (454)
Q Consensus 308 ~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~y~r~~ 344 (454)
.........+..+..++.+.+++++|+||.|.+.+..
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~GH~H~~~~~~ 119 (131)
T cd00838 83 ELSPDEDPGSEALLELLEKYGVDLVLSGHTHVYERRE 119 (131)
T ss_pred hhcccchhhHHHHHHHHHHhCCCEEEeCCeecccccc
Confidence 3222222246788899999999999999999988765
No 34
>cd07379 MPP_239FB Homo sapiens 239FB and related proteins, metallophosphatase domain. 239FB (Fetal brain protein 239) is thought to play a role in central nervous system development, but its specific role in unknown. 239FB is expressed predominantly in human fetal brain from a gene located in the chromosome 11p13 region associated with the mental retardation component of the WAGR (Wilms tumor, Aniridia, Genitourinary anomalies, Mental retardation) syndrome. Orthologous brp-like (brain protein 239-like) proteins have been identified in the invertebrate amphioxus group and in vertebrates. 239FB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzyme
Probab=99.36 E-value=8.1e-12 Score=106.88 Aligned_cols=117 Identities=17% Similarity=0.203 Sum_probs=77.8
Q ss_pred EEEEEecCCCCCChHHHHHHhhcCCCCeEeecCccccCCCChhhHHHHhhhhhhhhcCCCeeecCCCcccCCCCCCCcch
Q 012895 149 EFAIVGDLGQTEWTNSTLDHVGSKDYDVFLLPGDLSYADFQQPLWDSFGRLVEPYASSRPWMVTEGNHEIESIPIILPHA 228 (454)
Q Consensus 149 ~f~~igD~~~~~~~~~~l~~i~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~~~~~~ 228 (454)
||+++||+|.... .+...++|+|+++||+++.... ..++.+.+.++.+. ..++++++||||...
T Consensus 1 ~i~~isD~H~~~~------~~~~~~~D~vi~~GD~~~~~~~-~~~~~~~~~l~~~~-~~~~~~v~GNHD~~~-------- 64 (135)
T cd07379 1 RFVCISDTHSRHR------TISIPDGDVLIHAGDLTERGTL-EELQKFLDWLKSLP-HPHKIVIAGNHDLTL-------- 64 (135)
T ss_pred CEEEEeCCCCCCC------cCcCCCCCEEEECCCCCCCCCH-HHHHHHHHHHHhCC-CCeEEEEECCCCCcC--------
Confidence 5899999997644 3345789999999999875432 33444555554442 123578999999720
Q ss_pred hhhhhhhccCCCCCCCCCCCceEEEEeCeEEEEEecccCCCCCCHHHHHHHHHHHHhhccCCCCeEEEEEccccccCCCC
Q 012895 229 FKAYNARWLMPYEESGSSSNLYYSFDIAGAHIIMLGSYTDFDEDSAQYKWLKADLAKINRKKTPWIFVLLHAPWYNTNTA 308 (454)
Q Consensus 229 ~~~~~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~Lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~~~~ 308 (454)
. . . .+.|+++|.|++.....
T Consensus 65 -------------------~-------------------------------------~---~-~~~ilv~H~~p~~~~~~ 84 (135)
T cd07379 65 -------------------D-------------------------------------P---E-DTDILVTHGPPYGHLDL 84 (135)
T ss_pred -------------------C-------------------------------------C---C-CCEEEEECCCCCcCccc
Confidence 0 1 1 13789999998775432
Q ss_pred CCCCcHHHHHHHHHHHHhcCCcEEEecccccce
Q 012895 309 HQGEGESMRNSMEELLYNARVDVVFAGHVHAYE 341 (454)
Q Consensus 309 ~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~y~ 341 (454)
.........+.+.+++.+++++++++||+|...
T Consensus 85 ~~~~~~~g~~~~~~~~~~~~~~~~i~GH~H~~~ 117 (135)
T cd07379 85 VSSGQRVGCEELLNRVQRVRPKLHVFGHIHEGY 117 (135)
T ss_pred cccCcccCCHHHHHHHHHHCCcEEEEcCcCCcC
Confidence 211111223567777888999999999999853
No 35
>cd07397 MPP_DevT Myxococcus xanthus DevT and related proteins, metallophosphatase domain. DevT is a component in the C-signal response pathway in Myxococcus xanthus that stimulates the developmentally regulated expression of the FruA response regulator protein and is required for methylation of FrzCD during fruiting body formation. DevT mutants having an in-frame deletion in the devT gene, display delayed aggregation and a cell autonomous sporulation defect. DevT belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomy
Probab=99.34 E-value=4.1e-11 Score=110.75 Aligned_cols=195 Identities=17% Similarity=0.199 Sum_probs=100.0
Q ss_pred eEEEEEecCCCCCChHHHHHHhhcCCCCeEeecCccccCCCChhhHHHHhhhhhhhhcCCCeeecCCCcccCCCCCCCcc
Q 012895 148 IEFAIVGDLGQTEWTNSTLDHVGSKDYDVFLLPGDLSYADFQQPLWDSFGRLVEPYASSRPWMVTEGNHEIESIPIILPH 227 (454)
Q Consensus 148 ~~f~~igD~~~~~~~~~~l~~i~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~~~~~ 227 (454)
+|++++||+|.... ....+.++..+||+||++||+++.. ..+.+.+..+ ..|+++++||||....... ..
T Consensus 1 ~rIa~isDiHg~~~-~~~~~~l~~~~pD~Vl~~GDi~~~~------~~~~~~l~~l--~~p~~~V~GNHD~~~~~~~-~~ 70 (238)
T cd07397 1 LRIAIVGDVHGQWD-LEDIKALHLLQPDLVLFVGDFGNES------VQLVRAISSL--PLPKAVILGNHDAWYDATF-RK 70 (238)
T ss_pred CEEEEEecCCCCch-HHHHHHHhccCCCEEEECCCCCcCh------HHHHHHHHhC--CCCeEEEcCCCcccccccc-cc
Confidence 58999999997533 2334566678999999999998531 1222233322 3799999999998543210 00
Q ss_pred hhhhhhhhccCCCCCCCCCCCceE---EEEeCeEEEEEecccCC----------------CC--CCHHHHHHHHHHHHhh
Q 012895 228 AFKAYNARWLMPYEESGSSSNLYY---SFDIAGAHIIMLGSYTD----------------FD--EDSAQYKWLKADLAKI 286 (454)
Q Consensus 228 ~~~~~~~~~~~p~~~~~~~~~~~y---s~~~g~v~fi~Lds~~~----------------~~--~~~~Q~~WL~~~L~~~ 286 (454)
....+.+...... .... ..++....+.++.+... |. ..++-.+.+.+.++..
T Consensus 71 k~~~l~~~L~~lg-------~~~l~~~~~~~~~~~~~vvG~R~~~~~g~~~~~~~~vr~~fgi~s~~eA~~~ive~~~~~ 143 (238)
T cd07397 71 KGDRVQEQLELLG-------DLHCGWGRLDFPPLPLSVVGGRPFSAGGGFWLSKKAVKAVYGVISLEESAQRIIAAAKKA 143 (238)
T ss_pred hHHHHHHHHHHhC-------CcEEeecccccCCCCeEEEeeCCccCCCccccCHHHHHHHhCCCCHHHHHHHHHHHhhhc
Confidence 1222332221111 1111 11222222222222110 10 1123334444555433
Q ss_pred ccCCCCeEEEEEccccccCCCC--------CC----CCc-HHHHHHHHHHHHhcCCcEEEecccccceeeec-ccCC-Cc
Q 012895 287 NRKKTPWIFVLLHAPWYNTNTA--------HQ----GEG-ESMRNSMEELLYNARVDVVFAGHVHAYERFTR-IYDN-KA 351 (454)
Q Consensus 287 ~~~~~~w~Iv~~H~P~~~~~~~--------~~----~~~-~~~~~~l~~ll~~~~v~lvl~GH~H~y~r~~~-~~~~-~~ 351 (454)
.. ..+ .|++.|.++...++. +. ..+ .++.+++..+-..-.++++++||.|.--+... +... ..
T Consensus 144 ~~-~~~-~VliaH~~~~G~g~~~~~~cg~d~~~~~~~~G~~~l~~ai~~~~~~~~~~l~~fGH~H~~l~~~~~~r~~~~~ 221 (238)
T cd07397 144 PP-DLP-LILLAHNGPSGLGSDAEDPCGRDWKPPGGDWGDPDLALAISQIQQGRQVPLVVFGHMHHRLRRGKGLRNMIAV 221 (238)
T ss_pred CC-CCC-eEEEeCcCCcCCCcccccccccccCCcCCCCCCHHHHHHHHHHhccCCCCEEEeCCccCcccccccccceeee
Confidence 22 223 799999998665421 10 011 24556665544334589999999998432221 1100 13
Q ss_pred CCCCcEEEEE
Q 012895 352 DPCGPIYITI 361 (454)
Q Consensus 352 ~~~g~~yi~~ 361 (454)
+..|++|+..
T Consensus 222 ~~~gt~y~N~ 231 (238)
T cd07397 222 DREGTVYLNA 231 (238)
T ss_pred cCCCeEEEec
Confidence 4578998854
No 36
>COG1408 Predicted phosphohydrolases [General function prediction only]
Probab=99.32 E-value=1.5e-11 Score=117.44 Aligned_cols=76 Identities=16% Similarity=0.181 Sum_probs=60.4
Q ss_pred CCCeEEEEEecCCCCCCh---HHHHHHhhcCCCCeEeecCccccCCCChhhHHHHhhhhhhhhcCCCeeecCCCcccCCC
Q 012895 145 NFPIEFAIVGDLGQTEWT---NSTLDHVGSKDYDVFLLPGDLSYADFQQPLWDSFGRLVEPYASSRPWMVTEGNHEIESI 221 (454)
Q Consensus 145 ~~~~~f~~igD~~~~~~~---~~~l~~i~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~ 221 (454)
..++++++++|+|..... .+.+..+.+..||+|+++||+++.. ....+..+.+.++++.+..++++++||||+...
T Consensus 42 ~~~~~iv~lSDlH~~~~~~~~~~~~~~i~~~~~DlivltGD~~~~~-~~~~~~~~~~~L~~L~~~~gv~av~GNHd~~~~ 120 (284)
T COG1408 42 LQGLKIVQLSDLHSLPFREEKLALLIAIANELPDLIVLTGDYVDGD-RPPGVAALALFLAKLKAPLGVFAVLGNHDYGVD 120 (284)
T ss_pred cCCeEEEEeehhhhchhhHHHHHHHHHHHhcCCCEEEEEeeeecCC-CCCCHHHHHHHHHhhhccCCEEEEecccccccc
Confidence 578999999999987665 3445556678889999999999851 223456677888888888999999999999643
No 37
>PF12850 Metallophos_2: Calcineurin-like phosphoesterase superfamily domain; InterPro: IPR024654 Domains in this entry are members of the calcineurin-like phosphoesterase domain superfamily [].; PDB: 2GJU_A 1Z2W_A 1Z2X_B 3PSO_B 3PSN_B 1W24_A 2R17_B 3QFN_B 3QFO_A 3QFM_A ....
Probab=99.23 E-value=5e-11 Score=104.25 Aligned_cols=138 Identities=23% Similarity=0.319 Sum_probs=81.4
Q ss_pred eEEEEEecCCCCCCh-HHHHHHhhcCCCCeEeecCccccCCCChhhHHHHhhhhhhhhcCCCeeecCCCcccCCCCCCCc
Q 012895 148 IEFAIVGDLGQTEWT-NSTLDHVGSKDYDVFLLPGDLSYADFQQPLWDSFGRLVEPYASSRPWMVTEGNHEIESIPIILP 226 (454)
Q Consensus 148 ~~f~~igD~~~~~~~-~~~l~~i~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~~~~ 226 (454)
+||+++||+|..... .++++.+ .++|+|+++||+++. ..+.+.++.+ |++++.||||..
T Consensus 1 Mki~~~sD~H~~~~~~~~~~~~~--~~~d~vi~~GDi~~~-------~~~~~~~~~~----~~~~v~GNHD~~------- 60 (156)
T PF12850_consen 1 MKIAVISDLHGNLDALEAVLEYI--NEPDFVIILGDIFDP-------EEVLELLRDI----PVYVVRGNHDNW------- 60 (156)
T ss_dssp EEEEEEE--TTTHHHHHHHHHHH--TTESEEEEES-SCSH-------HHHHHHHHHH----EEEEE--CCHST-------
T ss_pred CEEEEEeCCCCChhHHHHHHHHh--cCCCEEEECCCchhH-------HHHHHHHhcC----CEEEEeCCcccc-------
Confidence 699999999986432 3566666 579999999999862 3333333333 899999999962
Q ss_pred chhhhhhhhccCCCCCCCCCCCceEEEEeCeEEEEEecccCCCCCCHHHHHHHHHHHHhhccCCCCeEEEEEccccccCC
Q 012895 227 HAFKAYNARWLMPYEESGSSSNLYYSFDIAGAHIIMLGSYTDFDEDSAQYKWLKADLAKINRKKTPWIFVLLHAPWYNTN 306 (454)
Q Consensus 227 ~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~Lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~~ 306 (454)
. +....... + .+......-....|+++|.+++...
T Consensus 61 -~---~~~~~~~~----------~-------------------------------~~~~~~~~~~~~~i~~~H~~~~~~~ 95 (156)
T PF12850_consen 61 -A---FPNENDEE----------Y-------------------------------LLDALRLTIDGFKILLSHGHPYDVQ 95 (156)
T ss_dssp -H---HHSEECTC----------S-------------------------------SHSEEEEEETTEEEEEESSTSSSST
T ss_pred -c---chhhhhcc----------c-------------------------------cccceeeeecCCeEEEECCCCcccc
Confidence 1 11111000 0 0000000011347889998766532
Q ss_pred CCCCCCcHHHHHHHHHHHHhcCCcEEEecccccceeeecccCCCcCCCCcEEEEECCCCC
Q 012895 307 TAHQGEGESMRNSMEELLYNARVDVVFAGHVHAYERFTRIYDNKADPCGPIYITIGDGGN 366 (454)
Q Consensus 307 ~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~y~r~~~~~~~~~~~~g~~yi~~G~gG~ 366 (454)
...+.+..++...+++++++||.|..+... .+++.++..|+-+.
T Consensus 96 --------~~~~~~~~~~~~~~~~~~~~GH~H~~~~~~--------~~~~~~~~~Gs~~~ 139 (156)
T PF12850_consen 96 --------WDPAELREILSRENVDLVLHGHTHRPQVFK--------IGGIHVINPGSIGG 139 (156)
T ss_dssp --------TTHHHHHHHHHHTTSSEEEESSSSSEEEEE--------ETTEEEEEE-GSSS
T ss_pred --------cChhhhhhhhcccCCCEEEcCCcccceEEE--------ECCEEEEECCcCCC
Confidence 123456677789999999999999976654 24677787776543
No 38
>cd08166 MPP_Cdc1_like_1 uncharacterized subgroup related to Saccharomyces cerevisiae CDC1, metallophosphatase domain. A functionally uncharacterized subgroup related to the metallophosphatase domain of Saccharomyces cerevisiae Cdc1, S. cerevisiae Ted1 and human MPPE1. Cdc1 is an endoplasmic reticulum-localized transmembrane lipid phosphatase and is a subunit of DNA polymerase delta. TED1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), acts together with Emp24p and Erv25p in cargo exit from the ER. The MPPE1 gene is a candidate susceptibility gene for Bipolar disorder. Proteins in this uncharacterized subgroup belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like R
Probab=99.23 E-value=6.6e-11 Score=105.94 Aligned_cols=108 Identities=14% Similarity=0.248 Sum_probs=70.0
Q ss_pred hhcCCCCeEeecCccccCCCCh--hhHHHHhhhhhhh---hcCCCeeecCCCcccCCCCCC-CcchhhhhhhhccCCCCC
Q 012895 169 VGSKDYDVFLLPGDLSYADFQQ--PLWDSFGRLVEPY---ASSRPWMVTEGNHEIESIPII-LPHAFKAYNARWLMPYEE 242 (454)
Q Consensus 169 i~~~~pd~vl~~GDl~y~~~~~--~~~~~~~~~~~~l---~~~~P~~~v~GNHD~~~~~~~-~~~~~~~~~~~~~~p~~~ 242 (454)
+...+||+|+++||+++.+... .+|....+.+.++ ...+|++.++||||+++.... ..+....|.+.|
T Consensus 38 ~~~l~PD~Vi~lGDL~D~G~~~~~~e~~e~l~Rf~~If~~~~~~~~~~VpGNHDIG~~~~~~~~~~v~RF~~~F------ 111 (195)
T cd08166 38 LNFVQPDIVIFLGDLMDEGSIANDDEYYSYVQRFINIFEVPNGTKIIYLPGDNDIGGEEEDPIESKIRRFEKYF------ 111 (195)
T ss_pred HhccCCCEEEEeccccCCCCCCCHHHHHHHHHHHHHHhcCCCCCcEEEECCCCCcCCCCCCcCHHHHHHHHHhh------
Confidence 3467999999999999987652 2233322222222 224899999999999643210 011112222111
Q ss_pred CCCCCCceEEEEeCeEEEEEecccCCCCCCHHHHHHHHHHHHhhccCCCCeEEEEEccccccCCCCCCCCcHHHHHHHHH
Q 012895 243 SGSSSNLYYSFDIAGAHIIMLGSYTDFDEDSAQYKWLKADLAKINRKKTPWIFVLLHAPWYNTNTAHQGEGESMRNSMEE 322 (454)
Q Consensus 243 ~~~~~~~~ys~~~g~v~fi~Lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ 322 (454)
|++.|.|+..... ..+..
T Consensus 112 ----------------------------------------------------i~lsH~P~~~~~~----------~~~~~ 129 (195)
T cd08166 112 ----------------------------------------------------IMLSHVPLLAEGG----------QALKH 129 (195)
T ss_pred ----------------------------------------------------eeeeccccccccc----------HHHHH
Confidence 8999999865332 26678
Q ss_pred HHHhcCCcEEEecccccceeee
Q 012895 323 LLYNARVDVVFAGHVHAYERFT 344 (454)
Q Consensus 323 ll~~~~v~lvl~GH~H~y~r~~ 344 (454)
++.+++++++|+||.|.+....
T Consensus 130 ~~~~~~p~~Ifs~H~H~s~~~~ 151 (195)
T cd08166 130 VVTDLDPDLIFSAHRHKSSIFM 151 (195)
T ss_pred HHHhcCceEEEEcCccceeeEE
Confidence 8899999999999999976554
No 39
>KOG3770 consensus Acid sphingomyelinase and PHM5 phosphate metabolism protein [Lipid transport and metabolism]
Probab=99.22 E-value=3.9e-10 Score=114.09 Aligned_cols=172 Identities=24% Similarity=0.374 Sum_probs=104.2
Q ss_pred HHHHHhh--cCCCCeEeecCccccCCCChh----hH---HHHhhhhhhhhcCCCeeecCCCcccCCCCCCCc-----c--
Q 012895 164 STLDHVG--SKDYDVFLLPGDLSYADFQQP----LW---DSFGRLVEPYASSRPWMVTEGNHEIESIPIILP-----H-- 227 (454)
Q Consensus 164 ~~l~~i~--~~~pd~vl~~GDl~y~~~~~~----~~---~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~~~~-----~-- 227 (454)
.+|++|+ ..++|+|+++||++..+.+.. .. ..+.+.+......+|+|+..||||......+.. .
T Consensus 199 s~L~~ike~~~~iD~I~wTGD~~~H~~w~~t~~~~l~~~~~l~~~~~e~FpdvpvypalGNhe~~P~N~F~~~~~~~~~~ 278 (577)
T KOG3770|consen 199 SALDHIKENHKDIDYIIWTGDNVAHDVWAQTEEENLSMLSRLTSLLSEYFPDVPVYPALGNHEIHPVNLFAPGSVPKRHS 278 (577)
T ss_pred HHHHHHHhcCCCCCEEEEeCCCCcccchhhhHHHHHHHHHHHHHHHHHhCCCCceeeecccCCCCcHhhcCCCCCcchhh
Confidence 4677776 334999999999998764411 11 122334444455799999999999975433211 1
Q ss_pred ---hhhhhhhhcc--CCCCCC-CCCCCceEE-EEeCeEEEEEecccCCC----------CCCHHHHHHHHHHHHhhccCC
Q 012895 228 ---AFKAYNARWL--MPYEES-GSSSNLYYS-FDIAGAHIIMLGSYTDF----------DEDSAQYKWLKADLAKINRKK 290 (454)
Q Consensus 228 ---~~~~~~~~~~--~p~~~~-~~~~~~~ys-~~~g~v~fi~Lds~~~~----------~~~~~Q~~WL~~~L~~~~~~~ 290 (454)
-|..+...|. +|.++. ....+.+|. ..+++.++|.||+..-+ .....|++|+..+|.+++.++
T Consensus 279 ~~wly~~~~~~W~~wlp~e~~~t~~kga~Y~~~~~~Glr~IslNt~~c~~~N~~L~~n~tdp~~~lqWf~~~L~~ae~~G 358 (577)
T KOG3770|consen 279 QLWLYKHLAGAWSTWLPAEAKETFLKGAYYLVLVIDGLRLISLNTNYCSAPNFWLYANQTDPIDQLQWFVDQLQEAESAG 358 (577)
T ss_pred hhHHHHHHHhhhhccCCHHHHhhhhcCcEEEEeecCCceEEEeccccccccceeeeecCCCchHHhhHHHHHHHHHHhcC
Confidence 0112222221 233211 112345565 44688999999985321 235788999999999987655
Q ss_pred CCeEEEEEccccccCCCCCCCCcHHHHHHHHHHHHhcC--CcEEEecccccce
Q 012895 291 TPWIFVLLHAPWYNTNTAHQGEGESMRNSMEELLYNAR--VDVVFAGHVHAYE 341 (454)
Q Consensus 291 ~~w~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~--v~lvl~GH~H~y~ 341 (454)
.+ |=+++|.|+-.. ....+. ...+-.++.++. +...|.||.|.-+
T Consensus 359 ek-Vhil~HIPpG~~-~c~~~w----s~~f~~iv~r~~~tI~gqf~GH~h~d~ 405 (577)
T KOG3770|consen 359 EK-VHILGHIPPGDG-VCLEGW----SINFYRIVNRFRSTIAGQFYGHTHIDE 405 (577)
T ss_pred CE-EEEEEeeCCCCc-chhhhh----hHHHHHHHHHHHHhhhhhccccCccee
Confidence 44 889999997431 111122 234555555553 6678999999844
No 40
>PRK05340 UDP-2,3-diacylglucosamine hydrolase; Provisional
Probab=99.20 E-value=1.9e-10 Score=108.38 Aligned_cols=174 Identities=17% Similarity=0.191 Sum_probs=92.1
Q ss_pred eEEEEEecCCCCCChH----HHHHHhh--cCCCCeEeecCccccCC----CChhhHHHHhhhhhhhhcC-CCeeecCCCc
Q 012895 148 IEFAIVGDLGQTEWTN----STLDHVG--SKDYDVFLLPGDLSYAD----FQQPLWDSFGRLVEPYASS-RPWMVTEGNH 216 (454)
Q Consensus 148 ~~f~~igD~~~~~~~~----~~l~~i~--~~~pd~vl~~GDl~y~~----~~~~~~~~~~~~~~~l~~~-~P~~~v~GNH 216 (454)
+|++++||+|.+.... ..++.+. ..+||+|+++||+++.- ..........+.++.+... +|+++++|||
T Consensus 1 M~i~~iSDlHl~~~~~~~~~~~~~~l~~~~~~~d~l~i~GDl~d~~~g~~~~~~~~~~~~~~l~~l~~~g~~v~~v~GNH 80 (241)
T PRK05340 1 MPTLFISDLHLSPERPAITAAFLRFLRGEARQADALYILGDLFEAWIGDDDPSPFAREIAAALKALSDSGVPCYFMHGNR 80 (241)
T ss_pred CcEEEEeecCCCCCChhHHHHHHHHHHhhhccCCEEEEccceeccccccCcCCHHHHHHHHHHHHHHHcCCeEEEEeCCC
Confidence 5899999999875432 2344442 46899999999999631 1122234455666666655 8999999999
Q ss_pred ccCCCCCCCcchhhhhhhhccCCCCCCCCCCCceEEEEeCeEEEEEecccCCCCCCHHHHHHHHHHHHhhccCCCCeEEE
Q 012895 217 EIESIPIILPHAFKAYNARWLMPYEESGSSSNLYYSFDIAGAHIIMLGSYTDFDEDSAQYKWLKADLAKINRKKTPWIFV 296 (454)
Q Consensus 217 D~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~Lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~w~Iv 296 (454)
|.... ..+.+...+.. -+....+++++.++++.-..... .....++++.+.+... |...
T Consensus 81 D~~~~--------~~~~~~~g~~~------l~~~~~~~~~g~~i~l~HGd~~~-~~d~~y~~~r~~~r~~------~~~~ 139 (241)
T PRK05340 81 DFLLG--------KRFAKAAGMTL------LPDPSVIDLYGQRVLLLHGDTLC-TDDKAYQRFRRKVRNP------WLQW 139 (241)
T ss_pred chhhh--------HHHHHhCCCEE------eCCcEEEEECCEEEEEECCcccc-cCCHHHHHHHHHHhCH------HHHH
Confidence 97321 11222221110 01233466777777766432111 1123333333332221 1111
Q ss_pred EEccccccCC---------------C-CCCCCcHHHHHHHHHHHHhcCCcEEEeccccccee
Q 012895 297 LLHAPWYNTN---------------T-AHQGEGESMRNSMEELLYNARVDVVFAGHVHAYER 342 (454)
Q Consensus 297 ~~H~P~~~~~---------------~-~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~y~r 342 (454)
+.|.+++... . ..........+.+.+++.+++++++++||+|.-..
T Consensus 140 ~~~~~p~~~~~~ia~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~GH~H~~~~ 201 (241)
T PRK05340 140 LFLALPLSIRLRIAAKMRAKSKAANQSKSLEIMDVNPEAVAALMEKHGVDTLIHGHTHRPAI 201 (241)
T ss_pred HHHhCCHHHHHHHHHHHHHHHHHhcCCCcccccCCCHHHHHHHHHHhCCCEEEECcccCcce
Confidence 1122211100 0 00000001125677888999999999999998544
No 41
>COG2129 Predicted phosphoesterases, related to the Icc protein [General function prediction only]
Probab=99.17 E-value=7.2e-10 Score=99.60 Aligned_cols=178 Identities=19% Similarity=0.205 Sum_probs=107.7
Q ss_pred CCeEEEEEecCCCCCCh-HHHHHHhhcCCCCeEeecCccc--cCCCChhhHHHHhhhhhhhh-cCCCeeecCCCcccCCC
Q 012895 146 FPIEFAIVGDLGQTEWT-NSTLDHVGSKDYDVFLLPGDLS--YADFQQPLWDSFGRLVEPYA-SSRPWMVTEGNHEIESI 221 (454)
Q Consensus 146 ~~~~f~~igD~~~~~~~-~~~l~~i~~~~pd~vl~~GDl~--y~~~~~~~~~~~~~~~~~l~-~~~P~~~v~GNHD~~~~ 221 (454)
..+|+++++|+|..... .+.++.++..++|+++++||++ +-+.....-+.. .++.+. ..+|+++++||.|...
T Consensus 2 ~~mkil~vtDlHg~~~~~~k~~~~~~~~~~D~lviaGDlt~~~~~~~~~~~~~~--~~e~l~~~~~~v~avpGNcD~~~- 78 (226)
T COG2129 2 KKMKILAVTDLHGSEDSLKKLLNAAADIRADLLVIAGDLTYFHFGPKEVAEELN--KLEALKELGIPVLAVPGNCDPPE- 78 (226)
T ss_pred CcceEEEEeccccchHHHHHHHHHHhhccCCEEEEecceehhhcCchHHHHhhh--HHHHHHhcCCeEEEEcCCCChHH-
Confidence 36899999999987543 4555556677999999999999 333321111110 034444 3499999999988731
Q ss_pred CCCCcchhhhhhhhccCCCCCCCCCCCceEEEEeCeEEEEEeccc--CCC----CCCHHH-HHHHHHHHHhhccCCCCeE
Q 012895 222 PIILPHAFKAYNARWLMPYEESGSSSNLYYSFDIAGAHIIMLGSY--TDF----DEDSAQ-YKWLKADLAKINRKKTPWI 294 (454)
Q Consensus 222 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~Lds~--~~~----~~~~~Q-~~WL~~~L~~~~~~~~~w~ 294 (454)
-.....+ ....- .--..+++++.|+++--. +.+ ...+++ +.-|++-+...+. .-.
T Consensus 79 ------v~~~l~~-~~~~v--------~~~v~~i~~~~~~G~Ggsn~tp~nt~~e~~E~~I~s~l~~~v~~~~~---~~~ 140 (226)
T COG2129 79 ------VIDVLKN-AGVNV--------HGRVVEIGGYGFVGFGGSNPTPFNTPREFSEDEIYSKLKSLVKKADN---PVN 140 (226)
T ss_pred ------HHHHHHh-ccccc--------ccceEEecCcEEEEecccCCCCCCCccccCHHHHHHHHHHHHhcccC---cce
Confidence 1111111 11111 114567788888875321 111 122333 2344444444422 113
Q ss_pred EEEEccccccCCCCCCCC-cHHHHHHHHHHHHhcCCcEEEecccccceeee
Q 012895 295 FVLLHAPWYNTNTAHQGE-GESMRNSMEELLYNARVDVVFAGHVHAYERFT 344 (454)
Q Consensus 295 Iv~~H~P~~~~~~~~~~~-~~~~~~~l~~ll~~~~v~lvl~GH~H~y~r~~ 344 (454)
|+++|+|||+....-... .......+.+++++.++.+.+|||+|.+.-..
T Consensus 141 Il~~HaPP~gt~~d~~~g~~hvGS~~vr~~ieefqP~l~i~GHIHEs~G~d 191 (226)
T COG2129 141 ILLTHAPPYGTLLDTPSGYVHVGSKAVRKLIEEFQPLLGLHGHIHESRGID 191 (226)
T ss_pred EEEecCCCCCccccCCCCccccchHHHHHHHHHhCCceEEEeeeccccccc
Confidence 999999999876542111 23456788999999999999999999854443
No 42
>cd07389 MPP_PhoD Bacillus subtilis PhoD and related proteins, metallophosphatase domain. PhoD (also known as alkaline phosphatase D/APaseD in Bacillus subtilis) is a secreted phosphodiesterase encoded by phoD of the Pho regulon in Bacillus subtilis. PhoD homologs are found in prokaryotes, eukaryotes, and archaea. PhoD contains a twin arginine (RR) motif and is transported by the Tat (Twin-arginine translocation) translocation pathway machinery (TatAyCy). This family also includes the Fusarium oxysporum Fso1 protein. PhoD belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF
Probab=99.16 E-value=7.9e-10 Score=103.35 Aligned_cols=157 Identities=20% Similarity=0.160 Sum_probs=102.0
Q ss_pred EEEEEecCCCCCChHHHHHHhh----cCCCCeEeecCccccCCCC-------------------------hhhHHHH--h
Q 012895 149 EFAIVGDLGQTEWTNSTLDHVG----SKDYDVFLLPGDLSYADFQ-------------------------QPLWDSF--G 197 (454)
Q Consensus 149 ~f~~igD~~~~~~~~~~l~~i~----~~~pd~vl~~GDl~y~~~~-------------------------~~~~~~~--~ 197 (454)
||++.|+.+...........+. +.+||++|++||.+|++.. ...|..+ .
T Consensus 1 r~a~~SC~~~~~~~~~~~~~~~~~~~~~~~d~~l~~GD~IY~d~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~Y~~~~~~ 80 (228)
T cd07389 1 RFAFGSCNKYESGYFNAYRALAYDHSEEDPDLFLHLGDQIYADDVGGLMPALIEGRPLEPAHEALTLEEYRERYRQYRSD 80 (228)
T ss_pred CEEEEECCCCCCCCcHHHHHHhhhccccCCCEEEEcCCeecccCCCcccccccCCcCcCCcccccCHHHHHHHHHHHcCC
Confidence 5888999877665555555664 7899999999999998852 0111111 1
Q ss_pred hhhhhhhcCCCeeecCCCcccCCCCCCC--------------cchhhhhhhhccCCCCCCC--CCCCceEEEEeCeE-EE
Q 012895 198 RLVEPYASSRPWMVTEGNHEIESIPIIL--------------PHAFKAYNARWLMPYEESG--SSSNLYYSFDIAGA-HI 260 (454)
Q Consensus 198 ~~~~~l~~~~P~~~v~GNHD~~~~~~~~--------------~~~~~~~~~~~~~p~~~~~--~~~~~~ys~~~g~v-~f 260 (454)
..++.+.+.+|++.++++||+.++.... ......|.+..+.+..... .....|+++.+|.. .|
T Consensus 81 p~~~~~~~~~p~~~iwDDHDi~~n~~~~~~~~~~~~~~~~~~~~a~~ay~e~~~~~~~~~~~~~~~~~y~~~~~G~~~~~ 160 (228)
T cd07389 81 PDLQRLLAQVPTIGIWDDHDIGDNWGGDGAWVQDSPVFYARKAAARQAYLEFQPVRNPSPRRGGRGGIYRSFRFGDLVDL 160 (228)
T ss_pred HHHHHHhhcCCEEEeccccccccccccccccccCcchHHHHHHHHHHHHHHHcCCCCCCccCCCCceEEEEEecCCcceE
Confidence 2345566779999999999997653320 1123345555544433222 23578999999996 99
Q ss_pred EEecccCCCCCCHHHHHHHHHHHHhhccCCCCeEEEEEccccccCCCCCCCCcHHHHHHHHHHHHhcC--CcEEEecccc
Q 012895 261 IMLGSYTDFDEDSAQYKWLKADLAKINRKKTPWIFVLLHAPWYNTNTAHQGEGESMRNSMEELLYNAR--VDVVFAGHVH 338 (454)
Q Consensus 261 i~Lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~--v~lvl~GH~H 338 (454)
++||+.... ..+ ......|+++..++.+.+ -.++|+|++|
T Consensus 161 ~~lD~R~~R-------------------------------------d~W-~~~~~er~~l~~~~~~~~~~~vv~lSGDvH 202 (228)
T cd07389 161 ILLDTRTYR-------------------------------------DSW-DGYPAERERLLDLLAKRKIKNVVFLSGDVH 202 (228)
T ss_pred EEEeccccc-------------------------------------ccc-cccHHHHHHHHHHHHHhCCCCeEEEecHHH
Confidence 999987643 111 112346777777755543 3389999999
Q ss_pred cceee
Q 012895 339 AYERF 343 (454)
Q Consensus 339 ~y~r~ 343 (454)
.....
T Consensus 203 ~~~~~ 207 (228)
T cd07389 203 LAEAS 207 (228)
T ss_pred HHHHh
Confidence 85443
No 43
>cd08165 MPP_MPPE1 human MPPE1 and related proteins, metallophosphatase domain. MPPE1 is a functionally uncharacterized metallophosphatase domain-containing protein. The MPPE1 gene is located on chromosome 18 and is a candidate susceptibility gene for Bipolar disorder. MPPE1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to
Probab=99.16 E-value=1.8e-10 Score=100.84 Aligned_cols=51 Identities=24% Similarity=0.303 Sum_probs=35.1
Q ss_pred hhcCCCCeEeecCccccCCCC--hhhHHHHhhhhhhhhc---CCCeeecCCCcccC
Q 012895 169 VGSKDYDVFLLPGDLSYADFQ--QPLWDSFGRLVEPYAS---SRPWMVTEGNHEIE 219 (454)
Q Consensus 169 i~~~~pd~vl~~GDl~y~~~~--~~~~~~~~~~~~~l~~---~~P~~~v~GNHD~~ 219 (454)
+.+.+||+|+++||+++.... ...|..+...+..+.. ..|+++++||||..
T Consensus 34 i~~~~pd~vv~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~GNHD~~ 89 (156)
T cd08165 34 LWLLQPDVVFVLGDLFDEGKWSTDEEWEDYVERFKKMFGHPPDLPLHVVVGNHDIG 89 (156)
T ss_pred HHhcCCCEEEECCCCCCCCccCCHHHHHHHHHHHHHHhccCCCCeEEEEcCCCCcC
Confidence 346899999999999976543 2345443333333322 47999999999984
No 44
>cd07384 MPP_Cdc1_like Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain. Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. This group also contains Saccharomyces cerevisiae TED1 (Trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), which acts together wit
Probab=99.11 E-value=4.8e-10 Score=99.68 Aligned_cols=51 Identities=24% Similarity=0.309 Sum_probs=35.9
Q ss_pred hcCCCCeEeecCccccCCCC--hhhHHHHhhhhhhhh-------cCCCeeecCCCcccCC
Q 012895 170 GSKDYDVFLLPGDLSYADFQ--QPLWDSFGRLVEPYA-------SSRPWMVTEGNHEIES 220 (454)
Q Consensus 170 ~~~~pd~vl~~GDl~y~~~~--~~~~~~~~~~~~~l~-------~~~P~~~v~GNHD~~~ 220 (454)
...+||+|+++||+++.... ...|....+.+..+. ..+|+++++||||+..
T Consensus 42 ~~~~pd~vi~lGDl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~GNHD~g~ 101 (171)
T cd07384 42 QRLKPDVVLFLGDLFDGGRIADSEEWEEYVKRFKKIFFLPSNGLEDIPVYYVPGNHDIGY 101 (171)
T ss_pred HhcCCCEEEEeccccCCcEeCCHHHHHHHHHHHHHHhcccccccCCceEEEECCccccCC
Confidence 47899999999999986543 234554443333332 1589999999999953
No 45
>cd00841 MPP_YfcE Escherichia coli YfcE and related proteins, metallophosphatase domain. YfcE is a manganase-dependent metallophosphatase, found in bacteria and archaea, that cleaves bis-p-nitrophenyl phosphate, thymidine 5'-monophosphate-p-nitrophenyl ester, and p-nitrophenyl phosphorylcholine, but is unable to hydrolyze 2',3 ' or 3',5' cyclic nucleic phosphodiesters, and various phosphomonoesters, including p-nitrophenyl phosphate. This family also includes the Bacilus subtilis YsnB and Methanococcus jannaschii MJ0936 proteins. This domain family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid ph
Probab=99.10 E-value=6.7e-10 Score=97.30 Aligned_cols=131 Identities=19% Similarity=0.226 Sum_probs=79.7
Q ss_pred EEEEEecCCCCCC-hHHHHHHhhcCCCCeEeecCccccCCCChhhHHHHhhhhhhhhcCCCeeecCCCcccCCCCCCCcc
Q 012895 149 EFAIVGDLGQTEW-TNSTLDHVGSKDYDVFLLPGDLSYADFQQPLWDSFGRLVEPYASSRPWMVTEGNHEIESIPIILPH 227 (454)
Q Consensus 149 ~f~~igD~~~~~~-~~~~l~~i~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~~~~~ 227 (454)
|++++||+|.... ..++++.++. +|.|+++||+++...... +....|++.++||||...
T Consensus 1 ~i~~isD~H~~~~~~~~~~~~~~~--~d~ii~~GD~~~~~~~~~-----------~~~~~~~~~V~GNhD~~~------- 60 (155)
T cd00841 1 KIGVISDTHGSLELLEKALELFGD--VDLIIHAGDVLYPGPLNE-----------LELKAPVIAVRGNCDGEV------- 60 (155)
T ss_pred CEEEEecCCCCHHHHHHHHHHhcC--CCEEEECCccccccccch-----------hhcCCcEEEEeCCCCCcC-------
Confidence 5899999997642 2234444433 999999999987543211 233478999999999831
Q ss_pred hhhhhhhhccCCCCCCCCCCCceEEEEeCeEEEEEecccCCCCCCHHHHHHHHHHHHhhccCCCCeEEEEEccccccCCC
Q 012895 228 AFKAYNARWLMPYEESGSSSNLYYSFDIAGAHIIMLGSYTDFDEDSAQYKWLKADLAKINRKKTPWIFVLLHAPWYNTNT 307 (454)
Q Consensus 228 ~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~Lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~~~ 307 (454)
+ ...+|. ...++++ .++|+++|.+......
T Consensus 61 -~-----~~~~p~---------~~~~~~~-----------------------------------g~~i~v~Hg~~~~~~~ 90 (155)
T cd00841 61 -D-----FPILPE---------EAVLEIG-----------------------------------GKRIFLTHGHLYGVKN 90 (155)
T ss_pred -C-----cccCCc---------eEEEEEC-----------------------------------CEEEEEECCccccccc
Confidence 0 001121 1111111 1368888887654321
Q ss_pred CCCCCcHHHHHHHHHHHHhcCCcEEEecccccceeeecccCCCcCCCCcEEEEECCCCC
Q 012895 308 AHQGEGESMRNSMEELLYNARVDVVFAGHVHAYERFTRIYDNKADPCGPIYITIGDGGN 366 (454)
Q Consensus 308 ~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~y~r~~~~~~~~~~~~g~~yi~~G~gG~ 366 (454)
. . .. ..++.+.++|++++||+|...... .+++.++..|+-|.
T Consensus 91 ~-------~-~~-~~~~~~~~~d~vi~GHtH~~~~~~--------~~~~~~inpGs~~~ 132 (155)
T cd00841 91 G-------L-DR-LYLAKEGGADVVLYGHTHIPVIEK--------IGGVLLLNPGSLSL 132 (155)
T ss_pred c-------h-hh-hhhhhhcCCCEEEECcccCCccEE--------ECCEEEEeCCCccC
Confidence 1 1 11 445677889999999999854332 24677887777654
No 46
>TIGR01854 lipid_A_lpxH UDP-2,3-diacylglucosamine hydrolase. This model represents LpxH, UDP-2,3-diacylglucosamine hydrolase, and essential enzyme in E. coli that catalyzes the fourth step in lipid A biosynthesis. Note that Pseudomonas aeruginosa has both a member of this family that shares this function and a more distant homolog, designated LpxH2, that does not. Many species that produce lipid A lack an lpxH gene in this family; some of those species have an lpxH2 gene instead, although for which the function is unknown.
Probab=99.10 E-value=2.8e-09 Score=99.76 Aligned_cols=69 Identities=20% Similarity=0.218 Sum_probs=47.5
Q ss_pred EEEecCCCCCCh----HHHHHHhhc--CCCCeEeecCccccCC----CChhhHHHHhhhhhhhhcC-CCeeecCCCcccC
Q 012895 151 AIVGDLGQTEWT----NSTLDHVGS--KDYDVFLLPGDLSYAD----FQQPLWDSFGRLVEPYASS-RPWMVTEGNHEIE 219 (454)
Q Consensus 151 ~~igD~~~~~~~----~~~l~~i~~--~~pd~vl~~GDl~y~~----~~~~~~~~~~~~~~~l~~~-~P~~~v~GNHD~~ 219 (454)
+++||+|.+... +..++.+.+ .+||+|+++||+++.- ......+.+.+.++.+... .|+++++||||..
T Consensus 2 ~~iSDlHl~~~~~~~~~~~l~~l~~~~~~~d~lii~GDi~d~~~~~~~~~~~~~~~~~~l~~L~~~~~~v~~v~GNHD~~ 81 (231)
T TIGR01854 2 LFISDLHLSPERPDITALFLDFLREEARKADALYILGDLFEAWIGDDDPSTLARSVAQAIRQVSDQGVPCYFMHGNRDFL 81 (231)
T ss_pred eEEEecCCCCCChhHHHHHHHHHHhhhccCCEEEEcCceeccccCCCCCCHHHHHHHHHHHHHHHCCCeEEEEcCCCchh
Confidence 689999987542 345555543 3899999999999731 1222234455566666653 8999999999983
No 47
>cd07394 MPP_Vps29 Homo sapiens Vps29 and related proteins, metallophosphatase domain. Vps29 (vacuolar sorting protein 29), also known as vacuolar membrane protein Pep11, is a subunit of the retromer complex which is responsible for the retrieval of mannose-6-phosphate receptors (MPRs) from the endosomes for retrograde transport back to the Golgi. Vps29 has a phosphoesterase fold that acts as a protein interaction scaffold for retromer complex assembly as well as a phosphatase with specificity for the cytoplasmic tail of the MPR. The retromer includes the following 5 subunits: Vps35, Vps26, Vps29, and a dimer of the sorting nexins Vps5 (Snx1), and Vps17 (Snx2). Vps29 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily incl
Probab=99.09 E-value=1.7e-08 Score=90.37 Aligned_cols=166 Identities=16% Similarity=0.205 Sum_probs=95.8
Q ss_pred EEEEEecCCCCCChH----HHHHHhhcCCCCeEeecCccccCCCChhhHHHHhhhhhhhhcCCCeeecCCCcccCCCCCC
Q 012895 149 EFAIVGDLGQTEWTN----STLDHVGSKDYDVFLLPGDLSYADFQQPLWDSFGRLVEPYASSRPWMVTEGNHEIESIPII 224 (454)
Q Consensus 149 ~f~~igD~~~~~~~~----~~l~~i~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~~ 224 (454)
+++++||+|...... .+++.++..++|.|+++||+++ ... .+.++.+ ..|++.|.||||..
T Consensus 1 ~i~viSDtHl~~~~~~~~~~~~~~~~~~~~d~iih~GDi~~----~~~----~~~l~~~--~~~~~~V~GN~D~~----- 65 (178)
T cd07394 1 LVLVIGDLHIPHRASDLPAKFKKLLVPGKIQHVLCTGNLCS----KET----YDYLKTI--APDVHIVRGDFDEN----- 65 (178)
T ss_pred CEEEEEecCCCCCchhhHHHHHHHhccCCCCEEEECCCCCC----HHH----HHHHHhh--CCceEEEECCCCcc-----
Confidence 478999999543321 3444454578999999999975 111 2223333 24799999999972
Q ss_pred CcchhhhhhhhccCCCCCCCCCCCceEEEEeCeEEEEEecccCCCCCCHHHHHHHHHHHHhhccCCCCeEEEEEcccccc
Q 012895 225 LPHAFKAYNARWLMPYEESGSSSNLYYSFDIAGAHIIMLGSYTDFDEDSAQYKWLKADLAKINRKKTPWIFVLLHAPWYN 304 (454)
Q Consensus 225 ~~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~Lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~~ 304 (454)
+.+|. ...+++++ ++|.++|--.+.
T Consensus 66 -----------~~lp~---------~~~~~~~g-----------------------------------~~i~l~HG~~~~ 90 (178)
T cd07394 66 -----------LNYPE---------TKVITVGQ-----------------------------------FKIGLIHGHQVV 90 (178)
T ss_pred -----------ccCCC---------cEEEEECC-----------------------------------EEEEEEECCcCC
Confidence 02232 11222222 256666642221
Q ss_pred CCCCCCCCcHHHHHHHHHHHHhcCCcEEEecccccceeeecccCCCcCCCCcEEEEECCCCCCCCcccccCCCCCCCcee
Q 012895 305 TNTAHQGEGESMRNSMEELLYNARVDVVFAGHVHAYERFTRIYDNKADPCGPIYITIGDGGNREGLALEFKEPKSPLSMF 384 (454)
Q Consensus 305 ~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~y~r~~~~~~~~~~~~g~~yi~~G~gG~~~~~~~~~~~~~p~~~~~ 384 (454)
.. . ..+.+..++++.++|++++||+|...... .+|.+++..|+-|.+.+. .. .
T Consensus 91 ~~-----~---~~~~~~~~~~~~~~dvii~GHTH~p~~~~--------~~g~~viNPGSv~~~~~~---~~-~------- 143 (178)
T cd07394 91 PW-----G---DPDSLAALQRQLDVDILISGHTHKFEAFE--------HEGKFFINPGSATGAFSP---LD-P------- 143 (178)
T ss_pred CC-----C---CHHHHHHHHHhcCCCEEEECCCCcceEEE--------ECCEEEEECCCCCCCCCC---CC-C-------
Confidence 11 0 12345556677889999999999854433 147778888876543110 00 0
Q ss_pred eecccCEEEEEEecCCeEEEEEEEecCCC
Q 012895 385 QESSFGHARLKILDETRAHWSWYRNNDSD 413 (454)
Q Consensus 385 ~~~~~G~~~l~v~~~~~~~~~~~~~~dg~ 413 (454)
.....|..|++. .....+++++..+++
T Consensus 144 -~~~~syail~~~-~~~~~~~~~~l~~~~ 170 (178)
T cd07394 144 -NVIPSFVLMDIQ-GSKVVTYVYQLIDGE 170 (178)
T ss_pred -CCCCeEEEEEec-CCeEEEEEEEEECCc
Confidence 011256777764 346777888775554
No 48
>PF14582 Metallophos_3: Metallophosphoesterase, calcineurin superfamily; PDB: 1UF3_B 2YVT_A.
Probab=99.07 E-value=1.1e-09 Score=98.08 Aligned_cols=174 Identities=16% Similarity=0.197 Sum_probs=88.8
Q ss_pred CeEEEEEecCCCCCC-hHHHHHHhhcCCCCeEeecCccccCCCChhhHH--------------------------HHhhh
Q 012895 147 PIEFAIVGDLGQTEW-TNSTLDHVGSKDYDVFLLPGDLSYADFQQPLWD--------------------------SFGRL 199 (454)
Q Consensus 147 ~~~f~~igD~~~~~~-~~~~l~~i~~~~pd~vl~~GDl~y~~~~~~~~~--------------------------~~~~~ 199 (454)
+-+++.++|.+.... ..+++..+...+||+|+++||+.-......+|. .|++.
T Consensus 5 ~~kilA~s~~~g~~e~l~~l~~~~~e~~~D~~v~~G~~~~~~a~~~e~~~a~~~~r~p~k~~i~~e~~~~~e~~~~ff~~ 84 (255)
T PF14582_consen 5 VRKILAISNFRGDFELLERLVEVIPEKGPDAVVFVGDLLKAEARSDEYERAQEEQREPDKSEINEEECYDSEALDKFFRI 84 (255)
T ss_dssp --EEEEEE--TT-HHHHHHHHHHHHHHT-SEEEEES-SS-TCHHHHHHHHHHHTT----THHHHHHHHHHHHHHHHHHHH
T ss_pred chhheeecCcchHHHHHHHHHhhccccCCCEEEEeccccccchhhhHHHHHhhhccCcchhhhhhhhhhhHHHHHHHHHH
Confidence 347899999875432 234556666789999999999987655555555 44444
Q ss_pred hhhhhcCCCeeecCCCcccCCCCCCCcchhhhhhhhcc----CCCCCCCCCCCceEEEEeCeEEEEEecccC-CCC--C-
Q 012895 200 VEPYASSRPWMVTEGNHEIESIPIILPHAFKAYNARWL----MPYEESGSSSNLYYSFDIAGAHIIMLGSYT-DFD--E- 271 (454)
Q Consensus 200 ~~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~~----~p~~~~~~~~~~~ys~~~g~v~fi~Lds~~-~~~--~- 271 (454)
+..+ .+|++++|||||... ...+++-+. .|.-. . -...+.+.-|...|+++.... +.. .
T Consensus 85 L~~~--~~p~~~vPG~~Dap~--------~~~lr~a~~~e~v~p~~~-~--vH~sf~~~~g~y~v~G~GGeI~~~~~~~~ 151 (255)
T PF14582_consen 85 LGEL--GVPVFVVPGNMDAPE--------RFFLREAYNAEIVTPHIH-N--VHESFFFWKGEYLVAGMGGEITDDQREEE 151 (255)
T ss_dssp HHCC---SEEEEE--TTS-SH--------HHHHHHHHHCCCC-TTEE-E---CTCEEEETTTEEEEEE-SEEESSS-BCS
T ss_pred HHhc--CCcEEEecCCCCchH--------HHHHHHHhccceecccee-e--eeeeecccCCcEEEEecCccccCCCcccc
Confidence 4443 399999999999831 111222221 12100 0 011122333447777775421 110 0
Q ss_pred -----CHHHHHHHHHHHHhhccCCCCeEEEEEcccc-ccCCCCCCCCcHHHHHHHHHHHHhcCCcEEEecccccce
Q 012895 272 -----DSAQYKWLKADLAKINRKKTPWIFVLLHAPW-YNTNTAHQGEGESMRNSMEELLYNARVDVVFAGHVHAYE 341 (454)
Q Consensus 272 -----~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~-~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~y~ 341 (454)
.....+|..+.|...+ ..-+|++.|.|+ +..+..+ ...+.+..++++++.++++|||+|.-.
T Consensus 152 ~~LrYP~weaey~lk~l~elk---~~r~IlLfhtpPd~~kg~~h-----~GS~~V~dlIk~~~P~ivl~Ghihe~~ 219 (255)
T PF14582_consen 152 FKLRYPAWEAEYSLKFLRELK---DYRKILLFHTPPDLHKGLIH-----VGSAAVRDLIKTYNPDIVLCGHIHESH 219 (255)
T ss_dssp SS-EEEHHHHHHHHGGGGGCT---SSEEEEEESS-BTBCTCTBT-----TSBHHHHHHHHHH--SEEEE-SSS-EE
T ss_pred ccccchHHHHHHHHHHHHhcc---cccEEEEEecCCccCCCccc-----ccHHHHHHHHHhcCCcEEEecccccch
Confidence 1223344445555543 223788899999 3332222 234688899999999999999999754
No 49
>TIGR00583 mre11 DNA repair protein (mre11). All proteins in this family for which functions are known are subunits of a nuclease complex made up of multiple proteins including MRE11 and RAD50 homologs. The functions of this nuclease complex include recombinational repair and non-homolgous end joining. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). The proteins in this family are distantly related to proteins in the SbcCD complex of bacteria.
Probab=99.06 E-value=1.1e-08 Score=102.49 Aligned_cols=243 Identities=14% Similarity=0.090 Sum_probs=120.7
Q ss_pred CCeEEEEEecCCCCCCh-------------HHHHHHhhcCCCCeEeecCccccCCCCh-hhHHHHhhhhhh---------
Q 012895 146 FPIEFAIVGDLGQTEWT-------------NSTLDHVGSKDYDVFLLPGDLSYADFQQ-PLWDSFGRLVEP--------- 202 (454)
Q Consensus 146 ~~~~f~~igD~~~~~~~-------------~~~l~~i~~~~pd~vl~~GDl~y~~~~~-~~~~~~~~~~~~--------- 202 (454)
+.+||++++|+|.+... .++++.+.+.++|+||++||+.+...+. .....+.+.+++
T Consensus 2 ~~mKIlh~SD~HlG~~~~~~~r~~D~~~~f~eil~~a~~~~vD~VLiaGDLFd~~~Ps~~~~~~~~~~lr~~~~g~~p~~ 81 (405)
T TIGR00583 2 DTIRILVSTDNHVGYGENDPVRGDDSWNTFEEVLQIAKEQDVDMILLGGDLFHENKPSRKSLYQVLRSLRLYCLGDKPCE 81 (405)
T ss_pred CceEEEEEcCCCCCCccCCchhhhhHHHHHHHHHHHHHHcCCCEEEECCccCCCCCCCHHHHHHHHHHHHHhhccCCccc
Confidence 56999999999986321 2344455688999999999999876542 111222223322
Q ss_pred ------------------h-------hcCCCeeecCCCcccCCCCCCCcchhhhhhh------hccCCCCCCCCCCCc--
Q 012895 203 ------------------Y-------ASSRPWMVTEGNHEIESIPIILPHAFKAYNA------RWLMPYEESGSSSNL-- 249 (454)
Q Consensus 203 ------------------l-------~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~------~~~~p~~~~~~~~~~-- 249 (454)
+ ...+|+|++.||||....... ........ .|.... . ....
T Consensus 82 ~~~Lsd~~~~~~~~~~~~~ny~d~~~~~~iPVf~I~GNHD~p~~~~~--~~~l~lL~~~Glvnifgk~~---~-~~~i~~ 155 (405)
T TIGR00583 82 LEFLSDASVVFNQSAFGNVNYEDPNINVAIPVFSIHGNHDDPSGDGL--LCALDLLHATGLVNYFGKVP---E-IDNIIV 155 (405)
T ss_pred hhhccchhhhcccccccccccccccccCCCCEEEEcCCCCCcccccc--ccHHHHHHhCCCEEEecccc---c-ccccee
Confidence 0 125899999999998532110 00001111 111000 0 0000
Q ss_pred -eEEEEeCe--EEEEEecccCCCCCCHHHH--HHHHHHHHhhcc---CCCCeEEEEEccccccCCCCCCCCcHHHHHHHH
Q 012895 250 -YYSFDIAG--AHIIMLGSYTDFDEDSAQY--KWLKADLAKINR---KKTPWIFVLLHAPWYNTNTAHQGEGESMRNSME 321 (454)
Q Consensus 250 -~ys~~~g~--v~fi~Lds~~~~~~~~~Q~--~WL~~~L~~~~~---~~~~w~Iv~~H~P~~~~~~~~~~~~~~~~~~l~ 321 (454)
.-.+.-|+ +.+.+|.... .+.+ .|-+..+..... ....+.|++.|......... .. ..+
T Consensus 156 ~Pvll~kg~~~valyGl~~~~-----d~rl~~~f~~~~v~~~~p~~~~~~~fnIlv~Hq~~~~~~~~-----~~---ipe 222 (405)
T TIGR00583 156 SPILLQKGETKLALYGISNVR-----DERLVRTFKDNKVSFLRPNAGAEDWFNLLVLHQNHAAHTST-----SF---LPE 222 (405)
T ss_pred eeEEEecCCeeEEEecCCCCC-----HHHHHHHhhccchhhhccccCCCCceEEEEeCceecCCCCc-----cc---Cch
Confidence 01112222 4445544221 1111 121111111111 12235899999886322111 00 112
Q ss_pred HHHHhcCCcEEEecccccceeeecccCCCcCCCCcEEEEECCCCCCCCcccccCCCCCCCceeeecccCEEEEEEecCCe
Q 012895 322 ELLYNARVDVVFAGHVHAYERFTRIYDNKADPCGPIYITIGDGGNREGLALEFKEPKSPLSMFQESSFGHARLKILDETR 401 (454)
Q Consensus 322 ~ll~~~~v~lvl~GH~H~y~r~~~~~~~~~~~~g~~yi~~G~gG~~~~~~~~~~~~~p~~~~~~~~~~G~~~l~v~~~~~ 401 (454)
.++ ..++|+|+.||.|..+.. +.. .+....+|. -+ |+..+ ..+... ....-|+..|+|. +..
T Consensus 223 ~ll-p~~fDYValGHiH~~~~~-p~~----~~~~~~~V~-yp-GS~v~--tSf~e~-------E~~~Kgv~lVeI~-~~~ 284 (405)
T TIGR00583 223 SFI-PDFFDLVIWGHEHECLPD-PVY----NPSDGFYVL-QP-GSTVA--TSLTPG-------EALPKHVFILNIK-GRK 284 (405)
T ss_pred hhh-hccCcEEEeccccccccc-ccc----cCCCCceEE-EC-CCccc--cccccc-------ccCCCEEEEEEEc-CCe
Confidence 333 346999999999985432 111 111222332 22 22221 122210 0122377888885 457
Q ss_pred EEEEEEEecCCCceeeeEEEEEEc
Q 012895 402 AHWSWYRNNDSDAVIADEVRLESL 425 (454)
Q Consensus 402 ~~~~~~~~~dg~~~~~D~~~i~~~ 425 (454)
..++++....-...+..++.+...
T Consensus 285 ~~~~~IpL~~vRpf~~~~i~l~~~ 308 (405)
T TIGR00583 285 FASKPIPLQTVRPFVMKEILLDKV 308 (405)
T ss_pred eEEEEeeCCCcccEEEEEEEhhhc
Confidence 888999987777777888877765
No 50
>TIGR00040 yfcE phosphoesterase, MJ0936 family. Members of this largely uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11, and a family of uncharacterized archaeal putative phosphoesterases described by TIGR00024. In this family, the His residue in GNHD portion of the motif is not conserved. The member MJ0936, one of two from Methanococcus jannaschii, was shown (PubMed:15128743) to act on model phosphodiesterase substrates; a divalent cation was required.
Probab=98.98 E-value=5.2e-09 Score=91.98 Aligned_cols=61 Identities=13% Similarity=0.210 Sum_probs=42.3
Q ss_pred eEEEEEecCCCCCCh-HHHHHHhhcC-CCCeEeecCccccCCCChhhHHHHhhhhhhhhcCCCeeecCCCccc
Q 012895 148 IEFAIVGDLGQTEWT-NSTLDHVGSK-DYDVFLLPGDLSYADFQQPLWDSFGRLVEPYASSRPWMVTEGNHEI 218 (454)
Q Consensus 148 ~~f~~igD~~~~~~~-~~~l~~i~~~-~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~ 218 (454)
+|++++||+|..... +..++.++.. ++|.|+++||++. . ...+.++.+ ..|++++.||||.
T Consensus 1 m~i~viSD~H~~~~~~~~~~~~~~~~~~~d~ii~~GD~~~----~----~~~~~l~~~--~~~~~~V~GN~D~ 63 (158)
T TIGR00040 1 MKILVISDTHGPLRATELPVELFNLESNVDLVIHAGDLTS----P----FVLKEFEDL--AAKVIAVRGNNDG 63 (158)
T ss_pred CEEEEEecccCCcchhHhHHHHHhhccCCCEEEEcCCCCC----H----HHHHHHHHh--CCceEEEccCCCc
Confidence 589999999975433 3344555555 8999999999972 1 122233322 3589999999997
No 51
>cd00845 MPP_UshA_N_like Escherichia coli UshA-like family, N-terminal metallophosphatase domain. This family includes the bacterial enzyme UshA, and related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich
Probab=98.98 E-value=7.7e-09 Score=98.20 Aligned_cols=175 Identities=15% Similarity=0.097 Sum_probs=92.8
Q ss_pred eEEEEEecCCCCC------Ch----HHHHHHhhcCCCC-eEeecCccccCCCChhhHHHHhhhhhhhhcCCCeeecCCCc
Q 012895 148 IEFAIVGDLGQTE------WT----NSTLDHVGSKDYD-VFLLPGDLSYADFQQPLWDSFGRLVEPYASSRPWMVTEGNH 216 (454)
Q Consensus 148 ~~f~~igD~~~~~------~~----~~~l~~i~~~~pd-~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNH 216 (454)
++|++++|+|... .. ...++++++.+|| +++.+||++....... +......++.+...-.-++++|||
T Consensus 1 l~i~~~sD~hg~~~~~~~~~g~~~l~~~v~~~~~~~~~~l~v~~GD~~~~~~~~~-~~~~~~~~~~l~~~g~d~~~~GNH 79 (252)
T cd00845 1 LTILHTNDLHGHFEPAGGVGGAARLATLIKEERAENENTLLLDAGDNFDGSPPST-ATKGEANIELMNALGYDAVTIGNH 79 (252)
T ss_pred CEEEEecccccCccccCCcCCHHHHHHHHHHHHhcCCCeEEEeCCccCCCccchh-ccCCcHHHHHHHhcCCCEEeeccc
Confidence 5899999999543 11 3566777777888 7789999987654421 212222333333333556788999
Q ss_pred ccCCCCCCCcchhhhhhhhccCCCCC---------C-CCCCCceEEEEeCeEE--EEEecccCCCC----------CCHH
Q 012895 217 EIESIPIILPHAFKAYNARWLMPYEE---------S-GSSSNLYYSFDIAGAH--IIMLGSYTDFD----------EDSA 274 (454)
Q Consensus 217 D~~~~~~~~~~~~~~~~~~~~~p~~~---------~-~~~~~~~ys~~~g~v~--fi~Lds~~~~~----------~~~~ 274 (454)
|+..... .+....+....|.-. . ......|..++.++++ |+++.+..... ....
T Consensus 80 e~d~g~~----~l~~~~~~~~~~~l~aNv~~~~~~~~~~~~~~~~i~~~~g~kIgiiG~~~~~~~~~~~~~~~~~~~~~~ 155 (252)
T cd00845 80 EFDYGLD----ALAELYKDANFPVLSANLYDKDTGTGPPWAKPYKIIEVDGVKIGVIGLTTPDTPTYTPLGWIIGLPFED 155 (252)
T ss_pred cccccHH----HHHHHHHhCCCCEEEEeeeccCCCCCCCCcCCeEEEEECCEEEEEEEeccccceeecCCCcccCceecC
Confidence 9854321 233222222222100 0 0011235567778754 55554321100 0011
Q ss_pred HHHHHHHHHHhhccCCCCeEEEEEccccccCCCCCCCCcHHHHHHHHHHHHhcCCcEEEeccccccee
Q 012895 275 QYKWLKADLAKINRKKTPWIFVLLHAPWYNTNTAHQGEGESMRNSMEELLYNARVDVVFAGHVHAYER 342 (454)
Q Consensus 275 Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~y~r 342 (454)
..+.+++..++. +++...+|++.|.|... ...+.+.+ .++|++|+||.|....
T Consensus 156 ~~~~~~~~~~~~-~~~~D~vIvl~H~g~~~------------~~~la~~~--~giDlvlggH~H~~~~ 208 (252)
T cd00845 156 LAEAVAVAEELL-AEGADVIILLSHLGLDD------------DEELAEEV--PGIDVILGGHTHHLLE 208 (252)
T ss_pred HHHHHHHHHHHH-hCCCCEEEEEeccCccc------------hHHHHhcC--CCccEEEcCCcCcccC
Confidence 223343322222 23667899999987532 11222222 5899999999998653
No 52
>PRK09453 phosphodiesterase; Provisional
Probab=98.97 E-value=2.9e-08 Score=89.39 Aligned_cols=69 Identities=14% Similarity=0.225 Sum_probs=45.9
Q ss_pred eEEEEEecCCCCCCh-HHHHHHhhcCCCCeEeecCccccCCCCh---h--hHHHHhhhhhhhhcCCCeeecCCCccc
Q 012895 148 IEFAIVGDLGQTEWT-NSTLDHVGSKDYDVFLLPGDLSYADFQQ---P--LWDSFGRLVEPYASSRPWMVTEGNHEI 218 (454)
Q Consensus 148 ~~f~~igD~~~~~~~-~~~l~~i~~~~pd~vl~~GDl~y~~~~~---~--~~~~~~~~~~~l~~~~P~~~v~GNHD~ 218 (454)
+|++++||+|..... +++++.+++.++|.|+++||+++.+... . ..+...+.++.+ ..+++++.||||.
T Consensus 1 mri~viSD~Hg~~~~~~~~l~~~~~~~~d~ii~lGDi~~~~~~~~~~~~~~~~~~~~~l~~~--~~~v~~V~GNhD~ 75 (182)
T PRK09453 1 MKLMFASDTHGSLPATEKALELFAQSGADWLVHLGDVLYHGPRNPLPEGYAPKKVAELLNAY--ADKIIAVRGNCDS 75 (182)
T ss_pred CeEEEEEeccCCHHHHHHHHHHHHhcCCCEEEEcccccccCcCCCCccccCHHHHHHHHHhc--CCceEEEccCCcc
Confidence 589999999965322 3455666678999999999998643210 0 112223333322 2589999999997
No 53
>cd07403 MPP_TTHA0053 Thermus thermophilus TTHA0053 and related proteins, metallophosphatase domain. TTHA0053 is an uncharacterized Thermus thermophilus protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=98.95 E-value=3.3e-09 Score=89.80 Aligned_cols=103 Identities=17% Similarity=0.213 Sum_probs=68.6
Q ss_pred EEEecCCCCCChHHHHHHh--hcCCCCeEeecCccccCCCChhhHHHHhhhhhhhhcCCCeeecCCCcccCCCCCCCcch
Q 012895 151 AIVGDLGQTEWTNSTLDHV--GSKDYDVFLLPGDLSYADFQQPLWDSFGRLVEPYASSRPWMVTEGNHEIESIPIILPHA 228 (454)
Q Consensus 151 ~~igD~~~~~~~~~~l~~i--~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~~~~~~ 228 (454)
+++||+|.. ...+..+ ...++|+++++||+.. ... +.++.+ ...|++++.||||
T Consensus 1 ~viSDtH~~---~~~~~~~~~~~~~~d~ii~~GD~~~-----~~~----~~~~~~-~~~~~~~V~GN~D----------- 56 (129)
T cd07403 1 LVISDTESP---ALYSPEIKVRLEGVDLILSAGDLPK-----EYL----EYLVTM-LNVPVYYVHGNHD----------- 56 (129)
T ss_pred CeeccccCc---cccchHHHhhCCCCCEEEECCCCCh-----HHH----HHHHHH-cCCCEEEEeCCCc-----------
Confidence 479999944 2233333 2578999999999842 111 222222 2468999999999
Q ss_pred hhhhhhhccCCCCCCCCCCCceEEEEeCeEEEEEecccCCCCCCHHHHHHHHHHHHhhccCCCCeEEEEEccccccCCCC
Q 012895 229 FKAYNARWLMPYEESGSSSNLYYSFDIAGAHIIMLGSYTDFDEDSAQYKWLKADLAKINRKKTPWIFVLLHAPWYNTNTA 308 (454)
Q Consensus 229 ~~~~~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~Lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~~~~ 308 (454)
.+|+++|+|++.....
T Consensus 57 ----------------------------------------------------------------~~Ilv~H~pp~~~~~~ 72 (129)
T cd07403 57 ----------------------------------------------------------------VDILLTHAPPAGIGDG 72 (129)
T ss_pred ----------------------------------------------------------------cCEEEECCCCCcCcCc
Confidence 2588899988654321
Q ss_pred CCCCcHHHHHHHHHHHHhcCCcEEEeccccccee
Q 012895 309 HQGEGESMRNSMEELLYNARVDVVFAGHVHAYER 342 (454)
Q Consensus 309 ~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~y~r 342 (454)
.. ......+.+.+++.+++++++|+||+|....
T Consensus 73 ~~-~~~~g~~~l~~~l~~~~~~~vl~GH~H~~~~ 105 (129)
T cd07403 73 ED-FAHRGFEAFLDFIDRFRPKLFIHGHTHLNYG 105 (129)
T ss_pred cc-ccccCHHHHHHHHHHHCCcEEEEcCcCCCcC
Confidence 11 1112356778888999999999999997444
No 54
>cd08164 MPP_Ted1 Saccharomyces cerevisiae Ted1 and related proteins, metallophosphatase domain. Saccharomyces cerevisiae Ted1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1) is a metallophosphatase domain-containing protein which acts together with Emp24p and Erv25p in cargo exit from the ER. Ted1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the
Probab=98.86 E-value=8.3e-09 Score=92.34 Aligned_cols=57 Identities=16% Similarity=0.256 Sum_probs=35.3
Q ss_pred HHHHHhh-cCCCCeEeecCccccCCCC-hhhHHH-Hhhhhhhhh-------------------cCCCeeecCCCcccCC
Q 012895 164 STLDHVG-SKDYDVFLLPGDLSYADFQ-QPLWDS-FGRLVEPYA-------------------SSRPWMVTEGNHEIES 220 (454)
Q Consensus 164 ~~l~~i~-~~~pd~vl~~GDl~y~~~~-~~~~~~-~~~~~~~l~-------------------~~~P~~~v~GNHD~~~ 220 (454)
.+++.+. ..+||.|+++||+++..-. +.+|.. +.++.+.+. ..+|++.++||||+..
T Consensus 34 ~~~~~~~~~l~Pd~V~fLGDLfd~~w~~D~ef~~~~~RF~~if~~~~~~~~~~~~~~~~~~~~~~i~~i~V~GNHDIG~ 112 (193)
T cd08164 34 HIVSMMQFWLKPDAVVVLGDLFSSQWIDDEEFAKRADRYRRRFFGRNDWQVGNISLAARTFEDGKTPLINIAGNHDVGY 112 (193)
T ss_pred HHHHHHHHhcCCCEEEEeccccCCCcccHHHHHHHHHHHHHHhcCCcccccccccccccccccCCceEEEECCcccCCC
Confidence 3444443 6799999999999965311 334422 222222221 1388999999999954
No 55
>PHA02546 47 endonuclease subunit; Provisional
Probab=98.85 E-value=2.4e-07 Score=91.77 Aligned_cols=72 Identities=11% Similarity=0.153 Sum_probs=48.3
Q ss_pred eEEEEEecCCCCCCh-------------HHHHHHhhcCCCCeEeecCccccCCCC-h-hhHHHHhh-hhhhhhc-CCCee
Q 012895 148 IEFAIVGDLGQTEWT-------------NSTLDHVGSKDYDVFLLPGDLSYADFQ-Q-PLWDSFGR-LVEPYAS-SRPWM 210 (454)
Q Consensus 148 ~~f~~igD~~~~~~~-------------~~~l~~i~~~~pd~vl~~GDl~y~~~~-~-~~~~~~~~-~~~~l~~-~~P~~ 210 (454)
+||+++||+|.+... .++++.+.+.+||+||++||+++.... . .......+ +++.+.. .+|++
T Consensus 1 MKilhiSD~HLG~~~~~~~~~~~~~~~l~~ii~~a~~~~vD~VliaGDlfD~~~~~~~~~~~~~~~~l~~~L~~~gi~v~ 80 (340)
T PHA02546 1 MKILLIGDQHLGVRKDDPWFQNYQLKFIKQAIEYSKAHGITTWIQLGDTFDVRKAITQNTMNFVREKIFDLLKEAGITLH 80 (340)
T ss_pred CeEEEEeeecCCCcCCChhhHHHHHHHHHHHHHHHHHcCCCEEEECCcccCCCCCCCHHHHHHHHHHHHHHHHHCCCeEE
Confidence 689999999986432 123444458899999999999976422 1 22222222 2444433 58999
Q ss_pred ecCCCcccC
Q 012895 211 VTEGNHEIE 219 (454)
Q Consensus 211 ~v~GNHD~~ 219 (454)
+++||||..
T Consensus 81 ~I~GNHD~~ 89 (340)
T PHA02546 81 VLVGNHDMY 89 (340)
T ss_pred EEccCCCcc
Confidence 999999984
No 56
>cd07406 MPP_CG11883_N Drosophila melanogaster CG11883 and related proteins, N-terminal metallophosphatase domain. CG11883 is an uncharacterized Drosophila melanogaster UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at th
Probab=98.85 E-value=5e-08 Score=92.80 Aligned_cols=175 Identities=14% Similarity=0.148 Sum_probs=91.6
Q ss_pred eEEEEEecCCCCCC-----------hHHHHHHhhcCCCC-eEeecCccccCCCChhhHHHHhhhhhhhhcCCCeeecCCC
Q 012895 148 IEFAIVGDLGQTEW-----------TNSTLDHVGSKDYD-VFLLPGDLSYADFQQPLWDSFGRLVEPYASSRPWMVTEGN 215 (454)
Q Consensus 148 ~~f~~igD~~~~~~-----------~~~~l~~i~~~~pd-~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~~~P~~~v~GN 215 (454)
+++++++|+|.-.. ....++++++.+++ ++|.+||++...... .+..-...++.+..--.-+.++||
T Consensus 1 ~~il~~nd~~~~~~~~~~~~gG~~rl~~~i~~~r~~~~~~l~l~~GD~~~g~~~~-~~~~g~~~~~~l~~l~~d~~~~GN 79 (257)
T cd07406 1 FTILHFNDVYEIAPLDGGPVGGAARFATLRKQLRKENPNTLVLFSGDVLSPSLLS-TATKGKQMVPVLNALGVDLACFGN 79 (257)
T ss_pred CeEEEEccceeecccCCCCcCCHHHHHHHHHHHHhcCCCEEEEECCCccCCccch-hhcCCccHHHHHHhcCCcEEeecc
Confidence 57889999873111 12456666667788 899999998654321 111111222222222234668999
Q ss_pred cccCCCCCCCcchhhhhhhhccCCCCC------CC-C---CCCceEEEEeCeEE--EEEecccCCC------CC---CHH
Q 012895 216 HEIESIPIILPHAFKAYNARWLMPYEE------SG-S---SSNLYYSFDIAGAH--IIMLGSYTDF------DE---DSA 274 (454)
Q Consensus 216 HD~~~~~~~~~~~~~~~~~~~~~p~~~------~~-~---~~~~~ys~~~g~v~--fi~Lds~~~~------~~---~~~ 274 (454)
||+..... .+.........|.-. .+ . .-..|.-++.++++ |+++.+.... .. ...
T Consensus 80 Hefd~g~~----~l~~~~~~~~~~~L~aNi~~~~~~~~~~~~~~~~i~~~~g~kIgviG~~~~~~~~~~~~~~~~~~~~d 155 (257)
T cd07406 80 HEFDFGED----QLQKRLGESKFPWLSSNVFDATGGGPLPNGKESAIIERAGVKIGLLGLVEEEWLETLTIDPEYVRYRD 155 (257)
T ss_pred cccccCHH----HHHHHHhhCCCCEEEEEEEECCCCcccCCCCCeEEEEECCeEEEEEEEecccccccccCCCCcceEcC
Confidence 99954321 222222222222110 00 0 12457778888855 5555432110 00 122
Q ss_pred HHHHHHHHHHhhccCCCCeEEEEEccccccCCCCCCCCcHHHHHHHHHHHHhcCCcEEEecccccce
Q 012895 275 QYKWLKADLAKINRKKTPWIFVLLHAPWYNTNTAHQGEGESMRNSMEELLYNARVDVVFAGHVHAYE 341 (454)
Q Consensus 275 Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~y~ 341 (454)
-.+.+++.+++..+++.+.+|++.|.+... . ..+.+.+ .++|++|+||.|..+
T Consensus 156 ~~~~~~~~v~~~~~~~~D~iVvl~H~g~~~--------d----~~la~~~--~~iD~IlgGH~H~~~ 208 (257)
T cd07406 156 YVETARELVDELREQGADLIIALTHMRLPN--------D----KRLAREV--PEIDLILGGHDHEYI 208 (257)
T ss_pred HHHHHHHHHHHHHhCCCCEEEEEeccCchh--------h----HHHHHhC--CCCceEEecccceeE
Confidence 234444444333334678899999987421 0 1222222 479999999999865
No 57
>cd07410 MPP_CpdB_N Escherichia coli CpdB and related proteins, N-terminal metallophosphatase domain. CpdB is a bacterial periplasmic protein with an N-terminal metallophosphatase domain and a C-terminal 3'-nucleotidase domain. This alignment model represents the N-terminal metallophosphatase domain, which has 2',3'-cyclic phosphodiesterase activity, hydrolyzing the 2',3'-cyclic phosphates of adenosine, guanosine, cytosine and uridine to yield nucleoside and phosphate. CpdB also hydrolyzes the chromogenic substrates p-nitrophenyl phosphate (PNPP), bis(PNPP) and p-nitrophenyl phosphorylcholine (NPPC). CpdB is thought to play a scavenging role during RNA hydrolysis by converting the non-transportable nucleotides produced by RNaseI to nucleosides which can easily enter a cell for use as a carbon source. This family also includes YfkN, a Bacillus subtilis nucleotide phosphoesterase with two copies of each of the metallophosphatase and 3'-nucleotidase domains. The N-terminal metallophos
Probab=98.81 E-value=1.2e-07 Score=91.37 Aligned_cols=182 Identities=15% Similarity=0.124 Sum_probs=93.1
Q ss_pred eEEEEEecCCCCCC-----------------hHHHHHHhhcCCCCeEee-cCccccCCCChhhHH------HHhhhhhhh
Q 012895 148 IEFAIVGDLGQTEW-----------------TNSTLDHVGSKDYDVFLL-PGDLSYADFQQPLWD------SFGRLVEPY 203 (454)
Q Consensus 148 ~~f~~igD~~~~~~-----------------~~~~l~~i~~~~pd~vl~-~GDl~y~~~~~~~~~------~~~~~~~~l 203 (454)
++|++++|+|..-. ....++++++.+|+.+++ +||++..... ..+. .....++.+
T Consensus 1 l~il~t~D~Hg~~~~~~~~~~~~~~~gg~~~l~~~i~~~r~~~~~~l~ld~GD~~~gs~~-~~~~~~~~~~~~~~~~~~l 79 (277)
T cd07410 1 LRILATSDLHGNLLPYDYYTDKPDASGGLARVATLIKKARAENPNTLLIDNGDTIQGSPL-ADYYAKIEDGDPHPMIAAM 79 (277)
T ss_pred CeEEEEeccccceeCccccCCCcCCccCHHHHHHHHHHHHhcCCCeEEEeCCccCCccHH-HHHhhhcccCCCChHHHHH
Confidence 57899999985421 123556666778888877 9999875432 1111 001122222
Q ss_pred hcCCCeeecCCCcccCCCCCCCcchhhhhhhhccCCCC-------CCC-CCCCceEEEEeC-eEEE--EEecccCC--C-
Q 012895 204 ASSRPWMVTEGNHEIESIPIILPHAFKAYNARWLMPYE-------ESG-SSSNLYYSFDIA-GAHI--IMLGSYTD--F- 269 (454)
Q Consensus 204 ~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~p~~-------~~~-~~~~~~ys~~~g-~v~f--i~Lds~~~--~- 269 (454)
..--.-+.++||||+..... .+....+....|.- ..+ .....|.-++.+ ++++ |++-+... +
T Consensus 80 n~~g~d~~~lGNHe~d~g~~----~l~~~~~~~~~~~l~aNv~~~~~~~~~~~~~~i~~~~~g~kVgviG~~~~~~~~~~ 155 (277)
T cd07410 80 NALGYDAGTLGNHEFNYGLD----YLDKVIKQANFPVLSANVIDADTGEPFLKPYVILERDVGVKVGIIGLTTPQIPNWE 155 (277)
T ss_pred HhcCCCEEeecccCcccCHH----HHHHHHHhCCCCEEEEEEEeCCCCCcccCCEEEEEecCCCEEEEEecCCccccccc
Confidence 22233466889999854321 22222222222211 001 112345667888 8554 44433210 0
Q ss_pred ----------CCCHHHHHHHHHHHHhhccCCCCeEEEEEccccccCCCCCCCCcHHHHHHHHHHHHh-cCCcEEEecccc
Q 012895 270 ----------DEDSAQYKWLKADLAKINRKKTPWIFVLLHAPWYNTNTAHQGEGESMRNSMEELLYN-ARVDVVFAGHVH 338 (454)
Q Consensus 270 ----------~~~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~-~~v~lvl~GH~H 338 (454)
....+..++..++|++ ++.+.+|+++|.+........ .. .+.....+.++ .++|++|+||.|
T Consensus 156 ~~~~~~~~~~~d~~~~~~~~v~~lr~---~~~D~IIvl~H~g~~~~~~~~-~~---~~~~~~~la~~~~~vD~IlgGHsH 228 (277)
T cd07410 156 KPNLIGGLKFTDPVETAKKYVPKLRA---EGADVVVVLAHGGFERDLEES-LT---GENAAYELAEEVPGIDAILTGHQH 228 (277)
T ss_pred CcccCCCcEEcCHHHHHHHHHHHHHH---cCCCEEEEEecCCcCCCcccc-cC---CccHHHHHHhcCCCCcEEEeCCCc
Confidence 0011223444444443 356789999998764322100 01 11222334444 589999999999
Q ss_pred cce
Q 012895 339 AYE 341 (454)
Q Consensus 339 ~y~ 341 (454)
...
T Consensus 229 ~~~ 231 (277)
T cd07410 229 RRF 231 (277)
T ss_pred ccc
Confidence 744
No 58
>cd07398 MPP_YbbF-LpxH Escherichia coli YbbF/LpxH and related proteins, metallophosphatase domain. YbbF/LpxH is an Escherichia coli UDP-2,3-diacylglucosamine hydrolase thought to catalyze the fourth step of lipid A biosynthesis, in which a precursor UDP-2,3-diacylglucosamine is hydrolyzed to yield 2,3-diacylglucosamine 1-phosphate and UMP. YbbF belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues l
Probab=98.81 E-value=2.5e-08 Score=92.35 Aligned_cols=188 Identities=18% Similarity=0.208 Sum_probs=93.7
Q ss_pred EEEecCCCCCChH---HHHHHhh-c---CCCCeEeecCccccCCC--C---hhhHHH-HhhhhhhhhcCCCeeecCCCcc
Q 012895 151 AIVGDLGQTEWTN---STLDHVG-S---KDYDVFLLPGDLSYADF--Q---QPLWDS-FGRLVEPYASSRPWMVTEGNHE 217 (454)
Q Consensus 151 ~~igD~~~~~~~~---~~l~~i~-~---~~pd~vl~~GDl~y~~~--~---~~~~~~-~~~~~~~l~~~~P~~~v~GNHD 217 (454)
+++||+|.+.... .....+. . .++|.++++||+++.-. . ...... +..+++.+....++++++||||
T Consensus 1 ~~iSDlHlg~~~~~~~~~~~~~~~~~~~~~~~~lvl~GDi~d~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~~v~GNHD 80 (217)
T cd07398 1 LFISDLHLGDGGPAADFLLLFLLAALALGEADALYLLGDIFDLWFGDDEVVPPAAHEVLAALLRLADRGTRVYYVPGNHD 80 (217)
T ss_pred CEeeeecCCCCCCCHHHHHHHHHhhhccCCCCEEEEeccEEEEEecCCCCCChHHHHHHHHHHHHHHCCCeEEEECCCch
Confidence 4799999875432 2223322 2 59999999999996311 1 111112 2344444455689999999999
Q ss_pred cCCCCCCCcchhhhhhhhccCCCCCCCCCCCceEEEEeCeEEEEEecccCCCCCCHHHHHHHHHHHHhhccCCCCeEEEE
Q 012895 218 IESIPIILPHAFKAYNARWLMPYEESGSSSNLYYSFDIAGAHIIMLGSYTDFDEDSAQYKWLKADLAKINRKKTPWIFVL 297 (454)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~Lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~w~Iv~ 297 (454)
..... .+........ .......+.+++.+++++-... +........|+...+..... .+.++.
T Consensus 81 ~~~~~--------~~~~~~~~~~-----~~~~~~~~~~~g~~~~~~HG~~-~d~~~~~~~~~~~~~~~~~~---~~~~~~ 143 (217)
T cd07398 81 FLLGD--------FFAEELGLIL-----LPDPLVHLELDGKRILLEHGDQ-FDTDDRAYQLLRRLGRNPYD---QLLFLN 143 (217)
T ss_pred HHHHh--------HHHHHcCCEE-----eccceEEEeeCCeEEEEECCCc-CchhHHHHHHHHHHhCcHHH---HHHHhc
Confidence 84211 1111111110 0011215677888888875432 22223333444433211100 000000
Q ss_pred Eccc---------ccc-----CCCCC-CCCcHHHHHHHHHHHHhcCCcEEEecccccceeeecccCCCcCCCCcEEEEEC
Q 012895 298 LHAP---------WYN-----TNTAH-QGEGESMRNSMEELLYNARVDVVFAGHVHAYERFTRIYDNKADPCGPIYITIG 362 (454)
Q Consensus 298 ~H~P---------~~~-----~~~~~-~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~y~r~~~~~~~~~~~~g~~yi~~G 362 (454)
.+.. ... ..... ........+.+.+++.+++++++++||+|....... .+..|+++|
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~GH~H~~~~~~~--------~~~~~~n~G 215 (217)
T cd07398 144 RPLNRRRGIAGGLRWSSRYLKKKVKKAVAIIDVFEEAVARLARRKGVDGVICGHTHRPALHEL--------DGKLYINLG 215 (217)
T ss_pred chHHHHHHHHHhhhhhhHHHHhCccchHHHHHHHHHHHHHHHHhcCCCEEEECCCCCCCeEEE--------CCEEEEECC
Confidence 0000 000 00000 001113455666777889999999999998654431 366777776
Q ss_pred C
Q 012895 363 D 363 (454)
Q Consensus 363 ~ 363 (454)
+
T Consensus 216 ~ 216 (217)
T cd07398 216 D 216 (217)
T ss_pred C
Confidence 4
No 59
>COG1768 Predicted phosphohydrolase [General function prediction only]
Probab=98.80 E-value=1.7e-07 Score=80.58 Aligned_cols=162 Identities=22% Similarity=0.298 Sum_probs=86.3
Q ss_pred CCCeEeecCccccCCCChhhHHHHhhhhhhhhcCCCeeecCCCcccCCCCCCCcchhhhhhhhccCCCCCCCCCCCceE-
Q 012895 173 DYDVFLLPGDLSYADFQQPLWDSFGRLVEPYASSRPWMVTEGNHEIESIPIILPHAFKAYNARWLMPYEESGSSSNLYY- 251 (454)
Q Consensus 173 ~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~y- 251 (454)
.-|.|++.||+..+-..++.- .=++++..|. -.-+.+.||||+... . .....+. +|. ..+|
T Consensus 43 ~eDiVllpGDiSWaM~l~ea~-~Dl~~i~~LP--G~K~m~rGNHDYWw~-s-----~skl~n~--lp~-------~l~~~ 104 (230)
T COG1768 43 PEDIVLLPGDISWAMRLEEAE-EDLRFIGDLP--GTKYMIRGNHDYWWS-S-----ISKLNNA--LPP-------ILFYL 104 (230)
T ss_pred hhhEEEecccchhheechhhh-hhhhhhhcCC--CcEEEEecCCccccc-h-----HHHHHhh--cCc-------hHhhh
Confidence 458899999998754432211 1123444433 224679999999632 1 1111111 121 1111
Q ss_pred --EEEeCeEEEEEeccc----CCCCCCHHH--------HHHHHHHHHhhccCCCCeEEEEEccccccCCCCCCCCcHHHH
Q 012895 252 --SFDIAGAHIIMLGSY----TDFDEDSAQ--------YKWLKADLAKINRKKTPWIFVLLHAPWYNTNTAHQGEGESMR 317 (454)
Q Consensus 252 --s~~~g~v~fi~Lds~----~~~~~~~~Q--------~~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~~~~~~~~~~~~~ 317 (454)
.|.++++.+++.-.. .++....+| ..-|+..+.++-++...-.|||.|.|+++.....
T Consensus 105 n~~f~l~n~aI~G~RgW~s~~~~~e~~te~Deki~~RE~~RLrlsa~a~l~k~~~~fivM~HYPP~s~~~t~-------- 176 (230)
T COG1768 105 NNGFELLNYAIVGVRGWDSPSFDSEPLTEQDEKIFLREIGRLRLSADAALPKGVSKFIVMTHYPPFSDDGTP-------- 176 (230)
T ss_pred ccceeEeeEEEEEeecccCCCCCcCccchhHHHHHHHHHHHHHHHHHHhcccCcCeEEEEEecCCCCCCCCC--------
Confidence 244555555544221 112112222 2233332222222244458999999998764321
Q ss_pred HHHHHHHHhcCCcEEEecccccceeeecccCCCcCCCCcEEEEECC
Q 012895 318 NSMEELLYNARVDVVFAGHVHAYERFTRIYDNKADPCGPIYITIGD 363 (454)
Q Consensus 318 ~~l~~ll~~~~v~lvl~GH~H~y~r~~~~~~~~~~~~g~~yi~~G~ 363 (454)
..+.+++++++|+.++.||.|.-.|-.+-. .+-.|+-|+.+.+
T Consensus 177 ~~~sevlee~rv~~~lyGHlHgv~~p~~~~---s~v~Gi~y~Lvaa 219 (230)
T COG1768 177 GPFSEVLEEGRVSKCLYGHLHGVPRPNIGF---SNVRGIEYMLVAA 219 (230)
T ss_pred cchHHHHhhcceeeEEeeeccCCCCCCCCc---ccccCceEEEEec
Confidence 356778889999999999999877644311 1234677765543
No 60
>cd00844 MPP_Dbr1_N Dbr1 RNA lariat debranching enzyme, N-terminal metallophosphatase domain. Dbr1 is an RNA lariat debranching enzyme that hydrolyzes 2'-5' phosphodiester bonds at the branch points of excised intron lariats. This alignment model represents the N-terminal metallophosphatase domain of Dbr1. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal s
Probab=98.76 E-value=2.9e-07 Score=87.19 Aligned_cols=178 Identities=17% Similarity=0.217 Sum_probs=97.2
Q ss_pred EEEEecCCCCCChHHHHH---Hhh---cCCCCeEeecCccccCCCCh-----------hhHHHHhhhhhhhh-cCCCeee
Q 012895 150 FAIVGDLGQTEWTNSTLD---HVG---SKDYDVFLLPGDLSYADFQQ-----------PLWDSFGRLVEPYA-SSRPWMV 211 (454)
Q Consensus 150 f~~igD~~~~~~~~~~l~---~i~---~~~pd~vl~~GDl~y~~~~~-----------~~~~~~~~~~~~l~-~~~P~~~ 211 (454)
|++.||+|.. ...+++ .++ ..++|++|++||+....... ..+..|.+.+.... ..+|+++
T Consensus 1 i~v~Gd~HG~--~~~~~~~~~~~~~~~~~~~D~lI~~GDf~~~~~~~d~~~~~~p~k~~~~~~f~~~~~g~~~~p~~t~f 78 (262)
T cd00844 1 IAVEGCCHGE--LDKIYETLEKIEKKEGTKVDLLICCGDFQAVRNEADLKCMAVPPKYRKMGDFYKYYSGEKKAPILTIF 78 (262)
T ss_pred CEEEecCCcc--HHHHHHHHHHHHHhcCCCCcEEEEcCCCCCcCCcchhhhhccchhhhhhhhHHHHhcCCccCCeeEEE
Confidence 5789999974 333433 332 35799999999995322111 12223333333322 2477899
Q ss_pred cCCCcccCCCCCCCcchhhhhhhhccCCCCCCCCCCCceE-----EEEeCeEEEEEecccC---CCC--------CCHHH
Q 012895 212 TEGNHEIESIPIILPHAFKAYNARWLMPYEESGSSSNLYY-----SFDIAGAHIIMLGSYT---DFD--------EDSAQ 275 (454)
Q Consensus 212 v~GNHD~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~y-----s~~~g~v~fi~Lds~~---~~~--------~~~~Q 275 (454)
+.||||... .+ .+ ++... ....+.+| .+++++++|..|.... ++. ..+.+
T Consensus 79 i~GNHE~~~-------~l---~~---l~~gg-~v~~Ni~~Lg~~~v~~~~GlrIaGLsG~~~~~~~~~~~~~~~~~t~~~ 144 (262)
T cd00844 79 IGGNHEASN-------YL---WE---LPYGG-WVAPNIYYLGYAGVVNFGGLRIAGLSGIYKSHDYRKGHFERPPYSEDT 144 (262)
T ss_pred ECCCCCCHH-------HH---Hh---hcCCC-eecCcEEEecCCCEEEECCeEEEEecccccccccccccccCCCCCHHH
Confidence 999999621 11 11 11100 00112332 3567889999997521 111 12333
Q ss_pred HHHHH-------HHHHhhccCCCCeEEEEEccccccCCCCCCCC---------------cHHHHHHHHHHHHhcCCcEEE
Q 012895 276 YKWLK-------ADLAKINRKKTPWIFVLLHAPWYNTNTAHQGE---------------GESMRNSMEELLYNARVDVVF 333 (454)
Q Consensus 276 ~~WL~-------~~L~~~~~~~~~w~Iv~~H~P~~~~~~~~~~~---------------~~~~~~~l~~ll~~~~v~lvl 333 (454)
+..+. ..|..... .. -|+++|.|+.......... .......+..++++.++.+.|
T Consensus 145 ~rs~y~~r~~~~~kl~~~~~-~v--DIlLSHdWP~gI~~~~~~~~l~~~~~~~~~~~~~~~~Gs~~~~~ll~~lkPryhf 221 (262)
T cd00844 145 KRSAYHVRNIEVFKLKQLKQ-PI--DIFLSHDWPRGIYKHGDKKQLLRKKPFFRQDIESGTLGSPAAEELLKHLKPRYWF 221 (262)
T ss_pred HHHhhhhhHHHHHHHHhcCC-CC--cEEEeCCCCcchhhccchHHhhhcCccchhcccccCCCCHHHHHHHHHhCCCEEE
Confidence 33211 12222211 23 5999999987653311100 011345788899999999999
Q ss_pred eccccc-ceeeecc
Q 012895 334 AGHVHA-YERFTRI 346 (454)
Q Consensus 334 ~GH~H~-y~r~~~~ 346 (454)
+||.|. |++..+-
T Consensus 222 ~gH~H~~f~~~~~~ 235 (262)
T cd00844 222 SAHLHVKFAALVPH 235 (262)
T ss_pred EecCCcccceecCC
Confidence 999999 6766543
No 61
>cd07412 MPP_YhcR_N Bacillus subtilis YhcR endonuclease and related proteins, N-terminal metallophosphatase domain. YhcR is a Bacillus subtilis sugar-nonspecific endonuclease. It cleaves endonucleolytically to yield nucleotide 3'-monophosphate products, similar to Staphylococcus aureus micrococcal nuclease. YhcR appears to be located in the cell wall, and is thought to be a substrate for a Bacillus subtilis sortase. YhcR is the major calcium-activated nuclease of B. subtilis. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated wi
Probab=98.71 E-value=4.1e-07 Score=87.99 Aligned_cols=189 Identities=19% Similarity=0.174 Sum_probs=91.2
Q ss_pred eEEEEEecCCCCCC---------------hHHHHHHhhcCCCC-eEeecCccccCCCChhhHHHHhhhhhhhhcCCCeee
Q 012895 148 IEFAIVGDLGQTEW---------------TNSTLDHVGSKDYD-VFLLPGDLSYADFQQPLWDSFGRLVEPYASSRPWMV 211 (454)
Q Consensus 148 ~~f~~igD~~~~~~---------------~~~~l~~i~~~~pd-~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~~~P~~~ 211 (454)
++|++++|+|..-. ....++++++..++ ++|.+||++........+..-...++.+..--.=+.
T Consensus 1 i~il~tnD~Hg~~~~~~~~~~~~~gG~arl~~~i~~~r~~~~~~l~ld~GD~~~gs~~~s~~~~g~~~~~~~n~~g~Da~ 80 (288)
T cd07412 1 VQILAINDFHGRLEPPGKVVTVPAGGAAYLAAYLDEARAQNPNSLFVSAGDLIGASPFESALLQDEPTIEALNAMGVDAS 80 (288)
T ss_pred CeEEEEeccccCccCCCCccccccccHHHHHHHHHHHHhcCCCeEEEeCCcccccccchhhcccCCcHHHHHHhhCCeee
Confidence 47899999985321 12345555555565 788899998644331111111112222222122256
Q ss_pred cCCCcccCCCCCCCcchhhhhhh----------------hccCCCC-------CCCC-CCCceEEEEeCeEE--EEEecc
Q 012895 212 TEGNHEIESIPIILPHAFKAYNA----------------RWLMPYE-------ESGS-SSNLYYSFDIAGAH--IIMLGS 265 (454)
Q Consensus 212 v~GNHD~~~~~~~~~~~~~~~~~----------------~~~~p~~-------~~~~-~~~~~ys~~~g~v~--fi~Lds 265 (454)
++||||+..... .+..+.+ .-..|.- ..+. .-..|.-+++++++ ||++-+
T Consensus 81 t~GNHefd~G~~----~l~~~~~~~~~~~~~~~~~~~~~~a~fp~l~aNv~~~~~~~~~~~py~i~~~~G~kIgviGl~~ 156 (288)
T cd07412 81 AVGNHEFDEGYA----ELLRRINGGCHPTTGCQAGYPFPGANFPYLAANVYDKGTGTPALPPYTIKDVGGVKVGFIGAVT 156 (288)
T ss_pred eecccccccCHH----HHHHHHhccCCccccccccccCcCCCCCEEEEeEEecCCCCcccCCEEEEEECCEEEEEEeecC
Confidence 889999964321 1111111 0011110 0000 11235556788854 555532
Q ss_pred cCC-C--C-------CCHHHHHHHHHHHHhhccCCCCeEEEEEccccccCCCCCCCCcHHHHHHHHHHHHh--cCCcEEE
Q 012895 266 YTD-F--D-------EDSAQYKWLKADLAKINRKKTPWIFVLLHAPWYNTNTAHQGEGESMRNSMEELLYN--ARVDVVF 333 (454)
Q Consensus 266 ~~~-~--~-------~~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~--~~v~lvl 333 (454)
... . . .-..-.+.+++.+++.+.++.+.+|++.|........... .........+++.+ .++|++|
T Consensus 157 ~~~~~~~~~~~~~g~~f~d~~e~~~~~v~~lr~~~~D~IIvL~H~G~~~~~~~~~--~~~~~~~~~~l~~~~~~~iD~Il 234 (288)
T cd07412 157 KDTPNLVSPDGVAGLEFTDEVEAINAVAPELKAGGVDAIVVLAHEGGSTKGGDDT--CSAASGPIADIVNRLDPDVDVVF 234 (288)
T ss_pred CCccceeccccccCceEcCHHHHHHHHHHHHHHCCCCEEEEEeCCCCCCCCCCcc--ccccChhHHHHHhhcCCCCCEEE
Confidence 110 0 0 0022234455555554434677899999987543221110 00011122333444 3799999
Q ss_pred eccccccee
Q 012895 334 AGHVHAYER 342 (454)
Q Consensus 334 ~GH~H~y~r 342 (454)
+||.|....
T Consensus 235 gGHsH~~~~ 243 (288)
T cd07412 235 AGHTHQAYN 243 (288)
T ss_pred eCccCcccc
Confidence 999998543
No 62
>COG0420 SbcD DNA repair exonuclease [DNA replication, recombination, and repair]
Probab=98.65 E-value=1.2e-07 Score=95.89 Aligned_cols=73 Identities=21% Similarity=0.264 Sum_probs=53.9
Q ss_pred eEEEEEecCCCCC-C-------------hHHHHHHhhcCCCCeEeecCccccCCCChh-hHHHHhhhhhhhhc-CCCeee
Q 012895 148 IEFAIVGDLGQTE-W-------------TNSTLDHVGSKDYDVFLLPGDLSYADFQQP-LWDSFGRLVEPYAS-SRPWMV 211 (454)
Q Consensus 148 ~~f~~igD~~~~~-~-------------~~~~l~~i~~~~pd~vl~~GDl~y~~~~~~-~~~~~~~~~~~l~~-~~P~~~ 211 (454)
+||++++|+|.+. . ...+++.+.+.++||||++||+.+...+.. .-..+.+.++++.. .+|+++
T Consensus 1 mkilHtSD~HLG~~~~~~~~r~~d~~~~f~~~l~~a~~~~vD~vliAGDlFd~~~Ps~~a~~~~~~~l~~l~~~~Ipv~~ 80 (390)
T COG0420 1 MKILHTSDWHLGSKQLNLPSRLEDQKKAFDELLEIAKEEKVDFVLIAGDLFDTNNPSPRALKLFLEALRRLKDAGIPVVV 80 (390)
T ss_pred CeeEEecccccchhhccCccchHHHHHHHHHHHHHHHHccCCEEEEccccccCCCCCHHHHHHHHHHHHHhccCCCcEEE
Confidence 6899999999982 1 123556667899999999999998765532 22345566666653 599999
Q ss_pred cCCCcccCC
Q 012895 212 TEGNHEIES 220 (454)
Q Consensus 212 v~GNHD~~~ 220 (454)
+.||||...
T Consensus 81 I~GNHD~~~ 89 (390)
T COG0420 81 IAGNHDSPS 89 (390)
T ss_pred ecCCCCchh
Confidence 999999854
No 63
>cd07411 MPP_SoxB_N Thermus thermophilus SoxB and related proteins, N-terminal metallophosphatase domain. SoxB (sulfur oxidation protein B) is a periplasmic thiosulfohydrolase and an essential component of the sulfur oxidation pathway in archaea and bacteria. SoxB has a dinuclear manganese cluster and is thought to catalyze the release of sulfate from a protein-bound cysteine S-thiosulfonate. SoxB is expressed from the sox (sulfur oxidation) gene cluster, which encodes 15 other sox genes, and has two domains, an N-terminal metallophosphatase domain and a C-terminal 5'-nucleotidase domain. SoxB binds the SoxYZ complex and is thought to function as a sulfate-thiohydrolase. SoxB is closely related to the UshA, YchR, and CpdB proteins, all of which have the same two-domain architecture. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzy
Probab=98.62 E-value=6.6e-07 Score=85.51 Aligned_cols=156 Identities=15% Similarity=0.132 Sum_probs=80.4
Q ss_pred HHHHHhhcC-CCCeE-eecCccccCCCChhhHHHHhhhhhhhhcCCCeeecCCCcccCCCCCCCcchhhhhhhhccCCCC
Q 012895 164 STLDHVGSK-DYDVF-LLPGDLSYADFQQPLWDSFGRLVEPYASSRPWMVTEGNHEIESIPIILPHAFKAYNARWLMPYE 241 (454)
Q Consensus 164 ~~l~~i~~~-~pd~v-l~~GDl~y~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~p~~ 241 (454)
..++++++. .+|.+ +.+||++..... ..+......++.+. ..++.++.||||+..... .+....+.+..|.-
T Consensus 40 ~~v~~~~~~~~~~~l~l~~GD~~~gs~~-~~~~~g~~~~~~l~-~~g~da~~GNHefd~g~~----~l~~~~~~~~~~~l 113 (264)
T cd07411 40 TLIKRIRAERNPNTLLLDGGDTWQGSGE-ALYTRGQAMVDALN-ALGVDAMVGHWEFTYGPE----RVRELFGRLNWPFL 113 (264)
T ss_pred HHHHHHHHhcCCCeEEEeCCCccCCChH-HhhcCChhHHHHHH-hhCCeEEecccccccCHH----HHHHHHhhCCCCEE
Confidence 355666666 89977 569999965432 22222122222222 255555559999864322 33333333333321
Q ss_pred CC-------C-CCCCceEEEEeCe--EEEEEecccCCCC--C--------CHHHHHHHHHHHHhhc-cCCCCeEEEEEcc
Q 012895 242 ES-------G-SSSNLYYSFDIAG--AHIIMLGSYTDFD--E--------DSAQYKWLKADLAKIN-RKKTPWIFVLLHA 300 (454)
Q Consensus 242 ~~-------~-~~~~~~ys~~~g~--v~fi~Lds~~~~~--~--------~~~Q~~WL~~~L~~~~-~~~~~w~Iv~~H~ 300 (454)
.+ + ..-..|.-++.++ +.||++.+..... . .....+.+++.+.+.. .++.+.+|++.|.
T Consensus 114 ~aN~~~~~~~~~~~~~~~i~~~~g~kVgviG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~iI~l~H~ 193 (264)
T cd07411 114 AANVYDDEAGERVFPPYRIKEVGGVKIGVIGQTFPYVPIANPPRFTPGLTFGIREEELQEVVVKLRREEGVDVVVLLSHN 193 (264)
T ss_pred EEEEEeCCCCCcccCCEEEEEECCEEEEEEEeccCCcccccCcCCCCCcEECCHHHHHHHHHHHHHHhCCCCEEEEEecC
Confidence 10 0 0112355567888 4556665421100 0 1223445555533332 2356789999998
Q ss_pred ccccCCCCCCCCcHHHHHHHHHHHHh-cCCcEEEecccccc
Q 012895 301 PWYNTNTAHQGEGESMRNSMEELLYN-ARVDVVFAGHVHAY 340 (454)
Q Consensus 301 P~~~~~~~~~~~~~~~~~~l~~ll~~-~~v~lvl~GH~H~y 340 (454)
+... . ..+ .++ .++|++|+||.|..
T Consensus 194 g~~~--------~----~~l---a~~~~~iDlilgGH~H~~ 219 (264)
T cd07411 194 GLPV--------D----VEL---AERVPGIDVILSGHTHER 219 (264)
T ss_pred Cchh--------h----HHH---HhcCCCCcEEEeCccccc
Confidence 7421 0 122 222 47999999999974
No 64
>cd07408 MPP_SA0022_N Staphylococcus aureus SA0022 and related proteins, N-terminal metallophosphatase domain. SA0022 is an uncharacterized Staphylococcus aureus UshA-like protein with two putative domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. SA0022 also contains a putative C-terminal cell wall anchor domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet
Probab=98.60 E-value=6.9e-07 Score=85.02 Aligned_cols=182 Identities=18% Similarity=0.144 Sum_probs=91.1
Q ss_pred eEEEEEecCCCCCCh-----------HHHHHHhhcCCCCeEeecCccccCCCChhhHHHHhhhhhhhhcCCCeeecCCCc
Q 012895 148 IEFAIVGDLGQTEWT-----------NSTLDHVGSKDYDVFLLPGDLSYADFQQPLWDSFGRLVEPYASSRPWMVTEGNH 216 (454)
Q Consensus 148 ~~f~~igD~~~~~~~-----------~~~l~~i~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNH 216 (454)
+++++++|+|..... ...++++++.+.++++.+||++..... ..+..-...++.+...-.-+.++|||
T Consensus 1 i~il~~~D~H~~~~~~~~~~~g~~~l~~~i~~~~~~~~~l~l~~GD~~~gs~~-~~~~~g~~~~~~ln~~g~d~~~~GNH 79 (257)
T cd07408 1 ITILHTNDIHGRIDEDDNNGIGYAKLATYKKEMNKLDNDLLVDAGDAIQGLPI-SDLDKGETIIKIMNAVGYDAVTPGNH 79 (257)
T ss_pred CEEEEeccCcccccCCCCccccHHHHHHHHHHHHhcCCEEEEeCCCcCCCchh-hhhcCCcHHHHHHHhcCCcEEccccc
Confidence 589999999864211 234455554467899999999865332 11111112223332222234578999
Q ss_pred ccCCCCCCCcchhhhhhhhccCCCCC-------CCCC-CCceEEEEeC-e--EEEEEecccCC-C----C--CC---HHH
Q 012895 217 EIESIPIILPHAFKAYNARWLMPYEE-------SGSS-SNLYYSFDIA-G--AHIIMLGSYTD-F----D--ED---SAQ 275 (454)
Q Consensus 217 D~~~~~~~~~~~~~~~~~~~~~p~~~-------~~~~-~~~~ys~~~g-~--v~fi~Lds~~~-~----~--~~---~~Q 275 (454)
|+.... ..+..+.+.+..|.-. .+.. -..|.-++.+ + +-|+++-+... . . .+ ..-
T Consensus 80 efd~G~----~~l~~~~~~~~~~~l~aNv~~~~~~~~~~~py~i~~~~~G~kIgviG~~~~~~~~~~~~~~~~~~~~~d~ 155 (257)
T cd07408 80 EFDYGL----DRLKELSKEADFPFLSANVYDNDTGKRVFKPYKIKELGNGVKVGVIGLTTPETATKTHPKNVKDVTFEDP 155 (257)
T ss_pred cccCCH----HHHHHHHhhCCCCEEEEEEEEcCCCCcccCCEEEEEcCCCCEEEEEeecCcCcccccCccccCCcEEecH
Confidence 995432 2333333333333310 0110 1124445777 6 55666644210 0 0 00 112
Q ss_pred HHHHHHH-HHhhccCCCCeEEEEEccccccCCCCCCCCcHHHHHHHHHHHHhcCCcEEEeccccccee
Q 012895 276 YKWLKAD-LAKINRKKTPWIFVLLHAPWYNTNTAHQGEGESMRNSMEELLYNARVDVVFAGHVHAYER 342 (454)
Q Consensus 276 ~~WL~~~-L~~~~~~~~~w~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~y~r 342 (454)
.+-+++. ..+..+++.+.+|++.|.+....... . ....+.+ .-.++|++|.||.|....
T Consensus 156 ~~~~~~~~v~~l~~~~~D~iIvl~H~G~~~~~~~---~---~~~~la~--~~~giDvIigGH~H~~~~ 215 (257)
T cd07408 156 IEEAKKVIVAALKAKGADVIVALGHLGVDRTSSP---W---TSTELAA--NVTGIDLIIDGHSHTTIE 215 (257)
T ss_pred HHHHHHHHHHHHHhCCCCEEEEEeCcCcCCCCCC---c---cHHHHHH--hCCCceEEEeCCCccccc
Confidence 2333333 22222336778999999886433110 0 1122222 124799999999998543
No 65
>COG0622 Predicted phosphoesterase [General function prediction only]
Probab=98.60 E-value=3.1e-06 Score=74.77 Aligned_cols=63 Identities=14% Similarity=0.156 Sum_probs=45.3
Q ss_pred eEEEEEecCCCCCC-hHHHHHHhhcCCCCeEeecCccccCCCChhhHHHHhhhhhhhhcCCCeeecCCCcccC
Q 012895 148 IEFAIVGDLGQTEW-TNSTLDHVGSKDYDVFLLPGDLSYADFQQPLWDSFGRLVEPYASSRPWMVTEGNHEIE 219 (454)
Q Consensus 148 ~~f~~igD~~~~~~-~~~~l~~i~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~ 219 (454)
++++++||+|.... .....+.....++|+|||+||.+...... .+ +.. -..++++|.||.|..
T Consensus 2 m~ilviSDtH~~~~~~~~~~~~~~~~~~d~vih~GD~~~~~~~~----~l----~~~-~~~~i~~V~GN~D~~ 65 (172)
T COG0622 2 MKILVISDTHGPLRAIEKALKIFNLEKVDAVIHAGDSTSPFTLD----AL----EGG-LAAKLIAVRGNCDGE 65 (172)
T ss_pred cEEEEEeccCCChhhhhHHHHHhhhcCCCEEEECCCcCCccchH----Hh----hcc-cccceEEEEccCCCc
Confidence 68999999998764 23455555678999999999999754321 11 110 137899999999984
No 66
>COG2908 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=98.59 E-value=1.5e-07 Score=85.72 Aligned_cols=68 Identities=18% Similarity=0.160 Sum_probs=43.5
Q ss_pred EEEecCCCCCChH----HHHHHhhcC--CCCeEeecCccccCC----CChhhHHHHhhhhhhhhcC-CCeeecCCCccc
Q 012895 151 AIVGDLGQTEWTN----STLDHVGSK--DYDVFLLPGDLSYAD----FQQPLWDSFGRLVEPYASS-RPWMVTEGNHEI 218 (454)
Q Consensus 151 ~~igD~~~~~~~~----~~l~~i~~~--~pd~vl~~GDl~y~~----~~~~~~~~~~~~~~~l~~~-~P~~~v~GNHD~ 218 (454)
++|||.|.+.... -.++-++.. +.|.++++||+++.- .+...-++....+..+..+ .|+|+++||||+
T Consensus 1 lFISDlHL~~~~p~~t~~fl~Fl~~~a~~ad~lyilGDifd~w~g~~~~~~~~~~V~~~l~~~a~~G~~v~~i~GN~Df 79 (237)
T COG2908 1 LFISDLHLGPKRPALTAFFLDFLREEAAQADALYILGDIFDGWIGDDEPPQLHRQVAQKLLRLARKGTRVYYIHGNHDF 79 (237)
T ss_pred CeeeccccCCCCcHHHHHHHHHHHhccccCcEEEEechhhhhhhcCCcccHHHHHHHHHHHHHHhcCCeEEEecCchHH
Confidence 3799999984432 233444433 559999999998632 1222223333444445444 999999999997
No 67
>cd07409 MPP_CD73_N CD73 ecto-5'-nucleotidase and related proteins, N-terminal metallophosphatase domain. CD73 is a mammalian ecto-5'-nucleotidase expressed in endothelial cells and lymphocytes that catalyzes the conversion of 5'-AMP to adenosine in the final step of a pathway that generates adenosine from ATP. This pathway also includes a CD39 nucleoside triphosphate dephosphorylase that mediates the dephosphorylation of ATP to ADP and then to 5'-AMP. These enzymes all have an N-terminal metallophosphatase domain and a C-terminal 5'nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active si
Probab=98.54 E-value=1.3e-06 Score=84.25 Aligned_cols=173 Identities=15% Similarity=0.182 Sum_probs=90.8
Q ss_pred eEEEEEecCCCCCC----------------------hHHHHHHhhcCCCCe-EeecCccccCCCChhh--HHHHhhhhhh
Q 012895 148 IEFAIVGDLGQTEW----------------------TNSTLDHVGSKDYDV-FLLPGDLSYADFQQPL--WDSFGRLVEP 202 (454)
Q Consensus 148 ~~f~~igD~~~~~~----------------------~~~~l~~i~~~~pd~-vl~~GDl~y~~~~~~~--~~~~~~~~~~ 202 (454)
++|++.+|+|..-. ....++++++..++. ++.+||++........ .+...+.+..
T Consensus 1 l~il~tnD~Hg~l~~~~~~~~~~~~~~~~~~gG~ar~~~~v~~~r~~~~~~l~ld~GD~~~gs~~~~~~~g~~~~~~ln~ 80 (281)
T cd07409 1 LTILHTNDHHSRFEETNPSGGVKDAATEKCYGGFARVATLVKELRAENPNVLFLNAGDAFQGTLWYTLYKGNADAEFMNL 80 (281)
T ss_pred CEEEEeccccccccccCccccccccccccccCCHHHHHHHHHHHHhcCCCEEEEeCCCCCCCcchhhhcCChHHHHHHHh
Confidence 47889999885310 023455666667775 5559999875432111 1122223322
Q ss_pred hhcCCCeeecCCCcccCCCCCCCcchhhhhhhhccCCCCC------CC-----CCCCceEEEEeCeEE--EEEecccCC-
Q 012895 203 YASSRPWMVTEGNHEIESIPIILPHAFKAYNARWLMPYEE------SG-----SSSNLYYSFDIAGAH--IIMLGSYTD- 268 (454)
Q Consensus 203 l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~p~~~------~~-----~~~~~~ys~~~g~v~--fi~Lds~~~- 268 (454)
+. .. +.++||||+..... .+..+.+....|.-. .+ ..-..|.-++.++++ ||++-+...
T Consensus 81 ~g--~D-~~~lGNHefd~G~~----~l~~~~~~~~~p~l~aNv~~~~~~~~~~~~~~p~~i~~~~G~kIgviG~~~~~~~ 153 (281)
T cd07409 81 LG--YD-AMTLGNHEFDDGVE----GLAPFLNNLKFPVLSANIDTSNEPPLLDGLLKPSTILTVGGEKIGIIGYTTPDTT 153 (281)
T ss_pred cC--CC-EEEeccccccCCHH----HHHHHHHhCCCCEEEEeeecCCCccccccccCCeEEEEECCEEEEEEEEecCccc
Confidence 21 33 45789999965432 333333333333211 00 001235567788855 555543211
Q ss_pred -C-C--C---CHHHHHHHHHHHHhhccCCCCeEEEEEccccccCCCCCCCCcHHHHHHHHHHHHhcCCcEEEecccccce
Q 012895 269 -F-D--E---DSAQYKWLKADLAKINRKKTPWIFVLLHAPWYNTNTAHQGEGESMRNSMEELLYNARVDVVFAGHVHAYE 341 (454)
Q Consensus 269 -~-~--~---~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~y~ 341 (454)
. . . -.+..+.+++.+++.+.++.+.+|++.|...- ....+.+.+ .++|++++||.|...
T Consensus 154 ~~~~~~~~~~~~d~~~~~~~~v~~lr~~~~D~II~l~H~G~~------------~d~~la~~~--~giD~IiggH~H~~~ 219 (281)
T cd07409 154 ELSSPGGKVKFLDEIEAAQKEADKLKAQGVNKIIALSHSGYE------------VDKEIARKV--PGVDVIVGGHSHTFL 219 (281)
T ss_pred ccccCCCceEECCHHHHHHHHHHHHHhcCCCEEEEEeccCch------------hHHHHHHcC--CCCcEEEeCCcCccc
Confidence 0 0 0 12334556666666655467788999998631 112222222 479999999999853
No 68
>cd07382 MPP_DR1281 Deinococcus radiodurans DR1281 and related proteins, metallophosphatase domain. DR1281 is an uncharacterized Deinococcus radiodurans protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=98.49 E-value=7.5e-06 Score=77.21 Aligned_cols=183 Identities=19% Similarity=0.223 Sum_probs=95.7
Q ss_pred EEEEEecCCCCCCh---HHHHHHhh-cCCCCeEeecCccccCCCChhhHHHHhhhhhhhhcCCCeeecCCCcccCCCCCC
Q 012895 149 EFAIVGDLGQTEWT---NSTLDHVG-SKDYDVFLLPGDLSYADFQQPLWDSFGRLVEPYASSRPWMVTEGNHEIESIPII 224 (454)
Q Consensus 149 ~f~~igD~~~~~~~---~~~l~~i~-~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~~ 224 (454)
|++++||.-..... ...+..++ +.++||+|..||++-.+.... ....+.+..+. +-+ .+.|||+++..
T Consensus 1 ~ilfigdi~g~~G~~~~~~~l~~lk~~~~~D~vi~NgEn~~gg~gl~--~~~~~~L~~~G--~D~-iTlGNH~fD~g--- 72 (255)
T cd07382 1 KILFIGDIVGKPGRKAVKEHLPKLKKEYKIDFVIANGENAAGGKGIT--PKIAKELLSAG--VDV-ITMGNHTWDKK--- 72 (255)
T ss_pred CEEEEEeCCCHHHHHHHHHHHHHHHHHCCCCEEEECCccccCCCCCC--HHHHHHHHhcC--CCE-EEecccccCcc---
Confidence 58999998433222 23444454 567999999999986542111 11222222221 444 46699999643
Q ss_pred Ccchhhhhhhhc---cCCCCC-CCCCCCceEEEEeCeEEEEEecc--cCCCCCCHHHHHHHHHHHHhhccCCCCeEEEEE
Q 012895 225 LPHAFKAYNARW---LMPYEE-SGSSSNLYYSFDIAGAHIIMLGS--YTDFDEDSAQYKWLKADLAKINRKKTPWIFVLL 298 (454)
Q Consensus 225 ~~~~~~~~~~~~---~~p~~~-~~~~~~~~ys~~~g~v~fi~Lds--~~~~~~~~~Q~~WL~~~L~~~~~~~~~w~Iv~~ 298 (454)
....+.+.. -.|.+- ...+...|.-++.++.++-+++- .........-.+-+++.+++.+. +.+.+||.+
T Consensus 73 ---el~~~l~~~~~~l~~aN~~~~~pg~~~~i~~~~G~kIaVigl~g~~~~~~~~~P~~~~~~~v~~lk~-~~D~IIV~~ 148 (255)
T cd07382 73 ---EILDFIDEEPRLLRPANYPPGTPGRGYGVVEVNGKKIAVINLMGRVFMPPLDNPFRAADELLEELKE-EADIIFVDF 148 (255)
T ss_pred ---hHHHHHhcCcCceEeeecCCCCCCCCeEEEEECCEEEEEEEEecccCCCcCCCHHHHHHHHHHHHhc-CCCEEEEEE
Confidence 122222211 111111 11123457777888866555442 21111112223446666666544 567899999
Q ss_pred ccccccCCCCCCCCcHHHHHHHHHHHHhcCCcEEEecccccceeeecccCCCcCCCCcEEEE
Q 012895 299 HAPWYNTNTAHQGEGESMRNSMEELLYNARVDVVFAGHVHAYERFTRIYDNKADPCGPIYIT 360 (454)
Q Consensus 299 H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~y~r~~~~~~~~~~~~g~~yi~ 360 (454)
|.-.. ..+..+... -..+||+++.||+|..-.-.++ -|+|+.|++
T Consensus 149 H~g~t-----------sEk~ala~~-ldg~VdvIvGtHTHv~t~d~~i-----l~~gTa~it 193 (255)
T cd07382 149 HAEAT-----------SEKIALGWY-LDGRVSAVVGTHTHVQTADERI-----LPGGTAYIT 193 (255)
T ss_pred CCCCC-----------HHHHHHHHh-CCCCceEEEeCCCCccCCccEE-----eeCCeEEEe
Confidence 97421 112233321 2335999999999984222211 146888876
No 69
>KOG3662 consensus Cell division control protein/predicted DNA repair exonuclease [Replication, recombination and repair]
Probab=98.49 E-value=1.3e-06 Score=86.00 Aligned_cols=113 Identities=15% Similarity=0.120 Sum_probs=73.6
Q ss_pred CCCeEEEEEecCCCCCCh------------------HHHHHHh-hcCCCCeEeecCccccCCCC--hhhHHHHhhhhhhh
Q 012895 145 NFPIEFAIVGDLGQTEWT------------------NSTLDHV-GSKDYDVFLLPGDLSYADFQ--QPLWDSFGRLVEPY 203 (454)
Q Consensus 145 ~~~~~f~~igD~~~~~~~------------------~~~l~~i-~~~~pd~vl~~GDl~y~~~~--~~~~~~~~~~~~~l 203 (454)
+..+|++.++|.|.-+.. +.....+ ...+||.++++||+.+++.+ .++|....+-++++
T Consensus 46 ~n~~ki~~vaDPQilg~~~~~~~~~~Ldk~~~D~~lrr~f~~~~~~lkPdvvffLGDLfDeG~~~~~eEf~~~~~RfkkI 125 (410)
T KOG3662|consen 46 ENSTKILLVADPQILGNWPKKFLVSWLDKYGNDWYLRRSFDMSQWRLKPDVVFFLGDLFDEGQWAGDEEFKKRYERFKKI 125 (410)
T ss_pred CCceEEEEecCchhcCCCCCccccchHHhhhhHHHHHHHHHHHHhccCCCEEEEeccccccCccCChHHHHHHHHHHHHh
Confidence 578999999999875421 1122222 26799999999999986654 45664433333333
Q ss_pred h---cCCCeeecCCCcccCCCCCCCcchhhhhhhhccCCCCCCCCCCCceEEEEeCeEEEEEecccC
Q 012895 204 A---SSRPWMVTEGNHEIESIPIILPHAFKAYNARWLMPYEESGSSSNLYYSFDIAGAHIIMLGSYT 267 (454)
Q Consensus 204 ~---~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~Lds~~ 267 (454)
. ..+|++.++||||++.....-......|...|. +....|++++..|+++|+..
T Consensus 126 f~~k~~~~~~~i~GNhDIGf~~~~~~~~i~Rfe~~fg----------~~~r~f~v~~~tf~~~d~~~ 182 (410)
T KOG3662|consen 126 FGRKGNIKVIYIAGNHDIGFGNELIPEWIDRFESVFG----------PTERRFDVGNLTFVMFDSNA 182 (410)
T ss_pred hCCCCCCeeEEeCCccccccccccchhHHHHHHHhhc----------chhhhhccCCceeEEeeehh
Confidence 2 259999999999997654321112233433332 34566899999999999864
No 70
>PRK04036 DNA polymerase II small subunit; Validated
Probab=98.45 E-value=1.9e-06 Score=89.59 Aligned_cols=76 Identities=11% Similarity=0.174 Sum_probs=53.8
Q ss_pred CCCeEEEEEecCCCCCCh------HHHHHHhh---------cCCCCeEeecCccccCCCC-------------hhhHHHH
Q 012895 145 NFPIEFAIVGDLGQTEWT------NSTLDHVG---------SKDYDVFLLPGDLSYADFQ-------------QPLWDSF 196 (454)
Q Consensus 145 ~~~~~f~~igD~~~~~~~------~~~l~~i~---------~~~pd~vl~~GDl~y~~~~-------------~~~~~~~ 196 (454)
..++++++++|+|.+... +..++.+. ..+++.+|++||+++..+. ...++.+
T Consensus 241 ~~~~~i~~ISDlHlgs~~~~~~~l~~li~~L~g~~~~~~~~~~~~d~lVIaGDivd~~~~~p~~~~~~~~~~~~~~~~~l 320 (504)
T PRK04036 241 DEKVYAVFISDVHVGSKEFLEDAFEKFIDWLNGEVGNEEEIASRVKYLIIAGDLVDGIGIYPGQEEELEIVDIYEQYEAA 320 (504)
T ss_pred CCccEEEEEcccCCCCcchhHHHHHHHHHHHhCCCccchhhhhcCCEEEEeCcccccccCCccchhhccchhhHHHHHHH
Confidence 567899999999976532 23344555 5679999999999974221 0123445
Q ss_pred hhhhhhhhcCCCeeecCCCcccCC
Q 012895 197 GRLVEPYASSRPWMVTEGNHEIES 220 (454)
Q Consensus 197 ~~~~~~l~~~~P~~~v~GNHD~~~ 220 (454)
.++++.+...+|+++++||||...
T Consensus 321 ~~~L~~L~~~i~V~~ipGNHD~~~ 344 (504)
T PRK04036 321 AEYLKQIPEDIKIIISPGNHDAVR 344 (504)
T ss_pred HHHHHhhhcCCeEEEecCCCcchh
Confidence 566777766789999999999853
No 71
>TIGR00619 sbcd exonuclease SbcD. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=98.42 E-value=5.5e-07 Score=85.38 Aligned_cols=72 Identities=17% Similarity=0.266 Sum_probs=51.6
Q ss_pred eEEEEEecCCCCCCh-------------HHHHHHhhcCCCCeEeecCccccCCCChh-hHHHHhhhhhhhhc-C-CCeee
Q 012895 148 IEFAIVGDLGQTEWT-------------NSTLDHVGSKDYDVFLLPGDLSYADFQQP-LWDSFGRLVEPYAS-S-RPWMV 211 (454)
Q Consensus 148 ~~f~~igD~~~~~~~-------------~~~l~~i~~~~pd~vl~~GDl~y~~~~~~-~~~~~~~~~~~l~~-~-~P~~~ 211 (454)
+||++++|+|.+... ..+++.+.+.++|+||++||+++...... ....+.+.++++.. . +|+++
T Consensus 1 mkilh~SD~Hlg~~~~~~~~~~~~~~~l~~l~~~~~~~~~D~lli~GDi~d~~~p~~~~~~~~~~~l~~l~~~~~i~v~~ 80 (253)
T TIGR00619 1 MRILHTSDWHLGKTLEGVSRLAEQKAFLDDLLEFAKAEQIDALLVAGDVFDTANPPAEAQELFNAFFRNLSDANPIPIVV 80 (253)
T ss_pred CEEEEEhhhcCCCccCCCChHHHHHHHHHHHHHHHHHcCCCEEEECCccCCCCCCCHHHHHHHHHHHHHHHhcCCceEEE
Confidence 689999999986431 12344455789999999999998665422 22335566666654 3 89999
Q ss_pred cCCCcccC
Q 012895 212 TEGNHEIE 219 (454)
Q Consensus 212 v~GNHD~~ 219 (454)
++||||..
T Consensus 81 i~GNHD~~ 88 (253)
T TIGR00619 81 ISGNHDSA 88 (253)
T ss_pred EccCCCCh
Confidence 99999984
No 72
>cd07386 MPP_DNA_pol_II_small_archeal_C archeal DNA polymerase II, small subunit, C-terminal metallophosphatase domain. The small subunit of the archeal DNA polymerase II contains a C-terminal metallophosphatase domain. This domain is thought to be functionally active because the active site residues required for phosphoesterase activity in other members of this superfamily are intact. The archeal replicative DNA polymerases are thought to possess intrinsic phosphatase activity that hydrolyzes the pyrophosphate released during nucleotide polymerization. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiestera
Probab=98.37 E-value=4e-06 Score=79.14 Aligned_cols=69 Identities=13% Similarity=0.183 Sum_probs=46.7
Q ss_pred EEEecCCCCCCh--H----HHHHHhhcC-----CCCeEeecCccccCCCC-------------hhhHHHHhhhhhhhhcC
Q 012895 151 AIVGDLGQTEWT--N----STLDHVGSK-----DYDVFLLPGDLSYADFQ-------------QPLWDSFGRLVEPYASS 206 (454)
Q Consensus 151 ~~igD~~~~~~~--~----~~l~~i~~~-----~pd~vl~~GDl~y~~~~-------------~~~~~~~~~~~~~l~~~ 206 (454)
++++|+|.+... . ..++.+... ++|.|+++||+++.... ...+..+.++++.+...
T Consensus 2 ~~iSDlHl~~~~~~~~~~~~l~~~l~~~~~~~~~~d~lvi~GDl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~~ 81 (243)
T cd07386 2 VFISDVHVGSKTFLEDAFEKFVRWLNGEDDSASRVKYLIIAGDLVDGIGVYPGQEEELEILDIYEQYEEAAEYLSDVPSH 81 (243)
T ss_pred EEecccCCCchhhhHHHHHHHHHHHcCCcccccCccEEEEeCCcccccccCCcchhhhhhhhHHHHHHHHHHHHHhcccC
Confidence 689999975432 1 233444332 57999999999975210 11234455666777667
Q ss_pred CCeeecCCCcccC
Q 012895 207 RPWMVTEGNHEIE 219 (454)
Q Consensus 207 ~P~~~v~GNHD~~ 219 (454)
+|+++++||||..
T Consensus 82 ~~v~~ipGNHD~~ 94 (243)
T cd07386 82 IKIIIIPGNHDAV 94 (243)
T ss_pred CeEEEeCCCCCcc
Confidence 9999999999985
No 73
>PRK10966 exonuclease subunit SbcD; Provisional
Probab=98.34 E-value=1.1e-06 Score=88.95 Aligned_cols=72 Identities=17% Similarity=0.226 Sum_probs=50.4
Q ss_pred eEEEEEecCCCCCCh-------------HHHHHHhhcCCCCeEeecCccccCCCChhhH-HHHhhhhhhhhc-CCCeeec
Q 012895 148 IEFAIVGDLGQTEWT-------------NSTLDHVGSKDYDVFLLPGDLSYADFQQPLW-DSFGRLVEPYAS-SRPWMVT 212 (454)
Q Consensus 148 ~~f~~igD~~~~~~~-------------~~~l~~i~~~~pd~vl~~GDl~y~~~~~~~~-~~~~~~~~~l~~-~~P~~~v 212 (454)
+||++++|+|.+... ..+++.+.+.+||+||++||+++........ ..+.+++..+.. .+|++++
T Consensus 1 mkilh~SDlHlG~~~~~~~~~~~~~~~l~~l~~~i~~~~~D~viIaGDifD~~~p~~~a~~~~~~~l~~L~~~~~~v~~I 80 (407)
T PRK10966 1 MRILHTSDWHLGQNFYSKSRAAEHQAFLDWLLEQVQEHQVDAIIVAGDIFDTGSPPSYARELYNRFVVNLQQTGCQLVVL 80 (407)
T ss_pred CEEEEEcccCCCCcccCcccHHHHHHHHHHHHHHHHhcCCCEEEECCccccCCCCcHHHHHHHHHHHHHHHhcCCcEEEE
Confidence 689999999986321 1234455688999999999999765442221 234455555543 3899999
Q ss_pred CCCcccC
Q 012895 213 EGNHEIE 219 (454)
Q Consensus 213 ~GNHD~~ 219 (454)
+||||..
T Consensus 81 ~GNHD~~ 87 (407)
T PRK10966 81 AGNHDSV 87 (407)
T ss_pred cCCCCCh
Confidence 9999984
No 74
>cd07424 MPP_PrpA_PrpB PrpA and PrpB, metallophosphatase domain. PrpA and PrpB are bacterial type I serine/threonine and tyrosine phosphatases thought to modulate the expression of proteins that protect the cell upon accumulation of misfolded proteins in the periplasm. The PPP (phosphoprotein phosphatase) family, to which PrpA and PrpB belong, is one of two known protein phosphatase families specific for serine and threonine. This family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all
Probab=98.33 E-value=1.1e-06 Score=80.81 Aligned_cols=64 Identities=25% Similarity=0.213 Sum_probs=42.5
Q ss_pred EEEEEecCCCCCCh-HHHHHHhhc-CCCCeEeecCccccCCCChhhHHHHhhhhhhhhcCCCeeecCCCcccC
Q 012895 149 EFAIVGDLGQTEWT-NSTLDHVGS-KDYDVFLLPGDLSYADFQQPLWDSFGRLVEPYASSRPWMVTEGNHEIE 219 (454)
Q Consensus 149 ~f~~igD~~~~~~~-~~~l~~i~~-~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~ 219 (454)
|++++||+|..... .++++.+.. .++|.++++||+++.+.... +.++.+.. .+++++.||||..
T Consensus 2 ri~~isDiHg~~~~l~~~l~~~~~~~~~d~~~~~GD~v~~g~~~~------~~~~~l~~-~~~~~v~GNhe~~ 67 (207)
T cd07424 2 RDFVVGDIHGHYSLLQKALDAVGFDPARDRLISVGDLIDRGPESL------ACLELLLE-PWFHAVRGNHEQM 67 (207)
T ss_pred CEEEEECCCCCHHHHHHHHHHcCCCCCCCEEEEeCCcccCCCCHH------HHHHHHhc-CCEEEeECCChHH
Confidence 68999999965322 234444432 46999999999998654421 22333322 4689999999973
No 75
>cd07425 MPP_Shelphs Shewanella-like phosphatases, metallophosphatase domain. This family includes bacterial, eukaryotic, and archeal proteins orthologous to the Shewanella cold-active protein-tyrosine phosphatase, CAPTPase. CAPTPase is an uncharacterized protein that belongs to the Shelph (Shewanella-like phosphatase) family of PPP (phosphoprotein phosphatases). The PPP family is one of two known protein phosphatase families specific for serine and threonine. In addition to Shelps, the PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metal
Probab=98.32 E-value=7.9e-07 Score=81.68 Aligned_cols=66 Identities=18% Similarity=0.086 Sum_probs=42.6
Q ss_pred EEEecCCCCCC-hHHHHHHhh--------cCCCCeEeecCccccCCCChhhHHHHhhhhhhhh-----cCCCeeecCCCc
Q 012895 151 AIVGDLGQTEW-TNSTLDHVG--------SKDYDVFLLPGDLSYADFQQPLWDSFGRLVEPYA-----SSRPWMVTEGNH 216 (454)
Q Consensus 151 ~~igD~~~~~~-~~~~l~~i~--------~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~l~-----~~~P~~~v~GNH 216 (454)
+++||+|.... ..++++.+. ..+.|.++++||+++.+....+ ..+.+..+. ...+++++.|||
T Consensus 1 ~vi~DIHG~~~~l~~ll~~~~~~~~~~~~~~~~d~lv~lGD~vdrG~~~~~---vl~~l~~l~~~~~~~~~~v~~l~GNH 77 (208)
T cd07425 1 VAIGDLHGDLDAFREILKGAGVIDSNDHWIGGSTHLVQLGDIFDRGPDVIE---ILWLLYKLEQEAAKAGGKVHFLLGNH 77 (208)
T ss_pred CEEeCccCCHHHHHHHHHHCCCCCccccccCCCcEEEEECCCcCCCcCHHH---HHHHHHHHHHHHHhcCCeEEEeeCCC
Confidence 47999997643 234555443 2468999999999986654321 222222222 236799999999
Q ss_pred ccC
Q 012895 217 EIE 219 (454)
Q Consensus 217 D~~ 219 (454)
|..
T Consensus 78 E~~ 80 (208)
T cd07425 78 ELM 80 (208)
T ss_pred cHH
Confidence 984
No 76
>cd07405 MPP_UshA_N Escherichia coli UshA and related proteins, N-terminal metallophosphatase domain. UshA is a bacterial periplasmic enzyme with UDP-sugar hydrolase and dinucleoside-polyphosphate hydrolase activities associated with its N-terminal metallophosphatase domain, and 5'-nucleotidase activity associated with its C-terminal domain. UshA has been studied in Escherichia coli where it is expressed from the ushA gene as an immature precursor and proteolytically cleaved to form a mature product upon export to the periplasm. UshA hydrolyzes many different nucleotides and nucleotide derivitives and has been shown to degrade external UDP-glucose to uridine, glucose 1-phosphate and phosphate for utilization by the cell. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs
Probab=98.30 E-value=1.1e-05 Score=77.88 Aligned_cols=187 Identities=17% Similarity=0.176 Sum_probs=88.2
Q ss_pred eEEEEEecCCCCCCh-----------HHHHHHhhcC----CC-CeEeecCccccCCCChhhHHHHhhhhhhhhcCCCeee
Q 012895 148 IEFAIVGDLGQTEWT-----------NSTLDHVGSK----DY-DVFLLPGDLSYADFQQPLWDSFGRLVEPYASSRPWMV 211 (454)
Q Consensus 148 ~~f~~igD~~~~~~~-----------~~~l~~i~~~----~p-d~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~~~P~~~ 211 (454)
+++++.+|+|..-.. ...++++++. .+ -+++.+||++..... ..+..-...++.+..---=+.
T Consensus 1 ltIl~tnD~Hg~l~~~~~~~gG~ar~a~~i~~~r~~~~~~~~~~l~ld~GD~~~Gs~~-~~~~~g~~~~~~~n~~g~Da~ 79 (285)
T cd07405 1 ITILHTNDHHGHFWPNGTGEYGLAAQKTLVDGVRREVAAQGGYVLLLSGGDINTGVPE-SDLQDAEPDFRGMNLVGYDAM 79 (285)
T ss_pred CEEEEEcccccccccCCCCCccHHHHHHHHHHHHHHhhccCCCEEEEeCCCcCCCchh-HHhcCcchHHHHHHhhCCcEE
Confidence 578999999874211 2345555432 33 478889999854332 111111111121221122345
Q ss_pred cCCCcccCCCCCCCcchhhhhhhhccCCCCC------CCC-CCCceEEEEeCeEE--EEEecccCC-C--C----CC---
Q 012895 212 TEGNHEIESIPIILPHAFKAYNARWLMPYEE------SGS-SSNLYYSFDIAGAH--IIMLGSYTD-F--D----ED--- 272 (454)
Q Consensus 212 v~GNHD~~~~~~~~~~~~~~~~~~~~~p~~~------~~~-~~~~~ys~~~g~v~--fi~Lds~~~-~--~----~~--- 272 (454)
++||||+..... .+.........|.-. .+. .-..|.-++.++++ ||++-+... . . .+
T Consensus 80 ~~GNHEfD~G~~----~L~~~~~~~~fp~l~aNv~~~~g~~~~~p~~i~~~~G~kIgviG~t~~~~~~~~~~~~~~~~~f 155 (285)
T cd07405 80 AVGNHEFDNPLE----VLRQQMKWANFPLLSANIYQESGERLFKPYALFDLGGLKIAVIGLTTDDTAKIGNPAYFEGIEF 155 (285)
T ss_pred eecccccccCHH----HHHHHHhhCCCCEEEEEEEecCCCCccCCeEEEEECCEEEEEEEecccccccccCcCCcCCcEE
Confidence 779999965422 222222211122110 011 11235567788855 455543110 0 0 00
Q ss_pred HHHHHHHHHHHHhhccCCCCeEEEEEccccccCCCCCCCCcHHHHHHHHHHHHhcCCcEEEecccccce
Q 012895 273 SAQYKWLKADLAKINRKKTPWIFVLLHAPWYNTNTAHQGEGESMRNSMEELLYNARVDVVFAGHVHAYE 341 (454)
Q Consensus 273 ~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~y~ 341 (454)
....+=+++.+++.+.++.+.+|++.|......... .........+.+.+...++|++|.||.|...
T Consensus 156 ~d~~~~~~~~v~~lk~~~~D~VI~lsH~G~~~~~~~--~~~~~~~~~lA~~~~~~giD~IigGHsH~~~ 222 (285)
T cd07405 156 RPPIHEAKEVVPELKQEKPDIVIAATHMGHYDNGEH--GSNAPGDVEMARALPAGGLDLIVGGHSQDPV 222 (285)
T ss_pred cCHHHHHHHHHHHHHHcCCCEEEEEecccccCCccc--cccCchHHHHHHhcCCCCCCEEEeCCCCccc
Confidence 112222333333332236678999999886432210 1110111233333333589999999999854
No 77
>PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=98.30 E-value=1.4e-05 Score=91.50 Aligned_cols=184 Identities=17% Similarity=0.142 Sum_probs=96.0
Q ss_pred CCeEEEEEecCCCCCCh----HHHHHHhhcCCCCeEee-cCccccCCCChhhHHHHhhhhhhhhcCCCeeecCCCcccCC
Q 012895 146 FPIEFAIVGDLGQTEWT----NSTLDHVGSKDYDVFLL-PGDLSYADFQQPLWDSFGRLVEPYASSRPWMVTEGNHEIES 220 (454)
Q Consensus 146 ~~~~f~~igD~~~~~~~----~~~l~~i~~~~pd~vl~-~GDl~y~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~ 220 (454)
..++|++++|+|..... ...++++++.+|+.+++ +||++..... ..+......++.+..--.-+.++||||+..
T Consensus 659 ~~l~Il~~nD~Hg~l~g~~r~~~~i~~~r~~~~~~l~ld~GD~~~gs~~-~~~~~g~~~~~~ln~lg~d~~~~GNHEfd~ 737 (1163)
T PRK09419 659 WELTILHTNDFHGHLDGAAKRVTKIKEVKEENPNTILVDAGDVYQGSLY-SNLLKGLPVLKMMKEMGYDASTFGNHEFDW 737 (1163)
T ss_pred eEEEEEEEeecccCCCCHHHHHHHHHHHHhhCCCeEEEecCCCCCCcch-hhhcCChHHHHHHhCcCCCEEEeccccccc
Confidence 45999999999954322 34566667778998766 9999865432 111111122233322233466999999964
Q ss_pred CCCCCcchhhhhhhhcc------------CCCC-------CCCC---CCCceEEEEeCeE--EEEEecccCC--CC-C--
Q 012895 221 IPIILPHAFKAYNARWL------------MPYE-------ESGS---SSNLYYSFDIAGA--HIIMLGSYTD--FD-E-- 271 (454)
Q Consensus 221 ~~~~~~~~~~~~~~~~~------------~p~~-------~~~~---~~~~~ys~~~g~v--~fi~Lds~~~--~~-~-- 271 (454)
... .+..+.+... .|.- ..+. .-..|.-++.+++ -||++-+... .. .
T Consensus 738 g~~----~l~~~l~~~~~~~~~~~~~~~~fp~l~aNv~~~~~~~~~~~~~py~I~e~~G~kIgiiGltt~~~~~~~~p~~ 813 (1163)
T PRK09419 738 GPD----VLPDWLKGGGDPKNRHQFEKPDFPFVASNIYVKKTGKLVSWAKPYILVEVNGKKVGFIGLTTPETAYKTSPGN 813 (1163)
T ss_pred ChH----HHHHHHHhcccccccccccCCCCCEEEEEEEeCCCCccccccCCEEEEEECCEEEEEEEecccccccccCCCC
Confidence 432 2222211111 1110 0111 0124556678884 4566643210 00 0
Q ss_pred -----CHHHHHHHHHHHHhhc-cCCCCeEEEEEccccccCCCCCCCCcHHHHHHHHHHHHhc-CCcEEEecccccce
Q 012895 272 -----DSAQYKWLKADLAKIN-RKKTPWIFVLLHAPWYNTNTAHQGEGESMRNSMEELLYNA-RVDVVFAGHVHAYE 341 (454)
Q Consensus 272 -----~~~Q~~WL~~~L~~~~-~~~~~w~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~-~v~lvl~GH~H~y~ 341 (454)
-....+.+++..++.+ .++.+.+|++.|......... .+ ....++.++. +||++|.||.|..-
T Consensus 814 ~~~l~f~d~~e~~~~~v~~Lr~~~~~D~VV~LsH~G~~~d~~~--~~-----~~~~~lA~~v~gIDvIigGHsH~~~ 883 (1163)
T PRK09419 814 VKNLEFKDPAEAAKKWVKELKEKEKVDAIIALTHLGSNQDRTT--GE-----ITGLELAKKVKGVDAIISAHTHTLV 883 (1163)
T ss_pred cCCcEEcCHHHHHHHHHHHHHhhcCCCEEEEEecCCccccccc--cc-----cHHHHHHHhCCCCCEEEeCCCCccc
Confidence 0122334444444443 236778999999886432111 11 1223344443 69999999999843
No 78
>TIGR00282 metallophosphoesterase, MG_246/BB_0505 family. A member of this family from Mycoplasma Pneumoniae has been crystallized and described as a novel phosphatase.
Probab=98.27 E-value=5.9e-05 Score=71.38 Aligned_cols=190 Identities=21% Similarity=0.272 Sum_probs=102.3
Q ss_pred eEEEEEecCCCCCChH----HHHHHhh-cCCCCeEeecCccccCC-CChhhHHHHhhhhhhhhc-CCCeeecCCCcccCC
Q 012895 148 IEFAIVGDLGQTEWTN----STLDHVG-SKDYDVFLLPGDLSYAD-FQQPLWDSFGRLVEPYAS-SRPWMVTEGNHEIES 220 (454)
Q Consensus 148 ~~f~~igD~~~~~~~~----~~l~~i~-~~~pd~vl~~GDl~y~~-~~~~~~~~~~~~~~~l~~-~~P~~~v~GNHD~~~ 220 (454)
+|++++||.-.. ..+ ..+..++ +.++||++..||++-.+ +... +..+.+.. .+-++ +.|||+++.
T Consensus 1 m~ilfiGDi~G~-~Gr~~l~~~L~~lk~~~~~D~vIaNgEn~~gG~Gi~~------~~~~~L~~~GvDvi-T~GNH~~Dk 72 (266)
T TIGR00282 1 IKFLFIGDVYGK-AGRKIVKNNLPQLKSKYQADLVIANGENTTHGKGLTL------KIYEFLKQSGVNYI-TMGNHTWFQ 72 (266)
T ss_pred CeEEEEEecCCH-HHHHHHHHHHHHHHHhCCCCEEEEcCcccCCCCCCCH------HHHHHHHhcCCCEE-EccchhccC
Confidence 589999998432 223 3444454 56799999999998543 1111 12222222 25565 459999964
Q ss_pred CCCCCcchhhhhhhhccCCCCC-CCCCCCceEEEEeCeEEEEEecccC-CCC-C--CHHHHHHHHHHHHhhccCCCCeEE
Q 012895 221 IPIILPHAFKAYNARWLMPYEE-SGSSSNLYYSFDIAGAHIIMLGSYT-DFD-E--DSAQYKWLKADLAKINRKKTPWIF 295 (454)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~p~~~-~~~~~~~~ys~~~g~v~fi~Lds~~-~~~-~--~~~Q~~WL~~~L~~~~~~~~~w~I 295 (454)
.... ....... +.-.|.+- .+..+..|..++.++.++-+++-.. .+. . ...-.+-+++.+++.+. +++.+|
T Consensus 73 ge~~--~~i~~~~-~~lrpanyp~~~pG~g~~i~~~nG~kiaVinl~G~~fm~~~~~~~Pf~~~d~~i~~lk~-~~d~II 148 (266)
T TIGR00282 73 KLIL--DVVINQK-DLVRPLNFDTSFAGKGSLVFEFNGAKIAVTNLQGTSVNLPFKTTNPFKVLKELINMLKK-DCDLIF 148 (266)
T ss_pred cHHH--HHHhccc-cccccCCCCCCCCCCCcEEEEECCEEEEEEECCCcccCCccccCCHHHHHHHHHHhhhc-CCCEEE
Confidence 3210 0011111 11112211 1122345666788876665555311 111 1 11223335555555443 466799
Q ss_pred EEEccccccCCCCCCCCcHHHHHHHHHHHHhcCCcEEEecccccceeeecccCCCcCCCCcEEEE-ECCCCC
Q 012895 296 VLLHAPWYNTNTAHQGEGESMRNSMEELLYNARVDVVFAGHVHAYERFTRIYDNKADPCGPIYIT-IGDGGN 366 (454)
Q Consensus 296 v~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~y~r~~~~~~~~~~~~g~~yi~-~G~gG~ 366 (454)
|.+|.-. ... +.....+-+.+|++|+.-|+|..---.++. |+|+.|++ +|.-|.
T Consensus 149 Vd~Haea-----------tsE-K~a~~~~ldg~vsaVvGtHtHV~TaD~~il-----~~gtayitD~Gm~G~ 203 (266)
T TIGR00282 149 VDFHAET-----------TSE-KNAFGMAFDGYVTAVVGTHTHVPTADLRIL-----PKGTAYITDVGMTGP 203 (266)
T ss_pred EEeCCCC-----------HHH-HHHHHHHhCCCccEEEeCCCCCCCCcceeC-----CCCCEEEecCCcccC
Confidence 9999642 112 444566677899999999999843222222 57899987 354444
No 79
>PRK11439 pphA serine/threonine protein phosphatase 1; Provisional
Probab=98.23 E-value=2.9e-06 Score=78.66 Aligned_cols=73 Identities=21% Similarity=0.121 Sum_probs=48.0
Q ss_pred EECCCCCCCeEEEEEecCCCCCC-hHHHHHHhhcC-CCCeEeecCccccCCCChhhHHHHhhhhhhhhcCCCeeecCCCc
Q 012895 139 FKMPPANFPIEFAIVGDLGQTEW-TNSTLDHVGSK-DYDVFLLPGDLSYADFQQPLWDSFGRLVEPYASSRPWMVTEGNH 216 (454)
Q Consensus 139 F~T~p~~~~~~f~~igD~~~~~~-~~~~l~~i~~~-~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNH 216 (454)
|+..+...--|++++||+|.... ..++++.+... +.|-++++||+++.+.... +.++.+.. ..++.+.|||
T Consensus 8 ~~~~~~~~~~ri~vigDIHG~~~~L~~lL~~i~~~~~~D~li~lGDlvDrGp~s~------~vl~~l~~-~~~~~v~GNH 80 (218)
T PRK11439 8 YQRIAGHQWRHIWLVGDIHGCFEQLMRKLRHCRFDPWRDLLISVGDLIDRGPQSL------RCLQLLEE-HWVRAVRGNH 80 (218)
T ss_pred eecccCCCCCeEEEEEcccCCHHHHHHHHHhcCCCcccCEEEEcCcccCCCcCHH------HHHHHHHc-CCceEeeCch
Confidence 44444334448999999997643 34566666533 6899999999998765432 22222222 3467899999
Q ss_pred cc
Q 012895 217 EI 218 (454)
Q Consensus 217 D~ 218 (454)
|.
T Consensus 81 E~ 82 (218)
T PRK11439 81 EQ 82 (218)
T ss_pred HH
Confidence 97
No 80
>PRK09968 serine/threonine-specific protein phosphatase 2; Provisional
Probab=98.18 E-value=4.1e-06 Score=77.56 Aligned_cols=64 Identities=19% Similarity=0.239 Sum_probs=43.6
Q ss_pred eEEEEEecCCCCCC-hHHHHHHhh-cCCCCeEeecCccccCCCChhhHHHHhhhhhhhhcCCCeeecCCCccc
Q 012895 148 IEFAIVGDLGQTEW-TNSTLDHVG-SKDYDVFLLPGDLSYADFQQPLWDSFGRLVEPYASSRPWMVTEGNHEI 218 (454)
Q Consensus 148 ~~f~~igD~~~~~~-~~~~l~~i~-~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~ 218 (454)
-|++++||+|.... .+++++.+. ..+.|.++++||+++.+.... +.++.+.. ..++.+.||||.
T Consensus 15 ~ri~visDiHg~~~~l~~~l~~~~~~~~~d~l~~lGD~vdrG~~~~------~~l~~l~~-~~~~~v~GNHE~ 80 (218)
T PRK09968 15 RHIWVVGDIHGEYQLLQSRLHQLSFCPETDLLISVGDNIDRGPESL------NVLRLLNQ-PWFISVKGNHEA 80 (218)
T ss_pred CeEEEEEeccCCHHHHHHHHHhcCCCCCCCEEEECCCCcCCCcCHH------HHHHHHhh-CCcEEEECchHH
Confidence 38999999997643 234555554 457899999999998665432 22222222 357789999997
No 81
>cd07407 MPP_YHR202W_N Saccharomyces cerevisiae YHR202W and related proteins, N-terminal metallophosphatase domain. YHR202W is an uncharacterized Saccharomyces cerevisiae UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at
Probab=98.18 E-value=4.7e-05 Score=73.25 Aligned_cols=179 Identities=17% Similarity=0.209 Sum_probs=88.2
Q ss_pred CCeEEEEEecCCCCCC----------h----HHHHHHhh----cCCCC-eEeecCccccCCCChh----hHHHHhhhhhh
Q 012895 146 FPIEFAIVGDLGQTEW----------T----NSTLDHVG----SKDYD-VFLLPGDLSYADFQQP----LWDSFGRLVEP 202 (454)
Q Consensus 146 ~~~~f~~igD~~~~~~----------~----~~~l~~i~----~~~pd-~vl~~GDl~y~~~~~~----~~~~~~~~~~~ 202 (454)
..++|++.+|+|.... . ...++.++ +.+++ ++|..||++....... .+....+.+.
T Consensus 4 ~~ltILhtnD~Hg~l~~~~~~~~~~~~~gg~a~~i~~~~~~~~~~~~~~Llld~GD~~qGs~~~~~~~~~g~~~~~~mN- 82 (282)
T cd07407 4 GDINFLHTTDTHGWLGGHLNDPNYSADWGDFASFVEHMREKADQKGVDLLLVDTGDLHDGNGLSDASPPPGSYSNPIFR- 82 (282)
T ss_pred ceEEEEEEcccccCCcCcCCcccccCCHHHHHHHHHHHHHHHHhcCCCEEEEeCCCccCCeeceeeecCCChHHHHHHH-
Confidence 5689999999985321 0 12233332 34565 5677999987543311 1222222332
Q ss_pred hhcCCCe-eecCCCcccCCCCCCCcchhhhhhhhccCCCCC------CC--C---CCCceEEEEeC-eEE--EEEecccC
Q 012895 203 YASSRPW-MVTEGNHEIESIPIILPHAFKAYNARWLMPYEE------SG--S---SSNLYYSFDIA-GAH--IIMLGSYT 267 (454)
Q Consensus 203 l~~~~P~-~~v~GNHD~~~~~~~~~~~~~~~~~~~~~p~~~------~~--~---~~~~~ys~~~g-~v~--fi~Lds~~ 267 (454)
..++ ++++||||+...... ...+..+.+....|.-. .. . ....|.-++.+ +++ ||++-+..
T Consensus 83 ---~mgyDa~tlGNHEFd~g~~~-l~~l~~~~~~~~fp~l~aNi~~~~~~~~~~~~~~~y~i~~~~~G~kIgiiGltt~~ 158 (282)
T cd07407 83 ---MMPYDLLTIGNHELYNYEVA-DDEYEGFVPSWGDRYLTSNVDITDDSGLLVPIGSRYRKFTTKHGLRVLAFGFLFDF 158 (282)
T ss_pred ---hcCCcEEeecccccCccccH-HHHHHHHHhhcCCCEEEEEEEEeCCCCcccccccceEEEEcCCCcEEEEEEEeccc
Confidence 2333 468999999533210 00111122222222110 00 0 11235556665 644 56553321
Q ss_pred C-------CCCC--HHHHHHHHHHHHhhccCCCCeEEEEEccccccCCCCCCCCcHHHHHHHHHHHHhc-CCc-EEEecc
Q 012895 268 D-------FDED--SAQYKWLKADLAKINRKKTPWIFVLLHAPWYNTNTAHQGEGESMRNSMEELLYNA-RVD-VVFAGH 336 (454)
Q Consensus 268 ~-------~~~~--~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~-~v~-lvl~GH 336 (454)
. +... ..+.+|+.+.|++. +.+.+|+++|....... ...+....+.++. ++| ++|.||
T Consensus 159 ~~~~~~~~f~d~~~~~~~~~v~~~l~~~---~~DvIIvlsH~G~~~d~--------~~~~~~~~la~~~~~id~~Ii~GH 227 (282)
T cd07407 159 KGAANGVTVQPVADVVQEPWFQDAINNE---DVDLILVLGHMPVRDDA--------EFKVLHDAIRKIFPDTPIQFLGGH 227 (282)
T ss_pred ccCCCCcEEcCHHHHHHHHHHHHHHHhc---CCCEEEEEeCCCCCCCc--------cHHHHHHHHHHhCCCCCEEEEeCC
Confidence 1 0111 12234777777632 56779999998753220 1111122333344 467 799999
Q ss_pred cccc
Q 012895 337 VHAY 340 (454)
Q Consensus 337 ~H~y 340 (454)
.|..
T Consensus 228 sH~~ 231 (282)
T cd07407 228 SHVR 231 (282)
T ss_pred cccc
Confidence 9974
No 82
>COG0737 UshA 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases [Nucleotide transport and metabolism]
Probab=98.09 E-value=7.9e-05 Score=78.26 Aligned_cols=182 Identities=16% Similarity=0.117 Sum_probs=99.0
Q ss_pred CCCeEEEEEecCCCCCC------------h----HHHHHHhhcC-CCCeEeecCccccCCCChhh---HHHHhhhhhhhh
Q 012895 145 NFPIEFAIVGDLGQTEW------------T----NSTLDHVGSK-DYDVFLLPGDLSYADFQQPL---WDSFGRLVEPYA 204 (454)
Q Consensus 145 ~~~~~f~~igD~~~~~~------------~----~~~l~~i~~~-~pd~vl~~GDl~y~~~~~~~---~~~~~~~~~~l~ 204 (454)
...++|++.+|+|..-. . ...++++++. +..++|.+||++........ .....+.+..+
T Consensus 24 ~~~l~ilhtnD~H~~l~~~~~~~~~~~~~g~~~~~~~v~~~ra~~~~~llld~GD~~~G~~l~~~~~~g~~~~~~mN~m- 102 (517)
T COG0737 24 TVKLTILHTNDLHGHLEPYDYDDDGDTDGGLARIATLVKQLRAENKNVLLLDAGDLIQGSPLSDYLTKGEPTVDLLNAL- 102 (517)
T ss_pred ceeEEEEEeccccccceeccccccCcccccHHHHHHHHHHHHhhcCCeEEEeCCcccCCccccccccCCChHHHHHhhc-
Confidence 56799999999986543 1 1234455444 44678889999976443221 11122222222
Q ss_pred cCCCeeecCCCcccCCCCCCCcchhhhhhhhccCCCC------C--CC-CCCCceEEEEeCe--EEEEEecccC--CC--
Q 012895 205 SSRPWMVTEGNHEIESIPIILPHAFKAYNARWLMPYE------E--SG-SSSNLYYSFDIAG--AHIIMLGSYT--DF-- 269 (454)
Q Consensus 205 ~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~p~~------~--~~-~~~~~~ys~~~g~--v~fi~Lds~~--~~-- 269 (454)
-.=+.+.||||+..... .+..+.+....|.- . .. ..-..|.-++.++ +-+|++.+.. .+
T Consensus 103 --~yDa~tiGNHEFd~g~~----~l~~~~~~~~fp~l~aNv~~~~~~~~~~~~Py~I~~~~g~KIgiIG~~~~~~~~~~~ 176 (517)
T COG0737 103 --GYDAMTLGNHEFDYGLE----ALARLLDEAKFPVLSANVYDKNSTGPPFFKPYAIKEVGGVKIGIIGLTTPTIPTWEK 176 (517)
T ss_pred --CCcEEeecccccccCHH----HHHHHHhccCCceEEeeeEecCCCCccCcCCeEEEecCCeEEEEEEecCCccccccc
Confidence 23356999999965422 22333333333311 0 00 1124577788888 4566665411 11
Q ss_pred -C-----CCHHHHHHHHHHHHhhccCCCCeEEEEEccccccCCCCCCCCcHHHHHHHHHHHHhcCCcEEEeccccc
Q 012895 270 -D-----EDSAQYKWLKADLAKINRKKTPWIFVLLHAPWYNTNTAHQGEGESMRNSMEELLYNARVDVVFAGHVHA 339 (454)
Q Consensus 270 -~-----~~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~ 339 (454)
. .-....+++++.+.+.+.++.+.+|++.|.+............ ....... .++|+++.||.|.
T Consensus 177 ~~~~~~~~f~d~~e~~~~~i~elk~~~vD~iI~LsH~G~~~d~~~~~~~~-~~~~~~~-----~~iD~i~~GH~H~ 246 (517)
T COG0737 177 PNAIEGVTFRDPIEAAKKYIPELKGEGVDVIIALSHLGIEDDLELASEVP-GDVDVAV-----PGIDLIIGGHSHT 246 (517)
T ss_pred ccccCCcEEcCHHHHHHHHHHHHHhcCCCEEEEEeccCcCcccccccccc-ccccccc-----cCcceEeccCCcc
Confidence 1 1134567777777776654467799999998754422111100 0000000 3499999999996
No 83
>cd07380 MPP_CWF19_N Schizosaccharomyces pombe CWF19 and related proteins, N-terminal metallophosphatase domain. CWF19 cell cycle control protein (also known as CWF19-like 1 (CWF19L1) in Homo sapiens), N-terminal metallophosphatase domain. CWF19 contains C-terminal domains similar to that found in the CwfJ cell cycle control protein. The metallophosphatase domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site
Probab=98.07 E-value=1.4e-05 Score=69.16 Aligned_cols=118 Identities=17% Similarity=0.132 Sum_probs=73.9
Q ss_pred EEEecCCCCCChHHHHHHhh-----cCCCCeEeecCccccCCCChhhHHHHhhhhhhhhcCCCeeecCCCcccCCCCCCC
Q 012895 151 AIVGDLGQTEWTNSTLDHVG-----SKDYDVFLLPGDLSYADFQQPLWDSFGRLVEPYASSRPWMVTEGNHEIESIPIIL 225 (454)
Q Consensus 151 ~~igD~~~~~~~~~~l~~i~-----~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~~~ 225 (454)
+++||.+.. ..++++.++ +...|++|.+||+.-.......|..+.. ......+|.|++-|||+
T Consensus 1 LV~G~~~G~--l~~~~~kv~~~~~k~gpFd~~ic~Gdff~~~~~~~~~~~y~~--g~~~~pipTyf~ggn~~-------- 68 (150)
T cd07380 1 LVCGDVNGR--LKALFEKVNTINKKKGPFDALLCVGDFFGDDEDDEELEAYKD--GSKKVPIPTYFLGGNNP-------- 68 (150)
T ss_pred CeeecCCcc--HHHHHHHHHHHhcccCCeeEEEEecCccCCccchhhHHHHhc--CCccCCCCEEEECCCCC--------
Confidence 478888754 344444442 5678999999999865443333333322 12223489999999997
Q ss_pred cchhhhhhhhccCCCCCCCCCCCceEEEEeCeEEEEEecccCCCCCCHHHHHHHHHHHHhhccCCCCeEEEEEccccccC
Q 012895 226 PHAFKAYNARWLMPYEESGSSSNLYYSFDIAGAHIIMLGSYTDFDEDSAQYKWLKADLAKINRKKTPWIFVLLHAPWYNT 305 (454)
Q Consensus 226 ~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~Lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~ 305 (454)
+.-|+++|.|++..
T Consensus 69 ------------------------------------------------------------------~~DILlTh~wP~gi 82 (150)
T cd07380 69 ------------------------------------------------------------------GVDILLTSEWPKGI 82 (150)
T ss_pred ------------------------------------------------------------------CCCEEECCCCchhh
Confidence 12478888887654
Q ss_pred CCCCCC-----CcHHHHHHHHHHHHhcCCcEEEeccccc-ceeeeccc
Q 012895 306 NTAHQG-----EGESMRNSMEELLYNARVDVVFAGHVHA-YERFTRIY 347 (454)
Q Consensus 306 ~~~~~~-----~~~~~~~~l~~ll~~~~v~lvl~GH~H~-y~r~~~~~ 347 (454)
...... ........+.+++++.++.+.||||.|. |||. |..
T Consensus 83 ~~~~~~~~~~~~~~~GS~~i~~l~~~lkPrYhf~gh~~~fyer~-Pf~ 129 (150)
T cd07380 83 SKLSKVPFEETLLICGSDLIAELAKKLKPRYHFAGLEGVFYERE-PYR 129 (150)
T ss_pred hhhCCCcccccccCCCCHHHHHHHHHcCCCeEeecCCCceEeec-Ccc
Confidence 211100 0112346777888899999999999995 5653 443
No 84
>PRK09558 ushA bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor; Reviewed
Probab=97.98 E-value=0.00015 Score=76.71 Aligned_cols=189 Identities=16% Similarity=0.192 Sum_probs=89.3
Q ss_pred CCCeEEEEEecCCCCCCh-----------HHHHHHhhc----CCC-CeEeecCccccCCCChhhHHHHhhhhhhhhcCCC
Q 012895 145 NFPIEFAIVGDLGQTEWT-----------NSTLDHVGS----KDY-DVFLLPGDLSYADFQQPLWDSFGRLVEPYASSRP 208 (454)
Q Consensus 145 ~~~~~f~~igD~~~~~~~-----------~~~l~~i~~----~~p-d~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~~~P 208 (454)
...++|++++|+|..... ...++++++ ..+ -++|.+||++..... ..+..-...++-+..--.
T Consensus 32 ~~~ltil~tnD~Hg~~~~~~~~~~G~a~~a~~i~~~r~~~~~~~~~~l~ldaGD~~~Gs~~-s~~~~g~~~i~~mN~~g~ 110 (551)
T PRK09558 32 TYKITILHTNDHHGHFWRNEYGEYGLAAQKTLVDQIRKEVAAEGGSVLLLSGGDINTGVPE-SDLQDAEPDFRGMNLIGY 110 (551)
T ss_pred ceEEEEEEecccCCCccccccCCccHHHHHHHHHHHHHHhhccCCCEEEEcCCccccceEh-hhhcCCchhHHHHhcCCC
Confidence 457899999999875321 123444432 234 467889999864321 111111111121222122
Q ss_pred eeecCCCcccCCCCCCCcchhhhhhhhccCCCC-------CCCC-CCCceEEEEeCeEE--EEEecccCC--C-CC----
Q 012895 209 WMVTEGNHEIESIPIILPHAFKAYNARWLMPYE-------ESGS-SSNLYYSFDIAGAH--IIMLGSYTD--F-DE---- 271 (454)
Q Consensus 209 ~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~p~~-------~~~~-~~~~~ys~~~g~v~--fi~Lds~~~--~-~~---- 271 (454)
=+.++||||+..... .+..+......|.- ..+. .-..|.-++.++++ ||++-+... + ..
T Consensus 111 Da~tlGNHEFD~G~~----~L~~~~~~a~fp~l~aNv~~~~~g~~~~~py~i~~~~G~kIgiiG~~t~~~~~~~~~~~~~ 186 (551)
T PRK09558 111 DAMAVGNHEFDNPLS----VLRKQEKWAKFPFLSANIYQKSTGERLFKPYAIFDRQGLKIAVIGLTTEDTAKIGNPEYFT 186 (551)
T ss_pred CEEcccccccCcCHH----HHHHhhccCCCCEEEEEEEECCCCCcccCCeEEEEECCEEEEEEEEeccccccccCCCCcC
Confidence 345789999965422 22222222122211 0011 11345557888855 555533111 1 00
Q ss_pred ---CHHHHHHHHHHHHhhcc-CCCCeEEEEEccccccCCCCCCCCcHHHHHHHHHHHHhcCCcEEEecccccc
Q 012895 272 ---DSAQYKWLKADLAKINR-KKTPWIFVLLHAPWYNTNTAHQGEGESMRNSMEELLYNARVDVVFAGHVHAY 340 (454)
Q Consensus 272 ---~~~Q~~WL~~~L~~~~~-~~~~w~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~y 340 (454)
-....+-+++..++.+. ++.+.+|++.|......... .........+.+-+...+||++|.||.|..
T Consensus 187 ~~~f~d~~e~a~~~v~~Lk~~~~~D~IV~LsH~G~~~~~~~--~~~~~~d~~la~~~~~~~IDvIlgGHsH~~ 257 (551)
T PRK09558 187 DIEFRDPAEEAKKVIPELKQTEKPDVIIALTHMGHYDDGEH--GSNAPGDVEMARSLPAGGLDMIVGGHSQDP 257 (551)
T ss_pred CceECCHHHHHHHHHHHHHhccCCCEEEEEeccccccCCcc--CCCCccHHHHHHhCCccCceEEEeCCCCcc
Confidence 01122233333333331 36778999999886432211 000001122222222237999999999974
No 85
>TIGR01530 nadN NAD pyrophosphatase/5'-nucleotidase NadN. This model describes NadN of Haemophilus influenzae and a small number of close homologs in pathogenic, Gram-negative bacteria. NadN is a periplasmic enzyme that cleaves NAD (nicotinamide adenine dinucleotide) to NMN (nicotinamide mononucleotide) and AMP. The NMN must be converted by a 5'-nucleotidase to nicotinamide riboside for import. NadN belongs a large family of 5'-nucleotidases and has NMN 5'-nucleotidase activity for NMN, AMP, etc.
Probab=97.94 E-value=0.00016 Score=76.36 Aligned_cols=174 Identities=16% Similarity=0.140 Sum_probs=86.4
Q ss_pred eEEEEEecCCCCCC------------------h----HHHHHHhhcCCC-CeEeecCccccCCCChhhHHHHhhhhhhhh
Q 012895 148 IEFAIVGDLGQTEW------------------T----NSTLDHVGSKDY-DVFLLPGDLSYADFQQPLWDSFGRLVEPYA 204 (454)
Q Consensus 148 ~~f~~igD~~~~~~------------------~----~~~l~~i~~~~p-d~vl~~GDl~y~~~~~~~~~~~~~~~~~l~ 204 (454)
++|++++|+|..-. . ...++++++..+ -++|.+||++...... .+..-...++-+.
T Consensus 1 ltILhtND~Hg~l~~~~~~~~~~~~~~~~~~gG~a~l~~~i~~~r~~~~n~l~ldaGD~~~gs~~~-~~~~g~~~i~~~N 79 (550)
T TIGR01530 1 LSIIHINDHHSHLEPEELEIALAGEQLKAAIGGFAALNAEINKLRAESKNALVLHAGDAIIGTLYF-TLFGGRADAALMN 79 (550)
T ss_pred CEEEEEccccccccCcccccccCCCccccccCCHHHHHHHHHHHHhhCCCeEEEECCCCCCCccch-hhcCCHHHHHHHh
Confidence 47888889875310 0 123455554444 4778899998654321 1111111122222
Q ss_pred cCCCeeecCCCcccCCCCCCCcchhhhhhhhccCCCCC------CCC----CCCceEEEEeCe--EEEEEecccCC-C--
Q 012895 205 SSRPWMVTEGNHEIESIPIILPHAFKAYNARWLMPYEE------SGS----SSNLYYSFDIAG--AHIIMLGSYTD-F-- 269 (454)
Q Consensus 205 ~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~p~~~------~~~----~~~~~ys~~~g~--v~fi~Lds~~~-~-- 269 (454)
.---=+.++||||+..... .+..+.+....|.-. ... .-..|.-+++++ +-||+|.+... .
T Consensus 80 ~~g~Da~~lGNHEFd~G~~----~l~~~~~~~~fp~l~aNv~~~~~~~~~~~~~p~~i~~~~g~kIgiiGl~~~~~~~~~ 155 (550)
T TIGR01530 80 AAGFDFFTLGNHEFDAGNE----GLKEFLEPLEIPVLSANVIPDAASILHGKWKPSAIFERAGEKIAIIGLDTVKKTVES 155 (550)
T ss_pred ccCCCEEEeccccccCCHH----HHHHHHHhCCCCEEEEeeecCCCcccccCcCceEEEEECCeEEEEEEeecCcccccc
Confidence 2223456899999965432 233332222222210 000 113455677887 56777754210 0
Q ss_pred -CCC-----HHHHHHHHHHHHhhccCCCCeEEEEEccccccCCCCCCCCcHHHHHHHHHHHHh-cCCcEEEecccccce
Q 012895 270 -DED-----SAQYKWLKADLAKINRKKTPWIFVLLHAPWYNTNTAHQGEGESMRNSMEELLYN-ARVDVVFAGHVHAYE 341 (454)
Q Consensus 270 -~~~-----~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~-~~v~lvl~GH~H~y~ 341 (454)
... ....+=+++..++.+.++.+.+|++.|..... .. .+.++ .+||++|.||.|..-
T Consensus 156 ~~~~~~~~f~d~~~~~~~~v~~Lk~~g~D~II~lsH~g~~~------------d~---~la~~~~~iD~IigGHsH~~~ 219 (550)
T TIGR01530 156 SSPGKDIKFIDEIAAAQIAANALKQQGINKIILLSHAGFEK------------NC---EIAQKINDIDVIVSGDSHYLL 219 (550)
T ss_pred cCCCCceEECCHHHHHHHHHHHHHhCCCCEEEEEecCCcHH------------HH---HHHhcCCCCCEEEeCCCCccc
Confidence 010 11222233333333333567799999975310 01 22333 379999999999853
No 86
>cd08162 MPP_PhoA_N Synechococcus sp. strain PCC 7942 PhoA and related proteins, N-terminal metallophosphatase domain. Synechococcus sp. strain PCC 7942 PhoA is a large atypical alkaline phosphatase. It is known to be transported across the inner cytoplasmic membrane and into the periplasmic space. In vivo inactivation of the gene encoding PhoA leads to a loss of extracellular, phosphate-regulated phosphatase activity, but does not appear to affect the cells capacity for phosphate uptake. PhoA may play a role in scavenging phosphate during growth of Synechococcus sp. strain PCC 7942 in its natural environment. PhoA belongs to a domain family which includes the bacterial enzyme UshA and several other related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly relat
Probab=97.90 E-value=0.00018 Score=70.33 Aligned_cols=71 Identities=11% Similarity=0.011 Sum_probs=38.7
Q ss_pred eEEEEEecCCCCCC----h---HHHHHHhhcC----C-CCeEeecCccccCCCChhh----------HHHHhhhhhhhhc
Q 012895 148 IEFAIVGDLGQTEW----T---NSTLDHVGSK----D-YDVFLLPGDLSYADFQQPL----------WDSFGRLVEPYAS 205 (454)
Q Consensus 148 ~~f~~igD~~~~~~----~---~~~l~~i~~~----~-pd~vl~~GDl~y~~~~~~~----------~~~~~~~~~~l~~ 205 (454)
++|++.+|+|.... . ..+++++++. . .-++|.+||++........ .....+++..+.
T Consensus 1 l~IlhtnD~Hg~~~~~gg~ar~a~~i~~~r~~~~~~~~~~l~ldaGD~~qGs~~~~~~~~~~~~~~~G~~~i~~mN~~g- 79 (313)
T cd08162 1 LQLLHTSDGESGLLAEDDAPNFSALVNALKDEAAAEYDNTLTLSSGDNFIPGPFFNASLDPLIYGDPGRADILILNALG- 79 (313)
T ss_pred CeEEEecccccCccccCCHHHHHHHHHHHHHhhhccCCCeEEEecCccccCchhhhhhccccccccCChHHHHHHhccC-
Confidence 57899999987532 1 1235555432 3 3478899999864332111 111112222221
Q ss_pred CCCeeecCCCcccCCC
Q 012895 206 SRPWMVTEGNHEIESI 221 (454)
Q Consensus 206 ~~P~~~v~GNHD~~~~ 221 (454)
. =+.++||||+...
T Consensus 80 -~-Da~tlGNHEFD~G 93 (313)
T cd08162 80 -V-QAIALGNHEFDLG 93 (313)
T ss_pred -C-cEEeccccccccC
Confidence 2 2458999999654
No 87
>cd07391 MPP_PF1019 Pyrococcus furiosus PF1019 and related proteins, metallophosphatase domain. This family includes bacterial and archeal proteins homologous to PF1019, an uncharacterized Pyrococcus furiosus protein. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for pro
Probab=97.81 E-value=2.6e-05 Score=69.45 Aligned_cols=52 Identities=13% Similarity=0.161 Sum_probs=33.8
Q ss_pred HHhhcCCCCeEeecCccccCCCCh--hhHHHHhhhhhhhhcCCCeeecCCCcccC
Q 012895 167 DHVGSKDYDVFLLPGDLSYADFQQ--PLWDSFGRLVEPYASSRPWMVTEGNHEIE 219 (454)
Q Consensus 167 ~~i~~~~pd~vl~~GDl~y~~~~~--~~~~~~~~~~~~l~~~~P~~~v~GNHD~~ 219 (454)
+.+.+.+||.++++||+++..... ..+.... ........+|+++++||||..
T Consensus 35 ~~~~~~~~d~lii~GDl~~~~~~~~~~~~~~~~-~~~~~~~~~~v~~i~GNHD~~ 88 (172)
T cd07391 35 RLIEEYGPERLIILGDLKHSFGGLSRQEFEEVA-FLRLLAKDVDVILIRGNHDGG 88 (172)
T ss_pred HHHHhcCCCEEEEeCcccccccccCHHHHHHHH-HHHhccCCCeEEEEcccCccc
Confidence 334578999999999999754321 1122211 222333458999999999983
No 88
>PHA02239 putative protein phosphatase
Probab=97.73 E-value=5.5e-05 Score=70.70 Aligned_cols=69 Identities=13% Similarity=0.194 Sum_probs=44.6
Q ss_pred eEEEEEecCCCCCC-hHHHHHHhhcC--CCCeEeecCccccCCCChhhHHHHhhhhhhhhcCCCeeecCCCccc
Q 012895 148 IEFAIVGDLGQTEW-TNSTLDHVGSK--DYDVFLLPGDLSYADFQQPLWDSFGRLVEPYASSRPWMVTEGNHEI 218 (454)
Q Consensus 148 ~~f~~igD~~~~~~-~~~~l~~i~~~--~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~ 218 (454)
+|++++||+|.... ..++++.+... ..|.++++||+++.+.... +.+..+++.+....++++++||||.
T Consensus 1 m~~~~IsDIHG~~~~l~~ll~~i~~~~~~~d~li~lGD~iDrG~~s~--~v~~~l~~~~~~~~~~~~l~GNHE~ 72 (235)
T PHA02239 1 MAIYVVPDIHGEYQKLLTIMDKINNERKPEETIVFLGDYVDRGKRSK--DVVNYIFDLMSNDDNVVTLLGNHDD 72 (235)
T ss_pred CeEEEEECCCCCHHHHHHHHHHHhhcCCCCCEEEEecCcCCCCCChH--HHHHHHHHHhhcCCCeEEEECCcHH
Confidence 47899999996432 23455555432 3599999999998665422 2222222322233679999999997
No 89
>KOG2310 consensus DNA repair exonuclease MRE11 [Replication, recombination and repair]
Probab=97.71 E-value=6.1e-05 Score=75.58 Aligned_cols=45 Identities=22% Similarity=0.197 Sum_probs=34.4
Q ss_pred CCCeEEEEEecCCCCCCh-------------HHHHHHhhcCCCCeEeecCccccCCCC
Q 012895 145 NFPIEFAIVGDLGQTEWT-------------NSTLDHVGSKDYDVFLLPGDLSYADFQ 189 (454)
Q Consensus 145 ~~~~~f~~igD~~~~~~~-------------~~~l~~i~~~~pd~vl~~GDl~y~~~~ 189 (454)
...+||++..|.|.+... .+++.-+.+.+.|+||..||++..+.+
T Consensus 11 entirILVaTD~HlGY~EkD~vrg~DSf~tFeEIl~iA~e~~VDmiLlGGDLFHeNkP 68 (646)
T KOG2310|consen 11 ENTIRILVATDNHLGYGEKDAVRGDDSFVTFEEILEIAQENDVDMILLGGDLFHENKP 68 (646)
T ss_pred ccceEEEEeecCccccccCCcccccchHHHHHHHHHHHHhcCCcEEEecCcccccCCc
Confidence 567999999999987531 234444458899999999999987655
No 90
>TIGR00024 SbcD_rel_arch putative phosphoesterase, SbcD/Mre11-related. Members of this uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11. SbcD is a subunit of the SbcCD nuclease of E. coli that can cleave DNA hairpins to unblock stalled DNA replication. All members of this family are archaeal.
Probab=97.70 E-value=7.1e-05 Score=69.49 Aligned_cols=69 Identities=17% Similarity=0.263 Sum_probs=48.4
Q ss_pred eEEEEEecCCCCCCh--------------HHHHHHh----hcCCCCeEeecCccccCCCChhhHHHHhhhhhhhhcCCCe
Q 012895 148 IEFAIVGDLGQTEWT--------------NSTLDHV----GSKDYDVFLLPGDLSYADFQQPLWDSFGRLVEPYASSRPW 209 (454)
Q Consensus 148 ~~f~~igD~~~~~~~--------------~~~l~~i----~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~~~P~ 209 (454)
-+.++++|+|.+... .++++.+ ...+||.||++||+.+.......|..+.++++.+. .++
T Consensus 15 ~~~LvisDlHLG~~~~~~~~Gi~~P~~~~~~~l~rl~~li~~~~~d~vIi~GDl~h~~~~~~~~~~~~~~l~~~~--~~v 92 (225)
T TIGR00024 15 GDKAVIADLHLGFERHLDEQGVMVPGFQFREIIERALSIADKYGIEALIINGDLKHEFKKGLEWRFIREFIEVTF--RDL 92 (225)
T ss_pred cCeEEEEeccCCCHHHHHhcCCcCChhHHHHHHHHHHHHHhhcCCCEEEEcCccccccCChHHHHHHHHHHHhcC--CcE
Confidence 457899999986421 1344444 46789999999999975544344555555555443 589
Q ss_pred eecCCCccc
Q 012895 210 MVTEGNHEI 218 (454)
Q Consensus 210 ~~v~GNHD~ 218 (454)
+.++||||.
T Consensus 93 ~~V~GNHD~ 101 (225)
T TIGR00024 93 ILIRGNHDA 101 (225)
T ss_pred EEECCCCCC
Confidence 999999997
No 91
>PRK11907 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=97.66 E-value=0.0019 Score=70.43 Aligned_cols=184 Identities=16% Similarity=0.096 Sum_probs=90.1
Q ss_pred CCCeEEEEEecCCCCCCh-----------------HHHHHHhhcCCCC-eEeecCccccCCCChhhHH-----------H
Q 012895 145 NFPIEFAIVGDLGQTEWT-----------------NSTLDHVGSKDYD-VFLLPGDLSYADFQQPLWD-----------S 195 (454)
Q Consensus 145 ~~~~~f~~igD~~~~~~~-----------------~~~l~~i~~~~pd-~vl~~GDl~y~~~~~~~~~-----------~ 195 (454)
...+||+..+|+|..-.. ...++++++..+. ++|..||++.......... .
T Consensus 113 ~~~LtIL~TnDiHg~l~~~dy~~~~~~~~~GlaRlAtlI~~~Rae~~NtLllD~GD~iQGSpl~~~~a~~~~~~~g~~~P 192 (814)
T PRK11907 113 TVDVRILSTTDLHTNLVNYDYYQDKPSQTLGLAKTAVLIEEAKKENPNVVLVDNGDTIQGTPLGTYKAIVDPVEEGEQHP 192 (814)
T ss_pred ceEEEEEEEEeecCCcccccccccCccccccHHHHHHHHHHHHHhCCCEEEEecCCCCCCCcccchhhhccccccCcchH
Confidence 346999999999865210 1245555545454 6788999997544321100 0
Q ss_pred HhhhhhhhhcCCCeeecCCCcccCCCCCCCcchhhhhhhhccCCCCC-------CCC-CCCceEEEEe-----Ce-----
Q 012895 196 FGRLVEPYASSRPWMVTEGNHEIESIPIILPHAFKAYNARWLMPYEE-------SGS-SSNLYYSFDI-----AG----- 257 (454)
Q Consensus 196 ~~~~~~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~p~~~-------~~~-~~~~~ys~~~-----g~----- 257 (454)
..+.|..+ --=..++||||+..... .+..+.+....|.-. .+. .-..|.-++. ++
T Consensus 193 ~i~amN~L---GyDA~tLGNHEFDyG~d----~L~~~l~~a~fPvl~ANV~~~~~~~~~~~PY~I~e~~~~d~~G~~~~v 265 (814)
T PRK11907 193 MYAALEAL---GFDAGTLGNHEFNYGLD----YLEKVIATANMPIVNANVLDPTTGDFLYTPYTIVTKTFTDTEGKKVTL 265 (814)
T ss_pred HHHHHhcc---CCCEEEechhhcccCHH----HHHHHHHhCCCCEEEeeeeecCCCCccCCCeEEEEEEEecCCCcccce
Confidence 11222222 22356899999965432 222222222223210 010 0122333433 33
Q ss_pred -EEEEEecccC--CCCC--------CHHHHHHHHHHHHhhccCCCCeEEEEEccccccCCCCCCCCcHHHHHHHHHHHHh
Q 012895 258 -AHIIMLGSYT--DFDE--------DSAQYKWLKADLAKINRKKTPWIFVLLHAPWYNTNTAHQGEGESMRNSMEELLYN 326 (454)
Q Consensus 258 -v~fi~Lds~~--~~~~--------~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~ 326 (454)
+-||++-+.. .|.. -.+-.+.+++...+.+.++.+.+|++.|..+.........++ .-..+.+-
T Consensus 266 KIGiIGlvtp~~~~w~~~~l~g~v~f~D~veaa~~~v~~Lr~~GaDvIIaLsH~G~~~d~~~~~~En-----~~~~LA~v 340 (814)
T PRK11907 266 NIGITGIVPPQILNWDKANLEGKVIVRDAVEAVRDIIPTMRAAGADIVLVLSHSGIGDDQYEVGEEN-----VGYQIASL 340 (814)
T ss_pred EEEEEEeCchhhhhcccccccCCeEECCHHHHHHHHHHHHHhcCCCEEEEEeCCCcccccccccccc-----hhhHHhcC
Confidence 4566663311 1110 022234444544444444678899999987643211111111 11122223
Q ss_pred cCCcEEEecccccc
Q 012895 327 ARVDVVFAGHVHAY 340 (454)
Q Consensus 327 ~~v~lvl~GH~H~y 340 (454)
-+||++|.||.|..
T Consensus 341 ~GIDaIvgGHsH~~ 354 (814)
T PRK11907 341 SGVDAVVTGHSHAE 354 (814)
T ss_pred CCCCEEEECCCCCc
Confidence 47999999999983
No 92
>PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=97.64 E-value=0.0004 Score=79.71 Aligned_cols=186 Identities=16% Similarity=0.142 Sum_probs=91.0
Q ss_pred CCeEEEEEecCCCCCCh-----------------HHHHHHhhcCCCCeEee-cCccccCCCChhhHH----H-----Hhh
Q 012895 146 FPIEFAIVGDLGQTEWT-----------------NSTLDHVGSKDYDVFLL-PGDLSYADFQQPLWD----S-----FGR 198 (454)
Q Consensus 146 ~~~~f~~igD~~~~~~~-----------------~~~l~~i~~~~pd~vl~-~GDl~y~~~~~~~~~----~-----~~~ 198 (454)
..++|+..+|+|..-.. ...++++++..++.+++ .||++...... .|. . ...
T Consensus 40 ~~l~il~tnD~Hg~l~~~~y~~~~~~~~~Glar~at~i~~~r~~~~n~llld~GD~~qGs~l~-~~~~~~~~~~~~~~~~ 118 (1163)
T PRK09419 40 VNIQILATTDLHGNFMDYDYASDKETTGFGLAQTATLIKKARKENPNTLLVDNGDLIQGNPLG-EYAVKDNILFKNKTHP 118 (1163)
T ss_pred eEEEEEEEecccccccccccccCCCCCCcCHHHHHHHHHHHHHhCCCeEEEeCCCccCCChhh-hHHhhhccccCCCcCH
Confidence 35899999999864210 23456666667776555 99999765421 110 0 001
Q ss_pred hhhhhhcCCCeeecCCCcccCCCCCCCcchhhhhhhhccCCCCC------CCC-CCCceEEEEe---------CeEE--E
Q 012895 199 LVEPYASSRPWMVTEGNHEIESIPIILPHAFKAYNARWLMPYEE------SGS-SSNLYYSFDI---------AGAH--I 260 (454)
Q Consensus 199 ~~~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~p~~~------~~~-~~~~~ys~~~---------g~v~--f 260 (454)
.++.+..---=+.++||||+..... .+....+....|.-. .+. .-..|--++. ++++ |
T Consensus 119 ~i~~mN~lgyDa~~lGNHEFd~G~~----~L~~~~~~a~fp~l~aNv~~~~~~~~~~py~I~~~~~~~~~g~~~gvkIgi 194 (1163)
T PRK09419 119 MIKAMNALGYDAGTLGNHEFNYGLD----FLDGTIKGANFPVLNANVKYKNGKNVYTPYKIKEKTVTDENGKKQGVKVGY 194 (1163)
T ss_pred HHHHHhhcCccEEeecccccccCHH----HHHHHHhcCCCCEEEeeeecCCCCcccCCEEEEEEEeeccCCCCCCeEEEE
Confidence 1111211122356899999964322 222222222222210 111 0123444455 5544 5
Q ss_pred EEecccC--CCC----CC----HHHHHHHHHHHHhhccCCCCeEEEEEccccccCCCCCCCCcHHHHHHHHHHHHh-cCC
Q 012895 261 IMLGSYT--DFD----ED----SAQYKWLKADLAKINRKKTPWIFVLLHAPWYNTNTAHQGEGESMRNSMEELLYN-ARV 329 (454)
Q Consensus 261 i~Lds~~--~~~----~~----~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~-~~v 329 (454)
|++-+.. .|. .+ ..-.+=+++.+.+.++++++.+|++.|...-...... + ......++.++ -+|
T Consensus 195 iG~~~p~~~~~~~~~~~g~~~~~d~v~~~~~~v~~lk~~gaDvII~l~H~G~~~~~~~~-~----~en~~~~la~~~~gI 269 (1163)
T PRK09419 195 IGFVPPQIMTWDKKNLKGKVEVKNIVEEANKTIPEMKKGGADVIVALAHSGIESEYQSS-G----AEDSVYDLAEKTKGI 269 (1163)
T ss_pred EecCCcchhhcchhhccCcEEECCHHHHHHHHHHHHHhcCCCEEEEEeccCcCCCCCCC-C----cchHHHHHHHhCCCC
Confidence 5553311 011 01 1112223344444433467889999998864322111 1 11233344444 379
Q ss_pred cEEEecccccce
Q 012895 330 DVVFAGHVHAYE 341 (454)
Q Consensus 330 ~lvl~GH~H~y~ 341 (454)
|+++.||.|...
T Consensus 270 D~Il~GHsH~~~ 281 (1163)
T PRK09419 270 DAIVAGHQHGLF 281 (1163)
T ss_pred cEEEeCCCcccc
Confidence 999999999853
No 93
>COG1311 HYS2 Archaeal DNA polymerase II, small subunit/DNA polymerase delta, subunit B [DNA replication, recombination, and repair]
Probab=97.63 E-value=0.00076 Score=67.62 Aligned_cols=76 Identities=11% Similarity=0.218 Sum_probs=54.9
Q ss_pred CCCeEEEEEecCCCCCCh------HHHHHHhh-----cCCCCeEeecCccccCCCC-------------hhhHHHHhhhh
Q 012895 145 NFPIEFAIVGDLGQTEWT------NSTLDHVG-----SKDYDVFLLPGDLSYADFQ-------------QPLWDSFGRLV 200 (454)
Q Consensus 145 ~~~~~f~~igD~~~~~~~------~~~l~~i~-----~~~pd~vl~~GDl~y~~~~-------------~~~~~~~~~~~ 200 (454)
...++.++++|.|.+... ...++.+. +.+...++.+||+++.-+- ..+|+.+.+++
T Consensus 223 ~e~v~v~~isDih~GSk~F~~~~f~~fi~wl~g~~~~a~~vkyliiagd~VDGigiYpgq~~eL~i~di~~qy~~~A~~L 302 (481)
T COG1311 223 DERVYVALISDIHRGSKEFLEDEFEKFIDWLNGPGDLASRVKYLIIAGDVVDGIGIYPGQEEELVIADIYEQYEELAEFL 302 (481)
T ss_pred CcceEEEEEeeeecccHHHHHHHHHHHHHHhcCCcccccceEEEEEecccccccccccCcccccccccchHHHHHHHHHH
Confidence 577899999999986432 23445553 3456789999999974321 34566777777
Q ss_pred hhhhcCCCeeecCCCcccCC
Q 012895 201 EPYASSRPWMVTEGNHEIES 220 (454)
Q Consensus 201 ~~l~~~~P~~~v~GNHD~~~ 220 (454)
..+...+-++..|||||...
T Consensus 303 ~~vp~~I~v~i~PGnhDa~r 322 (481)
T COG1311 303 DQVPEHIKVFIMPGNHDAVR 322 (481)
T ss_pred hhCCCCceEEEecCCCCccc
Confidence 77777788999999999853
No 94
>PRK09418 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=97.60 E-value=0.0017 Score=70.72 Aligned_cols=56 Identities=27% Similarity=0.293 Sum_probs=30.9
Q ss_pred HHHHHhhccCCCCeEEEEEccccccCCCCCCCCcHHHHHHHHHHHHhc-CCcEEEecccccce
Q 012895 280 KADLAKINRKKTPWIFVLLHAPWYNTNTAHQGEGESMRNSMEELLYNA-RVDVVFAGHVHAYE 341 (454)
Q Consensus 280 ~~~L~~~~~~~~~w~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~-~v~lvl~GH~H~y~ 341 (454)
++.+.+.+.++++.+|++.|..+-..... .. +...... +.+. +||++|.||.|..-
T Consensus 234 ~~~v~~Lr~~GaDvIIaLsH~G~~~d~~~---~~--~ena~~~-l~~v~gID~IlgGHsH~~~ 290 (780)
T PRK09418 234 KKMVPKMKAEGADVIVALAHSGVDKSGYN---VG--MENASYY-LTEVPGVDAVLMGHSHTEV 290 (780)
T ss_pred HHHHHHHHhcCCCEEEEEeccCccccccc---cc--chhhhHH-HhcCCCCCEEEECCCCCcc
Confidence 33333333336778999999875432111 11 1011111 3443 79999999999853
No 95
>PRK00166 apaH diadenosine tetraphosphatase; Reviewed
Probab=97.45 E-value=0.00019 Score=68.66 Aligned_cols=66 Identities=20% Similarity=0.264 Sum_probs=45.2
Q ss_pred eEEEEEecCCCCCCh-HHHHHHhh-cCCCCeEeecCccccCCCChhhHHHHhhhhhhhhcCCCeeecCCCccc
Q 012895 148 IEFAIVGDLGQTEWT-NSTLDHVG-SKDYDVFLLPGDLSYADFQQPLWDSFGRLVEPYASSRPWMVTEGNHEI 218 (454)
Q Consensus 148 ~~f~~igD~~~~~~~-~~~l~~i~-~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~ 218 (454)
+++++|||+|..... ..+++.+. ..+.|.++++||+++.+.... ...+.+..+ ..+++++.||||.
T Consensus 1 M~~~vIGDIHG~~~~l~~ll~~~~~~~~~D~li~lGDlVdrGp~s~---~vl~~l~~l--~~~~~~VlGNHD~ 68 (275)
T PRK00166 1 MATYAIGDIQGCYDELQRLLEKIDFDPAKDTLWLVGDLVNRGPDSL---EVLRFVKSL--GDSAVTVLGNHDL 68 (275)
T ss_pred CcEEEEEccCCCHHHHHHHHHhcCCCCCCCEEEEeCCccCCCcCHH---HHHHHHHhc--CCCeEEEecChhH
Confidence 468999999976432 34566664 357899999999998665422 222333333 2468899999998
No 96
>COG4186 Predicted phosphoesterase or phosphohydrolase [General function prediction only]
Probab=97.41 E-value=0.0023 Score=54.26 Aligned_cols=66 Identities=20% Similarity=0.198 Sum_probs=41.2
Q ss_pred EEEEEecCCCCCCh--------------HHHHHHhh-cCCC-CeEeecCccccCCCChhhHHHHhhhhhhhhcCCCeeec
Q 012895 149 EFAIVGDLGQTEWT--------------NSTLDHVG-SKDY-DVFLLPGDLSYADFQQPLWDSFGRLVEPYASSRPWMVT 212 (454)
Q Consensus 149 ~f~~igD~~~~~~~--------------~~~l~~i~-~~~p-d~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~~~P~~~v 212 (454)
.+-++||+|.+... ..++...+ --+| |.+.++||++...... ..+..++++|... ...+
T Consensus 5 mmyfisDtHfgh~nvi~~~pfsn~~ehd~vil~N~nntv~p~D~lwhLGDl~~~~n~~---~~a~~IlerLnGr--khlv 79 (186)
T COG4186 5 MMYFISDTHFGHKNVISMRPFSNPDEHDEVILSNWNNTVGPDDVLWHLGDLSSGANRE---RAAGLILERLNGR--KHLV 79 (186)
T ss_pred EEEEecccccCCcceeecCCCCCHHHHhHHHHHhHHhcCCccceEEEecccccccchh---hHHHHHHHHcCCc--EEEe
Confidence 35678999876431 22444443 2344 6788999998654432 2345566666544 4789
Q ss_pred CCCcccC
Q 012895 213 EGNHEIE 219 (454)
Q Consensus 213 ~GNHD~~ 219 (454)
+||||-.
T Consensus 80 ~GNhDk~ 86 (186)
T COG4186 80 PGNHDKC 86 (186)
T ss_pred eCCCCCC
Confidence 9999973
No 97
>KOG2863 consensus RNA lariat debranching enzyme [RNA processing and modification]
Probab=97.38 E-value=0.0012 Score=63.39 Aligned_cols=173 Identities=21% Similarity=0.255 Sum_probs=97.2
Q ss_pred eEEEEEecCCCCCCh-HHHHHHhh---cCCCCeEeecCccccCCC--------ChhhHHHHhhhhhh----hhcCCCeee
Q 012895 148 IEFAIVGDLGQTEWT-NSTLDHVG---SKDYDVFLLPGDLSYADF--------QQPLWDSFGRLVEP----YASSRPWMV 211 (454)
Q Consensus 148 ~~f~~igD~~~~~~~-~~~l~~i~---~~~pd~vl~~GDl~y~~~--------~~~~~~~~~~~~~~----l~~~~P~~~ 211 (454)
+|+++-|++|..-+. .+++..+. ..++|++|++||+---.. ....|..+..+.+- +.+.+|.++
T Consensus 1 MrIaVqGCcHG~Ld~iYkti~~~ek~~~tkVDLLlccGDFQavRn~~D~~siavPpKy~~m~~F~~YYsge~~APVlTIF 80 (456)
T KOG2863|consen 1 MRIAVQGCCHGELDNIYKTISLIEKRGNTKVDLLLCCGDFQAVRNEQDLKSIAVPPKYRRMGDFYKYYSGEIKAPVLTIF 80 (456)
T ss_pred CceeeecccchhHHHHHHHHHHHHHcCCCCccEEEEccchHhhcchhhcccccCCHHHHHHHHHHHHhCCcccCceeEEE
Confidence 589999999875332 23444554 358999999999942111 12344443333332 334588899
Q ss_pred cCCCcccCCCCCCCcchhhhhhhhccCCCCCCCCCCCceE-----EEEeCeEEEEEecc---cCCCCC-------CH-H-
Q 012895 212 TEGNHEIESIPIILPHAFKAYNARWLMPYEESGSSSNLYY-----SFDIAGAHIIMLGS---YTDFDE-------DS-A- 274 (454)
Q Consensus 212 v~GNHD~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~y-----s~~~g~v~fi~Lds---~~~~~~-------~~-~- 274 (454)
+=||||..+ |. +.+|+.+-- ..+.|| ...+|++|+-+|.. ..+|.. .. .
T Consensus 81 IGGNHEAsn-----------yL--~eLpyGGwV-ApNIyYlG~agVv~~~gvRIggiSGI~k~~dy~kgh~E~ppyn~st 146 (456)
T KOG2863|consen 81 IGGNHEASN-----------YL--QELPYGGWV-APNIYYLGYAGVVNFGGVRIGGISGIYKEHDYRKGHFEWPPYNNST 146 (456)
T ss_pred ecCchHHHH-----------HH--HhcccCcee-ccceEEeeecceEEECCEEEeeccchhhhhhcccCCCCCCCccchh
Confidence 999999832 11 233442111 124555 36788999988875 112211 00 0
Q ss_pred ------HHHHHHHHHHhhccCCCCeEEEEEccccccCCCCCCCCcH-----------------HHHHHHHHHHHhcCCcE
Q 012895 275 ------QYKWLKADLAKINRKKTPWIFVLLHAPWYNTNTAHQGEGE-----------------SMRNSMEELLYNARVDV 331 (454)
Q Consensus 275 ------Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~~~~~~~~~~-----------------~~~~~l~~ll~~~~v~l 331 (454)
-+..=...|... +.|.-|.+.|.-+-.. .+.++.. -....++++|++.+...
T Consensus 147 iRsiYHvR~~dV~~Lkql---k~piDIfLSHDWP~GI--~~yGd~~~LLr~KPFFrqeie~~~LGSp~~~eLL~~LkP~y 221 (456)
T KOG2863|consen 147 IRSIYHVRISDVAKLKQL---KHPIDIFLSHDWPRGI--YYYGDKKQLLRLKPFFRQEIEEGKLGSPALEELLEDLKPQY 221 (456)
T ss_pred hhhhhhhhhhhhHHHHhh---cCcceEEeecCCCcch--hhcCCHHHHHhcCcHHHHHHhcCCcCChHHHHHHHHhCcch
Confidence 011111233344 3344588888643221 1222211 11357888999999999
Q ss_pred EEeccccc
Q 012895 332 VFAGHVHA 339 (454)
Q Consensus 332 vl~GH~H~ 339 (454)
+|+.|.|.
T Consensus 222 WfsAHLH~ 229 (456)
T KOG2863|consen 222 WFSAHLHV 229 (456)
T ss_pred hhhhhHhh
Confidence 99999997
No 98
>cd07423 MPP_PrpE Bacillus subtilis PrpE and related proteins, metallophosphatase domain. PrpE (protein phosphatase E) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases and a key signal transduction pathway component controlling the expression of spore germination receptors GerA and GerK in Bacillus subtilis. PrpE is closely related to ApaH (also known symmetrical Ap(4)A hydrolase and bis(5'nucleosyl)-tetraphosphatase). PrpE has specificity for phosphotyrosine only, unlike the serine/threonine phosphatases to which it is related. The Bacilli members of this family are single domain proteins while the other members have N- and C-terminal domains in addition to this phosphatase domain. The PPP (phosphoprotein phosphatase) family, to which PrpE belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpA/Prp
Probab=97.36 E-value=0.00027 Score=66.29 Aligned_cols=68 Identities=22% Similarity=0.243 Sum_probs=45.3
Q ss_pred eEEEEEecCCCCCC-hHHHHHHhhc----------CCCCeEeecCccccCCCChhhHHHHhhhhhhhhcCCCeeecCCCc
Q 012895 148 IEFAIVGDLGQTEW-TNSTLDHVGS----------KDYDVFLLPGDLSYADFQQPLWDSFGRLVEPYASSRPWMVTEGNH 216 (454)
Q Consensus 148 ~~f~~igD~~~~~~-~~~~l~~i~~----------~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNH 216 (454)
.|++++||+|.... ..++++.+.. .+.|.++++||+++.+... ....+++..+.....++++.|||
T Consensus 1 ~~i~vigDIHG~~~~L~~ll~~~~~~~~~~~~~~~~~~d~lv~lGDlIDrG~~s---~evl~~l~~l~~~~~~~~v~GNH 77 (234)
T cd07423 1 GPFDIIGDVHGCYDELEELLEKLGYRIKRVGTVTHPEGRRAVFVGDLVDRGPDS---PEVLRLVMSMVAAGAALCVPGNH 77 (234)
T ss_pred CCeEEEEECCCCHHHHHHHHHHcCCccccCccccCCCCCEEEEECCccCCCCCH---HHHHHHHHHHhhCCcEEEEECCc
Confidence 37999999997643 2446666531 1368999999999866532 22334444443334688999999
Q ss_pred cc
Q 012895 217 EI 218 (454)
Q Consensus 217 D~ 218 (454)
|.
T Consensus 78 E~ 79 (234)
T cd07423 78 DN 79 (234)
T ss_pred HH
Confidence 97
No 99
>cd07390 MPP_AQ1575 Aquifex aeolicus AQ1575 and related proteins, metallophosphatase domain. This family includes bacterial and archeal proteins homologous to AQ1575, an uncharacterized Aquifex aeolicus protein. AQ1575 may play an accessory role in DNA repair, based on the close proximity of its gene to Holliday junction resolvasome genes. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a d
Probab=97.31 E-value=0.00034 Score=61.99 Aligned_cols=63 Identities=14% Similarity=0.121 Sum_probs=40.3
Q ss_pred EEEecCCCCCCh----------------HHHHHHhhc--CCCCeEeecCccccCCCChhhHHHHhhhhhhhhcCCCeeec
Q 012895 151 AIVGDLGQTEWT----------------NSTLDHVGS--KDYDVFLLPGDLSYADFQQPLWDSFGRLVEPYASSRPWMVT 212 (454)
Q Consensus 151 ~~igD~~~~~~~----------------~~~l~~i~~--~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~~~P~~~v 212 (454)
.+++|+|.+... ..+++.+.+ .++|.|+++||++........ .+.++.+ ..|++.+
T Consensus 2 ~~isD~Hlg~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~d~vi~~GDl~~~~~~~~~----~~~l~~~--~~~~~~v 75 (168)
T cd07390 2 YFTSDTHFGHANILRFCNRPFDDVEEMDEALIRNWNETVGPDDTVYHLGDFSFGGKAGTE----LELLSRL--NGRKHLI 75 (168)
T ss_pred eEecccccCCHHHHccCCCCCCCHHHHHHHHHHHHhhhcCCCCEEEEeCCCCCCCChHHH----HHHHHhC--CCCeEEE
Confidence 468888876432 123444433 378999999999976543221 2233332 2689999
Q ss_pred CCCcccC
Q 012895 213 EGNHEIE 219 (454)
Q Consensus 213 ~GNHD~~ 219 (454)
+||||..
T Consensus 76 ~GNHD~~ 82 (168)
T cd07390 76 KGNHDSS 82 (168)
T ss_pred eCCCCch
Confidence 9999973
No 100
>PRK13625 bis(5'-nucleosyl)-tetraphosphatase PrpE; Provisional
Probab=97.27 E-value=0.00037 Score=65.75 Aligned_cols=68 Identities=18% Similarity=0.236 Sum_probs=43.9
Q ss_pred eEEEEEecCCCCCCh-HHHHHHhhc---------CCCCeEeecCccccCCCChhhHHHHhhhhhhhhcCCCeeecCCCcc
Q 012895 148 IEFAIVGDLGQTEWT-NSTLDHVGS---------KDYDVFLLPGDLSYADFQQPLWDSFGRLVEPYASSRPWMVTEGNHE 217 (454)
Q Consensus 148 ~~f~~igD~~~~~~~-~~~l~~i~~---------~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD 217 (454)
+|+.++||+|..... .++++.+.. ..-|.++++||+++.+.... ...+.+..+.....++++.||||
T Consensus 1 ~~~~vIGDIHG~~~~L~~lL~~~~~~~~~~~~~~~~~d~li~lGDliDRGp~S~---~vl~~~~~~~~~~~~~~l~GNHE 77 (245)
T PRK13625 1 MKYDIIGDIHGCYQEFQALTEKLGYNWSSGLPVHPDQRKLAFVGDLTDRGPHSL---RMIEIVWELVEKKAAYYVPGNHC 77 (245)
T ss_pred CceEEEEECccCHHHHHHHHHHcCCCcccCcccCCCCCEEEEECcccCCCcChH---HHHHHHHHHhhCCCEEEEeCccH
Confidence 478999999975432 345555432 23478999999998765432 12233333333457899999999
Q ss_pred c
Q 012895 218 I 218 (454)
Q Consensus 218 ~ 218 (454)
.
T Consensus 78 ~ 78 (245)
T PRK13625 78 N 78 (245)
T ss_pred H
Confidence 6
No 101
>cd07387 MPP_PolD2_C PolD2 (DNA polymerase delta, subunit 2), C-terminal domain. PolD2 (DNA polymerase delta, subunit 2) is an auxiliary subunit of the eukaryotic DNA polymerase delta (PolD) complex thought to play a regulatory role and to serve as a scaffold for PolD assembly by interacting simultaneously with all of the other three subunits. PolD2 is catalytically inactive and lacks the active site residues required for phosphoesterase activity in other members of this superfamily. PolD2 is also involved in the recruitment of several proteins regulating DNA metabolism, including p21, PDIP1, PDIP38, PDIP46, and WRN. Human PolD consists of four subunits: p125 (PolD1), p50 (PolD2), p66(PolD3), and p12(PolD4). PolD is one of three major replicases in eukaryotes. PolD also plays an essential role in translesion DNA synthesis, homologous recombination, and DNA repair. Within the PolD complex, PolD2 tightly associates with PolD3. PolD2 belongs to the metallophosphatase (MPP) superfamily
Probab=97.24 E-value=0.0037 Score=58.94 Aligned_cols=133 Identities=14% Similarity=0.173 Sum_probs=74.4
Q ss_pred EEEEecCCCCCChH------HHHHHhh-----------cCCCCeEeecCccccCCCC-------------------hhhH
Q 012895 150 FAIVGDLGQTEWTN------STLDHVG-----------SKDYDVFLLPGDLSYADFQ-------------------QPLW 193 (454)
Q Consensus 150 f~~igD~~~~~~~~------~~l~~i~-----------~~~pd~vl~~GDl~y~~~~-------------------~~~~ 193 (454)
+++++|+|.+.... ..++.+. ..+..-+|++||.+..... ...+
T Consensus 2 i~~vSgL~ig~~~~~~~~l~ll~d~L~G~~g~~~~~~~~s~I~rlIIaGn~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (257)
T cd07387 2 IALVSGLGLGGNAESSLSLQLLVDWLTGQLGDEEEQSSASSIVRLIIAGNSLSKSTQGKDSQTKARYLTKKSSAASVEAV 81 (257)
T ss_pred EEEEcccccCCCccchHHHHHHHHHhcCCCCCccccccccceEEEEEECCcccccccccchhhhhhccccccchhhHHHH
Confidence 67889998765431 2233332 1234569999999975432 2234
Q ss_pred HHHhhhhhhhhcCCCeeecCCCcccCCCCCCCcchhhhhhhhccCCCC-CCCCCCCceEEEEeCeEEEEEecccC-----
Q 012895 194 DSFGRLVEPYASSRPWMVTEGNHEIESIPIILPHAFKAYNARWLMPYE-ESGSSSNLYYSFDIAGAHIIMLGSYT----- 267 (454)
Q Consensus 194 ~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~p~~-~~~~~~~~~ys~~~g~v~fi~Lds~~----- 267 (454)
+.+.+++..+...+|+..+|||||-..... ++..+. ...|+.... .+-..-..-|.|++++++|++.....
T Consensus 82 ~~ld~~l~~l~~~i~V~imPG~~Dp~~~~l-PQqplh--~~lfp~s~~~~~~~~vtNP~~~~i~g~~vLgtsGqni~Di~ 158 (257)
T cd07387 82 KELDNFLSQLASSVPVDLMPGEFDPANHSL-PQQPLH--RCLFPKSSNYSTLNLVTNPYEFSIDGVRVLGTSGQNVDDIL 158 (257)
T ss_pred HHHHHHHHhhhcCCeEEECCCCCCcccccC-CCCCCC--HHHhhcccccCCcEEeCCCeEEEECCEEEEEECCCCHHHHH
Confidence 556677888888899999999999854321 111111 011110000 00000122356899999999987532
Q ss_pred CCCCCHHHHHHHHHHHHh
Q 012895 268 DFDEDSAQYKWLKADLAK 285 (454)
Q Consensus 268 ~~~~~~~Q~~WL~~~L~~ 285 (454)
.+...+.-++.|+..|+-
T Consensus 159 ky~~~~~~l~~me~~L~w 176 (257)
T cd07387 159 KYSSLESRLDILERTLKW 176 (257)
T ss_pred HhCCCCCHHHHHHHHHHh
Confidence 122334446667776653
No 102
>TIGR01390 CycNucDiestase 2',3'-cyclic-nucleotide 2'-phosphodiesterase. 2',3'-cyclic-nucleotide 2'-phosphodiesterase is a bifunctional enzyme localized to the periplasm of Gram-negative bacteria. 2',3'-cyclic-nucleotide 2'-phosphodiesters are intermediates formed during the hydrolysis of RNA by the ribonuclease I, which is also found to the periplasm, and other enzymes of the RNAse T2 family. Bacteria are unable to transport 2',3'-cyclic-nucleotides into the cytoplasm. 2',3'-cyclic-nucleotide 2'-phosphodiesterase contains 2 active sites which catalyze the reactions that convert the 2',3'-cyclic-nucleotide into a 3'-nucleotide, which is then converted into nucleic acid and phosphate. Both final products can be transported into the cytoplasm. Thus, it has been suggested that 2',3'-cyclic-nucleotide 2'-phosphodiesterase has a 'scavenging' function. Experimental evidence indicates that 2',3'-cyclic-nucleotide 2'-phosphodiesterase enables Yersinia enterocolitica O:8 to grow on 2'3'-cAMP as a
Probab=97.22 E-value=0.0058 Score=65.50 Aligned_cols=45 Identities=22% Similarity=0.229 Sum_probs=27.1
Q ss_pred CCCeEEEEEccccccCCCCCCCCcHHHHHHHHHHHHh-cCCcEEEecccccc
Q 012895 290 KTPWIFVLLHAPWYNTNTAHQGEGESMRNSMEELLYN-ARVDVVFAGHVHAY 340 (454)
Q Consensus 290 ~~~w~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~-~~v~lvl~GH~H~y 340 (454)
+.+.+|++.|...-....... . +.....+.+ -+||+++.||.|..
T Consensus 195 gaDvII~LsH~G~~~d~~~~~--~----en~~~~l~~v~gID~Il~GHsH~~ 240 (626)
T TIGR01390 195 GADIIVALAHSGISADPYQPG--A----ENSAYYLTKVPGIDAVLFGHSHAV 240 (626)
T ss_pred CCCEEEEEeccCcCCCccccc--c----chHHHHHhcCCCCCEEEcCCCCcc
Confidence 577899999987643211001 1 111112344 37999999999983
No 103
>PRK09420 cpdB bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein; Reviewed
Probab=97.22 E-value=0.0066 Score=65.28 Aligned_cols=58 Identities=19% Similarity=0.239 Sum_probs=32.3
Q ss_pred HHHHHHHHhhccCCCCeEEEEEccccccCCCCCCCCcHHHHHHHHHHHHh-cCCcEEEecccccc
Q 012895 277 KWLKADLAKINRKKTPWIFVLLHAPWYNTNTAHQGEGESMRNSMEELLYN-ARVDVVFAGHVHAY 340 (454)
Q Consensus 277 ~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~-~~v~lvl~GH~H~y 340 (454)
+-+++...+.+.++.+.+|++.|..+-........+ +.... +.+ -+||+++.||.|..
T Consensus 205 e~a~~~v~~Lk~~gaDvII~LsH~G~~~d~~~~~ae-----n~~~~-l~~v~gID~Il~GHsH~~ 263 (649)
T PRK09420 205 ETARKYVPEMKEKGADIVVAIPHSGISADPYKAMAE-----NSVYY-LSEVPGIDAIMFGHSHAV 263 (649)
T ss_pred HHHHHHHHHHHHcCCCEEEEEecCCcCCCCcccccc-----chhHH-HhcCCCCCEEEeCCCCcc
Confidence 334444444443367889999998763221100111 11112 234 37999999999984
No 104
>cd07413 MPP_PA3087 Pseudomonas aeruginosa PA3087 and related proteins, metallophosphatase domain. PA3087 is an uncharacterized protein from Pseudomonas aeruginosa with a metallophosphatase domain that belongs to the phosphoprotein phosphatase (PPP) family. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of
Probab=97.18 E-value=0.00052 Score=63.71 Aligned_cols=66 Identities=18% Similarity=0.254 Sum_probs=43.2
Q ss_pred EEEEecCCCCCCh-HHHHHHhhcC--------CCCeEeecCccccCCCChhhHHHHhhhhhhhhcCCCeeecCCCccc
Q 012895 150 FAIVGDLGQTEWT-NSTLDHVGSK--------DYDVFLLPGDLSYADFQQPLWDSFGRLVEPYASSRPWMVTEGNHEI 218 (454)
Q Consensus 150 f~~igD~~~~~~~-~~~l~~i~~~--------~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~ 218 (454)
+.+|||+|..... .++++.+... ..|.++++||+++.+.... ...+.+..+...-.++++.||||.
T Consensus 1 ~~vIGDIHG~~~~L~~lL~~i~~~~~~~~~~~~~d~lvflGD~IDRGp~S~---~vl~~l~~l~~~~~~~~l~GNHE~ 75 (222)
T cd07413 1 YDFIGDIHGHAEKLVVLLHKLGYQELSGVYRHPERQVVFLGDLIDRGPEIR---ELLEIVKSMVDAGHALAVMGNHEF 75 (222)
T ss_pred CEEEEeccCCHHHHHHHHHHcCCCccccccCCCCCEEEEeCcccCCCCCHH---HHHHHHHHhhcCCCEEEEEccCcH
Confidence 4689999976432 4456666321 4689999999998765432 223333333333468889999997
No 105
>COG1692 Calcineurin-like phosphoesterase [General function prediction only]
Probab=97.17 E-value=0.06 Score=49.50 Aligned_cols=186 Identities=23% Similarity=0.287 Sum_probs=100.5
Q ss_pred eEEEEEecCCCCCChHHH----HHHhh-cCCCCeEeecCccccCCCChhhHHHHhhhhhhhhcCCCeeecCCCcccCCCC
Q 012895 148 IEFAIVGDLGQTEWTNST----LDHVG-SKDYDVFLLPGDLSYADFQQPLWDSFGRLVEPYASSRPWMVTEGNHEIESIP 222 (454)
Q Consensus 148 ~~f~~igD~~~~~~~~~~----l~~i~-~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~~ 222 (454)
+|++++||+-.. ..+.+ |..++ +.++||||..|-++-.+- .-.|+.+.++++ ..+-+ .+.|||=+....
T Consensus 1 mriLfiGDvvGk-~Gr~~v~~~Lp~lk~kyk~dfvI~N~ENaa~G~-Git~k~y~~l~~---~G~dv-iT~GNH~wd~~e 74 (266)
T COG1692 1 MRILFIGDVVGK-PGRKAVKEHLPQLKSKYKIDFVIVNGENAAGGF-GITEKIYKELLE---AGADV-ITLGNHTWDQKE 74 (266)
T ss_pred CeEEEEecccCc-chHHHHHHHhHHHHHhhcCcEEEEcCccccCCc-CCCHHHHHHHHH---hCCCE-EecccccccchH
Confidence 589999998433 23333 33343 568999999999985432 223444444333 22443 599999985321
Q ss_pred CCCcchhhhhhhhccCCCCCC-CCCCCceEEEEeCeEEEEEecc--cCCCC-CCHHHHHHHHHHHHhhccCCCCeEEEEE
Q 012895 223 IILPHAFKAYNARWLMPYEES-GSSSNLYYSFDIAGAHIIMLGS--YTDFD-EDSAQYKWLKADLAKINRKKTPWIFVLL 298 (454)
Q Consensus 223 ~~~~~~~~~~~~~~~~p~~~~-~~~~~~~ys~~~g~v~fi~Lds--~~~~~-~~~~Q~~WL~~~L~~~~~~~~~w~Iv~~ 298 (454)
.. .+-.-..++--|.|-+ +..+..|+-|...+..+.+.|- ..... .-..-..-+++.|.+.+. +++.+||-+
T Consensus 75 i~---~~i~~~~~ilRP~N~p~~~~G~G~~~f~~ng~ki~V~Nl~Grv~m~~~~d~PF~~~d~l~~~~~~-~~~~iiVDF 150 (266)
T COG1692 75 IL---DFIDNADRILRPANYPDGTPGKGSRIFKINGKKLAVINLMGRVFMPPALDNPFKAADKLLDEIKL-GTDLIIVDF 150 (266)
T ss_pred HH---HHhhcccceeccCCCCCCCCcceEEEEEeCCcEEEEEEeeccccCccccCCHHHHHHHHHHhCcc-CCceEEEEc
Confidence 10 1111112222343321 2345667778887766555543 22111 122334456666666654 456788888
Q ss_pred ccccccCCCCCCCCcHHHHHHHHHHHHhcCCcEEEecccccceeeecccCCCcCCCCcEEEE
Q 012895 299 HAPWYNTNTAHQGEGESMRNSMEELLYNARVDVVFAGHVHAYERFTRIYDNKADPCGPIYIT 360 (454)
Q Consensus 299 H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~y~r~~~~~~~~~~~~g~~yi~ 360 (454)
|.---+ ..++|- ++-+-+|.+|+-=|+|.-..-.++- ++|+.|++
T Consensus 151 HAEtTS-----------EK~a~g-~yldGrvsavvGTHTHV~TaD~rIL-----~~GTayiT 195 (266)
T COG1692 151 HAETTS-----------EKNAFG-WYLDGRVSAVVGTHTHVPTADERIL-----PKGTAYIT 195 (266)
T ss_pred cccchh-----------hhhhhh-eEEcCeEEEEEeccCccccccceec-----CCCcEEEe
Confidence 864211 111111 1223468899999999843222222 57888886
No 106
>cd07421 MPP_Rhilphs Rhilph phosphatases, metallophosphatase domain. Rhilphs (Rhizobiales/ Rhodobacterales/ Rhodospirillaceae-like phosphatases) are a phylogenetically distinct group of PPP (phosphoprotein phosphatases), found only in land plants. They are named for their close relationship to to PPP phosphatases from alpha-Proteobacteria, including Rhizobiales, Rhodobacterales and Rhodospirillaceae. The PPP (phosphoprotein phosphatase) family, to which the Rhilphs belong, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central rol
Probab=97.13 E-value=0.00077 Score=64.24 Aligned_cols=67 Identities=15% Similarity=0.111 Sum_probs=43.1
Q ss_pred EEEEEecCCCCCCh-HHHHHHhhc------CCCCeEeecCccccCCCChhhHHHHhhhhhhhhcCC---CeeecCCCccc
Q 012895 149 EFAIVGDLGQTEWT-NSTLDHVGS------KDYDVFLLPGDLSYADFQQPLWDSFGRLVEPYASSR---PWMVTEGNHEI 218 (454)
Q Consensus 149 ~f~~igD~~~~~~~-~~~l~~i~~------~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~~~---P~~~v~GNHD~ 218 (454)
++.++||+|..... ..+++.+.. ...+.+|++||+++.+..... ..+++..+.... .++++.||||.
T Consensus 3 ~iyaIGDIHG~~d~L~~lL~~I~~d~~~~~~~~~~iVfLGDyVDRGPdS~e---Vld~L~~l~~~~~~~~vv~LrGNHE~ 79 (304)
T cd07421 3 VVICVGDIHGYISKLNNLWLNLQSALGPSDFASALVIFLGDYCDRGPETRK---VIDFLISLPEKHPKQRHVFLCGNHDF 79 (304)
T ss_pred eEEEEEeccCCHHHHHHHHHHhhhhcCcCcCCCcEEEEeCCcCCCCCCHHH---HHHHHHHhhhcccccceEEEecCChH
Confidence 68999999976442 445555532 235689999999987654322 223333333222 47889999995
No 107
>cd07381 MPP_CapA CapA and related proteins, metallophosphatase domain. CapA is one of three membrane-associated enzymes in Bacillus anthracis that is required for synthesis of gamma-polyglutamic acid (PGA), a major component of the bacterial capsule. The YwtB and PgsA proteins of Bacillus subtilis are closely related to CapA and are also included in this alignment model. CapA belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal
Probab=97.06 E-value=0.02 Score=53.76 Aligned_cols=62 Identities=21% Similarity=0.257 Sum_probs=40.0
Q ss_pred HHHHHHHHhhccCCCCeEEEEEccccccCCCCCCCCcHHHHHHHHHHHHhcCCcEEEecccccceeee
Q 012895 277 KWLKADLAKINRKKTPWIFVLLHAPWYNTNTAHQGEGESMRNSMEELLYNARVDVVFAGHVHAYERFT 344 (454)
Q Consensus 277 ~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~y~r~~ 344 (454)
+-+++.+++.+. +.+++|++.|-..-.. .........+...+...++|+|+.||.|..+-..
T Consensus 162 ~~~~~~i~~lr~-~~D~vIv~~H~G~e~~-----~~p~~~~~~la~~l~~~G~D~IiG~H~Hv~q~~E 223 (239)
T cd07381 162 ERIAADIAEAKK-KADIVIVSLHWGVEYS-----YYPTPEQRELARALIDAGADLVIGHHPHVLQGIE 223 (239)
T ss_pred HHHHHHHHHHhh-cCCEEEEEecCcccCC-----CCCCHHHHHHHHHHHHCCCCEEEcCCCCcCCCeE
Confidence 446666666554 3788999999653111 1111233456666667799999999999876544
No 108
>cd00144 MPP_PPP_family phosphoprotein phosphatases of the metallophosphatase superfamily, metallophosphatase domain. The PPP (phosphoprotein phosphatase) family is one of two known protein phosphatase families specific for serine and threonine. This family includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate
Probab=96.95 E-value=0.0011 Score=61.47 Aligned_cols=66 Identities=18% Similarity=0.179 Sum_probs=42.9
Q ss_pred EEEecCCCCCCh-HHHHHHhhcCCCCeEeecCccccCCCChhhHHHHhhhhhhhhc-CCCeeecCCCcccC
Q 012895 151 AIVGDLGQTEWT-NSTLDHVGSKDYDVFLLPGDLSYADFQQPLWDSFGRLVEPYAS-SRPWMVTEGNHEIE 219 (454)
Q Consensus 151 ~~igD~~~~~~~-~~~l~~i~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~-~~P~~~v~GNHD~~ 219 (454)
.++||+|..... .++++.+.....|.+|++||+++.+.... ...+.+..+.. ..+++.+.||||..
T Consensus 1 ~~igDiHg~~~~l~~~l~~~~~~~~d~li~lGD~vdrg~~~~---~~l~~l~~~~~~~~~~~~l~GNHe~~ 68 (225)
T cd00144 1 YVIGDIHGCLDDLLRLLEKIGFPPNDKLIFLGDYVDRGPDSV---EVIDLLLALKILPDNVILLRGNHEDM 68 (225)
T ss_pred CEEeCCCCCHHHHHHHHHHhCCCCCCEEEEECCEeCCCCCcH---HHHHHHHHhcCCCCcEEEEccCchhh
Confidence 379999965322 34555565668999999999998664321 22222222221 24799999999984
No 109
>PF00041 fn3: Fibronectin type III domain; InterPro: IPR003961 Fibronectins are multi-domain glycoproteins found in a soluble form in plasma, and in an insoluble form in loose connective tissue and basement membranes []. They contain multiple copies of 3 repeat regions (types I, II and III), which bind to a variety of substances including heparin, collagen, DNA, actin, fibrin and fibronectin receptors on cell surfaces. The wide variety of these substances means that fibronectins are involved in a number of important functions: e.g., wound healing; cell adhesion; blood coagulation; cell differentiation and migration; maintenance of the cellular cytoskeleton; and tumour metastasis []. The role of fibronectin in cell differentiation is demonstrated by the marked reduction in the expression of its gene when neoplastic transformation occurs. Cell attachment has been found to be mediated by the binding of the tetrapeptide RGDS to integrins on the cell surface [], although related sequences can also display cell adhesion activity. Plasma fibronectin occurs as a dimer of 2 different subunits, linked together by 2 disulphide bonds near the C terminus. The difference in the 2 chains occurs in the type III repeat region and is caused by alternative splicing of the mRNA from one gene []. The observation that, in a given protein, an individual repeat of one of the 3 types (e.g., the first FnIII repeat) shows much less similarity to its subsequent tandem repeats within that protein than to its equivalent repeat between fibronectins from other species, has suggested that the repeating structure of fibronectin arose at an early stage of evolution. It also seems to suggest that the structure is subject to high selective pressure []. The fibronectin type III repeat region is an approximately 100 amino acid domain, different tandem repeats of which contain binding sites for DNA, heparin and the cell surface []. The superfamily of sequences believed to contain FnIII repeats represents 45 different families, the majority of which are involved in cell surface binding in some manner, or are receptor protein tyrosine kinases, or cytokine receptors.; GO: 0005515 protein binding; PDB: 1UEM_A 1TDQ_A 1X5I_A 2IC2_B 2IBG_C 2IBB_A 3R8Q_A 2FNB_A 1FNH_A 2EDB_A ....
Probab=96.87 E-value=0.0079 Score=45.92 Aligned_cols=70 Identities=23% Similarity=0.339 Sum_probs=46.9
Q ss_pred CCeeEEEEecCCCcEEEEEEeCCC----CCccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEEE
Q 012895 53 DPQQVHISLAAKDYIRVSWITDDK----EAESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYYY 128 (454)
Q Consensus 53 ~p~~v~l~~~~~~~~~v~W~t~~~----~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y 128 (454)
+|..+++.....+++.|.|..... ...-.|+|.......... ... .+.-...+.|++|+|+|.|.+
T Consensus 2 ~P~~l~v~~~~~~sv~v~W~~~~~~~~~~~~y~v~~~~~~~~~~~~------~~~----~~~~~~~~~i~~L~p~t~Y~~ 71 (85)
T PF00041_consen 2 APENLSVSNISPTSVTVSWKPPSSGNGPITGYRVEYRSVNSTSDWQ------EVT----VPGNETSYTITGLQPGTTYEF 71 (85)
T ss_dssp SSEEEEEEEECSSEEEEEEEESSSTSSSESEEEEEEEETTSSSEEE------EEE----EETTSSEEEEESCCTTSEEEE
T ss_pred cCcCeEEEECCCCEEEEEEECCCCCCCCeeEEEEEEEecccceeee------eee----eeeeeeeeeeccCCCCCEEEE
Confidence 578888988889999999999941 123466676554332011 111 111233678899999999999
Q ss_pred EeCc
Q 012895 129 RCGG 132 (454)
Q Consensus 129 rv~~ 132 (454)
||..
T Consensus 72 ~v~a 75 (85)
T PF00041_consen 72 RVRA 75 (85)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9874
No 110
>cd07422 MPP_ApaH Escherichia coli ApaH and related proteins, metallophosphatase domain. ApaH (also known as symmetrically cleaving Ap4A hydrolase and bis(5'nucleosyl)-tetraphosphatase) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases that hydrolyzes the nucleotide-signaling molecule diadenosine tetraphosphate (Ap(4)A) into two ADP and also hydrolyzes Ap(5)A, Gp(4)G, and other extending compounds. Null mutations in apaH result in high intracellular levels of Ap(4)A which correlate with multiple phenotypes, including a decreased expression of catabolite-repressible genes, a reduction in the expression of flagellar operons, and an increased sensitivity to UV and heat. Ap4A hydrolase is important in responding to heat shock and oxidative stress via regulating the concentration of Ap4A in bacteria. Ap4A hydrolase is also thought to play a role in siderophore production, but the mechanism by which ApaH interacts with siderophore pathwa
Probab=96.84 E-value=0.0019 Score=61.19 Aligned_cols=63 Identities=21% Similarity=0.233 Sum_probs=43.3
Q ss_pred EEEecCCCCCC-hHHHHHHhh-cCCCCeEeecCccccCCCChhhHHHHhhhhhhhhcCCCeeecCCCccc
Q 012895 151 AIVGDLGQTEW-TNSTLDHVG-SKDYDVFLLPGDLSYADFQQPLWDSFGRLVEPYASSRPWMVTEGNHEI 218 (454)
Q Consensus 151 ~~igD~~~~~~-~~~~l~~i~-~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~ 218 (454)
.+|||+|.... .+++++.+. ..+.|.++++||+++.+.... +..+++..+. ..+..+.||||.
T Consensus 2 yvIGDIHG~~~~L~~LL~~i~~~~~~D~Li~lGDlVdRGp~s~---evl~~l~~l~--~~v~~VlGNHD~ 66 (257)
T cd07422 2 YAIGDIQGCYDELQRLLEKINFDPAKDRLWLVGDLVNRGPDSL---ETLRFVKSLG--DSAKTVLGNHDL 66 (257)
T ss_pred EEEECCCCCHHHHHHHHHhcCCCCCCCEEEEecCcCCCCcCHH---HHHHHHHhcC--CCeEEEcCCchH
Confidence 58999997643 245666665 346899999999998665432 2233333332 368899999998
No 111
>COG5555 Cytolysin, a secreted calcineurin-like phosphatase [Cell motility and secretion]
Probab=96.84 E-value=0.0015 Score=60.72 Aligned_cols=168 Identities=21% Similarity=0.308 Sum_probs=97.1
Q ss_pred CCCeEeecCccccCCCCh-------hhHHHHh----hhhhhhhcCCCeeecCCCcccCCCCCCC-----cchhhhhhhh-
Q 012895 173 DYDVFLLPGDLSYADFQQ-------PLWDSFG----RLVEPYASSRPWMVTEGNHEIESIPIIL-----PHAFKAYNAR- 235 (454)
Q Consensus 173 ~pd~vl~~GDl~y~~~~~-------~~~~~~~----~~~~~l~~~~P~~~v~GNHD~~~~~~~~-----~~~~~~~~~~- 235 (454)
-|--++..||++++.+.+ .++..+. .-+.++.-..|+|.-.||||...+.... .+..+.|-+.
T Consensus 126 ~plGlV~ggDitddgggq~~qprEg~ql~qf~~RYsq~vG~~h~H~PvYvGlgnhdldq~gpph~~DWyRrElrdyve~~ 205 (392)
T COG5555 126 CPLGLVEGGDITDDGGGQSFQPREGNQLKQFELRYSQDVGNIHMHYPVYVGLGNHDLDQKGPPHSLDWYRRELRDYVENY 205 (392)
T ss_pred CceeEEeecceeccCCCcccCccccchhhchHhhhccCCCCceeeeeeEeccCchhhcccCCCCchhHHHHHHHHHHHhh
Confidence 345577788998866541 1111111 1112222348999999999997543210 1112222222
Q ss_pred ------ccCCCCC-CCCCCCceEEEEeCeEEEEEecccCCC-CC-CHHHHHHHHHHHHhhccCCCCeEEEEEccccc--c
Q 012895 236 ------WLMPYEE-SGSSSNLYYSFDIAGAHIIMLGSYTDF-DE-DSAQYKWLKADLAKINRKKTPWIFVLLHAPWY--N 304 (454)
Q Consensus 236 ------~~~p~~~-~~~~~~~~ys~~~g~v~fi~Lds~~~~-~~-~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~--~ 304 (454)
|..|... .-......||+++|+++.+-+-....- .. ...-+-||+.+|........+ ++++.|.-+- +
T Consensus 206 Hr~~vf~Kppvp~atYd~l~d~ySwdwgglhlvh~hrf~Gd~~~ga~sslpwlk~dl~~~aadgrp-v~LfqhyGwdtfs 284 (392)
T COG5555 206 HRSDVFWKPPVPPATYDQLKDRYSWDWGGLHLVHYHRFIGDAEPGANSSLPWLKVDLIYSAADGRP-VYLFQHYGWDTFS 284 (392)
T ss_pred cCcCcccCCCCCcccccccchheeccccceeEEEEeeeccccCCCccccCcceeccceeeccCCCc-eeehhhhCcccee
Confidence 2222111 111235578999999988877653221 11 133467999999876554555 8999998652 2
Q ss_pred CCCC--------CCCC------cHHHHHHHHHHHHhcCCcEEEecccccce
Q 012895 305 TNTA--------HQGE------GESMRNSMEELLYNARVDVVFAGHVHAYE 341 (454)
Q Consensus 305 ~~~~--------~~~~------~~~~~~~l~~ll~~~~v~lvl~GH~H~y~ 341 (454)
+..+ ..+. ....|..|...++-|+|...+.||-|.+.
T Consensus 285 teawdpAsrT~Dd~Gsgaphww~a~er~all~~lqGYNvvg~fhGhkhd~~ 335 (392)
T COG5555 285 TEAWDPASRTLDDTGSGAPHWWPAPERGALLFFLQGYNVVGTFHGHKHDFN 335 (392)
T ss_pred ccccCchhcccccCCCCCCCCCCCCCcchHHHhhcCceeEEeccccccccc
Confidence 2111 0111 12467889999999999999999999853
No 112
>TIGR00668 apaH bis(5'-nucleosyl)-tetraphosphatase (symmetrical). Alternate names include diadenosine-tetraphosphatase and Ap4A hydrolase.
Probab=96.68 E-value=0.0023 Score=60.89 Aligned_cols=65 Identities=23% Similarity=0.263 Sum_probs=44.1
Q ss_pred EEEEEecCCCCCC-hHHHHHHhh-cCCCCeEeecCccccCCCChhhHHHHhhhhhhhhcCCCeeecCCCccc
Q 012895 149 EFAIVGDLGQTEW-TNSTLDHVG-SKDYDVFLLPGDLSYADFQQPLWDSFGRLVEPYASSRPWMVTEGNHEI 218 (454)
Q Consensus 149 ~f~~igD~~~~~~-~~~~l~~i~-~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~ 218 (454)
+..+|||+|.... ...+++++. ....|-++++||+++.+.... ...+++..+. ..+..+.||||.
T Consensus 2 ~~YvIGDIHGc~daL~~LL~~i~f~~~~D~l~~lGDlVdRGP~sl---evL~~l~~l~--~~~~~VlGNHD~ 68 (279)
T TIGR00668 2 ATYLIGDLHGCYDELQALLERVEFDPGQDTLWLTGDLVARGPGSL---EVLRYVKSLG--DAVRLVLGNHDL 68 (279)
T ss_pred cEEEEEcccCCHHHHHHHHHHhCcCCCCCEEEEeCCccCCCCCHH---HHHHHHHhcC--CCeEEEEChhHH
Confidence 5679999997643 356677775 456799999999998765432 1223333332 235689999997
No 113
>PF09587 PGA_cap: Bacterial capsule synthesis protein PGA_cap; InterPro: IPR019079 CapA is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria. Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein [].
Probab=96.55 E-value=0.078 Score=50.14 Aligned_cols=64 Identities=17% Similarity=0.245 Sum_probs=44.8
Q ss_pred HHHHHHHHHHhhccCCCCeEEEEEccccccCCCCCCCCcHHHHHHHHHHHHhcCCcEEEecccccceeee
Q 012895 275 QYKWLKADLAKINRKKTPWIFVLLHAPWYNTNTAHQGEGESMRNSMEELLYNARVDVVFAGHVHAYERFT 344 (454)
Q Consensus 275 Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~y~r~~ 344 (454)
+.+.+.+++++.++ +.+++||+.|--.- +........+++...+-+.++|+|+.+|.|..+-..
T Consensus 169 ~~~~i~~~i~~~r~-~~D~vIv~~HwG~e-----~~~~p~~~q~~~a~~lidaGaDiIiG~HpHv~q~~E 232 (250)
T PF09587_consen 169 GIERIKEDIREARK-KADVVIVSLHWGIE-----YENYPTPEQRELARALIDAGADIIIGHHPHVIQPVE 232 (250)
T ss_pred hHHHHHHHHHHHhc-CCCEEEEEeccCCC-----CCCCCCHHHHHHHHHHHHcCCCEEEeCCCCcccceE
Confidence 45788888888873 78899999997421 111112344556666667899999999999977655
No 114
>COG1407 Predicted ICC-like phosphoesterases [General function prediction only]
Probab=96.50 E-value=0.0055 Score=56.43 Aligned_cols=72 Identities=17% Similarity=0.137 Sum_probs=48.9
Q ss_pred CeEEEEEecCCCCCCh--------------H---HHHH-HhhcCCCCeEeecCccccCCCC--hhhHHHHhhhhhhhhcC
Q 012895 147 PIEFAIVGDLGQTEWT--------------N---STLD-HVGSKDYDVFLLPGDLSYADFQ--QPLWDSFGRLVEPYASS 206 (454)
Q Consensus 147 ~~~f~~igD~~~~~~~--------------~---~~l~-~i~~~~pd~vl~~GDl~y~~~~--~~~~~~~~~~~~~l~~~ 206 (454)
.-+.++++|+|.+... . ..++ -+...+|+-+|++||+-.+-.. ..+|.....+++.+...
T Consensus 19 ~~~~lVvADlHlG~e~~~~r~Gi~lP~~~~~~~~~~l~~ii~~~~p~~lIilGD~KH~~~~~~~~e~~~~~~f~~~~~~~ 98 (235)
T COG1407 19 LGRTLVVADLHLGYEESLARRGINLPRYQTDRILKRLDRIIERYGPKRLIILGDLKHEFGKSLRQEKEEVREFLELLDER 98 (235)
T ss_pred cCcEEEEEecccchhHHHHhcCcccCchhHHHHHHHHHHHHHhcCCCEEEEcCccccccCccccccHHHHHHHHHHhccC
Confidence 3578999999987431 1 2333 2357899999999999875543 34455554555544432
Q ss_pred CCeeecCCCcccC
Q 012895 207 RPWMVTEGNHEIE 219 (454)
Q Consensus 207 ~P~~~v~GNHD~~ 219 (454)
-++++.||||-.
T Consensus 99 -evi~i~GNHD~~ 110 (235)
T COG1407 99 -EVIIIRGNHDNG 110 (235)
T ss_pred -cEEEEeccCCCc
Confidence 599999999984
No 115
>smart00854 PGA_cap Bacterial capsule synthesis protein PGA_cap. This protein is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria. Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein.
Probab=96.45 E-value=0.067 Score=50.19 Aligned_cols=62 Identities=24% Similarity=0.288 Sum_probs=39.0
Q ss_pred HHHHHHHHhhccCCCCeEEEEEccccccCCCCCCCCcHHHHHHHHHHHHhcCCcEEEecccccceeee
Q 012895 277 KWLKADLAKINRKKTPWIFVLLHAPWYNTNTAHQGEGESMRNSMEELLYNARVDVVFAGHVHAYERFT 344 (454)
Q Consensus 277 ~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~y~r~~ 344 (454)
+-+++.+++.+. +.+++|++.|-..-... ........+...+.+.++|+|+.||.|..+...
T Consensus 160 ~~i~~~i~~lr~-~~D~vIv~~H~G~e~~~-----~p~~~~~~~A~~l~~~G~DvIiG~H~H~~~~~e 221 (239)
T smart00854 160 EKILADIARARK-KADVVIVSLHWGVEYQY-----EPTDEQRELAHALIDAGADVVIGHHPHVLQPIE 221 (239)
T ss_pred HHHHHHHHHHhc-cCCEEEEEecCccccCC-----CCCHHHHHHHHHHHHcCCCEEEcCCCCcCCceE
Confidence 335555555544 57889999997642111 111223455555556799999999999977554
No 116
>PF13277 YmdB: YmdB-like protein; PDB: 2CV9_B 2Z06_C.
Probab=96.44 E-value=0.048 Score=50.73 Aligned_cols=177 Identities=21% Similarity=0.281 Sum_probs=85.8
Q ss_pred EEEecCCCCCChHH----HHHHhh-cCCCCeEeecCccccCCCChhhHHHHhhhhhhhhcCCCeeecCCCcccCCCCCCC
Q 012895 151 AIVGDLGQTEWTNS----TLDHVG-SKDYDVFLLPGDLSYADFQQPLWDSFGRLVEPYASSRPWMVTEGNHEIESIPIIL 225 (454)
Q Consensus 151 ~~igD~~~~~~~~~----~l~~i~-~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~~~ 225 (454)
+++||.-.. ...+ .|..++ +.++||||..|.++-.+.- -....+.+++ ...+-+ .+.|||=+...
T Consensus 1 LfiGDIvG~-~Gr~~v~~~Lp~L~~~~~~DfVIaNgENaa~G~G-it~~~~~~L~---~~GvDv-iT~GNH~wdkk---- 70 (253)
T PF13277_consen 1 LFIGDIVGK-PGRRAVKEHLPELKEEYGIDFVIANGENAAGGFG-ITPKIAEELF---KAGVDV-ITMGNHIWDKK---- 70 (253)
T ss_dssp EEE-EBBCH-HHHHHHHHHHHHHGG--G-SEEEEE-TTTTTTSS---HHHHHHHH---HHT-SE-EE--TTTTSST----
T ss_pred CeEEecCCH-HHHHHHHHHHHHHHhhcCCCEEEECCcccCCCCC-CCHHHHHHHH---hcCCCE-EecCcccccCc----
Confidence 478887322 2233 344443 6799999999999854322 1111222221 122555 48999998532
Q ss_pred cchhhhhhh---hccCCCCCC-CCCCCceEEEEeCeEEEEEeccc--CCCCCCHHHHHHHHHHHHhhccCCCCeEEEEEc
Q 012895 226 PHAFKAYNA---RWLMPYEES-GSSSNLYYSFDIAGAHIIMLGSY--TDFDEDSAQYKWLKADLAKINRKKTPWIFVLLH 299 (454)
Q Consensus 226 ~~~~~~~~~---~~~~p~~~~-~~~~~~~ys~~~g~v~fi~Lds~--~~~~~~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H 299 (454)
....|.. +.--|.|-+ +.++..|..++.++.++-++|-. ........-...+++.|++... +.+.+||=.|
T Consensus 71 --ei~~~i~~~~~ilRPaN~p~~~pG~G~~i~~~~g~kv~ViNl~Gr~fm~~~~~PF~~~d~~l~~l~~-~~~~iiVDFH 147 (253)
T PF13277_consen 71 --EIFDFIDKEPRILRPANYPPGTPGRGYRIFEKNGKKVAVINLMGRVFMPPIDCPFRAADRLLEELKE-ETDIIIVDFH 147 (253)
T ss_dssp --THHHHHHH-SSEE--TTS-TT-SSBSEEEEEETTEEEEEEEEE--TTS---S-HHHHHHHHHHH------SEEEEEEE
T ss_pred --HHHHHHhcCCCcEECCCCCCCCCcCcEEEEEECCEEEEEEECcccccCCCCCChHHHHHHHHHhccc-cCCEEEEEee
Confidence 2222222 222344322 34567889999998777777642 2222222334455555555422 6677888888
Q ss_pred cccccCCCCCCCCcHHHHHHHHHHHHhcCCcEEEecccccc---eeeecccCCCcCCCCcEEEE
Q 012895 300 APWYNTNTAHQGEGESMRNSMEELLYNARVDVVFAGHVHAY---ERFTRIYDNKADPCGPIYIT 360 (454)
Q Consensus 300 ~P~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~y---~r~~~~~~~~~~~~g~~yi~ 360 (454)
.= ......+| -.+-.-+|.+|+-=|+|.- +|.. |+|+-||+
T Consensus 148 AE-----------aTSEK~A~-g~~lDGrvsaV~GTHTHVqTaDerIL--------p~GTaYiT 191 (253)
T PF13277_consen 148 AE-----------ATSEKQAM-GWYLDGRVSAVVGTHTHVQTADERIL--------PGGTAYIT 191 (253)
T ss_dssp -S------------HHHHHHH-HHHHBTTBSEEEEESSSS-BS--EE---------TTS-EEES
T ss_pred cC-----------cHHHHHHH-HHHhCCcEEEEEeCCCCccCchhhcc--------CCCCEEEe
Confidence 52 12222333 3345668999999999983 3443 57999986
No 117
>KOG3325 consensus Membrane coat complex Retromer, subunit VPS29/PEP11 [Intracellular trafficking, secretion, and vesicular transport]
Probab=96.18 E-value=0.096 Score=44.22 Aligned_cols=86 Identities=17% Similarity=0.317 Sum_probs=55.1
Q ss_pred HHHHHHHHhcCCcEEEecccccceeeecccCCCcCCCCcEEEEECCCCCCCCcccccCCCCCCCceeeecccCEEEEEEe
Q 012895 318 NSMEELLYNARVDVVFAGHVHAYERFTRIYDNKADPCGPIYITIGDGGNREGLALEFKEPKSPLSMFQESSFGHARLKIL 397 (454)
Q Consensus 318 ~~l~~ll~~~~v~lvl~GH~H~y~r~~~~~~~~~~~~g~~yi~~G~gG~~~~~~~~~~~~~p~~~~~~~~~~G~~~l~v~ 397 (454)
+.|.-+-++..||+.++||+|.++.+.. +|-.||..|++.... ...+ .......|..++|.
T Consensus 97 ~sL~~LaRqldvDILl~G~Th~f~Aye~--------eg~ffvnPGSaTGAf----n~~~-------t~~~~PSFvLmDiq 157 (183)
T KOG3325|consen 97 ESLALLARQLDVDILLTGHTHKFEAYEH--------EGKFFVNPGSATGAF----NVSD-------TDIIVPSFVLMDIQ 157 (183)
T ss_pred HHHHHHHHhcCCcEEEeCCceeEEEEEe--------CCcEEeCCCcccCCC----cccc-------cCCCCCceEEEEec
Confidence 4566666788999999999999988763 577788766653221 1111 11145677888886
Q ss_pred cCCeEEEEEEEecCCCceeeeEEEEEE
Q 012895 398 DETRAHWSWYRNNDSDAVIADEVRLES 424 (454)
Q Consensus 398 ~~~~~~~~~~~~~dg~~~~~D~~~i~~ 424 (454)
..+-..+-|.- -||+ |-.|.+...|
T Consensus 158 g~~~v~YvY~l-idge-VkVdki~ykK 182 (183)
T KOG3325|consen 158 GSTVVTYVYRL-IDGE-VKVDKIEYKK 182 (183)
T ss_pred CCEEEEEEeee-eCCc-EEEEEEEecC
Confidence 55555555433 3666 4577776654
No 118
>cd07416 MPP_PP2B PP2B, metallophosphatase domain. PP2B (calcineurin) is a unique serine/threonine protein phosphatase in its regulation by a second messenger (calcium and calmodulin). PP2B is involved in many biological processes including immune responses, the second messenger cAMP pathway, sodium/potassium ion transport in the nephron, cell cycle progression in lower eukaryotes, cardiac hypertrophy, and memory formation. PP2B is highly conserved from yeast to humans, but is absent from plants. PP2B is a heterodimer consisting of a catalytic subunit (CnA) and a regulatory subunit (CnB); CnB contains four Ca2+ binding motifs referred to as EF hands. The PPP (phosphoprotein phosphatase) family, to which PP2B belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -G
Probab=95.55 E-value=0.021 Score=55.51 Aligned_cols=68 Identities=16% Similarity=0.203 Sum_probs=43.1
Q ss_pred EEEEEecCCCCCCh-HHHHHHhhcCCCCeEeecCccccCCCChhhHHHHhhhhhhhhcCC--CeeecCCCcccC
Q 012895 149 EFAIVGDLGQTEWT-NSTLDHVGSKDYDVFLLPGDLSYADFQQPLWDSFGRLVEPYASSR--PWMVTEGNHEIE 219 (454)
Q Consensus 149 ~f~~igD~~~~~~~-~~~l~~i~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~~~--P~~~v~GNHD~~ 219 (454)
+++++||+|..... .++++.......+-++++||+++.+.... +. ...+..+.-.. -++.+.||||..
T Consensus 44 ~i~ViGDIHG~~~dL~~l~~~~g~~~~~~ylFLGDyVDRG~~s~--Ev-i~lL~~lki~~p~~v~lLRGNHE~~ 114 (305)
T cd07416 44 PVTVCGDIHGQFYDLLKLFEVGGSPANTRYLFLGDYVDRGYFSI--EC-VLYLWALKILYPKTLFLLRGNHECR 114 (305)
T ss_pred CEEEEEeCCCCHHHHHHHHHhcCCCCCceEEEECCccCCCCChH--HH-HHHHHHHHhhcCCCEEEEeCCCcHH
Confidence 58999999966432 33555444455688999999998765422 12 22222332223 478899999984
No 119
>cd07420 MPP_RdgC Drosophila melanogaster RdgC and related proteins, metallophosphatase domain. RdgC (retinal degeneration C) is a vertebrate serine-threonine protein phosphatase that is required to prevent light-induced retinal degeneration. In addition to its catalytic domain, RdgC has two C-terminal EF hands. Homologs of RdgC include the human phosphatases protein phosphatase with EF hands 1 and -2 (PPEF-1 and -2). PPEF-1 transcripts are present at low levels in the retina, PPEF-2 transcripts and PPEF-2 protein are present at high levels in photoreceptors. The PPP (phosphoprotein phosphatase) family, to which RdgC belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all
Probab=95.50 E-value=0.022 Score=55.58 Aligned_cols=69 Identities=16% Similarity=0.154 Sum_probs=41.5
Q ss_pred EEEEEecCCCCCCh-HHHHHHhhcC-CCCeEeecCccccCCCChhhHHHHhhhhhhhhcC--CCeeecCCCcccCC
Q 012895 149 EFAIVGDLGQTEWT-NSTLDHVGSK-DYDVFLLPGDLSYADFQQPLWDSFGRLVEPYASS--RPWMVTEGNHEIES 220 (454)
Q Consensus 149 ~f~~igD~~~~~~~-~~~l~~i~~~-~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~~--~P~~~v~GNHD~~~ 220 (454)
++.++||+|..... ..+++..... .-+.+|++||+++.+...- +.+ .++-.+... --++.+.||||...
T Consensus 52 ~~~vvGDiHG~~~dL~~il~~~g~~~~~~~~lFLGDyVDRG~~s~--Evl-~ll~~lk~~~p~~v~llRGNHE~~~ 124 (321)
T cd07420 52 QVTICGDLHGKLDDLFLIFYKNGLPSPENPYVFNGDFVDRGKRSI--EIL-IILFAFFLVYPNEVHLNRGNHEDHI 124 (321)
T ss_pred CeEEEEeCCCCHHHHHHHHHHcCCCCccceEEEeccccCCCCCcH--HHH-HHHHHHhhcCCCcEEEecCchhhhh
Confidence 68999999976432 2334333222 2367999999999765422 222 222222212 34888999999853
No 120
>smart00156 PP2Ac Protein phosphatase 2A homologues, catalytic domain. Large family of serine/threonine phosphatases, that includes PP1, PP2A and PP2B (calcineurin) family members.
Probab=95.37 E-value=0.029 Score=53.68 Aligned_cols=69 Identities=16% Similarity=0.096 Sum_probs=44.2
Q ss_pred eEEEEEecCCCCCCh-HHHHHHhhcCCCCeEeecCccccCCCChhhHHHHhhhhhhhhcC--CCeeecCCCcccC
Q 012895 148 IEFAIVGDLGQTEWT-NSTLDHVGSKDYDVFLLPGDLSYADFQQPLWDSFGRLVEPYASS--RPWMVTEGNHEIE 219 (454)
Q Consensus 148 ~~f~~igD~~~~~~~-~~~l~~i~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~~--~P~~~v~GNHD~~ 219 (454)
-+++++||+|..... ..+++.+.....+-++++||+++.+.... +. ...+..+.-. ..++.+.||||..
T Consensus 28 ~~i~vvGDiHG~~~~l~~ll~~~~~~~~~~~vfLGD~VDrG~~s~--e~-l~~l~~lk~~~p~~v~llrGNHE~~ 99 (271)
T smart00156 28 APVTVCGDIHGQFDDLLRLFDLNGPPPDTNYVFLGDYVDRGPFSI--EV-ILLLFALKILYPNRVVLLRGNHESR 99 (271)
T ss_pred CCEEEEEeCcCCHHHHHHHHHHcCCCCCceEEEeCCccCCCCChH--HH-HHHHHHHHhcCCCCEEEEeccccHH
Confidence 358999999965432 34555555566788999999998665422 11 1222222222 3578999999984
No 121
>KOG4419 consensus 5' nucleotidase [Nucleotide transport and metabolism]
Probab=95.24 E-value=0.15 Score=52.69 Aligned_cols=182 Identities=20% Similarity=0.182 Sum_probs=87.9
Q ss_pred CCCeEEEEEecCCCCCC--------------hHH---HHHHh-hcCCCCeE-eecCccccCCCChhhHHHHhhhhhhhhc
Q 012895 145 NFPIEFAIVGDLGQTEW--------------TNS---TLDHV-GSKDYDVF-LLPGDLSYADFQQPLWDSFGRLVEPYAS 205 (454)
Q Consensus 145 ~~~~~f~~igD~~~~~~--------------~~~---~l~~i-~~~~pd~v-l~~GDl~y~~~~~~~~~~~~~~~~~l~~ 205 (454)
....+|..-+|+|..-. ..+ .++++ ....+|.+ +-+||+-+..++....+.-...-..+.+
T Consensus 40 ~~~~nf~hTtdthG~~~~h~~~~~~~~~~G~f~~f~~~~k~~a~~~~~dvl~~dtGD~hdGtg~sd~~~~~g~~t~~l~~ 119 (602)
T KOG4419|consen 40 WGQPNFIHTTDTHGWLGSHLRDARYDADFGDFAAFALRMKELADRKGVDVLLVDTGDLHDGTGLSDATDPPGIYTNFLFK 119 (602)
T ss_pred cccccceeeccccccccccccchhhhhhhhhHHHHHHHHHHHHhccCCCEEEEecccccCCceeeeccCCchHHHHHHHh
Confidence 45677888888764321 111 22222 35667765 5599998765542211110011111222
Q ss_pred CCC-eeecCCCcccCCCCCCCcchhhhhhhhccCCCCCC-----------CCCCCceEEEE-eCeEEEEEecccC-----
Q 012895 206 SRP-WMVTEGNHEIESIPIILPHAFKAYNARWLMPYEES-----------GSSSNLYYSFD-IAGAHIIMLGSYT----- 267 (454)
Q Consensus 206 ~~P-~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~p~~~~-----------~~~~~~~ys~~-~g~v~fi~Lds~~----- 267 (454)
..| =..+.||||.+...-. ......|...|..|+-.+ .+....++.|. ..++.+..+..-.
T Consensus 120 ~~~yD~l~lGNHEl~~~~ve-~l~~~~f~~~~k~~~la~Nv~~~~~~~~~~p~~~~~~t~~t~~~~~v~~vG~~~~~f~~ 198 (602)
T KOG4419|consen 120 MMPYDILTLGNHELYQANVE-NLTEEYFLPAWKGPYLASNVQIFDSSNSFVPFGLEYATFLTPHGVVVLAVGFLCASFSG 198 (602)
T ss_pred cCccchhhhcchhhhhhhhh-ccchhhhhhhhccceeecceEEecCchhhccccccceEEeccCceEEEEEEEeeccccc
Confidence 233 3458999999643110 011112444444333211 01123344443 3333333322110
Q ss_pred -CCC------CCHHHHHHHHHHHHhhccCCCCeEEEEEccccccCCCCCCCCcHHHHH-HHHHHHHhc-CCcE-EEeccc
Q 012895 268 -DFD------EDSAQYKWLKADLAKINRKKTPWIFVLLHAPWYNTNTAHQGEGESMRN-SMEELLYNA-RVDV-VFAGHV 337 (454)
Q Consensus 268 -~~~------~~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~~~~~~~~~~~~~~-~l~~ll~~~-~v~l-vl~GH~ 337 (454)
..+ ..-.|.+|-.+.++.- ..+.+|++.|.|.-... .++ .+.++...+ ++++ ||-||.
T Consensus 199 ~~n~~~v~~veei~~~~~~~~m~~~~---~idlii~lgH~~~~~~~---------e~~~~~~~ir~~~p~t~IqviGGHs 266 (602)
T KOG4419|consen 199 AANRTVVVPVEEITQSEWEQDMVNTT---DIDLIIALGHSPVRDDD---------EWKSLHAEIRKVHPNTPIQVIGGHS 266 (602)
T ss_pred cCCCcccccHHHHhccchHHHHhhcc---CccEEEEecccccccch---------hhhhHHHHHhhhCCCCceEEECchh
Confidence 111 1245677888777764 55668899999853221 112 333343334 5677 999999
Q ss_pred cc
Q 012895 338 HA 339 (454)
Q Consensus 338 H~ 339 (454)
|.
T Consensus 267 hi 268 (602)
T KOG4419|consen 267 HI 268 (602)
T ss_pred hh
Confidence 98
No 122
>cd07415 MPP_PP2A_PP4_PP6 PP2A, PP4, and PP6 phosphoprotein phosphatases, metallophosphatase domain. PP2A-like family of phosphoprotein phosphatases (PPP's) including PP4 and PP6. PP2A (Protein phosphatase 2A) is a critical regulator of many cellular activities. PP2A comprises about 1% of total cellular proteins. PP2A, together with protein phosphatase 1 (PP1), accounts for more than 90% of all serine/threonine phosphatase activities in most cells and tissues. The PP2A subunit in addition to having a catalytic domain homologous to PP1, has a unique C-terminal tail, containing a motif that is conserved in the catalytic subunits of all PP2A-like phosphatases including PP4 and PP6, and has an important role in PP2A regulation. The PP2A-like family of phosphatases all share a similar heterotrimeric architecture, that includes: a 65kDa scaffolding subunit (A), a 36kDa catalytic subunit (C), and one of 18 regulatory subunits (B). The PPP (phosphoprotein phosphatase) family, to which PP2
Probab=95.19 E-value=0.028 Score=54.07 Aligned_cols=68 Identities=16% Similarity=0.199 Sum_probs=42.5
Q ss_pred EEEEEecCCCCCCh-HHHHHHhhcCCCCeEeecCccccCCCChhhHHHHhhhhhhhhcC--CCeeecCCCcccC
Q 012895 149 EFAIVGDLGQTEWT-NSTLDHVGSKDYDVFLLPGDLSYADFQQPLWDSFGRLVEPYASS--RPWMVTEGNHEIE 219 (454)
Q Consensus 149 ~f~~igD~~~~~~~-~~~l~~i~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~~--~P~~~v~GNHD~~ 219 (454)
.+.++||+|..... ..+++.......+-+|++||+++.+.... +. ...+..+.-. ..++.+.||||..
T Consensus 43 ~i~vvGDIHG~~~dL~~ll~~~~~~~~~~~lfLGDyVDRG~~s~--ev-l~ll~~lk~~~p~~v~llrGNHE~~ 113 (285)
T cd07415 43 PVTVCGDIHGQFYDLLELFRVGGDPPDTNYLFLGDYVDRGYYSV--ET-FLLLLALKVRYPDRITLLRGNHESR 113 (285)
T ss_pred CEEEEEeCCCCHHHHHHHHHHcCCCCCCeEEEEeEECCCCcCHH--HH-HHHHHHHhhcCCCcEEEEecccchH
Confidence 48899999965432 33455444445678999999998765422 11 1222223222 3589999999974
No 123
>KOG3947 consensus Phosphoesterases [General function prediction only]
Probab=95.12 E-value=0.65 Score=43.59 Aligned_cols=71 Identities=18% Similarity=0.209 Sum_probs=44.1
Q ss_pred CCCeEEEEEecCCCCCChHHHHHHhhcCCCCeEeecCccccCCCChhhHHHHhhhhhhhhcCCCeeecCCCcccCCCC
Q 012895 145 NFPIEFAIVGDLGQTEWTNSTLDHVGSKDYDVFLLPGDLSYADFQQPLWDSFGRLVEPYASSRPWMVTEGNHEIESIP 222 (454)
Q Consensus 145 ~~~~~f~~igD~~~~~~~~~~l~~i~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~~ 222 (454)
..-.||+.++|+|......+ .-..-|+++++||.+.-+-.+ +-..|.+.+-.+.-.. -+++.||||...+.
T Consensus 59 ~~~~r~VcisdtH~~~~~i~-----~~p~gDvlihagdfT~~g~~~-ev~~fn~~~gslph~y-KIVIaGNHELtFd~ 129 (305)
T KOG3947|consen 59 PGYARFVCISDTHELTFDIN-----DIPDGDVLIHAGDFTNLGLPE-EVIKFNEWLGSLPHEY-KIVIAGNHELTFDH 129 (305)
T ss_pred CCceEEEEecCcccccCccc-----cCCCCceEEeccCCccccCHH-HHHhhhHHhccCccee-eEEEeeccceeecc
Confidence 56789999999996543221 135788999999998744332 2223333333222112 35789999997653
No 124
>cd07414 MPP_PP1_PPKL PP1, PPKL (PP1 and kelch-like) enzymes, and related proteins, metallophosphatase domain. PP1 (protein phosphatase type 1) is a serine/threonine phosphatase that regulates many cellular processes including: cell-cycle progression, protein synthesis, muscle contraction, carbohydrate metabolism, transcription and neuronal signaling, through its interaction with at least 180 known targeting proteins. PP1 occurs in all tissues and regulates many pathways, ranging from cell-cycle progression to carbohydrate metabolism. Also included here are the PPKL (PP1 and kelch-like) enzymes including the PPQ, PPZ1, and PPZ2 fungal phosphatases. These PPKLs have a large N-terminal kelch repeat in addition to a C-terminal phosphoesterase domain. The PPP (phosphoprotein phosphatase) family, to which PP1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, Rdg
Probab=95.04 E-value=0.032 Score=53.91 Aligned_cols=68 Identities=21% Similarity=0.292 Sum_probs=42.8
Q ss_pred EEEEEecCCCCCC-hHHHHHHhhcCCCCeEeecCccccCCCChhhHHHHhhhhhhhhcC--CCeeecCCCcccC
Q 012895 149 EFAIVGDLGQTEW-TNSTLDHVGSKDYDVFLLPGDLSYADFQQPLWDSFGRLVEPYASS--RPWMVTEGNHEIE 219 (454)
Q Consensus 149 ~f~~igD~~~~~~-~~~~l~~i~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~~--~P~~~v~GNHD~~ 219 (454)
.++++||+|.... ..++++.......+-+|++||+++.+.... +.+ ..+..+.-. ..++.+.||||..
T Consensus 51 ~i~viGDIHG~~~~L~~l~~~~~~~~~~~~lfLGDyVDRG~~s~--e~i-~ll~~lk~~~p~~i~llrGNHE~~ 121 (293)
T cd07414 51 PLKICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSL--ETI-CLLLAYKIKYPENFFLLRGNHECA 121 (293)
T ss_pred ceEEEEecCCCHHHHHHHHHhcCCCCcceEEEEeeEecCCCCcH--HHH-HHHHHhhhhCCCcEEEEecccchh
Confidence 4889999996543 234555554555678999999998765422 111 122222222 2488899999985
No 125
>cd07418 MPP_PP7 PP7, metallophosphatase domain. PP7 is a plant phosphoprotein phosphatase that is highly expressed in a subset of stomata and thought to play an important role in sensory signaling. PP7 acts as a positive regulator of signaling downstream of cryptochrome blue light photoreceptors. PP7 also controls amplification of phytochrome signaling, and interacts with nucleotidediphosphate kinase 2 (NDPK2), a positive regulator of phytochrome signalling. In addition, PP7 interacts with heat shock transcription factor HSF and up-regulates protective heat shock proteins. PP7 may also play a role in salicylic acid-dependent defense signaling. The PPP (phosphoprotein phosphatase) family, to which PP7 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-,
Probab=94.99 E-value=0.036 Score=55.14 Aligned_cols=70 Identities=20% Similarity=0.209 Sum_probs=41.7
Q ss_pred eEEEEEecCCCCCCh-HHHHHHhhcCCC-CeEeecCccccCCCChhhHHHHhhhhhhhhcC--CCeeecCCCcccCC
Q 012895 148 IEFAIVGDLGQTEWT-NSTLDHVGSKDY-DVFLLPGDLSYADFQQPLWDSFGRLVEPYASS--RPWMVTEGNHEIES 220 (454)
Q Consensus 148 ~~f~~igD~~~~~~~-~~~l~~i~~~~p-d~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~~--~P~~~v~GNHD~~~ 220 (454)
-++.++||+|..... ..+++.+..... +.+|++||+++.+.... +. ..++..+.-. .-++.+.||||...
T Consensus 66 ~~i~VvGDIHG~~~dL~~ll~~~g~~~~~~~ylFLGDyVDRGp~Sl--Ev-l~lL~~lki~~p~~v~lLRGNHE~~~ 139 (377)
T cd07418 66 CEVVVVGDVHGQLHDVLFLLEDAGFPDQNRFYVFNGDYVDRGAWGL--ET-FLLLLSWKVLLPDRVYLLRGNHESKF 139 (377)
T ss_pred CCEEEEEecCCCHHHHHHHHHHhCCCCCCceEEEeccccCCCCChH--HH-HHHHHHHhhccCCeEEEEeeeccccc
Confidence 368999999976432 234444332233 45899999998665422 12 1222223222 34889999999853
No 126
>PTZ00239 serine/threonine protein phosphatase 2A; Provisional
Probab=94.76 E-value=0.048 Score=52.89 Aligned_cols=67 Identities=13% Similarity=0.230 Sum_probs=41.7
Q ss_pred EEEEecCCCCCCh-HHHHHHhhcCCCCeEeecCccccCCCChhhHHHHhhhhhhhhcCC--CeeecCCCcccC
Q 012895 150 FAIVGDLGQTEWT-NSTLDHVGSKDYDVFLLPGDLSYADFQQPLWDSFGRLVEPYASSR--PWMVTEGNHEIE 219 (454)
Q Consensus 150 f~~igD~~~~~~~-~~~l~~i~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~~~--P~~~v~GNHD~~ 219 (454)
+.++||+|..... .++++.+.....+-++++||+++.+.... +. ...+..+.-.. -++.+.||||..
T Consensus 45 i~vvGDIHG~~~~L~~l~~~~~~~~~~~~lfLGDyVDRG~~s~--ev-l~ll~~lk~~~p~~v~llrGNHE~~ 114 (303)
T PTZ00239 45 VNVCGDIHGQFYDLQALFKEGGDIPNANYIFIGDFVDRGYNSV--ET-MEYLLCLKVKYPGNITLLRGNHESR 114 (303)
T ss_pred EEEEEeCCCCHHHHHHHHHhcCCCCCceEEEeeeEcCCCCCHH--HH-HHHHHHhhhcCCCcEEEEecccchH
Confidence 8899999965432 33555444445677999999998765422 11 12222222222 488999999974
No 127
>PTZ00244 serine/threonine-protein phosphatase PP1; Provisional
Probab=94.23 E-value=0.055 Score=52.30 Aligned_cols=67 Identities=19% Similarity=0.326 Sum_probs=41.5
Q ss_pred EEEEecCCCCCCh-HHHHHHhhcCCCCeEeecCccccCCCChhhHHHHhhhhhhh--hcCCCeeecCCCcccC
Q 012895 150 FAIVGDLGQTEWT-NSTLDHVGSKDYDVFLLPGDLSYADFQQPLWDSFGRLVEPY--ASSRPWMVTEGNHEIE 219 (454)
Q Consensus 150 f~~igD~~~~~~~-~~~l~~i~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~l--~~~~P~~~v~GNHD~~ 219 (454)
+.++||+|..... .++++.+.....+-++++||+++.+.... +.+ ..+-.+ .....++.+.||||..
T Consensus 54 ~~ViGDIHG~~~~L~~l~~~~~~~~~~~~lfLGDyVDRG~~s~--evl-~ll~~lk~~~p~~v~llrGNHE~~ 123 (294)
T PTZ00244 54 VRVCGDTHGQYYDLLRIFEKCGFPPYSNYLFLGDYVDRGKHSV--ETI-TLQFCYKIVYPENFFLLRGNHECA 123 (294)
T ss_pred ceeeccCCCCHHHHHHHHHHcCCCCcccEEEeeeEecCCCCHH--HHH-HHHHHHhhccCCeEEEEecccchH
Confidence 7889999965432 34555554445567889999998765422 111 111111 1124588999999974
No 128
>PTZ00480 serine/threonine-protein phosphatase; Provisional
Probab=93.86 E-value=0.085 Score=51.50 Aligned_cols=68 Identities=21% Similarity=0.289 Sum_probs=42.2
Q ss_pred EEEEEecCCCCCC-hHHHHHHhhcCCCCeEeecCccccCCCChhhHHHHhhhhhhhhcC--CCeeecCCCcccC
Q 012895 149 EFAIVGDLGQTEW-TNSTLDHVGSKDYDVFLLPGDLSYADFQQPLWDSFGRLVEPYASS--RPWMVTEGNHEIE 219 (454)
Q Consensus 149 ~f~~igD~~~~~~-~~~~l~~i~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~~--~P~~~v~GNHD~~ 219 (454)
+++++||+|.... ..++++.......+-+|++||+++.+.... +.+ ..+..+.-. ..++.+.||||..
T Consensus 60 ~i~vvGDIHG~~~dL~~l~~~~g~~~~~~ylfLGDyVDRG~~s~--evl-~ll~~lki~~p~~v~llRGNHE~~ 130 (320)
T PTZ00480 60 PLKICGDVHGQYFDLLRLFEYGGYPPESNYLFLGDYVDRGKQSL--ETI-CLLLAYKIKYPENFFLLRGNHECA 130 (320)
T ss_pred CeEEEeecccCHHHHHHHHHhcCCCCcceEEEeceecCCCCCcH--HHH-HHHHHhcccCCCceEEEecccchh
Confidence 4889999996532 233555444445677899999998665421 221 222222222 3488999999984
No 129
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=93.71 E-value=0.26 Score=52.73 Aligned_cols=84 Identities=21% Similarity=0.370 Sum_probs=53.7
Q ss_pred CCCCCee---EEEEecCCCcEEEEEEeCCCCCccE----EEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCC
Q 012895 50 SESDPQQ---VHISLAAKDYIRVSWITDDKEAESV----VEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEP 122 (454)
Q Consensus 50 ~~~~p~~---v~l~~~~~~~~~v~W~t~~~~~~~~----v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p 122 (454)
+..+|.+ +|+.....++++++|.-++.+.... |+|-+.... ..+|.. ...-...++|+||+|
T Consensus 439 ~qa~ps~V~~~r~~~~~~~sitlsW~~p~~png~ildYEvky~ek~~~--------e~~~~~---~~t~~~~~ti~gL~p 507 (996)
T KOG0196|consen 439 NQAAPSPVSVLRQVSRTSDSITLSWSEPDQPNGVILDYEVKYYEKDED--------ERSYST---LKTKTTTATITGLKP 507 (996)
T ss_pred cccCCCccceEEEeeeccCceEEecCCCCCCCCcceeEEEEEeecccc--------ccceeE---EecccceEEeeccCC
Confidence 3445544 5665566899999999998665443 444433211 111111 112345688999999
Q ss_pred CCEEEEEeCc--------cCceeEEECCCC
Q 012895 123 ATTYYYRCGG--------RGPEFSFKMPPA 144 (454)
Q Consensus 123 ~t~Y~Yrv~~--------~s~~~~F~T~p~ 144 (454)
||.|-++|.. -|....|.|.|.
T Consensus 508 ~t~YvfqVRarT~aG~G~~S~~~~fqT~~~ 537 (996)
T KOG0196|consen 508 GTVYVFQVRARTAAGYGPYSGKHEFQTLPS 537 (996)
T ss_pred CcEEEEEEEEecccCCCCCCCceeeeecCc
Confidence 9999999963 367788998774
No 130
>PF04042 DNA_pol_E_B: DNA polymerase alpha/epsilon subunit B; InterPro: IPR007185 DNA polymerase epsilon is essential for cell viability and chromosomal DNA replication in budding yeast. In addition, DNA polymerase epsilon may be involved in DNA repair and cell-cycle checkpoint control. The enzyme consists of at least four subunits in mammalian cells as well as in yeast. The largest subunit of DNA polymerase epsilon is responsible for polymerase activity. In mouse, the DNA polymerase epsilon subunit B is the second largest subunit of the DNA polymerase. A part of the N-terminal was found to be responsible for the interaction with SAP18. Experimental evidence suggests that this subunit may recruit histone deacetylase to the replication fork to modify the chromatin structure [].; GO: 0003677 DNA binding, 0003887 DNA-directed DNA polymerase activity, 0006260 DNA replication; PDB: 3E0J_C 3FLO_G.
Probab=92.68 E-value=0.13 Score=47.10 Aligned_cols=114 Identities=12% Similarity=0.074 Sum_probs=54.3
Q ss_pred EEEEecCCCCCCh--H----HHHHHhh-cCCCCeEeecCccccCCCChh---------hH-----HHHhhhhhhhhcCCC
Q 012895 150 FAIVGDLGQTEWT--N----STLDHVG-SKDYDVFLLPGDLSYADFQQP---------LW-----DSFGRLVEPYASSRP 208 (454)
Q Consensus 150 f~~igD~~~~~~~--~----~~l~~i~-~~~pd~vl~~GDl~y~~~~~~---------~~-----~~~~~~~~~l~~~~P 208 (454)
|++++|.+.+... . +.+..+. ..+|+.+|++|++++...... .. ..+.+.+..+...++
T Consensus 1 Iv~~Sg~~~~~~~~~~~~L~~~l~~~~~~~~p~~lIl~G~fi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 80 (209)
T PF04042_consen 1 IVFASGPFLDSDNLSLEPLRDLLSGVEDASKPDVLILMGPFIDSPHPYISSGSVPDSYSFEEDFLKELDSFLESILPSTQ 80 (209)
T ss_dssp EEEEES--CTTT-HHHHHHHHHHHCCCHCTTECEEEEES-SCBTTSHHHHHT---HHCCHHHHHHHHCHHHHCCCHCCSE
T ss_pred CEEEecCccCCCHhHHHHHHHHHHhccccCCCcEEEEeCCCcCccccccccccccccccccHHHHHHHHHHHhhcccccE
Confidence 5788998877432 2 2334445 778999999999998543211 11 112223344445689
Q ss_pred eeecCCCcccCCCCCCCcchhhhh-hhhccCCCCCCCCCCCceEEEEeCeEEEEEecc
Q 012895 209 WMVTEGNHEIESIPIILPHAFKAY-NARWLMPYEESGSSSNLYYSFDIAGAHIIMLGS 265 (454)
Q Consensus 209 ~~~v~GNHD~~~~~~~~~~~~~~~-~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~Lds 265 (454)
++.+||+||......+++..+... ........ .-.--..-+.+.++++.|.+...
T Consensus 81 vvlvPg~~D~~~~~~lPq~pl~~~~~~~~~~~~--~~~~~sNP~~~~i~~~~i~~~s~ 136 (209)
T PF04042_consen 81 VVLVPGPNDPTSSPVLPQPPLHSKLFPKLKKYS--NIHFVSNPCRISINGQEIGVTSG 136 (209)
T ss_dssp EEEE--TTCTT-S-SCSB----TTTTCHHCTTT--TEEE--CSEEEEETTEEEEE-SS
T ss_pred EEEeCCCccccccCCCCCCCCCHHHHhhhhhcC--ceEEeCCCeEEEEeCCcEEEECC
Confidence 999999999965533322222111 00000000 00000123557888888888764
No 131
>cd07417 MPP_PP5_C PP5, C-terminal metallophosphatase domain. Serine/threonine protein phosphatase-5 (PP5) is a member of the PPP gene family of protein phosphatases that is highly conserved among eukaryotes and widely expressed in mammalian tissues. PP5 has a C-terminal phosphatase domain and an extended N-terminal TPR (tetratricopeptide repeat) domain containing three TPR motifs. The PPP (phosphoprotein phosphatase) family, to which PP5 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cel
Probab=92.66 E-value=0.17 Score=49.44 Aligned_cols=69 Identities=14% Similarity=0.257 Sum_probs=40.4
Q ss_pred eEEEEEecCCCCCCh-HHHHHHhhcC-CCCeEeecCccccCCCChhhHHHHhhhhhhhhc--CCCeeecCCCcccC
Q 012895 148 IEFAIVGDLGQTEWT-NSTLDHVGSK-DYDVFLLPGDLSYADFQQPLWDSFGRLVEPYAS--SRPWMVTEGNHEIE 219 (454)
Q Consensus 148 ~~f~~igD~~~~~~~-~~~l~~i~~~-~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~--~~P~~~v~GNHD~~ 219 (454)
-++.++||+|..... .++++..... .-|-+|++||+++.+.... +.+ ..+-.+.- ..-++.+.||||..
T Consensus 60 ~~~~VvGDIHG~~~dL~~ll~~~g~~~~~~~ylFLGDyVDRG~~S~--Evl-~ll~~lki~~p~~v~lLRGNHE~~ 132 (316)
T cd07417 60 EKITVCGDTHGQFYDLLNIFELNGLPSETNPYLFNGDFVDRGSFSV--EVI-LTLFAFKLLYPNHFHLNRGNHETD 132 (316)
T ss_pred ceeEEeecccCCHHHHHHHHHhcCCCCccCeEEEEeeEecCCCChH--HHH-HHHHHhhhccCCceEEEeeccchH
Confidence 478999999965432 2344433222 2357999999998765422 222 11112211 13478899999973
No 132
>smart00060 FN3 Fibronectin type 3 domain. One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins.
Probab=92.38 E-value=1 Score=32.54 Aligned_cols=69 Identities=13% Similarity=0.232 Sum_probs=39.0
Q ss_pred eEEEEecCCCcEEEEEEeCCCCC--ccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEEEEeCc
Q 012895 56 QVHISLAAKDYIRVSWITDDKEA--ESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYYYRCGG 132 (454)
Q Consensus 56 ~v~l~~~~~~~~~v~W~t~~~~~--~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Yrv~~ 132 (454)
.+++.....+++.|.|....... .-.++|........ ....... .....+...|.+|+|++.|.++|..
T Consensus 6 ~~~~~~~~~~~~~v~W~~~~~~~~~~y~~~~~~~~~~~~----~~~~~~~----~~~~~~~~~i~~L~~~~~Y~v~v~a 76 (83)
T smart00060 6 NLRVTDVTSTSVTLSWEPPPDDGITGYIVGYRVEYREEG----SSWKEVN----VTPSSTSYTLTGLKPGTEYEFRVRA 76 (83)
T ss_pred cEEEEEEeCCEEEEEECCCCCCCCCccEEEEEEEEecCC----CccEEEE----ecCCccEEEEeCcCCCCEEEEEEEE
Confidence 35566555569999998553221 23455554432111 0000000 1111567889999999999999853
No 133
>cd07419 MPP_Bsu1_C Arabidopsis thaliana Bsu1 phosphatase and related proteins, C-terminal metallophosphatase domain. Bsu1 encodes a nuclear serine-threonine protein phosphatase found in plants and protozoans. Bsu1 has a C-terminal phosphatase domain and an N-terminal Kelch-repeat domain. Bsu1 is preferentially expressed in elongating plant cells. It modulates the phosphorylation state of Bes1, a transcriptional regulator phosphorylated by the glycogen synthase kinase Bin2, as part of a steroid hormone signal transduction pathway. The PPP (phosphoprotein phosphatase) family, to which Bsu1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most
Probab=91.78 E-value=0.32 Score=47.51 Aligned_cols=68 Identities=21% Similarity=0.150 Sum_probs=39.2
Q ss_pred EEEEEecCCCCCCh-HHHHHHhhcC----CC----CeEeecCccccCCCChhhHHHHhhhhhhhhcC--CCeeecCCCcc
Q 012895 149 EFAIVGDLGQTEWT-NSTLDHVGSK----DY----DVFLLPGDLSYADFQQPLWDSFGRLVEPYASS--RPWMVTEGNHE 217 (454)
Q Consensus 149 ~f~~igD~~~~~~~-~~~l~~i~~~----~p----d~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~~--~P~~~v~GNHD 217 (454)
.+.++||+|..... .++++.+... .. .-+|++||+++.+.... + ....+..+... .-++.+.||||
T Consensus 49 ~~~viGDIHG~~~~L~~ll~~~g~~~~~~~~~~~~~~~vfLGDyVDRGp~s~--e-vl~ll~~lk~~~p~~v~lLRGNHE 125 (311)
T cd07419 49 PIKIFGDIHGQFGDLMRLFDEYGSPVTEAAGDIEYIDYLFLGDYVDRGSNSL--E-TICLLLALKVKYPNQIHLIRGNHE 125 (311)
T ss_pred CEEEEEeccCCHHHHHHHHHHcCCCcccccCCCcCceEEEECCccCCCCChH--H-HHHHHHHhhhcCCCcEEEeccccc
Confidence 37889999965432 3355444211 11 23789999998665422 1 12222223222 35788999999
Q ss_pred cC
Q 012895 218 IE 219 (454)
Q Consensus 218 ~~ 219 (454)
..
T Consensus 126 ~~ 127 (311)
T cd07419 126 DR 127 (311)
T ss_pred hH
Confidence 74
No 134
>cd00063 FN3 Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases.
Probab=89.21 E-value=3 Score=31.00 Aligned_cols=68 Identities=18% Similarity=0.320 Sum_probs=38.0
Q ss_pred eeEEEEecCCCcEEEEEEeCCCC----CccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEEEEe
Q 012895 55 QQVHISLAAKDYIRVSWITDDKE----AESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYYYRC 130 (454)
Q Consensus 55 ~~v~l~~~~~~~~~v~W~t~~~~----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Yrv 130 (454)
..+.+.....+++.|.|...... ..-.|.|.......... .. ....-..++.|.+|.|++.|.++|
T Consensus 5 ~~~~~~~~~~~~~~v~W~~~~~~~~~~~~y~v~~~~~~~~~~~~-------~~---~~~~~~~~~~i~~l~p~~~Y~~~v 74 (93)
T cd00063 5 TNLRVTDVTSTSVTLSWTPPEDDGGPITGYVVEYREKGSGDWKE-------VE---VTPGSETSYTLTGLKPGTEYEFRV 74 (93)
T ss_pred CCcEEEEecCCEEEEEECCCCCCCCcceeEEEEEeeCCCCCCEE-------ee---ccCCcccEEEEccccCCCEEEEEE
Confidence 33444444578999999887432 12233443332111111 00 011245667889999999999998
Q ss_pred Cc
Q 012895 131 GG 132 (454)
Q Consensus 131 ~~ 132 (454)
..
T Consensus 75 ~a 76 (93)
T cd00063 75 RA 76 (93)
T ss_pred EE
Confidence 53
No 135
>KOG4221 consensus Receptor mediating netrin-dependent axon guidance [Signal transduction mechanisms]
Probab=87.34 E-value=0.89 Score=50.88 Aligned_cols=80 Identities=26% Similarity=0.449 Sum_probs=49.5
Q ss_pred CCCCCeeEEEEecCCCcEEEEEEeCCCCCc-c-----EEEEeecCCCCc---eEEEeEeEEEeeeeeecCeEEEEEECCC
Q 012895 50 SESDPQQVHISLAAKDYIRVSWITDDKEAE-S-----VVEYGKLPGRYN---TVATGEHTSYQFFFYKSGKIHHVKIGPL 120 (454)
Q Consensus 50 ~~~~p~~v~l~~~~~~~~~v~W~t~~~~~~-~-----~v~y~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~l~gL 120 (454)
+...|+-|.+....+++++|.|..+..... . .++|++.+.... ..+.+. ...-.+++|
T Consensus 615 PsaPP~Nl~lev~sStsVrVsW~pP~~~t~ng~itgYkIRy~~~~~~~~~~~t~v~~n-------------~~~~l~~~L 681 (1381)
T KOG4221|consen 615 PSAPPQNLSLEVVSSTSVRVSWLPPPSETQNGQITGYKIRYRKLSREDEVNETVVKGN-------------TTQYLFNGL 681 (1381)
T ss_pred CCCCCcceEEEecCCCeEEEEccCCCcccccceEEEEEEEecccCcccccceeecccc-------------hhhhHhhcC
Confidence 455566699999999999999999864322 1 233443322111 111111 112246789
Q ss_pred CCCCEEEEEeCc--------cCceeEEECC
Q 012895 121 EPATTYYYRCGG--------RGPEFSFKMP 142 (454)
Q Consensus 121 ~p~t~Y~Yrv~~--------~s~~~~F~T~ 142 (454)
+|+|.|.+||.. .+++.+|.|+
T Consensus 682 ep~T~Y~vrIsa~t~nGtGpaS~w~~aeT~ 711 (1381)
T KOG4221|consen 682 EPNTQYRVRISAMTVNGTGPASEWVSAETP 711 (1381)
T ss_pred CCCceEEEEEEEeccCCCCCcccceeccCc
Confidence 999999999953 3567778775
No 136
>KOG3513 consensus Neural cell adhesion molecule L1 [Signal transduction mechanisms]
Probab=83.50 E-value=3.6 Score=46.00 Aligned_cols=75 Identities=19% Similarity=0.269 Sum_probs=51.2
Q ss_pred CCCCCCeeEEEEecCCCcEEEEEEeCC----CCCccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCC
Q 012895 49 RSESDPQQVHISLAAKDYIRVSWITDD----KEAESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPAT 124 (454)
Q Consensus 49 ~~~~~p~~v~l~~~~~~~~~v~W~t~~----~~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t 124 (454)
.+..+|+.+++...+.+++.|.|...- ....-.|+|+...+... ...... ..+-.-...|+||+|+|
T Consensus 818 ~P~~ap~~~~~~~~s~s~~~v~W~~~~~~nG~l~gY~v~Y~~~~~~~~-----~~~~~~----i~~~~~~~~ltgL~~~T 888 (1051)
T KOG3513|consen 818 EPPVAPTKLSAKPLSSSEVNLSWKPPLWDNGKLTGYEVKYWKINEKEG-----SLSRVQ----IAGNRTSWRLTGLEPNT 888 (1051)
T ss_pred CCCCCCccceeecccCceEEEEecCcCccCCccceeEEEEEEcCCCcc-----ccccee----ecCCcceEeeeCCCCCc
Confidence 446788888888888999999995442 23456888998765431 110111 12344557899999999
Q ss_pred EEEEEeCc
Q 012895 125 TYYYRCGG 132 (454)
Q Consensus 125 ~Y~Yrv~~ 132 (454)
.|++.|..
T Consensus 889 ~Y~~~vrA 896 (1051)
T KOG3513|consen 889 KYRFYVRA 896 (1051)
T ss_pred eEEEEEEE
Confidence 99999863
No 137
>KOG0371 consensus Serine/threonine protein phosphatase 2A, catalytic subunit [Signal transduction mechanisms]
Probab=75.60 E-value=3.9 Score=38.12 Aligned_cols=65 Identities=18% Similarity=0.251 Sum_probs=39.0
Q ss_pred EEEEecCCCCCChHHHHHH--hhcCCCCe-EeecCccccCCCChhhHHHHhhhhhhhhcC--CCeeecCCCcccC
Q 012895 150 FAIVGDLGQTEWTNSTLDH--VGSKDYDV-FLLPGDLSYADFQQPLWDSFGRLVEPYASS--RPWMVTEGNHEIE 219 (454)
Q Consensus 150 f~~igD~~~~~~~~~~l~~--i~~~~pd~-vl~~GDl~y~~~~~~~~~~~~~~~~~l~~~--~P~~~v~GNHD~~ 219 (454)
..+.||.|.... ..++. |....||. .++.||.++.+....+- ...+-.+.-+ -.+-.+.||||..
T Consensus 62 vtvcGDvHGqf~--dl~ELfkiGG~~pdtnylfmGDyvdrGy~Svet---VS~lva~Kvry~~rvtilrGNHEsr 131 (319)
T KOG0371|consen 62 VTVCGDVHGQFH--DLIELFKIGGLAPDTNYLFMGDYVDRGYYSVET---VSLLVALKVRYPDRVTILRGNHESR 131 (319)
T ss_pred eEEecCcchhHH--HHHHHHHccCCCCCcceeeeeeecccccchHHH---HHHHHHhhccccceeEEecCchHHH
Confidence 567999997643 34444 44566775 78899999866543221 1112112211 3466799999984
No 138
>KOG0373 consensus Serine/threonine specific protein phosphatase involved in cell cycle control, PP2A-related [Cell cycle control, cell division, chromosome partitioning; Signal transduction mechanisms]
Probab=75.46 E-value=5 Score=36.45 Aligned_cols=65 Identities=18% Similarity=0.285 Sum_probs=39.4
Q ss_pred EEEEecCCCCCChHHHHHHhh--cCCCCe-EeecCccccCCCChhhHHHHhhhhhhhhcCC--CeeecCCCcccC
Q 012895 150 FAIVGDLGQTEWTNSTLDHVG--SKDYDV-FLLPGDLSYADFQQPLWDSFGRLVEPYASSR--PWMVTEGNHEIE 219 (454)
Q Consensus 150 f~~igD~~~~~~~~~~l~~i~--~~~pd~-vl~~GDl~y~~~~~~~~~~~~~~~~~l~~~~--P~~~v~GNHD~~ 219 (454)
+.+.||+|... ..+++..+ -.-||. -|+.||+++.+.+. .+.|.-+ --+..+. .+-.+.||||..
T Consensus 48 VTvCGDIHGQF--yDL~eLFrtgG~vP~tnYiFmGDfVDRGyyS--LEtfT~l-~~LkaryP~~ITLlRGNHEsR 117 (306)
T KOG0373|consen 48 VTVCGDIHGQF--YDLLELFRTGGQVPDTNYIFMGDFVDRGYYS--LETFTLL-LLLKARYPAKITLLRGNHESR 117 (306)
T ss_pred eeEeeccchhH--HHHHHHHHhcCCCCCcceEEecccccccccc--HHHHHHH-HHHhhcCCceeEEeeccchhh
Confidence 45789998653 33444443 344554 68899999876542 2343322 2233333 366789999985
No 139
>KOG0372 consensus Serine/threonine specific protein phosphatase involved in glycogen accumulation, PP2A-related [Carbohydrate transport and metabolism; Signal transduction mechanisms]
Probab=75.39 E-value=5.2 Score=37.07 Aligned_cols=66 Identities=18% Similarity=0.255 Sum_probs=38.6
Q ss_pred EEEEecCCCCCChHHHHHHhh---cCCCCeEeecCccccCCCChhhHHHHhhhhhhhhcC--CCeeecCCCcccCC
Q 012895 150 FAIVGDLGQTEWTNSTLDHVG---SKDYDVFLLPGDLSYADFQQPLWDSFGRLVEPYASS--RPWMVTEGNHEIES 220 (454)
Q Consensus 150 f~~igD~~~~~~~~~~l~~i~---~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~~--~P~~~v~GNHD~~~ 220 (454)
+.+.||+|.... .+++..+ ...-.=-|++||+++.+-+. -+.+.-+ -.++.. -.+..+.||||...
T Consensus 45 vtvcGDIHGQf~--Dllelf~igG~~~~t~YLFLGDyVDRG~~S--vEt~lLL-l~lK~rYP~ritLiRGNHEsRq 115 (303)
T KOG0372|consen 45 VTVCGDIHGQFY--DLLELFRIGGDVPETNYLFLGDYVDRGYYS--VETFLLL-LALKVRYPDRITLIRGNHESRQ 115 (303)
T ss_pred cEEeecccchHH--HHHHHHHhCCCCCCCceEeecchhccccch--HHHHHHH-HHHhhcCcceeEEeeccchhhh
Confidence 468999997643 3444433 22223478999999866542 2333221 122222 34778999999853
No 140
>KOG0374 consensus Serine/threonine specific protein phosphatase PP1, catalytic subunit [Signal transduction mechanisms; General function prediction only]
Probab=72.28 E-value=4.1 Score=40.06 Aligned_cols=71 Identities=25% Similarity=0.259 Sum_probs=41.0
Q ss_pred EEEEEecCCCCCCh-HHHHHHhhcCCCC-eEeecCccccCCCChhhHHHHhhhhhhhhc--CCCeeecCCCcccCCCC
Q 012895 149 EFAIVGDLGQTEWT-NSTLDHVGSKDYD-VFLLPGDLSYADFQQPLWDSFGRLVEPYAS--SRPWMVTEGNHEIESIP 222 (454)
Q Consensus 149 ~f~~igD~~~~~~~-~~~l~~i~~~~pd-~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~--~~P~~~v~GNHD~~~~~ 222 (454)
-+.++||+|.+... .++++......|+ -.+++||+++.+...- +.+. ++-.+.. .--++...||||.....
T Consensus 60 PV~i~GDiHGq~~DLlrlf~~~g~~pp~~~ylFLGDYVDRG~~sl--E~i~-LL~a~Ki~yp~~~~lLRGNHE~~~in 134 (331)
T KOG0374|consen 60 PVKIVGDIHGQFGDLLRLFDLLGSFPPDQNYVFLGDYVDRGKQSL--ETIC-LLFALKIKYPENVFLLRGNHECASIN 134 (331)
T ss_pred CEEEEccCcCCHHHHHHHHHhcCCCCCcccEEEecccccCCccce--EEee-hhhhhhhhCCceEEEecccccccccc
Confidence 47889999976542 2233333312354 4799999998765421 1110 1111111 24589999999997543
No 141
>PTZ00235 DNA polymerase epsilon subunit B; Provisional
Probab=70.99 E-value=24 Score=33.86 Aligned_cols=76 Identities=11% Similarity=0.048 Sum_probs=45.9
Q ss_pred CCCCeEEEEEecCCCCCCh-----HHHHHHhh-----cCCCCeEeecCccccCC-----CChhhH----HHHhh-hh---
Q 012895 144 ANFPIEFAIVGDLGQTEWT-----NSTLDHVG-----SKDYDVFLLPGDLSYAD-----FQQPLW----DSFGR-LV--- 200 (454)
Q Consensus 144 ~~~~~~f~~igD~~~~~~~-----~~~l~~i~-----~~~pd~vl~~GDl~y~~-----~~~~~~----~~~~~-~~--- 200 (454)
.+...+|+++||.+.+... +.+++.+. ...|-.+|+.|+++... .....+ +.+.. .+
T Consensus 24 ~~~~~~~VilSDV~LD~p~tl~~L~kvf~~y~~~~~~~~~P~~fVL~GnF~S~p~~~~~~~~~~yk~~Fd~La~llls~f 103 (291)
T PTZ00235 24 NDKRHNWIIMHDVYLDSPYTFEVLDKMLSLYVNTYPENELPVGFIFMGDFISLKFDYNRNFHKVYIKGFEKLSVMLISKF 103 (291)
T ss_pred CCCceEEEEEEeeccCCHHHHHHHHHHHHHhhccCcccCCCeEEEEecCccCCcccCCCCchHHHHHHHHHHHHHHHHhC
Confidence 3567899999999986432 22333332 13488999999997542 111122 22222 11
Q ss_pred hhhhcCCCeeecCCCcccC
Q 012895 201 EPYASSRPWMVTEGNHEIE 219 (454)
Q Consensus 201 ~~l~~~~P~~~v~GNHD~~ 219 (454)
..+....-+++|||-.|-.
T Consensus 104 p~L~~~s~fVFVPGpnDPw 122 (291)
T PTZ00235 104 KLILEHCYLIFIPGINDPC 122 (291)
T ss_pred hHHHhcCeEEEECCCCCCC
Confidence 1234457799999999974
No 142
>KOG4221 consensus Receptor mediating netrin-dependent axon guidance [Signal transduction mechanisms]
Probab=70.74 E-value=19 Score=40.98 Aligned_cols=66 Identities=15% Similarity=0.160 Sum_probs=40.1
Q ss_pred CCcEEEEEEeCCCCCccE----EEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEEEEeCc-------
Q 012895 64 KDYIRVSWITDDKEAESV----VEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYYYRCGG------- 132 (454)
Q Consensus 64 ~~~~~v~W~t~~~~~~~~----v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Yrv~~------- 132 (454)
..++.|.|..+.-+...+ +.|........... ..-.++.+|.||+|.|.|.|||..
T Consensus 534 ~~ti~v~WepP~~~n~~I~~yk~~ys~~~~~~~~~~-------------~~n~~e~ti~gL~k~TeY~~~vvA~N~~G~g 600 (1381)
T KOG4221|consen 534 PTTILVTWEPPPFGNGPITGYKLFYSEDDTGKELRV-------------ENNATEYTINGLEKYTEYSIRVVAYNSAGSG 600 (1381)
T ss_pred cceEEEEecCCCCCCCCceEEEEEEEcCCCCceEEE-------------ecCccEEEeecCCCccceEEEEEEecCCCCC
Confidence 778889999885333332 33333311111111 123456678899999999999963
Q ss_pred -cCceeEEECC
Q 012895 133 -RGPEFSFKMP 142 (454)
Q Consensus 133 -~s~~~~F~T~ 142 (454)
.+....|+|.
T Consensus 601 ~sS~~i~V~Tl 611 (1381)
T KOG4221|consen 601 VSSADITVRTL 611 (1381)
T ss_pred CCCCceEEEec
Confidence 3566778774
No 143
>KOG2476 consensus Uncharacterized conserved protein [Function unknown]
Probab=66.85 E-value=11 Score=38.12 Aligned_cols=66 Identities=14% Similarity=0.204 Sum_probs=45.0
Q ss_pred CeEEEEEecCCCCCChHHHHHHhh-----cCCCCeEeecCccccCCCChhhHHHHhhhhhhhhcCCCeeecCCCc
Q 012895 147 PIEFAIVGDLGQTEWTNSTLDHVG-----SKDYDVFLLPGDLSYADFQQPLWDSFGRLVEPYASSRPWMVTEGNH 216 (454)
Q Consensus 147 ~~~f~~igD~~~~~~~~~~l~~i~-----~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNH 216 (454)
+.|++++||.. +....+++.|. ....|+++.+|++...+....+|..+.+-...+. +|+|+.-+|-
T Consensus 5 ~~kILv~Gd~~--Gr~~eli~rI~~v~Kk~GpFd~liCvGnfF~~~~~~~e~~~ykng~~~vP--iptY~~g~~~ 75 (528)
T KOG2476|consen 5 DAKILVCGDVE--GRFDELIKRIQKVNKKSGPFDLLICVGNFFGHDTQNAEVEKYKNGTKKVP--IPTYFLGDNA 75 (528)
T ss_pred CceEEEEcCcc--ccHHHHHHHHHHHhhcCCCceEEEEecccCCCccchhHHHHHhcCCccCc--eeEEEecCCC
Confidence 46999999974 34455666553 3458999999999976665666666654433332 7888776665
No 144
>cd07390 MPP_AQ1575 Aquifex aeolicus AQ1575 and related proteins, metallophosphatase domain. This family includes bacterial and archeal proteins homologous to AQ1575, an uncharacterized Aquifex aeolicus protein. AQ1575 may play an accessory role in DNA repair, based on the close proximity of its gene to Holliday junction resolvasome genes. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a d
Probab=61.56 E-value=7.7 Score=34.03 Aligned_cols=33 Identities=24% Similarity=0.182 Sum_probs=22.5
Q ss_pred eEEEEEccccccCCCCCCCCcHHHHHHHHHHHHhcCCcEEEecccccceee
Q 012895 293 WIFVLLHAPWYNTNTAHQGEGESMRNSMEELLYNARVDVVFAGHVHAYERF 343 (454)
Q Consensus 293 w~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~y~r~ 343 (454)
..|+++|.|...... +.+.+++++||+|.....
T Consensus 108 ~~i~l~H~~~~~~~~------------------~~~~d~vi~GHtH~~~~~ 140 (168)
T cd07390 108 RRVYLSHYPILEWNG------------------LDRGSWNLHGHIHSNSPD 140 (168)
T ss_pred EEEEEEeCCcccCCC------------------CCCCeEEEEeeeCCCCCC
Confidence 379999976432100 345789999999986554
No 145
>PF10179 DUF2369: Uncharacterised conserved protein (DUF2369); InterPro: IPR019326 This is a proline-rich region of a group of proteins found from plants to fungi. The function is largely unknown, although the entry contains Fibronectin type-III domain-containing protein C4orf31, which promotes matrix assembly and cell adhesiveness.
Probab=56.82 E-value=27 Score=33.76 Aligned_cols=18 Identities=33% Similarity=0.632 Sum_probs=15.2
Q ss_pred EEEECCCCCCCEEEEEeC
Q 012895 114 HVKIGPLEPATTYYYRCG 131 (454)
Q Consensus 114 ~~~l~gL~p~t~Y~Yrv~ 131 (454)
..+|.+|.|||+||+.|-
T Consensus 16 ~~t~~~L~p~t~YyfdVF 33 (300)
T PF10179_consen 16 NQTLSGLKPDTTYYFDVF 33 (300)
T ss_pred eEEeccCCCCCeEEEEEE
Confidence 456789999999999984
No 146
>COG2248 Predicted hydrolase (metallo-beta-lactamase superfamily) [General function prediction only]
Probab=56.11 E-value=24 Score=33.06 Aligned_cols=73 Identities=14% Similarity=0.097 Sum_probs=49.5
Q ss_pred CCCeEEEEEecCCCCCChHHHHHHhhcCCCCeEeecCccccCCCCh---hhHHHHhhhhhhhhcCCCeeecCCCccc
Q 012895 145 NFPIEFAIVGDLGQTEWTNSTLDHVGSKDYDVFLLPGDLSYADFQQ---PLWDSFGRLVEPYASSRPWMVTEGNHEI 218 (454)
Q Consensus 145 ~~~~~f~~igD~~~~~~~~~~l~~i~~~~pd~vl~~GDl~y~~~~~---~~~~~~~~~~~~l~~~~P~~~v~GNHD~ 218 (454)
++..+|++.+|.+. ......++.+...+|+++|+.|=.+|-.+.. ...+.-.+.++.+....+--.+..-|=.
T Consensus 174 dg~~~i~faSDvqG-p~~~~~l~~i~e~~P~v~ii~GPpty~lg~r~~~~~~E~~irNl~~ii~~~~~~lViDHHll 249 (304)
T COG2248 174 DGKSSIVFASDVQG-PINDEALEFILEKRPDVLIIGGPPTYLLGYRVGPKSLEKGIRNLERIIEETNATLVIDHHLL 249 (304)
T ss_pred cCCeEEEEcccccC-CCccHHHHHHHhcCCCEEEecCCchhHhhhhcChHHHHHHHHHHHHHHHhCcceEEEeehhh
Confidence 56789999999964 3456788999899999999999999644431 1222333455555555555556666655
No 147
>PF06874 FBPase_2: Firmicute fructose-1,6-bisphosphatase; InterPro: IPR009164 Fructose 1,6-bisphosphatase catalyses the hydrolysis of fructose 1,6-bisphosphate to fructose 6-phosphate []. This is an essential reaction in the process of gluconeogenesis, the process by which non-carbohydrate precursors are converted to glucose, and hence this enzyme is found almost universally. Enzyme activity can be regulated by a number of different mechanisms including AMP inhibition, cylic AMP-dependent phosphorylation and light-dependent-activation. This entry represents a group of fructose 1,6-bisphosphatases found within the Firmicutes (low GC Gram-positive bacteria) which do not show any significant sequence similarity to the enzymes from other organisms. The Bacillus subtilis enzyme is inhibited by AMP, though this can be overcome by phosphoenolpyruvate, and is dependent on Mn(2+) [, ]. Mutants lacking this enzyme are apparently still able to grow on gluconeogenic growth substrates such as malate and glycerol.; GO: 0042132 fructose 1,6-bisphosphate 1-phosphatase activity, 0006094 gluconeogenesis
Probab=55.60 E-value=8.9 Score=40.50 Aligned_cols=45 Identities=16% Similarity=0.221 Sum_probs=32.1
Q ss_pred hhcCCCCeEeecCccccCCCChhhHHHHhhhhhhhhcCCCeeecCCCcccC
Q 012895 169 VGSKDYDVFLLPGDLSYADFQQPLWDSFGRLVEPYASSRPWMVTEGNHEIE 219 (454)
Q Consensus 169 i~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~ 219 (454)
|++.-+|-+=++||+.+.+.... ..++.|....-+=..|||||+.
T Consensus 180 IqrL~VDhLHIvGDIyDRGp~pd------~ImD~Lm~~hsvDIQWGNHDIl 224 (640)
T PF06874_consen 180 IQRLAVDHLHIVGDIYDRGPRPD------KIMDRLMNYHSVDIQWGNHDIL 224 (640)
T ss_pred HHHHhhhheeecccccCCCCChh------HHHHHHhcCCCccccccchHHH
Confidence 34678899999999988665432 3455555545566789999995
No 148
>COG2843 PgsA Putative enzyme of poly-gamma-glutamate biosynthesis (capsule formation) [Cell envelope biogenesis, outer membrane]
Probab=53.27 E-value=34 Score=34.18 Aligned_cols=62 Identities=16% Similarity=0.230 Sum_probs=41.7
Q ss_pred HHHHHHHHHhhccCCCCeEEEEEcccc-ccCCCCCCCCcHHHHHHHHHHHHhcCCcEEEecccccceeee
Q 012895 276 YKWLKADLAKINRKKTPWIFVLLHAPW-YNTNTAHQGEGESMRNSMEELLYNARVDVVFAGHVHAYERFT 344 (454)
Q Consensus 276 ~~WL~~~L~~~~~~~~~w~Iv~~H~P~-~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~y~r~~ 344 (454)
..-...++...++ +.+-+|++.|+-. |.. +....+.+|..-+...++++++.+|-|..|-.+
T Consensus 210 ~~~~~~~v~~a~k-~adlviv~~HwG~ey~~------~p~~~q~~~a~~lidAGa~iIvGhhpHvlqpiE 272 (372)
T COG2843 210 LERVLAAVLAAKK-GADLVIVQPHWGVEYAY------EPAAGQRALARRLIDAGADIIVGHHPHVLQPIE 272 (372)
T ss_pred hhhhHHHHHhhhc-cCCEEEEeccccccccC------CCcHHHHHHHHHHHhcCcCeEecCCCCcCcceE
Confidence 3345555555555 5677899999742 222 112345677777777999999999999977665
No 149
>KOG0375 consensus Serine-threonine phosphatase 2B, catalytic subunit [General function prediction only]
Probab=48.37 E-value=20 Score=35.09 Aligned_cols=68 Identities=13% Similarity=0.192 Sum_probs=37.0
Q ss_pred EEEEEecCCCCCChHHHHHHhh-cCCC--CeEeecCccccCCCChhhHHHHhhhhhhhhcCCCeeecCCCcccC
Q 012895 149 EFAIVGDLGQTEWTNSTLDHVG-SKDY--DVFLLPGDLSYADFQQPLWDSFGRLVEPYASSRPWMVTEGNHEIE 219 (454)
Q Consensus 149 ~f~~igD~~~~~~~~~~l~~i~-~~~p--d~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~ 219 (454)
-+.+.||+|.+.. .+++..+ -..| ---|++||.++.+...-+--.+.-.++ +.-...++...||||..
T Consensus 89 PiTVCGDIHGQf~--DLmKLFEVGG~PA~t~YLFLGDYVDRGyFSiECvlYLwsLK-i~yp~tl~lLRGNHECr 159 (517)
T KOG0375|consen 89 PITVCGDIHGQFF--DLMKLFEVGGSPANTRYLFLGDYVDRGYFSIECVLYLWSLK-INYPKTLFLLRGNHECR 159 (517)
T ss_pred CeeEecccchHHH--HHHHHHHccCCcccceeEeeccccccceeeeehHHHHHHHh-cCCCCeEEEecCCcchh
Confidence 3678999997532 3444333 2223 347899999986643211001111111 11124577899999985
No 150
>PRK10301 hypothetical protein; Provisional
Probab=46.80 E-value=1.7e+02 Score=24.29 Aligned_cols=13 Identities=15% Similarity=0.491 Sum_probs=10.7
Q ss_pred CCCCeeEEEEecC
Q 012895 51 ESDPQQVHISLAA 63 (454)
Q Consensus 51 ~~~p~~v~l~~~~ 63 (454)
...|.+|.|.+.+
T Consensus 42 ~~~P~~V~L~F~e 54 (124)
T PRK10301 42 TAAPQALTLNFSE 54 (124)
T ss_pred ccCCCEEEEEcCC
Confidence 4579999999987
No 151
>PF01108 Tissue_fac: Tissue factor; PDB: 3OG4_B 3OG6_B 1FYH_E 1FG9_D 1JRH_I 3DGC_R 3DLQ_R 1LQS_R 1Y6M_R 1J7V_R ....
Probab=46.67 E-value=1.2e+02 Score=24.20 Aligned_cols=71 Identities=15% Similarity=0.191 Sum_probs=41.5
Q ss_pred CCCeeEEEEecCCCcEEEEEEeCCC-C--CccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCC--CCCEE
Q 012895 52 SDPQQVHISLAAKDYIRVSWITDDK-E--AESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLE--PATTY 126 (454)
Q Consensus 52 ~~p~~v~l~~~~~~~~~v~W~t~~~-~--~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~--p~t~Y 126 (454)
..|+.|.+...+. ..++.|.-... + ..-.|+|.......+..+. ..... ...++.|+... +...|
T Consensus 23 p~P~nv~~~s~nf-~~iL~W~~~~~~~~~~~ytVq~~~~~~~~W~~v~-~C~~i--------~~~~Cdlt~~~~~~~~~Y 92 (107)
T PF01108_consen 23 PAPQNVTVDSVNF-KHILRWDPGPGSPPNVTYTVQYKKYGSSSWKDVP-GCQNI--------TETSCDLTDETSDPSESY 92 (107)
T ss_dssp SSCEEEEEEEETT-EEEEEEEESTTSSSTEEEEEEEEESSTSCEEEEC-CEEEE--------SSSEEECTTCCTTTTSEE
T ss_pred CCCCeeEEEEECC-ceEEEeCCCCCCCCCeEEEEEEEecCCcceeecc-ceecc--------cccceeCcchhhcCcCCE
Confidence 3567777777654 36789999432 2 2357888743333333332 22111 12567787754 68889
Q ss_pred EEEeCc
Q 012895 127 YYRCGG 132 (454)
Q Consensus 127 ~Yrv~~ 132 (454)
+.||..
T Consensus 93 ~~rV~A 98 (107)
T PF01108_consen 93 YARVRA 98 (107)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 999864
No 152
>COG3855 Fbp Uncharacterized protein conserved in bacteria [Carbohydrate transport and metabolism]
Probab=43.06 E-value=19 Score=36.54 Aligned_cols=45 Identities=16% Similarity=0.138 Sum_probs=30.8
Q ss_pred hcCCCCeEeecCccccCCCChhhHHHHhhhhhhhhcCCCeeecCCCcccCC
Q 012895 170 GSKDYDVFLLPGDLSYADFQQPLWDSFGRLVEPYASSRPWMVTEGNHEIES 220 (454)
Q Consensus 170 ~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~ 220 (454)
++..+|-+=++||+.+.+.... ..++.|....-+=..|||||+..
T Consensus 187 qrLvVDhLHiVGDIyDRGP~pd------~Imd~L~~yhsvDiQWGNHDilW 231 (648)
T COG3855 187 QRLVVDHLHIVGDIYDRGPYPD------KIMDTLINYHSVDIQWGNHDILW 231 (648)
T ss_pred HHHhhhheeeecccccCCCCch------HHHHHHhhcccccccccCcceEE
Confidence 4667888999999987665432 34444544444567899999953
No 153
>PF07353 Uroplakin_II: Uroplakin II; InterPro: IPR009952 This family contains uroplakin II, which is approximately 180 residues long and seems to be restricted to mammals. Uroplakin II is an integral membrane protein, and is one of the components of the apical plaques of mammalian urothelium formed by the asymmetric unit membrane - this is believed to play a role in strengthening the urothelial apical surface to prevent the cells from rupturing during bladder distension [].; GO: 0016044 cellular membrane organization, 0030176 integral to endoplasmic reticulum membrane
Probab=42.58 E-value=2.2e+02 Score=24.72 Aligned_cols=14 Identities=36% Similarity=0.802 Sum_probs=11.7
Q ss_pred EECCCCCCCEEEEE
Q 012895 116 KIGPLEPATTYYYR 129 (454)
Q Consensus 116 ~l~gL~p~t~Y~Yr 129 (454)
.+++|.|||+|+.+
T Consensus 105 qVtNL~pGTkY~is 118 (184)
T PF07353_consen 105 QVTNLQPGTKYYIS 118 (184)
T ss_pred EeeccCCCcEEEEE
Confidence 57899999999754
No 154
>KOG3513 consensus Neural cell adhesion molecule L1 [Signal transduction mechanisms]
Probab=37.96 E-value=99 Score=35.16 Aligned_cols=73 Identities=18% Similarity=0.237 Sum_probs=46.1
Q ss_pred CCeeEEEEecCCCcEEEEEEeCCCCCccEEEEeecC----CCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEEE
Q 012895 53 DPQQVHISLAAKDYIRVSWITDDKEAESVVEYGKLP----GRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYYY 128 (454)
Q Consensus 53 ~p~~v~l~~~~~~~~~v~W~t~~~~~~~~v~y~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y 128 (454)
.|.+|++.--..+.++++|.-....-.++..|.... ...+..+. +. . ....+. +.+++-+|.|-..|.|
T Consensus 617 pP~~v~~~~i~~t~~~lsW~~g~dn~SpI~~Y~iq~rt~~~~~W~~v~-~v---p--~~~~~~-~sa~vv~L~Pwv~YeF 689 (1051)
T KOG3513|consen 617 PPPDVHVDDISDTTARLSWSPGSDNNSPIEKYTIQFRTPFPGKWKAVT-TV---P--GNITGD-ESATVVNLSPWVEYEF 689 (1051)
T ss_pred CCCceeEeeeccceEEEEeecCCCCCCCceEEeEEecCCCCCcceEee-EC---C--CcccCc-cceeEEccCCCcceEE
Confidence 455777766668999999998865434455555432 12233332 21 1 113334 5688899999999999
Q ss_pred EeCc
Q 012895 129 RCGG 132 (454)
Q Consensus 129 rv~~ 132 (454)
||..
T Consensus 690 RV~A 693 (1051)
T KOG3513|consen 690 RVVA 693 (1051)
T ss_pred EEEE
Confidence 9863
No 155
>PF01784 NIF3: NIF3 (NGG1p interacting factor 3); InterPro: IPR002678 This family contains several NIF3 (NGG1p interacting factor 3) protein homologues. NIF3 interacts with the yeast transcriptional coactivator NGG1p which is part of the ADA complex, the exact function of this interaction is unknown [][].; PDB: 1NMO_F 1NMP_B 2GX8_C 2FYW_B 2NYD_A 3LNL_A 2YYB_A 3RXY_F.
Probab=36.90 E-value=42 Score=31.37 Aligned_cols=44 Identities=16% Similarity=0.362 Sum_probs=22.7
Q ss_pred EEEEEccccccCCCCCCCCcHHHHHHHHHHHHhcCCcEEEeccccc
Q 012895 294 IFVLLHAPWYNTNTAHQGEGESMRNSMEELLYNARVDVVFAGHVHA 339 (454)
Q Consensus 294 ~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~ 339 (454)
-++++|||++-...... ............+.++++ .+++-|+..
T Consensus 55 dlIItHHP~~f~~~~~~-~~~~~~~~~~~~li~~~I-~vy~~Ht~l 98 (241)
T PF01784_consen 55 DLIITHHPLFFKPLKSL-TGDDYKGKIIEKLIKNGI-SVYSAHTNL 98 (241)
T ss_dssp SEEEESS-SSSSTSSHC-HCHSHHHHHHHHHHHTT--EEEEESHHH
T ss_pred CEEEEcCchhhcCCccc-cccchhhHHHHHHHHCCC-EEEEecccc
Confidence 38899999854322111 111123334444455777 678888875
No 156
>KOG4258 consensus Insulin/growth factor receptor (contains protein kinase domain) [Signal transduction mechanisms]
Probab=34.52 E-value=1.5e+02 Score=32.96 Aligned_cols=104 Identities=15% Similarity=0.204 Sum_probs=60.1
Q ss_pred CCCCeeEEEEec--CCCcEEEEEEeCCCCC-----ccEEEEeecCCCCceEE------EeEeEEEeee------eeecCe
Q 012895 51 ESDPQQVHISLA--AKDYIRVSWITDDKEA-----ESVVEYGKLPGRYNTVA------TGEHTSYQFF------FYKSGK 111 (454)
Q Consensus 51 ~~~p~~v~l~~~--~~~~~~v~W~t~~~~~-----~~~v~y~~~~~~~~~~~------~~~~~~~~~~------~~~~~~ 111 (454)
.+.+.-+++... +.+++.+.|..-..+. .-.+.|.+.| ..+.+. -|. ..+... ...++-
T Consensus 486 ~Ce~~~l~~~~~~~~~dsi~lrW~~~~~~d~r~llg~~~~yKEaP-~qNvT~~dg~~aCg~-~~W~~~~v~~~~~~p~~~ 563 (1025)
T KOG4258|consen 486 ICEDLVLQFSSTVTSADSILLRWERYQPPDMRDLLGFLLHYKEAP-FQNVTEEDGRDACGS-NSWNVVDVDPPDLIPNDG 563 (1025)
T ss_pred ecccceeeeeeEEeecceeEEEecccCCcchhhhheeeEeeccCC-ccccceecCcccccc-CcceEEeccCCcCCCccc
Confidence 344444555544 4889999999886441 1245565555 333321 111 111110 011223
Q ss_pred EE-EEEECCCCCCCEEEEEeCc------------cCceeEEECCCC--CCCeEEEEEecC
Q 012895 112 IH-HVKIGPLEPATTYYYRCGG------------RGPEFSFKMPPA--NFPIEFAIVGDL 156 (454)
Q Consensus 112 ~~-~~~l~gL~p~t~Y~Yrv~~------------~s~~~~F~T~p~--~~~~~f~~igD~ 156 (454)
.| ...|.+|+|.|.|-|-|.. .|+...++|.|. ..|+..+..++.
T Consensus 564 ~~~~~~l~~LkP~TqYAvfVkT~t~t~~~~~~~A~S~I~YvqT~~~~PspPl~~ls~sns 623 (1025)
T KOG4258|consen 564 THPGFLLDGLKPWTQYAVFVKTLTVTEAHEAYEAKSKIGYVQTLPDIPSPPLDVLSKSNS 623 (1025)
T ss_pred cccceehhcCCccceeEEEEeeeehhhhccccccccceEEEEecCCCCCCcchhhhccCc
Confidence 44 6789999999999998752 267788999776 455665555554
No 157
>TIGR02855 spore_yabG sporulation peptidase YabG. Members of this family are the protein YabG, demonstrated for Bacillus subtilis to be an endopeptidase able to release N-terminal peptides from a number of sporulation proteins, including CotT, CotF, and SpoIVA. It appears to be expressed under control of sigma-K.
Probab=33.12 E-value=35 Score=32.32 Aligned_cols=50 Identities=26% Similarity=0.414 Sum_probs=33.7
Q ss_pred HHHHHHHHhhccCCCCeEEEEEccccccCCCCCCCCcHHHHHHHHHHHHhcCCc-EEEeccccc
Q 012895 277 KWLKADLAKINRKKTPWIFVLLHAPWYNTNTAHQGEGESMRNSMEELLYNARVD-VVFAGHVHA 339 (454)
Q Consensus 277 ~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~v~-lvl~GH~H~ 339 (454)
++|+.-|+..++-..+ +.-.|.| + .++-+.+.++++++++| +|++||+-.
T Consensus 115 ~YL~~Cl~~Ykql~i~--a~G~~~~----------E-~eqp~~i~~Ll~~~~PDIlViTGHD~~ 165 (283)
T TIGR02855 115 EYLRKCLKLYKKIGVP--VVGIHCK----------E-KEMPEKVLDLIEEVRPDILVITGHDAY 165 (283)
T ss_pred HHHHHHHHHHHHhCCc--eEEEEec----------c-hhchHHHHHHHHHhCCCEEEEeCchhh
Confidence 4688877776543333 3344443 1 13557899999999998 889999954
No 158
>cd02852 Isoamylase_N_term Isoamylase N-terminus domain. Isoamylase (aka glycogen 6-glucanohydrolase) is one of the starch-debranching enzymes that catalyzes the hydrolysis of alpha-1,6-glucosidic linkages specific in alpha-glucans such as amylopectin or glycogen. Isoamylase contains a bound calcium ion, but this is not in the same position as the conserved calcium ion that has been reported in other alpha-amylase family enzymes. The N-terminus of isoamylase may be related to the immunoglobulin and/or fibronectin type III superfamilies. These domains are associated with different types of catalytic domains at either the N-terminal or C-terminal end and may be involved in homodimeric/tetrameric/dodecameric interactions. Members of this family include members of the alpha amylase family, sialidase, galactose oxidase, cellulase, cellulose, hyaluronate lyase, chitobiase, and chitinase.
Probab=33.00 E-value=57 Score=26.56 Aligned_cols=23 Identities=39% Similarity=0.742 Sum_probs=20.4
Q ss_pred CeEEEEEECCCCCCCEEEEEeCc
Q 012895 110 GKIHHVKIGPLEPATTYYYRCGG 132 (454)
Q Consensus 110 ~~~~~~~l~gL~p~t~Y~Yrv~~ 132 (454)
+-++++.|.++.+|+.|.|||..
T Consensus 48 ~gvW~~~v~~~~~g~~Y~y~v~g 70 (119)
T cd02852 48 GDVWHVFVEGLKPGQLYGYRVDG 70 (119)
T ss_pred CCEEEEEECCCCCCCEEEEEECC
Confidence 46888999999999999999974
No 159
>PHA03008 hypothetical protein; Provisional
Probab=32.47 E-value=85 Score=28.20 Aligned_cols=42 Identities=2% Similarity=0.066 Sum_probs=28.6
Q ss_pred EEEEccccccCCCCCCCCcHHHHHHHHHHHHhcCCcEEEecccccce
Q 012895 295 FVLLHAPWYNTNTAHQGEGESMRNSMEELLYNARVDVVFAGHVHAYE 341 (454)
Q Consensus 295 Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~y~ 341 (454)
|+++|-|++.....+.+ .+.|.+-+.+-++.+.+.||.-.|.
T Consensus 164 ILITHgPP~GhLD~~vG-----C~~Ll~~I~rVKPKyHVFGh~~~~~ 205 (234)
T PHA03008 164 ILITASPPFAILDDDLA-----CGDLFSKVIKIKPKFHIFNGLTQFS 205 (234)
T ss_pred EEEeCCCCccccccccC-----cHHHHHHHHHhCCcEEEeCCccccC
Confidence 99999999876543221 1344444456688999999966554
No 160
>PF05582 Peptidase_U57: YabG peptidase U57; InterPro: IPR008764 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. The peptidases families associated with clan U- have an unknown catalytic mechanism as the protein fold of the active site domain and the active site residues have not been reported. This is a group of peptidases belong to MEROPS peptidase family U57 (clan U-). The type example is the YabG protein of Bacillus subtilis. This is a protease involved in the synthesis and maturation of the spore coat proteins SpoIVA and YrbA of B. subtilis [].
Probab=32.23 E-value=42 Score=31.97 Aligned_cols=50 Identities=26% Similarity=0.344 Sum_probs=34.0
Q ss_pred HHHHHHHHhhccCCCCeEEEEEccccccCCCCCCCCcHHHHHHHHHHHHhcCCc-EEEeccccc
Q 012895 277 KWLKADLAKINRKKTPWIFVLLHAPWYNTNTAHQGEGESMRNSMEELLYNARVD-VVFAGHVHA 339 (454)
Q Consensus 277 ~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~v~-lvl~GH~H~ 339 (454)
++|+.-|+..+.-..+ ..-.|.| -.++-+.+.+++.++++| +|++||+=.
T Consensus 116 ~YL~~Cl~~Ykql~i~--a~G~~~~-----------E~eqp~~i~~Ll~~~~PDIlViTGHD~~ 166 (287)
T PF05582_consen 116 EYLNKCLKVYKQLGIP--AVGIHVP-----------EKEQPEKIYRLLEEYRPDILVITGHDGY 166 (287)
T ss_pred HHHHHHHHHHHHcCCc--eEEEEec-----------hHHhhHHHHHHHHHcCCCEEEEeCchhh
Confidence 4688877766442333 3333433 124668899999999998 889999874
No 161
>cd02856 Glycogen_debranching_enzyme_N_term Glycogen_debranching_enzyme N-terminal domain. Glycogen debranching enzymes have both 4-alpha-glucanotransferase and amylo-1,6-glucosidase activities. As a transferase it transfers a segment of a 1,4-alpha-D-glucan to a new 4-position in an acceptor, which may be glucose or another 1,4-alpha-D-glucan. As a glucosidase it catalyzes the endohydrolysis of 1,6-alpha-D-glucoside linkages at points of branching in chains of 1,4-linked alpha-D-glucose residues. The N-terminus of the glycogen debranching enzyme may be related to the immunoglobulin and/or fibronectin type III superfamilies. These domains are associated with different types of catalytic domains at either the N-terminal or C-terminal end and may be involved in homodimeric/tetrameric/dodecameric interactions. Members of this family include members of the alpha amylase family, sialidase, galactose oxidase, cellulase, cellulose, hyaluronate lyase, chitobiase, and chitinase.
Probab=32.19 E-value=60 Score=25.70 Aligned_cols=24 Identities=21% Similarity=0.394 Sum_probs=20.7
Q ss_pred cCeEEEEEECCCCCCCEEEEEeCc
Q 012895 109 SGKIHHVKIGPLEPATTYYYRCGG 132 (454)
Q Consensus 109 ~~~~~~~~l~gL~p~t~Y~Yrv~~ 132 (454)
.+-+.++.+.++.+|+.|.|+|..
T Consensus 43 ~~GvW~~~v~~~~~g~~Y~y~i~g 66 (103)
T cd02856 43 YGGVWHGFLPGIKAGQRYGFRVHG 66 (103)
T ss_pred cCCEEEEEECCCCCCCEEEEEECC
Confidence 456788999999999999999965
No 162
>KOG3818 consensus DNA polymerase epsilon, subunit B [Replication, recombination and repair]
Probab=31.38 E-value=1.3e+02 Score=30.54 Aligned_cols=77 Identities=12% Similarity=0.072 Sum_probs=47.0
Q ss_pred CCCeEEEEEecCCCCCCh-----HHHHHHhhcCCCCeEeecCccccCCCChhhHHHHhhhhhhhh----------cCCCe
Q 012895 145 NFPIEFAIVGDLGQTEWT-----NSTLDHVGSKDYDVFLLPGDLSYADFQQPLWDSFGRLVEPYA----------SSRPW 209 (454)
Q Consensus 145 ~~~~~f~~igD~~~~~~~-----~~~l~~i~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~l~----------~~~P~ 209 (454)
....+|++++|.+.+... .+++..+....|-.+|+.|-+.........-+.+.+-++.|+ .+..+
T Consensus 280 ~~d~~fVfLSdV~LD~~~vm~aL~kifqgy~~~pP~~iIlcG~FtS~p~~~~s~~~~k~~f~~LA~~l~~~~~~~ekT~f 359 (525)
T KOG3818|consen 280 NTDTSFVFLSDVFLDDKKVMEALRKIFQGYKDAPPTAIILCGSFTSSPRQTSSSDQLKDGFRWLAAQLTCFRKDYEKTQF 359 (525)
T ss_pred CcCceEEEEehhccccHHHHHHHHHHHhhccCCCCeEEEEeccccccccccchHHHHHHHHHHHHhhccccccccccceE
Confidence 466789999999876421 223333446678899999999754332222222322222222 23678
Q ss_pred eecCCCcccCCC
Q 012895 210 MVTEGNHEIESI 221 (454)
Q Consensus 210 ~~v~GNHD~~~~ 221 (454)
++|||-.|-...
T Consensus 360 IFVPGP~Dp~~~ 371 (525)
T KOG3818|consen 360 IFVPGPNDPWVD 371 (525)
T ss_pred EEecCCCCCCcC
Confidence 999999998644
No 163
>PRK10799 metal-binding protein; Provisional
Probab=30.70 E-value=1.2e+02 Score=28.40 Aligned_cols=44 Identities=11% Similarity=0.182 Sum_probs=25.1
Q ss_pred EEEEccccccCCCCCCCCcHHHHHHHHHHHHhcCCcEEEecccccce
Q 012895 295 FVLLHAPWYNTNTAHQGEGESMRNSMEELLYNARVDVVFAGHVHAYE 341 (454)
Q Consensus 295 Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~y~ 341 (454)
++++|||++-....... ..........+.++++ .+++-|++.-.
T Consensus 59 lIitHHP~~~~~~~~~~--~~~~~~~~~~li~~~i-~vy~~Htn~D~ 102 (247)
T PRK10799 59 AVIVHHGYFWKGESPVI--RGMKRNRLKTLLANDI-NLYGWHLPLDA 102 (247)
T ss_pred EEEECCchhccCCCccc--cchHHHHHHHHHHCCC-eEEEEecchhh
Confidence 77899998632221111 1123344445566776 67888998743
No 164
>cd02853 MTHase_N_term Maltooligosyl trehalose synthase (MTSase) N-terminus domain. MTSase and maltooligosyl trehalose trehalohydrolase (MTHase) work together to produce trehalose. MTSase is responsible for converting the alpha-1,4-glucosidic linkage to an alpha,alpha-1,1-glucosidic linkage at the reducing end of the maltooligosaccharide through an intramolecular transglucosylation reaction, while MTHase hydrolyzes the penultimate alpha-1,4 linkage of the reducing end, resulting in the release of trehalose. The N-terminus of MTSase may be related to the immunoglobulin and/or fibronectin type III superfamilies. These domains are associated with different types of catalytic domains at either the N-terminal or C-terminal end and may be involved in homodimeric/tetrameric/dodecameric interactions. Members of this family include members of the alpha amylase family, sialidase, galactose oxidase, cellulase, cellulose, hyaluronate lyase, chitobiase, and chitinase.
Probab=30.31 E-value=64 Score=24.50 Aligned_cols=22 Identities=18% Similarity=0.271 Sum_probs=18.5
Q ss_pred CeEEEEEECCCCCCCEEEEEeCc
Q 012895 110 GKIHHVKIGPLEPATTYYYRCGG 132 (454)
Q Consensus 110 ~~~~~~~l~gL~p~t~Y~Yrv~~ 132 (454)
+-++++.+.++ +|..|.|+|..
T Consensus 39 ~G~W~~~v~~~-~g~~Y~y~v~~ 60 (85)
T cd02853 39 DGWFEAEVPGA-AGTRYRYRLDD 60 (85)
T ss_pred CcEEEEEeCCC-CCCeEEEEECC
Confidence 34677889999 99999999973
No 165
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=29.99 E-value=2.1e+02 Score=31.68 Aligned_cols=96 Identities=15% Similarity=0.259 Sum_probs=62.3
Q ss_pred cccccCCCCCccccCCCCCCCCCeeEEEEecCCCcEEEEEEeCCC-CCccEEEEeecCCC----C-ceEEEeEeEEEeee
Q 012895 32 EYYIRQPPRSVIQTPNKRSESDPQQVHISLAAKDYIRVSWITDDK-EAESVVEYGKLPGR----Y-NTVATGEHTSYQFF 105 (454)
Q Consensus 32 ~~~~r~~~~~~~~~~~~~~~~~p~~v~l~~~~~~~~~v~W~t~~~-~~~~~v~y~~~~~~----~-~~~~~~~~~~~~~~ 105 (454)
..|.|-+ ....+||=+.+..+|..+... .+.+++.+.|.-+.. .++.-|.|...=.. . ....-+....|..
T Consensus 314 ~gyyRA~-~Dp~~mpCT~PPSaP~nlis~-vn~Ts~~L~W~~P~d~GGR~Di~y~v~Ck~c~~~~~~C~~Cg~~V~f~P- 390 (996)
T KOG0196|consen 314 NGYYRAD-SDPPSMPCTRPPSAPRNLISN-VNGTSLILEWSPPADTGGREDITYNVICKKCGGGRGACEPCGDNVRFTP- 390 (996)
T ss_pred CCcccCC-CCCCCCCCCCCCCccceeeee-cccceEEEEecCCcccCCCcceEEEEEeeccCCCCCccccCCCCceECC-
Confidence 3477766 677788888889999887655 668999999998854 35666776653111 0 1111221122221
Q ss_pred eeecC-eEEEEEECCCCCCCEEEEEeC
Q 012895 106 FYKSG-KIHHVKIGPLEPATTYYYRCG 131 (454)
Q Consensus 106 ~~~~~-~~~~~~l~gL~p~t~Y~Yrv~ 131 (454)
...+ ..-+|.+++|.|-+.|.+.|.
T Consensus 391 -~q~gLt~~~V~v~~L~ah~~YTFeV~ 416 (996)
T KOG0196|consen 391 -RQRGLTETSVTVSDLLAHTNYTFEVE 416 (996)
T ss_pred -CCCCcccceEEEeccccccccEEEEE
Confidence 1222 355688999999999999985
No 166
>PF09294 Interfer-bind: Interferon-alpha/beta receptor, fibronectin type III; InterPro: IPR015373 Members of this family adopt a secondary structure consisting of seven beta-strands arranged in an immunoglobulin-like beta-sandwich, in a Greek-key topology. They are required for binding to interferon-alpha []. ; PDB: 1A21_A 3LQM_B 3ELA_T 1AHW_C 2A2Q_T 1TFH_B 1FAK_T 1WSS_T 1W2K_T 2FIR_T ....
Probab=29.41 E-value=45 Score=26.29 Aligned_cols=19 Identities=26% Similarity=0.485 Sum_probs=14.2
Q ss_pred EEEECCCCCCCEEEEEeCc
Q 012895 114 HVKIGPLEPATTYYYRCGG 132 (454)
Q Consensus 114 ~~~l~gL~p~t~Y~Yrv~~ 132 (454)
.++|.+|+|++.|..+|..
T Consensus 68 ~~~l~~L~p~t~YCv~V~~ 86 (106)
T PF09294_consen 68 SVTLSDLKPGTNYCVSVQA 86 (106)
T ss_dssp EEEEES--TTSEEEEEEEE
T ss_pred EEEEeCCCCCCCEEEEEEE
Confidence 3579999999999999864
No 167
>PF02402 Lysis_col: Lysis protein; InterPro: IPR003059 The DNA sequence of the entire colicin E2 operon has been determined []. The operon comprises the colicin activity gene (ceaB), the colicin immunity gene (ceiB) and the lysis gene (celB), which is essential for colicin release from producing cells []. A putative LexA binding site is located upstream from ceaB, and a rho-independent terminator structure is located downstream from celB []. Comparison of the amino acid sequences of colicin E2 and cloacin DF13 reveal extensive similarity. These colicins have different modes of action and recognise different cell surface receptors; the two major regions of heterology at the C terminus, and in the C-terminal end of the central region are thought to correspond to the catalytic and receptor-recognition domains, respectively []. Sequence similarities between colicins E2, A and E1 [] are less striking. The colicin E2 (pyocin) immunity protein does not share similarity with either the colicin E3 or cloacin DF13 [] immunity proteins. By contrast, the lysis proteins of the ColE2, ColE1 and CloDF13 plasmids are almost identical except in the N-terminal regions, which themselves are similar to lipoprotein signal peptides []. Processing of the ColE2 prolysis protein to the mature form is prevented by globomycin, a specific inhibitor of the lipoprotein signal peptidase []. The mature ColE2 lysis protein is located in the cell envelope [].; GO: 0009405 pathogenesis, 0019835 cytolysis, 0019867 outer membrane
Probab=28.52 E-value=27 Score=23.03 Aligned_cols=17 Identities=29% Similarity=0.143 Sum_probs=12.5
Q ss_pred CCCCCCCCcccCCCccc
Q 012895 434 ITDGQESSSSSSSSSVT 450 (454)
Q Consensus 434 ~~~~~~~~~~~~~~~~~ 450 (454)
.+-+++++|.||+|-+|
T Consensus 25 RDvqGGtVaPSSss~lT 41 (46)
T PF02402_consen 25 RDVQGGTVAPSSSSELT 41 (46)
T ss_pred ecCCCceECCCccceee
Confidence 34466888888888776
No 168
>PRK11449 putative deoxyribonuclease YjjV; Provisional
Probab=27.37 E-value=84 Score=29.73 Aligned_cols=141 Identities=16% Similarity=0.149 Sum_probs=73.6
Q ss_pred HHHHHHhhcCCCCeEeecCccccCCCChhhHHHHhhhhhhhhcCCCeeecCCCcccCCCCCCCcchhhhhhhhccCCCCC
Q 012895 163 NSTLDHVGSKDYDVFLLPGDLSYADFQQPLWDSFGRLVEPYASSRPWMVTEGNHEIESIPIILPHAFKAYNARWLMPYEE 242 (454)
Q Consensus 163 ~~~l~~i~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~p~~~ 242 (454)
..+++.+.+.+...++..|-- ...|+...++.+.. -.++++.|=|=....... ........+......
T Consensus 22 ~~~l~~a~~~gv~~~~~~~~~------~~~~~~~~~l~~~~---~~v~~~~GiHP~~~~~~~-~~~~~~l~~~l~~~~-- 89 (258)
T PRK11449 22 EASLQRAAQAGVGKIIVPATE------AENFARVLALAERY---QPLYAALGLHPGMLEKHS-DVSLDQLQQALERRP-- 89 (258)
T ss_pred HHHHHHHHHCCCCEEEEeeCC------HHHHHHHHHHHHhC---CCEEEEEeeCcCccccCC-HHHHHHHHHHHHhCC--
Confidence 356777767777777776642 23455444433322 247888888854321110 111222222121100
Q ss_pred CCCCCCceEEEEeCeEEEEEecccCCCCCCHHHHHHHHHHHHhhccCCCCeEEEEEccccccCCCCCCCCcHHHHHHHHH
Q 012895 243 SGSSSNLYYSFDIAGAHIIMLGSYTDFDEDSAQYKWLKADLAKINRKKTPWIFVLLHAPWYNTNTAHQGEGESMRNSMEE 322 (454)
Q Consensus 243 ~~~~~~~~ys~~~g~v~fi~Lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ 322 (454)
.. +-.+==|+||-+........|.+++++.|+-+.+-+.| |+.|..- ..+.+.+
T Consensus 90 -----~~-----~~aIGEiGLD~~~~~~~~~~Q~~vf~~ql~lA~~~~~P---v~iH~r~-------------a~~~~~~ 143 (258)
T PRK11449 90 -----AK-----VVAVGEIGLDLFGDDPQFERQQWLLDEQLKLAKRYDLP---VILHSRR-------------THDKLAM 143 (258)
T ss_pred -----CC-----EEEEEecccCCCCCCCCHHHHHHHHHHHHHHHHHhCCC---EEEEecC-------------ccHHHHH
Confidence 00 11133467775432223468999999999987664544 4567641 1146667
Q ss_pred HHHhcCCcEEEecccccceee
Q 012895 323 LLYNARVDVVFAGHVHAYERF 343 (454)
Q Consensus 323 ll~~~~v~lvl~GH~H~y~r~ 343 (454)
++.++++. ..|..|.|.-.
T Consensus 144 il~~~~~~--~~~i~H~fsG~ 162 (258)
T PRK11449 144 HLKRHDLP--RTGVVHGFSGS 162 (258)
T ss_pred HHHhcCCC--CCeEEEcCCCC
Confidence 77777642 24567776643
No 169
>cd02860 Pullulanase_N_term Pullulanase domain N-terminus. Pullulanase (AKA dextrinase; alpha-dextrin endo-1,6-alpha glucosidase) is an enzyme with action similar to that of isoamylase; it cleaves 1,6-alpha-glucosidic linkages in pullulan, amylopectin, and glycogen, and in alpha-and beta-amylase limit-dextrins of amylopectin and glycogen. The N-terminus of pullulanase may be related to the immunoglobulin and/or fibronectin type III superfamilies. These domains are associated with different types of catalytic domains at either the N-terminal or C-terminal end and may be involved in homodimeric/tetrameric/dodecameric interactions. Members of this family include members of the alpha amylase family, sialidase, galactose oxidase, cellulase, cellulose, hyaluronate lyase, chitobiase, and chitinase.
Probab=27.36 E-value=80 Score=24.74 Aligned_cols=25 Identities=12% Similarity=0.086 Sum_probs=21.0
Q ss_pred ecCeEEEEEECCCCCCCEEEEEeCc
Q 012895 108 KSGKIHHVKIGPLEPATTYYYRCGG 132 (454)
Q Consensus 108 ~~~~~~~~~l~gL~p~t~Y~Yrv~~ 132 (454)
..+-++++.+.++.+|..|.|+|..
T Consensus 44 ~~~gvw~~~v~~~~~g~~Y~y~i~~ 68 (100)
T cd02860 44 GENGVWSVTLDGDLEGYYYLYEVKV 68 (100)
T ss_pred CCCCEEEEEeCCccCCcEEEEEEEE
Confidence 3456788999999999999999964
No 170
>TIGR00486 YbgI_SA1388 dinuclear metal center protein, YbgI/SA1388 family. The characterization of this family of uncharacterized proteins as orthologous is tentative. Members are found in all three domains of life. Several members (from Bacillus subtilis, Listeria monocytogenes, and Mycobacterium tuberculosis - all classified as Firmicutes within the Eubacteria) share a long insert relative to other members.
Probab=27.16 E-value=1.4e+02 Score=27.98 Aligned_cols=43 Identities=12% Similarity=0.259 Sum_probs=24.1
Q ss_pred EEEEEccccccCCCCCCCCcHHHHHHHHHHHHhcCCcEEEeccccc
Q 012895 294 IFVLLHAPWYNTNTAHQGEGESMRNSMEELLYNARVDVVFAGHVHA 339 (454)
Q Consensus 294 ~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~ 339 (454)
-++++|||++-......... ...+.+ ..+.++++ .+++-|+..
T Consensus 59 dlIitHHP~~f~~~~~~~~~-~~~~~~-~~li~~~I-~vy~~Ht~l 101 (249)
T TIGR00486 59 DLIITHHPLIWKPLKRLIRG-IKPGRL-KILLQNDI-SLYSAHTNL 101 (249)
T ss_pred CEEEEcCccccCCcccccCC-CHHHHH-HHHHHCCC-eEEEeecch
Confidence 38889999853321111111 123344 44667777 678888875
No 171
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=26.91 E-value=73 Score=25.39 Aligned_cols=30 Identities=17% Similarity=0.267 Sum_probs=17.8
Q ss_pred CCeEEEEEecCCCCCChHHHHHHhhcCCCCeE
Q 012895 146 FPIEFAIVGDLGQTEWTNSTLDHVGSKDYDVF 177 (454)
Q Consensus 146 ~~~~f~~igD~~~~~~~~~~l~~i~~~~pd~v 177 (454)
...+|+.+||.++.. .+++.++.+.-|+-|
T Consensus 63 P~~kfiLIGDsgq~D--peiY~~ia~~~P~~i 92 (100)
T PF09949_consen 63 PERKFILIGDSGQHD--PEIYAEIARRFPGRI 92 (100)
T ss_pred CCCcEEEEeeCCCcC--HHHHHHHHHHCCCCE
Confidence 346777777776543 556666655545443
No 172
>TIGR03000 plancto_dom_1 Planctomycetes uncharacterized domain TIGR03000. Domains described by this model are found, so far, only in the Planctomycetes (Pirellula sp. strain 1 and Gemmata obscuriglobus), in up to six proteins per genome, and may be duplicated within a protein. The function is unknown.
Probab=25.89 E-value=1.5e+02 Score=22.31 Aligned_cols=24 Identities=25% Similarity=0.524 Sum_probs=18.4
Q ss_pred cCeEEEEEECCCCCCCEEEEEeCc
Q 012895 109 SGKIHHVKIGPLEPATTYYYRCGG 132 (454)
Q Consensus 109 ~~~~~~~~l~gL~p~t~Y~Yrv~~ 132 (454)
.|-.+...=.+|++|..|.|+|..
T Consensus 25 ~G~~R~F~T~~L~~G~~y~Y~v~a 48 (75)
T TIGR03000 25 TGTVRTFTTPPLEAGKEYEYTVTA 48 (75)
T ss_pred CccEEEEECCCCCCCCEEEEEEEE
Confidence 344555556799999999999864
No 173
>PF13473 Cupredoxin_1: Cupredoxin-like domain; PDB: 1IBZ_D 1IC0_E 1IBY_D.
Probab=24.81 E-value=1.2e+02 Score=24.02 Aligned_cols=67 Identities=13% Similarity=0.283 Sum_probs=30.0
Q ss_pred CCCCCCCeeEEEEecCCCcEEEEEEeCCCCCccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEE
Q 012895 48 KRSESDPQQVHISLAAKDYIRVSWITDDKEAESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYY 127 (454)
Q Consensus 48 ~~~~~~p~~v~l~~~~~~~~~v~W~t~~~~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~ 127 (454)
......|..+.+..| ..++|.|.-.+. ....++... ..... . -..+-.-.+.++.++||+ |.
T Consensus 28 ~~~~f~P~~i~v~~G--~~v~l~~~N~~~-~~h~~~i~~----~~~~~--~--------l~~g~~~~~~f~~~~~G~-y~ 89 (104)
T PF13473_consen 28 TDFGFSPSTITVKAG--QPVTLTFTNNDS-RPHEFVIPD----LGISK--V--------LPPGETATVTFTPLKPGE-YE 89 (104)
T ss_dssp --EEEES-EEEEETT--CEEEEEEEE-SS-S-EEEEEGG----GTEEE--E--------E-TT-EEEEEEEE-S-EE-EE
T ss_pred cCCeEecCEEEEcCC--CeEEEEEEECCC-CcEEEEECC----CceEE--E--------ECCCCEEEEEEcCCCCEE-EE
Confidence 345667777666655 357788876653 223333222 11110 0 123444555667788885 77
Q ss_pred EEeCc
Q 012895 128 YRCGG 132 (454)
Q Consensus 128 Yrv~~ 132 (454)
|.|..
T Consensus 90 ~~C~~ 94 (104)
T PF13473_consen 90 FYCTM 94 (104)
T ss_dssp EB-SS
T ss_pred EEcCC
Confidence 77654
No 174
>PRK10425 DNase TatD; Provisional
Probab=23.91 E-value=1.1e+02 Score=29.07 Aligned_cols=141 Identities=16% Similarity=0.126 Sum_probs=70.4
Q ss_pred HHHHHHhhcCCCCeEeecCccccCCCChhhHHHHhhhhhhhhcCCCeeecCCCcccCCCCCCCcchhhhhhhhccCCCCC
Q 012895 163 NSTLDHVGSKDYDVFLLPGDLSYADFQQPLWDSFGRLVEPYASSRPWMVTEGNHEIESIPIILPHAFKAYNARWLMPYEE 242 (454)
Q Consensus 163 ~~~l~~i~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~p~~~ 242 (454)
.++++...+.+...++..|--. ..|....++.+.. -.++++.|=|=...... ..............+
T Consensus 18 ~~vl~~a~~~gv~~~i~~~~~~------~~~~~~~~l~~~~---~~v~~~~GiHP~~~~~~-~~~~~~~l~~~~~~~--- 84 (258)
T PRK10425 18 DDVVARAFAAGVNGMLITGTNL------RESQQAQKLARQY---PSCWSTAGVHPHDSSQW-QAATEEAIIELAAQP--- 84 (258)
T ss_pred HHHHHHHHHCCCCEEEEeCCCH------HHHHHHHHHHHhC---CCEEEEEEeCcCccccC-CHHHHHHHHHhccCC---
Confidence 4566666666766676666432 3454444433322 23777888885421110 011111111111100
Q ss_pred CCCCCCceEEEEeCeEEEEEecccCCCCCCHHHHHHHHHHHHhhccCCCCeEEEEEccccccCCCCCCCCcHHHHHHHHH
Q 012895 243 SGSSSNLYYSFDIAGAHIIMLGSYTDFDEDSAQYKWLKADLAKINRKKTPWIFVLLHAPWYNTNTAHQGEGESMRNSMEE 322 (454)
Q Consensus 243 ~~~~~~~~ys~~~g~v~fi~Lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ 322 (454)
. +-.+==|+||-+........|.++++.+|+-+.+-+.| |+.|.+ .. -+.+.+
T Consensus 85 -----~------~vaIGEiGLDy~~~~~~~~~Q~~vF~~ql~lA~~~~~P---v~iH~r----~a---------~~~~l~ 137 (258)
T PRK10425 85 -----E------VVAIGECGLDFNRNFSTPEEQERAFVAQLAIAAELNMP---VFMHCR----DA---------HERFMA 137 (258)
T ss_pred -----C------EEEEeeeeeccccCCCCHHHHHHHHHHHHHHHHHhCCC---eEEEEe----Cc---------hHHHHH
Confidence 0 00123467775433233478999999999887654444 466876 10 145566
Q ss_pred HHHhcCCcEEEecccccceeee
Q 012895 323 LLYNARVDVVFAGHVHAYERFT 344 (454)
Q Consensus 323 ll~~~~v~lvl~GH~H~y~r~~ 344 (454)
+|+++... .-.|+.|.|....
T Consensus 138 iL~~~~~~-~~~~i~H~fsG~~ 158 (258)
T PRK10425 138 LLEPWLDK-LPGAVLHCFTGTR 158 (258)
T ss_pred HHHHhccC-CCCeEEEecCCCH
Confidence 66665211 1135568766543
No 175
>cd04502 SGNH_hydrolase_like_7 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid.
Probab=20.56 E-value=2.4e+02 Score=24.17 Aligned_cols=34 Identities=21% Similarity=0.269 Sum_probs=15.9
Q ss_pred cCCCCeEee-cC--ccccCCCChhhHHHHhhhhhhhh
Q 012895 171 SKDYDVFLL-PG--DLSYADFQQPLWDSFGRLVEPYA 204 (454)
Q Consensus 171 ~~~pd~vl~-~G--Dl~y~~~~~~~~~~~~~~~~~l~ 204 (454)
..+||.|++ .| |+......+..-+.+.++++.+.
T Consensus 48 ~~~p~~vvi~~G~ND~~~~~~~~~~~~~~~~lv~~i~ 84 (171)
T cd04502 48 PYQPRRVVLYAGDNDLASGRTPEEVLRDFRELVNRIR 84 (171)
T ss_pred cCCCCEEEEEEecCcccCCCCHHHHHHHHHHHHHHHH
Confidence 457887655 33 65432222222233444555444
No 176
>PF13941 MutL: MutL protein
Probab=20.41 E-value=2.8e+02 Score=28.72 Aligned_cols=77 Identities=16% Similarity=0.205 Sum_probs=44.2
Q ss_pred ECCCCCCCeEEEEEecCCC----------------------CCChHHHHHHhhcCCCCeEeecCccccCCCChhhHHHHh
Q 012895 140 KMPPANFPIEFAIVGDLGQ----------------------TEWTNSTLDHVGSKDYDVFLLPGDLSYADFQQPLWDSFG 197 (454)
Q Consensus 140 ~T~p~~~~~~f~~igD~~~----------------------~~~~~~~l~~i~~~~pd~vl~~GDl~y~~~~~~~~~~~~ 197 (454)
-|..+.+.+|++++|=... ......-++.|...+||+||++|=.=+ +..... -...
T Consensus 69 a~SSAaGGLrmvv~Glv~~~Ta~AAk~AAlgAGA~V~~v~s~~l~~~~l~~i~~~~PDiILLaGGtDg-G~~~~i-l~nA 146 (457)
T PF13941_consen 69 ACSSAAGGLRMVVIGLVPDLTAEAAKRAALGAGARVLQVYSYELTEEDLEEIREIRPDIILLAGGTDG-GNKEVI-LHNA 146 (457)
T ss_pred EECCCCCcceEEEEecCHHHHHHHHHHHHhcCCcEEEEEeccCCCHHHHHHHhccCCCEEEEeCCccC-CchHHH-HHHH
Confidence 3344467788888874311 123355677888999999999996632 211111 1112
Q ss_pred hhhhhhhcCCCeeecCCCcccC
Q 012895 198 RLVEPYASSRPWMVTEGNHEIE 219 (454)
Q Consensus 198 ~~~~~l~~~~P~~~v~GNHD~~ 219 (454)
+.+..+.-.+|+ ...||-+..
T Consensus 147 ~~La~~~~~~pV-IyAGN~~a~ 167 (457)
T PF13941_consen 147 EMLAEANLRIPV-IYAGNKAAQ 167 (457)
T ss_pred HHHHhCCCCCcE-EEECCHHHH
Confidence 333333334675 478998874
Done!