Query 012895
Match_columns 454
No_of_seqs 464 out of 2908
Neff 8.8
Searched_HMMs 29240
Date Mon Mar 25 18:18:55 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012895.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/012895hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1xzw_A Purple acid phosphatase 100.0 1.2E-67 4E-72 538.3 44.2 378 49-426 20-423 (426)
2 2qfp_A Purple acid phosphatase 100.0 1.6E-66 5.6E-71 529.6 43.2 384 49-432 14-422 (424)
3 2yeq_A Apased, PHOD, alkaline 100.0 1.5E-38 5.2E-43 329.6 34.6 348 54-411 8-461 (527)
4 3tgh_A Glideosome-associated p 100.0 4.7E-35 1.6E-39 286.8 22.7 251 146-427 2-309 (342)
5 1ute_A Protein (II purple acid 100.0 2E-31 6.9E-36 259.0 20.9 261 141-427 1-305 (313)
6 3ib7_A ICC protein; metallopho 99.9 4.1E-24 1.4E-28 209.3 20.6 238 145-413 23-282 (330)
7 3d03_A Phosphohydrolase; glyce 99.9 1.6E-22 5.5E-27 192.5 22.1 232 148-410 1-255 (274)
8 2nxf_A Putative dimetal phosph 99.9 2.4E-22 8.3E-27 195.4 18.9 225 145-407 3-311 (322)
9 2xmo_A LMO2642 protein; phosph 99.8 2.3E-19 7.8E-24 183.1 24.4 197 145-343 37-288 (443)
10 1uf3_A Hypothetical protein TT 99.6 5.1E-16 1.8E-20 143.1 9.8 171 146-338 4-190 (228)
11 2yvt_A Hypothetical protein AQ 99.6 2.5E-15 8.6E-20 141.7 12.0 181 147-338 5-222 (260)
12 2q8u_A Exonuclease, putative; 99.6 3.6E-15 1.2E-19 146.4 13.4 244 145-422 16-289 (336)
13 1z2w_A Vacuolar protein sortin 99.5 7.5E-12 2.6E-16 112.5 21.0 179 146-424 9-191 (192)
14 3rl5_A Metallophosphoesterase 99.5 6.5E-13 2.2E-17 126.4 13.9 204 145-366 57-277 (296)
15 2a22_A Vacuolar protein sortin 99.4 2.5E-12 8.5E-17 117.8 16.6 186 147-423 25-214 (215)
16 3av0_A DNA double-strand break 99.4 3.8E-12 1.3E-16 127.1 18.7 179 145-342 18-212 (386)
17 3qfm_A SAPH, putative uncharac 99.4 2.1E-12 7.1E-17 122.5 13.7 221 145-410 9-230 (270)
18 3tho_B Exonuclease, putative; 99.4 3.1E-12 1E-16 127.4 15.2 188 148-343 1-217 (379)
19 1nnw_A Hypothetical protein; s 99.4 5.6E-13 1.9E-17 125.1 9.1 187 148-366 2-197 (252)
20 3ck2_A Conserved uncharacteriz 99.4 2.5E-11 8.5E-16 107.5 17.6 159 147-413 6-165 (176)
21 1xm7_A Hypothetical protein AQ 99.3 3.4E-11 1.2E-15 108.4 12.6 137 147-342 1-153 (195)
22 3rqz_A Metallophosphoesterase; 99.2 2.6E-11 8.9E-16 113.4 10.0 152 146-340 2-154 (246)
23 2kkn_A Uncharacterized protein 99.2 4.8E-10 1.6E-14 99.3 16.7 62 146-218 21-85 (178)
24 1ii7_A MRE11 nuclease; RAD50, 99.2 7.6E-11 2.6E-15 115.3 12.0 72 148-219 1-88 (333)
25 1s3l_A Hypothetical protein MJ 99.2 9E-11 3.1E-15 105.2 10.7 63 147-219 25-88 (190)
26 3t1i_A Double-strand break rep 99.2 2.7E-09 9.1E-14 106.8 22.0 243 142-424 27-336 (431)
27 4fbk_A DNA repair and telomere 99.2 1.8E-09 6.1E-14 108.4 20.7 244 144-424 73-380 (472)
28 4fbw_A DNA repair protein RAD3 99.2 1.5E-09 5E-14 108.2 19.3 246 144-425 10-318 (417)
29 1su1_A Hypothetical protein YF 98.9 1.9E-08 6.6E-13 91.2 13.1 70 147-218 25-100 (208)
30 1hp1_A 5'-nucleotidase; metall 98.8 7.7E-09 2.6E-13 107.1 10.0 188 145-341 6-232 (516)
31 2z1a_A 5'-nucleotidase; metal- 98.8 1.4E-08 4.9E-13 105.8 10.0 175 145-342 27-244 (552)
32 3qfk_A Uncharacterized protein 98.8 9.4E-08 3.2E-12 99.1 15.9 190 145-342 17-253 (527)
33 4h2g_A 5'-nucleotidase; dimer, 98.6 6.8E-08 2.3E-12 100.5 9.5 176 145-341 23-245 (546)
34 2wdc_A SOXB, sulfur oxidation 98.6 4.9E-07 1.7E-11 94.2 15.5 150 165-341 110-291 (562)
35 3ztv_A NAD nucleotidase, NADN; 98.6 2.5E-07 8.5E-12 96.9 12.7 175 146-341 11-231 (579)
36 3ive_A Nucleotidase; structura 98.6 3.1E-07 1.1E-11 94.8 12.8 186 146-340 5-237 (509)
37 1g5b_A Serine/threonine protei 98.6 4.4E-08 1.5E-12 89.7 5.3 68 145-219 10-79 (221)
38 1t70_A Phosphatase; crystal, X 98.3 1.2E-05 4.1E-10 74.5 14.6 180 148-360 1-192 (255)
39 1t71_A Phosphatase, conserved 98.3 1.1E-05 3.8E-10 75.8 14.1 185 146-360 3-202 (281)
40 3gve_A YFKN protein; alpha-bet 98.3 8.4E-06 2.9E-10 79.4 13.7 186 146-340 10-253 (341)
41 2z06_A Putative uncharacterize 98.3 1.9E-05 6.5E-10 72.9 15.3 181 148-360 1-189 (252)
42 3c9f_A 5'-nucleotidase; 2',3'- 98.2 3.3E-05 1.1E-09 80.1 16.3 183 145-341 13-243 (557)
43 3jyf_A 2',3'-cyclic nucleotide 98.0 5.3E-05 1.8E-09 73.6 12.4 185 146-341 7-247 (339)
44 4h1s_A 5'-nucleotidase; hydrol 97.9 0.00018 6.3E-09 74.4 14.7 172 147-340 3-222 (530)
45 2qjc_A Diadenosine tetraphosph 97.5 5.3E-05 1.8E-09 71.0 3.6 64 148-218 19-84 (262)
46 2dfj_A Diadenosinetetraphospha 97.4 0.00012 4.1E-09 69.1 4.7 67 148-219 1-69 (280)
47 2edd_A Netrin receptor DCC; tu 97.2 0.0024 8.1E-08 52.1 10.1 82 50-144 18-117 (123)
48 2ede_A Netrin receptor DCC; tu 97.2 0.0031 1.1E-07 50.1 10.7 85 50-144 8-108 (114)
49 2edy_A Receptor-type tyrosine- 97.2 0.00076 2.6E-08 52.6 6.9 80 51-143 9-102 (103)
50 2ie4_C PP2A-alpha;, serine/thr 97.1 0.00052 1.8E-08 65.6 5.4 70 147-219 49-121 (309)
51 2z72_A Protein-tyrosine-phosph 97.0 0.00049 1.7E-08 66.9 5.3 72 145-219 68-153 (342)
52 2haz_A N-CAM 1, neural cell ad 97.0 0.0048 1.7E-07 48.4 9.9 82 54-143 10-104 (105)
53 1x5f_A Neogenin; RGM binding, 97.0 0.0072 2.5E-07 48.4 11.0 83 52-144 19-114 (120)
54 1x5j_A Neogenin; RGM binding, 96.9 0.0023 7.7E-08 51.4 7.5 83 51-144 9-107 (113)
55 1x4y_A Biregional cell adhesio 96.9 0.0054 1.8E-07 48.9 9.7 83 51-144 9-108 (114)
56 2djs_A Ephrin type-B receptor 96.9 0.0034 1.2E-07 49.4 8.4 81 53-144 10-102 (108)
57 1fjm_A Protein serine/threonin 96.9 0.00082 2.8E-08 64.7 5.4 69 148-219 57-128 (330)
58 1x4x_A Fibronectin type-III do 96.9 0.0026 9E-08 50.1 7.5 79 53-144 10-100 (106)
59 2ed8_A Netrin receptor DCC; tu 96.9 0.0082 2.8E-07 46.9 10.3 78 53-143 10-99 (106)
60 2dm4_A Sortilin-related recept 96.9 0.011 3.8E-07 46.4 11.0 79 52-143 9-101 (108)
61 1x5l_A Ephrin type-A receptor 96.8 0.0063 2.2E-07 48.0 8.8 81 53-144 13-105 (111)
62 3icf_A PPT, serine/threonine-p 96.8 0.0021 7.2E-08 61.8 6.8 72 145-219 61-136 (335)
63 2ee2_A Contactin-1; neural cel 96.7 0.01 3.5E-07 47.6 9.7 85 51-144 19-113 (119)
64 1x5g_A Neogenin; RGM binding, 96.7 0.005 1.7E-07 49.0 7.7 80 52-144 19-110 (116)
65 2dle_A Receptor-type tyrosine- 96.6 0.017 5.9E-07 45.4 10.4 78 52-144 9-97 (104)
66 2dkm_A Collagen alpha-1(XX) ch 96.6 0.0067 2.3E-07 47.6 7.9 83 52-144 10-99 (104)
67 1x5a_A Ephrin type-A receptor 96.6 0.0047 1.6E-07 48.8 7.0 78 53-145 12-102 (107)
68 2rb8_A Tenascin; beta sheet,lo 96.6 0.016 5.4E-07 45.4 9.9 82 52-144 4-94 (104)
69 2e7h_A Ephrin type-B receptor 96.6 0.0066 2.2E-07 47.9 7.6 80 53-144 10-103 (109)
70 2ed7_A Netrin receptor DCC; tu 96.5 0.01 3.4E-07 47.4 8.7 83 52-144 19-113 (119)
71 3e0j_A DNA polymerase subunit 96.5 0.021 7.3E-07 57.2 12.7 138 145-285 198-378 (476)
72 3e7a_A PP-1A, serine/threonine 96.5 0.0029 9.8E-08 59.9 6.0 68 149-219 57-127 (299)
73 1va9_A DOWN syndrome cell adhe 96.5 0.015 5E-07 46.6 9.6 87 52-144 17-117 (122)
74 3h63_A Serine/threonine-protei 96.5 0.0033 1.1E-07 59.9 6.4 71 146-219 58-132 (315)
75 3ll8_A Serine/threonine-protei 96.5 0.0023 7.7E-08 61.9 5.3 69 148-219 70-141 (357)
76 2dmk_A Midline 2 isoform 2; mi 96.5 0.014 4.8E-07 47.6 9.4 82 51-144 16-118 (127)
77 2dju_A Receptor-type tyrosine- 96.5 0.013 4.5E-07 45.5 8.9 81 52-144 9-100 (106)
78 1x5x_A Fibronectin type-III do 96.4 0.013 4.3E-07 46.1 8.5 80 54-144 11-103 (109)
79 2ed9_A Netrin receptor DCC; tu 96.4 0.015 5.3E-07 46.7 9.1 81 51-143 29-123 (124)
80 1x5z_A Receptor-type tyrosine- 96.4 0.009 3.1E-07 47.3 7.5 81 52-144 19-109 (115)
81 3n1f_C Cell adhesion molecule- 96.4 0.024 8.2E-07 44.2 9.7 72 51-132 5-84 (102)
82 1wfo_A Sidekick 2; FN3, cell a 96.4 0.0093 3.2E-07 48.5 7.6 83 52-144 29-124 (130)
83 1wao_1 Serine/threonine protei 96.4 0.0044 1.5E-07 63.0 6.7 70 146-218 211-284 (477)
84 1k85_A Chitinase A1; fibronect 96.3 0.041 1.4E-06 41.3 10.4 66 52-132 5-70 (88)
85 2edx_A Protein tyrosine phosph 96.3 0.029 9.8E-07 45.6 10.1 85 51-143 19-117 (134)
86 1aui_A Calcineurin, serine/thr 96.3 0.0037 1.3E-07 63.1 5.2 69 148-219 83-154 (521)
87 2dbj_A Proto-oncogene tyrosine 96.2 0.049 1.7E-06 43.9 11.0 86 50-144 18-118 (124)
88 3b83_A Ten-D3; beta sheet, com 96.2 0.047 1.6E-06 42.2 10.3 69 53-132 4-74 (100)
89 1x5h_A Neogenin; RGM binding, 96.2 0.039 1.3E-06 44.8 10.3 83 51-143 19-115 (132)
90 1wk0_A KIAA0970 protein; fibro 96.1 0.01 3.4E-07 49.4 6.3 32 113-144 82-121 (137)
91 3tes_A Tencon; fibronectin typ 96.1 0.026 8.9E-07 43.7 8.4 70 53-132 4-74 (98)
92 2yuw_A Myosin binding protein 96.1 0.023 7.8E-07 44.7 8.2 71 52-132 9-84 (110)
93 1x3d_A Fibronectin type-III do 96.0 0.029 1E-06 44.6 8.8 81 53-144 20-112 (118)
94 2cuh_A Tenascin-X; fibronectin 96.0 0.041 1.4E-06 43.7 9.5 81 52-144 9-97 (115)
95 3teu_A Fibcon; FN3 domain, fib 96.0 0.047 1.6E-06 41.9 9.5 71 52-132 3-74 (98)
96 2dlh_A Receptor-type tyrosine- 96.0 0.013 4.3E-07 46.9 6.3 83 51-144 19-115 (121)
97 1x4z_A Biregional cell adhesio 96.0 0.027 9.4E-07 45.1 8.4 72 52-132 19-95 (121)
98 3k2m_C Monobody HA4; engineere 96.0 0.032 1.1E-06 43.3 8.4 69 53-132 7-79 (101)
99 2kbg_A N-CAM 2, neural cell ad 95.9 0.016 5.4E-07 46.6 6.7 73 62-144 19-102 (114)
100 3p4l_A Neogenin; iron homeosta 95.9 0.047 1.6E-06 48.2 10.5 83 50-143 4-102 (211)
101 2ic2_A CG9211-PA, GH03927P; IH 95.9 0.057 1.9E-06 43.2 10.0 73 59-132 11-90 (115)
102 2crz_A Fibronectin type-III do 95.9 0.022 7.4E-07 44.9 7.2 80 53-144 11-104 (110)
103 1uen_A KIAA0343 protein; immun 95.8 0.026 8.7E-07 45.4 7.7 88 51-144 15-119 (125)
104 2e3v_A Neural cell adhesion mo 95.8 0.06 2.1E-06 43.3 9.9 84 53-144 10-106 (122)
105 3mpc_A FN3-like protein; fibro 95.8 0.051 1.7E-06 42.6 9.1 68 52-132 6-76 (103)
106 2cum_A Tenascin-X; hexabrachio 95.8 0.098 3.4E-06 40.8 10.8 80 52-143 9-96 (105)
107 3qwq_B Adnectin; cell surface 95.7 0.048 1.6E-06 43.6 8.5 71 52-132 5-76 (114)
108 1qr4_A Protein (tenascin); fib 95.7 0.054 1.8E-06 46.7 9.5 83 51-144 95-185 (186)
109 1x5y_A Myosin binding protein 95.6 0.028 9.5E-07 44.3 6.9 71 52-132 10-85 (111)
110 2dn7_A Receptor-type tyrosine- 95.6 0.083 2.8E-06 40.9 9.7 68 53-132 10-81 (107)
111 2ocf_D Fibronectin; estrogen r 95.6 0.054 1.9E-06 43.7 8.7 72 51-132 29-101 (121)
112 2ee3_A Collagen alpha-1(XX) ch 95.6 0.042 1.5E-06 43.5 7.8 82 51-143 8-97 (108)
113 2cui_A Tenascin-X; fibronectin 95.5 0.032 1.1E-06 44.5 7.0 89 51-143 9-107 (112)
114 3t04_D Monobody 7C12; engineer 95.5 0.029 9.8E-07 43.8 6.4 71 52-132 9-83 (103)
115 2crm_A Fibronectin type-III do 95.4 0.026 8.8E-07 45.2 6.1 79 53-143 20-113 (120)
116 3f7q_A Integrin beta-4, GP150; 95.4 0.13 4.6E-06 46.1 11.4 82 51-143 6-96 (234)
117 3qht_C Monobody YSMB-1; fibron 95.3 0.033 1.1E-06 42.9 6.2 70 52-132 6-77 (97)
118 1ujt_A KIAA1568 protein; fibro 95.3 0.073 2.5E-06 43.0 8.5 79 56-143 18-113 (120)
119 2yux_A Myosin-binding protein 95.3 0.057 1.9E-06 43.2 7.9 70 52-132 19-93 (120)
120 2db8_A Tripartite motif protei 95.2 0.016 5.6E-07 45.8 4.1 70 63-144 23-104 (110)
121 1bpv_A Titin, A71, connectin; 95.2 0.028 9.6E-07 44.8 5.5 70 53-132 13-87 (112)
122 1qr4_A Protein (tenascin); fib 95.2 0.13 4.6E-06 44.1 10.4 87 52-150 8-103 (186)
123 1wis_A KIAA1514 protein; FNIII 95.1 0.074 2.5E-06 42.8 8.1 73 52-132 19-98 (124)
124 1tdq_A Tenascin-R; extracellul 95.1 0.36 1.2E-05 44.3 13.7 96 51-154 105-209 (283)
125 2yrz_A Integrin beta-4; GP150, 95.0 0.045 1.5E-06 43.5 6.2 71 52-132 19-92 (118)
126 1wfu_A Unnamed protein product 95.0 0.041 1.4E-06 44.5 6.0 31 114-144 76-114 (120)
127 1tdq_A Tenascin-R; extracellul 95.0 0.21 7.3E-06 45.9 11.8 94 52-155 16-118 (283)
128 2qbw_A PDZ-fibronectin fusion 95.0 0.056 1.9E-06 47.5 7.4 72 51-132 104-176 (195)
129 1v5j_A KIAA1355 protein, RSGI 94.9 0.13 4.5E-06 40.6 8.8 81 52-143 9-101 (108)
130 3r8q_A Fibronectin; heparin, F 94.9 0.25 8.6E-06 45.7 12.3 93 52-155 114-215 (290)
131 2ibg_A CG9211-PA, GH03927P; IH 94.9 0.094 3.2E-06 46.2 8.8 80 53-142 118-211 (214)
132 1uey_A KIAA0343 protein; immun 94.9 0.25 8.5E-06 39.6 10.6 83 51-143 17-113 (127)
133 3lpw_A A77-A78 domain from tit 94.8 0.18 6.1E-06 43.4 10.3 70 52-132 7-81 (197)
134 3r8q_A Fibronectin; heparin, F 94.6 0.31 1.1E-05 45.1 12.1 85 49-143 19-111 (290)
135 1wf5_A Sidekick 2 protein; FNI 94.6 0.095 3.2E-06 41.7 7.4 70 53-132 20-95 (121)
136 2gee_A Hypothetical protein; f 94.6 0.3 1E-05 42.7 11.3 70 53-132 25-96 (203)
137 1j8k_A Fibronectin; EDA, TYPEI 94.6 0.074 2.5E-06 40.3 6.3 70 53-132 4-74 (94)
138 2edb_A Netrin receptor DCC; tu 94.6 0.21 7.3E-06 39.6 9.3 68 52-132 19-90 (116)
139 3l5i_A Interleukin-6 receptor 94.5 0.13 4.3E-06 47.7 9.0 78 54-143 200-290 (290)
140 3n06_B PRL-R, prolactin recept 94.4 0.31 1.1E-05 42.8 11.0 82 51-144 103-205 (210)
141 2vkw_A Neural cell adhesion mo 94.4 0.17 5.9E-06 44.3 9.3 84 52-143 10-106 (209)
142 1uem_A KIAA1568 protein; immun 94.3 0.096 3.3E-06 41.3 6.7 71 52-132 17-91 (117)
143 2gee_A Hypothetical protein; f 94.2 0.26 8.8E-06 43.2 9.9 70 53-132 116-187 (203)
144 2b5i_B Interleukin-2 receptor 94.2 0.21 7.3E-06 44.6 9.4 84 52-144 107-208 (214)
145 3lpw_A A77-A78 domain from tit 94.1 0.21 7.1E-06 42.9 9.1 70 51-132 103-177 (197)
146 1cfb_A Drosophila neuroglian; 94.1 0.23 7.9E-06 43.3 9.5 73 51-132 105-183 (205)
147 2ha1_A Fibronectin; beta sandw 94.1 0.14 4.8E-06 44.7 8.0 69 53-132 2-75 (201)
148 1bqu_A Protein (GP130); cytoki 94.1 0.15 5E-06 45.0 8.1 85 51-143 104-205 (215)
149 3p4l_A Neogenin; iron homeosta 93.6 0.28 9.5E-06 43.0 9.0 84 50-143 105-204 (211)
150 2ibg_A CG9211-PA, GH03927P; IH 93.5 0.2 6.7E-06 44.0 7.9 80 53-132 4-89 (214)
151 1wfn_A Sidekick 2; FN3, cell a 93.5 0.14 4.9E-06 40.5 6.3 70 53-132 20-93 (119)
152 1uc6_A CNTF receptor, ciliary 93.3 0.37 1.3E-05 37.7 8.3 69 52-132 9-86 (109)
153 3fl7_A Ephrin receptor; ATP-bi 93.2 0.32 1.1E-05 49.9 9.8 81 52-144 442-534 (536)
154 2ekj_A Collagen alpha-1(XX) ch 93.2 0.051 1.7E-06 42.4 3.0 72 51-132 8-80 (105)
155 1cd9_B G-CSF-R, protein (G-CSF 93.1 0.34 1.1E-05 42.7 8.8 83 51-143 109-213 (215)
156 1i1r_A GP130, interleukin-6 re 93.0 0.32 1.1E-05 45.5 8.8 85 51-143 200-301 (303)
157 2vkw_A Neural cell adhesion mo 92.8 0.37 1.3E-05 42.1 8.4 71 51-132 110-184 (209)
158 1cfb_A Drosophila neuroglian; 92.7 0.49 1.7E-05 41.2 9.2 70 52-132 7-81 (205)
159 3t1w_A Four-domain fibronectin 92.7 0.37 1.3E-05 46.3 9.1 72 52-132 4-78 (375)
160 2w1n_A O-GLCNACASE NAGJ; hexos 92.5 0.98 3.3E-05 40.1 10.4 76 52-142 152-237 (238)
161 2h41_A Fibronectin; beta sandw 92.0 0.091 3.1E-06 40.5 3.0 60 63-132 18-78 (95)
162 1fnf_A Fibronectin; RGD, extra 92.0 0.52 1.8E-05 45.1 9.1 72 52-132 3-77 (368)
163 3csg_A MBP, maltose-binding pr 91.9 0.31 1.1E-05 48.8 7.6 71 51-132 370-443 (461)
164 1eer_B Epobp, erythropoietin r 91.8 1 3.5E-05 40.2 10.4 71 51-131 122-198 (227)
165 1fnf_A Fibronectin; RGD, extra 91.7 1.3 4.4E-05 42.2 11.6 94 52-155 187-289 (368)
166 1x5i_A Neogenin; RGM binding, 91.6 0.28 9.7E-06 39.5 5.7 68 52-132 29-100 (126)
167 3up1_A Interleukin-7 receptor 91.5 0.95 3.2E-05 40.7 9.5 83 51-144 113-215 (223)
168 3t1w_A Four-domain fibronectin 91.2 0.98 3.3E-05 43.3 10.1 82 53-144 189-279 (375)
169 2jll_A NCAM2, neural cell adhe 90.9 0.65 2.2E-05 44.6 8.6 79 56-144 298-387 (389)
170 2d9q_B Granulocyte colony-stim 90.9 0.88 3E-05 42.6 9.2 83 51-143 203-307 (313)
171 1wj3_A KIAA1496 protein; beta 90.8 0.63 2.2E-05 36.9 6.9 79 51-144 19-111 (117)
172 3mtr_A N-CAM-1, NCAM-1, neural 89.7 1.1 3.9E-05 38.9 8.5 84 53-144 116-212 (215)
173 3uto_A Twitchin; kinase, muscl 89.6 1.4 4.7E-05 45.6 10.1 68 53-132 12-84 (573)
174 3flo_A DNA polymerase alpha su 89.1 0.62 2.1E-05 46.4 6.6 74 146-219 146-247 (460)
175 1oww_A FN, fibronectin first t 89.0 2 6.7E-05 32.5 7.7 79 52-141 6-96 (98)
176 3f7q_A Integrin beta-4, GP150; 88.4 0.49 1.7E-05 42.3 5.0 76 52-132 100-179 (234)
177 2q7n_A Leukemia inhibitory fac 87.7 0.97 3.3E-05 45.7 7.2 87 51-144 387-487 (488)
178 3fl7_A Ephrin receptor; ATP-bi 87.6 2.7 9.2E-05 43.0 10.5 108 34-144 318-442 (536)
179 1axi_B HGHBP, growth hormone r 86.9 0.97 3.3E-05 40.8 6.1 80 51-142 131-234 (236)
180 2ha1_A Fibronectin; beta sandw 86.8 0.82 2.8E-05 39.6 5.4 66 57-132 118-184 (201)
181 1zlg_A Anosmin 1; insulin-like 86.2 3 0.0001 43.9 10.4 78 50-132 266-353 (680)
182 3v6o_A Leptin receptor; recept 86.1 1.8 6.2E-05 37.9 7.3 72 51-132 110-186 (206)
183 3tgx_A Interleukin-21 receptor 85.6 2.7 9.1E-05 37.3 8.2 85 51-144 101-209 (219)
184 2v5y_A Receptor-type tyrosine- 85.3 2.5 8.5E-05 44.8 9.3 88 50-143 359-459 (731)
185 3l5i_A Interleukin-6 receptor 85.3 4.2 0.00014 37.0 9.8 73 52-132 103-176 (290)
186 1bqu_A Protein (GP130); cytoki 85.0 1.8 6E-05 37.7 6.7 71 51-132 8-82 (215)
187 3lqm_A Interleukin-10 receptor 84.4 3.8 0.00013 35.7 8.6 77 54-144 96-196 (201)
188 1iar_B Protein (interleukin-4 84.4 3.8 0.00013 35.8 8.7 86 51-144 98-201 (207)
189 1n26_A IL-6 receptor alpha cha 84.1 3.3 0.00011 38.9 8.6 70 51-131 197-274 (325)
190 2jll_A NCAM2, neural cell adhe 83.8 12 0.00042 35.3 12.8 81 52-143 197-290 (389)
191 4doh_B Interleukin-20 receptor 83.5 2.3 8E-05 37.3 6.8 70 52-132 110-179 (206)
192 2b5i_C Cytokine receptor commo 83.3 4.4 0.00015 35.1 8.6 70 51-132 99-170 (199)
193 3bpo_C Interleukin-13 receptor 82.1 5.9 0.0002 36.9 9.5 81 51-132 200-286 (314)
194 3e0g_A Leukemia inhibitory fac 81.5 1 3.6E-05 45.4 4.1 86 51-143 382-481 (483)
195 1zlg_A Anosmin 1; insulin-like 81.3 3.4 0.00012 43.5 8.2 68 53-132 162-242 (680)
196 3l5h_A Interleukin-6 receptor 80.5 0.85 2.9E-05 46.8 3.1 85 51-143 199-300 (589)
197 2erj_C Cytokine receptor commo 80.4 7.3 0.00025 35.2 9.1 69 51-131 137-207 (247)
198 2gys_A Cytokine receptor commo 80.3 17 0.00058 35.3 12.5 84 51-144 109-216 (419)
199 1q38_A Fibronectin; amyloid fi 79.4 0.67 2.3E-05 33.9 1.3 28 114-141 39-73 (89)
200 4doh_R Interleukin-20 receptor 77.8 11 0.00037 33.4 9.2 77 54-144 111-214 (221)
201 2uvf_A Exopolygalacturonase; G 77.6 4.7 0.00016 41.9 7.6 33 112-144 112-153 (608)
202 3se4_A Interferon alpha/beta r 77.1 11 0.00036 36.8 9.8 64 54-132 108-182 (414)
203 2nzi_A Titin; IG-domain, FNIII 75.4 13 0.00044 33.7 9.5 69 52-132 200-273 (305)
204 3s98_A Interferon alpha/beta r 72.5 17 0.00059 33.7 9.6 61 56-131 106-177 (306)
205 1i1r_A GP130, interleukin-6 re 72.2 6.6 0.00022 36.2 6.6 72 50-132 103-178 (303)
206 3b4n_A Endo-pectate lyase; pec 69.1 12 0.0004 35.2 7.2 61 59-132 24-90 (344)
207 4go6_B HCF C-terminal chain 1; 61.8 26 0.00089 30.8 8.1 16 117-132 167-182 (232)
208 4go6_B HCF C-terminal chain 1; 61.0 7.5 0.00026 34.5 4.3 30 114-143 47-84 (232)
209 2v5y_A Receptor-type tyrosine- 58.7 44 0.0015 35.0 10.5 72 59-143 270-356 (731)
210 2dtg_E Insulin receptor; IR ec 57.7 3.3 0.00011 45.2 1.5 20 113-132 549-568 (897)
211 2dtg_E Insulin receptor; IR ec 55.7 1.2 4.2E-05 48.7 -2.4 89 51-144 793-889 (897)
212 2gys_A Cytokine receptor commo 54.3 10 0.00035 36.9 4.4 66 56-132 326-396 (419)
213 3l5h_A Interleukin-6 receptor 52.4 19 0.00066 36.4 6.2 70 55-132 405-475 (589)
214 1cd9_B G-CSF-R, protein (G-CSF 46.2 1.1E+02 0.0037 25.9 9.4 78 52-132 6-87 (215)
215 3se4_A Interferon alpha/beta r 37.5 66 0.0023 30.9 7.2 84 50-143 206-306 (414)
216 3n06_B PRL-R, prolactin recept 37.5 77 0.0026 26.8 7.0 74 52-132 5-81 (210)
217 3g9v_A Interleukin 22 receptor 34.5 12 0.00043 32.7 1.2 19 114-132 173-191 (211)
218 3w01_A Heptaprenylglyceryl pho 31.6 1.3E+02 0.0046 26.7 7.4 65 147-218 11-76 (235)
219 3s98_A Interferon alpha/beta r 31.5 1.2E+02 0.0042 27.6 7.7 90 50-142 202-301 (306)
220 2yyb_A Hypothetical protein TT 31.1 82 0.0028 28.1 6.1 41 295-339 60-100 (242)
221 3lqm_A Interleukin-10 receptor 27.1 2.4E+02 0.008 23.7 8.3 66 53-132 4-72 (201)
222 2fyw_A Conserved hypothetical 26.7 1.2E+02 0.004 27.5 6.4 43 295-339 62-104 (267)
223 3vzx_A Heptaprenylglyceryl pho 26.5 1.5E+02 0.0051 26.2 6.8 65 147-218 6-71 (228)
224 2d9q_B Granulocyte colony-stim 24.7 2.9E+02 0.0099 24.8 9.0 79 51-132 99-181 (313)
225 1nmo_A Hypothetical protein YB 23.1 1.6E+02 0.0055 26.2 6.5 42 295-339 59-100 (247)
226 2nyd_A UPF0135 protein SA1388; 22.0 1.3E+02 0.0043 28.9 5.8 42 295-339 64-105 (370)
227 3g9v_A Interleukin 22 receptor 20.8 2.6E+02 0.009 23.8 7.4 71 52-132 9-85 (211)
228 2f6u_A GGGPS, (S)-3-O-geranylg 20.2 2.3E+02 0.008 25.0 6.9 64 146-216 7-71 (234)
No 1
>1xzw_A Purple acid phosphatase; hydrolase; HET: NAG FUC MAN; 2.50A {Ipomoea batatas} SCOP: b.1.12.1 d.159.1.1
Probab=100.00 E-value=1.2e-67 Score=538.27 Aligned_cols=378 Identities=42% Similarity=0.723 Sum_probs=327.9
Q ss_pred CCCCCCeeEEEEecC--CCcEEEEEEeC-CCCCccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCE
Q 012895 49 RSESDPQQVHISLAA--KDYIRVSWITD-DKEAESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATT 125 (454)
Q Consensus 49 ~~~~~p~~v~l~~~~--~~~~~v~W~t~-~~~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~ 125 (454)
.+..+|+||||++++ .++|+|+|+|. +.++.+.|+|++.++.+...+.++.++|.+....++++|+|+|+||+|||+
T Consensus 20 ~~~~~p~~v~l~~~~~~~~~~~v~W~t~~~~~~~~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t~ 99 (426)
T 1xzw_A 20 SGYNAPQQVHITQGDYEGRGVIISWTTPYDKAGANKVFYWSENSKSQKRAMGTVVTYKYYNYTSAFIHHCTIKDLEYDTK 99 (426)
T ss_dssp CSTTCCEEEEEEECSSSSSCEEEEEEESSCCTTTTEEEEEETTCCCCEEEECEEECCEETTEECCEEEEEEECCCCTTCE
T ss_pred CCCCCCceEEEEECCCCCCeEEEEEEeCCCCCCCCEEEEecCCCCCceEEEEEEEEEEecCCcCCEEEEEEECCCCCCCE
Confidence 467899999999998 59999999999 877899999999988888888888777776556789999999999999999
Q ss_pred EEEEeCc--cCceeEEECCCC---CCCeEEEEEecCCCCCChHHHHHHhhcC--CCCeEeecCccccCCCC----hhhHH
Q 012895 126 YYYRCGG--RGPEFSFKMPPA---NFPIEFAIVGDLGQTEWTNSTLDHVGSK--DYDVFLLPGDLSYADFQ----QPLWD 194 (454)
Q Consensus 126 Y~Yrv~~--~s~~~~F~T~p~---~~~~~f~~igD~~~~~~~~~~l~~i~~~--~pd~vl~~GDl~y~~~~----~~~~~ 194 (454)
|+|||+. .++.++|+|+|. ..++||+++||+|.......+++++.+. +|||||++||++|.++. ..+|+
T Consensus 100 Y~Yrv~~g~~s~~~~f~T~p~~~~~~~~~f~~~gD~~~~~~~~~~l~~i~~~~~~~D~vl~~GD~~y~~~~~~~~~~~~~ 179 (426)
T 1xzw_A 100 YYYRLGFGDAKRQFWFVTPPKPGPDVPYVFGLIGDIGQTHDSNTTLTHYEQNSAKGQAVLFMGDLSYSNRWPNHDNNRWD 179 (426)
T ss_dssp EEEEECCGGGCEEEEEECCCCCCTTCCEEEEEECSCTTBHHHHHHHHHHHHCTTCCSEEEECSCCCCGGGSGGGCTHHHH
T ss_pred EEEEECCCCccceeEEECCCCCCCCCCeEEEEEEeCCCCCchHHHHHHHHhCCCCCCEEEeCCChhhcccCCcccchHHH
Confidence 9999985 578999999985 5789999999999875556788888755 99999999999997654 46799
Q ss_pred HHhhhhhhhhcCCCeeecCCCcccCCCCCC-CcchhhhhhhhccCCCCCCCCCCCceEEEEeCeEEEEEecccCCCCCCH
Q 012895 195 SFGRLVEPYASSRPWMVTEGNHEIESIPII-LPHAFKAYNARWLMPYEESGSSSNLYYSFDIAGAHIIMLGSYTDFDEDS 273 (454)
Q Consensus 195 ~~~~~~~~l~~~~P~~~v~GNHD~~~~~~~-~~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~Lds~~~~~~~~ 273 (454)
.|.+.++++.+.+|+++++||||+...+.. ....+..|.++|.||.+..+...+.||+|++|+++||+||++..+..+.
T Consensus 180 ~~~~~l~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~f~~p~~~~~~~~~~~ys~~~g~~~~i~Ldt~~~~~~~~ 259 (426)
T 1xzw_A 180 TWGRFSERSVAYQPWIWTAGNHEIDYAPDIGEYQPFVPFTNRYPTPHEASGSGDPLWYAIKRASAHIIVLSSYSGFVKYS 259 (426)
T ss_dssp HHHHHHHHHHTTSCEECCCCGGGCCCBGGGTBCSTTHHHHHHSCCCCGGGTCSSTTSEEEEETTEEEEECCTTSCCSTTS
T ss_pred HHHHHHHHHHhcCCEEEeccccccccCCccccccCChhheEEEeCCcccCCCCCCCeEEEEECCEEEEEeeCcccCCCCH
Confidence 999999998888999999999999754311 1235677888999997654445678999999999999999988777789
Q ss_pred HHHHHHHHHHHhhccCCCCeEEEEEccccccCCCCCCCCcHHHHHHHHHHHHhcCCcEEEecccccceeeecccCCC---
Q 012895 274 AQYKWLKADLAKINRKKTPWIFVLLHAPWYNTNTAHQGEGESMRNSMEELLYNARVDVVFAGHVHAYERFTRIYDNK--- 350 (454)
Q Consensus 274 ~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~y~r~~~~~~~~--- 350 (454)
+|++||+++|+++++++++|+||++|+|+++....+..++..+++.|+++|.+++|+++|+||+|.|+|..|+++++
T Consensus 260 ~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~~~r~~p~~~~~~~~ 339 (426)
T 1xzw_A 260 PQYKWFTSELEKVNRSETPWLIVLVHAPLYNSYEAHYMEGEAMRAIFEPYFVYYKVDIVFSGHVHSYERSERVSNVAYNI 339 (426)
T ss_dssp HHHHHHHHHHHHCCTTTCCEEEEECSSCSSCCBSTTTTTTHHHHHHHHHHHHHTTCSEEEECSSSSEEEECSEECCCCCS
T ss_pred HHHHHHHHHHHhhhhcCCCEEEEEeccCceeCCCcccCCCHHHHHHHHHHHHHhCCCEEEEcChhhheeeeeecCccccc
Confidence 99999999999987657889999999999987655555666789999999999999999999999999999987765
Q ss_pred --------cCCCCcEEEEECCCCCCCCcccccCCCCCCCceeeecccCEEEEEEecCCeEEEEEEEecCCCceeeeEEEE
Q 012895 351 --------ADPCGPIYITIGDGGNREGLALEFKEPKSPLSMFQESSFGHARLKILDETRAHWSWYRNNDSDAVIADEVRL 422 (454)
Q Consensus 351 --------~~~~g~~yi~~G~gG~~~~~~~~~~~~~p~~~~~~~~~~G~~~l~v~~~~~~~~~~~~~~dg~~~~~D~~~i 422 (454)
.+++|++||++|+||+.+++...+..++|+|++|+...+||++|+|.|++++.|+|++++||+.++.|+|||
T Consensus 340 ~~g~~~~~~~~~g~~yi~~G~gG~~~~~~~~~~~~~p~~s~~~~~~~G~~~l~v~n~t~~~~~~~~~~dg~~~~~D~~~i 419 (426)
T 1xzw_A 340 VNAKCTPVSDESAPVYITIGDGGNSEGLASEMTQPQPSYSAFREASFGHGIFDIKNRTHAHFSWHRNQDGASVEADSLWL 419 (426)
T ss_dssp TTCCCCCEECTTSCEEEEECCSCCTTCCCCCBCSSCCTTEEEEECCCEEEEEEECSSSEEEEEEEETTSCTTCCSEEEEE
T ss_pred cCCccccccCCCccEEEEeCCCccccccccccCCCCCCceeEEecCCCeEEEEEEcCCeEEEEEEECCCCCEEEeEEEEE
Confidence 346899999999999988765567778899999999999999999999999999999999999889999999
Q ss_pred EEcC
Q 012895 423 ESLS 426 (454)
Q Consensus 423 ~~~~ 426 (454)
.|+.
T Consensus 420 ~~~~ 423 (426)
T 1xzw_A 420 LNRY 423 (426)
T ss_dssp ECSC
T ss_pred Eecc
Confidence 9974
No 2
>2qfp_A Purple acid phosphatase; binuclear, Fe-Zn, hydrolase; HET: NAG NDG; 2.20A {Phaseolus vulgaris} SCOP: b.1.12.1 d.159.1.1 PDB: 2qfr_A* 1kbp_A* 3kbp_A* 4kbp_A*
Probab=100.00 E-value=1.6e-66 Score=529.63 Aligned_cols=384 Identities=42% Similarity=0.704 Sum_probs=326.0
Q ss_pred CCCCCCeeEEEEecC--CCcEEEEEEeCCCCCccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEE
Q 012895 49 RSESDPQQVHISLAA--KDYIRVSWITDDKEAESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTY 126 (454)
Q Consensus 49 ~~~~~p~~v~l~~~~--~~~~~v~W~t~~~~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y 126 (454)
.+...|+||||++++ .++|+|+|.|.+.++.+.|+|++.++.+..++.|+.++|.+....++++|+|.|+||+|||+|
T Consensus 14 ~~~~~P~~v~l~~~~~~~~~~~v~W~t~~~~~~~~V~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y 93 (424)
T 2qfp_A 14 PGYNAPQQVHITQGDLVGRAMIISWVTMDEPGSSAVRYWSEKNGRKRIAKGKMSTYRFFNYSSGFIHHTTIRKLKYNTKY 93 (424)
T ss_dssp CSTTCCEEEEEEECSSSSSCEEEEEEESSSCCCCCEEEEESSSCCCEEECCEEECCBCSSCBCCEEEEEEECSCCTTCEE
T ss_pred CCCCCCceEEEEecCCCCCeEEEEEECCCCCCCCEEEEEeCCCCCceEEEEEEEEEEecCCCCCEEEEEEECCCCCCCEE
Confidence 356789999999998 589999999987778899999999888888888887777765567899999999999999999
Q ss_pred EEEeCc--cCceeEEECCCC---CCCeEEEEEecCCCCCChHHHHHHhhcC--CCCeEeecCccccCCCC----hhhHHH
Q 012895 127 YYRCGG--RGPEFSFKMPPA---NFPIEFAIVGDLGQTEWTNSTLDHVGSK--DYDVFLLPGDLSYADFQ----QPLWDS 195 (454)
Q Consensus 127 ~Yrv~~--~s~~~~F~T~p~---~~~~~f~~igD~~~~~~~~~~l~~i~~~--~pd~vl~~GDl~y~~~~----~~~~~~ 195 (454)
+|||+. .++.++|+|+|. ..++||+++||+|.......+++.+.+. +|||||++||++|.++. ...|+.
T Consensus 94 ~Yrv~~~~~s~~~~f~T~p~~~~~~~~~f~~igD~~~~~~~~~~l~~~~~~~~~~D~vl~~GDl~y~~~~~~~~~~~~~~ 173 (424)
T 2qfp_A 94 YYEVGLRNTTRRFSFITPPQTGLDVPYTFGLIGDLGQSFDSNTTLSHYELSPKKGQTVLFVGDLSYADRYPNHDNVRWDT 173 (424)
T ss_dssp EEEECCSSSCEEEEEECCCCCCTTCCEEEEEECSCTTBHHHHHHHHHHHTCSSCCCEEEECSCCSCGGGSGGGCTHHHHH
T ss_pred EEEECCCCccceEEEECCCCCCCCCCeEEEEEEeCCCCCChHHHHHHHHhCCCCCCEEEEcCccccccccccccchHHHH
Confidence 999986 478899999985 4689999999999875555677877654 99999999999997653 357888
Q ss_pred HhhhhhhhhcCCCeeecCCCcccCCCCCC-CcchhhhhhhhccCCCCCCCCCCCceEEEEeCeEEEEEecccCCCCCCHH
Q 012895 196 FGRLVEPYASSRPWMVTEGNHEIESIPII-LPHAFKAYNARWLMPYEESGSSSNLYYSFDIAGAHIIMLGSYTDFDEDSA 274 (454)
Q Consensus 196 ~~~~~~~l~~~~P~~~v~GNHD~~~~~~~-~~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~Lds~~~~~~~~~ 274 (454)
|.++++++.+.+|+++++||||+...+.. ....+..|.++|.+|........+.||+|++|+++||+||++..+..+.+
T Consensus 174 ~~~~l~~~~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~~ys~~~g~~~~i~Ldt~~~~~~~~~ 253 (424)
T 2qfp_A 174 WGRFTERSVAYQPWIWTAGNHEIEFAPEINETEPFKPFSYRYHVPYEASQSTSPFWYSIKRASAHIIVLSSYSAYGRGTP 253 (424)
T ss_dssp HHHHHHHHHTTSCEEECCCHHHHCCBGGGTBCSTTHHHHHHCCCCGGGGTCSSTTSEEEEETTEEEEECCTTSCCSTTSH
T ss_pred HHHHHHHHHhcCCeEeecCCcccccCCcccccccchhhhhhccCCccccCCCCCcEEEEEECCEEEEEecCCccCCCcHH
Confidence 88889988888999999999999643221 11256778889999875444456789999999999999999877766789
Q ss_pred HHHHHHHHHHhhccCCCCeEEEEEccccccCCCCCCCCcHHHHHHHHHHHHhcCCcEEEecccccceeeecccCCC----
Q 012895 275 QYKWLKADLAKINRKKTPWIFVLLHAPWYNTNTAHQGEGESMRNSMEELLYNARVDVVFAGHVHAYERFTRIYDNK---- 350 (454)
Q Consensus 275 Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~y~r~~~~~~~~---- 350 (454)
|++||+++|++.++++++|+||++|+|+++....+..++..+++.|+++|.+++|+++|+||+|.|+|..++++..
T Consensus 254 Q~~WL~~~L~~~~~~~~~~~Iv~~H~P~~~~~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~y~r~~~~~~~~~~~~ 333 (424)
T 2qfp_A 254 QYTWLKKELRKVKRSETPWLIVLMHSPLYNSYNHHFMEGEAMRTKFEAWFVKYKVDVVFAGHVHAYERSERVSNIAYKIT 333 (424)
T ss_dssp HHHHHHHHHHHCCTTTCCEEEEECSSCSSCCBSTTTTTTHHHHHHHHHHHHHTTCSEEEECSSSSEEEECSEECCCCCSS
T ss_pred HHHHHHHHHhhhcccCCCEEEEEeCcCceecCcccccccHHHHHHHHHHHHHhCCcEEEECChhhhheeccccCcceecc
Confidence 9999999999987656789999999999987554444556788999999999999999999999999999876532
Q ss_pred -------cCCCCcEEEEECCCCCCCCcccccCCCCCCCceeeecccCEEEEEEecCCeEEEEEEEecCCCceeeeEEEEE
Q 012895 351 -------ADPCGPIYITIGDGGNREGLALEFKEPKSPLSMFQESSFGHARLKILDETRAHWSWYRNNDSDAVIADEVRLE 423 (454)
Q Consensus 351 -------~~~~g~~yi~~G~gG~~~~~~~~~~~~~p~~~~~~~~~~G~~~l~v~~~~~~~~~~~~~~dg~~~~~D~~~i~ 423 (454)
.++++++||++|+||+.+++...+..++|+|++|++..|||++|++.|.+++.|+|++++||+.++.|+|||.
T Consensus 334 ~g~~~~~~~~~~~vyi~~G~gg~~~~~~~~~~~~~p~~s~~~~~~~G~~~l~v~n~t~~~~~~~~~~~g~~~~~D~~~i~ 413 (424)
T 2qfp_A 334 NGLCTPVKDQSAPVYITIGDAGNYGVIDSNMIQPQPEYSAFREASFGHGMFDIKNRTHAHFSWNRNQDGVAVEADSVWFF 413 (424)
T ss_dssp SCCCSCEECTTSCEEEEECCSCTTSCCCCCBCSSCCTTEEEEECCCEEEEEEECSSSEEEEEEEETTSCTTCCSEEEEEE
T ss_pred CCccccccCCCCcEEEEecCCCCccccCccCCCCCCCcceEEecCCCEEEEEEEcCcEEEEEEEECCCCCEEeeeEEEEE
Confidence 2467999999999999987755677788999999999999999999999999999999999997778999999
Q ss_pred EcCCCCCCC
Q 012895 424 SLSTSKQCW 432 (454)
Q Consensus 424 ~~~~~~~~~ 432 (454)
|+...+.|.
T Consensus 414 ~~~~~~~~~ 422 (424)
T 2qfp_A 414 NRHWYPVDD 422 (424)
T ss_dssp CTTTCCCCC
T ss_pred ecccccccc
Confidence 997766664
No 3
>2yeq_A Apased, PHOD, alkaline phosphatase D; hydrolase, phosphodiesterase; HET: PE5; 1.93A {Bacillus subtilis}
Probab=100.00 E-value=1.5e-38 Score=329.64 Aligned_cols=348 Identities=20% Similarity=0.216 Sum_probs=236.3
Q ss_pred CeeEEEEecC-CCcEEEEEEeCCC-----------CCccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCC
Q 012895 54 PQQVHISLAA-KDYIRVSWITDDK-----------EAESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLE 121 (454)
Q Consensus 54 p~~v~l~~~~-~~~~~v~W~t~~~-----------~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~ 121 (454)
|....|++|+ .....|.|.+... +....+++.+++.+.+..+.|...+.. ..+++|+|.|+||+
T Consensus 8 ~f~~GvasGDp~~~~vilWtr~~p~~~~~~~~~~~~~~v~~eva~d~~f~~~v~~g~~~a~~----~~~~t~~v~v~gL~ 83 (527)
T 2yeq_A 8 PFTLGVASGDPLSDSVVLWTRLAPDPLNGGGMPKQAVPVKWEVAKDEHFRKIVRKGTEMAKP----SLAHSVHVEADGLE 83 (527)
T ss_dssp SCTTCEEEECCCSSCEEEEEECCSBGGGTBCCCSSCEEEEEEEESSTTSSSEEEEEEEEECG----GGTTEEEEEECSCC
T ss_pred CccccccccCCCCCeEEEEEecCCcccCCCCCCCCceEEEEEEecCCccccceEeeeEEecC----CCceEEEeecCCcC
Confidence 3334499999 4444588999842 123344555556666677777655443 67899999999999
Q ss_pred CCCEEEEEeCc---cCceeEEECCCC----CCCeEEEEEecCCCCCChHHHHHHhhcCCCCeEeecCccccCCCChh---
Q 012895 122 PATTYYYRCGG---RGPEFSFKMPPA----NFPIEFAIVGDLGQTEWTNSTLDHVGSKDYDVFLLPGDLSYADFQQP--- 191 (454)
Q Consensus 122 p~t~Y~Yrv~~---~s~~~~F~T~p~----~~~~~f~~igD~~~~~~~~~~l~~i~~~~pd~vl~~GDl~y~~~~~~--- 191 (454)
|||+|+|||.. .+.+++|+|+|. ..++||+++||.+.......++++|.+.+||||||+||++|++....
T Consensus 84 P~t~Y~Yr~~~~~~~S~~g~frT~P~~~~~~~~~rfa~~sc~~~~~g~~~~~~~ia~~~~D~vlhlGD~iY~d~~~~~~~ 163 (527)
T 2yeq_A 84 PNKVYYYRFKTGHELSPVGKTKTLPAPGANVPQMTFAFASCQQYEHGYYTAYKHMAKEKLDLVFHLGDYIYEYGPNEYVS 163 (527)
T ss_dssp TTCEEEEEEEETTEECCCEEEECCCCTTCCCCCEEEEEECCCCGGGCCCHHHHHHTTSCCSEEEECSCSSCCCCTTSSCC
T ss_pred CCCEEEEEEEeCCCcCCCceEEcCCCCCCCCCCeEEEEEecCCCCCCccHHHHHHHhcCCCEEEecCCcccCCCCCcccc
Confidence 99999999975 478899999987 26899999999986544457888888889999999999999875421
Q ss_pred ---------------------hHHHHh--hhhhhhhcCCCeeecCCCcccCCCCCCC--c-----chh-----hhhhhhc
Q 012895 192 ---------------------LWDSFG--RLVEPYASSRPWMVTEGNHEIESIPIIL--P-----HAF-----KAYNARW 236 (454)
Q Consensus 192 ---------------------~~~~~~--~~~~~l~~~~P~~~v~GNHD~~~~~~~~--~-----~~~-----~~~~~~~ 236 (454)
.|..+. ..++.+.+.+|+++++||||+.++.... . ..| .+++.+|
T Consensus 164 ~~~~~R~~~~~e~~tl~~yr~~y~~~~~dp~lq~~~a~~P~i~~wDDHE~~nn~~~~~~~~~~~~~~f~~rr~~A~~ay~ 243 (527)
T 2yeq_A 164 KTGNVRTHNSAEIITLQDYRNRHAQYRSDANLKAAHAAFPWVVTWDDHEVENNYANKIPEKGQSVEAFVLRRAAAYQAYY 243 (527)
T ss_dssp TTCCCSCCSSSSCCSHHHHHHHHHHHHTCHHHHHHHHHSEEEECCCSTTTSTTCBTTBCSTTCCHHHHHHHHHHHHHHHH
T ss_pred cccccccCCcccccCHHHHHHHHHHHhCCHHHHHHHhcCCEEEecccccccCCCCCCcccccCCcccHHHHHHHHHHHHH
Confidence 111111 2356667789999999999997652210 0 001 1233333
Q ss_pred -cCCCCC----CCCCCCceEEEEeCe-EEEEEecccCCC----------------------CCCHHHHHHHHHHHHhhcc
Q 012895 237 -LMPYEE----SGSSSNLYYSFDIAG-AHIIMLGSYTDF----------------------DEDSAQYKWLKADLAKINR 288 (454)
Q Consensus 237 -~~p~~~----~~~~~~~~ys~~~g~-v~fi~Lds~~~~----------------------~~~~~Q~~WL~~~L~~~~~ 288 (454)
.||... .+.....||+|++|+ ++||+||++... ..+.+|++||+++|+++
T Consensus 244 e~~P~~~~~~p~~~~~~~y~sf~~G~lv~~i~LDtR~yr~~~~~~~~~~~~~~~~~~~~~~~lG~~Q~~WL~~~L~~s-- 321 (527)
T 2yeq_A 244 EHMPLRISSLPNGPDMQLYRHFTYGNLASFNVLDTRQYRDDQANNDGNKPPSDESRNPNRTLLGKEQEQWLFNNLGSS-- 321 (527)
T ss_dssp HHSCCCGGGCCBTTBCCCCEEEEETTTEEEEECCSSSSCCCCGGGSSEECCCHHHHCTTCCSSCHHHHHHHHHHHHHC--
T ss_pred HhCCCCcccCCCCCCceEEEEEEcCCcceEEEEeccccccccccccccccccccccCCcccccCHHHHHHHHHHHhcC--
Confidence 244321 122347899999999 999999995421 14689999999999986
Q ss_pred CCCCeEEEEEccccccCCCCC--------CC--CcHHHHHHHHHHHHhcCCc--EEEecccccceeeecccCCCcCCC--
Q 012895 289 KKTPWIFVLLHAPWYNTNTAH--------QG--EGESMRNSMEELLYNARVD--VVFAGHVHAYERFTRIYDNKADPC-- 354 (454)
Q Consensus 289 ~~~~w~Iv~~H~P~~~~~~~~--------~~--~~~~~~~~l~~ll~~~~v~--lvl~GH~H~y~r~~~~~~~~~~~~-- 354 (454)
+++|+||+.|+|++...... .. .....|++|.++|.+++|+ ++|+||+|.+++...... ..++.
T Consensus 322 -~a~W~Iv~s~~p~~~~~~~~g~~~~~~~D~W~g~~~~R~~Ll~~l~~~~v~n~vvLsGDvH~~~~~~~~~~-~~~p~~~ 399 (527)
T 2yeq_A 322 -TAHWNVLAQQIFFAKWNFGTSASPIYSMDSWDGYPAQRERVINFIKSKNLNNVVVLTGDVHASWASNLHVD-FEKTSSK 399 (527)
T ss_dssp -CSSEEEEECSSCCSCCCSSCSSSCCEETTSGGGSHHHHHHHHHHHHHTTCCCEEEEECSSSSEEEEEEESS-TTCTTSC
T ss_pred -CCCeEEEEeCCcccccccCCCcccccCccchhccHHHHHHHHHHHHHhCCCCEEEEEcchHHHhHhhcccc-ccCCCCC
Confidence 67899999999998754211 00 1135799999999999984 999999999998753221 11222
Q ss_pred --CcEEEEECC--CCCCCCcc---cccCCCCCCCceeeecccCEEEEEEecCCeEEEEEEEecC
Q 012895 355 --GPIYITIGD--GGNREGLA---LEFKEPKSPLSMFQESSFGHARLKILDETRAHWSWYRNND 411 (454)
Q Consensus 355 --g~~yi~~G~--gG~~~~~~---~~~~~~~p~~~~~~~~~~G~~~l~v~~~~~~~~~~~~~~d 411 (454)
++-+++++. ||....+. ..+...+|+ ..|.+...||..|+| +.+.++.+|+..++
T Consensus 400 ~~~~ef~~ssi~s~~~g~~~~~~~~~~~~~np~-~~~~~~~~Gy~~v~v-t~~~~~~~~~~v~~ 461 (527)
T 2yeq_A 400 IFGAEFVGTSITSGGNGADKRADTDQILKENPH-IQFFNDYRGYVRCTV-TPHQWKADYRVMPF 461 (527)
T ss_dssp EEEEEEECCCSSTTCSCBSBCTTHHHHHHHCTT-EEEEEBCEEEEEEEE-ETTEEEEEEEEESC
T ss_pred ceEEEEEcCCeeCCCCcccchhhhhhhhhcCCc-ceeeeCCCCEEEEEE-eccEEEEEEEEeCC
Confidence 344443322 11110000 011123455 345557889999998 55799999987765
No 4
>3tgh_A Glideosome-associated protein 50; phosphatase fold, NOT A phosphatase, motor protein, structur protein, membrane protein; 1.70A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=4.7e-35 Score=286.81 Aligned_cols=251 Identities=16% Similarity=0.258 Sum_probs=184.4
Q ss_pred CCeEEEEEecCCCCCChHHH-----HHHhhcCCCCeEeecCccccCCCC---hhhHHH-Hhhhhhhh--hcCCCeeecCC
Q 012895 146 FPIEFAIVGDLGQTEWTNST-----LDHVGSKDYDVFLLPGDLSYADFQ---QPLWDS-FGRLVEPY--ASSRPWMVTEG 214 (454)
Q Consensus 146 ~~~~f~~igD~~~~~~~~~~-----l~~i~~~~pd~vl~~GDl~y~~~~---~~~~~~-~~~~~~~l--~~~~P~~~v~G 214 (454)
..+||+++||+|.+...+.. .+.+++.+|||||++||++|.+.. ..+|.. |.+..+.+ ...+||++++|
T Consensus 2 ~~l~f~~igD~g~g~~~q~~va~~m~~~~~~~~pd~vl~~GD~~y~G~~~~~d~~~~~~f~~~~~~~~~~~~~P~~~vlG 81 (342)
T 3tgh_A 2 CQLRFASLGDWGKDTKGQILNAKYFKQFIKNERVTFIVSPGSNFIDGVKGLNDPAWKNLYEDVYSEEKGDMYMPFFTVLG 81 (342)
T ss_dssp CCEEEEECCSCBSCCHHHHHHHHHHHHHHHHTTCCEEEECSCSBTTCCCSTTCTHHHHHTTTTSCCGGGTTCSEEEECCC
T ss_pred ceEEEEEEecCCCCCchHHHHHHHHHHHHhhcCCCEEEECCCcccCCCCcCccHHHHHHHHHHhhhhhhhhCCCEEEeCC
Confidence 57999999999976544322 223346899999999999998432 345644 33333333 23599999999
Q ss_pred CcccCCCCCCCcchh-------------------hhhhhhccCCCCCCCCCCCceEEE----Ee---------C----eE
Q 012895 215 NHEIESIPIILPHAF-------------------KAYNARWLMPYEESGSSSNLYYSF----DI---------A----GA 258 (454)
Q Consensus 215 NHD~~~~~~~~~~~~-------------------~~~~~~~~~p~~~~~~~~~~~ys~----~~---------g----~v 258 (454)
|||+..+..... .+ .....+|.||. .||++ .. | .+
T Consensus 82 NHD~~~~~~aq~-~~~~~~~~~~~~~~~~~~~~~~~~~~rw~~P~--------~yY~~~~~f~~~~~~~~~~~g~~~~~v 152 (342)
T 3tgh_A 82 TRDWTGNYNAQL-LKGQGIYIEKNGETSIEKDADATNYPKWIMPN--------YWYHYFTHFTVSSGPSIVKTGHKDLAA 152 (342)
T ss_dssp HHHHTSCHHHHH-HHHHC---------------CCCSSCEEECSS--------SSEEEEEEEEEC---------CEEEEE
T ss_pred CCccCCCchHhh-hhhhcccccccccccccccccccCCCCccCCc--------ceEEEEEEeeccccccccccCCCCceE
Confidence 999976532110 11 11335677774 57764 32 3 39
Q ss_pred EEEEecccCCCC----------CCHHHHHHHHHHHHhhccCCCCeEEEEEccccccCCCCCCCCcHHHHHHHHHHHHhcC
Q 012895 259 HIIMLGSYTDFD----------EDSAQYKWLKADLAKINRKKTPWIFVLLHAPWYNTNTAHQGEGESMRNSMEELLYNAR 328 (454)
Q Consensus 259 ~fi~Lds~~~~~----------~~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~ 328 (454)
+||+|||..... ...+|++||+++|+ +++|+||++|||+|+.... +....+++.|+++|.+++
T Consensus 153 ~fi~LDT~~l~~~~~~~~~~~~~~~~Ql~WLe~~L~-----~~~~~IV~~HhP~~~~~~~--~~~~~l~~~l~~ll~~~~ 225 (342)
T 3tgh_A 153 AFIFIDTWVLSSNFPYKKIHEKAWNDLKSQLSVAKK-----IADFIIVVGDQPIYSSGYS--RGSSYLAYYLLPLLKDAE 225 (342)
T ss_dssp EEEECCTTTTSTTCSCHHHHHHHHHHHHHHHHHHHH-----HCSEEEEECSSCSSCSSTT--CCCHHHHHHTHHHHHHTT
T ss_pred EEEEEeCcccccCCcccccchHHHHHHHHHHHHhhc-----cCCcEEEEECCCCCCCCCC--CCcHHHHHHHHHHHHHcC
Confidence 999999964221 12589999999994 2479999999999987642 334567899999999999
Q ss_pred CcEEEecccccceeeecccCCCcCCCCcEEEEECCCCCCCCcccccCCCCCCCceeeecccCEEEEEEecCCeEEEEEEE
Q 012895 329 VDVVFAGHVHAYERFTRIYDNKADPCGPIYITIGDGGNREGLALEFKEPKSPLSMFQESSFGHARLKILDETRAHWSWYR 408 (454)
Q Consensus 329 v~lvl~GH~H~y~r~~~~~~~~~~~~g~~yi~~G~gG~~~~~~~~~~~~~p~~~~~~~~~~G~~~l~v~~~~~~~~~~~~ 408 (454)
|+++|+||+|.|++..+ .|+.||++|+||...+. .. ..++|+.|+...+||..+++ +.+.+.++|+.
T Consensus 226 VdlvlsGH~H~~~~~~~--------~g~~~iv~Ga~g~~~~~--~~--~~~~~s~f~~~~~Gf~~l~v-~~~~l~~~~~~ 292 (342)
T 3tgh_A 226 VDLYISGHDNNMEVIED--------NDMAHITCGSGSMSQGK--SG--MKNSKSLFFSSDIGFCVHEL-SNNGIVTKFVS 292 (342)
T ss_dssp CCEEEECSSSSEEEEEE--------TTEEEEEECCSSCCCCC--CS--SCCTTEEEEECSSEEEEEEE-ETTEEEEEEEE
T ss_pred CCEEEECCCcceeEEee--------CCcEEEEeCcccccccc--CC--CCCCcceeecCCCcEEEEEE-ECCEEEEEEEE
Confidence 99999999999999874 47999999998875421 11 23567899989999999998 45799999998
Q ss_pred ecCCCceeeeEEEEEEcCC
Q 012895 409 NNDSDAVIADEVRLESLST 427 (454)
Q Consensus 409 ~~dg~~~~~D~~~i~~~~~ 427 (454)
+.+|+ ++|+|+|.|+..
T Consensus 293 ~~~G~--vld~~~i~k~~~ 309 (342)
T 3tgh_A 293 SKKGE--VIYTHKLNIKKK 309 (342)
T ss_dssp TTTTE--EEEEEEEECCCC
T ss_pred CCCCc--EEEEEEEECCCC
Confidence 67887 999999999854
No 5
>1ute_A Protein (II purple acid phosphatase); tartrate resistant acid phosphatase metalloenzyme, uteroferrin, hydrolase; HET: NAG; 1.55A {Sus scrofa} SCOP: d.159.1.1 PDB: 1war_A* 2bq8_X 1qfc_A* 1qhw_A*
Probab=99.98 E-value=2e-31 Score=258.97 Aligned_cols=261 Identities=20% Similarity=0.291 Sum_probs=175.3
Q ss_pred CCCCCCCeEEEEEecCCCCCCh----------HHHHHH-hhcCCCCeEeecCccccCCCCh----hhHHHH-hhhhhhhh
Q 012895 141 MPPANFPIEFAIVGDLGQTEWT----------NSTLDH-VGSKDYDVFLLPGDLSYADFQQ----PLWDSF-GRLVEPYA 204 (454)
Q Consensus 141 T~p~~~~~~f~~igD~~~~~~~----------~~~l~~-i~~~~pd~vl~~GDl~y~~~~~----~~~~~~-~~~~~~l~ 204 (454)
|+| ..++||+++||+|..... .+.+.. ++..+|||||++||++|..+.. .+|... .+.+....
T Consensus 1 t~~-~~~~~~~~isD~h~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~vv~~GD~~~~~g~~~~~~~~~~~~~~~~~~~~~ 79 (313)
T 1ute_A 1 TAP-TPILRFVAVGDWGGVPNAPFHTAREMANAKAIATTVKTLGADFILSLGDNFYFTGVHDAKDKRFQETFEDVFSDPS 79 (313)
T ss_dssp --C-CCCEEEEEECSCCCCSSTTSSCHHHHHHHHHHHHHHHHHCCSEEEECSCCSTTTCCSSTTCTHHHHHTTTTSCSGG
T ss_pred CCC-CCceEEEEEcccCCCCCccccCchHHHHHHHHHHHHHhcCCCEEEECCCccCcCCCCCcchHHHHHHHHHHcCchh
Confidence 445 578999999999986421 122333 3467999999999999865432 233222 22222111
Q ss_pred c-CCCeeecCCCcccCCCCCCCcchhhhhhhhccCCCCCCCCCCCceEEEEe------CeEEEEEecccCC---------
Q 012895 205 S-SRPWMVTEGNHEIESIPIILPHAFKAYNARWLMPYEESGSSSNLYYSFDI------AGAHIIMLGSYTD--------- 268 (454)
Q Consensus 205 ~-~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~------g~v~fi~Lds~~~--------- 268 (454)
. .+|+++++||||+..+... ...+.....+|.+| ..||++.+ ++++||+||+...
T Consensus 80 l~~~p~~~v~GNHD~~~~~~~-~~~~~~~~~~~~~~--------~~~y~~~~~~~~~~~~~~~i~lds~~~~~~~~~~~~ 150 (313)
T 1ute_A 80 LRNVPWHVLAGNHDHLGNVSA-QIAYSKISKRWNFP--------SPYYRLRFKIPRSNVSVAIFMLDTVTLCGNSDDFVS 150 (313)
T ss_dssp GTTCCEEECCCHHHHHSCHHH-HHHGGGTSTTEECC--------SSSEEEEEECTTSSCEEEEEECCHHHHHCCGGGSTT
T ss_pred hcCCCEEEECCCCccCCCccc-cccccccCCCccCc--------ccceEEEEecCCCCceEEEEEEEChHHhCcCccccc
Confidence 2 5899999999998532110 00111122344444 46888887 4899999998531
Q ss_pred --------CCCCHHHHHHHHHHHHhhccCCCCeEEEEEccccccCCCCCCCCcHHHHHHHHHHHHhcCCcEEEecccccc
Q 012895 269 --------FDEDSAQYKWLKADLAKINRKKTPWIFVLLHAPWYNTNTAHQGEGESMRNSMEELLYNARVDVVFAGHVHAY 340 (454)
Q Consensus 269 --------~~~~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~y 340 (454)
.....+|++||++.|++.. .+|+|+++|+|++..... .....+++.|.++|.+++|+++|+||+|.+
T Consensus 151 ~~~~~~~~~~~~~~q~~wL~~~L~~~~---~~~~iv~~H~p~~~~~~~--~~~~~~~~~l~~~l~~~~v~~~l~GH~H~~ 225 (313)
T 1ute_A 151 QQPERPRNLALARTQLAWIKKQLAAAK---EDYVLVAGHYPVWSIAEH--GPTHCLVKQLLPLLTTHKVTAYLCGHDHNL 225 (313)
T ss_dssp CSCCSCSCHHHHHHHHHHHHHHHHHCC---CSEEEEECSSCSSCCSSS--CCCHHHHHHTHHHHHHTTCSEEEECSSSSE
T ss_pred cccCCccccchHHHHHHHHHHHHHhCC---CCeEEEEECCCCccCCCC--CCcHHHHHHHHHHHHHcCCcEEEECChhhh
Confidence 0124799999999999873 479999999999876542 223356788999999999999999999999
Q ss_pred eeeecccCCCcCCCCcEEEEECCCCCCCCcccccCCCCCCCceeeec----ccCEEEEEEecCCeEEEEEEEecCCCcee
Q 012895 341 ERFTRIYDNKADPCGPIYITIGDGGNREGLALEFKEPKSPLSMFQES----SFGHARLKILDETRAHWSWYRNNDSDAVI 416 (454)
Q Consensus 341 ~r~~~~~~~~~~~~g~~yi~~G~gG~~~~~~~~~~~~~p~~~~~~~~----~~G~~~l~v~~~~~~~~~~~~~~dg~~~~ 416 (454)
++..+ .+|+.||++|++|............++.+..|... ..||.+|++ +.+.+.++|+.. +|+ +
T Consensus 226 ~~~~~-------~~g~~~i~~gs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gy~~l~v-~~~~~~~~~~~~-~g~--~ 294 (313)
T 1ute_A 226 QYLQD-------ENGLGFVLSGAGNFMDPSKKHLRKVPNGYLRFHFGAENSLGGFAYVEI-TPKEMSVTYIEA-SGK--S 294 (313)
T ss_dssp EEEEC-------TTCCEEEEECBSSCCCCCCTTGGGSCTTCEEEEECCTTSCCEEEEEEE-CSSCEEEEEEET-TSC--E
T ss_pred hhccC-------CCCceEEEECCCcCcCccccccccCCCcccceeccCcCCCCceEEEEE-EcCEEEEEEEcC-CCc--E
Confidence 88763 35889999999886432111000111233445433 379999998 456899999985 776 8
Q ss_pred eeEEEEEEcCC
Q 012895 417 ADEVRLESLST 427 (454)
Q Consensus 417 ~D~~~i~~~~~ 427 (454)
+|+|+|.|...
T Consensus 295 ~~~~~l~~~~~ 305 (313)
T 1ute_A 295 LFKTKLPRRAR 305 (313)
T ss_dssp EEEEEECCCC-
T ss_pred EEEEEeccccC
Confidence 99999998754
No 6
>3ib7_A ICC protein; metallophosphoesterase, alpha-beta fold, swapped-dimer, HYDR; HET: BTB; 1.60A {Mycobacterium tuberculosis} PDB: 3ib8_A* 2hy1_A 2hyp_A 2hyo_A
Probab=99.92 E-value=4.1e-24 Score=209.29 Aligned_cols=238 Identities=16% Similarity=0.155 Sum_probs=161.3
Q ss_pred CCCeEEEEEecCCCCCC-------------hHHHHHHhhc--CCCCeEeecCccccCCCChhhHHHHhhhhhhhhc--CC
Q 012895 145 NFPIEFAIVGDLGQTEW-------------TNSTLDHVGS--KDYDVFLLPGDLSYADFQQPLWDSFGRLVEPYAS--SR 207 (454)
Q Consensus 145 ~~~~~f~~igD~~~~~~-------------~~~~l~~i~~--~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~--~~ 207 (454)
..++||+++||+|.... ..++++.+.+ .++|+||++||+++.+. ...|+.+.+.++++.. .+
T Consensus 23 ~~~~ri~~iSD~H~~~~~~~~~~~~~~~~~l~~~l~~i~~~~~~~d~vi~~GDl~~~~~-~~~~~~~~~~l~~l~~~~~~ 101 (330)
T 3ib7_A 23 RPDYVLLHISDTHLIGGDRRLYGAVDADDRLGELLEQLNQSGLRPDAIVFTGDLADKGE-PAAYRKLRGLVEPFAAQLGA 101 (330)
T ss_dssp CCSEEEEEECCCCBCSSSCCBTTTBCHHHHHHHHHHHHHHHTCCCSEEEECSCCBTTCC-HHHHHHHHHHHHHHHHHHTC
T ss_pred CCCeEEEEEeCCccCCCCcccccccCHHHHHHHHHHHHHhcCCCCCEEEECCCCCCCCC-HHHHHHHHHHHHHHHhhcCC
Confidence 67899999999997422 1235566655 79999999999997654 3566677777776643 58
Q ss_pred CeeecCCCcccCCCCCCCcchhhhhhhhccCCCCCCCCCCCceEEEEeCeEEEEEecccCC----CCCCHHHHHHHHHHH
Q 012895 208 PWMVTEGNHEIESIPIILPHAFKAYNARWLMPYEESGSSSNLYYSFDIAGAHIIMLGSYTD----FDEDSAQYKWLKADL 283 (454)
Q Consensus 208 P~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~Lds~~~----~~~~~~Q~~WL~~~L 283 (454)
|+++++||||+. ..+....... + ......+|.+++++++|++||+... .....+|++||++.|
T Consensus 102 pv~~v~GNHD~~-------~~~~~~~~~~--~----~~~~~~~~~~~~~~~~~i~lds~~~~~~~~~~~~~q~~wl~~~l 168 (330)
T 3ib7_A 102 ELVWVMGNHDDR-------AELRKFLLDE--A----PSMAPLDRVCMIDGLRIIVLDTSVPGHHHGEIRASQLGWLAEEL 168 (330)
T ss_dssp EEEECCCTTSCH-------HHHHHHHHCC--C----CCCSCCCEEEEETTEEEEECCCCCTTCCSBCCCHHHHHHHHHHT
T ss_pred CEEEeCCCCCCH-------HHHHHHhccc--c----cccCCcceEEEeCCEEEEEecCCCCCCCCCccCHHHHHHHHHHH
Confidence 999999999983 1222211111 1 1123578999999999999998642 124689999999999
Q ss_pred HhhccCCCCeEEEEEccccccCCCCCCC-CcHHHHHHHHHHHHhcCCcEEEecccccceeeecccCCCcCCCCcEEEEEC
Q 012895 284 AKINRKKTPWIFVLLHAPWYNTNTAHQG-EGESMRNSMEELLYNARVDVVFAGHVHAYERFTRIYDNKADPCGPIYITIG 362 (454)
Q Consensus 284 ~~~~~~~~~w~Iv~~H~P~~~~~~~~~~-~~~~~~~~l~~ll~~~~v~lvl~GH~H~y~r~~~~~~~~~~~~g~~yi~~G 362 (454)
+.... ..+|+++|||++........ .....++.|.+++.+++++++|+||+|..+... .+|+.+++.|
T Consensus 169 ~~~~~---~~~iv~~Hh~p~~~~~~~~~~~~~~~~~~l~~~l~~~~v~~v~~GH~H~~~~~~--------~~g~~~~~~g 237 (330)
T 3ib7_A 169 ATPAP---DGTILALHHPPIPSVLDMAVTVELRDQAALGRVLRGTDVRAILAGHLHYSTNAT--------FVGIPVSVAS 237 (330)
T ss_dssp TSCCT---TCEEEECSSCSSCCSSGGGGGGSBSCHHHHHHHHTTSSEEEEEECSSSSCEEEE--------ETTEEEEECC
T ss_pred Hhccc---CCeEEEEECCCCCCCccccccccccCHHHHHHHHhccCceEEEECCCCCcccce--------ECCEEEEecC
Confidence 88743 23789999998765322110 011235789999999999999999999977543 1477787777
Q ss_pred CCCCCCCcccccCCCCCCCceeeecccCEEEEEEecCCeEEEEEEEecCCC
Q 012895 363 DGGNREGLALEFKEPKSPLSMFQESSFGHARLKILDETRAHWSWYRNNDSD 413 (454)
Q Consensus 363 ~gG~~~~~~~~~~~~~p~~~~~~~~~~G~~~l~v~~~~~~~~~~~~~~dg~ 413 (454)
+.+... ....+ ...........||..|++. ...+.++++..+.+.
T Consensus 238 s~~~~~----~~~~~-~g~~~~~~~~~gy~iv~i~-~~~~~~~~v~~~~~~ 282 (330)
T 3ib7_A 238 ATCYTQ----DLTVA-AGGTRGRDGAQGCNLVHVY-PDTVVHSVIPLGGGE 282 (330)
T ss_dssp CSSCEE----CTTSC-TTCCCEESCSCEEEEEEEC-SSCEEEEEEECSCCC
T ss_pred cceecc----CCCCC-CcceeccCCCCceEEEEEE-CCCeEEEEeccCCCC
Confidence 665421 11111 1111223345689999985 457888998865543
No 7
>3d03_A Phosphohydrolase; glycerophosphodiesterase, metallohydrolase, phosphatase, metal ION; 1.90A {Enterobacter aerogenes} SCOP: d.159.1.11 PDB: 2zoa_A 2zo9_B 2dxn_A 2dxl_A
Probab=99.90 E-value=1.6e-22 Score=192.54 Aligned_cols=232 Identities=12% Similarity=0.117 Sum_probs=151.0
Q ss_pred eEEEEEecCCCCCC-------------hHHHHHHhhc--CCCCeEeecCccccCCCChhhHHHHhhhhhhhhcCCCeeec
Q 012895 148 IEFAIVGDLGQTEW-------------TNSTLDHVGS--KDYDVFLLPGDLSYADFQQPLWDSFGRLVEPYASSRPWMVT 212 (454)
Q Consensus 148 ~~f~~igD~~~~~~-------------~~~~l~~i~~--~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~~~P~~~v 212 (454)
+||++++|+|.... ..++++.+++ .++|+||++||+++.+. ...|+.+.+.++.+ .+|++++
T Consensus 1 mri~~iSD~H~~~~~~~~~g~~~~~~~l~~~l~~~~~~~~~~d~vi~~GDl~~~~~-~~~~~~~~~~l~~l--~~p~~~v 77 (274)
T 3d03_A 1 MLLAHISDTHFRSRGEKLYGFIDVNAANADVVSQLNALRERPDAVVVSGDIVNCGR-PEEYQVARQILGSL--NYPLYLI 77 (274)
T ss_dssp CEEEEECCCCBCSTTCCBTTTBCHHHHHHHHHHHHHTCSSCCSEEEEESCCBSSCC-HHHHHHHHHHHTTC--SSCEEEE
T ss_pred CEEEEEecCCcCCCCcccccccCHHHHHHHHHHHHHhcCCCCCEEEECCCCCCCCC-HHHHHHHHHHHHhc--CCCEEEE
Confidence 68999999998641 1234555554 37899999999998554 34566666666554 4899999
Q ss_pred CCCcccCCCCCCCcchhh-hhhhhccCCCCCCCCCCCceEEEEeCeEEEEEecccCC----CCCCHHHHHHHHHHHHhhc
Q 012895 213 EGNHEIESIPIILPHAFK-AYNARWLMPYEESGSSSNLYYSFDIAGAHIIMLGSYTD----FDEDSAQYKWLKADLAKIN 287 (454)
Q Consensus 213 ~GNHD~~~~~~~~~~~~~-~~~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~Lds~~~----~~~~~~Q~~WL~~~L~~~~ 287 (454)
+||||... .+. .+...| ++.... .+..+|.++.++++|++||+... .....+|++||++.|++.
T Consensus 78 ~GNHD~~~-------~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~~~i~ld~~~~~~~~~~~~~~~~~wl~~~l~~~- 146 (274)
T 3d03_A 78 PGNHDDKA-------LFLEYLQPLC-PQLGSD--ANNMRCAVDDFATRLLFIDSSRAGTSKGWLTDETISWLEAQLFEG- 146 (274)
T ss_dssp CCTTSCHH-------HHHHHHGGGS-GGGCSC--GGGCCEEECSSSSEEEECCCCCTTCSSBCCCHHHHHHHHHHHHHH-
T ss_pred CCCCCCHH-------HHHHHhhhhh-cCcccC--CCceEEEEEeCCEEEEEEeCCCCCCCCCeeCHHHHHHHHHHHHhC-
Confidence 99999831 111 121111 111000 01357889999999999998642 224689999999999986
Q ss_pred cCCCCeEEEEEccccccCCCCCCC-CcHHHHHHHHHHHHhc-CCcEEEecccccceeeecccCCCcCCCCcEEEEECCCC
Q 012895 288 RKKTPWIFVLLHAPWYNTNTAHQG-EGESMRNSMEELLYNA-RVDVVFAGHVHAYERFTRIYDNKADPCGPIYITIGDGG 365 (454)
Q Consensus 288 ~~~~~w~Iv~~H~P~~~~~~~~~~-~~~~~~~~l~~ll~~~-~v~lvl~GH~H~y~r~~~~~~~~~~~~g~~yi~~G~gG 365 (454)
+..++|+++|+|++.....+.. ......+.+.+++.++ +++++|+||+|..+.... .|+.++++++.+
T Consensus 147 --~~~~~iv~~H~p~~~~~~~~~~~~~~~~~~~l~~~l~~~~~v~~vl~GH~H~~~~~~~--------~g~~~~~~pg~~ 216 (274)
T 3d03_A 147 --GDKPATIFMHHPPLPLGNAQMDPIACENGHRLLALVERFPSLTRIFCGHNHSLTMTQY--------RQALISTLPGTV 216 (274)
T ss_dssp --TTSCEEEEESSCSSCCSCTTTGGGSBTTTHHHHHHHHHCTTEEEEEECSSSSCEEEEE--------TTEEEEECCCSS
T ss_pred --CCCCEEEEECCCCcccCCcccCcccCcCHHHHHHHHHhCCCceEEEeCCCCCchhheE--------CCEEEEEcCCcc
Confidence 2346999999999875432111 0112356888999998 899999999999776541 354455444332
Q ss_pred CCCCcccccCCCCCCC-ceeeecccCEEEEEEecCCeEEEEEEEec
Q 012895 366 NREGLALEFKEPKSPL-SMFQESSFGHARLKILDETRAHWSWYRNN 410 (454)
Q Consensus 366 ~~~~~~~~~~~~~p~~-~~~~~~~~G~~~l~v~~~~~~~~~~~~~~ 410 (454)
.... .. .+.+ ..+.....||..+++.+ ..+.+++++..
T Consensus 217 ~~~~----~~--~~~~~~~~~~~~~gy~i~~i~~-~~~~~~~~~~~ 255 (274)
T 3d03_A 217 HQVP----YC--HADTDPYYDLSPASCLMHRQVG-EQWVSYQHSLA 255 (274)
T ss_dssp CBCC----CC--SSCCSCEEBCCCCEEEEEEEET-TEEEEEEEECS
T ss_pred eeec----cC--CCccccccccCCCceEEEEEeC-CcEEEEEEecC
Confidence 2111 11 1111 23444567999999865 47888888764
No 8
>2nxf_A Putative dimetal phosphatase; dinuclear metal center phosphatase, metalloprotein, metallophosphoesterase, protein structure initiative; 1.70A {Danio rerio} SCOP: d.159.1.12
Probab=99.89 E-value=2.4e-22 Score=195.43 Aligned_cols=225 Identities=16% Similarity=0.155 Sum_probs=146.6
Q ss_pred CCCeEEEEEecCCCCCCh--------------------HHHHHHhhcCCCCeEeecCccccCCCCh--hhHHHHhhhhhh
Q 012895 145 NFPIEFAIVGDLGQTEWT--------------------NSTLDHVGSKDYDVFLLPGDLSYADFQQ--PLWDSFGRLVEP 202 (454)
Q Consensus 145 ~~~~~f~~igD~~~~~~~--------------------~~~l~~i~~~~pd~vl~~GDl~y~~~~~--~~~~~~~~~~~~ 202 (454)
...+||++++|+|..... .++++.+.+.+||+||++||+++..... ..++.+...++.
T Consensus 3 ~~~~~i~~isD~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~d~vi~~GD~~~~~~~~~~~~~~~~~~~~~~ 82 (322)
T 2nxf_A 3 DPVFTFGLIADVQYADIEDGENYLRTRRRYYRGSADLLRDAVLQWRRERVQCVVQLGDIIDGHNRRRDASDRALDTVMAE 82 (322)
T ss_dssp CCSEEEEEECCCCBCSSCCEECTTSSSEECTTHHHHHHHHHHHHHHHTTCSEEEECSCCBCTHHHHTTCHHHHHHHHHHH
T ss_pred CCceEEEEEeeccccccCcccccccchHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCccCCCCCcchHHHHHHHHHHHH
Confidence 357999999999986521 2344455568999999999999854311 013333334444
Q ss_pred hhc-CCCeeecCCCcccCCCCCCCcchhhhhhhhcc-------------CCCCCCCCCCCceEEEEe-CeEEEEEecccC
Q 012895 203 YAS-SRPWMVTEGNHEIESIPIILPHAFKAYNARWL-------------MPYEESGSSSNLYYSFDI-AGAHIIMLGSYT 267 (454)
Q Consensus 203 l~~-~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~~-------------~p~~~~~~~~~~~ys~~~-g~v~fi~Lds~~ 267 (454)
+.. .+|+++++||||..... ...+.+.+. +|. .+..||+|+. ++++||+||+..
T Consensus 83 l~~~~~p~~~v~GNHD~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~y~~~~~~~~~~i~ld~~~ 151 (322)
T 2nxf_A 83 LDACSVDVHHVWGNHEFYNFS------RPSLLSSRLNSAQRTGTDTGSDLIG-----DDIYAYEFSPAPNFRFVLLDAYD 151 (322)
T ss_dssp HHTTCSEEEECCCHHHHHHCC------HHHHHTSTTCCCC------CEECGG-----GTCCCEEEEEETTEEEEECCTTS
T ss_pred HHhcCCcEEEecCCCCcccCC------HHHHhhhhCCcccccccccccccCC-----CCceEEEEecCCCEEEEEEcCce
Confidence 333 47999999999994211 112222222 121 1356899998 899999999854
Q ss_pred C----------------------------------------------CCCCHHHHHHHHHHHHhhccCCCCeEEEEEccc
Q 012895 268 D----------------------------------------------FDEDSAQYKWLKADLAKINRKKTPWIFVLLHAP 301 (454)
Q Consensus 268 ~----------------------------------------------~~~~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P 301 (454)
. .....+|++||+++|++..++ ..++||++|+|
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~q~~wL~~~L~~~~~~-~~~~iv~~H~p 230 (322)
T 2nxf_A 152 LSVIGREEESEKHTHSWRILTQHNHNLQDLNLPPVSVGLEQRFVKFNGGFSEQQLQWLDAVLTLSDHK-QERVLIFSHLP 230 (322)
T ss_dssp BCSSSSCTTSHHHHHHHHHHHHHCCCTTCTTSCSCSSSGGGGCSTTCCBCCHHHHHHHHHHHHHHHHH-TCEEEEEESSC
T ss_pred ecccccCCCChhhHHHHHHHhhcCcccccccCccccccccccccccCCccCHHHHHHHHHHHHHHHhc-CCcEEEEEccC
Confidence 1 012489999999999987542 34589999999
Q ss_pred cccCCCCCCCCcHHHHHHHHHHHHhc-CCcEEEecccccceeeecccCCCcCCCCcEEEEECCCCCCCCcccccCCCCCC
Q 012895 302 WYNTNTAHQGEGESMRNSMEELLYNA-RVDVVFAGHVHAYERFTRIYDNKADPCGPIYITIGDGGNREGLALEFKEPKSP 380 (454)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~l~~ll~~~-~v~lvl~GH~H~y~r~~~~~~~~~~~~g~~yi~~G~gG~~~~~~~~~~~~~p~ 380 (454)
++........ ....++.|.+++.++ +|+++|+||+|.+++... ..|+.|++.|+.- . . +
T Consensus 231 ~~~~~~~~~~-~~~~~~~~~~ll~~~~~v~~~~~GH~H~~~~~~~-------~~g~~~i~~~~~~-----~--~--~--- 290 (322)
T 2nxf_A 231 VHPCAADPIC-LAWNHEAVLSVLRSHQSVLCFIAGHDHDGGRCTD-------SSGAQHITLEGVI-----E--T--P--- 290 (322)
T ss_dssp CCTTSSCGGG-SCTTHHHHHHHHHTCTTEEEEEECSCTTCEEEEC-------TTSCEEEECCCGG-----G--C--C---
T ss_pred CCCCCCCccc-cccCHHHHHHHHhcCCCeEEEEcCCcCCCCceec-------cCCceEEEecchh-----h--C--C---
Confidence 9875432100 011357889999999 799999999999887651 2477787765431 1 1 1
Q ss_pred CceeeecccCEEEEEEecCCeEEEEEE
Q 012895 381 LSMFQESSFGHARLKILDETRAHWSWY 407 (454)
Q Consensus 381 ~~~~~~~~~G~~~l~v~~~~~~~~~~~ 407 (454)
....||..+++.+ ..+.+..+
T Consensus 291 -----~~~~~y~~v~~~~-~~~~~~~~ 311 (322)
T 2nxf_A 291 -----PHSHAFATAYLYE-DRMVMKGR 311 (322)
T ss_dssp -----TTSCEEEEEEECS-SEEEEEEE
T ss_pred -----CCCCcEEEEEEEC-CeEEEEec
Confidence 1134788888754 45666544
No 9
>2xmo_A LMO2642 protein; phosphodiesterase, hydrolase; 1.70A {Listeria monocytogenes}
Probab=99.84 E-value=2.3e-19 Score=183.08 Aligned_cols=197 Identities=17% Similarity=0.217 Sum_probs=129.3
Q ss_pred CCCeEEEEEecCCCCCC-----------------------hH----HHHHHhhcCCCCeEeecCccccCCCChhhHHHHh
Q 012895 145 NFPIEFAIVGDLGQTEW-----------------------TN----STLDHVGSKDYDVFLLPGDLSYADFQQPLWDSFG 197 (454)
Q Consensus 145 ~~~~~f~~igD~~~~~~-----------------------~~----~~l~~i~~~~pd~vl~~GDl~y~~~~~~~~~~~~ 197 (454)
..++||++++|+|.... .. .+++.+++.+||+||++||+++.+.. ..++.+.
T Consensus 37 ~~~~~i~~iSD~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~d~vi~~GDl~~~~~~-~~~~~~~ 115 (443)
T 2xmo_A 37 DRNLSMVVTTDVHYFAPSLTDNGKAFEKYVAAGDGKQLAYSDEITDAFLADVESKKTDVLIISGDLTNNGEK-TSHEELA 115 (443)
T ss_dssp CCCEEEEEECCCCBCCGGGBCCCHHHHHHHHTSTTCCGGGHHHHHHHHHHHHHHHTCSEEEEESCCBSSCCH-HHHHHHH
T ss_pred CCCeEEEEEeCCCCCCccccccchhhhcccccccccccccHHHHHHHHHHHHHHcCCCEEEECCCCCCCCCH-HHHHHHH
Confidence 57899999999997532 12 23444556789999999999986543 3566666
Q ss_pred hhhhhhhc-CCCeeecCCCcccCCCCCCC----------cchhhhhhhhccCC-CCCC---CCCCCceEEEEeCeEEEEE
Q 012895 198 RLVEPYAS-SRPWMVTEGNHEIESIPIIL----------PHAFKAYNARWLMP-YEES---GSSSNLYYSFDIAGAHIIM 262 (454)
Q Consensus 198 ~~~~~l~~-~~P~~~v~GNHD~~~~~~~~----------~~~~~~~~~~~~~p-~~~~---~~~~~~~ys~~~g~v~fi~ 262 (454)
+.++.+.. .+|+++++||||+....... ......|.+.|... .... ......|+.+..++++|++
T Consensus 116 ~~l~~l~~~~~~~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~i~ 195 (443)
T 2xmo_A 116 KKLTQVEKNGTQVFVVPGNHDINNPWARKFEKDKQLPTDTISPTDFSKIYSDFGYEDAISSDEFSLSYLAAPSSKVWLLM 195 (443)
T ss_dssp HHHHHHHHTTCEEEEECCTTTSSCTTCEEEETTEEEECCCCCHHHHHHHTCCCCCTTCSEECSSSSCEEECSBSSEEEEE
T ss_pred HHHHHHHhCCCeEEEECCcCCCCCccccccCCcccccccccCHHHHHHHhhhcChhhhhccCCCCceEEEecCCCEEEEE
Confidence 66666643 58999999999995421100 00122333333211 0000 0011234445578899999
Q ss_pred ecccCC------------CCCCHHHHHHHHHHHHhhccCCCCeEEEEEccccccCCCCCCC-CcHHHHHHHHHHHHhcCC
Q 012895 263 LGSYTD------------FDEDSAQYKWLKADLAKINRKKTPWIFVLLHAPWYNTNTAHQG-EGESMRNSMEELLYNARV 329 (454)
Q Consensus 263 Lds~~~------------~~~~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~~~~~~~-~~~~~~~~l~~ll~~~~v 329 (454)
||+... .....+|++||++.|++.... ...+|+++|+|++........ .....++.+.+++.+++|
T Consensus 196 Lds~~~~~~~~~~~~~~~g~~~~~ql~wL~~~L~~~~~~-~~~~Iv~~H~p~~~~~~~~~~~~~~~~~~~l~~ll~~~~v 274 (443)
T 2xmo_A 196 LDTAIYKTNMQQGNPTTEGGLTAGTLDWIKESSALAKKN-GAKLIPVLHHNLTDHNDVIQKGYTINYNQQVIDALTEGAM 274 (443)
T ss_dssp CCCBCCTTHHHHTSCCCCBCCCHHHHHHHHHHHHHHHHT-TCEEEEECSSBSSCSSCC--CCSBCTTHHHHHHHHHHTTC
T ss_pred eeCCCcCcccccCCCCcCCccCHHHHHHHHHHHHHHHHc-CCeEEEEECCCCcccccccccccccccHHHHHHHHHHcCC
Confidence 998642 124689999999999987542 345899999999865432211 111246789999999999
Q ss_pred cEEEecccccceee
Q 012895 330 DVVFAGHVHAYERF 343 (454)
Q Consensus 330 ~lvl~GH~H~y~r~ 343 (454)
+++|+||+|.....
T Consensus 275 ~lvl~GH~H~~~~~ 288 (443)
T 2xmo_A 275 DFSLSGHIHTQNIR 288 (443)
T ss_dssp CEEEECSSCSCEEE
T ss_pred eEEEECCcccCchh
Confidence 99999999996654
No 10
>1uf3_A Hypothetical protein TT1561; metallo-dependent phosphatases, structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.10A {Thermus thermophilus} SCOP: d.159.1.6
Probab=99.63 E-value=5.1e-16 Score=143.13 Aligned_cols=171 Identities=10% Similarity=0.006 Sum_probs=99.8
Q ss_pred CCeEEEEEecCCCCCCh-HHHHHHhhcCCCCeEeecCccccCCCChhhHHHHhhhhhhhhcCCCeeecCCCcccCCCCCC
Q 012895 146 FPIEFAIVGDLGQTEWT-NSTLDHVGSKDYDVFLLPGDLSYADFQQPLWDSFGRLVEPYASSRPWMVTEGNHEIESIPII 224 (454)
Q Consensus 146 ~~~~f~~igD~~~~~~~-~~~l~~i~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~~ 224 (454)
..+||+++||+|..... .++++.+.+.++|+||++||+++.......+..+.+.++.+ ..|+++++||||....
T Consensus 4 ~~mri~~iSD~H~~~~~~~~~~~~~~~~~~D~vi~~GDl~~~~~~~~~~~~~~~~l~~~--~~pv~~v~GNHD~~~~--- 78 (228)
T 1uf3_A 4 TVRYILATSNPMGDLEALEKFVKLAPDTGADAIALIGNLMPKAAKSRDYAAFFRILSEA--HLPTAYVPGPQDAPIW--- 78 (228)
T ss_dssp CCCEEEEEECCTTCHHHHHHHHTHHHHHTCSEEEEESCSSCTTCCHHHHHHHHHHHGGG--CSCEEEECCTTSCSHH---
T ss_pred ceEEEEEEeeccCCHHHHHHHHHHHhhcCCCEEEECCCCCCCCCCHHHHHHHHHHHHhc--CCcEEEECCCCCchhH---
Confidence 35899999999986422 23444455568999999999997653433333444433332 4799999999998421
Q ss_pred Ccchhhhhhhhc----cCCCCCCCCCCCceEEEEeC-eEEEEEecccC--CCCCCHHHH--------HHHHHHHHhhccC
Q 012895 225 LPHAFKAYNARW----LMPYEESGSSSNLYYSFDIA-GAHIIMLGSYT--DFDEDSAQY--------KWLKADLAKINRK 289 (454)
Q Consensus 225 ~~~~~~~~~~~~----~~p~~~~~~~~~~~ys~~~g-~v~fi~Lds~~--~~~~~~~Q~--------~WL~~~L~~~~~~ 289 (454)
..+...+ ..|.... .... .+.++ +++|++++... .+....+|+ .|+++.|++..
T Consensus 79 -----~~~~~~~~~~~~~~~~~~--l~~~--~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-- 147 (228)
T 1uf3_A 79 -----EYLREAANVELVHPEMRN--VHET--FTFWRGPYLVAGVGGEIADEGEPEEHEALRYPAWVAEYRLKALWELK-- 147 (228)
T ss_dssp -----HHHHHHHHHHHHCTTEEE--CBTS--EEEETTTEEEEEECSEEESSSCCBSSSSCEEEHHHHHHHHGGGGGSC--
T ss_pred -----HHHHhhhhhhccCcceEE--cccc--eEeeCCCcEEecCCCCcCCCCccChhhcccchhhhHHHHHHHHHhCC--
Confidence 1111111 0111000 0011 24455 78999887421 111122222 33344444432
Q ss_pred CCCeEEEEEccccccCCCCCCCCcHHHHHHHHHHHHhcCCcEEEecccc
Q 012895 290 KTPWIFVLLHAPWYNTNTAHQGEGESMRNSMEELLYNARVDVVFAGHVH 338 (454)
Q Consensus 290 ~~~w~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H 338 (454)
..+.|+++|+|++....... ....+.+++.+++++++++||+|
T Consensus 148 -~~~~il~~H~p~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~GH~H 190 (228)
T 1uf3_A 148 -DYPKIFLFHTMPYHKGLNEQ-----GSHEVAHLIKTHNPLLVLVAGKG 190 (228)
T ss_dssp -SCCEEEEESSCBCBTTTBTT-----SBHHHHHHHHHHCCSEEEECCSS
T ss_pred -CCCeEEEEccCcccCCcccc-----CHHHHHHHHHHhCCCEEEEcccc
Confidence 23589999999876421111 12466778888899999999999
No 11
>2yvt_A Hypothetical protein AQ_1956; structural genomics, unknown function, NPPSFA, national PROJ protein structural and functional analyses; 1.60A {Aquifex aeolicus} SCOP: d.159.1.6
Probab=99.61 E-value=2.5e-15 Score=141.68 Aligned_cols=181 Identities=9% Similarity=0.087 Sum_probs=102.3
Q ss_pred CeEEEEEecCCCCCCh-HHHHHHhhcCCCCeEeecCccccCCCChhh-----------------------HHHHhhhhhh
Q 012895 147 PIEFAIVGDLGQTEWT-NSTLDHVGSKDYDVFLLPGDLSYADFQQPL-----------------------WDSFGRLVEP 202 (454)
Q Consensus 147 ~~~f~~igD~~~~~~~-~~~l~~i~~~~pd~vl~~GDl~y~~~~~~~-----------------------~~~~~~~~~~ 202 (454)
++||+++||+|..... .++++.+...++|+||++||+++....... .+.+.++++.
T Consensus 5 ~mri~~iSDlH~~~~~~~~~l~~~~~~~~D~vi~~GDl~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~ 84 (260)
T 2yvt_A 5 PRKVLAIKNFKERFDLLPKLKGVIAEKQPDILVVVGNILKNEALEKEYERAHLARREPNRKVIHENEHYIIETLDKFFRE 84 (260)
T ss_dssp CCEEEEEECCTTCGGGHHHHHHHHHHHCCSEEEEESCCCCCHHHHHHHHHHHHTTCCCCTHHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEEeecCCChHHHHHHHHHHHhcCCCEEEECCCCCCccCcchhhhhhhhhhcccchhhhhHHHHHHHHHHHHHHHH
Confidence 5899999999986533 456666666799999999999975422100 0224445555
Q ss_pred hhc-CCCeeecCCCcccCCCCCCCcchhhhhhhhcc-CCCCCCCCCCCceEEEEeCeEEEEEecccCCC-CCCHHHHH--
Q 012895 203 YAS-SRPWMVTEGNHEIESIPIILPHAFKAYNARWL-MPYEESGSSSNLYYSFDIAGAHIIMLGSYTDF-DEDSAQYK-- 277 (454)
Q Consensus 203 l~~-~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~~-~p~~~~~~~~~~~ys~~~g~v~fi~Lds~~~~-~~~~~Q~~-- 277 (454)
+.. ..|+++++||||..... .+........ .|.. ..-.....+.+++++|++++..... ....+++.
T Consensus 85 l~~~~~pv~~v~GNHD~~~~~-----~~~~~~~~~~~~~~~---~~l~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~ 156 (260)
T 2yvt_A 85 IGELGVKTFVVPGKNDAPLKI-----FLRAAYEAETAYPNI---RVLHEGFAGWRGEFEVIGFGGLLTEHEFEEDFVLKY 156 (260)
T ss_dssp HHTTCSEEEEECCTTSCCHHH-----HHHHHHHTTTTCTTE---EECSSEEEEETTTEEEEEECSEEESSCCBSSSSCEE
T ss_pred HHhcCCcEEEEcCCCCchhhh-----hHHHHhhhccCCcce---EEecCcceEEECCEEEEecCCCcCCCCcCHHHHhhc
Confidence 544 48999999999984110 0001111110 0000 0001112367888999999753211 11122222
Q ss_pred --HHH----HHHHhhccCCCCeEEEEEccccccCCCCCC--CCcHHHHHHHHHHHHhcCCcEEEecccc
Q 012895 278 --WLK----ADLAKINRKKTPWIFVLLHAPWYNTNTAHQ--GEGESMRNSMEELLYNARVDVVFAGHVH 338 (454)
Q Consensus 278 --WL~----~~L~~~~~~~~~w~Iv~~H~P~~~~~~~~~--~~~~~~~~~l~~ll~~~~v~lvl~GH~H 338 (454)
|+. +.|.+.. . ...|+++|+|++....... .......+.+.+++.+++++++++||+|
T Consensus 157 ~~~~~~~~l~~l~~~~--~-~~~Il~~H~pp~~~~~d~~~~~~~~~~~~~l~~~~~~~~~~~vl~GH~H 222 (260)
T 2yvt_A 157 PRWYVEYILKFVNELK--P-RRLVTIFYTPPIGEFVDRTPEDPKHHGSAVVNTIIKSLNPEVAIVGHVG 222 (260)
T ss_dssp EHHHHHHHGGGGGGSC--C-CEEEEEESSCCSCSSTTCBTTBSCCCSCHHHHHHHHHHCCSEEEECSSC
T ss_pred chhhHHHHHHHHHhcC--C-CCEEEEECCCccccccccCcccccccCcHHHHHHHHHhCCCEEEECCcc
Confidence 443 2333221 2 2469999999875311110 0001122567778888999999999999
No 12
>2q8u_A Exonuclease, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE; 2.20A {Thermotoga maritima MSB8} PDB: 3thn_A
Probab=99.61 E-value=3.6e-15 Score=146.40 Aligned_cols=244 Identities=13% Similarity=0.103 Sum_probs=127.9
Q ss_pred CCCeEEEEEecCCCC----CC-------------hHHHHHHhhcCCCCeEeecCc-cccCCCCh-hhHHHHhhhhhhhhc
Q 012895 145 NFPIEFAIVGDLGQT----EW-------------TNSTLDHVGSKDYDVFLLPGD-LSYADFQQ-PLWDSFGRLVEPYAS 205 (454)
Q Consensus 145 ~~~~~f~~igD~~~~----~~-------------~~~~l~~i~~~~pd~vl~~GD-l~y~~~~~-~~~~~~~~~~~~l~~ 205 (454)
...+||++++|+|.+ .. ..++++.+.+.+||+||++|| +++..... .....+.+.++.+..
T Consensus 16 ~~~mrilh~SD~HlG~~~~~~~~~~~r~~~~~~~l~~lv~~~~~~~~D~vliaGD~l~d~~~~~~~~~~~~~~~l~~L~~ 95 (336)
T 2q8u_A 16 LKELKILHTSDWHLGVTSWTSSRPVDRREELKKALDKVVEEAEKREVDLILLTGDLLHSRNNPSVVALHDLLDYLKRMMR 95 (336)
T ss_dssp CCEEEEEEEECCCBTCEECTTTCCEECHHHHHHHHHHHHHHHHHHTCSEEEEESCSBSCSSCCCHHHHHHHHHHHHHHHH
T ss_pred cCceEEEEECcccCCCCccccccCcChhHHHHHHHHHHHHHHHHhCCCEEEECCccccCCCCCCHHHHHHHHHHHHHHHh
Confidence 467999999999976 21 123444555789999999999 77644432 223455666666654
Q ss_pred CCCeeecCCCcccCCCCCCCcchhhhhhhhcc----CCCCCCCCCCCceEEEEeCeEEEEEecccCCC-------CCCHH
Q 012895 206 SRPWMVTEGNHEIESIPIILPHAFKAYNARWL----MPYEESGSSSNLYYSFDIAGAHIIMLGSYTDF-------DEDSA 274 (454)
Q Consensus 206 ~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~~----~p~~~~~~~~~~~ys~~~g~v~fi~Lds~~~~-------~~~~~ 274 (454)
.+|+++++||||... . ..+..+..... +..+. .....+.++.+++.|++++..... ....+
T Consensus 96 ~~pv~~i~GNHD~~~-~----~~~~~~l~~~g~nv~v~~~~---~~~~~~~~~~~~v~i~glp~~~~~~~~~~~~~~~~~ 167 (336)
T 2q8u_A 96 TAPVVVLPGNHDWKG-L----KLFGNFVTSISSDITFVMSF---EPVDVEAKRGQKVRILPFPYPDESEALRKNEGDFRF 167 (336)
T ss_dssp HSCEEECCC-------C----HHHHHHHHHHCSSEEECCSS---SCEEEECTTSCEEEEEEECCC-------CCSSHHHH
T ss_pred cCCEEEECCCCCccc-c----ccHHHHHHhcCCEEEEEecc---cccCceEEeCCCEEEEECCCCCHHHHHHHhhHHHHH
Confidence 489999999999853 1 12222222111 11100 000001122356888888643211 11246
Q ss_pred HHHHHHHHHHhhccCCCCeEEEEEccccccCCCCCCCCcHHHHHHHHHHHHhcCCcEEEecccccceeeecccCCCcCCC
Q 012895 275 QYKWLKADLAKINRKKTPWIFVLLHAPWYNTNTAHQGEGESMRNSMEELLYNARVDVVFAGHVHAYERFTRIYDNKADPC 354 (454)
Q Consensus 275 Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~y~r~~~~~~~~~~~~ 354 (454)
|++|+.+.|...-.....+.|+++|.|+....... .+.......+...+.+.++|++++||+|..+....
T Consensus 168 ~~~~~~~~l~~~~~~~~~~~Ill~H~~~~~~~~~~-~~~~~~~~~v~~~l~~~~~d~v~~GH~H~~~~~~~--------- 237 (336)
T 2q8u_A 168 FLESRLNKLYEEALKKEDFAIFMGHFTVEGLAGYA-GIEQGREIIINRALIPSVVDYAALGHIHSFREIQK--------- 237 (336)
T ss_dssp HHHHHHHHHHHHHHTCSSEEEEEEESEETTCC---------CCCEECGGGSCTTSSEEEEESCSSCEEEEE---------
T ss_pred HHHHHHHHHHHhccCCCCCEEEEECccccCCCCCC-CccchhhcccCHHHccccCCEEEEccccCceEeCC---------
Confidence 78899888865310133579999999986432110 00000000111123346899999999999776531
Q ss_pred CcEEEEECCCCCCCCcccccCCCCCCCceeeecccCEEEEEEecCCeEEEEEEEecCCCceeeeEEEE
Q 012895 355 GPIYITIGDGGNREGLALEFKEPKSPLSMFQESSFGHARLKILDETRAHWSWYRNNDSDAVIADEVRL 422 (454)
Q Consensus 355 g~~yi~~G~gG~~~~~~~~~~~~~p~~~~~~~~~~G~~~l~v~~~~~~~~~~~~~~dg~~~~~D~~~i 422 (454)
++..+.+|+.. +. .+... ...-||..+++.+.....++++.... . .+-.+.+
T Consensus 238 ~~~i~y~GS~~---~~--s~~e~--------~~~~~~~lv~i~~~~~~~v~~i~~~~-r--~~~~~~~ 289 (336)
T 2q8u_A 238 QPLTIYPGSLI---RI--DFGEE--------ADEKGAVFVELKRGEPPRYERIDASP-L--PLKTLYY 289 (336)
T ss_dssp TTEEEECCCSS---CC--SGGGT--------TCCCEEEEEEEETTSCCEEEEEECCC-C--CEEEEEE
T ss_pred CccEEECCCCc---CC--Ccccc--------CCCCEEEEEEEeCCCccEEEEEECCC-E--EEEEeec
Confidence 12223344321 11 12110 01347888998765567888888654 3 3444444
No 13
>1z2w_A Vacuolar protein sorting 29; VPS29, retromer, phosphatase, manganese, protein transport; 2.00A {Mus musculus} SCOP: d.159.1.7 PDB: 1z2x_A 3lh6_A 3lh7_A 3psn_A 3pso_A 1w24_A 2r17_A
Probab=99.46 E-value=7.5e-12 Score=112.52 Aligned_cols=179 Identities=16% Similarity=0.168 Sum_probs=109.8
Q ss_pred CCeEEEEEecCCCCCC---hHHHHHH-hhcCCCCeEeecCccccCCCChhhHHHHhhhhhhhhcCCCeeecCCCcccCCC
Q 012895 146 FPIEFAIVGDLGQTEW---TNSTLDH-VGSKDYDVFLLPGDLSYADFQQPLWDSFGRLVEPYASSRPWMVTEGNHEIESI 221 (454)
Q Consensus 146 ~~~~f~~igD~~~~~~---~~~~l~~-i~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~ 221 (454)
..+||+++||+|.... ..+.+.. +...++|+|+++||++. . ...+.++.+. .|+++++||||...
T Consensus 9 ~mm~i~~iSD~H~~~~~~~~~~~l~~~~~~~~~d~ii~~GDl~~----~----~~~~~l~~~~--~~~~~v~GNhD~~~- 77 (192)
T 1z2w_A 9 DRMLVLVLGDLHIPHRCNSLPAKFKKLLVPGKIQHILCTGNLCT----K----ESYDYLKTLA--GDVHIVRGDFDENL- 77 (192)
T ss_dssp --CEEEEECCCCBTTTCSSCCHHHHTTCCTTSCSEEEECSCCBS----H----HHHHHHHHHC--SEEEECCCTTCCCT-
T ss_pred cceEEEEEecCCCCccchhHHHHHHHHhccCCCCEEEEcCCCCC----H----HHHHHHHhcC--CCEEEEcCCcCccc-
Confidence 3489999999997532 2233443 34568999999999984 1 1223333332 58999999999831
Q ss_pred CCCCcchhhhhhhhccCCCCCCCCCCCceEEEEeCeEEEEEecccCCCCCCHHHHHHHHHHHHhhccCCCCeEEEEEccc
Q 012895 222 PIILPHAFKAYNARWLMPYEESGSSSNLYYSFDIAGAHIIMLGSYTDFDEDSAQYKWLKADLAKINRKKTPWIFVLLHAP 301 (454)
Q Consensus 222 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~Lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P 301 (454)
.+|. ...++. ..++|+++|.+
T Consensus 78 ---------------~lp~---------~~~~~~-----------------------------------~~~~i~l~Hg~ 98 (192)
T 1z2w_A 78 ---------------NYPE---------QKVVTV-----------------------------------GQFKIGLIHGH 98 (192)
T ss_dssp ---------------TSCS---------EEEEEE-----------------------------------TTEEEEEECSC
T ss_pred ---------------cCCc---------ceEEEE-----------------------------------CCEEEEEECCC
Confidence 1221 111111 12478899965
Q ss_pred cccCCCCCCCCcHHHHHHHHHHHHhcCCcEEEecccccceeeecccCCCcCCCCcEEEEECCCCCCCCcccccCCCCCCC
Q 012895 302 WYNTNTAHQGEGESMRNSMEELLYNARVDVVFAGHVHAYERFTRIYDNKADPCGPIYITIGDGGNREGLALEFKEPKSPL 381 (454)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~y~r~~~~~~~~~~~~g~~yi~~G~gG~~~~~~~~~~~~~p~~ 381 (454)
++.... ..+.+..++.+.+++++++||+|...... .+++.++..|+.+.+.. . .+
T Consensus 99 ~~~~~~--------~~~~l~~~~~~~~~d~vi~GHtH~~~~~~--------~~~~~~inpGS~~~~~~---~-~~----- 153 (192)
T 1z2w_A 99 QVIPWG--------DMASLALLQRQFDVDILISGHTHKFEAFE--------HENKFYINPGSATGAYN---A-LE----- 153 (192)
T ss_dssp CCCBTT--------CHHHHHHHHHHHSSSEEECCSSCCCEEEE--------ETTEEEEECCCTTCCCC---S-SC-----
T ss_pred cCCCCC--------CHHHHHHHHHhcCCCEEEECCcCcCccEe--------ECCEEEEECCcccccCC---C-CC-----
Confidence 543211 12456677777899999999999854332 14677887777653211 0 00
Q ss_pred ceeeecccCEEEEEEecCCeEEEEEEEecCCCceeeeEEEEEE
Q 012895 382 SMFQESSFGHARLKILDETRAHWSWYRNNDSDAVIADEVRLES 424 (454)
Q Consensus 382 ~~~~~~~~G~~~l~v~~~~~~~~~~~~~~dg~~~~~D~~~i~~ 424 (454)
.....+|..|++.+ ..+.++++..+.++ ....++.+.|
T Consensus 154 ---~~~~~~y~il~~~~-~~~~~~~~~~~~~~-~~v~~~~~~~ 191 (192)
T 1z2w_A 154 ---TNIIPSFVLMDIQA-STVVTYVYQLIGDD-VKVERIEYKK 191 (192)
T ss_dssp ---SCCCCEEEEEEEET-TEEEEEEEEEETTE-EEEEEEEEEC
T ss_pred ---cCCCCcEEEEEEEC-CEEEEEEEEccCCE-EEEEEEEEcc
Confidence 01234788999854 57888988876654 4566666654
No 14
>3rl5_A Metallophosphoesterase mpped2; alpha-beta fold, metallophosphodiesterase, active site mutan nucleotide polymorphism, hydrolase; 1.26A {Rattus norvegicus} PDB: 3rl3_A* 3rl4_A*
Probab=99.45 E-value=6.5e-13 Score=126.38 Aligned_cols=204 Identities=12% Similarity=0.020 Sum_probs=111.0
Q ss_pred CCCeEEEEEecCCCCCChHHHHHHhhcCCCCeEeecCccccCCCChhhHHHHhhhhhhhhcCCCeeecCCCcccCCCCCC
Q 012895 145 NFPIEFAIVGDLGQTEWTNSTLDHVGSKDYDVFLLPGDLSYADFQQPLWDSFGRLVEPYASSRPWMVTEGNHEIESIPII 224 (454)
Q Consensus 145 ~~~~~f~~igD~~~~~~~~~~l~~i~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~~ 224 (454)
...+||+++||+|...... .-.++|+||++||+++.+. ..+++.+.+.++.+. ..|+++++||||+..+..+
T Consensus 57 ~~~mri~~iSD~H~~~~~l------~i~~~D~vi~aGDl~~~g~-~~e~~~~~~~L~~l~-~~~v~~V~GNHD~~~d~~~ 128 (296)
T 3rl5_A 57 AGHTRFVCISDTRSRTDGI------QMPYGDILLHTGDFTELGL-PSEVKKFNDWLGNLP-YEYKIVIAGNHELTFDKEF 128 (296)
T ss_dssp TTEEEEEEEBCCTTCCTTC------CCCSCSEEEECSCCSSSCC-HHHHHHHHHHHHTSC-CSEEEECCCTTCGGGCHHH
T ss_pred CCCeEEEEEeeCCCCcchh------ccCCCCEEEECCcccCCCC-HHHHHHHHHHHHhCC-CCeEEEEcCCcccccchhh
Confidence 5679999999999865321 3368999999999998654 334455555555542 2468999999999643221
Q ss_pred Cc----chhhhhhhhccCCC----CCCCCCCCce----EEEEeCeEEEEEecccCCCC---CCHHHHHHHHHHHHhhccC
Q 012895 225 LP----HAFKAYNARWLMPY----EESGSSSNLY----YSFDIAGAHIIMLGSYTDFD---EDSAQYKWLKADLAKINRK 289 (454)
Q Consensus 225 ~~----~~~~~~~~~~~~p~----~~~~~~~~~~----ys~~~g~v~fi~Lds~~~~~---~~~~Q~~WL~~~L~~~~~~ 289 (454)
-. ..+..+...-..+. +......+.. -...+++++|++..-...+. ...++.+++.+.......
T Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~~~~~i~Gl~i~Gsp~tP~~~~~~f~~~~~~~~~~~~~~ip~- 207 (296)
T 3rl5_A 129 MADLVKQDYYRFPSVSKLKPEDFDNVQSLLTNSIYLQDSEVTVKGFRIYGAPWTPWFNGWGFNLPRGQSLLDKWNLIPE- 207 (296)
T ss_dssp HHHHTTSCGGGSHHHHTCCHHHHTTTGGGCTTSEECSSEEEEETTEEEEEECCBCC--CCTTBCCTTHHHHHHHTTSCT-
T ss_pred hhhhhcccccccccccccccchhhhHhhhcCCeEEecCCcEEECCEEEEEecCCCCCCCcCCCcchHHHHHHHHhhCCC-
Confidence 00 00000000000000 0000000111 23567889998865322111 111222244333333322
Q ss_pred CCCeEEEEEccccccCCCCCC-CCcHHHHHHHHHHH-HhcCCcEEEecccccceeeecccCCCcCCCCcEEEEECCCCC
Q 012895 290 KTPWIFVLLHAPWYNTNTAHQ-GEGESMRNSMEELL-YNARVDVVFAGHVHAYERFTRIYDNKADPCGPIYITIGDGGN 366 (454)
Q Consensus 290 ~~~w~Iv~~H~P~~~~~~~~~-~~~~~~~~~l~~ll-~~~~v~lvl~GH~H~y~r~~~~~~~~~~~~g~~yi~~G~gG~ 366 (454)
+ ..|+++|.|++....... .......+.|.+.+ ++++++++++||+|....... .+++++|..|+-|.
T Consensus 208 ~--~dILvTH~PP~g~~D~~~~~~~~~G~~~L~~~i~~~~~p~l~v~GH~H~~~~~~~-------~g~t~vvNpGs~~~ 277 (296)
T 3rl5_A 208 G--TDILMTHGPPLGFRDWVPKELQRVGCVELLNTVQRRVRPKLHVFGGIHEGYGTMT-------DGYTTYINASTCTV 277 (296)
T ss_dssp T--CSEEEESSCBTTSSCEEGGGTEECSBHHHHHHHHHTTCCSEEEECSCGGGCEEEE-------CSSCEEEECBCSCT
T ss_pred C--CeEEEECCCccccccccccccCcCChHHHHHHHHHhcCCCEEEECCccCCCceEE-------ECCEEEEECCcCCc
Confidence 2 359999999987643110 00011224566666 689999999999998433221 24678887777654
No 15
>2a22_A Vacuolar protein sorting 29; alpha-beta-BETA-alpha sandwich, structural genomics, structural genomics consortium, SGC, protein transport; 2.20A {Cryptosporidium parvum} SCOP: d.159.1.7
Probab=99.44 E-value=2.5e-12 Score=117.82 Aligned_cols=186 Identities=13% Similarity=0.193 Sum_probs=109.3
Q ss_pred CeEEEEEecCCCCCC---hHHHHHH-hhcCCCCeEeecCccccCCCChhhHHHHhhhhhhhhcCCCeeecCCCcccCCCC
Q 012895 147 PIEFAIVGDLGQTEW---TNSTLDH-VGSKDYDVFLLPGDLSYADFQQPLWDSFGRLVEPYASSRPWMVTEGNHEIESIP 222 (454)
Q Consensus 147 ~~~f~~igD~~~~~~---~~~~l~~-i~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~~ 222 (454)
.+|++++||+|.... ..+.+.. +...++|+|+++||+++ ....+.++.+. .|+++++||||.....
T Consensus 25 ~m~i~~iSD~H~~~~~~~l~~~l~~~~~~~~~D~vi~~GDl~~--------~~~l~~l~~~~--~~v~~V~GNHD~~~~~ 94 (215)
T 2a22_A 25 GDLVLLIGDLKIPYGAKELPSNFRELLATDKINYVLCTGNVCS--------QEYVEMLKNIT--KNVYIVSGDLDSAIFN 94 (215)
T ss_dssp CEEEEEECCCCTTTTCSSCCGGGHHHHHCTTCCEEEECSCCCC--------HHHHHHHHHHC--SCEEECCCTTCCSCCB
T ss_pred CcEEEEEecCCCCCChHHHHHHHHHHHhcCCCCEEEECCCCCC--------HHHHHHHHHcC--CCEEEecCCCcCcccc
Confidence 689999999997542 2233333 35678999999999984 12233344332 6899999999984211
Q ss_pred CCCcchhhhhhhhccCCCCCCCCCCCceEEEEeCeEEEEEecccCCCCCCHHHHHHHHHHHHhhccCCCCeEEEEEcccc
Q 012895 223 IILPHAFKAYNARWLMPYEESGSSSNLYYSFDIAGAHIIMLGSYTDFDEDSAQYKWLKADLAKINRKKTPWIFVLLHAPW 302 (454)
Q Consensus 223 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~Lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~ 302 (454)
. . ..+.. .+| ....+ + ...++|+++|.++
T Consensus 95 ~--~---~~~~~--~lp---------~~~~~---------------------------------~--~~~~~i~l~Hg~~ 123 (215)
T 2a22_A 95 P--D---PESNG--VFP---------EYVVV---------------------------------Q--IGEFKIGLMHGNQ 123 (215)
T ss_dssp C--C---GGGTB--CCC---------SEEEE---------------------------------E--ETTEEEEEECSTT
T ss_pred c--C---hhhHh--hCC---------ceEEE---------------------------------e--cCCeEEEEEcCCc
Confidence 0 0 00000 001 00000 0 0124789999655
Q ss_pred ccCCCCCCCCcHHHHHHHHHHHHhcCCcEEEecccccceeeecccCCCcCCCCcEEEEECCCCCCCCcccccCCCCCCCc
Q 012895 303 YNTNTAHQGEGESMRNSMEELLYNARVDVVFAGHVHAYERFTRIYDNKADPCGPIYITIGDGGNREGLALEFKEPKSPLS 382 (454)
Q Consensus 303 ~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~y~r~~~~~~~~~~~~g~~yi~~G~gG~~~~~~~~~~~~~p~~~ 382 (454)
+.... ..+.+..++.+.+++++++||+|...... .+++.++..|+.+.... ..+.
T Consensus 124 ~~~~~--------~~~~l~~~~~~~~~d~vl~GHtH~~~~~~--------~~~~~~inpGS~~~~~~----~~~~----- 178 (215)
T 2a22_A 124 VLPWD--------DPGSLEQWQRRLDCDILVTGHTHKLRVFE--------KNGKLFLNPGTATGAFS----ALTP----- 178 (215)
T ss_dssp SSSTT--------CHHHHHHHHHHHTCSEEEECSSCCCEEEE--------ETTEEEEECCCSSCCCC----TTST-----
T ss_pred cCCCC--------CHHHHHHHHhhcCCCEEEECCcCCCccEe--------eCCEEEEECCcccccCC----CCCC-----
Confidence 43211 12456677777899999999999854332 14677777777653210 0000
Q ss_pred eeeecccCEEEEEEecCCeEEEEEEEecCCCceeeeEEEEE
Q 012895 383 MFQESSFGHARLKILDETRAHWSWYRNNDSDAVIADEVRLE 423 (454)
Q Consensus 383 ~~~~~~~G~~~l~v~~~~~~~~~~~~~~dg~~~~~D~~~i~ 423 (454)
....+|..|++.+ ..+.++++..++++ ..+.+..+.
T Consensus 179 ---~~~~~y~il~i~~-~~i~~~~~~~~~~~-~~v~~~~~~ 214 (215)
T 2a22_A 179 ---DAPPSFMLMALQG-NKVVLYVYDLRDGK-TNVAMSEFS 214 (215)
T ss_dssp ---TCCCEEEEEEEET-TEEEEEEEEEETTE-EEEEEEEEE
T ss_pred ---CCCCcEEEEEEeC-CcEEEEEEEecCCe-EEEEEEEee
Confidence 1234788999854 57888888876665 345555444
No 16
>3av0_A DNA double-strand break repair protein MRE11; DNA repair, calcineurin-like phosphoesterase, ABC transporte domain-like; HET: DNA AGS; 3.10A {Methanocaldococcus jannaschii} PDB: 3auz_A*
Probab=99.43 E-value=3.8e-12 Score=127.12 Aligned_cols=179 Identities=12% Similarity=-0.046 Sum_probs=98.8
Q ss_pred CCCeEEEEEecCCCCCC--------------hHHHHHHhhcCCCCeEeecCccccCCCC-hhhHHHHhhhhhhhhc-CCC
Q 012895 145 NFPIEFAIVGDLGQTEW--------------TNSTLDHVGSKDYDVFLLPGDLSYADFQ-QPLWDSFGRLVEPYAS-SRP 208 (454)
Q Consensus 145 ~~~~~f~~igD~~~~~~--------------~~~~l~~i~~~~pd~vl~~GDl~y~~~~-~~~~~~~~~~~~~l~~-~~P 208 (454)
..++||++++|+|.+.. ...+++.+...+||+||++||+++.... ...+..+.+.++.+.. .+|
T Consensus 18 ~~~mrilhiSD~Hlg~~~~~~~~r~~~~~~~l~~~v~~~~~~~~D~VliaGDl~d~~~p~~~~~~~~~~~l~~L~~~~~p 97 (386)
T 3av0_A 18 GSHMMFVHIADNHLGYRQYNLDDREKDIYDSFKLCIKKILEIKPDVVLHSGDLFNDLRPPVKALRIAMQAFKKLHENNIK 97 (386)
T ss_dssp CCCCEEEEECCCCBTCCGGGCHHHHHHHHHHHHHHHHHHHTTCCSEEEECSCSBSSSSCCHHHHHHHHHHHHHHHHTTCE
T ss_pred CCCeEEEEEccCCCCccccCcchhhHHHHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHhcCCc
Confidence 67899999999998742 1234455567899999999999876543 2344556667777754 389
Q ss_pred eeecCCCcccCCCCCCCcchhhhhhhhccCCCCCCCCCCCceEEEEeCeEEEEEecccCCCCCCHHHHHHHHHHHHhhcc
Q 012895 209 WMVTEGNHEIESIPIILPHAFKAYNARWLMPYEESGSSSNLYYSFDIAGAHIIMLGSYTDFDEDSAQYKWLKADLAKINR 288 (454)
Q Consensus 209 ~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~Lds~~~~~~~~~Q~~WL~~~L~~~~~ 288 (454)
+++++||||....... ......+...+..-. ...++..+-+++.+++++...... .....+||...-....
T Consensus 98 v~~v~GNHD~~~~~~~-~~~~~~l~~~v~~l~------~~~v~~~~~~~v~i~gl~~~~~~~-~~~~~~~l~~l~~~~~- 168 (386)
T 3av0_A 98 VYIVAGNHEMPRRLGE-ESPLALLKDYVKILD------GKDVINVNGEEIFICGTYYHKKSK-REEMLDKLKNFESEAK- 168 (386)
T ss_dssp EEECCCGGGSCSSTTS-CCGGGGGTTTCEECS------EEEEEEETTEEEEEEEECCCCSTT-HHHHHHHHHHHHHHHH-
T ss_pred EEEEcCCCCCCccccc-cCHHHHHHHHeEEcC------CCcEEEeCCCCEEEEeCCCCCHHH-HHHHHHHHHHhhhhcc-
Confidence 9999999998532110 001111111110000 011221112458899998643321 1222334332111111
Q ss_pred CCCCeEEEEEccccccCCCCCCCCcHHHHHHHHHHHHhcCCcEEEeccccccee
Q 012895 289 KKTPWIFVLLHAPWYNTNTAHQGEGESMRNSMEELLYNARVDVVFAGHVHAYER 342 (454)
Q Consensus 289 ~~~~w~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~y~r 342 (454)
...+.|+++|+|+........... . .. +. ++|++++||+|..+.
T Consensus 169 -~~~~~Ill~H~~~~~~~~~~~~~~--~-~~----l~--~~d~v~~GH~H~~~~ 212 (386)
T 3av0_A 169 -NYKKKILMLHQGINPYIPLDYELE--H-FD----LP--KFSYYALGHIHKRIL 212 (386)
T ss_dssp -TCSSEEEEECCCCTTTSSSSCSSC--G-GG----SC--CCSEEEECSCCSCEE
T ss_pred -cCCCEEEEECcCccccCCCCcccC--H-HH----hh--hCCeEEccCCCCCcc
Confidence 123589999999754211100000 0 11 11 399999999998743
No 17
>3qfm_A SAPH, putative uncharacterized protein; sandwich fold, asymmetric AP4A hydrolase, phosphodiesterase, binding, Mn2+ binding, hydrolase; 1.90A {Streptococcus pneumoniae} PDB: 3qfn_A 3qfo_A*
Probab=99.40 E-value=2.1e-12 Score=122.53 Aligned_cols=221 Identities=13% Similarity=0.067 Sum_probs=120.5
Q ss_pred CCCeEEEEEecCCCCCC-hHHHHHHhhcCCCCeEeecCccccCCCChhhHHHHhhhhhhhhcCCCeeecCCCcccCCCCC
Q 012895 145 NFPIEFAIVGDLGQTEW-TNSTLDHVGSKDYDVFLLPGDLSYADFQQPLWDSFGRLVEPYASSRPWMVTEGNHEIESIPI 223 (454)
Q Consensus 145 ~~~~~f~~igD~~~~~~-~~~~l~~i~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~ 223 (454)
..+.|++++||+|.... ..++++.+...++|.|+++||+++.+... ....+.++ ...|++++.||||...
T Consensus 9 ~~~~~i~~iSDiHg~~~~l~~vl~~~~~~~~D~ii~~GDlv~~g~~~---~~~~~~l~---~~~~~~~v~GNhD~~~--- 79 (270)
T 3qfm_A 9 MDMTKIALLSDIHGNTTALEAVLADARQLGVDEYWLLGDILMPGTGR---RRILDLLD---QLPITARVLGNWEDSL--- 79 (270)
T ss_dssp --CEEEEEECCCTTCHHHHHHHHHHHHHTTCCEEEECSCCSSSSSCS---HHHHHHHH---TSCEEEECCCHHHHHH---
T ss_pred ccccEEEEEecCCCCHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCCH---HHHHHHHH---ccCCEEEEcCChHHHH---
Confidence 46799999999996532 23566677777999999999999755432 22233333 3247899999999831
Q ss_pred CCcchhhhhhhhccCCCCCCCCCCCceEEEEeCeEEEEEecccCCCCCCHHHHHHHHHHHHhhccCCCCeEEEEEccccc
Q 012895 224 ILPHAFKAYNARWLMPYEESGSSSNLYYSFDIAGAHIIMLGSYTDFDEDSAQYKWLKADLAKINRKKTPWIFVLLHAPWY 303 (454)
Q Consensus 224 ~~~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~Lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~ 303 (454)
.......+.++.. ...+.. . ...+.......++++||+.........-....|+++|..+.
T Consensus 80 -----~~~~~~~~~~~~~-----~~~~~~----~-----~~~~~~~~L~~~~~~~L~~LP~~~~~~~~g~~i~lvHg~p~ 140 (270)
T 3qfm_A 80 -----WHGVRKELDSTRP-----SQRYLL----R-----QCQYVLEEISLEEIEVLHNQPLQIHRQFGDLTVGISHHLPD 140 (270)
T ss_dssp -----HHHHTTCSCTTSH-----HHHHHH----H-----HHHHHHTTSCHHHHHHHHSCCSEEEEEETTEEEEEESSBTT
T ss_pred -----HHhhccccCCCcH-----HHHHHH----H-----HHHHHHHHcCHHHHHHHHhCCCceEEEECCcEEEEEECCCC
Confidence 0000000000000 000000 0 00011123457899999864332211111246888897654
Q ss_pred cCCCCCCCCcHHHHHHHHHHHHhcCCcEEEecccccceeeecccCCCcCCCCcEEEEECCCCCCCCcccccCCCCCCCce
Q 012895 304 NTNTAHQGEGESMRNSMEELLYNARVDVVFAGHVHAYERFTRIYDNKADPCGPIYITIGDGGNREGLALEFKEPKSPLSM 383 (454)
Q Consensus 304 ~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~y~r~~~~~~~~~~~~g~~yi~~G~gG~~~~~~~~~~~~~p~~~~ 383 (454)
.... .........+.+..++.+.+++++|+||+|....... .++..+|..|+-|.+.. ..+.++
T Consensus 141 ~~~~-~~~~~~~~~~~l~~~~~~~~~d~~i~GHtH~~~~~~~-------~~~~~~iNpGSvg~pr~-----~~~~~~--- 204 (270)
T 3qfm_A 141 KNWG-RELIHTGKQEEFDRLVTHPPCDIAVYGHIHQQLLRYG-------TGGQLIVNPGSIGQPFF-----LDAQLR--- 204 (270)
T ss_dssp BSSS-STTSTTCCHHHHHHTTTTTTCSEEECCSSCSEEEEEC-------TTSCEEEEECCSSSCCC-----SSTTGG---
T ss_pred CCCC-ceecCCCcHHHHHHHhcccCCCEEEECCcCchHheec-------cCCEEEEECCCccCCCC-----CCcccc---
Confidence 3211 1111111235677777788999999999997433221 24788899999886532 111000
Q ss_pred eeecccCEEEEEEecCCeEEEEEEEec
Q 012895 384 FQESSFGHARLKILDETRAHWSWYRNN 410 (454)
Q Consensus 384 ~~~~~~G~~~l~v~~~~~~~~~~~~~~ 410 (454)
......|..|++.+.....++|++..
T Consensus 205 -~~~~asyaild~~~~~~~~v~~~rv~ 230 (270)
T 3qfm_A 205 -KDLRAQYMILEFDDKGLVDMDFRRVD 230 (270)
T ss_dssp -GCCCEEEEEEEEETTEEEEEEEEEEC
T ss_pred -CCCCCEEEEEEecCCCceEEEEEEeC
Confidence 01123678888765433577777653
No 18
>3tho_B Exonuclease, putative; adenosine triphosphate, bacterial proteins, DNA breaks, DOUB stranded, DNA repair, DNA repair enzymes; HET: ADP; 2.61A {Thermotoga maritima} PDB: 3qg5_C
Probab=99.40 E-value=3.1e-12 Score=127.39 Aligned_cols=188 Identities=14% Similarity=0.169 Sum_probs=102.9
Q ss_pred eEEEEEecCCCCCC----h-------------HHHHHHhhcCCCCeEeecCccc-cCCCC-hhhHHHHhhhhhhhhcCCC
Q 012895 148 IEFAIVGDLGQTEW----T-------------NSTLDHVGSKDYDVFLLPGDLS-YADFQ-QPLWDSFGRLVEPYASSRP 208 (454)
Q Consensus 148 ~~f~~igD~~~~~~----~-------------~~~l~~i~~~~pd~vl~~GDl~-y~~~~-~~~~~~~~~~~~~l~~~~P 208 (454)
+||++++|+|.+.. . ..+++.+...+||+||++||++ +.... ...+..+.+.+..+...+|
T Consensus 1 mrilh~SD~Hlg~~~~~~~~g~~~~~~~~~~l~~l~~~~~~~~~D~vliaGDl~hd~~~~~~~~~~~~~~~l~~l~~~~~ 80 (379)
T 3tho_B 1 MKILHTSDWHLGVTSWTSSRPVDRREELKKALDKVVEEAEKREVDLILLTGDLLHSRNNPSVVALHDLLDYLKRMMRTAP 80 (379)
T ss_dssp CEEEEECCCCBTCEECSSSSCEECHHHHHHHHHHHHHHHHHHTCSEEEECSCCBSCSSSCCHHHHHHHHHHHHHHHHHSC
T ss_pred CeEEEEcccCCCCCccccccCcChhHHHHHHHHHHHHHHHhcCCCEEEECCCccccCCCCCHHHHHHHHHHHHHHHhCCC
Confidence 68999999998654 1 2233444578999999999999 54332 2344556666666654489
Q ss_pred eeecCCCcccCCCCCCCcchhhhhhhhccCCCCCCCCCCCceEEEE--eC-eEEEEEecccCCCC----CCHHHHHHHHH
Q 012895 209 WMVTEGNHEIESIPIILPHAFKAYNARWLMPYEESGSSSNLYYSFD--IA-GAHIIMLGSYTDFD----EDSAQYKWLKA 281 (454)
Q Consensus 209 ~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ys~~--~g-~v~fi~Lds~~~~~----~~~~Q~~WL~~ 281 (454)
+++++||||.... .-+..+... ++.+.........+.+. .| .+.|+.+.-..... ....+.+|+.+
T Consensus 81 v~~i~GNHD~~~~-----~~~~~~~~~--~~~~~~~~~~~~~v~l~~~~G~~v~i~glp~~~~~~~~~~~~~~~~~~l~~ 153 (379)
T 3tho_B 81 VVVLPGNQDWKGL-----KLFGNFVTS--ISSDITFVMSFEPVDVEAKRGQKVRILPFPYPDESEALRKNEGDFRFFLES 153 (379)
T ss_dssp EEECCCTTSCTTH-----HHHHHHHHT--TCSSEEECCSSCCEEEECTTCCEEEEEEECCCCCC----CHHHHHHHHHHH
T ss_pred EEEEcCCCccccC-----ccccccccc--cCCcceeecccceEEEEcCCCCEEEEEECCCCCHHHHhhhhccchHHHHHH
Confidence 9999999996310 011111111 11110000001112222 23 47777775322111 13567889998
Q ss_pred HHHhhc---cCCCCeEEEEEccccccCCCCCCCCcHHHHHHHHHHHHhcCCcEEEecccccceee
Q 012895 282 DLAKIN---RKKTPWIFVLLHAPWYNTNTAHQGEGESMRNSMEELLYNARVDVVFAGHVHAYERF 343 (454)
Q Consensus 282 ~L~~~~---~~~~~w~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~y~r~ 343 (454)
.|++.. .....+.|+++|.++.........+. .....+...+...++|++++||+|..+..
T Consensus 154 ~l~~~~~~~~~~~~~~I~l~H~~v~g~~~~~~se~-~~~~~v~~~~~~~~~dyvalGH~H~~q~~ 217 (379)
T 3tho_B 154 RLNKLYEEALKKEDFAIFMGHFTVEGLAGYAGIEQ-GREIIINRALIPSVVDYAALGHIHSFREI 217 (379)
T ss_dssp HHHHHHHHHHTCSSEEEEEEESCBSCCCC--------CSCCBCGGGSCTTSSEEEEESCSSCEEE
T ss_pred HHHHHHHHhcCCCCCeEEEEeccccCCccCCCCcc-ccccccCHHHcCcCCCEEEcccccCCeEe
Confidence 887311 11335689999998754322000000 00011211222457999999999998654
No 19
>1nnw_A Hypothetical protein; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 1.90A {Pyrococcus furiosus} SCOP: d.159.1.5 PDB: 2gju_A
Probab=99.39 E-value=5.6e-13 Score=125.10 Aligned_cols=187 Identities=7% Similarity=-0.017 Sum_probs=102.0
Q ss_pred eEEEEEecCCCCCC-hHHHHHHhh---cC--CCCeEeecCccccCCCChhhHHHHhhhhhhhhcCCCeeecCCCcccCCC
Q 012895 148 IEFAIVGDLGQTEW-TNSTLDHVG---SK--DYDVFLLPGDLSYADFQQPLWDSFGRLVEPYASSRPWMVTEGNHEIESI 221 (454)
Q Consensus 148 ~~f~~igD~~~~~~-~~~~l~~i~---~~--~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~ 221 (454)
+|++++||+|.... ..++++.+. .. ++|+||++||+++.+.... ...+.+..+....|+++++||||....
T Consensus 2 m~i~~isD~H~~~~~l~~~l~~~~~~~~~~~~~d~ii~~GD~~~~g~~~~---~~~~~l~~l~~~~~~~~v~GNhD~~~~ 78 (252)
T 1nnw_A 2 VYVAVLANIAGNLPALTAALSRIEEMREEGYEIEKYYILGNIVGLFPYPK---EVIEVIKDLTKKENVKIIRGKYDQIIA 78 (252)
T ss_dssp CEEEEEECCTTCHHHHHHHHHHHHHHHHTTCCEEEEEEESCSSSSSSCHH---HHHHHHHHHHHHSCEEEECCHHHHHHH
T ss_pred cEEEEEeecCCCHHHHHHHHHHHHhhhhccCCCCEEEEeCccCCCCCCHH---HHHHHHHhhHhhcCeeEEecchHHHhh
Confidence 68999999997532 234556665 55 8999999999997554322 223344444433689999999997311
Q ss_pred CCCCcchhhhhhhhccCCCCCCCCCCCceEEEEeCeEEEEEecc--cCCCCCCHHHHHHHHHHHHhhccCCCCeEEEEEc
Q 012895 222 PIILPHAFKAYNARWLMPYEESGSSSNLYYSFDIAGAHIIMLGS--YTDFDEDSAQYKWLKADLAKINRKKTPWIFVLLH 299 (454)
Q Consensus 222 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~Lds--~~~~~~~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H 299 (454)
.+...+. ... .. ..++..... ... +.......+|++||++........-....|+++|
T Consensus 79 ---------~~~~~~~-~~~------~~-~~~~~~~~~---~~~~~~~~~~l~~~~~~~L~~lp~~~~~~~~~~~i~~~H 138 (252)
T 1nnw_A 79 ---------MSDPHAT-DPG------YI-DKLELPGHV---KKALKFTWEKLGHEGREYLRDLPIYLVDKIGGNEVFGVY 138 (252)
T ss_dssp ---------HSCTTCS-SSG------GG-GGSSCCHHH---HHHHHHHHHHHHHHHHHHHHTSCSCEEEEETTEEEEEES
T ss_pred ---------ccccccC-Ccc------cc-cchhhhHHH---HHHHHHHHHHCCHHHHHHHHhCCceEEEeeCCcEEEEEc
Confidence 0000000 000 00 000000000 000 0000123578888876332221100123788999
Q ss_pred cccccCCCCCCCCcHHHHHHHHHHHHhc-CCcEEEecccccceeeecccCCCcCCCCcEEEEECCCCC
Q 012895 300 APWYNTNTAHQGEGESMRNSMEELLYNA-RVDVVFAGHVHAYERFTRIYDNKADPCGPIYITIGDGGN 366 (454)
Q Consensus 300 ~P~~~~~~~~~~~~~~~~~~l~~ll~~~-~v~lvl~GH~H~y~r~~~~~~~~~~~~g~~yi~~G~gG~ 366 (454)
++++...... .......+.+..++.++ +++++++||+|...... .+++++|..|+-|.
T Consensus 139 ~~p~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~vi~GHtH~~~~~~--------~~~~~~in~Gs~~~ 197 (252)
T 1nnw_A 139 GSPINPFDGE-VLAEQPTSYYEAIMRPVKDYEMLIVASPMYPVDAM--------TRYGRVVCPGSVGF 197 (252)
T ss_dssp SCSSCTTTCC-CCSSCCHHHHHHHHGGGTTSSEEEESTTCSEEEEE--------ETTEEEEEECCSSS
T ss_pred CCCCCCcccc-cCCCCCHHHHHHHHhcCCCCCEEEECCccccceEe--------cCCeEEEECCCccC
Confidence 8874322111 11111235677888888 99999999999854432 13678888887664
No 20
>3ck2_A Conserved uncharacterized protein (predicted phosphoesterase COG0622); structural genomics, predicted phosphodiesterase, PSI-2; HET: SRT; 2.30A {Streptococcus pneumoniae} SCOP: d.159.1.7
Probab=99.37 E-value=2.5e-11 Score=107.49 Aligned_cols=159 Identities=14% Similarity=0.157 Sum_probs=100.9
Q ss_pred CeEEEEEecCCCCCC-hHHHHHHhhcCCCCeEeecCccccCCCChhhHHHHhhhhhhhhcCCCeeecCCCcccCCCCCCC
Q 012895 147 PIEFAIVGDLGQTEW-TNSTLDHVGSKDYDVFLLPGDLSYADFQQPLWDSFGRLVEPYASSRPWMVTEGNHEIESIPIIL 225 (454)
Q Consensus 147 ~~~f~~igD~~~~~~-~~~~l~~i~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~~~ 225 (454)
.+|++++||+|.... ..++++.+.. ++|+|+++||+.+ +.++.+. .|+++++||||...
T Consensus 6 ~m~i~~isD~H~~~~~~~~~~~~~~~-~~d~i~~~GD~~~------------~~l~~l~--~~~~~v~GNhD~~~----- 65 (176)
T 3ck2_A 6 KQTIIVMSDSHGDSLIVEEVRDRYVG-KVDAVFHNGDSEL------------RPDSPLW--EGIRVVKGNMDFYA----- 65 (176)
T ss_dssp CEEEEEECCCTTCHHHHHHHHHHHTT-TSSEEEECSCCCS------------CTTCGGG--TTEEECCCTTCCST-----
T ss_pred CcEEEEEecCCCCHHHHHHHHHHhhc-CCCEEEECCCCch------------HHHHhhh--CCeEEecCcccchh-----
Confidence 489999999995421 1234455544 8999999999842 1223333 28999999999731
Q ss_pred cchhhhhhhhccCCCCCCCCCCCceEEEEeCeEEEEEecccCCCCCCHHHHHHHHHHHHhhccCCCCeEEEEEccccccC
Q 012895 226 PHAFKAYNARWLMPYEESGSSSNLYYSFDIAGAHIIMLGSYTDFDEDSAQYKWLKADLAKINRKKTPWIFVLLHAPWYNT 305 (454)
Q Consensus 226 ~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~Lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~ 305 (454)
.+|. .. .+.+ ..++|+++|.|++..
T Consensus 66 -----------~~p~---------~~--------~~~~---------------------------~~~~i~~~Hg~~~~~ 90 (176)
T 3ck2_A 66 -----------GYPE---------RL--------VTEL---------------------------GSTKIIQTHGHLFDI 90 (176)
T ss_dssp -----------TCCS---------EE--------EEEE---------------------------TTEEEEEECSGGGTT
T ss_pred -----------cCCc---------EE--------EEEE---------------------------CCeEEEEECCCccCC
Confidence 1121 00 0000 013789999988753
Q ss_pred CCCCCCCcHHHHHHHHHHHHhcCCcEEEecccccceeeecccCCCcCCCCcEEEEECCCCCCCCcccccCCCCCCCceee
Q 012895 306 NTAHQGEGESMRNSMEELLYNARVDVVFAGHVHAYERFTRIYDNKADPCGPIYITIGDGGNREGLALEFKEPKSPLSMFQ 385 (454)
Q Consensus 306 ~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~y~r~~~~~~~~~~~~g~~yi~~G~gG~~~~~~~~~~~~~p~~~~~~ 385 (454)
.. ..+.+.+++.+.+++++++||+|...... .+++.++..|+.|.+. +..|
T Consensus 91 ~~--------~~~~l~~~~~~~~~d~vi~GHtH~~~~~~--------~~~~~~inpGs~~~~~-------~~~~------ 141 (176)
T 3ck2_A 91 NF--------NFQKLDYWAQEEEAAICLYGHLHVPSAWL--------EGKILFLNPGSISQPR-------GTIR------ 141 (176)
T ss_dssp TT--------CSHHHHHHHHHTTCSEEECCSSCCEEEEE--------ETTEEEEEECCSSSCC-------TTCC------
T ss_pred CC--------CHHHHHHHHHhcCCCEEEECCcCCCCcEE--------ECCEEEEECCCCCcCC-------CCCC------
Confidence 21 11456777788999999999999855432 1467788888765421 1111
Q ss_pred ecccCEEEEEEecCCeEEEEEEEecCCC
Q 012895 386 ESSFGHARLKILDETRAHWSWYRNNDSD 413 (454)
Q Consensus 386 ~~~~G~~~l~v~~~~~~~~~~~~~~dg~ 413 (454)
..+|..+++. ...+.+++++. +|+
T Consensus 142 --~~~y~il~~~-~~~~~v~~~~~-~~~ 165 (176)
T 3ck2_A 142 --ECLYARVEID-DSYFKVDFLTR-DHE 165 (176)
T ss_dssp --SCCEEEEEEC-SSEEEEEEECT-TSC
T ss_pred --CCeEEEEEEc-CCEEEEEEEEE-CCE
Confidence 2478888874 45788888875 454
No 21
>1xm7_A Hypothetical protein AQ_1665; structural genomics, protein structure initi midwest center for structural genomics, PSI, MCSG, unknown; 2.40A {Aquifex aeolicus} SCOP: d.159.1.8
Probab=99.27 E-value=3.4e-11 Score=108.44 Aligned_cols=137 Identities=15% Similarity=0.182 Sum_probs=84.5
Q ss_pred CeEEEEEecCCCCCCh--------------HHHHHHhhc--CCCCeEeecCccccCCCChhhHHHHhhhhhhhhcCCCee
Q 012895 147 PIEFAIVGDLGQTEWT--------------NSTLDHVGS--KDYDVFLLPGDLSYADFQQPLWDSFGRLVEPYASSRPWM 210 (454)
Q Consensus 147 ~~~f~~igD~~~~~~~--------------~~~l~~i~~--~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~~~P~~ 210 (454)
.+|++++||+|.+... ..+++.+++ .++|+|+++||+++.+ ..+..+.+.++.+. .|++
T Consensus 1 ~~~i~~iSD~H~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~vi~~GDl~~~~---~~~~~~~~~l~~l~--~~~~ 75 (195)
T 1xm7_A 1 NAMMYFISDTHFYHENIINLNPEVRFKGFEIVILTNLLKVLKPEDTLYHLGDFTWHF---NDKNEYLRIWKALP--GRKI 75 (195)
T ss_dssp CCCEEEEBCCCBTCTTHHHHSTTTCCTTHHHHHHHHHHTTCCTTCEEEECSCCBSCS---CCTTSHHHHHHHSS--SEEE
T ss_pred CcEEEEEeccccCCCccccccCCCCHHHHHHHHHHHHHHhCCCCCEEEECCCCCCCc---hhHHHHHHHHHHCC--CCEE
Confidence 3689999999975432 123344443 5899999999999754 12233444455443 5899
Q ss_pred ecCCCcccCCCCCCCcchhhhhhhhccCCCCCCCCCCCceEEEEeCeEEEEEecccCCCCCCHHHHHHHHHHHHhhccCC
Q 012895 211 VTEGNHEIESIPIILPHAFKAYNARWLMPYEESGSSSNLYYSFDIAGAHIIMLGSYTDFDEDSAQYKWLKADLAKINRKK 290 (454)
Q Consensus 211 ~v~GNHD~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~Lds~~~~~~~~~Q~~WL~~~L~~~~~~~ 290 (454)
+++||||... ..+...|. . +. +..||+ +. .
T Consensus 76 ~v~GNhD~~~---------~~~~~~~~--------------~----------l~----------~~~~l~----~~---~ 105 (195)
T 1xm7_A 76 LVMGNHDKDK---------ESLKEYFD--------------E----------IY----------DFYKII----EH---K 105 (195)
T ss_dssp EECCTTCCCH---------HHHTTTCS--------------E----------EE----------SSEEEE----EE---T
T ss_pred EEeCCCCCch---------hhhhhhhh--------------c----------hh----------HHHHHH----hc---C
Confidence 9999999831 11211110 0 00 111221 01 1
Q ss_pred CCeEEEEEccccccCCCCCCCCcHHHHHHHHHHHHhcCCcEEEeccccccee
Q 012895 291 TPWIFVLLHAPWYNTNTAHQGEGESMRNSMEELLYNARVDVVFAGHVHAYER 342 (454)
Q Consensus 291 ~~w~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~y~r 342 (454)
.++|+++|+|++....... ....+.+.+++.+++++++++||+|....
T Consensus 106 -~~~i~~~H~~~~~~~~~~~---~~~~~~l~~~~~~~~~~~vi~GHtH~~~~ 153 (195)
T 1xm7_A 106 -GKRILLSHYPAKDPITERY---PDRQEMVREIYFKENCDLLIHGHVHWNRE 153 (195)
T ss_dssp -TEEEEEESSCSSCSSCCSC---HHHHHHHHHHHHHTTCSEEEECCCCCCSC
T ss_pred -CcEEEEEccCCcCCCcccc---cchHHHHHHHHHHcCCcEEEECCcCCCCc
Confidence 2479999999876543221 13457888889999999999999998544
No 22
>3rqz_A Metallophosphoesterase; PSI-biology, midwest center for structural genomics, MCSG, Zn binding, hydrolase; 1.95A {Sphaerobacter thermophilus} SCOP: d.159.1.0
Probab=99.23 E-value=2.6e-11 Score=113.38 Aligned_cols=152 Identities=14% Similarity=0.137 Sum_probs=87.2
Q ss_pred CCeEEEEEecCCCCCCh-HHHHHHhhcCCCCeEeecCccccCCCChhhHHHHhhhhhhhhcCCCeeecCCCcccCCCCCC
Q 012895 146 FPIEFAIVGDLGQTEWT-NSTLDHVGSKDYDVFLLPGDLSYADFQQPLWDSFGRLVEPYASSRPWMVTEGNHEIESIPII 224 (454)
Q Consensus 146 ~~~~f~~igD~~~~~~~-~~~l~~i~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~~ 224 (454)
..+|++++||+|..... .++++.+. ++|.++++||+++.+.... ...+.+..+ .+++++.||||.......
T Consensus 2 ~~mri~~isDiHg~~~~l~~~l~~~~--~~d~ii~~GDl~~~g~~~~---~~~~~l~~~---~~~~~v~GNhD~~~~~~~ 73 (246)
T 3rqz_A 2 NAMRILIISDVHANLVALEAVLSDAG--RVDDIWSLGDIVGYGPRPR---ECVELVRVL---APNISVIGNHDWACIGRL 73 (246)
T ss_dssp CCCCEEEECCCTTCHHHHHHHHHHHC--SCSEEEECSCCSSSSSCHH---HHHHHHHHH---CSSEECCCHHHHHHTCCC
T ss_pred CCcEEEEEeecCCCHHHHHHHHHhcc--CCCEEEECCCcCCCCCCHH---HHHHHHHhc---CCCEEEeCchHHHHhccC
Confidence 46899999999954321 23445554 9999999999997554322 223333333 236899999998421110
Q ss_pred CcchhhhhhhhccCCCCCCCCCCCceEEEEeCeEEEEEecccCCCCCCHHHHHHHHHHHHhhccCCCCeEEEEEcccccc
Q 012895 225 LPHAFKAYNARWLMPYEESGSSSNLYYSFDIAGAHIIMLGSYTDFDEDSAQYKWLKADLAKINRKKTPWIFVLLHAPWYN 304 (454)
Q Consensus 225 ~~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~Lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~~ 304 (454)
.. . .+. .. .... +. +.......++++||++....... . .|+++|.++..
T Consensus 74 ~~---~----~~~-~~------~~~~------------~~-~~~~~l~~~~~~~L~~lp~~~~~-~---~i~~~Hg~p~~ 122 (246)
T 3rqz_A 74 SL---D----EFN-PV------ARFA------------SY-WTTMQLQAEHLQYLESLPNRMID-G---DWTVVHGSPRH 122 (246)
T ss_dssp CC---C------C-GG------GGCH------------HH-HHHHHCCHHHHHHHHHCCSEEEE-T---TEEEESSCSSS
T ss_pred Cc---c----ccC-HH------HHHH------------HH-HHHHHcCHHHHHHHHhCCcEEEE-C---CEEEEECCcCC
Confidence 00 0 000 00 0000 00 00012357889999864333322 1 47888987765
Q ss_pred CCCCCCCCcHHHHHHHHHHHHhcCCcEEEecccccc
Q 012895 305 TNTAHQGEGESMRNSMEELLYNARVDVVFAGHVHAY 340 (454)
Q Consensus 305 ~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~y 340 (454)
..... ... ...+.++|.+++++++|+||+|..
T Consensus 123 ~~~~~-~~~---~~~~~~~l~~~~~~l~i~GHtH~p 154 (246)
T 3rqz_A 123 PIWEY-IYN---ARIAALNFPAFDTPLCFVGHTHVP 154 (246)
T ss_dssp TTTCC-CCS---HHHHHHHGGGCCSSEEECCSSSSE
T ss_pred ccccc-cCC---hHHHHHHHhccCCCEEEECCcCcc
Confidence 43111 111 256777889999999999999973
No 23
>2kkn_A Uncharacterized protein; protein phosphatase 2A homologue, structural genomics, PSI- 2, protein structure initiative; NMR {Thermotoga maritima}
Probab=99.21 E-value=4.8e-10 Score=99.32 Aligned_cols=62 Identities=18% Similarity=0.162 Sum_probs=43.8
Q ss_pred CCeEEEEEecCCCCC---ChHHHHHHhhcCCCCeEeecCccccCCCChhhHHHHhhhhhhhhcCCCeeecCCCccc
Q 012895 146 FPIEFAIVGDLGQTE---WTNSTLDHVGSKDYDVFLLPGDLSYADFQQPLWDSFGRLVEPYASSRPWMVTEGNHEI 218 (454)
Q Consensus 146 ~~~~f~~igD~~~~~---~~~~~l~~i~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~ 218 (454)
.-+|++++||+|... ...+.++.+. .++|+|+++||+++. ...+.++.+. .|+++++||||.
T Consensus 21 ~mmri~~iSD~Hg~~~~~~l~~~l~~~~-~~~D~ii~~GD~~~~--------~~~~~l~~~~--~~v~~V~GNhD~ 85 (178)
T 2kkn_A 21 GVKRFLLISDSHVPVRMASLPDEILNSL-KEYDGVIGLGDYVDL--------DTVILLEKFS--KEFYGVHGNMDY 85 (178)
T ss_dssp -CEEEEEECCCCBTTTTCCCCHHHHHGG-GGCSEEEESSCBSCH--------HHHHHHHHHT--SSEEECCCSSSC
T ss_pred cceEEEEEecccCCCCHHHHHHHHHHHh-cCCCEEEECCCCCCH--------HHHHHHHhcC--CCEEEEECCCCc
Confidence 348999999999422 2345566654 789999999999851 2233334332 699999999997
No 24
>1ii7_A MRE11 nuclease; RAD50, DNA double-strand break repair, DAMP, manganese, replication; HET: DA; 2.20A {Pyrococcus furiosus} SCOP: d.159.1.4 PDB: 3dsc_A* 3dsd_A* 1s8e_A
Probab=99.20 E-value=7.6e-11 Score=115.29 Aligned_cols=72 Identities=22% Similarity=0.253 Sum_probs=53.5
Q ss_pred eEEEEEecCCCCCCh--------------HHHHHHhhcCCCCeEeecCccccCCCC-hhhHHHHhhhhhhhhc-CCCeee
Q 012895 148 IEFAIVGDLGQTEWT--------------NSTLDHVGSKDYDVFLLPGDLSYADFQ-QPLWDSFGRLVEPYAS-SRPWMV 211 (454)
Q Consensus 148 ~~f~~igD~~~~~~~--------------~~~l~~i~~~~pd~vl~~GDl~y~~~~-~~~~~~~~~~~~~l~~-~~P~~~ 211 (454)
+||++++|+|.+... .++++.+.+.+||+||++||+++.... ...+..+.+.++.+.. .+|+++
T Consensus 1 mkilh~sD~Hlg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vl~~GDl~d~~~~~~~~~~~~~~~l~~l~~~~~~v~~ 80 (333)
T 1ii7_A 1 MKFAHLADIHLGYEQFHKPQREEEFAEAFKNALEIAVQENVDFILIAGDLFHSSRPSPGTLKKAIALLQIPKEHSIPVFA 80 (333)
T ss_dssp CEEEEECCCCBTCCGGGCHHHHHHHHHHHHHHHHHHHHTTCSEEEEESCSBSSSSCCHHHHHHHHHHHHHHHTTTCCEEE
T ss_pred CEEEEEcccCCCCcccCCchhhHHHHHHHHHHHHHHHhcCCCEEEECCCcCCCCCCCHHHHHHHHHHHHHHHHCCCcEEE
Confidence 689999999987531 234445567899999999999976433 2344556667777754 489999
Q ss_pred cCCCcccC
Q 012895 212 TEGNHEIE 219 (454)
Q Consensus 212 v~GNHD~~ 219 (454)
++||||..
T Consensus 81 v~GNHD~~ 88 (333)
T 1ii7_A 81 IEGNHDRT 88 (333)
T ss_dssp ECCTTTCC
T ss_pred eCCcCCCc
Confidence 99999985
No 25
>1s3l_A Hypothetical protein MJ0936; phosphodiesterase, nuclease, structural genomics, BSGC struc funded by NIH; 2.40A {Methanocaldococcus jannaschii} SCOP: d.159.1.7 PDB: 1s3m_A 1s3n_A 2ahd_A
Probab=99.18 E-value=9e-11 Score=105.21 Aligned_cols=63 Identities=14% Similarity=0.164 Sum_probs=44.5
Q ss_pred CeEEEEEecCCCCCC-hHHHHHHhhcCCCCeEeecCccccCCCChhhHHHHhhhhhhhhcCCCeeecCCCcccC
Q 012895 147 PIEFAIVGDLGQTEW-TNSTLDHVGSKDYDVFLLPGDLSYADFQQPLWDSFGRLVEPYASSRPWMVTEGNHEIE 219 (454)
Q Consensus 147 ~~~f~~igD~~~~~~-~~~~l~~i~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~ 219 (454)
.+|++++||+|.... ..++++.+...++|+|+++||+++. ...+.++.+ ..|+++++||||..
T Consensus 25 ~m~i~~iSD~Hg~~~~l~~~l~~~~~~~~D~ii~~GDl~~~--------~~~~~l~~l--~~~~~~V~GNhD~~ 88 (190)
T 1s3l_A 25 HMKIGIMSDTHDHLPNIRKAIEIFNDENVETVIHCGDFVSL--------FVIKEFENL--NANIIATYGNNDGE 88 (190)
T ss_dssp -CEEEEECCCTTCHHHHHHHHHHHHHSCCSEEEECSCCCST--------HHHHHGGGC--SSEEEEECCTTCCC
T ss_pred CeEEEEEeeCCCCHHHHHHHHHHHhhcCCCEEEECCCCCCH--------HHHHHHHhc--CCCEEEEeCCCcch
Confidence 499999999995321 1345566666899999999999852 122333332 37999999999983
No 26
>3t1i_A Double-strand break repair protein MRE11A; DNA repair, MRN complex, metallophosphatase, exonuclease, endonuclease, RAD50, NBS1, hydrolase; 3.00A {Homo sapiens}
Probab=99.17 E-value=2.7e-09 Score=106.76 Aligned_cols=243 Identities=12% Similarity=0.085 Sum_probs=127.3
Q ss_pred CCCCCCeEEEEEecCCCCCCh-------------HHHHHHhhcCCCCeEeecCccccCCCC-hhhHHHHhhhhhhhh---
Q 012895 142 PPANFPIEFAIVGDLGQTEWT-------------NSTLDHVGSKDYDVFLLPGDLSYADFQ-QPLWDSFGRLVEPYA--- 204 (454)
Q Consensus 142 ~p~~~~~~f~~igD~~~~~~~-------------~~~l~~i~~~~pd~vl~~GDl~y~~~~-~~~~~~~~~~~~~l~--- 204 (454)
++....+||++++|+|.+... ..+++.+.+.+||+||++||+++.... ......+.+.++++.
T Consensus 27 ~~~~~~mrilhiSDlHLg~~~~~~~~~~d~~~~l~~ll~~~~~~~~D~VliaGDlfd~~~~~~~~~~~~~~~L~r~~~~~ 106 (431)
T 3t1i_A 27 LDDENTFKILVATDIHLGFMEKDAVRGNDTFVTLDEILRLAQENEVDFILLGGDLFHENKPSRKTLHTCLELLRKYCMGD 106 (431)
T ss_dssp CCGGGEEEEEEECCCCBTTTSSCTTTTTHHHHHHHHHHHHHHHTTCSEEEECSCCBSSSSCCHHHHHHHHHHHHHHHBCS
T ss_pred CCCCCCEEEEEEeccCCCCcccccchhhhHHHHHHHHHHHHhhcCCCEEEEcCccccCCCCCHHHHHHHHHHHHHHhccC
Confidence 334678999999999986431 234555668899999999999976554 233344455555432
Q ss_pred -------------------------------cCCCeeecCCCcccCCCCCCCcchhhhhh------hhccCCCCCCCCCC
Q 012895 205 -------------------------------SSRPWMVTEGNHEIESIPIILPHAFKAYN------ARWLMPYEESGSSS 247 (454)
Q Consensus 205 -------------------------------~~~P~~~v~GNHD~~~~~~~~~~~~~~~~------~~~~~p~~~~~~~~ 247 (454)
..+|++++.||||....... ..+..+. ..|.... ...
T Consensus 107 ~~~~~~~lsd~~~~~~~~~~~~~ny~d~n~~~~ipV~~I~GNHD~~~g~~~--l~~~~lL~~~glv~~fg~~~----~~e 180 (431)
T 3t1i_A 107 RPVQFEILSDQSVNFGFSKFPWVNYQDGNLNISIPVFSIHGNHDDPTGADA--LCALDILSCAGFVNHFGRSM----SVE 180 (431)
T ss_dssp SCCCCEECSCC------------------CCBCSCEEECCCSSSCCBTTTT--BCHHHHHHHHTSEEECCCCC----CSS
T ss_pred CcccceeccchhhccccccccccccccccccCCCcEEEEccCCCCcccccc--cCHHHHhccCCcEEEECCcC----ccc
Confidence 25999999999998532110 0111111 1121110 000
Q ss_pred Cc---eEEEEeCe--EEEEEecccCCCCCCHHHHHHHHHHHHh-----hcc---CCCCeEEEEEccccccCCCCCCCCcH
Q 012895 248 NL---YYSFDIAG--AHIIMLGSYTDFDEDSAQYKWLKADLAK-----INR---KKTPWIFVLLHAPWYNTNTAHQGEGE 314 (454)
Q Consensus 248 ~~---~ys~~~g~--v~fi~Lds~~~~~~~~~Q~~WL~~~L~~-----~~~---~~~~w~Iv~~H~P~~~~~~~~~~~~~ 314 (454)
.. ...+.-|+ +.+.++.. . ..+ .+.+.+.. ... ....+.|++.|......+....
T Consensus 181 ~i~~~Pv~l~~g~~~valyGl~~----~-~~~---~l~~~~~~~~v~~~~p~~~~~~~~~Ilv~H~~~~~~g~~~~---- 248 (431)
T 3t1i_A 181 KIDISPVLLQKGSTKIALYGLGS----I-PDE---RLYRMFVNKKVTMLRPKEDENSWFNLFVIHQNRSKHGSTNF---- 248 (431)
T ss_dssp CEEECCEEEEETTEEEEEEEECC----C-CHH---HHHHHHHTTCEEECCCSSCGGGEEEEEEECSCCSCSSSSSS----
T ss_pred ceeeEEEEEecCCEeEEEEeCCC----C-CHH---HHhhhhccccceeecccccCCCceEEEEECCCccCCCcccc----
Confidence 10 11233343 66666642 1 122 23333221 111 1223689999987632211110
Q ss_pred HHHHHHHHHHHhcCCcEEEecccccceeeecccCCCcCCCCcEEEEECCCCCCCCcccccCCCCCCCceeeecccCEEEE
Q 012895 315 SMRNSMEELLYNARVDVVFAGHVHAYERFTRIYDNKADPCGPIYITIGDGGNREGLALEFKEPKSPLSMFQESSFGHARL 394 (454)
Q Consensus 315 ~~~~~l~~ll~~~~v~lvl~GH~H~y~r~~~~~~~~~~~~g~~yi~~G~gG~~~~~~~~~~~~~p~~~~~~~~~~G~~~l 394 (454)
+.+ -+...++|+++.||+|..+...... ...++..+-.|+-.. . .+.. -....-|+..|
T Consensus 249 -ip~----~l~~~~~Dyv~lGH~H~~~~~~~~~----~~~~~~i~yPGS~~~---~--s~~e-------~E~~~k~~~lv 307 (431)
T 3t1i_A 249 -IPE----QFLDDFIDLVIWGHEHECKIAPTKN----EQQLFYISQPGSSVV---T--SLSP-------GEAVKKHVGLL 307 (431)
T ss_dssp -CCG----GGSCTTCCEEEECSCCSCEEEEEEC----TTTCCEEEECCCSSC---C--SCCH-------HHHSCCEEEEE
T ss_pred -CCH----hHhhCCCCEEEeccccccccccccc----CCCCEEEEeCCCCcc---c--CcCc-------ccCCCCEEEEE
Confidence 111 1234579999999999976543111 012444343343211 1 1110 00123388899
Q ss_pred EEecCCeEEEEEEEecCCCceeeeEEEEEE
Q 012895 395 KILDETRAHWSWYRNNDSDAVIADEVRLES 424 (454)
Q Consensus 395 ~v~~~~~~~~~~~~~~dg~~~~~D~~~i~~ 424 (454)
++.+ ..+.++++..+.-..-+..++.+..
T Consensus 308 ei~~-~~~~ve~i~l~~~R~f~~~~v~l~~ 336 (431)
T 3t1i_A 308 RIKG-RKMNMHKIPLHTVRQFFMEDIVLAN 336 (431)
T ss_dssp EEET-TEEEEEEEECSSSCCEEEEEEEGGG
T ss_pred EEEC-CEEEEEEEECCCcceEEEEEEEEec
Confidence 9864 5788999987655544555555543
No 27
>4fbk_A DNA repair and telomere maintenance protein NBS1, protein RAD32 chimeric protein; DNA double-strand break repair, nuclease; HET: DNA; 2.38A {Schizosaccharomyces pombe} PDB: 4fbq_A*
Probab=99.17 E-value=1.8e-09 Score=108.38 Aligned_cols=244 Identities=14% Similarity=0.058 Sum_probs=123.9
Q ss_pred CCCCeEEEEEecCCCCCCh-------------HHHHHHhhcCCCCeEeecCccccCCCChh-hHHHHhhhhhh-------
Q 012895 144 ANFPIEFAIVGDLGQTEWT-------------NSTLDHVGSKDYDVFLLPGDLSYADFQQP-LWDSFGRLVEP------- 202 (454)
Q Consensus 144 ~~~~~~f~~igD~~~~~~~-------------~~~l~~i~~~~pd~vl~~GDl~y~~~~~~-~~~~~~~~~~~------- 202 (454)
....+||++++|+|.+... .++++.+.+.+||+||++||+++...... ....+.+.+++
T Consensus 73 ~~~~mrilhiSDlHLG~~~~~~~~~~d~~~~l~~lv~~~~~~~~D~VliaGDLfd~~~ps~~a~~~~~~~Lr~~~~g~~~ 152 (472)
T 4fbk_A 73 SENTIRILISSDPHVGYGEKDPVRGNDSFVSFNEILEIARERDVDMILLGGDIFHDNKPSRKALYQALRSLRLNCLGDKP 152 (472)
T ss_dssp CTTCEEEEEECCCCBTTTTTCTTTTTHHHHHHHHHHHHHHHTTCSEEEECSCSBSSSSCCHHHHHHHHHHHHHHHBSSCC
T ss_pred CCCCeEEEEEecccCCCcccCcccchhHHHHHHHHHHHHHhcCCCEEEEcCccccCCCCCHHHHHHHHHHHHHhcccCCc
Confidence 3678999999999986431 24556666899999999999998665522 12222232222
Q ss_pred -----h----------------------hcCCCeeecCCCcccCCCCCCCcchhhhhhh------hccCCCCCCCCCCCc
Q 012895 203 -----Y----------------------ASSRPWMVTEGNHEIESIPIILPHAFKAYNA------RWLMPYEESGSSSNL 249 (454)
Q Consensus 203 -----l----------------------~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~------~~~~p~~~~~~~~~~ 249 (454)
| ...+|+|++.||||....... ........ .+.... ..++.
T Consensus 153 ~~~e~L~d~~~~~~~~~~~~vn~~dp~~~~gIpVf~I~GNHD~~~~~~~--~s~~~LL~~~g~v~l~g~~~----~~d~i 226 (472)
T 4fbk_A 153 CELELLSDTSLTTGDTAVCNINYLDPNINVAIPVFSIHGNHDDPSGDGR--YSALDILQVTGLVNYFGRVP----ENDNI 226 (472)
T ss_dssp CCCEEEEEC-----CCCSCSSSTTCTTBCBSSCEEECCCCCCSCCC--C--CCHHHHHHHTTSCEECCCCS----CSSSE
T ss_pred chheecchhhhhcccccccccccccccccCCCcEEEEecCCCCcccccc--ccHHHHhccCCcEEEeCCcc----cCCce
Confidence 1 125899999999998532210 00111111 111100 00010
Q ss_pred ---eEEEEeCe--EEEEEecccCCCCCCHHHH-HHHHHHHHh-hcc---CCCCeEEEEEccccccCCCCCCCCcHHHHHH
Q 012895 250 ---YYSFDIAG--AHIIMLGSYTDFDEDSAQY-KWLKADLAK-INR---KKTPWIFVLLHAPWYNTNTAHQGEGESMRNS 319 (454)
Q Consensus 250 ---~ys~~~g~--v~fi~Lds~~~~~~~~~Q~-~WL~~~L~~-~~~---~~~~w~Iv~~H~P~~~~~~~~~~~~~~~~~~ 319 (454)
-..+..|+ +.+.++.-. . .+.+ .++.+.... ... ....+.|++.|........... ..+.
T Consensus 227 ~~~pv~l~kg~~~valyGl~y~----~-d~rl~r~~~e~~v~~~~p~~~~~~~~nIlvlH~~~~~~~~~~y-----ipe~ 296 (472)
T 4fbk_A 227 VVSPILLQKGFTKLALYGISNV----R-DERLYHSFRENKVKFLRPDLYRDEWFNLLTVHQNHSAHTPTSY-----LPES 296 (472)
T ss_dssp EECCEEEEETTEEEEEEECCCC----C-HHHHHHHHHTTCEEEEEESTTGGGEEEEEEEESCSCCSSTTSS-----CCGG
T ss_pred eEEEEEEEeCCceEEEEecCCC----c-hhhhhhhhhhhhhhhhCcccccCCceEEEEecCCccCCCcccc-----CChh
Confidence 11233443 555555321 1 2221 222221111 111 1233689999987654321110 0011
Q ss_pred HHHHHHhcCCcEEEecccccceeeecccCCCcCCCCcEEEEECCCCCCCCcccccCCCCCCCceeeecccCEEEEEEecC
Q 012895 320 MEELLYNARVDVVFAGHVHAYERFTRIYDNKADPCGPIYITIGDGGNREGLALEFKEPKSPLSMFQESSFGHARLKILDE 399 (454)
Q Consensus 320 l~~ll~~~~v~lvl~GH~H~y~r~~~~~~~~~~~~g~~yi~~G~gG~~~~~~~~~~~~~p~~~~~~~~~~G~~~l~v~~~ 399 (454)
+...++|+|+.||+|..+...... ..++...+..|+-. +. .+... + ...-|+..|++.+
T Consensus 297 ----ll~~g~DyValGH~H~~~~~~~~~----~~~g~~ivyPGS~~---~~--s~~e~--E-----~~~kg~~lveI~~- 355 (472)
T 4fbk_A 297 ----FIQDFYDFVLWGHEHECLIDGSYN----PTQKFTVVQPGSTI---AT--SLSPG--E-----TAPKHCGILNITG- 355 (472)
T ss_dssp ----GSCTTCSEEEEESCCSCEEEEEEE----TTTTEEEEECCCSS---CS--SCCGG--G-----CSCCEEEEEEEET-
T ss_pred ----hhhcCCCEEEecCcccceeeeccc----CCCCeEEEECCCcc---cc--ccCcc--C-----CCCCEEEEEEEEC-
Confidence 234579999999999966542100 01233333334321 11 11100 0 0234888999854
Q ss_pred CeEEEEEEEecCCCceeeeEEEEEE
Q 012895 400 TRAHWSWYRNNDSDAVIADEVRLES 424 (454)
Q Consensus 400 ~~~~~~~~~~~dg~~~~~D~~~i~~ 424 (454)
..+.++++..+.-..-+..++.+..
T Consensus 356 ~~v~ve~I~L~t~Rpf~~~~i~L~~ 380 (472)
T 4fbk_A 356 KDFHLEKIRLRTVRPFIMKDIILSE 380 (472)
T ss_dssp TEEEEEEEECSSSCCEEEEEEEGGG
T ss_pred CEEEEEEEECCCcccEEEEEEEEec
Confidence 5788999987665545555655543
No 28
>4fbw_A DNA repair protein RAD32; DNA double-strand break repair, nuclease, hydrolase; HET: DNA; 2.20A {Schizosaccharomyces pombe} PDB: 4fcx_B*
Probab=99.16 E-value=1.5e-09 Score=108.18 Aligned_cols=246 Identities=13% Similarity=0.053 Sum_probs=123.8
Q ss_pred CCCCeEEEEEecCCCCCCh-------------HHHHHHhhcCCCCeEeecCccccCCCChh-hHHHHhhhhhh-------
Q 012895 144 ANFPIEFAIVGDLGQTEWT-------------NSTLDHVGSKDYDVFLLPGDLSYADFQQP-LWDSFGRLVEP------- 202 (454)
Q Consensus 144 ~~~~~~f~~igD~~~~~~~-------------~~~l~~i~~~~pd~vl~~GDl~y~~~~~~-~~~~~~~~~~~------- 202 (454)
....+||++++|+|.+... .++++.+.+.+||+||++||+++...... ....+.+.+++
T Consensus 10 ~~~~mrilhiSDlHLg~~~~~~~~~~d~~~~l~~lv~~~~~~~~D~VliaGDLfd~~~p~~~~~~~~~~~lr~~~~g~~~ 89 (417)
T 4fbw_A 10 NENTIRILISSDPHVGYGEKDPVRGNDSFVSFNEILEIARERDVDMILLGGDIFHDNKPSRKALYQALRSLRLNCLGDKP 89 (417)
T ss_dssp CTTCEEEEEECCCCBTTTTTCTTTTTHHHHHHHHHHHHHHHTTCSEEEECSCCBSSSSCCHHHHHHHHHHHHHHHBSSCC
T ss_pred CCCCeEEEEEEcCCCCCcccccccchhHHHHHHHHHHHHHhcCCCEEEEcCccccCCCCCHHHHHHHHHHHHHhcccCCc
Confidence 3678999999999987431 23555566889999999999997665422 12222233222
Q ss_pred -----h----------------------hcCCCeeecCCCcccCCCCCCCcchhhhhh-----hhccCCCCCCCCCCCc-
Q 012895 203 -----Y----------------------ASSRPWMVTEGNHEIESIPIILPHAFKAYN-----ARWLMPYEESGSSSNL- 249 (454)
Q Consensus 203 -----l----------------------~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~-----~~~~~p~~~~~~~~~~- 249 (454)
| ...+|+|++.||||....... ......+. ..+.... ..++.
T Consensus 90 ~~~e~L~d~~~~~~~~~~~~~n~~d~~~~~gIpV~~I~GNHD~~~~~~~-~s~~~lL~~~g~v~l~g~~~----~~~~i~ 164 (417)
T 4fbw_A 90 CELELLSDTSLTTGDTAVCNINYLDPNINVAIPVFSIHGNHDDPSGDGR-YSALDILQVTGLVNYFGRVP----ENDNIV 164 (417)
T ss_dssp CCCEECC------------CCGGGCTTBCBSSCEEECCCGGGC-----C-CCHHHHHHHTTSCEECCCCC-------CEE
T ss_pred ccceeccchhhhcccccccccccccccccCCCeEEEEecCCCCcccccc-ccHHHHhccCCeEEEeCCcc----cCCcee
Confidence 2 125999999999998532110 00011110 0111000 00010
Q ss_pred --eEEEEeCe--EEEEEecccCCCCCCHHHH-HHHHHHHHh-hcc---CCCCeEEEEEccccccCCCCCCCCcHHHHHHH
Q 012895 250 --YYSFDIAG--AHIIMLGSYTDFDEDSAQY-KWLKADLAK-INR---KKTPWIFVLLHAPWYNTNTAHQGEGESMRNSM 320 (454)
Q Consensus 250 --~ys~~~g~--v~fi~Lds~~~~~~~~~Q~-~WL~~~L~~-~~~---~~~~w~Iv~~H~P~~~~~~~~~~~~~~~~~~l 320 (454)
-..+..|+ +.+.++... . .+.+ .++.+.... ... ....+.|++.|............ . +
T Consensus 165 ~~pv~l~~g~~~valyG~~~~----~-d~rl~r~~~~~~v~~~~p~~~~~~~~nIlvlH~~~~~~~~~~yi-p----~-- 232 (417)
T 4fbw_A 165 VSPILLQKGFTKLALYGISNV----R-DERLYHSFRENKVKFLRPDLYRDEWFNLLTVHQNHSAHTPTSYL-P----E-- 232 (417)
T ss_dssp ECCEEEEETTEEEEEEEECCC----C-HHHHHHHHHTTCEEEEEESTTTTTSEEEEEEESCSSCSSSSSSC-C----G--
T ss_pred EEeEEEEecCceEEEEeccCC----c-hhhhhhhhhhhhhhhcCcccccCCceEEEEecCCccCCCCcccC-c----h--
Confidence 11233343 555556421 1 2221 222221111 111 13457899999876433211100 0 1
Q ss_pred HHHHHhcCCcEEEecccccceeeecccCCCcCCCCcEEEEECCCCCCCCcccccCCCCCCCceeeecccCEEEEEEecCC
Q 012895 321 EELLYNARVDVVFAGHVHAYERFTRIYDNKADPCGPIYITIGDGGNREGLALEFKEPKSPLSMFQESSFGHARLKILDET 400 (454)
Q Consensus 321 ~~ll~~~~v~lvl~GH~H~y~r~~~~~~~~~~~~g~~yi~~G~gG~~~~~~~~~~~~~p~~~~~~~~~~G~~~l~v~~~~ 400 (454)
-+...++|+++.||+|..+...... ..+++..+..|+-.. . .+.. -....-|+..|++.+ .
T Consensus 233 --~l~~~~~DyvalGH~H~~~~~~~~~----~~~g~~i~~PGS~~~---~--s~~e-------~E~~~kg~~lvei~~-~ 293 (417)
T 4fbw_A 233 --SFIQDFYDFVLWGHEHECLIDGSYN----PTQKFTVVQPGSTIA---T--SLSP-------GETAPKHCGILNITG-K 293 (417)
T ss_dssp --GGSCTTCSEEEEESCCSCEEEEEEE----TTTTEEEEECCCSSC---S--SCCH-------HHHSCCEEEEEEEET-T
T ss_pred --hHhhcCCCEEEecCccccceecccc----CCCCEEEEECCCCCc---C--CCcc-------ccCCCCEEEEEEEEC-C
Confidence 1345679999999999966542100 012444444443221 1 1110 001234888999865 5
Q ss_pred eEEEEEEEecCCCceeeeEEEEEEc
Q 012895 401 RAHWSWYRNNDSDAVIADEVRLESL 425 (454)
Q Consensus 401 ~~~~~~~~~~dg~~~~~D~~~i~~~ 425 (454)
.+.++++..+.-..-+..++.+...
T Consensus 294 ~~~~e~i~l~~~Rpf~~~~v~L~~~ 318 (417)
T 4fbw_A 294 DFHLEKIRLRTVRPFIMKDIILSEV 318 (417)
T ss_dssp EEEEEEEECSSSCCEEEEEEEGGGC
T ss_pred EEEEEEEECCCcccEEEEEEEeecc
Confidence 6888998876545445666655443
No 29
>1su1_A Hypothetical protein YFCE; structural genomics, phosphoesterase, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.25A {Escherichia coli} SCOP: d.159.1.7
Probab=98.87 E-value=1.9e-08 Score=91.25 Aligned_cols=70 Identities=11% Similarity=0.129 Sum_probs=47.7
Q ss_pred CeEEEEEecCCCCCC-hHHHHHHhhcCCCCeEeecCccccCCCC---hhhH--HHHhhhhhhhhcCCCeeecCCCccc
Q 012895 147 PIEFAIVGDLGQTEW-TNSTLDHVGSKDYDVFLLPGDLSYADFQ---QPLW--DSFGRLVEPYASSRPWMVTEGNHEI 218 (454)
Q Consensus 147 ~~~f~~igD~~~~~~-~~~~l~~i~~~~pd~vl~~GDl~y~~~~---~~~~--~~~~~~~~~l~~~~P~~~v~GNHD~ 218 (454)
.+|++++||+|.... ..++++.++..++|+|+++||+++.+.. ...| ....+.++.+. .|+++++||||.
T Consensus 25 mmki~~iSD~H~~~~~l~~~l~~~~~~~~d~vi~~GDl~~~g~~~~~~~~~~~~~~~~~l~~~~--~~v~~V~GNHD~ 100 (208)
T 1su1_A 25 MMKLMFASDIHGSLPATERVLELFAQSGAQWLVILGDVLNHGPRNALPEGYAPAKVVERLNEVA--HKVIAVRGNCDS 100 (208)
T ss_dssp CCEEEEECCCTTBHHHHHHHHHHHHHHTCSEEEECSCCSCCCTTSCCCTTBCHHHHHHHHHTTG--GGEEECCCTTCC
T ss_pred cEEEEEEEcCCCCHHHHHHHHHHHHhcCCCEEEECCCccccCcccccccccCHHHHHHHHHhcC--CceEEEECCCch
Confidence 489999999996532 2345556656789999999999975432 1111 33344444432 589999999998
No 30
>1hp1_A 5'-nucleotidase; metallophosphatase, dinuclear, metalloenzyme, hydrolase, domain movement; HET: ATP; 1.70A {Escherichia coli} SCOP: d.114.1.1 d.159.1.2 PDB: 1ush_A 2ush_A 1hpu_A* 1ho5_A* 1oi8_A 1oid_A 1oie_A
Probab=98.83 E-value=7.7e-09 Score=107.07 Aligned_cols=188 Identities=15% Similarity=0.146 Sum_probs=94.7
Q ss_pred CCCeEEEEEecCCCCCCh-----------HHHHHHhhcC----CC-CeEeecCccccCCCChh--hHHHHhhhhhhhhcC
Q 012895 145 NFPIEFAIVGDLGQTEWT-----------NSTLDHVGSK----DY-DVFLLPGDLSYADFQQP--LWDSFGRLVEPYASS 206 (454)
Q Consensus 145 ~~~~~f~~igD~~~~~~~-----------~~~l~~i~~~----~p-d~vl~~GDl~y~~~~~~--~~~~~~~~~~~l~~~ 206 (454)
...++|++++|+|..... ...++++++. ++ +++|.+||++....... ..+...+.+..+
T Consensus 6 ~~~l~Il~~~D~H~~~~~~~~~~~G~~~~~~~v~~~r~~~~~~~~~~lvl~~GD~~~g~~~~~~~~~~~~~~~ln~l--- 82 (516)
T 1hp1_A 6 TYKITVLHTNDHHGHFWRNEYGEYGLAAQKTLVDGIRKEVAAEGGSVLLLSGGDINTGVPESDLQDAEPDFRGMNLV--- 82 (516)
T ss_dssp CEEEEEEEECCCTTCCSCCTTSCCCHHHHHHHHHHHHHHHHHHTCEEEEEECSCCSSSCHHHHTTTTHHHHHHHHHH---
T ss_pred ceEEEEEEecccccCccCCCCCCcCHHHHHHHHHHHHHhhhccCCCEEEEeCCccCCCcchhhhcCCcHHHHHHhcc---
Confidence 346899999999975321 2345555432 46 79999999985322110 112223334443
Q ss_pred CCeeecCCCcccCCCCCCCcchhhhhhhhccCCCCCC-------CC-CCCceEEEEeCe--EEEEEecccCC--CC-C--
Q 012895 207 RPWMVTEGNHEIESIPIILPHAFKAYNARWLMPYEES-------GS-SSNLYYSFDIAG--AHIIMLGSYTD--FD-E-- 271 (454)
Q Consensus 207 ~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~p~~~~-------~~-~~~~~ys~~~g~--v~fi~Lds~~~--~~-~-- 271 (454)
-+-++++||||+.... ..+..+.+....|.-.. +. ....|..++.++ +-|+++.+... +. .
T Consensus 83 g~d~~~~GNHEfd~g~----~~l~~~~~~~~~~~l~aNv~~~~~g~~~~~~~~i~~~~G~kIgiiG~~~~~~~~~~~p~~ 158 (516)
T 1hp1_A 83 GYDAMAIGNHEFDNPL----TVLRQQEKWAKFPLLSANIYQKSTGERLFKPWALFKRQDLKIAVIGLTTDDTAKIGNPEY 158 (516)
T ss_dssp TCCEEECCGGGGSSCH----HHHHHHHHHCSSCEECSSEEETTTTEESSBSEEEEEETTEEEEEEEEECTTTTTSSSCCS
T ss_pred CCCEEeeccccccCCH----HHHHHHHhhCCCCEEEeEEEECCCCCcccCCeEEEEECCEEEEEEEecccCcccccCcCc
Confidence 2447799999995321 12222222222222110 10 012355677887 55666654221 11 0
Q ss_pred --C---HHHHHHHHHHHHhhcc-CCCCeEEEEEccccccCCCCCCCCcHHHHHHHHHHHHhcCCcEEEecccccce
Q 012895 272 --D---SAQYKWLKADLAKINR-KKTPWIFVLLHAPWYNTNTAHQGEGESMRNSMEELLYNARVDVVFAGHVHAYE 341 (454)
Q Consensus 272 --~---~~Q~~WL~~~L~~~~~-~~~~w~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~y~ 341 (454)
+ ..-.+-+++.+++.+. .+.+.+|+++|.|....... +........+.+.+...++|++|+||.|...
T Consensus 159 ~~~~~~~d~~~~~~~~v~~l~~~~~~d~iI~l~H~g~~~~~~~--~~~~~~~~~la~~~~~~~iDlilgGHtH~~~ 232 (516)
T 1hp1_A 159 FTDIEFRKPADEAKLVIQELQQTEKPDIIIAATHMGHYDNGEH--GSNAPGDVEMARALPAGSLAMIVGGHSQDPV 232 (516)
T ss_dssp CTTEEECCHHHHHHHHHHHHHHHTCCSEEEEEEESCCCGGGCC--TTSCCCHHHHHHHSCTTSSSEEECCSSCCBC
T ss_pred cCCcEEeCHHHHHHHHHHHHHhcCCCCEEEEEecCCccCCCcc--cccCchHHHHHHhCCCCceeEEECCCCCccc
Confidence 0 0111222333332221 14567999999997543211 1110111234433344569999999999854
No 31
>2z1a_A 5'-nucleotidase; metal-binding, nucleotide-binding, hydrolase, structural genomics, NPPSFA; HET: THM; 1.75A {Thermus thermophilus} SCOP: d.114.1.1 d.159.1.2
Probab=98.78 E-value=1.4e-08 Score=105.81 Aligned_cols=175 Identities=18% Similarity=0.098 Sum_probs=93.9
Q ss_pred CCCeEEEEEecCCCCCC------------------hHHHHHHhhcCCCC-eEeecCccccCCCChhhHHHHhhhhhhhhc
Q 012895 145 NFPIEFAIVGDLGQTEW------------------TNSTLDHVGSKDYD-VFLLPGDLSYADFQQPLWDSFGRLVEPYAS 205 (454)
Q Consensus 145 ~~~~~f~~igD~~~~~~------------------~~~~l~~i~~~~pd-~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~ 205 (454)
...+||++++|+|.... ....++++++.+|| ++|.+||++...... .+......++.+..
T Consensus 27 ~~~l~Il~~~D~H~~~~~~~~~~~~~~~~~gg~~~~~~~v~~~r~~~~~~l~l~~GD~~~gs~~~-~~~~~~~~~~~ln~ 105 (552)
T 2z1a_A 27 GFTLTLVHTNDTHAHLEPVELTLSGEKTPVGGVARRVALFDRVWARAKNPLFLDAGDVFQGTLYF-NQYRGLADRYFMHR 105 (552)
T ss_dssp -CEEEEEEECCCTTCCSCEEEECSSSEEEECCHHHHHHHHHHHHHHSSSEEEEECSCCSSSSHHH-HHHTTHHHHHHHHH
T ss_pred CeeEEEEEEcccccCcccccccCcccccccCCHHHHHHHHHHHHhhCCCEEEEeCCCCCCCcHHH-HHhCCcHHHHHHHh
Confidence 46799999999996411 12355666667788 889999998743221 11111122232322
Q ss_pred CCCeeecCCCcccCCCCCCCcchhhhhhhhccCCCCCC-----CC-----CCCceEEEEeCe--EEEEEecccC-----C
Q 012895 206 SRPWMVTEGNHEIESIPIILPHAFKAYNARWLMPYEES-----GS-----SSNLYYSFDIAG--AHIIMLGSYT-----D 268 (454)
Q Consensus 206 ~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~p~~~~-----~~-----~~~~~ys~~~g~--v~fi~Lds~~-----~ 268 (454)
--+-++++||||+.... ..+..+.+....|.-.. +. ....|..++.++ +.|+++.+.. .
T Consensus 106 lg~d~~~lGNHEfd~g~----~~l~~~l~~~~~~~L~aNv~~~~~~~~~~~~~~~~i~~~~G~kIgiiG~~~~~~~~~~~ 181 (552)
T 2z1a_A 106 LRYRAMALGNHEFDLGP----GPLADFLKGARFKVVSANVDASREPRLKGLFAPYAVVVVGGERVGIIGLTTPDTREISN 181 (552)
T ss_dssp TTCCEEECCGGGGTTCH----HHHHHHHTTCCSEEECTTEECTTCGGGTTSCBSEEEEEETTEEEEEEEEECTTHHHHSC
T ss_pred cCCCccccccccccCCH----HHHHHHHhhCCCCEEEEEEecCCCcccccccCCeEEEEECCEEEEEEEecccchhhccC
Confidence 23457899999995421 12333333222222110 00 012456677887 5566665421 0
Q ss_pred C--C----CCHHHHHHHHHHHHhhccCCCCeEEEEEccccccCCCCCCCCcHHHHHHHHHHHHh-cCCcEEEecccccce
Q 012895 269 F--D----EDSAQYKWLKADLAKINRKKTPWIFVLLHAPWYNTNTAHQGEGESMRNSMEELLYN-ARVDVVFAGHVHAYE 341 (454)
Q Consensus 269 ~--~----~~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~-~~v~lvl~GH~H~y~ 341 (454)
. . ...++.+.+.++|++ ++.+.+|++.|.|.... ..+..+ .+||++|+||.|...
T Consensus 182 ~~~~~~~~d~~~~~~~~v~~l~~---~~~d~iIvL~H~g~~~d---------------~~la~~~~gvDlIlgGHtH~~~ 243 (552)
T 2z1a_A 182 PGPTVAFLDPYESAQKAVYELLA---KGVNKIVVLSHLGYGED---------------LKLARRLVGVQVIVGGHSHTLL 243 (552)
T ss_dssp CCTTCEECCHHHHHHHHHHHHHH---TTCCCEEEEEESCHHHH---------------HHHHTTCSSCCEEEECSSCCCB
T ss_pred CCCCcEECCHHHHHHHHHHHHHh---cCCCEEEEEeCCCcchH---------------HHHHHhCCCccEEEeCCcCccc
Confidence 0 0 011333333334443 24567999999985210 122233 579999999999854
Q ss_pred e
Q 012895 342 R 342 (454)
Q Consensus 342 r 342 (454)
.
T Consensus 244 ~ 244 (552)
T 2z1a_A 244 G 244 (552)
T ss_dssp S
T ss_pred c
Confidence 3
No 32
>3qfk_A Uncharacterized protein; structural genomics, center for structural genomics of infec diseases, csgid, phosphoesterase, hydrolase; HET: MSE AKG; 2.05A {Staphylococcus aureus subsp}
Probab=98.77 E-value=9.4e-08 Score=99.07 Aligned_cols=190 Identities=19% Similarity=0.182 Sum_probs=96.2
Q ss_pred CCCeEEEEEecCCCCCC-----------------hHHHHHHhhcCCCC-eEeecCccccCCCChhhHHH----Hhhhhhh
Q 012895 145 NFPIEFAIVGDLGQTEW-----------------TNSTLDHVGSKDYD-VFLLPGDLSYADFQQPLWDS----FGRLVEP 202 (454)
Q Consensus 145 ~~~~~f~~igD~~~~~~-----------------~~~~l~~i~~~~pd-~vl~~GDl~y~~~~~~~~~~----~~~~~~~ 202 (454)
...++|++++|+|.... ....++++++..++ ++|.+||++........... ....++.
T Consensus 17 ~~~l~Il~tnD~Hg~~~~~~~~~~~~~~~gG~a~l~~~i~~~r~~~~~~l~l~~GD~~~gs~~~~~~~~~~~~~~~~~~~ 96 (527)
T 3qfk_A 17 GSNIAFYVVSDVHGYIFPTDFTSRNQYQPMGLLLANHVIEQDRRQYDQSFKIDNGDFLQGSPFCNYLIAHSGSSQPLVDF 96 (527)
T ss_dssp -CEEEEEEECCCTTCCSSCCSSSTTCCCSCSHHHHHHHHHHHHTTSSEEEEEECSCCSSSSHHHHHHHHTTCSSHHHHHH
T ss_pred CCcEEEEEEeccCCCccCcccccCCCcCCCcHHHHHHHHHHHHhcCCCEEEEECCCcCCCcHHHHHHhhcccCcchHHHH
Confidence 46799999999996421 12456666677777 67779999864322110000 0122222
Q ss_pred hhcCCCeeecCCCcccCCCCCCCcchhhhhhhhccCCCCCC-----CC--CCCceEEEEeCe--EEEEEecccC--CCCC
Q 012895 203 YASSRPWMVTEGNHEIESIPIILPHAFKAYNARWLMPYEES-----GS--SSNLYYSFDIAG--AHIIMLGSYT--DFDE 271 (454)
Q Consensus 203 l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~p~~~~-----~~--~~~~~ys~~~g~--v~fi~Lds~~--~~~~ 271 (454)
+..--+-++++||||+.... ..+..+.+....|.-.. +. ....|.-++.++ +-||++.+.. .+..
T Consensus 97 ln~lg~D~~t~GNHefd~G~----~~l~~~~~~~~~p~l~aNv~~~g~p~~~~py~i~e~~G~kIgviG~~~~~~~~~~~ 172 (527)
T 3qfk_A 97 YNRMAFDFGTLGNHEFNYGL----PYLKDTLRRLNYPVLCANIYENDSTLTDNGVKYFQVGDQTVGVIGLTTQFIPHWEQ 172 (527)
T ss_dssp HHHTCCCEECCCGGGGTTCH----HHHHHHHHHCSSCBCCSSEEETTEESSSCSEEEEEETTEEEEEEEEECTTGGGTSC
T ss_pred HHhcCCcEEeccccccccCH----HHHHHHHHhCCCCEEEeEeeeCCCCccCCCEEEEEECCEEEEEEEeccCCcccccC
Confidence 32223345689999985432 13333333333332211 10 012356677887 4556665421 1110
Q ss_pred --------CHHHHHHHHHHHHhhccCCCCeEEEEEccccccCCCCC------CCCcHHHHHHHHHHHHhcCCcEEEeccc
Q 012895 272 --------DSAQYKWLKADLAKINRKKTPWIFVLLHAPWYNTNTAH------QGEGESMRNSMEELLYNARVDVVFAGHV 337 (454)
Q Consensus 272 --------~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~~~~~------~~~~~~~~~~l~~ll~~~~v~lvl~GH~ 337 (454)
-....+.+++.+++.+. +.+.+|+++|.+.-...... .++. ...++.+-+ ..+||++|+||.
T Consensus 173 ~~~~~g~~~~d~~~~~~~~v~~l~~-~~D~iIvl~H~G~~~d~~~~~~~~~~~~e~--~~~~la~~~-~~giDlIlgGHt 248 (527)
T 3qfk_A 173 PEHIQSLTFHSAFEILQQYLPEMKR-HADIIVVCYHGGFEKDLESGTPTEVLTGEN--EGYAMLEAF-SKDIDIFITGHQ 248 (527)
T ss_dssp HHHHTTEEECCHHHHHHHHHHHHHH-HCSEEEEEEECCCSBCTTTCCBSSCCSSSC--CHHHHHHHH-GGGCSEEECCSS
T ss_pred ccccCCcEEcCHHHHHHHHHHHHHh-CCCEEEEEeCcCcccccccCccccccccch--HHHHHHHhc-CCCCcEEEECCC
Confidence 01223444444444432 56778999998753221100 1111 111232222 247999999999
Q ss_pred cccee
Q 012895 338 HAYER 342 (454)
Q Consensus 338 H~y~r 342 (454)
|....
T Consensus 249 H~~~~ 253 (527)
T 3qfk_A 249 HRQIA 253 (527)
T ss_dssp CCEEE
T ss_pred Ccccc
Confidence 98543
No 33
>4h2g_A 5'-nucleotidase; dimer, hydrolase, phosphatase, extracellular; HET: ADN; 1.55A {Homo sapiens} PDB: 4h2f_A* 4h1y_P* 4h2i_A* 4h1s_A* 4h2b_A*
Probab=98.63 E-value=6.8e-08 Score=100.51 Aligned_cols=176 Identities=14% Similarity=0.141 Sum_probs=93.6
Q ss_pred CCCeEEEEEecCCCCCC---------------------hHHHHHHhhcCCC-CeEeecCccccCCCChh--hHHHHhhhh
Q 012895 145 NFPIEFAIVGDLGQTEW---------------------TNSTLDHVGSKDY-DVFLLPGDLSYADFQQP--LWDSFGRLV 200 (454)
Q Consensus 145 ~~~~~f~~igD~~~~~~---------------------~~~~l~~i~~~~p-d~vl~~GDl~y~~~~~~--~~~~~~~~~ 200 (454)
...++|++++|+|.... ....++++++.+| +++|.+||++....... ......+.+
T Consensus 23 ~~~l~Il~~nD~Hg~~~~~~~~~~~~~~~~~~~gG~a~l~~~i~~~r~~~~~~l~l~~GD~~~g~~~~~~~~g~~~~~~l 102 (546)
T 4h2g_A 23 PWELTILHTNDVHSRLEQTSEDSSKCVDASRCMGGVARLFTKVQQIRRAEPNVLLLDAGDQYQGTIWFTVYKGAEVAHFM 102 (546)
T ss_dssp CEEEEEEEECCCTTCCSCBCTTSSBCSSGGGCBCCHHHHHHHHHHHHHHCSSEEEEECSCCSSSSHHHHHHTTHHHHHHH
T ss_pred ceEEEEEEecccccCCcccccccccccccccccCCHHHHHHHHHHHHhhCCCEEEEECCccCCCchhhhhhCChHHHHHH
Confidence 46799999999985321 1234566665566 58999999997543211 112223333
Q ss_pred hhhhcCCCeeecCCCcccCCCCCCCcchhh-hhhhhccCCCCCCC---C---------CCCceEEEEeCeEE--EEEecc
Q 012895 201 EPYASSRPWMVTEGNHEIESIPIILPHAFK-AYNARWLMPYEESG---S---------SSNLYYSFDIAGAH--IIMLGS 265 (454)
Q Consensus 201 ~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~-~~~~~~~~p~~~~~---~---------~~~~~ys~~~g~v~--fi~Lds 265 (454)
..+ -+-++++||||+.... ..+. .+.+....|..... . ....|.-++.++++ ||++.+
T Consensus 103 n~l---g~d~~~~GNHEfd~g~----~~l~~~~~~~~~~~~l~aNv~~~~~~~p~~~~~~~~~~i~~~~G~kIgiiG~~~ 175 (546)
T 4h2g_A 103 NAL---RYDAMALGNHEFDNGV----EGLIEPLLKEAKFPILSANIKAKGPLASQISGLYLPYKVLPVGDEVVGIVGYTS 175 (546)
T ss_dssp HHH---TCSEEECCGGGGTTHH----HHHHTTTTTTCSSCEECSSEEECHHHHHHHBTTBBSEEEEEETTEEEEEEEEEC
T ss_pred Hhc---CCcEEeccCcccccCH----HHHHHHHHhhcCCCEEEEEeecCCCCCccccccCCCeEEEEECCEEEEEEEecc
Confidence 333 2336789999995321 1122 22222222221110 0 01345667788754 555543
Q ss_pred cCC--C-CCC-----HHHHHHHHHHHHhhccCCCCeEEEEEccccccCCCCCCCCcHHHHHHHHHHHHhcCCcEEEeccc
Q 012895 266 YTD--F-DED-----SAQYKWLKADLAKINRKKTPWIFVLLHAPWYNTNTAHQGEGESMRNSMEELLYNARVDVVFAGHV 337 (454)
Q Consensus 266 ~~~--~-~~~-----~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~ 337 (454)
... + ... ....+.+++.+++.+.++.+.+|++.|.+... ...+...+ .+||++|+||.
T Consensus 176 ~~~~~~~~~~~~~~~~d~~~~~~~~v~~l~~~g~D~iI~l~H~g~~~------------d~~la~~~--~giDlIlgGHt 241 (546)
T 4h2g_A 176 KETPFLSNPGTNLVFEDEITALQPEVDKLKTLNVNKIIALGHSGFEM------------DKLIAQKV--RGVDVVVGGHS 241 (546)
T ss_dssp TTHHHHSCCCSSEEECCHHHHHHHHHHHHHHTTCCCEEEEEESCHHH------------HHHHHHHS--TTCCEEECCSS
T ss_pred cccccccCCCCCcEEccHHHHHHHHHHHHHhcCCCEEEEEeccCccc------------hHHHHHhC--CCCcEEEeCCc
Confidence 210 0 000 12344455555554433567799999987421 12222222 37999999999
Q ss_pred ccce
Q 012895 338 HAYE 341 (454)
Q Consensus 338 H~y~ 341 (454)
|...
T Consensus 242 H~~~ 245 (546)
T 4h2g_A 242 NTFL 245 (546)
T ss_dssp CCCC
T ss_pred Cccc
Confidence 9843
No 34
>2wdc_A SOXB, sulfur oxidation protein SOXB; sulfur-sulfur hydrolysis, sulfur oxidation pathway, Cys S-thiosulfonate, hydrolase; 1.50A {Thermus thermophilus} PDB: 2wdd_A* 2wde_A 2wdf_A
Probab=98.61 E-value=4.9e-07 Score=94.18 Aligned_cols=150 Identities=12% Similarity=0.063 Sum_probs=78.4
Q ss_pred HHHHhhcC--C--CC-eEeecCccccCCCChhhH---HHHhhhhhhhhcCCCeeecCCCcccCCCCCCCcchhhhhhhhc
Q 012895 165 TLDHVGSK--D--YD-VFLLPGDLSYADFQQPLW---DSFGRLVEPYASSRPWMVTEGNHEIESIPIILPHAFKAYNARW 236 (454)
Q Consensus 165 ~l~~i~~~--~--pd-~vl~~GDl~y~~~~~~~~---~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~ 236 (454)
.++++++. + || ++|.+||++..... ..+ ....+.+..+. .+++ + ||||+.... ..+..+.+.+
T Consensus 110 ~v~~~r~~~~~~gpd~Lll~~GD~~~gs~~-~~~~~g~~~~~~ln~lg--~d~~-~-GNHEfd~G~----~~l~~~l~~~ 180 (562)
T 2wdc_A 110 LIRDQKARVEAEGGKALVLDGGDTWTNSGL-SLLTRGEAVVRWQNLVG--VDHM-V-SHWEWTLGR----ERVEELLGLF 180 (562)
T ss_dssp HHHHHHHHHHHTTCCEEEEECSCCSSSSHH-HHHHTTHHHHHHHHHHT--CCEE-C-CSGGGGGCH----HHHHHHHHHC
T ss_pred HHHHHHhhhhcCCCCEEEEeCCCCCCcchh-hhhhCCHHHHHHHHhhC--CcEE-e-cchhcccCH----HHHHHHHHhC
Confidence 34555443 4 88 88999999974331 111 22334444443 5665 7 999985321 2333333333
Q ss_pred cCCCCCC-------CC-CCCceEEEEeCe--EEEEEecccC-----------C--CCCCHHHHHHHHHHHHhhccCCCCe
Q 012895 237 LMPYEES-------GS-SSNLYYSFDIAG--AHIIMLGSYT-----------D--FDEDSAQYKWLKADLAKINRKKTPW 293 (454)
Q Consensus 237 ~~p~~~~-------~~-~~~~~ys~~~g~--v~fi~Lds~~-----------~--~~~~~~Q~~WL~~~L~~~~~~~~~w 293 (454)
..|.-.. +. .-..|.-++.++ +-||++.+.. . +....+..+-+.++|++ ++.+.
T Consensus 181 ~~p~L~aNv~~~~~~~~~~~py~i~e~~G~kIgiiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~---~~~d~ 257 (562)
T 2wdc_A 181 RGEFLSYNIVDDLFGDPLFPAYRIHRVGPYALAVVGASYPYVKVSHPESFTEGLSFALDERRLQEAVDKARA---EGANA 257 (562)
T ss_dssp CSEECCSSCEETTTCCBSSCSEEEEEETTEEEEEEEECCTTHHHHSCGGGGTTEECCCCHHHHHHHHHHHHH---TTCSE
T ss_pred CCCEEEEEEEecCCCCcccCCeEEEEECCeEEEEEeeccCcccccccccccCCcEEeCHHHHHHHHHHHHHH---CCCCE
Confidence 3332211 10 012355667777 5566665421 0 11122333322333332 25567
Q ss_pred EEEEEccccccCCCCCCCCcHHHHHHHHHHHHh-cCCcEEEecccccce
Q 012895 294 IFVLLHAPWYNTNTAHQGEGESMRNSMEELLYN-ARVDVVFAGHVHAYE 341 (454)
Q Consensus 294 ~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~-~~v~lvl~GH~H~y~ 341 (454)
+|++.|.|... .. .+.++ .++|++|+||.|...
T Consensus 258 iIvLsH~g~~~------------d~---~la~~~~giDlIlgGHtH~~~ 291 (562)
T 2wdc_A 258 VVLLSHNGMQL------------DA---ALAERIRGIDLILSGHTHDLT 291 (562)
T ss_dssp EEEEECSCHHH------------HH---HHHTTSSSCCEEEECSSCCCC
T ss_pred EEEEeCCCCcc------------hH---HHHhcCCCCcEEEeCCCCCCC
Confidence 99999998521 01 23333 479999999999854
No 35
>3ztv_A NAD nucleotidase, NADN; hydrolase, NAD pyrophosphatase, NMN nucleotidase, periplasmi enzyme, CD73; HET: ADN; 1.30A {Haemophilus influenzae} PDB: 3zu0_A*
Probab=98.59 E-value=2.5e-07 Score=96.89 Aligned_cols=175 Identities=17% Similarity=0.143 Sum_probs=93.5
Q ss_pred CCeEEEEEecCCCCCCh----------------------HHHHHHhhcCCCC-eEeecCccccCCCChh--hHHHHhhhh
Q 012895 146 FPIEFAIVGDLGQTEWT----------------------NSTLDHVGSKDYD-VFLLPGDLSYADFQQP--LWDSFGRLV 200 (454)
Q Consensus 146 ~~~~f~~igD~~~~~~~----------------------~~~l~~i~~~~pd-~vl~~GDl~y~~~~~~--~~~~~~~~~ 200 (454)
-.++|++++|+|..... ...++++++..++ ++|.+||++....... ......+.+
T Consensus 11 ~~l~Il~tnD~Hg~~~~~~~~~~~~~~~~~~~~gG~arla~~i~~~r~~~~~~l~l~~GD~~~gs~~~~~~~g~~~~~~l 90 (579)
T 3ztv_A 11 VELSILHINDHHSYLEPHETRINLNGQQTKVDIGGFSAVNAKLNKLRKKYKNPLVLHAGDAITGTLYFTLFGGSADAAVM 90 (579)
T ss_dssp EEEEEEEECCCTTCCSCEEEEEEETTEEEEEEECCHHHHHHHHHHHHHHSSSEEEEECSCCSCSSHHHHTTTTHHHHHHH
T ss_pred eEEEEEEeCccccCccCCccccccCCcccccccCCHHHHHHHHHHHHhhCCCEEEEeCCCCCCCceeeeecCCHHHHHHH
Confidence 45899999999954211 2345566655666 8899999997542111 112222333
Q ss_pred hhhhcCCCeeecCCCcccCCCCCCCcchhhhhhhhccCCCCCC------CCC----CCceEEEEeCe--EEEEEecc-c-
Q 012895 201 EPYASSRPWMVTEGNHEIESIPIILPHAFKAYNARWLMPYEES------GSS----SNLYYSFDIAG--AHIIMLGS-Y- 266 (454)
Q Consensus 201 ~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~p~~~~------~~~----~~~~ys~~~g~--v~fi~Lds-~- 266 (454)
..+ -+-++++||||+.... ..+..+.+....|.... +.. -..|.-++.++ +-||++.+ .
T Consensus 91 n~l---g~D~~tlGNHEfd~G~----~~l~~~~~~~~fp~l~aNv~~~~~~~~~~~~~py~i~~~~G~kIgviG~t~~~~ 163 (579)
T 3ztv_A 91 NAG---NFHYFTLGNHEFDAGN----EGLLKLLEPLKIPVLSANVIPDKSSILYNKWKPYDIFTVDGEKIAIIGLDTVNK 163 (579)
T ss_dssp HHH---TCSEEECCSGGGTTHH----HHHHHHHTTCCSCEECSSEEECTTSTTTTSCBSEEEEEETTEEEEEEEEECSHH
T ss_pred Hhc---CcCeeeccccccccCH----HHHHHHHHhcCCCeeeeeEeccCCcccccccCCeEEEEECCEEEEEEEEEcCCc
Confidence 333 3345789999985321 12333333333332110 110 12355677887 55667643 1
Q ss_pred ----CCCCCC---HHHHHHHHHHHHhhccCCCCeEEEEEccccccCCCCCCCCcHHHHHHHHHHHHhcCCcEEEeccccc
Q 012895 267 ----TDFDED---SAQYKWLKADLAKINRKKTPWIFVLLHAPWYNTNTAHQGEGESMRNSMEELLYNARVDVVFAGHVHA 339 (454)
Q Consensus 267 ----~~~~~~---~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~ 339 (454)
.....+ ....+-+++.+++.+.++.+.+|+++|.+... ...+...+ .+||++|+||.|.
T Consensus 164 ~~~~~~p~~~~~f~d~~~~~~~~v~~lk~~g~d~iI~l~H~G~~~------------d~~la~~~--~giDlIlgGHtH~ 229 (579)
T 3ztv_A 164 TVNSSSPGKDVKFYDEIATAQIMANALKQQGINKIILLSHAGSEK------------NIEIAQKV--NDIDVIVTGDSHY 229 (579)
T ss_dssp HHHHSCCCTTEEECCHHHHHHHHHHHHHTTTCCCEEEEEETCHHH------------HHHHHHHC--SSCCEEEECSSCC
T ss_pred cccccCCCCCceEcCHHHHHHHHHHHHHhCCCCEEEEEeccCchh------------hHHHHHhC--CCCCEEEeCCCCc
Confidence 011100 22334455555555443567799999987421 11222211 3799999999998
Q ss_pred ce
Q 012895 340 YE 341 (454)
Q Consensus 340 y~ 341 (454)
..
T Consensus 230 ~~ 231 (579)
T 3ztv_A 230 LY 231 (579)
T ss_dssp EE
T ss_pred cc
Confidence 55
No 36
>3ive_A Nucleotidase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics, nysgxrc; HET: CTN; 1.70A {Escherichia coli O6} PDB: 3ivd_A*
Probab=98.58 E-value=3.1e-07 Score=94.75 Aligned_cols=186 Identities=16% Similarity=0.168 Sum_probs=95.0
Q ss_pred CCeEEEEEecCCCCCCh-------------------HHHHHHhhcCCCCeEee-cCccccCCCChhhHHHHhhhhhhhhc
Q 012895 146 FPIEFAIVGDLGQTEWT-------------------NSTLDHVGSKDYDVFLL-PGDLSYADFQQPLWDSFGRLVEPYAS 205 (454)
Q Consensus 146 ~~~~f~~igD~~~~~~~-------------------~~~l~~i~~~~pd~vl~-~GDl~y~~~~~~~~~~~~~~~~~l~~ 205 (454)
..++|++++|+|..... ...++++++.+++.+++ +||++..... ..+......++.+..
T Consensus 5 ~~l~Il~tnD~Hg~~~~~~~~~~~~~~~~~gG~a~la~~i~~~r~~~~~~llldaGD~~~g~~~-~~~~~g~~~~~~ln~ 83 (509)
T 3ive_A 5 KDVTIIYTNDLHAHVEPYKVPWIADGKRDIGGWANITTLVKQEKAKNKATWFFDAGDYFTGPYI-SSLTKGKAIIDIMNT 83 (509)
T ss_dssp EEEEEEEECCCTTCCSCBCCTTSGGGTSCBCCHHHHHHHHHHHHHHCSSEEEEECSCCSSSSHH-HHTTTTHHHHHHHTT
T ss_pred eEEEEEEEccccCCccCcccccccCCCcCcCCHHHHHHHHHHHHhcCCCeEEEECCCCCCCchh-hhhcCChHHHHHHHh
Confidence 45899999999853210 23556666778887776 9999864211 111111122333333
Q ss_pred CCCeeecCCCcccCCCCCCCcchhhhhhhhccCCCCC-------CCCC--CCceEEEEeCe--EEEEEeccc-----CCC
Q 012895 206 SRPWMVTEGNHEIESIPIILPHAFKAYNARWLMPYEE-------SGSS--SNLYYSFDIAG--AHIIMLGSY-----TDF 269 (454)
Q Consensus 206 ~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~p~~~-------~~~~--~~~~ys~~~g~--v~fi~Lds~-----~~~ 269 (454)
.-+-++++||||+.... ..+..+.+....|.-. .+.. ...|.-++.++ +-||++-+. ..+
T Consensus 84 lg~D~~tlGNHEfd~G~----~~l~~~l~~~~~p~l~aNv~~~~~~~p~~~~py~i~e~~G~kIgiiG~t~~~~~~~~~~ 159 (509)
T 3ive_A 84 MPFDAVTIGNHEFDHGW----DNTLLQLSQAKFPIVQGNIFYQNSSKSFWDKPYTIIEKDGVKIGVIGLHGVFAFNDTVS 159 (509)
T ss_dssp SCCSEECCCGGGGTTCH----HHHHHHHTTCSSCBCCCSEEETTSCCBSSSCSEEEEEETTEEEEEEEEECHHHHHHHSC
T ss_pred cCCcEEeecccccccCH----HHHHHHHhhCCCCEEEEEEEECCCCCccCcCCeEEEEECCEEEEEEecccCcccccccc
Confidence 34556789999985432 1223333322223211 0110 13355677887 555666321 000
Q ss_pred ---CC---CHHHHHHHHHHHHhhccCCCCeEEEEEccccccCCCCCCC----CcHHHHHHHHHHHHh-cCCcEEEecccc
Q 012895 270 ---DE---DSAQYKWLKADLAKINRKKTPWIFVLLHAPWYNTNTAHQG----EGESMRNSMEELLYN-ARVDVVFAGHVH 338 (454)
Q Consensus 270 ---~~---~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~~~~~~~----~~~~~~~~l~~ll~~-~~v~lvl~GH~H 338 (454)
.. .....+.+++.+++.+. +.+.+|+++|.+.-........ ...... ..+.++ .++|++|+||.|
T Consensus 160 ~~~~~g~~~~d~~~~~~~~v~~Lk~-~~D~iIvl~H~G~~~~~~~~~~~~~~~~~~~d---~~la~~~~giDlIlgGHtH 235 (509)
T 3ive_A 160 AATRVGIEARDEIKWLQRYIDELKG-KVDLTVALIHEGVPARQSSMGGTDVRRALDKD---IQTASQVKGLDILITGHAH 235 (509)
T ss_dssp GGGCTTEEECCHHHHHHHHHHHHTT-TCSEEEEEEECSSCCCCCCC---CCCCCCHHH---HHHHHHCSSCCEEEEESSC
T ss_pred cccCCCCEEcCHHHHHHHHHHHHHh-cCCEEEEEeccCcCCccccccccccccccchH---HHHHhcCCCCcEEEeCCcC
Confidence 00 12334555555555544 3677899999875321110000 001111 223333 369999999999
Q ss_pred cc
Q 012895 339 AY 340 (454)
Q Consensus 339 ~y 340 (454)
..
T Consensus 236 ~~ 237 (509)
T 3ive_A 236 VG 237 (509)
T ss_dssp CC
T ss_pred cc
Confidence 73
No 37
>1g5b_A Serine/threonine protein phosphatase; bacteriophage lambda, Ser/Thr protein phosphatase, ppase, manganese, sulfate, viral protein; 2.15A {Enterobacteria phage lambda} SCOP: d.159.1.3
Probab=98.56 E-value=4.4e-08 Score=89.72 Aligned_cols=68 Identities=24% Similarity=0.215 Sum_probs=45.8
Q ss_pred CCCeEEEEEecCCCCCC-hHHHHHHhhc-CCCCeEeecCccccCCCChhhHHHHhhhhhhhhcCCCeeecCCCcccC
Q 012895 145 NFPIEFAIVGDLGQTEW-TNSTLDHVGS-KDYDVFLLPGDLSYADFQQPLWDSFGRLVEPYASSRPWMVTEGNHEIE 219 (454)
Q Consensus 145 ~~~~~f~~igD~~~~~~-~~~~l~~i~~-~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~ 219 (454)
...+|++++||+|.... ..++++.+.. .++|.++++||+++.+.... +.++.+. ..+++++.||||..
T Consensus 10 ~~~~~i~visDiHg~~~~l~~~l~~~~~~~~~d~~i~~GD~~~~g~~~~------~~~~~l~-~~~~~~v~GNhd~~ 79 (221)
T 1g5b_A 10 SKYRNIWVVGDLHGCYTNLMNKLDTIGFDNKKDLLISVGDLVDRGAENV------ECLELIT-FPWFRAVRGNHEQM 79 (221)
T ss_dssp GGCSCEEEECCCTTCHHHHHHHHHHHTCCTTTCEEEECSCCSSSSSCHH------HHHGGGG-STTEEECCCHHHHH
T ss_pred CCCceEEEEEcCCCCHHHHHHHHHHccCCCCCCEEEEeCCccCCCCChH------HHHHHHh-cCCEEEEccCcHHH
Confidence 34579999999996432 2345555544 47899999999997654321 1222222 25899999999973
No 38
>1t70_A Phosphatase; crystal, X-RAY crystallography, structural GENO berkeley structural genomics center, BSGC, PSI, protein STR initiative; 2.30A {Deinococcus radiodurans} SCOP: d.159.1.9
Probab=98.30 E-value=1.2e-05 Score=74.54 Aligned_cols=180 Identities=20% Similarity=0.205 Sum_probs=94.1
Q ss_pred eEEEEEecCCCCCCh----HHHHHHhhcCCCCeEeecCccccCCCChhhHHHHhhhhhhhhcCCCeeecCCCcccCCCCC
Q 012895 148 IEFAIVGDLGQTEWT----NSTLDHVGSKDYDVFLLPGDLSYADFQQPLWDSFGRLVEPYASSRPWMVTEGNHEIESIPI 223 (454)
Q Consensus 148 ~~f~~igD~~~~~~~----~~~l~~i~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~ 223 (454)
+|++++||.=. ... ...++++++.. |++|..|+.+..+.... ....+.+..+. +-+ .+.||||++..
T Consensus 1 m~ilf~GDv~g-~~G~~~~~~~l~~lr~~~-d~vi~nge~~~~G~g~~--~~~~~~l~~~G--~Da-~TlGNHefD~~-- 71 (255)
T 1t70_A 1 MRVLFIGDVFG-QPGRRVLQNHLPTIRPQF-DFVIVNMENSAGGFGMH--RDAARGALEAG--AGC-LTLGNHAWHHK-- 71 (255)
T ss_dssp CEEEEECCBBH-HHHHHHHHHHHHHHGGGC-SEEEEECTBTTTTSSCC--HHHHHHHHHHT--CSE-EECCTTTTSST--
T ss_pred CEEEEEeccCC-hHHHHHHHHHHHHHHhhC-CEEEECCCCccCCcCCC--HHHHHHHHhCC--CCE-EEeccccccCc--
Confidence 58999999832 122 23556665555 99999888876543211 12223333332 344 47799999642
Q ss_pred CCcchhhhhhhhcc----CCCCC--CCCCCCceEEEEeCe--EEEEEecccCCCCCCHHHHHHHHHHHHhhccCCCCeEE
Q 012895 224 ILPHAFKAYNARWL----MPYEE--SGSSSNLYYSFDIAG--AHIIMLGSYTDFDEDSAQYKWLKADLAKINRKKTPWIF 295 (454)
Q Consensus 224 ~~~~~~~~~~~~~~----~p~~~--~~~~~~~~ys~~~g~--v~fi~Lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~w~I 295 (454)
....|.+... .|.|- .+.....|.-++.++ +-+|.|-+......-..-.+-+++.+++. +.+.+|
T Consensus 72 ----~l~~~l~~~~~~~~~~aN~~~~~~pg~g~~I~~~~G~kIgVigl~g~~~~~~~~~p~~~~~~~v~~l---~~d~II 144 (255)
T 1t70_A 72 ----DIYPMLSEDTYPIVRPLNYADPGTPGVGWRTFDVNGEKLTVVNLLGRVFMEAVDNPFRTMDALLERD---DLGTVF 144 (255)
T ss_dssp ----THHHHHHTTCSCEECCSCCCCTTCSSCSEEEEECSSSEEEEEEEECCTTSCCCSCHHHHHHHHTTCS---SCCEEE
T ss_pred ----hHHHHHhhCCCcEEEEeccCCCCCCCCCeEEEEECCEEEEEEEeecCcCcccccCHHHHHHHHHHHh---CCCEEE
Confidence 1122221111 13221 122234566788887 44555544321111222233455555554 456789
Q ss_pred EEEccccccCCCCCCCCcHHHHHHHHHHHHhcCCcEEEecccccceeeecccCCCcCCCCcEEEE
Q 012895 296 VLLHAPWYNTNTAHQGEGESMRNSMEELLYNARVDVVFAGHVHAYERFTRIYDNKADPCGPIYIT 360 (454)
Q Consensus 296 v~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~y~r~~~~~~~~~~~~g~~yi~ 360 (454)
+.+|.- .....+.+.. .-.-+||+++.||+|....-..+. ++|+.|++
T Consensus 145 v~~H~e-----------~t~Ek~~la~-~~dg~vd~VvGgHTHv~~~d~~il-----~~gt~~i~ 192 (255)
T 1t70_A 145 VDFHAE-----------ATSEKEAMGW-HLAGRVAAVIGTHTHVPTADTRIL-----KGGTAYQT 192 (255)
T ss_dssp EEEECS-----------CHHHHHHHHH-HHTTSSSEEEEESSCSCBSCCEEE-----TTTEEEES
T ss_pred EEeCCC-----------ChHHHHHHHH-hCCCCeEEEEeCCCCcCCCceEEc-----CCCeEEEE
Confidence 999941 1112223332 223469999999999844322211 35777765
No 39
>1t71_A Phosphatase, conserved HYPO; crystal, X-RAY crystallography, structural GENO berkeley structural genomics center, BSGC, PSI; 2.10A {Mycoplasma pneumoniae M129} SCOP: d.159.1.9
Probab=98.28 E-value=1.1e-05 Score=75.80 Aligned_cols=185 Identities=18% Similarity=0.156 Sum_probs=96.9
Q ss_pred CCeEEEEEecCCCCCCh---HHHHHHhhcC-CCCeEeecCccccCCCChhhHHHHhhhhhhhhcCCCeeecCCCcccCCC
Q 012895 146 FPIEFAIVGDLGQTEWT---NSTLDHVGSK-DYDVFLLPGDLSYADFQQPLWDSFGRLVEPYASSRPWMVTEGNHEIESI 221 (454)
Q Consensus 146 ~~~~f~~igD~~~~~~~---~~~l~~i~~~-~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~ 221 (454)
..+|++++||.+..... ...++++++. ++|+++..||.+..+... .....+.+..+. +- ..+.||||++..
T Consensus 3 ~~m~ilf~GDv~G~~G~~~l~~~l~~lr~~~~~d~vi~Ngen~~gG~g~--~~~~~~~ln~~G--~D-a~TlGNHefD~g 77 (281)
T 1t71_A 3 NSIKFIFLGDVYGKAGRNIIKNNLAQLKSKYQADLVIVNAENTTHGKGL--SLKHYEFLKEAG--VN-YITMGNHTWFQK 77 (281)
T ss_dssp CCCEEEEECEEBHHHHHHHHHTTHHHHHHHHTCSEEEEECTBTTTTSSC--CHHHHHHHHHHT--CC-EEECCTTTTCCG
T ss_pred ceEEEEEECCcCChHHHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCCc--CHHHHHHHHhcC--CC-EEEEccCcccCC
Confidence 35899999999743211 2234555433 689999999998755321 122233333332 33 357899999644
Q ss_pred CCCCcchhhhhhhh--c----cCCCCCCCC-CCCceEEEEeCe--EEEEEecccCCCC--CCHHHHHHHHHHHHhhccCC
Q 012895 222 PIILPHAFKAYNAR--W----LMPYEESGS-SSNLYYSFDIAG--AHIIMLGSYTDFD--EDSAQYKWLKADLAKINRKK 290 (454)
Q Consensus 222 ~~~~~~~~~~~~~~--~----~~p~~~~~~-~~~~~ys~~~g~--v~fi~Lds~~~~~--~~~~Q~~WL~~~L~~~~~~~ 290 (454)
.. ...|.+. . +.|...... ....|.-++.++ +-+|.|-+...+. ....-.+.+++.++ +++
T Consensus 78 ~~-----~~~~l~~~~~v~~aN~p~~~~~~~~g~g~~I~e~~G~kIgVIgl~g~~~f~~~~~~~pf~~a~~~v~---~~~ 149 (281)
T 1t71_A 78 LD-----LAVVINKKDLVRPLNLDTSFAFHNLGQGSLVFEFNKAKIRITNLLGTSVPLPFKTTNPFKVLKELIL---KRD 149 (281)
T ss_dssp GG-----HHHHTTCTTEECBSCBCTTSTTTTSSBSEEEEECSSCEEEEEEEECTTSCCSSCBCCHHHHHHHHHT---TCC
T ss_pred cc-----HHHHhhhcCEEeeccCCcccccccCCCCeEEEEECCEEEEEEEeeccccccCccccCHHHHHHHHHh---hcC
Confidence 11 1112111 1 122211000 234566788887 4455554432122 11222444555555 236
Q ss_pred CCeEEEEEccccccCCCCCCCCcHHHHHHHHHHHHhcCCcEEEecccccceeeecccCCCcCCCCcEEEE
Q 012895 291 TPWIFVLLHAPWYNTNTAHQGEGESMRNSMEELLYNARVDVVFAGHVHAYERFTRIYDNKADPCGPIYIT 360 (454)
Q Consensus 291 ~~w~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~y~r~~~~~~~~~~~~g~~yi~ 360 (454)
.+.+|+..|.-. ....+.+... -..+||+|+.||+|....-..+ -++|+.|++
T Consensus 150 ~diIIv~~H~g~-----------t~Ek~~la~~-~dg~VD~VvGgHTHv~t~d~~i-----l~~gt~~i~ 202 (281)
T 1t71_A 150 CDLHIVDFHAET-----------TSEKNAFCMA-FDGYVTTIFGTHTHVPSADLRI-----TPKGSAYIT 202 (281)
T ss_dssp CSEEEEEEECSC-----------HHHHHHHHHH-HTTTSSEEEEESSSSCCTTCEE-----CTTSCEEES
T ss_pred CCEEEEEeCCCc-----------hHHHHHHHHh-CCCCeEEEEeCCCCcCCCceEE-----ecCCcEEEe
Confidence 778999999521 1122233321 2346999999999985432221 135788876
No 40
>3gve_A YFKN protein; alpha-beta-BETA-alpha sandwich, structural genomics, PSI-2, structure initiative; HET: CIT; 1.25A {Bacillus subtilis subsp}
Probab=98.28 E-value=8.4e-06 Score=79.39 Aligned_cols=186 Identities=13% Similarity=0.084 Sum_probs=89.9
Q ss_pred CCeEEEEEecCCCCCCh-----------------HHHHHHhhcCCCC-eEeecCccccCCCChhhHHHHh----------
Q 012895 146 FPIEFAIVGDLGQTEWT-----------------NSTLDHVGSKDYD-VFLLPGDLSYADFQQPLWDSFG---------- 197 (454)
Q Consensus 146 ~~~~f~~igD~~~~~~~-----------------~~~l~~i~~~~pd-~vl~~GDl~y~~~~~~~~~~~~---------- 197 (454)
..++|++.+|+|..-.. ...++++++..++ ++|.+||++..... ..|....
T Consensus 10 ~~l~Il~tnD~Hg~~~~~~~~~~~~~~~gG~ar~at~i~~~r~~~~~~llld~GD~~qGs~~-~~~~~~~~~~~g~~~g~ 88 (341)
T 3gve_A 10 VHLSILATTDIHANMMDYDYYSDKETADFGLARTAQLIQKHREQNPNTLLVDNGDLIQGNPL-GEYAVKYQKDDIISGTK 88 (341)
T ss_dssp EEEEEEEECCCTTCCSSEETTTTEECSSCCHHHHHHHHHHHHHHCSSEEEEECSCCSCSSHH-HHHHHHHHHHHHHHTSS
T ss_pred eEEEEEEEeccCCCccCccccCCCccccCCHHHHHHHHHHHHhcCCCEEEEecCccCCCcHH-HHHhhhccccccccccc
Confidence 35899999999864211 2345666655665 56789999964321 1111110
Q ss_pred --hhhhhhhcCCCeeecCCCcccCCCCCCCcchhhhhhhhccCCCCC------CCCC-CCceEEEEe-----C----e--
Q 012895 198 --RLVEPYASSRPWMVTEGNHEIESIPIILPHAFKAYNARWLMPYEE------SGSS-SNLYYSFDI-----A----G-- 257 (454)
Q Consensus 198 --~~~~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~p~~~------~~~~-~~~~ys~~~-----g----~-- 257 (454)
..++.+..--.=++++||||+..... .+..+.....+|.-. .+.. -..|.-++. + +
T Consensus 89 ~~~~~~~ln~lg~Da~tlGNHEfd~G~~----~L~~~~~~~~fp~l~aNv~~~~g~~~~~py~I~~~~~~~~~G~~~gvk 164 (341)
T 3gve_A 89 THPIISVMNALKYDAGTLGNHEFNYGLD----FLDGTIKGADFPIVNANVKTTSGENRYTPYVINEKTLIDENGNEQKVK 164 (341)
T ss_dssp CCHHHHHHHHTTCCBEECCGGGGTTCHH----HHHHHHHTCSSCEECSSEECTTSCBSSCCEEEEEEEEECTTSCEEEEE
T ss_pred ccHHHHHHHhhCCCeeeccchhhccCHH----HHHHHHHhcCCCEEEEeeECCCCCCccCCeEEEEEeeeccCCCcCCeE
Confidence 11222222223346799999964321 333333333333211 1111 122434454 2 4
Q ss_pred EEEEEecccCC--CC--------CCHHHHHHHHHHHHhhccCCCCeEEEEEccccccCCCCCCCCcHHHHHHHHHHHHhc
Q 012895 258 AHIIMLGSYTD--FD--------EDSAQYKWLKADLAKINRKKTPWIFVLLHAPWYNTNTAHQGEGESMRNSMEELLYNA 327 (454)
Q Consensus 258 v~fi~Lds~~~--~~--------~~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~ 327 (454)
+-||++-+... +. ....-.+.+++.+++.+.++.+.+|+++|...-........+. ....|.+-+ .
T Consensus 165 IgviG~t~~~~~~~~~~~~~~~~~~~d~~~~~~~~v~~Lk~~g~D~II~l~H~G~~~d~~~~~~e~--~~~~lA~~v--~ 240 (341)
T 3gve_A 165 VGYIGFVPPQIMTWDKKNLEGQVQVQDIVESANETIPKMKAEGADVIIALAHTGIEKQAQSSGAEN--AVFDLATKT--K 240 (341)
T ss_dssp EEEEEECCTTHHHHTHHHHTTTCEECCHHHHHHHHHHHHHHTTCSEEEEEECCCCCSSCCCTTCSS--CHHHHHHHC--S
T ss_pred EEEEEeccCcccccccccccCceEEcCHHHHHHHHHHHHHhcCCCEEEEEeccCccccccccccch--hHHHHHhcC--C
Confidence 45566644210 00 0011223344444444333577899999987632211111111 111222222 4
Q ss_pred CCcEEEecccccc
Q 012895 328 RVDVVFAGHVHAY 340 (454)
Q Consensus 328 ~v~lvl~GH~H~y 340 (454)
++|++|.||.|..
T Consensus 241 giD~IigGHsH~~ 253 (341)
T 3gve_A 241 GIDAIISGHQHGL 253 (341)
T ss_dssp CCCEEEECSSCCE
T ss_pred CCcEEEECCCCcc
Confidence 7999999999985
No 41
>2z06_A Putative uncharacterized protein TTHA0625; metal binding protein, structural genomics, NPPSFA; 2.20A {Thermus thermophilus} SCOP: d.159.1.10 PDB: 2cv9_A
Probab=98.28 E-value=1.9e-05 Score=72.88 Aligned_cols=181 Identities=16% Similarity=0.232 Sum_probs=95.3
Q ss_pred eEEEEEecCCCCCC---hHHHHHHhhcCCCCeEeecCccccCCCChhhHHHHhhhhhhhhcCCCeeecCCCcccCCCCCC
Q 012895 148 IEFAIVGDLGQTEW---TNSTLDHVGSKDYDVFLLPGDLSYADFQQPLWDSFGRLVEPYASSRPWMVTEGNHEIESIPII 224 (454)
Q Consensus 148 ~~f~~igD~~~~~~---~~~~l~~i~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~~ 224 (454)
+|++++||.=.... -...+.++++.. |++|..|..+..+.... ....+.+..+. +-++ +.||||++..
T Consensus 1 m~ilfiGDi~g~~G~~~v~~~l~~lr~~~-d~vi~ngen~~~G~g~~--~~~~~~l~~~G--~D~~-T~GNHefD~~--- 71 (252)
T 2z06_A 1 MRVLFIGDVMAEPGLRAVGLHLPDIRDRY-DLVIANGENAARGKGLD--RRSYRLLREAG--VDLV-SLGNHAWDHK--- 71 (252)
T ss_dssp CEEEEECCBCHHHHHHHHHHHHHHHGGGC-SEEEEECTTTTTTSSCC--HHHHHHHHHHT--CCEE-ECCTTTTSCT---
T ss_pred CEEEEEEecCCcccHHHHHHHHHHHHhhC-CEEEEeCCCccCCCCcC--HHHHHHHHhCC--CCEE-EeccEeeECc---
Confidence 58999999832211 134556666666 99888776665443211 22233333332 4454 7899999643
Q ss_pred Ccchhhhhhhhc--cCCCCC-CCCCCCceEEEEeCeEEEEEec--ccCCCCCCHHHHHHHHHHHHhhccCCCCeEEEEEc
Q 012895 225 LPHAFKAYNARW--LMPYEE-SGSSSNLYYSFDIAGAHIIMLG--SYTDFDEDSAQYKWLKADLAKINRKKTPWIFVLLH 299 (454)
Q Consensus 225 ~~~~~~~~~~~~--~~p~~~-~~~~~~~~ys~~~g~v~fi~Ld--s~~~~~~~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H 299 (454)
....|.+.. -.|.|- .+.+...|.-++.++.++-+++ ..........-.+-+++.+++.+ .+.+|+.+|
T Consensus 72 ---~l~~~l~~~~~vrpaN~~~~~pg~~~~i~~~~G~kIgVi~l~g~~~~~~~~~pf~~~~~~v~~lk---~d~IIv~~H 145 (252)
T 2z06_A 72 ---EVYALLESEPVVRPLNYPPGTPGKGFWRLEVGGESLLFVQVMGRIFMDPLDDPFRALDRLLEEEK---ADYVLVEVH 145 (252)
T ss_dssp ---THHHHHHHSSEECCTTSCSSCSSCSEEEEEETTEEEEEEEEECCTTSCCCCCHHHHHHHHHHHCC---CSEEEEEEE
T ss_pred ---hHHHHhccCCceEeecCCCCCCCCCeEEEEECCEEEEEEEcccccCccccCCHHHHHHHHHHHhC---CCEEEEEeC
Confidence 122222211 112221 1122356777888886655544 32211111222334555565553 567999999
Q ss_pred cccccCCCCCCCCcHHHHHHHHHHHHhcCCcEEEecccccceeeecccCCCcCCCCcEEEE
Q 012895 300 APWYNTNTAHQGEGESMRNSMEELLYNARVDVVFAGHVHAYERFTRIYDNKADPCGPIYIT 360 (454)
Q Consensus 300 ~P~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~y~r~~~~~~~~~~~~g~~yi~ 360 (454)
.-. ....+.+.. .-.-+||+|+.||+|....-..+ -++|+.|++
T Consensus 146 ~g~-----------tsek~~la~-~~dg~Vd~VvGgHTHv~t~d~~i-----l~~gt~~it 189 (252)
T 2z06_A 146 AEA-----------TSEKMALAH-YLDGRASAVLGTHTHVPTLDATR-----LPKGTLYQT 189 (252)
T ss_dssp CSC-----------HHHHHHHHH-HHBTTBSEEEEESSCSCBSCCEE-----CTTSCEEES
T ss_pred CCc-----------HHHHHHHHH-hCCCCeEEEEcCCCCcCCCccEE-----cCCCcEeec
Confidence 531 111222332 23346999999999984332222 246788876
No 42
>3c9f_A 5'-nucleotidase; 2',3'-cyclic phosphodiesterase, protein STR initiative, PSI-2, NEW YORK SGX research center for structu genomics, nysgxrc; 1.90A {Candida albicans} SCOP: d.114.1.1 d.159.1.2
Probab=98.17 E-value=3.3e-05 Score=80.10 Aligned_cols=183 Identities=18% Similarity=0.155 Sum_probs=89.4
Q ss_pred CCCeEEEEEecCCCCCC--------------hHHHHHHhh----cCCCCe-EeecCccccCCCChhhHH--HHhhhhhhh
Q 012895 145 NFPIEFAIVGDLGQTEW--------------TNSTLDHVG----SKDYDV-FLLPGDLSYADFQQPLWD--SFGRLVEPY 203 (454)
Q Consensus 145 ~~~~~f~~igD~~~~~~--------------~~~~l~~i~----~~~pd~-vl~~GDl~y~~~~~~~~~--~~~~~~~~l 203 (454)
...++|++++|+|.... ...+...++ +.+++. +|.+||++....... +. .-...++.+
T Consensus 13 ~~~l~ILhtnD~Hg~~~~~~~~~~~~~~~Gg~a~l~~~i~~~~~~~~~~~LlldaGD~~~Gs~~~~-~~~~~g~~~~~~l 91 (557)
T 3c9f_A 13 WNDINFVHTTDTHGWYSGHINQPLYHANWGDFISFTTHMRRIAHSRNQDLLLIDSGDRHDGNGLSD-ITSPNGLKSTPIF 91 (557)
T ss_dssp CCSEEEEEECCCTTCTTCCSSCGGGCCCHHHHHHHHHHHHHHHHHTTCEEEEEECSCCCSSCHHHH-SSSSTTTTTHHHH
T ss_pred ceEEEEEEEcccccCccCcccccccccccchHHHHHHHHHHHHHhcCCCEEEEecCCCCCCccchh-hcccCCHHHHHHH
Confidence 56799999999987421 112222332 367884 789999996432111 00 001122222
Q ss_pred hcCCCeeecCCCcccCCCCCCCcchhhhhhhhccCCCCCC--------CC---CCCceEEEEe--Ce--EEEEEecccCC
Q 012895 204 ASSRPWMVTEGNHEIESIPIILPHAFKAYNARWLMPYEES--------GS---SSNLYYSFDI--AG--AHIIMLGSYTD 268 (454)
Q Consensus 204 ~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~p~~~~--------~~---~~~~~ys~~~--g~--v~fi~Lds~~~ 268 (454)
..--.=++++||||+...... ...+....+....|.-.. +. ....|.-++. ++ +-||++.+...
T Consensus 92 n~lg~Da~tlGNHEfD~G~~~-l~~~~~~l~~a~fp~L~ANv~~~~~~g~~~~~~~py~I~e~~~~G~kIgiiGlt~~~~ 170 (557)
T 3c9f_A 92 IKQDYDLLTIGNHELYLWENS-KQEYETVVNHFQDKYVCSNVDIRLDNGLFVPLGLKYKYFTTPIRGIRVMAFGFLFDFK 170 (557)
T ss_dssp TTSCCSEECCCGGGSSSHHHH-HHHHHHHHHHTTTTBBCSSEEEECTTSCEEESSBSCEEEECTTTCCEEEEEECCCCCC
T ss_pred HhcCCCEEeecchhcccchHH-HHHHHHHHHhCCCCEEEeecccccccCCccccCCCeEEEEEccCCEEEEEEEeecCCC
Confidence 222234568999999542110 001211222223332211 10 1123556777 77 55566544211
Q ss_pred CC------CCHHH---HHHHHHHHHhhccCCCCeEEEEEccccccCCCCCCCCcHHHHHHHHHHHHh--cCCcE-EEecc
Q 012895 269 FD------EDSAQ---YKWLKADLAKINRKKTPWIFVLLHAPWYNTNTAHQGEGESMRNSMEELLYN--ARVDV-VFAGH 336 (454)
Q Consensus 269 ~~------~~~~Q---~~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~--~~v~l-vl~GH 336 (454)
.. ....+ .+|+++.+ +++.+.+|+++|.+.-... .. . ......+.+ .++|+ +|.||
T Consensus 171 ~~~~~~~~~d~~e~i~~~~v~~l~----~~~~D~IIvL~H~G~~~~~------d~-~-~~~~~~lA~~~~giDilIlgGH 238 (557)
T 3c9f_A 171 RFNSGTRVTPMAETIHEPWFQEAL----KHEVDLIIIVGHTPISHNW------GE-F-YQVHQYLRQFFPDTIIQYFGGH 238 (557)
T ss_dssp CCCTTEEECCHHHHTTSHHHHHHT----TSCCSEEEEECSSCCCTTT------CH-H-HHHHHHHHHHCTTSEEEEEECS
T ss_pred CCCCCcEECCHHHHHHHHHHHHHH----hcCCCEEEEecccCccccC------cc-c-cHHHHHHHHhCCCCCEEEECCC
Confidence 00 01111 13555433 2256789999998852000 11 1 222232333 47994 99999
Q ss_pred cccce
Q 012895 337 VHAYE 341 (454)
Q Consensus 337 ~H~y~ 341 (454)
.|...
T Consensus 239 tH~~~ 243 (557)
T 3c9f_A 239 SHIRD 243 (557)
T ss_dssp SCCEE
T ss_pred CCCCC
Confidence 99863
No 43
>3jyf_A 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'- nucleotidase bifunctional periplasmic...; APC63187.2; HET: EPE TAM; 2.43A {Klebsiella pneumoniae subsp}
Probab=97.97 E-value=5.3e-05 Score=73.59 Aligned_cols=185 Identities=16% Similarity=0.108 Sum_probs=89.0
Q ss_pred CCeEEEEEecCCCCCCh-----------------HHHHHHhhcCCCC-eEeecCccccCCCChhhHHHHh--------hh
Q 012895 146 FPIEFAIVGDLGQTEWT-----------------NSTLDHVGSKDYD-VFLLPGDLSYADFQQPLWDSFG--------RL 199 (454)
Q Consensus 146 ~~~~f~~igD~~~~~~~-----------------~~~l~~i~~~~pd-~vl~~GDl~y~~~~~~~~~~~~--------~~ 199 (454)
-.++|++.+|+|..-.. ...++++++..++ ++|..||++..... ..|.... ..
T Consensus 7 ~~l~Il~tnD~Hg~~~~~~~~~~~~~~~gG~ar~at~i~~~r~~~~n~llld~GD~~qGs~~-~~~~~~~~~~~g~~~p~ 85 (339)
T 3jyf_A 7 VDLRIMETTDLHSNMMDFDYYKDAATEKFGLVRTASLIEQARAEVKNSVLVDNGDVIQGSPL-GDYMAAKGLKEGDVHPV 85 (339)
T ss_dssp EEEEEEEECCCTTCCSSEETTTTEECSSCCHHHHHHHHHHHHHTCSCEEEEECSCCSSSSHH-HHHHHHHCCCTTCCCHH
T ss_pred eeEEEEEEeeCCCCcccccccCCCccccCCHHHHHHHHHHHHhhCCCEEEEECCCCCCCchh-HHhhhhcccccccchHH
Confidence 35889999999864211 2355666666666 67889999964321 1111110 11
Q ss_pred hhhhhcCCCeeecCCCcccCCCCCCCcchhhhhhhhccCCCCC-------CCCC-CCceEEEEe-----C----e--EEE
Q 012895 200 VEPYASSRPWMVTEGNHEIESIPIILPHAFKAYNARWLMPYEE-------SGSS-SNLYYSFDI-----A----G--AHI 260 (454)
Q Consensus 200 ~~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~p~~~-------~~~~-~~~~ys~~~-----g----~--v~f 260 (454)
++.+..--.=+.++||||+..... .+..+.+....|.-. .+.. -..|.-++. + + +-|
T Consensus 86 ~~~mn~lg~D~~t~GNHEfd~G~~----~l~~~~~~a~fp~l~aNv~~~~~g~~~~~py~I~~~~v~~~~G~~~gvkIgv 161 (339)
T 3jyf_A 86 YKAMNTLNYAVGNLGNHEFNYGLD----FLHKALAGAKFPYVNANIIDAKTGKPMFTPYLIQDTRVVDSDGQIHTLRIGY 161 (339)
T ss_dssp HHHHTTSCCSEEECCGGGGTTCHH----HHHHHHHTCSSCEECSSEEETTTSSBSSCCEEEEEEEEECTTSCEEEEEEEE
T ss_pred HHHHHhcCCCEEecchhhhhccHH----HHHHHHHhcCCceeeeeeeecCCCCcccCCeEEEEEEeeccCCCcCCeEEEE
Confidence 222222223356789999964321 233333332333211 1110 122434444 3 4 556
Q ss_pred EEecccCC--CC----CC----HHHHHHHHHHHHhhccCCCCeEEEEEccccccCCCCCCCCcHHHHHHHHHHHHh-cCC
Q 012895 261 IMLGSYTD--FD----ED----SAQYKWLKADLAKINRKKTPWIFVLLHAPWYNTNTAHQGEGESMRNSMEELLYN-ARV 329 (454)
Q Consensus 261 i~Lds~~~--~~----~~----~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~-~~v 329 (454)
|++-+..- +. .+ ..-.+-+++.+++.+.++.+.+|+++|...-........+.. . . ++.+ -++
T Consensus 162 iG~~~p~~~~~~~~~~~g~~~~~d~~e~~~~~v~~lr~~g~D~II~l~H~G~~~d~~~~~~en~--~-~---~~~~v~gI 235 (339)
T 3jyf_A 162 IGFVPPQIMTWDKANLNGKVTVNDITETARKYIPEMRAKGADVVVVVAHSGLSADPYQAMAENS--V-Y---YLSQVPGV 235 (339)
T ss_dssp EEECCTTHHHHTHHHHTTTEEECCHHHHHHHHHHHHHHTTCSEEEEEECCCCCCSCCCTTCSCC--H-H---HHTTSTTC
T ss_pred EecccCcccccccccccCCeEEcCHHHHHHHHHHHHHhcCCCEEEEEeccCccccccccccchh--H-H---HHhhCCCC
Confidence 66644210 00 00 111233344443333335778999999876221110001111 0 1 1222 479
Q ss_pred cEEEecccccce
Q 012895 330 DVVFAGHVHAYE 341 (454)
Q Consensus 330 ~lvl~GH~H~y~ 341 (454)
|++|.||.|...
T Consensus 236 D~IlgGHsH~~~ 247 (339)
T 3jyf_A 236 DAIMFGHAHAVF 247 (339)
T ss_dssp CEEEECSSCSEE
T ss_pred CEEEeCCCcccc
Confidence 999999999843
No 44
>4h1s_A 5'-nucleotidase; hydrolase; HET: NAG; 2.20A {Homo sapiens}
Probab=97.85 E-value=0.00018 Score=74.35 Aligned_cols=172 Identities=15% Similarity=0.165 Sum_probs=85.2
Q ss_pred CeEEEEEecCCCCCC---------------------hHHHHHHhhcCCCC-eEeecCccccCCCChhh--HHHHhhhhhh
Q 012895 147 PIEFAIVGDLGQTEW---------------------TNSTLDHVGSKDYD-VFLLPGDLSYADFQQPL--WDSFGRLVEP 202 (454)
Q Consensus 147 ~~~f~~igD~~~~~~---------------------~~~~l~~i~~~~pd-~vl~~GDl~y~~~~~~~--~~~~~~~~~~ 202 (454)
.++|++++|+|..-. ....++++++.+++ ++|.+||++........ .....+.+..
T Consensus 3 ~LtILhtnD~Hg~l~~~~~~~~~~~~~~~~~GG~arlat~i~~~r~~~~n~llldaGD~~qGs~~~~~~~g~~~i~~mN~ 82 (530)
T 4h1s_A 3 ELTILHTNDVHSRLEQTSEDSSKCVNASRCMGGVARLFTKVQQIRRAEPNVLLLDAGDQYQGTIWFTVYKGAEVAHFMNA 82 (530)
T ss_dssp EEEEEEECCCTTCCSCBCTTSSBCCSTTSCBCCHHHHHHHHHHHHHHCSSEEEEECSCCSCSSHHHHHHTTHHHHHHHHH
T ss_pred EEEEEEEcccccCCcccCcccccccccccccCcHHHHHHHHHHHHhhCcCeEEEEeCCcccchHHHHHhCChHHHHHHhc
Confidence 478999999985321 01345566666666 56779999975432111 1111122222
Q ss_pred hhcCCCeeecCCCcccCCCCCCCcchh-hhhhhhccCCCCCCC------------CCCCceEEEEeCeEE--EEEecccC
Q 012895 203 YASSRPWMVTEGNHEIESIPIILPHAF-KAYNARWLMPYEESG------------SSSNLYYSFDIAGAH--IIMLGSYT 267 (454)
Q Consensus 203 l~~~~P~~~v~GNHD~~~~~~~~~~~~-~~~~~~~~~p~~~~~------------~~~~~~ys~~~g~v~--fi~Lds~~ 267 (454)
+ -.=+.++||||+..... .+ ..+......|.-... ..-..|.-++.++++ ||++-+..
T Consensus 83 l---gyDa~~lGNHEFd~G~~----~l~~~~~~~a~fp~L~aNv~~~~~~~~~~~~~~~py~I~~~~g~kIgviGltt~~ 155 (530)
T 4h1s_A 83 L---RYDAMALGNHEFDNGVE----GLIEPLLKEAKFPILSANIKAKGPLASQISGLYLPYKVLPVGDEVVGIVGYTSKE 155 (530)
T ss_dssp T---TCCEEECCGGGGTTTTH----HHHTTTTTTCSSCEECTTEEECTTHHHHHTTTSBSEEEEEETTEEEEEEEEECTT
T ss_pred c---CCCEEEEchhhhccCHH----HHHHHHHhhCCCCEEEEeeeccCCcccccCCcccceEEEEeccEEEeeccccccc
Confidence 2 23356899999964322 11 112222222221110 001235667888754 55554321
Q ss_pred -----CCCCC---HHHHHHHHHHHHhhccCCCCeEEEEEccccccCCCCCCCCcHHHHHHHHHHHHhc-CCcEEEecccc
Q 012895 268 -----DFDED---SAQYKWLKADLAKINRKKTPWIFVLLHAPWYNTNTAHQGEGESMRNSMEELLYNA-RVDVVFAGHVH 338 (454)
Q Consensus 268 -----~~~~~---~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~-~v~lvl~GH~H 338 (454)
....+ ....+-+++.+++.+.++.+.+|++.|...- .... +.++. ++|+++.||.|
T Consensus 156 ~~~~~~~~~~~~f~d~v~~~~~~v~~Lr~~g~D~II~LsH~G~~------------~d~~---la~~v~giD~IlgGHsH 220 (530)
T 4h1s_A 156 TPFLSNPGTNLVFEDEITALQPEVDKLKTLNVNKIIALGHSGFE------------MDKL---IAQKVRGVDVVVGGHSN 220 (530)
T ss_dssp HHHHSCCCTTEEECCHHHHHHHHHHHHHHTTCCCEEEEEESCHH------------HHHH---HHHHSTTCCEEECCSSC
T ss_pred eeeeccCCCCcccCcHHHHHHHHHhhhhhcCCCEEEEeccCCch------------HHHH---HHhcCCCCCeeccCCcc
Confidence 00000 1122223333333222356779999997531 1112 23333 79999999999
Q ss_pred cc
Q 012895 339 AY 340 (454)
Q Consensus 339 ~y 340 (454)
..
T Consensus 221 ~~ 222 (530)
T 4h1s_A 221 TF 222 (530)
T ss_dssp CC
T ss_pred ce
Confidence 74
No 45
>2qjc_A Diadenosine tetraphosphatase, putative; putative diadenosine tetraphosphatase, monomer, PSI- 2, protein structure initiative, nysgrc; 2.05A {Trypanosoma brucei}
Probab=97.48 E-value=5.3e-05 Score=70.98 Aligned_cols=64 Identities=25% Similarity=0.208 Sum_probs=43.0
Q ss_pred eEEEEEecCCCCCC-hHHHHHHhhcCCC-CeEeecCccccCCCChhhHHHHhhhhhhhhcCCCeeecCCCccc
Q 012895 148 IEFAIVGDLGQTEW-TNSTLDHVGSKDY-DVFLLPGDLSYADFQQPLWDSFGRLVEPYASSRPWMVTEGNHEI 218 (454)
Q Consensus 148 ~~f~~igD~~~~~~-~~~~l~~i~~~~p-d~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~ 218 (454)
.|++++||+|.... ..++++.+....+ |.+|++||+++.+.... + ..+.+.. .+++++.||||.
T Consensus 19 ~~i~visDiHg~~~~l~~~l~~~~~~~~~d~ii~~GD~vd~g~~~~--~-~l~~l~~----~~~~~v~GNHd~ 84 (262)
T 2qjc_A 19 GRVIIVGDIHGCRAQLEDLLRAVSFKQGSDTLVAVGDLVNKGPDSF--G-VVRLLKR----LGAYSVLGNHDA 84 (262)
T ss_dssp SCEEEECCCTTCHHHHHHHHHHHTCCTTTSEEEECSCCSSSSSCHH--H-HHHHHHH----HTCEECCCHHHH
T ss_pred CeEEEEeCCCCCHHHHHHHHHHHhccCCCCEEEEecCCCCCCCCHH--H-HHHHHHH----CCCEEEeCcChH
Confidence 48999999995421 2345555555555 99999999998654322 1 2222222 479999999998
No 46
>2dfj_A Diadenosinetetraphosphatase; helices and strands mixture, hydrolase; 2.72A {Shigella flexneri 2A}
Probab=97.37 E-value=0.00012 Score=69.13 Aligned_cols=67 Identities=21% Similarity=0.213 Sum_probs=44.3
Q ss_pred eEEEEEecCCCCCC-hHHHHHHhhc-CCCCeEeecCccccCCCChhhHHHHhhhhhhhhcCCCeeecCCCcccC
Q 012895 148 IEFAIVGDLGQTEW-TNSTLDHVGS-KDYDVFLLPGDLSYADFQQPLWDSFGRLVEPYASSRPWMVTEGNHEIE 219 (454)
Q Consensus 148 ~~f~~igD~~~~~~-~~~~l~~i~~-~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~ 219 (454)
++++++||+|.... ...+++.+.. .++|.++++||+++.+.... ...+.+..+. .+++.+.||||..
T Consensus 1 M~i~vigDiHG~~~~l~~ll~~~~~~~~~d~~v~lGD~vdrG~~s~---~~l~~l~~l~--~~~~~v~GNHe~~ 69 (280)
T 2dfj_A 1 MATYLIGDVHGCYDELIALLHKVEFTPGKDTLWLTGDLVARGPGSL---DVLRYVKSLG--DSVRLVLGNHDLH 69 (280)
T ss_dssp -CEEEECCCCSCHHHHHHHHHHTTCCTTTCEEEECSCCSSSSSCHH---HHHHHHHHTG--GGEEECCCHHHHH
T ss_pred CeEEEEecCCCCHHHHHHHHHHhCCCCCCCEEEEeCCcCCCCCccH---HHHHHHHhCC--CceEEEECCCcHH
Confidence 47899999996532 2344555544 57899999999998665422 1223333332 3799999999973
No 47
>2edd_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.20 E-value=0.0024 Score=52.12 Aligned_cols=82 Identities=16% Similarity=0.090 Sum_probs=55.2
Q ss_pred CCCCCeeEEEEecCCCcEEEEEEeCCCCC--------ccEEEEeecCCCC--ceEEEeEeEEEeeeeeecCeEEEEEECC
Q 012895 50 SESDPQQVHISLAAKDYIRVSWITDDKEA--------ESVVEYGKLPGRY--NTVATGEHTSYQFFFYKSGKIHHVKIGP 119 (454)
Q Consensus 50 ~~~~p~~v~l~~~~~~~~~v~W~t~~~~~--------~~~v~y~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~g 119 (454)
....|..+++.....+++.|+|.....+. .-.|+|....... ...... ....++|+|
T Consensus 18 pp~~P~~l~~~~~s~tsi~lsW~~p~~~~~~i~~~~~~Y~v~y~~~~~~~~~~~~~~~-------------~~~~~~v~g 84 (123)
T 2edd_A 18 PMLPPVGVQAVALTHDAVRVSWADNSVPKNQKTSEVRLYTVRWRTSFSASAKYKSEDT-------------TSLSYTATG 84 (123)
T ss_dssp SSCCCEEEEEEEEETTEEEEEEECSSSCSSCCCSCCCCEEEEEEETTCTTCCCCCEEE-------------SSSEEEEES
T ss_pred CCCCCcceEEEEcCCCeEEEEecCCCCCcccccCcCceEEEEEEECCCCCccEEEEeC-------------CceEEEecC
Confidence 45678889988888999999999654222 4467787653211 111110 133578999
Q ss_pred CCCCCEEEEEeCc--------cCceeEEECCCC
Q 012895 120 LEPATTYYYRCGG--------RGPEFSFKMPPA 144 (454)
Q Consensus 120 L~p~t~Y~Yrv~~--------~s~~~~F~T~p~ 144 (454)
|+|+|.|.++|.. .+....|+|.+.
T Consensus 85 L~P~T~Y~f~V~A~n~~g~g~~S~~v~~~T~~~ 117 (123)
T 2edd_A 85 LKPNTMYEFSVMVTKNRRSSTWSMTAHATTYEA 117 (123)
T ss_dssp CCTTCEEEEEEEECCSSSCCCCCCCEEEECCCS
T ss_pred CCCCCEEEEEEEEeCCCcccCCCCCEEEEccCC
Confidence 9999999999853 356778888764
No 48
>2ede_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.20 E-value=0.0031 Score=50.12 Aligned_cols=85 Identities=18% Similarity=0.200 Sum_probs=55.1
Q ss_pred CCCCCeeEEEEec--CCCcEEEEEEeCCCCC----ccEEEEeecCCCC--ceEEEeEeEEEeeeeeecCeEEEEEECCCC
Q 012895 50 SESDPQQVHISLA--AKDYIRVSWITDDKEA----ESVVEYGKLPGRY--NTVATGEHTSYQFFFYKSGKIHHVKIGPLE 121 (454)
Q Consensus 50 ~~~~p~~v~l~~~--~~~~~~v~W~t~~~~~----~~~v~y~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~ 121 (454)
....|..+.+... ..+++.|.|....... .-.|+|....... ...... ...-...+.|++|+
T Consensus 8 P~~~P~~l~~~~~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~----------~~~~~~~~~i~~L~ 77 (114)
T 2ede_A 8 PTSAPKDLTVITREGKPRAVIVSWQPPLEANGKITAYILFYTLDKNIPIDDWIMET----------ISGDRLTHQIMDLN 77 (114)
T ss_dssp CCSCCEEEEEEECSSCSSCEEEEEECCSSCSSCCSEEEEEEESCSSSCTTTSEEEE----------EETTCCEEEECSCC
T ss_pred CCCCCcceEEEEccCCCCEEEEEECCCCCCCCceeEEEEEEEeCCCCCccceEEEE----------ECCCceEEEEcCCC
Confidence 3457888888877 5789999999875322 3466776543211 111110 11223457889999
Q ss_pred CCCEEEEEeCc--------cCceeEEECCCC
Q 012895 122 PATTYYYRCGG--------RGPEFSFKMPPA 144 (454)
Q Consensus 122 p~t~Y~Yrv~~--------~s~~~~F~T~p~ 144 (454)
|++.|.+||.. .+....|+|++.
T Consensus 78 p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 108 (114)
T 2ede_A 78 LDTMYYFRIQARNSKGVGPLSDPILFRTLKV 108 (114)
T ss_dssp SSCEEEEEEEEECSSCBCCCCCCEEEECCCS
T ss_pred CCCEEEEEEEEEeCCcCcCCcccEEEEecCC
Confidence 99999999953 356778888764
No 49
>2edy_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.20 E-value=0.00076 Score=52.64 Aligned_cols=80 Identities=15% Similarity=0.247 Sum_probs=50.2
Q ss_pred CCCCeeEEEEecCCCcEEEEEEeCC--CC----CccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCC
Q 012895 51 ESDPQQVHISLAAKDYIRVSWITDD--KE----AESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPAT 124 (454)
Q Consensus 51 ~~~p~~v~l~~~~~~~~~v~W~t~~--~~----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t 124 (454)
...|..+++.....+++.|.|.... .. ..-.|+|............+ -...+.|++|+|++
T Consensus 9 p~~P~~l~~~~~~~~si~l~W~~p~~~~~~g~i~~Y~i~~~~~~~~~~~~~~~-------------~~~~~~i~~L~p~t 75 (103)
T 2edy_A 9 SGFPQNLHVTGLTTSTTELAWDPPVLAERNGRIISYTVVFRDINSQQELQNIT-------------TDTRFTLTGLKPDT 75 (103)
T ss_dssp SCCCEEEECSSBCSSCEECEEECCCTTSCSSCCCEEEEEEEETTSCCEEEEEE-------------SSSCCEECSCCTTC
T ss_pred CCCCeeeEEEecCCCEEEEEECCCCCcCCCCcEeEEEEEEEECCCCccEEEcC-------------CcceEEEcCCCCCC
Confidence 3467777776666889999999872 11 23456676554422111111 12235789999999
Q ss_pred EEEEEeCc--------cCceeEEECCC
Q 012895 125 TYYYRCGG--------RGPEFSFKMPP 143 (454)
Q Consensus 125 ~Y~Yrv~~--------~s~~~~F~T~p 143 (454)
.|.+||.. .+....|+|.|
T Consensus 76 ~Y~~~V~A~n~~G~g~~S~~~~~~T~p 102 (103)
T 2edy_A 76 TYDIKVRAWTSKGSGPLSPSIQSRTMP 102 (103)
T ss_dssp CEEEECCEECSSCBCCCCCCCCCCCCC
T ss_pred EEEEEEEEECCCCCCCCCCCEEEEecc
Confidence 99999964 24556677765
No 50
>2ie4_C PP2A-alpha;, serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform; protein-protein complex, heat repeat, signaling protein; HET: OKA; 2.60A {Homo sapiens} SCOP: d.159.1.3 PDB: 2npp_C* 3dw8_C* 3k7v_C* 3k7w_C* 3c5w_C 2ie3_C* 3fga_C* 2iae_C* 3p71_C* 2nym_C* 2nyl_C*
Probab=97.06 E-value=0.00052 Score=65.58 Aligned_cols=70 Identities=16% Similarity=0.149 Sum_probs=45.8
Q ss_pred CeEEEEEecCCCCCCh-HHHHHHhhcCCCCeEeecCccccCCCChhhHHHHhhhhhhhhcC--CCeeecCCCcccC
Q 012895 147 PIEFAIVGDLGQTEWT-NSTLDHVGSKDYDVFLLPGDLSYADFQQPLWDSFGRLVEPYASS--RPWMVTEGNHEIE 219 (454)
Q Consensus 147 ~~~f~~igD~~~~~~~-~~~l~~i~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~~--~P~~~v~GNHD~~ 219 (454)
..++.++||+|..... .++++.+.....+.++++||+++.+....+ ....+..+... ..++.+.||||..
T Consensus 49 ~~~i~viGDIHG~~~~L~~ll~~~~~~~~~~~vflGD~VDRG~~s~e---vl~lL~~lk~~~p~~v~~lrGNHE~~ 121 (309)
T 2ie4_C 49 RCPVTVCGDVHGQFHDLMELFRIGGKSPDTNYLFMGDYVDRGYYSVE---TVTLLVALKVRYRERITILRGNHESR 121 (309)
T ss_dssp CSSEEEECCCTTCHHHHHHHHHHHCCTTTSCEEECSCCSSSSTTHHH---HHHHHHHHHHHCTTTEEECCCTTSST
T ss_pred cCCEEEEecCCCCHHHHHHHHHHcCCCCCCEEEEeCCccCCCCChHH---HHHHHHHHHhhCCCcEEEEeCCCCHH
Confidence 3569999999965322 344555555567889999999987654322 22333333222 3499999999985
No 51
>2z72_A Protein-tyrosine-phosphatase; cold-active enzyme, psychrophIle, hydrolase; 1.10A {Shewanella SP} PDB: 1v73_A 2zbm_A
Probab=97.05 E-value=0.00049 Score=66.91 Aligned_cols=72 Identities=13% Similarity=-0.038 Sum_probs=45.8
Q ss_pred CCCeEEEEEecCCCCCCh-HHHHHHhhc--------CCCCeEeecCccccCCCChhhHHHHhhhhhhhh-----cCCCee
Q 012895 145 NFPIEFAIVGDLGQTEWT-NSTLDHVGS--------KDYDVFLLPGDLSYADFQQPLWDSFGRLVEPYA-----SSRPWM 210 (454)
Q Consensus 145 ~~~~~f~~igD~~~~~~~-~~~l~~i~~--------~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~l~-----~~~P~~ 210 (454)
....+++++||+|..... ..+++.+.. .++|.++++||+++.+....+ ....+..+. ...+++
T Consensus 68 ~~~~~i~vigDiHG~~~~l~~ll~~~~~~~~~~~~~~~~d~~v~lGD~vdrG~~s~e---vl~~l~~l~~~~~~~~~~v~ 144 (342)
T 2z72_A 68 LGIKKVVALSDVHGQYDVLLTLLKKQKIIDSDGNWAFGEGHMVMTGDIFDRGHQVNE---VLWFMYQLDQQARDAGGMVH 144 (342)
T ss_dssp CCCCEEEEECCCTTCHHHHHHHHHHTTSBCTTSCBCCTTCEEEECSCCSSSSSCHHH---HHHHHHHHHHHHHHTTCEEE
T ss_pred cCCCCEEEEECCCCCHHHHHHHHHhcCCCcccccccCCCCEEEEECCCcCCCCCHHH---HHHHHHHHHHHHhhCCCeEE
Confidence 456899999999965322 233443321 157999999999986654321 222333332 224699
Q ss_pred ecCCCcccC
Q 012895 211 VTEGNHEIE 219 (454)
Q Consensus 211 ~v~GNHD~~ 219 (454)
.+.||||..
T Consensus 145 ~v~GNHE~~ 153 (342)
T 2z72_A 145 LLMGNHEQM 153 (342)
T ss_dssp ECCCHHHHH
T ss_pred EEecCCcHH
Confidence 999999984
No 52
>2haz_A N-CAM 1, neural cell adhesion molecule 1; fibronectin type III repeat, FN1, beta sandwich; 1.70A {Homo sapiens} SCOP: b.1.2.1
Probab=97.00 E-value=0.0048 Score=48.44 Aligned_cols=82 Identities=17% Similarity=0.153 Sum_probs=51.0
Q ss_pred CeeEEEEecCCCcEEEEEEeCCCC-----CccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEEE
Q 012895 54 PQQVHISLAAKDYIRVSWITDDKE-----AESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYYY 128 (454)
Q Consensus 54 p~~v~l~~~~~~~~~v~W~t~~~~-----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y 128 (454)
|..+.+.....+ +.|+|..+... ..-.|+|.......+...... .. ..+-...+.|++|+|+|.|.+
T Consensus 10 P~~~~~~~~~~~-v~l~W~~P~~~~G~pi~~Y~v~~~~~~~~~~~~~~~~---~~----~~~~~~~~~i~~L~p~t~Y~~ 81 (105)
T 2haz_A 10 PSIDQVEPYSST-AQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYD---AK----EASMEGIVTIVGLKPETTYAV 81 (105)
T ss_dssp CEEEEEEECSSC-EEEEEECCSCCTTSCCCEEEEEEEETTCCCCEEEEEE---HH----HHHHHSEEEECSCCTTCEEEE
T ss_pred CCCCEEEEcCCc-EEEEEcCCcccCCccccEEEEEEEECCCCCCccceEE---cc----ccCCccEEEECCCCCCCEEEE
Confidence 777777766666 99999987432 123577766543322111000 00 111234567999999999999
Q ss_pred EeCc--------cCceeEEECCC
Q 012895 129 RCGG--------RGPEFSFKMPP 143 (454)
Q Consensus 129 rv~~--------~s~~~~F~T~p 143 (454)
||.. .+....|+|.|
T Consensus 82 rV~A~n~~G~g~~S~~~~~~T~p 104 (105)
T 2haz_A 82 RLAALNGKGLGEISAASEFKTQP 104 (105)
T ss_dssp EEEEEETTEECCCCCCEEEECCC
T ss_pred EEEEEcCCccCCCcCCEeeEEec
Confidence 9963 35677899877
No 53
>1x5f_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=96.99 E-value=0.0072 Score=48.39 Aligned_cols=83 Identities=25% Similarity=0.335 Sum_probs=54.8
Q ss_pred CCCeeEEEEecCCCcEEEEEEeCC-CC----CccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEE
Q 012895 52 SDPQQVHISLAAKDYIRVSWITDD-KE----AESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTY 126 (454)
Q Consensus 52 ~~p~~v~l~~~~~~~~~v~W~t~~-~~----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y 126 (454)
..|..+++.....+++.|.|.... .. ..-.|+|.......+.... ....-...+.|++|+|+|.|
T Consensus 19 ~~P~~l~~~~~~~~sv~l~W~~p~~~~~g~i~~Y~v~~~~~~~~~~~~~~----------~~~~~~~~~~i~~L~p~t~Y 88 (120)
T 1x5f_A 19 SAPRDVVASLVSTRFIKLTWRTPASDPHGDNLTYSVFYTKEGIARERVEN----------TSHPGEMQVTIQNLMPATVY 88 (120)
T ss_dssp CCCEEEEEEEECSSCEEEEEECCSSCSSCCSSEEEEEEEETTCCCCEEEE----------CSSTTCSEEEECSCCTTCEE
T ss_pred CCCCCcEEEecCCCEEEEEECCCCCCCCCcEEEEEEEEEECCCCCceEEE----------eccCCccEEEeCCCCCCCEE
Confidence 467888888777899999998874 22 2346777665432221110 01122445789999999999
Q ss_pred EEEeCc--------cCceeEEECCCC
Q 012895 127 YYRCGG--------RGPEFSFKMPPA 144 (454)
Q Consensus 127 ~Yrv~~--------~s~~~~F~T~p~ 144 (454)
.+||.. .+....|+|.+.
T Consensus 89 ~~~V~A~n~~G~g~~S~~~~~~T~~~ 114 (120)
T 1x5f_A 89 IFRVMAQNKHGSGESSAPLRVETQPE 114 (120)
T ss_dssp EEEEEEECSSCEEEECCCEEEECCCC
T ss_pred EEEEEEECCCccCCCCCCEEEEeCCC
Confidence 999963 256677888654
No 54
>1x5j_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=96.94 E-value=0.0023 Score=51.37 Aligned_cols=83 Identities=14% Similarity=0.105 Sum_probs=53.0
Q ss_pred CCCCeeEEEEecCCCcEEEEEEeCCCCC--------ccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCC
Q 012895 51 ESDPQQVHISLAAKDYIRVSWITDDKEA--------ESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEP 122 (454)
Q Consensus 51 ~~~p~~v~l~~~~~~~~~v~W~t~~~~~--------~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p 122 (454)
...|..|++.....+++.|+|.-..... .-.|+|.......... .. ...-...++|+||+|
T Consensus 9 p~~P~~l~~~~~s~tsi~lsW~~p~~~~~~~~~~~~~Y~v~y~~~~~~~~~~--------~~---~~~~~~~~~i~gL~P 77 (113)
T 1x5j_A 9 MMPPVGVQASILSHDTIRITWADNSLPKHQKITDSRYYTVRWKTNIPANTKY--------KN---ANATTLSYLVTGLKP 77 (113)
T ss_dssp CCCCEEEEEEEEETTEEEEEEECTTSCSSSCCCSSCEEEEEECBSSSSSCCC--------EE---CCBCSSEEEEESCCT
T ss_pred CCCCcceEEEEecCCEEEEEecCCCCccccccCcCceEEEEEEECCCCCeEE--------EE---EecCcCEEEeCCCCC
Confidence 4578889988888999999998764321 3456676531111100 00 111233578999999
Q ss_pred CCEEEEEeCc--------cCceeEEECCCC
Q 012895 123 ATTYYYRCGG--------RGPEFSFKMPPA 144 (454)
Q Consensus 123 ~t~Y~Yrv~~--------~s~~~~F~T~p~ 144 (454)
+|.|.++|.. .+....++|.+.
T Consensus 78 ~T~Y~f~V~A~~~~G~g~~S~~v~~~T~~~ 107 (113)
T 1x5j_A 78 NTLYEFSVMVTKGRRSSTWSMTAHGTTFEL 107 (113)
T ss_dssp TCEECCEEEEECSSCBCCCCCCCCEECCCS
T ss_pred CcEEEEEEEEecCCccCCCcccEEeeccCC
Confidence 9999999863 345667777653
No 55
>1x4y_A Biregional cell adhesion molecule-related/DOWN- regulated oncogenes (CDON)binding...; fibronectin type III, FN3; NMR {Mus musculus} SCOP: b.1.2.1
Probab=96.93 E-value=0.0054 Score=48.89 Aligned_cols=83 Identities=12% Similarity=0.083 Sum_probs=53.2
Q ss_pred CCCCeeEEEEecCCCcEEEEEEeCCC------CCccEEEEeecCCC---CceEEEeEeEEEeeeeeecCeEEEEEECCCC
Q 012895 51 ESDPQQVHISLAAKDYIRVSWITDDK------EAESVVEYGKLPGR---YNTVATGEHTSYQFFFYKSGKIHHVKIGPLE 121 (454)
Q Consensus 51 ~~~p~~v~l~~~~~~~~~v~W~t~~~------~~~~~v~y~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~ 121 (454)
...|..+.+.....+++.|.|..... ...-.|+|...... ...... ..+-...++|++|+
T Consensus 9 ~~~P~~~~~~~~~~~si~l~W~~p~~~~~~g~i~gY~v~y~~~~~~~~~~~~~~~-----------~~~~~~~~~i~~L~ 77 (114)
T 1x4y_A 9 VAGPYITFTDAVNETTIMLKWMYIPASNNNTPIHGFYIYYRPTDSDNDSDYKKDM-----------VEGDRYWHSISHLQ 77 (114)
T ss_dssp CSCCEEEEEECSSSSCEEEEEECCCTTSCCCCCCEEEEEECCTTSCSGGGCCCEE-----------EETTCCEEEECSCC
T ss_pred CCCCeEEEEEecCCCEEEEEEeCCCchhcCCccceEEEEEEECCCCCCcceeeEe-----------cCCcEeEEEcCCCC
Confidence 35677788877778999999998741 12246667554332 111000 01112357899999
Q ss_pred CCCEEEEEeCc--------cCceeEEECCCC
Q 012895 122 PATTYYYRCGG--------RGPEFSFKMPPA 144 (454)
Q Consensus 122 p~t~Y~Yrv~~--------~s~~~~F~T~p~ 144 (454)
|+|.|.+||.. .+....|+|++.
T Consensus 78 p~t~Y~~~V~A~n~~G~g~~S~~v~~~T~~~ 108 (114)
T 1x4y_A 78 PETSYDIKMQCFNEGGESEFSNVMICETKAR 108 (114)
T ss_dssp TTCEEEEEEEEECTTCCCCCCCCEEEECCCC
T ss_pred CCCEEEEEEEEEcCCccCCCcCCEEEEeCCC
Confidence 99999999953 356778888764
No 56
>2djs_A Ephrin type-B receptor 1; tyrosine-protein kinase receptor EPH-2, NET, HEK6, ELK, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=96.93 E-value=0.0034 Score=49.44 Aligned_cols=81 Identities=14% Similarity=0.201 Sum_probs=51.4
Q ss_pred CCeeEEEEecCCCcEEEEEEeCCCCC----ccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEEE
Q 012895 53 DPQQVHISLAAKDYIRVSWITDDKEA----ESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYYY 128 (454)
Q Consensus 53 ~p~~v~l~~~~~~~~~v~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y 128 (454)
.|..+++.....+++.|.|.-+.... .-.|+|............. ..-...+.|++|+|++.|.+
T Consensus 10 ~P~~l~~~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~-----------~~~~~~~~l~~L~p~t~Y~~ 78 (108)
T 2djs_A 10 TVPIMHQVSATMRSITLSWPQPEQPNGIILDYEIRYYEKEHNEFNSSMA-----------RSQTNTARIDGLRPGMVYVV 78 (108)
T ss_dssp CCSCCEEEEECSSEEEEECCCCSCCSSCEEEEEEEEEETTSCSTTCEEE-----------EESSSEEEEESCCTTCEEEE
T ss_pred CCcceEEEecCCCEEEEEECCCCCCCCeEEEEEEEEEECCCCCcceeEE-----------ecCccEEEEcCCCCCCEEEE
Confidence 45566677667889999998875432 2345565544321111100 01123467899999999999
Q ss_pred EeCc--------cCceeEEECCCC
Q 012895 129 RCGG--------RGPEFSFKMPPA 144 (454)
Q Consensus 129 rv~~--------~s~~~~F~T~p~ 144 (454)
||.. .+....|+|+++
T Consensus 79 ~V~A~n~~G~g~~S~~~~~~T~~~ 102 (108)
T 2djs_A 79 QVRARTVAGYGKFSGKMCFQTLTD 102 (108)
T ss_dssp EEEEEESSCEEEECCCEEEECCCS
T ss_pred EEEEEeCCEECCCCCCEEEEeCCC
Confidence 9963 356778999875
No 57
>1fjm_A Protein serine/threonine phosphatase-1 (alpha ISO 1); hydrolase, toxin, hydrolase-hydrolase inhibitor complex; HET: 1ZN; 2.10A {Oryctolagus cuniculus} SCOP: d.159.1.3
Probab=96.92 E-value=0.00082 Score=64.70 Aligned_cols=69 Identities=20% Similarity=0.221 Sum_probs=45.0
Q ss_pred eEEEEEecCCCCCCh-HHHHHHhhcCCCCeEeecCccccCCCChhhHHHHhhhhhhhhc--CCCeeecCCCcccC
Q 012895 148 IEFAIVGDLGQTEWT-NSTLDHVGSKDYDVFLLPGDLSYADFQQPLWDSFGRLVEPYAS--SRPWMVTEGNHEIE 219 (454)
Q Consensus 148 ~~f~~igD~~~~~~~-~~~l~~i~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~--~~P~~~v~GNHD~~ 219 (454)
.++.++||+|..... ..+++.+.....+-+|++||+++.+....+ ...++..+.. .-.++.+.||||..
T Consensus 57 ~~i~viGDIHG~~~~L~~ll~~~g~~~~~~~vflGD~VDRG~~s~e---vl~lL~~lk~~~p~~v~~lrGNHE~~ 128 (330)
T 1fjm_A 57 APLKICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLE---TICLLLAYKIKYPENFFLLRGNHECA 128 (330)
T ss_dssp SSEEEECBCTTCHHHHHHHHHHHCSTTSSCEEECSCCSSSSSCHHH---HHHHHHHHHHHSTTTEEECCCTTSSH
T ss_pred CceEEecCCCCCHHHHHHHHHHhCCCCcceEEeCCCcCCCCCChHH---HHHHHHHhhhhcCCceEEecCCchHh
Confidence 468999999976422 345555555567889999999987654321 2233333321 23589999999974
No 58
>1x4x_A Fibronectin type-III domain containing protein 3A; FN3, immunoglobulin-like beta- sandwich fold, KIAA0970, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=96.90 E-value=0.0026 Score=50.11 Aligned_cols=79 Identities=23% Similarity=0.350 Sum_probs=49.2
Q ss_pred CCeeEEEEecCCCcEEEEEEeCCCCC----ccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEEE
Q 012895 53 DPQQVHISLAAKDYIRVSWITDDKEA----ESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYYY 128 (454)
Q Consensus 53 ~p~~v~l~~~~~~~~~v~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y 128 (454)
.|..+.+.....+++.|.|......+ .-.|+|............+ ....+.|++|+|+|.|.|
T Consensus 10 ~P~~~~~~~~s~~sv~l~W~~p~~~g~~i~~Y~v~~~~~~~~~~~~~~~-------------~~~~~~v~~L~p~t~Y~f 76 (106)
T 1x4x_A 10 QCKPPQVTCRSATCAQVNWEVPLSNGTDVTEYRLEWGGVEGSMQICYCG-------------PGLSYEIKGLSPATTYYC 76 (106)
T ss_dssp CCCCCCCEEEETTEEEEECCCCSCSSSCCCEEEEEEESSTTSCCEEEEE-------------SCSEEEEESCCSSCEEEE
T ss_pred CCCCCEEEEcCCCEEEEEEcCCCCCCCcceEEEEEEEcCCCceEEEEeC-------------CcceEEEcCCCCCCEEEE
Confidence 34445566556889999998775322 2356666543222111111 112467899999999999
Q ss_pred EeCc--------cCceeEEECCCC
Q 012895 129 RCGG--------RGPEFSFKMPPA 144 (454)
Q Consensus 129 rv~~--------~s~~~~F~T~p~ 144 (454)
||.. .+....|+|++.
T Consensus 77 rV~A~n~~G~g~~S~~v~~~T~~~ 100 (106)
T 1x4x_A 77 RVQALSVVGAGPFSEVVACVTPPS 100 (106)
T ss_dssp EEEEECSSCCCCBCCCEEEECCCC
T ss_pred EEEEEcCCcCCCCcCCEEEECCCC
Confidence 9863 356778888764
No 59
>2ed8_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.89 E-value=0.0082 Score=46.94 Aligned_cols=78 Identities=9% Similarity=0.028 Sum_probs=51.7
Q ss_pred CCeeEEEEecCCCcEEEEEEeCCCC----CccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEEE
Q 012895 53 DPQQVHISLAAKDYIRVSWITDDKE----AESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYYY 128 (454)
Q Consensus 53 ~p~~v~l~~~~~~~~~v~W~t~~~~----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y 128 (454)
.|..+++.....+++.|.|...... ..-.|+|............ .. ...+.|++|+|+|.|.+
T Consensus 10 ~P~~l~~~~~~~~si~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~-----------~~--~~~~~i~~L~p~t~Y~~ 76 (106)
T 2ed8_A 10 PVENLQAVSTSPTSILITWEPPAYANGPVQGYRLFCTEVSTGKEQNIE-----------VD--GLSYKLEGLKKFTEYSL 76 (106)
T ss_dssp CCEEEEEECSSTTEEEEEEECCSSCSSCCCEEEEEEEETTTCCEEEEE-----------EC--SSCEEEESCCTTCEEEE
T ss_pred CCceeEEEecCCCEEEEEECCCCCCCCCeeEEEEEEEECCCCceEEEe-----------CC--ccEEEECCCCCCCEEEE
Confidence 6788888877789999999977422 2346667655433221111 11 23467899999999999
Q ss_pred EeCc--------cCceeEEECCC
Q 012895 129 RCGG--------RGPEFSFKMPP 143 (454)
Q Consensus 129 rv~~--------~s~~~~F~T~p 143 (454)
||.. .+....|+|.+
T Consensus 77 ~V~A~n~~G~g~~S~~~~~~T~~ 99 (106)
T 2ed8_A 77 RFLAYNRYGPGVSTDDITVVTLS 99 (106)
T ss_dssp EEEEECSSCEEEECCCEEEECCC
T ss_pred EEEEEeCCccCCCcCCEEEEcCC
Confidence 9963 24567788854
No 60
>2dm4_A Sortilin-related receptor; beta-sandwich, sorting protein-related receptor containing LDLR class A repeats, sorla; NMR {Homo sapiens}
Probab=96.87 E-value=0.011 Score=46.40 Aligned_cols=79 Identities=19% Similarity=0.228 Sum_probs=51.2
Q ss_pred CCCeeEEEEec--CCCcEEEEEEeCCCCCc----cEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCE
Q 012895 52 SDPQQVHISLA--AKDYIRVSWITDDKEAE----SVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATT 125 (454)
Q Consensus 52 ~~p~~v~l~~~--~~~~~~v~W~t~~~~~~----~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~ 125 (454)
..|..+.+... ..+++.|.|.-...... -.|+|.......+.... .. ...+.|++|+|+|.
T Consensus 9 ~~P~~l~~~~~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~-----------~~--~~~~~l~~L~p~t~ 75 (108)
T 2dm4_A 9 DAPRNLQLSLPREAEGVIVGHWAPPIHTHGLIREYIVEYSRSGSKMWASQR-----------AA--SNFTEIKNLLVNTL 75 (108)
T ss_dssp TSCEEEEEECCTTCSSCEEEEEECCSCCSSCEEEEEEEEEETTCSCCEEEE-----------ES--SSEEEECSCCSSCE
T ss_pred cCCcCeEEEEeccCCCEEEEEEcCCCCCCCcEEEEEEEEEECCCCCeEEec-----------CC--ccEEEeCCCCCCCE
Confidence 36778877763 47899999998753222 35556655432222211 11 12578999999999
Q ss_pred EEEEeCc--------cCceeEEECCC
Q 012895 126 YYYRCGG--------RGPEFSFKMPP 143 (454)
Q Consensus 126 Y~Yrv~~--------~s~~~~F~T~p 143 (454)
|.+||.. .+....|+|.+
T Consensus 76 Y~~~V~A~n~~G~g~~S~~~~~~T~~ 101 (108)
T 2dm4_A 76 YTVRVAAVTSRGIGNWSDSKSITTIK 101 (108)
T ss_dssp EEEEEEEEESSCEEEECCCEEEECCS
T ss_pred EEEEEEEECCCceeCCCCCEEEECCC
Confidence 9999963 35667788854
No 61
>1x5l_A Ephrin type-A receptor 8; FN3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=96.76 E-value=0.0063 Score=47.97 Aligned_cols=81 Identities=11% Similarity=0.197 Sum_probs=50.6
Q ss_pred CCeeEEEEecCCCcEEEEEEeCCCC----CccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEEE
Q 012895 53 DPQQVHISLAAKDYIRVSWITDDKE----AESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYYY 128 (454)
Q Consensus 53 ~p~~v~l~~~~~~~~~v~W~t~~~~----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y 128 (454)
.|..+++.....+++.|.|...... ..-.|+|............. ..-...+.|++|+|++.|.+
T Consensus 13 ~P~~l~~~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~-----------~~~~~~~~i~~L~p~t~Y~~ 81 (111)
T 1x5l_A 13 QVVVIRQERAGQTSVSLLWQEPEQPNGIILEYEIKYYEKDKEMQSYSTL-----------KAVTTRATVSGLKPGTRYVF 81 (111)
T ss_dssp CCCCEECSCBCSSCEEEEECCCSCCCSCCCEEEEEEEESSSCCSSCEEE-----------EESSSEEEECSCCTTCEEEE
T ss_pred CCceEEEEEcCCCEEEEEECCCCCCCCEEEEEEEEEEECCCCceeEEEe-----------cCCCCEEEEcCCCCCCEEEE
Confidence 3555555555588999999876432 23456676554211111100 01123567899999999999
Q ss_pred EeCc--------cCceeEEECCCC
Q 012895 129 RCGG--------RGPEFSFKMPPA 144 (454)
Q Consensus 129 rv~~--------~s~~~~F~T~p~ 144 (454)
||.. .+....|+|++.
T Consensus 82 ~V~A~n~~G~g~~S~~~~~~T~~~ 105 (111)
T 1x5l_A 82 QVRARTSAGCGRFSQAMEVETGKP 105 (111)
T ss_dssp CEEEEETTEECCCCCCEEEECCCT
T ss_pred EEEEEeCCcCCCCcccEEEEcCCC
Confidence 9963 357788999875
No 62
>3icf_A PPT, serine/threonine-protein phosphatase T; IRO metalloprotein, structural genomics, PSI-2, protein structu initiative; 2.30A {Saccharomyces cerevisiae}
Probab=96.75 E-value=0.0021 Score=61.79 Aligned_cols=72 Identities=15% Similarity=0.214 Sum_probs=45.6
Q ss_pred CCCeEEEEEecCCCCCCh-HHHHHHhhcCCC-CeEeecCccccCCCChhhHHHHhhhhhhhhc--CCCeeecCCCcccC
Q 012895 145 NFPIEFAIVGDLGQTEWT-NSTLDHVGSKDY-DVFLLPGDLSYADFQQPLWDSFGRLVEPYAS--SRPWMVTEGNHEIE 219 (454)
Q Consensus 145 ~~~~~f~~igD~~~~~~~-~~~l~~i~~~~p-d~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~--~~P~~~v~GNHD~~ 219 (454)
....|++++||+|..... .++++.+..... +.+|++||+++.+....+ ....+..+.. ...++.+.||||..
T Consensus 61 ~~~~ri~viGDIHG~~~~L~~ll~~~g~~~~~~~~vflGD~VDRG~~s~e---vl~lL~~lk~~~p~~v~llrGNHE~~ 136 (335)
T 3icf_A 61 TPDVKISVCGDTHGQFYDVLNLFRKFGKVGPKHTYLFNGDFVDRGSWSCE---VALLFYCLKILHPNNFFLNRGNHESD 136 (335)
T ss_dssp STTCEEEEECCCTTCHHHHHHHHHHHCCCBTTEEEEECSCCSSSSTTHHH---HHHHHHHHHHHCTTTEEECCCTTSSH
T ss_pred ccCceEEEEecCCCCHHHHHHHHHHcCCCCCCcEEEEeCCccCCCcChHH---HHHHHHHHhhhCCCcEEEecCchhhh
Confidence 467899999999976432 344555543333 469999999987654321 1222222221 24589999999963
No 63
>2ee2_A Contactin-1; neural cell surface protein F3, glycoprotein GP135, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.70 E-value=0.01 Score=47.56 Aligned_cols=85 Identities=15% Similarity=0.210 Sum_probs=52.8
Q ss_pred CCCCeeEEEEecCCCcEEEEEEeCCC--CCccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEEE
Q 012895 51 ESDPQQVHISLAAKDYIRVSWITDDK--EAESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYYY 128 (454)
Q Consensus 51 ~~~p~~v~l~~~~~~~~~v~W~t~~~--~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y 128 (454)
...|..+++.....+++.|.|..... ...-.|+|............ .. ..+-...+.|++|+|+|.|.+
T Consensus 19 ~~~P~~l~~~~~~~~sv~l~W~~p~~g~i~~Y~v~~~~~~~~~~~~~~-----~~----~~~~~~~~~i~~L~p~t~Y~~ 89 (119)
T 2ee2_A 19 SEAPTEVGVKVLSSSEISVHWEHVLEKIVESYQIRYWAAHDKEEAANR-----VQ----VTSQEYSARLENLLPDTQYFI 89 (119)
T ss_dssp CCCCCSCEEEEEETTEEEEECCCCSCTTCCEEEEEEEESSSCGGGCEE-----EE----EETTCSEEEECSCCTTCEEEE
T ss_pred CCCCCcEEEEEccCCEEEEEecCCCCCccceEEEEEEECCCcccCcEE-----EE----cCCCEeEEEECCCCCCCEEEE
Confidence 34566777777678999999988743 22346667654322111000 00 111234578999999999999
Q ss_pred EeCc--------cCceeEEECCCC
Q 012895 129 RCGG--------RGPEFSFKMPPA 144 (454)
Q Consensus 129 rv~~--------~s~~~~F~T~p~ 144 (454)
||.. .+....|+|.+.
T Consensus 90 ~V~A~n~~G~g~~S~~~~~~T~~~ 113 (119)
T 2ee2_A 90 EVGACNSAGCGPPSDMIEAFTKKA 113 (119)
T ss_dssp EEEEECSSSCCCCCCCEEEECCCC
T ss_pred EEEEEcCCccCCCCCCEEEECCCC
Confidence 9953 355677888653
No 64
>1x5g_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=96.68 E-value=0.005 Score=49.00 Aligned_cols=80 Identities=16% Similarity=0.175 Sum_probs=52.2
Q ss_pred CCCeeEEEEecCCCcEEEEEEeCCCC----CccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEE
Q 012895 52 SDPQQVHISLAAKDYIRVSWITDDKE----AESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYY 127 (454)
Q Consensus 52 ~~p~~v~l~~~~~~~~~v~W~t~~~~----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~ 127 (454)
..|..+++.....+++.|.|...... ..-.|+|.......+..... ....+.|++|+|+|.|.
T Consensus 19 ~~P~~l~~~~~~~~si~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~-------------~~~~~~i~~L~p~t~Y~ 85 (116)
T 1x5g_A 19 GPAPNLRAYAASPTSITVTWETPVSGNGEIQNYKLYYMEKGTDKEQDVDV-------------SSHSYTINGLKKYTEYS 85 (116)
T ss_dssp CCCSSCEEEEEETTEEEEECCCCSCCSSCCSEEEEEEEETTCCCCCCEEE-------------CSSEEEECSCCTTCEEE
T ss_pred cCCCccEEEecCCCEEEEEEeCCCCCCCcccEEEEEEEECCCCccEEEec-------------CCceEEEcCCCCCCEEE
Confidence 35667777777789999999876422 23467776654332211111 12356789999999999
Q ss_pred EEeCc--------cCceeEEECCCC
Q 012895 128 YRCGG--------RGPEFSFKMPPA 144 (454)
Q Consensus 128 Yrv~~--------~s~~~~F~T~p~ 144 (454)
+||.. .+....|+|.+.
T Consensus 86 ~~V~A~n~~G~g~~S~~~~~~T~~~ 110 (116)
T 1x5g_A 86 FRVVAYNKHGPGVSTPDVAVRTLSD 110 (116)
T ss_dssp EEEEEECSSCCCCBCCCCCEECCCS
T ss_pred EEEEEEcCCCcCCCCCCEEEECCCC
Confidence 99853 245667888653
No 65
>2dle_A Receptor-type tyrosine-protein phosphatase ETA; protein-tyrosine phosphatase ETA, R-PTP-ETA, HPTP ETA, protein-tyrosine phosphatase receptor type J; NMR {Homo sapiens}
Probab=96.64 E-value=0.017 Score=45.45 Aligned_cols=78 Identities=13% Similarity=0.103 Sum_probs=48.7
Q ss_pred CCCeeEEEEecCCCcEEEEEEeCCCCC----ccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEE
Q 012895 52 SDPQQVHISLAAKDYIRVSWITDDKEA----ESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYY 127 (454)
Q Consensus 52 ~~p~~v~l~~~~~~~~~v~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~ 127 (454)
..|..+++.....+++.++|.....+. .-.|.|..... ..... .-...++|+||+|||.|.
T Consensus 9 s~v~~l~v~~~t~~Sv~LsW~~p~~~~~~i~~Y~v~~~~~~~--~~~~~-------------~~~t~~~i~gL~PgT~Y~ 73 (104)
T 2dle_A 9 IQVFDVTAVNISATSLTLIWKVSDNESSSNYTYKIHVAGETD--SSNLN-------------VSEPRAVIPGLRSSTFYN 73 (104)
T ss_dssp CBEEEEEEEEECSSCEEEEEEESCSTTCCSCEEEEEEECSSC--EEEEE-------------ESSSEEECCSCCSSCEEE
T ss_pred CCCceEEEEEeecCEEEEEEcCCCCCCCceEEEEEEEECCCC--eEEEc-------------CCCCEEEECCCCCCCEEE
Confidence 345566776666899999998764332 24566653311 01100 112457899999999999
Q ss_pred EEeCc-------cCceeEEECCCC
Q 012895 128 YRCGG-------RGPEFSFKMPPA 144 (454)
Q Consensus 128 Yrv~~-------~s~~~~F~T~p~ 144 (454)
++|.. .+....++|.|.
T Consensus 74 ~~V~A~~~~~~~~p~~~~~~T~p~ 97 (104)
T 2dle_A 74 ITVCPVLGDIEGTPGFLQVHTPPV 97 (104)
T ss_dssp EEEEEESSSCCCBCEEEEEECCCC
T ss_pred EEEEEEECCcccCCeeEEEEccCC
Confidence 99863 133556778764
No 66
>2dkm_A Collagen alpha-1(XX) chain; FN3 domain, KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.63 E-value=0.0067 Score=47.60 Aligned_cols=83 Identities=12% Similarity=0.232 Sum_probs=51.2
Q ss_pred CCCeeEEEEecCCCcEEEEEEeCCCCCccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEEEEeC
Q 012895 52 SDPQQVHISLAAKDYIRVSWITDDKEAESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYYYRCG 131 (454)
Q Consensus 52 ~~p~~v~l~~~~~~~~~v~W~t~~~~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Yrv~ 131 (454)
..|..+++.....+++.|+|.-......-.|+|.......+.... ... ...- .+.|+||+|+|.|.++|.
T Consensus 10 ~~P~~l~~~~~~~~sv~lsW~~p~~~~~Y~v~y~~~~~~~~~~~~----~~~----~~~~--~~~l~~L~p~t~Y~~~V~ 79 (104)
T 2dkm_A 10 PPPRALTLAAVTPRTVHLTWQPSAGATHYLVRCSPASPKGEEEER----EVQ----VGRP--EVLLDGLEPGRDYEVSVQ 79 (104)
T ss_dssp CCCCCCEEEEECSSEEEEECCCCSSCSEEEEEEEESSSCCSSCCE----EEE----ESSS--EEEEESCCTTCCEEEEEE
T ss_pred CCCceeEEEecCCCEEEEEEeCCCCCCeEEEEEEECCCCCCcceE----EEe----cCCC--EEEECCCCCCCEEEEEEE
Confidence 467778888777899999997664333456667654332111000 000 1112 688999999999999986
Q ss_pred c-------cCceeEEECCCC
Q 012895 132 G-------RGPEFSFKMPPA 144 (454)
Q Consensus 132 ~-------~s~~~~F~T~p~ 144 (454)
. ......++|.|.
T Consensus 80 A~~~~~~s~p~~~~~~T~p~ 99 (104)
T 2dkm_A 80 SLRGPEGSEARGIRARTPTS 99 (104)
T ss_dssp EECSSSBCCCEEEECCCCCC
T ss_pred EECCCCCCCCEEEEEEcCCC
Confidence 3 123445677653
No 67
>1x5a_A Ephrin type-A receptor 1; tyrosine-protein kinase receptor, ESK, fibronectin type III (FN3) domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: b.1.2.1
Probab=96.62 E-value=0.0047 Score=48.84 Aligned_cols=78 Identities=15% Similarity=0.248 Sum_probs=48.2
Q ss_pred CCeeEEEEecCCCcEEEEE--EeCCCC---CccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEE
Q 012895 53 DPQQVHISLAAKDYIRVSW--ITDDKE---AESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYY 127 (454)
Q Consensus 53 ~p~~v~l~~~~~~~~~v~W--~t~~~~---~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~ 127 (454)
.|..+++.....+++.|.| ..+... ..-.|+|....+ . ..+... .. . ++|.||+|+|.|.
T Consensus 12 ~p~~l~~~~~~~~sv~l~W~~~~P~~~ng~~~Y~v~y~~~~~--------~-~~~~~~--~~--~--~~i~~L~p~t~Y~ 76 (107)
T 1x5a_A 12 SGLSLKLVKKEPRQLELTWAGSRPRNPGGNLSYELHVLNQDE--------E-WHQMVL--EP--R--VLLTKLQPDTTYI 76 (107)
T ss_dssp CSCCCCEEEEETTEEEEECCCCCSSCCSSCCEEEEEEECSSC--------E-EEEEES--SS--E--EEEESCCSSCEEE
T ss_pred CCCceEEEecCCCEEEEEECCCCCCCCCCceEEEEEEEeCCC--------C-ceEEEe--cc--e--EEECCCCCCCEEE
Confidence 4455566666689999999 655332 223455654311 0 011111 11 1 7899999999999
Q ss_pred EEeCc--------cCceeEEECCCCC
Q 012895 128 YRCGG--------RGPEFSFKMPPAN 145 (454)
Q Consensus 128 Yrv~~--------~s~~~~F~T~p~~ 145 (454)
+||.. .+....|+|.++.
T Consensus 77 f~V~A~~~~G~g~~S~~~~~~T~~~~ 102 (107)
T 1x5a_A 77 VRVRTLTPLGPGPFSPDHEFRTSPPS 102 (107)
T ss_dssp EEEEEECSSSCCCCCCCEEEECCCCS
T ss_pred EEEEEECCCccCCCCCCEEEEECCCC
Confidence 99963 3567789997753
No 68
>2rb8_A Tenascin; beta sheet,loop design, alternative splicing, cell adhesion, coiled coil, EGF-like domain, extracellular matrix, glycoprotein; 1.45A {Homo sapiens} PDB: 2rbl_A 1ten_A
Probab=96.58 E-value=0.016 Score=45.41 Aligned_cols=82 Identities=17% Similarity=0.228 Sum_probs=51.0
Q ss_pred CCCeeEEEEecCCCcEEEEEEeCCCC-CccEEEEeecCCC-CceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEEEE
Q 012895 52 SDPQQVHISLAAKDYIRVSWITDDKE-AESVVEYGKLPGR-YNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYYYR 129 (454)
Q Consensus 52 ~~p~~v~l~~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Yr 129 (454)
..|..+.+.....+++.|+|.-.... ..-.|+|...... ...... ..+-...+.|+||+|||.|.++
T Consensus 4 ~~P~~l~v~~~t~~sv~lsW~~p~~~i~~Y~v~y~~~~~~~~~~~~~-----------v~~~~~~~~l~~L~p~t~Y~~~ 72 (104)
T 2rb8_A 4 DAPSQIEVKDVTDTTALITWMPPSQPVDGFELTYGIKDVPGDRTTID-----------LTEDENQYSIGNLKPDTEYEVS 72 (104)
T ss_dssp CCCEEEEEESCCSSCEEEEEECCSSCCSEEEEEEEETTCTTCCEEEE-----------EETTCCEEEECSCCTTCEEEEE
T ss_pred CCCCccEEEEecCCeEEEEEcCCCCccceEEEEEEECcCCCceEEEE-----------cCCCcCEEEeCCCCCCCEEEEE
Confidence 35778888877789999999776422 2346777654311 111110 1112335679999999999999
Q ss_pred eCc-------cCceeEEECCCC
Q 012895 130 CGG-------RGPEFSFKMPPA 144 (454)
Q Consensus 130 v~~-------~s~~~~F~T~p~ 144 (454)
|.. ......|+|.+.
T Consensus 73 V~A~~~~g~s~p~~~~~~T~~~ 94 (104)
T 2rb8_A 73 LISRRGDMSSNPAKETFTTGLA 94 (104)
T ss_dssp EEEEETTEECCCEEEEEECCC-
T ss_pred EEEEeCCccCCCEEEEEECCCC
Confidence 863 123456888664
No 69
>2e7h_A Ephrin type-B receptor 4; FN3 domain, tyrosine- protein kinase receptor HTK, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.57 E-value=0.0066 Score=47.93 Aligned_cols=80 Identities=10% Similarity=0.185 Sum_probs=51.7
Q ss_pred CCeeEEEEecCCCcEEEEEEeCCCC----CccEEEEeecCC--CCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEE
Q 012895 53 DPQQVHISLAAKDYIRVSWITDDKE----AESVVEYGKLPG--RYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTY 126 (454)
Q Consensus 53 ~p~~v~l~~~~~~~~~v~W~t~~~~----~~~~v~y~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y 126 (454)
.|..+++.....+++.|.|.-.... ..-.|+|..... ....... . ... ..+.|++|+|++.|
T Consensus 10 ~p~~l~~~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~~-~---------~~~--~~~~i~~L~p~t~Y 77 (109)
T 2e7h_A 10 AVSDIRVTRSSPSSLSLAWAVPRAPSGAVLDYEVKYHEKGAEGPSSVRFL-K---------TSE--NRAELRGLKRGASY 77 (109)
T ss_dssp CCCCCEEEEEETTEEEEECCCCCCSSSCCCEEEEEEEETTCCSTTTSEEE-E---------ESS--SEEEEESCCTTSCE
T ss_pred CCCccEEEecCCCEEEEEeCCCCCCCCcEeEEEEEEEECCCCCCceeEEE-c---------cCC--CEEEECCCCCCCeE
Confidence 3566777766789999999877432 234667766541 1111111 0 111 25788999999999
Q ss_pred EEEeCc--------cCceeEEECCCC
Q 012895 127 YYRCGG--------RGPEFSFKMPPA 144 (454)
Q Consensus 127 ~Yrv~~--------~s~~~~F~T~p~ 144 (454)
.+||.. .+....|+|.+.
T Consensus 78 ~~~V~A~n~~G~g~~S~~~~~~T~~~ 103 (109)
T 2e7h_A 78 LVQVRARSEAGYGPFGQEHHSQTQLD 103 (109)
T ss_dssp EEEEEEECSSCBCCCCSCEECCCCCC
T ss_pred EEEEEEEeCCccCCCCCCEEEEcCCC
Confidence 999953 356778888775
No 70
>2ed7_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.55 E-value=0.01 Score=47.39 Aligned_cols=83 Identities=17% Similarity=0.316 Sum_probs=53.2
Q ss_pred CCCeeEEEEecCCCcEEEEEEeCCCCCc----cEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEE
Q 012895 52 SDPQQVHISLAAKDYIRVSWITDDKEAE----SVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYY 127 (454)
Q Consensus 52 ~~p~~v~l~~~~~~~~~v~W~t~~~~~~----~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~ 127 (454)
..|..+++.....+++.|.|.-...... -.|+|............ ....-...+.|++|+|++.|.
T Consensus 19 ~~P~~l~~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~----------~~~~~~~~~~i~~L~p~t~Y~ 88 (119)
T 2ed7_A 19 SAPRDVVPVLVSSRFVRLSWRPPAEAKGNIQTFTVFFSREGDNRERALN----------TTQPGSLQLTVGNLKPEAMYT 88 (119)
T ss_dssp CCCSCCEEEEECSSCEEEECCCCSCCSSCEEEEEEEEEESSCCCCEEEE----------CCCTTCCEEEECSCCSSSEEE
T ss_pred cCCcceEEEecCCCEEEEEEeCCCCCCCcEEEEEEEEEeCCCCcceeeE----------eecCCceEEEeCCCCCCCEEE
Confidence 4677788887778999999987643222 34556554332221110 011224457899999999999
Q ss_pred EEeCc--------cCceeEEECCCC
Q 012895 128 YRCGG--------RGPEFSFKMPPA 144 (454)
Q Consensus 128 Yrv~~--------~s~~~~F~T~p~ 144 (454)
+||.. .+....++|.+.
T Consensus 89 ~~V~A~n~~G~g~~S~~~~~~T~~~ 113 (119)
T 2ed7_A 89 FRVVAYNEWGPGESSQPIKVATQPE 113 (119)
T ss_dssp ECCEEEESSCBCSCCCCEEEECCCC
T ss_pred EEEEEEcCCccCCCcCCEEEEeCCC
Confidence 99853 356677888654
No 71
>3e0j_A DNA polymerase subunit delta-2; DNA polymerase delta, P66 subunit, P50 subunit, human, DNA replication, DNA-directed DNA polymerase; HET: DNA; 3.00A {Homo sapiens}
Probab=96.55 E-value=0.021 Score=57.17 Aligned_cols=138 Identities=13% Similarity=0.107 Sum_probs=79.4
Q ss_pred CCCeEEEEEecCCCCCCh---HH----HHHHhh-----------cCCCCeEeecCccccCCCC-----------------
Q 012895 145 NFPIEFAIVGDLGQTEWT---NS----TLDHVG-----------SKDYDVFLLPGDLSYADFQ----------------- 189 (454)
Q Consensus 145 ~~~~~f~~igD~~~~~~~---~~----~l~~i~-----------~~~pd~vl~~GDl~y~~~~----------------- 189 (454)
....++++++|+|.+... .. .++.+. ..++.-+|++||.+.....
T Consensus 198 ~~~~~ialVSGL~igs~~~~~~~~~~ll~d~L~G~~g~~~~~~~as~I~rlIIAGn~v~~~~~~~e~~~~~~y~~~~~~~ 277 (476)
T 3e0j_A 198 DTDRFVLLVSGLGLGGGGGESLLGTQLLVDVVTGQLGDEGEQCSAAHVSRVILAGNLLSHSTQSRDSINKAKYLTKKTQA 277 (476)
T ss_dssp SSCCEEEEECCCCBTSSCHHHHHHHHHHHHHHHTCSSCHHHHHHHTTEEEEEEESCSBCC-------------CHHHHHH
T ss_pred CCCCEEEEECCcccCCCcccchHHHHHHHHHHcCCCCCccccchhhceeEEEEECCccccccccchhhhhhhccccccch
Confidence 456799999999988753 11 223332 3467889999999975422
Q ss_pred --hhhHHHHhhhhhhhhcCCCeeecCCCcccCCCCCCCcchhhhhhhhccCCCC-CCCCCCCceEEEEeCeEEEEEeccc
Q 012895 190 --QPLWDSFGRLVEPYASSRPWMVTEGNHEIESIPIILPHAFKAYNARWLMPYE-ESGSSSNLYYSFDIAGAHIIMLGSY 266 (454)
Q Consensus 190 --~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~p~~-~~~~~~~~~ys~~~g~v~fi~Lds~ 266 (454)
...++.+.+++..+...+|+..+|||||-.+. .+++..+.. ..|..... .+-..-..-|.+++++++|++....
T Consensus 278 ~~~~~~~~ld~~L~~l~~~i~V~lmPG~~DP~~~-~lPQqplh~--~lfp~s~~~~~~~~vtNP~~~~i~G~~~LgtsGq 354 (476)
T 3e0j_A 278 ASVEAVKMLDEILLQLSASVPVDVMPGEFDPTNY-TLPQQPLHP--CMFPLATAYSTLQLVTNPYQATIDGVRFLGTSGQ 354 (476)
T ss_dssp HHHHHHHHHHHHHHHHHTTSCEEEECCTTSSSCS-SSSCCCCCT--TSCHHHHTSTTEEECCSSEEEEETTEEEEECSSH
T ss_pred hhHHHHHHHHHHHHhcccCceEEecCCCCCcccc-cCCCCCcCH--HHhhhhhhcCccEEeCCCeEEEECCEEEEEECCC
Confidence 02345566777788888999999999998532 211111110 00100000 0000012245689999999988642
Q ss_pred C-----CCCCCHHHHHHHHHHHHh
Q 012895 267 T-----DFDEDSAQYKWLKADLAK 285 (454)
Q Consensus 267 ~-----~~~~~~~Q~~WL~~~L~~ 285 (454)
. .+...+.-++.|++.|+.
T Consensus 355 nidDi~ky~~~~~~l~~me~~Lkw 378 (476)
T 3e0j_A 355 NVSDIFRYSSMEDHLEILEWTLRV 378 (476)
T ss_dssp HHHHHHHHSCCCCHHHHHHHHHHB
T ss_pred CHHHHHhcCCCCCHHHHHHHHHHH
Confidence 1 012234566788888865
No 72
>3e7a_A PP-1A, serine/threonine-protein phosphatase PP1-alpha Ca subunit; carbohydrate metabolism, cell cycle, cell division; HET: 1ZN; 1.63A {Homo sapiens} SCOP: d.159.1.3 PDB: 3e7b_A* 3egg_A* 3egh_A* 3hvq_A 3v4y_A* 3n5u_A 1jk7_A* 1it6_A* 2bcd_A* 2bdx_A* 2o8g_A 2o8a_A 1u32_A* 1s70_A*
Probab=96.54 E-value=0.0029 Score=59.90 Aligned_cols=68 Identities=21% Similarity=0.246 Sum_probs=44.1
Q ss_pred EEEEEecCCCCCCh-HHHHHHhhcCCCCeEeecCccccCCCChhhHHHHhhhhhhhh--cCCCeeecCCCcccC
Q 012895 149 EFAIVGDLGQTEWT-NSTLDHVGSKDYDVFLLPGDLSYADFQQPLWDSFGRLVEPYA--SSRPWMVTEGNHEIE 219 (454)
Q Consensus 149 ~f~~igD~~~~~~~-~~~l~~i~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~l~--~~~P~~~v~GNHD~~ 219 (454)
+++++||+|..... .++++.+.....+-++++||+++.+....+ . ...+..+. ....++.+.||||..
T Consensus 57 ~i~viGDIHG~~~~L~~ll~~~g~~~~~~~vfLGD~VDrG~~s~e--v-l~lL~~lk~~~p~~v~~lrGNHE~~ 127 (299)
T 3e7a_A 57 PLKICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLE--T-ICLLLAYKIKYPENFFLLRGNHECA 127 (299)
T ss_dssp SEEEECBCTTCHHHHHHHHHHHCSTTSSCEEECSCCSSSSSCHHH--H-HHHHHHHHHHSTTTEEECCCTTSSH
T ss_pred CEEEEecCCCCHHHHHHHHHHhCCCCCccEEeCCcccCCCCCcHH--H-HHHHHHHHhhCCCcEEEEecCchhh
Confidence 58999999976432 344555555566889999999987665321 1 22222222 123589999999973
No 73
>1va9_A DOWN syndrome cell adhesion molecule like- protein 1B; FNIII domain, dscaml1 protein, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=96.53 E-value=0.015 Score=46.58 Aligned_cols=87 Identities=14% Similarity=0.169 Sum_probs=54.6
Q ss_pred CCCeeEEEEecCCCcEEEEEEeCCC--C----CccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCE
Q 012895 52 SDPQQVHISLAAKDYIRVSWITDDK--E----AESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATT 125 (454)
Q Consensus 52 ~~p~~v~l~~~~~~~~~v~W~t~~~--~----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~ 125 (454)
..|..+++.....+++.|.|..... . ..-.|+|............ .... ...+-...+.|++|+|+|.
T Consensus 17 ~~P~~~~~~~~~~~sv~l~W~~p~~~~~~g~i~~Y~v~~~~~~~~~~~~~~--~~~~----~~~~~~~~~~i~~L~p~t~ 90 (122)
T 1va9_A 17 GPPMDVTLQPVTSQSIQVTWKAPKKELQNGVIRGYQIGYRENSPGSNGQYS--IVEM----KATGDSEVYTLDNLKKFAQ 90 (122)
T ss_dssp SCCEEEEEEECSSSEEEEEEECCCSSTTCSCCCEEEEEEEESSTTSCCSCB--CCBC----CCCSSEEEEEEESCCSSCC
T ss_pred CCCcceEEEeccCCEEEEEEeCCCCcCCCCcEeEEEEEEEECCCCCCcceE--EEEE----ecCCceeEEEeCCCCCCCE
Confidence 4678888887778999999998853 1 2345667655432111000 0000 0123356778999999999
Q ss_pred EEEEeCc--------cCceeEEECCCC
Q 012895 126 YYYRCGG--------RGPEFSFKMPPA 144 (454)
Q Consensus 126 Y~Yrv~~--------~s~~~~F~T~p~ 144 (454)
|.+||.. .+....|+|++.
T Consensus 91 Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 117 (122)
T 1va9_A 91 YGVVVQAFNRAGTGPSSSEINATTLES 117 (122)
T ss_dssp EEEEEEEEETTEECCCCCCEECCCCSS
T ss_pred EEEEEEEEcCCCCCCCccCEEEEeCCC
Confidence 9999963 245667777653
No 74
>3h63_A Serine/threonine-protein phosphatase 5; metalloenzyme, inhibitors, drug design, cytoplasm, hydrolase, iron, manganese, metal-binding, nucleus; HET: NHC; 1.30A {Homo sapiens} SCOP: d.159.1.3 PDB: 3h60_A* 3h61_A* 3h62_C* 3h64_A* 3h66_A 3h67_A* 3h68_A* 3h69_A* 1s95_A
Probab=96.53 E-value=0.0033 Score=59.94 Aligned_cols=71 Identities=13% Similarity=0.149 Sum_probs=44.1
Q ss_pred CCeEEEEEecCCCCCC-hHHHHHHhhcC-CCCeEeecCccccCCCChhhHHHHhhhhhhhhc--CCCeeecCCCcccC
Q 012895 146 FPIEFAIVGDLGQTEW-TNSTLDHVGSK-DYDVFLLPGDLSYADFQQPLWDSFGRLVEPYAS--SRPWMVTEGNHEIE 219 (454)
Q Consensus 146 ~~~~f~~igD~~~~~~-~~~~l~~i~~~-~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~--~~P~~~v~GNHD~~ 219 (454)
...|++++||+|.... ..++++..... ..+.++++||+++.+....+ . ...+..+.. ...++.+.||||..
T Consensus 58 ~~~ri~viGDIHG~~~~L~~ll~~~g~~~~~~~~vflGD~VDRG~~s~e--v-l~lL~~lk~~~p~~v~~lrGNHE~~ 132 (315)
T 3h63_A 58 ETEKITVCGDTHGQFYDLLNIFELNGLPSETNPYIFNGDFVDRGSFSVE--V-ILTLFGFKLLYPDHFHLLRGNHETD 132 (315)
T ss_dssp TTCEEEEECCCTTCHHHHHHHHHHHCCCBTTBCEEEESCCSSSSTTHHH--H-HHHHHHHHHHSTTTEEEECCTTSSH
T ss_pred CCceEEEEecCCCCHHHHHHHHHHhCCCCCCCEEEEeCCccCCCcChHH--H-HHHHHHhhhhcCCcEEEEecCcccc
Confidence 4578999999997632 23344444333 33569999999987654321 1 222232221 23588999999964
No 75
>3ll8_A Serine/threonine-protein phosphatase 2B catalytic alpha isoform; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 2p6b_A 1m63_A* 1tco_A* 1mf8_A* 2jog_A
Probab=96.53 E-value=0.0023 Score=61.94 Aligned_cols=69 Identities=16% Similarity=0.187 Sum_probs=44.6
Q ss_pred eEEEEEecCCCCCC-hHHHHHHhhcCCCCeEeecCccccCCCChhhHHHHhhhhhhhhcC--CCeeecCCCcccC
Q 012895 148 IEFAIVGDLGQTEW-TNSTLDHVGSKDYDVFLLPGDLSYADFQQPLWDSFGRLVEPYASS--RPWMVTEGNHEIE 219 (454)
Q Consensus 148 ~~f~~igD~~~~~~-~~~~l~~i~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~~--~P~~~v~GNHD~~ 219 (454)
.+++++||+|.... ..++++.......+-++++||+++.+....+ . ...+..+... -.++.+.||||..
T Consensus 70 ~pi~ViGDIHG~~~dL~~ll~~~g~~~~~~~vfLGD~VDRG~~s~E--v-l~lL~~lk~~~p~~v~llrGNHE~~ 141 (357)
T 3ll8_A 70 APVTVCGDIHGQFFDLMKLFEVGGSPANTRYLFLGDYVDRGYFSIE--C-VLYLWALKILYPKTLFLLRGNHECR 141 (357)
T ss_dssp SSEEEECCCTTCHHHHHHHHHHHCCTTTCCEEECSCCSSSSTTHHH--H-HHHHHHHHHHCTTTEEECCCTTSSH
T ss_pred ccceeeccCCCCHHHHHHHHHhcCCCCCcEEEECCCccCCCcChHH--H-HHHHHHhhhhcCCcEEEEeCchhhh
Confidence 35899999997642 2344554445667889999999987654321 1 2222223222 3488999999974
No 76
>2dmk_A Midline 2 isoform 2; midline defect 2, tripartite motif protein 1, midin-2, ring finger protein 60, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.50 E-value=0.014 Score=47.58 Aligned_cols=82 Identities=21% Similarity=0.354 Sum_probs=51.5
Q ss_pred CCCCe-eEEEEecCCCcEEEEEEeCCCCC-cc-EEEEeecCC-----------CCceEEEeEeEEEeeeeeecCeEEEEE
Q 012895 51 ESDPQ-QVHISLAAKDYIRVSWITDDKEA-ES-VVEYGKLPG-----------RYNTVATGEHTSYQFFFYKSGKIHHVK 116 (454)
Q Consensus 51 ~~~p~-~v~l~~~~~~~~~v~W~t~~~~~-~~-~v~y~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 116 (454)
...|. .+++.....++++|.|..+.... .. .++|..... ..+..... .. ....+
T Consensus 16 P~~P~~~~~~~~~~~~sv~L~W~~p~~~g~~~Y~~~Y~~~~~~~~~~~~~~~~~~w~~~~~----------~~--~~~~~ 83 (127)
T 2dmk_A 16 PNPPSIREELCTASHDTITVHWISDDEFSISSYELQYTIFTGQANFISLYNSVDSWMIVPN----------IK--QNHYT 83 (127)
T ss_dssp CCCCEEEEEEEEEETTEEEEEEECSCCSSEEEEEEEEEEESCCSCHHHHHHTGGGSEEEEE----------EC--SSEEE
T ss_pred CcCCCCCCEEEeeeCCEEEEEECCCCCCCccceEEEEEEecccccccccccCCCCcEEeec----------cc--CCeEE
Confidence 34676 77777777999999999886433 23 677764110 11111110 01 12356
Q ss_pred ECCCCCCCEEEEEeCc-------cCceeEEECCCC
Q 012895 117 IGPLEPATTYYYRCGG-------RGPEFSFKMPPA 144 (454)
Q Consensus 117 l~gL~p~t~Y~Yrv~~-------~s~~~~F~T~p~ 144 (454)
|+||+|++.|.|||.. .+....++|++.
T Consensus 84 v~gL~p~t~Y~frV~A~N~~G~~~S~~v~~~T~~~ 118 (127)
T 2dmk_A 84 VHGLQSGTRYIFIVKAINQAGSRNSEPTRLKTNSQ 118 (127)
T ss_dssp EESCCSSCEEEEEEEEEESSCEEECCCEEEECCSS
T ss_pred ECCCCCCCEEEEEEEEEeCCCCCCCcCeEeEeCCC
Confidence 8899999999999964 245667888763
No 77
>2dju_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.50 E-value=0.013 Score=45.54 Aligned_cols=81 Identities=11% Similarity=0.166 Sum_probs=51.4
Q ss_pred CCCeeEEEEecCCCcEEEEEEeCCC--CCccEEEEeecCCCC-ceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEEE
Q 012895 52 SDPQQVHISLAAKDYIRVSWITDDK--EAESVVEYGKLPGRY-NTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYYY 128 (454)
Q Consensus 52 ~~p~~v~l~~~~~~~~~v~W~t~~~--~~~~~v~y~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y 128 (454)
..|..+.+.....+++.|.|..... ...-.|+|....... +.... ......+.|++|+|++.|.|
T Consensus 9 ~~P~~~~~~~~~~~sv~l~W~~~~~~~i~~Y~v~~~~~~~~~~~~~~~------------~~~~~~~~i~~L~p~t~Y~~ 76 (106)
T 2dju_A 9 KPPIDLVVTETTATSVTLTWDSGNSEPVTYYGIQYRAAGTEGPFQEVD------------GVATTRYSIGGLSPFSEYAF 76 (106)
T ss_dssp CCCEEEEEEEEETTEEEEEEECCCSSCCSEEEEEEEETTCCSCCCCBC------------CCCSSEEEEESCCTTCEEEE
T ss_pred cCCCCcEEEeccCCEEEEEEcCCCCCCceEEEEEEEECCCCCCeEEcc------------CCCccEEEEeCCCCCcEEEE
Confidence 4677777777678899999997631 133466776554321 11111 01122457889999999999
Q ss_pred EeCc--------cCceeEEECCCC
Q 012895 129 RCGG--------RGPEFSFKMPPA 144 (454)
Q Consensus 129 rv~~--------~s~~~~F~T~p~ 144 (454)
||.. .+....++|.+.
T Consensus 77 ~V~A~n~~G~~~~S~~~~~~T~~~ 100 (106)
T 2dju_A 77 RVLAVNSIGRGPPSEAVRARTGEQ 100 (106)
T ss_dssp EEEEECSSCBCCCCCCEEEECCCS
T ss_pred EEEEEeCCccCCCcccEEeEcCCC
Confidence 9963 245667888653
No 78
>1x5x_A Fibronectin type-III domain containing protein 3A; structural genomics, KIAA0970, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=96.44 E-value=0.013 Score=46.13 Aligned_cols=80 Identities=13% Similarity=0.212 Sum_probs=48.3
Q ss_pred CeeEEEEecCCCcEEEEEEeCCCC-----CccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEEE
Q 012895 54 PQQVHISLAAKDYIRVSWITDDKE-----AESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYYY 128 (454)
Q Consensus 54 p~~v~l~~~~~~~~~v~W~t~~~~-----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y 128 (454)
|..+.+.....+++.|.|...... ..-.|+|.............. .. ...++|++|+|++.|.|
T Consensus 11 P~~p~~~~~~~~sv~l~W~~p~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~---------~~--~~~~~v~~L~p~t~Y~f 79 (109)
T 1x5x_A 11 PASPVLTKAGITWLSLQWSKPSGTPSDEGISYILEMEEETSGYGFKPKYD---------GE--DLAYTVKNLRRSTKYKF 79 (109)
T ss_dssp CCCCEEEEECSSEEEEECCCCSSCCSSSSCEEEEEECCSSSSCCCEEEEE---------ES--CSEEEEESCCSSCEEEE
T ss_pred CCCCEEEEccCCEEEEEEcCCCCCCCCcccEEEEEEecCCCCcceEEeEe---------CC--ccEEEECCCCCCCEEEE
Confidence 333346666688999999876432 224666765543212111100 11 23467899999999999
Q ss_pred EeCc--------cCceeEEECCCC
Q 012895 129 RCGG--------RGPEFSFKMPPA 144 (454)
Q Consensus 129 rv~~--------~s~~~~F~T~p~ 144 (454)
||.. .+....++|.+.
T Consensus 80 rV~A~n~~G~s~~S~~~~~~T~~~ 103 (109)
T 1x5x_A 80 KVIAYNSEGKSNPSEVVEFTTCPD 103 (109)
T ss_dssp EEEEECSSCEEEECCCEEEECCCC
T ss_pred EEEEEeCCCCcCCccCEEeEeCCC
Confidence 9964 245667788653
No 79
>2ed9_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.42 E-value=0.015 Score=46.68 Aligned_cols=81 Identities=16% Similarity=0.248 Sum_probs=53.2
Q ss_pred CCCCeeEEEEecCCCcEEEEEEeCCC--C----CccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCC
Q 012895 51 ESDPQQVHISLAAKDYIRVSWITDDK--E----AESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPAT 124 (454)
Q Consensus 51 ~~~p~~v~l~~~~~~~~~v~W~t~~~--~----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t 124 (454)
...|..+.+.....+++.|.|..... . ..-.|+|........... ...-...+.|.+|+|+|
T Consensus 29 ~~~P~~l~~~~~~~~sv~l~W~~p~~~~~~g~i~~Y~v~~~~~~~~~~~~~------------~~~~~~~~~i~~L~p~t 96 (124)
T 2ed9_A 29 SAPPQNVSLEVVNSRSIKVSWLPPPSGTQNGFITGYKIRHRKTTRRGEMET------------LEPNNLWYLFTGLEKGS 96 (124)
T ss_dssp SSCCBSCCEEEEETTEEEEECBCCCTTTCCSCCCEEEEEEEESSSSCCEEE------------ECSSCSEEEEECCCSSC
T ss_pred CCCCeeeEEEEcCCCEEEEEEECcCCcCCCcEEeEEEEEEEECCCCcceEE------------ecCCcCEEEEcCCCCCC
Confidence 34677777877778999999988753 1 224566766543322111 11223456789999999
Q ss_pred EEEEEeCc--------cCceeEEECCC
Q 012895 125 TYYYRCGG--------RGPEFSFKMPP 143 (454)
Q Consensus 125 ~Y~Yrv~~--------~s~~~~F~T~p 143 (454)
.|.+||.. .+....|+|+.
T Consensus 97 ~Y~~~V~A~n~~G~g~~S~~~~~~T~e 123 (124)
T 2ed9_A 97 QYSFQVSAMTVNGTGPPSNWYTAETPE 123 (124)
T ss_dssp EEEECEEEECSSCBCCCCCCEEEECCC
T ss_pred EEEEEEEEEcCCccCCCCCCEEEECCC
Confidence 99999853 35667788865
No 80
>1x5z_A Receptor-type tyrosine-protein phosphatase delta; fibronectin type III domain containing protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=96.41 E-value=0.009 Score=47.34 Aligned_cols=81 Identities=17% Similarity=0.250 Sum_probs=52.0
Q ss_pred CCCeeEEEEecCCCcEEEEEEeCCCC--CccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEEEE
Q 012895 52 SDPQQVHISLAAKDYIRVSWITDDKE--AESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYYYR 129 (454)
Q Consensus 52 ~~p~~v~l~~~~~~~~~v~W~t~~~~--~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Yr 129 (454)
..|..+++.....+++.|.|...... ..-.|+|............. .. ...+.|++|+|+|.|.+|
T Consensus 19 ~~P~~l~~~~~~~~sv~l~W~~p~~~~i~~Y~v~~~~~~~~~~~~~~~----------~~--~~~~~i~~L~p~t~Y~~~ 86 (115)
T 1x5z_A 19 GQPLNFKAEPESETSILLSWTPPRSDTIANYELVYKDGEHGEEQRITI----------EP--GTSYRLQGLKPNSLYYFR 86 (115)
T ss_dssp CCCEEEEEECSSSSEEEEEEECCSCCCCCEEEECBEESSSCCCBCCEE----------CS--SSEEEEECCCTTCEEEEC
T ss_pred CCCccCEeeeCCCCEEEEEEcCCCCCCccEEEEEEEeCCCCCceEEec----------CC--CcEEEECCCCCCCeEEEE
Confidence 36788888777789999999887532 23355565443222111000 11 245678999999999999
Q ss_pred eCc--------cCceeEEECCCC
Q 012895 130 CGG--------RGPEFSFKMPPA 144 (454)
Q Consensus 130 v~~--------~s~~~~F~T~p~ 144 (454)
|.. .+....|+|.+.
T Consensus 87 V~A~n~~G~g~~S~~~~~~T~~~ 109 (115)
T 1x5z_A 87 LAARSPQGLGASTAEISARTMQS 109 (115)
T ss_dssp EEEECSSCEEEECCCEEEECCCC
T ss_pred EEEECCCcccCCCcCEEEecCCC
Confidence 963 256677888654
No 81
>3n1f_C Cell adhesion molecule-related/DOWN-regulated BY; binding sites, calcium, cell adhesion molecules, cell cycle cell LINE, conserved sequence; 1.60A {Homo sapiens} SCOP: b.1.2.1 PDB: 3d1m_C 3n1q_C 3n1m_C 3n1g_C 3n1p_C
Probab=96.38 E-value=0.024 Score=44.24 Aligned_cols=72 Identities=14% Similarity=0.149 Sum_probs=46.0
Q ss_pred CCCCeeEEEEecCCCcEEEEEEeCCC------CCccEEEEeecCCCC--ceEEEeEeEEEeeeeeecCeEEEEEECCCCC
Q 012895 51 ESDPQQVHISLAAKDYIRVSWITDDK------EAESVVEYGKLPGRY--NTVATGEHTSYQFFFYKSGKIHHVKIGPLEP 122 (454)
Q Consensus 51 ~~~p~~v~l~~~~~~~~~v~W~t~~~------~~~~~v~y~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p 122 (454)
..+|..+.+.....+++.|+|.-... ...-.|.|....... ..... .. .. -...+.|++|+|
T Consensus 5 ~~~P~~~~~~~~s~tsi~v~W~~p~~~~~ng~i~gY~v~y~~~~~~~~~~~~~~----~v-----~~-~~~~~~l~~L~p 74 (102)
T 3n1f_C 5 ITGPHIAYTEAVSDTQIMLKWTYIPSSNNNTPIQGFYIYYRPTDSDNDSDYKRD----VV-----EG-SKQWHMIGHLQP 74 (102)
T ss_dssp CSCCEEEEEEECSSSCEEEEEECCC-----CCCCEEEEEEEETTCCCGGGCEEE----EE-----ET-TCSEEEECSCCT
T ss_pred CCCCceeEEEEcCCCEEEEEeECCChhhcCCccceEEEEEEECCCCCCCceEEE----EE-----cC-CceEEECCCCCC
Confidence 35788888888889999999987742 122367787654321 11100 00 11 122468999999
Q ss_pred CCEEEEEeCc
Q 012895 123 ATTYYYRCGG 132 (454)
Q Consensus 123 ~t~Y~Yrv~~ 132 (454)
+|.|.++|..
T Consensus 75 ~t~Y~v~V~A 84 (102)
T 3n1f_C 75 ETSYDIKMQC 84 (102)
T ss_dssp TCEEEEEEEE
T ss_pred CCEEEEEEEE
Confidence 9999999863
No 82
>1wfo_A Sidekick 2; FN3, cell adhesion, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=96.38 E-value=0.0093 Score=48.52 Aligned_cols=83 Identities=10% Similarity=0.141 Sum_probs=53.0
Q ss_pred CCCeeEEEEecCCCcEEEEEEeCCCCC----ccEEEEeecCCCCc-eEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEE
Q 012895 52 SDPQQVHISLAAKDYIRVSWITDDKEA----ESVVEYGKLPGRYN-TVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTY 126 (454)
Q Consensus 52 ~~p~~v~l~~~~~~~~~v~W~t~~~~~----~~~v~y~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y 126 (454)
..|..+++.....+++.|.|....... .-.|+|........ .... ....-...+.|++|+|+|.|
T Consensus 29 ~~P~~l~~~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~----------~~~~~~~~~~i~~L~p~t~Y 98 (130)
T 1wfo_A 29 GPPMGILFPEVRTTSVRLIWQPPAAPNGIILAYQITHRLNTTTANTATVE----------VLAPSARQYTATGLKPESVY 98 (130)
T ss_dssp CCCCCCEEEEECSSEEEEECCCCSCCCSCCCEEEEEEEESSCCCSCCCEE----------EECTTCCEEEEESCCSSSEE
T ss_pred CCCCceEEEecCCCEEEEEEcCCCCCCCceEEEEEEEEECCCCCceEEEE----------EeCCCceEEEEcCCCCCCEE
Confidence 467778888777899999998774322 34566765532211 1000 01223455778999999999
Q ss_pred EEEeCc--------cCceeEEECCCC
Q 012895 127 YYRCGG--------RGPEFSFKMPPA 144 (454)
Q Consensus 127 ~Yrv~~--------~s~~~~F~T~p~ 144 (454)
.+||.. .+....|+|.+.
T Consensus 99 ~~~V~A~n~~G~g~~S~~~~~~T~~~ 124 (130)
T 1wfo_A 99 LFRITAQTRKGWGEAAEALVVTTEKR 124 (130)
T ss_dssp EEEEEEECSSCEEEEEEEEEECCSSC
T ss_pred EEEEEEEeCCcCCCCcccEEEecCCC
Confidence 999964 244567888654
No 83
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=96.38 E-value=0.0044 Score=63.02 Aligned_cols=70 Identities=13% Similarity=0.177 Sum_probs=44.1
Q ss_pred CCeEEEEEecCCCCCC-hHHHHHHhhcCC-CCeEeecCccccCCCChhhHHHHhhhhhhh--hcCCCeeecCCCccc
Q 012895 146 FPIEFAIVGDLGQTEW-TNSTLDHVGSKD-YDVFLLPGDLSYADFQQPLWDSFGRLVEPY--ASSRPWMVTEGNHEI 218 (454)
Q Consensus 146 ~~~~f~~igD~~~~~~-~~~~l~~i~~~~-pd~vl~~GDl~y~~~~~~~~~~~~~~~~~l--~~~~P~~~v~GNHD~ 218 (454)
...+++++||+|.... ...+++.+.... .|.+|++||+++.+.... +.+ ..+..+ .....++.+.||||.
T Consensus 211 ~~~~~~vigDiHG~~~~l~~~l~~~~~~~~~~~~v~lGD~vdrG~~s~--e~~-~~l~~l~~~~~~~~~~lrGNHE~ 284 (477)
T 1wao_1 211 ETEKITVCGDTHGQFYDLLNIFELNGLPSETNPYIFNGDFVDRGSFSV--EVI-LTLFGFKLLYPDHFHLLRGNHET 284 (477)
T ss_dssp SSCEEEEECBCTTCHHHHHHHHHHHCCCBTTBCEEEESCCSSSSTTHH--HHH-HHHHHHHHHSTTTEEEECCTTSS
T ss_pred CCcceEEEeCCCCCHHHHHHHHHHcCCCCCcCeEEEeccccCCCcchH--HHH-HHHHHHHhhCCCceEeecCCccH
Confidence 4589999999997632 233445544333 356999999998765432 122 222222 123579999999996
No 84
>1k85_A Chitinase A1; fibronectin type III domain, chitin binding domain, carbohydrase, horizontal gene transfer, hydrolase; NMR {Bacillus circulans} SCOP: b.1.2.1
Probab=96.30 E-value=0.041 Score=41.34 Aligned_cols=66 Identities=18% Similarity=0.350 Sum_probs=41.0
Q ss_pred CCCeeEEEEecCCCcEEEEEEeCCCCCccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEEEEeC
Q 012895 52 SDPQQVHISLAAKDYIRVSWITDDKEAESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYYYRCG 131 (454)
Q Consensus 52 ~~p~~v~l~~~~~~~~~v~W~t~~~~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Yrv~ 131 (454)
..|..+++.....+++.++|...... .....|....+. ... .. ... -...+++|+||+.|+|+|.
T Consensus 5 ~~P~~l~~~~~~~~sv~L~W~~~~~~-~~i~~Y~v~~~~-~~~--~~---------~~~--~~~~~~~L~~~t~Y~~~V~ 69 (88)
T 1k85_A 5 TAPTNLASTAQTTSSITLSWTASTDN-VGVTGYDVYNGT-ALA--TT---------VTG--TTATISGLAADTSYTFTVK 69 (88)
T ss_dssp CCCEEEEEEEECSSCEEEEEECCSCC-SSEEEEEEEESS-SEE--EE---------ESS--SEEEECCCCSSCEEEEEEE
T ss_pred CCCCccEEEeccCCEEEEEECCCCCC-CCccEEEEEECC-EEE--ee---------cCC--CEEEeCCCCCCCEEEEEEE
Confidence 46777888777789999999877432 234444432111 111 11 111 1356889999999999996
Q ss_pred c
Q 012895 132 G 132 (454)
Q Consensus 132 ~ 132 (454)
.
T Consensus 70 A 70 (88)
T 1k85_A 70 A 70 (88)
T ss_dssp E
T ss_pred E
Confidence 4
No 85
>2edx_A Protein tyrosine phosphatase, receptor type, F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.27 E-value=0.029 Score=45.62 Aligned_cols=85 Identities=19% Similarity=0.203 Sum_probs=51.8
Q ss_pred CCCCeeEEEEecCCCcEEEEEEeC--CCCC----ccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCC
Q 012895 51 ESDPQQVHISLAAKDYIRVSWITD--DKEA----ESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPAT 124 (454)
Q Consensus 51 ~~~p~~v~l~~~~~~~~~v~W~t~--~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t 124 (454)
...|..+++.....+++.|.|... .... .-.|+|............ .. ........++|++|+|+|
T Consensus 19 ~~~P~~l~~~~~~~~sv~l~W~~p~~~~~~g~i~~Y~v~~~~~~~~~~~~~~-----~~---~~~~~~~~~~i~~L~p~t 90 (134)
T 2edx_A 19 SAPPQKVMCVSMGSTTVRVSWVPPPADSRNGVITQYSVAYEAVDGEDRGRHV-----VD---GISREHSSWDLVGLEKWT 90 (134)
T ss_dssp SSCSEEEEEECSSSSEEEEEEECCCSTTCSSCEEEEEEEEEESSSSCCCCEE-----EC---CCBTTCSEEEEESCCTTC
T ss_pred CCCCcccEEEeCCCCEEEEEecCCCccCCCCceeEEEEEEEECCCCCcccEE-----EE---eeCCCccEEEeCCCCCCC
Confidence 346788888777788999999987 3222 224455544322111000 00 012234567889999999
Q ss_pred EEEEEeCc--------cCceeEEECCC
Q 012895 125 TYYYRCGG--------RGPEFSFKMPP 143 (454)
Q Consensus 125 ~Y~Yrv~~--------~s~~~~F~T~p 143 (454)
.|.+||.. .+....|+|.+
T Consensus 91 ~Y~~~V~A~n~~G~g~~S~~~~~~T~~ 117 (134)
T 2edx_A 91 EYRVWVRAHTDVGPGPESSPVLVRTDE 117 (134)
T ss_dssp EEEEEEEEEETTBCCCCCCCEEEECCC
T ss_pred EEEEEEEEEcCCCcCCCCCCEEeecCC
Confidence 99999853 24566788854
No 86
>1aui_A Calcineurin, serine/threonine phosphatase 2B; hydrolase, immunosuppression; 2.10A {Homo sapiens} SCOP: d.159.1.3
Probab=96.26 E-value=0.0037 Score=63.10 Aligned_cols=69 Identities=16% Similarity=0.188 Sum_probs=43.1
Q ss_pred eEEEEEecCCCCCCh-HHHHHHhhcCCCCeEeecCccccCCCChhhHHHHhhhhhhhhcC--CCeeecCCCcccC
Q 012895 148 IEFAIVGDLGQTEWT-NSTLDHVGSKDYDVFLLPGDLSYADFQQPLWDSFGRLVEPYASS--RPWMVTEGNHEIE 219 (454)
Q Consensus 148 ~~f~~igD~~~~~~~-~~~l~~i~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~~--~P~~~v~GNHD~~ 219 (454)
.+++++||+|..... ..+++.......+-+|++||+++.+....+ ...++..+... -.++.+.||||..
T Consensus 83 ~pI~VIGDIHGq~~dL~~LL~~~g~p~~d~yVFLGDyVDRGp~S~E---vl~lL~aLk~~~P~~v~lLRGNHE~~ 154 (521)
T 1aui_A 83 APVTVCGDIHGQFFDLMKLFEVGGSPANTRYLFLGDYVDRGYFSIE---CVLYLWALKILYPKTLFLLRGNHECR 154 (521)
T ss_dssp SSEEEECCCTTCHHHHHHHHHHHCCTTTCCEEECSCCSSSSSCHHH---HHHHHHHHHHHSTTTEEECCCTTSSH
T ss_pred cceeeccCCCCCHHHHHHHHHhcCCCCcceEEEcCCcCCCCCCHHH---HHHHHHHHhhhCCCeEEEecCCccHH
Confidence 468999999976432 234442224456889999999987665321 12222223222 3489999999974
No 87
>2dbj_A Proto-oncogene tyrosine-protein kinase MER precursor; C-MER, receptor tyrosine kinase mertk, FN3 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.21 E-value=0.049 Score=43.88 Aligned_cols=86 Identities=12% Similarity=0.119 Sum_probs=50.8
Q ss_pred CCCCCeeEEEEe-cCCCcEEEEEEeC--CCCCcc----EEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCC
Q 012895 50 SESDPQQVHISL-AAKDYIRVSWITD--DKEAES----VVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEP 122 (454)
Q Consensus 50 ~~~~p~~v~l~~-~~~~~~~v~W~t~--~~~~~~----~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p 122 (454)
+...|..+++.. ...+++.|.|.-. ...... .|+|........ .. +.. ....-...+.|++|+|
T Consensus 18 P~~~P~~~~~~~~~s~~sv~l~W~pp~~~~~~g~i~~Y~v~~~~~~~~~~----~~---~~~--~~~~~~~~~~l~~L~p 88 (124)
T 2dbj_A 18 PSVAPLNVTVFLNESSDNVDIRWMKPPTKQQDGELVGYRISHVWQSAGIS----KE---LLE--EVGQNGSRARISVQVH 88 (124)
T ss_dssp CCSCCEEEEEEECSSSSEEEEEEECCSCCSTTCCEEEEEEEEEEEETTEE----EE---EEE--EEESTTSCEEEECCCS
T ss_pred CCCCCcceEEEecCCCCEEEEEEcCCCcccCCCeEeEEEEEEEECCCCCc----cc---eEE--EeCCCcceEEecCCCC
Confidence 345778888873 5588999999987 322212 344432211100 00 000 0011223567899999
Q ss_pred CCEEEEEeCc--------cCceeEEECCCC
Q 012895 123 ATTYYYRCGG--------RGPEFSFKMPPA 144 (454)
Q Consensus 123 ~t~Y~Yrv~~--------~s~~~~F~T~p~ 144 (454)
++.|.+||.. .+....|+|++.
T Consensus 89 ~t~Y~~~V~A~n~~G~Gp~S~~~~~~T~~~ 118 (124)
T 2dbj_A 89 NATCTVRIAAVTRGGVGPFSDPVKIFIPAH 118 (124)
T ss_dssp SSEEEECEEEEESSCBCCCCCCEEEECCCS
T ss_pred CCEEEEEEEEECCCccCCCCCCEEEEcCCC
Confidence 9999999963 356788999875
No 88
>3b83_A Ten-D3; beta sheet, computational redesigned protein, alternative splicing, cell adhesion, coiled coil, EGF-like domain, extracellular matrix; 2.40A {Homo sapiens}
Probab=96.17 E-value=0.047 Score=42.23 Aligned_cols=69 Identities=20% Similarity=0.289 Sum_probs=46.0
Q ss_pred CCeeEEEEecCCCcEEEEEEeCCCC-CccEEEEeecCCCC-ceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEEEEe
Q 012895 53 DPQQVHISLAAKDYIRVSWITDDKE-AESVVEYGKLPGRY-NTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYYYRC 130 (454)
Q Consensus 53 ~p~~v~l~~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Yrv 130 (454)
.|..+.+.....+++.|+|.-+..+ ..-.|+|....... ..... ...-...++|+||+|+|.|.+||
T Consensus 4 ~P~~l~~~~~~~~sv~lsW~pP~~~i~~Y~v~y~~~~~~~~~~~~~-----------~~~~~t~~~i~~L~p~t~Y~~~V 72 (100)
T 3b83_A 4 PPFNIKVTNITLTTAVVTWQPPILPIEGILVTFGRKNDPSDETTVD-----------LTSSITSLTLTNLEPNTTYEIRI 72 (100)
T ss_dssp CCEEEEEESCCSSCEEEEEECCSSCCSEEEEEEEESSCTTTCEEEE-----------ECTTEEEEEECSCCTTCEEEEEE
T ss_pred cCCccEEEEecCCEEEEEEcCCcccCCEEEEEEEECCCCCCceEEE-----------ECCcceEEEECCCCCCCEEEEEE
Confidence 5777888777789999999876432 23467776544221 11110 12234567899999999999999
Q ss_pred Cc
Q 012895 131 GG 132 (454)
Q Consensus 131 ~~ 132 (454)
..
T Consensus 73 ~A 74 (100)
T 3b83_A 73 VA 74 (100)
T ss_dssp EE
T ss_pred EE
Confidence 64
No 89
>1x5h_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=96.15 E-value=0.039 Score=44.79 Aligned_cols=83 Identities=18% Similarity=0.270 Sum_probs=51.7
Q ss_pred CCCCeeEEEEecCCCcEEEEEEeCCC--CCccEEE----EeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCC
Q 012895 51 ESDPQQVHISLAAKDYIRVSWITDDK--EAESVVE----YGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPAT 124 (454)
Q Consensus 51 ~~~p~~v~l~~~~~~~~~v~W~t~~~--~~~~~v~----y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t 124 (454)
...|..+.+.....+++.|.|..... ....... |...... ...... ...+....++|++|+|+|
T Consensus 19 ~~~P~~l~~~~~~~~sv~l~W~~p~~~~~~g~i~~Y~v~~~~~~~~------~~~~~~----~~~~~~~~~~i~~L~p~t 88 (132)
T 1x5h_A 19 SAAPQNLSLEVRNSKSIMIHWQPPAPATQNGQITGYKIRYRKASRK------SDVTET----LVSGTQLSQLIEGLDRGT 88 (132)
T ss_dssp CCCCEEEEEECCSSSEEEEEEECCCTTTCCSCEEEEBCEEEETTEE------EEEECC----BCCTTCCEEEEECCCSSC
T ss_pred CCCCeeeEEEeCCCCEEEEEEeCCCCcCCCceEeEEEEEEEECCCC------CccEEE----EeCCCccEEEeCCCCCCC
Confidence 34677888877778999999998853 2222333 3332210 000000 022334567889999999
Q ss_pred EEEEEeCc--------cCceeEEECCC
Q 012895 125 TYYYRCGG--------RGPEFSFKMPP 143 (454)
Q Consensus 125 ~Y~Yrv~~--------~s~~~~F~T~p 143 (454)
.|.+||.. .+....|+|++
T Consensus 89 ~Y~~~V~A~n~~G~g~~S~~~~~~T~~ 115 (132)
T 1x5h_A 89 EYNFRVAALTINGTGPATDWLSAETFE 115 (132)
T ss_dssp EEEEECEEEETTEEEEECCCEEEECCS
T ss_pred EEEEEEEEEcCCccCCCCcCEEeEcCc
Confidence 99999863 35667888866
No 90
>1wk0_A KIAA0970 protein; fibronectin type III domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=96.10 E-value=0.01 Score=49.42 Aligned_cols=32 Identities=16% Similarity=0.264 Sum_probs=26.0
Q ss_pred EEEEECCCCCCCEEEEEeCc--------cCceeEEECCCC
Q 012895 113 HHVKIGPLEPATTYYYRCGG--------RGPEFSFKMPPA 144 (454)
Q Consensus 113 ~~~~l~gL~p~t~Y~Yrv~~--------~s~~~~F~T~p~ 144 (454)
..++|+||+|+|.|.+||.. .|....|+|++.
T Consensus 82 ts~~v~~L~P~T~Y~~rV~A~n~~G~G~~S~~~~f~T~~~ 121 (137)
T 1wk0_A 82 TNITLNDLKPAMDYHAKVQAEYNSIKGTPSEAEIFTTLSC 121 (137)
T ss_dssp SEEEECSCCTTCEECEEEEEEETTEECCCCCCCCEECCCS
T ss_pred cEEEEcCCCCCCEEEEEEEEEeCCCcCCCCCCEEEECCCC
Confidence 45789999999999999953 356778999764
No 91
>3tes_A Tencon; fibronectin type III domain, FN3, consensus design, de novo; 2.50A {Synthetic}
Probab=96.09 E-value=0.026 Score=43.65 Aligned_cols=70 Identities=20% Similarity=0.366 Sum_probs=44.5
Q ss_pred CCeeEEEEecCCCcEEEEEEeCCCC-CccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEEEEeC
Q 012895 53 DPQQVHISLAAKDYIRVSWITDDKE-AESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYYYRCG 131 (454)
Q Consensus 53 ~p~~v~l~~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Yrv~ 131 (454)
+|..+.+.....+++.|+|..+..+ ..-.|+|........... .. ..+-.-.+.|+||+|+|.|.++|.
T Consensus 4 ~P~~l~v~~~t~~Sv~lsW~~p~~~i~~Y~v~y~~~~~~~~~~~----~~------~~~~~t~~~l~gL~P~t~Y~~~V~ 73 (98)
T 3tes_A 4 APKNLVVSEVTEDSLRLSWTAPDAAFDSFMIQYQESEKVGEAIN----LT------VPGSERSYDLTGLKPGTEYTVSIY 73 (98)
T ss_dssp CCEEEEEESCCSSCEEEEEECCTTSCSEEEEEEEETTBCSCCEE----EE------EETTCSEEEECSCCTTCEEEEEEE
T ss_pred CCCceEEEecCCCeEEEEecCCcCccceEEEEEEECCCCCceEE----EE------cCCCcCEEEECCCCCCCEEEEEEE
Confidence 4667777766689999999977532 234677776542111110 00 111233578999999999999986
Q ss_pred c
Q 012895 132 G 132 (454)
Q Consensus 132 ~ 132 (454)
.
T Consensus 74 A 74 (98)
T 3tes_A 74 G 74 (98)
T ss_dssp E
T ss_pred E
Confidence 4
No 92
>2yuw_A Myosin binding protein C, SLOW type; fibronectin III domain, SLOW- type protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.08 E-value=0.023 Score=44.68 Aligned_cols=71 Identities=18% Similarity=0.189 Sum_probs=44.3
Q ss_pred CCCeeEEEEecCCCcEEEEEEeCCCC-C----ccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEE
Q 012895 52 SDPQQVHISLAAKDYIRVSWITDDKE-A----ESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTY 126 (454)
Q Consensus 52 ~~p~~v~l~~~~~~~~~v~W~t~~~~-~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y 126 (454)
..|..+.+.....+++.|.|...... . .-.|+|.......+.... . ........+|++|+|++.|
T Consensus 9 ~~P~~l~~~~~~~~sv~l~W~~p~~~g~~~i~~Y~v~~~~~~~~~w~~~~-~---------~~~~~~~~~v~~L~p~t~Y 78 (110)
T 2yuw_A 9 SPPTLLTVDSVTDTTVTMRWRPPDHIGAAGLDGYVLEYCFEGTEDWIVAN-K---------DLIDKTKFTITGLPTDAKI 78 (110)
T ss_dssp CCCEEEEEEEECSSCEEEEEECCSSCCSSCEEEEEEEEEETTCSSEEECC-S---------SCCCSSEEEECSCCTTCEE
T ss_pred CCCCccEEEeccCCeEEEEECCCCCCCCCCccEEEEEEEECCCccceEec-c---------ccCccCEEEECCCCCCCEE
Confidence 46777778777789999999976432 1 134556554332221110 0 1112334678999999999
Q ss_pred EEEeCc
Q 012895 127 YYRCGG 132 (454)
Q Consensus 127 ~Yrv~~ 132 (454)
.|||..
T Consensus 79 ~frV~A 84 (110)
T 2yuw_A 79 FVRVKA 84 (110)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 999974
No 93
>1x3d_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=96.03 E-value=0.029 Score=44.64 Aligned_cols=81 Identities=19% Similarity=0.243 Sum_probs=48.8
Q ss_pred CCeeEEEEecCCCcEEEEEEeCCCCCcc----EEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEEE
Q 012895 53 DPQQVHISLAAKDYIRVSWITDDKEAES----VVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYYY 128 (454)
Q Consensus 53 ~p~~v~l~~~~~~~~~v~W~t~~~~~~~----~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y 128 (454)
.|..+.+.....+++.|.|......... .|+|.............. ... ..++|.+|+|++.|.|
T Consensus 20 ~P~~~~~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~---------~~~--~~~~v~~L~p~t~Y~f 88 (118)
T 1x3d_A 20 IPNPPRIANRTKNSLTLQWKAPSDNGSKIQNFVLEWDEGKGNGEFCQCYM---------GSQ--KQFKITKLSPAMGCKF 88 (118)
T ss_dssp CCCCCEEEEEETTEEEEECCCCCCCSSCEEEEEEEECTTTSSSCCEEEEE---------ESC--SEEEEESCCTTCEEEE
T ss_pred CCCCcEEeccCCCEEEEEECCCCCCCCcceEEEEEEecCCCCCCeEEeec---------cCC--cEEEeCCCCCCCEEEE
Confidence 4566667666688999999887533333 344543332111111100 111 3457899999999999
Q ss_pred EeCc--------cCceeEEECCCC
Q 012895 129 RCGG--------RGPEFSFKMPPA 144 (454)
Q Consensus 129 rv~~--------~s~~~~F~T~p~ 144 (454)
||.. .+....|+|.+.
T Consensus 89 rV~A~n~~G~s~~S~~~~~~T~~~ 112 (118)
T 1x3d_A 89 RLSARNDYGTSGFSEEVLYYTSGC 112 (118)
T ss_dssp ECCEEESSCBCCCCCCEEEECSCC
T ss_pred EEEEEECCCCCCCccCEEEEcCCC
Confidence 9963 245667777653
No 94
>2cuh_A Tenascin-X; fibronectin type III domain, extracellular matrix, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=96.00 E-value=0.041 Score=43.75 Aligned_cols=81 Identities=12% Similarity=0.136 Sum_probs=50.2
Q ss_pred CCCeeEEEEecCCCcEEEEEEeCCCC-CccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEEEEe
Q 012895 52 SDPQQVHISLAAKDYIRVSWITDDKE-AESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYYYRC 130 (454)
Q Consensus 52 ~~p~~v~l~~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Yrv 130 (454)
..|..+++.....+++.|+|.-+... ..-.|+|........ .. . ..+-...+.|++|+|+|.|.++|
T Consensus 9 ~~P~~l~~~~~t~~sv~lsW~~p~~~i~~Y~v~y~~~~~~~~-~~-------~----v~~~~t~~~l~~L~P~t~Y~~~V 76 (115)
T 2cuh_A 9 DGPTQLRALNLTEGFAVLHWKPPQNPVDTYDIQVTAPGAPPL-QA-------E----TPGSAVDYPLHDLVLHTNYTATV 76 (115)
T ss_dssp SSCEEEECCCCSSSCEEEEEECCSSCCSEEEEEEECSSSCCE-EE-------E----EETTCSEEEECSCCSSSEEEEEE
T ss_pred CCCcceEEEeccCCeEEEEEECCCCCccEEEEEEEcCCCCcE-EE-------E----ECCCccEEEEeCCCCCCEEEEEE
Confidence 45677777666689999999876422 234577765432111 10 0 11123457899999999999998
Q ss_pred Cc-------cCceeEEECCCC
Q 012895 131 GG-------RGPEFSFKMPPA 144 (454)
Q Consensus 131 ~~-------~s~~~~F~T~p~ 144 (454)
.. ......|+|.+.
T Consensus 77 ~A~~~~~~s~~~~~~~~T~~~ 97 (115)
T 2cuh_A 77 RGLRGPNLTSPASITFTTGLE 97 (115)
T ss_dssp EEEETTEECCCEEEEEESCCC
T ss_pred EEEeCCCcCCCEEEEEEeCCC
Confidence 63 123456888653
No 95
>3teu_A Fibcon; FN3 domain, fibronectin TPYE III domain, consensus design, S de novo protein; HET: DIO; 1.00A {Synthetic}
Probab=96.00 E-value=0.047 Score=41.86 Aligned_cols=71 Identities=17% Similarity=0.244 Sum_probs=46.1
Q ss_pred CCCeeEEEEecCCCcEEEEEEeCCCC-CccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEEEEe
Q 012895 52 SDPQQVHISLAAKDYIRVSWITDDKE-AESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYYYRC 130 (454)
Q Consensus 52 ~~p~~v~l~~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Yrv 130 (454)
..|..+.+.....+++.|+|..+... ..-.|+|............ . ...-...+.|.+|+|++.|.++|
T Consensus 3 ~~P~~l~v~~~~~~sv~l~W~~p~~~i~~Y~v~y~~~~~~~~~~~~----~------~~~~~~~~~i~~L~p~t~Y~~~V 72 (98)
T 3teu_A 3 DAPTDLQVTNVTDTSITVSWTPPSATITGYRITYTPSNGPGEPKEL----T------VPPSSTSVTITGLTPGVEYVVSV 72 (98)
T ss_dssp CCCEEEEEEEECSSCEEEEEECCSSCCSEEEEEEEETTSCSCCEEE----E------ECTTCSEEEECSCCTTCEEEEEE
T ss_pred CCCCceEEEEecCCEEEEEEeCCCCcccEEEEEEEECCCCCceEEE----E------cCCCcCEEEecCCCCCCEEEEEE
Confidence 35778888877789999999987432 2346778754332111110 0 11223457899999999999999
Q ss_pred Cc
Q 012895 131 GG 132 (454)
Q Consensus 131 ~~ 132 (454)
..
T Consensus 73 ~A 74 (98)
T 3teu_A 73 YA 74 (98)
T ss_dssp EE
T ss_pred EE
Confidence 64
No 96
>2dlh_A Receptor-type tyrosine-protein phosphatase delta; protein-tyrosine phosphatase delta, R-PTP-delta, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=95.98 E-value=0.013 Score=46.89 Aligned_cols=83 Identities=19% Similarity=0.269 Sum_probs=50.8
Q ss_pred CCCCeeEEEEecCCCcEEEEEEeCCCCCcc----EEEEeecCCCC--ceEEEeEeEEEeeeeeecCeEEEEEECCCCCCC
Q 012895 51 ESDPQQVHISLAAKDYIRVSWITDDKEAES----VVEYGKLPGRY--NTVATGEHTSYQFFFYKSGKIHHVKIGPLEPAT 124 (454)
Q Consensus 51 ~~~p~~v~l~~~~~~~~~v~W~t~~~~~~~----~v~y~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t 124 (454)
...|..+.+.....+++.|.|......... .|+|....... ..... ...-...+.|++|+|+|
T Consensus 19 ~~~P~~l~~~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~~-----------~~~~~~~~~i~~L~p~t 87 (121)
T 2dlh_A 19 SSAPRDVQARMLSSTTILVQWKEPEEPNGQIQGYRVYYTMDPTQHVNNWMKH-----------NVADSQITTIGNLVPQK 87 (121)
T ss_dssp CSCCEEEEECCCSSSBCCEEEECCSCCCSCEEEEEEECCSCTTSCTTTSCCC-----------CCSSCSEECCBSCCSSC
T ss_pred CCCCcccEEEecCCCEEEEEECCCCCCCCcEeEEEEEEEeCCCCCccccEEE-----------ecCCceEEEecCCCCCC
Confidence 346777777766789999999987533222 34444332110 00000 01123356889999999
Q ss_pred EEEEEeCc--------cCceeEEECCCC
Q 012895 125 TYYYRCGG--------RGPEFSFKMPPA 144 (454)
Q Consensus 125 ~Y~Yrv~~--------~s~~~~F~T~p~ 144 (454)
.|.+||.. .+....|+|++.
T Consensus 88 ~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 115 (121)
T 2dlh_A 88 TYSVKVLAFTSIGDGPLSSDIQVITQTG 115 (121)
T ss_dssp EEEEEEEEEESSCBCCCCCCEEEECCCC
T ss_pred EEEEEEEEEeCCccCCCCCCEEEECCCC
Confidence 99999953 355678888653
No 97
>1x4z_A Biregional cell adhesion molecule-related/DOWN- regulated oncogenes (CDON)binding...; fibronectin type III, FN3; NMR {Mus musculus} SCOP: b.1.2.1
Probab=95.98 E-value=0.027 Score=45.12 Aligned_cols=72 Identities=28% Similarity=0.338 Sum_probs=45.0
Q ss_pred CCCeeEEEEecCCCcEEEEEEeCCCC----CccEEEEeecC-CCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEE
Q 012895 52 SDPQQVHISLAAKDYIRVSWITDDKE----AESVVEYGKLP-GRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTY 126 (454)
Q Consensus 52 ~~p~~v~l~~~~~~~~~v~W~t~~~~----~~~~v~y~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y 126 (454)
..|..+.+.....+++.|.|.-.... ..-.|+|.... ...+...... ...-...++|++|+|++.|
T Consensus 19 ~~P~~~~~~~~~~~sv~l~W~p~~~~~~~i~~Y~v~~~~~~~~~~w~~~~~~---------~~~~~~~~~v~~L~p~t~Y 89 (121)
T 1x4z_A 19 EAPDRPTISTASETSVYVTWIPRGNGGFPIQSFRVEYKKLKKVGDWILATSA---------IPPSRLSVEITGLEKGISY 89 (121)
T ss_dssp CCCCCCEEEECCSSEEEEECCCCCCTTSCCCEEEEEEEESSSCCCCEEEEEE---------ECTTCCEEEEESCCTTCEE
T ss_pred ccCCCCEEEEccCCEEEEEEECCCCCCCcceEEEEEEEECCCCCceEEeecc---------cCCCcCEEEECCCCCCCEE
Confidence 45666777777788999999844322 23467777654 2222222111 1222345678999999999
Q ss_pred EEEeCc
Q 012895 127 YYRCGG 132 (454)
Q Consensus 127 ~Yrv~~ 132 (454)
.|||..
T Consensus 90 ~frV~A 95 (121)
T 1x4z_A 90 KFRVRA 95 (121)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 999964
No 98
>3k2m_C Monobody HA4; engineered binding protein, antibody mimic, protein-protein SH2 domain, ATP-binding, phosphoprotein; 1.75A {Homo sapiens} PDB: 3uyo_D 1ttf_A 1ttg_A 3rzw_A 1fna_A
Probab=95.95 E-value=0.032 Score=43.32 Aligned_cols=69 Identities=17% Similarity=0.188 Sum_probs=45.0
Q ss_pred CCeeEEEEecCCCcEEEEEEeCCC---CCccEEEEeecCCCC-ceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEEE
Q 012895 53 DPQQVHISLAAKDYIRVSWITDDK---EAESVVEYGKLPGRY-NTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYYY 128 (454)
Q Consensus 53 ~p~~v~l~~~~~~~~~v~W~t~~~---~~~~~v~y~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y 128 (454)
.|..+++.....+++.|.|..+.. ...-.|+|....+.. ..... ...-...++|+||+|+|.|.+
T Consensus 7 ~P~~l~v~~~t~~Sv~l~W~~p~~~~~i~~Y~v~y~~~~~~~~~~~~~-----------v~~~~t~~~l~~L~p~t~Y~~ 75 (101)
T 3k2m_C 7 VPTKLEVVAATPTSLLISWDAPMSSSSVYYYRITYGETGGNSPVQEFT-----------VPYSSSTATISGLSPGVDYTI 75 (101)
T ss_dssp SSCEEEEEEEETTEEEEEECCCCTTSCCCEEEEEEEETTCSSCCEEEE-----------EETTCCEEEECSCCTTCEEEE
T ss_pred CCcceEEeecCCCEEEEEecCCCCCCceeeEEEEEEECCCCCccEEEE-----------cCCCccEEEECCCCCCCEEEE
Confidence 567788877779999999987641 123467777654321 11110 011234678999999999999
Q ss_pred EeCc
Q 012895 129 RCGG 132 (454)
Q Consensus 129 rv~~ 132 (454)
+|..
T Consensus 76 ~V~A 79 (101)
T 3k2m_C 76 TVYA 79 (101)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9864
No 99
>2kbg_A N-CAM 2, neural cell adhesion molecule 2; fibronectin type III module, beta-sheet sandwich, cell membrane, glycoprotein, immunoglobulin domain; NMR {Homo sapiens}
Probab=95.95 E-value=0.016 Score=46.56 Aligned_cols=73 Identities=18% Similarity=0.289 Sum_probs=45.8
Q ss_pred cCCCcEEEEEEeCCCCC----ccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEEEEeCc-----
Q 012895 62 AAKDYIRVSWITDDKEA----ESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYYYRCGG----- 132 (454)
Q Consensus 62 ~~~~~~~v~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Yrv~~----- 132 (454)
.+.+++.|.|......+ .-.|+|.......+..... .++-...++|.+|+|++.|.+||..
T Consensus 19 ~~~~sv~L~W~p~~dggsPI~~Y~I~yr~~~~~~w~~~~~----------~~~~~~~~~l~~L~p~t~Y~frV~A~N~~G 88 (114)
T 2kbg_A 19 SSGKSFKLSITKQDDGGAPILEYIVKYRSKDKEDQWLEKK----------VQGNKDHIILEHLQWTMGYEVQITAANRLG 88 (114)
T ss_dssp CSTTCEEEEECCCCCSSSCCSEEEEEEEESSCCSCCEEEE----------EETTTCCEEECCCCTTCCEEEEEEEECTTS
T ss_pred cCCCEEEEEEECCCCCCCcccEEEEEEEeCCCCCcEEeEE----------cCCCcCEEEEcCCCCCCEEEEEEEEEeCCc
Confidence 35899999997643222 2478888764433332211 1112234679999999999999964
Q ss_pred --cCceeEEECCCC
Q 012895 133 --RGPEFSFKMPPA 144 (454)
Q Consensus 133 --~s~~~~F~T~p~ 144 (454)
......|+|++.
T Consensus 89 ~s~pS~~~~~T~~~ 102 (114)
T 2kbg_A 89 YSEPTVYEFSMPPK 102 (114)
T ss_dssp CEEEEEEEECCCCC
T ss_pred CcCCcCCEEEcCCC
Confidence 123467888664
No 100
>3p4l_A Neogenin; iron homeostasis, hemojuvelin receptor, FNIII domain, fibron type III, cell adhesion; 1.80A {Homo sapiens} PDB: 1x5k_A
Probab=95.94 E-value=0.047 Score=48.19 Aligned_cols=83 Identities=14% Similarity=0.124 Sum_probs=52.5
Q ss_pred CCCCCeeEEEEecCCCcEEEEEEeCCC--------CCccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCC
Q 012895 50 SESDPQQVHISLAAKDYIRVSWITDDK--------EAESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLE 121 (454)
Q Consensus 50 ~~~~p~~v~l~~~~~~~~~v~W~t~~~--------~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~ 121 (454)
+...|..+.+.....+++.|+|.-+.. ...-.|+|............. ..-...+.|++|+
T Consensus 4 P~~~P~~l~~~~~~~~si~l~W~~p~~~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~-----------~~~~~~~~i~~L~ 72 (211)
T 3p4l_A 4 PMMPPVGVQASILSHDTIRITWADNSLPKHQKITDSRYYTVRWKTNIPANTKYKNA-----------NATTLSYLVTGLK 72 (211)
T ss_dssp CCCCCEEEEEEECSSSCEEEEEECTTSCTTCCCCSSCEEEEEEEECC---CCCEEE-----------EESSSEEEECSCC
T ss_pred CCCCCCCEEEEecCCCeEEEEEeCCCCCcccccCCCcEEEEEEEECCCCcceEEEe-----------CCCceEEEecCcC
Confidence 345788888888889999999997431 123567776544321111110 1113356789999
Q ss_pred CCCEEEEEeCc--------cCceeEEECCC
Q 012895 122 PATTYYYRCGG--------RGPEFSFKMPP 143 (454)
Q Consensus 122 p~t~Y~Yrv~~--------~s~~~~F~T~p 143 (454)
|+|.|.++|.. .+....|+|++
T Consensus 73 p~t~Y~~~V~A~n~~g~~~~S~~~~~~t~~ 102 (211)
T 3p4l_A 73 PNTLYEFSVMVTKGRRSSTWSMTAHGTTFE 102 (211)
T ss_dssp TTCEEEEEEEEEETTEECCCCCCEEEECCC
T ss_pred CCCEEEEEEEEEcCCCCCccceeEeeeccc
Confidence 99999999863 24567788854
No 101
>2ic2_A CG9211-PA, GH03927P; IHOG, hedgehog, fibronectin type III, protein binding; HET: MSE; 1.30A {Drosophila melanogaster} SCOP: b.1.2.1
Probab=95.94 E-value=0.057 Score=43.15 Aligned_cols=73 Identities=15% Similarity=0.288 Sum_probs=38.2
Q ss_pred EEecCCCcEEEEEEeCCCCCcc----EEEEeecCC-CCceEEEeEeEEEeee--eeecCeEEEEEECCCCCCCEEEEEeC
Q 012895 59 ISLAAKDYIRVSWITDDKEAES----VVEYGKLPG-RYNTVATGEHTSYQFF--FYKSGKIHHVKIGPLEPATTYYYRCG 131 (454)
Q Consensus 59 l~~~~~~~~~v~W~t~~~~~~~----~v~y~~~~~-~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~gL~p~t~Y~Yrv~ 131 (454)
+.....+++.|.|.-+...+.. .|+|...+. ..+.... ....+... ....+-...++|++|+|++.|.+||.
T Consensus 11 v~~~~~~sv~L~W~~P~~~G~pI~~Y~Ve~r~~~~~~~w~~~~-~~~~~~~~~~~~~~~~~~~~~v~~L~p~t~Y~FRV~ 89 (115)
T 2ic2_A 11 VTRLSDESVMLRWMVPRNDGLPIVIFKVQYRMVGKRKNWQTTN-DNIPYGKPKWNSELGKSFTASVTDLKPQHTYRFRIL 89 (115)
T ss_dssp EEECC---EEEEEEEECCSSCCEEEEEEEEEECC---CCEEEE-EEEECCSCSCSSSSEEEEEEEECSCCSSEEEEEEEE
T ss_pred eEEEeCCEEEEEEcCCCCCCCCCceEEEEEEECCCCCCceECc-ccccccccccccccCceeEEEeCCCCCCCEEEEEEE
Confidence 5556688999999987544443 455655421 2222221 11110000 00112334678999999999999996
Q ss_pred c
Q 012895 132 G 132 (454)
Q Consensus 132 ~ 132 (454)
.
T Consensus 90 A 90 (115)
T 2ic2_A 90 A 90 (115)
T ss_dssp E
T ss_pred E
Confidence 4
No 102
>2crz_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=95.88 E-value=0.022 Score=44.86 Aligned_cols=80 Identities=13% Similarity=0.110 Sum_probs=47.4
Q ss_pred CCeeEEEE-ecCCCcEEEEEEeCCC-C----CccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEE
Q 012895 53 DPQQVHIS-LAAKDYIRVSWITDDK-E----AESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTY 126 (454)
Q Consensus 53 ~p~~v~l~-~~~~~~~~v~W~t~~~-~----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y 126 (454)
.|..+.+. ....+++.|.|..... . ..-.|+|.......+..... . ....++|++|+|++.|
T Consensus 11 ~P~~~~~~~~~~~~sv~l~W~~P~~~~~~~i~~Y~v~~~~~~~~~~~~~~~----------~--~~~~~~v~~L~p~t~Y 78 (110)
T 2crz_A 11 PCLPPRLQGRPKAKEIQLRWGPPLVDGGSPISCYSVEMSPIEKDEPREVYQ----------G--SEVECTVSSLLPGKTY 78 (110)
T ss_dssp CCCCCEECSCCCSSEEEEECCCCSCCTTSCCCEEEEEEECTTSCCCEEEEE----------E--SCSEEEEESCCTTCEE
T ss_pred CCCCceeccccCCCEEEEEeCCCCCCCCceeEEEEEEEEeCCCCceEEEEe----------C--CcEEEEECCcCCCCEE
Confidence 44555553 3347899999976532 1 23467776543332222210 1 1234578999999999
Q ss_pred EEEeCc--------cCceeEEECCCC
Q 012895 127 YYRCGG--------RGPEFSFKMPPA 144 (454)
Q Consensus 127 ~Yrv~~--------~s~~~~F~T~p~ 144 (454)
.|||.. .+....++|.+.
T Consensus 79 ~frV~A~n~~G~g~~S~~~~~~T~~~ 104 (110)
T 2crz_A 79 SFRLRAANKMGFGPFSEKCDITTAPG 104 (110)
T ss_dssp EECCEEECSSCBCCCCCCEEEECCCS
T ss_pred EEEEEEEcCCccCCCCCccccccCCC
Confidence 999963 345667777553
No 103
>1uen_A KIAA0343 protein; immunoglobulin-like beta-sandwich fold, fibronectin type III, NG-CAM related cell adhesion molecule, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=95.85 E-value=0.026 Score=45.36 Aligned_cols=88 Identities=17% Similarity=0.212 Sum_probs=52.2
Q ss_pred CCCCeeEEEEecCCCcEEEEEEeCCC---C---CccEEEEeecCCCCc---eEEEeEeEEEeeeeeecCeEEEEEECCCC
Q 012895 51 ESDPQQVHISLAAKDYIRVSWITDDK---E---AESVVEYGKLPGRYN---TVATGEHTSYQFFFYKSGKIHHVKIGPLE 121 (454)
Q Consensus 51 ~~~p~~v~l~~~~~~~~~v~W~t~~~---~---~~~~v~y~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~l~gL~ 121 (454)
...|..+++.....+++.|.|..... . ..-.|+|........ ......... ..+-...+.|++|+
T Consensus 15 ~~~P~~l~~~~~~~~sv~l~W~~p~~~~~~g~i~gY~v~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~i~~L~ 88 (125)
T 1uen_A 15 MVAPGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRNRRHIEKKILT------FQGSKTHGMLPGLE 88 (125)
T ss_dssp CCCCSSCEEEEEETTEEEEECCCCCHHHHCSCEEEEEEEEEEESCCCCSTTCCCCEEEEE------EESSCSEEEEESCC
T ss_pred CCCCceeEEEecCCcEEEEEEcCCCchhcCceEeEEEEEEEECCCCcccccccccceEEE------ecCCccEEEeCCCC
Confidence 34677777777678899999987631 1 123556655443221 000000001 11223467889999
Q ss_pred CCCEEEEEeCc--------cCceeEEECCCC
Q 012895 122 PATTYYYRCGG--------RGPEFSFKMPPA 144 (454)
Q Consensus 122 p~t~Y~Yrv~~--------~s~~~~F~T~p~ 144 (454)
|+|.|.+||.. .+....|+|++.
T Consensus 89 p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 119 (125)
T 1uen_A 89 PFSHYTLNVRVVNGKGEGPASPDRVFNTPEG 119 (125)
T ss_dssp SSCEEEEEEEEEESSCEEEECCCEEEECCCC
T ss_pred CCCEEEEEEEEecCCCCCCCCCCEEEECCCC
Confidence 99999999863 245677888653
No 104
>2e3v_A Neural cell adhesion molecule 1, 140 kDa isoform; NCAM, N-CAM 1, NCAM-120, CD56 antigen, membra protein, glycoprotein, structural genomics, NPPSFA; HET: PGE BTB; 1.95A {Homo sapiens}
Probab=95.85 E-value=0.06 Score=43.31 Aligned_cols=84 Identities=17% Similarity=0.152 Sum_probs=48.9
Q ss_pred CCeeEEEEecCCCcEEEEEEeCCCCC-c----cEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEE
Q 012895 53 DPQQVHISLAAKDYIRVSWITDDKEA-E----SVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYY 127 (454)
Q Consensus 53 ~p~~v~l~~~~~~~~~v~W~t~~~~~-~----~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~ 127 (454)
.|..+.+.....+ +.|.|.-..... . -.|+|.......+....... . ...-...++|++|+|+|.|.
T Consensus 10 ~P~~~~~~~~~~t-v~l~W~~P~~~~G~pI~~Y~v~~~~~~~~~~~~~~~~~---~----~~~~~~~~~i~~L~p~t~Y~ 81 (122)
T 2e3v_A 10 SPSIDQVEPYSST-AQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYDA---K----EASMEGIVTIVGLKPETTYA 81 (122)
T ss_dssp CCEEEEEEECSSC-EEEEEECCCCC--CCEEEEEEEEEETTCCSCEEEEEEH---H----HHHTTTEEEECSCCTTCEEE
T ss_pred CCCccEEEecCCc-EEEEECCCCcCCCCcceEEEEEEEECCCCCcccceeee---e----ecCccceEEeCCCCCCCEEE
Confidence 3777777766666 999999774322 2 34556554432221110000 0 01112356789999999999
Q ss_pred EEeCc--------cCceeEEECCCC
Q 012895 128 YRCGG--------RGPEFSFKMPPA 144 (454)
Q Consensus 128 Yrv~~--------~s~~~~F~T~p~ 144 (454)
+||.. .+....|+|.|.
T Consensus 82 ~rV~A~n~~G~g~~S~~~~~~t~~~ 106 (122)
T 2e3v_A 82 VRLAALNGKGLGEISAASEFKTQPV 106 (122)
T ss_dssp EEEEEEETTEECCCCCCEEEECCCC
T ss_pred EEEEEEeCCccCCCcccccccccCC
Confidence 99963 245566777553
No 105
>3mpc_A FN3-like protein; fibronectin, FN(III), unknown function; 1.60A {Clostridium thermocellum}
Probab=95.83 E-value=0.051 Score=42.61 Aligned_cols=68 Identities=21% Similarity=0.294 Sum_probs=40.5
Q ss_pred CCCeeEEEEec-CCCcEEEEEEeCCCCCccEEEEeecC--CCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEEE
Q 012895 52 SDPQQVHISLA-AKDYIRVSWITDDKEAESVVEYGKLP--GRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYYY 128 (454)
Q Consensus 52 ~~p~~v~l~~~-~~~~~~v~W~t~~~~~~~~v~y~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y 128 (454)
.+|..+.+... +.+++.|+|..... ......|.... ..+...+.+.. .. ..+.++|++|++|+|
T Consensus 6 ~aP~~l~a~~~~~~~~v~LsW~~~~~-~~~Y~VyR~~~~~~~~~~i~~~~~--------~t----sy~d~~l~~g~~Y~Y 72 (103)
T 3mpc_A 6 AFPTGLSAVLDSSGNTANLTWNAAPG-ANSYNVKRSTKSGGPYTTIATNIT--------ST----NYTDTGVATGTKYYY 72 (103)
T ss_dssp CCCEEEEEEECTTSCCEEEEEECCTT-CSEEEEEEESSTTCCCEEEEEEEC--------SS----EEEETTCCTTCCCEE
T ss_pred CCCceeEEEEeCCCCEEEEEEECCCC-CCEEEEEEecCCCCCcEEEeecCC--------CC----EEEECCCCCCCEEEE
Confidence 46777777765 36789999998753 34444454432 22233222110 11 123479999999999
Q ss_pred EeCc
Q 012895 129 RCGG 132 (454)
Q Consensus 129 rv~~ 132 (454)
+|..
T Consensus 73 ~V~A 76 (103)
T 3mpc_A 73 VVSA 76 (103)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9963
No 106
>2cum_A Tenascin-X; hexabrachion-like, fibronectin type III domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=95.81 E-value=0.098 Score=40.80 Aligned_cols=80 Identities=16% Similarity=0.201 Sum_probs=51.0
Q ss_pred CCCeeEEEEecCCCcEEEEEEeCCCC-CccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEEEEe
Q 012895 52 SDPQQVHISLAAKDYIRVSWITDDKE-AESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYYYRC 130 (454)
Q Consensus 52 ~~p~~v~l~~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Yrv 130 (454)
..|..+++.....+++.|+|.-.... ..-.|+|....+. .... . ...-...+.|++|+|+|.|.++|
T Consensus 9 ~~P~~l~v~~~~~~sv~lsW~~p~~~i~~Y~i~y~~~~~~-~~~~-------~----~~~~~ts~~l~~L~p~t~Y~~~V 76 (105)
T 2cum_A 9 EAPRDLEAKEVTPRTALLTWTEPPVRPAGYLLSFHTPGGQ-TQEI-------L----LPGGITSHQLLGLFPSTSYNARL 76 (105)
T ss_dssp CCCEEEEEESCCSSCEEEEEECCSSCCSEEEEEEECTTSC-EEEE-------E----ECSSCSEEEECSCCTTCEEEEEE
T ss_pred CCCCceEEEeccCCEEEEEEcCCCCccceEEEEEEeCCCc-eEEE-------E----ECCCccEEEECCCCCCCEEEEEE
Confidence 45777777777789999999876422 2345777654321 1111 0 11223467899999999999998
Q ss_pred Cc-------cCceeEEECCC
Q 012895 131 GG-------RGPEFSFKMPP 143 (454)
Q Consensus 131 ~~-------~s~~~~F~T~p 143 (454)
.. ......|+|..
T Consensus 77 ~A~~~~g~s~~~~~~~~T~~ 96 (105)
T 2cum_A 77 QAMWGQSLLPPVSTSFTTGG 96 (105)
T ss_dssp EEEBTTBCCCCEEEEEECCC
T ss_pred EEEeCCcccCCEEEEEEeCC
Confidence 63 23456788854
No 107
>3qwq_B Adnectin; cell surface receptor, tyrosine kinase, glycoprotein, adnect antitumor, drug, engineered binding protein; HET: NAG BMA MAN FUC; 2.75A {Homo sapiens} PDB: 3qwr_D*
Probab=95.67 E-value=0.048 Score=43.58 Aligned_cols=71 Identities=20% Similarity=0.374 Sum_probs=46.7
Q ss_pred CCCeeEEEEecCCCcEEEEEEeCCCC-CccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEEEEe
Q 012895 52 SDPQQVHISLAAKDYIRVSWITDDKE-AESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYYYRC 130 (454)
Q Consensus 52 ~~p~~v~l~~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Yrv 130 (454)
..|..+.+.....+++.|+|...... ..-.|+|....+..... . .. ..+-...++|+||+|+|.|.++|
T Consensus 5 ~~P~~L~v~~~t~~Sv~lsW~~p~g~i~~Y~v~y~~~~~~~~~~---~---~~----v~~~~ts~~l~gL~P~T~Y~v~V 74 (114)
T 3qwq_B 5 DVPRDLEVVAATPTSLLISWDSGRGSYQYYRITYGETGGNSPVQ---E---FT----VPGPVHTATISGLKPGVDYTITV 74 (114)
T ss_dssp CCCEEEEEEEEETTEEEEEEECCSCCCSEEEEEEEESSCSSCCE---E---EE----EETTCCEEEECSCCTTCEEEEEE
T ss_pred CCCCceEEEecCCCEEEEEEcCCcCcccEEEEEEEECCCCCccE---E---EE----eCCCcCEEEeCCCCCCCEEEEEE
Confidence 46778888877799999999886422 34567787654321110 0 00 11223457899999999999998
Q ss_pred Cc
Q 012895 131 GG 132 (454)
Q Consensus 131 ~~ 132 (454)
..
T Consensus 75 ~A 76 (114)
T 3qwq_B 75 YA 76 (114)
T ss_dssp EE
T ss_pred EE
Confidence 64
No 108
>1qr4_A Protein (tenascin); fibronectin type-III, heparin, extracellular matrix, adhesion, fusion protein, structural protein; 2.55A {Gallus gallus} SCOP: b.1.2.1 b.1.2.1
Probab=95.65 E-value=0.054 Score=46.71 Aligned_cols=83 Identities=19% Similarity=0.211 Sum_probs=50.5
Q ss_pred CCCCeeEEEEecCCCcEEEEEEeCCCC-CccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEEEE
Q 012895 51 ESDPQQVHISLAAKDYIRVSWITDDKE-AESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYYYR 129 (454)
Q Consensus 51 ~~~p~~v~l~~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Yr 129 (454)
...|..+.+.....+++.|.|.-.... ..-.|+|............ ..+-...+.|++|+|++.|.++
T Consensus 95 p~~P~~l~~~~~~~~sv~l~W~~p~~~i~~Y~v~~~~~~~~~~~~~~-----------~~~~~~~~~i~~L~p~t~Y~~~ 163 (186)
T 1qr4_A 95 VGSPKGISFSDITENSATVSWTPPRSRVDSYRVSYVPITGGTPNVVT-----------VDGSKTRTKLVKLVPGVDYNVN 163 (186)
T ss_dssp CCCCSCEEEESCCSSCEEEEECCCSSCCSEEEEEEEETTCCCCEEEE-----------EETTCCEEEECSCCSSCEEEEE
T ss_pred CCCCCccEEEEeCCCEEEEEEECCCCcccEEEEEEEeCCCCCceEEE-----------cCCCcCEEEEcCCCCCCEEEEE
Confidence 346677777766789999999876422 3346667655432111111 1112345678999999999999
Q ss_pred eCc-------cCceeEEECCCC
Q 012895 130 CGG-------RGPEFSFKMPPA 144 (454)
Q Consensus 130 v~~-------~s~~~~F~T~p~ 144 (454)
|.. ......|+|+|+
T Consensus 164 V~A~~~~g~s~p~~~~~~T~pd 185 (186)
T 1qr4_A 164 IISVKGFEESEPISGILKTALD 185 (186)
T ss_dssp EEEEETTEECCCEEEEEEC---
T ss_pred EEEEcCCCcCcCEEEEEEecCC
Confidence 963 234557888763
No 109
>1x5y_A Myosin binding protein C, fast-type; fast MYBP-C, fibronectin type III domain containing protein, cytoskeleton, muscle contraction; NMR {Mus musculus} SCOP: b.1.2.1
Probab=95.63 E-value=0.028 Score=44.30 Aligned_cols=71 Identities=17% Similarity=0.214 Sum_probs=44.9
Q ss_pred CCCeeEEEEecCCCcEEEEEEeCCCC-----CccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEE
Q 012895 52 SDPQQVHISLAAKDYIRVSWITDDKE-----AESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTY 126 (454)
Q Consensus 52 ~~p~~v~l~~~~~~~~~v~W~t~~~~-----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y 126 (454)
..|..+.+.....+++.|.|.-.... ..-.|+|.......+.... . ...-...++|++|+|++.|
T Consensus 10 ~~P~~l~~~~~~~~sv~l~W~~p~~~~~~~i~~Y~v~~~~~~~~~w~~~~-~---------~~~~~~~~~v~~L~p~t~Y 79 (111)
T 1x5y_A 10 SAPQHLTVEDVTDTTTTLKWRPPDRIGAGGIDGYLVEYCLEGSEEWVPAN-K---------EPVERCGFTVKDLPTGARI 79 (111)
T ss_dssp CCCEEEEEEEECSSEEEEEEECCSCCCSSCCCEEEEEEEETTCCCCEESS-S---------SCBSSSEEEEECCCTTCCE
T ss_pred cCCCCCEEEeccCCEEEEEECCCCcCCCCcccEEEEEEEECCCCceEEcc-c---------cCCcccEEEECCCCCCCEE
Confidence 46777888777789999999976432 2245666654432222110 0 0111334678899999999
Q ss_pred EEEeCc
Q 012895 127 YYRCGG 132 (454)
Q Consensus 127 ~Yrv~~ 132 (454)
.|||..
T Consensus 80 ~frV~A 85 (111)
T 1x5y_A 80 LFRVVG 85 (111)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 999974
No 110
>2dn7_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=95.63 E-value=0.083 Score=40.95 Aligned_cols=68 Identities=18% Similarity=0.253 Sum_probs=43.2
Q ss_pred CCeeEEEEecCCCcEEEEEEeCCCCC----ccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEEE
Q 012895 53 DPQQVHISLAAKDYIRVSWITDDKEA----ESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYYY 128 (454)
Q Consensus 53 ~p~~v~l~~~~~~~~~v~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y 128 (454)
.|. +.|.....+++.|.|....... .-.|+|............ ...-....+|++|+|++.|.+
T Consensus 10 ~p~-~~v~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~-----------~~~~~~~~~i~~L~p~t~Y~~ 77 (107)
T 2dn7_A 10 RPT-MMISTTAMNTALLQWHPPKELPGELLGYRLQYCRADEARPNTID-----------FGKDDQHFTVTGLHKGTTYIF 77 (107)
T ss_dssp CCE-EEEEECSTTEEEEEEECCSSCSSCCCEEEEEEEETTCSSCEEEE-----------EETTCCEEEEECCCTTCEEEE
T ss_pred CCc-EeEEecCCCEEEEEECCCCCCCCceeEEEEEEEECCCCCCEEEE-----------eCCCccEEEeCCCCCCCEEEE
Confidence 344 6676667889999999874322 346777655433222211 111233567899999999999
Q ss_pred EeCc
Q 012895 129 RCGG 132 (454)
Q Consensus 129 rv~~ 132 (454)
||..
T Consensus 78 ~V~A 81 (107)
T 2dn7_A 78 RLAA 81 (107)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9964
No 111
>2ocf_D Fibronectin; estrogen receptor, LBD, monobody, estradiol, hormone-growth complex; HET: CME EST; 2.95A {Homo sapiens}
Probab=95.61 E-value=0.054 Score=43.71 Aligned_cols=72 Identities=17% Similarity=0.259 Sum_probs=46.9
Q ss_pred CCCCeeEEEEecCCCcEEEEEEeCCCC-CccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEEEE
Q 012895 51 ESDPQQVHISLAAKDYIRVSWITDDKE-AESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYYYR 129 (454)
Q Consensus 51 ~~~p~~v~l~~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Yr 129 (454)
...|..+.+.....+++.|.|.-.... ..-.|+|....+....... . ..+-...++|+||+|+|.|.++
T Consensus 29 ~~~P~~l~v~~~t~~Si~lsW~~p~~~i~~Y~V~y~~~~~~~~~~~~----~------v~~~~t~~~l~gL~P~t~Y~~~ 98 (121)
T 2ocf_D 29 SDVPTKLEVVAATPTSLLISWDAPAVTVRYYRITYGETGGNSPVQEF----T------VPGSKSTATISGLKPGVDYTIT 98 (121)
T ss_dssp CCSCEEEEEEEECSSCEEEEEECCSSCCCEEEEEEEETTTCSCBEEE----E------EETTCCEEEECCCCTTCEEEEE
T ss_pred CCCCCccEEEecCCCEEEEEEcCCCCCCcEEEEEEEECCCCCccEEE----E------eCCCcCEEEeCCCCCCCEEEEE
Confidence 457888888888899999999876422 2346667665432111000 0 1112346789999999999999
Q ss_pred eCc
Q 012895 130 CGG 132 (454)
Q Consensus 130 v~~ 132 (454)
|..
T Consensus 99 V~A 101 (121)
T 2ocf_D 99 VYA 101 (121)
T ss_dssp EEE
T ss_pred EEE
Confidence 864
No 112
>2ee3_A Collagen alpha-1(XX) chain; KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=95.59 E-value=0.042 Score=43.46 Aligned_cols=82 Identities=21% Similarity=0.231 Sum_probs=51.7
Q ss_pred CCCCeeEEEEecCCCcEEEEEEeCCCC-CccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEEEE
Q 012895 51 ESDPQQVHISLAAKDYIRVSWITDDKE-AESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYYYR 129 (454)
Q Consensus 51 ~~~p~~v~l~~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Yr 129 (454)
...|..+++.....+++.|+|.-.... ..-.|+|....+....... ..+-...+.|++|+|+|.|..+
T Consensus 8 ~~pP~~l~~~~vt~tsi~vsW~pp~~~i~~Y~I~y~~~~~~~~~~~~-----------v~~~~t~~~l~~L~p~T~Y~v~ 76 (108)
T 2ee3_A 8 LAPPRHLGFSDVSHDAARVFWEGAPRPVRLVRVTYVSSEGGHSGQTE-----------APGNATSAMLGPLSSSTTYTVR 76 (108)
T ss_dssp CCCSSCEEEESCCSSCEEEEESCCSSCCSEEEEEEEETTTCCBCCEE-----------EETTCCEEEECSCCSSCEEEEE
T ss_pred CCCCceEEEEEccCCeEEEEeeCCCCCccEEEEEEEeCCCCceeEEE-----------cCCCcCEEEcCCCCCCCEEEEE
Confidence 356777888777799999999765422 3447778766442211111 0111235689999999999999
Q ss_pred eCc-----c--CceeEEECCC
Q 012895 130 CGG-----R--GPEFSFKMPP 143 (454)
Q Consensus 130 v~~-----~--s~~~~F~T~p 143 (454)
|.. . .....|+|.+
T Consensus 77 V~A~~~~g~s~p~~~~~~T~~ 97 (108)
T 2ee3_A 77 VTCLYPGGGSSTLTGRVTTKK 97 (108)
T ss_dssp EEEECTTSCEEEEEEEEECCC
T ss_pred EEEEeCCCcCCCccCEEEeCC
Confidence 853 1 1234688853
No 113
>2cui_A Tenascin-X; fibronectin type III domain, extracellular matirx, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=95.53 E-value=0.032 Score=44.50 Aligned_cols=89 Identities=11% Similarity=0.132 Sum_probs=51.3
Q ss_pred CCCCeeEEEEecCCCcEEEEEEeCCCC-CccEEEEeecCCC-Cce-EEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEE
Q 012895 51 ESDPQQVHISLAAKDYIRVSWITDDKE-AESVVEYGKLPGR-YNT-VATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYY 127 (454)
Q Consensus 51 ~~~p~~v~l~~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~ 127 (454)
...|..+++.-...+++.|+|...... ..-.|+|....+. ... ...+...... .++-...++|+||+|+|.|.
T Consensus 9 pp~p~~L~v~~~T~~Si~LsW~~p~g~v~~Y~i~y~~~~~~~~e~~~~~~~~~~~~----v~~~~t~~~l~gL~PgT~Y~ 84 (112)
T 2cui_A 9 RPRLSQLSVTDVTTSSLRLNWEAPPGAFDSFLLRFGVPSPSTLEPHPRPLLQRELM----VPGTRHSAVLRDLRSGTLYS 84 (112)
T ss_dssp CCCCCCCEEESCCSSCEEEECCCCTTSCSEEEEEEECCCCSSSCCCSSCCCCEEEE----EETTCCEEEECSCCTTCEEE
T ss_pred CCCCCceEEEeecCCeEEEEECCCCCCccEEEEEEEeCCCCccccccccCcceEEE----cCCCcCEEEeCCCCCCCEEE
Confidence 345667778877799999999876422 3457788755331 000 0000000000 11223467899999999999
Q ss_pred EEeCcc-------CceeEEECCC
Q 012895 128 YRCGGR-------GPEFSFKMPP 143 (454)
Q Consensus 128 Yrv~~~-------s~~~~F~T~p 143 (454)
++|... ......+|.+
T Consensus 85 ~~V~A~~~~~~s~p~~~~~~T~~ 107 (112)
T 2cui_A 85 LTLYGLRGPHKADSIQGTARTLS 107 (112)
T ss_dssp EEEEEECSSSEEEEEEEEEECCC
T ss_pred EEEEEEECCcccCCEEEEEEECC
Confidence 998531 2334566654
No 114
>3t04_D Monobody 7C12; engineered binding protein, antibody mimic, protein-protein SH2 domain, ATP-binding, phosphoprotein; 2.10A {Homo sapiens}
Probab=95.48 E-value=0.029 Score=43.83 Aligned_cols=71 Identities=18% Similarity=0.289 Sum_probs=45.2
Q ss_pred CCCeeEEEEecCCCcEEEEEEeCCCC----CccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEE
Q 012895 52 SDPQQVHISLAAKDYIRVSWITDDKE----AESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYY 127 (454)
Q Consensus 52 ~~p~~v~l~~~~~~~~~v~W~t~~~~----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~ 127 (454)
..|..+++.....+++.|+|.....+ ..-.|+|........... .. ..+-...++|+||+|+|.|.
T Consensus 9 ~~P~~l~v~~~t~~Sv~lsW~~p~~~~g~i~~Y~v~y~~~~~~~~~~~------~~----v~~~~ts~~l~~L~p~t~Y~ 78 (103)
T 3t04_D 9 SVPTKLEVVDATPTSLKISWDAYYSSWQNVKYYRITYGETGGDSPVQE------FT----VPGYYSTATISGLKPGVDYT 78 (103)
T ss_dssp CCCCSCEEEEEETTEEEEECTTTTTTSCCCCEEEEEEEETTCSSCCEE------EE----EETTCCEEEECSCCTTCCEE
T ss_pred CCCceeEEEecCCCEEEEEccCCCCCCCccceEEEEEEECCCCCccEE------EE----cCCCcCEEEeCCCCCCCEEE
Confidence 35667777777799999999876521 223677876532111110 00 11123467899999999999
Q ss_pred EEeCc
Q 012895 128 YRCGG 132 (454)
Q Consensus 128 Yrv~~ 132 (454)
++|..
T Consensus 79 ~~V~A 83 (103)
T 3t04_D 79 ITVYA 83 (103)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99864
No 115
>2crm_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=95.41 E-value=0.026 Score=45.16 Aligned_cols=79 Identities=15% Similarity=0.188 Sum_probs=46.4
Q ss_pred CCeeEEEE-ecCCCcEEEEEEeCCCC-----CccEEEEeecCCC-CceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCE
Q 012895 53 DPQQVHIS-LAAKDYIRVSWITDDKE-----AESVVEYGKLPGR-YNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATT 125 (454)
Q Consensus 53 ~p~~v~l~-~~~~~~~~v~W~t~~~~-----~~~~v~y~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~ 125 (454)
.|..+.+. ....+++.|.|...... ..-.|+|...... .+.... .+-.....|++|+|++.
T Consensus 20 ~P~~~~~~~~~~~~sv~l~W~~p~~~gg~~i~~Y~v~~~~~~~~~~~~~~~------------~~~~~~~~v~~L~p~t~ 87 (120)
T 2crm_A 20 IPVKPSVKGKIHSHSFKITWDPPKDNGGATINKYVVEMAEGSNGNKWEMIY------------SGATREHLCDRLNPGCF 87 (120)
T ss_dssp CCCCCEEEEEEETTEEEEECCCCTTCCSSCCCEEEEEEEESSSSCCCEEEE------------CSSCSEEEECSCCTTSC
T ss_pred CCCCCEEeeccCCCEEEEEECCCCcCCCCeeeEEEEEEccCCCCcCCEEEE------------eccccEEEECCCCCCCE
Confidence 44444455 34478999999876432 2345666654331 121111 11133467899999999
Q ss_pred EEEEeCc--------cCceeEEECCC
Q 012895 126 YYYRCGG--------RGPEFSFKMPP 143 (454)
Q Consensus 126 Y~Yrv~~--------~s~~~~F~T~p 143 (454)
|.|||.. .+....++|++
T Consensus 88 Y~frV~A~n~~G~s~~S~~~~~~T~~ 113 (120)
T 2crm_A 88 YRLRVYCISDGGQSAVSESLLVQTPA 113 (120)
T ss_dssp EEEEEEEEETTEECCCCCCCCCCCCC
T ss_pred EEEEEEEEcCCccCCCcccEEEEcCC
Confidence 9999964 24455666644
No 116
>3f7q_A Integrin beta-4, GP150; hemidesmosome, cell adhesion, carcinoma, epidermolysis bullosa, alternative splicing, disease mutation, glycoprotein; HET: 1PE PG4; 1.75A {Homo sapiens} PDB: 3f7r_A 3f7p_C 1qg3_A
Probab=95.35 E-value=0.13 Score=46.10 Aligned_cols=82 Identities=16% Similarity=0.168 Sum_probs=53.6
Q ss_pred CCCCeeEEEEecCCCcEEEEEEeCCC-CCccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEEEE
Q 012895 51 ESDPQQVHISLAAKDYIRVSWITDDK-EAESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYYYR 129 (454)
Q Consensus 51 ~~~p~~v~l~~~~~~~~~v~W~t~~~-~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Yr 129 (454)
...|..+.+.....+++.|+|.-... ...-.|+|.............. .....+.|++|+|+|.|.++
T Consensus 6 ~~~P~~l~~~~~~~~si~l~W~~p~g~i~~Y~v~~~~~~~~~~~~~~~~-----------~~~~~~~i~~L~p~t~Y~~~ 74 (234)
T 3f7q_A 6 LGAPQNPNAKAAGSRKIHFNWLPPSGKPMGYRVKYWIQGDSESEAHLLD-----------SKVPSVELTNLYPYCDYEMK 74 (234)
T ss_dssp CCCCEEEEEEECSSSCEEEEEECCSSCCCEEEEEEEETTSCGGGCEEEE-----------ESSSEEEECSCCTTCEEEEE
T ss_pred CCCCcceEEEEcCCCEEEEEEECCCCccceEEEEEEECCCCccceEEEc-----------CCccEEEECCCCCCCEEEEE
Confidence 45788888888889999999998742 2334677776543222111100 11234678999999999999
Q ss_pred eCc--------cCceeEEECCC
Q 012895 130 CGG--------RGPEFSFKMPP 143 (454)
Q Consensus 130 v~~--------~s~~~~F~T~p 143 (454)
|.. .+....|+|++
T Consensus 75 V~A~n~~G~g~~s~~~~~~T~~ 96 (234)
T 3f7q_A 75 VCAYGAQGEGPYSSLVSCRTHQ 96 (234)
T ss_dssp EEEEETTEECCCCCCEEEECCC
T ss_pred EEEEeCCCcCCCCCeEEEEcCC
Confidence 853 24566788854
No 117
>3qht_C Monobody YSMB-1; fibronectin type III, yeast small ubiquitin-like modifier, S NOVO protein; 2.40A {Artificial gene}
Probab=95.34 E-value=0.033 Score=42.86 Aligned_cols=70 Identities=20% Similarity=0.294 Sum_probs=45.0
Q ss_pred CCCeeEEEEecCCCcEEEEEEeCCCC-CccEEEEeecCCCC-ceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEEEE
Q 012895 52 SDPQQVHISLAAKDYIRVSWITDDKE-AESVVEYGKLPGRY-NTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYYYR 129 (454)
Q Consensus 52 ~~p~~v~l~~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Yr 129 (454)
..|..+++.....+++.|+|...... ..-.|+|....+.. ..... ..+-...+.|+||+|+|.|.++
T Consensus 6 ~~P~~l~v~~~t~~Si~lsW~~p~~~i~~Y~v~y~~~~~~~~~~~~~-----------v~~~~t~~~l~~L~p~t~Y~v~ 74 (97)
T 3qht_C 6 SVPTKLEVVAATPTSLLISWDASSSSVSYYRITYGETGGNSPVQEFT-----------VPGSSSTATISGLSPGVDYTIT 74 (97)
T ss_dssp CSSSSCEEEEEETTEEEEECCCCCSSCCEEEEEEEESSSCSCCEEEE-----------EETTCCEEEECSCCTTCEEEEE
T ss_pred CCCCceEEEecCCCEEEEEEeCCCCCCCEEEEEEEECCCCCccEEEE-----------eCCCcCEEEeCCCCCCCEEEEE
Confidence 35666777777789999999876322 23467777654321 11110 1122345789999999999999
Q ss_pred eCc
Q 012895 130 CGG 132 (454)
Q Consensus 130 v~~ 132 (454)
|..
T Consensus 75 V~A 77 (97)
T 3qht_C 75 VYA 77 (97)
T ss_dssp EEE
T ss_pred EEE
Confidence 864
No 118
>1ujt_A KIAA1568 protein; fibronectin type III domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=95.32 E-value=0.073 Score=42.96 Aligned_cols=79 Identities=14% Similarity=0.168 Sum_probs=47.5
Q ss_pred eEEEEec---CCCcEEEEEEeCCCCC---ccEEEEeecCC---CCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEE
Q 012895 56 QVHISLA---AKDYIRVSWITDDKEA---ESVVEYGKLPG---RYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTY 126 (454)
Q Consensus 56 ~v~l~~~---~~~~~~v~W~t~~~~~---~~~v~y~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y 126 (454)
+|++... ..+++.|+|.-....+ .-.|.|..... ....... . ...+-...+.|+||+|+|.|
T Consensus 18 ~v~l~~~~a~sstsi~vsW~~~~~~g~i~gY~V~Y~~~~~~~~~~~~~~~-~--------v~~~~~~~~~l~~L~p~T~Y 88 (120)
T 1ujt_A 18 LVRLHNPVVLTPTTVQVTWTVDRQPQFIQGYRVMYRQTSGLQATSSWQNL-D--------AKVPTERSAVLVNLKKGVTY 88 (120)
T ss_dssp CEEECCCCCCBTTEEEEEEEESSCCSSCCEEEEEEEESSSSSTTTCCEEE-E--------CCCTTCCEEEEESCCSSEEE
T ss_pred EEEeeccEEccCceEEEEEccCCCCCcEeeEEEEEEECCCCCCCCccEEE-E--------ecCCCcCEEEECCCCCCCEE
Confidence 4455433 3789999999642221 23677876643 1111100 0 01222456789999999999
Q ss_pred EEEeCc--------cCceeEEECCC
Q 012895 127 YYRCGG--------RGPEFSFKMPP 143 (454)
Q Consensus 127 ~Yrv~~--------~s~~~~F~T~p 143 (454)
.++|.. .|....|+|+.
T Consensus 89 ~~~V~A~n~~G~Gp~S~~v~~~T~e 113 (120)
T 1ujt_A 89 EIKVRPYFNEFQGMDSESKTVRTTE 113 (120)
T ss_dssp EEEEEEESSSCCCCCCCCEEEEECS
T ss_pred EEEEEEECCCccCCCCCCEEEECCC
Confidence 999853 35667788865
No 119
>2yux_A Myosin-binding protein C, SLOW-type; fibronectin III domain, structural genomics., NPPSFA; NMR {Homo sapiens}
Probab=95.32 E-value=0.057 Score=43.19 Aligned_cols=70 Identities=14% Similarity=0.175 Sum_probs=45.5
Q ss_pred CCCeeEEEEecCCCcEEEEEEeCCCC-----CccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEE
Q 012895 52 SDPQQVHISLAAKDYIRVSWITDDKE-----AESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTY 126 (454)
Q Consensus 52 ~~p~~v~l~~~~~~~~~v~W~t~~~~-----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y 126 (454)
..|..+.+.....+++.|.|..+... ..-.|+|.......+..... ..-...+.|++|+|++.|
T Consensus 19 ~~P~~l~~~~~~~~sv~l~W~~p~~~gg~~i~~Y~v~~~~~~~~~w~~~~~-----------~~~~~~~~v~~L~p~t~Y 87 (120)
T 2yux_A 19 GPPQIVKIEDVWGENVALTWTPPKDDGNAAITGYTIQKADKKSMEWFTVIE-----------HYHRTSATITELVIGNEY 87 (120)
T ss_dssp CCCSCEEEEEEETTEEEEEECCCSCCCSSCCCCCCEEEEETTTCCCEEEES-----------SCCSSCCEECCCCSSEEE
T ss_pred CcCCCCEEEEecCCEEEEEEcCCCcCCCCCceEEEEEEEECCCCceEEeee-----------cCCcCEEEECCCCCCCEE
Confidence 46777777766788999999876422 22467777654333322211 111234578999999999
Q ss_pred EEEeCc
Q 012895 127 YYRCGG 132 (454)
Q Consensus 127 ~Yrv~~ 132 (454)
.|||..
T Consensus 88 ~frV~A 93 (120)
T 2yux_A 88 YFRVFS 93 (120)
T ss_dssp EEEECC
T ss_pred EEEEEE
Confidence 999975
No 120
>2db8_A Tripartite motif protein 9, isoform 2; ring finger protein 91, TRIM9, KIAA0282, RNF91, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=95.18 E-value=0.016 Score=45.81 Aligned_cols=70 Identities=14% Similarity=0.138 Sum_probs=43.1
Q ss_pred CCCcEEEEEEeCCCC----CccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEEEEeCc------
Q 012895 63 AKDYIRVSWITDDKE----AESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYYYRCGG------ 132 (454)
Q Consensus 63 ~~~~~~v~W~t~~~~----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Yrv~~------ 132 (454)
..+++.|.|...... ..-.|+|.......+..... +.....+|++|+|++.|.|||..
T Consensus 23 ~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~------------~~~~~~~v~~L~p~t~Y~frV~A~n~~G~ 90 (110)
T 2db8_A 23 HNNSATLSWKQPPLSTVPADGYILELDDGNGGQFREVYV------------GKETMCTVDGLHFNSTYNARVKAFNKTGV 90 (110)
T ss_dssp SSSEEEECCBCCTTCCSCCSEEEEEECCSSSSCCEEEEE------------ESCSCEEEECCCSSSCCEEEEEEECSSCB
T ss_pred CCCEEEEEECCCCCCCCCccEEEEEEEeCCCCceEEEEe------------CCcCEEEECCCCCCCEEEEEEEEEeCCcC
Confidence 368899999877532 23456776543222221110 01123568899999999999863
Q ss_pred --cCceeEEECCCC
Q 012895 133 --RGPEFSFKMPPA 144 (454)
Q Consensus 133 --~s~~~~F~T~p~ 144 (454)
.++...|+|++.
T Consensus 91 s~~S~~~~~~T~~~ 104 (110)
T 2db8_A 91 SPYSKTLVLQTSEG 104 (110)
T ss_dssp CCCCSCEECCCCCC
T ss_pred CCCCCCEEEEcCCC
Confidence 356677888664
No 121
>1bpv_A Titin, A71, connectin; fibronectin type III; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=95.17 E-value=0.028 Score=44.79 Aligned_cols=70 Identities=14% Similarity=0.144 Sum_probs=42.3
Q ss_pred CCeeEEEEecCCCcEEEEEEeCCC-----CCccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEE
Q 012895 53 DPQQVHISLAAKDYIRVSWITDDK-----EAESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYY 127 (454)
Q Consensus 53 ~p~~v~l~~~~~~~~~v~W~t~~~-----~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~ 127 (454)
.|..+.+.....+++.|.|..... ...-.|+|...+...+..+... ......++|+||+|++.|.
T Consensus 13 ~P~~P~v~~v~~~sv~L~W~~P~~~gg~~i~~Y~Ve~~~~~~~~w~~~~~~----------~~~~~~~~v~~L~p~t~Y~ 82 (112)
T 1bpv_A 13 PPGKPVPLNITRHTVTLKWAKPEYTGGFKITSYIVEKRDLPNGRWLKANFS----------NILENEFTVSGLTEDAAYE 82 (112)
T ss_dssp CCCCCEEEEEETTEEEEECCCCSCCTTCCCSCCEEEEEETTSCCCEECCCS----------CCCSSEEEECSCCSSCCEE
T ss_pred CCCCCEEEEeeCCEEEEEECCCCcCCCCcccEEEEEEEECCCCceEEeecc----------cCccCEEEECCCCCCCEEE
Confidence 344444555568899999985421 1345788876543323221100 1112245789999999999
Q ss_pred EEeCc
Q 012895 128 YRCGG 132 (454)
Q Consensus 128 Yrv~~ 132 (454)
|||..
T Consensus 83 frV~A 87 (112)
T 1bpv_A 83 FRVIA 87 (112)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99964
No 122
>1qr4_A Protein (tenascin); fibronectin type-III, heparin, extracellular matrix, adhesion, fusion protein, structural protein; 2.55A {Gallus gallus} SCOP: b.1.2.1 b.1.2.1
Probab=95.17 E-value=0.13 Score=44.10 Aligned_cols=87 Identities=11% Similarity=0.157 Sum_probs=53.9
Q ss_pred CCCeeEEEEecCCCcEEEEEEeCCCC-CccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEEEEe
Q 012895 52 SDPQQVHISLAAKDYIRVSWITDDKE-AESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYYYRC 130 (454)
Q Consensus 52 ~~p~~v~l~~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Yrv 130 (454)
..|..+++.....+++.|.|.-.... ..-.|+|....+. .... . ...-...+.|++|+|++.|.|+|
T Consensus 8 ~~P~~l~~~~~~~~sv~l~W~~p~~~i~~Y~v~~~~~~~~-~~~~-------~----~~~~~~~~~i~~L~p~t~Y~~~V 75 (186)
T 1qr4_A 8 DNPKDLEVSDPTETTLSLRWRRPVAKFDRYRLTYVSPSGK-KNEM-------E----IPVDSTSFILRGLDAGTEYTISL 75 (186)
T ss_dssp CCCEEEEEESCCSSEEEEEEECCSSCCSEEEEEEECTTCC-EEEE-------E----ECTTCSEEEEESCCSSCEEEEEE
T ss_pred cCCCceEEEecCCCEEEEEEeCCCCCccEEEEEEEeCCCC-eeEE-------E----CCCCCCEEEECCCCCCCEEEEEE
Confidence 46778888877789999999976432 3456777643221 1110 0 11122345789999999999999
Q ss_pred Cc-------cCceeEEECCCC-CCCeEE
Q 012895 131 GG-------RGPEFSFKMPPA-NFPIEF 150 (454)
Q Consensus 131 ~~-------~s~~~~F~T~p~-~~~~~f 150 (454)
.. ......++|+|. ...+++
T Consensus 76 ~a~~~~~~s~~~~~~~~t~p~~P~~l~~ 103 (186)
T 1qr4_A 76 VAEKGRHKSKPTTIKGSTVVGSPKGISF 103 (186)
T ss_dssp EEESSSCBCCCEEEEEECCCCCCSCEEE
T ss_pred EEEcCCccCCCEEEEEECCCCCCCccEE
Confidence 63 123466778764 334444
No 123
>1wis_A KIAA1514 protein; FNIII domain, sidekick-2, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=95.15 E-value=0.074 Score=42.82 Aligned_cols=73 Identities=15% Similarity=0.148 Sum_probs=45.0
Q ss_pred CCCeeEEEEecCCCcEEEEEEeCCCCC----ccEEEEeec---CCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCC
Q 012895 52 SDPQQVHISLAAKDYIRVSWITDDKEA----ESVVEYGKL---PGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPAT 124 (454)
Q Consensus 52 ~~p~~v~l~~~~~~~~~v~W~t~~~~~----~~~v~y~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t 124 (454)
..|..+.+.....+++.|.|.-..... .-.|+|... ....+...... . .......++|.+|+|++
T Consensus 19 ~~P~~l~~~~~~~~sv~l~W~p~~~~~~~i~~Y~v~~~~~~~~~~~~w~~~~~~----~----~~~~~~~~~v~~L~p~t 90 (124)
T 1wis_A 19 GPPTNLGISNIGPRSVTLQFRPGYDGKTSISRWLVEAQVGVVGEGEEWLLIHQL----S----NEPDARSMEVPDLNPFT 90 (124)
T ss_dssp CCCEEEEEESCCSSCEEEEEECCCCCSSCCSEEEEEECBSCCSTTSCCEEEEEE----E----SCTTCSEEEECSCCTTS
T ss_pred ccCCCCEEEEecCCEEEEEEECCCCCCCcccEEEEEEEECCCCCCCCCeEeeeE----c----cCCCceEEEeCCCCCCC
Confidence 467778887767899999996553222 346777652 22222221100 0 11223457889999999
Q ss_pred EEEEEeCc
Q 012895 125 TYYYRCGG 132 (454)
Q Consensus 125 ~Y~Yrv~~ 132 (454)
.|.|||..
T Consensus 91 ~Y~frV~A 98 (124)
T 1wis_A 91 CYSFRMRQ 98 (124)
T ss_dssp EECCCCEE
T ss_pred EEEEEEEE
Confidence 99999863
No 124
>1tdq_A Tenascin-R; extracellular matrix, lecticans, tenascins, protein-protein interactions, C-type lectin domain; 2.60A {Rattus norvegicus} SCOP: b.1.2.1 b.1.2.1 b.1.2.1
Probab=95.06 E-value=0.36 Score=44.31 Aligned_cols=96 Identities=13% Similarity=0.156 Sum_probs=57.6
Q ss_pred CCCCeeEEEEecCCCcEEEEEEeCCC-CCccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEEEE
Q 012895 51 ESDPQQVHISLAAKDYIRVSWITDDK-EAESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYYYR 129 (454)
Q Consensus 51 ~~~p~~v~l~~~~~~~~~v~W~t~~~-~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Yr 129 (454)
...|..+.+.....+++.|.|..... ...-.|+|....+.......-. ...+-...+.|++|+|++.|.++
T Consensus 105 p~~P~~l~~~~~~~~sv~l~W~~p~~~i~~Y~v~~~~~~~~~~~~~~~~--------~~~~~~~~~~i~~L~p~t~Y~~~ 176 (283)
T 1tdq_A 105 IDAPKNLRVGSRTATSLDLEWDNSEAEAQEYKVVYSTLAGEQYHEVLVP--------KGIGPTTKTTLTDLVPGTEYGVG 176 (283)
T ss_dssp CCCCEEEEEEEECSSCEEEEEECCSSCCSEEEEEEEETTCCCCEEEEEE--------CCSSSEEEEEECSCCTTCEEEEE
T ss_pred CCCCCceEEEecCCCeEEEEecCCCCCccEEEEEEEeCCCCcceEEECC--------CCCcccceEEEecCCCCCEEEEE
Confidence 45678888877778999999998742 2345677766543222111100 01111566789999999999999
Q ss_pred eCc-------cCceeEEECCCC-CCCeEEEEEe
Q 012895 130 CGG-------RGPEFSFKMPPA-NFPIEFAIVG 154 (454)
Q Consensus 130 v~~-------~s~~~~F~T~p~-~~~~~f~~ig 154 (454)
|.. ......+.|.|. ...+++..++
T Consensus 177 V~A~n~~g~s~~~~~~~~t~~~~P~~l~~~~~~ 209 (283)
T 1tdq_A 177 ISAVMNSKQSIPATMNARTELDSPRDLMVTASS 209 (283)
T ss_dssp EEEEETTEECCCEEEEEECCCCCCEEEEEEEEC
T ss_pred EEEEeCCCCCcceEEEecCCCCCCCccEEeEec
Confidence 964 123345666553 2334444433
No 125
>2yrz_A Integrin beta-4; GP150, CD104 antigen, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=94.98 E-value=0.045 Score=43.46 Aligned_cols=71 Identities=24% Similarity=0.306 Sum_probs=43.4
Q ss_pred CCCeeEEEEecCCCcEEEEEEeCCCCC---ccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEEE
Q 012895 52 SDPQQVHISLAAKDYIRVSWITDDKEA---ESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYYY 128 (454)
Q Consensus 52 ~~p~~v~l~~~~~~~~~v~W~t~~~~~---~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y 128 (454)
..|..+++.....+++.|.|......+ .-.|+|.......+.... ....-...+.|++|+|++.|.+
T Consensus 19 ~~P~~l~~~~~~~~sv~l~W~~p~~~g~i~~Y~v~~~~~~~~~~~~~~----------~~~~~~~~~~i~~L~p~t~Y~~ 88 (118)
T 2yrz_A 19 DTPTRLVFSALGPTSLRVSWQEPRCERPLQGYSVEYQLLNGGELHRLN----------IPNPAQTSVVVEDLLPNHSYVF 88 (118)
T ss_dssp CCCCCCEECCCBTTEEEEECCCCCCSSCEEEEEEEEEBSSSCCEEEEE----------ESCTTCCEEEEESCCTTCEEEE
T ss_pred CCCCceEEEeCCCCEEEEEeCCCCCCCCccEEEEEEEECCCCceEEEE----------cCCCCcCEEEeCCCCCCCEEEE
Confidence 356666666666899999998775432 234555543332111110 0112234567899999999999
Q ss_pred EeCc
Q 012895 129 RCGG 132 (454)
Q Consensus 129 rv~~ 132 (454)
||..
T Consensus 89 ~V~A 92 (118)
T 2yrz_A 89 RVRA 92 (118)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9964
No 126
>1wfu_A Unnamed protein product; FN3 domain, similar to 1700007B22RIK protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.1.2.1
Probab=94.97 E-value=0.041 Score=44.52 Aligned_cols=31 Identities=26% Similarity=0.301 Sum_probs=24.5
Q ss_pred EEEECCCCCCCEEEEEeCc--------cCceeEEECCCC
Q 012895 114 HVKIGPLEPATTYYYRCGG--------RGPEFSFKMPPA 144 (454)
Q Consensus 114 ~~~l~gL~p~t~Y~Yrv~~--------~s~~~~F~T~p~ 144 (454)
.++|++|+|+|.|.|||.. .+....++|.++
T Consensus 76 ~~~v~gL~p~t~Y~frV~A~n~~G~s~~S~~~~~~T~~~ 114 (120)
T 1wfu_A 76 RHVVEGLEPRTLYKFRLKVTSPSGEYEYSPVVSVATTRE 114 (120)
T ss_dssp EEEEESCCTTCEEEEEEEEECSSSCEEECCCEEEECCCC
T ss_pred EEEECCCCCCCEEEEEEEEECCCCCCCCCccEeeEcCCC
Confidence 3678999999999999964 256677888764
No 127
>1tdq_A Tenascin-R; extracellular matrix, lecticans, tenascins, protein-protein interactions, C-type lectin domain; 2.60A {Rattus norvegicus} SCOP: b.1.2.1 b.1.2.1 b.1.2.1
Probab=94.96 E-value=0.21 Score=45.90 Aligned_cols=94 Identities=13% Similarity=0.222 Sum_probs=57.6
Q ss_pred CCCeeEEEEecCCCcEEEEEEeCC-CCCccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEEEEe
Q 012895 52 SDPQQVHISLAAKDYIRVSWITDD-KEAESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYYYRC 130 (454)
Q Consensus 52 ~~p~~v~l~~~~~~~~~v~W~t~~-~~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Yrv 130 (454)
..|..+.+.....+++.|.|.-.. ....-.|+|.......... ... ...-...+.|++|+|++.|.++|
T Consensus 16 ~~P~~l~~~~~~~~sv~l~W~~~~~~~~~Y~v~~~~~~~~~~~~------~~~----~~~~~~~~~i~~L~p~t~Y~~~V 85 (283)
T 1tdq_A 16 DGPTQILVRDVSDTVAFVEWTPPRAKVDFILLKYGLVGGEGGKT------TFR----LQPPLSQYSVQALRPGSRYEVSI 85 (283)
T ss_dssp CCCEEEEEEEECSSCEEEEEECCSSCCSEEEEEEEESSSSCCCE------EEE----ECTTCSEEEECSCCTTCEEEEEE
T ss_pred CCCcEEEEEecCCCeEEEEEECCCCceeEEEEEEEEecCCCCcE------EEE----eCCCCCEEEecCCCCCCEEEEEE
Confidence 467788888777899999999875 2234567775433211110 000 11223456789999999999999
Q ss_pred Cc-------cCceeEEECCCC-CCCeEEEEEec
Q 012895 131 GG-------RGPEFSFKMPPA-NFPIEFAIVGD 155 (454)
Q Consensus 131 ~~-------~s~~~~F~T~p~-~~~~~f~~igD 155 (454)
.. ......|.|+|. ...+++..+++
T Consensus 86 ~a~~~~g~s~~~~~~~~t~p~~P~~l~~~~~~~ 118 (283)
T 1tdq_A 86 SAVRGTNESDASSTQFTTEIDAPKNLRVGSRTA 118 (283)
T ss_dssp EEEETTEECCCEEEEEECCCCCCEEEEEEEECS
T ss_pred EEECCCCCCCCeeEEEECCCCCCCceEEEecCC
Confidence 64 123456888774 33344444443
No 128
>2qbw_A PDZ-fibronectin fusion protein; fibronectin PDZ, unknown function; 1.80A {Homo sapiens} PDB: 3ch8_A
Probab=94.96 E-value=0.056 Score=47.52 Aligned_cols=72 Identities=17% Similarity=0.212 Sum_probs=45.8
Q ss_pred CCCCeeEEEEecCCCcEEEEEEeCCCC-CccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEEEE
Q 012895 51 ESDPQQVHISLAAKDYIRVSWITDDKE-AESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYYYR 129 (454)
Q Consensus 51 ~~~p~~v~l~~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Yr 129 (454)
...|..+++.....+++.|+|..+... ..-.|.|............ . .++-...++|+||+|+|.|.++
T Consensus 104 ~~~P~~l~v~~~t~~si~l~W~~p~~~i~~Y~v~y~~~~~~~~~~~~----~------v~~~~t~~~l~gL~p~t~Y~~~ 173 (195)
T 2qbw_A 104 SSVPTNLEVVAATPTSLLISWDASYYGVSYYRITYGETGGNSPVQEF----T------VPYSSSTATISGLKPGVDYTIT 173 (195)
T ss_dssp CCSSCCCEEEEEETTEEEEECCCCCSSCSEEEEEEEETTCCSCCEEE----E------EETTCSEEEECSCCTTCEEEEE
T ss_pred CCCCcccEEEeCCCCEEEEEEeCCCCCccEEEEEEEECCCCCcceEE----E------eCCCCCEEEeCCCCCCCEEEEE
Confidence 356777888777799999999766422 2346777655432111100 0 1112345789999999999999
Q ss_pred eCc
Q 012895 130 CGG 132 (454)
Q Consensus 130 v~~ 132 (454)
|..
T Consensus 174 V~A 176 (195)
T 2qbw_A 174 VYA 176 (195)
T ss_dssp EEE
T ss_pred EEE
Confidence 863
No 129
>1v5j_A KIAA1355 protein, RSGI RUH-008; FN3 domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, cell adhesion; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=94.93 E-value=0.13 Score=40.60 Aligned_cols=81 Identities=12% Similarity=0.056 Sum_probs=50.1
Q ss_pred CCCeeEEEEecCCCcEEEEEEeCCCC----CccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEE
Q 012895 52 SDPQQVHISLAAKDYIRVSWITDDKE----AESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYY 127 (454)
Q Consensus 52 ~~p~~v~l~~~~~~~~~v~W~t~~~~----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~ 127 (454)
..|..+.+.. ..+++.+.|.-+... ..-.|+|... +..+...... ...-..+..|.+|+|++.|.
T Consensus 9 ~pP~~l~v~~-~~~sv~L~W~pP~~~~~~I~gY~vey~~~-~~~W~~~~~~---------~~~~~t~~~v~~L~pg~~Y~ 77 (108)
T 1v5j_A 9 SPPRGLVAVR-TPRGVLLHWDPPELVPKRLDGYVLEGRQG-SQGWEVLDPA---------VAGTETELLVPGLIKDVLYE 77 (108)
T ss_dssp CCCEEEEEEE-CSSSEEEEEECCSCCSSCCCBEEEEEEET-TCCCEEEEEE---------ECSSCCEEECCCCCTTSCEE
T ss_pred CCCcceEEEE-eCCEEEEEECCCCCCCCCCcEEEEEEEeC-CCCcEEeeee---------cCCCcCEEEeCCCCCCCEEE
Confidence 5677777765 367899999988642 2346788773 2223322211 11223456689999999999
Q ss_pred EEeCc--------cCceeEEECCC
Q 012895 128 YRCGG--------RGPEFSFKMPP 143 (454)
Q Consensus 128 Yrv~~--------~s~~~~F~T~p 143 (454)
+||.. .|+...++|..
T Consensus 78 FRV~A~n~~G~s~pS~~~~v~T~~ 101 (108)
T 1v5j_A 78 FRLVAFAGSFVSDPSNTANVSTSG 101 (108)
T ss_dssp CCBEEEETTEEEEECSCCCCCCSS
T ss_pred EEEEEEcCCCCcCCCCCEEEEeCC
Confidence 99964 24455555543
No 130
>3r8q_A Fibronectin; heparin, FNIII, heparin binding, cell adhesion; 2.40A {Homo sapiens} PDB: 1fnh_A
Probab=94.93 E-value=0.25 Score=45.69 Aligned_cols=93 Identities=17% Similarity=0.155 Sum_probs=57.9
Q ss_pred CCCeeEEEEecCCCcEEEEEEeCCC-CCccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEEEEe
Q 012895 52 SDPQQVHISLAAKDYIRVSWITDDK-EAESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYYYRC 130 (454)
Q Consensus 52 ~~p~~v~l~~~~~~~~~v~W~t~~~-~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Yrv 130 (454)
..|..+.+...+.+++.|.|..... ...-.|+|....+....... ...-...+.|++|+|++.|.++|
T Consensus 114 ~~P~~l~~~~~~~~sv~l~W~~p~~~~~~Y~v~~~~~~~~~~~~~~-----------~~~~~~~~~i~~L~p~t~Y~~~V 182 (290)
T 3r8q_A 114 SPPRRARVTDATETTITISWRTKTETITGFQVDAVPANGQTPIQRT-----------IKPDVRSYTITGLQPGTDYKIYL 182 (290)
T ss_dssp CCCEEEEEEEECSSCEEEEEECCSCCCCEEEEEEEESSSCCCEEEE-----------ECTTCSEEEECSCCTTCEEEEEE
T ss_pred CCCceeEEEEcCCCeEEEEEeCCCCcccEEEEEEEECCCCcceEEe-----------cCCCccEEEECCCCCCCEEEEEE
Confidence 5788888887778999999998753 23456667655432211111 11123346789999999999999
Q ss_pred Cc-------cCceeEEECCCC-CCCeEEEEEec
Q 012895 131 GG-------RGPEFSFKMPPA-NFPIEFAIVGD 155 (454)
Q Consensus 131 ~~-------~s~~~~F~T~p~-~~~~~f~~igD 155 (454)
.. ......+.|+|. ...+++..+++
T Consensus 183 ~A~n~~g~s~~~~~~~~t~p~~P~~l~~~~~~~ 215 (290)
T 3r8q_A 183 YTLNDNARSSPVVIDASTAIDAPSNLRFLATTP 215 (290)
T ss_dssp EEEETTEECCCEEEEEECCCCCCEEEEEEEEET
T ss_pred EEEeCCcccCCEEEEecCCCCCCCccEEEeeCC
Confidence 63 123455677664 33455544443
No 131
>2ibg_A CG9211-PA, GH03927P; IHOG, fibronectin type III, protein binding; 2.20A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 PDB: 2ibb_A
Probab=94.90 E-value=0.094 Score=46.17 Aligned_cols=80 Identities=18% Similarity=0.159 Sum_probs=48.5
Q ss_pred CCeeEEEEecCCCcEEEEEEeCC--C---CCccEEEEeecCCC-CceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEE
Q 012895 53 DPQQVHISLAAKDYIRVSWITDD--K---EAESVVEYGKLPGR-YNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTY 126 (454)
Q Consensus 53 ~p~~v~l~~~~~~~~~v~W~t~~--~---~~~~~v~y~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y 126 (454)
.|..+.+.....+++.|.|.... . ...-.|+|...... ......- ...-....+|++|+|++.|
T Consensus 118 ~P~~~~~~~~~~~sv~l~W~~p~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~----------~~~~~~~~~i~~L~p~t~Y 187 (214)
T 2ibg_A 118 VPELLEIEEYSETAVVLHWSLASDADEHLITGYYAYYRPSSSAGEYFKATI----------EGAHARSFKIAPLETATMY 187 (214)
T ss_dssp CCEECCCBCCSSSCEEEEEECCTTCCGGGCCEEEEEEEETTCCSCCEEEEE----------ECTTCCEEEECSCCTTCEE
T ss_pred CCcccEEEEccCCeEEEEEeCCCccCCCCcceEEEEEEECCCCcceEEeec----------cCCcceEEEeCCCCCCCEE
Confidence 46666655556889999999873 1 12345667655431 1111110 1111234578999999999
Q ss_pred EEEeCc--------cCceeEEECC
Q 012895 127 YYRCGG--------RGPEFSFKMP 142 (454)
Q Consensus 127 ~Yrv~~--------~s~~~~F~T~ 142 (454)
.|||.. .+....++|.
T Consensus 188 ~~~V~A~n~~G~g~~S~~~~~~T~ 211 (214)
T 2ibg_A 188 EFKLQSFSAASASEFSALKQGRTQ 211 (214)
T ss_dssp EEEEEEECSSCBCCCCCCEEEECC
T ss_pred EEEEEEEcCCccCCCcceEeeEec
Confidence 999963 2456677774
No 132
>1uey_A KIAA0343 protein; immunoglobulin-like beta-sandwich fold, NG-CAM related cell adhesion molecule, fibronectin type III domain, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=94.86 E-value=0.25 Score=39.61 Aligned_cols=83 Identities=13% Similarity=0.191 Sum_probs=47.9
Q ss_pred CCCCeeEEEEecCCCcEEEEEEeCCCCCc----cEEEEeecCCC-CceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCE
Q 012895 51 ESDPQQVHISLAAKDYIRVSWITDDKEAE----SVVEYGKLPGR-YNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATT 125 (454)
Q Consensus 51 ~~~p~~v~l~~~~~~~~~v~W~t~~~~~~----~~v~y~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~ 125 (454)
...|..+.+.....+++.|.|.-...... -.|+|...... ........ . ...... .+.+|+|++.
T Consensus 17 P~~P~~~~~~~~~~~sv~l~W~p~~~~~~~i~~Y~v~~~~~~~~~~~w~~~~~---~-----~~~~~~--~i~~L~p~t~ 86 (127)
T 1uey_A 17 PNPPFDLELTDQLDKSVQLSWTPGDDNNSPITKFIIEYEDAMHKPGLWHHQTE---V-----SGTQTT--AQLNLSPYVN 86 (127)
T ss_dssp CCCCEEEEEECCSSSCEEEEEECCCCCSSCEEEEEEEEEBTTTCTTCEEEEEE---E-----ESSCCE--EEECCCTTCE
T ss_pred CcCCCCcEEEEccCCEEEEEEECCCCCCCCceEEEEEEEECCCCCCccEEEee---e-----CCCceE--EEecCCCCCE
Confidence 34778888877778999999996643332 34556543211 11111111 0 111122 3569999999
Q ss_pred EEEEeCc--------cCce-eEEECCC
Q 012895 126 YYYRCGG--------RGPE-FSFKMPP 143 (454)
Q Consensus 126 Y~Yrv~~--------~s~~-~~F~T~p 143 (454)
|.|||.. .+.. ..|+|++
T Consensus 87 Y~frV~A~n~~G~s~~S~~~~~~~T~~ 113 (127)
T 1uey_A 87 YSFRVMAVNSIGKSLPSEASEQYLTKA 113 (127)
T ss_dssp ECCEEEEEESSCBCCCCSCCCCEECCC
T ss_pred EEEEEEEEeCCccCCccccccceEcCC
Confidence 9999963 2333 4677754
No 133
>3lpw_A A77-A78 domain from titin; intracellular FNIII-tandem, structural protein; 1.65A {Homo sapiens}
Probab=94.84 E-value=0.18 Score=43.36 Aligned_cols=70 Identities=16% Similarity=0.292 Sum_probs=45.8
Q ss_pred CCCeeEEEEecCCCcEEEEEEeCCCC-----CccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEE
Q 012895 52 SDPQQVHISLAAKDYIRVSWITDDKE-----AESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTY 126 (454)
Q Consensus 52 ~~p~~v~l~~~~~~~~~v~W~t~~~~-----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y 126 (454)
..|..+++.....+++.|.|...... ..-.|+|.............. .-...+.|++|+|++.|
T Consensus 7 ~~P~~l~~~~~~~~sv~l~W~~p~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~-----------~~~~~~~~~~L~p~t~Y 75 (197)
T 3lpw_A 7 GPPQDLKVKEVTKTSVTLTWDPPLLDGGSKIKNYIVEKRESTRKAYSTVATN-----------CHKTSWKVDQLQEGCSY 75 (197)
T ss_dssp CCCEEEEEEEECSSCEEEEEECCSCCTTSCCCEEEEEEEETTCSSCEEEEEE-----------ECSSEEEECCCCTTCEE
T ss_pred CCCCCcEEEEecCCEEEEEEcCCccCCCCcccEEEEEEEECCCCccEEeecC-----------CCccEEEEcCCCCCCEE
Confidence 46777888777789999999987321 234677766543332222111 01234678999999999
Q ss_pred EEEeCc
Q 012895 127 YYRCGG 132 (454)
Q Consensus 127 ~Yrv~~ 132 (454)
.|||..
T Consensus 76 ~~~V~a 81 (197)
T 3lpw_A 76 YFRVLA 81 (197)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 999963
No 134
>3r8q_A Fibronectin; heparin, FNIII, heparin binding, cell adhesion; 2.40A {Homo sapiens} PDB: 1fnh_A
Probab=94.65 E-value=0.31 Score=45.07 Aligned_cols=85 Identities=9% Similarity=0.023 Sum_probs=54.2
Q ss_pred CCCCCCeeEEEEecCCCcEEEEEEeCCCC-CccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEE
Q 012895 49 RSESDPQQVHISLAAKDYIRVSWITDDKE-AESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYY 127 (454)
Q Consensus 49 ~~~~~p~~v~l~~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~ 127 (454)
.....|..+.+.....+++.|.|...+.. ..-.|+|............ . ...-...+.|++|+|++.|.
T Consensus 19 ~~p~~P~~l~~~~~~~~sv~l~W~~p~~~~~~Y~v~~~~~~~~~~~~~~------~----~~~~~~~~~i~~L~p~t~Y~ 88 (290)
T 3r8q_A 19 PAIPAPTDLKFTQVTPTSLSAQWTPPNVQLTGYRVRVTPKEKTGPMKEI------N----LAPDSSSVVVSGLMVATKYE 88 (290)
T ss_dssp -CCCCCEEEEEEEECSSCEEEEEECCSSCCCEEEEEEEESSSSSCCEEE------E----ECTTCCEEEECSCCSSCEEE
T ss_pred CCCCCCCceEEEECCCCEEEEEEeCCCCCeeEEEEEEEeCCCCCceEEE------E----cCCCccEEEeCCCCCCCEEE
Confidence 34567888888888899999999987532 3356777665432211111 0 11223457789999999999
Q ss_pred EEeCcc-------CceeEEECCC
Q 012895 128 YRCGGR-------GPEFSFKMPP 143 (454)
Q Consensus 128 Yrv~~~-------s~~~~F~T~p 143 (454)
|+|... .....|+|.+
T Consensus 89 ~~V~a~~~~g~s~~s~~~~~t~~ 111 (290)
T 3r8q_A 89 VSVYALKDTLTSRPAQGVVTTLE 111 (290)
T ss_dssp EEEEEEETTEECCCEEEEEECCC
T ss_pred EEEEEEeCCCCCCCcceeEecCC
Confidence 998631 1234577754
No 135
>1wf5_A Sidekick 2 protein; FNIII domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=94.62 E-value=0.095 Score=41.65 Aligned_cols=70 Identities=20% Similarity=0.278 Sum_probs=40.6
Q ss_pred CCeeE--EEEecCCCcEEEEEEeCCCCCc----cEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEE
Q 012895 53 DPQQV--HISLAAKDYIRVSWITDDKEAE----SVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTY 126 (454)
Q Consensus 53 ~p~~v--~l~~~~~~~~~v~W~t~~~~~~----~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y 126 (454)
.|..+ .+.....+++.|.|.-...... -.|+|.... ..+...... ...-...++|++|+|++.|
T Consensus 20 ~P~~~~~~~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~-~~~~~~~~~---------~~~~~~~~~v~~L~p~t~Y 89 (121)
T 1wf5_A 20 APEHPVATLSTVERRAINLTWTKPFDGNSPLIRYILEMSENN-APWTVLLAS---------VDPKATSVTVKGLVPARSY 89 (121)
T ss_dssp CCSSCEEEECSSSTTEEEEECCCCCCCSSCEEEEEEEEECTT-CCCEEEESS---------CCTTCCEEEEESCCTTCEE
T ss_pred cCCCcceeeEeccCCEEEEEEcCCCCCCCcceEEEEEEEcCC-CCceEeEcc---------cCCCccEEEECCcCCCCEE
Confidence 45555 4544557899999987643332 344554442 111111000 1122345788999999999
Q ss_pred EEEeCc
Q 012895 127 YYRCGG 132 (454)
Q Consensus 127 ~Yrv~~ 132 (454)
.|||..
T Consensus 90 ~frV~A 95 (121)
T 1wf5_A 90 QFRLCA 95 (121)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 999964
No 136
>2gee_A Hypothetical protein; fibronectin, EIIIB, cancer, neovascularization, cell adhesion, protein binding, oncoprotein; 2.01A {Homo sapiens} PDB: 2fnb_A
Probab=94.60 E-value=0.3 Score=42.69 Aligned_cols=70 Identities=10% Similarity=0.084 Sum_probs=45.1
Q ss_pred CCeeEEEEecCCCcEEEEEEeCCCC--CccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEEEEe
Q 012895 53 DPQQVHISLAAKDYIRVSWITDDKE--AESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYYYRC 130 (454)
Q Consensus 53 ~p~~v~l~~~~~~~~~v~W~t~~~~--~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Yrv 130 (454)
.|..+.+.....+++.|.|.-.... ..-.|+|...+........ . ...-.....|++|+|++.|.++|
T Consensus 25 ~P~~l~~~~~~~~sv~lsW~~p~~~~i~~Y~v~~~~~~~~~~~~~~-~---------~~~~~~~~~i~~L~p~t~Y~~~V 94 (203)
T 2gee_A 25 QPTDLSFVDITDSSIGLRWTPLNSSTIIGYRITVVAAGEGIPIFED-F---------VDSSVGYYTVTGLEPGIDYDISV 94 (203)
T ss_dssp CCEEEEEECCTTTCEEEEEECCSSSSCCEEEEEEEESSSSSCCEEE-E---------EETTCCEEEECSCCTTCEEEEEE
T ss_pred CCCccEEEecCCCEEEEEecCCCCCCccEEEEEEEECCCCCCceeE-E---------cCCCccEEEeCCCCCCCEEEEEE
Confidence 5777777777789999999987531 2346777665433221111 0 01122356789999999999999
Q ss_pred Cc
Q 012895 131 GG 132 (454)
Q Consensus 131 ~~ 132 (454)
..
T Consensus 95 ~a 96 (203)
T 2gee_A 95 YT 96 (203)
T ss_dssp EE
T ss_pred EE
Confidence 63
No 137
>1j8k_A Fibronectin; EDA, TYPEIII domain, protein binding; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=94.58 E-value=0.074 Score=40.34 Aligned_cols=70 Identities=16% Similarity=0.313 Sum_probs=43.6
Q ss_pred CCeeEEEEecCCCcEEEEEEeCCCC-CccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEEEEeC
Q 012895 53 DPQQVHISLAAKDYIRVSWITDDKE-AESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYYYRCG 131 (454)
Q Consensus 53 ~p~~v~l~~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Yrv~ 131 (454)
.|..+++.....+++.|+|.-.... ..-.|+|....+... . ... ...+-...++|+||+|||.|.++|.
T Consensus 4 ~P~~l~~~~~~~~si~lsW~~p~~~i~~Y~v~y~~~~~~~~-----~--~~~---~~~~~~~~~~l~~L~p~t~Y~~~V~ 73 (94)
T 1j8k_A 4 RPKGLAFTDVDVDSIKIAWESPQGQVSRYRVTYSSPEDGIH-----E--LFP---APDGEEDTAELQGLRPGSEYTVSVV 73 (94)
T ss_dssp CCCCCEEEEEETTEEEEECCCCSSCCSCEEEEEEETTTEEE-----E--ECC---CCCSSCCEEEECSCCCCSEEEEEEE
T ss_pred CCCccEEEeecCCEEEEEEcCCCCCcceEEEEEEeCCCCCc-----e--EEe---cCCCCccEEEeCCCCCCCEEEEEEE
Confidence 4667777776789999999665321 234666765432100 0 000 0112345678999999999999986
Q ss_pred c
Q 012895 132 G 132 (454)
Q Consensus 132 ~ 132 (454)
.
T Consensus 74 A 74 (94)
T 1j8k_A 74 A 74 (94)
T ss_dssp E
T ss_pred E
Confidence 4
No 138
>2edb_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=94.57 E-value=0.21 Score=39.56 Aligned_cols=68 Identities=19% Similarity=0.322 Sum_probs=43.7
Q ss_pred CCCeeEEEEecCCCcEEEEEEeCCCC----CccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEE
Q 012895 52 SDPQQVHISLAAKDYIRVSWITDDKE----AESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYY 127 (454)
Q Consensus 52 ~~p~~v~l~~~~~~~~~v~W~t~~~~----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~ 127 (454)
..|..+++.... +++.|+|.-...+ ..-.|+|..... ...... ...-....+|++|+|++.|.
T Consensus 19 ~~P~~l~~~~~~-~sv~l~W~~P~~~ng~i~gY~i~y~~~~~-~~~~~~-----------~~~~~~~~~l~~L~p~t~Y~ 85 (116)
T 2edb_A 19 DQPSSLHVRPQT-NCIIMSWTPPLNPNIVVRGYIIGYGVGSP-YAETVR-----------VDSKQRYYSIERLESSSHYV 85 (116)
T ss_dssp CCCSCEEEEECS-SCEEEEECCCSCTTBCCCEEEEEEEESST-TSEEEE-----------EETTCCEEEECSCCSSSBEE
T ss_pred CCCCCeEEEECC-CEEEEEEcCCCCCCCceeEEEEEEEeCCC-CeEEEE-----------eCCCeeEEEeCCCCCCCEEE
Confidence 377888888777 9999999877433 124566764221 111110 11123456789999999999
Q ss_pred EEeCc
Q 012895 128 YRCGG 132 (454)
Q Consensus 128 Yrv~~ 132 (454)
+||..
T Consensus 86 ~~V~A 90 (116)
T 2edb_A 86 ISLKA 90 (116)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99964
No 139
>3l5i_A Interleukin-6 receptor subunit beta; cytokine receptor, fibronectin type III domain, alternative cell membrane, disulfide bond; 1.90A {Homo sapiens} PDB: 3l5j_A
Probab=94.52 E-value=0.13 Score=47.70 Aligned_cols=78 Identities=22% Similarity=0.322 Sum_probs=48.4
Q ss_pred CeeEEEEecCCCcEEEEEEeC--C----CCCccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEE
Q 012895 54 PQQVHISLAAKDYIRVSWITD--D----KEAESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYY 127 (454)
Q Consensus 54 p~~v~l~~~~~~~~~v~W~t~--~----~~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~ 127 (454)
|.++.+.....+++.|+|.-. + ....-.|+|....+.. .... ...-....+|++|+|++.|.
T Consensus 200 ~p~~~~~~~~~~sv~l~W~~~~~~~~~g~i~~Y~v~~~~~~~~~-~~~~-----------~~~~~~~~~~~~L~p~t~Y~ 267 (290)
T 3l5i_A 200 GPTVRTKKVGKNEAVLEWDQLPVDVQNGFIRNYTIFYRTIIGNE-TAVN-----------VDSSHTEYTLSSLTSDTLYM 267 (290)
T ss_dssp CCCEEEEEECSSCEEEEECCCCHHHHSSCCCEEEEEEEETTSCC-EEEE-----------EETTCSEEEECSCCTTCEEE
T ss_pred CCeeeEeeccCCEEEEEEcCCChhccCCEEEEEEEEEEeCCCCe-EEEE-----------eCCCceEEEeCCCCCCCEEE
Confidence 336666666688999999732 1 1123456676654321 1110 11123356799999999999
Q ss_pred EEeCc-------cCceeEEECCC
Q 012895 128 YRCGG-------RGPEFSFKMPP 143 (454)
Q Consensus 128 Yrv~~-------~s~~~~F~T~p 143 (454)
++|.. .+....|+|+|
T Consensus 268 ~~V~A~n~~Gg~~s~~~~~~T~~ 290 (290)
T 3l5i_A 268 VRMAAYTDEGGKDGPEFTFTTPK 290 (290)
T ss_dssp EEEEEEETTEEEECCCEEEECCC
T ss_pred EEEEEEeCCCCCCCCceEeecCC
Confidence 99953 35677888875
No 140
>3n06_B PRL-R, prolactin receptor; PH dependence, hematopoietic cytokine, hormone-hormone recep complex; 2.00A {Homo sapiens} PDB: 3mzg_B 3n0p_B 3ncb_B 1bp3_B 3d48_R 3nce_B 3ncc_B 3ncf_B 3ew3_B 3npz_B 1f6f_B 2lfg_A
Probab=94.43 E-value=0.31 Score=42.83 Aligned_cols=82 Identities=15% Similarity=0.253 Sum_probs=52.7
Q ss_pred CCCCeeEEEEecC----CCcEEEEEEeCCCCC--------ccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEEC
Q 012895 51 ESDPQQVHISLAA----KDYIRVSWITDDKEA--------ESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIG 118 (454)
Q Consensus 51 ~~~p~~v~l~~~~----~~~~~v~W~t~~~~~--------~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 118 (454)
...|..+.+...+ .+++.|.|....... .-.|+|....+..+.... ........|.
T Consensus 103 p~pP~~l~~~~~~~~~~~~~l~l~W~~p~~~~~~~g~~~~~Y~v~y~~~~~~~~~~~~------------~~~~~~~~l~ 170 (210)
T 3n06_B 103 PDPPLELAVEVKQPEDRKPYLWIKWSPPTLIDLKTGWFTLLYEIRLKPEKAAEWEIHF------------AGQQTEFKIL 170 (210)
T ss_dssp CCCCEEEEEEEECCSSSCCEEEEEEECCTTCCCTTSSCCEEEEEEEECTTCSSCEEEE------------EETCSEEEEC
T ss_pred cCCCceEEEEEecCcCCCceEEEEcCCCCCccccCCeEEEEEEEEEecCCCCCCEEEe------------ccCceEEEEe
Confidence 4577778887643 588999999875321 235667655432222111 0112356789
Q ss_pred CCCCCCEEEEEeCc---------cCceeEEECCCC
Q 012895 119 PLEPATTYYYRCGG---------RGPEFSFKMPPA 144 (454)
Q Consensus 119 gL~p~t~Y~Yrv~~---------~s~~~~F~T~p~ 144 (454)
+|+|++.|.+||.. +|....|+||..
T Consensus 171 ~L~p~t~Y~v~Vra~~~~g~wS~wS~~~~~~Tp~~ 205 (210)
T 3n06_B 171 SLHPGQKYLVQVRCKPDHGYWSAWSPATFIQIPSD 205 (210)
T ss_dssp CCCTTCEEEEEEEEEESSSCCCCCCCCEEEECCTT
T ss_pred ccCCCCEEEEEEEEecCCCcccCCCCceeEECcCC
Confidence 99999999999852 466788999653
No 141
>2vkw_A Neural cell adhesion molecule 1,140 kDa isoform; adhesion receptor; 2.3A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 2vkx_A 1lwr_A
Probab=94.41 E-value=0.17 Score=44.31 Aligned_cols=84 Identities=18% Similarity=0.134 Sum_probs=50.2
Q ss_pred CCCeeEEEEecCCCcEEEEEEeCCC-----CCccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEE
Q 012895 52 SDPQQVHISLAAKDYIRVSWITDDK-----EAESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTY 126 (454)
Q Consensus 52 ~~p~~v~l~~~~~~~~~v~W~t~~~-----~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y 126 (454)
..|..+.+..... ++.|.|..... ...-.|+|.......+....-.. ...+......|++|+|+|.|
T Consensus 10 ~~P~~~~~~~~~~-s~~l~W~~p~~~~g~~i~~Y~v~~~~~~~~~~~~~~~~~-------~~~~~~~~~~i~~L~p~t~Y 81 (209)
T 2vkw_A 10 SSPSIDQVEPYSS-TAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYDA-------KEASMEGIVTIVGLKPETTY 81 (209)
T ss_dssp CCCEEEEEEECSS-CEEEEEECCSCCCSSCCCEEEEEEEESSCCCCEEEEEEH-------HHHHHHSEEEECCCCTTCEE
T ss_pred cCCcccEeeeccC-eEEEEEcCCCcCCCcceeEEEEEEeeCCCCCceEeEeec-------cCCCccceEEeCCCCCCCeE
Confidence 3577777766655 68999998742 12345777765433222211100 00112235678999999999
Q ss_pred EEEeCc--------cCceeEEECCC
Q 012895 127 YYRCGG--------RGPEFSFKMPP 143 (454)
Q Consensus 127 ~Yrv~~--------~s~~~~F~T~p 143 (454)
.|||.. .+....|+|.+
T Consensus 82 ~~~V~A~n~~G~~~~s~~~~~~T~~ 106 (209)
T 2vkw_A 82 AVRLAALNGKGLGEISAASEFKTQP 106 (209)
T ss_dssp EEEEEEEETTEECCCCCCEEEECCC
T ss_pred EEEEEEEcCCcccCCcccccccccC
Confidence 999963 24456678754
No 142
>1uem_A KIAA1568 protein; immunoglobulin-like beta-sandwich fold, fibronectin type III, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=94.30 E-value=0.096 Score=41.32 Aligned_cols=71 Identities=14% Similarity=0.211 Sum_probs=42.5
Q ss_pred CCCeeEEEEecCCCcEEEEEEeCCCCC----ccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEE
Q 012895 52 SDPQQVHISLAAKDYIRVSWITDDKEA----ESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYY 127 (454)
Q Consensus 52 ~~p~~v~l~~~~~~~~~v~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~ 127 (454)
..|..+.+.....+++.|.|....... .-.|+|.............. .. ....+.|++|+|++.|.
T Consensus 17 ~~P~~~~~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~--------~~--~~~~~~i~~L~p~t~Y~ 86 (117)
T 1uem_A 17 GPPSKPQVTDVTKNSVTLSWQPGTPGTLPASAYIIEAFSQSVSNSWQTVAN--------HV--KTTLYTVRGLRPNTIYL 86 (117)
T ss_dssp BCCCCCEEEEECSSCEEEECCCCBCSSSCCCEEEEEEEETTTEEEEEEEEE--------EE--CSSEEEECSCCTTCEEE
T ss_pred cCCCCCEEEEecCCEEEEEEeCCCCCCcCceEEEEEEEECCCCCceeEccc--------cc--CcCEEEECCCCCCCEEE
Confidence 356677777667889999998764222 24566654421111111000 01 12246789999999999
Q ss_pred EEeCc
Q 012895 128 YRCGG 132 (454)
Q Consensus 128 Yrv~~ 132 (454)
|||..
T Consensus 87 frV~A 91 (117)
T 1uem_A 87 FMVRA 91 (117)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99964
No 143
>2gee_A Hypothetical protein; fibronectin, EIIIB, cancer, neovascularization, cell adhesion, protein binding, oncoprotein; 2.01A {Homo sapiens} PDB: 2fnb_A
Probab=94.20 E-value=0.26 Score=43.17 Aligned_cols=70 Identities=19% Similarity=0.293 Sum_probs=46.0
Q ss_pred CCeeEEEEecCCCcEEEEEEeCCC--CCccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEEEEe
Q 012895 53 DPQQVHISLAAKDYIRVSWITDDK--EAESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYYYRC 130 (454)
Q Consensus 53 ~p~~v~l~~~~~~~~~v~W~t~~~--~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Yrv 130 (454)
.|..+.+...+.+++.|.|..... ...-.|+|....+....... . ...-...+.|+||+|+|.|.++|
T Consensus 116 ~P~~l~~~~~~~~sv~l~W~~p~~~~i~~Y~v~~~~~~~~~~~~~~------~----~~~~~~~~~i~~L~p~t~Y~~~V 185 (203)
T 2gee_A 116 PPTDLRFTNIGPDTMRVTWAPPPSIDLTNFLVRYSPVKNEEDVAEL------S----ISPSDNAVVLTNLLPGTEYVVSV 185 (203)
T ss_dssp CCEEEEEEEEETTEEEEEEECCSSCCCSEEEEEEEETTCGGGCEEE------E----ECTTCCEEEECSCCTTCEEEEEE
T ss_pred CCCceEEEEcCCCEEEEEEcCCCCCCccEEEEEEEECCCCCccEEE------E----cCCCcCEEEECCCCCCCEEEEEE
Confidence 678888877778999999998742 23456777664332111100 0 12224456789999999999999
Q ss_pred Cc
Q 012895 131 GG 132 (454)
Q Consensus 131 ~~ 132 (454)
..
T Consensus 186 ~A 187 (203)
T 2gee_A 186 SS 187 (203)
T ss_dssp EE
T ss_pred EE
Confidence 64
No 144
>2b5i_B Interleukin-2 receptor beta chain; four-helix bundle, fibronectin domain, cytokine-cytokine REC complex; HET: NAG; 2.30A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 3qaz_B* 2erj_B*
Probab=94.17 E-value=0.21 Score=44.55 Aligned_cols=84 Identities=15% Similarity=0.173 Sum_probs=54.0
Q ss_pred CCCeeEEEEecCCCcEEEEEEeCCCC------CccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCE
Q 012895 52 SDPQQVHISLAAKDYIRVSWITDDKE------AESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATT 125 (454)
Q Consensus 52 ~~p~~v~l~~~~~~~~~v~W~t~~~~------~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~ 125 (454)
..|.-+++...+.+...|+|..+... -.-.|+|...... +..... .. .....+.+.|.+|.|||.
T Consensus 107 ~pP~~l~~~~~~~~~l~lsW~~p~~~~~~~~~l~Yevry~~~~~~-w~~~~~--~~------~~~~~~~~~l~~L~p~t~ 177 (214)
T 2b5i_B 107 MAPISLQVVHVETHRCNISWEISQASHYFERHLEFEARTLSPGHT-WEEAPL--LT------LKQKQEWICLETLTPDTQ 177 (214)
T ss_dssp CCCEEEEEEEECSSCEEEEEECCSCCGGGTTCEEEEEEEECTTSC-STTSCC--EE------ECSCCCEEEECSCCTTCE
T ss_pred CCCceEEEEEecCCeEEEEECCCCccccCCCceEEEEEEecCCCC-hheeee--ee------ecccceEEEeccCCCCCE
Confidence 56788888877778899999987532 1345667665331 111100 00 112244677899999999
Q ss_pred EEEEeCc------------cCceeEEECCCC
Q 012895 126 YYYRCGG------------RGPEFSFKMPPA 144 (454)
Q Consensus 126 Y~Yrv~~------------~s~~~~F~T~p~ 144 (454)
|..||.. +|....|+|.|.
T Consensus 178 Y~vqVRa~~~~~~~G~WS~WS~~~~~~T~~~ 208 (214)
T 2b5i_B 178 YEFQVRVKPLQGEFTTWSPWSQPLAFRTKPA 208 (214)
T ss_dssp EEEEEEEEESCCSSCCCCCCCCCEEEECCC-
T ss_pred EEEEEEEeeCCCCCCCccCCCCCEEEEcCCC
Confidence 9999862 356788999875
No 145
>3lpw_A A77-A78 domain from titin; intracellular FNIII-tandem, structural protein; 1.65A {Homo sapiens}
Probab=94.15 E-value=0.21 Score=42.93 Aligned_cols=70 Identities=14% Similarity=0.255 Sum_probs=45.8
Q ss_pred CCCCeeEEEEecCCCcEEEEEEeCCCC-----CccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCE
Q 012895 51 ESDPQQVHISLAAKDYIRVSWITDDKE-----AESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATT 125 (454)
Q Consensus 51 ~~~p~~v~l~~~~~~~~~v~W~t~~~~-----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~ 125 (454)
...|..+.+...+.+++.|.|...... ..-.|+|.......+..... . -.....|++|+|++.
T Consensus 103 p~~p~~~~~~~~~~~~v~l~W~~p~~~~~~~i~~Y~v~~~~~~~~~~~~~~~----------~--~~~~~~~~~L~p~t~ 170 (197)
T 3lpw_A 103 PLPPGKITLMDVTRNSVSLSWEKPEHDGGSRILGYIVEMQTKGSDKWATCAT----------V--KVTEATITGLIQGEE 170 (197)
T ss_dssp CCCCSCEEEEEECSSCEEEEECCCSCCTTSCCCEEEEEEEETTCSCCEEEEE----------E--SSSEEEECCCCTTCE
T ss_pred CCCCcccEEEeccCCeEEEEecCCCcCCCCcccEEEEEEEeCCCCceEEeec----------c--cccEEEeCCcCCCCE
Confidence 356778888777789999999976432 22466676554332222111 0 122357899999999
Q ss_pred EEEEeCc
Q 012895 126 YYYRCGG 132 (454)
Q Consensus 126 Y~Yrv~~ 132 (454)
|.|+|..
T Consensus 171 Y~~~V~A 177 (197)
T 3lpw_A 171 YSFRVSA 177 (197)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 9999974
No 146
>1cfb_A Drosophila neuroglian; neural adhesion molecule; HET: NAG; 2.00A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1
Probab=94.13 E-value=0.23 Score=43.32 Aligned_cols=73 Identities=10% Similarity=0.045 Sum_probs=45.6
Q ss_pred CCCCeeEEEEecCCCcEEEEEEeCC--C----CCccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCC
Q 012895 51 ESDPQQVHISLAAKDYIRVSWITDD--K----EAESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPAT 124 (454)
Q Consensus 51 ~~~p~~v~l~~~~~~~~~v~W~t~~--~----~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t 124 (454)
...|..+.+.....+++.|.|.... . ...-.|+|.............. .........|++|+|++
T Consensus 105 ~~~P~~~~~~~~~~~sv~l~W~~p~~~~~ng~i~~Y~v~~~~~~~~~~~~~~~~---------~~~~~~~~~i~~L~p~t 175 (205)
T 1cfb_A 105 FKNPDNVVGQGTEPNNLVISWTPMPEIEHNAPNFHYYVSWKRDIPAAAWENNNI---------FDWRQNNIVIADQPTFV 175 (205)
T ss_dssp SCCCSCCEEECSSTTCEEEECCCCCGGGTCSSSCEEEEEEEESSTTCCCEEEEE---------CCTTCCEEEECSCCSSC
T ss_pred CCCCeeeEeecCCCCeEEEEEECCCccccCCCceEEEEEEEECCCCCCcEEEEe---------cCCCccEEEEcCCCCCc
Confidence 3467777777777889999998764 1 1234666766544321111000 11123456789999999
Q ss_pred EEEEEeCc
Q 012895 125 TYYYRCGG 132 (454)
Q Consensus 125 ~Y~Yrv~~ 132 (454)
.|.+||..
T Consensus 176 ~Y~~~V~A 183 (205)
T 1cfb_A 176 KYLIKVVA 183 (205)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEEE
Confidence 99999964
No 147
>2ha1_A Fibronectin; beta sandwich, protein-protein complex, rigid BODY docking, cell adhesion, structural protein; NMR {Homo sapiens}
Probab=94.13 E-value=0.14 Score=44.67 Aligned_cols=69 Identities=16% Similarity=0.232 Sum_probs=44.3
Q ss_pred CCeeEEEEecC--CCcEEEEEEeCC--CCCccEEEEeecCCCCc-eEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEE
Q 012895 53 DPQQVHISLAA--KDYIRVSWITDD--KEAESVVEYGKLPGRYN-TVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYY 127 (454)
Q Consensus 53 ~p~~v~l~~~~--~~~~~v~W~t~~--~~~~~~v~y~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~ 127 (454)
.|.++.+.... .+++.|.|.... ....-.|+|........ .... ..+-...+.|+||+|++.|.
T Consensus 2 ~P~~l~v~~v~~~~~si~l~W~~p~~~~i~~Y~v~~~~~~~~~~~~~~~-----------~~~~~~~~~i~~L~p~t~Y~ 70 (201)
T 2ha1_A 2 GPVEVFITETPSQPNSHPIQWNAPQPSHISKYILRWRPKNSVGRWKEAT-----------IPGHLNSYTIKGLKPGVVYE 70 (201)
T ss_dssp CCCEEECCSCSCCSSCEEEEEECCSSTTCCEEEEEEEETTCSSCCEEEE-----------ECTTCCEEEECSCCTTEEEE
T ss_pred CceeEEEEecCCCCCEEEEEEeCCCCCCceEEEEEEEECCCCCceEEEe-----------cCCCccEEEecCCCCCCEEE
Confidence 46677777655 889999999873 12345677775433211 1111 11123367899999999999
Q ss_pred EEeCc
Q 012895 128 YRCGG 132 (454)
Q Consensus 128 Yrv~~ 132 (454)
+||..
T Consensus 71 ~~V~a 75 (201)
T 2ha1_A 71 GQLIS 75 (201)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99964
No 148
>1bqu_A Protein (GP130); cytokine receptor, glycoprotein 130, interleukine 6 R beta subunit, signaling protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1pvh_A 1bj8_A
Probab=94.09 E-value=0.15 Score=44.99 Aligned_cols=85 Identities=13% Similarity=0.187 Sum_probs=51.2
Q ss_pred CCCCeeEEEEec--CCCcEEEEEEeCCCCC----ccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCC
Q 012895 51 ESDPQQVHISLA--AKDYIRVSWITDDKEA----ESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPAT 124 (454)
Q Consensus 51 ~~~p~~v~l~~~--~~~~~~v~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t 124 (454)
...|..+.+... ..+++.|.|....... .-.|+|.......+...... ....-.....|++|+|+|
T Consensus 104 p~pP~~~~~~~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~y~~~~~~~~~~~~~~--------~~~~~~~~~~i~~L~p~t 175 (215)
T 1bqu_A 104 PNPPHNLSVINSEELSSILKLTWTNPSIKSVIILKYNIQYRTKDASTWSQIPPE--------DTASTRSSFTVQDLKPFT 175 (215)
T ss_dssp CCCCEEEEEECC--CCSCEEEEEECCGGGGTSCEEEEEEEEETTCSSCEECCGG--------GGCSCCSEEEECSCCSSE
T ss_pred CCCCCceEEEEecCCCceEEEEEeCCCCCCcceEEEEEEEccCCCCCceEeccc--------cccCccceEEeCCCCCCC
Confidence 346777888764 4789999998764321 24566765543222211100 001223456789999999
Q ss_pred EEEEEeCc-----------cCceeEEECCC
Q 012895 125 TYYYRCGG-----------RGPEFSFKMPP 143 (454)
Q Consensus 125 ~Y~Yrv~~-----------~s~~~~F~T~p 143 (454)
.|.+||.. ++....++|++
T Consensus 176 ~Y~~~V~A~n~~g~g~~S~~S~~~~~~T~~ 205 (215)
T 1bqu_A 176 EYVFRIRCMKEDGKGYWSDWSEEASGITYE 205 (215)
T ss_dssp EEEEEEEEEETTSCSCCCCCCCCEEEEECC
T ss_pred EEEEEEEEccCCCCCccCCCCCcccccccc
Confidence 99999853 23456677765
No 149
>3p4l_A Neogenin; iron homeostasis, hemojuvelin receptor, FNIII domain, fibron type III, cell adhesion; 1.80A {Homo sapiens} PDB: 1x5k_A
Probab=93.63 E-value=0.28 Score=43.03 Aligned_cols=84 Identities=19% Similarity=0.283 Sum_probs=51.1
Q ss_pred CCCCCeeEEEEecC--CCcEEEEEEeCCCC----CccEEEEeecCCCCc--eEEEeEeEEEeeeeeecCeEEEEEECCCC
Q 012895 50 SESDPQQVHISLAA--KDYIRVSWITDDKE----AESVVEYGKLPGRYN--TVATGEHTSYQFFFYKSGKIHHVKIGPLE 121 (454)
Q Consensus 50 ~~~~p~~v~l~~~~--~~~~~v~W~t~~~~----~~~~v~y~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~gL~ 121 (454)
+...|..+.+...+ .+++.|.|.-...+ ..-.|+|........ .... . ..+-...+.|++|+
T Consensus 105 P~~~P~~~~~~~~~~s~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~~-~---------~~~~~~~~~i~~L~ 174 (211)
T 3p4l_A 105 PTSPPKDVTVVSKEGKPKTIIVNWQPPSEANGKITGYIIYYSTDVNAEIHDWVIE-P---------VVGNRLTHQIQELT 174 (211)
T ss_dssp CCSCCEEEEEEEETTEEEEEEEEEECCTTCCSCCCEEEEEEESCTTSCGGGSEEE-E---------EESSCSEEEECCCC
T ss_pred CCCCCcceEEEecCCCCCEEEEEECCCCCCCCCEEEEEEEEEECCCCCCCceEEE-E---------ecCCeeEEEEcCCC
Confidence 34478888888774 68999999976432 223566765443211 1110 0 11123356789999
Q ss_pred CCCEEEEEeCc--------cCceeEEECCC
Q 012895 122 PATTYYYRCGG--------RGPEFSFKMPP 143 (454)
Q Consensus 122 p~t~Y~Yrv~~--------~s~~~~F~T~p 143 (454)
|++.|.++|.. .++...|+|..
T Consensus 175 p~t~Y~~~V~A~n~~G~g~~S~~v~~~~~~ 204 (211)
T 3p4l_A 175 LDTPYYFKIQARNSKGMGPMSEAVQFRTPK 204 (211)
T ss_dssp TTCEEEEEEEEEETTEECCCCCCEEEECC-
T ss_pred CCCEEEEEEEEEcCCccCCCCCCEEccCcc
Confidence 99999999963 24555666543
No 150
>2ibg_A CG9211-PA, GH03927P; IHOG, fibronectin type III, protein binding; 2.20A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 PDB: 2ibb_A
Probab=93.53 E-value=0.2 Score=44.05 Aligned_cols=80 Identities=19% Similarity=0.301 Sum_probs=43.6
Q ss_pred CCeeEEEEecCCCcEEEEEEeCCCCC----ccEEEEeecCCCCceEEEeEeEEEeee--eeecCeEEEEEECCCCCCCEE
Q 012895 53 DPQQVHISLAAKDYIRVSWITDDKEA----ESVVEYGKLPGRYNTVATGEHTSYQFF--FYKSGKIHHVKIGPLEPATTY 126 (454)
Q Consensus 53 ~p~~v~l~~~~~~~~~v~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~gL~p~t~Y 126 (454)
.|..+++.....+++.|.|.-..... .-.|+|...+.............+... .....-...+.|++|+|+|.|
T Consensus 4 pP~~~~~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y 83 (214)
T 2ibg_A 4 PPTPPNVTRLSDESVMLRWMVPRNDGLPIVIFKVQYRMVGKRKNWQTTNDNIPYGKPKWNSELGKSFTASVTDLKPQHTY 83 (214)
T ss_dssp CCCCCEEEEEETTEEEEEEEEECCSSCCEEEEEEEEEESSSSCCCEECSCCEECCSSSCSSSSEEEEEEEECSCCTTCEE
T ss_pred CCCCCEeeEecCCEEEEEEECCCCCCCCceEEEEEEEECCCCCcCcccccccCccccccccccCcceeEEecCCcCCCEE
Confidence 45555566556889999998775322 234556554321111111110000000 000123456789999999999
Q ss_pred EEEeCc
Q 012895 127 YYRCGG 132 (454)
Q Consensus 127 ~Yrv~~ 132 (454)
.|||..
T Consensus 84 ~~~V~A 89 (214)
T 2ibg_A 84 RFRILA 89 (214)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 999864
No 151
>1wfn_A Sidekick 2; FN3, cell adhesion, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=93.50 E-value=0.14 Score=40.48 Aligned_cols=70 Identities=14% Similarity=0.211 Sum_probs=43.1
Q ss_pred CCeeEEEEecCCCcEEEEEEeCCCCC----ccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEEE
Q 012895 53 DPQQVHISLAAKDYIRVSWITDDKEA----ESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYYY 128 (454)
Q Consensus 53 ~p~~v~l~~~~~~~~~v~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y 128 (454)
.|..+++.....+++.|.|....... .-.|+|........... . ....-...+.|++|+|++.|.+
T Consensus 20 ~P~~l~~~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~----~------~~~~~~~~~~i~~L~p~t~Y~~ 89 (119)
T 1wfn_A 20 PVGHLSFSEILDTSLKVSWQEPGEKNGILTGYRISWEEYNRTNTRVT----H------YLPNVTLEYRVTGLTALTTYTI 89 (119)
T ss_dssp CCSCCEEESCCSSEEEEECCCCTTCCSCCCEEEEEEEESSCGGGCCC----E------EECSSCCEEEEESCCTTCEEEE
T ss_pred CCCceEEEECCCCEEEEEEcCCCCCCCcEEEEEEEEEECCCCCceEE----E------EeCCCceEEEEcCCCCCCEEEE
Confidence 46667776666889999998764322 23566655432111000 0 0112344567899999999999
Q ss_pred EeCc
Q 012895 129 RCGG 132 (454)
Q Consensus 129 rv~~ 132 (454)
||..
T Consensus 90 ~V~A 93 (119)
T 1wfn_A 90 EVAA 93 (119)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9964
No 152
>1uc6_A CNTF receptor, ciliary neurotrophic factor receptor alpha; cytokine, leukemia inhibitory factor, cytokine receptor; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=93.25 E-value=0.37 Score=37.65 Aligned_cols=69 Identities=13% Similarity=0.100 Sum_probs=45.0
Q ss_pred CCCeeEEEEecC--CCcEEEEEEeCCC---C----CccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCC
Q 012895 52 SDPQQVHISLAA--KDYIRVSWITDDK---E----AESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEP 122 (454)
Q Consensus 52 ~~p~~v~l~~~~--~~~~~v~W~t~~~---~----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p 122 (454)
..|..+.+.... .+++.|.|..+.. + -.-.|+|.......+...... . ...+.|.+|+|
T Consensus 9 ~pP~~l~v~~~~~~~~~l~lsW~~P~~w~~~~~~~l~Y~v~y~~~~~~~w~~~~~~----------~--~~~~~l~~L~p 76 (109)
T 1uc6_A 9 DPPENVVARPVPSNPRRLEVTWQTPSTWPDPESFPLKFFLRYRPLILDQWQHVELS----------N--GTAHTITDAYA 76 (109)
T ss_dssp CCCEEEEEEECTTCTTCEEEEEECCTTCCCTTTTTBCEEEEEEESSSCCCCCEEES----------S--CSEEEETTCCS
T ss_pred CCCcceEEEEcCCCCCEEEEEECCCCCccCCCcEEEEEEEEEEECCCCCcEEEecc----------c--CCEEEEeCCCC
Confidence 467777777643 6899999998753 1 235677776654322221110 1 13467899999
Q ss_pred CCEEEEEeCc
Q 012895 123 ATTYYYRCGG 132 (454)
Q Consensus 123 ~t~Y~Yrv~~ 132 (454)
|+.|.+||..
T Consensus 77 ~t~Y~~~VRa 86 (109)
T 1uc6_A 77 GKEYIIQVAA 86 (109)
T ss_dssp SSCEEEEEEC
T ss_pred CCEEEEEEEE
Confidence 9999999964
No 153
>3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A* 2x11_A 3mx0_A* 3mbw_A*
Probab=93.22 E-value=0.32 Score=49.91 Aligned_cols=81 Identities=19% Similarity=0.266 Sum_probs=50.1
Q ss_pred CCCeeEEEEecCCCcEEEEEEeCCCCC----ccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEE
Q 012895 52 SDPQQVHISLAAKDYIRVSWITDDKEA----ESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYY 127 (454)
Q Consensus 52 ~~p~~v~l~~~~~~~~~v~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~ 127 (454)
..|..+.+.....+++.|+|..+..+. .-.|+|............ ..-...++|++|+|+|.|.
T Consensus 442 ~~Ps~~~~~~~s~tSV~LsW~pP~~~ng~I~~Y~V~y~~~~~~~~~~~v------------~~~~ts~~l~gL~P~T~Y~ 509 (536)
T 3fl7_A 442 TEPPKVRLEGRSTTSLSVSWSIPPPQQSRVWKYEVTYRKKGDSNSYNVR------------RTEGFSVTLDDLAPDTTYL 509 (536)
T ss_dssp CCCCEEEEEECCC-CCEEEEECCTTTTTTCSEEEEEEEEC--CCCCEEE------------EESSSEEECCSCCSSCEEE
T ss_pred cCCCCCceeeccCCeEEEEEECCcCCCCcccEEEEEEEECCCCceEEEE------------cCCCCEEEECCCCCCCEEE
Confidence 457777775555889999999764322 346777665432111100 1112346789999999999
Q ss_pred EEeCc--------cCceeEEECCCC
Q 012895 128 YRCGG--------RGPEFSFKMPPA 144 (454)
Q Consensus 128 Yrv~~--------~s~~~~F~T~p~ 144 (454)
+||.. .|....|+|++.
T Consensus 510 frVrA~n~~G~Gp~S~~v~~~T~~~ 534 (536)
T 3fl7_A 510 VQVQALTQEGQGAGSKVHEFQTLSP 534 (536)
T ss_dssp EEEEEECC---CEECCCEEEECCC-
T ss_pred EEEEEEcCCcccCCCCCEEEEeCCC
Confidence 99963 356788999774
No 154
>2ekj_A Collagen alpha-1(XX) chain; KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=93.19 E-value=0.051 Score=42.44 Aligned_cols=72 Identities=21% Similarity=0.286 Sum_probs=45.5
Q ss_pred CCCCeeEEEEecCCCcEEEEEEeCCCC-CccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEEEE
Q 012895 51 ESDPQQVHISLAAKDYIRVSWITDDKE-AESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYYYR 129 (454)
Q Consensus 51 ~~~p~~v~l~~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Yr 129 (454)
...|..+++.....+++.|+|...... ..-.|+|.......... . .. ..+-...++|+||+|+|.|.++
T Consensus 8 p~~P~~l~v~~~t~~si~lsW~~p~g~i~~Y~v~y~~~~~~~~~~---~---~~----v~~~~~~~~l~~L~p~t~Y~~~ 77 (105)
T 2ekj_A 8 RSPPSNLALASETPDSLQVSWTPPLGRVLHYWLTYAPASGLGPEK---S---VS----VPGARSHVTLPDLQAATKYRVL 77 (105)
T ss_dssp CCCCEEEEEEEEETTEEEEEEECCSSCCSBBCBBCCCTTSCSCCC---C---BC----CBTTSSEEEECSCCSSCCCBCB
T ss_pred CCCCCceEEEeCCCCEEEEEEeCCCCcceEEEEEEEECCCCCccE---E---EE----eCCCcCEEEeCCCCCCCEEEEE
Confidence 346788888877799999999887422 23355565443211000 0 00 1122345689999999999999
Q ss_pred eCc
Q 012895 130 CGG 132 (454)
Q Consensus 130 v~~ 132 (454)
|..
T Consensus 78 V~A 80 (105)
T 2ekj_A 78 VSA 80 (105)
T ss_dssp BCB
T ss_pred EEE
Confidence 974
No 155
>1cd9_B G-CSF-R, protein (G-CSF receptor); class1 cytokine, hematopoietic receptor, signal transduction cytokine; HET: NAG; 2.80A {Mus musculus} SCOP: b.1.2.1 b.1.2.1 PDB: 1pgr_B 1cto_A 1gcf_A
Probab=93.13 E-value=0.34 Score=42.66 Aligned_cols=83 Identities=14% Similarity=0.208 Sum_probs=51.0
Q ss_pred CCCCeeEEEEec------CCCcEEEEEEeCCCCC----ccEEEEe-ecCCCCceEEEeEeEEEeeeeeecCeEEEEEECC
Q 012895 51 ESDPQQVHISLA------AKDYIRVSWITDDKEA----ESVVEYG-KLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGP 119 (454)
Q Consensus 51 ~~~p~~v~l~~~------~~~~~~v~W~t~~~~~----~~~v~y~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g 119 (454)
...|..+.+... ..+++.|.|..+.... .-.|+|. ......+..+.. ..+....+.|.+
T Consensus 109 p~pP~~~~~~~~~~~~~~~~~~~~l~W~~p~~~~~~~l~Y~v~y~~~~~~~~w~~~~~----------~~~~~~~~~l~~ 178 (215)
T 1cd9_B 109 LEPPMLQALDIGPDVVSHQPGCLWLSWKPWKPSEYMEQECELRYQPQLKGANWTLVFH----------LPSSKDQFELCG 178 (215)
T ss_dssp CCCCEEEECCC-------CCSCEEEEEECCGGGTTSCEEEEEEEEESSTTCCCEEEEE----------EESCEEEEEECC
T ss_pred eCCCcEEEEEEeccccCCCCCeEEEEEeCCCCCCeEEEEEEEEEccCCCCCCcEEEec----------ccCcceEEEEcC
Confidence 456777776654 4678999998774322 3456776 443332222211 011235678999
Q ss_pred CCCCCEEEEEeCc-----------cCceeEEECCC
Q 012895 120 LEPATTYYYRCGG-----------RGPEFSFKMPP 143 (454)
Q Consensus 120 L~p~t~Y~Yrv~~-----------~s~~~~F~T~p 143 (454)
|+|+|.|.+||.. +|....|+|+.
T Consensus 179 L~p~t~Y~~~Vra~~~~g~G~wS~wS~~~~~~T~e 213 (215)
T 1cd9_B 179 LHQAPVYTLQMRCIRSSLPGFWSPWSPGLQLRPTM 213 (215)
T ss_dssp CCSCSCEEEEEEEEESSSCCCCCCCCCCEEECCCC
T ss_pred CCCCCEEEEEEEeeECCCCCCCcCCCCccceecCC
Confidence 9999999999852 35566777765
No 156
>1i1r_A GP130, interleukin-6 receptor beta chain; cytokine/receptor complex, GP130; 2.40A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1p9m_A
Probab=92.97 E-value=0.32 Score=45.47 Aligned_cols=85 Identities=13% Similarity=0.187 Sum_probs=52.5
Q ss_pred CCCCeeEEEEec--CCCcEEEEEEeCCCCC----ccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCC
Q 012895 51 ESDPQQVHISLA--AKDYIRVSWITDDKEA----ESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPAT 124 (454)
Q Consensus 51 ~~~p~~v~l~~~--~~~~~~v~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t 124 (454)
...|..+.+... ..+++.|.|..+.... .-.|+|.......+..+... ....-.....|++|+|+|
T Consensus 200 p~pP~~~~v~~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~y~~~~~~~w~~~~~~--------~~~~~~~~~~l~~L~p~t 271 (303)
T 1i1r_A 200 PNPPHNLSVINSEELSSILKLTWTNPSIKSVIILKYNIQYRTKDASTWSQIPPE--------DTASTRSSFTVQDLKPFT 271 (303)
T ss_dssp CCCCEEEEEECCSSSSSCEEEEEECCGGGGTSCEEEEEEEEETTCSSCEECCGG--------GGCSCCSEEEECSCCTTC
T ss_pred cCCCcceEEEEecCCCCEEEEEECCCCCCCcccEEEEEEEEeCCCCCceEEccc--------cCCCceeEEEeCCCCCCC
Confidence 346777777654 3689999999775321 23667766543222221100 001223456799999999
Q ss_pred EEEEEeCc-----------cCceeEEECCC
Q 012895 125 TYYYRCGG-----------RGPEFSFKMPP 143 (454)
Q Consensus 125 ~Y~Yrv~~-----------~s~~~~F~T~p 143 (454)
.|.+||.. +|+...|+|+.
T Consensus 272 ~Y~~rV~A~n~~G~G~~S~wS~~~~~~T~e 301 (303)
T 1i1r_A 272 EYVFRIRCMKEDGKGYWSDWSEEASGITYE 301 (303)
T ss_dssp EEEEEEEEEETTSCSCCCCCCCCEEEECCC
T ss_pred EEEEEEEeccCCCCCCcCCCCCccceeCCc
Confidence 99999863 35667788865
No 157
>2vkw_A Neural cell adhesion molecule 1,140 kDa isoform; adhesion receptor; 2.3A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 2vkx_A 1lwr_A
Probab=92.76 E-value=0.37 Score=42.14 Aligned_cols=71 Identities=18% Similarity=0.196 Sum_probs=44.3
Q ss_pred CCCCeeEEEEecCCCcEEEEEEeCCCC----CccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEE
Q 012895 51 ESDPQQVHISLAAKDYIRVSWITDDKE----AESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTY 126 (454)
Q Consensus 51 ~~~p~~v~l~~~~~~~~~v~W~t~~~~----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y 126 (454)
...|..+.+.....+++.|.|..+... ..-.|+|............ ...-...+.|++|+|++.|
T Consensus 110 P~~P~~~~~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~-----------~~~~~~~~~i~~L~p~t~Y 178 (209)
T 2vkw_A 110 PSAPKLEGQMGEDGNSIKVNLIKQDDGGSPIRHYLVRYRALSSEWKPEIR-----------LPSGSDHVMLKSLDWNAEY 178 (209)
T ss_dssp CCCCEEEEEECTTSSCEEEEEECCCCTTSCCCEEEEEEEETTSCCCCCEE-----------ECTTCCEEEECSCCTTCEE
T ss_pred CCCCcccccccccCCeEEEEEECcccCCCCCceEEEEEECCCCCCceeee-----------cCCCccEEEecCCCCCCEE
Confidence 346667776666689999999987322 2346677662221111110 1112234678999999999
Q ss_pred EEEeCc
Q 012895 127 YYRCGG 132 (454)
Q Consensus 127 ~Yrv~~ 132 (454)
.|||..
T Consensus 179 ~~~V~A 184 (209)
T 2vkw_A 179 EVYVVA 184 (209)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 999964
No 158
>1cfb_A Drosophila neuroglian; neural adhesion molecule; HET: NAG; 2.00A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1
Probab=92.74 E-value=0.49 Score=41.16 Aligned_cols=70 Identities=11% Similarity=0.195 Sum_probs=42.8
Q ss_pred CCCeeEEEEecCCCcEEEEEEeCCCC----CccEEEEeecCCC-CceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEE
Q 012895 52 SDPQQVHISLAAKDYIRVSWITDDKE----AESVVEYGKLPGR-YNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTY 126 (454)
Q Consensus 52 ~~p~~v~l~~~~~~~~~v~W~t~~~~----~~~~v~y~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y 126 (454)
..|..+.+.. ..+++.|.|.-.... ..-.|+|...... .+...... .++......+ +|+|+|.|
T Consensus 7 ~~P~~~~~~~-~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~w~~~~~~---------~~~~~~~~~~-~L~p~t~Y 75 (205)
T 1cfb_A 7 NAPKLTGITC-QADKAEIHWEQQGDNRSPILHYTIQFNTSFTPASWDAAYEK---------VPNTDSSFVV-QMSPWANY 75 (205)
T ss_dssp CCCEEEEEEE-CSSEEEEEEECCCCTTSCCCEEEEEEEESSSTTCCEEEEEE---------EETTCSEEEE-ECCSSEEE
T ss_pred CCCCCcEEEe-cCCEEEEEEECcccCCCceEEEEEEEecCCCCCCceeeeec---------cCCCceEEEE-eCCCCCEE
Confidence 4678888888 899999999987422 2345677654321 12111111 0111123345 89999999
Q ss_pred EEEeCc
Q 012895 127 YYRCGG 132 (454)
Q Consensus 127 ~Yrv~~ 132 (454)
.|||..
T Consensus 76 ~~~V~A 81 (205)
T 1cfb_A 76 TFRVIA 81 (205)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 999863
No 159
>3t1w_A Four-domain fibronectin fragment; human fibronectin, FN type-III domain, oncofetal splice VARI extra-domain B, EIIIB, ED-B, angiogenesis, integrin; 2.40A {Homo sapiens} PDB: 4gh7_B
Probab=92.69 E-value=0.37 Score=46.29 Aligned_cols=72 Identities=14% Similarity=0.185 Sum_probs=46.5
Q ss_pred CCCeeEEEEecCCC-cEEEEEEeCCC--CCccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEEE
Q 012895 52 SDPQQVHISLAAKD-YIRVSWITDDK--EAESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYYY 128 (454)
Q Consensus 52 ~~p~~v~l~~~~~~-~~~v~W~t~~~--~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y 128 (454)
..|..+.+.....+ ++.|.|.-... ...-.|+|....+......... ...-...+.|++|+|++.|.|
T Consensus 4 ~~P~~l~~~~~~~~~sv~l~W~~~~~~~~~~Y~v~~~~~~~~~~~~~~~~---------~~~~~~~~~i~~L~p~t~Y~~ 74 (375)
T 3t1w_A 4 SPPTNLHLEANPDTGVLTVSWERSTTPDITGYRITTTPTNGQQGNSLEEV---------VHADQSSCTFDNLSPGLEYNV 74 (375)
T ss_dssp CCCEEEEEEEETTTTEEEEEEECCSCSSCCEEEEEEEETTCTTSCCEEEE---------EETTCCEEEECCCCTTCCEEE
T ss_pred CCCCccEEEecCCCeEEEEEEeCCCCCCeeeEEEEEEECCCCCCcceeEE---------cCCCccEEEEcCCcCCCEEEE
Confidence 46788888877777 99999998752 2345677776543211111100 111234567899999999999
Q ss_pred EeCc
Q 012895 129 RCGG 132 (454)
Q Consensus 129 rv~~ 132 (454)
+|..
T Consensus 75 ~V~a 78 (375)
T 3t1w_A 75 SVYT 78 (375)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9964
No 160
>2w1n_A O-GLCNACASE NAGJ; hexosaminidase, glycoside hydrolase, fibronectin type-III, beta-N-acetylglucosaminidase, cohesin, hydrolase; 1.80A {Clostridium perfringens}
Probab=92.53 E-value=0.98 Score=40.09 Aligned_cols=76 Identities=16% Similarity=0.269 Sum_probs=47.0
Q ss_pred CCCeeEEEEecCCCcEEEEEEeCCCCCccEEEEeecCCCCceE--EEeEeEEEeeeeeecCeEEEEEECCCCCCCEEEEE
Q 012895 52 SDPQQVHISLAAKDYIRVSWITDDKEAESVVEYGKLPGRYNTV--ATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYYYR 129 (454)
Q Consensus 52 ~~p~~v~l~~~~~~~~~v~W~t~~~~~~~~v~y~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Yr 129 (454)
..|..++.+....+++.++|..+.. ....-.|..--+. ... ..++.++ .+++||+|+|.|.||
T Consensus 152 ~Pp~NL~At~VT~tSVtLsW~aP~~-~~GI~gY~ly~~g-~~v~~v~~~~ts-------------yt~~gLk~~TeYsF~ 216 (238)
T 2w1n_A 152 NPVRDFKASEINKKNVTVTWTEPET-TEGLEGYILYKDG-KKVAEIGKDETS-------------YTFKKLNRHTIYNFK 216 (238)
T ss_dssp CCCEEEEEEEECSSCEEEEEECCSC-CTTEEEEEEEETT-EEEEEEETTCCE-------------EEECSCCTTCEEEEE
T ss_pred CCCCceEEEEccCCeEEEEecCCCC-CCCceeEEEEeCC-ceeEEeeccceE-------------EEecCCCCCCEEEEE
Confidence 5677788888889999999999853 3233444432111 111 1111122 347899999999999
Q ss_pred eCc--------cCceeEEECC
Q 012895 130 CGG--------RGPEFSFKMP 142 (454)
Q Consensus 130 v~~--------~s~~~~F~T~ 142 (454)
|.. ..+...+||.
T Consensus 217 V~A~d~~G~~Ss~e~vtVrTl 237 (238)
T 2w1n_A 217 IAAKYSNGEVSSKESLTLRTA 237 (238)
T ss_dssp EEEEETTSCBCCCEEEEEECC
T ss_pred EEEEeCCCCccccCcEEEEec
Confidence 963 2344566663
No 161
>2h41_A Fibronectin; beta sandwich, cell adhesion, structural protein; NMR {Homo sapiens} PDB: 2h45_A
Probab=92.04 E-value=0.091 Score=40.51 Aligned_cols=60 Identities=18% Similarity=0.197 Sum_probs=37.5
Q ss_pred CCCcEEEEEEeCCCC-CccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEEEEeCc
Q 012895 63 AKDYIRVSWITDDKE-AESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYYYRCGG 132 (454)
Q Consensus 63 ~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Yrv~~ 132 (454)
..+++.|+|...... ..-.|+|....+...... .. .++-...+.|+||.|||.|..+|..
T Consensus 18 t~~S~~lsW~~p~~~v~~Y~I~y~~~~g~~~~~~------~~----v~g~~~s~~l~~L~PgT~Y~V~v~a 78 (95)
T 2h41_A 18 TASSFVVSWVSASDTVSGFRVEYELSEEGDEPQY------LD----LPSTATSVNIPDLLPGRKYIVNVYQ 78 (95)
T ss_dssp GGGCEEEECCCSCTTEEEEEEEEEETTTCCCCEE------EE----EETTCCEEEECSCCTTCEEEEEEEE
T ss_pred CCCeEEEEECCCCCCccEEEEEEEeCCCCCcceE------EE----CCCCccEEEECCCCCCCEEEEEEEE
Confidence 367899999877533 345677876643211100 00 1223445789999999999988753
No 162
>1fnf_A Fibronectin; RGD, extracellular matrix, cell adhesion protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1mfn_A 2mfn_A 2ck2_A
Probab=91.96 E-value=0.52 Score=45.07 Aligned_cols=72 Identities=14% Similarity=0.185 Sum_probs=45.7
Q ss_pred CCCeeEEEEecCCC-cEEEEEEeCCC--CCccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEEE
Q 012895 52 SDPQQVHISLAAKD-YIRVSWITDDK--EAESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYYY 128 (454)
Q Consensus 52 ~~p~~v~l~~~~~~-~~~v~W~t~~~--~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y 128 (454)
..|..+.+.....+ ++.|.|..... ...-.|+|....+......... ...-...+.|++|+|++.|.|
T Consensus 3 ~~P~~l~~~~~~~~~sv~l~W~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~---------~~~~~~~~~i~~L~p~t~Y~~ 73 (368)
T 1fnf_A 3 SPPTNLHLEANPDTGVLTVSWERSTTPDITGYRITTTPTNGQQGNSLEEV---------VHADQSSCTFDNLSPGLEYNV 73 (368)
T ss_dssp CCCEEEEEEECSSSSCEEEEEECCSCSSCCEEEEEEEETTTCSSCCEEEE---------ECTTCCEEECCCCCTTSCEEE
T ss_pred CCCcceEEEecCCCcEEEEEEeCCCCCCceEEEEEEEECCCCCCceeEEE---------ecCCcCEEEECCCCCCCEEEE
Confidence 46778888876654 69999998742 2345777776544211111100 112234578999999999999
Q ss_pred EeCc
Q 012895 129 RCGG 132 (454)
Q Consensus 129 rv~~ 132 (454)
||..
T Consensus 74 ~V~a 77 (368)
T 1fnf_A 74 SVYT 77 (368)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9964
No 163
>3csg_A MBP, maltose-binding protein monobody YS1 fusion, MMBP; engineered binding protein, antibody mimic, synthetic protein interface; 1.80A {Escherichia coli} PDB: 2obg_A 3csb_A* 3a3c_A* 3d4g_A* 3d4c_A* 3ef7_A*
Probab=91.88 E-value=0.31 Score=48.78 Aligned_cols=71 Identities=18% Similarity=0.256 Sum_probs=46.5
Q ss_pred CCCCeeEEEEecCCCcEEEEEEeCCC--CCccEEEEeecCCCC-ceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEE
Q 012895 51 ESDPQQVHISLAAKDYIRVSWITDDK--EAESVVEYGKLPGRY-NTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYY 127 (454)
Q Consensus 51 ~~~p~~v~l~~~~~~~~~v~W~t~~~--~~~~~v~y~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~ 127 (454)
-..|..+|+.-...++++|+|..+.. ...-.|+|....... .... . .+.-..+++|+||+|||.|.
T Consensus 370 l~~~~~l~~~~~~~~s~~l~W~~p~~~~~~~y~v~y~~~~~~~~~~~~-----~------~~~~~~~~~i~~L~p~t~Y~ 438 (461)
T 3csg_A 370 SSVPTNLEVVAATPTSLLISWDASYSSSVSYYRITYGETGGNSPVQEF-----T------VPGSKSTATISGLSPGVDYT 438 (461)
T ss_dssp CCSSCCCEEEEECSSCEEEECCCTTGGGCSEEEEEEEETTCCSCCEEE-----E------EETTCCEEEECSCCTTCEEE
T ss_pred cCCCcceEEeccCCCeEEEEecCCCCCcceEEEEEEEECCCCccceEE-----E------ecCCCceEEecCCCCCCEEE
Confidence 34677888888889999999987611 123466676654221 0110 0 11223568999999999999
Q ss_pred EEeCc
Q 012895 128 YRCGG 132 (454)
Q Consensus 128 Yrv~~ 132 (454)
.+|..
T Consensus 439 ~~v~a 443 (461)
T 3csg_A 439 ITVYA 443 (461)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99864
No 164
>1eer_B Epobp, erythropoietin receptor; signal transduction, hematopoietic cytokine, cytokine receptor class 1, complex (cytokine/receptor); 1.90A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1cn4_A 2jix_B 1eba_A* 1ern_A 1ebp_A
Probab=91.85 E-value=1 Score=40.16 Aligned_cols=71 Identities=14% Similarity=0.156 Sum_probs=45.9
Q ss_pred CCCCeeEEEEecC-CCcEEEEEEeCCCCC-----ccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCC
Q 012895 51 ESDPQQVHISLAA-KDYIRVSWITDDKEA-----ESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPAT 124 (454)
Q Consensus 51 ~~~p~~v~l~~~~-~~~~~v~W~t~~~~~-----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t 124 (454)
...|..+++...+ .+++.|.|..+.... .-.|+|....+..+.... . ...-...+.|.+|+||+
T Consensus 122 p~pP~~l~~~~~~~~~~l~v~W~~P~~~~~~~~l~Yev~y~~~~~~~w~~~~-~---------~~~~~~~~~l~~L~p~t 191 (227)
T 1eer_B 122 LDAPVGLVARLADESGHVVLRWLPPPETPMTSHIRYEVDVSAGQGAGSVQRV-E---------ILEGRTECVLSNLRGRT 191 (227)
T ss_dssp CCCCEEEEEEECSSTTCEEEEEECCSSCSCGGGEEEEEEEECCSSSCCCCEE-E---------ECTTCCEEEECCCCSSC
T ss_pred cCcCcceEEEEcCCCCeEEEEEcCCCCcccccceEEEEEEEcCCCCCcEEEE-E---------EecCceEEEEcccCCCC
Confidence 4578888888875 789999999875321 246667655432222110 0 01112356789999999
Q ss_pred EEEEEeC
Q 012895 125 TYYYRCG 131 (454)
Q Consensus 125 ~Y~Yrv~ 131 (454)
.|..||.
T Consensus 192 ~Y~vqVR 198 (227)
T 1eer_B 192 RYTFAVR 198 (227)
T ss_dssp EEEEEEE
T ss_pred eEEEEEE
Confidence 9999986
No 165
>1fnf_A Fibronectin; RGD, extracellular matrix, cell adhesion protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1mfn_A 2mfn_A 2ck2_A
Probab=91.72 E-value=1.3 Score=42.20 Aligned_cols=94 Identities=11% Similarity=0.021 Sum_probs=54.7
Q ss_pred CCCeeEEEEecCCCcEEEEEEeCCCC-CccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEEEEe
Q 012895 52 SDPQQVHISLAAKDYIRVSWITDDKE-AESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYYYRC 130 (454)
Q Consensus 52 ~~p~~v~l~~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Yrv 130 (454)
..|..+.+.....+++.|.|...... ..-.|+|............ . ...-.....|++|+|++.|.|+|
T Consensus 187 ~~P~~l~~~~~~~~sv~l~W~~p~~~i~~Y~v~~~~~~~~~~~~~~----~------~~~~~~~~~i~~L~p~t~Y~~~V 256 (368)
T 1fnf_A 187 DSPTGIDFSDITANSFTVHWIAPRATITGYRIRHHPEHFSGRPRED----R------VPHSRNSITLTNLTPGTEYVVSI 256 (368)
T ss_dssp CCCEEEEEESCCSSEEEEEEECCSSCCSEEEEEEECSCCSSCCEEE----E------EETTCCEEEEESCCTTCEEEEEE
T ss_pred CCCCccEEEEccCCEEEEEEeCCCCCcCEEEEEEecCCCCCCccEE----E------eCCCcCEEEECCCCCCCEEEEEE
Confidence 46777777766789999999886432 2346667655432111100 0 11123346788999999999999
Q ss_pred Ccc-------CceeEEECCCC-CCCeEEEEEec
Q 012895 131 GGR-------GPEFSFKMPPA-NFPIEFAIVGD 155 (454)
Q Consensus 131 ~~~-------s~~~~F~T~p~-~~~~~f~~igD 155 (454)
... .....+.|+|. ...+++..+++
T Consensus 257 ~A~n~~g~~~~~~~~~~t~p~~P~~l~~~~~~~ 289 (368)
T 1fnf_A 257 VALNGREESPLLIGQQSTVSDVPRDLEVVAATP 289 (368)
T ss_dssp EEEETTEECCCEEEEEECCCCSCEEEEEEEEET
T ss_pred EEEeCCccCCcccccccCCCCCCCeeEEEecCC
Confidence 641 12234667664 23344444443
No 166
>1x5i_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=91.57 E-value=0.28 Score=39.47 Aligned_cols=68 Identities=19% Similarity=0.284 Sum_probs=43.2
Q ss_pred CCCeeEEEEecCCCcEEEEEEeCCCCC----ccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEE
Q 012895 52 SDPQQVHISLAAKDYIRVSWITDDKEA----ESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYY 127 (454)
Q Consensus 52 ~~p~~v~l~~~~~~~~~v~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~ 127 (454)
..|..+++.... +++.|+|.-..... .-.|+|... ....... . ...-....+|++|+|+|.|.
T Consensus 29 ~~P~~l~~~~~~-~sv~l~W~~P~~~~g~i~~Y~v~y~~~-~~~~~~~-------~----~~~~~~~~~i~~L~p~t~Y~ 95 (126)
T 1x5i_A 29 EVPSSLHVRPLV-TSIVVSWTPPENQNIVVRGYAIGYGIG-SPHAQTI-------K----VDYKQRYYTIENLDPSSHYV 95 (126)
T ss_dssp CSCSEEEEEEET-TEEEEEEECCSCTTBCCCEEEEEECSS-CGGGEEE-------E----CCTTCCEEEECSCCSSCEEC
T ss_pred CCCCeeEEEecC-CEEEEEEcCCCCCCCCEeEEEEEEEcC-CCCceEE-------E----eCCCeeEEEEeCCCCCCEEE
Confidence 377888888775 89999999875331 235556531 1111100 0 12234557899999999999
Q ss_pred EEeCc
Q 012895 128 YRCGG 132 (454)
Q Consensus 128 Yrv~~ 132 (454)
++|..
T Consensus 96 ~~V~A 100 (126)
T 1x5i_A 96 ITLKA 100 (126)
T ss_dssp CEEEE
T ss_pred EEEEE
Confidence 99964
No 167
>3up1_A Interleukin-7 receptor subunit alpha; cytokine receptor, fibronectin type 3 fold, membrane and SOL glycosylation, immune system; HET: NAG FUC NGA; 2.15A {Homo sapiens} PDB: 3di3_B* 3di2_B*
Probab=91.47 E-value=0.95 Score=40.65 Aligned_cols=83 Identities=17% Similarity=0.214 Sum_probs=52.7
Q ss_pred CCCCeeEEEEecC-CCcEEEEEEeCCCC------CccEEEEeecCC-CCceEEEeEeEEEeeeeeecCeEEEEEECCCCC
Q 012895 51 ESDPQQVHISLAA-KDYIRVSWITDDKE------AESVVEYGKLPG-RYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEP 122 (454)
Q Consensus 51 ~~~p~~v~l~~~~-~~~~~v~W~t~~~~------~~~~v~y~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p 122 (454)
...|..+.|.... ...+.|.|..+..+ -.-.|+|..... ..+.... .......+.+.+|+|
T Consensus 113 PdPP~nLtv~~~~~~~~l~LsW~~P~~~~~~~~~L~YEVrYr~~~~~~~W~~v~-----------~~~t~~~i~l~~L~P 181 (223)
T 3up1_A 113 PEAPFDLSVVYREGANDFVVTFNTSHLQKKYVKVLMHDVAYRQEKDENKWTHVN-----------LSSTKLTLLQRKLQP 181 (223)
T ss_dssp CCCCEEEEEEEETTTTEEEEEEECGGGGCSSSCCEEEEEEEEESSCSSCCEEEE-----------ESSSEEEEEGGGSCT
T ss_pred cCCCcceEEEEEcCCCCEEEEECCCCCCCCcceeEEEEEEEEeCCCCCceEEEE-----------ecCceeEEeccccCC
Confidence 4467778887765 67799999988422 134566766532 2222211 111233456789999
Q ss_pred CCEEEEEeCc------------cCceeEEECCCC
Q 012895 123 ATTYYYRCGG------------RGPEFSFKMPPA 144 (454)
Q Consensus 123 ~t~Y~Yrv~~------------~s~~~~F~T~p~ 144 (454)
+|.|..||.. +|....|+|++.
T Consensus 182 gt~Y~vqVR~r~~~~~~G~WSeWS~~~~~~T~~~ 215 (223)
T 3up1_A 182 AAMYEIKVRSIPDHYFKGFWSEWSPSYYFRTPEI 215 (223)
T ss_dssp TCEEEEEEEEEECSSCCBCCCCCCCCEEEECCCC
T ss_pred CcEEEEEEEEeeCCCCCCCCCCCCCCeEEECCCC
Confidence 9999999852 356678999764
No 168
>3t1w_A Four-domain fibronectin fragment; human fibronectin, FN type-III domain, oncofetal splice VARI extra-domain B, EIIIB, ED-B, angiogenesis, integrin; 2.40A {Homo sapiens} PDB: 4gh7_B
Probab=91.16 E-value=0.98 Score=43.26 Aligned_cols=82 Identities=17% Similarity=0.196 Sum_probs=50.9
Q ss_pred CCeeEEEEecCCCcEEEEEEeCCC--CCccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEEEEe
Q 012895 53 DPQQVHISLAAKDYIRVSWITDDK--EAESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYYYRC 130 (454)
Q Consensus 53 ~p~~v~l~~~~~~~~~v~W~t~~~--~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Yrv 130 (454)
.|..+.+...+.+++.|.|..... ...-.|+|............ . ..+-.....|++|+|++.|.|+|
T Consensus 189 ~p~~l~~~~~~~~si~l~W~~p~~~~i~~Y~v~~~~~~~~~~~~~~------~----~~~~~~~~~i~~L~p~t~Y~~~V 258 (375)
T 3t1w_A 189 PPTDLRFTNIGPDTMRVTWAPPPSIDLTNFLVRYSPVKNEEDVAEL------S----ISPSDNAVVLTNLLPGTEYVVSV 258 (375)
T ss_dssp CCEEEEEESCCSSCEEEEEECCSSCCCCEEEEEEEEGGGTTCCEEE------E----ECTTCCEEEECSCCTTCEEEEEE
T ss_pred CCceeEEEecccCEEEEEEcCCCCCCccEEEEEEEeCCCCCCcEEE------E----cCCCcCEEEeCCCCCCCEEEEEE
Confidence 677777776778999999998632 23456777655422111100 0 11223456789999999999999
Q ss_pred Cc-------cCceeEEECCCC
Q 012895 131 GG-------RGPEFSFKMPPA 144 (454)
Q Consensus 131 ~~-------~s~~~~F~T~p~ 144 (454)
.. ......++|+|.
T Consensus 259 ~A~~~~g~s~~~~~~~~t~p~ 279 (375)
T 3t1w_A 259 SSVYEQHESTPLRGRQKTGLD 279 (375)
T ss_dssp EEEETTEECCCEEEEEECCCC
T ss_pred EEEcCCCcCCceeeEEecCCC
Confidence 63 122345667663
No 169
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Probab=90.94 E-value=0.65 Score=44.58 Aligned_cols=79 Identities=18% Similarity=0.283 Sum_probs=45.4
Q ss_pred eEEEEecCCCcEEEEEEeCCCCC----ccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEEEEeC
Q 012895 56 QVHISLAAKDYIRVSWITDDKEA----ESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYYYRCG 131 (454)
Q Consensus 56 ~v~l~~~~~~~~~v~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Yrv~ 131 (454)
.+.......+++.|.|.-..... .-.|+|.......+... .. ..+-.....|++|+|++.|.|||.
T Consensus 298 ~~~~~~~~~~~v~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~----~~------~~~~~~~~~i~~L~~~t~Y~~~V~ 367 (389)
T 2jll_A 298 SIHGQPSSGKSFKLSITKQDDGGAPILEYIVKYRSKDKEDQWLE----KK------VQGNKDHIILEHLQWTMGYEVQIT 367 (389)
T ss_dssp CEEEEEETTTEEEEEECCCCCCSSCCCEEEEEEEC-----CCBC----CE------ECTTCCEEEECSCCTTCEEEEEEE
T ss_pred ccccccCcCCEEEEEEECCCCCCCcccEEEEEEEeCCCCcceeE----ee------ccCCcceEEeCCcCCCCEEEEEEE
Confidence 35555556899999998654322 24566655322111100 00 122234567899999999999996
Q ss_pred c-------cCceeEEECCCC
Q 012895 132 G-------RGPEFSFKMPPA 144 (454)
Q Consensus 132 ~-------~s~~~~F~T~p~ 144 (454)
. ......|+|+|.
T Consensus 368 A~n~~G~s~~s~~~~~T~~~ 387 (389)
T 2jll_A 368 AANRLGYSEPTVYEFSMPPK 387 (389)
T ss_dssp EEC-CCBCCCEEEEEECCCC
T ss_pred EEcCCcCCCceeeEecCCCC
Confidence 3 123457888764
No 170
>2d9q_B Granulocyte colony-stimulating factor receptor; cytokine, ligand-receptor complex, signaling protein-cytokin; HET: NAG; 2.80A {Homo sapiens} SCOP: b.1.1.3 b.1.2.1 b.1.2.1
Probab=90.85 E-value=0.88 Score=42.62 Aligned_cols=83 Identities=11% Similarity=0.103 Sum_probs=50.8
Q ss_pred CCCCeeEEEEec------CCCcEEEEEEeCCCCC----ccEEEEe-ecCCCCceEEEeEeEEEeeeeeecCeEEEEEECC
Q 012895 51 ESDPQQVHISLA------AKDYIRVSWITDDKEA----ESVVEYG-KLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGP 119 (454)
Q Consensus 51 ~~~p~~v~l~~~------~~~~~~v~W~t~~~~~----~~~v~y~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g 119 (454)
...|..+.+... ..+++.|.|..+.... .-.|+|. ..+...+..+.. .....+.+.|.+
T Consensus 203 p~pP~~~~~~~~~~~~~~~~~~l~l~W~~p~~~~~~~l~Y~v~y~~~~~~~~w~~~~~----------~~~~~~~~~l~~ 272 (313)
T 2d9q_B 203 LEPPMLRTMDPSPEAAPPQAGCLQLSWEPWQPGLHINQKCELRHKPQRGEASWALVGP----------LPLEALQYELCG 272 (313)
T ss_dssp CCCCEEEECCC-------CCSCEEEEEECCGGGTTSCEEEEEEEEESSSCCCCEEEEE----------ECSCEEEEEECS
T ss_pred cCcCceeEEEEecccccCCCCeEEEEECCCCCCCceeEEEEEEEccCCCCCCcEEccc----------ccCcceEEEEeC
Confidence 345666665543 3578999999864221 3467776 443333322211 112346678999
Q ss_pred CCCCCEEEEEeCc-----------cCceeEEECCC
Q 012895 120 LEPATTYYYRCGG-----------RGPEFSFKMPP 143 (454)
Q Consensus 120 L~p~t~Y~Yrv~~-----------~s~~~~F~T~p 143 (454)
|+|+|.|.+||.. +|....|+|+.
T Consensus 273 L~p~t~Y~~rVra~~~~g~G~wS~wS~~~~~~T~~ 307 (313)
T 2d9q_B 273 LLPATAYTLQIRCIRWPLPGHWSDWSPSLELRTTE 307 (313)
T ss_dssp CCSCCCEEEEEEEEECSSCCCCCCCCCCEEECCCC
T ss_pred CCCCCeEEEEEEeeECCCCCccCCCCCccceeCCc
Confidence 9999999999862 24556777765
No 171
>1wj3_A KIAA1496 protein; beta sandwich, PANG, structural genomics, riken structural genomics/proteomics initiative, RSGI, neuropeptide; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=90.77 E-value=0.63 Score=36.88 Aligned_cols=79 Identities=10% Similarity=0.108 Sum_probs=46.3
Q ss_pred CCCCeeEEEEecCCCcEEEEEEeCC--CCC----ccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCC
Q 012895 51 ESDPQQVHISLAAKDYIRVSWITDD--KEA----ESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPAT 124 (454)
Q Consensus 51 ~~~p~~v~l~~~~~~~~~v~W~t~~--~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t 124 (454)
...|..+.+.. ..+++.|.|.-.. ... .-.|.|............ ... +.+.+. |+|++
T Consensus 19 ~~~P~~v~~~~-~~~si~l~W~~p~~~~~ng~i~gY~v~y~~~~~~~~~~~~-----------~~~--~~~~~~-L~~~t 83 (117)
T 1wj3_A 19 SQPPGNVVWNA-TDTKVLLNWEQVKAMENESEVTGYKVFYRTSSQNNVQVLN-----------TNK--TSAELV-LPIKE 83 (117)
T ss_dssp CCCCCSCBCCE-ETTEEEEECCCCCCCSSSCCEEEEEEEEEESSCSSCEEEE-----------ESS--SEEEEE-CCCSS
T ss_pred CCCCccEEEEE-eCCEEEEEEcCCCccccCCceeEEEEEEEECCCCCCeEEe-----------CCC--cEEEEE-CCCCC
Confidence 34566555555 5678999998772 121 234556654432221111 111 245566 99999
Q ss_pred EEEEEeCc--------cCceeEEECCCC
Q 012895 125 TYYYRCGG--------RGPEFSFKMPPA 144 (454)
Q Consensus 125 ~Y~Yrv~~--------~s~~~~F~T~p~ 144 (454)
.|.+||.. .++...|+|...
T Consensus 84 ~Y~~~V~A~n~~G~Gp~S~~v~~~T~~~ 111 (117)
T 1wj3_A 84 DYIIEVKATTDGGDGTSSEQIRIPRITS 111 (117)
T ss_dssp CEEEEEEEEESSCCCCBCCCEEECCCCC
T ss_pred EEEEEEEEECCCccCCCCCCEEEEcCCC
Confidence 99999963 255677888653
No 172
>3mtr_A N-CAM-1, NCAM-1, neural cell adhesion molecule 1; immunoglobulin domain, fibronectin type III repeat, CE adhesion; 1.80A {Homo sapiens}
Probab=89.73 E-value=1.1 Score=38.95 Aligned_cols=84 Identities=17% Similarity=0.152 Sum_probs=48.2
Q ss_pred CCeeEEEEecCCCcEEEEEEeCCCC-Cc----cEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEE
Q 012895 53 DPQQVHISLAAKDYIRVSWITDDKE-AE----SVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYY 127 (454)
Q Consensus 53 ~p~~v~l~~~~~~~~~v~W~t~~~~-~~----~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~ 127 (454)
.|..+.+. ....++.+.|...... .. -.|+|...+...+....-.. . .........|.+|+|++.|.
T Consensus 116 ~p~~~~~~-~~~~~~~l~w~~p~~~~~~pi~~y~v~~~~~~~~~w~~~~~~~---~----~~~~~~~l~i~~L~~~~~y~ 187 (215)
T 3mtr_A 116 SPSIDQVE-PYSSTAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYDA---K----EASMEGIVTIVGLKPETTYA 187 (215)
T ss_dssp CCEEEEEE-EETTEEEEEEECCSCCCSSCEEEEEEEEEETTCCCCEEEEEEH---H----HHHHHTEEEEECCCTTCEEE
T ss_pred CCcceEEE-EecceEEEEEecCCccCCCceEEEEEEEEECCCCccccccccc---c----cccccccEEECCCCCCCEEE
Confidence 45555443 2367889999855321 21 24677666543332221110 0 00011456789999999999
Q ss_pred EEeCc--------cCceeEEECCCC
Q 012895 128 YRCGG--------RGPEFSFKMPPA 144 (454)
Q Consensus 128 Yrv~~--------~s~~~~F~T~p~ 144 (454)
|||.. .+....|+|+|.
T Consensus 188 ~~~~A~N~~G~s~~S~~~~v~T~p~ 212 (215)
T 3mtr_A 188 VRLAALNGKGLGEISAASEFKTQPV 212 (215)
T ss_dssp EEEEEEESSCBCCCCCCEEEECCC-
T ss_pred EEEEEEeCCcccCcccceeeEeccc
Confidence 99953 356778999885
No 173
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=89.62 E-value=1.4 Score=45.58 Aligned_cols=68 Identities=15% Similarity=0.155 Sum_probs=47.3
Q ss_pred CCeeEEEEecCCCcEEEEEEeCCCC-C----ccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEE
Q 012895 53 DPQQVHISLAAKDYIRVSWITDDKE-A----ESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYY 127 (454)
Q Consensus 53 ~p~~v~l~~~~~~~~~v~W~t~~~~-~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~ 127 (454)
.|..+.+.-.+.++++++|..+... + .-.||+...++..|..+. .+ .. -..+++||.||+.|.
T Consensus 12 pP~~P~v~~~~~~sv~L~W~~P~~DGgs~I~~Y~vE~~~~~~~~W~~v~-~~---------~~--t~~~V~~L~~g~~Y~ 79 (573)
T 3uto_A 12 PPRFPIIENILDEAVILSWKPPALDGGSLVTNYTIEKREAMGGSWSPCA-KS---------RY--TYTTIEGLRAGKQYE 79 (573)
T ss_dssp CCEEEEEEEECSSCEEEEEECCSCCSSSCCCEEEEEEEESSSCCCEEEE-EE---------SS--SEEEECCCCTTCEEE
T ss_pred cCCCCEEEEeeCCEEEEEECCCCcCCCCcccEEEEEEEECCCCceEEec-cc---------cC--CEEEeCCCCCCCcEe
Confidence 4556667777789999999987422 2 246788877766665543 21 11 135689999999999
Q ss_pred EEeCc
Q 012895 128 YRCGG 132 (454)
Q Consensus 128 Yrv~~ 132 (454)
|||..
T Consensus 80 FRV~A 84 (573)
T 3uto_A 80 FRIIA 84 (573)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99963
No 174
>3flo_A DNA polymerase alpha subunit B; protein-protein complex, phosphoesterase fold, OB fold, zinc motif, DNA replication, nucleus; HET: DNA; 2.50A {Saccharomyces cerevisiae}
Probab=89.12 E-value=0.62 Score=46.43 Aligned_cols=74 Identities=7% Similarity=0.062 Sum_probs=49.5
Q ss_pred CCeEEEEEecCCCCCCh------HHHHHHhhcC-CCCeEeecCccccCCCC----------------hhhHHHHh-hhh-
Q 012895 146 FPIEFAIVGDLGQTEWT------NSTLDHVGSK-DYDVFLLPGDLSYADFQ----------------QPLWDSFG-RLV- 200 (454)
Q Consensus 146 ~~~~f~~igD~~~~~~~------~~~l~~i~~~-~pd~vl~~GDl~y~~~~----------------~~~~~~~~-~~~- 200 (454)
.++++++.+......++ .+.++.++.. +||.+|++|.+++.... ...++.++ ..+
T Consensus 146 ~~l~ivvAsGPyT~sdnl~yepL~~Ll~~v~~~~kPdvLIL~GPFvD~~hp~i~~G~~p~~~~~~~~~~t~~~lF~~~i~ 225 (460)
T 3flo_A 146 SSLKVIVTCGPYFANDNFSLELLQEFIDSINNEVKPHVLIMFGPFIDITHPLIASGKLPNFPQFKTQPKTLDELFLKLFT 225 (460)
T ss_dssp SCEEEEEEESCCSCSSCCCCHHHHHHHHHCCCCCCCSEEEEESCSSBTTCHHHHHTCCCCCTTCSSCCSSHHHHHHHHTH
T ss_pred CCcEEEEEeCCccCCCccChHHHHHHHHHHHhccCCCEEEEecCcccccCcccccCcccccccccccccCHHHHHHHHHH
Confidence 67999999987654432 3566666664 89999999999976531 12333333 232
Q ss_pred ---hhhhcCCCeeecCCCcccC
Q 012895 201 ---EPYASSRPWMVTEGNHEIE 219 (454)
Q Consensus 201 ---~~l~~~~P~~~v~GNHD~~ 219 (454)
+.+...+.++.+||+||..
T Consensus 226 ~il~~l~~~t~VVlVPS~rD~~ 247 (460)
T 3flo_A 226 PILKTISPHIQTVLIPSTKDAI 247 (460)
T ss_dssp HHHTTSCTTSEEEEECCTTBTT
T ss_pred HHHHhccCCCEEEEeCCccccc
Confidence 3333346699999999995
No 175
>1oww_A FN, fibronectin first type III module, CIG; fibronectin type III module, structural protein; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=89.05 E-value=2 Score=32.47 Aligned_cols=79 Identities=18% Similarity=0.272 Sum_probs=46.7
Q ss_pred CCCeeEEEEecC--CCcEEEEEEeCCCC--CccEEEEeecCCC-CceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEE
Q 012895 52 SDPQQVHISLAA--KDYIRVSWITDDKE--AESVVEYGKLPGR-YNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTY 126 (454)
Q Consensus 52 ~~p~~v~l~~~~--~~~~~v~W~t~~~~--~~~~v~y~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y 126 (454)
.-|.|+.++-.. .++--|.|..+..+ ..-.+.|...... .+..+. -++....-+|+||+||..|
T Consensus 6 ~gpa~v~is~~~s~pdsh~iqW~~~s~s~I~eyiL~~R~k~~~g~Wke~~-----------Ip~h~nSYtI~GL~P~~~Y 74 (98)
T 1oww_A 6 SGPVEVFITETPSQPNSHPIQWNAPQPSHISKYILRWRPKNSVGRWKEAT-----------IPGHLNSYTIKGLKPGVVY 74 (98)
T ss_dssp CCCCEEECCCCSSCTTCEEEEEECCSSSCEEEEEEEEEETTCSSCCEEEE-----------ECSSCCEEEECSCCSSEEE
T ss_pred CcceEEEecCCCCCCCccceEEecCCCCCceEEEEEEEEcCCCCceeEEE-----------ecCccceEEEecCCCCcEE
Confidence 345566665544 67888899888532 2334445544332 122221 2334555679999999999
Q ss_pred EEEeCc-----cC--ceeEEEC
Q 012895 127 YYRCGG-----RG--PEFSFKM 141 (454)
Q Consensus 127 ~Yrv~~-----~s--~~~~F~T 141 (454)
.-+|-+ ++ ..|.|.|
T Consensus 75 E~qv~S~~ryG~~Evs~f~FtT 96 (98)
T 1oww_A 75 EGQLISIQQYGHQEVTRFDFTT 96 (98)
T ss_dssp EEEEEEEESSSCEEEEEEEEEE
T ss_pred EEEEEEeeccCcccceEEEEEe
Confidence 998853 11 2566765
No 176
>3f7q_A Integrin beta-4, GP150; hemidesmosome, cell adhesion, carcinoma, epidermolysis bullosa, alternative splicing, disease mutation, glycoprotein; HET: 1PE PG4; 1.75A {Homo sapiens} PDB: 3f7r_A 3f7p_C 1qg3_A
Probab=88.37 E-value=0.49 Score=42.30 Aligned_cols=76 Identities=17% Similarity=0.305 Sum_probs=45.6
Q ss_pred CCCeeEEEEecCCCcEEEEEEeCCCC----CccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEE
Q 012895 52 SDPQQVHISLAAKDYIRVSWITDDKE----AESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYY 127 (454)
Q Consensus 52 ~~p~~v~l~~~~~~~~~v~W~t~~~~----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~ 127 (454)
..|..+++...+.+++.|.|.-.... ..-.|+|.......... +...... ..........|++|+|++.|.
T Consensus 100 ~~P~~l~~~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~--~~~~~~~---~~~~~~~~~~i~~L~p~t~Y~ 174 (234)
T 3f7q_A 100 SEPGRLAFNVVSSTVTQLSWAEPAETNGEITAYEVCYGLVNDDNRPI--GPMKKVL---VDNPKNRMLLIENLRESQPYR 174 (234)
T ss_dssp CCCCCCEEEECSSSCEEEECCCCSCCSSCCCEEEEEEEEBCTTSCBS--SCCEECC---CSCTTCCEEEEECCCTTCCEE
T ss_pred CCCCccEEEEecCCEEEEEEcCCCCCCCceeEEEEEEEECCCCCCcc--CcceEEE---ecCCcceEEEeCCCCCCCeEE
Confidence 34777888877789999999876432 12366676554322110 0000000 011223456789999999999
Q ss_pred EEeCc
Q 012895 128 YRCGG 132 (454)
Q Consensus 128 Yrv~~ 132 (454)
++|..
T Consensus 175 ~~V~A 179 (234)
T 3f7q_A 175 YTVKA 179 (234)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99963
No 177
>2q7n_A Leukemia inhibitory factor receptor; cytokine cell surface receptor complex LIFR LIF, cytokine RE cytokine complex; HET: NAG FUC MAN; 4.00A {Mus musculus}
Probab=87.66 E-value=0.97 Score=45.75 Aligned_cols=87 Identities=17% Similarity=0.224 Sum_probs=53.5
Q ss_pred CCCCeeEEEEecCCCcEEEEEEeCCCCC----ccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEE
Q 012895 51 ESDPQQVHISLAAKDYIRVSWITDDKEA----ESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTY 126 (454)
Q Consensus 51 ~~~p~~v~l~~~~~~~~~v~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y 126 (454)
...|..+++.....+++.|.|..+.... .-.|+|.......+.. .. ... ....-.+.+.|.+|+|+|.|
T Consensus 387 P~PP~nl~v~~~s~~sl~LsW~pP~~~~g~~l~YeV~Yr~~~~~~w~~-~~---~~~---~~~~~~~~v~l~~L~P~T~Y 459 (488)
T 2q7n_A 387 PHDPTSLKVKDINSTVVTFSWYLPGNFTKINLLCQIEICKANSKKEVR-NA---TIR---GAEDSTYHVAVDKLNPYTAY 459 (488)
T ss_dssp CCCCEEEEEEECSTTCEEEEEEEEEECSSSEEEEEEEEBCTTSCCEEE-EE---EEE---CCEEEEEEEEECSCCSSCCB
T ss_pred CCCCeEEEEEecCCCEEEEEEeCCCCCCCcceEEEEEEEECCCCCceE-EE---EEe---cCCCcEEEEEeCCCCCCceE
Confidence 4567888887767889999999875322 2346666554322211 00 000 00113456789999999999
Q ss_pred EEEeCc----------cCceeEEECCCC
Q 012895 127 YYRCGG----------RGPEFSFKMPPA 144 (454)
Q Consensus 127 ~Yrv~~----------~s~~~~F~T~p~ 144 (454)
.+||.. +|+...|+|+++
T Consensus 460 ~~rVRA~~~g~G~WS~WS~~v~~~T~e~ 487 (488)
T 2q7n_A 460 TFRVRCSSKTFWKWSRWSDEKRHLTTEA 487 (488)
T ss_dssp BCCEEEEESSCSSCCCCCCCCCBCCCCC
T ss_pred EEEEEEEECCCCCCCCCcCCEeEECCCC
Confidence 999852 345567888763
No 178
>3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A* 2x11_A 3mx0_A* 3mbw_A*
Probab=87.59 E-value=2.7 Score=42.98 Aligned_cols=108 Identities=14% Similarity=0.186 Sum_probs=57.2
Q ss_pred cccCCCCCccccCCCCCCCCCeeEEEEecCCCcEEEEEEeCCCCC-----ccEEEEeecCCCCc-eEEEeEeEEEeeeee
Q 012895 34 YIRQPPRSVIQTPNKRSESDPQQVHISLAAKDYIRVSWITDDKEA-----ESVVEYGKLPGRYN-TVATGEHTSYQFFFY 107 (454)
Q Consensus 34 ~~r~~~~~~~~~~~~~~~~~p~~v~l~~~~~~~~~v~W~t~~~~~-----~~~v~y~~~~~~~~-~~~~~~~~~~~~~~~ 107 (454)
+.|.. .....++-.....+|..+. .....+++.|.|.-+.... .-.|+|........ ....+....+... .
T Consensus 318 ~~ra~-~d~~~~~ct~pPsaP~nl~-~~vs~tSv~LsW~pP~~~gG~~i~~Y~V~~~~~~~~~~~~~~c~~~~~~~~~-~ 394 (536)
T 3fl7_A 318 FFRAP-QDPASMPCTRPPSAPHYLT-AVGMGAKVELRWTPPQDSGGREDIVYSVTCEQCWPESGECGPCEASVRYSEP-P 394 (536)
T ss_dssp CBCCT-TCCTTSCCBCCCCCBSCEE-EECCTTSEEEEECCBSCCCSCSCCEEEEEEEEECC-CCCEEECCTTCEESSC-S
T ss_pred ccccC-CCccccccccCCCcccceE-EEecCCEEEEEEeCCcCCCCCceeEEEEEEEeccCCCCcccccCCCceEEEe-e
Confidence 44544 3333444445667787774 4455889999998765322 23555654321100 0000000111100 0
Q ss_pred ecCeEEEEEECCCCCCCEEEEEeCc-----------cCceeEEECCCC
Q 012895 108 KSGKIHHVKIGPLEPATTYYYRCGG-----------RGPEFSFKMPPA 144 (454)
Q Consensus 108 ~~~~~~~~~l~gL~p~t~Y~Yrv~~-----------~s~~~~F~T~p~ 144 (454)
...-...++|++|+|+|.|.+||.. .+....++|+|.
T Consensus 395 ~~~~~ts~tI~gL~P~T~Y~frV~A~N~~G~~sps~~s~~v~v~T~~~ 442 (536)
T 3fl7_A 395 HGLTRTSVTVSDLEPHMNYTFTVEARNGVSGLVTSRSFRTASVSINQT 442 (536)
T ss_dssp SSBCSSEEEEECCCTTCEEEEEEEEECTTGGGCSCCCEEEEEEECCSC
T ss_pred cCCccceeEeCCCCCCCEEEEEEEEEecCCCCCCCCccceeEEeeccc
Confidence 1122456789999999999999953 123456788664
No 179
>1axi_B HGHBP, growth hormone receptor; complex (hormone-receptor), complex (hormone-receptor) compl; 2.10A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1a22_B 1kf9_B 1hwg_B 1hwh_B 3hhr_B 2aew_A
Probab=86.87 E-value=0.97 Score=40.75 Aligned_cols=80 Identities=15% Similarity=0.178 Sum_probs=47.1
Q ss_pred CCCCeeEEEEecC--C----CcEEEEEEeCCCC--------CccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEE
Q 012895 51 ESDPQQVHISLAA--K----DYIRVSWITDDKE--------AESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVK 116 (454)
Q Consensus 51 ~~~p~~v~l~~~~--~----~~~~v~W~t~~~~--------~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 116 (454)
...|..+.++... . ..+.|.|..+... -.-.|+|.......+.... ......+.
T Consensus 131 p~pP~~l~~~~~~~s~~~~~~~l~lsW~~P~~~~~~~g~~~l~Yevry~~~~~~~w~~~~------------~~~~~~~~ 198 (236)
T 1axi_B 131 PDPPIALNWTLLNVSLTGIHADIQVRWEAPRNADIQKGWMVLEYELQYKEVNETKWKMMD------------PILTTSVP 198 (236)
T ss_dssp CCCCEEEEEEECSCCSSCSEEEEEEEEECCTTSCTTTTSCCEEEEEEEEETTCSSCEECC------------CBSSSEEE
T ss_pred cCCCcccEEEEEecccCCCCceEEEEECCCCCccccCCceeeEEEEEEEECCCCceEEEe------------ccCCCEEE
Confidence 4467777655433 2 3489999988532 1235666655432222111 01124567
Q ss_pred ECCCCCCCEEEEEeCc----------cCceeEEECC
Q 012895 117 IGPLEPATTYYYRCGG----------RGPEFSFKMP 142 (454)
Q Consensus 117 l~gL~p~t~Y~Yrv~~----------~s~~~~F~T~ 142 (454)
|.+|+||+.|..||.. +|....|+||
T Consensus 199 l~~L~p~t~Y~vqVRa~~~~gg~ws~WS~~~~~~~p 234 (236)
T 1axi_B 199 VYSLKVDKEYEVRVRSKQRNSGNYGEFSEVLYVTLP 234 (236)
T ss_dssp EEEEETTSCEEEEEEEEETTSSCCCCCCCCEEECCC
T ss_pred EeccCCCCEEEEEEEEEECCCCCcCCCCCCEEEECC
Confidence 8899999999999963 2455667665
No 180
>2ha1_A Fibronectin; beta sandwich, protein-protein complex, rigid BODY docking, cell adhesion, structural protein; NMR {Homo sapiens}
Probab=86.79 E-value=0.82 Score=39.57 Aligned_cols=66 Identities=17% Similarity=0.174 Sum_probs=38.7
Q ss_pred EEEEecCCCcEEEEEEeCCCC-CccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEEEEeCc
Q 012895 57 VHISLAAKDYIRVSWITDDKE-AESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYYYRCGG 132 (454)
Q Consensus 57 v~l~~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Yrv~~ 132 (454)
+.+.....+++.|.|.-.... ..-.|+|........... .. ..+-...+.|+||+|++.|.++|..
T Consensus 118 l~~~~~~~~sv~l~W~~p~~~i~~Y~v~~~~~~~~~~~~~------~~----v~~~~~~~~i~~L~p~t~Y~~~V~A 184 (201)
T 2ha1_A 118 ESVTEITASSFVVSWVSASDTVSGFRVEYELSEEGDEPQY------LD----LPSTATSVNIPDLLPGRKYIVNVYQ 184 (201)
T ss_dssp SSCCCCCSCCEEEECCCSCTTEEEEEEEEEETTTCCCCEE------EE----EETTCCEEEECSCCTTCEEEEEEEE
T ss_pred eEEEecCCCeEEEEEeCCCCCccEEEEEEEECCCCCceeE------EE----cCCceeEEEeCCCCCCCEEEEEEEE
Confidence 344444578999999776432 223566764322111100 00 1122345789999999999999864
No 181
>1zlg_A Anosmin 1; insulin-like growth factor receptor Cys-rich fold, WHEY acidic protein fold, fibronectin type III fold, hormone- growth factor complex; NMR {Homo sapiens}
Probab=86.19 E-value=3 Score=43.85 Aligned_cols=78 Identities=13% Similarity=0.224 Sum_probs=44.3
Q ss_pred CCCCCeeEEEEec--CCC---cEEEEEEeCCCCC----ccEEEEeec-CCCCceEEEeEeEEEeeeeeecCeEEEEEECC
Q 012895 50 SESDPQQVHISLA--AKD---YIRVSWITDDKEA----ESVVEYGKL-PGRYNTVATGEHTSYQFFFYKSGKIHHVKIGP 119 (454)
Q Consensus 50 ~~~~p~~v~l~~~--~~~---~~~v~W~t~~~~~----~~~v~y~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g 119 (454)
....|..+.+... ..+ ++.|.|.-+.... .-.|+|... ....... ........ ..+-...++|++
T Consensus 266 pp~~P~~l~~~~~~~~~~g~~sv~l~W~pP~~~~g~i~~Y~V~~~~~~~~~~~~~-~~~~~~~~----v~~~~~~~~l~~ 340 (680)
T 1zlg_A 266 APPAPANLRLANSTVNSDGSVTVTIVWDLPEEPDIPVHHYKVFWSWMVSSKSLVP-TKKKRRKT----TDGFQNSVILEK 340 (680)
T ss_pred CCCCCCceEeeeeeecCCCceEEEEEecCCCCCCCceeEEEEEEEecccccccCC-ccceEEEE----EcCCeeEEEeCC
Confidence 4557788888776 566 9999999654222 234556521 1000000 00000000 123346688999
Q ss_pred CCCCCEEEEEeCc
Q 012895 120 LEPATTYYYRCGG 132 (454)
Q Consensus 120 L~p~t~Y~Yrv~~ 132 (454)
|+|+|.|.+||..
T Consensus 341 L~p~t~Y~~~V~A 353 (680)
T 1zlg_A 341 LQPDCDYVVELQA 353 (680)
T ss_pred CCCCCEEEEEEEE
Confidence 9999999999963
No 182
>3v6o_A Leptin receptor; receptor-antibody complex, cytokine receptor, antibody FAB F immunoglobulin fold; HET: NAG; 1.95A {Homo sapiens}
Probab=86.06 E-value=1.8 Score=37.87 Aligned_cols=72 Identities=13% Similarity=0.128 Sum_probs=39.6
Q ss_pred CCCCeeEEEEec-CCCcEEEEEEeCCCCC---ccEEEEeecCC-CCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCE
Q 012895 51 ESDPQQVHISLA-AKDYIRVSWITDDKEA---ESVVEYGKLPG-RYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATT 125 (454)
Q Consensus 51 ~~~p~~v~l~~~-~~~~~~v~W~t~~~~~---~~~v~y~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~ 125 (454)
...|..+++... ..+.+.|.|..+..+. .-.|+|..... ..+..... ...-...+.|.+|+|||.
T Consensus 110 p~pP~~l~v~~~~~~~~l~l~W~~P~~~~~~l~yev~y~~~~~~~~w~~~~~----------~~~~~~~~~l~~L~p~t~ 179 (206)
T 3v6o_A 110 PLPPSSVKAEITINIGLLKISWEKPVFPENNLQFQIRYGLSGKEVQWKMYEV----------YDAKSKSVSLPVPDLCAV 179 (206)
T ss_dssp CCCCCSCEEEEETTTTEEEEEC--------CEEEEEEEEESSSSCCCEEEEE----------CC---CEEEECCSCTTSC
T ss_pred CCCCCceEeEEecCCCeEEEEECCCCCCCCcEEEEEEEEECCCCCceEEEec----------ccCcceeEEeecCCCCCE
Confidence 345666677665 4789999999875321 34566765542 12222111 011123577899999999
Q ss_pred EEEEeCc
Q 012895 126 YYYRCGG 132 (454)
Q Consensus 126 Y~Yrv~~ 132 (454)
|..||..
T Consensus 180 Y~vqVRa 186 (206)
T 3v6o_A 180 YAVQVRC 186 (206)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 9999864
No 183
>3tgx_A Interleukin-21 receptor; class I cytokine, class I cytokine receptor, sugarbridge, fibronectine domain, signaling, cytokine-cytokine receptor; HET: MAN FUL NAG BMA FUC; 2.80A {Homo sapiens}
Probab=85.55 E-value=2.7 Score=37.32 Aligned_cols=85 Identities=11% Similarity=0.166 Sum_probs=51.8
Q ss_pred CCCCeeEEEEecCCCcEEEEEEeCCCC---------CccEEEEeecCCCCceEE-EeEeEEEeeeeeecCeEEEEEECCC
Q 012895 51 ESDPQQVHISLAAKDYIRVSWITDDKE---------AESVVEYGKLPGRYNTVA-TGEHTSYQFFFYKSGKIHHVKIGPL 120 (454)
Q Consensus 51 ~~~p~~v~l~~~~~~~~~v~W~t~~~~---------~~~~v~y~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~gL 120 (454)
...|..+.+.. .+.+.|.|..+... -.-.|+|..... .+..+ .... . ........+.+.+|
T Consensus 101 p~PP~nltv~~--~~~l~lsW~~P~~~p~~~~~~~~L~Yevryr~~~~-~W~~~~~~~~--~----~~~~~~~~~~~~~L 171 (219)
T 3tgx_A 101 PAPPFDVTVTF--SGQYQISWRSDYEDPAFYMLKGKLQYELQYRNRGD-PWAVSPRRKL--I----SVDSRSVSLLPLEF 171 (219)
T ss_dssp CCCCEEEEEEE--SSSEEEEEECGGGSGGGGGGTTSEEEEEEEEETTS-CTTSCCEEEE--E----CSSCSEEEECTTSS
T ss_pred eCCCCceEEEe--CCCEEEEEeCCcCCccccccccCEEEEEEEecCCC-Cceeccccee--E----ecCCCEEEEEeccC
Confidence 34566666763 46899999987431 134577776653 22111 1110 0 01234556778899
Q ss_pred CCCCEEEEEeCc--------------cCceeEEECCCC
Q 012895 121 EPATTYYYRCGG--------------RGPEFSFKMPPA 144 (454)
Q Consensus 121 ~p~t~Y~Yrv~~--------------~s~~~~F~T~p~ 144 (454)
.||+.|..||.. +|....|+|+++
T Consensus 172 ~p~t~Y~vqVRa~~~~g~~~~G~WSeWS~~~~~~T~~~ 209 (219)
T 3tgx_A 172 RKDSSYELQVRAGPMPGSSYQGTWSEWSDPVIFQTQSE 209 (219)
T ss_dssp CSSCEEEEEEEEEECTTSSCCBCCCCCCCCEEEECCC-
T ss_pred CCCCEEEEEEEEeeCCCCCCCCcCcCCCCCeEEECCch
Confidence 999999999842 256788999875
No 184
>2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase, glycoprotein, receptor protei tyrosine phosphatase, cell adhesion; HET: NAG; 3.10A {Homo sapiens}
Probab=85.35 E-value=2.5 Score=44.81 Aligned_cols=88 Identities=15% Similarity=0.144 Sum_probs=55.0
Q ss_pred CCCCCeeEEEEecCCCcEEEEEEeCCCC------CccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCC
Q 012895 50 SESDPQQVHISLAAKDYIRVSWITDDKE------AESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPA 123 (454)
Q Consensus 50 ~~~~p~~v~l~~~~~~~~~v~W~t~~~~------~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~ 123 (454)
....|..+.+.....+++.|.|.-.... ..-.|+|.......+...... ... ...-...+.|++|+|+
T Consensus 359 p~~~P~~~~~~~~~~~sv~l~W~~p~~~~~~~~~~~y~v~y~~~~~~~~~~~~~~--~~~----~~~~~~~~~i~~L~p~ 432 (731)
T 2v5y_A 359 PMRGPRKLEVVEVKSRQITIRWEPFGYNVTRCHSYNLTVHYCYQVGGQEQVREEV--SWD----TENSHPQHTITNLSPY 432 (731)
T ss_dssp CSCCCEEEEEEEECSSCEEEEEECCCHHHHCSSSCEEEEEEEEESSSSEEEEEEE--ECC----SSCSSCEEEECSCCSS
T ss_pred CCCCCceeEEEeccCCeEEEEEECCCcccccceeeeEEEEEEEccCCCCccceeE--EEE----ecCCcceEEECCCCCC
Confidence 3467888888877889999999886321 134577776543221111100 001 1223445789999999
Q ss_pred CEEEEEeCc-------cCceeEEECCC
Q 012895 124 TTYYYRCGG-------RGPEFSFKMPP 143 (454)
Q Consensus 124 t~Y~Yrv~~-------~s~~~~F~T~p 143 (454)
|.|.+||.. .+....++|++
T Consensus 433 t~Y~~~V~A~n~~G~s~S~~~~~~T~~ 459 (731)
T 2v5y_A 433 TNVSVKLILMNPEGRKESQELIVQTDE 459 (731)
T ss_dssp CEEEEEEEEECSSCEEECCCEEEECCC
T ss_pred CEEEEEEEEEcCCCCCCCceEEEEccC
Confidence 999999863 24566788754
No 185
>3l5i_A Interleukin-6 receptor subunit beta; cytokine receptor, fibronectin type III domain, alternative cell membrane, disulfide bond; 1.90A {Homo sapiens} PDB: 3l5j_A
Probab=85.33 E-value=4.2 Score=37.04 Aligned_cols=73 Identities=12% Similarity=0.166 Sum_probs=43.1
Q ss_pred CCCeeEEEEecCCCcEEEEEEeCCC-CCccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEEEEe
Q 012895 52 SDPQQVHISLAAKDYIRVSWITDDK-EAESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYYYRC 130 (454)
Q Consensus 52 ~~p~~v~l~~~~~~~~~v~W~t~~~-~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Yrv 130 (454)
..|..+++...+ +++.|+|.-... ...-.|+|........... .+.. ....-.....+++|+|++.|.+||
T Consensus 103 ~p~~~~~~~~~~-~si~l~W~~p~~~i~~Y~v~~~~~~~~~~~~~-----~~~~--~~~~~~~~~~~~~L~p~t~Y~~~V 174 (290)
T 3l5i_A 103 HPVMDLKAFPKD-NMLWVEWTTPRESVKKYILEWCVLSDKAPCIT-----DWQQ--EDGTVHRTYLRGNLAESKCYLITV 174 (290)
T ss_dssp CCCEEEEEEEET-TEEEEEEECCSSCCCEEEEEEEEECSSSCCCC-----EEEE--EETTCSEEECCSCCCTTCEEEEEE
T ss_pred CccceeEEEeCC-CeEEEEEeCCCCCCCcEEEEEEECCCCCCCCc-----CeEE--ccCCCcceEEecCcCCccEEEEEE
Confidence 344556655544 699999998754 2345677776544311000 0000 012234456789999999999999
Q ss_pred Cc
Q 012895 131 GG 132 (454)
Q Consensus 131 ~~ 132 (454)
..
T Consensus 175 ~A 176 (290)
T 3l5i_A 175 TP 176 (290)
T ss_dssp EE
T ss_pred EE
Confidence 63
No 186
>1bqu_A Protein (GP130); cytokine receptor, glycoprotein 130, interleukine 6 R beta subunit, signaling protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1pvh_A 1bj8_A
Probab=84.99 E-value=1.8 Score=37.74 Aligned_cols=71 Identities=6% Similarity=0.042 Sum_probs=44.1
Q ss_pred CCCCeeEEEEecCCCcEEEEEEeCCCCC---ccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCC-CCCCEE
Q 012895 51 ESDPQQVHISLAAKDYIRVSWITDDKEA---ESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPL-EPATTY 126 (454)
Q Consensus 51 ~~~p~~v~l~~~~~~~~~v~W~t~~~~~---~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL-~p~t~Y 126 (454)
...|..+.+...+.+++.++|....... .-.|+|........ .+. ....-...+.|.+| .|++.|
T Consensus 8 P~~P~~l~~~~~~~~sv~l~W~~p~~~~~~~~Y~v~~~~~~~~~~-----~~~------~~~~~~~~~~i~~L~~~~t~Y 76 (215)
T 1bqu_A 8 PEKPKNLSCIVNEGKKMRCEWDGGRETHLETNFTLKSEWATHKFA-----DCK------AKRDTPTSCTVDYSTVYFVNI 76 (215)
T ss_dssp CCCCEEEEEEEETTSCCEEEEECCSCCSSCCEEEEEEEETTEECC-----CEE------CCSSCTTEEECSSCCCTTSCE
T ss_pred CCCCEeeEeEECCCCcEEEEcCCCCCCCCCceEEEEEEEcCCCcc-----ccc------cccCCcceEEEcCCccccccE
Confidence 4567777777666789999999875432 33555544321100 000 01222356789999 999999
Q ss_pred EEEeCc
Q 012895 127 YYRCGG 132 (454)
Q Consensus 127 ~Yrv~~ 132 (454)
.+||..
T Consensus 77 ~~~V~A 82 (215)
T 1bqu_A 77 EVWVEA 82 (215)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 999964
No 187
>3lqm_A Interleukin-10 receptor subunit beta; IL-10R2, common chain, cytokine, IL-10, IL-22, IL- 28, IL-29, disulfide bond, glycoprotein, membrane; 2.14A {Homo sapiens}
Probab=84.38 E-value=3.8 Score=35.66 Aligned_cols=77 Identities=18% Similarity=0.202 Sum_probs=45.4
Q ss_pred CeeEEEEecCCCcEEEEEEeCCCC--------------CccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECC
Q 012895 54 PQQVHISLAAKDYIRVSWITDDKE--------------AESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGP 119 (454)
Q Consensus 54 p~~v~l~~~~~~~~~v~W~t~~~~--------------~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g 119 (454)
|-.|++... .+++.|.|..+..+ -.-.|.|...+......... . ...+.|.+
T Consensus 96 PP~v~~~~~-~~si~v~w~~P~~~~~~~~~~~~~~~~~l~Y~v~y~~~~~~~~~~~~~----------~---~~~~~l~~ 161 (201)
T 3lqm_A 96 PPGMQVEVL-ADCLHMRFLAPKIENEYETWTMKNVYNSWTYNVQYWKQGTDEKFQITP----------Q---YDFEVLRN 161 (201)
T ss_dssp CCEEEEEEE-TTEEEEEEECCEEECSSCEEEHHHHCTTCEEEEEEEETTCCCCEEECC----------S---SSEEEECS
T ss_pred CCEEEEEEe-CCEEEEEEcCCCccCCCcccCHHHhCCceEEEEEEEECCCCcEEEEEe----------c---CceEEEec
Confidence 335776433 67999999876411 12345565543322211110 1 12478999
Q ss_pred CCCCCEEEEEeCc----------cCceeEEECCCC
Q 012895 120 LEPATTYYYRCGG----------RGPEFSFKMPPA 144 (454)
Q Consensus 120 L~p~t~Y~Yrv~~----------~s~~~~F~T~p~ 144 (454)
|+|+|.|..+|.. .|+...|+|.+.
T Consensus 162 L~p~t~Ycv~V~a~~~~~~~~g~~S~~~c~~T~~~ 196 (201)
T 3lqm_A 162 LEPWTTYCVQVRGFLPDRNKAGEWSEPVCEQTTHD 196 (201)
T ss_dssp CCTTCEEEEEEEEEETTTTEECCCCCCEEEECCCG
T ss_pred CCCCCcEEEEEEEEeccCCCCCCcCCCEeEEeCCC
Confidence 9999999999853 245566777653
No 188
>1iar_B Protein (interleukin-4 receptor alpha chain); cytokine receptor,interleukin-4, cytokine/receptor complex; 2.30A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 3bpl_B* 3bpn_B* 3bpo_B*
Probab=84.36 E-value=3.8 Score=35.83 Aligned_cols=86 Identities=9% Similarity=0.066 Sum_probs=43.7
Q ss_pred CCCCeeEEEEecCCCcEEEEEEeCCCC-------CccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCC
Q 012895 51 ESDPQQVHISLAAKDYIRVSWITDDKE-------AESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPA 123 (454)
Q Consensus 51 ~~~p~~v~l~~~~~~~~~v~W~t~~~~-------~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~ 123 (454)
...|..+.+....+....|.|..+... -.-.|+|....+..... .... ........+.+.+|.||
T Consensus 98 p~PP~nl~~~~~~~~~l~l~W~~p~~~~~~~~~~L~yev~y~~~~~~~~~~-~~~~-------~~~~~~~~~~~~~L~p~ 169 (207)
T 1iar_B 98 PRAPGNLTVHTNVSDTLLLTWSNPYPPDNYLYNHLTYAVNIWSENDPADFR-IYNV-------TYLEPSLRIAASTLKSG 169 (207)
T ss_dssp CCCCEEEEEC----CCEEEEEECSSCTTSTTGGGCEEEEEEEESSSCSCEE-EEEE-------CSSCCEEEECC-----C
T ss_pred cCCCCCeEEEEccCCCEEEEECCCCCccccccccEEEEEEEccCCCchhhe-eeee-------ecCCcEEEEEHHHCCCC
Confidence 456677777754456899999987421 12467777654322211 1110 02234555667799999
Q ss_pred CEEEEEeCc-----------cCceeEEECCCC
Q 012895 124 TTYYYRCGG-----------RGPEFSFKMPPA 144 (454)
Q Consensus 124 t~Y~Yrv~~-----------~s~~~~F~T~p~ 144 (454)
+.|..||.. +|....|+|+++
T Consensus 170 ~~Y~vqVR~k~~~~~G~WSeWS~~~~~~t~~~ 201 (207)
T 1iar_B 170 ISYRARVRAWAQAYNTTWSEWSPSTKWHNSYR 201 (207)
T ss_dssp CCEEEEEEEECGGGTCCCCCCCCCEEEC----
T ss_pred CEEEEEEEEecCCCCCCCCCCCcCeEEECCCC
Confidence 999999862 456778888653
No 189
>1n26_A IL-6 receptor alpha chain; transmembrane, glycoprotein, immunoglobulin domain, cytokine; HET: NAG BMA MAN NDG; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.2.1 b.1.2.1 PDB: 1p9m_C 2arw_A
Probab=84.06 E-value=3.3 Score=38.90 Aligned_cols=70 Identities=13% Similarity=0.117 Sum_probs=45.2
Q ss_pred CCCCeeEEEEecC--CCcEEEEEEeCCCC------CccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCC
Q 012895 51 ESDPQQVHISLAA--KDYIRVSWITDDKE------AESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEP 122 (454)
Q Consensus 51 ~~~p~~v~l~~~~--~~~~~v~W~t~~~~------~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p 122 (454)
...|..+.+.... .+++.|+|...... -.-.|+|.......+..+.. ......+.|.+|+|
T Consensus 197 P~pP~~l~v~~~~~~~~sv~lsW~~p~~~~~~~~~~~Y~V~yr~~~~~~W~~~~~-----------~~~~~~~~l~~L~p 265 (325)
T 1n26_A 197 PDPPANITVTAVARNPRWLSVTWQDPHSWNSSFYRLRFELRYRAERSKTFTTWMV-----------KDLQHHCVIHDAWS 265 (325)
T ss_dssp CCCCEEEEEEECTTCTTCEEEEEECCTTCCCSSSCEEEEEEEEETTCSCCEEEEC-----------GGGCSEEEESSCCT
T ss_pred CCCCcceEEEEecCCCCEEEEEECCCCccCCCcEeEEEEEEEEeCCCCCCEEEcc-----------cCCceEEEEeCCCC
Confidence 3567788887754 46999999987531 12356776654333322211 11224567899999
Q ss_pred CCEEEEEeC
Q 012895 123 ATTYYYRCG 131 (454)
Q Consensus 123 ~t~Y~Yrv~ 131 (454)
++.|.+||.
T Consensus 266 ~t~Y~~rVr 274 (325)
T 1n26_A 266 GLRHVVQLR 274 (325)
T ss_dssp TCCEEEEEE
T ss_pred CCeEEEEEE
Confidence 999999996
No 190
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Probab=83.78 E-value=12 Score=35.32 Aligned_cols=81 Identities=23% Similarity=0.263 Sum_probs=49.2
Q ss_pred CCCeeEEEEecCCCcEEEEEEeCCCC-Cc----cEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEE
Q 012895 52 SDPQQVHISLAAKDYIRVSWITDDKE-AE----SVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTY 126 (454)
Q Consensus 52 ~~p~~v~l~~~~~~~~~v~W~t~~~~-~~----~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y 126 (454)
..|..+.+.....+++.|.|...... +. -.|+|...+...+.... ..+......|.+|+|++.|
T Consensus 197 ~~P~~~~~~~~~~~~~~l~w~~p~~~~g~pi~~y~v~~~~~~~~~~~~~~-----------~~~~~~~~~i~~l~~~~~y 265 (389)
T 2jll_A 197 SSPYGVKIIELSQTTAKVSFNKPDSHGGVPIHHYQVDVKEVASEIWKIVR-----------SHGVQTMVVLNNLEPNTTY 265 (389)
T ss_dssp CCCEEEEEEEECSSCEEEEEECCSCCTTSCEEEEEEEEEETTCSCCEEEE-----------CSTTCSEEEECSCCTTCEE
T ss_pred CCCcceEEeeccCCEEEEEEeCCCCCCCcceEEEEEEEEECCCcccEEee-----------ccCCcceEEECCccCCCEE
Confidence 35556666666678999999854321 21 24566655433222111 1222345678999999999
Q ss_pred EEEeCc--------cCceeEEECCC
Q 012895 127 YYRCGG--------RGPEFSFKMPP 143 (454)
Q Consensus 127 ~Yrv~~--------~s~~~~F~T~p 143 (454)
.|+|.. .+....|+|.+
T Consensus 266 ~~~v~A~N~~G~~~~s~~~~~~t~~ 290 (389)
T 2jll_A 266 EIRVAAVNGKGQGDYSKIEIFQTLP 290 (389)
T ss_dssp EEEEEEEESSCBCCCCCCEEEECCC
T ss_pred EEEEEEEcCCccCCCCcceEEEecC
Confidence 999853 24456777744
No 191
>4doh_B Interleukin-20 receptor subunit beta; IL10 family cytokine receptor complex, alpha helical cytokin beta sandwhich receptor fold, signaling complex; HET: NAG; 2.80A {Homo sapiens}
Probab=83.46 E-value=2.3 Score=37.34 Aligned_cols=70 Identities=11% Similarity=0.075 Sum_probs=43.6
Q ss_pred CCCeeEEEEecCCCcEEEEEEeCCCCCccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEEEEeC
Q 012895 52 SDPQQVHISLAAKDYIRVSWITDDKEAESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYYYRCG 131 (454)
Q Consensus 52 ~~p~~v~l~~~~~~~~~v~W~t~~~~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Yrv~ 131 (454)
..|-.+.|. .+.+++.|.|......-.-.|.|+..+........ .. . .....+.|.+|+|+|.|..+|.
T Consensus 110 i~PP~v~v~-~~~~~i~V~~~~p~~~l~Y~v~y~~~~~~~~~~~~----~~-----~-~~~~~~~i~~L~p~t~Ycv~Vr 178 (206)
T 4doh_B 110 LTRPGMEIT-KDGFHLVIELEDLGPQFEFLVAYWRREPGAEEHVK----MV-----R-SGGIPVHLETMEPGAAYCVKAQ 178 (206)
T ss_dssp CCCCCEEEE-EETTEEEEEECCCCTTCEEEEEEEESSSSCCCEEE----EE-----C-CSSSEEEEEECCSSSCEEEEEE
T ss_pred cCCCeEEEE-eCCCEEEEEecCCCCcEEEEEEEEEcCCCceeEEe----EE-----c-cCCeEEEEeCCCCCCcEEEEEE
Confidence 445557776 45889999998653333556778776543221110 00 0 0123477999999999999986
Q ss_pred c
Q 012895 132 G 132 (454)
Q Consensus 132 ~ 132 (454)
.
T Consensus 179 a 179 (206)
T 4doh_B 179 T 179 (206)
T ss_dssp E
T ss_pred E
Confidence 3
No 192
>2b5i_C Cytokine receptor common gamma chain; four-helix bundle, fibronectin domain, cytokine-cytokine REC complex; HET: NAG; 2.30A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 3bpl_C* 3qb7_C* 3qaz_C*
Probab=83.30 E-value=4.4 Score=35.07 Aligned_cols=70 Identities=13% Similarity=0.215 Sum_probs=46.1
Q ss_pred CCCCeeEEEEecCCCcEEEEEEeCCCC--CccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEEE
Q 012895 51 ESDPQQVHISLAAKDYIRVSWITDDKE--AESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYYY 128 (454)
Q Consensus 51 ~~~p~~v~l~~~~~~~~~v~W~t~~~~--~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y 128 (454)
...|..+++.......+.|.|..+... -.-.|+|....+..+...... ......|.+|.|++.|..
T Consensus 99 P~pP~~l~~~~~~~~~l~l~W~~p~~~~~l~yev~y~~~~~~~w~~~~~~------------~~~~~~l~~l~p~~~Y~v 166 (199)
T 2b5i_C 99 PWAPENLTLHKLSESQLELNWNNRFLNHCLEHLVQYRTDWDHSWTEQSVD------------YRHKFSLPSVDGQKRYTF 166 (199)
T ss_dssp CCCCEEEEEEEEETTEEEEEEECSSCSTTCEEEEEEEETTCSSCEEEEEC------------SSCEEEECSCCTTSCEEE
T ss_pred cCCCcEEEEEECCCCCEEEEECCCCCCCceEEEEEEeecCCcccEEEecc------------CceEEEecCCCCCcEEEE
Confidence 446777778776667899999998521 234688877544333322111 123456789999999999
Q ss_pred EeCc
Q 012895 129 RCGG 132 (454)
Q Consensus 129 rv~~ 132 (454)
||..
T Consensus 167 qVR~ 170 (199)
T 2b5i_C 167 RVRS 170 (199)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9864
No 193
>3bpo_C Interleukin-13 receptor alpha-1 chain; IL4, IL13, IL4R, IL13R, cytokine, glycoprotein, IM response, membrane, phosphoprotein, secreted; HET: NAG; 3.00A {Homo sapiens} PDB: 3bpn_C*
Probab=82.12 E-value=5.9 Score=36.85 Aligned_cols=81 Identities=15% Similarity=0.054 Sum_probs=44.9
Q ss_pred CCCCeeEEEEecCCCcEEEEEEeCCCCC----ccEEEEeecCCCCceEEEeEeEE--EeeeeeecCeEEEEEECCCCCCC
Q 012895 51 ESDPQQVHISLAAKDYIRVSWITDDKEA----ESVVEYGKLPGRYNTVATGEHTS--YQFFFYKSGKIHHVKIGPLEPAT 124 (454)
Q Consensus 51 ~~~p~~v~l~~~~~~~~~v~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~gL~p~t 124 (454)
...|..+++. ...+++.|+|..+.... .-.|+|.......+......... .............+.|.+|+|+|
T Consensus 200 P~pP~~l~~~-~~~~~l~lsW~~P~~~~~~~l~Yev~y~~~~~~~w~~~~~~~~~c~~~~~~~~~~~~~~~~l~~L~p~t 278 (314)
T 3bpo_C 200 PDPPHIKNLS-FHNDDLYVQWENPQNFISRCLFYEVEVNNSQTETHNVFYVQEAKCENPEFERNVENTSCFMVPGVLPDT 278 (314)
T ss_dssp CCCCEEEEEE-EETTEEEEEEECCTTCCGGGEEEEEEEEC--CCCEEEEEESCCCCCCTTSSCCCSSEEEEEEESCCTTS
T ss_pred eCCCCEEEEE-EcCCcEEEEEeCCCccCCceEEEEEEEEECCCCcceEEecccccccccccccccCCceEEEEccCCCCC
Confidence 4567778886 44679999999885322 23566765543322211100000 00000011235667899999999
Q ss_pred EEEEEeCc
Q 012895 125 TYYYRCGG 132 (454)
Q Consensus 125 ~Y~Yrv~~ 132 (454)
.|.+||..
T Consensus 279 ~Y~~qVra 286 (314)
T 3bpo_C 279 LNTVRIRV 286 (314)
T ss_dssp CEEEEEEE
T ss_pred EEEEEEEe
Confidence 99999864
No 194
>3e0g_A Leukemia inhibitory factor receptor; IG domain, cytokine binding homology region (CHR), cell MEMB disease mutation, glycoprotein, membrane; HET: NAG MAN FUC; 3.10A {Homo sapiens}
Probab=81.46 E-value=1 Score=45.38 Aligned_cols=86 Identities=13% Similarity=0.091 Sum_probs=52.8
Q ss_pred CCCCeeEEEEecCCCcEEEEEEeCCCC----CccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEE
Q 012895 51 ESDPQQVHISLAAKDYIRVSWITDDKE----AESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTY 126 (454)
Q Consensus 51 ~~~p~~v~l~~~~~~~~~v~W~t~~~~----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y 126 (454)
...|..+++.....+++.|.|..+... -.-.|+|.......... .+... ....-.+.+.|.+|+|+|.|
T Consensus 382 P~PP~nl~v~~~~stsl~LsW~~P~~~~~~~L~YeVrYr~~~~~~~~~------~vsv~-~~~~~~~s~~l~~L~PgT~Y 454 (483)
T 3e0g_A 382 PHTPTSFKVKDINSTAVKLSWHLPGNFAKINFLCEIEIKKSNSVQEQR------NVTIQ-GVENSSYLVALDKLNPYTLY 454 (483)
T ss_dssp CCCCEEEEECCSSSSSCCEEEECCSCCTTSBCCCEEEEECSSSCCCEE------ECCCB-CCSSSBCCCCCCSCCSSSSC
T ss_pred CCCCeeeEEEEecCCeEEEEECCCCCCCCceEEEEEEEEECCCCCceE------EEEEe-ccCCceeEEEEeccCCCcEE
Confidence 356777777655578999999987532 23578887664322111 01100 00112345678999999999
Q ss_pred EEEeCc----------cCceeEEECCC
Q 012895 127 YYRCGG----------RGPEFSFKMPP 143 (454)
Q Consensus 127 ~Yrv~~----------~s~~~~F~T~p 143 (454)
..||.. +|+...|+|++
T Consensus 455 ~vrVRA~~~g~g~WSeWS~~~~f~T~E 481 (483)
T 3e0g_A 455 TFRIRCSTETFWKWSKWSNKKQHLTTE 481 (483)
T ss_dssp EEEEECCCSSCCCCCCCCCCCCCCCCC
T ss_pred EEEEEEeeCCCCCcCCCCCceeeECCC
Confidence 999863 24556777765
No 195
>1zlg_A Anosmin 1; insulin-like growth factor receptor Cys-rich fold, WHEY acidic protein fold, fibronectin type III fold, hormone- growth factor complex; NMR {Homo sapiens}
Probab=81.29 E-value=3.4 Score=43.47 Aligned_cols=68 Identities=15% Similarity=0.230 Sum_probs=40.9
Q ss_pred CC-eeEEEEecCCCcEEEEEEeCCC----CCccEEEEeecCC--------CCceEEEeEeEEEeeeeeecCeEEEEEECC
Q 012895 53 DP-QQVHISLAAKDYIRVSWITDDK----EAESVVEYGKLPG--------RYNTVATGEHTSYQFFFYKSGKIHHVKIGP 119 (454)
Q Consensus 53 ~p-~~v~l~~~~~~~~~v~W~t~~~----~~~~~v~y~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g 119 (454)
.| ..+.+.....+++.|.|..... +..-.|+|....+ ..+..+.. .....+.|++
T Consensus 162 ~P~~~l~v~~~~~~sv~l~W~pp~~~~~~~i~Y~V~~r~~~g~~~~~~~~~~w~~v~~------------~~~~~~~i~~ 229 (680)
T 1zlg_A 162 KPRKELRFTELQSGQLEVKWSSKFNISIEPVIYVVQRRWNYGIHPSEDDATHWQTVAQ------------TTDERVQLTD 229 (680)
T ss_pred cccccceEEeccCceEEEEEeCCCCCCCCCEEEEEEEEECCCCCcCccccCceEEEEe------------cCCCeEEeCC
Confidence 45 5666766668899999997621 1123556654421 01111110 1123467899
Q ss_pred CCCCCEEEEEeCc
Q 012895 120 LEPATTYYYRCGG 132 (454)
Q Consensus 120 L~p~t~Y~Yrv~~ 132 (454)
|+|+|.|.|||..
T Consensus 230 L~P~t~Y~frV~A 242 (680)
T 1zlg_A 230 IRPSRWYQFRVAA 242 (680)
T ss_pred CCCCCEEEEEEEE
Confidence 9999999999853
No 196
>3l5h_A Interleukin-6 receptor subunit beta; IG-like, FNIII, cell membrane, disulfide bond, glycoprotein, immunoglobulin domain, membrane, phosphoprotein; HET: NAG NDG BMA FUC; 3.60A {Homo sapiens}
Probab=80.46 E-value=0.85 Score=46.82 Aligned_cols=85 Identities=13% Similarity=0.178 Sum_probs=49.6
Q ss_pred CCCCeeEEEEec--CCCcEEEEEEeCCCC----CccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCC
Q 012895 51 ESDPQQVHISLA--AKDYIRVSWITDDKE----AESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPAT 124 (454)
Q Consensus 51 ~~~p~~v~l~~~--~~~~~~v~W~t~~~~----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t 124 (454)
...|..+.+... ..+++.|+|...... ..-.|+|.......+...... ..........|.+|+|+|
T Consensus 199 p~pP~~~~~~~~~~~~~~v~l~W~~p~~~~~~~~~Y~v~~~~~~~~~w~~~~~~--------~~~~~~~~~~i~~L~p~t 270 (589)
T 3l5h_A 199 PNPPHNLSVINSEELSSILKLTWTNPSIKSVIILKYNIQYRTKDASTWSQIPPE--------DTASTRSSFTVQDLKPFT 270 (589)
T ss_dssp CCCCCSCEEECTTTCTTCEEEECCCCGGGGTSCEEEEEEEEETTCSCCBCCCTT--------SSCSCCSEEEECSCCSSC
T ss_pred cCCCceEEEEecCCCCCeEEEEeCCCCCCCeeeEEEEEEECCCCCCCcEEEccc--------cCcCceeEEEECCCCCCC
Confidence 345666777533 378999999876422 124566665543222211000 011223456789999999
Q ss_pred EEEEEeCc-----------cCceeEEECCC
Q 012895 125 TYYYRCGG-----------RGPEFSFKMPP 143 (454)
Q Consensus 125 ~Y~Yrv~~-----------~s~~~~F~T~p 143 (454)
.|.+||.. ++....|+|++
T Consensus 271 ~Y~~~V~a~~~~g~g~~S~~S~~~~~~T~~ 300 (589)
T 3l5h_A 271 EYVFRIRCMKEDGKGYWSDWSEEASGITYE 300 (589)
T ss_dssp CEEEEEEEEESSSCSCCCCCCCCBCCCCCC
T ss_pred EEEEEEEEEeCCCCCccCCCCCccccccCc
Confidence 99999963 13455677754
No 197
>2erj_C Cytokine receptor common gamma chain; immune system-cytok complex; HET: NAG FUC BMA; 3.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1
Probab=80.40 E-value=7.3 Score=35.23 Aligned_cols=69 Identities=13% Similarity=0.218 Sum_probs=45.1
Q ss_pred CCCCeeEEEEecCCCcEEEEEEeCCCCC--ccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEEE
Q 012895 51 ESDPQQVHISLAAKDYIRVSWITDDKEA--ESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYYY 128 (454)
Q Consensus 51 ~~~p~~v~l~~~~~~~~~v~W~t~~~~~--~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y 128 (454)
...|..+++.......+.|.|..+.... .-.|+|....+..+...... ......|.+|.|++.|..
T Consensus 137 P~PP~nl~v~~~~~~~l~l~W~~P~~~~~L~Yevry~~~~~~~W~~~~~~------------~~~~~~l~~L~p~~~Y~v 204 (247)
T 2erj_C 137 PWAPENLTLHKLSESQLELNWNNRFLNHCLEHLVQYRTDWDHSWTEQSVD------------YRHKFSLPSVDGQKRYTF 204 (247)
T ss_dssp CCCCEEEEEEESSSSCEEEEEECSSCCTTEEEEEEEECSSCSSCEEEEEC------------SSCEEEESCCCTTSCEEE
T ss_pred eCCCCeEEEEECCCCcEEEEECCCCCCCcEEEEEEEeeCCCCCCEEEecC------------CceEEEecCCCCCCEEEE
Confidence 4467778887766778999999985211 23577876544333332211 123456789999999999
Q ss_pred EeC
Q 012895 129 RCG 131 (454)
Q Consensus 129 rv~ 131 (454)
||.
T Consensus 205 qVR 207 (247)
T 2erj_C 205 RVR 207 (247)
T ss_dssp EEE
T ss_pred EEE
Confidence 986
No 198
>2gys_A Cytokine receptor common beta chain; dimer of interlocking chains of fibronectin-III domains, FOU fibronectin-III domains PER chain; HET: NAG FUC BMA NDG; 2.70A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1gh7_A* 3cxe_A* 1egj_A* 1c8p_A
Probab=80.25 E-value=17 Score=35.34 Aligned_cols=84 Identities=21% Similarity=0.267 Sum_probs=49.5
Q ss_pred CCCCeeEEEEecCCCcEEEEEEeCCCCC----------ccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCC
Q 012895 51 ESDPQQVHISLAAKDYIRVSWITDDKEA----------ESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPL 120 (454)
Q Consensus 51 ~~~p~~v~l~~~~~~~~~v~W~t~~~~~----------~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL 120 (454)
...|..|.+...+ +.+.|+|..+.... .-.|+|.... ..+..+... . .....+.+.+.+|
T Consensus 109 p~pP~~l~v~~~~-~~~~l~W~~p~~~~~~~~~~~~~l~Y~v~yr~~~-~~w~~~~~~----~----~~~~~~~~~~~~L 178 (419)
T 2gys_A 109 PPEPRDLQISTDQ-DHFLLTWSVALGSPQSHWLSPGDLEFEVVYKRLQ-DSWEDAAIL----L----SNTSQATLGPEHL 178 (419)
T ss_dssp CCCCEEEEEEEET-TEEEEEEECCC-----CCSCGGGEEEEEEEEETT-SCSTTCEEE----E----ESSSEEEECTTTC
T ss_pred CCCCCceEEEecC-CeEEEEECCCccccccchhccCceEEEEEEccCC-CChhheeee----c----ccceEEEechhhc
Confidence 4567888888765 69999999875321 1356666554 222111110 0 1122333334499
Q ss_pred CCCCEEEEEeCc--------------cCceeEEECCCC
Q 012895 121 EPATTYYYRCGG--------------RGPEFSFKMPPA 144 (454)
Q Consensus 121 ~p~t~Y~Yrv~~--------------~s~~~~F~T~p~ 144 (454)
.|++.|..||.. +|....|+|++.
T Consensus 179 ~p~~~Y~~rVra~~~~g~~~~G~wS~WS~~~~~~t~~~ 216 (419)
T 2gys_A 179 MPSSTYVARVRTRLAPGSRLSGRPSKWSPEVCWDSQPG 216 (419)
T ss_dssp CTTCEEEEEEEEEECTTSSCCBCCCCCCCCEEEECCCC
T ss_pred CCCCeEEEEEEEecCCCCCCCcccCCCCCceeeecccc
Confidence 999999999862 235577888765
No 199
>1q38_A Fibronectin; amyloid fibril, anastellin, extracellular matrix, dynamic fluctuations, conformational exchange, chaps, cell adhesion; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=79.41 E-value=0.67 Score=33.88 Aligned_cols=28 Identities=21% Similarity=0.263 Sum_probs=20.1
Q ss_pred EEEECCCCCCCEEEEEeCc-------cCceeEEEC
Q 012895 114 HVKIGPLEPATTYYYRCGG-------RGPEFSFKM 141 (454)
Q Consensus 114 ~~~l~gL~p~t~Y~Yrv~~-------~s~~~~F~T 141 (454)
.-+|.||+||++|.-++.+ +...|.|+|
T Consensus 39 SYtIsGLkPGvtYegQLisV~r~g~~EvtrfdfTT 73 (89)
T 1q38_A 39 SYTIKGLKPGVVYEGQLISIQQYGHQEVTRFDFTT 73 (89)
T ss_dssp CCCCCCCCTTCCEEEEEEEECTTSCCCEEEEEECS
T ss_pred eEEEeccCCCcEEEEEEEeeeecccCCceEEEEEe
Confidence 3358899999999988643 234567776
No 200
>4doh_R Interleukin-20 receptor subunit alpha; IL10 family cytokine receptor complex, alpha helical cytokin beta sandwhich receptor fold, signaling complex; HET: NAG; 2.80A {Homo sapiens}
Probab=77.81 E-value=11 Score=33.39 Aligned_cols=77 Identities=16% Similarity=0.111 Sum_probs=47.8
Q ss_pred CeeEEEEecCCCcEEEEEEeCCCC-----------------CccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEE
Q 012895 54 PQQVHISLAAKDYIRVSWITDDKE-----------------AESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVK 116 (454)
Q Consensus 54 p~~v~l~~~~~~~~~v~W~t~~~~-----------------~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 116 (454)
|-.|.|. ...+++.|.|.-+..+ -.-.|.|+..+..... ... .. .+.+.
T Consensus 111 PP~v~v~-~~~~~l~V~~~~P~~~~~~~~~~~~s~~~i~~~l~Y~V~y~~~~~~~~~--~~~---------~~--~~~~~ 176 (221)
T 4doh_R 111 PPEVALT-TDEKSISVVLTAPEKWKRNPEDLPVSMQQIYSNLKYNVSVLNTKSNRTW--SQC---------VT--NHTLV 176 (221)
T ss_dssp CCEEEEE-CCSSCEEEEEECCBCCCSSTTSCCCBHHHHSTTCEEEEEEEETTTTEEE--EEE---------EC--SSEEE
T ss_pred CCEEEEE-ECCCEEEEEEeCCCcccccCCCCceEHHHhcCceEEEEEEEECCCCcEE--EEe---------ec--CcEEE
Confidence 3348887 4578999999976422 1235666665433211 100 11 13567
Q ss_pred ECCCCCCCEEEEEeCc----------cCceeEEECCCC
Q 012895 117 IGPLEPATTYYYRCGG----------RGPEFSFKMPPA 144 (454)
Q Consensus 117 l~gL~p~t~Y~Yrv~~----------~s~~~~F~T~p~ 144 (454)
|.+|+|+|.|..+|.. .|....|+|.++
T Consensus 177 l~~L~p~t~Ycv~V~a~~~~~~~~g~~S~~~c~~T~~d 214 (221)
T 4doh_R 177 LTWLEPNTLYCVHVESFVPGPPRRAQPSEKQCARTLKD 214 (221)
T ss_dssp ECSCCTTCEEEEEEEEECSSSCCCCCCCEEEEEECCCC
T ss_pred EecCCCCCcEEEEEEEEEcCCCCCCCCCCCEeEecCCC
Confidence 9999999999999852 245667888664
No 201
>2uvf_A Exopolygalacturonase; GH28, pectin, cell WALL, hydrolase, periplasm, beta-helix, glycosidase, EXO-activity; HET: AD0; 2.1A {Yersinia enterocolitica} PDB: 2uve_A*
Probab=77.60 E-value=4.7 Score=41.88 Aligned_cols=33 Identities=15% Similarity=0.316 Sum_probs=24.5
Q ss_pred EEEEEECCCCCCCEEEEEeCc---------cCceeEEECCCC
Q 012895 112 IHHVKIGPLEPATTYYYRCGG---------RGPEFSFKMPPA 144 (454)
Q Consensus 112 ~~~~~l~gL~p~t~Y~Yrv~~---------~s~~~~F~T~p~ 144 (454)
.++.++++|+|+|+|.|+|.. +++....+|++.
T Consensus 112 ~~~~~v~~L~p~T~Y~~~v~a~d~~G~~s~ds~~V~~~T~~~ 153 (608)
T 2uvf_A 112 MQNFTVIGLKPETSYQFTVKAQYADGSLSVASKPITAKTSAK 153 (608)
T ss_dssp CCEEEECSCCTTCEEEEEEEEEETTSCBCCCCCCEEEECCCC
T ss_pred eeeEEecCCCCCCEEEEEEEEecCCCcccccchhcccccccC
Confidence 467889999999999999853 234556666654
No 202
>3se4_A Interferon alpha/beta receptor 1; type I interferon signaling complex, extracellular space, IM system receptor; HET: NAG; 3.50A {Homo sapiens} PDB: 3se3_A*
Probab=77.15 E-value=11 Score=36.77 Aligned_cols=64 Identities=19% Similarity=0.182 Sum_probs=39.7
Q ss_pred CeeEEEEecCCCcEEEEEEeCCCCC-----------ccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCC
Q 012895 54 PQQVHISLAAKDYIRVSWITDDKEA-----------ESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEP 122 (454)
Q Consensus 54 p~~v~l~~~~~~~~~v~W~t~~~~~-----------~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p 122 (454)
|..|.+... .+++.|+|. +.... .-.|.|+..+........+ -...+.|.+|.|
T Consensus 108 pP~v~~~~~-~~si~v~w~-P~~~~g~~~~~~~~~~~Y~v~y~~~~~~~~~~~~~-------------~~~~~~i~~L~p 172 (414)
T 3se4_A 108 PPEVHLEAE-DKAIVIHIS-PGTKDSVMWALDGLSFTYSLVIWKNSSGVEERIEN-------------IYSRHKIYKLSP 172 (414)
T ss_dssp CCEEEEEEC-SSCEEEEEE-CSSSSCTTTGGGGSSCEEEEEEEETTTCCEEEEEE-------------ECSEEEECCCCT
T ss_pred CCeEEEEEc-CCEEEEEEE-cCCCCCceeeeecCcEEEEEEEEECCCCceEEEec-------------CCcEEEEcCCCC
Confidence 334776644 458999999 64221 2356677665433221111 123467999999
Q ss_pred CCEEEEEeCc
Q 012895 123 ATTYYYRCGG 132 (454)
Q Consensus 123 ~t~Y~Yrv~~ 132 (454)
++.|..+|..
T Consensus 173 ~t~Y~~~V~A 182 (414)
T 3se4_A 173 ETTYCLKVKA 182 (414)
T ss_dssp TCEEEEEEEE
T ss_pred CCeEEEEEEE
Confidence 9999999863
No 203
>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens}
Probab=75.40 E-value=13 Score=33.74 Aligned_cols=69 Identities=16% Similarity=0.221 Sum_probs=40.8
Q ss_pred CCCeeEEEEecCCCcEEEEEEeCCCC-Ccc----EEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEE
Q 012895 52 SDPQQVHISLAAKDYIRVSWITDDKE-AES----VVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTY 126 (454)
Q Consensus 52 ~~p~~v~l~~~~~~~~~v~W~t~~~~-~~~----~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y 126 (454)
..|..+.+.....+++.|.|..+... ... .|+|...+...+...... . .....|.+|.|++.|
T Consensus 200 ~~p~~~~~~~~~~~~v~l~w~~p~~~g~~~i~~y~v~~~~~~~~~w~~~~~~----------~--~~~~~i~~l~~~~~y 267 (305)
T 2nzi_A 200 DPPRGVKVSDVSRDSVNLTWTEPASDGGSKITNYIVEKCATTAERWLRVGQA----------R--ETRYTVINLFGKTSY 267 (305)
T ss_dssp CCCEEEEEESCCSSCEEEEEECCSCCSBSCEEEEEEEEEETTSCCEEEEEEE----------S--SSEEEECSCCSSCEE
T ss_pred CCCCCceeeeccCCEEEEEEcCCccCCCCceeEEEEEEecCCCCccEECccc----------c--CceEEecCCCCCCeE
Confidence 45666666655688899999864322 222 334443333222221111 1 234678999999999
Q ss_pred EEEeCc
Q 012895 127 YYRCGG 132 (454)
Q Consensus 127 ~Yrv~~ 132 (454)
.|||..
T Consensus 268 ~~~~~A 273 (305)
T 2nzi_A 268 QFRVIA 273 (305)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 999964
No 204
>3s98_A Interferon alpha/beta receptor 1; human, type I interferons, receptor chain, ifnar1, fibronect III, type I interferon receptor chain; HET: NAG; 1.90A {Homo sapiens}
Probab=72.46 E-value=17 Score=33.65 Aligned_cols=61 Identities=18% Similarity=0.133 Sum_probs=36.6
Q ss_pred eEEEEecCCCcEEEEEEeCCCC-----------CccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCC
Q 012895 56 QVHISLAAKDYIRVSWITDDKE-----------AESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPAT 124 (454)
Q Consensus 56 ~v~l~~~~~~~~~v~W~t~~~~-----------~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t 124 (454)
.|.+...+ +++.|.|. +... -.-.|.|+..+........+ -...+.|.+|+|+|
T Consensus 106 ~v~~~~~~-~si~v~w~-P~~~~~~~~~~~g~~l~Y~v~y~~~~~~~~~~~~~-------------~~~~~~l~~L~p~t 170 (306)
T 3s98_A 106 EVHLEAED-KAIVIHIS-PGTKDSVMWALDGLSFTYSLVIWKNSSGVEERIEN-------------IYSRHKIYKLSPET 170 (306)
T ss_dssp EEEEEECS-SCEEEEEE-CC---CCCC-----CCEEEEEEEETTTCCCEEEEE-------------ECTEEEECSCCTTC
T ss_pred eEEEEEcC-CEEEEEEE-CCCCCCcceeccCCcEEEEEEEEECCCCCeEEEec-------------ccceEEEccCCCCC
Confidence 47776544 58999998 4221 11245566554432221111 12357799999999
Q ss_pred EEEEEeC
Q 012895 125 TYYYRCG 131 (454)
Q Consensus 125 ~Y~Yrv~ 131 (454)
.|..+|.
T Consensus 171 ~Y~~~V~ 177 (306)
T 3s98_A 171 TYCLKVK 177 (306)
T ss_dssp EEEEEEE
T ss_pred eEEEEEE
Confidence 9999985
No 205
>1i1r_A GP130, interleukin-6 receptor beta chain; cytokine/receptor complex, GP130; 2.40A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1p9m_A
Probab=72.24 E-value=6.6 Score=36.19 Aligned_cols=72 Identities=6% Similarity=0.050 Sum_probs=43.9
Q ss_pred CCCCCeeEEEEecCCCcEEEEEEeCCCCC---ccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCC-CCCCE
Q 012895 50 SESDPQQVHISLAAKDYIRVSWITDDKEA---ESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPL-EPATT 125 (454)
Q Consensus 50 ~~~~p~~v~l~~~~~~~~~v~W~t~~~~~---~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL-~p~t~ 125 (454)
....|..+.....+.+++.++|....... .-.|+|........ .. . ...+-...+.|.+| .|++.
T Consensus 103 ~P~~P~~l~~~~~~~~~v~l~W~~~~~~~~~~~Y~v~~~~~~~~~~-----~~---~---~~~~~~~~~~i~~L~~p~t~ 171 (303)
T 1i1r_A 103 PPEKPKNLSCIVNEGKKMRCEWDGGRETHLETNFTLKSEWATHKFA-----DC---K---AKRDTPTSCTVDYSTVYFVN 171 (303)
T ss_dssp CCCCCEEEEEEEETTSCCEEEEECCSCCSSCCEEEEEEEETTEECC-----CE---E---CCSSCTTEEECSSCCCTTSC
T ss_pred CCCCCeeeEEEECCCCcEEEEccCCCCCCCCcCEEEEEEecCCCCc-----cC---C---CcCCCceEEEECCcCccccc
Confidence 34567777776666788999999775322 23455543321000 00 0 01223356789999 99999
Q ss_pred EEEEeCc
Q 012895 126 YYYRCGG 132 (454)
Q Consensus 126 Y~Yrv~~ 132 (454)
|.+||..
T Consensus 172 Y~f~V~A 178 (303)
T 1i1r_A 172 IEVWVEA 178 (303)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 9999864
No 206
>3b4n_A Endo-pectate lyase; pectin, galacturonic acid, right-handed parallel beta helix fold; 1.45A {Erwinia chrysanthemi} PDB: 3b8y_A* 3b90_A
Probab=69.12 E-value=12 Score=35.24 Aligned_cols=61 Identities=21% Similarity=0.343 Sum_probs=36.2
Q ss_pred EEecC-CCcEEEEEEeCC-CCCccEEEEeecCCC--CceEEE--eEeEEEeeeeeecCeEEEEEECCCCCCCEEEEEeCc
Q 012895 59 ISLAA-KDYIRVSWITDD-KEAESVVEYGKLPGR--YNTVAT--GEHTSYQFFFYKSGKIHHVKIGPLEPATTYYYRCGG 132 (454)
Q Consensus 59 l~~~~-~~~~~v~W~t~~-~~~~~~v~y~~~~~~--~~~~~~--~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Yrv~~ 132 (454)
|+... .+.+.++|..+. ...+..|.=+++... +...+. ++.++|++ ++|.+||+|||.|..
T Consensus 24 L~at~~~~~v~LsWs~s~~~v~~~~VYRdT~s~~sgr~ria~~~~st~tytD-------------t~~~~GttYyYwVk~ 90 (344)
T 3b4n_A 24 LMLSQKSDVNYLGWSTDESKVARQEVYRGTTSNPDLRERIAVLDAETRTFKD-------------ADTNSGLNYWYWVDV 90 (344)
T ss_dssp EEEEEETTEEEEEEEECCSSEEEEEEEEESSSCGGGCEEEEEECSSCCEEEE-------------CCCCTTCCCEEEEEE
T ss_pred eeeeccCCeEEEEeecCCCCeeeEEEEccCCCCCCcceEEEeecccccEEEe-------------cCcCCCcEEEEEEEE
Confidence 44444 889999999885 223333333333332 223333 23344442 589999999999863
No 207
>4go6_B HCF C-terminal chain 1; tandem fibronectin repeat, protein interaction, transcriptio protein binding; 2.70A {Homo sapiens}
Probab=61.78 E-value=26 Score=30.83 Aligned_cols=16 Identities=6% Similarity=0.027 Sum_probs=13.6
Q ss_pred ECCCCCCCEEEEEeCc
Q 012895 117 IGPLEPATTYYYRCGG 132 (454)
Q Consensus 117 l~gL~p~t~Y~Yrv~~ 132 (454)
+.+|.+++.|.|||..
T Consensus 167 ~~~L~~~t~Y~frV~A 182 (232)
T 4go6_B 167 HIDYTTKPAIIFRIAA 182 (232)
T ss_dssp CBEESSSEEEEEEEEE
T ss_pred eecCccCCceEEEEEE
Confidence 5689999999999964
No 208
>4go6_B HCF C-terminal chain 1; tandem fibronectin repeat, protein interaction, transcriptio protein binding; 2.70A {Homo sapiens}
Probab=61.04 E-value=7.5 Score=34.52 Aligned_cols=30 Identities=30% Similarity=0.430 Sum_probs=20.8
Q ss_pred EEEECCCCCCCEEEEEeCc--------cCceeEEECCC
Q 012895 114 HVKIGPLEPATTYYYRCGG--------RGPEFSFKMPP 143 (454)
Q Consensus 114 ~~~l~gL~p~t~Y~Yrv~~--------~s~~~~F~T~p 143 (454)
..++++|+|+|.|.|||.. .+....++|++
T Consensus 47 ~~~~~~L~p~t~Y~frV~A~n~~G~g~~s~~~~~~t~~ 84 (232)
T 4go6_B 47 QLKKQELQPGTAYKFRVAGINACGRGPFSEISAFKTCL 84 (232)
T ss_dssp --CEEECCTTCEEEEEEEEEETTEEEEECCCEEEECCC
T ss_pred EEEeCCCCCCCEEEEEEEEEeCCCccccccceeeeecC
Confidence 3567899999999999963 24455666643
No 209
>2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase, glycoprotein, receptor protei tyrosine phosphatase, cell adhesion; HET: NAG; 3.10A {Homo sapiens}
Probab=58.68 E-value=44 Score=34.96 Aligned_cols=72 Identities=19% Similarity=0.288 Sum_probs=42.4
Q ss_pred EEecCCCcEEEEEEeCCCC-----CccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEEEEeCcc
Q 012895 59 ISLAAKDYIRVSWITDDKE-----AESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYYYRCGGR 133 (454)
Q Consensus 59 l~~~~~~~~~v~W~t~~~~-----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Yrv~~~ 133 (454)
+...+.+++.|.|...... ..-.|+|....... .... . .. .....|.+|+|++.|.|||...
T Consensus 270 ~~~~~~~~v~l~w~~~~~~g~~~i~~Y~v~~~~~~~~~-~~~~-~---------~~--~~~~~i~~L~p~t~Y~~~V~A~ 336 (731)
T 2v5y_A 270 LASVGATYLWIQLNANSINGDGPIVAREVEYCTASGSW-NDRQ-P---------VD--STSYKIGHLDPDTEYEISVLLT 336 (731)
T ss_dssp EEEECSSCEEEECCCSSBSSCSCCCEEEEEEEESSSSC-EEEE-E---------CC--SSEEEECSCCTTCEEEEEEEEE
T ss_pred eeccCCceEEEEeCCcccCCCCccEEEEEEEEECCCCc-eEEe-c---------cC--cceEEEeCCCCCCEEEEEEEEE
Confidence 3344578899999754211 12367776653321 1111 0 11 1456789999999999998521
Q ss_pred ----------CceeEEECCC
Q 012895 134 ----------GPEFSFKMPP 143 (454)
Q Consensus 134 ----------s~~~~F~T~p 143 (454)
+....++|++
T Consensus 337 ~~N~~G~s~~S~~~~~~t~~ 356 (731)
T 2v5y_A 337 RPGEGGTGSPGPALRTRTKC 356 (731)
T ss_dssp CSSTTCSCCBCCCEEEECCC
T ss_pred ecCCCccccCCCcEEeeecC
Confidence 3446777754
No 210
>2dtg_E Insulin receptor; IR ectodomain, X-RAY crystallography, hormone receptor/immune system complex; 3.80A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 c.10.2.5 c.10.2.5 g.3.9.1 PDB: 3loh_E
Probab=57.67 E-value=3.3 Score=45.22 Aligned_cols=20 Identities=20% Similarity=0.067 Sum_probs=17.1
Q ss_pred EEEEECCCCCCCEEEEEeCc
Q 012895 113 HHVKIGPLEPATTYYYRCGG 132 (454)
Q Consensus 113 ~~~~l~gL~p~t~Y~Yrv~~ 132 (454)
....|++|+|+|.|.|||..
T Consensus 549 ~~~~l~~L~P~T~Y~~~V~A 568 (897)
T 2dtg_E 549 PGWLMRGLKPWTQYAIFVKT 568 (897)
T ss_dssp CEEEECSCCSSCBCCBEEEE
T ss_pred cceEeCCCCCCcEEEEEEEE
Confidence 45779999999999999864
No 211
>2dtg_E Insulin receptor; IR ectodomain, X-RAY crystallography, hormone receptor/immune system complex; 3.80A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 c.10.2.5 c.10.2.5 g.3.9.1 PDB: 3loh_E
Probab=55.69 E-value=1.2 Score=48.65 Aligned_cols=89 Identities=12% Similarity=0.129 Sum_probs=47.2
Q ss_pred CCCCeeEEEEecCCCcEEEEEEeCCCCCccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEEEEe
Q 012895 51 ESDPQQVHISLAAKDYIRVSWITDDKEAESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYYYRC 130 (454)
Q Consensus 51 ~~~p~~v~l~~~~~~~~~v~W~t~~~~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Yrv 130 (454)
...|..+.+.....+++.|+|.-+..+......|...=............+-. ...-...++|++|+|| +|.|||
T Consensus 793 p~~P~~l~~~~~~~~sv~LsW~~P~~~nG~I~~Y~V~y~~~~~~~~~~~~~~~----~~~~~~~~~l~~L~pg-tY~~rV 867 (897)
T 2dtg_E 793 DDIVGPVTHEIFENNVVHLMWQEPKEPNGLIVLYEVSYRRYGDEELHLCDTRK----HFALERGCRLRGLSPG-NYSVRI 867 (897)
T ss_dssp CCCCCCCCCCSSSSSCCCCCCCCCCSCSSCEEEECCCCBSSSBCCCCCCCCSS----SCCCTTCCCCCSCCSS-EECCCC
T ss_pred CCCCcceEEEeCCCCEEEEEECCCCCCCCCEEEEEEEEEECCCcceEEEEeee----eecccCcEEECCCCCC-cEEEEE
Confidence 34555555555557889999987754433344554321000000000000000 0011223578999999 699998
Q ss_pred Cc--------cCceeEEECCCC
Q 012895 131 GG--------RGPEFSFKMPPA 144 (454)
Q Consensus 131 ~~--------~s~~~~F~T~p~ 144 (454)
.. .++...|+|++.
T Consensus 868 ~A~n~~G~G~~S~~v~~~T~~~ 889 (897)
T 2dtg_E 868 RATSLAGNGSWTEPTYFYVTDY 889 (897)
T ss_dssp CEEETTBCCCCCCCCEECCCCC
T ss_pred EEEeCCcccCCCCCEEEEeCCC
Confidence 63 356778988775
No 212
>2gys_A Cytokine receptor common beta chain; dimer of interlocking chains of fibronectin-III domains, FOU fibronectin-III domains PER chain; HET: NAG FUC BMA NDG; 2.70A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1gh7_A* 3cxe_A* 1egj_A* 1c8p_A
Probab=54.32 E-value=10 Score=36.90 Aligned_cols=66 Identities=21% Similarity=0.328 Sum_probs=35.4
Q ss_pred eEEEEecCCCcEEEEEEeCCC--CC---ccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEEEEe
Q 012895 56 QVHISLAAKDYIRVSWITDDK--EA---ESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYYYRC 130 (454)
Q Consensus 56 ~v~l~~~~~~~~~v~W~t~~~--~~---~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Yrv 130 (454)
.++|... .+++.|.|..+.. +. .-.|+|...... +...... .. . ....+.|.+|+|||.|.+||
T Consensus 326 ~l~v~~~-~~~l~l~W~~P~~~~~~~~l~Yev~y~~~~~~-w~~~~~~--~~-----~--~~~~~~l~~L~p~t~Y~~qV 394 (419)
T 2gys_A 326 SLQVTKD-GDSYSLRWETMKMRYEHIDHTFEIQYRKDTAT-WKDSKTE--TL-----Q--NAHSMALPALEPSTRYWARV 394 (419)
T ss_dssp EEEEC----CCCEEEEEC--------CEEEEEEEECSSSC-STTSCEE--EE-----E--SCSEEECCCCCSSCCCEEEE
T ss_pred CeEEEEe-CCeEEEEECCCcccccccceEEEEEEEcCCCC-cceeecc--cc-----c--cccEEEeccCCCCCeEEEEE
Confidence 4555553 6889999988732 11 235667665432 1100000 00 0 12357889999999999998
Q ss_pred Cc
Q 012895 131 GG 132 (454)
Q Consensus 131 ~~ 132 (454)
..
T Consensus 395 Ra 396 (419)
T 2gys_A 395 RV 396 (419)
T ss_dssp EE
T ss_pred EE
Confidence 64
No 213
>3l5h_A Interleukin-6 receptor subunit beta; IG-like, FNIII, cell membrane, disulfide bond, glycoprotein, immunoglobulin domain, membrane, phosphoprotein; HET: NAG NDG BMA FUC; 3.60A {Homo sapiens}
Probab=52.38 E-value=19 Score=36.42 Aligned_cols=70 Identities=13% Similarity=0.190 Sum_probs=40.3
Q ss_pred eeEEEEecCCCcEEEEEEeCCC-CCccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEEEEeCc
Q 012895 55 QQVHISLAAKDYIRVSWITDDK-EAESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYYYRCGG 132 (454)
Q Consensus 55 ~~v~l~~~~~~~~~v~W~t~~~-~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Yrv~~ 132 (454)
..+.+... .+++.|.|..... ...-.|+|........... .... ....-.....+++|+|++.|.|+|..
T Consensus 405 ~~l~~~~~-~~si~l~W~~p~~~i~~Y~v~~~~~~~~~~~~~-----~~~~--~~~~~~~~~~~~~L~p~t~Y~~~V~A 475 (589)
T 3l5h_A 405 MDLKAFPK-DNMLWVEWTTPRESVKKYILEWCVLSDKAPCIT-----DWQQ--EDGTVHRTYLRGNLAESKCYLITVTP 475 (589)
T ss_dssp CSCEEEEC-SSSEEEECCCCSSCCSCBCCEEEEECSSSCCCE-----EECC--BCSSCCEEECCSCCCSSSEEEEEECB
T ss_pred ceEEEEEC-CCeEEEEEECCCCCccEEEEEEEECCCCCCCcc-----CcEE--eeCCcceEEehhccccCcEEEEEEEE
Confidence 45555544 6889999987743 2334566766543211000 0000 01222344567999999999999974
No 214
>1cd9_B G-CSF-R, protein (G-CSF receptor); class1 cytokine, hematopoietic receptor, signal transduction cytokine; HET: NAG; 2.80A {Mus musculus} SCOP: b.1.2.1 b.1.2.1 PDB: 1pgr_B 1cto_A 1gcf_A
Probab=46.17 E-value=1.1e+02 Score=25.88 Aligned_cols=78 Identities=5% Similarity=-0.010 Sum_probs=43.4
Q ss_pred CCCeeEEEEec-CCCcEEEEEEeCCCC---CccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEE
Q 012895 52 SDPQQVHISLA-AKDYIRVSWITDDKE---AESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYY 127 (454)
Q Consensus 52 ~~p~~v~l~~~-~~~~~~v~W~t~~~~---~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~ 127 (454)
..|..+..... ..+.|++.|...... ..-.|.|......-.... .....-. ........++.+.+|.+.+.|.
T Consensus 6 ~~P~~l~c~~~~~~~~~~~~W~p~~~~~~~~~Y~l~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~~~~L~~~~~Y~ 82 (215)
T 1cd9_B 6 ASPSNLSCLMHLTTNSLVCQWEPGPETHLPTSFILKSFRSRADCQYQG-DTIPDCV--AKKRQNNCSIPRKNLLLYQYMA 82 (215)
T ss_dssp CCCEEEEEEEETTTTEEEEEEECCSCCSSCCEEEEEEEECCGGGCSCC-CEEEEEE--CCTTCCEEEEEGGGCCTTSCEE
T ss_pred CCCeeeeeecCCCcccEEEEecCCCCCCCceeEEEEEEecCCcccccc-cccccCC--CCCCCcEEEECCcccccceEEE
Confidence 45666766655 478999999976432 223455654321100000 0000000 0012245667888999999999
Q ss_pred EEeCc
Q 012895 128 YRCGG 132 (454)
Q Consensus 128 Yrv~~ 132 (454)
++|..
T Consensus 83 ~~V~A 87 (215)
T 1cd9_B 83 IWVQA 87 (215)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99864
No 215
>3se4_A Interferon alpha/beta receptor 1; type I interferon signaling complex, extracellular space, IM system receptor; HET: NAG; 3.50A {Homo sapiens} PDB: 3se3_A*
Probab=37.55 E-value=66 Score=30.90 Aligned_cols=84 Identities=11% Similarity=0.086 Sum_probs=47.0
Q ss_pred CCCCCeeEEEEecCCCcEEEEEEeCCCCCccEEEEeec--------CCCCceEEEeEeEEEeeeeeecCeEEEEEEC-CC
Q 012895 50 SESDPQQVHISLAAKDYIRVSWITDDKEAESVVEYGKL--------PGRYNTVATGEHTSYQFFFYKSGKIHHVKIG-PL 120 (454)
Q Consensus 50 ~~~~p~~v~l~~~~~~~~~v~W~t~~~~~~~~v~y~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-gL 120 (454)
....|..|.+...+ .++.|.|.-+.....-.|+|... ....+.... .+ ...-.+.+.|+ +|
T Consensus 206 ~~~~P~~v~~~~~~-~~~~l~W~pp~~~~~Y~v~y~~~~~~~~~~~~~~~w~~~~-~~--------~~~~~~~~~~t~~l 275 (414)
T 3se4_A 206 ELPPPENIEVSVQN-QNYVLKWDYTYANMTFQVQWLHAFLKRNPGNHLYKWKQIP-DC--------ENVKTTQCVFPQNV 275 (414)
T ss_dssp SSCCCEEEEEEEET-TEEEEEEECSSSSCEEEEEEEESGGGSCCCC--CCCCBCS-TT--------TTBSSSEEEEEGGG
T ss_pred ccCCCCccEEEEec-CCeEEEECCCCCCeEEEEEEEehhccccccccccCceECC-Cc--------cCCCCCEEcCCccc
Confidence 34567777766554 57899998864334456777752 011111110 00 00112344554 69
Q ss_pred CCCCEEEEEeCc--------cCceeEEECCC
Q 012895 121 EPATTYYYRCGG--------RGPEFSFKMPP 143 (454)
Q Consensus 121 ~p~t~Y~Yrv~~--------~s~~~~F~T~p 143 (454)
.+.+.|..||.. ++....|+|..
T Consensus 276 ~~~~~Y~~rV~A~n~~g~s~~s~~~~~~t~~ 306 (414)
T 3se4_A 276 FQKGIYLLRVQASDGNNTSFWSEEIKFDTEI 306 (414)
T ss_dssp SCSSEEEEEEEEECSSSEEEECCCEEEETTC
T ss_pred ccCccEEEEEEEecCCCcccccccccccchh
Confidence 999999999964 23456777653
No 216
>3n06_B PRL-R, prolactin receptor; PH dependence, hematopoietic cytokine, hormone-hormone recep complex; 2.00A {Homo sapiens} PDB: 3mzg_B 3n0p_B 3ncb_B 1bp3_B 3d48_R 3nce_B 3ncc_B 3ncf_B 3ew3_B 3npz_B 1f6f_B 2lfg_A
Probab=37.47 E-value=77 Score=26.78 Aligned_cols=74 Identities=11% Similarity=0.081 Sum_probs=44.0
Q ss_pred CCCeeEEEEecCCCcEEEEEEeCCC---CCccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEEE
Q 012895 52 SDPQQVHISLAAKDYIRVSWITDDK---EAESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYYY 128 (454)
Q Consensus 52 ~~p~~v~l~~~~~~~~~v~W~t~~~---~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y 128 (454)
..|+-+.....+.+.|.++|.-... +..-.|.|.......+.. +..+. .......++.+.+|.+.+.|.+
T Consensus 5 ~~P~nl~c~~~~~~~~~c~W~p~~~~~~~~~Y~l~y~~~~~~~~~~----c~~~~---~~~~~~c~~~~~~l~~~~~Y~~ 77 (210)
T 3n06_B 5 GKPEIFKCRSPNKETFTCWWRPGTDGGLPTNYSLTYHREGETLMHE----CPDYI---TGGPNSCHFGKQYTSMWRTYIM 77 (210)
T ss_dssp CCCEEEEEEBSSSSCEEEEEECCSSSCCCSEEEEEEEETTCCCCEE----CSCSS---TTCTTEEEECGGGCCSSSCEEE
T ss_pred CCCeEeEEEeCCCCeEEEEECCCCCCCCCceEEEEEEECCCCcccc----CCCCC---CCCCeEEEeCCCCcccceeEEE
Confidence 4577777776678999999997643 223456666543211111 00000 0112345556678999999999
Q ss_pred EeCc
Q 012895 129 RCGG 132 (454)
Q Consensus 129 rv~~ 132 (454)
+|..
T Consensus 78 ~V~A 81 (210)
T 3n06_B 78 MVNA 81 (210)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9864
No 217
>3g9v_A Interleukin 22 receptor, alpha 2; cytokine, cytokine receptor, receptor, glycoprotein, polymorphism, secreted, cytokine/cytokine receptor complex; 2.76A {Homo sapiens}
Probab=34.54 E-value=12 Score=32.69 Aligned_cols=19 Identities=26% Similarity=0.359 Sum_probs=6.4
Q ss_pred EEEECCCCCCCEEEEEeCc
Q 012895 114 HVKIGPLEPATTYYYRCGG 132 (454)
Q Consensus 114 ~~~l~gL~p~t~Y~Yrv~~ 132 (454)
.+.|.+|+|+|.|..+|..
T Consensus 173 ~~~i~~L~p~t~Ycv~V~a 191 (211)
T 3g9v_A 173 AVEIEALTPHSSYCVVAEI 191 (211)
T ss_dssp CCC----------CEEEEE
T ss_pred EEEEecCCCCCeEEEEEEE
Confidence 4568999999999999864
No 218
>3w01_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; HET: PGE; 1.54A {Staphylococcus aureus} PDB: 3w02_A
Probab=31.64 E-value=1.3e+02 Score=26.70 Aligned_cols=65 Identities=17% Similarity=0.194 Sum_probs=43.4
Q ss_pred CeEEEEEecCCCCCChHHHHHHhhcCCCCeEeecCccccCCCChhhHHHHhhhhhhhh-cCCCeeecCCCccc
Q 012895 147 PIEFAIVGDLGQTEWTNSTLDHVGSKDYDVFLLPGDLSYADFQQPLWDSFGRLVEPYA-SSRPWMVTEGNHEI 218 (454)
Q Consensus 147 ~~~f~~igD~~~~~~~~~~l~~i~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~l~-~~~P~~~v~GNHD~ 218 (454)
.+|.+..+|.... ...+.++.+.....|+|++.|.. +-.. +...+.++.+. ..+|++.-+||+|.
T Consensus 11 ~w~h~~~~DPdk~-~~~~~l~~~~~~GtDaI~vGgs~---gvt~---~~~~~~v~~ik~~~~Piil~p~~~~~ 76 (235)
T 3w01_A 11 KWRHIFKLDPAKH-ISDDDLDAICMSQTDAIMIGGTD---DVTE---DNVIHLMSKIRRYPLPLVLEISNIES 76 (235)
T ss_dssp TCCEEEEECTTSC-CCHHHHHHHHTSSCSEEEECCSS---CCCH---HHHHHHHHHHTTSCSCEEEECCCSTT
T ss_pred cceEEEeECCCCc-CCHHHHHHHHHcCCCEEEECCcC---CcCH---HHHHHHHHHhcCcCCCEEEecCCHHH
Confidence 4678888998543 23456777778899999999943 1112 33344444443 35899999999865
No 219
>3s98_A Interferon alpha/beta receptor 1; human, type I interferons, receptor chain, ifnar1, fibronect III, type I interferon receptor chain; HET: NAG; 1.90A {Homo sapiens}
Probab=31.49 E-value=1.2e+02 Score=27.62 Aligned_cols=90 Identities=10% Similarity=0.091 Sum_probs=42.8
Q ss_pred CCCCCeeEEEEecCCCcEEEEEEeCCCCCccEEEEeecCCCCceEEEeEeEEEeee-eeecCeEEEEEECC-CCCCCEEE
Q 012895 50 SESDPQQVHISLAAKDYIRVSWITDDKEAESVVEYGKLPGRYNTVATGEHTSYQFF-FYKSGKIHHVKIGP-LEPATTYY 127 (454)
Q Consensus 50 ~~~~p~~v~l~~~~~~~~~v~W~t~~~~~~~~v~y~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~g-L~p~t~Y~ 127 (454)
....|..|.+... .+++.|.|.-......-.|+|...= .......+. ..+.-. .-...-...+.+.+ |.+...|.
T Consensus 202 p~~~P~~v~~~~~-~~s~~l~W~~p~~~~~~~v~~~~gy-~~~~~~~~~-~~W~~~~~c~~~~~~~c~~~~~~~~~~~Y~ 278 (306)
T 3s98_A 202 ELPPPENIEVSVQ-NQNYVLKWDYTYANMTFQVQWLHAF-LKRNPGNHL-YKWKQIPDCENVKTTQCVFPQNVFQKGIYL 278 (306)
T ss_dssp SSCCCEEEEEEEE-TTEEEEEEECSSSSCEEEEEEEEGG-GGSCC-----CCCEECGGGTTBSSSEEEEEGGGSCSSEEE
T ss_pred cCCCCceEEEEEe-cCEEEEEeCCCCCcEEEEEEEehhh-hhccccccc-cCceECCCceeCCCccccCchhhcccCCEE
Confidence 3466777777555 4678999987653333345554210 000000000 000000 00011123455566 34555999
Q ss_pred EEeCc--------cCceeEEECC
Q 012895 128 YRCGG--------RGPEFSFKMP 142 (454)
Q Consensus 128 Yrv~~--------~s~~~~F~T~ 142 (454)
+||.. +++...|.|.
T Consensus 279 ~RV~A~n~~~~s~~s~~~~~~~~ 301 (306)
T 3s98_A 279 LRVQASDGNNTSFWSEEIKFDTE 301 (306)
T ss_dssp EEEEEECSSCBCCCCCCEEEEC-
T ss_pred EEEEEccCCCccccccccccCcc
Confidence 99863 3566778774
No 220
>2yyb_A Hypothetical protein TTHA1606; structural genomics, unknown function; 2.60A {Thermus thermophilus}
Probab=31.08 E-value=82 Score=28.13 Aligned_cols=41 Identities=15% Similarity=0.290 Sum_probs=25.8
Q ss_pred EEEEccccccCCCCCCCCcHHHHHHHHHHHHhcCCcEEEeccccc
Q 012895 295 FVLLHAPWYNTNTAHQGEGESMRNSMEELLYNARVDVVFAGHVHA 339 (454)
Q Consensus 295 Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~ 339 (454)
++++|||++- ..... ......+....+.++++ .+++-|+..
T Consensus 60 lIitHHp~~f-~~~~~--~~~~~~~~i~~li~~~I-~ly~~Ht~l 100 (242)
T 2yyb_A 60 FLIVHHGLFW-GKPFP--IVGHHKRRLETLFQGGI-NLYAAHLPL 100 (242)
T ss_dssp EEEEEECSCS-SCCCC--SCHHHHHHHHHHHHTTC-EEEECSHHH
T ss_pred EEEECCCcCc-Ccccc--cccHHHHHHHHHHHCCC-eEEEeccHH
Confidence 7788999854 33222 22344555556677888 678888865
No 221
>3lqm_A Interleukin-10 receptor subunit beta; IL-10R2, common chain, cytokine, IL-10, IL-22, IL- 28, IL-29, disulfide bond, glycoprotein, membrane; 2.14A {Homo sapiens}
Probab=27.11 E-value=2.4e+02 Score=23.74 Aligned_cols=66 Identities=9% Similarity=0.069 Sum_probs=40.6
Q ss_pred CCeeEEEEecCCCcEEEEEEeCCCCC---ccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEEEEE
Q 012895 53 DPQQVHISLAAKDYIRVSWITDDKEA---ESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTYYYR 129 (454)
Q Consensus 53 ~p~~v~l~~~~~~~~~v~W~t~~~~~---~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Yr 129 (454)
+|+.|.+...+. .+++.|.-+.... .-.|+|..-+ ... ..+.. --...+.|++|.+.+.|..|
T Consensus 4 ~P~nv~~~s~n~-~~iL~W~pp~~~~~~v~Y~V~y~~~~---~w~--~~c~~--------~~~~~c~lt~l~~~~~Y~~r 69 (201)
T 3lqm_A 4 PPENVRMNSVNF-KNILQWESPAFAKGQLTFTAQYLSYR---IFQ--DKCMQ--------TTLTECDFSSLSKYGDHTLR 69 (201)
T ss_dssp CCEEEEEEEETT-EEEEEEECCCCSSSCCEEEEEEEETT---EEE--EEEEE--------ESSSEEECTTSCSSSCEEEE
T ss_pred CCcccEEEEECC-ceEEEECCCCCCCCCeEEEEEEEECC---Ccc--cCcCc--------cCCCEEECCCCccCCCEEEE
Confidence 577777776654 4679998875322 2355565431 111 11111 12356889999999999999
Q ss_pred eCc
Q 012895 130 CGG 132 (454)
Q Consensus 130 v~~ 132 (454)
|..
T Consensus 70 V~A 72 (201)
T 3lqm_A 70 VRA 72 (201)
T ss_dssp EEE
T ss_pred EEE
Confidence 964
No 222
>2fyw_A Conserved hypothetical protein; structural genomics, PSI, midwest CENT structural genomics, MCSG, protein structure initiative; 2.40A {Streptococcus pneumoniae} SCOP: c.135.1.1
Probab=26.68 E-value=1.2e+02 Score=27.49 Aligned_cols=43 Identities=9% Similarity=0.092 Sum_probs=25.4
Q ss_pred EEEEccccccCCCCCCCCcHHHHHHHHHHHHhcCCcEEEeccccc
Q 012895 295 FVLLHAPWYNTNTAHQGEGESMRNSMEELLYNARVDVVFAGHVHA 339 (454)
Q Consensus 295 Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~ 339 (454)
+++.|||++-....... ......+....+.++++ .+++-|+..
T Consensus 62 lIitHHP~~f~~~~~~~-~~~~~~~~i~~li~~~I-~lya~Ht~l 104 (267)
T 2fyw_A 62 LIIVKHAPIFRPIKDLL-ASRPQNQIYIDLIKHDI-AVYVSHTNI 104 (267)
T ss_dssp EEEESSCSCCSCCCCCC-TTSHHHHHHHHHHHTTC-EEEECSHHH
T ss_pred EEEECCccccCCccccc-cCchHHHHHHHHHHCCC-eEEEeeccc
Confidence 78889998643322211 12233455555677888 578888765
No 223
>3vzx_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; 1.54A {Bacillus subtilis} PDB: 3vzy_A* 3vzz_A* 3w00_A* 1viz_A
Probab=26.50 E-value=1.5e+02 Score=26.22 Aligned_cols=65 Identities=12% Similarity=0.128 Sum_probs=43.5
Q ss_pred CeEEEEEecCCCCCChHHHHHHhhcCCCCeEeecCccccCCCChhhHHHHhhhhhhhh-cCCCeeecCCCccc
Q 012895 147 PIEFAIVGDLGQTEWTNSTLDHVGSKDYDVFLLPGDLSYADFQQPLWDSFGRLVEPYA-SSRPWMVTEGNHEI 218 (454)
Q Consensus 147 ~~~f~~igD~~~~~~~~~~l~~i~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~l~-~~~P~~~v~GNHD~ 218 (454)
.+|.+..+|..... ..+.++.+.....|+|++.|-. +-.. +...+.++.+. ..+|++.-|||++.
T Consensus 6 ~w~h~~~iDPdk~~-~~~~~~~~~~~GtD~i~vGGs~---gvt~---~~~~~~v~~ik~~~~Pvvlfp~~~~~ 71 (228)
T 3vzx_A 6 EWKHVFKLDPNKDL-PDEQLEILCESGTDAVIIGGSD---GVTE---DNVLRMMSKVRRFLVPCVLEVSAIEA 71 (228)
T ss_dssp GCCEEEEECTTSCC-CTTHHHHHHTSSCSEEEECCCS---CCCH---HHHHHHHHHHTTSSSCEEEECSCGGG
T ss_pred ceeEEEeECCCCCC-CHHHHHHHHHcCCCEEEECCcC---CCCH---HHHHHHHHHhhccCCCEEEeCCCHHH
Confidence 46778888885532 2356777778899999999932 1112 33444444443 35999999999875
No 224
>2d9q_B Granulocyte colony-stimulating factor receptor; cytokine, ligand-receptor complex, signaling protein-cytokin; HET: NAG; 2.80A {Homo sapiens} SCOP: b.1.1.3 b.1.2.1 b.1.2.1
Probab=24.66 E-value=2.9e+02 Score=24.76 Aligned_cols=79 Identities=8% Similarity=-0.023 Sum_probs=41.9
Q ss_pred CCCCeeEEEEecC-CCcEEEEEEeCCCC---CccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECCCCCCCEE
Q 012895 51 ESDPQQVHISLAA-KDYIRVSWITDDKE---AESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGPLEPATTY 126 (454)
Q Consensus 51 ~~~p~~v~l~~~~-~~~~~v~W~t~~~~---~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y 126 (454)
...|..+.....+ .+++++.|...... ..-.|+|......-.... ....... .........+...+|.|.+.|
T Consensus 99 P~~P~~l~c~~~~~~~~~~~~W~~~~~~~~~~~Y~l~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~~~~L~~~~~Y 175 (313)
T 2d9q_B 99 PAIPHNLSCLMNLTTSSLICQWEPGPETHLPTSFTLKSFKSRGNCQTQG-DSILDCV--PKDGQSHCSIPRKHLLLYQNM 175 (313)
T ss_dssp CCCCEEEEEEEETTTTEEEEEEECCSCCSSCCEEEEEEEECCTTSCSCC-CCEEEEC--CCTTCSEEEEEGGGCCSSSCE
T ss_pred CCCCccceeeECCCCccEEEEecCCCCCCCceeEEEEEEecCCCcccCC-cccccCC--CCCCCcEEEECccccccceeE
Confidence 3457777765554 68999999877532 233566654432110000 0000000 001123444555679999999
Q ss_pred EEEeCc
Q 012895 127 YYRCGG 132 (454)
Q Consensus 127 ~Yrv~~ 132 (454)
.+||..
T Consensus 176 ~f~V~A 181 (313)
T 2d9q_B 176 GIWVQA 181 (313)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 999864
No 225
>1nmo_A Hypothetical protein YBGI; toroidal structure, structure 2 project, S2F, structural genomics, unknown function; 2.20A {Escherichia coli} SCOP: c.135.1.1 PDB: 1nmp_A
Probab=23.09 E-value=1.6e+02 Score=26.24 Aligned_cols=42 Identities=14% Similarity=0.262 Sum_probs=24.1
Q ss_pred EEEEccccccCCCCCCCCcHHHHHHHHHHHHhcCCcEEEeccccc
Q 012895 295 FVLLHAPWYNTNTAHQGEGESMRNSMEELLYNARVDVVFAGHVHA 339 (454)
Q Consensus 295 Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~ 339 (454)
++++|||++-......-.. ...+....+.++++ .+++-|+..
T Consensus 59 lIitHHP~~f~~~~~~i~~--~~~~~i~~li~~~I-~ly~~Htnl 100 (247)
T 1nmo_A 59 AVIVHHGYFWKGESPVIRG--MKRNRLKTLLANDI-NLYGWHLPL 100 (247)
T ss_dssp EEEEEECSCCTTSCCCCCT--HHHHHHHHHHHTTC-EEEECCHHH
T ss_pred EEEECCchhccCCCccccc--hHHHHHHHHHHCCC-EEEEeeech
Confidence 7788999854222121222 23455555677788 568888754
No 226
>2nyd_A UPF0135 protein SA1388; hypothetical protein SA1388, selenomethionine SAD, unknown F; 2.00A {Staphylococcus aureus subsp} PDB: 3lnl_A*
Probab=21.97 E-value=1.3e+02 Score=28.89 Aligned_cols=42 Identities=12% Similarity=0.134 Sum_probs=24.5
Q ss_pred EEEEccccccCCCCCCCCcHHHHHHHHHHHHhcCCcEEEeccccc
Q 012895 295 FVLLHAPWYNTNTAHQGEGESMRNSMEELLYNARVDVVFAGHVHA 339 (454)
Q Consensus 295 Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~ 339 (454)
++++|||++=......... .. .+....+-++++ .+++-|+-.
T Consensus 64 lIItHHPlif~~~k~i~~~-~~-~r~i~~li~~~I-alya~HTnl 105 (370)
T 2nyd_A 64 TIISHHPLIFKGVTSLKAN-GY-GLIIRKLIQHDI-NLIAMHTNL 105 (370)
T ss_dssp EEEESSCSSCSCCSCCCSS-TH-HHHHHHHHHTTC-EEEECCHHH
T ss_pred EEEECCCcccCCccccCcC-CH-HHHHHHHHHCCC-eEEEeechh
Confidence 7788998864333222112 22 444455567788 678888754
No 227
>3g9v_A Interleukin 22 receptor, alpha 2; cytokine, cytokine receptor, receptor, glycoprotein, polymorphism, secreted, cytokine/cytokine receptor complex; 2.76A {Homo sapiens}
Probab=20.83 E-value=2.6e+02 Score=23.84 Aligned_cols=71 Identities=14% Similarity=0.136 Sum_probs=42.9
Q ss_pred CCCeeEEEEecCCCcEEEEEEeCCCC----CccEEEEeecCCCCceEEEeEeEEEeeeeeecCeEEEEEECC--CCCCCE
Q 012895 52 SDPQQVHISLAAKDYIRVSWITDDKE----AESVVEYGKLPGRYNTVATGEHTSYQFFFYKSGKIHHVKIGP--LEPATT 125 (454)
Q Consensus 52 ~~p~~v~l~~~~~~~~~v~W~t~~~~----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g--L~p~t~ 125 (454)
..|+.|.+...+.+. ++.|.-.... ..-.|+|...+...+.... .+.. .+ ...+.|+. |.+...
T Consensus 9 p~P~nv~~~s~n~~~-iL~W~p~~~~~~~~~~Y~Vqy~~~~~~~W~~~~-~C~~------i~--~~~Cdlt~~~~~~~~~ 78 (211)
T 3g9v_A 9 LKPQRVQFQSRNFHN-ILQWQPGRALTGNSSVYFVQYKIYGQRQWKNKE-DCWG------TQ--ELSCDLTSETSDIQEP 78 (211)
T ss_dssp CCCEEEEEEEETTEE-EEEEECCCC---CCCEEEEEEEETTCSSCEEEE-EEEE------EC--CSEEECTGGGCSTTSC
T ss_pred CCCceeEEEEEcCce-EEEECCCCCCCCCCeEEEEEEEECCCCceEECc-cCCC------CC--CCEECCCCcccccCcc
Confidence 458888887776655 4999887542 2257888766533333322 2211 11 23566654 478899
Q ss_pred EEEEeCc
Q 012895 126 YYYRCGG 132 (454)
Q Consensus 126 Y~Yrv~~ 132 (454)
|+.||..
T Consensus 79 Y~~RV~A 85 (211)
T 3g9v_A 79 YYGRVRA 85 (211)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 9999864
No 228
>2f6u_A GGGPS, (S)-3-O-geranylgeranylglyceryl phosphate synthase; non-canonical TIM-barrel, prenyltransferase, archaeal lipid synthesis, dimer; HET: CIT; 1.55A {Archaeoglobus fulgidus} SCOP: c.1.4.1 PDB: 2f6x_A*
Probab=20.21 E-value=2.3e+02 Score=25.04 Aligned_cols=64 Identities=16% Similarity=0.196 Sum_probs=44.0
Q ss_pred CCeEEEEEecCCCCCChHHHHHHhhcCCCCeEeecCccccCCCChhhHHHHhhhhhhhhc-CCCeeecCCCc
Q 012895 146 FPIEFAIVGDLGQTEWTNSTLDHVGSKDYDVFLLPGDLSYADFQQPLWDSFGRLVEPYAS-SRPWMVTEGNH 216 (454)
Q Consensus 146 ~~~~f~~igD~~~~~~~~~~l~~i~~~~pd~vl~~GDl~y~~~~~~~~~~~~~~~~~l~~-~~P~~~v~GNH 216 (454)
...+|+..||.... .+.+.++.+.+...|+|.+.| . .+. ..+..++.++.+.. .+|++..+++.
T Consensus 7 ~~~~~it~gDP~~~-~t~~~~~~l~~~GaD~IelG~--S--~g~--t~~~~~~~v~~ir~~~~Pivl~~y~~ 71 (234)
T 2f6u_A 7 RKWRHITKLDPDRT-NTDEIIKAVADSGTDAVMISG--T--QNV--TYEKARTLIEKVSQYGLPIVVEPSDP 71 (234)
T ss_dssp GGCCEEEEECTTSC-CCHHHHHHHHTTTCSEEEECC--C--TTC--CHHHHHHHHHHHTTSCCCEEECCSSC
T ss_pred CcceEEEeeCCCcc-ccHHHHHHHHHcCCCEEEECC--C--CCC--CHHHHHHHHHHhcCCCCCEEEecCCc
Confidence 34789999998654 345677888888999999999 2 221 22444555555543 48999988885
Done!