Query 012898
Match_columns 454
No_of_seqs 332 out of 2745
Neff 7.9
Searched_HMMs 46136
Date Fri Mar 29 07:27:49 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012898.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/012898hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1515 Arylacetamide deacetyl 99.9 1.6E-26 3.5E-31 228.9 20.9 237 175-422 60-335 (336)
2 PRK10162 acetyl esterase; Prov 99.9 3.9E-25 8.4E-30 220.8 22.1 223 188-423 68-316 (318)
3 COG0657 Aes Esterase/lipase [L 99.9 4.2E-24 9E-29 212.7 20.7 232 184-420 59-308 (312)
4 PF07859 Abhydrolase_3: alpha/ 99.9 7.7E-24 1.7E-28 198.2 13.5 190 206-398 1-210 (211)
5 COG1506 DAP2 Dipeptidyl aminop 99.9 2.5E-21 5.4E-26 209.4 18.8 233 179-424 366-618 (620)
6 COG2272 PnbA Carboxylesterase 99.8 3E-21 6.5E-26 195.2 10.5 155 135-294 19-199 (491)
7 PRK10566 esterase; Provisional 99.8 1.3E-18 2.8E-23 166.9 19.8 212 191-422 14-248 (249)
8 PF00326 Peptidase_S9: Prolyl 99.8 6.4E-19 1.4E-23 165.5 14.5 183 224-424 5-211 (213)
9 PLN02298 hydrolase, alpha/beta 99.8 1.8E-17 3.9E-22 166.1 20.5 226 189-424 45-319 (330)
10 PF00135 COesterase: Carboxyle 99.8 1.7E-19 3.6E-24 191.9 5.0 159 135-295 45-228 (535)
11 KOG1455 Lysophospholipase [Lip 99.8 6.7E-18 1.4E-22 161.3 14.6 226 188-422 39-312 (313)
12 PF01738 DLH: Dienelactone hyd 99.8 1.1E-17 2.3E-22 157.9 15.3 196 191-423 3-218 (218)
13 cd00312 Esterase_lipase Estera 99.8 2.3E-18 5E-23 182.0 10.8 156 135-295 16-196 (493)
14 PHA02857 monoglyceride lipase; 99.8 3E-17 6.5E-22 159.9 17.4 222 185-422 9-273 (276)
15 PRK13604 luxD acyl transferase 99.8 3.3E-17 7.1E-22 160.2 17.4 202 184-396 15-244 (307)
16 TIGR02821 fghA_ester_D S-formy 99.7 2.7E-17 5.9E-22 160.9 16.7 211 189-422 27-274 (275)
17 PLN02385 hydrolase; alpha/beta 99.7 6.8E-17 1.5E-21 163.4 18.1 225 189-423 74-346 (349)
18 KOG4627 Kynurenine formamidase 99.7 6.6E-17 1.4E-21 145.4 15.1 197 178-399 45-250 (270)
19 PRK10749 lysophospholipase L2; 99.7 1.2E-16 2.6E-21 160.4 17.0 210 202-422 53-329 (330)
20 PRK11460 putative hydrolase; P 99.7 3.8E-16 8.2E-21 149.1 19.5 180 200-424 13-210 (232)
21 PRK10115 protease 2; Provision 99.7 2.4E-16 5.2E-21 172.0 18.6 229 177-423 415-676 (686)
22 KOG1552 Predicted alpha/beta h 99.7 2.2E-16 4.7E-21 148.1 15.3 200 189-423 47-253 (258)
23 KOG4389 Acetylcholinesterase/B 99.7 1.8E-17 3.9E-22 165.8 7.0 156 135-295 52-238 (601)
24 PLN02442 S-formylglutathione h 99.7 8.9E-16 1.9E-20 150.8 18.4 214 188-422 31-280 (283)
25 PF12695 Abhydrolase_5: Alpha/ 99.7 4.8E-16 1E-20 135.9 14.8 145 205-396 1-145 (145)
26 TIGR01840 esterase_phb esteras 99.7 1.6E-16 3.6E-21 149.3 12.4 173 192-381 2-197 (212)
27 PRK05077 frsA fermentation/res 99.7 1.8E-15 3.9E-20 156.2 18.7 224 179-423 169-413 (414)
28 COG0412 Dienelactone hydrolase 99.7 6.8E-15 1.5E-19 140.5 19.9 198 188-423 13-234 (236)
29 PLN02652 hydrolase; alpha/beta 99.7 4.6E-15 9.9E-20 152.2 18.4 228 180-424 113-389 (395)
30 COG1647 Esterase/lipase [Gener 99.6 1.9E-15 4.1E-20 138.1 12.7 202 204-421 16-243 (243)
31 PRK00870 haloalkane dehalogena 99.6 5.5E-15 1.2E-19 146.1 17.0 223 187-422 30-301 (302)
32 PF02230 Abhydrolase_2: Phosph 99.6 9E-15 2E-19 137.9 16.6 183 200-422 11-215 (216)
33 KOG4391 Predicted alpha/beta h 99.6 1.2E-15 2.7E-20 138.4 10.0 222 179-425 55-285 (300)
34 TIGR03343 biphenyl_bphD 2-hydr 99.6 1E-14 2.2E-19 142.1 16.6 215 191-420 20-281 (282)
35 TIGR02427 protocat_pcaD 3-oxoa 99.6 1.1E-14 2.5E-19 136.9 15.8 203 202-420 12-251 (251)
36 TIGR03611 RutD pyrimidine util 99.6 1.9E-14 4.1E-19 136.6 17.0 204 201-420 11-256 (257)
37 PLN00021 chlorophyllase 99.6 3.9E-14 8.4E-19 140.8 19.2 194 187-401 37-245 (313)
38 KOG1516 Carboxylesterase and r 99.6 1.4E-15 3.1E-20 162.8 9.0 151 134-295 36-215 (545)
39 COG2267 PldB Lysophospholipase 99.6 3E-14 6.4E-19 140.8 16.7 226 187-423 20-295 (298)
40 TIGR02240 PHA_depoly_arom poly 99.6 2.8E-14 6.1E-19 139.2 16.2 208 203-427 25-271 (276)
41 TIGR03056 bchO_mg_che_rel puta 99.6 3.6E-14 7.7E-19 137.2 16.1 211 191-420 16-278 (278)
42 PRK10673 acyl-CoA esterase; Pr 99.6 2.7E-14 5.9E-19 136.8 14.8 206 200-422 13-255 (255)
43 PRK10985 putative hydrolase; P 99.6 8.2E-14 1.8E-18 139.6 17.5 232 179-422 34-320 (324)
44 PLN02965 Probable pheophorbida 99.6 5.2E-14 1.1E-18 135.8 14.9 203 205-421 5-252 (255)
45 PLN02824 hydrolase, alpha/beta 99.6 8.7E-14 1.9E-18 136.9 16.1 204 203-422 29-294 (294)
46 PLN02511 hydrolase 99.5 1.2E-13 2.6E-18 141.7 16.1 232 181-424 76-367 (388)
47 COG0400 Predicted esterase [Ge 99.5 3.6E-13 7.9E-18 125.3 17.6 178 200-422 15-205 (207)
48 PRK03592 haloalkane dehalogena 99.5 2.3E-13 5.1E-18 133.9 16.4 207 203-424 27-291 (295)
49 KOG2281 Dipeptidyl aminopeptid 99.5 1.8E-13 4E-18 140.7 15.6 220 188-421 625-866 (867)
50 TIGR03695 menH_SHCHC 2-succiny 99.5 2.5E-13 5.4E-18 127.3 15.3 90 204-299 2-94 (251)
51 TIGR01250 pro_imino_pep_2 prol 99.5 4.9E-13 1.1E-17 128.8 17.6 201 202-420 24-288 (288)
52 TIGR01738 bioH putative pimelo 99.5 1.8E-13 3.8E-18 128.5 13.8 196 203-419 4-245 (245)
53 PRK11071 esterase YqiA; Provis 99.5 3.2E-13 7E-18 124.9 13.9 182 204-420 2-189 (190)
54 PLN02679 hydrolase, alpha/beta 99.5 6.6E-13 1.4E-17 134.9 17.4 209 202-422 87-357 (360)
55 KOG2100 Dipeptidyl aminopeptid 99.5 6.3E-13 1.4E-17 146.0 18.3 220 189-423 510-748 (755)
56 PRK10349 carboxylesterase BioH 99.5 4E-13 8.7E-18 129.3 14.4 195 204-420 14-254 (256)
57 PRK14875 acetoin dehydrogenase 99.5 5.8E-13 1.3E-17 135.1 15.9 202 201-421 129-370 (371)
58 PLN02894 hydrolase, alpha/beta 99.5 1.1E-12 2.5E-17 135.1 17.9 94 201-300 103-201 (402)
59 PRK06489 hypothetical protein; 99.5 2.9E-12 6.3E-17 130.2 20.4 63 350-423 290-358 (360)
60 PLN03087 BODYGUARD 1 domain co 99.5 2.1E-12 4.6E-17 134.8 19.6 64 350-422 416-479 (481)
61 TIGR01607 PST-A Plasmodium sub 99.5 1E-12 2.2E-17 132.1 16.6 63 352-421 270-332 (332)
62 TIGR03100 hydr1_PEP hydrolase, 99.5 3E-12 6.5E-17 125.2 18.5 110 180-295 4-120 (274)
63 PF12697 Abhydrolase_6: Alpha/ 99.5 8.2E-14 1.8E-18 128.6 6.2 184 206-403 1-222 (228)
64 PF12740 Chlorophyllase2: Chlo 99.5 2.7E-12 5.8E-17 122.5 16.5 190 189-399 4-208 (259)
65 PRK07581 hypothetical protein; 99.4 3.3E-12 7.1E-17 128.5 16.8 63 350-422 273-336 (339)
66 PRK11126 2-succinyl-6-hydroxy- 99.4 2.7E-12 5.9E-17 122.0 15.3 87 203-297 2-88 (242)
67 PF05448 AXE1: Acetyl xylan es 99.4 2.5E-12 5.3E-17 128.2 15.4 223 178-422 56-320 (320)
68 TIGR01836 PHA_synth_III_C poly 99.4 3.6E-12 7.8E-17 129.0 16.7 230 180-422 40-350 (350)
69 PRK03204 haloalkane dehalogena 99.4 2.7E-12 5.9E-17 126.2 14.6 198 203-419 34-285 (286)
70 COG2945 Predicted hydrolase of 99.4 8.8E-12 1.9E-16 111.9 16.1 180 193-420 19-205 (210)
71 PLN02578 hydrolase 99.4 4.4E-12 9.5E-17 128.6 15.5 197 203-420 86-353 (354)
72 TIGR03101 hydr2_PEP hydrolase, 99.4 4.2E-11 9.1E-16 116.2 20.6 222 186-417 8-263 (266)
73 PLN02872 triacylglycerol lipas 99.4 2.5E-11 5.5E-16 124.3 19.8 65 353-423 326-390 (395)
74 COG4099 Predicted peptidase [G 99.4 2.6E-12 5.6E-17 122.0 11.3 173 187-391 172-354 (387)
75 TIGR01249 pro_imino_pep_1 prol 99.4 1.4E-11 3E-16 122.3 17.2 88 203-299 27-119 (306)
76 PLN02211 methyl indole-3-aceta 99.4 1.5E-11 3.2E-16 120.3 16.7 203 201-421 16-269 (273)
77 PF10503 Esterase_phd: Esteras 99.4 5.6E-12 1.2E-16 118.6 11.6 179 190-381 2-198 (220)
78 COG0429 Predicted hydrolase of 99.3 7.5E-11 1.6E-15 114.6 19.0 234 178-423 51-341 (345)
79 PLN03084 alpha/beta hydrolase 99.3 2.9E-11 6.3E-16 123.6 16.7 214 191-421 115-383 (383)
80 KOG4409 Predicted hydrolase/ac 99.3 1.4E-11 3.1E-16 120.2 12.9 208 201-421 88-363 (365)
81 KOG4178 Soluble epoxide hydrol 99.3 4.7E-11 1E-15 116.2 16.2 215 191-422 32-320 (322)
82 PRK08775 homoserine O-acetyltr 99.3 1.7E-11 3.8E-16 123.6 13.2 65 350-423 275-340 (343)
83 KOG2112 Lysophospholipase [Lip 99.3 4.6E-11 1E-15 109.0 14.0 179 204-421 4-203 (206)
84 PRK00175 metX homoserine O-ace 99.3 4.3E-11 9.2E-16 122.6 14.8 69 350-424 307-376 (379)
85 KOG4388 Hormone-sensitive lipa 99.3 2.9E-11 6.2E-16 123.4 13.0 106 190-296 384-490 (880)
86 TIGR01392 homoserO_Ac_trn homo 99.3 1.2E-10 2.6E-15 117.9 17.6 65 350-420 286-351 (351)
87 PRK05371 x-prolyl-dipeptidyl a 99.3 5.5E-10 1.2E-14 123.3 22.9 196 224-425 270-522 (767)
88 KOG1454 Predicted hydrolase/ac 99.3 4.4E-11 9.5E-16 119.7 12.5 207 201-422 56-324 (326)
89 PRK05855 short chain dehydroge 99.3 8.5E-11 1.8E-15 126.2 15.6 62 351-423 232-293 (582)
90 PF10340 DUF2424: Protein of u 99.2 4.3E-10 9.3E-15 112.6 18.9 189 202-398 121-351 (374)
91 PF12715 Abhydrolase_7: Abhydr 99.2 2E-11 4.3E-16 121.5 8.5 120 173-295 83-246 (390)
92 PLN02980 2-oxoglutarate decarb 99.2 2.4E-10 5.2E-15 135.7 18.1 210 202-424 1370-1641(1655)
93 KOG1838 Alpha/beta hydrolase [ 99.2 1.6E-09 3.4E-14 109.0 18.3 233 179-423 96-389 (409)
94 PF06500 DUF1100: Alpha/beta h 99.2 3.7E-10 8E-15 114.2 13.6 216 180-422 169-409 (411)
95 COG3509 LpqC Poly(3-hydroxybut 99.1 1.6E-09 3.5E-14 103.7 16.6 213 188-424 46-309 (312)
96 KOG4667 Predicted esterase [Li 99.1 4.4E-10 9.5E-15 102.5 11.8 196 201-420 31-256 (269)
97 KOG3043 Predicted hydrolase re 99.1 5.9E-10 1.3E-14 102.5 12.6 191 190-422 27-240 (242)
98 PF07224 Chlorophyllase: Chlor 99.1 1.5E-09 3.3E-14 102.0 15.3 193 186-402 30-236 (307)
99 KOG2382 Predicted alpha/beta h 99.1 8.4E-10 1.8E-14 107.5 14.0 206 200-423 49-314 (315)
100 COG3458 Acetyl esterase (deace 99.1 6.3E-10 1.4E-14 104.9 12.3 207 179-397 57-301 (321)
101 PF02129 Peptidase_S15: X-Pro 99.1 4E-10 8.7E-15 110.1 11.0 202 187-396 3-271 (272)
102 PRK10439 enterobactin/ferric e 99.1 5.5E-09 1.2E-13 107.7 18.4 191 188-399 193-394 (411)
103 TIGR00976 /NonD putative hydro 99.1 4E-09 8.6E-14 113.2 18.0 106 187-297 7-119 (550)
104 PF03583 LIP: Secretory lipase 99.1 4.7E-09 1E-13 103.5 16.7 65 353-426 220-285 (290)
105 COG1505 Serine proteases of th 99.0 3.7E-09 8.1E-14 109.4 14.9 228 179-422 395-646 (648)
106 KOG2984 Predicted hydrolase [G 99.0 4E-10 8.7E-15 101.7 6.8 199 205-422 44-276 (277)
107 TIGR01838 PHA_synth_I poly(R)- 99.0 6.6E-09 1.4E-13 109.9 17.1 99 186-291 171-278 (532)
108 PRK07868 acyl-CoA synthetase; 99.0 1.1E-08 2.5E-13 117.0 18.7 71 349-426 294-365 (994)
109 PF05728 UPF0227: Uncharacteri 99.0 1.2E-08 2.5E-13 93.9 14.1 181 206-419 2-186 (187)
110 PF08840 BAAT_C: BAAT / Acyl-C 99.0 5.3E-09 1.1E-13 98.5 12.1 166 255-423 5-211 (213)
111 KOG3101 Esterase D [General fu 99.0 3.1E-09 6.8E-14 96.6 9.6 200 187-401 26-266 (283)
112 PF03403 PAF-AH_p_II: Platelet 98.9 2.6E-08 5.7E-13 101.6 16.3 187 201-424 98-360 (379)
113 PRK06765 homoserine O-acetyltr 98.9 3.3E-08 7.1E-13 101.4 15.7 66 350-421 321-387 (389)
114 KOG2564 Predicted acetyltransf 98.9 2E-08 4.3E-13 95.3 11.8 109 179-297 51-168 (343)
115 PF00756 Esterase: Putative es 98.9 5.5E-09 1.2E-13 100.3 7.7 187 189-398 8-238 (251)
116 COG3208 GrsT Predicted thioest 98.8 5.8E-08 1.3E-12 91.1 13.3 201 205-421 10-235 (244)
117 PF09752 DUF2048: Uncharacteri 98.8 7.8E-08 1.7E-12 95.1 13.9 211 190-420 78-347 (348)
118 COG4188 Predicted dienelactone 98.8 2E-08 4.3E-13 99.6 9.2 106 186-294 49-178 (365)
119 PF06821 Ser_hydrolase: Serine 98.8 7E-08 1.5E-12 87.7 11.4 153 206-396 1-153 (171)
120 PF08538 DUF1749: Protein of u 98.8 4.5E-08 9.7E-13 95.4 10.6 95 202-297 32-130 (303)
121 KOG2237 Predicted serine prote 98.7 2.6E-07 5.7E-12 96.4 15.8 231 180-422 443-705 (712)
122 PF00561 Abhydrolase_1: alpha/ 98.7 2.2E-08 4.8E-13 93.4 7.1 158 234-401 1-219 (230)
123 cd00707 Pancreat_lipase_like P 98.7 1.5E-07 3.2E-12 92.2 10.9 92 200-296 33-133 (275)
124 COG1770 PtrB Protease II [Amin 98.6 1.6E-06 3.6E-11 91.2 17.8 208 178-396 419-656 (682)
125 PF03959 FSH1: Serine hydrolas 98.6 6.6E-07 1.4E-11 84.2 12.2 167 202-396 3-201 (212)
126 KOG3847 Phospholipase A2 (plat 98.5 1.7E-06 3.8E-11 83.3 14.1 191 198-426 113-375 (399)
127 PRK04940 hypothetical protein; 98.5 9.2E-07 2E-11 80.2 11.7 120 275-421 60-179 (180)
128 TIGR01839 PHA_synth_II poly(R) 98.5 5.8E-06 1.3E-10 87.2 18.7 100 187-291 199-304 (560)
129 COG0596 MhpC Predicted hydrola 98.5 3.6E-06 7.8E-11 78.1 15.5 88 203-299 21-112 (282)
130 COG3571 Predicted hydrolase of 98.5 4.5E-06 9.6E-11 73.2 14.4 158 204-396 15-181 (213)
131 KOG2624 Triglyceride lipase-ch 98.5 3E-06 6.4E-11 86.5 14.9 228 185-423 55-399 (403)
132 COG4757 Predicted alpha/beta h 98.4 1.5E-06 3.2E-11 80.7 9.9 188 220-419 44-280 (281)
133 COG0627 Predicted esterase [Ge 98.4 1.2E-06 2.7E-11 86.8 9.9 225 191-423 37-312 (316)
134 TIGR03502 lipase_Pla1_cef extr 98.4 2.3E-06 5.1E-11 93.7 12.6 91 202-295 448-575 (792)
135 PF06057 VirJ: Bacterial virul 98.4 1.1E-05 2.3E-10 73.6 14.1 83 205-296 4-89 (192)
136 TIGR01849 PHB_depoly_PhaZ poly 98.3 1.3E-05 2.8E-10 82.0 15.5 71 349-422 334-406 (406)
137 PF06342 DUF1057: Alpha/beta h 98.3 2.8E-05 6.1E-10 74.7 16.4 93 201-297 33-126 (297)
138 TIGR03230 lipo_lipase lipoprot 98.3 2.9E-06 6.3E-11 87.7 10.2 92 201-296 39-140 (442)
139 COG1073 Hydrolases of the alph 98.3 4.1E-06 8.9E-11 81.2 9.7 66 353-423 233-298 (299)
140 PF06028 DUF915: Alpha/beta hy 98.3 1.3E-05 2.9E-10 77.3 12.8 193 204-420 12-253 (255)
141 PF10230 DUF2305: Uncharacteri 98.2 2.5E-05 5.4E-10 76.1 13.6 92 203-297 2-106 (266)
142 COG2936 Predicted acyl esteras 98.2 2.1E-05 4.4E-10 82.8 13.4 114 180-298 23-147 (563)
143 PF00975 Thioesterase: Thioest 98.2 2.4E-05 5.1E-10 73.8 12.4 87 205-299 2-90 (229)
144 PF12146 Hydrolase_4: Putative 98.1 7.8E-06 1.7E-10 64.4 7.2 55 189-248 4-58 (79)
145 PF05705 DUF829: Eukaryotic pr 98.1 4.8E-05 1E-09 72.8 14.1 63 352-419 178-240 (240)
146 COG3545 Predicted esterase of 98.1 3.3E-05 7.2E-10 69.1 11.8 118 274-422 58-179 (181)
147 COG2382 Fes Enterochelin ester 98.1 4E-05 8.7E-10 74.3 12.9 190 188-399 81-283 (299)
148 PF02273 Acyl_transf_2: Acyl t 98.1 6.3E-05 1.4E-09 70.6 13.3 200 186-396 10-237 (294)
149 PF00151 Lipase: Lipase; Inte 98.1 1E-05 2.2E-10 81.1 8.4 94 200-295 68-170 (331)
150 COG2819 Predicted hydrolase of 98.1 0.00017 3.8E-09 69.0 16.0 121 269-422 131-261 (264)
151 KOG3253 Predicted alpha/beta h 98.0 5.5E-05 1.2E-09 78.8 12.1 168 202-396 175-345 (784)
152 PF11144 DUF2920: Protein of u 97.9 0.00036 7.9E-09 70.6 16.1 139 253-392 163-333 (403)
153 KOG2551 Phospholipase/carboxyh 97.9 4E-05 8.7E-10 71.0 8.3 137 256-426 88-224 (230)
154 PF05677 DUF818: Chlamydia CHL 97.9 8.9E-05 1.9E-09 73.1 11.1 95 201-297 135-237 (365)
155 PF10142 PhoPQ_related: PhoPQ- 97.9 0.00052 1.1E-08 69.5 16.8 221 189-422 50-320 (367)
156 PF12048 DUF3530: Protein of u 97.9 0.00097 2.1E-08 66.4 18.2 204 185-422 69-309 (310)
157 COG4814 Uncharacterized protei 97.8 0.00098 2.1E-08 63.0 16.0 192 206-421 48-286 (288)
158 PF07819 PGAP1: PGAP1-like pro 97.8 0.00013 2.8E-09 69.3 10.3 90 203-295 4-105 (225)
159 COG3243 PhaC Poly(3-hydroxyalk 97.8 0.00035 7.5E-09 70.7 13.6 102 190-299 94-205 (445)
160 PF11339 DUF3141: Protein of u 97.8 0.0013 2.8E-08 68.1 17.9 105 191-300 54-165 (581)
161 COG3150 Predicted esterase [Ge 97.8 0.00048 1E-08 61.1 11.9 184 206-421 2-188 (191)
162 PF01674 Lipase_2: Lipase (cla 97.6 0.00032 6.9E-09 66.1 8.6 85 206-295 4-95 (219)
163 COG2021 MET2 Homoserine acetyl 97.5 0.0021 4.5E-08 64.2 13.8 63 351-421 305-367 (368)
164 PF05057 DUF676: Putative seri 97.3 0.00082 1.8E-08 63.4 8.2 90 202-295 3-98 (217)
165 PF05990 DUF900: Alpha/beta hy 97.1 0.0041 9E-08 59.3 10.3 92 201-296 16-114 (233)
166 PF07519 Tannase: Tannase and 97.1 0.016 3.5E-07 61.1 15.6 68 354-425 355-430 (474)
167 COG3946 VirJ Type IV secretory 97.0 0.019 4.1E-07 57.9 14.7 79 205-292 262-343 (456)
168 PF07082 DUF1350: Protein of u 96.9 0.037 8.1E-07 52.7 14.7 208 205-423 18-233 (250)
169 KOG3975 Uncharacterized conser 96.7 0.029 6.2E-07 53.2 12.3 88 201-295 27-130 (301)
170 COG4782 Uncharacterized protei 96.7 0.019 4.2E-07 57.2 11.4 92 201-299 114-215 (377)
171 COG3319 Thioesterase domains o 96.6 0.0067 1.5E-07 58.6 7.4 82 204-297 1-87 (257)
172 PF08386 Abhydrolase_4: TAP-li 96.5 0.0068 1.5E-07 50.2 6.4 62 352-423 34-95 (103)
173 PF03096 Ndr: Ndr family; Int 96.2 0.13 2.7E-06 50.2 14.0 214 190-421 10-278 (283)
174 PF05577 Peptidase_S28: Serine 96.2 0.016 3.4E-07 60.5 8.4 95 202-299 28-137 (434)
175 PLN02733 phosphatidylcholine-s 95.9 0.045 9.7E-07 57.1 9.9 73 219-297 107-184 (440)
176 KOG4840 Predicted hydrolases o 95.9 0.094 2E-06 49.0 10.5 86 204-294 37-126 (299)
177 KOG1551 Uncharacterized conser 95.8 0.052 1.1E-06 51.8 8.9 60 354-423 308-367 (371)
178 PTZ00472 serine carboxypeptida 95.7 0.018 4E-07 60.5 6.2 64 353-422 365-459 (462)
179 KOG1553 Predicted alpha/beta h 95.7 0.015 3.3E-07 57.3 5.0 94 202-300 242-336 (517)
180 KOG3724 Negative regulator of 95.5 0.32 7E-06 53.1 14.4 88 205-295 91-202 (973)
181 COG4947 Uncharacterized protei 95.4 0.097 2.1E-06 46.9 8.5 172 200-396 24-215 (227)
182 PLN02633 palmitoyl protein thi 95.4 0.24 5.2E-06 48.8 12.1 91 202-298 25-117 (314)
183 KOG2931 Differentiation-relate 95.4 0.32 6.9E-06 47.4 12.6 216 191-422 34-306 (326)
184 KOG2521 Uncharacterized conser 95.2 0.6 1.3E-05 47.1 14.4 68 354-426 227-294 (350)
185 PRK10252 entF enterobactin syn 95.0 0.056 1.2E-06 64.1 8.0 86 203-296 1068-1154(1296)
186 PF11288 DUF3089: Protein of u 94.8 0.1 2.3E-06 48.6 7.3 60 233-296 45-116 (207)
187 PF11187 DUF2974: Protein of u 94.6 0.61 1.3E-05 44.2 12.3 37 256-295 68-104 (224)
188 COG1075 LipA Predicted acetylt 94.5 0.068 1.5E-06 53.9 5.8 86 205-297 61-149 (336)
189 PF02450 LCAT: Lecithin:choles 93.9 0.2 4.3E-06 51.6 8.1 69 221-296 66-140 (389)
190 PF01764 Lipase_3: Lipase (cla 93.9 0.12 2.6E-06 44.5 5.4 37 259-297 50-86 (140)
191 KOG2183 Prolylcarboxypeptidase 93.7 0.76 1.6E-05 46.9 11.3 88 203-297 81-189 (492)
192 PF01083 Cutinase: Cutinase; 93.1 0.75 1.6E-05 42.0 9.7 89 205-295 7-101 (179)
193 COG4287 PqaA PhoPQ-activated p 93.0 0.86 1.9E-05 45.8 10.2 200 189-396 110-370 (507)
194 PF02089 Palm_thioest: Palmito 92.8 0.32 6.9E-06 47.4 6.9 96 201-297 4-102 (279)
195 KOG2541 Palmitoyl protein thio 92.3 1.1 2.4E-05 43.2 9.6 87 203-295 24-112 (296)
196 cd00741 Lipase Lipase. Lipase 92.2 0.4 8.7E-06 42.2 6.4 24 273-296 26-49 (153)
197 PLN02517 phosphatidylcholine-s 91.0 1 2.2E-05 48.3 8.7 96 223-323 159-262 (642)
198 KOG3967 Uncharacterized conser 90.7 1.6 3.5E-05 40.7 8.6 92 201-297 99-212 (297)
199 PLN02408 phospholipase A1 90.3 0.43 9.4E-06 48.3 5.1 36 261-296 186-221 (365)
200 PF00450 Peptidase_S10: Serine 90.3 2 4.4E-05 44.0 10.3 62 353-420 331-414 (415)
201 PLN02454 triacylglycerol lipas 89.9 0.52 1.1E-05 48.5 5.3 35 262-296 215-249 (414)
202 PLN02761 lipase class 3 family 89.8 1.7 3.7E-05 45.9 9.0 37 260-296 275-315 (527)
203 PF10605 3HBOH: 3HB-oligomer h 89.7 0.52 1.1E-05 50.2 5.3 72 353-424 556-639 (690)
204 KOG2369 Lecithin:cholesterol a 89.2 1.2 2.6E-05 46.3 7.3 72 221-297 125-204 (473)
205 cd00519 Lipase_3 Lipase (class 88.7 0.91 2E-05 42.8 5.9 23 274-296 127-149 (229)
206 TIGR03712 acc_sec_asp2 accesso 88.6 4.4 9.5E-05 42.4 10.9 88 201-295 287-377 (511)
207 PLN02571 triacylglycerol lipas 88.2 0.75 1.6E-05 47.4 5.1 21 276-296 227-247 (413)
208 smart00824 PKS_TE Thioesterase 87.7 1.7 3.6E-05 39.2 6.8 74 218-297 11-86 (212)
209 PLN02802 triacylglycerol lipas 87.6 0.82 1.8E-05 48.0 5.1 37 260-296 315-351 (509)
210 PLN02324 triacylglycerol lipas 87.4 0.89 1.9E-05 46.8 5.1 22 275-296 215-236 (415)
211 PF03283 PAE: Pectinacetyleste 86.3 4.4 9.4E-05 41.3 9.4 40 253-295 137-176 (361)
212 PLN02753 triacylglycerol lipas 86.2 1.1 2.4E-05 47.3 5.1 38 259-296 293-333 (531)
213 COG2939 Carboxypeptidase C (ca 85.3 2.5 5.5E-05 44.3 7.1 45 251-295 174-218 (498)
214 PLN02310 triacylglycerol lipas 84.9 1.4 3E-05 45.3 5.0 21 275-295 209-229 (405)
215 PLN03016 sinapoylglucose-malat 84.4 2.9 6.3E-05 43.7 7.3 63 353-422 348-431 (433)
216 PLN02606 palmitoyl-protein thi 83.6 6 0.00013 39.1 8.6 91 202-298 26-118 (306)
217 PLN02719 triacylglycerol lipas 83.4 1.8 3.9E-05 45.7 5.1 37 260-296 280-319 (518)
218 PLN03037 lipase class 3 family 83.0 1.8 4E-05 45.6 5.0 22 275-296 318-339 (525)
219 KOG2182 Hydrolytic enzymes of 82.5 13 0.00028 39.0 10.9 98 201-301 84-198 (514)
220 COG3673 Uncharacterized conser 81.6 17 0.00037 36.1 10.7 90 200-293 28-140 (423)
221 PF06850 PHB_depo_C: PHB de-po 81.5 2.5 5.4E-05 39.0 4.7 67 353-422 135-202 (202)
222 PLN00413 triacylglycerol lipas 81.4 2.9 6.3E-05 43.8 5.7 22 274-295 283-304 (479)
223 PF08237 PE-PPE: PE-PPE domain 80.8 6.4 0.00014 37.3 7.5 63 233-298 2-71 (225)
224 PLN02934 triacylglycerol lipas 80.4 3.3 7.1E-05 43.7 5.7 21 275-295 321-341 (515)
225 PLN02209 serine carboxypeptida 79.5 6.9 0.00015 41.0 7.9 63 353-422 352-435 (437)
226 KOG1282 Serine carboxypeptidas 78.7 8.6 0.00019 40.3 8.2 65 353-423 364-449 (454)
227 PLN02162 triacylglycerol lipas 78.0 4 8.7E-05 42.6 5.5 22 274-295 277-298 (475)
228 PLN02847 triacylglycerol lipas 78.0 2.8 6.1E-05 45.0 4.4 21 275-295 251-271 (633)
229 KOG4569 Predicted lipase [Lipi 73.7 4.6 0.0001 40.7 4.6 22 275-296 171-192 (336)
230 KOG2565 Predicted hydrolases o 72.2 15 0.00033 37.2 7.6 108 190-302 138-256 (469)
231 PF03991 Prion_octapep: Copper 64.7 3 6.5E-05 18.0 0.4 6 210-215 2-7 (8)
232 PF09994 DUF2235: Uncharacteri 63.4 48 0.0011 32.3 9.3 38 253-294 74-111 (277)
233 PTZ00472 serine carboxypeptida 61.0 13 0.00029 39.2 5.1 96 197-295 71-191 (462)
234 PF12146 Hydrolase_4: Putative 60.3 29 0.00062 26.9 5.7 62 354-420 18-79 (79)
235 PF05277 DUF726: Protein of un 60.3 28 0.0006 35.3 6.9 71 273-365 218-288 (345)
236 PF06259 Abhydrolase_8: Alpha/ 57.4 1.5E+02 0.0032 27.0 10.6 23 273-295 107-129 (177)
237 PLN02213 sinapoylglucose-malat 57.2 25 0.00053 35.1 6.1 63 353-422 234-317 (319)
238 KOG4540 Putative lipase essent 56.0 16 0.00035 35.7 4.3 22 275-296 276-297 (425)
239 COG5153 CVT17 Putative lipase 56.0 16 0.00035 35.7 4.3 22 275-296 276-297 (425)
240 PF10081 Abhydrolase_9: Alpha/ 55.8 42 0.0009 32.9 7.0 80 211-293 42-127 (289)
241 PF00450 Peptidase_S10: Serine 53.9 10 0.00023 38.7 2.9 103 192-295 28-156 (415)
242 KOG1282 Serine carboxypeptidas 53.9 30 0.00066 36.3 6.2 34 259-295 155-188 (454)
243 KOG4372 Predicted alpha/beta h 51.3 14 0.0003 37.8 3.2 84 200-292 77-167 (405)
244 PLN02209 serine carboxypeptida 49.9 42 0.0009 35.2 6.6 41 255-295 146-187 (437)
245 PLN03016 sinapoylglucose-malat 49.6 41 0.00089 35.2 6.5 38 258-295 147-185 (433)
246 KOG2872 Uroporphyrinogen decar 47.8 60 0.0013 31.9 6.6 34 200-243 249-282 (359)
247 TIGR00632 vsr DNA mismatch end 45.6 30 0.00065 29.3 3.8 44 191-239 49-113 (117)
248 COG4553 DepA Poly-beta-hydroxy 45.5 22 0.00048 34.9 3.4 70 354-426 341-411 (415)
249 COG3340 PepE Peptidase E [Amin 44.6 48 0.001 31.1 5.3 41 202-242 31-71 (224)
250 PF12122 DUF3582: Protein of u 44.1 99 0.0022 25.4 6.6 56 368-426 10-65 (101)
251 PF06500 DUF1100: Alpha/beta h 43.0 30 0.00065 35.8 4.1 66 353-423 190-256 (411)
252 PF04083 Abhydro_lipase: Parti 42.6 56 0.0012 24.3 4.5 27 185-211 19-51 (63)
253 PRK05282 (alpha)-aspartyl dipe 39.6 1.1E+02 0.0024 29.2 7.1 40 203-242 31-70 (233)
254 KOG2029 Uncharacterized conser 36.8 1.1E+02 0.0024 33.2 7.1 25 272-296 523-547 (697)
255 PF05576 Peptidase_S37: PS-10 35.2 27 0.0006 36.0 2.4 63 352-421 351-413 (448)
256 PF12242 Eno-Rase_NADH_b: NAD( 34.5 92 0.002 24.3 4.6 42 252-295 19-60 (78)
257 COG3727 Vsr DNA G:T-mismatch r 30.6 64 0.0014 27.8 3.5 37 203-239 57-114 (150)
258 COG0431 Predicted flavoprotein 27.5 1.3E+02 0.0028 27.3 5.3 64 221-295 57-121 (184)
259 TIGR02690 resist_ArsH arsenica 26.8 1.4E+02 0.003 28.2 5.5 59 223-289 82-142 (219)
260 COG4425 Predicted membrane pro 24.4 2.2E+02 0.0047 30.0 6.6 76 208-289 327-411 (588)
261 PF00326 Peptidase_S9: Prolyl 24.4 2.8E+02 0.0061 25.1 7.2 67 202-268 143-211 (213)
262 KOG4127 Renal dipeptidase [Pos 24.2 2.2E+02 0.0048 28.9 6.4 77 204-285 267-345 (419)
263 cd07224 Pat_like Patatin-like 23.8 93 0.002 29.4 3.8 34 259-296 17-50 (233)
264 PF14714 KH_dom-like: KH-domai 23.4 2.1E+02 0.0046 22.2 5.1 40 349-388 35-78 (80)
265 PRK10673 acyl-CoA esterase; Pr 23.3 3.8E+02 0.0082 24.6 8.0 62 352-421 16-77 (255)
266 TIGR01250 pro_imino_pep_2 prol 23.3 3.7E+02 0.0079 24.7 7.9 67 353-421 26-92 (288)
267 TIGR03100 hydr1_PEP hydrolase, 23.1 3.8E+02 0.0082 25.6 8.0 42 353-396 27-69 (274)
268 COG3101 Uncharacterized protei 22.7 1.7E+02 0.0036 25.7 4.6 20 192-211 31-50 (180)
No 1
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=99.95 E-value=1.6e-26 Score=228.90 Aligned_cols=237 Identities=23% Similarity=0.341 Sum_probs=181.7
Q ss_pred cceeeceeccCCCCeeEEEEeeCCCC--CCCcEEEEEcCCCccCCcc--cchhHHHHHHHhC-CcEEEEEecCCCCCCCh
Q 012898 175 SQVRRGIVYGDQPRNRLDLYFPKSSD--GPKPVVAFITGGAWIIGYK--AWGSLLGQQLSER-DIIVACIDYRNFPQGTI 249 (454)
Q Consensus 175 ~~~~~~v~y~~~~~~~l~vy~P~~~~--~~~Pvvv~~HGgg~~~g~~--~~~~~~~~~la~~-G~~Vv~~dyr~~~~~~~ 249 (454)
...++++.+.....+.+++|+|.... .+.|+|||||||||+.|+. ..+..++.++++. +.+||++|||+.|+..+
T Consensus 60 ~v~~~dv~~~~~~~l~vRly~P~~~~~~~~~p~lvyfHGGGf~~~S~~~~~y~~~~~~~a~~~~~vvvSVdYRLAPEh~~ 139 (336)
T KOG1515|consen 60 GVTSKDVTIDPFTNLPVRLYRPTSSSSETKLPVLVYFHGGGFCLGSANSPAYDSFCTRLAAELNCVVVSVDYRLAPEHPF 139 (336)
T ss_pred CceeeeeEecCCCCeEEEEEcCCCCCcccCceEEEEEeCCccEeCCCCCchhHHHHHHHHHHcCeEEEecCcccCCCCCC
Confidence 44578899999999999999998643 5799999999999999974 4566788888766 99999999999999999
Q ss_pred hHHHHHHHHHHHHHHHh-hhhcCCCCCcEEEEEcCchHHHHHHHHHHHHHhhhCCCCCcccchhhhhhhccccCC-----
Q 012898 250 KDMVKDASQGISFVCNN-ISEYGGDPDRIYLMGQSAGAHIAACTLLEQAIKETGEGESTTWSVSQIRAYFGLSGG----- 323 (454)
Q Consensus 250 ~~~~~D~~~al~~l~~~-~~~~g~d~~rI~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~~i~~~~~~~g~----- 323 (454)
|..++|...|+.|+.++ ...++.|++||+|+|+|+||++|..++.+..... . ....+++.+.+...
T Consensus 140 Pa~y~D~~~Al~w~~~~~~~~~~~D~~rv~l~GDSaGGNia~~va~r~~~~~-~-------~~~ki~g~ili~P~~~~~~ 211 (336)
T KOG1515|consen 140 PAAYDDGWAALKWVLKNSWLKLGADPSRVFLAGDSAGGNIAHVVAQRAADEK-L-------SKPKIKGQILIYPFFQGTD 211 (336)
T ss_pred CccchHHHHHHHHHHHhHHHHhCCCcccEEEEccCccHHHHHHHHHHHhhcc-C-------CCcceEEEEEEecccCCCC
Confidence 99999999999999998 7788999999999999999999999998755332 0 11222222222111
Q ss_pred -----------------CCCChhhhhcCCcccc--cCCCcc---------ccccCCCCCEEEEEeCCCCCCChHHHHHHH
Q 012898 324 -----------------IMDGEESLRQYSPEVL--VQDPNT---------RHAVSLLPPIILFHGTADYSIPADASKNFA 375 (454)
Q Consensus 324 -----------------~~~~~~~~~~~~p~~~--~~~~~~---------~~~~~~~pPvLiihGe~D~~Vp~~~s~~l~ 375 (454)
.......|..+.|... ...+.. ......+||+|++.++.|.+ .+++..++
T Consensus 212 ~~~~e~~~~~~~~~~~~~~~~~~~w~~~lP~~~~~~~~p~~np~~~~~~~d~~~~~lp~tlv~~ag~D~L--~D~~~~Y~ 289 (336)
T KOG1515|consen 212 RTESEKQQNLNGSPELARPKIDKWWRLLLPNGKTDLDHPFINPVGNSLAKDLSGLGLPPTLVVVAGYDVL--RDEGLAYA 289 (336)
T ss_pred CCCHHHHHhhcCCcchhHHHHHHHHHHhCCCCCCCcCCccccccccccccCccccCCCceEEEEeCchhh--hhhhHHHH
Confidence 0001122222333332 111111 12345678999999999966 79999999
Q ss_pred HHHHHcCCCEEEEEeCCCCccccccCCCCCCcHHHHHHHHHHHHHhc
Q 012898 376 NTLQRVGVRAESILYEGKTHTDLFLQDPMRGGKDDMFEDIVAIIHAD 422 (454)
Q Consensus 376 ~~l~~~g~~vel~~~~g~~H~~~~l~~p~~~~~~~~~~~i~~Fl~~~ 422 (454)
++|++.|+++++++++++.|+ +++.++..+...+.++.+.+||++.
T Consensus 290 ~~Lkk~Gv~v~~~~~e~~~H~-~~~~~~~~~~a~~~~~~i~~fi~~~ 335 (336)
T KOG1515|consen 290 EKLKKAGVEVTLIHYEDGFHG-FHILDPSSKEAHALMDAIVEFIKSN 335 (336)
T ss_pred HHHHHcCCeEEEEEECCCeeE-EEecCCchhhHHHHHHHHHHHHhhc
Confidence 999999999999999999999 4455566678889999999999864
No 2
>PRK10162 acetyl esterase; Provisional
Probab=99.94 E-value=3.9e-25 Score=220.76 Aligned_cols=223 Identities=21% Similarity=0.276 Sum_probs=164.3
Q ss_pred CeeEEEEeeCCCCCCCcEEEEEcCCCccCCcccchhHHHHHHHhC-CcEEEEEecCCCCCCChhHHHHHHHHHHHHHHHh
Q 012898 188 RNRLDLYFPKSSDGPKPVVAFITGGAWIIGYKAWGSLLGQQLSER-DIIVACIDYRNFPQGTIKDMVKDASQGISFVCNN 266 (454)
Q Consensus 188 ~~~l~vy~P~~~~~~~Pvvv~~HGgg~~~g~~~~~~~~~~~la~~-G~~Vv~~dyr~~~~~~~~~~~~D~~~al~~l~~~ 266 (454)
.+.+++|.|.. .+.|+|||+|||||..|+...+..+++.|++. |+.|+++|||+.++..++..++|+.++++|+.++
T Consensus 68 ~i~~~~y~P~~--~~~p~vv~~HGGg~~~g~~~~~~~~~~~la~~~g~~Vv~vdYrlape~~~p~~~~D~~~a~~~l~~~ 145 (318)
T PRK10162 68 QVETRLYYPQP--DSQATLFYLHGGGFILGNLDTHDRIMRLLASYSGCTVIGIDYTLSPEARFPQAIEEIVAVCCYFHQH 145 (318)
T ss_pred ceEEEEECCCC--CCCCEEEEEeCCcccCCCchhhhHHHHHHHHHcCCEEEEecCCCCCCCCCCCcHHHHHHHHHHHHHh
Confidence 47899999964 34699999999999999888777888999885 9999999999999999999999999999999999
Q ss_pred hhhcCCCCCcEEEEEcCchHHHHHHHHHHHHHhhhCCCCCcccchhhhhhhccccCC--------------CC--CChhh
Q 012898 267 ISEYGGDPDRIYLMGQSAGAHIAACTLLEQAIKETGEGESTTWSVSQIRAYFGLSGG--------------IM--DGEES 330 (454)
Q Consensus 267 ~~~~g~d~~rI~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~~i~~~~~~~g~--------------~~--~~~~~ 330 (454)
.+++++|++||+|+|+|+||++++.++......... ...+.+.+.+++. .. .....
T Consensus 146 ~~~~~~d~~~i~l~G~SaGG~la~~~a~~~~~~~~~--------~~~~~~~vl~~p~~~~~~~~s~~~~~~~~~~l~~~~ 217 (318)
T PRK10162 146 AEDYGINMSRIGFAGDSAGAMLALASALWLRDKQID--------CGKVAGVLLWYGLYGLRDSVSRRLLGGVWDGLTQQD 217 (318)
T ss_pred HHHhCCChhHEEEEEECHHHHHHHHHHHHHHhcCCC--------ccChhheEEECCccCCCCChhHHHhCCCccccCHHH
Confidence 999999999999999999999999988764332110 0011111111110 00 00000
Q ss_pred ----hhcCCcccc-cCCCc---ccccc-CCCCCEEEEEeCCCCCCChHHHHHHHHHHHHcCCCEEEEEeCCCCccccccC
Q 012898 331 ----LRQYSPEVL-VQDPN---TRHAV-SLLPPIILFHGTADYSIPADASKNFANTLQRVGVRAESILYEGKTHTDLFLQ 401 (454)
Q Consensus 331 ----~~~~~p~~~-~~~~~---~~~~~-~~~pPvLiihGe~D~~Vp~~~s~~l~~~l~~~g~~vel~~~~g~~H~~~~l~ 401 (454)
+..+..... ..++. ..... ..+||++|++|+.|.+ .++++.|+++|++.|+++++++++|..|++..+.
T Consensus 218 ~~~~~~~y~~~~~~~~~p~~~p~~~~l~~~lPp~~i~~g~~D~L--~de~~~~~~~L~~aGv~v~~~~~~g~~H~f~~~~ 295 (318)
T PRK10162 218 LQMYEEAYLSNDADRESPYYCLFNNDLTRDVPPCFIAGAEFDPL--LDDSRLLYQTLAAHQQPCEFKLYPGTLHAFLHYS 295 (318)
T ss_pred HHHHHHHhCCCccccCCcccCcchhhhhcCCCCeEEEecCCCcC--cChHHHHHHHHHHcCCCEEEEEECCCceehhhcc
Confidence 111111000 00111 11223 5679999999999987 5799999999999999999999999999955433
Q ss_pred CCCCCcHHHHHHHHHHHHHhcC
Q 012898 402 DPMRGGKDDMFEDIVAIIHADD 423 (454)
Q Consensus 402 ~p~~~~~~~~~~~i~~Fl~~~~ 423 (454)
+..+...+.++.+.+||++..
T Consensus 296 -~~~~~a~~~~~~~~~~l~~~~ 316 (318)
T PRK10162 296 -RMMDTADDALRDGAQFFTAQL 316 (318)
T ss_pred -CchHHHHHHHHHHHHHHHHHh
Confidence 334567889999999998753
No 3
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=99.92 E-value=4.2e-24 Score=212.70 Aligned_cols=232 Identities=23% Similarity=0.322 Sum_probs=161.6
Q ss_pred cCCCCeeEEEEee-CCCCCCCcEEEEEcCCCccCCcccchhHHHHHHH-hCCcEEEEEecCCCCCCChhHHHHHHHHHHH
Q 012898 184 GDQPRNRLDLYFP-KSSDGPKPVVAFITGGAWIIGYKAWGSLLGQQLS-ERDIIVACIDYRNFPQGTIKDMVKDASQGIS 261 (454)
Q Consensus 184 ~~~~~~~l~vy~P-~~~~~~~Pvvv~~HGgg~~~g~~~~~~~~~~~la-~~G~~Vv~~dyr~~~~~~~~~~~~D~~~al~ 261 (454)
.......+++|.| .....+.|+|||+|||||..|+...+...+..++ ..|+.|+++|||+.++..+|..++|+.++++
T Consensus 59 ~~~~~~~~~~y~p~~~~~~~~p~vly~HGGg~~~g~~~~~~~~~~~~~~~~g~~vv~vdYrlaPe~~~p~~~~d~~~a~~ 138 (312)
T COG0657 59 PSGDGVPVRVYRPDRKAAATAPVVLYLHGGGWVLGSLRTHDALVARLAAAAGAVVVSVDYRLAPEHPFPAALEDAYAAYR 138 (312)
T ss_pred CCCCceeEEEECCCCCCCCCCcEEEEEeCCeeeecChhhhHHHHHHHHHHcCCEEEecCCCCCCCCCCCchHHHHHHHHH
Confidence 3444577999999 2344568999999999999999988855555555 5599999999999999999999999999999
Q ss_pred HHHHhhhhcCCCCCcEEEEEcCchHHHHHHHHHHHHHhhhCCCC--Ccccchhhh---hhhccccCC-CCCChh-----h
Q 012898 262 FVCNNISEYGGDPDRIYLMGQSAGAHIAACTLLEQAIKETGEGE--STTWSVSQI---RAYFGLSGG-IMDGEE-----S 330 (454)
Q Consensus 262 ~l~~~~~~~g~d~~rI~l~G~S~GG~la~~~a~~~~~~~~~~~~--~~~~~~~~i---~~~~~~~g~-~~~~~~-----~ 330 (454)
|+.++..++|+|+++|+|+|+|+||++++.++....++...... ...+..... ...+...+. ...... .
T Consensus 139 ~l~~~~~~~g~dp~~i~v~GdSAGG~La~~~a~~~~~~~~~~p~~~~li~P~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (312)
T COG0657 139 WLRANAAELGIDPSRIAVAGDSAGGHLALALALAARDRGLPLPAAQVLISPLLDLTSSAASLPGYGEADLLDAAAILAWF 218 (312)
T ss_pred HHHhhhHhhCCCccceEEEecCcccHHHHHHHHHHHhcCCCCceEEEEEecccCCcccccchhhcCCccccCHHHHHHHH
Confidence 99999999999999999999999999999998876544111100 000000000 111111110 000101 1
Q ss_pred hhcCCcccc-----cCCCccccccCCCCCEEEEEeCCCCCCChHHHHHHHHHHHHcCCCEEEEEeCCCCccccccCCCCC
Q 012898 331 LRQYSPEVL-----VQDPNTRHAVSLLPPIILFHGTADYSIPADASKNFANTLQRVGVRAESILYEGKTHTDLFLQDPMR 405 (454)
Q Consensus 331 ~~~~~p~~~-----~~~~~~~~~~~~~pPvLiihGe~D~~Vp~~~s~~l~~~l~~~g~~vel~~~~g~~H~~~~l~~p~~ 405 (454)
...+..... ...+........+||+++++|+.|.+. .+++.++++|++.|++++++.++|+.|.+.....
T Consensus 219 ~~~~~~~~~~~~~p~~spl~~~~~~~lPP~~i~~a~~D~l~--~~~~~~a~~L~~agv~~~~~~~~g~~H~f~~~~~--- 293 (312)
T COG0657 219 ADLYLGAAPDREDPEASPLASDDLSGLPPTLIQTAEFDPLR--DEGEAYAERLRAAGVPVELRVYPGMIHGFDLLTG--- 293 (312)
T ss_pred HHHhCcCccccCCCccCccccccccCCCCEEEEecCCCcch--hHHHHHHHHHHHcCCeEEEEEeCCcceeccccCc---
Confidence 111111100 011111121344899999999999884 5999999999999999999999999997543332
Q ss_pred CcHHHHHHHHHHHHH
Q 012898 406 GGKDDMFEDIVAIIH 420 (454)
Q Consensus 406 ~~~~~~~~~i~~Fl~ 420 (454)
....+.+..+.+|++
T Consensus 294 ~~a~~~~~~~~~~l~ 308 (312)
T COG0657 294 PEARSALRQIAAFLR 308 (312)
T ss_pred HHHHHHHHHHHHHHH
Confidence 355666788888887
No 4
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=99.91 E-value=7.7e-24 Score=198.25 Aligned_cols=190 Identities=27% Similarity=0.471 Sum_probs=130.9
Q ss_pred EEEEcCCCccCCcccchhHHHHHHHh-CCcEEEEEecCCCCCCChhHHHHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCc
Q 012898 206 VAFITGGAWIIGYKAWGSLLGQQLSE-RDIIVACIDYRNFPQGTIKDMVKDASQGISFVCNNISEYGGDPDRIYLMGQSA 284 (454)
Q Consensus 206 vv~~HGgg~~~g~~~~~~~~~~~la~-~G~~Vv~~dyr~~~~~~~~~~~~D~~~al~~l~~~~~~~g~d~~rI~l~G~S~ 284 (454)
|||||||||+.|+......++..+++ .|++|+++|||++++..+++.++|+.++++|+.+++.++++|+++|+|+|+|+
T Consensus 1 v~~~HGGg~~~g~~~~~~~~~~~la~~~g~~v~~~~Yrl~p~~~~p~~~~D~~~a~~~l~~~~~~~~~d~~~i~l~G~SA 80 (211)
T PF07859_consen 1 VVYIHGGGWVMGSKESHWPFAARLAAERGFVVVSIDYRLAPEAPFPAALEDVKAAYRWLLKNADKLGIDPERIVLIGDSA 80 (211)
T ss_dssp EEEE--STTTSCGTTTHHHHHHHHHHHHTSEEEEEE---TTTSSTTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETH
T ss_pred CEEECCcccccCChHHHHHHHHHHHhhccEEEEEeeccccccccccccccccccceeeeccccccccccccceEEeeccc
Confidence 79999999999999888888888887 69999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHhhh---CC-CCCcccc----h--hhhh-hhccccCCCCCChhh----hhcCCcccccCCC---ccc
Q 012898 285 GAHIAACTLLEQAIKET---GE-GESTTWS----V--SQIR-AYFGLSGGIMDGEES----LRQYSPEVLVQDP---NTR 346 (454)
Q Consensus 285 GG~la~~~a~~~~~~~~---~~-~~~~~~~----~--~~i~-~~~~~~g~~~~~~~~----~~~~~p~~~~~~~---~~~ 346 (454)
||++++.++........ .. .....+. . .... ......+... .... +..+.+......+ .+.
T Consensus 81 Gg~la~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~sp~~ 159 (211)
T PF07859_consen 81 GGHLALSLALRARDRGLPKPKGIILISPWTDLQDFDGPSYDDSNENKDDPFL-PAPKIDWFWKLYLPGSDRDDPLASPLN 159 (211)
T ss_dssp HHHHHHHHHHHHHHTTTCHESEEEEESCHSSTSTSSCHHHHHHHHHSTTSSS-BHHHHHHHHHHHHSTGGTTSTTTSGGG
T ss_pred ccchhhhhhhhhhhhcccchhhhhcccccccchhcccccccccccccccccc-ccccccccccccccccccccccccccc
Confidence 99999999977554421 10 0000000 0 0000 0000011011 0111 1111111111111 111
Q ss_pred c-ccCCCCCEEEEEeCCCCCCChHHHHHHHHHHHHcCCCEEEEEeCCCCcccc
Q 012898 347 H-AVSLLPPIILFHGTADYSIPADASKNFANTLQRVGVRAESILYEGKTHTDL 398 (454)
Q Consensus 347 ~-~~~~~pPvLiihGe~D~~Vp~~~s~~l~~~l~~~g~~vel~~~~g~~H~~~ 398 (454)
. .....||+++++|+.|.+ .++++.|+++|++.|+++++++++|+.|.+.
T Consensus 160 ~~~~~~~Pp~~i~~g~~D~l--~~~~~~~~~~L~~~gv~v~~~~~~g~~H~f~ 210 (211)
T PF07859_consen 160 ASDLKGLPPTLIIHGEDDVL--VDDSLRFAEKLKKAGVDVELHVYPGMPHGFF 210 (211)
T ss_dssp SSCCTTCHEEEEEEETTSTT--HHHHHHHHHHHHHTT-EEEEEEETTEETTGG
T ss_pred ccccccCCCeeeeccccccc--hHHHHHHHHHHHHCCCCEEEEEECCCeEEee
Confidence 1 355678999999999976 6899999999999999999999999999843
No 5
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=99.87 E-value=2.5e-21 Score=209.43 Aligned_cols=233 Identities=17% Similarity=0.159 Sum_probs=158.5
Q ss_pred eceeccCCCCe--eEEEEeeCCC--CCCCcEEEEEcCCCccCCcccchhHHHHHHHhCCcEEEEEecCCCCCCC------
Q 012898 179 RGIVYGDQPRN--RLDLYFPKSS--DGPKPVVAFITGGAWIIGYKAWGSLLGQQLSERDIIVACIDYRNFPQGT------ 248 (454)
Q Consensus 179 ~~v~y~~~~~~--~l~vy~P~~~--~~~~Pvvv~~HGgg~~~g~~~~~~~~~~~la~~G~~Vv~~dyr~~~~~~------ 248 (454)
+.+.|...++. ...++.|.+. .++.|+|||+|||.+..-. ..+....+.|+.+||+|+.+|||+.....
T Consensus 366 e~~~~~~~dG~~i~~~l~~P~~~~~~k~yP~i~~~hGGP~~~~~-~~~~~~~q~~~~~G~~V~~~n~RGS~GyG~~F~~~ 444 (620)
T COG1506 366 EPVTYKSNDGETIHGWLYKPPGFDPRKKYPLIVYIHGGPSAQVG-YSFNPEIQVLASAGYAVLAPNYRGSTGYGREFADA 444 (620)
T ss_pred eEEEEEcCCCCEEEEEEecCCCCCCCCCCCEEEEeCCCCccccc-cccchhhHHHhcCCeEEEEeCCCCCCccHHHHHHh
Confidence 45666665564 4456777653 3346999999999743322 34566789999999999999999754321
Q ss_pred -----hhHHHHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCchHHHHHHHHHHHHHhhhCCC--CCcccchhhhhhhcccc
Q 012898 249 -----IKDMVKDASQGISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLLEQAIKETGEG--ESTTWSVSQIRAYFGLS 321 (454)
Q Consensus 249 -----~~~~~~D~~~al~~l~~~~~~~g~d~~rI~l~G~S~GG~la~~~a~~~~~~~~~~~--~~~~~~~~~i~~~~~~~ 321 (454)
....++|+.++++|+.+.. .+|++||+|+|+|.||.++++++.+.+.-..+.. ....|.......-....
T Consensus 445 ~~~~~g~~~~~D~~~~~~~l~~~~---~~d~~ri~i~G~SyGGymtl~~~~~~~~f~a~~~~~~~~~~~~~~~~~~~~~~ 521 (620)
T COG1506 445 IRGDWGGVDLEDLIAAVDALVKLP---LVDPERIGITGGSYGGYMTLLAATKTPRFKAAVAVAGGVDWLLYFGESTEGLR 521 (620)
T ss_pred hhhccCCccHHHHHHHHHHHHhCC---CcChHHeEEeccChHHHHHHHHHhcCchhheEEeccCcchhhhhccccchhhc
Confidence 1235889999999887654 3799999999999999999999987552211111 11111110000000000
Q ss_pred CCCCCChhhhhcC---CcccccCCCccccccCCCCCEEEEEeCCCCCCChHHHHHHHHHHHHcCCCEEEEEeCCCCcccc
Q 012898 322 GGIMDGEESLRQY---SPEVLVQDPNTRHAVSLLPPIILFHGTADYSIPADASKNFANTLQRVGVRAESILYEGKTHTDL 398 (454)
Q Consensus 322 g~~~~~~~~~~~~---~p~~~~~~~~~~~~~~~~pPvLiihGe~D~~Vp~~~s~~l~~~l~~~g~~vel~~~~g~~H~~~ 398 (454)
......... ....+....++..+.+..+|+||+||++|..||.+|+++|+++|+..|+++++++||+.+|.+.
T Consensus 522 ----~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~LliHG~~D~~v~~~q~~~~~~aL~~~g~~~~~~~~p~e~H~~~ 597 (620)
T COG1506 522 ----FDPEENGGGPPEDREKYEDRSPIFYADNIKTPLLLIHGEEDDRVPIEQAEQLVDALKRKGKPVELVVFPDEGHGFS 597 (620)
T ss_pred ----CCHHHhCCCcccChHHHHhcChhhhhcccCCCEEEEeecCCccCChHHHHHHHHHHHHcCceEEEEEeCCCCcCCC
Confidence 000000000 1222333344455666778999999999999999999999999999999999999999999833
Q ss_pred ccCCCCCCcHHHHHHHHHHHHHhcCh
Q 012898 399 FLQDPMRGGKDDMFEDIVAIIHADDQ 424 (454)
Q Consensus 399 ~l~~p~~~~~~~~~~~i~~Fl~~~~~ 424 (454)
. .++..+.++.+++|++++..
T Consensus 598 ~-----~~~~~~~~~~~~~~~~~~~~ 618 (620)
T COG1506 598 R-----PENRVKVLKEILDWFKRHLK 618 (620)
T ss_pred C-----chhHHHHHHHHHHHHHHHhc
Confidence 2 34567899999999998763
No 6
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=99.85 E-value=3e-21 Score=195.22 Aligned_cols=155 Identities=25% Similarity=0.352 Sum_probs=120.3
Q ss_pred hhhhhhcCChhH----HHHHHH--------HhHhhhhcCCCccccccccccccceeeceeccCCCCeeEEEEeeCCCCCC
Q 012898 135 KLLRYLGVGYRW----IVRFLA--------LGCYSLLLLPGFIQVGCHYFFSSQVRRGIVYGDQPRNRLDLYFPKSSDGP 202 (454)
Q Consensus 135 ~~~~~lg~~~~w----~~~~~~--------~~~~~~~~~p~~~~~~~~~~~~~~~~~~v~y~~~~~~~l~vy~P~~~~~~ 202 (454)
++-+++||+|+- -.||.. -......+.|.|.|..+ .... .+....+++|++||||.|+....+
T Consensus 19 ~v~~w~GIpYA~pPvG~~Rfr~p~~~~~w~~~rda~~~gp~~~Q~~~----~~~~-~~~~~~sEDCL~LNIwaP~~~a~~ 93 (491)
T COG2272 19 GVHSWLGIPYAAPPVGELRFRRPVPPEPWSGVRDATQFGPACPQPFN----RMGS-GEDFTGSEDCLYLNIWAPEVPAEK 93 (491)
T ss_pred ceeEEeecccCCCCCCcccccCCCCCcCCCcccchhccCCCCCCccc----cccc-cccCCccccceeEEeeccCCCCCC
Confidence 377888888872 112211 11123566777777643 1111 123346889999999999965677
Q ss_pred CcEEEEEcCCCccCCcccchhHHHHHHHhCC-cEEEEEecCCCCCCCh-------------hHHHHHHHHHHHHHHHhhh
Q 012898 203 KPVVAFITGGAWIIGYKAWGSLLGQQLSERD-IIVACIDYRNFPQGTI-------------KDMVKDASQGISFVCNNIS 268 (454)
Q Consensus 203 ~Pvvv~~HGgg~~~g~~~~~~~~~~~la~~G-~~Vv~~dyr~~~~~~~-------------~~~~~D~~~al~~l~~~~~ 268 (454)
.||+||||||+|..|+.....+....|+++| ++||++|||++..+.+ +.++.|+..|++|+++||+
T Consensus 94 ~PVmV~IHGG~y~~Gs~s~~~ydgs~La~~g~vVvVSvNYRLG~lGfL~~~~~~~~~~~~~n~Gl~DqilALkWV~~NIe 173 (491)
T COG2272 94 LPVMVYIHGGGYIMGSGSEPLYDGSALAARGDVVVVSVNYRLGALGFLDLSSLDTEDAFASNLGLLDQILALKWVRDNIE 173 (491)
T ss_pred CcEEEEEeccccccCCCcccccChHHHHhcCCEEEEEeCcccccceeeehhhccccccccccccHHHHHHHHHHHHHHHH
Confidence 9999999999999999988778899999997 9999999999765542 2368999999999999999
Q ss_pred hcCCCCCcEEEEEcCchHHHHHHHHH
Q 012898 269 EYGGDPDRIYLMGQSAGAHIAACTLL 294 (454)
Q Consensus 269 ~~g~d~~rI~l~G~S~GG~la~~~a~ 294 (454)
.||+||++|.|+|+|+||+.++.++.
T Consensus 174 ~FGGDp~NVTl~GeSAGa~si~~Lla 199 (491)
T COG2272 174 AFGGDPQNVTLFGESAGAASILTLLA 199 (491)
T ss_pred HhCCCccceEEeeccchHHHHHHhhc
Confidence 99999999999999999999987654
No 7
>PRK10566 esterase; Provisional
Probab=99.81 E-value=1.3e-18 Score=166.94 Aligned_cols=212 Identities=18% Similarity=0.181 Sum_probs=132.6
Q ss_pred EEEEeeCCC-CCCCcEEEEEcCCCccCCcccchhHHHHHHHhCCcEEEEEecCCCCCCC-------h-------hHHHHH
Q 012898 191 LDLYFPKSS-DGPKPVVAFITGGAWIIGYKAWGSLLGQQLSERDIIVACIDYRNFPQGT-------I-------KDMVKD 255 (454)
Q Consensus 191 l~vy~P~~~-~~~~Pvvv~~HGgg~~~g~~~~~~~~~~~la~~G~~Vv~~dyr~~~~~~-------~-------~~~~~D 255 (454)
...|.|... +++.|+||++||.+ ++...+..+++.|+++||.|+++|||+++... . ...++|
T Consensus 14 ~~~~~p~~~~~~~~p~vv~~HG~~---~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~~~~~~~~~~~~~~~~~~~~~~~~ 90 (249)
T PRK10566 14 VLHAFPAGQRDTPLPTVFFYHGFT---SSKLVYSYFAVALAQAGFRVIMPDAPMHGARFSGDEARRLNHFWQILLQNMQE 90 (249)
T ss_pred eEEEcCCCCCCCCCCEEEEeCCCC---cccchHHHHHHHHHhCCCEEEEecCCcccccCCCccccchhhHHHHHHHHHHH
Confidence 345666542 35679999999954 44556677899999999999999999876431 1 123456
Q ss_pred HHHHHHHHHHhhhhcCCCCCcEEEEEcCchHHHHHHHHHHHHHhhhCC-CCCcccchhhhhhhccccCCCCC---Chhhh
Q 012898 256 ASQGISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLLEQAIKETGE-GESTTWSVSQIRAYFGLSGGIMD---GEESL 331 (454)
Q Consensus 256 ~~~al~~l~~~~~~~g~d~~rI~l~G~S~GG~la~~~a~~~~~~~~~~-~~~~~~~~~~i~~~~~~~g~~~~---~~~~~ 331 (454)
+.++++|+.+. ..+|++||+++|||+||.+++.++.+.+...... .....+. ..+.... ....... .....
T Consensus 91 ~~~~~~~l~~~---~~~~~~~i~v~G~S~Gg~~al~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~ 165 (249)
T PRK10566 91 FPTLRAAIREE---GWLLDDRLAVGGASMGGMTALGIMARHPWVKCVASLMGSGYF-TSLARTL-FPPLIPETAAQQAEF 165 (249)
T ss_pred HHHHHHHHHhc---CCcCccceeEEeecccHHHHHHHHHhCCCeeEEEEeeCcHHH-HHHHHHh-cccccccccccHHHH
Confidence 66666776553 2368899999999999999998887654221111 0000000 0000000 0000000 00000
Q ss_pred hc-CCcccccCCCccccccCC-CCCEEEEEeCCCCCCChHHHHHHHHHHHHcCC--CEEEEEeCCCCccccccCCCCCCc
Q 012898 332 RQ-YSPEVLVQDPNTRHAVSL-LPPIILFHGTADYSIPADASKNFANTLQRVGV--RAESILYEGKTHTDLFLQDPMRGG 407 (454)
Q Consensus 332 ~~-~~p~~~~~~~~~~~~~~~-~pPvLiihGe~D~~Vp~~~s~~l~~~l~~~g~--~vel~~~~g~~H~~~~l~~p~~~~ 407 (454)
.. +.+. ..........+. ..|+|++||++|.+||.+++++++++++..|. ++++..|++.+|. +.
T Consensus 166 ~~~~~~~--~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~H~-~~-------- 234 (249)
T PRK10566 166 NNIVAPL--AEWEVTHQLEQLADRPLLLWHGLADDVVPAAESLRLQQALRERGLDKNLTCLWEPGVRHR-IT-------- 234 (249)
T ss_pred HHHHHHH--hhcChhhhhhhcCCCCEEEEEcCCCCcCCHHHHHHHHHHHHhcCCCcceEEEecCCCCCc-cC--------
Confidence 00 0000 000000111222 36999999999999999999999999998886 4889999999997 21
Q ss_pred HHHHHHHHHHHHHhc
Q 012898 408 KDDMFEDIVAIIHAD 422 (454)
Q Consensus 408 ~~~~~~~i~~Fl~~~ 422 (454)
.+.++++++||+++
T Consensus 235 -~~~~~~~~~fl~~~ 248 (249)
T PRK10566 235 -PEALDAGVAFFRQH 248 (249)
T ss_pred -HHHHHHHHHHHHhh
Confidence 36789999999875
No 8
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=99.80 E-value=6.4e-19 Score=165.53 Aligned_cols=183 Identities=24% Similarity=0.322 Sum_probs=124.3
Q ss_pred HHHHHHHhCCcEEEEEecCCCCCCC-----------hhHHHHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCchHHHHHHH
Q 012898 224 LLGQQLSERDIIVACIDYRNFPQGT-----------IKDMVKDASQGISFVCNNISEYGGDPDRIYLMGQSAGAHIAACT 292 (454)
Q Consensus 224 ~~~~~la~~G~~Vv~~dyr~~~~~~-----------~~~~~~D~~~al~~l~~~~~~~g~d~~rI~l~G~S~GG~la~~~ 292 (454)
...+.|+++||+|+.+|||+.+..+ ....++|+.++++|+.++. .+|++||+|+|+|+||++++.+
T Consensus 5 ~~~~~la~~Gy~v~~~~~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~---~iD~~ri~i~G~S~GG~~a~~~ 81 (213)
T PF00326_consen 5 WNAQLLASQGYAVLVPNYRGSGGYGKDFHEAGRGDWGQADVDDVVAAIEYLIKQY---YIDPDRIGIMGHSYGGYLALLA 81 (213)
T ss_dssp HHHHHHHTTT-EEEEEE-TTSSSSHHHHHHTTTTGTTHHHHHHHHHHHHHHHHTT---SEEEEEEEEEEETHHHHHHHHH
T ss_pred HHHHHHHhCCEEEEEEcCCCCCccchhHHHhhhccccccchhhHHHHHHHHhccc---cccceeEEEEcccccccccchh
Confidence 4568899999999999999976422 1245888999999997754 5899999999999999999999
Q ss_pred HHHHHHhhhCCCCCcccchhhhhhh-----------ccccCCCCCChhhhhcCCcccccCCCccccccC--CCCCEEEEE
Q 012898 293 LLEQAIKETGEGESTTWSVSQIRAY-----------FGLSGGIMDGEESLRQYSPEVLVQDPNTRHAVS--LLPPIILFH 359 (454)
Q Consensus 293 a~~~~~~~~~~~~~~~~~~~~i~~~-----------~~~~g~~~~~~~~~~~~~p~~~~~~~~~~~~~~--~~pPvLiih 359 (454)
+.+++........... ...+... ....+........+...++. ....+ ..+|+||+|
T Consensus 82 ~~~~~~~f~a~v~~~g--~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~--------~~~~~~~~~~P~li~h 151 (213)
T PF00326_consen 82 ATQHPDRFKAAVAGAG--VSDLFSYYGTTDIYTKAEYLEYGDPWDNPEFYRELSPI--------SPADNVQIKPPVLIIH 151 (213)
T ss_dssp HHHTCCGSSEEEEESE---SSTTCSBHHTCCHHHGHHHHHSSTTTSHHHHHHHHHG--------GGGGGCGGGSEEEEEE
T ss_pred hcccceeeeeeeccce--ecchhcccccccccccccccccCccchhhhhhhhhccc--------cccccccCCCCEEEEc
Confidence 9865544322110000 0000000 01111111112222222222 22222 567999999
Q ss_pred eCCCCCCChHHHHHHHHHHHHcCCCEEEEEeCCCCccccccCCCCCCcHHHHHHHHHHHHHhcCh
Q 012898 360 GTADYSIPADASKNFANTLQRVGVRAESILYEGKTHTDLFLQDPMRGGKDDMFEDIVAIIHADDQ 424 (454)
Q Consensus 360 Ge~D~~Vp~~~s~~l~~~l~~~g~~vel~~~~g~~H~~~~l~~p~~~~~~~~~~~i~~Fl~~~~~ 424 (454)
|++|..||++++.+++++|++.|.+++++++|+++|.+. ..+...+..+++.+|++++..
T Consensus 152 G~~D~~Vp~~~s~~~~~~L~~~g~~~~~~~~p~~gH~~~-----~~~~~~~~~~~~~~f~~~~l~ 211 (213)
T PF00326_consen 152 GENDPRVPPSQSLRLYNALRKAGKPVELLIFPGEGHGFG-----NPENRRDWYERILDFFDKYLK 211 (213)
T ss_dssp ETTBSSSTTHHHHHHHHHHHHTTSSEEEEEETT-SSSTT-----SHHHHHHHHHHHHHHHHHHTT
T ss_pred cCCCCccCHHHHHHHHHHHHhcCCCEEEEEcCcCCCCCC-----CchhHHHHHHHHHHHHHHHcC
Confidence 999999999999999999999999999999999999622 123456899999999998763
No 9
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=99.77 E-value=1.8e-17 Score=166.06 Aligned_cols=226 Identities=16% Similarity=0.224 Sum_probs=138.0
Q ss_pred eeEEEEeeCCCCCCCcEEEEEcCCCccCCccc-chhHHHHHHHhCCcEEEEEecCCCCCCC--------hhHHHHHHHHH
Q 012898 189 NRLDLYFPKSSDGPKPVVAFITGGAWIIGYKA-WGSLLGQQLSERDIIVACIDYRNFPQGT--------IKDMVKDASQG 259 (454)
Q Consensus 189 ~~l~vy~P~~~~~~~Pvvv~~HGgg~~~g~~~-~~~~~~~~la~~G~~Vv~~dyr~~~~~~--------~~~~~~D~~~a 259 (454)
+....|.|......+++|||+||.+ ++.. .+..++..|+++||.|+++|+||+|.+. .....+|+.++
T Consensus 45 l~~~~~~~~~~~~~~~~VvllHG~~---~~~~~~~~~~~~~L~~~Gy~V~~~D~rGhG~S~~~~~~~~~~~~~~~D~~~~ 121 (330)
T PLN02298 45 LFTRSWLPSSSSPPRALIFMVHGYG---NDISWTFQSTAIFLAQMGFACFALDLEGHGRSEGLRAYVPNVDLVVEDCLSF 121 (330)
T ss_pred EEEEEEecCCCCCCceEEEEEcCCC---CCcceehhHHHHHHHhCCCEEEEecCCCCCCCCCccccCCCHHHHHHHHHHH
Confidence 4556677764334678999999964 2222 3455678899999999999999998764 23356778888
Q ss_pred HHHHHHhhhhcCCCCCcEEEEEcCchHHHHHHHHHHHHHhhhCCCCCcc-----------cchhhh----hhhcccc---
Q 012898 260 ISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLLEQAIKETGEGESTT-----------WSVSQI----RAYFGLS--- 321 (454)
Q Consensus 260 l~~l~~~~~~~g~d~~rI~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~-----------~~~~~i----~~~~~~~--- 321 (454)
++++..... .+..+++|+||||||.+++.++.+++....+...... +....+ ..+....
T Consensus 122 i~~l~~~~~---~~~~~i~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (330)
T PLN02298 122 FNSVKQREE---FQGLPRFLYGESMGGAICLLIHLANPEGFDGAVLVAPMCKISDKIRPPWPIPQILTFVARFLPTLAIV 198 (330)
T ss_pred HHHHHhccc---CCCCCEEEEEecchhHHHHHHHhcCcccceeEEEecccccCCcccCCchHHHHHHHHHHHHCCCCccc
Confidence 887765321 2334799999999999999888776543222111000 000000 0000000
Q ss_pred CC--CCC----C--hhhhhcCCcccccCCC--------------ccccccCCCCCEEEEEeCCCCCCChHHHHHHHHHHH
Q 012898 322 GG--IMD----G--EESLRQYSPEVLVQDP--------------NTRHAVSLLPPIILFHGTADYSIPADASKNFANTLQ 379 (454)
Q Consensus 322 g~--~~~----~--~~~~~~~~p~~~~~~~--------------~~~~~~~~~pPvLiihGe~D~~Vp~~~s~~l~~~l~ 379 (454)
.. ... . ...+....+..+.... ..........|+||+||++|.++|.+.++++++.++
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~ivp~~~~~~l~~~i~ 278 (330)
T PLN02298 199 PTADLLEKSVKVPAKKIIAKRNPMRYNGKPRLGTVVELLRVTDYLGKKLKDVSIPFIVLHGSADVVTDPDVSRALYEEAK 278 (330)
T ss_pred cCCCcccccccCHHHHHHHHhCccccCCCccHHHHHHHHHHHHHHHHhhhhcCCCEEEEecCCCCCCCHHHHHHHHHHhc
Confidence 00 000 0 0000011111111000 001123455799999999999999999999999875
Q ss_pred HcCCCEEEEEeCCCCccccccCCCCCCcHHHHHHHHHHHHHhcCh
Q 012898 380 RVGVRAESILYEGKTHTDLFLQDPMRGGKDDMFEDIVAIIHADDQ 424 (454)
Q Consensus 380 ~~g~~vel~~~~g~~H~~~~l~~p~~~~~~~~~~~i~~Fl~~~~~ 424 (454)
. .+++++++++++|. .+...| ....+++.+.+.+||+++..
T Consensus 279 ~--~~~~l~~~~~a~H~-~~~e~p-d~~~~~~~~~i~~fl~~~~~ 319 (330)
T PLN02298 279 S--EDKTIKIYDGMMHS-LLFGEP-DENIEIVRRDILSWLNERCT 319 (330)
T ss_pred c--CCceEEEcCCcEee-eecCCC-HHHHHHHHHHHHHHHHHhcc
Confidence 3 25789999999997 544444 12346788999999999863
No 10
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=99.77 E-value=1.7e-19 Score=191.89 Aligned_cols=159 Identities=28% Similarity=0.369 Sum_probs=102.7
Q ss_pred hhhhhhcCChhHH----HHHHHH--------hHhhhhcCCCccccccccccccceeeceeccCCCCeeEEEEeeCCCCC-
Q 012898 135 KLLRYLGVGYRWI----VRFLAL--------GCYSLLLLPGFIQVGCHYFFSSQVRRGIVYGDQPRNRLDLYFPKSSDG- 201 (454)
Q Consensus 135 ~~~~~lg~~~~w~----~~~~~~--------~~~~~~~~p~~~~~~~~~~~~~~~~~~v~y~~~~~~~l~vy~P~~~~~- 201 (454)
.+.+|+||||+-. .||-.. ...+....+.|.|...... ..........+++|++|+||.|.....
T Consensus 45 ~v~~f~gIpYA~pP~g~~Rf~~p~~~~~~~~~~~a~~~~~~C~Q~~~~~~--~~~~~~~~~~sEDCL~LnI~~P~~~~~~ 122 (535)
T PF00135_consen 45 GVYSFLGIPYAQPPVGELRFRPPQPPPPWSGVRDATKYGPACPQPPPPGP--SPGFNPPVGQSEDCLYLNIYTPSNASSN 122 (535)
T ss_dssp EEEEEEEEESSE---GGGTTS--EB--S-SSEEETBS---BESCECTTSS--HHHCSHSSHBES---EEEEEEETSSSST
T ss_pred ceEEEeCcccCCCCCCCcccccccccccchhhhhhhhccccccccccccc--ccccccccCCCchHHHHhhhhccccccc
Confidence 4888999999721 122110 1122445566666543221 000111112377889999999987443
Q ss_pred -CCcEEEEEcCCCccCCcccchhHHH-HHHHhCCcEEEEEecCCCCCC---------C-hhHHHHHHHHHHHHHHHhhhh
Q 012898 202 -PKPVVAFITGGAWIIGYKAWGSLLG-QQLSERDIIVACIDYRNFPQG---------T-IKDMVKDASQGISFVCNNISE 269 (454)
Q Consensus 202 -~~Pvvv~~HGgg~~~g~~~~~~~~~-~~la~~G~~Vv~~dyr~~~~~---------~-~~~~~~D~~~al~~l~~~~~~ 269 (454)
++||+||||||||..|+........ ..+++.+++||+++||++..+ . .+.++.|+..|++||+++|+.
T Consensus 123 ~~lPV~v~ihGG~f~~G~~~~~~~~~~~~~~~~~vivVt~nYRlg~~Gfl~~~~~~~~~gN~Gl~Dq~~AL~WV~~nI~~ 202 (535)
T PF00135_consen 123 SKLPVMVWIHGGGFMFGSGSFPPYDGASLAASKDVIVVTINYRLGAFGFLSLGDLDAPSGNYGLLDQRLALKWVQDNIAA 202 (535)
T ss_dssp TSEEEEEEE--STTTSSCTTSGGGHTHHHHHHHTSEEEEE----HHHHH-BSSSTTSHBSTHHHHHHHHHHHHHHHHGGG
T ss_pred cccceEEEeecccccCCCcccccccccccccCCCEEEEEecccccccccccccccccCchhhhhhhhHHHHHHHHhhhhh
Confidence 5899999999999999874233333 445566999999999974221 2 467899999999999999999
Q ss_pred cCCCCCcEEEEEcCchHHHHHHHHHH
Q 012898 270 YGGDPDRIYLMGQSAGAHIAACTLLE 295 (454)
Q Consensus 270 ~g~d~~rI~l~G~S~GG~la~~~a~~ 295 (454)
||+||+||.|+|+|+||..+..++..
T Consensus 203 FGGDp~~VTl~G~SAGa~sv~~~l~s 228 (535)
T PF00135_consen 203 FGGDPDNVTLFGQSAGAASVSLLLLS 228 (535)
T ss_dssp GTEEEEEEEEEEETHHHHHHHHHHHG
T ss_pred cccCCcceeeeeecccccccceeeec
Confidence 99999999999999999999988876
No 11
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=99.76 E-value=6.7e-18 Score=161.25 Aligned_cols=226 Identities=18% Similarity=0.207 Sum_probs=147.6
Q ss_pred CeeEEEEeeCCCCCCCcEEEEEcCCCccCCcccchhHHHHHHHhCCcEEEEEecCCCCCCC--------hhHHHHHHHHH
Q 012898 188 RNRLDLYFPKSSDGPKPVVAFITGGAWIIGYKAWGSLLGQQLSERDIIVACIDYRNFPQGT--------IKDMVKDASQG 259 (454)
Q Consensus 188 ~~~l~vy~P~~~~~~~Pvvv~~HGgg~~~g~~~~~~~~~~~la~~G~~Vv~~dyr~~~~~~--------~~~~~~D~~~a 259 (454)
.+....|.|....+++..|+++||.|. -....+..++..|+..||.|+++||+|+|.+. +...++|+..-
T Consensus 39 ~lft~~W~p~~~~~pr~lv~~~HG~g~--~~s~~~~~~a~~l~~~g~~v~a~D~~GhG~SdGl~~yi~~~d~~v~D~~~~ 116 (313)
T KOG1455|consen 39 KLFTQSWLPLSGTEPRGLVFLCHGYGE--HSSWRYQSTAKRLAKSGFAVYAIDYEGHGRSDGLHAYVPSFDLVVDDVISF 116 (313)
T ss_pred EeEEEecccCCCCCCceEEEEEcCCcc--cchhhHHHHHHHHHhCCCeEEEeeccCCCcCCCCcccCCcHHHHHHHHHHH
Confidence 456778999775577889999999652 22235667899999999999999999988764 33457777777
Q ss_pred HHHHHHhhhhcCCCCCcEEEEEcCchHHHHHHHHHHHHHhhhCCCCCc--c---------cchhhhhh----hc---ccc
Q 012898 260 ISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLLEQAIKETGEGEST--T---------WSVSQIRA----YF---GLS 321 (454)
Q Consensus 260 l~~l~~~~~~~g~d~~rI~l~G~S~GG~la~~~a~~~~~~~~~~~~~~--~---------~~~~~i~~----~~---~~~ 321 (454)
++.++...+.-| -..+++||||||++++.++.+++....+..... . +....+.. .+ .+.
T Consensus 117 ~~~i~~~~e~~~---lp~FL~GeSMGGAV~Ll~~~k~p~~w~G~ilvaPmc~i~~~~kp~p~v~~~l~~l~~liP~wk~v 193 (313)
T KOG1455|consen 117 FDSIKEREENKG---LPRFLFGESMGGAVALLIALKDPNFWDGAILVAPMCKISEDTKPHPPVISILTLLSKLIPTWKIV 193 (313)
T ss_pred HHHHhhccccCC---CCeeeeecCcchHHHHHHHhhCCcccccceeeecccccCCccCCCcHHHHHHHHHHHhCCceeec
Confidence 777666544222 268999999999999999987655444321110 0 00000000 00 000
Q ss_pred CC------CCCChh--hhhcCCcccccCCCcc--------------ccccCCCCCEEEEEeCCCCCCChHHHHHHHHHHH
Q 012898 322 GG------IMDGEE--SLRQYSPEVLVQDPNT--------------RHAVSLLPPIILFHGTADYSIPADASKNFANTLQ 379 (454)
Q Consensus 322 g~------~~~~~~--~~~~~~p~~~~~~~~~--------------~~~~~~~pPvLiihGe~D~~Vp~~~s~~l~~~l~ 379 (454)
.. .....+ .....+|..+...+.+ ........|++|+||++|.++....+++|++.+.
T Consensus 194 p~~d~~~~~~kdp~~r~~~~~npl~y~g~pRl~T~~ElLr~~~~le~~l~~vtvPflilHG~dD~VTDp~~Sk~Lye~A~ 273 (313)
T KOG1455|consen 194 PTKDIIDVAFKDPEKRKILRSDPLCYTGKPRLKTAYELLRVTADLEKNLNEVTVPFLILHGTDDKVTDPKVSKELYEKAS 273 (313)
T ss_pred CCccccccccCCHHHHHHhhcCCceecCCccHHHHHHHHHHHHHHHHhcccccccEEEEecCCCcccCcHHHHHHHHhcc
Confidence 00 000111 1111122222222111 1222344599999999999999999999999877
Q ss_pred HcCCCEEEEEeCCCCccccccCCCCCCcHHHHHHHHHHHHHhc
Q 012898 380 RVGVRAESILYEGKTHTDLFLQDPMRGGKDDMFEDIVAIIHAD 422 (454)
Q Consensus 380 ~~g~~vel~~~~g~~H~~~~l~~p~~~~~~~~~~~i~~Fl~~~ 422 (454)
. .+.++.+|||+.|. +...+ ..++.+.++.+|++||+++
T Consensus 274 S--~DKTlKlYpGm~H~-Ll~gE-~~en~e~Vf~DI~~Wl~~r 312 (313)
T KOG1455|consen 274 S--SDKTLKLYPGMWHS-LLSGE-PDENVEIVFGDIISWLDER 312 (313)
T ss_pred C--CCCceeccccHHHH-hhcCC-CchhHHHHHHHHHHHHHhc
Confidence 4 47899999999998 43222 4568899999999999976
No 12
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=99.76 E-value=1.1e-17 Score=157.90 Aligned_cols=196 Identities=19% Similarity=0.302 Sum_probs=132.3
Q ss_pred EEEEeeCCCCCCCcEEEEEcCCCccCCcccchhHHHHHHHhCCcEEEEEecCCCCC---CCh---------------hHH
Q 012898 191 LDLYFPKSSDGPKPVVAFITGGAWIIGYKAWGSLLGQQLSERDIIVACIDYRNFPQ---GTI---------------KDM 252 (454)
Q Consensus 191 l~vy~P~~~~~~~Pvvv~~HGgg~~~g~~~~~~~~~~~la~~G~~Vv~~dyr~~~~---~~~---------------~~~ 252 (454)
..++.|++. ++.|.||++|+ ..|-......+++.|+++||.|+++|+-.... ... ...
T Consensus 3 ay~~~P~~~-~~~~~Vvv~~d---~~G~~~~~~~~ad~lA~~Gy~v~~pD~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (218)
T PF01738_consen 3 AYVARPEGG-GPRPAVVVIHD---IFGLNPNIRDLADRLAEEGYVVLAPDLFGGRGAPPSDPEEAFAAMRELFAPRPEQV 78 (218)
T ss_dssp EEEEEETTS-SSEEEEEEE-B---TTBS-HHHHHHHHHHHHTT-EEEEE-CCCCTS--CCCHHCHHHHHHHCHHHSHHHH
T ss_pred EEEEeCCCC-CCCCEEEEEcC---CCCCchHHHHHHHHHHhcCCCEEecccccCCCCCccchhhHHHHHHHHHhhhHHHH
Confidence 567888876 68899999999 34555677789999999999999999754333 111 112
Q ss_pred HHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCchHHHHHHHHHHHHHhhhCCCCCcccchhhhhhhccccCCCCCChhhhh
Q 012898 253 VKDASQGISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLLEQAIKETGEGESTTWSVSQIRAYFGLSGGIMDGEESLR 332 (454)
Q Consensus 253 ~~D~~~al~~l~~~~~~~g~d~~rI~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~~ 332 (454)
..|+.++++|++++.. .+.+||+++|+|+||.+++.++.+. ..+.+.+..+|. .....
T Consensus 79 ~~~~~aa~~~l~~~~~---~~~~kig~vGfc~GG~~a~~~a~~~---------------~~~~a~v~~yg~-~~~~~--- 136 (218)
T PF01738_consen 79 AADLQAAVDYLRAQPE---VDPGKIGVVGFCWGGKLALLLAARD---------------PRVDAAVSFYGG-SPPPP--- 136 (218)
T ss_dssp HHHHHHHHHHHHCTTT---CEEEEEEEEEETHHHHHHHHHHCCT---------------TTSSEEEEES-S-SSGGG---
T ss_pred HHHHHHHHHHHHhccc---cCCCcEEEEEEecchHHhhhhhhhc---------------cccceEEEEcCC-CCCCc---
Confidence 4566778888877642 5678999999999999999887542 234444444440 00000
Q ss_pred cCCcccccCCCccccccCCCCCEEEEEeCCCCCCChHHHHHHHHHHHHcCCCEEEEEeCCCCccccccCCC--CCCcHHH
Q 012898 333 QYSPEVLVQDPNTRHAVSLLPPIILFHGTADYSIPADASKNFANTLQRVGVRAESILYEGKTHTDLFLQDP--MRGGKDD 410 (454)
Q Consensus 333 ~~~p~~~~~~~~~~~~~~~~pPvLiihGe~D~~Vp~~~s~~l~~~l~~~g~~vel~~~~g~~H~~~~l~~p--~~~~~~~ 410 (454)
..........|+++++|++|..++.+..+.+.+.+++.|.++++++|+|++|+|..-..+ .....++
T Consensus 137 -----------~~~~~~~~~~P~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~y~ga~HgF~~~~~~~~~~~aa~~ 205 (218)
T PF01738_consen 137 -----------PLEDAPKIKAPVLILFGENDPFFPPEEVEALEEALKAAGVDVEVHVYPGAGHGFANPSRPPYDPAAAED 205 (218)
T ss_dssp -----------HHHHGGG--S-EEEEEETT-TTS-HHHHHHHHHHHHCTTTTEEEEEETT--TTTTSTTSTT--HHHHHH
T ss_pred -----------chhhhcccCCCEeecCccCCCCCChHHHHHHHHHHHhcCCcEEEEECCCCcccccCCCCcccCHHHHHH
Confidence 011222344699999999999999999999999999999999999999999996654433 2345688
Q ss_pred HHHHHHHHHHhcC
Q 012898 411 MFEDIVAIIHADD 423 (454)
Q Consensus 411 ~~~~i~~Fl~~~~ 423 (454)
.++++++|+++++
T Consensus 206 a~~~~~~ff~~~L 218 (218)
T PF01738_consen 206 AWQRTLAFFKRHL 218 (218)
T ss_dssp HHHHHHHHHCC--
T ss_pred HHHHHHHHHHhcC
Confidence 9999999998763
No 13
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=99.75 E-value=2.3e-18 Score=182.01 Aligned_cols=156 Identities=28% Similarity=0.410 Sum_probs=114.2
Q ss_pred hhhhhhcCChhHH----HHHHH--------HhHhhhhcCCCccccccccccccceeeceeccCCCCeeEEEEeeCCC--C
Q 012898 135 KLLRYLGVGYRWI----VRFLA--------LGCYSLLLLPGFIQVGCHYFFSSQVRRGIVYGDQPRNRLDLYFPKSS--D 200 (454)
Q Consensus 135 ~~~~~lg~~~~w~----~~~~~--------~~~~~~~~~p~~~~~~~~~~~~~~~~~~v~y~~~~~~~l~vy~P~~~--~ 200 (454)
.+..|+||||+-. .||-. -..-+....+.|.|........ .......+++|++++||.|... .
T Consensus 16 ~~~~F~GIPYA~pP~g~~Rf~~p~~~~~w~~~~~a~~~g~~c~Q~~~~~~~~---~~~~~~~sEdcl~l~i~~p~~~~~~ 92 (493)
T cd00312 16 GVYSFLGIPYAEPPVGDLRFKEPQPYEPWSDVLDATSYPPSCMQWDQLGGGL---WNAKLPGSEDCLYLNVYTPKNTKPG 92 (493)
T ss_pred CEEEEeccccCCCCCccccCCCCCCCCCCcCceeccccCCCCccCCcccccc---ccCCCCCCCcCCeEEEEeCCCCCCC
Confidence 4778889988721 12211 0112355677787753221100 0112235789999999999853 5
Q ss_pred CCCcEEEEEcCCCccCCcccchhHHHHHHHhC-C-cEEEEEecCCCCCCCh---------hHHHHHHHHHHHHHHHhhhh
Q 012898 201 GPKPVVAFITGGAWIIGYKAWGSLLGQQLSER-D-IIVACIDYRNFPQGTI---------KDMVKDASQGISFVCNNISE 269 (454)
Q Consensus 201 ~~~Pvvv~~HGgg~~~g~~~~~~~~~~~la~~-G-~~Vv~~dyr~~~~~~~---------~~~~~D~~~al~~l~~~~~~ 269 (454)
++.|||||+|||||..|+.... ....+++. + ++||+++||+...+.+ +.++.|+.+|++||+++++.
T Consensus 93 ~~~pv~v~ihGG~~~~g~~~~~--~~~~~~~~~~~~~vv~~~yRlg~~g~~~~~~~~~~~n~g~~D~~~al~wv~~~i~~ 170 (493)
T cd00312 93 NSLPVMVWIHGGGFMFGSGSLY--PGDGLAREGDNVIVVSINYRLGVLGFLSTGDIELPGNYGLKDQRLALKWVQDNIAA 170 (493)
T ss_pred CCCCEEEEEcCCccccCCCCCC--ChHHHHhcCCCEEEEEecccccccccccCCCCCCCcchhHHHHHHHHHHHHHHHHH
Confidence 6789999999999998887654 34556655 4 9999999998665432 45689999999999999999
Q ss_pred cCCCCCcEEEEEcCchHHHHHHHHHH
Q 012898 270 YGGDPDRIYLMGQSAGAHIAACTLLE 295 (454)
Q Consensus 270 ~g~d~~rI~l~G~S~GG~la~~~a~~ 295 (454)
||+|+++|+|+|+|+||+++..++..
T Consensus 171 fggd~~~v~~~G~SaG~~~~~~~~~~ 196 (493)
T cd00312 171 FGGDPDSVTIFGESAGGASVSLLLLS 196 (493)
T ss_pred hCCCcceEEEEeecHHHHHhhhHhhC
Confidence 99999999999999999999888765
No 14
>PHA02857 monoglyceride lipase; Provisional
Probab=99.75 E-value=3e-17 Score=159.87 Aligned_cols=222 Identities=18% Similarity=0.192 Sum_probs=137.5
Q ss_pred CCCCeeEEEEeeCCCCCCCcEEEEEcCCCccCCcccchhHHHHHHHhCCcEEEEEecCCCCCCCh--------hHHHHHH
Q 012898 185 DQPRNRLDLYFPKSSDGPKPVVAFITGGAWIIGYKAWGSLLGQQLSERDIIVACIDYRNFPQGTI--------KDMVKDA 256 (454)
Q Consensus 185 ~~~~~~l~vy~P~~~~~~~Pvvv~~HGgg~~~g~~~~~~~~~~~la~~G~~Vv~~dyr~~~~~~~--------~~~~~D~ 256 (454)
++..+...+|.|.+ .++++|+++||.+ ++...+..+++.|+++||.|+++|+||+|.+.. ...++|+
T Consensus 9 ~g~~l~~~~~~~~~--~~~~~v~llHG~~---~~~~~~~~~~~~l~~~g~~via~D~~G~G~S~~~~~~~~~~~~~~~d~ 83 (276)
T PHA02857 9 DNDYIYCKYWKPIT--YPKALVFISHGAG---EHSGRYEELAENISSLGILVFSHDHIGHGRSNGEKMMIDDFGVYVRDV 83 (276)
T ss_pred CCCEEEEEeccCCC--CCCEEEEEeCCCc---cccchHHHHHHHHHhCCCEEEEccCCCCCCCCCccCCcCCHHHHHHHH
Confidence 34446777888853 4568899999954 455667778999999999999999999986532 2335566
Q ss_pred HHHHHHHHHhhhhcCCCCCcEEEEEcCchHHHHHHHHHHHHHhhhCCCCCccc-chhh------h----hhhccccCC--
Q 012898 257 SQGISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLLEQAIKETGEGESTTW-SVSQ------I----RAYFGLSGG-- 323 (454)
Q Consensus 257 ~~al~~l~~~~~~~g~d~~rI~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~-~~~~------i----~~~~~~~g~-- 323 (454)
...++++++. ....+++|+|||+||.++..++.+.+....+....... .... + ...+.....
T Consensus 84 ~~~l~~~~~~-----~~~~~~~lvG~S~GG~ia~~~a~~~p~~i~~lil~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (276)
T PHA02857 84 VQHVVTIKST-----YPGVPVFLLGHSMGATISILAAYKNPNLFTAMILMSPLVNAEAVPRLNLLAAKLMGIFYPNKIVG 158 (276)
T ss_pred HHHHHHHHhh-----CCCCCEEEEEcCchHHHHHHHHHhCccccceEEEeccccccccccHHHHHHHHHHHHhCCCCccC
Confidence 6666655443 22357999999999999999887765432221100000 0000 0 000000000
Q ss_pred ------CCCChhhh--hcCCcccccC--C-----------Cc-cccccCCCCCEEEEEeCCCCCCChHHHHHHHHHHHHc
Q 012898 324 ------IMDGEESL--RQYSPEVLVQ--D-----------PN-TRHAVSLLPPIILFHGTADYSIPADASKNFANTLQRV 381 (454)
Q Consensus 324 ------~~~~~~~~--~~~~p~~~~~--~-----------~~-~~~~~~~~pPvLiihGe~D~~Vp~~~s~~l~~~l~~~ 381 (454)
........ ....+..... . .. .........|+|++||++|.++|.+.++++++.+..
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvliv~G~~D~i~~~~~~~~l~~~~~~- 237 (276)
T PHA02857 159 KLCPESVSRDMDEVYKYQYDPLVNHEKIKAGFASQVLKATNKVRKIIPKIKTPILILQGTNNEISDVSGAYYFMQHANC- 237 (276)
T ss_pred CCCHhhccCCHHHHHHHhcCCCccCCCccHHHHHHHHHHHHHHHHhcccCCCCEEEEecCCCCcCChHHHHHHHHHccC-
Confidence 00000000 0011100000 0 00 012234567999999999999999999999887743
Q ss_pred CCCEEEEEeCCCCccccccCCCCCCcHHHHHHHHHHHHHhc
Q 012898 382 GVRAESILYEGKTHTDLFLQDPMRGGKDDMFEDIVAIIHAD 422 (454)
Q Consensus 382 g~~vel~~~~g~~H~~~~l~~p~~~~~~~~~~~i~~Fl~~~ 422 (454)
++++.++++++|. +.... .+..+++++++.+||+++
T Consensus 238 --~~~~~~~~~~gH~-~~~e~--~~~~~~~~~~~~~~l~~~ 273 (276)
T PHA02857 238 --NREIKIYEGAKHH-LHKET--DEVKKSVMKEIETWIFNR 273 (276)
T ss_pred --CceEEEeCCCccc-ccCCc--hhHHHHHHHHHHHHHHHh
Confidence 5899999999998 44332 234789999999999986
No 15
>PRK13604 luxD acyl transferase; Provisional
Probab=99.75 E-value=3.3e-17 Score=160.21 Aligned_cols=202 Identities=13% Similarity=0.091 Sum_probs=123.0
Q ss_pred cCCCCeeEEEEe--eCC-CCCCCcEEEEEcCCCccCCcccchhHHHHHHHhCCcEEEEEecCCC-CCCC-------hhHH
Q 012898 184 GDQPRNRLDLYF--PKS-SDGPKPVVAFITGGAWIIGYKAWGSLLGQQLSERDIIVACIDYRNF-PQGT-------IKDM 252 (454)
Q Consensus 184 ~~~~~~~l~vy~--P~~-~~~~~Pvvv~~HGgg~~~g~~~~~~~~~~~la~~G~~Vv~~dyr~~-~~~~-------~~~~ 252 (454)
...++..+..|+ |++ ...+.++||+.||-+ +....+..++++|+++||.|+.+|+|++ |++. ....
T Consensus 15 ~~~dG~~L~Gwl~~P~~~~~~~~~~vIi~HGf~---~~~~~~~~~A~~La~~G~~vLrfD~rg~~GeS~G~~~~~t~s~g 91 (307)
T PRK13604 15 CLENGQSIRVWETLPKENSPKKNNTILIASGFA---RRMDHFAGLAEYLSSNGFHVIRYDSLHHVGLSSGTIDEFTMSIG 91 (307)
T ss_pred EcCCCCEEEEEEEcCcccCCCCCCEEEEeCCCC---CChHHHHHHHHHHHHCCCEEEEecCCCCCCCCCCccccCccccc
Confidence 445566666444 332 345678999999943 3444578899999999999999998865 6542 2345
Q ss_pred HHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCchHHHHHHHHHHHHHhhhCCCCCcccchhhhhhhcc-------c-----
Q 012898 253 VKDASQGISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLLEQAIKETGEGESTTWSVSQIRAYFG-------L----- 320 (454)
Q Consensus 253 ~~D~~~al~~l~~~~~~~g~d~~rI~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~~i~~~~~-------~----- 320 (454)
..|+.++++|++++ +.++|+|+||||||.++..+|.+.........++.......+...+. .
T Consensus 92 ~~Dl~aaid~lk~~------~~~~I~LiG~SmGgava~~~A~~~~v~~lI~~sp~~~l~d~l~~~~~~~~~~~p~~~lp~ 165 (307)
T PRK13604 92 KNSLLTVVDWLNTR------GINNLGLIAASLSARIAYEVINEIDLSFLITAVGVVNLRDTLERALGYDYLSLPIDELPE 165 (307)
T ss_pred HHHHHHHHHHHHhc------CCCceEEEEECHHHHHHHHHhcCCCCCEEEEcCCcccHHHHHHHhhhcccccCccccccc
Confidence 78999999999874 23589999999999998666653221100000111000001110000 0
Q ss_pred ----cCCCCCChhhhhcC-CcccccCCCccccccCCCCCEEEEEeCCCCCCChHHHHHHHHHHHHcCCCEEEEEeCCCCc
Q 012898 321 ----SGGIMDGEESLRQY-SPEVLVQDPNTRHAVSLLPPIILFHGTADYSIPADASKNFANTLQRVGVRAESILYEGKTH 395 (454)
Q Consensus 321 ----~g~~~~~~~~~~~~-~p~~~~~~~~~~~~~~~~pPvLiihGe~D~~Vp~~~s~~l~~~l~~~g~~vel~~~~g~~H 395 (454)
.|........+... ...................|+|++||+.|..||.+.+++++++++. .++++++++|++|
T Consensus 166 ~~d~~g~~l~~~~f~~~~~~~~~~~~~s~i~~~~~l~~PvLiIHG~~D~lVp~~~s~~l~e~~~s--~~kkl~~i~Ga~H 243 (307)
T PRK13604 166 DLDFEGHNLGSEVFVTDCFKHGWDTLDSTINKMKGLDIPFIAFTANNDSWVKQSEVIDLLDSIRS--EQCKLYSLIGSSH 243 (307)
T ss_pred ccccccccccHHHHHHHHHhcCccccccHHHHHhhcCCCEEEEEcCCCCccCHHHHHHHHHHhcc--CCcEEEEeCCCcc
Confidence 00000000111000 0000000111122333456999999999999999999999998763 4799999999999
Q ss_pred c
Q 012898 396 T 396 (454)
Q Consensus 396 ~ 396 (454)
.
T Consensus 244 ~ 244 (307)
T PRK13604 244 D 244 (307)
T ss_pred c
Confidence 8
No 16
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=99.75 E-value=2.7e-17 Score=160.91 Aligned_cols=211 Identities=18% Similarity=0.202 Sum_probs=127.1
Q ss_pred eeEEEEeeCC-CCCCCcEEEEEcCCCccCCcccchhH--HHHHHH-hCCcEEEEEec--CCCCCCC-------------h
Q 012898 189 NRLDLYFPKS-SDGPKPVVAFITGGAWIIGYKAWGSL--LGQQLS-ERDIIVACIDY--RNFPQGT-------------I 249 (454)
Q Consensus 189 ~~l~vy~P~~-~~~~~Pvvv~~HGgg~~~g~~~~~~~--~~~~la-~~G~~Vv~~dy--r~~~~~~-------------~ 249 (454)
..+.+|+|+. ..++.|+|+++||.+ ++...+.. ....++ +.|+.||++|+ |+.+... +
T Consensus 27 ~~~~v~~P~~~~~~~~P~vvllHG~~---~~~~~~~~~~~~~~la~~~g~~Vv~Pd~~~~g~~~~~~~~~w~~g~~~~~~ 103 (275)
T TIGR02821 27 MTFGVFLPPQAAAGPVPVLWYLSGLT---CTHENFMIKAGAQRFAAEHGLALVAPDTSPRGTGIAGEDDAWDFGKGAGFY 103 (275)
T ss_pred eEEEEEcCCCccCCCCCEEEEccCCC---CCccHHHhhhHHHHHHhhcCcEEEEeCCCCCcCCCCCCcccccccCCcccc
Confidence 4588999975 245689999999965 22222221 223444 55999999998 4332100 0
Q ss_pred --------hHHHHHHHHHHHHHHHhhh-hcCCCCCcEEEEEcCchHHHHHHHHHHHHHhhhCCCCCcccc-h-------h
Q 012898 250 --------KDMVKDASQGISFVCNNIS-EYGGDPDRIYLMGQSAGAHIAACTLLEQAIKETGEGESTTWS-V-------S 312 (454)
Q Consensus 250 --------~~~~~D~~~al~~l~~~~~-~~g~d~~rI~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~-~-------~ 312 (454)
.....+.....+.+...+. .+++|.++++|+|+||||++++.++.+++............. . .
T Consensus 104 ~d~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~~~~~~~~~~~~ 183 (275)
T TIGR02821 104 VDATEEPWSQHYRMYSYIVQELPALVAAQFPLDGERQGITGHSMGGHGALVIALKNPDRFKSVSAFAPIVAPSRCPWGQK 183 (275)
T ss_pred ccCCcCcccccchHHHHHHHHHHHHHHhhCCCCCCceEEEEEChhHHHHHHHHHhCcccceEEEEECCccCcccCcchHH
Confidence 0001111122223322232 357888999999999999999999988654432211100000 0 0
Q ss_pred hhhhhccccCCCCCChhhhhcCCcccccCCCccccccCCCCCEEEEEeCCCCCCCh-HHHHHHHHHHHHcCCCEEEEEeC
Q 012898 313 QIRAYFGLSGGIMDGEESLRQYSPEVLVQDPNTRHAVSLLPPIILFHGTADYSIPA-DASKNFANTLQRVGVRAESILYE 391 (454)
Q Consensus 313 ~i~~~~~~~g~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~pPvLiihGe~D~~Vp~-~~s~~l~~~l~~~g~~vel~~~~ 391 (454)
.+..+++ .....+...++... .......+|+++.||+.|..+|. .+...+.+++++.|.++++.++|
T Consensus 184 ~~~~~l~------~~~~~~~~~~~~~~------~~~~~~~~plli~~G~~D~~v~~~~~~~~~~~~l~~~g~~v~~~~~~ 251 (275)
T TIGR02821 184 AFSAYLG------ADEAAWRSYDASLL------VADGGRHSTILIDQGTADQFLDEQLRPDAFEQACRAAGQALTLRRQA 251 (275)
T ss_pred HHHHHhc------ccccchhhcchHHH------HhhcccCCCeeEeecCCCcccCccccHHHHHHHHHHcCCCeEEEEeC
Confidence 0011110 00011111111111 11123467999999999999998 68899999999999999999999
Q ss_pred CCCccccccCCCCCCcHHHHHHHHHHHHHhc
Q 012898 392 GKTHTDLFLQDPMRGGKDDMFEDIVAIIHAD 422 (454)
Q Consensus 392 g~~H~~~~l~~p~~~~~~~~~~~i~~Fl~~~ 422 (454)
|++|.+.+ ....+++.++|..++
T Consensus 252 g~~H~f~~--------~~~~~~~~~~~~~~~ 274 (275)
T TIGR02821 252 GYDHSYYF--------IASFIADHLRHHAER 274 (275)
T ss_pred CCCccchh--------HHHhHHHHHHHHHhh
Confidence 99999654 357788888887764
No 17
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=99.74 E-value=6.8e-17 Score=163.39 Aligned_cols=225 Identities=19% Similarity=0.222 Sum_probs=134.0
Q ss_pred eeEEEEeeCCCCCCCcEEEEEcCCCccCCcccchhHHHHHHHhCCcEEEEEecCCCCCCCh--------hHHHHHHHHHH
Q 012898 189 NRLDLYFPKSSDGPKPVVAFITGGAWIIGYKAWGSLLGQQLSERDIIVACIDYRNFPQGTI--------KDMVKDASQGI 260 (454)
Q Consensus 189 ~~l~vy~P~~~~~~~Pvvv~~HGgg~~~g~~~~~~~~~~~la~~G~~Vv~~dyr~~~~~~~--------~~~~~D~~~al 260 (454)
+....|.|.+. .++|+|||+||.+. ....++..++..|++.||.|+++||||+|.+.. ...++|+.+.+
T Consensus 74 l~~~~~~p~~~-~~~~~iv~lHG~~~--~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~dv~~~l 150 (349)
T PLN02385 74 IFSKSWLPENS-RPKAAVCFCHGYGD--TCTFFFEGIARKIASSGYGVFAMDYPGFGLSEGLHGYIPSFDDLVDDVIEHY 150 (349)
T ss_pred EEEEEEecCCC-CCCeEEEEECCCCC--ccchHHHHHHHHHHhCCCEEEEecCCCCCCCCCCCCCcCCHHHHHHHHHHHH
Confidence 44556777642 45689999999542 122234678889999999999999999986542 23345555555
Q ss_pred HHHHHhhhhcCCCCCcEEEEEcCchHHHHHHHHHHHHHhhhCCCCCccc--------chhhh-------hhhcc---ccC
Q 012898 261 SFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLLEQAIKETGEGESTTW--------SVSQI-------RAYFG---LSG 322 (454)
Q Consensus 261 ~~l~~~~~~~g~d~~rI~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~--------~~~~i-------~~~~~---~~g 322 (454)
+.+.... ..+..+++|+||||||.+++.++.+++....+....... ....+ ...+. +..
T Consensus 151 ~~l~~~~---~~~~~~~~LvGhSmGG~val~~a~~~p~~v~glVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 227 (349)
T PLN02385 151 SKIKGNP---EFRGLPSFLFGQSMGGAVALKVHLKQPNAWDGAILVAPMCKIADDVVPPPLVLQILILLANLLPKAKLVP 227 (349)
T ss_pred HHHHhcc---ccCCCCEEEEEeccchHHHHHHHHhCcchhhheeEecccccccccccCchHHHHHHHHHHHHCCCceecC
Confidence 5553321 234458999999999999999988766543322111100 00000 00000 000
Q ss_pred C------CCCCh--hhhhcCCcccccCCC-------------c-cccccCCCCCEEEEEeCCCCCCChHHHHHHHHHHHH
Q 012898 323 G------IMDGE--ESLRQYSPEVLVQDP-------------N-TRHAVSLLPPIILFHGTADYSIPADASKNFANTLQR 380 (454)
Q Consensus 323 ~------~~~~~--~~~~~~~p~~~~~~~-------------~-~~~~~~~~pPvLiihGe~D~~Vp~~~s~~l~~~l~~ 380 (454)
. ..... .....+......... . .....+...|+|++||++|.++|.+.++.+++.+..
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~i~~P~Lii~G~~D~vv~~~~~~~l~~~~~~ 307 (349)
T PLN02385 228 QKDLAELAFRDLKKRKMAEYNVIAYKDKPRLRTAVELLRTTQEIEMQLEEVSLPLLILHGEADKVTDPSVSKFLYEKASS 307 (349)
T ss_pred CCccccccccCHHHHHHhhcCcceeCCCcchHHHHHHHHHHHHHHHhcccCCCCEEEEEeCCCCccChHHHHHHHHHcCC
Confidence 0 00000 000000000000000 0 011234567999999999999999999999987752
Q ss_pred cCCCEEEEEeCCCCccccccCCCCCCcHHHHHHHHHHHHHhcC
Q 012898 381 VGVRAESILYEGKTHTDLFLQDPMRGGKDDMFEDIVAIIHADD 423 (454)
Q Consensus 381 ~g~~vel~~~~g~~H~~~~l~~p~~~~~~~~~~~i~~Fl~~~~ 423 (454)
.+++++++++++|. ++...| .+..+++++.|++||+++.
T Consensus 308 --~~~~l~~i~~~gH~-l~~e~p-~~~~~~v~~~i~~wL~~~~ 346 (349)
T PLN02385 308 --SDKKLKLYEDAYHS-ILEGEP-DEMIFQVLDDIISWLDSHS 346 (349)
T ss_pred --CCceEEEeCCCeee-cccCCC-hhhHHHHHHHHHHHHHHhc
Confidence 25789999999997 554444 1124568999999999875
No 18
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=99.73 E-value=6.6e-17 Score=145.42 Aligned_cols=197 Identities=21% Similarity=0.322 Sum_probs=149.4
Q ss_pred eeceeccCCCCeeEEEEeeCCCCCCCcEEEEEcCCCccCCcccchhHHHHHHHhCCcEEEEEecCCCCCC-ChhHHHHHH
Q 012898 178 RRGIVYGDQPRNRLDLYFPKSSDGPKPVVAFITGGAWIIGYKAWGSLLGQQLSERDIIVACIDYRNFPQG-TIKDMVKDA 256 (454)
Q Consensus 178 ~~~v~y~~~~~~~l~vy~P~~~~~~~Pvvv~~HGgg~~~g~~~~~~~~~~~la~~G~~Vv~~dyr~~~~~-~~~~~~~D~ 256 (454)
.+++.|+.++...+++|.|.+ ..|+.||+|||.|..|+.......+..+.++||.|++++|-++++. .+...+.|+
T Consensus 45 ~e~l~Yg~~g~q~VDIwg~~~---~~klfIfIHGGYW~~g~rk~clsiv~~a~~~gY~vasvgY~l~~q~htL~qt~~~~ 121 (270)
T KOG4627|consen 45 VEHLRYGEGGRQLVDIWGSTN---QAKLFIFIHGGYWQEGDRKMCLSIVGPAVRRGYRVASVGYNLCPQVHTLEQTMTQF 121 (270)
T ss_pred hhccccCCCCceEEEEecCCC---CccEEEEEecchhhcCchhcccchhhhhhhcCeEEEEeccCcCcccccHHHHHHHH
Confidence 578999999999999999965 3479999999999999999888888888899999999999999988 788889999
Q ss_pred HHHHHHHHHhhhhcCCCCCcEEEEEcCchHHHHHHHHHHHHHhhhCCCCCcccchhhhhhhccccCCCCCChhhhh----
Q 012898 257 SQGISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLLEQAIKETGEGESTTWSVSQIRAYFGLSGGIMDGEESLR---- 332 (454)
Q Consensus 257 ~~al~~l~~~~~~~g~d~~rI~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~~---- 332 (454)
...++|+.+... +.+.+.+.|||+|+++++.+.++.. .+++.+.+.++| ++...+...
T Consensus 122 ~~gv~filk~~~----n~k~l~~gGHSaGAHLa~qav~R~r-------------~prI~gl~l~~G-vY~l~EL~~te~g 183 (270)
T KOG4627|consen 122 THGVNFILKYTE----NTKVLTFGGHSAGAHLAAQAVMRQR-------------SPRIWGLILLCG-VYDLRELSNTESG 183 (270)
T ss_pred HHHHHHHHHhcc----cceeEEEcccchHHHHHHHHHHHhc-------------CchHHHHHHHhh-HhhHHHHhCCccc
Confidence 999999988643 4457999999999999999988743 345555555555 222111110
Q ss_pred ---cCCcccccCC-CccccccCCCCCEEEEEeCCCCCCChHHHHHHHHHHHHcCCCEEEEEeCCCCccccc
Q 012898 333 ---QYSPEVLVQD-PNTRHAVSLLPPIILFHGTADYSIPADASKNFANTLQRVGVRAESILYEGKTHTDLF 399 (454)
Q Consensus 333 ---~~~p~~~~~~-~~~~~~~~~~pPvLiihGe~D~~Vp~~~s~~l~~~l~~~g~~vel~~~~g~~H~~~~ 399 (454)
.+........ ..+.......-|+|++.|++|..-.++|.+.|++.+++ ..+.++++.+|..++
T Consensus 184 ~dlgLt~~~ae~~Scdl~~~~~v~~~ilVv~~~~espklieQnrdf~~q~~~----a~~~~f~n~~hy~I~ 250 (270)
T KOG4627|consen 184 NDLGLTERNAESVSCDLWEYTDVTVWILVVAAEHESPKLIEQNRDFADQLRK----ASFTLFKNYDHYDII 250 (270)
T ss_pred cccCcccchhhhcCccHHHhcCceeeeeEeeecccCcHHHHhhhhHHHHhhh----cceeecCCcchhhHH
Confidence 0011111111 11223333445899999999988888999999999884 789999999998554
No 19
>PRK10749 lysophospholipase L2; Provisional
Probab=99.72 E-value=1.2e-16 Score=160.38 Aligned_cols=210 Identities=18% Similarity=0.197 Sum_probs=126.6
Q ss_pred CCcEEEEEcCCCccCCcccchhHHHHHHHhCCcEEEEEecCCCCCCCh-------------hHHHHHHHHHHHHHHHhhh
Q 012898 202 PKPVVAFITGGAWIIGYKAWGSLLGQQLSERDIIVACIDYRNFPQGTI-------------KDMVKDASQGISFVCNNIS 268 (454)
Q Consensus 202 ~~Pvvv~~HGgg~~~g~~~~~~~~~~~la~~G~~Vv~~dyr~~~~~~~-------------~~~~~D~~~al~~l~~~~~ 268 (454)
+.++||++||. .++...+..++..+++.||.|+++|+||+|.+.. ....+|+...++.+.+
T Consensus 53 ~~~~vll~HG~---~~~~~~y~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~--- 126 (330)
T PRK10749 53 HDRVVVICPGR---IESYVKYAELAYDLFHLGYDVLIIDHRGQGRSGRLLDDPHRGHVERFNDYVDDLAAFWQQEIQ--- 126 (330)
T ss_pred CCcEEEEECCc---cchHHHHHHHHHHHHHCCCeEEEEcCCCCCCCCCCCCCCCcCccccHHHHHHHHHHHHHHHHh---
Confidence 45789999994 3455567778888999999999999999987632 2233444444443322
Q ss_pred hcCCCCCcEEEEEcCchHHHHHHHHHHHHHhhhCCCCCcccc------hhh----hhhhcc----------c-cCCCC--
Q 012898 269 EYGGDPDRIYLMGQSAGAHIAACTLLEQAIKETGEGESTTWS------VSQ----IRAYFG----------L-SGGIM-- 325 (454)
Q Consensus 269 ~~g~d~~rI~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~------~~~----i~~~~~----------~-~g~~~-- 325 (454)
. .+..+++++||||||.++..++.+++....+........ ... +..... . .+...
T Consensus 127 ~--~~~~~~~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (330)
T PRK10749 127 P--GPYRKRYALAHSMGGAILTLFLQRHPGVFDAIALCAPMFGIVLPLPSWMARRILNWAEGHPRIRDGYAIGTGRWRPL 204 (330)
T ss_pred c--CCCCCeEEEEEcHHHHHHHHHHHhCCCCcceEEEECchhccCCCCCcHHHHHHHHHHHHhcCCCCcCCCCCCCCCCC
Confidence 1 234689999999999999999887654322211110000 000 000000 0 00000
Q ss_pred --------CChhh----hhcC--Cccccc--------C------CCccccccCCCCCEEEEEeCCCCCCChHHHHHHHHH
Q 012898 326 --------DGEES----LRQY--SPEVLV--------Q------DPNTRHAVSLLPPIILFHGTADYSIPADASKNFANT 377 (454)
Q Consensus 326 --------~~~~~----~~~~--~p~~~~--------~------~~~~~~~~~~~pPvLiihGe~D~~Vp~~~s~~l~~~ 377 (454)
..... ...+ .+.... . ............|+|++||++|.+|+.+.++.+++.
T Consensus 205 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~Lii~G~~D~vv~~~~~~~~~~~ 284 (330)
T PRK10749 205 PFAINVLTHSRERYRRNLRFYADDPELRVGGPTYHWVRESILAGEQVLAGAGDITTPLLLLQAEEERVVDNRMHDRFCEA 284 (330)
T ss_pred CcCCCCCCCCHHHHHHHHHHHHhCCCcccCCCcHHHHHHHHHHHHHHHhhccCCCCCEEEEEeCCCeeeCHHHHHHHHHH
Confidence 00000 0000 010000 0 000012234556999999999999999999999999
Q ss_pred HHHcC---CCEEEEEeCCCCccccccCCCCCCcHHHHHHHHHHHHHhc
Q 012898 378 LQRVG---VRAESILYEGKTHTDLFLQDPMRGGKDDMFEDIVAIIHAD 422 (454)
Q Consensus 378 l~~~g---~~vel~~~~g~~H~~~~l~~p~~~~~~~~~~~i~~Fl~~~ 422 (454)
++..+ .++++++|+|++|. ++...+ ...++++++|++||+++
T Consensus 285 l~~~~~~~~~~~l~~~~gagH~-~~~E~~--~~r~~v~~~i~~fl~~~ 329 (330)
T PRK10749 285 RTAAGHPCEGGKPLVIKGAYHE-ILFEKD--AMRSVALNAIVDFFNRH 329 (330)
T ss_pred HhhcCCCCCCceEEEeCCCcch-hhhCCc--HHHHHHHHHHHHHHhhc
Confidence 98765 35689999999997 433321 23678999999999875
No 20
>PRK11460 putative hydrolase; Provisional
Probab=99.72 E-value=3.8e-16 Score=149.06 Aligned_cols=180 Identities=14% Similarity=0.080 Sum_probs=119.4
Q ss_pred CCCCcEEEEEcCCCccCCcccchhHHHHHHHhCCcEEEEEecCCC-------CCCCh-------hHHHHH----HHHHHH
Q 012898 200 DGPKPVVAFITGGAWIIGYKAWGSLLGQQLSERDIIVACIDYRNF-------PQGTI-------KDMVKD----ASQGIS 261 (454)
Q Consensus 200 ~~~~Pvvv~~HGgg~~~g~~~~~~~~~~~la~~G~~Vv~~dyr~~-------~~~~~-------~~~~~D----~~~al~ 261 (454)
..+.|+||++||.| ++...+..+++.|++.+..+..+.+++. +..++ .....+ +....+
T Consensus 13 ~~~~~~vIlLHG~G---~~~~~~~~l~~~l~~~~~~~~~i~~~g~~~~~~~~g~~W~~~~~~~~~~~~~~~~~~~~~l~~ 89 (232)
T PRK11460 13 KPAQQLLLLFHGVG---DNPVAMGEIGSWFAPAFPDALVVSVGGPEPSGNGAGRQWFSVQGITEDNRQARVAAIMPTFIE 89 (232)
T ss_pred CCCCcEEEEEeCCC---CChHHHHHHHHHHHHHCCCCEEECCCCCCCcCCCCCcccccCCCCCccchHHHHHHHHHHHHH
Confidence 34578999999954 5666677788889877644444444432 11111 011112 222334
Q ss_pred HHHHhhhhcCCCCCcEEEEEcCchHHHHHHHHHHHHHhhhCCCCCcccchhhhhhhccccCCCCCChhhhhcCCcccccC
Q 012898 262 FVCNNISEYGGDPDRIYLMGQSAGAHIAACTLLEQAIKETGEGESTTWSVSQIRAYFGLSGGIMDGEESLRQYSPEVLVQ 341 (454)
Q Consensus 262 ~l~~~~~~~g~d~~rI~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~~~~~p~~~~~ 341 (454)
++.....+++++++||+|+|+|+||.+++.++..++. .+...+.++|.... . +.
T Consensus 90 ~i~~~~~~~~~~~~~i~l~GfS~Gg~~al~~a~~~~~--------------~~~~vv~~sg~~~~-------~-~~---- 143 (232)
T PRK11460 90 TVRYWQQQSGVGASATALIGFSQGAIMALEAVKAEPG--------------LAGRVIAFSGRYAS-------L-PE---- 143 (232)
T ss_pred HHHHHHHhcCCChhhEEEEEECHHHHHHHHHHHhCCC--------------cceEEEEecccccc-------c-cc----
Confidence 4444445668898999999999999999988875321 11222333331100 0 00
Q ss_pred CCccccccCCCCCEEEEEeCCCCCCChHHHHHHHHHHHHcCCCEEEEEeCCCCccccccCCCCCCcHHHHHHHHHHHHHh
Q 012898 342 DPNTRHAVSLLPPIILFHGTADYSIPADASKNFANTLQRVGVRAESILYEGKTHTDLFLQDPMRGGKDDMFEDIVAIIHA 421 (454)
Q Consensus 342 ~~~~~~~~~~~pPvLiihGe~D~~Vp~~~s~~l~~~l~~~g~~vel~~~~g~~H~~~~l~~p~~~~~~~~~~~i~~Fl~~ 421 (454)
.....+|++++||++|.+||++.++++++.+++.|.++++++|++++|. + ..+.++++.+||.+
T Consensus 144 ------~~~~~~pvli~hG~~D~vvp~~~~~~~~~~L~~~g~~~~~~~~~~~gH~-i---------~~~~~~~~~~~l~~ 207 (232)
T PRK11460 144 ------TAPTATTIHLIHGGEDPVIDVAHAVAAQEALISLGGDVTLDIVEDLGHA-I---------DPRLMQFALDRLRY 207 (232)
T ss_pred ------cccCCCcEEEEecCCCCccCHHHHHHHHHHHHHCCCCeEEEEECCCCCC-C---------CHHHHHHHHHHHHH
Confidence 0112469999999999999999999999999999999999999999998 2 14777777888877
Q ss_pred cCh
Q 012898 422 DDQ 424 (454)
Q Consensus 422 ~~~ 424 (454)
...
T Consensus 208 ~l~ 210 (232)
T PRK11460 208 TVP 210 (232)
T ss_pred Hcc
Confidence 653
No 21
>PRK10115 protease 2; Provisional
Probab=99.71 E-value=2.4e-16 Score=172.04 Aligned_cols=229 Identities=17% Similarity=0.115 Sum_probs=149.0
Q ss_pred eeeceeccCCCCeeEEE---EeeCC-CCCCCcEEEEEcCCCccCCcccchhHHHHHHHhCCcEEEEEecCCCCCCCh---
Q 012898 177 VRRGIVYGDQPRNRLDL---YFPKS-SDGPKPVVAFITGGAWIIGYKAWGSLLGQQLSERDIIVACIDYRNFPQGTI--- 249 (454)
Q Consensus 177 ~~~~v~y~~~~~~~l~v---y~P~~-~~~~~Pvvv~~HGgg~~~g~~~~~~~~~~~la~~G~~Vv~~dyr~~~~~~~--- 249 (454)
..+.+.+.+.++..+.+ |.|.. ..++.|+||++|||..... ...+....+.|+++||+|+.+++||.++.+-
T Consensus 415 ~~e~v~~~s~DG~~Ip~~l~~~~~~~~~~~~P~ll~~hGg~~~~~-~p~f~~~~~~l~~rG~~v~~~n~RGs~g~G~~w~ 493 (686)
T PRK10115 415 RSEHLWITARDGVEVPVSLVYHRKHFRKGHNPLLVYGYGSYGASI-DADFSFSRLSLLDRGFVYAIVHVRGGGELGQQWY 493 (686)
T ss_pred EEEEEEEECCCCCEEEEEEEEECCCCCCCCCCEEEEEECCCCCCC-CCCccHHHHHHHHCCcEEEEEEcCCCCccCHHHH
Confidence 34566666677765553 33432 3456799999999754332 2334455678999999999999999765431
Q ss_pred --------hHHHHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCchHHHHHHHHHHHHHhhhCCCCCcccchhhhhh-----
Q 012898 250 --------KDMVKDASQGISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLLEQAIKETGEGESTTWSVSQIRA----- 316 (454)
Q Consensus 250 --------~~~~~D~~~al~~l~~~~~~~g~d~~rI~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~~i~~----- 316 (454)
...++|+.++++||.++. -.|++|++++|.|+||.++..++.+.++......+... ...+..
T Consensus 494 ~~g~~~~k~~~~~D~~a~~~~Lv~~g---~~d~~rl~i~G~S~GG~l~~~~~~~~Pdlf~A~v~~vp--~~D~~~~~~~~ 568 (686)
T PRK10115 494 EDGKFLKKKNTFNDYLDACDALLKLG---YGSPSLCYGMGGSAGGMLMGVAINQRPELFHGVIAQVP--FVDVVTTMLDE 568 (686)
T ss_pred HhhhhhcCCCcHHHHHHHHHHHHHcC---CCChHHeEEEEECHHHHHHHHHHhcChhheeEEEecCC--chhHhhhcccC
Confidence 135889999999998762 37999999999999999999998877665443322111 111111
Q ss_pred -------hccccCCCCCC--hhhhhcCCcccccCCCccccccCCCCC-EEEEEeCCCCCCChHHHHHHHHHHHHcCCCEE
Q 012898 317 -------YFGLSGGIMDG--EESLRQYSPEVLVQDPNTRHAVSLLPP-IILFHGTADYSIPADASKNFANTLQRVGVRAE 386 (454)
Q Consensus 317 -------~~~~~g~~~~~--~~~~~~~~p~~~~~~~~~~~~~~~~pP-vLiihGe~D~~Vp~~~s~~l~~~l~~~g~~ve 386 (454)
.+...|..... .+.+..++|..... +..-| +|++||++|..||+.++.+++++|++.|.+++
T Consensus 569 ~~p~~~~~~~e~G~p~~~~~~~~l~~~SP~~~v~--------~~~~P~lLi~~g~~D~RV~~~~~~k~~a~Lr~~~~~~~ 640 (686)
T PRK10115 569 SIPLTTGEFEEWGNPQDPQYYEYMKSYSPYDNVT--------AQAYPHLLVTTGLHDSQVQYWEPAKWVAKLRELKTDDH 640 (686)
T ss_pred CCCCChhHHHHhCCCCCHHHHHHHHHcCchhccC--------ccCCCceeEEecCCCCCcCchHHHHHHHHHHhcCCCCc
Confidence 11112211111 12334455554332 22335 78889999999999999999999999999988
Q ss_pred EEEe---CCCCccccccCCCCCCcHHHHHHHHHHHHHhcC
Q 012898 387 SILY---EGKTHTDLFLQDPMRGGKDDMFEDIVAIIHADD 423 (454)
Q Consensus 387 l~~~---~g~~H~~~~l~~p~~~~~~~~~~~i~~Fl~~~~ 423 (454)
++++ +++||+..- .+...-+.......|+-...
T Consensus 641 ~vl~~~~~~~GHg~~~----~r~~~~~~~A~~~aFl~~~~ 676 (686)
T PRK10115 641 LLLLCTDMDSGHGGKS----GRFKSYEGVAMEYAFLIALA 676 (686)
T ss_pred eEEEEecCCCCCCCCc----CHHHHHHHHHHHHHHHHHHh
Confidence 8888 999998211 11122233344466666544
No 22
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.71 E-value=2.2e-16 Score=148.13 Aligned_cols=200 Identities=21% Similarity=0.276 Sum_probs=138.0
Q ss_pred eeEEEEeeCCCCCCCcEEEEEcCCCccCCcccchhHHHHHHHhC-CcEEEEEecCCCCCCChh----HHHHHHHHHHHHH
Q 012898 189 NRLDLYFPKSSDGPKPVVAFITGGAWIIGYKAWGSLLGQQLSER-DIIVACIDYRNFPQGTIK----DMVKDASQGISFV 263 (454)
Q Consensus 189 ~~l~vy~P~~~~~~~Pvvv~~HGgg~~~g~~~~~~~~~~~la~~-G~~Vv~~dyr~~~~~~~~----~~~~D~~~al~~l 263 (454)
.....|+-.. ....++++|.||++...| ....+...|..+ ++.|+++||+|+|.+... ....|+.++.+|+
T Consensus 47 ~~~~~y~~~~-~~~~~~lly~hGNa~Dlg---q~~~~~~~l~~~ln~nv~~~DYSGyG~S~G~psE~n~y~Di~avye~L 122 (258)
T KOG1552|consen 47 EIVCMYVRPP-EAAHPTLLYSHGNAADLG---QMVELFKELSIFLNCNVVSYDYSGYGRSSGKPSERNLYADIKAVYEWL 122 (258)
T ss_pred EEEEEEEcCc-cccceEEEEcCCcccchH---HHHHHHHHHhhcccceEEEEecccccccCCCcccccchhhHHHHHHHH
Confidence 3444444332 235689999999865444 444456666665 999999999999876542 4688999999999
Q ss_pred HHhhhhcCCCCCcEEEEEcCchHHHHHHHHHHHHHhhhCCCCCcccchhhhhhhccccCCCCCChhhhhc-CC-cccccC
Q 012898 264 CNNISEYGGDPDRIYLMGQSAGAHIAACTLLEQAIKETGEGESTTWSVSQIRAYFGLSGGIMDGEESLRQ-YS-PEVLVQ 341 (454)
Q Consensus 264 ~~~~~~~g~d~~rI~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~~~-~~-p~~~~~ 341 (454)
++. +| .+++|+|+|+|+|...++.+|.+.+ +.+.+..++ .....+.+.. .. ......
T Consensus 123 r~~---~g-~~~~Iil~G~SiGt~~tv~Lasr~~----------------~~alVL~SP-f~S~~rv~~~~~~~~~~~d~ 181 (258)
T KOG1552|consen 123 RNR---YG-SPERIILYGQSIGTVPTVDLASRYP----------------LAAVVLHSP-FTSGMRVAFPDTKTTYCFDA 181 (258)
T ss_pred Hhh---cC-CCceEEEEEecCCchhhhhHhhcCC----------------cceEEEecc-chhhhhhhccCcceEEeecc
Confidence 985 45 7789999999999999999888753 122222111 1111000000 00 000001
Q ss_pred CCccccccCCCCCEEEEEeCCCCCCChHHHHHHHHHHHHcCCCEEEEEeCCCCccccccCCCCCCcHHHHHHHHHHHHHh
Q 012898 342 DPNTRHAVSLLPPIILFHGTADYSIPADASKNFANTLQRVGVRAESILYEGKTHTDLFLQDPMRGGKDDMFEDIVAIIHA 421 (454)
Q Consensus 342 ~~~~~~~~~~~pPvLiihGe~D~~Vp~~~s~~l~~~l~~~g~~vel~~~~g~~H~~~~l~~p~~~~~~~~~~~i~~Fl~~ 421 (454)
...+..+....+|+|++||++|++||..++.++++++++ ++|..+..|+||.++.+. .++++.+..|+..
T Consensus 182 f~~i~kI~~i~~PVLiiHgtdDevv~~sHg~~Lye~~k~---~~epl~v~g~gH~~~~~~-------~~yi~~l~~f~~~ 251 (258)
T KOG1552|consen 182 FPNIEKISKITCPVLIIHGTDDEVVDFSHGKALYERCKE---KVEPLWVKGAGHNDIELY-------PEYIEHLRRFISS 251 (258)
T ss_pred ccccCcceeccCCEEEEecccCceecccccHHHHHhccc---cCCCcEEecCCCcccccC-------HHHHHHHHHHHHH
Confidence 111345555677999999999999999999999999986 589999999999955432 5899999999886
Q ss_pred cC
Q 012898 422 DD 423 (454)
Q Consensus 422 ~~ 423 (454)
-.
T Consensus 252 ~~ 253 (258)
T KOG1552|consen 252 VL 253 (258)
T ss_pred hc
Confidence 54
No 23
>KOG4389 consensus Acetylcholinesterase/Butyrylcholinesterase [Signal transduction mechanisms]
Probab=99.70 E-value=1.8e-17 Score=165.82 Aligned_cols=156 Identities=24% Similarity=0.358 Sum_probs=125.6
Q ss_pred hhhhhhcCChh-----------------HHHHHHHHhHhhhhcCCCcccccccccccc---ceeeceeccCCCCeeEEEE
Q 012898 135 KLLRYLGVGYR-----------------WIVRFLALGCYSLLLLPGFIQVGCHYFFSS---QVRRGIVYGDQPRNRLDLY 194 (454)
Q Consensus 135 ~~~~~lg~~~~-----------------w~~~~~~~~~~~~~~~p~~~~~~~~~~~~~---~~~~~v~y~~~~~~~l~vy 194 (454)
++-.|+||||+ |...+.+ ..+...|+|..+.|+..+ +.+..-.--+++|+++|||
T Consensus 52 ~V~aFlGIPfAePPvg~~RFkkP~p~~pW~g~ldA-----tt~a~~C~Q~~D~yfp~F~GsEMWNpNt~lSEDCLYlNVW 126 (601)
T KOG4389|consen 52 PVSAFLGIPFAEPPVGDLRFKKPEPKQPWSGVLDA-----TTLANTCYQTRDTYFPGFWGSEMWNPNTELSEDCLYLNVW 126 (601)
T ss_pred eEEEEecCccCCCCCccccCCCCCcCCCccceecc-----cccchhhhccccccCCCCCcccccCCCCCcChhceEEEEe
Confidence 47788899987 5444444 778899999887776543 3343344446788889999
Q ss_pred eeCCCCCCCcEEEEEcCCCccCCcccchhHHHHHHHhC-CcEEEEEecCCCCCC----------ChhHHHHHHHHHHHHH
Q 012898 195 FPKSSDGPKPVVAFITGGAWIIGYKAWGSLLGQQLSER-DIIVACIDYRNFPQG----------TIKDMVKDASQGISFV 263 (454)
Q Consensus 195 ~P~~~~~~~Pvvv~~HGgg~~~g~~~~~~~~~~~la~~-G~~Vv~~dyr~~~~~----------~~~~~~~D~~~al~~l 263 (454)
.|.....+.-|+|||.||||..|+.....+.++.|+.. +.+||.++||+++.+ +.+.++.|++.|++||
T Consensus 127 ~P~~~p~n~tVlVWiyGGGF~sGt~SLdvYdGk~la~~envIvVs~NYRvG~FGFL~l~~~~eaPGNmGl~DQqLAl~WV 206 (601)
T KOG4389|consen 127 APAADPYNLTVLVWIYGGGFYSGTPSLDVYDGKFLAAVENVIVVSMNYRVGAFGFLYLPGHPEAPGNMGLLDQQLALQWV 206 (601)
T ss_pred ccCCCCCCceEEEEEEcCccccCCcceeeeccceeeeeccEEEEEeeeeeccceEEecCCCCCCCCccchHHHHHHHHHH
Confidence 99643445559999999999999998888889999988 899999999986544 3456799999999999
Q ss_pred HHhhhhcCCCCCcEEEEEcCchHHHHHHHHHH
Q 012898 264 CNNISEYGGDPDRIYLMGQSAGAHIAACTLLE 295 (454)
Q Consensus 264 ~~~~~~~g~d~~rI~l~G~S~GG~la~~~a~~ 295 (454)
++++..||+||+||.|+|.|+|+..+..+++.
T Consensus 207 ~~Ni~aFGGnp~~vTLFGESAGaASv~aHLls 238 (601)
T KOG4389|consen 207 QENIAAFGGNPSRVTLFGESAGAASVVAHLLS 238 (601)
T ss_pred HHhHHHhCCCcceEEEeccccchhhhhheecC
Confidence 99999999999999999999999988766553
No 24
>PLN02442 S-formylglutathione hydrolase
Probab=99.69 E-value=8.9e-16 Score=150.84 Aligned_cols=214 Identities=18% Similarity=0.253 Sum_probs=126.8
Q ss_pred CeeEEEEeeCC-CCCCCcEEEEEcCCCccCCcccchhHHHHHHHhCCcEEEEEecCCCC-----C----------CCh--
Q 012898 188 RNRLDLYFPKS-SDGPKPVVAFITGGAWIIGYKAWGSLLGQQLSERDIIVACIDYRNFP-----Q----------GTI-- 249 (454)
Q Consensus 188 ~~~l~vy~P~~-~~~~~Pvvv~~HGgg~~~g~~~~~~~~~~~la~~G~~Vv~~dyr~~~-----~----------~~~-- 249 (454)
...+.+|+|+. ..++.|+|+|+||.+...........+.+.++..|++||++|....+ . +.+
T Consensus 31 ~~~~~vy~P~~~~~~~~Pvv~~lHG~~~~~~~~~~~~~~~~~~~~~g~~Vv~pd~~~~g~~~~~~~~~~~~~~~~~~~~~ 110 (283)
T PLN02442 31 SMTFSVYFPPASDSGKVPVLYWLSGLTCTDENFIQKSGAQRAAAARGIALVAPDTSPRGLNVEGEADSWDFGVGAGFYLN 110 (283)
T ss_pred ceEEEEEcCCcccCCCCCEEEEecCCCcChHHHHHhhhHHHHHhhcCeEEEecCCCCCCCCCCCCccccccCCCcceeec
Confidence 35788999974 24578999999995422111111122446667779999999975322 0 000
Q ss_pred ---h-----HHHH-HHHHHHHHHHHhhhhcCCCCCcEEEEEcCchHHHHHHHHHHHHHhhhCCCCCcc--------cchh
Q 012898 250 ---K-----DMVK-DASQGISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLLEQAIKETGEGESTT--------WSVS 312 (454)
Q Consensus 250 ---~-----~~~~-D~~~al~~l~~~~~~~g~d~~rI~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~--------~~~~ 312 (454)
+ .... ......+++.+.... +|+++++|+|+|+||++++.++.+++........... +...
T Consensus 111 ~~~~~~~~~~~~~~~~~~l~~~i~~~~~~--~~~~~~~i~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~~~~~~~~~~~~ 188 (283)
T PLN02442 111 ATQEKWKNWRMYDYVVKELPKLLSDNFDQ--LDTSRASIFGHSMGGHGALTIYLKNPDKYKSVSAFAPIANPINCPWGQK 188 (283)
T ss_pred cccCCCcccchhhhHHHHHHHHHHHHHHh--cCCCceEEEEEChhHHHHHHHHHhCchhEEEEEEECCccCcccCchhhH
Confidence 0 0011 122233444443332 5788999999999999999999987654321100000 0000
Q ss_pred hhhhhccccCCCCCChhhhhcCCcccccCCCccccccCCCCCEEEEEeCCCCCCChH-HHHHHHHHHHHcCCCEEEEEeC
Q 012898 313 QIRAYFGLSGGIMDGEESLRQYSPEVLVQDPNTRHAVSLLPPIILFHGTADYSIPAD-ASKNFANTLQRVGVRAESILYE 391 (454)
Q Consensus 313 ~i~~~~~~~g~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~pPvLiihGe~D~~Vp~~-~s~~l~~~l~~~g~~vel~~~~ 391 (454)
.+..++ + .....+..+.+... +.......+|++++||++|..++.. +++.+++.+++.|.++++++++
T Consensus 189 ~~~~~~---g---~~~~~~~~~d~~~~-----~~~~~~~~~pvli~~G~~D~~v~~~~~s~~~~~~l~~~g~~~~~~~~p 257 (283)
T PLN02442 189 AFTNYL---G---SDKADWEEYDATEL-----VSKFNDVSATILIDQGEADKFLKEQLLPENFEEACKEAGAPVTLRLQP 257 (283)
T ss_pred HHHHHc---C---CChhhHHHcChhhh-----hhhccccCCCEEEEECCCCccccccccHHHHHHHHHHcCCCeEEEEeC
Confidence 111111 1 01112222222211 1122234569999999999999864 6899999999999999999999
Q ss_pred CCCccccccCCCCCCcHHHHHHHHHHHHHhc
Q 012898 392 GKTHTDLFLQDPMRGGKDDMFEDIVAIIHAD 422 (454)
Q Consensus 392 g~~H~~~~l~~p~~~~~~~~~~~i~~Fl~~~ 422 (454)
|.+|.+. ....++++.+.|..++
T Consensus 258 g~~H~~~--------~~~~~i~~~~~~~~~~ 280 (283)
T PLN02442 258 GYDHSYF--------FIATFIDDHINHHAQA 280 (283)
T ss_pred CCCccHH--------HHHHHHHHHHHHHHHH
Confidence 9999844 2345556666666554
No 25
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=99.69 E-value=4.8e-16 Score=135.87 Aligned_cols=145 Identities=25% Similarity=0.370 Sum_probs=107.3
Q ss_pred EEEEEcCCCccCCcccchhHHHHHHHhCCcEEEEEecCCCCCCChhHHHHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCc
Q 012898 205 VVAFITGGAWIIGYKAWGSLLGQQLSERDIIVACIDYRNFPQGTIKDMVKDASQGISFVCNNISEYGGDPDRIYLMGQSA 284 (454)
Q Consensus 205 vvv~~HGgg~~~g~~~~~~~~~~~la~~G~~Vv~~dyr~~~~~~~~~~~~D~~~al~~l~~~~~~~g~d~~rI~l~G~S~ 284 (454)
+||++||++ ++...+..+++.|++.||.|+.+||++.+... ...+....++++.+. + .|+++|+++|||+
T Consensus 1 ~vv~~HG~~---~~~~~~~~~~~~l~~~G~~v~~~~~~~~~~~~---~~~~~~~~~~~~~~~---~-~~~~~i~l~G~S~ 70 (145)
T PF12695_consen 1 VVVLLHGWG---GSRRDYQPLAEALAEQGYAVVAFDYPGHGDSD---GADAVERVLADIRAG---Y-PDPDRIILIGHSM 70 (145)
T ss_dssp EEEEECTTT---TTTHHHHHHHHHHHHTTEEEEEESCTTSTTSH---HSHHHHHHHHHHHHH---H-CTCCEEEEEEETH
T ss_pred CEEEECCCC---CCHHHHHHHHHHHHHCCCEEEEEecCCCCccc---hhHHHHHHHHHHHhh---c-CCCCcEEEEEEcc
Confidence 589999975 34556778999999999999999999888763 233555566655422 2 2788999999999
Q ss_pred hHHHHHHHHHHHHHhhhCCCCCcccchhhhhhhccccCCCCCChhhhhcCCcccccCCCccccccCCCCCEEEEEeCCCC
Q 012898 285 GAHIAACTLLEQAIKETGEGESTTWSVSQIRAYFGLSGGIMDGEESLRQYSPEVLVQDPNTRHAVSLLPPIILFHGTADY 364 (454)
Q Consensus 285 GG~la~~~a~~~~~~~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~pPvLiihGe~D~ 364 (454)
||.+++.++.+. ..+++.+.+.+ ... .........|++++||++|.
T Consensus 71 Gg~~a~~~~~~~---------------~~v~~~v~~~~-~~~------------------~~~~~~~~~pv~~i~g~~D~ 116 (145)
T PF12695_consen 71 GGAIAANLAARN---------------PRVKAVVLLSP-YPD------------------SEDLAKIRIPVLFIHGENDP 116 (145)
T ss_dssp HHHHHHHHHHHS---------------TTESEEEEESE-SSG------------------CHHHTTTTSEEEEEEETT-S
T ss_pred CcHHHHHHhhhc---------------cceeEEEEecC-ccc------------------hhhhhccCCcEEEEEECCCC
Confidence 999999998852 34555555544 100 01112233499999999999
Q ss_pred CCChHHHHHHHHHHHHcCCCEEEEEeCCCCcc
Q 012898 365 SIPADASKNFANTLQRVGVRAESILYEGKTHT 396 (454)
Q Consensus 365 ~Vp~~~s~~l~~~l~~~g~~vel~~~~g~~H~ 396 (454)
.++.++.++++++++ .+.++++++|++|+
T Consensus 117 ~~~~~~~~~~~~~~~---~~~~~~~i~g~~H~ 145 (145)
T PF12695_consen 117 LVPPEQVRRLYEALP---GPKELYIIPGAGHF 145 (145)
T ss_dssp SSHHHHHHHHHHHHC---SSEEEEEETTS-TT
T ss_pred cCCHHHHHHHHHHcC---CCcEEEEeCCCcCc
Confidence 999999999999887 47999999999995
No 26
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=99.69 E-value=1.6e-16 Score=149.33 Aligned_cols=173 Identities=17% Similarity=0.217 Sum_probs=106.6
Q ss_pred EEEeeCCCCCCCcEEEEEcCCCccCCcccchhHHHHHHHhCCcEEEEEecCCCCCCC-----h--------hHHHHHHHH
Q 012898 192 DLYFPKSSDGPKPVVAFITGGAWIIGYKAWGSLLGQQLSERDIIVACIDYRNFPQGT-----I--------KDMVKDASQ 258 (454)
Q Consensus 192 ~vy~P~~~~~~~Pvvv~~HGgg~~~g~~~~~~~~~~~la~~G~~Vv~~dyr~~~~~~-----~--------~~~~~D~~~ 258 (454)
.+|+|++..++.|+||++||+++..........+...+.+.||+|+++|+++.+... + .....|+..
T Consensus 2 ~ly~P~~~~~~~P~vv~lHG~~~~~~~~~~~~~~~~~a~~~g~~Vv~Pd~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (212)
T TIGR01840 2 YVYVPAGLTGPRALVLALHGCGQTASAYVIDWGWKAAADRYGFVLVAPEQTSYNSSNNCWDWFFTHHRARGTGEVESLHQ 81 (212)
T ss_pred EEEcCCCCCCCCCEEEEeCCCCCCHHHHhhhcChHHHHHhCCeEEEecCCcCccccCCCCCCCCccccCCCCccHHHHHH
Confidence 588998766789999999998753322211112445555669999999999854211 1 123456666
Q ss_pred HHHHHHHhhhhcCCCCCcEEEEEcCchHHHHHHHHHHHHHhhhCCCCCcccchhhhhhhccccCCCCCCh----hhhhcC
Q 012898 259 GISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLLEQAIKETGEGESTTWSVSQIRAYFGLSGGIMDGE----ESLRQY 334 (454)
Q Consensus 259 al~~l~~~~~~~g~d~~rI~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~~i~~~~~~~g~~~~~~----~~~~~~ 334 (454)
.++++.+ ++++|++||+|+|+|+||.+++.++.+++..... .+.++|...... ......
T Consensus 82 ~i~~~~~---~~~id~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~--------------~~~~~g~~~~~~~~~~~~~~~~ 144 (212)
T TIGR01840 82 LIDAVKA---NYSIDPNRVYVTGLSAGGGMTAVLGCTYPDVFAG--------------GASNAGLPYGEASSSISATPQM 144 (212)
T ss_pred HHHHHHH---hcCcChhheEEEEECHHHHHHHHHHHhCchhheE--------------EEeecCCcccccccchhhHhhc
Confidence 6676665 4678999999999999999999999876543322 222222110000 000000
Q ss_pred Cc-c---cccC--CCccccccCCCCCEEEEEeCCCCCCChHHHHHHHHHHHHc
Q 012898 335 SP-E---VLVQ--DPNTRHAVSLLPPIILFHGTADYSIPADASKNFANTLQRV 381 (454)
Q Consensus 335 ~p-~---~~~~--~~~~~~~~~~~pPvLiihGe~D~~Vp~~~s~~l~~~l~~~ 381 (454)
.. . .+.. ...........||++|+||++|.+||.+.++++++.+++.
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~i~hG~~D~vVp~~~~~~~~~~l~~~ 197 (212)
T TIGR01840 145 CTAATAASVCRLVRGMQSEYNGPTPIMSVVHGDADYTVLPGNADEIRDAMLKV 197 (212)
T ss_pred CCCCCHHHHHHHHhccCCcccCCCCeEEEEEcCCCceeCcchHHHHHHHHHHh
Confidence 00 0 0000 0000111223467889999999999999999999999875
No 27
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=99.67 E-value=1.8e-15 Score=156.20 Aligned_cols=224 Identities=16% Similarity=0.069 Sum_probs=131.6
Q ss_pred eceeccCCC--CeeEEEEeeCCCCCCCcEEEEEcCCCccCCcc-cchhHHHHHHHhCCcEEEEEecCCCCCCCh----hH
Q 012898 179 RGIVYGDQP--RNRLDLYFPKSSDGPKPVVAFITGGAWIIGYK-AWGSLLGQQLSERDIIVACIDYRNFPQGTI----KD 251 (454)
Q Consensus 179 ~~v~y~~~~--~~~l~vy~P~~~~~~~Pvvv~~HGgg~~~g~~-~~~~~~~~~la~~G~~Vv~~dyr~~~~~~~----~~ 251 (454)
+.+.+...+ .+...++.|+ ..++.|+||++||.+ +.. ..+..+++.|+++||.|+++|+|++|++.. ..
T Consensus 169 e~v~i~~~~g~~l~g~l~~P~-~~~~~P~Vli~gG~~---~~~~~~~~~~~~~La~~Gy~vl~~D~pG~G~s~~~~~~~d 244 (414)
T PRK05077 169 KELEFPIPGGGPITGFLHLPK-GDGPFPTVLVCGGLD---SLQTDYYRLFRDYLAPRGIAMLTIDMPSVGFSSKWKLTQD 244 (414)
T ss_pred EEEEEEcCCCcEEEEEEEECC-CCCCccEEEEeCCcc---cchhhhHHHHHHHHHhCCCEEEEECCCCCCCCCCCCcccc
Confidence 344443333 3566677887 356788888766632 222 345567889999999999999999887632 12
Q ss_pred HHHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCchHHHHHHHHHHHHHhhhCCCCCcc-cc-----hhhh-------hhhc
Q 012898 252 MVKDASQGISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLLEQAIKETGEGESTT-WS-----VSQI-------RAYF 318 (454)
Q Consensus 252 ~~~D~~~al~~l~~~~~~~g~d~~rI~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~-~~-----~~~i-------~~~~ 318 (454)
......++++|+.+.. .+|.+||+++|+|+||++++.++...+.+......... .. .... ...+
T Consensus 245 ~~~~~~avld~l~~~~---~vd~~ri~l~G~S~GG~~Al~~A~~~p~ri~a~V~~~~~~~~~~~~~~~~~~~p~~~~~~l 321 (414)
T PRK05077 245 SSLLHQAVLNALPNVP---WVDHTRVAAFGFRFGANVAVRLAYLEPPRLKAVACLGPVVHTLLTDPKRQQQVPEMYLDVL 321 (414)
T ss_pred HHHHHHHHHHHHHhCc---ccCcccEEEEEEChHHHHHHHHHHhCCcCceEEEEECCccchhhcchhhhhhchHHHHHHH
Confidence 2223346677776542 36889999999999999999998765432211111000 00 0000 0000
Q ss_pred -cccCCCCCChhhhhcCCcccccCCCccccccCCCCCEEEEEeCCCCCCChHHHHHHHHHHHHcCCCEEEEEeCCCCccc
Q 012898 319 -GLSGGIMDGEESLRQYSPEVLVQDPNTRHAVSLLPPIILFHGTADYSIPADASKNFANTLQRVGVRAESILYEGKTHTD 397 (454)
Q Consensus 319 -~~~g~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~pPvLiihGe~D~~Vp~~~s~~l~~~l~~~g~~vel~~~~g~~H~~ 397 (454)
...+........+.............. ...+...|+|++||++|.++|.++++.+++... +.+++++++. |.
T Consensus 322 a~~lg~~~~~~~~l~~~l~~~sl~~~~~-l~~~i~~PvLiI~G~~D~ivP~~~a~~l~~~~~----~~~l~~i~~~-~~- 394 (414)
T PRK05077 322 ASRLGMHDASDEALRVELNRYSLKVQGL-LGRRCPTPMLSGYWKNDPFSPEEDSRLIASSSA----DGKLLEIPFK-PV- 394 (414)
T ss_pred HHHhCCCCCChHHHHHHhhhccchhhhh-hccCCCCcEEEEecCCCCCCCHHHHHHHHHhCC----CCeEEEccCC-Cc-
Confidence 000000000011100000000000000 012345699999999999999999998876654 5789999986 32
Q ss_pred cccCCCCCCcHHHHHHHHHHHHHhcC
Q 012898 398 LFLQDPMRGGKDDMFEDIVAIIHADD 423 (454)
Q Consensus 398 ~~l~~p~~~~~~~~~~~i~~Fl~~~~ 423 (454)
.+..+++++.+.+||+++.
T Consensus 395 -------~e~~~~~~~~i~~wL~~~l 413 (414)
T PRK05077 395 -------YRNFDKALQEISDWLEDRL 413 (414)
T ss_pred -------cCCHHHHHHHHHHHHHHHh
Confidence 1245899999999998763
No 28
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.66 E-value=6.8e-15 Score=140.54 Aligned_cols=198 Identities=19% Similarity=0.273 Sum_probs=149.4
Q ss_pred CeeEEEEeeCCCCCCCcEEEEEcCCCccCCcccchhHHHHHHHhCCcEEEEEecCCC--CC-----------------CC
Q 012898 188 RNRLDLYFPKSSDGPKPVVAFITGGAWIIGYKAWGSLLGQQLSERDIIVACIDYRNF--PQ-----------------GT 248 (454)
Q Consensus 188 ~~~l~vy~P~~~~~~~Pvvv~~HGgg~~~g~~~~~~~~~~~la~~G~~Vv~~dyr~~--~~-----------------~~ 248 (454)
.....++.|+...+. |+||++|+ +.|-.......+++||++||+|+++|.-.. .. ..
T Consensus 13 ~~~~~~a~P~~~~~~-P~VIv~he---i~Gl~~~i~~~a~rlA~~Gy~v~~Pdl~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (236)
T COG0412 13 ELPAYLARPAGAGGF-PGVIVLHE---IFGLNPHIRDVARRLAKAGYVVLAPDLYGRQGDPTDIEDEPAELETGLVERVD 88 (236)
T ss_pred eEeEEEecCCcCCCC-CEEEEEec---ccCCchHHHHHHHHHHhCCcEEEechhhccCCCCCcccccHHHHhhhhhccCC
Confidence 456677888765444 99999999 456667888899999999999999996431 10 01
Q ss_pred hhHHHHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCchHHHHHHHHHHHHHhhhCCCCCcccchhhhhhhccccCCCCCCh
Q 012898 249 IKDMVKDASQGISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLLEQAIKETGEGESTTWSVSQIRAYFGLSGGIMDGE 328 (454)
Q Consensus 249 ~~~~~~D~~~al~~l~~~~~~~g~d~~rI~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~~i~~~~~~~g~~~~~~ 328 (454)
......|+.++++|+..+.. +++++|+++|+|+||.+++.++.+. ..+++.+..+|......
T Consensus 89 ~~~~~~d~~a~~~~L~~~~~---~~~~~ig~~GfC~GG~~a~~~a~~~---------------~~v~a~v~fyg~~~~~~ 150 (236)
T COG0412 89 PAEVLADIDAALDYLARQPQ---VDPKRIGVVGFCMGGGLALLAATRA---------------PEVKAAVAFYGGLIADD 150 (236)
T ss_pred HHHHHHHHHHHHHHHHhCCC---CCCceEEEEEEcccHHHHHHhhccc---------------CCccEEEEecCCCCCCc
Confidence 13457788999999987643 7889999999999999999998763 14556666665322110
Q ss_pred hhhhcCCcccccCCCccccccCCCCCEEEEEeCCCCCCChHHHHHHHHHHHHcCCCEEEEEeCCCCccccccC-----CC
Q 012898 329 ESLRQYSPEVLVQDPNTRHAVSLLPPIILFHGTADYSIPADASKNFANTLQRVGVRAESILYEGKTHTDLFLQ-----DP 403 (454)
Q Consensus 329 ~~~~~~~p~~~~~~~~~~~~~~~~pPvLiihGe~D~~Vp~~~s~~l~~~l~~~g~~vel~~~~g~~H~~~~l~-----~p 403 (454)
. ....+...|+|+.+|+.|..+|...-..+.+.+.+.+..+++.+|+++.|.|.... ..
T Consensus 151 ~----------------~~~~~~~~pvl~~~~~~D~~~p~~~~~~~~~~~~~~~~~~~~~~y~ga~H~F~~~~~~~~~~y 214 (236)
T COG0412 151 T----------------ADAPKIKVPVLLHLAGEDPYIPAADVDALAAALEDAGVKVDLEIYPGAGHGFANDRADYHPGY 214 (236)
T ss_pred c----------------cccccccCcEEEEecccCCCCChhHHHHHHHHHHhcCCCeeEEEeCCCccccccCCCcccccC
Confidence 0 11223456999999999999999999999999999988999999999999955432 23
Q ss_pred CCCcHHHHHHHHHHHHHhcC
Q 012898 404 MRGGKDDMFEDIVAIIHADD 423 (454)
Q Consensus 404 ~~~~~~~~~~~i~~Fl~~~~ 423 (454)
.....++.++++++|+++..
T Consensus 215 ~~~aa~~a~~~~~~ff~~~~ 234 (236)
T COG0412 215 DAAAAEDAWQRVLAFFKRLL 234 (236)
T ss_pred CHHHHHHHHHHHHHHHHHhc
Confidence 44556889999999998765
No 29
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=99.65 E-value=4.6e-15 Score=152.16 Aligned_cols=228 Identities=19% Similarity=0.234 Sum_probs=137.5
Q ss_pred ceeccCCC-CeeEEEEeeCCCCCCCcEEEEEcCCCccCCcccchhHHHHHHHhCCcEEEEEecCCCCCCCh--------h
Q 012898 180 GIVYGDQP-RNRLDLYFPKSSDGPKPVVAFITGGAWIIGYKAWGSLLGQQLSERDIIVACIDYRNFPQGTI--------K 250 (454)
Q Consensus 180 ~v~y~~~~-~~~l~vy~P~~~~~~~Pvvv~~HGgg~~~g~~~~~~~~~~~la~~G~~Vv~~dyr~~~~~~~--------~ 250 (454)
-+.|+.++ .+....|.|.. ...+++|||+||.+ ++...+..++..|+++||.|+++|+|+++.+.. .
T Consensus 113 ~~~~~~~~~~l~~~~~~p~~-~~~~~~Vl~lHG~~---~~~~~~~~~a~~L~~~Gy~V~~~D~rGhG~S~~~~~~~~~~~ 188 (395)
T PLN02652 113 SLFYGARRNALFCRSWAPAA-GEMRGILIIIHGLN---EHSGRYLHFAKQLTSCGFGVYAMDWIGHGGSDGLHGYVPSLD 188 (395)
T ss_pred EEEECCCCCEEEEEEecCCC-CCCceEEEEECCch---HHHHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCCCCcCHH
Confidence 33444332 34667888854 23568999999953 344456778999999999999999999986542 2
Q ss_pred HHHHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCchHHHHHHHHHHHHH---hhhCCCCCccc---c--hh---hhhhhc-
Q 012898 251 DMVKDASQGISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLLEQAI---KETGEGESTTW---S--VS---QIRAYF- 318 (454)
Q Consensus 251 ~~~~D~~~al~~l~~~~~~~g~d~~rI~l~G~S~GG~la~~~a~~~~~---~~~~~~~~~~~---~--~~---~i~~~~- 318 (454)
...+|+..+++++.... +..+++|+|||+||.+++.++.+ +. ...+......+ . .. .+...+
T Consensus 189 ~~~~Dl~~~l~~l~~~~-----~~~~i~lvGhSmGG~ial~~a~~-p~~~~~v~glVL~sP~l~~~~~~~~~~~~~~l~~ 262 (395)
T PLN02652 189 YVVEDTEAFLEKIRSEN-----PGVPCFLFGHSTGGAVVLKAASY-PSIEDKLEGIVLTSPALRVKPAHPIVGAVAPIFS 262 (395)
T ss_pred HHHHHHHHHHHHHHHhC-----CCCCEEEEEECHHHHHHHHHHhc-cCcccccceEEEECcccccccchHHHHHHHHHHH
Confidence 34667777777776531 22479999999999999877643 21 11111000000 0 00 000000
Q ss_pred ------cccCCC-----C-CCh-hhhhcC-CcccccCCC--------------ccccccCCCCCEEEEEeCCCCCCChHH
Q 012898 319 ------GLSGGI-----M-DGE-ESLRQY-SPEVLVQDP--------------NTRHAVSLLPPIILFHGTADYSIPADA 370 (454)
Q Consensus 319 ------~~~g~~-----~-~~~-~~~~~~-~p~~~~~~~--------------~~~~~~~~~pPvLiihGe~D~~Vp~~~ 370 (454)
...+.. . ... .....+ .+....... ......+...|+|++||++|.++|.+.
T Consensus 263 ~~~p~~~~~~~~~~~~~~s~~~~~~~~~~~dp~~~~g~i~~~~~~~~~~~~~~l~~~L~~I~vPvLIi~G~~D~vvp~~~ 342 (395)
T PLN02652 263 LVAPRFQFKGANKRGIPVSRDPAALLAKYSDPLVYTGPIRVRTGHEILRISSYLTRNFKSVTVPFMVLHGTADRVTDPLA 342 (395)
T ss_pred HhCCCCcccCcccccCCcCCCHHHHHHHhcCCCcccCCchHHHHHHHHHHHHHHHhhcccCCCCEEEEEeCCCCCCCHHH
Confidence 000000 0 000 001111 111000000 001223445799999999999999999
Q ss_pred HHHHHHHHHHcCCCEEEEEeCCCCccccccCCCCCCcHHHHHHHHHHHHHhcCh
Q 012898 371 SKNFANTLQRVGVRAESILYEGKTHTDLFLQDPMRGGKDDMFEDIVAIIHADDQ 424 (454)
Q Consensus 371 s~~l~~~l~~~g~~vel~~~~g~~H~~~~l~~p~~~~~~~~~~~i~~Fl~~~~~ 424 (454)
++++++.+.. ..+++++|++++|. ++.. + ..+++++++.+||.++..
T Consensus 343 a~~l~~~~~~--~~k~l~~~~ga~H~-l~~e-~---~~e~v~~~I~~FL~~~~~ 389 (395)
T PLN02652 343 SQDLYNEAAS--RHKDIKLYDGFLHD-LLFE-P---EREEVGRDIIDWMEKRLD 389 (395)
T ss_pred HHHHHHhcCC--CCceEEEECCCeEE-eccC-C---CHHHHHHHHHHHHHHHhh
Confidence 9999998653 35788999999997 4332 2 468999999999998753
No 30
>COG1647 Esterase/lipase [General function prediction only]
Probab=99.64 E-value=1.9e-15 Score=138.08 Aligned_cols=202 Identities=18% Similarity=0.226 Sum_probs=139.2
Q ss_pred cEEEEEcCCCccCCcccchhHHHHHHHhCCcEEEEEecCCCCCCC-------hhHHHHHHHHHHHHHHHhhhhcCCCCCc
Q 012898 204 PVVAFITGGAWIIGYKAWGSLLGQQLSERDIIVACIDYRNFPQGT-------IKDMVKDASQGISFVCNNISEYGGDPDR 276 (454)
Q Consensus 204 Pvvv~~HGgg~~~g~~~~~~~~~~~la~~G~~Vv~~dyr~~~~~~-------~~~~~~D~~~al~~l~~~~~~~g~d~~r 276 (454)
-.|+++|| ..|+......+++.|.++||.|.+|.|+|++..+ ..+.++|+.++++.+.+. |. +.
T Consensus 16 ~AVLllHG---FTGt~~Dvr~Lgr~L~e~GyTv~aP~ypGHG~~~e~fl~t~~~DW~~~v~d~Y~~L~~~----gy--~e 86 (243)
T COG1647 16 RAVLLLHG---FTGTPRDVRMLGRYLNENGYTVYAPRYPGHGTLPEDFLKTTPRDWWEDVEDGYRDLKEA----GY--DE 86 (243)
T ss_pred EEEEEEec---cCCCcHHHHHHHHHHHHCCceEecCCCCCCCCCHHHHhcCCHHHHHHHHHHHHHHHHHc----CC--Ce
Confidence 68999999 5789999999999999999999999999987653 457889999999999865 23 48
Q ss_pred EEEEEcCchHHHHHHHHHHHHHhhhCCCCCccc---chhhhhhhcc---c----cCC-CCCChhhhhcCCcccccC----
Q 012898 277 IYLMGQSAGAHIAACTLLEQAIKETGEGESTTW---SVSQIRAYFG---L----SGG-IMDGEESLRQYSPEVLVQ---- 341 (454)
Q Consensus 277 I~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~---~~~~i~~~~~---~----~g~-~~~~~~~~~~~~p~~~~~---- 341 (454)
|++.|.||||-+++.++.+.+.+.....+.... ....+..+.. - .+. .......+..+.+.....
T Consensus 87 I~v~GlSmGGv~alkla~~~p~K~iv~m~a~~~~k~~~~iie~~l~y~~~~kk~e~k~~e~~~~e~~~~~~~~~~~~~~~ 166 (243)
T COG1647 87 IAVVGLSMGGVFALKLAYHYPPKKIVPMCAPVNVKSWRIIIEGLLEYFRNAKKYEGKDQEQIDKEMKSYKDTPMTTTAQL 166 (243)
T ss_pred EEEEeecchhHHHHHHHhhCCccceeeecCCcccccchhhhHHHHHHHHHhhhccCCCHHHHHHHHHHhhcchHHHHHHH
Confidence 999999999999999999876554332111110 0111111111 0 000 000111122222110000
Q ss_pred ----CCccccccCCCCCEEEEEeCCCCCCChHHHHHHHHHHHHcCCCEEEEEeCCCCccccccCCCCCCcHHHHHHHHHH
Q 012898 342 ----DPNTRHAVSLLPPIILFHGTADYSIPADASKNFANTLQRVGVRAESILYEGKTHTDLFLQDPMRGGKDDMFEDIVA 417 (454)
Q Consensus 342 ----~~~~~~~~~~~pPvLiihGe~D~~Vp~~~s~~l~~~l~~~g~~vel~~~~g~~H~~~~l~~p~~~~~~~~~~~i~~ 417 (454)
......+..+..|++++.|.+|..||.+.+..+++.+.. .+.++..|++.||. +. .....+.+.+++++
T Consensus 167 ~~~i~~~~~~~~~I~~pt~vvq~~~D~mv~~~sA~~Iy~~v~s--~~KeL~~~e~SgHV-It----~D~Erd~v~e~V~~ 239 (243)
T COG1647 167 KKLIKDARRSLDKIYSPTLVVQGRQDEMVPAESANFIYDHVES--DDKELKWLEGSGHV-IT----LDKERDQVEEDVIT 239 (243)
T ss_pred HHHHHHHHhhhhhcccchhheecccCCCCCHHHHHHHHHhccC--CcceeEEEccCCce-ee----cchhHHHHHHHHHH
Confidence 000122333456999999999999999999999999864 47899999999997 32 33478999999999
Q ss_pred HHHh
Q 012898 418 IIHA 421 (454)
Q Consensus 418 Fl~~ 421 (454)
||+.
T Consensus 240 FL~~ 243 (243)
T COG1647 240 FLEK 243 (243)
T ss_pred HhhC
Confidence 9973
No 31
>PRK00870 haloalkane dehalogenase; Provisional
Probab=99.64 E-value=5.5e-15 Score=146.15 Aligned_cols=223 Identities=13% Similarity=0.103 Sum_probs=128.6
Q ss_pred CCeeEEEEeeCCCCCCCcEEEEEcCCCccCCcccchhHHHHHHHhCCcEEEEEecCCCCCCChhHH--HHHHHHHHHHHH
Q 012898 187 PRNRLDLYFPKSSDGPKPVVAFITGGAWIIGYKAWGSLLGQQLSERDIIVACIDYRNFPQGTIKDM--VKDASQGISFVC 264 (454)
Q Consensus 187 ~~~~l~vy~P~~~~~~~Pvvv~~HGgg~~~g~~~~~~~~~~~la~~G~~Vv~~dyr~~~~~~~~~~--~~D~~~al~~l~ 264 (454)
++...++++.....+..|.|||+||.+ ++...|..+...|++.||.|+++|.|++|.+..+.. ..+.....+++.
T Consensus 30 ~~~~~~i~y~~~G~~~~~~lvliHG~~---~~~~~w~~~~~~L~~~gy~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~~l~ 106 (302)
T PRK00870 30 DGGPLRMHYVDEGPADGPPVLLLHGEP---SWSYLYRKMIPILAAAGHRVIAPDLIGFGRSDKPTRREDYTYARHVEWMR 106 (302)
T ss_pred CCceEEEEEEecCCCCCCEEEEECCCC---CchhhHHHHHHHHHhCCCEEEEECCCCCCCCCCCCCcccCCHHHHHHHHH
Confidence 344455555543333457899999953 445566778889988899999999999998754321 112223333444
Q ss_pred HhhhhcCCCCCcEEEEEcCchHHHHHHHHHHHHHhhhCCCCCcc-cc------hhhhhhhcc---c----------c-CC
Q 012898 265 NNISEYGGDPDRIYLMGQSAGAHIAACTLLEQAIKETGEGESTT-WS------VSQIRAYFG---L----------S-GG 323 (454)
Q Consensus 265 ~~~~~~g~d~~rI~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~-~~------~~~i~~~~~---~----------~-g~ 323 (454)
+.+.+.++ +++.|+|||+||.++..++.+++........... .. ......+.. . . +.
T Consensus 107 ~~l~~l~~--~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (302)
T PRK00870 107 SWFEQLDL--TDVTLVCQDWGGLIGLRLAAEHPDRFARLVVANTGLPTGDGPMPDAFWAWRAFSQYSPVLPVGRLVNGGT 184 (302)
T ss_pred HHHHHcCC--CCEEEEEEChHHHHHHHHHHhChhheeEEEEeCCCCCCccccchHHHhhhhcccccCchhhHHHHhhccc
Confidence 44444344 4799999999999999999886654332211000 00 000000000 0 0 00
Q ss_pred C-CCChhhhhcCC----ccc-------c---c-C---CC-------ccccccCCCCCEEEEEeCCCCCCChHHHHHHHHH
Q 012898 324 I-MDGEESLRQYS----PEV-------L---V-Q---DP-------NTRHAVSLLPPIILFHGTADYSIPADASKNFANT 377 (454)
Q Consensus 324 ~-~~~~~~~~~~~----p~~-------~---~-~---~~-------~~~~~~~~~pPvLiihGe~D~~Vp~~~s~~l~~~ 377 (454)
. ....+....+. ... . . . .. ......+...|++++||+.|.++|... +.+.+.
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~-~~~~~~ 263 (302)
T PRK00870 185 VRDLSDAVRAAYDAPFPDESYKAGARAFPLLVPTSPDDPAVAANRAAWAVLERWDKPFLTAFSDSDPITGGGD-AILQKR 263 (302)
T ss_pred cccCCHHHHHHhhcccCChhhhcchhhhhhcCCCCCCCcchHHHHHHHHhhhcCCCceEEEecCCCCcccCch-HHHHhh
Confidence 0 00001011110 000 0 0 0 00 001224556799999999999999765 777777
Q ss_pred HHHcCCCEEEEEeCCCCccccccCCCCCCcHHHHHHHHHHHHHhc
Q 012898 378 LQRVGVRAESILYEGKTHTDLFLQDPMRGGKDDMFEDIVAIIHAD 422 (454)
Q Consensus 378 l~~~g~~vel~~~~g~~H~~~~l~~p~~~~~~~~~~~i~~Fl~~~ 422 (454)
+... ..+++.++++++|. .++..| +++.+.+.+|++++
T Consensus 264 ~~~~-~~~~~~~i~~~gH~-~~~e~p-----~~~~~~l~~fl~~~ 301 (302)
T PRK00870 264 IPGA-AGQPHPTIKGAGHF-LQEDSG-----EELAEAVLEFIRAT 301 (302)
T ss_pred cccc-cccceeeecCCCcc-chhhCh-----HHHHHHHHHHHhcC
Confidence 6531 12347899999998 555544 89999999999865
No 32
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=99.63 E-value=9e-15 Score=137.92 Aligned_cols=183 Identities=21% Similarity=0.257 Sum_probs=106.9
Q ss_pred CCCCcEEEEEcCCCccCCcccchhHHHH-HHHhCCcEEEEEecCC------CCC---CChh---------HHHHHHHHHH
Q 012898 200 DGPKPVVAFITGGAWIIGYKAWGSLLGQ-QLSERDIIVACIDYRN------FPQ---GTIK---------DMVKDASQGI 260 (454)
Q Consensus 200 ~~~~Pvvv~~HGgg~~~g~~~~~~~~~~-~la~~G~~Vv~~dyr~------~~~---~~~~---------~~~~D~~~al 260 (454)
.+..|+|||+||-|. +...+..... .+...+..+++++-+. .+. .+++ ....++....
T Consensus 11 ~~~~~lvi~LHG~G~---~~~~~~~~~~~~~~~~~~~~i~p~ap~~~~~~~~g~~~~~Wf~~~~~~~~~~~~~~~i~~s~ 87 (216)
T PF02230_consen 11 GKAKPLVILLHGYGD---SEDLFALLAELNLALPNTRFISPRAPSRPVTVPGGYRMPAWFDIYDFDPEGPEDEAGIEESA 87 (216)
T ss_dssp ST-SEEEEEE--TTS----HHHHHHHHHHHTCSTTEEEEEE---EEE-GGGTT-EEE-SS-BSCSSSSSEB-HHHHHHHH
T ss_pred CCCceEEEEECCCCC---CcchhHHHHhhcccCCceEEEeccCCCCCcccccccCCCceeeccCCCcchhhhHHHHHHHH
Confidence 356789999999542 2222222222 1222367777664321 121 1111 1123333333
Q ss_pred HHHHHh---hhhcCCCCCcEEEEEcCchHHHHHHHHHHHHHhhhCCCCCcccchhhhhhhccccCCCCCChhhhhcCCcc
Q 012898 261 SFVCNN---ISEYGGDPDRIYLMGQSAGAHIAACTLLEQAIKETGEGESTTWSVSQIRAYFGLSGGIMDGEESLRQYSPE 337 (454)
Q Consensus 261 ~~l~~~---~~~~g~d~~rI~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~~~~~p~ 337 (454)
+.+.+. ..+.+++++||+|+|+|+||.+++.++++. +..+.+.+.++|....... +...
T Consensus 88 ~~l~~li~~~~~~~i~~~ri~l~GFSQGa~~al~~~l~~--------------p~~~~gvv~lsG~~~~~~~-~~~~--- 149 (216)
T PF02230_consen 88 ERLDELIDEEVAYGIDPSRIFLGGFSQGAAMALYLALRY--------------PEPLAGVVALSGYLPPESE-LEDR--- 149 (216)
T ss_dssp HHHHHHHHHHHHTT--GGGEEEEEETHHHHHHHHHHHCT--------------SSTSSEEEEES---TTGCC-CHCC---
T ss_pred HHHHHHHHHHHHcCCChhheehhhhhhHHHHHHHHHHHc--------------CcCcCEEEEeecccccccc-cccc---
Confidence 333322 224579999999999999999999999864 3456677777773221110 0000
Q ss_pred cccCCCccccccCCCCCEEEEEeCCCCCCChHHHHHHHHHHHHcCCCEEEEEeCCCCccccccCCCCCCcHHHHHHHHHH
Q 012898 338 VLVQDPNTRHAVSLLPPIILFHGTADYSIPADASKNFANTLQRVGVRAESILYEGKTHTDLFLQDPMRGGKDDMFEDIVA 417 (454)
Q Consensus 338 ~~~~~~~~~~~~~~~pPvLiihGe~D~~Vp~~~s~~l~~~l~~~g~~vel~~~~g~~H~~~~l~~p~~~~~~~~~~~i~~ 417 (454)
.......|++++||+.|++||.+.+++.++.|++.+.+++++.|+|++|. + ..+.++++.+
T Consensus 150 ---------~~~~~~~pi~~~hG~~D~vvp~~~~~~~~~~L~~~~~~v~~~~~~g~gH~-i---------~~~~~~~~~~ 210 (216)
T PF02230_consen 150 ---------PEALAKTPILIIHGDEDPVVPFEWAEKTAEFLKAAGANVEFHEYPGGGHE-I---------SPEELRDLRE 210 (216)
T ss_dssp ---------HCCCCTS-EEEEEETT-SSSTHHHHHHHHHHHHCTT-GEEEEEETT-SSS------------HHHHHHHHH
T ss_pred ---------ccccCCCcEEEEecCCCCcccHHHHHHHHHHHHhcCCCEEEEEcCCCCCC-C---------CHHHHHHHHH
Confidence 00001359999999999999999999999999999999999999999998 2 2688899999
Q ss_pred HHHhc
Q 012898 418 IIHAD 422 (454)
Q Consensus 418 Fl~~~ 422 (454)
||+++
T Consensus 211 ~l~~~ 215 (216)
T PF02230_consen 211 FLEKH 215 (216)
T ss_dssp HHHHH
T ss_pred HHhhh
Confidence 99875
No 33
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=99.63 E-value=1.2e-15 Score=138.37 Aligned_cols=222 Identities=15% Similarity=0.215 Sum_probs=152.1
Q ss_pred eceeccCCCCeeEEEEeeCCCCCCCcEEEEEcCCCccCCcccchhHHHHHHHhC-CcEEEEEecCCCCCCChh----HHH
Q 012898 179 RGIVYGDQPRNRLDLYFPKSSDGPKPVVAFITGGAWIIGYKAWGSLLGQQLSER-DIIVACIDYRNFPQGTIK----DMV 253 (454)
Q Consensus 179 ~~v~y~~~~~~~l~vy~P~~~~~~~Pvvv~~HGgg~~~g~~~~~~~~~~~la~~-G~~Vv~~dyr~~~~~~~~----~~~ 253 (454)
+.+...+.+.++++-|.-.+ +...|+++++|+++ |+.......+..+-.+ +..|+.++|||+|.+... .-.
T Consensus 55 e~i~l~T~D~vtL~a~~~~~-E~S~pTlLyfh~NA---GNmGhr~~i~~~fy~~l~mnv~ivsYRGYG~S~GspsE~GL~ 130 (300)
T KOG4391|consen 55 ERIELRTRDKVTLDAYLMLS-ESSRPTLLYFHANA---GNMGHRLPIARVFYVNLKMNVLIVSYRGYGKSEGSPSEEGLK 130 (300)
T ss_pred eEEEEEcCcceeEeeeeecc-cCCCceEEEEccCC---CcccchhhHHHHHHHHcCceEEEEEeeccccCCCCcccccee
Confidence 45556678888888887764 44789999999975 4444444455555544 999999999999887643 235
Q ss_pred HHHHHHHHHHHHhhhhcCCCCCcEEEEEcCchHHHHHHHHHHHHHhhhCCCCCccc-ch-hhhhhh-ccccCCCCCChhh
Q 012898 254 KDASQGISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLLEQAIKETGEGESTTW-SV-SQIRAY-FGLSGGIMDGEES 330 (454)
Q Consensus 254 ~D~~~al~~l~~~~~~~g~d~~rI~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~-~~-~~i~~~-~~~~g~~~~~~~~ 330 (454)
.|..++++++.++.. .|..++++.|.|.||++|..+|.+..++-.+......+ +. ...... +...+... ..-.
T Consensus 131 lDs~avldyl~t~~~---~dktkivlfGrSlGGAvai~lask~~~ri~~~ivENTF~SIp~~~i~~v~p~~~k~i-~~lc 206 (300)
T KOG4391|consen 131 LDSEAVLDYLMTRPD---LDKTKIVLFGRSLGGAVAIHLASKNSDRISAIIVENTFLSIPHMAIPLVFPFPMKYI-PLLC 206 (300)
T ss_pred ccHHHHHHHHhcCcc---CCcceEEEEecccCCeeEEEeeccchhheeeeeeechhccchhhhhheeccchhhHH-HHHH
Confidence 699999999988753 78889999999999999999998766543332111111 00 111111 11110000 0000
Q ss_pred hh-cCCcccccCCCccccccCCCCCEEEEEeCCCCCCChHHHHHHHHHHHHcCCCEEEEEeCCCCccccccCCCCCCcHH
Q 012898 331 LR-QYSPEVLVQDPNTRHAVSLLPPIILFHGTADYSIPADASKNFANTLQRVGVRAESILYEGKTHTDLFLQDPMRGGKD 409 (454)
Q Consensus 331 ~~-~~~p~~~~~~~~~~~~~~~~pPvLiihGe~D~~Vp~~~s~~l~~~l~~~g~~vel~~~~g~~H~~~~l~~p~~~~~~ 409 (454)
.+ .|... ..+.....|+|++.|.+|.+||+.+.+.+++.+... ..++.+||++.|++.++. +
T Consensus 207 ~kn~~~S~--------~ki~~~~~P~LFiSGlkDelVPP~~Mr~Ly~~c~S~--~Krl~eFP~gtHNDT~i~-------d 269 (300)
T KOG4391|consen 207 YKNKWLSY--------RKIGQCRMPFLFISGLKDELVPPVMMRQLYELCPSR--TKRLAEFPDGTHNDTWIC-------D 269 (300)
T ss_pred HHhhhcch--------hhhccccCceEEeecCccccCCcHHHHHHHHhCchh--hhhheeCCCCccCceEEe-------c
Confidence 01 11111 112223359999999999999999999999988654 678999999999988876 5
Q ss_pred HHHHHHHHHHHhcChh
Q 012898 410 DMFEDIVAIIHADDQE 425 (454)
Q Consensus 410 ~~~~~i~~Fl~~~~~~ 425 (454)
.+++.|.+|+.+....
T Consensus 270 GYfq~i~dFlaE~~~~ 285 (300)
T KOG4391|consen 270 GYFQAIEDFLAEVVKS 285 (300)
T ss_pred cHHHHHHHHHHHhccC
Confidence 7899999999987654
No 34
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=99.62 E-value=1e-14 Score=142.06 Aligned_cols=215 Identities=15% Similarity=0.099 Sum_probs=121.2
Q ss_pred EEEEeeCCCCCCCcEEEEEcCCCccCCcccchhHHHHHHHhCCcEEEEEecCCCCCCChhH--HHHHHHHHHHHHHHhhh
Q 012898 191 LDLYFPKSSDGPKPVVAFITGGAWIIGYKAWGSLLGQQLSERDIIVACIDYRNFPQGTIKD--MVKDASQGISFVCNNIS 268 (454)
Q Consensus 191 l~vy~P~~~~~~~Pvvv~~HGgg~~~g~~~~~~~~~~~la~~G~~Vv~~dyr~~~~~~~~~--~~~D~~~al~~l~~~~~ 268 (454)
+.+++.... +.|.||++||.+........+......+++.||.|+++|+||+|.+..+. ...+. ...+.+.+.+.
T Consensus 20 ~~~~y~~~g--~~~~ivllHG~~~~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~-~~~~~l~~~l~ 96 (282)
T TIGR03343 20 FRIHYNEAG--NGEAVIMLHGGGPGAGGWSNYYRNIGPFVDAGYRVILKDSPGFNKSDAVVMDEQRGL-VNARAVKGLMD 96 (282)
T ss_pred eeEEEEecC--CCCeEEEECCCCCchhhHHHHHHHHHHHHhCCCEEEEECCCCCCCCCCCcCcccccc-hhHHHHHHHHH
Confidence 444444432 34689999995422211111112345667779999999999998876431 11110 11233333333
Q ss_pred hcCCCCCcEEEEEcCchHHHHHHHHHHHHHhhhCCCCCcc----------cchhhhhhhcc---------------cc--
Q 012898 269 EYGGDPDRIYLMGQSAGAHIAACTLLEQAIKETGEGESTT----------WSVSQIRAYFG---------------LS-- 321 (454)
Q Consensus 269 ~~g~d~~rI~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~----------~~~~~i~~~~~---------------~~-- 321 (454)
.+ +.++++++|||+||.+++.++.+++.+......... .........+. ..
T Consensus 97 ~l--~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (282)
T TIGR03343 97 AL--DIEKAHLVGNSMGGATALNFALEYPDRIGKLILMGPGGLGPSLFAPMPMEGIKLLFKLYAEPSYETLKQMLNVFLF 174 (282)
T ss_pred Hc--CCCCeeEEEECchHHHHHHHHHhChHhhceEEEECCCCCCccccccCchHHHHHHHHHhcCCCHHHHHHHHhhCcc
Confidence 33 446999999999999999999887655332211000 00000000000 00
Q ss_pred CCCCCChhhhh----cC--Cccc----c-------cCC-CccccccCCCCCEEEEEeCCCCCCChHHHHHHHHHHHHcCC
Q 012898 322 GGIMDGEESLR----QY--SPEV----L-------VQD-PNTRHAVSLLPPIILFHGTADYSIPADASKNFANTLQRVGV 383 (454)
Q Consensus 322 g~~~~~~~~~~----~~--~p~~----~-------~~~-~~~~~~~~~~pPvLiihGe~D~~Vp~~~s~~l~~~l~~~g~ 383 (454)
........... .. .+.. . ... ...........|+|+++|++|..+|.+.++++++.++
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlli~G~~D~~v~~~~~~~~~~~~~---- 250 (282)
T TIGR03343 175 DQSLITEELLQGRWENIQRQPEHLKNFLISSQKAPLSTWDVTARLGEIKAKTLVTWGRDDRFVPLDHGLKLLWNMP---- 250 (282)
T ss_pred CcccCcHHHHHhHHHHhhcCHHHHHHHHHhccccccccchHHHHHhhCCCCEEEEEccCCCcCCchhHHHHHHhCC----
Confidence 00000000000 00 0000 0 000 0011233456799999999999999999999988775
Q ss_pred CEEEEEeCCCCccccccCCCCCCcHHHHHHHHHHHHH
Q 012898 384 RAESILYEGKTHTDLFLQDPMRGGKDDMFEDIVAIIH 420 (454)
Q Consensus 384 ~vel~~~~g~~H~~~~l~~p~~~~~~~~~~~i~~Fl~ 420 (454)
++++++++++||. ..... .+++.+.|.+||+
T Consensus 251 ~~~~~~i~~agH~-~~~e~-----p~~~~~~i~~fl~ 281 (282)
T TIGR03343 251 DAQLHVFSRCGHW-AQWEH-----ADAFNRLVIDFLR 281 (282)
T ss_pred CCEEEEeCCCCcC-CcccC-----HHHHHHHHHHHhh
Confidence 6899999999998 44443 4889999999986
No 35
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=99.62 E-value=1.1e-14 Score=136.89 Aligned_cols=203 Identities=15% Similarity=0.113 Sum_probs=114.5
Q ss_pred CCcEEEEEcCCCccCCcccchhHHHHHHHhCCcEEEEEecCCCCCCChhHHHHHHHHHHHHHHHhhhhcCCCCCcEEEEE
Q 012898 202 PKPVVAFITGGAWIIGYKAWGSLLGQQLSERDIIVACIDYRNFPQGTIKDMVKDASQGISFVCNNISEYGGDPDRIYLMG 281 (454)
Q Consensus 202 ~~Pvvv~~HGgg~~~g~~~~~~~~~~~la~~G~~Vv~~dyr~~~~~~~~~~~~D~~~al~~l~~~~~~~g~d~~rI~l~G 281 (454)
+.|+||++||.| ++...+..+.+.|. .||.|+++|+++++.+..+....+.....+.+.+.+..+ +.+++.++|
T Consensus 12 ~~~~li~~hg~~---~~~~~~~~~~~~l~-~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~i~~~--~~~~v~liG 85 (251)
T TIGR02427 12 GAPVLVFINSLG---TDLRMWDPVLPALT-PDFRVLRYDKRGHGLSDAPEGPYSIEDLADDVLALLDHL--GIERAVFCG 85 (251)
T ss_pred CCCeEEEEcCcc---cchhhHHHHHHHhh-cccEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh--CCCceEEEE
Confidence 568999999954 33445556666665 589999999999987643321112222222223333332 345899999
Q ss_pred cCchHHHHHHHHHHHHHhhhCCCCCc--c-c-chhhhhh----------------hc-c-ccCCCC-CChh---hhh---
Q 012898 282 QSAGAHIAACTLLEQAIKETGEGEST--T-W-SVSQIRA----------------YF-G-LSGGIM-DGEE---SLR--- 332 (454)
Q Consensus 282 ~S~GG~la~~~a~~~~~~~~~~~~~~--~-~-~~~~i~~----------------~~-~-~~g~~~-~~~~---~~~--- 332 (454)
||+||.+++.++.+.+.......... . . ....... .. . ...... .... .+.
T Consensus 86 ~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (251)
T TIGR02427 86 LSLGGLIAQGLAARRPDRVRALVLSNTAAKIGTPESWNARIAAVRAEGLAALADAVLERWFTPGFREAHPARLDLYRNML 165 (251)
T ss_pred eCchHHHHHHHHHHCHHHhHHHhhccCccccCchhhHHHHHhhhhhccHHHHHHHHHHHHcccccccCChHHHHHHHHHH
Confidence 99999999998887644432211100 0 0 0000000 00 0 000000 0000 000
Q ss_pred -cCCccc-------ccCCCccccccCCCCCEEEEEeCCCCCCChHHHHHHHHHHHHcCCCEEEEEeCCCCccccccCCCC
Q 012898 333 -QYSPEV-------LVQDPNTRHAVSLLPPIILFHGTADYSIPADASKNFANTLQRVGVRAESILYEGKTHTDLFLQDPM 404 (454)
Q Consensus 333 -~~~p~~-------~~~~~~~~~~~~~~pPvLiihGe~D~~Vp~~~s~~l~~~l~~~g~~vel~~~~g~~H~~~~l~~p~ 404 (454)
...... ...........+...|+++++|++|..+|.+..+.+.+.++ +.+++++++++|. .++..
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvlii~g~~D~~~~~~~~~~~~~~~~----~~~~~~~~~~gH~-~~~~~-- 238 (251)
T TIGR02427 166 VRQPPDGYAGCCAAIRDADFRDRLGAIAVPTLCIAGDQDGSTPPELVREIADLVP----GARFAEIRGAGHI-PCVEQ-- 238 (251)
T ss_pred HhcCHHHHHHHHHHHhcccHHHHhhhcCCCeEEEEeccCCcCChHHHHHHHHhCC----CceEEEECCCCCc-ccccC--
Confidence 000000 00000011223345799999999999999998888877764 4688999999997 44443
Q ss_pred CCcHHHHHHHHHHHHH
Q 012898 405 RGGKDDMFEDIVAIIH 420 (454)
Q Consensus 405 ~~~~~~~~~~i~~Fl~ 420 (454)
.+++.+.+.+|++
T Consensus 239 ---p~~~~~~i~~fl~ 251 (251)
T TIGR02427 239 ---PEAFNAALRDFLR 251 (251)
T ss_pred ---hHHHHHHHHHHhC
Confidence 4788888888874
No 36
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=99.61 E-value=1.9e-14 Score=136.64 Aligned_cols=204 Identities=14% Similarity=0.142 Sum_probs=115.8
Q ss_pred CCCcEEEEEcCCCccCCcccchhHHHHHHHhCCcEEEEEecCCCCCCChhH-HHHHHHHHHHHHHHhhhhcCCCCCcEEE
Q 012898 201 GPKPVVAFITGGAWIIGYKAWGSLLGQQLSERDIIVACIDYRNFPQGTIKD-MVKDASQGISFVCNNISEYGGDPDRIYL 279 (454)
Q Consensus 201 ~~~Pvvv~~HGgg~~~g~~~~~~~~~~~la~~G~~Vv~~dyr~~~~~~~~~-~~~D~~~al~~l~~~~~~~g~d~~rI~l 279 (454)
.+.|+||++||.+ ++...+......|. .+|.|+++|+||+|.+..+. ...+.....+.+.+.+... +..++++
T Consensus 11 ~~~~~iv~lhG~~---~~~~~~~~~~~~l~-~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~i~~~--~~~~~~l 84 (257)
T TIGR03611 11 ADAPVVVLSSGLG---GSGSYWAPQLDVLT-QRFHVVTYDHRGTGRSPGELPPGYSIAHMADDVLQLLDAL--NIERFHF 84 (257)
T ss_pred CCCCEEEEEcCCC---cchhHHHHHHHHHH-hccEEEEEcCCCCCCCCCCCcccCCHHHHHHHHHHHHHHh--CCCcEEE
Confidence 3568999999954 44445555556665 47999999999988764321 1011222222233333332 3458999
Q ss_pred EEcCchHHHHHHHHHHHHHhhhCCCCCcccchh---h---hhh---hccccCC---------CCCChhhh----------
Q 012898 280 MGQSAGAHIAACTLLEQAIKETGEGESTTWSVS---Q---IRA---YFGLSGG---------IMDGEESL---------- 331 (454)
Q Consensus 280 ~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~---~---i~~---~~~~~g~---------~~~~~~~~---------- 331 (454)
+|||+||.++..++.+.+...........+... . ... .+...+. .......+
T Consensus 85 ~G~S~Gg~~a~~~a~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (257)
T TIGR03611 85 VGHALGGLIGLQLALRYPERLLSLVLINAWSRPDPHTRRCFDVRIALLQHAGPEAYVHAQALFLYPADWISENAARLAAD 164 (257)
T ss_pred EEechhHHHHHHHHHHChHHhHHheeecCCCCCChhHHHHHHHHHHHHhccCcchhhhhhhhhhccccHhhccchhhhhh
Confidence 999999999999988765432222111100000 0 000 0000000 00000000
Q ss_pred -----hcCCcc-c-------ccCCCccccccCCCCCEEEEEeCCCCCCChHHHHHHHHHHHHcCCCEEEEEeCCCCcccc
Q 012898 332 -----RQYSPE-V-------LVQDPNTRHAVSLLPPIILFHGTADYSIPADASKNFANTLQRVGVRAESILYEGKTHTDL 398 (454)
Q Consensus 332 -----~~~~p~-~-------~~~~~~~~~~~~~~pPvLiihGe~D~~Vp~~~s~~l~~~l~~~g~~vel~~~~g~~H~~~ 398 (454)
..+... . ...............|+++++|++|.++|.+.++++++.+. +.+++.++++||. .
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~----~~~~~~~~~~gH~-~ 239 (257)
T TIGR03611 165 EAHALAHFPGKANVLRRINALEAFDVSARLDRIQHPVLLIANRDDMLVPYTQSLRLAAALP----NAQLKLLPYGGHA-S 239 (257)
T ss_pred hhhcccccCccHHHHHHHHHHHcCCcHHHhcccCccEEEEecCcCcccCHHHHHHHHHhcC----CceEEEECCCCCC-c
Confidence 000000 0 00000111233456799999999999999999999888765 5688899999998 4
Q ss_pred ccCCCCCCcHHHHHHHHHHHHH
Q 012898 399 FLQDPMRGGKDDMFEDIVAIIH 420 (454)
Q Consensus 399 ~l~~p~~~~~~~~~~~i~~Fl~ 420 (454)
.+. ..+++.+.+.+||+
T Consensus 240 ~~~-----~~~~~~~~i~~fl~ 256 (257)
T TIGR03611 240 NVT-----DPETFNRALLDFLK 256 (257)
T ss_pred ccc-----CHHHHHHHHHHHhc
Confidence 433 44889999999986
No 37
>PLN00021 chlorophyllase
Probab=99.61 E-value=3.9e-14 Score=140.77 Aligned_cols=194 Identities=22% Similarity=0.284 Sum_probs=125.7
Q ss_pred CCeeEEEEeeCCCCCCCcEEEEEcCCCccCCcccchhHHHHHHHhCCcEEEEEecCCCCCCChhHHHHHHHHHHHHHHHh
Q 012898 187 PRNRLDLYFPKSSDGPKPVVAFITGGAWIIGYKAWGSLLGQQLSERDIIVACIDYRNFPQGTIKDMVKDASQGISFVCNN 266 (454)
Q Consensus 187 ~~~~l~vy~P~~~~~~~Pvvv~~HGgg~~~g~~~~~~~~~~~la~~G~~Vv~~dyr~~~~~~~~~~~~D~~~al~~l~~~ 266 (454)
....+.+|+|.. .++.|+|||+||+++ ...++..+.+.|+++||+|+++|+++.........++|..++++|+.+.
T Consensus 37 ~~~p~~v~~P~~-~g~~PvVv~lHG~~~---~~~~y~~l~~~Las~G~~VvapD~~g~~~~~~~~~i~d~~~~~~~l~~~ 112 (313)
T PLN00021 37 PPKPLLVATPSE-AGTYPVLLFLHGYLL---YNSFYSQLLQHIASHGFIVVAPQLYTLAGPDGTDEIKDAAAVINWLSSG 112 (313)
T ss_pred CCceEEEEeCCC-CCCCCEEEEECCCCC---CcccHHHHHHHHHhCCCEEEEecCCCcCCCCchhhHHHHHHHHHHHHhh
Confidence 346789999975 467899999999764 3456777889999999999999987653333345567888889999876
Q ss_pred hhh-----cCCCCCcEEEEEcCchHHHHHHHHHHHHHhhhCCCCCcccchhhhhhhccccCCCCCChhhhhcCCcccccC
Q 012898 267 ISE-----YGGDPDRIYLMGQSAGAHIAACTLLEQAIKETGEGESTTWSVSQIRAYFGLSGGIMDGEESLRQYSPEVLVQ 341 (454)
Q Consensus 267 ~~~-----~g~d~~rI~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~~~~~p~~~~~ 341 (454)
+.. ...|.++++|+|||+||.+++.++........ ...+.+.+.+... ... ..-....+....
T Consensus 113 l~~~l~~~~~~d~~~v~l~GHS~GG~iA~~lA~~~~~~~~---------~~~v~ali~ldPv-~g~-~~~~~~~p~il~- 180 (313)
T PLN00021 113 LAAVLPEGVRPDLSKLALAGHSRGGKTAFALALGKAAVSL---------PLKFSALIGLDPV-DGT-SKGKQTPPPVLT- 180 (313)
T ss_pred hhhhcccccccChhheEEEEECcchHHHHHHHhhcccccc---------ccceeeEEeeccc-ccc-ccccCCCCcccc-
Confidence 543 23677899999999999999999987542210 1123333333221 000 000001111000
Q ss_pred CCccccccCCCCCEEEEEeCCCC-----CCC----hH-HHHHHHHHHHHcCCCEEEEEeCCCCccccccC
Q 012898 342 DPNTRHAVSLLPPIILFHGTADY-----SIP----AD-ASKNFANTLQRVGVRAESILYEGKTHTDLFLQ 401 (454)
Q Consensus 342 ~~~~~~~~~~~pPvLiihGe~D~-----~Vp----~~-~s~~l~~~l~~~g~~vel~~~~g~~H~~~~l~ 401 (454)
..........|+|++++..|. .+| .. +-.+|++.++. ++.+.+.++++|.++...
T Consensus 181 --~~~~s~~~~~P~liig~g~~~~~~~~~~p~~ap~~~~~~~f~~~~~~---~~~~~~~~~~gH~~~~~~ 245 (313)
T PLN00021 181 --YAPHSFNLDIPVLVIGTGLGGEPRNPLFPPCAPDGVNHAEFFNECKA---PAVHFVAKDYGHMDMLDD 245 (313)
T ss_pred --cCcccccCCCCeEEEecCCCcccccccccccCCCCCCHHHHHHhcCC---CeeeeeecCCCcceeecC
Confidence 001122345699999999763 222 33 34778876653 789999999999977433
No 38
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=99.60 E-value=1.4e-15 Score=162.76 Aligned_cols=151 Identities=27% Similarity=0.399 Sum_probs=111.1
Q ss_pred hhhhhhhcCChh-----------------HHHHHHHHhHhhhhcCCCccccccccccccceeeceeccCCCCeeEEEEee
Q 012898 134 FKLLRYLGVGYR-----------------WIVRFLALGCYSLLLLPGFIQVGCHYFFSSQVRRGIVYGDQPRNRLDLYFP 196 (454)
Q Consensus 134 ~~~~~~lg~~~~-----------------w~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~v~y~~~~~~~l~vy~P 196 (454)
..+..|+||+|+ |...+ -+..+.+.|.|........ ....+++|++++||.|
T Consensus 36 ~~~~~F~gIpya~PP~G~lRF~~P~p~~~W~gv~-----~at~~~~~C~q~~~~~~~~------~~~~sEDCLylNV~tp 104 (545)
T KOG1516|consen 36 VDVDRFLGIPYAKPPVGELRFRKPQPPEPWTGVL-----DATKYGPACPQNDELTGQN------RVFGSEDCLYLNVYTP 104 (545)
T ss_pred ceeEEEcccccCCCCCccccCCCCCCCCCCcccc-----ccccCCCCCCCcccccccc------CCCCcCCCceEEEecc
Confidence 346778888887 32222 2356667776653221110 3446788999999999
Q ss_pred CCCCCC-CcEEEEEcCCCccCCcccch-hHH-HHHHHhCCcEEEEEecCCCCCCC---------hhHHHHHHHHHHHHHH
Q 012898 197 KSSDGP-KPVVAFITGGAWIIGYKAWG-SLL-GQQLSERDIIVACIDYRNFPQGT---------IKDMVKDASQGISFVC 264 (454)
Q Consensus 197 ~~~~~~-~Pvvv~~HGgg~~~g~~~~~-~~~-~~~la~~G~~Vv~~dyr~~~~~~---------~~~~~~D~~~al~~l~ 264 (454)
+....+ .||+||+|||++..|+...+ ... ...+..++++||+++||++..+. ...++.|+..|++|++
T Consensus 105 ~~~~~~~~pV~V~iHGG~~~~gs~~~~~~~~~~~~~~~~~VVvVt~~YRLG~lGF~st~d~~~~gN~gl~Dq~~AL~wv~ 184 (545)
T KOG1516|consen 105 QGCSESKLPVMVYIHGGGFQFGSASSFEIISPAYVLLLKDVVVVTINYRLGPLGFLSTGDSAAPGNLGLFDQLLALRWVK 184 (545)
T ss_pred CCCccCCCCEEEEEeCCceeeccccchhhcCchhccccCCEEEEEecccceeceeeecCCCCCCCcccHHHHHHHHHHHH
Confidence 875432 89999999999988875433 222 23444558999999999875443 3346889999999999
Q ss_pred HhhhhcCCCCCcEEEEEcCchHHHHHHHHHH
Q 012898 265 NNISEYGGDPDRIYLMGQSAGAHIAACTLLE 295 (454)
Q Consensus 265 ~~~~~~g~d~~rI~l~G~S~GG~la~~~a~~ 295 (454)
++|..||+||++|+|+|||+||..+..+...
T Consensus 185 ~~I~~FGGdp~~vTl~G~saGa~~v~~l~~S 215 (545)
T KOG1516|consen 185 DNIPSFGGDPKNVTLFGHSAGAASVSLLTLS 215 (545)
T ss_pred HHHHhcCCCCCeEEEEeechhHHHHHHHhcC
Confidence 9999999999999999999999999877654
No 39
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=99.59 E-value=3e-14 Score=140.84 Aligned_cols=226 Identities=22% Similarity=0.305 Sum_probs=132.6
Q ss_pred CCeeEEEEeeCCCCCCCcEEEEEcCCCccCCcccchhHHHHHHHhCCcEEEEEecCCCCCCC-h----hHHHHHHHHHHH
Q 012898 187 PRNRLDLYFPKSSDGPKPVVAFITGGAWIIGYKAWGSLLGQQLSERDIIVACIDYRNFPQGT-I----KDMVKDASQGIS 261 (454)
Q Consensus 187 ~~~~l~vy~P~~~~~~~Pvvv~~HGgg~~~g~~~~~~~~~~~la~~G~~Vv~~dyr~~~~~~-~----~~~~~D~~~al~ 261 (454)
..+.+..|.+.. .+..+||++||.+. +...|..++..|+.+||.|+++|.||+|.+. . .....|....++
T Consensus 20 ~~~~~~~~~~~~--~~~g~Vvl~HG~~E---h~~ry~~la~~l~~~G~~V~~~D~RGhG~S~r~~rg~~~~f~~~~~dl~ 94 (298)
T COG2267 20 TRLRYRTWAAPE--PPKGVVVLVHGLGE---HSGRYEELADDLAARGFDVYALDLRGHGRSPRGQRGHVDSFADYVDDLD 94 (298)
T ss_pred ceEEEEeecCCC--CCCcEEEEecCchH---HHHHHHHHHHHHHhCCCEEEEecCCCCCCCCCCCcCCchhHHHHHHHHH
Confidence 334556666554 23379999999653 4456677999999999999999999998875 1 112333333333
Q ss_pred HHHHhhhhcCCCCCcEEEEEcCchHHHHHHHHHHHHHhhhCCCCC-cccchh------h-----------hhhhccccC-
Q 012898 262 FVCNNISEYGGDPDRIYLMGQSAGAHIAACTLLEQAIKETGEGES-TTWSVS------Q-----------IRAYFGLSG- 322 (454)
Q Consensus 262 ~l~~~~~~~g~d~~rI~l~G~S~GG~la~~~a~~~~~~~~~~~~~-~~~~~~------~-----------i~~~~~~~g- 322 (454)
.+.+.+... ....+++|+||||||.+++.++.+......+.... ...... . +...+....
T Consensus 95 ~~~~~~~~~-~~~~p~~l~gHSmGg~Ia~~~~~~~~~~i~~~vLssP~~~l~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 173 (298)
T COG2267 95 AFVETIAEP-DPGLPVFLLGHSMGGLIALLYLARYPPRIDGLVLSSPALGLGGAILRLILARLALKLLGRIRPKLPVDSN 173 (298)
T ss_pred HHHHHHhcc-CCCCCeEEEEeCcHHHHHHHHHHhCCccccEEEEECccccCChhHHHHHHHHHhcccccccccccccCcc
Confidence 333333221 12358999999999999999998876332221100 000000 0 000011110
Q ss_pred ---CCCC-----ChhhhhcC--Cccccc---------------CCCccccccCCCCCEEEEEeCCCCCCC-hHHHHHHHH
Q 012898 323 ---GIMD-----GEESLRQY--SPEVLV---------------QDPNTRHAVSLLPPIILFHGTADYSIP-ADASKNFAN 376 (454)
Q Consensus 323 ---~~~~-----~~~~~~~~--~p~~~~---------------~~~~~~~~~~~~pPvLiihGe~D~~Vp-~~~s~~l~~ 376 (454)
.... .......+ +|.... .............|+||+||++|.+|+ .+...++++
T Consensus 174 ~~~~~~~~~~sr~~~~~~~~~~dP~~~~~~~~~~w~~~~~~a~~~~~~~~~~~~~~PvLll~g~~D~vv~~~~~~~~~~~ 253 (298)
T COG2267 174 LLEGVLTDDLSRDPAEVAAYEADPLIGVGGPVSRWVDLALLAGRVPALRDAPAIALPVLLLQGGDDRVVDNVEGLARFFE 253 (298)
T ss_pred cccCcCcchhhcCHHHHHHHhcCCccccCCccHHHHHHHHHhhcccchhccccccCCEEEEecCCCccccCcHHHHHHHH
Confidence 0000 00111111 110000 001112233445699999999999999 688888877
Q ss_pred HHHHcCCCEEEEEeCCCCccccccCCCCCCcHHHHHHHHHHHHHhcC
Q 012898 377 TLQRVGVRAESILYEGKTHTDLFLQDPMRGGKDDMFEDIVAIIHADD 423 (454)
Q Consensus 377 ~l~~~g~~vel~~~~g~~H~~~~l~~p~~~~~~~~~~~i~~Fl~~~~ 423 (454)
++... ++++++|+|+.|. ++ .++.. ..+++++++.+|+.++.
T Consensus 254 ~~~~~--~~~~~~~~g~~He-~~-~E~~~-~r~~~~~~~~~~l~~~~ 295 (298)
T COG2267 254 RAGSP--DKELKVIPGAYHE-LL-NEPDR-AREEVLKDILAWLAEAL 295 (298)
T ss_pred hcCCC--CceEEecCCcchh-hh-cCcch-HHHHHHHHHHHHHHhhc
Confidence 76542 3799999999998 33 22311 22899999999999875
No 40
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=99.59 E-value=2.8e-14 Score=139.16 Aligned_cols=208 Identities=13% Similarity=0.075 Sum_probs=121.2
Q ss_pred CcEEEEEcCCCccCCcccchhHHHHHHHhCCcEEEEEecCCCCCCChhHHHHHHHHHHHHHHHhhhhcCCCCCcEEEEEc
Q 012898 203 KPVVAFITGGAWIIGYKAWGSLLGQQLSERDIIVACIDYRNFPQGTIKDMVKDASQGISFVCNNISEYGGDPDRIYLMGQ 282 (454)
Q Consensus 203 ~Pvvv~~HGgg~~~g~~~~~~~~~~~la~~G~~Vv~~dyr~~~~~~~~~~~~D~~~al~~l~~~~~~~g~d~~rI~l~G~ 282 (454)
.+.|||+||.+ ++...+..+.+.|.+ +|.|+++|+||+|.+..+....+.....+.+.+.++..+ .+++.|+||
T Consensus 25 ~~plvllHG~~---~~~~~w~~~~~~L~~-~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~i~~l~--~~~~~LvG~ 98 (276)
T TIGR02240 25 LTPLLIFNGIG---ANLELVFPFIEALDP-DLEVIAFDVPGVGGSSTPRHPYRFPGLAKLAARMLDYLD--YGQVNAIGV 98 (276)
T ss_pred CCcEEEEeCCC---cchHHHHHHHHHhcc-CceEEEECCCCCCCCCCCCCcCcHHHHHHHHHHHHHHhC--cCceEEEEE
Confidence 46799999943 444455667777765 699999999999987643211112222233333333333 357999999
Q ss_pred CchHHHHHHHHHHHHHhhhCCCCCcccc-----h---hh------hhhhccc----------cCCCC-CChhhhhc----
Q 012898 283 SAGAHIAACTLLEQAIKETGEGESTTWS-----V---SQ------IRAYFGL----------SGGIM-DGEESLRQ---- 333 (454)
Q Consensus 283 S~GG~la~~~a~~~~~~~~~~~~~~~~~-----~---~~------i~~~~~~----------~g~~~-~~~~~~~~---- 333 (454)
|+||.+++.++.+++............. . .. ....+.. .+... ........
T Consensus 99 S~GG~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (276)
T TIGR02240 99 SWGGALAQQFAHDYPERCKKLILAATAAGAVMVPGKPKVLMMMASPRRYIQPSHGIHIAPDIYGGAFRRDPELAMAHASK 178 (276)
T ss_pred CHHHHHHHHHHHHCHHHhhheEEeccCCccccCCCchhHHHHhcCchhhhccccccchhhhhccceeeccchhhhhhhhh
Confidence 9999999999998766543321110000 0 00 0000000 00000 00000000
Q ss_pred CCccc---c-------cCCCccccccCCCCCEEEEEeCCCCCCChHHHHHHHHHHHHcCCCEEEEEeCCCCccccccCCC
Q 012898 334 YSPEV---L-------VQDPNTRHAVSLLPPIILFHGTADYSIPADASKNFANTLQRVGVRAESILYEGKTHTDLFLQDP 403 (454)
Q Consensus 334 ~~p~~---~-------~~~~~~~~~~~~~pPvLiihGe~D~~Vp~~~s~~l~~~l~~~g~~vel~~~~g~~H~~~~l~~p 403 (454)
..... . ..........+...|+|+++|++|.++|.+.++++.+.+. +.+++++++ ||. .+...
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~v~~~~~~~l~~~~~----~~~~~~i~~-gH~-~~~e~- 251 (276)
T TIGR02240 179 VRSGGKLGYYWQLFAGLGWTSIHWLHKIQQPTLVLAGDDDPIIPLINMRLLAWRIP----NAELHIIDD-GHL-FLITR- 251 (276)
T ss_pred cccCCCchHHHHHHHHcCCchhhHhhcCCCCEEEEEeCCCCcCCHHHHHHHHHhCC----CCEEEEEcC-CCc-hhhcc-
Confidence 00000 0 0000011223456799999999999999999999988775 467788886 997 44444
Q ss_pred CCCcHHHHHHHHHHHHHhcChhhh
Q 012898 404 MRGGKDDMFEDIVAIIHADDQEAR 427 (454)
Q Consensus 404 ~~~~~~~~~~~i~~Fl~~~~~~~~ 427 (454)
.+++.+.+.+|+++..+.+.
T Consensus 252 ----p~~~~~~i~~fl~~~~~~~~ 271 (276)
T TIGR02240 252 ----AEAVAPIIMKFLAEERQRAV 271 (276)
T ss_pred ----HHHHHHHHHHHHHHhhhhcc
Confidence 48999999999998776543
No 41
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=99.58 E-value=3.6e-14 Score=137.23 Aligned_cols=211 Identities=18% Similarity=0.196 Sum_probs=119.8
Q ss_pred EEEEeeCCCCCCCcEEEEEcCCCccCCcccchhHHHHHHHhCCcEEEEEecCCCCCCChhH----HHHHHHHHHHHHHHh
Q 012898 191 LDLYFPKSSDGPKPVVAFITGGAWIIGYKAWGSLLGQQLSERDIIVACIDYRNFPQGTIKD----MVKDASQGISFVCNN 266 (454)
Q Consensus 191 l~vy~P~~~~~~~Pvvv~~HGgg~~~g~~~~~~~~~~~la~~G~~Vv~~dyr~~~~~~~~~----~~~D~~~al~~l~~~ 266 (454)
+++++......+.|+|||+||.+ ++...+..+...|++ +|.|+++|+|++|.+..+. .+.+..+.+..+.
T Consensus 16 ~~~~~~~~g~~~~~~vv~~hG~~---~~~~~~~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i-- 89 (278)
T TIGR03056 16 FHWHVQDMGPTAGPLLLLLHGTG---ASTHSWRDLMPPLAR-SFRVVAPDLPGHGFTRAPFRFRFTLPSMAEDLSALC-- 89 (278)
T ss_pred EEEEEEecCCCCCCeEEEEcCCC---CCHHHHHHHHHHHhh-CcEEEeecCCCCCCCCCccccCCCHHHHHHHHHHHH--
Confidence 34444433333458999999953 445556667777765 6999999999998765322 2333333333333
Q ss_pred hhhcCCCCCcEEEEEcCchHHHHHHHHHHHHHhhhCCCCC--cc--c------chhhhhhhcc---cc------------
Q 012898 267 ISEYGGDPDRIYLMGQSAGAHIAACTLLEQAIKETGEGES--TT--W------SVSQIRAYFG---LS------------ 321 (454)
Q Consensus 267 ~~~~g~d~~rI~l~G~S~GG~la~~~a~~~~~~~~~~~~~--~~--~------~~~~i~~~~~---~~------------ 321 (454)
..+++ ++++|+|||+||.+++.++...+.+....... .. . ....+..... ..
T Consensus 90 -~~~~~--~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (278)
T TIGR03056 90 -AAEGL--SPDGVIGHSAGAAIALRLALDGPVTPRMVVGINAALMPFEGMAGTLFPYMARVLACNPFTPPMMSRGAADQQ 166 (278)
T ss_pred -HHcCC--CCceEEEECccHHHHHHHHHhCCcccceEEEEcCcccccccccccccchhhHhhhhcccchHHHHhhcccCc
Confidence 33333 57899999999999999988765432211000 00 0 0000000000 00
Q ss_pred ---------CCCCCC--hhhhhc-C-Cccc----------ccCCCccccccCCCCCEEEEEeCCCCCCChHHHHHHHHHH
Q 012898 322 ---------GGIMDG--EESLRQ-Y-SPEV----------LVQDPNTRHAVSLLPPIILFHGTADYSIPADASKNFANTL 378 (454)
Q Consensus 322 ---------g~~~~~--~~~~~~-~-~p~~----------~~~~~~~~~~~~~~pPvLiihGe~D~~Vp~~~s~~l~~~l 378 (454)
+..... ...+.. . .... ...........+...|+++++|++|..+|.+..+.+.+.+
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~g~~D~~vp~~~~~~~~~~~ 246 (278)
T TIGR03056 167 RVERLIRDTGSLLDKAGMTYYGRLIRSPAHVDGALSMMAQWDLAPLNRDLPRITIPLHLIAGEEDKAVPPDESKRAATRV 246 (278)
T ss_pred chhHHhhccccccccchhhHHHHhhcCchhhhHHHHHhhcccccchhhhcccCCCCEEEEEeCCCcccCHHHHHHHHHhc
Confidence 000000 000000 0 0000 0000000112234569999999999999999888887776
Q ss_pred HHcCCCEEEEEeCCCCccccccCCCCCCcHHHHHHHHHHHHH
Q 012898 379 QRVGVRAESILYEGKTHTDLFLQDPMRGGKDDMFEDIVAIIH 420 (454)
Q Consensus 379 ~~~g~~vel~~~~g~~H~~~~l~~p~~~~~~~~~~~i~~Fl~ 420 (454)
. ++++.+++++||. ++.++ .+++.+.|.+|++
T Consensus 247 ~----~~~~~~~~~~gH~-~~~e~-----p~~~~~~i~~f~~ 278 (278)
T TIGR03056 247 P----TATLHVVPGGGHL-VHEEQ-----ADGVVGLILQAAE 278 (278)
T ss_pred c----CCeEEEECCCCCc-ccccC-----HHHHHHHHHHHhC
Confidence 5 5789999999997 44443 4889999999974
No 42
>PRK10673 acyl-CoA esterase; Provisional
Probab=99.58 E-value=2.7e-14 Score=136.79 Aligned_cols=206 Identities=12% Similarity=0.136 Sum_probs=118.0
Q ss_pred CCCCcEEEEEcCCCccCCcccchhHHHHHHHhCCcEEEEEecCCCCCCChhHHHHHHHHHHHHHHHhhhhcCCCCCcEEE
Q 012898 200 DGPKPVVAFITGGAWIIGYKAWGSLLGQQLSERDIIVACIDYRNFPQGTIKDMVKDASQGISFVCNNISEYGGDPDRIYL 279 (454)
Q Consensus 200 ~~~~Pvvv~~HGgg~~~g~~~~~~~~~~~la~~G~~Vv~~dyr~~~~~~~~~~~~D~~~al~~l~~~~~~~g~d~~rI~l 279 (454)
..+.|+|||+||.+ ++...+..+...|++ +|.|+++|.|++|.+..+.. .+.....+.+.+.+..++. +++.|
T Consensus 13 ~~~~~~iv~lhG~~---~~~~~~~~~~~~l~~-~~~vi~~D~~G~G~s~~~~~-~~~~~~~~d~~~~l~~l~~--~~~~l 85 (255)
T PRK10673 13 PHNNSPIVLVHGLF---GSLDNLGVLARDLVN-DHDIIQVDMRNHGLSPRDPV-MNYPAMAQDLLDTLDALQI--EKATF 85 (255)
T ss_pred CCCCCCEEEECCCC---CchhHHHHHHHHHhh-CCeEEEECCCCCCCCCCCCC-CCHHHHHHHHHHHHHHcCC--CceEE
Confidence 44568999999953 445556667777754 69999999999886653221 1122222233333333333 47999
Q ss_pred EEcCchHHHHHHHHHHHHHhhhCCCC----Ccccchh---h-hhhhcc--ccCC------------CCCChh---hhh-c
Q 012898 280 MGQSAGAHIAACTLLEQAIKETGEGE----STTWSVS---Q-IRAYFG--LSGG------------IMDGEE---SLR-Q 333 (454)
Q Consensus 280 ~G~S~GG~la~~~a~~~~~~~~~~~~----~~~~~~~---~-i~~~~~--~~g~------------~~~~~~---~~~-~ 333 (454)
+|||+||.+++.++.+.+........ ...+... . +..... ..+. ...... ... .
T Consensus 86 vGhS~Gg~va~~~a~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (255)
T PRK10673 86 IGHSMGGKAVMALTALAPDRIDKLVAIDIAPVDYHVRRHDEIFAAINAVSEAGATTRQQAAAIMRQHLNEEGVIQFLLKS 165 (255)
T ss_pred EEECHHHHHHHHHHHhCHhhcceEEEEecCCCCccchhhHHHHHHHHHhhhcccccHHHHHHHHHHhcCCHHHHHHHHhc
Confidence 99999999999999876654322111 0000000 0 000000 0000 000000 000 0
Q ss_pred CCc-cc----------ccCCCccccccCCCCCEEEEEeCCCCCCChHHHHHHHHHHHHcCCCEEEEEeCCCCccccccCC
Q 012898 334 YSP-EV----------LVQDPNTRHAVSLLPPIILFHGTADYSIPADASKNFANTLQRVGVRAESILYEGKTHTDLFLQD 402 (454)
Q Consensus 334 ~~p-~~----------~~~~~~~~~~~~~~pPvLiihGe~D~~Vp~~~s~~l~~~l~~~g~~vel~~~~g~~H~~~~l~~ 402 (454)
+.. .. ...............|+|+++|++|..++.+..+.+.+.+. ++++.++++++|. ..+.+
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~----~~~~~~~~~~gH~-~~~~~ 240 (255)
T PRK10673 166 FVDGEWRFNVPVLWDQYPHIVGWEKIPAWPHPALFIRGGNSPYVTEAYRDDLLAQFP----QARAHVIAGAGHW-VHAEK 240 (255)
T ss_pred CCcceeEeeHHHHHHhHHHHhCCcccCCCCCCeEEEECCCCCCCCHHHHHHHHHhCC----CcEEEEeCCCCCe-eeccC
Confidence 000 00 00000001122335699999999999999887777777654 6889999999997 54444
Q ss_pred CCCCcHHHHHHHHHHHHHhc
Q 012898 403 PMRGGKDDMFEDIVAIIHAD 422 (454)
Q Consensus 403 p~~~~~~~~~~~i~~Fl~~~ 422 (454)
| +++.+.+.+||.++
T Consensus 241 p-----~~~~~~l~~fl~~~ 255 (255)
T PRK10673 241 P-----DAVLRAIRRYLNDK 255 (255)
T ss_pred H-----HHHHHHHHHHHhcC
Confidence 4 78999999999863
No 43
>PRK10985 putative hydrolase; Provisional
Probab=99.57 E-value=8.2e-14 Score=139.55 Aligned_cols=232 Identities=13% Similarity=0.093 Sum_probs=127.1
Q ss_pred eceeccCCCCeeEEEEeeCCCCCCCcEEEEEcCCCccCCccc-chhHHHHHHHhCCcEEEEEecCCCCCCCh-------h
Q 012898 179 RGIVYGDQPRNRLDLYFPKSSDGPKPVVAFITGGAWIIGYKA-WGSLLGQQLSERDIIVACIDYRNFPQGTI-------K 250 (454)
Q Consensus 179 ~~v~y~~~~~~~l~vy~P~~~~~~~Pvvv~~HGgg~~~g~~~-~~~~~~~~la~~G~~Vv~~dyr~~~~~~~-------~ 250 (454)
+.+...+++.+.+.+........+.|+||++||.+. +... +...++..|+++||.|+++|||+++.... .
T Consensus 34 ~~~~~~dg~~~~l~w~~~~~~~~~~p~vll~HG~~g--~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~~~~~~~~~~~~ 111 (324)
T PRK10985 34 QRLELPDGDFVDLAWSEDPAQARHKPRLVLFHGLEG--SFNSPYAHGLLEAAQKRGWLGVVMHFRGCSGEPNRLHRIYHS 111 (324)
T ss_pred eEEECCCCCEEEEecCCCCccCCCCCEEEEeCCCCC--CCcCHHHHHHHHHHHHCCCEEEEEeCCCCCCCccCCcceECC
Confidence 334444433333443222222345799999999531 2222 34457889999999999999999865432 1
Q ss_pred HHHHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCchHHHHHHHHHHHHHhh-h-CC-CCCcccch----hh----------
Q 012898 251 DMVKDASQGISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLLEQAIKE-T-GE-GESTTWSV----SQ---------- 313 (454)
Q Consensus 251 ~~~~D~~~al~~l~~~~~~~g~d~~rI~l~G~S~GG~la~~~a~~~~~~~-~-~~-~~~~~~~~----~~---------- 313 (454)
....|+..+++++++.. ...+++++|||+||.+++.++.+..... . .. .....+.. ..
T Consensus 112 ~~~~D~~~~i~~l~~~~-----~~~~~~~vG~S~GG~i~~~~~~~~~~~~~~~~~v~i~~p~~~~~~~~~~~~~~~~~~~ 186 (324)
T PRK10985 112 GETEDARFFLRWLQREF-----GHVPTAAVGYSLGGNMLACLLAKEGDDLPLDAAVIVSAPLMLEACSYRMEQGFSRVYQ 186 (324)
T ss_pred CchHHHHHHHHHHHHhC-----CCCCEEEEEecchHHHHHHHHHhhCCCCCccEEEEEcCCCCHHHHHHHHhhhHHHHHH
Confidence 24688888999998752 2357999999999999888777653321 1 11 00000000 00
Q ss_pred ------hhhhc----c-ccCCCCCChhhhhcC------C-----c--------ccccCCCccccccCCCCCEEEEEeCCC
Q 012898 314 ------IRAYF----G-LSGGIMDGEESLRQY------S-----P--------EVLVQDPNTRHAVSLLPPIILFHGTAD 363 (454)
Q Consensus 314 ------i~~~~----~-~~g~~~~~~~~~~~~------~-----p--------~~~~~~~~~~~~~~~~pPvLiihGe~D 363 (454)
++..+ . ..+......+.+... . + ..+..............|+++++|++|
T Consensus 187 ~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~~~~~~g~~~~~~~y~~~~~~~~l~~i~~P~lii~g~~D 266 (324)
T PRK10985 187 RYLLNLLKANAARKLAAYPGTLPINLAQLKSVRRLREFDDLITARIHGFADAIDYYRQCSALPLLNQIRKPTLIIHAKDD 266 (324)
T ss_pred HHHHHHHHHHHHHHHHhccccccCCHHHHhcCCcHHHHhhhheeccCCCCCHHHHHHHCChHHHHhCCCCCEEEEecCCC
Confidence 00000 0 000000000011000 0 0 000011111233444569999999999
Q ss_pred CCCChHHHHHHHHHHHHcCCCEEEEEeCCCCccccccCCCCCCcHHHHHHHHHHHHHhc
Q 012898 364 YSIPADASKNFANTLQRVGVRAESILYEGKTHTDLFLQDPMRGGKDDMFEDIVAIIHAD 422 (454)
Q Consensus 364 ~~Vp~~~s~~l~~~l~~~g~~vel~~~~g~~H~~~~l~~p~~~~~~~~~~~i~~Fl~~~ 422 (454)
.+++.+....+.+. ..++++.+++++||..++ ..........+-+.+.+|++..
T Consensus 267 ~~~~~~~~~~~~~~----~~~~~~~~~~~~GH~~~~-~g~~~~~~~w~~~~~~~~~~~~ 320 (324)
T PRK10985 267 PFMTHEVIPKPESL----PPNVEYQLTEHGGHVGFV-GGTLLKPQMWLEQRIPDWLTTY 320 (324)
T ss_pred CCCChhhChHHHHh----CCCeEEEECCCCCceeeC-CCCCCCCCccHHHHHHHHHHHh
Confidence 99987766655432 236899999999998443 3221112235567777888643
No 44
>PLN02965 Probable pheophorbidase
Probab=99.56 E-value=5.2e-14 Score=135.76 Aligned_cols=203 Identities=15% Similarity=0.178 Sum_probs=120.4
Q ss_pred EEEEEcCCCccCCcccchhHHHHHHHhCCcEEEEEecCCCCCCChhHH-HHHHHHHHHHHHHhhhhcCCCCCcEEEEEcC
Q 012898 205 VVAFITGGAWIIGYKAWGSLLGQQLSERDIIVACIDYRNFPQGTIKDM-VKDASQGISFVCNNISEYGGDPDRIYLMGQS 283 (454)
Q Consensus 205 vvv~~HGgg~~~g~~~~~~~~~~~la~~G~~Vv~~dyr~~~~~~~~~~-~~D~~~al~~l~~~~~~~g~d~~rI~l~G~S 283 (454)
.|||+||.+ .+...|......|++.||.|+++|+||+|.+..+.. ..+.....+++.+.++..+.. +++.++|||
T Consensus 5 ~vvllHG~~---~~~~~w~~~~~~L~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~l~~l~~~-~~~~lvGhS 80 (255)
T PLN02965 5 HFVFVHGAS---HGAWCWYKLATLLDAAGFKSTCVDLTGAGISLTDSNTVSSSDQYNRPLFALLSDLPPD-HKVILVGHS 80 (255)
T ss_pred EEEEECCCC---CCcCcHHHHHHHHhhCCceEEEecCCcCCCCCCCccccCCHHHHHHHHHHHHHhcCCC-CCEEEEecC
Confidence 599999964 344456678888988899999999999997753211 112233334444444443322 489999999
Q ss_pred chHHHHHHHHHHHHHhhhCCCCCc-----cc--chhhhhh-------hccc---cCC--C----CCChhhhhc--CC---
Q 012898 284 AGAHIAACTLLEQAIKETGEGEST-----TW--SVSQIRA-------YFGL---SGG--I----MDGEESLRQ--YS--- 335 (454)
Q Consensus 284 ~GG~la~~~a~~~~~~~~~~~~~~-----~~--~~~~i~~-------~~~~---~g~--~----~~~~~~~~~--~~--- 335 (454)
|||.++..++.+++.......... .. ....... .... .+. . ......... +.
T Consensus 81 mGG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (255)
T PLN02965 81 IGGGSVTEALCKFTDKISMAIYVAAAMVKPGSIISPRLKNVMEGTEKIWDYTFGEGPDKPPTGIMMKPEFVRHYYYNQSP 160 (255)
T ss_pred cchHHHHHHHHhCchheeEEEEEccccCCCCCCccHHHHhhhhccccceeeeeccCCCCCcchhhcCHHHHHHHHhcCCC
Confidence 999999999988655432211000 00 0000000 0000 000 0 000000000 00
Q ss_pred ------------cccccC--CC-ccc-cccCCCCCEEEEEeCCCCCCChHHHHHHHHHHHHcCCCEEEEEeCCCCccccc
Q 012898 336 ------------PEVLVQ--DP-NTR-HAVSLLPPIILFHGTADYSIPADASKNFANTLQRVGVRAESILYEGKTHTDLF 399 (454)
Q Consensus 336 ------------p~~~~~--~~-~~~-~~~~~~pPvLiihGe~D~~Vp~~~s~~l~~~l~~~g~~vel~~~~g~~H~~~~ 399 (454)
+..... .. ... .......|+++++|++|..+|.+.++.+++.+. +.++++++++||. .+
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vP~lvi~g~~D~~~~~~~~~~~~~~~~----~a~~~~i~~~GH~-~~ 235 (255)
T PLN02965 161 LEDYTLSSKLLRPAPVRAFQDLDKLPPNPEAEKVPRVYIKTAKDNLFDPVRQDVMVENWP----PAQTYVLEDSDHS-AF 235 (255)
T ss_pred HHHHHHHHHhcCCCCCcchhhhhhccchhhcCCCCEEEEEcCCCCCCCHHHHHHHHHhCC----cceEEEecCCCCc-hh
Confidence 000000 00 000 112356799999999999999999999888776 4789999999997 55
Q ss_pred cCCCCCCcHHHHHHHHHHHHHh
Q 012898 400 LQDPMRGGKDDMFEDIVAIIHA 421 (454)
Q Consensus 400 l~~p~~~~~~~~~~~i~~Fl~~ 421 (454)
+..| +++.+.+.+|++.
T Consensus 236 ~e~p-----~~v~~~l~~~~~~ 252 (255)
T PLN02965 236 FSVP-----TTLFQYLLQAVSS 252 (255)
T ss_pred hcCH-----HHHHHHHHHHHHH
Confidence 5544 8899999999875
No 45
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=99.55 E-value=8.7e-14 Score=136.89 Aligned_cols=204 Identities=14% Similarity=0.117 Sum_probs=119.1
Q ss_pred CcEEEEEcCCCccCCcccchhHHHHHHHhCCcEEEEEecCCCCCCChhH-------HHHHHHHHHHHHHHhhhhcCCCCC
Q 012898 203 KPVVAFITGGAWIIGYKAWGSLLGQQLSERDIIVACIDYRNFPQGTIKD-------MVKDASQGISFVCNNISEYGGDPD 275 (454)
Q Consensus 203 ~Pvvv~~HGgg~~~g~~~~~~~~~~~la~~G~~Vv~~dyr~~~~~~~~~-------~~~D~~~al~~l~~~~~~~g~d~~ 275 (454)
.|.|||+||.+ ++...+..+...|++. +.|+++|.+|+|.+..+. ...+.....+.+.+.+...++ +
T Consensus 29 ~~~vlllHG~~---~~~~~w~~~~~~L~~~-~~vi~~DlpG~G~S~~~~~~~~~~~~~~~~~~~a~~l~~~l~~l~~--~ 102 (294)
T PLN02824 29 GPALVLVHGFG---GNADHWRKNTPVLAKS-HRVYAIDLLGYGYSDKPNPRSAPPNSFYTFETWGEQLNDFCSDVVG--D 102 (294)
T ss_pred CCeEEEECCCC---CChhHHHHHHHHHHhC-CeEEEEcCCCCCCCCCCccccccccccCCHHHHHHHHHHHHHHhcC--C
Confidence 37899999954 4455667778888876 699999999999876431 111222222233333333344 5
Q ss_pred cEEEEEcCchHHHHHHHHHHHHHhhhCCCCCcc----c--------chh---hhhhhccc--------------------
Q 012898 276 RIYLMGQSAGAHIAACTLLEQAIKETGEGESTT----W--------SVS---QIRAYFGL-------------------- 320 (454)
Q Consensus 276 rI~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~----~--------~~~---~i~~~~~~-------------------- 320 (454)
++.|+|||+||.+++.++.+++.+......... + ... .+...+..
T Consensus 103 ~~~lvGhS~Gg~va~~~a~~~p~~v~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (294)
T PLN02824 103 PAFVICNSVGGVVGLQAAVDAPELVRGVMLINISLRGLHIKKQPWLGRPFIKAFQNLLRETAVGKAFFKSVATPETVKNI 182 (294)
T ss_pred CeEEEEeCHHHHHHHHHHHhChhheeEEEEECCCcccccccccchhhhHHHHHHHHHHhchhHHHHHHHhhcCHHHHHHH
Confidence 899999999999999999987765332211000 0 000 00000000
Q ss_pred ----cCC-CCCChhhhhcC-----Ccc---c---cc--CC-Cc-cccccCCCCCEEEEEeCCCCCCChHHHHHHHHHHHH
Q 012898 321 ----SGG-IMDGEESLRQY-----SPE---V---LV--QD-PN-TRHAVSLLPPIILFHGTADYSIPADASKNFANTLQR 380 (454)
Q Consensus 321 ----~g~-~~~~~~~~~~~-----~p~---~---~~--~~-~~-~~~~~~~~pPvLiihGe~D~~Vp~~~s~~l~~~l~~ 380 (454)
.+. .....+....+ .+. . .. .. .. .....+...|+|+++|++|..+|.+.++.+.+...
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~~~~~~~- 261 (294)
T PLN02824 183 LCQCYHDDSAVTDELVEAILRPGLEPGAVDVFLDFISYSGGPLPEELLPAVKCPVLIAWGEKDPWEPVELGRAYANFDA- 261 (294)
T ss_pred HHHhccChhhccHHHHHHHHhccCCchHHHHHHHHhccccccchHHHHhhcCCCeEEEEecCCCCCChHHHHHHHhcCC-
Confidence 000 00000000000 000 0 00 00 00 01223456799999999999999988887655432
Q ss_pred cCCCEEEEEeCCCCccccccCCCCCCcHHHHHHHHHHHHHhc
Q 012898 381 VGVRAESILYEGKTHTDLFLQDPMRGGKDDMFEDIVAIIHAD 422 (454)
Q Consensus 381 ~g~~vel~~~~g~~H~~~~l~~p~~~~~~~~~~~i~~Fl~~~ 422 (454)
..++++++++||. .+++.| +++.+.+.+|++++
T Consensus 262 ---~~~~~~i~~~gH~-~~~e~p-----~~~~~~i~~fl~~~ 294 (294)
T PLN02824 262 ---VEDFIVLPGVGHC-PQDEAP-----ELVNPLIESFVARH 294 (294)
T ss_pred ---ccceEEeCCCCCC-hhhhCH-----HHHHHHHHHHHhcC
Confidence 4789999999997 555544 89999999999764
No 46
>PLN02511 hydrolase
Probab=99.54 E-value=1.2e-13 Score=141.71 Aligned_cols=232 Identities=14% Similarity=0.162 Sum_probs=130.6
Q ss_pred eeccCCCCeeEEEEeeCC--CCCCCcEEEEEcCCCccCCccc-chhHHHHHHHhCCcEEEEEecCCCCCCCh-------h
Q 012898 181 IVYGDQPRNRLDLYFPKS--SDGPKPVVAFITGGAWIIGYKA-WGSLLGQQLSERDIIVACIDYRNFPQGTI-------K 250 (454)
Q Consensus 181 v~y~~~~~~~l~vy~P~~--~~~~~Pvvv~~HGgg~~~g~~~-~~~~~~~~la~~G~~Vv~~dyr~~~~~~~-------~ 250 (454)
+...+++.+.++++.+.. .....|+||++||.+ .++.. +...+...+.++||.|+++|+|+++.+.. .
T Consensus 76 l~~~DG~~~~ldw~~~~~~~~~~~~p~vvllHG~~--g~s~~~y~~~~~~~~~~~g~~vv~~d~rG~G~s~~~~~~~~~~ 153 (388)
T PLN02511 76 LRTPDGGAVALDWVSGDDRALPADAPVLILLPGLT--GGSDDSYVRHMLLRARSKGWRVVVFNSRGCADSPVTTPQFYSA 153 (388)
T ss_pred EECCCCCEEEEEecCcccccCCCCCCEEEEECCCC--CCCCCHHHHHHHHHHHHCCCEEEEEecCCCCCCCCCCcCEEcC
Confidence 333444444566655421 234578999999953 22323 33446677778899999999999987643 2
Q ss_pred HHHHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCchHHHHHHHHHHHHHhh--hCCC-CCcccch----hhhh--------
Q 012898 251 DMVKDASQGISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLLEQAIKE--TGEG-ESTTWSV----SQIR-------- 315 (454)
Q Consensus 251 ~~~~D~~~al~~l~~~~~~~g~d~~rI~l~G~S~GG~la~~~a~~~~~~~--~~~~-~~~~~~~----~~i~-------- 315 (454)
...+|+..+++++.... ...+++++|||+||.+++.++.+++... .+.. ....+.. ..+.
T Consensus 154 ~~~~Dl~~~i~~l~~~~-----~~~~~~lvG~SlGg~i~~~yl~~~~~~~~v~~~v~is~p~~l~~~~~~~~~~~~~~y~ 228 (388)
T PLN02511 154 SFTGDLRQVVDHVAGRY-----PSANLYAAGWSLGANILVNYLGEEGENCPLSGAVSLCNPFDLVIADEDFHKGFNNVYD 228 (388)
T ss_pred CchHHHHHHHHHHHHHC-----CCCCEEEEEechhHHHHHHHHHhcCCCCCceEEEEECCCcCHHHHHHHHhccHHHHHH
Confidence 34778899999887642 2358999999999999999998866431 1110 0001100 0000
Q ss_pred --------hhccc-----c--CCCCCCh--------hhhhc-CCc--------c-cccCCCccccccCCCCCEEEEEeCC
Q 012898 316 --------AYFGL-----S--GGIMDGE--------ESLRQ-YSP--------E-VLVQDPNTRHAVSLLPPIILFHGTA 362 (454)
Q Consensus 316 --------~~~~~-----~--g~~~~~~--------~~~~~-~~p--------~-~~~~~~~~~~~~~~~pPvLiihGe~ 362 (454)
..+.. . ....... ..+.. +.. . .+..........+...|+|+++|++
T Consensus 229 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~t~~~~gf~~~~~yy~~~s~~~~L~~I~vPtLiI~g~d 308 (388)
T PLN02511 229 KALAKALRKIFAKHALLFEGLGGEYNIPLVANAKTVRDFDDGLTRVSFGFKSVDAYYSNSSSSDSIKHVRVPLLCIQAAN 308 (388)
T ss_pred HHHHHHHHHHHHHHHHHHhhCCCccCHHHHHhCCCHHHHHHhhhhhcCCCCCHHHHHHHcCchhhhccCCCCeEEEEcCC
Confidence 00000 0 0000000 00000 000 0 0001111223344567999999999
Q ss_pred CCCCChHHH-HHHHHHHHHcCCCEEEEEeCCCCccccccCCCCC-CcHHHHHHHHHHHHHhcCh
Q 012898 363 DYSIPADAS-KNFANTLQRVGVRAESILYEGKTHTDLFLQDPMR-GGKDDMFEDIVAIIHADDQ 424 (454)
Q Consensus 363 D~~Vp~~~s-~~l~~~l~~~g~~vel~~~~g~~H~~~~l~~p~~-~~~~~~~~~i~~Fl~~~~~ 424 (454)
|.++|.+.. ....+ ...++++++++++||. .+++.|.. .....+.+.+.+|++....
T Consensus 309 Dpi~p~~~~~~~~~~----~~p~~~l~~~~~gGH~-~~~E~p~~~~~~~w~~~~i~~Fl~~~~~ 367 (388)
T PLN02511 309 DPIAPARGIPREDIK----ANPNCLLIVTPSGGHL-GWVAGPEAPFGAPWTDPVVMEFLEALEE 367 (388)
T ss_pred CCcCCcccCcHhHHh----cCCCEEEEECCCccee-ccccCCCCCCCCccHHHHHHHHHHHHHH
Confidence 999987644 22322 2347999999999998 44444421 1112456777888876543
No 47
>COG0400 Predicted esterase [General function prediction only]
Probab=99.54 E-value=3.6e-13 Score=125.33 Aligned_cols=178 Identities=22% Similarity=0.246 Sum_probs=123.1
Q ss_pred CCCCcEEEEEcCCCccCCcccchhHHHHHHHhCCcEEEEEecCC-----------CCCCCh--hHHHHHHHHHHHHHHHh
Q 012898 200 DGPKPVVAFITGGAWIIGYKAWGSLLGQQLSERDIIVACIDYRN-----------FPQGTI--KDMVKDASQGISFVCNN 266 (454)
Q Consensus 200 ~~~~Pvvv~~HGgg~~~g~~~~~~~~~~~la~~G~~Vv~~dyr~-----------~~~~~~--~~~~~D~~~al~~l~~~ 266 (454)
++..|+||++||-| |+...+..+...+.- ++.++.+.=+. .....+ .....+.....+++...
T Consensus 15 ~p~~~~iilLHG~G---gde~~~~~~~~~~~P-~~~~is~rG~v~~~g~~~~f~~~~~~~~d~edl~~~~~~~~~~l~~~ 90 (207)
T COG0400 15 DPAAPLLILLHGLG---GDELDLVPLPELILP-NATLVSPRGPVAENGGPRFFRRYDEGSFDQEDLDLETEKLAEFLEEL 90 (207)
T ss_pred CCCCcEEEEEecCC---CChhhhhhhhhhcCC-CCeEEcCCCCccccCcccceeecCCCccchhhHHHHHHHHHHHHHHH
Confidence 45678999999954 444443333333332 46666553221 111112 22344566777888888
Q ss_pred hhhcCCCCCcEEEEEcCchHHHHHHHHHHHHHhhhCCCCCcccchhhhhhhccccCCCCCChhhhhcCCcccccCCCccc
Q 012898 267 ISEYGGDPDRIYLMGQSAGAHIAACTLLEQAIKETGEGESTTWSVSQIRAYFGLSGGIMDGEESLRQYSPEVLVQDPNTR 346 (454)
Q Consensus 267 ~~~~g~d~~rI~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~~~~~p~~~~~~~~~~ 346 (454)
..++++|.+|++++|+|.||++++.+..+++ ..+.+.+...|....... .
T Consensus 91 ~~~~gi~~~~ii~~GfSqGA~ial~~~l~~~--------------~~~~~ail~~g~~~~~~~----------------~ 140 (207)
T COG0400 91 AEEYGIDSSRIILIGFSQGANIALSLGLTLP--------------GLFAGAILFSGMLPLEPE----------------L 140 (207)
T ss_pred HHHhCCChhheEEEecChHHHHHHHHHHhCc--------------hhhccchhcCCcCCCCCc----------------c
Confidence 8899999999999999999999999998753 334555555552111100 0
Q ss_pred cccCCCCCEEEEEeCCCCCCChHHHHHHHHHHHHcCCCEEEEEeCCCCccccccCCCCCCcHHHHHHHHHHHHHhc
Q 012898 347 HAVSLLPPIILFHGTADYSIPADASKNFANTLQRVGVRAESILYEGKTHTDLFLQDPMRGGKDDMFEDIVAIIHAD 422 (454)
Q Consensus 347 ~~~~~~pPvLiihGe~D~~Vp~~~s~~l~~~l~~~g~~vel~~~~g~~H~~~~l~~p~~~~~~~~~~~i~~Fl~~~ 422 (454)
.......|++++||+.|++||...+.++.+.+++.|.+++++.++ +||. + ..+.++.+.+|+.+.
T Consensus 141 ~~~~~~~pill~hG~~Dpvvp~~~~~~l~~~l~~~g~~v~~~~~~-~GH~-i---------~~e~~~~~~~wl~~~ 205 (207)
T COG0400 141 LPDLAGTPILLSHGTEDPVVPLALAEALAEYLTASGADVEVRWHE-GGHE-I---------PPEELEAARSWLANT 205 (207)
T ss_pred ccccCCCeEEEeccCcCCccCHHHHHHHHHHHHHcCCCEEEEEec-CCCc-C---------CHHHHHHHHHHHHhc
Confidence 001123599999999999999999999999999999999999999 7997 2 257888888898764
No 48
>PRK03592 haloalkane dehalogenase; Provisional
Probab=99.53 E-value=2.3e-13 Score=133.91 Aligned_cols=207 Identities=13% Similarity=0.165 Sum_probs=119.4
Q ss_pred CcEEEEEcCCCccCCcccchhHHHHHHHhCCcEEEEEecCCCCCCChhHHHHHHHHHHHHHHHhhhhcCCCCCcEEEEEc
Q 012898 203 KPVVAFITGGAWIIGYKAWGSLLGQQLSERDIIVACIDYRNFPQGTIKDMVKDASQGISFVCNNISEYGGDPDRIYLMGQ 282 (454)
Q Consensus 203 ~Pvvv~~HGgg~~~g~~~~~~~~~~~la~~G~~Vv~~dyr~~~~~~~~~~~~D~~~al~~l~~~~~~~g~d~~rI~l~G~ 282 (454)
.|.|||+||.+ ++...+..+.+.|++.+ .|+++|.||+|.+..+..-.+.....+.+.+.++..++ +++.++||
T Consensus 27 g~~vvllHG~~---~~~~~w~~~~~~L~~~~-~via~D~~G~G~S~~~~~~~~~~~~a~dl~~ll~~l~~--~~~~lvGh 100 (295)
T PRK03592 27 GDPIVFLHGNP---TSSYLWRNIIPHLAGLG-RCLAPDLIGMGASDKPDIDYTFADHARYLDAWFDALGL--DDVVLVGH 100 (295)
T ss_pred CCEEEEECCCC---CCHHHHHHHHHHHhhCC-EEEEEcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCC--CCeEEEEE
Confidence 47899999953 45556677888898886 99999999999876542111222222333333333344 58999999
Q ss_pred CchHHHHHHHHHHHHHhhhCCCCCc------ccc--hhhhhhhc---ccc--CC-CC------------------CChhh
Q 012898 283 SAGAHIAACTLLEQAIKETGEGEST------TWS--VSQIRAYF---GLS--GG-IM------------------DGEES 330 (454)
Q Consensus 283 S~GG~la~~~a~~~~~~~~~~~~~~------~~~--~~~i~~~~---~~~--g~-~~------------------~~~~~ 330 (454)
|+||.+++.++.+++.......... .+. .......+ ... +. .. ...+.
T Consensus 101 S~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (295)
T PRK03592 101 DWGSALGFDWAARHPDRVRGIAFMEAIVRPMTWDDFPPAVRELFQALRSPGEGEEMVLEENVFIERVLPGSILRPLSDEE 180 (295)
T ss_pred CHHHHHHHHHHHhChhheeEEEEECCCCCCcchhhcchhHHHHHHHHhCcccccccccchhhHHhhcccCcccccCCHHH
Confidence 9999999999998876543321100 000 00000000 000 00 00 00000
Q ss_pred hhc----C-Ccccc------cC----C-C---------cc-ccccCCCCCEEEEEeCCCCCCChHHHHHHHHHHHHcCCC
Q 012898 331 LRQ----Y-SPEVL------VQ----D-P---------NT-RHAVSLLPPIILFHGTADYSIPADASKNFANTLQRVGVR 384 (454)
Q Consensus 331 ~~~----~-~p~~~------~~----~-~---------~~-~~~~~~~pPvLiihGe~D~~Vp~~~s~~l~~~l~~~g~~ 384 (454)
+.. + .+... .. . . .. ........|+|++||++|..++.....++...+.. +
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~---~ 257 (295)
T PRK03592 181 MAVYRRPFPTPESRRPTLSWPRELPIDGEPADVVALVEEYAQWLATSDVPKLLINAEPGAILTTGAIRDWCRSWPN---Q 257 (295)
T ss_pred HHHHHhhcCCchhhhhhhhhhhhcCCCCcchhhHhhhhHhHHHhccCCCCeEEEeccCCcccCcHHHHHHHHHhhh---h
Confidence 000 0 00000 00 0 0 00 01123467999999999999955555555443322 5
Q ss_pred EEEEEeCCCCccccccCCCCCCcHHHHHHHHHHHHHhcCh
Q 012898 385 AESILYEGKTHTDLFLQDPMRGGKDDMFEDIVAIIHADDQ 424 (454)
Q Consensus 385 vel~~~~g~~H~~~~l~~p~~~~~~~~~~~i~~Fl~~~~~ 424 (454)
.++++++++||. .+... .+++.+.+.+|+++..+
T Consensus 258 ~~~~~i~~~gH~-~~~e~-----p~~v~~~i~~fl~~~~~ 291 (295)
T PRK03592 258 LEITVFGAGLHF-AQEDS-----PEEIGAAIAAWLRRLRL 291 (295)
T ss_pred cceeeccCcchh-hhhcC-----HHHHHHHHHHHHHHhcc
Confidence 789999999997 44444 48999999999997654
No 49
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=99.52 E-value=1.8e-13 Score=140.72 Aligned_cols=220 Identities=17% Similarity=0.120 Sum_probs=144.3
Q ss_pred CeeEEEEeeCC--CCCCCcEEEEEcCCCccCC---cccc-hhHHHHHHHhCCcEEEEEecCCCCCCChh-----------
Q 012898 188 RNRLDLYFPKS--SDGPKPVVAFITGGAWIIG---YKAW-GSLLGQQLSERDIIVACIDYRNFPQGTIK----------- 250 (454)
Q Consensus 188 ~~~l~vy~P~~--~~~~~Pvvv~~HGgg~~~g---~~~~-~~~~~~~la~~G~~Vv~~dyr~~~~~~~~----------- 250 (454)
.++.-+|.|.+ ..++.|+|+++.||..+.- +..+ ...-...||+.||.||.+|-||....+..
T Consensus 625 ~lYgmiyKPhn~~pgkkYptvl~VYGGP~VQlVnnsfkgi~ylR~~~LaslGy~Vv~IDnRGS~hRGlkFE~~ik~kmGq 704 (867)
T KOG2281|consen 625 TLYGMIYKPHNFQPGKKYPTVLNVYGGPGVQLVNNSFKGIQYLRFCRLASLGYVVVFIDNRGSAHRGLKFESHIKKKMGQ 704 (867)
T ss_pred EEEEEEEccccCCCCCCCceEEEEcCCCceEEeeccccceehhhhhhhhhcceEEEEEcCCCccccchhhHHHHhhccCe
Confidence 34566999985 5567999999999974421 1111 12245788999999999999986554421
Q ss_pred HHHHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCchHHHHHHHHHHHHHhhhCCCCCcccchhhhhhhccccCC----CC-
Q 012898 251 DMVKDASQGISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLLEQAIKETGEGESTTWSVSQIRAYFGLSGG----IM- 325 (454)
Q Consensus 251 ~~~~D~~~al~~l~~~~~~~g~d~~rI~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~~i~~~~~~~g~----~~- 325 (454)
..++|+..+++||.+... -+|.+||+|-|+|.||+++++.+.+++.......+... ...+..+-..+-. ..
T Consensus 705 VE~eDQVeglq~Laeq~g--fidmdrV~vhGWSYGGYLSlm~L~~~P~IfrvAIAGap--VT~W~~YDTgYTERYMg~P~ 780 (867)
T KOG2281|consen 705 VEVEDQVEGLQMLAEQTG--FIDMDRVGVHGWSYGGYLSLMGLAQYPNIFRVAIAGAP--VTDWRLYDTGYTERYMGYPD 780 (867)
T ss_pred eeehhhHHHHHHHHHhcC--cccchheeEeccccccHHHHHHhhcCcceeeEEeccCc--ceeeeeecccchhhhcCCCc
Confidence 137899999999988654 27999999999999999999999987655432211111 1111111111000 00
Q ss_pred CChhhhhcCCcccccCCCccccccCCCCCEEEEEeCCCCCCChHHHHHHHHHHHHcCCCEEEEEeCCCCccccccCCCCC
Q 012898 326 DGEESLRQYSPEVLVQDPNTRHAVSLLPPIILFHGTADYSIPADASKNFANTLQRVGVRAESILYEGKTHTDLFLQDPMR 405 (454)
Q Consensus 326 ~~~~~~~~~~p~~~~~~~~~~~~~~~~pPvLiihGe~D~~Vp~~~s~~l~~~l~~~g~~vel~~~~g~~H~~~~l~~p~~ 405 (454)
..+..+..-+-.... ..........|++||-.|+.|-+.+...+..+|-++|++.++.+||+..|. + . ..
T Consensus 781 ~nE~gY~agSV~~~V-----eklpdepnRLlLvHGliDENVHF~Hts~Lvs~lvkagKpyeL~IfP~ERHs-i--R--~~ 850 (867)
T KOG2281|consen 781 NNEHGYGAGSVAGHV-----EKLPDEPNRLLLVHGLIDENVHFAHTSRLVSALVKAGKPYELQIFPNERHS-I--R--NP 850 (867)
T ss_pred cchhcccchhHHHHH-----hhCCCCCceEEEEecccccchhhhhHHHHHHHHHhCCCceEEEEccccccc-c--C--CC
Confidence 000000000000000 011111125899999999999999999999999999999999999999998 2 2 22
Q ss_pred CcHHHHHHHHHHHHHh
Q 012898 406 GGKDDMFEDIVAIIHA 421 (454)
Q Consensus 406 ~~~~~~~~~i~~Fl~~ 421 (454)
+...-+-.+++.|+.+
T Consensus 851 es~~~yE~rll~FlQ~ 866 (867)
T KOG2281|consen 851 ESGIYYEARLLHFLQE 866 (867)
T ss_pred ccchhHHHHHHHHHhh
Confidence 3445677888899875
No 50
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=99.52 E-value=2.5e-13 Score=127.30 Aligned_cols=90 Identities=21% Similarity=0.219 Sum_probs=64.7
Q ss_pred cEEEEEcCCCccCCcccchhHHHHHHHhCCcEEEEEecCCCCCCChhH--HHHHHHHHHHH-HHHhhhhcCCCCCcEEEE
Q 012898 204 PVVAFITGGAWIIGYKAWGSLLGQQLSERDIIVACIDYRNFPQGTIKD--MVKDASQGISF-VCNNISEYGGDPDRIYLM 280 (454)
Q Consensus 204 Pvvv~~HGgg~~~g~~~~~~~~~~~la~~G~~Vv~~dyr~~~~~~~~~--~~~D~~~al~~-l~~~~~~~g~d~~rI~l~ 280 (454)
|+||++||.+ ++...+..+...|+ .||.|+++|+|+++.+..+. ...+..+.+++ +......+ +.+++.++
T Consensus 2 ~~vv~~hG~~---~~~~~~~~~~~~L~-~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~ 75 (251)
T TIGR03695 2 PVLVFLHGFL---GSGADWQALIELLG-PHFRCLAIDLPGHGSSQSPDEIERYDFEEAAQDILATLLDQL--GIEPFFLV 75 (251)
T ss_pred CEEEEEcCCC---CchhhHHHHHHHhc-ccCeEEEEcCCCCCCCCCCCccChhhHHHHHHHHHHHHHHHc--CCCeEEEE
Confidence 7899999953 45556777888888 89999999999988775432 22344444444 33333333 34689999
Q ss_pred EcCchHHHHHHHHHHHHHh
Q 012898 281 GQSAGAHIAACTLLEQAIK 299 (454)
Q Consensus 281 G~S~GG~la~~~a~~~~~~ 299 (454)
|||+||.++..++.+.+..
T Consensus 76 G~S~Gg~ia~~~a~~~~~~ 94 (251)
T TIGR03695 76 GYSMGGRIALYYALQYPER 94 (251)
T ss_pred EeccHHHHHHHHHHhCchh
Confidence 9999999999999876543
No 51
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=99.52 E-value=4.9e-13 Score=128.79 Aligned_cols=201 Identities=19% Similarity=0.229 Sum_probs=112.1
Q ss_pred CCcEEEEEcCCCccCCcccchhHHHHHHHhCCcEEEEEecCCCCCCChhH------HHHHHHHHHHHHHHhhhhcCCCCC
Q 012898 202 PKPVVAFITGGAWIIGYKAWGSLLGQQLSERDIIVACIDYRNFPQGTIKD------MVKDASQGISFVCNNISEYGGDPD 275 (454)
Q Consensus 202 ~~Pvvv~~HGgg~~~g~~~~~~~~~~~la~~G~~Vv~~dyr~~~~~~~~~------~~~D~~~al~~l~~~~~~~g~d~~ 275 (454)
..|.|||+||++. ++..++..+...+.+.||.|+++|+|+++.+..+. .+++....+..+.+ .++ .+
T Consensus 24 ~~~~vl~~hG~~g--~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~---~~~--~~ 96 (288)
T TIGR01250 24 EKIKLLLLHGGPG--MSHEYLENLRELLKEEGREVIMYDQLGCGYSDQPDDSDELWTIDYFVDELEEVRE---KLG--LD 96 (288)
T ss_pred CCCeEEEEcCCCC--ccHHHHHHHHHHHHhcCCEEEEEcCCCCCCCCCCCcccccccHHHHHHHHHHHHH---HcC--CC
Confidence 3578999999642 33344455666666669999999999988765431 23333333333333 333 35
Q ss_pred cEEEEEcCchHHHHHHHHHHHHHhhhCCCCCccc--chhh---hhhhccccC-------------CCCCCh---hhhhcC
Q 012898 276 RIYLMGQSAGAHIAACTLLEQAIKETGEGESTTW--SVSQ---IRAYFGLSG-------------GIMDGE---ESLRQY 334 (454)
Q Consensus 276 rI~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~--~~~~---i~~~~~~~g-------------~~~~~~---~~~~~~ 334 (454)
+++++|||+||.++..++...+............ .... ......... ...... .....+
T Consensus 97 ~~~liG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (288)
T TIGR01250 97 KFYLLGHSWGGMLAQEYALKYGQHLKGLIISSMLDSAPEYVKELNRLRKELPPEVRAAIKRCEASGDYDNPEYQEAVEVF 176 (288)
T ss_pred cEEEEEeehHHHHHHHHHHhCccccceeeEecccccchHHHHHHHHHHhhcChhHHHHHHHHHhccCcchHHHHHHHHHH
Confidence 7999999999999999998765432222110000 0000 000000000 000000 000000
Q ss_pred ----------Ccc---------------------ccc-----CC-CccccccCCCCCEEEEEeCCCCCCChHHHHHHHHH
Q 012898 335 ----------SPE---------------------VLV-----QD-PNTRHAVSLLPPIILFHGTADYSIPADASKNFANT 377 (454)
Q Consensus 335 ----------~p~---------------------~~~-----~~-~~~~~~~~~~pPvLiihGe~D~~Vp~~~s~~l~~~ 377 (454)
.+. ... .. ...........|+++++|+.|.+ +.+..+.+.+.
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~-~~~~~~~~~~~ 255 (288)
T TIGR01250 177 YHHLLCRTRKWPEALKHLKSGMNTNVYNIMQGPNEFTITGNLKDWDITDKLSEIKVPTLLTVGEFDTM-TPEAAREMQEL 255 (288)
T ss_pred HHHhhcccccchHHHHHHhhccCHHHHhcccCCccccccccccccCHHHHhhccCCCEEEEecCCCcc-CHHHHHHHHHh
Confidence 000 000 00 00012233457999999999985 56777777766
Q ss_pred HHHcCCCEEEEEeCCCCccccccCCCCCCcHHHHHHHHHHHHH
Q 012898 378 LQRVGVRAESILYEGKTHTDLFLQDPMRGGKDDMFEDIVAIIH 420 (454)
Q Consensus 378 l~~~g~~vel~~~~g~~H~~~~l~~p~~~~~~~~~~~i~~Fl~ 420 (454)
+. ++++++++++||. .++.+| +++.+.|.+|++
T Consensus 256 ~~----~~~~~~~~~~gH~-~~~e~p-----~~~~~~i~~fl~ 288 (288)
T TIGR01250 256 IA----GSRLVVFPDGSHM-TMIEDP-----EVYFKLLSDFIR 288 (288)
T ss_pred cc----CCeEEEeCCCCCC-cccCCH-----HHHHHHHHHHhC
Confidence 54 5688999999997 444444 889999999974
No 52
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=99.51 E-value=1.8e-13 Score=128.47 Aligned_cols=196 Identities=15% Similarity=0.202 Sum_probs=115.9
Q ss_pred CcEEEEEcCCCccCCcccchhHHHHHHHhCCcEEEEEecCCCCCCChhHHHHHHHHHHHHHHHhhhhcCCCCCcEEEEEc
Q 012898 203 KPVVAFITGGAWIIGYKAWGSLLGQQLSERDIIVACIDYRNFPQGTIKDMVKDASQGISFVCNNISEYGGDPDRIYLMGQ 282 (454)
Q Consensus 203 ~Pvvv~~HGgg~~~g~~~~~~~~~~~la~~G~~Vv~~dyr~~~~~~~~~~~~D~~~al~~l~~~~~~~g~d~~rI~l~G~ 282 (454)
.|.||++||.+ ++...+..+...|++ +|.|+++|+|+++.+.... ..+....++.+.+.. .++++++||
T Consensus 4 ~~~iv~~HG~~---~~~~~~~~~~~~l~~-~~~vi~~d~~G~G~s~~~~-~~~~~~~~~~~~~~~------~~~~~lvG~ 72 (245)
T TIGR01738 4 NVHLVLIHGWG---MNAEVFRCLDEELSA-HFTLHLVDLPGHGRSRGFG-PLSLADAAEAIAAQA------PDPAIWLGW 72 (245)
T ss_pred CceEEEEcCCC---CchhhHHHHHHhhcc-CeEEEEecCCcCccCCCCC-CcCHHHHHHHHHHhC------CCCeEEEEE
Confidence 37899999953 455556667777764 6999999999998765322 123444444444432 258999999
Q ss_pred CchHHHHHHHHHHHHHhhhCCCCCc---------ccc----hhhhhhh---------------ccc--cCCCCCChh--h
Q 012898 283 SAGAHIAACTLLEQAIKETGEGEST---------TWS----VSQIRAY---------------FGL--SGGIMDGEE--S 330 (454)
Q Consensus 283 S~GG~la~~~a~~~~~~~~~~~~~~---------~~~----~~~i~~~---------------~~~--~g~~~~~~~--~ 330 (454)
|+||.+++.++.+++.......... .+. ...+..+ ... .+....... .
T Consensus 73 S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (245)
T TIGR01738 73 SLGGLVALHIAATHPDRVRALVTVASSPCFSAREDWPEGIKPDVLTGFQQQLSDDYQRTIERFLALQTLGTPTARQDARA 152 (245)
T ss_pred cHHHHHHHHHHHHCHHhhheeeEecCCcccccCCcccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCccchHHHH
Confidence 9999999999987665433221100 000 0000000 000 000000000 0
Q ss_pred h-hcC----Cc--cc-------ccCCCccccccCCCCCEEEEEeCCCCCCChHHHHHHHHHHHHcCCCEEEEEeCCCCcc
Q 012898 331 L-RQY----SP--EV-------LVQDPNTRHAVSLLPPIILFHGTADYSIPADASKNFANTLQRVGVRAESILYEGKTHT 396 (454)
Q Consensus 331 ~-~~~----~p--~~-------~~~~~~~~~~~~~~pPvLiihGe~D~~Vp~~~s~~l~~~l~~~g~~vel~~~~g~~H~ 396 (454)
+ ..+ .+ .. ...........+...|+++++|++|..+|.+..+.+++.++ ++++++++++||.
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~----~~~~~~~~~~gH~ 228 (245)
T TIGR01738 153 LKQTLLARPTPNVQVLQAGLEILATVDLRQPLQNISVPFLRLYGYLDGLVPAKVVPYLDKLAP----HSELYIFAKAAHA 228 (245)
T ss_pred HHHHhhccCCCCHHHHHHHHHHhhcccHHHHHhcCCCCEEEEeecCCcccCHHHHHHHHHhCC----CCeEEEeCCCCCC
Confidence 0 000 00 00 00000011233556799999999999999988888877665 6889999999998
Q ss_pred ccccCCCCCCcHHHHHHHHHHHH
Q 012898 397 DLFLQDPMRGGKDDMFEDIVAII 419 (454)
Q Consensus 397 ~~~l~~p~~~~~~~~~~~i~~Fl 419 (454)
.++.+ .+++.+.+.+||
T Consensus 229 -~~~e~-----p~~~~~~i~~fi 245 (245)
T TIGR01738 229 -PFLSH-----AEAFCALLVAFK 245 (245)
T ss_pred -ccccC-----HHHHHHHHHhhC
Confidence 44444 489999998885
No 53
>PRK11071 esterase YqiA; Provisional
Probab=99.50 E-value=3.2e-13 Score=124.90 Aligned_cols=182 Identities=18% Similarity=0.218 Sum_probs=104.2
Q ss_pred cEEEEEcCCCccCCcccchh--HHHHHHHhC--CcEEEEEecCCCCCCChhHHHHHHHHHHHHHHHhhhhcCCCCCcEEE
Q 012898 204 PVVAFITGGAWIIGYKAWGS--LLGQQLSER--DIIVACIDYRNFPQGTIKDMVKDASQGISFVCNNISEYGGDPDRIYL 279 (454)
Q Consensus 204 Pvvv~~HGgg~~~g~~~~~~--~~~~~la~~--G~~Vv~~dyr~~~~~~~~~~~~D~~~al~~l~~~~~~~g~d~~rI~l 279 (454)
|.|||+||-+ ++...+. .+...+++. ++.|+++|.++++ .+..+.+. +.+..++. +++.+
T Consensus 2 p~illlHGf~---ss~~~~~~~~~~~~l~~~~~~~~v~~~dl~g~~--------~~~~~~l~---~l~~~~~~--~~~~l 65 (190)
T PRK11071 2 STLLYLHGFN---SSPRSAKATLLKNWLAQHHPDIEMIVPQLPPYP--------ADAAELLE---SLVLEHGG--DPLGL 65 (190)
T ss_pred CeEEEECCCC---CCcchHHHHHHHHHHHHhCCCCeEEeCCCCCCH--------HHHHHHHH---HHHHHcCC--CCeEE
Confidence 6899999932 3333222 345666653 7999999999763 23333333 33333333 58999
Q ss_pred EEcCchHHHHHHHHHHHHHhhhCCCCCcccchhhhhhhccccCCCCCChhhhhcCCcccccCC--CccccccCCCCCEEE
Q 012898 280 MGQSAGAHIAACTLLEQAIKETGEGESTTWSVSQIRAYFGLSGGIMDGEESLRQYSPEVLVQD--PNTRHAVSLLPPIIL 357 (454)
Q Consensus 280 ~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~~~~~p~~~~~~--~~~~~~~~~~pPvLi 357 (454)
+|+|+||.+++.++.+.+.+. ............+..+.+.......... ..+........ ..... .....|+++
T Consensus 66 vG~S~Gg~~a~~~a~~~~~~~-vl~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~d~~~~~~~~-i~~~~~v~i 141 (190)
T PRK11071 66 VGSSLGGYYATWLSQCFMLPA-VVVNPAVRPFELLTDYLGENENPYTGQQ--YVLESRHIYDLKVMQIDP-LESPDLIWL 141 (190)
T ss_pred EEECHHHHHHHHHHHHcCCCE-EEECCCCCHHHHHHHhcCCcccccCCCc--EEEcHHHHHHHHhcCCcc-CCChhhEEE
Confidence 999999999999998765211 1111111011112211111100000000 00000000000 00111 223448899
Q ss_pred EEeCCCCCCChHHHHHHHHHHHHcCCCEEEEEeCCCCccccccCCCCCCcHHHHHHHHHHHHH
Q 012898 358 FHGTADYSIPADASKNFANTLQRVGVRAESILYEGKTHTDLFLQDPMRGGKDDMFEDIVAIIH 420 (454)
Q Consensus 358 ihGe~D~~Vp~~~s~~l~~~l~~~g~~vel~~~~g~~H~~~~l~~p~~~~~~~~~~~i~~Fl~ 420 (454)
+||++|++||++.+.++++. ++.++++|++|.+. ..+++++.+.+|+.
T Consensus 142 ihg~~De~V~~~~a~~~~~~-------~~~~~~~ggdH~f~--------~~~~~~~~i~~fl~ 189 (190)
T PRK11071 142 LQQTGDEVLDYRQAVAYYAA-------CRQTVEEGGNHAFV--------GFERYFNQIVDFLG 189 (190)
T ss_pred EEeCCCCcCCHHHHHHHHHh-------cceEEECCCCcchh--------hHHHhHHHHHHHhc
Confidence 99999999999999999994 35667899999832 23789999999975
No 54
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=99.50 E-value=6.6e-13 Score=134.94 Aligned_cols=209 Identities=16% Similarity=0.137 Sum_probs=115.3
Q ss_pred CCcEEEEEcCCCccCCcccchhHHHHHHHhCCcEEEEEecCCCCCCChhHH-HHHHHHHHHHHHHhhhhcCCCCCcEEEE
Q 012898 202 PKPVVAFITGGAWIIGYKAWGSLLGQQLSERDIIVACIDYRNFPQGTIKDM-VKDASQGISFVCNNISEYGGDPDRIYLM 280 (454)
Q Consensus 202 ~~Pvvv~~HGgg~~~g~~~~~~~~~~~la~~G~~Vv~~dyr~~~~~~~~~~-~~D~~~al~~l~~~~~~~g~d~~rI~l~ 280 (454)
..|.|||+||.+ ++...|..+...|++ +|.|+++|++|+|.+..+.. ..+.....+.+.+.+...+. +++.|+
T Consensus 87 ~gp~lvllHG~~---~~~~~w~~~~~~L~~-~~~via~Dl~G~G~S~~~~~~~~~~~~~a~~l~~~l~~l~~--~~~~lv 160 (360)
T PLN02679 87 SGPPVLLVHGFG---ASIPHWRRNIGVLAK-NYTVYAIDLLGFGASDKPPGFSYTMETWAELILDFLEEVVQ--KPTVLI 160 (360)
T ss_pred CCCeEEEECCCC---CCHHHHHHHHHHHhc-CCEEEEECCCCCCCCCCCCCccccHHHHHHHHHHHHHHhcC--CCeEEE
Confidence 347899999954 444556667777765 79999999999998754321 11222222333333333333 589999
Q ss_pred EcCchHHHHHHHHHH-HHHhhhCCCCCc---cc------chhhhh---h------h-----------ccc----------
Q 012898 281 GQSAGAHIAACTLLE-QAIKETGEGEST---TW------SVSQIR---A------Y-----------FGL---------- 320 (454)
Q Consensus 281 G~S~GG~la~~~a~~-~~~~~~~~~~~~---~~------~~~~i~---~------~-----------~~~---------- 320 (454)
|||+||.+++.++.. ++.+..+..... .. ...... . . +..
T Consensus 161 GhS~Gg~ia~~~a~~~~P~rV~~LVLi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (360)
T PLN02679 161 GNSVGSLACVIAASESTRDLVRGLVLLNCAGGMNNKAVVDDWRIKLLLPLLWLIDFLLKQRGIASALFNRVKQRDNLKNI 240 (360)
T ss_pred EECHHHHHHHHHHHhcChhhcCEEEEECCccccccccccchHHHhhhcchHHHHHHHhhchhhHHHHHHHhcCHHHHHHH
Confidence 999999999887764 344332211000 00 000000 0 0 000
Q ss_pred ----cCCC-CCChhhhhcC----C-ccc------ccC---CCc-cccccCCCCCEEEEEeCCCCCCChHHH-HHHHHHHH
Q 012898 321 ----SGGI-MDGEESLRQY----S-PEV------LVQ---DPN-TRHAVSLLPPIILFHGTADYSIPADAS-KNFANTLQ 379 (454)
Q Consensus 321 ----~g~~-~~~~~~~~~~----~-p~~------~~~---~~~-~~~~~~~~pPvLiihGe~D~~Vp~~~s-~~l~~~l~ 379 (454)
.... ....+....+ . +.. ... ... .........|+|+++|++|.++|.+.. .++.+.+.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PtLii~G~~D~~~p~~~~~~~~~~~l~ 320 (360)
T PLN02679 241 LLSVYGNKEAVDDELVEIIRGPADDEGALDAFVSIVTGPPGPNPIKLIPRISLPILVLWGDQDPFTPLDGPVGKYFSSLP 320 (360)
T ss_pred HHHhccCcccCCHHHHHHHHhhccCCChHHHHHHHHhcCCCCCHHHHhhhcCCCEEEEEeCCCCCcCchhhHHHHHHhhh
Confidence 0000 0000000000 0 000 000 000 012234457999999999999998743 23444454
Q ss_pred HcCCCEEEEEeCCCCccccccCCCCCCcHHHHHHHHHHHHHhc
Q 012898 380 RVGVRAESILYEGKTHTDLFLQDPMRGGKDDMFEDIVAIIHAD 422 (454)
Q Consensus 380 ~~g~~vel~~~~g~~H~~~~l~~p~~~~~~~~~~~i~~Fl~~~ 422 (454)
+.-.++++++++++||. .+++ ..+++.+.|.+||++.
T Consensus 321 ~~ip~~~l~~i~~aGH~-~~~E-----~Pe~~~~~I~~FL~~~ 357 (360)
T PLN02679 321 SQLPNVTLYVLEGVGHC-PHDD-----RPDLVHEKLLPWLAQL 357 (360)
T ss_pred ccCCceEEEEcCCCCCC-cccc-----CHHHHHHHHHHHHHhc
Confidence 43346899999999997 5444 4489999999999864
No 55
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=99.50 E-value=6.3e-13 Score=145.99 Aligned_cols=220 Identities=18% Similarity=0.158 Sum_probs=141.0
Q ss_pred eeEEEEeeCC--CCCCCcEEEEEcCCCccCC-cccchhHHHHH-HHhCCcEEEEEecCCCCCCChh-----------HHH
Q 012898 189 NRLDLYFPKS--SDGPKPVVAFITGGAWIIG-YKAWGSLLGQQ-LSERDIIVACIDYRNFPQGTIK-----------DMV 253 (454)
Q Consensus 189 ~~l~vy~P~~--~~~~~Pvvv~~HGgg~~~g-~~~~~~~~~~~-la~~G~~Vv~~dyr~~~~~~~~-----------~~~ 253 (454)
..+.+.+|++ ..++.|+||.+|||..... .......+... +...|++|+.+|+|+.+..+.. ..+
T Consensus 510 ~~~~~~lP~~~~~~~kyPllv~~yGGP~sq~v~~~~~~~~~~~~~s~~g~~v~~vd~RGs~~~G~~~~~~~~~~lG~~ev 589 (755)
T KOG2100|consen 510 ANAILILPPNFDPSKKYPLLVVVYGGPGSQSVTSKFSVDWNEVVVSSRGFAVLQVDGRGSGGYGWDFRSALPRNLGDVEV 589 (755)
T ss_pred EEEEEecCCCCCCCCCCCEEEEecCCCCcceeeeeEEecHHHHhhccCCeEEEEEcCCCcCCcchhHHHHhhhhcCCcch
Confidence 3566777874 4568999999999874111 11122234444 4556999999999997655432 247
Q ss_pred HHHHHHHHHHHHhhhhcCCCCCcEEEEEcCchHHHHHHHHHHHHHhhhCCCCCcccchhhhhhhccccCCCCCChhhhhc
Q 012898 254 KDASQGISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLLEQAIKETGEGESTTWSVSQIRAYFGLSGGIMDGEESLRQ 333 (454)
Q Consensus 254 ~D~~~al~~l~~~~~~~g~d~~rI~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~~~ 333 (454)
.|+..+++++.++. -+|.+||+|+|+|.||.+++.++...+.....+.. ...+...+.-+..... +.+..
T Consensus 590 ~D~~~~~~~~~~~~---~iD~~ri~i~GwSyGGy~t~~~l~~~~~~~fkcgv-avaPVtd~~~yds~~t------erymg 659 (755)
T KOG2100|consen 590 KDQIEAVKKVLKLP---FIDRSRVAIWGWSYGGYLTLKLLESDPGDVFKCGV-AVAPVTDWLYYDSTYT------ERYMG 659 (755)
T ss_pred HHHHHHHHHHHhcc---cccHHHeEEeccChHHHHHHHHhhhCcCceEEEEE-Eecceeeeeeeccccc------HhhcC
Confidence 78888888888875 48999999999999999999998875422222100 0001111111111110 00100
Q ss_pred CCccc---ccCCCccccccCCCCC-EEEEEeCCCCCCChHHHHHHHHHHHHcCCCEEEEEeCCCCccccccCCCCCCcHH
Q 012898 334 YSPEV---LVQDPNTRHAVSLLPP-IILFHGTADYSIPADASKNFANTLQRVGVRAESILYEGKTHTDLFLQDPMRGGKD 409 (454)
Q Consensus 334 ~~p~~---~~~~~~~~~~~~~~pP-vLiihGe~D~~Vp~~~s~~l~~~l~~~g~~vel~~~~g~~H~~~~l~~p~~~~~~ 409 (454)
..... +........+.....| .|++||+.|..|.++++.+++++|+..|+++++.+||+.+|.... .....
T Consensus 660 ~p~~~~~~y~e~~~~~~~~~~~~~~~LliHGt~DdnVh~q~s~~~~~aL~~~gv~~~~~vypde~H~is~-----~~~~~ 734 (755)
T KOG2100|consen 660 LPSENDKGYEESSVSSPANNIKTPKLLLIHGTEDDNVHFQQSAILIKALQNAGVPFRLLVYPDENHGISY-----VEVIS 734 (755)
T ss_pred CCccccchhhhccccchhhhhccCCEEEEEcCCcCCcCHHHHHHHHHHHHHCCCceEEEEeCCCCccccc-----ccchH
Confidence 00000 1111111112222223 599999999999999999999999999999999999999998332 22347
Q ss_pred HHHHHHHHHHHhcC
Q 012898 410 DMFEDIVAIIHADD 423 (454)
Q Consensus 410 ~~~~~i~~Fl~~~~ 423 (454)
.+...+..|+..+.
T Consensus 735 ~~~~~~~~~~~~~~ 748 (755)
T KOG2100|consen 735 HLYEKLDRFLRDCF 748 (755)
T ss_pred HHHHHHHHHHHHHc
Confidence 88999999999554
No 56
>PRK10349 carboxylesterase BioH; Provisional
Probab=99.49 E-value=4e-13 Score=129.33 Aligned_cols=195 Identities=16% Similarity=0.212 Sum_probs=114.7
Q ss_pred cEEEEEcCCCccCCcccchhHHHHHHHhCCcEEEEEecCCCCCCChhHHHHHHHHHHHHHHHhhhhcCCCCCcEEEEEcC
Q 012898 204 PVVAFITGGAWIIGYKAWGSLLGQQLSERDIIVACIDYRNFPQGTIKDMVKDASQGISFVCNNISEYGGDPDRIYLMGQS 283 (454)
Q Consensus 204 Pvvv~~HGgg~~~g~~~~~~~~~~~la~~G~~Vv~~dyr~~~~~~~~~~~~D~~~al~~l~~~~~~~g~d~~rI~l~G~S 283 (454)
|.|||+||.+ ++...|..+...|.+. |.|+++|+|++|.+..+.. .+....++.+.+ ++ .+++.++|||
T Consensus 14 ~~ivllHG~~---~~~~~w~~~~~~L~~~-~~vi~~Dl~G~G~S~~~~~-~~~~~~~~~l~~----~~--~~~~~lvGhS 82 (256)
T PRK10349 14 VHLVLLHGWG---LNAEVWRCIDEELSSH-FTLHLVDLPGFGRSRGFGA-LSLADMAEAVLQ----QA--PDKAIWLGWS 82 (256)
T ss_pred CeEEEECCCC---CChhHHHHHHHHHhcC-CEEEEecCCCCCCCCCCCC-CCHHHHHHHHHh----cC--CCCeEEEEEC
Confidence 5699999954 4445566677888654 9999999999987754321 122233333332 22 3689999999
Q ss_pred chHHHHHHHHHHHHHhhhCCCC--Cc-cc------ch---hhhhh---------------hccc--cCCCCCChhhhhc-
Q 012898 284 AGAHIAACTLLEQAIKETGEGE--ST-TW------SV---SQIRA---------------YFGL--SGGIMDGEESLRQ- 333 (454)
Q Consensus 284 ~GG~la~~~a~~~~~~~~~~~~--~~-~~------~~---~~i~~---------------~~~~--~g~~~~~~~~~~~- 333 (454)
+||.++..++.+.+........ .. .. .. ..+.. ++.. .+ ..........
T Consensus 83 ~Gg~ia~~~a~~~p~~v~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 161 (256)
T PRK10349 83 LGGLVASQIALTHPERVQALVTVASSPCFSARDEWPGIKPDVLAGFQQQLSDDFQRTVERFLALQTMG-TETARQDARAL 161 (256)
T ss_pred HHHHHHHHHHHhChHhhheEEEecCccceecCCCCCcccHHHHHHHHHHHHhchHHHHHHHHHHHHcc-CchHHHHHHHH
Confidence 9999999999876654332211 00 00 00 00000 0000 00 0000000000
Q ss_pred -------CCccc---------ccCCCccccccCCCCCEEEEEeCCCCCCChHHHHHHHHHHHHcCCCEEEEEeCCCCccc
Q 012898 334 -------YSPEV---------LVQDPNTRHAVSLLPPIILFHGTADYSIPADASKNFANTLQRVGVRAESILYEGKTHTD 397 (454)
Q Consensus 334 -------~~p~~---------~~~~~~~~~~~~~~pPvLiihGe~D~~Vp~~~s~~l~~~l~~~g~~vel~~~~g~~H~~ 397 (454)
..+.. ...........+...|+|+++|++|.++|.+.++.+.+.++ +.++++++++||.
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~i~----~~~~~~i~~~gH~- 236 (256)
T PRK10349 162 KKTVLALPMPEVDVLNGGLEILKTVDLRQPLQNVSMPFLRLYGYLDGLVPRKVVPMLDKLWP----HSESYIFAKAAHA- 236 (256)
T ss_pred HHHhhccCCCcHHHHHHHHHHHHhCccHHHHhhcCCCeEEEecCCCccCCHHHHHHHHHhCC----CCeEEEeCCCCCC-
Confidence 00000 00001112233456799999999999999988887777765 6799999999997
Q ss_pred cccCCCCCCcHHHHHHHHHHHHH
Q 012898 398 LFLQDPMRGGKDDMFEDIVAIIH 420 (454)
Q Consensus 398 ~~l~~p~~~~~~~~~~~i~~Fl~ 420 (454)
.+++.| +++.+.+.+|-.
T Consensus 237 ~~~e~p-----~~f~~~l~~~~~ 254 (256)
T PRK10349 237 PFISHP-----AEFCHLLVALKQ 254 (256)
T ss_pred ccccCH-----HHHHHHHHHHhc
Confidence 554544 788888888754
No 57
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=99.48 E-value=5.8e-13 Score=135.08 Aligned_cols=202 Identities=13% Similarity=0.122 Sum_probs=113.2
Q ss_pred CCCcEEEEEcCCCccCCcccchhHHHHHHHhCCcEEEEEecCCCCCCChhHHHHHHHHHHHHHHHhhhhcCCCCCcEEEE
Q 012898 201 GPKPVVAFITGGAWIIGYKAWGSLLGQQLSERDIIVACIDYRNFPQGTIKDMVKDASQGISFVCNNISEYGGDPDRIYLM 280 (454)
Q Consensus 201 ~~~Pvvv~~HGgg~~~g~~~~~~~~~~~la~~G~~Vv~~dyr~~~~~~~~~~~~D~~~al~~l~~~~~~~g~d~~rI~l~ 280 (454)
++.|.|||+||.+ ++...+..+...|.+. |.|+++|+++++.+.......+.....+.+.+.+..+ +.++++|+
T Consensus 129 ~~~~~vl~~HG~~---~~~~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~lv 202 (371)
T PRK14875 129 GDGTPVVLIHGFG---GDLNNWLFNHAALAAG-RPVIALDLPGHGASSKAVGAGSLDELAAAVLAFLDAL--GIERAHLV 202 (371)
T ss_pred CCCCeEEEECCCC---CccchHHHHHHHHhcC-CEEEEEcCCCCCCCCCCCCCCCHHHHHHHHHHHHHhc--CCccEEEE
Confidence 3467899999843 4555566677777654 9999999999987632211122223333333333333 45689999
Q ss_pred EcCchHHHHHHHHHHHHHhhhCCCCCcc--cch---hhh-hhhcccc-------------CC-CCCChhhhh---c----
Q 012898 281 GQSAGAHIAACTLLEQAIKETGEGESTT--WSV---SQI-RAYFGLS-------------GG-IMDGEESLR---Q---- 333 (454)
Q Consensus 281 G~S~GG~la~~~a~~~~~~~~~~~~~~~--~~~---~~i-~~~~~~~-------------g~-~~~~~~~~~---~---- 333 (454)
|||+||.++..++...+.+......... ... ..+ ..+.... .. ......... .
T Consensus 203 G~S~Gg~~a~~~a~~~~~~v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (371)
T PRK14875 203 GHSMGGAVALRLAARAPQRVASLTLIAPAGLGPEINGDYIDGFVAAESRRELKPVLELLFADPALVTRQMVEDLLKYKRL 282 (371)
T ss_pred eechHHHHHHHHHHhCchheeEEEEECcCCcCcccchhHHHHhhcccchhHHHHHHHHHhcChhhCCHHHHHHHHHHhcc
Confidence 9999999999988875433222110000 000 000 0000000 00 000000000 0
Q ss_pred ---------CCcccccC----CCccccccCCCCCEEEEEeCCCCCCChHHHHHHHHHHHHcCCCEEEEEeCCCCcccccc
Q 012898 334 ---------YSPEVLVQ----DPNTRHAVSLLPPIILFHGTADYSIPADASKNFANTLQRVGVRAESILYEGKTHTDLFL 400 (454)
Q Consensus 334 ---------~~p~~~~~----~~~~~~~~~~~pPvLiihGe~D~~Vp~~~s~~l~~~l~~~g~~vel~~~~g~~H~~~~l 400 (454)
+....... ...........+|+|++||++|..+|.++++.+.. .+++++++++||. .++
T Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~vp~~~~~~l~~-------~~~~~~~~~~gH~-~~~ 354 (371)
T PRK14875 283 DGVDDALRALADALFAGGRQRVDLRDRLASLAIPVLVIWGEQDRIIPAAHAQGLPD-------GVAVHVLPGAGHM-PQM 354 (371)
T ss_pred ccHHHHHHHHHHHhccCcccchhHHHHHhcCCCCEEEEEECCCCccCHHHHhhccC-------CCeEEEeCCCCCC-hhh
Confidence 00000000 00001223456799999999999999877655432 5788999999997 555
Q ss_pred CCCCCCcHHHHHHHHHHHHHh
Q 012898 401 QDPMRGGKDDMFEDIVAIIHA 421 (454)
Q Consensus 401 ~~p~~~~~~~~~~~i~~Fl~~ 421 (454)
.+| +++.+.|.+|+++
T Consensus 355 e~p-----~~~~~~i~~fl~~ 370 (371)
T PRK14875 355 EAA-----ADVNRLLAEFLGK 370 (371)
T ss_pred hCH-----HHHHHHHHHHhcc
Confidence 544 7888899999975
No 58
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=99.48 E-value=1.1e-12 Score=135.13 Aligned_cols=94 Identities=17% Similarity=0.135 Sum_probs=60.5
Q ss_pred CCCcEEEEEcCCCccCCcccchhHHHHHHHhCCcEEEEEecCCCCCCChhHH-HHHHHHH----HHHHHHhhhhcCCCCC
Q 012898 201 GPKPVVAFITGGAWIIGYKAWGSLLGQQLSERDIIVACIDYRNFPQGTIKDM-VKDASQG----ISFVCNNISEYGGDPD 275 (454)
Q Consensus 201 ~~~Pvvv~~HGgg~~~g~~~~~~~~~~~la~~G~~Vv~~dyr~~~~~~~~~~-~~D~~~a----l~~l~~~~~~~g~d~~ 275 (454)
++.|+||++||.++ +...+......|++ +|.|+++|+|+++.+..+.. ..+...+ ++.+.+..... +.+
T Consensus 103 ~~~p~vvllHG~~~---~~~~~~~~~~~L~~-~~~vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~i~~~~~~l--~~~ 176 (402)
T PLN02894 103 EDAPTLVMVHGYGA---SQGFFFRNFDALAS-RFRVIAIDQLGWGGSSRPDFTCKSTEETEAWFIDSFEEWRKAK--NLS 176 (402)
T ss_pred CCCCEEEEECCCCc---chhHHHHHHHHHHh-CCEEEEECCCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHc--CCC
Confidence 35689999999653 33344445567765 59999999999987653321 1111111 12222222222 345
Q ss_pred cEEEEEcCchHHHHHHHHHHHHHhh
Q 012898 276 RIYLMGQSAGAHIAACTLLEQAIKE 300 (454)
Q Consensus 276 rI~l~G~S~GG~la~~~a~~~~~~~ 300 (454)
+++|+|||+||.+++.++.+++...
T Consensus 177 ~~~lvGhS~GG~la~~~a~~~p~~v 201 (402)
T PLN02894 177 NFILLGHSFGGYVAAKYALKHPEHV 201 (402)
T ss_pred CeEEEEECHHHHHHHHHHHhCchhh
Confidence 8999999999999999998876543
No 59
>PRK06489 hypothetical protein; Provisional
Probab=99.48 E-value=2.9e-12 Score=130.17 Aligned_cols=63 Identities=8% Similarity=0.132 Sum_probs=50.8
Q ss_pred CCCCCEEEEEeCCCCCCChHHH--HHHHHHHHHcCCCEEEEEeCCC----CccccccCCCCCCcHHHHHHHHHHHHHhcC
Q 012898 350 SLLPPIILFHGTADYSIPADAS--KNFANTLQRVGVRAESILYEGK----THTDLFLQDPMRGGKDDMFEDIVAIIHADD 423 (454)
Q Consensus 350 ~~~pPvLiihGe~D~~Vp~~~s--~~l~~~l~~~g~~vel~~~~g~----~H~~~~l~~p~~~~~~~~~~~i~~Fl~~~~ 423 (454)
+...|+|+++|++|.++|.+.+ +.+++.+. +.++++++++ ||. .+ .+ .+++.+.|.+|+++..
T Consensus 290 ~I~~PvLvI~G~~D~~~p~~~~~~~~la~~ip----~a~l~~i~~a~~~~GH~-~~-e~-----P~~~~~~i~~FL~~~~ 358 (360)
T PRK06489 290 KIKAPVLAINSADDERNPPETGVMEAALKRVK----HGRLVLIPASPETRGHG-TT-GS-----AKFWKAYLAEFLAQVP 358 (360)
T ss_pred hCCCCEEEEecCCCcccChhhHHHHHHHHhCc----CCeEEEECCCCCCCCcc-cc-cC-----HHHHHHHHHHHHHhcc
Confidence 4567999999999999998876 67777765 5789999996 997 33 33 4889999999998764
No 60
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=99.48 E-value=2.1e-12 Score=134.84 Aligned_cols=64 Identities=20% Similarity=0.348 Sum_probs=53.2
Q ss_pred CCCCCEEEEEeCCCCCCChHHHHHHHHHHHHcCCCEEEEEeCCCCccccccCCCCCCcHHHHHHHHHHHHHhc
Q 012898 350 SLLPPIILFHGTADYSIPADASKNFANTLQRVGVRAESILYEGKTHTDLFLQDPMRGGKDDMFEDIVAIIHAD 422 (454)
Q Consensus 350 ~~~pPvLiihGe~D~~Vp~~~s~~l~~~l~~~g~~vel~~~~g~~H~~~~l~~p~~~~~~~~~~~i~~Fl~~~ 422 (454)
+...|+|++||++|.++|.+.++.+++.+. ++++++++++||...+...| +++.+.+.+|....
T Consensus 416 ~I~vPtLII~Ge~D~ivP~~~~~~la~~iP----~a~l~vI~~aGH~~~v~e~p-----~~fa~~L~~F~~~~ 479 (481)
T PLN03087 416 QLKCDVAIFHGGDDELIPVECSYAVKAKVP----RARVKVIDDKDHITIVVGRQ-----KEFARELEEIWRRS 479 (481)
T ss_pred hCCCCEEEEEECCCCCCCHHHHHHHHHhCC----CCEEEEeCCCCCcchhhcCH-----HHHHHHHHHHhhcc
Confidence 356799999999999999999999988876 58999999999984433433 89999999998654
No 61
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=99.47 E-value=1e-12 Score=132.06 Aligned_cols=63 Identities=22% Similarity=0.410 Sum_probs=51.0
Q ss_pred CCCEEEEEeCCCCCCChHHHHHHHHHHHHcCCCEEEEEeCCCCccccccCCCCCCcHHHHHHHHHHHHHh
Q 012898 352 LPPIILFHGTADYSIPADASKNFANTLQRVGVRAESILYEGKTHTDLFLQDPMRGGKDDMFEDIVAIIHA 421 (454)
Q Consensus 352 ~pPvLiihGe~D~~Vp~~~s~~l~~~l~~~g~~vel~~~~g~~H~~~~l~~p~~~~~~~~~~~i~~Fl~~ 421 (454)
..|+|++||++|.+++.+.++.+++++.. .++++++|++++|. ++.. + ..+++++.+.+||++
T Consensus 270 ~~P~Lii~G~~D~vv~~~~~~~~~~~~~~--~~~~l~~~~g~~H~-i~~E-~---~~~~v~~~i~~wL~~ 332 (332)
T TIGR01607 270 DIPILFIHSKGDCVCSYEGTVSFYNKLSI--SNKELHTLEDMDHV-ITIE-P---GNEEVLKKIIEWISN 332 (332)
T ss_pred CCCEEEEEeCCCCccCHHHHHHHHHhccC--CCcEEEEECCCCCC-CccC-C---CHHHHHHHHHHHhhC
Confidence 46999999999999999999998887643 35788999999998 3322 2 358899999999863
No 62
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=99.46 E-value=3e-12 Score=125.20 Aligned_cols=110 Identities=20% Similarity=0.212 Sum_probs=76.1
Q ss_pred ceeccCCC-CeeEEEEeeCCCCCCCcEEEEEcCCC-ccCCcccchhHHHHHHHhCCcEEEEEecCCCCCCC-----hhHH
Q 012898 180 GIVYGDQP-RNRLDLYFPKSSDGPKPVVAFITGGA-WIIGYKAWGSLLGQQLSERDIIVACIDYRNFPQGT-----IKDM 252 (454)
Q Consensus 180 ~v~y~~~~-~~~l~vy~P~~~~~~~Pvvv~~HGgg-~~~g~~~~~~~~~~~la~~G~~Vv~~dyr~~~~~~-----~~~~ 252 (454)
.+.+...+ .+...++.|.+. +.+.||++|||. +..|+...+..+++.|+++||.|+++|+|+++.+. +...
T Consensus 4 ~~~~~~~~~~l~g~~~~p~~~--~~~~vv~i~gg~~~~~g~~~~~~~la~~l~~~G~~v~~~Dl~G~G~S~~~~~~~~~~ 81 (274)
T TIGR03100 4 ALTFSCEGETLVGVLHIPGAS--HTTGVLIVVGGPQYRVGSHRQFVLLARRLAEAGFPVLRFDYRGMGDSEGENLGFEGI 81 (274)
T ss_pred eEEEEcCCcEEEEEEEcCCCC--CCCeEEEEeCCccccCCchhHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCCCHHHH
Confidence 34444333 244557777643 234566666653 44455555566889999999999999999998753 2345
Q ss_pred HHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCchHHHHHHHHHH
Q 012898 253 VKDASQGISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLLE 295 (454)
Q Consensus 253 ~~D~~~al~~l~~~~~~~g~d~~rI~l~G~S~GG~la~~~a~~ 295 (454)
..|+.++++++++... + .++|+++|||+||.+++.++..
T Consensus 82 ~~d~~~~~~~l~~~~~--g--~~~i~l~G~S~Gg~~a~~~a~~ 120 (274)
T TIGR03100 82 DADIAAAIDAFREAAP--H--LRRIVAWGLCDAASAALLYAPA 120 (274)
T ss_pred HHHHHHHHHHHHhhCC--C--CCcEEEEEECHHHHHHHHHhhh
Confidence 6788899998876421 2 2579999999999999888754
No 63
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=99.45 E-value=8.2e-14 Score=128.65 Aligned_cols=184 Identities=21% Similarity=0.271 Sum_probs=104.7
Q ss_pred EEEEcCCCccCCcccchhHHHHHHHhCCcEEEEEecCCCCCCChhH-----HHHHHHHHHHHHHHhhhhcCCCCCcEEEE
Q 012898 206 VAFITGGAWIIGYKAWGSLLGQQLSERDIIVACIDYRNFPQGTIKD-----MVKDASQGISFVCNNISEYGGDPDRIYLM 280 (454)
Q Consensus 206 vv~~HGgg~~~g~~~~~~~~~~~la~~G~~Vv~~dyr~~~~~~~~~-----~~~D~~~al~~l~~~~~~~g~d~~rI~l~ 280 (454)
|||+||.+ ++...+..+.+.|+ +||.|+++|+|+++.+..+. .++|....+..+.+ ..+. +++.++
T Consensus 1 vv~~hG~~---~~~~~~~~~~~~l~-~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~l~~~l~---~~~~--~~~~lv 71 (228)
T PF12697_consen 1 VVFLHGFG---GSSESWDPLAEALA-RGYRVIAFDLPGHGRSDPPPDYSPYSIEDYAEDLAELLD---ALGI--KKVILV 71 (228)
T ss_dssp EEEE-STT---TTGGGGHHHHHHHH-TTSEEEEEECTTSTTSSSHSSGSGGSHHHHHHHHHHHHH---HTTT--SSEEEE
T ss_pred eEEECCCC---CCHHHHHHHHHHHh-CCCEEEEEecCCccccccccccCCcchhhhhhhhhhccc---cccc--cccccc
Confidence 79999965 45567777888885 79999999999998876432 23333333322222 2223 689999
Q ss_pred EcCchHHHHHHHHHHHHHhhhCCCCCcccch-----------hhhhhhccccCC-----------CCCChhhhhcCCcc-
Q 012898 281 GQSAGAHIAACTLLEQAIKETGEGESTTWSV-----------SQIRAYFGLSGG-----------IMDGEESLRQYSPE- 337 (454)
Q Consensus 281 G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~-----------~~i~~~~~~~g~-----------~~~~~~~~~~~~p~- 337 (454)
|||+||.+++.++.+++....+......... ..+...+..... ..............
T Consensus 72 G~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (228)
T PF12697_consen 72 GHSMGGMIALRLAARYPDRVKGLVLLSPPPPLPDSPSRSFGPSFIRRLLAWRSRSLRRLASRFFYRWFDGDEPEDLIRSS 151 (228)
T ss_dssp EETHHHHHHHHHHHHSGGGEEEEEEESESSSHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccceeecccccccccccccccchhhhhhhhcccccccccccccccccccccccccccccc
Confidence 9999999999999886654332211100000 000100000000 00000000000000
Q ss_pred --c--------ccCCCccccccCCCCCEEEEEeCCCCCCChHHHHHHHHHHHHcCCCEEEEEeCCCCccccccCCC
Q 012898 338 --V--------LVQDPNTRHAVSLLPPIILFHGTADYSIPADASKNFANTLQRVGVRAESILYEGKTHTDLFLQDP 403 (454)
Q Consensus 338 --~--------~~~~~~~~~~~~~~pPvLiihGe~D~~Vp~~~s~~l~~~l~~~g~~vel~~~~g~~H~~~~l~~p 403 (454)
. ...............|+++++|++|.+++.+..+.+.+.+. +++++++++++|. .++..|
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~pvl~i~g~~D~~~~~~~~~~~~~~~~----~~~~~~~~~~gH~-~~~~~p 222 (228)
T PF12697_consen 152 RRALAEYLRSNLWQADLSEALPRIKVPVLVIHGEDDPIVPPESAEELADKLP----NAELVVIPGAGHF-LFLEQP 222 (228)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHGSSSEEEEEEETTSSSSHHHHHHHHHHHST----TEEEEEETTSSST-HHHHSH
T ss_pred ccccccccccccccccccccccccCCCeEEeecCCCCCCCHHHHHHHHHHCC----CCEEEEECCCCCc-cHHHCH
Confidence 0 00000012233446799999999999999777777776654 6899999999998 554444
No 64
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=99.45 E-value=2.7e-12 Score=122.50 Aligned_cols=190 Identities=22% Similarity=0.275 Sum_probs=125.5
Q ss_pred eeEEEEeeCCCCCCCcEEEEEcCCCccCCcccchhHHHHHHHhCCcEEEEEecCCCCCCChhHHHHHHHHHHHHHHHhhh
Q 012898 189 NRLDLYFPKSSDGPKPVVAFITGGAWIIGYKAWGSLLGQQLSERDIIVACIDYRNFPQGTIKDMVKDASQGISFVCNNIS 268 (454)
Q Consensus 189 ~~l~vy~P~~~~~~~Pvvv~~HGgg~~~g~~~~~~~~~~~la~~G~~Vv~~dyr~~~~~~~~~~~~D~~~al~~l~~~~~ 268 (454)
..+.||.|.. .+.+|||||+||-. -...+|..+.+.+|+.||+||.+|+...........+++..+.++|+.+.+.
T Consensus 4 ~~l~v~~P~~-~g~yPVv~f~~G~~---~~~s~Ys~ll~hvAShGyIVV~~d~~~~~~~~~~~~~~~~~~vi~Wl~~~L~ 79 (259)
T PF12740_consen 4 KPLLVYYPSS-AGTYPVVLFLHGFL---LINSWYSQLLEHVASHGYIVVAPDLYSIGGPDDTDEVASAAEVIDWLAKGLE 79 (259)
T ss_pred CCeEEEecCC-CCCcCEEEEeCCcC---CCHHHHHHHHHHHHhCceEEEEecccccCCCCcchhHHHHHHHHHHHHhcch
Confidence 3588999986 56799999999943 4455688999999999999999995443334445567888899999988765
Q ss_pred hc-----CCCCCcEEEEEcCchHHHHHHHHHHHHHhhhCCCCCcccchhhhhhhccccCCCCCChhhhhcCCcccccCCC
Q 012898 269 EY-----GGDPDRIYLMGQSAGAHIAACTLLEQAIKETGEGESTTWSVSQIRAYFGLSGGIMDGEESLRQYSPEVLVQDP 343 (454)
Q Consensus 269 ~~-----g~d~~rI~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~~~~~p~~~~~~~ 343 (454)
.. ..|-+||+|+|||.||-+|..+++.+..... ...+++.+.+... ++.....+..|..+...
T Consensus 80 ~~l~~~v~~D~s~l~l~GHSrGGk~Af~~al~~~~~~~---------~~~~~ali~lDPV--dG~~~~~~~~P~v~~~~- 147 (259)
T PF12740_consen 80 SKLPLGVKPDFSKLALAGHSRGGKVAFAMALGNASSSL---------DLRFSALILLDPV--DGMSKGSQTEPPVLTYT- 147 (259)
T ss_pred hhccccccccccceEEeeeCCCCHHHHHHHhhhccccc---------ccceeEEEEeccc--cccccccCCCCccccCc-
Confidence 43 3588899999999999999998887522111 1234455554431 11111122222211110
Q ss_pred ccccccCCCCCEEEEEeCCCCC---------CCh-HHHHHHHHHHHHcCCCEEEEEeCCCCccccc
Q 012898 344 NTRHAVSLLPPIILFHGTADYS---------IPA-DASKNFANTLQRVGVRAESILYEGKTHTDLF 399 (454)
Q Consensus 344 ~~~~~~~~~pPvLiihGe~D~~---------Vp~-~~s~~l~~~l~~~g~~vel~~~~g~~H~~~~ 399 (454)
....+...|++++-...+.. .|. .+-++|++.++. +.-..+..+.||.++.
T Consensus 148 --p~s~~~~~P~lviGtGLg~~~~~~~~~~CaP~g~n~~~Ff~~~~~---p~~~~v~~~~GH~d~L 208 (259)
T PF12740_consen 148 --PQSFDFSMPALVIGTGLGGEPRNPLFPPCAPAGVNYREFFDECKP---PSWHFVAKDYGHMDFL 208 (259)
T ss_pred --ccccCCCCCeEEEecccCcccccccCCCCCCCCCCHHHHHHhcCC---CEEEEEeCCCCchHhh
Confidence 11222335898887666642 222 356788887753 6777788999999554
No 65
>PRK07581 hypothetical protein; Validated
Probab=99.43 E-value=3.3e-12 Score=128.53 Aligned_cols=63 Identities=16% Similarity=0.057 Sum_probs=50.8
Q ss_pred CCCCCEEEEEeCCCCCCChHHHHHHHHHHHHcCCCEEEEEeCC-CCccccccCCCCCCcHHHHHHHHHHHHHhc
Q 012898 350 SLLPPIILFHGTADYSIPADASKNFANTLQRVGVRAESILYEG-KTHTDLFLQDPMRGGKDDMFEDIVAIIHAD 422 (454)
Q Consensus 350 ~~~pPvLiihGe~D~~Vp~~~s~~l~~~l~~~g~~vel~~~~g-~~H~~~~l~~p~~~~~~~~~~~i~~Fl~~~ 422 (454)
+...|+|+++|++|..+|.+.++.+++.+. +.+++++++ +||. .++..| +++...|.+|+++-
T Consensus 273 ~I~~PtLvI~G~~D~~~p~~~~~~l~~~ip----~a~l~~i~~~~GH~-~~~~~~-----~~~~~~~~~~~~~~ 336 (339)
T PRK07581 273 SITAKTFVMPISTDLYFPPEDCEAEAALIP----NAELRPIESIWGHL-AGFGQN-----PADIAFIDAALKEL 336 (339)
T ss_pred cCCCCEEEEEeCCCCCCCHHHHHHHHHhCC----CCeEEEeCCCCCcc-ccccCc-----HHHHHHHHHHHHHH
Confidence 456799999999999999999988888775 478999999 8997 343333 68888888888764
No 66
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=99.43 E-value=2.7e-12 Score=122.03 Aligned_cols=87 Identities=18% Similarity=0.188 Sum_probs=64.9
Q ss_pred CcEEEEEcCCCccCCcccchhHHHHHHHhCCcEEEEEecCCCCCCChhHHHHHHHHHHHHHHHhhhhcCCCCCcEEEEEc
Q 012898 203 KPVVAFITGGAWIIGYKAWGSLLGQQLSERDIIVACIDYRNFPQGTIKDMVKDASQGISFVCNNISEYGGDPDRIYLMGQ 282 (454)
Q Consensus 203 ~Pvvv~~HGgg~~~g~~~~~~~~~~~la~~G~~Vv~~dyr~~~~~~~~~~~~D~~~al~~l~~~~~~~g~d~~rI~l~G~ 282 (454)
.|+|||+||.+ ++...|..+...| .+|.|+++|+||++.+..+.. .+.....+++.+.++..+. +++.++||
T Consensus 2 ~p~vvllHG~~---~~~~~w~~~~~~l--~~~~vi~~D~~G~G~S~~~~~-~~~~~~~~~l~~~l~~~~~--~~~~lvG~ 73 (242)
T PRK11126 2 LPWLVFLHGLL---GSGQDWQPVGEAL--PDYPRLYIDLPGHGGSAAISV-DGFADVSRLLSQTLQSYNI--LPYWLVGY 73 (242)
T ss_pred CCEEEEECCCC---CChHHHHHHHHHc--CCCCEEEecCCCCCCCCCccc-cCHHHHHHHHHHHHHHcCC--CCeEEEEE
Confidence 47899999954 3444556666766 379999999999988765432 2555556666666665543 58999999
Q ss_pred CchHHHHHHHHHHHH
Q 012898 283 SAGAHIAACTLLEQA 297 (454)
Q Consensus 283 S~GG~la~~~a~~~~ 297 (454)
|+||.+++.++.+++
T Consensus 74 S~Gg~va~~~a~~~~ 88 (242)
T PRK11126 74 SLGGRIAMYYACQGL 88 (242)
T ss_pred CHHHHHHHHHHHhCC
Confidence 999999999998864
No 67
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=99.43 E-value=2.5e-12 Score=128.17 Aligned_cols=223 Identities=16% Similarity=0.125 Sum_probs=126.7
Q ss_pred eeceeccCCCCe--eEEEEeeCCCCCCCcEEEEEcCCCccCCcccchhHHHHHHHhCCcEEEEEecCCCCCCC-------
Q 012898 178 RRGIVYGDQPRN--RLDLYFPKSSDGPKPVVAFITGGAWIIGYKAWGSLLGQQLSERDIIVACIDYRNFPQGT------- 248 (454)
Q Consensus 178 ~~~v~y~~~~~~--~l~vy~P~~~~~~~Pvvv~~HGgg~~~g~~~~~~~~~~~la~~G~~Vv~~dyr~~~~~~------- 248 (454)
..++.|.+.++. ...+++|++..++.|+||.+||.|.. ...+. ....++..|++|+.+|.|+.+...
T Consensus 56 vy~v~f~s~~g~~V~g~l~~P~~~~~~~Pavv~~hGyg~~---~~~~~-~~~~~a~~G~~vl~~d~rGqg~~~~d~~~~~ 131 (320)
T PF05448_consen 56 VYDVSFESFDGSRVYGWLYRPKNAKGKLPAVVQFHGYGGR---SGDPF-DLLPWAAAGYAVLAMDVRGQGGRSPDYRGSS 131 (320)
T ss_dssp EEEEEEEEGGGEEEEEEEEEES-SSSSEEEEEEE--TT-----GGGHH-HHHHHHHTT-EEEEE--TTTSSSS-B-SSBS
T ss_pred EEEEEEEccCCCEEEEEEEecCCCCCCcCEEEEecCCCCC---CCCcc-cccccccCCeEEEEecCCCCCCCCCCccccC
Confidence 346677655544 56688898667899999999996532 22221 234578999999999999855110
Q ss_pred --------------------hhHHHHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCchHHHHHHHHHHHHHhhhCCCCCcc
Q 012898 249 --------------------IKDMVKDASQGISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLLEQAIKETGEGESTT 308 (454)
Q Consensus 249 --------------------~~~~~~D~~~al~~l~~~~~~~g~d~~rI~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~ 308 (454)
+...+.|+..+++++.+.. .+|++||++.|.|+||.+++.++.-.+...... ....
T Consensus 132 ~~~~~g~~~~g~~~~~e~~yyr~~~~D~~ravd~l~slp---evD~~rI~v~G~SqGG~lal~~aaLd~rv~~~~-~~vP 207 (320)
T PF05448_consen 132 GGTLKGHITRGIDDNPEDYYYRRVYLDAVRAVDFLRSLP---EVDGKRIGVTGGSQGGGLALAAAALDPRVKAAA-ADVP 207 (320)
T ss_dssp SS-SSSSTTTTTTS-TTT-HHHHHHHHHHHHHHHHHTST---TEEEEEEEEEEETHHHHHHHHHHHHSST-SEEE-EESE
T ss_pred CCCCccHHhcCccCchHHHHHHHHHHHHHHHHHHHHhCC---CcCcceEEEEeecCchHHHHHHHHhCccccEEE-ecCC
Confidence 1124689999999998864 378999999999999999998887532211110 0000
Q ss_pred cchhhhhhhccccC--CCCCC-hhhhhcCC--ccc----c---cCCCccccccCCCCCEEEEEeCCCCCCChHHHHHHHH
Q 012898 309 WSVSQIRAYFGLSG--GIMDG-EESLRQYS--PEV----L---VQDPNTRHAVSLLPPIILFHGTADYSIPADASKNFAN 376 (454)
Q Consensus 309 ~~~~~i~~~~~~~g--~~~~~-~~~~~~~~--p~~----~---~~~~~~~~~~~~~pPvLiihGe~D~~Vp~~~s~~l~~ 376 (454)
....+...+.+.. ..+.. ...+.... +.. + .--+..+......+|+++..|-.|.++|+......++
T Consensus 208 -~l~d~~~~~~~~~~~~~y~~~~~~~~~~d~~~~~~~~v~~~L~Y~D~~nfA~ri~~pvl~~~gl~D~~cPP~t~fA~yN 286 (320)
T PF05448_consen 208 -FLCDFRRALELRADEGPYPEIRRYFRWRDPHHEREPEVFETLSYFDAVNFARRIKCPVLFSVGLQDPVCPPSTQFAAYN 286 (320)
T ss_dssp -SSSSHHHHHHHT--STTTHHHHHHHHHHSCTHCHHHHHHHHHHTT-HHHHGGG--SEEEEEEETT-SSS-HHHHHHHHC
T ss_pred -CccchhhhhhcCCccccHHHHHHHHhccCCCcccHHHHHHHHhhhhHHHHHHHcCCCEEEEEecCCCCCCchhHHHHHh
Confidence 0111111111110 00100 01111000 000 0 0001112344556799999999999999999999999
Q ss_pred HHHHcCCCEEEEEeCCCCccccccCCCCCCcHHHH-HHHHHHHHHhc
Q 012898 377 TLQRVGVRAESILYEGKTHTDLFLQDPMRGGKDDM-FEDIVAIIHAD 422 (454)
Q Consensus 377 ~l~~~g~~vel~~~~g~~H~~~~l~~p~~~~~~~~-~~~i~~Fl~~~ 422 (454)
++.. ++++.+||..+|... .+. .++.++||.++
T Consensus 287 ~i~~---~K~l~vyp~~~He~~----------~~~~~~~~~~~l~~~ 320 (320)
T PF05448_consen 287 AIPG---PKELVVYPEYGHEYG----------PEFQEDKQLNFLKEH 320 (320)
T ss_dssp C--S---SEEEEEETT--SSTT----------HHHHHHHHHHHHHH-
T ss_pred ccCC---CeeEEeccCcCCCch----------hhHHHHHHHHHHhcC
Confidence 9874 699999999999721 355 78889998864
No 68
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=99.43 E-value=3.6e-12 Score=129.01 Aligned_cols=230 Identities=17% Similarity=0.257 Sum_probs=133.2
Q ss_pred ceeccCCCCeeEEEEeeCCCCCCCcEEEEEcCC---CccCCcccchhHHHHHHHhCCcEEEEEecCCCCCCC----hhHH
Q 012898 180 GIVYGDQPRNRLDLYFPKSSDGPKPVVAFITGG---AWIIGYKAWGSLLGQQLSERDIIVACIDYRNFPQGT----IKDM 252 (454)
Q Consensus 180 ~v~y~~~~~~~l~vy~P~~~~~~~Pvvv~~HGg---g~~~g~~~~~~~~~~~la~~G~~Vv~~dyr~~~~~~----~~~~ 252 (454)
++++ ..+...+..|.|.......+.||++||- ++.. +......+++.|+++||.|+++|+|+.+... +.+.
T Consensus 40 ~~v~-~~~~~~l~~~~~~~~~~~~~pvl~v~~~~~~~~~~-d~~~~~~~~~~L~~~G~~V~~~D~~g~g~s~~~~~~~d~ 117 (350)
T TIGR01836 40 EVVY-REDKVVLYRYTPVKDNTHKTPLLIVYALVNRPYML-DLQEDRSLVRGLLERGQDVYLIDWGYPDRADRYLTLDDY 117 (350)
T ss_pred ceEE-EcCcEEEEEecCCCCcCCCCcEEEeccccccceec-cCCCCchHHHHHHHCCCeEEEEeCCCCCHHHhcCCHHHH
Confidence 4444 4455667778776433333448889982 1111 1122356899999999999999999876432 2233
Q ss_pred H-HHHHHHHHHHHHhhhhcCCCCCcEEEEEcCchHHHHHHHHHHHHHhhhCC---CCCcccc-hhh----------hhhh
Q 012898 253 V-KDASQGISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLLEQAIKETGE---GESTTWS-VSQ----------IRAY 317 (454)
Q Consensus 253 ~-~D~~~al~~l~~~~~~~g~d~~rI~l~G~S~GG~la~~~a~~~~~~~~~~---~~~~~~~-~~~----------i~~~ 317 (454)
. .|+.++++++.+.. +.++|.++|||+||.+++.++..++.+.... ....... ... +...
T Consensus 118 ~~~~~~~~v~~l~~~~-----~~~~i~lvGhS~GG~i~~~~~~~~~~~v~~lv~~~~p~~~~~~~~~~~~~~~~~~~~~~ 192 (350)
T TIGR01836 118 INGYIDKCVDYICRTS-----KLDQISLLGICQGGTFSLCYAALYPDKIKNLVTMVTPVDFETPGNMLSNWARHVDIDLA 192 (350)
T ss_pred HHHHHHHHHHHHHHHh-----CCCcccEEEECHHHHHHHHHHHhCchheeeEEEeccccccCCCCchhhhhccccCHHHH
Confidence 3 34777888887753 2358999999999999999887665432111 0000000 000 0000
Q ss_pred ccccCC----------------------------CCCChhhhh------cC---Cccc------------ccCCCc----
Q 012898 318 FGLSGG----------------------------IMDGEESLR------QY---SPEV------------LVQDPN---- 344 (454)
Q Consensus 318 ~~~~g~----------------------------~~~~~~~~~------~~---~p~~------------~~~~~~---- 344 (454)
....+. .....+... .+ .+.. +..+..
T Consensus 193 ~~~~~~~p~~~~~~~f~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~d~~~~~~~~~~~~~~~~~~~n~l~~g~ 272 (350)
T TIGR01836 193 VDTMGNIPGELLNLTFLMLKPFSLGYQKYVNLVDILEDERKVENFLRMEKWIFDSPDQAGEAFRQFVKDFYQQNGLINGE 272 (350)
T ss_pred HHhcCCCCHHHHHHHHHhcCcchhhhHHHHHHHHhcCChHHHHHHHHHHHHhcCCcCccHHHHHHHHHHHHhcCcccCCe
Confidence 000000 000000000 00 0000 000000
Q ss_pred ------cccccCCCCCEEEEEeCCCCCCChHHHHHHHHHHHHcCCCEEEEEeCCCCccccccCCCCCCcHHHHHHHHHHH
Q 012898 345 ------TRHAVSLLPPIILFHGTADYSIPADASKNFANTLQRVGVRAESILYEGKTHTDLFLQDPMRGGKDDMFEDIVAI 418 (454)
Q Consensus 345 ------~~~~~~~~pPvLiihGe~D~~Vp~~~s~~l~~~l~~~g~~vel~~~~g~~H~~~~l~~p~~~~~~~~~~~i~~F 418 (454)
..+..+...|+++++|++|.++|.+.++.+++.+.. .++++++++ +||..++... +..++++..+.+|
T Consensus 273 ~~~~~~~~~l~~i~~Pvliv~G~~D~i~~~~~~~~~~~~~~~--~~~~~~~~~-~gH~~~~~~~---~~~~~v~~~i~~w 346 (350)
T TIGR01836 273 VEIGGRKVDLKNIKMPILNIYAERDHLVPPDASKALNDLVSS--EDYTELSFP-GGHIGIYVSG---KAQKEVPPAIGKW 346 (350)
T ss_pred eEECCEEccHHhCCCCeEEEecCCCCcCCHHHHHHHHHHcCC--CCeEEEEcC-CCCEEEEECc---hhHhhhhHHHHHH
Confidence 012234567999999999999999999999998753 467888888 4887555432 2457899999999
Q ss_pred HHhc
Q 012898 419 IHAD 422 (454)
Q Consensus 419 l~~~ 422 (454)
|.++
T Consensus 347 l~~~ 350 (350)
T TIGR01836 347 LQAR 350 (350)
T ss_pred HHhC
Confidence 9763
No 69
>PRK03204 haloalkane dehalogenase; Provisional
Probab=99.42 E-value=2.7e-12 Score=126.22 Aligned_cols=198 Identities=16% Similarity=0.207 Sum_probs=114.2
Q ss_pred CcEEEEEcCCCccCCcccchhHHHHHHHhCCcEEEEEecCCCCCCChhH----HHHHHHHHHHHHHHhhhhcCCCCCcEE
Q 012898 203 KPVVAFITGGAWIIGYKAWGSLLGQQLSERDIIVACIDYRNFPQGTIKD----MVKDASQGISFVCNNISEYGGDPDRIY 278 (454)
Q Consensus 203 ~Pvvv~~HGgg~~~g~~~~~~~~~~~la~~G~~Vv~~dyr~~~~~~~~~----~~~D~~~al~~l~~~~~~~g~d~~rI~ 278 (454)
.|.|||+||.+ .+...+..+...|.+ +|.|+++|+++++.+..+. .+.+....+..+.+. ++ .+++.
T Consensus 34 ~~~iv~lHG~~---~~~~~~~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~---~~--~~~~~ 104 (286)
T PRK03204 34 GPPILLCHGNP---TWSFLYRDIIVALRD-RFRCVAPDYLGFGLSERPSGFGYQIDEHARVIGEFVDH---LG--LDRYL 104 (286)
T ss_pred CCEEEEECCCC---ccHHHHHHHHHHHhC-CcEEEEECCCCCCCCCCCCccccCHHHHHHHHHHHHHH---hC--CCCEE
Confidence 47899999954 233344556667754 5999999999998775432 345666666665554 23 35799
Q ss_pred EEEcCchHHHHHHHHHHHHHhhhCCCC--Ccccchhh-----hhhhcc--------------cc-----CC-CCCChhhh
Q 012898 279 LMGQSAGAHIAACTLLEQAIKETGEGE--STTWSVSQ-----IRAYFG--------------LS-----GG-IMDGEESL 331 (454)
Q Consensus 279 l~G~S~GG~la~~~a~~~~~~~~~~~~--~~~~~~~~-----i~~~~~--------------~~-----g~-~~~~~~~~ 331 (454)
++|||+||.++..++..++.+...... ...+.... +..... .. .. ........
T Consensus 105 lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (286)
T PRK03204 105 SMGQDWGGPISMAVAVERADRVRGVVLGNTWFWPADTLAMKAFSRVMSSPPVQYAILRRNFFVERLIPAGTEHRPSSAVM 184 (286)
T ss_pred EEEECccHHHHHHHHHhChhheeEEEEECccccCCCchhHHHHHHHhccccchhhhhhhhHHHHHhccccccCCCCHHHH
Confidence 999999999999998876655333211 00000000 000000 00 00 00000000
Q ss_pred hcC---Cc--c----------cccCCC-ccccc----c--CCCCCEEEEEeCCCCCCChH-HHHHHHHHHHHcCCCEEEE
Q 012898 332 RQY---SP--E----------VLVQDP-NTRHA----V--SLLPPIILFHGTADYSIPAD-ASKNFANTLQRVGVRAESI 388 (454)
Q Consensus 332 ~~~---~p--~----------~~~~~~-~~~~~----~--~~~pPvLiihGe~D~~Vp~~-~s~~l~~~l~~~g~~vel~ 388 (454)
..+ .. . ...... ..... . ....|+++++|++|.+++.. ..+.+.+.+. +.+++
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PtliI~G~~D~~~~~~~~~~~~~~~ip----~~~~~ 260 (286)
T PRK03204 185 AHYRAVQPNAAARRGVAEMPKQILAARPLLARLAREVPATLGTKPTLLVWGMKDVAFRPKTILPRLRATFP----DHVLV 260 (286)
T ss_pred HHhcCCCCCHHHHHHHHHHHHhcchhhHHHHHhhhhhhhhcCCCCeEEEecCCCcccCcHHHHHHHHHhcC----CCeEE
Confidence 000 00 0 000000 00000 0 11579999999999987654 4566666665 57999
Q ss_pred EeCCCCccccccCCCCCCcHHHHHHHHHHHH
Q 012898 389 LYEGKTHTDLFLQDPMRGGKDDMFEDIVAII 419 (454)
Q Consensus 389 ~~~g~~H~~~~l~~p~~~~~~~~~~~i~~Fl 419 (454)
+++++||. ..+..| +++.+.|.+|+
T Consensus 261 ~i~~aGH~-~~~e~P-----e~~~~~i~~~~ 285 (286)
T PRK03204 261 ELPNAKHF-IQEDAP-----DRIAAAIIERF 285 (286)
T ss_pred EcCCCccc-ccccCH-----HHHHHHHHHhc
Confidence 99999997 555544 88899999887
No 70
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=99.41 E-value=8.8e-12 Score=111.90 Aligned_cols=180 Identities=17% Similarity=0.240 Sum_probs=123.4
Q ss_pred EEeeCCCCCCCcEEEEEcCCCccCCcccc--hhHHHHHHHhCCcEEEEEecCCCCCCC--h---hHHHHHHHHHHHHHHH
Q 012898 193 LYFPKSSDGPKPVVAFITGGAWIIGYKAW--GSLLGQQLSERDIIVACIDYRNFPQGT--I---KDMVKDASQGISFVCN 265 (454)
Q Consensus 193 vy~P~~~~~~~Pvvv~~HGgg~~~g~~~~--~~~~~~~la~~G~~Vv~~dyr~~~~~~--~---~~~~~D~~~al~~l~~ 265 (454)
.|.|.+ .+..|+.|..|--.-..|+..+ ...++..|.++||.++.+|||+-|.+. + -..++|+.++++|+++
T Consensus 19 ~~~~~~-~~~~~iAli~HPHPl~gGtm~nkvv~~la~~l~~~G~atlRfNfRgVG~S~G~fD~GiGE~~Da~aaldW~~~ 97 (210)
T COG2945 19 RYEPAK-TPAAPIALICHPHPLFGGTMNNKVVQTLARALVKRGFATLRFNFRGVGRSQGEFDNGIGELEDAAAALDWLQA 97 (210)
T ss_pred ccCCCC-CCCCceEEecCCCccccCccCCHHHHHHHHHHHhCCceEEeecccccccccCcccCCcchHHHHHHHHHHHHh
Confidence 344444 5678999999976655566553 345778888999999999999865443 2 2458999999999998
Q ss_pred hhhhcCCCCCcEEEEEcCchHHHHHHHHHHHHHhhhCCCCCcccchhhhhhhccccCCCCCChhhhhcCCcccccCCCcc
Q 012898 266 NISEYGGDPDRIYLMGQSAGAHIAACTLLEQAIKETGEGESTTWSVSQIRAYFGLSGGIMDGEESLRQYSPEVLVQDPNT 345 (454)
Q Consensus 266 ~~~~~g~d~~rI~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~~~~~p~~~~~~~~~ 345 (454)
.-. +..-..++|+|.|+++++.++.+.+.. ..++.+...+. . ++-.....
T Consensus 98 ~hp----~s~~~~l~GfSFGa~Ia~~la~r~~e~---------------~~~is~~p~~~--~-----~dfs~l~P---- 147 (210)
T COG2945 98 RHP----DSASCWLAGFSFGAYIAMQLAMRRPEI---------------LVFISILPPIN--A-----YDFSFLAP---- 147 (210)
T ss_pred hCC----CchhhhhcccchHHHHHHHHHHhcccc---------------cceeeccCCCC--c-----hhhhhccC----
Confidence 732 222347899999999999999875322 11111111100 0 00000111
Q ss_pred ccccCCCCCEEEEEeCCCCCCChHHHHHHHHHHHHcCCCEEEEEeCCCCccccccCCCCCCcHHHHHHHHHHHHH
Q 012898 346 RHAVSLLPPIILFHGTADYSIPADASKNFANTLQRVGVRAESILYEGKTHTDLFLQDPMRGGKDDMFEDIVAIIH 420 (454)
Q Consensus 346 ~~~~~~~pPvLiihGe~D~~Vp~~~s~~l~~~l~~~g~~vel~~~~g~~H~~~~l~~p~~~~~~~~~~~i~~Fl~ 420 (454)
.-.|.+++||+.|+++......++++. .+.++++.++++|. +.+....+.+.+.+|+.
T Consensus 148 -----~P~~~lvi~g~~Ddvv~l~~~l~~~~~-----~~~~~i~i~~a~HF-------F~gKl~~l~~~i~~~l~ 205 (210)
T COG2945 148 -----CPSPGLVIQGDADDVVDLVAVLKWQES-----IKITVITIPGADHF-------FHGKLIELRDTIADFLE 205 (210)
T ss_pred -----CCCCceeEecChhhhhcHHHHHHhhcC-----CCCceEEecCCCce-------ecccHHHHHHHHHHHhh
Confidence 113899999999999888777776654 47899999999997 23356788899999995
No 71
>PLN02578 hydrolase
Probab=99.40 E-value=4.4e-12 Score=128.60 Aligned_cols=197 Identities=12% Similarity=0.108 Sum_probs=113.0
Q ss_pred CcEEEEEcCCCccCCcccchhHHHHHHHhCCcEEEEEecCCCCCCChhHH---HHH-HHHHHHHHHHhhhhcCCCCCcEE
Q 012898 203 KPVVAFITGGAWIIGYKAWGSLLGQQLSERDIIVACIDYRNFPQGTIKDM---VKD-ASQGISFVCNNISEYGGDPDRIY 278 (454)
Q Consensus 203 ~Pvvv~~HGgg~~~g~~~~~~~~~~~la~~G~~Vv~~dyr~~~~~~~~~~---~~D-~~~al~~l~~~~~~~g~d~~rI~ 278 (454)
.|.||++||.+ ++...+......|++ +|.|+++|++|++.+..+.. ..+ ...+.+++.+. + .++++
T Consensus 86 g~~vvliHG~~---~~~~~w~~~~~~l~~-~~~v~~~D~~G~G~S~~~~~~~~~~~~a~~l~~~i~~~----~--~~~~~ 155 (354)
T PLN02578 86 GLPIVLIHGFG---ASAFHWRYNIPELAK-KYKVYALDLLGFGWSDKALIEYDAMVWRDQVADFVKEV----V--KEPAV 155 (354)
T ss_pred CCeEEEECCCC---CCHHHHHHHHHHHhc-CCEEEEECCCCCCCCCCcccccCHHHHHHHHHHHHHHh----c--cCCeE
Confidence 35689999943 344555666677765 59999999999987754321 111 22233333332 2 25899
Q ss_pred EEEcCchHHHHHHHHHHHHHhhhCCCCC---cccch-------------hhhh-----h---hcc---------ccCC--
Q 012898 279 LMGQSAGAHIAACTLLEQAIKETGEGES---TTWSV-------------SQIR-----A---YFG---------LSGG-- 323 (454)
Q Consensus 279 l~G~S~GG~la~~~a~~~~~~~~~~~~~---~~~~~-------------~~i~-----~---~~~---------~~g~-- 323 (454)
++|||+||.++..++.+++......... ..+.. .... . .+. ....
T Consensus 156 lvG~S~Gg~ia~~~A~~~p~~v~~lvLv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (354)
T PLN02578 156 LVGNSLGGFTALSTAVGYPELVAGVALLNSAGQFGSESREKEEAIVVEETVLTRFVVKPLKEWFQRVVLGFLFWQAKQPS 235 (354)
T ss_pred EEEECHHHHHHHHHHHhChHhcceEEEECCCccccccccccccccccccchhhHHHhHHHHHHHHHHHHHHHHHHhcCHH
Confidence 9999999999999999876653322110 00000 0000 0 000 0000
Q ss_pred --------CCCC----hhh-hh-----cCCccc----------cc---CCCcc-ccccCCCCCEEEEEeCCCCCCChHHH
Q 012898 324 --------IMDG----EES-LR-----QYSPEV----------LV---QDPNT-RHAVSLLPPIILFHGTADYSIPADAS 371 (454)
Q Consensus 324 --------~~~~----~~~-~~-----~~~p~~----------~~---~~~~~-~~~~~~~pPvLiihGe~D~~Vp~~~s 371 (454)
.... .+. .. ...+.. .. ..... ........|++++||++|..+|.+.+
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLiI~G~~D~~v~~~~~ 315 (354)
T PLN02578 236 RIESVLKSVYKDKSNVDDYLVESITEPAADPNAGEVYYRLMSRFLFNQSRYTLDSLLSKLSCPLLLLWGDLDPWVGPAKA 315 (354)
T ss_pred HHHHHHHHhcCCcccCCHHHHHHHHhcccCCchHHHHHHHHHHHhcCCCCCCHHHHhhcCCCCEEEEEeCCCCCCCHHHH
Confidence 0000 000 00 000000 00 00001 11234567999999999999999999
Q ss_pred HHHHHHHHHcCCCEEEEEeCCCCccccccCCCCCCcHHHHHHHHHHHHH
Q 012898 372 KNFANTLQRVGVRAESILYEGKTHTDLFLQDPMRGGKDDMFEDIVAIIH 420 (454)
Q Consensus 372 ~~l~~~l~~~g~~vel~~~~g~~H~~~~l~~p~~~~~~~~~~~i~~Fl~ 420 (454)
+++.+.+. +.+++++ ++||. .+.. ..+++.+.|.+|++
T Consensus 316 ~~l~~~~p----~a~l~~i-~~GH~-~~~e-----~p~~~~~~I~~fl~ 353 (354)
T PLN02578 316 EKIKAFYP----DTTLVNL-QAGHC-PHDE-----VPEQVNKALLEWLS 353 (354)
T ss_pred HHHHHhCC----CCEEEEe-CCCCC-cccc-----CHHHHHHHHHHHHh
Confidence 88888765 4677778 57997 4444 44899999999986
No 72
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=99.39 E-value=4.2e-11 Score=116.23 Aligned_cols=222 Identities=18% Similarity=0.195 Sum_probs=125.6
Q ss_pred CCCeeEEEEeeCCCCCCCcEEEEEcCCCccCC-cccchhHHHHHHHhCCcEEEEEecCCCCCCC-------hhHHHHHHH
Q 012898 186 QPRNRLDLYFPKSSDGPKPVVAFITGGAWIIG-YKAWGSLLGQQLSERDIIVACIDYRNFPQGT-------IKDMVKDAS 257 (454)
Q Consensus 186 ~~~~~l~vy~P~~~~~~~Pvvv~~HGgg~~~g-~~~~~~~~~~~la~~G~~Vv~~dyr~~~~~~-------~~~~~~D~~ 257 (454)
..+....+|.+....+++|+|||+||.+.... +...+..+++.|+++||.|+.+|||+++.+. +....+|+.
T Consensus 8 ~~g~~~~~~~~p~~~~~~~~VlllHG~g~~~~~~~~~~~~la~~La~~Gy~Vl~~Dl~G~G~S~g~~~~~~~~~~~~Dv~ 87 (266)
T TIGR03101 8 PHGFRFCLYHPPVAVGPRGVVIYLPPFAEEMNKSRRMVALQARAFAAGGFGVLQIDLYGCGDSAGDFAAARWDVWKEDVA 87 (266)
T ss_pred CCCcEEEEEecCCCCCCceEEEEECCCcccccchhHHHHHHHHHHHHCCCEEEEECCCCCCCCCCccccCCHHHHHHHHH
Confidence 33344455554443445789999999553222 2234456789999999999999999988653 334578888
Q ss_pred HHHHHHHHhhhhcCCCCCcEEEEEcCchHHHHHHHHHHHHHhhhCCC--CCcccchhhhhhhcc-------ccCCCCCCh
Q 012898 258 QGISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLLEQAIKETGEG--ESTTWSVSQIRAYFG-------LSGGIMDGE 328 (454)
Q Consensus 258 ~al~~l~~~~~~~g~d~~rI~l~G~S~GG~la~~~a~~~~~~~~~~~--~~~~~~~~~i~~~~~-------~~g~~~~~~ 328 (454)
.+++|+++. + .++|+|+|||+||.+++.++.+++....... .........+..+.. +.+......
T Consensus 88 ~ai~~L~~~----~--~~~v~LvG~SmGG~vAl~~A~~~p~~v~~lVL~~P~~~g~~~l~~~lrl~~~~~~~~~~~~~~~ 161 (266)
T TIGR03101 88 AAYRWLIEQ----G--HPPVTLWGLRLGALLALDAANPLAAKCNRLVLWQPVVSGKQQLQQFLRLRLVARRLGGESAEAS 161 (266)
T ss_pred HHHHHHHhc----C--CCCEEEEEECHHHHHHHHHHHhCccccceEEEeccccchHHHHHHHHHHHHHHHhccccccccc
Confidence 889988763 2 3589999999999999998877543322111 111111111111110 111100000
Q ss_pred hhhh-cC-------------Cccccc--CCCccccccCCCCCEEEEEeCCC-CCCChHHHHHHHHHHHHcCCCEEEEEeC
Q 012898 329 ESLR-QY-------------SPEVLV--QDPNTRHAVSLLPPIILFHGTAD-YSIPADASKNFANTLQRVGVRAESILYE 391 (454)
Q Consensus 329 ~~~~-~~-------------~p~~~~--~~~~~~~~~~~~pPvLiihGe~D-~~Vp~~~s~~l~~~l~~~g~~vel~~~~ 391 (454)
..+. .. .+.... ..-.+........+++++.-..+ .--+.....++.+++++.|+.++...++
T Consensus 162 ~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~v~~~~~~ 241 (266)
T TIGR03101 162 NSLRERLLAGEDVEIAGYELAPALASDLDQRQLAPAVPKNCPVHWFEVRPEEGATLSPVFSRLGEQWVQSGVEVTVDLVP 241 (266)
T ss_pred hhHHhhccCCCeEEEeceecCHHHHHHHHhcccCCCCCCCCceEEEEeccccCCCCCHHHHHHHHHHHHcCCeEeeeecC
Confidence 0000 00 000000 00001111111346777766432 2223567889999999999999999999
Q ss_pred CCCccccccCCCCCCcHHHHHHHHHH
Q 012898 392 GKTHTDLFLQDPMRGGKDDMFEDIVA 417 (454)
Q Consensus 392 g~~H~~~~l~~p~~~~~~~~~~~i~~ 417 (454)
|- . +.+.+......+.++...+
T Consensus 242 ~~--~--~~~~~~~~~~p~~~~~~~~ 263 (266)
T TIGR03101 242 GP--A--FWQTQEIEEAPELIARTTA 263 (266)
T ss_pred Cc--h--hhcchhhhHhHHHHHHHHh
Confidence 96 3 4455555555555555444
No 73
>PLN02872 triacylglycerol lipase
Probab=99.39 E-value=2.5e-11 Score=124.34 Aligned_cols=65 Identities=17% Similarity=0.293 Sum_probs=52.7
Q ss_pred CCEEEEEeCCCCCCChHHHHHHHHHHHHcCCCEEEEEeCCCCccccccCCCCCCcHHHHHHHHHHHHHhcC
Q 012898 353 PPIILFHGTADYSIPADASKNFANTLQRVGVRAESILYEGKTHTDLFLQDPMRGGKDDMFEDIVAIIHADD 423 (454)
Q Consensus 353 pPvLiihGe~D~~Vp~~~s~~l~~~l~~~g~~vel~~~~g~~H~~~~l~~p~~~~~~~~~~~i~~Fl~~~~ 423 (454)
.|+++++|++|.+++.+..+.+.+.+.. ..+++.+++.+|.+++.. .+..+++++.|++|+++..
T Consensus 326 ~Pv~i~~G~~D~lv~~~dv~~l~~~Lp~---~~~l~~l~~~gH~dfi~~---~eape~V~~~Il~fL~~~~ 390 (395)
T PLN02872 326 LPLWMGYGGTDGLADVTDVEHTLAELPS---KPELLYLENYGHIDFLLS---TSAKEDVYNHMIQFFRSLG 390 (395)
T ss_pred ccEEEEEcCCCCCCCHHHHHHHHHHCCC---ccEEEEcCCCCCHHHHhC---cchHHHHHHHHHHHHHHhh
Confidence 5999999999999999999999888763 357888999999855433 2345789999999998654
No 74
>COG4099 Predicted peptidase [General function prediction only]
Probab=99.38 E-value=2.6e-12 Score=121.98 Aligned_cols=173 Identities=21% Similarity=0.257 Sum_probs=108.0
Q ss_pred CCeeEEEEeeCC--CCCCC-cEEEEEcCCCccCCcccchh-----HHHHHHHhCCcEEEEEecCC-CCCCChhHHHHHHH
Q 012898 187 PRNRLDLYFPKS--SDGPK-PVVAFITGGAWIIGYKAWGS-----LLGQQLSERDIIVACIDYRN-FPQGTIKDMVKDAS 257 (454)
Q Consensus 187 ~~~~l~vy~P~~--~~~~~-Pvvv~~HGgg~~~g~~~~~~-----~~~~~la~~G~~Vv~~dyr~-~~~~~~~~~~~D~~ 257 (454)
..+..++|.|++ ++++. |+|||+||+|-......... .++-..-+.++-|+++.|.- +.... .....-..
T Consensus 172 neLkYrly~Pkdy~pdkky~PLvlfLHgagq~g~dn~~~l~sg~gaiawa~pedqcfVlAPQy~~if~d~e-~~t~~~l~ 250 (387)
T COG4099 172 NELKYRLYTPKDYAPDKKYYPLVLFLHGAGQGGSDNDKVLSSGIGAIAWAGPEDQCFVLAPQYNPIFADSE-EKTLLYLI 250 (387)
T ss_pred ceeeEEEecccccCCCCccccEEEEEecCCCCCchhhhhhhcCccceeeecccCceEEEcccccccccccc-cccchhHH
Confidence 346889999975 45565 99999999874322111000 00111111245555665532 11111 01111123
Q ss_pred HHHHHHH-HhhhhcCCCCCcEEEEEcCchHHHHHHHHHHHHHhhhCCCCCcccchhhhhhhccccCCCCCChhhhhcCCc
Q 012898 258 QGISFVC-NNISEYGGDPDRIYLMGQSAGAHIAACTLLEQAIKETGEGESTTWSVSQIRAYFGLSGGIMDGEESLRQYSP 336 (454)
Q Consensus 258 ~al~~l~-~~~~~~g~d~~rI~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~~~~~p 336 (454)
..++.+. ...+.+++|.+||+++|.|+||..++.++.+.+ .-+.+.+.++|+ ..........
T Consensus 251 ~~idli~~vlas~ynID~sRIYviGlSrG~~gt~al~~kfP--------------dfFAaa~~iaG~-~d~v~lv~~l-- 313 (387)
T COG4099 251 EKIDLILEVLASTYNIDRSRIYVIGLSRGGFGTWALAEKFP--------------DFFAAAVPIAGG-GDRVYLVRTL-- 313 (387)
T ss_pred HHHHHHHHHHhhccCcccceEEEEeecCcchhhHHHHHhCc--------------hhhheeeeecCC-Cchhhhhhhh--
Confidence 3455555 334578999999999999999999999988753 445566677763 1110001100
Q ss_pred ccccCCCccccccCCCCCEEEEEeCCCCCCChHHHHHHHHHHHHcCCCEEEEEeC
Q 012898 337 EVLVQDPNTRHAVSLLPPIILFHGTADYSIPADASKNFANTLQRVGVRAESILYE 391 (454)
Q Consensus 337 ~~~~~~~~~~~~~~~~pPvLiihGe~D~~Vp~~~s~~l~~~l~~~g~~vel~~~~ 391 (454)
...|++++|+.+|.++|.+.++-+++.+++.+.++.+..|.
T Consensus 314 --------------k~~piWvfhs~dDkv~Pv~nSrv~y~~lk~~~~kv~Ytaf~ 354 (387)
T COG4099 314 --------------KKAPIWVFHSSDDKVIPVSNSRVLYERLKALDRKVNYTAFL 354 (387)
T ss_pred --------------ccCceEEEEecCCCccccCcceeehHHHHhhccccchhhhh
Confidence 12499999999999999999999999999988877776665
No 75
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=99.38 E-value=1.4e-11 Score=122.34 Aligned_cols=88 Identities=16% Similarity=0.112 Sum_probs=59.0
Q ss_pred CcEEEEEcCCCccCCcccchhHHHHHHHhCCcEEEEEecCCCCCCChhH-----HHHHHHHHHHHHHHhhhhcCCCCCcE
Q 012898 203 KPVVAFITGGAWIIGYKAWGSLLGQQLSERDIIVACIDYRNFPQGTIKD-----MVKDASQGISFVCNNISEYGGDPDRI 277 (454)
Q Consensus 203 ~Pvvv~~HGgg~~~g~~~~~~~~~~~la~~G~~Vv~~dyr~~~~~~~~~-----~~~D~~~al~~l~~~~~~~g~d~~rI 277 (454)
.+.||++||++.. ... ..+...+...+|.|+++|+|++|.+..+. ...|..+.+..+.++ ++ .+++
T Consensus 27 ~~~lvllHG~~~~---~~~-~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~l~~~---l~--~~~~ 97 (306)
T TIGR01249 27 GKPVVFLHGGPGS---GTD-PGCRRFFDPETYRIVLFDQRGCGKSTPHACLEENTTWDLVADIEKLREK---LG--IKNW 97 (306)
T ss_pred CCEEEEECCCCCC---CCC-HHHHhccCccCCEEEEECCCCCCCCCCCCCcccCCHHHHHHHHHHHHHH---cC--CCCE
Confidence 4568999996422 111 22334455568999999999998765332 234444444444443 33 3579
Q ss_pred EEEEcCchHHHHHHHHHHHHHh
Q 012898 278 YLMGQSAGAHIAACTLLEQAIK 299 (454)
Q Consensus 278 ~l~G~S~GG~la~~~a~~~~~~ 299 (454)
.++|||+||.+++.++.+++..
T Consensus 98 ~lvG~S~GG~ia~~~a~~~p~~ 119 (306)
T TIGR01249 98 LVFGGSWGSTLALAYAQTHPEV 119 (306)
T ss_pred EEEEECHHHHHHHHHHHHChHh
Confidence 9999999999999999887654
No 76
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=99.38 E-value=1.5e-11 Score=120.29 Aligned_cols=203 Identities=15% Similarity=0.169 Sum_probs=114.0
Q ss_pred CCCcEEEEEcCCCccCCcccchhHHHHHHHhCCcEEEEEecCCCCCCChh----HHHHHHHHHHHHHHHhhhhcCCCCCc
Q 012898 201 GPKPVVAFITGGAWIIGYKAWGSLLGQQLSERDIIVACIDYRNFPQGTIK----DMVKDASQGISFVCNNISEYGGDPDR 276 (454)
Q Consensus 201 ~~~Pvvv~~HGgg~~~g~~~~~~~~~~~la~~G~~Vv~~dyr~~~~~~~~----~~~~D~~~al~~l~~~~~~~g~d~~r 276 (454)
++.|.|||+||.+ ++...|..+...|.+.||.|+++|+++++.+... ..++|.. +.+.+.+...+. .++
T Consensus 16 ~~~p~vvliHG~~---~~~~~w~~~~~~L~~~g~~vi~~dl~g~G~s~~~~~~~~~~~~~~---~~l~~~i~~l~~-~~~ 88 (273)
T PLN02211 16 RQPPHFVLIHGIS---GGSWCWYKIRCLMENSGYKVTCIDLKSAGIDQSDADSVTTFDEYN---KPLIDFLSSLPE-NEK 88 (273)
T ss_pred CCCCeEEEECCCC---CCcCcHHHHHHHHHhCCCEEEEecccCCCCCCCCcccCCCHHHHH---HHHHHHHHhcCC-CCC
Confidence 4568999999954 3344567788889889999999999998864321 1233322 333333333322 368
Q ss_pred EEEEEcCchHHHHHHHHHHHHHhhhCCCCCccc------ch-hhhhhh--------------ccccC----C-CCCChh-
Q 012898 277 IYLMGQSAGAHIAACTLLEQAIKETGEGESTTW------SV-SQIRAY--------------FGLSG----G-IMDGEE- 329 (454)
Q Consensus 277 I~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~------~~-~~i~~~--------------~~~~g----~-~~~~~~- 329 (454)
++|+||||||.++..++...+............ .. ...... +.... . .....+
T Consensus 89 v~lvGhS~GG~v~~~~a~~~p~~v~~lv~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (273)
T PLN02211 89 VILVGHSAGGLSVTQAIHRFPKKICLAVYVAATMLKLGFQTDEDMKDGVPDLSEFGDVYELGFGLGPDQPPTSAIIKKEF 168 (273)
T ss_pred EEEEEECchHHHHHHHHHhChhheeEEEEeccccCCCCCCHHHHHhccccchhhhccceeeeeccCCCCCCceeeeCHHH
Confidence 999999999999999987654432221110000 00 000000 00000 0 000000
Q ss_pred ---hhhcCCc---------------ccccCCCcccc-ccCC-CCCEEEEEeCCCCCCChHHHHHHHHHHHHcCCCEEEEE
Q 012898 330 ---SLRQYSP---------------EVLVQDPNTRH-AVSL-LPPIILFHGTADYSIPADASKNFANTLQRVGVRAESIL 389 (454)
Q Consensus 330 ---~~~~~~p---------------~~~~~~~~~~~-~~~~-~pPvLiihGe~D~~Vp~~~s~~l~~~l~~~g~~vel~~ 389 (454)
.+....+ ........... ..+. ..|+++|+|++|..+|.+..+.+++.+. ..+++.
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~l~I~g~~D~~ip~~~~~~m~~~~~----~~~~~~ 244 (273)
T PLN02211 169 RRKILYQMSPQEDSTLAAMLLRPGPILALRSARFEEETGDIDKVPRVYIKTLHDHVVKPEQQEAMIKRWP----PSQVYE 244 (273)
T ss_pred HHHHHhcCCCHHHHHHHHHhcCCcCccccccccccccccccCccceEEEEeCCCCCCCHHHHHHHHHhCC----ccEEEE
Confidence 0000001 00011111111 1112 4599999999999999999999998765 247777
Q ss_pred eCCCCccccccCCCCCCcHHHHHHHHHHHHHh
Q 012898 390 YEGKTHTDLFLQDPMRGGKDDMFEDIVAIIHA 421 (454)
Q Consensus 390 ~~g~~H~~~~l~~p~~~~~~~~~~~i~~Fl~~ 421 (454)
++ +||. .++..| +++.+.|.++...
T Consensus 245 l~-~gH~-p~ls~P-----~~~~~~i~~~a~~ 269 (273)
T PLN02211 245 LE-SDHS-PFFSTP-----FLLFGLLIKAAAS 269 (273)
T ss_pred EC-CCCC-ccccCH-----HHHHHHHHHHHHH
Confidence 87 7997 554444 7777777776543
No 77
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=99.35 E-value=5.6e-12 Score=118.57 Aligned_cols=179 Identities=22% Similarity=0.213 Sum_probs=99.2
Q ss_pred eEEEEeeCCC-CCCCcEEEEEcCCCccCCcccchhH--HHHHHHhC-CcEEEEEecCCC--CCCCh---h----HHHHHH
Q 012898 190 RLDLYFPKSS-DGPKPVVAFITGGAWIIGYKAWGSL--LGQQLSER-DIIVACIDYRNF--PQGTI---K----DMVKDA 256 (454)
Q Consensus 190 ~l~vy~P~~~-~~~~Pvvv~~HGgg~~~g~~~~~~~--~~~~la~~-G~~Vv~~dyr~~--~~~~~---~----~~~~D~ 256 (454)
...+|+|+.. .++.|+||++||.+. +...+.. -...+|++ ||+|+.++-... ....| . ....|.
T Consensus 2 ~Y~lYvP~~~~~~~~PLVv~LHG~~~---~a~~~~~~s~~~~lAd~~GfivvyP~~~~~~~~~~cw~w~~~~~~~g~~d~ 78 (220)
T PF10503_consen 2 SYRLYVPPGAPRGPVPLVVVLHGCGQ---SAEDFAAGSGWNALADREGFIVVYPEQSRRANPQGCWNWFSDDQQRGGGDV 78 (220)
T ss_pred cEEEecCCCCCCCCCCEEEEeCCCCC---CHHHHHhhcCHHHHhhcCCeEEEcccccccCCCCCcccccccccccCccch
Confidence 4689999864 347899999999753 3222211 12456666 999998874321 11111 1 111233
Q ss_pred HHHHHHHHHhhhhcCCCCCcEEEEEcCchHHHHHHHHHHHHHhhhCCCCCcccchh----hhhhhc-cccCCCCCChhhh
Q 012898 257 SQGISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLLEQAIKETGEGESTTWSVS----QIRAYF-GLSGGIMDGEESL 331 (454)
Q Consensus 257 ~~al~~l~~~~~~~g~d~~rI~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~----~i~~~~-~~~g~~~~~~~~~ 331 (454)
......++....++++|++||++.|+|+||.++..++..+++.............. .....- ...|.........
T Consensus 79 ~~i~~lv~~v~~~~~iD~~RVyv~G~S~Gg~ma~~la~~~pd~faa~a~~sG~~~~~a~~~~~a~~~m~~g~~~~p~~~~ 158 (220)
T PF10503_consen 79 AFIAALVDYVAARYNIDPSRVYVTGLSNGGMMANVLACAYPDLFAAVAVVSGVPYGCAASGASALSAMRSGPRPAPAAAW 158 (220)
T ss_pred hhHHHHHHhHhhhcccCCCceeeEEECHHHHHHHHHHHhCCccceEEEeecccccccccCcccHHHHhhCCCCCChHHHH
Confidence 22222333334567899999999999999999999998877665432111110000 000000 0001000000000
Q ss_pred hcCCcccccCCCccccccCCCCCEEEEEeCCCCCCChHHHHHHHHHHHHc
Q 012898 332 RQYSPEVLVQDPNTRHAVSLLPPIILFHGTADYSIPADASKNFANTLQRV 381 (454)
Q Consensus 332 ~~~~p~~~~~~~~~~~~~~~~pPvLiihGe~D~~Vp~~~s~~l~~~l~~~ 381 (454)
.... .. .... ..|++++||+.|..|.+..++++.+.+...
T Consensus 159 ~a~~-----~~----g~~~-~~P~~v~hG~~D~tV~~~n~~~~~~q~~~~ 198 (220)
T PF10503_consen 159 GARS-----DA----GAYP-GYPRIVFHGTADTTVNPQNADQLVAQWLNV 198 (220)
T ss_pred Hhhh-----hc----cCCC-CCCEEEEecCCCCccCcchHHHHHHHHHHc
Confidence 0000 00 0011 138999999999999999999999988753
No 78
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.34 E-value=7.5e-11 Score=114.62 Aligned_cols=234 Identities=15% Similarity=0.142 Sum_probs=139.5
Q ss_pred eeceeccCCCCeeEEEEeeCCCCCCCcEEEEEcCCCccCCccc-chhHHHHHHHhCCcEEEEEecCCCCCCCh-------
Q 012898 178 RRGIVYGDQPRNRLDLYFPKSSDGPKPVVAFITGGAWIIGYKA-WGSLLGQQLSERDIIVACIDYRNFPQGTI------- 249 (454)
Q Consensus 178 ~~~v~y~~~~~~~l~vy~P~~~~~~~Pvvv~~HGgg~~~g~~~-~~~~~~~~la~~G~~Vv~~dyr~~~~~~~------- 249 (454)
++.+-+++++-..+++..++. +...|.||.+||-. +++.+ ....++..+.++||.||+++.|+++....
T Consensus 51 re~v~~pdg~~~~ldw~~~p~-~~~~P~vVl~HGL~--G~s~s~y~r~L~~~~~~rg~~~Vv~~~Rgcs~~~n~~p~~yh 127 (345)
T COG0429 51 RERLETPDGGFIDLDWSEDPR-AAKKPLVVLFHGLE--GSSNSPYARGLMRALSRRGWLVVVFHFRGCSGEANTSPRLYH 127 (345)
T ss_pred eEEEEcCCCCEEEEeeccCcc-ccCCceEEEEeccC--CCCcCHHHHHHHHHHHhcCCeEEEEecccccCCcccCcceec
Confidence 456666676666777777533 34569999999931 22222 44568899999999999999999865432
Q ss_pred hHHHHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCchHHHHHHHHHHHHHhhhCCCCCcccchhhhhhh-ccc-cCC----
Q 012898 250 KDMVKDASQGISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLLEQAIKETGEGESTTWSVSQIRAY-FGL-SGG---- 323 (454)
Q Consensus 250 ~~~~~D~~~al~~l~~~~~~~g~d~~rI~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~~i~~~-~~~-~g~---- 323 (454)
....+|+...++|+++. .-+.++..+|.|+||++.+.++.+.........+.....+-.+... ..+ .+.
T Consensus 128 ~G~t~D~~~~l~~l~~~-----~~~r~~~avG~SLGgnmLa~ylgeeg~d~~~~aa~~vs~P~Dl~~~~~~l~~~~s~~l 202 (345)
T COG0429 128 SGETEDIRFFLDWLKAR-----FPPRPLYAVGFSLGGNMLANYLGEEGDDLPLDAAVAVSAPFDLEACAYRLDSGFSLRL 202 (345)
T ss_pred ccchhHHHHHHHHHHHh-----CCCCceEEEEecccHHHHHHHHHhhccCcccceeeeeeCHHHHHHHHHHhcCchhhhh
Confidence 23358899999999874 3457999999999997777776664433221111111111111100 000 000
Q ss_pred -----------------------CCCC-hhhhh------cCC-------------cccccCCCccccccCCCCCEEEEEe
Q 012898 324 -----------------------IMDG-EESLR------QYS-------------PEVLVQDPNTRHAVSLLPPIILFHG 360 (454)
Q Consensus 324 -----------------------~~~~-~~~~~------~~~-------------p~~~~~~~~~~~~~~~~pPvLiihG 360 (454)
.... .+.++ +++ .+.+...+.+....++..|+||+|.
T Consensus 203 y~r~l~~~L~~~~~~kl~~l~~~~p~~~~~~ik~~~ti~eFD~~~Tap~~Gf~da~dYYr~aSs~~~L~~Ir~PtLii~A 282 (345)
T COG0429 203 YSRYLLRNLKRNAARKLKELEPSLPGTVLAAIKRCRTIREFDDLLTAPLHGFADAEDYYRQASSLPLLPKIRKPTLIINA 282 (345)
T ss_pred hHHHHHHHHHHHHHHHHHhcCcccCcHHHHHHHhhchHHhccceeeecccCCCcHHHHHHhccccccccccccceEEEec
Confidence 0000 01111 110 0111222333344555669999999
Q ss_pred CCCCCCChHHHHHHHHHHHHcCCCEEEEEeCCCCccccccCCCCCCcHHHHHHHHHHHHHhcC
Q 012898 361 TADYSIPADASKNFANTLQRVGVRAESILYEGKTHTDLFLQDPMRGGKDDMFEDIVAIIHADD 423 (454)
Q Consensus 361 e~D~~Vp~~~s~~l~~~l~~~g~~vel~~~~g~~H~~~~l~~p~~~~~~~~~~~i~~Fl~~~~ 423 (454)
.+|++++.+...+.... .+..+.+.+.+.+||..+... ..........+.+.+|++...
T Consensus 283 ~DDP~~~~~~iP~~~~~---~np~v~l~~t~~GGHvGfl~~-~~~~~~~W~~~ri~~~l~~~~ 341 (345)
T COG0429 283 KDDPFMPPEVIPKLQEM---LNPNVLLQLTEHGGHVGFLGG-KLLHPQMWLEQRILDWLDPFL 341 (345)
T ss_pred CCCCCCChhhCCcchhc---CCCceEEEeecCCceEEeccC-ccccchhhHHHHHHHHHHHHH
Confidence 99999887554444432 355799999999999966543 222222366788888887643
No 79
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=99.34 E-value=2.9e-11 Score=123.55 Aligned_cols=214 Identities=15% Similarity=0.089 Sum_probs=121.5
Q ss_pred EEEEeeCCCCCCCcEEEEEcCCCccCCcccchhHHHHHHHhCCcEEEEEecCCCCCCChhHH----HHHHHHHHHHHHHh
Q 012898 191 LDLYFPKSSDGPKPVVAFITGGAWIIGYKAWGSLLGQQLSERDIIVACIDYRNFPQGTIKDM----VKDASQGISFVCNN 266 (454)
Q Consensus 191 l~vy~P~~~~~~~Pvvv~~HGgg~~~g~~~~~~~~~~~la~~G~~Vv~~dyr~~~~~~~~~~----~~D~~~al~~l~~~ 266 (454)
+++++-....+..|.|||+||.+ ++...|..+...|++ +|.|+++|++++|.+..+.. ..+.....+++.+.
T Consensus 115 ~~~~y~~~G~~~~~~ivllHG~~---~~~~~w~~~~~~L~~-~~~Via~DlpG~G~S~~p~~~~~~~ys~~~~a~~l~~~ 190 (383)
T PLN03084 115 FRWFCVESGSNNNPPVLLIHGFP---SQAYSYRKVLPVLSK-NYHAIAFDWLGFGFSDKPQPGYGFNYTLDEYVSSLESL 190 (383)
T ss_pred eEEEEEecCCCCCCeEEEECCCC---CCHHHHHHHHHHHhc-CCEEEEECCCCCCCCCCCcccccccCCHHHHHHHHHHH
Confidence 33333333333468999999954 344455667777765 79999999999987654321 11233344444444
Q ss_pred hhhcCCCCCcEEEEEcCchHHHHHHHHHHHHHhhhCCCCCccc-------chhhhhhh--------cc------------
Q 012898 267 ISEYGGDPDRIYLMGQSAGAHIAACTLLEQAIKETGEGESTTW-------SVSQIRAY--------FG------------ 319 (454)
Q Consensus 267 ~~~~g~d~~rI~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~-------~~~~i~~~--------~~------------ 319 (454)
+.+.++ +++.|+|||+||.+++.++.+++.+.......... .+..+..+ +.
T Consensus 191 i~~l~~--~~~~LvG~s~GG~ia~~~a~~~P~~v~~lILi~~~~~~~~~~~p~~l~~~~~~l~~~~~~~~~~~~~~~~~~ 268 (383)
T PLN03084 191 IDELKS--DKVSLVVQGYFSPPVVKYASAHPDKIKKLILLNPPLTKEHAKLPSTLSEFSNFLLGEIFSQDPLRASDKALT 268 (383)
T ss_pred HHHhCC--CCceEEEECHHHHHHHHHHHhChHhhcEEEEECCCCccccccchHHHHHHHHHHhhhhhhcchHHHHhhhhc
Confidence 444444 47999999999999999998876553322110000 00000000 00
Q ss_pred ccCCCCCChhhhhcC----C-cc----cc------cCCC--c----ccc---ccCCCCCEEEEEeCCCCCCChHHHHHHH
Q 012898 320 LSGGIMDGEESLRQY----S-PE----VL------VQDP--N----TRH---AVSLLPPIILFHGTADYSIPADASKNFA 375 (454)
Q Consensus 320 ~~g~~~~~~~~~~~~----~-p~----~~------~~~~--~----~~~---~~~~~pPvLiihGe~D~~Vp~~~s~~l~ 375 (454)
.........+....+ . +. .. .... . ... ......|+++++|+.|..++.+..++++
T Consensus 269 ~~~~~~~~~e~~~~~~~~~~~~~~~~~~l~~~~r~~~~~l~~~~~~l~~~l~~~~i~vPvLiI~G~~D~~v~~~~~~~~a 348 (383)
T PLN03084 269 SCGPYAMKEDDAMVYRRPYLTSGSSGFALNAISRSMKKELKKYIEEMRSILTDKNWKTPITVCWGLRDRWLNYDGVEDFC 348 (383)
T ss_pred ccCccCCCHHHHHHHhccccCCcchHHHHHHHHHHhhcccchhhHHHHhhhccccCCCCEEEEeeCCCCCcCHHHHHHHH
Confidence 000000000000000 0 00 00 0000 0 000 0123569999999999999998887777
Q ss_pred HHHHHcCCCEEEEEeCCCCccccccCCCCCCcHHHHHHHHHHHHHh
Q 012898 376 NTLQRVGVRAESILYEGKTHTDLFLQDPMRGGKDDMFEDIVAIIHA 421 (454)
Q Consensus 376 ~~l~~~g~~vel~~~~g~~H~~~~l~~p~~~~~~~~~~~i~~Fl~~ 421 (454)
+.. +.+++++++++|. .... ..+++.+.|.+|+++
T Consensus 349 ~~~-----~a~l~vIp~aGH~-~~~E-----~Pe~v~~~I~~Fl~~ 383 (383)
T PLN03084 349 KSS-----QHKLIELPMAGHH-VQED-----CGEELGGIISGILSK 383 (383)
T ss_pred Hhc-----CCeEEEECCCCCC-cchh-----CHHHHHHHHHHHhhC
Confidence 752 5689999999997 4444 448999999999863
No 80
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.32 E-value=1.4e-11 Score=120.18 Aligned_cols=208 Identities=19% Similarity=0.257 Sum_probs=124.0
Q ss_pred CCCcEEEEEcCCCccCCcccchhHHHHHHHhCCcEEEEEecCCCCCCChhHHHHHHHHHHHHHHHhhhhc--CCCCCcEE
Q 012898 201 GPKPVVAFITGGAWIIGYKAWGSLLGQQLSERDIIVACIDYRNFPQGTIKDMVKDASQGISFVCNNISEY--GGDPDRIY 278 (454)
Q Consensus 201 ~~~Pvvv~~HGgg~~~g~~~~~~~~~~~la~~G~~Vv~~dyr~~~~~~~~~~~~D~~~al~~l~~~~~~~--g~d~~rI~ 278 (454)
.++..+|++||-| .|...+. .-...|++ ...|.++|..++|.+.-|.--.|...+..|..+.++++ ..+-++..
T Consensus 88 ~~~~plVliHGyG--Ag~g~f~-~Nf~~La~-~~~vyaiDllG~G~SSRP~F~~d~~~~e~~fvesiE~WR~~~~L~Kmi 163 (365)
T KOG4409|consen 88 ANKTPLVLIHGYG--AGLGLFF-RNFDDLAK-IRNVYAIDLLGFGRSSRPKFSIDPTTAEKEFVESIEQWRKKMGLEKMI 163 (365)
T ss_pred cCCCcEEEEeccc--hhHHHHH-Hhhhhhhh-cCceEEecccCCCCCCCCCCCCCcccchHHHHHHHHHHHHHcCCccee
Confidence 5567799999943 2332232 23355666 79999999999998876654444444444555555443 12334899
Q ss_pred EEEcCchHHHHHHHHHHHHHhhhCCCCCcccchhh---------------hhhhc------------cccCCC-------
Q 012898 279 LMGQSAGAHIAACTLLEQAIKETGEGESTTWSVSQ---------------IRAYF------------GLSGGI------- 324 (454)
Q Consensus 279 l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~~---------------i~~~~------------~~~g~~------- 324 (454)
|+|||+||+++..+|+.++++.........|.... .+..+ ...|+.
T Consensus 164 lvGHSfGGYLaa~YAlKyPerV~kLiLvsP~Gf~~~~~~~~~~~~~~~~w~~~~~~~~~~~nPl~~LR~~Gp~Gp~Lv~~ 243 (365)
T KOG4409|consen 164 LVGHSFGGYLAAKYALKYPERVEKLILVSPWGFPEKPDSEPEFTKPPPEWYKALFLVATNFNPLALLRLMGPLGPKLVSR 243 (365)
T ss_pred EeeccchHHHHHHHHHhChHhhceEEEecccccccCCCcchhhcCCChHHHhhhhhhhhcCCHHHHHHhccccchHHHhh
Confidence 99999999999999999887744321111111100 00011 111110
Q ss_pred --------C---CChhhhhcC-------------------CcccccCCCccccc--cCCCCCEEEEEeCCCCCCChHHHH
Q 012898 325 --------M---DGEESLRQY-------------------SPEVLVQDPNTRHA--VSLLPPIILFHGTADYSIPADASK 372 (454)
Q Consensus 325 --------~---~~~~~~~~~-------------------~p~~~~~~~~~~~~--~~~~pPvLiihGe~D~~Vp~~~s~ 372 (454)
. ..++.+..+ .+..+...+.+... .+...|+++++|++|-+ ....+.
T Consensus 244 ~~~d~~~k~~~~~~ed~l~~YiY~~n~~~psgE~~fk~l~~~~g~Ar~Pm~~r~~~l~~~~pv~fiyG~~dWm-D~~~g~ 322 (365)
T KOG4409|consen 244 LRPDRFRKFPSLIEEDFLHEYIYHCNAQNPSGETAFKNLFEPGGWARRPMIQRLRELKKDVPVTFIYGDRDWM-DKNAGL 322 (365)
T ss_pred hhHHHHHhccccchhHHHHHHHHHhcCCCCcHHHHHHHHHhccchhhhhHHHHHHhhccCCCEEEEecCcccc-cchhHH
Confidence 0 000000000 00011111111222 22346999999999965 566777
Q ss_pred HHHHHHHHcCCCEEEEEeCCCCccccccCCCCCCcHHHHHHHHHHHHHh
Q 012898 373 NFANTLQRVGVRAESILYEGKTHTDLFLQDPMRGGKDDMFEDIVAIIHA 421 (454)
Q Consensus 373 ~l~~~l~~~g~~vel~~~~g~~H~~~~l~~p~~~~~~~~~~~i~~Fl~~ 421 (454)
++.+.+. ...++.++++++||. +++..| +.+.+.++++++.
T Consensus 323 ~~~~~~~--~~~~~~~~v~~aGHh-vylDnp-----~~Fn~~v~~~~~~ 363 (365)
T KOG4409|consen 323 EVTKSLM--KEYVEIIIVPGAGHH-VYLDNP-----EFFNQIVLEECDK 363 (365)
T ss_pred HHHHHhh--cccceEEEecCCCce-eecCCH-----HHHHHHHHHHHhc
Confidence 7777653 336999999999998 877766 8888988888875
No 81
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=99.32 E-value=4.7e-11 Score=116.18 Aligned_cols=215 Identities=18% Similarity=0.222 Sum_probs=127.9
Q ss_pred EEEEeeCCCCCCCcEEEEEcCCCccCCcccchhHHHHHHHhCCcEEEEEecCCCCCCChhHH-----HHHHHHHHHHHHH
Q 012898 191 LDLYFPKSSDGPKPVVAFITGGAWIIGYKAWGSLLGQQLSERDIIVACIDYRNFPQGTIKDM-----VKDASQGISFVCN 265 (454)
Q Consensus 191 l~vy~P~~~~~~~Pvvv~~HGgg~~~g~~~~~~~~~~~la~~G~~Vv~~dyr~~~~~~~~~~-----~~D~~~al~~l~~ 265 (454)
+++.+.....+..|+|+++||-. .....++.....|+.+||.|+++|.||++.+.-|.. +..+..-+..+.+
T Consensus 32 I~~h~~e~g~~~gP~illlHGfP---e~wyswr~q~~~la~~~~rviA~DlrGyG~Sd~P~~~~~Yt~~~l~~di~~lld 108 (322)
T KOG4178|consen 32 IRLHYVEGGPGDGPIVLLLHGFP---ESWYSWRHQIPGLASRGYRVIAPDLRGYGFSDAPPHISEYTIDELVGDIVALLD 108 (322)
T ss_pred EEEEEEeecCCCCCEEEEEccCC---ccchhhhhhhhhhhhcceEEEecCCCCCCCCCCCCCcceeeHHHHHHHHHHHHH
Confidence 66666666667789999999943 233345667889999999999999999998876543 2222222222222
Q ss_pred hhhhcCCCCCcEEEEEcCchHHHHHHHHHHHHHhhhCCCCCcc-cc---hh---hhhhhccccCC--------C------
Q 012898 266 NISEYGGDPDRIYLMGQSAGAHIAACTLLEQAIKETGEGESTT-WS---VS---QIRAYFGLSGG--------I------ 324 (454)
Q Consensus 266 ~~~~~g~d~~rI~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~-~~---~~---~i~~~~~~~g~--------~------ 324 (454)
+ +| -+++.++||.+|+.+|..+++.++.+..+.+.... .. .. ...+.+...-. .
T Consensus 109 ~---Lg--~~k~~lvgHDwGaivaw~la~~~Perv~~lv~~nv~~~~p~~~~~~~~~~~f~~~~y~~~fQ~~~~~E~~~s 183 (322)
T KOG4178|consen 109 H---LG--LKKAFLVGHDWGAIVAWRLALFYPERVDGLVTLNVPFPNPKLKPLDSSKAIFGKSYYICLFQEPGKPETELS 183 (322)
T ss_pred H---hc--cceeEEEeccchhHHHHHHHHhChhhcceEEEecCCCCCcccchhhhhccccCccceeEeccccCcchhhhc
Confidence 2 23 36999999999999999999988776544311100 00 00 01111110000 0
Q ss_pred -------------------------------CCChhhhhcCC----------cccc----cCCCc--cccccCCCCCEEE
Q 012898 325 -------------------------------MDGEESLRQYS----------PEVL----VQDPN--TRHAVSLLPPIIL 357 (454)
Q Consensus 325 -------------------------------~~~~~~~~~~~----------p~~~----~~~~~--~~~~~~~~pPvLi 357 (454)
+...+.+.-+. +.++ ..+.. -........|+++
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~t~edi~~~~~~f~~~g~~gplNyyrn~~r~w~a~~~~~~~i~iPv~f 263 (322)
T KOG4178|consen 184 KDDTEMLVKTFRTRKTPGPLIVPKQPNENPLWLTEEDIAFYVSKFQIDGFTGPLNYYRNFRRNWEAAPWALAKITIPVLF 263 (322)
T ss_pred cchhHHhHHhhhccccCCccccCCCCCCccchhhHHHHHHHHhccccccccccchhhHHHhhCchhccccccccccceEE
Confidence 00000000000 0000 01110 1122334569999
Q ss_pred EEeCCCCCCChH-HHHHHHHHHHHcCCCEEEEEeCCCCccccccCCCCCCcHHHHHHHHHHHHHhc
Q 012898 358 FHGTADYSIPAD-ASKNFANTLQRVGVRAESILYEGKTHTDLFLQDPMRGGKDDMFEDIVAIIHAD 422 (454)
Q Consensus 358 ihGe~D~~Vp~~-~s~~l~~~l~~~g~~vel~~~~g~~H~~~~l~~p~~~~~~~~~~~i~~Fl~~~ 422 (454)
++|+.|.+.++. +++.+.+.+.. -.+.++++|+||. ....+| +++.+.+++||++.
T Consensus 264 i~G~~D~v~~~p~~~~~~rk~vp~---l~~~vv~~~~gH~-vqqe~p-----~~v~~~i~~f~~~~ 320 (322)
T KOG4178|consen 264 IWGDLDPVLPYPIFGELYRKDVPR---LTERVVIEGIGHF-VQQEKP-----QEVNQAILGFINSF 320 (322)
T ss_pred EEecCcccccchhHHHHHHHhhcc---ccceEEecCCccc-ccccCH-----HHHHHHHHHHHHhh
Confidence 999999998776 44444444432 3478899999996 554444 89999999999874
No 82
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=99.31 E-value=1.7e-11 Score=123.64 Aligned_cols=65 Identities=15% Similarity=0.245 Sum_probs=53.1
Q ss_pred CCCCCEEEEEeCCCCCCChHHHHHHHHHHHHcCCCEEEEEeCC-CCccccccCCCCCCcHHHHHHHHHHHHHhcC
Q 012898 350 SLLPPIILFHGTADYSIPADASKNFANTLQRVGVRAESILYEG-KTHTDLFLQDPMRGGKDDMFEDIVAIIHADD 423 (454)
Q Consensus 350 ~~~pPvLiihGe~D~~Vp~~~s~~l~~~l~~~g~~vel~~~~g-~~H~~~~l~~p~~~~~~~~~~~i~~Fl~~~~ 423 (454)
+...|+|+++|++|.++|.+.++++++.+.. +.+++++++ +||. .++.+| +++.+.+.+||++..
T Consensus 275 ~I~~PtLvi~G~~D~~~p~~~~~~~~~~i~p---~a~l~~i~~~aGH~-~~lE~P-----e~~~~~l~~FL~~~~ 340 (343)
T PRK08775 275 AIRVPTVVVAVEGDRLVPLADLVELAEGLGP---RGSLRVLRSPYGHD-AFLKET-----DRIDAILTTALRSTG 340 (343)
T ss_pred cCCCCeEEEEeCCCEeeCHHHHHHHHHHcCC---CCeEEEEeCCccHH-HHhcCH-----HHHHHHHHHHHHhcc
Confidence 4556999999999999999999888887632 578999985 9997 555555 899999999998653
No 83
>KOG2112 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=99.30 E-value=4.6e-11 Score=109.03 Aligned_cols=179 Identities=25% Similarity=0.293 Sum_probs=119.0
Q ss_pred cEEEEEcCCCccCCcccchhHHHHHHHhCCcEEEEEecCCCCC---------CC------------hhHHHHHHHHHHHH
Q 012898 204 PVVAFITGGAWIIGYKAWGSLLGQQLSERDIIVACIDYRNFPQ---------GT------------IKDMVKDASQGISF 262 (454)
Q Consensus 204 Pvvv~~HGgg~~~g~~~~~~~~~~~la~~G~~Vv~~dyr~~~~---------~~------------~~~~~~D~~~al~~ 262 (454)
-+|||+||-|- +...+..+.+.+.-.++..+++.-+..+. .+ -...+......+.+
T Consensus 4 atIi~LHglGD---sg~~~~~~~~~l~l~NiKwIcP~aP~rpvt~~~G~~~~aWfd~~~~~~~~~~d~~~~~~aa~~i~~ 80 (206)
T KOG2112|consen 4 ATIIFLHGLGD---SGSGWAQFLKQLPLPNIKWICPTAPSRPVTLNGGAFMNAWFDIMELSSDAPEDEEGLHRAADNIAN 80 (206)
T ss_pred EEEEEEecCCC---CCccHHHHHHcCCCCCeeEEcCCCCCCcccccCCCcccceecceeeCcccchhhhHHHHHHHHHHH
Confidence 48999999652 22222334444444466666663221100 00 01224445667777
Q ss_pred HHHhhhhcCCCCCcEEEEEcCchHHHHHHHHHHHHHhhhCCCCCcccchhhhhhhccccCCCCCChhhhhcCCcccccCC
Q 012898 263 VCNNISEYGGDPDRIYLMGQSAGAHIAACTLLEQAIKETGEGESTTWSVSQIRAYFGLSGGIMDGEESLRQYSPEVLVQD 342 (454)
Q Consensus 263 l~~~~~~~g~d~~rI~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~~~~~p~~~~~~ 342 (454)
+.++..+.|++++||.+.|+|+||.+++..+...+ ..+.+.+..++........+..+.+...
T Consensus 81 Li~~e~~~Gi~~~rI~igGfs~G~a~aL~~~~~~~--------------~~l~G~~~~s~~~p~~~~~~~~~~~~~~--- 143 (206)
T KOG2112|consen 81 LIDNEPANGIPSNRIGIGGFSQGGALALYSALTYP--------------KALGGIFALSGFLPRASIGLPGWLPGVN--- 143 (206)
T ss_pred HHHHHHHcCCCccceeEcccCchHHHHHHHHhccc--------------cccceeeccccccccchhhccCCccccC---
Confidence 77777788999999999999999999999988641 2233334444311111122222211100
Q ss_pred CccccccCCCCCEEEEEeCCCCCCChHHHHHHHHHHHHcCCCEEEEEeCCCCccccccCCCCCCcHHHHHHHHHHHHHh
Q 012898 343 PNTRHAVSLLPPIILFHGTADYSIPADASKNFANTLQRVGVRAESILYEGKTHTDLFLQDPMRGGKDDMFEDIVAIIHA 421 (454)
Q Consensus 343 ~~~~~~~~~~pPvLiihGe~D~~Vp~~~s~~l~~~l~~~g~~vel~~~~g~~H~~~~l~~p~~~~~~~~~~~i~~Fl~~ 421 (454)
.+|++..||+.|++||..-+++.++.++..+..++++.|+|.+|. . ..+-++++..|+..
T Consensus 144 ---------~~~i~~~Hg~~d~~vp~~~g~~s~~~l~~~~~~~~f~~y~g~~h~-~---------~~~e~~~~~~~~~~ 203 (206)
T KOG2112|consen 144 ---------YTPILLCHGTADPLVPFRFGEKSAQFLKSLGVRVTFKPYPGLGHS-T---------SPQELDDLKSWIKT 203 (206)
T ss_pred ---------cchhheecccCCceeehHHHHHHHHHHHHcCCceeeeecCCcccc-c---------cHHHHHHHHHHHHH
Confidence 459999999999999999999999999999999999999999997 2 24778888888876
No 84
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=99.29 E-value=4.3e-11 Score=122.55 Aligned_cols=69 Identities=16% Similarity=0.218 Sum_probs=58.2
Q ss_pred CCCCCEEEEEeCCCCCCChHHHHHHHHHHHHcCCCEEEEEeC-CCCccccccCCCCCCcHHHHHHHHHHHHHhcCh
Q 012898 350 SLLPPIILFHGTADYSIPADASKNFANTLQRVGVRAESILYE-GKTHTDLFLQDPMRGGKDDMFEDIVAIIHADDQ 424 (454)
Q Consensus 350 ~~~pPvLiihGe~D~~Vp~~~s~~l~~~l~~~g~~vel~~~~-g~~H~~~~l~~p~~~~~~~~~~~i~~Fl~~~~~ 424 (454)
+...|+|+++|+.|.++|.+.++.+++.+...+..+++.+++ ++||. .++.+| +++.+.|.+||++..+
T Consensus 307 ~I~~PtLvI~G~~D~~~p~~~~~~la~~i~~a~~~~~l~~i~~~~GH~-~~le~p-----~~~~~~L~~FL~~~~~ 376 (379)
T PRK00175 307 RIKARFLVVSFTSDWLFPPARSREIVDALLAAGADVSYAEIDSPYGHD-AFLLDD-----PRYGRLVRAFLERAAR 376 (379)
T ss_pred cCCCCEEEEEECCccccCHHHHHHHHHHHHhcCCCeEEEEeCCCCCch-hHhcCH-----HHHHHHHHHHHHhhhh
Confidence 456799999999999999999999999998776677888775 99998 555544 7899999999998654
No 85
>KOG4388 consensus Hormone-sensitive lipase HSL [Lipid transport and metabolism]
Probab=99.29 E-value=2.9e-11 Score=123.39 Aligned_cols=106 Identities=17% Similarity=0.305 Sum_probs=89.6
Q ss_pred eEEEEeeCCCCCCCcEEEEEcCCCccCCcccchhHHHHHHHhC-CcEEEEEecCCCCCCChhHHHHHHHHHHHHHHHhhh
Q 012898 190 RLDLYFPKSSDGPKPVVAFITGGAWIIGYKAWGSLLGQQLSER-DIIVACIDYRNFPQGTIKDMVKDASQGISFVCNNIS 268 (454)
Q Consensus 190 ~l~vy~P~~~~~~~Pvvv~~HGgg~~~g~~~~~~~~~~~la~~-G~~Vv~~dyr~~~~~~~~~~~~D~~~al~~l~~~~~ 268 (454)
.+..|.++. ...+-+|+.+|||||+..+...+....+.+++. |.-|+++||.+.|+.++|-.++++.-|+.|+.++.+
T Consensus 384 ~~~~wh~P~-p~S~sli~HcHGGGfVAqsSkSHE~YLr~Wa~aL~cPiiSVdYSLAPEaPFPRaleEv~fAYcW~inn~a 462 (880)
T KOG4388|consen 384 SLELWHRPA-PRSRSLIVHCHGGGFVAQSSKSHEPYLRSWAQALGCPIISVDYSLAPEAPFPRALEEVFFAYCWAINNCA 462 (880)
T ss_pred ccccCCCCC-CCCceEEEEecCCceeeeccccccHHHHHHHHHhCCCeEEeeeccCCCCCCCcHHHHHHHHHHHHhcCHH
Confidence 455665542 223458999999999987776666666666665 999999999999999999999999999999999999
Q ss_pred hcCCCCCcEEEEEcCchHHHHHHHHHHH
Q 012898 269 EYGGDPDRIYLMGQSAGAHIAACTLLEQ 296 (454)
Q Consensus 269 ~~g~d~~rI~l~G~S~GG~la~~~a~~~ 296 (454)
..|..-+||++.|+|+||++....+++.
T Consensus 463 llG~TgEriv~aGDSAGgNL~~~VaLr~ 490 (880)
T KOG4388|consen 463 LLGSTGERIVLAGDSAGGNLCFTVALRA 490 (880)
T ss_pred HhCcccceEEEeccCCCcceeehhHHHH
Confidence 9999999999999999999998877764
No 86
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=99.28 E-value=1.2e-10 Score=117.91 Aligned_cols=65 Identities=23% Similarity=0.382 Sum_probs=51.3
Q ss_pred CCCCCEEEEEeCCCCCCChHHHHHHHHHHHHcCCCEEEEE-eCCCCccccccCCCCCCcHHHHHHHHHHHHH
Q 012898 350 SLLPPIILFHGTADYSIPADASKNFANTLQRVGVRAESIL-YEGKTHTDLFLQDPMRGGKDDMFEDIVAIIH 420 (454)
Q Consensus 350 ~~~pPvLiihGe~D~~Vp~~~s~~l~~~l~~~g~~vel~~-~~g~~H~~~~l~~p~~~~~~~~~~~i~~Fl~ 420 (454)
+...|+|+++|++|.++|.+.++.+++.+......+++++ ++++||. .++.+ .+++.+.|.+||+
T Consensus 286 ~I~~P~Lvi~G~~D~~~p~~~~~~~a~~i~~~~~~v~~~~i~~~~GH~-~~le~-----p~~~~~~l~~FL~ 351 (351)
T TIGR01392 286 RIKAPFLVVSITSDWLFPPAESRELAKALPAAGLRVTYVEIESPYGHD-AFLVE-----TDQVEELIRGFLR 351 (351)
T ss_pred hCCCCEEEEEeCCccccCHHHHHHHHHHHhhcCCceEEEEeCCCCCcc-hhhcC-----HHHHHHHHHHHhC
Confidence 4457999999999999999999999999986544444444 4689997 54444 4899999999974
No 87
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=99.27 E-value=5.5e-10 Score=123.28 Aligned_cols=196 Identities=12% Similarity=0.128 Sum_probs=120.9
Q ss_pred HHHHHHHhCCcEEEEEecCCCCCCC------hhHHHHHHHHHHHHHHHhhhhc-----------CCCCCcEEEEEcCchH
Q 012898 224 LLGQQLSERDIIVACIDYRNFPQGT------IKDMVKDASQGISFVCNNISEY-----------GGDPDRIYLMGQSAGA 286 (454)
Q Consensus 224 ~~~~~la~~G~~Vv~~dyr~~~~~~------~~~~~~D~~~al~~l~~~~~~~-----------g~d~~rI~l~G~S~GG 286 (454)
.+.++++++||+||..|.||.+.+. .....+|..++++|+..+...| .....+|+++|.|+||
T Consensus 270 ~~~~~~~~rGYaVV~~D~RGtg~SeG~~~~~~~~E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~SY~G 349 (767)
T PRK05371 270 SLNDYFLPRGFAVVYVSGIGTRGSDGCPTTGDYQEIESMKAVIDWLNGRATAYTDRTRGKEVKADWSNGKVAMTGKSYLG 349 (767)
T ss_pred hHHHHHHhCCeEEEEEcCCCCCCCCCcCccCCHHHHHHHHHHHHHHhhCCccccccccccccccCCCCCeeEEEEEcHHH
Confidence 4568999999999999999976543 2456789999999998642211 1124799999999999
Q ss_pred HHHHHHHHHHHHhhhCCCCC---cccchh-hhhhhccccCCC----------------------CCChhhhhcC----C-
Q 012898 287 HIAACTLLEQAIKETGEGES---TTWSVS-QIRAYFGLSGGI----------------------MDGEESLRQY----S- 335 (454)
Q Consensus 287 ~la~~~a~~~~~~~~~~~~~---~~~~~~-~i~~~~~~~g~~----------------------~~~~~~~~~~----~- 335 (454)
.+++.+|............. ..|... .-.+.+...++. ......+... .
T Consensus 350 ~~~~~aAa~~pp~LkAIVp~a~is~~yd~yr~~G~~~~~~g~~ged~d~l~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~ 429 (767)
T PRK05371 350 TLPNAVATTGVEGLETIIPEAAISSWYDYYRENGLVRAPGGYQGEDLDVLAELTYSRNLLAGDYLRHNEACEKLLAELTA 429 (767)
T ss_pred HHHHHHHhhCCCcceEEEeeCCCCcHHHHhhcCCceeccCCcCCcchhhHHHHhhhcccCcchhhcchHHHHHHHhhhhh
Confidence 99998887643322111111 111000 000000000000 0000000000 0
Q ss_pred ------c---ccccCCCccccccCCCCCEEEEEeCCCCCCChHHHHHHHHHHHHcCCCEEEEEeCCCCccccccCCCCCC
Q 012898 336 ------P---EVLVQDPNTRHAVSLLPPIILFHGTADYSIPADASKNFANTLQRVGVRAESILYEGKTHTDLFLQDPMRG 406 (454)
Q Consensus 336 ------p---~~~~~~~~~~~~~~~~pPvLiihGe~D~~Vp~~~s~~l~~~l~~~g~~vel~~~~g~~H~~~~l~~p~~~ 406 (454)
+ ..+..........+...|+|++||..|..|+.+++.++++++++.+.+.++++.++ +|.... ..
T Consensus 430 ~~~~~~~~y~~fW~~rn~~~~~~kIkvPvLlIhGw~D~~V~~~~s~~ly~aL~~~g~pkkL~l~~g-~H~~~~-----~~ 503 (767)
T PRK05371 430 AQDRKTGDYNDFWDDRNYLKDADKIKASVLVVHGLNDWNVKPKQVYQWWDALPENGVPKKLFLHQG-GHVYPN-----NW 503 (767)
T ss_pred hhhhcCCCccHHHHhCCHhhHhhCCCCCEEEEeeCCCCCCChHHHHHHHHHHHhcCCCeEEEEeCC-CccCCC-----ch
Confidence 0 00011111233445668999999999999999999999999999899999988776 686322 12
Q ss_pred cHHHHHHHHHHHHHhcChh
Q 012898 407 GKDDMFEDIVAIIHADDQE 425 (454)
Q Consensus 407 ~~~~~~~~i~~Fl~~~~~~ 425 (454)
...++.+.+.+|+++.+..
T Consensus 504 ~~~d~~e~~~~Wfd~~LkG 522 (767)
T PRK05371 504 QSIDFRDTMNAWFTHKLLG 522 (767)
T ss_pred hHHHHHHHHHHHHHhcccc
Confidence 3467888899999888654
No 88
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.26 E-value=4.4e-11 Score=119.66 Aligned_cols=207 Identities=14% Similarity=0.154 Sum_probs=119.2
Q ss_pred CCCcEEEEEcCCCccCCcccchhHHHHHHHhC-CcEEEEEecCCCC-CCChhH-HHHHHHHHHHHHHHhhhhcCCCCCcE
Q 012898 201 GPKPVVAFITGGAWIIGYKAWGSLLGQQLSER-DIIVACIDYRNFP-QGTIKD-MVKDASQGISFVCNNISEYGGDPDRI 277 (454)
Q Consensus 201 ~~~Pvvv~~HGgg~~~g~~~~~~~~~~~la~~-G~~Vv~~dyr~~~-~~~~~~-~~~D~~~al~~l~~~~~~~g~d~~rI 277 (454)
...|.||++|| |.. +...+......|.+. |+.|+++|..|++ .+..+. ..-+...-++-+.....+++.. ++
T Consensus 56 ~~~~pvlllHG--F~~-~~~~w~~~~~~L~~~~~~~v~aiDl~G~g~~s~~~~~~~y~~~~~v~~i~~~~~~~~~~--~~ 130 (326)
T KOG1454|consen 56 KDKPPVLLLHG--FGA-SSFSWRRVVPLLSKAKGLRVLAIDLPGHGYSSPLPRGPLYTLRELVELIRRFVKEVFVE--PV 130 (326)
T ss_pred CCCCcEEEecc--ccC-CcccHhhhccccccccceEEEEEecCCCCcCCCCCCCCceehhHHHHHHHHHHHhhcCc--ce
Confidence 46788999999 333 455556666777766 7999999999977 333321 1122222333333333333333 59
Q ss_pred EEEEcCchHHHHHHHHHHHHHhhhCCC---CC--cccc-hhhhhh---hcc---------cc----CC------------
Q 012898 278 YLMGQSAGAHIAACTLLEQAIKETGEG---ES--TTWS-VSQIRA---YFG---------LS----GG------------ 323 (454)
Q Consensus 278 ~l~G~S~GG~la~~~a~~~~~~~~~~~---~~--~~~~-~~~i~~---~~~---------~~----g~------------ 323 (454)
.++|||+||.+|..+|...+....... .. .... ...... .+. .. ..
T Consensus 131 ~lvghS~Gg~va~~~Aa~~P~~V~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 210 (326)
T KOG1454|consen 131 SLVGHSLGGIVALKAAAYYPETVDSLVLLDLLGPPVYSTPKGIKGLRRLLDKFLSALELLIPLSLTEPVRLVSEGLLRCL 210 (326)
T ss_pred EEEEeCcHHHHHHHHHHhCcccccceeeecccccccccCCcchhHHHHhhhhhccHhhhcCccccccchhheeHhhhcce
Confidence 999999999999999988655432221 00 0000 000000 000 00 00
Q ss_pred --CCCC-hhhhhc----CCc--------c------cc-cC--CCccccccCCC-CCEEEEEeCCCCCCChHHHHHHHHHH
Q 012898 324 --IMDG-EESLRQ----YSP--------E------VL-VQ--DPNTRHAVSLL-PPIILFHGTADYSIPADASKNFANTL 378 (454)
Q Consensus 324 --~~~~-~~~~~~----~~p--------~------~~-~~--~~~~~~~~~~~-pPvLiihGe~D~~Vp~~~s~~l~~~l 378 (454)
.... ...+.. ..+ . .. .. ......+.+.. +|++|++|+.|..+|.+.++.+.+.+
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~pvlii~G~~D~~~p~~~~~~~~~~~ 290 (326)
T KOG1454|consen 211 KVVYTDPSRLLEKLLHLLSRPVKEHFHRDARLSLFLELLGFDENLLSLIKKIWKCPVLIIWGDKDQIVPLELAEELKKKL 290 (326)
T ss_pred eeeccccccchhhhhhheecccccchhhhheeeEEEeccCccchHHHhhccccCCceEEEEcCcCCccCHHHHHHHHhhC
Confidence 0000 000000 000 0 00 00 01111233344 79999999999999999888877766
Q ss_pred HHcCCCEEEEEeCCCCccccccCCCCCCcHHHHHHHHHHHHHhc
Q 012898 379 QRVGVRAESILYEGKTHTDLFLQDPMRGGKDDMFEDIVAIIHAD 422 (454)
Q Consensus 379 ~~~g~~vel~~~~g~~H~~~~l~~p~~~~~~~~~~~i~~Fl~~~ 422 (454)
.++++++++++||. ..+. ..+++.+.|..|+.+.
T Consensus 291 ----pn~~~~~I~~~gH~-~h~e-----~Pe~~~~~i~~Fi~~~ 324 (326)
T KOG1454|consen 291 ----PNAELVEIPGAGHL-PHLE-----RPEEVAALLRSFIARL 324 (326)
T ss_pred ----CCceEEEeCCCCcc-cccC-----CHHHHHHHHHHHHHHh
Confidence 37999999999998 4444 4589999999999875
No 89
>PRK05855 short chain dehydrogenase; Validated
Probab=99.26 E-value=8.5e-11 Score=126.22 Aligned_cols=62 Identities=15% Similarity=0.130 Sum_probs=48.4
Q ss_pred CCCCEEEEEeCCCCCCChHHHHHHHHHHHHcCCCEEEEEeCCCCccccccCCCCCCcHHHHHHHHHHHHHhcC
Q 012898 351 LLPPIILFHGTADYSIPADASKNFANTLQRVGVRAESILYEGKTHTDLFLQDPMRGGKDDMFEDIVAIIHADD 423 (454)
Q Consensus 351 ~~pPvLiihGe~D~~Vp~~~s~~l~~~l~~~g~~vel~~~~g~~H~~~~l~~p~~~~~~~~~~~i~~Fl~~~~ 423 (454)
...|+++++|++|.++|.+..+.+++.+. ..++++++ +||. .++.+| +++.+.|.+|+.+..
T Consensus 232 ~~~P~lii~G~~D~~v~~~~~~~~~~~~~----~~~~~~~~-~gH~-~~~e~p-----~~~~~~i~~fl~~~~ 293 (582)
T PRK05855 232 TDVPVQLIVPTGDPYVRPALYDDLSRWVP----RLWRREIK-AGHW-LPMSHP-----QVLAAAVAEFVDAVE 293 (582)
T ss_pred ccCceEEEEeCCCcccCHHHhccccccCC----cceEEEcc-CCCc-chhhCh-----hHHHHHHHHHHHhcc
Confidence 45799999999999999988888876554 45777776 5897 444444 788899999998754
No 90
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=99.25 E-value=4.3e-10 Score=112.60 Aligned_cols=189 Identities=15% Similarity=0.180 Sum_probs=111.8
Q ss_pred CCcEEEEEcCCCccCCcccchhHHHHHHHhC--CcEEEEEecCCCC----CCChhHHHHHHHHHHHHHHHhhhhcCCCCC
Q 012898 202 PKPVVAFITGGAWIIGYKAWGSLLGQQLSER--DIIVACIDYRNFP----QGTIKDMVKDASQGISFVCNNISEYGGDPD 275 (454)
Q Consensus 202 ~~Pvvv~~HGgg~~~g~~~~~~~~~~~la~~--G~~Vv~~dyr~~~----~~~~~~~~~D~~~al~~l~~~~~~~g~d~~ 275 (454)
..|+|||+|||||..+.....-.....+.+. ...+++.||.+.. ...+|.++.+..+.+++|.+.. ..+
T Consensus 121 ~DpVlIYlHGGGY~l~~~p~qi~~L~~i~~~l~~~SILvLDYsLt~~~~~~~~yPtQL~qlv~~Y~~Lv~~~-----G~~ 195 (374)
T PF10340_consen 121 SDPVLIYLHGGGYFLGTTPSQIEFLLNIYKLLPEVSILVLDYSLTSSDEHGHKYPTQLRQLVATYDYLVESE-----GNK 195 (374)
T ss_pred CCcEEEEEcCCeeEecCCHHHHHHHHHHHHHcCCCeEEEEeccccccccCCCcCchHHHHHHHHHHHHHhcc-----CCC
Confidence 4699999999999887665332222222211 6799999999988 6678999999999999998532 236
Q ss_pred cEEEEEcCchHHHHHHHHHHHHHhhhC-----CCCCcccchhhh------hhhccccCCCCCC---hhhh-hcCCcc---
Q 012898 276 RIYLMGQSAGAHIAACTLLEQAIKETG-----EGESTTWSVSQI------RAYFGLSGGIMDG---EESL-RQYSPE--- 337 (454)
Q Consensus 276 rI~l~G~S~GG~la~~~a~~~~~~~~~-----~~~~~~~~~~~i------~~~~~~~g~~~~~---~~~~-~~~~p~--- 337 (454)
+|.|+|+|+||++++.++..-...... ......|..... ..+..-....+.. ...+ +.+.+.
T Consensus 196 nI~LmGDSAGGnL~Ls~LqyL~~~~~~~~Pk~~iLISPWv~l~~~~~~~~~~~~~n~~~D~l~~~~~~~~~~~y~~~~~~ 275 (374)
T PF10340_consen 196 NIILMGDSAGGNLALSFLQYLKKPNKLPYPKSAILISPWVNLVPQDSQEGSSYHDNEKRDMLSYKGLSMFGDAYIGNNDP 275 (374)
T ss_pred eEEEEecCccHHHHHHHHHHHhhcCCCCCCceeEEECCCcCCcCCCCCCCccccccccccccchhhHHHHHHhhcccccc
Confidence 899999999999999887653221110 001111110000 0000000000000 0000 011110
Q ss_pred -cc---------cC---CCccccccCCCCCEEEEEeCCCCCCChHHHHHHHHHHHHcCC-----CEEEEEeCCCCcccc
Q 012898 338 -VL---------VQ---DPNTRHAVSLLPPIILFHGTADYSIPADASKNFANTLQRVGV-----RAESILYEGKTHTDL 398 (454)
Q Consensus 338 -~~---------~~---~~~~~~~~~~~pPvLiihGe~D~~Vp~~~s~~l~~~l~~~g~-----~vel~~~~g~~H~~~ 398 (454)
.. .. ...+.++.+ ..-++++.||++.+ .++.+++++.+.+.+. ..+..+.+++.|...
T Consensus 276 ~~~~~~~~~~n~~~n~d~~~W~~I~~-~~~vfVi~Ge~Evf--rddI~~~~~~~~~~~~~~~~~~~nv~~~~~G~Hi~P 351 (374)
T PF10340_consen 276 ENDLNSLPFVNIEYNFDAEDWKDILK-KYSVFVIYGEDEVF--RDDILEWAKKLNDVKPNKFSNSNNVYIDEGGIHIGP 351 (374)
T ss_pred ccccccCCccCcccCCChhHHHHhcc-CCcEEEEECCcccc--HHHHHHHHHHHhhcCccccCCcceEEEecCCccccc
Confidence 00 00 011222322 24799999999955 8999999999986543 378888999999843
No 91
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=99.23 E-value=2e-11 Score=121.50 Aligned_cols=120 Identities=25% Similarity=0.243 Sum_probs=76.3
Q ss_pred cccceeeceeccCCCC--eeEEEEeeCCCCCCCcEEEEEcCCCccC----Ccc-----------cchhHHHHHHHhCCcE
Q 012898 173 FSSQVRRGIVYGDQPR--NRLDLYFPKSSDGPKPVVAFITGGAWII----GYK-----------AWGSLLGQQLSERDII 235 (454)
Q Consensus 173 ~~~~~~~~v~y~~~~~--~~l~vy~P~~~~~~~Pvvv~~HGgg~~~----g~~-----------~~~~~~~~~la~~G~~ 235 (454)
......+.+.+...+. ....+++|++..++.|+||++||-|... |.. .....++..|+++||+
T Consensus 83 rdGY~~EKv~f~~~p~~~vpaylLvPd~~~~p~PAVL~lHgHg~~Ke~~~g~~gv~~~~~~~~~~~~~~~g~~LAk~GYV 162 (390)
T PF12715_consen 83 RDGYTREKVEFNTTPGSRVPAYLLVPDGAKGPFPAVLCLHGHGGGKEKMAGEDGVSPDLKDDYDDPKQDYGDQLAKRGYV 162 (390)
T ss_dssp ETTEEEEEEEE--STTB-EEEEEEEETT--S-EEEEEEE--TT--HHHHCT---SSGCG--STTSTTT-HHHHHHTTTSE
T ss_pred cCCeEEEEEEEEccCCeeEEEEEEecCCCCCCCCEEEEeCCCCCCcccccCCcccccccchhhccccccHHHHHHhCCCE
Confidence 3344455566554444 4677888998778999999999965211 110 1123478999999999
Q ss_pred EEEEecCCCCCCChh---------------------------HHHHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCchHHH
Q 012898 236 VACIDYRNFPQGTIK---------------------------DMVKDASQGISFVCNNISEYGGDPDRIYLMGQSAGAHI 288 (454)
Q Consensus 236 Vv~~dyr~~~~~~~~---------------------------~~~~D~~~al~~l~~~~~~~g~d~~rI~l~G~S~GG~l 288 (454)
|+++|-.++|+.... ....|...+++||..... +|++||+++|+|+||..
T Consensus 163 vla~D~~g~GER~~~e~~~~~~~~~~~~la~~~l~lG~S~~G~~~~ddmr~lDfL~slpe---VD~~RIG~~GfSmGg~~ 239 (390)
T PF12715_consen 163 VLAPDALGFGERGDMEGAAQGSNYDCQALARNLLMLGRSLAGLMAWDDMRALDFLASLPE---VDPDRIGCMGFSMGGYR 239 (390)
T ss_dssp EEEE--TTSGGG-SSCCCTTTTS--HHHHHHHHHHTT--HHHHHHHHHHHHHHHHCT-TT---EEEEEEEEEEEGGGHHH
T ss_pred EEEEccccccccccccccccccchhHHHHHHHHHHcCcCHHHHHHHHHHHHHHHHhcCcc---cCccceEEEeecccHHH
Confidence 999999887643210 123466678888887653 89999999999999999
Q ss_pred HHHHHHH
Q 012898 289 AACTLLE 295 (454)
Q Consensus 289 a~~~a~~ 295 (454)
++.+++-
T Consensus 240 a~~LaAL 246 (390)
T PF12715_consen 240 AWWLAAL 246 (390)
T ss_dssp HHHHHHH
T ss_pred HHHHHHc
Confidence 9988765
No 92
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=99.22 E-value=2.4e-10 Score=135.69 Aligned_cols=210 Identities=17% Similarity=0.133 Sum_probs=120.0
Q ss_pred CCcEEEEEcCCCccCCcccchhHHHHHHHhCCcEEEEEecCCCCCCChhH--------HHHHHHHHHHHHHHhhhhcCCC
Q 012898 202 PKPVVAFITGGAWIIGYKAWGSLLGQQLSERDIIVACIDYRNFPQGTIKD--------MVKDASQGISFVCNNISEYGGD 273 (454)
Q Consensus 202 ~~Pvvv~~HGgg~~~g~~~~~~~~~~~la~~G~~Vv~~dyr~~~~~~~~~--------~~~D~~~al~~l~~~~~~~g~d 273 (454)
..|+|||+||.+ ++...|..+...|.+ +|.|+++|+|+++.+..+. ...+.....+++.+.+...+
T Consensus 1370 ~~~~vVllHG~~---~s~~~w~~~~~~L~~-~~rVi~~Dl~G~G~S~~~~~~~~~~~~~~~si~~~a~~l~~ll~~l~-- 1443 (1655)
T PLN02980 1370 EGSVVLFLHGFL---GTGEDWIPIMKAISG-SARCISIDLPGHGGSKIQNHAKETQTEPTLSVELVADLLYKLIEHIT-- 1443 (1655)
T ss_pred CCCeEEEECCCC---CCHHHHHHHHHHHhC-CCEEEEEcCCCCCCCCCccccccccccccCCHHHHHHHHHHHHHHhC--
Confidence 467999999954 444455667777754 5999999999998765321 01112223333333333333
Q ss_pred CCcEEEEEcCchHHHHHHHHHHHHHhhhCCCCCc---ccchhh---hh--------hhccccCC-----CCCChh-----
Q 012898 274 PDRIYLMGQSAGAHIAACTLLEQAIKETGEGEST---TWSVSQ---IR--------AYFGLSGG-----IMDGEE----- 329 (454)
Q Consensus 274 ~~rI~l~G~S~GG~la~~~a~~~~~~~~~~~~~~---~~~~~~---i~--------~~~~~~g~-----~~~~~~----- 329 (454)
.+++.|+||||||.+++.++.+++.......... ...... +. ..+...+. .+....
T Consensus 1444 ~~~v~LvGhSmGG~iAl~~A~~~P~~V~~lVlis~~p~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~ 1523 (1655)
T PLN02980 1444 PGKVTLVGYSMGARIALYMALRFSDKIEGAVIISGSPGLKDEVARKIRSAKDDSRARMLIDHGLEIFLENWYSGELWKSL 1523 (1655)
T ss_pred CCCEEEEEECHHHHHHHHHHHhChHhhCEEEEECCCCccCchHHHHHHhhhhhHHHHHHHhhhHHHHHHHhccHHHhhhh
Confidence 4589999999999999999988765533221100 000000 00 00000000 000000
Q ss_pred --------hhh----cCCcccc---------cCCC-ccccccCCCCCEEEEEeCCCCCCChHHHHHHHHHHHHcC-----
Q 012898 330 --------SLR----QYSPEVL---------VQDP-NTRHAVSLLPPIILFHGTADYSIPADASKNFANTLQRVG----- 382 (454)
Q Consensus 330 --------~~~----~~~p~~~---------~~~~-~~~~~~~~~pPvLiihGe~D~~Vp~~~s~~l~~~l~~~g----- 382 (454)
.+. ....... .... ..........|+|+++|++|..++ +.+.++.+.+.+..
T Consensus 1524 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dl~~~L~~I~~PtLlI~Ge~D~~~~-~~a~~~~~~i~~a~~~~~~ 1602 (1655)
T PLN02980 1524 RNHPHFNKIVASRLLHKDVPSLAKLLSDLSIGRQPSLWEDLKQCDTPLLLVVGEKDVKFK-QIAQKMYREIGKSKESGND 1602 (1655)
T ss_pred ccCHHHHHHHHHHHhcCCHHHHHHHHHHhhhcccchHHHHHhhCCCCEEEEEECCCCccH-HHHHHHHHHcccccccccc
Confidence 000 0000000 0000 012234456799999999999875 66777777765421
Q ss_pred ---CCEEEEEeCCCCccccccCCCCCCcHHHHHHHHHHHHHhcCh
Q 012898 383 ---VRAESILYEGKTHTDLFLQDPMRGGKDDMFEDIVAIIHADDQ 424 (454)
Q Consensus 383 ---~~vel~~~~g~~H~~~~l~~p~~~~~~~~~~~i~~Fl~~~~~ 424 (454)
..+++++++++||. .++++| +++.+.|.+||.+...
T Consensus 1603 ~~~~~a~lvvI~~aGH~-~~lE~P-----e~f~~~I~~FL~~~~~ 1641 (1655)
T PLN02980 1603 KGKEIIEIVEIPNCGHA-VHLENP-----LPVIRALRKFLTRLHN 1641 (1655)
T ss_pred ccccceEEEEECCCCCc-hHHHCH-----HHHHHHHHHHHHhccc
Confidence 13689999999997 555545 8899999999998653
No 93
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=99.17 E-value=1.6e-09 Score=109.05 Aligned_cols=233 Identities=13% Similarity=0.192 Sum_probs=142.3
Q ss_pred eceeccCCCCeeEEEEeeCCC-----CCCCcEEEEEcCCCccCCccc-chhHHHHHHHhCCcEEEEEecCCCCCCChh--
Q 012898 179 RGIVYGDQPRNRLDLYFPKSS-----DGPKPVVAFITGGAWIIGYKA-WGSLLGQQLSERDIIVACIDYRNFPQGTIK-- 250 (454)
Q Consensus 179 ~~v~y~~~~~~~l~vy~P~~~-----~~~~Pvvv~~HGgg~~~g~~~-~~~~~~~~la~~G~~Vv~~dyr~~~~~~~~-- 250 (454)
+-+.+.+++...++++.+... +...|+||++||-.+ ++.+ +...++..+.++||.||++|.||++.....
T Consensus 96 eii~~~DGG~~~lDW~~~~~~~~~~~~~~~P~vvilpGltg--~S~~~YVr~lv~~a~~~G~r~VVfN~RG~~g~~LtTp 173 (409)
T KOG1838|consen 96 EIIKTSDGGTVTLDWVENPDSRCRTDDGTDPIVVILPGLTG--GSHESYVRHLVHEAQRKGYRVVVFNHRGLGGSKLTTP 173 (409)
T ss_pred EEEEeCCCCEEEEeeccCcccccCCCCCCCcEEEEecCCCC--CChhHHHHHHHHHHHhCCcEEEEECCCCCCCCccCCC
Confidence 334455666678999987653 356799999999532 3333 334577777788999999999997766542
Q ss_pred -----HHHHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCchHHHHHHHHHHHHHhhhCC---CCCcccchhhhhhhccccC
Q 012898 251 -----DMVKDASQGISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLLEQAIKETGE---GESTTWSVSQIRAYFGLSG 322 (454)
Q Consensus 251 -----~~~~D~~~al~~l~~~~~~~g~d~~rI~l~G~S~GG~la~~~a~~~~~~~~~~---~~~~~~~~~~i~~~~~~~g 322 (454)
...+|+..+++++++.. ...+++.+|.|+||++...++.+...+.... .....|........+....
T Consensus 174 r~f~ag~t~Dl~~~v~~i~~~~-----P~a~l~avG~S~Gg~iL~nYLGE~g~~~~l~~a~~v~~Pwd~~~~~~~~~~~~ 248 (409)
T KOG1838|consen 174 RLFTAGWTEDLREVVNHIKKRY-----PQAPLFAVGFSMGGNILTNYLGEEGDNTPLIAAVAVCNPWDLLAASRSIETPL 248 (409)
T ss_pred ceeecCCHHHHHHHHHHHHHhC-----CCCceEEEEecchHHHHHHHhhhccCCCCceeEEEEeccchhhhhhhHHhccc
Confidence 34789999999999863 4458999999999999999998765443111 1111222110000000000
Q ss_pred C----------------------CCC---------ChhhhhcCC-------------cccccCCCccccccCCCCCEEEE
Q 012898 323 G----------------------IMD---------GEESLRQYS-------------PEVLVQDPNTRHAVSLLPPIILF 358 (454)
Q Consensus 323 ~----------------------~~~---------~~~~~~~~~-------------p~~~~~~~~~~~~~~~~pPvLii 358 (454)
. ..+ ....+.+++ .+.+...+....+.+...|+|++
T Consensus 249 ~~~~y~~~l~~~l~~~~~~~r~~~~~~~vd~d~~~~~~SvreFD~~~t~~~~gf~~~deYY~~aSs~~~v~~I~VP~L~i 328 (409)
T KOG1838|consen 249 YRRFYNRALTLNLKRIVLRHRHTLFEDPVDFDVILKSRSVREFDEALTRPMFGFKSVDEYYKKASSSNYVDKIKVPLLCI 328 (409)
T ss_pred chHHHHHHHHHhHHHHHhhhhhhhhhccchhhhhhhcCcHHHHHhhhhhhhcCCCcHHHHHhhcchhhhcccccccEEEE
Confidence 0 000 000011110 11222333345566667799999
Q ss_pred EeCCCCCCChHHHHHHHHHHHHcCCCEEEEEeCCCCccccccCCCCCCcHHHHHHH-HHHHHHhcC
Q 012898 359 HGTADYSIPADASKNFANTLQRVGVRAESILYEGKTHTDLFLQDPMRGGKDDMFED-IVAIIHADD 423 (454)
Q Consensus 359 hGe~D~~Vp~~~s~~l~~~l~~~g~~vel~~~~g~~H~~~~l~~p~~~~~~~~~~~-i~~Fl~~~~ 423 (454)
+..+|+++|.+ +.-..+ + .++.++-+.+-..+||..++.. .......++++ +.+|+..-.
T Consensus 329 na~DDPv~p~~-~ip~~~-~-~~np~v~l~~T~~GGHlgfleg--~~p~~~~w~~~~l~ef~~~~~ 389 (409)
T KOG1838|consen 329 NAADDPVVPEE-AIPIDD-I-KSNPNVLLVITSHGGHLGFLEG--LWPSARTWMDKLLVEFLGNAI 389 (409)
T ss_pred ecCCCCCCCcc-cCCHHH-H-hcCCcEEEEEeCCCceeeeecc--CCCccchhHHHHHHHHHHHHH
Confidence 99999999865 222222 2 2345888999999999966544 21244556666 777776543
No 94
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=99.16 E-value=3.7e-10 Score=114.23 Aligned_cols=216 Identities=16% Similarity=0.163 Sum_probs=116.1
Q ss_pred ceeccCCCCeeEEEEeeCCCCCCCcEEEEEcCCCccCCcccchh-HHHHHHHhCCcEEEEEecCCCCCCC-hhHHHHH--
Q 012898 180 GIVYGDQPRNRLDLYFPKSSDGPKPVVAFITGGAWIIGYKAWGS-LLGQQLSERDIIVACIDYRNFPQGT-IKDMVKD-- 255 (454)
Q Consensus 180 ~v~y~~~~~~~l~vy~P~~~~~~~Pvvv~~HGgg~~~g~~~~~~-~~~~~la~~G~~Vv~~dyr~~~~~~-~~~~~~D-- 255 (454)
.+.|.+ ..+...++.|. .+++.|+||++-| ..+....+. .+.+.++.+|+.++++|.++.|++. ++. -.|
T Consensus 169 ~iP~eg-~~I~g~LhlP~-~~~p~P~VIv~gG---lDs~qeD~~~l~~~~l~~rGiA~LtvDmPG~G~s~~~~l-~~D~~ 242 (411)
T PF06500_consen 169 EIPFEG-KTIPGYLHLPS-GEKPYPTVIVCGG---LDSLQEDLYRLFRDYLAPRGIAMLTVDMPGQGESPKWPL-TQDSS 242 (411)
T ss_dssp EEEETT-CEEEEEEEESS-SSS-EEEEEEE-----TTS-GGGGHHHHHCCCHHCT-EEEEE--TTSGGGTTT-S--S-CC
T ss_pred EEeeCC-cEEEEEEEcCC-CCCCCCEEEEeCC---cchhHHHHHHHHHHHHHhCCCEEEEEccCCCcccccCCC-CcCHH
Confidence 455544 55677788887 4678898888766 345555543 4456789999999999999987653 221 122
Q ss_pred --HHHHHHHHHHhhhhcCCCCCcEEEEEcCchHHHHHHHHHHHHHhhhCCC-----CCcccchhh-hhh--------hcc
Q 012898 256 --ASQGISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLLEQAIKETGEG-----ESTTWSVSQ-IRA--------YFG 319 (454)
Q Consensus 256 --~~~al~~l~~~~~~~g~d~~rI~l~G~S~GG~la~~~a~~~~~~~~~~~-----~~~~~~~~~-i~~--------~~~ 319 (454)
..++++|+.+.. .+|.+||+++|.|+||+.|..+|.-...+..+.+ ....+.... ... +-.
T Consensus 243 ~l~~aVLd~L~~~p---~VD~~RV~~~G~SfGGy~AvRlA~le~~RlkavV~~Ga~vh~~ft~~~~~~~~P~my~d~LA~ 319 (411)
T PF06500_consen 243 RLHQAVLDYLASRP---WVDHTRVGAWGFSFGGYYAVRLAALEDPRLKAVVALGAPVHHFFTDPEWQQRVPDMYLDVLAS 319 (411)
T ss_dssp HHHHHHHHHHHHST---TEEEEEEEEEEETHHHHHHHHHHHHTTTT-SEEEEES---SCGGH-HHHHTTS-HHHHHHHHH
T ss_pred HHHHHHHHHHhcCC---ccChhheEEEEeccchHHHHHHHHhcccceeeEeeeCchHhhhhccHHHHhcCCHHHHHHHHH
Confidence 456788887754 3799999999999999999998864332222110 000000000 000 000
Q ss_pred ccCCCCCChhh----hhcCCcccccCCCccccccCCCCCEEEEEeCCCCCCChHHHHHHHHHHHHcCCCEEEEEeCCCC-
Q 012898 320 LSGGIMDGEES----LRQYSPEVLVQDPNTRHAVSLLPPIILFHGTADYSIPADASKNFANTLQRVGVRAESILYEGKT- 394 (454)
Q Consensus 320 ~~g~~~~~~~~----~~~~~p~~~~~~~~~~~~~~~~pPvLiihGe~D~~Vp~~~s~~l~~~l~~~g~~vel~~~~g~~- 394 (454)
..|......+. +..++- ...-+-...+...|+|.+.|++|.++|.++.+.++.. +.+-+...++...
T Consensus 320 rlG~~~~~~~~l~~el~~~SL----k~qGlL~~rr~~~plL~i~~~~D~v~P~eD~~lia~~----s~~gk~~~~~~~~~ 391 (411)
T PF06500_consen 320 RLGMAAVSDESLRGELNKFSL----KTQGLLSGRRCPTPLLAINGEDDPVSPIEDSRLIAES----STDGKALRIPSKPL 391 (411)
T ss_dssp HCT-SCE-HHHHHHHGGGGST----TTTTTTTSS-BSS-EEEEEETT-SSS-HHHHHHHHHT----BTT-EEEEE-SSSH
T ss_pred HhCCccCCHHHHHHHHHhcCc----chhccccCCCCCcceEEeecCCCCCCCHHHHHHHHhc----CCCCceeecCCCcc
Confidence 00100000111 111111 0000000122335999999999999999998887763 4455666666544
Q ss_pred ccccccCCCCCCcHHHHHHHHHHHHHhc
Q 012898 395 HTDLFLQDPMRGGKDDMFEDIVAIIHAD 422 (454)
Q Consensus 395 H~~~~l~~p~~~~~~~~~~~i~~Fl~~~ 422 (454)
|. .-++.+..+.+||++.
T Consensus 392 ~~----------gy~~al~~~~~Wl~~~ 409 (411)
T PF06500_consen 392 HM----------GYPQALDEIYKWLEDK 409 (411)
T ss_dssp HH----------HHHHHHHHHHHHHHHH
T ss_pred cc----------chHHHHHHHHHHHHHh
Confidence 65 2368889999999864
No 95
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.15 E-value=1.6e-09 Score=103.71 Aligned_cols=213 Identities=21% Similarity=0.193 Sum_probs=125.2
Q ss_pred CeeEEEEeeCCCCCCCcEEEEEcCCCccCCcccchhH--HHHHHHhC-CcEEEEEe-cCCC------CCCCh----hHHH
Q 012898 188 RNRLDLYFPKSSDGPKPVVAFITGGAWIIGYKAWGSL--LGQQLSER-DIIVACID-YRNF------PQGTI----KDMV 253 (454)
Q Consensus 188 ~~~l~vy~P~~~~~~~Pvvv~~HGgg~~~g~~~~~~~--~~~~la~~-G~~Vv~~d-yr~~------~~~~~----~~~~ 253 (454)
+....+|.|....++.|+||++||++ ++...+.. -.+.+|++ ||.|+-+| |... +.... ...+
T Consensus 46 ~r~y~l~vP~g~~~~apLvv~LHG~~---~sgag~~~~sg~d~lAd~~gFlV~yPdg~~~~wn~~~~~~~~~p~~~~~g~ 122 (312)
T COG3509 46 KRSYRLYVPPGLPSGAPLVVVLHGSG---GSGAGQLHGTGWDALADREGFLVAYPDGYDRAWNANGCGNWFGPADRRRGV 122 (312)
T ss_pred ccceEEEcCCCCCCCCCEEEEEecCC---CChHHhhcccchhhhhcccCcEEECcCccccccCCCcccccCCcccccCCc
Confidence 34688999988666779999999965 33332222 22666666 99999884 3321 11111 2346
Q ss_pred HHHHHHHHHHHHhhhhcCCCCCcEEEEEcCchHHHHHHHHHHHHHhhhCCCCCccc-------chhhhhhhccccCCCCC
Q 012898 254 KDASQGISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLLEQAIKETGEGESTTW-------SVSQIRAYFGLSGGIMD 326 (454)
Q Consensus 254 ~D~~~al~~l~~~~~~~g~d~~rI~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~-------~~~~i~~~~~~~g~~~~ 326 (454)
+|+....+.+.+...+|++|+.||+|.|.|.||.++..++..++............ .+......+...|.
T Consensus 123 ddVgflr~lva~l~~~~gidp~RVyvtGlS~GG~Ma~~lac~~p~~faa~A~VAg~~~~~~a~~~~rp~~~m~~~G~--- 199 (312)
T COG3509 123 DDVGFLRALVAKLVNEYGIDPARVYVTGLSNGGRMANRLACEYPDIFAAIAPVAGLLALGVACTPPRPVSVMAFHGT--- 199 (312)
T ss_pred cHHHHHHHHHHHHHHhcCcCcceEEEEeeCcHHHHHHHHHhcCcccccceeeeecccCCCcccCCCCchhHHHhcCC---
Confidence 77777777777778899999999999999999999999998865544332111110 01111111111110
Q ss_pred ChhhhhcCCcccccCCCccccccCCCCCEEEEEeCCCCCCChHHHHHHHHHHHHc-----------------------CC
Q 012898 327 GEESLRQYSPEVLVQDPNTRHAVSLLPPIILFHGTADYSIPADASKNFANTLQRV-----------------------GV 383 (454)
Q Consensus 327 ~~~~~~~~~p~~~~~~~~~~~~~~~~pPvLiihGe~D~~Vp~~~s~~l~~~l~~~-----------------------g~ 383 (454)
.++ ...-.....| |.||..|.+|+..+..+....+... +.
T Consensus 200 --------------~Dp-~~p~~gG~~~--~g~g~~~~~v~~~~~~~~Waa~ng~~~~p~~~~~~~~~~~~~~~~~~~~~ 262 (312)
T COG3509 200 --------------ADP-LNPYHGGGVP--IGRGQRDGVVSAADLAARWAAVNGCQAGPDTAELPDVGDGTDYDTCDGNA 262 (312)
T ss_pred --------------CCC-CCCCCCCCcc--cccccccccccHHHHHHHHHHhcCCCCCCcccccCCCcccceeeccCCCc
Confidence 000 0111112223 7888888887555555444444322 23
Q ss_pred CEEEEEeCCCCccccccCCC-------CCCcHHHHHHHHHHHHHhcCh
Q 012898 384 RAESILYEGKTHTDLFLQDP-------MRGGKDDMFEDIVAIIHADDQ 424 (454)
Q Consensus 384 ~vel~~~~g~~H~~~~l~~p-------~~~~~~~~~~~i~~Fl~~~~~ 424 (454)
.++++.+.|+||.+.. .+. +....-...+.|.+|+..+.+
T Consensus 263 ~V~~y~i~g~GH~wp~-~~~~~~~~~g~~t~~~dat~~iw~Ff~~~~R 309 (312)
T COG3509 263 RVELYTIDGGGHTWPG-GTQYGPAALGMSTRGFDATERIWRFFRQHRR 309 (312)
T ss_pred ceEEEEEeCCcccCcC-CCCCCcccccccccCcchHHHHHHHHHhccc
Confidence 4899999999998542 111 011112356778888887654
No 96
>KOG4667 consensus Predicted esterase [Lipid transport and metabolism]
Probab=99.14 E-value=4.4e-10 Score=102.54 Aligned_cols=196 Identities=14% Similarity=0.181 Sum_probs=116.8
Q ss_pred CCCcEEEEEcCCCccCCccc--chhHHHHHHHhCCcEEEEEecCCCCCCC-------hhHHHHHHHHHHHHHHHhhhhcC
Q 012898 201 GPKPVVAFITGGAWIIGYKA--WGSLLGQQLSERDIIVACIDYRNFPQGT-------IKDMVKDASQGISFVCNNISEYG 271 (454)
Q Consensus 201 ~~~Pvvv~~HGgg~~~g~~~--~~~~~~~~la~~G~~Vv~~dyr~~~~~~-------~~~~~~D~~~al~~l~~~~~~~g 271 (454)
+..-++|+.||- ..++. ....++..+++.|+-++.+|+++.+++. +....+|....++++...
T Consensus 31 gs~e~vvlcHGf---rS~Kn~~~~~~vA~~~e~~gis~fRfDF~GnGeS~gsf~~Gn~~~eadDL~sV~q~~s~~----- 102 (269)
T KOG4667|consen 31 GSTEIVVLCHGF---RSHKNAIIMKNVAKALEKEGISAFRFDFSGNGESEGSFYYGNYNTEADDLHSVIQYFSNS----- 102 (269)
T ss_pred CCceEEEEeecc---ccccchHHHHHHHHHHHhcCceEEEEEecCCCCcCCccccCcccchHHHHHHHHHHhccC-----
Confidence 344689999992 23332 3455888999999999999999987764 234458888888877652
Q ss_pred CCCCcEEEEEcCchHHHHHHHHHHHHHhhhCCCCCcccchhh-------------h--hhhccccC------CCCCChhh
Q 012898 272 GDPDRIYLMGQSAGAHIAACTLLEQAIKETGEGESTTWSVSQ-------------I--RAYFGLSG------GIMDGEES 330 (454)
Q Consensus 272 ~d~~rI~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~~-------------i--~~~~~~~g------~~~~~~~~ 330 (454)
+.-=-+|+|||-||.++..++....+......+...+.... + .+++.... ..+..+..
T Consensus 103 -nr~v~vi~gHSkGg~Vvl~ya~K~~d~~~viNcsGRydl~~~I~eRlg~~~l~~ike~Gfid~~~rkG~y~~rvt~eSl 181 (269)
T KOG4667|consen 103 -NRVVPVILGHSKGGDVVLLYASKYHDIRNVINCSGRYDLKNGINERLGEDYLERIKEQGFIDVGPRKGKYGYRVTEESL 181 (269)
T ss_pred -ceEEEEEEeecCccHHHHHHHHhhcCchheEEcccccchhcchhhhhcccHHHHHHhCCceecCcccCCcCceecHHHH
Confidence 11123689999999999999887544211111111000000 0 00110000 00000000
Q ss_pred hhcCCcccccCCCccccccCCCCCEEEEEeCCCCCCChHHHHHHHHHHHHcCCCEEEEEeCCCCccccccCCCCCCcHHH
Q 012898 331 LRQYSPEVLVQDPNTRHAVSLLPPIILFHGTADYSIPADASKNFANTLQRVGVRAESILYEGKTHTDLFLQDPMRGGKDD 410 (454)
Q Consensus 331 ~~~~~p~~~~~~~~~~~~~~~~pPvLiihGe~D~~Vp~~~s~~l~~~l~~~g~~vel~~~~g~~H~~~~l~~p~~~~~~~ 410 (454)
.+.+...... ........+|+|-+||..|.+||.+.+.+|++.++ ..+++++||++|++...+ .+
T Consensus 182 mdrLntd~h~----aclkId~~C~VLTvhGs~D~IVPve~AkefAk~i~----nH~L~iIEgADHnyt~~q-------~~ 246 (269)
T KOG4667|consen 182 MDRLNTDIHE----ACLKIDKQCRVLTVHGSEDEIVPVEDAKEFAKIIP----NHKLEIIEGADHNYTGHQ-------SQ 246 (269)
T ss_pred HHHHhchhhh----hhcCcCccCceEEEeccCCceeechhHHHHHHhcc----CCceEEecCCCcCccchh-------hh
Confidence 0111000000 01113446799999999999999999999999998 489999999999944433 34
Q ss_pred HHHHHHHHHH
Q 012898 411 MFEDIVAIIH 420 (454)
Q Consensus 411 ~~~~i~~Fl~ 420 (454)
.....+.|++
T Consensus 247 l~~lgl~f~k 256 (269)
T KOG4667|consen 247 LVSLGLEFIK 256 (269)
T ss_pred HhhhcceeEE
Confidence 4444455544
No 97
>KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only]
Probab=99.14 E-value=5.9e-10 Score=102.53 Aligned_cols=191 Identities=16% Similarity=0.278 Sum_probs=132.2
Q ss_pred eEEEEeeCCCCCCCcEEEEEcCCCccCCccc-chhHHHHHHHhCCcEEEEEecCCC-CCC---------------ChhHH
Q 012898 190 RLDLYFPKSSDGPKPVVAFITGGAWIIGYKA-WGSLLGQQLSERDIIVACIDYRNF-PQG---------------TIKDM 252 (454)
Q Consensus 190 ~l~vy~P~~~~~~~Pvvv~~HGgg~~~g~~~-~~~~~~~~la~~G~~Vv~~dyr~~-~~~---------------~~~~~ 252 (454)
.++-|+-.....+ -+||.|-- +.|... .....+..+|..||.|+.||+-.+ |.. ..+..
T Consensus 27 gldaYv~gs~~~~-~~li~i~D---vfG~~~~n~r~~Adk~A~~Gy~v~vPD~~~Gdp~~~~~~~~~~~~w~~~~~~~~~ 102 (242)
T KOG3043|consen 27 GLDAYVVGSTSSK-KVLIVIQD---VFGFQFPNTREGADKVALNGYTVLVPDFFRGDPWSPSLQKSERPEWMKGHSPPKI 102 (242)
T ss_pred CeeEEEecCCCCC-eEEEEEEe---eeccccHHHHHHHHHHhcCCcEEEcchhhcCCCCCCCCChhhhHHHHhcCCcccc
Confidence 3677777654444 45665554 233333 356688999999999999997543 111 12335
Q ss_pred HHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCchHHHHHHHHHHHHHhhhCCCCCcccchhhhhhhccccCCCCCChhhhh
Q 012898 253 VKDASQGISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLLEQAIKETGEGESTTWSVSQIRAYFGLSGGIMDGEESLR 332 (454)
Q Consensus 253 ~~D~~~al~~l~~~~~~~g~d~~rI~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~~ 332 (454)
..|+...++||+.+ ++..+|+++|+++||-++..+.... ..+.+.+...+....
T Consensus 103 ~~~i~~v~k~lk~~-----g~~kkIGv~GfCwGak~vv~~~~~~---------------~~f~a~v~~hps~~d------ 156 (242)
T KOG3043|consen 103 WKDITAVVKWLKNH-----GDSKKIGVVGFCWGAKVVVTLSAKD---------------PEFDAGVSFHPSFVD------ 156 (242)
T ss_pred hhHHHHHHHHHHHc-----CCcceeeEEEEeecceEEEEeeccc---------------hhheeeeEecCCcCC------
Confidence 77899999999965 6778999999999999887655431 134444444442111
Q ss_pred cCCcccccCCCccccccCCCCCEEEEEeCCCCCCChHHHHHHHHHHHHcCC-CEEEEEeCCCCccccc----cCCC-CCC
Q 012898 333 QYSPEVLVQDPNTRHAVSLLPPIILFHGTADYSIPADASKNFANTLQRVGV-RAESILYEGKTHTDLF----LQDP-MRG 406 (454)
Q Consensus 333 ~~~p~~~~~~~~~~~~~~~~pPvLiihGe~D~~Vp~~~s~~l~~~l~~~g~-~vel~~~~g~~H~~~~----l~~p-~~~ 406 (454)
..++.....|++++.|+.|..+|.....++.+.+++... ..++.+|+|.+|+|.. ...| ...
T Consensus 157 ------------~~D~~~vk~Pilfl~ae~D~~~p~~~v~~~ee~lk~~~~~~~~v~~f~g~~HGf~~~r~~~~~Ped~~ 224 (242)
T KOG3043|consen 157 ------------SADIANVKAPILFLFAELDEDVPPKDVKAWEEKLKENPAVGSQVKTFSGVGHGFVARRANISSPEDKK 224 (242)
T ss_pred ------------hhHHhcCCCCEEEEeecccccCCHHHHHHHHHHHhcCcccceeEEEcCCccchhhhhccCCCChhHHH
Confidence 123334457999999999999999999999999987532 3579999999999664 1222 344
Q ss_pred cHHHHHHHHHHHHHhc
Q 012898 407 GKDDMFEDIVAIIHAD 422 (454)
Q Consensus 407 ~~~~~~~~i~~Fl~~~ 422 (454)
..++.++.+++|+++.
T Consensus 225 ~~eea~~~~~~Wf~~y 240 (242)
T KOG3043|consen 225 AAEEAYQRFISWFKHY 240 (242)
T ss_pred HHHHHHHHHHHHHHHh
Confidence 5678888999999865
No 98
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=99.13 E-value=1.5e-09 Score=102.03 Aligned_cols=193 Identities=20% Similarity=0.272 Sum_probs=123.7
Q ss_pred CCCeeEEEEeeCCCCCCCcEEEEEcCCCccCCcccchhHHHHHHHhCCcEEEEEecCCCCCCChhHHHHHHHHHHHHHHH
Q 012898 186 QPRNRLDLYFPKSSDGPKPVVAFITGGAWIIGYKAWGSLLGQQLSERDIIVACIDYRNFPQGTIKDMVKDASQGISFVCN 265 (454)
Q Consensus 186 ~~~~~l~vy~P~~~~~~~Pvvv~~HGgg~~~g~~~~~~~~~~~la~~G~~Vv~~dyr~~~~~~~~~~~~D~~~al~~l~~ 265 (454)
.+-..+-|+.|.. ++..|+|+|+||- .-...+|..+.+.++++||+||+++.-..-.-.....+++....++|+.+
T Consensus 30 spPkpLlI~tP~~-~G~yPVilF~HG~---~l~ns~Ys~lL~HIASHGfIVVAPQl~~~~~p~~~~Ei~~aa~V~~WL~~ 105 (307)
T PF07224_consen 30 SPPKPLLIVTPSE-AGTYPVILFLHGF---NLYNSFYSQLLAHIASHGFIVVAPQLYTLFPPDGQDEIKSAASVINWLPE 105 (307)
T ss_pred CCCCCeEEecCCc-CCCccEEEEeech---hhhhHHHHHHHHHHhhcCeEEEechhhcccCCCchHHHHHHHHHHHHHHh
Confidence 3456799999976 5689999999993 23456788899999999999999996543222334567888899999998
Q ss_pred hhhhc-----CCCCCcEEEEEcCchHHHHHHHHHHHHHhhhCCCCCcccchhhhhhhccccCCCCCChhhhhcCCccccc
Q 012898 266 NISEY-----GGDPDRIYLMGQSAGAHIAACTLLEQAIKETGEGESTTWSVSQIRAYFGLSGGIMDGEESLRQYSPEVLV 340 (454)
Q Consensus 266 ~~~~~-----g~d~~rI~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~~~~~p~~~~ 340 (454)
.+..+ ..+.++++++|||.||..|..+|+.+. ....+.+.+++... .......+..|..+.
T Consensus 106 gL~~~Lp~~V~~nl~klal~GHSrGGktAFAlALg~a------------~~lkfsaLIGiDPV--~G~~k~~~t~P~iLt 171 (307)
T PF07224_consen 106 GLQHVLPENVEANLSKLALSGHSRGGKTAFALALGYA------------TSLKFSALIGIDPV--AGTSKGKQTPPPILT 171 (307)
T ss_pred hhhhhCCCCcccccceEEEeecCCccHHHHHHHhccc------------ccCchhheeccccc--CCCCCCCCCCCCeee
Confidence 86543 356679999999999999999988643 11234444444331 111111222222111
Q ss_pred CCCccccccCCCCCEEEEEeCCC-------CCCCh--HHHHHHHHHHHHcCCCEEEEEeCCCCccccccCC
Q 012898 341 QDPNTRHAVSLLPPIILFHGTAD-------YSIPA--DASKNFANTLQRVGVRAESILYEGKTHTDLFLQD 402 (454)
Q Consensus 341 ~~~~~~~~~~~~pPvLiihGe~D-------~~Vp~--~~s~~l~~~l~~~g~~vel~~~~g~~H~~~~l~~ 402 (454)
-.+ ...+...|+++|-...- ..+.+ -+-++|++.++. ++-..+..+-||.+....+
T Consensus 172 y~p---~SF~l~iPv~VIGtGLg~~~~~~~~~CaP~gvnH~eFf~eCk~---p~~hfV~~dYGHmDmLDD~ 236 (307)
T PF07224_consen 172 YVP---QSFDLDIPVLVIGTGLGPKRNPLFPPCAPDGVNHEEFFNECKP---PCAHFVAKDYGHMDMLDDD 236 (307)
T ss_pred cCC---cccccCCceEEEecCcCccccCCCCCCCCCCcCHHHHHHhhcc---cceeeeecccccccccccC
Confidence 111 11122358888765444 11111 145677776664 6777778888999765443
No 99
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.13 E-value=8.4e-10 Score=107.50 Aligned_cols=206 Identities=18% Similarity=0.233 Sum_probs=127.9
Q ss_pred CCCCcEEEEEcCCCccCCcccchhHHHHHHHhC-CcEEEEEecCCCCCCCh------hHHHHHHHHHHHHHHHhhhhcCC
Q 012898 200 DGPKPVVAFITGGAWIIGYKAWGSLLGQQLSER-DIIVACIDYRNFPQGTI------KDMVKDASQGISFVCNNISEYGG 272 (454)
Q Consensus 200 ~~~~Pvvv~~HGgg~~~g~~~~~~~~~~~la~~-G~~Vv~~dyr~~~~~~~------~~~~~D~~~al~~l~~~~~~~g~ 272 (454)
-.+.|.++++|| ..|+...+..++..|++. |-.|+++|-|.+|.++. ..+.+|+...++++....
T Consensus 49 ~~~~Pp~i~lHG---l~GS~~Nw~sv~k~Ls~~l~~~v~~vd~RnHG~Sp~~~~h~~~~ma~dv~~Fi~~v~~~~----- 120 (315)
T KOG2382|consen 49 LERAPPAIILHG---LLGSKENWRSVAKNLSRKLGRDVYAVDVRNHGSSPKITVHNYEAMAEDVKLFIDGVGGST----- 120 (315)
T ss_pred cCCCCceEEecc---cccCCCCHHHHHHHhcccccCceEEEecccCCCCccccccCHHHHHHHHHHHHHHccccc-----
Confidence 456789999999 678888999999999988 99999999999988763 456677777777665421
Q ss_pred CCCcEEEEEcCchH-HHHHHHHHHHHHhhhCCC----CC--cccch----hhhhhhcc--cc----CCCCC---------
Q 012898 273 DPDRIYLMGQSAGA-HIAACTLLEQAIKETGEG----ES--TTWSV----SQIRAYFG--LS----GGIMD--------- 326 (454)
Q Consensus 273 d~~rI~l~G~S~GG-~la~~~a~~~~~~~~~~~----~~--~~~~~----~~i~~~~~--~~----g~~~~--------- 326 (454)
-..++.|+|||||| .+++..+...+....... .. ..... ..+..... .. ....+
T Consensus 121 ~~~~~~l~GHsmGG~~~~m~~t~~~p~~~~rliv~D~sP~~~~~~~~e~~e~i~~m~~~d~~~~~~~~rke~~~~l~~~~ 200 (315)
T KOG2382|consen 121 RLDPVVLLGHSMGGVKVAMAETLKKPDLIERLIVEDISPGGVGRSYGEYRELIKAMIQLDLSIGVSRGRKEALKSLIEVG 200 (315)
T ss_pred ccCCceecccCcchHHHHHHHHHhcCcccceeEEEecCCccCCcccchHHHHHHHHHhccccccccccHHHHHHHHHHHh
Confidence 23479999999999 444444433332211110 00 00000 00111110 00 00000
Q ss_pred Chhhh-----hcCC--cc---------------cccC--CCc-cccc--cCCCCCEEEEEeCCCCCCChHHHHHHHHHHH
Q 012898 327 GEESL-----RQYS--PE---------------VLVQ--DPN-TRHA--VSLLPPIILFHGTADYSIPADASKNFANTLQ 379 (454)
Q Consensus 327 ~~~~~-----~~~~--p~---------------~~~~--~~~-~~~~--~~~~pPvLiihGe~D~~Vp~~~s~~l~~~l~ 379 (454)
....+ ..+. +. .+.. ... ..+. .....|+++++|.++..++.++-.++.+...
T Consensus 201 ~d~~~~~fi~~nl~~~~~~~s~~w~~nl~~i~~~~~~~~~~s~~~~l~~~~~~~pvlfi~g~~S~fv~~~~~~~~~~~fp 280 (315)
T KOG2382|consen 201 FDNLVRQFILTNLKKSPSDGSFLWRVNLDSIASLLDEYEILSYWADLEDGPYTGPVLFIKGLQSKFVPDEHYPRMEKIFP 280 (315)
T ss_pred cchHHHHHHHHhcCcCCCCCceEEEeCHHHHHHHHHHHHhhcccccccccccccceeEEecCCCCCcChhHHHHHHHhcc
Confidence 00000 0000 00 0000 000 0011 3445699999999999999988888888777
Q ss_pred HcCCCEEEEEeCCCCccccccCCCCCCcHHHHHHHHHHHHHhcC
Q 012898 380 RVGVRAESILYEGKTHTDLFLQDPMRGGKDDMFEDIVAIIHADD 423 (454)
Q Consensus 380 ~~g~~vel~~~~g~~H~~~~l~~p~~~~~~~~~~~i~~Fl~~~~ 423 (454)
.+++++++++||. +.+..| +++++.|.+|+.+++
T Consensus 281 ----~~e~~~ld~aGHw-Vh~E~P-----~~~~~~i~~Fl~~~~ 314 (315)
T KOG2382|consen 281 ----NVEVHELDEAGHW-VHLEKP-----EEFIESISEFLEEPE 314 (315)
T ss_pred ----chheeecccCCce-eecCCH-----HHHHHHHHHHhcccC
Confidence 5999999999996 777766 899999999998764
No 100
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.12 E-value=6.3e-10 Score=104.90 Aligned_cols=207 Identities=15% Similarity=0.119 Sum_probs=122.8
Q ss_pred eceeccCCCCe--eEEEEeeCCCCCCCcEEEEEcCCCccCCcccchhHHHHHHHhCCcEEEEEecCCCCCCC--------
Q 012898 179 RGIVYGDQPRN--RLDLYFPKSSDGPKPVVAFITGGAWIIGYKAWGSLLGQQLSERDIIVACIDYRNFPQGT-------- 248 (454)
Q Consensus 179 ~~v~y~~~~~~--~l~vy~P~~~~~~~Pvvv~~HGgg~~~g~~~~~~~~~~~la~~G~~Vv~~dyr~~~~~~-------- 248 (454)
-+++|.+-.+. +.-+.+|....++.|.||.+||-+...|.... .-.++..||.|+.+|.||-+.+.
T Consensus 57 ydvTf~g~~g~rI~gwlvlP~~~~~~~P~vV~fhGY~g~~g~~~~----~l~wa~~Gyavf~MdvRGQg~~~~dt~~~p~ 132 (321)
T COG3458 57 YDVTFTGYGGARIKGWLVLPRHEKGKLPAVVQFHGYGGRGGEWHD----MLHWAVAGYAVFVMDVRGQGSSSQDTADPPG 132 (321)
T ss_pred EEEEEeccCCceEEEEEEeecccCCccceEEEEeeccCCCCCccc----cccccccceeEEEEecccCCCccccCCCCCC
Confidence 46677665554 44566788777899999999994322222211 12456789999999999854331
Q ss_pred ---hh-----------------HHHHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCchHHHHHHHHHHHHHhhhCCCCCcc
Q 012898 249 ---IK-----------------DMVKDASQGISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLLEQAIKETGEGESTT 308 (454)
Q Consensus 249 ---~~-----------------~~~~D~~~al~~l~~~~~~~g~d~~rI~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~ 308 (454)
.+ ..+.|+..+++.+... ..+|.+||++.|.|.||.+++.++.-.+...........
T Consensus 133 ~~s~pG~mtrGilD~kd~yyyr~v~~D~~~ave~~~sl---~~vde~Ri~v~G~SqGGglalaaaal~~rik~~~~~~Pf 209 (321)
T COG3458 133 GPSDPGFMTRGILDRKDTYYYRGVFLDAVRAVEILASL---DEVDEERIGVTGGSQGGGLALAAAALDPRIKAVVADYPF 209 (321)
T ss_pred CCcCCceeEeecccCCCceEEeeehHHHHHHHHHHhcc---CccchhheEEeccccCchhhhhhhhcChhhhcccccccc
Confidence 11 1255777777766554 348999999999999999998877654333222211111
Q ss_pred cchhhhhhhccc--cCCCCCChhhhhcCCcccc--cCC----CccccccCCCCCEEEEEeCCCCCCChHHHHHHHHHHHH
Q 012898 309 WSVSQIRAYFGL--SGGIMDGEESLRQYSPEVL--VQD----PNTRHAVSLLPPIILFHGTADYSIPADASKNFANTLQR 380 (454)
Q Consensus 309 ~~~~~i~~~~~~--~g~~~~~~~~~~~~~p~~~--~~~----~~~~~~~~~~pPvLiihGe~D~~Vp~~~s~~l~~~l~~ 380 (454)
+ ..+.-.+.+ .+...+....++...+... ... ...+.+.+...|+|+..|-.|+++|+...-..++++..
T Consensus 210 l--~df~r~i~~~~~~~ydei~~y~k~h~~~e~~v~~TL~yfD~~n~A~RiK~pvL~svgL~D~vcpPstqFA~yN~l~~ 287 (321)
T COG3458 210 L--SDFPRAIELATEGPYDEIQTYFKRHDPKEAEVFETLSYFDIVNLAARIKVPVLMSVGLMDPVCPPSTQFAAYNALTT 287 (321)
T ss_pred c--ccchhheeecccCcHHHHHHHHHhcCchHHHHHHHHhhhhhhhHHHhhccceEEeecccCCCCCChhhHHHhhcccC
Confidence 0 111111111 1100000111111111100 000 00122334456999999999999999999999998864
Q ss_pred cCCCEEEEEeCCCCccc
Q 012898 381 VGVRAESILYEGKTHTD 397 (454)
Q Consensus 381 ~g~~vel~~~~g~~H~~ 397 (454)
.+++.+|+.-+|..
T Consensus 288 ---~K~i~iy~~~aHe~ 301 (321)
T COG3458 288 ---SKTIEIYPYFAHEG 301 (321)
T ss_pred ---CceEEEeecccccc
Confidence 67888998888973
No 101
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=99.11 E-value=4e-10 Score=110.06 Aligned_cols=202 Identities=15% Similarity=0.090 Sum_probs=116.0
Q ss_pred CCeeEEEEee-CCCCCCCcEEEEEcCCCccCCcccchh-------HHHHHHHhCCcEEEEEecCCCCCCC------hhHH
Q 012898 187 PRNRLDLYFP-KSSDGPKPVVAFITGGAWIIGYKAWGS-------LLGQQLSERDIIVACIDYRNFPQGT------IKDM 252 (454)
Q Consensus 187 ~~~~l~vy~P-~~~~~~~Pvvv~~HGgg~~~g~~~~~~-------~~~~~la~~G~~Vv~~dyr~~~~~~------~~~~ 252 (454)
..+..+||+| ....++.|+||..|+-+.......... .....++++||+||..|.|+.+.+. .+..
T Consensus 3 v~L~adv~~P~~~~~~~~P~il~~tpY~~~~~~~~~~~~~~~~~~~~~~~~~~~GY~vV~~D~RG~g~S~G~~~~~~~~e 82 (272)
T PF02129_consen 3 VRLAADVYRPGADGGGPFPVILTRTPYGKGDQTASDLAGANPGPPSARRPFAERGYAVVVQDVRGTGGSEGEFDPMSPNE 82 (272)
T ss_dssp -EEEEEEEEE--TTSSSEEEEEEEESSTCTC-HHHHHHTTCHHSHGGGHHHHHTT-EEEEEE-TTSTTS-S-B-TTSHHH
T ss_pred CEEEEEEEecCCCCCCcccEEEEccCcCCCCCcccchhhhhcccchhHHHHHhCCCEEEEECCcccccCCCccccCChhH
Confidence 3467899999 445678999999998542110111110 1112399999999999999976653 3456
Q ss_pred HHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCchHHHHHHHHHHHHHhhhCCCCCcccchhhhhh-hccccCC--------
Q 012898 253 VKDASQGISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLLEQAIKETGEGESTTWSVSQIRA-YFGLSGG-------- 323 (454)
Q Consensus 253 ~~D~~~al~~l~~~~~~~g~d~~rI~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~~i~~-~~~~~g~-------- 323 (454)
..|..++++|+.+.. ....||+++|.|.+|..++.+|...+........... ...+.. .+.-.|.
T Consensus 83 ~~D~~d~I~W~~~Qp----ws~G~VGm~G~SY~G~~q~~~A~~~~p~LkAi~p~~~--~~d~~~~~~~~gG~~~~~~~~~ 156 (272)
T PF02129_consen 83 AQDGYDTIEWIAAQP----WSNGKVGMYGISYGGFTQWAAAARRPPHLKAIVPQSG--WSDLYRDSIYPGGAFRLGFFAG 156 (272)
T ss_dssp HHHHHHHHHHHHHCT----TEEEEEEEEEETHHHHHHHHHHTTT-TTEEEEEEESE---SBTCCTSSEETTEEBCCHHHH
T ss_pred HHHHHHHHHHHHhCC----CCCCeEEeeccCHHHHHHHHHHhcCCCCceEEEeccc--CCcccccchhcCCcccccchhH
Confidence 889999999998863 3446999999999999999998854332211100000 000000 0000000
Q ss_pred --------------CCCCh--------------hhhhcCCc---------------ccccCCCccccccCCCCCEEEEEe
Q 012898 324 --------------IMDGE--------------ESLRQYSP---------------EVLVQDPNTRHAVSLLPPIILFHG 360 (454)
Q Consensus 324 --------------~~~~~--------------~~~~~~~p---------------~~~~~~~~~~~~~~~~pPvLiihG 360 (454)
..... ........ ..+..........+...|+|++.|
T Consensus 157 w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~i~vP~l~v~G 236 (272)
T PF02129_consen 157 WEDLQSQQEDPQSRPAPDRDYLRERARYEALGDSPLGRLPRDPPYWDEWLDHPPYDPFWQERSPSERLDKIDVPVLIVGG 236 (272)
T ss_dssp HHHHHHHHHHHTCCCCSSSHHHHHHHHHHCHHHHHHHHCHGGTHHHHHHHHT-SSSHHHHTTBHHHHHGG--SEEEEEEE
T ss_pred HHHHHHHhhcccCCCchhhhhhhhhhhhhhhhhHHHhhhccccHHHHHHHhCCCcCHHHHhCChHHHHhhCCCCEEEecc
Confidence 00000 00000000 000011111223556679999999
Q ss_pred CCCCCCChHHHHHHHHHHHHcC-CCEEEEEeCCCCcc
Q 012898 361 TADYSIPADASKNFANTLQRVG-VRAESILYEGKTHT 396 (454)
Q Consensus 361 e~D~~Vp~~~s~~l~~~l~~~g-~~vel~~~~g~~H~ 396 (454)
-.|.... ..+.+.++++++.+ .+.++++-|. +|+
T Consensus 237 w~D~~~~-~~~~~~~~~l~~~~~~~~~Liigpw-~H~ 271 (272)
T PF02129_consen 237 WYDTLFL-RGALRAYEALRAPGSKPQRLIIGPW-THG 271 (272)
T ss_dssp TTCSSTS-HHHHHHHHHHCTTSTC-EEEEEESE-STT
T ss_pred cCCcccc-hHHHHHHHHhhcCCCCCCEEEEeCC-CCC
Confidence 9996665 89999999999887 6778888886 675
No 102
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=99.08 E-value=5.5e-09 Score=107.75 Aligned_cols=191 Identities=18% Similarity=0.155 Sum_probs=111.1
Q ss_pred CeeEEEEeeCCC-CCCCcEEEEEcCCCccCCcccchhHHHHHHHhCC----cEEEEEecCCCCC----CC-hhHHHHHH-
Q 012898 188 RNRLDLYFPKSS-DGPKPVVAFITGGAWIIGYKAWGSLLGQQLSERD----IIVACIDYRNFPQ----GT-IKDMVKDA- 256 (454)
Q Consensus 188 ~~~l~vy~P~~~-~~~~Pvvv~~HGgg~~~g~~~~~~~~~~~la~~G----~~Vv~~dyr~~~~----~~-~~~~~~D~- 256 (454)
...+.||+|.+. .++.|+|+++||..|.... ........|.+.| .++|.+|...... .. .......+
T Consensus 193 ~r~v~VY~P~~y~~~~~PvlyllDG~~w~~~~--~~~~~ld~li~~g~i~P~ivV~id~~~~~~R~~el~~~~~f~~~l~ 270 (411)
T PRK10439 193 SRRVWIYTTGDAAPEERPLAILLDGQFWAESM--PVWPALDSLTHRGQLPPAVYLLIDAIDTTHRSQELPCNADFWLAVQ 270 (411)
T ss_pred ceEEEEEECCCCCCCCCCEEEEEECHHhhhcC--CHHHHHHHHHHcCCCCceEEEEECCCCcccccccCCchHHHHHHHH
Confidence 357889999753 4578999999998775322 2223445555555 5678887521111 11 11111111
Q ss_pred HHHHHHHHHhhhhcCCCCCcEEEEEcCchHHHHHHHHHHHHHhhhCCCCCcccchhhhhhhccccCCCCCChhhhhcCCc
Q 012898 257 SQGISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLLEQAIKETGEGESTTWSVSQIRAYFGLSGGIMDGEESLRQYSP 336 (454)
Q Consensus 257 ~~al~~l~~~~~~~g~d~~rI~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~~~~~p 336 (454)
...+-||.++. ....|+++.+|+|+|+||..|+.+++++++. +..++.++|........ ....
T Consensus 271 ~eLlP~I~~~y-~~~~d~~~~~IaG~S~GGl~AL~~al~~Pd~--------------Fg~v~s~Sgs~ww~~~~--~~~~ 333 (411)
T PRK10439 271 QELLPQVRAIA-PFSDDADRTVVAGQSFGGLAALYAGLHWPER--------------FGCVLSQSGSFWWPHRG--GQQE 333 (411)
T ss_pred HHHHHHHHHhC-CCCCCccceEEEEEChHHHHHHHHHHhCccc--------------ccEEEEeccceecCCcc--CCch
Confidence 23344555432 2235888999999999999999999986544 33333444321100000 0000
Q ss_pred ccccCCCccccccCCCCCEEEEEeCCCCCCChHHHHHHHHHHHHcCCCEEEEEeCCCCccccc
Q 012898 337 EVLVQDPNTRHAVSLLPPIILFHGTADYSIPADASKNFANTLQRVGVRAESILYEGKTHTDLF 399 (454)
Q Consensus 337 ~~~~~~~~~~~~~~~~pPvLiihGe~D~~Vp~~~s~~l~~~l~~~g~~vel~~~~g~~H~~~~ 399 (454)
..+...............++|-+|+.|..+ ++..+++++.|++.|.++++.+++| ||.+..
T Consensus 334 ~~l~~~l~~~~~~~~~lr~~i~~G~~E~~~-~~~~~~l~~~L~~~G~~~~~~~~~G-GHd~~~ 394 (411)
T PRK10439 334 GVLLEQLKAGEVSARGLRIVLEAGRREPMI-MRANQALYAQLHPAGHSVFWRQVDG-GHDALC 394 (411)
T ss_pred hHHHHHHHhcccCCCCceEEEeCCCCCchH-HHHHHHHHHHHHHCCCcEEEEECCC-CcCHHH
Confidence 000000000000111225888999998653 6788999999999999999999998 797443
No 103
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=99.08 E-value=4e-09 Score=113.24 Aligned_cols=106 Identities=19% Similarity=0.159 Sum_probs=78.8
Q ss_pred CCeeEEEEeeCCCCCCCcEEEEEcCCCccCCc-ccchhHHHHHHHhCCcEEEEEecCCCCCCCh------hHHHHHHHHH
Q 012898 187 PRNRLDLYFPKSSDGPKPVVAFITGGAWIIGY-KAWGSLLGQQLSERDIIVACIDYRNFPQGTI------KDMVKDASQG 259 (454)
Q Consensus 187 ~~~~l~vy~P~~~~~~~Pvvv~~HGgg~~~g~-~~~~~~~~~~la~~G~~Vv~~dyr~~~~~~~------~~~~~D~~~a 259 (454)
..+..++|+|++ .++.|+||++||.+...+. ..........|+++||.|+++|+|+++.+.. ....+|+.++
T Consensus 7 ~~L~~~~~~P~~-~~~~P~Il~~~gyg~~~~~~~~~~~~~~~~l~~~Gy~vv~~D~RG~g~S~g~~~~~~~~~~~D~~~~ 85 (550)
T TIGR00976 7 TRLAIDVYRPAG-GGPVPVILSRTPYGKDAGLRWGLDKTEPAWFVAQGYAVVIQDTRGRGASEGEFDLLGSDEAADGYDL 85 (550)
T ss_pred CEEEEEEEecCC-CCCCCEEEEecCCCCchhhccccccccHHHHHhCCcEEEEEeccccccCCCceEecCcccchHHHHH
Confidence 345677899975 4578999999996532210 1122235678999999999999999876542 4567899999
Q ss_pred HHHHHHhhhhcCCCCCcEEEEEcCchHHHHHHHHHHHH
Q 012898 260 ISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLLEQA 297 (454)
Q Consensus 260 l~~l~~~~~~~g~d~~rI~l~G~S~GG~la~~~a~~~~ 297 (454)
++|+.++. + .+ .+|+++|+|+||.+++.++...+
T Consensus 86 i~~l~~q~--~-~~-~~v~~~G~S~GG~~a~~~a~~~~ 119 (550)
T TIGR00976 86 VDWIAKQP--W-CD-GNVGMLGVSYLAVTQLLAAVLQP 119 (550)
T ss_pred HHHHHhCC--C-CC-CcEEEEEeChHHHHHHHHhccCC
Confidence 99998762 1 23 69999999999999999887654
No 104
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=99.07 E-value=4.7e-09 Score=103.48 Aligned_cols=65 Identities=20% Similarity=0.341 Sum_probs=53.8
Q ss_pred CCEEEEEeCCCCCCChHHHHHHHHHHHHcC-CCEEEEEeCCCCccccccCCCCCCcHHHHHHHHHHHHHhcChhh
Q 012898 353 PPIILFHGTADYSIPADASKNFANTLQRVG-VRAESILYEGKTHTDLFLQDPMRGGKDDMFEDIVAIIHADDQEA 426 (454)
Q Consensus 353 pPvLiihGe~D~~Vp~~~s~~l~~~l~~~g-~~vel~~~~g~~H~~~~l~~p~~~~~~~~~~~i~~Fl~~~~~~~ 426 (454)
.|++|.||..|.+||+..++++++.+.+.| .+++++.+++.+|..... .-....++||.++....
T Consensus 220 ~Pv~i~~g~~D~vvP~~~~~~l~~~~c~~G~a~V~~~~~~~~~H~~~~~---------~~~~~a~~Wl~~rf~G~ 285 (290)
T PF03583_consen 220 VPVLIYQGTADEVVPPADTDALVAKWCAAGGADVEYVRYPGGGHLGAAF---------ASAPDALAWLDDRFAGK 285 (290)
T ss_pred CCEEEEecCCCCCCChHHHHHHHHHHHHcCCCCEEEEecCCCChhhhhh---------cCcHHHHHHHHHHHCCC
Confidence 499999999999999999999999999999 799999999999973322 23366677887765443
No 105
>COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism]
Probab=99.04 E-value=3.7e-09 Score=109.38 Aligned_cols=228 Identities=15% Similarity=0.137 Sum_probs=152.1
Q ss_pred eceeccCCCCeeEEEEee-CC-CCCCCcEEEEEcCCCccCCcccchhHHHHHHHhCCcEEEEEecCCCCCCCh-------
Q 012898 179 RGIVYGDQPRNRLDLYFP-KS-SDGPKPVVAFITGGAWIIGYKAWGSLLGQQLSERDIIVACIDYRNFPQGTI------- 249 (454)
Q Consensus 179 ~~v~y~~~~~~~l~vy~P-~~-~~~~~Pvvv~~HGgg~~~g~~~~~~~~~~~la~~G~~Vv~~dyr~~~~~~~------- 249 (454)
++....+.++.++..|+- ++ ...+.|++||-.||-.+.-........ ..+.++|-+.|..|.||+++.+.
T Consensus 395 eQ~~atSkDGT~IPYFiv~K~~~~d~~pTll~aYGGF~vsltP~fs~~~-~~WLerGg~~v~ANIRGGGEfGp~WH~Aa~ 473 (648)
T COG1505 395 EQFFATSKDGTRIPYFIVRKGAKKDENPTLLYAYGGFNISLTPRFSGSR-KLWLERGGVFVLANIRGGGEFGPEWHQAGM 473 (648)
T ss_pred EEEEEEcCCCccccEEEEecCCcCCCCceEEEeccccccccCCccchhh-HHHHhcCCeEEEEecccCCccCHHHHHHHh
Confidence 444444555555554444 44 223789999999975444444443334 88889999999999999887652
Q ss_pred ----hHHHHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCchHHHHHHHHHHHHHhhhCCCCCcccchhhhhhhcc------
Q 012898 250 ----KDMVKDASQGISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLLEQAIKETGEGESTTWSVSQIRAYFG------ 319 (454)
Q Consensus 250 ----~~~~~D~~~al~~l~~~~~~~g~d~~rI~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~~i~~~~~------ 319 (454)
....+|..++.++|.++-- ..|++++|.|-|.||.++..++.++++..-...+.... ..+-.+..
T Consensus 474 k~nrq~vfdDf~AVaedLi~rgi---tspe~lgi~GgSNGGLLvg~alTQrPelfgA~v~evPl--lDMlRYh~l~aG~s 548 (648)
T COG1505 474 KENKQNVFDDFIAVAEDLIKRGI---TSPEKLGIQGGSNGGLLVGAALTQRPELFGAAVCEVPL--LDMLRYHLLTAGSS 548 (648)
T ss_pred hhcchhhhHHHHHHHHHHHHhCC---CCHHHhhhccCCCCceEEEeeeccChhhhCceeeccch--hhhhhhcccccchh
Confidence 1247889998888877521 37889999999999999998888877765544333321 22222222
Q ss_pred ---ccCC--CCCChhhhhcCCcccccCCCccccccCCCCCEEEEEeCCCCCCChHHHHHHHHHHHHcCCCEEEEEeCCCC
Q 012898 320 ---LSGG--IMDGEESLRQYSPEVLVQDPNTRHAVSLLPPIILFHGTADYSIPADASKNFANTLQRVGVRAESILYEGKT 394 (454)
Q Consensus 320 ---~~g~--~~~~~~~~~~~~p~~~~~~~~~~~~~~~~pPvLiihGe~D~~Vp~~~s~~l~~~l~~~g~~vel~~~~g~~ 394 (454)
-+|. ..+....+.+++|-..... ...-||+||..+++|..|-+.++++|+.+|++.|.++-+++--++|
T Consensus 549 W~~EYG~Pd~P~d~~~l~~YSPy~nl~~------g~kYP~~LITTs~~DDRVHPaHarKfaa~L~e~~~pv~~~e~t~gG 622 (648)
T COG1505 549 WIAEYGNPDDPEDRAFLLAYSPYHNLKP------GQKYPPTLITTSLHDDRVHPAHARKFAAKLQEVGAPVLLREETKGG 622 (648)
T ss_pred hHhhcCCCCCHHHHHHHHhcCchhcCCc------cccCCCeEEEcccccccccchHHHHHHHHHHhcCCceEEEeecCCc
Confidence 2221 1122334566666543322 1345899999999999999999999999999999999999999999
Q ss_pred ccccccCCCCCCcHHHHHHHHHHHHHhc
Q 012898 395 HTDLFLQDPMRGGKDDMFEDIVAIIHAD 422 (454)
Q Consensus 395 H~~~~l~~p~~~~~~~~~~~i~~Fl~~~ 422 (454)
|..-- |.. ...+....+..||.+.
T Consensus 623 H~g~~---~~~-~~A~~~a~~~afl~r~ 646 (648)
T COG1505 623 HGGAA---PTA-EIARELADLLAFLLRT 646 (648)
T ss_pred ccCCC---ChH-HHHHHHHHHHHHHHHh
Confidence 98332 211 2234455666777664
No 106
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=99.04 E-value=4e-10 Score=101.74 Aligned_cols=199 Identities=13% Similarity=0.081 Sum_probs=122.4
Q ss_pred EEEEEcCCCccCCcccchhHHHHHHHhC-CcEEEEEecCCCCCCChhH-------HHHHHHHHHHHHHHhhhhcCCCCCc
Q 012898 205 VVAFITGGAWIIGYKAWGSLLGQQLSER-DIIVACIDYRNFPQGTIKD-------MVKDASQGISFVCNNISEYGGDPDR 276 (454)
Q Consensus 205 vvv~~HGgg~~~g~~~~~~~~~~~la~~-G~~Vv~~dyr~~~~~~~~~-------~~~D~~~al~~l~~~~~~~g~d~~r 276 (454)
.|+.+.|. ...+...+......+-+. .+.+|++|-++++.+..|+ ..+|...|++.++.. +-.+
T Consensus 44 ~iLlipGa--lGs~~tDf~pql~~l~k~l~~TivawDPpGYG~SrPP~Rkf~~~ff~~Da~~avdLM~aL------k~~~ 115 (277)
T KOG2984|consen 44 YILLIPGA--LGSYKTDFPPQLLSLFKPLQVTIVAWDPPGYGTSRPPERKFEVQFFMKDAEYAVDLMEAL------KLEP 115 (277)
T ss_pred eeEecccc--cccccccCCHHHHhcCCCCceEEEEECCCCCCCCCCCcccchHHHHHHhHHHHHHHHHHh------CCCC
Confidence 67778873 233444544444444444 5999999999998876543 367899999988773 5579
Q ss_pred EEEEEcCchHHHHHHHHHHHHHhhhCCCCC--------------------cccchhhhhhhccccCCCCCChhhhhcCC-
Q 012898 277 IYLMGQSAGAHIAACTLLEQAIKETGEGES--------------------TTWSVSQIRAYFGLSGGIMDGEESLRQYS- 335 (454)
Q Consensus 277 I~l~G~S~GG~la~~~a~~~~~~~~~~~~~--------------------~~~~~~~i~~~~~~~g~~~~~~~~~~~~~- 335 (454)
+.|+|+|-||..|+..|.+.+......... ..|....-+.+...+|. -.....|..+.
T Consensus 116 fsvlGWSdGgiTalivAak~~e~v~rmiiwga~ayvn~~~~ma~kgiRdv~kWs~r~R~P~e~~Yg~-e~f~~~wa~wvD 194 (277)
T KOG2984|consen 116 FSVLGWSDGGITALIVAAKGKEKVNRMIIWGAAAYVNHLGAMAFKGIRDVNKWSARGRQPYEDHYGP-ETFRTQWAAWVD 194 (277)
T ss_pred eeEeeecCCCeEEEEeeccChhhhhhheeecccceecchhHHHHhchHHHhhhhhhhcchHHHhcCH-HHHHHHHHHHHH
Confidence 999999999999999888765543221000 00111111111111110 00001111110
Q ss_pred cccc---cCCCc--cccccCCCCCEEEEEeCCCCCCChHHHHHHHHHHHHcCCCEEEEEeCCCCccccccCCCCCCcHHH
Q 012898 336 PEVL---VQDPN--TRHAVSLLPPIILFHGTADYSIPADASKNFANTLQRVGVRAESILYEGKTHTDLFLQDPMRGGKDD 410 (454)
Q Consensus 336 p~~~---~~~~~--~~~~~~~~pPvLiihGe~D~~Vp~~~s~~l~~~l~~~g~~vel~~~~g~~H~~~~l~~p~~~~~~~ 410 (454)
.... ..+-. -.......+|+||+||+.|+.++-.+..-+-..++ -.+++++|.++|. +.+. ..++
T Consensus 195 ~v~qf~~~~dG~fCr~~lp~vkcPtli~hG~kDp~~~~~hv~fi~~~~~----~a~~~~~peGkHn-~hLr-----ya~e 264 (277)
T KOG2984|consen 195 VVDQFHSFCDGRFCRLVLPQVKCPTLIMHGGKDPFCGDPHVCFIPVLKS----LAKVEIHPEGKHN-FHLR-----YAKE 264 (277)
T ss_pred HHHHHhhcCCCchHhhhcccccCCeeEeeCCcCCCCCCCCccchhhhcc----cceEEEccCCCcc-eeee-----chHH
Confidence 0000 00101 11234556799999999999998877776666554 5789999999998 5555 4589
Q ss_pred HHHHHHHHHHhc
Q 012898 411 MFEDIVAIIHAD 422 (454)
Q Consensus 411 ~~~~i~~Fl~~~ 422 (454)
+...+.+|+++.
T Consensus 265 Fnklv~dFl~~~ 276 (277)
T KOG2984|consen 265 FNKLVLDFLKST 276 (277)
T ss_pred HHHHHHHHHhcc
Confidence 999999999864
No 107
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.04 E-value=6.6e-09 Score=109.87 Aligned_cols=99 Identities=17% Similarity=0.139 Sum_probs=68.6
Q ss_pred CCCeeEEEEeeCCCCCCCcEEEEEcCCCccCCccc----chhHHHHHHHhCCcEEEEEecCCCCCCC----hhHH-HHHH
Q 012898 186 QPRNRLDLYFPKSSDGPKPVVAFITGGAWIIGYKA----WGSLLGQQLSERDIIVACIDYRNFPQGT----IKDM-VKDA 256 (454)
Q Consensus 186 ~~~~~l~vy~P~~~~~~~Pvvv~~HGgg~~~g~~~----~~~~~~~~la~~G~~Vv~~dyr~~~~~~----~~~~-~~D~ 256 (454)
++...+.-|.|.......+.||++||- .....- ....+.++|.++||.|+++|+|+.+... +.+. .+++
T Consensus 171 ~~~~eLi~Y~P~t~~~~~~PlLiVp~~--i~k~yilDL~p~~Slv~~L~~qGf~V~~iDwrgpg~s~~~~~~ddY~~~~i 248 (532)
T TIGR01838 171 NELFQLIQYEPTTETVHKTPLLIVPPW--INKYYILDLRPQNSLVRWLVEQGHTVFVISWRNPDASQADKTFDDYIRDGV 248 (532)
T ss_pred CCcEEEEEeCCCCCcCCCCcEEEECcc--cccceeeecccchHHHHHHHHCCcEEEEEECCCCCcccccCChhhhHHHHH
Confidence 344567788887654455678899993 222111 1235889999999999999999877543 2222 2357
Q ss_pred HHHHHHHHHhhhhcCCCCCcEEEEEcCchHHHHHH
Q 012898 257 SQGISFVCNNISEYGGDPDRIYLMGQSAGAHIAAC 291 (454)
Q Consensus 257 ~~al~~l~~~~~~~g~d~~rI~l~G~S~GG~la~~ 291 (454)
.++++.+.+.. +.+++.++|||+||.+++.
T Consensus 249 ~~al~~v~~~~-----g~~kv~lvG~cmGGtl~a~ 278 (532)
T TIGR01838 249 IAALEVVEAIT-----GEKQVNCVGYCIGGTLLST 278 (532)
T ss_pred HHHHHHHHHhc-----CCCCeEEEEECcCcHHHHH
Confidence 77888887642 3468999999999999744
No 108
>PRK07868 acyl-CoA synthetase; Validated
Probab=99.00 E-value=1.1e-08 Score=117.00 Aligned_cols=71 Identities=11% Similarity=0.147 Sum_probs=56.4
Q ss_pred cCCCCCEEEEEeCCCCCCChHHHHHHHHHHHHcCCCEEE-EEeCCCCccccccCCCCCCcHHHHHHHHHHHHHhcChhh
Q 012898 349 VSLLPPIILFHGTADYSIPADASKNFANTLQRVGVRAES-ILYEGKTHTDLFLQDPMRGGKDDMFEDIVAIIHADDQEA 426 (454)
Q Consensus 349 ~~~~pPvLiihGe~D~~Vp~~~s~~l~~~l~~~g~~vel-~~~~g~~H~~~~l~~p~~~~~~~~~~~i~~Fl~~~~~~~ 426 (454)
.+...|+|+++|++|.++|.+.++.+++.+. ..++ .+++++||..++.. ....++++..+.+||.++...+
T Consensus 294 ~~i~~P~L~i~G~~D~ivp~~~~~~l~~~i~----~a~~~~~~~~~GH~g~~~g---~~a~~~~wp~i~~wl~~~~~~~ 365 (994)
T PRK07868 294 ADITCPVLAFVGEVDDIGQPASVRGIRRAAP----NAEVYESLIRAGHFGLVVG---SRAAQQTWPTVADWVKWLEGDG 365 (994)
T ss_pred hhCCCCEEEEEeCCCCCCCHHHHHHHHHhCC----CCeEEEEeCCCCCEeeeec---hhhhhhhChHHHHHHHHhccCC
Confidence 4455799999999999999999999988764 3555 57789999866643 3355789999999999887544
No 109
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=98.97 E-value=1.2e-08 Score=93.90 Aligned_cols=181 Identities=17% Similarity=0.217 Sum_probs=98.7
Q ss_pred EEEEcCCCccCCcc-cchhHHHHHHHhCC--cEEEEEecCCCCCCChhHHHHHHHHHHHHHHHhhhhcCCCCCcEEEEEc
Q 012898 206 VAFITGGAWIIGYK-AWGSLLGQQLSERD--IIVACIDYRNFPQGTIKDMVKDASQGISFVCNNISEYGGDPDRIYLMGQ 282 (454)
Q Consensus 206 vv~~HGgg~~~g~~-~~~~~~~~~la~~G--~~Vv~~dyr~~~~~~~~~~~~D~~~al~~l~~~~~~~g~d~~rI~l~G~ 282 (454)
|+|+||-. .+.. .....+.+.+++.+ ..+.++++...+ ..+++.+.+.+++. .++.+.|+|.
T Consensus 2 ilYlHGF~--Ssp~S~Ka~~l~~~~~~~~~~~~~~~p~l~~~p-----------~~a~~~l~~~i~~~--~~~~~~liGS 66 (187)
T PF05728_consen 2 ILYLHGFN--SSPQSFKAQALKQYFAEHGPDIQYPCPDLPPFP-----------EEAIAQLEQLIEEL--KPENVVLIGS 66 (187)
T ss_pred eEEecCCC--CCCCCHHHHHHHHHHHHhCCCceEECCCCCcCH-----------HHHHHHHHHHHHhC--CCCCeEEEEE
Confidence 79999932 2222 22344667777765 455666554322 22344444444443 3345999999
Q ss_pred CchHHHHHHHHHHHHHhhhCCCCCcccchhhhhhhccccCCCCCChhhhhcCCcccccCCCcccc-ccCCCCCEEEEEeC
Q 012898 283 SAGAHIAACTLLEQAIKETGEGESTTWSVSQIRAYFGLSGGIMDGEESLRQYSPEVLVQDPNTRH-AVSLLPPIILFHGT 361 (454)
Q Consensus 283 S~GG~la~~~a~~~~~~~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~~~~~p~~~~~~~~~~~-~~~~~pPvLiihGe 361 (454)
|+||..|.+++.+...+.. ...+.......+..+++........+. ..+..........+.. ......++++++++
T Consensus 67 SlGG~~A~~La~~~~~~av-LiNPav~p~~~l~~~iG~~~~~~~~e~--~~~~~~~~~~l~~l~~~~~~~~~~~lvll~~ 143 (187)
T PF05728_consen 67 SLGGFYATYLAERYGLPAV-LINPAVRPYELLQDYIGEQTNPYTGES--YELTEEHIEELKALEVPYPTNPERYLVLLQT 143 (187)
T ss_pred ChHHHHHHHHHHHhCCCEE-EEcCCCCHHHHHHHhhCccccCCCCcc--ceechHhhhhcceEeccccCCCccEEEEEec
Confidence 9999999999877643331 112222223334444443211111100 0111111111111111 11222389999999
Q ss_pred CCCCCChHHHHHHHHHHHHcCCCEEEEEeCCCCccccccCCCCCCcHHHHHHHHHHHH
Q 012898 362 ADYSIPADASKNFANTLQRVGVRAESILYEGKTHTDLFLQDPMRGGKDDMFEDIVAII 419 (454)
Q Consensus 362 ~D~~Vp~~~s~~l~~~l~~~g~~vel~~~~g~~H~~~~l~~p~~~~~~~~~~~i~~Fl 419 (454)
.|++++++.+...++ .+..++.+|++|.+. ..++.+..|++|+
T Consensus 144 ~DEvLd~~~a~~~~~-------~~~~~i~~ggdH~f~--------~f~~~l~~i~~f~ 186 (187)
T PF05728_consen 144 GDEVLDYREAVAKYR-------GCAQIIEEGGDHSFQ--------DFEEYLPQIIAFL 186 (187)
T ss_pred CCcccCHHHHHHHhc-------CceEEEEeCCCCCCc--------cHHHHHHHHHHhh
Confidence 999999866655554 234456788899832 3578889999986
No 110
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=98.97 E-value=5.3e-09 Score=98.51 Aligned_cols=166 Identities=17% Similarity=0.197 Sum_probs=83.6
Q ss_pred HHHHHHHHHHHhhhhcCCCCCcEEEEEcCchHHHHHHHHHHHHHhhhCC---CCCcccchhhhh-------hhccccCCC
Q 012898 255 DASQGISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLLEQAIKETGE---GESTTWSVSQIR-------AYFGLSGGI 324 (454)
Q Consensus 255 D~~~al~~l~~~~~~~g~d~~rI~l~G~S~GG~la~~~a~~~~~~~~~~---~~~~~~~~~~i~-------~~~~~~g~~ 324 (454)
=...|++||+++.. +++++|+|+|.|.||-+|+.++...+...... +....+...... .++......
T Consensus 5 yfe~Ai~~L~~~p~---v~~~~Igi~G~SkGaelALllAs~~~~i~avVa~~ps~~~~~~~~~~~~~~~~lp~~~~~~~~ 81 (213)
T PF08840_consen 5 YFEEAIDWLKSHPE---VDPDKIGIIGISKGAELALLLASRFPQISAVVAISPSSVVFQGIGFYRDSSKPLPYLPFDISK 81 (213)
T ss_dssp HHHHHHHHHHCSTT---B--SSEEEEEETHHHHHHHHHHHHSSSEEEEEEES--SB--SSEEEETTE--EE----B-GGG
T ss_pred HHHHHHHHHHhCCC---CCCCCEEEEEECHHHHHHHHHHhcCCCccEEEEeCCceeEecchhcccCCCccCCcCCcChhh
Confidence 35789999999864 77889999999999999999998865222111 000000000000 000000000
Q ss_pred --CCChh---hhhcCCccc-ccCCCccccccCCCCCEEEEEeCCCCCCCh-HHHHHHHHHHHHcCCC--EEEEEeCCCCc
Q 012898 325 --MDGEE---SLRQYSPEV-LVQDPNTRHAVSLLPPIILFHGTADYSIPA-DASKNFANTLQRVGVR--AESILYEGKTH 395 (454)
Q Consensus 325 --~~~~~---~~~~~~p~~-~~~~~~~~~~~~~~pPvLiihGe~D~~Vp~-~~s~~l~~~l~~~g~~--vel~~~~g~~H 395 (454)
..... ....+.... .......-.+.+...|+|+++|++|...|- +.++.+.++|++.|.+ ++++.|+++||
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~a~IpvE~i~~piLli~g~dD~~WpS~~~a~~i~~rL~~~~~~~~~~~l~Y~~aGH 161 (213)
T PF08840_consen 82 FSWNEPGLLRSRYAFELADDKAVEEARIPVEKIKGPILLISGEDDQIWPSSEMAEQIEERLKAAGFPHNVEHLSYPGAGH 161 (213)
T ss_dssp -EE-TTS-EE-TT-B--TTTGGGCCCB--GGG--SEEEEEEETT-SSS-HHHHHHHHHHHHHCTT-----EEEEETTB-S
T ss_pred ceecCCcceehhhhhhcccccccccccccHHHcCCCEEEEEeCCCCccchHHHHHHHHHHHHHhCCCCcceEEEcCCCCc
Confidence 00000 000000000 000000112334567999999999999886 5666788889988765 88899999999
Q ss_pred cccccCCCCCC----------------------cHHHHHHHHHHHHHhcC
Q 012898 396 TDLFLQDPMRG----------------------GKDDMFEDIVAIIHADD 423 (454)
Q Consensus 396 ~~~~l~~p~~~----------------------~~~~~~~~i~~Fl~~~~ 423 (454)
....-..|... ...+.++++++||++++
T Consensus 162 ~i~~Py~P~~~~~~~~~~~~~~~~GG~~~~~a~A~~dsW~~~l~Fl~~~L 211 (213)
T PF08840_consen 162 LIEPPYFPHCRASYHKFIGTPLAWGGEPEAHAKAQEDSWKKILEFLRKHL 211 (213)
T ss_dssp ---STT-----EEEETTTTEEEE--B-HHHHHHHHHHHHHHHHHHHHHH-
T ss_pred eecCCCCCCcccccccccCCcccCCCChHHHHHHHHHHHHHHHHHHHHHh
Confidence 83321112111 24678999999999876
No 111
>KOG3101 consensus Esterase D [General function prediction only]
Probab=98.96 E-value=3.1e-09 Score=96.60 Aligned_cols=200 Identities=19% Similarity=0.282 Sum_probs=122.9
Q ss_pred CCeeEEEEeeCCC--CCCCcEEEEEcCCCccCCcccc---hhHHHHHHHhCCcEEEEEecC--CC---CC----------
Q 012898 187 PRNRLDLYFPKSS--DGPKPVVAFITGGAWIIGYKAW---GSLLGQQLSERDIIVACIDYR--NF---PQ---------- 246 (454)
Q Consensus 187 ~~~~l~vy~P~~~--~~~~Pvvv~~HGgg~~~g~~~~---~~~~~~~la~~G~~Vv~~dyr--~~---~~---------- 246 (454)
...+..||+|+.. .++.|++.|+-|- ..+... -..+.+..+++|++||.+|-. +. ++
T Consensus 26 c~Mtf~vylPp~a~~~k~~P~lf~LSGL---TCT~~Nfi~Ksg~qq~As~hgl~vV~PDTSPRG~~v~g~~eswDFG~GA 102 (283)
T KOG3101|consen 26 CSMTFGVYLPPDAPRGKRCPVLFYLSGL---TCTHENFIEKSGFQQQASKHGLAVVAPDTSPRGVEVAGDDESWDFGQGA 102 (283)
T ss_pred cceEEEEecCCCcccCCcCceEEEecCC---cccchhhHhhhhHHHhHhhcCeEEECCCCCCCccccCCCcccccccCCc
Confidence 3457899999863 3457999999994 233322 223445555669999999853 31 11
Q ss_pred CCh----hHHHHHHHHHHHHHHHhhh------hcCCCCCcEEEEEcCchHHHHHHHHHHHHHhhhCC--------CCCcc
Q 012898 247 GTI----KDMVKDASQGISFVCNNIS------EYGGDPDRIYLMGQSAGAHIAACTLLEQAIKETGE--------GESTT 308 (454)
Q Consensus 247 ~~~----~~~~~D~~~al~~l~~~~~------~~g~d~~rI~l~G~S~GG~la~~~a~~~~~~~~~~--------~~~~~ 308 (454)
+.. .+.+..--...+|+.+.+- ...+|+.++.|.||||||+-|+..++++..+.... +....
T Consensus 103 GFYvnAt~epw~~~yrMYdYv~kELp~~l~~~~~pld~~k~~IfGHSMGGhGAl~~~Lkn~~kykSvSAFAPI~NP~~cp 182 (283)
T KOG3101|consen 103 GFYVNATQEPWAKHYRMYDYVVKELPQLLNSANVPLDPLKVGIFGHSMGGHGALTIYLKNPSKYKSVSAFAPICNPINCP 182 (283)
T ss_pred eeEEecccchHhhhhhHHHHHHHHHHHHhccccccccchhcceeccccCCCceEEEEEcCcccccceeccccccCcccCc
Confidence 000 0112222345556655442 24589999999999999999998888766554322 22334
Q ss_pred cchhhhhhhccccCCCCCChhhhhcCCcccccCCCccccccCCCCCEEEEEeCCCCCCChHH--HHHHHHHHHHc-CCCE
Q 012898 309 WSVSQIRAYFGLSGGIMDGEESLRQYSPEVLVQDPNTRHAVSLLPPIILFHGTADYSIPADA--SKNFANTLQRV-GVRA 385 (454)
Q Consensus 309 ~~~~~i~~~~~~~g~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~pPvLiihGe~D~~Vp~~~--s~~l~~~l~~~-g~~v 385 (454)
|.-..+.++.+ +....|..+++..+..+.. ....-+||-+|+.|...+ ++ -+.+.++++.. ..++
T Consensus 183 WGqKAf~gYLG------~~ka~W~~yDat~lik~y~-----~~~~~ilIdqG~~D~Fl~-~qLlPe~l~~a~~~~~~~~v 250 (283)
T KOG3101|consen 183 WGQKAFTGYLG------DNKAQWEAYDATHLIKNYR-----GVGDDILIDQGAADNFLA-EQLLPENLLEACKATWQAPV 250 (283)
T ss_pred chHHHhhcccC------CChHHHhhcchHHHHHhcC-----CCCccEEEecCccchhhh-hhcChHHHHHHhhccccccE
Confidence 55455554444 3456777777766544332 111248999999998754 22 23455555433 2578
Q ss_pred EEEEeCCCCccccccC
Q 012898 386 ESILYEGKTHTDLFLQ 401 (454)
Q Consensus 386 el~~~~g~~H~~~~l~ 401 (454)
.++..+|-+|.+.++.
T Consensus 251 ~~r~~~gyDHSYyfIa 266 (283)
T KOG3101|consen 251 VFRLQEGYDHSYYFIA 266 (283)
T ss_pred EEEeecCCCcceeeeh
Confidence 9999999999966643
No 112
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=98.93 E-value=2.6e-08 Score=101.62 Aligned_cols=187 Identities=17% Similarity=0.160 Sum_probs=99.8
Q ss_pred CCCcEEEEEcCCCccCCcccchhHHHHHHHhCCcEEEEEecCCCCCC-------C-------------------h-----
Q 012898 201 GPKPVVAFITGGAWIIGYKAWGSLLGQQLSERDIIVACIDYRNFPQG-------T-------------------I----- 249 (454)
Q Consensus 201 ~~~Pvvv~~HGgg~~~g~~~~~~~~~~~la~~G~~Vv~~dyr~~~~~-------~-------------------~----- 249 (454)
++.|+|||-||- .|+...|..++..||++||+|+++|+|-.... . +
T Consensus 98 ~~~PvvIFSHGl---gg~R~~yS~~~~eLAS~GyVV~aieHrDgSa~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (379)
T PF03403_consen 98 GKFPVVIFSHGL---GGSRTSYSAICGELASHGYVVAAIEHRDGSAPATYFMRDGSGAEVEPYVVEYLEEEWIPLRDFDP 174 (379)
T ss_dssp S-EEEEEEE--T---T--TTTTHHHHHHHHHTT-EEEEE---SS-SSEEEE-SSHHHHHHT---------EEEE-----G
T ss_pred CCCCEEEEeCCC---CcchhhHHHHHHHHHhCCeEEEEeccCCCceeEEEeccCCCccccccccccccccceeccccccc
Confidence 679999999994 47888899999999999999999999953100 0 0
Q ss_pred h-----------HHHHHHHHHHHHHHHhh---------------hhc--CCCCCcEEEEEcCchHHHHHHHHHHHHHhhh
Q 012898 250 K-----------DMVKDASQGISFVCNNI---------------SEY--GGDPDRIYLMGQSAGAHIAACTLLEQAIKET 301 (454)
Q Consensus 250 ~-----------~~~~D~~~al~~l~~~~---------------~~~--g~d~~rI~l~G~S~GG~la~~~a~~~~~~~~ 301 (454)
. ....|+..+++.+.+.- ..+ .+|.++|+++|||.||..++.++.+.
T Consensus 175 ~~~~~~R~~QL~~R~~Ei~~~l~~L~~i~~G~~~~~~l~~~~~l~~~~grlD~~~i~~~GHSFGGATa~~~l~~d----- 249 (379)
T PF03403_consen 175 EEEFELRNAQLRQRVAEIQFVLDALEEINSGDPVENVLPSSFDLSQFKGRLDLSRIGLAGHSFGGATALQALRQD----- 249 (379)
T ss_dssp GGHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----SS--SS-GGGGTT-EEEEEEEEEEETHHHHHHHHHHHH------
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCccCHHHHhhhcchhheeeeecCchHHHHHHHHhhc-----
Confidence 0 01345666777665421 111 24678999999999999999877652
Q ss_pred CCCCCcccchhhhhhhccccCCCCCChhhhhcCCcccccCCCccccccCCCCCEEEEEeCCCCCCChHHHHHHHHHHHHc
Q 012898 302 GEGESTTWSVSQIRAYFGLSGGIMDGEESLRQYSPEVLVQDPNTRHAVSLLPPIILFHGTADYSIPADASKNFANTLQRV 381 (454)
Q Consensus 302 ~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~pPvLiihGe~D~~Vp~~~s~~l~~~l~~~ 381 (454)
..++..+.+.+.... +.... ......|+|+++.+.= . -......+.+ +...
T Consensus 250 ----------~r~~~~I~LD~W~~P-------l~~~~---------~~~i~~P~L~InSe~f-~-~~~~~~~~~~-~~~~ 300 (379)
T PF03403_consen 250 ----------TRFKAGILLDPWMFP-------LGDEI---------YSKIPQPLLFINSESF-Q-WWENIFRMKK-VISN 300 (379)
T ss_dssp ----------TT--EEEEES---TT-------S-GGG---------GGG--S-EEEEEETTT----HHHHHHHHT-T--T
T ss_pred ----------cCcceEEEeCCcccC-------CCccc---------ccCCCCCEEEEECccc-C-ChhhHHHHHH-Hhcc
Confidence 345555555542111 00000 0112349999988752 1 1223333333 3334
Q ss_pred CCCEEEEEeCCCCcccccc---CCC------C--------CCcHHHHHHHHHHHHHhcCh
Q 012898 382 GVRAESILYEGKTHTDLFL---QDP------M--------RGGKDDMFEDIVAIIHADDQ 424 (454)
Q Consensus 382 g~~vel~~~~g~~H~~~~l---~~p------~--------~~~~~~~~~~i~~Fl~~~~~ 424 (454)
+....+..+.|..|..+.. -.| + ....+...+.+++||+++..
T Consensus 301 ~~~~~~~ti~gt~H~s~sD~~ll~P~~l~~~~~~~g~~dp~~a~~i~~~~~l~FL~~~L~ 360 (379)
T PF03403_consen 301 NKESRMLTIKGTAHLSFSDFPLLSPWLLGKFLGLKGSIDPERALRINNRASLAFLRRHLG 360 (379)
T ss_dssp TS-EEEEEETT--GGGGSGGGGTS-HHHHHHTTSS-SS-HHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCcEEEEECCCcCCCcchhhhhhHHHHHHHhccccCcCHHHHHHHHHHHHHHHHHHhcC
Confidence 5577889999999985531 112 0 00134566778889998854
No 113
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=98.90 E-value=3.3e-08 Score=101.39 Aligned_cols=66 Identities=17% Similarity=0.180 Sum_probs=56.0
Q ss_pred CCCCCEEEEEeCCCCCCChHHHHHHHHHHHHcCCCEEEEEeCC-CCccccccCCCCCCcHHHHHHHHHHHHHh
Q 012898 350 SLLPPIILFHGTADYSIPADASKNFANTLQRVGVRAESILYEG-KTHTDLFLQDPMRGGKDDMFEDIVAIIHA 421 (454)
Q Consensus 350 ~~~pPvLiihGe~D~~Vp~~~s~~l~~~l~~~g~~vel~~~~g-~~H~~~~l~~p~~~~~~~~~~~i~~Fl~~ 421 (454)
....|+|+++|+.|.++|.+.++++++.++..+.+++++++++ .||. .++.+ .+++.+.|.+|+++
T Consensus 321 ~I~~PtLvI~G~~D~l~p~~~~~~la~~lp~~~~~a~l~~I~s~~GH~-~~le~-----p~~~~~~I~~FL~~ 387 (389)
T PRK06765 321 NIEANVLMIPCKQDLLQPPRYNYKMVDILQKQGKYAEVYEIESINGHM-AGVFD-----IHLFEKKIYEFLNR 387 (389)
T ss_pred cCCCCEEEEEeCCCCCCCHHHHHHHHHHhhhcCCCeEEEEECCCCCcc-hhhcC-----HHHHHHHHHHHHcc
Confidence 4567999999999999999999999999987666799999986 8997 44443 48899999999975
No 114
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=98.87 E-value=2e-08 Score=95.28 Aligned_cols=109 Identities=20% Similarity=0.330 Sum_probs=79.7
Q ss_pred eceeccCCCCeeEEEEeeCCCCCCCcEEEEEcCCCccCCcccchhHHHHHHHhC-CcEEEEEecCCCCCCCh--------
Q 012898 179 RGIVYGDQPRNRLDLYFPKSSDGPKPVVAFITGGAWIIGYKAWGSLLGQQLSER-DIIVACIDYRNFPQGTI-------- 249 (454)
Q Consensus 179 ~~v~y~~~~~~~l~vy~P~~~~~~~Pvvv~~HGgg~~~g~~~~~~~~~~~la~~-G~~Vv~~dyr~~~~~~~-------- 249 (454)
+++... +....+++|+-.......|++++.||||. +.-.+..+++.+... ...++++|.|++++...
T Consensus 51 edv~i~-~~~~t~n~Y~t~~~~t~gpil~l~HG~G~---S~LSfA~~a~el~s~~~~r~~a~DlRgHGeTk~~~e~dlS~ 126 (343)
T KOG2564|consen 51 EDVSID-GSDLTFNVYLTLPSATEGPILLLLHGGGS---SALSFAIFASELKSKIRCRCLALDLRGHGETKVENEDDLSL 126 (343)
T ss_pred cccccC-CCcceEEEEEecCCCCCccEEEEeecCcc---cchhHHHHHHHHHhhcceeEEEeeccccCccccCChhhcCH
Confidence 444443 33347888887665667899999999875 334556688888877 88889999999998764
Q ss_pred hHHHHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCchHHHHHHHHHHHH
Q 012898 250 KDMVKDASQGISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLLEQA 297 (454)
Q Consensus 250 ~~~~~D~~~al~~l~~~~~~~g~d~~rI~l~G~S~GG~la~~~a~~~~ 297 (454)
.++..|+.+.++.+ ||-++.+|.|+||||||.+|.+.+....
T Consensus 127 eT~~KD~~~~i~~~------fge~~~~iilVGHSmGGaIav~~a~~k~ 168 (343)
T KOG2564|consen 127 ETMSKDFGAVIKEL------FGELPPQIILVGHSMGGAIAVHTAASKT 168 (343)
T ss_pred HHHHHHHHHHHHHH------hccCCCceEEEeccccchhhhhhhhhhh
Confidence 24566666555544 3345678999999999999988876643
No 115
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=98.85 E-value=5.5e-09 Score=100.32 Aligned_cols=187 Identities=21% Similarity=0.265 Sum_probs=103.6
Q ss_pred eeEEEEeeCC--CCCCCcEEEEEcC-CCccCCcccchhHHHHHHHhCC----cEEEEEecCCCC----------------
Q 012898 189 NRLDLYFPKS--SDGPKPVVAFITG-GAWIIGYKAWGSLLGQQLSERD----IIVACIDYRNFP---------------- 245 (454)
Q Consensus 189 ~~l~vy~P~~--~~~~~Pvvv~~HG-gg~~~g~~~~~~~~~~~la~~G----~~Vv~~dyr~~~---------------- 245 (454)
..+.||+|++ ..++.|||+++|| ++|... .........+.+.| .++|+++.....
T Consensus 8 ~~~~VylP~~y~~~~~~PvlylldG~~~~~~~--~~~~~~~~~~~~~~~~~~~iiV~i~~~~~~~~~~~~~~~~~~~~~~ 85 (251)
T PF00756_consen 8 RRVWVYLPPGYDPSKPYPVLYLLDGQSGWFRN--GNAQEALDRLIAEGKIPPMIIVVIPNGDNSRFYTSWYLPAGSSRRA 85 (251)
T ss_dssp EEEEEEECTTGGTTTTEEEEEEESHTTHHHHH--HHHHHHHHHHHHHHTSEEEEEEEEESSSTSSTTSBTTSSBCTTCBC
T ss_pred EEEEEEECCCCCCCCCCEEEEEccCCcccccc--chHHHHHHHHHHhCCCCceEEEEEeccccccccccccccccccccc
Confidence 4689999997 6778999999999 443211 11122333344443 566666654332
Q ss_pred -CCChhHHHHH--HHHHHHHHHHhhhhcCCCCCcEEEEEcCchHHHHHHHHHHHHHhhhCCCCCcccchhhhhhhccccC
Q 012898 246 -QGTIKDMVKD--ASQGISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLLEQAIKETGEGESTTWSVSQIRAYFGLSG 322 (454)
Q Consensus 246 -~~~~~~~~~D--~~~al~~l~~~~~~~g~d~~rI~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~~i~~~~~~~g 322 (454)
.......+.+ ....+.+|+++ |.+++++.+|+|+||||..|+.++.++++. +..++.++|
T Consensus 86 ~~~~~~~~~~~~l~~el~p~i~~~---~~~~~~~~~i~G~S~GG~~Al~~~l~~Pd~--------------F~~~~~~S~ 148 (251)
T PF00756_consen 86 DDSGGGDAYETFLTEELIPYIEAN---YRTDPDRRAIAGHSMGGYGALYLALRHPDL--------------FGAVIAFSG 148 (251)
T ss_dssp TSTTTHHHHHHHHHTHHHHHHHHH---SSEEECCEEEEEETHHHHHHHHHHHHSTTT--------------ESEEEEESE
T ss_pred ccCCCCcccceehhccchhHHHHh---cccccceeEEeccCCCcHHHHHHHHhCccc--------------cccccccCc
Confidence 0111122222 12455566654 456666699999999999999999986433 444444443
Q ss_pred CCCCChhhh--------hcCCcccccCCCccccccCCCCCEEEEEeCCCCCCC----------hHHHHHHHHHHHHcCCC
Q 012898 323 GIMDGEESL--------RQYSPEVLVQDPNTRHAVSLLPPIILFHGTADYSIP----------ADASKNFANTLQRVGVR 384 (454)
Q Consensus 323 ~~~~~~~~~--------~~~~p~~~~~~~~~~~~~~~~pPvLiihGe~D~~Vp----------~~~s~~l~~~l~~~g~~ 384 (454)
........| ....+...... ........++++..|+.|.... ......+.+.++..|.+
T Consensus 149 ~~~~~~~~w~~~~~~~~~~~~~~~~~~~---~~~~~~~~~i~l~~G~~d~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~ 225 (251)
T PF00756_consen 149 ALDPSPSLWGPSDDEAWKENDPFDLIKA---LSQKKKPLRIYLDVGTKDEFGGWEDSAQILQFLANNRELAQLLKAKGIP 225 (251)
T ss_dssp ESETTHCHHHHSTCGHHGGCHHHHHHHH---HHHTTSEEEEEEEEETTSTTHHCSHHHHHHHHHHHHHHHHHHCCCEECT
T ss_pred cccccccccCcCCcHHhhhccHHHHhhh---hhcccCCCeEEEEeCCCCcccccccCHHHHHHHHHhHhhHHHHHHcCCC
Confidence 111101111 11111100000 0011122378999999998321 23445555556667788
Q ss_pred EEEEEeCCCCcccc
Q 012898 385 AESILYEGKTHTDL 398 (454)
Q Consensus 385 vel~~~~g~~H~~~ 398 (454)
..+.+++| +|.+.
T Consensus 226 ~~~~~~~G-~H~~~ 238 (251)
T PF00756_consen 226 HTYHVFPG-GHDWA 238 (251)
T ss_dssp TESEEEHS-ESSHH
T ss_pred ceEEEecC-ccchh
Confidence 89999995 78743
No 116
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.83 E-value=5.8e-08 Score=91.13 Aligned_cols=201 Identities=15% Similarity=0.144 Sum_probs=118.1
Q ss_pred EEEEEcCCCccCCcccchhHHHHHHHhCCcEEEEEecCCCCCCChhHHHHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCc
Q 012898 205 VVAFITGGAWIIGYKAWGSLLGQQLSERDIIVACIDYRNFPQGTIKDMVKDASQGISFVCNNISEYGGDPDRIYLMGQSA 284 (454)
Q Consensus 205 vvv~~HGgg~~~g~~~~~~~~~~~la~~G~~Vv~~dyr~~~~~~~~~~~~D~~~al~~l~~~~~~~g~d~~rI~l~G~S~ 284 (454)
++.|=|-| |+...+..|...|-. .+.++.++|+|.+.......+.|+....+-+...+... .--...+++||||
T Consensus 10 L~cfP~AG----Gsa~~fr~W~~~lp~-~iel~avqlPGR~~r~~ep~~~di~~Lad~la~el~~~-~~d~P~alfGHSm 83 (244)
T COG3208 10 LFCFPHAG----GSASLFRSWSRRLPA-DIELLAVQLPGRGDRFGEPLLTDIESLADELANELLPP-LLDAPFALFGHSM 83 (244)
T ss_pred EEEecCCC----CCHHHHHHHHhhCCc-hhheeeecCCCcccccCCcccccHHHHHHHHHHHhccc-cCCCCeeecccch
Confidence 44444444 455566666665544 58999999999877765566677777777777665421 1224799999999
Q ss_pred hHHHHHHHHHHHHHhhhCC---CCCcccch--------------hhhhhhccccCC---CCCChhhhhcCCccccc----
Q 012898 285 GAHIAACTLLEQAIKETGE---GESTTWSV--------------SQIRAYFGLSGG---IMDGEESLRQYSPEVLV---- 340 (454)
Q Consensus 285 GG~la~~~a~~~~~~~~~~---~~~~~~~~--------------~~i~~~~~~~g~---~~~~~~~~~~~~p~~~~---- 340 (454)
||.+|..+|.+........ .......+ .-+.....+.|. ..++.+.+..+.|....
T Consensus 84 Ga~lAfEvArrl~~~g~~p~~lfisg~~aP~~~~~~~i~~~~D~~~l~~l~~lgG~p~e~led~El~~l~LPilRAD~~~ 163 (244)
T COG3208 84 GAMLAFEVARRLERAGLPPRALFISGCRAPHYDRGKQIHHLDDADFLADLVDLGGTPPELLEDPELMALFLPILRADFRA 163 (244)
T ss_pred hHHHHHHHHHHHHHcCCCcceEEEecCCCCCCcccCCccCCCHHHHHHHHHHhCCCChHHhcCHHHHHHHHHHHHHHHHH
Confidence 9999999987644332210 00000000 011111122221 22333333333332211
Q ss_pred -CCCccccccCCCCCEEEEEeCCCCCCChHHHHHHHHHHHHcCCCEEEEEeCCCCccccccCCCCCCcHHHHHHHHHHHH
Q 012898 341 -QDPNTRHAVSLLPPIILFHGTADYSIPADASKNFANTLQRVGVRAESILYEGKTHTDLFLQDPMRGGKDDMFEDIVAII 419 (454)
Q Consensus 341 -~~~~~~~~~~~~pPvLiihGe~D~~Vp~~~s~~l~~~l~~~g~~vel~~~~g~~H~~~~l~~p~~~~~~~~~~~i~~Fl 419 (454)
............+|+.++.|++|..|..++...+.+..+. ..++++++| ||.++. + ..+++++.|.+.+
T Consensus 164 ~e~Y~~~~~~pl~~pi~~~~G~~D~~vs~~~~~~W~~~t~~---~f~l~~fdG-gHFfl~-~-----~~~~v~~~i~~~l 233 (244)
T COG3208 164 LESYRYPPPAPLACPIHAFGGEKDHEVSRDELGAWREHTKG---DFTLRVFDG-GHFFLN-Q-----QREEVLARLEQHL 233 (244)
T ss_pred hcccccCCCCCcCcceEEeccCcchhccHHHHHHHHHhhcC---CceEEEecC-cceehh-h-----hHHHHHHHHHHHh
Confidence 1111222344567999999999999988888888876654 799999998 897332 1 3456666666666
Q ss_pred Hh
Q 012898 420 HA 421 (454)
Q Consensus 420 ~~ 421 (454)
..
T Consensus 234 ~~ 235 (244)
T COG3208 234 AH 235 (244)
T ss_pred hh
Confidence 53
No 117
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=98.80 E-value=7.8e-08 Score=95.11 Aligned_cols=211 Identities=16% Similarity=0.209 Sum_probs=122.7
Q ss_pred eEEEEeeCCC-CCCCcEEEEEcCCCccCCcccchhHHHHHHHhCCcEEEEEecCCCCCCCh------------------h
Q 012898 190 RLDLYFPKSS-DGPKPVVAFITGGAWIIGYKAWGSLLGQQLSERDIIVACIDYRNFPQGTI------------------K 250 (454)
Q Consensus 190 ~l~vy~P~~~-~~~~Pvvv~~HGgg~~~g~~~~~~~~~~~la~~G~~Vv~~dyr~~~~~~~------------------~ 250 (454)
.+.+..|+.. .+.+|++|.+.|.|- .+.......++..|.+.|+..+.+.-+.++.... .
T Consensus 78 ~~~~~~P~~~~~~~rp~~IhLagTGD-h~f~rR~~l~a~pLl~~gi~s~~le~Pyyg~RkP~~Q~~s~l~~VsDl~~~g~ 156 (348)
T PF09752_consen 78 RFQLLLPKRWDSPYRPVCIHLAGTGD-HGFWRRRRLMARPLLKEGIASLILENPYYGQRKPKDQRRSSLRNVSDLFVMGR 156 (348)
T ss_pred EEEEEECCccccCCCceEEEecCCCc-cchhhhhhhhhhHHHHcCcceEEEecccccccChhHhhcccccchhHHHHHHh
Confidence 5677778764 456899999999652 2333333446899999999999998766654322 1
Q ss_pred HHHHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCchHHHHHHHHHHHHHhhhCCCCCcccchh--hhhhhccccCCCCCCh
Q 012898 251 DMVKDASQGISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLLEQAIKETGEGESTTWSVS--QIRAYFGLSGGIMDGE 328 (454)
Q Consensus 251 ~~~~D~~~al~~l~~~~~~~g~d~~rI~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~--~i~~~~~~~g~~~~~~ 328 (454)
..+.+....+.|+.++ |. .+++|.|.||||++|..++...+...... ....|... .+..-+. +. .....
T Consensus 157 ~~i~E~~~Ll~Wl~~~----G~--~~~g~~G~SmGG~~A~laa~~~p~pv~~v-p~ls~~sAs~vFt~Gvl-s~-~i~W~ 227 (348)
T PF09752_consen 157 ATILESRALLHWLERE----GY--GPLGLTGISMGGHMAALAASNWPRPVALV-PCLSWSSASVVFTEGVL-SN-SINWD 227 (348)
T ss_pred HHHHHHHHHHHHHHhc----CC--CceEEEEechhHhhHHhhhhcCCCceeEE-EeecccCCCcchhhhhh-hc-CCCHH
Confidence 2467788888999886 22 48999999999999998887644321111 11111000 0000000 00 00000
Q ss_pred hhhhcC------------Ccccc-------cCCCc--------------cccccC-----CCCCEEEEEeCCCCCCChHH
Q 012898 329 ESLRQY------------SPEVL-------VQDPN--------------TRHAVS-----LLPPIILFHGTADYSIPADA 370 (454)
Q Consensus 329 ~~~~~~------------~p~~~-------~~~~~--------------~~~~~~-----~~pPvLiihGe~D~~Vp~~~ 370 (454)
...+++ ..... ..... ..+..+ ..-.++++.+++|..||.++
T Consensus 228 ~L~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ea~~~m~~~md~~T~l~nf~~P~dp~~ii~V~A~~DaYVPr~~ 307 (348)
T PF09752_consen 228 ALEKQFEDTVYEEEISDIPAQNKSLPLDSMEERRRDREALRFMRGVMDSFTHLTNFPVPVDPSAIIFVAAKNDAYVPRHG 307 (348)
T ss_pred HHHHHhcccchhhhhcccccCcccccchhhccccchHHHHHHHHHHHHhhccccccCCCCCCCcEEEEEecCceEechhh
Confidence 000000 00000 00000 000111 11158899999999999999
Q ss_pred HHHHHHHHHHcCCCEEEEEeCCCCccccccCCCCCCcHHHHHHHHHHHHH
Q 012898 371 SKNFANTLQRVGVRAESILYEGKTHTDLFLQDPMRGGKDDMFEDIVAIIH 420 (454)
Q Consensus 371 s~~l~~~l~~~g~~vel~~~~g~~H~~~~l~~p~~~~~~~~~~~i~~Fl~ 420 (454)
...+.+.+. .+|++.++| ||..-++... +.+.+.|.+-++
T Consensus 308 v~~Lq~~WP----GsEvR~l~g-GHVsA~L~~q-----~~fR~AI~Daf~ 347 (348)
T PF09752_consen 308 VLSLQEIWP----GSEVRYLPG-GHVSAYLLHQ-----EAFRQAIYDAFE 347 (348)
T ss_pred cchHHHhCC----CCeEEEecC-CcEEEeeech-----HHHHHHHHHHhh
Confidence 999988887 578888888 9997776532 555566665443
No 118
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=98.79 E-value=2e-08 Score=99.57 Aligned_cols=106 Identities=22% Similarity=0.216 Sum_probs=81.9
Q ss_pred CCCeeEEEEeeCCCCC-----CCcEEEEEcCCCccCCcccchhHHHHHHHhCCcEEEEEecCCCCCCCh-----------
Q 012898 186 QPRNRLDLYFPKSSDG-----PKPVVAFITGGAWIIGYKAWGSLLGQQLSERDIIVACIDYRNFPQGTI----------- 249 (454)
Q Consensus 186 ~~~~~l~vy~P~~~~~-----~~Pvvv~~HGgg~~~g~~~~~~~~~~~la~~G~~Vv~~dyr~~~~~~~----------- 249 (454)
+....+++|+|....+ +.|+||+-||.| ++...+..+++.+++.||+|..+++.+...+..
T Consensus 49 ~~~~~v~~~~p~~~~~~~~~~~~PlvvlshG~G---s~~~~f~~~A~~lAs~Gf~Va~~~hpgs~~~~~~~~~~~~~~~~ 125 (365)
T COG4188 49 DRERPVDLRLPQGGTGTVALYLLPLVVLSHGSG---SYVTGFAWLAEHLASYGFVVAAPDHPGSNAGGAPAAYAGPGSYA 125 (365)
T ss_pred CCccccceeccCCCccccccCcCCeEEecCCCC---CCccchhhhHHHHhhCceEEEeccCCCcccccCChhhcCCcccc
Confidence 3446899999987555 899999999954 556777889999999999999999987432211
Q ss_pred ----hHHHHHHHHHHHHHHHh---h-hhcCCCCCcEEEEEcCchHHHHHHHHH
Q 012898 250 ----KDMVKDASQGISFVCNN---I-SEYGGDPDRIYLMGQSAGAHIAACTLL 294 (454)
Q Consensus 250 ----~~~~~D~~~al~~l~~~---~-~~~g~d~~rI~l~G~S~GG~la~~~a~ 294 (454)
-+...|+...+++|.+. . -.=.+|+.||+++|||.||+.++.++.
T Consensus 126 p~~~~erp~dis~lLd~L~~~~~sP~l~~~ld~~~Vgv~GhS~GG~T~m~laG 178 (365)
T COG4188 126 PAEWWERPLDISALLDALLQLTASPALAGRLDPQRVGVLGHSFGGYTAMELAG 178 (365)
T ss_pred hhhhhcccccHHHHHHHHHHhhcCcccccccCccceEEEecccccHHHHHhcc
Confidence 13356888888888877 1 111378899999999999999987764
No 119
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=98.77 E-value=7e-08 Score=87.67 Aligned_cols=153 Identities=23% Similarity=0.239 Sum_probs=85.4
Q ss_pred EEEEcCCCccCCcccchhHHHHHHHhCCcEEEEEecCCCCCCChhHHHHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCch
Q 012898 206 VAFITGGAWIIGYKAWGSLLGQQLSERDIIVACIDYRNFPQGTIKDMVKDASQGISFVCNNISEYGGDPDRIYLMGQSAG 285 (454)
Q Consensus 206 vv~~HGgg~~~g~~~~~~~~~~~la~~G~~Vv~~dyr~~~~~~~~~~~~D~~~al~~l~~~~~~~g~d~~rI~l~G~S~G 285 (454)
|+++||-+ ..+...|+..+.+.+... +.|-.++. .. | |...=+..+.+.+.. .| +.++|+|||.|
T Consensus 1 v~IvhG~~-~s~~~HW~~wl~~~l~~~-~~V~~~~~----~~--P----~~~~W~~~l~~~i~~--~~-~~~ilVaHSLG 65 (171)
T PF06821_consen 1 VLIVHGYG-GSPPDHWQPWLERQLENS-VRVEQPDW----DN--P----DLDEWVQALDQAIDA--ID-EPTILVAHSLG 65 (171)
T ss_dssp EEEE--TT-SSTTTSTHHHHHHHHTTS-EEEEEC------TS--------HHHHHHHHHHCCHC---T-TTEEEEEETHH
T ss_pred CEEeCCCC-CCCccHHHHHHHHhCCCC-eEEecccc----CC--C----CHHHHHHHHHHHHhh--cC-CCeEEEEeCHH
Confidence 68899943 123344666677778776 66665554 11 1 222233334444432 33 46999999999
Q ss_pred HHHHHHHHHHHHHhhhCCCCCcccchhhhhhhccccCCCCCChhhhhcCCcccccCCCccccccCCCCCEEEEEeCCCCC
Q 012898 286 AHIAACTLLEQAIKETGEGESTTWSVSQIRAYFGLSGGIMDGEESLRQYSPEVLVQDPNTRHAVSLLPPIILFHGTADYS 365 (454)
Q Consensus 286 G~la~~~a~~~~~~~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~pPvLiihGe~D~~ 365 (454)
+..++.++... ....+.+.+.+++...... ....+........ .......|.+++.+++|+.
T Consensus 66 c~~~l~~l~~~-------------~~~~v~g~lLVAp~~~~~~---~~~~~~~~~f~~~--p~~~l~~~~~viaS~nDp~ 127 (171)
T PF06821_consen 66 CLTALRWLAEQ-------------SQKKVAGALLVAPFDPDDP---EPFPPELDGFTPL--PRDPLPFPSIVIASDNDPY 127 (171)
T ss_dssp HHHHHHHHHHT-------------CCSSEEEEEEES--SCGCH---HCCTCGGCCCTTS--HCCHHHCCEEEEEETTBSS
T ss_pred HHHHHHHHhhc-------------ccccccEEEEEcCCCcccc---cchhhhccccccC--cccccCCCeEEEEcCCCCc
Confidence 99999998521 1345666677666311100 0111100000000 0001112679999999999
Q ss_pred CChHHHHHHHHHHHHcCCCEEEEEeCCCCcc
Q 012898 366 IPADASKNFANTLQRVGVRAESILYEGKTHT 396 (454)
Q Consensus 366 Vp~~~s~~l~~~l~~~g~~vel~~~~g~~H~ 396 (454)
||++.++++++++. .+++.++++||.
T Consensus 128 vp~~~a~~~A~~l~-----a~~~~~~~~GHf 153 (171)
T PF06821_consen 128 VPFERAQRLAQRLG-----AELIILGGGGHF 153 (171)
T ss_dssp S-HHHHHHHHHHHT------EEEEETS-TTS
T ss_pred cCHHHHHHHHHHcC-----CCeEECCCCCCc
Confidence 99999999999995 799999999997
No 120
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=98.76 E-value=4.5e-08 Score=95.44 Aligned_cols=95 Identities=17% Similarity=0.183 Sum_probs=63.1
Q ss_pred CCcEEEEEcCCCccCCcccchhHHHHHHHhCCcEEEEEe----cCCCCCCChhHHHHHHHHHHHHHHHhhhhcCCCCCcE
Q 012898 202 PKPVVAFITGGAWIIGYKAWGSLLGQQLSERDIIVACID----YRNFPQGTIKDMVKDASQGISFVCNNISEYGGDPDRI 277 (454)
Q Consensus 202 ~~Pvvv~~HGgg~~~g~~~~~~~~~~~la~~G~~Vv~~d----yr~~~~~~~~~~~~D~~~al~~l~~~~~~~g~d~~rI 277 (454)
...+||||-|-+-...+..+...+++.|...||.|+-+. |.++|.+.+..-.+|+.++++|++..-.. ....++|
T Consensus 32 ~~~~llfIGGLtDGl~tvpY~~~La~aL~~~~wsl~q~~LsSSy~G~G~~SL~~D~~eI~~~v~ylr~~~~g-~~~~~kI 110 (303)
T PF08538_consen 32 APNALLFIGGLTDGLLTVPYLPDLAEALEETGWSLFQVQLSSSYSGWGTSSLDRDVEEIAQLVEYLRSEKGG-HFGREKI 110 (303)
T ss_dssp SSSEEEEE--TT--TT-STCHHHHHHHHT-TT-EEEEE--GGGBTTS-S--HHHHHHHHHHHHHHHHHHS-------S-E
T ss_pred CCcEEEEECCCCCCCCCCchHHHHHHHhccCCeEEEEEEecCccCCcCcchhhhHHHHHHHHHHHHHHhhcc-ccCCccE
Confidence 344899998854333455566778888877899999986 55778788888899999999999987311 1256799
Q ss_pred EEEEcCchHHHHHHHHHHHH
Q 012898 278 YLMGQSAGAHIAACTLLEQA 297 (454)
Q Consensus 278 ~l~G~S~GG~la~~~a~~~~ 297 (454)
+|+|||-|..-++.++....
T Consensus 111 VLmGHSTGcQdvl~Yl~~~~ 130 (303)
T PF08538_consen 111 VLMGHSTGCQDVLHYLSSPN 130 (303)
T ss_dssp EEEEECCHHHHHHHHHHH-T
T ss_pred EEEecCCCcHHHHHHHhccC
Confidence 99999999999999998754
No 121
>KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=98.74 E-value=2.6e-07 Score=96.40 Aligned_cols=231 Identities=14% Similarity=0.103 Sum_probs=139.0
Q ss_pred ceeccCCCC--eeEEEEeeCC--CCCCCcEEEEEcCCCccCCcccchhHHHHHHHhCCcEEEEEecCCCCCCCh------
Q 012898 180 GIVYGDQPR--NRLDLYFPKS--SDGPKPVVAFITGGAWIIGYKAWGSLLGQQLSERDIIVACIDYRNFPQGTI------ 249 (454)
Q Consensus 180 ~v~y~~~~~--~~l~vy~P~~--~~~~~Pvvv~~HGgg~~~g~~~~~~~~~~~la~~G~~Vv~~dyr~~~~~~~------ 249 (454)
.+.|.+.++ +++.|..-+. ..+..|.+|+.|||....-.+.+ ..-...|.++|++.+..|.||+|+.+.
T Consensus 443 r~~~~SkDGt~VPM~Iv~kk~~k~dg~~P~LLygYGay~isl~p~f-~~srl~lld~G~Vla~a~VRGGGe~G~~WHk~G 521 (712)
T KOG2237|consen 443 RIEVSSKDGTKVPMFIVYKKDIKLDGSKPLLLYGYGAYGISLDPSF-RASRLSLLDRGWVLAYANVRGGGEYGEQWHKDG 521 (712)
T ss_pred EEEEecCCCCccceEEEEechhhhcCCCceEEEEecccceeecccc-ccceeEEEecceEEEEEeeccCcccccchhhcc
Confidence 344444444 3555555332 34578999999997543333333 222234456899999999999887642
Q ss_pred -----hHHHHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCchHHHHHHHHHHHHHhhhCCCCCcccc-hhhhhh-------
Q 012898 250 -----KDMVKDASQGISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLLEQAIKETGEGESTTWS-VSQIRA------- 316 (454)
Q Consensus 250 -----~~~~~D~~~al~~l~~~~~~~g~d~~rI~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~-~~~i~~------- 316 (454)
...++|..++.++|.++.- ..+++.++.|.|+||.++..+..++++......+....- ......
T Consensus 522 ~lakKqN~f~Dfia~AeyLve~gy---t~~~kL~i~G~SaGGlLvga~iN~rPdLF~avia~VpfmDvL~t~~~tilplt 598 (712)
T KOG2237|consen 522 RLAKKQNSFDDFIACAEYLVENGY---TQPSKLAIEGGSAGGLLVGACINQRPDLFGAVIAKVPFMDVLNTHKDTILPLT 598 (712)
T ss_pred chhhhcccHHHHHHHHHHHHHcCC---CCccceeEecccCccchhHHHhccCchHhhhhhhcCcceehhhhhccCccccc
Confidence 1348899999999988632 578899999999999999988877766544332221110 000000
Q ss_pred --hccccCCCCCChhhhhcCCcccccCCCccccccCCCCCEEEEEeCCCCCCChHHHHHHHHHHHHc-------CCCEEE
Q 012898 317 --YFGLSGGIMDGEESLRQYSPEVLVQDPNTRHAVSLLPPIILFHGTADYSIPADASKNFANTLQRV-------GVRAES 387 (454)
Q Consensus 317 --~~~~~g~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~pPvLiihGe~D~~Vp~~~s~~l~~~l~~~-------g~~vel 387 (454)
-+.-.| .......+..+++-.-..++. .. ..-|-+|+..+++|..|++.++.++.++|++. ..++-+
T Consensus 599 ~sd~ee~g-~p~~~~~~~~i~~y~pv~~i~--~q-~~YPS~lvtta~hD~RV~~~~~~K~vAklre~~~~~~~q~~pvll 674 (712)
T KOG2237|consen 599 TSDYEEWG-NPEDFEDLIKISPYSPVDNIK--KQ-VQYPSMLVTTADHDDRVGPLESLKWVAKLREATCDSLKQTNPVLL 674 (712)
T ss_pred hhhhcccC-ChhhhhhhheecccCccCCCc--hh-ccCcceEEeeccCCCcccccchHHHHHHHHHHhhcchhcCCCEEE
Confidence 001111 111222233333322222221 00 13567999999999999999999999888764 245888
Q ss_pred EEeCCCCccccccCCCCCCcHHHHHHHHHHHHHhc
Q 012898 388 ILYEGKTHTDLFLQDPMRGGKDDMFEDIVAIIHAD 422 (454)
Q Consensus 388 ~~~~g~~H~~~~l~~p~~~~~~~~~~~i~~Fl~~~ 422 (454)
.+..++||+ ..+|.. ..-+-.....+||.+.
T Consensus 675 ~i~~~agH~---~~~~~~-k~~~E~a~~yaFl~K~ 705 (712)
T KOG2237|consen 675 RIETKAGHG---AEKPRF-KQIEEAAFRYAFLAKM 705 (712)
T ss_pred EEecCCccc---cCCchH-HHHHHHHHHHHHHHHH
Confidence 999999997 223322 1223334556677654
No 122
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=98.73 E-value=2.2e-08 Score=93.37 Aligned_cols=158 Identities=18% Similarity=0.235 Sum_probs=93.9
Q ss_pred cEEEEEecCCCCCCCh---h----HHHHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCchHHHHHHHHHHHHHhhhCCCCC
Q 012898 234 IIVACIDYRNFPQGTI---K----DMVKDASQGISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLLEQAIKETGEGES 306 (454)
Q Consensus 234 ~~Vv~~dyr~~~~~~~---~----~~~~D~~~al~~l~~~~~~~g~d~~rI~l~G~S~GG~la~~~a~~~~~~~~~~~~~ 306 (454)
|.|+++|.||++.+.. . -...|..+.++.+.+.. |.+ ++.++|||+||.+++.++..++.........
T Consensus 1 f~vi~~d~rG~g~S~~~~~~~~~~~~~~~~~~~~~~~~~~l---~~~--~~~~vG~S~Gg~~~~~~a~~~p~~v~~lvl~ 75 (230)
T PF00561_consen 1 FDVILFDLRGFGYSSPHWDPDFPDYTTDDLAADLEALREAL---GIK--KINLVGHSMGGMLALEYAAQYPERVKKLVLI 75 (230)
T ss_dssp EEEEEEECTTSTTSSSCCGSGSCTHCHHHHHHHHHHHHHHH---TTS--SEEEEEETHHHHHHHHHHHHSGGGEEEEEEE
T ss_pred CEEEEEeCCCCCCCCCCccCCcccccHHHHHHHHHHHHHHh---CCC--CeEEEEECCChHHHHHHHHHCchhhcCcEEE
Confidence 6799999999988772 1 24677888888887754 444 5999999999999999999987743332111
Q ss_pred ccc----------------chhhhhhh-cc-ccCC--------C-----C-----CC------hhhhhcCCcc------c
Q 012898 307 TTW----------------SVSQIRAY-FG-LSGG--------I-----M-----DG------EESLRQYSPE------V 338 (454)
Q Consensus 307 ~~~----------------~~~~i~~~-~~-~~g~--------~-----~-----~~------~~~~~~~~p~------~ 338 (454)
... ........ .. .... . + .. ...+...... .
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (230)
T PF00561_consen 76 SPPPDLPDGLWNRIWPRGNLQGQLLDNFFNFLSDPIKPLLGRWPKQFFAYDREFVEDFLKQFQSQQYARFAETDAFDNMF 155 (230)
T ss_dssp SESSHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTCHHHHHHHHH
T ss_pred eeeccchhhhhHHHHhhhhhhhhHHHhhhccccccchhhhhhhhhheeeccCccccchhhccchhhhhHHHHHHHHhhhc
Confidence 110 00000000 00 0000 0 0 00 0000000000 0
Q ss_pred ------ccCCCccccccCCCCCEEEEEeCCCCCCChHHHHHHHHHHHHcCCCEEEEEeCCCCccccccC
Q 012898 339 ------LVQDPNTRHAVSLLPPIILFHGTADYSIPADASKNFANTLQRVGVRAESILYEGKTHTDLFLQ 401 (454)
Q Consensus 339 ------~~~~~~~~~~~~~~pPvLiihGe~D~~Vp~~~s~~l~~~l~~~g~~vel~~~~g~~H~~~~l~ 401 (454)
...............|+++++|++|.++|.+....+.+.+. +.+++++++.||. .++.
T Consensus 156 ~~~~~~~~~~~~~~~l~~i~~p~l~i~~~~D~~~p~~~~~~~~~~~~----~~~~~~~~~~GH~-~~~~ 219 (230)
T PF00561_consen 156 WNALGYFSVWDPSPALSNIKVPTLIIWGEDDPLVPPESSEQLAKLIP----NSQLVLIEGSGHF-AFLE 219 (230)
T ss_dssp HHHHHHHHHHHHHHHHTTTTSEEEEEEETTCSSSHHHHHHHHHHHST----TEEEEEETTCCST-HHHH
T ss_pred cccccccccccccccccccCCCeEEEEeCCCCCCCHHHHHHHHHhcC----CCEEEECCCCChH-HHhc
Confidence 00000011223456799999999999999999999777665 5899999999998 4443
No 123
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=98.66 E-value=1.5e-07 Score=92.24 Aligned_cols=92 Identities=21% Similarity=0.278 Sum_probs=61.7
Q ss_pred CCCCcEEEEEcCCCccCCc-ccchhHHHHHHHh-CCcEEEEEecCCCCCCChhHHH-------HHHHHHHHHHHHhhhhc
Q 012898 200 DGPKPVVAFITGGAWIIGY-KAWGSLLGQQLSE-RDIIVACIDYRNFPQGTIKDMV-------KDASQGISFVCNNISEY 270 (454)
Q Consensus 200 ~~~~Pvvv~~HGgg~~~g~-~~~~~~~~~~la~-~G~~Vv~~dyr~~~~~~~~~~~-------~D~~~al~~l~~~~~~~ 270 (454)
...+|++|++||- .... ..+...+.+.+.+ .++.|+++|++++.....+... +++...++++.+ ..
T Consensus 33 ~~~~p~vilIHG~--~~~~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~y~~a~~~~~~v~~~la~~l~~L~~---~~ 107 (275)
T cd00707 33 NPSRPTRFIIHGW--TSSGEESWISDLRKAYLSRGDYNVIVVDWGRGANPNYPQAVNNTRVVGAELAKFLDFLVD---NT 107 (275)
T ss_pred CCCCCcEEEEcCC--CCCCCCcHHHHHHHHHHhcCCCEEEEEECccccccChHHHHHhHHHHHHHHHHHHHHHHH---hc
Confidence 4557899999993 3222 3344455554544 5899999999987544443322 233444444433 34
Q ss_pred CCCCCcEEEEEcCchHHHHHHHHHHH
Q 012898 271 GGDPDRIYLMGQSAGAHIAACTLLEQ 296 (454)
Q Consensus 271 g~d~~rI~l~G~S~GG~la~~~a~~~ 296 (454)
+.+.++|.|+|||+||++|..++.+.
T Consensus 108 g~~~~~i~lIGhSlGa~vAg~~a~~~ 133 (275)
T cd00707 108 GLSLENVHLIGHSLGAHVAGFAGKRL 133 (275)
T ss_pred CCChHHEEEEEecHHHHHHHHHHHHh
Confidence 66778999999999999999998764
No 124
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=98.62 E-value=1.6e-06 Score=91.19 Aligned_cols=208 Identities=18% Similarity=0.172 Sum_probs=132.1
Q ss_pred eeceeccCCCC--eeEEEEeeCC--CCCCCcEEEEEcCCCccCCcccchhHHHHHHHhCCcEEEEEecCCCCCCCh---h
Q 012898 178 RRGIVYGDQPR--NRLDLYFPKS--SDGPKPVVAFITGGAWIIGYKAWGSLLGQQLSERDIIVACIDYRNFPQGTI---K 250 (454)
Q Consensus 178 ~~~v~y~~~~~--~~l~vy~P~~--~~~~~Pvvv~~HGgg~~~g~~~~~~~~~~~la~~G~~Vv~~dyr~~~~~~~---~ 250 (454)
++.+.....++ +++.++.-++ .+++.|++++..|.... .....+....-.|..+|++-...-.||+++-+. .
T Consensus 419 s~riwa~a~dgv~VPVSLvyrkd~~~~g~~p~lLygYGaYG~-s~~p~Fs~~~lSLlDRGfiyAIAHVRGGgelG~~WYe 497 (682)
T COG1770 419 SRRIWATADDGVQVPVSLVYRKDTKLDGSAPLLLYGYGAYGI-SMDPSFSIARLSLLDRGFVYAIAHVRGGGELGRAWYE 497 (682)
T ss_pred EEEEEEEcCCCcEeeEEEEEecccCCCCCCcEEEEEeccccc-cCCcCcccceeeeecCceEEEEEEeecccccChHHHH
Confidence 34444333343 3555555543 46778999999996422 222233334456788999999999999876542 1
Q ss_pred --------HHHHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCchHHHHHHHHHHHHHhhhCCCCCcccc---hhhhhhhcc
Q 012898 251 --------DMVKDASQGISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLLEQAIKETGEGESTTWS---VSQIRAYFG 319 (454)
Q Consensus 251 --------~~~~D~~~al~~l~~~~~~~g~d~~rI~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~---~~~i~~~~~ 319 (454)
..+.|..++.++|.+..- +++++|+++|-|+||.++...+...++...+..+...+. ...+..-..
T Consensus 498 ~GK~l~K~NTf~DFIa~a~~Lv~~g~---~~~~~i~a~GGSAGGmLmGav~N~~P~lf~~iiA~VPFVDvltTMlD~slP 574 (682)
T COG1770 498 DGKLLNKKNTFTDFIAAARHLVKEGY---TSPDRIVAIGGSAGGMLMGAVANMAPDLFAGIIAQVPFVDVLTTMLDPSLP 574 (682)
T ss_pred hhhhhhccccHHHHHHHHHHHHHcCc---CCccceEEeccCchhHHHHHHHhhChhhhhheeecCCccchhhhhcCCCCC
Confidence 247899999999988632 678899999999999999998888776655543322211 011111111
Q ss_pred cc-------CCCCC--ChhhhhcCCcccccCCCccccccCCCCCEEEEEeCCCCCCChHHHHHHHHHHHHcCCC---EEE
Q 012898 320 LS-------GGIMD--GEESLRQYSPEVLVQDPNTRHAVSLLPPIILFHGTADYSIPADASKNFANTLQRVGVR---AES 387 (454)
Q Consensus 320 ~~-------g~~~~--~~~~~~~~~p~~~~~~~~~~~~~~~~pPvLiihGe~D~~Vp~~~s~~l~~~l~~~g~~---vel 387 (454)
+. |.+.+ ..+.++.++|-.-+. ....|++|+..|..|..|.+.+..++..+|++.+.. +-+
T Consensus 575 LT~~E~~EWGNP~d~e~y~yikSYSPYdNV~-------a~~YP~ilv~~Gl~D~rV~YwEpAKWvAkLR~~~td~~plLl 647 (682)
T COG1770 575 LTVTEWDEWGNPLDPEYYDYIKSYSPYDNVE-------AQPYPAILVTTGLNDPRVQYWEPAKWVAKLRELKTDGNPLLL 647 (682)
T ss_pred CCccchhhhCCcCCHHHHHHHhhcCchhccc-------cCCCCceEEEccccCCccccchHHHHHHHHhhcccCCCcEEE
Confidence 11 11110 112233344432211 134579999999999999999999999999987543 445
Q ss_pred EEeCCCCcc
Q 012898 388 ILYEGKTHT 396 (454)
Q Consensus 388 ~~~~g~~H~ 396 (454)
.+=-++||+
T Consensus 648 kt~M~aGHg 656 (682)
T COG1770 648 KTNMDAGHG 656 (682)
T ss_pred EecccccCC
Confidence 554678997
No 125
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=98.57 E-value=6.6e-07 Score=84.17 Aligned_cols=167 Identities=19% Similarity=0.173 Sum_probs=86.7
Q ss_pred CCcEEEEEcCCCccCCcccc----hhHHHHHHHhCCcEEEEEecCCCC--CC---------------------Ch-----
Q 012898 202 PKPVVAFITGGAWIIGYKAW----GSLLGQQLSERDIIVACIDYRNFP--QG---------------------TI----- 249 (454)
Q Consensus 202 ~~Pvvv~~HGgg~~~g~~~~----~~~~~~~la~~G~~Vv~~dyr~~~--~~---------------------~~----- 249 (454)
+++-|+++||.+ .+... ...+.+.|.+.++..+.+|-+.-- .. ++
T Consensus 3 ~k~riLcLHG~~---~na~if~~q~~~l~~~l~~~~~ef~f~dgP~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~ 79 (212)
T PF03959_consen 3 RKPRILCLHGYG---QNAEIFRQQTSALRKALKKLDFEFVFVDGPHEVPPGPGIEPFSSEAESAFGDPGPFYSWWDPDDD 79 (212)
T ss_dssp ---EEEEE--TT-----HHHHHHHTHHHHHHHHHTT-EEEEE--SEE---GGG-SS---HHHHHHHHTT--EESS---S-
T ss_pred CCceEEEeCCCC---cCHHHHHHHHHHHHHHHhhCcEEEEEecCCcccCCcccccccccccccccCCCCcceeeeecCCC
Confidence 467899999964 23322 234556666546777777643210 00 01
Q ss_pred hHHHHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCchHHHHHHHHHHHHHhhhCCCCCcccchhhhhhhccccCCCCCChh
Q 012898 250 KDMVKDASQGISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLLEQAIKETGEGESTTWSVSQIRAYFGLSGGIMDGEE 329 (454)
Q Consensus 250 ~~~~~D~~~al~~l~~~~~~~g~d~~rI~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~ 329 (454)
.....++..++++|.+.+.+.|- =.+|+|+|+||.+|+.++.......... ....++-.+.++|. .....
T Consensus 80 ~~~~~~~~~sl~~l~~~i~~~GP---fdGvlGFSQGA~lAa~ll~~~~~~~~~~------~~~~~kf~V~~sg~-~p~~~ 149 (212)
T PF03959_consen 80 DHEYEGLDESLDYLRDYIEENGP---FDGVLGFSQGAALAALLLALQQRGRPDG------AHPPFKFAVFISGF-PPPDP 149 (212)
T ss_dssp SGGG---HHHHHHHHHHHHHH------SEEEEETHHHHHHHHHHHHHHHHST--------T----SEEEEES-----EEE
T ss_pred cccccCHHHHHHHHHHHHHhcCC---eEEEEeecHHHHHHHHHHHHHHhhcccc------cCCCceEEEEEccc-CCCch
Confidence 01255678888999888876541 3689999999999998887644322110 12234444455552 11111
Q ss_pred hhhcCCcccccCCCccccccCCCCCEEEEEeCCCCCCChHHHHHHHHHHHHcCCCEEEEEeCCCCcc
Q 012898 330 SLRQYSPEVLVQDPNTRHAVSLLPPIILFHGTADYSIPADASKNFANTLQRVGVRAESILYEGKTHT 396 (454)
Q Consensus 330 ~~~~~~p~~~~~~~~~~~~~~~~pPvLiihGe~D~~Vp~~~s~~l~~~l~~~g~~vel~~~~g~~H~ 396 (454)
..... ........|+|.++|++|.+++.+.++.+++.+... .+++.++| ||.
T Consensus 150 ~~~~~-----------~~~~~i~iPtlHv~G~~D~~~~~~~s~~L~~~~~~~---~~v~~h~g-GH~ 201 (212)
T PF03959_consen 150 DYQEL-----------YDEPKISIPTLHVIGENDPVVPPERSEALAEMFDPD---ARVIEHDG-GHH 201 (212)
T ss_dssp -GTTT-----------T--TT---EEEEEEETT-SSS-HHHHHHHHHHHHHH---EEEEEESS-SSS
T ss_pred hhhhh-----------hccccCCCCeEEEEeCCCCCcchHHHHHHHHhccCC---cEEEEECC-CCc
Confidence 11000 011223459999999999999999999999999853 67777776 786
No 126
>KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism]
Probab=98.54 E-value=1.7e-06 Score=83.35 Aligned_cols=191 Identities=13% Similarity=0.193 Sum_probs=114.8
Q ss_pred CCCCCCcEEEEEcCCCccCCcccchhHHHHHHHhCCcEEEEEecCCCCCC------------C-----------------
Q 012898 198 SSDGPKPVVAFITGGAWIIGYKAWGSLLGQQLSERDIIVACIDYRNFPQG------------T----------------- 248 (454)
Q Consensus 198 ~~~~~~Pvvv~~HGgg~~~g~~~~~~~~~~~la~~G~~Vv~~dyr~~~~~------------~----------------- 248 (454)
+..++.|+|||-|| ..|+...|..++-.||++||+|.++++|-.... .
T Consensus 113 tk~~k~PvvvFSHG---LggsRt~YSa~c~~LAShG~VVaavEHRD~SA~~Ty~~~~~~~n~~lveq~~~ir~v~~~eke 189 (399)
T KOG3847|consen 113 TKNDKYPVVVFSHG---LGGSRTLYSAYCTSLASHGFVVAAVEHRDRSACWTYVLKEKHENEPLVEQWIKIRLVEANEKE 189 (399)
T ss_pred CCCCCccEEEEecc---cccchhhHHHHhhhHhhCceEEEEeecccCcceeEEEecccccCCcccccceEeeeeccCcee
Confidence 34678999999999 447888899999999999999999999852110 0
Q ss_pred -------hhHHHHHHHHHHHHHHHhh----------------h--hcCCCCCcEEEEEcCchHHHHHHHHHHHHHhhhCC
Q 012898 249 -------IKDMVKDASQGISFVCNNI----------------S--EYGGDPDRIYLMGQSAGAHIAACTLLEQAIKETGE 303 (454)
Q Consensus 249 -------~~~~~~D~~~al~~l~~~~----------------~--~~g~d~~rI~l~G~S~GG~la~~~a~~~~~~~~~~ 303 (454)
......++..|++.+++.- + +-.+|-.++.|+|||.||+.++.....
T Consensus 190 f~irNeqv~~R~~Ec~~aL~il~~i~~g~~~~~~L~g~~~~~~~~K~nl~~s~~aViGHSFGgAT~i~~ss~-------- 261 (399)
T KOG3847|consen 190 FHIRNEQVGQRAQECQKALKILEQINDGGTPDNVLPGNNSDLEQLKGNLDTSQAAVIGHSFGGATSIASSSS-------- 261 (399)
T ss_pred EEeeCHHHHHHHHHHHHHHHHHHHhhcCCCchhcccCccccHHHHhcchhhhhhhheeccccchhhhhhhcc--------
Confidence 0012556777777776431 0 113677789999999999998766543
Q ss_pred CCCcccchhhhhhhccccCCCCCChhhhhcCCcccccCCCccccccCCCCCEEEEEeCCCCCCChHHHHHHHHHHHHcCC
Q 012898 304 GESTTWSVSQIRAYFGLSGGIMDGEESLRQYSPEVLVQDPNTRHAVSLLPPIILFHGTADYSIPADASKNFANTLQRVGV 383 (454)
Q Consensus 304 ~~~~~~~~~~i~~~~~~~g~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~pPvLiihGe~D~~Vp~~~s~~l~~~l~~~g~ 383 (454)
...++..+.+.+.... .....+. ....|+|++.- .|-. .......-+.+...+.
T Consensus 262 -------~t~FrcaI~lD~WM~P-------l~~~~~~---------~arqP~~finv-~~fQ--~~en~~vmKki~~~n~ 315 (399)
T KOG3847|consen 262 -------HTDFRCAIALDAWMFP-------LDQLQYS---------QARQPTLFINV-EDFQ--WNENLLVMKKIESQNE 315 (399)
T ss_pred -------ccceeeeeeeeeeecc-------cchhhhh---------hccCCeEEEEc-cccc--chhHHHHHHhhhCCCc
Confidence 2345544544441110 1111111 11238888873 2322 2233333344434444
Q ss_pred CEEEEEeCCCCcccccc------------------CCCCCCcHHHHHHHHHHHHHhcChhh
Q 012898 384 RAESILYEGKTHTDLFL------------------QDPMRGGKDDMFEDIVAIIHADDQEA 426 (454)
Q Consensus 384 ~vel~~~~g~~H~~~~l------------------~~p~~~~~~~~~~~i~~Fl~~~~~~~ 426 (454)
.-.++++.|.-|-.+-. .+| .+..+-.++..++||.++....
T Consensus 316 g~~~it~~GsVHqnfsDfpfv~p~~i~k~f~~kg~~dp-y~~~~~~~r~slaFLq~h~d~~ 375 (399)
T KOG3847|consen 316 GNHVITLDGSVHQNFSDFPFVTPNWIGKVFKVKGETDP-YEAMQIAIRASLAFLQKHLDLV 375 (399)
T ss_pred cceEEEEccceecccccCccccHHHHHHHhccCCCCCh-HHHHHHHHHHHHHHHHhhhhhh
Confidence 45778889988864321 111 1123456677888999876543
No 127
>PRK04940 hypothetical protein; Provisional
Probab=98.54 E-value=9.2e-07 Score=80.18 Aligned_cols=120 Identities=12% Similarity=0.061 Sum_probs=72.3
Q ss_pred CcEEEEEcCchHHHHHHHHHHHHHhhhCCCCCcccchhhhhhhccccCCCCCChhhhhcCCcccccCCCccccccCCCCC
Q 012898 275 DRIYLMGQSAGAHIAACTLLEQAIKETGEGESTTWSVSQIRAYFGLSGGIMDGEESLRQYSPEVLVQDPNTRHAVSLLPP 354 (454)
Q Consensus 275 ~rI~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~pP 354 (454)
+++.|+|.|+||..|.+++.+...+...... ...+...+..+++..- . ...+.+.....- . .+....
T Consensus 60 ~~~~liGSSLGGyyA~~La~~~g~~aVLiNP-Av~P~~~L~~~ig~~~------~-y~~~~~~h~~eL---~--~~~p~r 126 (180)
T PRK04940 60 ERPLICGVGLGGYWAERIGFLCGIRQVIFNP-NLFPEENMEGKIDRPE------E-YADIATKCVTNF---R--EKNRDR 126 (180)
T ss_pred CCcEEEEeChHHHHHHHHHHHHCCCEEEECC-CCChHHHHHHHhCCCc------c-hhhhhHHHHHHh---h--hcCccc
Confidence 4699999999999999999886544322211 1111222333332111 0 111111111000 0 111125
Q ss_pred EEEEEeCCCCCCChHHHHHHHHHHHHcCCCEEEEEeCCCCccccccCCCCCCcHHHHHHHHHHHHHh
Q 012898 355 IILFHGTADYSIPADASKNFANTLQRVGVRAESILYEGKTHTDLFLQDPMRGGKDDMFEDIVAIIHA 421 (454)
Q Consensus 355 vLiihGe~D~~Vp~~~s~~l~~~l~~~g~~vel~~~~g~~H~~~~l~~p~~~~~~~~~~~i~~Fl~~ 421 (454)
.+++..+.|++..+.++.+.+... .+..+.+|++|.+. ..++.+..|++|+..
T Consensus 127 ~~vllq~gDEvLDyr~a~~~y~~~------y~~~v~~GGdH~f~--------~fe~~l~~I~~F~~~ 179 (180)
T PRK04940 127 CLVILSRNDEVLDSQRTAEELHPY------YEIVWDEEQTHKFK--------NISPHLQRIKAFKTL 179 (180)
T ss_pred EEEEEeCCCcccCHHHHHHHhccC------ceEEEECCCCCCCC--------CHHHHHHHHHHHHhc
Confidence 799999999999988877776532 26789999999833 357899999999853
No 128
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=98.52 E-value=5.8e-06 Score=87.18 Aligned_cols=100 Identities=16% Similarity=0.121 Sum_probs=67.6
Q ss_pred CCeeEEEEeeCCCCCCCcEEEEEcCCC--ccCCcccchhHHHHHHHhCCcEEEEEecCCCCCC----ChhHHHHHHHHHH
Q 012898 187 PRNRLDLYFPKSSDGPKPVVAFITGGA--WIIGYKAWGSLLGQQLSERDIIVACIDYRNFPQG----TIKDMVKDASQGI 260 (454)
Q Consensus 187 ~~~~l~vy~P~~~~~~~Pvvv~~HGgg--~~~g~~~~~~~~~~~la~~G~~Vv~~dyr~~~~~----~~~~~~~D~~~al 260 (454)
+...+.-|.|......+.-||+++.-- +..-+-.-...+.++|.++|+.|+++|++..... .+.+.++.+..|+
T Consensus 199 ~l~eLiqY~P~te~v~~~PLLIVPp~INK~YIlDL~P~~SlVr~lv~qG~~VflIsW~nP~~~~r~~~ldDYv~~i~~Al 278 (560)
T TIGR01839 199 EVLELIQYKPITEQQHARPLLVVPPQINKFYIFDLSPEKSFVQYCLKNQLQVFIISWRNPDKAHREWGLSTYVDALKEAV 278 (560)
T ss_pred CceEEEEeCCCCCCcCCCcEEEechhhhhhheeecCCcchHHHHHHHcCCeEEEEeCCCCChhhcCCCHHHHHHHHHHHH
Confidence 345677787865433344466666610 1111111224589999999999999999975432 3455566777888
Q ss_pred HHHHHhhhhcCCCCCcEEEEEcCchHHHHHH
Q 012898 261 SFVCNNISEYGGDPDRIYLMGQSAGAHIAAC 291 (454)
Q Consensus 261 ~~l~~~~~~~g~d~~rI~l~G~S~GG~la~~ 291 (454)
+.++++. ..++|.++|+|+||.++++
T Consensus 279 d~V~~~t-----G~~~vnl~GyC~GGtl~a~ 304 (560)
T TIGR01839 279 DAVRAIT-----GSRDLNLLGACAGGLTCAA 304 (560)
T ss_pred HHHHHhc-----CCCCeeEEEECcchHHHHH
Confidence 8887762 3468999999999999987
No 129
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.51 E-value=3.6e-06 Score=78.09 Aligned_cols=88 Identities=15% Similarity=0.133 Sum_probs=55.0
Q ss_pred CcEEEEEcCCCccCCcccchhHHHHHHHhC--CcEEEEEecCCCCCCC--hhHHHHHHHHHHHHHHHhhhhcCCCCCcEE
Q 012898 203 KPVVAFITGGAWIIGYKAWGSLLGQQLSER--DIIVACIDYRNFPQGT--IKDMVKDASQGISFVCNNISEYGGDPDRIY 278 (454)
Q Consensus 203 ~Pvvv~~HGgg~~~g~~~~~~~~~~~la~~--G~~Vv~~dyr~~~~~~--~~~~~~D~~~al~~l~~~~~~~g~d~~rI~ 278 (454)
.|.|+++||.+. +...+......+... .|.++.+|.|+++.+. .... ... .+.+...+..++.+ ++.
T Consensus 21 ~~~i~~~hg~~~---~~~~~~~~~~~~~~~~~~~~~~~~d~~g~g~s~~~~~~~-~~~---~~~~~~~~~~~~~~--~~~ 91 (282)
T COG0596 21 GPPLVLLHGFPG---SSSVWRPVFKVLPALAARYRVIAPDLRGHGRSDPAGYSL-SAY---ADDLAALLDALGLE--KVV 91 (282)
T ss_pred CCeEEEeCCCCC---chhhhHHHHHHhhccccceEEEEecccCCCCCCcccccH-HHH---HHHHHHHHHHhCCC--ceE
Confidence 458999999653 222222222223332 1999999999988875 1111 111 33333334444554 499
Q ss_pred EEEcCchHHHHHHHHHHHHHh
Q 012898 279 LMGQSAGAHIAACTLLEQAIK 299 (454)
Q Consensus 279 l~G~S~GG~la~~~a~~~~~~ 299 (454)
++|||+||.++..++.+.+..
T Consensus 92 l~G~S~Gg~~~~~~~~~~p~~ 112 (282)
T COG0596 92 LVGHSMGGAVALALALRHPDR 112 (282)
T ss_pred EEEecccHHHHHHHHHhcchh
Confidence 999999999999999887664
No 130
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=98.50 E-value=4.5e-06 Score=73.24 Aligned_cols=158 Identities=16% Similarity=0.177 Sum_probs=92.1
Q ss_pred cEEEEEcCCCccCCcccchhHHHHHHHhCCcEEEEEecCCC-----CCC-Chh--HH-HHHHHHHHHHHHHhhhhcCCCC
Q 012898 204 PVVAFITGGAWIIGYKAWGSLLGQQLSERDIIVACIDYRNF-----PQG-TIK--DM-VKDASQGISFVCNNISEYGGDP 274 (454)
Q Consensus 204 Pvvv~~HGgg~~~g~~~~~~~~~~~la~~G~~Vv~~dyr~~-----~~~-~~~--~~-~~D~~~al~~l~~~~~~~g~d~ 274 (454)
-+||+-||.|-... ...+...+..|+.+|+.|+-+++... +.. +.+ .. ......++.-+++ +++.
T Consensus 15 ~tilLaHGAGasmd-St~m~~~a~~la~~G~~vaRfefpYma~Rrtg~rkPp~~~~t~~~~~~~~~aql~~-----~l~~ 88 (213)
T COG3571 15 VTILLAHGAGASMD-STSMTAVAAALARRGWLVARFEFPYMAARRTGRRKPPPGSGTLNPEYIVAIAQLRA-----GLAE 88 (213)
T ss_pred EEEEEecCCCCCCC-CHHHHHHHHHHHhCceeEEEeecchhhhccccCCCCcCccccCCHHHHHHHHHHHh-----cccC
Confidence 47889999663322 23456688999999999999987642 111 111 11 1112223333333 3555
Q ss_pred CcEEEEEcCchHHHHHHHHHHHHHhhhCCCCCcccchhhhhhhccccCCCCCChhhhhcCCcccccCCCccccccCCCCC
Q 012898 275 DRIYLMGQSAGAHIAACTLLEQAIKETGEGESTTWSVSQIRAYFGLSGGIMDGEESLRQYSPEVLVQDPNTRHAVSLLPP 354 (454)
Q Consensus 275 ~rI~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~pP 354 (454)
...++.|+||||-++++.+.... ..+...+.+.-+ +.|.................|
T Consensus 89 gpLi~GGkSmGGR~aSmvade~~--------------A~i~~L~clgYP----------fhppGKPe~~Rt~HL~gl~tP 144 (213)
T COG3571 89 GPLIIGGKSMGGRVASMVADELQ--------------APIDGLVCLGYP----------FHPPGKPEQLRTEHLTGLKTP 144 (213)
T ss_pred CceeeccccccchHHHHHHHhhc--------------CCcceEEEecCc----------cCCCCCcccchhhhccCCCCC
Confidence 68999999999999998876521 112222221110 111111111122233345569
Q ss_pred EEEEEeCCCCCCChHHHHHHHHHHHHcCCCEEEEEeCCCCcc
Q 012898 355 IILFHGTADYSIPADASKNFANTLQRVGVRAESILYEGKTHT 396 (454)
Q Consensus 355 vLiihGe~D~~Vp~~~s~~l~~~l~~~g~~vel~~~~g~~H~ 396 (454)
++|+||+.|.+-..++.. ... ...+.|++.++++.|.
T Consensus 145 tli~qGtrD~fGtr~~Va---~y~--ls~~iev~wl~~adHD 181 (213)
T COG3571 145 TLITQGTRDEFGTRDEVA---GYA--LSDPIEVVWLEDADHD 181 (213)
T ss_pred eEEeecccccccCHHHHH---hhh--cCCceEEEEeccCccc
Confidence 999999999986665542 221 2347999999999996
No 131
>KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism]
Probab=98.48 E-value=3e-06 Score=86.52 Aligned_cols=228 Identities=14% Similarity=0.152 Sum_probs=132.9
Q ss_pred CCCCeeEEEEeeCCCCCCCcEEEEEcCCCccCCcccc-----hhHHHHHHHhCCcEEEEEecCCCCCC------------
Q 012898 185 DQPRNRLDLYFPKSSDGPKPVVAFITGGAWIIGYKAW-----GSLLGQQLSERDIIVACIDYRNFPQG------------ 247 (454)
Q Consensus 185 ~~~~~~l~vy~P~~~~~~~Pvvv~~HGgg~~~g~~~~-----~~~~~~~la~~G~~Vv~~dyr~~~~~------------ 247 (454)
++++-.+.+.+-....+++|+|++.||- ...+..| ...++-.|+++||.|+.-+-||...+
T Consensus 55 T~DgYiL~lhRIp~~~~~rp~Vll~HGL--l~sS~~Wv~n~p~~sLaf~LadaGYDVWLgN~RGn~ySr~h~~l~~~~~~ 132 (403)
T KOG2624|consen 55 TEDGYILTLHRIPRGKKKRPVVLLQHGL--LASSSSWVLNGPEQSLAFLLADAGYDVWLGNNRGNTYSRKHKKLSPSSDK 132 (403)
T ss_pred ccCCeEEEEeeecCCCCCCCcEEEeecc--ccccccceecCccccHHHHHHHcCCceeeecCcCcccchhhcccCCcCCc
Confidence 3444344444432222789999999993 1111111 13477889999999999999973211
Q ss_pred -C----h-hHHHHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCchHHHHHHHHHHHHHhhhCC-----CCCcccch-----
Q 012898 248 -T----I-KDMVKDASQGISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLLEQAIKETGE-----GESTTWSV----- 311 (454)
Q Consensus 248 -~----~-~~~~~D~~~al~~l~~~~~~~g~d~~rI~l~G~S~GG~la~~~a~~~~~~~~~~-----~~~~~~~~----- 311 (454)
. + .-+..|+-+.++++.+. ...+++..+|||+|+.....++...+...... .++.....
T Consensus 133 ~FW~FS~~Em~~yDLPA~IdyIL~~-----T~~~kl~yvGHSQGtt~~fv~lS~~p~~~~kI~~~~aLAP~~~~k~~~~~ 207 (403)
T KOG2624|consen 133 EFWDFSWHEMGTYDLPAMIDYILEK-----TGQEKLHYVGHSQGTTTFFVMLSERPEYNKKIKSFIALAPAAFPKHIKSL 207 (403)
T ss_pred ceeecchhhhhhcCHHHHHHHHHHh-----ccccceEEEEEEccchhheehhcccchhhhhhheeeeecchhhhcccccH
Confidence 1 1 22566999999999886 34579999999999999987776653321110 00000000
Q ss_pred -hh-----------hhhhc-----------------------------------cccCCC------------------CC
Q 012898 312 -SQ-----------IRAYF-----------------------------------GLSGGI------------------MD 326 (454)
Q Consensus 312 -~~-----------i~~~~-----------------------------------~~~g~~------------------~~ 326 (454)
.. +...+ .+.|.. ..
T Consensus 208 ~~~~~~~~~~~~~~~~~~fg~~~f~p~~~~~~~~~~~~C~~~~~~~~lC~~~~~~~~G~~~~~~n~~~~~~~~~h~pagt 287 (403)
T KOG2624|consen 208 LNKFLDPFLGAFSLLPLLFGRKEFLPSNLFIKKFARKICSGSKIFADLCSNFLFLLVGWNSNNWNTTLLPVYLAHLPAGT 287 (403)
T ss_pred HHHhhhhhhhhhhHHHHhcCCccccchhhHHHHHHHHHhcchhHHHHHHHHHHHHHcCcchHhhhhcccchhhccCCCCc
Confidence 00 00000 000000 00
Q ss_pred Chh------------hhhcCCc------cc-ccCCCccccccCCCCCEEEEEeCCCCCCChHHHHHHHHHHHHcCCCEEE
Q 012898 327 GEE------------SLRQYSP------EV-LVQDPNTRHAVSLLPPIILFHGTADYSIPADASKNFANTLQRVGVRAES 387 (454)
Q Consensus 327 ~~~------------~~~~~~p------~~-~~~~~~~~~~~~~~pPvLiihGe~D~~Vp~~~s~~l~~~l~~~g~~vel 387 (454)
... .+.+++- .. -...++..+......|+.+.+|++|.++..++.+.+...+..... ...
T Consensus 288 Svk~~~H~~Q~~~s~~f~~yD~G~~~N~~~Y~q~~pP~Y~l~~i~~P~~l~~g~~D~l~~~~DV~~~~~~~~~~~~-~~~ 366 (403)
T KOG2624|consen 288 SVKNIVHWAQIVRSGKFRKYDYGSKRNLKHYGQSTPPEYDLTNIKVPTALYYGDNDWLADPEDVLILLLVLPNSVI-KYI 366 (403)
T ss_pred cHHHHHHHHHHhcCCCccccCCCccccHhhcCCCCCCCCCccccccCEEEEecCCcccCCHHHHHHHHHhcccccc-ccc
Confidence 000 0000000 00 011222334455567999999999999999999988888775433 233
Q ss_pred EEeCCCCccccccCCCCCCcHHHHHHHHHHHHHhcC
Q 012898 388 ILYEGKTHTDLFLQDPMRGGKDDMFEDIVAIIHADD 423 (454)
Q Consensus 388 ~~~~g~~H~~~~l~~p~~~~~~~~~~~i~~Fl~~~~ 423 (454)
.-+++-+|.++... ....+++++.|++.++...
T Consensus 367 ~~~~~ynHlDFi~g---~da~~~vy~~vi~~~~~~~ 399 (403)
T KOG2624|consen 367 VPIPEYNHLDFIWG---LDAKEEVYDPVIERLRLFE 399 (403)
T ss_pred ccCCCccceeeeec---cCcHHHHHHHHHHHHHhhh
Confidence 33788899987754 3357899999999998654
No 132
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=98.42 E-value=1.5e-06 Score=80.69 Aligned_cols=188 Identities=15% Similarity=0.220 Sum_probs=113.0
Q ss_pred cchhHHHHHHHhCCcEEEEEecCCCCCCChh-----------HHHHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCchHHH
Q 012898 220 AWGSLLGQQLSERDIIVACIDYRNFPQGTIK-----------DMVKDASQGISFVCNNISEYGGDPDRIYLMGQSAGAHI 288 (454)
Q Consensus 220 ~~~~~~~~~la~~G~~Vv~~dyr~~~~~~~~-----------~~~~D~~~al~~l~~~~~~~g~d~~rI~l~G~S~GG~l 288 (454)
..|..++..+++.||.|+++|||+-+++... =...|..++++++++.... ...+.+|||+||++
T Consensus 44 ~fYRrfA~~a~~~Gf~Vlt~dyRG~g~S~p~~~~~~~~~~~DwA~~D~~aal~~~~~~~~~-----~P~y~vgHS~GGqa 118 (281)
T COG4757 44 YFYRRFAAAAAKAGFEVLTFDYRGIGQSRPASLSGSQWRYLDWARLDFPAALAALKKALPG-----HPLYFVGHSFGGQA 118 (281)
T ss_pred hHhHHHHHHhhccCceEEEEecccccCCCccccccCccchhhhhhcchHHHHHHHHhhCCC-----CceEEeecccccee
Confidence 3567788999999999999999998776532 1366899999999986532 36899999999998
Q ss_pred HHHHHHHHHHhhhCC-CCCcccch---------------------hhhhhh-----ccccCC-CCCChhhhhcCC--ccc
Q 012898 289 AACTLLEQAIKETGE-GESTTWSV---------------------SQIRAY-----FGLSGG-IMDGEESLRQYS--PEV 338 (454)
Q Consensus 289 a~~~a~~~~~~~~~~-~~~~~~~~---------------------~~i~~~-----~~~~g~-~~~~~~~~~~~~--p~~ 338 (454)
.-.+..+........ .....|.. .-++++ ++.... .......|.++. +..
T Consensus 119 ~gL~~~~~k~~a~~vfG~gagwsg~m~~~~~l~~~~l~~lv~p~lt~w~g~~p~~l~G~G~d~p~~v~RdW~RwcR~p~y 198 (281)
T COG4757 119 LGLLGQHPKYAAFAVFGSGAGWSGWMGLRERLGAVLLWNLVGPPLTFWKGYMPKDLLGLGSDLPGTVMRDWARWCRHPRY 198 (281)
T ss_pred ecccccCcccceeeEeccccccccchhhhhcccceeeccccccchhhccccCcHhhcCCCccCcchHHHHHHHHhcCccc
Confidence 766554421110000 00000100 001111 110000 001112233332 222
Q ss_pred ccCCCccc----cccCCCCCEEEEEeCCCCCCChHHHHHHHHHHHHcCCCEEEEEeCCC----CccccccCCCCCCcHHH
Q 012898 339 LVQDPNTR----HAVSLLPPIILFHGTADYSIPADASKNFANTLQRVGVRAESILYEGK----THTDLFLQDPMRGGKDD 410 (454)
Q Consensus 339 ~~~~~~~~----~~~~~~pPvLiihGe~D~~Vp~~~s~~l~~~l~~~g~~vel~~~~g~----~H~~~~l~~p~~~~~~~ 410 (454)
+..++.+. .......|++.+..++|+-+|....+.|.+....+ +.+.+.++.+ ||...+-+ ..+.
T Consensus 199 ~fddp~~~~~~q~yaaVrtPi~~~~~~DD~w~P~As~d~f~~~y~nA--pl~~~~~~~~~~~lGH~gyfR~-----~~Ea 271 (281)
T COG4757 199 YFDDPAMRNYRQVYAAVRTPITFSRALDDPWAPPASRDAFASFYRNA--PLEMRDLPRAEGPLGHMGYFRE-----PFEA 271 (281)
T ss_pred cccChhHhHHHHHHHHhcCceeeeccCCCCcCCHHHHHHHHHhhhcC--cccceecCcccCcccchhhhcc-----chHH
Confidence 22222221 12233469999999999999999999999888744 6777777665 89855432 3477
Q ss_pred HHHHHHHHH
Q 012898 411 MFEDIVAII 419 (454)
Q Consensus 411 ~~~~i~~Fl 419 (454)
+++++++|+
T Consensus 272 lwk~~L~w~ 280 (281)
T COG4757 272 LWKEMLGWF 280 (281)
T ss_pred HHHHHHHhh
Confidence 888888875
No 133
>COG0627 Predicted esterase [General function prediction only]
Probab=98.41 E-value=1.2e-06 Score=86.84 Aligned_cols=225 Identities=17% Similarity=0.173 Sum_probs=120.7
Q ss_pred EEEEeeCCC-----CCCCcEEEEEcCCCccCCcccchhHHHHHHHhCCcEEEEEecC--------------CCCCCChhH
Q 012898 191 LDLYFPKSS-----DGPKPVVAFITGGAWIIGYKAWGSLLGQQLSERDIIVACIDYR--------------NFPQGTIKD 251 (454)
Q Consensus 191 l~vy~P~~~-----~~~~Pvvv~~HGgg~~~g~~~~~~~~~~~la~~G~~Vv~~dyr--------------~~~~~~~~~ 251 (454)
+.+++|..+ ..+.||+++.||-.....+.-....+.+.....|++++++|-. +...+.+..
T Consensus 37 ~~v~~~~~p~s~~m~~~ipV~~~l~G~t~~~~~~~~~~g~~~~a~~~g~~~~~p~t~~~~~~~~~~vv~p~G~~~sfY~d 116 (316)
T COG0627 37 FPVELPPVPASPSMGRDIPVLYLLSGLTCNEPNVYLLDGLRRQADESGWAVVTPDTSPRGAGVNISVVMPLGGGASFYSD 116 (316)
T ss_pred cccccCCcccccccCCCCCEEEEeCCCCCCCCceEeccchhhhhhhcCeEEecCCCCcccCCCCccccccCCCccceecc
Confidence 667777654 3678999999994211101111223445556669999998433 111111111
Q ss_pred HHH----H-HHHHHHHHHHhh-----hhcCCCC--CcEEEEEcCchHHHHHHHHHHHHHhhhCCCCCc-ccchhh---hh
Q 012898 252 MVK----D-ASQGISFVCNNI-----SEYGGDP--DRIYLMGQSAGAHIAACTLLEQAIKETGEGEST-TWSVSQ---IR 315 (454)
Q Consensus 252 ~~~----D-~~~al~~l~~~~-----~~~g~d~--~rI~l~G~S~GG~la~~~a~~~~~~~~~~~~~~-~~~~~~---i~ 315 (454)
... . -..-..+|.+++ +.|..+. ++.+|+||||||+-|+.+|++++++........ ...+.. ..
T Consensus 117 ~~~~~~~~~~~q~~tfl~~ELP~~~~~~f~~~~~~~~~aI~G~SMGG~GAl~lA~~~pd~f~~~sS~Sg~~~~s~~~~~~ 196 (316)
T COG0627 117 WTQPPWASGPYQWETFLTQELPALWEAAFPADGTGDGRAIAGHSMGGYGALKLALKHPDRFKSASSFSGILSPSSPWGPT 196 (316)
T ss_pred cccCccccCccchhHHHHhhhhHHHHHhcCcccccCCceeEEEeccchhhhhhhhhCcchhceecccccccccccccccc
Confidence 000 0 011112222221 2344444 389999999999999999999865543221100 000000 00
Q ss_pred hhcccc-CC-----CC-CC-hhhhhcCCcccccCC---C---ccccccCCCCCEEEEEeCCCCCCC--hHHHHHHHHHHH
Q 012898 316 AYFGLS-GG-----IM-DG-EESLRQYSPEVLVQD---P---NTRHAVSLLPPIILFHGTADYSIP--ADASKNFANTLQ 379 (454)
Q Consensus 316 ~~~~~~-g~-----~~-~~-~~~~~~~~p~~~~~~---~---~~~~~~~~~pPvLiihGe~D~~Vp--~~~s~~l~~~l~ 379 (454)
...... |. .+ .. ...+..+++...... . .........+++++-+|..|.... ....+.+.+++.
T Consensus 197 ~~~~~~~g~~~~~~~~G~~~~~~w~~~D~~~~~~~l~~~~~~~~~~~~~~~~~~~~d~g~ad~~~~~~~~~~~~~~~a~~ 276 (316)
T COG0627 197 LAMGDPWGGKAFNAMLGPDSDPAWQENDPLSLIEKLVANANTRIWVYGGSPPELLIDNGPADFFLAANNLSTRAFAEALR 276 (316)
T ss_pred ccccccccCccHHHhcCCCccccccccCchhHHHHhhhcccccceecccCCCccccccccchhhhhhcccCHHHHHHHHH
Confidence 000000 10 00 00 113344443332221 0 000110044678888999998753 235889999999
Q ss_pred HcCCCEEEEEeCCCCccccccCCCCCCcHHHHHHHHHHHHHhcC
Q 012898 380 RVGVRAESILYEGKTHTDLFLQDPMRGGKDDMFEDIVAIIHADD 423 (454)
Q Consensus 380 ~~g~~vel~~~~g~~H~~~~l~~p~~~~~~~~~~~i~~Fl~~~~ 423 (454)
+.|.+.++...++++|.+.+ ....+++.+.|+.+..
T Consensus 277 ~~g~~~~~~~~~~G~Hsw~~--------w~~~l~~~~~~~a~~l 312 (316)
T COG0627 277 AAGIPNGVRDQPGGDHSWYF--------WASQLADHLPWLAGAL 312 (316)
T ss_pred hcCCCceeeeCCCCCcCHHH--------HHHHHHHHHHHHHHHh
Confidence 99999999999999999665 4577888888887654
No 134
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=98.40 E-value=2.3e-06 Score=93.69 Aligned_cols=91 Identities=16% Similarity=0.133 Sum_probs=64.5
Q ss_pred CCcEEEEEcCCCccCCcccchhHHHHHHHhCCcEEEEEecCCCCCCChh------------------------------H
Q 012898 202 PKPVVAFITGGAWIIGYKAWGSLLGQQLSERDIIVACIDYRNFPQGTIK------------------------------D 251 (454)
Q Consensus 202 ~~Pvvv~~HGgg~~~g~~~~~~~~~~~la~~G~~Vv~~dyr~~~~~~~~------------------------------~ 251 (454)
..|+||++||- .+....+..+++.|+++||.|+++|+|+++++.+. .
T Consensus 448 g~P~VVllHG~---~g~~~~~~~lA~~La~~Gy~VIaiDlpGHG~S~~~~~~~~~~a~~~~~~~y~Nl~~l~~aRDn~rQ 524 (792)
T TIGR03502 448 GWPVVIYQHGI---TGAKENALAFAGTLAAAGVATIAIDHPLHGARSFDANASGVNATNANVLAYMNLASLLVARDNLRQ 524 (792)
T ss_pred CCcEEEEeCCC---CCCHHHHHHHHHHHHhCCcEEEEeCCCCCCccccccccccccccccCccceeccccccccccCHHH
Confidence 35799999993 45666778889999999999999999998876332 2
Q ss_pred HHHHHHHHHHHHH------Hhhhhc-CCCCCcEEEEEcCchHHHHHHHHHH
Q 012898 252 MVKDASQGISFVC------NNISEY-GGDPDRIYLMGQSAGAHIAACTLLE 295 (454)
Q Consensus 252 ~~~D~~~al~~l~------~~~~~~-g~d~~rI~l~G~S~GG~la~~~a~~ 295 (454)
.+.|+......+. +....+ ..+..+|.++||||||.++..++..
T Consensus 525 ~v~Dll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~~ 575 (792)
T TIGR03502 525 SILDLLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIAY 575 (792)
T ss_pred HHHHHHHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHHh
Confidence 2344444444333 110001 1456799999999999999988865
No 135
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=98.37 E-value=1.1e-05 Score=73.63 Aligned_cols=83 Identities=20% Similarity=0.411 Sum_probs=58.1
Q ss_pred EEEEEcC-CCccCCcccchhHHHHHHHhCCcEEEEEecCCC--CCCChhHHHHHHHHHHHHHHHhhhhcCCCCCcEEEEE
Q 012898 205 VVAFITG-GAWIIGYKAWGSLLGQQLSERDIIVACIDYRNF--PQGTIKDMVKDASQGISFVCNNISEYGGDPDRIYLMG 281 (454)
Q Consensus 205 vvv~~HG-gg~~~g~~~~~~~~~~~la~~G~~Vv~~dyr~~--~~~~~~~~~~D~~~al~~l~~~~~~~g~d~~rI~l~G 281 (454)
++||+-| ||| ......+++.|+++|+.|+.+|-.-+ .+........|+...++...+. ++ .+++.|+|
T Consensus 4 ~~v~~SGDgGw----~~~d~~~a~~l~~~G~~VvGvdsl~Yfw~~rtP~~~a~Dl~~~i~~y~~~---w~--~~~vvLiG 74 (192)
T PF06057_consen 4 LAVFFSGDGGW----RDLDKQIAEALAKQGVPVVGVDSLRYFWSERTPEQTAADLARIIRHYRAR---WG--RKRVVLIG 74 (192)
T ss_pred EEEEEeCCCCc----hhhhHHHHHHHHHCCCeEEEechHHHHhhhCCHHHHHHHHHHHHHHHHHH---hC--CceEEEEe
Confidence 5677777 444 34445689999999999999996532 2223334566777777766554 33 35999999
Q ss_pred cCchHHHHHHHHHHH
Q 012898 282 QSAGAHIAACTLLEQ 296 (454)
Q Consensus 282 ~S~GG~la~~~a~~~ 296 (454)
+|.|+.+.-....+-
T Consensus 75 YSFGADvlP~~~nrL 89 (192)
T PF06057_consen 75 YSFGADVLPFIYNRL 89 (192)
T ss_pred ecCCchhHHHHHhhC
Confidence 999999887766553
No 136
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=98.33 E-value=1.3e-05 Score=82.00 Aligned_cols=71 Identities=11% Similarity=0.123 Sum_probs=55.4
Q ss_pred cCCC-CCEEEEEeCCCCCCChHHHHHHHHHHHHcCC-CEEEEEeCCCCccccccCCCCCCcHHHHHHHHHHHHHhc
Q 012898 349 VSLL-PPIILFHGTADYSIPADASKNFANTLQRVGV-RAESILYEGKTHTDLFLQDPMRGGKDDMFEDIVAIIHAD 422 (454)
Q Consensus 349 ~~~~-pPvLiihGe~D~~Vp~~~s~~l~~~l~~~g~-~vel~~~~g~~H~~~~l~~p~~~~~~~~~~~i~~Fl~~~ 422 (454)
.++. .|+|.+-|+.|.++|..++..+.+.+...+. ..+.++.+++||..++.. ....++++..|.+||.++
T Consensus 334 ~~I~~~pll~V~ge~D~I~p~~qt~aa~~l~~~~~s~~k~~~~~~~~GH~Gvf~G---~r~~~~i~P~i~~wl~~~ 406 (406)
T TIGR01849 334 GAITRVALLTVEGENDDISGLGQTKAALRLCTGIPEDMKRHHLQPGVGHYGVFSG---SRFREEIYPLVREFIRRN 406 (406)
T ss_pred HHCcccceEEEeccCCCcCCHHHhHHHHHHhhcCChhhceEeecCCCCeEEEeeC---hhhhhhhchHHHHHHHhC
Confidence 3345 7999999999999999999999998743332 456777888999988754 234578889999999764
No 137
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=98.32 E-value=2.8e-05 Score=74.71 Aligned_cols=93 Identities=19% Similarity=0.197 Sum_probs=73.3
Q ss_pred CCCcEEEEEcCCCccCCcccchhHHHHHHHhCCcEEEEEecCCCCCCChhH-HHHHHHHHHHHHHHhhhhcCCCCCcEEE
Q 012898 201 GPKPVVAFITGGAWIIGYKAWGSLLGQQLSERDIIVACIDYRNFPQGTIKD-MVKDASQGISFVCNNISEYGGDPDRIYL 279 (454)
Q Consensus 201 ~~~Pvvv~~HGgg~~~g~~~~~~~~~~~la~~G~~Vv~~dyr~~~~~~~~~-~~~D~~~al~~l~~~~~~~g~d~~rI~l 279 (454)
.+..+||=+||. -|+..++.++...|.+.|+.++.++|+|++....+. ....-..-..|+.+.+++.+++ +++..
T Consensus 33 s~~gTVv~~hGs---PGSH~DFkYi~~~l~~~~iR~I~iN~PGf~~t~~~~~~~~~n~er~~~~~~ll~~l~i~-~~~i~ 108 (297)
T PF06342_consen 33 SPLGTVVAFHGS---PGSHNDFKYIRPPLDEAGIRFIGINYPGFGFTPGYPDQQYTNEERQNFVNALLDELGIK-GKLIF 108 (297)
T ss_pred CCceeEEEecCC---CCCccchhhhhhHHHHcCeEEEEeCCCCCCCCCCCcccccChHHHHHHHHHHHHHcCCC-CceEE
Confidence 446699999994 588888899999999999999999999988765432 2222233446666666777787 79999
Q ss_pred EEcCchHHHHHHHHHHHH
Q 012898 280 MGQSAGAHIAACTLLEQA 297 (454)
Q Consensus 280 ~G~S~GG~la~~~a~~~~ 297 (454)
+|||.|+-.|+.++..++
T Consensus 109 ~gHSrGcenal~la~~~~ 126 (297)
T PF06342_consen 109 LGHSRGCENALQLAVTHP 126 (297)
T ss_pred EEeccchHHHHHHHhcCc
Confidence 999999999999998763
No 138
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=98.31 E-value=2.9e-06 Score=87.65 Aligned_cols=92 Identities=22% Similarity=0.245 Sum_probs=61.1
Q ss_pred CCCcEEEEEcCCCccCCc-ccchhHHHHHHHh-C-CcEEEEEecCCCCCCChhHH-------HHHHHHHHHHHHHhhhhc
Q 012898 201 GPKPVVAFITGGAWIIGY-KAWGSLLGQQLSE-R-DIIVACIDYRNFPQGTIKDM-------VKDASQGISFVCNNISEY 270 (454)
Q Consensus 201 ~~~Pvvv~~HGgg~~~g~-~~~~~~~~~~la~-~-G~~Vv~~dyr~~~~~~~~~~-------~~D~~~al~~l~~~~~~~ 270 (454)
...|++|++||-+. .+. ..+...+.+.|.. . ++.|+++|+++++....+.. -.++...++++.+. +
T Consensus 39 ~~~ptvIlIHG~~~-s~~~~~w~~~l~~al~~~~~d~nVI~VDw~g~g~s~y~~a~~~t~~vg~~la~lI~~L~~~---~ 114 (442)
T TIGR03230 39 HETKTFIVIHGWTV-TGMFESWVPKLVAALYEREPSANVIVVDWLSRAQQHYPTSAAYTKLVGKDVAKFVNWMQEE---F 114 (442)
T ss_pred CCCCeEEEECCCCc-CCcchhhHHHHHHHHHhccCCCEEEEEECCCcCCCCCccccccHHHHHHHHHHHHHHHHHh---h
Confidence 45789999999431 121 2233345555543 2 69999999998876554321 23444555555443 3
Q ss_pred CCCCCcEEEEEcCchHHHHHHHHHHH
Q 012898 271 GGDPDRIYLMGQSAGAHIAACTLLEQ 296 (454)
Q Consensus 271 g~d~~rI~l~G~S~GG~la~~~a~~~ 296 (454)
+.+.+++.|+|||+||++|..++...
T Consensus 115 gl~l~~VhLIGHSLGAhIAg~ag~~~ 140 (442)
T TIGR03230 115 NYPWDNVHLLGYSLGAHVAGIAGSLT 140 (442)
T ss_pred CCCCCcEEEEEECHHHHHHHHHHHhC
Confidence 56778999999999999999987653
No 139
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=98.26 E-value=4.1e-06 Score=81.16 Aligned_cols=66 Identities=15% Similarity=0.364 Sum_probs=54.2
Q ss_pred CCEEEEEeCCCCCCChHHHHHHHHHHHHcCCCEEEEEeCCCCccccccCCCCCCcHHHHHHHHHHHHHhcC
Q 012898 353 PPIILFHGTADYSIPADASKNFANTLQRVGVRAESILYEGKTHTDLFLQDPMRGGKDDMFEDIVAIIHADD 423 (454)
Q Consensus 353 pPvLiihGe~D~~Vp~~~s~~l~~~l~~~g~~vel~~~~g~~H~~~~l~~p~~~~~~~~~~~i~~Fl~~~~ 423 (454)
.|+|++||+.|..||...++.+++..+.. +.+..++++++|...+... ....+.++++.+|+.+..
T Consensus 233 ~P~l~~~G~~D~~vp~~~~~~~~~~~~~~--~~~~~~~~~~~H~~~~~~~---~~~~~~~~~~~~f~~~~l 298 (299)
T COG1073 233 RPVLLVHGERDEVVPLRDAEDLYEAARER--PKKLLFVPGGGHIDLYDNP---PAVEQALDKLAEFLERHL 298 (299)
T ss_pred cceEEEecCCCcccchhhhHHHHhhhccC--CceEEEecCCccccccCcc---HHHHHHHHHHHHHHHHhc
Confidence 59999999999999999999999988764 6788899999998554222 234589999999998764
No 140
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=98.26 E-value=1.3e-05 Score=77.26 Aligned_cols=193 Identities=13% Similarity=0.132 Sum_probs=106.6
Q ss_pred cEEEEEcCCCccCCcccchhHHHHHHH-hCC----cEEEEEecCC------C--CC---------------CChhHHHHH
Q 012898 204 PVVAFITGGAWIIGYKAWGSLLGQQLS-ERD----IIVACIDYRN------F--PQ---------------GTIKDMVKD 255 (454)
Q Consensus 204 Pvvv~~HGgg~~~g~~~~~~~~~~~la-~~G----~~Vv~~dyr~------~--~~---------------~~~~~~~~D 255 (454)
-..|||||- .|+...+..+.+.+. +.| ..++.++--| . .. ........-
T Consensus 12 tPTifihG~---~gt~~s~~~mi~~~~~~~~~~~~~l~v~V~~~G~v~~~G~~~~~~~nPiIqV~F~~n~~~~~~~qa~w 88 (255)
T PF06028_consen 12 TPTIFIHGY---GGTANSFNHMINRLENKQGVAQKVLTVTVSKNGKVKVSGKLSKNAKNPIIQVNFEDNRNANYKKQAKW 88 (255)
T ss_dssp EEEEEE--T---TGGCCCCHHHHHHHHHCSTS-S-EEEEEEETTSEEEEES---TT-SS-EEEEEESSTT-CHHHHHHHH
T ss_pred CcEEEECCC---CCChhHHHHHHHHHHhhcCCCceEEEEEECCCCeEEEeeecCCCCCCCEEEEEecCCCcCCHHHHHHH
Confidence 357899994 355556667888886 554 2233333222 0 00 011122333
Q ss_pred HHHHHHHHHHhhhhcCCCCCcEEEEEcCchHHHHHHHHHHHHHhhhCCCCCcccchhhhhhhccccCCCCCChhh-----
Q 012898 256 ASQGISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLLEQAIKETGEGESTTWSVSQIRAYFGLSGGIMDGEES----- 330 (454)
Q Consensus 256 ~~~al~~l~~~~~~~g~d~~rI~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~----- 330 (454)
+..++.+|++ +|++ +++-++||||||..+..++..+.... ..+.+..++.+.++.......
T Consensus 89 l~~vl~~L~~---~Y~~--~~~N~VGHSmGg~~~~~yl~~~~~~~---------~~P~l~K~V~Ia~pfng~~~~~~~~~ 154 (255)
T PF06028_consen 89 LKKVLKYLKK---KYHF--KKFNLVGHSMGGLSWTYYLENYGNDK---------NLPKLNKLVTIAGPFNGILGMNDDQN 154 (255)
T ss_dssp HHHHHHHHHH---CC----SEEEEEEETHHHHHHHHHHHHCTTGT---------TS-EEEEEEEES--TTTTTCCSC-TT
T ss_pred HHHHHHHHHH---hcCC--CEEeEEEECccHHHHHHHHHHhccCC---------CCcccceEEEeccccCccccccccch
Confidence 4445555544 3455 59999999999999999988753321 123455555555532111000
Q ss_pred hhcCCccc-ccCCCcc-------ccccCCCCCEEEEEeC------CCCCCChHHHHHHHHHHHHcCCCEEEEEeCC--CC
Q 012898 331 LRQYSPEV-LVQDPNT-------RHAVSLLPPIILFHGT------ADYSIPADASKNFANTLQRVGVRAESILYEG--KT 394 (454)
Q Consensus 331 ~~~~~p~~-~~~~~~~-------~~~~~~~pPvLiihGe------~D~~Vp~~~s~~l~~~l~~~g~~vel~~~~g--~~ 394 (454)
........ ......+ .........+|-|.|+ .|..||...++.+...++......+-.++.| +.
T Consensus 155 ~~~~~~~gp~~~~~~y~~l~~~~~~~~p~~i~VLnI~G~~~~g~~sDG~V~~~Ss~sl~~L~~~~~~~Y~e~~v~G~~a~ 234 (255)
T PF06028_consen 155 QNDLNKNGPKSMTPMYQDLLKNRRKNFPKNIQVLNIYGDLEDGSNSDGIVPNASSLSLRYLLKNRAKSYQEKTVTGKDAQ 234 (255)
T ss_dssp TT-CSTT-BSS--HHHHHHHHTHGGGSTTT-EEEEEEEESBTTCSBTSSSBHHHHCTHHHHCTTTSSEEEEEEEESGGGS
T ss_pred hhhhcccCCcccCHHHHHHHHHHHhhCCCCeEEEEEecccCCCCCCCeEEeHHHHHHHHHHhhcccCceEEEEEECCCCc
Confidence 00000000 0000000 1122223369999999 8999999999999999887777788888876 48
Q ss_pred ccccccCCCCCCcHHHHHHHHHHHHH
Q 012898 395 HTDLFLQDPMRGGKDDMFEDIVAIIH 420 (454)
Q Consensus 395 H~~~~l~~p~~~~~~~~~~~i~~Fl~ 420 (454)
|..+. +..++.+.|.+||-
T Consensus 235 HS~Lh-------eN~~V~~~I~~FLw 253 (255)
T PF06028_consen 235 HSQLH-------ENPQVDKLIIQFLW 253 (255)
T ss_dssp CCGGG-------CCHHHHHHHHHHHC
T ss_pred cccCC-------CCHHHHHHHHHHhc
Confidence 98444 23688899999984
No 141
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=98.20 E-value=2.5e-05 Score=76.13 Aligned_cols=92 Identities=22% Similarity=0.303 Sum_probs=65.6
Q ss_pred CcEEEEEcCCCccCCcccchhHHHHHHHhC---CcEEEEEecCCCCCCChh---------HHHHH-HHHHHHHHHHhhhh
Q 012898 203 KPVVAFITGGAWIIGYKAWGSLLGQQLSER---DIIVACIDYRNFPQGTIK---------DMVKD-ASQGISFVCNNISE 269 (454)
Q Consensus 203 ~Pvvv~~HGgg~~~g~~~~~~~~~~~la~~---G~~Vv~~dyr~~~~~~~~---------~~~~D-~~~al~~l~~~~~~ 269 (454)
++++|||.|+. |-..+|..+.+.|.+. .+.|+++.+.|+...... -.++| +...++++.+.+..
T Consensus 2 ~~li~~IPGNP---Glv~fY~~Fl~~L~~~l~~~~~i~~ish~Gh~~~~~~~~~~~~~~~~sL~~QI~hk~~~i~~~~~~ 78 (266)
T PF10230_consen 2 RPLIVFIPGNP---GLVEFYEEFLSALYEKLNPQFEILGISHAGHSTSPSNSKFSPNGRLFSLQDQIEHKIDFIKELIPQ 78 (266)
T ss_pred cEEEEEECCCC---ChHHHHHHHHHHHHHhCCCCCeeEEecCCCCcCCcccccccCCCCccCHHHHHHHHHHHHHHHhhh
Confidence 46899999965 6667788788888755 799999999886443322 12333 33455666665554
Q ss_pred cCCCCCcEEEEEcCchHHHHHHHHHHHH
Q 012898 270 YGGDPDRIYLMGQSAGAHIAACTLLEQA 297 (454)
Q Consensus 270 ~g~d~~rI~l~G~S~GG~la~~~a~~~~ 297 (454)
......+++|+|||.|+++++.++.+..
T Consensus 79 ~~~~~~~liLiGHSIGayi~levl~r~~ 106 (266)
T PF10230_consen 79 KNKPNVKLILIGHSIGAYIALEVLKRLP 106 (266)
T ss_pred hcCCCCcEEEEeCcHHHHHHHHHHHhcc
Confidence 3324468999999999999999998866
No 142
>COG2936 Predicted acyl esterases [General function prediction only]
Probab=98.19 E-value=2.1e-05 Score=82.82 Aligned_cols=114 Identities=16% Similarity=0.062 Sum_probs=82.0
Q ss_pred ceeccCCCCeeEEEEeeCCCCCCCcEEEEEcCCCccCCc--ccchhHHHH---HHHhCCcEEEEEecCCCCCCCh-----
Q 012898 180 GIVYGDQPRNRLDLYFPKSSDGPKPVVAFITGGAWIIGY--KAWGSLLGQ---QLSERDIIVACIDYRNFPQGTI----- 249 (454)
Q Consensus 180 ~v~y~~~~~~~l~vy~P~~~~~~~Pvvv~~HGgg~~~g~--~~~~~~~~~---~la~~G~~Vv~~dyr~~~~~~~----- 249 (454)
.|.-.++.++..+||+|++. ++.||++..+-..+.... ......... .++.+||+||..|-||.+.+..
T Consensus 23 ~V~MRDGvrL~~dIy~Pa~~-g~~Pvll~~~~~Py~k~~~~~~~~~~~~p~~~~~aa~GYavV~qDvRG~~~SeG~~~~~ 101 (563)
T COG2936 23 MVPMRDGVRLAADIYRPAGA-GPLPVLLSRTRLPYRKRNGTFGPQLSALPQPAWFAAQGYAVVNQDVRGRGGSEGVFDPE 101 (563)
T ss_pred eEEecCCeEEEEEEEccCCC-CCCceeEEeeccccccccccCcchhhcccccceeecCceEEEEecccccccCCccccee
Confidence 34445666678899999874 789999999833332221 111122233 7889999999999999765532
Q ss_pred -hHHHHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCchHHHHHHHHHHHHH
Q 012898 250 -KDMVKDASQGISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLLEQAI 298 (454)
Q Consensus 250 -~~~~~D~~~al~~l~~~~~~~g~d~~rI~l~G~S~GG~la~~~a~~~~~ 298 (454)
....+|..+.|+|+.+..- ...+|+.+|.|.+|...+.+|..++.
T Consensus 102 ~~~E~~Dg~D~I~Wia~QpW----sNG~Vgm~G~SY~g~tq~~~Aa~~pP 147 (563)
T COG2936 102 SSREAEDGYDTIEWLAKQPW----SNGNVGMLGLSYLGFTQLAAAALQPP 147 (563)
T ss_pred ccccccchhHHHHHHHhCCc----cCCeeeeecccHHHHHHHHHHhcCCc
Confidence 2257799999999998643 33589999999999999998887543
No 143
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=98.17 E-value=2.4e-05 Score=73.79 Aligned_cols=87 Identities=15% Similarity=0.056 Sum_probs=58.1
Q ss_pred EEEEEcCCCccCCcccchhHHHHHHHhCCcEEEEEecCCCCCCC-hhHHHHHHH-HHHHHHHHhhhhcCCCCCcEEEEEc
Q 012898 205 VVAFITGGAWIIGYKAWGSLLGQQLSERDIIVACIDYRNFPQGT-IKDMVKDAS-QGISFVCNNISEYGGDPDRIYLMGQ 282 (454)
Q Consensus 205 vvv~~HGgg~~~g~~~~~~~~~~~la~~G~~Vv~~dyr~~~~~~-~~~~~~D~~-~al~~l~~~~~~~g~d~~rI~l~G~ 282 (454)
.|++||++| |+...|..+++.+...++.|+.+++++..... ....+++.. ..++.|++. . ...++.|+||
T Consensus 2 ~lf~~p~~g---G~~~~y~~la~~l~~~~~~v~~i~~~~~~~~~~~~~si~~la~~y~~~I~~~----~-~~gp~~L~G~ 73 (229)
T PF00975_consen 2 PLFCFPPAG---GSASSYRPLARALPDDVIGVYGIEYPGRGDDEPPPDSIEELASRYAEAIRAR----Q-PEGPYVLAGW 73 (229)
T ss_dssp EEEEESSTT---CSGGGGHHHHHHHTTTEEEEEEECSTTSCTTSHEESSHHHHHHHHHHHHHHH----T-SSSSEEEEEE
T ss_pred eEEEEcCCc---cCHHHHHHHHHhCCCCeEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHhhhh----C-CCCCeeehcc
Confidence 689999975 67778888888888767889999998875222 122222211 222333332 1 2238999999
Q ss_pred CchHHHHHHHHHHHHHh
Q 012898 283 SAGAHIAACTLLEQAIK 299 (454)
Q Consensus 283 S~GG~la~~~a~~~~~~ 299 (454)
|+||.+|..+|.+-...
T Consensus 74 S~Gg~lA~E~A~~Le~~ 90 (229)
T PF00975_consen 74 SFGGILAFEMARQLEEA 90 (229)
T ss_dssp THHHHHHHHHHHHHHHT
T ss_pred CccHHHHHHHHHHHHHh
Confidence 99999999998764433
No 144
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=98.15 E-value=7.8e-06 Score=64.38 Aligned_cols=55 Identities=22% Similarity=0.233 Sum_probs=45.9
Q ss_pred eeEEEEeeCCCCCCCcEEEEEcCCCccCCcccchhHHHHHHHhCCcEEEEEecCCCCCCC
Q 012898 189 NRLDLYFPKSSDGPKPVVAFITGGAWIIGYKAWGSLLGQQLSERDIIVACIDYRNFPQGT 248 (454)
Q Consensus 189 ~~l~vy~P~~~~~~~Pvvv~~HGgg~~~g~~~~~~~~~~~la~~G~~Vv~~dyr~~~~~~ 248 (454)
+..+.|.|+++ ++.+|+++||-+ .....+..+++.|+++||.|+++|+|+++.+.
T Consensus 4 L~~~~w~p~~~--~k~~v~i~HG~~---eh~~ry~~~a~~L~~~G~~V~~~D~rGhG~S~ 58 (79)
T PF12146_consen 4 LFYRRWKPENP--PKAVVVIVHGFG---EHSGRYAHLAEFLAEQGYAVFAYDHRGHGRSE 58 (79)
T ss_pred EEEEEecCCCC--CCEEEEEeCCcH---HHHHHHHHHHHHHHhCCCEEEEECCCcCCCCC
Confidence 45778888764 678999999954 34457888999999999999999999998875
No 145
>PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins.
Probab=98.14 E-value=4.8e-05 Score=72.81 Aligned_cols=63 Identities=17% Similarity=0.221 Sum_probs=56.4
Q ss_pred CCCEEEEEeCCCCCCChHHHHHHHHHHHHcCCCEEEEEeCCCCccccccCCCCCCcHHHHHHHHHHHH
Q 012898 352 LPPIILFHGTADYSIPADASKNFANTLQRVGVRAESILYEGKTHTDLFLQDPMRGGKDDMFEDIVAII 419 (454)
Q Consensus 352 ~pPvLiihGe~D~~Vp~~~s~~l~~~l~~~g~~vel~~~~g~~H~~~~l~~p~~~~~~~~~~~i~~Fl 419 (454)
.+|-|.+.++.|.+++.++.+++++..++.|.+++...+++..|+..+..+ .+++++.+.+|+
T Consensus 178 ~~p~lylYS~~D~l~~~~~ve~~~~~~~~~G~~V~~~~f~~S~HV~H~r~~-----p~~Y~~~v~~fw 240 (240)
T PF05705_consen 178 RCPRLYLYSKADPLIPWRDVEEHAEEARRKGWDVRAEKFEDSPHVAHLRKH-----PDRYWRAVDEFW 240 (240)
T ss_pred CCCeEEecCCCCcCcCHHHHHHHHHHHHHcCCeEEEecCCCCchhhhcccC-----HHHHHHHHHhhC
Confidence 358999999999999999999999999999999999999999999665544 489999998874
No 146
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=98.14 E-value=3.3e-05 Score=69.06 Aligned_cols=118 Identities=11% Similarity=0.076 Sum_probs=80.8
Q ss_pred CCcEEEEEcCchHHHHHHHHHHHHHhhhCCCCCcccchhhhhhhccccCCCCCCh----hhhhcCCcccccCCCcccccc
Q 012898 274 PDRIYLMGQSAGAHIAACTLLEQAIKETGEGESTTWSVSQIRAYFGLSGGIMDGE----ESLRQYSPEVLVQDPNTRHAV 349 (454)
Q Consensus 274 ~~rI~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~~i~~~~~~~g~~~~~~----~~~~~~~p~~~~~~~~~~~~~ 349 (454)
++.++|++||.|+.++++++.+.. ..+.+.+.+.+...... .....+.+......
T Consensus 58 ~~~~vlVAHSLGc~~v~h~~~~~~--------------~~V~GalLVAppd~~~~~~~~~~~~tf~~~p~~~l------- 116 (181)
T COG3545 58 EGPVVLVAHSLGCATVAHWAEHIQ--------------RQVAGALLVAPPDVSRPEIRPKHLMTFDPIPREPL------- 116 (181)
T ss_pred CCCeEEEEecccHHHHHHHHHhhh--------------hccceEEEecCCCccccccchhhccccCCCccccC-------
Confidence 456999999999999999987642 24555666655322221 12222222221111
Q ss_pred CCCCCEEEEEeCCCCCCChHHHHHHHHHHHHcCCCEEEEEeCCCCccccccCCCCCCcHHHHHHHHHHHHHhc
Q 012898 350 SLLPPIILFHGTADYSIPADASKNFANTLQRVGVRAESILYEGKTHTDLFLQDPMRGGKDDMFEDIVAIIHAD 422 (454)
Q Consensus 350 ~~~pPvLiihGe~D~~Vp~~~s~~l~~~l~~~g~~vel~~~~g~~H~~~~l~~p~~~~~~~~~~~i~~Fl~~~ 422 (454)
--|.++++..+|+.+++++++.+++++. ..++....+||. ..+-..+...+....+.+|+.+-
T Consensus 117 --pfps~vvaSrnDp~~~~~~a~~~a~~wg-----s~lv~~g~~GHi---N~~sG~g~wpeg~~~l~~~~s~~ 179 (181)
T COG3545 117 --PFPSVVVASRNDPYVSYEHAEDLANAWG-----SALVDVGEGGHI---NAESGFGPWPEGYALLAQLLSRA 179 (181)
T ss_pred --CCceeEEEecCCCCCCHHHHHHHHHhcc-----Hhheeccccccc---chhhcCCCcHHHHHHHHHHhhhh
Confidence 1289999999999999999999999885 578888889996 22334556778888888877653
No 147
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=98.12 E-value=4e-05 Score=74.29 Aligned_cols=190 Identities=16% Similarity=0.139 Sum_probs=102.1
Q ss_pred CeeEEEEeeCC--CCCCCcEEEEEcCCCccCCcccchhHHHHHHHhC----CcEEEEEecCCCC-----CCChhHHHHH-
Q 012898 188 RNRLDLYFPKS--SDGPKPVVAFITGGAWIIGYKAWGSLLGQQLSER----DIIVACIDYRNFP-----QGTIKDMVKD- 255 (454)
Q Consensus 188 ~~~l~vy~P~~--~~~~~Pvvv~~HGgg~~~g~~~~~~~~~~~la~~----G~~Vv~~dyr~~~-----~~~~~~~~~D- 255 (454)
..++-+|+|.+ ...++|+++++||--|.... ......+.|... ..++|.+||-..- .....+..+.
T Consensus 81 ~~~~vv~lppgy~~~~k~pvl~~~DG~~~~~~g--~i~~~~dsli~~g~i~pai~vgid~~d~~~R~~~~~~n~~~~~~L 158 (299)
T COG2382 81 ERRRVVYLPPGYNPLEKYPVLYLQDGQDWFRSG--RIPRILDSLIAAGEIPPAILVGIDYIDVKKRREELHCNEAYWRFL 158 (299)
T ss_pred ceeEEEEeCCCCCccccccEEEEeccHHHHhcC--ChHHHHHHHHHcCCCCCceEEecCCCCHHHHHHHhcccHHHHHHH
Confidence 34677888875 45578999999995443211 111233344333 5888888885311 1111111222
Q ss_pred HHHHHHHHHHhhhhcCCCCCcEEEEEcCchHHHHHHHHHHHHHhhhCCCCCcccchhhhhhhccccCCCCCCh-hhhhcC
Q 012898 256 ASQGISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLLEQAIKETGEGESTTWSVSQIRAYFGLSGGIMDGE-ESLRQY 334 (454)
Q Consensus 256 ~~~al~~l~~~~~~~g~d~~rI~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~~i~~~~~~~g~~~~~~-~~~~~~ 334 (454)
+...+=+|++..... -+.++-+|+|.|+||.++++++++++.. +......++...... ....+.
T Consensus 159 ~~eLlP~v~~~yp~~-~~a~~r~L~G~SlGG~vsL~agl~~Pe~--------------FG~V~s~Sps~~~~~~~~~~~~ 223 (299)
T COG2382 159 AQELLPYVEERYPTS-ADADGRVLAGDSLGGLVSLYAGLRHPER--------------FGHVLSQSGSFWWTPLDTQPQG 223 (299)
T ss_pred HHHhhhhhhccCccc-ccCCCcEEeccccccHHHHHHHhcCchh--------------hceeeccCCccccCcccccccc
Confidence 223444555554322 3556789999999999999999986433 333333333211110 000000
Q ss_pred CcccccCCCccccccCCCCCEEEEEeCCCCCCChHHHHHHHHHHHHcCCCEEEEEeCCCCccccc
Q 012898 335 SPEVLVQDPNTRHAVSLLPPIILFHGTADYSIPADASKNFANTLQRVGVRAESILYEGKTHTDLF 399 (454)
Q Consensus 335 ~p~~~~~~~~~~~~~~~~pPvLiihGe~D~~Vp~~~s~~l~~~l~~~g~~vel~~~~g~~H~~~~ 399 (454)
.... .............-++..-|+.+.+ ....+++++.|++.|.++.+..|+| ||.+..
T Consensus 224 ~~~~--~l~~~~a~~~~~~~~l~~g~~~~~~--~~pNr~L~~~L~~~g~~~~yre~~G-gHdw~~ 283 (299)
T COG2382 224 EVAE--SLKILHAIGTDERIVLTTGGEEGDF--LRPNRALAAQLEKKGIPYYYREYPG-GHDWAW 283 (299)
T ss_pred chhh--hhhhhhccCccceEEeecCCccccc--cchhHHHHHHHHhcCCcceeeecCC-CCchhH
Confidence 0000 0000001111111122222333333 6789999999999999999999999 998554
No 148
>PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases. Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B.
Probab=98.10 E-value=6.3e-05 Score=70.63 Aligned_cols=200 Identities=15% Similarity=0.108 Sum_probs=99.3
Q ss_pred CCCeeEEEEe--eCCC-CCCCcEEEEEcCCCccCCcccchhHHHHHHHhCCcEEEEEecCCC-C-------CCChhHHHH
Q 012898 186 QPRNRLDLYF--PKSS-DGPKPVVAFITGGAWIIGYKAWGSLLGQQLSERDIIVACIDYRNF-P-------QGTIKDMVK 254 (454)
Q Consensus 186 ~~~~~l~vy~--P~~~-~~~~Pvvv~~HGgg~~~g~~~~~~~~~~~la~~G~~Vv~~dyr~~-~-------~~~~~~~~~ 254 (454)
+++..+.+|. |++. ..+.+.||.-.|-| .....+..++.+|+..||.|+-+|.-.+ | +..+..+..
T Consensus 10 ~~~~~I~vwet~P~~~~~~~~~tiliA~Gf~---rrmdh~agLA~YL~~NGFhViRyDsl~HvGlSsG~I~eftms~g~~ 86 (294)
T PF02273_consen 10 EDGRQIRVWETRPKNNEPKRNNTILIAPGFA---RRMDHFAGLAEYLSANGFHVIRYDSLNHVGLSSGDINEFTMSIGKA 86 (294)
T ss_dssp TTTEEEEEEEE---TTS---S-EEEEE-TT----GGGGGGHHHHHHHHTTT--EEEE---B-------------HHHHHH
T ss_pred CCCCEEEEeccCCCCCCcccCCeEEEecchh---HHHHHHHHHHHHHhhCCeEEEeccccccccCCCCChhhcchHHhHH
Confidence 4556677776 4432 34458999998843 4556778899999999999999986542 1 223456788
Q ss_pred HHHHHHHHHHHhhhhcCCCCCcEEEEEcCchHHHHHHHHHHHHHhhhCCCCCcccchhhhhhh----------------c
Q 012898 255 DASQGISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLLEQAIKETGEGESTTWSVSQIRAY----------------F 318 (454)
Q Consensus 255 D~~~al~~l~~~~~~~g~d~~rI~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~~i~~~----------------~ 318 (454)
|...+++|+.+. | .++++|+.-|.-|-+|...+.+-............---..+... .
T Consensus 87 sL~~V~dwl~~~----g--~~~~GLIAaSLSaRIAy~Va~~i~lsfLitaVGVVnlr~TLe~al~~Dyl~~~i~~lp~dl 160 (294)
T PF02273_consen 87 SLLTVIDWLATR----G--IRRIGLIAASLSARIAYEVAADINLSFLITAVGVVNLRDTLEKALGYDYLQLPIEQLPEDL 160 (294)
T ss_dssp HHHHHHHHHHHT----T-----EEEEEETTHHHHHHHHTTTS--SEEEEES--S-HHHHHHHHHSS-GGGS-GGG--SEE
T ss_pred HHHHHHHHHHhc----C--CCcchhhhhhhhHHHHHHHhhccCcceEEEEeeeeeHHHHHHHHhccchhhcchhhCCCcc
Confidence 999999999854 3 35899999999999998877642100000000000000000000 0
Q ss_pred cccCCCCCChhhhhcCCccccc-CCCccccccCCCCCEEEEEeCCCCCCChHHHHHHHHHHHHcCCCEEEEEeCCCCcc
Q 012898 319 GLSGGIMDGEESLRQYSPEVLV-QDPNTRHAVSLLPPIILFHGTADYSIPADASKNFANTLQRVGVRAESILYEGKTHT 396 (454)
Q Consensus 319 ~~~g~~~~~~~~~~~~~p~~~~-~~~~~~~~~~~~pPvLiihGe~D~~Vp~~~s~~l~~~l~~~g~~vel~~~~g~~H~ 396 (454)
.+.|.....+..+...-...+. -.....+......|++.+++++|..|-.....++.+.+.. ..++++..+|..|.
T Consensus 161 dfeGh~l~~~vFv~dc~e~~w~~l~ST~~~~k~l~iP~iaF~A~~D~WV~q~eV~~~~~~~~s--~~~klysl~Gs~Hd 237 (294)
T PF02273_consen 161 DFEGHNLGAEVFVTDCFEHGWDDLDSTINDMKRLSIPFIAFTANDDDWVKQSEVEELLDNINS--NKCKLYSLPGSSHD 237 (294)
T ss_dssp EETTEEEEHHHHHHHHHHTT-SSHHHHHHHHTT--S-EEEEEETT-TTS-HHHHHHHHTT-TT----EEEEEETT-SS-
T ss_pred cccccccchHHHHHHHHHcCCccchhHHHHHhhCCCCEEEEEeCCCccccHHHHHHHHHhcCC--CceeEEEecCccch
Confidence 0001000000000000000000 0011223444567999999999999887777777776653 36899999999997
No 149
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=98.08 E-value=1e-05 Score=81.11 Aligned_cols=94 Identities=24% Similarity=0.384 Sum_probs=54.9
Q ss_pred CCCCcEEEEEcCCCccCCc--ccchhHHHHHHH-h--CCcEEEEEecCCCCCCChhHHHHHH---HHHHHH-HHHhhhhc
Q 012898 200 DGPKPVVAFITGGAWIIGY--KAWGSLLGQQLS-E--RDIIVACIDYRNFPQGTIKDMVKDA---SQGISF-VCNNISEY 270 (454)
Q Consensus 200 ~~~~Pvvv~~HGgg~~~g~--~~~~~~~~~~la-~--~G~~Vv~~dyr~~~~~~~~~~~~D~---~~al~~-l~~~~~~~ 270 (454)
+..+|++|++|| |.... ..+...+.+.+. + .++.|+++|+.............+. ...+.. |.......
T Consensus 68 n~~~pt~iiiHG--w~~~~~~~~~~~~~~~all~~~~~d~NVI~VDWs~~a~~~Y~~a~~n~~~vg~~la~~l~~L~~~~ 145 (331)
T PF00151_consen 68 NPSKPTVIIIHG--WTGSGSSESWIQDMIKALLQKDTGDYNVIVVDWSRGASNNYPQAVANTRLVGRQLAKFLSFLINNF 145 (331)
T ss_dssp -TTSEEEEEE----TT-TT-TTTHHHHHHHHHHCC--S-EEEEEEE-HHHHSS-HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCeEEEEcC--cCCcccchhHHHHHHHHHHhhccCCceEEEEcchhhccccccchhhhHHHHHHHHHHHHHHHHhhc
Confidence 457899999999 44333 345555666554 4 4899999999865444444433332 222222 22222356
Q ss_pred CCCCCcEEEEEcCchHHHHHHHHHH
Q 012898 271 GGDPDRIYLMGQSAGAHIAACTLLE 295 (454)
Q Consensus 271 g~d~~rI~l~G~S~GG~la~~~a~~ 295 (454)
|+++++|.|+|||+|||+|..++..
T Consensus 146 g~~~~~ihlIGhSLGAHvaG~aG~~ 170 (331)
T PF00151_consen 146 GVPPENIHLIGHSLGAHVAGFAGKY 170 (331)
T ss_dssp ---GGGEEEEEETCHHHHHHHHHHH
T ss_pred CCChhHEEEEeeccchhhhhhhhhh
Confidence 8899999999999999999988765
No 150
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=98.07 E-value=0.00017 Score=68.98 Aligned_cols=121 Identities=17% Similarity=0.215 Sum_probs=72.7
Q ss_pred hcCCCCCcEEEEEcCchHHHHHHHHHHHHHhhhCCCCCcccchhhhhhhccccCCCCCChhh-hhcCCcccccCCCcccc
Q 012898 269 EYGGDPDRIYLMGQSAGAHIAACTLLEQAIKETGEGESTTWSVSQIRAYFGLSGGIMDGEES-LRQYSPEVLVQDPNTRH 347 (454)
Q Consensus 269 ~~g~d~~rI~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~-~~~~~p~~~~~~~~~~~ 347 (454)
.+.+|.+|.+|+|||+||.+++.+++.+ +..+..++..++..+..... +........
T Consensus 131 ~y~~~~~~~~i~GhSlGGLfvl~aLL~~--------------p~~F~~y~~~SPSlWw~n~~~l~~~~~~~~-------- 188 (264)
T COG2819 131 RYRTNSERTAIIGHSLGGLFVLFALLTY--------------PDCFGRYGLISPSLWWHNEAILREIESLKL-------- 188 (264)
T ss_pred ccccCcccceeeeecchhHHHHHHHhcC--------------cchhceeeeecchhhhCCHHHhcccccccc--------
Confidence 3678999999999999999999998874 34455555555533222222 222111100
Q ss_pred ccCCCCCEEEEEe--CCCC---CC---ChHHHHHHHHHHHH-cCCCEEEEEeCCCCccccccCCCCCCcHHHHHHHHHHH
Q 012898 348 AVSLLPPIILFHG--TADY---SI---PADASKNFANTLQR-VGVRAESILYEGKTHTDLFLQDPMRGGKDDMFEDIVAI 418 (454)
Q Consensus 348 ~~~~~pPvLiihG--e~D~---~V---p~~~s~~l~~~l~~-~g~~vel~~~~g~~H~~~~l~~p~~~~~~~~~~~i~~F 418 (454)
. . ..++.|.-| +.|. .. ...++.+..+.+++ .|..+.+..+++.+|+..+ ...+...+.|
T Consensus 189 ~-~-~~~i~l~iG~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~f~~~~~~~H~~~~---------~~~~~~al~~ 257 (264)
T COG2819 189 L-K-TKRICLYIGSGELDSSRSIRMAENKQEAAELSSLLEKRTGARLVFQEEPLEHHGSVI---------HASLPSALRF 257 (264)
T ss_pred C-C-CcceEEEecccccCcchhhhhhhHHHHHHHHHHHHhhccCCceEecccccccccchH---------HHHHHHHHHh
Confidence 0 1 224444444 4443 11 23455566666666 7889999999999998443 3455666666
Q ss_pred HHhc
Q 012898 419 IHAD 422 (454)
Q Consensus 419 l~~~ 422 (454)
+...
T Consensus 258 l~~~ 261 (264)
T COG2819 258 LDCK 261 (264)
T ss_pred hhcc
Confidence 6543
No 151
>KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=98.01 E-value=5.5e-05 Score=78.75 Aligned_cols=168 Identities=14% Similarity=0.118 Sum_probs=96.7
Q ss_pred CCcEEEEEcCCCccCCcccchhHHHHHHHhCC--cEEEEEecCCCCC-CChhHHHHHHHHHHHHHHHhhhhcCCCCCcEE
Q 012898 202 PKPVVAFITGGAWIIGYKAWGSLLGQQLSERD--IIVACIDYRNFPQ-GTIKDMVKDASQGISFVCNNISEYGGDPDRIY 278 (454)
Q Consensus 202 ~~Pvvv~~HGgg~~~g~~~~~~~~~~~la~~G--~~Vv~~dyr~~~~-~~~~~~~~D~~~al~~l~~~~~~~g~d~~rI~ 278 (454)
..|++++.||++-..-..+++..|-+.|...| .-|.++|++..-. ...-...+-...+.+++...+.. ......|.
T Consensus 175 ~spl~i~aps~p~ap~tSd~~~~wqs~lsl~gevvev~tfdl~n~igG~nI~h~ae~~vSf~r~kvlei~g-efpha~Ii 253 (784)
T KOG3253|consen 175 ASPLAIKAPSTPLAPKTSDRMWSWQSRLSLKGEVVEVPTFDLNNPIGGANIKHAAEYSVSFDRYKVLEITG-EFPHAPII 253 (784)
T ss_pred CCceEEeccCCCCCCccchHHHhHHHHHhhhceeeeeccccccCCCCCcchHHHHHHHHHHhhhhhhhhhc-cCCCCceE
Confidence 35899999998722223344455556655554 5566777775332 22222233333344433333321 12345899
Q ss_pred EEEcCchHHHHHHHHHHHHHhhhCCCCCcccchhhhhhhccccCCCCCChhhhhcCCcccccCCCccccccCCCCCEEEE
Q 012898 279 LMGQSAGAHIAACTLLEQAIKETGEGESTTWSVSQIRAYFGLSGGIMDGEESLRQYSPEVLVQDPNTRHAVSLLPPIILF 358 (454)
Q Consensus 279 l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~pPvLii 358 (454)
|+|.|||+.++.+......+. .+.+.+.+.- .+ ....... ....+..+....|+|++
T Consensus 254 LvGrsmGAlVachVSpsnsdv-------------~V~~vVCigy-pl------~~vdgpr---girDE~Lldmk~PVLFV 310 (784)
T KOG3253|consen 254 LVGRSMGALVACHVSPSNSDV-------------EVDAVVCIGY-PL------DTVDGPR---GIRDEALLDMKQPVLFV 310 (784)
T ss_pred EEecccCceeeEEeccccCCc-------------eEEEEEEecc-cc------cCCCccc---CCcchhhHhcCCceEEE
Confidence 999999966665444322111 1222221111 00 0000000 11122344455699999
Q ss_pred EeCCCCCCChHHHHHHHHHHHHcCCCEEEEEeCCCCcc
Q 012898 359 HGTADYSIPADASKNFANTLQRVGVRAESILYEGKTHT 396 (454)
Q Consensus 359 hGe~D~~Vp~~~s~~l~~~l~~~g~~vel~~~~g~~H~ 396 (454)
.|.+|..++.+.-+++.+++++ .++++++.+++|.
T Consensus 311 ~Gsnd~mcspn~ME~vreKMqA---~~elhVI~~adhs 345 (784)
T KOG3253|consen 311 IGSNDHMCSPNSMEEVREKMQA---EVELHVIGGADHS 345 (784)
T ss_pred ecCCcccCCHHHHHHHHHHhhc---cceEEEecCCCcc
Confidence 9999999999999999999987 7899999999998
No 152
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=97.93 E-value=0.00036 Score=70.64 Aligned_cols=139 Identities=16% Similarity=0.145 Sum_probs=79.4
Q ss_pred HHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCchHHHHHHHHHHHHHhhhCCCCCcccchhhhhhhccccCC------CCC
Q 012898 253 VKDASQGISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLLEQAIKETGEGESTTWSVSQIRAYFGLSGG------IMD 326 (454)
Q Consensus 253 ~~D~~~al~~l~~~~~~~g~d~~rI~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~~i~~~~~~~g~------~~~ 326 (454)
..|...|+.++.+++..++. .-++.++|+|.||++|...+.-.+....+...-..|..+.+.-.++..-. ..+
T Consensus 163 AiD~INAl~~l~k~~~~~~~-~lp~I~~G~s~G~yla~l~~k~aP~~~~~~iDns~~~~p~l~~I~Gre~~~~~y~~~~~ 241 (403)
T PF11144_consen 163 AIDIINALLDLKKIFPKNGG-GLPKIYIGSSHGGYLAHLCAKIAPWLFDGVIDNSSYALPPLRYIFGREIDFMKYICSGE 241 (403)
T ss_pred HHHHHHHHHHHHHhhhcccC-CCcEEEEecCcHHHHHHHHHhhCccceeEEEecCccccchhheeeeeecCccccccccc
Confidence 34777788888887665543 34899999999999999888665443332222222222222222211100 000
Q ss_pred C------------hhhh--hcCCcccccCCC-ccc-----------cccCCCCCEEEEEeCCCCCCChHHHHHHHHHHHH
Q 012898 327 G------------EESL--RQYSPEVLVQDP-NTR-----------HAVSLLPPIILFHGTADYSIPADASKNFANTLQR 380 (454)
Q Consensus 327 ~------------~~~~--~~~~p~~~~~~~-~~~-----------~~~~~~pPvLiihGe~D~~Vp~~~s~~l~~~l~~ 380 (454)
. ...| ...+|..+.... .++ ......+-.+..|+..|..+|.++-+++++.+++
T Consensus 242 ~~~~~~~~i~~~~Kt~Wt~n~~S~~~Fs~~~~~IR~iLn~~HL~iqs~~n~~~~yvsYHs~~D~~~p~~~K~~l~~~l~~ 321 (403)
T PF11144_consen 242 FFNFKNIRIYCFDKTFWTRNKNSPYYFSKARYIIRSILNPDHLKIQSNYNKKIIYVSYHSIKDDLAPAEDKEELYEILKN 321 (403)
T ss_pred ccccCCEEEEEEeccccccCCCCccccChHHHHHHHhcChHHHHHHHhcccceEEEEEeccCCCCCCHHHHHHHHHHHHH
Confidence 0 0001 111111111000 001 1111234567899999999999999999999999
Q ss_pred cCCCEEEEEeCC
Q 012898 381 VGVRAESILYEG 392 (454)
Q Consensus 381 ~g~~vel~~~~g 392 (454)
.|-+++++.+.+
T Consensus 322 lgfda~l~lIkd 333 (403)
T PF11144_consen 322 LGFDATLHLIKD 333 (403)
T ss_pred cCCCeEEEEecC
Confidence 999999998833
No 153
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=97.92 E-value=4e-05 Score=70.98 Aligned_cols=137 Identities=22% Similarity=0.233 Sum_probs=83.8
Q ss_pred HHHHHHHHHHhhhhcCCCCCcEEEEEcCchHHHHHHHHHHHHHhhhCCCCCcccchhhhhhhccccCCCCCChhhhhcCC
Q 012898 256 ASQGISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLLEQAIKETGEGESTTWSVSQIRAYFGLSGGIMDGEESLRQYS 335 (454)
Q Consensus 256 ~~~al~~l~~~~~~~g~d~~rI~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~~~~~ 335 (454)
....+++|.+.+.+.| .- =+|+|+|.|+.++..++....... .....+.++=.+.++|....... ...
T Consensus 88 ~eesl~yl~~~i~enG-PF--DGllGFSQGA~laa~l~~~~~~~~------~~~~~P~~kF~v~~SGf~~~~~~-~~~-- 155 (230)
T KOG2551|consen 88 FEESLEYLEDYIKENG-PF--DGLLGFSQGAALAALLAGLGQKGL------PYVKQPPFKFAVFISGFKFPSKK-LDE-- 155 (230)
T ss_pred hHHHHHHHHHHHHHhC-CC--ccccccchhHHHHHHhhcccccCC------cccCCCCeEEEEEEecCCCCcch-hhh--
Confidence 3456677777666544 21 279999999999998876211110 01112334444555552221100 000
Q ss_pred cccccCCCccccccCCCCCEEEEEeCCCCCCChHHHHHHHHHHHHcCCCEEEEEeCCCCccccccCCCCCCcHHHHHHHH
Q 012898 336 PEVLVQDPNTRHAVSLLPPIILFHGTADYSIPADASKNFANTLQRVGVRAESILYEGKTHTDLFLQDPMRGGKDDMFEDI 415 (454)
Q Consensus 336 p~~~~~~~~~~~~~~~~pPvLiihGe~D~~Vp~~~s~~l~~~l~~~g~~vel~~~~g~~H~~~~l~~p~~~~~~~~~~~i 415 (454)
.........|.|-+.|+.|.+||...++.|++.+++ ..++..+| ||. + | ....+.+.+
T Consensus 156 ---------~~~~~~i~~PSLHi~G~~D~iv~~~~s~~L~~~~~~----a~vl~Hpg-gH~-V----P---~~~~~~~~i 213 (230)
T KOG2551|consen 156 ---------SAYKRPLSTPSLHIFGETDTIVPSERSEQLAESFKD----ATVLEHPG-GHI-V----P---NKAKYKEKI 213 (230)
T ss_pred ---------hhhccCCCCCeeEEecccceeecchHHHHHHHhcCC----CeEEecCC-Ccc-C----C---CchHHHHHH
Confidence 011223456999999999999999999999999985 35555554 896 2 2 345788888
Q ss_pred HHHHHhcChhh
Q 012898 416 VAIIHADDQEA 426 (454)
Q Consensus 416 ~~Fl~~~~~~~ 426 (454)
.+||..-.+..
T Consensus 214 ~~fi~~~~~~~ 224 (230)
T KOG2551|consen 214 ADFIQSFLQEE 224 (230)
T ss_pred HHHHHHHHHhh
Confidence 88888765443
No 154
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=97.91 E-value=8.9e-05 Score=73.06 Aligned_cols=95 Identities=21% Similarity=0.279 Sum_probs=69.5
Q ss_pred CCCcEEEEEcCCCccCCccc---chhHHHHHHHhC-CcEEEEEecCCCCCCCh----hHHHHHHHHHHHHHHHhhhhcCC
Q 012898 201 GPKPVVAFITGGAWIIGYKA---WGSLLGQQLSER-DIIVACIDYRNFPQGTI----KDMVKDASQGISFVCNNISEYGG 272 (454)
Q Consensus 201 ~~~Pvvv~~HGgg~~~g~~~---~~~~~~~~la~~-G~~Vv~~dyr~~~~~~~----~~~~~D~~~al~~l~~~~~~~g~ 272 (454)
++...||+.-|.|....... ........+++. |..|+.+||||.+.+.. .+.+.|..+.++|++++. .|.
T Consensus 135 ~~~RWiL~s~GNg~~~E~~~~~~~~~~~~~~~ak~~~aNvl~fNYpGVg~S~G~~s~~dLv~~~~a~v~yL~d~~--~G~ 212 (365)
T PF05677_consen 135 KPQRWILVSNGNGECYENRAMLDYKDDWIQRFAKELGANVLVFNYPGVGSSTGPPSRKDLVKDYQACVRYLRDEE--QGP 212 (365)
T ss_pred CCCcEEEEEcCChHHhhhhhhhccccHHHHHHHHHcCCcEEEECCCccccCCCCCCHHHHHHHHHHHHHHHHhcc--cCC
Confidence 45568999999775443321 112344566655 99999999999776643 456778888999998764 367
Q ss_pred CCCcEEEEEcCchHHHHHHHHHHHH
Q 012898 273 DPDRIYLMGQSAGAHIAACTLLEQA 297 (454)
Q Consensus 273 d~~rI~l~G~S~GG~la~~~a~~~~ 297 (454)
.+++|.+.|||.||.+++.++.++.
T Consensus 213 ka~~Ii~yG~SLGG~Vqa~AL~~~~ 237 (365)
T PF05677_consen 213 KAKNIILYGHSLGGGVQAEALKKEV 237 (365)
T ss_pred ChheEEEeeccccHHHHHHHHHhcc
Confidence 8899999999999999998665543
No 155
>PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella. Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily.
Probab=97.91 E-value=0.00052 Score=69.45 Aligned_cols=221 Identities=19% Similarity=0.214 Sum_probs=134.3
Q ss_pred eeEEEEeeCCCCCCCcEEEEEcCCC---ccCCcccchhHHHHHHHhC-CcEEEEEe-cCC----CCCC------------
Q 012898 189 NRLDLYFPKSSDGPKPVVAFITGGA---WIIGYKAWGSLLGQQLSER-DIIVACID-YRN----FPQG------------ 247 (454)
Q Consensus 189 ~~l~vy~P~~~~~~~Pvvv~~HGgg---~~~g~~~~~~~~~~~la~~-G~~Vv~~d-yr~----~~~~------------ 247 (454)
..+.|++|++.......++++.||. +..............+|.. |.+|+.+. -+. +...
T Consensus 50 H~l~I~vP~~~~~~~~all~i~gG~~~~~~~~~~~~~~~~~~~~A~~t~siv~~l~qvPNQpl~f~~d~~~r~ED~iIAy 129 (367)
T PF10142_consen 50 HWLTIYVPKNDKNPDTALLFITGGSNRNWPGPPPDFDDELLQMIARATGSIVAILYQVPNQPLTFDNDPKPRTEDAIIAY 129 (367)
T ss_pred EEEEEEECCCCCCCceEEEEEECCcccCCCCCCCcchHHHHHHHHHhcCCEEEEeCcCCCCCeEeCCCCccccHHHHHHH
Confidence 4789999998555667999999986 2222333445567778877 77777653 111 1110
Q ss_pred -----------Chh---HHHHHHHHHHHHHHHhhhh-cCCCCCcEEEEEcCchHHHHHHHHHHHHHhhhCCC---CCccc
Q 012898 248 -----------TIK---DMVKDASQGISFVCNNISE-YGGDPDRIYLMGQSAGAHIAACTLLEQAIKETGEG---ESTTW 309 (454)
Q Consensus 248 -----------~~~---~~~~D~~~al~~l~~~~~~-~g~d~~rI~l~G~S~GG~la~~~a~~~~~~~~~~~---~~~~~ 309 (454)
.++ .+..-+..|++.+++...+ .|.+.++.+|.|.|==|..++..++. ..+..+.. ....-
T Consensus 130 tW~~fl~~~d~~w~l~~PMtka~vrAMD~vq~~~~~~~~~~i~~FvV~GaSKRGWTtWltaa~-D~RV~aivP~Vid~LN 208 (367)
T PF10142_consen 130 TWRKFLETGDPEWPLHLPMTKAAVRAMDAVQEFLKKKFGVNIEKFVVTGASKRGWTTWLTAAV-DPRVKAIVPIVIDVLN 208 (367)
T ss_pred HHHHHhccCCccchhhhhHHHHHHHHHHHHHHHHHhhcCCCccEEEEeCCchHhHHHHHhhcc-CcceeEEeeEEEccCC
Confidence 011 1344566777777777654 47788899999999999999998873 22211111 11111
Q ss_pred chhhhhhhccccC-CCCCC-hh-----hhhcCC-ccc---ccCCCccccccCCCCCEEEEEeCCCCCCChHHHHHHHHHH
Q 012898 310 SVSQIRAYFGLSG-GIMDG-EE-----SLRQYS-PEV---LVQDPNTRHAVSLLPPIILFHGTADYSIPADASKNFANTL 378 (454)
Q Consensus 310 ~~~~i~~~~~~~g-~~~~~-~~-----~~~~~~-p~~---~~~~~~~~~~~~~~pPvLiihGe~D~~Vp~~~s~~l~~~l 378 (454)
....+...+..+| ..-.. .. ....+. +.. ....+++....+...|-+++.|..|+...++.+.-+++.|
T Consensus 209 ~~~~l~h~y~~yG~~ws~a~~dY~~~gi~~~l~tp~f~~L~~ivDP~~Y~~rL~~PK~ii~atgDeFf~pD~~~~y~d~L 288 (367)
T PF10142_consen 209 MKANLEHQYRSYGGNWSFAFQDYYNEGITQQLDTPEFDKLMQIVDPYSYRDRLTMPKYIINATGDEFFVPDSSNFYYDKL 288 (367)
T ss_pred cHHHHHHHHHHhCCCCccchhhhhHhCchhhcCCHHHHHHHHhcCHHHHHHhcCccEEEEecCCCceeccCchHHHHhhC
Confidence 2233333343334 20000 00 000010 000 0011112233344569999999999999999999999998
Q ss_pred HHcCCCEEEEEeCCCCccccccCCCCCCcHHHHHHHHHHHHHhc
Q 012898 379 QRVGVRAESILYEGKTHTDLFLQDPMRGGKDDMFEDIVAIIHAD 422 (454)
Q Consensus 379 ~~~g~~vel~~~~g~~H~~~~l~~p~~~~~~~~~~~i~~Fl~~~ 422 (454)
+. +..++.+|+.+|... . .+.++.+..|+..-
T Consensus 289 ~G---~K~lr~vPN~~H~~~-------~--~~~~~~l~~f~~~~ 320 (367)
T PF10142_consen 289 PG---EKYLRYVPNAGHSLI-------G--SDVVQSLRAFYNRI 320 (367)
T ss_pred CC---CeeEEeCCCCCcccc-------h--HHHHHHHHHHHHHH
Confidence 84 789999999999822 1 57888899998864
No 156
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=97.88 E-value=0.00097 Score=66.42 Aligned_cols=204 Identities=15% Similarity=0.147 Sum_probs=117.0
Q ss_pred CCCCeeEEEEeeCCCCCCCcEEEEEcCCCccCCcccchhHHHHHHHhCCcEEEEEecCCCCC------------------
Q 012898 185 DQPRNRLDLYFPKSSDGPKPVVAFITGGAWIIGYKAWGSLLGQQLSERDIIVACIDYRNFPQ------------------ 246 (454)
Q Consensus 185 ~~~~~~l~vy~P~~~~~~~Pvvv~~HGgg~~~g~~~~~~~~~~~la~~G~~Vv~~dyr~~~~------------------ 246 (454)
.++...+-+|.|....+.+-+||++||-|...........+.+.|.+.|+.++++....-..
T Consensus 69 ~~~~~flaL~~~~~~~~~~G~vIilp~~g~~~d~p~~i~~LR~~L~~~GW~Tlsit~P~~~~~~~p~~~~~~~~~~~a~~ 148 (310)
T PF12048_consen 69 AGEERFLALWRPANSAKPQGAVIILPDWGEHPDWPGLIAPLRRELPDHGWATLSITLPDPAPPASPNRATEAEEVPSAGD 148 (310)
T ss_pred cCCEEEEEEEecccCCCCceEEEEecCCCCCCCcHhHHHHHHHHhhhcCceEEEecCCCcccccCCccCCCCCCCCCCCC
Confidence 35556788999998777788999999966544444556678899999999999987665100
Q ss_pred CCh------------------hHHHHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCchHHHHHHHHHHHHHhhhCCCCCcc
Q 012898 247 GTI------------------KDMVKDASQGISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLLEQAIKETGEGESTT 308 (454)
Q Consensus 247 ~~~------------------~~~~~D~~~al~~l~~~~~~~g~d~~rI~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~ 308 (454)
... ......+.+-++-+.+....+++ .+|+|+||+.|++.++.++....
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ari~Aa~~~~~~~~~--~~ivlIg~G~gA~~~~~~la~~~----------- 215 (310)
T PF12048_consen 149 QQLSQPSDEPSPASAQEAEAREAYEERLFARIEAAIAFAQQQGG--KNIVLIGHGTGAGWAARYLAEKP----------- 215 (310)
T ss_pred CCcCCCCCCCccccccHhHHhHHHHHHHHHHHHHHHHHHHhcCC--ceEEEEEeChhHHHHHHHHhcCC-----------
Confidence 000 00111222233333333344443 36999999999999999987642
Q ss_pred cchhhhhhhccccCCCCCChhhhhcCCcccccCCCccccccCCCCCEEEEEeCCCCCCChHHHHHHHHHHHH-cCCCEEE
Q 012898 309 WSVSQIRAYFGLSGGIMDGEESLRQYSPEVLVQDPNTRHAVSLLPPIILFHGTADYSIPADASKNFANTLQR-VGVRAES 387 (454)
Q Consensus 309 ~~~~~i~~~~~~~g~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~pPvLiihGe~D~~Vp~~~s~~l~~~l~~-~g~~vel 387 (454)
...+.+++.+......... .............|+|=+++..... ....+..-....+. ....++-
T Consensus 216 --~~~~daLV~I~a~~p~~~~-----------n~~l~~~la~l~iPvLDi~~~~~~~-~~~~a~~R~~~a~r~~~~~YrQ 281 (310)
T PF12048_consen 216 --PPMPDALVLINAYWPQPDR-----------NPALAEQLAQLKIPVLDIYSADNPA-SQQTAKQRKQAAKRNKKPDYRQ 281 (310)
T ss_pred --CcccCeEEEEeCCCCcchh-----------hhhHHHHhhccCCCEEEEecCCChH-HHHHHHHHHHHHHhccCCCcee
Confidence 2234455554442111100 0000011222345999888877322 12222222222222 2345777
Q ss_pred EEeCCCCccccccCCCCCCcHHHHHHHHHHHHHhc
Q 012898 388 ILYEGKTHTDLFLQDPMRGGKDDMFEDIVAIIHAD 422 (454)
Q Consensus 388 ~~~~g~~H~~~~l~~p~~~~~~~~~~~i~~Fl~~~ 422 (454)
+.+.+..|.. ....+.++++|..|++++
T Consensus 282 ~~L~~~~~~~-------~~~~~~l~~rIrGWL~~~ 309 (310)
T PF12048_consen 282 IQLPGLPDNP-------SGWQEQLLRRIRGWLKRH 309 (310)
T ss_pred EecCCCCCCh-------hhHHHHHHHHHHHHHHhh
Confidence 7778777751 112234999999999876
No 157
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=97.83 E-value=0.00098 Score=63.03 Aligned_cols=192 Identities=17% Similarity=0.213 Sum_probs=111.8
Q ss_pred EEEEcCCCccCCcccchhHHHHHHHhCC-----cEEEEEecCCC----------------------CCCChhHHHHHHHH
Q 012898 206 VAFITGGAWIIGYKAWGSLLGQQLSERD-----IIVACIDYRNF----------------------PQGTIKDMVKDASQ 258 (454)
Q Consensus 206 vv~~HGgg~~~g~~~~~~~~~~~la~~G-----~~Vv~~dyr~~----------------------~~~~~~~~~~D~~~ 258 (454)
.||+||.| |+......+..+|...+ ..++.+|--+. ........-.....
T Consensus 48 TIfIhGsg---G~asS~~~Mv~ql~~~~~~~~e~Lt~~V~~dgslk~tGk~~Kd~~nP~I~~gfe~n~~s~~~~s~wlk~ 124 (288)
T COG4814 48 TIFIHGSG---GTASSLNGMVNQLLPDYKAGTESLTMTVDVDGSLKVTGKISKDAKNPIIEFGFEDNTASGLDQSKWLKK 124 (288)
T ss_pred eEEEecCC---CChhHHHHHHHHhhhcccccccceEEEEcCCCcEEEeeeecccCCCCeEEEEEecCcCchhhHHHHHHH
Confidence 58999954 66666666777777664 34444543331 01112223334556
Q ss_pred HHHHHHHhhhhcCCCCCcEEEEEcCchHHHHHHHHHHHHHhhhCCCCCcccchhhhhhhccccCCCC----CChhhhhcC
Q 012898 259 GISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLLEQAIKETGEGESTTWSVSQIRAYFGLSGGIM----DGEESLRQY 334 (454)
Q Consensus 259 al~~l~~~~~~~g~d~~rI~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~~i~~~~~~~g~~~----~~~~~~~~~ 334 (454)
++.+|+++ .+-.++-++||||||.....++....... ..+.+..++.+.|+.. ...+.+..+
T Consensus 125 ~msyL~~~-----Y~i~k~n~VGhSmGg~~~~~Y~~~yg~dk---------s~P~lnK~V~l~gpfN~~~l~~de~v~~v 190 (288)
T COG4814 125 AMSYLQKH-----YNIPKFNAVGHSMGGLGLTYYMIDYGDDK---------SLPPLNKLVSLAGPFNVGNLVPDETVTDV 190 (288)
T ss_pred HHHHHHHh-----cCCceeeeeeeccccHHHHHHHHHhcCCC---------CCcchhheEEecccccccccCCCcchhee
Confidence 67777765 34458999999999999999988764332 2345666666665422 111222111
Q ss_pred Cccc--ccCCCcc------ccccCCCCCEEEEEeCCC------CCCChHHHHHHHHHHHHcCCCEEEEEeCC--CCcccc
Q 012898 335 SPEV--LVQDPNT------RHAVSLLPPIILFHGTAD------YSIPADASKNFANTLQRVGVRAESILYEG--KTHTDL 398 (454)
Q Consensus 335 ~p~~--~~~~~~~------~~~~~~~pPvLiihGe~D------~~Vp~~~s~~l~~~l~~~g~~vel~~~~g--~~H~~~ 398 (454)
.-.. ....+.. ........-+|++.|+.| -.||...+...+.-+...+..++-.+|+| +.|.-+
T Consensus 191 ~~~~~~~~~t~y~~y~~~n~k~v~~~~evl~IaGDl~dg~~tDG~Vp~assls~~~lf~~~~ksy~e~~~~Gk~a~Hs~l 270 (288)
T COG4814 191 LKDGPGLIKTPYYDYIAKNYKKVSPNTEVLLIAGDLDDGKQTDGAVPWASSLSIYHLFKKNGKSYIESLYKGKDARHSKL 270 (288)
T ss_pred eccCccccCcHHHHHHHhcceeCCCCcEEEEEecccccCCcCCCceechHhHHHHHHhccCcceeEEEeeeCCcchhhcc
Confidence 1110 0111100 011111236999999876 47888899999888887776666656665 468622
Q ss_pred ccCCCCCCcHHHHHHHHHHHHHh
Q 012898 399 FLQDPMRGGKDDMFEDIVAIIHA 421 (454)
Q Consensus 399 ~l~~p~~~~~~~~~~~i~~Fl~~ 421 (454)
. +...+.+.+..||-+
T Consensus 271 h-------en~~v~~yv~~FLw~ 286 (288)
T COG4814 271 H-------ENPTVAKYVKNFLWE 286 (288)
T ss_pred C-------CChhHHHHHHHHhhc
Confidence 2 235777888888754
No 158
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=97.82 E-value=0.00013 Score=69.29 Aligned_cols=90 Identities=19% Similarity=0.234 Sum_probs=57.0
Q ss_pred CcEEEEEcCCCccCCcccchhHHHHHHHh--------CCcEEEEEecCCCCCCC----hhHHHHHHHHHHHHHHHhhhhc
Q 012898 203 KPVVAFITGGAWIIGYKAWGSLLGQQLSE--------RDIIVACIDYRNFPQGT----IKDMVKDASQGISFVCNNISEY 270 (454)
Q Consensus 203 ~Pvvv~~HGgg~~~g~~~~~~~~~~~la~--------~G~~Vv~~dyr~~~~~~----~~~~~~D~~~al~~l~~~~~~~ 270 (454)
...|||+||.+ |+......++..+.+ ..+.++++||....... +....+-+..+++.+.+....-
T Consensus 4 g~pVlFIhG~~---Gs~~q~rsl~~~~~~~~~~~~~~~~~d~ft~df~~~~s~~~g~~l~~q~~~~~~~i~~i~~~~~~~ 80 (225)
T PF07819_consen 4 GIPVLFIHGNA---GSYKQVRSLASELQRKALLNDNSSHFDFFTVDFNEELSAFHGRTLQRQAEFLAEAIKYILELYKSN 80 (225)
T ss_pred CCEEEEECcCC---CCHhHHHHHHHHHhhhhhhccCccceeEEEeccCccccccccccHHHHHHHHHHHHHHHHHhhhhc
Confidence 45799999953 555544445544421 25888888887532221 2233334555666666655333
Q ss_pred CCCCCcEEEEEcCchHHHHHHHHHH
Q 012898 271 GGDPDRIYLMGQSAGAHIAACTLLE 295 (454)
Q Consensus 271 g~d~~rI~l~G~S~GG~la~~~a~~ 295 (454)
...+++|.|+||||||.+|-.++..
T Consensus 81 ~~~~~~vilVgHSmGGlvar~~l~~ 105 (225)
T PF07819_consen 81 RPPPRSVILVGHSMGGLVARSALSL 105 (225)
T ss_pred cCCCCceEEEEEchhhHHHHHHHhc
Confidence 4577899999999999988777654
No 159
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=97.82 E-value=0.00035 Score=70.67 Aligned_cols=102 Identities=25% Similarity=0.281 Sum_probs=67.7
Q ss_pred eEEEEeeCCCC-CCCcEEEEEcCCCccC----CcccchhHHHHHHHhCCcEEEEEecCCCCC----CChhHHH-HHHHHH
Q 012898 190 RLDLYFPKSSD-GPKPVVAFITGGAWII----GYKAWGSLLGQQLSERDIIVACIDYRNFPQ----GTIKDMV-KDASQG 259 (454)
Q Consensus 190 ~l~vy~P~~~~-~~~Pvvv~~HGgg~~~----g~~~~~~~~~~~la~~G~~Vv~~dyr~~~~----~~~~~~~-~D~~~a 259 (454)
.+.-|.|.... .+.|+ +.+|- |+. -+-.....+..+|.+.|..|..++++.-.. ..+.+.+ +++..+
T Consensus 94 ~liqy~p~~e~v~~~Pl-LiVpP--~iNk~yi~Dl~~~~s~V~~l~~~g~~vfvIsw~nPd~~~~~~~~edYi~e~l~~a 170 (445)
T COG3243 94 ELIQYKPLTEKVLKRPL-LIVPP--WINKFYILDLSPEKSLVRWLLEQGLDVFVISWRNPDASLAAKNLEDYILEGLSEA 170 (445)
T ss_pred hhhccCCCCCccCCCce-Eeecc--ccCceeEEeCCCCccHHHHHHHcCCceEEEeccCchHhhhhccHHHHHHHHHHHH
Confidence 34556676543 34554 44554 211 111223458899999999999999986432 3445555 667788
Q ss_pred HHHHHHhhhhcCCCCCcEEEEEcCchHHHHHHHHHHHHHh
Q 012898 260 ISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLLEQAIK 299 (454)
Q Consensus 260 l~~l~~~~~~~g~d~~rI~l~G~S~GG~la~~~a~~~~~~ 299 (454)
++.+++.. ..++|-++|+|.||.+++.++...+.+
T Consensus 171 id~v~~it-----g~~~InliGyCvGGtl~~~ala~~~~k 205 (445)
T COG3243 171 IDTVKDIT-----GQKDINLIGYCVGGTLLAAALALMAAK 205 (445)
T ss_pred HHHHHHHh-----CccccceeeEecchHHHHHHHHhhhhc
Confidence 88887753 235899999999999999888776555
No 160
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=97.81 E-value=0.0013 Score=68.14 Aligned_cols=105 Identities=19% Similarity=0.227 Sum_probs=66.2
Q ss_pred EEEEeeCC---CCCCCcEEEEE----cCCCccCCcccchhHHHHHHHhCCcEEEEEecCCCCCCChhHHHHHHHHHHHHH
Q 012898 191 LDLYFPKS---SDGPKPVVAFI----TGGAWIIGYKAWGSLLGQQLSERDIIVACIDYRNFPQGTIKDMVKDASQGISFV 263 (454)
Q Consensus 191 l~vy~P~~---~~~~~Pvvv~~----HGgg~~~g~~~~~~~~~~~la~~G~~Vv~~dyr~~~~~~~~~~~~D~~~al~~l 263 (454)
+++.-|.+ ...++|+||.= ||-| +.|.+. ...++..|.. |.-|+.+.+.-.+. ....+.|+..+..-.
T Consensus 54 lrI~pp~~~~~d~~krP~vViDPRAGHGpG-IGGFK~-dSevG~AL~~-GHPvYFV~F~p~P~--pgQTl~DV~~ae~~F 128 (581)
T PF11339_consen 54 LRITPPEGVPVDPTKRPFVVIDPRAGHGPG-IGGFKP-DSEVGVALRA-GHPVYFVGFFPEPE--PGQTLEDVMRAEAAF 128 (581)
T ss_pred EEeECCCCCCCCCCCCCeEEeCCCCCCCCC-ccCCCc-ccHHHHHHHc-CCCeEEEEecCCCC--CCCcHHHHHHHHHHH
Confidence 55655553 24567888764 5543 344443 3445555544 88888877643332 223567777766544
Q ss_pred HHhhhhcCCCCCcEEEEEcCchHHHHHHHHHHHHHhh
Q 012898 264 CNNISEYGGDPDRIYLMGQSAGAHIAACTLLEQAIKE 300 (454)
Q Consensus 264 ~~~~~~~g~d~~rI~l~G~S~GG~la~~~a~~~~~~~ 300 (454)
.+.+.+..-+..+..|+|-++||+.++++++..++..
T Consensus 129 v~~V~~~hp~~~kp~liGnCQgGWa~~mlAA~~Pd~~ 165 (581)
T PF11339_consen 129 VEEVAERHPDAPKPNLIGNCQGGWAAMMLAALRPDLV 165 (581)
T ss_pred HHHHHHhCCCCCCceEEeccHHHHHHHHHHhcCcCcc
Confidence 4444444444459999999999999999998876553
No 161
>COG3150 Predicted esterase [General function prediction only]
Probab=97.76 E-value=0.00048 Score=61.12 Aligned_cols=184 Identities=16% Similarity=0.171 Sum_probs=93.4
Q ss_pred EEEEcCCCccCCcccchh--HHHHHHHhCCcEEEEEecCCCCCCChhHHHHHHHHHHHHHHHhhhhcCCCCCcEEEEEcC
Q 012898 206 VAFITGGAWIIGYKAWGS--LLGQQLSERDIIVACIDYRNFPQGTIKDMVKDASQGISFVCNNISEYGGDPDRIYLMGQS 283 (454)
Q Consensus 206 vv~~HGgg~~~g~~~~~~--~~~~~la~~G~~Vv~~dyr~~~~~~~~~~~~D~~~al~~l~~~~~~~g~d~~rI~l~G~S 283 (454)
|+|+|| |.. +..... .+.++++..+ -.+.|+.---. .|-..+++-+.+.+.+.+ |+ .+.|+|-|
T Consensus 2 ilYlHG--FnS-SP~shka~l~~q~~~~~~---~~i~y~~p~l~------h~p~~a~~ele~~i~~~~-~~-~p~ivGss 67 (191)
T COG3150 2 ILYLHG--FNS-SPGSHKAVLLLQFIDEDV---RDIEYSTPHLP------HDPQQALKELEKAVQELG-DE-SPLIVGSS 67 (191)
T ss_pred eEEEec--CCC-CcccHHHHHHHHHHhccc---cceeeecCCCC------CCHHHHHHHHHHHHHHcC-CC-CceEEeec
Confidence 899999 333 443332 2445555442 22233321111 123344555555555543 32 49999999
Q ss_pred chHHHHHHHHHHHHHhhhCCCCCcccchhhhhhhccccCCCCCChhhhhcCCcccccCCCccccccCCCCCEEEEE-eCC
Q 012898 284 AGAHIAACTLLEQAIKETGEGESTTWSVSQIRAYFGLSGGIMDGEESLRQYSPEVLVQDPNTRHAVSLLPPIILFH-GTA 362 (454)
Q Consensus 284 ~GG~la~~~a~~~~~~~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~pPvLiih-Ge~ 362 (454)
.||+.|-+++.+...+..... +...+...+.++++-........+..- .+......-...-.....|..+++. -+.
T Consensus 68 LGGY~At~l~~~~Girav~~N-Pav~P~e~l~gylg~~en~ytg~~y~l--e~~hI~~l~~~~~~~l~~p~~~~lL~qtg 144 (191)
T COG3150 68 LGGYYATWLGFLCGIRAVVFN-PAVRPYELLTGYLGRPENPYTGQEYVL--ESRHIATLCVLQFRELNRPRCLVLLSQTG 144 (191)
T ss_pred chHHHHHHHHHHhCChhhhcC-CCcCchhhhhhhcCCCCCCCCcceEEe--ehhhHHHHHHhhccccCCCcEEEeecccc
Confidence 999999999988665544331 122223344444443221111111100 0000000000000111223444444 455
Q ss_pred CCCCChHHHHHHHHHHHHcCCCEEEEEeCCCCccccccCCCCCCcHHHHHHHHHHHHHh
Q 012898 363 DYSIPADASKNFANTLQRVGVRAESILYEGKTHTDLFLQDPMRGGKDDMFEDIVAIIHA 421 (454)
Q Consensus 363 D~~Vp~~~s~~l~~~l~~~g~~vel~~~~g~~H~~~~l~~p~~~~~~~~~~~i~~Fl~~ 421 (454)
|++..+.++.+.+.. +..++.+|++|.|. .....++.|..|..-
T Consensus 145 DEvLDyr~a~a~y~~-------~~~~V~dgg~H~F~--------~f~~~l~~i~aF~gl 188 (191)
T COG3150 145 DEVLDYRQAVAYYHP-------CYEIVWDGGDHKFK--------GFSRHLQRIKAFKGL 188 (191)
T ss_pred cHHHHHHHHHHHhhh-------hhheeecCCCcccc--------chHHhHHHHHHHhcc
Confidence 988777777776664 44577889999833 346889999999753
No 162
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=97.56 E-value=0.00032 Score=66.14 Aligned_cols=85 Identities=18% Similarity=0.149 Sum_probs=47.2
Q ss_pred EEEEcCCCccCCcccchhHHHHHHHhCCcE---EEEEecCCCCCCChhHH----HHHHHHHHHHHHHhhhhcCCCCCcEE
Q 012898 206 VAFITGGAWIIGYKAWGSLLGQQLSERDII---VACIDYRNFPQGTIKDM----VKDASQGISFVCNNISEYGGDPDRIY 278 (454)
Q Consensus 206 vv~~HGgg~~~g~~~~~~~~~~~la~~G~~---Vv~~dyr~~~~~~~~~~----~~D~~~al~~l~~~~~~~g~d~~rI~ 278 (454)
|||+||.+ ......+..+.+.|.++||. |.+++|........... .+.+...-++|.+-.+.- .. +|-
T Consensus 4 VVlVHG~~--~~~~~~w~~~~~~l~~~GY~~~~vya~tyg~~~~~~~~~~~~~~~~~~~~l~~fI~~Vl~~T--Ga-kVD 78 (219)
T PF01674_consen 4 VVLVHGTG--GNAYSNWSTLAPYLKAAGYCDSEVYALTYGSGNGSPSVQNAHMSCESAKQLRAFIDAVLAYT--GA-KVD 78 (219)
T ss_dssp EEEE--TT--TTTCGGCCHHHHHHHHTT--CCCEEEE--S-CCHHTHHHHHHB-HHHHHHHHHHHHHHHHHH--T---EE
T ss_pred EEEECCCC--cchhhCHHHHHHHHHHcCCCcceeEeccCCCCCCCCcccccccchhhHHHHHHHHHHHHHhh--CC-EEE
Confidence 78999954 22445677899999999999 79999965443222211 122222333333333222 23 899
Q ss_pred EEEcCchHHHHHHHHHH
Q 012898 279 LMGQSAGAHIAACTLLE 295 (454)
Q Consensus 279 l~G~S~GG~la~~~a~~ 295 (454)
|+|||+||.++-.+...
T Consensus 79 IVgHS~G~~iaR~yi~~ 95 (219)
T PF01674_consen 79 IVGHSMGGTIARYYIKG 95 (219)
T ss_dssp EEEETCHHHHHHHHHHH
T ss_pred EEEcCCcCHHHHHHHHH
Confidence 99999999998777653
No 163
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=97.51 E-value=0.0021 Score=64.22 Aligned_cols=63 Identities=14% Similarity=0.277 Sum_probs=47.0
Q ss_pred CCCCEEEEEeCCCCCCChHHHHHHHHHHHHcCCCEEEEEeCCCCccccccCCCCCCcHHHHHHHHHHHHHh
Q 012898 351 LLPPIILFHGTADYSIPADASKNFANTLQRVGVRAESILYEGKTHTDLFLQDPMRGGKDDMFEDIVAIIHA 421 (454)
Q Consensus 351 ~~pPvLiihGe~D~~Vp~~~s~~l~~~l~~~g~~vel~~~~g~~H~~~~l~~p~~~~~~~~~~~i~~Fl~~ 421 (454)
...|+|++-=+.|.+.|+++.+++++.++..+. . .++-...||..+.+. .+.+...|..||+.
T Consensus 305 i~~~~lv~gi~sD~lfp~~~~~~~~~~L~~~~~-~-~~i~S~~GHDaFL~e------~~~~~~~i~~fL~~ 367 (368)
T COG2021 305 IKAPVLVVGITSDWLFPPELQRALAEALPAAGA-L-REIDSPYGHDAFLVE------SEAVGPLIRKFLAL 367 (368)
T ss_pred CccCEEEEEecccccCCHHHHHHHHHhccccCc-e-EEecCCCCchhhhcc------hhhhhHHHHHHhhc
Confidence 456999999999999999999999999997665 2 233455689744433 24566888888864
No 164
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=97.32 E-value=0.00082 Score=63.44 Aligned_cols=90 Identities=23% Similarity=0.308 Sum_probs=53.1
Q ss_pred CCcEEEEEcCCCccCCcccchhHHHHHHHhC-----CcEEEEEecCCCCCCChhHHHHH-HHHHHHHHHHhhhhcCCCCC
Q 012898 202 PKPVVAFITGGAWIIGYKAWGSLLGQQLSER-----DIIVACIDYRNFPQGTIKDMVKD-ASQGISFVCNNISEYGGDPD 275 (454)
Q Consensus 202 ~~Pvvv~~HGgg~~~g~~~~~~~~~~~la~~-----G~~Vv~~dyr~~~~~~~~~~~~D-~~~al~~l~~~~~~~g~d~~ 275 (454)
+.-+||++|| ..|+...+..+...+... +-.++...|........ ..++. ....+++|.+.+........
T Consensus 3 ~~hLvV~vHG---L~G~~~d~~~~~~~l~~~~~~~~~~~i~~~~~~~n~~~T~-~gI~~~g~rL~~eI~~~~~~~~~~~~ 78 (217)
T PF05057_consen 3 PVHLVVFVHG---LWGNPADMRYLKNHLEKIPEDLPNARIVVLGYSNNEFKTF-DGIDVCGERLAEEILEHIKDYESKIR 78 (217)
T ss_pred CCEEEEEeCC---CCCCHHHHHHHHHHHHHhhhhcchhhhhhhcccccccccc-hhhHHHHHHHHHHHHHhccccccccc
Confidence 3458999999 456666666666666651 22233233322211122 22222 33455666666655444456
Q ss_pred cEEEEEcCchHHHHHHHHHH
Q 012898 276 RIYLMGQSAGAHIAACTLLE 295 (454)
Q Consensus 276 rI~l~G~S~GG~la~~~a~~ 295 (454)
+|.++|||+||.++-.++..
T Consensus 79 ~IsfIgHSLGGli~r~al~~ 98 (217)
T PF05057_consen 79 KISFIGHSLGGLIARYALGL 98 (217)
T ss_pred cceEEEecccHHHHHHHHHH
Confidence 89999999999999766654
No 165
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=97.07 E-value=0.0041 Score=59.34 Aligned_cols=92 Identities=13% Similarity=0.057 Sum_probs=48.2
Q ss_pred CCCcEEEEEcCCCccCCcccchhHHHHHHHhCCc--EEEEEecCCCCCC-ChhHH---HHH-HHHHHHHHHHhhhhcCCC
Q 012898 201 GPKPVVAFITGGAWIIGYKAWGSLLGQQLSERDI--IVACIDYRNFPQG-TIKDM---VKD-ASQGISFVCNNISEYGGD 273 (454)
Q Consensus 201 ~~~Pvvv~~HGgg~~~g~~~~~~~~~~~la~~G~--~Vv~~dyr~~~~~-~~~~~---~~D-~~~al~~l~~~~~~~g~d 273 (454)
+++.++||+||-. ..........++.....++ .++.+.++..+.. .+... ... .....++|..... . ..
T Consensus 16 ~~~~vlvfVHGyn--~~f~~a~~r~aql~~~~~~~~~~i~FsWPS~g~~~~Y~~d~~~a~~s~~~l~~~L~~L~~-~-~~ 91 (233)
T PF05990_consen 16 PDKEVLVFVHGYN--NSFEDALRRAAQLAHDLGFPGVVILFSWPSDGSLLGYFYDRESARFSGPALARFLRDLAR-A-PG 91 (233)
T ss_pred CCCeEEEEEeCCC--CCHHHHHHHHHHHHHHhCCCceEEEEEcCCCCChhhhhhhhhhHHHHHHHHHHHHHHHHh-c-cC
Confidence 3567999999932 2211222223333333343 6788887754431 11111 111 1112222322222 1 23
Q ss_pred CCcEEEEEcCchHHHHHHHHHHH
Q 012898 274 PDRIYLMGQSAGAHIAACTLLEQ 296 (454)
Q Consensus 274 ~~rI~l~G~S~GG~la~~~a~~~ 296 (454)
..+|.|++||||+.+...++..-
T Consensus 92 ~~~I~ilaHSMG~rv~~~aL~~l 114 (233)
T PF05990_consen 92 IKRIHILAHSMGNRVLLEALRQL 114 (233)
T ss_pred CceEEEEEeCchHHHHHHHHHHH
Confidence 46999999999999998877653
No 166
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=97.07 E-value=0.016 Score=61.08 Aligned_cols=68 Identities=19% Similarity=0.213 Sum_probs=54.6
Q ss_pred CEEEEEeCCCCCCChHHHHHHHHHHHHcC-C-------CEEEEEeCCCCccccccCCCCCCcHHHHHHHHHHHHHhcChh
Q 012898 354 PIILFHGTADYSIPADASKNFANTLQRVG-V-------RAESILYEGKTHTDLFLQDPMRGGKDDMFEDIVAIIHADDQE 425 (454)
Q Consensus 354 PvLiihGe~D~~Vp~~~s~~l~~~l~~~g-~-------~vel~~~~g~~H~~~~l~~p~~~~~~~~~~~i~~Fl~~~~~~ 425 (454)
.+|+.||..|.+||...+.++++++.+.- . -+++...||++|+.--.. + ..-+.+..|++|+++...+
T Consensus 355 KLI~~HG~aD~~I~p~~ti~YY~~V~~~~g~~~~~v~dF~RlF~vPGm~HC~gG~g-~---~~~d~l~aL~~WVE~G~AP 430 (474)
T PF07519_consen 355 KLILYHGWADPLIPPQGTIDYYERVVARMGGALADVDDFYRLFMVPGMGHCGGGPG-P---DPFDALTALVDWVENGKAP 430 (474)
T ss_pred eEEEEecCCCCccCCCcHHHHHHHHHHhcccccccccceeEEEecCCCcccCCCCC-C---CCCCHHHHHHHHHhCCCCC
Confidence 89999999999999999999999987642 1 388999999999954321 1 1238999999999987654
No 167
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=97.03 E-value=0.019 Score=57.90 Aligned_cols=79 Identities=27% Similarity=0.515 Sum_probs=54.3
Q ss_pred EEEEEcC-CCccCCcccchhHHHHHHHhCCcEEEEEec-CCC-CCCChhHHHHHHHHHHHHHHHhhhhcCCCCCcEEEEE
Q 012898 205 VVAFITG-GAWIIGYKAWGSLLGQQLSERDIIVACIDY-RNF-PQGTIKDMVKDASQGISFVCNNISEYGGDPDRIYLMG 281 (454)
Q Consensus 205 vvv~~HG-gg~~~g~~~~~~~~~~~la~~G~~Vv~~dy-r~~-~~~~~~~~~~D~~~al~~l~~~~~~~g~d~~rI~l~G 281 (454)
+-||+-| ||| ..-....+..|+++|+-||-+|- |.+ .+........|....+++-..+ | ...|+.|+|
T Consensus 262 ~av~~SGDGGW----r~lDk~v~~~l~~~gvpVvGvdsLRYfW~~rtPe~~a~Dl~r~i~~y~~~---w--~~~~~~liG 332 (456)
T COG3946 262 VAVFYSGDGGW----RDLDKEVAEALQKQGVPVVGVDSLRYFWSERTPEQIAADLSRLIRFYARR---W--GAKRVLLIG 332 (456)
T ss_pred EEEEEecCCch----hhhhHHHHHHHHHCCCceeeeehhhhhhccCCHHHHHHHHHHHHHHHHHh---h--CcceEEEEe
Confidence 4455556 333 44445688999999999999984 333 2333344566777777777664 3 346999999
Q ss_pred cCchHHHHHHH
Q 012898 282 QSAGAHIAACT 292 (454)
Q Consensus 282 ~S~GG~la~~~ 292 (454)
+|.|+.+.-.+
T Consensus 333 ySfGADvlP~~ 343 (456)
T COG3946 333 YSFGADVLPFA 343 (456)
T ss_pred ecccchhhHHH
Confidence 99999987544
No 168
>PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants. Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis.
Probab=96.89 E-value=0.037 Score=52.68 Aligned_cols=208 Identities=13% Similarity=0.081 Sum_probs=107.1
Q ss_pred EEEEEcCCCccCCccc-chhHHHHHHHhCCcEEEEEecCCCCCCCh--hHHHHHHHHHHHHHHHhhhhcCCCCC--cEEE
Q 012898 205 VVAFITGGAWIIGYKA-WGSLLGQQLSERDIIVACIDYRNFPQGTI--KDMVKDASQGISFVCNNISEYGGDPD--RIYL 279 (454)
Q Consensus 205 vvv~~HGgg~~~g~~~-~~~~~~~~la~~G~~Vv~~dyr~~~~~~~--~~~~~D~~~al~~l~~~~~~~g~d~~--rI~l 279 (454)
.||.|=||+|...... .|..+.+.|+++||.|++.-|...-++.. .........+++.+.+.. +.++. .++=
T Consensus 18 gvihFiGGaf~ga~P~itYr~lLe~La~~Gy~ViAtPy~~tfDH~~~A~~~~~~f~~~~~~L~~~~---~~~~~~lP~~~ 94 (250)
T PF07082_consen 18 GVIHFIGGAFVGAAPQITYRYLLERLADRGYAVIATPYVVTFDHQAIAREVWERFERCLRALQKRG---GLDPAYLPVYG 94 (250)
T ss_pred EEEEEcCcceeccCcHHHHHHHHHHHHhCCcEEEEEecCCCCcHHHHHHHHHHHHHHHHHHHHHhc---CCCcccCCeee
Confidence 6888889998766554 67889999999999999999965433321 122333444444444432 23322 5788
Q ss_pred EEcCchHHHHHHHHHHHHHhhhCCCCCcccchhhhhhhccccCCCCCChhhhhcCCcccccCCCccccccCCCCCEEEEE
Q 012898 280 MGQSAGAHIAACTLLEQAIKETGEGESTTWSVSQIRAYFGLSGGIMDGEESLRQYSPEVLVQDPNTRHAVSLLPPIILFH 359 (454)
Q Consensus 280 ~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~pPvLiih 359 (454)
+|||+|+-+-+.+........ .+.....+.-......+.+.... .......+.|........+.. .-..+..+++-
T Consensus 95 vGHSlGcklhlLi~s~~~~~r-~gniliSFNN~~a~~aIP~~~~l--~~~l~~EF~PsP~ET~~li~~-~Y~~~rnLLIk 170 (250)
T PF07082_consen 95 VGHSLGCKLHLLIGSLFDVER-AGNILISFNNFPADEAIPLLEQL--APALRLEFTPSPEETRRLIRE-SYQVRRNLLIK 170 (250)
T ss_pred eecccchHHHHHHhhhccCcc-cceEEEecCChHHHhhCchHhhh--ccccccCccCCHHHHHHHHHH-hcCCccceEEE
Confidence 999999998887765432211 11111111111111111110000 000001111110000000000 01223578888
Q ss_pred eCCCCCCChHHHHHHHHHHHHcC-CCEEEEEeCCCCccccccCCCCCCcHH--HHHHHHHHHHHhcC
Q 012898 360 GTADYSIPADASKNFANTLQRVG-VRAESILYEGKTHTDLFLQDPMRGGKD--DMFEDIVAIIHADD 423 (454)
Q Consensus 360 Ge~D~~Vp~~~s~~l~~~l~~~g-~~vel~~~~g~~H~~~~l~~p~~~~~~--~~~~~i~~Fl~~~~ 423 (454)
=++|.+ +++..+.+.|++.. .-++....+| +|....-++..-+... .-++.+.+|+++..
T Consensus 171 F~~D~i---Dqt~~L~~~L~~r~~~~~~~~~L~G-~HLTPl~q~~~~~~g~~ftP~da~~q~~k~~~ 233 (250)
T PF07082_consen 171 FNDDDI---DQTDELEQILQQRFPDMVSIQTLPG-NHLTPLGQDLKWQVGSSFTPLDAVGQWLKQEV 233 (250)
T ss_pred ecCCCc---cchHHHHHHHhhhccccceEEeCCC-CCCCcCcCCcCCccCCccCchHHHHHHHHHHH
Confidence 788865 78999999988653 2366677786 8974443333111111 23456666666544
No 169
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.71 E-value=0.029 Score=53.20 Aligned_cols=88 Identities=19% Similarity=0.345 Sum_probs=56.5
Q ss_pred CCCcEEEEEcCCCccCCcccchhHHHHHHHhC-C--cEEEEEecCCCCCCC---hh-------H--HHHH-HHHHHHHHH
Q 012898 201 GPKPVVAFITGGAWIIGYKAWGSLLGQQLSER-D--IIVACIDYRNFPQGT---IK-------D--MVKD-ASQGISFVC 264 (454)
Q Consensus 201 ~~~Pvvv~~HGgg~~~g~~~~~~~~~~~la~~-G--~~Vv~~dyr~~~~~~---~~-------~--~~~D-~~~al~~l~ 264 (454)
.+++.++++.|+. |....|..+++.|.+. + ..++++..-++...+ .. + .++| +.--+++++
T Consensus 27 ~~~~li~~IpGNP---G~~gFY~~F~~~L~~~l~~r~~~wtIsh~~H~~~P~sl~~~~s~~~~eifsL~~QV~HKlaFik 103 (301)
T KOG3975|consen 27 EDKPLIVWIPGNP---GLLGFYTEFARHLHLNLIDRLPVWTISHAGHALMPASLREDHSHTNEEIFSLQDQVDHKLAFIK 103 (301)
T ss_pred CCceEEEEecCCC---CchhHHHHHHHHHHHhcccccceeEEeccccccCCcccccccccccccccchhhHHHHHHHHHH
Confidence 5678999999964 6666777888887765 3 445555544332211 00 0 1222 333556666
Q ss_pred HhhhhcCCCCCcEEEEEcCchHHHHHHHHHH
Q 012898 265 NNISEYGGDPDRIYLMGQSAGAHIAACTLLE 295 (454)
Q Consensus 265 ~~~~~~g~d~~rI~l~G~S~GG~la~~~a~~ 295 (454)
++.- ...+|+++|||-|+++.+.++..
T Consensus 104 ~~~P----k~~ki~iiGHSiGaYm~Lqil~~ 130 (301)
T KOG3975|consen 104 EYVP----KDRKIYIIGHSIGAYMVLQILPS 130 (301)
T ss_pred HhCC----CCCEEEEEecchhHHHHHHHhhh
Confidence 6542 33599999999999999988764
No 170
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=96.66 E-value=0.019 Score=57.22 Aligned_cols=92 Identities=15% Similarity=0.178 Sum_probs=54.4
Q ss_pred CCCcEEEEEcCCCccCCcccchhHHHHHHHhCCcEEE--EEecCCCCC------C--ChhHHHHHHHHHHHHHHHhhhhc
Q 012898 201 GPKPVVAFITGGAWIIGYKAWGSLLGQQLSERDIIVA--CIDYRNFPQ------G--TIKDMVKDASQGISFVCNNISEY 270 (454)
Q Consensus 201 ~~~Pvvv~~HGgg~~~g~~~~~~~~~~~la~~G~~Vv--~~dyr~~~~------~--~~~~~~~D~~~al~~l~~~~~~~ 270 (454)
..+-++||+||-+ .+........++.....|+..+ .+.++-.+. . .-.....+....+++|.+..
T Consensus 114 ~~k~vlvFvHGfN--ntf~dav~R~aqI~~d~g~~~~pVvFSWPS~g~l~~Yn~DreS~~~Sr~aLe~~lr~La~~~--- 188 (377)
T COG4782 114 SAKTVLVFVHGFN--NTFEDAVYRTAQIVHDSGNDGVPVVFSWPSRGSLLGYNYDRESTNYSRPALERLLRYLATDK--- 188 (377)
T ss_pred CCCeEEEEEcccC--CchhHHHHHHHHHHhhcCCCcceEEEEcCCCCeeeecccchhhhhhhHHHHHHHHHHHHhCC---
Confidence 3456999999943 2333333345666666654433 343332111 0 11223445666777776652
Q ss_pred CCCCCcEEEEEcCchHHHHHHHHHHHHHh
Q 012898 271 GGDPDRIYLMGQSAGAHIAACTLLEQAIK 299 (454)
Q Consensus 271 g~d~~rI~l~G~S~GG~la~~~a~~~~~~ 299 (454)
.-.+|+|++||||.+++...+.+-...
T Consensus 189 --~~~~I~ilAHSMGtwl~~e~LrQLai~ 215 (377)
T COG4782 189 --PVKRIYLLAHSMGTWLLMEALRQLAIR 215 (377)
T ss_pred --CCceEEEEEecchHHHHHHHHHHHhcc
Confidence 236899999999999999887764433
No 171
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=96.57 E-value=0.0067 Score=58.58 Aligned_cols=82 Identities=18% Similarity=0.154 Sum_probs=57.2
Q ss_pred cEEEEEcCCCccCCcccchhHHHHHHHhCCcEEEEEecCCCCCC-----ChhHHHHHHHHHHHHHHHhhhhcCCCCCcEE
Q 012898 204 PVVAFITGGAWIIGYKAWGSLLGQQLSERDIIVACIDYRNFPQG-----TIKDMVKDASQGISFVCNNISEYGGDPDRIY 278 (454)
Q Consensus 204 Pvvv~~HGgg~~~g~~~~~~~~~~~la~~G~~Vv~~dyr~~~~~-----~~~~~~~D~~~al~~l~~~~~~~g~d~~rI~ 278 (454)
|.|++||+++ |...-+..++..+... ..|+..++++.+.. .+.++.....++++-++- ...+.
T Consensus 1 ~pLF~fhp~~---G~~~~~~~L~~~l~~~-~~v~~l~a~g~~~~~~~~~~l~~~a~~yv~~Ir~~QP--------~GPy~ 68 (257)
T COG3319 1 PPLFCFHPAG---GSVLAYAPLAAALGPL-LPVYGLQAPGYGAGEQPFASLDDMAAAYVAAIRRVQP--------EGPYV 68 (257)
T ss_pred CCEEEEcCCC---CcHHHHHHHHHHhccC-ceeeccccCcccccccccCCHHHHHHHHHHHHHHhCC--------CCCEE
Confidence 5689999953 5666667777888777 88999999987532 233444444444443322 23799
Q ss_pred EEEcCchHHHHHHHHHHHH
Q 012898 279 LMGQSAGAHIAACTLLEQA 297 (454)
Q Consensus 279 l~G~S~GG~la~~~a~~~~ 297 (454)
|.|+|+||.+|..+|.+-.
T Consensus 69 L~G~S~GG~vA~evA~qL~ 87 (257)
T COG3319 69 LLGWSLGGAVAFEVAAQLE 87 (257)
T ss_pred EEeeccccHHHHHHHHHHH
Confidence 9999999999999887643
No 172
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=96.55 E-value=0.0068 Score=50.17 Aligned_cols=62 Identities=19% Similarity=0.291 Sum_probs=50.0
Q ss_pred CCCEEEEEeCCCCCCChHHHHHHHHHHHHcCCCEEEEEeCCCCccccccCCCCCCcHHHHHHHHHHHHHhcC
Q 012898 352 LPPIILFHGTADYSIPADASKNFANTLQRVGVRAESILYEGKTHTDLFLQDPMRGGKDDMFEDIVAIIHADD 423 (454)
Q Consensus 352 ~pPvLiihGe~D~~Vp~~~s~~l~~~l~~~g~~vel~~~~g~~H~~~~l~~p~~~~~~~~~~~i~~Fl~~~~ 423 (454)
.+|+|++.++.|.++|++.++++++.+. ..+++..++.||+.+.. ...-..+.+.+||....
T Consensus 34 ~~piL~l~~~~Dp~TP~~~a~~~~~~l~----~s~lvt~~g~gHg~~~~------~s~C~~~~v~~yl~~G~ 95 (103)
T PF08386_consen 34 APPILVLGGTHDPVTPYEGARAMAARLP----GSRLVTVDGAGHGVYAG------GSPCVDKAVDDYLLDGT 95 (103)
T ss_pred CCCEEEEecCcCCCCcHHHHHHHHHHCC----CceEEEEeccCcceecC------CChHHHHHHHHHHHcCC
Confidence 4699999999999999999999999987 37999999999994421 22456677778887644
No 173
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=96.23 E-value=0.13 Score=50.25 Aligned_cols=214 Identities=14% Similarity=0.216 Sum_probs=108.4
Q ss_pred eEEEEeeCCCCCCCcEEEEEcCCCccCCcccchh-----HHHHHHHhCCcEEEEEecCCCCCCC--hhH-----HHHHHH
Q 012898 190 RLDLYFPKSSDGPKPVVAFITGGAWIIGYKAWGS-----LLGQQLSERDIIVACIDYRNFPQGT--IKD-----MVKDAS 257 (454)
Q Consensus 190 ~l~vy~P~~~~~~~Pvvv~~HGgg~~~g~~~~~~-----~~~~~la~~G~~Vv~~dyr~~~~~~--~~~-----~~~D~~ 257 (454)
.+++++-.+.++++|++|=+|-=|- ....-+. ...+.+. ..+.++=+|.+|..++. +|. .+++..
T Consensus 10 ~v~V~v~G~~~~~kp~ilT~HDvGl--Nh~scF~~ff~~~~m~~i~-~~f~i~Hi~aPGqe~ga~~~p~~y~yPsmd~LA 86 (283)
T PF03096_consen 10 SVHVTVQGDPKGNKPAILTYHDVGL--NHKSCFQGFFNFEDMQEIL-QNFCIYHIDAPGQEEGAATLPEGYQYPSMDQLA 86 (283)
T ss_dssp EEEEEEESS--TTS-EEEEE--TT----HHHHCHHHHCSHHHHHHH-TTSEEEEEE-TTTSTT-----TT-----HHHHH
T ss_pred EEEEEEEecCCCCCceEEEeccccc--cchHHHHHHhcchhHHHHh-hceEEEEEeCCCCCCCcccccccccccCHHHHH
Confidence 4666665555568999999998541 1222011 2233333 36999999999865542 222 244555
Q ss_pred HHHHHHHHhhhhcCCCCCcEEEEEcCchHHHHHHHHHHHHHhhhCCC------CCccc---chhhhhhhc----cccCC-
Q 012898 258 QGISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLLEQAIKETGEG------ESTTW---SVSQIRAYF----GLSGG- 323 (454)
Q Consensus 258 ~al~~l~~~~~~~g~d~~rI~l~G~S~GG~la~~~a~~~~~~~~~~~------~~~~~---~~~~i~~~~----~~~g~- 323 (454)
+.+..+.++ ||++ .++-+|--+||++-+.+|+.++.+..+.. ....| ....+.... +..+.
T Consensus 87 e~l~~Vl~~---f~lk--~vIg~GvGAGAnIL~rfAl~~p~~V~GLiLvn~~~~~~gw~Ew~~~K~~~~~L~~~gmt~~~ 161 (283)
T PF03096_consen 87 EMLPEVLDH---FGLK--SVIGFGVGAGANILARFALKHPERVLGLILVNPTCTAAGWMEWFYQKLSSWLLYSYGMTSSV 161 (283)
T ss_dssp CTHHHHHHH---HT-----EEEEEETHHHHHHHHHHHHSGGGEEEEEEES---S---HHHHHHHHHH-------CTTS-H
T ss_pred HHHHHHHHh---CCcc--EEEEEeeccchhhhhhccccCccceeEEEEEecCCCCccHHHHHHHHHhcccccccccccch
Confidence 555555444 4554 79999999999999999999887754431 11111 111111111 11110
Q ss_pred -------------CCCChhhh-------h-cCCcccc--------cCCCccccccCCCCCEEEEEeCCCCCCChHHHHHH
Q 012898 324 -------------IMDGEESL-------R-QYSPEVL--------VQDPNTRHAVSLLPPIILFHGTADYSIPADASKNF 374 (454)
Q Consensus 324 -------------~~~~~~~~-------~-~~~p~~~--------~~~~~~~~~~~~~pPvLiihGe~D~~Vp~~~s~~l 374 (454)
.....+.. . ...|... .+.+.........+|+|++.|+.-+. .+.+.++
T Consensus 162 ~d~Ll~h~Fg~~~~~~n~Dlv~~yr~~l~~~~Np~Nl~~f~~sy~~R~DL~~~~~~~~c~vLlvvG~~Sp~--~~~vv~~ 239 (283)
T PF03096_consen 162 KDYLLWHYFGKEEEENNSDLVQTYRQHLDERINPKNLALFLNSYNSRTDLSIERPSLGCPVLLVVGDNSPH--VDDVVEM 239 (283)
T ss_dssp HHHHHHHHS-HHHHHCT-HHHHHHHHHHHT-TTHHHHHHHHHHHHT-----SECTTCCS-EEEEEETTSTT--HHHHHHH
T ss_pred HHhhhhcccccccccccHHHHHHHHHHHhcCCCHHHHHHHHHHHhccccchhhcCCCCCCeEEEEecCCcc--hhhHHHH
Confidence 00000000 0 0111110 00000111222347999999999987 7889999
Q ss_pred HHHHHHcCCCEEEEEeCCCCccccccCCCCCCcHHHHHHHHHHHHHh
Q 012898 375 ANTLQRVGVRAESILYEGKTHTDLFLQDPMRGGKDDMFEDIVAIIHA 421 (454)
Q Consensus 375 ~~~l~~~g~~vel~~~~g~~H~~~~l~~p~~~~~~~~~~~i~~Fl~~ 421 (454)
..+|.. .+.++..+++.|=. .....| ..+.+.+.=|+..
T Consensus 240 ns~Ldp--~~ttllkv~dcGgl-V~eEqP-----~klaea~~lFlQG 278 (283)
T PF03096_consen 240 NSKLDP--TKTTLLKVADCGGL-VLEEQP-----GKLAEAFKLFLQG 278 (283)
T ss_dssp HHHS-C--CCEEEEEETT-TT--HHHH-H-----HHHHHHHHHHHHH
T ss_pred HhhcCc--ccceEEEecccCCc-ccccCc-----HHHHHHHHHHHcc
Confidence 998863 47899999998654 333444 6777777777764
No 174
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=96.22 E-value=0.016 Score=60.55 Aligned_cols=95 Identities=17% Similarity=0.170 Sum_probs=60.1
Q ss_pred CCcEEEEEcCCCccCCcccchhHHHHHHHhC-CcEEEEEecCCCCCCCh--------------hHHHHHHHHHHHHHHHh
Q 012898 202 PKPVVAFITGGAWIIGYKAWGSLLGQQLSER-DIIVACIDYRNFPQGTI--------------KDMVKDASQGISFVCNN 266 (454)
Q Consensus 202 ~~Pvvv~~HGgg~~~g~~~~~~~~~~~la~~-G~~Vv~~dyr~~~~~~~--------------~~~~~D~~~al~~l~~~ 266 (454)
+.|++|++-|=+-. ........+...||++ |-.++++++|.+|++.. ..++.|+...+++++..
T Consensus 28 ~gpifl~~ggE~~~-~~~~~~~~~~~~lA~~~~a~~v~lEHRyYG~S~P~~~~s~~nL~yLt~~QALaD~a~F~~~~~~~ 106 (434)
T PF05577_consen 28 GGPIFLYIGGEGPI-EPFWINNGFMWELAKEFGALVVALEHRYYGKSQPFGDLSTENLRYLTSEQALADLAYFIRYVKKK 106 (434)
T ss_dssp TSEEEEEE--SS-H-HHHHHH-HHHHHHHHHHTEEEEEE--TTSTTB-TTGGGGGSTTTC-SHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCcc-chhhhcCChHHHHHHHcCCcEEEeehhhhcCCCCccccchhhHHhcCHHHHHHHHHHHHHHHHHh
Confidence 37888887442211 1111112255677777 99999999999987741 23588888888888854
Q ss_pred hhhcCCCCCcEEEEEcCchHHHHHHHHHHHHHh
Q 012898 267 ISEYGGDPDRIYLMGQSAGAHIAACTLLEQAIK 299 (454)
Q Consensus 267 ~~~~g~d~~rI~l~G~S~GG~la~~~a~~~~~~ 299 (454)
.. ..+..+++++|-|.||.+|+++-.+++..
T Consensus 107 ~~--~~~~~pwI~~GgSY~G~Laaw~r~kyP~~ 137 (434)
T PF05577_consen 107 YN--TAPNSPWIVFGGSYGGALAAWFRLKYPHL 137 (434)
T ss_dssp TT--TGCC--EEEEEETHHHHHHHHHHHH-TTT
T ss_pred hc--CCCCCCEEEECCcchhHHHHHHHhhCCCe
Confidence 32 12445899999999999999998887654
No 175
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=95.91 E-value=0.045 Score=57.13 Aligned_cols=73 Identities=12% Similarity=0.150 Sum_probs=48.3
Q ss_pred ccchhHHHHHHHhCCcEEEEEecCCCCCCCh-----hHHHHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCchHHHHHHHH
Q 012898 219 KAWGSLLGQQLSERDIIVACIDYRNFPQGTI-----KDMVKDASQGISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTL 293 (454)
Q Consensus 219 ~~~~~~~~~~la~~G~~Vv~~dyr~~~~~~~-----~~~~~D~~~al~~l~~~~~~~g~d~~rI~l~G~S~GG~la~~~a 293 (454)
...+..+.+.|.+.||.+ ..|.+++|...- ...+.+....++.+.+ ..+. ++|.|+||||||.++..++
T Consensus 107 ~~~~~~li~~L~~~GY~~-~~dL~g~gYDwR~~~~~~~~~~~Lk~lIe~~~~---~~g~--~kV~LVGHSMGGlva~~fl 180 (440)
T PLN02733 107 VYYFHDMIEQLIKWGYKE-GKTLFGFGYDFRQSNRLPETMDGLKKKLETVYK---ASGG--KKVNIISHSMGGLLVKCFM 180 (440)
T ss_pred HHHHHHHHHHHHHcCCcc-CCCcccCCCCccccccHHHHHHHHHHHHHHHHH---HcCC--CCEEEEEECHhHHHHHHHH
Confidence 345677889999999876 667777765432 2223333333333332 2333 5899999999999999888
Q ss_pred HHHH
Q 012898 294 LEQA 297 (454)
Q Consensus 294 ~~~~ 297 (454)
..++
T Consensus 181 ~~~p 184 (440)
T PLN02733 181 SLHS 184 (440)
T ss_pred HHCC
Confidence 7654
No 176
>KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=95.87 E-value=0.094 Score=48.97 Aligned_cols=86 Identities=21% Similarity=0.187 Sum_probs=57.8
Q ss_pred cEEEEEcCCCccCCcccchhHHHHHHHhCCcEEEEEecC----CCCCCChhHHHHHHHHHHHHHHHhhhhcCCCCCcEEE
Q 012898 204 PVVAFITGGAWIIGYKAWGSLLGQQLSERDIIVACIDYR----NFPQGTIKDMVKDASQGISFVCNNISEYGGDPDRIYL 279 (454)
Q Consensus 204 Pvvv~~HGgg~~~g~~~~~~~~~~~la~~G~~Vv~~dyr----~~~~~~~~~~~~D~~~al~~l~~~~~~~g~d~~rI~l 279 (454)
-.|||+-|-|-..-.-.....+...|.+.+|-.|-+..+ +++...+....+|+..+++.+... .....|+|
T Consensus 37 ~~vvfiGGLgdgLl~~~y~~~L~~~lde~~wslVq~q~~Ssy~G~Gt~slk~D~edl~~l~~Hi~~~-----~fSt~vVL 111 (299)
T KOG4840|consen 37 VKVVFIGGLGDGLLICLYTTMLNRYLDENSWSLVQPQLRSSYNGYGTFSLKDDVEDLKCLLEHIQLC-----GFSTDVVL 111 (299)
T ss_pred EEEEEEcccCCCccccccHHHHHHHHhhccceeeeeeccccccccccccccccHHHHHHHHHHhhcc-----CcccceEE
Confidence 356666553321112234456788888999999988755 455555666677777777755432 22348999
Q ss_pred EEcCchHHHHHHHHH
Q 012898 280 MGQSAGAHIAACTLL 294 (454)
Q Consensus 280 ~G~S~GG~la~~~a~ 294 (454)
+|||-|..-.+.++.
T Consensus 112 ~GhSTGcQdi~yYlT 126 (299)
T KOG4840|consen 112 VGHSTGCQDIMYYLT 126 (299)
T ss_pred EecCccchHHHHHHH
Confidence 999999999888773
No 177
>KOG1551 consensus Uncharacterized conserved protein [Function unknown]
Probab=95.82 E-value=0.052 Score=51.84 Aligned_cols=60 Identities=22% Similarity=0.253 Sum_probs=45.1
Q ss_pred CEEEEEeCCCCCCChHHHHHHHHHHHHcCCCEEEEEeCCCCccccccCCCCCCcHHHHHHHHHHHHHhcC
Q 012898 354 PIILFHGTADYSIPADASKNFANTLQRVGVRAESILYEGKTHTDLFLQDPMRGGKDDMFEDIVAIIHADD 423 (454)
Q Consensus 354 PvLiihGe~D~~Vp~~~s~~l~~~l~~~g~~vel~~~~g~~H~~~~l~~p~~~~~~~~~~~i~~Fl~~~~ 423 (454)
-++++..++|..||......+.+.+. .+|+...+ +||..-++.. .+.+..+|.+-|++.+
T Consensus 308 l~ivv~A~~D~Yipr~gv~~lQ~~WP----g~eVr~~e-gGHVsayl~k-----~dlfRR~I~d~L~R~~ 367 (371)
T KOG1551|consen 308 LIIVVQAKEDAYIPRTGVRSLQEIWP----GCEVRYLE-GGHVSAYLFK-----QDLFRRAIVDGLDRLD 367 (371)
T ss_pred eEEEEEecCCccccccCcHHHHHhCC----CCEEEEee-cCceeeeehh-----chHHHHHHHHHHHhhh
Confidence 36788899999999988888888877 45666666 5898776552 3677788888777654
No 178
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=95.71 E-value=0.018 Score=60.54 Aligned_cols=64 Identities=14% Similarity=0.194 Sum_probs=47.8
Q ss_pred CCEEEEEeCCCCCCChHHHHHHHHHHHHc-----------------C---------C-----CEEEEEeCCCCccccccC
Q 012898 353 PPIILFHGTADYSIPADASKNFANTLQRV-----------------G---------V-----RAESILYEGKTHTDLFLQ 401 (454)
Q Consensus 353 pPvLiihGe~D~~Vp~~~s~~l~~~l~~~-----------------g---------~-----~vel~~~~g~~H~~~~l~ 401 (454)
-++||..|+.|.+|+.-..+++.+.|+-. + . +..+..+.++||. ....
T Consensus 365 ikVLiYnGd~D~icn~~Gt~~wi~~L~w~g~~~f~~a~~~~w~~~~~~v~G~vk~~~~~~~~~l~~~~V~~AGH~-vp~d 443 (462)
T PTZ00472 365 VRVMIYAGDMDFICNWIGNKAWTLALQWPGNAEFNAAPDVPFSAVDGRWAGLVRSAASNTSSGFSFVQVYNAGHM-VPMD 443 (462)
T ss_pred ceEEEEECCcCeecCcHhHHHHHHhCCCCCccchhhcCccccEecCCEeceEEEEEecccCCCeEEEEECCCCcc-Chhh
Confidence 49999999999999999888888877511 1 1 4566777899997 4444
Q ss_pred CCCCCcHHHHHHHHHHHHHhc
Q 012898 402 DPMRGGKDDMFEDIVAIIHAD 422 (454)
Q Consensus 402 ~p~~~~~~~~~~~i~~Fl~~~ 422 (454)
.| +...+.+.+|+...
T Consensus 444 ~P-----~~~~~~i~~fl~~~ 459 (462)
T PTZ00472 444 QP-----AVALTMINRFLRNR 459 (462)
T ss_pred HH-----HHHHHHHHHHHcCC
Confidence 34 67778888888754
No 179
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=95.70 E-value=0.015 Score=57.33 Aligned_cols=94 Identities=18% Similarity=0.110 Sum_probs=63.4
Q ss_pred CCcEEEEEcCCCccCCcccchhHHHHHHHhCCcEEEEEecCCCCCCC-hhHHHHHHHHHHHHHHHhhhhcCCCCCcEEEE
Q 012898 202 PKPVVAFITGGAWIIGYKAWGSLLGQQLSERDIIVACIDYRNFPQGT-IKDMVKDASQGISFVCNNISEYGGDPDRIYLM 280 (454)
Q Consensus 202 ~~Pvvv~~HGgg~~~g~~~~~~~~~~~la~~G~~Vv~~dyr~~~~~~-~~~~~~D~~~al~~l~~~~~~~g~d~~rI~l~ 280 (454)
..-.||++-|++ |..+- .....-++.||.|+-++++++..+. .|-...|..++-.-++-.+..+|..++.|+|.
T Consensus 242 gq~LvIC~EGNA---GFYEv--G~m~tP~~lgYsvLGwNhPGFagSTG~P~p~n~~nA~DaVvQfAI~~Lgf~~edIily 316 (517)
T KOG1553|consen 242 GQDLVICFEGNA---GFYEV--GVMNTPAQLGYSVLGWNHPGFAGSTGLPYPVNTLNAADAVVQFAIQVLGFRQEDIILY 316 (517)
T ss_pred CceEEEEecCCc---cceEe--eeecChHHhCceeeccCCCCccccCCCCCcccchHHHHHHHHHHHHHcCCCccceEEE
Confidence 356888998854 22110 1223345679999999999987664 34444443333333333455678889999999
Q ss_pred EcCchHHHHHHHHHHHHHhh
Q 012898 281 GQSAGAHIAACTLLEQAIKE 300 (454)
Q Consensus 281 G~S~GG~la~~~a~~~~~~~ 300 (454)
|+|.||.-++++|..+++..
T Consensus 317 gWSIGGF~~~waAs~YPdVk 336 (517)
T KOG1553|consen 317 GWSIGGFPVAWAASNYPDVK 336 (517)
T ss_pred EeecCCchHHHHhhcCCCce
Confidence 99999999999998876543
No 180
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=95.49 E-value=0.32 Score=53.07 Aligned_cols=88 Identities=19% Similarity=0.224 Sum_probs=52.9
Q ss_pred EEEEEcCCCccCCcccchhHHHHHHHh----------------CCcEEEEEecCCC----CCCChhHHHHHHHHHHHHHH
Q 012898 205 VVAFITGGAWIIGYKAWGSLLGQQLSE----------------RDIIVACIDYRNF----PQGTIKDMVKDASQGISFVC 264 (454)
Q Consensus 205 vvv~~HGgg~~~g~~~~~~~~~~~la~----------------~G~~Vv~~dyr~~----~~~~~~~~~~D~~~al~~l~ 264 (454)
-|+|+.|++ |+....+.++...+. ..+...++|+-.- -....-+..+=+.+|++++.
T Consensus 91 PVLFIPGNA---GSyKQvRSiAS~a~n~y~~~~~e~t~~~d~~~~~DFFaVDFnEe~tAm~G~~l~dQtEYV~dAIk~IL 167 (973)
T KOG3724|consen 91 PVLFIPGNA---GSYKQVRSIASVAQNAYQGGPFEKTEDRDNPFSFDFFAVDFNEEFTAMHGHILLDQTEYVNDAIKYIL 167 (973)
T ss_pred eEEEecCCC---CchHHHHHHHHHHhhhhcCCchhhhhcccCccccceEEEcccchhhhhccHhHHHHHHHHHHHHHHHH
Confidence 589999954 666665555555442 1245555554320 00112233444566777777
Q ss_pred Hhhhh-cCCC---CCcEEEEEcCchHHHHHHHHHH
Q 012898 265 NNISE-YGGD---PDRIYLMGQSAGAHIAACTLLE 295 (454)
Q Consensus 265 ~~~~~-~g~d---~~rI~l~G~S~GG~la~~~a~~ 295 (454)
+...+ -..+ |..|+|+||||||.+|..++..
T Consensus 168 slYr~~~e~~~p~P~sVILVGHSMGGiVAra~~tl 202 (973)
T KOG3724|consen 168 SLYRGEREYASPLPHSVILVGHSMGGIVARATLTL 202 (973)
T ss_pred HHhhcccccCCCCCceEEEEeccchhHHHHHHHhh
Confidence 66543 2234 6789999999999999877654
No 181
>COG4947 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=95.41 E-value=0.097 Score=46.90 Aligned_cols=172 Identities=19% Similarity=0.218 Sum_probs=92.9
Q ss_pred CCCCcEEEEEcCCCccCCccc--chhHHHHHHHhCC-cEEEEEecCCCCCCCh------hHHHHHHHHHHHHHHHhhhhc
Q 012898 200 DGPKPVVAFITGGAWIIGYKA--WGSLLGQQLSERD-IIVACIDYRNFPQGTI------KDMVKDASQGISFVCNNISEY 270 (454)
Q Consensus 200 ~~~~Pvvv~~HGgg~~~g~~~--~~~~~~~~la~~G-~~Vv~~dyr~~~~~~~------~~~~~D~~~al~~l~~~~~~~ 270 (454)
....|||||---+|-.....+ ....++. +-+.| ....+++- +..++.+ ...+.--.+.-+|+.+..
T Consensus 24 HaG~pVvvFpts~Grf~eyed~G~v~ala~-fie~G~vQlft~~g-ldsESf~a~h~~~adr~~rH~AyerYv~eEa--- 98 (227)
T COG4947 24 HAGIPVVVFPTSGGRFNEYEDFGMVDALAS-FIEEGLVQLFTLSG-LDSESFLATHKNAADRAERHRAYERYVIEEA--- 98 (227)
T ss_pred CCCCcEEEEecCCCcchhhhhcccHHHHHH-HHhcCcEEEEEecc-cchHhHhhhcCCHHHHHHHHHHHHHHHHHhh---
Confidence 356789999877652211111 1112222 22344 33344431 2222222 122333445556777763
Q ss_pred CCCCCcEEEEEcCchHHHHHHHHHHHHHhhhCCCCCcccchhhhhhhccccCCCCCChhhhhcC--------CcccccCC
Q 012898 271 GGDPDRIYLMGQSAGAHIAACTLLEQAIKETGEGESTTWSVSQIRAYFGLSGGIMDGEESLRQY--------SPEVLVQD 342 (454)
Q Consensus 271 g~d~~rI~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~~~~--------~p~~~~~~ 342 (454)
-|.+..+.|.||||..|+.+..+++.. +.+.+.++| .++....+..+ +|..+...
T Consensus 99 --lpgs~~~sgcsmGayhA~nfvfrhP~l--------------ftkvialSG-vYdardffg~yyddDv~ynsP~dylpg 161 (227)
T COG4947 99 --LPGSTIVSGCSMGAYHAANFVFRHPHL--------------FTKVIALSG-VYDARDFFGGYYDDDVYYNSPSDYLPG 161 (227)
T ss_pred --cCCCccccccchhhhhhhhhheeChhH--------------hhhheeecc-eeeHHHhccccccCceeecChhhhccC
Confidence 245688999999999999999886544 334444444 22222222222 22222211
Q ss_pred Ccc---ccccCCCCCEEEEEeCCCCCCChHHHHHHHHHHHHcCCCEEEEEeCCCCcc
Q 012898 343 PNT---RHAVSLLPPIILFHGTADYSIPADASKNFANTLQRVGVRAESILYEGKTHT 396 (454)
Q Consensus 343 ~~~---~~~~~~~pPvLiihGe~D~~Vp~~~s~~l~~~l~~~g~~vel~~~~g~~H~ 396 (454)
... -+..+ ..-+.++.|+.|+. ..+.+.+.+.+.+..++..+.+..|..|.
T Consensus 162 ~~dp~~l~rlr-~~~~vfc~G~e~~~--L~~~~~L~~~l~dKqipaw~~~WggvaHd 215 (227)
T COG4947 162 LADPFRLERLR-RIDMVFCIGDEDPF--LDNNQHLSRLLSDKQIPAWMHVWGGVAHD 215 (227)
T ss_pred CcChHHHHHHh-hccEEEEecCcccc--ccchHHHHHHhccccccHHHHHhcccccc
Confidence 110 01111 12578888988887 45678888888887778888888887786
No 182
>PLN02633 palmitoyl protein thioesterase family protein
Probab=95.38 E-value=0.24 Score=48.84 Aligned_cols=91 Identities=15% Similarity=0.104 Sum_probs=49.5
Q ss_pred CCcEEEEEcCCCccCCcccchhHHHHHHHhC-CcEEEEEecCCCCCCC-hhHHHHHHHHHHHHHHHhhhhcCCCCCcEEE
Q 012898 202 PKPVVAFITGGAWIIGYKAWGSLLGQQLSER-DIIVACIDYRNFPQGT-IKDMVKDASQGISFVCNNISEYGGDPDRIYL 279 (454)
Q Consensus 202 ~~Pvvv~~HGgg~~~g~~~~~~~~~~~la~~-G~~Vv~~dyr~~~~~~-~~~~~~D~~~al~~l~~~~~~~g~d~~rI~l 279 (454)
..|+ |+.||-|-...+ .....+.+.+.+. |.-+.++..-...+.. +-...+.+..+.+-|.+ ..++ .+-+.+
T Consensus 25 ~~P~-ViwHG~GD~c~~-~g~~~~~~l~~~~~g~~~~~i~ig~~~~~s~~~~~~~Qve~vce~l~~-~~~l---~~G~na 98 (314)
T PLN02633 25 SVPF-IMLHGIGTQCSD-ATNANFTQLLTNLSGSPGFCLEIGNGVGDSWLMPLTQQAEIACEKVKQ-MKEL---SQGYNI 98 (314)
T ss_pred CCCe-EEecCCCcccCC-chHHHHHHHHHhCCCCceEEEEECCCccccceeCHHHHHHHHHHHHhh-chhh---hCcEEE
Confidence 4554 555996532222 2445566666555 7777777553322222 22222223333333333 2222 134889
Q ss_pred EEcCchHHHHHHHHHHHHH
Q 012898 280 MGQSAGAHIAACTLLEQAI 298 (454)
Q Consensus 280 ~G~S~GG~la~~~a~~~~~ 298 (454)
+|+|.||.++-.++.+.+.
T Consensus 99 IGfSQGGlflRa~ierc~~ 117 (314)
T PLN02633 99 VGRSQGNLVARGLIEFCDG 117 (314)
T ss_pred EEEccchHHHHHHHHHCCC
Confidence 9999999999888777543
No 183
>KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown]
Probab=95.37 E-value=0.32 Score=47.38 Aligned_cols=216 Identities=15% Similarity=0.182 Sum_probs=119.2
Q ss_pred EEEEeeCCCCCCCcEEEEEcCCCccCCcc--c-chhHHHHHHHhCCcEEEEEecCCCCCCC--hh-----HHHHHHHHHH
Q 012898 191 LDLYFPKSSDGPKPVVAFITGGAWIIGYK--A-WGSLLGQQLSERDIIVACIDYRNFPQGT--IK-----DMVKDASQGI 260 (454)
Q Consensus 191 l~vy~P~~~~~~~Pvvv~~HGgg~~~g~~--~-~~~~~~~~la~~G~~Vv~~dyr~~~~~~--~~-----~~~~D~~~al 260 (454)
++|++-.+.++++|++|=+|.-|-.--+. . ......+.+.++ +.|+-+|-+|..++. +| ..++|+.+.+
T Consensus 34 v~V~V~Gd~~~~kpaiiTyhDlglN~~scFq~ff~~p~m~ei~~~-fcv~HV~~PGqe~gAp~~p~~y~yPsmd~LAd~l 112 (326)
T KOG2931|consen 34 VHVTVYGDPKGNKPAIITYHDLGLNHKSCFQGFFNFPDMAEILEH-FCVYHVDAPGQEDGAPSFPEGYPYPSMDDLADML 112 (326)
T ss_pred EEEEEecCCCCCCceEEEecccccchHhHhHHhhcCHhHHHHHhh-eEEEecCCCccccCCccCCCCCCCCCHHHHHHHH
Confidence 44555445555789999999855211110 0 111244556666 999999988753331 11 1245666666
Q ss_pred HHHHHhhhhcCCCCCcEEEEEcCchHHHHHHHHHHHHHhhhCCC------CCcc---cchhhhhhhc----cccCC----
Q 012898 261 SFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLLEQAIKETGEG------ESTT---WSVSQIRAYF----GLSGG---- 323 (454)
Q Consensus 261 ~~l~~~~~~~g~d~~rI~l~G~S~GG~la~~~a~~~~~~~~~~~------~~~~---~~~~~i~~~~----~~~g~---- 323 (454)
-.+.++ |+. +.|.-+|--+|+++-+.+|+.++++..+.. .... |....+...+ +..+.
T Consensus 113 ~~VL~~---f~l--k~vIg~GvGAGAyIL~rFAl~hp~rV~GLvLIn~~~~a~gwiew~~~K~~s~~l~~~Gmt~~~~d~ 187 (326)
T KOG2931|consen 113 PEVLDH---FGL--KSVIGMGVGAGAYILARFALNHPERVLGLVLINCDPCAKGWIEWAYNKVSSNLLYYYGMTQGVKDY 187 (326)
T ss_pred HHHHHh---cCc--ceEEEecccccHHHHHHHHhcChhheeEEEEEecCCCCchHHHHHHHHHHHHHHHhhchhhhHHHH
Confidence 666555 333 479999999999999999999888755431 1111 2222222111 11111
Q ss_pred ---------CCCC-hhhhhc--------CCcccc-------cCCCccc-----cccCCCCCEEEEEeCCCCCCChHHHHH
Q 012898 324 ---------IMDG-EESLRQ--------YSPEVL-------VQDPNTR-----HAVSLLPPIILFHGTADYSIPADASKN 373 (454)
Q Consensus 324 ---------~~~~-~~~~~~--------~~p~~~-------~~~~~~~-----~~~~~~pPvLiihGe~D~~Vp~~~s~~ 373 (454)
.... .+.... ..+... .....+. ......+|+|++.|+.-+. .+...+
T Consensus 188 ll~H~Fg~e~~~~~~diVq~Yr~~l~~~~N~~Nl~~fl~ayn~R~DL~~~r~~~~~tlkc~vllvvGd~Sp~--~~~vv~ 265 (326)
T KOG2931|consen 188 LLAHHFGKEELGNNSDIVQEYRQHLGERLNPKNLALFLNAYNGRRDLSIERPKLGTTLKCPVLLVVGDNSPH--VSAVVE 265 (326)
T ss_pred HHHHHhccccccccHHHHHHHHHHHHhcCChhHHHHHHHHhcCCCCccccCCCcCccccccEEEEecCCCch--hhhhhh
Confidence 0000 000000 011100 0000000 0113347999999999877 567777
Q ss_pred HHHHHHHcCCCEEEEEeCCCCccccccCCCCCCcHHHHHHHHHHHHHhc
Q 012898 374 FANTLQRVGVRAESILYEGKTHTDLFLQDPMRGGKDDMFEDIVAIIHAD 422 (454)
Q Consensus 374 l~~~l~~~g~~vel~~~~g~~H~~~~l~~p~~~~~~~~~~~i~~Fl~~~ 422 (454)
+-.+|.. ....+..+.+.|-. .....| ..+.+.+.=|+...
T Consensus 266 ~n~~Ldp--~~ttllk~~d~g~l-~~e~qP-----~kl~ea~~~FlqG~ 306 (326)
T KOG2931|consen 266 CNSKLDP--TYTTLLKMADCGGL-VQEEQP-----GKLAEAFKYFLQGM 306 (326)
T ss_pred hhcccCc--ccceEEEEcccCCc-ccccCc-----hHHHHHHHHHHccC
Confidence 7777753 36788888887765 333344 67777777777754
No 184
>KOG2521 consensus Uncharacterized conserved protein [Function unknown]
Probab=95.17 E-value=0.6 Score=47.06 Aligned_cols=68 Identities=15% Similarity=0.219 Sum_probs=58.9
Q ss_pred CEEEEEeCCCCCCChHHHHHHHHHHHHcCCCEEEEEeCCCCccccccCCCCCCcHHHHHHHHHHHHHhcChhh
Q 012898 354 PIILFHGTADYSIPADASKNFANTLQRVGVRAESILYEGKTHTDLFLQDPMRGGKDDMFEDIVAIIHADDQEA 426 (454)
Q Consensus 354 PvLiihGe~D~~Vp~~~s~~l~~~l~~~g~~vel~~~~g~~H~~~~l~~p~~~~~~~~~~~i~~Fl~~~~~~~ 426 (454)
+.+.+.++.|.++|.++.+++.+..++.|..++..-+.+.-|.-.+. .....+.+...+|++......
T Consensus 227 ~~ly~~s~~d~v~~~~~ie~f~~~~~~~g~~v~s~~~~ds~H~~h~r-----~~p~~y~~~~~~Fl~~~~~~~ 294 (350)
T KOG2521|consen 227 NQLYLYSDNDDVLPADEIEKFIALRREKGVNVKSVKFKDSEHVAHFR-----SFPKTYLKKCSEFLRSVISSY 294 (350)
T ss_pred cceeecCCccccccHHHHHHHHHHHHhcCceEEEeeccCccceeeec-----cCcHHHHHHHHHHHHhccccc
Confidence 67888899999999999999999999999999999999999985433 345899999999999877543
No 185
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=95.03 E-value=0.056 Score=64.07 Aligned_cols=86 Identities=14% Similarity=0.059 Sum_probs=53.2
Q ss_pred CcEEEEEcCCCccCCcccchhHHHHHHHhCCcEEEEEecCCCCCCC-hhHHHHHHHHHHHHHHHhhhhcCCCCCcEEEEE
Q 012898 203 KPVVAFITGGAWIIGYKAWGSLLGQQLSERDIIVACIDYRNFPQGT-IKDMVKDASQGISFVCNNISEYGGDPDRIYLMG 281 (454)
Q Consensus 203 ~Pvvv~~HGgg~~~g~~~~~~~~~~~la~~G~~Vv~~dyr~~~~~~-~~~~~~D~~~al~~l~~~~~~~g~d~~rI~l~G 281 (454)
.|.++++||.+ |....|..+.+.|. .++.|+.++.++.+... ....+++ ..+.+.+.+..... ..++.++|
T Consensus 1068 ~~~l~~lh~~~---g~~~~~~~l~~~l~-~~~~v~~~~~~g~~~~~~~~~~l~~---la~~~~~~i~~~~~-~~p~~l~G 1139 (1296)
T PRK10252 1068 GPTLFCFHPAS---GFAWQFSVLSRYLD-PQWSIYGIQSPRPDGPMQTATSLDE---VCEAHLATLLEQQP-HGPYHLLG 1139 (1296)
T ss_pred CCCeEEecCCC---CchHHHHHHHHhcC-CCCcEEEEECCCCCCCCCCCCCHHH---HHHHHHHHHHhhCC-CCCEEEEE
Confidence 46789999964 44445566666664 36999999998775431 1122222 22222222222111 24799999
Q ss_pred cCchHHHHHHHHHHH
Q 012898 282 QSAGAHIAACTLLEQ 296 (454)
Q Consensus 282 ~S~GG~la~~~a~~~ 296 (454)
||+||.++..++.+.
T Consensus 1140 ~S~Gg~vA~e~A~~l 1154 (1296)
T PRK10252 1140 YSLGGTLAQGIAARL 1154 (1296)
T ss_pred echhhHHHHHHHHHH
Confidence 999999999998764
No 186
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=94.77 E-value=0.1 Score=48.59 Aligned_cols=60 Identities=18% Similarity=0.139 Sum_probs=44.9
Q ss_pred CcEEEEEecCCCCCCC------------hhHHHHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCchHHHHHHHHHHH
Q 012898 233 DIIVACIDYRNFPQGT------------IKDMVKDASQGISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLLEQ 296 (454)
Q Consensus 233 G~~Vv~~dyr~~~~~~------------~~~~~~D~~~al~~l~~~~~~~g~d~~rI~l~G~S~GG~la~~~a~~~ 296 (454)
-..|++|-||...... ......|+.+|.++-.++.. +-+.++|+|||+|+.+...++.+.
T Consensus 45 ~~~vfAP~YRQatl~~~~~~~~~~~~~a~~~ay~DV~~AF~~yL~~~n----~GRPfILaGHSQGs~~l~~LL~e~ 116 (207)
T PF11288_consen 45 VCNVFAPRYRQATLYAFLDTDREDAEKAFDLAYSDVRAAFDYYLANYN----NGRPFILAGHSQGSMHLLRLLKEE 116 (207)
T ss_pred CCccccChhhcchhhhhhccCcchhHHHHHhhHHHHHHHHHHHHHhcC----CCCCEEEEEeChHHHHHHHHHHHH
Confidence 3788899999643221 23458899999998877742 225799999999999999988764
No 187
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=94.59 E-value=0.61 Score=44.22 Aligned_cols=37 Identities=19% Similarity=0.457 Sum_probs=30.3
Q ss_pred HHHHHHHHHHhhhhcCCCCCcEEEEEcCchHHHHHHHHHH
Q 012898 256 ASQGISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLLE 295 (454)
Q Consensus 256 ~~~al~~l~~~~~~~g~d~~rI~l~G~S~GG~la~~~a~~ 295 (454)
+..|++++.+....++ +.|.+.|||.||++|..++..
T Consensus 68 q~~A~~yl~~~~~~~~---~~i~v~GHSkGGnLA~yaa~~ 104 (224)
T PF11187_consen 68 QKSALAYLKKIAKKYP---GKIYVTGHSKGGNLAQYAAAN 104 (224)
T ss_pred HHHHHHHHHHHHHhCC---CCEEEEEechhhHHHHHHHHH
Confidence 4678888888776543 359999999999999998876
No 188
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=94.45 E-value=0.068 Score=53.89 Aligned_cols=86 Identities=16% Similarity=0.136 Sum_probs=55.9
Q ss_pred EEEEEcCCCccCCcccchhHHHHHHHhCCcE---EEEEecCCCCCCChhHHHHHHHHHHHHHHHhhhhcCCCCCcEEEEE
Q 012898 205 VVAFITGGAWIIGYKAWGSLLGQQLSERDII---VACIDYRNFPQGTIKDMVKDASQGISFVCNNISEYGGDPDRIYLMG 281 (454)
Q Consensus 205 vvv~~HGgg~~~g~~~~~~~~~~~la~~G~~---Vv~~dyr~~~~~~~~~~~~D~~~al~~l~~~~~~~g~d~~rI~l~G 281 (454)
.+|++||.++ ....+..+...++..|+. +..+++... .... ....+.....+++.+.....+. .+|.|+|
T Consensus 61 pivlVhG~~~---~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~~-~~~~~~~ql~~~V~~~l~~~ga--~~v~Lig 133 (336)
T COG1075 61 PIVLVHGLGG---GYGNFLPLDYRLAILGWLTNGVYAFELSGG-DGTY-SLAVRGEQLFAYVDEVLAKTGA--KKVNLIG 133 (336)
T ss_pred eEEEEccCcC---CcchhhhhhhhhcchHHHhccccccccccc-CCCc-cccccHHHHHHHHHHHHhhcCC--CceEEEe
Confidence 6899999643 333444455557777777 777877644 2222 2223445566677766655443 6899999
Q ss_pred cCchHHHHHHHHHHHH
Q 012898 282 QSAGAHIAACTLLEQA 297 (454)
Q Consensus 282 ~S~GG~la~~~a~~~~ 297 (454)
||+||..+..++...+
T Consensus 134 HS~GG~~~ry~~~~~~ 149 (336)
T COG1075 134 HSMGGLDSRYYLGVLG 149 (336)
T ss_pred ecccchhhHHHHhhcC
Confidence 9999999997766543
No 189
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=93.94 E-value=0.2 Score=51.65 Aligned_cols=69 Identities=19% Similarity=0.158 Sum_probs=43.6
Q ss_pred chhHHHHHHHhCCcEE-----EE-EecCCCCCCChhHHHHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCchHHHHHHHHH
Q 012898 221 WGSLLGQQLSERDIIV-----AC-IDYRNFPQGTIKDMVKDASQGISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLL 294 (454)
Q Consensus 221 ~~~~~~~~la~~G~~V-----v~-~dyr~~~~~~~~~~~~D~~~al~~l~~~~~~~g~d~~rI~l~G~S~GG~la~~~a~ 294 (454)
.+..+.+.|.+.||.. .+ +|+|..+. ........+...++.+. + .+.++|.|+||||||.++..++.
T Consensus 66 ~~~~li~~L~~~GY~~~~~l~~~pYDWR~~~~-~~~~~~~~lk~~ie~~~----~--~~~~kv~li~HSmGgl~~~~fl~ 138 (389)
T PF02450_consen 66 YFAKLIENLEKLGYDRGKDLFAAPYDWRLSPA-ERDEYFTKLKQLIEEAY----K--KNGKKVVLIAHSMGGLVARYFLQ 138 (389)
T ss_pred hHHHHHHHHHhcCcccCCEEEEEeechhhchh-hHHHHHHHHHHHHHHHH----H--hcCCcEEEEEeCCCchHHHHHHH
Confidence 5667888998876543 23 68887765 11122222333333222 2 22469999999999999998887
Q ss_pred HH
Q 012898 295 EQ 296 (454)
Q Consensus 295 ~~ 296 (454)
..
T Consensus 139 ~~ 140 (389)
T PF02450_consen 139 WM 140 (389)
T ss_pred hc
Confidence 64
No 190
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=93.88 E-value=0.12 Score=44.55 Aligned_cols=37 Identities=19% Similarity=0.246 Sum_probs=26.8
Q ss_pred HHHHHHHhhhhcCCCCCcEEEEEcCchHHHHHHHHHHHH
Q 012898 259 GISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLLEQA 297 (454)
Q Consensus 259 al~~l~~~~~~~g~d~~rI~l~G~S~GG~la~~~a~~~~ 297 (454)
..+.+.+..+++. ..+|.+.|||+||.+|..++....
T Consensus 50 ~~~~l~~~~~~~~--~~~i~itGHSLGGalA~l~a~~l~ 86 (140)
T PF01764_consen 50 ILDALKELVEKYP--DYSIVITGHSLGGALASLAAADLA 86 (140)
T ss_dssp HHHHHHHHHHHST--TSEEEEEEETHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhccc--CccchhhccchHHHHHHHHHHhhh
Confidence 4445555444433 369999999999999999888643
No 191
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=93.70 E-value=0.76 Score=46.85 Aligned_cols=88 Identities=18% Similarity=0.300 Sum_probs=59.2
Q ss_pred CcEEEEEcCCCccCCcccchh---HHHHHHHh-CCcEEEEEecCCCCCCC-----------------hhHHHHHHHHHHH
Q 012898 203 KPVVAFITGGAWIIGYKAWGS---LLGQQLSE-RDIIVACIDYRNFPQGT-----------------IKDMVKDASQGIS 261 (454)
Q Consensus 203 ~Pvvv~~HGgg~~~g~~~~~~---~~~~~la~-~G~~Vv~~dyr~~~~~~-----------------~~~~~~D~~~al~ 261 (454)
.| |+|.-|. .|+-.++. .+.-.+|. .+..+|.+++|.+|++. ....+.|....++
T Consensus 81 gP-IffYtGN---EGdie~Fa~ntGFm~D~Ap~~~AllVFaEHRyYGeS~PFG~~s~k~~~hlgyLtseQALADfA~ll~ 156 (492)
T KOG2183|consen 81 GP-IFFYTGN---EGDIEWFANNTGFMWDLAPELKALLVFAEHRYYGESLPFGSQSYKDARHLGYLTSEQALADFAELLT 156 (492)
T ss_pred Cc-eEEEeCC---cccHHHHHhccchHHhhhHhhCceEEEeehhccccCCCCcchhccChhhhccccHHHHHHHHHHHHH
Confidence 44 5555563 34433322 23334444 49999999999987752 1234778888888
Q ss_pred HHHHhhhhcCCCCCcEEEEEcCchHHHHHHHHHHHH
Q 012898 262 FVCNNISEYGGDPDRIYLMGQSAGAHIAACTLLEQA 297 (454)
Q Consensus 262 ~l~~~~~~~g~d~~rI~l~G~S~GG~la~~~a~~~~ 297 (454)
.+++.. +-....|+++|-|.||++++++=++++
T Consensus 157 ~lK~~~---~a~~~pvIafGGSYGGMLaAWfRlKYP 189 (492)
T KOG2183|consen 157 FLKRDL---SAEASPVIAFGGSYGGMLAAWFRLKYP 189 (492)
T ss_pred HHhhcc---ccccCcEEEecCchhhHHHHHHHhcCh
Confidence 888763 344568999999999999999877654
No 192
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=93.14 E-value=0.75 Score=41.96 Aligned_cols=89 Identities=19% Similarity=0.216 Sum_probs=43.0
Q ss_pred EEEEEcCCCccCCcccchhHHHHHHHhC-C---cEEEEEecCCCCCC-ChhHHH-HHHHHHHHHHHHhhhhcCCCCCcEE
Q 012898 205 VVAFITGGAWIIGYKAWGSLLGQQLSER-D---IIVACIDYRNFPQG-TIKDMV-KDASQGISFVCNNISEYGGDPDRIY 278 (454)
Q Consensus 205 vvv~~HGgg~~~g~~~~~~~~~~~la~~-G---~~Vv~~dyr~~~~~-~~~~~~-~D~~~al~~l~~~~~~~g~d~~rI~ 278 (454)
.||+..|.+...+.......+.+.+.+. | ..+..++|+-.... .+.... .-...+.+.+.+...+ ....+|+
T Consensus 7 ~vi~aRGT~E~~g~~~~g~~~~~~l~~~~g~~~~~~~~V~YpA~~~~~~y~~S~~~G~~~~~~~i~~~~~~--CP~~kiv 84 (179)
T PF01083_consen 7 HVIFARGTGEPPGVGRVGPPFADALQAQPGGTSVAVQGVEYPASLGPNSYGDSVAAGVANLVRLIEEYAAR--CPNTKIV 84 (179)
T ss_dssp EEEEE--TTSSTTTCCCHHHHHHHHHHHCTTCEEEEEE--S---SCGGSCHHHHHHHHHHHHHHHHHHHHH--STTSEEE
T ss_pred EEEEecCCCCCCCCccccHHHHHHHHhhcCCCeeEEEecCCCCCCCcccccccHHHHHHHHHHHHHHHHHh--CCCCCEE
Confidence 3556666554333322223455566544 4 44555678754333 122211 1122233333332222 3345999
Q ss_pred EEEcCchHHHHHHHHHH
Q 012898 279 LMGQSAGAHIAACTLLE 295 (454)
Q Consensus 279 l~G~S~GG~la~~~a~~ 295 (454)
|+|+|+||.++..++..
T Consensus 85 l~GYSQGA~V~~~~~~~ 101 (179)
T PF01083_consen 85 LAGYSQGAMVVGDALSG 101 (179)
T ss_dssp EEEETHHHHHHHHHHHH
T ss_pred EEecccccHHHHHHHHh
Confidence 99999999999988866
No 193
>COG4287 PqaA PhoPQ-activated pathogenicity-related protein [General function prediction only]
Probab=92.99 E-value=0.86 Score=45.75 Aligned_cols=200 Identities=13% Similarity=0.132 Sum_probs=111.4
Q ss_pred eeEEEEeeCCCCCCCcEEEEEcCCCccCCcccch------hHHHHHHHhC-CcEEEEE-ecCC----C------------
Q 012898 189 NRLDLYFPKSSDGPKPVVAFITGGAWIIGYKAWG------SLLGQQLSER-DIIVACI-DYRN----F------------ 244 (454)
Q Consensus 189 ~~l~vy~P~~~~~~~Pvvv~~HGgg~~~g~~~~~------~~~~~~la~~-G~~Vv~~-dyr~----~------------ 244 (454)
..+.+|+|.+...+...+|+..|+-.-.+....+ .......|++ ...++.+ |.+. +
T Consensus 110 HnV~iyiPd~v~~~~allvvnnG~~~kk~~~~~~~s~d~~~e~la~var~t~tpiisVsDvPNQ~lty~ddg~~lrEDes 189 (507)
T COG4287 110 HNVGIYIPDNVNYKDALLVVNNGTRRKKEGERYYDSFDLDVEELAWVARETETPIISVSDVPNQYLTYQDDGKPLREDES 189 (507)
T ss_pred hcceEEccCCcChhceEEEEecCcccCCCCccccCCccCCHHHHHHHHHhccCceEEeccCCCcceeeccCCccccchHH
Confidence 4688999998666666777777765433222111 1233444544 3333333 4332 1
Q ss_pred -----------CC--CChh---HHHHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCchHHHHHHHHHHHHHhhhCCCCC--
Q 012898 245 -----------PQ--GTIK---DMVKDASQGISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLLEQAIKETGEGES-- 306 (454)
Q Consensus 245 -----------~~--~~~~---~~~~D~~~al~~l~~~~~~~g~d~~rI~l~G~S~GG~la~~~a~~~~~~~~~~~~~-- 306 (454)
++ ...| .++--+..|++..++.+..+.+ ++..+.|-|=-|+.++..|...+......+..
T Consensus 190 Va~SwslFmeaPeqr~~lPL~VPMv~a~srAMdlAq~eL~q~~I--k~F~VTGaSKRgWttwLTAIaDprv~aIvp~v~D 267 (507)
T COG4287 190 VAHSWSLFMEAPEQRPFLPLLVPMVYAVSRAMDLAQDELEQVEI--KGFMVTGASKRGWTTWLTAIADPRVFAIVPFVYD 267 (507)
T ss_pred HHHHHHHHhcCcccccCcccccHHHHHHHHHHHHHHhhhhheee--eeEEEeccccchHHHHHHHhcCcchhhhhhhHHh
Confidence 11 0011 1344567788888888777555 58999999999999998876543322211100
Q ss_pred cccchhhhhhhccccCCCCC-------Chh------------hhhcCCcccccCCCccccccCCCCCEEEEEeCCCCCCC
Q 012898 307 TTWSVSQIRAYFGLSGGIMD-------GEE------------SLRQYSPEVLVQDPNTRHAVSLLPPIILFHGTADYSIP 367 (454)
Q Consensus 307 ~~~~~~~i~~~~~~~g~~~~-------~~~------------~~~~~~p~~~~~~~~~~~~~~~~pPvLiihGe~D~~Vp 367 (454)
..-....+.....-+|+.+. .+. ..+..+|..+.. .....+..-|-.|+.+..|+..+
T Consensus 268 ~Lni~a~L~hiyrsYGgnwpi~l~pyyaegi~erl~tp~fkqL~~IiDPlay~~---try~~RLalpKyivnaSgDdff~ 344 (507)
T COG4287 268 NLNIEAQLLHIYRSYGGNWPIKLAPYYAEGIDERLETPLFKQLLEIIDPLAYRN---TRYQLRLALPKYIVNASGDDFFV 344 (507)
T ss_pred hcccHHHHHHHHHhhCCCCCcccchhHhhhHHHhhcCHHHHHHHHhhcHHHHhh---hhhhhhccccceeecccCCcccC
Confidence 01112223333333332111 000 111111111111 01223344588999999999999
Q ss_pred hHHHHHHHHHHHHcCCCEEEEEeCCCCcc
Q 012898 368 ADASKNFANTLQRVGVRAESILYEGKTHT 396 (454)
Q Consensus 368 ~~~s~~l~~~l~~~g~~vel~~~~g~~H~ 396 (454)
++.+.-+++.|.. ..-+...|+..|.
T Consensus 345 pDsa~lYyd~LPG---~kaLrmvPN~~H~ 370 (507)
T COG4287 345 PDSANLYYDDLPG---EKALRMVPNDPHN 370 (507)
T ss_pred CCccceeeccCCC---ceeeeeCCCCcch
Confidence 9999999998874 6788999999998
No 194
>PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children. Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A.
Probab=92.81 E-value=0.32 Score=47.45 Aligned_cols=96 Identities=15% Similarity=0.169 Sum_probs=40.5
Q ss_pred CCCcEEEEEcCCCccCCcccchhHHHHHHHhC--CcEEEEEecCCCCC-CChhHHHHHHHHHHHHHHHhhhhcCCCCCcE
Q 012898 201 GPKPVVAFITGGAWIIGYKAWGSLLGQQLSER--DIIVACIDYRNFPQ-GTIKDMVKDASQGISFVCNNISEYGGDPDRI 277 (454)
Q Consensus 201 ~~~Pvvv~~HGgg~~~g~~~~~~~~~~~la~~--G~~Vv~~dyr~~~~-~~~~~~~~D~~~al~~l~~~~~~~g~d~~rI 277 (454)
..+| ||+.||-|-...+...+..+...+.+. |..|.+++.-.... ........++...++.+++.++.-.-=.+-+
T Consensus 4 ~~~P-vViwHGmGD~~~~~~~m~~i~~~i~~~~PG~yV~si~ig~~~~~D~~~s~f~~v~~Qv~~vc~~l~~~p~L~~G~ 82 (279)
T PF02089_consen 4 SPLP-VVIWHGMGDSCCNPSSMGSIKELIEEQHPGTYVHSIEIGNDPSEDVENSFFGNVNDQVEQVCEQLANDPELANGF 82 (279)
T ss_dssp SS---EEEE--TT--S--TTTHHHHHHHHHHHSTT--EEE--SSSSHHHHHHHHHHSHHHHHHHHHHHHHHH-GGGTT-E
T ss_pred CCCc-EEEEEcCccccCChhHHHHHHHHHHHhCCCceEEEEEECCCcchhhhhhHHHHHHHHHHHHHHHHhhChhhhcce
Confidence 3455 555699552222222334344444433 88888776532111 0112222333344444444332210001469
Q ss_pred EEEEcCchHHHHHHHHHHHH
Q 012898 278 YLMGQSAGAHIAACTLLEQA 297 (454)
Q Consensus 278 ~l~G~S~GG~la~~~a~~~~ 297 (454)
.++|+|.||.++-.++.+..
T Consensus 83 ~~IGfSQGgl~lRa~vq~c~ 102 (279)
T PF02089_consen 83 NAIGFSQGGLFLRAYVQRCN 102 (279)
T ss_dssp EEEEETCHHHHHHHHHHH-T
T ss_pred eeeeeccccHHHHHHHHHCC
Confidence 99999999999988877643
No 195
>KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=92.30 E-value=1.1 Score=43.22 Aligned_cols=87 Identities=17% Similarity=0.089 Sum_probs=51.4
Q ss_pred CcEEEEEcCCCccCCcccchhHHHHHHHhC-CcEEEEEecCCCCCCCh-hHHHHHHHHHHHHHHHhhhhcCCCCCcEEEE
Q 012898 203 KPVVAFITGGAWIIGYKAWGSLLGQQLSER-DIIVACIDYRNFPQGTI-KDMVKDASQGISFVCNNISEYGGDPDRIYLM 280 (454)
Q Consensus 203 ~Pvvv~~HGgg~~~g~~~~~~~~~~~la~~-G~~Vv~~dyr~~~~~~~-~~~~~D~~~al~~l~~~~~~~g~d~~rI~l~ 280 (454)
.| +|.+||-|-...+ .....+.+.+.+. |..|.+.+.-.+-+..+ ....+.+..+.+.+.. -.+ -++-+.++
T Consensus 24 ~P-~ii~HGigd~c~~-~~~~~~~q~l~~~~g~~v~~leig~g~~~s~l~pl~~Qv~~~ce~v~~-m~~---lsqGyniv 97 (296)
T KOG2541|consen 24 VP-VIVWHGIGDSCSS-LSMANLTQLLEELPGSPVYCLEIGDGIKDSSLMPLWEQVDVACEKVKQ-MPE---LSQGYNIV 97 (296)
T ss_pred CC-EEEEeccCccccc-chHHHHHHHHHhCCCCeeEEEEecCCcchhhhccHHHHHHHHHHHHhc-chh---ccCceEEE
Confidence 45 5566995422222 3356677888877 99999999754422222 2222223334444442 222 23468999
Q ss_pred EcCchHHHHHHHHHH
Q 012898 281 GQSAGAHIAACTLLE 295 (454)
Q Consensus 281 G~S~GG~la~~~a~~ 295 (454)
|.|.||.++-.++..
T Consensus 98 g~SQGglv~Raliq~ 112 (296)
T KOG2541|consen 98 GYSQGGLVARALIQF 112 (296)
T ss_pred EEccccHHHHHHHHh
Confidence 999999998776654
No 196
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=92.16 E-value=0.4 Score=42.15 Aligned_cols=24 Identities=25% Similarity=0.308 Sum_probs=20.9
Q ss_pred CCCcEEEEEcCchHHHHHHHHHHH
Q 012898 273 DPDRIYLMGQSAGAHIAACTLLEQ 296 (454)
Q Consensus 273 d~~rI~l~G~S~GG~la~~~a~~~ 296 (454)
...+|.+.|||+||++|..++...
T Consensus 26 p~~~i~v~GHSlGg~lA~l~a~~~ 49 (153)
T cd00741 26 PDYKIHVTGHSLGGALAGLAGLDL 49 (153)
T ss_pred CCCeEEEEEcCHHHHHHHHHHHHH
Confidence 456999999999999999988764
No 197
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=90.96 E-value=1 Score=48.28 Aligned_cols=96 Identities=18% Similarity=0.254 Sum_probs=52.9
Q ss_pred hHHHHHHHhCCcE-----EEEEecCCCCCCCh--hHHHHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCchHHHHHHHHHH
Q 012898 223 SLLGQQLSERDII-----VACIDYRNFPQGTI--KDMVKDASQGISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLLE 295 (454)
Q Consensus 223 ~~~~~~la~~G~~-----Vv~~dyr~~~~~~~--~~~~~D~~~al~~l~~~~~~~g~d~~rI~l~G~S~GG~la~~~a~~ 295 (454)
..+.+.|++.||. .+.+|+|+.+...- ...+..+...++.+.+. .. .++|+|+||||||.++..++..
T Consensus 159 ~kLIe~L~~iGY~~~nL~gAPYDWRls~~~le~rd~YF~rLK~lIE~ay~~----ng-gkKVVLV~HSMGglv~lyFL~w 233 (642)
T PLN02517 159 AVLIANLARIGYEEKNMYMAAYDWRLSFQNTEVRDQTLSRLKSNIELMVAT----NG-GKKVVVVPHSMGVLYFLHFMKW 233 (642)
T ss_pred HHHHHHHHHcCCCCCceeecccccccCccchhhhhHHHHHHHHHHHHHHHH----cC-CCeEEEEEeCCchHHHHHHHHh
Confidence 5688999988875 33456665532211 11222233333333221 11 3589999999999999988753
Q ss_pred HHHh-hhCCCCCcccchhhhhhhccccCC
Q 012898 296 QAIK-ETGEGESTTWSVSQIRAYFGLSGG 323 (454)
Q Consensus 296 ~~~~-~~~~~~~~~~~~~~i~~~~~~~g~ 323 (454)
.... ...+.....|....++.++.+++.
T Consensus 234 v~~~~~~gG~gG~~W~dKyI~s~I~Iagp 262 (642)
T PLN02517 234 VEAPAPMGGGGGPGWCAKHIKAVMNIGGP 262 (642)
T ss_pred ccccccccCCcchHHHHHHHHHheecccc
Confidence 1100 111222344555667777766664
No 198
>KOG3967 consensus Uncharacterized conserved protein [Function unknown]
Probab=90.72 E-value=1.6 Score=40.68 Aligned_cols=92 Identities=16% Similarity=0.242 Sum_probs=52.3
Q ss_pred CCCcEEEEEcCCCccCC-ccc------------chhHHHHHHHhCCcEEEEEecCC----C-----CCCChhHHHHHHHH
Q 012898 201 GPKPVVAFITGGAWIIG-YKA------------WGSLLGQQLSERDIIVACIDYRN----F-----PQGTIKDMVKDASQ 258 (454)
Q Consensus 201 ~~~Pvvv~~HGgg~~~g-~~~------------~~~~~~~~la~~G~~Vv~~dyr~----~-----~~~~~~~~~~D~~~ 258 (454)
.+..++|++||.|.+.. .+. ..-++.++..+.||.|++.+--- + +.-.....++.+.
T Consensus 99 ~~~kLlVLIHGSGvVrAGQWARrLIIN~~Ld~GTQiPyi~rAv~~Gygviv~N~N~~~kfye~k~np~kyirt~veh~~- 177 (297)
T KOG3967|consen 99 NPQKLLVLIHGSGVVRAGQWARRLIINEDLDSGTQIPYIKRAVAEGYGVIVLNPNRERKFYEKKRNPQKYIRTPVEHAK- 177 (297)
T ss_pred CccceEEEEecCceEecchHhhhhhhccccccCCcChHHHHHHHcCCcEEEeCCchhhhhhhcccCcchhccchHHHHH-
Confidence 34558999999885432 110 11134555566688888776431 1 1111122233222
Q ss_pred HHHHHHHhhhhcCCCCCcEEEEEcCchHHHHHHHHHHHH
Q 012898 259 GISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLLEQA 297 (454)
Q Consensus 259 al~~l~~~~~~~g~d~~rI~l~G~S~GG~la~~~a~~~~ 297 (454)
++-.++- +...+..|+++.||.||.+.+.+..+.+
T Consensus 178 ---yvw~~~v-~pa~~~sv~vvahsyGG~~t~~l~~~f~ 212 (297)
T KOG3967|consen 178 ---YVWKNIV-LPAKAESVFVVAHSYGGSLTLDLVERFP 212 (297)
T ss_pred ---HHHHHHh-cccCcceEEEEEeccCChhHHHHHHhcC
Confidence 2222221 1245678999999999999998887643
No 199
>PLN02408 phospholipase A1
Probab=90.34 E-value=0.43 Score=48.35 Aligned_cols=36 Identities=25% Similarity=0.441 Sum_probs=26.0
Q ss_pred HHHHHhhhhcCCCCCcEEEEEcCchHHHHHHHHHHH
Q 012898 261 SFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLLEQ 296 (454)
Q Consensus 261 ~~l~~~~~~~g~d~~rI~l~G~S~GG~la~~~a~~~ 296 (454)
+-|++.+++++..+.+|.+.|||+||.+|..++..-
T Consensus 186 ~eI~~ll~~y~~~~~sI~vTGHSLGGALAtLaA~dl 221 (365)
T PLN02408 186 EEIARLLQSYGDEPLSLTITGHSLGAALATLTAYDI 221 (365)
T ss_pred HHHHHHHHhcCCCCceEEEeccchHHHHHHHHHHHH
Confidence 334444455544445799999999999999988764
No 200
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=90.28 E-value=2 Score=44.02 Aligned_cols=62 Identities=11% Similarity=0.242 Sum_probs=43.1
Q ss_pred CCEEEEEeCCCCCCChHHHHHHHHHHHHcC----------------------CCEEEEEeCCCCccccccCCCCCCcHHH
Q 012898 353 PPIILFHGTADYSIPADASKNFANTLQRVG----------------------VRAESILYEGKTHTDLFLQDPMRGGKDD 410 (454)
Q Consensus 353 pPvLiihGe~D~~Vp~~~s~~l~~~l~~~g----------------------~~vel~~~~g~~H~~~~l~~p~~~~~~~ 410 (454)
.++||.+|+.|.+||.-.++.+.+.|.-.+ .+..+..+.++||. +....| +.
T Consensus 331 irVLiy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~f~~~~~~~~~~~~G~~k~~~~ltf~~V~~AGHm-vP~dqP-----~~ 404 (415)
T PF00450_consen 331 IRVLIYNGDLDLICNFLGTERWIDNLNWSGKDGFRQWPRKVNGQVAGYVKQYGNLTFVTVRGAGHM-VPQDQP-----EA 404 (415)
T ss_dssp -EEEEEEETT-SSS-HHHHHHHHHCTECTEEEEEEEEEEETTCSEEEEEEEETTEEEEEETT--SS-HHHHSH-----HH
T ss_pred ceeEEeccCCCEEEEeccchhhhhccccCcccccccccccccccccceeEEeccEEEEEEcCCccc-ChhhCH-----HH
Confidence 599999999999999999999998874221 13678899999998 544444 66
Q ss_pred HHHHHHHHHH
Q 012898 411 MFEDIVAIIH 420 (454)
Q Consensus 411 ~~~~i~~Fl~ 420 (454)
.++-+-+||+
T Consensus 405 a~~m~~~fl~ 414 (415)
T PF00450_consen 405 ALQMFRRFLK 414 (415)
T ss_dssp HHHHHHHHHC
T ss_pred HHHHHHHHhc
Confidence 6677777775
No 201
>PLN02454 triacylglycerol lipase
Probab=89.90 E-value=0.52 Score=48.48 Aligned_cols=35 Identities=23% Similarity=0.320 Sum_probs=23.8
Q ss_pred HHHHhhhhcCCCCCcEEEEEcCchHHHHHHHHHHH
Q 012898 262 FVCNNISEYGGDPDRIYLMGQSAGAHIAACTLLEQ 296 (454)
Q Consensus 262 ~l~~~~~~~g~d~~rI~l~G~S~GG~la~~~a~~~ 296 (454)
.|++..+++....-+|++.|||+||.+|..+|..-
T Consensus 215 ~V~~l~~~Yp~~~~sI~vTGHSLGGALAtLaA~di 249 (414)
T PLN02454 215 KIKELLERYKDEKLSIVLTGHSLGASLATLAAFDI 249 (414)
T ss_pred HHHHHHHhCCCCCceEEEEecCHHHHHHHHHHHHH
Confidence 33333344432222599999999999999988763
No 202
>PLN02761 lipase class 3 family protein
Probab=89.77 E-value=1.7 Score=45.89 Aligned_cols=37 Identities=27% Similarity=0.374 Sum_probs=25.5
Q ss_pred HHHHHHhhhhcC----CCCCcEEEEEcCchHHHHHHHHHHH
Q 012898 260 ISFVCNNISEYG----GDPDRIYLMGQSAGAHIAACTLLEQ 296 (454)
Q Consensus 260 l~~l~~~~~~~g----~d~~rI~l~G~S~GG~la~~~a~~~ 296 (454)
++.|++.+..++ ....+|.+.|||+||.+|...+..-
T Consensus 275 l~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA~DI 315 (527)
T PLN02761 275 LAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSAYDI 315 (527)
T ss_pred HHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHHHHH
Confidence 444444444442 2334899999999999999988753
No 203
>PF10605 3HBOH: 3HB-oligomer hydrolase (3HBOH) ; InterPro: IPR016582 This entry represents a group of predicted D-(-)-3-hydroxybutyrate oligomer hydrolases (also known as 3HB-oligomer hydrolase), which function in the degradation of poly-3-hydroxybutyrate (PHB). These enzymes catalyse the hydrolysis of D(-)-3-hydroxybutyrate oligomers (3HB-oligomers) into 3HB-monomers [, ].; GO: 0047989 hydroxybutyrate-dimer hydrolase activity, 0019605 butyrate metabolic process, 0005615 extracellular space
Probab=89.73 E-value=0.52 Score=50.17 Aligned_cols=72 Identities=22% Similarity=0.268 Sum_probs=51.5
Q ss_pred CCEEEEEeCCCCCCChHHHHHHHHHHHH--cCC--CEEEEEeCCCCccccccCCC--------CCCcHHHHHHHHHHHHH
Q 012898 353 PPIILFHGTADYSIPADASKNFANTLQR--VGV--RAESILYEGKTHTDLFLQDP--------MRGGKDDMFEDIVAIIH 420 (454)
Q Consensus 353 pPvLiihGe~D~~Vp~~~s~~l~~~l~~--~g~--~vel~~~~g~~H~~~~l~~p--------~~~~~~~~~~~i~~Fl~ 420 (454)
.|.+|+||..|.++|..++-+-|-.+.+ .|. ...+++++++.|.+-|+.-| ......+.++.|.++|+
T Consensus 556 KPaIiVhGR~DaLlPvnh~Sr~Y~~ln~~~eG~~s~lrYyeV~naqHfDaf~~~pG~~~r~VPlh~Y~~qALd~M~a~L~ 635 (690)
T PF10605_consen 556 KPAIIVHGRSDALLPVNHTSRPYLGLNRQVEGRASRLRYYEVTNAQHFDAFLDFPGFDTRFVPLHPYFFQALDLMWAHLK 635 (690)
T ss_pred CceEEEecccceecccCCCchHHHHHhhhhcccccceeEEEecCCeechhhccCCCCCcccccccHHHHHHHHHHHHHhh
Confidence 4999999999999999765555544432 243 68999999999998876533 33334666777777777
Q ss_pred hcCh
Q 012898 421 ADDQ 424 (454)
Q Consensus 421 ~~~~ 424 (454)
....
T Consensus 636 ~G~~ 639 (690)
T PF10605_consen 636 SGAA 639 (690)
T ss_pred cCCC
Confidence 6543
No 204
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=89.21 E-value=1.2 Score=46.26 Aligned_cols=72 Identities=17% Similarity=0.111 Sum_probs=42.7
Q ss_pred chhHHHHHHHhCCcE------EEEEecCCCCCCC--hhHHHHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCchHHHHHHH
Q 012898 221 WGSLLGQQLSERDII------VACIDYRNFPQGT--IKDMVKDASQGISFVCNNISEYGGDPDRIYLMGQSAGAHIAACT 292 (454)
Q Consensus 221 ~~~~~~~~la~~G~~------Vv~~dyr~~~~~~--~~~~~~D~~~al~~l~~~~~~~g~d~~rI~l~G~S~GG~la~~~ 292 (454)
.+..+.+.|+.-||. -+.+|+|+..... ....+.....-++.+.+ ..|. ++|+|++||||+.+..++
T Consensus 125 ~w~~~i~~lv~~GYe~~~~l~ga~YDwRls~~~~e~rd~yl~kLK~~iE~~~~---~~G~--kkVvlisHSMG~l~~lyF 199 (473)
T KOG2369|consen 125 YWHELIENLVGIGYERGKTLFGAPYDWRLSYHNSEERDQYLSKLKKKIETMYK---LNGG--KKVVLISHSMGGLYVLYF 199 (473)
T ss_pred HHHHHHHHHHhhCcccCceeeccccchhhccCChhHHHHHHHHHHHHHHHHHH---HcCC--CceEEEecCCccHHHHHH
Confidence 345577778887876 4456778754221 11122222223332222 2222 589999999999999999
Q ss_pred HHHHH
Q 012898 293 LLEQA 297 (454)
Q Consensus 293 a~~~~ 297 (454)
+....
T Consensus 200 l~w~~ 204 (473)
T KOG2369|consen 200 LKWVE 204 (473)
T ss_pred Hhccc
Confidence 87643
No 205
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=88.72 E-value=0.91 Score=42.79 Aligned_cols=23 Identities=26% Similarity=0.381 Sum_probs=20.1
Q ss_pred CCcEEEEEcCchHHHHHHHHHHH
Q 012898 274 PDRIYLMGQSAGAHIAACTLLEQ 296 (454)
Q Consensus 274 ~~rI~l~G~S~GG~la~~~a~~~ 296 (454)
..+|.+.|||+||.+|..++..-
T Consensus 127 ~~~i~vtGHSLGGaiA~l~a~~l 149 (229)
T cd00519 127 DYKIIVTGHSLGGALASLLALDL 149 (229)
T ss_pred CceEEEEccCHHHHHHHHHHHHH
Confidence 45899999999999999888764
No 206
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=88.64 E-value=4.4 Score=42.42 Aligned_cols=88 Identities=18% Similarity=0.106 Sum_probs=56.4
Q ss_pred CCCcEEEEEcCCCccCCcccchhHHHHHHHhCCcEEEEE-ecCCCCCCCh--hHHHHHHHHHHHHHHHhhhhcCCCCCcE
Q 012898 201 GPKPVVAFITGGAWIIGYKAWGSLLGQQLSERDIIVACI-DYRNFPQGTI--KDMVKDASQGISFVCNNISEYGGDPDRI 277 (454)
Q Consensus 201 ~~~Pvvv~~HGgg~~~g~~~~~~~~~~~la~~G~~Vv~~-dyr~~~~~~~--~~~~~D~~~al~~l~~~~~~~g~d~~rI 277 (454)
-+-|+.|||-|--...|... . -.+.+.|.-.+.+ |-|+-+.... .+.+ -...++-+++.++.+|.+.+.+
T Consensus 287 ~KPPL~VYFSGyR~aEGFEg--y---~MMk~Lg~PfLL~~DpRleGGaFYlGs~ey--E~~I~~~I~~~L~~LgF~~~qL 359 (511)
T TIGR03712 287 FKPPLNVYFSGYRPAEGFEG--Y---FMMKRLGAPFLLIGDPRLEGGAFYLGSDEY--EQGIINVIQEKLDYLGFDHDQL 359 (511)
T ss_pred CCCCeEEeeccCcccCcchh--H---HHHHhcCCCeEEeeccccccceeeeCcHHH--HHHHHHHHHHHHHHhCCCHHHe
Confidence 45589999988321112111 1 2223336555444 7777655443 2222 2345566777788889999999
Q ss_pred EEEEcCchHHHHHHHHHH
Q 012898 278 YLMGQSAGAHIAACTLLE 295 (454)
Q Consensus 278 ~l~G~S~GG~la~~~a~~ 295 (454)
+|.|-|||..-|+.+++.
T Consensus 360 ILSGlSMGTfgAlYYga~ 377 (511)
T TIGR03712 360 ILSGLSMGTFGALYYGAK 377 (511)
T ss_pred eeccccccchhhhhhccc
Confidence 999999999999998875
No 207
>PLN02571 triacylglycerol lipase
Probab=88.17 E-value=0.75 Score=47.36 Aligned_cols=21 Identities=29% Similarity=0.430 Sum_probs=19.0
Q ss_pred cEEEEEcCchHHHHHHHHHHH
Q 012898 276 RIYLMGQSAGAHIAACTLLEQ 296 (454)
Q Consensus 276 rI~l~G~S~GG~la~~~a~~~ 296 (454)
+|++.|||+||.+|..+|..-
T Consensus 227 sI~VTGHSLGGALAtLaA~dl 247 (413)
T PLN02571 227 SITICGHSLGAALATLNAVDI 247 (413)
T ss_pred cEEEeccchHHHHHHHHHHHH
Confidence 799999999999999988764
No 208
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=87.72 E-value=1.7 Score=39.23 Aligned_cols=74 Identities=15% Similarity=0.107 Sum_probs=43.1
Q ss_pred cccchhHHHHHHHhCCcEEEEEecCCCCCCC-hhHHHHHHHH-HHHHHHHhhhhcCCCCCcEEEEEcCchHHHHHHHHHH
Q 012898 218 YKAWGSLLGQQLSERDIIVACIDYRNFPQGT-IKDMVKDASQ-GISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLLE 295 (454)
Q Consensus 218 ~~~~~~~~~~~la~~G~~Vv~~dyr~~~~~~-~~~~~~D~~~-al~~l~~~~~~~g~d~~rI~l~G~S~GG~la~~~a~~ 295 (454)
....+..+...+.. ++.|+.+++++.+... ....+.+... ..+.+.+. ....++.++|||+||.++...+.+
T Consensus 11 ~~~~~~~~~~~l~~-~~~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~-----~~~~~~~l~g~s~Gg~~a~~~a~~ 84 (212)
T smart00824 11 GPHEYARLAAALRG-RRDVSALPLPGFGPGEPLPASADALVEAQAEAVLRA-----AGGRPFVLVGHSSGGLLAHAVAAR 84 (212)
T ss_pred cHHHHHHHHHhcCC-CccEEEecCCCCCCCCCCCCCHHHHHHHHHHHHHHh-----cCCCCeEEEEECHHHHHHHHHHHH
Confidence 33445556666654 5888999988765432 2222222221 22222221 123479999999999999888775
Q ss_pred HH
Q 012898 296 QA 297 (454)
Q Consensus 296 ~~ 297 (454)
..
T Consensus 85 l~ 86 (212)
T smart00824 85 LE 86 (212)
T ss_pred HH
Confidence 43
No 209
>PLN02802 triacylglycerol lipase
Probab=87.63 E-value=0.82 Score=48.04 Aligned_cols=37 Identities=27% Similarity=0.298 Sum_probs=26.0
Q ss_pred HHHHHHhhhhcCCCCCcEEEEEcCchHHHHHHHHHHH
Q 012898 260 ISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLLEQ 296 (454)
Q Consensus 260 l~~l~~~~~~~g~d~~rI~l~G~S~GG~la~~~a~~~ 296 (454)
++-|++..+++....-+|+|.|||+||.+|..++..-
T Consensus 315 l~eV~~Ll~~Y~~e~~sI~VTGHSLGGALAtLaA~dL 351 (509)
T PLN02802 315 VGEVRRLMEKYKGEELSITVTGHSLGAALALLVADEL 351 (509)
T ss_pred HHHHHHHHHhCCCCcceEEEeccchHHHHHHHHHHHH
Confidence 3344444445543334799999999999999988753
No 210
>PLN02324 triacylglycerol lipase
Probab=87.44 E-value=0.89 Score=46.79 Aligned_cols=22 Identities=23% Similarity=0.270 Sum_probs=19.4
Q ss_pred CcEEEEEcCchHHHHHHHHHHH
Q 012898 275 DRIYLMGQSAGAHIAACTLLEQ 296 (454)
Q Consensus 275 ~rI~l~G~S~GG~la~~~a~~~ 296 (454)
-+|.+.|||+||.+|..+|..-
T Consensus 215 ~sItvTGHSLGGALAtLaA~dl 236 (415)
T PLN02324 215 ISITFTGHSLGAVMSVLSAADL 236 (415)
T ss_pred ceEEEecCcHHHHHHHHHHHHH
Confidence 4799999999999999988753
No 211
>PF03283 PAE: Pectinacetylesterase
Probab=86.27 E-value=4.4 Score=41.32 Aligned_cols=40 Identities=18% Similarity=0.058 Sum_probs=31.3
Q ss_pred HHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCchHHHHHHHHHH
Q 012898 253 VKDASQGISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLLE 295 (454)
Q Consensus 253 ~~D~~~al~~l~~~~~~~g~d~~rI~l~G~S~GG~la~~~a~~ 295 (454)
...+.++++|+.++ .+ .++++|.|.|.|+||.-+...+-.
T Consensus 137 ~~i~~avl~~l~~~--gl-~~a~~vlltG~SAGG~g~~~~~d~ 176 (361)
T PF03283_consen 137 YRILRAVLDDLLSN--GL-PNAKQVLLTGCSAGGLGAILHADY 176 (361)
T ss_pred HHHHHHHHHHHHHh--cC-cccceEEEeccChHHHHHHHHHHH
Confidence 55677889998887 11 356899999999999999876644
No 212
>PLN02753 triacylglycerol lipase
Probab=86.19 E-value=1.1 Score=47.33 Aligned_cols=38 Identities=24% Similarity=0.242 Sum_probs=26.9
Q ss_pred HHHHHHHhhhhcCCC---CCcEEEEEcCchHHHHHHHHHHH
Q 012898 259 GISFVCNNISEYGGD---PDRIYLMGQSAGAHIAACTLLEQ 296 (454)
Q Consensus 259 al~~l~~~~~~~g~d---~~rI~l~G~S~GG~la~~~a~~~ 296 (454)
.+..|++.+.++..+ .-+|.+.|||+||.+|..+|..-
T Consensus 293 Vl~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~Dl 333 (531)
T PLN02753 293 ILTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAYDI 333 (531)
T ss_pred HHHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHHHH
Confidence 344455555555332 35899999999999999988753
No 213
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=85.26 E-value=2.5 Score=44.26 Aligned_cols=45 Identities=20% Similarity=0.234 Sum_probs=35.0
Q ss_pred HHHHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCchHHHHHHHHHH
Q 012898 251 DMVKDASQGISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLLE 295 (454)
Q Consensus 251 ~~~~D~~~al~~l~~~~~~~g~d~~rI~l~G~S~GG~la~~~a~~ 295 (454)
..-.|+....+.+.+...+++-..++.+|+|.|.||+-+..+|..
T Consensus 174 ~~~~D~~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~ 218 (498)
T COG2939 174 GAGKDVYSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHE 218 (498)
T ss_pred ccchhHHHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHHH
Confidence 346688888888887776665555689999999999998777654
No 214
>PLN02310 triacylglycerol lipase
Probab=84.86 E-value=1.4 Score=45.33 Aligned_cols=21 Identities=24% Similarity=0.311 Sum_probs=18.9
Q ss_pred CcEEEEEcCchHHHHHHHHHH
Q 012898 275 DRIYLMGQSAGAHIAACTLLE 295 (454)
Q Consensus 275 ~rI~l~G~S~GG~la~~~a~~ 295 (454)
-+|.|.|||+||.+|..++..
T Consensus 209 ~sI~vTGHSLGGALAtLaA~d 229 (405)
T PLN02310 209 VSLTVTGHSLGGALALLNAYE 229 (405)
T ss_pred ceEEEEcccHHHHHHHHHHHH
Confidence 489999999999999988865
No 215
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=84.42 E-value=2.9 Score=43.69 Aligned_cols=63 Identities=16% Similarity=0.210 Sum_probs=48.0
Q ss_pred CCEEEEEeCCCCCCChHHHHHHHHHHHHcC--------------------CC-EEEEEeCCCCccccccCCCCCCcHHHH
Q 012898 353 PPIILFHGTADYSIPADASKNFANTLQRVG--------------------VR-AESILYEGKTHTDLFLQDPMRGGKDDM 411 (454)
Q Consensus 353 pPvLiihGe~D~~Vp~~~s~~l~~~l~~~g--------------------~~-vel~~~~g~~H~~~~l~~p~~~~~~~~ 411 (454)
-++||..|+.|.+||.-..+.+.+.|+-.+ .+ .++..+.++||. .. ..| +..
T Consensus 348 irVLiY~Gd~D~icn~~Gt~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~n~ltfv~V~~AGHm-Vp-~qP-----~~a 420 (433)
T PLN03016 348 YRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHT-AE-YRP-----NET 420 (433)
T ss_pred ceEEEEECCccccCCcHhHHHHHHhCCCCCCCCcccccCCCEeeeEEEEeCCceEEEEEcCCCCC-CC-CCH-----HHH
Confidence 489999999999999999999998885221 12 667788899997 32 233 677
Q ss_pred HHHHHHHHHhc
Q 012898 412 FEDIVAIIHAD 422 (454)
Q Consensus 412 ~~~i~~Fl~~~ 422 (454)
++-+-+||+.+
T Consensus 421 l~m~~~Fi~~~ 431 (433)
T PLN03016 421 FIMFQRWISGQ 431 (433)
T ss_pred HHHHHHHHcCC
Confidence 77788888754
No 216
>PLN02606 palmitoyl-protein thioesterase
Probab=83.64 E-value=6 Score=39.12 Aligned_cols=91 Identities=15% Similarity=0.091 Sum_probs=46.0
Q ss_pred CCcEEEEEcCCCccCCcccchhHHHHHHHhC-CcEEEEEecCCCC-CCChhHHHHHHHHHHHHHHHhhhhcCCCCCcEEE
Q 012898 202 PKPVVAFITGGAWIIGYKAWGSLLGQQLSER-DIIVACIDYRNFP-QGTIKDMVKDASQGISFVCNNISEYGGDPDRIYL 279 (454)
Q Consensus 202 ~~Pvvv~~HGgg~~~g~~~~~~~~~~~la~~-G~~Vv~~dyr~~~-~~~~~~~~~D~~~al~~l~~~~~~~g~d~~rI~l 279 (454)
+.| ||+.||-|-..+ ......+.+.+.+. |.-+.++..-..- .+.+-...+.+..+.+-|.+ ..+. .+-+.+
T Consensus 26 ~~P-vViwHGlgD~~~-~~~~~~~~~~i~~~~~~pg~~v~ig~~~~~s~~~~~~~Qv~~vce~l~~-~~~L---~~G~na 99 (306)
T PLN02606 26 SVP-FVLFHGFGGECS-NGKVSNLTQFLINHSGYPGTCVEIGNGVQDSLFMPLRQQASIACEKIKQ-MKEL---SEGYNI 99 (306)
T ss_pred CCC-EEEECCCCcccC-CchHHHHHHHHHhCCCCCeEEEEECCCcccccccCHHHHHHHHHHHHhc-chhh---cCceEE
Confidence 455 556699652222 22445566666433 6555444321111 11112222223333333333 2221 135889
Q ss_pred EEcCchHHHHHHHHHHHHH
Q 012898 280 MGQSAGAHIAACTLLEQAI 298 (454)
Q Consensus 280 ~G~S~GG~la~~~a~~~~~ 298 (454)
+|+|.||.++-.++.+.+.
T Consensus 100 IGfSQGglflRa~ierc~~ 118 (306)
T PLN02606 100 VAESQGNLVARGLIEFCDN 118 (306)
T ss_pred EEEcchhHHHHHHHHHCCC
Confidence 9999999999888877543
No 217
>PLN02719 triacylglycerol lipase
Probab=83.37 E-value=1.8 Score=45.66 Aligned_cols=37 Identities=24% Similarity=0.404 Sum_probs=25.5
Q ss_pred HHHHHHhhhhcC---CCCCcEEEEEcCchHHHHHHHHHHH
Q 012898 260 ISFVCNNISEYG---GDPDRIYLMGQSAGAHIAACTLLEQ 296 (454)
Q Consensus 260 l~~l~~~~~~~g---~d~~rI~l~G~S~GG~la~~~a~~~ 296 (454)
++.|++....|. ...-+|.+.|||+||.+|..+|..-
T Consensus 280 l~eV~rL~~~Ypd~~ge~~sItVTGHSLGGALAtLaA~Dl 319 (518)
T PLN02719 280 LTEVKRLVERYGDEEGEELSITVTGHSLGGALAVLSAYDV 319 (518)
T ss_pred HHHHHHHHHHCCcccCCcceEEEecCcHHHHHHHHHHHHH
Confidence 344444444443 2234899999999999999988753
No 218
>PLN03037 lipase class 3 family protein; Provisional
Probab=83.00 E-value=1.8 Score=45.64 Aligned_cols=22 Identities=23% Similarity=0.309 Sum_probs=19.2
Q ss_pred CcEEEEEcCchHHHHHHHHHHH
Q 012898 275 DRIYLMGQSAGAHIAACTLLEQ 296 (454)
Q Consensus 275 ~rI~l~G~S~GG~la~~~a~~~ 296 (454)
-+|.|.|||+||.+|..+|..-
T Consensus 318 ~SItVTGHSLGGALAtLaA~DI 339 (525)
T PLN03037 318 VSLTITGHSLGGALALLNAYEA 339 (525)
T ss_pred ceEEEeccCHHHHHHHHHHHHH
Confidence 4799999999999999888653
No 219
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=82.53 E-value=13 Score=39.03 Aligned_cols=98 Identities=13% Similarity=0.007 Sum_probs=61.5
Q ss_pred CCCcEEEEEcCCCccCCcc-c-chhHHHHHHHhCCcEEEEEecCCCCCCCh--------------hHHHHHHHHHHHHHH
Q 012898 201 GPKPVVAFITGGAWIIGYK-A-WGSLLGQQLSERDIIVACIDYRNFPQGTI--------------KDMVKDASQGISFVC 264 (454)
Q Consensus 201 ~~~Pvvv~~HGgg~~~g~~-~-~~~~~~~~la~~G~~Vv~~dyr~~~~~~~--------------~~~~~D~~~al~~l~ 264 (454)
...|+.++|-|=|-....+ . ....+..+..+.|..|+..++|-+|++.. ..++.|+...++.+.
T Consensus 84 ~~gPiFLmIGGEgp~~~~wv~~~~~~~~~~AkkfgA~v~~lEHRFYG~S~P~~~~st~nlk~LSs~QALaDla~fI~~~n 163 (514)
T KOG2182|consen 84 PGGPIFLMIGGEGPESDKWVGNENLTWLQWAKKFGATVFQLEHRFYGQSSPIGDLSTSNLKYLSSLQALADLAEFIKAMN 163 (514)
T ss_pred CCCceEEEEcCCCCCCCCccccCcchHHHHHHHhCCeeEEeeeeccccCCCCCCCcccchhhhhHHHHHHHHHHHHHHHH
Confidence 3457777776644222111 1 11234444455599999999999885521 124666666666555
Q ss_pred HhhhhcCC-CCCcEEEEEcCchHHHHHHHHHHHHHhhh
Q 012898 265 NNISEYGG-DPDRIYLMGQSAGAHIAACTLLEQAIKET 301 (454)
Q Consensus 265 ~~~~~~g~-d~~rI~l~G~S~GG~la~~~a~~~~~~~~ 301 (454)
.. ++. |+.+++.+|-|.-|.+++++=...+..-.
T Consensus 164 ~k---~n~~~~~~WitFGgSYsGsLsAW~R~~yPel~~ 198 (514)
T KOG2182|consen 164 AK---FNFSDDSKWITFGGSYSGSLSAWFREKYPELTV 198 (514)
T ss_pred hh---cCCCCCCCeEEECCCchhHHHHHHHHhCchhhe
Confidence 43 333 33599999999999999988766555433
No 220
>COG3673 Uncharacterized conserved protein [Function unknown]
Probab=81.63 E-value=17 Score=36.12 Aligned_cols=90 Identities=22% Similarity=0.211 Sum_probs=55.0
Q ss_pred CCCCcEEEEEcCCCccCCcc--cchhHHHHHHHhC-CcEEEEEecCCCCCCChhH--------------------HHHHH
Q 012898 200 DGPKPVVAFITGGAWIIGYK--AWGSLLGQQLSER-DIIVACIDYRNFPQGTIKD--------------------MVKDA 256 (454)
Q Consensus 200 ~~~~Pvvv~~HGgg~~~g~~--~~~~~~~~~la~~-G~~Vv~~dyr~~~~~~~~~--------------------~~~D~ 256 (454)
+..+.+|++|-|.-...|.. .+...+...|.+. +..+++.--.+-+...+.+ -...+
T Consensus 28 ds~k~lV~CfDGT~nrfg~qp~TNVv~Ly~sl~r~d~~~qv~yYd~GVGt~Gfdavvdvrrrl~~~~~gsmFg~gL~~nI 107 (423)
T COG3673 28 DSMKRLVFCFDGTWNRFGAQPPTNVVLLYASLQRADGVTQVIYYDEGVGTGGFDAVVDVRRRLEKLSGGSMFGQGLVQNI 107 (423)
T ss_pred cCcceEEEEecCchhhcCCCCcchHHHHHHHHhcCCCceEEEEecCCcccccchhhHHHHHhhhhhhhHHHHHHHHHHHH
Confidence 34566888888743222322 2334455666653 6666665444433332211 24567
Q ss_pred HHHHHHHHHhhhhcCCCCCcEEEEEcCchHHHHHHHH
Q 012898 257 SQGISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTL 293 (454)
Q Consensus 257 ~~al~~l~~~~~~~g~d~~rI~l~G~S~GG~la~~~a 293 (454)
..|++++.++.+ .-++|+++|+|-|+.+|-.+|
T Consensus 108 ~~AYrFL~~~ye----pGD~Iy~FGFSRGAf~aRVla 140 (423)
T COG3673 108 REAYRFLIFNYE----PGDEIYAFGFSRGAFSARVLA 140 (423)
T ss_pred HHHHHHHHHhcC----CCCeEEEeeccchhHHHHHHH
Confidence 788888888754 225999999999999996555
No 221
>PF06850 PHB_depo_C: PHB de-polymerase C-terminus; InterPro: IPR009656 This entry represents the C terminus of bacterial poly(3-hydroxybutyrate) (PHB) de-polymerase. This degrades PHB granules to oligomers and monomers of 3-hydroxy-butyric acid.
Probab=81.55 E-value=2.5 Score=38.97 Aligned_cols=67 Identities=13% Similarity=0.183 Sum_probs=50.1
Q ss_pred CCEEEEEeCCCCCCChHHHHHHHHHHHHcCC-CEEEEEeCCCCccccccCCCCCCcHHHHHHHHHHHHHhc
Q 012898 353 PPIILFHGTADYSIPADASKNFANTLQRVGV-RAESILYEGKTHTDLFLQDPMRGGKDDMFEDIVAIIHAD 422 (454)
Q Consensus 353 pPvLiihGe~D~~Vp~~~s~~l~~~l~~~g~-~vel~~~~g~~H~~~~l~~p~~~~~~~~~~~i~~Fl~~~ 422 (454)
.++|-+=|+.|.+....|+....+.+..... ....++.+|+||..+|...- -.+++.-.|.+||.++
T Consensus 135 taLlTVEGe~DDIsg~GQT~AA~~LC~glp~~~k~~~~~~g~GHYGlF~G~r---wr~~I~P~i~~fi~~~ 202 (202)
T PF06850_consen 135 TALLTVEGERDDISGPGQTHAAHDLCTGLPADMKRHHLQPGVGHYGLFNGSR---WREEIYPRIREFIRQH 202 (202)
T ss_pred ceeEEeecCcccCCcchHHHHHHHHhcCCCHHHhhhcccCCCCeeecccchh---hhhhhhHHHHHHHHhC
Confidence 4788899999999999888877776653322 35667789999998875432 3467888888998764
No 222
>PLN00413 triacylglycerol lipase
Probab=81.36 E-value=2.9 Score=43.75 Aligned_cols=22 Identities=23% Similarity=0.268 Sum_probs=19.2
Q ss_pred CCcEEEEEcCchHHHHHHHHHH
Q 012898 274 PDRIYLMGQSAGAHIAACTLLE 295 (454)
Q Consensus 274 ~~rI~l~G~S~GG~la~~~a~~ 295 (454)
..+|.+.|||+||++|..++..
T Consensus 283 ~~kliVTGHSLGGALAtLaA~~ 304 (479)
T PLN00413 283 TSKFILSGHSLGGALAILFTAV 304 (479)
T ss_pred CCeEEEEecCHHHHHHHHHHHH
Confidence 3589999999999999988764
No 223
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=80.81 E-value=6.4 Score=37.30 Aligned_cols=63 Identities=22% Similarity=0.309 Sum_probs=38.2
Q ss_pred CcEEEEEecCC--CC-----CCChhHHHHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCchHHHHHHHHHHHHH
Q 012898 233 DIIVACIDYRN--FP-----QGTIKDMVKDASQGISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLLEQAI 298 (454)
Q Consensus 233 G~~Vv~~dyr~--~~-----~~~~~~~~~D~~~al~~l~~~~~~~g~d~~rI~l~G~S~GG~la~~~a~~~~~ 298 (454)
|+.++.++|.. ++ ...+... +....+-+.+.+..+....++++|+|+|+|+.++...+.+...
T Consensus 2 ~~~~~~V~YPa~f~P~~g~~~~t~~~S---v~~G~~~L~~ai~~~~~~~~~vvV~GySQGA~Va~~~~~~l~~ 71 (225)
T PF08237_consen 2 GYNVVAVDYPASFWPVTGIGSPTYDES---VAEGVANLDAAIRAAIAAGGPVVVFGYSQGAVVASNVLRRLAA 71 (225)
T ss_pred CcceEEecCCchhcCcCCCCCCccchH---HHHHHHHHHHHHHhhccCCCCEEEEEECHHHHHHHHHHHHHHh
Confidence 56677777774 22 1122233 3334444444444322255789999999999999888776543
No 224
>PLN02934 triacylglycerol lipase
Probab=80.42 E-value=3.3 Score=43.71 Aligned_cols=21 Identities=19% Similarity=0.221 Sum_probs=18.8
Q ss_pred CcEEEEEcCchHHHHHHHHHH
Q 012898 275 DRIYLMGQSAGAHIAACTLLE 295 (454)
Q Consensus 275 ~rI~l~G~S~GG~la~~~a~~ 295 (454)
.+|.+.|||+||++|..++..
T Consensus 321 ~kIvVTGHSLGGALAtLaA~~ 341 (515)
T PLN02934 321 AKFVVTGHSLGGALAILFPTV 341 (515)
T ss_pred CeEEEeccccHHHHHHHHHHH
Confidence 589999999999999988754
No 225
>PLN02209 serine carboxypeptidase
Probab=79.46 E-value=6.9 Score=40.98 Aligned_cols=63 Identities=17% Similarity=0.189 Sum_probs=47.8
Q ss_pred CCEEEEEeCCCCCCChHHHHHHHHHHHHcC--------------------CC-EEEEEeCCCCccccccCCCCCCcHHHH
Q 012898 353 PPIILFHGTADYSIPADASKNFANTLQRVG--------------------VR-AESILYEGKTHTDLFLQDPMRGGKDDM 411 (454)
Q Consensus 353 pPvLiihGe~D~~Vp~~~s~~l~~~l~~~g--------------------~~-vel~~~~g~~H~~~~l~~p~~~~~~~~ 411 (454)
-++||..|+.|.+|++-.++.+.+.|+-.+ .+ .++..+.++||. .. ..| ++.
T Consensus 352 irVLiY~GD~D~icn~~Gte~wi~~L~w~~~~~~~~w~~~~q~aG~vk~y~n~Ltfv~V~~AGHm-Vp-~qP-----~~a 424 (437)
T PLN02209 352 YRSLIFSGDHDITMPFQATQAWIKSLNYSIIDDWRPWMIKGQIAGYTRTYSNKMTFATVKGGGHT-AE-YLP-----EES 424 (437)
T ss_pred ceEEEEECCccccCCcHhHHHHHHhcCCccCCCeeeeEECCEeeeEEEEeCCceEEEEEcCCCCC-cC-cCH-----HHH
Confidence 389999999999999999999999886221 12 667778899997 32 233 677
Q ss_pred HHHHHHHHHhc
Q 012898 412 FEDIVAIIHAD 422 (454)
Q Consensus 412 ~~~i~~Fl~~~ 422 (454)
++-+.+||...
T Consensus 425 l~m~~~fi~~~ 435 (437)
T PLN02209 425 SIMFQRWISGQ 435 (437)
T ss_pred HHHHHHHHcCC
Confidence 77777888653
No 226
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=78.65 E-value=8.6 Score=40.33 Aligned_cols=65 Identities=11% Similarity=0.216 Sum_probs=47.5
Q ss_pred CCEEEEEeCCCCCCChHHHHHHHHHHHHcCC---------------------CEEEEEeCCCCccccccCCCCCCcHHHH
Q 012898 353 PPIILFHGTADYSIPADASKNFANTLQRVGV---------------------RAESILYEGKTHTDLFLQDPMRGGKDDM 411 (454)
Q Consensus 353 pPvLiihGe~D~~Vp~~~s~~l~~~l~~~g~---------------------~vel~~~~g~~H~~~~l~~p~~~~~~~~ 411 (454)
-++||..|+.|.+||+-..+.+.+.|.-... ...+..+.|+||. +....| +..
T Consensus 364 ~rvliysGD~D~~~p~~gt~~~i~~L~~~~~~~~~pW~~~~~qvaG~~~~Y~~ltf~tVrGaGH~-VP~~~p-----~~a 437 (454)
T KOG1282|consen 364 YRVLIYSGDHDLVVPFLGTQAWIKSLNLSITDEWRPWYHKGGQVAGYTKTYGGLTFATVRGAGHM-VPYDKP-----ESA 437 (454)
T ss_pred eEEEEEeCCcceeCcchhhHHHHHhccCccccCccCCccCCCceeeeEEEecCEEEEEEeCCccc-CCCCCc-----HHH
Confidence 4899999999999999998888777642210 1455778899997 444434 567
Q ss_pred HHHHHHHHHhcC
Q 012898 412 FEDIVAIIHADD 423 (454)
Q Consensus 412 ~~~i~~Fl~~~~ 423 (454)
+.-+.+||..+.
T Consensus 438 l~m~~~fl~g~~ 449 (454)
T KOG1282|consen 438 LIMFQRFLNGQP 449 (454)
T ss_pred HHHHHHHHcCCC
Confidence 777788988754
No 227
>PLN02162 triacylglycerol lipase
Probab=77.98 E-value=4 Score=42.63 Aligned_cols=22 Identities=27% Similarity=0.193 Sum_probs=18.9
Q ss_pred CCcEEEEEcCchHHHHHHHHHH
Q 012898 274 PDRIYLMGQSAGAHIAACTLLE 295 (454)
Q Consensus 274 ~~rI~l~G~S~GG~la~~~a~~ 295 (454)
..++.+.|||+||++|..++..
T Consensus 277 ~~kliVTGHSLGGALAtLaAa~ 298 (475)
T PLN02162 277 NLKYILTGHSLGGALAALFPAI 298 (475)
T ss_pred CceEEEEecChHHHHHHHHHHH
Confidence 3589999999999999887653
No 228
>PLN02847 triacylglycerol lipase
Probab=77.98 E-value=2.8 Score=45.00 Aligned_cols=21 Identities=29% Similarity=0.262 Sum_probs=18.5
Q ss_pred CcEEEEEcCchHHHHHHHHHH
Q 012898 275 DRIYLMGQSAGAHIAACTLLE 295 (454)
Q Consensus 275 ~rI~l~G~S~GG~la~~~a~~ 295 (454)
-++.+.|||+||++|..++..
T Consensus 251 YkLVITGHSLGGGVAALLAil 271 (633)
T PLN02847 251 FKIKIVGHSLGGGTAALLTYI 271 (633)
T ss_pred CeEEEeccChHHHHHHHHHHH
Confidence 389999999999999888764
No 229
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=73.65 E-value=4.6 Score=40.71 Aligned_cols=22 Identities=27% Similarity=0.466 Sum_probs=19.6
Q ss_pred CcEEEEEcCchHHHHHHHHHHH
Q 012898 275 DRIYLMGQSAGAHIAACTLLEQ 296 (454)
Q Consensus 275 ~rI~l~G~S~GG~la~~~a~~~ 296 (454)
-+|.+.|||+||.+|..++..-
T Consensus 171 ~~i~vTGHSLGgAlA~laa~~i 192 (336)
T KOG4569|consen 171 YSIWVTGHSLGGALASLAALDL 192 (336)
T ss_pred cEEEEecCChHHHHHHHHHHHH
Confidence 4899999999999999988763
No 230
>KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=72.23 E-value=15 Score=37.24 Aligned_cols=108 Identities=12% Similarity=0.090 Sum_probs=66.4
Q ss_pred eEEEEeeCCCCCC-CcEEEEEcCCCccCCcccchhHHHHHHHhC---------CcEEEEEecCCCCCCChhHH-HHHHHH
Q 012898 190 RLDLYFPKSSDGP-KPVVAFITGGAWIIGYKAWGSLLGQQLSER---------DIIVACIDYRNFPQGTIKDM-VKDASQ 258 (454)
Q Consensus 190 ~l~vy~P~~~~~~-~Pvvv~~HGgg~~~g~~~~~~~~~~~la~~---------G~~Vv~~dyr~~~~~~~~~~-~~D~~~ 258 (454)
.+++-.|+...++ .--++++|| |- |+...+..+...|.+- -|.|+++..+|++.+..+.- =-.+.+
T Consensus 138 Flhvk~p~~k~~k~v~PlLl~HG--wP-Gsv~EFykfIPlLT~p~~hg~~~d~~FEVI~PSlPGygwSd~~sk~GFn~~a 214 (469)
T KOG2565|consen 138 FLHVKPPQKKKKKKVKPLLLLHG--WP-GSVREFYKFIPLLTDPKRHGNESDYAFEVIAPSLPGYGWSDAPSKTGFNAAA 214 (469)
T ss_pred EEEecCCccccCCcccceEEecC--CC-chHHHHHhhhhhhcCccccCCccceeEEEeccCCCCcccCcCCccCCccHHH
Confidence 3555556442222 224778899 43 4443333344555433 38899999999887654421 112333
Q ss_pred HHHHHHHhhhhcCCCCCcEEEEEcCchHHHHHHHHHHHHHhhhC
Q 012898 259 GISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLLEQAIKETG 302 (454)
Q Consensus 259 al~~l~~~~~~~g~d~~rI~l~G~S~GG~la~~~a~~~~~~~~~ 302 (454)
..+-+++..-+.|.+ +.+|-|--.|..++..++.-.+....+
T Consensus 215 ~ArvmrkLMlRLg~n--kffiqGgDwGSiI~snlasLyPenV~G 256 (469)
T KOG2565|consen 215 TARVMRKLMLRLGYN--KFFIQGGDWGSIIGSNLASLYPENVLG 256 (469)
T ss_pred HHHHHHHHHHHhCcc--eeEeecCchHHHHHHHHHhhcchhhhH
Confidence 444555555566655 899999999999999998877665443
No 231
>PF03991 Prion_octapep: Copper binding octapeptide repeat; InterPro: IPR020949 Prion protein (PrP-c) [, , ] is a small glycoprotein found in high quantity in the brain of animals infected with certain degenerative neurological diseases, such as sheep scrapie and bovine spongiform encephalopathy (BSE), and the human dementias Creutzfeldt-Jacob disease (CJD) and Gerstmann-Straussler syndrome (GSS). PrP-c is encoded in the host genome and is expressed both in normal and infected cells. During infection, however, the PrP-c molecule become altered (conformationally rather than at the amino acid level) to an abnormal isoform, PrP-sc. In detergent-treated brain extracts from infected individuals, fibrils composed of polymers of PrP-sc, namely scrapie-associated fibrils or prion rods, can be evidenced by electron microscopy. The precise function of the normal PrP isoform in healthy individuals remains unknown. Several results, mainly obtained in transgenic animals, indicate that PrP-c might play a role in long-term potentiation, in sleep physiology, in oxidative burst compensation (PrP can fix four Cu2+ through its octarepeat domain), in interactions with the extracellular matrix (PrP-c can bind to the precursor of the laminin receptor, LRP), in apoptosis and in signal transduction (costimulation of PrP-c induces a modulation of Fyn kinase phosphorylation) []. The normal isoform, PrP-c, is anchored at the cell membrane, in rafts, through a glycosyl phosphatidyl inositol (GPI); its half-life at the cell surface is 5 h, after which the protein is internalised through a caveolae-dependent mechanism and degraded in the endolysosome compartment. Conversion between PrP-c and PrP-sc occurs likely during the internalisation process. This repeat is found at the amino terminus of mammalian prion proteins. It has been shown to bind to copper [].
Probab=64.66 E-value=3 Score=17.95 Aligned_cols=6 Identities=50% Similarity=1.282 Sum_probs=4.5
Q ss_pred cCCCcc
Q 012898 210 TGGAWI 215 (454)
Q Consensus 210 HGgg~~ 215 (454)
|||+|.
T Consensus 2 hgG~Wg 7 (8)
T PF03991_consen 2 HGGGWG 7 (8)
T ss_pred CCCcCC
Confidence 888873
No 232
>PF09994 DUF2235: Uncharacterized alpha/beta hydrolase domain (DUF2235); InterPro: IPR018712 This domain has no known function.
Probab=63.44 E-value=48 Score=32.32 Aligned_cols=38 Identities=32% Similarity=0.371 Sum_probs=28.5
Q ss_pred HHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCchHHHHHHHHH
Q 012898 253 VKDASQGISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLL 294 (454)
Q Consensus 253 ~~D~~~al~~l~~~~~~~g~d~~rI~l~G~S~GG~la~~~a~ 294 (454)
...+..++.++.++.. .-++|.|+|+|-|+..|-.++.
T Consensus 74 ~~~I~~ay~~l~~~~~----~gd~I~lfGFSRGA~~AR~~a~ 111 (277)
T PF09994_consen 74 EARIRDAYRFLSKNYE----PGDRIYLFGFSRGAYTARAFAN 111 (277)
T ss_pred HHHHHHHHHHHHhccC----CcceEEEEecCccHHHHHHHHH
Confidence 3456677888777652 3358999999999999977663
No 233
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=60.98 E-value=13 Score=39.16 Aligned_cols=96 Identities=17% Similarity=0.238 Sum_probs=50.7
Q ss_pred CCCCCCCcEEEEEcCCCccCCcccchhHHH--------H-------HHHhCCcEEEEEecC-CCCCCCh---------hH
Q 012898 197 KSSDGPKPVVAFITGGAWIIGYKAWGSLLG--------Q-------QLSERDIIVACIDYR-NFPQGTI---------KD 251 (454)
Q Consensus 197 ~~~~~~~Pvvv~~HGgg~~~g~~~~~~~~~--------~-------~la~~G~~Vv~~dyr-~~~~~~~---------~~ 251 (454)
+....+.|+|||++||..+.+....+...+ . .+.+ -..++.+|.+ +.|.+.. ..
T Consensus 71 ~~~~~~~Pl~lwlnGGPG~ss~~G~f~E~GP~~i~~~~~~~~~n~~sW~~-~~~~l~iDqP~G~G~S~~~~~~~~~~~~~ 149 (462)
T PTZ00472 71 RNGNPEAPVLLWMTGGPGCSSMFALLAENGPCLMNETTGDIYNNTYSWNN-EAYVIYVDQPAGVGFSYADKADYDHNESE 149 (462)
T ss_pred CCCCCCCCEEEEECCCCcHHHHHhhhccCCCeEEeCCCCceeECCccccc-ccCeEEEeCCCCcCcccCCCCCCCCChHH
Confidence 344556899999999863322110000000 0 1111 2566667754 4443321 12
Q ss_pred HHHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCchHHHHHHHHHH
Q 012898 252 MVKDASQGISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLLE 295 (454)
Q Consensus 252 ~~~D~~~al~~l~~~~~~~g~d~~rI~l~G~S~GG~la~~~a~~ 295 (454)
..+|...+++...+...+ ...++++|+|+|+||+.+..++..
T Consensus 150 ~a~d~~~~l~~f~~~~p~--~~~~~~~i~GeSygG~y~p~~a~~ 191 (462)
T PTZ00472 150 VSEDMYNFLQAFFGSHED--LRANDLFVVGESYGGHYAPATAYR 191 (462)
T ss_pred HHHHHHHHHHHHHHhCcc--ccCCCEEEEeecchhhhHHHHHHH
Confidence 344444444433222222 234689999999999999777654
No 234
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=60.26 E-value=29 Score=26.94 Aligned_cols=62 Identities=19% Similarity=0.275 Sum_probs=42.0
Q ss_pred CEEEEEeCCCCCCChHHHHHHHHHHHHcCCCEEEEEeCCCCccccccCCCCCCcHHHHHHHHHHHHH
Q 012898 354 PIILFHGTADYSIPADASKNFANTLQRVGVRAESILYEGKTHTDLFLQDPMRGGKDDMFEDIVAIIH 420 (454)
Q Consensus 354 PvLiihGe~D~~Vp~~~s~~l~~~l~~~g~~vel~~~~g~~H~~~~l~~p~~~~~~~~~~~i~~Fl~ 420 (454)
=++|+||-.|.. ..-..+++.|.+.|. .+..+.-.||+..--..-..+..+++++++.+|++
T Consensus 18 ~v~i~HG~~eh~---~ry~~~a~~L~~~G~--~V~~~D~rGhG~S~g~rg~~~~~~~~v~D~~~~~~ 79 (79)
T PF12146_consen 18 VVVIVHGFGEHS---GRYAHLAEFLAEQGY--AVFAYDHRGHGRSEGKRGHIDSFDDYVDDLHQFIQ 79 (79)
T ss_pred EEEEeCCcHHHH---HHHHHHHHHHHhCCC--EEEEECCCcCCCCCCcccccCCHHHHHHHHHHHhC
Confidence 488999998754 356667788887764 45567777787333222244567888999888873
No 235
>PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins.
Probab=60.26 E-value=28 Score=35.27 Aligned_cols=71 Identities=17% Similarity=0.242 Sum_probs=41.2
Q ss_pred CCCcEEEEEcCchHHHHHHHHHHHHHhhhCCCCCcccchhhhhhhccccCCCCCChhhhhcCCcccccCCCccccccCCC
Q 012898 273 DPDRIYLMGQSAGAHIAACTLLEQAIKETGEGESTTWSVSQIRAYFGLSGGIMDGEESLRQYSPEVLVQDPNTRHAVSLL 352 (454)
Q Consensus 273 d~~rI~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 352 (454)
..++|.|+|||+|+-+....+..-..+.. ...+...+.+.++.......|..+.. . ..
T Consensus 218 G~RpVtLvG~SLGarvI~~cL~~L~~~~~---------~~lVe~VvL~Gapv~~~~~~W~~~r~-----------v--Vs 275 (345)
T PF05277_consen 218 GERPVTLVGHSLGARVIYYCLLELAERKA---------FGLVENVVLMGAPVPSDPEEWRKIRS-----------V--VS 275 (345)
T ss_pred CCCceEEEeecccHHHHHHHHHHHHhccc---------cCeEeeEEEecCCCCCCHHHHHHHHH-----------H--cc
Confidence 44579999999999999888776443311 12234444444433333444443311 0 11
Q ss_pred CCEEEEEeCCCCC
Q 012898 353 PPIILFHGTADYS 365 (454)
Q Consensus 353 pPvLiihGe~D~~ 365 (454)
-.+.=++.++|.+
T Consensus 276 Gr~vN~YS~~D~v 288 (345)
T PF05277_consen 276 GRLVNVYSENDWV 288 (345)
T ss_pred CeEEEEecCcHHH
Confidence 2567788888866
No 236
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=57.38 E-value=1.5e+02 Score=27.01 Aligned_cols=23 Identities=13% Similarity=0.293 Sum_probs=19.6
Q ss_pred CCCcEEEEEcCchHHHHHHHHHH
Q 012898 273 DPDRIYLMGQSAGAHIAACTLLE 295 (454)
Q Consensus 273 d~~rI~l~G~S~GG~la~~~a~~ 295 (454)
...++.++|||+|+-++..++.+
T Consensus 107 ~~~~~tv~GHSYGS~v~G~A~~~ 129 (177)
T PF06259_consen 107 PDAHLTVVGHSYGSTVVGLAAQQ 129 (177)
T ss_pred CCCCEEEEEecchhHHHHHHhhh
Confidence 44599999999999999888765
No 237
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=57.18 E-value=25 Score=35.12 Aligned_cols=63 Identities=16% Similarity=0.210 Sum_probs=47.6
Q ss_pred CCEEEEEeCCCCCCChHHHHHHHHHHHHcC--------------------CC-EEEEEeCCCCccccccCCCCCCcHHHH
Q 012898 353 PPIILFHGTADYSIPADASKNFANTLQRVG--------------------VR-AESILYEGKTHTDLFLQDPMRGGKDDM 411 (454)
Q Consensus 353 pPvLiihGe~D~~Vp~~~s~~l~~~l~~~g--------------------~~-vel~~~~g~~H~~~~l~~p~~~~~~~~ 411 (454)
-++||..|+.|.+|++-..+.+.+.|+-.+ .+ .++..+.++||. .. ..| +..
T Consensus 234 i~VliY~Gd~D~icn~~g~~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~~~ltf~~V~~AGHm-V~-~qP-----~~a 306 (319)
T PLN02213 234 YRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHT-AE-YRP-----NET 306 (319)
T ss_pred ceEEEEECCcCeeCCcHhHHHHHHhcCCCCCCCCccccCCCEeeeEEEEecCcceEEEEcCCCCC-CC-cCH-----HHH
Confidence 489999999999999999999999886211 12 667777899997 32 234 677
Q ss_pred HHHHHHHHHhc
Q 012898 412 FEDIVAIIHAD 422 (454)
Q Consensus 412 ~~~i~~Fl~~~ 422 (454)
++-+-+||...
T Consensus 307 l~m~~~fi~~~ 317 (319)
T PLN02213 307 FIMFQRWISGQ 317 (319)
T ss_pred HHHHHHHHcCC
Confidence 77777888653
No 238
>KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism]
Probab=56.01 E-value=16 Score=35.66 Aligned_cols=22 Identities=36% Similarity=0.484 Sum_probs=19.4
Q ss_pred CcEEEEEcCchHHHHHHHHHHH
Q 012898 275 DRIYLMGQSAGAHIAACTLLEQ 296 (454)
Q Consensus 275 ~rI~l~G~S~GG~la~~~a~~~ 296 (454)
.+|.+.|||.||.+|+.+..+.
T Consensus 276 a~iwlTGHSLGGa~AsLlG~~f 297 (425)
T KOG4540|consen 276 ARIWLTGHSLGGAIASLLGIRF 297 (425)
T ss_pred ceEEEeccccchHHHHHhcccc
Confidence 5999999999999999887653
No 239
>COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism]
Probab=56.01 E-value=16 Score=35.66 Aligned_cols=22 Identities=36% Similarity=0.484 Sum_probs=19.4
Q ss_pred CcEEEEEcCchHHHHHHHHHHH
Q 012898 275 DRIYLMGQSAGAHIAACTLLEQ 296 (454)
Q Consensus 275 ~rI~l~G~S~GG~la~~~a~~~ 296 (454)
.+|.+.|||.||.+|+.+..+.
T Consensus 276 a~iwlTGHSLGGa~AsLlG~~f 297 (425)
T COG5153 276 ARIWLTGHSLGGAIASLLGIRF 297 (425)
T ss_pred ceEEEeccccchHHHHHhcccc
Confidence 5999999999999999887653
No 240
>PF10081 Abhydrolase_9: Alpha/beta-hydrolase family; InterPro: IPR012037 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=55.81 E-value=42 Score=32.91 Aligned_cols=80 Identities=20% Similarity=0.268 Sum_probs=46.8
Q ss_pred CCCccCCcccchhHHHHHHHhCCcEEEEEecCCCCCC--C---hhHHHHHHHHHHHHHHHhhhhcCCCC-CcEEEEEcCc
Q 012898 211 GGAWIIGYKAWGSLLGQQLSERDIIVACIDYRNFPQG--T---IKDMVKDASQGISFVCNNISEYGGDP-DRIYLMGQSA 284 (454)
Q Consensus 211 Ggg~~~g~~~~~~~~~~~la~~G~~Vv~~dyr~~~~~--~---~~~~~~D~~~al~~l~~~~~~~g~d~-~rI~l~G~S~ 284 (454)
|.||+.... ..-.+++..-+..+|++.|...+.. . -....+-..+.++-|.+......-+. -|++|.|.|+
T Consensus 42 GtGWVdp~a---~~a~E~l~~GD~A~va~QYSylPSw~sfl~dr~~a~~a~~aL~~aV~~~~~~lP~~~RPkL~l~GeSL 118 (289)
T PF10081_consen 42 GTGWVDPWA---VDALEYLYGGDVAIVAMQYSYLPSWLSFLVDRDAAREAARALFEAVYARWSTLPEDRRPKLYLYGESL 118 (289)
T ss_pred CCCccCHHH---HhHHHHHhCCCeEEEEeccccccchHHHhcccchHHHHHHHHHHHHHHHHHhCCcccCCeEEEeccCc
Confidence 566653322 2234566666899999999865421 1 11223334445555555555443332 2899999999
Q ss_pred hHHHHHHHH
Q 012898 285 GAHIAACTL 293 (454)
Q Consensus 285 GG~la~~~a 293 (454)
|+.-+....
T Consensus 119 Ga~g~~~af 127 (289)
T PF10081_consen 119 GAYGGEAAF 127 (289)
T ss_pred cccchhhhh
Confidence 998775443
No 241
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=53.90 E-value=10 Score=38.75 Aligned_cols=103 Identities=14% Similarity=0.132 Sum_probs=51.0
Q ss_pred EEEeeCC-CCCCCcEEEEEcCCCccCCcccchhHHHH----------------HHHhCCcEEEEEecCC-CCCCCh--h-
Q 012898 192 DLYFPKS-SDGPKPVVAFITGGAWIIGYKAWGSLLGQ----------------QLSERDIIVACIDYRN-FPQGTI--K- 250 (454)
Q Consensus 192 ~vy~P~~-~~~~~Pvvv~~HGgg~~~g~~~~~~~~~~----------------~la~~G~~Vv~~dyr~-~~~~~~--~- 250 (454)
.+|.+.. ..++.|+|||+.||..+.+-...+...+. .+. +-..++-+|-+. .|.+.. +
T Consensus 28 yw~~~s~~~~~~~Pl~~wlnGGPG~SS~~g~f~e~GP~~~~~~~~~~l~~n~~sW~-~~an~l~iD~PvGtGfS~~~~~~ 106 (415)
T PF00450_consen 28 YWFFESRNDPEDDPLILWLNGGPGCSSMWGLFGENGPFRINPDGPYTLEDNPYSWN-KFANLLFIDQPVGTGFSYGNDPS 106 (415)
T ss_dssp EEEEE-SSGGCSS-EEEEEE-TTTB-THHHHHCTTSSEEEETTSTSEEEE-TT-GG-GTSEEEEE--STTSTT-EESSGG
T ss_pred EEEEEeCCCCCCccEEEEecCCceeccccccccccCceEEeecccccccccccccc-cccceEEEeecCceEEeeccccc
Confidence 3444443 45678999999999633221111000000 011 125666677553 232211 1
Q ss_pred ----HHHHHHHHHHHHHHHhhhhcC-CCCCcEEEEEcCchHHHHHHHHHH
Q 012898 251 ----DMVKDASQGISFVCNNISEYG-GDPDRIYLMGQSAGAHIAACTLLE 295 (454)
Q Consensus 251 ----~~~~D~~~al~~l~~~~~~~g-~d~~rI~l~G~S~GG~la~~~a~~ 295 (454)
...+++.+..++|+.-..+|. ...++++|.|.|.||..+-.++..
T Consensus 107 ~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~ 156 (415)
T PF00450_consen 107 DYVWNDDQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASY 156 (415)
T ss_dssp GGS-SHHHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHH
T ss_pred cccchhhHHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHh
Confidence 123445555555555554443 244589999999999998776654
No 242
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=53.86 E-value=30 Score=36.33 Aligned_cols=34 Identities=15% Similarity=0.144 Sum_probs=23.2
Q ss_pred HHHHHHHhhhhcCCCCCcEEEEEcCchHHHHHHHHHH
Q 012898 259 GISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLLE 295 (454)
Q Consensus 259 al~~l~~~~~~~g~d~~rI~l~G~S~GG~la~~~a~~ 295 (454)
..+|+.++.+ ...+..+|.|.|.+|+.+-.+|..
T Consensus 155 L~~wf~kfPe---y~~~~fyI~GESYAG~YVP~La~~ 188 (454)
T KOG1282|consen 155 LQKWFEKFPE---YKSNDFYIAGESYAGHYVPALAQE 188 (454)
T ss_pred HHHHHHhChh---hcCCCeEEecccccceehHHHHHH
Confidence 3455555443 234579999999999888666644
No 243
>KOG4372 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=51.34 E-value=14 Score=37.85 Aligned_cols=84 Identities=18% Similarity=0.146 Sum_probs=43.6
Q ss_pred CCCCcEEEEEcCCCccCC-cccchhHHHHHHHhC--CcEEEEEecCCCCCCChh----HHHHHHHHHHHHHHHhhhhcCC
Q 012898 200 DGPKPVVAFITGGAWIIG-YKAWGSLLGQQLSER--DIIVACIDYRNFPQGTIK----DMVKDASQGISFVCNNISEYGG 272 (454)
Q Consensus 200 ~~~~Pvvv~~HGgg~~~g-~~~~~~~~~~~la~~--G~~Vv~~dyr~~~~~~~~----~~~~D~~~al~~l~~~~~~~g~ 272 (454)
.++.-.||+.||- .+ +...+.......... +..++...+++.--.++. .+.. ..+|+++.+.. .
T Consensus 77 ~k~~HLvVlthGi---~~~~~~~~~~~~~~~~kk~p~~~iv~~g~~~~~~~T~~Gv~~lG~R----la~~~~e~~~~--~ 147 (405)
T KOG4372|consen 77 TKPKHLVVLTHGL---HGADMEYWKEKIEQMTKKMPDKLIVVRGKMNNMCQTFDGVDVLGER----LAEEVKETLYD--Y 147 (405)
T ss_pred cCCceEEEecccc---ccccHHHHHHHHHhhhcCCCcceEeeeccccchhhccccceeeecc----cHHHHhhhhhc--c
Confidence 3444589999993 33 444444444445444 666665556532111110 1111 12223332211 1
Q ss_pred CCCcEEEEEcCchHHHHHHH
Q 012898 273 DPDRIYLMGQSAGAHIAACT 292 (454)
Q Consensus 273 d~~rI~l~G~S~GG~la~~~ 292 (454)
.-++|-.+|||.||.++..+
T Consensus 148 si~kISfvghSLGGLvar~A 167 (405)
T KOG4372|consen 148 SIEKISFVGHSLGGLVARYA 167 (405)
T ss_pred ccceeeeeeeecCCeeeeEE
Confidence 23699999999999887543
No 244
>PLN02209 serine carboxypeptidase
Probab=49.85 E-value=42 Score=35.19 Aligned_cols=41 Identities=15% Similarity=0.155 Sum_probs=26.3
Q ss_pred HHHHHHHHHHHhhhhcC-CCCCcEEEEEcCchHHHHHHHHHH
Q 012898 255 DASQGISFVCNNISEYG-GDPDRIYLMGQSAGAHIAACTLLE 295 (454)
Q Consensus 255 D~~~al~~l~~~~~~~g-~d~~rI~l~G~S~GG~la~~~a~~ 295 (454)
++.+.+++++.-..++. ...++++|+|+|.||+.+-.++..
T Consensus 146 ~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~~a~~ 187 (437)
T PLN02209 146 EVKKIHEFLQKWLIKHPQFLSNPFYVVGDSYSGMIVPALVHE 187 (437)
T ss_pred HHHHHHHHHHHHHHhCccccCCCEEEEecCcCceehHHHHHH
Confidence 34445555555444432 233579999999999988666543
No 245
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=49.65 E-value=41 Score=35.20 Aligned_cols=38 Identities=18% Similarity=0.224 Sum_probs=23.7
Q ss_pred HHHHHHHHhhhhcC-CCCCcEEEEEcCchHHHHHHHHHH
Q 012898 258 QGISFVCNNISEYG-GDPDRIYLMGQSAGAHIAACTLLE 295 (454)
Q Consensus 258 ~al~~l~~~~~~~g-~d~~rI~l~G~S~GG~la~~~a~~ 295 (454)
+..+++++-..++. ...++++|+|+|.||+.+-.++..
T Consensus 147 ~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~la~~ 185 (433)
T PLN03016 147 RTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQE 185 (433)
T ss_pred HHHHHHHHHHHhChhhcCCCEEEEccCccceehHHHHHH
Confidence 34444444333321 134579999999999988766554
No 246
>KOG2872 consensus Uroporphyrinogen decarboxylase [Coenzyme transport and metabolism]
Probab=47.76 E-value=60 Score=31.86 Aligned_cols=34 Identities=21% Similarity=0.335 Sum_probs=27.5
Q ss_pred CCCCcEEEEEcCCCccCCcccchhHHHHHHHhCCcEEEEEecCC
Q 012898 200 DGPKPVVAFITGGAWIIGYKAWGSLLGQQLSERDIIVACIDYRN 243 (454)
Q Consensus 200 ~~~~Pvvv~~HGgg~~~g~~~~~~~~~~~la~~G~~Vv~~dyr~ 243 (454)
-..-|.|+|.-|+|+ ..+.|+..||.|+..|+..
T Consensus 249 ~~~vPmi~fakG~g~----------~Le~l~~tG~DVvgLDWTv 282 (359)
T KOG2872|consen 249 LAPVPMILFAKGSGG----------ALEELAQTGYDVVGLDWTV 282 (359)
T ss_pred CCCCceEEEEcCcch----------HHHHHHhcCCcEEeecccc
Confidence 345689999999642 5688999999999999875
No 247
>TIGR00632 vsr DNA mismatch endonuclease Vsr. All proteins in this family for which functions are known are G:T mismatch endonucleases that function in a specialized mismatch repair process used usually to repair G:T mismatches in specific sections of the genome. This family was based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). Members of this family typically are found near to a DNA cytosine methyltransferase.
Probab=45.58 E-value=30 Score=29.26 Aligned_cols=44 Identities=23% Similarity=0.237 Sum_probs=27.3
Q ss_pred EEEEeeCCCCCCCcEEEEEcCCCccCCc---------------------ccchhHHHHHHHhCCcEEEEE
Q 012898 191 LDLYFPKSSDGPKPVVAFITGGAWIIGY---------------------KAWGSLLGQQLSERDIIVACI 239 (454)
Q Consensus 191 l~vy~P~~~~~~~Pvvv~~HGgg~~~g~---------------------~~~~~~~~~~la~~G~~Vv~~ 239 (454)
.+++.|+ ..++||+||..|..-. ..........|.+.|+.|+.+
T Consensus 49 pD~~~~~-----~klaIfVDGcfWHgh~c~~~~~pk~n~~fW~~Ki~~n~~rD~~~~~~L~~~Gw~Vlr~ 113 (117)
T TIGR00632 49 PDIVFDE-----YRCVIFIHGCFWHGHHCYLGKVPKTRTDFWSPKIEKNVERDRRVNSRLQELGWRVLRV 113 (117)
T ss_pred ccEEecC-----CCEEEEEcccccccCCcccccCCCccHHHHHHHHHHHHHHHHHHHHHHHHCcCEEEEE
Confidence 5666664 3599999998665211 011122446777889998865
No 248
>COG4553 DepA Poly-beta-hydroxyalkanoate depolymerase [Lipid metabolism]
Probab=45.52 E-value=22 Score=34.95 Aligned_cols=70 Identities=11% Similarity=0.130 Sum_probs=51.3
Q ss_pred CEEEEEeCCCCCCChHHHHHHHHHHHHcCC-CEEEEEeCCCCccccccCCCCCCcHHHHHHHHHHHHHhcChhh
Q 012898 354 PIILFHGTADYSIPADASKNFANTLQRVGV-RAESILYEGKTHTDLFLQDPMRGGKDDMFEDIVAIIHADDQEA 426 (454)
Q Consensus 354 PvLiihGe~D~~Vp~~~s~~l~~~l~~~g~-~vel~~~~g~~H~~~~l~~p~~~~~~~~~~~i~~Fl~~~~~~~ 426 (454)
-.+-+-||+|.+.-..|.++..+.+..... ....+.-++.||..+|... .-.+++.-.|.+||.+++...
T Consensus 341 aL~tvEGEnDDIsgvGQTkAA~~LC~nIpe~mk~hy~qp~vGHYGVFnGs---rfr~eIvPri~dFI~~~d~~~ 411 (415)
T COG4553 341 ALFTVEGENDDISGVGQTKAAHDLCSNIPEDMKQHYMQPDVGHYGVFNGS---RFREEIVPRIRDFIRRYDRSN 411 (415)
T ss_pred eEEEeecccccccccchhHHHHHHHhcChHHHHHHhcCCCCCccceeccc---hHHHHHHHHHHHHHHHhCccc
Confidence 578899999999888777776665542211 2456677999999777543 345788999999999987543
No 249
>COG3340 PepE Peptidase E [Amino acid transport and metabolism]
Probab=44.55 E-value=48 Score=31.14 Aligned_cols=41 Identities=12% Similarity=0.116 Sum_probs=24.7
Q ss_pred CCcEEEEEcCCCccCCcccchhHHHHHHHhCCcEEEEEecC
Q 012898 202 PKPVVAFITGGAWIIGYKAWGSLLGQQLSERDIIVACIDYR 242 (454)
Q Consensus 202 ~~Pvvv~~HGgg~~~g~~~~~~~~~~~la~~G~~Vv~~dyr 242 (454)
+.+.|.|+.-.+-......+.......|++.|+.+.-++..
T Consensus 31 ~~~~i~FIPtAs~~~~~~~Yv~k~~~~l~~lg~~v~~L~l~ 71 (224)
T COG3340 31 KRKTIAFIPTASVDSEDDFYVEKVRNALAKLGLEVSELHLS 71 (224)
T ss_pred CCceEEEEecCccccchHHHHHHHHHHHHHcCCeeeeeecc
Confidence 35677777764322222223344667888889988877654
No 250
>PF12122 DUF3582: Protein of unknown function (DUF3582); InterPro: IPR022732 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the N-terminal domain of membrane-bound serine endopeptidases belonging to MEROPS peptidase family S54 (rhomboid-1, clan ST). This domain contains a conserved ASW sequence motif and a single completely conserved residue F that may be functionally important. The tertiary structure of the GlpG protein from Escherichia coli has been determined []. The GlpG protein has six transmembrane domains (other members of the family are predicted to have seven), with the N- and C-terminal ends anchored in the cytoplasm. One transmembrane domain is shorter than the rest, creating an internal, aqueous cavity just below the membrane surface and it is here were proteolysis occurs. There is also a membrane-embedded loop between the first and second transmembrane domains which is postulated to act as a gate controlling substrate access to the active site. No other family of serine peptidases is known to have active site residues within transmembrane domains (although transmembrane active sites are known for aspartic peptidase and metallopeptidases), and the GlpG protein has the type structure for clan ST.; GO: 0004252 serine-type endopeptidase activity, 0016021 integral to membrane; PDB: 3UBB_A 3B45_A 3B44_A 2NRF_A 3TXT_A 2O7L_A 2XTU_A 2IRV_A 2XOW_A 2XTV_A ....
Probab=44.08 E-value=99 Score=25.36 Aligned_cols=56 Identities=14% Similarity=0.255 Sum_probs=37.3
Q ss_pred hHHHHHHHHHHHHcCCCEEEEEeCCCCccccccCCCCCCcHHHHHHHHHHHHHhcChhh
Q 012898 368 ADASKNFANTLQRVGVRAESILYEGKTHTDLFLQDPMRGGKDDMFEDIVAIIHADDQEA 426 (454)
Q Consensus 368 ~~~s~~l~~~l~~~g~~vel~~~~g~~H~~~~l~~p~~~~~~~~~~~i~~Fl~~~~~~~ 426 (454)
...+..|.+-|+..|+++++.. ++.++..+++. ..+..+++...+.+|+.+...+.
T Consensus 10 ~r~AqaF~DYl~sqgI~~~i~~-~~~~~~~lwl~--de~~~~~a~~el~~Fl~nP~~~r 65 (101)
T PF12122_consen 10 PRAAQAFIDYLASQGIELQIEP-EGQGQFALWLH--DEEHLEQAEQELEEFLQNPNDPR 65 (101)
T ss_dssp HHHHHHHHHHHHHTT--EEEE--SSSE--EEEES---GGGHHHHHHHHHHHHHS-SS--
T ss_pred HHHHHHHHHHHHHCCCeEEEEE-CCCCceEEEEe--CHHHHHHHHHHHHHHHHCCCCHH
Confidence 5679999999999998777766 44465657776 33567888899999999876543
No 251
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=42.97 E-value=30 Score=35.83 Aligned_cols=66 Identities=12% Similarity=0.232 Sum_probs=43.4
Q ss_pred CCEEEEEeCCCCCCChHHHHH-HHHHHHHcCCCEEEEEeCCCCccccccCCCCCCcHHHHHHHHHHHHHhcC
Q 012898 353 PPIILFHGTADYSIPADASKN-FANTLQRVGVRAESILYEGKTHTDLFLQDPMRGGKDDMFEDIVAIIHADD 423 (454)
Q Consensus 353 pPvLiihGe~D~~Vp~~~s~~-l~~~l~~~g~~vel~~~~g~~H~~~~l~~p~~~~~~~~~~~i~~Fl~~~~ 423 (454)
.|++|+.|..|.+ .++... +.+.+...|..+-.+..||.|+..- .+..+..+.+.+.+++||....
T Consensus 190 ~P~VIv~gGlDs~--qeD~~~l~~~~l~~rGiA~LtvDmPG~G~s~~---~~l~~D~~~l~~aVLd~L~~~p 256 (411)
T PF06500_consen 190 YPTVIVCGGLDSL--QEDLYRLFRDYLAPRGIAMLTVDMPGQGESPK---WPLTQDSSRLHQAVLDYLASRP 256 (411)
T ss_dssp EEEEEEE--TTS---GGGGHHHHHCCCHHCT-EEEEE--TTSGGGTT---T-S-S-CCHHHHHHHHHHHHST
T ss_pred CCEEEEeCCcchh--HHHHHHHHHHHHHhCCCEEEEEccCCCccccc---CCCCcCHHHHHHHHHHHHhcCC
Confidence 4999999999987 555444 4456778899999999999999732 2344455689999999998754
No 252
>PF04083 Abhydro_lipase: Partial alpha/beta-hydrolase lipase region; InterPro: IPR006693 The alpha/beta hydrolase fold is common to several hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is similar: an alpha/beta sheet, not barrel, of eight beta-sheets connected by alpha-helices []. This entry represents the N-terminal part of an alpha/beta hydrolase domain found in a number of lipases.; GO: 0006629 lipid metabolic process; PDB: 1K8Q_B 1HLG_B.
Probab=42.60 E-value=56 Score=24.26 Aligned_cols=27 Identities=22% Similarity=0.178 Sum_probs=13.5
Q ss_pred CCCCeeEEEEeeCC------CCCCCcEEEEEcC
Q 012898 185 DQPRNRLDLYFPKS------SDGPKPVVAFITG 211 (454)
Q Consensus 185 ~~~~~~l~vy~P~~------~~~~~Pvvv~~HG 211 (454)
++++-.+.+++-.. ..+++|+|++.||
T Consensus 19 T~DGYiL~l~RIp~~~~~~~~~~~k~pVll~HG 51 (63)
T PF04083_consen 19 TEDGYILTLHRIPPGKNSSNQNKKKPPVLLQHG 51 (63)
T ss_dssp -TTSEEEEEEEE-SBTTCTTTTTT--EEEEE--
T ss_pred eCCCcEEEEEEccCCCCCcccCCCCCcEEEECC
Confidence 55555566665322 3457899999999
No 253
>PRK05282 (alpha)-aspartyl dipeptidase; Validated
Probab=39.62 E-value=1.1e+02 Score=29.15 Aligned_cols=40 Identities=15% Similarity=0.170 Sum_probs=22.6
Q ss_pred CcEEEEEcCCCccCCcccchhHHHHHHHhCCcEEEEEecC
Q 012898 203 KPVVAFITGGAWIIGYKAWGSLLGQQLSERDIIVACIDYR 242 (454)
Q Consensus 203 ~Pvvv~~HGgg~~~g~~~~~~~~~~~la~~G~~Vv~~dyr 242 (454)
.|.|+|+.-.+-......+.....+.+.+.|+.|..++..
T Consensus 31 ~~~v~fIPtAs~~~~~~~y~~~~~~af~~lG~~v~~l~~~ 70 (233)
T PRK05282 31 RRKAVFIPYAGVTQSWDDYTAKVAEALAPLGIEVTGIHRV 70 (233)
T ss_pred CCeEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEeccc
Confidence 3567777654321111223344667777889988877643
No 254
>KOG2029 consensus Uncharacterized conserved protein [Function unknown]
Probab=36.81 E-value=1.1e+02 Score=33.20 Aligned_cols=25 Identities=36% Similarity=0.531 Sum_probs=19.8
Q ss_pred CCCCcEEEEEcCchHHHHHHHHHHH
Q 012898 272 GDPDRIYLMGQSAGAHIAACTLLEQ 296 (454)
Q Consensus 272 ~d~~rI~l~G~S~GG~la~~~a~~~ 296 (454)
+|.+.|.-+||||||.++=.+++..
T Consensus 523 G~~RPivwI~HSmGGLl~K~lLlda 547 (697)
T KOG2029|consen 523 GDDRPIVWIGHSMGGLLAKKLLLDA 547 (697)
T ss_pred CCCCceEEEecccchHHHHHHHHHH
Confidence 3467899999999998887766653
No 255
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=35.23 E-value=27 Score=36.00 Aligned_cols=63 Identities=13% Similarity=0.111 Sum_probs=39.6
Q ss_pred CCCEEEEEeCCCCCCChHHHHHHHHHHHHcCCCEEEEEeCCCCccccccCCCCCCcHHHHHHHHHHHHHh
Q 012898 352 LPPIILFHGTADYSIPADASKNFANTLQRVGVRAESILYEGKTHTDLFLQDPMRGGKDDMFEDIVAIIHA 421 (454)
Q Consensus 352 ~pPvLiihGe~D~~Vp~~~s~~l~~~l~~~g~~vel~~~~g~~H~~~~l~~p~~~~~~~~~~~i~~Fl~~ 421 (454)
...+|+|.|++|+-. ++.+. +.+-..+....+.||++|+.-+-.-| .....+....|.+|..-
T Consensus 351 ~~rmlFVYG~nDPW~----A~~f~--l~~g~~ds~v~~~PggnHga~I~~L~-~~~r~~a~a~l~~WaGv 413 (448)
T PF05576_consen 351 GPRMLFVYGENDPWS----AEPFR--LGKGKRDSYVFTAPGGNHGARIAGLP-EAERAEATARLRRWAGV 413 (448)
T ss_pred CCeEEEEeCCCCCcc----cCccc--cCCCCcceEEEEcCCCcccccccCCC-HHHHHHHHHHHHHHcCC
Confidence 458999999999762 22221 11112356777789999995544322 33456777888888764
No 256
>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A.
Probab=34.51 E-value=92 Score=24.27 Aligned_cols=42 Identities=17% Similarity=0.323 Sum_probs=29.6
Q ss_pred HHHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCchHHHHHHHHHH
Q 012898 252 MVKDASQGISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLLE 295 (454)
Q Consensus 252 ~~~D~~~al~~l~~~~~~~g~d~~rI~l~G~S~GG~la~~~a~~ 295 (454)
....+...++|+++...- -.|++|.|+|-|.|=.+|...++.
T Consensus 19 C~~~V~~qI~yvk~~~~~--~GpK~VLViGaStGyGLAsRIa~a 60 (78)
T PF12242_consen 19 CARNVENQIEYVKSQGKI--NGPKKVLVIGASTGYGLASRIAAA 60 (78)
T ss_dssp HHHHHHHHHHHHHHC-----TS-SEEEEES-SSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCC--CCCceEEEEecCCcccHHHHHHHH
Confidence 355677788888885433 346799999999999999887765
No 257
>COG3727 Vsr DNA G:T-mismatch repair endonuclease [DNA replication, recombination, and repair]
Probab=30.60 E-value=64 Score=27.83 Aligned_cols=37 Identities=16% Similarity=0.117 Sum_probs=22.8
Q ss_pred CcEEEEEcCCCccCCc----------ccch-----------hHHHHHHHhCCcEEEEE
Q 012898 203 KPVVAFITGGAWIIGY----------KAWG-----------SLLGQQLSERDIIVACI 239 (454)
Q Consensus 203 ~Pvvv~~HGgg~~~g~----------~~~~-----------~~~~~~la~~G~~Vv~~ 239 (454)
+.++||+||..|..-. ..++ ......|.+.|+.|+++
T Consensus 57 y~~viFvHGCFWh~H~c~~a~vPksnt~fWleKi~kNveRD~r~~~~L~~~GwrvlvV 114 (150)
T COG3727 57 YRCVIFVHGCFWHGHHCYLAKVPKSNTEFWLEKIGKNVERDERDIKRLQQLGWRVLVV 114 (150)
T ss_pred ceEEEEEeeeeccCCccccccCCCcchHHHHHHHhhhhhhhHHHHHHHHHcCCeEEEE
Confidence 4589999998775311 0111 12445777788888765
No 258
>COG0431 Predicted flavoprotein [General function prediction only]
Probab=27.54 E-value=1.3e+02 Score=27.32 Aligned_cols=64 Identities=14% Similarity=0.230 Sum_probs=42.7
Q ss_pred chhHHHHHHHhC-CcEEEEEecCCCCCCChhHHHHHHHHHHHHHHHhhhhcCCCCCcEEEEEcCchHHHHHHHHHH
Q 012898 221 WGSLLGQQLSER-DIIVACIDYRNFPQGTIKDMVKDASQGISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLLE 295 (454)
Q Consensus 221 ~~~~~~~~la~~-G~~Vv~~dyr~~~~~~~~~~~~D~~~al~~l~~~~~~~g~d~~rI~l~G~S~GG~la~~~a~~ 295 (454)
....+.+.++.. |++++++.|.++ ++..+ ..+++|+-.. .| ..+.+.+++.|.|+.-...+..+
T Consensus 57 ~v~~~~~~i~~aD~li~~tPeYn~s----~pg~l---KnaiD~l~~~--~~--~~Kpv~~~~~s~g~~~~~~a~~~ 121 (184)
T COG0431 57 AVQALREAIAAADGLIIATPEYNGS----YPGAL---KNAIDWLSRE--AL--GGKPVLLLGTSGGGAGGLRAQNQ 121 (184)
T ss_pred HHHHHHHHHHhCCEEEEECCccCCC----CCHHH---HHHHHhCCHh--Hh--CCCcEEEEecCCCchhHHHHHHH
Confidence 344566777766 999999999643 34333 4577777665 33 33578888888888777655443
No 259
>TIGR02690 resist_ArsH arsenical resistance protein ArsH. Members of this protein family occur in arsenate resistance operons that include at least two different types of arsenate reductase. ArsH is not required for arsenate resistance in some systems. This family belongs to the larger family of NADPH-dependent FMN reductases (Pfam model pfam03358). The function of ArsH is not known.
Probab=26.80 E-value=1.4e+02 Score=28.20 Aligned_cols=59 Identities=12% Similarity=0.069 Sum_probs=36.0
Q ss_pred hHHHHHHHhC-CcEEEEEecCCCCCCChhHHHHHHHHHHHHHHHhhhh-cCCCCCcEEEEEcCchHHHH
Q 012898 223 SLLGQQLSER-DIIVACIDYRNFPQGTIKDMVKDASQGISFVCNNISE-YGGDPDRIYLMGQSAGAHIA 289 (454)
Q Consensus 223 ~~~~~~la~~-G~~Vv~~dyr~~~~~~~~~~~~D~~~al~~l~~~~~~-~g~d~~rI~l~G~S~GG~la 289 (454)
..+.+.+... |++++++.|-+ .++..+ ..+++|+...... -....+.++++|.| ||..+
T Consensus 82 ~~l~~~v~~ADgvii~TPEYn~----sipg~L---KNaiDwls~~~~~~~~~~~KpvaivgaS-gg~~g 142 (219)
T TIGR02690 82 RELRQLSEWSEGQVWCSPERHG----AITGSQ---KDQIDWIPLSVGPVRPTQGKTLAVMQVS-GGSQS 142 (219)
T ss_pred HHHHHHHHhCCEEEEeCCcccc----CcCHHH---HHHHHhcccCcccccccCCCcEEEEEeC-CcHhH
Confidence 3456666666 99999999953 344433 4577788653110 01234579999998 44433
No 260
>COG4425 Predicted membrane protein [Function unknown]
Probab=24.45 E-value=2.2e+02 Score=29.99 Aligned_cols=76 Identities=18% Similarity=0.189 Sum_probs=40.4
Q ss_pred EEcCCCccCCcccchhHHHHHHHhCCcEEEEEecCCCC---------CCChhHHHHHHHHHHHHHHHhhhhcCCCCCcEE
Q 012898 208 FITGGAWIIGYKAWGSLLGQQLSERDIIVACIDYRNFP---------QGTIKDMVKDASQGISFVCNNISEYGGDPDRIY 278 (454)
Q Consensus 208 ~~HGgg~~~g~~~~~~~~~~~la~~G~~Vv~~dyr~~~---------~~~~~~~~~D~~~al~~l~~~~~~~g~d~~rI~ 278 (454)
--.|.||+... -....++|..-+.+.|++.|..-+ +....+.-.=..+.+.++.+..+ ...-|.+
T Consensus 327 ~~TGTGWIdp~---a~~t~EyL~~Gd~asVsmQYSyL~SwLSllvdpdyg~~aa~aLf~aVy~yw~qLP~---~sRPKLy 400 (588)
T COG4425 327 TSTGTGWIDPA---AADTLEYLYNGDVASVSMQYSYLPSWLSLLVDPDYGADAARALFEAVYGYWTQLPK---SSRPKLY 400 (588)
T ss_pred cCCCCCCCCHH---HHhHHHHHhCCceEEEEEehhhHHHHHHHhcCCCcchhHHHHHHHHHHHHHHhCCc---CCCCceE
Confidence 33466665332 222456676668899999987532 12211111112223334433322 1223899
Q ss_pred EEEcCchHHHH
Q 012898 279 LMGQSAGAHIA 289 (454)
Q Consensus 279 l~G~S~GG~la 289 (454)
+.|.|.|++-.
T Consensus 401 lhG~SLGa~~s 411 (588)
T COG4425 401 LHGESLGAMGS 411 (588)
T ss_pred EeccccccccC
Confidence 99999998755
No 261
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=24.36 E-value=2.8e+02 Score=25.07 Aligned_cols=67 Identities=15% Similarity=-0.012 Sum_probs=42.1
Q ss_pred CCcEEEEEcCCCccCCcccchhHHHHHHHhCCcEEEEEecCCCCCCCh--hHHHHHHHHHHHHHHHhhh
Q 012898 202 PKPVVAFITGGAWIIGYKAWGSLLGQQLSERDIIVACIDYRNFPQGTI--KDMVKDASQGISFVCNNIS 268 (454)
Q Consensus 202 ~~Pvvv~~HGgg~~~g~~~~~~~~~~~la~~G~~Vv~~dyr~~~~~~~--~~~~~D~~~al~~l~~~~~ 268 (454)
..+-++++||..-..-.......+.+.|.+.|..+...-|.+.+.... .....-....++|+.+++.
T Consensus 143 ~~~P~li~hG~~D~~Vp~~~s~~~~~~L~~~g~~~~~~~~p~~gH~~~~~~~~~~~~~~~~~f~~~~l~ 211 (213)
T PF00326_consen 143 IKPPVLIIHGENDPRVPPSQSLRLYNALRKAGKPVELLIFPGEGHGFGNPENRRDWYERILDFFDKYLK 211 (213)
T ss_dssp GGSEEEEEEETTBSSSTTHHHHHHHHHHHHTTSSEEEEEETT-SSSTTSHHHHHHHHHHHHHHHHHHTT
T ss_pred CCCCEEEEccCCCCccCHHHHHHHHHHHHhcCCCEEEEEcCcCCCCCCCchhHHHHHHHHHHHHHHHcC
Confidence 346788999953222222344557888888898888777776655332 3334456677888888753
No 262
>KOG4127 consensus Renal dipeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=24.17 E-value=2.2e+02 Score=28.95 Aligned_cols=77 Identities=23% Similarity=0.203 Sum_probs=50.0
Q ss_pred cEEEEEcCCCccCC--cccchhHHHHHHHhCCcEEEEEecCCCCCCChhHHHHHHHHHHHHHHHhhhhcCCCCCcEEEEE
Q 012898 204 PVVAFITGGAWIIG--YKAWGSLLGQQLSERDIIVACIDYRNFPQGTIKDMVKDASQGISFVCNNISEYGGDPDRIYLMG 281 (454)
Q Consensus 204 Pvvv~~HGgg~~~g--~~~~~~~~~~~la~~G~~Vv~~dyr~~~~~~~~~~~~D~~~al~~l~~~~~~~g~d~~rI~l~G 281 (454)
.-|||-|..++..- ...-.....+.+++.|=+|..-=|+.+-.....+.+.|+.+.++++++-+ |+ +.|+|.|
T Consensus 267 APVIFSHSsA~~vcns~rNVPDdVL~llk~NgGvVMVnfy~~~isc~~~A~v~~v~~Hi~hIr~Va---G~--~hIGlGg 341 (419)
T KOG4127|consen 267 APVIFSHSSAYSVCNSSRNVPDDVLQLLKENGGVVMVNFYPGFISCSDRATVSDVADHINHIRAVA---GI--DHIGLGG 341 (419)
T ss_pred CceEeecccHHHHhcCccCCcHHHHHHHhhcCCEEEEEeecccccCCCcccHHHHHHHHHHHHHhh---cc--ceeeccC
Confidence 34789999775433 22334557788888854444434555555555566899999999999875 33 4788777
Q ss_pred cCch
Q 012898 282 QSAG 285 (454)
Q Consensus 282 ~S~G 285 (454)
.=-|
T Consensus 342 ~yDG 345 (419)
T KOG4127|consen 342 DYDG 345 (419)
T ss_pred CcCC
Confidence 5443
No 263
>cd07224 Pat_like Patatin-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=23.81 E-value=93 Score=29.44 Aligned_cols=34 Identities=29% Similarity=0.333 Sum_probs=25.5
Q ss_pred HHHHHHHhhhhcCCCCCcEEEEEcCchHHHHHHHHHHH
Q 012898 259 GISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLLEQ 296 (454)
Q Consensus 259 al~~l~~~~~~~g~d~~rI~l~G~S~GG~la~~~a~~~ 296 (454)
+++++.++ |+.++.-.+.|-|+|+..+..++...
T Consensus 17 Vl~~L~e~----gi~~~~~~i~G~SAGAl~aa~~asg~ 50 (233)
T cd07224 17 VLSLLIEA----GVINETTPLAGASAGSLAAACSASGL 50 (233)
T ss_pred HHHHHHHc----CCCCCCCEEEEEcHHHHHHHHHHcCC
Confidence 45566554 45555668999999999999988754
No 264
>PF14714 KH_dom-like: KH-domain-like of EngA bacterial GTPase enzymes, C-terminal; PDB: 2HJG_A 1MKY_A.
Probab=23.44 E-value=2.1e+02 Score=22.23 Aligned_cols=40 Identities=23% Similarity=0.364 Sum_probs=26.4
Q ss_pred cCCCCCEEEEEeCCCCCCChHHHHHHHHHHHHc----CCCEEEE
Q 012898 349 VSLLPPIILFHGTADYSIPADASKNFANTLQRV----GVRAESI 388 (454)
Q Consensus 349 ~~~~pPvLiihGe~D~~Vp~~~s~~l~~~l~~~----g~~vel~ 388 (454)
....||++++++.+...++....+-+.+.+++. |.++.+.
T Consensus 35 v~~~PPtFv~f~N~~~~~~~sY~ryL~n~lRe~f~f~G~Pi~l~ 78 (80)
T PF14714_consen 35 VGTRPPTFVLFVNDPELLPESYKRYLENQLREAFGFEGVPIRLI 78 (80)
T ss_dssp EETTTTEEEEEES-CCC--HHHHHHHHHHHHHHH--TTS--EEE
T ss_pred CCCCCCEEEEEeCCcccCCHHHHHHHHHHHHHHCCCCceeEEEE
Confidence 345689999999998888888888888888763 5555543
No 265
>PRK10673 acyl-CoA esterase; Provisional
Probab=23.35 E-value=3.8e+02 Score=24.61 Aligned_cols=62 Identities=21% Similarity=0.166 Sum_probs=38.1
Q ss_pred CCCEEEEEeCCCCCCChHHHHHHHHHHHHcCCCEEEEEeCCCCccccccCCCCCCcHHHHHHHHHHHHHh
Q 012898 352 LPPIILFHGTADYSIPADASKNFANTLQRVGVRAESILYEGKTHTDLFLQDPMRGGKDDMFEDIVAIIHA 421 (454)
Q Consensus 352 ~pPvLiihGe~D~~Vp~~~s~~l~~~l~~~g~~vel~~~~g~~H~~~~l~~p~~~~~~~~~~~i~~Fl~~ 421 (454)
.+|++++||-.+.. ..-..+.+.+.+ ..+++.++--||+.... +..-...++.+++.++++.
T Consensus 16 ~~~iv~lhG~~~~~---~~~~~~~~~l~~---~~~vi~~D~~G~G~s~~--~~~~~~~~~~~d~~~~l~~ 77 (255)
T PRK10673 16 NSPIVLVHGLFGSL---DNLGVLARDLVN---DHDIIQVDMRNHGLSPR--DPVMNYPAMAQDLLDTLDA 77 (255)
T ss_pred CCCEEEECCCCCch---hHHHHHHHHHhh---CCeEEEECCCCCCCCCC--CCCCCHHHHHHHHHHHHHH
Confidence 46999999976653 234455566643 35666666666763221 1222456778888888875
No 266
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=23.33 E-value=3.7e+02 Score=24.72 Aligned_cols=67 Identities=15% Similarity=0.096 Sum_probs=33.6
Q ss_pred CCEEEEEeCCCCCCChHHHHHHHHHHHHcCCCEEEEEeCCCCccccccCCCCCCcHHHHHHHHHHHHHh
Q 012898 353 PPIILFHGTADYSIPADASKNFANTLQRVGVRAESILYEGKTHTDLFLQDPMRGGKDDMFEDIVAIIHA 421 (454)
Q Consensus 353 pPvLiihGe~D~~Vp~~~s~~l~~~l~~~g~~vel~~~~g~~H~~~~l~~p~~~~~~~~~~~i~~Fl~~ 421 (454)
+|++++||.-... ...-..+.+.+++.|..+-..-.+|.|+..........-..+.+.+++.++++.
T Consensus 26 ~~vl~~hG~~g~~--~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (288)
T TIGR01250 26 IKLLLLHGGPGMS--HEYLENLRELLKEEGREVIMYDQLGCGYSDQPDDSDELWTIDYFVDELEEVREK 92 (288)
T ss_pred CeEEEEcCCCCcc--HHHHHHHHHHHHhcCCEEEEEcCCCCCCCCCCCcccccccHHHHHHHHHHHHHH
Confidence 5899999964432 223334445555445455444445444431110000012356777777777764
No 267
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=23.13 E-value=3.8e+02 Score=25.64 Aligned_cols=42 Identities=14% Similarity=0.222 Sum_probs=28.0
Q ss_pred CCEEEEEeCCCCCC-ChHHHHHHHHHHHHcCCCEEEEEeCCCCcc
Q 012898 353 PPIILFHGTADYSI-PADASKNFANTLQRVGVRAESILYEGKTHT 396 (454)
Q Consensus 353 pPvLiihGe~D~~V-p~~~s~~l~~~l~~~g~~vel~~~~g~~H~ 396 (454)
++++++||..|..+ .......+++.+.+.|..+-..-++ ||+
T Consensus 27 ~~vv~i~gg~~~~~g~~~~~~~la~~l~~~G~~v~~~Dl~--G~G 69 (274)
T TIGR03100 27 TGVLIVVGGPQYRVGSHRQFVLLARRLAEAGFPVLRFDYR--GMG 69 (274)
T ss_pred CeEEEEeCCccccCCchhHHHHHHHHHHHCCCEEEEeCCC--CCC
Confidence 47898998877554 3445567888888877555544455 565
No 268
>COG3101 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=22.74 E-value=1.7e+02 Score=25.66 Aligned_cols=20 Identities=25% Similarity=0.622 Sum_probs=17.8
Q ss_pred EEEeeCCCCCCCcEEEEEcC
Q 012898 192 DLYFPKSSDGPKPVVAFITG 211 (454)
Q Consensus 192 ~vy~P~~~~~~~Pvvv~~HG 211 (454)
-+|+|.+..-+.-.|+|-||
T Consensus 31 PiYlPAde~vpyhri~FA~G 50 (180)
T COG3101 31 PIYLPADEEVPYHRIVFAHG 50 (180)
T ss_pred ceeccCccCCCceeEEEech
Confidence 58999988888889999999
Done!