Query 012900
Match_columns 454
No_of_seqs 171 out of 1383
Neff 8.4
Searched_HMMs 46136
Date Fri Mar 29 07:29:04 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012900.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/012900hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1282 Serine carboxypeptidas 100.0 6E-102 1E-106 778.4 32.8 389 31-447 39-439 (454)
2 PF00450 Peptidase_S10: Serine 100.0 4.2E-96 9E-101 752.3 25.1 385 30-447 5-407 (415)
3 PTZ00472 serine carboxypeptida 100.0 1.9E-93 4.1E-98 733.8 35.6 382 27-447 38-450 (462)
4 PLN03016 sinapoylglucose-malat 100.0 2E-92 4.3E-97 717.6 32.3 375 31-447 32-422 (433)
5 PLN02209 serine carboxypeptida 100.0 3.4E-90 7.4E-95 701.1 35.1 375 30-447 33-426 (437)
6 KOG1283 Serine carboxypeptidas 100.0 3.1E-84 6.7E-89 600.2 17.6 405 35-448 2-406 (414)
7 PLN02213 sinapoylglucose-malat 100.0 3.6E-69 7.8E-74 531.4 23.4 304 107-447 1-308 (319)
8 COG2939 Carboxypeptidase C (ca 100.0 1.6E-68 3.6E-73 529.8 20.7 383 31-446 71-481 (498)
9 TIGR01250 pro_imino_pep_2 prol 98.9 1.8E-07 4E-12 89.5 20.1 130 36-203 2-132 (288)
10 TIGR03611 RutD pyrimidine util 98.9 6.3E-08 1.4E-12 91.3 16.0 104 67-203 13-116 (257)
11 PHA02857 monoglyceride lipase; 98.7 8.1E-07 1.8E-11 85.8 16.3 125 44-203 8-133 (276)
12 PLN02824 hydrolase, alpha/beta 98.6 1.7E-06 3.8E-11 84.4 18.1 123 39-202 11-137 (294)
13 PF12697 Abhydrolase_6: Alpha/ 98.6 6.1E-07 1.3E-11 82.2 13.6 103 70-204 1-103 (228)
14 KOG4409 Predicted hydrolase/ac 98.6 3.5E-06 7.5E-11 81.8 17.8 138 31-204 60-197 (365)
15 TIGR03056 bchO_mg_che_rel puta 98.5 3.5E-06 7.6E-11 80.8 16.1 105 67-204 28-132 (278)
16 PRK03204 haloalkane dehalogena 98.5 2.8E-06 6.1E-11 82.8 14.2 123 36-202 14-136 (286)
17 PRK10349 carboxylesterase BioH 98.4 3.5E-06 7.5E-11 80.4 12.3 94 68-200 14-107 (256)
18 TIGR02427 protocat_pcaD 3-oxoa 98.3 1.6E-05 3.4E-10 74.1 13.7 87 67-178 13-99 (251)
19 PLN02578 hydrolase 98.2 0.00019 4E-09 72.3 20.5 100 68-201 87-186 (354)
20 TIGR01738 bioH putative pimelo 98.1 5.5E-05 1.2E-09 70.2 13.1 95 68-201 5-99 (245)
21 TIGR03343 biphenyl_bphD 2-hydr 98.1 0.00083 1.8E-08 64.7 21.5 104 68-200 31-134 (282)
22 PLN03087 BODYGUARD 1 domain co 98.0 0.00099 2.1E-08 69.4 22.3 134 34-200 174-307 (481)
23 TIGR01249 pro_imino_pep_1 prol 98.0 2.6E-05 5.7E-10 76.7 9.6 125 38-203 6-131 (306)
24 PLN02652 hydrolase; alpha/beta 97.9 0.00016 3.6E-09 73.7 13.0 132 40-203 114-246 (395)
25 PLN02298 hydrolase, alpha/beta 97.8 0.00013 2.7E-09 72.6 11.3 138 36-203 32-170 (330)
26 PF10340 DUF2424: Protein of u 97.8 7.7E-05 1.7E-09 74.2 9.5 130 48-205 105-238 (374)
27 KOG4178 Soluble epoxide hydrol 97.8 0.0012 2.5E-08 64.2 17.0 137 35-207 21-158 (322)
28 PLN02385 hydrolase; alpha/beta 97.8 0.00019 4.2E-09 71.9 11.3 127 45-202 70-197 (349)
29 PRK00870 haloalkane dehalogena 97.7 0.00029 6.3E-09 69.0 11.7 130 31-200 14-148 (302)
30 PRK06489 hypothetical protein; 97.7 0.00052 1.1E-08 69.2 13.5 112 67-200 69-187 (360)
31 PRK10673 acyl-CoA esterase; Pr 97.7 0.00012 2.6E-09 69.4 8.2 99 66-199 15-113 (255)
32 PLN02894 hydrolase, alpha/beta 97.7 0.00027 5.9E-09 72.4 10.8 106 67-201 105-210 (402)
33 PRK07581 hypothetical protein; 97.6 0.0063 1.4E-07 60.6 19.6 52 365-447 275-327 (339)
34 TIGR02240 PHA_depoly_arom poly 97.5 0.00046 9.9E-09 66.6 9.8 121 41-203 7-127 (276)
35 PRK11126 2-succinyl-6-hydroxy- 97.4 0.00024 5.2E-09 66.8 6.3 100 67-201 2-101 (242)
36 PRK10749 lysophospholipase L2; 97.4 0.00062 1.3E-08 67.8 9.4 131 39-203 33-167 (330)
37 PRK03592 haloalkane dehalogena 97.4 0.00052 1.1E-08 66.9 8.4 103 68-204 28-130 (295)
38 TIGR03695 menH_SHCHC 2-succiny 97.3 0.00046 1E-08 63.9 6.9 103 68-201 2-104 (251)
39 KOG1454 Predicted hydrolase/ac 97.3 0.0046 1E-07 61.4 13.7 93 66-180 57-150 (326)
40 COG1506 DAP2 Dipeptidyl aminop 97.2 0.00064 1.4E-08 73.6 7.5 117 45-176 374-491 (620)
41 PLN02679 hydrolase, alpha/beta 97.2 0.0028 6E-08 64.0 10.9 102 68-201 89-190 (360)
42 PLN03084 alpha/beta hydrolase 97.1 0.0023 5E-08 65.0 9.3 105 67-202 127-232 (383)
43 PLN02965 Probable pheophorbida 97.0 0.0024 5.2E-08 60.9 8.1 99 70-201 6-106 (255)
44 TIGR03101 hydr2_PEP hydrolase, 96.8 0.0073 1.6E-07 58.2 9.9 133 40-205 4-137 (266)
45 PRK05077 frsA fermentation/res 96.8 0.0054 1.2E-07 63.0 9.2 80 107-203 222-301 (414)
46 PLN02211 methyl indole-3-aceta 96.8 0.0044 9.6E-08 59.9 7.9 104 65-200 16-120 (273)
47 TIGR01840 esterase_phb esteras 96.7 0.007 1.5E-07 56.1 8.4 28 367-394 170-197 (212)
48 PLN02872 triacylglycerol lipas 96.6 0.045 9.8E-07 55.9 14.3 127 33-173 41-175 (395)
49 PRK14875 acetoin dehydrogenase 96.6 0.0077 1.7E-07 60.5 8.4 100 67-200 131-230 (371)
50 PLN02980 2-oxoglutarate decarb 96.6 0.014 3E-07 70.0 11.5 103 67-200 1371-1478(1655)
51 PRK05855 short chain dehydroge 96.4 0.015 3.2E-07 62.1 9.4 101 46-176 12-112 (582)
52 PLN02511 hydrolase 96.3 0.042 9E-07 56.1 11.5 118 38-176 73-191 (388)
53 KOG1515 Arylacetamide deacetyl 96.1 0.071 1.5E-06 52.9 11.9 143 39-203 64-208 (336)
54 PLN02442 S-formylglutathione h 96.1 0.038 8.2E-07 53.8 9.8 56 137-204 125-180 (283)
55 COG2267 PldB Lysophospholipase 96.0 0.042 9.1E-07 53.9 9.5 136 37-205 10-145 (298)
56 PRK08775 homoserine O-acetyltr 96.0 0.022 4.7E-07 57.0 7.7 75 106-201 98-172 (343)
57 PRK10566 esterase; Provisional 95.9 0.031 6.7E-07 52.8 8.3 95 67-177 27-126 (249)
58 TIGR02821 fghA_ester_D S-formy 95.9 0.063 1.4E-06 51.9 10.5 41 155-204 135-175 (275)
59 cd00707 Pancreat_lipase_like P 95.9 0.013 2.9E-07 56.7 5.5 109 67-200 36-145 (275)
60 COG0596 MhpC Predicted hydrola 95.9 0.028 6.1E-07 51.5 7.6 104 67-203 21-124 (282)
61 PF00561 Abhydrolase_1: alpha/ 95.8 0.013 2.8E-07 53.9 4.8 76 109-201 2-78 (230)
62 TIGR03100 hydr1_PEP hydrolase, 95.4 0.072 1.6E-06 51.5 8.8 108 68-203 27-135 (274)
63 KOG2564 Predicted acetyltransf 95.3 0.095 2.1E-06 49.9 8.7 106 65-197 72-177 (343)
64 TIGR01607 PST-A Plasmodium sub 95.3 0.049 1.1E-06 54.3 7.3 96 106-203 73-186 (332)
65 PRK00175 metX homoserine O-ace 95.3 0.15 3.3E-06 51.7 11.0 126 47-201 33-181 (379)
66 KOG1455 Lysophospholipase [Lip 94.9 0.066 1.4E-06 51.6 6.4 119 39-177 30-148 (313)
67 COG3509 LpqC Poly(3-hydroxybut 94.7 0.43 9.3E-06 46.0 11.2 115 39-177 38-163 (312)
68 TIGR03230 lipo_lipase lipoprot 94.7 0.14 3E-06 52.8 8.6 79 107-200 73-152 (442)
69 PF00326 Peptidase_S9: Prolyl 94.2 0.025 5.4E-07 52.2 1.9 92 105-206 12-103 (213)
70 PRK10985 putative hydrolase; P 94.2 0.58 1.3E-05 46.3 11.8 119 35-176 30-149 (324)
71 TIGR00976 /NonD putative hydro 94.0 0.22 4.8E-06 53.2 8.9 132 43-205 3-135 (550)
72 PF00975 Thioesterase: Thioest 93.6 0.27 5.8E-06 45.6 7.6 101 69-201 2-103 (229)
73 PLN00021 chlorophyllase 93.2 0.25 5.4E-06 48.8 7.0 111 66-202 51-166 (313)
74 PF12695 Abhydrolase_5: Alpha/ 92.8 0.31 6.6E-06 41.4 6.2 95 69-203 1-96 (145)
75 PRK10162 acetyl esterase; Prov 92.7 0.37 8.1E-06 47.6 7.5 44 157-203 153-196 (318)
76 PRK10115 protease 2; Provision 92.7 0.36 7.9E-06 53.0 8.0 138 44-207 424-564 (686)
77 KOG4391 Predicted alpha/beta h 92.6 0.44 9.6E-06 43.8 7.0 109 67-204 78-186 (300)
78 PF06500 DUF1100: Alpha/beta h 92.5 0.059 1.3E-06 54.6 1.6 81 106-203 217-297 (411)
79 PLN02679 hydrolase, alpha/beta 92.3 0.24 5.2E-06 49.9 5.7 56 365-447 292-348 (360)
80 cd00312 Esterase_lipase Estera 92.0 0.52 1.1E-05 49.5 8.1 33 143-176 162-194 (493)
81 KOG2382 Predicted alpha/beta h 91.8 2.1 4.5E-05 42.0 11.1 37 130-169 98-134 (315)
82 PF10230 DUF2305: Uncharacteri 91.7 0.52 1.1E-05 45.4 7.0 110 68-197 3-117 (266)
83 PRK03592 haloalkane dehalogena 91.6 0.19 4E-06 48.8 3.8 53 365-447 228-280 (295)
84 PRK10673 acyl-CoA esterase; Pr 90.8 0.41 8.9E-06 44.9 5.3 52 365-447 195-246 (255)
85 KOG2100 Dipeptidyl aminopeptid 90.7 0.58 1.3E-05 51.9 6.9 123 37-174 499-624 (755)
86 PRK11071 esterase YqiA; Provis 90.2 0.42 9E-06 43.5 4.5 76 68-178 2-81 (190)
87 PLN02965 Probable pheophorbida 90.2 0.47 1E-05 45.0 5.1 52 364-446 192-243 (255)
88 PF10503 Esterase_phd: Esteras 90.1 1.4 2.9E-05 41.2 7.9 39 154-201 93-131 (220)
89 PLN02298 hydrolase, alpha/beta 89.9 0.58 1.3E-05 46.3 5.7 51 365-444 251-301 (330)
90 PRK00870 haloalkane dehalogena 89.8 0.53 1.2E-05 45.8 5.3 59 360-447 234-292 (302)
91 PRK08775 homoserine O-acetyltr 89.8 0.34 7.3E-06 48.4 3.9 53 365-447 277-330 (343)
92 TIGR01392 homoserO_Ac_trn homo 89.7 3.2 6.9E-05 41.5 11.0 132 46-201 15-161 (351)
93 PLN02454 triacylglycerol lipas 88.9 1.1 2.3E-05 45.7 6.7 70 133-204 204-273 (414)
94 PRK11460 putative hydrolase; P 88.4 2.2 4.8E-05 40.1 8.2 36 141-177 87-122 (232)
95 TIGR02240 PHA_depoly_arom poly 88.3 0.91 2E-05 43.5 5.7 51 365-447 207-257 (276)
96 PLN02894 hydrolase, alpha/beta 88.3 0.81 1.8E-05 46.9 5.5 52 365-447 325-376 (402)
97 PF07519 Tannase: Tannase and 88.3 4.1 8.9E-05 42.7 10.8 52 143-207 104-155 (474)
98 PLN03084 alpha/beta hydrolase 87.7 0.84 1.8E-05 46.4 5.2 51 365-447 325-375 (383)
99 PLN02385 hydrolase; alpha/beta 86.4 1.3 2.9E-05 44.2 5.7 51 365-444 279-329 (349)
100 PF02230 Abhydrolase_2: Phosph 85.7 0.66 1.4E-05 42.9 2.9 58 136-204 85-142 (216)
101 COG4099 Predicted peptidase [G 85.6 10 0.00022 36.9 10.7 112 46-179 171-290 (387)
102 TIGR01392 homoserO_Ac_trn homo 85.1 1.6 3.5E-05 43.6 5.6 56 365-447 288-344 (351)
103 TIGR03502 lipase_Pla1_cef extr 84.6 3.7 8.1E-05 45.5 8.4 98 65-177 447-574 (792)
104 COG0400 Predicted esterase [Ge 84.6 11 0.00023 34.9 10.3 97 116-222 58-157 (207)
105 KOG1838 Alpha/beta hydrolase [ 84.0 5.7 0.00012 40.3 8.8 134 39-202 96-236 (409)
106 PRK13604 luxD acyl transferase 84.0 5.9 0.00013 38.9 8.7 129 41-203 14-142 (307)
107 PF06057 VirJ: Bacterial virul 83.6 2.8 6.1E-05 38.0 5.8 58 132-197 45-102 (192)
108 PRK00175 metX homoserine O-ace 83.4 1.6 3.4E-05 44.3 4.8 54 365-445 309-363 (379)
109 PF00561 Abhydrolase_1: alpha/ 82.3 2.6 5.6E-05 38.3 5.4 52 363-445 173-224 (230)
110 KOG2183 Prolylcarboxypeptidase 81.2 2.7 5.8E-05 42.5 5.1 79 84-176 100-185 (492)
111 PLN02571 triacylglycerol lipas 81.2 4.8 0.0001 41.1 7.1 70 134-204 203-277 (413)
112 PF05728 UPF0227: Uncharacteri 80.9 4 8.6E-05 37.1 5.9 41 156-208 57-97 (187)
113 PF08386 Abhydrolase_4: TAP-li 80.5 3.1 6.6E-05 33.7 4.6 28 365-392 34-61 (103)
114 PF01764 Lipase_3: Lipase (cla 80.5 2.9 6.2E-05 35.4 4.7 62 136-202 45-106 (140)
115 PRK10749 lysophospholipase L2; 80.4 1.5 3.2E-05 43.5 3.2 54 365-442 259-312 (330)
116 PF11288 DUF3089: Protein of u 80.3 2.9 6.4E-05 38.5 4.8 42 135-178 74-115 (207)
117 PRK06489 hypothetical protein; 80.1 3.6 7.8E-05 41.3 5.9 51 365-447 292-348 (360)
118 PF00326 Peptidase_S9: Prolyl 79.9 2.5 5.5E-05 38.7 4.4 52 364-442 143-194 (213)
119 PF12695 Abhydrolase_5: Alpha/ 79.6 4.4 9.5E-05 34.0 5.5 33 360-392 99-131 (145)
120 PF11144 DUF2920: Protein of u 79.5 4.1 8.8E-05 41.3 5.9 62 135-205 160-222 (403)
121 cd00741 Lipase Lipase. Lipase 79.3 3.8 8.2E-05 35.5 5.1 43 136-181 9-51 (153)
122 PRK06765 homoserine O-acetyltr 79.3 4.1 8.8E-05 41.6 6.0 57 363-446 321-378 (389)
123 PF05677 DUF818: Chlamydia CHL 77.2 6.7 0.00015 38.8 6.5 61 106-174 170-231 (365)
124 cd00519 Lipase_3 Lipase (class 76.8 5.8 0.00013 36.9 5.9 61 136-203 109-169 (229)
125 PF00151 Lipase: Lipase; Inte 75.2 1.8 3.9E-05 43.1 2.0 71 106-181 103-173 (331)
126 PLN02652 hydrolase; alpha/beta 74.5 5.4 0.00012 40.8 5.4 54 365-447 324-378 (395)
127 TIGR03695 menH_SHCHC 2-succiny 74.1 5.2 0.00011 36.3 4.8 23 424-446 221-243 (251)
128 PF02129 Peptidase_S15: X-Pro 74.0 3.8 8.2E-05 39.3 4.0 83 107-205 57-139 (272)
129 PF05577 Peptidase_S28: Serine 73.9 4.8 0.0001 41.6 4.9 66 132-206 87-152 (434)
130 PRK04940 hypothetical protein; 73.8 9.4 0.0002 34.4 6.1 61 132-207 37-97 (180)
131 KOG3975 Uncharacterized conser 73.4 6.8 0.00015 37.0 5.1 94 65-174 27-126 (301)
132 PRK05371 x-prolyl-dipeptidyl a 73.2 6.8 0.00015 43.7 6.1 88 105-207 277-378 (767)
133 PRK14875 acetoin dehydrogenase 70.7 7.4 0.00016 38.8 5.3 51 363-447 312-362 (371)
134 PLN02511 hydrolase 70.3 5.2 0.00011 40.7 4.2 52 363-444 296-347 (388)
135 PF05990 DUF900: Alpha/beta hy 70.0 8 0.00017 36.4 5.0 70 133-205 71-140 (233)
136 PF03283 PAE: Pectinacetyleste 70.0 40 0.00086 34.0 10.2 121 68-197 51-192 (361)
137 PRK11460 putative hydrolase; P 69.5 6.6 0.00014 36.8 4.4 53 364-443 147-199 (232)
138 PRK10439 enterobactin/ferric e 68.9 11 0.00024 38.7 6.1 21 158-178 288-308 (411)
139 PF07859 Abhydrolase_3: alpha/ 68.6 6.2 0.00013 35.8 3.9 65 135-204 46-112 (211)
140 TIGR01838 PHA_synth_I poly(R)- 67.3 8.3 0.00018 41.0 5.0 84 108-204 221-304 (532)
141 PF08237 PE-PPE: PE-PPE domain 67.1 18 0.00038 33.9 6.6 87 109-202 4-90 (225)
142 PLN02719 triacylglycerol lipas 66.9 9.4 0.0002 39.9 5.1 72 133-204 271-347 (518)
143 PLN02753 triacylglycerol lipas 66.8 18 0.00038 38.1 7.0 72 133-204 285-361 (531)
144 PLN02324 triacylglycerol lipas 66.4 18 0.00039 36.9 6.9 48 133-181 191-238 (415)
145 PRK10252 entF enterobactin syn 66.2 14 0.00029 43.8 7.1 101 68-200 1069-1169(1296)
146 PRK06765 homoserine O-acetyltr 65.9 80 0.0017 32.2 11.7 53 132-200 141-194 (389)
147 TIGR01607 PST-A Plasmodium sub 65.7 13 0.00027 37.0 5.7 53 365-446 270-323 (332)
148 PLN02761 lipase class 3 family 65.2 18 0.00039 38.0 6.7 72 133-204 266-344 (527)
149 PLN02934 triacylglycerol lipas 64.3 17 0.00036 38.1 6.3 41 138-181 304-344 (515)
150 PLN02211 methyl indole-3-aceta 63.2 13 0.00029 35.6 5.2 49 365-445 211-259 (273)
151 COG0596 MhpC Predicted hydrola 62.9 15 0.00033 33.0 5.4 55 361-445 217-271 (282)
152 PRK10566 esterase; Provisional 62.8 12 0.00026 34.8 4.8 49 365-438 186-234 (249)
153 PLN02733 phosphatidylcholine-s 62.5 16 0.00034 38.0 5.8 42 134-178 141-182 (440)
154 TIGR01249 pro_imino_pep_1 prol 62.3 14 0.0003 36.0 5.3 27 365-391 248-274 (306)
155 PRK14567 triosephosphate isome 62.2 19 0.00042 34.3 5.9 62 135-206 178-239 (253)
156 KOG4627 Kynurenine formamidase 62.1 14 0.00031 33.9 4.7 72 118-203 102-173 (270)
157 PRK10985 putative hydrolase; P 61.7 14 0.00031 36.4 5.2 46 365-441 255-300 (324)
158 PRK14566 triosephosphate isome 61.5 19 0.00041 34.5 5.7 62 135-206 188-249 (260)
159 PF10081 Abhydrolase_9: Alpha/ 61.1 16 0.00035 35.2 5.1 38 133-170 84-121 (289)
160 COG0657 Aes Esterase/lipase [L 60.0 45 0.00097 32.5 8.4 45 157-206 151-195 (312)
161 PF02230 Abhydrolase_2: Phosph 58.9 15 0.00032 33.8 4.6 48 365-439 155-202 (216)
162 PRK05855 short chain dehydroge 58.9 9 0.00019 40.7 3.5 49 365-445 233-281 (582)
163 KOG3079 Uridylate kinase/adeny 55.5 7.3 0.00016 35.1 1.7 15 66-80 6-20 (195)
164 PLN02408 phospholipase A1 55.0 21 0.00045 36.0 5.0 46 135-181 178-223 (365)
165 PLN02980 2-oxoglutarate decarb 54.9 17 0.00036 44.4 5.2 65 363-447 1566-1630(1655)
166 COG2272 PnbA Carboxylesterase 54.5 37 0.00079 35.4 6.8 32 143-175 166-197 (491)
167 PLN00413 triacylglycerol lipas 54.2 26 0.00057 36.4 5.7 39 139-180 268-306 (479)
168 PF11187 DUF2974: Protein of u 53.5 36 0.00078 31.8 6.1 49 142-199 72-120 (224)
169 PRK13604 luxD acyl transferase 53.4 31 0.00067 33.9 5.8 28 365-392 202-229 (307)
170 COG0400 Predicted esterase [Ge 53.3 20 0.00043 33.1 4.3 29 364-392 145-173 (207)
171 KOG2281 Dipeptidyl aminopeptid 53.1 40 0.00086 36.3 6.8 136 46-211 622-771 (867)
172 PF03583 LIP: Secretory lipase 52.9 19 0.00041 35.1 4.4 48 365-438 219-266 (290)
173 KOG1553 Predicted alpha/beta h 52.1 33 0.00071 34.1 5.6 57 127-197 284-340 (517)
174 smart00824 PKS_TE Thioesterase 51.8 47 0.001 29.3 6.6 76 106-199 24-99 (212)
175 PLN02429 triosephosphate isome 51.4 34 0.00074 33.7 5.7 62 135-206 238-300 (315)
176 PF05057 DUF676: Putative seri 50.7 29 0.00063 32.1 5.1 48 133-181 54-101 (217)
177 PF13956 Ibs_toxin: Toxin Ibs, 50.0 11 0.00023 20.2 1.1 14 1-14 1-14 (19)
178 KOG3724 Negative regulator of 48.7 1.5E+02 0.0033 32.9 10.4 154 10-176 24-200 (973)
179 PLN02802 triacylglycerol lipas 48.2 47 0.001 34.9 6.4 64 136-203 309-372 (509)
180 KOG1552 Predicted alpha/beta h 47.9 49 0.0011 31.5 6.0 77 107-203 88-164 (258)
181 PLN02310 triacylglycerol lipas 47.4 46 0.00099 34.0 6.1 65 135-203 185-250 (405)
182 PLN02162 triacylglycerol lipas 46.1 44 0.00094 34.7 5.8 40 139-181 262-301 (475)
183 PF08840 BAAT_C: BAAT / Acyl-C 44.4 34 0.00074 31.5 4.5 44 147-200 11-54 (213)
184 PLN02561 triosephosphate isome 44.4 44 0.00095 31.9 5.2 60 135-204 179-239 (253)
185 PRK11126 2-succinyl-6-hydroxy- 44.1 14 0.00031 34.0 1.9 24 424-447 210-233 (242)
186 TIGR01836 PHA_synth_III_C poly 42.0 49 0.0011 32.9 5.5 77 108-203 95-172 (350)
187 PLN03037 lipase class 3 family 41.8 62 0.0013 34.1 6.1 46 136-181 295-341 (525)
188 COG0627 Predicted esterase [Ge 41.5 64 0.0014 31.9 6.1 107 65-178 52-172 (316)
189 TIGR01836 PHA_synth_III_C poly 41.4 41 0.00089 33.4 4.9 30 363-392 284-313 (350)
190 PF06259 Abhydrolase_8: Alpha/ 39.6 54 0.0012 29.5 4.8 63 106-176 62-127 (177)
191 PLN02847 triacylglycerol lipas 38.8 42 0.00092 35.9 4.5 60 139-205 235-295 (633)
192 PRK00042 tpiA triosephosphate 38.7 79 0.0017 30.1 6.0 61 135-206 179-240 (250)
193 COG1506 DAP2 Dipeptidyl aminop 38.7 45 0.00098 36.3 5.0 48 365-439 551-598 (620)
194 PF12740 Chlorophyllase2: Chlo 38.7 68 0.0015 30.7 5.5 63 132-200 61-129 (259)
195 COG0429 Predicted hydrolase of 38.6 65 0.0014 32.0 5.4 53 139-200 132-184 (345)
196 PF09292 Neil1-DNA_bind: Endon 38.3 19 0.00042 23.2 1.2 11 68-78 25-35 (39)
197 PTZ00333 triosephosphate isome 37.5 64 0.0014 30.8 5.2 61 134-204 181-242 (255)
198 PF08840 BAAT_C: BAAT / Acyl-C 37.2 32 0.0007 31.7 3.1 48 365-437 115-163 (213)
199 TIGR03712 acc_sec_asp2 accesso 37.0 1.5E+02 0.0033 31.0 8.0 113 48-204 277-392 (511)
200 PF06342 DUF1057: Alpha/beta h 36.6 1.9E+02 0.0041 28.2 8.1 98 68-200 36-135 (297)
201 KOG4569 Predicted lipase [Lipi 36.3 65 0.0014 32.1 5.3 60 139-203 155-214 (336)
202 COG3208 GrsT Predicted thioest 35.7 52 0.0011 31.1 4.1 64 108-181 34-97 (244)
203 KOG1552 Predicted alpha/beta h 35.5 33 0.00071 32.6 2.8 27 365-391 192-218 (258)
204 cd00311 TIM Triosephosphate is 34.8 1E+02 0.0022 29.3 6.0 60 136-206 176-236 (242)
205 PRK14565 triosephosphate isome 33.6 83 0.0018 29.7 5.2 55 134-206 172-226 (237)
206 COG4757 Predicted alpha/beta h 33.5 43 0.00092 31.6 3.1 65 108-176 58-123 (281)
207 PF01083 Cutinase: Cutinase; 33.1 79 0.0017 28.3 4.8 81 109-203 41-124 (179)
208 PF05448 AXE1: Acetyl xylan es 32.4 1.8E+02 0.004 28.7 7.7 55 137-202 155-209 (320)
209 PF08538 DUF1749: Protein of u 32.1 2.5E+02 0.0055 27.6 8.3 71 132-206 81-152 (303)
210 PF05436 MF_alpha_N: Mating fa 30.1 56 0.0012 25.5 2.8 45 3-47 2-48 (86)
211 PF15253 STIL_N: SCL-interrupt 29.9 55 0.0012 33.3 3.5 41 29-75 193-235 (410)
212 TIGR01838 PHA_synth_I poly(R)- 29.9 2.1E+02 0.0045 30.6 8.0 49 365-444 415-463 (532)
213 PF07172 GRP: Glycine rich pro 29.7 45 0.00097 26.7 2.3 18 8-25 8-25 (95)
214 KOG3101 Esterase D [General fu 29.6 53 0.0012 30.4 3.0 42 157-207 140-181 (283)
215 PF00121 TIM: Triosephosphate 29.2 29 0.00064 32.9 1.4 63 135-207 177-240 (244)
216 COG3319 Thioesterase domains o 29.0 2.5E+02 0.0055 26.8 7.7 88 68-181 1-88 (257)
217 PF03991 Prion_octapep: Copper 28.5 31 0.00067 14.5 0.6 6 449-454 2-7 (8)
218 PRK06762 hypothetical protein; 28.3 34 0.00074 29.8 1.6 13 68-80 2-14 (166)
219 COG3571 Predicted hydrolase of 28.1 42 0.00091 29.7 2.0 26 154-179 85-110 (213)
220 PF06309 Torsin: Torsin; Inte 28.0 49 0.0011 28.0 2.4 14 67-80 52-65 (127)
221 PF03959 FSH1: Serine hydrolas 27.8 55 0.0012 30.1 2.9 48 365-443 161-208 (212)
222 PF12532 DUF3732: Protein of u 27.2 90 0.0019 28.4 4.1 44 108-151 101-151 (193)
223 PLN02442 S-formylglutathione h 26.0 96 0.0021 29.9 4.4 30 363-392 215-245 (283)
224 KOG3411 40S ribosomal protein 25.8 37 0.00079 28.6 1.2 81 85-183 40-134 (143)
225 PF07389 DUF1500: Protein of u 25.7 56 0.0012 25.5 2.1 28 139-168 7-34 (100)
226 PF01583 APS_kinase: Adenylyls 25.4 41 0.0009 29.5 1.6 13 67-79 1-13 (156)
227 TIGR03100 hydr1_PEP hydrolase, 25.0 1.1E+02 0.0023 29.2 4.6 62 360-445 202-264 (274)
228 PF10503 Esterase_phd: Esteras 23.9 71 0.0015 29.8 2.9 27 365-391 169-195 (220)
229 PRK13962 bifunctional phosphog 23.7 1.4E+02 0.003 32.7 5.4 62 135-206 574-636 (645)
230 PF06821 Ser_hydrolase: Serine 23.5 1.5E+02 0.0032 26.3 4.8 27 366-392 115-141 (171)
231 PF01738 DLH: Dienelactone hyd 23.0 79 0.0017 28.8 3.1 42 134-176 75-116 (218)
232 PF07819 PGAP1: PGAP1-like pro 22.9 1.5E+02 0.0032 27.7 4.8 39 135-173 60-100 (225)
233 COG3150 Predicted esterase [Ge 22.8 1.6E+02 0.0035 26.3 4.6 61 131-210 39-99 (191)
234 PLN03082 Iron-sulfur cluster a 22.0 55 0.0012 29.0 1.7 57 67-124 78-145 (163)
235 PF08060 NOSIC: NOSIC (NUC001) 21.8 91 0.002 21.8 2.5 21 136-156 14-35 (53)
236 PF04414 tRNA_deacylase: D-ami 21.6 2.2E+02 0.0047 26.4 5.6 100 68-181 30-151 (213)
237 COG0149 TpiA Triosephosphate i 21.3 2.5E+02 0.0055 26.7 6.0 69 117-207 171-240 (251)
238 PF14020 DUF4236: Protein of u 21.0 48 0.0011 23.6 0.9 14 110-124 41-54 (55)
239 PRK15492 triosephosphate isome 20.7 2E+02 0.0044 27.5 5.4 60 136-206 189-249 (260)
240 COG2945 Predicted hydrolase of 20.5 1.2E+02 0.0027 27.7 3.5 55 118-179 70-124 (210)
No 1
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=100.00 E-value=5.5e-102 Score=778.36 Aligned_cols=389 Identities=25% Similarity=0.418 Sum_probs=317.8
Q ss_pred CCCCceeeEEEEecC--CceEEEEEEEcCCCCCCCCCCCCEEEEEcCCCChhhhhhccccccCCCccc-----CCCCccc
Q 012900 31 NQDASEEWGYVEVRP--KAHMFWWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPFDTY-----LKPRNST 103 (454)
Q Consensus 31 ~~~~~~~sGyv~v~~--~~~lfywf~es~~~~~~p~~~~PlilWlnGGPGcSS~~~G~f~E~GP~~~~-----~~~n~~S 103 (454)
.+++++|||||+|++ +++||||||||+ ++|++| ||||||||||||||+ .|+|+|+|||+++ |..|+||
T Consensus 39 ~~~f~~ysGYv~v~~~~~~~LFYwf~eS~---~~P~~d-PlvLWLnGGPGCSSl-~G~~~E~GPf~v~~~G~tL~~N~yS 113 (454)
T KOG1282|consen 39 PLPFKQYSGYVTVNESEGRQLFYWFFESE---NNPETD-PLVLWLNGGPGCSSL-GGLFEENGPFRVKYNGKTLYLNPYS 113 (454)
T ss_pred CCCcccccceEECCCCCCceEEEEEEEcc---CCCCCC-CEEEEeCCCCCccch-hhhhhhcCCeEEcCCCCcceeCCcc
Confidence 456999999999985 589999999985 578665 999999999999999 5999999999985 6679999
Q ss_pred hhccccceeecCCcccccCCccCCCCcccchHHHHHHHHHHHHHHHHhccccCCCCEEEEecccCcchhHHHHHHHHHHH
Q 012900 104 WLKKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAI 183 (454)
Q Consensus 104 W~~~anvLfiDqPvGtGfSy~~~~~~~~~~~~~~A~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~lA~~i~~~~ 183 (454)
|||.||||||||||||||||+++.+.+.++|+.+|+|+++||++||++||||++|||||+||||||||||+||++|+++|
T Consensus 114 Wnk~aNiLfLd~PvGvGFSYs~~~~~~~~~D~~~A~d~~~FL~~wf~kfPey~~~~fyI~GESYAG~YVP~La~~I~~~N 193 (454)
T KOG1282|consen 114 WNKEANILFLDQPVGVGFSYSNTSSDYKTGDDGTAKDNYEFLQKWFEKFPEYKSNDFYIAGESYAGHYVPALAQEILKGN 193 (454)
T ss_pred ccccccEEEEecCCcCCccccCCCCcCcCCcHHHHHHHHHHHHHHHHhChhhcCCCeEEecccccceehHHHHHHHHhcc
Confidence 99999999999999999999998877778999999999999999999999999999999999999999999999999998
Q ss_pred Hc-CCceeeeeeeEecccCCCchhhhhhcccccccCCCCChhHHHHHHHHHHHHHHHhhcCCCcchhhHHHHHHHHHH-h
Q 012900 184 EA-GKLKLKLGGVALGDSWISPEDFVFSWGPLLKDMSRLDTNGFAKSNQIAQKIKQQLEAGEFVGATDSWAQLESVIS-Q 261 (454)
Q Consensus 184 ~~-~~~~inLkGi~iGNg~~~p~~~~~~~~~~~~~~glid~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~-~ 261 (454)
+. ....|||||++||||++||..+..++.+|++.+|+|++..++.+++.|..+... ..+.......|..+...+. +
T Consensus 194 ~~~~~~~iNLkG~~IGNg~td~~~~~~~~~~~a~~h~liSde~~~~l~~~C~~~~~~--~~~~~~~~~~C~~~~~~~~~~ 271 (454)
T KOG1282|consen 194 KKCCKPNINLKGYAIGNGLTDPEIDYNGRIPFAWGHGLISDELYESLKRACDFSSDN--YANVDPSNTKCNKAVEEFDSK 271 (454)
T ss_pred ccccCCcccceEEEecCcccCccccccchhhhhhhcccCCHHHHHHHHHHhccCccc--ccccCCchhHHHHHHHHHHHH
Confidence 75 346799999999999999999999999999999999987766554432221110 0111122446777666555 5
Q ss_pred hCCCccchhcccccCCCCccccccccccccccchhhhcccccCCCCCCCCchhhhhccH-HHHHHhccCCCCc-cccccC
Q 012900 262 NSNAVDFYNFLLDSGMDPVSLTASTLAVGASMRKYSRYLSAHKSSTPDGDGDVGSLMNG-VIKKKLKIIPENI-TWGGQS 339 (454)
Q Consensus 262 ~~~~~n~ydi~~~~~~~p~~~~~~~~~~~~~~~~~~~yl~~~~~~~p~~~~~i~~~lN~-~V~~aL~i~~~~~-~w~~cs 339 (454)
...+++.|+++.+.|...... .+...... ...||.....+.|||+ +||+|||+....+ +|+.||
T Consensus 272 ~~~~i~~y~i~~~~C~~~~~~-------~~~~~~~~-------~~~~c~~~~~~~ylN~~~VrkALh~~~~~~~~W~~Cn 337 (454)
T KOG1282|consen 272 TTGDIDNYYILTPDCYPTSYE-------LKKPTDCY-------GYDPCLSDYAEKYLNRPEVRKALHANKTSIGKWERCN 337 (454)
T ss_pred HhccCchhhhcchhhcccccc-------cccccccc-------ccCCchhhhHHHhcCCHHHHHHhCCCCCCCCcccccC
Confidence 566888888887766431000 00000000 1245655555889999 6999999976655 799999
Q ss_pred hhhhhhccCCCCccchHHHHHHhhcC-ceEEEEeccCCCCCChhhHHHHHHhcccccccccccCCceeeEeCCCceeeeE
Q 012900 340 DSVFTELSGDFMRPRISEVDELLAKG-VNVTVYNGQLDVICSTKGTEAWIEKLKWDGLQKFLSTERTPLFCGNDKITKGF 418 (454)
Q Consensus 340 ~~v~~~~~~D~~~~~~~~l~~LL~~~-irVLiy~Gd~D~i~n~~G~~~~i~~L~W~g~~~f~~a~~~~w~~~~~~~~~G~ 418 (454)
+.|+..+. |...++++.+..++.++ +|||||+||.|++||+.||++||++|+++.. ++++||+.+. +|++||
T Consensus 338 ~~v~~~~~-~~~~sm~p~~~~~~~~~~~rvliysGD~D~~~p~~gt~~~i~~L~~~~~-----~~~~pW~~~~-~qvaG~ 410 (454)
T KOG1282|consen 338 DEVNYNYN-DDIKSMLPIHKKLIASGGYRVLIYSGDHDLVVPFLGTQAWIKSLNLSIT-----DEWRPWYHKG-GQVAGY 410 (454)
T ss_pred hhhhcccc-cCccchHHHHHHHhhcCceEEEEEeCCcceeCcchhhHHHHHhccCccc-----cCccCCccCC-Cceeee
Confidence 99987653 44566777777888855 9999999999999999999999999996654 4558998743 689999
Q ss_pred EEEEcCeEEEEEcCCcccccccCChhhhh
Q 012900 419 KKSYKNLHFYWILGAGHFKNYCDTWSGKR 447 (454)
Q Consensus 419 ~k~~~nLtf~~V~~AGHmvP~dqP~~~~~ 447 (454)
+++|++|+|++|+|||||||+|||++|++
T Consensus 411 ~~~Y~~ltf~tVrGaGH~VP~~~p~~al~ 439 (454)
T KOG1282|consen 411 TKTYGGLTFATVRGAGHMVPYDKPESALI 439 (454)
T ss_pred EEEecCEEEEEEeCCcccCCCCCcHHHHH
Confidence 99999999999999999999999999953
No 2
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=100.00 E-value=4.2e-96 Score=752.27 Aligned_cols=385 Identities=33% Similarity=0.592 Sum_probs=299.7
Q ss_pred CCCCCceeeEEEEec--CCceEEEEEEEcCCCCCCCCCCCCEEEEEcCCCChhhhhhccccccCCCccc------CCCCc
Q 012900 30 KNQDASEEWGYVEVR--PKAHMFWWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPFDTY------LKPRN 101 (454)
Q Consensus 30 ~~~~~~~~sGyv~v~--~~~~lfywf~es~~~~~~p~~~~PlilWlnGGPGcSS~~~G~f~E~GP~~~~------~~~n~ 101 (454)
.++++++|||||+|+ .+++||||||||+ ++|++ +||||||||||||||| .|+|+|+|||+++ +..|+
T Consensus 5 ~~~~~~~~sGyl~~~~~~~~~lfyw~~~s~---~~~~~-~Pl~~wlnGGPG~SS~-~g~f~e~GP~~~~~~~~~~l~~n~ 79 (415)
T PF00450_consen 5 EPVPFKQYSGYLPVNDNENAHLFYWFFESR---NDPED-DPLILWLNGGPGCSSM-WGLFGENGPFRINPDGPYTLEDNP 79 (415)
T ss_dssp S-SSSEEEEEEEEECTTTTEEEEEEEEE-S---SGGCS-S-EEEEEE-TTTB-TH-HHHHCTTSSEEEETTSTSEEEE-T
T ss_pred CCCCceEEEEEEecCCCCCcEEEEEEEEeC---CCCCC-ccEEEEecCCceeccc-cccccccCceEEeecccccccccc
Confidence 357899999999998 5689999999985 36755 5999999999999999 7999999999987 46799
Q ss_pred cchhccccceeecCCcccccCCccCCCCcccchHHHHHHHHHHHHHHHHhccccCCCCEEEEecccCcchhHHHHHHHHH
Q 012900 102 STWLKKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVK 181 (454)
Q Consensus 102 ~SW~~~anvLfiDqPvGtGfSy~~~~~~~~~~~~~~A~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~lA~~i~~ 181 (454)
+||+++||||||||||||||||+.+...++.+++++|+++++||++||++||+|+++||||+||||||||||.+|.+|++
T Consensus 80 ~sW~~~an~l~iD~PvGtGfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i~~ 159 (415)
T PF00450_consen 80 YSWNKFANLLFIDQPVGTGFSYGNDPSDYVWNDDQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYILQ 159 (415)
T ss_dssp T-GGGTSEEEEE--STTSTT-EESSGGGGS-SHHHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHHHH
T ss_pred cccccccceEEEeecCceEEeeccccccccchhhHHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhhhh
Confidence 99999999999999999999999877667889999999999999999999999999999999999999999999999999
Q ss_pred HHHcC-CceeeeeeeEecccCCCchhhhhhcccccccCCCCChhHHHHHHHHHHHHHHHhhcCCCcchhhHHHHHHHHH-
Q 012900 182 AIEAG-KLKLKLGGVALGDSWISPEDFVFSWGPLLKDMSRLDTNGFAKSNQIAQKIKQQLEAGEFVGATDSWAQLESVI- 259 (454)
Q Consensus 182 ~~~~~-~~~inLkGi~iGNg~~~p~~~~~~~~~~~~~~glid~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~- 259 (454)
++++. ..+||||||+||||++||..++.++.+|++.+|+|++..++.+++.++.+ . ........|.+....+
T Consensus 160 ~~~~~~~~~inLkGi~IGng~~dp~~~~~s~~~~~~~~gli~~~~~~~~~~~~~~~----~--~~~~~~~~c~~~~~~~~ 233 (415)
T PF00450_consen 160 QNKKGDQPKINLKGIAIGNGWIDPRIQYNSYADYAYYHGLIDDQQYDDLNKACEAC----P--QCQKAITECAAALDELS 233 (415)
T ss_dssp HTCC--STTSEEEEEEEESE-SBHHHHHHHHHHHHHHTTSS-HHHHHHHHHHHTTS----H--SSSCCHHHHHHHHHHHH
T ss_pred ccccccccccccccceecCccccccccceeecccccccCcccHHHHHHHHHHhhcc----c--cccchhhHHHHHHHhhh
Confidence 87543 35899999999999999999999999999999999988776655443221 1 1122333444433322
Q ss_pred -----HhhCCCccchhcccccCCCCccccccccccccccchhhhcccccCCCCCCCCchhhhhccH-HHHHHhccC-CCC
Q 012900 260 -----SQNSNAVDFYNFLLDSGMDPVSLTASTLAVGASMRKYSRYLSAHKSSTPDGDGDVGSLMNG-VIKKKLKII-PEN 332 (454)
Q Consensus 260 -----~~~~~~~n~ydi~~~~~~~p~~~~~~~~~~~~~~~~~~~yl~~~~~~~p~~~~~i~~~lN~-~V~~aL~i~-~~~ 332 (454)
.+..+++|+||++.+|+..... .+... ....+.....+..|||+ +||++||+. +..
T Consensus 234 ~~~~~~~~~~~~n~Ydi~~~~~~~~~~----------------~~~~~-~~~~~~~~~~~~~yln~~~Vr~aL~v~~~~~ 296 (415)
T PF00450_consen 234 CQYAISQCNGGINPYDIRQPCYNPSRS----------------SYDNS-PSNDPPDDDYLEAYLNRPDVREALHVPVDSN 296 (415)
T ss_dssp HHCHHHHHHTTSETTSTTSEETT-SHC----------------TTCCC-CTTTTTCHHHHHHHHTSHHHHHHTT-STTTS
T ss_pred hhcccccccCCcceeeeeccccccccc----------------ccccc-ccccccchhhHHHHhccHHHHHhhCCCcccC
Confidence 2345799999999888531000 00000 00122234677889999 699999986 456
Q ss_pred ccccccChhh-hhhccCCCCccchHHHHHHhhcCceEEEEeccCCCCCChhhHHHHHHhcccccccccccCCceeeEeCC
Q 012900 333 ITWGGQSDSV-FTELSGDFMRPRISEVDELLAKGVNVTVYNGQLDVICSTKGTEAWIEKLKWDGLQKFLSTERTPLFCGN 411 (454)
Q Consensus 333 ~~w~~cs~~v-~~~~~~D~~~~~~~~l~~LL~~~irVLiy~Gd~D~i~n~~G~~~~i~~L~W~g~~~f~~a~~~~w~~~~ 411 (454)
.+|+.|++.| +.....|.+.++.+.++.||++++|||||+||+|++||+.|+++|+++|+|+++++|+.++++ .
T Consensus 297 ~~w~~~~~~V~~~~~~~d~~~~~~~~l~~lL~~~irVLiy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~f~~~~~~-----~ 371 (415)
T PF00450_consen 297 VNWQSCNDAVNFNWLYDDFMPSSIPDLPELLDNGIRVLIYNGDLDLICNFLGTERWIDNLNWSGKDGFRQWPRK-----V 371 (415)
T ss_dssp SS--SB-HHHHHHCCTCCC-SBCHHHHHHHHHTT-EEEEEEETT-SSS-HHHHHHHHHCTECTEEEEEEEEEEE-----T
T ss_pred CcccccCcccccccccccccccchhhhhhhhhccceeEEeccCCCEEEEeccchhhhhccccCccccccccccc-----c
Confidence 7999999999 556677888999999999999999999999999999999999999999999999999876654 3
Q ss_pred CceeeeEEEEEcCeEEEEEcCCcccccccCChhhhh
Q 012900 412 DKITKGFKKSYKNLHFYWILGAGHFKNYCDTWSGKR 447 (454)
Q Consensus 412 ~~~~~G~~k~~~nLtf~~V~~AGHmvP~dqP~~~~~ 447 (454)
+++++||+|+++||||++|++||||||+|||++|++
T Consensus 372 ~~~~~G~~k~~~~ltf~~V~~AGHmvP~dqP~~a~~ 407 (415)
T PF00450_consen 372 NGQVAGYVKQYGNLTFVTVRGAGHMVPQDQPEAALQ 407 (415)
T ss_dssp TCSEEEEEEEETTEEEEEETT--SSHHHHSHHHHHH
T ss_pred cccccceeEEeccEEEEEEcCCcccChhhCHHHHHH
Confidence 468999999999999999999999999999999985
No 3
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=100.00 E-value=1.9e-93 Score=733.82 Aligned_cols=382 Identities=24% Similarity=0.435 Sum_probs=329.5
Q ss_pred hhcCCCCCceeeEEEEecC---CceEEEEEEEcCCCCCCCCCCCCEEEEEcCCCChhhhhhccccccCCCcccC-----C
Q 012900 27 ALNKNQDASEEWGYVEVRP---KAHMFWWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPFDTYL-----K 98 (454)
Q Consensus 27 ~~~~~~~~~~~sGyv~v~~---~~~lfywf~es~~~~~~p~~~~PlilWlnGGPGcSS~~~G~f~E~GP~~~~~-----~ 98 (454)
.+++.++++++||||+|++ +++||||||||+ ++|++ +||+|||||||||||| .|+|+|+|||+++. .
T Consensus 38 ~~~~~~~~~~~sGy~~v~~~~~~~~lFyw~~~s~---~~~~~-~Pl~lwlnGGPG~ss~-~G~f~E~GP~~i~~~~~~~~ 112 (462)
T PTZ00472 38 WAPCDPSVNQWSGYFDIPGNQTDKHYFYWAFGPR---NGNPE-APVLLWMTGGPGCSSM-FALLAENGPCLMNETTGDIY 112 (462)
T ss_pred ccccCCCCcceeEEEEeCCCCCCceEEEEEEEcC---CCCCC-CCEEEEECCCCcHHHH-HhhhccCCCeEEeCCCCcee
Confidence 5666778999999999964 579999999985 46755 5999999999999999 89999999999863 4
Q ss_pred CCccchhccccceeecCCcccccCCccCCCCcccchHHHHHHHHHHHHHHHHhccccCCCCEEEEecccCcchhHHHHHH
Q 012900 99 PRNSTWLKKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLA 178 (454)
Q Consensus 99 ~n~~SW~~~anvLfiDqPvGtGfSy~~~~~~~~~~~~~~A~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~lA~~ 178 (454)
.|++||++.+||||||||+||||||+... ....+++++|+|+++||+.||++||+++++|+||+||||||+|+|.+|.+
T Consensus 113 ~n~~sW~~~~~~l~iDqP~G~G~S~~~~~-~~~~~~~~~a~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~ 191 (462)
T PTZ00472 113 NNTYSWNNEAYVIYVDQPAGVGFSYADKA-DYDHNESEVSEDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYR 191 (462)
T ss_pred ECCcccccccCeEEEeCCCCcCcccCCCC-CCCCChHHHHHHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHH
Confidence 69999999999999999999999998754 35678899999999999999999999999999999999999999999999
Q ss_pred HHHHHHcC-CceeeeeeeEecccCCCchhhhhhccccccc-------CCCCChhHHHHHHHHHHHHHHHhhcCCCcc---
Q 012900 179 AVKAIEAG-KLKLKLGGVALGDSWISPEDFVFSWGPLLKD-------MSRLDTNGFAKSNQIAQKIKQQLEAGEFVG--- 247 (454)
Q Consensus 179 i~~~~~~~-~~~inLkGi~iGNg~~~p~~~~~~~~~~~~~-------~glid~~~~~~~~~~~~~~~~~~~~~~~~~--- 247 (454)
|+++|+++ ..+||||||+|||||+||..|+.++.+|++. .|+|++..++.+++..+.|++.++.|+...
T Consensus 192 i~~~n~~~~~~~inLkGi~IGNg~~dp~~q~~~~~~~a~~~~~~~~~~~li~~~~~~~~~~~~~~c~~~~~~c~~~~~~~ 271 (462)
T PTZ00472 192 INMGNKKGDGLYINLAGLAVGNGLTDPYTQYASYPRLAWDWCKEKLGAPCVSEEAYDEMSSMVPACQKKIKECNSNPDDA 271 (462)
T ss_pred HHhhccccCCceeeeEEEEEeccccChhhhcccHHHHhhhcccccCCCCccCHHHHHHHHHHHHHHHHHHHhccccCCCc
Confidence 99987654 3789999999999999999999999999985 589999999999888888888777776421
Q ss_pred ------hhhHHHHHHHHHHhhCCCccchhcccccCCCCccccccccccccccchhhhcccccCCCCCCCCchhhhhccH-
Q 012900 248 ------ATDSWAQLESVISQNSNAVDFYNFLLDSGMDPVSLTASTLAVGASMRKYSRYLSAHKSSTPDGDGDVGSLMNG- 320 (454)
Q Consensus 248 ------a~~~~~~~~~~~~~~~~~~n~ydi~~~~~~~p~~~~~~~~~~~~~~~~~~~yl~~~~~~~p~~~~~i~~~lN~- 320 (454)
+...|..+...+. ..++|+||++.+|.. +. ++ ....++.|||+
T Consensus 272 ~~~c~~a~~~c~~~~~~~~--~~g~n~Ydi~~~c~~-~~--------------c~-------------~~~~~~~yLN~~ 321 (462)
T PTZ00472 272 DSSCSVARALCNEYIAVYS--ATGLNNYDIRKPCIG-PL--------------CY-------------NMDNTIAFMNRE 321 (462)
T ss_pred chHHHHHHHHHHHHHHHHH--hcCCChhheeccCCC-CC--------------cc-------------CHHHHHHHhCCH
Confidence 1223444333222 467899999876521 10 00 01356789998
Q ss_pred HHHHHhccCCCCccccccChhhhhhccCCCCccchHHHHHHhhcCceEEEEeccCCCCCChhhHHHHHHhcccccccccc
Q 012900 321 VIKKKLKIIPENITWGGQSDSVFTELSGDFMRPRISEVDELLAKGVNVTVYNGQLDVICSTKGTEAWIEKLKWDGLQKFL 400 (454)
Q Consensus 321 ~V~~aL~i~~~~~~w~~cs~~v~~~~~~D~~~~~~~~l~~LL~~~irVLiy~Gd~D~i~n~~G~~~~i~~L~W~g~~~f~ 400 (454)
+||++||+. ..+|+.|++.|+..+..|+++++.+.|+.||++|+|||||+||.|++||+.|+++|+++|+|+++++|+
T Consensus 322 ~Vq~AL~v~--~~~w~~c~~~V~~~~~~D~~~~~~~~l~~LL~~gikVLiYnGd~D~icn~~Gt~~wi~~L~w~g~~~f~ 399 (462)
T PTZ00472 322 DVQSSLGVK--PATWQSCNMEVNLMFEMDWMKNFNYTVPGLLEDGVRVMIYAGDMDFICNWIGNKAWTLALQWPGNAEFN 399 (462)
T ss_pred HHHHHhCCC--CCCceeCCHHHHHHhhhccccchHHHHHHHHhcCceEEEEECCcCeecCcHhHHHHHHhCCCCCccchh
Confidence 599999985 358999999999999889999999999999999999999999999999999999999999999999999
Q ss_pred cCCceeeEeCCCceeeeEEEEEc-----CeEEEEEcCCcccccccCChhhhh
Q 012900 401 STERTPLFCGNDKITKGFKKSYK-----NLHFYWILGAGHFKNYCDTWSGKR 447 (454)
Q Consensus 401 ~a~~~~w~~~~~~~~~G~~k~~~-----nLtf~~V~~AGHmvP~dqP~~~~~ 447 (454)
+++|+||+. .+++++||+|+++ ||+|++|++||||||+|||+++++
T Consensus 400 ~a~~~~w~~-~~~~v~G~vk~~~~~~~~~l~~~~V~~AGH~vp~d~P~~~~~ 450 (462)
T PTZ00472 400 AAPDVPFSA-VDGRWAGLVRSAASNTSSGFSFVQVYNAGHMVPMDQPAVALT 450 (462)
T ss_pred hcCccccEe-cCCEeceEEEEEecccCCCeEEEEECCCCccChhhHHHHHHH
Confidence 999999953 2357899999999 999999999999999999999875
No 4
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=100.00 E-value=2e-92 Score=717.57 Aligned_cols=375 Identities=20% Similarity=0.334 Sum_probs=302.2
Q ss_pred CCCCceeeEEEEecC--CceEEEEEEEcCCCCCCCCCCCCEEEEEcCCCChhhhhhccccccCCCccc----------CC
Q 012900 31 NQDASEEWGYVEVRP--KAHMFWWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPFDTY----------LK 98 (454)
Q Consensus 31 ~~~~~~~sGyv~v~~--~~~lfywf~es~~~~~~p~~~~PlilWlnGGPGcSS~~~G~f~E~GP~~~~----------~~ 98 (454)
..+++++|||++|++ +.++|||||||+ ++|++ +||||||||||||||+ .|+|+|+|||+++ +.
T Consensus 32 ~~~~~~~sGy~~v~~~~~~~lfy~f~es~---~~~~~-~P~~lWlnGGPG~SS~-~g~~~e~GP~~~~~~~~~~~~~~l~ 106 (433)
T PLN03016 32 PLPFELETGYIGIGEDENVQFFYYFIKSE---NNPKE-DPLLIWLNGGPGCSCL-GGIIFENGPVGLKFEVFNGSAPSLF 106 (433)
T ss_pred CCCeeEEEEEEEecCCCCeEEEEEEEecC---CCccc-CCEEEEEcCCCcHHHH-HHHHHhcCCceeeccccCCCCCcee
Confidence 456899999999976 478999999985 46755 4999999999999999 7999999999863 35
Q ss_pred CCccchhccccceeecCCcccccCCccCCCCcccchHHHHHHHHHHHHHHHHhccccCCCCEEEEecccCcchhHHHHHH
Q 012900 99 PRNSTWLKKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLA 178 (454)
Q Consensus 99 ~n~~SW~~~anvLfiDqPvGtGfSy~~~~~~~~~~~~~~A~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~lA~~ 178 (454)
+|++||++.|||||||||+||||||+++.... .+++++|+++++||++||++||+|+++||||+||||||||||.+|++
T Consensus 107 ~n~~sW~~~anllfiDqPvGtGfSy~~~~~~~-~~d~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~la~~ 185 (433)
T PLN03016 107 STTYSWTKMANIIFLDQPVGSGFSYSKTPIDK-TGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQE 185 (433)
T ss_pred eCCCchhhcCcEEEecCCCCCCccCCCCCCCc-cCCHHHHHHHHHHHHHHHHhChhhcCCCEEEEccCccceehHHHHHH
Confidence 69999999999999999999999998765443 45666779999999999999999999999999999999999999999
Q ss_pred HHHHHHc-CCceeeeeeeEecccCCCchhhhhhcccccccCCCCChhHHHHHHHHHHHHHHHhhcCCCcchhhHHHHHHH
Q 012900 179 AVKAIEA-GKLKLKLGGVALGDSWISPEDFVFSWGPLLKDMSRLDTNGFAKSNQIAQKIKQQLEAGEFVGATDSWAQLES 257 (454)
Q Consensus 179 i~~~~~~-~~~~inLkGi~iGNg~~~p~~~~~~~~~~~~~~glid~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~ 257 (454)
|+++|++ ...+||||||+||||+++|..+..++.+|++.+|+|++++++.+++.++.+ .. ....+...|..+..
T Consensus 186 i~~~n~~~~~~~inLkGi~iGNg~t~~~~~~~~~~~y~~~~glI~~~~~~~i~~~c~~~---~~--~~~~~~~~C~~~~~ 260 (433)
T PLN03016 186 ISQGNYICCEPPINLQGYMLGNPVTYMDFEQNFRIPYAYGMGLISDEIYEPMKRICNGN---YY--NVDPSNTQCLKLTE 260 (433)
T ss_pred HHhhcccccCCcccceeeEecCCCcCchhhhhhHHHHHHhcCCCCHHHHHHHHHHhccc---cc--cCCCchHHHHHHHH
Confidence 9987753 246899999999999999999999999999999999998876655543221 11 11234556777766
Q ss_pred HHHhhCCCccchhcccccCCCCccccccccccccccchhhhcccccCCCCCCCCchhhhhccH-HHHHHhccCCC-Cccc
Q 012900 258 VISQNSNAVDFYNFLLDSGMDPVSLTASTLAVGASMRKYSRYLSAHKSSTPDGDGDVGSLMNG-VIKKKLKIIPE-NITW 335 (454)
Q Consensus 258 ~~~~~~~~~n~ydi~~~~~~~p~~~~~~~~~~~~~~~~~~~yl~~~~~~~p~~~~~i~~~lN~-~V~~aL~i~~~-~~~w 335 (454)
.+.+..+.+|.||++.++|. +...+ ...++ +.....++.|||+ +||++||+.+. ..+|
T Consensus 261 ~~~~~~~~~n~yni~~~~~~-~~~~~--------~~~c~-----------~~~~~~~~~ylN~~~V~~aL~v~~~~~~~w 320 (433)
T PLN03016 261 EYHKCTAKINIHHILTPDCD-VTNVT--------SPDCY-----------YYPYHLIECWANDESVREALHIEKGSKGKW 320 (433)
T ss_pred HHHHHhcCCChhhccCCccc-ccccC--------CCccc-----------ccchHHHHHHhCCHHHHHHhCCCCCCCCCC
Confidence 66667788999999865442 11110 00000 0001356789998 69999998653 4689
Q ss_pred cccChhhhhhccCCCCccchHHHHHHhhcCceEEEEeccCCCCCChhhHHHHHHhcccccccccccCCceeeEeCCCcee
Q 012900 336 GGQSDSVFTELSGDFMRPRISEVDELLAKGVNVTVYNGQLDVICSTKGTEAWIEKLKWDGLQKFLSTERTPLFCGNDKIT 415 (454)
Q Consensus 336 ~~cs~~v~~~~~~D~~~~~~~~l~~LL~~~irVLiy~Gd~D~i~n~~G~~~~i~~L~W~g~~~f~~a~~~~w~~~~~~~~ 415 (454)
..|+..|. +..|.+.+ .+.+..++.+|+|||||+||.|++||+.||++|+++|+|++.+.| +||+++ +++
T Consensus 321 ~~cn~~v~--~~~d~~~~-~~~~~~~l~~~irVLiY~Gd~D~icn~~Gt~~wi~~L~w~~~~~~-----~~w~~~--~~~ 390 (433)
T PLN03016 321 ARCNRTIP--YNHDIVSS-IPYHMNNSISGYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNW-----RPWMIN--NQI 390 (433)
T ss_pred ccCCcccc--cccccchh-hHHHHHHHhcCceEEEEECCccccCCcHhHHHHHHhCCCCCCCCc-----ccccCC--CEe
Confidence 99999886 44565543 333444556789999999999999999999999999999998764 689753 579
Q ss_pred eeEEEEEcC-eEEEEEcCCcccccccCChhhhh
Q 012900 416 KGFKKSYKN-LHFYWILGAGHFKNYCDTWSGKR 447 (454)
Q Consensus 416 ~G~~k~~~n-Ltf~~V~~AGHmvP~dqP~~~~~ 447 (454)
+||+|+|+| |||++|++|||||| |||++|++
T Consensus 391 ~G~vk~y~n~ltfv~V~~AGHmVp-~qP~~al~ 422 (433)
T PLN03016 391 AGYTRAYSNKMTFATIKAGGHTAE-YRPNETFI 422 (433)
T ss_pred eeEEEEeCCceEEEEEcCCCCCCC-CCHHHHHH
Confidence 999999986 99999999999998 79999985
No 5
>PLN02209 serine carboxypeptidase
Probab=100.00 E-value=3.4e-90 Score=701.13 Aligned_cols=375 Identities=21% Similarity=0.343 Sum_probs=293.5
Q ss_pred CCCCCceeeEEEEecC--CceEEEEEEEcCCCCCCCCCCCCEEEEEcCCCChhhhhhccccccCCCccc----------C
Q 012900 30 KNQDASEEWGYVEVRP--KAHMFWWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPFDTY----------L 97 (454)
Q Consensus 30 ~~~~~~~~sGyv~v~~--~~~lfywf~es~~~~~~p~~~~PlilWlnGGPGcSS~~~G~f~E~GP~~~~----------~ 97 (454)
++.+++++|||++|++ ++++|||||||+ ++|++ +||+|||||||||||+ .|+|.|+|||+++ +
T Consensus 33 ~~~~~~~~sGy~~v~~~~~~~lf~~f~es~---~~~~~-~Pl~lWlnGGPG~SS~-~g~f~e~GP~~~~~~~~~~~~~~l 107 (437)
T PLN02209 33 GPLPFELETGYIGIGEEENVQFFYYFIKSD---KNPQE-DPLIIWLNGGPGCSCL-SGLFFENGPLALKNKVYNGSVPSL 107 (437)
T ss_pred CCCCeeEEEEEEEecCCCCeEEEEEEEecC---CCCCC-CCEEEEECCCCcHHHh-hhHHHhcCCceeccCCCCCCcccc
Confidence 3467899999999976 468999999985 46755 4999999999999999 8999999999974 3
Q ss_pred CCCccchhccccceeecCCcccccCCccCCCCcccchHHHHHHHHHHHHHHHHhccccCCCCEEEEecccCcchhHHHHH
Q 012900 98 KPRNSTWLKKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGL 177 (454)
Q Consensus 98 ~~n~~SW~~~anvLfiDqPvGtGfSy~~~~~~~~~~~~~~A~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~lA~ 177 (454)
.+|+|||++.|||||||||+||||||+.+.... .+++++|+|+++||++||++||+|+++||||+||||||||||.+|.
T Consensus 108 ~~n~~sW~~~anllfiDqPvGtGfSy~~~~~~~-~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~~a~ 186 (437)
T PLN02209 108 VSTTYSWTKTANIIFLDQPVGSGFSYSKTPIER-TSDTSEVKKIHEFLQKWLIKHPQFLSNPFYVVGDSYSGMIVPALVH 186 (437)
T ss_pred eeCCCchhhcCcEEEecCCCCCCccCCCCCCCc-cCCHHHHHHHHHHHHHHHHhCccccCCCEEEEecCcCceehHHHHH
Confidence 469999999999999999999999998765444 4556778999999999999999999999999999999999999999
Q ss_pred HHHHHHHc-CCceeeeeeeEecccCCCchhhhhhcccccccCCCCChhHHHHHHHHHHHHHHHhhcCCCcchhhHHHHHH
Q 012900 178 AAVKAIEA-GKLKLKLGGVALGDSWISPEDFVFSWGPLLKDMSRLDTNGFAKSNQIAQKIKQQLEAGEFVGATDSWAQLE 256 (454)
Q Consensus 178 ~i~~~~~~-~~~~inLkGi~iGNg~~~p~~~~~~~~~~~~~~glid~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~ 256 (454)
+|++++++ ...+||||||+|||||+||..+..++.+|++.+|+|++++++.+++.+.. +.. ........|.++.
T Consensus 187 ~i~~~~~~~~~~~inl~Gi~igng~td~~~q~~~~~~y~~~~glI~~~~~~~~~~~c~~---~~~--~~~~~~~~C~~~i 261 (437)
T PLN02209 187 EISKGNYICCNPPINLQGYVLGNPITHIEFEQNFRIPYAHGMSLISDELYESLKRICKG---NYF--SVDPSNKKCLKLV 261 (437)
T ss_pred HHHhhcccccCCceeeeeEEecCcccChhhhhhhHHHHHhccCCCCHHHHHHHHHhccc---ccc--cCCCChHHHHHHH
Confidence 99987643 34589999999999999999999999999999999999887766553221 100 0112234465554
Q ss_pred HHHHhhCCCccchhcccccCCCCccccccccccccccchhhhcccccCCCCCCC---CchhhhhccH-HHHHHhccCCCC
Q 012900 257 SVISQNSNAVDFYNFLLDSGMDPVSLTASTLAVGASMRKYSRYLSAHKSSTPDG---DGDVGSLMNG-VIKKKLKIIPEN 332 (454)
Q Consensus 257 ~~~~~~~~~~n~ydi~~~~~~~p~~~~~~~~~~~~~~~~~~~yl~~~~~~~p~~---~~~i~~~lN~-~V~~aL~i~~~~ 332 (454)
.........++.|+++...|.... .+.+. .+|. ...+..|||+ +||++||+....
T Consensus 262 ~~~~~~~~~~~~~~~~~~~c~~~~-----------------~~~~~----~~c~~~~~~~~~~ylN~~~V~~aL~v~~~~ 320 (437)
T PLN02209 262 EEYHKCTDNINSHHTLIANCDDSN-----------------TQHIS----PDCYYYPYHLVECWANNESVREALHVDKGS 320 (437)
T ss_pred HHHHHHhhcCCccccccccccccc-----------------cccCC----CCcccccHHHHHHHhCCHHHHHHhCCCCCC
Confidence 444444555666664433221100 00000 0121 1357889999 599999985322
Q ss_pred -ccccccChhhhhhccCCCCccchHHHHHHhhcCceEEEEeccCCCCCChhhHHHHHHhcccccccccccCCceeeEeCC
Q 012900 333 -ITWGGQSDSVFTELSGDFMRPRISEVDELLAKGVNVTVYNGQLDVICSTKGTEAWIEKLKWDGLQKFLSTERTPLFCGN 411 (454)
Q Consensus 333 -~~w~~cs~~v~~~~~~D~~~~~~~~l~~LL~~~irVLiy~Gd~D~i~n~~G~~~~i~~L~W~g~~~f~~a~~~~w~~~~ 411 (454)
..|..|+..+ .+..|.+.+....+ .+|++|+|||||+||.|++||+.||++|+++|+|++++.| +||+++
T Consensus 321 ~~~w~~~~~~~--~~~~d~~~~~~~~~-~~l~~girVLiY~GD~D~icn~~Gte~wi~~L~w~~~~~~-----~~w~~~- 391 (437)
T PLN02209 321 IGEWIRDHRGI--PYKSDIRSSIPYHM-NNSINGYRSLIFSGDHDITMPFQATQAWIKSLNYSIIDDW-----RPWMIK- 391 (437)
T ss_pred CCCCccccchh--hcccchhhhHHHHH-HHHhcCceEEEEECCccccCCcHhHHHHHHhcCCccCCCe-----eeeEEC-
Confidence 3699998755 34556665433333 4555789999999999999999999999999999998765 699874
Q ss_pred CceeeeEEEEEcC-eEEEEEcCCcccccccCChhhhh
Q 012900 412 DKITKGFKKSYKN-LHFYWILGAGHFKNYCDTWSGKR 447 (454)
Q Consensus 412 ~~~~~G~~k~~~n-Ltf~~V~~AGHmvP~dqP~~~~~ 447 (454)
++++||+|+|+| |||++|++|||||| |||++|++
T Consensus 392 -~q~aG~vk~y~n~Ltfv~V~~AGHmVp-~qP~~al~ 426 (437)
T PLN02209 392 -GQIAGYTRTYSNKMTFATVKGGGHTAE-YLPEESSI 426 (437)
T ss_pred -CEeeeEEEEeCCceEEEEEcCCCCCcC-cCHHHHHH
Confidence 579999999996 99999999999998 79999985
No 6
>KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=3.1e-84 Score=600.20 Aligned_cols=405 Identities=51% Similarity=0.900 Sum_probs=364.9
Q ss_pred ceeeEEEEecCCceEEEEEEEcCCCCCCCCCCCCEEEEEcCCCChhhhhhccccccCCCcccCCCCccchhccccceeec
Q 012900 35 SEEWGYVEVRPKAHMFWWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLKKADLLFVD 114 (454)
Q Consensus 35 ~~~sGyv~v~~~~~lfywf~es~~~~~~p~~~~PlilWlnGGPGcSS~~~G~f~E~GP~~~~~~~n~~SW~~~anvLfiD 114 (454)
.+-+||++|+.++|+|||.|.++... . ..+||.|||+||||.||.++|+|+|+||...++++|+.+|-+.|+|||||
T Consensus 2 d~~wg~v~vr~~a~~F~wly~~~~~~--k-s~~pl~lwlqGgpGaSstG~GNFeE~GPl~~~~~~r~~TWlk~adllfvD 78 (414)
T KOG1283|consen 2 DEDWGYVDVRTGAHMFWWLYYATANV--K-SERPLALWLQGGPGASSTGFGNFEELGPLDLDGSPRDWTWLKDADLLFVD 78 (414)
T ss_pred CccccceeeecCceEEEEEeeecccc--c-cCCCeeEEecCCCCCCCcCccchhhcCCcccCCCcCCchhhhhccEEEec
Confidence 45689999999999999999986432 2 34599999999999999999999999999999999999999999999999
Q ss_pred CCcccccCCccCCCCcccchHHHHHHHHHHHHHHHHhccccCCCCEEEEecccCcchhHHHHHHHHHHHHcCCceeeeee
Q 012900 115 NPVGTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGG 194 (454)
Q Consensus 115 qPvGtGfSy~~~~~~~~~~~~~~A~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkG 194 (454)
.|||+||||.+..+.++++.+++|.|+.+.|++||..||||+.+||||+-|||||+..+.+|..+.+.++.++++.|+.|
T Consensus 79 nPVGaGfSyVdg~~~Y~~~~~qia~Dl~~llk~f~~~h~e~~t~P~~If~ESYGGKma~k~al~l~~aIk~G~i~~nf~~ 158 (414)
T KOG1283|consen 79 NPVGAGFSYVDGSSAYTTNNKQIALDLVELLKGFFTNHPEFKTVPLYIFCESYGGKMAAKFALELDDAIKRGEIKLNFIG 158 (414)
T ss_pred CCCcCceeeecCcccccccHHHHHHHHHHHHHHHHhcCccccccceEEEEhhcccchhhhhhhhHHHHHhcCceeeccee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEecccCCCchhhhhhcccccccCCCCChhHHHHHHHHHHHHHHHhhcCCCcchhhHHHHHHHHHHhhCCCccchhcccc
Q 012900 195 VALGDSWISPEDFVFSWGPLLKDMSRLDTNGFAKSNQIAQKIKQQLEAGEFVGATDSWAQLESVISQNSNAVDFYNFLLD 274 (454)
Q Consensus 195 i~iGNg~~~p~~~~~~~~~~~~~~glid~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~n~ydi~~~ 274 (454)
++||+.||+|.+...++.|||++++++|+++.+..++.++.|+..++.+.+..+...+...++.+..++.+++.|||+.+
T Consensus 159 VaLGDSWISP~D~V~SWGP~L~~~S~LDD~GLds~ns~A~k~~~~v~~g~~~~AT~~Wg~~e~li~~~sn~VdfYNil~~ 238 (414)
T KOG1283|consen 159 VALGDSWISPEDFVFSWGPLLKHVSRLDDNGLDSSNSGAEKGKGGVDGGKWGGATGGWGGGENLISRESNGVDFYNILTK 238 (414)
T ss_pred EEccCcccChhHhhhcchHHHHhhhhhcccCccchhhhHHhhcccccCCccccccccccCcCcceeecccCcceeeeecc
Confidence 99999999999999999999999999999999999999999999999999999988887788888889999999999999
Q ss_pred cCCCCccccccccccccccchhhhcccccCCCCCCCCchhhhhccHHHHHHhccCCCCccccccChhhhhhccCCCCccc
Q 012900 275 SGMDPVSLTASTLAVGASMRKYSRYLSAHKSSTPDGDGDVGSLMNGVIKKKLKIIPENITWGGQSDSVFTELSGDFMRPR 354 (454)
Q Consensus 275 ~~~~p~~~~~~~~~~~~~~~~~~~yl~~~~~~~p~~~~~i~~~lN~~V~~aL~i~~~~~~w~~cs~~v~~~~~~D~~~~~ 354 (454)
...+++..+....+ ....+.+++.... ..+...+.++++||.+||++|+|+|..+.|-..+.+|+..+.+|+|+|+
T Consensus 239 t~~d~~~~ss~~~~---~~~~~~rrl~~~~-~~~~~~D~L~~lM~g~vrkkLgIip~~~~wGgqsg~vFt~lq~dFMKPv 314 (414)
T KOG1283|consen 239 TLGDQYSLSSRAAM---TPEEVMRRLLVRF-VGDEDRDKLSDLMNGPVRKKLGIIPGGVKWGGQSGDVFTKLQGDFMKPV 314 (414)
T ss_pred CCCcchhhhhhhhc---chHHHHHHHHhcc-CcchhHHHHHHHhcccccccccccCCCCcccCcCCchHHHhhhhhcccH
Confidence 88887665433221 1223333332210 1112235689999999999999999999999999999999999999999
Q ss_pred hHHHHHHhhcCceEEEEeccCCCCCChhhHHHHHHhcccccccccccCCceeeEeCCCceeeeEEEEEcCeEEEEEcCCc
Q 012900 355 ISEVDELLAKGVNVTVYNGQLDVICSTKGTEAWIEKLKWDGLQKFLSTERTPLFCGNDKITKGFKKSYKNLHFYWILGAG 434 (454)
Q Consensus 355 ~~~l~~LL~~~irVLiy~Gd~D~i~n~~G~~~~i~~L~W~g~~~f~~a~~~~w~~~~~~~~~G~~k~~~nLtf~~V~~AG 434 (454)
...+.+||+.|++|.||+|++|.||++.|+++|+.+|+|++...|+..+|.-++. +...+||.|+|+||.|.+|..||
T Consensus 315 i~~VdeLL~~Gv~V~VynG~lDlIc~T~G~~AWv~~l~w~~~p~f~~~~r~~~~~--s~~l~gy~ktyknl~f~wilrag 392 (414)
T KOG1283|consen 315 ISKVDELLNNGVNVTVYNGQLDLICATMGTEAWVEKLEWSAKPSFQVSPRVGITV--SRVLEGYEKTYKNLSFFWILRAG 392 (414)
T ss_pred HHHHHHHHhCCceEEEEecccchhhcccchhhhhhheecCCCCccccceeeeccc--eeecchhhhhhccceeEEeeccc
Confidence 9999999999999999999999999999999999999999999999988877764 45679999999999999999999
Q ss_pred ccccccCChhhhhc
Q 012900 435 HFKNYCDTWSGKRG 448 (454)
Q Consensus 435 HmvP~dqP~~~~~~ 448 (454)
||||.|+|++|..+
T Consensus 393 hmvp~Dnp~~a~hm 406 (414)
T KOG1283|consen 393 HMVPADNPAAASHM 406 (414)
T ss_pred CcccCCCHHHHhhh
Confidence 99999999998754
No 7
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=100.00 E-value=3.6e-69 Score=531.41 Aligned_cols=304 Identities=17% Similarity=0.259 Sum_probs=238.5
Q ss_pred cccceeecCCcccccCCccCCCCcccchHHHHHHHHHHHHHHHHhccccCCCCEEEEecccCcchhHHHHHHHHHHHHc-
Q 012900 107 KADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEA- 185 (454)
Q Consensus 107 ~anvLfiDqPvGtGfSy~~~~~~~~~~~~~~A~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~- 185 (454)
.|||||||||+||||||+++.... .+++++|+|++.||+.||++||+|+++||||+||||||||||.+|.+|++.|.+
T Consensus 1 ~aNvLfiDqPvGvGfSy~~~~~~~-~~d~~~a~d~~~fL~~Ff~~~p~~~~~~fyI~GESYaG~YiP~la~~I~~~n~~~ 79 (319)
T PLN02213 1 MANIIFLDQPVGSGFSYSKTPIDK-TGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYIC 79 (319)
T ss_pred CccEEEecCCCCCCCCCCCCCCCc-cccHHHHHHHHHHHHHHHHhCcccccCCeEEEeeccccchHHHHHHHHHhhcccc
Confidence 489999999999999998765443 456667799999999999999999999999999999999999999999987653
Q ss_pred CCceeeeeeeEecccCCCchhhhhhcccccccCCCCChhHHHHHHHHHHHHHHHhhcCCCcchhhHHHHHHHHHHhhCCC
Q 012900 186 GKLKLKLGGVALGDSWISPEDFVFSWGPLLKDMSRLDTNGFAKSNQIAQKIKQQLEAGEFVGATDSWAQLESVISQNSNA 265 (454)
Q Consensus 186 ~~~~inLkGi~iGNg~~~p~~~~~~~~~~~~~~glid~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~ 265 (454)
+..+||||||+|||||++|..+..++.+|++.+|+|++++++.+++.+..+ .. ....+...|.++...+....+.
T Consensus 80 ~~~~inLkGi~IGNg~t~~~~~~~~~~~~~~~~gli~~~~~~~~~~~c~~~---~~--~~~~~~~~c~~~~~~~~~~~~~ 154 (319)
T PLN02213 80 CEPPINLQGYMLGNPVTYMDFEQNFRIPYAYGMGLISDEIYEPMKRICNGN---YY--NVDPSNTQCLKLTEEYHKCTAK 154 (319)
T ss_pred cCCceeeeEEEeCCCCCCccccchhHhhHHHhcCCCCHHHHHHHHHhcCCC---cc--CCCCCcHHHHHHHHHHHHHHhc
Confidence 346799999999999999999999999999999999998877655432211 10 1112345677766656666778
Q ss_pred ccchhcccccCCCCccccccccccccccchhhhcccccCCCCCCCCchhhhhccH-HHHHHhccCCC-CccccccChhhh
Q 012900 266 VDFYNFLLDSGMDPVSLTASTLAVGASMRKYSRYLSAHKSSTPDGDGDVGSLMNG-VIKKKLKIIPE-NITWGGQSDSVF 343 (454)
Q Consensus 266 ~n~ydi~~~~~~~p~~~~~~~~~~~~~~~~~~~yl~~~~~~~p~~~~~i~~~lN~-~V~~aL~i~~~-~~~w~~cs~~v~ 343 (454)
+|.||++.++|. +...+ ...++ +.....++.|||+ +||++||+.+. +.+|..||..|.
T Consensus 155 ~~~~~~~~~~~~-~~~~~--------~~~c~-----------~~~~~~~~~ylN~~~V~~aL~v~~~~~~~w~~c~~~v~ 214 (319)
T PLN02213 155 INIHHILTPDCD-VTNVT--------SPDCY-----------YYPYHLIECWANDESVREALHIEKGSKGKWARCNRTIP 214 (319)
T ss_pred CCHhhcccCccc-CccCC--------CCCcc-----------cchhHHHHHHhCCHHHHHHhCcCCCCCCCCccCCcccc
Confidence 899998855432 11100 00000 0012357889998 69999998653 468999999886
Q ss_pred hhccCCCCccchHHHHHHhhcCceEEEEeccCCCCCChhhHHHHHHhcccccccccccCCceeeEeCCCceeeeEEEEEc
Q 012900 344 TELSGDFMRPRISEVDELLAKGVNVTVYNGQLDVICSTKGTEAWIEKLKWDGLQKFLSTERTPLFCGNDKITKGFKKSYK 423 (454)
Q Consensus 344 ~~~~~D~~~~~~~~l~~LL~~~irVLiy~Gd~D~i~n~~G~~~~i~~L~W~g~~~f~~a~~~~w~~~~~~~~~G~~k~~~ 423 (454)
+..|.+.+ .+.+..+|.+|+|||||+||.|++||+.|+++|+++|+|+++++ |+||+++ ++++||+|+|+
T Consensus 215 --~~~d~~~~-~~~~~~~l~~~i~VliY~Gd~D~icn~~g~~~wi~~L~w~~~~~-----~~~w~~~--~~~~G~vk~y~ 284 (319)
T PLN02213 215 --YNHDIVSS-IPYHMNNSISGYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHN-----WRPWMIN--NQIAGYTRAYS 284 (319)
T ss_pred --cccccccc-hHHHHHHHhcCceEEEEECCcCeeCCcHhHHHHHHhcCCCCCCC-----CccccCC--CEeeeEEEEec
Confidence 55666543 33333455578999999999999999999999999999999876 4699853 57899999998
Q ss_pred C-eEEEEEcCCcccccccCChhhhh
Q 012900 424 N-LHFYWILGAGHFKNYCDTWSGKR 447 (454)
Q Consensus 424 n-Ltf~~V~~AGHmvP~dqP~~~~~ 447 (454)
| |||++|++|||||| +||++|++
T Consensus 285 ~~ltf~~V~~AGHmV~-~qP~~al~ 308 (319)
T PLN02213 285 NKMTFATIKAGGHTAE-YRPNETFI 308 (319)
T ss_pred CcceEEEEcCCCCCCC-cCHHHHHH
Confidence 6 99999999999998 79999985
No 8
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=100.00 E-value=1.6e-68 Score=529.84 Aligned_cols=383 Identities=25% Similarity=0.413 Sum_probs=290.7
Q ss_pred CCCCceeeEEEEecCCceEEEEEEEcCCCCCCCCCCCCEEEEEcCCCChhhhhhccccccCCCcccCC------CCccch
Q 012900 31 NQDASEEWGYVEVRPKAHMFWWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPFDTYLK------PRNSTW 104 (454)
Q Consensus 31 ~~~~~~~sGyv~v~~~~~lfywf~es~~~~~~p~~~~PlilWlnGGPGcSS~~~G~f~E~GP~~~~~~------~n~~SW 104 (454)
..+..+++||.++.+ .+|||+||++ ++|.+ +|+||||||||||||+ .|+|+|+||.+|+.. .||+||
T Consensus 71 ~lpv~~~~g~~d~ed--~~ffy~fe~~---ndp~~-rPvi~wlNGGPGcSS~-~g~l~elGP~rI~~~~~P~~~~NP~SW 143 (498)
T COG2939 71 ILPVRDYTGYPDAED--FFFFYTFESP---NDPAN-RPVIFWLNGGPGCSSV-TGLLGELGPKRIQSGTSPSYPDNPGSW 143 (498)
T ss_pred ccchhhccCCcccce--eEEEEEecCC---CCCCC-CceEEEecCCCChHhh-hhhhhhcCCeeeeCCCCCCCCCCcccc
Confidence 334456667754433 3999999973 46755 5999999999999999 899999999998643 399999
Q ss_pred hccccceeecCCcccccCCccCCCCcccchHHHHHHHHHHHHHHHHhccccCCC--CEEEEecccCcchhHHHHHHHHHH
Q 012900 105 LKKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKS--PLFIVAESYGGKFAATLGLAAVKA 182 (454)
Q Consensus 105 ~~~anvLfiDqPvGtGfSy~~~~~~~~~~~~~~A~d~~~fL~~F~~~fP~~~~~--~~yi~GESYgG~yvP~lA~~i~~~ 182 (454)
++++||||||||+|||||++. ++....+.+.+.+|++.|++.||+.||+|.+. |+||+||||||+|+|.||.+|+++
T Consensus 144 ~~~adLvFiDqPvGTGfS~a~-~~e~~~d~~~~~~D~~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~L~~~ 222 (498)
T COG2939 144 LDFADLVFIDQPVGTGFSRAL-GDEKKKDFEGAGKDVYSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHELLED 222 (498)
T ss_pred ccCCceEEEecCcccCccccc-ccccccchhccchhHHHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHHHHHHh
Confidence 999999999999999999983 33456788899999999999999999999887 999999999999999999999998
Q ss_pred HHcCCceeeeeeeEeccc-CCCchhhhhhcccccccCCCCChhH-HHHHHHHHHHHH-----HHhhcCCCcchhhHHHHH
Q 012900 183 IEAGKLKLKLGGVALGDS-WISPEDFVFSWGPLLKDMSRLDTNG-FAKSNQIAQKIK-----QQLEAGEFVGATDSWAQL 255 (454)
Q Consensus 183 ~~~~~~~inLkGi~iGNg-~~~p~~~~~~~~~~~~~~glid~~~-~~~~~~~~~~~~-----~~~~~~~~~~a~~~~~~~ 255 (454)
+...+-.+||++++|||| +|||..++..|.++++..+..+..- -..|+++.+.|+ .+++.+.-......|...
T Consensus 223 ~~~~~~~~nlssvligng~~t~Pl~~~~~y~~~a~~~~~~~~~l~~e~~~~~~~~~~~d~~~~l~~g~~~~~~~~~c~~~ 302 (498)
T COG2939 223 NIALNGNVNLSSVLIGNGLWTDPLTQYLTYEPIAAEKGPYDGVLSSEECTKAEKYCAGDYCLALMKGCYDSGSLQPCENA 302 (498)
T ss_pred ccccCCceEeeeeeecCCcccChhHHHHHhhhhHhhcCCCCCcCcHHHHHHHHHHhhhhhHhhhccCCCCchhhhHHHHH
Confidence 644445799999999999 9999999999999998655444211 133443333332 222222111122334332
Q ss_pred HHHHHh-------hCC--CccchhcccccCCCCccccccccccccccchhhhcccccCCCCCCCCchhhhhccH-HHHHH
Q 012900 256 ESVISQ-------NSN--AVDFYNFLLDSGMDPVSLTASTLAVGASMRKYSRYLSAHKSSTPDGDGDVGSLMNG-VIKKK 325 (454)
Q Consensus 256 ~~~~~~-------~~~--~~n~ydi~~~~~~~p~~~~~~~~~~~~~~~~~~~yl~~~~~~~p~~~~~i~~~lN~-~V~~a 325 (454)
...+.. ..+ ..|.||++..|. +|.. ...+|.. ...+.+++|. ++++.
T Consensus 303 ~~~~~~~~~~~~~r~~~~~~n~y~~r~~~~-d~g~----------~~~~y~~------------~~~~ld~~~~~~~~~~ 359 (498)
T COG2939 303 SAYLTGLMREYVGRAGGRLLNVYDIREECR-DPGL----------GGSCYDT------------LSTSLDYFNFDPEQEV 359 (498)
T ss_pred HHHHHhcchhhhccccccccccccchhhcC-CCCc----------ccccccc------------eeeccccccccchhcc
Confidence 222111 111 478888877663 2211 1112211 1223344443 45554
Q ss_pred hccCCCCccccccChhhhhhc---cCCCCccchHHHHHHhhcCceEEEEeccCCCCCChhhHHHHHHhcccccccccccC
Q 012900 326 LKIIPENITWGGQSDSVFTEL---SGDFMRPRISEVDELLAKGVNVTVYNGQLDVICSTKGTEAWIEKLKWDGLQKFLST 402 (454)
Q Consensus 326 L~i~~~~~~w~~cs~~v~~~~---~~D~~~~~~~~l~~LL~~~irVLiy~Gd~D~i~n~~G~~~~i~~L~W~g~~~f~~a 402 (454)
+. |....|..|+.++...| .++++.+....+..++.+++.+++|.||.|.+||+.|++.|..+|+|.+..+|..+
T Consensus 360 ~~--~~~d~~~~c~t~a~~~f~~~~~~~~~~~~~~~~~~lv~~~~~~~~~gd~d~icn~~~~~a~~~~Lkw~~~~g~~d~ 437 (498)
T COG2939 360 ND--PEVDNISGCTTDAMTDFLTFTGGWAKPSRYLVLNLLVNNVWILLYAGDKDFICNLRGNMALDPKLKWLGASGYFDA 437 (498)
T ss_pred cc--ccccchhccchHHHHhhhhhcCCcccccHHHHhhhhhcCCceeeeecCchhHhhhhhhcccCCcceEeeecchhhh
Confidence 43 34457999999998776 58899888888999999999999999999999999999999999999999999999
Q ss_pred CceeeEeCCCceeeeEEEEEcCeEEEEEcCCcccccccCChhhh
Q 012900 403 ERTPLFCGNDKITKGFKKSYKNLHFYWILGAGHFKNYCDTWSGK 446 (454)
Q Consensus 403 ~~~~w~~~~~~~~~G~~k~~~nLtf~~V~~AGHmvP~dqP~~~~ 446 (454)
.-.+|......+..|-+++++|++|+.+++||||||+|+|+++.
T Consensus 438 ~~~~~~~~~t~e~~~~~~s~~n~~~~r~y~aGHMvp~d~P~~~~ 481 (498)
T COG2939 438 STPFFWSRLTLEEMGGYKSYRNLTFLRIYEAGHMVPYDRPESSL 481 (498)
T ss_pred cCCCcccccchhhcccccccCCceEEEEecCcceeecCChHHHH
Confidence 88888764445678999999999999999999999999999875
No 9
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=98.90 E-value=1.8e-07 Score=89.46 Aligned_cols=130 Identities=21% Similarity=0.267 Sum_probs=81.8
Q ss_pred eeeEEEEecCCceEEEEEEEcCCCCCCCCCCCCEEEEEcCCCChhhhhhccccccCCCcccCCCCccchh-ccccceeec
Q 012900 36 EEWGYVEVRPKAHMFWWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWL-KKADLLFVD 114 (454)
Q Consensus 36 ~~sGyv~v~~~~~lfywf~es~~~~~~p~~~~PlilWlnGGPGcSS~~~G~f~E~GP~~~~~~~n~~SW~-~~anvLfiD 114 (454)
+.+++++++.. .+.|.-+. .+.+ .|.||+++||||+++.....+. + .-. +..+++-+|
T Consensus 2 ~~~~~~~~~~~-~~~~~~~~------~~~~-~~~vl~~hG~~g~~~~~~~~~~------------~-~l~~~g~~vi~~d 60 (288)
T TIGR01250 2 QIEGIITVDGG-YHLFTKTG------GEGE-KIKLLLLHGGPGMSHEYLENLR------------E-LLKEEGREVIMYD 60 (288)
T ss_pred CccceecCCCC-eEEEEecc------CCCC-CCeEEEEcCCCCccHHHHHHHH------------H-HHHhcCCEEEEEc
Confidence 34567777643 44433332 1112 3788999999999875322111 0 011 248899999
Q ss_pred CCcccccCCccCCCCcccchHHHHHHHHHHHHHHHHhccccCCCCEEEEecccCcchhHHHHHHHHHHHHcCCceeeeee
Q 012900 115 NPVGTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGG 194 (454)
Q Consensus 115 qPvGtGfSy~~~~~~~~~~~~~~A~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkG 194 (454)
.| |.|.|..........+.++.++++..+++. +..++++|.|+|+||..+..+|.+- +-.+++
T Consensus 61 ~~-G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~liG~S~Gg~ia~~~a~~~---------p~~v~~ 123 (288)
T TIGR01250 61 QL-GCGYSDQPDDSDELWTIDYFVDELEEVREK-------LGLDKFYLLGHSWGGMLAQEYALKY---------GQHLKG 123 (288)
T ss_pred CC-CCCCCCCCCcccccccHHHHHHHHHHHHHH-------cCCCcEEEEEeehHHHHHHHHHHhC---------ccccce
Confidence 99 999986432211124567777777665543 2345699999999999988887532 235788
Q ss_pred eEecccCCC
Q 012900 195 VALGDSWIS 203 (454)
Q Consensus 195 i~iGNg~~~ 203 (454)
+++.++...
T Consensus 124 lvl~~~~~~ 132 (288)
T TIGR01250 124 LIISSMLDS 132 (288)
T ss_pred eeEeccccc
Confidence 888776553
No 10
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=98.88 E-value=6.3e-08 Score=91.28 Aligned_cols=104 Identities=21% Similarity=0.229 Sum_probs=72.8
Q ss_pred CCEEEEEcCCCChhhhhhccccccCCCcccCCCCccchhccccceeecCCcccccCCccCCCCcccchHHHHHHHHHHHH
Q 012900 67 WPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLKKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLM 146 (454)
Q Consensus 67 ~PlilWlnGGPGcSS~~~G~f~E~GP~~~~~~~n~~SW~~~anvLfiDqPvGtGfSy~~~~~~~~~~~~~~A~d~~~fL~ 146 (454)
.|+||+++|.+|.+.++ ..+. .-+.+..+++-+|.| |.|.|..... ...+.++.++++.++++
T Consensus 13 ~~~iv~lhG~~~~~~~~-~~~~-------------~~l~~~~~vi~~D~~-G~G~S~~~~~--~~~~~~~~~~~~~~~i~ 75 (257)
T TIGR03611 13 APVVVLSSGLGGSGSYW-APQL-------------DVLTQRFHVVTYDHR-GTGRSPGELP--PGYSIAHMADDVLQLLD 75 (257)
T ss_pred CCEEEEEcCCCcchhHH-HHHH-------------HHHHhccEEEEEcCC-CCCCCCCCCc--ccCCHHHHHHHHHHHHH
Confidence 49999999988877653 2111 123456899999999 9999964322 23466777787777775
Q ss_pred HHHHhccccCCCCEEEEecccCcchhHHHHHHHHHHHHcCCceeeeeeeEecccCCC
Q 012900 147 ELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWIS 203 (454)
Q Consensus 147 ~F~~~fP~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkGi~iGNg~~~ 203 (454)
.. ...+++|+|+|+||..+..+|.+..+ .++++++-+++..
T Consensus 76 ~~-------~~~~~~l~G~S~Gg~~a~~~a~~~~~---------~v~~~i~~~~~~~ 116 (257)
T TIGR03611 76 AL-------NIERFHFVGHALGGLIGLQLALRYPE---------RLLSLVLINAWSR 116 (257)
T ss_pred Hh-------CCCcEEEEEechhHHHHHHHHHHChH---------HhHHheeecCCCC
Confidence 42 33679999999999999888864322 3788887666554
No 11
>PHA02857 monoglyceride lipase; Provisional
Probab=98.67 E-value=8.1e-07 Score=85.77 Aligned_cols=125 Identities=13% Similarity=0.159 Sum_probs=81.4
Q ss_pred cCCceEEEEEEEcCCCCCCCCCCCCEEEEEcCCCChhhhhhccccccCCCcccCCCCccchhc-cccceeecCCcccccC
Q 012900 44 RPKAHMFWWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLK-KADLLFVDNPVGTGYS 122 (454)
Q Consensus 44 ~~~~~lfywf~es~~~~~~p~~~~PlilWlnGGPGcSS~~~G~f~E~GP~~~~~~~n~~SW~~-~anvLfiDqPvGtGfS 122 (454)
.++..+++..|+.. .+| +|+||.++|.+++|.. +-.+ --.+.+ -..++-+|.| |.|.|
T Consensus 8 ~~g~~l~~~~~~~~---~~~---~~~v~llHG~~~~~~~-~~~~-------------~~~l~~~g~~via~D~~-G~G~S 66 (276)
T PHA02857 8 LDNDYIYCKYWKPI---TYP---KALVFISHGAGEHSGR-YEEL-------------AENISSLGILVFSHDHI-GHGRS 66 (276)
T ss_pred CCCCEEEEEeccCC---CCC---CEEEEEeCCCccccch-HHHH-------------HHHHHhCCCEEEEccCC-CCCCC
Confidence 34568898888752 122 3899999999777665 3111 123544 3689999999 99998
Q ss_pred CccCCCCcccchHHHHHHHHHHHHHHHHhccccCCCCEEEEecccCcchhHHHHHHHHHHHHcCCceeeeeeeEecccCC
Q 012900 123 YVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWI 202 (454)
Q Consensus 123 y~~~~~~~~~~~~~~A~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkGi~iGNg~~ 202 (454)
-.... ...+-....+|+.+++..+-+.+ ...+++|.|+|.||.-+..+|.+- +-+++|+++-+|.+
T Consensus 67 ~~~~~--~~~~~~~~~~d~~~~l~~~~~~~---~~~~~~lvG~S~GG~ia~~~a~~~---------p~~i~~lil~~p~~ 132 (276)
T PHA02857 67 NGEKM--MIDDFGVYVRDVVQHVVTIKSTY---PGVPVFLLGHSMGATISILAAYKN---------PNLFTAMILMSPLV 132 (276)
T ss_pred CCccC--CcCCHHHHHHHHHHHHHHHHhhC---CCCCEEEEEcCchHHHHHHHHHhC---------ccccceEEEecccc
Confidence 54321 12233445677777776554433 357899999999998776666321 12589999987765
Q ss_pred C
Q 012900 203 S 203 (454)
Q Consensus 203 ~ 203 (454)
.
T Consensus 133 ~ 133 (276)
T PHA02857 133 N 133 (276)
T ss_pred c
Confidence 4
No 12
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=98.65 E-value=1.7e-06 Score=84.37 Aligned_cols=123 Identities=15% Similarity=0.181 Sum_probs=83.9
Q ss_pred EEEEecCCceEEEEEEEcCCCCCCCCCCCCEEEEEcCCCChhhhhhccccccCCCcccCCCCccchhccccceeecCCcc
Q 012900 39 GYVEVRPKAHMFWWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLKKADLLFVDNPVG 118 (454)
Q Consensus 39 Gyv~v~~~~~lfywf~es~~~~~~p~~~~PlilWlnGGPGcSS~~~G~f~E~GP~~~~~~~n~~SW~~~anvLfiDqPvG 118 (454)
=|+++++ .+++| .+. .++ . |.||+|+|.++.|.++ -.+. -.+.+..+++.+|.| |
T Consensus 11 ~~~~~~~-~~i~y--~~~----G~~--~-~~vlllHG~~~~~~~w-~~~~-------------~~L~~~~~vi~~Dlp-G 65 (294)
T PLN02824 11 RTWRWKG-YNIRY--QRA----GTS--G-PALVLVHGFGGNADHW-RKNT-------------PVLAKSHRVYAIDLL-G 65 (294)
T ss_pred ceEEEcC-eEEEE--EEc----CCC--C-CeEEEECCCCCChhHH-HHHH-------------HHHHhCCeEEEEcCC-C
Confidence 4777753 35553 222 122 2 7899999999988874 2221 134566799999999 9
Q ss_pred cccCCccCCC----CcccchHHHHHHHHHHHHHHHHhccccCCCCEEEEecccCcchhHHHHHHHHHHHHcCCceeeeee
Q 012900 119 TGYSYVEDNS----SFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGG 194 (454)
Q Consensus 119 tGfSy~~~~~----~~~~~~~~~A~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkG 194 (454)
.|.|...+.. ....+.++.|+++.++|+.. ...+++|.|+|.||..+-.+|.+--+ .+++
T Consensus 66 ~G~S~~~~~~~~~~~~~~~~~~~a~~l~~~l~~l-------~~~~~~lvGhS~Gg~va~~~a~~~p~---------~v~~ 129 (294)
T PLN02824 66 YGYSDKPNPRSAPPNSFYTFETWGEQLNDFCSDV-------VGDPAFVICNSVGGVVGLQAAVDAPE---------LVRG 129 (294)
T ss_pred CCCCCCCccccccccccCCHHHHHHHHHHHHHHh-------cCCCeEEEEeCHHHHHHHHHHHhChh---------heeE
Confidence 9999653321 12346778888888888754 24789999999999998887754321 4899
Q ss_pred eEecccCC
Q 012900 195 VALGDSWI 202 (454)
Q Consensus 195 i~iGNg~~ 202 (454)
+++-|+..
T Consensus 130 lili~~~~ 137 (294)
T PLN02824 130 VMLINISL 137 (294)
T ss_pred EEEECCCc
Confidence 99877654
No 13
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=98.63 E-value=6.1e-07 Score=82.18 Aligned_cols=103 Identities=22% Similarity=0.224 Sum_probs=72.5
Q ss_pred EEEEcCCCChhhhhhccccccCCCcccCCCCccchhccccceeecCCcccccCCccCCCCcccchHHHHHHHHHHHHHHH
Q 012900 70 ILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLKKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLMELF 149 (454)
Q Consensus 70 ilWlnGGPGcSS~~~G~f~E~GP~~~~~~~n~~SW~~~anvLfiDqPvGtGfSy~~~~~~~~~~~~~~A~d~~~fL~~F~ 149 (454)
||.++|.++.+.. +.-+. ..+.+..+++.+|.| |.|.|-.... ....+-++.++++.++++..
T Consensus 1 vv~~hG~~~~~~~-~~~~~-------------~~l~~~~~v~~~d~~-G~G~s~~~~~-~~~~~~~~~~~~l~~~l~~~- 63 (228)
T PF12697_consen 1 VVFLHGFGGSSES-WDPLA-------------EALARGYRVIAFDLP-GHGRSDPPPD-YSPYSIEDYAEDLAELLDAL- 63 (228)
T ss_dssp EEEE-STTTTGGG-GHHHH-------------HHHHTTSEEEEEECT-TSTTSSSHSS-GSGGSHHHHHHHHHHHHHHT-
T ss_pred eEEECCCCCCHHH-HHHHH-------------HHHhCCCEEEEEecC-Cccccccccc-cCCcchhhhhhhhhhccccc-
Confidence 6899999988876 32221 123367889999999 9999875432 22456677777777777542
Q ss_pred HhccccCCCCEEEEecccCcchhHHHHHHHHHHHHcCCceeeeeeeEecccCCCc
Q 012900 150 NKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWISP 204 (454)
Q Consensus 150 ~~fP~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkGi~iGNg~~~p 204 (454)
...+++|.|+|+||..+-.++.+.- -.++|+++-++....
T Consensus 64 ------~~~~~~lvG~S~Gg~~a~~~a~~~p---------~~v~~~vl~~~~~~~ 103 (228)
T PF12697_consen 64 ------GIKKVILVGHSMGGMIALRLAARYP---------DRVKGLVLLSPPPPL 103 (228)
T ss_dssp ------TTSSEEEEEETHHHHHHHHHHHHSG---------GGEEEEEEESESSSH
T ss_pred ------ccccccccccccccccccccccccc---------cccccceeecccccc
Confidence 2278999999999999888875421 168999997777754
No 14
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.59 E-value=3.5e-06 Score=81.80 Aligned_cols=138 Identities=17% Similarity=0.197 Sum_probs=86.6
Q ss_pred CCCCceeeEEEEecCCceEEEEEEEcCCCCCCCCCCCCEEEEEcCCCChhhhhhccccccCCCcccCCCCccchhccccc
Q 012900 31 NQDASEEWGYVEVRPKAHMFWWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLKKADL 110 (454)
Q Consensus 31 ~~~~~~~sGyv~v~~~~~lfywf~es~~~~~~p~~~~PlilWlnGGPGcSS~~~G~f~E~GP~~~~~~~n~~SW~~~anv 110 (454)
+..-+-.+=|+.+.++...+ .++-.. .+ ++++-++.++| =|++++ +| ..|=.+..+.-||
T Consensus 60 ~~~v~~~~~~v~i~~~~~iw--~~~~~~---~~-~~~~plVliHG-yGAg~g---~f----------~~Nf~~La~~~~v 119 (365)
T KOG4409|consen 60 SVPVPYSKKYVRIPNGIEIW--TITVSN---ES-ANKTPLVLIHG-YGAGLG---LF----------FRNFDDLAKIRNV 119 (365)
T ss_pred hcCCCcceeeeecCCCceeE--EEeecc---cc-cCCCcEEEEec-cchhHH---HH----------HHhhhhhhhcCce
Confidence 33333344577776443443 443211 12 33456667885 444432 22 2243466778999
Q ss_pred eeecCCcccccCCccCCCCcccchHHHHHHHHHHHHHHHHhccccCCCCEEEEecccCcchhHHHHHHHHHHHHcCCcee
Q 012900 111 LFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKL 190 (454)
Q Consensus 111 LfiDqPvGtGfSy~~~~~~~~~~~~~~A~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~i 190 (454)
-.||.| |-|.|-...- ..+.+.+-+.+++-+++|....-- .+++|.|+|+||......|.+--+
T Consensus 120 yaiDll-G~G~SSRP~F---~~d~~~~e~~fvesiE~WR~~~~L---~KmilvGHSfGGYLaa~YAlKyPe--------- 183 (365)
T KOG4409|consen 120 YAIDLL-GFGRSSRPKF---SIDPTTAEKEFVESIEQWRKKMGL---EKMILVGHSFGGYLAAKYALKYPE--------- 183 (365)
T ss_pred EEeccc-CCCCCCCCCC---CCCcccchHHHHHHHHHHHHHcCC---cceeEeeccchHHHHHHHHHhChH---------
Confidence 999999 9999975432 223333344888999999886532 589999999999988877765443
Q ss_pred eeeeeEecccCCCc
Q 012900 191 KLGGVALGDSWISP 204 (454)
Q Consensus 191 nLkGi~iGNg~~~p 204 (454)
.++-++|-+||--|
T Consensus 184 rV~kLiLvsP~Gf~ 197 (365)
T KOG4409|consen 184 RVEKLILVSPWGFP 197 (365)
T ss_pred hhceEEEecccccc
Confidence 36778887776544
No 15
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=98.52 E-value=3.5e-06 Score=80.76 Aligned_cols=105 Identities=21% Similarity=0.228 Sum_probs=72.3
Q ss_pred CCEEEEEcCCCChhhhhhccccccCCCcccCCCCccchhccccceeecCCcccccCCccCCCCcccchHHHHHHHHHHHH
Q 012900 67 WPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLKKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLM 146 (454)
Q Consensus 67 ~PlilWlnGGPGcSS~~~G~f~E~GP~~~~~~~n~~SW~~~anvLfiDqPvGtGfSy~~~~~~~~~~~~~~A~d~~~fL~ 146 (454)
.|.||+++|.+|.+.. ...+. ....+..+++.+|.| |-|.|..... ...+-+..|+++.++++
T Consensus 28 ~~~vv~~hG~~~~~~~-~~~~~-------------~~l~~~~~vi~~D~~-G~G~S~~~~~--~~~~~~~~~~~l~~~i~ 90 (278)
T TIGR03056 28 GPLLLLLHGTGASTHS-WRDLM-------------PPLARSFRVVAPDLP-GHGFTRAPFR--FRFTLPSMAEDLSALCA 90 (278)
T ss_pred CCeEEEEcCCCCCHHH-HHHHH-------------HHHhhCcEEEeecCC-CCCCCCCccc--cCCCHHHHHHHHHHHHH
Confidence 3899999999877665 32111 012334789999999 9998864322 13467778888887775
Q ss_pred HHHHhccccCCCCEEEEecccCcchhHHHHHHHHHHHHcCCceeeeeeeEecccCCCc
Q 012900 147 ELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWISP 204 (454)
Q Consensus 147 ~F~~~fP~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkGi~iGNg~~~p 204 (454)
+ +..++++|.|+|+||..+..+|.+- +-.++++++.++..++
T Consensus 91 ~-------~~~~~~~lvG~S~Gg~~a~~~a~~~---------p~~v~~~v~~~~~~~~ 132 (278)
T TIGR03056 91 A-------EGLSPDGVIGHSAGAAIALRLALDG---------PVTPRMVVGINAALMP 132 (278)
T ss_pred H-------cCCCCceEEEECccHHHHHHHHHhC---------CcccceEEEEcCcccc
Confidence 3 2236889999999998777776432 2257888888876653
No 16
>PRK03204 haloalkane dehalogenase; Provisional
Probab=98.47 E-value=2.8e-06 Score=82.79 Aligned_cols=123 Identities=18% Similarity=0.260 Sum_probs=75.1
Q ss_pred eeeEEEEecCCceEEEEEEEcCCCCCCCCCCCCEEEEEcCCCChhhhhhccccccCCCcccCCCCccchhccccceeecC
Q 012900 36 EEWGYVEVRPKAHMFWWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLKKADLLFVDN 115 (454)
Q Consensus 36 ~~sGyv~v~~~~~lfywf~es~~~~~~p~~~~PlilWlnGGPGcSS~~~G~f~E~GP~~~~~~~n~~SW~~~anvLfiDq 115 (454)
..+.|++++. ..++| ... . +. |.||.|+|.|..+.. .-.+ --.+.+..+++-+|.
T Consensus 14 ~~~~~~~~~~-~~i~y--~~~----G---~~-~~iv~lHG~~~~~~~-~~~~-------------~~~l~~~~~vi~~D~ 68 (286)
T PRK03204 14 FESRWFDSSR-GRIHY--IDE----G---TG-PPILLCHGNPTWSFL-YRDI-------------IVALRDRFRCVAPDY 68 (286)
T ss_pred ccceEEEcCC-cEEEE--EEC----C---CC-CEEEEECCCCccHHH-HHHH-------------HHHHhCCcEEEEECC
Confidence 3457888864 35553 221 1 12 678889999854443 2111 112345689999999
Q ss_pred CcccccCCccCCCCcccchHHHHHHHHHHHHHHHHhccccCCCCEEEEecccCcchhHHHHHHHHHHHHcCCceeeeeee
Q 012900 116 PVGTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGV 195 (454)
Q Consensus 116 PvGtGfSy~~~~~~~~~~~~~~A~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkGi 195 (454)
| |.|.|-... ....+.++.++++.++++.+ ...+++|.|+|+||..+-.+|.+- +-.++++
T Consensus 69 ~-G~G~S~~~~--~~~~~~~~~~~~~~~~~~~~-------~~~~~~lvG~S~Gg~va~~~a~~~---------p~~v~~l 129 (286)
T PRK03204 69 L-GFGLSERPS--GFGYQIDEHARVIGEFVDHL-------GLDRYLSMGQDWGGPISMAVAVER---------ADRVRGV 129 (286)
T ss_pred C-CCCCCCCCC--ccccCHHHHHHHHHHHHHHh-------CCCCEEEEEECccHHHHHHHHHhC---------hhheeEE
Confidence 9 999884321 12234566666666655432 236799999999998655554321 1258899
Q ss_pred EecccCC
Q 012900 196 ALGDSWI 202 (454)
Q Consensus 196 ~iGNg~~ 202 (454)
++.++..
T Consensus 130 vl~~~~~ 136 (286)
T PRK03204 130 VLGNTWF 136 (286)
T ss_pred EEECccc
Confidence 8877643
No 17
>PRK10349 carboxylesterase BioH; Provisional
Probab=98.39 E-value=3.5e-06 Score=80.40 Aligned_cols=94 Identities=18% Similarity=0.098 Sum_probs=64.8
Q ss_pred CEEEEEcCCCChhhhhhccccccCCCcccCCCCccchhccccceeecCCcccccCCccCCCCcccchHHHHHHHHHHHHH
Q 012900 68 PIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLKKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLME 147 (454)
Q Consensus 68 PlilWlnGGPGcSS~~~G~f~E~GP~~~~~~~n~~SW~~~anvLfiDqPvGtGfSy~~~~~~~~~~~~~~A~d~~~fL~~ 147 (454)
|.||.++|.++++..+- +.-..+.+..+++.+|.| |.|.|-..+ ..+.++.++++.+
T Consensus 14 ~~ivllHG~~~~~~~w~--------------~~~~~L~~~~~vi~~Dl~-G~G~S~~~~----~~~~~~~~~~l~~---- 70 (256)
T PRK10349 14 VHLVLLHGWGLNAEVWR--------------CIDEELSSHFTLHLVDLP-GFGRSRGFG----ALSLADMAEAVLQ---- 70 (256)
T ss_pred CeEEEECCCCCChhHHH--------------HHHHHHhcCCEEEEecCC-CCCCCCCCC----CCCHHHHHHHHHh----
Confidence 56999999887777631 111245677899999999 999985321 2355566665442
Q ss_pred HHHhccccCCCCEEEEecccCcchhHHHHHHHHHHHHcCCceeeeeeeEeccc
Q 012900 148 LFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDS 200 (454)
Q Consensus 148 F~~~fP~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkGi~iGNg 200 (454)
+...++++.|+|+||..+..+|.+-. -.++++++-|+
T Consensus 71 -------~~~~~~~lvGhS~Gg~ia~~~a~~~p---------~~v~~lili~~ 107 (256)
T PRK10349 71 -------QAPDKAIWLGWSLGGLVASQIALTHP---------ERVQALVTVAS 107 (256)
T ss_pred -------cCCCCeEEEEECHHHHHHHHHHHhCh---------HhhheEEEecC
Confidence 12368999999999998888875321 25788888665
No 18
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=98.28 E-value=1.6e-05 Score=74.07 Aligned_cols=87 Identities=18% Similarity=0.160 Sum_probs=59.0
Q ss_pred CCEEEEEcCCCChhhhhhccccccCCCcccCCCCccchhccccceeecCCcccccCCccCCCCcccchHHHHHHHHHHHH
Q 012900 67 WPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLKKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLM 146 (454)
Q Consensus 67 ~PlilWlnGGPGcSS~~~G~f~E~GP~~~~~~~n~~SW~~~anvLfiDqPvGtGfSy~~~~~~~~~~~~~~A~d~~~fL~ 146 (454)
+|++|.++|-++.+.. ...+. ....+..+++-+|.| |.|.|-... ...+.++.++++.++++
T Consensus 13 ~~~li~~hg~~~~~~~-~~~~~-------------~~l~~~~~v~~~d~~-G~G~s~~~~---~~~~~~~~~~~~~~~i~ 74 (251)
T TIGR02427 13 APVLVFINSLGTDLRM-WDPVL-------------PALTPDFRVLRYDKR-GHGLSDAPE---GPYSIEDLADDVLALLD 74 (251)
T ss_pred CCeEEEEcCcccchhh-HHHHH-------------HHhhcccEEEEecCC-CCCCCCCCC---CCCCHHHHHHHHHHHHH
Confidence 4999999876444443 21111 112345799999999 999884322 23466777888877776
Q ss_pred HHHHhccccCCCCEEEEecccCcchhHHHHHH
Q 012900 147 ELFNKNEILQKSPLFIVAESYGGKFAATLGLA 178 (454)
Q Consensus 147 ~F~~~fP~~~~~~~yi~GESYgG~yvP~lA~~ 178 (454)
.+ ...+++|.|+|+||..+-.+|.+
T Consensus 75 ~~-------~~~~v~liG~S~Gg~~a~~~a~~ 99 (251)
T TIGR02427 75 HL-------GIERAVFCGLSLGGLIAQGLAAR 99 (251)
T ss_pred Hh-------CCCceEEEEeCchHHHHHHHHHH
Confidence 43 23579999999999988887754
No 19
>PLN02578 hydrolase
Probab=98.20 E-value=0.00019 Score=72.26 Aligned_cols=100 Identities=21% Similarity=0.161 Sum_probs=67.4
Q ss_pred CEEEEEcCCCChhhhhhccccccCCCcccCCCCccchhccccceeecCCcccccCCccCCCCcccchHHHHHHHHHHHHH
Q 012900 68 PIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLKKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLME 147 (454)
Q Consensus 68 PlilWlnGGPGcSS~~~G~f~E~GP~~~~~~~n~~SW~~~anvLfiDqPvGtGfSy~~~~~~~~~~~~~~A~d~~~fL~~ 147 (454)
|-||.++|-++.+..+ ... - --+.+..+++-+|.| |.|.|-... ...+.+..++++.+|++.
T Consensus 87 ~~vvliHG~~~~~~~w-~~~---~----------~~l~~~~~v~~~D~~-G~G~S~~~~---~~~~~~~~a~~l~~~i~~ 148 (354)
T PLN02578 87 LPIVLIHGFGASAFHW-RYN---I----------PELAKKYKVYALDLL-GFGWSDKAL---IEYDAMVWRDQVADFVKE 148 (354)
T ss_pred CeEEEECCCCCCHHHH-HHH---H----------HHHhcCCEEEEECCC-CCCCCCCcc---cccCHHHHHHHHHHHHHH
Confidence 4468899866654432 111 0 123456899999999 888885332 234566677888888775
Q ss_pred HHHhccccCCCCEEEEecccCcchhHHHHHHHHHHHHcCCceeeeeeeEecccC
Q 012900 148 LFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSW 201 (454)
Q Consensus 148 F~~~fP~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkGi~iGNg~ 201 (454)
.. ..+++|.|+|+||..+..+|.+-.+ .++++++.|+.
T Consensus 149 ~~-------~~~~~lvG~S~Gg~ia~~~A~~~p~---------~v~~lvLv~~~ 186 (354)
T PLN02578 149 VV-------KEPAVLVGNSLGGFTALSTAVGYPE---------LVAGVALLNSA 186 (354)
T ss_pred hc-------cCCeEEEEECHHHHHHHHHHHhChH---------hcceEEEECCC
Confidence 42 4689999999999988887765422 57888886653
No 20
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=98.09 E-value=5.5e-05 Score=70.21 Aligned_cols=95 Identities=18% Similarity=0.159 Sum_probs=60.5
Q ss_pred CEEEEEcCCCChhhhhhccccccCCCcccCCCCccchhccccceeecCCcccccCCccCCCCcccchHHHHHHHHHHHHH
Q 012900 68 PIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLKKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLME 147 (454)
Q Consensus 68 PlilWlnGGPGcSS~~~G~f~E~GP~~~~~~~n~~SW~~~anvLfiDqPvGtGfSy~~~~~~~~~~~~~~A~d~~~fL~~ 147 (454)
|.||.++|.++-+.. .-.+. ....+..+++.+|.| |.|.|.... ..+.++.++++.+.+
T Consensus 5 ~~iv~~HG~~~~~~~-~~~~~-------------~~l~~~~~vi~~d~~-G~G~s~~~~----~~~~~~~~~~~~~~~-- 63 (245)
T TIGR01738 5 VHLVLIHGWGMNAEV-FRCLD-------------EELSAHFTLHLVDLP-GHGRSRGFG----PLSLADAAEAIAAQA-- 63 (245)
T ss_pred ceEEEEcCCCCchhh-HHHHH-------------HhhccCeEEEEecCC-cCccCCCCC----CcCHHHHHHHHHHhC--
Confidence 789999987665554 21110 112335799999999 888875321 234555555544322
Q ss_pred HHHhccccCCCCEEEEecccCcchhHHHHHHHHHHHHcCCceeeeeeeEecccC
Q 012900 148 LFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSW 201 (454)
Q Consensus 148 F~~~fP~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkGi~iGNg~ 201 (454)
..++++.|+|+||..+..+|.+-.+ .++++++-++.
T Consensus 64 ---------~~~~~lvG~S~Gg~~a~~~a~~~p~---------~v~~~il~~~~ 99 (245)
T TIGR01738 64 ---------PDPAIWLGWSLGGLVALHIAATHPD---------RVRALVTVASS 99 (245)
T ss_pred ---------CCCeEEEEEcHHHHHHHHHHHHCHH---------hhheeeEecCC
Confidence 2589999999999988877754322 36777775543
No 21
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=98.08 E-value=0.00083 Score=64.68 Aligned_cols=104 Identities=18% Similarity=0.215 Sum_probs=61.8
Q ss_pred CEEEEEcCCCChhhhhhccccccCCCcccCCCCccchhccccceeecCCcccccCCccCCCCcccchHHHHHHHHHHHHH
Q 012900 68 PIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLKKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLME 147 (454)
Q Consensus 68 PlilWlnGGPGcSS~~~G~f~E~GP~~~~~~~n~~SW~~~anvLfiDqPvGtGfSy~~~~~~~~~~~~~~A~d~~~fL~~ 147 (454)
|.||.|+|.++-+..+.-.+. .-..-..+..+++-+|.| |.|.|-....+ .......++++.++++.
T Consensus 31 ~~ivllHG~~~~~~~~~~~~~----------~~~~l~~~~~~vi~~D~~-G~G~S~~~~~~--~~~~~~~~~~l~~~l~~ 97 (282)
T TIGR03343 31 EAVIMLHGGGPGAGGWSNYYR----------NIGPFVDAGYRVILKDSP-GFNKSDAVVMD--EQRGLVNARAVKGLMDA 97 (282)
T ss_pred CeEEEECCCCCchhhHHHHHH----------HHHHHHhCCCEEEEECCC-CCCCCCCCcCc--ccccchhHHHHHHHHHH
Confidence 678999997654433110000 000111234899999999 99998532111 11112345666655543
Q ss_pred HHHhccccCCCCEEEEecccCcchhHHHHHHHHHHHHcCCceeeeeeeEeccc
Q 012900 148 LFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDS 200 (454)
Q Consensus 148 F~~~fP~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkGi~iGNg 200 (454)
+...++++.|+|+||..+-.+|.+--+ .++++++-++
T Consensus 98 -------l~~~~~~lvG~S~Gg~ia~~~a~~~p~---------~v~~lvl~~~ 134 (282)
T TIGR03343 98 -------LDIEKAHLVGNSMGGATALNFALEYPD---------RIGKLILMGP 134 (282)
T ss_pred -------cCCCCeeEEEECchHHHHHHHHHhChH---------hhceEEEECC
Confidence 234789999999999999988864322 3667776554
No 22
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=98.04 E-value=0.00099 Score=69.41 Aligned_cols=134 Identities=16% Similarity=0.134 Sum_probs=80.9
Q ss_pred CceeeEEEEecCCceEEEEEEEcCCCCCCCCCCCCEEEEEcCCCChhhhhhccccccCCCcccCCCCccchhccccceee
Q 012900 34 ASEEWGYVEVRPKAHMFWWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLKKADLLFV 113 (454)
Q Consensus 34 ~~~~sGyv~v~~~~~lfywf~es~~~~~~p~~~~PlilWlnGGPGcSS~~~G~f~E~GP~~~~~~~n~~SW~~~anvLfi 113 (454)
.+.-.-|++.++ ..+||+....+ ..+ . +|.||+++|.+|.+.++...+. | .+ ...+.+...++-+
T Consensus 174 ~~~~~~~~~~~~-~~l~~~~~gp~---~~~-~-k~~VVLlHG~~~s~~~W~~~~~---~---~L---~~~~~~~yrVia~ 238 (481)
T PLN03087 174 CKFCTSWLSSSN-ESLFVHVQQPK---DNK-A-KEDVLFIHGFISSSAFWTETLF---P---NF---SDAAKSTYRLFAV 238 (481)
T ss_pred cceeeeeEeeCC-eEEEEEEecCC---CCC-C-CCeEEEECCCCccHHHHHHHHH---H---HH---HHHhhCCCEEEEE
Confidence 344456888865 47887665532 112 1 3789999999988876311100 0 00 0023456789999
Q ss_pred cCCcccccCCccCCCCcccchHHHHHHHHHHHHHHHHhccccCCCCEEEEecccCcchhHHHHHHHHHHHHcCCceeeee
Q 012900 114 DNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLG 193 (454)
Q Consensus 114 DqPvGtGfSy~~~~~~~~~~~~~~A~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLk 193 (454)
|.| |-|-|-.... ...+.++.++++. +.+.+. +...+++|.|+|.||..+-.+|.+-.+ .++
T Consensus 239 Dl~-G~G~S~~p~~--~~ytl~~~a~~l~---~~ll~~---lg~~k~~LVGhSmGG~iAl~~A~~~Pe---------~V~ 300 (481)
T PLN03087 239 DLL-GFGRSPKPAD--SLYTLREHLEMIE---RSVLER---YKVKSFHIVAHSLGCILALALAVKHPG---------AVK 300 (481)
T ss_pred CCC-CCCCCcCCCC--CcCCHHHHHHHHH---HHHHHH---cCCCCEEEEEECHHHHHHHHHHHhChH---------hcc
Confidence 999 8888843211 1234555555553 123332 234689999999999988887754221 478
Q ss_pred eeEeccc
Q 012900 194 GVALGDS 200 (454)
Q Consensus 194 Gi~iGNg 200 (454)
++++.++
T Consensus 301 ~LVLi~~ 307 (481)
T PLN03087 301 SLTLLAP 307 (481)
T ss_pred EEEEECC
Confidence 8888664
No 23
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=98.01 E-value=2.6e-05 Score=76.72 Aligned_cols=125 Identities=18% Similarity=0.308 Sum_probs=79.7
Q ss_pred eEEEEecCCceEEEEEEEcCCCCCCCCCCCCEEEEEcCCCChhhhhhccccccCCCcccCCCCccch-hccccceeecCC
Q 012900 38 WGYVEVRPKAHMFWWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTW-LKKADLLFVDNP 116 (454)
Q Consensus 38 sGyv~v~~~~~lfywf~es~~~~~~p~~~~PlilWlnGGPGcSS~~~G~f~E~GP~~~~~~~n~~SW-~~~anvLfiDqP 116 (454)
.+|+++.++..++|+-.. +| +. |-||.++|+||.++. .... ..| .+..+|+-+|.|
T Consensus 6 ~~~~~~~~~~~l~y~~~g------~~-~~-~~lvllHG~~~~~~~-~~~~--------------~~~~~~~~~vi~~D~~ 62 (306)
T TIGR01249 6 SGYLNVSDNHQLYYEQSG------NP-DG-KPVVFLHGGPGSGTD-PGCR--------------RFFDPETYRIVLFDQR 62 (306)
T ss_pred CCeEEcCCCcEEEEEECc------CC-CC-CEEEEECCCCCCCCC-HHHH--------------hccCccCCEEEEECCC
Confidence 489999877778764421 23 22 457889999988653 1110 012 145789999999
Q ss_pred cccccCCccCCCCcccchHHHHHHHHHHHHHHHHhccccCCCCEEEEecccCcchhHHHHHHHHHHHHcCCceeeeeeeE
Q 012900 117 VGTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVA 196 (454)
Q Consensus 117 vGtGfSy~~~~~~~~~~~~~~A~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkGi~ 196 (454)
|.|.|..... ....+.++.++++..+++. +...++++.|+||||..+-.+|.+--+ .+++++
T Consensus 63 -G~G~S~~~~~-~~~~~~~~~~~dl~~l~~~-------l~~~~~~lvG~S~GG~ia~~~a~~~p~---------~v~~lv 124 (306)
T TIGR01249 63 -GCGKSTPHAC-LEENTTWDLVADIEKLREK-------LGIKNWLVFGGSWGSTLALAYAQTHPE---------VVTGLV 124 (306)
T ss_pred -CCCCCCCCCC-cccCCHHHHHHHHHHHHHH-------cCCCCEEEEEECHHHHHHHHHHHHChH---------hhhhhe
Confidence 9999964321 1233455666666555542 223579999999999888777754322 467877
Q ss_pred ecccCCC
Q 012900 197 LGDSWIS 203 (454)
Q Consensus 197 iGNg~~~ 203 (454)
+-+..+.
T Consensus 125 l~~~~~~ 131 (306)
T TIGR01249 125 LRGIFLL 131 (306)
T ss_pred eeccccC
Confidence 7666554
No 24
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=97.88 E-value=0.00016 Score=73.70 Aligned_cols=132 Identities=17% Similarity=0.167 Sum_probs=85.3
Q ss_pred EEEecCCceEEEEEEEcCCCCCCCCCCCCEEEEEcCCCChhhhhhccccccCCCcccCCCCccchh-ccccceeecCCcc
Q 012900 40 YVEVRPKAHMFWWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWL-KKADLLFVDNPVG 118 (454)
Q Consensus 40 yv~v~~~~~lfywf~es~~~~~~p~~~~PlilWlnGGPGcSS~~~G~f~E~GP~~~~~~~n~~SW~-~~anvLfiDqPvG 118 (454)
.+.-..+..+|++.++.. .+ +.+|+||+++|.++.+.. +-.+ -..+. +-.+++-+|.| |
T Consensus 114 ~~~~~~~~~l~~~~~~p~----~~-~~~~~Vl~lHG~~~~~~~-~~~~-------------a~~L~~~Gy~V~~~D~r-G 173 (395)
T PLN02652 114 LFYGARRNALFCRSWAPA----AG-EMRGILIIIHGLNEHSGR-YLHF-------------AKQLTSCGFGVYAMDWI-G 173 (395)
T ss_pred EEECCCCCEEEEEEecCC----CC-CCceEEEEECCchHHHHH-HHHH-------------HHHHHHCCCEEEEeCCC-C
Confidence 333333457888777642 11 224899999998876654 2111 01232 35689999999 9
Q ss_pred cccCCccCCCCcccchHHHHHHHHHHHHHHHHhccccCCCCEEEEecccCcchhHHHHHHHHHHHHcCCceeeeeeeEec
Q 012900 119 TGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALG 198 (454)
Q Consensus 119 tGfSy~~~~~~~~~~~~~~A~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkGi~iG 198 (454)
-|.|-... .+..+.+..++|+..+++..-..+|+ .+++|+|+|+||..+..++.+ . +..-.++|+++.
T Consensus 174 hG~S~~~~--~~~~~~~~~~~Dl~~~l~~l~~~~~~---~~i~lvGhSmGG~ial~~a~~------p-~~~~~v~glVL~ 241 (395)
T PLN02652 174 HGGSDGLH--GYVPSLDYVVEDTEAFLEKIRSENPG---VPCFLFGHSTGGAVVLKAASY------P-SIEDKLEGIVLT 241 (395)
T ss_pred CCCCCCCC--CCCcCHHHHHHHHHHHHHHHHHhCCC---CCEEEEEECHHHHHHHHHHhc------c-CcccccceEEEE
Confidence 99885432 23446677788888888877665553 589999999999877654421 1 111258899997
Q ss_pred ccCCC
Q 012900 199 DSWIS 203 (454)
Q Consensus 199 Ng~~~ 203 (454)
+|++.
T Consensus 242 sP~l~ 246 (395)
T PLN02652 242 SPALR 246 (395)
T ss_pred Ccccc
Confidence 77653
No 25
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=97.84 E-value=0.00013 Score=72.57 Aligned_cols=138 Identities=18% Similarity=0.202 Sum_probs=87.9
Q ss_pred eeeEEEEecCCceEEEEEEEcCCCCCCCCCCCCEEEEEcCCCChhhhhhccccccCCCcccCCCCccchhc-cccceeec
Q 012900 36 EEWGYVEVRPKAHMFWWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLK-KADLLFVD 114 (454)
Q Consensus 36 ~~sGyv~v~~~~~lfywf~es~~~~~~p~~~~PlilWlnGGPGcSS~~~G~f~E~GP~~~~~~~n~~SW~~-~anvLfiD 114 (454)
...+++...++..++|+.+.... ..+ .+|+||+++|..+.++. . + ..-...+++ -.+|+-+|
T Consensus 32 ~~~~~~~~~dg~~l~~~~~~~~~--~~~--~~~~VvllHG~~~~~~~-~--~----------~~~~~~L~~~Gy~V~~~D 94 (330)
T PLN02298 32 GSKSFFTSPRGLSLFTRSWLPSS--SSP--PRALIFMVHGYGNDISW-T--F----------QSTAIFLAQMGFACFALD 94 (330)
T ss_pred cccceEEcCCCCEEEEEEEecCC--CCC--CceEEEEEcCCCCCcce-e--h----------hHHHHHHHhCCCEEEEec
Confidence 34578877777788887664211 112 24899999998533321 0 0 000112454 48999999
Q ss_pred CCcccccCCccCCCCcccchHHHHHHHHHHHHHHHHhccccCCCCEEEEecccCcchhHHHHHHHHHHHHcCCceeeeee
Q 012900 115 NPVGTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGG 194 (454)
Q Consensus 115 qPvGtGfSy~~~~~~~~~~~~~~A~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkG 194 (454)
+| |.|.|-... ....+.+..++|+..+++..-. ..++.+.+++|.|+|.||..+..++.+- +-.++|
T Consensus 95 ~r-GhG~S~~~~--~~~~~~~~~~~D~~~~i~~l~~-~~~~~~~~i~l~GhSmGG~ia~~~a~~~---------p~~v~~ 161 (330)
T PLN02298 95 LE-GHGRSEGLR--AYVPNVDLVVEDCLSFFNSVKQ-REEFQGLPRFLYGESMGGAICLLIHLAN---------PEGFDG 161 (330)
T ss_pred CC-CCCCCCCcc--ccCCCHHHHHHHHHHHHHHHHh-cccCCCCCEEEEEecchhHHHHHHHhcC---------ccccee
Confidence 99 999885321 2234667788999888875543 2233456899999999999776655321 114899
Q ss_pred eEecccCCC
Q 012900 195 VALGDSWIS 203 (454)
Q Consensus 195 i~iGNg~~~ 203 (454)
+++-+++..
T Consensus 162 lvl~~~~~~ 170 (330)
T PLN02298 162 AVLVAPMCK 170 (330)
T ss_pred EEEeccccc
Confidence 999777654
No 26
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=97.84 E-value=7.7e-05 Score=74.23 Aligned_cols=130 Identities=22% Similarity=0.368 Sum_probs=82.0
Q ss_pred eEEEEEEEcCCCCCCCCCCCCEEEEEcCCCChhhhhhccccccCCCcccCCCCccchhccccceeecCCccc----ccCC
Q 012900 48 HMFWWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLKKADLLFVDNPVGT----GYSY 123 (454)
Q Consensus 48 ~lfywf~es~~~~~~p~~~~PlilWlnGGPGcSS~~~G~f~E~GP~~~~~~~n~~SW~~~anvLfiDqPvGt----GfSy 123 (454)
.-.||+++++++ .+|+.| |+||+++|| |.+.+.=|+.+..-.+-|..-+...+|.+|-..-. |+-
T Consensus 105 ~~s~Wlvk~P~~-~~pk~D-pVlIYlHGG--------GY~l~~~p~qi~~L~~i~~~l~~~SILvLDYsLt~~~~~~~~- 173 (374)
T PF10340_consen 105 SQSYWLVKAPNR-FKPKSD-PVLIYLHGG--------GYFLGTTPSQIEFLLNIYKLLPEVSILVLDYSLTSSDEHGHK- 173 (374)
T ss_pred cceEEEEeCCcc-cCCCCC-cEEEEEcCC--------eeEecCCHHHHHHHHHHHHHcCCCeEEEEeccccccccCCCc-
Confidence 346999997432 357555 999999999 56777778775321122222224489999976544 322
Q ss_pred ccCCCCcccchHHHHHHHHHHHHHHHHhccccCCCCEEEEecccCcchhHHHHHHHHHHHHcCCceeeeeeeEecccCCC
Q 012900 124 VEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWIS 203 (454)
Q Consensus 124 ~~~~~~~~~~~~~~A~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkGi~iGNg~~~ 203 (454)
+++=. .++.+..+...+. -...++.|.|+|=||+-+-.+.+++.+.+ ..... |++++-.||+.
T Consensus 174 ------yPtQL----~qlv~~Y~~Lv~~---~G~~nI~LmGDSAGGnL~Ls~LqyL~~~~---~~~~P-k~~iLISPWv~ 236 (374)
T PF10340_consen 174 ------YPTQL----RQLVATYDYLVES---EGNKNIILMGDSAGGNLALSFLQYLKKPN---KLPYP-KSAILISPWVN 236 (374)
T ss_pred ------CchHH----HHHHHHHHHHHhc---cCCCeEEEEecCccHHHHHHHHHHHhhcC---CCCCC-ceeEEECCCcC
Confidence 23222 2233333434322 23478999999999999999988875532 22222 67888899999
Q ss_pred ch
Q 012900 204 PE 205 (454)
Q Consensus 204 p~ 205 (454)
+.
T Consensus 237 l~ 238 (374)
T PF10340_consen 237 LV 238 (374)
T ss_pred Cc
Confidence 86
No 27
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=97.83 E-value=0.0012 Score=64.16 Aligned_cols=137 Identities=20% Similarity=0.190 Sum_probs=87.5
Q ss_pred ceeeEEEEecCCceEEEEEEEcCCCCCCCCCCCCEEEEEcCCCChhhhhhccccccCCCcccCCCCccchhcc-ccceee
Q 012900 35 SEEWGYVEVRPKAHMFWWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLKK-ADLLFV 113 (454)
Q Consensus 35 ~~~sGyv~v~~~~~lfywf~es~~~~~~p~~~~PlilWlnGGPGcSS~~~G~f~E~GP~~~~~~~n~~SW~~~-anvLfi 113 (454)
....+|+++++ +++++.|. -++. .|+++.|+|=|=.+=++- .---..... ..++.+
T Consensus 21 ~~~hk~~~~~g---I~~h~~e~-----g~~~-gP~illlHGfPe~wyswr--------------~q~~~la~~~~rviA~ 77 (322)
T KOG4178|consen 21 AISHKFVTYKG---IRLHYVEG-----GPGD-GPIVLLLHGFPESWYSWR--------------HQIPGLASRGYRVIAP 77 (322)
T ss_pred hcceeeEEEcc---EEEEEEee-----cCCC-CCEEEEEccCCccchhhh--------------hhhhhhhhcceEEEec
Confidence 34558999864 88888885 2323 499999998886653320 000011222 678999
Q ss_pred cCCcccccCCccCCCCcccchHHHHHHHHHHHHHHHHhccccCCCCEEEEecccCcchhHHHHHHHHHHHHcCCceeeee
Q 012900 114 DNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLG 193 (454)
Q Consensus 114 DqPvGtGfSy~~~~~~~~~~~~~~A~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLk 193 (454)
|.+ |-|+|-.-... ...|....+.|+..+|.. +.....++.|++||+..+=.+|..--+.. .+ -++++
T Consensus 78 Dlr-GyG~Sd~P~~~-~~Yt~~~l~~di~~lld~-------Lg~~k~~lvgHDwGaivaw~la~~~Perv-~~--lv~~n 145 (322)
T KOG4178|consen 78 DLR-GYGFSDAPPHI-SEYTIDELVGDIVALLDH-------LGLKKAFLVGHDWGAIVAWRLALFYPERV-DG--LVTLN 145 (322)
T ss_pred CCC-CCCCCCCCCCc-ceeeHHHHHHHHHHHHHH-------hccceeEEEeccchhHHHHHHHHhChhhc-ce--EEEec
Confidence 999 99999664331 234667777778777763 34688999999999988877775543321 11 23444
Q ss_pred eeEecccCCCchhh
Q 012900 194 GVALGDSWISPEDF 207 (454)
Q Consensus 194 Gi~iGNg~~~p~~~ 207 (454)
+... |+..+|.+.
T Consensus 146 v~~~-~p~~~~~~~ 158 (322)
T KOG4178|consen 146 VPFP-NPKLKPLDS 158 (322)
T ss_pred CCCC-Ccccchhhh
Confidence 4444 677777653
No 28
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=97.77 E-value=0.00019 Score=71.92 Aligned_cols=127 Identities=15% Similarity=0.181 Sum_probs=81.2
Q ss_pred CCceEEEEEEEcCCCCCCCCCCCCEEEEEcCCCChhhhhhccccccCCCcccCCCCccchhc-cccceeecCCcccccCC
Q 012900 45 PKAHMFWWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLK-KADLLFVDNPVGTGYSY 123 (454)
Q Consensus 45 ~~~~lfywf~es~~~~~~p~~~~PlilWlnGGPGcSS~~~G~f~E~GP~~~~~~~n~~SW~~-~anvLfiDqPvGtGfSy 123 (454)
.+..+|+..+..+ +. +.+|+||+++|..+.++...- .--..+.+ -.+|+-+|.| |.|.|-
T Consensus 70 ~g~~l~~~~~~p~---~~--~~~~~iv~lHG~~~~~~~~~~-------------~~~~~l~~~g~~v~~~D~~-G~G~S~ 130 (349)
T PLN02385 70 RGVEIFSKSWLPE---NS--RPKAAVCFCHGYGDTCTFFFE-------------GIARKIASSGYGVFAMDYP-GFGLSE 130 (349)
T ss_pred CCCEEEEEEEecC---CC--CCCeEEEEECCCCCccchHHH-------------HHHHHHHhCCCEEEEecCC-CCCCCC
Confidence 4557887666532 11 224899999997665443110 00113444 4789999999 999885
Q ss_pred ccCCCCcccchHHHHHHHHHHHHHHHHhccccCCCCEEEEecccCcchhHHHHHHHHHHHHcCCceeeeeeeEecccCC
Q 012900 124 VEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWI 202 (454)
Q Consensus 124 ~~~~~~~~~~~~~~A~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkGi~iGNg~~ 202 (454)
... .+..+-++.++|+.++++.. ...+++...+++|.|+|+||..+..+|.+- +-.++|+++-++..
T Consensus 131 ~~~--~~~~~~~~~~~dv~~~l~~l-~~~~~~~~~~~~LvGhSmGG~val~~a~~~---------p~~v~glVLi~p~~ 197 (349)
T PLN02385 131 GLH--GYIPSFDDLVDDVIEHYSKI-KGNPEFRGLPSFLFGQSMGGAVALKVHLKQ---------PNAWDGAILVAPMC 197 (349)
T ss_pred CCC--CCcCCHHHHHHHHHHHHHHH-HhccccCCCCEEEEEeccchHHHHHHHHhC---------cchhhheeEecccc
Confidence 422 22345677788888887653 333455567899999999998877665321 11478998876654
No 29
>PRK00870 haloalkane dehalogenase; Provisional
Probab=97.73 E-value=0.00029 Score=68.99 Aligned_cols=130 Identities=16% Similarity=0.170 Sum_probs=81.8
Q ss_pred CCCCceeeEEEEecCC----ceEEEEEEEcCCCCCCCCCCCCEEEEEcCCCChhhhhhccccccCCCcccCCCCccchh-
Q 012900 31 NQDASEEWGYVEVRPK----AHMFWWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWL- 105 (454)
Q Consensus 31 ~~~~~~~sGyv~v~~~----~~lfywf~es~~~~~~p~~~~PlilWlnGGPGcSS~~~G~f~E~GP~~~~~~~n~~SW~- 105 (454)
+++.+..-.|+.|++. .+++|. +. .+| + .|.||.++|.|+.+..+ ..+. | -..
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~i~y~--~~----G~~-~-~~~lvliHG~~~~~~~w-~~~~---~----------~L~~ 71 (302)
T PRK00870 14 LPDYPFAPHYVDVDDGDGGPLRMHYV--DE----GPA-D-GPPVLLLHGEPSWSYLY-RKMI---P----------ILAA 71 (302)
T ss_pred CcCCCCCceeEeecCCCCceEEEEEE--ec----CCC-C-CCEEEEECCCCCchhhH-HHHH---H----------HHHh
Confidence 3444444489999751 356643 31 234 2 38899999998777663 1111 0 122
Q ss_pred ccccceeecCCcccccCCccCCCCcccchHHHHHHHHHHHHHHHHhccccCCCCEEEEecccCcchhHHHHHHHHHHHHc
Q 012900 106 KKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEA 185 (454)
Q Consensus 106 ~~anvLfiDqPvGtGfSy~~~~~~~~~~~~~~A~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~ 185 (454)
+..+|+.+|.| |.|.|-.... ....+.++.++++.++|+. +...+++|.|+|+||..+-.+|.+--+
T Consensus 72 ~gy~vi~~Dl~-G~G~S~~~~~-~~~~~~~~~a~~l~~~l~~-------l~~~~v~lvGhS~Gg~ia~~~a~~~p~---- 138 (302)
T PRK00870 72 AGHRVIAPDLI-GFGRSDKPTR-REDYTYARHVEWMRSWFEQ-------LDLTDVTLVCQDWGGLIGLRLAAEHPD---- 138 (302)
T ss_pred CCCEEEEECCC-CCCCCCCCCC-cccCCHHHHHHHHHHHHHH-------cCCCCEEEEEEChHHHHHHHHHHhChh----
Confidence 24789999999 9998843211 1123566777777666653 234689999999999988887754211
Q ss_pred CCceeeeeeeEeccc
Q 012900 186 GKLKLKLGGVALGDS 200 (454)
Q Consensus 186 ~~~~inLkGi~iGNg 200 (454)
.++++++-++
T Consensus 139 -----~v~~lvl~~~ 148 (302)
T PRK00870 139 -----RFARLVVANT 148 (302)
T ss_pred -----heeEEEEeCC
Confidence 4788887554
No 30
>PRK06489 hypothetical protein; Provisional
Probab=97.72 E-value=0.00052 Score=69.20 Aligned_cols=112 Identities=21% Similarity=0.118 Sum_probs=64.6
Q ss_pred CCEEEEEcCCCChhhhhhccccccCCCccc-C-CCCccchhccccceeecCCcccccCCccCCCC----cccchHHHHHH
Q 012900 67 WPIILWLQGGPGASGVGIGNFEEVGPFDTY-L-KPRNSTWLKKADLLFVDNPVGTGYSYVEDNSS----FVKNDVEAAND 140 (454)
Q Consensus 67 ~PlilWlnGGPGcSS~~~G~f~E~GP~~~~-~-~~n~~SW~~~anvLfiDqPvGtGfSy~~~~~~----~~~~~~~~A~d 140 (454)
.|.||.++|++|.+..+. .|.... + .+...--.+..+||.+|.| |.|.|-...... ...+.++.+++
T Consensus 69 gpplvllHG~~~~~~~~~------~~~~~~~l~~~~~~l~~~~~~Via~Dl~-GhG~S~~p~~~~~~~~~~~~~~~~a~~ 141 (360)
T PRK06489 69 DNAVLVLHGTGGSGKSFL------SPTFAGELFGPGQPLDASKYFIILPDGI-GHGKSSKPSDGLRAAFPRYDYDDMVEA 141 (360)
T ss_pred CCeEEEeCCCCCchhhhc------cchhHHHhcCCCCcccccCCEEEEeCCC-CCCCCCCCCcCCCCCCCcccHHHHHHH
Confidence 488999999998765421 000000 0 0000001356799999999 999885322110 02355666776
Q ss_pred HHHHHHHHHHhccccCCCCE-EEEecccCcchhHHHHHHHHHHHHcCCceeeeeeeEeccc
Q 012900 141 LTTLLMELFNKNEILQKSPL-FIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDS 200 (454)
Q Consensus 141 ~~~fL~~F~~~fP~~~~~~~-yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkGi~iGNg 200 (454)
+.+++..- +.-.++ +|.|.|+||..+-.+|.+--+ .++++++-++
T Consensus 142 ~~~~l~~~------lgi~~~~~lvG~SmGG~vAl~~A~~~P~---------~V~~LVLi~s 187 (360)
T PRK06489 142 QYRLVTEG------LGVKHLRLILGTSMGGMHAWMWGEKYPD---------FMDALMPMAS 187 (360)
T ss_pred HHHHHHHh------cCCCceeEEEEECHHHHHHHHHHHhCch---------hhheeeeecc
Confidence 66654321 222455 489999999988877754322 4677776544
No 31
>PRK10673 acyl-CoA esterase; Provisional
Probab=97.70 E-value=0.00012 Score=69.38 Aligned_cols=99 Identities=24% Similarity=0.244 Sum_probs=72.2
Q ss_pred CCCEEEEEcCCCChhhhhhccccccCCCcccCCCCccchhccccceeecCCcccccCCccCCCCcccchHHHHHHHHHHH
Q 012900 66 PWPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLKKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLL 145 (454)
Q Consensus 66 ~~PlilWlnGGPGcSS~~~G~f~E~GP~~~~~~~n~~SW~~~anvLfiDqPvGtGfSy~~~~~~~~~~~~~~A~d~~~fL 145 (454)
+.|.||+++|.+|.+.. ..-+. -.+.+..+++.+|.| |-|.|.... ..+-++.++|+.+++
T Consensus 15 ~~~~iv~lhG~~~~~~~-~~~~~-------------~~l~~~~~vi~~D~~-G~G~s~~~~----~~~~~~~~~d~~~~l 75 (255)
T PRK10673 15 NNSPIVLVHGLFGSLDN-LGVLA-------------RDLVNDHDIIQVDMR-NHGLSPRDP----VMNYPAMAQDLLDTL 75 (255)
T ss_pred CCCCEEEECCCCCchhH-HHHHH-------------HHHhhCCeEEEECCC-CCCCCCCCC----CCCHHHHHHHHHHHH
Confidence 34999999999988876 32221 123456799999999 889886421 246678899999988
Q ss_pred HHHHHhccccCCCCEEEEecccCcchhHHHHHHHHHHHHcCCceeeeeeeEecc
Q 012900 146 MELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGD 199 (454)
Q Consensus 146 ~~F~~~fP~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkGi~iGN 199 (454)
..+ ...+++|.|+|.||..+..+|.+-.+ .++++++.+
T Consensus 76 ~~l-------~~~~~~lvGhS~Gg~va~~~a~~~~~---------~v~~lvli~ 113 (255)
T PRK10673 76 DAL-------QIEKATFIGHSMGGKAVMALTALAPD---------RIDKLVAID 113 (255)
T ss_pred HHc-------CCCceEEEEECHHHHHHHHHHHhCHh---------hcceEEEEe
Confidence 753 33579999999999999888855322 478888755
No 32
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=97.68 E-value=0.00027 Score=72.38 Aligned_cols=106 Identities=18% Similarity=0.172 Sum_probs=68.7
Q ss_pred CCEEEEEcCCCChhhhhhccccccCCCcccCCCCccchhccccceeecCCcccccCCccCCCCcccchHHHHHHHHHHHH
Q 012900 67 WPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLKKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLM 146 (454)
Q Consensus 67 ~PlilWlnGGPGcSS~~~G~f~E~GP~~~~~~~n~~SW~~~anvLfiDqPvGtGfSy~~~~~~~~~~~~~~A~d~~~fL~ 146 (454)
.|.||.|+|.++.+..+.- +-..+.+..+|+-+|.| |.|.|-... ....+.+++.+.+.+.+.
T Consensus 105 ~p~vvllHG~~~~~~~~~~--------------~~~~L~~~~~vi~~D~r-G~G~S~~~~--~~~~~~~~~~~~~~~~i~ 167 (402)
T PLN02894 105 APTLVMVHGYGASQGFFFR--------------NFDALASRFRVIAIDQL-GWGGSSRPD--FTCKSTEETEAWFIDSFE 167 (402)
T ss_pred CCEEEEECCCCcchhHHHH--------------HHHHHHhCCEEEEECCC-CCCCCCCCC--cccccHHHHHHHHHHHHH
Confidence 4999999998776654211 11234456899999999 999884321 111233445555666666
Q ss_pred HHHHhccccCCCCEEEEecccCcchhHHHHHHHHHHHHcCCceeeeeeeEecccC
Q 012900 147 ELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSW 201 (454)
Q Consensus 147 ~F~~~fP~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkGi~iGNg~ 201 (454)
.|.+.. ...+++|.|+|+||..+-.+|.+- +-.++++++.++.
T Consensus 168 ~~~~~l---~~~~~~lvGhS~GG~la~~~a~~~---------p~~v~~lvl~~p~ 210 (402)
T PLN02894 168 EWRKAK---NLSNFILLGHSFGGYVAAKYALKH---------PEHVQHLILVGPA 210 (402)
T ss_pred HHHHHc---CCCCeEEEEECHHHHHHHHHHHhC---------chhhcEEEEECCc
Confidence 666533 235899999999999877776432 1257888887654
No 33
>PRK07581 hypothetical protein; Validated
Probab=97.62 E-value=0.0063 Score=60.63 Aligned_cols=52 Identities=15% Similarity=0.069 Sum_probs=41.2
Q ss_pred CceEEEEeccCCCCCChhhHHHHHHhcccccccccccCCceeeEeCCCceeeeEEEEEcCeEEEEEcC-CcccccccCCh
Q 012900 365 GVNVTVYNGQLDVICSTKGTEAWIEKLKWDGLQKFLSTERTPLFCGNDKITKGFKKSYKNLHFYWILG-AGHFKNYCDTW 443 (454)
Q Consensus 365 ~irVLiy~Gd~D~i~n~~G~~~~i~~L~W~g~~~f~~a~~~~w~~~~~~~~~G~~k~~~nLtf~~V~~-AGHmvP~dqP~ 443 (454)
.++|||..|+.|.++|....+.+.+.+. +..+++|.+ |||+++.+||+
T Consensus 275 ~~PtLvI~G~~D~~~p~~~~~~l~~~ip-------------------------------~a~l~~i~~~~GH~~~~~~~~ 323 (339)
T PRK07581 275 TAKTFVMPISTDLYFPPEDCEAEAALIP-------------------------------NAELRPIESIWGHLAGFGQNP 323 (339)
T ss_pred CCCEEEEEeCCCCCCCHHHHHHHHHhCC-------------------------------CCeEEEeCCCCCccccccCcH
Confidence 5899999999999999877766555443 234567888 99999999998
Q ss_pred hhhh
Q 012900 444 SGKR 447 (454)
Q Consensus 444 ~~~~ 447 (454)
...+
T Consensus 324 ~~~~ 327 (339)
T PRK07581 324 ADIA 327 (339)
T ss_pred HHHH
Confidence 7653
No 34
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=97.54 E-value=0.00046 Score=66.62 Aligned_cols=121 Identities=13% Similarity=0.077 Sum_probs=77.1
Q ss_pred EEecCCceEEEEEEEcCCCCCCCCCCCCEEEEEcCCCChhhhhhccccccCCCcccCCCCccchhccccceeecCCcccc
Q 012900 41 VEVRPKAHMFWWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLKKADLLFVDNPVGTG 120 (454)
Q Consensus 41 v~v~~~~~lfywf~es~~~~~~p~~~~PlilWlnGGPGcSS~~~G~f~E~GP~~~~~~~n~~SW~~~anvLfiDqPvGtG 120 (454)
+.++ +..+.||..+. .+ . .|.||+++|-++.+..+ ..+. --..+..+++-+|.| |-|
T Consensus 7 ~~~~-~~~~~~~~~~~-----~~-~-~~plvllHG~~~~~~~w-~~~~-------------~~L~~~~~vi~~Dl~-G~G 63 (276)
T TIGR02240 7 IDLD-GQSIRTAVRPG-----KE-G-LTPLLIFNGIGANLELV-FPFI-------------EALDPDLEVIAFDVP-GVG 63 (276)
T ss_pred eccC-CcEEEEEEecC-----CC-C-CCcEEEEeCCCcchHHH-HHHH-------------HHhccCceEEEECCC-CCC
Confidence 4443 34677766542 12 2 26789999866655542 1111 012346799999999 999
Q ss_pred cCCccCCCCcccchHHHHHHHHHHHHHHHHhccccCCCCEEEEecccCcchhHHHHHHHHHHHHcCCceeeeeeeEeccc
Q 012900 121 YSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDS 200 (454)
Q Consensus 121 fSy~~~~~~~~~~~~~~A~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkGi~iGNg 200 (454)
.|-... ...+.+..++++.+++... .-.+++|.|+|+||..+-.+|.+--+ .++++++.|+
T Consensus 64 ~S~~~~---~~~~~~~~~~~~~~~i~~l-------~~~~~~LvG~S~GG~va~~~a~~~p~---------~v~~lvl~~~ 124 (276)
T TIGR02240 64 GSSTPR---HPYRFPGLAKLAARMLDYL-------DYGQVNAIGVSWGGALAQQFAHDYPE---------RCKKLILAAT 124 (276)
T ss_pred CCCCCC---CcCcHHHHHHHHHHHHHHh-------CcCceEEEEECHHHHHHHHHHHHCHH---------HhhheEEecc
Confidence 995321 1235566677777666643 23689999999999988877754221 4899999777
Q ss_pred CCC
Q 012900 201 WIS 203 (454)
Q Consensus 201 ~~~ 203 (454)
...
T Consensus 125 ~~~ 127 (276)
T TIGR02240 125 AAG 127 (276)
T ss_pred CCc
Confidence 653
No 35
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=97.45 E-value=0.00024 Score=66.79 Aligned_cols=100 Identities=21% Similarity=0.282 Sum_probs=68.6
Q ss_pred CCEEEEEcCCCChhhhhhccccccCCCcccCCCCccchhccccceeecCCcccccCCccCCCCcccchHHHHHHHHHHHH
Q 012900 67 WPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLKKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLM 146 (454)
Q Consensus 67 ~PlilWlnGGPGcSS~~~G~f~E~GP~~~~~~~n~~SW~~~anvLfiDqPvGtGfSy~~~~~~~~~~~~~~A~d~~~fL~ 146 (454)
.|.||+++|.||.+..+ -.+. + .. +..+++-+|.| |-|.|.... ..+-++.|+++.+++.
T Consensus 2 ~p~vvllHG~~~~~~~w-~~~~------------~-~l-~~~~vi~~D~~-G~G~S~~~~----~~~~~~~~~~l~~~l~ 61 (242)
T PRK11126 2 LPWLVFLHGLLGSGQDW-QPVG------------E-AL-PDYPRLYIDLP-GHGGSAAIS----VDGFADVSRLLSQTLQ 61 (242)
T ss_pred CCEEEEECCCCCChHHH-HHHH------------H-Hc-CCCCEEEecCC-CCCCCCCcc----ccCHHHHHHHHHHHHH
Confidence 38899999999988763 2111 1 11 24899999999 999885321 2356677777777775
Q ss_pred HHHHhccccCCCCEEEEecccCcchhHHHHHHHHHHHHcCCceeeeeeeEecccC
Q 012900 147 ELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSW 201 (454)
Q Consensus 147 ~F~~~fP~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkGi~iGNg~ 201 (454)
. +...++++.|+|+||..+-.+|.+... + .++++++.++.
T Consensus 62 ~-------~~~~~~~lvG~S~Gg~va~~~a~~~~~-----~---~v~~lvl~~~~ 101 (242)
T PRK11126 62 S-------YNILPYWLVGYSLGGRIAMYYACQGLA-----G---GLCGLIVEGGN 101 (242)
T ss_pred H-------cCCCCeEEEEECHHHHHHHHHHHhCCc-----c---cccEEEEeCCC
Confidence 3 334799999999999888877754211 0 27788886543
No 36
>PRK10749 lysophospholipase L2; Provisional
Probab=97.44 E-value=0.00062 Score=67.78 Aligned_cols=131 Identities=12% Similarity=0.093 Sum_probs=82.5
Q ss_pred EEEEecCCceEEEEEEEcCCCCCCCCCCCCEEEEEcCCCChhhhhhccccccCCCcccCCCCccch-hccccceeecCCc
Q 012900 39 GYVEVRPKAHMFWWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTW-LKKADLLFVDNPV 117 (454)
Q Consensus 39 Gyv~v~~~~~lfywf~es~~~~~~p~~~~PlilWlnGGPGcSS~~~G~f~E~GP~~~~~~~n~~SW-~~~anvLfiDqPv 117 (454)
+++.-.++..++|+.++. .++ +|+||.++|-.+.+.. +.-+ . ..+ .+-.+++-+|.|
T Consensus 33 ~~~~~~~g~~l~~~~~~~----~~~---~~~vll~HG~~~~~~~-y~~~---~----------~~l~~~g~~v~~~D~~- 90 (330)
T PRK10749 33 AEFTGVDDIPIRFVRFRA----PHH---DRVVVICPGRIESYVK-YAEL---A----------YDLFHLGYDVLIIDHR- 90 (330)
T ss_pred eEEEcCCCCEEEEEEccC----CCC---CcEEEEECCccchHHH-HHHH---H----------HHHHHCCCeEEEEcCC-
Confidence 444444456788877753 122 3899999997654433 2111 0 012 234789999999
Q ss_pred ccccCCccCCC---CcccchHHHHHHHHHHHHHHHHhccccCCCCEEEEecccCcchhHHHHHHHHHHHHcCCceeeeee
Q 012900 118 GTGYSYVEDNS---SFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGG 194 (454)
Q Consensus 118 GtGfSy~~~~~---~~~~~~~~~A~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkG 194 (454)
|-|.|-..... ....+-++.++|+..+++.....++ ..++++.|+|.||..+-.+|.+- +-.++|
T Consensus 91 G~G~S~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~---~~~~~l~GhSmGG~ia~~~a~~~---------p~~v~~ 158 (330)
T PRK10749 91 GQGRSGRLLDDPHRGHVERFNDYVDDLAAFWQQEIQPGP---YRKRYALAHSMGGAILTLFLQRH---------PGVFDA 158 (330)
T ss_pred CCCCCCCCCCCCCcCccccHHHHHHHHHHHHHHHHhcCC---CCCeEEEEEcHHHHHHHHHHHhC---------CCCcce
Confidence 99998532111 1123567778888888876654433 47899999999998776666431 114789
Q ss_pred eEecccCCC
Q 012900 195 VALGDSWIS 203 (454)
Q Consensus 195 i~iGNg~~~ 203 (454)
+++.++...
T Consensus 159 lvl~~p~~~ 167 (330)
T PRK10749 159 IALCAPMFG 167 (330)
T ss_pred EEEECchhc
Confidence 999776543
No 37
>PRK03592 haloalkane dehalogenase; Provisional
Probab=97.42 E-value=0.00052 Score=66.87 Aligned_cols=103 Identities=19% Similarity=0.206 Sum_probs=73.4
Q ss_pred CEEEEEcCCCChhhhhhccccccCCCcccCCCCccchhccccceeecCCcccccCCccCCCCcccchHHHHHHHHHHHHH
Q 012900 68 PIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLKKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLME 147 (454)
Q Consensus 68 PlilWlnGGPGcSS~~~G~f~E~GP~~~~~~~n~~SW~~~anvLfiDqPvGtGfSy~~~~~~~~~~~~~~A~d~~~fL~~ 147 (454)
|.||.++|.|+.+..+- .+ --.+.+...++-+|.| |-|.|..... ..+..+.|+|+..+++.
T Consensus 28 ~~vvllHG~~~~~~~w~-~~-------------~~~L~~~~~via~D~~-G~G~S~~~~~---~~~~~~~a~dl~~ll~~ 89 (295)
T PRK03592 28 DPIVFLHGNPTSSYLWR-NI-------------IPHLAGLGRCLAPDLI-GMGASDKPDI---DYTFADHARYLDAWFDA 89 (295)
T ss_pred CEEEEECCCCCCHHHHH-HH-------------HHHHhhCCEEEEEcCC-CCCCCCCCCC---CCCHHHHHHHHHHHHHH
Confidence 78999999998887631 11 1134455689999999 9999854322 23667778887777764
Q ss_pred HHHhccccCCCCEEEEecccCcchhHHHHHHHHHHHHcCCceeeeeeeEecccCCCc
Q 012900 148 LFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWISP 204 (454)
Q Consensus 148 F~~~fP~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkGi~iGNg~~~p 204 (454)
. ...+++|.|+|.||..+-.+|.+--+ .++++++-|+...|
T Consensus 90 l-------~~~~~~lvGhS~Gg~ia~~~a~~~p~---------~v~~lil~~~~~~~ 130 (295)
T PRK03592 90 L-------GLDDVVLVGHDWGSALGFDWAARHPD---------RVRGIAFMEAIVRP 130 (295)
T ss_pred h-------CCCCeEEEEECHHHHHHHHHHHhChh---------heeEEEEECCCCCC
Confidence 3 34789999999999988877754322 48999998875544
No 38
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=97.35 E-value=0.00046 Score=63.90 Aligned_cols=103 Identities=26% Similarity=0.333 Sum_probs=65.8
Q ss_pred CEEEEEcCCCChhhhhhccccccCCCcccCCCCccchhccccceeecCCcccccCCccCCCCcccchHHHHHHHHHHHHH
Q 012900 68 PIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLKKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLME 147 (454)
Q Consensus 68 PlilWlnGGPGcSS~~~G~f~E~GP~~~~~~~n~~SW~~~anvLfiDqPvGtGfSy~~~~~~~~~~~~~~A~d~~~fL~~ 147 (454)
|.||.++|.+|.+.. +-.+. . ...+..+++-+|.| |.|.|..... ....+.++.++++ +..
T Consensus 2 ~~vv~~hG~~~~~~~-~~~~~-----------~--~L~~~~~v~~~d~~-g~G~s~~~~~-~~~~~~~~~~~~~---~~~ 62 (251)
T TIGR03695 2 PVLVFLHGFLGSGAD-WQALI-----------E--LLGPHFRCLAIDLP-GHGSSQSPDE-IERYDFEEAAQDI---LAT 62 (251)
T ss_pred CEEEEEcCCCCchhh-HHHHH-----------H--HhcccCeEEEEcCC-CCCCCCCCCc-cChhhHHHHHHHH---HHH
Confidence 789999998887765 21110 0 11245789999988 8898854211 1233455556552 222
Q ss_pred HHHhccccCCCCEEEEecccCcchhHHHHHHHHHHHHcCCceeeeeeeEecccC
Q 012900 148 LFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSW 201 (454)
Q Consensus 148 F~~~fP~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkGi~iGNg~ 201 (454)
+.+.+ ..++++|.|+|+||..+..+|.+.- -.++++++-++.
T Consensus 63 ~~~~~---~~~~~~l~G~S~Gg~ia~~~a~~~~---------~~v~~lil~~~~ 104 (251)
T TIGR03695 63 LLDQL---GIEPFFLVGYSMGGRIALYYALQYP---------ERVQGLILESGS 104 (251)
T ss_pred HHHHc---CCCeEEEEEeccHHHHHHHHHHhCc---------hheeeeEEecCC
Confidence 33322 3478999999999998888876531 257888886654
No 39
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=97.30 E-value=0.0046 Score=61.42 Aligned_cols=93 Identities=23% Similarity=0.253 Sum_probs=56.1
Q ss_pred CCCEEEEEcC-CCChhhhhhccccccCCCcccCCCCccchhccccceeecCCcccccCCccCCCCcccchHHHHHHHHHH
Q 012900 66 PWPIILWLQG-GPGASGVGIGNFEEVGPFDTYLKPRNSTWLKKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTL 144 (454)
Q Consensus 66 ~~PlilWlnG-GPGcSS~~~G~f~E~GP~~~~~~~n~~SW~~~anvLfiDqPvGtGfSy~~~~~~~~~~~~~~A~d~~~f 144 (454)
++|-||.++| |-++.+- .- .-.+.++....-++=||-| |-|+|-..+ ....-.+.+..+.
T Consensus 57 ~~~pvlllHGF~~~~~~w-~~------------~~~~L~~~~~~~v~aiDl~-G~g~~s~~~-----~~~~y~~~~~v~~ 117 (326)
T KOG1454|consen 57 DKPPVLLLHGFGASSFSW-RR------------VVPLLSKAKGLRVLAIDLP-GHGYSSPLP-----RGPLYTLRELVEL 117 (326)
T ss_pred CCCcEEEeccccCCcccH-hh------------hccccccccceEEEEEecC-CCCcCCCCC-----CCCceehhHHHHH
Confidence 4488899997 4444442 21 1123344434557889999 766432211 1222344555556
Q ss_pred HHHHHHhccccCCCCEEEEecccCcchhHHHHHHHH
Q 012900 145 LMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAV 180 (454)
Q Consensus 145 L~~F~~~fP~~~~~~~yi~GESYgG~yvP~lA~~i~ 180 (454)
++.|+. ++-..+++|.|+||||..+-.+|...-
T Consensus 118 i~~~~~---~~~~~~~~lvghS~Gg~va~~~Aa~~P 150 (326)
T KOG1454|consen 118 IRRFVK---EVFVEPVSLVGHSLGGIVALKAAAYYP 150 (326)
T ss_pred HHHHHH---hhcCcceEEEEeCcHHHHHHHHHHhCc
Confidence 666665 344578999999999999888886643
No 40
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=97.25 E-value=0.00064 Score=73.60 Aligned_cols=117 Identities=23% Similarity=0.336 Sum_probs=74.1
Q ss_pred CCceEEEEEEEcCCCCCCCCCCCCEEEEEcCCCChhhhhhccccccCCCcccCCCCc-cchhccccceeecCCcccccCC
Q 012900 45 PKAHMFWWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRN-STWLKKADLLFVDNPVGTGYSY 123 (454)
Q Consensus 45 ~~~~lfywf~es~~~~~~p~~~~PlilWlnGGPGcSS~~~G~f~E~GP~~~~~~~n~-~SW~~~anvLfiDqPvGtGfSy 123 (454)
++..+..|++.... .+|.++-|+|++++||| +++ .|. . ...+. .=+.+-..||+++-.--+||+.
T Consensus 374 dG~~i~~~l~~P~~--~~~~k~yP~i~~~hGGP--~~~-~~~-------~--~~~~~q~~~~~G~~V~~~n~RGS~GyG~ 439 (620)
T COG1506 374 DGETIHGWLYKPPG--FDPRKKYPLIVYIHGGP--SAQ-VGY-------S--FNPEIQVLASAGYAVLAPNYRGSTGYGR 439 (620)
T ss_pred CCCEEEEEEecCCC--CCCCCCCCEEEEeCCCC--ccc-ccc-------c--cchhhHHHhcCCeEEEEeCCCCCCccHH
Confidence 35688888887532 35655569999999999 444 441 0 11111 1245667888888554455543
Q ss_pred ccCCCCcccchHHHHHHHHHHHHHHHHhccccCCCCEEEEecccCcchhHHHH
Q 012900 124 VEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLG 176 (454)
Q Consensus 124 ~~~~~~~~~~~~~~A~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~lA 176 (454)
.-.....-.-=....+|+.++++ |+.+.|..-...+.|+|.||||...-.++
T Consensus 440 ~F~~~~~~~~g~~~~~D~~~~~~-~l~~~~~~d~~ri~i~G~SyGGymtl~~~ 491 (620)
T COG1506 440 EFADAIRGDWGGVDLEDLIAAVD-ALVKLPLVDPERIGITGGSYGGYMTLLAA 491 (620)
T ss_pred HHHHhhhhccCCccHHHHHHHHH-HHHhCCCcChHHeEEeccChHHHHHHHHH
Confidence 21000000011134577888888 99999988778899999999998766555
No 41
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=97.19 E-value=0.0028 Score=63.97 Aligned_cols=102 Identities=17% Similarity=0.108 Sum_probs=68.1
Q ss_pred CEEEEEcCCCChhhhhhccccccCCCcccCCCCccchhccccceeecCCcccccCCccCCCCcccchHHHHHHHHHHHHH
Q 012900 68 PIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLKKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLME 147 (454)
Q Consensus 68 PlilWlnGGPGcSS~~~G~f~E~GP~~~~~~~n~~SW~~~anvLfiDqPvGtGfSy~~~~~~~~~~~~~~A~d~~~fL~~ 147 (454)
|.||.|+|.|+.+..+. .+. -...+...++-+|.| |.|.|-.... ...+.++.++++.++|+.
T Consensus 89 p~lvllHG~~~~~~~w~-~~~-------------~~L~~~~~via~Dl~-G~G~S~~~~~--~~~~~~~~a~~l~~~l~~ 151 (360)
T PLN02679 89 PPVLLVHGFGASIPHWR-RNI-------------GVLAKNYTVYAIDLL-GFGASDKPPG--FSYTMETWAELILDFLEE 151 (360)
T ss_pred CeEEEECCCCCCHHHHH-HHH-------------HHHhcCCEEEEECCC-CCCCCCCCCC--ccccHHHHHHHHHHHHHH
Confidence 78899999988777632 111 123456799999999 9998853221 234667788888888764
Q ss_pred HHHhccccCCCCEEEEecccCcchhHHHHHHHHHHHHcCCceeeeeeeEecccC
Q 012900 148 LFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSW 201 (454)
Q Consensus 148 F~~~fP~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkGi~iGNg~ 201 (454)
. ...+++|.|+|+||..+-.+|..-. +-.++|+++-|+.
T Consensus 152 l-------~~~~~~lvGhS~Gg~ia~~~a~~~~--------P~rV~~LVLi~~~ 190 (360)
T PLN02679 152 V-------VQKPTVLIGNSVGSLACVIAASEST--------RDLVRGLVLLNCA 190 (360)
T ss_pred h-------cCCCeEEEEECHHHHHHHHHHHhcC--------hhhcCEEEEECCc
Confidence 3 2368999999999976554442110 1147888887654
No 42
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=97.10 E-value=0.0023 Score=65.03 Aligned_cols=105 Identities=19% Similarity=0.145 Sum_probs=70.8
Q ss_pred CCEEEEEcCCCChhhhhhccccccCCCcccCCCCccchhccccceeecCCcccccCCccCCC-CcccchHHHHHHHHHHH
Q 012900 67 WPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLKKADLLFVDNPVGTGYSYVEDNS-SFVKNDVEAANDLTTLL 145 (454)
Q Consensus 67 ~PlilWlnGGPGcSS~~~G~f~E~GP~~~~~~~n~~SW~~~anvLfiDqPvGtGfSy~~~~~-~~~~~~~~~A~d~~~fL 145 (454)
.|.||.++|.|+.+..+- -+. -...+..+|+-+|.| |.|+|...... ....+.++.++++.+++
T Consensus 127 ~~~ivllHG~~~~~~~w~-~~~-------------~~L~~~~~Via~Dlp-G~G~S~~p~~~~~~~ys~~~~a~~l~~~i 191 (383)
T PLN03084 127 NPPVLLIHGFPSQAYSYR-KVL-------------PVLSKNYHAIAFDWL-GFGFSDKPQPGYGFNYTLDEYVSSLESLI 191 (383)
T ss_pred CCeEEEECCCCCCHHHHH-HHH-------------HHHhcCCEEEEECCC-CCCCCCCCcccccccCCHHHHHHHHHHHH
Confidence 389999999988776532 111 123456799999999 99999643221 12346777888888888
Q ss_pred HHHHHhccccCCCCEEEEecccCcchhHHHHHHHHHHHHcCCceeeeeeeEecccCC
Q 012900 146 MELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWI 202 (454)
Q Consensus 146 ~~F~~~fP~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkGi~iGNg~~ 202 (454)
++. ...+++|.|+|+||..+-.+|.+- +-.++++++-|+..
T Consensus 192 ~~l-------~~~~~~LvG~s~GG~ia~~~a~~~---------P~~v~~lILi~~~~ 232 (383)
T PLN03084 192 DEL-------KSDKVSLVVQGYFSPPVVKYASAH---------PDKIKKLILLNPPL 232 (383)
T ss_pred HHh-------CCCCceEEEECHHHHHHHHHHHhC---------hHhhcEEEEECCCC
Confidence 654 235799999999996555554321 11488999977643
No 43
>PLN02965 Probable pheophorbidase
Probab=97.01 E-value=0.0024 Score=60.85 Aligned_cols=99 Identities=17% Similarity=0.150 Sum_probs=66.3
Q ss_pred EEEEcCCCChhhhhhccccccCCCcccCCCCccch-hccccceeecCCcccccCCccCCCCcccchHHHHHHHHHHHHHH
Q 012900 70 ILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTW-LKKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLMEL 148 (454)
Q Consensus 70 ilWlnGGPGcSS~~~G~f~E~GP~~~~~~~n~~SW-~~~anvLfiDqPvGtGfSy~~~~~~~~~~~~~~A~d~~~fL~~F 148 (454)
||.++|.++.+..+.. .--.. .+...|+-+|.| |.|.|-.... ...+.++.|+|+.+++..
T Consensus 6 vvllHG~~~~~~~w~~--------------~~~~L~~~~~~via~Dl~-G~G~S~~~~~--~~~~~~~~a~dl~~~l~~- 67 (255)
T PLN02965 6 FVFVHGASHGAWCWYK--------------LATLLDAAGFKSTCVDLT-GAGISLTDSN--TVSSSDQYNRPLFALLSD- 67 (255)
T ss_pred EEEECCCCCCcCcHHH--------------HHHHHhhCCceEEEecCC-cCCCCCCCcc--ccCCHHHHHHHHHHHHHh-
Confidence 8888998755544211 11123 334689999999 9999853221 234567778888887764
Q ss_pred HHhccccCC-CCEEEEecccCcchhHHHHHHHHHHHHcCCceeeeeeeEecccC
Q 012900 149 FNKNEILQK-SPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSW 201 (454)
Q Consensus 149 ~~~fP~~~~-~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkGi~iGNg~ 201 (454)
+.. +++++.|+|+||..+..+|.+.-+ .++++++-|+.
T Consensus 68 ------l~~~~~~~lvGhSmGG~ia~~~a~~~p~---------~v~~lvl~~~~ 106 (255)
T PLN02965 68 ------LPPDHKVILVGHSIGGGSVTEALCKFTD---------KISMAIYVAAA 106 (255)
T ss_pred ------cCCCCCEEEEecCcchHHHHHHHHhCch---------heeEEEEEccc
Confidence 222 599999999999988888754321 46788886653
No 44
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=96.85 E-value=0.0073 Score=58.17 Aligned_cols=133 Identities=11% Similarity=0.063 Sum_probs=77.9
Q ss_pred EEEecCCceEEEEEEEcCCCCCCCCCCCCEEEEEcCCCChhhhhhccccccCCCcccCCCCccchh-ccccceeecCCcc
Q 012900 40 YVEVRPKAHMFWWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWL-KKADLLFVDNPVG 118 (454)
Q Consensus 40 yv~v~~~~~lfywf~es~~~~~~p~~~~PlilWlnGGPGcSS~~~G~f~E~GP~~~~~~~n~~SW~-~~anvLfiDqPvG 118 (454)
|++.. ..++|.|+++.. ++ +.+|+||.++|-.+-..-..-.+ ..--..+. .-.+++-+|.| |
T Consensus 4 ~l~~~-~g~~~~~~~~p~----~~-~~~~~VlllHG~g~~~~~~~~~~----------~~la~~La~~Gy~Vl~~Dl~-G 66 (266)
T TIGR03101 4 FLDAP-HGFRFCLYHPPV----AV-GPRGVVIYLPPFAEEMNKSRRMV----------ALQARAFAAGGFGVLQIDLY-G 66 (266)
T ss_pred EecCC-CCcEEEEEecCC----CC-CCceEEEEECCCcccccchhHHH----------HHHHHHHHHCCCEEEEECCC-C
Confidence 34433 357889898742 11 12489999998432110000000 00001233 34789999999 9
Q ss_pred cccCCccCCCCcccchHHHHHHHHHHHHHHHHhccccCCCCEEEEecccCcchhHHHHHHHHHHHHcCCceeeeeeeEec
Q 012900 119 TGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALG 198 (454)
Q Consensus 119 tGfSy~~~~~~~~~~~~~~A~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkGi~iG 198 (454)
.|.|-.... ..+.+...+|+..+++ |++... ..+++|.|+|.||..+..+|.+. +-.++++++-
T Consensus 67 ~G~S~g~~~---~~~~~~~~~Dv~~ai~-~L~~~~---~~~v~LvG~SmGG~vAl~~A~~~---------p~~v~~lVL~ 130 (266)
T TIGR03101 67 CGDSAGDFA---AARWDVWKEDVAAAYR-WLIEQG---HPPVTLWGLRLGALLALDAANPL---------AAKCNRLVLW 130 (266)
T ss_pred CCCCCCccc---cCCHHHHHHHHHHHHH-HHHhcC---CCCEEEEEECHHHHHHHHHHHhC---------ccccceEEEe
Confidence 998864321 1234455666665543 444322 36899999999999988776432 1257888887
Q ss_pred ccCCCch
Q 012900 199 DSWISPE 205 (454)
Q Consensus 199 Ng~~~p~ 205 (454)
+|.++-.
T Consensus 131 ~P~~~g~ 137 (266)
T TIGR03101 131 QPVVSGK 137 (266)
T ss_pred ccccchH
Confidence 7777644
No 45
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=96.80 E-value=0.0054 Score=63.04 Aligned_cols=80 Identities=15% Similarity=0.213 Sum_probs=53.4
Q ss_pred cccceeecCCcccccCCccCCCCcccchHHHHHHHHHHHHHHHHhccccCCCCEEEEecccCcchhHHHHHHHHHHHHcC
Q 012900 107 KADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAG 186 (454)
Q Consensus 107 ~anvLfiDqPvGtGfSy~~~~~~~~~~~~~~A~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~ 186 (454)
-.+||-+|.| |.|.|.... ...+... ....+..++...|.....++.|+|.|+||.+++.+|..-
T Consensus 222 Gy~vl~~D~p-G~G~s~~~~---~~~d~~~----~~~avld~l~~~~~vd~~ri~l~G~S~GG~~Al~~A~~~------- 286 (414)
T PRK05077 222 GIAMLTIDMP-SVGFSSKWK---LTQDSSL----LHQAVLNALPNVPWVDHTRVAAFGFRFGANVAVRLAYLE------- 286 (414)
T ss_pred CCEEEEECCC-CCCCCCCCC---ccccHHH----HHHHHHHHHHhCcccCcccEEEEEEChHHHHHHHHHHhC-------
Confidence 3789999999 999985321 1111111 223444566666766678899999999999999887431
Q ss_pred CceeeeeeeEecccCCC
Q 012900 187 KLKLKLGGVALGDSWIS 203 (454)
Q Consensus 187 ~~~inLkGi~iGNg~~~ 203 (454)
+-.++++++.+|.++
T Consensus 287 --p~ri~a~V~~~~~~~ 301 (414)
T PRK05077 287 --PPRLKAVACLGPVVH 301 (414)
T ss_pred --CcCceEEEEECCccc
Confidence 114788888666654
No 46
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=96.78 E-value=0.0044 Score=59.95 Aligned_cols=104 Identities=15% Similarity=0.070 Sum_probs=65.7
Q ss_pred CCCCEEEEEcCCCChhhhhhccccccCCCcccCCCCccchh-ccccceeecCCcccccCCccCCCCcccchHHHHHHHHH
Q 012900 65 KPWPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWL-KKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTT 143 (454)
Q Consensus 65 ~~~PlilWlnGGPGcSS~~~G~f~E~GP~~~~~~~n~~SW~-~~anvLfiDqPvGtGfSy~~~~~~~~~~~~~~A~d~~~ 143 (454)
+++|.||+++|..+.+..+ ..+. .... +..+++-+|.| |.|.|..... ...+.++.++++.+
T Consensus 16 ~~~p~vvliHG~~~~~~~w-~~~~-------------~~L~~~g~~vi~~dl~-g~G~s~~~~~--~~~~~~~~~~~l~~ 78 (273)
T PLN02211 16 RQPPHFVLIHGISGGSWCW-YKIR-------------CLMENSGYKVTCIDLK-SAGIDQSDAD--SVTTFDEYNKPLID 78 (273)
T ss_pred CCCCeEEEECCCCCCcCcH-HHHH-------------HHHHhCCCEEEEeccc-CCCCCCCCcc--cCCCHHHHHHHHHH
Confidence 3459999999977666542 1110 0111 24689999999 8887743211 12466666776666
Q ss_pred HHHHHHHhccccCCCCEEEEecccCcchhHHHHHHHHHHHHcCCceeeeeeeEeccc
Q 012900 144 LLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDS 200 (454)
Q Consensus 144 fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkGi~iGNg 200 (454)
+++. ... .++++|.|+||||..+-.++.+.-+ .++++++-++
T Consensus 79 ~i~~----l~~--~~~v~lvGhS~GG~v~~~~a~~~p~---------~v~~lv~~~~ 120 (273)
T PLN02211 79 FLSS----LPE--NEKVILVGHSAGGLSVTQAIHRFPK---------KICLAVYVAA 120 (273)
T ss_pred HHHh----cCC--CCCEEEEEECchHHHHHHHHHhChh---------heeEEEEecc
Confidence 6653 211 4799999999999987777643211 4677777544
No 47
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=96.70 E-value=0.007 Score=56.09 Aligned_cols=28 Identities=11% Similarity=0.075 Sum_probs=23.9
Q ss_pred eEEEEeccCCCCCChhhHHHHHHhcccc
Q 012900 367 NVTVYNGQLDVICSTKGTEAWIEKLKWD 394 (454)
Q Consensus 367 rVLiy~Gd~D~i~n~~G~~~~i~~L~W~ 394 (454)
+++|.+|..|.+||....+...+.|+.-
T Consensus 170 ~~~i~hG~~D~vVp~~~~~~~~~~l~~~ 197 (212)
T TIGR01840 170 IMSVVHGDADYTVLPGNADEIRDAMLKV 197 (212)
T ss_pred eEEEEEcCCCceeCcchHHHHHHHHHHh
Confidence 4789999999999999998888888754
No 48
>PLN02872 triacylglycerol lipase
Probab=96.63 E-value=0.045 Score=55.85 Aligned_cols=127 Identities=17% Similarity=0.065 Sum_probs=71.7
Q ss_pred CCceeeEEEEecCCceEEEEEEEcCCCCCCCCCCCCEEEEEcCCCChhhhhhccccccCCCcccCCCCccchh-ccccce
Q 012900 33 DASEEWGYVEVRPKAHMFWWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWL-KKADLL 111 (454)
Q Consensus 33 ~~~~~sGyv~v~~~~~lfywf~es~~~~~~p~~~~PlilWlnGGPGcSS~~~G~f~E~GP~~~~~~~n~~SW~-~~anvL 111 (454)
+++.+.=+|+..++-.+-.+-+........+ ..+|.|+.++|..++|..+ . -++|-+- -.+-.. +-..|.
T Consensus 41 gy~~e~h~v~T~DGy~L~l~ri~~~~~~~~~-~~~~~Vll~HGl~~ss~~w-~---~~~~~~s----la~~La~~GydV~ 111 (395)
T PLN02872 41 GYSCTEHTIQTKDGYLLALQRVSSRNPRLGS-QRGPPVLLQHGLFMAGDAW-F---LNSPEQS----LGFILADHGFDVW 111 (395)
T ss_pred CCCceEEEEECCCCcEEEEEEcCCCCCCCCC-CCCCeEEEeCcccccccce-e---ecCcccc----hHHHHHhCCCCcc
Confidence 4555555677766644444444432110112 2348999999988887763 1 1122100 001112 234666
Q ss_pred eecCCcccccCCccCC-----CC-cccchHHHH-HHHHHHHHHHHHhccccCCCCEEEEecccCcchhH
Q 012900 112 FVDNPVGTGYSYVEDN-----SS-FVKNDVEAA-NDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAA 173 (454)
Q Consensus 112 fiDqPvGtGfSy~~~~-----~~-~~~~~~~~A-~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP 173 (454)
-.|.. |.|+|+.... .. ...+-++.| .|+-++++...+.. ..++++.|+|.||..+-
T Consensus 112 l~n~R-G~~~s~gh~~~~~~~~~fw~~s~~e~a~~Dl~a~id~i~~~~----~~~v~~VGhS~Gg~~~~ 175 (395)
T PLN02872 112 VGNVR-GTRWSYGHVTLSEKDKEFWDWSWQELALYDLAEMIHYVYSIT----NSKIFIVGHSQGTIMSL 175 (395)
T ss_pred ccccc-ccccccCCCCCCccchhccCCcHHHHHHHHHHHHHHHHHhcc----CCceEEEEECHHHHHHH
Confidence 67776 8888865321 11 123455666 78888888776432 36899999999997554
No 49
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=96.58 E-value=0.0077 Score=60.50 Aligned_cols=100 Identities=19% Similarity=0.122 Sum_probs=66.4
Q ss_pred CCEEEEEcCCCChhhhhhccccccCCCcccCCCCccchhccccceeecCCcccccCCccCCCCcccchHHHHHHHHHHHH
Q 012900 67 WPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLKKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLM 146 (454)
Q Consensus 67 ~PlilWlnGGPGcSS~~~G~f~E~GP~~~~~~~n~~SW~~~anvLfiDqPvGtGfSy~~~~~~~~~~~~~~A~d~~~fL~ 146 (454)
.|.+|+++|.+|.+.. +..+.+ ...+..+++-+|.| |.|.|-... ...+.++.++++.++++
T Consensus 131 ~~~vl~~HG~~~~~~~-~~~~~~-------------~l~~~~~v~~~d~~-g~G~s~~~~---~~~~~~~~~~~~~~~~~ 192 (371)
T PRK14875 131 GTPVVLIHGFGGDLNN-WLFNHA-------------ALAAGRPVIALDLP-GHGASSKAV---GAGSLDELAAAVLAFLD 192 (371)
T ss_pred CCeEEEECCCCCccch-HHHHHH-------------HHhcCCEEEEEcCC-CCCCCCCCC---CCCCHHHHHHHHHHHHH
Confidence 3889999999888776 322211 12233789999999 999884321 23456666776666654
Q ss_pred HHHHhccccCCCCEEEEecccCcchhHHHHHHHHHHHHcCCceeeeeeeEeccc
Q 012900 147 ELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDS 200 (454)
Q Consensus 147 ~F~~~fP~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkGi~iGNg 200 (454)
. +...+++|.|+|+||..+..+|.+- +-.++++++-++
T Consensus 193 ~-------~~~~~~~lvG~S~Gg~~a~~~a~~~---------~~~v~~lv~~~~ 230 (371)
T PRK14875 193 A-------LGIERAHLVGHSMGGAVALRLAARA---------PQRVASLTLIAP 230 (371)
T ss_pred h-------cCCccEEEEeechHHHHHHHHHHhC---------chheeEEEEECc
Confidence 3 3346899999999999998887542 114677776544
No 50
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=96.56 E-value=0.014 Score=69.96 Aligned_cols=103 Identities=20% Similarity=0.233 Sum_probs=69.9
Q ss_pred CCEEEEEcCCCChhhhhhccccccCCCcccCCCCccchhccccceeecCCcccccCCccCC-----CCcccchHHHHHHH
Q 012900 67 WPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLKKADLLFVDNPVGTGYSYVEDN-----SSFVKNDVEAANDL 141 (454)
Q Consensus 67 ~PlilWlnGGPGcSS~~~G~f~E~GP~~~~~~~n~~SW~~~anvLfiDqPvGtGfSy~~~~-----~~~~~~~~~~A~d~ 141 (454)
.|.||+|+|.+|.+..+..++ ....+..+++.+|.| |-|.|..... .....+.+..|+++
T Consensus 1371 ~~~vVllHG~~~s~~~w~~~~--------------~~L~~~~rVi~~Dl~-G~G~S~~~~~~~~~~~~~~~si~~~a~~l 1435 (1655)
T PLN02980 1371 GSVVLFLHGFLGTGEDWIPIM--------------KAISGSARCISIDLP-GHGGSKIQNHAKETQTEPTLSVELVADLL 1435 (1655)
T ss_pred CCeEEEECCCCCCHHHHHHHH--------------HHHhCCCEEEEEcCC-CCCCCCCccccccccccccCCHHHHHHHH
Confidence 389999999999987742111 122345789999999 9898854321 11234566777777
Q ss_pred HHHHHHHHHhccccCCCCEEEEecccCcchhHHHHHHHHHHHHcCCceeeeeeeEeccc
Q 012900 142 TTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDS 200 (454)
Q Consensus 142 ~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkGi~iGNg 200 (454)
.++++. +...+++|.|+|+||..+-.+|.+--+ .++++++-++
T Consensus 1436 ~~ll~~-------l~~~~v~LvGhSmGG~iAl~~A~~~P~---------~V~~lVlis~ 1478 (1655)
T PLN02980 1436 YKLIEH-------ITPGKVTLVGYSMGARIALYMALRFSD---------KIEGAVIISG 1478 (1655)
T ss_pred HHHHHH-------hCCCCEEEEEECHHHHHHHHHHHhChH---------hhCEEEEECC
Confidence 777653 234689999999999988887754322 4677777554
No 51
>PRK05855 short chain dehydrogenase; Validated
Probab=96.36 E-value=0.015 Score=62.14 Aligned_cols=101 Identities=14% Similarity=0.227 Sum_probs=66.3
Q ss_pred CceEEEEEEEcCCCCCCCCCCCCEEEEEcCCCChhhhhhccccccCCCcccCCCCccchhccccceeecCCcccccCCcc
Q 012900 46 KAHMFWWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLKKADLLFVDNPVGTGYSYVE 125 (454)
Q Consensus 46 ~~~lfywf~es~~~~~~p~~~~PlilWlnGGPGcSS~~~G~f~E~GP~~~~~~~n~~SW~~~anvLfiDqPvGtGfSy~~ 125 (454)
+..+.|+-+. ++ + .|.||.++|.++.+..+ .-+. --+.+...|+-+|.| |.|.|...
T Consensus 12 g~~l~~~~~g------~~-~-~~~ivllHG~~~~~~~w-~~~~-------------~~L~~~~~Vi~~D~~-G~G~S~~~ 68 (582)
T PRK05855 12 GVRLAVYEWG------DP-D-RPTVVLVHGYPDNHEVW-DGVA-------------PLLADRFRVVAYDVR-GAGRSSAP 68 (582)
T ss_pred CEEEEEEEcC------CC-C-CCeEEEEcCCCchHHHH-HHHH-------------HHhhcceEEEEecCC-CCCCCCCC
Confidence 4566665432 23 2 38999999998777652 2111 012345789999999 99999643
Q ss_pred CCCCcccchHHHHHHHHHHHHHHHHhccccCCCCEEEEecccCcchhHHHH
Q 012900 126 DNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLG 176 (454)
Q Consensus 126 ~~~~~~~~~~~~A~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~lA 176 (454)
... ...+.++.++|+..+++..- ..++++|.|+|+||..+-.++
T Consensus 69 ~~~-~~~~~~~~a~dl~~~i~~l~------~~~~~~lvGhS~Gg~~a~~~a 112 (582)
T PRK05855 69 KRT-AAYTLARLADDFAAVIDAVS------PDRPVHLLAHDWGSIQGWEAV 112 (582)
T ss_pred Ccc-cccCHHHHHHHHHHHHHHhC------CCCcEEEEecChHHHHHHHHH
Confidence 221 23467888889988887531 135799999999995544333
No 52
>PLN02511 hydrolase
Probab=96.26 E-value=0.042 Score=56.06 Aligned_cols=118 Identities=14% Similarity=0.123 Sum_probs=72.9
Q ss_pred eEEEEecCCceEEEEEEEcCCCCCCCCCCCCEEEEEcCCCChhhh-hhccccccCCCcccCCCCccchhccccceeecCC
Q 012900 38 WGYVEVRPKAHMFWWLYKSPYRIENPSKPWPIILWLQGGPGASGV-GIGNFEEVGPFDTYLKPRNSTWLKKADLLFVDNP 116 (454)
Q Consensus 38 sGyv~v~~~~~lfywf~es~~~~~~p~~~~PlilWlnGGPGcSS~-~~G~f~E~GP~~~~~~~n~~SW~~~anvLfiDqP 116 (454)
.-++...++..+.+..+..... ..+ .++|+||.|+|..|+|.. ..--+ -..-..+..+++-+|.|
T Consensus 73 re~l~~~DG~~~~ldw~~~~~~-~~~-~~~p~vvllHG~~g~s~~~y~~~~------------~~~~~~~g~~vv~~d~r 138 (388)
T PLN02511 73 RECLRTPDGGAVALDWVSGDDR-ALP-ADAPVLILLPGLTGGSDDSYVRHM------------LLRARSKGWRVVVFNSR 138 (388)
T ss_pred EEEEECCCCCEEEEEecCcccc-cCC-CCCCEEEEECCCCCCCCCHHHHHH------------HHHHHHCCCEEEEEecC
Confidence 3577777666665544432111 112 345999999999998742 11000 01112456789999999
Q ss_pred cccccCCccCCCCcccchHHHHHHHHHHHHHHHHhccccCCCCEEEEecccCcchhHHHH
Q 012900 117 VGTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLG 176 (454)
Q Consensus 117 vGtGfSy~~~~~~~~~~~~~~A~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~lA 176 (454)
|-|-|-......+ ....++|+.++++..-.++| +.++++.|+|.||..+-.++
T Consensus 139 -G~G~s~~~~~~~~---~~~~~~Dl~~~i~~l~~~~~---~~~~~lvG~SlGg~i~~~yl 191 (388)
T PLN02511 139 -GCADSPVTTPQFY---SASFTGDLRQVVDHVAGRYP---SANLYAAGWSLGANILVNYL 191 (388)
T ss_pred -CCCCCCCCCcCEE---cCCchHHHHHHHHHHHHHCC---CCCEEEEEechhHHHHHHHH
Confidence 8887754322211 23445677777777666665 47999999999998766555
No 53
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=96.12 E-value=0.071 Score=52.95 Aligned_cols=143 Identities=17% Similarity=0.229 Sum_probs=86.1
Q ss_pred EEEEecCCceEEEEEEEcCCCCCCCCCCCCEEEEEcCCCChhhhhhccccccCCCcccCCCCccch-hccccceeecCCc
Q 012900 39 GYVEVRPKAHMFWWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTW-LKKADLLFVDNPV 117 (454)
Q Consensus 39 Gyv~v~~~~~lfywf~es~~~~~~p~~~~PlilWlnGGPGcSS~~~G~f~E~GP~~~~~~~n~~SW-~~~anvLfiDqPv 117 (454)
.=|.+.+...++-+.|..+. ..+.+.+|++||++||=-|-+.-. . |+ .-+--++ .+.+|.+-|
T Consensus 64 ~dv~~~~~~~l~vRly~P~~--~~~~~~~p~lvyfHGGGf~~~S~~--~----~~----y~~~~~~~a~~~~~vvv---- 127 (336)
T KOG1515|consen 64 KDVTIDPFTNLPVRLYRPTS--SSSETKLPVLVYFHGGGFCLGSAN--S----PA----YDSFCTRLAAELNCVVV---- 127 (336)
T ss_pred eeeEecCCCCeEEEEEcCCC--CCcccCceEEEEEeCCccEeCCCC--C----ch----hHHHHHHHHHHcCeEEE----
Confidence 33444555789999998642 223134599999999987765410 0 00 0001122 255565533
Q ss_pred ccccCCccCCCCcccchHHHHHHHHHHHHH-HHHhccccCCCCEEEEecccCcchhHHHHHHHHHHHHcCCceeeeeeeE
Q 012900 118 GTGYSYVEDNSSFVKNDVEAANDLTTLLME-LFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVA 196 (454)
Q Consensus 118 GtGfSy~~~~~~~~~~~~~~A~d~~~fL~~-F~~~fP~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkGi~ 196 (454)
.++|--+-. ..++..-++.-+.+..++++ |....-..+ .++|+|.|-||..+-.+|++..+.- ..++.|+|++
T Consensus 128 SVdYRLAPE-h~~Pa~y~D~~~Al~w~~~~~~~~~~~D~~--rv~l~GDSaGGNia~~va~r~~~~~---~~~~ki~g~i 201 (336)
T KOG1515|consen 128 SVDYRLAPE-HPFPAAYDDGWAALKWVLKNSWLKLGADPS--RVFLAGDSAGGNIAHVVAQRAADEK---LSKPKIKGQI 201 (336)
T ss_pred ecCcccCCC-CCCCccchHHHHHHHHHHHhHHHHhCCCcc--cEEEEccCccHHHHHHHHHHHhhcc---CCCcceEEEE
Confidence 445444432 23444444444445555555 776555542 3999999999999999999887632 2457899999
Q ss_pred ecccCCC
Q 012900 197 LGDSWIS 203 (454)
Q Consensus 197 iGNg~~~ 203 (454)
+--|+..
T Consensus 202 li~P~~~ 208 (336)
T KOG1515|consen 202 LIYPFFQ 208 (336)
T ss_pred EEecccC
Confidence 9555543
No 54
>PLN02442 S-formylglutathione hydrolase
Probab=96.08 E-value=0.038 Score=53.75 Aligned_cols=56 Identities=29% Similarity=0.296 Sum_probs=36.6
Q ss_pred HHHHHHHHHHHHHHhccccCCCCEEEEecccCcchhHHHHHHHHHHHHcCCceeeeeeeEecccCCCc
Q 012900 137 AANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWISP 204 (454)
Q Consensus 137 ~A~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkGi~iGNg~~~p 204 (454)
..+++...+.+++.. +...+++|+|.|+||+-+-.+|.+-. =.+++++..+|..+|
T Consensus 125 ~~~~l~~~i~~~~~~---~~~~~~~i~G~S~GG~~a~~~a~~~p---------~~~~~~~~~~~~~~~ 180 (283)
T PLN02442 125 VVKELPKLLSDNFDQ---LDTSRASIFGHSMGGHGALTIYLKNP---------DKYKSVSAFAPIANP 180 (283)
T ss_pred HHHHHHHHHHHHHHh---cCCCceEEEEEChhHHHHHHHHHhCc---------hhEEEEEEECCccCc
Confidence 344455555555543 34467999999999987666654311 137888888888775
No 55
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=95.97 E-value=0.042 Score=53.91 Aligned_cols=136 Identities=18% Similarity=0.278 Sum_probs=89.7
Q ss_pred eeEEEEecCCceEEEEEEEcCCCCCCCCCCCCEEEEEcCCCChhhhhhccccccCCCcccCCCCccchhccccceeecCC
Q 012900 37 EWGYVEVRPKAHMFWWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLKKADLLFVDNP 116 (454)
Q Consensus 37 ~sGyv~v~~~~~lfywf~es~~~~~~p~~~~PlilWlnGGPGcSS~~~G~f~E~GP~~~~~~~n~~SW~~~anvLfiDqP 116 (454)
..|+....++..++|+.++.. .+| + .+|++++|.=.++.- +--+. +.==..-..|+=+|+|
T Consensus 10 ~~~~~~~~d~~~~~~~~~~~~---~~~-~--g~Vvl~HG~~Eh~~r-y~~la------------~~l~~~G~~V~~~D~R 70 (298)
T COG2267 10 TEGYFTGADGTRLRYRTWAAP---EPP-K--GVVVLVHGLGEHSGR-YEELA------------DDLAARGFDVYALDLR 70 (298)
T ss_pred ccceeecCCCceEEEEeecCC---CCC-C--cEEEEecCchHHHHH-HHHHH------------HHHHhCCCEEEEecCC
Confidence 346666666779999999853 222 2 799999988776654 31110 0111234567889999
Q ss_pred cccccCCccCCCCcccchHHHHHHHHHHHHHHHHhccccCCCCEEEEecccCcchhHHHHHHHHHHHHcCCceeeeeeeE
Q 012900 117 VGTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVA 196 (454)
Q Consensus 117 vGtGfSy~~~~~~~~~~~~~~A~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkGi~ 196 (454)
|-|-|.. .......+-.+.-.|+-.|++..-+.+| ..|++|+|+|-||-.+...+.... -.++|++
T Consensus 71 -GhG~S~r-~~rg~~~~f~~~~~dl~~~~~~~~~~~~---~~p~~l~gHSmGg~Ia~~~~~~~~---------~~i~~~v 136 (298)
T COG2267 71 -GHGRSPR-GQRGHVDSFADYVDDLDAFVETIAEPDP---GLPVFLLGHSMGGLIALLYLARYP---------PRIDGLV 136 (298)
T ss_pred -CCCCCCC-CCcCCchhHHHHHHHHHHHHHHHhccCC---CCCeEEEEeCcHHHHHHHHHHhCC---------ccccEEE
Confidence 9999972 1222334455666667677766655444 479999999999988777664432 3799999
Q ss_pred ecccCCCch
Q 012900 197 LGDSWISPE 205 (454)
Q Consensus 197 iGNg~~~p~ 205 (454)
|-+|++.+.
T Consensus 137 LssP~~~l~ 145 (298)
T COG2267 137 LSSPALGLG 145 (298)
T ss_pred EECccccCC
Confidence 988877643
No 56
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=95.96 E-value=0.022 Score=56.95 Aligned_cols=75 Identities=19% Similarity=0.151 Sum_probs=51.7
Q ss_pred ccccceeecCCcccccCCccCCCCcccchHHHHHHHHHHHHHHHHhccccCCCCEEEEecccCcchhHHHHHHHHHHHHc
Q 012900 106 KKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEA 185 (454)
Q Consensus 106 ~~anvLfiDqPvGtGfSy~~~~~~~~~~~~~~A~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~ 185 (454)
+...||.+|.| |-|-|. .. ..+.++.|+|+.++|+.. .. ++.+.|.|.|+||..+-.+|.+--+
T Consensus 98 ~~~~Vi~~Dl~-G~g~s~--~~---~~~~~~~a~dl~~ll~~l-----~l-~~~~~lvG~SmGG~vA~~~A~~~P~---- 161 (343)
T PRK08775 98 ARFRLLAFDFI-GADGSL--DV---PIDTADQADAIALLLDAL-----GI-ARLHAFVGYSYGALVGLQFASRHPA---- 161 (343)
T ss_pred cccEEEEEeCC-CCCCCC--CC---CCCHHHHHHHHHHHHHHc-----CC-CcceEEEEECHHHHHHHHHHHHChH----
Confidence 56889999999 666442 11 234566788888877643 11 2346899999999988888865322
Q ss_pred CCceeeeeeeEecccC
Q 012900 186 GKLKLKLGGVALGDSW 201 (454)
Q Consensus 186 ~~~~inLkGi~iGNg~ 201 (454)
.++++++.++.
T Consensus 162 -----~V~~LvLi~s~ 172 (343)
T PRK08775 162 -----RVRTLVVVSGA 172 (343)
T ss_pred -----hhheEEEECcc
Confidence 47888886654
No 57
>PRK10566 esterase; Provisional
Probab=95.94 E-value=0.031 Score=52.78 Aligned_cols=95 Identities=17% Similarity=0.229 Sum_probs=57.4
Q ss_pred CCEEEEEcCCCChhhhhhccccccCCCcccCCCCccchhcc-ccceeecCCcccccCCccCCCCcc----cchHHHHHHH
Q 012900 67 WPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLKK-ADLLFVDNPVGTGYSYVEDNSSFV----KNDVEAANDL 141 (454)
Q Consensus 67 ~PlilWlnGGPGcSS~~~G~f~E~GP~~~~~~~n~~SW~~~-anvLfiDqPvGtGfSy~~~~~~~~----~~~~~~A~d~ 141 (454)
.|+||.++|++|.... ...+ .-.+.+. .+++.+|.| |.|-|+........ .......+++
T Consensus 27 ~p~vv~~HG~~~~~~~-~~~~-------------~~~l~~~G~~v~~~d~~-g~G~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (249)
T PRK10566 27 LPTVFFYHGFTSSKLV-YSYF-------------AVALAQAGFRVIMPDAP-MHGARFSGDEARRLNHFWQILLQNMQEF 91 (249)
T ss_pred CCEEEEeCCCCcccch-HHHH-------------HHHHHhCCCEEEEecCC-cccccCCCccccchhhHHHHHHHHHHHH
Confidence 4999999999887654 2111 1234443 689999988 77766432211100 0112334555
Q ss_pred HHHHHHHHHhccccCCCCEEEEecccCcchhHHHHH
Q 012900 142 TTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGL 177 (454)
Q Consensus 142 ~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~lA~ 177 (454)
..++. ++...+.....+++|+|+|+||..+..++.
T Consensus 92 ~~~~~-~l~~~~~~~~~~i~v~G~S~Gg~~al~~~~ 126 (249)
T PRK10566 92 PTLRA-AIREEGWLLDDRLAVGGASMGGMTALGIMA 126 (249)
T ss_pred HHHHH-HHHhcCCcCccceeEEeecccHHHHHHHHH
Confidence 44443 344444445678999999999998887764
No 58
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=95.92 E-value=0.063 Score=51.90 Aligned_cols=41 Identities=22% Similarity=0.230 Sum_probs=29.8
Q ss_pred cCCCCEEEEecccCcchhHHHHHHHHHHHHcCCceeeeeeeEecccCCCc
Q 012900 155 LQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWISP 204 (454)
Q Consensus 155 ~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkGi~iGNg~~~p 204 (454)
....+++|+|.|+||..+-.+|.+- . =.+++++..+|+.++
T Consensus 135 ~~~~~~~~~G~S~GG~~a~~~a~~~-----p----~~~~~~~~~~~~~~~ 175 (275)
T TIGR02821 135 LDGERQGITGHSMGGHGALVIALKN-----P----DRFKSVSAFAPIVAP 175 (275)
T ss_pred CCCCceEEEEEChhHHHHHHHHHhC-----c----ccceEEEEECCccCc
Confidence 4456899999999998777776432 1 136788888888765
No 59
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=95.88 E-value=0.013 Score=56.72 Aligned_cols=109 Identities=20% Similarity=0.214 Sum_probs=64.8
Q ss_pred CCEEEEEcCCCChh-hhhhccccccCCCcccCCCCccchhccccceeecCCcccccCCccCCCCcccchHHHHHHHHHHH
Q 012900 67 WPIILWLQGGPGAS-GVGIGNFEEVGPFDTYLKPRNSTWLKKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLL 145 (454)
Q Consensus 67 ~PlilWlnGGPGcS-S~~~G~f~E~GP~~~~~~~n~~SW~~~anvLfiDqPvGtGfSy~~~~~~~~~~~~~~A~d~~~fL 145 (454)
.|++|+++|-.|.. ..+.-. + .+.+.-....|++.||-+.+..-.|. ....+...+++++.++|
T Consensus 36 ~p~vilIHG~~~~~~~~~~~~----------l-~~~ll~~~~~nVi~vD~~~~~~~~y~----~a~~~~~~v~~~la~~l 100 (275)
T cd00707 36 RPTRFIIHGWTSSGEESWISD----------L-RKAYLSRGDYNVIVVDWGRGANPNYP----QAVNNTRVVGAELAKFL 100 (275)
T ss_pred CCcEEEEcCCCCCCCCcHHHH----------H-HHHHHhcCCCEEEEEECccccccChH----HHHHhHHHHHHHHHHHH
Confidence 48999999876644 111100 0 00111123589999998854211111 11234456677777777
Q ss_pred HHHHHhccccCCCCEEEEecccCcchhHHHHHHHHHHHHcCCceeeeeeeEeccc
Q 012900 146 MELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDS 200 (454)
Q Consensus 146 ~~F~~~fP~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkGi~iGNg 200 (454)
+...+.. .+...+++|.|+|.||+.+-.+|.+..+ +++.|+.-+|
T Consensus 101 ~~L~~~~-g~~~~~i~lIGhSlGa~vAg~~a~~~~~---------~v~~iv~LDP 145 (275)
T cd00707 101 DFLVDNT-GLSLENVHLIGHSLGAHVAGFAGKRLNG---------KLGRITGLDP 145 (275)
T ss_pred HHHHHhc-CCChHHEEEEEecHHHHHHHHHHHHhcC---------ccceeEEecC
Confidence 7665542 2334689999999999998888765421 5778877443
No 60
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=95.88 E-value=0.028 Score=51.54 Aligned_cols=104 Identities=27% Similarity=0.266 Sum_probs=62.5
Q ss_pred CCEEEEEcCCCChhhhhhccccccCCCcccCCCCccchhccccceeecCCcccccCCccCCCCcccchHHHHHHHHHHHH
Q 012900 67 WPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLKKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLM 146 (454)
Q Consensus 67 ~PlilWlnGGPGcSS~~~G~f~E~GP~~~~~~~n~~SW~~~anvLfiDqPvGtGfSy~~~~~~~~~~~~~~A~d~~~fL~ 146 (454)
.|.+++++|+|+++.... ...+. +...... .+++.+|+| |.|.|. .. ..+....++++..+++
T Consensus 21 ~~~i~~~hg~~~~~~~~~-~~~~~------~~~~~~~----~~~~~~d~~-g~g~s~-~~----~~~~~~~~~~~~~~~~ 83 (282)
T COG0596 21 GPPLVLLHGFPGSSSVWR-PVFKV------LPALAAR----YRVIAPDLR-GHGRSD-PA----GYSLSAYADDLAALLD 83 (282)
T ss_pred CCeEEEeCCCCCchhhhH-HHHHH------hhccccc----eEEEEeccc-CCCCCC-cc----cccHHHHHHHHHHHHH
Confidence 379999999999988732 20000 0011111 899999999 999996 10 1112222454544444
Q ss_pred HHHHhccccCCCCEEEEecccCcchhHHHHHHHHHHHHcCCceeeeeeeEecccCCC
Q 012900 147 ELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWIS 203 (454)
Q Consensus 147 ~F~~~fP~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkGi~iGNg~~~ 203 (454)
. +...++++.|+|+||..+-.++.+-.+ .++++++-++...
T Consensus 84 ----~---~~~~~~~l~G~S~Gg~~~~~~~~~~p~---------~~~~~v~~~~~~~ 124 (282)
T COG0596 84 ----A---LGLEKVVLVGHSMGGAVALALALRHPD---------RVRGLVLIGPAPP 124 (282)
T ss_pred ----H---hCCCceEEEEecccHHHHHHHHHhcch---------hhheeeEecCCCC
Confidence 2 222349999999998777666654322 4677777555544
No 61
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=95.77 E-value=0.013 Score=53.91 Aligned_cols=76 Identities=22% Similarity=0.207 Sum_probs=48.7
Q ss_pred cceeecCCcccccCCcc-CCCCcccchHHHHHHHHHHHHHHHHhccccCCCCEEEEecccCcchhHHHHHHHHHHHHcCC
Q 012900 109 DLLFVDNPVGTGYSYVE-DNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGK 187 (454)
Q Consensus 109 nvLfiDqPvGtGfSy~~-~~~~~~~~~~~~A~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~ 187 (454)
.|+-+|+| |.|+|... .......+.++ +.+.+..+.++.+. .++++.|.||||..+-.+|..--+
T Consensus 2 ~vi~~d~r-G~g~S~~~~~~~~~~~~~~~----~~~~~~~~~~~l~~---~~~~~vG~S~Gg~~~~~~a~~~p~------ 67 (230)
T PF00561_consen 2 DVILFDLR-GFGYSSPHWDPDFPDYTTDD----LAADLEALREALGI---KKINLVGHSMGGMLALEYAAQYPE------ 67 (230)
T ss_dssp EEEEEECT-TSTTSSSCCGSGSCTHCHHH----HHHHHHHHHHHHTT---SSEEEEEETHHHHHHHHHHHHSGG------
T ss_pred EEEEEeCC-CCCCCCCCccCCcccccHHH----HHHHHHHHHHHhCC---CCeEEEEECCChHHHHHHHHHCch------
Confidence 57889988 99999740 01112234444 44455555554433 459999999999888777643211
Q ss_pred ceeeeeeeEecccC
Q 012900 188 LKLKLGGVALGDSW 201 (454)
Q Consensus 188 ~~inLkGi~iGNg~ 201 (454)
.++++++-++.
T Consensus 68 ---~v~~lvl~~~~ 78 (230)
T PF00561_consen 68 ---RVKKLVLISPP 78 (230)
T ss_dssp ---GEEEEEEESES
T ss_pred ---hhcCcEEEeee
Confidence 68999886665
No 62
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=95.44 E-value=0.072 Score=51.49 Aligned_cols=108 Identities=18% Similarity=0.152 Sum_probs=67.9
Q ss_pred CEEEEEcCCCChhhhhhccccccCCCcccCCCCccchhc-cccceeecCCcccccCCccCCCCcccchHHHHHHHHHHHH
Q 012900 68 PIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLK-KADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLM 146 (454)
Q Consensus 68 PlilWlnGGPGcSS~~~G~f~E~GP~~~~~~~n~~SW~~-~anvLfiDqPvGtGfSy~~~~~~~~~~~~~~A~d~~~fL~ 146 (454)
|-+|.++||++...-..-.+.. ---.+.+ -.+++-+|.| |.|-|.... .+-++..+|+.++++
T Consensus 27 ~~vv~i~gg~~~~~g~~~~~~~----------la~~l~~~G~~v~~~Dl~-G~G~S~~~~-----~~~~~~~~d~~~~~~ 90 (274)
T TIGR03100 27 TGVLIVVGGPQYRVGSHRQFVL----------LARRLAEAGFPVLRFDYR-GMGDSEGEN-----LGFEGIDADIAAAID 90 (274)
T ss_pred CeEEEEeCCccccCCchhHHHH----------HHHHHHHCCCEEEEeCCC-CCCCCCCCC-----CCHHHHHHHHHHHHH
Confidence 6778888998643210000000 0113333 3789999999 999885321 244556777888887
Q ss_pred HHHHhccccCCCCEEEEecccCcchhHHHHHHHHHHHHcCCceeeeeeeEecccCCC
Q 012900 147 ELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWIS 203 (454)
Q Consensus 147 ~F~~~fP~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkGi~iGNg~~~ 203 (454)
.+-+..|.+ .++.++|.|.||..+-.+|.. .-.++|+++-|+++.
T Consensus 91 ~l~~~~~g~--~~i~l~G~S~Gg~~a~~~a~~----------~~~v~~lil~~p~~~ 135 (274)
T TIGR03100 91 AFREAAPHL--RRIVAWGLCDAASAALLYAPA----------DLRVAGLVLLNPWVR 135 (274)
T ss_pred HHHhhCCCC--CcEEEEEECHHHHHHHHHhhh----------CCCccEEEEECCccC
Confidence 665555554 469999999999765554421 125899999887743
No 63
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=95.34 E-value=0.095 Score=49.90 Aligned_cols=106 Identities=26% Similarity=0.415 Sum_probs=69.4
Q ss_pred CCCCEEEEEcCCCChhhhhhccccccCCCcccCCCCccchhccccceeecCCcccccCCccCCCCcccchHHHHHHHHHH
Q 012900 65 KPWPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLKKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTL 144 (454)
Q Consensus 65 ~~~PlilWlnGGPGcSS~~~G~f~E~GP~~~~~~~n~~SW~~~anvLfiDqPvGtGfSy~~~~~~~~~~~~~~A~d~~~f 144 (454)
+.-|+++.++|| |.|.|.++.|. -.+..+ . .--++-+|-- |.|=|..++.+ .-+.+..++|+...
T Consensus 72 t~gpil~l~HG~-G~S~LSfA~~a------~el~s~--~---~~r~~a~DlR-gHGeTk~~~e~--dlS~eT~~KD~~~~ 136 (343)
T KOG2564|consen 72 TEGPILLLLHGG-GSSALSFAIFA------SELKSK--I---RCRCLALDLR-GHGETKVENED--DLSLETMSKDFGAV 136 (343)
T ss_pred CCccEEEEeecC-cccchhHHHHH------HHHHhh--c---ceeEEEeecc-ccCccccCChh--hcCHHHHHHHHHHH
Confidence 445999999976 77766333221 000000 0 0112668865 89988777654 46888999999999
Q ss_pred HHHHHHhccccCCCCEEEEecccCcchhHHHHHHHHHHHHcCCceeeeeeeEe
Q 012900 145 LMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVAL 197 (454)
Q Consensus 145 L~~F~~~fP~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkGi~i 197 (454)
++++|..-|. ++.|.|+|.||-.+.+.|..- .--+|-|+.+
T Consensus 137 i~~~fge~~~----~iilVGHSmGGaIav~~a~~k--------~lpsl~Gl~v 177 (343)
T KOG2564|consen 137 IKELFGELPP----QIILVGHSMGGAIAVHTAASK--------TLPSLAGLVV 177 (343)
T ss_pred HHHHhccCCC----ceEEEeccccchhhhhhhhhh--------hchhhhceEE
Confidence 9999865443 699999999999886655311 1125888877
No 64
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=95.29 E-value=0.049 Score=54.26 Aligned_cols=96 Identities=21% Similarity=0.191 Sum_probs=62.8
Q ss_pred ccccceeecCCcccccCCccCC-CCcccchHHHHHHHHHHHHHHHHhc----------------cccC-CCCEEEEeccc
Q 012900 106 KKADLLFVDNPVGTGYSYVEDN-SSFVKNDVEAANDLTTLLMELFNKN----------------EILQ-KSPLFIVAESY 167 (454)
Q Consensus 106 ~~anvLfiDqPvGtGfSy~~~~-~~~~~~~~~~A~d~~~fL~~F~~~f----------------P~~~-~~~~yi~GESY 167 (454)
+-..|+-+|.| |.|.|-+.+. .....+-++.++|+..+++..-+.. .++. +.|++|.|+|.
T Consensus 73 ~G~~V~~~D~r-GHG~S~~~~~~~g~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~GhSm 151 (332)
T TIGR01607 73 NGYSVYGLDLQ-GHGESDGLQNLRGHINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIGLSM 151 (332)
T ss_pred CCCcEEEeccc-ccCCCccccccccchhhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeEeeccC
Confidence 45789999998 9999875422 2223466778888988887654310 0233 67999999999
Q ss_pred CcchhHHHHHHHHHHHHcCCceeeeeeeEecccCCC
Q 012900 168 GGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWIS 203 (454)
Q Consensus 168 gG~yvP~lA~~i~~~~~~~~~~inLkGi~iGNg~~~ 203 (454)
||..+..++.+..+..+ ..-...++|+++-.|.+.
T Consensus 152 Gg~i~~~~~~~~~~~~~-~~~~~~i~g~i~~s~~~~ 186 (332)
T TIGR01607 152 GGNIALRLLELLGKSNE-NNDKLNIKGCISLSGMIS 186 (332)
T ss_pred ccHHHHHHHHHhccccc-cccccccceEEEeccceE
Confidence 99988777654422100 001236899987666653
No 65
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=95.27 E-value=0.15 Score=51.72 Aligned_cols=126 Identities=16% Similarity=0.083 Sum_probs=74.3
Q ss_pred ceEEEEEEEcCCCCCCCCCCCCEEEEEcCCCChhhhhhcc----------cccc-CCCcccCCCCccchhccccceeecC
Q 012900 47 AHMFWWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGN----------FEEV-GPFDTYLKPRNSTWLKKADLLFVDN 115 (454)
Q Consensus 47 ~~lfywf~es~~~~~~p~~~~PlilWlnGGPGcSS~~~G~----------f~E~-GP~~~~~~~n~~SW~~~anvLfiDq 115 (454)
.+++|.-+-. .++ .+.|.||.++|-+|.+.. ... +..+ ||-. + --.+...||-+|.
T Consensus 33 ~~~~y~~~G~----~~~-~~~p~vvl~HG~~~~~~~-~~~~~~~~~~~~~w~~~~~~~~------~-l~~~~~~vi~~Dl 99 (379)
T PRK00175 33 VELAYETYGT----LNA-DRSNAVLICHALTGDHHV-AGPHSPDDPKPGWWDNMVGPGK------P-IDTDRYFVICSNV 99 (379)
T ss_pred ceEEEEeccc----cCC-CCCCEEEEeCCcCCchhh-cccccccCCCCcchhhccCCCC------c-cCccceEEEeccC
Confidence 4677765531 112 224999999999998764 221 1110 1100 0 0024568999999
Q ss_pred CcccccCCccCC------CC-----cccchHHHHHHHHHHHHHHHHhccccCCCC-EEEEecccCcchhHHHHHHHHHHH
Q 012900 116 PVGTGYSYVEDN------SS-----FVKNDVEAANDLTTLLMELFNKNEILQKSP-LFIVAESYGGKFAATLGLAAVKAI 183 (454)
Q Consensus 116 PvGtGfSy~~~~------~~-----~~~~~~~~A~d~~~fL~~F~~~fP~~~~~~-~yi~GESYgG~yvP~lA~~i~~~~ 183 (454)
|-+.|.|..... .. ...+.++.++++.++++.+ .-.+ .+|.|.|+||..+-.+|.+--+
T Consensus 100 ~G~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l-------~~~~~~~lvG~S~Gg~ia~~~a~~~p~-- 170 (379)
T PRK00175 100 LGGCKGSTGPSSINPDTGKPYGSDFPVITIRDWVRAQARLLDAL-------GITRLAAVVGGSMGGMQALEWAIDYPD-- 170 (379)
T ss_pred CCCCCCCCCCCCCCCCCCCcccCCCCcCCHHHHHHHHHHHHHHh-------CCCCceEEEEECHHHHHHHHHHHhChH--
Confidence 944455543210 00 1346667777777777642 2245 5899999999988888765322
Q ss_pred HcCCceeeeeeeEecccC
Q 012900 184 EAGKLKLKLGGVALGDSW 201 (454)
Q Consensus 184 ~~~~~~inLkGi~iGNg~ 201 (454)
.++++++.|+.
T Consensus 171 -------~v~~lvl~~~~ 181 (379)
T PRK00175 171 -------RVRSALVIASS 181 (379)
T ss_pred -------hhhEEEEECCC
Confidence 57888886653
No 66
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=94.86 E-value=0.066 Score=51.60 Aligned_cols=119 Identities=18% Similarity=0.206 Sum_probs=76.3
Q ss_pred EEEEecCCceEEEEEEEcCCCCCCCCCCCCEEEEEcCCCChhhhhhccccccCCCcccCCCCccchhccccceeecCCcc
Q 012900 39 GYVEVRPKAHMFWWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLKKADLLFVDNPVG 118 (454)
Q Consensus 39 Gyv~v~~~~~lfywf~es~~~~~~p~~~~PlilWlnGGPGcSS~~~G~f~E~GP~~~~~~~n~~SW~~~anvLfiDqPvG 118 (454)
-|++-..+..+|.-.+... +++ +.+-+|+.++|.=+-||-.+ .+.=. .+. ..-.-+--+|++ |
T Consensus 30 ~~~~n~rG~~lft~~W~p~---~~~-~pr~lv~~~HG~g~~~s~~~---~~~a~---~l~------~~g~~v~a~D~~-G 92 (313)
T KOG1455|consen 30 SFFTNPRGAKLFTQSWLPL---SGT-EPRGLVFLCHGYGEHSSWRY---QSTAK---RLA------KSGFAVYAIDYE-G 92 (313)
T ss_pred eeEEcCCCCEeEEEecccC---CCC-CCceEEEEEcCCcccchhhH---HHHHH---HHH------hCCCeEEEeecc-C
Confidence 3444434457777666532 122 33468999998666554212 10000 000 111235678998 9
Q ss_pred cccCCccCCCCcccchHHHHHHHHHHHHHHHHhccccCCCCEEEEecccCcchhHHHHH
Q 012900 119 TGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGL 177 (454)
Q Consensus 119 tGfSy~~~~~~~~~~~~~~A~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~lA~ 177 (454)
-|.|-+- ..+..+-+.+.+|+..|+..+- ..+++++.|.|++|||.||-.+-.++.
T Consensus 93 hG~SdGl--~~yi~~~d~~v~D~~~~~~~i~-~~~e~~~lp~FL~GeSMGGAV~Ll~~~ 148 (313)
T KOG1455|consen 93 HGRSDGL--HAYVPSFDLVVDDVISFFDSIK-EREENKGLPRFLFGESMGGAVALLIAL 148 (313)
T ss_pred CCcCCCC--cccCCcHHHHHHHHHHHHHHHh-hccccCCCCeeeeecCcchHHHHHHHh
Confidence 9999753 4578888999999988887665 456788899999999999987766654
No 67
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=94.68 E-value=0.43 Score=45.99 Aligned_cols=115 Identities=22% Similarity=0.352 Sum_probs=62.3
Q ss_pred EEEEecCCceEEEEEEEcCCCCCCCCCCCCEEEEEcCCCChhhhhhccccccCCCcccCCCCccchhcccc-----ceee
Q 012900 39 GYVEVRPKAHMFWWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLKKAD-----LLFV 113 (454)
Q Consensus 39 Gyv~v~~~~~lfywf~es~~~~~~p~~~~PlilWlnGGPGcSS~~~G~f~E~GP~~~~~~~n~~SW~~~an-----vLfi 113 (454)
+-+.+++ ...-||+|.-. .-|+. +||+|.|+|+=|..+- . .+-..|++.|. |+|-
T Consensus 38 ~s~~~~g-~~r~y~l~vP~---g~~~~-apLvv~LHG~~~sgag-~--------------~~~sg~d~lAd~~gFlV~yP 97 (312)
T COG3509 38 ASFDVNG-LKRSYRLYVPP---GLPSG-APLVVVLHGSGGSGAG-Q--------------LHGTGWDALADREGFLVAYP 97 (312)
T ss_pred cccccCC-CccceEEEcCC---CCCCC-CCEEEEEecCCCChHH-h--------------hcccchhhhhcccCcEEECc
Confidence 4455554 35667777643 23433 4999999998876653 2 12335555543 4554
Q ss_pred cC------CcccccCCccCCCCcccchHHHHHHHHHHHHHHHHhccccCCCCEEEEecccCcchhHHHHH
Q 012900 114 DN------PVGTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGL 177 (454)
Q Consensus 114 Dq------PvGtGfSy~~~~~~~~~~~~~~A~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~lA~ 177 (454)
|+ |-+.|-++..... ....+++ ..+.+.......+| ......+||+|=|=||.++-.++-
T Consensus 98 dg~~~~wn~~~~~~~~~p~~~--~~g~ddV-gflr~lva~l~~~~-gidp~RVyvtGlS~GG~Ma~~lac 163 (312)
T COG3509 98 DGYDRAWNANGCGNWFGPADR--RRGVDDV-GFLRALVAKLVNEY-GIDPARVYVTGLSNGGRMANRLAC 163 (312)
T ss_pred CccccccCCCcccccCCcccc--cCCccHH-HHHHHHHHHHHHhc-CcCcceEEEEeeCcHHHHHHHHHh
Confidence 41 3344444332211 1122222 22333333333333 234568999999999998777664
No 68
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=94.66 E-value=0.14 Score=52.81 Aligned_cols=79 Identities=14% Similarity=0.117 Sum_probs=51.5
Q ss_pred cccceeecCCcccccC-CccCCCCcccchHHHHHHHHHHHHHHHHhccccCCCCEEEEecccCcchhHHHHHHHHHHHHc
Q 012900 107 KADLLFVDNPVGTGYS-YVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEA 185 (454)
Q Consensus 107 ~anvLfiDqPvGtGfS-y~~~~~~~~~~~~~~A~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~ 185 (454)
..|||-+|-| |-|-| |.. ...+...+|+++.++++...+.. .+.-.+++|.|+|.|||.+-.+|.+. +
T Consensus 73 d~nVI~VDw~-g~g~s~y~~----a~~~t~~vg~~la~lI~~L~~~~-gl~l~~VhLIGHSLGAhIAg~ag~~~-----p 141 (442)
T TIGR03230 73 SANVIVVDWL-SRAQQHYPT----SAAYTKLVGKDVAKFVNWMQEEF-NYPWDNVHLLGYSLGAHVAGIAGSLT-----K 141 (442)
T ss_pred CCEEEEEECC-CcCCCCCcc----ccccHHHHHHHHHHHHHHHHHhh-CCCCCcEEEEEECHHHHHHHHHHHhC-----C
Confidence 4799999999 43433 211 12344677888888887554333 24457899999999999888776532 1
Q ss_pred CCceeeeeeeEeccc
Q 012900 186 GKLKLKLGGVALGDS 200 (454)
Q Consensus 186 ~~~~inLkGi~iGNg 200 (454)
-.|..|++-||
T Consensus 142 ----~rV~rItgLDP 152 (442)
T TIGR03230 142 ----HKVNRITGLDP 152 (442)
T ss_pred ----cceeEEEEEcC
Confidence 13666666554
No 69
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=94.22 E-value=0.025 Score=52.24 Aligned_cols=92 Identities=13% Similarity=0.100 Sum_probs=60.9
Q ss_pred hccccceeecCCcccccCCccCCCCcccchHHHHHHHHHHHHHHHHhccccCCCCEEEEecccCcchhHHHHHHHHHHHH
Q 012900 105 LKKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIE 184 (454)
Q Consensus 105 ~~~anvLfiDqPvGtGfSy~~~~~~~~~~~~~~A~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~ 184 (454)
.+-..|+.+|.+.+.||+..-........-....+|+.++++...++. ..-...+.|+|.||||+.+-.++..-
T Consensus 12 ~~Gy~v~~~~~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~-~iD~~ri~i~G~S~GG~~a~~~~~~~----- 85 (213)
T PF00326_consen 12 SQGYAVLVPNYRGSGGYGKDFHEAGRGDWGQADVDDVVAAIEYLIKQY-YIDPDRIGIMGHSYGGYLALLAATQH----- 85 (213)
T ss_dssp TTT-EEEEEE-TTSSSSHHHHHHTTTTGTTHHHHHHHHHHHHHHHHTT-SEEEEEEEEEEETHHHHHHHHHHHHT-----
T ss_pred hCCEEEEEEcCCCCCccchhHHHhhhccccccchhhHHHHHHHHhccc-cccceeEEEEcccccccccchhhccc-----
Confidence 355788999999888877642211122233456778888887665543 45567899999999999888776421
Q ss_pred cCCceeeeeeeEecccCCCchh
Q 012900 185 AGKLKLKLGGVALGDSWISPED 206 (454)
Q Consensus 185 ~~~~~inLkGi~iGNg~~~p~~ 206 (454)
+-.++.++.++|.+|+..
T Consensus 86 ----~~~f~a~v~~~g~~d~~~ 103 (213)
T PF00326_consen 86 ----PDRFKAAVAGAGVSDLFS 103 (213)
T ss_dssp ----CCGSSEEEEESE-SSTTC
T ss_pred ----ceeeeeeeccceecchhc
Confidence 124788999999988654
No 70
>PRK10985 putative hydrolase; Provisional
Probab=94.22 E-value=0.58 Score=46.31 Aligned_cols=119 Identities=15% Similarity=0.107 Sum_probs=60.4
Q ss_pred ceeeEEEEecCCceEEEEEEEcCCCCCCCCCCCCEEEEEcCCCChhhhhhccccccCCCcccCCCCccchh-ccccceee
Q 012900 35 SEEWGYVEVRPKAHMFWWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWL-KKADLLFV 113 (454)
Q Consensus 35 ~~~sGyv~v~~~~~lfywf~es~~~~~~p~~~~PlilWlnGGPGcSS~~~G~f~E~GP~~~~~~~n~~SW~-~~anvLfi 113 (454)
+.+.=.++..++..+.+++.+.. ..+ .++|+||.++|.+|.+...+.. . +. . ... +-.+++-+
T Consensus 30 ~~~~~~~~~~dg~~~~l~w~~~~---~~~-~~~p~vll~HG~~g~~~~~~~~--~-------~~--~-~l~~~G~~v~~~ 93 (324)
T PRK10985 30 TPYWQRLELPDGDFVDLAWSEDP---AQA-RHKPRLVLFHGLEGSFNSPYAH--G-------LL--E-AAQKRGWLGVVM 93 (324)
T ss_pred CcceeEEECCCCCEEEEecCCCC---ccC-CCCCEEEEeCCCCCCCcCHHHH--H-------HH--H-HHHHCCCEEEEE
Confidence 33444466666655554444321 122 3359999999999875431100 0 00 0 011 12357777
Q ss_pred cCCcccccCCccCCCCcccchHHHHHHHHHHHHHHHHhccccCCCCEEEEecccCcchhHHHH
Q 012900 114 DNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLG 176 (454)
Q Consensus 114 DqPvGtGfSy~~~~~~~~~~~~~~A~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~lA 176 (454)
|.+ |.|=|-......+... ..+|+..+++..-+++| ..++++.|+|.||..+-..+
T Consensus 94 d~r-G~g~~~~~~~~~~~~~---~~~D~~~~i~~l~~~~~---~~~~~~vG~S~GG~i~~~~~ 149 (324)
T PRK10985 94 HFR-GCSGEPNRLHRIYHSG---ETEDARFFLRWLQREFG---HVPTAAVGYSLGGNMLACLL 149 (324)
T ss_pred eCC-CCCCCccCCcceECCC---chHHHHHHHHHHHHhCC---CCCEEEEEecchHHHHHHHH
Confidence 877 6553321111111111 13444444443333344 36899999999998655444
No 71
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=94.00 E-value=0.22 Score=53.23 Aligned_cols=132 Identities=16% Similarity=0.109 Sum_probs=79.0
Q ss_pred ecCCceEEEEEEEcCCCCCCCCCCCCEEEEEcCCCChhhhhhccccccCCCcccCCCCccch-hccccceeecCCccccc
Q 012900 43 VRPKAHMFWWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTW-LKKADLLFVDNPVGTGY 121 (454)
Q Consensus 43 v~~~~~lfywf~es~~~~~~p~~~~PlilWlnGGPGcSS~~~G~f~E~GP~~~~~~~n~~SW-~~~anvLfiDqPvGtGf 121 (454)
.+++..|+...|..+ ++ +..|+||.++|-...+.. .... + .....-| .+-..++-+|.+ |.|.
T Consensus 3 ~~DG~~L~~~~~~P~----~~-~~~P~Il~~~gyg~~~~~-~~~~-~--------~~~~~~l~~~Gy~vv~~D~R-G~g~ 66 (550)
T TIGR00976 3 MRDGTRLAIDVYRPA----GG-GPVPVILSRTPYGKDAGL-RWGL-D--------KTEPAWFVAQGYAVVIQDTR-GRGA 66 (550)
T ss_pred CCCCCEEEEEEEecC----CC-CCCCEEEEecCCCCchhh-cccc-c--------cccHHHHHhCCcEEEEEecc-cccc
Confidence 345567877666531 12 235999999864332211 0000 0 0011123 246789999988 9999
Q ss_pred CCccCCCCcccchHHHHHHHHHHHHHHHHhccccCCCCEEEEecccCcchhHHHHHHHHHHHHcCCceeeeeeeEecccC
Q 012900 122 SYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSW 201 (454)
Q Consensus 122 Sy~~~~~~~~~~~~~~A~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkGi~iGNg~ 201 (454)
|-+... ..+ .+.++|+..+++ |+.+.|. .+.++.++|.||||..+-.+|.. ..-.|++++.-.++
T Consensus 67 S~g~~~---~~~-~~~~~D~~~~i~-~l~~q~~-~~~~v~~~G~S~GG~~a~~~a~~---------~~~~l~aiv~~~~~ 131 (550)
T TIGR00976 67 SEGEFD---LLG-SDEAADGYDLVD-WIAKQPW-CDGNVGMLGVSYLAVTQLLAAVL---------QPPALRAIAPQEGV 131 (550)
T ss_pred CCCceE---ecC-cccchHHHHHHH-HHHhCCC-CCCcEEEEEeChHHHHHHHHhcc---------CCCceeEEeecCcc
Confidence 975421 112 456677777776 6666553 34689999999999765555431 01268999988887
Q ss_pred CCch
Q 012900 202 ISPE 205 (454)
Q Consensus 202 ~~p~ 205 (454)
.|-.
T Consensus 132 ~d~~ 135 (550)
T TIGR00976 132 WDLY 135 (550)
T ss_pred cchh
Confidence 7643
No 72
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=93.56 E-value=0.27 Score=45.64 Aligned_cols=101 Identities=17% Similarity=0.179 Sum_probs=66.6
Q ss_pred EEEEEcCCCChhhhhhccccccCCCcccCCCCccchhc-cccceeecCCcccccCCccCCCCcccchHHHHHHHHHHHHH
Q 012900 69 IILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLK-KADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLME 147 (454)
Q Consensus 69 lilWlnGGPGcSS~~~G~f~E~GP~~~~~~~n~~SW~~-~anvLfiDqPvGtGfSy~~~~~~~~~~~~~~A~d~~~fL~~ 147 (454)
-|+++.+|=|.++....+- -...+ ..++..|+.| |-+ .......+-++.|+...+.++.
T Consensus 2 ~lf~~p~~gG~~~~y~~la--------------~~l~~~~~~v~~i~~~-~~~-----~~~~~~~si~~la~~y~~~I~~ 61 (229)
T PF00975_consen 2 PLFCFPPAGGSASSYRPLA--------------RALPDDVIGVYGIEYP-GRG-----DDEPPPDSIEELASRYAEAIRA 61 (229)
T ss_dssp EEEEESSTTCSGGGGHHHH--------------HHHTTTEEEEEEECST-TSC-----TTSHEESSHHHHHHHHHHHHHH
T ss_pred eEEEEcCCccCHHHHHHHH--------------HhCCCCeEEEEEEecC-CCC-----CCCCCCCCHHHHHHHHHHHhhh
Confidence 4788888878665421111 11222 4778899988 554 1223456888889877766653
Q ss_pred HHHhccccCCCCEEEEecccCcchhHHHHHHHHHHHHcCCceeeeeeeEecccC
Q 012900 148 LFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSW 201 (454)
Q Consensus 148 F~~~fP~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkGi~iGNg~ 201 (454)
..|+ .|++|+|.|+||..+=.+|.++.++ | .....+++-|+.
T Consensus 62 ---~~~~---gp~~L~G~S~Gg~lA~E~A~~Le~~---G---~~v~~l~liD~~ 103 (229)
T PF00975_consen 62 ---RQPE---GPYVLAGWSFGGILAFEMARQLEEA---G---EEVSRLILIDSP 103 (229)
T ss_dssp ---HTSS---SSEEEEEETHHHHHHHHHHHHHHHT---T----SESEEEEESCS
T ss_pred ---hCCC---CCeeehccCccHHHHHHHHHHHHHh---h---hccCceEEecCC
Confidence 3443 3999999999999999999887653 2 357788886643
No 73
>PLN00021 chlorophyllase
Probab=93.17 E-value=0.25 Score=48.81 Aligned_cols=111 Identities=17% Similarity=0.125 Sum_probs=62.7
Q ss_pred CCCEEEEEcCCCChhhhhhccccccCCCcccCCCCccchhc-cccceeecCCcccccCCccCCCCcccchHHHHHHHHHH
Q 012900 66 PWPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLK-KADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTL 144 (454)
Q Consensus 66 ~~PlilWlnGGPGcSS~~~G~f~E~GP~~~~~~~n~~SW~~-~anvLfiDqPvGtGfSy~~~~~~~~~~~~~~A~d~~~f 144 (454)
+.|+||+++|+.+.+.. +..+. + .+.+ -..++.+|.+ | ++... ...+.+.+.+++.+
T Consensus 51 ~~PvVv~lHG~~~~~~~-y~~l~------------~-~Las~G~~VvapD~~-g--~~~~~-----~~~~i~d~~~~~~~ 108 (313)
T PLN00021 51 TYPVLLFLHGYLLYNSF-YSQLL------------Q-HIASHGFIVVAPQLY-T--LAGPD-----GTDEIKDAAAVINW 108 (313)
T ss_pred CCCEEEEECCCCCCccc-HHHHH------------H-HHHhCCCEEEEecCC-C--cCCCC-----chhhHHHHHHHHHH
Confidence 35999999998766543 21110 0 1122 2567778876 3 32211 11222335556666
Q ss_pred HHHHHHh-cc---ccCCCCEEEEecccCcchhHHHHHHHHHHHHcCCceeeeeeeEecccCC
Q 012900 145 LMELFNK-NE---ILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWI 202 (454)
Q Consensus 145 L~~F~~~-fP---~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkGi~iGNg~~ 202 (454)
+.+-++. .| +....+++|+|+|.||+.+-.+|.+..+. .....+++++.-+++.
T Consensus 109 l~~~l~~~l~~~~~~d~~~v~l~GHS~GG~iA~~lA~~~~~~----~~~~~v~ali~ldPv~ 166 (313)
T PLN00021 109 LSSGLAAVLPEGVRPDLSKLALAGHSRGGKTAFALALGKAAV----SLPLKFSALIGLDPVD 166 (313)
T ss_pred HHhhhhhhcccccccChhheEEEEECcchHHHHHHHhhcccc----ccccceeeEEeecccc
Confidence 6654432 12 22336799999999999888877543221 1224678888766654
No 74
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=92.77 E-value=0.31 Score=41.36 Aligned_cols=95 Identities=18% Similarity=0.270 Sum_probs=59.0
Q ss_pred EEEEEcCCCChhhhhhccccccCCCcccCCCCccchhcc-ccceeecCCcccccCCccCCCCcccchHHHHHHHHHHHHH
Q 012900 69 IILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLKK-ADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLME 147 (454)
Q Consensus 69 lilWlnGGPGcSS~~~G~f~E~GP~~~~~~~n~~SW~~~-anvLfiDqPvGtGfSy~~~~~~~~~~~~~~A~d~~~fL~~ 147 (454)
+||+++|+.|.+.. +..+. ..+.+. .+++.+|.| |.|-+.. ...++++++.+.
T Consensus 1 ~vv~~HG~~~~~~~-~~~~~-------------~~l~~~G~~v~~~~~~-~~~~~~~----------~~~~~~~~~~~~- 54 (145)
T PF12695_consen 1 VVVLLHGWGGSRRD-YQPLA-------------EALAEQGYAVVAFDYP-GHGDSDG----------ADAVERVLADIR- 54 (145)
T ss_dssp EEEEECTTTTTTHH-HHHHH-------------HHHHHTTEEEEEESCT-TSTTSHH----------SHHHHHHHHHHH-
T ss_pred CEEEECCCCCCHHH-HHHHH-------------HHHHHCCCEEEEEecC-CCCccch----------hHHHHHHHHHHH-
Confidence 58999999876554 32221 133333 778888988 6665511 113333333332
Q ss_pred HHHhccccCCCCEEEEecccCcchhHHHHHHHHHHHHcCCceeeeeeeEecccCCC
Q 012900 148 LFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWIS 203 (454)
Q Consensus 148 F~~~fP~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkGi~iGNg~~~ 203 (454)
...+ ..++++|+|.|.||..+..++.+- -.++++++-+|+.+
T Consensus 55 --~~~~--~~~~i~l~G~S~Gg~~a~~~~~~~----------~~v~~~v~~~~~~~ 96 (145)
T PF12695_consen 55 --AGYP--DPDRIILIGHSMGGAIAANLAARN----------PRVKAVVLLSPYPD 96 (145)
T ss_dssp --HHHC--TCCEEEEEEETHHHHHHHHHHHHS----------TTESEEEEESESSG
T ss_pred --hhcC--CCCcEEEEEEccCcHHHHHHhhhc----------cceeEEEEecCccc
Confidence 3233 357999999999999888777521 25788888777543
No 75
>PRK10162 acetyl esterase; Provisional
Probab=92.69 E-value=0.37 Score=47.63 Aligned_cols=44 Identities=20% Similarity=0.030 Sum_probs=31.8
Q ss_pred CCCEEEEecccCcchhHHHHHHHHHHHHcCCceeeeeeeEecccCCC
Q 012900 157 KSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWIS 203 (454)
Q Consensus 157 ~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkGi~iGNg~~~ 203 (454)
..++.|+|+|.||+.+-.++....+. +.....++++++-.|+++
T Consensus 153 ~~~i~l~G~SaGG~la~~~a~~~~~~---~~~~~~~~~~vl~~p~~~ 196 (318)
T PRK10162 153 MSRIGFAGDSAGAMLALASALWLRDK---QIDCGKVAGVLLWYGLYG 196 (318)
T ss_pred hhHEEEEEECHHHHHHHHHHHHHHhc---CCCccChhheEEECCccC
Confidence 46799999999999998888765432 111235788888777665
No 76
>PRK10115 protease 2; Provisional
Probab=92.66 E-value=0.36 Score=52.97 Aligned_cols=138 Identities=15% Similarity=0.012 Sum_probs=73.4
Q ss_pred cCCceEEEEEEEcCCCCCCCCCCCCEEEEEcCCCChhhhhhccccccCCCcccCCCCccchhccccceeecCCccc-ccC
Q 012900 44 RPKAHMFWWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLKKADLLFVDNPVGT-GYS 122 (454)
Q Consensus 44 ~~~~~lfywf~es~~~~~~p~~~~PlilWlnGGPGcSS~~~G~f~E~GP~~~~~~~n~~SW~~~anvLfiDqPvGt-GfS 122 (454)
.++..+-.|++..+.. ... ...|+||+.+||||.|.. -++.. .--+|.+.-=++.+=.+-|. ||-
T Consensus 424 ~DG~~Ip~~l~~~~~~-~~~-~~~P~ll~~hGg~~~~~~-p~f~~-----------~~~~l~~rG~~v~~~n~RGs~g~G 489 (686)
T PRK10115 424 RDGVEVPVSLVYHRKH-FRK-GHNPLLVYGYGSYGASID-ADFSF-----------SRLSLLDRGFVYAIVHVRGGGELG 489 (686)
T ss_pred CCCCEEEEEEEEECCC-CCC-CCCCEEEEEECCCCCCCC-CCccH-----------HHHHHHHCCcEEEEEEcCCCCccC
Confidence 3344555555442211 112 234999999999999864 22111 11234444333333334443 332
Q ss_pred Cc--cCCCCcccchHHHHHHHHHHHHHHHHhccccCCCCEEEEecccCcchhHHHHHHHHHHHHcCCceeeeeeeEeccc
Q 012900 123 YV--EDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDS 200 (454)
Q Consensus 123 y~--~~~~~~~~~~~~~A~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkGi~iGNg 200 (454)
.. ..+.. ..-...-+|+....+... ...--....+.|.|-||||..+-.++..= +=-++.++.+.|
T Consensus 490 ~~w~~~g~~--~~k~~~~~D~~a~~~~Lv-~~g~~d~~rl~i~G~S~GG~l~~~~~~~~---------Pdlf~A~v~~vp 557 (686)
T PRK10115 490 QQWYEDGKF--LKKKNTFNDYLDACDALL-KLGYGSPSLCYGMGGSAGGMLMGVAINQR---------PELFHGVIAQVP 557 (686)
T ss_pred HHHHHhhhh--hcCCCcHHHHHHHHHHHH-HcCCCChHHeEEEEECHHHHHHHHHHhcC---------hhheeEEEecCC
Confidence 21 11100 011134566666665443 33333457799999999999665444211 114899999999
Q ss_pred CCCchhh
Q 012900 201 WISPEDF 207 (454)
Q Consensus 201 ~~~p~~~ 207 (454)
++|....
T Consensus 558 ~~D~~~~ 564 (686)
T PRK10115 558 FVDVVTT 564 (686)
T ss_pred chhHhhh
Confidence 9997654
No 77
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=92.57 E-value=0.44 Score=43.79 Aligned_cols=109 Identities=23% Similarity=0.315 Sum_probs=73.1
Q ss_pred CCEEEEEcCCCChhhhhhccccccCCCcccCCCCccchhccccceeecCCcccccCCccCCCCcccchHHHHHHHHHHHH
Q 012900 67 WPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLKKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLM 146 (454)
Q Consensus 67 ~PlilWlnGGPGcSS~~~G~f~E~GP~~~~~~~n~~SW~~~anvLfiDqPvGtGfSy~~~~~~~~~~~~~~A~d~~~fL~ 146 (454)
+|.+|+++|--|- | |.+. | .-+-.=-+-..||+-+|-- |-|-|.+.....--..|.++|-|
T Consensus 78 ~pTlLyfh~NAGN--m--Ghr~---~-----i~~~fy~~l~mnv~ivsYR-GYG~S~GspsE~GL~lDs~avld------ 138 (300)
T KOG4391|consen 78 RPTLLYFHANAGN--M--GHRL---P-----IARVFYVNLKMNVLIVSYR-GYGKSEGSPSEEGLKLDSEAVLD------ 138 (300)
T ss_pred CceEEEEccCCCc--c--cchh---h-----HHHHHHHHcCceEEEEEee-ccccCCCCccccceeccHHHHHH------
Confidence 4999999977654 3 3222 0 0011112345788889877 99988776332222344444433
Q ss_pred HHHHhccccCCCCEEEEecccCcchhHHHHHHHHHHHHcCCceeeeeeeEecccCCCc
Q 012900 147 ELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWISP 204 (454)
Q Consensus 147 ~F~~~fP~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkGi~iGNg~~~p 204 (454)
.+...|...++++.++|.|-||.-+-.+|.+-.+ .+.++|+-|-+++-
T Consensus 139 -yl~t~~~~dktkivlfGrSlGGAvai~lask~~~---------ri~~~ivENTF~SI 186 (300)
T KOG4391|consen 139 -YLMTRPDLDKTKIVLFGRSLGGAVAIHLASKNSD---------RISAIIVENTFLSI 186 (300)
T ss_pred -HHhcCccCCcceEEEEecccCCeeEEEeeccchh---------heeeeeeechhccc
Confidence 4456888889999999999999988888765432 58999999998874
No 78
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=92.54 E-value=0.059 Score=54.62 Aligned_cols=81 Identities=19% Similarity=0.251 Sum_probs=52.2
Q ss_pred ccccceeecCCcccccCCccCCCCcccchHHHHHHHHHHHHHHHHhccccCCCCEEEEecccCcchhHHHHHHHHHHHHc
Q 012900 106 KKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEA 185 (454)
Q Consensus 106 ~~anvLfiDqPvGtGfSy~~~~~~~~~~~~~~A~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~ 185 (454)
.-.+||=||=| |||+|.... ...+ .+.++..+-.|+...|+.-...+-++|-|+||.|++-+|..= .
T Consensus 217 rGiA~LtvDmP-G~G~s~~~~---l~~D----~~~l~~aVLd~L~~~p~VD~~RV~~~G~SfGGy~AvRlA~le-----~ 283 (411)
T PF06500_consen 217 RGIAMLTVDMP-GQGESPKWP---LTQD----SSRLHQAVLDYLASRPWVDHTRVGAWGFSFGGYYAVRLAALE-----D 283 (411)
T ss_dssp CT-EEEEE--T-TSGGGTTT----S-S-----CCHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHT-----T
T ss_pred CCCEEEEEccC-CCcccccCC---CCcC----HHHHHHHHHHHHhcCCccChhheEEEEeccchHHHHHHHHhc-----c
Confidence 34579999999 999985321 1111 234666677778888998888999999999999999887421 1
Q ss_pred CCceeeeeeeEecccCCC
Q 012900 186 GKLKLKLGGVALGDSWIS 203 (454)
Q Consensus 186 ~~~~inLkGi~iGNg~~~ 203 (454)
-.||+++.-.|.++
T Consensus 284 ----~RlkavV~~Ga~vh 297 (411)
T PF06500_consen 284 ----PRLKAVVALGAPVH 297 (411)
T ss_dssp ----TT-SEEEEES---S
T ss_pred ----cceeeEeeeCchHh
Confidence 15888776555554
No 79
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=92.25 E-value=0.24 Score=49.85 Aligned_cols=56 Identities=18% Similarity=0.249 Sum_probs=41.3
Q ss_pred CceEEEEeccCCCCCChhhH-HHHHHhcccccccccccCCceeeEeCCCceeeeEEEEEcCeEEEEEcCCcccccccCCh
Q 012900 365 GVNVTVYNGQLDVICSTKGT-EAWIEKLKWDGLQKFLSTERTPLFCGNDKITKGFKKSYKNLHFYWILGAGHFKNYCDTW 443 (454)
Q Consensus 365 ~irVLiy~Gd~D~i~n~~G~-~~~i~~L~W~g~~~f~~a~~~~w~~~~~~~~~G~~k~~~nLtf~~V~~AGHmvP~dqP~ 443 (454)
.++|||..|+.|.++|..+. ..+++.|. +...+.++.+|.+|||+++.++|+
T Consensus 292 ~~PtLii~G~~D~~~p~~~~~~~~~~~l~---------------------------~~ip~~~l~~i~~aGH~~~~E~Pe 344 (360)
T PLN02679 292 SLPILVLWGDQDPFTPLDGPVGKYFSSLP---------------------------SQLPNVTLYVLEGVGHCPHDDRPD 344 (360)
T ss_pred CCCEEEEEeCCCCCcCchhhHHHHHHhhh---------------------------ccCCceEEEEcCCCCCCccccCHH
Confidence 68999999999999987643 23334332 001256778899999999999999
Q ss_pred hhhh
Q 012900 444 SGKR 447 (454)
Q Consensus 444 ~~~~ 447 (454)
...+
T Consensus 345 ~~~~ 348 (360)
T PLN02679 345 LVHE 348 (360)
T ss_pred HHHH
Confidence 8754
No 80
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=92.03 E-value=0.52 Score=49.55 Aligned_cols=33 Identities=18% Similarity=0.107 Sum_probs=21.5
Q ss_pred HHHHHHHHhccccCCCCEEEEecccCcchhHHHH
Q 012900 143 TLLMELFNKNEILQKSPLFIVAESYGGKFAATLG 176 (454)
Q Consensus 143 ~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~lA 176 (454)
+++++-...|. -..+++.|+|+|.||+-+-.++
T Consensus 162 ~wv~~~i~~fg-gd~~~v~~~G~SaG~~~~~~~~ 194 (493)
T cd00312 162 KWVQDNIAAFG-GDPDSVTIFGESAGGASVSLLL 194 (493)
T ss_pred HHHHHHHHHhC-CCcceEEEEeecHHHHHhhhHh
Confidence 44444444443 2346899999999998665544
No 81
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=91.83 E-value=2.1 Score=41.96 Aligned_cols=37 Identities=22% Similarity=0.306 Sum_probs=29.1
Q ss_pred cccchHHHHHHHHHHHHHHHHhccccCCCCEEEEecccCc
Q 012900 130 FVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGG 169 (454)
Q Consensus 130 ~~~~~~~~A~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG 169 (454)
...+-+..|+|+..|+..+-. .++..+..|.|+|.||
T Consensus 98 ~~h~~~~ma~dv~~Fi~~v~~---~~~~~~~~l~GHsmGG 134 (315)
T KOG2382|consen 98 TVHNYEAMAEDVKLFIDGVGG---STRLDPVVLLGHSMGG 134 (315)
T ss_pred cccCHHHHHHHHHHHHHHccc---ccccCCceecccCcch
Confidence 345678889999888876543 2567899999999999
No 82
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=91.74 E-value=0.52 Score=45.43 Aligned_cols=110 Identities=21% Similarity=0.344 Sum_probs=67.0
Q ss_pred CEEEEEcCCCChhhhhhccccccCCCcccCCCCccchhccccceeecCCcccccCCccCC-----CCcccchHHHHHHHH
Q 012900 68 PIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLKKADLLFVDNPVGTGYSYVEDN-----SSFVKNDVEAANDLT 142 (454)
Q Consensus 68 PlilWlnGGPGcSS~~~G~f~E~GP~~~~~~~n~~SW~~~anvLfiDqPvGtGfSy~~~~-----~~~~~~~~~~A~d~~ 142 (454)
++++|+-|-||.-.. +--|.+ .+..+ .+....++=+.. .|||..... +....+.++.-+.-.
T Consensus 3 ~li~~IPGNPGlv~f-Y~~Fl~------~L~~~---l~~~~~i~~ish---~Gh~~~~~~~~~~~~~~~~sL~~QI~hk~ 69 (266)
T PF10230_consen 3 PLIVFIPGNPGLVEF-YEEFLS------ALYEK---LNPQFEILGISH---AGHSTSPSNSKFSPNGRLFSLQDQIEHKI 69 (266)
T ss_pred EEEEEECCCCChHHH-HHHHHH------HHHHh---CCCCCeeEEecC---CCCcCCcccccccCCCCccCHHHHHHHHH
Confidence 899999999999886 432210 01101 033334443442 255554432 234567888888899
Q ss_pred HHHHHHHHhccccCCCCEEEEecccCcchhHHHHHHHHHHHHcCCceeeeeeeEe
Q 012900 143 TLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVAL 197 (454)
Q Consensus 143 ~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkGi~i 197 (454)
+|++++....+ -.+.+++|.|+|=|...+ .+|+++.. ....+++++++
T Consensus 70 ~~i~~~~~~~~-~~~~~liLiGHSIGayi~----levl~r~~--~~~~~V~~~~l 117 (266)
T PF10230_consen 70 DFIKELIPQKN-KPNVKLILIGHSIGAYIA----LEVLKRLP--DLKFRVKKVIL 117 (266)
T ss_pred HHHHHHhhhhc-CCCCcEEEEeCcHHHHHH----HHHHHhcc--ccCCceeEEEE
Confidence 99999987654 246899999999986644 45554432 12345666655
No 83
>PRK03592 haloalkane dehalogenase; Provisional
Probab=91.57 E-value=0.19 Score=48.81 Aligned_cols=53 Identities=15% Similarity=0.100 Sum_probs=39.6
Q ss_pred CceEEEEeccCCCCCChhhHHHHHHhcccccccccccCCceeeEeCCCceeeeEEEEEcCeEEEEEcCCcccccccCChh
Q 012900 365 GVNVTVYNGQLDVICSTKGTEAWIEKLKWDGLQKFLSTERTPLFCGNDKITKGFKKSYKNLHFYWILGAGHFKNYCDTWS 444 (454)
Q Consensus 365 ~irVLiy~Gd~D~i~n~~G~~~~i~~L~W~g~~~f~~a~~~~w~~~~~~~~~G~~k~~~nLtf~~V~~AGHmvP~dqP~~ 444 (454)
.++|||.+|+.|.+++......++..+. .+.++.++.+|||+++.++|+.
T Consensus 228 ~~P~lii~G~~D~~~~~~~~~~~~~~~~------------------------------~~~~~~~i~~~gH~~~~e~p~~ 277 (295)
T PRK03592 228 DVPKLLINAEPGAILTTGAIRDWCRSWP------------------------------NQLEITVFGAGLHFAQEDSPEE 277 (295)
T ss_pred CCCeEEEeccCCcccCcHHHHHHHHHhh------------------------------hhcceeeccCcchhhhhcCHHH
Confidence 6899999999999996555555554322 1234566789999999999997
Q ss_pred hhh
Q 012900 445 GKR 447 (454)
Q Consensus 445 ~~~ 447 (454)
.-+
T Consensus 278 v~~ 280 (295)
T PRK03592 278 IGA 280 (295)
T ss_pred HHH
Confidence 644
No 84
>PRK10673 acyl-CoA esterase; Provisional
Probab=90.79 E-value=0.41 Score=44.94 Aligned_cols=52 Identities=13% Similarity=0.066 Sum_probs=38.8
Q ss_pred CceEEEEeccCCCCCChhhHHHHHHhcccccccccccCCceeeEeCCCceeeeEEEEEcCeEEEEEcCCcccccccCChh
Q 012900 365 GVNVTVYNGQLDVICSTKGTEAWIEKLKWDGLQKFLSTERTPLFCGNDKITKGFKKSYKNLHFYWILGAGHFKNYCDTWS 444 (454)
Q Consensus 365 ~irVLiy~Gd~D~i~n~~G~~~~i~~L~W~g~~~f~~a~~~~w~~~~~~~~~G~~k~~~nLtf~~V~~AGHmvP~dqP~~ 444 (454)
..+||+..|+.|..++....+.+.+.+ .+.+++++.++||+.+.++|+.
T Consensus 195 ~~P~l~i~G~~D~~~~~~~~~~~~~~~-------------------------------~~~~~~~~~~~gH~~~~~~p~~ 243 (255)
T PRK10673 195 PHPALFIRGGNSPYVTEAYRDDLLAQF-------------------------------PQARAHVIAGAGHWVHAEKPDA 243 (255)
T ss_pred CCCeEEEECCCCCCCCHHHHHHHHHhC-------------------------------CCcEEEEeCCCCCeeeccCHHH
Confidence 479999999999988754444333322 2456788999999999999986
Q ss_pred hhh
Q 012900 445 GKR 447 (454)
Q Consensus 445 ~~~ 447 (454)
..+
T Consensus 244 ~~~ 246 (255)
T PRK10673 244 VLR 246 (255)
T ss_pred HHH
Confidence 543
No 85
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=90.67 E-value=0.58 Score=51.86 Aligned_cols=123 Identities=25% Similarity=0.353 Sum_probs=67.6
Q ss_pred eeEEEEecCCceEEEEEEEcCCCCCCCCCCCCEEEEEcCCCChhhhhhccccccCCCcccCCCCccchhc-cccceeecC
Q 012900 37 EWGYVEVRPKAHMFWWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLK-KADLLFVDN 115 (454)
Q Consensus 37 ~sGyv~v~~~~~lfywf~es~~~~~~p~~~~PlilWlnGGPGcSS~~~G~f~E~GP~~~~~~~n~~SW~~-~anvLfiDq 115 (454)
+.+-+.+ ++....+++...++ -++.+.-||+++..|||+.=+. .+.|. +..+.+.+.+ -+=++-||
T Consensus 499 ~~~~i~~-~~~~~~~~~~lP~~--~~~~~kyPllv~~yGGP~sq~v-~~~~~--------~~~~~~~~s~~g~~v~~vd- 565 (755)
T KOG2100|consen 499 EFGKIEI-DGITANAILILPPN--FDPSKKYPLLVVVYGGPGSQSV-TSKFS--------VDWNEVVVSSRGFAVLQVD- 565 (755)
T ss_pred eeEEEEe-ccEEEEEEEecCCC--CCCCCCCCEEEEecCCCCccee-eeeEE--------ecHHHHhhccCCeEEEEEc-
Confidence 4455555 34466677766542 3566667999999999993222 22111 2223332222 24467788
Q ss_pred CcccccCCccCCCCcc--cchHHHHHHHHHHHHHHHHhccccCCCCEEEEecccCcchhHH
Q 012900 116 PVGTGYSYVEDNSSFV--KNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAAT 174 (454)
Q Consensus 116 PvGtGfSy~~~~~~~~--~~~~~~A~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~ 174 (454)
+-|+|+.--+-..... -.+.+ .+|.....+.+.+.+ ..-...+.|+|-||||...-.
T Consensus 566 ~RGs~~~G~~~~~~~~~~lG~~e-v~D~~~~~~~~~~~~-~iD~~ri~i~GwSyGGy~t~~ 624 (755)
T KOG2100|consen 566 GRGSGGYGWDFRSALPRNLGDVE-VKDQIEAVKKVLKLP-FIDRSRVAIWGWSYGGYLTLK 624 (755)
T ss_pred CCCcCCcchhHHHHhhhhcCCcc-hHHHHHHHHHHHhcc-cccHHHeEEeccChHHHHHHH
Confidence 6688865322000001 11122 344556666666554 333567999999999975443
No 86
>PRK11071 esterase YqiA; Provisional
Probab=90.19 E-value=0.42 Score=43.51 Aligned_cols=76 Identities=22% Similarity=0.309 Sum_probs=47.3
Q ss_pred CEEEEEcCCCChhhhhhc-cccccCCCcccCCCCccchhc---cccceeecCCcccccCCccCCCCcccchHHHHHHHHH
Q 012900 68 PIILWLQGGPGASGVGIG-NFEEVGPFDTYLKPRNSTWLK---KADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTT 143 (454)
Q Consensus 68 PlilWlnGGPGcSS~~~G-~f~E~GP~~~~~~~n~~SW~~---~anvLfiDqPvGtGfSy~~~~~~~~~~~~~~A~d~~~ 143 (454)
|.||+|+|-+|++..+-. .+. .-+.+ ..+++.+|.| |.| ++.++
T Consensus 2 p~illlHGf~ss~~~~~~~~~~-------------~~l~~~~~~~~v~~~dl~-g~~--------------~~~~~---- 49 (190)
T PRK11071 2 STLLYLHGFNSSPRSAKATLLK-------------NWLAQHHPDIEMIVPQLP-PYP--------------ADAAE---- 49 (190)
T ss_pred CeEEEECCCCCCcchHHHHHHH-------------HHHHHhCCCCeEEeCCCC-CCH--------------HHHHH----
Confidence 789999998887765211 000 00111 3467888888 321 23444
Q ss_pred HHHHHHHhccccCCCCEEEEecccCcchhHHHHHH
Q 012900 144 LLMELFNKNEILQKSPLFIVAESYGGKFAATLGLA 178 (454)
Q Consensus 144 fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~lA~~ 178 (454)
++.++.+.. ..++++|.|.|.||.++-.+|.+
T Consensus 50 ~l~~l~~~~---~~~~~~lvG~S~Gg~~a~~~a~~ 81 (190)
T PRK11071 50 LLESLVLEH---GGDPLGLVGSSLGGYYATWLSQC 81 (190)
T ss_pred HHHHHHHHc---CCCCeEEEEECHHHHHHHHHHHH
Confidence 444454433 34689999999999999888754
No 87
>PLN02965 Probable pheophorbidase
Probab=90.18 E-value=0.47 Score=44.95 Aligned_cols=52 Identities=10% Similarity=0.018 Sum_probs=40.1
Q ss_pred cCceEEEEeccCCCCCChhhHHHHHHhcccccccccccCCceeeEeCCCceeeeEEEEEcCeEEEEEcCCcccccccCCh
Q 012900 364 KGVNVTVYNGQLDVICSTKGTEAWIEKLKWDGLQKFLSTERTPLFCGNDKITKGFKKSYKNLHFYWILGAGHFKNYCDTW 443 (454)
Q Consensus 364 ~~irVLiy~Gd~D~i~n~~G~~~~i~~L~W~g~~~f~~a~~~~w~~~~~~~~~G~~k~~~nLtf~~V~~AGHmvP~dqP~ 443 (454)
-.+++|+..|..|.++|....+...+.+. +-+++++.+|||++..++|+
T Consensus 192 i~vP~lvi~g~~D~~~~~~~~~~~~~~~~-------------------------------~a~~~~i~~~GH~~~~e~p~ 240 (255)
T PLN02965 192 EKVPRVYIKTAKDNLFDPVRQDVMVENWP-------------------------------PAQTYVLEDSDHSAFFSVPT 240 (255)
T ss_pred CCCCEEEEEcCCCCCCCHHHHHHHHHhCC-------------------------------cceEEEecCCCCchhhcCHH
Confidence 36999999999999998865554443333 22456788999999999999
Q ss_pred hhh
Q 012900 444 SGK 446 (454)
Q Consensus 444 ~~~ 446 (454)
..-
T Consensus 241 ~v~ 243 (255)
T PLN02965 241 TLF 243 (255)
T ss_pred HHH
Confidence 764
No 88
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=90.08 E-value=1.4 Score=41.23 Aligned_cols=39 Identities=23% Similarity=0.267 Sum_probs=28.2
Q ss_pred ccCCCCEEEEecccCcchhHHHHHHHHHHHHcCCceeeeeeeEecccC
Q 012900 154 ILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSW 201 (454)
Q Consensus 154 ~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkGi~iGNg~ 201 (454)
..-.+.+|++|.|=||.....++..--+ -+.++++-.|.
T Consensus 93 ~iD~~RVyv~G~S~Gg~ma~~la~~~pd---------~faa~a~~sG~ 131 (220)
T PF10503_consen 93 NIDPSRVYVTGLSNGGMMANVLACAYPD---------LFAAVAVVSGV 131 (220)
T ss_pred ccCCCceeeEEECHHHHHHHHHHHhCCc---------cceEEEeeccc
Confidence 4556789999999999888777754322 46777775554
No 89
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=89.94 E-value=0.58 Score=46.26 Aligned_cols=51 Identities=18% Similarity=0.156 Sum_probs=41.7
Q ss_pred CceEEEEeccCCCCCChhhHHHHHHhcccccccccccCCceeeEeCCCceeeeEEEEEcCeEEEEEcCCcccccccCChh
Q 012900 365 GVNVTVYNGQLDVICSTKGTEAWIEKLKWDGLQKFLSTERTPLFCGNDKITKGFKKSYKNLHFYWILGAGHFKNYCDTWS 444 (454)
Q Consensus 365 ~irVLiy~Gd~D~i~n~~G~~~~i~~L~W~g~~~f~~a~~~~w~~~~~~~~~G~~k~~~nLtf~~V~~AGHmvP~dqP~~ 444 (454)
.++|||.+|+.|.+||....+++.+.+..+ +-+++++.++||++..++|+.
T Consensus 251 ~~PvLii~G~~D~ivp~~~~~~l~~~i~~~-----------------------------~~~l~~~~~a~H~~~~e~pd~ 301 (330)
T PLN02298 251 SIPFIVLHGSADVVTDPDVSRALYEEAKSE-----------------------------DKTIKIYDGMMHSLLFGEPDE 301 (330)
T ss_pred CCCEEEEecCCCCCCCHHHHHHHHHHhccC-----------------------------CceEEEcCCcEeeeecCCCHH
Confidence 699999999999999998888877776521 234567889999999999964
No 90
>PRK00870 haloalkane dehalogenase; Provisional
Probab=89.84 E-value=0.53 Score=45.83 Aligned_cols=59 Identities=17% Similarity=0.013 Sum_probs=40.5
Q ss_pred HHhhcCceEEEEeccCCCCCChhhHHHHHHhcccccccccccCCceeeEeCCCceeeeEEEEEcCeEEEEEcCCcccccc
Q 012900 360 ELLAKGVNVTVYNGQLDVICSTKGTEAWIEKLKWDGLQKFLSTERTPLFCGNDKITKGFKKSYKNLHFYWILGAGHFKNY 439 (454)
Q Consensus 360 ~LL~~~irVLiy~Gd~D~i~n~~G~~~~i~~L~W~g~~~f~~a~~~~w~~~~~~~~~G~~k~~~nLtf~~V~~AGHmvP~ 439 (454)
.+.+-.++|||..|..|.+++... +.+.+.+. + ..+..++++.++||+++.
T Consensus 234 ~l~~i~~P~lii~G~~D~~~~~~~-~~~~~~~~-----------------~-----------~~~~~~~~i~~~gH~~~~ 284 (302)
T PRK00870 234 VLERWDKPFLTAFSDSDPITGGGD-AILQKRIP-----------------G-----------AAGQPHPTIKGAGHFLQE 284 (302)
T ss_pred hhhcCCCceEEEecCCCCcccCch-HHHHhhcc-----------------c-----------ccccceeeecCCCccchh
Confidence 344557999999999999998543 32222222 0 012445678999999999
Q ss_pred cCChhhhh
Q 012900 440 CDTWSGKR 447 (454)
Q Consensus 440 dqP~~~~~ 447 (454)
++|+...+
T Consensus 285 e~p~~~~~ 292 (302)
T PRK00870 285 DSGEELAE 292 (302)
T ss_pred hChHHHHH
Confidence 99987653
No 91
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=89.77 E-value=0.34 Score=48.36 Aligned_cols=53 Identities=15% Similarity=-0.066 Sum_probs=40.7
Q ss_pred CceEEEEeccCCCCCChhhHHHHHHhcccccccccccCCceeeEeCCCceeeeEEEEEcCeEEEEEc-CCcccccccCCh
Q 012900 365 GVNVTVYNGQLDVICSTKGTEAWIEKLKWDGLQKFLSTERTPLFCGNDKITKGFKKSYKNLHFYWIL-GAGHFKNYCDTW 443 (454)
Q Consensus 365 ~irVLiy~Gd~D~i~n~~G~~~~i~~L~W~g~~~f~~a~~~~w~~~~~~~~~G~~k~~~nLtf~~V~-~AGHmvP~dqP~ 443 (454)
.+++||+.|+.|.++|....+...+.+. .+-.+++|. +|||+++.++|+
T Consensus 277 ~~PtLvi~G~~D~~~p~~~~~~~~~~i~------------------------------p~a~l~~i~~~aGH~~~lE~Pe 326 (343)
T PRK08775 277 RVPTVVVAVEGDRLVPLADLVELAEGLG------------------------------PRGSLRVLRSPYGHDAFLKETD 326 (343)
T ss_pred CCCeEEEEeCCCEeeCHHHHHHHHHHcC------------------------------CCCeEEEEeCCccHHHHhcCHH
Confidence 5799999999999999877766665553 023456687 499999999999
Q ss_pred hhhh
Q 012900 444 SGKR 447 (454)
Q Consensus 444 ~~~~ 447 (454)
..-+
T Consensus 327 ~~~~ 330 (343)
T PRK08775 327 RIDA 330 (343)
T ss_pred HHHH
Confidence 7543
No 92
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=89.73 E-value=3.2 Score=41.46 Aligned_cols=132 Identities=14% Similarity=0.142 Sum_probs=71.4
Q ss_pred CceEEEEEEEcCCCCCCCCCCCCEEEEEcCCCChhhhhhccccc---cCCCcccCCCCccchhccccceeecCCcc--cc
Q 012900 46 KAHMFWWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEE---VGPFDTYLKPRNSTWLKKADLLFVDNPVG--TG 120 (454)
Q Consensus 46 ~~~lfywf~es~~~~~~p~~~~PlilWlnGGPGcSS~~~G~f~E---~GP~~~~~~~n~~SW~~~anvLfiDqPvG--tG 120 (454)
+.+++|.-+... ++.. .|.||.++|=+|.+-. .. ..+ -|=+.....+...--.+...||-+|.| | .|
T Consensus 15 ~~~~~y~~~g~~----~~~~-~~~vll~Hg~~~~~~~-~~-~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~D~~-G~~~g 86 (351)
T TIGR01392 15 DVRVAYETYGTL----NAER-SNAVLVCHALTGDAHV-AG-YHDDGDPGWWDDLIGPGRAIDTDRYFVVCSNVL-GGCYG 86 (351)
T ss_pred CceEEEEecccc----CCCC-CCEEEEcCCcCcchhh-cc-cCCCCCCCchhhccCCCCCcCCCceEEEEecCC-CCCCC
Confidence 357887666431 1112 3889999987775533 10 000 000000000000111345689999999 6 45
Q ss_pred cCCccC----C-----CCcccchHHHHHHHHHHHHHHHHhccccCCCC-EEEEecccCcchhHHHHHHHHHHHHcCCcee
Q 012900 121 YSYVED----N-----SSFVKNDVEAANDLTTLLMELFNKNEILQKSP-LFIVAESYGGKFAATLGLAAVKAIEAGKLKL 190 (454)
Q Consensus 121 fSy~~~----~-----~~~~~~~~~~A~d~~~fL~~F~~~fP~~~~~~-~yi~GESYgG~yvP~lA~~i~~~~~~~~~~i 190 (454)
-|-..+ + +....+.++.++++.++++.+ .-.+ ++|.|+|+||..+-.+|.+--+
T Consensus 87 ~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-------~~~~~~~l~G~S~Gg~ia~~~a~~~p~--------- 150 (351)
T TIGR01392 87 STGPSSINPGGRPYGSDFPLITIRDDVKAQKLLLDHL-------GIEQIAAVVGGSMGGMQALEWAIDYPE--------- 150 (351)
T ss_pred CCCCCCCCCCCCcCCCCCCCCcHHHHHHHHHHHHHHc-------CCCCceEEEEECHHHHHHHHHHHHChH---------
Confidence 442111 0 011345667777777776542 2245 9999999999888877754221
Q ss_pred eeeeeEecccC
Q 012900 191 KLGGVALGDSW 201 (454)
Q Consensus 191 nLkGi~iGNg~ 201 (454)
.++++++-++.
T Consensus 151 ~v~~lvl~~~~ 161 (351)
T TIGR01392 151 RVRAIVVLATS 161 (351)
T ss_pred hhheEEEEccC
Confidence 47888886653
No 93
>PLN02454 triacylglycerol lipase
Probab=88.94 E-value=1.1 Score=45.67 Aligned_cols=70 Identities=13% Similarity=0.233 Sum_probs=52.5
Q ss_pred chHHHHHHHHHHHHHHHHhccccCCCCEEEEecccCcchhHHHHHHHHHHHHcCCceeeeeeeEecccCCCc
Q 012900 133 NDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWISP 204 (454)
Q Consensus 133 ~~~~~A~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkGi~iGNg~~~p 204 (454)
+...+.+++...+++..+++|..+ ..++|+|+|-||-.+-..|..|.+.... ...++++.+..|.|-+..
T Consensus 204 ~~~S~r~qvl~~V~~l~~~Yp~~~-~sI~vTGHSLGGALAtLaA~di~~~g~~-~~~~~V~~~TFGsPRVGN 273 (414)
T PLN02454 204 TKLSARSQLLAKIKELLERYKDEK-LSIVLTGHSLGASLATLAAFDIVENGVS-GADIPVTAIVFGSPQVGN 273 (414)
T ss_pred hhHHHHHHHHHHHHHHHHhCCCCC-ceEEEEecCHHHHHHHHHHHHHHHhccc-ccCCceEEEEeCCCcccC
Confidence 345788899999999999888753 3699999999999988888887653111 123457778888887754
No 94
>PRK11460 putative hydrolase; Provisional
Probab=88.40 E-value=2.2 Score=40.05 Aligned_cols=36 Identities=11% Similarity=-0.033 Sum_probs=23.6
Q ss_pred HHHHHHHHHHhccccCCCCEEEEecccCcchhHHHHH
Q 012900 141 LTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGL 177 (454)
Q Consensus 141 ~~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~lA~ 177 (454)
+.++++.+.++. ....++++|.|.|.||..+-.++.
T Consensus 87 l~~~i~~~~~~~-~~~~~~i~l~GfS~Gg~~al~~a~ 122 (232)
T PRK11460 87 FIETVRYWQQQS-GVGASATALIGFSQGAIMALEAVK 122 (232)
T ss_pred HHHHHHHHHHhc-CCChhhEEEEEECHHHHHHHHHHH
Confidence 444444333332 344568999999999998876654
No 95
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=88.31 E-value=0.91 Score=43.50 Aligned_cols=51 Identities=16% Similarity=0.023 Sum_probs=37.5
Q ss_pred CceEEEEeccCCCCCChhhHHHHHHhcccccccccccCCceeeEeCCCceeeeEEEEEcCeEEEEEcCCcccccccCChh
Q 012900 365 GVNVTVYNGQLDVICSTKGTEAWIEKLKWDGLQKFLSTERTPLFCGNDKITKGFKKSYKNLHFYWILGAGHFKNYCDTWS 444 (454)
Q Consensus 365 ~irVLiy~Gd~D~i~n~~G~~~~i~~L~W~g~~~f~~a~~~~w~~~~~~~~~G~~k~~~nLtf~~V~~AGHmvP~dqP~~ 444 (454)
.++|||..|+.|-++|....++..+.+. +.+++++. +|||++.++|+.
T Consensus 207 ~~P~lii~G~~D~~v~~~~~~~l~~~~~-------------------------------~~~~~~i~-~gH~~~~e~p~~ 254 (276)
T TIGR02240 207 QQPTLVLAGDDDPIIPLINMRLLAWRIP-------------------------------NAELHIID-DGHLFLITRAEA 254 (276)
T ss_pred CCCEEEEEeCCCCcCCHHHHHHHHHhCC-------------------------------CCEEEEEc-CCCchhhccHHH
Confidence 5899999999999998776655443332 23445565 599999999987
Q ss_pred hhh
Q 012900 445 GKR 447 (454)
Q Consensus 445 ~~~ 447 (454)
..+
T Consensus 255 ~~~ 257 (276)
T TIGR02240 255 VAP 257 (276)
T ss_pred HHH
Confidence 654
No 96
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=88.31 E-value=0.81 Score=46.89 Aligned_cols=52 Identities=17% Similarity=0.136 Sum_probs=36.5
Q ss_pred CceEEEEeccCCCCCChhhHHHHHHhcccccccccccCCceeeEeCCCceeeeEEEEEcCeEEEEEcCCcccccccCChh
Q 012900 365 GVNVTVYNGQLDVICSTKGTEAWIEKLKWDGLQKFLSTERTPLFCGNDKITKGFKKSYKNLHFYWILGAGHFKNYCDTWS 444 (454)
Q Consensus 365 ~irVLiy~Gd~D~i~n~~G~~~~i~~L~W~g~~~f~~a~~~~w~~~~~~~~~G~~k~~~nLtf~~V~~AGHmvP~dqP~~ 444 (454)
.++||+..|+.|.+++ ...+++.+.++ .+-.+++|.+|||+++.|+|+.
T Consensus 325 ~vP~liI~G~~D~i~~-~~~~~~~~~~~------------------------------~~~~~~~i~~aGH~~~~E~P~~ 373 (402)
T PLN02894 325 KVPTTFIYGRHDWMNY-EGAVEARKRMK------------------------------VPCEIIRVPQGGHFVFLDNPSG 373 (402)
T ss_pred CCCEEEEEeCCCCCCc-HHHHHHHHHcC------------------------------CCCcEEEeCCCCCeeeccCHHH
Confidence 6899999999998876 33333322221 0123677999999999999987
Q ss_pred hhh
Q 012900 445 GKR 447 (454)
Q Consensus 445 ~~~ 447 (454)
..+
T Consensus 374 f~~ 376 (402)
T PLN02894 374 FHS 376 (402)
T ss_pred HHH
Confidence 543
No 97
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=88.30 E-value=4.1 Score=42.70 Aligned_cols=52 Identities=15% Similarity=0.229 Sum_probs=41.6
Q ss_pred HHHHHHHHhccccCCCCEEEEecccCcchhHHHHHHHHHHHHcCCceeeeeeeEecccCCCchhh
Q 012900 143 TLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWISPEDF 207 (454)
Q Consensus 143 ~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkGi~iGNg~~~p~~~ 207 (454)
+.++.||.+-|+| -|..|-|=||+=.-..|++--+ .+.||+.|.|-++...+
T Consensus 104 ~l~~~~Yg~~p~~----sY~~GcS~GGRqgl~~AQryP~---------dfDGIlAgaPA~~~~~~ 155 (474)
T PF07519_consen 104 ALIEAFYGKAPKY----SYFSGCSTGGRQGLMAAQRYPE---------DFDGILAGAPAINWTHL 155 (474)
T ss_pred HHHHHHhCCCCCc----eEEEEeCCCcchHHHHHHhChh---------hcCeEEeCCchHHHHHH
Confidence 5567788777764 7999999999999888877644 58999999998876543
No 98
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=87.68 E-value=0.84 Score=46.43 Aligned_cols=51 Identities=18% Similarity=0.020 Sum_probs=38.5
Q ss_pred CceEEEEeccCCCCCChhhHHHHHHhcccccccccccCCceeeEeCCCceeeeEEEEEcCeEEEEEcCCcccccccCChh
Q 012900 365 GVNVTVYNGQLDVICSTKGTEAWIEKLKWDGLQKFLSTERTPLFCGNDKITKGFKKSYKNLHFYWILGAGHFKNYCDTWS 444 (454)
Q Consensus 365 ~irVLiy~Gd~D~i~n~~G~~~~i~~L~W~g~~~f~~a~~~~w~~~~~~~~~G~~k~~~nLtf~~V~~AGHmvP~dqP~~ 444 (454)
.++|||..|+.|-+++....+.+.+.+ +.++++|.+|||+++.|+|+.
T Consensus 325 ~vPvLiI~G~~D~~v~~~~~~~~a~~~--------------------------------~a~l~vIp~aGH~~~~E~Pe~ 372 (383)
T PLN03084 325 KTPITVCWGLRDRWLNYDGVEDFCKSS--------------------------------QHKLIELPMAGHHVQEDCGEE 372 (383)
T ss_pred CCCEEEEeeCCCCCcCHHHHHHHHHhc--------------------------------CCeEEEECCCCCCcchhCHHH
Confidence 589999999999988766554433311 234577999999999999998
Q ss_pred hhh
Q 012900 445 GKR 447 (454)
Q Consensus 445 ~~~ 447 (454)
.-+
T Consensus 373 v~~ 375 (383)
T PLN03084 373 LGG 375 (383)
T ss_pred HHH
Confidence 643
No 99
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=86.38 E-value=1.3 Score=44.17 Aligned_cols=51 Identities=12% Similarity=0.027 Sum_probs=40.8
Q ss_pred CceEEEEeccCCCCCChhhHHHHHHhcccccccccccCCceeeEeCCCceeeeEEEEEcCeEEEEEcCCcccccccCChh
Q 012900 365 GVNVTVYNGQLDVICSTKGTEAWIEKLKWDGLQKFLSTERTPLFCGNDKITKGFKKSYKNLHFYWILGAGHFKNYCDTWS 444 (454)
Q Consensus 365 ~irVLiy~Gd~D~i~n~~G~~~~i~~L~W~g~~~f~~a~~~~w~~~~~~~~~G~~k~~~nLtf~~V~~AGHmvP~dqP~~ 444 (454)
.++|||.+|..|.++|....+.+.+++.- .+-++.++.++||+...++|+.
T Consensus 279 ~~P~Lii~G~~D~vv~~~~~~~l~~~~~~-----------------------------~~~~l~~i~~~gH~l~~e~p~~ 329 (349)
T PLN02385 279 SLPLLILHGEADKVTDPSVSKFLYEKASS-----------------------------SDKKLKLYEDAYHSILEGEPDE 329 (349)
T ss_pred CCCEEEEEeCCCCccChHHHHHHHHHcCC-----------------------------CCceEEEeCCCeeecccCCChh
Confidence 69999999999999998777666665541 1235667899999999999986
No 100
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=85.67 E-value=0.66 Score=42.92 Aligned_cols=58 Identities=28% Similarity=0.342 Sum_probs=35.3
Q ss_pred HHHHHHHHHHHHHHHhccccCCCCEEEEecccCcchhHHHHHHHHHHHHcCCceeeeeeeEecccCCCc
Q 012900 136 EAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWISP 204 (454)
Q Consensus 136 ~~A~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkGi~iGNg~~~p 204 (454)
++++.+.+++....+.. ...++++|.|-|=||..+-.++.+- +-.+.|++.-+|++-+
T Consensus 85 ~s~~~l~~li~~~~~~~--i~~~ri~l~GFSQGa~~al~~~l~~---------p~~~~gvv~lsG~~~~ 142 (216)
T PF02230_consen 85 ESAERLDELIDEEVAYG--IDPSRIFLGGFSQGAAMALYLALRY---------PEPLAGVVALSGYLPP 142 (216)
T ss_dssp HHHHHHHHHHHHHHHTT----GGGEEEEEETHHHHHHHHHHHCT---------SSTSSEEEEES---TT
T ss_pred HHHHHHHHHHHHHHHcC--CChhheehhhhhhHHHHHHHHHHHc---------CcCcCEEEEeeccccc
Confidence 34444555555444322 4567899999999999887776432 2268899988888744
No 101
>COG4099 Predicted peptidase [General function prediction only]
Probab=85.64 E-value=10 Score=36.86 Aligned_cols=112 Identities=25% Similarity=0.412 Sum_probs=58.8
Q ss_pred CceEEEEEEEcCCCCCCCCCCC-CEEEEEcCCC-Chhh------hhhccccccCCCcccCCCCccchhccccceeecCCc
Q 012900 46 KAHMFWWLYKSPYRIENPSKPW-PIILWLQGGP-GASG------VGIGNFEEVGPFDTYLKPRNSTWLKKADLLFVDNPV 117 (454)
Q Consensus 46 ~~~lfywf~es~~~~~~p~~~~-PlilWlnGGP-GcSS------~~~G~f~E~GP~~~~~~~n~~SW~~~anvLfiDqPv 117 (454)
+.++-|-+|..+. -+|.++. ||+|||+|+- |.+- .+.|...+.||=.- -||=.|=
T Consensus 171 gneLkYrly~Pkd--y~pdkky~PLvlfLHgagq~g~dn~~~l~sg~gaiawa~pedq---------------cfVlAPQ 233 (387)
T COG4099 171 GNELKYRLYTPKD--YAPDKKYYPLVLFLHGAGQGGSDNDKVLSSGIGAIAWAGPEDQ---------------CFVLAPQ 233 (387)
T ss_pred CceeeEEEecccc--cCCCCccccEEEEEecCCCCCchhhhhhhcCccceeeecccCc---------------eEEEccc
Confidence 4678888887543 3566666 9999999853 3321 12455555555210 2222231
Q ss_pred ccccCCccCCCCcccchHHHHHHHHHHHHHHHHhccccCCCCEEEEecccCcchhHHHHHHH
Q 012900 118 GTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAA 179 (454)
Q Consensus 118 GtGfSy~~~~~~~~~~~~~~A~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~lA~~i 179 (454)
|+-.-+.+. ...+.--......+.+=+..++..-.+.+|++|-|-||.-.=+++.+-
T Consensus 234 ---y~~if~d~e--~~t~~~l~~~idli~~vlas~ynID~sRIYviGlSrG~~gt~al~~kf 290 (387)
T COG4099 234 ---YNPIFADSE--EKTLLYLIEKIDLILEVLASTYNIDRSRIYVIGLSRGGFGTWALAEKF 290 (387)
T ss_pred ---ccccccccc--cccchhHHHHHHHHHHHHhhccCcccceEEEEeecCcchhhHHHHHhC
Confidence 221101000 011111111223333333356666688999999999998766665443
No 102
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=85.12 E-value=1.6 Score=43.62 Aligned_cols=56 Identities=13% Similarity=0.006 Sum_probs=41.8
Q ss_pred CceEEEEeccCCCCCChhhHHHHHHhcccccccccccCCceeeEeCCCceeeeEEEEEcCeEEEEEc-CCcccccccCCh
Q 012900 365 GVNVTVYNGQLDVICSTKGTEAWIEKLKWDGLQKFLSTERTPLFCGNDKITKGFKKSYKNLHFYWIL-GAGHFKNYCDTW 443 (454)
Q Consensus 365 ~irVLiy~Gd~D~i~n~~G~~~~i~~L~W~g~~~f~~a~~~~w~~~~~~~~~G~~k~~~nLtf~~V~-~AGHmvP~dqP~ 443 (454)
.++||++.|+.|.++|....+...+.+. +. . -..+|+.|. +|||+++.++|+
T Consensus 288 ~~P~Lvi~G~~D~~~p~~~~~~~a~~i~-----------------~~-~---------~~v~~~~i~~~~GH~~~le~p~ 340 (351)
T TIGR01392 288 KAPFLVVSITSDWLFPPAESRELAKALP-----------------AA-G---------LRVTYVEIESPYGHDAFLVETD 340 (351)
T ss_pred CCCEEEEEeCCccccCHHHHHHHHHHHh-----------------hc-C---------CceEEEEeCCCCCcchhhcCHH
Confidence 5899999999999999888777666664 00 0 013455564 899999999998
Q ss_pred hhhh
Q 012900 444 SGKR 447 (454)
Q Consensus 444 ~~~~ 447 (454)
...+
T Consensus 341 ~~~~ 344 (351)
T TIGR01392 341 QVEE 344 (351)
T ss_pred HHHH
Confidence 7643
No 103
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=84.63 E-value=3.7 Score=45.45 Aligned_cols=98 Identities=18% Similarity=0.301 Sum_probs=60.3
Q ss_pred CCCCEEEEEcCCCChhhhhhccccccCCCcccCCCCccchh-ccccceeecCCcccccCCcc-C--------CCC--c--
Q 012900 65 KPWPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWL-KKADLLFVDNPVGTGYSYVE-D--------NSS--F-- 130 (454)
Q Consensus 65 ~~~PlilWlnGGPGcSS~~~G~f~E~GP~~~~~~~n~~SW~-~~anvLfiDqPvGtGfSy~~-~--------~~~--~-- 130 (454)
...|+||+++|=.|....+..+.. .+. +-..++-+|.| |.|-|... + ... +
T Consensus 447 ~g~P~VVllHG~~g~~~~~~~lA~--------------~La~~Gy~VIaiDlp-GHG~S~~~~~~~~~~a~~~~~~~y~N 511 (792)
T TIGR03502 447 DGWPVVIYQHGITGAKENALAFAG--------------TLAAAGVATIAIDHP-LHGARSFDANASGVNATNANVLAYMN 511 (792)
T ss_pred CCCcEEEEeCCCCCCHHHHHHHHH--------------HHHhCCcEEEEeCCC-CCCccccccccccccccccCccceec
Confidence 345899999986666554221111 122 23457788887 77777222 1 110 1
Q ss_pred -------ccchHHHHHHHHHHHHHHH------Hh---ccccCCCCEEEEecccCcchhHHHHH
Q 012900 131 -------VKNDVEAANDLTTLLMELF------NK---NEILQKSPLFIVAESYGGKFAATLGL 177 (454)
Q Consensus 131 -------~~~~~~~A~d~~~fL~~F~------~~---fP~~~~~~~yi~GESYgG~yvP~lA~ 177 (454)
..+-.+...|++......- .. +..+...++++.|+|.||..+..++.
T Consensus 512 l~~l~~aRDn~rQ~v~Dll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~ 574 (792)
T TIGR03502 512 LASLLVARDNLRQSILDLLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIA 574 (792)
T ss_pred cccccccccCHHHHHHHHHHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHH
Confidence 1256888888876655442 11 23355689999999999999988874
No 104
>COG0400 Predicted esterase [General function prediction only]
Probab=84.61 E-value=11 Score=34.90 Aligned_cols=97 Identities=19% Similarity=0.156 Sum_probs=60.0
Q ss_pred CcccccCCccCCCCcccchHHHHHHHHHHHHHHHHhccccCCCCEEEEecccCcchhHHHHHHHHHHHHcCCceeeeeee
Q 012900 116 PVGTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGV 195 (454)
Q Consensus 116 PvGtGfSy~~~~~~~~~~~~~~A~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkGi 195 (454)
+....|+..+............+..+.+||....+.+. ...+++++.|-|=|+.++..+..+- +-.++|+
T Consensus 58 g~~~~f~~~~~~~~d~edl~~~~~~~~~~l~~~~~~~g-i~~~~ii~~GfSqGA~ial~~~l~~---------~~~~~~a 127 (207)
T COG0400 58 GGPRFFRRYDEGSFDQEDLDLETEKLAEFLEELAEEYG-IDSSRIILIGFSQGANIALSLGLTL---------PGLFAGA 127 (207)
T ss_pred CcccceeecCCCccchhhHHHHHHHHHHHHHHHHHHhC-CChhheEEEecChHHHHHHHHHHhC---------chhhccc
Confidence 43445555544433334455566677788888777653 3457899999999998887766432 2268888
Q ss_pred EecccCCCchhh---hhhcccccccCCCCC
Q 012900 196 ALGDSWISPEDF---VFSWGPLLKDMSRLD 222 (454)
Q Consensus 196 ~iGNg~~~p~~~---~~~~~~~~~~~glid 222 (454)
++=.|..-+... ...-.+.+..+|--|
T Consensus 128 il~~g~~~~~~~~~~~~~~~pill~hG~~D 157 (207)
T COG0400 128 ILFSGMLPLEPELLPDLAGTPILLSHGTED 157 (207)
T ss_pred hhcCCcCCCCCccccccCCCeEEEeccCcC
Confidence 888877754421 223345555555444
No 105
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=84.03 E-value=5.7 Score=40.33 Aligned_cols=134 Identities=21% Similarity=0.296 Sum_probs=73.8
Q ss_pred EEEEecCCceE-EEEEEEcCCCC-CCCCCCCCEEEEEcCCCChhhhh-----hccccccCCCcccCCCCccchhccccce
Q 012900 39 GYVEVRPKAHM-FWWLYKSPYRI-ENPSKPWPIILWLQGGPGASGVG-----IGNFEEVGPFDTYLKPRNSTWLKKADLL 111 (454)
Q Consensus 39 Gyv~v~~~~~l-fywf~es~~~~-~~p~~~~PlilWlnGGPGcSS~~-----~G~f~E~GP~~~~~~~n~~SW~~~anvL 111 (454)
=+|...+++.. +=|+-....+. .+. .++|++|.|.|=+|.|.-. ....++.| |+. +
T Consensus 96 eii~~~DGG~~~lDW~~~~~~~~~~~~-~~~P~vvilpGltg~S~~~YVr~lv~~a~~~G-~r~---------------V 158 (409)
T KOG1838|consen 96 EIIKTSDGGTVTLDWVENPDSRCRTDD-GTDPIVVILPGLTGGSHESYVRHLVHEAQRKG-YRV---------------V 158 (409)
T ss_pred EEEEeCCCCEEEEeeccCcccccCCCC-CCCcEEEEecCCCCCChhHHHHHHHHHHHhCC-cEE---------------E
Confidence 46666655443 33443321110 112 3459999999999888642 22333444 332 1
Q ss_pred eecCCcccccCCccCCCCcccchHHHHHHHHHHHHHHHHhccccCCCCEEEEecccCcchhHHHHHHHHHHHHcCCceee
Q 012900 112 FVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLK 191 (454)
Q Consensus 112 fiDqPvGtGfSy~~~~~~~~~~~~~~A~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~in 191 (454)
|=.+-|-|-|-.++..-+..... +|+-++++---++||+ ++++.+|.|+||..+- +++-+. ++..-=
T Consensus 159 -VfN~RG~~g~~LtTpr~f~ag~t---~Dl~~~v~~i~~~~P~---a~l~avG~S~Gg~iL~---nYLGE~---g~~~~l 225 (409)
T KOG1838|consen 159 -VFNHRGLGGSKLTTPRLFTAGWT---EDLREVVNHIKKRYPQ---APLFAVGFSMGGNILT---NYLGEE---GDNTPL 225 (409)
T ss_pred -EECCCCCCCCccCCCceeecCCH---HHHHHHHHHHHHhCCC---CceEEEEecchHHHHH---HHhhhc---cCCCCc
Confidence 11255878777665543332222 3444555544567886 7999999999988643 444432 221212
Q ss_pred eeeeEecccCC
Q 012900 192 LGGVALGDSWI 202 (454)
Q Consensus 192 LkGi~iGNg~~ 202 (454)
..|++|-|||-
T Consensus 226 ~~a~~v~~Pwd 236 (409)
T KOG1838|consen 226 IAAVAVCNPWD 236 (409)
T ss_pred eeEEEEeccch
Confidence 56777766663
No 106
>PRK13604 luxD acyl transferase; Provisional
Probab=83.97 E-value=5.9 Score=38.89 Aligned_cols=129 Identities=15% Similarity=0.053 Sum_probs=73.9
Q ss_pred EEecCCceEEEEEEEcCCCCCCCCCCCCEEEEEcCCCChhhhhhccccccCCCcccCCCCccchhccccceeecCCcccc
Q 012900 41 VEVRPKAHMFWWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLKKADLLFVDNPVGTG 120 (454)
Q Consensus 41 v~v~~~~~lfywf~es~~~~~~p~~~~PlilWlnGGPGcSS~~~G~f~E~GP~~~~~~~n~~SW~~~anvLfiDqPvGtG 120 (454)
|.++++..|.=|+.+.++ +++.+ .|++|..+ |.|+....+ ...-.+=+.+-.++|-.|.=-|.|
T Consensus 14 ~~~~dG~~L~Gwl~~P~~--~~~~~-~~~vIi~H-Gf~~~~~~~------------~~~A~~La~~G~~vLrfD~rg~~G 77 (307)
T PRK13604 14 ICLENGQSIRVWETLPKE--NSPKK-NNTILIAS-GFARRMDHF------------AGLAEYLSSNGFHVIRYDSLHHVG 77 (307)
T ss_pred EEcCCCCEEEEEEEcCcc--cCCCC-CCEEEEeC-CCCCChHHH------------HHHHHHHHHCCCEEEEecCCCCCC
Confidence 344556678878877532 22323 37888776 566653211 111244567778999999775678
Q ss_pred cCCccCCCCcccchHHHHHHHHHHHHHHHHhccccCCCCEEEEecccCcchhHHHHHHHHHHHHcCCceeeeeeeEeccc
Q 012900 121 YSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDS 200 (454)
Q Consensus 121 fSy~~~~~~~~~~~~~~A~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkGi~iGNg 200 (454)
=|-++-.. ...+. ...|+...+. |++.. . ..++.|.|+|.||.-+...|. ..+++++++-.|
T Consensus 78 eS~G~~~~-~t~s~--g~~Dl~aaid-~lk~~-~--~~~I~LiG~SmGgava~~~A~-----------~~~v~~lI~~sp 139 (307)
T PRK13604 78 LSSGTIDE-FTMSI--GKNSLLTVVD-WLNTR-G--INNLGLIAASLSARIAYEVIN-----------EIDLSFLITAVG 139 (307)
T ss_pred CCCCcccc-Ccccc--cHHHHHHHHH-HHHhc-C--CCceEEEEECHHHHHHHHHhc-----------CCCCCEEEEcCC
Confidence 77443211 11122 2455544443 33332 1 357999999999987543332 124788888666
Q ss_pred CCC
Q 012900 201 WIS 203 (454)
Q Consensus 201 ~~~ 203 (454)
+.+
T Consensus 140 ~~~ 142 (307)
T PRK13604 140 VVN 142 (307)
T ss_pred ccc
Confidence 665
No 107
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=83.55 E-value=2.8 Score=38.01 Aligned_cols=58 Identities=16% Similarity=0.269 Sum_probs=47.8
Q ss_pred cchHHHHHHHHHHHHHHHHhccccCCCCEEEEecccCcchhHHHHHHHHHHHHcCCceeeeeeeEe
Q 012900 132 KNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVAL 197 (454)
Q Consensus 132 ~~~~~~A~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkGi~i 197 (454)
.+.+++|.|+-+.++.+.++ +..+.+.|.|-|+|.-.+|.+..++-...++ .++++.+
T Consensus 45 rtP~~~a~Dl~~~i~~y~~~---w~~~~vvLiGYSFGADvlP~~~nrLp~~~r~-----~v~~v~L 102 (192)
T PF06057_consen 45 RTPEQTAADLARIIRHYRAR---WGRKRVVLIGYSFGADVLPFIYNRLPAALRA-----RVAQVVL 102 (192)
T ss_pred CCHHHHHHHHHHHHHHHHHH---hCCceEEEEeecCCchhHHHHHhhCCHHHHh-----heeEEEE
Confidence 47889999999999988874 4468999999999999999999888765433 5777777
No 108
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=83.41 E-value=1.6 Score=44.28 Aligned_cols=54 Identities=13% Similarity=0.006 Sum_probs=41.3
Q ss_pred CceEEEEeccCCCCCChhhHHHHHHhcccccccccccCCceeeEeCCCceeeeEEEEEcCeEEEEEc-CCcccccccCCh
Q 012900 365 GVNVTVYNGQLDVICSTKGTEAWIEKLKWDGLQKFLSTERTPLFCGNDKITKGFKKSYKNLHFYWIL-GAGHFKNYCDTW 443 (454)
Q Consensus 365 ~irVLiy~Gd~D~i~n~~G~~~~i~~L~W~g~~~f~~a~~~~w~~~~~~~~~G~~k~~~nLtf~~V~-~AGHmvP~dqP~ 443 (454)
.+++||..|+.|.++|....+...+.+. +. + ...++++|. ++||+.+.++|+
T Consensus 309 ~~PtLvI~G~~D~~~p~~~~~~la~~i~-----------------~a-~---------~~~~l~~i~~~~GH~~~le~p~ 361 (379)
T PRK00175 309 KARFLVVSFTSDWLFPPARSREIVDALL-----------------AA-G---------ADVSYAEIDSPYGHDAFLLDDP 361 (379)
T ss_pred CCCEEEEEECCccccCHHHHHHHHHHHH-----------------hc-C---------CCeEEEEeCCCCCchhHhcCHH
Confidence 5899999999999999887766665554 00 0 124677785 899999999998
Q ss_pred hh
Q 012900 444 SG 445 (454)
Q Consensus 444 ~~ 445 (454)
..
T Consensus 362 ~~ 363 (379)
T PRK00175 362 RY 363 (379)
T ss_pred HH
Confidence 64
No 109
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=82.33 E-value=2.6 Score=38.31 Aligned_cols=52 Identities=19% Similarity=0.184 Sum_probs=40.9
Q ss_pred hcCceEEEEeccCCCCCChhhHHHHHHhcccccccccccCCceeeEeCCCceeeeEEEEEcCeEEEEEcCCcccccccCC
Q 012900 363 AKGVNVTVYNGQLDVICSTKGTEAWIEKLKWDGLQKFLSTERTPLFCGNDKITKGFKKSYKNLHFYWILGAGHFKNYCDT 442 (454)
Q Consensus 363 ~~~irVLiy~Gd~D~i~n~~G~~~~i~~L~W~g~~~f~~a~~~~w~~~~~~~~~G~~k~~~nLtf~~V~~AGHmvP~dqP 442 (454)
+-.+++|+++|..|.++|....+...+.+. +-.++++.++||....+.|
T Consensus 173 ~i~~p~l~i~~~~D~~~p~~~~~~~~~~~~-------------------------------~~~~~~~~~~GH~~~~~~~ 221 (230)
T PF00561_consen 173 NIKVPTLIIWGEDDPLVPPESSEQLAKLIP-------------------------------NSQLVLIEGSGHFAFLEGP 221 (230)
T ss_dssp TTTSEEEEEEETTCSSSHHHHHHHHHHHST-------------------------------TEEEEEETTCCSTHHHHSH
T ss_pred ccCCCeEEEEeCCCCCCCHHHHHHHHHhcC-------------------------------CCEEEECCCCChHHHhcCH
Confidence 457999999999999999877766444333 3456779999999999998
Q ss_pred hhh
Q 012900 443 WSG 445 (454)
Q Consensus 443 ~~~ 445 (454)
+..
T Consensus 222 ~~~ 224 (230)
T PF00561_consen 222 DEF 224 (230)
T ss_dssp HHH
T ss_pred Hhh
Confidence 764
No 110
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=81.18 E-value=2.7 Score=42.46 Aligned_cols=79 Identities=28% Similarity=0.395 Sum_probs=50.4
Q ss_pred hccccccCCCcccCCCCccchhccccceeec-------CCcccccCCccCCCCcccchHHHHHHHHHHHHHHHHhccccC
Q 012900 84 IGNFEEVGPFDTYLKPRNSTWLKKADLLFVD-------NPVGTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQ 156 (454)
Q Consensus 84 ~G~f~E~GP~~~~~~~n~~SW~~~anvLfiD-------qPvGtGfSy~~~~~~~~~~~~~~A~d~~~fL~~F~~~fP~~~ 156 (454)
.|++-|++|=. .|-|+|+| +|.|.- ||.+-..----|.+|+=.|+-+.|+ ++++...=+
T Consensus 100 tGFm~D~Ap~~------------~AllVFaEHRyYGeS~PFG~~-s~k~~~hlgyLtseQALADfA~ll~-~lK~~~~a~ 165 (492)
T KOG2183|consen 100 TGFMWDLAPEL------------KALLVFAEHRYYGESLPFGSQ-SYKDARHLGYLTSEQALADFAELLT-FLKRDLSAE 165 (492)
T ss_pred cchHHhhhHhh------------CceEEEeehhccccCCCCcch-hccChhhhccccHHHHHHHHHHHHH-HHhhccccc
Confidence 36666666622 35566666 687777 6654322223367777777766554 666554445
Q ss_pred CCCEEEEecccCcchhHHHH
Q 012900 157 KSPLFIVAESYGGKFAATLG 176 (454)
Q Consensus 157 ~~~~yi~GESYgG~yvP~lA 176 (454)
..|+..+|-||||+...-+-
T Consensus 166 ~~pvIafGGSYGGMLaAWfR 185 (492)
T KOG2183|consen 166 ASPVIAFGGSYGGMLAAWFR 185 (492)
T ss_pred cCcEEEecCchhhHHHHHHH
Confidence 78999999999997655543
No 111
>PLN02571 triacylglycerol lipase
Probab=81.16 E-value=4.8 Score=41.10 Aligned_cols=70 Identities=11% Similarity=0.101 Sum_probs=50.3
Q ss_pred hHHHHHHHHHHHHHHHHhccccCCCCEEEEecccCcchhHHHHHHHHHHH--Hc---CCceeeeeeeEecccCCCc
Q 012900 134 DVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAI--EA---GKLKLKLGGVALGDSWISP 204 (454)
Q Consensus 134 ~~~~A~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~lA~~i~~~~--~~---~~~~inLkGi~iGNg~~~p 204 (454)
...+.++++..++++.+++|.. ..+++|+|+|-||-.+-..|..|.... .. ....+++..+..|.|-+..
T Consensus 203 k~Sar~qvl~eV~~L~~~y~~e-~~sI~VTGHSLGGALAtLaA~dl~~~g~n~~~~~~~~~~~V~v~TFGsPRVGN 277 (413)
T PLN02571 203 KTSARDQVLNEVGRLVEKYKDE-EISITICGHSLGAALATLNAVDIVANGFNRSKSRPNKSCPVTAFVFASPRVGD 277 (413)
T ss_pred hhhHHHHHHHHHHHHHHhcCcc-cccEEEeccchHHHHHHHHHHHHHHhcccccccccccCcceEEEEeCCCCccC
Confidence 3467788999999999888764 347999999999999988888876421 10 1113456677777777753
No 112
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=80.86 E-value=4 Score=37.08 Aligned_cols=41 Identities=20% Similarity=0.331 Sum_probs=31.6
Q ss_pred CCCCEEEEecccCcchhHHHHHHHHHHHHcCCceeeeeeeEecccCCCchhhh
Q 012900 156 QKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWISPEDFV 208 (454)
Q Consensus 156 ~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkGi~iGNg~~~p~~~~ 208 (454)
....+.|.|-|-||.|+-.+|.+. +++. +|-||.+.|....
T Consensus 57 ~~~~~~liGSSlGG~~A~~La~~~-----------~~~a-vLiNPav~p~~~l 97 (187)
T PF05728_consen 57 KPENVVLIGSSLGGFYATYLAERY-----------GLPA-VLINPAVRPYELL 97 (187)
T ss_pred CCCCeEEEEEChHHHHHHHHHHHh-----------CCCE-EEEcCCCCHHHHH
Confidence 345599999999999999998654 4566 5669999886543
No 113
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=80.53 E-value=3.1 Score=33.75 Aligned_cols=28 Identities=21% Similarity=0.330 Sum_probs=26.0
Q ss_pred CceEEEEeccCCCCCChhhHHHHHHhcc
Q 012900 365 GVNVTVYNGQLDVICSTKGTEAWIEKLK 392 (454)
Q Consensus 365 ~irVLiy~Gd~D~i~n~~G~~~~i~~L~ 392 (454)
..+||+.++..|.++|+.+.++..++|.
T Consensus 34 ~~piL~l~~~~Dp~TP~~~a~~~~~~l~ 61 (103)
T PF08386_consen 34 APPILVLGGTHDPVTPYEGARAMAARLP 61 (103)
T ss_pred CCCEEEEecCcCCCCcHHHHHHHHHHCC
Confidence 3899999999999999999999988887
No 114
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=80.51 E-value=2.9 Score=35.40 Aligned_cols=62 Identities=16% Similarity=0.195 Sum_probs=42.9
Q ss_pred HHHHHHHHHHHHHHHhccccCCCCEEEEecccCcchhHHHHHHHHHHHHcCCceeeeeeeEecccCC
Q 012900 136 EAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWI 202 (454)
Q Consensus 136 ~~A~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkGi~iGNg~~ 202 (454)
...+.+.+.|++..+++| +..+.|+|+|-||-.+..+|..+.+.... ...+++-+..|.|-+
T Consensus 45 ~~~~~~~~~l~~~~~~~~---~~~i~itGHSLGGalA~l~a~~l~~~~~~--~~~~~~~~~fg~P~~ 106 (140)
T PF01764_consen 45 SLYDQILDALKELVEKYP---DYSIVITGHSLGGALASLAAADLASHGPS--SSSNVKCYTFGAPRV 106 (140)
T ss_dssp HHHHHHHHHHHHHHHHST---TSEEEEEEETHHHHHHHHHHHHHHHCTTT--STTTEEEEEES-S--
T ss_pred HHHHHHHHHHHHHHhccc---CccchhhccchHHHHHHHHHHhhhhcccc--cccceeeeecCCccc
Confidence 455567777777777776 47899999999999999999888763221 134566676666655
No 115
>PRK10749 lysophospholipase L2; Provisional
Probab=80.41 E-value=1.5 Score=43.54 Aligned_cols=54 Identities=13% Similarity=0.098 Sum_probs=42.2
Q ss_pred CceEEEEeccCCCCCChhhHHHHHHhcccccccccccCCceeeEeCCCceeeeEEEEEcCeEEEEEcCCcccccccCC
Q 012900 365 GVNVTVYNGQLDVICSTKGTEAWIEKLKWDGLQKFLSTERTPLFCGNDKITKGFKKSYKNLHFYWILGAGHFKNYCDT 442 (454)
Q Consensus 365 ~irVLiy~Gd~D~i~n~~G~~~~i~~L~W~g~~~f~~a~~~~w~~~~~~~~~G~~k~~~nLtf~~V~~AGHmvP~dqP 442 (454)
.++|||.+|..|.+++..+++.+.+.++=.+. + ..+-+++++.||||++..++|
T Consensus 259 ~~P~Lii~G~~D~vv~~~~~~~~~~~l~~~~~---------~---------------~~~~~l~~~~gagH~~~~E~~ 312 (330)
T PRK10749 259 TTPLLLLQAEEERVVDNRMHDRFCEARTAAGH---------P---------------CEGGKPLVIKGAYHEILFEKD 312 (330)
T ss_pred CCCEEEEEeCCCeeeCHHHHHHHHHHHhhcCC---------C---------------CCCceEEEeCCCcchhhhCCc
Confidence 58999999999999999999888777751110 0 013467889999999999988
No 116
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=80.26 E-value=2.9 Score=38.49 Aligned_cols=42 Identities=14% Similarity=0.086 Sum_probs=33.9
Q ss_pred HHHHHHHHHHHHHHHHhccccCCCCEEEEecccCcchhHHHHHH
Q 012900 135 VEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLA 178 (454)
Q Consensus 135 ~~~A~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~lA~~ 178 (454)
+-+-.|+..+++.|++.+++ +|||.|+|+|=|+..+-.|-++
T Consensus 74 ~~ay~DV~~AF~~yL~~~n~--GRPfILaGHSQGs~~l~~LL~e 115 (207)
T PF11288_consen 74 DLAYSDVRAAFDYYLANYNN--GRPFILAGHSQGSMHLLRLLKE 115 (207)
T ss_pred HhhHHHHHHHHHHHHHhcCC--CCCEEEEEeChHHHHHHHHHHH
Confidence 44567888999999998876 8999999999998876655443
No 117
>PRK06489 hypothetical protein; Provisional
Probab=80.11 E-value=3.6 Score=41.27 Aligned_cols=51 Identities=20% Similarity=0.081 Sum_probs=36.1
Q ss_pred CceEEEEeccCCCCCChhhH--HHHHHhcccccccccccCCceeeEeCCCceeeeEEEEEcCeEEEEEcCC----ccccc
Q 012900 365 GVNVTVYNGQLDVICSTKGT--EAWIEKLKWDGLQKFLSTERTPLFCGNDKITKGFKKSYKNLHFYWILGA----GHFKN 438 (454)
Q Consensus 365 ~irVLiy~Gd~D~i~n~~G~--~~~i~~L~W~g~~~f~~a~~~~w~~~~~~~~~G~~k~~~nLtf~~V~~A----GHmvP 438 (454)
.++|||+.|+.|.++|.... +...+.+. +-.+++|.+| ||++.
T Consensus 292 ~~PvLvI~G~~D~~~p~~~~~~~~la~~ip-------------------------------~a~l~~i~~a~~~~GH~~~ 340 (360)
T PRK06489 292 KAPVLAINSADDERNPPETGVMEAALKRVK-------------------------------HGRLVLIPASPETRGHGTT 340 (360)
T ss_pred CCCEEEEecCCCcccChhhHHHHHHHHhCc-------------------------------CCeEEEECCCCCCCCcccc
Confidence 68999999999999986543 22222221 2356788886 99985
Q ss_pred ccCChhhhh
Q 012900 439 YCDTWSGKR 447 (454)
Q Consensus 439 ~dqP~~~~~ 447 (454)
++|+..-+
T Consensus 341 -e~P~~~~~ 348 (360)
T PRK06489 341 -GSAKFWKA 348 (360)
T ss_pred -cCHHHHHH
Confidence 89987644
No 118
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=79.90 E-value=2.5 Score=38.68 Aligned_cols=52 Identities=17% Similarity=0.163 Sum_probs=40.7
Q ss_pred cCceEEEEeccCCCCCChhhHHHHHHhcccccccccccCCceeeEeCCCceeeeEEEEEcCeEEEEEcCCcccccccCC
Q 012900 364 KGVNVTVYNGQLDVICSTKGTEAWIEKLKWDGLQKFLSTERTPLFCGNDKITKGFKKSYKNLHFYWILGAGHFKNYCDT 442 (454)
Q Consensus 364 ~~irVLiy~Gd~D~i~n~~G~~~~i~~L~W~g~~~f~~a~~~~w~~~~~~~~~G~~k~~~nLtf~~V~~AGHmvP~dqP 442 (454)
...+|||++|+.|.+||...++.+.+.|.-.| ....++++.++||-...++.
T Consensus 143 ~~~P~li~hG~~D~~Vp~~~s~~~~~~L~~~g---------------------------~~~~~~~~p~~gH~~~~~~~ 194 (213)
T PF00326_consen 143 IKPPVLIIHGENDPRVPPSQSLRLYNALRKAG---------------------------KPVELLIFPGEGHGFGNPEN 194 (213)
T ss_dssp GGSEEEEEEETTBSSSTTHHHHHHHHHHHHTT---------------------------SSEEEEEETT-SSSTTSHHH
T ss_pred CCCCEEEEccCCCCccCHHHHHHHHHHHHhcC---------------------------CCEEEEEcCcCCCCCCCchh
Confidence 45899999999999999999999999998221 14677889999996554433
No 119
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=79.61 E-value=4.4 Score=34.05 Aligned_cols=33 Identities=18% Similarity=0.240 Sum_probs=26.6
Q ss_pred HHhhcCceEEEEeccCCCCCChhhHHHHHHhcc
Q 012900 360 ELLAKGVNVTVYNGQLDVICSTKGTEAWIEKLK 392 (454)
Q Consensus 360 ~LL~~~irVLiy~Gd~D~i~n~~G~~~~i~~L~ 392 (454)
.+-...++|++..|..|.+++....+.+.++++
T Consensus 99 ~~~~~~~pv~~i~g~~D~~~~~~~~~~~~~~~~ 131 (145)
T PF12695_consen 99 DLAKIRIPVLFIHGENDPLVPPEQVRRLYEALP 131 (145)
T ss_dssp HHTTTTSEEEEEEETT-SSSHHHHHHHHHHHHC
T ss_pred hhhccCCcEEEEEECCCCcCCHHHHHHHHHHcC
Confidence 444567899999999999999888888777776
No 120
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=79.49 E-value=4.1 Score=41.31 Aligned_cols=62 Identities=23% Similarity=0.213 Sum_probs=46.4
Q ss_pred HHHHHHHHHHHHHHHHhccccCC-CCEEEEecccCcchhHHHHHHHHHHHHcCCceeeeeeeEecccCCCch
Q 012900 135 VEAANDLTTLLMELFNKNEILQK-SPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWISPE 205 (454)
Q Consensus 135 ~~~A~d~~~fL~~F~~~fP~~~~-~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkGi~iGNg~~~p~ 205 (454)
--.|.|...+|.....+||.... .|..+.|.||||. ...++.+|. +-.+.||+=-.+|+-|.
T Consensus 160 IMqAiD~INAl~~l~k~~~~~~~~lp~I~~G~s~G~y-la~l~~k~a--------P~~~~~~iDns~~~~p~ 222 (403)
T PF11144_consen 160 IMQAIDIINALLDLKKIFPKNGGGLPKIYIGSSHGGY-LAHLCAKIA--------PWLFDGVIDNSSYALPP 222 (403)
T ss_pred HHHHHHHHHHHHHHHHhhhcccCCCcEEEEecCcHHH-HHHHHHhhC--------ccceeEEEecCccccch
Confidence 45688899999988899999985 7999999999874 555555552 34577776666676664
No 121
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=79.35 E-value=3.8 Score=35.52 Aligned_cols=43 Identities=23% Similarity=0.254 Sum_probs=31.7
Q ss_pred HHHHHHHHHHHHHHHhccccCCCCEEEEecccCcchhHHHHHHHHH
Q 012900 136 EAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVK 181 (454)
Q Consensus 136 ~~A~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~lA~~i~~ 181 (454)
.+++.+...+++....+|. .+++|+|+|-||..+-.+|..+.+
T Consensus 9 ~~~~~i~~~~~~~~~~~p~---~~i~v~GHSlGg~lA~l~a~~~~~ 51 (153)
T cd00741 9 SLANLVLPLLKSALAQYPD---YKIHVTGHSLGGALAGLAGLDLRG 51 (153)
T ss_pred HHHHHHHHHHHHHHHHCCC---CeEEEEEcCHHHHHHHHHHHHHHh
Confidence 4455555556665555564 699999999999999988887754
No 122
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=79.34 E-value=4.1 Score=41.58 Aligned_cols=57 Identities=18% Similarity=0.168 Sum_probs=42.7
Q ss_pred hcCceEEEEeccCCCCCChhhHHHHHHhcccccccccccCCceeeEeCCCceeeeEEEEEcCeEEEEEcC-CcccccccC
Q 012900 363 AKGVNVTVYNGQLDVICSTKGTEAWIEKLKWDGLQKFLSTERTPLFCGNDKITKGFKKSYKNLHFYWILG-AGHFKNYCD 441 (454)
Q Consensus 363 ~~~irVLiy~Gd~D~i~n~~G~~~~i~~L~W~g~~~f~~a~~~~w~~~~~~~~~G~~k~~~nLtf~~V~~-AGHmvP~dq 441 (454)
.-..+|||..|+.|.++|..-.+...+.+. ..+ .+.++++|.+ +||+++.++
T Consensus 321 ~I~~PtLvI~G~~D~l~p~~~~~~la~~lp------------------~~~---------~~a~l~~I~s~~GH~~~le~ 373 (389)
T PRK06765 321 NIEANVLMIPCKQDLLQPPRYNYKMVDILQ------------------KQG---------KYAEVYEIESINGHMAGVFD 373 (389)
T ss_pred cCCCCEEEEEeCCCCCCCHHHHHHHHHHhh------------------hcC---------CCeEEEEECCCCCcchhhcC
Confidence 336899999999999999877666555543 000 2467788985 999999999
Q ss_pred Chhhh
Q 012900 442 TWSGK 446 (454)
Q Consensus 442 P~~~~ 446 (454)
|+..-
T Consensus 374 p~~~~ 378 (389)
T PRK06765 374 IHLFE 378 (389)
T ss_pred HHHHH
Confidence 98754
No 123
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=77.24 E-value=6.7 Score=38.83 Aligned_cols=61 Identities=20% Similarity=0.279 Sum_probs=41.1
Q ss_pred ccccceeecCCcccccCCccCCCCcccchHHHHHHHHHHHHHHHHhcc-ccCCCCEEEEecccCcchhHH
Q 012900 106 KKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNE-ILQKSPLFIVAESYGGKFAAT 174 (454)
Q Consensus 106 ~~anvLfiDqPvGtGfSy~~~~~~~~~~~~~~A~d~~~fL~~F~~~fP-~~~~~~~yi~GESYgG~yvP~ 174 (454)
..+|+|..--| |||+|.+. + +.++...+- +++-+++...+ .-+.+.+.+.|.|-||-....
T Consensus 170 ~~aNvl~fNYp-GVg~S~G~-----~-s~~dLv~~~-~a~v~yL~d~~~G~ka~~Ii~yG~SLGG~Vqa~ 231 (365)
T PF05677_consen 170 LGANVLVFNYP-GVGSSTGP-----P-SRKDLVKDY-QACVRYLRDEEQGPKAKNIILYGHSLGGGVQAE 231 (365)
T ss_pred cCCcEEEECCC-ccccCCCC-----C-CHHHHHHHH-HHHHHHHHhcccCCChheEEEeeccccHHHHHH
Confidence 36899999988 99999654 2 234444433 44445554433 345689999999999986543
No 124
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=76.85 E-value=5.8 Score=36.94 Aligned_cols=61 Identities=15% Similarity=0.141 Sum_probs=42.0
Q ss_pred HHHHHHHHHHHHHHHhccccCCCCEEEEecccCcchhHHHHHHHHHHHHcCCceeeeeeeEecccCCC
Q 012900 136 EAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWIS 203 (454)
Q Consensus 136 ~~A~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkGi~iGNg~~~ 203 (454)
...+++...+++..+++|. .+++++|+|-||-.+-.+|..+.+.. ...+++.+..|.|-+.
T Consensus 109 ~~~~~~~~~~~~~~~~~p~---~~i~vtGHSLGGaiA~l~a~~l~~~~----~~~~i~~~tFg~P~vg 169 (229)
T cd00519 109 SLYNQVLPELKSALKQYPD---YKIIVTGHSLGGALASLLALDLRLRG----PGSDVTVYTFGQPRVG 169 (229)
T ss_pred HHHHHHHHHHHHHHhhCCC---ceEEEEccCHHHHHHHHHHHHHHhhC----CCCceEEEEeCCCCCC
Confidence 3444455556666665554 68999999999999988888776532 1235778887777664
No 125
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=75.17 E-value=1.8 Score=43.13 Aligned_cols=71 Identities=20% Similarity=0.229 Sum_probs=48.6
Q ss_pred ccccceeecCCcccccCCccCCCCcccchHHHHHHHHHHHHHHHHhccccCCCCEEEEecccCcchhHHHHHHHHH
Q 012900 106 KKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVK 181 (454)
Q Consensus 106 ~~anvLfiDqPvGtGfSy~~~~~~~~~~~~~~A~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~lA~~i~~ 181 (454)
...|||.||--.+..-.|.. .+.+...+++.+-.||+.+...+ .+.-.++||.|+|-|+|.+=..++++..
T Consensus 103 ~d~NVI~VDWs~~a~~~Y~~----a~~n~~~vg~~la~~l~~L~~~~-g~~~~~ihlIGhSLGAHvaG~aG~~~~~ 173 (331)
T PF00151_consen 103 GDYNVIVVDWSRGASNNYPQ----AVANTRLVGRQLAKFLSFLINNF-GVPPENIHLIGHSLGAHVAGFAGKYLKG 173 (331)
T ss_dssp S-EEEEEEE-HHHHSS-HHH----HHHHHHHHHHHHHHHHHHHHHHH----GGGEEEEEETCHHHHHHHHHHHTTT
T ss_pred CCceEEEEcchhhccccccc----hhhhHHHHHHHHHHHHHHHHhhc-CCChhHEEEEeeccchhhhhhhhhhccC
Confidence 46799999987777655542 24456777888888887766432 2345789999999999988888777643
No 126
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=74.50 E-value=5.4 Score=40.78 Aligned_cols=54 Identities=13% Similarity=0.025 Sum_probs=41.1
Q ss_pred CceEEEEeccCCCCCChhhHHHHHHhcccccccccccCCceeeEeCCCceeeeEEEEEcCeEEEEEcCCccccccc-CCh
Q 012900 365 GVNVTVYNGQLDVICSTKGTEAWIEKLKWDGLQKFLSTERTPLFCGNDKITKGFKKSYKNLHFYWILGAGHFKNYC-DTW 443 (454)
Q Consensus 365 ~irVLiy~Gd~D~i~n~~G~~~~i~~L~W~g~~~f~~a~~~~w~~~~~~~~~G~~k~~~nLtf~~V~~AGHmvP~d-qP~ 443 (454)
++++||.+|+.|.++|...++.+.+++.=. .=++..+.+++|++..+ .|+
T Consensus 324 ~vPvLIi~G~~D~vvp~~~a~~l~~~~~~~-----------------------------~k~l~~~~ga~H~l~~e~~~e 374 (395)
T PLN02652 324 TVPFMVLHGTADRVTDPLASQDLYNEAASR-----------------------------HKDIKLYDGFLHDLLFEPERE 374 (395)
T ss_pred CCCEEEEEeCCCCCCCHHHHHHHHHhcCCC-----------------------------CceEEEECCCeEEeccCCCHH
Confidence 699999999999999999998887776410 01234578999999877 677
Q ss_pred hhhh
Q 012900 444 SGKR 447 (454)
Q Consensus 444 ~~~~ 447 (454)
.+++
T Consensus 375 ~v~~ 378 (395)
T PLN02652 375 EVGR 378 (395)
T ss_pred HHHH
Confidence 6654
No 127
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=74.12 E-value=5.2 Score=36.32 Aligned_cols=23 Identities=26% Similarity=0.166 Sum_probs=19.1
Q ss_pred CeEEEEEcCCcccccccCChhhh
Q 012900 424 NLHFYWILGAGHFKNYCDTWSGK 446 (454)
Q Consensus 424 nLtf~~V~~AGHmvP~dqP~~~~ 446 (454)
+.+++++.++||+++.++|+...
T Consensus 221 ~~~~~~~~~~gH~~~~e~~~~~~ 243 (251)
T TIGR03695 221 NLTLVIIANAGHNIHLENPEAFA 243 (251)
T ss_pred CCcEEEEcCCCCCcCccChHHHH
Confidence 45677889999999999998754
No 128
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=74.03 E-value=3.8 Score=39.34 Aligned_cols=83 Identities=17% Similarity=0.095 Sum_probs=54.8
Q ss_pred cccceeecCCcccccCCccCCCCcccchHHHHHHHHHHHHHHHHhccccCCCCEEEEecccCcchhHHHHHHHHHHHHcC
Q 012900 107 KADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAG 186 (454)
Q Consensus 107 ~anvLfiDqPvGtGfSy~~~~~~~~~~~~~~A~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~ 186 (454)
=..+|.+|.- |+|-|.+.-. ....+-++|.++.++ |....|- .+-++-++|-||+|......|..-
T Consensus 57 GY~vV~~D~R-G~g~S~G~~~----~~~~~e~~D~~d~I~-W~~~Qpw-s~G~VGm~G~SY~G~~q~~~A~~~------- 122 (272)
T PF02129_consen 57 GYAVVVQDVR-GTGGSEGEFD----PMSPNEAQDGYDTIE-WIAAQPW-SNGKVGMYGISYGGFTQWAAAARR------- 122 (272)
T ss_dssp T-EEEEEE-T-TSTTS-S-B-----TTSHHHHHHHHHHHH-HHHHCTT-EEEEEEEEEETHHHHHHHHHHTTT-------
T ss_pred CCEEEEECCc-ccccCCCccc----cCChhHHHHHHHHHH-HHHhCCC-CCCeEEeeccCHHHHHHHHHHhcC-------
Confidence 4578888855 9999987522 114556666766664 7776654 455799999999999888777521
Q ss_pred CceeeeeeeEecccCCCch
Q 012900 187 KLKLKLGGVALGDSWISPE 205 (454)
Q Consensus 187 ~~~inLkGi~iGNg~~~p~ 205 (454)
.-.||.|+..-++.|..
T Consensus 123 --~p~LkAi~p~~~~~d~~ 139 (272)
T PF02129_consen 123 --PPHLKAIVPQSGWSDLY 139 (272)
T ss_dssp ---TTEEEEEEESE-SBTC
T ss_pred --CCCceEEEecccCCccc
Confidence 23699999887777654
No 129
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=73.95 E-value=4.8 Score=41.61 Aligned_cols=66 Identities=21% Similarity=0.251 Sum_probs=43.6
Q ss_pred cchHHHHHHHHHHHHHHHHhccccCCCCEEEEecccCcchhHHHHHHHHHHHHcCCceeeeeeeEecccCCCchh
Q 012900 132 KNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWISPED 206 (454)
Q Consensus 132 ~~~~~~A~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkGi~iGNg~~~p~~ 206 (454)
-|.+|+-.|+..|++.+-.++....+.|+.++|-||||..+.-+-.+- +. -+.|..--.|.+....
T Consensus 87 Lt~~QALaD~a~F~~~~~~~~~~~~~~pwI~~GgSY~G~Laaw~r~ky-----P~----~~~ga~ASSapv~a~~ 152 (434)
T PF05577_consen 87 LTSEQALADLAYFIRYVKKKYNTAPNSPWIVFGGSYGGALAAWFRLKY-----PH----LFDGAWASSAPVQAKV 152 (434)
T ss_dssp -SHHHHHHHHHHHHHHHHHHTTTGCC--EEEEEETHHHHHHHHHHHH------TT----T-SEEEEET--CCHCC
T ss_pred cCHHHHHHHHHHHHHHHHHhhcCCCCCCEEEECCcchhHHHHHHHhhC-----CC----eeEEEEeccceeeeec
Confidence 578999999999999888777666778999999999998666554322 11 2556666566665543
No 130
>PRK04940 hypothetical protein; Provisional
Probab=73.82 E-value=9.4 Score=34.37 Aligned_cols=61 Identities=15% Similarity=0.215 Sum_probs=40.4
Q ss_pred cchHHHHHHHHHHHHHHHHhccccCCCCEEEEecccCcchhHHHHHHHHHHHHcCCceeeeeeeEecccCCCchhh
Q 012900 132 KNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWISPEDF 207 (454)
Q Consensus 132 ~~~~~~A~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkGi~iGNg~~~p~~~ 207 (454)
....++...+.+.+.++... .. ..++.|.|-|-||.|+..+|.+- .++.|+| ||.+.|...
T Consensus 37 ~~P~~a~~~l~~~i~~~~~~--~~-~~~~~liGSSLGGyyA~~La~~~-----------g~~aVLi-NPAv~P~~~ 97 (180)
T PRK04940 37 LHPKHDMQHLLKEVDKMLQL--SD-DERPLICGVGLGGYWAERIGFLC-----------GIRQVIF-NPNLFPEEN 97 (180)
T ss_pred CCHHHHHHHHHHHHHHhhhc--cC-CCCcEEEEeChHHHHHHHHHHHH-----------CCCEEEE-CCCCChHHH
Confidence 34555555455555443221 11 24789999999999999998653 5676655 999999654
No 131
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=73.45 E-value=6.8 Score=37.03 Aligned_cols=94 Identities=20% Similarity=0.278 Sum_probs=49.5
Q ss_pred CCCCEEEEEcCCCChhhhhhccccccCCCc-ccCCC-C-ccchhccccceeecCCcccccCCccCCC---CcccchHHHH
Q 012900 65 KPWPIILWLQGGPGASGVGIGNFEEVGPFD-TYLKP-R-NSTWLKKADLLFVDNPVGTGYSYVEDNS---SFVKNDVEAA 138 (454)
Q Consensus 65 ~~~PlilWlnGGPGcSS~~~G~f~E~GP~~-~~~~~-n-~~SW~~~anvLfiDqPvGtGfSy~~~~~---~~~~~~~~~A 138 (454)
+++|+++|+-|-||-++. + +|.|-=. .++.. . .|.-....+. +-| -|-.++.+ ..-.+.++..
T Consensus 27 ~~~~li~~IpGNPG~~gF-Y---~~F~~~L~~~l~~r~~~wtIsh~~H~---~~P----~sl~~~~s~~~~eifsL~~QV 95 (301)
T KOG3975|consen 27 EDKPLIVWIPGNPGLLGF-Y---TEFARHLHLNLIDRLPVWTISHAGHA---LMP----ASLREDHSHTNEEIFSLQDQV 95 (301)
T ss_pred CCceEEEEecCCCCchhH-H---HHHHHHHHHhcccccceeEEeccccc---cCC----cccccccccccccccchhhHH
Confidence 456999999999998764 3 4333211 11111 1 1211111111 223 11111111 1223455566
Q ss_pred HHHHHHHHHHHHhccccCCCCEEEEecccCcchhHH
Q 012900 139 NDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAAT 174 (454)
Q Consensus 139 ~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~ 174 (454)
++=.+|++++. | +++++||.|+|=|...+-.
T Consensus 96 ~HKlaFik~~~---P--k~~ki~iiGHSiGaYm~Lq 126 (301)
T KOG3975|consen 96 DHKLAFIKEYV---P--KDRKIYIIGHSIGAYMVLQ 126 (301)
T ss_pred HHHHHHHHHhC---C--CCCEEEEEecchhHHHHHH
Confidence 66678888764 3 4789999999998554443
No 132
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=73.16 E-value=6.8 Score=43.68 Aligned_cols=88 Identities=14% Similarity=0.131 Sum_probs=55.9
Q ss_pred hccccceeecCCcccccCCccCCCCcccchHHHHHHHHHHHHHHHHhcc--------------ccCCCCEEEEecccCcc
Q 012900 105 LKKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNE--------------ILQKSPLFIVAESYGGK 170 (454)
Q Consensus 105 ~~~anvLfiDqPvGtGfSy~~~~~~~~~~~~~~A~d~~~fL~~F~~~fP--------------~~~~~~~yi~GESYgG~ 170 (454)
..-.+++++|.+ |+|-|-+.-. . -..+-.+|..+.+. |+...+ .+.+-++-++|.||+|.
T Consensus 277 ~rGYaVV~~D~R-Gtg~SeG~~~---~-~~~~E~~D~~~vIe-Wl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~SY~G~ 350 (767)
T PRK05371 277 PRGFAVVYVSGI-GTRGSDGCPT---T-GDYQEIESMKAVID-WLNGRATAYTDRTRGKEVKADWSNGKVAMTGKSYLGT 350 (767)
T ss_pred hCCeEEEEEcCC-CCCCCCCcCc---c-CCHHHHHHHHHHHH-HHhhCCccccccccccccccCCCCCeeEEEEEcHHHH
Confidence 346789999976 9999876521 1 11233344444443 554221 23356899999999998
Q ss_pred hhHHHHHHHHHHHHcCCceeeeeeeEecccCCCchhh
Q 012900 171 FAATLGLAAVKAIEAGKLKLKLGGVALGDSWISPEDF 207 (454)
Q Consensus 171 yvP~lA~~i~~~~~~~~~~inLkGi~iGNg~~~p~~~ 207 (454)
..-.+|..- .-.||.|+--.|+.+..+.
T Consensus 351 ~~~~aAa~~---------pp~LkAIVp~a~is~~yd~ 378 (767)
T PRK05371 351 LPNAVATTG---------VEGLETIIPEAAISSWYDY 378 (767)
T ss_pred HHHHHHhhC---------CCcceEEEeeCCCCcHHHH
Confidence 777666321 2268999988888775543
No 133
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=70.73 E-value=7.4 Score=38.76 Aligned_cols=51 Identities=22% Similarity=0.222 Sum_probs=37.8
Q ss_pred hcCceEEEEeccCCCCCChhhHHHHHHhcccccccccccCCceeeEeCCCceeeeEEEEEcCeEEEEEcCCcccccccCC
Q 012900 363 AKGVNVTVYNGQLDVICSTKGTEAWIEKLKWDGLQKFLSTERTPLFCGNDKITKGFKKSYKNLHFYWILGAGHFKNYCDT 442 (454)
Q Consensus 363 ~~~irVLiy~Gd~D~i~n~~G~~~~i~~L~W~g~~~f~~a~~~~w~~~~~~~~~G~~k~~~nLtf~~V~~AGHmvP~dqP 442 (454)
+-.++||+.+|+.|.+||....+ .+ +.+.++.++.++||+...++|
T Consensus 312 ~i~~Pvlii~g~~D~~vp~~~~~----~l------------------------------~~~~~~~~~~~~gH~~~~e~p 357 (371)
T PRK14875 312 SLAIPVLVIWGEQDRIIPAAHAQ----GL------------------------------PDGVAVHVLPGAGHMPQMEAA 357 (371)
T ss_pred cCCCCEEEEEECCCCccCHHHHh----hc------------------------------cCCCeEEEeCCCCCChhhhCH
Confidence 34689999999999999753221 00 124566789999999999999
Q ss_pred hhhhh
Q 012900 443 WSGKR 447 (454)
Q Consensus 443 ~~~~~ 447 (454)
+...+
T Consensus 358 ~~~~~ 362 (371)
T PRK14875 358 ADVNR 362 (371)
T ss_pred HHHHH
Confidence 87654
No 134
>PLN02511 hydrolase
Probab=70.30 E-value=5.2 Score=40.69 Aligned_cols=52 Identities=15% Similarity=0.056 Sum_probs=37.1
Q ss_pred hcCceEEEEeccCCCCCChhhHHHHHHhcccccccccccCCceeeEeCCCceeeeEEEEEcCeEEEEEcCCcccccccCC
Q 012900 363 AKGVNVTVYNGQLDVICSTKGTEAWIEKLKWDGLQKFLSTERTPLFCGNDKITKGFKKSYKNLHFYWILGAGHFKNYCDT 442 (454)
Q Consensus 363 ~~~irVLiy~Gd~D~i~n~~G~~~~i~~L~W~g~~~f~~a~~~~w~~~~~~~~~G~~k~~~nLtf~~V~~AGHmvP~dqP 442 (454)
+-.+++||.+|+.|.++|.......+ .+...+..++++.++||+...++|
T Consensus 296 ~I~vPtLiI~g~dDpi~p~~~~~~~~------------------------------~~~~p~~~l~~~~~gGH~~~~E~p 345 (388)
T PLN02511 296 HVRVPLLCIQAANDPIAPARGIPRED------------------------------IKANPNCLLIVTPSGGHLGWVAGP 345 (388)
T ss_pred cCCCCeEEEEcCCCCcCCcccCcHhH------------------------------HhcCCCEEEEECCCcceeccccCC
Confidence 34689999999999999743221000 011236788999999999999999
Q ss_pred hh
Q 012900 443 WS 444 (454)
Q Consensus 443 ~~ 444 (454)
+.
T Consensus 346 ~~ 347 (388)
T PLN02511 346 EA 347 (388)
T ss_pred CC
Confidence 64
No 135
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=70.02 E-value=8 Score=36.39 Aligned_cols=70 Identities=17% Similarity=0.143 Sum_probs=44.8
Q ss_pred chHHHHHHHHHHHHHHHHhccccCCCCEEEEecccCcchhHHHHHHHHHHHHcCCceeeeeeeEecccCCCch
Q 012900 133 NDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWISPE 205 (454)
Q Consensus 133 ~~~~~A~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkGi~iGNg~~~p~ 205 (454)
+....+..+.+||+...+.. ...+++|.++|.|++-+-.....+.......+..-+|..|++-+|-++..
T Consensus 71 ~a~~s~~~l~~~L~~L~~~~---~~~~I~ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~ApDid~d 140 (233)
T PF05990_consen 71 SARFSGPALARFLRDLARAP---GIKRIHILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAPDIDND 140 (233)
T ss_pred hHHHHHHHHHHHHHHHHhcc---CCceEEEEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECCCCCHH
Confidence 34445555666665554331 35799999999999987776666654322111223788889988887753
No 136
>PF03283 PAE: Pectinacetylesterase
Probab=70.00 E-value=40 Score=34.04 Aligned_cols=121 Identities=14% Similarity=0.075 Sum_probs=66.8
Q ss_pred CEEEEEcCCCChhhhhh---ccccccCCCcc-------------cCCCCccchhccccceeecCCcccccCCccCCCCcc
Q 012900 68 PIILWLQGGPGASGVGI---GNFEEVGPFDT-------------YLKPRNSTWLKKADLLFVDNPVGTGYSYVEDNSSFV 131 (454)
Q Consensus 68 PlilWlnGGPGcSS~~~---G~f~E~GP~~~-------------~~~~n~~SW~~~anvLfiDqPvGtGfSy~~~~~~~~ 131 (454)
-+||.|+||=-|.+... -...++|-... +...||.-++ .|++||=-=.|.-|+= +.....
T Consensus 51 ~~li~leGGG~C~~~~tC~~r~~t~~gss~~~~~~~~~~Gils~~~~~Np~f~~--wN~V~vpYC~Gd~~~G--~~~~~~ 126 (361)
T PF03283_consen 51 KWLIFLEGGGWCWDAETCAQRSSTNLGSSKNWPKTFAFSGILSNDPAENPDFYN--WNHVFVPYCDGDSHSG--DVEPVD 126 (361)
T ss_pred eEEEEeccchhcCChhHHhhhccCccccccchhhhccccccccCCcccCCcccc--ccEEEEEecCCccccC--cccccc
Confidence 69999999999987421 11223343221 1123553222 5678885544555543 111111
Q ss_pred cc----hHHHHHHHHHHHHHHHHh-ccccCCCCEEEEecccCcchhHHHHHHHHHHHHcCCceeeeeeeEe
Q 012900 132 KN----DVEAANDLTTLLMELFNK-NEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVAL 197 (454)
Q Consensus 132 ~~----~~~~A~d~~~fL~~F~~~-fP~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkGi~i 197 (454)
.. --..++.+-+.|.....+ +++ ...+.|+|.|=||.=+..-+.++.+.... ...++++.=
T Consensus 127 ~~~~~l~frG~~i~~avl~~l~~~gl~~--a~~vlltG~SAGG~g~~~~~d~~~~~lp~---~~~v~~~~D 192 (361)
T PF03283_consen 127 YGGTTLYFRGYRILRAVLDDLLSNGLPN--AKQVLLTGCSAGGLGAILHADYVRDRLPS---SVKVKCLSD 192 (361)
T ss_pred cCCceeEeecHHHHHHHHHHHHHhcCcc--cceEEEeccChHHHHHHHHHHHHHHHhcc---CceEEEecc
Confidence 11 112244455556656655 554 46799999999998888777777665432 234555533
No 137
>PRK11460 putative hydrolase; Provisional
Probab=69.53 E-value=6.6 Score=36.79 Aligned_cols=53 Identities=15% Similarity=0.063 Sum_probs=40.6
Q ss_pred cCceEEEEeccCCCCCChhhHHHHHHhcccccccccccCCceeeEeCCCceeeeEEEEEcCeEEEEEcCCcccccccCCh
Q 012900 364 KGVNVTVYNGQLDVICSTKGTEAWIEKLKWDGLQKFLSTERTPLFCGNDKITKGFKKSYKNLHFYWILGAGHFKNYCDTW 443 (454)
Q Consensus 364 ~~irVLiy~Gd~D~i~n~~G~~~~i~~L~W~g~~~f~~a~~~~w~~~~~~~~~G~~k~~~nLtf~~V~~AGHmvP~dqP~ 443 (454)
.+.+|++.+|..|.++|..-.++..+.|+=. | .+.++.++.++||.+..+.-+
T Consensus 147 ~~~pvli~hG~~D~vvp~~~~~~~~~~L~~~----------------------g-----~~~~~~~~~~~gH~i~~~~~~ 199 (232)
T PRK11460 147 TATTIHLIHGGEDPVIDVAHAVAAQEALISL----------------------G-----GDVTLDIVEDLGHAIDPRLMQ 199 (232)
T ss_pred CCCcEEEEecCCCCccCHHHHHHHHHHHHHC----------------------C-----CCeEEEEECCCCCCCCHHHHH
Confidence 3589999999999999999988888887610 0 246677789999998754333
No 138
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=68.89 E-value=11 Score=38.75 Aligned_cols=21 Identities=29% Similarity=0.442 Sum_probs=17.1
Q ss_pred CCEEEEecccCcchhHHHHHH
Q 012900 158 SPLFIVAESYGGKFAATLGLA 178 (454)
Q Consensus 158 ~~~yi~GESYgG~yvP~lA~~ 178 (454)
....|+|.|+||.-+-.+|.+
T Consensus 288 ~~~~IaG~S~GGl~AL~~al~ 308 (411)
T PRK10439 288 DRTVVAGQSFGGLAALYAGLH 308 (411)
T ss_pred cceEEEEEChHHHHHHHHHHh
Confidence 458999999999988777643
No 139
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=68.65 E-value=6.2 Score=35.85 Aligned_cols=65 Identities=23% Similarity=0.332 Sum_probs=44.6
Q ss_pred HHHHHHHHHHHHHHHHhc--cccCCCCEEEEecccCcchhHHHHHHHHHHHHcCCceeeeeeeEecccCCCc
Q 012900 135 VEAANDLTTLLMELFNKN--EILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWISP 204 (454)
Q Consensus 135 ~~~A~d~~~fL~~F~~~f--P~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkGi~iGNg~~~p 204 (454)
.+..+|+.++++-..+.- -++...+++|+|+|=||+.+-.++..+.+. +. ..++++++-.|++|.
T Consensus 46 p~~~~D~~~a~~~l~~~~~~~~~d~~~i~l~G~SAGg~la~~~~~~~~~~---~~--~~~~~~~~~~p~~d~ 112 (211)
T PF07859_consen 46 PAALEDVKAAYRWLLKNADKLGIDPERIVLIGDSAGGHLALSLALRARDR---GL--PKPKGIILISPWTDL 112 (211)
T ss_dssp THHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHT---TT--CHESEEEEESCHSST
T ss_pred cccccccccceeeeccccccccccccceEEeecccccchhhhhhhhhhhh---cc--cchhhhhcccccccc
Confidence 355566666665444430 124457899999999999999999776542 11 238999998887764
No 140
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=67.30 E-value=8.3 Score=41.00 Aligned_cols=84 Identities=8% Similarity=0.011 Sum_probs=49.8
Q ss_pred ccceeecCCcccccCCccCCCCcccchHHHHHHHHHHHHHHHHhccccCCCCEEEEecccCcchhHHHHHHHHHHHHcCC
Q 012900 108 ADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGK 187 (454)
Q Consensus 108 anvLfiDqPvGtGfSy~~~~~~~~~~~~~~A~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~ 187 (454)
..++-||-+ |-|.|.... .-++-+.+.+.++++.+.+.. ...++++.|.|.||..+...+..+.....
T Consensus 221 f~V~~iDwr-gpg~s~~~~-----~~ddY~~~~i~~al~~v~~~~---g~~kv~lvG~cmGGtl~a~ala~~aa~~~--- 288 (532)
T TIGR01838 221 HTVFVISWR-NPDASQADK-----TFDDYIRDGVIAALEVVEAIT---GEKQVNCVGYCIGGTLLSTALAYLAARGD--- 288 (532)
T ss_pred cEEEEEECC-CCCcccccC-----ChhhhHHHHHHHHHHHHHHhc---CCCCeEEEEECcCcHHHHHHHHHHHHhCC---
Confidence 467778876 777764321 112333345666666665433 35789999999999987653322222110
Q ss_pred ceeeeeeeEecccCCCc
Q 012900 188 LKLKLGGVALGDSWISP 204 (454)
Q Consensus 188 ~~inLkGi~iGNg~~~p 204 (454)
.-.++++++-+..+|.
T Consensus 289 -~~rv~slvll~t~~Df 304 (532)
T TIGR01838 289 -DKRIKSATFFTTLLDF 304 (532)
T ss_pred -CCccceEEEEecCcCC
Confidence 1147888877766663
No 141
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=67.06 E-value=18 Score=33.93 Aligned_cols=87 Identities=14% Similarity=0.114 Sum_probs=55.5
Q ss_pred cceeecCCcccccCCccCCCCcccchHHHHHHHHHHHHHHHHhccccCCCCEEEEecccCcchhHHHHHHHHHHHHcCCc
Q 012900 109 DLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKL 188 (454)
Q Consensus 109 nvLfiDqPvGtGfSy~~~~~~~~~~~~~~A~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~ 188 (454)
+...|+-|.+.+.=.+-..-.+..+..+.++.+.+.++.+.. ..+++.|+|.|-|+.-+-....++.+.-...
T Consensus 4 ~~~~V~YPa~f~P~~g~~~~t~~~Sv~~G~~~L~~ai~~~~~-----~~~~vvV~GySQGA~Va~~~~~~l~~~~~~~-- 76 (225)
T PF08237_consen 4 NVVAVDYPASFWPVTGIGSPTYDESVAEGVANLDAAIRAAIA-----AGGPVVVFGYSQGAVVASNVLRRLAADGDPP-- 76 (225)
T ss_pred ceEEecCCchhcCcCCCCCCccchHHHHHHHHHHHHHHhhcc-----CCCCEEEEEECHHHHHHHHHHHHHHhcCCCC--
Confidence 344566665433211111112456778888889899887764 5689999999999887766666665421111
Q ss_pred eeeeeeeEecccCC
Q 012900 189 KLKLGGVALGDSWI 202 (454)
Q Consensus 189 ~inLkGi~iGNg~~ 202 (454)
.=+++-+.+||+--
T Consensus 77 ~~~l~fVl~gnP~r 90 (225)
T PF08237_consen 77 PDDLSFVLIGNPRR 90 (225)
T ss_pred cCceEEEEecCCCC
Confidence 13788999998743
No 142
>PLN02719 triacylglycerol lipase
Probab=66.85 E-value=9.4 Score=39.91 Aligned_cols=72 Identities=11% Similarity=0.144 Sum_probs=50.8
Q ss_pred chHHHHHHHHHHHHHHHHhccccC--CCCEEEEecccCcchhHHHHHHHHHHH--Hc-CCceeeeeeeEecccCCCc
Q 012900 133 NDVEAANDLTTLLMELFNKNEILQ--KSPLFIVAESYGGKFAATLGLAAVKAI--EA-GKLKLKLGGVALGDSWISP 204 (454)
Q Consensus 133 ~~~~~A~d~~~fL~~F~~~fP~~~--~~~~yi~GESYgG~yvP~lA~~i~~~~--~~-~~~~inLkGi~iGNg~~~p 204 (454)
+...+.++++..+++..+.+|... ...++|+|+|-||-.+-..|..|.+.. +. ....+++.-+..|.|-+..
T Consensus 271 ~k~SaReQVl~eV~rL~~~Ypd~~ge~~sItVTGHSLGGALAtLaA~Dl~~~gln~~~~~~~~pVtvyTFGsPRVGN 347 (518)
T PLN02719 271 SKFSAREQVLTEVKRLVERYGDEEGEELSITVTGHSLGGALAVLSAYDVAEMGLNRTRKGKVIPVTAFTYGGPRVGN 347 (518)
T ss_pred cchhHHHHHHHHHHHHHHHCCcccCCcceEEEecCcHHHHHHHHHHHHHHHhcccccccccccceEEEEecCCCccC
Confidence 345678889999999999888653 457999999999999998888886531 10 0112345556667766654
No 143
>PLN02753 triacylglycerol lipase
Probab=66.78 E-value=18 Score=38.08 Aligned_cols=72 Identities=11% Similarity=0.110 Sum_probs=51.2
Q ss_pred chHHHHHHHHHHHHHHHHhccc--cCCCCEEEEecccCcchhHHHHHHHHHHH--H-cCCceeeeeeeEecccCCCc
Q 012900 133 NDVEAANDLTTLLMELFNKNEI--LQKSPLFIVAESYGGKFAATLGLAAVKAI--E-AGKLKLKLGGVALGDSWISP 204 (454)
Q Consensus 133 ~~~~~A~d~~~fL~~F~~~fP~--~~~~~~yi~GESYgG~yvP~lA~~i~~~~--~-~~~~~inLkGi~iGNg~~~p 204 (454)
+...+.++++..+++..+.+|. .....++|+|+|-||-.+-..|..|.+.. . .....+++.-+..|.|-+..
T Consensus 285 ~k~S~reQVl~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~Dla~~g~n~~~~~~~~pV~vyTFGsPRVGN 361 (531)
T PLN02753 285 AKFSAREQILTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAYDIAEMGLNRSKKGKVIPVTVLTYGGPRVGN 361 (531)
T ss_pred chhhHHHHHHHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHHHHHHhcccccccCccCceEEEEeCCCCccC
Confidence 4567889999999999988864 23468999999999999998888886521 1 01113455666777776654
No 144
>PLN02324 triacylglycerol lipase
Probab=66.43 E-value=18 Score=36.94 Aligned_cols=48 Identities=13% Similarity=0.104 Sum_probs=39.0
Q ss_pred chHHHHHHHHHHHHHHHHhccccCCCCEEEEecccCcchhHHHHHHHHH
Q 012900 133 NDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVK 181 (454)
Q Consensus 133 ~~~~~A~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~lA~~i~~ 181 (454)
+...+.+++...++++.+.+|.. ...++|+|+|-||-.+-..|..|.+
T Consensus 191 ~k~SareqVl~eV~~L~~~Yp~e-~~sItvTGHSLGGALAtLaA~dl~~ 238 (415)
T PLN02324 191 DTTSAQEQVQGELKRLLELYKNE-EISITFTGHSLGAVMSVLSAADLVY 238 (415)
T ss_pred chhHHHHHHHHHHHHHHHHCCCC-CceEEEecCcHHHHHHHHHHHHHHH
Confidence 34567888899999999888753 3479999999999998888888865
No 145
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=66.24 E-value=14 Score=43.85 Aligned_cols=101 Identities=14% Similarity=0.168 Sum_probs=64.3
Q ss_pred CEEEEEcCCCChhhhhhccccccCCCcccCCCCccchhccccceeecCCcccccCCccCCCCcccchHHHHHHHHHHHHH
Q 012900 68 PIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLKKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLME 147 (454)
Q Consensus 68 PlilWlnGGPGcSS~~~G~f~E~GP~~~~~~~n~~SW~~~anvLfiDqPvGtGfSy~~~~~~~~~~~~~~A~d~~~fL~~ 147 (454)
|-++.++|+.|.+.. +..+. ........++-+|.| |.|-+. ....+.++.|+++.+.++.
T Consensus 1069 ~~l~~lh~~~g~~~~-~~~l~-------------~~l~~~~~v~~~~~~-g~~~~~-----~~~~~l~~la~~~~~~i~~ 1128 (1296)
T PRK10252 1069 PTLFCFHPASGFAWQ-FSVLS-------------RYLDPQWSIYGIQSP-RPDGPM-----QTATSLDEVCEAHLATLLE 1128 (1296)
T ss_pred CCeEEecCCCCchHH-HHHHH-------------HhcCCCCcEEEEECC-CCCCCC-----CCCCCHHHHHHHHHHHHHh
Confidence 567888988887665 32111 011234677788888 655331 2245788888888877764
Q ss_pred HHHhccccCCCCEEEEecccCcchhHHHHHHHHHHHHcCCceeeeeeeEeccc
Q 012900 148 LFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDS 200 (454)
Q Consensus 148 F~~~fP~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkGi~iGNg 200 (454)
. .| ..+++|.|.|+||..+-.+|.++.++ + ..+..+++-++
T Consensus 1129 ~---~~---~~p~~l~G~S~Gg~vA~e~A~~l~~~---~---~~v~~l~l~~~ 1169 (1296)
T PRK10252 1129 Q---QP---HGPYHLLGYSLGGTLAQGIAARLRAR---G---EEVAFLGLLDT 1169 (1296)
T ss_pred h---CC---CCCEEEEEechhhHHHHHHHHHHHHc---C---CceeEEEEecC
Confidence 2 22 35899999999999888888766432 1 24555555443
No 146
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=65.90 E-value=80 Score=32.18 Aligned_cols=53 Identities=13% Similarity=0.049 Sum_probs=36.2
Q ss_pred cchHHHHHHHHHHHHHHHHhccccCCCCEE-EEecccCcchhHHHHHHHHHHHHcCCceeeeeeeEeccc
Q 012900 132 KNDVEAANDLTTLLMELFNKNEILQKSPLF-IVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDS 200 (454)
Q Consensus 132 ~~~~~~A~d~~~fL~~F~~~fP~~~~~~~y-i~GESYgG~yvP~lA~~i~~~~~~~~~~inLkGi~iGNg 200 (454)
.+.++.++++..+|+.+ .-++++ +.|.|+||.-+-.+|.+--+ .++++++.++
T Consensus 141 ~t~~d~~~~~~~ll~~l-------gi~~~~~vvG~SmGG~ial~~a~~~P~---------~v~~lv~ia~ 194 (389)
T PRK06765 141 VTILDFVRVQKELIKSL-------GIARLHAVMGPSMGGMQAQEWAVHYPH---------MVERMIGVIG 194 (389)
T ss_pred CcHHHHHHHHHHHHHHc-------CCCCceEEEEECHHHHHHHHHHHHChH---------hhheEEEEec
Confidence 56777777777777542 235665 99999999988888865433 3666666544
No 147
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=65.68 E-value=13 Score=36.97 Aligned_cols=53 Identities=17% Similarity=0.189 Sum_probs=39.5
Q ss_pred CceEEEEeccCCCCCChhhHHHHHHhcccccccccccCCceeeEeCCCceeeeEEEEEcCeEEEEEcCCcccccccC-Ch
Q 012900 365 GVNVTVYNGQLDVICSTKGTEAWIEKLKWDGLQKFLSTERTPLFCGNDKITKGFKKSYKNLHFYWILGAGHFKNYCD-TW 443 (454)
Q Consensus 365 ~irVLiy~Gd~D~i~n~~G~~~~i~~L~W~g~~~f~~a~~~~w~~~~~~~~~G~~k~~~nLtf~~V~~AGHmvP~dq-P~ 443 (454)
.+++|+.+|+.|.+++..+++.+.+++.- .+-++..+.+++|++..+. ++
T Consensus 270 ~~P~Lii~G~~D~vv~~~~~~~~~~~~~~-----------------------------~~~~l~~~~g~~H~i~~E~~~~ 320 (332)
T TIGR01607 270 DIPILFIHSKGDCVCSYEGTVSFYNKLSI-----------------------------SNKELHTLEDMDHVITIEPGNE 320 (332)
T ss_pred CCCEEEEEeCCCCccCHHHHHHHHHhccC-----------------------------CCcEEEEECCCCCCCccCCCHH
Confidence 58999999999999999888876665541 1223456889999999885 34
Q ss_pred hhh
Q 012900 444 SGK 446 (454)
Q Consensus 444 ~~~ 446 (454)
.++
T Consensus 321 ~v~ 323 (332)
T TIGR01607 321 EVL 323 (332)
T ss_pred HHH
Confidence 443
No 148
>PLN02761 lipase class 3 family protein
Probab=65.20 E-value=18 Score=38.00 Aligned_cols=72 Identities=8% Similarity=0.104 Sum_probs=49.9
Q ss_pred chHHHHHHHHHHHHHHHHhcccc-C--CCCEEEEecccCcchhHHHHHHHHHHHHc----CCceeeeeeeEecccCCCc
Q 012900 133 NDVEAANDLTTLLMELFNKNEIL-Q--KSPLFIVAESYGGKFAATLGLAAVKAIEA----GKLKLKLGGVALGDSWISP 204 (454)
Q Consensus 133 ~~~~~A~d~~~fL~~F~~~fP~~-~--~~~~yi~GESYgG~yvP~lA~~i~~~~~~----~~~~inLkGi~iGNg~~~p 204 (454)
+...+.++++..+++..+.+|.. + ...++|+|+|-||-.+-..|..|....-+ ....+++.-+..|.|-+..
T Consensus 266 ~k~SaR~qVl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA~DIa~~gln~~~~~~~~~PVtv~TFGsPRVGN 344 (527)
T PLN02761 266 SSFSAREQVLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSAYDIAELNLNHVPENNYKIPITVFSFSGPRVGN 344 (527)
T ss_pred cchhHHHHHHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHHHHHHHhccccccccccCCceEEEEcCCCCcCC
Confidence 34567888999999999888643 2 24599999999999988888887642110 1223456666777776654
No 149
>PLN02934 triacylglycerol lipase
Probab=64.33 E-value=17 Score=38.14 Aligned_cols=41 Identities=17% Similarity=0.251 Sum_probs=32.8
Q ss_pred HHHHHHHHHHHHHhccccCCCCEEEEecccCcchhHHHHHHHHH
Q 012900 138 ANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVK 181 (454)
Q Consensus 138 A~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~lA~~i~~ 181 (454)
-.++...|+++++.+|. .+++++|+|-||-.+-..|..+..
T Consensus 304 y~~v~~~lk~ll~~~p~---~kIvVTGHSLGGALAtLaA~~L~l 344 (515)
T PLN02934 304 YYAVRSKLKSLLKEHKN---AKFVVTGHSLGGALAILFPTVLVL 344 (515)
T ss_pred HHHHHHHHHHHHHHCCC---CeEEEeccccHHHHHHHHHHHHHH
Confidence 34577788888888887 479999999999988888766643
No 150
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=63.23 E-value=13 Score=35.63 Aligned_cols=49 Identities=14% Similarity=0.123 Sum_probs=37.7
Q ss_pred CceEEEEeccCCCCCChhhHHHHHHhcccccccccccCCceeeEeCCCceeeeEEEEEcCeEEEEEcCCcccccccCChh
Q 012900 365 GVNVTVYNGQLDVICSTKGTEAWIEKLKWDGLQKFLSTERTPLFCGNDKITKGFKKSYKNLHFYWILGAGHFKNYCDTWS 444 (454)
Q Consensus 365 ~irVLiy~Gd~D~i~n~~G~~~~i~~L~W~g~~~f~~a~~~~w~~~~~~~~~G~~k~~~nLtf~~V~~AGHmvP~dqP~~ 444 (454)
.+++++..|..|.++|..-.+++.+.+. + -..+++ ++||+.+..+|+.
T Consensus 211 ~vP~l~I~g~~D~~ip~~~~~~m~~~~~--~-----------------------------~~~~~l-~~gH~p~ls~P~~ 258 (273)
T PLN02211 211 KVPRVYIKTLHDHVVKPEQQEAMIKRWP--P-----------------------------SQVYEL-ESDHSPFFSTPFL 258 (273)
T ss_pred ccceEEEEeCCCCCCCHHHHHHHHHhCC--c-----------------------------cEEEEE-CCCCCccccCHHH
Confidence 5899999999999999877766665544 0 023456 4999999999986
Q ss_pred h
Q 012900 445 G 445 (454)
Q Consensus 445 ~ 445 (454)
.
T Consensus 259 ~ 259 (273)
T PLN02211 259 L 259 (273)
T ss_pred H
Confidence 5
No 151
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=62.92 E-value=15 Score=32.99 Aligned_cols=55 Identities=20% Similarity=0.180 Sum_probs=37.7
Q ss_pred HhhcCceEEEEeccCCCCCChhhHHHHHHhcccccccccccCCceeeEeCCCceeeeEEEEEcCeEEEEEcCCccccccc
Q 012900 361 LLAKGVNVTVYNGQLDVICSTKGTEAWIEKLKWDGLQKFLSTERTPLFCGNDKITKGFKKSYKNLHFYWILGAGHFKNYC 440 (454)
Q Consensus 361 LL~~~irVLiy~Gd~D~i~n~~G~~~~i~~L~W~g~~~f~~a~~~~w~~~~~~~~~G~~k~~~nLtf~~V~~AGHmvP~d 440 (454)
+.+...++|+..|+.|.+.+....+.+...+.. ...++++.++||+...+
T Consensus 217 ~~~~~~P~l~i~g~~d~~~~~~~~~~~~~~~~~------------------------------~~~~~~~~~~gH~~~~~ 266 (282)
T COG0596 217 LARITVPTLIIHGEDDPVVPAELARRLAAALPN------------------------------DARLVVIPGAGHFPHLE 266 (282)
T ss_pred hccCCCCeEEEecCCCCcCCHHHHHHHHhhCCC------------------------------CceEEEeCCCCCcchhh
Confidence 334469999999999966654432222222221 35567799999999999
Q ss_pred CChhh
Q 012900 441 DTWSG 445 (454)
Q Consensus 441 qP~~~ 445 (454)
+|+..
T Consensus 267 ~p~~~ 271 (282)
T COG0596 267 APEAF 271 (282)
T ss_pred cHHHH
Confidence 99854
No 152
>PRK10566 esterase; Provisional
Probab=62.84 E-value=12 Score=34.84 Aligned_cols=49 Identities=22% Similarity=0.314 Sum_probs=38.0
Q ss_pred CceEEEEeccCCCCCChhhHHHHHHhcccccccccccCCceeeEeCCCceeeeEEEEEcCeEEEEEcCCccccc
Q 012900 365 GVNVTVYNGQLDVICSTKGTEAWIEKLKWDGLQKFLSTERTPLFCGNDKITKGFKKSYKNLHFYWILGAGHFKN 438 (454)
Q Consensus 365 ~irVLiy~Gd~D~i~n~~G~~~~i~~L~W~g~~~f~~a~~~~w~~~~~~~~~G~~k~~~nLtf~~V~~AGHmvP 438 (454)
..+||+.+|..|.++|...+++..+.++=.+. ..+++++++.++||...
T Consensus 186 ~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~-------------------------~~~~~~~~~~~~~H~~~ 234 (249)
T PRK10566 186 DRPLLLWHGLADDVVPAAESLRLQQALRERGL-------------------------DKNLTCLWEPGVRHRIT 234 (249)
T ss_pred CCCEEEEEcCCCCcCCHHHHHHHHHHHHhcCC-------------------------CcceEEEecCCCCCccC
Confidence 36999999999999999988888777751110 02578888999999874
No 153
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=62.52 E-value=16 Score=37.99 Aligned_cols=42 Identities=17% Similarity=0.213 Sum_probs=32.3
Q ss_pred hHHHHHHHHHHHHHHHHhccccCCCCEEEEecccCcchhHHHHHH
Q 012900 134 DVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLA 178 (454)
Q Consensus 134 ~~~~A~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~lA~~ 178 (454)
.++..+++-+.++++++..+ .+++.|.|+|.||..+-.++..
T Consensus 141 ~~~~~~~Lk~lIe~~~~~~g---~~kV~LVGHSMGGlva~~fl~~ 182 (440)
T PLN02733 141 LPETMDGLKKKLETVYKASG---GKKVNIISHSMGGLLVKCFMSL 182 (440)
T ss_pred HHHHHHHHHHHHHHHHHHcC---CCCEEEEEECHhHHHHHHHHHH
Confidence 34566778888888877544 4799999999999888777643
No 154
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=62.29 E-value=14 Score=35.98 Aligned_cols=27 Identities=15% Similarity=0.353 Sum_probs=21.9
Q ss_pred CceEEEEeccCCCCCChhhHHHHHHhc
Q 012900 365 GVNVTVYNGQLDVICSTKGTEAWIEKL 391 (454)
Q Consensus 365 ~irVLiy~Gd~D~i~n~~G~~~~i~~L 391 (454)
.+++||.+|+.|.+||....+.+.+.+
T Consensus 248 ~~P~lii~g~~D~~~p~~~~~~~~~~~ 274 (306)
T TIGR01249 248 NIPTYIVHGRYDLCCPLQSAWALHKAF 274 (306)
T ss_pred CCCeEEEecCCCCCCCHHHHHHHHHhC
Confidence 489999999999999987766555543
No 155
>PRK14567 triosephosphate isomerase; Provisional
Probab=62.20 E-value=19 Score=34.26 Aligned_cols=62 Identities=18% Similarity=0.289 Sum_probs=45.4
Q ss_pred HHHHHHHHHHHHHHHHhccccCCCCEEEEecccCcchhHHHHHHHHHHHHcCCceeeeeeeEecccCCCchh
Q 012900 135 VEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWISPED 206 (454)
Q Consensus 135 ~~~A~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkGi~iGNg~~~p~~ 206 (454)
.+.+++++.++++++..+-+-....+-|. |||.--|.-+..|++. -++.|+.||.+-++|..
T Consensus 178 ~e~i~~~~~~IR~~l~~~~~~~a~~v~Il---YGGSV~~~N~~~l~~~-------~diDG~LVGgasL~~~~ 239 (253)
T PRK14567 178 LEQIQETHQFIRSLLAKVDERLAKNIKIV---YGGSLKAENAKDILSL-------PDVDGGLIGGASLKAAE 239 (253)
T ss_pred HHHHHHHHHHHHHHHHhhcccccccceEE---EcCcCCHHHHHHHHcC-------CCCCEEEeehhhhcHHH
Confidence 46677799999999876422112334444 9999999999888752 26999999999998754
No 156
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=62.13 E-value=14 Score=33.94 Aligned_cols=72 Identities=17% Similarity=0.128 Sum_probs=50.6
Q ss_pred ccccCCccCCCCcccchHHHHHHHHHHHHHHHHhccccCCCCEEEEecccCcchhHHHHHHHHHHHHcCCceeeeeeeEe
Q 012900 118 GTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVAL 197 (454)
Q Consensus 118 GtGfSy~~~~~~~~~~~~~~A~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkGi~i 197 (454)
-|||-++.. ..+.+++..++.++++--|+.+|.- +.+-+.|+|=|.|.+-....++. . -.+.|+++
T Consensus 102 svgY~l~~q----~htL~qt~~~~~~gv~filk~~~n~--k~l~~gGHSaGAHLa~qav~R~r----~----prI~gl~l 167 (270)
T KOG4627|consen 102 SVGYNLCPQ----VHTLEQTMTQFTHGVNFILKYTENT--KVLTFGGHSAGAHLAAQAVMRQR----S----PRIWGLIL 167 (270)
T ss_pred EeccCcCcc----cccHHHHHHHHHHHHHHHHHhcccc--eeEEEcccchHHHHHHHHHHHhc----C----chHHHHHH
Confidence 566666643 4578999999999998878878764 34999999999887666555542 1 24667766
Q ss_pred cccCCC
Q 012900 198 GDSWIS 203 (454)
Q Consensus 198 GNg~~~ 203 (454)
-.|+-+
T Consensus 168 ~~GvY~ 173 (270)
T KOG4627|consen 168 LCGVYD 173 (270)
T ss_pred HhhHhh
Confidence 555544
No 157
>PRK10985 putative hydrolase; Provisional
Probab=61.75 E-value=14 Score=36.37 Aligned_cols=46 Identities=13% Similarity=0.047 Sum_probs=33.4
Q ss_pred CceEEEEeccCCCCCChhhHHHHHHhcccccccccccCCceeeEeCCCceeeeEEEEEcCeEEEEEcCCcccccccC
Q 012900 365 GVNVTVYNGQLDVICSTKGTEAWIEKLKWDGLQKFLSTERTPLFCGNDKITKGFKKSYKNLHFYWILGAGHFKNYCD 441 (454)
Q Consensus 365 ~irVLiy~Gd~D~i~n~~G~~~~i~~L~W~g~~~f~~a~~~~w~~~~~~~~~G~~k~~~nLtf~~V~~AGHmvP~dq 441 (454)
.+++|+.+|+.|.+++....+.. .++ ..+..++++.++||+.+.+.
T Consensus 255 ~~P~lii~g~~D~~~~~~~~~~~-~~~------------------------------~~~~~~~~~~~~GH~~~~~g 300 (324)
T PRK10985 255 RKPTLIIHAKDDPFMTHEVIPKP-ESL------------------------------PPNVEYQLTEHGGHVGFVGG 300 (324)
T ss_pred CCCEEEEecCCCCCCChhhChHH-HHh------------------------------CCCeEEEECCCCCceeeCCC
Confidence 68999999999999975433221 111 12567788999999999876
No 158
>PRK14566 triosephosphate isomerase; Provisional
Probab=61.48 E-value=19 Score=34.51 Aligned_cols=62 Identities=13% Similarity=0.265 Sum_probs=45.5
Q ss_pred HHHHHHHHHHHHHHHHhccccCCCCEEEEecccCcchhHHHHHHHHHHHHcCCceeeeeeeEecccCCCchh
Q 012900 135 VEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWISPED 206 (454)
Q Consensus 135 ~~~A~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkGi~iGNg~~~p~~ 206 (454)
.+-|++++.|+++++...-......+=|. |||.--|.-+..|... -++.|+.||..-++|..
T Consensus 188 ~e~a~~v~~~IR~~l~~~~~~~a~~~rIl---YGGSV~~~N~~~l~~~-------~dIDG~LVGgASL~~~~ 249 (260)
T PRK14566 188 PEQAQEVHAFIRKRLSEVSPFIGENIRIL---YGGSVTPSNAADLFAQ-------PDVDGGLIGGASLNSTE 249 (260)
T ss_pred HHHHHHHHHHHHHHHHhcCccccccceEE---ecCCCCHhHHHHHhcC-------CCCCeEEechHhcCHHH
Confidence 34567799999999865421112334444 9999999999988752 37999999999998754
No 159
>PF10081 Abhydrolase_9: Alpha/beta-hydrolase family; InterPro: IPR012037 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=61.10 E-value=16 Score=35.23 Aligned_cols=38 Identities=21% Similarity=0.232 Sum_probs=30.0
Q ss_pred chHHHHHHHHHHHHHHHHhccccCCCCEEEEecccCcc
Q 012900 133 NDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGK 170 (454)
Q Consensus 133 ~~~~~A~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~ 170 (454)
.-.++++.+++.+..-....|+=..=++|++|||-|..
T Consensus 84 ~a~~a~~aL~~aV~~~~~~lP~~~RPkL~l~GeSLGa~ 121 (289)
T PF10081_consen 84 AAREAARALFEAVYARWSTLPEDRRPKLYLYGESLGAY 121 (289)
T ss_pred hHHHHHHHHHHHHHHHHHhCCcccCCeEEEeccCcccc
Confidence 35778888889888888888875444599999998744
No 160
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=60.02 E-value=45 Score=32.51 Aligned_cols=45 Identities=24% Similarity=0.260 Sum_probs=34.7
Q ss_pred CCCEEEEecccCcchhHHHHHHHHHHHHcCCceeeeeeeEecccCCCchh
Q 012900 157 KSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWISPED 206 (454)
Q Consensus 157 ~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkGi~iGNg~~~p~~ 206 (454)
.+.+.|+|+|=||+.+-.++....+. + ....++.++.-|++|...
T Consensus 151 p~~i~v~GdSAGG~La~~~a~~~~~~---~--~~~p~~~~li~P~~d~~~ 195 (312)
T COG0657 151 PSRIAVAGDSAGGHLALALALAARDR---G--LPLPAAQVLISPLLDLTS 195 (312)
T ss_pred ccceEEEecCcccHHHHHHHHHHHhc---C--CCCceEEEEEecccCCcc
Confidence 57899999999999999999877543 1 235677888788887654
No 161
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=58.95 E-value=15 Score=33.79 Aligned_cols=48 Identities=23% Similarity=0.183 Sum_probs=33.9
Q ss_pred CceEEEEeccCCCCCChhhHHHHHHhcccccccccccCCceeeEeCCCceeeeEEEEEcCeEEEEEcCCcccccc
Q 012900 365 GVNVTVYNGQLDVICSTKGTEAWIEKLKWDGLQKFLSTERTPLFCGNDKITKGFKKSYKNLHFYWILGAGHFKNY 439 (454)
Q Consensus 365 ~irVLiy~Gd~D~i~n~~G~~~~i~~L~W~g~~~f~~a~~~~w~~~~~~~~~G~~k~~~nLtf~~V~~AGHmvP~ 439 (454)
+.+|++.+|+.|.++|....+...+.|+= .+ .+++|.+..+.||-++.
T Consensus 155 ~~pi~~~hG~~D~vvp~~~~~~~~~~L~~------------------~~---------~~v~~~~~~g~gH~i~~ 202 (216)
T PF02230_consen 155 KTPILIIHGDEDPVVPFEWAEKTAEFLKA------------------AG---------ANVEFHEYPGGGHEISP 202 (216)
T ss_dssp TS-EEEEEETT-SSSTHHHHHHHHHHHHC------------------TT----------GEEEEEETT-SSS--H
T ss_pred CCcEEEEecCCCCcccHHHHHHHHHHHHh------------------cC---------CCEEEEEcCCCCCCCCH
Confidence 58999999999999999888877777761 11 15788888999998874
No 162
>PRK05855 short chain dehydrogenase; Validated
Probab=58.89 E-value=9 Score=40.73 Aligned_cols=49 Identities=16% Similarity=-0.016 Sum_probs=32.9
Q ss_pred CceEEEEeccCCCCCChhhHHHHHHhcccccccccccCCceeeEeCCCceeeeEEEEEcCeEEEEEcCCcccccccCChh
Q 012900 365 GVNVTVYNGQLDVICSTKGTEAWIEKLKWDGLQKFLSTERTPLFCGNDKITKGFKKSYKNLHFYWILGAGHFKNYCDTWS 444 (454)
Q Consensus 365 ~irVLiy~Gd~D~i~n~~G~~~~i~~L~W~g~~~f~~a~~~~w~~~~~~~~~G~~k~~~nLtf~~V~~AGHmvP~dqP~~ 444 (454)
.+++||.+|+.|.++|....+.+.+.+ .+..++++ ++||+++.+.|+.
T Consensus 233 ~~P~lii~G~~D~~v~~~~~~~~~~~~-------------------------------~~~~~~~~-~~gH~~~~e~p~~ 280 (582)
T PRK05855 233 DVPVQLIVPTGDPYVRPALYDDLSRWV-------------------------------PRLWRREI-KAGHWLPMSHPQV 280 (582)
T ss_pred cCceEEEEeCCCcccCHHHhccccccC-------------------------------CcceEEEc-cCCCcchhhChhH
Confidence 589999999999999854432111000 12334445 5899999999985
Q ss_pred h
Q 012900 445 G 445 (454)
Q Consensus 445 ~ 445 (454)
.
T Consensus 281 ~ 281 (582)
T PRK05855 281 L 281 (582)
T ss_pred H
Confidence 4
No 163
>KOG3079 consensus Uridylate kinase/adenylate kinase [Nucleotide transport and metabolism]
Probab=55.53 E-value=7.3 Score=35.12 Aligned_cols=15 Identities=40% Similarity=0.895 Sum_probs=12.8
Q ss_pred CCCEEEEEcCCCChh
Q 012900 66 PWPIILWLQGGPGAS 80 (454)
Q Consensus 66 ~~PlilWlnGGPGcS 80 (454)
+.|-|||+=|||||-
T Consensus 6 ~~~~IifVlGGPGsg 20 (195)
T KOG3079|consen 6 DKPPIIFVLGGPGSG 20 (195)
T ss_pred cCCCEEEEEcCCCCC
Confidence 349999999999984
No 164
>PLN02408 phospholipase A1
Probab=55.00 E-value=21 Score=35.99 Aligned_cols=46 Identities=13% Similarity=0.057 Sum_probs=37.8
Q ss_pred HHHHHHHHHHHHHHHHhccccCCCCEEEEecccCcchhHHHHHHHHH
Q 012900 135 VEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVK 181 (454)
Q Consensus 135 ~~~A~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~lA~~i~~ 181 (454)
..+.+++.+-++++.+.+|.. ...++|+|+|-||-.+-..|..|.+
T Consensus 178 ~s~r~qVl~eI~~ll~~y~~~-~~sI~vTGHSLGGALAtLaA~dl~~ 223 (365)
T PLN02408 178 PSLQEMVREEIARLLQSYGDE-PLSLTITGHSLGAALATLTAYDIKT 223 (365)
T ss_pred hhHHHHHHHHHHHHHHhcCCC-CceEEEeccchHHHHHHHHHHHHHH
Confidence 356788888999999888864 3469999999999998888887764
No 165
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=54.95 E-value=17 Score=44.37 Aligned_cols=65 Identities=12% Similarity=0.068 Sum_probs=40.2
Q ss_pred hcCceEEEEeccCCCCCChhhHHHHHHhcccccccccccCCceeeEeCCCceeeeEEEEEcCeEEEEEcCCcccccccCC
Q 012900 363 AKGVNVTVYNGQLDVICSTKGTEAWIEKLKWDGLQKFLSTERTPLFCGNDKITKGFKKSYKNLHFYWILGAGHFKNYCDT 442 (454)
Q Consensus 363 ~~~irVLiy~Gd~D~i~n~~G~~~~i~~L~W~g~~~f~~a~~~~w~~~~~~~~~G~~k~~~nLtf~~V~~AGHmvP~dqP 442 (454)
+-..++||..|+.|.+++ .-.++..+.+. . .. +. ..+ ...+...+++|.+|||+++.++|
T Consensus 1566 ~I~~PtLlI~Ge~D~~~~-~~a~~~~~~i~--~--a~------~~---~~~------~~~~~a~lvvI~~aGH~~~lE~P 1625 (1655)
T PLN02980 1566 QCDTPLLLVVGEKDVKFK-QIAQKMYREIG--K--SK------ES---GND------KGKEIIEIVEIPNCGHAVHLENP 1625 (1655)
T ss_pred hCCCCEEEEEECCCCccH-HHHHHHHHHcc--c--cc------cc---ccc------ccccceEEEEECCCCCchHHHCH
Confidence 336899999999999875 22333333333 0 00 00 000 00123578999999999999999
Q ss_pred hhhhh
Q 012900 443 WSGKR 447 (454)
Q Consensus 443 ~~~~~ 447 (454)
+...+
T Consensus 1626 e~f~~ 1630 (1655)
T PLN02980 1626 LPVIR 1630 (1655)
T ss_pred HHHHH
Confidence 97643
No 166
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=54.49 E-value=37 Score=35.41 Aligned_cols=32 Identities=16% Similarity=0.023 Sum_probs=21.1
Q ss_pred HHHHHHHHhccccCCCCEEEEecccCcchhHHH
Q 012900 143 TLLMELFNKNEILQKSPLFIVAESYGGKFAATL 175 (454)
Q Consensus 143 ~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~l 175 (454)
+.+++..+.|-.= ..++-|+|||=|++-|-.+
T Consensus 166 kWV~~NIe~FGGD-p~NVTl~GeSAGa~si~~L 197 (491)
T COG2272 166 KWVRDNIEAFGGD-PQNVTLFGESAGAASILTL 197 (491)
T ss_pred HHHHHHHHHhCCC-ccceEEeeccchHHHHHHh
Confidence 4555555555331 3579999999998866554
No 167
>PLN00413 triacylglycerol lipase
Probab=54.21 E-value=26 Score=36.38 Aligned_cols=39 Identities=23% Similarity=0.400 Sum_probs=31.5
Q ss_pred HHHHHHHHHHHHhccccCCCCEEEEecccCcchhHHHHHHHH
Q 012900 139 NDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAV 180 (454)
Q Consensus 139 ~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~lA~~i~ 180 (454)
.++...|+++++.+|+ .+++|+|+|-||..+-..|..+.
T Consensus 268 y~i~~~Lk~ll~~~p~---~kliVTGHSLGGALAtLaA~~L~ 306 (479)
T PLN00413 268 YTILRHLKEIFDQNPT---SKFILSGHSLGGALAILFTAVLI 306 (479)
T ss_pred HHHHHHHHHHHHHCCC---CeEEEEecCHHHHHHHHHHHHHH
Confidence 3567778888887776 47999999999999888887664
No 168
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=53.46 E-value=36 Score=31.82 Aligned_cols=49 Identities=18% Similarity=0.230 Sum_probs=33.1
Q ss_pred HHHHHHHHHhccccCCCCEEEEecccCcchhHHHHHHHHHHHHcCCceeeeeeeEecc
Q 012900 142 TTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGD 199 (454)
Q Consensus 142 ~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkGi~iGN 199 (454)
.+++++..+.+|+ +++|+|+|=||..+-+.|..+.+..+. .++.+..-|
T Consensus 72 ~~yl~~~~~~~~~----~i~v~GHSkGGnLA~yaa~~~~~~~~~-----rI~~vy~fD 120 (224)
T PF11187_consen 72 LAYLKKIAKKYPG----KIYVTGHSKGGNLAQYAAANCDDEIQD-----RISKVYSFD 120 (224)
T ss_pred HHHHHHHHHhCCC----CEEEEEechhhHHHHHHHHHccHHHhh-----heeEEEEee
Confidence 3566666666654 699999999999988888775443221 355555534
No 169
>PRK13604 luxD acyl transferase; Provisional
Probab=53.39 E-value=31 Score=33.93 Aligned_cols=28 Identities=4% Similarity=0.173 Sum_probs=25.5
Q ss_pred CceEEEEeccCCCCCChhhHHHHHHhcc
Q 012900 365 GVNVTVYNGQLDVICSTKGTEAWIEKLK 392 (454)
Q Consensus 365 ~irVLiy~Gd~D~i~n~~G~~~~i~~L~ 392 (454)
.++||+++|+.|..||..+.+...++++
T Consensus 202 ~~PvLiIHG~~D~lVp~~~s~~l~e~~~ 229 (307)
T PRK13604 202 DIPFIAFTANNDSWVKQSEVIDLLDSIR 229 (307)
T ss_pred CCCEEEEEcCCCCccCHHHHHHHHHHhc
Confidence 4899999999999999999998888765
No 170
>COG0400 Predicted esterase [General function prediction only]
Probab=53.27 E-value=20 Score=33.11 Aligned_cols=29 Identities=24% Similarity=0.266 Sum_probs=26.2
Q ss_pred cCceEEEEeccCCCCCChhhHHHHHHhcc
Q 012900 364 KGVNVTVYNGQLDVICSTKGTEAWIEKLK 392 (454)
Q Consensus 364 ~~irVLiy~Gd~D~i~n~~G~~~~i~~L~ 392 (454)
++.||++.+|..|.+||..-+++..+.|.
T Consensus 145 ~~~pill~hG~~Dpvvp~~~~~~l~~~l~ 173 (207)
T COG0400 145 AGTPILLSHGTEDPVVPLALAEALAEYLT 173 (207)
T ss_pred CCCeEEEeccCcCCccCHHHHHHHHHHHH
Confidence 46999999999999999999988888777
No 171
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=53.14 E-value=40 Score=36.35 Aligned_cols=136 Identities=18% Similarity=0.221 Sum_probs=73.3
Q ss_pred CceEEEEEEEcCCCCCCCCCCCCEEEEEcCCCChhhhhhccccccCCCcccCCCCccchhccc----------cceeecC
Q 012900 46 KAHMFWWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLKKA----------DLLFVDN 115 (454)
Q Consensus 46 ~~~lfywf~es~~~~~~p~~~~PlilWlnGGPGcSS~~~G~f~E~GP~~~~~~~n~~SW~~~a----------nvLfiDq 115 (454)
++-+.|-.+.++.. .+|-+..|++|.+-||||.- +..|.++|.+.. =|++||.
T Consensus 622 tg~~lYgmiyKPhn-~~pgkkYptvl~VYGGP~VQ----------------lVnnsfkgi~ylR~~~LaslGy~Vv~IDn 684 (867)
T KOG2281|consen 622 TGLTLYGMIYKPHN-FQPGKKYPTVLNVYGGPGVQ----------------LVNNSFKGIQYLRFCRLASLGYVVVFIDN 684 (867)
T ss_pred CCcEEEEEEEcccc-CCCCCCCceEEEEcCCCceE----------------EeeccccceehhhhhhhhhcceEEEEEcC
Confidence 34566666665532 45666679999999999974 344777777643 2588995
Q ss_pred Ccccc---cCCccCCCCcccchHHHHHHHHHHHHHHHHhccccCC-CCEEEEecccCcchhHHHHHHHHHHHHcCCceee
Q 012900 116 PVGTG---YSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQK-SPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLK 191 (454)
Q Consensus 116 PvGtG---fSy~~~~~~~~~~~~~~A~d~~~fL~~F~~~fP~~~~-~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~in 191 (454)
- |+- .-+-..-. ......+ ++|=++-||-.-++.- |.. ..+-|-|-||||....+. |.++ .+ -
T Consensus 685 R-GS~hRGlkFE~~ik-~kmGqVE-~eDQVeglq~Laeq~g-fidmdrV~vhGWSYGGYLSlm~---L~~~-----P~-I 751 (867)
T KOG2281|consen 685 R-GSAHRGLKFESHIK-KKMGQVE-VEDQVEGLQMLAEQTG-FIDMDRVGVHGWSYGGYLSLMG---LAQY-----PN-I 751 (867)
T ss_pred C-CccccchhhHHHHh-hccCeee-ehhhHHHHHHHHHhcC-cccchheeEeccccccHHHHHH---hhcC-----cc-e
Confidence 4 331 11100000 0001111 1222344443333332 333 458899999999754432 2221 11 2
Q ss_pred eeeeEecccCCCchhhhhhc
Q 012900 192 LGGVALGDSWISPEDFVFSW 211 (454)
Q Consensus 192 LkGi~iGNg~~~p~~~~~~~ 211 (454)
++-.+-|.|.++.......|
T Consensus 752 frvAIAGapVT~W~~YDTgY 771 (867)
T KOG2281|consen 752 FRVAIAGAPVTDWRLYDTGY 771 (867)
T ss_pred eeEEeccCcceeeeeecccc
Confidence 66677788888876443333
No 172
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=52.94 E-value=19 Score=35.08 Aligned_cols=48 Identities=23% Similarity=0.394 Sum_probs=38.4
Q ss_pred CceEEEEeccCCCCCChhhHHHHHHhcccccccccccCCceeeEeCCCceeeeEEEEEcCeEEEEEcCCccccc
Q 012900 365 GVNVTVYNGQLDVICSTKGTEAWIEKLKWDGLQKFLSTERTPLFCGNDKITKGFKKSYKNLHFYWILGAGHFKN 438 (454)
Q Consensus 365 ~irVLiy~Gd~D~i~n~~G~~~~i~~L~W~g~~~f~~a~~~~w~~~~~~~~~G~~k~~~nLtf~~V~~AGHmvP 438 (454)
+.+|+||+|..|-++|+..++..++++-=. +. .+++|.++.+++|+..
T Consensus 219 ~~Pv~i~~g~~D~vvP~~~~~~l~~~~c~~----------------G~----------a~V~~~~~~~~~H~~~ 266 (290)
T PF03583_consen 219 TVPVLIYQGTADEVVPPADTDALVAKWCAA----------------GG----------ADVEYVRYPGGGHLGA 266 (290)
T ss_pred CCCEEEEecCCCCCCChHHHHHHHHHHHHc----------------CC----------CCEEEEecCCCChhhh
Confidence 589999999999999999999888876511 10 1577888899999865
No 173
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=52.15 E-value=33 Score=34.10 Aligned_cols=57 Identities=16% Similarity=0.201 Sum_probs=44.8
Q ss_pred CCCcccchHHHHHHHHHHHHHHHHhccccCCCCEEEEecccCcchhHHHHHHHHHHHHcCCceeeeeeeEe
Q 012900 127 NSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVAL 197 (454)
Q Consensus 127 ~~~~~~~~~~~A~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkGi~i 197 (454)
+..++.++..+++.+.+|-.+=+ .|+..++.|.|-|-||.-+...|+- .-++|++++
T Consensus 284 G~P~p~n~~nA~DaVvQfAI~~L----gf~~edIilygWSIGGF~~~waAs~----------YPdVkavvL 340 (517)
T KOG1553|consen 284 GLPYPVNTLNAADAVVQFAIQVL----GFRQEDIILYGWSIGGFPVAWAASN----------YPDVKAVVL 340 (517)
T ss_pred CCCCcccchHHHHHHHHHHHHHc----CCCccceEEEEeecCCchHHHHhhc----------CCCceEEEe
Confidence 44678888889988887776655 4667899999999999988877742 347899887
No 174
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=51.79 E-value=47 Score=29.30 Aligned_cols=76 Identities=18% Similarity=0.237 Sum_probs=46.8
Q ss_pred ccccceeecCCcccccCCccCCCCcccchHHHHHHHHHHHHHHHHhccccCCCCEEEEecccCcchhHHHHHHHHHHHHc
Q 012900 106 KKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEA 185 (454)
Q Consensus 106 ~~anvLfiDqPvGtGfSy~~~~~~~~~~~~~~A~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~ 185 (454)
...+++-+|.| |.|.+-. ...+.++.++.....+.. ..+ ..++.++|+|+||..+-.+|..+.++
T Consensus 24 ~~~~v~~~~~~-g~~~~~~-----~~~~~~~~~~~~~~~l~~---~~~---~~~~~l~g~s~Gg~~a~~~a~~l~~~--- 88 (212)
T smart00824 24 GRRDVSALPLP-GFGPGEP-----LPASADALVEAQAEAVLR---AAG---GRPFVLVGHSSGGLLAHAVAARLEAR--- 88 (212)
T ss_pred CCccEEEecCC-CCCCCCC-----CCCCHHHHHHHHHHHHHH---hcC---CCCeEEEEECHHHHHHHHHHHHHHhC---
Confidence 34678888877 5554321 223445555555544442 232 46899999999999988888776542
Q ss_pred CCceeeeeeeEecc
Q 012900 186 GKLKLKLGGVALGD 199 (454)
Q Consensus 186 ~~~~inLkGi~iGN 199 (454)
+ ..++++++-+
T Consensus 89 ~---~~~~~l~~~~ 99 (212)
T smart00824 89 G---IPPAAVVLLD 99 (212)
T ss_pred C---CCCcEEEEEc
Confidence 1 1356665543
No 175
>PLN02429 triosephosphate isomerase
Probab=51.40 E-value=34 Score=33.70 Aligned_cols=62 Identities=16% Similarity=0.222 Sum_probs=44.8
Q ss_pred HHHHHHHHHHHHHHHHh-ccccCCCCEEEEecccCcchhHHHHHHHHHHHHcCCceeeeeeeEecccCCCchh
Q 012900 135 VEAANDLTTLLMELFNK-NEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWISPED 206 (454)
Q Consensus 135 ~~~A~d~~~fL~~F~~~-fP~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkGi~iGNg~~~p~~ 206 (454)
.+-++.+.+++++++.. +.+-....+-|. |||---|.-+..+.. ..++.|+.||.+-+++..
T Consensus 238 ~e~~~~v~~~IR~~l~~~~~~~va~~irIL---YGGSV~~~N~~el~~-------~~diDG~LVGgASL~~~~ 300 (315)
T PLN02429 238 PQQAQEVHVAVRGWLKKNVSEEVASKTRII---YGGSVNGGNSAELAK-------EEDIDGFLVGGASLKGPE 300 (315)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhccCceEE---EcCccCHHHHHHHhc-------CCCCCEEEeecceecHHH
Confidence 34566689999999864 332222345555 999999998888764 247999999999998654
No 176
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=50.74 E-value=29 Score=32.08 Aligned_cols=48 Identities=15% Similarity=0.040 Sum_probs=35.7
Q ss_pred chHHHHHHHHHHHHHHHHhccccCCCCEEEEecccCcchhHHHHHHHHH
Q 012900 133 NDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVK 181 (454)
Q Consensus 133 ~~~~~A~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~lA~~i~~ 181 (454)
+-+..++.+.+.|.+..+..+.- .+++.+.|+|-||.++-.....+.+
T Consensus 54 gI~~~g~rL~~eI~~~~~~~~~~-~~~IsfIgHSLGGli~r~al~~~~~ 101 (217)
T PF05057_consen 54 GIDVCGERLAEEILEHIKDYESK-IRKISFIGHSLGGLIARYALGLLHD 101 (217)
T ss_pred hhHHHHHHHHHHHHHhccccccc-cccceEEEecccHHHHHHHHHHhhh
Confidence 45567888888888877765542 4799999999999998766555544
No 177
>PF13956 Ibs_toxin: Toxin Ibs, type I toxin-antitoxin system
Probab=50.00 E-value=11 Score=20.19 Aligned_cols=14 Identities=36% Similarity=0.494 Sum_probs=7.5
Q ss_pred CccchhHHHHHHHH
Q 012900 1 MEKLCGFVATLLFL 14 (454)
Q Consensus 1 ~~~~~~~~~~~~~~ 14 (454)
|-|+++.+++||.+
T Consensus 1 MMk~vIIlvvLLli 14 (19)
T PF13956_consen 1 MMKLVIILVVLLLI 14 (19)
T ss_pred CceehHHHHHHHhc
Confidence 45666655555443
No 178
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=48.65 E-value=1.5e+02 Score=32.94 Aligned_cols=154 Identities=17% Similarity=0.231 Sum_probs=78.2
Q ss_pred HHHHHHHhhhcccchhhhhcCCCCCceeeEEEEecCC-----ceEEEEEE-E-cCC--CCCCCCCCCCEEEEEcCCCCh-
Q 012900 10 TLLFLVSLLFNGGAAARALNKNQDASEEWGYVEVRPK-----AHMFWWLY-K-SPY--RIENPSKPWPIILWLQGGPGA- 79 (454)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~sGyv~v~~~-----~~lfywf~-e-s~~--~~~~p~~~~PlilWlnGGPGc- 79 (454)
.|+.|+.+.--.++.+..|....=++.|.-+++++.. .++-++.| | ++. +...+..--| ||++-|--|.
T Consensus 24 ~ll~l~ll~~f~g~~en~CsmtYMypsy~r~i~i~~r~t~~a~kY~LYLY~Egs~~~e~~~lelsGIP-VLFIPGNAGSy 102 (973)
T KOG3724|consen 24 VLLGLGLLLHFLGHQENGCSMTYMYPSYYRFIEIPERLTPQADKYSLYLYREGSRWWERSTLELSGIP-VLFIPGNAGSY 102 (973)
T ss_pred HHHHHHHHHHhcCCCCCCceeEEEeccceeecCCcccccCCCCceEEEEecccccccccccccCCCce-EEEecCCCCch
Confidence 3344444443345555566666666666666766541 23333333 3 221 1122323323 5677766663
Q ss_pred ------hhhhhccccccCCCccc-CCCCccchhccccceeecCCcccccCCccCCCCcccchHHHHHHHHHHHHHHHH--
Q 012900 80 ------SGVGIGNFEEVGPFDTY-LKPRNSTWLKKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLMELFN-- 150 (454)
Q Consensus 80 ------SS~~~G~f~E~GP~~~~-~~~n~~SW~~~anvLfiDqPvGtGfSy~~~~~~~~~~~~~~A~d~~~fL~~F~~-- 150 (454)
.|. ..+-...||++-. -..|+++. +..-|=|=| -||. -.-.+..+.++.+.++++.-+.
T Consensus 103 KQvRSiAS~-a~n~y~~~~~e~t~~~d~~~~~-DFFaVDFnE-----e~tA-----m~G~~l~dQtEYV~dAIk~ILslY 170 (973)
T KOG3724|consen 103 KQVRSIASV-AQNAYQGGPFEKTEDRDNPFSF-DFFAVDFNE-----EFTA-----MHGHILLDQTEYVNDAIKYILSLY 170 (973)
T ss_pred HHHHHHHHH-HhhhhcCCchhhhhcccCcccc-ceEEEcccc-----hhhh-----hccHhHHHHHHHHHHHHHHHHHHh
Confidence 122 2344567888733 23455554 221111100 0111 0123566777777777776554
Q ss_pred -hccccC---CCCEEEEecccCcchhHHHH
Q 012900 151 -KNEILQ---KSPLFIVAESYGGKFAATLG 176 (454)
Q Consensus 151 -~fP~~~---~~~~yi~GESYgG~yvP~lA 176 (454)
.-+||+ .+.+.|.|+||||.-+-..+
T Consensus 171 r~~~e~~~p~P~sVILVGHSMGGiVAra~~ 200 (973)
T KOG3724|consen 171 RGEREYASPLPHSVILVGHSMGGIVARATL 200 (973)
T ss_pred hcccccCCCCCceEEEEeccchhHHHHHHH
Confidence 345665 56699999999998665443
No 179
>PLN02802 triacylglycerol lipase
Probab=48.22 E-value=47 Score=34.88 Aligned_cols=64 Identities=9% Similarity=0.128 Sum_probs=44.4
Q ss_pred HHHHHHHHHHHHHHHhccccCCCCEEEEecccCcchhHHHHHHHHHHHHcCCceeeeeeeEecccCCC
Q 012900 136 EAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWIS 203 (454)
Q Consensus 136 ~~A~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkGi~iGNg~~~ 203 (454)
.+.+++.+-++++.+++|.- ...++|+|+|-||-.+-..|..|..... ..+.+.-+..|.|-+.
T Consensus 309 S~reqVl~eV~~Ll~~Y~~e-~~sI~VTGHSLGGALAtLaA~dL~~~~~---~~~pV~vyTFGsPRVG 372 (509)
T PLN02802 309 SLSESVVGEVRRLMEKYKGE-ELSITVTGHSLGAALALLVADELATCVP---AAPPVAVFSFGGPRVG 372 (509)
T ss_pred hHHHHHHHHHHHHHHhCCCC-cceEEEeccchHHHHHHHHHHHHHHhCC---CCCceEEEEcCCCCcc
Confidence 56778888888888877642 2479999999999998888877754211 1123455566666554
No 180
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=47.93 E-value=49 Score=31.51 Aligned_cols=77 Identities=17% Similarity=0.205 Sum_probs=47.7
Q ss_pred cccceeecCCcccccCCccCCCCcccchHHHHHHHHHHHHHHHHhccccCCCCEEEEecccCcchhHHHHHHHHHHHHcC
Q 012900 107 KADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAG 186 (454)
Q Consensus 107 ~anvLfiDqPvGtGfSy~~~~~~~~~~~~~~A~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~ 186 (454)
..|+.=.|-- |-|.|-++... .+.-+-.+..|+.|++=+ . +..++.|+|.|-|-----.+|.
T Consensus 88 n~nv~~~DYS-GyG~S~G~psE---~n~y~Di~avye~Lr~~~----g-~~~~Iil~G~SiGt~~tv~Las--------- 149 (258)
T KOG1552|consen 88 NCNVVSYDYS-GYGRSSGKPSE---RNLYADIKAVYEWLRNRY----G-SPERIILYGQSIGTVPTVDLAS--------- 149 (258)
T ss_pred cceEEEEecc-cccccCCCccc---ccchhhHHHHHHHHHhhc----C-CCceEEEEEecCCchhhhhHhh---------
Confidence 4455556655 99999876432 244444555667776422 1 4579999999999543222222
Q ss_pred CceeeeeeeEecccCCC
Q 012900 187 KLKLKLGGVALGDSWIS 203 (454)
Q Consensus 187 ~~~inLkGi~iGNg~~~ 203 (454)
+. .+.|+++-+|+++
T Consensus 150 r~--~~~alVL~SPf~S 164 (258)
T KOG1552|consen 150 RY--PLAAVVLHSPFTS 164 (258)
T ss_pred cC--CcceEEEeccchh
Confidence 11 2899999777765
No 181
>PLN02310 triacylglycerol lipase
Probab=47.44 E-value=46 Score=34.03 Aligned_cols=65 Identities=17% Similarity=0.205 Sum_probs=43.4
Q ss_pred HHHHHHHHHHHHHHHHhcccc-CCCCEEEEecccCcchhHHHHHHHHHHHHcCCceeeeeeeEecccCCC
Q 012900 135 VEAANDLTTLLMELFNKNEIL-QKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWIS 203 (454)
Q Consensus 135 ~~~A~d~~~fL~~F~~~fP~~-~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkGi~iGNg~~~ 203 (454)
..+.+++.+.+++..+.+++- ....+.|+|+|-||-.+-..|..|... ...+++.-+..|.|-+.
T Consensus 185 ~sa~~qVl~eV~~L~~~y~~~~e~~sI~vTGHSLGGALAtLaA~dl~~~----~~~~~v~vyTFGsPRVG 250 (405)
T PLN02310 185 LSASEQVMQEVKRLVNFYRGKGEEVSLTVTGHSLGGALALLNAYEAATT----IPDLFVSVISFGAPRVG 250 (405)
T ss_pred chHHHHHHHHHHHHHHhhcccCCcceEEEEcccHHHHHHHHHHHHHHHh----CcCcceeEEEecCCCcc
Confidence 356677778888877766531 235799999999999888777666432 11234555666666654
No 182
>PLN02162 triacylglycerol lipase
Probab=46.14 E-value=44 Score=34.75 Aligned_cols=40 Identities=18% Similarity=0.262 Sum_probs=29.9
Q ss_pred HHHHHHHHHHHHhccccCCCCEEEEecccCcchhHHHHHHHHH
Q 012900 139 NDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVK 181 (454)
Q Consensus 139 ~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~lA~~i~~ 181 (454)
..+.+.|+.++.++|. .+++++|+|-||-.+-..|..+..
T Consensus 262 ~~I~~~L~~lL~k~p~---~kliVTGHSLGGALAtLaAa~L~~ 301 (475)
T PLN02162 262 YTIRQMLRDKLARNKN---LKYILTGHSLGGALAALFPAILAI 301 (475)
T ss_pred HHHHHHHHHHHHhCCC---ceEEEEecChHHHHHHHHHHHHHH
Confidence 3455666777777775 579999999999988877765543
No 183
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=44.45 E-value=34 Score=31.54 Aligned_cols=44 Identities=14% Similarity=0.148 Sum_probs=33.8
Q ss_pred HHHHhccccCCCCEEEEecccCcchhHHHHHHHHHHHHcCCceeeeeeeEeccc
Q 012900 147 ELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDS 200 (454)
Q Consensus 147 ~F~~~fP~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkGi~iGNg 200 (454)
+|++.+|+.....+-|.|-|.||-.+..+|.+.. .++.++.-||
T Consensus 11 ~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~~----------~i~avVa~~p 54 (213)
T PF08840_consen 11 DWLKSHPEVDPDKIGIIGISKGAELALLLASRFP----------QISAVVAISP 54 (213)
T ss_dssp HHHHCSTTB--SSEEEEEETHHHHHHHHHHHHSS----------SEEEEEEES-
T ss_pred HHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcCC----------CccEEEEeCC
Confidence 4888999998899999999999999998887652 5777776443
No 184
>PLN02561 triosephosphate isomerase
Probab=44.43 E-value=44 Score=31.91 Aligned_cols=60 Identities=17% Similarity=0.248 Sum_probs=43.9
Q ss_pred HHHHHHHHHHHHHHHHh-ccccCCCCEEEEecccCcchhHHHHHHHHHHHHcCCceeeeeeeEecccCCCc
Q 012900 135 VEAANDLTTLLMELFNK-NEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWISP 204 (454)
Q Consensus 135 ~~~A~d~~~fL~~F~~~-fP~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkGi~iGNg~~~p 204 (454)
.+-++++.+++++++.+ +..-....+-|. |||---|.-+..+.. ..++.|+.||.+-+++
T Consensus 179 ~~~~~~v~~~Ir~~l~~~~~~~~a~~i~IL---YGGSV~~~N~~~l~~-------~~~iDG~LVG~ASL~~ 239 (253)
T PLN02561 179 PAQAQEVHDELRKWLHKNVSPEVAATTRII---YGGSVTGANCKELAA-------QPDVDGFLVGGASLKP 239 (253)
T ss_pred HHHHHHHHHHHHHHHHHhhcccccccceEE---EeCCcCHHHHHHHhc-------CCCCCeEEEehHhhHH
Confidence 34566688999988853 433223455555 999999998888764 2479999999999986
No 185
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=44.11 E-value=14 Score=33.99 Aligned_cols=24 Identities=21% Similarity=0.050 Sum_probs=20.2
Q ss_pred CeEEEEEcCCcccccccCChhhhh
Q 012900 424 NLHFYWILGAGHFKNYCDTWSGKR 447 (454)
Q Consensus 424 nLtf~~V~~AGHmvP~dqP~~~~~ 447 (454)
+..++.|.++||+++.++|+...+
T Consensus 210 ~~~~~~i~~~gH~~~~e~p~~~~~ 233 (242)
T PRK11126 210 ALPLHVIPNAGHNAHRENPAAFAA 233 (242)
T ss_pred cCeEEEeCCCCCchhhhChHHHHH
Confidence 457788999999999999997643
No 186
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=42.00 E-value=49 Score=32.89 Aligned_cols=77 Identities=8% Similarity=0.012 Sum_probs=45.2
Q ss_pred ccceeecCCcccccCCccCCCCcccchHHH-HHHHHHHHHHHHHhccccCCCCEEEEecccCcchhHHHHHHHHHHHHcC
Q 012900 108 ADLLFVDNPVGTGYSYVEDNSSFVKNDVEA-ANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAG 186 (454)
Q Consensus 108 anvLfiDqPvGtGfSy~~~~~~~~~~~~~~-A~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~ 186 (454)
.+++-+|-. |-|.|-. ..+.++. .+++-++++...+..+ ..++++.|+|+||..+..++..- +
T Consensus 95 ~~V~~~D~~-g~g~s~~------~~~~~d~~~~~~~~~v~~l~~~~~---~~~i~lvGhS~GG~i~~~~~~~~-----~- 158 (350)
T TIGR01836 95 QDVYLIDWG-YPDRADR------YLTLDDYINGYIDKCVDYICRTSK---LDQISLLGICQGGTFSLCYAALY-----P- 158 (350)
T ss_pred CeEEEEeCC-CCCHHHh------cCCHHHHHHHHHHHHHHHHHHHhC---CCcccEEEECHHHHHHHHHHHhC-----c-
Confidence 567777864 4444321 1233333 3445556665555443 46899999999998776554321 1
Q ss_pred CceeeeeeeEecccCCC
Q 012900 187 KLKLKLGGVALGDSWIS 203 (454)
Q Consensus 187 ~~~inLkGi~iGNg~~~ 203 (454)
-.++++++-++.++
T Consensus 159 ---~~v~~lv~~~~p~~ 172 (350)
T TIGR01836 159 ---DKIKNLVTMVTPVD 172 (350)
T ss_pred ---hheeeEEEeccccc
Confidence 13778777666554
No 187
>PLN03037 lipase class 3 family protein; Provisional
Probab=41.80 E-value=62 Score=34.13 Aligned_cols=46 Identities=22% Similarity=0.218 Sum_probs=34.9
Q ss_pred HHHHHHHHHHHHHHHhcccc-CCCCEEEEecccCcchhHHHHHHHHH
Q 012900 136 EAANDLTTLLMELFNKNEIL-QKSPLFIVAESYGGKFAATLGLAAVK 181 (454)
Q Consensus 136 ~~A~d~~~fL~~F~~~fP~~-~~~~~yi~GESYgG~yvP~lA~~i~~ 181 (454)
.+.+++.+-+++..+.+++. ....++|+|+|-||-.+-..|..|..
T Consensus 295 SareQVl~eV~rLv~~Yk~~ge~~SItVTGHSLGGALAtLaA~DIa~ 341 (525)
T PLN03037 295 SASEQVMEEVKRLVNFFKDRGEEVSLTITGHSLGGALALLNAYEAAR 341 (525)
T ss_pred hhHHHHHHHHHHHHHhccccCCcceEEEeccCHHHHHHHHHHHHHHH
Confidence 45567777888888777653 24579999999999988887777654
No 188
>COG0627 Predicted esterase [General function prediction only]
Probab=41.53 E-value=64 Score=31.89 Aligned_cols=107 Identities=20% Similarity=0.163 Sum_probs=56.3
Q ss_pred CCCCEEEEEcCCCChhhhhhccccccCCCccc--------CCCCccchhccccceeecCCcccccCCccCCCCcccchHH
Q 012900 65 KPWPIILWLQGGPGASGVGIGNFEEVGPFDTY--------LKPRNSTWLKKADLLFVDNPVGTGYSYVEDNSSFVKNDVE 136 (454)
Q Consensus 65 ~~~PlilWlnGGPGcSS~~~G~f~E~GP~~~~--------~~~n~~SW~~~anvLfiDqPvGtGfSy~~~~~~~~~~~~~ 136 (454)
++-|++ |+.+|..|.. =.+.+.++.+-. ..+.-.-+....++-=|+ |+|.|.|+=.+-........
T Consensus 52 ~~ipV~-~~l~G~t~~~---~~~~~~~g~~~~a~~~g~~~~~p~t~~~~~~~~~~vv~-p~G~~~sfY~d~~~~~~~~~- 125 (316)
T COG0627 52 RDIPVL-YLLSGLTCNE---PNVYLLDGLRRQADESGWAVVTPDTSPRGAGVNISVVM-PLGGGASFYSDWTQPPWASG- 125 (316)
T ss_pred CCCCEE-EEeCCCCCCC---CceEeccchhhhhhhcCeEEecCCCCcccCCCCccccc-cCCCccceecccccCccccC-
Confidence 443555 4555888884 234455555421 111122244444444445 68999887443211111111
Q ss_pred HHHHHHHHHH-----HHHHhccccCC-CCEEEEecccCcchhHHHHHH
Q 012900 137 AANDLTTLLM-----ELFNKNEILQK-SPLFIVAESYGGKFAATLGLA 178 (454)
Q Consensus 137 ~A~d~~~fL~-----~F~~~fP~~~~-~~~yi~GESYgG~yvP~lA~~ 178 (454)
..+.+.||. .+.+.||--+. ..-.|+|.|.||+=+-.+|.+
T Consensus 126 -~~q~~tfl~~ELP~~~~~~f~~~~~~~~~aI~G~SMGG~GAl~lA~~ 172 (316)
T COG0627 126 -PYQWETFLTQELPALWEAAFPADGTGDGRAIAGHSMGGYGALKLALK 172 (316)
T ss_pred -ccchhHHHHhhhhHHHHHhcCcccccCCceeEEEeccchhhhhhhhh
Confidence 234444443 34455653221 268899999999987777754
No 189
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=41.42 E-value=41 Score=33.44 Aligned_cols=30 Identities=7% Similarity=0.067 Sum_probs=25.2
Q ss_pred hcCceEEEEeccCCCCCChhhHHHHHHhcc
Q 012900 363 AKGVNVTVYNGQLDVICSTKGTEAWIEKLK 392 (454)
Q Consensus 363 ~~~irVLiy~Gd~D~i~n~~G~~~~i~~L~ 392 (454)
+-..+||+..|..|.++|....+.+.+.+.
T Consensus 284 ~i~~Pvliv~G~~D~i~~~~~~~~~~~~~~ 313 (350)
T TIGR01836 284 NIKMPILNIYAERDHLVPPDASKALNDLVS 313 (350)
T ss_pred hCCCCeEEEecCCCCcCCHHHHHHHHHHcC
Confidence 336899999999999999988887777665
No 190
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=39.63 E-value=54 Score=29.47 Aligned_cols=63 Identities=16% Similarity=0.102 Sum_probs=41.0
Q ss_pred ccccceeecCCcc--cccCCccCCCCcccchHHHHHHHHHHHHHHHHhc-cccCCCCEEEEecccCcchhHHHH
Q 012900 106 KKADLLFVDNPVG--TGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKN-EILQKSPLFIVAESYGGKFAATLG 176 (454)
Q Consensus 106 ~~anvLfiDqPvG--tGfSy~~~~~~~~~~~~~~A~d~~~fL~~F~~~f-P~~~~~~~yi~GESYgG~yvP~lA 176 (454)
+.|-|.|++-... ...+-.+ ..--+..|.+|-.|++.+=..+ | .-.+-+.|+|||.--+-.-+
T Consensus 62 ~vAvV~WlgYdaP~~~~~~a~~-----~~~A~~ga~~L~~f~~gl~a~~~~---~~~~tv~GHSYGS~v~G~A~ 127 (177)
T PF06259_consen 62 SVAVVAWLGYDAPAGGLPDAAS-----PGYARAGAPRLARFLDGLRATHGP---DAHLTVVGHSYGSTVVGLAA 127 (177)
T ss_pred CeEEEEEcCCCCCCCccccccC-----chHHHHHHHHHHHHHHHhhhhcCC---CCCEEEEEecchhHHHHHHh
Confidence 6778888865544 2222211 1224677888888888876656 3 35799999999987555444
No 191
>PLN02847 triacylglycerol lipase
Probab=38.85 E-value=42 Score=35.92 Aligned_cols=60 Identities=18% Similarity=0.154 Sum_probs=36.7
Q ss_pred HHHHHHHHHHHHhccccCCCCEEEEecccCcchhHHHHHHHHHHHHcCCceeeeeeeEecc-cCCCch
Q 012900 139 NDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGD-SWISPE 205 (454)
Q Consensus 139 ~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkGi~iGN-g~~~p~ 205 (454)
+.+...|++-+..+|.| ++.|+|+|.||--+..++..+.+. . . --+++.+..|- |++++.
T Consensus 235 ~~i~~~L~kal~~~PdY---kLVITGHSLGGGVAALLAilLRe~-~--~-fssi~CyAFgPp~cvS~e 295 (633)
T PLN02847 235 KLSTPCLLKALDEYPDF---KIKIVGHSLGGGTAALLTYILREQ-K--E-FSSTTCVTFAPAACMTWD 295 (633)
T ss_pred HHHHHHHHHHHHHCCCC---eEEEeccChHHHHHHHHHHHHhcC-C--C-CCCceEEEecCchhcCHH
Confidence 33334455555667765 899999999999877776544321 1 1 23566666664 344543
No 192
>PRK00042 tpiA triosephosphate isomerase; Provisional
Probab=38.73 E-value=79 Score=30.10 Aligned_cols=61 Identities=16% Similarity=0.317 Sum_probs=44.2
Q ss_pred HHHHHHHHHHHHHHHHh-ccccCCCCEEEEecccCcchhHHHHHHHHHHHHcCCceeeeeeeEecccCCCchh
Q 012900 135 VEAANDLTTLLMELFNK-NEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWISPED 206 (454)
Q Consensus 135 ~~~A~d~~~fL~~F~~~-fP~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkGi~iGNg~~~p~~ 206 (454)
.+-++++.+|+++++.. +. -....+-|. |||---|.-+..+.. ..++.|+.||.+-+++..
T Consensus 179 ~~~~~~v~~~Ir~~l~~~~~-~~~~~~~Il---YGGSV~~~N~~~l~~-------~~~vDG~LVG~Asl~~~~ 240 (250)
T PRK00042 179 PEQAQEVHAFIRAVLAELYG-EVAEKVRIL---YGGSVKPDNAAELMA-------QPDIDGALVGGASLKAED 240 (250)
T ss_pred HHHHHHHHHHHHHHHHHhcc-cccCCceEE---EcCCCCHHHHHHHhc-------CCCCCEEEEeeeeechHH
Confidence 35667788999998863 33 123344454 999999998888764 247999999999998754
No 193
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=38.73 E-value=45 Score=36.27 Aligned_cols=48 Identities=17% Similarity=0.187 Sum_probs=39.9
Q ss_pred CceEEEEeccCCCCCChhhHHHHHHhcccccccccccCCceeeEeCCCceeeeEEEEEcCeEEEEEcCCcccccc
Q 012900 365 GVNVTVYNGQLDVICSTKGTEAWIEKLKWDGLQKFLSTERTPLFCGNDKITKGFKKSYKNLHFYWILGAGHFKNY 439 (454)
Q Consensus 365 ~irVLiy~Gd~D~i~n~~G~~~~i~~L~W~g~~~f~~a~~~~w~~~~~~~~~G~~k~~~nLtf~~V~~AGHmvP~ 439 (454)
.-++||.+|..|..|+..-++++.+.|+-.|. +..++++.+.||-.+.
T Consensus 551 ~~P~LliHG~~D~~v~~~q~~~~~~aL~~~g~---------------------------~~~~~~~p~e~H~~~~ 598 (620)
T COG1506 551 KTPLLLIHGEEDDRVPIEQAEQLVDALKRKGK---------------------------PVELVVFPDEGHGFSR 598 (620)
T ss_pred CCCEEEEeecCCccCChHHHHHHHHHHHHcCc---------------------------eEEEEEeCCCCcCCCC
Confidence 46899999999999999999999999983321 3456778889998887
No 194
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=38.69 E-value=68 Score=30.72 Aligned_cols=63 Identities=25% Similarity=0.355 Sum_probs=37.2
Q ss_pred cchHHHHHHHHHHHHHHHH-hcc-----ccCCCCEEEEecccCcchhHHHHHHHHHHHHcCCceeeeeeeEeccc
Q 012900 132 KNDVEAANDLTTLLMELFN-KNE-----ILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDS 200 (454)
Q Consensus 132 ~~~~~~A~d~~~fL~~F~~-~fP-----~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkGi~iGNg 200 (454)
+.+.+.+.++.++|.+=++ ..| ++ ..+.|+|||=||+-+-.++.. +.+....++++++++-+|
T Consensus 61 ~~~~~~~~~vi~Wl~~~L~~~l~~~v~~D~--s~l~l~GHSrGGk~Af~~al~----~~~~~~~~~~~ali~lDP 129 (259)
T PF12740_consen 61 TDEVASAAEVIDWLAKGLESKLPLGVKPDF--SKLALAGHSRGGKVAFAMALG----NASSSLDLRFSALILLDP 129 (259)
T ss_pred chhHHHHHHHHHHHHhcchhhccccccccc--cceEEeeeCCCCHHHHHHHhh----hcccccccceeEEEEecc
Confidence 3455666667666655221 222 32 459999999999954444322 222233568999998443
No 195
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=38.63 E-value=65 Score=31.95 Aligned_cols=53 Identities=25% Similarity=0.245 Sum_probs=32.3
Q ss_pred HHHHHHHHHHHHhccccCCCCEEEEecccCcchhHHHHHHHHHHHHcCCceeeeeeeEeccc
Q 012900 139 NDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDS 200 (454)
Q Consensus 139 ~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkGi~iGNg 200 (454)
+|+..||.....++|. +++|.+|-|.||.. +|..+.++ ..+.. ...++++-+|
T Consensus 132 ~D~~~~l~~l~~~~~~---r~~~avG~SLGgnm---La~ylgee--g~d~~-~~aa~~vs~P 184 (345)
T COG0429 132 EDIRFFLDWLKARFPP---RPLYAVGFSLGGNM---LANYLGEE--GDDLP-LDAAVAVSAP 184 (345)
T ss_pred hHHHHHHHHHHHhCCC---CceEEEEecccHHH---HHHHHHhh--ccCcc-cceeeeeeCH
Confidence 5566666655556765 89999999999853 44555442 11222 3556655333
No 196
>PF09292 Neil1-DNA_bind: Endonuclease VIII-like 1, DNA bind; InterPro: IPR015371 This domain is predominantly found in Endonuclease VIII-like 1 proteins and adopts a glucocorticoid receptor-like fold. Structural analysis reveals a zincless finger motif that is required for glycosylase activity []. ; PDB: 1TDH_A.
Probab=38.29 E-value=19 Score=23.19 Aligned_cols=11 Identities=45% Similarity=1.150 Sum_probs=6.2
Q ss_pred CEEEEEcCCCC
Q 012900 68 PIILWLQGGPG 78 (454)
Q Consensus 68 PlilWlnGGPG 78 (454)
-=+||++|-||
T Consensus 25 gRTiWFqGdPG 35 (39)
T PF09292_consen 25 GRTIWFQGDPG 35 (39)
T ss_dssp S-EEEESS---
T ss_pred CCEEEeeCCCC
Confidence 46899999888
No 197
>PTZ00333 triosephosphate isomerase; Provisional
Probab=37.48 E-value=64 Score=30.83 Aligned_cols=61 Identities=16% Similarity=0.293 Sum_probs=44.3
Q ss_pred hHHHHHHHHHHHHHHHHh-ccccCCCCEEEEecccCcchhHHHHHHHHHHHHcCCceeeeeeeEecccCCCc
Q 012900 134 DVEAANDLTTLLMELFNK-NEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWISP 204 (454)
Q Consensus 134 ~~~~A~d~~~fL~~F~~~-fP~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkGi~iGNg~~~p 204 (454)
+.+.+++++.++++++.. +.......+-|. |||---|.-+..+.. ..++.|+.||.+-+++
T Consensus 181 ~~e~i~~~~~~IR~~l~~~~~~~~~~~~~IL---YGGSV~~~N~~~l~~-------~~~vDG~LvG~asl~~ 242 (255)
T PTZ00333 181 TPEQAQEVHAFIRKWLAEKVGADVAEATRII---YGGSVNEKNCKELIK-------QPDIDGFLVGGASLKP 242 (255)
T ss_pred CHHHHHHHHHHHHHHHHHhhcccccccceEE---EcCCCCHHHHHHHhc-------CCCCCEEEEehHhhhh
Confidence 446677799999998863 433223345554 999999999888764 2379999999998874
No 198
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=37.18 E-value=32 Score=31.72 Aligned_cols=48 Identities=27% Similarity=0.342 Sum_probs=28.5
Q ss_pred CceEEEEeccCCCCCChhh-HHHHHHhcccccccccccCCceeeEeCCCceeeeEEEEEcCeEEEEEcCCcccc
Q 012900 365 GVNVTVYNGQLDVICSTKG-TEAWIEKLKWDGLQKFLSTERTPLFCGNDKITKGFKKSYKNLHFYWILGAGHFK 437 (454)
Q Consensus 365 ~irVLiy~Gd~D~i~n~~G-~~~~i~~L~W~g~~~f~~a~~~~w~~~~~~~~~G~~k~~~nLtf~~V~~AGHmv 437 (454)
+-+||+.+|..|.+-|..- .+..+++|+=.+. . .+++.+...+|||+.
T Consensus 115 ~~piLli~g~dD~~WpS~~~a~~i~~rL~~~~~----------------~---------~~~~~l~Y~~aGH~i 163 (213)
T PF08840_consen 115 KGPILLISGEDDQIWPSSEMAEQIEERLKAAGF----------------P---------HNVEHLSYPGAGHLI 163 (213)
T ss_dssp -SEEEEEEETT-SSS-HHHHHHHHHHHHHCTT------------------------------EEEEETTB-S--
T ss_pred CCCEEEEEeCCCCccchHHHHHHHHHHHHHhCC----------------C---------CcceEEEcCCCCcee
Confidence 5799999999999998664 4456667772111 0 157778889999996
No 199
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=37.01 E-value=1.5e+02 Score=31.03 Aligned_cols=113 Identities=23% Similarity=0.359 Sum_probs=66.9
Q ss_pred eEEEEEEEcCCCCCCCCCCCCEEEEEcCCCChhhhhhcccccc---CCCcccCCCCccchhccccceeecCCcccccCCc
Q 012900 48 HMFWWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEV---GPFDTYLKPRNSTWLKKADLLFVDNPVGTGYSYV 124 (454)
Q Consensus 48 ~lfywf~es~~~~~~p~~~~PlilWlnGGPGcSS~~~G~f~E~---GP~~~~~~~n~~SW~~~anvLfiDqPvGtGfSy~ 124 (454)
.++|+|.+ .|- |. ||.+++.|==.+-+. -|.|+.. .|| |||=|.-+--|==|.
T Consensus 277 Ei~yYFnP-----GD~-KP-PL~VYFSGyR~aEGF-Egy~MMk~Lg~Pf----------------LL~~DpRleGGaFYl 332 (511)
T TIGR03712 277 EFIYYFNP-----GDF-KP-PLNVYFSGYRPAEGF-EGYFMMKRLGAPF----------------LLIGDPRLEGGAFYL 332 (511)
T ss_pred eeEEecCC-----cCC-CC-CeEEeeccCcccCcc-hhHHHHHhcCCCe----------------EEeeccccccceeee
Confidence 46665544 343 44 999999995555555 4555521 233 455554444452232
Q ss_pred cCCCCcccchHHHHHHHHHHHHHHHHhccccCCCCEEEEecccCcchhHHHHHHHHHHHHcCCceeeeeeeEecccCCCc
Q 012900 125 EDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWISP 204 (454)
Q Consensus 125 ~~~~~~~~~~~~~A~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkGi~iGNg~~~p 204 (454)
. ++ +--..+.+.+++-+... .|..+++.|.|=|.|-.=+-+.+. ++|=..|+||-|+++-
T Consensus 333 G-------s~-eyE~~I~~~I~~~L~~L-gF~~~qLILSGlSMGTfgAlYYga-----------~l~P~AIiVgKPL~NL 392 (511)
T TIGR03712 333 G-------SD-EYEQGIINVIQEKLDYL-GFDHDQLILSGLSMGTFGALYYGA-----------KLSPHAIIVGKPLVNL 392 (511)
T ss_pred C-------cH-HHHHHHHHHHHHHHHHh-CCCHHHeeeccccccchhhhhhcc-----------cCCCceEEEcCcccch
Confidence 1 22 22233444555544332 577899999999998664554443 3466889999998873
No 200
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=36.62 E-value=1.9e+02 Score=28.16 Aligned_cols=98 Identities=19% Similarity=0.289 Sum_probs=58.6
Q ss_pred CEEEEEcCCCChhhhhhccccccCCCcccCCCCccchhcccc--ceeecCCcccccCCccCCCCcccchHHHHHHHHHHH
Q 012900 68 PIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLKKAD--LLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLL 145 (454)
Q Consensus 68 PlilWlnGGPGcSS~~~G~f~E~GP~~~~~~~n~~SW~~~an--vLfiDqPvGtGfSy~~~~~~~~~~~~~~A~d~~~fL 145 (454)
.+|+=++|-||.== .+ ++ --++-+.++ +|=|--| |-||+-.... ...+.++-+ .|.
T Consensus 36 gTVv~~hGsPGSH~-DF-------------kY-i~~~l~~~~iR~I~iN~P-Gf~~t~~~~~--~~~~n~er~----~~~ 93 (297)
T PF06342_consen 36 GTVVAFHGSPGSHN-DF-------------KY-IRPPLDEAGIRFIGINYP-GFGFTPGYPD--QQYTNEERQ----NFV 93 (297)
T ss_pred eeEEEecCCCCCcc-ch-------------hh-hhhHHHHcCeEEEEeCCC-CCCCCCCCcc--cccChHHHH----HHH
Confidence 47999999999753 11 11 013333344 4556778 7777754332 233444444 455
Q ss_pred HHHHHhccccCCCCEEEEecccCcchhHHHHHHHHHHHHcCCceeeeeeeEeccc
Q 012900 146 MELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDS 200 (454)
Q Consensus 146 ~~F~~~fP~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkGi~iGNg 200 (454)
..|++.- +++ ..+.+.|+|-|+--+..+|... .+.|+++-||
T Consensus 94 ~~ll~~l-~i~-~~~i~~gHSrGcenal~la~~~-----------~~~g~~lin~ 135 (297)
T PF06342_consen 94 NALLDEL-GIK-GKLIFLGHSRGCENALQLAVTH-----------PLHGLVLINP 135 (297)
T ss_pred HHHHHHc-CCC-CceEEEEeccchHHHHHHHhcC-----------ccceEEEecC
Confidence 5555543 343 5677789999999888777432 4678888554
No 201
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=36.33 E-value=65 Score=32.12 Aligned_cols=60 Identities=18% Similarity=0.232 Sum_probs=41.0
Q ss_pred HHHHHHHHHHHHhccccCCCCEEEEecccCcchhHHHHHHHHHHHHcCCceeeeeeeEecccCCC
Q 012900 139 NDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWIS 203 (454)
Q Consensus 139 ~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkGi~iGNg~~~ 203 (454)
..+.+-++.....+| +..++++|+|=||-++...|..|...... ....++=+--|-|-+.
T Consensus 155 ~~~~~~~~~L~~~~~---~~~i~vTGHSLGgAlA~laa~~i~~~~~~--~~~~v~v~tFG~PRvG 214 (336)
T KOG4569|consen 155 SGLDAELRRLIELYP---NYSIWVTGHSLGGALASLAALDLVKNGLK--TSSPVKVYTFGQPRVG 214 (336)
T ss_pred HHHHHHHHHHHHhcC---CcEEEEecCChHHHHHHHHHHHHHHcCCC--CCCceEEEEecCCCcc
Confidence 344455555566666 56999999999999999999999763211 2345555566666554
No 202
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=35.65 E-value=52 Score=31.08 Aligned_cols=64 Identities=23% Similarity=0.360 Sum_probs=45.0
Q ss_pred ccceeecCCcccccCCccCCCCcccchHHHHHHHHHHHHHHHHhccccCCCCEEEEecccCcchhHHHHHHHHH
Q 012900 108 ADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVK 181 (454)
Q Consensus 108 anvLfiDqPvGtGfSy~~~~~~~~~~~~~~A~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~lA~~i~~ 181 (454)
.-++=|+-| |=|==+.. ...++.++.|+.+...|+- -+..+|+-++|+|+||..+=.+|.++-+
T Consensus 34 iel~avqlP-GR~~r~~e---p~~~di~~Lad~la~el~~------~~~d~P~alfGHSmGa~lAfEvArrl~~ 97 (244)
T COG3208 34 IELLAVQLP-GRGDRFGE---PLLTDIESLADELANELLP------PLLDAPFALFGHSMGAMLAFEVARRLER 97 (244)
T ss_pred hheeeecCC-CcccccCC---cccccHHHHHHHHHHHhcc------ccCCCCeeecccchhHHHHHHHHHHHHH
Confidence 456777777 66633322 3566777778877666642 2557899999999999988888877743
No 203
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=35.52 E-value=33 Score=32.65 Aligned_cols=27 Identities=19% Similarity=0.188 Sum_probs=20.8
Q ss_pred CceEEEEeccCCCCCChhhHHHHHHhc
Q 012900 365 GVNVTVYNGQLDVICSTKGTEAWIEKL 391 (454)
Q Consensus 365 ~irVLiy~Gd~D~i~n~~G~~~~i~~L 391 (454)
..+|||++|..|-++|+.-..+..+..
T Consensus 192 ~~PVLiiHgtdDevv~~sHg~~Lye~~ 218 (258)
T KOG1552|consen 192 TCPVLIIHGTDDEVVDFSHGKALYERC 218 (258)
T ss_pred cCCEEEEecccCceecccccHHHHHhc
Confidence 469999999999999877665544443
No 204
>cd00311 TIM Triosephosphate isomerase (TIM) is a glycolytic enzyme that catalyzes the interconversion of dihydroxyacetone phosphate and D-glyceraldehyde-3-phosphate. The reaction is very efficient and requires neither cofactors nor metal ions. TIM, usually homodimeric, but in some organisms tetrameric, is ubiqitous and conserved in function across eukaryotes, bacteria and archaea.
Probab=34.78 E-value=1e+02 Score=29.25 Aligned_cols=60 Identities=18% Similarity=0.338 Sum_probs=43.5
Q ss_pred HHHHHHHHHHHHHHHh-ccccCCCCEEEEecccCcchhHHHHHHHHHHHHcCCceeeeeeeEecccCCCchh
Q 012900 136 EAANDLTTLLMELFNK-NEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWISPED 206 (454)
Q Consensus 136 ~~A~d~~~fL~~F~~~-fP~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkGi~iGNg~~~p~~ 206 (454)
+-+.++..++++++.. +.+ ....+-|. |||---|.=+..+.+. -++.|+.||.+-+++..
T Consensus 176 ~~~~ev~~~ir~~l~~~~~~-~~~~~~Il---YGGSV~~~N~~~l~~~-------~~vDG~LVG~Asl~~~~ 236 (242)
T cd00311 176 EQAQEVHAFIRKLLAELYGE-VAEKVRIL---YGGSVNPENAAELLAQ-------PDIDGVLVGGASLKAES 236 (242)
T ss_pred HHHHHHHHHHHHHHHHhccc-ccCceeEE---ECCCCCHHHHHHHhcC-------CCCCEEEeehHhhCHHH
Confidence 4466688999998864 433 33445555 9999999888877652 26999999999998654
No 205
>PRK14565 triosephosphate isomerase; Provisional
Probab=33.64 E-value=83 Score=29.71 Aligned_cols=55 Identities=18% Similarity=0.222 Sum_probs=40.9
Q ss_pred hHHHHHHHHHHHHHHHHhccccCCCCEEEEecccCcchhHHHHHHHHHHHHcCCceeeeeeeEecccCCCchh
Q 012900 134 DVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWISPED 206 (454)
Q Consensus 134 ~~~~A~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkGi~iGNg~~~p~~ 206 (454)
+.+.+++++++++++. .+.-|. |||.--|.-+..+.+ .-++.|+.||.+-++|..
T Consensus 172 ~~e~i~~~~~~Ir~~~--------~~~~Il---YGGSV~~~N~~~l~~-------~~~iDG~LvG~asl~~~~ 226 (237)
T PRK14565 172 SNDAIAEAFEIIRSYD--------SKSHII---YGGSVNQENIRDLKS-------INQLSGVLVGSASLDVDS 226 (237)
T ss_pred CHHHHHHHHHHHHHhC--------CCceEE---EcCccCHhhHHHHhc-------CCCCCEEEEechhhcHHH
Confidence 3455677888998862 233333 999999998888865 236999999999998754
No 206
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=33.54 E-value=43 Score=31.56 Aligned_cols=65 Identities=28% Similarity=0.252 Sum_probs=38.2
Q ss_pred ccceeecCCcccccCCccCCCCcccc-hHHHHHHHHHHHHHHHHhccccCCCCEEEEecccCcchhHHHH
Q 012900 108 ADLLFVDNPVGTGYSYVEDNSSFVKN-DVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLG 176 (454)
Q Consensus 108 anvLfiDqPvGtGfSy~~~~~~~~~~-~~~~A~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~lA 176 (454)
..||-.|-- |.|=|.....+..... .+=+..|+-..|...=..-|+ +|+|..|+||||+-.=.++
T Consensus 58 f~Vlt~dyR-G~g~S~p~~~~~~~~~~~DwA~~D~~aal~~~~~~~~~---~P~y~vgHS~GGqa~gL~~ 123 (281)
T COG4757 58 FEVLTFDYR-GIGQSRPASLSGSQWRYLDWARLDFPAALAALKKALPG---HPLYFVGHSFGGQALGLLG 123 (281)
T ss_pred ceEEEEecc-cccCCCccccccCccchhhhhhcchHHHHHHHHhhCCC---CceEEeeccccceeecccc
Confidence 356666755 7777754422211111 233455666566544444454 8999999999999654443
No 207
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=33.14 E-value=79 Score=28.30 Aligned_cols=81 Identities=15% Similarity=0.164 Sum_probs=51.4
Q ss_pred cceeecCCcccccCCccCCCCcccchHHHHHHHHHHHHHHHHhccccCCCCEEEEecccCcchhHHHHHH--HHHHHHcC
Q 012900 109 DLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLA--AVKAIEAG 186 (454)
Q Consensus 109 nvLfiDqPvGtGfSy~~~~~~~~~~~~~~A~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~lA~~--i~~~~~~~ 186 (454)
.+--|+-|+..+.. .+..+..+.+.++...+++...+-|. .++.|+|-|=|+.-+-..+.. +...
T Consensus 41 ~~~~V~YpA~~~~~------~y~~S~~~G~~~~~~~i~~~~~~CP~---~kivl~GYSQGA~V~~~~~~~~~l~~~---- 107 (179)
T PF01083_consen 41 AVQGVEYPASLGPN------SYGDSVAAGVANLVRLIEEYAARCPN---TKIVLAGYSQGAMVVGDALSGDGLPPD---- 107 (179)
T ss_dssp EEEE--S---SCGG------SCHHHHHHHHHHHHHHHHHHHHHSTT---SEEEEEEETHHHHHHHHHHHHTTSSHH----
T ss_pred EEEecCCCCCCCcc------cccccHHHHHHHHHHHHHHHHHhCCC---CCEEEEecccccHHHHHHHHhccCChh----
Confidence 33446677777662 13457788889999999999998885 799999999998877666554 1111
Q ss_pred Cceeeeee-eEecccCCC
Q 012900 187 KLKLKLGG-VALGDSWIS 203 (454)
Q Consensus 187 ~~~inLkG-i~iGNg~~~ 203 (454)
..=++.+ +.+|||.-.
T Consensus 108 -~~~~I~avvlfGdP~~~ 124 (179)
T PF01083_consen 108 -VADRIAAVVLFGDPRRG 124 (179)
T ss_dssp -HHHHEEEEEEES-TTTB
T ss_pred -hhhhEEEEEEecCCccc
Confidence 1124666 477777764
No 208
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=32.39 E-value=1.8e+02 Score=28.67 Aligned_cols=55 Identities=11% Similarity=0.094 Sum_probs=37.4
Q ss_pred HHHHHHHHHHHHHHhccccCCCCEEEEecccCcchhHHHHHHHHHHHHcCCceeeeeeeEecccCC
Q 012900 137 AANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWI 202 (454)
Q Consensus 137 ~A~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkGi~iGNg~~ 202 (454)
+..|.+.++. |+...|+.-.+.+.++|+|-||-..-.+|. +. + .++.++...|++
T Consensus 155 ~~~D~~ravd-~l~slpevD~~rI~v~G~SqGG~lal~~aa-Ld----~-----rv~~~~~~vP~l 209 (320)
T PF05448_consen 155 VYLDAVRAVD-FLRSLPEVDGKRIGVTGGSQGGGLALAAAA-LD----P-----RVKAAAADVPFL 209 (320)
T ss_dssp HHHHHHHHHH-HHHTSTTEEEEEEEEEEETHHHHHHHHHHH-HS----S-----T-SEEEEESESS
T ss_pred HHHHHHHHHH-HHHhCCCcCcceEEEEeecCchHHHHHHHH-hC----c-----cccEEEecCCCc
Confidence 3455555554 667789988899999999999987766653 21 1 477777755544
No 209
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=32.15 E-value=2.5e+02 Score=27.55 Aligned_cols=71 Identities=10% Similarity=0.054 Sum_probs=38.3
Q ss_pred cchHHHHHHHHHHHHHHHHhccc-cCCCCEEEEecccCcchhHHHHHHHHHHHHcCCceeeeeeeEecccCCCchh
Q 012900 132 KNDVEAANDLTTLLMELFNKNEI-LQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWISPED 206 (454)
Q Consensus 132 ~~~~~~A~d~~~fL~~F~~~fP~-~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkGi~iGNg~~~p~~ 206 (454)
.+.++-++|+-+.++.+-..... +...++.|+|+|=|..=+-.... ..+.. ...-.++|+|+-.|.-|...
T Consensus 81 ~SL~~D~~eI~~~v~ylr~~~~g~~~~~kIVLmGHSTGcQdvl~Yl~---~~~~~-~~~~~VdG~ILQApVSDREa 152 (303)
T PF08538_consen 81 SSLDRDVEEIAQLVEYLRSEKGGHFGREKIVLMGHSTGCQDVLHYLS---SPNPS-PSRPPVDGAILQAPVSDREA 152 (303)
T ss_dssp --HHHHHHHHHHHHHHHHHHS------S-EEEEEECCHHHHHHHHHH---H-TT----CCCEEEEEEEEE---TTS
T ss_pred chhhhHHHHHHHHHHHHHHhhccccCCccEEEEecCCCcHHHHHHHh---ccCcc-ccccceEEEEEeCCCCChhH
Confidence 35666677787777655544322 34578999999999765444332 22110 11357999999888877643
No 210
>PF05436 MF_alpha_N: Mating factor alpha precursor N-terminus; InterPro: IPR008675 This entry contains the N-terminal regions of the Saccharomyces mating factor alpha precursor protein. All proteins in this family contain one or more copies of IPR006742 from INTERPRO further toward their C terminus.; GO: 0007618 mating, 0005576 extracellular region
Probab=30.08 E-value=56 Score=25.52 Aligned_cols=45 Identities=11% Similarity=0.201 Sum_probs=22.8
Q ss_pred cchhHHHHHHHHHHhhhcccchhhhhcCCCCCceee--EEEEecCCc
Q 012900 3 KLCGFVATLLFLVSLLFNGGAAARALNKNQDASEEW--GYVEVRPKA 47 (454)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s--Gyv~v~~~~ 47 (454)
|+..++.++.++++.+......-.......+.+.++ ||++.++..
T Consensus 2 Kf~siLsa~ala~~s~~a~~~~~~~~~~~~~iP~EAiiGyLDl~~d~ 48 (86)
T PF05436_consen 2 KFSSILSAAALASSSVAAAPVQTTTDDESANIPAEAIIGYLDLGGDN 48 (86)
T ss_pred chHHHHHHHHHHHHHhhcCCcccccccccccCCHHHHhceeccCCCC
Confidence 555555555555555442111111112223566666 999997653
No 211
>PF15253 STIL_N: SCL-interrupting locus protein N-terminus
Probab=29.94 E-value=55 Score=33.35 Aligned_cols=41 Identities=20% Similarity=0.578 Sum_probs=29.1
Q ss_pred cCCCCCceeeEEEEecCCceEEEEEEEcCCCCCCCCCC-CCEE-EEEcC
Q 012900 29 NKNQDASEEWGYVEVRPKAHMFWWLYKSPYRIENPSKP-WPII-LWLQG 75 (454)
Q Consensus 29 ~~~~~~~~~sGyv~v~~~~~lfywf~es~~~~~~p~~~-~Pli-lWlnG 75 (454)
+....+...+||++.+..+++.+ ..|+ ||+.. .||| +||.|
T Consensus 193 ~~~~~~~~k~GfLTmDqtRkl~l-Lles-----Dpk~~slPLVGiWlsG 235 (410)
T PF15253_consen 193 LSQVQGTYKSGFLTMDQTRKLLL-LLES-----DPKASSLPLVGIWLSG 235 (410)
T ss_pred ccccccccccceeeEccccceEE-Eecc-----CCCccCCCceeeEecC
Confidence 44556667889999999888887 6675 44332 2665 99996
No 212
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=29.89 E-value=2.1e+02 Score=30.60 Aligned_cols=49 Identities=18% Similarity=0.123 Sum_probs=37.8
Q ss_pred CceEEEEeccCCCCCChhhHHHHHHhcccccccccccCCceeeEeCCCceeeeEEEEEcCeEEEEEcCCcccccccCChh
Q 012900 365 GVNVTVYNGQLDVICSTKGTEAWIEKLKWDGLQKFLSTERTPLFCGNDKITKGFKKSYKNLHFYWILGAGHFKNYCDTWS 444 (454)
Q Consensus 365 ~irVLiy~Gd~D~i~n~~G~~~~i~~L~W~g~~~f~~a~~~~w~~~~~~~~~G~~k~~~nLtf~~V~~AGHmvP~dqP~~ 444 (454)
.+++|++.|..|-++|+..++...+.+. + -...++.++||+++.++|..
T Consensus 415 ~vPvLvV~G~~D~IvP~~sa~~l~~~i~--~-----------------------------~~~~vL~~sGHi~~ienPp~ 463 (532)
T TIGR01838 415 KVPVYIIATREDHIAPWQSAYRGAALLG--G-----------------------------PKTFVLGESGHIAGVVNPPS 463 (532)
T ss_pred CCCEEEEeeCCCCcCCHHHHHHHHHHCC--C-----------------------------CEEEEECCCCCchHhhCCCC
Confidence 5899999999999999988877665544 1 01134778999999998864
No 213
>PF07172 GRP: Glycine rich protein family; InterPro: IPR010800 This family consists of glycine rich proteins. Some of them may be involved in resistance to environmental stress [].
Probab=29.71 E-value=45 Score=26.68 Aligned_cols=18 Identities=33% Similarity=0.385 Sum_probs=7.7
Q ss_pred HHHHHHHHHhhhcccchh
Q 012900 8 VATLLFLVSLLFNGGAAA 25 (454)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~ 25 (454)
++.|+|++.||++...+|
T Consensus 8 lL~l~LA~lLlisSevaa 25 (95)
T PF07172_consen 8 LLGLLLAALLLISSEVAA 25 (95)
T ss_pred HHHHHHHHHHHHHhhhhh
Confidence 333444444555444443
No 214
>KOG3101 consensus Esterase D [General function prediction only]
Probab=29.59 E-value=53 Score=30.45 Aligned_cols=42 Identities=24% Similarity=0.137 Sum_probs=25.0
Q ss_pred CCCEEEEecccCcchhHHHHHHHHHHHHcCCceeeeeeeEecccCCCchhh
Q 012900 157 KSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWISPEDF 207 (454)
Q Consensus 157 ~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkGi~iGNg~~~p~~~ 207 (454)
..+.-|+|+|.|||=+-.++.+- .-..|++.--.|..+|...
T Consensus 140 ~~k~~IfGHSMGGhGAl~~~Lkn---------~~kykSvSAFAPI~NP~~c 181 (283)
T KOG3101|consen 140 PLKVGIFGHSMGGHGALTIYLKN---------PSKYKSVSAFAPICNPINC 181 (283)
T ss_pred chhcceeccccCCCceEEEEEcC---------cccccceeccccccCcccC
Confidence 34588999999999544333211 1135566555566666544
No 215
>PF00121 TIM: Triosephosphate isomerase; InterPro: IPR000652 Triosephosphate isomerase (5.3.1.1 from EC) (TIM) [] is the glycolytic enzyme that catalyses the reversible interconversion of glyceraldehyde 3-phosphate and dihydroxyacetone phosphate. TIM plays an important role in several metabolic pathways and is essential for efficient energy production. It is present in eukaryotes as well as in prokaryotes. TIM is a dimer of identical subunits, each of which is made up of about 250 amino-acid residues. A glutamic acid residue is involved in the catalytic mechanism [, ]. The tertiary structure of TIM has eight beta/alpha motifs folded into a barrel structure. The TIM barrel fold occurs ubiquitously and is found in numerous other enzymes that can be involved in energy metabolism, macromolecule metabolism, or small molecule metabolism []. The sequence around the active site residue is perfectly conserved in all known TIM's. Deficiencies in TIM are associated with haemolytic anaemia coupled with a progressive, severe neurological disorder [].; GO: 0004807 triose-phosphate isomerase activity, 0008152 metabolic process; PDB: 2YPI_A 1YPI_A 1NEY_B 1NF0_B 1I45_A 7TIM_A 3YPI_B 2H6R_H 2Y63_A 1N55_A ....
Probab=29.15 E-value=29 Score=32.88 Aligned_cols=63 Identities=17% Similarity=0.343 Sum_probs=43.4
Q ss_pred HHHHHHHHHHHHHHHHh-ccccCCCCEEEEecccCcchhHHHHHHHHHHHHcCCceeeeeeeEecccCCCchhh
Q 012900 135 VEAANDLTTLLMELFNK-NEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWISPEDF 207 (454)
Q Consensus 135 ~~~A~d~~~fL~~F~~~-fP~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkGi~iGNg~~~p~~~ 207 (454)
.+-++++..++++++.. |.+-..+++-|. |||.--|.-+..+.. ..++.|+.||.+-+++..+
T Consensus 177 ~~~~~~~~~~Ir~~l~~~~~~~~~~~~~IL---YGGSV~~~N~~~l~~-------~~~iDG~LVG~asl~~~~F 240 (244)
T PF00121_consen 177 PEQIQEVHAFIREILAELYGEEVANNIRIL---YGGSVNPENAAELLS-------QPDIDGVLVGGASLKAESF 240 (244)
T ss_dssp HHHHHHHHHHHHHHHHHHTHHHHHHHSEEE---EESSESTTTHHHHHT-------STT-SEEEESGGGGSTHHH
T ss_pred HHHHHHHHHHHHHHHHHhccccccCceeEE---ECCcCCcccHHHHhc-------CCCCCEEEEchhhhcccch
Confidence 45667799999998753 322223344444 889888887777754 2379999999999988643
No 216
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=28.99 E-value=2.5e+02 Score=26.83 Aligned_cols=88 Identities=15% Similarity=0.156 Sum_probs=54.5
Q ss_pred CEEEEEcCCCChhhhhhccccccCCCcccCCCCccchhccccceeecCCcccccCCccCCCCcccchHHHHHHHHHHHHH
Q 012900 68 PIILWLQGGPGASGVGIGNFEEVGPFDTYLKPRNSTWLKKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLME 147 (454)
Q Consensus 68 PlilWlnGGPGcSS~~~G~f~E~GP~~~~~~~n~~SW~~~anvLfiDqPvGtGfSy~~~~~~~~~~~~~~A~d~~~fL~~ 147 (454)
|.+++++++=|--.....|-.+.+|- .-++-++.| |-|. . .....+.++.|+.-.+.|+
T Consensus 1 ~pLF~fhp~~G~~~~~~~L~~~l~~~--------------~~v~~l~a~-g~~~--~---~~~~~~l~~~a~~yv~~Ir- 59 (257)
T COG3319 1 PPLFCFHPAGGSVLAYAPLAAALGPL--------------LPVYGLQAP-GYGA--G---EQPFASLDDMAAAYVAAIR- 59 (257)
T ss_pred CCEEEEcCCCCcHHHHHHHHHHhccC--------------ceeeccccC-cccc--c---ccccCCHHHHHHHHHHHHH-
Confidence 46788887655533212222333332 234556666 4432 1 1234577788886666665
Q ss_pred HHHhccccCCCCEEEEecccCcchhHHHHHHHHH
Q 012900 148 LFNKNEILQKSPLFIVAESYGGKFAATLGLAAVK 181 (454)
Q Consensus 148 F~~~fP~~~~~~~yi~GESYgG~yvP~lA~~i~~ 181 (454)
+..|+ -|.+|.|-|+||.-+=.+|.++..
T Consensus 60 --~~QP~---GPy~L~G~S~GG~vA~evA~qL~~ 88 (257)
T COG3319 60 --RVQPE---GPYVLLGWSLGGAVAFEVAAQLEA 88 (257)
T ss_pred --HhCCC---CCEEEEeeccccHHHHHHHHHHHh
Confidence 45776 499999999999988888888764
No 217
>PF03991 Prion_octapep: Copper binding octapeptide repeat; InterPro: IPR020949 Prion protein (PrP-c) [, , ] is a small glycoprotein found in high quantity in the brain of animals infected with certain degenerative neurological diseases, such as sheep scrapie and bovine spongiform encephalopathy (BSE), and the human dementias Creutzfeldt-Jacob disease (CJD) and Gerstmann-Straussler syndrome (GSS). PrP-c is encoded in the host genome and is expressed both in normal and infected cells. During infection, however, the PrP-c molecule become altered (conformationally rather than at the amino acid level) to an abnormal isoform, PrP-sc. In detergent-treated brain extracts from infected individuals, fibrils composed of polymers of PrP-sc, namely scrapie-associated fibrils or prion rods, can be evidenced by electron microscopy. The precise function of the normal PrP isoform in healthy individuals remains unknown. Several results, mainly obtained in transgenic animals, indicate that PrP-c might play a role in long-term potentiation, in sleep physiology, in oxidative burst compensation (PrP can fix four Cu2+ through its octarepeat domain), in interactions with the extracellular matrix (PrP-c can bind to the precursor of the laminin receptor, LRP), in apoptosis and in signal transduction (costimulation of PrP-c induces a modulation of Fyn kinase phosphorylation) []. The normal isoform, PrP-c, is anchored at the cell membrane, in rafts, through a glycosyl phosphatidyl inositol (GPI); its half-life at the cell surface is 5 h, after which the protein is internalised through a caveolae-dependent mechanism and degraded in the endolysosome compartment. Conversion between PrP-c and PrP-sc occurs likely during the internalisation process. This repeat is found at the amino terminus of mammalian prion proteins. It has been shown to bind to copper [].
Probab=28.45 E-value=31 Score=14.45 Aligned_cols=6 Identities=67% Similarity=1.863 Sum_probs=4.0
Q ss_pred CCCCCC
Q 012900 449 KGGQWG 454 (454)
Q Consensus 449 ~~~~~~ 454 (454)
.||.||
T Consensus 2 hgG~Wg 7 (8)
T PF03991_consen 2 HGGGWG 7 (8)
T ss_pred CCCcCC
Confidence 367776
No 218
>PRK06762 hypothetical protein; Provisional
Probab=28.33 E-value=34 Score=29.77 Aligned_cols=13 Identities=15% Similarity=0.593 Sum_probs=11.1
Q ss_pred CEEEEEcCCCChh
Q 012900 68 PIILWLQGGPGAS 80 (454)
Q Consensus 68 PlilWlnGGPGcS 80 (454)
|.+||+.|.|||-
T Consensus 2 ~~li~i~G~~GsG 14 (166)
T PRK06762 2 TTLIIIRGNSGSG 14 (166)
T ss_pred CeEEEEECCCCCC
Confidence 7899999988773
No 219
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=28.10 E-value=42 Score=29.73 Aligned_cols=26 Identities=31% Similarity=0.436 Sum_probs=21.9
Q ss_pred ccCCCCEEEEecccCcchhHHHHHHH
Q 012900 154 ILQKSPLFIVAESYGGKFAATLGLAA 179 (454)
Q Consensus 154 ~~~~~~~yi~GESYgG~yvP~lA~~i 179 (454)
.+..-|+.|-|.||||+....+|.++
T Consensus 85 ~l~~gpLi~GGkSmGGR~aSmvade~ 110 (213)
T COG3571 85 GLAEGPLIIGGKSMGGRVASMVADEL 110 (213)
T ss_pred cccCCceeeccccccchHHHHHHHhh
Confidence 34456999999999999999888766
No 220
>PF06309 Torsin: Torsin; InterPro: IPR010448 This family consists of several eukaryotic torsin proteins. Torsion dystonia is an autosomal dominant movement disorder characterised by involuntary, repetitive muscle contractions and twisted postures. The most severe early-onset form of dystonia has been linked to mutations in the human DYT1 (TOR1A) gene encoding a protein termed torsinA. While causative genetic alterations have been identified, the function of torsin proteins and the molecular mechanism underlying dystonia remain unknown. Phylogenetic analysis of the torsin protein family indicates these proteins share distant sequence similarity with the large and diverse family of AAA ATPase, central region containing proteins () proteins. It has been suggested that torsins play a role in effectively managing protein folding and that possible breakdown in a neuroprotective mechanism that is, in part, mediated by torsins may be responsible for the neuronal dysfunction associated with dystonia [].; GO: 0005524 ATP binding, 0051085 chaperone mediated protein folding requiring cofactor
Probab=28.00 E-value=49 Score=27.96 Aligned_cols=14 Identities=29% Similarity=0.577 Sum_probs=11.7
Q ss_pred CCEEEEEcCCCChh
Q 012900 67 WPIILWLQGGPGAS 80 (454)
Q Consensus 67 ~PlilWlnGGPGcS 80 (454)
+||||=|+|.||+-
T Consensus 52 KpLVlSfHG~tGtG 65 (127)
T PF06309_consen 52 KPLVLSFHGWTGTG 65 (127)
T ss_pred CCEEEEeecCCCCc
Confidence 49999999888763
No 221
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=27.82 E-value=55 Score=30.07 Aligned_cols=48 Identities=15% Similarity=0.067 Sum_probs=29.1
Q ss_pred CceEEEEeccCCCCCChhhHHHHHHhcccccccccccCCceeeEeCCCceeeeEEEEEcCeEEEEEcCCcccccccCCh
Q 012900 365 GVNVTVYNGQLDVICSTKGTEAWIEKLKWDGLQKFLSTERTPLFCGNDKITKGFKKSYKNLHFYWILGAGHFKNYCDTW 443 (454)
Q Consensus 365 ~irVLiy~Gd~D~i~n~~G~~~~i~~L~W~g~~~f~~a~~~~w~~~~~~~~~G~~k~~~nLtf~~V~~AGHmvP~dqP~ 443 (454)
.+++|-+.|..|.+++...++...+... . . .-+.....||.||...+.
T Consensus 161 ~iPtlHv~G~~D~~~~~~~s~~L~~~~~--------------------~----------~-~~v~~h~gGH~vP~~~~~ 208 (212)
T PF03959_consen 161 SIPTLHVIGENDPVVPPERSEALAEMFD--------------------P----------D-ARVIEHDGGHHVPRKKED 208 (212)
T ss_dssp --EEEEEEETT-SSS-HHHHHHHHHHHH--------------------H----------H-EEEEEESSSSS----HHH
T ss_pred CCCeEEEEeCCCCCcchHHHHHHHHhcc--------------------C----------C-cEEEEECCCCcCcCChhh
Confidence 5899999999999998777766665544 0 1 335577899999987654
No 222
>PF12532 DUF3732: Protein of unknown function (DUF3732); InterPro: IPR022205 This domain family is found in bacteria and eukaryotes, and is typically between 180 and 198 amino acids in length. There is a conserved DQP sequence motif.
Probab=27.15 E-value=90 Score=28.45 Aligned_cols=44 Identities=18% Similarity=0.443 Sum_probs=29.8
Q ss_pred ccceeecCCcccccCCccC-----CCCc--ccchHHHHHHHHHHHHHHHHh
Q 012900 108 ADLLFVDNPVGTGYSYVED-----NSSF--VKNDVEAANDLTTLLMELFNK 151 (454)
Q Consensus 108 anvLfiDqPvGtGfSy~~~-----~~~~--~~~~~~~A~d~~~fL~~F~~~ 151 (454)
-+.|+||||..|=|.-.+. .... ..+|..+.+.++.+|-.|.++
T Consensus 101 P~fL~lDQPSQvYfp~~~~~~~~~~~~~~~~d~D~~aV~~~F~~L~~~~~~ 151 (193)
T PF12532_consen 101 PSFLFLDQPSQVYFPSRDKSEDFDEEELRERDEDIAAVRKMFSLLADFIKE 151 (193)
T ss_pred CCeeeecCCCcCcCCCcccccccchhhccccchHHHHHHHHHHHHHHHHHH
Confidence 3899999999998887111 1111 335666777788888888764
No 223
>PLN02442 S-formylglutathione hydrolase
Probab=25.95 E-value=96 Score=29.86 Aligned_cols=30 Identities=17% Similarity=0.199 Sum_probs=22.5
Q ss_pred hcCceEEEEeccCCCCCChh-hHHHHHHhcc
Q 012900 363 AKGVNVTVYNGQLDVICSTK-GTEAWIEKLK 392 (454)
Q Consensus 363 ~~~irVLiy~Gd~D~i~n~~-G~~~~i~~L~ 392 (454)
..+.+||+.+|+.|.+|+.. .++.+.+.++
T Consensus 215 ~~~~pvli~~G~~D~~v~~~~~s~~~~~~l~ 245 (283)
T PLN02442 215 DVSATILIDQGEADKFLKEQLLPENFEEACK 245 (283)
T ss_pred ccCCCEEEEECCCCccccccccHHHHHHHHH
Confidence 34689999999999999863 4566655554
No 224
>KOG3411 consensus 40S ribosomal protein S19 [Translation, ribosomal structure and biogenesis]
Probab=25.77 E-value=37 Score=28.62 Aligned_cols=81 Identities=23% Similarity=0.421 Sum_probs=51.6
Q ss_pred ccccccCCCcccCCCCccchhccccc---eeecCCcccccC---Ccc------CCCCcccchHHHHHHHHHHHHH--HHH
Q 012900 85 GNFEEVGPFDTYLKPRNSTWLKKADL---LFVDNPVGTGYS---YVE------DNSSFVKNDVEAANDLTTLLME--LFN 150 (454)
Q Consensus 85 G~f~E~GP~~~~~~~n~~SW~~~anv---LfiDqPvGtGfS---y~~------~~~~~~~~~~~~A~d~~~fL~~--F~~ 150 (454)
|-+-|.-|+. -++=.+..|.+ ||+-.|+|+|+= |+. .++-+..+...+++.+++.|+. |.+
T Consensus 40 g~~kElAP~D-----~dWfytRaASiaRhiylR~~~gvg~~~KiYGg~krrGvrPsh~~~as~~i~rkvlQ~Le~~~~ve 114 (143)
T KOG3411|consen 40 GKGKELAPYD-----PDWYYTRAASIARHIYLRGPVGVGALTKIYGGSKRRGVRPSHFCDASGGIARKVLQALEKMGIVE 114 (143)
T ss_pred ccCcccCCCC-----ccHHHHHHHHHHHHHHhccccchhHHHHHhcccccCCCCChhhhccccHHHHHHHHHHHhCCcee
Confidence 3444555543 23445666665 899999999953 211 1233455678899999999987 677
Q ss_pred hccccCCCCEEEEecccCcchhHHHHHHHHHHH
Q 012900 151 KNEILQKSPLFIVAESYGGKFAATLGLAAVKAI 183 (454)
Q Consensus 151 ~fP~~~~~~~yi~GESYgG~yvP~lA~~i~~~~ 183 (454)
++|+ ||+.+..-.++.++++
T Consensus 115 ~hp~-------------gGR~lt~~GqrdldrI 134 (143)
T KOG3411|consen 115 KHPK-------------GGRRLTEQGQRDLDRI 134 (143)
T ss_pred eCCC-------------CcceeCcccchhHHHH
Confidence 7887 5666666666655543
No 225
>PF07389 DUF1500: Protein of unknown function (DUF1500); InterPro: IPR009974 This family consists of several Orthopoxvirus specific proteins, which include Vaccinia virus, B6 protein, they are around 100 residues in length. The function of this family is unknown.
Probab=25.66 E-value=56 Score=25.45 Aligned_cols=28 Identities=7% Similarity=0.150 Sum_probs=21.5
Q ss_pred HHHHHHHHHHHHhccccCCCCEEEEecccC
Q 012900 139 NDLTTLLMELFNKNEILQKSPLFIVAESYG 168 (454)
Q Consensus 139 ~d~~~fL~~F~~~fP~~~~~~~yi~GESYg 168 (454)
-|+|.+.+.|+-+| |-.+.|.+.|+||+
T Consensus 7 vdIYDAvRaflLr~--Y~~KrfIV~g~S~~ 34 (100)
T PF07389_consen 7 VDIYDAVRAFLLRH--YYDKRFIVYGRSNA 34 (100)
T ss_pred hhHHHHHHHHHHHH--HccceEEEecchHH
Confidence 35777777777655 55789999999995
No 226
>PF01583 APS_kinase: Adenylylsulphate kinase; InterPro: IPR002891 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This domain contains an ATP binding P-loop motif [].; GO: 0005524 ATP binding, 0016301 kinase activity, 0016772 transferase activity, transferring phosphorus-containing groups, 0000103 sulfate assimilation; PDB: 1M7H_B 1M7G_B 3CR7_B 1D6J_A 2OFW_G 1X6V_B 1XNJ_A 1XJQ_B 2PEY_A 2PEZ_B ....
Probab=25.43 E-value=41 Score=29.51 Aligned_cols=13 Identities=31% Similarity=0.777 Sum_probs=9.3
Q ss_pred CCEEEEEcCCCCh
Q 012900 67 WPIILWLQGGPGA 79 (454)
Q Consensus 67 ~PlilWlnGGPGc 79 (454)
+|.+|||+|=||+
T Consensus 1 ~g~vIwltGlsGs 13 (156)
T PF01583_consen 1 KGFVIWLTGLSGS 13 (156)
T ss_dssp S-EEEEEESSTTS
T ss_pred CCEEEEEECCCCC
Confidence 3899999986654
No 227
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=25.03 E-value=1.1e+02 Score=29.25 Aligned_cols=62 Identities=13% Similarity=-0.084 Sum_probs=36.2
Q ss_pred HHhhcCceEEEEeccCCCCCChhhHHHHHHhcccccccccccCCceeeEeCCCceeeeEEEEEcCeEEEEEcCCcccccc
Q 012900 360 ELLAKGVNVTVYNGQLDVICSTKGTEAWIEKLKWDGLQKFLSTERTPLFCGNDKITKGFKKSYKNLHFYWILGAGHFKNY 439 (454)
Q Consensus 360 ~LL~~~irVLiy~Gd~D~i~n~~G~~~~i~~L~W~g~~~f~~a~~~~w~~~~~~~~~G~~k~~~nLtf~~V~~AGHmvP~ 439 (454)
.|..-+.++|+..|+.|... ..+.+.+.-. ..|+. -+ ...+.+.+++.+|||.+..
T Consensus 202 ~l~~~~~P~ll~~g~~D~~~-----~~~~~~~~~~--~~~~~----~l-------------~~~~v~~~~~~~~~H~l~~ 257 (274)
T TIGR03100 202 GLERFQGPVLFILSGNDLTA-----QEFADSVLGE--PAWRG----AL-------------EDPGIERVEIDGADHTFSD 257 (274)
T ss_pred HHHhcCCcEEEEEcCcchhH-----HHHHHHhccC--hhhHH----Hh-------------hcCCeEEEecCCCCccccc
Confidence 34345799999999999862 3444332211 11100 00 0136788999999999855
Q ss_pred cCC-hhh
Q 012900 440 CDT-WSG 445 (454)
Q Consensus 440 dqP-~~~ 445 (454)
+.+ +..
T Consensus 258 e~~~~~v 264 (274)
T TIGR03100 258 RVWREWV 264 (274)
T ss_pred HHHHHHH
Confidence 544 443
No 228
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=23.90 E-value=71 Score=29.78 Aligned_cols=27 Identities=15% Similarity=0.377 Sum_probs=22.8
Q ss_pred CceEEEEeccCCCCCChhhHHHHHHhc
Q 012900 365 GVNVTVYNGQLDVICSTKGTEAWIEKL 391 (454)
Q Consensus 365 ~irVLiy~Gd~D~i~n~~G~~~~i~~L 391 (454)
+++++|++|+.|..|+....++.++++
T Consensus 169 ~~P~~v~hG~~D~tV~~~n~~~~~~q~ 195 (220)
T PF10503_consen 169 GYPRIVFHGTADTTVNPQNADQLVAQW 195 (220)
T ss_pred CCCEEEEecCCCCccCcchHHHHHHHH
Confidence 568899999999999998887777653
No 229
>PRK13962 bifunctional phosphoglycerate kinase/triosephosphate isomerase; Provisional
Probab=23.69 E-value=1.4e+02 Score=32.69 Aligned_cols=62 Identities=15% Similarity=0.267 Sum_probs=45.1
Q ss_pred HHHHHHHHHHHHHHHHh-ccccCCCCEEEEecccCcchhHHHHHHHHHHHHcCCceeeeeeeEecccCCCchh
Q 012900 135 VEAANDLTTLLMELFNK-NEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWISPED 206 (454)
Q Consensus 135 ~~~A~d~~~fL~~F~~~-fP~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkGi~iGNg~~~p~~ 206 (454)
.+.|++++.++++++.. +-.-....+-|. |||.--|.-+..|... -++.|+.||..-+++..
T Consensus 574 ~e~aqevh~~IR~~l~~~~~~~~a~~~rIl---YGGSV~~~N~~~l~~~-------~diDG~LVGgASL~~~~ 636 (645)
T PRK13962 574 PEQAQEVHAFIRKLVAELYGEEAARKVRIL---YGGSVKSENAAGLFNQ-------PDIDGGLVGGASLKAQE 636 (645)
T ss_pred HHHHHHHHHHHHHHHHHHhChhhhccceEE---ecCCCCHhHHHHHhcC-------CCCCeEEeehHhcCHHH
Confidence 45677799999999853 322212234444 9999999999888652 37999999999998754
No 230
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=23.52 E-value=1.5e+02 Score=26.30 Aligned_cols=27 Identities=11% Similarity=0.081 Sum_probs=22.3
Q ss_pred ceEEEEeccCCCCCChhhHHHHHHhcc
Q 012900 366 VNVTVYNGQLDVICSTKGTEAWIEKLK 392 (454)
Q Consensus 366 irVLiy~Gd~D~i~n~~G~~~~i~~L~ 392 (454)
++.+++.++.|..||+.-++.+.+.++
T Consensus 115 ~~~~viaS~nDp~vp~~~a~~~A~~l~ 141 (171)
T PF06821_consen 115 FPSIVIASDNDPYVPFERAQRLAQRLG 141 (171)
T ss_dssp CCEEEEEETTBSSS-HHHHHHHHHHHT
T ss_pred CCeEEEEcCCCCccCHHHHHHHHHHcC
Confidence 455899999999999998888888776
No 231
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=23.03 E-value=79 Score=28.80 Aligned_cols=42 Identities=21% Similarity=0.342 Sum_probs=30.4
Q ss_pred hHHHHHHHHHHHHHHHHhccccCCCCEEEEecccCcchhHHHH
Q 012900 134 DVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLG 176 (454)
Q Consensus 134 ~~~~A~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~lA 176 (454)
.+.+.+++..++ .++...|+....++-++|-|+||+++-.+|
T Consensus 75 ~~~~~~~~~aa~-~~l~~~~~~~~~kig~vGfc~GG~~a~~~a 116 (218)
T PF01738_consen 75 PEQVAADLQAAV-DYLRAQPEVDPGKIGVVGFCWGGKLALLLA 116 (218)
T ss_dssp HHHHHHHHHHHH-HHHHCTTTCEEEEEEEEEETHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-HHHHhccccCCCcEEEEEEecchHHhhhhh
Confidence 345556664444 466677766678999999999999887666
No 232
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=22.88 E-value=1.5e+02 Score=27.65 Aligned_cols=39 Identities=18% Similarity=0.192 Sum_probs=25.9
Q ss_pred HHHHHHHHHHHHHHHHhc--cccCCCCEEEEecccCcchhH
Q 012900 135 VEAANDLTTLLMELFNKN--EILQKSPLFIVAESYGGKFAA 173 (454)
Q Consensus 135 ~~~A~d~~~fL~~F~~~f--P~~~~~~~yi~GESYgG~yvP 173 (454)
.+.++.+.+.++...+.+ ..-..+++.|.|+|.||.-+-
T Consensus 60 ~~q~~~~~~~i~~i~~~~~~~~~~~~~vilVgHSmGGlvar 100 (225)
T PF07819_consen 60 QRQAEFLAEAIKYILELYKSNRPPPRSVILVGHSMGGLVAR 100 (225)
T ss_pred HHHHHHHHHHHHHHHHhhhhccCCCCceEEEEEchhhHHHH
Confidence 345566666666666554 222468899999999997433
No 233
>COG3150 Predicted esterase [General function prediction only]
Probab=22.76 E-value=1.6e+02 Score=26.35 Aligned_cols=61 Identities=21% Similarity=0.332 Sum_probs=42.0
Q ss_pred ccchHHHHHHHHHHHHHHHHhccccCCCCEEEEecccCcchhHHHHHHHHHHHHcCCceeeeeeeEecccCCCchhhhhh
Q 012900 131 VKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWISPEDFVFS 210 (454)
Q Consensus 131 ~~~~~~~A~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkGi~iGNg~~~p~~~~~~ 210 (454)
.....++++.+-..++ ++..+..-|.|-|-||.|+--|+.+- -|+.+ |-||-+-|...+..
T Consensus 39 ~h~p~~a~~ele~~i~-------~~~~~~p~ivGssLGGY~At~l~~~~-----------Girav-~~NPav~P~e~l~g 99 (191)
T COG3150 39 PHDPQQALKELEKAVQ-------ELGDESPLIVGSSLGGYYATWLGFLC-----------GIRAV-VFNPAVRPYELLTG 99 (191)
T ss_pred CCCHHHHHHHHHHHHH-------HcCCCCceEEeecchHHHHHHHHHHh-----------CChhh-hcCCCcCchhhhhh
Confidence 4456677777766665 45567788999999999988877432 34554 44888877655443
No 234
>PLN03082 Iron-sulfur cluster assembly; Provisional
Probab=22.01 E-value=55 Score=28.96 Aligned_cols=57 Identities=16% Similarity=0.125 Sum_probs=39.4
Q ss_pred CCEEEEEcCCCChhhhhhccccccCC--Cc--cc-------CCCCccchhccccceeecCCcccccCCc
Q 012900 67 WPIILWLQGGPGASGVGIGNFEEVGP--FD--TY-------LKPRNSTWLKKADLLFVDNPVGTGYSYV 124 (454)
Q Consensus 67 ~PlilWlnGGPGcSS~~~G~f~E~GP--~~--~~-------~~~n~~SW~~~anvLfiDqPvGtGfSy~ 124 (454)
.+|=|-+.|| |||++.+++=.+.-| -. +. ..+....+-+-+.|=|+|...|.||-+.
T Consensus 78 ~~LRl~V~~g-GCSG~~Y~~~ld~~~~~~D~v~e~~Gv~vvVD~~s~~~L~Gs~IDYve~l~~~gF~f~ 145 (163)
T PLN03082 78 KMLRLSVETG-GCSGFQYVFELDDKTNSDDRVFEKDGVKLVVDNISYDFVKGATVDYVEELIRSAFVVS 145 (163)
T ss_pred ceEEEEEecC-CCCCceeeeEEccCCCCCCEEEecCCeEEEECHHHHHHhCCCEEEeecCCCCCeeEEe
Confidence 4799999988 999986655443322 11 11 2233456778888999999999999873
No 235
>PF08060 NOSIC: NOSIC (NUC001) domain; InterPro: IPR012976 This is the central domain in Nop56/SIK1-like proteins [].; PDB: 3PLA_K 3ICX_B 3ID6_A 3ID5_E 3NVM_A 3NMU_B 2NNW_C 3NVI_A 3NVK_A 2OZB_E ....
Probab=21.83 E-value=91 Score=21.82 Aligned_cols=21 Identities=24% Similarity=0.197 Sum_probs=16.2
Q ss_pred HHHHHHHHHHHHHHH-hccccC
Q 012900 136 EAANDLTTLLMELFN-KNEILQ 156 (454)
Q Consensus 136 ~~A~d~~~fL~~F~~-~fP~~~ 156 (454)
..-..++.+++.||. +|||+.
T Consensus 14 ~ei~~~~~~lre~Y~~~FPEL~ 35 (53)
T PF08060_consen 14 KEINLLHMRLREWYSWHFPELE 35 (53)
T ss_dssp HHHHHHHHHHHHHHTTTSTTHH
T ss_pred HHHHHHHHHHHHHHHccchhHH
Confidence 344558899999997 699974
No 236
>PF04414 tRNA_deacylase: D-aminoacyl-tRNA deacylase; InterPro: IPR007508 D-aminoacyl-tRNA deacylases hydrolyse the ester bond between the polynucleotide and the D-amino acid, thereby preventing the accumulation of such mis-acylated and metabolically inactive tRNA molecules. Several aminoacyl-tRNA synthetases have the ability to transfer the D-isomer of their amino acid onto their cognate tRNA. ; GO: 0016788 hydrolase activity, acting on ester bonds; PDB: 1YQE_A 2GFQ_B.
Probab=21.55 E-value=2.2e+02 Score=26.43 Aligned_cols=100 Identities=21% Similarity=0.330 Sum_probs=53.5
Q ss_pred CEEEEEcCCCChhhhhhccccccCCCccc--------C---CCCc---------cc-hhccccceeecCCcccccCCccC
Q 012900 68 PIILWLQGGPGASGVGIGNFEEVGPFDTY--------L---KPRN---------ST-WLKKADLLFVDNPVGTGYSYVED 126 (454)
Q Consensus 68 PlilWlnGGPGcSS~~~G~f~E~GP~~~~--------~---~~n~---------~S-W~~~anvLfiDqPvGtGfSy~~~ 126 (454)
=|++=..|-||-..+| |--.|++|..-. + .+.+ |+ ..-..=.+||| +|.
T Consensus 30 ~LTvH~tGN~~~a~~G-G~p~~la~a~P~~~~~~l~~l~~~~~e~y~v~~EaTHHGPt~~~~Ps~FvE--IGS------- 99 (213)
T PF04414_consen 30 SLTVHTTGNFGEAEYG-GKPGELAPANPRLMKALLRALKKHAPEGYEVSYEATHHGPTDLSVPSVFVE--IGS------- 99 (213)
T ss_dssp EEEEE--EESS--TTS-S-TTEE-BB-HHHHHHHHHHHHHHGGCT-EEEE--S-SS-----SBEEEEE--EEE-------
T ss_pred eEEEeCCCCCCccccC-CCCCccccCCHHHHHHHHHHHHHhccCCCEEEEEeeccCCCCCCCCcEEEE--eCC-------
Confidence 5889999999988776 888888887521 0 0001 11 11222344544 111
Q ss_pred CCCcccchHHHHHHHHHHHHHHHHhccccC-CCCEEEEecccCcchhHHHHHHHHH
Q 012900 127 NSSFVKNDVEAANDLTTLLMELFNKNEILQ-KSPLFIVAESYGGKFAATLGLAAVK 181 (454)
Q Consensus 127 ~~~~~~~~~~~A~d~~~fL~~F~~~fP~~~-~~~~yi~GESYgG~yvP~lA~~i~~ 181 (454)
+....+++.+++-+.+.+.+.+..-++-. ..++.-+| ||||+|.+...+++
T Consensus 100 -te~eW~d~~a~~~vA~avl~~~~~~~~~~~~~~~ig~G---G~HYapr~t~~~l~ 151 (213)
T PF04414_consen 100 -TEEEWNDPDAAEAVARAVLEVLESDEKAECCPVAIGFG---GGHYAPRFTKLALE 151 (213)
T ss_dssp -SHHHHT-HHHHHHHHHHHHHHHHHTTCSTT-EEEEEE----S-TT-HHHHHHHHH
T ss_pred -CHHHhCChHHHHHHHHHHHHHhcccccccccceeEEec---Ccccchhhhhhhhc
Confidence 12356788899989999988887655432 14555566 79999999887765
No 237
>COG0149 TpiA Triosephosphate isomerase [Carbohydrate transport and metabolism]
Probab=21.31 E-value=2.5e+02 Score=26.73 Aligned_cols=69 Identities=19% Similarity=0.360 Sum_probs=49.4
Q ss_pred cccccCCccCCCCcccchHHHHHHHHHHHHHHHHh-ccccCCCCEEEEecccCcchhHHHHHHHHHHHHcCCceeeeeee
Q 012900 117 VGTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNK-NEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGV 195 (454)
Q Consensus 117 vGtGfSy~~~~~~~~~~~~~~A~d~~~fL~~F~~~-fP~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkGi 195 (454)
+|||-|- +.+-++.+..|++..... |.+= ..+-|- |||--=|.=+.++.. +.++.|+
T Consensus 171 IGTG~~a----------t~~~a~~v~~~Ir~~~~~~~~~~--~~v~Il---YGGSV~~~N~~e~~~-------~~~idG~ 228 (251)
T COG0149 171 IGTGKSA----------SPADAEEVHAFIRAVLAELFGAE--EKVRIL---YGGSVKPGNAAELAA-------QPDIDGA 228 (251)
T ss_pred hcCCCCC----------CHHHHHHHHHHHHHHHHHhcCCC--CCeEEE---EeCCcChhHHHHHhc-------CCCCCeE
Confidence 6999773 334567788999988764 4432 455555 888888877777654 3489999
Q ss_pred EecccCCCchhh
Q 012900 196 ALGDSWISPEDF 207 (454)
Q Consensus 196 ~iGNg~~~p~~~ 207 (454)
.||.+-+.+.++
T Consensus 229 LVGgAslka~~f 240 (251)
T COG0149 229 LVGGASLKADDF 240 (251)
T ss_pred EEcceeecchhH
Confidence 999999987543
No 238
>PF14020 DUF4236: Protein of unknown function (DUF4236)
Probab=21.04 E-value=48 Score=23.58 Aligned_cols=14 Identities=50% Similarity=0.627 Sum_probs=10.5
Q ss_pred ceeecCCcccccCCc
Q 012900 110 LLFVDNPVGTGYSYV 124 (454)
Q Consensus 110 vLfiDqPvGtGfSy~ 124 (454)
.+-++-| |+|+||.
T Consensus 41 ~~t~~iP-GtGlsyr 54 (55)
T PF14020_consen 41 RTTVGIP-GTGLSYR 54 (55)
T ss_pred EEEEEcC-CCccEEe
Confidence 3567778 9999984
No 239
>PRK15492 triosephosphate isomerase; Provisional
Probab=20.75 E-value=2e+02 Score=27.53 Aligned_cols=60 Identities=13% Similarity=0.174 Sum_probs=44.2
Q ss_pred HHHHHHHHHHHHHHH-hccccCCCCEEEEecccCcchhHHHHHHHHHHHHcCCceeeeeeeEecccCCCchh
Q 012900 136 EAANDLTTLLMELFN-KNEILQKSPLFIVAESYGGKFAATLGLAAVKAIEAGKLKLKLGGVALGDSWISPED 206 (454)
Q Consensus 136 ~~A~d~~~fL~~F~~-~fP~~~~~~~yi~GESYgG~yvP~lA~~i~~~~~~~~~~inLkGi~iGNg~~~p~~ 206 (454)
+-+++..+++++++. .+-+- ...+-|. |||---|.-+..|... -++.|+.||..-++|..
T Consensus 189 e~~~~~~~~Ir~~l~~~~~~~-~~~irIL---YGGSV~~~N~~~l~~~-------~diDG~LvG~aSl~~~~ 249 (260)
T PRK15492 189 DYADEKHAVIKQCLIELFGDA-GDDIPVF---YGGSVNAENANELFGQ-------PHIDGLFIGRSAWDADK 249 (260)
T ss_pred HHHHHHHHHHHHHHHHHhccc-cCceeEE---EcCccCHHHHHHHhcC-------CCCCEEEeehhhcCHHH
Confidence 444668899999864 34322 3355555 9999999999888652 37999999999998754
No 240
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=20.54 E-value=1.2e+02 Score=27.70 Aligned_cols=55 Identities=20% Similarity=0.246 Sum_probs=34.0
Q ss_pred ccccCCccCCCCcccchHHHHHHHHHHHHHHHHhccccCCCCEEEEecccCcchhHHHHHHH
Q 012900 118 GTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAA 179 (454)
Q Consensus 118 GtGfSy~~~~~~~~~~~~~~A~d~~~fL~~F~~~fP~~~~~~~yi~GESYgG~yvP~lA~~i 179 (454)
|||-|-++-+.. ..+.+-|......++ .+||+- .-++++|-|+|+..+-.+|.+.
T Consensus 70 gVG~S~G~fD~G--iGE~~Da~aaldW~~---~~hp~s--~~~~l~GfSFGa~Ia~~la~r~ 124 (210)
T COG2945 70 GVGRSQGEFDNG--IGELEDAAAALDWLQ---ARHPDS--ASCWLAGFSFGAYIAMQLAMRR 124 (210)
T ss_pred ccccccCcccCC--cchHHHHHHHHHHHH---hhCCCc--hhhhhcccchHHHHHHHHHHhc
Confidence 999888763322 123333333333333 368884 3379999999987777766654
Done!