Query 012902
Match_columns 454
No_of_seqs 440 out of 1178
Neff 10.9
Searched_HMMs 46136
Date Fri Mar 29 07:30:18 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012902.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/012902hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG2814 AraJ Arabinose efflux 100.0 7.6E-44 1.7E-48 322.1 38.0 381 41-452 11-391 (394)
2 COG2271 UhpC Sugar phosphate p 100.0 1E-44 2.2E-49 322.6 29.3 402 36-448 21-435 (448)
3 PRK11663 regulatory protein Uh 100.0 1.1E-42 2.4E-47 334.5 38.0 405 41-452 20-429 (434)
4 PRK09556 uhpT sugar phosphate 100.0 8.4E-43 1.8E-47 338.5 32.8 397 39-446 24-448 (467)
5 PRK03545 putative arabinose tr 100.0 3.7E-41 8E-46 320.1 40.0 359 60-448 23-381 (390)
6 TIGR02332 HpaX 4-hydroxyphenyl 100.0 3.2E-41 7E-46 321.7 35.3 384 40-436 4-410 (412)
7 TIGR00893 2A0114 d-galactonate 100.0 5.6E-40 1.2E-44 313.4 36.2 386 57-445 5-397 (399)
8 TIGR00894 2A0114euk Na(+)-depe 100.0 8.6E-40 1.9E-44 318.0 37.6 408 39-448 14-451 (465)
9 PRK11273 glpT sn-glycerol-3-ph 100.0 2.9E-39 6.4E-44 312.4 39.9 400 41-447 26-435 (452)
10 TIGR00903 2A0129 major facilit 100.0 5.1E-39 1.1E-43 300.2 35.3 359 58-444 3-362 (368)
11 PRK11551 putative 3-hydroxyphe 100.0 7.1E-39 1.5E-43 306.6 37.2 382 40-448 11-397 (406)
12 PRK09705 cynX putative cyanate 100.0 8.7E-39 1.9E-43 303.4 37.5 357 63-451 26-385 (393)
13 PRK14995 methyl viologen resis 100.0 1.1E-38 2.4E-43 311.4 37.0 368 43-422 5-413 (495)
14 PRK10213 nepI ribonucleoside t 100.0 5.7E-38 1.2E-42 297.6 40.0 365 43-441 20-385 (394)
15 PRK03699 putative transporter; 100.0 2.5E-38 5.3E-43 300.9 37.0 376 41-447 4-380 (394)
16 PRK10406 alpha-ketoglutarate t 100.0 2.9E-38 6.3E-43 303.8 37.5 380 45-452 23-429 (432)
17 KOG2532 Permease of the major 100.0 1.2E-38 2.6E-43 301.2 33.3 376 73-448 65-448 (466)
18 TIGR00712 glpT glycerol-3-phos 100.0 2.8E-38 6E-43 304.5 36.1 404 42-452 25-438 (438)
19 PRK10091 MFS transport protein 100.0 4.9E-38 1.1E-42 297.6 37.1 364 57-450 14-379 (382)
20 PRK15402 multidrug efflux syst 100.0 2.4E-37 5.1E-42 295.8 40.5 381 43-446 10-394 (406)
21 TIGR00890 2A0111 Oxalate/Forma 100.0 2.7E-38 5.9E-43 299.7 31.3 360 58-440 15-375 (377)
22 PRK10642 proline/glycine betai 100.0 2.2E-37 4.8E-42 302.0 36.9 389 43-446 15-429 (490)
23 PLN00028 nitrate transmembrane 100.0 4.1E-37 8.9E-42 298.4 38.3 388 44-447 36-433 (476)
24 PRK12307 putative sialic acid 100.0 1.9E-37 4.1E-42 298.6 34.8 380 37-434 11-395 (426)
25 TIGR00891 2A0112 putative sial 100.0 2.1E-37 4.5E-42 296.6 33.8 379 40-431 8-400 (405)
26 TIGR01299 synapt_SV2 synaptic 100.0 4.6E-37 1E-41 305.0 36.9 394 41-451 164-737 (742)
27 COG2223 NarK Nitrate/nitrite t 100.0 1.6E-37 3.5E-42 277.4 28.9 386 39-450 9-404 (417)
28 PRK15034 nitrate/nitrite trans 100.0 2.4E-36 5.2E-41 283.6 36.9 377 42-451 32-458 (462)
29 PRK09952 shikimate transporter 100.0 2.2E-36 4.8E-41 290.8 37.6 387 41-448 19-434 (438)
30 TIGR00881 2A0104 phosphoglycer 100.0 9.9E-38 2.1E-42 296.0 26.7 367 57-429 6-379 (379)
31 TIGR00897 2A0118 polyol permea 100.0 3.8E-36 8.2E-41 286.6 37.5 361 65-446 32-400 (402)
32 PRK15403 multidrug efflux syst 100.0 5.9E-36 1.3E-40 285.4 38.5 367 52-439 22-389 (413)
33 TIGR00710 efflux_Bcr_CflA drug 100.0 7.2E-36 1.6E-40 284.0 38.3 345 57-425 16-364 (385)
34 TIGR00711 efflux_EmrB drug res 100.0 1.1E-36 2.4E-41 298.4 33.2 362 47-422 5-410 (485)
35 PRK10504 putative transporter; 100.0 9.2E-36 2E-40 290.5 39.1 366 49-426 15-419 (471)
36 TIGR00899 2A0120 sugar efflux 100.0 7.2E-36 1.6E-40 283.0 36.8 361 57-446 8-373 (375)
37 PRK15075 citrate-proton sympor 100.0 1.2E-35 2.7E-40 285.8 36.5 361 41-425 12-397 (434)
38 TIGR00879 SP MFS transporter, 100.0 3.1E-36 6.7E-41 295.0 32.7 387 56-451 38-474 (481)
39 PRK05122 major facilitator sup 100.0 1.5E-35 3.4E-40 282.8 35.9 361 57-451 26-393 (399)
40 TIGR00892 2A0113 monocarboxyla 100.0 3.8E-36 8.3E-41 290.1 32.0 389 41-441 16-415 (455)
41 PRK03633 putative MFS family t 100.0 5E-35 1.1E-39 277.1 37.4 361 47-445 9-370 (381)
42 PRK10077 xylE D-xylose transpo 100.0 1.7E-35 3.7E-40 289.4 35.3 399 42-451 10-461 (479)
43 PRK10133 L-fucose transporter; 100.0 4.4E-35 9.6E-40 280.7 37.1 368 47-442 29-428 (438)
44 PRK12382 putative transporter; 100.0 8.4E-35 1.8E-39 276.9 36.5 356 57-448 26-390 (392)
45 PRK09874 drug efflux system pr 100.0 1.1E-34 2.5E-39 277.9 37.6 367 57-450 25-401 (408)
46 PRK11102 bicyclomycin/multidru 100.0 7.5E-35 1.6E-39 276.1 35.4 370 60-451 5-376 (377)
47 PF07690 MFS_1: Major Facilita 100.0 3.6E-36 7.8E-41 282.5 24.8 342 57-413 7-352 (352)
48 TIGR00900 2A0121 H+ Antiporter 100.0 5.8E-35 1.3E-39 275.6 32.9 352 57-424 10-365 (365)
49 PRK03893 putative sialic acid 100.0 3.9E-35 8.4E-40 288.1 32.6 388 41-441 17-447 (496)
50 PRK11652 emrD multidrug resist 100.0 4.8E-34 1E-38 271.9 38.2 356 43-426 7-364 (394)
51 PRK10489 enterobactin exporter 100.0 4.7E-35 1E-39 280.8 31.4 363 58-446 29-398 (417)
52 PRK11043 putative transporter; 100.0 4.3E-34 9.4E-39 272.9 37.3 348 58-431 18-366 (401)
53 TIGR00887 2A0109 phosphate:H+ 100.0 3E-34 6.5E-39 281.1 37.0 395 43-451 15-492 (502)
54 TIGR00895 2A0115 benzoate tran 100.0 1.4E-34 3.1E-39 276.3 31.6 366 41-419 14-397 (398)
55 PRK11195 lysophospholipid tran 100.0 5.6E-34 1.2E-38 270.2 34.5 363 57-446 14-379 (393)
56 PRK10473 multidrug efflux syst 100.0 2.2E-33 4.8E-38 267.2 38.2 349 57-436 14-363 (392)
57 PRK11646 multidrug resistance 100.0 1.8E-33 3.9E-38 267.4 36.1 360 60-449 24-390 (400)
58 PRK15011 sugar efflux transpor 100.0 4.8E-33 1E-37 264.4 37.8 358 58-446 27-390 (393)
59 PRK10054 putative transporter; 100.0 2.4E-33 5.2E-38 266.0 34.0 358 58-444 19-381 (395)
60 PRK11010 ampG muropeptide tran 100.0 9.3E-33 2E-37 268.4 37.7 381 43-447 12-403 (491)
61 TIGR00898 2A0119 cation transp 100.0 9.2E-34 2E-38 278.9 30.7 361 67-446 110-494 (505)
62 TIGR00902 2A0127 phenyl propri 100.0 7.8E-33 1.7E-37 261.9 35.6 354 57-442 15-374 (382)
63 KOG1330 Sugar transporter/spin 100.0 4.2E-35 9.2E-40 263.8 18.3 374 44-426 33-417 (493)
64 cd06174 MFS The Major Facilita 100.0 1.2E-32 2.6E-37 258.4 34.9 338 57-444 10-349 (352)
65 TIGR00885 fucP L-fucose:H+ sym 100.0 2E-32 4.3E-37 260.1 35.5 353 57-439 14-404 (410)
66 TIGR00886 2A0108 nitrite extru 100.0 4.2E-33 9.1E-38 263.1 30.3 341 57-409 12-366 (366)
67 TIGR00883 2A0106 metabolite-pr 100.0 6.6E-33 1.4E-37 264.4 30.7 359 57-437 4-391 (394)
68 TIGR00896 CynX cyanate transpo 100.0 1.9E-32 4.1E-37 257.2 31.8 331 63-424 17-350 (355)
69 PRK11128 putative 3-phenylprop 100.0 3.7E-31 7.9E-36 250.7 35.3 352 58-441 16-373 (382)
70 KOG3764 Vesicular amine transp 100.0 6.4E-33 1.4E-37 244.2 18.1 344 78-447 103-454 (464)
71 KOG2504 Monocarboxylate transp 100.0 1.5E-31 3.2E-36 256.3 27.4 395 40-447 42-476 (509)
72 KOG2533 Permease of the major 100.0 1.8E-31 4E-36 252.9 26.6 268 57-326 56-336 (495)
73 PRK09528 lacY galactoside perm 100.0 1.2E-30 2.7E-35 250.4 31.9 372 58-449 22-405 (420)
74 PRK11902 ampG muropeptide tran 100.0 1.3E-29 2.9E-34 241.7 38.0 368 57-448 10-391 (402)
75 COG2807 CynX Cyanate permease 100.0 2.4E-29 5.3E-34 220.0 33.3 360 60-450 26-388 (395)
76 TIGR00805 oat sodium-independe 100.0 1.1E-30 2.4E-35 259.2 27.0 273 57-329 44-397 (633)
77 TIGR00882 2A0105 oligosacchari 100.0 1.9E-29 4.2E-34 240.3 34.1 366 58-444 14-392 (396)
78 KOG0569 Permease of the major 100.0 3.9E-29 8.4E-34 233.7 34.9 404 45-453 10-460 (485)
79 PRK06814 acylglycerophosphoeth 100.0 8.3E-30 1.8E-34 273.7 34.6 370 57-440 26-415 (1140)
80 TIGR00889 2A0110 nucleoside tr 100.0 5.7E-29 1.2E-33 237.4 35.6 364 58-450 14-405 (418)
81 PF05977 MFS_3: Transmembrane 100.0 5E-29 1.1E-33 240.1 35.0 369 57-446 21-393 (524)
82 TIGR00901 2A0125 AmpG-related 100.0 2.3E-29 5.1E-34 236.4 30.7 322 63-406 5-355 (356)
83 COG0738 FucP Fucose permease [ 100.0 9.7E-29 2.1E-33 219.7 32.4 359 57-443 24-405 (422)
84 TIGR00924 yjdL_sub1_fam amino 100.0 1.6E-28 3.4E-33 237.6 36.7 388 58-449 22-470 (475)
85 PRK08633 2-acyl-glycerophospho 100.0 5.8E-29 1.3E-33 268.2 35.7 360 61-438 25-401 (1146)
86 TIGR02718 sider_RhtX_FptX side 100.0 5.6E-28 1.2E-32 229.8 35.5 361 57-442 12-386 (390)
87 PRK10207 dipeptide/tripeptide 100.0 7.4E-28 1.6E-32 232.9 35.7 397 43-445 14-474 (489)
88 PF06609 TRI12: Fungal trichot 100.0 3.3E-28 7.1E-33 233.2 31.5 352 58-422 56-467 (599)
89 TIGR00792 gph sugar (Glycoside 100.0 1.5E-28 3.2E-33 237.7 28.7 339 67-426 21-384 (437)
90 KOG0254 Predicted transporter 100.0 6.7E-28 1.5E-32 236.3 29.2 384 62-452 63-488 (513)
91 KOG2615 Permease of the major 100.0 4.1E-28 8.9E-33 212.7 23.0 351 78-439 65-432 (451)
92 KOG0253 Synaptic vesicle trans 100.0 8E-27 1.7E-31 203.3 28.2 394 41-452 75-524 (528)
93 PTZ00207 hypothetical protein; 100.0 2.7E-25 5.8E-30 214.8 33.4 378 61-447 42-552 (591)
94 KOG0252 Inorganic phosphate tr 100.0 1.1E-27 2.4E-32 215.1 15.7 392 43-447 40-498 (538)
95 TIGR00806 rfc RFC reduced fola 100.0 3.5E-25 7.7E-30 204.0 31.0 342 61-413 41-406 (511)
96 TIGR01301 GPH_sucrose GPH fami 99.9 1.3E-23 2.8E-28 199.2 36.1 395 42-452 3-476 (477)
97 PRK09584 tppB putative tripept 99.9 6.6E-24 1.4E-28 206.6 34.5 382 58-445 33-477 (500)
98 PF03825 Nuc_H_symport: Nucleo 99.9 2E-23 4.4E-28 195.7 34.9 367 58-450 14-398 (400)
99 KOG0255 Synaptic vesicle trans 99.9 8.6E-24 1.9E-28 208.5 32.3 332 73-421 110-467 (521)
100 KOG4686 Predicted sugar transp 99.9 2.2E-26 4.8E-31 193.5 11.6 387 43-448 41-444 (459)
101 PF00083 Sugar_tr: Sugar (and 99.9 4.1E-30 8.9E-35 249.5 -16.5 389 57-452 11-441 (451)
102 PRK09669 putative symporter Ya 99.9 9E-23 2E-27 197.2 32.7 335 67-426 31-392 (444)
103 PF11700 ATG22: Vacuole efflux 99.9 9.5E-22 2.1E-26 187.8 36.6 361 81-453 70-474 (477)
104 PF01306 LacY_symp: LacY proto 99.9 6.6E-23 1.4E-27 188.3 26.9 374 58-451 19-404 (412)
105 TIGR00788 fbt folate/biopterin 99.9 2.2E-23 4.7E-28 201.3 25.0 379 44-439 26-435 (468)
106 TIGR01272 gluP glucose/galacto 99.9 1.9E-22 4.2E-27 184.0 27.2 277 135-436 9-304 (310)
107 PRK15462 dipeptide/tripeptide 99.9 8.9E-21 1.9E-25 180.7 36.4 379 58-439 21-469 (493)
108 PF13347 MFS_2: MFS/sugar tran 99.9 3.9E-22 8.4E-27 191.8 27.3 339 67-426 23-388 (428)
109 KOG2563 Permease of the major 99.9 3.8E-22 8.2E-27 179.9 24.3 393 40-448 39-451 (480)
110 PRK09848 glucuronide transport 99.9 3.5E-21 7.5E-26 186.4 30.3 335 68-425 31-391 (448)
111 PRK10429 melibiose:sodium symp 99.9 8.8E-21 1.9E-25 184.4 29.4 339 68-425 29-396 (473)
112 PRK11462 putative transporter; 99.9 5.8E-19 1.3E-23 170.5 35.8 332 68-425 32-390 (460)
113 PF03209 PUCC: PUCC protein; 99.9 1.5E-18 3.2E-23 156.8 31.0 360 72-448 6-399 (403)
114 COG2270 Permeases of the major 99.9 4.7E-19 1E-23 159.4 26.9 355 80-450 57-432 (438)
115 COG2211 MelB Na+/melibiose sym 99.8 2.5E-18 5.3E-23 159.8 29.7 340 69-426 36-400 (467)
116 KOG2325 Predicted transporter/ 99.8 2.5E-19 5.4E-24 166.7 22.2 394 40-448 30-476 (488)
117 KOG3626 Organic anion transpor 99.8 6.3E-19 1.4E-23 170.5 24.2 273 57-329 108-459 (735)
118 PF03137 OATP: Organic Anion T 99.8 2.5E-22 5.4E-27 194.5 -0.3 365 58-422 15-514 (539)
119 COG3104 PTR2 Dipeptide/tripept 99.8 4.5E-17 9.8E-22 150.0 27.6 403 42-448 20-488 (498)
120 KOG2816 Predicted transporter 99.8 3E-16 6.5E-21 148.5 24.7 359 44-422 22-392 (463)
121 PF05631 DUF791: Protein of un 99.7 1E-14 2.2E-19 130.0 24.3 261 41-325 35-304 (354)
122 TIGR00889 2A0110 nucleoside tr 99.7 5.6E-16 1.2E-20 148.2 16.0 161 68-228 230-407 (418)
123 TIGR00880 2_A_01_02 Multidrug 99.7 1.7E-16 3.8E-21 127.6 10.2 137 87-225 4-140 (141)
124 PF03092 BT1: BT1 family; Int 99.7 2.7E-15 5.9E-20 143.1 19.0 374 66-448 10-414 (433)
125 TIGR00890 2A0111 Oxalate/Forma 99.6 3E-15 6.5E-20 141.8 14.3 149 67-215 226-374 (377)
126 PRK09528 lacY galactoside perm 99.6 3.7E-15 8E-20 143.3 14.8 151 75-227 256-407 (420)
127 PRK15011 sugar efflux transpor 99.6 1.5E-14 3.2E-19 137.7 17.1 152 67-221 237-389 (393)
128 PRK09874 drug efflux system pr 99.6 1.2E-14 2.7E-19 139.2 16.7 141 83-225 260-400 (408)
129 PRK05122 major facilitator sup 99.6 1.4E-14 3E-19 138.5 16.9 155 69-227 239-393 (399)
130 PRK10489 enterobactin exporter 99.6 3E-14 6.5E-19 136.9 18.3 161 66-228 243-404 (417)
131 PRK11551 putative 3-hydroxyphe 99.6 4.5E-14 9.8E-19 135.2 17.0 154 67-222 241-395 (406)
132 TIGR00902 2A0127 phenyl propri 99.6 5.2E-14 1.1E-18 133.4 16.9 151 64-218 223-374 (382)
133 PRK10642 proline/glycine betai 99.6 1.2E-13 2.5E-18 135.3 19.5 163 65-230 269-436 (490)
134 cd06174 MFS The Major Facilita 99.6 8.7E-14 1.9E-18 130.4 16.8 160 59-220 188-349 (352)
135 PRK03545 putative arabinose tr 99.6 1.6E-13 3.5E-18 130.6 18.5 152 69-224 229-381 (390)
136 PRK12382 putative transporter; 99.6 7.4E-14 1.6E-18 133.1 16.1 152 68-223 238-389 (392)
137 TIGR00899 2A0120 sugar efflux 99.6 1.4E-13 2.9E-18 130.5 16.5 147 72-221 226-372 (375)
138 TIGR01299 synapt_SV2 synaptic 99.5 1.2E-13 2.6E-18 138.5 16.5 140 84-227 598-737 (742)
139 PRK03893 putative sialic acid 99.5 2.3E-13 5.1E-18 133.9 17.3 149 66-214 295-444 (496)
140 PRK10054 putative transporter; 99.5 6.3E-13 1.4E-17 126.4 19.4 174 262-445 6-180 (395)
141 PRK03633 putative MFS family t 99.5 2.8E-13 6.1E-18 128.5 17.0 149 68-221 222-370 (381)
142 PRK09705 cynX putative cyanate 99.5 6.4E-13 1.4E-17 126.4 18.6 163 64-229 223-387 (393)
143 PRK09556 uhpT sugar phosphate 99.5 2.9E-13 6.2E-18 131.9 15.9 154 65-220 277-446 (467)
144 PRK03699 putative transporter; 99.5 2.7E-13 5.8E-18 129.2 15.3 155 64-221 223-378 (394)
145 TIGR00892 2A0113 monocarboxyla 99.5 1.3E-13 2.7E-18 133.6 13.2 152 64-217 259-415 (455)
146 TIGR00879 SP MFS transporter, 99.5 4.4E-13 9.6E-18 131.2 16.9 168 60-227 298-474 (481)
147 PRK11010 ampG muropeptide tran 99.5 7.8E-12 1.7E-16 122.1 24.7 152 69-222 246-402 (491)
148 COG2814 AraJ Arabinose efflux 99.5 2.3E-12 4.9E-17 117.9 17.9 176 45-225 213-388 (394)
149 TIGR00883 2A0106 metabolite-pr 99.5 1.9E-13 4E-18 130.3 11.1 153 61-213 234-391 (394)
150 TIGR00897 2A0118 polyol permea 99.5 1.9E-12 4.1E-17 123.7 18.0 155 63-221 239-399 (402)
151 PRK15462 dipeptide/tripeptide 99.5 3.2E-12 6.9E-17 122.4 19.0 176 262-445 8-187 (493)
152 PRK11128 putative 3-phenylprop 99.5 2E-12 4.4E-17 122.6 16.7 146 68-217 227-373 (382)
153 PRK11646 multidrug resistance 99.5 5.7E-12 1.2E-16 120.1 19.5 171 266-446 13-184 (400)
154 PRK09584 tppB putative tripept 99.5 7.9E-12 1.7E-16 122.2 20.7 177 259-443 16-197 (500)
155 TIGR00893 2A0114 d-galactonate 99.5 1.5E-12 3.3E-17 124.1 15.3 160 58-220 227-396 (399)
156 PRK11663 regulatory protein Uh 99.5 5E-12 1.1E-16 122.0 19.0 170 264-443 24-194 (434)
157 TIGR00891 2A0112 putative sial 99.5 1.9E-12 4.1E-17 123.9 15.9 139 68-208 260-401 (405)
158 PF01770 Folate_carrier: Reduc 99.5 5.7E-10 1.2E-14 102.8 31.0 333 66-409 24-389 (412)
159 PF05977 MFS_3: Transmembrane 99.4 4.9E-12 1.1E-16 122.7 18.5 154 65-220 237-391 (524)
160 TIGR00924 yjdL_sub1_fam amino 99.4 6.4E-12 1.4E-16 122.1 18.8 175 263-447 10-192 (475)
161 PRK10077 xylE D-xylose transpo 99.4 3.8E-12 8.3E-17 124.7 17.1 163 65-227 290-461 (479)
162 TIGR00900 2A0121 H+ Antiporter 99.4 2.7E-12 5.9E-17 121.0 15.3 133 67-200 232-365 (365)
163 KOG0637 Sucrose transporter an 99.4 1E-11 2.2E-16 113.1 17.7 387 43-441 32-491 (498)
164 PRK12307 putative sialic acid 99.4 4.4E-12 9.6E-17 122.3 16.5 142 66-207 251-392 (426)
165 PRK11273 glpT sn-glycerol-3-ph 99.4 3.6E-12 7.8E-17 123.6 15.8 159 64-222 271-434 (452)
166 COG2271 UhpC Sugar phosphate p 99.4 3E-12 6.5E-17 115.7 13.2 179 263-451 29-210 (448)
167 PF07690 MFS_1: Major Facilita 99.4 9.9E-12 2.1E-16 116.5 17.5 167 269-443 2-168 (352)
168 TIGR00903 2A0129 major facilit 99.4 1.5E-11 3.2E-16 115.4 18.1 163 276-449 4-167 (368)
169 PRK10504 putative transporter; 99.4 1.7E-11 3.7E-16 119.9 19.1 176 263-447 10-185 (471)
170 PRK09952 shikimate transporter 99.4 9E-12 2E-16 120.2 16.8 153 71-225 276-434 (438)
171 PRK10207 dipeptide/tripeptide 99.4 2.3E-11 5.1E-16 118.2 19.6 177 262-445 13-192 (489)
172 PF11700 ATG22: Vacuole efflux 99.4 1.7E-11 3.7E-16 117.7 17.9 158 63-222 299-467 (477)
173 TIGR00710 efflux_Bcr_CflA drug 99.4 2.1E-11 4.5E-16 115.9 18.4 169 270-448 12-181 (385)
174 PRK10091 MFS transport protein 99.4 3.3E-11 7.1E-16 114.4 19.2 174 262-445 2-176 (382)
175 PRK10213 nepI ribonucleoside t 99.4 6.2E-11 1.3E-15 112.7 21.0 157 278-444 35-192 (394)
176 PLN00028 nitrate transmembrane 99.4 5.2E-11 1.1E-15 116.1 20.8 177 260-447 30-219 (476)
177 PF01306 LacY_symp: LacY proto 99.4 2.2E-11 4.7E-16 112.8 16.9 170 57-229 236-406 (412)
178 TIGR00886 2A0108 nitrite extru 99.4 4.1E-11 8.8E-16 113.1 19.3 168 264-441 2-182 (366)
179 PRK15075 citrate-proton sympor 99.4 9.5E-12 2.1E-16 120.1 14.6 138 64-203 256-399 (434)
180 PRK15402 multidrug efflux syst 99.4 4.7E-11 1E-15 114.4 19.2 156 69-225 238-397 (406)
181 TIGR00882 2A0105 oligosacchari 99.4 1.8E-11 3.8E-16 116.9 16.0 143 77-221 250-393 (396)
182 TIGR02718 sider_RhtX_FptX side 99.4 1.7E-11 3.6E-16 116.8 15.7 148 68-217 230-385 (390)
183 PRK11902 ampG muropeptide tran 99.4 3.9E-11 8.5E-16 114.7 18.0 147 70-221 234-388 (402)
184 TIGR02332 HpaX 4-hydroxyphenyl 99.4 5.7E-11 1.2E-15 113.7 19.1 170 267-447 12-189 (412)
185 PRK14995 methyl viologen resis 99.4 9.7E-11 2.1E-15 114.9 20.7 174 265-448 8-183 (495)
186 TIGR00792 gph sugar (Glycoside 99.3 1.6E-11 3.4E-16 118.9 14.9 123 79-202 255-384 (437)
187 PRK11043 putative transporter; 99.3 1E-10 2.2E-15 111.8 20.2 172 268-448 8-182 (401)
188 PRK10473 multidrug efflux syst 99.3 1E-10 2.2E-15 111.5 20.1 175 264-448 4-179 (392)
189 TIGR00711 efflux_EmrB drug res 99.3 5.2E-11 1.1E-15 117.0 18.3 171 267-447 6-177 (485)
190 TIGR00895 2A0115 benzoate tran 99.3 2.6E-11 5.7E-16 115.7 15.2 131 63-195 267-397 (398)
191 PF03825 Nuc_H_symport: Nucleo 99.3 6.7E-11 1.4E-15 111.5 16.7 167 58-226 219-398 (400)
192 PRK15034 nitrate/nitrite trans 99.3 1.5E-10 3.3E-15 109.8 17.4 178 263-448 34-233 (462)
193 TIGR00712 glpT glycerol-3-phos 99.3 9.6E-11 2.1E-15 113.3 16.4 175 263-446 27-205 (438)
194 PRK11195 lysophospholipid tran 99.3 1.6E-10 3.6E-15 109.8 17.4 170 262-444 2-171 (393)
195 PRK11652 emrD multidrug resist 99.3 3.2E-10 6.9E-15 108.2 19.4 168 268-446 13-182 (394)
196 TIGR01272 gluP glucose/galacto 99.3 1.4E-10 3.1E-15 106.0 16.2 130 75-209 172-301 (310)
197 PF06963 FPN1: Ferroportin1 (F 99.3 3E-09 6.5E-14 99.9 25.1 353 57-414 13-410 (432)
198 PRK11102 bicyclomycin/multidru 99.3 1.6E-10 3.5E-15 109.5 17.1 159 278-446 6-165 (377)
199 TIGR00769 AAA ADP/ATP carrier 99.3 9.9E-08 2.1E-12 90.9 35.4 256 69-329 26-333 (472)
200 TIGR00887 2A0109 phosphate:H+ 99.3 9.6E-11 2.1E-15 115.3 15.6 162 66-228 308-493 (502)
201 PF06813 Nodulin-like: Nodulin 99.3 1.9E-10 4.1E-15 99.7 15.1 167 58-227 14-185 (250)
202 TIGR00881 2A0104 phosphoglycer 99.3 4.4E-11 9.5E-16 113.3 12.2 141 65-205 235-379 (379)
203 TIGR00896 CynX cyanate transpo 99.3 9.8E-11 2.1E-15 110.0 14.3 135 65-202 216-353 (355)
204 PRK10406 alpha-ketoglutarate t 99.3 2.5E-10 5.4E-15 110.2 17.3 155 66-221 263-422 (432)
205 KOG2504 Monocarboxylate transp 99.3 6.9E-11 1.5E-15 114.3 13.3 174 46-223 300-476 (509)
206 COG2270 Permeases of the major 99.3 6.4E-11 1.4E-15 107.4 11.9 166 47-215 255-421 (438)
207 COG2223 NarK Nitrate/nitrite t 99.2 1.3E-10 2.8E-15 105.5 12.5 159 64-223 236-401 (417)
208 PRK15403 multidrug efflux syst 99.2 1.1E-09 2.3E-14 105.0 19.6 154 281-445 34-189 (413)
209 KOG0569 Permease of the major 99.2 2.9E-10 6.2E-15 107.5 14.5 188 40-230 266-461 (485)
210 TIGR00898 2A0119 cation transp 99.2 4.8E-10 1E-14 110.7 15.7 149 73-227 350-498 (505)
211 TIGR00885 fucP L-fucose:H+ sym 99.2 3.1E-09 6.6E-14 101.5 20.5 171 265-443 5-203 (410)
212 TIGR00926 2A1704 Peptide:H+ sy 99.2 2.5E-08 5.4E-13 99.3 27.0 156 67-222 9-181 (654)
213 PRK08633 2-acyl-glycerophospho 99.2 5.2E-10 1.1E-14 121.6 15.9 143 70-214 257-401 (1146)
214 PRK09848 glucuronide transport 99.2 5.7E-10 1.2E-14 108.3 14.5 134 68-201 250-391 (448)
215 KOG3762 Predicted transporter 99.1 1.9E-09 4.2E-14 100.4 16.2 180 258-447 366-547 (618)
216 KOG3574 Acetyl-CoA transporter 99.1 1.4E-08 3.1E-13 90.4 20.6 364 40-424 28-433 (510)
217 PF02487 CLN3: CLN3 protein; 99.1 5.1E-08 1.1E-12 90.0 25.1 320 83-418 61-393 (402)
218 PRK06814 acylglycerophosphoeth 99.1 9.4E-10 2E-14 119.2 15.9 146 68-215 247-414 (1140)
219 PRK10133 L-fucose transporter; 99.1 8.3E-09 1.8E-13 99.4 20.4 148 264-420 27-177 (438)
220 KOG3098 Uncharacterized conser 99.1 5.2E-08 1.1E-12 91.5 24.5 315 87-418 56-410 (461)
221 TIGR00880 2_A_01_02 Multidrug 99.1 1.9E-09 4.2E-14 86.2 12.5 136 305-448 4-139 (141)
222 PRK10429 melibiose:sodium symp 99.1 2.6E-09 5.7E-14 104.2 15.3 138 64-201 249-396 (473)
223 TIGR00806 rfc RFC reduced fola 99.1 1.1E-08 2.4E-13 95.7 18.2 158 283-451 45-207 (511)
224 PRK09669 putative symporter Ya 99.1 2.1E-09 4.5E-14 104.2 13.5 124 79-202 262-392 (444)
225 COG0477 ProP Permeases of the 99.0 9.9E-09 2.1E-13 94.1 16.2 158 58-215 14-177 (338)
226 KOG4332 Predicted sugar transp 99.0 1.1E-08 2.5E-13 86.7 14.7 355 63-442 54-426 (454)
227 PF13347 MFS_2: MFS/sugar tran 99.0 6.5E-09 1.4E-13 100.2 14.8 144 58-202 237-388 (428)
228 TIGR00894 2A0114euk Na(+)-depe 99.0 3.3E-09 7.1E-14 103.6 12.9 159 60-221 275-448 (465)
229 TIGR00901 2A0125 AmpG-related 99.0 1.8E-08 3.9E-13 94.7 17.3 157 281-448 6-179 (356)
230 KOG4686 Predicted sugar transp 99.0 6E-09 1.3E-13 89.2 11.6 146 71-220 290-440 (459)
231 TIGR00788 fbt folate/biopterin 99.0 1.2E-08 2.5E-13 99.1 15.1 150 73-225 280-447 (468)
232 PF06609 TRI12: Fungal trichot 99.0 4.8E-08 1E-12 95.1 19.0 176 259-446 36-216 (599)
233 KOG1330 Sugar transporter/spin 99.0 9.4E-10 2E-14 100.9 6.8 175 267-451 37-213 (493)
234 KOG3764 Vesicular amine transp 99.0 3.9E-09 8.5E-14 94.8 10.4 146 294-448 101-248 (464)
235 TIGR01301 GPH_sucrose GPH fami 99.0 2.6E-08 5.7E-13 95.3 16.7 177 265-450 6-221 (477)
236 COG3104 PTR2 Dipeptide/tripept 98.9 2E-08 4.3E-13 93.6 14.3 181 259-449 16-208 (498)
237 KOG3762 Predicted transporter 98.9 3.1E-09 6.8E-14 99.0 8.6 148 71-220 396-544 (618)
238 PTZ00207 hypothetical protein; 98.9 1.3E-07 2.8E-12 92.7 19.1 156 280-446 44-204 (591)
239 COG2807 CynX Cyanate permease 98.9 5.8E-08 1.3E-12 86.6 14.9 162 60-224 222-386 (395)
240 TIGR00805 oat sodium-independe 98.9 5.8E-08 1.3E-12 97.5 16.0 158 288-447 57-281 (633)
241 KOG0253 Synaptic vesicle trans 98.9 1.3E-08 2.8E-13 90.5 9.6 131 90-226 390-522 (528)
242 KOG2615 Permease of the major 98.8 2E-08 4.3E-13 89.8 9.9 117 296-421 65-181 (451)
243 COG2211 MelB Na+/melibiose sym 98.8 1.2E-07 2.6E-12 89.1 15.5 139 63-201 253-399 (467)
244 PRK11462 putative transporter; 98.8 1E-07 2.2E-12 92.5 15.5 132 70-201 252-390 (460)
245 PF03219 TLC: TLC ATP/ADP tran 98.8 1.6E-05 3.4E-10 76.4 29.5 247 79-330 56-350 (491)
246 COG0738 FucP Fucose permease [ 98.8 8.9E-07 1.9E-11 80.4 18.1 169 272-447 21-210 (422)
247 PF06779 DUF1228: Protein of u 98.7 4.3E-08 9.3E-13 68.6 6.7 80 58-139 4-83 (85)
248 PF03209 PUCC: PUCC protein; 98.7 2.6E-06 5.5E-11 78.1 19.6 150 70-221 233-396 (403)
249 KOG3810 Micronutrient transpor 98.7 8.3E-07 1.8E-11 78.5 15.2 362 74-450 34-424 (433)
250 KOG2532 Permease of the major 98.7 3E-07 6.4E-12 88.1 13.8 150 293-449 67-218 (466)
251 PF00083 Sugar_tr: Sugar (and 98.5 6.4E-10 1.4E-14 108.1 -9.5 164 64-229 271-442 (451)
252 PF05978 UNC-93: Ion channel r 98.5 4.3E-06 9.4E-11 67.0 13.2 108 86-196 42-149 (156)
253 KOG0254 Predicted transporter 98.5 4.4E-06 9.6E-11 82.5 16.2 185 42-229 293-489 (513)
254 KOG0252 Inorganic phosphate tr 98.5 2.7E-07 5.8E-12 84.8 5.9 169 58-229 316-503 (538)
255 COG3202 ATP/ADP translocase [E 98.4 0.0016 3.4E-08 61.3 32.1 256 71-329 48-352 (509)
256 PF06813 Nodulin-like: Nodulin 98.4 7.6E-06 1.7E-10 71.2 13.5 144 280-435 19-169 (250)
257 KOG1237 H+/oligopeptide sympor 98.4 0.00034 7.3E-09 68.9 26.0 156 65-220 57-242 (571)
258 KOG2533 Permease of the major 98.4 5E-06 1.1E-10 80.1 13.1 148 292-448 74-228 (495)
259 KOG2816 Predicted transporter 98.3 2.6E-05 5.7E-10 74.6 16.5 149 44-197 241-391 (463)
260 KOG0255 Synaptic vesicle trans 98.3 7.4E-06 1.6E-10 81.3 13.2 141 294-446 113-254 (521)
261 PF05631 DUF791: Protein of un 98.3 0.00017 3.8E-09 65.3 19.7 148 293-450 63-219 (354)
262 PF13000 Acatn: Acetyl-coenzym 98.3 0.00029 6.2E-09 66.3 21.1 263 57-322 11-336 (544)
263 PF00854 PTR2: POT family; In 98.2 1.4E-05 3.1E-10 75.4 11.9 110 112-221 2-121 (372)
264 PF12832 MFS_1_like: MFS_1 lik 98.2 1.9E-05 4.1E-10 55.0 8.8 64 266-330 3-66 (77)
265 PF12832 MFS_1_like: MFS_1 lik 98.2 8.6E-06 1.9E-10 56.8 7.0 64 58-121 12-75 (77)
266 KOG1479 Nucleoside transporter 98.1 0.00043 9.2E-09 63.9 17.3 111 58-171 30-151 (406)
267 PF07672 MFS_Mycoplasma: Mycop 98.0 0.00018 4E-09 61.8 13.5 240 168-421 2-267 (267)
268 TIGR00926 2A1704 Peptide:H+ sy 98.0 0.00038 8.1E-09 70.0 16.5 162 278-447 2-182 (654)
269 TIGR00939 2a57 Equilibrative N 97.9 0.0033 7.1E-08 60.3 21.0 98 89-191 53-156 (437)
270 KOG2325 Predicted transporter/ 97.9 0.00035 7.6E-09 66.4 13.8 179 265-449 36-231 (488)
271 PF03092 BT1: BT1 family; Int 97.7 0.00089 1.9E-08 64.4 13.8 156 286-448 12-176 (433)
272 KOG3880 Predicted small molecu 97.6 0.00074 1.6E-08 59.2 10.5 138 83-227 64-203 (409)
273 KOG2563 Permease of the major 97.5 0.0019 4.2E-08 60.1 12.9 153 263-423 41-203 (480)
274 PF05978 UNC-93: Ion channel r 97.4 0.012 2.6E-07 47.4 14.8 111 302-421 40-150 (156)
275 PF02487 CLN3: CLN3 protein; 97.3 0.0041 8.9E-08 58.0 12.6 118 76-197 276-396 (402)
276 PRK03612 spermidine synthase; 97.3 0.025 5.5E-07 55.6 18.2 168 268-441 19-191 (521)
277 PRK03612 spermidine synthase; 97.2 0.0095 2.1E-07 58.5 14.6 143 72-217 41-191 (521)
278 PF06963 FPN1: Ferroportin1 (F 97.2 0.076 1.7E-06 50.6 19.8 178 264-443 3-196 (432)
279 PF01770 Folate_carrier: Reduc 97.1 0.027 5.9E-07 52.8 15.5 161 281-451 21-186 (412)
280 KOG3097 Predicted membrane pro 96.8 0.34 7.4E-06 43.6 19.1 100 92-194 69-183 (390)
281 COG0477 ProP Permeases of the 96.7 0.16 3.4E-06 45.9 17.0 151 277-436 16-174 (338)
282 KOG3098 Uncharacterized conser 96.6 0.071 1.5E-06 50.9 14.4 137 58-195 252-411 (461)
283 PF06779 DUF1228: Protein of u 96.6 0.021 4.6E-07 40.2 7.8 53 276-329 5-57 (85)
284 TIGR00769 AAA ADP/ATP carrier 96.5 0.22 4.7E-06 48.2 17.0 151 264-421 8-190 (472)
285 KOG4830 Predicted sugar transp 96.1 0.00089 1.9E-08 57.2 -1.2 65 253-317 191-255 (412)
286 PF01733 Nucleoside_tran: Nucl 95.0 0.0066 1.4E-07 55.6 -0.1 113 303-416 186-304 (309)
287 TIGR00939 2a57 Equilibrative N 94.9 0.58 1.3E-05 45.0 12.8 111 82-195 308-431 (437)
288 KOG3626 Organic anion transpor 94.7 0.7 1.5E-05 46.8 13.2 168 281-450 114-346 (735)
289 KOG0637 Sucrose transporter an 94.4 0.1 2.2E-06 49.1 6.1 152 264-417 33-200 (498)
290 KOG1479 Nucleoside transporter 94.3 2.8 6.1E-05 39.4 15.3 179 262-445 17-202 (406)
291 PF00854 PTR2: POT family; In 94.3 0.3 6.4E-06 46.2 9.3 86 362-447 35-123 (372)
292 PF03137 OATP: Organic Anion T 93.7 0.015 3.1E-07 57.5 -0.7 176 270-448 10-251 (539)
293 KOG3574 Acetyl-CoA transporter 93.3 1.3 2.8E-05 41.0 10.8 183 262-451 30-240 (510)
294 KOG2601 Iron transporter [Inor 92.9 2.8 6E-05 38.8 12.3 177 262-440 26-219 (503)
295 KOG3810 Micronutrient transpor 92.3 2.4 5.2E-05 38.8 10.9 134 84-222 274-420 (433)
296 KOG1237 H+/oligopeptide sympor 92.2 6.1 0.00013 39.5 15.0 176 268-446 42-244 (571)
297 KOG2601 Iron transporter [Inor 91.2 4.1 9E-05 37.7 11.3 158 57-214 38-217 (503)
298 PF07857 DUF1632: CEO family ( 90.2 4.5 9.7E-05 35.5 10.4 49 269-317 184-236 (254)
299 KOG3880 Predicted small molecu 89.6 0.77 1.7E-05 41.0 5.3 116 74-196 280-402 (409)
300 KOG4332 Predicted sugar transp 86.2 11 0.00023 33.4 10.0 136 83-218 284-426 (454)
301 PF13000 Acatn: Acetyl-coenzym 84.8 7.4 0.00016 37.7 9.2 67 266-332 3-73 (544)
302 PF01733 Nucleoside_tran: Nucl 83.6 0.38 8.3E-06 44.0 0.3 107 86-194 187-306 (309)
303 PF02990 EMP70: Endomembrane p 82.8 45 0.00097 33.2 14.3 74 257-331 252-329 (521)
304 COG4262 Predicted spermidine s 74.4 74 0.0016 29.5 14.0 97 67-163 28-132 (508)
305 PF06912 DUF1275: Protein of u 70.9 65 0.0014 27.4 12.6 39 163-201 153-191 (209)
306 PF11947 DUF3464: Protein of u 69.3 17 0.00036 29.0 5.7 30 382-411 116-145 (153)
307 COG5336 Uncharacterized protei 68.2 26 0.00056 25.8 5.9 39 392-430 38-77 (116)
308 PF07672 MFS_Mycoplasma: Mycop 65.1 1E+02 0.0022 27.4 10.6 100 84-187 144-254 (267)
309 KOG3097 Predicted membrane pro 62.5 1.1E+02 0.0025 28.2 10.1 99 263-377 29-127 (390)
310 PF05255 UPF0220: Uncharacteri 58.5 1E+02 0.0022 25.2 8.5 57 164-220 14-76 (166)
311 COG1457 CodB Purine-cytosine p 57.6 1.9E+02 0.0041 28.0 23.0 147 162-329 11-158 (442)
312 COG4262 Predicted spermidine s 53.5 1.9E+02 0.0042 27.0 14.2 34 291-324 35-68 (508)
313 PRK00293 dipZ thiol:disulfide 53.5 2.6E+02 0.0056 28.3 20.3 32 297-328 323-354 (571)
314 PF02694 UPF0060: Uncharacteri 50.6 41 0.00088 24.9 4.5 52 81-132 54-105 (107)
315 PRK10263 DNA translocase FtsK; 49.6 2.6E+02 0.0057 31.2 11.9 33 407-439 142-174 (1355)
316 PRK13629 threonine/serine tran 48.8 2.6E+02 0.0057 27.1 16.8 43 167-214 19-61 (443)
317 PF11368 DUF3169: Protein of u 48.7 1.9E+02 0.0041 25.4 10.7 25 171-195 9-33 (248)
318 COG1288 Predicted membrane pro 44.9 2.9E+02 0.0064 26.6 10.9 25 195-219 212-236 (481)
319 PRK02237 hypothetical protein; 44.4 67 0.0015 23.8 4.8 52 81-132 56-107 (109)
320 COG2962 RarD Predicted permeas 44.1 2.4E+02 0.0052 25.4 10.6 31 257-287 63-93 (293)
321 PF03741 TerC: Integral membra 44.1 1.9E+02 0.0041 24.1 15.5 55 153-209 13-67 (183)
322 PF11947 DUF3464: Protein of u 44.1 62 0.0013 25.9 5.0 50 135-187 96-145 (153)
323 PF07760 DUF1616: Protein of u 42.6 2.5E+02 0.0054 25.4 9.5 56 139-195 22-77 (287)
324 PF03596 Cad: Cadmium resistan 42.4 2.1E+02 0.0045 24.1 8.4 10 282-291 113-122 (191)
325 PF02694 UPF0060: Uncharacteri 39.8 68 0.0015 23.7 4.3 34 298-331 53-86 (107)
326 PF03219 TLC: TLC ATP/ADP tran 38.2 4.1E+02 0.0089 26.3 24.6 49 392-440 315-363 (491)
327 PF04226 Transgly_assoc: Trans 38.0 98 0.0021 19.1 4.9 38 184-221 7-44 (48)
328 PF11299 DUF3100: Protein of u 37.7 53 0.0012 28.2 4.0 54 141-195 176-229 (241)
329 PF03706 UPF0104: Uncharacteri 37.6 3E+02 0.0065 24.6 12.5 50 77-126 23-72 (294)
330 PRK10263 DNA translocase FtsK; 37.1 1.7E+02 0.0037 32.6 8.4 17 184-200 143-159 (1355)
331 PRK10599 calcium/sodium:proton 36.3 1.7E+02 0.0038 27.4 7.5 60 62-124 238-300 (366)
332 PRK02237 hypothetical protein; 35.3 1.2E+02 0.0027 22.5 5.0 33 299-331 56-88 (109)
333 PF12273 RCR: Chitin synthesis 34.1 21 0.00046 27.7 1.1 18 202-219 1-18 (130)
334 COG4769 Predicted membrane pro 33.3 39 0.00085 27.2 2.4 53 89-149 81-133 (181)
335 COG3559 TnrB3 Putative exporte 33.1 4.5E+02 0.0098 25.3 14.0 65 261-325 296-370 (536)
336 PF13386 DsbD_2: Cytochrome C 31.6 3.1E+02 0.0068 23.0 15.8 35 295-329 146-180 (199)
337 COG1268 BioY Uncharacterized c 31.3 1.1E+02 0.0024 25.5 4.8 24 87-110 88-111 (184)
338 COG3619 Predicted membrane pro 30.2 3.7E+02 0.0079 23.3 17.1 122 79-200 53-196 (226)
339 PF10183 ESSS: ESSS subunit of 29.1 67 0.0015 23.8 3.0 31 197-227 55-85 (105)
340 PF01925 TauE: Sulfite exporte 28.0 3.9E+02 0.0085 23.0 12.4 19 182-200 70-88 (240)
341 PF11151 DUF2929: Protein of u 27.9 1.7E+02 0.0037 18.9 5.3 40 182-221 12-51 (57)
342 PF02632 BioY: BioY family; I 27.7 1.2E+02 0.0026 24.2 4.4 42 87-128 59-100 (148)
343 COG2233 UraA Xanthine/uracil p 27.7 3.4E+02 0.0074 26.4 8.0 126 36-167 8-136 (451)
344 TIGR01478 STEVOR variant surfa 27.1 96 0.0021 27.6 3.9 29 423-451 259-287 (295)
345 PTZ00370 STEVOR; Provisional 27.1 94 0.002 27.7 3.9 29 423-451 255-283 (296)
346 TIGR02230 ATPase_gene1 F0F1-AT 26.3 2.7E+02 0.0058 20.5 6.4 28 174-201 45-72 (100)
347 PLN02332 membrane bound O-acyl 25.3 5.1E+02 0.011 25.4 9.0 30 109-140 339-368 (465)
348 KOG4830 Predicted sugar transp 25.3 2E+02 0.0044 25.6 5.5 96 72-168 228-325 (412)
349 COG1230 CzcD Co/Zn/Cd efflux s 24.6 5.4E+02 0.012 23.4 14.5 67 57-129 36-105 (296)
350 PF11511 RhodobacterPufX: Intr 24.2 2.2E+02 0.0049 19.0 4.3 30 201-230 30-59 (67)
351 PF03596 Cad: Cadmium resistan 23.8 1.6E+02 0.0035 24.7 4.6 48 63-113 111-167 (191)
352 PF11833 DUF3353: Protein of u 23.5 4.5E+02 0.0098 22.1 9.0 31 167-197 136-166 (194)
353 TIGR03173 pbuX xanthine permea 22.7 6.8E+02 0.015 23.9 10.1 99 72-172 19-117 (406)
354 PF11299 DUF3100: Protein of u 22.5 1.4E+02 0.0031 25.8 4.0 49 365-414 176-224 (241)
355 PRK13108 prolipoprotein diacyl 22.2 7.5E+02 0.016 24.3 9.3 24 292-315 46-69 (460)
356 COG0730 Predicted permeases [G 21.9 5.5E+02 0.012 22.5 12.9 23 307-329 211-233 (258)
357 PF06783 UPF0239: Uncharacteri 21.0 1.8E+02 0.0039 20.5 3.6 22 202-223 23-44 (85)
358 PF13491 DUF4117: Domain of un 20.8 4.6E+02 0.0099 21.2 9.0 37 405-441 120-156 (171)
359 KOG1278 Endosomal membrane pro 20.7 3E+02 0.0066 27.3 6.2 31 296-326 356-386 (628)
360 COG0387 ChaA Ca2+/H+ antiporte 20.2 4.7E+02 0.01 24.6 7.1 63 59-122 234-298 (368)
No 1
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=100.00 E-value=7.6e-44 Score=322.12 Aligned_cols=381 Identities=20% Similarity=0.282 Sum_probs=310.5
Q ss_pred chHHHHHHHHHHHHHHHHhhhchhhhhcchhhhhhcCCChhhHHHHHHHHHHHHHHhhhhhhhhhccccchHHHHHHHHH
Q 012902 41 SYKQIISLCVGNFEQIFIVFGQVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVW 120 (454)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~ 120 (454)
.+..++.+....| ..+........++|++.+|+|+|..+.|++.|.|.++..+++|+...++||+.||++++..+.+
T Consensus 11 ~~~~l~aLa~~~F---~igttEfv~~gLLp~iA~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl~~l~l 87 (394)
T COG2814 11 MWLALLALALAAF---AIGTTEFVPVGLLPPIAADLGVSEGAAGQLITAYALGVALGAPLLALLTGRLERRRLLLGLLAL 87 (394)
T ss_pred chHHHHHHHHHHH---HHHhHHHHHHhchHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHH
Confidence 3344444444444 4778888899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhhhcccccHHHHHHHHHHHHhhcccchhhhhHHHhhhcCccchHHHHHHHHhhHHHHHHhHHhHHHHHhhccC
Q 012902 121 WSIATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFG 200 (454)
Q Consensus 121 ~~~~~~l~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~ig~~l~~~l~~~~g 200 (454)
+.++.+++++++ ||+.++++|++.|+..|.+++...++..|..|+++|++++++...+.+++.++|.+++.++.+.+|
T Consensus 88 Fi~~n~l~alAp--~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~~~G 165 (394)
T COG2814 88 FIVSNLLSALAP--SFAVLLLARALAGLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTFLGQLFG 165 (394)
T ss_pred HHHHHHHHHHhc--cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHHHHHHhh
Confidence 999999999999 999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cchhHHHHhHHHHHHHHHHHHhcCCCCCCCCCCChhhhhhhhhccccCCCCCCcchhHhhcCcchHHHHHHHHHHHHHHH
Q 012902 201 WPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTF 280 (454)
Q Consensus 201 wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (454)
||.+|++.+.++++..+..+..+| |++.++..+.+ ..+..+.+|+|+++...+..++...+.+
T Consensus 166 WR~~F~~ia~l~ll~~~~~~~~lP--~~~~~~~~~~~---------------~~~~~~~l~~p~v~~~l~~t~l~~~g~F 228 (394)
T COG2814 166 WRATFLAIAVLALLALLLLWKLLP--PSEISGSLPGP---------------LRTLLRLLRRPGVLLGLLATFLFMTGHF 228 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCC--CccCCCCCCcc---------------hhHHHHHhcCchHHHHHHHHHHHHcchh
Confidence 999999999999999998888888 22111111111 1122348999999999999999999999
Q ss_pred HHHhhHHHHHHHHhCCcccchhhHhHHHHHHHHHHHHHHHHHhhhhhhcCccchhhHHHHHHHHHHHHHHHHHHhhccCh
Q 012902 281 ILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDS 360 (454)
Q Consensus 281 ~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (454)
..++|+.+++++..|+|+...++.+..++++.++|+.++|++.|| +.|+ ...............+.. ..++
T Consensus 229 ~~ftYi~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr-~~~~-------~l~~~~~l~a~~~l~l~~-~~~~ 299 (394)
T COG2814 229 ALYTYIRPFLESVAGFSVSAVSLVLLAFGIAGFIGNLLGGRLADR-GPRR-------ALIAALLLLALALLALTF-TGAS 299 (394)
T ss_pred hhHHhHHHHHHHccCCCHhHHHHHHHHHHHHHHHHHHHHhhhccc-cchh-------HHHHHHHHHHHHHHHHHH-hcch
Confidence 999999999999999999999999999999999999999999999 6552 122222222222222222 2233
Q ss_pred hHHHHHHHHHHHhhhhhhcchhhhhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHH
Q 012902 361 PAMAVLCMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGT 440 (454)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~ 440 (454)
.+.......+..+..............+..||.+..+.+++....|+|..+|..++|.+.|+.|+....++.++..+++.
T Consensus 300 ~~~~~~~~~~wg~a~~~~~~~~~~~~a~~~p~~~~~a~sl~~aa~nlgia~GA~lGG~v~~~~g~~~~~~~~a~l~~~a~ 379 (394)
T COG2814 300 PALALALLFLWGFAFSPALQGLQTRLARLAPDAADLAGSLNVAAFNLGIALGAALGGLVLDALGYAATGWVGAALLLLAL 379 (394)
T ss_pred HHHHHHHHHHHHHHhhhhhhHHHHHhcccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHH
Confidence 33333333332222222222333333345678999999999999999999999999999999999999999999999998
Q ss_pred HHHHHhccCCcc
Q 012902 441 AVWNLFSTGEKV 452 (454)
Q Consensus 441 ~~~~~~~~~~~~ 452 (454)
++.+...+.+++
T Consensus 380 ~~~~~~~~~~~~ 391 (394)
T COG2814 380 LLALLSARKDRR 391 (394)
T ss_pred HHHHHHHhcccc
Confidence 887776654443
No 2
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1e-44 Score=322.58 Aligned_cols=402 Identities=17% Similarity=0.211 Sum_probs=326.5
Q ss_pred cccccchHHHHHHHHHHHHHHHHhhhchhhhhcchhhhhhcCCChhhHHHHHHHHHHHHHHhhhhhhhhhccccchHHHH
Q 012902 36 KLKHNSYKQIISLCVGNFEQIFIVFGQVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLG 115 (454)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~ 115 (454)
+..++.+++++...++++. ..++.+..++.+.|.+.+|.++|.+|+|++.+++.+++.++..+.|.++||.+.|+.+.
T Consensus 21 ~~y~~~r~qif~~~fiGYa--~fYl~RknF~~a~p~l~e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr~fm~ 98 (448)
T COG2271 21 KTYKRWRIQIFLSIFIGYA--AFYLTRKNFNLAMPALIEDGGLSKTQLGILGSAFSITYGVSKFVMGVLSDRSNPRYFMA 98 (448)
T ss_pred HHHHHHHHHHHHHHHHHHH--HHHHHHHhHhhccHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCceeeh
Confidence 3445677888999999999 88999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhhhcccccHHHHHHHHHHHHhhcccchhhhhHHHhhhcCccchHHHHHHHHhhHHHHHHhHHhHH--H
Q 012902 116 FGVVWWSIATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFS--P 193 (454)
Q Consensus 116 ~~~~~~~~~~~l~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~ig~~l~--~ 193 (454)
.|+++.++..+++++++ +.+.+.+.-++.|..+|..+|++...++.|+|++|||+..++++.+.++|..+.|++. +
T Consensus 99 ~gLilsai~nil~Gfs~--s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la 176 (448)
T COG2271 99 FGLILSAIVNILFGFSP--SLFLFAVLWVLNGWFQGMGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVALLA 176 (448)
T ss_pred HHHHHHHHHHHHHhhhh--HHHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCccccCceEEEehhhhhcccchHHHHHHHH
Confidence 99999999999999999 9999999999999999999999999999999999999999999999999999999999 8
Q ss_pred HHhhccCcchhHHHHhHHHHHHHHHHHHhcCCCCCCCCCCChhhhhhhhhcc-ccCCC-----CCCcchhHhhcCcchHH
Q 012902 194 FLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSC-ASKEP-----VKTIPWGLILSKPPVWA 267 (454)
Q Consensus 194 ~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-----~~~~~~~~~~~~~~~~~ 267 (454)
++..+.+||..|++.++++++..++.++..+++|++..-.+.++......+. +++++ ..+.-.+.+++||.+|.
T Consensus 177 ~~~~~~~w~~~f~~pgiiaiival~~~~~~rd~Pqs~GLP~ie~~~~d~~e~~~~~~~~~~ls~~~i~~~YVL~Nk~iW~ 256 (448)
T COG2271 177 FFAFHGGWRAAFYFPGIIAIIVALILLFLLRDRPQSEGLPPIEEYRGDPLEIYEEEKENEGLTAWQIFVKYVLKNKLIWL 256 (448)
T ss_pred HHHhccchhHHHHHHHHHHHHHHHHHHHHhCCCccccCCCCHHHhhcCchhhhhhhccCCCccHHHHHHHHHHcChHHHH
Confidence 9998899999999999999999999999999988765433333222111111 11111 11233456789999999
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHhCCcccchhhHhHHHHHHHHHHHHHHHHHhhhhhhcCccchhhHHHHHHHHHHH
Q 012902 268 LIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLG 347 (454)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~ 347 (454)
+++..++.+..-+++..|.|.|+.|+.|+|..+++...+.+-.++++|+++.|+++||+.+.+.. ....+.+++
T Consensus 257 la~a~vfvYivR~gi~dW~p~YL~e~k~~s~~~a~~a~~lfE~agl~G~Ll~GwlSDklfkgrR~------p~~~i~~~~ 330 (448)
T COG2271 257 LALANVFVYVVRYGINDWGPLYLSEVKGFSLVKANWAISLFEVAGLPGTLLAGWLSDKLFKGRRG------PMALIFMLL 330 (448)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHhcCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccccc------hHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999998633321 222222222
Q ss_pred HHHHHHHh--hccChhHH-HHHHHHHHHhhhhhhcchhhhhhccccc-ccchhHHHHHHHHHHH-HHHHHHHHHHHHhcc
Q 012902 348 PAFFLTQL--SHVDSPAM-AVLCMACSQGTDAFSQSGLYSNHQDIAP-RYSGVLLGLSNTAGVL-AGVFGTAATGYILQH 422 (454)
Q Consensus 348 ~~~~~~~~--~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~-g~~~~~~~~g~l~~~ 422 (454)
....+... ....+.+. .+.++.+++...+.. ...-....|+.| +..|++.|+...+.++ |.+.+....|++.|.
T Consensus 331 i~~~~~~~w~~~~~~~~l~~~~l~~iGf~IyGPq-mLiGl~a~e~~pK~AaGtA~Gf~Glf~Yl~Ga~~a~~~~g~i~d~ 409 (448)
T COG2271 331 ITASLVLYWLAPNGSYLLDAILLFIIGFLIYGPQ-MLIGLAAAEFVPKKAAGTATGFVGLFAYLIGAALAGLPLGYIADT 409 (448)
T ss_pred HHHHHHHHHcCCCccHHHHHHHHHHHHHHHhhHH-HHHHHHHhccccHhhccchhchhhhHHHHhhHHhcCCcceeeEec
Confidence 22222222 22222233 333344444433333 333334455555 6799999999999999 999999999999999
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHhcc
Q 012902 423 GSWDDVFKVSVGLYLVGTAVWNLFST 448 (454)
Q Consensus 423 ~g~~~~~~~~~~~~~~~~~~~~~~~~ 448 (454)
.||...|++..+..+++.++.....+
T Consensus 410 ~gW~g~Fi~~~~~a~l~~lll~~~~~ 435 (448)
T COG2271 410 WGWDGGFIVLSIAALLAILLLLPVWN 435 (448)
T ss_pred CCCcchHHHHHHHHHHHHHHHHHHHh
Confidence 99999999888888877776665543
No 3
>PRK11663 regulatory protein UhpC; Provisional
Probab=100.00 E-value=1.1e-42 Score=334.47 Aligned_cols=405 Identities=15% Similarity=0.152 Sum_probs=297.4
Q ss_pred chHHHHHHHHHHHHHHHHhhhchhhhhcchhhhhhcCCChhhHHHHHHHHHHHHHHhhhhhhhhhccccchHHHHHHHHH
Q 012902 41 SYKQIISLCVGNFEQIFIVFGQVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVW 120 (454)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~ 120 (454)
.++.+....++.++ ...++...++..+|.+.+++|.|..+.|++.+.+.+++.+++++.|+++||+|||+++..+.++
T Consensus 20 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~~~~~~~ 97 (434)
T PRK11663 20 WRRHILITMYLGYA--LFYFTRKSFNAAMPEMLADLGLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNARYFMGIGLIA 97 (434)
T ss_pred HHHHHHHHHHHHHH--HHHHhhhhHHHhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCchhHHHHHHH
Confidence 34455555555555 6778888889999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhhhcccccHHHHHHHHHHHHhhcccchhhhhHHHhhhcCccchHHHHHHHHhhHHHHHHhHHhHHHHHhhccC
Q 012902 121 WSIATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFG 200 (454)
Q Consensus 121 ~~~~~~l~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~ig~~l~~~l~~~~g 200 (454)
.+++.+++++++ |++.+++.|++.|++.|...+...+++.|++|+|+|++++++.+.+.++|..+++.+.+.+.+.+|
T Consensus 98 ~~~~~~~~~~~~--~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~g 175 (434)
T PRK11663 98 TGIINILFGFSS--SLWAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAIALHYG 175 (434)
T ss_pred HHHHHHHHHHHh--HHHHHHHHHHHHHHHHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc
Confidence 999999999999 999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cchhHHHHhHHHHHHHHHHHHhcCCCCCCCCCCChhh--hhhhhhccc-cCCCCCCcc-h-hHhhcCcchHHHHHHHHHH
Q 012902 201 WPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAE--KKLIVSSCA-SKEPVKTIP-W-GLILSKPPVWALIVSHFCH 275 (454)
Q Consensus 201 wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~-~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~ 275 (454)
||+.|++.+++.++..++..+..+|+|++......++ ++..+.+++ ++++.+..+ + +..+|+|.++...+..++.
T Consensus 176 w~~~f~~~~i~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (434)
T PRK11663 176 WRYGMMIAGIIAIVVGLFLCWRLRDKPQAMGLPSVGEWRHDALELAQQQEGAGLSRKEILTKYVLLNPYIWLLSFSYVLV 255 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCHhhcCCCCcccccccccccchhccccCCChhhhHHHHHhcChHHHHHHHHHHHH
Confidence 9999999888777665555556676654321111000 000000000 000001111 1 2356788899888888887
Q ss_pred HHHHHHHHhhHHHHHHHHhCCcccchhhHhHHHHHHHHHHHHHHHHHhhhhhhcCccchhhHHHHHHHHHHHHHHHHHHh
Q 012902 276 NWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQL 355 (454)
Q Consensus 276 ~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (454)
...+..+..|+|.|+++.+|+++.+++...+...++..+++++.|+++||+.+++... .......+.......+...
T Consensus 256 ~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~~g~~~~g~l~dr~~~~~r~~---~~~~~~~~~~~~~~~~~~~ 332 (434)
T PRK11663 256 YVVRAAINDWGNLYMSETLGVDLVTANSAVSMFELGGFIGALVAGWGSDKLFNGNRGP---MNLIFAAGILLSVGSLWLM 332 (434)
T ss_pred HHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCccH---HHHHHHHHHHHHHHHHHHc
Confidence 7888888899999998878999999999999999999999999999999994332100 0011111222111111111
Q ss_pred hccChhHHHHHHHHHHHhhhhhhcchhhhhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHH
Q 012902 356 SHVDSPAMAVLCMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGL 435 (454)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~ 435 (454)
...+........+.++.+.............+..++++++++.|+.+...++|++++|.+.|.+.|..||+..|+..+++
T Consensus 333 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~p~~~g~l~~~~g~~~~f~~~~~~ 412 (434)
T PRK11663 333 PFASYVMQAACFFTIGFFVFGPQMLIGMAAAECSHKEAAGAATGFVGLFAYLGAALSGYPLAKVLEIWHWTGFFVVISIA 412 (434)
T ss_pred ccccHHHHHHHHHHHHHHHhhHHHHHHHHHHhcccHhhHHhHHHHHHHHHHHHHHHhcccHHHHHHhcccHHHHHHHHHH
Confidence 22222222222222222211111111122234445679999999999999999999999999999999999999999998
Q ss_pred HHHHHHHHHHhccCCcc
Q 012902 436 YLVGTAVWNLFSTGEKV 452 (454)
Q Consensus 436 ~~~~~~~~~~~~~~~~~ 452 (454)
.+++.+..+...+++++
T Consensus 413 ~~~~~~~~~~~~~~~~~ 429 (434)
T PRK11663 413 AGISALLLLPFLNAQAP 429 (434)
T ss_pred HHHHHHHHHHHHhhhch
Confidence 88877766655554443
No 4
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=100.00 E-value=8.4e-43 Score=338.52 Aligned_cols=397 Identities=16% Similarity=0.141 Sum_probs=298.6
Q ss_pred ccchHHHHHHHHHHHHHHHHhhhchhhhhcchhhhhhcCCChhhHHHHHHHHHHHHHHhhhhhhhhhccccchHHHHHHH
Q 012902 39 HNSYKQIISLCVGNFEQIFIVFGQVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGV 118 (454)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~ 118 (454)
++..+.++.++++.+. ..+.++..+++..|.+.+|+|.|..+.|++.+.+.+++.+++++.|+++||+|||+++..+.
T Consensus 24 ~~~~~~i~~~~~~~~~--~~y~~r~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~ 101 (467)
T PRK09556 24 FKPFMQSYLVVFIGYL--TMYLIRKNFKAAQNDMISTYGLSTTELGMIGLGFSITYGVGKTLVGYYADGKNTKQFLPFLL 101 (467)
T ss_pred HHHHHHHHHHHHHHHH--HHHHHhcChhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhccCccchHHHHH
Confidence 3445667777777777 88899999999999999999999999999999999999999999999999999999998888
Q ss_pred HHHHHHHhhhhh-----cccccHHHHHHHHHHHHhhcccchhhhhHHHhhhcCccchHHHHHHHHhhHHHHHHhHHhHHH
Q 012902 119 VWWSIATALTPV-----AAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSP 193 (454)
Q Consensus 119 ~~~~~~~~l~~~-----~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~ig~~l~~ 193 (454)
++++++.++.++ ++ |++.+++.|+++|++.+...|...++++|++|+++||+++|+.+.+.++|.++++.+..
T Consensus 102 ~~~~~~~~~~~~~~~~~~~--~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~rg~a~gi~~~~~~lG~~l~~~i~~ 179 (467)
T PRK09556 102 ILSAICMLGFGASLGSGSV--SLGLMIALWALSGFFQSTGGPCSYSTITRWTPRRKRGRFLGFWNISHNLGGAGAGGVAL 179 (467)
T ss_pred HHHHHHHHHHHHHHhcccc--hHHHHHHHHHHHHHHHhccchHHHHHHHHHcCccceeeeEEeeecccchhhhHHHHHHH
Confidence 887777666554 57 89999999999999999999999999999999999999999999999999999999988
Q ss_pred HHhhcc---CcchhHHHHhHHHHHHHHHHHHhcCCCCCCCCCCChhhhhhh--hhccc--cCCCCCC-c-chhHhhcCcc
Q 012902 194 FLIHRF---GWPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLI--VSSCA--SKEPVKT-I-PWGLILSKPP 264 (454)
Q Consensus 194 ~l~~~~---gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~--~~~~~~~-~-~~~~~~~~~~ 264 (454)
++.+.. +||..|.+.+++.++..++.++..+++|++.+..++++.... ..+++ ++++... . ..+..+|+|.
T Consensus 180 ~~~~~~~~~~~~~~f~~~g~~~~~~~i~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 259 (467)
T PRK09556 180 WGANYFFDGHVIGMFIFPSIIALIIGFIGLRYGSDSPEELGWGKAEEIFGEPISEEDKETESTDMTKWQIFVEYVLKNPV 259 (467)
T ss_pred HHHHhhccCcchhHHHHHHHHHHHHHHHHHHhCCCChhhcCCCChhhcccCccchhhhccccccCcHHHHHHHHHHcChH
Confidence 776653 699999998888887767667666766654322211110000 00000 0011000 1 1223689999
Q ss_pred hHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCcccchhhHhHHHHHHHHHHHHHHHHHhhhhhhcCccchhhHHHHHHHH
Q 012902 265 VWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIG 344 (454)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~ 344 (454)
+|...+..++....+.+...|.|.|+++.+|+|+.+++.......++.+++++..|+++||+++|+.... ...
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~~~~~-------~~~ 332 (467)
T PRK09556 260 IWLLCFANIFLYIVRIGIDNWSPVYAFQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLANGRRALVA-------CIA 332 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHH-------HHH
Confidence 9999999999888888899999999999899999999999999999999999999999999998854221 111
Q ss_pred HHHHHHHHHHhhccChhH-HHHHHHHHHHhhhhhhcchhhhhhcccccccchhHHHHHHHHHHH-HHHHHHHHHHHHhc-
Q 012902 345 FLGPAFFLTQLSHVDSPA-MAVLCMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVL-AGVFGTAATGYILQ- 421 (454)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-g~~~~~~~~g~l~~- 421 (454)
..............++.. ..+..+..+.+.............+..|++.+|++.|+.+...++ |.+++|.+.|.+.|
T Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G~i~~~ 412 (467)
T PRK09556 333 LALIIFTLGVYQHATSEYMYLASLFALGFLVFGPQLLIGVAAVGFVPKKAIGVANGIKGTFAYLFGDSFAKVGLGMIADP 412 (467)
T ss_pred HHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhhHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhHHHHhhhHHHHhcc
Confidence 111111111112222332 223333333222222222122333556667999999999999997 77999999999999
Q ss_pred -----------cCCchhHHHHHHHHHHHHHHHHHHh
Q 012902 422 -----------HGSWDDVFKVSVGLYLVGTAVWNLF 446 (454)
Q Consensus 422 -----------~~g~~~~~~~~~~~~~~~~~~~~~~ 446 (454)
..+|+..|++..++.+++.+..+.+
T Consensus 413 ~~~g~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~ 448 (467)
T PRK09556 413 TKNGTPIFGYTLTGWAGTFAALDIAAIGCICLMAIV 448 (467)
T ss_pred cccccccccccccChHHHHHHHHHHHHHHHHHHHHH
Confidence 5789999999888888877666554
No 5
>PRK03545 putative arabinose transporter; Provisional
Probab=100.00 E-value=3.7e-41 Score=320.14 Aligned_cols=359 Identities=15% Similarity=0.164 Sum_probs=285.8
Q ss_pred hhchhhhhcchhhhhhcCCChhhHHHHHHHHHHHHHHhhhhhhhhhccccchHHHHHHHHHHHHHHhhhhhcccccHHHH
Q 012902 60 FGQVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFL 139 (454)
Q Consensus 60 ~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~l~~~~~~~~~~~l 139 (454)
.+.....+.+|.+.+|+|.|+++.|++.+.+.+++.+++++.|+++||+|||+++..+.++.+++++++++++ |++.+
T Consensus 23 ~~~~~~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~--~~~~l 100 (390)
T PRK03545 23 TTEFVPVGLLSDIAQSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNVERRKLLIGLFVLFIASHVLSALAW--NFTVL 100 (390)
T ss_pred hHHHHHHcchHHHHhHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHhc--cHHHH
Confidence 3334556678999999999999999999999999999999999999999999999999999999999999999 99999
Q ss_pred HHHHHHHHhhcccchhhhhHHHhhhcCccchHHHHHHHHhhHHHHHHhHHhHHHHHhhccCcchhHHHHhHHHHHHHHHH
Q 012902 140 LVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVW 219 (454)
Q Consensus 140 ~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~ig~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~ 219 (454)
+++|+++|++.+...+...+++.|++|+|+|++++|+...+.++|..+||++++.+.+++|||+.|++.++++++..+..
T Consensus 101 ~~~r~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~l~~~~~ 180 (390)
T PRK03545 101 LISRIGIAFAHAIFWSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVIGQYLGWRTTFLAIGGGALITLLLL 180 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHHHHhcHHHHHHHHHHHHHHHHHHH
Confidence 99999999999988999999999999999999999999999999999999999999999999999999998888776666
Q ss_pred HHhcCCCCCCCCCCChhhhhhhhhccccCCCCCCcchhHhhcCcchHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCccc
Q 012902 220 LSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLT 299 (454)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~ 299 (454)
....||++++++ ++ ..+.++.+|+|.++......++.....+....+.|.++++..|.++.
T Consensus 181 ~~~~~~~~~~~~----~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~ 241 (390)
T PRK03545 181 IKLLPLLPSEHS----GS---------------LKSLPLLFRRPALVSLYLLTVVVVTAHFTAYSYIEPFVQQVAGLSEN 241 (390)
T ss_pred HHhCCCCCCCCc----ch---------------HHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcc
Confidence 665565432211 00 12345688899988777766666666666778888899888899999
Q ss_pred chhhHhHHHHHHHHHHHHHHHHHhhhhhhcCccchhhHHHHHHHHHHHHHHHHHHhhccChhHHHHHHHHHHHhhhhhhc
Q 012902 300 ESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLCMACSQGTDAFSQ 379 (454)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (454)
+++.......++.+++++..+++.||+++|+ ....................+.........+.+.+... ..
T Consensus 242 ~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~--------~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~-~~ 312 (390)
T PRK03545 242 FATLLLLLFGGAGIIGSVLFSRLGNRHPSGF--------LLIAIALLLVCLLLLLPAANSEWHLSVLSIFWGIAIMC-IG 312 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccchhH--------HHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhc-ch
Confidence 9999999999999999999999999998772 12222222222222211222222233333333443322 22
Q ss_pred chhhhhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHHHHhcc
Q 012902 380 SGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWNLFST 448 (454)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 448 (454)
+.......+..|+++++++|+++...++|..+||.+.|.+.|+.|++..++..+.+.+++.+......+
T Consensus 313 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~G~~~~G~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 381 (390)
T PRK03545 313 LAMQVKVLKLAPDATDVAMALFSGIFNIGIGAGALLGNQVSLHLGLSSIGYVGAALALAALVWSILIFR 381 (390)
T ss_pred HHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChhHHHHHHHHHHHHHHHHHHHHcc
Confidence 333344445567889999999999999999999999999999999999999999999888877666654
No 6
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=100.00 E-value=3.2e-41 Score=321.68 Aligned_cols=384 Identities=18% Similarity=0.264 Sum_probs=290.0
Q ss_pred cchHHHHHHHHHHHHHHHHhhhchhhhhcchhhhhhcCCChhhHHHHHHHHHHHHHHhhhhhhhhhccccchHHHHHHHH
Q 012902 40 NSYKQIISLCVGNFEQIFIVFGQVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVV 119 (454)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~ 119 (454)
+.+|+...++++.+. ++++|+...+...|.+++|+|.+.++.|++.+++.+++.+++++.|+++||+|||+++..+.+
T Consensus 4 ~~~~~~~~~~~~~~~--~~~~d~~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~ 81 (412)
T TIGR02332 4 KLFRRLIIFLFILFI--FSFLDRINIGFAGLTMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAIIGARRWIAGIMV 81 (412)
T ss_pred eehhHHHHHHHHHHH--HHHhhhhhHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChHHHHHHHHH
Confidence 345667777777777 899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhhhcccccHHHHHHHHHHHHhhcccchhhhhHHHhhhcCccchHHHHHHHHhhHHHHHHhHHhHHHHHhh--
Q 012902 120 WWSIATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIH-- 197 (454)
Q Consensus 120 ~~~~~~~l~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~ig~~l~~~l~~-- 197 (454)
+++++.+++++++ |++.+++.|+++|++.+...+....++.|++|+|+|++++++++.+.++|..+++.+++.+.+
T Consensus 82 ~~~~~~~~~~~~~--~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~ 159 (412)
T TIGR02332 82 LWGIASTATMFAT--GPESLYLLRILVGIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYILALD 159 (412)
T ss_pred HHHHHHHHHHHhc--CHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 9999999999999 999999999999999999999999999999999999999999999999999999999998864
Q ss_pred ----ccCcchhHHHHhHHHHHHHHHHHHhcCCCCCCCCCCChhhhhhhhh----cc-c--cCC----CCC---CcchhHh
Q 012902 198 ----RFGWPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVS----SC-A--SKE----PVK---TIPWGLI 259 (454)
Q Consensus 198 ----~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~-~--~~~----~~~---~~~~~~~ 259 (454)
..|||+.|++.++++++..++.+++.||+|++.+...+++++...+ +. . +++ +.+ ...++++
T Consensus 160 ~~~~~~gwr~~f~~~~~~~l~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (412)
T TIGR02332 160 GLMALKGWQWLFLLEGFPSVILGVMTWFWLDDSPDKAKWLDEEDKKALKEMIDNDQLTLEQPEGAFAHAAMPQRSMLREI 239 (412)
T ss_pred CCCCccchhHHHHHHHHHHHHHHHHHhhccCCCcccCCCCCHHHHHHHHHHHHhccccccccccccccccccHHHHHHHh
Confidence 3699999999988888877777777888876533211221111100 00 0 000 000 1123333
Q ss_pred hcCcchHHHHHHHHHHHHHHHHHHhhHHHHHHHH-hCCcccchhhHhHHHHHHHHHHHHHHHHHhhhhhhcCccchhhHH
Q 012902 260 LSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQV-LHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRK 338 (454)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~ 338 (454)
++|.+|...+..++....++.+.+|+|.++++. .|+++.+++.......++.+++.+..|+++||+++|+..
T Consensus 240 -~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr~~~r~~~------ 312 (412)
T TIGR02332 240 -FTPAIMLYTLAYFCLTNTLSAINIWTPQILQSFNQGSSNIMIGLLAAIPQFCTIFGMIWWSRHSDRLKERKHH------ 312 (412)
T ss_pred -cChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHhHHHhhHHHHHHHHHHHHHHHHhcccCccHHH------
Confidence 367888888888888888999999999999883 467888899999999999999999999999999977421
Q ss_pred HHHHHHHHHHHHHHHHhhccChhHHHHHHHHHHHhhhhhhcchhhhhh-cccccccchhHHHHHHHHHHHHHHHHHHHHH
Q 012902 339 IMQSIGFLGPAFFLTQLSHVDSPAMAVLCMACSQGTDAFSQSGLYSNH-QDIAPRYSGVLLGLSNTAGVLAGVFGTAATG 417 (454)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g 417 (454)
............ .......+.............+.. ...+...... +..++++|+++.|+.+...++|++++|.+.|
T Consensus 313 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~a~g~~~~~~~~g~~~~p~~~g 390 (412)
T TIGR02332 313 TALPYLFAAAGW-LLASATDHNLIQLLGIIMASMGSF-SAMAIFWTTPDQSISLQARAIAIAVINATGNIGSALSPFLIG 390 (412)
T ss_pred HHHHHHHHHHHH-HHHHhcCCHHHHHHHHHHHHHHhh-hhhhHHHhhcccccchHHHHHHHHHHHHhhhhhhhhhhhhcc
Confidence 111111111111 111112222211111111111111 1112222222 3456689999999999999999999999999
Q ss_pred HHhccC-CchhHHHHHHHHH
Q 012902 418 YILQHG-SWDDVFKVSVGLY 436 (454)
Q Consensus 418 ~l~~~~-g~~~~~~~~~~~~ 436 (454)
.+.|.. +|+..+++.++..
T Consensus 391 ~i~~~~g~~~~~~~~~~~~~ 410 (412)
T TIGR02332 391 ILKDATGSFNSGLWFVAALL 410 (412)
T ss_pred cccccCCCCchhHHHHHHHH
Confidence 999985 5999988776654
No 7
>TIGR00893 2A0114 d-galactonate transporter.
Probab=100.00 E-value=5.6e-40 Score=313.37 Aligned_cols=386 Identities=25% Similarity=0.428 Sum_probs=302.2
Q ss_pred HHhhhchhhhhcchhhhhhcCCChhhHHHHHHHHHHHHHHhhhhhhhhhccccchHHHHHHHHHHHHHHhhhhhcccccH
Q 012902 57 FIVFGQVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGL 136 (454)
Q Consensus 57 ~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~l~~~~~~~~~ 136 (454)
.+.++...++...|.+.+++|.|+.+.+++.+++.++..++.++.|+++||+|||+++..+.++.+++..++++++ |+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~--~~ 82 (399)
T TIGR00893 5 INYLDRANLSFAAPMLQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQAFAG--AY 82 (399)
T ss_pred HHHHHHHhhhHhHHHHHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHHHHHc--CH
Confidence 4667888889999999999999999999999999999999999999999999999999999999999999999999 99
Q ss_pred HHHHHHHHHHHhhcccchhhhhHHHhhhcCccchHHHHHHHHhhHHHHHHhHHhHHHHHhhccCcchhHHHHhHHHHHHH
Q 012902 137 PFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWF 216 (454)
Q Consensus 137 ~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~ig~~l~~~l~~~~gwr~~f~~~~~~~~~~~ 216 (454)
+.++++|+++|++.+...+....++.|++|+|+|++++++.+...++|..+++.+++.+.+..+||+.|++.+++.++..
T Consensus 83 ~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 162 (399)
T TIGR00893 83 VSLYILRVLLGAAEAPFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILIHFSWQWAFIIEGVLGIIWG 162 (399)
T ss_pred HHHHHHHHHHHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999988888777
Q ss_pred HHHHHhcCCCCCCCCCCChhhhhhhhhc------cccCCCCCCcchhHhhcCcchHHHHHHHHHHHHHHHHHHhhHHHHH
Q 012902 217 TVWLSKAHSSPAEDPQLRPAEKKLIVSS------CASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYY 290 (454)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 290 (454)
++..+..||++++++..++++++...+. .+++++.+..+.++.+|+|+++...+..++..........+.|.|+
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (399)
T TIGR00893 163 VLWLKFIPDPPQKAKWLTEEEKYIVVGGLLAEQQGKGPSTPKKYQIKELLKDRRVWGLALGQFLVNIGLGFFLTWFPTYL 242 (399)
T ss_pred HHhhheecCCCCccccCCHHHHhhcchhhccccccccccCCCccchHHHhcCHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 7666666766554332222221111110 1111222344567788999999999999999999999999999999
Q ss_pred HHHhCCcccchhhHhHHHHHHHHHHHHHHHHHhhhhhhcCccchhhHHHHHHHHHHHHHHHHHHhhccChhHHHHHHHHH
Q 012902 291 NQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLCMAC 370 (454)
Q Consensus 291 ~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 370 (454)
++.+|.++.+.+.......++.+++.+..+++.||+++|+...... .....................+..+.......+
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (399)
T TIGR00893 243 VQERGLSILEAGFMASLPGIVGFIGMILGGRLSDLLLRRGKSLVFA-RKTAIIAGLVLSLLMFATNYVNIPYAALALVAL 321 (399)
T ss_pred HHHhcccHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHH-HHHHHHHHHHHHHHHHHhccchhHHHHHHHHHH
Confidence 9988999999999999999999999999999999999996222111 111111111112222222222233333333333
Q ss_pred HHhhhhhhcchhhhhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHhccCC-chhHHHHHHHHHHHHHHHHHH
Q 012902 371 SQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGS-WDDVFKVSVGLYLVGTAVWNL 445 (454)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g-~~~~~~~~~~~~~~~~~~~~~ 445 (454)
+.+.............+..|+++|+++.|+.+...++|..++|.+.|.+.|..| ++..+.+.++..+++.+...+
T Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 397 (399)
T TIGR00893 322 GFFGLGAGAIGWALISDNAPGNIAGLTGGLINSLGNLGGIVGPIVIGAIAATTGSFAGALMVVAALALIGALSYLL 397 (399)
T ss_pred HHhchhhhhHHHHHHHhhcChhHHHHHHHHHHHHHHHhhhhhhHHhhhhccCCCchhHHHHHHHHHHHHHHHHHHH
Confidence 333333333333344455666899999999999999999999999999999987 999999888888777665543
No 8
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=100.00 E-value=8.6e-40 Score=317.98 Aligned_cols=408 Identities=30% Similarity=0.513 Sum_probs=314.6
Q ss_pred ccchHHHHHHHHHHHHHHHHhhhchhhhhcchhhhh----------------------hcCCChhhHHHHHHHHHHHHHH
Q 012902 39 HNSYKQIISLCVGNFEQIFIVFGQVNMSIAILPMSA----------------------EFNWNPATVGLIQSSFFWGYLL 96 (454)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~----------------------~~~~s~~~~g~~~s~~~~~~~~ 96 (454)
.+.++.+..++.+++. .++.|+...+...+.+.+ |++.+..+.|++.+.+.+++.+
T Consensus 14 ~~~r~~i~~~~~~~~~--~~y~dr~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~ 91 (465)
T TIGR00894 14 CSFRLFLSFLLHICNV--IIIAQRICLSLTMVAMVNKENSTDLACLSAENELDNIKNPNFKWSGALQGLILSSHFYGQII 91 (465)
T ss_pred cCcHHHHHHHHHHHHH--HHHHHHhhheEEEEEcccCCCCCCccccccccccccccCCCCCCCHHHhhHHHHHHHHHHHH
Confidence 3455667777777777 789999999999888876 8899999999999999999999
Q ss_pred hhhhhhhhhccccchHHHHHHHHHHHHHHhhhhhcccccHHHHHHHHHHHHhhcccchhhhhHHHhhhcCccchHHHHHH
Q 012902 97 TQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLAL 176 (454)
Q Consensus 97 ~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~ 176 (454)
++++.|+++||+|||+++..+.++.+++.+++.++...+++.+++.|+++|++.+...+....+++|++|+++|++++++
T Consensus 92 ~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 171 (465)
T TIGR00894 92 IQIPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAAGGGIALVVFCRVIQGLAQGSVSPATHKIIVKWAPPKERSRLLGM 171 (465)
T ss_pred HHcchHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHhcccchhhHHHHHHhcCCHHHHHHHHHH
Confidence 99999999999999999999999999998887654211688899999999999999999999999999999999999999
Q ss_pred HHhhHHHHHHhHHhHHHHHhhcc-CcchhHHHHhHHHHHHHHHHHHhcCCCCCCCCCCChhhhhhhhhcccc-C-CCCCC
Q 012902 177 VYSGMYLGSVTGLAFSPFLIHRF-GWPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCAS-K-EPVKT 253 (454)
Q Consensus 177 ~~~~~~~g~~ig~~l~~~l~~~~-gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~ 253 (454)
...+..+|..+++++++.+.+.. |||+.|++.++++++..++.+...+|+|+++++.++++++...+..++ + +...+
T Consensus 172 ~~~~~~~g~~i~~~l~~~l~~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 251 (465)
T TIGR00894 172 STSGFQLGTFIFLPISGWLCESWGGWPMIFYVFGIVGCAWSLLWFVFPADDPSIHPCISKFEKKYINSSLQGQKGSTRQS 251 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccCCCCeehhhhhHHHHHHHHHHHHHhcCCcccCCCCCHHHHHHHHhhcccccCCCCCC
Confidence 99999999999999999999884 999999999998888877777777777755443333332222111111 1 11224
Q ss_pred cchhHhhcCcchHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCcccchhhHhHHHHHHHHHHHHHHHHHhhhhhhcCccc
Q 012902 254 IPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSV 333 (454)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~ 333 (454)
.++++++++|.+|...+..++.....+.+.+|+|.|+++.+|++..+.++......++..++.++.|+++||+++|+...
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~ 331 (465)
T TIGR00894 252 LPIKAIPKSLPVWAIWFAIFGHFWLYTILPTYLPTFISWVLRVSGKENGLLSSLPYLFAWLCSIFAGYLADFLKSSKTLS 331 (465)
T ss_pred CCHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCc
Confidence 56889999999999999999999999999999999999999999999999999999999999999999999998775543
Q ss_pred hhh-HHHHHHHHHHHHHHHHHHhhc-cChhHHHHHHHHHHHhhhhhhcchhhhhhcccccccchhHHHHHHHHHHHHHHH
Q 012902 334 TTV-RKIMQSIGFLGPAFFLTQLSH-VDSPAMAVLCMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVF 411 (454)
Q Consensus 334 ~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~ 411 (454)
... +......+............. ..........+.+..+......+.......+..|+.+|.+.|+.+..+++++.+
T Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~l~~~i 411 (465)
T TIGR00894 332 LTAARKIFNGIGGLGPGIFAYALPYLSAAFYLTIIILTLANAVSSGPLAGVLINSLDLAPRFLGFIKGITGLPGFIGGLI 411 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHhhhhhhhhhhchhhcChhHHHHHHHHHHHHHHHHHHH
Confidence 221 112222222222222211111 222333333333333333333333444455667789999999999999999999
Q ss_pred HHHHHHHHhcc---CCchhHHHHHHHHHHHHHHHHHHhcc
Q 012902 412 GTAATGYILQH---GSWDDVFKVSVGLYLVGTAVWNLFST 448 (454)
Q Consensus 412 ~~~~~g~l~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~ 448 (454)
+|.+.|.+.|. .+|...|.+.++..+++.++.....+
T Consensus 412 ~p~l~g~~~~~~~~~~~~~~f~~~~~~~~i~~i~~~~~~~ 451 (465)
T TIGR00894 412 ASTLAGNILSQDSKNVWLIVFLIMAFVNILCVIFYLIFGS 451 (465)
T ss_pred HHHhhheeeCCCCchHHHHHHHHHHHHHHHHHHHeeeeec
Confidence 99999998875 34788888888888887776665433
No 9
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=100.00 E-value=2.9e-39 Score=312.39 Aligned_cols=400 Identities=15% Similarity=0.175 Sum_probs=283.4
Q ss_pred chHHHHHHHHHHHHHHHHhhhchhhhhcchhhhhhcCCChhhHHHHHHHHHHHHHHhhhhhhhhhccccchHHHHHHHHH
Q 012902 41 SYKQIISLCVGNFEQIFIVFGQVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVW 120 (454)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~ 120 (454)
.+|.++..+++... ....++..++...|.+.++ |.|..+.+++.+.+.+++.+++++.|+++||+|||+++..+.++
T Consensus 26 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~p~l~~~-g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~~~~ 102 (452)
T PRK11273 26 LRWQIFLGIFFGYA--AYYLVRKNFALAMPYLVEQ-GFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLIL 102 (452)
T ss_pred HHHHHHHHHHHHHH--HHHHHHHHHHHhhHHHHHc-CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCchhHHHHHHH
Confidence 44555555555544 5667777778888999888 99999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhhhccc--ccHHHHHHHHHHHHhhcccchhhhhHHHhhhcCccchHHHHHHHHhhHHHHHH-hHHhHHHHHhh
Q 012902 121 WSIATALTPVAAK--LGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSV-TGLAFSPFLIH 197 (454)
Q Consensus 121 ~~~~~~l~~~~~~--~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~-ig~~l~~~l~~ 197 (454)
.+++.+++++++. .+++.+++.|++.|++.+...+.....+.|++|+|+|++++++++.+.++|.. .+|+++..+..
T Consensus 103 ~~i~~~~~~~~~~~~~~~~~~~~~~~l~gi~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~ 182 (452)
T PRK11273 103 AAAVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLFLLGMAW 182 (452)
T ss_pred HHHHHHHHHhhhcccccHHHHHHHHHHHHHHHhccchHHHHHHHHhCChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHH
Confidence 9999998877531 16788899999999999998888888999999999999999999999999874 45554444444
Q ss_pred ccCcchhHHHHhHHHHHHHHHHHHhcCCCCCCCCCCChhhhhhhhhccccCCCCCCcc-----hhHhhcCcchHHHHHHH
Q 012902 198 RFGWPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIP-----WGLILSKPPVWALIVSH 272 (454)
Q Consensus 198 ~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~ 272 (454)
..|||+.|++.+++.++..++..++.||+|++....++++.+....+..++++.++.+ .+..+|+|.+|...+..
T Consensus 183 ~~gw~~~f~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 262 (452)
T PRK11273 183 FNDWHAALYMPAFAAILVALFAFAMMRDTPQSCGLPPIEEYKNDYPDDYNEKHEQELTAKQIFMQYVLPNKLLWYIAIAN 262 (452)
T ss_pred hccHHHHHHHHHHHHHHHHHHHHHHccCCHhhcCCCChhhhhhccccccccccCCCccHHHHHHHHHHcChHHHHHHHHH
Confidence 4599999999988888776777777777665422111111100000000000001111 12367899999988888
Q ss_pred HHHHHHHHHHHhhHHHHHHHHhCCcccchhhHhHHHHHHHHHHHHHHHHHhhhhhhcCccchhhHHHHHHHHHHHHHHHH
Q 012902 273 FCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFL 352 (454)
Q Consensus 273 ~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (454)
++.....+....++|.|++++.|+++.+++.......++.+++.++.|+++||+++++... .......+.......
T Consensus 263 ~~~~~~~~~~~~~~P~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~~----~~~~~~~l~~~~~~~ 338 (452)
T PRK11273 263 VFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGA----TGVFFMTLVTIATIV 338 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcch----HHHHHHHHHHHHHHH
Confidence 8888888888999999999988999999999888889999999999999999995432111 011111111111111
Q ss_pred HHhhccChhH-HHHHHHHHHHhhhhhhcchhhhhhcccccccchhHHHHHHHHHHHHHHH-HHHHHHHHhccCCchhHHH
Q 012902 353 TQLSHVDSPA-MAVLCMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVF-GTAATGYILQHGSWDDVFK 430 (454)
Q Consensus 353 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~-~~~~~g~l~~~~g~~~~~~ 430 (454)
.......+.. .......++.+.............+..|++.+|++.|+.+...++|+.+ +|.+.|.+.|+.||+..|+
T Consensus 339 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~g~~v~g~l~~~~g~~~~f~ 418 (452)
T PRK11273 339 YWLNPAGNPTVDMACMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFM 418 (452)
T ss_pred HHHhcccChHHHHHHHHHHHHHHHhHHHHHHHHHHHHcChhhhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHhcchHHHH
Confidence 1111222222 2222222222221111111122335666789999999999999998765 7999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhc
Q 012902 431 VSVGLYLVGTAVWNLFS 447 (454)
Q Consensus 431 ~~~~~~~~~~~~~~~~~ 447 (454)
+.+++++++++....+.
T Consensus 419 ~~~~~~~~~~~~~~~~~ 435 (452)
T PRK11273 419 VMIGGSILAVILLIVVM 435 (452)
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 88888877766665443
No 10
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=100.00 E-value=5.1e-39 Score=300.22 Aligned_cols=359 Identities=13% Similarity=0.066 Sum_probs=265.0
Q ss_pred HhhhchhhhhcchhhhhhcCCChhhHHHHHHHHHHHHHHhhhhhhhhhccccchHHHHHHHHHHHHHHhhhhhcccccHH
Q 012902 58 IVFGQVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLP 137 (454)
Q Consensus 58 ~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~l~~~~~~~~~~ 137 (454)
+......+++.+|.+++|+|+|+.+.|++.+.+.+++.+++++.|+++||+|||+++..+......+.......+ |++
T Consensus 3 ~~~~~~~~~~~lp~i~~~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~--~~~ 80 (368)
T TIGR00903 3 SQAIWVTFSPVLSLVAEDIDVSKEELGLLAITYPAAFLALTIPSGLLLDRAFKRWFLFGSLATFAAAAGRLLDPF--NYE 80 (368)
T ss_pred hhHHHHHHHhhHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHhc--cHH
Confidence 455667789999999999999999999999999999999999999999999999987766555555443333347 899
Q ss_pred HHHHHHHHHHhhcccchhhhhHHHhhhcCccchHHHHHHHHhhHHHHHHhHHhHHHHHhhccCcchhHHHHhHHHHHHHH
Q 012902 138 FLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFT 217 (454)
Q Consensus 138 ~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~ig~~l~~~l~~~~gwr~~f~~~~~~~~~~~~ 217 (454)
.++++|+++|++.+. .+.....++|++|+|+|++++++.+.+..+|.++++++++.+.+++|||+.|++.++++++..+
T Consensus 81 ~l~~~R~l~G~g~~~-~~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~gWr~~f~~~~~l~~~~~~ 159 (368)
T TIGR00903 81 WLLACQLLAALGQPF-LLNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYTAGGLQLLIIPIAAVAAAGII 159 (368)
T ss_pred HHHHHHHHHHhHhHH-HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHH
Confidence 999999999999985 5666677799999999999999999999999999999999999999999999999999888878
Q ss_pred HHHHhcCCCCCCCCCCChhhhhhhhhccccCCCCCCcchhHhhcCcchHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCc
Q 012902 218 VWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFN 297 (454)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s 297 (454)
+.++..||+|+++++..+.+ + ...++++++|+|.+|...+..++....++++.+|+|.|+++ .|++
T Consensus 160 ~~~~~lp~~p~~~~~~~~~~-~------------~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~wlp~~L~~-~g~s 225 (368)
T TIGR00903 160 LVLAALPALPFQAAEGFGFK-D------------AVKEFGALAGRKDLWIIGAILGFGVALFDNLAIWLEAALRP-AGLE 225 (368)
T ss_pred HHHHHcCCCCCCCCCCcchH-H------------HHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCC
Confidence 88888888775432211000 0 01246779999999999999999999999999999999987 5787
Q ss_pred ccchhhHhHHHHHHHHHHHHHHHHHhhhhhhcCccchhhHHHHHHHHHHHHHHHHHHhhccChhHHHHHHHHHHHhhhhh
Q 012902 298 LTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLCMACSQGTDAF 377 (454)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 377 (454)
.. .+.......+.+.++ .++++||..||+... ..........+..........+.........+..++...
T Consensus 226 ~~-~~~~~~l~~~~g~~g---~~~~~d~~~r~~~r~-----~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 296 (368)
T TIGR00903 226 DI-AGDAVALAILAGLIG---VAVIPDRVARAGLRS-----IYIRAAALLIAAFFLALAFELNRLALFAFIGIAGLLMLP 296 (368)
T ss_pred hH-HHHHHHHHHHHHHHH---HHHhhHHhhhhhhHH-----HHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHhhhh
Confidence 64 555555555555544 578888876553211 111111111111111112222222222233322222323
Q ss_pred hcchhhhhh-cccccccchhHHHHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHHH
Q 012902 378 SQSGLYSNH-QDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWN 444 (454)
Q Consensus 378 ~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~ 444 (454)
..+....+. +..|++.|+++.|+.+...++++.++|.+.+.+.. +....|.+.++..+++.+...
T Consensus 297 ~~~~~~~~~~~~~p~~~rgt~~G~~~~~g~~~~~~~~~~~~~~~~--~~~~~f~~~~~~~~i~~~~~~ 362 (368)
T TIGR00903 297 AYAIIMDWIGKFCDKELHGKAAGAIGFTSRAISVALALAAMLFIS--SAEAYFTFLAILITIAFAIAL 362 (368)
T ss_pred hHHHHHHHHHHhcchhhcCcccchhhHHHHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHH
Confidence 333344444 44555799999999999999999999999998884 778888888888887777654
No 11
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=100.00 E-value=7.1e-39 Score=306.58 Aligned_cols=382 Identities=20% Similarity=0.231 Sum_probs=286.0
Q ss_pred cchHHHHHHHHHHHHHHHHhhhchhhhhcchhhhhhcCCChhhHHHHHHHHHHHHHHhhhhhhhhhccccchHHHHHHHH
Q 012902 40 NSYKQIISLCVGNFEQIFIVFGQVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVV 119 (454)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~ 119 (454)
+++|.+..++....+ .++++....+...|.+.+|+|.|+++.+++.+.+.++..+++++.|+++||+|||+++..+.+
T Consensus 11 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~ 88 (406)
T PRK11551 11 SRLALTIGLCFLVAL--LEGLDLQSAGVAAPRMAQEFGLDVAQMGWAFSAGILGLLPGALLGGRLADRIGRKRILIVSVA 88 (406)
T ss_pred hHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHH
Confidence 355555555555555 789999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhhhcccccHHHHHHHHHHHHhhcccchhhhhHHHhhhcCccchHHHHHHHHhhHHHHHHhHHhHHHHHhhcc
Q 012902 120 WWSIATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRF 199 (454)
Q Consensus 120 ~~~~~~~l~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~ig~~l~~~l~~~~ 199 (454)
+..++.+++++++ +++.+++.|+++|++.+...+...+++.|++|+|+|++++++.+.+..+|..+++.+++.+.+..
T Consensus 89 ~~~~~~~~~~~~~--~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 166 (406)
T PRK11551 89 LFGLFSLATAQAW--DFPSLLVARLLTGVGLGGALPNLIALTSEAVGPRLRGTAVSLMYCGVPFGGALASVIGVLAAGDA 166 (406)
T ss_pred HHHHHHHHHHHhc--cHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccc
Confidence 9999999999999 99999999999999999999999999999999999999999999999999999999999998889
Q ss_pred CcchhHHHHhHHHHHHHHHHHHhcCCCCCCCCCCChhhhhhhhhccccCCCCCCcchhHhhc---CcchHHHHHHHHHHH
Q 012902 200 GWPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILS---KPPVWALIVSHFCHN 276 (454)
Q Consensus 200 gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~ 276 (454)
+||+.|++.+++.++..+......||+++++++.++++.+ +...+..++ ++..+......++..
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (406)
T PRK11551 167 AWRHIFYVGGVGPLLLVPLLMRWLPESRAFAQAAGAGKQR-------------APVLRALFGEGRATATLLLWISYFFTL 233 (406)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHhCCCChhHHhccCcchhh-------------hhhHHHHhhhhhhhHHHHHHHHHHHHH
Confidence 9999999988777766666666677765432211110000 001111222 223344444555555
Q ss_pred HHHHHHHhhHHHHHHHHhCCcccchhhHhHHHHHHHHHHHHHHHHHhhhhhhcCccchhhHHHHHHHHHHHHHHHHHHhh
Q 012902 277 WGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLS 356 (454)
Q Consensus 277 ~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (454)
...+....+.|.++++ .|+++.+.+.......++.++++++.|++.||+++|+.. .. .............
T Consensus 234 ~~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~-------~~--~~~~~~~~~~~~~ 303 (406)
T PRK11551 234 IVLYFLLNWLPSLLVG-QGLSRSQAGLVQIAFNIGGALGSLLIGALMDRLRPRRVV-------LL--IYAGILASLAALA 303 (406)
T ss_pred HHHHHHHHHHHHHHHh-CCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHH-------HH--HHHHHHHHHHHHH
Confidence 6667778889999988 699999999999999999999999999999999988422 21 1111111111111
Q ss_pred ccCh-hHHHHHHHHHHHhhhhhhcchhhhhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHhcc-CCchhHHHHHHH
Q 012902 357 HVDS-PAMAVLCMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQH-GSWDDVFKVSVG 434 (454)
Q Consensus 357 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~-~g~~~~~~~~~~ 434 (454)
..++ ........+.+.+.............+..|+++|+++.|+.+...++|..++|.+.|.+.|+ .++...++....
T Consensus 304 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~~~ 383 (406)
T PRK11551 304 AAPSFAGMLLAGFAAGLFVVGGQSVLYALAPLFYPTQVRGTGVGAAVAVGRLGSMAGPLLAGQLLALGRSTVGVIGASIP 383 (406)
T ss_pred hcCcHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcchhhhhhhhhHHHHhhhHHHHHHhhhHhhhhccCCchHHHHHHHHH
Confidence 2222 22333333333333333333333344566778999999999999999999999999999998 455666666666
Q ss_pred HHHHHHHHHHHhcc
Q 012902 435 LYLVGTAVWNLFST 448 (454)
Q Consensus 435 ~~~~~~~~~~~~~~ 448 (454)
..+++.+..+...+
T Consensus 384 ~~~~~~~~~~~~~~ 397 (406)
T PRK11551 384 VILVAALAALLLVS 397 (406)
T ss_pred HHHHHHHHHHHHhc
Confidence 66665555554433
No 12
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=100.00 E-value=8.7e-39 Score=303.41 Aligned_cols=357 Identities=14% Similarity=0.156 Sum_probs=274.2
Q ss_pred hhhhhcchhhhhhcCCChhhHHHHHHHHHHHHHHhhhhhhhhhccccchHHHHHHHHHHHHHHhhhhhcccccHHHHHHH
Q 012902 63 VNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVV 142 (454)
Q Consensus 63 ~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~ 142 (454)
...++.+|.+++|+|+|.++.|++.+.+.+++.+++++.|+++||+|||+++..+..+++++.+++++++ |++.++++
T Consensus 26 ~~~~~~lp~i~~~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~G~r~~l~~~~~l~~~~~~~~~~a~--~~~~ll~~ 103 (393)
T PRK09705 26 TSVGPLLPQLRQASGMSFSVAALLTALPVVTMGGLALAGSWLHQHVSERRSVAISLLLIAVGALMRELYP--QSALLLSS 103 (393)
T ss_pred hccchhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCchHHHHHHHHHHHHHHHHHHHCc--chHHHHHH
Confidence 6678899999999999999999999999999999999999999999999999999999999999999999 99999999
Q ss_pred HHHHHhhcccchhhhhHHHhhhcCccchHHHHHHHHhhHHHHHHhHHhHHHHHhhcc-CcchhHHHHhHHHHHHHHHHHH
Q 012902 143 RVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRF-GWPSVFYSFGSLGTVWFTVWLS 221 (454)
Q Consensus 143 r~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~ig~~l~~~l~~~~-gwr~~f~~~~~~~~~~~~~~~~ 221 (454)
|+++|++.+...+....++.|++| |+|+++++++..+...|..+|+.+++.+.++. +||+.+.+.+...++..+..+.
T Consensus 104 r~l~Gig~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~~~~w~~~~~~~~~~~~~~~~~~~~ 182 (393)
T PRK09705 104 ALLGGVGIGIIQAVMPSVIKRRFQ-QRTPLVMGLWSAALMGGGGLGAAITPWLVQHSETWYQTLAWWALPAVVALFAWWW 182 (393)
T ss_pred HHHHHhHHHHHhhhhhHHHHHHcc-ccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999996 88999999999999999999999999998875 8999987766655544333333
Q ss_pred hcCCCCCCCCCCChhhhhhhhhccccCCCCCCcchhHhhcCcchHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCcccch
Q 012902 222 KAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTES 301 (454)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~ 301 (454)
..+++|+++++ + +.+.++.+|+|+.+...+..++....+.....|+|.|+++ +|.++.++
T Consensus 183 ~~~~~~~~~~~----~---------------~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~lp~~l~~-~g~s~~~a 242 (393)
T PRK09705 183 QSAREVASSHK----T---------------TTTPVRVVFTPRAWTLGVYFGLINGGYASLIAWLPAFYIE-IGASAQYS 242 (393)
T ss_pred HhcCCCccccC----C---------------CcCCcccccCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCChhhh
Confidence 22222211100 0 0011235577888877777777788888899999999998 79999999
Q ss_pred hhHhHHHHHHHHHHHHHHHHHhhhhhhcCccchhhHHHHHHHHHHHHHHHHHHhhccChhHHHHHHHHHHHhhhhhhcch
Q 012902 302 GLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLCMACSQGTDAFSQSG 381 (454)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (454)
+.......++.+++++..+++.||.++|+... ....+...+.........+.... ...+.+.+.+...+..
T Consensus 243 g~~~~~~~i~~i~g~~~~g~l~~r~~~~~~~~-------~~~~l~~~~~~~~~~~~~~~~~~--~~~l~g~g~g~~~~~~ 313 (393)
T PRK09705 243 GSLLALMTLGQAAGALLMPAMARHQDRRKLLM-------LALVLQLVGFCGFIWLPLQLPVL--WAMVCGLGLGGAFPLC 313 (393)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhhccchHHHH-------HHHHHHHHHHHHHHHccchHHHH--HHHHHHHhccchHHHH
Confidence 99999999999999999999999999884322 22212111111111111111221 2223333333333333
Q ss_pred hhhhhccccc-ccchhHHHHHHHHHHHHHHHHHHHHHHHhccC-CchhHHHHHHHHHHHHHHHHHHhccCCc
Q 012902 382 LYSNHQDIAP-RYSGVLLGLSNTAGVLAGVFGTAATGYILQHG-SWDDVFKVSVGLYLVGTAVWNLFSTGEK 451 (454)
Q Consensus 382 ~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 451 (454)
.....+..+| +++++..|+.+...+++..++|.+.|++.|.. +|...|.+.+++.++..++...+.++++
T Consensus 314 ~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (393)
T PRK09705 314 LLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRSISGNYLMDWAFHALCVVGLMIITLRFAPARF 385 (393)
T ss_pred HHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHhccccc
Confidence 3333455544 67999999999999999999999999999984 5888888888888777776666655544
No 13
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=100.00 E-value=1.1e-38 Score=311.41 Aligned_cols=368 Identities=14% Similarity=0.104 Sum_probs=288.7
Q ss_pred HHHHHHHHHHHHHHHHhhhchhhhhcchhhhhhcCCChhhHHHHHHHHHHHHHHhhhhhhhhhccccchHHHHHHHHHHH
Q 012902 43 KQIISLCVGNFEQIFIVFGQVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWS 122 (454)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~ 122 (454)
|..+..+.++.+ ...+|...++..+|.+.+|+|.+.++.+|+.+.|.++..++.+++|+++||+|||+++..+.++++
T Consensus 5 ~~~~~~~~~~~~--~~~ld~tiv~~a~p~i~~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l~~~~~~~~ 82 (495)
T PRK14995 5 WLTLVIIVLVYI--PVAIDATVLHVAAPTLSMTLGASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFKRLLMLGGTLFG 82 (495)
T ss_pred HHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHH
Confidence 445555555555 799999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhhhcccccHHHHHHHHHHHHhhcccchhhhhHHHhhhc-CccchHHHHHHHHhhHHHHHHhHHhHHHHHhhccCc
Q 012902 123 IATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWV-PVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGW 201 (454)
Q Consensus 123 ~~~~l~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~-~~~~rg~~~~~~~~~~~~g~~ig~~l~~~l~~~~gw 201 (454)
++++++++++ |++.++++|+++|+|.+...+.....+.+.+ |+++|++++|+......+|..+||.+++.+.++.||
T Consensus 83 ~~~~~~~~a~--~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~~~gw 160 (495)
T PRK14995 83 LASLAAAFSP--TASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILLEHFYW 160 (495)
T ss_pred HHHHHHHHcC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCh
Confidence 9999999999 9999999999999999998888888887776 678999999999999999999999999999999999
Q ss_pred chhHHHHhHHHHHHHHHHHHhcCCCCCCCCCCChhhhhh------------hhh--------------------------
Q 012902 202 PSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKL------------IVS-------------------------- 243 (454)
Q Consensus 202 r~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~-------------------------- 243 (454)
||.|++...++++..++..+..|++++++++..+..... ..+
T Consensus 161 r~~f~i~~~~~~~~~~l~~~~l~~~~~~~~~~~d~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~f~ 240 (495)
T PRK14995 161 GSVFLINVPIVLVVMGLTARYVPRQAGRRDQPLNLGHALMLIVAILLLVYSAKTALKGFLSLWVTSLTLLTGALLLGLFI 240 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCCChHhHHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHH
Confidence 999999988888877777777777654322211100000 000
Q ss_pred ccccCCCCCCcchhHhhcCcchHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCcccchhhHhHHHHHHHHHHHHHHHHHh
Q 012902 244 SCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIA 323 (454)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~ 323 (454)
..+.+.+.+..+ .+++|+|.++...+..++.....++...++|.|+++.+|+|+.++|+......++..++.++.|++.
T Consensus 241 ~~e~~~~~p~~~-~~lf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lq~v~g~s~~~ag~~~~~~~~~~~~~~~~~g~l~ 319 (495)
T PRK14995 241 RTQLAASRPMID-MRLFTHRIILSGVVMAMTAMITLVGFELLMAQELQFVHGLSPLEAGMFMLPVMVASGFSGPIAGILV 319 (495)
T ss_pred HHHhcCCCCCcC-HHHhCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 000111111223 3478999999888888888888888889999999999999999999999999999999999999999
Q ss_pred hhhhhcCccchhhHHHHHHHHHHHHHHHHH-HhhccChh-HHHHHHHHHHHhhhhhhcchhhhhhcccccccchhHHHHH
Q 012902 324 DTLVSKGLSVTTVRKIMQSIGFLGPAFFLT-QLSHVDSP-AMAVLCMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLS 401 (454)
Q Consensus 324 dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 401 (454)
||+++|+... ....+...+.... .....++. .......+.+.+.+....+......+..++++++.+.++.
T Consensus 320 ~r~g~~~~~~-------~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~g~~~~~~ 392 (495)
T PRK14995 320 SRLGLRLVAT-------GGMALSALSFYGLAMTDFSTQQWQAWGLMALLGFSAASALLASTSAIMAAAPPEKAAAAGAIE 392 (495)
T ss_pred HHcCchHHHH-------HHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCHHhcchHHHHH
Confidence 9999874221 1111111111111 11222222 3334445556555555555566666777889999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcc
Q 012902 402 NTAGVLAGVFGTAATGYILQH 422 (454)
Q Consensus 402 ~~~~~~g~~~~~~~~g~l~~~ 422 (454)
++.+++|+.+|+.+.|.+.++
T Consensus 393 ~~~~~lG~~~G~ai~g~i~~~ 413 (495)
T PRK14995 393 TMAYELGAGLGIAIFGLLLSR 413 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999998753
No 14
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=100.00 E-value=5.7e-38 Score=297.55 Aligned_cols=365 Identities=15% Similarity=0.180 Sum_probs=272.3
Q ss_pred HHHHHHHHHHHHHHHHhhhchhhhhcchhhhhhcCCChhhHHHHHHHHHHHHHHhhhhhhhhhccccchHHHHHHHHHHH
Q 012902 43 KQIISLCVGNFEQIFIVFGQVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWS 122 (454)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~ 122 (454)
+....+.+..+. .........+.+|++.+|+|.++++.++..+.+.++..+++++.|+++||+|||+++..+.++.+
T Consensus 20 ~~~~~~~~~~~~---~~~~~~~~~~~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~~~~~~~~~ 96 (394)
T PRK10213 20 SAVFSVAFCVAC---LIIVEFLPVSLLTPMAQDLGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRRYVVILFAVLLT 96 (394)
T ss_pred HHHHHHHHHHHH---HHHHHHHHHhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcHHHHHHHHHHHH
Confidence 333444444333 33344455567899999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhhhcccccHHHHHHHHHHHHhhcccchhhhhHHHhhhcCccchHHHHHHHHhhHHHHHHhHHhHHHHHhhccCcc
Q 012902 123 IATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWP 202 (454)
Q Consensus 123 ~~~~l~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~ig~~l~~~l~~~~gwr 202 (454)
++.+++++++ |++.+++.|+++|++.+...+...+++.|++|+|+|++++++...+.++|..+||++++.+.+.+|||
T Consensus 97 ~~~~~~~~~~--~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~gw~ 174 (394)
T PRK10213 97 LSCLLVSFAN--SFSLLLIGRACLGLALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGELIGWR 174 (394)
T ss_pred HHHHHHHHHC--hHHHHHHHHHHHHHhhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHH
Confidence 9999999998 99999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHhHHHHHHHHHHHHhcCCCCCCCCCCChhhhhhhhhccccCCCCCCcchhHhhcCcchHHHHHHHHHHHHHHHHH
Q 012902 203 SVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFIL 282 (454)
Q Consensus 203 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (454)
+.|++.++++++..+......||+++++++ + ..+.++.+|+|.++...+..++.....+..
T Consensus 175 ~~f~~~~~l~~~~~l~~~~~~p~~~~~~~~----~---------------~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 235 (394)
T PRK10213 175 NVFNAAAVMGVLCIFWIIKSLPSLPGEPSH----Q---------------KQNTFRLLQRPGVMAGMIAIFMSFAGQFAF 235 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCccccc----c---------------hhHHHHHhcCHHHHHHHHHHHHHHHHHHHH
Confidence 999998877776655544445554321110 0 112345788999988777666666666666
Q ss_pred HhhHHHHHHHHhCCcccchhhHhHHHHHHHHHHHHHHHHHhhhhhhcCccchhhHHHHHHHHHHHHHHHHHHhhccChhH
Q 012902 283 LTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPA 362 (454)
Q Consensus 283 ~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (454)
..+++.++.+.+|+++.+.+......+++.++++.+.+++.||.+++ .....................+...
T Consensus 236 ~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~iig~~~~~~l~~r~~~~--------~l~~~~~~~~~~~~~l~~~~~~~~~ 307 (394)
T PRK10213 236 FTYIRPVYMNLAGFGVDGLTLVLLSFGIASFVGTSLSSFILKRSVKL--------ALAGAPLVLAVSALVLTLWGSDKIV 307 (394)
T ss_pred HHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHhccchh--------HHHHHHHHHHHHHHHHHHHhhhHHH
Confidence 67764444445799999999999999999999999999999995433 1111111111111111111222222
Q ss_pred HHHHHHHHHHhhhhhhcchhh-hhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHH
Q 012902 363 MAVLCMACSQGTDAFSQSGLY-SNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTA 441 (454)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~ 441 (454)
......+.+.+.. ...+... ...+.. |+++++..+......++|..+||.+.|.+.|..|+...+...+++.++..+
T Consensus 308 ~~~~~~l~G~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~lg~~~G~~l~G~l~~~~g~~~~~~~~~~~~~~~~~ 385 (394)
T PRK10213 308 ATGVAIIWGLTFA-LVPVGWSTWITRSL-ADQAEKAGSIQVAVIQLANTCGAAIGGYALDNIGLTSPLMLSGTLMLLTAL 385 (394)
T ss_pred HHHHHHHHHHHHH-hhhHHHHHHHHHHC-cccHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChhhHHHHHHHHHHHHHH
Confidence 3333333443333 3334333 344444 566778888888889999999999999999999998888887766654443
No 15
>PRK03699 putative transporter; Provisional
Probab=100.00 E-value=2.5e-38 Score=300.94 Aligned_cols=376 Identities=14% Similarity=0.165 Sum_probs=285.6
Q ss_pred chHHHHHHHHHHHHHHHHhhhchhhhhcchhhhhhcCCChhhHHHHHHHHHHHHHHhhhhhhhhhccccchHHHHHHHHH
Q 012902 41 SYKQIISLCVGNFEQIFIVFGQVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVW 120 (454)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~ 120 (454)
++++....+...++ ..+.+....++.+|++.+++|+|+++.+++.+.+.+++.+++++.|++.||+|||+++..+.++
T Consensus 4 ~~~~~~~~~~~~~~--~~~~~~~~~g~~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~ 81 (394)
T PRK03699 4 NRIKLTWISFLSYA--LTGALVIVTGMVMGPIAEYFNLPVSSMSNTFTFLNAGILISIFLNAWLMEIIPLKRQLIFGFAL 81 (394)
T ss_pred hhHHHHHHHHHHHH--HHHHHHHHHhhhhHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 34455556666666 7888888899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhhhcccccHHHHHHHHHHHHhhcccchhhhhHHHhhhcCccchHHHHHHHHhhHHHHHHhHHhHHHHHhh-cc
Q 012902 121 WSIATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIH-RF 199 (454)
Q Consensus 121 ~~~~~~l~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~ig~~l~~~l~~-~~ 199 (454)
.+++.+++++++ +++.+++.|+++|++.+...+...+++.|++|+++|+++++..+...++|..++|.+.+.+.+ ..
T Consensus 82 ~~i~~~l~~~~~--~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~ 159 (394)
T PRK03699 82 MILAVAGLMFSH--SLALFSIAMFVLGVVSGITMSIGTFLITHVYEGKQRGSRLLFTDSFFSMAGMIFPIIAAYLLARSI 159 (394)
T ss_pred HHHHHHHHHHcc--hHHHHHHHHHHHHHhhHhhccchhHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 999999999999 999999999999999998899999999999999999999999999999999999999888764 57
Q ss_pred CcchhHHHHhHHHHHHHHHHHHhcCCCCCCCCCCChhhhhhhhhccccCCCCCCcchhHhhcCcchHHHHHHHHHHHHHH
Q 012902 200 GWPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGT 279 (454)
Q Consensus 200 gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (454)
|||+.|.+.+++.++..++.++ ++.|+.+++.++++ ++. .+ ...++.++...+..++....+
T Consensus 160 gw~~~f~~~~~~~~~~~~~~~~--~~~p~~~~~~~~~~-----------~~~----~~-~~~~~~~~~~~~~~~~~~~~~ 221 (394)
T PRK03699 160 EWYWVYACIGLVYVAIFILTLF--SEFPALGKHAPKAD-----------KPV----AK-EKWGIGVLFLAIAALLYILAQ 221 (394)
T ss_pred cHHHHHHHHHHHHHHHHHHHHh--cCCccccccCcccc-----------Ccc----cc-ccCChHHHHHHHHHHHHHHHH
Confidence 9999999988877766544433 22222111100000 000 01 112456677777777777778
Q ss_pred HHHHhhHHHHHHHHhCCcccchhhHhHHHHHHHHHHHHHHHHHhhhhhhcCccchhhHHHHHHHHHHHHHHHHHHhhccC
Q 012902 280 FILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVD 359 (454)
Q Consensus 280 ~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (454)
+.+..|+|.|+++.+|+|+.+++...+...++..++++..++++||+++|+... ............. ....+
T Consensus 222 ~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~l~-------~~~~~~~~~~~~~-~~~~~ 293 (394)
T PRK03699 222 LTFISWVPEYAQKKFGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFFDLQRILT-------VLAGLALVLMYLF-VNTDD 293 (394)
T ss_pred HHHHHHHHHHHHHHcCCChHHhhHHHHHHHHHHHHHHHHHHHHHHHhchhhHHH-------HHHHHHHHHHHHH-HHcCC
Confidence 888999999999889999999999999999999999999999999999985322 1111111111111 11222
Q ss_pred hhHHHHHHHHHHHhhhhhhcchhhhhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHHH
Q 012902 360 SPAMAVLCMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVG 439 (454)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~ 439 (454)
..+.....+..+.+... ..+.......+..|+++++..|......++|..++|.+.|++.|..|++..++..+++++++
T Consensus 294 ~~~~~~~~~~~G~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~p~~~G~l~~~~g~~~~~~~~~~~~~~~ 372 (394)
T PRK03699 294 PSHLLYAILGLGFFSSA-IYTTIITLGSQQTKVASPKLVNFILTCGTIGTMLTFVVTSPIVAHFGLQAALLTANGLYAVV 372 (394)
T ss_pred chHHHHHHHHHHHHHHH-HHHHHHHHHHHHccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHhCchhhhhhhHHHHHHH
Confidence 23333333344433332 33333444445556667788899999999999999999999999999999999888888777
Q ss_pred HHHHHHhc
Q 012902 440 TAVWNLFS 447 (454)
Q Consensus 440 ~~~~~~~~ 447 (454)
.+......
T Consensus 373 ~~~~~~~~ 380 (394)
T PRK03699 373 FVMCILLG 380 (394)
T ss_pred HHHHHHHH
Confidence 66544443
No 16
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=100.00 E-value=2.9e-38 Score=303.85 Aligned_cols=380 Identities=14% Similarity=0.083 Sum_probs=264.7
Q ss_pred HHHHHHHHHHHHHHhhhchhhhhcchhhhhhcC---CChhhHHHHHH---HHHHHHHHhhhhhhhhhccccchHHHHHHH
Q 012902 45 IISLCVGNFEQIFIVFGQVNMSIAILPMSAEFN---WNPATVGLIQS---SFFWGYLLTQIAGGIWADTVGGKAVLGFGV 118 (454)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~---~s~~~~g~~~s---~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~ 118 (454)
.+....++.. ++.+|...++...|.+.+|++ .+..+.+...+ ...++..++++++|+++||+|||+++..+.
T Consensus 23 ~~~~~~~~~~--~~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~Grr~~l~~~~ 100 (432)
T PRK10406 23 AIVGASSGNL--VEWFDFYVYSFCSLYFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKHGRKKSMLISV 100 (432)
T ss_pred HHHHHHHHHH--HHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHH
Confidence 4444445555 799999999999999999985 45554444444 444555599999999999999999999999
Q ss_pred HHHHHHHhhhhhcccccHH--------HHHHHHHHHHhhcccchhhhhHHHhhhcCccchHHHHHHHHhhHHHHHHhHHh
Q 012902 119 VWWSIATALTPVAAKLGLP--------FLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLA 190 (454)
Q Consensus 119 ~~~~~~~~l~~~~~~~~~~--------~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~ig~~ 190 (454)
++++++++++++++ ++. .++++|+++|++.|..++...++++|++|+|+|+++.++.+.+...|..+++.
T Consensus 101 ~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~rg~~~~~~~~~~~~G~~~~~~ 178 (432)
T PRK10406 101 CMMCFGSLVIACLP--GYETIGTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGRKGFYASFQYVTLIGGQLLALL 178 (432)
T ss_pred HHHHHHHHHHhhcC--CchhHHHHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhCCCCcccHHHHHHHHHHHHHHHHHHH
Confidence 99999999999998 664 58899999999999999999999999999999999999999888888888887
Q ss_pred HHHHHh--------hccCcchhHHHHhHHHHHHHHHHHHhcCCCCCCCCCCChhhhhhhhhccccCCCCCCcchhHhhcC
Q 012902 191 FSPFLI--------HRFGWPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSK 262 (454)
Q Consensus 191 l~~~l~--------~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (454)
+...+. +.+|||++|++.++++++.. ......||+++++. ++ ++ +..++++++|+
T Consensus 179 ~~~~~~~~~~~~~~~~~gWr~~F~i~~~~~ll~~-~~~~~~~e~~~~~~-----~~---------~~--~~~~~~~l~~~ 241 (432)
T PRK10406 179 VVVVLQQTLEDAELREWGWRIPFALGAVLAVVAL-WLRRQLDETSQQET-----RA---------LK--EAGSLKGLWRN 241 (432)
T ss_pred HHHHHHHhCCHHHHhccchHHHHHHHHHHHHHHH-HHHhcCCCCchHHH-----hh---------hc--ccccHHHHHhh
Confidence 765543 25799999998777766543 23333444432110 00 00 12356778888
Q ss_pred cchHHHHHHHHH-HHHHHHHHHhhHHHHHHHHhCCcccchhhHhHHHHHHHHHHHHHHHHHhhhhhhcCccchhhHHHHH
Q 012902 263 PPVWALIVSHFC-HNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQ 341 (454)
Q Consensus 263 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~ 341 (454)
|+.+...+...+ ....++.+..|+|.|+++.+|++..+.+.......+...++..+.|+++||++||+... .
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~grr~~~~-------~ 314 (432)
T PRK10406 242 RRAFIMVLGFTAAGSLCFYTFTTYMQKYLVNTAGMHANVASGIMTAALFVFMLIQPLIGALSDKIGRRTSML-------C 314 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHH-------H
Confidence 888776665544 36677888899999999888999988888888888888888999999999999885321 1
Q ss_pred HHHHH-HHHH-HHHHhhccChhHHHHHHHHHHHhhhhhhcchhhhhh-cccccccchhHHHHHHHHHHH-HHHHHHHHHH
Q 012902 342 SIGFL-GPAF-FLTQLSHVDSPAMAVLCMACSQGTDAFSQSGLYSNH-QDIAPRYSGVLLGLSNTAGVL-AGVFGTAATG 417 (454)
Q Consensus 342 ~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~-g~~~~~~~~g 417 (454)
..... .... ........++............+......+...... +..|++.|+++.|+.+...+. .+...|.+.+
T Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~fp~~~r~t~~g~~~~~g~~~~g~~~p~~~~ 394 (432)
T PRK10406 315 FGSLAALFTVPILSALQNVSSPYAAFGLVMCALLIVSFYTSISGILKAEMFPAQVRALGVGLSYAVANALFGGSAEYVAL 394 (432)
T ss_pred HHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCccchhhhHHHHHHHHHHHhHHHHHHH
Confidence 11111 1111 111111122222222222222222222222333433 455567899999999987665 3455778788
Q ss_pred HHhccCCchhHHHHHHHHHHHHHHHHHHhccCCcc
Q 012902 418 YILQHGSWDDVFKVSVGLYLVGTAVWNLFSTGEKV 452 (454)
Q Consensus 418 ~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 452 (454)
.+.+.+.+...+++.++..+++.+..++++++.|.
T Consensus 395 ~l~~~g~~~~~~~~~~~~~~i~~~~~~~l~~~~~~ 429 (432)
T PRK10406 395 SLKSIGMETAFFWYVTLMAVVAFLVSLMLHRKGKG 429 (432)
T ss_pred HHHHhCCCcHHHHHHHHHHHHHHHHHHHhhhcccc
Confidence 55444456667777777777776666666555544
No 17
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.2e-38 Score=301.22 Aligned_cols=376 Identities=39% Similarity=0.772 Sum_probs=329.1
Q ss_pred hhhcCCChhhHHHHHHHHHHHHHHhhhhhhhhhccccchHHHHHHHHHHHHHHhhhhhcccccHHHHHHHHHHHHhhccc
Q 012902 73 SAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMGIGEGV 152 (454)
Q Consensus 73 ~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~r~l~G~~~g~ 152 (454)
..+++.|..+.+++.+.+..|+.+++.+.|++.||+|.|+++..+.++.++++++..++...+++.+++.|++||++.|.
T Consensus 65 ~~~~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~~~~~~~~~R~lqGl~~g~ 144 (466)
T KOG2532|consen 65 AGEYDWSSTEKGLIFSSFFWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAASIGFYLLLVLRFLQGLGQGV 144 (466)
T ss_pred CceecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHhHHHHhH
Confidence 45789999999999999999999999999999999999999999999999999999988755677889999999999999
Q ss_pred chhhhhHHHhhhcCccchHHHHHHHHhhHHHHHHhHHhHHHHHhhc-cCcchhHHHHhHHHHHHHHHHHHhcCCCCCCCC
Q 012902 153 AMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHR-FGWPSVFYSFGSLGTVWFTVWLSKAHSSPAEDP 231 (454)
Q Consensus 153 ~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~ig~~l~~~l~~~-~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (454)
.+|....+.++|.|++||++..++..++..+|.+++.+++|.+.+. +||+..|++.++++++..++++.+..|+|.+++
T Consensus 145 ~~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~g~~g~i~~~~w~~~~~d~P~~h~ 224 (466)
T KOG2532|consen 145 LFPAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYVFGIVGLIWFILWFLFYSDSPSKHP 224 (466)
T ss_pred HHhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHHHHHHHHHHHHHHHHHHhcCCcccCC
Confidence 9999999999999999999999999999999999999999999998 999999999999999999999999999998888
Q ss_pred CCChhhhhhhhhccccCCCC--CCcchhHhhcCcchHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCcccchhhHhHHHH
Q 012902 232 QLRPAEKKLIVSSCASKEPV--KTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPW 309 (454)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~ 309 (454)
...++|.+....++.+++.+ ...|++++++++.+|...+..++...+.+.+..+.|.|+++.+|++..+.|++.++..
T Consensus 225 ~is~~El~~I~~~k~~~~~~~~~~vP~~~i~ts~~vwai~~~~f~~~~~~~~l~~y~PtY~~~VL~f~v~~~G~~salP~ 304 (466)
T KOG2532|consen 225 NISEKELKYIEKGKSEAHVKKKPPVPYKAILTSPPVWAIWISAFGGNWGFYLLLTYLPTYLKEVLGFDVRETGFLSALPF 304 (466)
T ss_pred CCCHHHHHHHHhcccccccCCCCCCCHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCChhhhhHHHHHHH
Confidence 77777777665554443333 4789999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhhhhhcCccchhhHHHHHHHHHHHHHHHHHHhhccC--hhHHHHHHHHHHHhhhhhhcchhhhhhc
Q 012902 310 LTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVD--SPAMAVLCMACSQGTDAFSQSGLYSNHQ 387 (454)
Q Consensus 310 ~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 387 (454)
+...+..+++|.++||+.+|..-....++..-.++..+.++.+......+ +.+..+.++.+..+..+...+....-..
T Consensus 305 l~~~~~k~~~g~lsD~l~~~~ls~t~~rkifn~i~~~~~ai~l~~l~~~~~~~~~~a~~~l~~~~~~~g~~~~Gf~~~~~ 384 (466)
T KOG2532|consen 305 LAMAIVKFVAGQLSDRLTFRILSETTVRKIFNTIAFGGPAVFLLVLAFTSDEHRLLAVILLTIAIGLSGFNISGFYKNHQ 384 (466)
T ss_pred HHHHHHHHHHHHHHHHHhhccCchHhHHHHHHhHHHHHHHHHHHeeeecCCCcchHHHHHHHHHHHHcccchhhhHhhhh
Confidence 99999999999999999887444445567777788877777776665544 3344555555555666666666665555
Q ss_pred ccccccchhHHHHHHHHHHHHHHHHHHHHHHHhcc---CCchhHHHHHHHHHHHHHHHHHHhcc
Q 012902 388 DIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQH---GSWDDVFKVSVGLYLVGTAVWNLFST 448 (454)
Q Consensus 388 ~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~ 448 (454)
+..|++.+..+|+.+....+.++++|.+.|.+... ..|+.+|.+.+++.+++.+++.++.+
T Consensus 385 ~~apq~a~~l~g~~~~~~~~~~~~~P~~vg~~~~~~t~~eW~~VF~i~a~i~~~~~i~f~~f~s 448 (466)
T KOG2532|consen 385 DIAPQHAGFVMGIINFVGALAGFIAPLLVGIIVTDNTREEWRIVFLIAAGILIVGNIIFLFFGS 448 (466)
T ss_pred hccchHHHHHHHHHHHHHHHHHHHHHHheeeEeCCCCHHHHHHHHHHHHHHHHHhchheeEeec
Confidence 55889999999999999999999999999999943 47999999999999999988777744
No 18
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=100.00 E-value=2.8e-38 Score=304.55 Aligned_cols=404 Identities=15% Similarity=0.189 Sum_probs=289.9
Q ss_pred hHHHHHHHHHHHHHHHHhhhchhhhhcchhhhhhcCCChhhHHHHHHHHHHHHHHhhhhhhhhhccccchHHHHHHHHHH
Q 012902 42 YKQIISLCVGNFEQIFIVFGQVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWW 121 (454)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~ 121 (454)
++..+....+.+. ....++..+....|.+++ +|.|+++.+++.+++.++..+++++.|+++||+|||+++..+.++.
T Consensus 25 ~~~~~~~~~~~~~--~~~~~~~~~~~~~p~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~~~ 101 (438)
T TIGR00712 25 RWQVFLGIFFGYA--AYYLVRKNFALAMPYLVE-QGFSKGELGFALSAISIAYGFSKFIMGSVSDRSNPRVFLPAGLILS 101 (438)
T ss_pred HHHHHHHHHHHHH--HHHHHhccHHhhhHHHHH-cCCCHhHhHHHHHHHHHHHHHhhhccchhhhccCCceehHHHHHHH
Confidence 3455555555555 667777777777888776 5999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhhhccc--ccHHHHHHHHHHHHhhcccchhhhhHHHhhhcCccchHHHHHHHHhhHHHHHHhHHhHHHHHh-hc
Q 012902 122 SIATALTPVAAK--LGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLI-HR 198 (454)
Q Consensus 122 ~~~~~l~~~~~~--~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~ig~~l~~~l~-~~ 198 (454)
+++.++.++.+. .+++.+.+.|++.|++.+..++.....+.|++|+++|++++++.+.+.++|..+++.+.+... ++
T Consensus 102 ~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~~ 181 (438)
T TIGR00712 102 AAVMLLMGFVPWATSSIAIMFVLLFLNGWFQGMGWPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLLGMAWF 181 (438)
T ss_pred HHHHHHHhccccccchHHHHHHHHHHHHHHhhcchHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHHHHHHHHh
Confidence 999888776421 167788899999999999999999999999999999999999999999999999988877644 45
Q ss_pred cCcchhHHHHhHHHHHHHHHHHHhcCCCCCCCCCCChhhhhhhhhc--ccc-CCCC-CCcc-hhHhhcCcchHHHHHHHH
Q 012902 199 FGWPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSS--CAS-KEPV-KTIP-WGLILSKPPVWALIVSHF 273 (454)
Q Consensus 199 ~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~-~~~~-~~~~~~~~~~~~~~~~~~ 273 (454)
.+||+.|++.++++++..++.++..||+|++++..+.++.+....+ .++ +++. .+.. .+..+|++.++...+..+
T Consensus 182 ~~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (438)
T TIGR00712 182 NDWHAALYFPAICAIIVALFAFAMMRDTPQSCGLPPIEEYRNDYPDDYNEKAEQELTAKEIFMQYVLPNKLLWYIAIANV 261 (438)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHhccCCHHhcCCCCchhcccccccccccccccccchHHHHHHHHccCchHHHHHHHHH
Confidence 7999999999988888777667777776543211110000000000 000 0000 0111 124678999998888888
Q ss_pred HHHHHHHHHHhhHHHHHHHHhCCcccchhhHhHHHHHHHHHHHHHHHHHhhhhhhcCccchhhHHHHHHHHHHHHHHHHH
Q 012902 274 CHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLT 353 (454)
Q Consensus 274 ~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (454)
+.....++...++|.|+++..|+++.++++......+.++++++..|++.||+++++....+ ..............
T Consensus 262 ~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~----~~~~~~~~~~~~~~ 337 (438)
T TIGR00712 262 FVYLLRYGVLDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFKGNRGATG----VFFMTLVTIAVIVY 337 (438)
T ss_pred HHHHHHHHHHHhHHHHHHHccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccHHH----HHHHHHHHHHHHHH
Confidence 88888888889999999998899999999999999999999999999999999755322211 00111111111111
Q ss_pred HhhccChhHHH-HHHHHHHHhhhhhhcchhhhhhcccccccchhHHHHHHHHHHHHH-HHHHHHHHHHhccCCchhHHHH
Q 012902 354 QLSHVDSPAMA-VLCMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAG-VFGTAATGYILQHGSWDDVFKV 431 (454)
Q Consensus 354 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~-~~~~~~~g~l~~~~g~~~~~~~ 431 (454)
......+.+.. ...+..+.+..+..........+..++++||++.|+.+...++++ .++|.+.|.+.|+.||+..+++
T Consensus 338 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~gg~~~gp~l~G~l~~~~g~~~~~~~ 417 (438)
T TIGR00712 338 WMNPAGNPLVDMICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMV 417 (438)
T ss_pred HhcCCCchHHHHHHHHHHHHHHccHHHHHHHHHHHhcChhheeeehhhhchHHHhhhhhhcchhHHHHHHhccchHHHHH
Confidence 11111222222 222222222111111111223355666899999999999988875 6899999999999999999999
Q ss_pred HHHHHHHHHHHHHHhccCCcc
Q 012902 432 SVGLYLVGTAVWNLFSTGEKV 452 (454)
Q Consensus 432 ~~~~~~~~~~~~~~~~~~~~~ 452 (454)
.++..+++.+..+.+.+++|+
T Consensus 418 ~~~~~~~~~~~~~~~~~~~~~ 438 (438)
T TIGR00712 418 MIGGSILAVILLIVVMIGEKR 438 (438)
T ss_pred HHHHHHHHHHHHHHHHhhccC
Confidence 888888888888777777764
No 19
>PRK10091 MFS transport protein AraJ; Provisional
Probab=100.00 E-value=4.9e-38 Score=297.63 Aligned_cols=364 Identities=15% Similarity=0.178 Sum_probs=273.9
Q ss_pred HHhhhchhhhhcchhhhhhcCCChhhHHHHHHHHHHHHHHhhhhhhhhhccccchHHHHHHHHHHHHHHhhhhhcccccH
Q 012902 57 FIVFGQVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGL 136 (454)
Q Consensus 57 ~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~l~~~~~~~~~ 136 (454)
..........+.+|.+++|+|.|.++.|++.+.+.+++.+++++.|+++||+|||+++..+.++.+++.+++++++ |+
T Consensus 14 ~~~~~~~~~~~~l~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~l~~~~~--~~ 91 (382)
T PRK10091 14 GLGMAEFGIMGVLTELAHDVGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIGNAMFTLSS--SY 91 (382)
T ss_pred HHHhhHHHHHhChHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHHHHhC--cH
Confidence 3666777888899999999999999999999999999999999999999999999999999999999999999999 99
Q ss_pred HHHHHHHHHHHhhcccchhhhhHHHhhhcCccchHHHHHHHHhhHHHHHHhHHhHHHHHhhccCcchhHHHHhHHHHHHH
Q 012902 137 PFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWF 216 (454)
Q Consensus 137 ~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~ig~~l~~~l~~~~gwr~~f~~~~~~~~~~~ 216 (454)
+.+++.|+++|++.+...+....++.|++|+++|++++++...+..+|..+|+++++.+.+..|||+.|++.+++.++..
T Consensus 92 ~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~ 171 (382)
T PRK10091 92 LMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQEFSWRYTFLLIAVFNIAVL 171 (382)
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHhhhccHHHHHHHHHHHHHHHH
Confidence 99999999999999988888899999999999999999999999999999999999999998999999999998877776
Q ss_pred HHHHHhcCCCCCCCCCCChhhhhhhhhccccCCCCCCcchhHhhcCcchHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCC
Q 012902 217 TVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHF 296 (454)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~ 296 (454)
+..++..||.+++++. +. +.. .+.+|++..+......++.....+....+++.++++..|+
T Consensus 172 ~~~~~~lp~~~~~~~~---~~---------------~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 232 (382)
T PRK10091 172 ASIYFWVPDIRDEAKG---GL---------------REQ-FHFLRSPAPWLIFAATMFGNAGVFAWFSYIKPYMMFISGF 232 (382)
T ss_pred HHHHHhCCCCCccccc---CH---------------HHH-HHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 6666666765422111 00 011 1256777777666655555555556667778888887899
Q ss_pred cccchhhHhHHHHHHHHHHHHHHHHHhhhhhhcCccchhhHHHHHHHHHHHHHHHHHHhhccChhHHHHHHHHHHHhhhh
Q 012902 297 NLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLCMACSQGTDA 376 (454)
Q Consensus 297 s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (454)
++.+.++......++.++++++.+++.||+++|+... ............................+.+.+...
T Consensus 233 s~~~~~~~~~~~~~~~~ig~~~~g~l~~r~~~~~~~~-------~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 305 (382)
T PRK10091 233 SETSMTFIMMLVGLGMVLGNLLSGRLSGRYSPLRIAA-------VTDFIIVLALLMLFFFGGMKTASLIFAFICCAGLFA 305 (382)
T ss_pred CHHHHHHHHHHHHHHHHHHhHHHheeccccCchhHHH-------HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999885322 111111111111111122222222333333333333
Q ss_pred hhcchhhhhhcccc-cccchhHHHHHHHHHHHHHHHHHHHHHHHhcc-CCchhHHHHHHHHHHHHHHHHHHhccCC
Q 012902 377 FSQSGLYSNHQDIA-PRYSGVLLGLSNTAGVLAGVFGTAATGYILQH-GSWDDVFKVSVGLYLVGTAVWNLFSTGE 450 (454)
Q Consensus 377 ~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 450 (454)
...+......++.+ ++.++.+ ..+...++|.++||.+.|.+.|. .+|+..+...+++.++.......+.++|
T Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~~~Gp~~~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (382)
T PRK10091 306 LSAPLQILLLQNAKGGELLGAA--GGQIAFNLGSAIGAYCGGMMLTLGLAYNYVALPAALLSFAAMSSLLLYGRYK 379 (382)
T ss_pred hhHHHHHHHHHhCCcchHHHHH--HHHHHHHHHHHHHHHHhHHHHHcccCcchHHHHHHHHHHHHHHHHHHHhhhh
Confidence 33333323333333 3445544 34677899999999999999996 7899999988877776665554444333
No 20
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=100.00 E-value=2.4e-37 Score=295.78 Aligned_cols=381 Identities=14% Similarity=0.089 Sum_probs=284.8
Q ss_pred HHHHHHHHHHHHHHHHhhhchhhhhcchhhhhhcCCChhhHHHHHHHHHHHHHHhhhhhhhhhccccchHHHHHHHHHHH
Q 012902 43 KQIISLCVGNFEQIFIVFGQVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWS 122 (454)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~ 122 (454)
..++..+.+...++...++...+.+.+|.+.+++|.|..+.++..+.+.+++.+++++.|+++||+|||+++..+..+.+
T Consensus 10 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~ 89 (406)
T PRK15402 10 QALLFPLCLVLFEFATYIANDMIQPGMLAVVEDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVAFFI 89 (406)
T ss_pred HHHHHHHHHHHHHHHHHhhhhhHhcchHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHH
Confidence 34444444444444677788888889999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhhhcccccHHHHHHHHHHHHhhcccchhhhhHHHhhhcCccchHHHHHHHHhhHHHHHHhHHhHHHHHhhccCcc
Q 012902 123 IATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWP 202 (454)
Q Consensus 123 ~~~~l~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~ig~~l~~~l~~~~gwr 202 (454)
++.+++++++ +++.+++.|+++|++.+...+...+++.|++|+++|++..++......+|..+||.+++.+.++.+||
T Consensus 90 ~~~~~~~~~~--~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~~w~ 167 (406)
T PRK15402 90 LTCLAILLAQ--SIEQFTLLRFLQGIGLCFIGAVGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGAALIHVLPWR 167 (406)
T ss_pred HHHHHHHHHc--cHHHHHHHHHHHHhHhhhHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcc
Confidence 9999999999 99999999999999999888999999999999999999999999888999999999999999989999
Q ss_pred hhHHHHhHHHHHHHHHHHHhcCCCCCCCCCCChhhhhhhhhccccCCCCCCcchhHhhcCcchHHHHHHHHHHHHHHHHH
Q 012902 203 SVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFIL 282 (454)
Q Consensus 203 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (454)
+.|++.+++.++..+..++..||+++++++..+. + +...+++..+++|+++...+..++........
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (406)
T PRK15402 168 GMFVLFAALAALSFFGLWRAMPETAGRVGEKLSL-K------------ELGRDYKLVLKNRRFVAGALALGLVSLPLLAW 234 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCccccccccH-H------------HHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHH
Confidence 9999988888877666666666654322111000 0 01234567889999998888777777767777
Q ss_pred HhhHHHHHHHHhCCcccchhhHhHHHHHHHHHHHHHHHHHhhhhhhcCccchhhHHHHHHHHHHHHHHHHHHh---hccC
Q 012902 283 LTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQL---SHVD 359 (454)
Q Consensus 283 ~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~ 359 (454)
..+.|.++++.+|.++.+.+.......++.+++.++.+++.||+++|+... ........+...... ....
T Consensus 235 ~~~~p~~~~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~~r~~~~~~~~-------~~~~~~~~g~~~~~~~~~~~~~ 307 (406)
T PRK15402 235 IALSPVILISGEQLSSYEYGLLQVPVFGALIAGNLTLARLTSRRPLRSLIR-------MGLWPMVAGLLLAALATVISSH 307 (406)
T ss_pred HHHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHH-------HHHHHHHHHHHHHHHHHHcccc
Confidence 778899988888999999998888888888999999999999999884322 111111111111111 1122
Q ss_pred hhHH-HHHHHHHHHhhhhhhcchhhhhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHH
Q 012902 360 SPAM-AVLCMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLV 438 (454)
Q Consensus 360 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~ 438 (454)
..++ .....+.+.+.+.. .+.........+++++|++.+..+..+.++..+|+.+.+.+.+..+.....+..++..++
T Consensus 308 ~~~~~~~~~~~~g~g~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~ 386 (406)
T PRK15402 308 AYLWLTAGLSLYAFGIGLA-NAGLYRLTLFSSDVSKGTVSAAMGMLSMLIFTVGIELSKHAYLGGGNGLFNLFNLANGLL 386 (406)
T ss_pred cHHHHHHHHHHHHHHHHHH-hhhHHHHHhhhccccccHHHHHHHHHHHHHHHHHHHHHHhcccCCchHHHHHHHHHHHHH
Confidence 2222 22333333333332 233333333445688999999999999999999999999999987665544444444444
Q ss_pred HHHHHHHh
Q 012902 439 GTAVWNLF 446 (454)
Q Consensus 439 ~~~~~~~~ 446 (454)
.......+
T Consensus 387 ~~~~~~~~ 394 (406)
T PRK15402 387 WLLLVRIF 394 (406)
T ss_pred HHHHHHHH
Confidence 43333333
No 21
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=100.00 E-value=2.7e-38 Score=299.69 Aligned_cols=360 Identities=17% Similarity=0.164 Sum_probs=275.7
Q ss_pred HhhhchhhhhcchhhhhhcCCChhhHHHHHHHHHHHHHHhhhhhhhhhccccchHHHHHHHHHHHHHHhhhhhcccccHH
Q 012902 58 IVFGQVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLP 137 (454)
Q Consensus 58 ~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~l~~~~~~~~~~ 137 (454)
........++..|.+.+|+|.|+++.|++.+++.+++.+++++.|+++||+|||+++..+.++.+++.+++++++ |++
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~~~~~~~~~~~~~~~~~~~--~~~ 92 (377)
T TIGR00890 15 TSGYVYTWTLLAPPLGRYFGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKFGPRAVAMLGGILYGLGFTFYAIAD--SLA 92 (377)
T ss_pred HhhHHhhhhhHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHcCccchhHHhHHHHHHHHHHHHHHH--HHH
Confidence 333456778899999999999999999999999999999999999999999999999999999999999999999 999
Q ss_pred HHHHHHHHHHhhcccchhhhhHHHhhhcCccchHHHHHHHHhhHHHHHHhHHhHHHHHhhccCcchhHHHHhHHHHHHHH
Q 012902 138 FLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFT 217 (454)
Q Consensus 138 ~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~ig~~l~~~l~~~~gwr~~f~~~~~~~~~~~~ 217 (454)
.++++|++.|++.+...+.....+.|++| |+|+++.++...+.++|..+++++.+.+.+..|||+.|++.+++.++..+
T Consensus 93 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~ 171 (377)
T TIGR00890 93 ALYLTYGLASAGVGIAYGIALNTAVKWFP-DKRGLASGIIIGGYGLGSFILSPLITSVINLEGVPAAFIYMGIIFLLVIV 171 (377)
T ss_pred HHHHHHHHHhHHHHHHHHhHHHHHHHHcC-cccHHHHHHHHHhcchhHhHHHHHHHHHHhcccHHHHHHHHHHHHHHHHH
Confidence 99999999999999888888889999996 68999999999999999988888888888888999999999998888777
Q ss_pred HHHHhcCCCCCCCCCCChhhhhhhhhccccCCCCCCcchhHhhcCcchHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCc
Q 012902 218 VWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFN 297 (454)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s 297 (454)
..++..+++++++.+.+++. +.++.+.++.+|+|+++...+..++..........+.+.|.++ +|.+
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 238 (377)
T TIGR00890 172 LGAFLIGYPPGQLIKTNIEV------------SVKDYTVWEMLRTPQFWVLYLSFFLNAVSGLLLIGLYKPYGQS-LGLS 238 (377)
T ss_pred HHHHheecCchhccccCccc------------chhhhhHHHHHcCccHHHHHHHHHHHhHHHHHHHHHHHHHHHH-cCCC
Confidence 76666655443221111000 0012245668889998887777777666666666777778766 6888
Q ss_pred ccchhhHhHHHHHHHHHHHHHHHHHhhhhhhcCccchhhHHHHHHHHHHHHHHHHHHhhccChhHHH-HHHHHHHHhhhh
Q 012902 298 LTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMA-VLCMACSQGTDA 376 (454)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 376 (454)
+.+.+.......++.+++++..|++.||++||+... ........................ ....+.+.+.+.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~ 311 (377)
T TIGR00890 239 DGFLVLAVSISSIFNGGGRPFLGALSDKIGRQKTMS-------IVFGISAVGMAAMLFIPMLNDVLFLATVALVFFTWGG 311 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhh-------HHHHHHHHHHHHHHHcccchhHHHHHHHHHHHHHhcc
Confidence 888999999999999999999999999999985432 111111111111111111122222 222333333332
Q ss_pred hhcchhhhhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHH
Q 012902 377 FSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGT 440 (454)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~ 440 (454)
..........+..++++|+++.|+.+...++|..++|.+.|.+.|+.||+..|.+.+++.+++.
T Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~f~~~~~~~~~~~ 375 (377)
T TIGR00890 312 TISLFPSLVSDIFGPANSAANYGFLYTAKAVAGIFGGLIASHALTEIGFEYTFIVTGAFALTSL 375 (377)
T ss_pred chhccHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHhc
Confidence 2222223344556678999999999999999999999999999999999999998887776654
No 22
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=100.00 E-value=2.2e-37 Score=302.03 Aligned_cols=389 Identities=15% Similarity=0.134 Sum_probs=264.0
Q ss_pred HHHHHHHHHHHHHHHHhhhchhhhhcchhhhhhcCCChhh-HHH-----HHHHHHHHHHHhhhhhhhhhccccchHHHHH
Q 012902 43 KQIISLCVGNFEQIFIVFGQVNMSIAILPMSAEFNWNPAT-VGL-----IQSSFFWGYLLTQIAGGIWADTVGGKAVLGF 116 (454)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~-~g~-----~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~ 116 (454)
++......++.+ ++.+|...++...|.+.++++.+.++ .++ +.++..+++.+++++.|+++||+|||+++..
T Consensus 15 ~~~~~~~~~g~~--~~~~d~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~ 92 (490)
T PRK10642 15 RKAITAASLGNA--MEWFDFGVYGFVAYALGKVFFPGADPSVQMIAALATFSVPFLIRPLGGLFFGMLGDKYGRQKILAI 92 (490)
T ss_pred HHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHH
Confidence 345555666666 79999999999999999998644322 222 2477889999999999999999999999999
Q ss_pred HHHHHHHHHhhhhhcccccHHH--------HHHHHHHHHhhcccchhhhhHHHhhhcCccchHHHHHHHHhhHHHHHHhH
Q 012902 117 GVVWWSIATALTPVAAKLGLPF--------LLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTG 188 (454)
Q Consensus 117 ~~~~~~~~~~l~~~~~~~~~~~--------l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~ig 188 (454)
++++++++++++++++ |+++ ++++|+++|++.|..++...++++|++|+|+||++.++...+..+|..+|
T Consensus 93 ~~~l~~i~~~~~a~~~--~~~~~g~~a~~~l~~~R~l~G~g~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~G~~lg 170 (490)
T PRK10642 93 TIVIMSISTFCIGLIP--SYATIGIWAPILLLLCKMAQGFSVGGEYTGASIFVAEYSPDRKRGFMGSWLDFGSIAGFVLG 170 (490)
T ss_pred HHHHHHHHHHHHHhcc--cHHHHHHHHHHHHHHHHHHHHhHhHhhHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHH
Confidence 9999999999999999 8764 88999999999999999999999999999999999999999888898888
Q ss_pred HhHHHHHh--------hccCcchhHHHHhHHHHHHHHHHHHhcCCCCCCCCCCChhhhhhhhhccccCCCCCCcchhHhh
Q 012902 189 LAFSPFLI--------HRFGWPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLIL 260 (454)
Q Consensus 189 ~~l~~~l~--------~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (454)
+.+...+. +++|||+.|++.+++.++. ++.....||+|+...+.++.++. +.+..++.++.++++++
T Consensus 171 ~~~~~~~~~~~~~~~~~~~gWR~~f~i~~~~~l~~-~~~~~~~~esp~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~ 245 (490)
T PRK10642 171 AGVVVLISTIVGEANFLDWGWRIPFFIALPLGIIG-LYLRHALEETPAFQQHVDKLEQG----DREGLQDGPKVSFKEIA 245 (490)
T ss_pred HHHHHHHHHhcCHHHhcCccHHHHHHHHHHHHHHH-HHHHHcCCCChhHHHHHHhhhhh----ccccccccccCCHHHHH
Confidence 87665443 2579999999977655543 33445567766532111100000 00000111234566666
Q ss_pred cC-cchHH-HHHHHHHHHHHHHHHHhhHHHHHHHHhCCcccchhhHhHHHHHHHHHHHHHHHHHhhhhhhcCccchhhHH
Q 012902 261 SK-PPVWA-LIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRK 338 (454)
Q Consensus 261 ~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~ 338 (454)
++ ++.+. .....++....++.+..|+|.|+++.+|++..+.++......++..++.+..|+++||+|||+....+
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~--- 322 (490)
T PRK10642 246 TKHWRSLLTCIGLVIATNVTYYMLLTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVILG--- 322 (490)
T ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHH---
Confidence 53 22222 22333445567788889999999887899988888887888888999999999999999999532211
Q ss_pred HHHHHHHHHHHHHHHHhhccChh-HHHHHHHHHHHhhhhhhcchhhhhhcccccccchhHHHHHHHHHHHHHHHHHHHHH
Q 012902 339 IMQSIGFLGPAFFLTQLSHVDSP-AMAVLCMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATG 417 (454)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g 417 (454)
.+...............++. .......+.+.+.+...........+..|++.|+++.|+.+....+++.++|.+.+
T Consensus 323 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g~~~p~i~g 399 (490)
T PRK10642 323 ---SVALFVLAIPAFILINSNVIGLIFAGLLMLAVILNCFTGVMASTLPAMFPTHIRYSALAAAFNISVLVAGLTPTLAA 399 (490)
T ss_pred ---HHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 11111111111111122222 22222222232222222222223334566789999999866667778899999999
Q ss_pred HHhccC-CchhHHHHHHHHHHHHHHHHHHh
Q 012902 418 YILQHG-SWDDVFKVSVGLYLVGTAVWNLF 446 (454)
Q Consensus 418 ~l~~~~-g~~~~~~~~~~~~~~~~~~~~~~ 446 (454)
++.+.. ++...+++..+..+++.+..++.
T Consensus 400 ~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 429 (490)
T PRK10642 400 WLVESTQNLMMPAYYLMVVAVIGLITGVTM 429 (490)
T ss_pred HHHHHhCCchHHHHHHHHHHHHHHHHHHHh
Confidence 998863 45555555555555555544444
No 23
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=100.00 E-value=4.1e-37 Score=298.40 Aligned_cols=388 Identities=14% Similarity=0.095 Sum_probs=277.0
Q ss_pred HHHHHHHHHHHHHHHhhhchhhhhcchhhhhhcCCChhhHHHHHHHHHHHHHHhhhhhhhhhccccchHHHHHHHHHHHH
Q 012902 44 QIISLCVGNFEQIFIVFGQVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSI 123 (454)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~ 123 (454)
+.+......++ ...++.....+..|.+.+++|+|.++.+++.+.+.+++.+++++.|+++||+|||+++..+.++.++
T Consensus 36 ~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~~~~~~~~~~~ 113 (476)
T PLN00028 36 RAFHLSWISFF--TCFVSTFAAAPLLPIIRDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPRYGSAFLLMLTAP 113 (476)
T ss_pred HHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHH
Confidence 34444444444 5666667788889999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhhhcccccHHHHHHHHHHHHhhcccchhhhhHHHhhhcCccchHHHHHHHHhhHHHHHHhHHhHHHHHh----h--
Q 012902 124 ATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLI----H-- 197 (454)
Q Consensus 124 ~~~l~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~ig~~l~~~l~----~-- 197 (454)
+.+++++++ +++.+++.|++.|++.+.. +....+++|++|+++|++++|+.....++|..+++.+.+.+. +
T Consensus 114 ~~~~~~~~~--s~~~l~~~r~l~G~~~~~~-~~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~ 190 (476)
T PLN00028 114 AVFCMSLVS--SATGFIAVRFFIGFSLATF-VSCQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAG 190 (476)
T ss_pred HHHHHHHhc--CHHHHHHHHHHHHHHHHhh-HHHHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 999999999 9999999999999998764 445678999999999999999998877777777766655442 2
Q ss_pred ---ccCcchhHHHHhHHHHHHHHHHHHhcCCCCCCCCCCChhhhhhhhhccccCCCCCCcchhHhhcCcchHHHHHHHHH
Q 012902 198 ---RFGWPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFC 274 (454)
Q Consensus 198 ---~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (454)
..|||+.|++.+++.++..++.++..++.|+.+ .++.+++ . +.++......+++.++++++|.+.+..++
T Consensus 191 ~~~~~gWr~~f~i~g~l~l~~~l~~~~~~~~~p~~~--~~~~~~~----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (476)
T PLN00028 191 APSFTAWRIAFFVPGLLHIIMGILVLTLGQDLPDGN--YRELKKS----G-TMPKDSFSKVLRYGVTNYRTWILALTYGY 263 (476)
T ss_pred CcchhhhHHHHHHHHHHHHHHHHHHHHHcCcCCCCc--hhhHHhc----C-ccccccHHHHHHHHHcCchhHHHHHHHHH
Confidence 258999999999988877666666554444321 0110000 0 00011111234667889999888877777
Q ss_pred HHHHHHHHHhhHHHHHHHHhCCcccchhhHhHHHHHHHHHHHHHHHHHhhhhhhcCccchhhHHHHHHHHHHHHHHHHHH
Q 012902 275 HNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQ 354 (454)
Q Consensus 275 ~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (454)
.......+..++|.|+.+.+|+++.+++.+.....++.++++++.|+++||+++|+.... +.....+.....+.....
T Consensus 264 ~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~~~r~~~~~--r~~~~~~~~~l~~i~~~~ 341 (476)
T PLN00028 264 SFGVELTMDNIIAEYFYDRFGLSLETAGAIAASFGLMNLFARPAGGYLSDVAARRFGMRG--RLWALWIVQTLGGVFCIW 341 (476)
T ss_pred HHHHHHHHHhHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhcCcch--hHHHHHHHHHHHHHHHHH
Confidence 666677788899999988889999999999999999999999999999999998743211 112222222222222222
Q ss_pred hhccChhHHHH-HHHHHHHhhhhhhcchhhhhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHH
Q 012902 355 LSHVDSPAMAV-LCMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSV 433 (454)
Q Consensus 355 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~ 433 (454)
....++..... ...+.+.+.. ...........+..|+++|++.|+.+...++|+.++|.+.+ ..+..+|+..|++.+
T Consensus 342 ~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~g~~~g~~~~~g~lg~~i~~~l~~-~~~~~~y~~~f~~~~ 419 (476)
T PLN00028 342 LGRANSLGAAIVVMILFSIFVQ-AACGATFGIVPFVSRRSLGVISGLTGAGGNVGAVLTQLLFF-TGSSYSTETGISLMG 419 (476)
T ss_pred hcccchHHHHHHHHHHHHHHHH-HhhhhhcccCcccChhhchhhhhhhhccccHHHHHHHHHHH-hcCCccHhhHHHHHH
Confidence 22222222222 2222222222 22223334445667889999999988877777777777654 223467999999999
Q ss_pred HHHHHHHHHHHHhc
Q 012902 434 GLYLVGTAVWNLFS 447 (454)
Q Consensus 434 ~~~~~~~~~~~~~~ 447 (454)
++.+++.++.++.+
T Consensus 420 ~~~~i~~~~~~~~~ 433 (476)
T PLN00028 420 VMIIACTLPVAFIH 433 (476)
T ss_pred HHHHHHHHHHHhee
Confidence 88888877776654
No 24
>PRK12307 putative sialic acid transporter; Provisional
Probab=100.00 E-value=1.9e-37 Score=298.64 Aligned_cols=380 Identities=14% Similarity=0.117 Sum_probs=271.6
Q ss_pred ccccchHHHHHHHHHHHHHHHHhhhchhhhhcchhhhhhcCCChhhHHHHHHHHHHHHHHhhhhhhhhhccccchHHHHH
Q 012902 37 LKHNSYKQIISLCVGNFEQIFIVFGQVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGF 116 (454)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~ 116 (454)
+.++.+++....+...+. .+.++.....+..|.+++++|.|+.+.+++.+++.++..+++++.|+++||+|||+++..
T Consensus 11 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l~~ 88 (426)
T PRK12307 11 EITRPQKNALFSAWLGYV--FDGFDFMLIFYIMYLIKADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKFGRKPLMMW 88 (426)
T ss_pred cCCHHHHHHHHHHHHHHH--HHHhHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHH
Confidence 333455556666666666 788999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhhhcccccHHHHHHHHHHHHhhcccchhhhhHHHhhhcCccchHHHHHHHHhhHHHHHHhHHhHHHHHh
Q 012902 117 GVVWWSIATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLI 196 (454)
Q Consensus 117 ~~~~~~~~~~l~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~ig~~l~~~l~ 196 (454)
+.++.+++.+++++++ +++.++++|+++|++.+...+....++.|++|+|+|+++.++...+.++|.++++.+.+.+.
T Consensus 89 ~~~~~~~~~~~~~~~~--~~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~l~ 166 (426)
T PRK12307 89 SIVAYSVGTGLSGLAS--GVIMLTLSRFIVGMGMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPSFA 166 (426)
T ss_pred HHHHHHHHHHHHHHHh--HHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHHHHHc
Confidence 9999999999999999 99999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccCcchhHHHHhHHHHHHHHHHHHhcCCCCCCCCCCChhhhhhhhhccccCCCCCCcchhHhhcCcchHHHHHHHH---
Q 012902 197 HRFGWPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHF--- 273 (454)
Q Consensus 197 ~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 273 (454)
+..|||+.|++.....++. +......||+++++++..+ ++ .++.+...+....++++.+|+|.++.......
T Consensus 167 ~~~~w~~~f~i~~~~~~~~-~~~~~~~p~~~~~~~~~~~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (426)
T PRK12307 167 EAYGWRAAFFVGLLPVLLV-IYIRARAPESKEWEEAKLS-GK---GKHSQSAWSVFSLSMKGLFNRAQFPLTLCVFIVLF 241 (426)
T ss_pred ccCCHHHHHHHHHHHHHHH-HHHHHHCCCChHHHHhhhh-cc---ccccccchhhhhHHHHHHHhhchHHHHHHHHHHHH
Confidence 9899999998854333222 2222222333211100000 00 00000001111235677888888765443322
Q ss_pred HHHHHHHHHHhhHHHHHHHHhCCcccchhhHhHHHHHHHHHHHHHHHHHhhhhhhcCccchhhHHHHHHHHHHHHHHHHH
Q 012902 274 CHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLT 353 (454)
Q Consensus 274 ~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (454)
......+....++|.|+++ .|.++.+.+.......++.++++++.|++.||++||+... .............
T Consensus 242 ~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~-------~~~~~~~~~~~~~ 313 (426)
T PRK12307 242 SIFGANWPIFGLLPTYLAG-EGFDTGVVSNLMTAAAFGTVLGNIVWGLCADRIGLKKTFS-------IGLLMSFLFIFPL 313 (426)
T ss_pred HHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHH-------HHHHHHHHHHHHH
Confidence 2223334467789999988 5999999999999999999999999999999999884322 1111111111111
Q ss_pred HhhccChhHHHHHHHHHHHhhh--hhhcchhhhhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHhccCCchhHHHH
Q 012902 354 QLSHVDSPAMAVLCMACSQGTD--AFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKV 431 (454)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~ 431 (454)
.....+.. .......++.+.. +..........+..|+++||++.|+.+...++++.++|.+.|.+.|..|+....++
T Consensus 314 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~~~~~gp~~~g~l~~~~g~~~~~~~ 392 (426)
T PRK12307 314 FRIPQDNY-LLLGACLFGLMATNVGVGGLVPKFLYDYFPLEVRGLGTGLIYNLAATSGTFNSMAATWLGITMGLGAALTF 392 (426)
T ss_pred HHHccccH-HHHHHHHHHHHHhcccHhHHHHHHHHHhCcHHHHhhhhhHHHHHHhHHHHHHHHHHHHHHHcccHHHHHHH
Confidence 11111222 2222222222211 11111222334556668899999999999999999999999999999887665444
Q ss_pred HHH
Q 012902 432 SVG 434 (454)
Q Consensus 432 ~~~ 434 (454)
..+
T Consensus 393 ~~~ 395 (426)
T PRK12307 393 IVA 395 (426)
T ss_pred HHH
Confidence 433
No 25
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=100.00 E-value=2.1e-37 Score=296.59 Aligned_cols=379 Identities=14% Similarity=0.121 Sum_probs=273.1
Q ss_pred cchHHHHHHHHHHHHHHHHhhhchhhhhcchhhhhhcCCChhhHHHHHHHHHHHHHHhhhhhhhhhccccchHHHHHHHH
Q 012902 40 NSYKQIISLCVGNFEQIFIVFGQVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVV 119 (454)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~ 119 (454)
+++|+.+..+.+.+. .+.++....++..|.+++++|.|+.+.+++.+.+.++..+++++.|+++||+|||+++..+.+
T Consensus 8 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~~~~~~ 85 (405)
T TIGR00891 8 RAQWNAFSAAWLGWL--LDAFDFFLVALVLAEVAGEFGLTTVDAASLISAALISRWFGALMFGLWGDRYGRRLPMVTSIV 85 (405)
T ss_pred cccHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHH
Confidence 455667777777777 899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhhhcccccHHHHHHHHHHHHhhcccchhhhhHHHhhhcCccchHHHHHHHHhhHHHHHHhHHhHHHHHhhcc
Q 012902 120 WWSIATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRF 199 (454)
Q Consensus 120 ~~~~~~~l~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~ig~~l~~~l~~~~ 199 (454)
+.+++.+++++++ +++.+++.|++.|++.+...+...+++.|++|+++|+++.++.+.+..+|..+++.+++.+.+..
T Consensus 86 ~~~~~~~~~~~~~--~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~ 163 (405)
T TIGR00891 86 LFSAGTLACGFAP--GYITMFIARLVIGIGMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVYSLVVPVW 163 (405)
T ss_pred HHHHHHHHHHHhc--cHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9999999999999 99999999999999999999999999999999999999999999999999999999999998876
Q ss_pred C--cchhHHHHhHHHHHHHHHHHHhcCCCCCCCCCCChhhh-hhhhhccccCCCCCCc-------chhHhhcC-c-chHH
Q 012902 200 G--WPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEK-KLIVSSCASKEPVKTI-------PWGLILSK-P-PVWA 267 (454)
Q Consensus 200 g--wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-------~~~~~~~~-~-~~~~ 267 (454)
+ ||+.|++.++..++. ++.....||+++++++.++++. .....+..++++..+. ..+...++ + .+..
T Consensus 164 ~~~w~~~f~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (405)
T TIGR00891 164 GDGWRALFFISILPIIFA-LWLRKNIPEAEDWKEKHAGKALVRTMVDILYGGEHRIANIVMTLAAAMVQSAGKRWPTFVY 242 (405)
T ss_pred CccHHHHHHHHHHHHHHH-HHHHHhCCCChhHHHHhhhhhhhhhHHHHHhccchhhhhhhhhhhHHhhhhhhhhhHHHHH
Confidence 6 999998866555544 3344445665432211111100 0000000000000000 00100011 1 1222
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHhCCcccchhhHhHHHHHHHHHHHHHHHHHhhhhhhcCccchhhHHHHHHHHHHH
Q 012902 268 LIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLG 347 (454)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~ 347 (454)
......+..........++|.|+++.+|+++.+.+.+.....++.++++++.+++.||+++|+..... .....
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~-------~~~~~ 315 (405)
T TIGR00891 243 LVVLVLFANLYSHPIQDLLPTYLKADLGLSPHTVANIVVFSNIGAIVGGCVFGFLGDWLGRRKAYVCS-------LLAGQ 315 (405)
T ss_pred HHHHHHHHHHHHhhhhhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchhhhHHH-------HHHHH
Confidence 33333444445556677899999988899999999999999999999999999999999998543211 11110
Q ss_pred HHHHHHHhhccChhHHHHHH-HHHHHhhhhhhcchhhhhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHhccCC-c
Q 012902 348 PAFFLTQLSHVDSPAMAVLC-MACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGS-W 425 (454)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g-~ 425 (454)
..........++.+..... .+.+.+.............+..|+++|+++.|+.+...++|..++|.+.|.+.|+.| |
T Consensus 316 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~~~g~~ 394 (405)
T TIGR00891 316 -LLIIPVFAIGANVAVLGLGLFFQQMLVQGIWGILPKHLGEYFPTDQRAAGLGFTYQLGNLGGALAPIIGALLAQRLDEY 394 (405)
T ss_pred -HHHHHHHHhCCchHHHHHHHHHHHHHHccchhhHHHHHhhhCCcchhHHHhhHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 1111111112222222222 333333333332333334455667899999999999999999999999999999977 8
Q ss_pred hhHHHH
Q 012902 426 DDVFKV 431 (454)
Q Consensus 426 ~~~~~~ 431 (454)
+..+..
T Consensus 395 ~~~~~~ 400 (405)
T TIGR00891 395 GTALAS 400 (405)
T ss_pred chhHHh
Confidence 766654
No 26
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=100.00 E-value=4.6e-37 Score=305.03 Aligned_cols=394 Identities=13% Similarity=0.100 Sum_probs=279.4
Q ss_pred chHHHHHHHHHHHHHHHHhhhchhhhhcchhhhhhcCCChhhHHHHHHHHHHHHHHhhhhhhhhhccccchHHHHHHHHH
Q 012902 41 SYKQIISLCVGNFEQIFIVFGQVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVW 120 (454)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~ 120 (454)
..|.++.++.++.+ ..+++...++.++|.+.++++++..+.+++.+++.++.+++++++|+++||+|||+++++++++
T Consensus 164 ~~~~l~~i~~l~~~--~~g~d~~~is~ilp~i~~~~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR~GRR~~lii~lil 241 (742)
T TIGR01299 164 FQWALFFVLGLALM--ADGVEVFVVGFVLPSAEKDLCIPDSGKGMLGLIVYLGMMVGAFFWGGLADKLGRKQCLLICLSV 241 (742)
T ss_pred HHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHH
Confidence 34555555555555 7888999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhhhcccccHHHHHHHHHHHHhhcccchhhhhHHHhhhcCccchHHHHHHHHhhHHHHHHhHHhHHHHHhhcc-
Q 012902 121 WSIATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRF- 199 (454)
Q Consensus 121 ~~~~~~l~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~ig~~l~~~l~~~~- 199 (454)
.+++.+++++++ +++.++++|++.|++.|+..+...++++|++|+++|++.+++...++.+|.++++.++..+...+
T Consensus 242 ~~i~~ll~afa~--s~~~llv~R~l~G~g~g~~~p~~~~~isE~~p~~~Rg~~~g~~~~~~~iG~ila~~la~~il~~~G 319 (742)
T TIGR01299 242 NGFFAFFSSFVQ--GYGFFLFCRLLSGFGIGGAIPIVFSYFAEFLAQEKRGEHLSWLCMFWMIGGIYAAAMAWAIIPHYG 319 (742)
T ss_pred HHHHHHHHHHHh--hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 999999999999 99999999999999999999999999999999999999999999999999999999887776533
Q ss_pred ------------CcchhHHHHhHHHHHHHHHHHHhcCCCCCCCCCCChhhh-hh-------------------------h
Q 012902 200 ------------GWPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEK-KL-------------------------I 241 (454)
Q Consensus 200 ------------gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-------------------------~ 241 (454)
+||+.+++.++++++. ++..+++||+|+......+.++ .. .
T Consensus 320 ~~~~~g~~~~~~gWR~l~~i~~lp~ll~-ll~~~~lPESPrwL~~~gr~~eA~~iL~~i~~~n~~~~~~~~~~~~~~~~~ 398 (742)
T TIGR01299 320 WSFQMGSAYQFHSWRVFVIVCAFPCVFA-IGALTFMPESPRFFLENGKHDEAWMILKLIHDTNMRAKGHPEKVFSVNHIK 398 (742)
T ss_pred chhccccccccccHHHHHHHHHHHHHHH-HHHHHHcCCCHHHHHHCCCHHHHHHHHHHHhcCCCCCcCchhHHHHHHHHH
Confidence 5889888877665554 4556678998864211100000 00 0
Q ss_pred hhcccc---C-CCCCC------------------cchhHhhcCc---chHHHHHHHHHHHHHHHHHHhhHHHHHHHH---
Q 012902 242 VSSCAS---K-EPVKT------------------IPWGLILSKP---PVWALIVSHFCHNWGTFILLTWMPTYYNQV--- 293 (454)
Q Consensus 242 ~~~~~~---~-~~~~~------------------~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--- 293 (454)
.....+ + +.... .+++.+++.+ +.+.+++.+++..++++++..|+|.++++.
T Consensus 399 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lf~~~~~~~tl~l~~~wf~~~~~yygl~~w~P~~~~~~~~~ 478 (742)
T TIGR01299 399 TIHQEDELIEIESDTGTWYQRCFVRALSEGGGIWGNFLRCFNPEVREITIKLMGVWFTLSFGYYGLSVWFPDMIKHLQAD 478 (742)
T ss_pred HhhhhhhhhcccccccchhhcchhhhhhhhhhHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 000000 0 00000 0233444432 345677888888999999999999876541
Q ss_pred -h-----------------CCccc--------------------------------------------------------
Q 012902 294 -L-----------------HFNLT-------------------------------------------------------- 299 (454)
Q Consensus 294 -~-----------------g~s~~-------------------------------------------------------- 299 (454)
+ +++..
T Consensus 479 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~ 558 (742)
T TIGR01299 479 DYAALTKNFPGDKVAHFSFNFTLENQIHRGGEYDNDKFIGLKFKSVSFEDSLFEECTFDDVTSSNTFFKNCTFIDTLFEN 558 (742)
T ss_pred HHHhhhccccccchhccccccchhhhhccccccccchhhcccccccccccccccccceeeccccchhhhccchhhhhccc
Confidence 0 00000
Q ss_pred -------------------------------------chhhHhHHHHHHHHHHHHHHHHHhhhhhhcCccchhhHHHHHH
Q 012902 300 -------------------------------------ESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQS 342 (454)
Q Consensus 300 -------------------------------------~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~ 342 (454)
.......+..++.+++.++.|+++||+|||+.+ .
T Consensus 559 ~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~l~~l~~i~G~il~g~L~Dr~GRr~~l---------~ 629 (742)
T TIGR01299 559 TDFEEYKFIDSEFQNCSFLHNKEGCPIDFDGDDEGAYMIYFVNFLGTLAVLPGNIVSALLMDKIGRLRML---------A 629 (742)
T ss_pred cchhhhhhhhhhhhhccccccCCccCccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHH---------H
Confidence 112335566688899999999999999999432 2
Q ss_pred HHHHHHHHHHHHhhccC-hhHHHHHHHHHHHhhhhhhcchhhhhhccc-ccccchhHHHHHHHHHHHHHHHHHHHHHHHh
Q 012902 343 IGFLGPAFFLTQLSHVD-SPAMAVLCMACSQGTDAFSQSGLYSNHQDI-APRYSGVLLGLSNTAGVLAGVFGTAATGYIL 420 (454)
Q Consensus 343 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~ 420 (454)
.+.++.++..+...... ....++..++.+++.. ...+....+..+. |++.|++++|+.+....+|.+++|.+.|.+.
T Consensus 630 ~~~~lsai~~ll~~~~~s~~~ll~~~~l~g~~~~-~~~~~~~a~~aEl~Pt~~Rgta~Gi~~~~~rlGaiigp~i~g~L~ 708 (742)
T TIGR01299 630 GSMVLSCISCFFLSFGNSESAMIALLCLFGGLSI-AAWNALDVLTVELYPSDKRATAFGFLNALCKAAAVLGILIFGSFV 708 (742)
T ss_pred HHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22222222222222222 2223333333333333 3344455555555 4578999999999999999999999999888
Q ss_pred ccCCchhHHHHHHHHHHHHHHHHHHhccCCc
Q 012902 421 QHGSWDDVFKVSVGLYLVGTAVWNLFSTGEK 451 (454)
Q Consensus 421 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 451 (454)
+. +...+|++.+++.++++++.+++ ++++
T Consensus 709 ~~-~~~~pf~i~a~~lll~~ll~~~L-PET~ 737 (742)
T TIGR01299 709 GI-TKAAPILFASAALACGGLLALKL-PDTR 737 (742)
T ss_pred Hh-hhHHHHHHHHHHHHHHHHHHHhC-CCCc
Confidence 75 45677777777777766665555 4443
No 27
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.6e-37 Score=277.39 Aligned_cols=386 Identities=17% Similarity=0.216 Sum_probs=315.0
Q ss_pred ccchHHHHHHHHHHHHHHHHhhhchhhhhcchhhhhhcCCChhhHHHHHHHHHHHHHHhhhhhhhhhccccchHHHHHHH
Q 012902 39 HNSYKQIISLCVGNFEQIFIVFGQVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGV 118 (454)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~ 118 (454)
++..++.+.+...++. .....+..++++.+.+.+|+|+|+.|.+++.++..+...+..++.|.+.||+|.|++...+.
T Consensus 9 k~~~~~~L~~S~~af~--v~F~VW~l~s~l~~~i~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drfGgR~~~~~s~ 86 (417)
T COG2223 9 KRIARRNLWLSTLAFD--VGFMVWTLFSPLGVFIKSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRFGGRKWTILSM 86 (417)
T ss_pred ccchhHHHHHHHHHHH--HHHHHHHHHHHHHhhhccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhcccCchHHHHHHH
Confidence 3445566677777777 78888899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhhhcccc-cHHHHHHHHHHHHhhcccchhhhhHHHhhhcCccchHHHHHHHHhhHHHHHHhHHhHHHHHhh
Q 012902 119 VWWSIATALTPVAAKL-GLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIH 197 (454)
Q Consensus 119 ~~~~~~~~l~~~~~~~-~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~ig~~l~~~l~~ 197 (454)
++..+..+..+++.++ ++|++++.+++.|++ |..+......+++++|||++|.++|+.. ..++|..+...++..+..
T Consensus 87 ~l~~IP~~~~~~a~~~~~~~~ll~~gll~G~~-GasFav~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~v~~ 164 (417)
T COG2223 87 LLLLIPCLGLAFAVTYPSTWQLLVIGLLLGLA-GASFAVGMPNASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPLVAV 164 (417)
T ss_pred HHHHHHHHHHHHHccCCchHHHHHHHHHHhcc-cceehcccccccccCChhhhhHHHHHhc-cccccHHHHHHHHHHHHH
Confidence 9999999999988722 445999999999999 6688999999999999999999999999 889999999999999998
Q ss_pred ccC---cchhHHHHhHHHHHHHHHHHHhcCCCCCCCCCCChhhhhhhhhccccCCCCCCcchhHhhcCcchHHHHHHHHH
Q 012902 198 RFG---WPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFC 274 (454)
Q Consensus 198 ~~g---wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (454)
..| ||..-.+..+..++..+..++...|.|+++...++.. ...++.++++++.|.+++.++.
T Consensus 165 ~~g~~~w~~~~~i~~~~l~v~~v~~~~~~~d~p~~r~~~~~~~---------------~~~~~~v~~~~~~W~lsllY~~ 229 (417)
T COG2223 165 AFGFLAWRNVAGIYVVALAIAAVLAWLGMNDVPEHRASVKPQL---------------PAQLKAVFSNKDTWLLSLLYFA 229 (417)
T ss_pred HHhhHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhccccccc---------------hhHHHHHhcCcchHHHHHHHHH
Confidence 888 9999999888888888888888888776432222111 1345668899999999999999
Q ss_pred HHHHHHHHHhhHHHHHHHHhCCcccchhhHhHHHHHHHHHHHHHHHHHhhhhhhcCccchhhHHHHHHHHHHHHHHHHHH
Q 012902 275 HNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQ 354 (454)
Q Consensus 275 ~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (454)
...++.++..++|.|+++++|.++.++|.......+.+.+.++.+|+++||+|.+|... ........+.....
T Consensus 230 tFG~Fvgfs~~l~~~~~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg~rv~~-------~~f~~~~~~~~~l~ 302 (417)
T COG2223 230 TFGGFVGFSAYLPMYLVTQFGLSPVTAGLIAFLFPLIGALARPLGGWLSDRIGGRRVTL-------AVFVGMALAAALLS 302 (417)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhccchhhhhccchhHHH-------HHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999995432 22222222222222
Q ss_pred hhc-----cChhHHHHHHHHHHHhhhhhhcchhhhhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHhccCC-chhH
Q 012902 355 LSH-----VDSPAMAVLCMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGS-WDDV 428 (454)
Q Consensus 355 ~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g-~~~~ 428 (454)
... ..+.......++..+...+..............|++.|.+.|+....+.+|++.-|...|...|..| +...
T Consensus 303 ~~~~~~~~~~~~~~~~~~~l~l~~~~G~GnGsvfk~Ip~if~~~~G~v~G~vga~G~lGGf~lp~~~g~~~~~tg~~~~~ 382 (417)
T COG2223 303 LFLTGFGHGGSFVVFVAVFLALFVFAGLGNGSVFKMIPVIFPKETGAVTGIVGAIGGLGGFFLPLAFGVSLDLTGSYTGA 382 (417)
T ss_pred ccccccccCcchHHHHHHHHHHHHHhccCcchheeechHHHHhhhhHHHHHHHHhccccccchhHHHHHHHHhcccHHHH
Confidence 111 1233344443444444444555555555666777899999999999999999999999999999855 8999
Q ss_pred HHHHHHHHHHHHHHHHHhccCC
Q 012902 429 FKVSVGLYLVGTAVWNLFSTGE 450 (454)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~~~~~ 450 (454)
|++.....+++.+.......++
T Consensus 383 f~~~~~~~~~a~v~~~~~y~r~ 404 (417)
T COG2223 383 FMLLLAFYLVALVLTWALYARR 404 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHhc
Confidence 9999999998888766665444
No 28
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=100.00 E-value=2.4e-36 Score=283.58 Aligned_cols=377 Identities=14% Similarity=0.100 Sum_probs=276.7
Q ss_pred hHHHHHHHHHHHHHHHHhhhchhhhhcchhhhh-hcCCChhhHHHHHHHHHHHHHHhhhhhhhhhccccchHHHHHHHHH
Q 012902 42 YKQIISLCVGNFEQIFIVFGQVNMSIAILPMSA-EFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVW 120 (454)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~ 120 (454)
.++.+.+..+++. .....+..++++.+.+.+ |+|+|.+|.+++.+++.+++.++.++.|++.||+|.|+++..+.++
T Consensus 32 a~r~l~~s~~~f~--~~F~~w~~~~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~~~~~ll 109 (462)
T PRK15034 32 ARRNLWISVSCLL--LAFCVWMLFSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRRWTVFSTAI 109 (462)
T ss_pred HHHHHHHHHHHHH--HHHHHHHHHHHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHH
Confidence 3467777777788 888899999999999866 8999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhhhc-----ccccHHHHHHHHHHHHhhcccchhhhhHHHhhhcCccchHHHHHHHHhhHHHHHHhHHhHHHHH
Q 012902 121 WSIATALTPVA-----AKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFL 195 (454)
Q Consensus 121 ~~~~~~l~~~~-----~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~ig~~l~~~l 195 (454)
.++.+++.+++ + +++.+++.|++.|++ +..++.....+++|+|+|+||+++|+.....++|..+++++...+
T Consensus 110 ~~i~~~~~~~a~~~~~~--s~~~lli~r~l~Gig-g~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l~p~~ 186 (462)
T PRK15034 110 LIIPCVWLGIAVQNPNT--PFGIFIVIALLCGFA-GANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQLVAPLV 186 (462)
T ss_pred HHHHHHHHHHHHcccCC--CHHHHHHHHHHHHHH-HHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 99999999987 7 899999999999998 778899999999999999999999999777777777666555443
Q ss_pred h-----h-------------ccCcchhHHHHhHHHHHHHHHHHHhcCCCCCCCCCCChhhhhhhhhccccCCCCCCcchh
Q 012902 196 I-----H-------------RFGWPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWG 257 (454)
Q Consensus 196 ~-----~-------------~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (454)
. + ..+||.++++..++.++..++.++..++.++++ .+ ..+.+
T Consensus 187 i~~~l~~~~G~~~~~~~~g~~~~~~~~~~~~~~~~iv~~i~~~~~~~~~~~~~--~~------------------~~~~~ 246 (462)
T PRK15034 187 IFVPVFAFLGVNGVPQADGSVMSLANAAWIWVPLLAIATIAAWSGMNDIASSR--AS------------------IADQL 246 (462)
T ss_pred HHHHHHHHhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCccccc--cC------------------HHHHH
Confidence 2 2 234777777877777777666666554433211 11 12344
Q ss_pred HhhcCcchHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCcccchhhHhHHHHHHHHHHHHHHHHHhhhhhhcCccchhhH
Q 012902 258 LILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVR 337 (454)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~ 337 (454)
+.+|+|+.|.+++.+++.+..+.++..++|.|+++.+ +............+...+.++++|+++||+|+++......
T Consensus 247 ~vlk~~~~Wllslly~~tFG~fvg~s~~lp~~~~~~~--~~~~~l~~~~l~~l~~~l~rplgG~LADRiG~~~vl~~~~- 323 (462)
T PRK15034 247 PVLQRLHLWLLSLLYLATFGSFIGFSAGFAMLAKTQF--PDVNILRLAFFGPFIGAIARSVGGAISDKFGGVRVTLINF- 323 (462)
T ss_pred HHhCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHc--ChHHHHHHHHHHHHHHHHHHHhhHHHHHhcCchHHHHHHH-
Confidence 5899999999999999999999999999999998854 3333333344456778889999999999999995433211
Q ss_pred HHHHHHHHHHHH-HHHHHhhcc--ChhHHHHHHHHHHHhhhhhhcchhh-hhhccccc---------------------c
Q 012902 338 KIMQSIGFLGPA-FFLTQLSHV--DSPAMAVLCMACSQGTDAFSQSGLY-SNHQDIAP---------------------R 392 (454)
Q Consensus 338 ~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~---------------------~ 392 (454)
+.+.... ......... .+.......++..+...+....... .+....++ +
T Consensus 324 -----i~~~i~~~~~~l~lp~~~~~~~~~~~~~~~~l~~~~G~gngsvfk~ip~~f~~~~~~~~~~~~~~~~~~~~~~~~ 398 (462)
T PRK15034 324 -----IFMAIFSALLFLTLPGTGSGNFIAFYAVFMGLFLTAGLGSGSTFQMIAVIFRQITIYRVKMKGGSDEQAQREAVT 398 (462)
T ss_pred -----HHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHhcccchHHHHhhHHHHhhhhhhcccccccchhHHhhHHHH
Confidence 1111111 111111111 1222222222222222222222222 22222221 2
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHhcc-CCchhHHHHHHHHHHHHHHHHHHhccCCc
Q 012902 393 YSGVLLGLSNTAGVLAGVFGTAATGYILQH-GSWDDVFKVSVGLYLVGTAVWNLFSTGEK 451 (454)
Q Consensus 393 ~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 451 (454)
+.|.+.|+....+.+|+++-|.+.|...+. +++...|+...+..+++.++.+....++.
T Consensus 399 ~~g~v~G~v~a~G~~Ggf~~p~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~w~~y~r~~ 458 (462)
T PRK15034 399 ETAAALGFISAIGAVGGFFIPQAFGMSLNMTGSPVGAMKVFLIFYIVCVLLTWLVYGRRK 458 (462)
T ss_pred HHHHHHHHHHHHHHcccchhhHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHhccCC
Confidence 578999999999999999999999999887 77999999999999988887776655443
No 29
>PRK09952 shikimate transporter; Provisional
Probab=100.00 E-value=2.2e-36 Score=290.79 Aligned_cols=387 Identities=17% Similarity=0.160 Sum_probs=264.5
Q ss_pred chHHHHHHHHHHHHHHHHhhhchhhhhcchh-hhhhc--CCChhhHHHHH-----HHHHHHHHHhhhhhhhhhccccchH
Q 012902 41 SYKQIISLCVGNFEQIFIVFGQVNMSIAILP-MSAEF--NWNPATVGLIQ-----SSFFWGYLLTQIAGGIWADTVGGKA 112 (454)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-i~~~~--~~s~~~~g~~~-----s~~~~~~~~~~~~~g~l~dr~Grr~ 112 (454)
++++.....+++.. ++.+|...++...|. +.+++ +.++. .+++. ++..++..+++++.|+++||+|||+
T Consensus 19 ~~~~~~~~~~~~~~--~~~~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~G~l~Dr~Grr~ 95 (438)
T PRK09952 19 RARRAALGSFAGAV--VDWYDFLLYGITAALVFNREFFPQVSPA-MGTLAAFATFGVGFLFRPLGGVVFGHFGDRLGRKR 95 (438)
T ss_pred HHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHhcCCCCCcH-HHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhccHH
Confidence 33456666666777 799999999988775 55555 66665 46554 3455667799999999999999999
Q ss_pred HHHHHHHHHHHHHhhhhhcccccHH--------HHHHHHHHHHhhcccchhhhhHHHhhhcCccchHHHHHHHHhhHHHH
Q 012902 113 VLGFGVVWWSIATALTPVAAKLGLP--------FLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLG 184 (454)
Q Consensus 113 ~~~~~~~~~~~~~~l~~~~~~~~~~--------~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g 184 (454)
++..+.++++++++++++++ |++ .++++|+++|++.|..++....++.|++|+|+|++..+..+.+..+|
T Consensus 96 ~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~g~~~G 173 (438)
T PRK09952 96 MLMLTVWMMGIATALIGLLP--SFSTIGWWAPVLLVTLRAIQGFAVGGEWGGAALLAVESAPKNKKAFYSSGVQVGYGVG 173 (438)
T ss_pred HHHHHHHHHHHHHHHHhcCC--cHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHH
Confidence 99999999999999999999 876 58889999999999999999999999999999999999999999999
Q ss_pred HHhHHhHHHHHhh--------ccCcchhHHHHhHHHHHHHHHHHHhcCCCCCCCCCCChhhhhhhhhccccCCCCCCcch
Q 012902 185 SVTGLAFSPFLIH--------RFGWPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPW 256 (454)
Q Consensus 185 ~~ig~~l~~~l~~--------~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (454)
..++..+...+.+ .+|||++|++.+++.++. .......||+|+..++.. + .++.+++ ....
T Consensus 174 ~~l~~~~~~~l~~~~~~~~~~~~gWr~~f~~~~~~~l~~-~~l~~~~~es~~~~~~~~--~------~~~~~~~--~~~~ 242 (438)
T PRK09952 174 LLLSTGLVSLISMMTTDEQFLSWGWRIPFLFSIVLVLIA-LWVRNGMEESAEFEQQQH--E------QAAAKKR--IPVI 242 (438)
T ss_pred HHHHHHHHHHHHHhCCHHHhhccChHHHHHHHHHHHHHH-HHHHHhCCCChhHHHHHh--h------ccccccc--CCHH
Confidence 9999887776653 579999999887765443 222333455443211100 0 0000000 1122
Q ss_pred hHhhcCcchHHHHH-HHHHHHHHHHHHHhhHHHHHHHHhCCcccchhhHhHHHHHHHHHHHHHHHHHhhhhhhcCccchh
Q 012902 257 GLILSKPPVWALIV-SHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTT 335 (454)
Q Consensus 257 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~ 335 (454)
+.++|+|+.+.... ..++.....+....|.|.|+++.+|++...........++...++.++.|+++||++||+....+
T Consensus 243 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~~~~~ 322 (438)
T PRK09952 243 EALLRHPGAFLKIIALRLCELLTMYIVTAFALNYSTQNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADRFGRRRVYITG 322 (438)
T ss_pred HHHHHchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHH
Confidence 34667777666544 45555667778888999999888898887665556666777788889999999999998532211
Q ss_pred hHHHHHHHHHHHHHHHHHHhhccChhHHHHHHHHHHHhhhhhhcchhhhhh-cccccccchhHHHHHHHHH-HHHHHHHH
Q 012902 336 VRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLCMACSQGTDAFSQSGLYSNH-QDIAPRYSGVLLGLSNTAG-VLAGVFGT 413 (454)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~-~~g~~~~~ 413 (454)
.....+............+.........++.........+...... +..|++.|+++.|+.+... .+++.++|
T Consensus 323 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p 397 (438)
T PRK09952 323 -----ALIGTLSAFPFFMALEAQSIFWIVFFSIMLANIAHDMVVCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTP 397 (438)
T ss_pred -----HHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCcchhHHHHhHHHHHHHHHHHHHHH
Confidence 0111111111111111222222222222322222222233333444 4455678999999966554 58999999
Q ss_pred HHHHHHhcc--CCchhHHHHHHHHHHHHHHHHHHhcc
Q 012902 414 AATGYILQH--GSWDDVFKVSVGLYLVGTAVWNLFST 448 (454)
Q Consensus 414 ~~~g~l~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~ 448 (454)
.+.+++.|. .+|...+.+.+++.+++.+..+..++
T Consensus 398 ~i~g~l~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~ 434 (438)
T PRK09952 398 FIAAALVTYFGGSWHSVAIYLLAGCLISAMTALLMKD 434 (438)
T ss_pred HHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHccc
Confidence 999999885 35888888888888877777665543
No 30
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=100.00 E-value=9.9e-38 Score=296.04 Aligned_cols=367 Identities=16% Similarity=0.188 Sum_probs=278.3
Q ss_pred HHhhhchhhhhcchhhhhhcCCChhhHHHHHHHHHHHHHHhhhhhhhhhccccchHHHHHHHHHHHHHHhhhhhcccccH
Q 012902 57 FIVFGQVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGL 136 (454)
Q Consensus 57 ~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~l~~~~~~~~~ 136 (454)
...+++..+++..|.+.+++|.|..+.+++.+++.++..+++++.|+++||+|||+++..+.++.+++.+++++++ ++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~--~~ 83 (379)
T TIGR00881 6 AYYLVRKNFALAMPYLVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFFGFST--SL 83 (379)
T ss_pred HHHHhHHhhhhhhHHHHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHHHHHHhh--hH
Confidence 5677888899999999999999999999999999999999999999999999999999999999999999999999 99
Q ss_pred HHHHHHHHHHHhhcccchhhhhHHHhhhcCccchHHHHHHHHhhHHHHHHhHH-hHHHHHhhccCcchhHHHHhHHHHHH
Q 012902 137 PFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGL-AFSPFLIHRFGWPSVFYSFGSLGTVW 215 (454)
Q Consensus 137 ~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~ig~-~l~~~l~~~~gwr~~f~~~~~~~~~~ 215 (454)
+.+++.|++.|++.+...+...+++.|++|+|+|++++++.+.+..+|..+++ .+++.+.+..+||+.|++.+.+.++.
T Consensus 84 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (379)
T TIGR00881 84 WVMAALWALNGIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAELYSWHWVFIVPGIIAIIV 163 (379)
T ss_pred HHHHHHHHHHHhhccccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999 57777778889999999988888777
Q ss_pred HHHHHHhcCCCCCCCCCCChhhhhh-h-hh--c-cccCCCCCCcchhHhhcCcchHHHHHHHHHHHHHHHHHHhhHHHHH
Q 012902 216 FTVWLSKAHSSPAEDPQLRPAEKKL-I-VS--S-CASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYY 290 (454)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 290 (454)
.++.+...+|++++++..+.++.+. . ++ + .+++.+..+...+..+|+|.++...+..++..........+.|.|+
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (379)
T TIGR00881 164 SLICFLLLRDSPQSCGLPPAEEMPNEEPDGDAEKKEEELTKKQIFLQYVLLNKVLWYISLGYVFVYVVRTGILDWSPLYL 243 (379)
T ss_pred HHHHheeeCCCccccccCccccCcccccccccccccccccchHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6666666776654322111111000 0 00 0 0011111123456678899999988888888888889999999999
Q ss_pred HHHhCCcccchhhHhHHHHHHHHHHHHHHHHHhhhhhhcCccchhhHHHHHHHHHHHHHHHHHHhhccChh-HHHHHHHH
Q 012902 291 NQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSP-AMAVLCMA 369 (454)
Q Consensus 291 ~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 369 (454)
++.+|+++.+.+.......++.++++++.+++.||..+++.... .....................+. ........
T Consensus 244 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (379)
T TIGR00881 244 TQEKGFSKEKASWAFTLYELGGLVGTLLAGWLSDKLFNGRRGPL----AVFFMALIIVSLLVYWLNPAANPLMDLICLFA 319 (379)
T ss_pred HHHhCCCHHHHHHHHHHHHHHcchhHHHHHHHHHHHcCCcchHH----HHHHHHHHHHHHHHHhcCcchhHHHHHHHHHH
Confidence 99889999999999999999999999999999998754432111 11111111111111111111222 22222233
Q ss_pred HHHhhhhhhcchhhhhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHhccCCchhHH
Q 012902 370 CSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVF 429 (454)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~ 429 (454)
.+...............+..|+++|+++.|+.+...++|+.++|.+.|.+.|+.||+..|
T Consensus 320 ~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~f 379 (379)
T TIGR00881 320 LGFLVYGPQMLIGVIASELAPKKAAGTAAGFVGFFAYLGGILAGLPLGYLADGFGWAGAF 379 (379)
T ss_pred HHHHHhhhhHHHHHHHHHhcCcchhHHHHHHHHHhhhhhhhhhhhhHHHHHHhhcccccC
Confidence 332222222222233445566789999999999999999999999999999998887653
No 31
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=100.00 E-value=3.8e-36 Score=286.57 Aligned_cols=361 Identities=14% Similarity=0.117 Sum_probs=267.4
Q ss_pred hhhcchhhhhhcCCChhhHHHHHHHHHHHHHHhhhhhhhhhccccchHHHHHHHHHHHHHHhhhh---h-cccccHHHHH
Q 012902 65 MSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTP---V-AAKLGLPFLL 140 (454)
Q Consensus 65 ~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~l~~---~-~~~~~~~~l~ 140 (454)
....++++.+|+|.|+++.|++.+.+.++..+++++.|++.||+|||+++..+.++.+++.+++. + .+ +++.++
T Consensus 32 ~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~l~~~~~~~~~~~~~~~~~~~~~~--~~~~l~ 109 (402)
T TIGR00897 32 EQGWLSPFLKALGLSPQQSASAFTLYGIAAAISAWISGVVAEIIGPLKTMMIGLLLWCVGHAAFIVFGLGHA--NYPLIL 109 (402)
T ss_pred HHHhHHHHHHHhCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCc--cHHHHH
Confidence 33455667788999999999999999999999999999999999999999999999998877653 3 34 788889
Q ss_pred HHHHHHHhhcccchhhhhHHHhhhcCccchHHHHHHHHhhHHHHH-HhHHhHHHHHhhccCcchhHHHHhHHHHHHHHHH
Q 012902 141 VVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGS-VTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVW 219 (454)
Q Consensus 141 ~~r~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~-~ig~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~ 219 (454)
+.|+++|++.+...+...+.+.|++|+|+|++++|+.+.+.++|. .++|.+++.+.+.+||+..++......++..++.
T Consensus 110 ~~~~i~G~g~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~ 189 (402)
T TIGR00897 110 LFYGIRGLGYPLFAYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYYSSYAIPAFGEMNTLWSALAFVLTGGVIA 189 (402)
T ss_pred HHHHHHHcchHHHHhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHH
Confidence 999999999888888888889999999999999999999999997 6899999999988897766665544434333344
Q ss_pred HHhcCCCCCCCCCCChhhhhhhhhccccCCCCCCcchhHhhcCcchHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCccc
Q 012902 220 LSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLT 299 (454)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~ 299 (454)
.+..++.++++++.++++ ..+....++.++|+|+++...+..++.....++..++.|.|+++ +|+++.
T Consensus 190 ~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~ 257 (402)
T TIGR00897 190 LFSNKDIFTPQHMQTREK-----------FSELGKAATILFTNPNVLLGGMVRIINTIGLFGFAVFLPMFVAE-LGFSTS 257 (402)
T ss_pred HhccCCCCCcccccCCcc-----------hhhHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCChh
Confidence 444444322111100000 00012245668899999988888888888888899999999977 799999
Q ss_pred chhhHhHHHHHHHHHHHHHHHHHhhhhhhcCccchhhHHHHHHHHHHHHHHHHHHhh--ccChhH-HHHHHHHHHHhhhh
Q 012902 300 ESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLS--HVDSPA-MAVLCMACSQGTDA 376 (454)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-~~~~~~~~~~~~~~ 376 (454)
+.+.......++..++++..|+++||+++|+... ....+........+.... ..++.+ ......+.+.+...
T Consensus 258 ~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~-----~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~G~~~~~ 332 (402)
T TIGR00897 258 EWLQIWGTFFFTNIVFNVIFGIVGDKLGWMNTVR-----WFGGVGCGIFTLALYYIPQHFGHSFAVALIIAIALGIFLAG 332 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHH-----HHHHHHHHHHHHHHHHHHHccCCcHHHHHHHHHHHHHHHHH
Confidence 9999889999999999999999999999885321 011111111111111111 122222 23333344443333
Q ss_pred hhcchhhhhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHHHHh
Q 012902 377 FSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWNLF 446 (454)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 446 (454)
. .+. .....+.+|++|+++.|+.+...++++.++|.+.|.+.|..|+...+++.+++.+++.+...+.
T Consensus 333 ~-~~~-~~~~~~~~~~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~g~~~~~~~~a~~~~i~~~~~~~~ 400 (402)
T TIGR00897 333 Y-VPL-AAVFPTLAPKHKGAAMSVLNLSAGLSAFLAPAIAVLFIGFFGAIGVVWIFAALYVVSAFLTAFI 400 (402)
T ss_pred H-HHH-HHHHHhhCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHh
Confidence 2 232 3334567788999999999999999999999999999999999999999998888877766554
No 32
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=100.00 E-value=5.9e-36 Score=285.38 Aligned_cols=367 Identities=11% Similarity=0.021 Sum_probs=271.9
Q ss_pred HHHHHHHhhhchhhhhcchhhhhhcCCChhhHHHHHHHHHHHHHHhhhhhhhhhccccchHHHHHHHHHHHHHHhhhhhc
Q 012902 52 NFEQIFIVFGQVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVA 131 (454)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~l~~~~ 131 (454)
.+..+...++.....+.+|.+.++++.+.++.++..+++.+++.++++++|+++||+|||+++..+.++++++.++++++
T Consensus 22 ~~~~~~~~~~~~~~~p~l~~i~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~a 101 (413)
T PRK15403 22 ILYDFAAYLTTDLIQPGIINVVRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTLACAATLFT 101 (413)
T ss_pred HHHHHHHHHHHHhhccCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHHHHHHHHHHHc
Confidence 33334677788889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccHHHHHHHHHHHHhhcccchhhhhHHHhhhcCccchHHHHHHHHhhHHHHHHhHHhHHHHHhhccCcchhHHHHhHH
Q 012902 132 AKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSL 211 (454)
Q Consensus 132 ~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~ig~~l~~~l~~~~gwr~~f~~~~~~ 211 (454)
+ |++.++++|+++|++.+...+....++.|++|+++|++++++......+|..+||.+++.+.++.|||+.|++.+++
T Consensus 102 ~--~~~~l~~~r~l~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~gw~~~f~~~~~~ 179 (413)
T PRK15403 102 T--SMTQFLIARFIQGTSICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHFVHWKVLFAIIAVM 179 (413)
T ss_pred C--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 9 99999999999999988777777888999999999999999999999999999999999999989999999999988
Q ss_pred HHHHHHHHHHhcCCCCCCCCCCChhhhhhhhhccccCCCCCCcchhHhhcCcchHHHHHHHHHHHHHHHHHHhhHHHHHH
Q 012902 212 GTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYN 291 (454)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 291 (454)
.++..+..++..||+++++++..+.+. ...+++.++|||.++...+..++.....+.+..+.|.+++
T Consensus 180 ~~i~~~~~~~~lp~~~~~~~~~~~~~~-------------~~~~~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~~P~~l~ 246 (413)
T PRK15403 180 GLIAFVGLLLAMPETVKRGAVPFSAKS-------------VLRDFRNVFRNRLFLTGAATLSLSYIPMMSWVAVSPVILI 246 (413)
T ss_pred HHHHHHHHHHhCCCCccccCCCCChHH-------------HHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHhChHHHH
Confidence 887766656666775432211100000 0235667899999999888888888888888888999999
Q ss_pred HHhCCcccchhhHhHHHHHHHHHHHHHHHHHhhhhhhcCccchhhHHHHHHHHHHHHHHHHHHhhccChhHH-HHHHHHH
Q 012902 292 QVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAM-AVLCMAC 370 (454)
Q Consensus 292 ~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 370 (454)
+.+|+++.+.++.......+..++..+.+++.+|..+++..... .....++......... ...+..+. .....+.
T Consensus 247 ~~~g~s~~~~gl~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~--~~~~~ig~~l~~~~~~--~~~~~~~~~~~~~~l~ 322 (413)
T PRK15403 247 DAGGMTTSQFAWTQVPVFGAVIVANAIVARFVKDPTEPRFIWRA--VPIQLVGLALLIVGNL--LWPHVWLWSVLGTSLY 322 (413)
T ss_pred HhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHH--HHHHHHHHHHHHHHHH--HccccHHHHHHHHHHH
Confidence 98899999999988888888888888777766544433221110 0111112111111111 11222222 2222233
Q ss_pred HHhhhhhhcchhhhhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHHH
Q 012902 371 SQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVG 439 (454)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~ 439 (454)
+.+.+ ...+........-.+..+|++.++.+.....+..+++...|++.++ +-...|...+++..+.
T Consensus 323 ~~G~~-~~~p~~~~~al~~~~~~~G~a~a~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~ 389 (413)
T PRK15403 323 AFGIG-LIFPTLFRFTLFSNNLPKGTVSASLNMVILMVMAVSVEIGRWLWFN-GGRLPFHLLAVVAGVI 389 (413)
T ss_pred HHHHH-HHhHHHHHHHhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCchHHHHHHHHHHHH
Confidence 33333 3333333222222233589999999999999999999999999887 4455555544444433
No 33
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=100.00 E-value=7.2e-36 Score=284.01 Aligned_cols=345 Identities=16% Similarity=0.202 Sum_probs=266.4
Q ss_pred HHhhhchhhhhcchhhhhhcCCChhhHHHHHHHHHHHHHHhhhhhhhhhccccchHHHHHHHHHHHHHHhhhhhcccccH
Q 012902 57 FIVFGQVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGL 136 (454)
Q Consensus 57 ~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~l~~~~~~~~~ 136 (454)
....+.....+..|.+.+++|.|+++.+++.+.+.++..+++++.|+++||+|||+++..+.++.+++.+++++++ ++
T Consensus 16 ~~~~~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~--~~ 93 (385)
T TIGR00710 16 LGPLGIDMYLPAFPEIAADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALSSLGLALSN--NI 93 (385)
T ss_pred HHHHHHHHhcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHHc--cH
Confidence 4567777888899999999999999999999999999999999999999999999999999999999999999999 99
Q ss_pred HHHHHHHHHHHhhcccchhhhhHHHhhhcCccchHHHHHHHHhhHHHHHHhHHhHHHHHhhccCcchhHHHHhHHHHHHH
Q 012902 137 PFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWF 216 (454)
Q Consensus 137 ~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~ig~~l~~~l~~~~gwr~~f~~~~~~~~~~~ 216 (454)
+.+++.|++.|++.+...+...+++.|++|+|+|++++++.+....+|..+++.+++.+.++.+||+.|++.++..++..
T Consensus 94 ~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 173 (385)
T TIGR00710 94 ETLLVLRFVQAFGASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVWLSWHAIFAFLSLAGILLS 173 (385)
T ss_pred HHHHHHHHHHHcchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999888887776
Q ss_pred HHHHHhcCCCCCCCCCCChhhhhhhhhccccCCCCCCcchhHhhcCcchHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCC
Q 012902 217 TVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHF 296 (454)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~ 296 (454)
+..++..||+++++++.+.++. ..++++.+|+|+++...+...+..........+.|.++++.+|.
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 239 (385)
T TIGR00710 174 ALIFFILPETLPYEARIQISTY--------------FETFLLLLKSKMFWGYALIYGASFGGFFAFFSGAPFVYIDIMGV 239 (385)
T ss_pred HHHHHhCCCCCCCcccCCHHHH--------------HHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHcChHHHHHHcCC
Confidence 6666666665443222111110 23456678899998888777777777778888889999988899
Q ss_pred cccchhhHhHHHHHHHHHHHHHHHHHhhhhhhcCccchhhHHHHHHHHHHHHHHHHH-Hhh-cc-ChhHHHHH-HHHHHH
Q 012902 297 NLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLT-QLS-HV-DSPAMAVL-CMACSQ 372 (454)
Q Consensus 297 s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~-~~~~~~~~-~~~~~~ 372 (454)
++.+.+.......++.++++++.+++.||+++|+... ............. ... .. +....... ..+.+.
T Consensus 240 ~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 312 (385)
T TIGR00710 240 SPSVFGLLFALNIIAMIFGGFLNGRFIKKWGAKSLLR-------MGLILFAVSAVLLEITAILGLGSWAMIIGPMMFVGI 312 (385)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHH-------HHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999885322 1111111111111 111 11 12222222 222333
Q ss_pred hhhhhhcchhhhhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHhccCCc
Q 012902 373 GTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSW 425 (454)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~ 425 (454)
+... ..+.......+..|++++++.++.+...+.++.+.+.+.+.+.+..++
T Consensus 313 ~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~ 364 (385)
T TIGR00710 313 GNSM-ISSIAMAYALEDFPHVAGTASALFGTLRLVLGAIVGYLVSLIHGNTAW 364 (385)
T ss_pred HHHH-HHHHHHHHHhccCcccchHHHHHHHHHHHHHHHHHHHHHHhccccChH
Confidence 3333 333333444444567899999999999888777777777754443333
No 34
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=100.00 E-value=1.1e-36 Score=298.43 Aligned_cols=362 Identities=17% Similarity=0.200 Sum_probs=284.8
Q ss_pred HHHHHHHHHHHHhhhchhhhhcchhhhhhcCCChhhHHHHHHHHHHHHHHhhhhhhhhhccccchHHHHHHHHHHHHHHh
Q 012902 47 SLCVGNFEQIFIVFGQVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATA 126 (454)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~ 126 (454)
..+..+.+ ...++....++.+|.+.+++|.+..+.+++.+.+.++..++.++.|+++||+|||+++..+.++.+++.+
T Consensus 5 ~~~~~~~~--~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~ 82 (485)
T TIGR00711 5 IVLMLGTF--MAVLDSTIVNVAIPTIAGDLGSSLSQVQWVITSYMLANAISIPLTGWLAKRFGTRRLFLISTFAFTLGSL 82 (485)
T ss_pred HHHHHHHH--HHHHHHHHHHHHHHHHHHhcCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHHHHHHHH
Confidence 34444444 6888999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhcccccHHHHHHHHHHHHhhcccchhhhhHHHhhhcCccchHHHHHHHHhhHHHHHHhHHhHHHHHhhccCcchhHH
Q 012902 127 LTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFY 206 (454)
Q Consensus 127 l~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~ig~~l~~~l~~~~gwr~~f~ 206 (454)
++++++ |++.++++|+++|++.+...+...+++.|++|+|+|+++++++.....+|..+||.+++.+.+++|||+.|+
T Consensus 83 ~~~~~~--~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~w~~~f~ 160 (485)
T TIGR00711 83 LCGVAP--NLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIENYHWRWIFL 160 (485)
T ss_pred HHhCcC--CHHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhccCcCceehhh
Confidence 999999 999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhHHHHHHHHHHHHhcCCCCCCCCCCChhhh----------------hhh-------------------------hhcc
Q 012902 207 SFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEK----------------KLI-------------------------VSSC 245 (454)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~~~-------------------------~~~~ 245 (454)
+.+.++++..++..+..||+++++.+..+... +.. ..+.
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (485)
T TIGR00711 161 INVPIGIIVVVVAFFILPRDKPAASENFDFLGLLLLSVGLGSLLYGLSEGPERGWFDSNEILILSITGLVAIIAFVVWEL 240 (485)
T ss_pred hhhHHHHHHHHHHHHHcCCccccccCCCcHHHHHHHHHHHHHHHHHHhhCCCCCCCCchHHHHHHHHHHHHHHHHHHHHH
Confidence 99888887777666666664433221111000 000 0001
Q ss_pred ccCCCCCCcchhHhhcCcchHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCcccchhhHhHHHHHHHHHHHHHHHHHhhh
Q 012902 246 ASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADT 325 (454)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr 325 (454)
++++ +..+ .+.+|+|+++...+..++..+..+....++|.|+++.+|+++.+++.......++.+++.++.|++.||
T Consensus 241 ~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r 317 (485)
T TIGR00711 241 TDDN--PLVD-LRLFKYRNFTIGCVYMSLLGLGLYGSFYLLPLYLQQVLGYTALQAGLHILPVGLAPMLSSPIAGRMGDK 317 (485)
T ss_pred cCCC--CccC-HHHHcCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 1111 1122 347889999998888888888888899999999999899999999999999999999999999999999
Q ss_pred hhhcCccchhhHHHHHHHHHHHHHHHHHH--hhccChh-HHHHHHHHHHHhhhhhhcchhhhhhcccccccchhHHHHHH
Q 012902 326 LVSKGLSVTTVRKIMQSIGFLGPAFFLTQ--LSHVDSP-AMAVLCMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSN 402 (454)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 402 (454)
+++|+. ..........+..... .....+. .......+.+.+.+....+......+..++++++++.|+.+
T Consensus 318 ~~~~~~-------~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 390 (485)
T TIGR00711 318 IDPRKL-------VTIGLILYAVGFYWRAFTFTPDTPFLAIALPQFIRGFGMGCFFMPLTTIALSGLPPHKIARGSSLSN 390 (485)
T ss_pred cCcHHH-------HHHHHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHhHHHHHHH
Confidence 998842 2222222222222221 1112222 23333444455544444455555567778899999999999
Q ss_pred HHHHHHHHHHHHHHHHHhcc
Q 012902 403 TAGVLAGVFGTAATGYILQH 422 (454)
Q Consensus 403 ~~~~~g~~~~~~~~g~l~~~ 422 (454)
..+++|+.+|+.+.|.+.++
T Consensus 391 ~~~~~g~~ig~~i~g~~~~~ 410 (485)
T TIGR00711 391 FTRQLGGSIGTALITTILTN 410 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999874
No 35
>PRK10504 putative transporter; Provisional
Probab=100.00 E-value=9.2e-36 Score=290.45 Aligned_cols=366 Identities=14% Similarity=0.112 Sum_probs=278.7
Q ss_pred HHHHHHHHHHhhhchhhhhcchhhhhhcCCChhhHHHHHHHHHHHHHHhhhhhhhhhccccchHHHHHHHHHHHHHHhhh
Q 012902 49 CVGNFEQIFIVFGQVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALT 128 (454)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~l~ 128 (454)
...+++ +..++.....+..|.+.+++|.|..+.+++.+.+.++..++.+++|+++||+|||+++..+.++.+++.+++
T Consensus 15 ~~~~~~--~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~ 92 (471)
T PRK10504 15 VAFGFF--MQSLDTTIVNTALPSMAQSLGESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVRNIFFTAIVLFTLGSLFC 92 (471)
T ss_pred HHHHHH--HHHHhHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHH
Confidence 334444 577888888899999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcccccHHHHHHHHHHHHhhcccchhhhhHHHhhhcCccchHHHHHHHHhhHHHHHHhHHhHHHHHhhccCcchhHHHH
Q 012902 129 PVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSF 208 (454)
Q Consensus 129 ~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~ig~~l~~~l~~~~gwr~~f~~~ 208 (454)
++++ +++.+++.|+++|++.+...+...+++.|++|+++|+++.++.....++|..+||.+++.+.++.|||+.|++.
T Consensus 93 ~~~~--~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~~~~gw~~~f~~~ 170 (471)
T PRK10504 93 ALSG--TLNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLVEYASWHWIFLIN 170 (471)
T ss_pred HHhC--CHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhccHHHHHHHH
Confidence 9998 99999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred hHHHHHHHHHHHHhcCCCCCCCCCCChhhhh---------------hh----------------------hhccccCCCC
Q 012902 209 GSLGTVWFTVWLSKAHSSPAEDPQLRPAEKK---------------LI----------------------VSSCASKEPV 251 (454)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~----------------------~~~~~~~~~~ 251 (454)
.+...+..+......|+.+.+..+.+..... .. ...++.+.+.
T Consensus 171 ~~~~~l~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (471)
T PRK10504 171 IPVGIIGAIATLMLMPNYTMQTRRFDLSGFLLLAVGMATLTLALDGSKGLGLSPLAIAGLVAVGVVALLLYLLHARNNNR 250 (471)
T ss_pred HHHHHHHHHHHHHhCCCccccCCCCChHHHHHHHHHHHHHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 8877777666666555544332221111000 00 0000111111
Q ss_pred CCcchhHhhcCcchHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCcccchhhHhHHHHHHHHHHHHHHHHHhhhhhhcCc
Q 012902 252 KTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGL 331 (454)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~ 331 (454)
+..+. +++|||+++......++..........+.|.|++...|.++.++++......++.+++.++.+++.||+++|+.
T Consensus 251 ~~~~~-~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~g~~~~ 329 (471)
T PRK10504 251 ALFSL-KLFRTRTFSLGLAGSFAGRIGSGMLPFMTPVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNRFGYRRV 329 (471)
T ss_pred CccCH-HHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHH
Confidence 22333 37899999998888888888887778889999998789999999999999888899999999999999998843
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHhhc-cChhHH-HHHHHHHHHhhhhhhcchhhhhhcccccccchhHHHHHHHHHHHHH
Q 012902 332 SVTTVRKIMQSIGFLGPAFFLTQLSH-VDSPAM-AVLCMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAG 409 (454)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~ 409 (454)
. .................. .+..+. .....+.+.+.+....+......+..++++++.+.|+.++..++|.
T Consensus 330 ~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~ 402 (471)
T PRK10504 330 L-------VATTLGLALVSLLFMLVALLGWYYLLPFVLFLQGMVNSTRFSSMNTLTLKDLPDNLASSGNSLLSMIMQLSM 402 (471)
T ss_pred H-------HHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHhccchHHHHHHHHHHHH
Confidence 2 212221111111111111 122222 2223333333333343444444566777899999999999999999
Q ss_pred HHHHHHHHHHhccCCch
Q 012902 410 VFGTAATGYILQHGSWD 426 (454)
Q Consensus 410 ~~~~~~~g~l~~~~g~~ 426 (454)
.+|+.+.|.+.+..++.
T Consensus 403 ~ig~~i~g~ll~~~g~~ 419 (471)
T PRK10504 403 SIGVTIAGLLLGLFGQQ 419 (471)
T ss_pred HHHHHHHHHHHHHhhhh
Confidence 99999999999886664
No 36
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=100.00 E-value=7.2e-36 Score=282.95 Aligned_cols=361 Identities=16% Similarity=0.098 Sum_probs=272.7
Q ss_pred HHhhhchhhhhcchh-hhhhcCCChhhHHHHHHHHHHHHHHhhhhhhhhhccccchHHHH-HHHHHHHHHHhhhhhcccc
Q 012902 57 FIVFGQVNMSIAILP-MSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLG-FGVVWWSIATALTPVAAKL 134 (454)
Q Consensus 57 ~~~~~~~~~~~~~~~-i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~-~~~~~~~~~~~l~~~~~~~ 134 (454)
+..+......+.+|. +++++|.|+.+.|++.+.+.+...+.+++.|+++||+||||.+. .+.++.+++.+++++++
T Consensus 8 ~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~-- 85 (375)
T TIGR00899 8 LTGIAGALQFPTLSLFLSEEVRARPAMIGLFYTGSAIVGIAVSQLLATRSDYQGDRKGLILFCCLLAALACLLFAWNR-- 85 (375)
T ss_pred HHHHHHHHHhhHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHhcc--
Confidence 456666777777776 67899999999999999999999999999999999999988755 46666677888889999
Q ss_pred cHHHHHHHHHHHHhhcccchhhhhHHHhhhcCccchHHH--HHHHHhhHHHHHHhHHhHHHHHhhccCcchhHHHHhHHH
Q 012902 135 GLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRS--LALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLG 212 (454)
Q Consensus 135 ~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~--~~~~~~~~~~g~~ig~~l~~~l~~~~gwr~~f~~~~~~~ 212 (454)
|++.+++.|+++|.+.+...|...+++.|+.|+++|++. .+....+.++|.++||++++.+.+.+|||+.|++.+...
T Consensus 86 ~~~~l~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~~~~~~~f~~~~~~~ 165 (375)
T TIGR00899 86 NYFLLLVLGVLLSSFASTANPQLFALAREHADRTGREAVMFSSVMRAQISLAWVIGPPLAFWLALGFGFTVMFLTAALAF 165 (375)
T ss_pred hHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhHHHHHhhhHHHHHHHhcccHHHHHHHHHHH
Confidence 999999999999988888888888999999887777754 688888899999999999999999999999999999888
Q ss_pred HHHHHHHHHhcCCCCCCCCCCChhhhhhhhhccccCCCCCCcchhHhhcCcchHHHHHHHHHHHHHHHHHHhhHHHHHHH
Q 012902 213 TVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQ 292 (454)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 292 (454)
++..++.++..||+|+++++.++ ..+.++.+++|+++......++..........++|.|+++
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (375)
T TIGR00899 166 VLCGVLVWLFLPSYPRGAPGALT-----------------RLEVRGLLASRDTRLLFVACTLMWGCNILYIINMPLLIIH 228 (375)
T ss_pred HHHHHHHHHhCCCcccCcccccC-----------------cchhhhhhcCcchHHHHHHHHHHHHHHHHHHhhhHHHHHH
Confidence 77777766667776543221100 1123346678888776666666655566667788999988
Q ss_pred HhCCcccchhhHhHHHHHHHHHHHHHHHHHhhhhhhcCccchhhHHHHHHHHHHHHHHHHHHhhccChhHHHHHH-HHHH
Q 012902 293 VLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLC-MACS 371 (454)
Q Consensus 293 ~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 371 (454)
.+|.++.+.+..........+++.+..|++.||+++|+... . +..............++.+..... .+.+
T Consensus 229 ~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~-------~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 299 (375)
T TIGR00899 229 ELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRFGKRRLML-------L--AALAGVAFYTGLAADNSLWALLMLQLLNA 299 (375)
T ss_pred HcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchhHHH-------H--HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88999999998888877778888999999999999885322 1 111111111111112223322222 2223
Q ss_pred HhhhhhhcchhhhhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHHHHh
Q 012902 372 QGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWNLF 446 (454)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 446 (454)
.+.+ ...+.......+..|++++++.|+++...++|..++|.+.|.+.|..||+..+++.+++.+++.+.....
T Consensus 300 ~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 373 (375)
T TIGR00899 300 IFIG-ILAGIGMLYFQDLMPGRAGAATTLYTNTGRVGWIIAGSVGGILAERWSYHAVYWFAIVMLIVALFCLLLI 373 (375)
T ss_pred HHHH-HHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHhee
Confidence 3333 3334444455666777788999999999999999999999999999999999999988888777665443
No 37
>PRK15075 citrate-proton symporter; Provisional
Probab=100.00 E-value=1.2e-35 Score=285.76 Aligned_cols=361 Identities=13% Similarity=0.113 Sum_probs=245.8
Q ss_pred chHHHHHHHHHHHHHHHHhhhchhhhhcchhhhhhcCCChhhHHHHH-HHH-----HHHHHHhhhhhhhhhccccchHHH
Q 012902 41 SYKQIISLCVGNFEQIFIVFGQVNMSIAILPMSAEFNWNPATVGLIQ-SSF-----FWGYLLTQIAGGIWADTVGGKAVL 114 (454)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~-s~~-----~~~~~~~~~~~g~l~dr~Grr~~~ 114 (454)
.|++......++.+ ++.+|+..+++..|.+.+|++.++.+.+.+. +.. .++..+++++.|+++||+|||+++
T Consensus 12 ~~~~~~~~~~~~~~--~~~~d~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l 89 (434)
T PRK15075 12 SKARAILRVTSGNF--LEMFDFFLFGFYATAIAKTFFPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRVGRRKGL 89 (434)
T ss_pred hhHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhchHHHH
Confidence 44555666666666 8999999999999999999998887765443 322 223347889999999999999999
Q ss_pred HHHHHHHHHHHhhhhhcccccHH--------HHHHHHHHHHhhcccchhhhhHHHhhhcCccchHHHHHHHHhhHHHHHH
Q 012902 115 GFGVVWWSIATALTPVAAKLGLP--------FLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSV 186 (454)
Q Consensus 115 ~~~~~~~~~~~~l~~~~~~~~~~--------~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~ 186 (454)
..+.++++++++++++++ +++ .++++|+++|++.+...+....+++|++|+|+|++++++.+.+..+|..
T Consensus 90 ~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~~~~~g~~ 167 (434)
T PRK15075 90 IVTLSIMASGTLLIAFVP--GYATIGLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATPGRKGFYTSWQSASQQVAVV 167 (434)
T ss_pred HHHHHHHHHHHHHHHhCC--cHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHhhCCcccchHHHHHHHHHHHHHHH
Confidence 999999999999999999 776 4688999999999999999999999999999999999999999888888
Q ss_pred hHHhHHHHHh--------hccCcchhHHHHhHHHHHHHHHHHHhcCCCCCCCCCCChhhhhhhhhccccCCCCCCcchhH
Q 012902 187 TGLAFSPFLI--------HRFGWPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGL 258 (454)
Q Consensus 187 ig~~l~~~l~--------~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (454)
+++.+++.+. +.+|||++|++......+. .......||++ + ..+++ +++..+..+++
T Consensus 168 ~g~~~g~~l~~~~~~~~~~~~gWr~~f~~~~~~~~~~-~~~~~~~~e~~----~--~~~~~--------~~~~~~~~~~~ 232 (434)
T PRK15075 168 FAALLGYLLNQWLSPAQMAEWGWRIPFLIGCLIVPFI-FLIRRSLEETE----E--FLARK--------HRPSMREIFRS 232 (434)
T ss_pred HHHHHHHHHHHhCCHHHHhccchHHHHHHHHHHHHHH-HHHHHhcCCCH----H--HHHhh--------hccccccHHHH
Confidence 8888877663 4689999999754332211 11111112211 0 00000 00011122344
Q ss_pred hhcCcchHHH-HHHHHHHHHHHHHHHhhHHHHHHHHhCCcccchhhHhHHHHHHHHHHHHHHHHHhhhhhhcCccchhhH
Q 012902 259 ILSKPPVWAL-IVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVR 337 (454)
Q Consensus 259 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~ 337 (454)
..++++.+.. ....++....++....|.|.|+++.+|+++.++++......++.+++.++.|+++||++||+.....
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~-- 310 (434)
T PRK15075 233 LAANWRIVLAGMLMVAMTTVSFYLITVYTPTFGKTVLHLSAADSLLVTLCVGVSNFIWLPIGGALSDRIGRRPVLIAF-- 310 (434)
T ss_pred HHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHH--
Confidence 4555555433 3334445566777889999999998899999999888888999999999999999999998532211
Q ss_pred HHHHHHHHHHHHHHHHHhhccChhHHH-HHHHHHHHhhhhhhcchhhhhhcccccccchhHHHHHHHHHHH-HHHHHHHH
Q 012902 338 KIMQSIGFLGPAFFLTQLSHVDSPAMA-VLCMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVL-AGVFGTAA 415 (454)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-g~~~~~~~ 415 (454)
..................+..... ....+.+.+.+...........+..|++.|+++.|+.+..... ++.++|.+
T Consensus 311 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~e~~p~~~rg~~~g~~~~~~~~~~g~~~p~~ 387 (434)
T PRK15075 311 ---TVLAILTAYPALSWLVAAPSFARMLAVELWLSFLYGSYNGAMVVALTEVMPAEVRTAGFSLAYSLATAIFGGFTPAI 387 (434)
T ss_pred ---HHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHhhHHHHHHHHCCCCccchheeHHHHHHHHHHhhhHHHH
Confidence 001111110111111112222112 2222222333222222223344556678899999997655554 58889999
Q ss_pred HHHHhccCCc
Q 012902 416 TGYILQHGSW 425 (454)
Q Consensus 416 ~g~l~~~~g~ 425 (454)
.|.+.|+.|+
T Consensus 388 ~g~i~~~~g~ 397 (434)
T PRK15075 388 STWLIHVTGD 397 (434)
T ss_pred HHHHHHhcCC
Confidence 9999998775
No 38
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=100.00 E-value=3.1e-36 Score=295.01 Aligned_cols=387 Identities=17% Similarity=0.160 Sum_probs=269.4
Q ss_pred HHHhhhchhhhhcchhhhhhcCCC--------hhhHHHHHHHHHHHHHHhhhhhhhhhccccchHHHHHHHHHHHHHHhh
Q 012902 56 IFIVFGQVNMSIAILPMSAEFNWN--------PATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATAL 127 (454)
Q Consensus 56 ~~~~~~~~~~~~~~~~i~~~~~~s--------~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~l 127 (454)
+...++.....+..|.+.++++.+ ..+.+++.+++.++..++++++|+++||+|||+++..+.++..++.++
T Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~ 117 (481)
T TIGR00879 38 LMFGYDTGVIGGALALPAFEFKFTSANSDSYSSSLWGLVVSIFLVGGFIGALFAGWLSDRFGRKKSLLIIALLFVIGAIL 117 (481)
T ss_pred HhcccccchhhhhhhcHHHHHhcCCcccCCCChhHHHHHHHHHHHHHHHHHHHhhHhhhhhhhHHHHHHHHHHHHHHHHH
Confidence 367788888899999988888777 899999999999999999999999999999999999999999999999
Q ss_pred hhhccc-ccHHHHHHHHHHHHhhcccchhhhhHHHhhhcCccchHHHHHHHHhhHHHHHHhHHhHH---HHHhhccCcch
Q 012902 128 TPVAAK-LGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFS---PFLIHRFGWPS 203 (454)
Q Consensus 128 ~~~~~~-~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~ig~~l~---~~l~~~~gwr~ 203 (454)
+.+.+. .+++.++++|+++|++.+...+...++++|++|+++|++++++.+.+..+|..+++.++ ....+..+||+
T Consensus 118 ~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~w~~ 197 (481)
T TIGR00879 118 MGLAAFALSVEMLIVGRVLLGIGVGIASALVPMYLSEIAPKALRGALTSLYQLAITFGILVAYGFGSGKVSLNNTLGWRI 197 (481)
T ss_pred HHHhccccchHHHHHHHHHHHhhhhHHHhHHHHHHHccCChhhhhhhhhHHHHHHHHHHHHHHHHHHHhhcCCCCccHHH
Confidence 865441 14568999999999999999999999999999999999999999999999999999999 66667789999
Q ss_pred hHHHHhHHHHHHHHHHHHhcCCCCCCCC--CCChhhhhhhhhcc--cc------------------CCCCCCcchhHhhc
Q 012902 204 VFYSFGSLGTVWFTVWLSKAHSSPAEDP--QLRPAEKKLIVSSC--AS------------------KEPVKTIPWGLILS 261 (454)
Q Consensus 204 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~--~~------------------~~~~~~~~~~~~~~ 261 (454)
.|++.+...++. ++..++.||+|+... +..++..+...+.. .+ +.+.....+++.++
T Consensus 198 ~f~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (481)
T TIGR00879 198 PLGLQLIPAGLL-FLGLFFLPESPRWLVGKGRVEEARKSLARLRGTSGEDKELLDELELIDIKRSIEKRSVQPSWGSLFS 276 (481)
T ss_pred HHHHHHHHHHHH-HHHHhcCCCChHHHHHcCChHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHhhccccHHHHHh
Confidence 999966555554 344455677653210 00010000000000 00 00000111223332
Q ss_pred C------cchHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCcccchhhHhHHHHHHHHHHHHHHHHHhhhhhhcCccchh
Q 012902 262 K------PPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTT 335 (454)
Q Consensus 262 ~------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~ 335 (454)
. +.++...+..+...........+.|.++++ .|++..+.+.......++.++++++.+++.||+++|+....+
T Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~ 355 (481)
T TIGR00879 277 STRRIRRRLFLGVVLQWFQQFTGINAIMYYSPTIFEN-AGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRFGRRPLLLIG 355 (481)
T ss_pred cCchhHHHHHHHHHHHHHHHHhCCeehHHHHHHHHHH-cCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHH
Confidence 2 222222333333333334456667777766 699998889999999999999999999999999998543221
Q ss_pred hHHHHHHHHHHHHHHHHHH---hhccC------hhHHHHHHHHHHHhhhhhhcchhhhhhcc-cccccchhHHHHHHHHH
Q 012902 336 VRKIMQSIGFLGPAFFLTQ---LSHVD------SPAMAVLCMACSQGTDAFSQSGLYSNHQD-IAPRYSGVLLGLSNTAG 405 (454)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~---~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~ 405 (454)
......+..... ....+ .........+...+......+.......+ .|+++|+++.|+.+...
T Consensus 356 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 428 (481)
T TIGR00879 356 -------AAGMAICLFVLGILGASFVTGSSKSSGNVAIVFILLFIAFFAMGWGPVPWVIVSEIFPLSLRPKGISIAVAAN 428 (481)
T ss_pred -------HHHHHHHHHHHHHHhhcccCCcccchhHHHHHHHHHHHHHHHccccCeehhhhhccCChHHHHHHHHHHHHHH
Confidence 111111111111 11111 22222333333333333333444455444 45578999999999999
Q ss_pred HHHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHHHHhccCCc
Q 012902 406 VLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWNLFSTGEK 451 (454)
Q Consensus 406 ~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 451 (454)
++|++++|.+.+.+.++.++...|++.+++.+++.++..++.++++
T Consensus 429 ~lg~~i~~~~~~~~~~~~~~~~~f~~~~~~~~~~~i~~~~~~~~~~ 474 (481)
T TIGR00879 429 WLANFIVGFLFPTMLESIGVGGVFIFFGGLNVLGLIFVYFFLPETK 474 (481)
T ss_pred HHHHHHHHHHHHHHHHhcCccceehhHHHHHHHHHHHHheecccCC
Confidence 9999999999999999989999999988888877777665544443
No 39
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=100.00 E-value=1.5e-35 Score=282.76 Aligned_cols=361 Identities=17% Similarity=0.143 Sum_probs=259.6
Q ss_pred HHhhhchhhhhcchh-hhhhcCCChhhHHHHHHHHHHHHHHhhhhhhhhhccccchHHHHHHHHHHHHHHhhhhhc---c
Q 012902 57 FIVFGQVNMSIAILP-MSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVA---A 132 (454)
Q Consensus 57 ~~~~~~~~~~~~~~~-i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~l~~~~---~ 132 (454)
...++.....+.+|. +++++|.|+.+.|++.+++.+++.+++++.|+++||+|||+++..+.++.+++.+.+.++ +
T Consensus 26 ~~~~~~~~~~~~l~~~i~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~ 105 (399)
T PRK05122 26 ISYLTIGLPLAVLPGYVHDQLGFSAFLAGLVISLQYLATLLSRPHAGRYADTLGPKKAVVFGLCGCALSGLLYLLAGLLA 105 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHhchhhHhHHhccCCcchHHHHHHHHHHHHHHHHHhhhhh
Confidence 477777788888887 678999999999999999999999999999999999999999999999888877665543 2
Q ss_pred c---ccHHHHHHHHHHHHhhcccchhhhhHHHhhhcCccchHHHHHHHHhhHHHHHHhHHhHHHHHhhccCcchhHHHHh
Q 012902 133 K---LGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFG 209 (454)
Q Consensus 133 ~---~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~ig~~l~~~l~~~~gwr~~f~~~~ 209 (454)
+ .+++.+++.|+++|++.+...+...+++.|++|+|+|++++++.+.+..+|.++|+.+++.+.+++|||+.+++..
T Consensus 106 ~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~ 185 (399)
T PRK05122 106 AWPVLSLLLLLLGRLLLGIGESLAGTGSILWGIGRVGALHTGRVISWNGIATYGALAIGAPLGVLLYHWGGLAGLGLLIM 185 (399)
T ss_pred ccchhHHHHHHHHHHHHHhhHHhhcchHHHHHHhhcChhhhccchhhhhhhhhHHHHHHHHHHHHHHHcccHHHHHHHHH
Confidence 0 1466789999999999999999999999999999999999999999999999999999999999999999988766
Q ss_pred HHHHHHHHHHHHhcCCCCCCCCCCChhhhhhhhhccccCCCCCCcchhHhhcCcchHHHHHHHHHHHHHHHHHHhhHHHH
Q 012902 210 SLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTY 289 (454)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (454)
+..++..... ...|+++++ ++ + +.++++.+| +.+.......+....+.....+.|.|
T Consensus 186 ~~~~~~~~~~-~~~~~~~~~----~~-~---------------~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (399)
T PRK05122 186 LLALLGLLLA-RPRPAVPPV----KG-E---------------RLPFRRVLG--RVWPYGMGLALASIGFGTIATFITLY 242 (399)
T ss_pred HHHHHHHHHH-hcCCCCCCC----Cc-c---------------chhHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6554432222 111221111 00 0 011222332 22222333344455566677888888
Q ss_pred HHHHhCCcccchhhHhHHHHHHHHHHHHHHHHHhhhhhhcCccchhhHHHHHHHHHHHHHHHHHHhhccChhHHHHHHHH
Q 012902 290 YNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLCMA 369 (454)
Q Consensus 290 l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 369 (454)
+++ .|. .+.+.......++.+++++..+++.||+++|+.. .....+......... ...+.........+
T Consensus 243 ~~~-~~~--~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~-------~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l 311 (399)
T PRK05122 243 YAA-RGW--DGAALALTLFGVAFVGARLLFGNLINRLGGLRVA-------IVSLLVEILGLLLLW-LAPSPWMALIGAAL 311 (399)
T ss_pred HHH-ccc--ccchHHHHHHHHHHHHHHHHHHHHHHHhccHHHH-------HHHHHHHHHHHHHHH-HhccHHHHHHHHHH
Confidence 877 465 3456667778888899999999999999987422 211111111111111 12222333333344
Q ss_pred HHHhhhhhhcchhhhhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHHHHhccC
Q 012902 370 CSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWNLFSTG 449 (454)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 449 (454)
.+.+.............+..++++|+++.|+++...++|..++|.+.|.+.|..||+..+++.+++.+++.+....++++
T Consensus 312 ~G~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (399)
T PRK05122 312 TGFGFSLVFPALGVEAVKRVPPQNRGAALGAYSVFLDLSLGITGPLAGLVASWFGYPSIFLAAALAALLGLALTWLLYRR 391 (399)
T ss_pred HHHhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 44444433333333344567778999999999999999999999999999999999999999988888887776665544
Q ss_pred Cc
Q 012902 450 EK 451 (454)
Q Consensus 450 ~~ 451 (454)
++
T Consensus 392 ~~ 393 (399)
T PRK05122 392 AP 393 (399)
T ss_pred cc
Confidence 43
No 40
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=100.00 E-value=3.8e-36 Score=290.14 Aligned_cols=389 Identities=12% Similarity=0.110 Sum_probs=284.4
Q ss_pred chHHHHHHHHHHHHHHHHhhhchhhhhcchhhhhhcCCChhhHHHHHHHHHHHHHHhhhhhhhhhccccchHHHHHHHHH
Q 012902 41 SYKQIISLCVGNFEQIFIVFGQVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVW 120 (454)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~ 120 (454)
++|.++..+++... ....+...++...|++.+++|.|.++.+++.+.+.++..++.++.|+++||+|||++++.+.++
T Consensus 16 ~~w~i~~~~~~~~~--~~~~~~~~~~~~~~~i~~~~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~ 93 (455)
T TIGR00892 16 WGWVVLGATFVSIG--FSYAFPKAVTVFFKELQQIFQATYSETAWISSIMLAVLYAGGPISSILVNRFGCRPVVIAGGLL 93 (455)
T ss_pred cchHHHHHHHHHHH--HHHhhhcchhhhHHHHHHHhCcchhHHHHHHHHHHHHHHHhhHHHHHHHHHcCchHHHHhhHHH
Confidence 45666666665555 5555666678889999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhhhcccccHHHHHH-HHHHHHhhcccchhhhhHHHhhhcCccchHHHHHHHHhhHHHHHHhHHhHHHHHhhcc
Q 012902 121 WSIATALTPVAAKLGLPFLLV-VRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRF 199 (454)
Q Consensus 121 ~~~~~~l~~~~~~~~~~~l~~-~r~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~ig~~l~~~l~~~~ 199 (454)
.+++++++++++ +++.+++ .|+++|++.+...+....++.|+++ ++|+++.++.+.+..+|..++|++++.+.+.+
T Consensus 94 ~~~~~~~~~~~~--~~~~l~~~~~~l~G~~~~~~~~~~~~~~~~~~~-~~r~~a~g~~~~~~~~g~~~~~~l~~~l~~~~ 170 (455)
T TIGR00892 94 ASLGMILASFSS--NVIELYLTAGFITGLGLAFNFQPSLTMLGKYFY-RRRPLANGLAMAGSPVFLSTLAPLNQYLFESF 170 (455)
T ss_pred HHHHHHHHHHhh--hHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHH-hhHHHHHHHHHhcccHHHHHHHHHHHHHHHHh
Confidence 999999999999 8888865 5799999998877788888999995 88999999999999999999999999999999
Q ss_pred CcchhHHHHhHHHHHHHHHHHHhcCCCCCCCCCCCh-hhh---hhhhhcc-c---cCCCCCCcchhHhhcCcchHHHHHH
Q 012902 200 GWPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRP-AEK---KLIVSSC-A---SKEPVKTIPWGLILSKPPVWALIVS 271 (454)
Q Consensus 200 gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~---~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (454)
|||+.|++.+++.++..+..++..++++.++....+ ++. ....++. . .++..+..++ +.+++|+++.....
T Consensus 171 gwr~~f~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 249 (455)
T TIGR00892 171 GWRGSFLILGGLLLHCCVCGALMRPVGPSQRVSKSKSKEGLPPDGSTKKLSKKSTAEKINRFLDF-SLFTHRGFLVYLSG 249 (455)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHhCCCCcccccccccccccCCCCCccccccccchhhhhhhhcch-HHhcCchHHHHHHH
Confidence 999999999988776655544444432211100000 000 0000000 0 0000001112 47889999988888
Q ss_pred HHHHHHHHHHHHhhHHHHHHHHhCCcccchhhHhHHHHHHHHHHHHHHHHHhhhhhhcCccchhhHHHHHHHHHHHHHHH
Q 012902 272 HFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFF 351 (454)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (454)
.++...+++....++|.|+++ .|+++.+++...+..+++.+++++..+++.||...++. +......+....+..
T Consensus 250 ~~l~~~~~~~~~~~l~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~-----~~~~~~~~~~~~~l~ 323 (455)
T TIGR00892 250 NVIMFLGFFAPIIFLVPYAKD-KGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPH-----VQYLFSFALLFNGLT 323 (455)
T ss_pred HHHHHHHccchHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHH-----HHHHHHHHHHHHHHH
Confidence 888888888888899999987 69999999999999999999999999999997432110 112222222222222
Q ss_pred HHHhhccChhH-HHHHHHHHHHhhhhhhcchhhhhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHhccC-CchhHH
Q 012902 352 LTQLSHVDSPA-MAVLCMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHG-SWDDVF 429 (454)
Q Consensus 352 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~-g~~~~~ 429 (454)
.......++.+ ..+..++.+.+.+...........+..++++++++.|+++...++|++++|.+.|.+.|.. +|+..|
T Consensus 324 ~ll~~~~~~~~~~~i~~~~~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~~f 403 (455)
T TIGR00892 324 HLLCALAGDYTGLVIYCIFFGLSFGSVGALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLAGRLVDATKNYKYIF 403 (455)
T ss_pred HHHHHHhchHHHHHHHHHHHHHHhchHHHHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHccccceeeeehhcCCcchHH
Confidence 11222223333 3334444444444444443444455667789999999999999999999999999999985 699999
Q ss_pred HHHHHHHHHHHH
Q 012902 430 KVSVGLYLVGTA 441 (454)
Q Consensus 430 ~~~~~~~~~~~~ 441 (454)
++.+++.+++.+
T Consensus 404 ~~~~~~~li~~~ 415 (455)
T TIGR00892 404 YASGSIVVSAGL 415 (455)
T ss_pred HHhhHHHHHHHH
Confidence 888887766654
No 41
>PRK03633 putative MFS family transporter protein; Provisional
Probab=100.00 E-value=5e-35 Score=277.06 Aligned_cols=361 Identities=14% Similarity=0.058 Sum_probs=265.3
Q ss_pred HHHHHHHHHHHHhhhchhhhhcchhhhhhcCCChhhHHHHHHHHHHHHHHhhhhhhhhhccccchHHHHHHHHHHHHHHh
Q 012902 47 SLCVGNFEQIFIVFGQVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATA 126 (454)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~ 126 (454)
.....+.+ +...+.....+.+|.+.+|+|.|..+.|++.+.+.++..+++++.|+++||+|||+++..+.++.+++.+
T Consensus 9 ~~~~~~~~--~~~~~~~~~~~~lp~~~~~~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~g~k~~~~~~~~~~~~~~~ 86 (381)
T PRK03633 9 LLLLCGLL--LLTLAIAVLNTLVPLWLAQEHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRIGFNRSYYLASLIFAAGCA 86 (381)
T ss_pred HHHHHHHH--HHHHhhhhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33334444 5778888899999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhcccccHHHHHHHHHHHHhhcccchhhhhHHHhhhcCccchHHHHHHHHhhHHHHHHhHHhHHHHHhhccCcchhHH
Q 012902 127 LTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFY 206 (454)
Q Consensus 127 l~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~ig~~l~~~l~~~~gwr~~f~ 206 (454)
++++++ |++.++++|+++|++.+...+...+.+.|..++++|+++++.+..+.++|..+|+.+++.+.+...|+..+.
T Consensus 87 ~~~~~~--~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~ 164 (381)
T PRK03633 87 GLGLMV--GFWSWLAWRFVAGIGCAMIWVVVESALMCSGTSRNRGRLLAAYMMVYYLGTVLGQLLVSKVSTELMSVLPWV 164 (381)
T ss_pred HHHHhc--cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccchHHHH
Confidence 999999 999999999999999998889888888899999999999999999999999999999999877544443333
Q ss_pred HHhHHHHHHHHHHHHhcCCCCCCCCCCChhhhhhhhhccccCCCCCCcchhHhhcCcchHHHHHHHHHHHHHHHHHHhhH
Q 012902 207 SFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWM 286 (454)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (454)
.+........+ .+ .+.+++++++ + +..+.++.+|+|.++......+.....+.....++
T Consensus 165 -~~~~~~~~~~~-~~-~~~~~~~~~~----~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 223 (381)
T PRK03633 165 -TGLVLAAILPL-LF-TRILNQQAEN----H--------------DSTSIWPMLKLRQARLGVNGCIISGIVLGSLYGLM 223 (381)
T ss_pred -HHHHHHHHHHH-HH-hcccCCCCCC----C--------------CCCCHHHHHHhcchHHHHHHHHHHHHHHHHHHHHH
Confidence 23222222122 22 1221111100 0 01234557888888766555555555666677889
Q ss_pred HHHHHHHhCCcccchhhHhHHHHHHHHHHHHHHHHHhhhhhhcCccchhhHHHHHHHHHHHHHHHHHHhhccChhHHHHH
Q 012902 287 PTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVL 366 (454)
Q Consensus 287 ~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 366 (454)
|.|+++ .|.++.+++.......++.+++++..|++.||+++|+... ............. .. .......
T Consensus 224 p~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~-------~~~~~~~~~~~~~--~~--~~~~~~~ 291 (381)
T PRK03633 224 PLYLNH-QGMSDASIGFWMALLVSAGILGQWPIGRLADRFGRLLVLR-------VQVFVVILGSIAM--LS--QAAMAPA 291 (381)
T ss_pred HHHHHH-cCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHcCcHHHHH-------HHHHHHHHHHHHH--hh--hHHHHHH
Confidence 999988 5999999999999999999999999999999999884322 1111111111111 11 1112222
Q ss_pred HHHHHHhhhhhhcchhhh-hhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHHHH
Q 012902 367 CMACSQGTDAFSQSGLYS-NHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWNL 445 (454)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 445 (454)
..+.+.+..... +.... ..+..++++++...+..+...++|..++|.+.|.+.|+.+++..|.+.+.+.++..+..+.
T Consensus 292 ~~l~g~~~~~~~-p~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~igp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~~~ 370 (381)
T PRK03633 292 LFILGAAGFTLY-PVAMAWACEKVEHHELVAMNQALLLSYTVGSLLGPSFTAMLMQNYSDNLLFIMIASVSFIYLLMLLR 370 (381)
T ss_pred HHHHHHHHHhHH-HHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHh
Confidence 233333333333 33333 3455666677888888888899999999999999999999999999888887766544333
No 42
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=100.00 E-value=1.7e-35 Score=289.44 Aligned_cols=399 Identities=13% Similarity=0.085 Sum_probs=264.3
Q ss_pred hHHHHHHHHHHHHHHHHhhhchhhhhcchhhhhhc--------CCChhhHHHHHHHHHHHHHHhhhhhhhhhccccchHH
Q 012902 42 YKQIISLCVGNFEQIFIVFGQVNMSIAILPMSAEF--------NWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAV 113 (454)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~--------~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~ 113 (454)
.+++..++.++.+ .++++...+++..|.+++++ +.+..+.+++.+++.++..++++++|+++||+|||++
T Consensus 10 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ig~~~~~~~~G~l~dr~Grr~~ 87 (479)
T PRK10077 10 IFSITLVATLGGL--LFGYDTAVISGTVESLNTVFVAPQNLSESAANSLLGFCVASALIGCIIGGALGGYCSNRFGRRDS 87 (479)
T ss_pred HHHHHHHHHHHHH--hcCcccceehHhHHHHHHHhcccccccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHH
Confidence 3444455555555 79999999999999888877 8888999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhhhc---------cc-ccHHHHHHHHHHHHhhcccchhhhhHHHhhhcCccchHHHHHHHHhhHHH
Q 012902 114 LGFGVVWWSIATALTPVA---------AK-LGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYL 183 (454)
Q Consensus 114 ~~~~~~~~~~~~~l~~~~---------~~-~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~ 183 (454)
+..+.++++++.++++++ ++ .+++.++++|+++|++.|...+...++++|++|+|+|++++++.+.+..+
T Consensus 88 ~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~~ 167 (479)
T PRK10077 88 LKIAAVLFFISALGSAWPEFGFTSIGPDNTGYVPEFVIYRIIGGIGVGLASMLSPMYIAEIAPAHIRGKLVSFNQFAIIF 167 (479)
T ss_pred HHHHHHHHHHHHHHHHhhccccccccccchhHHHHHHHHHHHHhhhHhHHhhHHHHHHHhhCChhhhhHHHHHHHHHHHH
Confidence 999999999998887763 10 13567889999999999999999999999999999999999999999999
Q ss_pred HHHhHHhHHHHHh--------hccCcchhHHHHhHHHHHHHHHHHHhcCCCCCCCCCCChhhh-hhhhhcccc-CC-CCC
Q 012902 184 GSVTGLAFSPFLI--------HRFGWPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEK-KLIVSSCAS-KE-PVK 252 (454)
Q Consensus 184 g~~ig~~l~~~l~--------~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~-~~~ 252 (454)
|..+++.++..+. +.+|||+.|++.+++.++..+ ..++.||+|++..++++.++ +...++... ++ +..
T Consensus 168 G~~~~~~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~-~~~~l~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (479)
T PRK10077 168 GQLVVYFVNYFIARSGDASWLNTDGWRYMFASEAIPALLFLM-LLYFVPETPRYLMSRGKQEQAEGILRKIMGNTLATQA 246 (479)
T ss_pred HHHHHHHHHHHHhccCcccccccCChHHHHHHHHHHHHHHHH-HHHcCCCCcHHHHHcCCHHHHHHHHHHHcCChhHHHH
Confidence 9999988776553 357999999998877777644 45567887753211111111 000000000 00 000
Q ss_pred CcchhHhhc-----CcchHH-----H----HHHHHHHHHHHHHHHhhHHHHHHHHhCCcccchhhHhHHHHHHHHHHHHH
Q 012902 253 TIPWGLILS-----KPPVWA-----L----IVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANL 318 (454)
Q Consensus 253 ~~~~~~~~~-----~~~~~~-----~----~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~ 318 (454)
..+.++.++ .+..+. . ....+.....++...++.|.+.++ .|.+...........++..+++.++
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~-~g~~~~~~~~~~~~~~~~~~i~~~~ 325 (479)
T PRK10077 247 LQEIKHSLDHGRKTGGKLLMFGVGVIVIGVMLSVFQQFVGINVVLYYAPEIFKT-LGASTDIALLQTIIVGVINLTFTVL 325 (479)
T ss_pred HHHHHHHHHHhhhhhhhhcchhHHHHHHHHHHHHHHHHhChhHHHHHHHHHHHH-cCCCCchHHHHHHHHHHHHHHHHHH
Confidence 001111111 011110 0 011111122233445566777766 6888877788778888899999999
Q ss_pred HHHHhhhhhhcCccchhhHHHHHHHHHHHHHHHHH-HhhccC--hhHHHHHHHHHHHhhhhhhcchhhhhh-cccccccc
Q 012902 319 GGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLT-QLSHVD--SPAMAVLCMACSQGTDAFSQSGLYSNH-QDIAPRYS 394 (454)
Q Consensus 319 ~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 394 (454)
.++++||++||+....+. .......... .....+ ...........+.+......+...... +..|+++|
T Consensus 326 ~g~l~dr~g~r~~~i~~~-------~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r 398 (479)
T PRK10077 326 AIMTVDKFGRKPLQIIGA-------LGMAIGMFSLGTAFYTQAPGIVALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIR 398 (479)
T ss_pred HHHHHHHhcChHHHHHhH-------HHHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHhccccchhHHHhHhhCChhHH
Confidence 999999999985433221 1111111111 111111 112222222223333322334444444 44555789
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHh------ccCCchhHHHHHHHHHHHHHHHHHHhccCCc
Q 012902 395 GVLLGLSNTAGVLAGVFGTAATGYIL------QHGSWDDVFKVSVGLYLVGTAVWNLFSTGEK 451 (454)
Q Consensus 395 ~~~~g~~~~~~~~g~~~~~~~~g~l~------~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 451 (454)
+++.|+.+...+++..+++.+.+.+. |..++...|++.++..+++.++.+++.+|+|
T Consensus 399 ~~~~g~~~~~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~ 461 (479)
T PRK10077 399 GKALAIAVAAQWIANYFVSWTFPMMDKNSWLVAHFHNGFSYWIYGCMGVLAALFMWKFVPETK 461 (479)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHhccchhhhccCccHHHHHHHHHHHHHHHHHhccccCC
Confidence 99999999999999999987776554 5677778888888777777666655555444
No 43
>PRK10133 L-fucose transporter; Provisional
Probab=100.00 E-value=4.4e-35 Score=280.70 Aligned_cols=368 Identities=13% Similarity=0.152 Sum_probs=265.9
Q ss_pred HHHHHHHHHHHHhhhchhhhhcchhhhhhcCCChhhHHHHHHHHHHHHHHhhhhhhhhhccccchHHHHHHHHHHHHHHh
Q 012902 47 SLCVGNFEQIFIVFGQVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATA 126 (454)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~ 126 (454)
.+..+.++ ...++.....+..|.+++++|.|+.+.|++.+.+.+++.+++++.|++.||+|||+++..+.++++++.+
T Consensus 29 ~~~~~~~~--~~~~~~~~~~~~~p~i~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~ 106 (438)
T PRK10133 29 ALLCSLFF--LWAVANNLNDILLPQFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYALGAA 106 (438)
T ss_pred HHHHHHHH--HHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHH
Confidence 34444444 5778888889999999999999999999999999999999999999999999999999999999999998
Q ss_pred hh---hhcccccHHHHHHHHHHHHhhcccchhhhhHHHhhhcCccchHHHHHHHHhhHHHHHHhHHhHHHHHhh-c----
Q 012902 127 LT---PVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIH-R---- 198 (454)
Q Consensus 127 l~---~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~ig~~l~~~l~~-~---- 198 (454)
++ .+++ +++.++++|+++|+|.|...+..++++.|+.|+++|++.+++.+..+.+|..+|+.+++.+.. .
T Consensus 107 l~~~~~~a~--~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~~l~~~~~~~~ 184 (438)
T PRK10133 107 LFWPAAEIM--NYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLILSNVPHQ 184 (438)
T ss_pred HHHHHHhcC--CHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccc
Confidence 86 4678 999999999999999999999999999998877777778999999999999999999876541 0
Q ss_pred ---------------------cCcchhHHHHhHHHH-HHHHHHHHhcCCCCCCCCCCChhhhhhhhhccccCCCCCCcch
Q 012902 199 ---------------------FGWPSVFYSFGSLGT-VWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPW 256 (454)
Q Consensus 199 ---------------------~gwr~~f~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (454)
.+||++|+....+.. +..++.....||.+++++ ++ ++ +.....+.
T Consensus 185 ~~~~~~~l~~~~~~~w~~~~~~~w~~~f~~~~~v~~~~~~~~~~~~~p~~~~~~~--~~-~~----------~~~~~~~~ 251 (438)
T PRK10133 185 SQDVLDKMTPEQLSAYKHSLVLSVQTPYMIIVAIVLLVALLIMLTKFPALQSDNH--SD-AK----------QGSFSASL 251 (438)
T ss_pred chhhhhccChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccc--cc-cc----------ccchhhhH
Confidence 246666664443333 332222222333221110 00 00 00012335
Q ss_pred hHhhcCcchHHHHHHHHHHHHHHHHHHhhHHHHH-HHHhCCcccchhhHhHHHHHHHHHHHHHHHHHhhhhhhcCccchh
Q 012902 257 GLILSKPPVWALIVSHFCHNWGTFILLTWMPTYY-NQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTT 335 (454)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~ 335 (454)
++++|+|.++...+..++......+...|.+.|+ ++.+|.++.+++..+....++.+++++..+++.||+++|+...
T Consensus 252 ~~ll~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~g~~~~l~-- 329 (438)
T PRK10133 252 SRLARIRHWRWAVLAQFCYVGAQTACWSYLIRYAVEEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHKVLA-- 329 (438)
T ss_pred HHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHH--
Confidence 5688999998877777787788888888999885 5668999999999999999999999999999999999985322
Q ss_pred hHHHHHHHHHHHHHHHHHHhhccChhHHHHHHHHHHHhhhhhhcchhhhhhcccccccchhHHHHHHHHHHHHHHHHHHH
Q 012902 336 VRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLCMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAA 415 (454)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~ 415 (454)
....+.......... . +.......+.+.+++.+. ..|.......+..|++.+++.++.. +..+|+.++|.+
T Consensus 330 -----~~~~~~~~~~~~~~~-~-~~~~~~~~~~l~glg~~~-i~P~~~s~a~~~~~~~~~~as~l~~-~~~~g~~~~~~i 400 (438)
T PRK10133 330 -----AYALIAMALCLISAF-A-GGHVGLIALTLCSAFMSI-QYPTIFSLGIKNLGQDTKYGSSFIV-MTIIGGGIVTPV 400 (438)
T ss_pred -----HHHHHHHHHHHHHHH-c-CChHHHHHHHHHHHHHHH-HHHHHHHHHHcccchhhccchhHHh-HHhccchHHHHH
Confidence 111111111111111 1 122223334444444444 4455555554445566778888875 455789999999
Q ss_pred HHHHhccCC-chhHHHHHHHHHHHHHHH
Q 012902 416 TGYILQHGS-WDDVFKVSVGLYLVGTAV 442 (454)
Q Consensus 416 ~g~l~~~~g-~~~~~~~~~~~~~~~~~~ 442 (454)
.|.+.|..| .+..|++..++.+.....
T Consensus 401 ~G~l~~~~g~~~~~~~v~~~~~~~~~~~ 428 (438)
T PRK10133 401 MGFVSDAAGNIPTAELIPALCFAVIFIF 428 (438)
T ss_pred HHHHHHhccchHHHHHHHHHHHHHHHHH
Confidence 999999877 778887655555544433
No 44
>PRK12382 putative transporter; Provisional
Probab=100.00 E-value=8.4e-35 Score=276.94 Aligned_cols=356 Identities=14% Similarity=0.121 Sum_probs=252.2
Q ss_pred HHhhhchhhhhcchh-hhhhcCCChhhHHHHHHHHHHHHHHhhhhhhhhhccccchHHHHHHHHHHHHHHhhh---hh--
Q 012902 57 FIVFGQVNMSIAILP-MSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALT---PV-- 130 (454)
Q Consensus 57 ~~~~~~~~~~~~~~~-i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~l~---~~-- 130 (454)
..........+.+|. +++|+|.|.++.|++.+++.+++.++++++|+++||+|||+++..+.+...++.+.+ +.
T Consensus 26 ~~~~~~~~~~p~l~~~l~~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~ 105 (392)
T PRK12382 26 LTYMTVGLPLPVIPLFVHHDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQYGAKRSALQGMLACGLAGLAYLLAAILP 105 (392)
T ss_pred HHHHHHHHHhhhhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHHHHHHHhhhccc
Confidence 455666677778886 678999999999999999999999999999999999999999999988777665432 22
Q ss_pred ---cccccHHHHHHHHHHHHhhcccchhhhhHHHhhhcCccchHHHHHHHHhhHHHHHHhHHhHHHHHhhccCcchhHHH
Q 012902 131 ---AAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYS 207 (454)
Q Consensus 131 ---~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~ig~~l~~~l~~~~gwr~~f~~ 207 (454)
.+ +++.++++|+++|++.+...+...+++.|++|+|+|++++++.+.+...|..+||++++.+.+.+|||+.+.+
T Consensus 106 ~~~~~--~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~ 183 (392)
T PRK12382 106 VSAPF--KFALLVVGRLILGFGESQLLTGALTWGLGLVGPKHSGKVMSWNGMAMYGALAAGAPLGLLLHSHFGFAALALT 183 (392)
T ss_pred cchhH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCccccchhhhHHHHHHHHHHHHHHHHHHHHHhccChHHHHHH
Confidence 24 7889999999999999988898999999999999999999999999999999999999999999999987776
Q ss_pred HhHHHHHHHHHHHHhcCCCCCCCCCCChhhhhhhhhccccCCCCCCcchhHhhcCcchHHHHHHHHHHHHHHHHHHhhHH
Q 012902 208 FGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMP 287 (454)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (454)
.....++.... ....||++++++ + +.+.++.+| .++...+...+..........+.|
T Consensus 184 ~~~~~~~~~~~-~~~~~~~~~~~~--~------------------~~~~~~~~~--~~~~~~~~~~l~~~~~~~~~~~~~ 240 (392)
T PRK12382 184 TMVLPLLAWAF-NGTVRKVPAHAG--E------------------RPSLWSVVG--LIWKPGLGLALQGVGFAVIGTFVS 240 (392)
T ss_pred HHHHHHHHHHH-HHhccCCCCCcc--c------------------CchHHHHHH--HHHHhHHHHHHHHHHHhHHHHHHH
Confidence 55444333221 122222211100 0 001111211 112111222333445556677888
Q ss_pred HHHHHHhCCcccchhhHhHHHHHHHHHHHHHHHHHhhhhhhcCccchhhHHHHHHHHHHHHHHHHHHhhccChhHHHHHH
Q 012902 288 TYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLC 367 (454)
Q Consensus 288 ~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 367 (454)
.|+++ .|++ +.+.......++.+++++..|++.||+++|+....+ ............. ..+........
T Consensus 241 ~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~-------~~~~~~~~~~~~~-~~~~~~~~~~~ 309 (392)
T PRK12382 241 LYFAS-KGWA--MAGFTLTAFGGAFVLMRVLFGWMPDRFGGVKVAIVS-------LLVETVGLLLLWL-APTAWVALAGA 309 (392)
T ss_pred HHHHh-cCCc--hhHHHHHHHHHHHHHHHHHHHHHHHhcCCCeehHHH-------HHHHHHHHHHHHH-cccHHHHHHHH
Confidence 88887 4665 355666677788889999999999999998654321 1111111111111 22222233333
Q ss_pred HHHHHhhhhhhcchhhhhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHHHHhc
Q 012902 368 MACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWNLFS 447 (454)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 447 (454)
.+.+.+.............+..++++||++.|+.+...++|..++|.+.|.+.|+.||+..|.+.+++.+++.++.....
T Consensus 310 ~l~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 389 (392)
T PRK12382 310 ALTGAGCSLIFPALGVEVVKRVPSQVRGTALGGYAAFQDIAYGVSGPLAGMLATSFGYPSVFLAGAISAVLGIIVTILSF 389 (392)
T ss_pred HHHHHHHHhHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHhhc
Confidence 33343333333333334456677789999999999999999999999999999999999999999988888877766554
Q ss_pred c
Q 012902 448 T 448 (454)
Q Consensus 448 ~ 448 (454)
+
T Consensus 390 ~ 390 (392)
T PRK12382 390 R 390 (392)
T ss_pred c
Confidence 4
No 45
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=100.00 E-value=1.1e-34 Score=277.86 Aligned_cols=367 Identities=16% Similarity=0.138 Sum_probs=267.9
Q ss_pred HHhhhchhhhhcchhhhhhcCCChhh-----HHHHHHHHHHHHHHhhhhhhhhhccccchHHHHHHHHHHHHHHhhhhhc
Q 012902 57 FIVFGQVNMSIAILPMSAEFNWNPAT-----VGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVA 131 (454)
Q Consensus 57 ~~~~~~~~~~~~~~~i~~~~~~s~~~-----~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~l~~~~ 131 (454)
+.........+.+|.+.+++|.+..+ .|++.+++.++..+++++.|+++||+|||+++..+.++.+++.++++++
T Consensus 25 ~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~ 104 (408)
T PRK09874 25 LTGAAFSLVMPFLPLYVEQLGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRKGRKIMLLRSALGMGIVMVLMGLA 104 (408)
T ss_pred HHHHHHHHhhhhHHHHHHHhCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCcHHHHHHHHHHHHHHHHHHHHH
Confidence 46667677888899999999988654 4889999999999999999999999999999999999999999999998
Q ss_pred ccccHHHHHHHHHHHHhhcccchhhhhHHHhhhcCccchHHHHHHHHhhHHHHHHhHHhHHHHHhhccCcchhHHHHhHH
Q 012902 132 AKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSL 211 (454)
Q Consensus 132 ~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~ig~~l~~~l~~~~gwr~~f~~~~~~ 211 (454)
+ +++.+++.|++.|++.+ ..+....++.|++|+++|++++++......+|..++|.+++.+.+..+||+.|++.+++
T Consensus 105 ~--~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~ 181 (408)
T PRK09874 105 Q--NIWQFLILRALLGLLGG-FVPNANALIATQVPRNKSGWALGTLSTGGVSGALLGPLAGGLLADSYGLRPVFFITASV 181 (408)
T ss_pred h--hHHHHHHHHHHHHHhhh-hHHhHHHHHHHhcCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHH
Confidence 8 99999999999999865 56778889999999999999999999999999999999999999989999999999988
Q ss_pred HHHHHHHHHHhcCCCCCCCCCCChhhhhhhhhccccCCCCCCcchhHhhcCcchHHH-HHHHHHHHHHHHHHHhhHHHHH
Q 012902 212 GTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWAL-IVSHFCHNWGTFILLTWMPTYY 290 (454)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l 290 (454)
.++..+...+..||++++.++.++.+ ..+..+.+++|+++.. ................++|.|.
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (408)
T PRK09874 182 LFLCFLVTLFCIRENFQPVSKKEMLH---------------MREVVTSLKNPKLVLSLFVTTLIIQVATGSIAPILTLYV 246 (408)
T ss_pred HHHHHHHHHHHhccCcccccchhhhH---------------HHHHHHhCcCCchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 87776666666666543221111000 0112234567776543 3333444445555667788888
Q ss_pred HHHhCCccc---chhhHhHHHHHHHHHHHHHHHHHhhhhhhcCccchhhHHHHHHHHHHHHHHHHHHhhccChhHH-HHH
Q 012902 291 NQVLHFNLT---ESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAM-AVL 366 (454)
Q Consensus 291 ~~~~g~s~~---~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 366 (454)
.+..+.... ..+.+.....++.+++.+..|++.||+++|+... .... ............++.+. ...
T Consensus 247 ~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~g~~~~~~-------~~~~--~~~~~~~~~~~~~~~~~~~~~ 317 (408)
T PRK09874 247 RELAGNVSNIAFISGMIASVPGVAALLSAPRLGKLGDRIGPEKILI-------TALI--FSVLLLIPMSFVQTPLQLGIL 317 (408)
T ss_pred HHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhHH-------HHHH--HHHHHHHHHHHhccHHHHHHH
Confidence 875332221 2355556667788888999999999999885432 1111 11111111111222333 333
Q ss_pred HHHHHHhhhhhhcchhhhhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHHHHh
Q 012902 367 CMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWNLF 446 (454)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 446 (454)
..+.+.+.+...........+..+++++|+..|+.+...++|..+||.+.|.+.|..||+..|++.+++.+++.+.....
T Consensus 318 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~~~~ 397 (408)
T PRK09874 318 RFLLGAADGALLPAVQTLLVYNSSNQIAGRIFSYNQSFRDIGNVTGPLMGAAISANYGFRAVFLVTAGVVLFNAVYSWNS 397 (408)
T ss_pred HHHHHhhhHhhHHHHHHHHHHhCCcccceeeehHHHHHHHHHHHhhHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHH
Confidence 33444444433333333334555667899999999999999999999999999999999999999999888877766554
Q ss_pred ccCC
Q 012902 447 STGE 450 (454)
Q Consensus 447 ~~~~ 450 (454)
.+++
T Consensus 398 ~~~~ 401 (408)
T PRK09874 398 LRRR 401 (408)
T ss_pred HHHh
Confidence 4333
No 46
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=100.00 E-value=7.5e-35 Score=276.08 Aligned_cols=370 Identities=15% Similarity=0.140 Sum_probs=268.1
Q ss_pred hhchhhhhcchhhhhhcCCChhhHHHHHHHHHHHHHHhhhhhhhhhccccchHHHHHHHHHHHHHHhhhhhcccccHHHH
Q 012902 60 FGQVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFL 139 (454)
Q Consensus 60 ~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~l~~~~~~~~~~~l 139 (454)
+....+.+.+|.+.+++|.|+++.+++.+++.++..+++++.|+++||+|||+++..+.++.+++.+++.+++ +++.+
T Consensus 5 ~~~~~~~p~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~~--~~~~~ 82 (377)
T PRK11102 5 LAIDMYLPALPVIAADFGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALAQ--TIDQL 82 (377)
T ss_pred hHHHHHhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHHHc--cHHHH
Confidence 3445667889999999999999999999999999999999999999999999999999999999999999999 99999
Q ss_pred HHHHHHHHhhcccchhhhhHHHhhhcCccchHHHHHHHHhhHHHHHHhHHhHHHHHhhccCcchhHHHHhHHHHHHHHHH
Q 012902 140 LVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVW 219 (454)
Q Consensus 140 ~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~ig~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~ 219 (454)
++.|+++|++.+...+...+++.|++|+|+|++++++.+....+|..++|.+++.+.+..+||+.|++.+.+.++..+..
T Consensus 83 ~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 162 (377)
T PRK11102 83 IYMRFLHGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWFSWHAIFWVLALAAILAAALV 162 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999888888776666
Q ss_pred HHhcCCCCCCCCCCChhhhhhhhhccccCCCCCCcchhHhhcCcchHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCccc
Q 012902 220 LSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLT 299 (454)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~ 299 (454)
.+..||+++++++.+.+.++ ...++++.+++|+++...+..++.......+..+.|.++.+.+|+++.
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~ 230 (377)
T PRK11102 163 FFFIPETLPKERRQPFHLRT------------TIRNFASLFRHKRVLGYMLASGFSFAGMFSFLTAGPFVYIELNGVSPQ 230 (377)
T ss_pred HHhCCccCcccccCCCChHH------------HHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHhCCCHH
Confidence 66666654332211110000 023455678899888777777777777777778888888888899999
Q ss_pred chhhHhHHHHHHHHHHHHHHHHHhhhhhhcCccchhhHHHHHHHHHHHHHHHHHHhh-ccChhHHHHHHHHHHHhhhhhh
Q 012902 300 ESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLS-HVDSPAMAVLCMACSQGTDAFS 378 (454)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 378 (454)
+.+.......++.+++++..+++.||+++|+....+. .............. .....+..........+.....
T Consensus 231 ~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (377)
T PRK11102 231 NFGYYFALNIVFLFVMTIINSRFVRRVGALNMLRFGL------WIQFIMGIWLVVSALLDLGFWALVVGVAAFVGCVSMI 304 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHH------HHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999985332111 11111111111111 1112222222222222222222
Q ss_pred cchhhhhhcccccccchhHHHHHHHHHH-HHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHHHHhccCCc
Q 012902 379 QSGLYSNHQDIAPRYSGVLLGLSNTAGV-LAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWNLFSTGEK 451 (454)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~-~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 451 (454)
.........+..|++++++.++.+.... +|..+++.+.+ ..+ .++...+...+++.+++.+..++..++++
T Consensus 305 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~g~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (377)
T PRK11102 305 SSNAMAVILDEFPHMAGTASSLAGTLRFGIGAIVGALLSL-APF-TSAWPMVWSMAFCSILSILFYLYASRPKK 376 (377)
T ss_pred hHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHHHHHh-ccC-CChHHHHHHHHHHHHHHHHHHHHhccccc
Confidence 3333334455567889999999877654 55566665543 222 23334444444444455444454544443
No 47
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=100.00 E-value=3.6e-36 Score=282.47 Aligned_cols=342 Identities=25% Similarity=0.423 Sum_probs=262.4
Q ss_pred HHhhhchhhhhcch-hhhhhcCCChhhHHHHHHHHHHHHHHhhhhhhhhhccccchHHHHHHHHHHHHHHhhhhhccccc
Q 012902 57 FIVFGQVNMSIAIL-PMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLG 135 (454)
Q Consensus 57 ~~~~~~~~~~~~~~-~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~l~~~~~~~~ 135 (454)
...++.....+..| .+.+++|.|+.+.+++.+++.++..+++++.|+++||+|||+++..+.++.+++.++..+++ |
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~--~ 84 (352)
T PF07690_consen 7 LSGFGFSIISPALPLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALGSLLLAFAS--N 84 (352)
T ss_dssp HHHHHHHHHHHHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHHHHHC--C
T ss_pred HHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhHHHHhhhhh--h
Confidence 56777778888889 89999999999999999999999999999999999999999999999999999977777767 8
Q ss_pred HHHHHHHHHHHHhhcccchhhhhHHHhhhcCccchHHHHHHHHhhHHHHHHhHHhHHHHHhhccCcchhHHHHhHHHHHH
Q 012902 136 LPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVW 215 (454)
Q Consensus 136 ~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~ig~~l~~~l~~~~gwr~~f~~~~~~~~~~ 215 (454)
.+.+++.|++.|++.+...+...+++.|++|+|+|++++++.+...++|..++|.+++.+.++.+||+.|++.+++.++.
T Consensus 85 ~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~ 164 (352)
T PF07690_consen 85 FWLLLIARFLLGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISYFGWRWAFLISAILSLIA 164 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHCHHCCHHHHHHHHHHHH
T ss_pred HHHHhhhccccccccccccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhhhccccccccccccchhhhh
Confidence 88999999999999999999999999999999999999999999999999999999999999899999999999999888
Q ss_pred HHHHHHhcCCCCCCCCCCChhhhhhhhhccccCCCCCCc-chhHhhcCcchHHHHHHHHHHHHHHHHHHhhHHHHHHHHh
Q 012902 216 FTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTI-PWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVL 294 (454)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 294 (454)
.++.....+++++++++.++++++ ++++.+.. .++.++++|.+|......++..+.......+.|.|+++.+
T Consensus 165 ~il~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 237 (352)
T PF07690_consen 165 AILFILFLPEPPPPRERESPKESE-------SKKPKPLKPGFKSLFKNPVLWILLIAFFLFFFVFSGFSFFLPLYLQEVL 237 (352)
T ss_dssp HHHHHCCC---STTTT--SSTTTT---------HHHCCCH-CTHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
T ss_pred hhhHhhhhhhcccccccccccccc-------cccccccccccccccccchhhhhhhhhhHHHHHHHHhhcccchhhhhcc
Confidence 775445555544433322222210 00001122 3667788888876666666666788889999999988888
Q ss_pred CCc-ccchhhHhHHHHHHHHHHHHHHHHHhhhhhhcCccchhhHHHHHHHHHHHHHHHHHHhhccCh-hHHHHHHHHHHH
Q 012902 295 HFN-LTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDS-PAMAVLCMACSQ 372 (454)
Q Consensus 295 g~s-~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 372 (454)
|.+ ..+.+.......+..++++++.+++.||+++++. ..............+......++ .+......+.+.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 311 (352)
T PF07690_consen 238 GFSGPSQAGLLFSIFGIVGIIGSLLAGRLSDRFGRRRR------LLIAILLLILGALGLLLLPFSSSPVWLIIALFLIGF 311 (352)
T ss_dssp HCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHH------HHHHHHHHHHHHHHHCCSHHHCHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHH------HHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 999 7899999999999999999999999999997632 12222222222222222222222 333444455555
Q ss_pred hhhhhhcchhhhhhcccccccchhHHHHHHHHHHHHHHHHH
Q 012902 373 GTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGT 413 (454)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~ 413 (454)
+.+...........+..|++++|++.|+.+...++++.++|
T Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~igP 352 (352)
T PF07690_consen 312 GFGIVFPILFSLIQELVPPEYRGTAFGLFNSIGSLGGIIGP 352 (352)
T ss_dssp HHHHHCHHHHHHHHCCCHTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 44444444444455666678999999999999999999987
No 48
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=100.00 E-value=5.8e-35 Score=275.63 Aligned_cols=352 Identities=16% Similarity=0.116 Sum_probs=265.6
Q ss_pred HHhhhchhhhhcchhhhhhcCCChhhHHHHHHHHHHHHHHhhhhhhhhhccccchHHHHHHHHHHHHHHhhhhhccc---
Q 012902 57 FIVFGQVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAK--- 133 (454)
Q Consensus 57 ~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~l~~~~~~--- 133 (454)
+..+......+.+|.+.++++.++.+.+++.+++.++..+++++.|+++||+|||+++..+.++.+++.++.++++.
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (365)
T TIGR00900 10 ISLIGTAITQVALPLYVLAGTGSASVLSLAALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVLVAVLPFVALLGG 89 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 46667777888889999999999999999999999999999999999999999999999999988888777765541
Q ss_pred ccHHHHHHHHHHHHhhcccchhhhhHHHhhhcCccchHHHHHHHHhhHHHHHHhHHhHHHHHhhccCcchhHHHHhHHHH
Q 012902 134 LGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGT 213 (454)
Q Consensus 134 ~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~ig~~l~~~l~~~~gwr~~f~~~~~~~~ 213 (454)
.+++.+++.|+++|++.+...+...+++.|++|+|+|++++++.+....+|..+||.+++.+.+..|||+.|++.++..+
T Consensus 90 ~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~ 169 (365)
T TIGR00900 90 LNIWQVYVLAGILAIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYATLGIKWAIWVDAVGFA 169 (365)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 16889999999999999999999999999999999999999999999999999999999999999999999999877666
Q ss_pred HHHHHHHHhcCCCCCCCCCCChhhhhhhhhccccCCCCCCcchhHhhcCcchHHHHHHHHHHHHHHHHHH-hhHHHHHHH
Q 012902 214 VWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILL-TWMPTYYNQ 292 (454)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~ 292 (454)
+..+......+++++++++.+.+++.. ++....++..+|+|.++...+..++......... .+.|.+.++
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (365)
T TIGR00900 170 ISALLIVSVRIPELAASEIQALSNAVL---------RDTREGIKFVLKNPLLRTLLLLALLFNLVFAPAIVALFPYVQSK 240 (365)
T ss_pred HHHHHHHhcccccCCCccccccchhHH---------HHHHhHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 655444433222221111111000000 0012345667889999988888777777777666 888999988
Q ss_pred HhCCcccchhhHhHHHHHHHHHHHHHHHHHhhhhhhcCccchhhHHHHHHHHHHHHHHHHHHhhccChhHHHHHHHHHHH
Q 012902 293 VLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLCMACSQ 372 (454)
Q Consensus 293 ~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (454)
.+|.++.+.+.......++.+++.+..+++.||.++|+. ....................+.....+...+.+.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 313 (365)
T TIGR00900 241 YLGRGSTHYGWVLAAFGLGALLGALLLGLLGRYFKRMAL-------MTGAIFVIGLAILVVGLTPPNFPLFLVLWFAIGV 313 (365)
T ss_pred HhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhHH-------HHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHH
Confidence 789999999999999999999999999999999998842 2211111111111111111112222333344444
Q ss_pred hhhhhhcchhhhhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHhccCC
Q 012902 373 GTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGS 424 (454)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g 424 (454)
+.............+..|+++|+++.|+.+...+++..++|.+.|.+.|+.|
T Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~g~l~~~~g 365 (365)
T TIGR00900 314 GYGPINVPQGTLLQRRVPAELLGRVFGAQFSLSHAAWPLGLILAGPLADHLG 365 (365)
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 4444333334444566677899999999999999999999999999998643
No 49
>PRK03893 putative sialic acid transporter; Provisional
Probab=100.00 E-value=3.9e-35 Score=288.15 Aligned_cols=388 Identities=14% Similarity=0.107 Sum_probs=265.3
Q ss_pred chHHHHHHHHHHHHHHHHhhhchhhhhcchhhhhhcCCChhhHHHHHHHHHHHHHHhhhhhhhhhccccchHHHHHHHHH
Q 012902 41 SYKQIISLCVGNFEQIFIVFGQVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVW 120 (454)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~ 120 (454)
.+++.+..+.+.++ .+.++....++..|.+.+++|.|+.+.+++.+.+.++..+++++.|+++||+|||+.+..+.++
T Consensus 17 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~ 94 (496)
T PRK03893 17 AQWKAFSAAWLGYL--LDGFDFVLITLVLTEVQGEFGLTTVQAASLISAAFISRWFGGLLLGAMGDRYGRRLAMVISIVL 94 (496)
T ss_pred HHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHH
Confidence 34555666666666 7889999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhhhcccccHHHHHHHHHHHHhhcccchhhhhHHHhhhcCccchHHHHHHHHhhHHHHHHhHHhHHHHHhhccC
Q 012902 121 WSIATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFG 200 (454)
Q Consensus 121 ~~~~~~l~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~ig~~l~~~l~~~~g 200 (454)
.+++.+++++++ |++.+++.|++.|++.+...+....++.|++|+|+|++++++...+..+|..+++.+.+.+.++++
T Consensus 95 ~~~~~~~~~~~~--~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~ 172 (496)
T PRK03893 95 FSVGTLACGFAP--GYWTLFIARLVIGMGMAGEYGSSATYVIESWPKHLRNKASGFLISGFSIGAVVAAQVYSLVVPVWG 172 (496)
T ss_pred HHHHHHHHHHHh--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCC
Confidence 999999999999 999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cchhHHHHhHHHHHHHHHHHHhcCCCCCCCCCCChhhh-hhhhhccccCCCCCCcch----------hHhh---------
Q 012902 201 WPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEK-KLIVSSCASKEPVKTIPW----------GLIL--------- 260 (454)
Q Consensus 201 wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~----------~~~~--------- 260 (454)
||+.|++.....++ .++.....||+++.+++.++++. +........+++. .... ...+
T Consensus 173 w~~~f~~~~~~~~~-~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (496)
T PRK03893 173 WRALFFIGILPIIF-ALWLRKNLPEAEDWKEKHAGKAPVRTMVDILYRGEHR-IINILLTLAAAAALWFCFAGNLQNAAI 250 (496)
T ss_pred HHHHHHHHHHHHHH-HHHHHHhCCCchhhhhhccccccchhHHHHHhcchhH-HHHHHHHHHHHHHHHHHHHhhhcchhH
Confidence 99999875443333 23333334544321111000000 0000000000000 0000 0000
Q ss_pred -------------------c---CcchHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCcccchhhHhHHHHHHHHHHHHH
Q 012902 261 -------------------S---KPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANL 318 (454)
Q Consensus 261 -------------------~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~ 318 (454)
+ .+.........+...........++|.|+++.+|+++.+++.+.+...++.++++++
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~~~~~~g~~~~~~~~~~~~g~~~ 330 (496)
T PRK03893 251 VAVLGLLCAAIFISFMVQSSGKRWPTGVMLMVVVLFAFLYSWPIQALLPTYLKTDLGYDPHTVANVLFFSGFGAAVGCCV 330 (496)
T ss_pred HHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHhccchHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 0 000000000111111111234578899998778999999999999999999999999
Q ss_pred HHHHhhhhhhcCccchhhHHHHHHHHHHHHHHHHHHhhccChhHHHHHHHH-HHHhhhhhhcchhhhhhcccccccchhH
Q 012902 319 GGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLCMA-CSQGTDAFSQSGLYSNHQDIAPRYSGVL 397 (454)
Q Consensus 319 ~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (454)
.|++.||+++|+.. ......................+....... .+....+..........+..++++|+++
T Consensus 331 ~g~l~dr~g~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 403 (496)
T PRK03893 331 GGFLGDWLGTRKAY-------VCSLLISQLLIIPVFAIGGANVWVLGLLLFFQQMLGQGISGLLPKLIGGYFDTEQRAAG 403 (496)
T ss_pred HHHHHHHhcchHHH-------HHHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHhcccchhhHHHHHhhCCHHHhhcc
Confidence 99999999988432 211111111111111111222222222222 1222222222222233455566889999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHH
Q 012902 398 LGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTA 441 (454)
Q Consensus 398 ~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~ 441 (454)
+|+.+...++|+.++|.+.|.+.|..|+...+...+....+..+
T Consensus 404 ~~~~~~~~~~g~~lgp~l~g~l~~~~g~~~~~~~~~~~~~~~~~ 447 (496)
T PRK03893 404 LGFTYNVGALGGALAPILGALIAQRLDLGTALASLSFSLTFVVI 447 (496)
T ss_pred cchhhhhhhHHHHHHHHHHHHHhccCChHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999998887665554444333
No 50
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=100.00 E-value=4.8e-34 Score=271.95 Aligned_cols=356 Identities=15% Similarity=0.134 Sum_probs=268.2
Q ss_pred HHHHHHHHHHHHHHHHhhhchhhhhcchhhhhhcCCChhhHHHHHHHHHHHHHHhhhhhhhhhccccchHHHHHHHHHHH
Q 012902 43 KQIISLCVGNFEQIFIVFGQVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWS 122 (454)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~ 122 (454)
++.+.+...... ...+......+.+|.+.+++|.|+.+.+++.+.+.++..++++++|+++||+|||+++..+.++..
T Consensus 7 ~~~l~~~~~~~~--~~~~~~~~~~p~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~~~~~~~~~ 84 (394)
T PRK11652 7 VNLLFMLVLLVA--VGQMAQTIYVPAIADMARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRPVILVGMSIFI 84 (394)
T ss_pred HHHHHHHHHHHH--HHHHHHHHHhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHH
Confidence 344444444444 455666777888999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhhhcccccHHHHHHHHHHHHhhcccchhhhhHHHhhhcCccchHHHHHHHHhhHHHHHHhHHhHHHHHhhccCcc
Q 012902 123 IATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWP 202 (454)
Q Consensus 123 ~~~~l~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~ig~~l~~~l~~~~gwr 202 (454)
++.+++.+++ +++.+++.|++.|++.+...+....+..|.+++++|+++.+..+.+..+|..++|.+++.+.+..|||
T Consensus 85 ~~~~~~~~~~--~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~ 162 (394)
T PRK11652 85 LGTLVALFAH--SLTVLIAASAIQGLGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTTLFGWR 162 (394)
T ss_pred HHHHHHHHHc--cHHHHHHHHHHHHhhhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChH
Confidence 9999999998 99999999999999998888888889999999999999999999999999999999999999989999
Q ss_pred hhHHHHhHHHHHHHHHHHHhcCCCCCCCCCCChhhhhhhhhccccCCCCCCcchhHhhcCcchHHHHHHHHHHHHHHHHH
Q 012902 203 SVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFIL 282 (454)
Q Consensus 203 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (454)
+.|++.++..++..++..+..||+++++++. ++ ...++++.+|+|+++...+..+........+
T Consensus 163 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (394)
T PRK11652 163 ACYLFLLLLGAGVTFSMARWMPETRPADARR--TR--------------VLASYRTLLSNRRFNCYLLMLIGTLAGIAVF 226 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCccCccccch--hH--------------HHHHHHHHHcChHHHHHHHHHHHHHHHHHHH
Confidence 9999988877766555555666654332111 11 0234566788888887666666666666666
Q ss_pred HhhHHHHHHHHhCCcccchhhHhHHHHHHHHHHHHHHHHHhhhhhhcCccchhhHHHHHHHHHHHHHHHHHHh--hccCh
Q 012902 283 LTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQL--SHVDS 360 (454)
Q Consensus 283 ~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 360 (454)
..+.+.++++.+|.++.+.++......++.+++..+.+++.||.+++. ................. .....
T Consensus 227 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~ 298 (394)
T PRK11652 227 EACSGVLMGAVLGLSSMTVSILFILPIPAAFFGAWFAGRPNKRFSTLM--------WQSVICCLLAGLLMWIPGWFGVMN 298 (394)
T ss_pred HHhChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHhcccc
Confidence 777888999888999999999888888888888899999999988431 11111111111111111 11122
Q ss_pred hHHHHHHHHHHHhhhhhhcchhhhhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHhccCCch
Q 012902 361 PAMAVLCMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWD 426 (454)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~ 426 (454)
.+.......+.....+...+.......+..|+++|++.++.+...++|+.+++.+.+.+.+...+.
T Consensus 299 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~ 364 (394)
T PRK11652 299 VWTLLVPAALFFFGAGMLFPLATSGAMEPFPYLAGTAGALLGGLQNIGSGLAALLSAMLPQTGQFS 364 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHHHHccCCchHH
Confidence 222233223333333334455555555556788999999999999999999999999887664443
No 51
>PRK10489 enterobactin exporter EntS; Provisional
Probab=100.00 E-value=4.7e-35 Score=280.84 Aligned_cols=363 Identities=15% Similarity=0.089 Sum_probs=266.3
Q ss_pred HhhhchhhhhcchhhhhhcCCChhhHHHHHHHHHHHHHHhhhhhhhhhccccchHHHHHHHHHHHHHHhhhhh-----cc
Q 012902 58 IVFGQVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPV-----AA 132 (454)
Q Consensus 58 ~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~l~~~-----~~ 132 (454)
..+......+.+|.+.++++.++.+.|++.+.+.++..+++++.|+++||+|||+++..+.++.+++.+..+. .+
T Consensus 29 ~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 108 (417)
T PRK10489 29 SIFGLGLLGVAVPVQIQMMTGSTLQVGLSVTLTGGAMFIGLMVGGVLADRYDRKKLILLARGTCGLGFIGLALNAFLPEP 108 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhcCCceEEEehHHHHHHHHHHHHHHHHcCCC
Confidence 4445566777888888899999999999999999999999999999999999999999888887777665442 45
Q ss_pred cccHHHHHHHHHHHHhhcccchhhhhHHHhhhcCccchHHHHHHHHhhHHHHHHhHHhHHHHHhhccCcchhHHHHhHHH
Q 012902 133 KLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLG 212 (454)
Q Consensus 133 ~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~ig~~l~~~l~~~~gwr~~f~~~~~~~ 212 (454)
+++.+++.|+++|++.+...+...+++.|++|+++|+++.++.....++|..+||.+++.+.+..+|++.|++.++..
T Consensus 109 --~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~g~l~~~~~~~~~~~~~~~~~ 186 (417)
T PRK10489 109 --SLLAIYLLGLWDGFFGSLGVTALLAATPALVGRENLMQAGAITMLTVRLGSVISPALGGLLIAAGGVAWNYGLAAAGT 186 (417)
T ss_pred --cHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCHHHHHHHHHHHHHHHhHHHHhHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 788999999999999888888899999999999999999999999999999999999999999889999999887776
Q ss_pred HHHHHHHHHhcCCCCCCCCCCChhhhhhhhhccccCCCCCCcchhHhhcCcchHHHHHHHHHHHHHHHHHHhhHHHHHHH
Q 012902 213 TVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQ 292 (454)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 292 (454)
++..++. ...|++++++++.++..+ .....++..+++|.++...+..++.. .......++|.|+++
T Consensus 187 ~~~~~~~-~~l~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~p~~~~~ 252 (417)
T PRK10489 187 FITLLPL-LRLPALPPPPQPREHPLR------------SLLAGFRFLLASPVVGGIALLGGLLT-MASAVRVLYPALADE 252 (417)
T ss_pred HHHHHHH-HhCCCCCCCCcccccchH------------HHHHHHHHHHcChHHHHHHHHHHHHH-HHHhHHHhhHHHHHh
Confidence 6654443 345554332211110000 00223455778888776655554433 345677889999999
Q ss_pred HhCCcccchhhHhHHHHHHHHHHHHHHHHHhhhhhhcCccchhhHHHHHHHHHHHHHHHHHHhhccChhHHH-HHHHHHH
Q 012902 293 VLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMA-VLCMACS 371 (454)
Q Consensus 293 ~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 371 (454)
.+|.++.+.+.+.....++.+++.++.+++.||.++++. .. .+..............++.+.. ....+.+
T Consensus 253 ~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~~~~~~-------l~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 323 (417)
T PRK10489 253 VWQMGAAQIGLLYAAVPLGAALGALTSGWLAHSARPGLL-------ML--LSTLGSFLAVGLFGLMPMWILAVLCLALFG 323 (417)
T ss_pred ccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhccCcchH-------HH--HHHHHHHHHHHHHHccchHHHHHHHHHHHH
Confidence 889999999999999999999999999999998665532 11 1111122222222222333322 2233333
Q ss_pred Hhhhhhhcchhhhhh-cccccccchhHHHHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHHHHh
Q 012902 372 QGTDAFSQSGLYSNH-QDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWNLF 446 (454)
Q Consensus 372 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 446 (454)
.+ .....+...... +..|++.||+++|+++...++|..+||.+.|.+.|..|+...+...+++.++..++....
T Consensus 324 ~~-~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 398 (417)
T PRK10489 324 YL-SAISSLLQYTLLQTQTPDEMLGRINGLWTAQNVTGDAIGAALLGGLGAMMTPVASASASGFGLLIIGVLLLLV 398 (417)
T ss_pred HH-HHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHh
Confidence 32 223333333443 445667899999999999999999999999999999898888887776666554444443
No 52
>PRK11043 putative transporter; Provisional
Probab=100.00 E-value=4.3e-34 Score=272.90 Aligned_cols=348 Identities=15% Similarity=0.134 Sum_probs=263.1
Q ss_pred HhhhchhhhhcchhhhhhcCCChhhHHHHHHHHHHHHHHhhhhhhhhhccccchHHHHHHHHHHHHHHhhhhhcccccHH
Q 012902 58 IVFGQVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLP 137 (454)
Q Consensus 58 ~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~l~~~~~~~~~~ 137 (454)
..+....+.+..|++.+++|.++++.+++.+++.++..++++++|+++||+|||+++..+.++..++.+++++++ +++
T Consensus 18 ~~~~~~~~~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~--~~~ 95 (401)
T PRK11043 18 GFLATDMYLPAFKAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALGSLGMLWVE--SAA 95 (401)
T ss_pred HHHHHHHHHhhHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHHHHHHHHhc--CHH
Confidence 556667778888999999999999999999999999999999999999999999999999999999999999999 999
Q ss_pred HHHHHHHHHHhhcccchhhhhHHHhhhcCccchHHHHHHHHhhHHHHHHhHHhHHHHHhhccCcchhHHHHhHHHHHHHH
Q 012902 138 FLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFT 217 (454)
Q Consensus 138 ~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~ig~~l~~~l~~~~gwr~~f~~~~~~~~~~~~ 217 (454)
.+++.|+++|++.+...+...+++.|++|++++++..+.......+|..++|.+++.+.+++|||+.|++.+.+.++..+
T Consensus 96 ~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~~~~~~~~~~~~~~ 175 (401)
T PRK11043 96 QLLVLRFVQAVGVCSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLNHFGWQAIFATLFAITLLLIL 175 (401)
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHH
Confidence 99999999999988888888899999999999999999999999999999999999999999999999998888877665
Q ss_pred HHHHhcCCCCCCCCCCChhhhhhhhhccccCCCCCCcchhHhhcCcchHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCc
Q 012902 218 VWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFN 297 (454)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s 297 (454)
..+.. +|+++++++ ++ ++.++++.+|+|+++...+...+....+..+..+.|.++++ .|++
T Consensus 176 ~~~~~-~~~~~~~~~----~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s 236 (401)
T PRK11043 176 PTLRL-KPSKKARKQ----SQ-------------DALTFKQLLKSKTYLGNVLIFAACSAAFFAWLTGSPFILEQ-MGYS 236 (401)
T ss_pred HHHHc-CCCCCcccc----ch-------------HHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHhHHHHHH-cCCC
Confidence 55443 333221110 00 02345678888888876666666666667777889998877 6999
Q ss_pred ccchhhHhHHHHHHHHHHHHHHHHHhhhhhhcCccchhhHHHHHHHHHHHHHHHHHHhhccChhHHHHH-HHHHHHhhhh
Q 012902 298 LTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVL-CMACSQGTDA 376 (454)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 376 (454)
+.+.++......++.+++++..+++.||+++|+..... .....+.............+..+.... ....+.+.+
T Consensus 237 ~~~~g~~~~~~~~~~~~g~~~~~~l~~r~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 311 (401)
T PRK11043 237 PADIGLSYVPQTIAFLVGGYGCRAALQKWGGEQLLPWL----LVLFAVSVIAIWLASLLSHPSLVPLLIPFCVMAAANG- 311 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHH----HHHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHH-
Confidence 99999988888888999999999999999988532211 111111111111111111222222222 223333333
Q ss_pred hhcchhhhhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHhccCCchhHHHH
Q 012902 377 FSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKV 431 (454)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~ 431 (454)
...+.......+..|+++|++.|+.+.....++..++.+.|.+.|.......+..
T Consensus 312 ~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~ 366 (401)
T PRK11043 312 AIYPIVVAQALRPFPQATGKAAALQNTLQLGLCFLASLLVSALISTPLLTTGSVM 366 (401)
T ss_pred HHHHHHHHHHhhhCcccChHHHHHHHHHHHHHHHHHHHHHHHccCCChhHHHHHH
Confidence 3334444443344567899999999999999999999999999886555544433
No 53
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=100.00 E-value=3e-34 Score=281.08 Aligned_cols=395 Identities=14% Similarity=0.144 Sum_probs=263.4
Q ss_pred HHHHHHHHHHHHHHHHhhhchhhhhcchhhhhhc-----CCChhhHHHHHHHHHHHHHHhhhhhhhhhccccchHHHHHH
Q 012902 43 KQIISLCVGNFEQIFIVFGQVNMSIAILPMSAEF-----NWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFG 117 (454)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~-----~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~ 117 (454)
+.+..++.++.+ .+++|....+.+.|.+.+++ +.++.+.+++.+.+.++..++++++|+++||+|||+++..+
T Consensus 15 ~~~~~~~~~~~~--~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~ig~~~~g~l~d~~Grr~~~~~~ 92 (502)
T TIGR00887 15 FRAIVIAGVGFF--TDSYDLFCISLVTKMLGYVYYHGKGPLPSSVSAAVNGSASIGTLAGQLFFGWLADKLGRKRVYGME 92 (502)
T ss_pred HHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHhccCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHH
Confidence 344444445555 79999999999988877642 34566789999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhhhccccc------HHHHHHHHHHHHhhcccchhhhhHHHhhhcCccchHHHHHHHHhhHHHHHHhHHhH
Q 012902 118 VVWWSIATALTPVAAKLG------LPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAF 191 (454)
Q Consensus 118 ~~~~~~~~~l~~~~~~~~------~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~ig~~l 191 (454)
.++..++.+++++++ + ++.++++|+++|++.|...+....+++|++|+++|++++++.+....+|..+++.+
T Consensus 93 ~~~~~v~~~~~~~~~--~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~~~ 170 (502)
T TIGR00887 93 LIIMIIATVASGLSP--GSSPKSVMATLCFWRFWLGVGIGGDYPLSAIITSEFATKKWRGAMMAAVFAMQGFGILAGAIV 170 (502)
T ss_pred HHHHHHHHHHHHHcc--CcccchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999998887 5 78899999999999999999999999999999999999999999999999999988
Q ss_pred HHHHhh-----------------------ccCcchhHHHHhHHHHHHHHHHHHhcCCCCCCC---CCCChhhhhhhh---
Q 012902 192 SPFLIH-----------------------RFGWPSVFYSFGSLGTVWFTVWLSKAHSSPAED---PQLRPAEKKLIV--- 242 (454)
Q Consensus 192 ~~~l~~-----------------------~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~--- 242 (454)
+..+.. .++||+.|.+.++++++. .+..++.||+|+.. ++.+++..+...
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~~~~~~ip~~i~-~~~~~~lpESpr~l~~~~~~~~~a~~~~~~~~ 249 (502)
T TIGR00887 171 ALIVLAGFKHSLEAAADEASCTGSCVPAVDYMWRILIGFGAVPALLA-LYFRLTIPETPRYTADVAKDVEQAASDMSAVL 249 (502)
T ss_pred HHHHHHHhccccccccccccccccccchhcccHHHHHHHHHHHHHHH-HHHHHhCCCCHHHHHHhCcchHHHHHHHHHHh
Confidence 876532 247999998877766654 44456789998742 111111110000
Q ss_pred h-----cccc------CCCCCCcchhHhhcC---cchHH----HHHHHHHHHHHHHHHHhhHHHHHHHHhCCcccchhh-
Q 012902 243 S-----SCAS------KEPVKTIPWGLILSK---PPVWA----LIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGL- 303 (454)
Q Consensus 243 ~-----~~~~------~~~~~~~~~~~~~~~---~~~~~----~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~- 303 (454)
+ +.++ +++..+.++++++++ ++.+. .....+.....+++...+.|.++++ .|+++.+.+.
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~p~i~~~-~G~~~~~~~~~ 328 (502)
T TIGR00887 250 QVKIEAEPDEVEKASTAVEVPKASWSDFFTHFFKWRHGKHLLGTAGSWFLLDIAFYGVNLNQKVILSA-IGYSPPAATNN 328 (502)
T ss_pred ccccccCcccccchhccccchhhhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHccccccHHHHHH-HcCCCCccchh
Confidence 0 0000 000012356666653 22211 2223344445566777788999976 5887654321
Q ss_pred -----------HhHHHHHHHHHHHHHHHHHhhhhhhcCccchhhHHHHHHHHHHHHHHHHHHh-h-ccChhHHHHHHHHH
Q 012902 304 -----------FCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQL-S-HVDSPAMAVLCMAC 370 (454)
Q Consensus 304 -----------~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~ 370 (454)
......++.+++.++.++++||+|||+....+ ............. . ..+...........
T Consensus 329 ~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~gRR~~l~~~-------~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 401 (502)
T TIGR00887 329 AYEELYKTAVGNLIIALAGTVPGYWVTVFLVDIIGRKPIQLMG-------FFILTVLFFVLGFAYNHLSTHGFLAIYVLA 401 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhHHHHH-------HHHHHHHHHHHHHHHHhcchhHHHHHHHHH
Confidence 12334456677888999999999999543221 1111111111111 1 11111111112122
Q ss_pred HHhhhhhhcchhhhhhccccc-ccchhHHHHHHHHHHHHHHHHHHHHHHHhcc----------CCchhHHHHHHHHHHHH
Q 012902 371 SQGTDAFSQSGLYSNHQDIAP-RYSGVLLGLSNTAGVLAGVFGTAATGYILQH----------GSWDDVFKVSVGLYLVG 439 (454)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~----------~g~~~~~~~~~~~~~~~ 439 (454)
..+......+....+..|..| +.|+++.|+.+....++++++|.+.+.+.|. .++...|++.+++.+++
T Consensus 402 ~~~~~~~~~~~~~~~~~E~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 481 (502)
T TIGR00887 402 QFFANFGPNATTFIVPGEVFPTRYRSTAHGISAASGKAGAIIGQFGFLYLAQHGDPTKGYPTGIWMGHVLEIFALFMFLG 481 (502)
T ss_pred HHHHhcCCCchhhhhhhccCchhHHHHHHHHHHHHhhhHHHHHHHHhhhhhccccccccccccccchHHHHHHHHHHHHH
Confidence 222222223334444445555 7899999999999999999999999999984 24456777777777766
Q ss_pred HHHHHHhccCCc
Q 012902 440 TAVWNLFSTGEK 451 (454)
Q Consensus 440 ~~~~~~~~~~~~ 451 (454)
.+..+ +.+|++
T Consensus 482 ~i~~~-~lpEt~ 492 (502)
T TIGR00887 482 ILFTL-LIPETK 492 (502)
T ss_pred HHHhe-EeccCC
Confidence 55543 334443
No 54
>TIGR00895 2A0115 benzoate transport.
Probab=100.00 E-value=1.4e-34 Score=276.28 Aligned_cols=366 Identities=20% Similarity=0.266 Sum_probs=267.7
Q ss_pred chHHHHHHHHHHHHHHHHhhhchhhhhcchhhhhhcCCChhhHHHHHHHHHHHHHHhhhhhhhhhccccchHHHHHHHHH
Q 012902 41 SYKQIISLCVGNFEQIFIVFGQVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVW 120 (454)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~ 120 (454)
++++.+..+....+ ..+++....++..|.+.+++|.++.+.+++.+.+.++..++.++.|+++||+|||+.+..+.++
T Consensus 14 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~ 91 (398)
T TIGR00895 14 YQWRAIILSFLIML--MDGYDLAAMGFAAPAISAEWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRIGRKRVLLWSILL 91 (398)
T ss_pred hHHHHHHHHHHHHH--HHHHHHHHHHhhHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhHHHHHHHHHH
Confidence 34455555555555 6777788888899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhhhcccccHHHHHHHHHHHHhhcccchhhhhHHHhhhcCccchHHHHHHHHhhHHHHHHhHHhHHHHHhhccC
Q 012902 121 WSIATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFG 200 (454)
Q Consensus 121 ~~~~~~l~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~ig~~l~~~l~~~~g 200 (454)
.+++.+++.+++ +++.+++.|++.|++.+...+...+++.|++|+++|++++++...+..+|..+++.+++.+.+..|
T Consensus 92 ~~~~~~~~~~~~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g 169 (398)
T TIGR00895 92 FSVFTLLCALAT--NVTQLLILRFLAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWLIPVFG 169 (398)
T ss_pred HHHHHHHHHHcc--chHHHHHHHHHHhcccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHHhhccc
Confidence 999999999999 999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cchhHHHHhHHHHHHHHHHHHhcCCCCCCCCCCChhhhhhh----hh----c-------cccCCCCCCcchhHhhcC---
Q 012902 201 WPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLI----VS----S-------CASKEPVKTIPWGLILSK--- 262 (454)
Q Consensus 201 wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~----~-------~~~~~~~~~~~~~~~~~~--- 262 (454)
||+.|++.+++.++..++.....||+++...+.++++.... .. + ++++++..+...+..+++
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (398)
T TIGR00895 170 WRSLFYVGGIAPLLLLLLLMRFLPESIDFLVSKRPETVRRIVNAIAPQMQAEAQSALPEQKATQGTKRSVFKALFQGKTA 249 (398)
T ss_pred ceeehhhhhhHHHHHHHHHHHhCCCCChHHHhcCHHHHHHHHHHHHHhccccccccccccccccchhhHHHHHHhcchhH
Confidence 99999998777777666666667776542211111110000 00 0 000000011112223332
Q ss_pred cchHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCcccchhhHhHHHHHHHHHHHHHHHHHhhhhhhcCccchhhHHHHHH
Q 012902 263 PPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQS 342 (454)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~ 342 (454)
+..+...+..++..........+.|.+.+ ..|.++.+.+.......++.++++++.+++.||+++|+. .. .
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-------~~-~ 320 (398)
T TIGR00895 250 RITVLLWLLYFMLLVGVYFLTNWLPKLMV-ELGFSLSLAATGGALFNFGGVIGSIIFGWLADRLGPRVT-------AL-L 320 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHH-------HH-H
Confidence 23344445555666667777888885554 479999999999999999999999999999999998721 11 1
Q ss_pred HHHHHHHHHHHHhhccChhHHHHHHHHHHHhhhhhhcchhhhhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHH
Q 012902 343 IGFLGPAFFLTQLSHVDSPAMAVLCMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYI 419 (454)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l 419 (454)
................+........++.+.+.+...........+..|+++|+++.|+.+...++|..++|.+.|.+
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~G~l 397 (398)
T TIGR00895 321 LLLGAVFAVLVGSTLFSPTLLLLLGAIAGFFVNGGQSGLYALMALFYPTAIRATGVGWAIGIGRLGAIIGPILAGYL 397 (398)
T ss_pred HHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHhHHhc
Confidence 11111111111111223333344444445444444444444445556678999999999999999999999999976
No 55
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=100.00 E-value=5.6e-34 Score=270.17 Aligned_cols=363 Identities=13% Similarity=0.023 Sum_probs=263.7
Q ss_pred HHhhhchhhhhcchhhhhhcCCChhhHHHHHHHHHHHHHHhhhhhhhhhccccchHHHHHHHHHHHHHHhhhhhcccccH
Q 012902 57 FIVFGQVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGL 136 (454)
Q Consensus 57 ~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~l~~~~~~~~~ 136 (454)
+..++........+.+.+|++.++.+.+++.+.+.+++.++++++|+++||+|||+++..+.++.+++++++++++ +.
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~~~~~~~~~~~~~--~~ 91 (393)
T PRK11195 14 FSALADNALLFAAIALLKELHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKGRVMFIANGIKLLGCLLMLFGI--HP 91 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCchhhHHHHHHHHHHHHHHHHHH--HH
Confidence 4555444455666677889999999999999999999999999999999999999999999999999998888877 64
Q ss_pred HHHHHHHHHHHhhcccchhhhhHHHhhhcCccchHHHHHHHHhhHHHHHHhHHhHHHHHhhccCcchhHHHHhHHHHHHH
Q 012902 137 PFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWF 216 (454)
Q Consensus 137 ~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~ig~~l~~~l~~~~gwr~~f~~~~~~~~~~~ 216 (454)
++.|+++|++.+...|...+++.|++|+|+|++++|+.+....+|.++||.+++.+.+. .|+..+.+.+...++.
T Consensus 92 ---~~~r~l~G~~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~~-~~~~~~~i~~~~~~~~- 166 (393)
T PRK11195 92 ---LLAYGLVGIGAAAYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGALADP-HAEAALAVCALIYLLA- 166 (393)
T ss_pred ---HHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHH-
Confidence 67899999999999999999999999999999999999999999999999999999885 4887777766554444
Q ss_pred HHHHHhcCCCCCCCCCCChhhhhhhhhccccCCCCCCcchhHhhcCcchHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCC
Q 012902 217 TVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHF 296 (454)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~ 296 (454)
.+..+..||+++++++.++++..... + ....++.++++|.++.......+...........+|.|+++.+|.
T Consensus 167 ~~~~~~l~~~~~~~~~~~~~~~~~~~-~-------~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~ 238 (393)
T PRK11195 167 ALFNLFIPRLGARRPGQSWNPIALLR-D-------FFHACRVLWRDKLGRFSLAGTTLFWGAGATLRFLVLAWAPVALGI 238 (393)
T ss_pred HHHHhcCCCCcccccccCCCHHHHHH-H-------HHHHHHHHHhCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 33345566654332211111110000 0 012245678888877666555555556666677788899988999
Q ss_pred cccchhhHhHHHHHHHHHHHHHHHHHhhhhhhcCccchhhHHHHHHHHHHHHHHHHHHhhccChhHHH-HHHHHHHHhhh
Q 012902 297 NLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMA-VLCMACSQGTD 375 (454)
Q Consensus 297 s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 375 (454)
++.+.|.......++.+++++..+++.||.++++... .. ... +.........++.+.. ....+.+.+.+
T Consensus 239 s~~~~G~~~~~~~~g~i~g~~~~~~l~~~~~~~~~~~-------~g--~~~-~~~~~~~~~~~~~~~~~~~~~~~G~~~g 308 (393)
T PRK11195 239 TLNQPAYLQAVVAIGIAVGAGAAARLVTLETVLRVLP-------AG--ILM-GLVVLLMALQHSLLPAYPLLILIGALGG 308 (393)
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchHH-------HH--HHH-HHHHHHHHHHhHHHHHHHHHHHHHHhhh
Confidence 9999999999999999999999999999888774322 11 111 1111111122233322 33334444444
Q ss_pred hhhcchhhhhhcccccc-c-chhHHHHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHHHHh
Q 012902 376 AFSQSGLYSNHQDIAPR-Y-SGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWNLF 446 (454)
Q Consensus 376 ~~~~~~~~~~~~~~~~~-~-~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 446 (454)
....+..... .+.+|+ . +|++.++.+..++++..++..+.+.+ +..|.+..+++.+...+.+..+...+
T Consensus 309 ~~~~~~~~~~-q~~~~~~~~~g~~~a~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (393)
T PRK11195 309 FFVVPMNALL-QHRGHVLVGAGHSIAVQNFNENLAMLLMLGLYSLL-VKLGVPVVAVIVGFGLLVALAMALLW 379 (393)
T ss_pred hhhhhHHHHH-HhhCcccccchhHHHHHhHHHHHHHHHHHHHHHHH-HHcCCCHHHHHHHHHHHHHHHHHHHH
Confidence 4444444443 445554 3 69999999999999999999999955 66788888887776666666555444
No 56
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=100.00 E-value=2.2e-33 Score=267.21 Aligned_cols=349 Identities=16% Similarity=0.128 Sum_probs=253.1
Q ss_pred HHhhhchhhhhcchhhhhhcCCChhhHHHHHHHHHHHHHHhhhhhhhhhccccchHHHHHHHHHHHHHHhhhhhcccccH
Q 012902 57 FIVFGQVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGL 136 (454)
Q Consensus 57 ~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~l~~~~~~~~~ 136 (454)
..........+.+|.+.+++|.|+.+.++..+.+.++..+++++.|+++||+|||+.+..+.++.+++.+++..++ ++
T Consensus 14 ~~~~~~~~~~~~lp~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i~~~~~~~~~--~~ 91 (392)
T PRK10473 14 LYPAGIDMYLVGLPRIAADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFIIASLLCSLAE--TS 91 (392)
T ss_pred HHHHHHHHHhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHHHHHHHHHHHhC--cH
Confidence 3555555666889999999999999999999999999999999999999999999999999999999999999999 99
Q ss_pred HHHHHHHHHHHhhcccchhhhhHHHhhhcCccchHHHHHHHHhhHHHHHHhHHhHHHHHhhccCcchhHHHHhHHHHHHH
Q 012902 137 PFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWF 216 (454)
Q Consensus 137 ~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~ig~~l~~~l~~~~gwr~~f~~~~~~~~~~~ 216 (454)
+.+++.|+++|++.+...+...+++.|++|+++|+++.++.+....+|..++|.+++.+.+..|||+.|++.+.+.++..
T Consensus 92 ~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~~g~~~~~~~~~~~~~i~~ 171 (392)
T PRK10473 92 SLFLAGRFLQGIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLKFPWQSLFYTMAAMGILVL 171 (392)
T ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHHHHHHHHHHHHHH
Confidence 99999999999999998999999999999999999999999999999999999999998888999999999988888777
Q ss_pred HHHHHhcCCCCCCCCCCChhhhhhhhhccccCCCCCCcchhHhhcCcchHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCC
Q 012902 217 TVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHF 296 (454)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~ 296 (454)
++.....||+++++++.++. .....++.+|+|+++...+...+.......+..+.|.++++.+|+
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 236 (392)
T PRK10473 172 LLSLFILKETRPARAPAASS---------------KPRENSESLLNRFFLSRLVITTLSVTVILTFVNTSPVLLMEQMGF 236 (392)
T ss_pred HHHHHHcCCCCCcccCCccc---------------hHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHcCC
Confidence 76666666654332111100 012234567888877666655555555556667778888888899
Q ss_pred cccchhhHhHHHHHHHHHHHHHHHHHhhhhhhcCccchhhHHHHHHHHHHHHHHHHHHhhccChhHHHHHHHHHHHhhhh
Q 012902 297 NLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLCMACSQGTDA 376 (454)
Q Consensus 297 s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (454)
++.+.+.......++.+++++..+++.||+++|+.. .................. ..........+...+...
T Consensus 237 ~~~~~~~~~~~~~~~~i~~~~~~~~l~~r~g~~~~~-------~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~g~~~ 308 (392)
T PRK10473 237 SRGEYAIIMALTAGVSMTVSFSTPFALGIFKPRTLM-------LTSQVLFLAAGITLALSP-SHAVSLFGITLICAGFSV 308 (392)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHH-------HHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999988432 222111111111111111 112222222222222222
Q ss_pred hhcchhhhhhccccc-ccchhHHHHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHH
Q 012902 377 FSQSGLYSNHQDIAP-RYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLY 436 (454)
Q Consensus 377 ~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~ 436 (454)
.. +.. ...+..| ++++ |.......++..+++.+.+++.+..|+.......+...
T Consensus 309 ~~-~~~--~~~~~~~~~~~~---g~~~~~~~~~~~~g~~~~~~l~~~~g~~~~~~~~~~~~ 363 (392)
T PRK10473 309 GF-GVA--MSQALGPFSLRA---GVASSTLGIAQVCGSSLWIWLAAVLGISAWNMLIGILI 363 (392)
T ss_pred Hh-HHH--HHHHhccCcccc---cHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHH
Confidence 21 111 1122223 3332 33344456777777888888887777765444444433
No 57
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=100.00 E-value=1.8e-33 Score=267.38 Aligned_cols=360 Identities=13% Similarity=0.099 Sum_probs=257.0
Q ss_pred hhchhhhhcch-hhhhhcCCChhhHHHHHHHHHHHHHHhhhhhhhhhccccchHHHHHHHHHHHHHHhhhhhcccccHHH
Q 012902 60 FGQVNMSIAIL-PMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPF 138 (454)
Q Consensus 60 ~~~~~~~~~~~-~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~l~~~~~~~~~~~ 138 (454)
.......+.++ ++++++|.|..++|++.+...+...+.+++.|+++||+|||+++..+.++.+++.+++.+++ +++.
T Consensus 24 ~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~~~~~~~~~~~~--~~~~ 101 (400)
T PRK11646 24 LGFFVVFPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFATMAIAH--EPWL 101 (400)
T ss_pred HHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHhc--cHHH
Confidence 33334444444 47889999999999999999999999999999999999999999999999999999999998 9999
Q ss_pred HHHHHHHHHhhcccchhhhhHHHhhhcCccchHHHHHHHHhhHHHHHHhHHhHHHHHhhccCcchhHHHHhHHHHHHHHH
Q 012902 139 LLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTV 218 (454)
Q Consensus 139 l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~ig~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~ 218 (454)
+++.|+++|++.+...+...+++.|++|+|+|++++|+.+...++|..+||.+++.+. .+|||+.|++.+...++..++
T Consensus 102 l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~-~~g~~~~f~~~~~~~~~~~i~ 180 (400)
T PRK11646 102 LWLSCILSGLGGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLL-QYDFRLVCATGAVLFVLAAAF 180 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHH
Confidence 9999999999998888999999999999999999999999999999999999999998 679999999988877766555
Q ss_pred HHHhcCCCCCCCCCCChhhhhhhhhccccCCCCCCcchhHhhcCcchHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCcc
Q 012902 219 WLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNL 298 (454)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~ 298 (454)
.....||.++++ .+++ ...+++..+++|+++...+..+...........++|.|+++..+ ++
T Consensus 181 ~~~~~~~~~~~~---~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-~~ 242 (400)
T PRK11646 181 NAWLLPAYKLST---VRTP--------------VREGMTRVLRDKRFVTYVLTLTGYYMLAVQVMLMLPIMVNDIAG-SP 242 (400)
T ss_pred HHHhCCcccccc---cchh--------------hHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHhhhhhHHhhcC-Cc
Confidence 555555432110 0000 02245667889988776665555444444456788999988644 77
Q ss_pred cchhhHhHHHHHHHHHHHHHHHHHhhh-hhhcCccchhhHHHHHHHHHHHHHHHHHHhhccChhHHH-HHHHHHHHhhhh
Q 012902 299 TESGLFCVLPWLTMAFSANLGGWIADT-LVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMA-VLCMACSQGTDA 376 (454)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~g~l~dr-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 376 (454)
.+.+.......+....+....+++.|| ++.++ .... +....+.........++.+.. ....+.+.+...
T Consensus 243 ~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~~-------~~~~--~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~g~~~ 313 (400)
T PRK11646 243 SAVKWMYAIEACLSLTLLYPIARWSEKRFRLEH-------RLMA--GLLIMSLSMFPIGMVSNLQQLFTLICLFYIGSII 313 (400)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhH-------HHHH--HHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHH
Confidence 888888888777666655555666654 44332 1221 222222222222222223222 222333333333
Q ss_pred hhcchhhhhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHhccC---C-chhHHHHHHHHHHHHHHHHHHhccC
Q 012902 377 FSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHG---S-WDDVFKVSVGLYLVGTAVWNLFSTG 449 (454)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~---g-~~~~~~~~~~~~~~~~~~~~~~~~~ 449 (454)
..++......+..|++++|++.|+++...++|..+||.+.|.+.|+. + ....++..+++.+++.+......++
T Consensus 314 ~~p~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~ig~~l~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (400)
T PRK11646 314 AEPARETLSASLADARARGSYMGFSRLGLALGGAIGYIGGGWLFDLGKALNQPELPWMMLGIIGLITLLALYWQFSQ 390 (400)
T ss_pred HHccHHHHHHhcCCcccchhhhhHHHHHHHHHHHhcccchHHHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHHhh
Confidence 33333333445566789999999999999999999999999999983 2 3556666566666555554443333
No 58
>PRK15011 sugar efflux transporter B; Provisional
Probab=100.00 E-value=4.8e-33 Score=264.42 Aligned_cols=358 Identities=16% Similarity=0.062 Sum_probs=246.6
Q ss_pred Hhhhchhhhhcchh-hhhhcCCChhhHHHHHHHHHH-HHHHhhhhhhhhhccccchHHH-HHHHHHHHHHHhhhhhcccc
Q 012902 58 IVFGQVNMSIAILP-MSAEFNWNPATVGLIQSSFFW-GYLLTQIAGGIWADTVGGKAVL-GFGVVWWSIATALTPVAAKL 134 (454)
Q Consensus 58 ~~~~~~~~~~~~~~-i~~~~~~s~~~~g~~~s~~~~-~~~~~~~~~g~l~dr~Grr~~~-~~~~~~~~~~~~l~~~~~~~ 134 (454)
..+......+.+|. +.+|+|.|++++|++.+...+ +..++.++.|+ +||+||||.+ ..+.+..+++..+.++++
T Consensus 27 ~~~~~~~~~p~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~-~dr~g~r~~~~~~~~~~~~~~~~~~~~~~-- 103 (393)
T PRK15011 27 TGIAGALQTPTLSIFLTDEVHARPAMVGFFFTGSAVIGILVSQFLAGR-SDKRGDRKSLIVFCCLLGVLACTLFAWNR-- 103 (393)
T ss_pred HHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHH-HhcccchhHHHHHHHHHHHHHHHHHHHhh--
Confidence 55555556666665 688999999999999877655 55555544555 9999999874 556666677888888888
Q ss_pred cHHHHHHHHHHHHhhcccchhhhhHHHhhhcCccch--HHHHHHHHhhHHHHHHhHHhHHHHHhhccCcchhHHHHhHHH
Q 012902 135 GLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAER--SRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLG 212 (454)
Q Consensus 135 ~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r--g~~~~~~~~~~~~g~~ig~~l~~~l~~~~gwr~~f~~~~~~~ 212 (454)
+++.+++.+.+.|...+...|...+++.|+.++++| +...++.+.+.++|.++||++++.+.+++|||..|++.++..
T Consensus 104 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~g~~i~~~l~~~~gw~~~f~~~~~~~ 183 (393)
T PRK15011 104 NYFVLLFVGVFLSSFGSTANPQMFALAREHADKTGREAVMFSSFLRAQVSLAWVIGPPLAYALAMGFSFTVMYLSAAVAF 183 (393)
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHhhHHHHHHHHhcChHHHHHHHHHHH
Confidence 888876665554444456788888888998876655 345688899999999999999999999999999999999888
Q ss_pred HHHHHHHHHhcCCCCCCCCCCChhhhhhhhhccccCCCCCCcchhHhhcC-cchHHHHHHHHHHHHHHHHHHhhHHHHHH
Q 012902 213 TVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSK-PPVWALIVSHFCHNWGTFILLTWMPTYYN 291 (454)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 291 (454)
++..+..+...||.++++++.++ +. .. ..++ +..+............+..+..+.|.|++
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~-~~---------------~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~ 244 (393)
T PRK15011 184 IVCGVMVWLFLPSMRKELPLATG-TL---------------EA---PRRNRRDTLLLFVICTLMWGTNSLYIINMPLFII 244 (393)
T ss_pred HHHHHHHHhhcCccCCCCccccc-cc---------------cc---cccccccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88777767767776543221110 00 00 0112 22333333444444555666778999999
Q ss_pred HHhCCcccchhhHhHHHHHHHHHHHHHHHHHhhhhhhcCccchhhHHHHHHHHHHHHHHHHHHhhccChhHHHHHHHHHH
Q 012902 292 QVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLCMACS 371 (454)
Q Consensus 292 ~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 371 (454)
+.+|+++.+.+.+.....+..+++.++.|+++||+++|+... ............. ...++.+.......+.
T Consensus 245 ~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~~~~-------~~~~~~~~~~~~~--~~~~~~~~~l~~~~l~ 315 (393)
T PRK15011 245 NELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKRFLMR-------VAAVAGVCFYAGM--LMAHSPAILLGLQLLN 315 (393)
T ss_pred HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHH-------HHHHHHHHHHHHH--HHHhhHHHHHHHHHHH
Confidence 889999999998888877888889999999999999985321 1111111111111 1122233222222222
Q ss_pred HhhhhhhcchhhhhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHHHHh
Q 012902 372 QGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWNLF 446 (454)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 446 (454)
....+...+.......+..|++++++.++++...++|..++|.+.|.+.|..||+..+.+.+++.+++.+..+..
T Consensus 316 ~~~~g~~~~~~~~~~~~~~p~~~g~~~~~~~~~~~lg~~~g~~l~G~i~~~~g~~~~~~~~~~~~~~~~~~~~~~ 390 (393)
T PRK15011 316 AIYIGILGGIGMLYFQDLMPGQAGSATTLYTNTSRVGWIIAGSLAGIVAEIWNYHAVFWFALVMIIATLFCLLRI 390 (393)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhh
Confidence 222222222223344566677899999999999999999999999999999999999988888887777666554
No 59
>PRK10054 putative transporter; Provisional
Probab=100.00 E-value=2.4e-33 Score=266.03 Aligned_cols=358 Identities=10% Similarity=0.065 Sum_probs=262.5
Q ss_pred Hhhhchhhhhcch-hhhhhcCCChhhHHHHHHHHHHHHHHhhhhhhhhhccccchHHHHHHHHHHHHHHhhhhhcccccH
Q 012902 58 IVFGQVNMSIAIL-PMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGL 136 (454)
Q Consensus 58 ~~~~~~~~~~~~~-~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~l~~~~~~~~~ 136 (454)
.........+.+| ++++++|.|..++|++.+.+.++..+++++.|+++||+|||+++..+.++.+++.++.++++ ++
T Consensus 19 ~~~g~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~~~~~~~~~~~~~~~--~~ 96 (395)
T PRK10054 19 LTIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRYMLLAITAFASGFIAIPLVN--NV 96 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHh--HH
Confidence 4455555555554 47788999999999999999999999999999999999999999999999999999999999 89
Q ss_pred HHHHHHHHHHHhhcccchhhhhHHHhhhcCccchHHHHHHHHhhHHHHHHhHHhHHHHHhhccCcchhHHHHhHHHHHHH
Q 012902 137 PFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWF 216 (454)
Q Consensus 137 ~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~ig~~l~~~l~~~~gwr~~f~~~~~~~~~~~ 216 (454)
+.++++|.+.|.+.+...+...++..|..|+++|++++++.....++|..+||++++.+.+ .+||..|++.+++.++..
T Consensus 97 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~~-~g~~~~f~~~~~~~~i~~ 175 (395)
T PRK10054 97 TLVVLFFALINCAYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLVM-QSINLPFWLAAICSAFPL 175 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hccCcHHHHHHHHHHHHH
Confidence 9999999999988787888899999999999999999999999999999999999999875 799999999888777765
Q ss_pred HHHHHhcCCCCCCCCCCChhhhhhhhhccccCCCCCCcchhHhhcCcchHHHHHHHHHHHHHHHHHHhhHHHHHHHH--h
Q 012902 217 TVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQV--L 294 (454)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~ 294 (454)
++..+..||+++++++. ++ + ..+.++.+|+|+++...+..++..+.......+.+.|+.+. .
T Consensus 176 i~~~~~~~~~~~~~~~~--~~-~-------------~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 239 (395)
T PRK10054 176 VFIQIWVQRSEKAIATE--TG-S-------------VWSPSVLLQDKALLWFTCSGFLASFVSGAFASCISQYVMVVADS 239 (395)
T ss_pred HHHHHHHhccccccccc--hh-h-------------hhhhhhhccCceehHHHHHHHHHHHHHHHhhhhHHHHHHHhccc
Confidence 55555455443221110 00 0 11125578899999888887877777776767777777543 3
Q ss_pred CCcccchhhHhHHHHHHHHHHHHHHHHHhhhhhhcCccchhhHHHHHHHHHHHHHHHHHHhhccChhH-HHHHHHHHHHh
Q 012902 295 HFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPA-MAVLCMACSQG 373 (454)
Q Consensus 295 g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 373 (454)
+.+....+.......+.....+...|++.||.++|+. .................. .++.+ +.+.....+.+
T Consensus 240 ~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-------l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g 311 (395)
T PRK10054 240 DFAEKVVAVVLPVNAAMVVSLQYSVGRRLNAANIRPL-------MTAGTLCFVIGLVGFIFS-GNSLLLWGMSAAVFTVG 311 (395)
T ss_pred chHHHHHHHHHHhhhhheeeehhHHHHHHccCCchhH-------HHHHHHHHHHHHHHHHHc-chHHHHHHHHHHHHHHH
Confidence 4556666777777777777777888999999988842 222221111112111111 22232 23333333333
Q ss_pred hhhhhcchhhhhh-cccccccchhHHHHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHHH
Q 012902 374 TDAFSQSGLYSNH-QDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWN 444 (454)
Q Consensus 374 ~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~ 444 (454)
.. ...+...... +..|++.++++.+..+ ...+|..+||.+.|.+.|+.|+...|++.+.+..++.++..
T Consensus 312 ~~-~~~p~~~~~~~~~~p~~~~~~~~~~~~-~~~~G~~~Gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~ 381 (395)
T PRK10054 312 EI-IYAPGEYMLIDHIAPPGMKASYFSAQS-LGWLGAAINPLVSGVILTTLPPWSLFVILALAIVAAWLLML 381 (395)
T ss_pred HH-HHHhhHHHHHHHhCCcccceehHhHHH-HHHHHHHHHHHHHHHHHHHcChhhHHHHHHHHHHHHHHHHH
Confidence 33 3233333333 4456678999988755 67799999999999999999999999887777666655544
No 60
>PRK11010 ampG muropeptide transporter; Validated
Probab=100.00 E-value=9.3e-33 Score=268.36 Aligned_cols=381 Identities=14% Similarity=0.108 Sum_probs=273.9
Q ss_pred HHHHHHHHHHHHHHHHhhhchhhhhcchhhhhhcCCChhhHHHHHHHHHHHHHHhhhhhhhhhccc-----cchHH-HHH
Q 012902 43 KQIISLCVGNFEQIFIVFGQVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTV-----GGKAV-LGF 116 (454)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-----Grr~~-~~~ 116 (454)
++....+.+++. .++........+|.+.++.|.|.+++|.+ +.....+ ++.+++|+++||+ |||+. +..
T Consensus 12 ~~~~~~~~l~~~---~gl~~~~~~~~l~~~l~~~g~~~~~ig~~-~~~~~~~-~~~~l~gpl~Dr~~~~~~Grrr~~ll~ 86 (491)
T PRK11010 12 PNSAILLILGFA---SGLPLALTSGTLQAWMTVENIDLKTIGFF-SLVGQAY-VFKFLWSPLMDRYTPPFLGRRRGWLLA 86 (491)
T ss_pred cHHHHHHHHHHH---HHHHHHHHHHHHHHHHHhCCCCHHHHHHH-HHHHHHH-HHHHHHHHHHHcccccCCCCchHHHHH
Confidence 345555555554 66777788888999999999999999997 4444444 6899999999999 99986 667
Q ss_pred HHHHHHHHHhhhhhcc-cccHHHHHHHHHHHHhhcccchhhhhHHHhhhcCccchHHHHHHHHhhHHHHHHhHHhHHHHH
Q 012902 117 GVVWWSIATALTPVAA-KLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFL 195 (454)
Q Consensus 117 ~~~~~~~~~~l~~~~~-~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~ig~~l~~~l 195 (454)
+.+..+++..++++.+ ..+++.+.+.+++.|++.+...+...+++.|++|+|+|+++.++...+..+|.++++.++..+
T Consensus 87 ~~i~~~~~~~~~a~~~~~~~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~lG~llg~~l~~~l 166 (491)
T PRK11010 87 TQLLLLVAIAAMGFLEPGTQLRWLAALAVVIAFCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLAMLVSGGLALWL 166 (491)
T ss_pred HHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7777777777776653 126888999999999999999999999999999999999999999999999999999999999
Q ss_pred hh-ccCcchhHHHHhHHHHHHHHHHHHhcCCCCCCCCCCChhhhhhhhhccccCCCCCCcchhHhhcCcchHHHHHHHHH
Q 012902 196 IH-RFGWPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFC 274 (454)
Q Consensus 196 ~~-~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (454)
.+ ..|||..|++.+++.++..+..++ .||+++++++ +++.+ +....++++.+++++.+...+..++
T Consensus 167 ~~~~~GWr~~f~i~a~l~ll~~l~~~~-~~e~~~~~~~-~~~~~-----------~~~~~~l~~~~~~~~~~~~ll~~~l 233 (491)
T PRK11010 167 ADRYLGWQGMYWLMAALLIPCIIATLL-APEPTDTIPV-PKTLE-----------QAVVAPLRDFFGRNNAWLILLLIVL 233 (491)
T ss_pred HhcccCHHHHHHHHHHHHHHHHHHHHh-cCCCcccccc-ccchh-----------hhHHHHHHHHHcCcCHHHHHHHHHH
Confidence 98 579999999999887776554443 5665432111 00000 0012356678888888877666666
Q ss_pred HHHHHHHHHhhHHHHHHHHhCCcccchhhHhH-HHHHHHHHHHHHHHHHhhhhhhcCccchhhHHHHHHHHHHHHHHHHH
Q 012902 275 HNWGTFILLTWMPTYYNQVLHFNLTESGLFCV-LPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLT 353 (454)
Q Consensus 275 ~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~-~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (454)
..........+.+.|+.+..|+++.+.+.... ...++.+++.++.|+++||+++|+... ...+........+.
T Consensus 234 ~~~~~~~~~~~~~~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~~l~------i~~~l~~l~~l~~~ 307 (491)
T PRK11010 234 YKLGDAFAMSLTTTFLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRLSLFRALM------IFGILQGVSNAGYW 307 (491)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHH------HHHHHHHHHHHHHH
Confidence 66677777788888987778999999999874 555789999999999999999884221 11111111111111
Q ss_pred Hhhc-cChhHHHHHHHHH-HHhhhhhhcchhhhhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHhccCCchhHHHH
Q 012902 354 QLSH-VDSPAMAVLCMAC-SQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKV 431 (454)
Q Consensus 354 ~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~ 431 (454)
.... .++.+.......+ ....+...........+.++++.+++..|+.+...++|..+++.+.|.+.|..||+..|.+
T Consensus 308 ~l~~~~~~~~~l~~~~~l~~~~~g~~~~~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~~~~~~G~l~~~~G~~~~f~~ 387 (491)
T PRK11010 308 LLSITDKNLYSMGAAVFFENLCGGMGTAAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPVAGWFVEAHGWPTFYLF 387 (491)
T ss_pred HHHhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHH
Confidence 1111 1222222222222 1112212222233333455667889999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhc
Q 012902 432 SVGLYLVGTAVWNLFS 447 (454)
Q Consensus 432 ~~~~~~~~~~~~~~~~ 447 (454)
.+++.+.+.+.....+
T Consensus 388 ~~~~~l~~l~~~~~~~ 403 (491)
T PRK11010 388 SVAAAVPGLLLLLVCR 403 (491)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999888877766654
No 61
>TIGR00898 2A0119 cation transport protein.
Probab=100.00 E-value=9.2e-34 Score=278.87 Aligned_cols=361 Identities=16% Similarity=0.101 Sum_probs=253.1
Q ss_pred hcchhhhhhcCCC---hhhHHHHHHHHHHHHHHhhhhhhhhhccccchHHHHHHHHHHHHHHhhhhhcccccHHHHHHHH
Q 012902 67 IAILPMSAEFNWN---PATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVR 143 (454)
Q Consensus 67 ~~~~~i~~~~~~s---~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~r 143 (454)
+..|.+.+|++++ ..+.+++.+++.++..+++++.|+++||+|||+++..+.++.+++.+++++++ |++.+++.|
T Consensus 110 ~~~~~i~~e~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~--~~~~~~~~r 187 (505)
T TIGR00898 110 TFSSTIVTEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTAFSP--NYTVFLVFR 187 (505)
T ss_pred cccccEEEEecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHcc--cHHHHHHHH
Confidence 5678899999999 89999999999999999999999999999999999999999999999999999 999999999
Q ss_pred HHHHhhcccchhhhhHHHhhhcCccchHHHHHHHHhhHHHHHHhHHhHHHHHhhccCcchhHHHHhHHHHHHHHHHHHhc
Q 012902 144 VFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKA 223 (454)
Q Consensus 144 ~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~ig~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~ 223 (454)
++.|++.+...+...+++.|++|+++|+++.++...+..+|.++++.++..+.+ ||+.|++.+++.++..+.. ++.
T Consensus 188 ~l~G~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~---wr~~~~~~~i~~~~~~~~~-~~~ 263 (505)
T TIGR00898 188 LLVGMGIGGIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYFIPD---WRWLQLAVSLPTFLFFLLS-WFV 263 (505)
T ss_pred HHHHhhccchHHHHHHHhheecChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhH---HHHHHHHHHHHHHHHHHHH-Hhc
Confidence 999999999999999999999999999999999999999999999998877654 9999999988877765555 567
Q ss_pred CCCCCCCCCCCh-hhh-hhh----------------hh--ccccCCCCCCcchhHhhcCcchHHHHHHHHHHHHHHHHHH
Q 012902 224 HSSPAEDPQLRP-AEK-KLI----------------VS--SCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILL 283 (454)
Q Consensus 224 ~~~~~~~~~~~~-~~~-~~~----------------~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (454)
||+|+....+.+ ++. +.. .. +++.+++.++.++++++|+|+++...+......+......
T Consensus 264 ~esp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 343 (505)
T TIGR00898 264 PESPRWLISQGRIEEALKILQRIAKINGKKLPAEVLSLSLEKDLSSSKKQYSFLDLFRTPNLRKTTLCLMMLWFTTAFSY 343 (505)
T ss_pred CCChHHHHHCCCHHHHHHHHHHHHHHcCCCCCHHHHhhhhhhhhhhccCCCcHHHHhCChHHHHHHHHHHHHHHHHHHHH
Confidence 887753211111 100 000 00 0000111123467889999988877666555544443333
Q ss_pred hhHHHHHHHHhCCcccchhhHhHHHHHHHHHHHHHHHHHhhhhhhcCccchhhHHHHHHHHHHHHHHHHHHhhccChhHH
Q 012902 284 TWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAM 363 (454)
Q Consensus 284 ~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (454)
..++.+..+ .+.+. .......++..+++.++.+++.||+|||+.. ......................+.
T Consensus 344 ~~~~~~~~~-~~~~~---~~~~~~~~~~~i~~~~~~~~l~dr~grr~~~-------~~~~~~~~~~~l~~~~~~~~~~~~ 412 (505)
T TIGR00898 344 YGLVLDLGN-LGGNI---YLDLFISGLVELPAKLITLLLIDRLGRRYTM-------AASLLLAGVALLLLLFVPVDLYFL 412 (505)
T ss_pred HHHhccccc-cCCCh---HHHHHHHHHHHHHHHHHHHHHHHHhCCHHHH-------HHHHHHHHHHHHHHHHcCCCchHH
Confidence 333433333 34442 3444556677888999999999999998432 221111111222222222222233
Q ss_pred HHHHHHHHHhhhhhhcchhhhhhccc-ccccchhHHHHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHH
Q 012902 364 AVLCMACSQGTDAFSQSGLYSNHQDI-APRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAV 442 (454)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~ 442 (454)
.....+++.+......+....+..|. |++.|+++.|+.+....+|+.++|.+.+ +. ..++...+.+.++..+++.+.
T Consensus 413 ~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~ig~~i~p~i~~-~~-~~~~~~~~~~~~~~~~~~~~~ 490 (505)
T TIGR00898 413 RTALAVLGKFGITSAFQMVYLYTAELYPTVVRNLGVGVCSTMARVGSIISPFLVY-LG-EKWLFLPLVLFGGLALLAGIL 490 (505)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccccHHHHhhhHhHHHHHHHHHHHHHhHHHH-HH-HHHHhhHHHHHHHHHHHHHHH
Confidence 33333333333333334444454454 4578999999999999999999999998 43 445566777777666666555
Q ss_pred HHHh
Q 012902 443 WNLF 446 (454)
Q Consensus 443 ~~~~ 446 (454)
..++
T Consensus 491 ~~~l 494 (505)
T TIGR00898 491 TLFL 494 (505)
T ss_pred HHcC
Confidence 5444
No 62
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=100.00 E-value=7.8e-33 Score=261.93 Aligned_cols=354 Identities=10% Similarity=0.006 Sum_probs=262.3
Q ss_pred HHhhhchhhhhcchhhhhhcCCChhhHHHHHHHHHHHHHHhhhhhhhhhccccchHHH----HHHHHHHHHHHhhhhhcc
Q 012902 57 FIVFGQVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVL----GFGVVWWSIATALTPVAA 132 (454)
Q Consensus 57 ~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~----~~~~~~~~~~~~l~~~~~ 132 (454)
..........|.+|.+.+|+|.|.+++|++.+++.+...++++++|+++||+|||+.. ..+..+..+ ..+..++
T Consensus 15 ~~~~~~~~~~p~l~~~l~~~g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~l~~~--~~~~~~~ 92 (382)
T TIGR00902 15 GYFCAYGIFLPFFPAWLKGIGLGEEMIGLLIGAALIARFAGGLFFAPLIKDANHIIIALRLLALASAIFAA--AFSAGAH 92 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHH--HHHHhhh
Confidence 4556667788889999999999999999999999999999999999999999985433 222222222 2444677
Q ss_pred cccHHHHHHHHHHHHhhcccchhhhhHHHhhhcCccchHHHHHHHHhhHHHHHHhHHhHHHHHhhccCcchhHHHHhHHH
Q 012902 133 KLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLG 212 (454)
Q Consensus 133 ~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~ig~~l~~~l~~~~gwr~~f~~~~~~~ 212 (454)
+++.+++.|+++|.+.+...|...++..|+ +++|++.+|......++|.+++|++++.+.+++|||..|++.+...
T Consensus 93 --~~~~l~~~~~l~~~~~~~~~p~~~al~~~~--~~~~~~~~g~~~~~~slG~~~g~~l~g~l~~~~g~~~~f~~~~~~~ 168 (382)
T TIGR00902 93 --NAWLLFIAIGLFALFFSAGMPIGDALANTW--QKQFGLDYGKVRLIGSAAFIIGSALFGGLIGMFDEQNILAILTAGL 168 (382)
T ss_pred --hHHHHHHHHHHHHHHHccchhHHHHHHHHH--HHHcCCCccHHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHHHHHH
Confidence 899999999999999988899988887765 4788999999999999999999999999999999999998876553
Q ss_pred HHHHHHHHHhcCCCCCCCCCCChhhhhhhhhccccCCCCCCcchhHhhcCcchHHHHHHHHHHHHHHHHHHhhHHHHHHH
Q 012902 213 TVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQ 292 (454)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 292 (454)
++. +......|+.++++++ + ++ ++.+..+.++++|+|+++...+..++..........+.|.|+++
T Consensus 169 ~~~-~~~~~~~~~~~~~~~~-~-~~-----------~~~~~~~~~~~l~~~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~ 234 (382)
T TIGR00902 169 AFM-LIGFLIKPTIPPKDAI-P-ED-----------ESQGDSAFIALLKNPMNLRFLAAVCLIQGAHAAYYGFSAIYWQA 234 (382)
T ss_pred HHH-HHHHHcCCCCCCCccc-c-cc-----------ccccchhHHHHHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 332 2333323322221111 0 00 00112346778999999999998898888999999999999988
Q ss_pred HhCCcccchhhHhHHHHHHHHHHHHHHHHHhhhhhhcCccchhhHHHHHHHHHHHHHHHHHHhhccChhHHH-HHHHHHH
Q 012902 293 VLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMA-VLCMACS 371 (454)
Q Consensus 293 ~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 371 (454)
.|.++.++|.......+..+++....+++.||+++|+ .+.++.+............++.+.. ....+.+
T Consensus 235 -~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~~---------~l~~~~~~~~~~~~~~~~~~~~~~~~~~q~l~g 304 (382)
T TIGR00902 235 -AGISASATGLLWGIGVLAEIIIFAFSNKLFQNCSARD---------LLLISAIACVGRWAIIGAIEAFPLIFLLQILHC 304 (382)
T ss_pred -CCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHHH---------HHHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHH
Confidence 7999999999999989999999999999999999883 2233333333333333333444433 3444444
Q ss_pred HhhhhhhcchhhhhhcccccccchhHHHHHH-HHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHH
Q 012902 372 QGTDAFSQSGLYSNHQDIAPRYSGVLLGLSN-TAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAV 442 (454)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~ 442 (454)
...+..... ...+.++.|+++++++.++++ ....+|..++|.+.|.+.|+.|+ ..|...+++.+++.++
T Consensus 305 ~~~~~~~~~-~~~~i~~~~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~~~g~-~~~~~~~~~~~~~~~~ 374 (382)
T TIGR00902 305 GTFAVCHLA-AMRYIAAQPGSEIAKLQALYNALAMGGLIAIFTAFAGFIYPTLGA-GTFVFMAIIAAAAFFL 374 (382)
T ss_pred HHHHHHHHH-HHHHHHhCCHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH-HHHHHHHHHHHHHHHH
Confidence 444444443 444444457778999999987 46679999999999999999886 6677777777665433
No 63
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=100.00 E-value=4.2e-35 Score=263.77 Aligned_cols=374 Identities=15% Similarity=0.168 Sum_probs=278.4
Q ss_pred HHHHHHHHHHHHHHHhhhchhhhhcchhhhhhcCCChhhHHHHHHHHHHHHHHhhhhhhhhhccccchHHHHHHHHHHHH
Q 012902 44 QIISLCVGNFEQIFIVFGQVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSI 123 (454)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~ 123 (454)
..+.+..+... ++..|++.+....+.+++.||++++..|++.+.+.+.+.+++|+.|+++|||.||+++..|..++.+
T Consensus 33 ~~l~il~~vnl--mny~Dr~~iagv~~~v~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~~v~~vG~~iW~~ 110 (493)
T KOG1330|consen 33 LTLVILCLVNL--MNYADRYTIAGVLKEVQTYFNISDSELGLLQTVFIVVFMIASPLFGYLADRYNRKRVIAVGIFIWTL 110 (493)
T ss_pred HHHHHHHHHHH--HHHhhhhhhhhhhHHHHHhcCCCchhccchhHHHHHHHHHHHHHHHHHHhhcCcceEEeeHHHHHHH
Confidence 33333444444 6999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhhhcccccHHHHHHHHHHHHhhcccchhhhhHHHhhhcCccchHHHHHHHHhhHHHHHHhHHhHHHHHhhccC-cc
Q 012902 124 ATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFG-WP 202 (454)
Q Consensus 124 ~~~l~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~ig~~l~~~l~~~~g-wr 202 (454)
+.++++++. .+|+++++|.+.|+|.+...|.++++++|.+|.++|++.+++++.+.++|..+|.+.+..+.+..+ ||
T Consensus 111 Av~~~~fs~--~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~~~Wr 188 (493)
T KOG1330|consen 111 AVFASGFSN--HFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASLTFWWR 188 (493)
T ss_pred HHHHHHHHH--HHHHHHHHHHHhccchhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeeccCccceE
Confidence 999999998 999999999999999999999999999999999999999999999999999999999999988766 99
Q ss_pred hhHHHHhHHHHHHHHHHHHhcCCCCCCCCCCChhhhhhhhhccccCCCCCCcchhHhhcCcchHHHHHHHHHHHHHHHHH
Q 012902 203 SVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFIL 282 (454)
Q Consensus 203 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (454)
|.|++.++++++..++.+++.+|+++...++.+.+.+. ..+.....++.+...|++.+....+......+....+
T Consensus 189 ~af~~~avl~vi~~~L~~~f~~eP~rga~~~~~~~~~~-----~~~~ts~~kDl~~l~~~~v~v~~sl~~~a~~fv~Gs~ 263 (493)
T KOG1330|consen 189 WAFRGSAVLGVIVGLLVFLFVREPERGARDEVDGENKM-----VKPFTSVWKDLKVLAKIKVFVLSSLGIIAAQFVIGSL 263 (493)
T ss_pred EEEEeehHHHHHHHHHHHhhccCcccccccccccCCcC-----CCCccchHHHHHHHHccCceeeehHHHHHHHHhcccc
Confidence 99999999999999999998888765422211111110 0111122445666677788887777777777777777
Q ss_pred HhhHHHHHHHH---hCCcccchhhHhHHHHHHHHHHHHHHHHHhhhhhhcCcc--chhhHHHHHHHHHHHHHHHHHHhh-
Q 012902 283 LTWMPTYYNQV---LHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLS--VTTVRKIMQSIGFLGPAFFLTQLS- 356 (454)
Q Consensus 283 ~~~~~~~l~~~---~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~- 356 (454)
..|.|.++... .|++..+...+..+...++.+|.+.+|.++||+.++... ...........+......++....
T Consensus 264 sww~p~~~~~~~~~~~~~~~~~~ifg~vt~~~G~lGvl~Ggiisd~~~~~~~~~~~~~~~q~~~~~g~~~s~~~L~~~~~ 343 (493)
T KOG1330|consen 264 SWWAPAFIYYSYELIGFDHNATLIFGGVTCAGGSLGVLFGGIISDKLSRIFPNSGTLRASQLSAALGAPLSIPFLFLFPA 343 (493)
T ss_pred chhhhhHHHHHHHHhCCccccchhhhhHHHhhchhhheehHHHHHHHHHhcccccchhHHHHHHhhhhhHHHHHHHHHHh
Confidence 77777665443 456666777777888899999999999999997653221 100011222222222222222222
Q ss_pred -ccChhHHHHHHHHHHHhhhhhhc-chhhhhhcccccccchhHHHHHHHHHHH-HHHHHHHHHHHHhcc-CCch
Q 012902 357 -HVDSPAMAVLCMACSQGTDAFSQ-SGLYSNHQDIAPRYSGVLLGLSNTAGVL-AGVFGTAATGYILQH-GSWD 426 (454)
Q Consensus 357 -~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~-g~~~~~~~~g~l~~~-~g~~ 426 (454)
.....+..+.+++++........ +......+.++|++|.++.++-..+..+ |.+-+|++.|.+.|+ .||+
T Consensus 344 ~~~~s~~~~~il~~~g~~~~~~~~a~n~~i~l~vV~p~~Rt~a~a~~~~~~h~fgd~~~p~ivGilsd~l~g~~ 417 (493)
T KOG1330|consen 344 FTSSSMIFGLILFLVGETISWFNWATNNPIFLEVVPPSRRTTAYALDTVFEHIFGDAASPYIVGILSDKLRGYK 417 (493)
T ss_pred hhhHHHHHHHHHHHHHHHHHhcccccccceeeEecCcccccHHHHHHHHHHHHhccCCCcceehhHHHHhhCCC
Confidence 22223333333333333333332 3333445667889999999998877766 555566699999998 5555
No 64
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=100.00 E-value=1.2e-32 Score=258.38 Aligned_cols=338 Identities=28% Similarity=0.436 Sum_probs=282.4
Q ss_pred HHhhhchhhhhcchhhhhhcCCChhhHHHHHHHHHHHHHHhhhhhhhhhccccchHHHHHHHHHHHHHHhhhhhcccccH
Q 012902 57 FIVFGQVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGL 136 (454)
Q Consensus 57 ~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~l~~~~~~~~~ 136 (454)
....+.....+..|.+.+++|.++.+.+++.+.+.++..+++++.|+++||+|||+.+..+.++..++.+++.+.+ ++
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~g~r~~~~~~~~~~~~~~~~~~~~~--~~ 87 (352)
T cd06174 10 LSGLDRGLLSPALPLLAEDLGLSASQAGLIVSAFSLGYALGSLLAGYLSDRFGRRRVLLLGLLLFALGSLLLAFAS--SL 87 (352)
T ss_pred HHHHhhhhhHhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchhhHHHHHHHHHHHHHHHHhc--cH
Confidence 5777888888899999999999999999999999999999999999999999999999999999999999999998 99
Q ss_pred HHHHHHHHHHHhhcccchhhhhHHHhhhcCccchHHHHHHHHhhHHHHHHhHHhHHHHHhhccCcchhHHHHhHHHHHHH
Q 012902 137 PFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWF 216 (454)
Q Consensus 137 ~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~ig~~l~~~l~~~~gwr~~f~~~~~~~~~~~ 216 (454)
+.+++.|++.|++.+...+...+++.|++|+|+|++.+++.+....+|..++|.+++.+.+..+||+.+++.+.+.++..
T Consensus 88 ~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (352)
T cd06174 88 WLLLVGRFLLGLGGGALYPAAAALIAEWFPPKERGRALGLFSAGFGLGALLGPLLGGLLAESLGWRWLFLILAILGLLLA 167 (352)
T ss_pred HHHHHHHHHHHcccccccHhHHHHHHHhCCccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999888877776
Q ss_pred HHHHHhcCCCCCCCCCCChhhhhhhhhccccCCCCCCcchhHhhcCcchHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCC
Q 012902 217 TVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHF 296 (454)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~ 296 (454)
+...+.. |+++...+..++..........+.|.+.++..|.
T Consensus 168 ~~~~~~~---------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (352)
T cd06174 168 LLLLFLL---------------------------------------RLLLLLALAFFLLSFGYYGLLTYLPLYLQEVLGL 208 (352)
T ss_pred HHHHHHH---------------------------------------HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC
Confidence 6554432 3566677788888888899999999999997799
Q ss_pred cccchhhHhHHHHHHHHHHHHHHHHHhhhhhhcC-ccchhhHHHHHHHHHHHHHHHHHHhhccChhH-HHHHHHHHHHhh
Q 012902 297 NLTESGLFCVLPWLTMAFSANLGGWIADTLVSKG-LSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPA-MAVLCMACSQGT 374 (454)
Q Consensus 297 s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 374 (454)
+..+.+.......++..++.++.+++.||+++|+ .. ..+..............++.+ ......+.+.+.
T Consensus 209 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~---------~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~ 279 (352)
T cd06174 209 SAAEAGLLLSLFGLGGILGALLGGLLSDRLGRRRLLL---------LIGLLLAALGLLLLALAPSLALLLVALLLLGFGL 279 (352)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHH---------HHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999984 22 122222222222222222233 333344444444
Q ss_pred hhhhcchhhhhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHHH
Q 012902 375 DAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWN 444 (454)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~ 444 (454)
............+..++++|++..|+.+...+++..++|.+.|.+.|..+++..+.+.+++.+++.+...
T Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~~~~~~~~~~~~~~~~~i~~i~~~ 349 (352)
T cd06174 280 GFAFPALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLLDTGGYGGVFLILAALALLAALLLL 349 (352)
T ss_pred hccchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHHHHhe
Confidence 4444444444445555689999999999999999999999999999999999999999998888776554
No 65
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=100.00 E-value=2e-32 Score=260.08 Aligned_cols=353 Identities=14% Similarity=0.165 Sum_probs=258.8
Q ss_pred HHhhhchhhhhcchhhhhhcCCChhhHHHHHHHHHHHHHHhhhhhhhhhccccchHHHHHHHHHHHHHHhhhhh---ccc
Q 012902 57 FIVFGQVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPV---AAK 133 (454)
Q Consensus 57 ~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~l~~~---~~~ 133 (454)
..++.....++.+|.+++++|.|+.+.|++.+.+.+++.+++++.|++.||+|||+++..+.++++++.+++.. .+
T Consensus 14 ~~G~~~~~~~~l~~~~~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~~l~~~g~~l~~~~~~~~- 92 (410)
T TIGR00885 14 LWGFANDITNPMVPQFQQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKAGILLGLFLYALGAFLFWPAAEIM- 92 (410)
T ss_pred HHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHhhc-
Confidence 56777788889999999999999999999999999999999999999999999999999999999999988644 35
Q ss_pred ccHHHHHHHHHHHHhhcccchhhhhHHHhhhcCccchHHHHHHHHhhHHHHHHhHHhHHHHHhhc---------------
Q 012902 134 LGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHR--------------- 198 (454)
Q Consensus 134 ~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~ig~~l~~~l~~~--------------- 198 (454)
+++.+++.|++.|+|.|...+..++++.+..|+++|++.+++.+...++|..+||.+++.+...
T Consensus 93 -~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~~~~~~~~~~~~~~~~~~ 171 (410)
T TIGR00885 93 -NYTLFLVGLFILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLILSNLPHQSQDVLDKLSP 171 (410)
T ss_pred -cHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccchhhhhhhcCH
Confidence 7999999999999999999999999999999999999999999999999999999999877422
Q ss_pred -----------cCcchhHHHHhHHHHHHHHHHHHh-cCCCCCCCCCCChhhhhhhhhccccCCCCCCcchhHhhcCcchH
Q 012902 199 -----------FGWPSVFYSFGSLGTVWFTVWLSK-AHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVW 266 (454)
Q Consensus 199 -----------~gwr~~f~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (454)
.+||++|++.+.+.++..++..+. .||.+ +++ +++ +....+.++.+|+|+++
T Consensus 172 ~~~~~~~~~~~~~w~~~fl~~a~~~~~~~~~~~~~~~p~~~--~~~---~~~-----------~~~~~~~~~~~~~~~~~ 235 (410)
T TIGR00885 172 EELSAIKHSDLASVQTPYMIIGAVVLAVALLIMLTKMPALN--HSD---AKQ-----------ISFSASLSRLARIRHYR 235 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCC--ccc---ccc-----------ccchhhHHHHHhChhHH
Confidence 369999999888777664444322 22211 100 000 00012345678999999
Q ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHh-CCcccchhhHhHHHHHHHHHHHHHHHHHhhhhhhcCccchhhHHHHHHHHH
Q 012902 267 ALIVSHFCHNWGTFILLTWMPTYYNQVL-HFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGF 345 (454)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~-g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~ 345 (454)
...+..++......+..++++.|.++.. +.+...++...........+|+++++++.||+++|+. +.....
T Consensus 236 ~~~l~~f~yvg~e~~~~s~l~~y~~~~~~~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~r~~~~~~--------l~i~~~ 307 (410)
T TIGR00885 236 EGVIAQFFYVGVQIMCWTFIIQYAVRLIPGMTAGFAANYNIGAMVIFFISRFIGTWLISYLAAHKV--------LMAYAI 307 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHH--------HHHHHH
Confidence 8888888888888888899999997632 3344444556666677889999999999999998842 111222
Q ss_pred HHHHHHHHHhhccChhHHHHHHHHHHHhhhhhhcchhhhhh-cccccccchhHHHHHHHHHHHHHHHHHHHHHHHhccC-
Q 012902 346 LGPAFFLTQLSHVDSPAMAVLCMACSQGTDAFSQSGLYSNH-QDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHG- 423 (454)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~- 423 (454)
. ...........+.........+.+++..... |...... +..+++.+..+.++... .+|+++.|++.|.+.|..
T Consensus 308 ~-~~~~~ll~~~~~~~~~~~~l~~~glf~s~~f-p~i~sl~~~~~g~~~~~~s~~l~~~--~~Gga~~p~l~G~~~d~~~ 383 (410)
T TIGR00885 308 I-GMALCLGSIFAGGHVGLYCLTLCSAFMSLMF-PTIYGIALKGLGQDTKYGAAGLVMA--IIGGGIVPPLQGFIIDMKE 383 (410)
T ss_pred H-HHHHHHHHHHcCChHHHHHHHHHHHHHHHHH-HHHHHHHHhhhhhhhhhhHHHHHHH--HhccchHHHHHHHHHHHhc
Confidence 2 1122221222223333445555555555555 5555544 44444443334444333 399999999999999953
Q ss_pred -----CchhHHHHHHHHHHHH
Q 012902 424 -----SWDDVFKVSVGLYLVG 439 (454)
Q Consensus 424 -----g~~~~~~~~~~~~~~~ 439 (454)
+++..|++...+.+..
T Consensus 384 ~~~~~~~~~~~~~~~~~~~~~ 404 (410)
T TIGR00885 384 IAAAPAVNTSFILPLLCFAVI 404 (410)
T ss_pred ccccCccchHHHHHHHHHHHH
Confidence 5778887655555443
No 66
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=100.00 E-value=4.2e-33 Score=263.09 Aligned_cols=341 Identities=16% Similarity=0.169 Sum_probs=247.1
Q ss_pred HHhhhchhhhhcchh-hhhhcCCChhhHHHHHHHHHHHHHHhhhhhhhhhccccchHHHHHHHHHHHHHHhhhhhccccc
Q 012902 57 FIVFGQVNMSIAILP-MSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLG 135 (454)
Q Consensus 57 ~~~~~~~~~~~~~~~-i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~l~~~~~~~~ 135 (454)
....+....++..|. +++++|.|+.+.+++.+.+.+++.+++++.|+++||+|||+.+..+.++..++.+++++++. +
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~~~~~~~~-~ 90 (366)
T TIGR00886 12 LSFSVWFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYTTTLSLLLLAIPCLWAGLAVQ-S 90 (366)
T ss_pred HHHHHHHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHhh-h
Confidence 566777888999995 99999999999999999999999999999999999999999999999999999999988753 5
Q ss_pred HHHHHHHHHHHHhhcccchhhhhHHHhhhcCccchHHHHHHHHhhHHHHHHhHHhHHHHHhh----------ccCcchhH
Q 012902 136 LPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIH----------RFGWPSVF 205 (454)
Q Consensus 136 ~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~ig~~l~~~l~~----------~~gwr~~f 205 (454)
++.+++.|+++|++.+ ..+...++++|++|+|+|++++++.....++|..+++.+++.+.+ +.+||+.|
T Consensus 91 ~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~~~w~~~~ 169 (366)
T TIGR00886 91 YSVLLLLRLFIGIAGG-SFASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPIIGSLIFGAGLPAHLAWGWAF 169 (366)
T ss_pred HHHHHHHHHHHHHhch-hhHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcccccccccccchh
Confidence 7889999999999965 456778999999999999999999998888888888877776654 34899999
Q ss_pred -HHHhHHHHHHHHHHHHhcCCCCCCCCCCChhhhhhhhhccccCCCCCCcchhHhhcCcchHHHHHHHHHHHHHHHHHHh
Q 012902 206 -YSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLT 284 (454)
Q Consensus 206 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (454)
+..+++..+..++.....+|+|+++++.++.+.+ .+....++....+.++.+++|+++...+..++..........
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (366)
T TIGR00886 170 VIVPAGILLLPALLIFFVGADTPPGKPATGKLSFK---GARWSVGTGALGDQLKVFRDRHTWILALLYSVTFGSFLGVSS 246 (366)
T ss_pred HHHHHHHHHHHHHHHHHhcccCCcccccchhcccc---cccccccchhHHHHHHHHhccchhhHHHHHHHHHHHHHHHHH
Confidence 4445555555555555556655432211111000 000000000111456678899999888888877777888889
Q ss_pred hHHHHHHHHhCCcccchhhHhHHHHHHHHHHHHHHHHHhhhhhhcCccchhhHHHHHHHHHHHHHHHHHHhhccC--hhH
Q 012902 285 WMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVD--SPA 362 (454)
Q Consensus 285 ~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 362 (454)
+.|.|+++.+|.++.+++.......+..++++++.|++.||+++|+.. ...................+ +..
T Consensus 247 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (366)
T TIGR00886 247 IFAMFFKDQFGLSKVTAGAYASLGGLLGSLARPLGGAISDRLGGARKL-------LMSFLGVAMGAFLVVLGLVSPLSLA 319 (366)
T ss_pred HHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHhhccchHHHhhccchhH-------HHHHHHHHHHHHHHHhcCCCcchHH
Confidence 999999998999999999999999999999999999999999998532 22222222222222222221 232
Q ss_pred HHHHHHHHHHhhhhhhcchhhhhhcccccccchhHHHHHHHHHHHHH
Q 012902 363 MAVLCMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAG 409 (454)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~ 409 (454)
.............+...........+..|+++|++.|+.+..+++|+
T Consensus 320 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~ 366 (366)
T TIGR00886 320 VFIVLFVALFFFSGAGNGSTFALVPHIFRRATGAVSGLVGAIGNLGG 366 (366)
T ss_pred HHHHHHHHHHHHhccccchhhhcchhhchhhcccHHHHHHHhccCCC
Confidence 22222222222233333444455556667899999999999888763
No 67
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=100.00 E-value=6.6e-33 Score=264.39 Aligned_cols=359 Identities=17% Similarity=0.161 Sum_probs=255.2
Q ss_pred HHhhhchhhhhcchhhhhhcC--CChhhHHHHHHH-----HHHHHHHhhhhhhhhhccccchHHHHHHHHHHHHHHhhhh
Q 012902 57 FIVFGQVNMSIAILPMSAEFN--WNPATVGLIQSS-----FFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTP 129 (454)
Q Consensus 57 ~~~~~~~~~~~~~~~i~~~~~--~s~~~~g~~~s~-----~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~l~~ 129 (454)
.+.+|+..++...+.+.+++. .++.+.+.+.+. ..++..+++++.|+++||+|||+++..+.++..++.++++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~ 83 (394)
T TIGR00883 4 VEWFDFYLYGFAAVLVFHTFFPPSGDPLVALLATFATFAAGFLARPLGAIVFGHFGDRIGRKKTLVITLLMMGIGTLLIG 83 (394)
T ss_pred hhHHHHHHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHHh
Confidence 577888888888888777754 445666665543 3334457899999999999999999999999999999999
Q ss_pred hcccccHH--------HHHHHHHHHHhhcccchhhhhHHHhhhcCccchHHHHHHHHhhHHHHHHhHHhHHHHHh-----
Q 012902 130 VAAKLGLP--------FLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLI----- 196 (454)
Q Consensus 130 ~~~~~~~~--------~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~ig~~l~~~l~----- 196 (454)
+++ +++ .+++.|+++|++.+...+....++.|++|+|+|++..++.+.+..+|..+++.++..+.
T Consensus 84 ~~~--~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~G~~i~~~~~~~~~~~~~~ 161 (394)
T TIGR00883 84 LLP--SYATIGIWAPILLLLARLIQGFSLGGEWGGAALYLAEYAPPGKRGFYGSFQQVGAPVGLLLAALTVLLLSYLLGD 161 (394)
T ss_pred hCC--ChhhhHHHHHHHHHHHHHHHHhhccccccccHHHhhhcCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCH
Confidence 998 764 47889999999999999999999999999999999999999999999999998877654
Q ss_pred ---hccCcchhHHHHhHHHHHHHHHHHHhcCCCCCCCCCCChhhhhhhhhccccCCCCCCcchhHhhcCcc--hHHHHHH
Q 012902 197 ---HRFGWPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPP--VWALIVS 271 (454)
Q Consensus 197 ---~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 271 (454)
+.++||+.|++.+.+.++.... ....+|+++++++.+ +++....+.++.+++++ ++.....
T Consensus 162 ~~~~~~~w~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (394)
T TIGR00883 162 DALLEWGWRIPFLVSAVLVLIGLYL-RRNLEETPVFEKAQE-------------KHKKKRGPIRETLTKHRKPFLLGLGL 227 (394)
T ss_pred HHhhccchHHHHHHHHHHHHHHHHH-HHhcCCChhHHHHHh-------------ccccccCCHHHHHHhchHHHHHHHHH
Confidence 3578999999877666554332 333444332211100 00111334566677765 7777777
Q ss_pred HHHHHHHHHHHHhhHHHHHHHHhCCcccchhhHhHHHHHHHHHHHHHHHHHhhhhhhcCccchhhHHHHHHHHHHHHH-H
Q 012902 272 HFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPA-F 350 (454)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~-~ 350 (454)
.++..........+.|.|+++.+|.++.+.+.......+...++.++.|++.||+++|+.... ......... .
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~------~~~~~~~~~~~ 301 (394)
T TIGR00883 228 VIATTTTFYLITTYLPTYLTQTLGLSANSALLVLMLSLILFFITIPLSGALSDRIGRRPVLII------FTVLAALLAVP 301 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHH------HHHHHHHHHHH
Confidence 777777788888999999988889999999999999999999999999999999998843211 111111111 1
Q ss_pred HHHHhhccChhHHHH-HHHHHHHhhhhhhcchhhhhhcccccccchhHHHHH-HHHHHHHHHHHHHHHHHHhccCC-chh
Q 012902 351 FLTQLSHVDSPAMAV-LCMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLS-NTAGVLAGVFGTAATGYILQHGS-WDD 427 (454)
Q Consensus 351 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~g~~~~~~~~g~l~~~~g-~~~ 427 (454)
........++.+... .....+.+......+......+..|+++|+++.|+. +....+|..++|.+.|.+.|+.| ++.
T Consensus 302 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~g~l~~~~g~~~~ 381 (394)
T TIGR00883 302 LLMALLDSGSFTLFFFLVLGLALIGGMYTGPMGSFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYIAAALVAMTGDWYA 381 (394)
T ss_pred HHHHHhcCCchHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCccceeeEeeehhHhHHHHHhhHHHHHHHHHHHHcCcchh
Confidence 111111222333322 233333333334444444444556667899999985 45566788899999999999977 766
Q ss_pred HHHHHHHHHH
Q 012902 428 VFKVSVGLYL 437 (454)
Q Consensus 428 ~~~~~~~~~~ 437 (454)
.++...+..+
T Consensus 382 ~~~~~~~~~l 391 (394)
T TIGR00883 382 IGYYLAALAL 391 (394)
T ss_pred HHHHHHHHHH
Confidence 6665555443
No 68
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=100.00 E-value=1.9e-32 Score=257.18 Aligned_cols=331 Identities=11% Similarity=0.091 Sum_probs=246.3
Q ss_pred hhhhhcchhhhhhcCCChhhHHHHHHHHHHHHHHhhhhhhhhhccccchHHHHHHHHHHHHHHhhhhhcccccHHHHHHH
Q 012902 63 VNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVV 142 (454)
Q Consensus 63 ~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~ 142 (454)
...++.+|.+++|+|.|.++.|++.+.+.++..+++++.|+++||+|||+++..+.++..++.+.+ .++ +.+.+++.
T Consensus 17 ~~~~~~lp~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~-~~~--~~~~l~~~ 93 (355)
T TIGR00896 17 TSVGPLLPQIRSALGMSFSVAGLLTALPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAGILIR-SAP--GTALLFAG 93 (355)
T ss_pred ccCcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHHHHHH-Hhc--cHHHHHHH
Confidence 567889999999999999999999999999999999999999999999999999999988888877 777 88999999
Q ss_pred HHHHHhhcccchhhhhHHHhhhcCccchHHHHHHHHhhHHHHHHhHHhHHHHHhhcc--CcchhHHHHhHHHHHHHHHHH
Q 012902 143 RVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRF--GWPSVFYSFGSLGTVWFTVWL 220 (454)
Q Consensus 143 r~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~ig~~l~~~l~~~~--gwr~~f~~~~~~~~~~~~~~~ 220 (454)
|++.|++.+...+....++.|++| ++|++++++.+.+.++|..+++.+++.+.++. +||+.|...+.+.++...
T Consensus 94 ~~~~g~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~~~~w~~~f~~~~~~~~~~~~--- 169 (355)
T TIGR00896 94 TALIGVGIAIINVLLPSLIKRDFP-QRVGLMTGLYSMALMGGAALAAAATVPLAQHSGGHWQQALAWWALPALLALL--- 169 (355)
T ss_pred HHHHHHHHHHHhccchHHHHHhCc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHH---
Confidence 999999999888888889999985 78999999999999999999999999888765 399998877665444322
Q ss_pred HhcCCCCCCCCCCChhhhhhhhhccccCCCCCCcchhHhhcCcchHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCcccc
Q 012902 221 SKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTE 300 (454)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~ 300 (454)
...|+.++++++.++ ....+.++.+|+|.++...+..++....++....++|.|+++ .|.++.+
T Consensus 170 ~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~-~g~~~~~ 233 (355)
T TIGR00896 170 AWIPQVRRRVAANQT---------------TTRLTPVRIWRSPLAWQVTVFFGLQSGLYYSLIGWLPAILIS-HGASAAT 233 (355)
T ss_pred HHhhhhccccCCCCC---------------CCCCCCchhhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHH
Confidence 223333221111000 001234457888998887777777777888888999999988 6999999
Q ss_pred hhhHhHHHHHHHHHHHHHHHHHhhhhhhcCccchhhHHHHHHHHHHHHHHHHHHhhccChhHHHHHHHHHHHhhhhhhcc
Q 012902 301 SGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLCMACSQGTDAFSQS 380 (454)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (454)
.+...+...++.+++++..|++.||+++|+. ...........+.........+ .. .....+.+.+.+.....
T Consensus 234 ~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~~------~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~l~g~~~g~~~~~ 305 (355)
T TIGR00896 234 AGSLLALMQLAQAASALLIPALARRVKDQRG------IVAVLAVLQLVGLCGLLFAPMH-GL-WAWALVLGLGQGGAFPL 305 (355)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHhhhccchH------HHHHHHHHHHHHHHHHHHhhhh-HH-HHHHHHHHHhhhhHhHH
Confidence 9999999999999999999999999965531 1111111111111111111111 11 12233444444333322
Q ss_pred hhhhhhcccc-cccchhHHHHHHHHHHHHHHHHHHHHHHHhccCC
Q 012902 381 GLYSNHQDIA-PRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGS 424 (454)
Q Consensus 381 ~~~~~~~~~~-~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g 424 (454)
......++.+ +++++...++.+...+++..++|.+.|.+.|+.|
T Consensus 306 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gp~~~G~l~~~~g 350 (355)
T TIGR00896 306 ALTLIGLRSRQAAQAAALSAMAQSIGYLLAALGPLFVGVLHDISG 350 (355)
T ss_pred HHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 2233333444 4578899999999999999999999999999844
No 69
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=100.00 E-value=3.7e-31 Score=250.66 Aligned_cols=352 Identities=12% Similarity=0.071 Sum_probs=252.3
Q ss_pred HhhhchhhhhcchhhhhhcCCChhhHHHHHHHHHHHHHHhhhhhhhhhccccch----HHHHHHHHHHHHHHhhhhhccc
Q 012902 58 IVFGQVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGK----AVLGFGVVWWSIATALTPVAAK 133 (454)
Q Consensus 58 ~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr----~~~~~~~~~~~~~~~l~~~~~~ 133 (454)
.........+.+|.+.+|+|.|.+++|++.+++.++..++++++|++.||+||| +.+..+..+. .......++
T Consensus 16 ~~~~~g~~~p~l~~~l~~~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~g~~~~~~~~~~~~~~~~--~~~~~~~~~- 92 (382)
T PRK11128 16 YFFAYGVFLPFWSVWLKGQGYTPETIGLLLGAGLVARFLGSLLIAPRVKDPSQLIPALRLLALLTLLF--AVAFWFGAH- 92 (382)
T ss_pred HHHHHHHHhhhHHHHHHhcCCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhhcchHHHHHHHHHHHHHH--HHHHHHhcc-
Confidence 335556788888998999999999999999999999999999999999999984 3333222222 223334456
Q ss_pred ccHHHHHHHHHHHHhhcccchhhhhHHHhhhcCccchHHHHHHHHhhHHHHHHhHHhHHHHHhhccCcchhHHHHhHHHH
Q 012902 134 LGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGT 213 (454)
Q Consensus 134 ~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~ig~~l~~~l~~~~gwr~~f~~~~~~~~ 213 (454)
++|.+++.|++.|++.+...|...+++.++ +++|+++.+......++|.++||++++.+.+++|||..|++.+...+
T Consensus 93 -~~~~l~i~~~l~g~~~~~~~~~~~a~~~~~--~~~~~~a~~~~~~~~~lg~~igp~lgg~l~~~~g~~~~f~~~~~~~~ 169 (382)
T PRK11128 93 -SFWLLFVAIGLFNLFFSPLVPLTDALANTW--QKQIGLDYGKVRLWGSIAFVIGSALTGKLVSWFGEQAILWILTAGVA 169 (382)
T ss_pred -cHHHHHHHHHHHHHHHcccccHHHHHHHHH--HhhccCCcchHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHHHHHHH
Confidence 899999999999999998999888888876 46788899999999999999999999999999999999998776544
Q ss_pred HHHHHHHHhcCCCCCCCCCCChhhhhhhhhccccCCCCCCcchhHhhcCcchHHHHHHHHHHHHHHHHHHhhHHHHHHHH
Q 012902 214 VWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQV 293 (454)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 293 (454)
+..+ .....||+++++++ +++ +++...++++++|+|+++...+..++..........+.|.|+++
T Consensus 170 ~~~~-~~~~~~~~~~~~~~---~~~----------~~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~- 234 (382)
T PRK11128 170 SMLL-GQLLRPTIMPQGES---RQQ----------ESAGWPAWKALLKEPTVWRFLLCVSLLQGSHAAYYGFSAIYWQA- 234 (382)
T ss_pred HHHH-HHHccCCCCCcccc---ccc----------cccccchHHHHHcChhHHHHHHHHHHHHHHhHhHHHHHHHHHHH-
Confidence 4433 23333432211110 000 00113457889999999988888888777777888899999977
Q ss_pred hCCcccchhhHhHHHHHHHHHHHHHHHHHhhhhhhcCccchhhHHHHHHHHHHHHHHHHHHhhccChhHHHHH-HHHHHH
Q 012902 294 LHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVL-CMACSQ 372 (454)
Q Consensus 294 ~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 372 (454)
.|.++.+.|.......+..++.....+++.||+++|+. +..+..............++.+.... .++.+.
T Consensus 235 ~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~---------l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~ 305 (382)
T PRK11128 235 AGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRWSARDL---------LLLSAICGVVRWGLMGSTTALPWLIVIQILHCG 305 (382)
T ss_pred CCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH---------HHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHH
Confidence 79999999999998889999999999999999998842 12222222222222223334443333 333333
Q ss_pred hhhhhhcchhhhhhcccccccchhHHHHHH-HHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHH
Q 012902 373 GTDAFSQSGLYSNHQDIAPRYSGVLLGLSN-TAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTA 441 (454)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~ 441 (454)
+.. ...+....+..+.+++++++..+..+ ....+|..+||.+.|.+.|..|+ ..++..+++.+++..
T Consensus 306 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l~~~~g~-~~~~~~~~~~~~~~~ 373 (382)
T PRK11128 306 TFT-VCHLAAMRYIAARPGSEVIRLQALYSALAMGGSIAIMTVLSGFLYQHLGA-GVFWVMALVALPALF 373 (382)
T ss_pred HHH-HHHHHHHHHHHHCCHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH-HHHHHHHHHHHHHHH
Confidence 333 33344444444556667788999887 44567789999999999999887 456666655554433
No 70
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=6.4e-33 Score=244.21 Aligned_cols=344 Identities=19% Similarity=0.140 Sum_probs=272.0
Q ss_pred CChhhHHHHHHHHHHHHHHhhhhhhhhhccccchHHHHHHHHHHHHHHhhhhhcccccHHHHHHHHHHHHhhcccchhhh
Q 012902 78 WNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAM 157 (454)
Q Consensus 78 ~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~ 157 (454)
-+++++|++.+.+.+.+.+.+++.|.+.||+|+|..++.|+.++..+++++++.+ ++++++++|.+||+|.++..+..
T Consensus 103 ~e~~~iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFafg~--sy~~l~vAR~LQgvgsA~~~tsg 180 (464)
T KOG3764|consen 103 RENTQIGLLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAFGN--SYPMLFVARSLQGVGSAFADTSG 180 (464)
T ss_pred ccccchhHHHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHHHcc--hhHHHHHHHHHhhhhHHHHHhhh
Confidence 3567899999999999999999999999999999999999999999999999999 99999999999999999999999
Q ss_pred hHHHhhhcCccc-hHHHHHHHHhhHHHHHHhHHhHHHHHhhccCcchhHHHHhHHHHHHHHHHHHhcCCCCCCCCCCChh
Q 012902 158 NNILSKWVPVAE-RSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPA 236 (454)
Q Consensus 158 ~~~i~~~~~~~~-rg~~~~~~~~~~~~g~~ig~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (454)
.++++|.+|+++ |++++|+...+.++|..+||+.||.+.+..|.+.+|++.++++++...+.++..+.++.+++..
T Consensus 181 lamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~Gk~aPFlVL~~v~Lld~~L~l~vi~p~~~~~~~~--- 257 (464)
T KOG3764|consen 181 LAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFAGKSAPFLVLAIVLLLDGALQLLVIEPTEMDPDST--- 257 (464)
T ss_pred HHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhcCCcCcHHHHHHHHHHHHHHHHheeCccccCcccc---
Confidence 999999998765 7999999999999999999999999999999999999999999999888887766543332111
Q ss_pred hhhhhhhccccCCCCCCcchhHhhcCcchHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCcccchhhHhHHHHHHHHHHH
Q 012902 237 EKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSA 316 (454)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~ 316 (454)
+ +..++++++++|.++.........+.+.......++.+..|.+..+..+.|+.+....+...++.
T Consensus 258 ~--------------~~~~~~~Ll~dP~I~~~agai~~~n~~lafLePtlslwm~e~m~~p~w~~G~~fLp~~~~y~ig~ 323 (464)
T KOG3764|consen 258 E--------------QGTPMWSLLMDPYILLIAGAITFSNSSLAFLEPTLSLWMLETMFTPGWEVGLAFLPASLSYAIGT 323 (464)
T ss_pred c--------------cCccHHHHHhCchHhhhhcchhhccchHHHhCcccHHHHHHhccCCCcceeeeecccccchhccC
Confidence 1 04467779999999988888777777888888889999988888555599999999999999999
Q ss_pred HHHHHHhhhhhhcCccchhhHHHHHHHHHHHHHHHHHHhhccChhHH-HHHHHHHHHhh---hhhhcchhhhhhcccccc
Q 012902 317 NLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAM-AVLCMACSQGT---DAFSQSGLYSNHQDIAPR 392 (454)
Q Consensus 317 ~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~ 392 (454)
.+.|.+.||+++.+ ....+.+++..+.........+...- ++-...++++. .....|......+....+
T Consensus 324 ~lfg~la~k~~~~~-------wl~~~~gl~~~G~~~~~iP~~~~~~~L~vp~~~l~~~i~~~dasl~P~l~~lvd~rh~s 396 (464)
T KOG3764|consen 324 NLFGKLADKYPHLR-------WLLSLGGLATVGVSSGPIPFATSIAQLWVPNFGLGFGIGLADASLIPTLGYLVDPRHVS 396 (464)
T ss_pred chHHHHHHhcCchh-------HHHHHHHHHHHHHHhchhHhhhhHHHHhhhhHHHHHHHHHHHHHHhhhhHHhcchhhcc
Confidence 99999999999662 23444444444443333333332221 11112222222 222233333332221122
Q ss_pred ---cchhHHHHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHHHHhc
Q 012902 393 ---YSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWNLFS 447 (454)
Q Consensus 393 ---~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 447 (454)
..|...++......+|.++||.++|.+.+..|+.+...+.++..++-.-+..+++
T Consensus 397 ~~~vYGsVyaIad~a~sla~a~GP~~gg~iv~~iGF~wl~~iig~~n~iyapvl~ll~ 454 (464)
T KOG3764|consen 397 GFNVYGSVYAIADAAFSLAYAIGPTFGGSLVEAIGFEWLMTIIGILNLIYAPVLLLLR 454 (464)
T ss_pred ccceeeeHHHHHHHHHHHhhhccccccchheeehhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5789999999999999999999999999999999998888887776655555443
No 71
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.5e-31 Score=256.28 Aligned_cols=395 Identities=15% Similarity=0.164 Sum_probs=308.9
Q ss_pred cchHHHHHHHHHHHHHHHHhhhchhhhhcchhhhhhcCCChhhHHHHHHHHHHHHHHhhhhhhhhhccccchHHHHHHHH
Q 012902 40 NSYKQIISLCVGNFEQIFIVFGQVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVV 119 (454)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~ 119 (454)
.+.|.+....++... ...-....++...+.++++++.+.++++|+.++......+..|+.+.+.||+|.|.+.+.|.+
T Consensus 42 G~gWvV~~a~fl~~~--~~~g~~~~~Gv~~~~~~~~f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rfg~R~v~i~G~~ 119 (509)
T KOG2504|consen 42 GWGWVVVFASFLVNL--STDGLINSFGLLFEELMDYFGSSSSQIAWIGSLLLGVYLLAGPLVSALCNRFGCRTVMIAGGL 119 (509)
T ss_pred CeeeeeeHhHHHHHH--hhhcchheehhhHHHHHHHhCCCccHHHHHHHHHHHHHHHhccHHHHHHhhcCchHHHHHHHH
Confidence 345655555555555 455555566678899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhhhcccccHHHHHHH-HHHHHhhcccchhhhhHHHhhhcCccchHHHHHHHHhhHHHHHHhHHhHHHHHhhc
Q 012902 120 WWSIATALTPVAAKLGLPFLLVV-RVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHR 198 (454)
Q Consensus 120 ~~~~~~~l~~~~~~~~~~~l~~~-r~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~ig~~l~~~l~~~ 198 (454)
+.++|.++.++++ ++|++++. -++.|+|.|..+.+...++..+| +|+|+.+.|+...+.++|.++-|.+...+.+.
T Consensus 120 v~~~g~~lssF~~--~i~~l~lt~gvi~G~G~~~~~~paiviv~~YF-~kkR~lA~Gia~~GsG~G~~~~~~l~~~l~~~ 196 (509)
T KOG2504|consen 120 VAALGLLLSSFAT--SLWQLYLTFGVIGGLGLGLIYLPAVVILGTYF-EKKRALATGIAVSGTGVGTVVFPPLLKYLLSK 196 (509)
T ss_pred HHHHHHHHHHHHh--hHHHHHHHHHHHhhccchhhhcchhhhhhhHh-HHHHHHHHhhhhccCCcceeeHHHHHHHHHHH
Confidence 9999999999999 89887665 89999999999999999999999 68999999999999999999999999999999
Q ss_pred cCcchhHHHHhHHHHHHHHHHHHhcCCCCCCCCC--------------------CCh--hhhhhh---------hhcccc
Q 012902 199 FGWPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQ--------------------LRP--AEKKLI---------VSSCAS 247 (454)
Q Consensus 199 ~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~--~~~~~~---------~~~~~~ 247 (454)
+|||+.+++.+.+.+-..+......|..++.++. .+. ++.... .++..+
T Consensus 197 ~G~r~~~l~~~~~~l~~~~~~~~~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (509)
T KOG2504|consen 197 YGWRGALLIFGGISLNVLVAGALLRPLSPPKKPNEEKDLRNSAASVESTPKPVELRISERDSGLKKLSLSNLATLKRGPD 276 (509)
T ss_pred hCcHHHHHHHHHHHHHHHHHHHHcCCCCcCCCchhhhhhccccccccccccccccccccCCCCCCcccccchhhhhhCCc
Confidence 9999999999999988777777766633322111 000 000000 000000
Q ss_pred C-C--CCCCcc---hhHhhcCcchHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCcccchhhHhHHHHHHHHHHHHHHHH
Q 012902 248 K-E--PVKTIP---WGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGW 321 (454)
Q Consensus 248 ~-~--~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~ 321 (454)
+ . +..... ..+++|+|.++.+.+...+...++.....++|.|.++ .|++..+++.+++..++..++++++.|+
T Consensus 277 ~~~~~~~~~~~~~~d~~ll~~~~fl~~~~~~~~~~~g~~~p~~~l~~~~~~-~g~~~~~aa~l~Siigi~~i~gRi~~G~ 355 (509)
T KOG2504|consen 277 KWRNSPLQAFLSMLDLSLLKDPKFLLLALSNLFAYLGFNVPFVYLPSYAKS-LGLSSNDAAFLLSIIGVSDIIGRIILGL 355 (509)
T ss_pred cccccchhhhhhhhhHHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHhh-cCCChhhhHHHHHHHHHhhhhhhhhhhh
Confidence 0 0 111111 1468999999999999999999999999999999996 7999999999999999999999999999
Q ss_pred HhhhhhhcCccchhhHHHHHHHHHHHHHHHHHHhhccChhHH-HHHHHHHHHhhhhhhcchhhhhhcccccccchhHHHH
Q 012902 322 IADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAM-AVLCMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGL 400 (454)
Q Consensus 322 l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 400 (454)
+.|+...++ ..+..++++..++...........+. ...+.+++...+...........+.+..++-..+.|+
T Consensus 356 laD~~~~~~-------~~~~~~~ll~~gl~~~~~p~~~~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~l~~a~Gl 428 (509)
T KOG2504|consen 356 LADKPGIRA-------LVLFLLTLLIAGLARLFLPFATTYVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEKLSNAYGL 428 (509)
T ss_pred hcCccccch-------HHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhhcchHHHH
Confidence 999998552 34445555555555444444444443 3444444444444443333455566677899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhccCC-chhHHHHHHHHHHHHHHHHHHhc
Q 012902 401 SNTAGVLAGVFGTAATGYILQHGS-WDDVFKVSVGLYLVGTAVWNLFS 447 (454)
Q Consensus 401 ~~~~~~~g~~~~~~~~g~l~~~~g-~~~~~~~~~~~~~~~~~~~~~~~ 447 (454)
...+..++..+||++.|.+.|..+ |...|+.+++..+++..+++...
T Consensus 429 ~l~~~gi~~l~gpPiag~~~d~tg~Y~~~f~~~g~~~~~s~~~~~~~~ 476 (509)
T KOG2504|consen 429 LLLFQGIGALVGPPIAGLLYDITGNYDHAFYFCGLCFLLSAVLLLILR 476 (509)
T ss_pred HHHHhHHHHHcCcccceeeeeccCCeeeehhhcChHHHHHHHHHHHhH
Confidence 999999999999999999999855 99999999999998887666554
No 72
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.8e-31 Score=252.85 Aligned_cols=268 Identities=20% Similarity=0.323 Sum_probs=232.3
Q ss_pred HHhhhchhhhhc-chhhhhhcCCChhhHHHHHHHHHHHHHHhhhhhhhhhccccchHHHHHHHHHHHHHHhhhhhccccc
Q 012902 57 FIVFGQVNMSIA-ILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLG 135 (454)
Q Consensus 57 ~~~~~~~~~~~~-~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~l~~~~~~~~ 135 (454)
....+....+.. +..+.+|.+....+.+++.+++.++++++.+++|.+.||++-.+.+....+++++-.++....+ |
T Consensus 56 ~~~~d~~si~~a~l~g~~edl~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~~ls~~l~~~~~~w~~~~~~~~~~~--s 133 (495)
T KOG2533|consen 56 HAYLDKSSIVNASLSGLKEDLKLVGNQLGVLDTVFYVGYIIGQFPSGLLGDRFPLSKGLSVSGILWGLFGFLTAAVH--S 133 (495)
T ss_pred HHhcchhcchhHHHcCCccccchhhhhhhhHHHHHHHHHHHHHhhHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHh--h
Confidence 566666665543 4447799999999999999999999999999999999999999999999999988888888888 9
Q ss_pred HHHHHHHHHHHHhhcccchhhhhHHHhhhcCccchHHHHHHHHhhHHHHHHhHHhHHHHHh------hccCcchhHHHHh
Q 012902 136 LPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLI------HRFGWPSVFYSFG 209 (454)
Q Consensus 136 ~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~ig~~l~~~l~------~~~gwr~~f~~~~ 209 (454)
++.+++.|++.|+..+..+|....+++.|+.+++|+..+|++.+..++|.++|.+++..+. ...||||.|++.|
T Consensus 134 ~~~~ialr~llGl~es~~wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~gW~~~FiI~G 213 (495)
T KOG2533|consen 134 FPGLIALRFLLGLFESGGWPGVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAGWRWLFIIEG 213 (495)
T ss_pred hHHHHHHHHHHHHHhcccchHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcCCceeehhHHH
Confidence 9999999999999999999999999999999999999999999999999999999998863 3469999999999
Q ss_pred HHHHHHHHHHHHhcCCCCCCCCCCChhhhhhh----hhccc--cCCCCCCcchhHhhcCcchHHHHHHHHHHHHHHHHHH
Q 012902 210 SLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLI----VSSCA--SKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILL 283 (454)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (454)
++.++..++.++.+|+.|.+..-.+++|+... +++.. .+++.+...+++.+++|.+|...+..++.....+++.
T Consensus 214 ~i~~~~gi~~f~~lp~~P~~~~fl~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~~a~~dp~vw~~~l~~~~~~lv~~~~~ 293 (495)
T KOG2533|consen 214 VITLVLGIVVFFFLPDNPSKAWFLTDEEKELVVERLRESPSGGIENKFKWKGFKEALKDPGVWPFSLCYFFLKLVNYGFS 293 (495)
T ss_pred HHHHHHHheEEEEecCChhhccccchHHHHHHHHHHHhccCCCcccccCHHHHHHHHhchhHHHHHHHHHHHhhccccHH
Confidence 99999999999999999986544444442211 11111 1111455677889999999999999999999999999
Q ss_pred hhHHHHHHHHhCCcccchhhHhHHHHHHHHHHHHHHHHHhhhh
Q 012902 284 TWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTL 326 (454)
Q Consensus 284 ~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~ 326 (454)
+|+|.|+++..|+|..+++.+..+..++++++.+++|.++||.
T Consensus 294 ~~lpl~l~~~~~~s~~~a~~ls~~~~~~g~v~~i~ag~lsdr~ 336 (495)
T KOG2533|consen 294 YWLPLYLKSNGGYSELQANLLSTPYDVGGIVGLILAGYLSDRL 336 (495)
T ss_pred HHHHHHHHcCCCcChHHhccccchHHhhhHHHHHHHHHHHHHH
Confidence 9999999996679999999999999999999999999999995
No 73
>PRK09528 lacY galactoside permease; Reviewed
Probab=100.00 E-value=1.2e-30 Score=250.38 Aligned_cols=372 Identities=13% Similarity=0.058 Sum_probs=239.6
Q ss_pred Hhhhchhhhhcchh-hhhhcCCChhhHHHHHHHHHHHHHHhhhhhhhhhccccchHHHHHHHHHHHHHHhhhh---hccc
Q 012902 58 IVFGQVNMSIAILP-MSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTP---VAAK 133 (454)
Q Consensus 58 ~~~~~~~~~~~~~~-i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~l~~---~~~~ 133 (454)
.........+.+|. +.+++|.|..+.|++.+.+.++..++++++|+++||+|||+++..+..+.+++..... .++.
T Consensus 22 ~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (420)
T PRK09528 22 FFFIWSSWFSFFPIWLHDINGLSGTDTGIIFSANSLFALLFQPLYGLISDKLGLKKHLLWIISGLLVLFGPFFIYVFAPL 101 (420)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333444555554 6667999999999999999999999999999999999999999887666555443221 1110
Q ss_pred c---cHHHHHHHHHHHHhhcccchhhhhHHHhhhcCccchHHHHHHHHhhHHHHHHhHHhHHHHHhhccCcchhHHHHhH
Q 012902 134 L---GLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGS 210 (454)
Q Consensus 134 ~---~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~ig~~l~~~l~~~~gwr~~f~~~~~ 210 (454)
. ......+++++.|.+.....+....+..+ . ++++++.+|......++|..++|++++.+.+ .+|++.|++.++
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~-~~~~~~f~~~~~ 178 (420)
T PRK09528 102 LQYNILLGAIVGGIYLGFGFLAGAGAIEAYIER-V-SRRSGFEYGRARMWGSLGWALCAFIAGILFN-INPQINFWLGSG 178 (420)
T ss_pred HHHHHHHHHHHHHHHhhhhhccchhhhhhHHHH-H-HhhccccchhhHHhhhHHHHHHHHHHHHHHh-cCchHhHHHHHH
Confidence 0 11112333444444444334444443332 2 3567788899999999999999999999876 589999999888
Q ss_pred HHHHHHHHHHHhcCCCCCCCCCCChhhhhhhhhccccCCCCCCcchhHhhcCcchHHHHHHHHHHHHHHHHHHhhHHHHH
Q 012902 211 LGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYY 290 (454)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 290 (454)
++++..++.+...+|++++++..+ ++. +++++....+.++.+|||+++...+........+.....+.|.|+
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~-------~~~~~~~~~~~~~~l~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~ 250 (420)
T PRK09528 179 SALILLVLLFFAKPDAPSTAKVAN-ALG-------ANASAVSLKDALALLKLPKFWFLVLYVIGVACFYDVFDQQFPNFF 250 (420)
T ss_pred HHHHHHHHHhcccccccchhhhcc-chh-------cccccccHHHHHHHccCCCeEeehHHHHHHHHHHHHHHHHHHHHH
Confidence 887776665555444333211111 000 001111123345678899888766665555555556666788887
Q ss_pred HHHh---CCcccchhhHhHHHHHHHHHHHHHHHHHhhhhhhcCccchhhHHHHHHHHHHHHHHHHHHhhccChhHHHHH-
Q 012902 291 NQVL---HFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVL- 366 (454)
Q Consensus 291 ~~~~---g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 366 (454)
.+.. +.+..+.+.+.+...+..+++.+..|++.||+++|+... ....+....... ....++.+....
T Consensus 251 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~-------~~~~l~~~~~~l--~~~~~~~~~~~~~ 321 (420)
T PRK09528 251 ASFFATPEQGTRVFGYLNSFQVFLEALIMFFAPFIINRIGAKNALL-------LAGTIMAVRIIG--SGFATGPLEVSIL 321 (420)
T ss_pred HHHHhccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhH-------HHHHHHHHHHHH--HHhcccHHHHHHH
Confidence 7643 456667788888888999999999999999999995422 111111111111 222233333332
Q ss_pred HHHHHHhhhhhhcchhhhhhcccccccchhHHHH-HHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHHHH
Q 012902 367 CMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGL-SNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWNL 445 (454)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 445 (454)
..+.+...............++.+++.+++..+. .+...++|..++|.+.|.+.|..||+..|...+++.++..++...
T Consensus 322 ~~l~g~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~~~G~~~~f~~~~~~~~i~~~~~~~ 401 (420)
T PRK09528 322 KLLHAFEVPFLLVGVFKYITLNFDVRLSATIYLVGFQFAKQLGAVFLSTLAGNLYDSIGFQGTYLILGGIVLLFTLISVF 401 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCccceeeeeeehHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHH
Confidence 2232322222222222333455677788887665 677889999999999999999999999999988887776665555
Q ss_pred hccC
Q 012902 446 FSTG 449 (454)
Q Consensus 446 ~~~~ 449 (454)
..++
T Consensus 402 ~~~~ 405 (420)
T PRK09528 402 TLSG 405 (420)
T ss_pred HhcC
Confidence 5433
No 74
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=100.00 E-value=1.3e-29 Score=241.69 Aligned_cols=368 Identities=14% Similarity=0.069 Sum_probs=256.9
Q ss_pred HHhhhchhhhhcchhhhhhcCCChhhHHHHHHHHHHHHHHhhhhhhhhhccc-----cchH-HHHHHHHHHHHHHhhhhh
Q 012902 57 FIVFGQVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTV-----GGKA-VLGFGVVWWSIATALTPV 130 (454)
Q Consensus 57 ~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-----Grr~-~~~~~~~~~~~~~~l~~~ 130 (454)
..+.........+|.+.++.|.|.+++|++..+... .+.++++|+++||+ |||| .+..+.++.+++..+.++
T Consensus 10 ~~~~~~~~~~~~~~~~l~~~g~~~~~ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l~~~~l~~ 87 (402)
T PRK11902 10 ASGLPLALTSGTLQAWMTVEGLDIQTIGFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAASIAAMAF 87 (402)
T ss_pred HHhhhHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHH--HHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHHHHHHHHh
Confidence 466777777888999888999999999999777665 68999999999999 8776 688888888888888777
Q ss_pred ccc-ccHHHHHHHHHHHHhhcccchhhhhHHHhhhcCccchHHHHHHHHhhHHHHHHhHHhHHHHHhhc-cCcchhHHHH
Q 012902 131 AAK-LGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHR-FGWPSVFYSF 208 (454)
Q Consensus 131 ~~~-~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~ig~~l~~~l~~~-~gwr~~f~~~ 208 (454)
.+. .+++.+++..++.++..+...+...+++.|++|+|+|+++.++...+.++|..+++.+++.+.+. .|||..|++.
T Consensus 88 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~~l~~~~~gw~~~f~i~ 167 (402)
T PRK11902 88 CPPHAALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLALWLADRVLGWGNTYLLM 167 (402)
T ss_pred cCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHHHHHHhcccCHHHHHHHH
Confidence 631 25777888888888888889999999999999999999999999999999999999999999885 5999999998
Q ss_pred hHHHHHHHHHHHHhcCCCCCCCCCCChhhhhhhhhccccCCCCCCcchhHhhcCcchHHHHHHHHHHHHHHHHHHhhHHH
Q 012902 209 GSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPT 288 (454)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (454)
+++.++..+. .+..||+++++++.+ +.++ ....++++++|||.++...+..++..........+.+.
T Consensus 168 a~~~l~~~l~-~~~~~e~~~~~~~~~-~~~~-----------~~~~~~~~l~~~~~~~~~l~~~~l~~~~~~~~~~~~~~ 234 (402)
T PRK11902 168 AGLMLAGALT-TLWAPEPEVPARPPR-SLGE-----------AVVGPLRDFFSRRGAWALLLLIVLYKLGDAFAGSLSTT 234 (402)
T ss_pred HHHHHHHHHH-HHhcCCCcccccccc-hhHH-----------HHHHHHHHHHhCcCHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 8877665443 344565443221111 0000 01335677899999988777766666555444455666
Q ss_pred HHHHHhCCcccchhhHhHHHH-HHHHHHHHHHHHHhhhhhhcCccchhhHHHHHHHHHHHHHHHHHHhhc-cChhHHHHH
Q 012902 289 YYNQVLHFNLTESGLFCVLPW-LTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSH-VDSPAMAVL 366 (454)
Q Consensus 289 ~l~~~~g~s~~~~~~~~~~~~-~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 366 (454)
++.+.+|+++.+.++.....+ ++.+++.++.+++.||+++|+... ............+..... .++.+....
T Consensus 235 ~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~~~l~------~~~~~~~l~~l~~~~~~~~~~~~~~~~~ 308 (402)
T PRK11902 235 FLIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRLGLYRSLM------LFGVLQAVSNLGYWVLAVTPKHLWTMAL 308 (402)
T ss_pred HHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHH------HHHHHHHHHHHHHHHHHhcCCcHHHHHH
Confidence 777778999999999876654 468899999999999999884221 111111111111111111 223233222
Q ss_pred HHHH----HHhhhhhhcchhhhhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHH
Q 012902 367 CMAC----SQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAV 442 (454)
Q Consensus 367 ~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~ 442 (454)
.... ................+ .+..++..++.+....++..+++.+.|.+.|..||+..|...+++.+++.++
T Consensus 309 ~~~~~~~~~g~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~G~l~~~~G~~~~f~~~~~~~~~~~~~ 385 (402)
T PRK11902 309 AIGIENLCGGMGTAAFVALLMALCN---RSFSATQYALLSALASVGRVYVGPTSGYLVEAYGWPGFYLMTVVIALPGLAL 385 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcC---CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHH
Confidence 2211 11111122222222222 2233445566666777888877889999999999999999998888887666
Q ss_pred HHHhcc
Q 012902 443 WNLFST 448 (454)
Q Consensus 443 ~~~~~~ 448 (454)
.....+
T Consensus 386 ~~~~~~ 391 (402)
T PRK11902 386 LWLMRG 391 (402)
T ss_pred HHHHhh
Confidence 554443
No 75
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.4e-29 Score=220.01 Aligned_cols=360 Identities=15% Similarity=0.179 Sum_probs=287.1
Q ss_pred hhchhhhhcchhhhhhcCCChhhHHHHHHHHHHHHHHhhhhhhhhhccccchHHHHHHHHHHHHHHhhhhhcccccHHHH
Q 012902 60 FGQVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFL 139 (454)
Q Consensus 60 ~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~l~~~~~~~~~~~l 139 (454)
-....++|.++++++|+|+|.+..|+++++..++..+.+++..++..|+|.++.+..++++.++|.++-...+ .+.+
T Consensus 26 ~~itsvgPLL~~Ir~~~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~g~er~l~~~Llli~~G~~iR~~~~---~~~L 102 (395)
T COG2807 26 PAITSVGPLLDEIRQDLGLSFSVAGLLTTLPLLAFGLFAPAAPRLARRFGEERSLFLALLLIAAGILIRSLGG---LPLL 102 (395)
T ss_pred hhhhhhhhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhHHHHHHHHHHHHHHHHHHhccc---HHHH
Confidence 3456678899999999999999999999999999999999999999999999999999999999999988774 6778
Q ss_pred HHHHHHHHhhcccchhhhhHHHhhhcCccchHHHHHHHHhhHHHHHHhHHhHHHHHhhcc-CcchhHHHHhHHHHHHHHH
Q 012902 140 LVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRF-GWPSVFYSFGSLGTVWFTV 218 (454)
Q Consensus 140 ~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~ig~~l~~~l~~~~-gwr~~f~~~~~~~~~~~~~ 218 (454)
+.+-.+.|.|.+......+.++.|.|| |+-+..+|++....++|..+++.+.-.+.++. |||......+.++++.+++
T Consensus 103 ~~gt~l~G~gIav~nVLLPslIK~~Fp-k~~~~mtglYs~sl~~~aaLaa~lavpla~~~~gW~~aL~~WAl~allAl~~ 181 (395)
T COG2807 103 FLGTLLAGAGIAVINVLLPSLIKRDFP-KRVGLMTGLYSTSLGAGAALAAALAVPLAQHSGGWRGALGFWALLALLALLI 181 (395)
T ss_pred HHHHHHHHhhHHHHHHhhhHHHHhhcc-cchhhHHhHHHHHHHHHHHHHhhhhhHHHHhhccHHHHHHHHHHHHHHHHHH
Confidence 899999999999999999999999996 78899999999999999999999999998887 7999999999999988776
Q ss_pred HHHhcCCCCCCCCCCChhhhhhhhhccccCCCCCCcchhHhhcCcchHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCcc
Q 012902 219 WLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNL 298 (454)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~ 298 (454)
++.-. .+++..+... +..+...++|+|.-|.+.+...++++.+|....|+|.++.| .|+|+
T Consensus 182 WlPq~-~r~~~~~~~~-----------------~~~~~~~vw~~~~aW~vtLfmGlqS~~~Y~~~~WLP~ili~-~G~sa 242 (395)
T COG2807 182 WLPQA-LREQAASIAT-----------------KLVSVRKVWRSPLAWQVTLFMGLQSLLYYIVIGWLPAILID-RGLSA 242 (395)
T ss_pred Hhhhc-cccccccccc-----------------ccccccccccCchhHHHHHHHHhhHHHHHHHHHHHHHHHHH-cCCCH
Confidence 65432 1111000000 01222348899999999999999999999999999999999 59999
Q ss_pred cchhhHhHHHHHHHHHHHHHHHHHhhhhhhcCccchhhHHHHHHHHHHHHHHHHHHhhccChhHHHHHHHHHHHhhhhhh
Q 012902 299 TESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLCMACSQGTDAFS 378 (454)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (454)
.++|.+.+...+.+++.++....+.+|..+++... .....+...+..-+.+...+..+.. .++++.+.+...
T Consensus 243 ~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~------~~~~~~~l~G~~G~~~~P~~~~~lw--~~llG~G~G~~F 314 (395)
T COG2807 243 AEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLV------VLALLLMLVGLVGLLLAPGQLPILW--ALLLGLGQGGAF 314 (395)
T ss_pred HHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchHH------HHHHHHHHHHHHHHHHhhhhHHHHH--HHHHhCccchHH
Confidence 99999999999999999999999999977665332 1111111222222222233333333 456666655555
Q ss_pred cchhhhhh-cccccccchhHHHHHHHHHHHHHHHHHHHHHHHhcc-CCchhHHHHHHHHHHHHHHHHHHhccCC
Q 012902 379 QSGLYSNH-QDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQH-GSWDDVFKVSVGLYLVGTAVWNLFSTGE 450 (454)
Q Consensus 379 ~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 450 (454)
........ +.-++++.++..|+.+.++++-..+||.+.|++.|. ++|...+...+...++..+.-+...|++
T Consensus 315 ~laL~li~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~l~G~lhDa~gsw~~~~~~l~~~~i~m~i~Gl~a~r~~ 388 (395)
T COG2807 315 PLALTLILLRSSDAAIAAALSGMAQGVGYLLAAFGPWLFGFLHDATGSWSAPLVLLALATLLMLIFGLRAGRNR 388 (395)
T ss_pred HHHHHHHHhhcCChHHHHHHHHHhhhhhHHHHhhhhhhHhHHHHhcCChHHHHHHHHHHHHHHHHHHhhcchhH
Confidence 44444444 334567899999999999999999999999999998 7898888888877777776666655543
No 76
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.98 E-value=1.1e-30 Score=259.19 Aligned_cols=273 Identities=15% Similarity=0.225 Sum_probs=220.1
Q ss_pred HHhhhchhhhhcchhhhhhcCCChhhHHHHHHHHHHHHHHhhhhhhhhhccccchHHHHHHHHHHHHHHhhhhhcc----
Q 012902 57 FIVFGQVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAA---- 132 (454)
Q Consensus 57 ~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~l~~~~~---- 132 (454)
.........+..++.++++|+++..+.|++.+.+.+++.++.++.|++.||+|||+.+.++.++++++++++++.+
T Consensus 44 ~~~~~~g~~~~~l~~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~ll~alphf~~~ 123 (633)
T TIGR00805 44 QGLLYNGLVNSSLTTIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGSFLLSLPHFLSG 123 (633)
T ss_pred HHHHHHHHHHhhchhhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHHHHHHHhChHHhcC
Confidence 5667778888999999999999999999999999999999999999999999999999999999999999987753
Q ss_pred ---------------------------------------------cccHHHHHHHHHHHHhhcccchhhhhHHHhhhcCc
Q 012902 133 ---------------------------------------------KLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPV 167 (454)
Q Consensus 133 ---------------------------------------------~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~ 167 (454)
+..+..++++|+++|+|.+..++...+++.|++|+
T Consensus 124 ~y~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~ 203 (633)
T TIGR00805 124 RYSYSTTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDDFAKS 203 (633)
T ss_pred CccccccccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhccCCc
Confidence 01245678999999999999999999999999999
Q ss_pred cchHHHHHHHHhhHHHHHHhHHhHHHHHhhcc----------------------CcchhHHHHhHHHHHHHHHHHHhcCC
Q 012902 168 AERSRSLALVYSGMYLGSVTGLAFSPFLIHRF----------------------GWPSVFYSFGSLGTVWFTVWLSKAHS 225 (454)
Q Consensus 168 ~~rg~~~~~~~~~~~~g~~ig~~l~~~l~~~~----------------------gwr~~f~~~~~~~~~~~~~~~~~~~~ 225 (454)
++|+++++++..+..+|.++|+++++.+.+.+ +||..|++.+++.++..++.+++.++
T Consensus 204 ~~~~~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l~~l~~v~l~~~p~~ 283 (633)
T TIGR00805 204 KNSPLYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLICGGVALLTSIPFFFFPKA 283 (633)
T ss_pred cccHHHHHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHhCccc
Confidence 99999999999999999999999999988643 27777888888888776655544333
Q ss_pred CCCCCCCCCh--hhhhhhhhccccC-C------CCCCcchhHhhcCcchHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCC
Q 012902 226 SPAEDPQLRP--AEKKLIVSSCASK-E------PVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHF 296 (454)
Q Consensus 226 ~~~~~~~~~~--~~~~~~~~~~~~~-~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~ 296 (454)
.|++..+.+. .+.+.......+. . ......++.+++||.++...+..++.....+++.+|+|.|+++.+|+
T Consensus 284 lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~lP~yl~~~~g~ 363 (633)
T TIGR00805 284 LPKEGKRVNVDVHETEKLEKSEDKSRKKNSDITKDFPKIIKRLLCNPIYMLVILAQVIDSLAFNGYITFLPKYLENQYGI 363 (633)
T ss_pred cCCcccccchhhhhhhcccccccccchhhhhhHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 3322111110 0000000000000 0 00113456789999999999999999999999999999999999999
Q ss_pred cccchhhHhHHHHH-HHHHHHHHHHHHhhhhhhc
Q 012902 297 NLTESGLFCVLPWL-TMAFSANLGGWIADTLVSK 329 (454)
Q Consensus 297 s~~~~~~~~~~~~~-~~~~~~~~~g~l~dr~~~~ 329 (454)
++.+++++.....+ +.+++.+++|+++||++.+
T Consensus 364 s~~~ag~l~~~~~i~~~~vG~~l~G~l~~r~~~~ 397 (633)
T TIGR00805 364 SSAEANFLIGVVNLPAAGLGYLIGGFIMKKFKLN 397 (633)
T ss_pred cHHHHHHHhhhhhhhHHHHHHhhhhheeeeeccc
Confidence 99999999887776 5688999999999999855
No 77
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.98 E-value=1.9e-29 Score=240.26 Aligned_cols=366 Identities=13% Similarity=0.034 Sum_probs=249.6
Q ss_pred Hhhhchhhhhcchh-hhhhcCCChhhHHHHHHHHHHHHHHhhhhhhhhhccccchHHHHHHHHHHHHHHhhh---hhccc
Q 012902 58 IVFGQVNMSIAILP-MSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALT---PVAAK 133 (454)
Q Consensus 58 ~~~~~~~~~~~~~~-i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~l~---~~~~~ 133 (454)
.......+.+.+|. +.+++|.|+.+.|++.+++.++..+++++.|+++||+|||+.+..+....+++.... .+.+.
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (396)
T TIGR00882 14 YFFIMSAYFPFFPIWLHDVNGLSKTDTGIVFSCISLFSILFQPLFGLISDKLGLKKHLLWIISGLLVLFAPFFIYVFGPL 93 (396)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhhhH
Confidence 44455566666665 566799999999999999999999999999999999999999988776665544332 22210
Q ss_pred ---ccHHHHHHHHHHHHhhcccchhhhhHHHhhhcCccchHHHHHHHHhhHHHHHHhHHhHHHHHhhccCcchhHHHHhH
Q 012902 134 ---LGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGS 210 (454)
Q Consensus 134 ---~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~ig~~l~~~l~~~~gwr~~f~~~~~ 210 (454)
..+..+.+.|++.|++.+...+....+..|.. +++++.+|......++|.++||.+++.+.+ .+||..|++.+.
T Consensus 94 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~--~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~-~~~~~~f~~~~~ 170 (396)
T TIGR00882 94 LQSNILVGAIVGGLYLGFVFSAGAGAIEAYIEKVS--RNSNFEYGKARMFGCVGWALCASIAGILFS-IDPQIVFWLGSG 170 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHhh--hhcccccchhhhhcccHHHHHHHHHhhhhc-cCchHHHHHHHH
Confidence 02344567789999998888888888877754 334567788888889999999999998865 599999999988
Q ss_pred HHHHHHHHHHHhcCCCCCCCCCCChhhhhhhhhccccCCCCCCcchhHhhcCcchHHHHHHHHHHHHHHHHHHhhHHHHH
Q 012902 211 LGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYY 290 (454)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 290 (454)
+.++..++.+...||+++++++ +++. +.++++.+..+.++.+|||+++...+..+.....+.....+.|.|+
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~-~~~~-------~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~y~ 242 (396)
T TIGR00882 171 FALILMLLLMFAKPKAPSSATV-ANAL-------GANASAFSLKLALELFRQRKFWMFVLYVVGVACVYDVFDQQFANFF 242 (396)
T ss_pred HHHHHHHHHHHhCCCCchhhhh-hccc-------ccccCCCCHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8887766655544443322111 0000 0001111234567789999988777776666666666777888888
Q ss_pred HHHh---CCcccchhhHhHHHHHHHHHHHHHHHHHhhhhhhcCccchhhHHHHHHHHHHHHHHHHHHhhccChhHHHH-H
Q 012902 291 NQVL---HFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAV-L 366 (454)
Q Consensus 291 ~~~~---g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 366 (454)
++.+ +.+....+...+...+...++....+++.||+++|+... ++....+.........++.+... .
T Consensus 243 ~~~~~~~~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~~~l~---------~~~~l~~l~~~~~~~~~~~~~~~~~ 313 (396)
T TIGR00882 243 TSFFATPQQGTRVFGYVTTMGELLNALIMFCAPLIINRIGAKNALL---------IAGTIMSVRIIGSSFATTALEVVIL 313 (396)
T ss_pred HHhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHH---------HHHHHHHHHHHHHHhcCChHHHHHH
Confidence 8864 445566788888888889999999999999999995422 11111111111212223333322 2
Q ss_pred HHHHHHhhhhhhcchhhh-hhcccccccchhHHHH-HHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHHH
Q 012902 367 CMACSQGTDAFSQSGLYS-NHQDIAPRYSGVLLGL-SNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWN 444 (454)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~-~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~ 444 (454)
..+.+.+.. ........ ..+..+++.+++..+. .+....+|+.++|.+.|.+.|..||+.+|.+.+++.++......
T Consensus 314 ~~l~g~~~~-~~~~~~~~~~~~~~~~~~~at~~~~~~~~~~~lg~~~~~~l~G~l~~~~G~~~~f~~~~~~~~i~~~~~~ 392 (396)
T TIGR00882 314 KMLHAFEVP-FLLVGCFKYITSQFDVRLSATIYLIGFQFAKQLAMIFLSTLAGNMYDSIGFQGAYLVLGCIVLLFTLISV 392 (396)
T ss_pred HHHHHHHHH-HHHHHHHHHHHHhCCcceEEEeehHHHHHHHHHHHHHHHHhHHHHHHhcccHHHHHHHHHHHHHHHHHHH
Confidence 222222221 11111222 2233455667776665 67889999999999999999999999999998888877665543
No 78
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.98 E-value=3.9e-29 Score=233.66 Aligned_cols=404 Identities=14% Similarity=0.091 Sum_probs=278.1
Q ss_pred HHHHHHHHHHHHHHhhhchhhhhcchhh--------hhhcC--CChhh----HHHHHHHHHHHHHHhhhhhhhhhccccc
Q 012902 45 IISLCVGNFEQIFIVFGQVNMSIAILPM--------SAEFN--WNPAT----VGLIQSSFFWGYLLTQIAGGIWADTVGG 110 (454)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i--------~~~~~--~s~~~----~g~~~s~~~~~~~~~~~~~g~l~dr~Gr 110 (454)
.+.....++..+-.++....+++..+.+ .+.+| .++++ .+.+.+++.+|.++|++..|.++||+||
T Consensus 10 ~~~~~~~~~gsf~~Gy~~~~iNap~~~i~~f~n~t~~~r~g~~~s~~~~~~lwS~~vs~f~iG~~~Gs~~~~~la~~~GR 89 (485)
T KOG0569|consen 10 LLAVIVATLGSFQFGYNIGVVNAPQELIKSFINETLIERYGLPLSDSTLDLLWSLIVSIFFIGGMIGSFSSGLLADRFGR 89 (485)
T ss_pred HHHHHHHHHhchhhhhhheecCchHHHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 3333333333234556655655544333 23445 34433 4667889999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHhhhhhccc-ccHHHHHHHHHHHHhhcccchhhhhHHHhhhcCccchHHHHHHHHhhHHHHHHhHH
Q 012902 111 KAVLGFGVVWWSIATALTPVAAK-LGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGL 189 (454)
Q Consensus 111 r~~~~~~~~~~~~~~~l~~~~~~-~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~ig~ 189 (454)
|..+....++..++.++..++.. .+++++.++|++.|+..|.......-++.|..|++.||..-...+.+..+|..+|.
T Consensus 90 K~~l~~~~~l~~~~~~~~~~s~~~~~~e~li~GR~i~Gl~~gl~~~~~pmyl~E~sP~~~RG~~g~~~~~~~~~g~ll~~ 169 (485)
T KOG0569|consen 90 KNALLLSNLLAVLAALLMGLSKSAPSFEMLILGRLIVGLACGLSTGLVPMYLTEISPKNLRGALGTLLQIGVVIGILLGQ 169 (485)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhHHHHHHHHHHHhhcChhhhccHHHHHHHHHHHHHHHHHH
Confidence 99999998888877777655431 17899999999999999999999999999999999999999999999999999997
Q ss_pred hHHH--HHhhccCcchhHHHHhHHHHHHHHHHHHhcCCCCCCCCC--CChhhh-----------------hhhhhc--cc
Q 012902 190 AFSP--FLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQ--LRPAEK-----------------KLIVSS--CA 246 (454)
Q Consensus 190 ~l~~--~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-----------------~~~~~~--~~ 246 (454)
.++. .+.+...|++.+....+++++..+ .+.+.||+|+.--. .++++. +...++ .+
T Consensus 170 ~~~l~~ilGt~~~W~~l~~~~~i~~~~~l~-~l~~~PESPk~Ll~~k~~~~~A~~sl~~y~G~~~~~~~~e~~~~e~~~~ 248 (485)
T KOG0569|consen 170 VLGLPSLLGTEDLWPYLLAFPLIPALLQLA-LLPFLPESPKYLLIKKGDEEEARKALKFYRGKEDVEAEIEEMLREIEEE 248 (485)
T ss_pred HHccHHhcCCCcchHHHHHHHHHHHHHHHH-HHhcCCCCcchHHHHcCCHHHHHHHHHHHhCCCcchhHHHHHHHHHHHh
Confidence 6654 333455799999988887777744 45568999974211 111110 000111 11
Q ss_pred cCCCCCCcchhHhhcCcchHHHHHHHHHHH-----HHHHHHHhhHHHHHHHHhCCcccchhhHhHHHHHHHHHHHHHHHH
Q 012902 247 SKEPVKTIPWGLILSKPPVWALIVSHFCHN-----WGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGW 321 (454)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~ 321 (454)
+.++++..+++++++||..+.-....+... .+.+....|...++++ .|+++.++-+.....+....+.++++.+
T Consensus 249 ~~~~~~~~sl~~~~~~~~lR~~~~i~~~v~~~qq~sGi~ai~~Yst~i~~~-aG~~~~~a~~an~~~g~v~~~~t~~~~~ 327 (485)
T KOG0569|consen 249 ELEKKKQISLRQLLKNPTLRRPLLIGIVVSFAQQFSGINAIFFYSTSIFKT-AGFTPEEAQYANLGIGIVNLLSTLVSPF 327 (485)
T ss_pred ccccccCCcHHHHhcCcchhHHHHHHHHHHHHHHhcCcceeHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 222235678899999987775433333322 2345566677777777 5999999999999999999999999999
Q ss_pred HhhhhhhcCccchhhHHHHHHHHHHHHHHHHHHhhccChhH--H-HHHHHHHHHhhhhhhcchhhhhh-cccccccchhH
Q 012902 322 IADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPA--M-AVLCMACSQGTDAFSQSGLYSNH-QDIAPRYSGVL 397 (454)
Q Consensus 322 l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 397 (454)
+.||.|||++...+. ....+..+............+.+. . ....+....++.....|...... +.++++.|+.+
T Consensus 328 lid~~gRRpLll~~~--~~~~~~~~~~~~~~~l~~~~~~~~~y~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~R~aa 405 (485)
T KOG0569|consen 328 LIDRLGRRPLLLISL--SLMAVALLLMSIALFLSNSFGSWLSYLCIAAIFLFIISFAIGPGPIPWFIGAELFPQSARSAA 405 (485)
T ss_pred HHHhcCCcHHHHHHH--HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhcCCCchhHHHHHHhCCccchHHH
Confidence 999999997655443 111112222222222222221111 1 22233333344444445555555 45556799999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHHHHhccCCccc
Q 012902 398 LGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWNLFSTGEKVV 453 (454)
Q Consensus 398 ~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 453 (454)
+++...+..+..++-......+.+..|. ..|....+.+++..+..+...+|+|.+
T Consensus 406 ~s~~~~~~w~~~fiv~~~fp~l~~~~g~-~~filF~i~~~~~~i~~~~~lPETkgr 460 (485)
T KOG0569|consen 406 QSVATAVNWLSNFIVGFAFPPLQNVIGP-YVFILFVIPLAIFLIYLYRYLPETKGR 460 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcc-hhhHHHHHHHHHHHHHHHHhCcccCCC
Confidence 9999999999999999999999998776 778888888888888777777777654
No 79
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.98 E-value=8.3e-30 Score=273.73 Aligned_cols=370 Identities=13% Similarity=0.067 Sum_probs=259.0
Q ss_pred HHhhhchhhhhcc-hhhhhhcCCCh-hhHHHHHHHHHHHHHHhhhhhhhhhccccchHHHHH---HHHHHHHHHhhhhhc
Q 012902 57 FIVFGQVNMSIAI-LPMSAEFNWNP-ATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGF---GVVWWSIATALTPVA 131 (454)
Q Consensus 57 ~~~~~~~~~~~~~-~~i~~~~~~s~-~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~---~~~~~~~~~~l~~~~ 131 (454)
.+.+....+.... ..+..+.+.+. ...++..+++.+.+.++++++|+++||+|||+++.. ..++..+..+.+...
T Consensus 26 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~~~~~~~~~~~~~~~~~~~~~~ 105 (1140)
T PRK06814 26 NDNFLKNALVILILYGLSGALGAYNNALVTLAGAVFILPFFIFSALAGQLADKYDKAKLAKILKFAEIGIAALAIYGFHL 105 (1140)
T ss_pred HHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHhhhHHhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444444333333 23444444433 457888999999999999999999999999997533 222333333333344
Q ss_pred ccccHHHHHHHHHHHHhhcccchhhhhHHHhhhcCccchHHHHHHHHhhHHHHHHhHHhHHHHHhhccCcchhHHHHhHH
Q 012902 132 AKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSL 211 (454)
Q Consensus 132 ~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~ig~~l~~~l~~~~gwr~~f~~~~~~ 211 (454)
+ ++++++++|+++|++.+...|...+++.|++|+++|++++|+.+.+.++|.++||++++++.+..+|++.|...++.
T Consensus 106 ~--s~~~l~~~~~l~gi~~a~~~p~~~a~l~~~~~~~~~~~a~~~~~~~~~ig~~igp~l~g~l~~~~~~~~~~~~~~~~ 183 (1140)
T PRK06814 106 N--SVPLLFAALFLMGIHSALFGPIKYSILPDHLNKDELLGANALVEAGTFIAILLGTIIGGLATISGNFVILVALLMGI 183 (1140)
T ss_pred h--hHHHHHHHHHHHHHHHHhhchHHHHhhHhhcCccccchhhHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHH
Confidence 7 89999999999999999999999999999999999999999999999999999999999999999999999544444
Q ss_pred HHHHHHHHHHhcCCCCCCCCCCChhhhhhhhhccccCCCCCCcchhHhhcCcchHHHHHHHHHHHHHHHHHHhhHHHHHH
Q 012902 212 GTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYN 291 (454)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 291 (454)
.++. ++..+..++.++.+...+..... . ......++.+.++|.++...+..++.++....+..++|.|++
T Consensus 184 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 253 (1140)
T PRK06814 184 AVLG-WLASLFIPKTGNAAPDLKIDRNI-I--------RSTITLLKYAKADKRIWLAILGISWFWLVGAVVLSQLPLLAK 253 (1140)
T ss_pred HHHH-HHHHhhCCCCCCCCCCCeeccch-H--------HHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhHHHHH
Confidence 4444 44444455543322211110000 0 000235677889999999988888888888888899999999
Q ss_pred HHhCCcccchhhHhHHHHHHHHHHHHHHHHHhhhhhhcCccchhhHHHHHHHHHHHHHHH-------------HH-Hhhc
Q 012902 292 QVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFF-------------LT-QLSH 357 (454)
Q Consensus 292 ~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~-~~~~ 357 (454)
+.+|.++.+.+.+.+...++.+++.+..|++.||..+++....+. ....+..+..... .. ....
T Consensus 254 ~~~g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~~~~~~~~~~~--~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 331 (1140)
T PRK06814 254 ETLGGDENVATLFLAVFSVGVAVGSFLASKLSEGRITLLYVPIGA--LLMGLFGLDLAFASSSVPAEPAQLKSILVFLSK 331 (1140)
T ss_pred HHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCceeeeeehHHH--HHHHHHHHHHHhcccccccccccccchhhhhcc
Confidence 999999999999999999999999999999998877665433221 1111111111100 00 0001
Q ss_pred cChhHHHHHHHHHHHhhhhhhcchhhhhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHhcc-CCchhHHHHHHHHH
Q 012902 358 VDSPAMAVLCMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQH-GSWDDVFKVSVGLY 436 (454)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~-~g~~~~~~~~~~~~ 436 (454)
.+.+...+..++++.+.+....+......+..+++.+|+++|+.++..+++..+++.+.|.+.+. .++...+++.+++.
T Consensus 332 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~G~v~g~~~~~~~~~~~ig~~~~g~l~~~~~~~~~~~~~~~~~~ 411 (1140)
T PRK06814 332 RHGWRILIDLFGLAAAGGLYIVPLFAALQAWANPAHRARVIAANNVLNAAFMVAGTIILALLQALGFSIPWIILFIALAN 411 (1140)
T ss_pred cccHHHHHHHHHHHHHHHHhHHHHHHHHHhhCCcccceeeeHHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHH
Confidence 22333334444555555555555555556777888999999999999999999999999999854 56776666555544
Q ss_pred HHHH
Q 012902 437 LVGT 440 (454)
Q Consensus 437 ~~~~ 440 (454)
++..
T Consensus 412 ~~~~ 415 (1140)
T PRK06814 412 LIVA 415 (1140)
T ss_pred HHHH
Confidence 4443
No 80
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.98 E-value=5.7e-29 Score=237.44 Aligned_cols=364 Identities=12% Similarity=0.055 Sum_probs=246.9
Q ss_pred Hhhhchhh-hhcchhhhhhcCCChhhHHHHHHHHHHHHHHhhhhhhhhhccccc-hHHHHHHHHHHHHHHhhhhhccccc
Q 012902 58 IVFGQVNM-SIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGG-KAVLGFGVVWWSIATALTPVAAKLG 135 (454)
Q Consensus 58 ~~~~~~~~-~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Gr-r~~~~~~~~~~~~~~~l~~~~~~~~ 135 (454)
.+...... ++..+.+.+++|.+.+++|++.+++.++..++++++|+++||+|| |+++..+.++.+++..+..+.+ +
T Consensus 14 ~~~~~~~~~~~l~~~l~~~~g~s~~~iGl~~a~~~~~~~i~~~~~g~l~dr~g~~r~~~~~~~~~~~~~~~~~~~~~--~ 91 (418)
T TIGR00889 14 QWFIWGSWLVTLGSYMSKTLHFSGAEIGWVYSSTGIAAILMPILVGIIADKWLSAQKVYAVCHFAGALLLFFAAQVT--T 91 (418)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhc--C
Confidence 44444444 455566788899999999999999999999999999999999965 7788888888888888888888 8
Q ss_pred HHHHHHHHHHHHhhcccchhhhhHHHh--------hhcCccchHHHHHHHHhhHHHHHHhHHhHHHHHhhccCcchhHHH
Q 012902 136 LPFLLVVRVFMGIGEGVAMPAMNNILS--------KWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYS 207 (454)
Q Consensus 136 ~~~l~~~r~l~G~~~g~~~~~~~~~i~--------~~~~~~~rg~~~~~~~~~~~~g~~ig~~l~~~l~~~~gwr~~f~~ 207 (454)
++.+++.|++.|++.+...+...+... |......|.|..| .+|.++||.+++.+....+|+ +|++
T Consensus 92 ~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~~r~~G------~lG~~ig~~l~g~l~~~~~~~-~f~~ 164 (418)
T TIGR00889 92 PAGMFPVLLANSLAYMPTIALTNSISYANLPQAGLDVVTDFPPIRVMG------TIGFIAAMWAVSLLDIELSNI-QLYI 164 (418)
T ss_pred HHHHHHHHHHHHHHHccHHHHHHHHHHHHHhhcCCCchhcCCCeeeeh------hHHHHHHHHHHHHhcccchhH-HHHH
Confidence 999999999999988777776665532 2232234555555 478888898888874333344 4666
Q ss_pred HhHHHHHHHHHHHHhcCCCCCCCCCCChhhhhhhhhccccCCCCCCcchhHhhcCcchHHHHHHHHHHHHHHHHHHhhHH
Q 012902 208 FGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMP 287 (454)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (454)
.+++.++..+. .+..||+|+++++.+.+.++ ....+.++.+|+|+++.+.+..++..........+.|
T Consensus 165 ~~~~~~~~~~~-~~~~~e~~~~~~~~~~~~~~-----------~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (418)
T TIGR00889 165 TAGSSALLGVF-ALTLPDIPVAKSTAKMSIKV-----------MLGLDAFILFKNKRMAIFFFFSMLLGAPLQITNIFGN 232 (418)
T ss_pred HHHHHHHHHHH-HhcCCCCCCCccccccCHHH-----------HhhhhHHHHhcCCCeeeHHHHHHHHHhHHHHHHHhHH
Confidence 66666655444 44566654322211110000 0012345678999988888887777776666778889
Q ss_pred HHHHHHhCCcc--------cchhhHhHHHHHHHHHHHHHHHHHhhhhhhcCccchhhHHHHHHHHHHHHHHHHHHhhccC
Q 012902 288 TYYNQVLHFNL--------TESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVD 359 (454)
Q Consensus 288 ~~l~~~~g~s~--------~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (454)
.|+++ .|.++ ...+...+...+..+++.+..|++.||+|+|+.. ....................
T Consensus 233 ~~~~~-~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l-------~~~~~~~~v~~~l~~~~~~~ 304 (418)
T TIGR00889 233 GFLHE-FGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFGIKKVM-------LLSLVAWALRFGFFAYGDPE 304 (418)
T ss_pred HHHHH-hcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHH-------HHHHHHHHHHHHHHHHcCcc
Confidence 89887 46554 5568888999999999999999999999998432 22221111111122211111
Q ss_pred h--hHH-HHHHHHHHHhhhhhhcchhhhhhcccccccchhHHHHHH-HHHHHHHHHHHHHHHHHhcc------CCchhHH
Q 012902 360 S--PAM-AVLCMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSN-TAGVLAGVFGTAATGYILQH------GSWDDVF 429 (454)
Q Consensus 360 ~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~g~~~~~~~~g~l~~~------~g~~~~~ 429 (454)
. .+. .....+.+.+.............+..|+++|+++.|+.+ ....+|..+||.+.|.+.|+ .||+..|
T Consensus 305 ~~~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~f 384 (418)
T TIGR00889 305 YFGYALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTMW 384 (418)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHHHH
Confidence 1 122 222333333333333333333445566689999999997 56789999999999999998 3588999
Q ss_pred HHHHHHHHHHHHHHHHhccCC
Q 012902 430 KVSVGLYLVGTAVWNLFSTGE 450 (454)
Q Consensus 430 ~~~~~~~~~~~~~~~~~~~~~ 450 (454)
.+.+++.+++.++..++.+++
T Consensus 385 ~~~~~~~~i~~~l~~~~~~~~ 405 (418)
T TIGR00889 385 LFFAGYIAILAVLFMIFFKYS 405 (418)
T ss_pred HHHHHHHHHHHHHHHHHhCCc
Confidence 888888777776666655443
No 81
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.98 E-value=5e-29 Score=240.12 Aligned_cols=369 Identities=17% Similarity=0.161 Sum_probs=280.4
Q ss_pred HHhhhchhhhhcchhhhhhcCCChhhHHHHHHHHHHHHHHhhhhhhhhhccccchHHHHHHHHHHHHHHhhhhh---ccc
Q 012902 57 FIVFGQVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPV---AAK 133 (454)
Q Consensus 57 ~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~l~~~---~~~ 133 (454)
++.++..+.....+.+..+..-|+..++++..+..+...+.++++|.++||++||++++.+.++.++..+..++ ...
T Consensus 21 iS~lG~~~~~va~~wlv~~lt~S~~~valv~~a~~LP~~Llsl~aG~laDr~drrrili~~~~~~~~~~~~L~~l~~~~~ 100 (524)
T PF05977_consen 21 ISNLGDWMQTVALAWLVTQLTGSPLMVALVQAASTLPILLLSLFAGALADRFDRRRILILSQLLRALVALLLAVLAFFGL 100 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHHHhCc
Confidence 45566666777777777777889999999999999999999999999999999999999998877665544432 233
Q ss_pred ccHHHHHHHHHHHHhhcccchhhhhHHHhhhcCccchHHHHHHHHhhHHHHHHhHHhHHHHHhhccCcchhHHHHhHHHH
Q 012902 134 LGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGT 213 (454)
Q Consensus 134 ~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~ig~~l~~~l~~~~gwr~~f~~~~~~~~ 213 (454)
.+.+.+++.-++.|++.+...|+.++++.|.+|+|+..++.++.+...++...+||.++|.+....|-.+.|.+.++..+
T Consensus 101 ~~~~~Ll~~~fl~g~~~a~~~PA~~A~ip~lV~~~~L~~A~al~s~~~niar~iGPalgG~Lva~~G~~~~f~inalsfl 180 (524)
T PF05977_consen 101 LSPWLLLILTFLLGIGSAFFNPAWQAIIPELVPKEDLPAANALNSISFNIARIIGPALGGILVAFFGAAAAFLINALSFL 180 (524)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHhhHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 37899999999999999999999999999999999999999999999999999999999999998999999999887666
Q ss_pred HHHHHHHHhcCCCCCCCCCCChhhhhhhhhccccCCCCCCcchhHhhcCcchHHHHHHHHHHHHHHHHHHhhHHHHHHHH
Q 012902 214 VWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQV 293 (454)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 293 (454)
+.........++.++++ ..++.-. ...+..++.+.++|.+....+..++.++........+|.+.++.
T Consensus 181 ~~i~~l~~~~~~~~~~~-~~~e~~~-----------~~l~~G~ryv~~~~~l~~~l~~~~~~~l~~~a~~aLlPl~a~~~ 248 (524)
T PF05977_consen 181 ISILALLRWKPPPPPSS-LPRERFF-----------SALREGLRYVRSSPPLRSVLLRSFLFNLFASAVWALLPLFARDV 248 (524)
T ss_pred HHHHHHHHccccccccc-cchhhhh-----------hhHHHHHHHHhcchHHHHHHHHHHHHHHhhhHHHHhhhHHHHHH
Confidence 65444444333222111 1111000 00133455566778877776666666666667778899999999
Q ss_pred hCCcccchhhHhHHHHHHHHHHHHHHHHHhhhhhhcCccchhhHHHHHHHHHHHHHHHHHHhhccChhHHHHHHH-HHHH
Q 012902 294 LHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLCM-ACSQ 372 (454)
Q Consensus 294 ~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 372 (454)
+|.++...|++.+..+++.++|.++.+++.+|+++++.. ..+.+..+.........++.+.....+ +.+.
T Consensus 249 l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~~~~~lv---------~~~~~~~a~~~~~lal~~~~~~~~~~l~l~G~ 319 (524)
T PF05977_consen 249 LGGGASGYGLLLAAFGVGAILGALLLPRLRRRLSSRRLV---------LLASLLFALALLLLALSPSFWLALIALFLAGA 319 (524)
T ss_pred hCCcHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhh---------HHHHHHHHHHHHHHhcchHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999988877422 223333333333444444444444333 3344
Q ss_pred hhhhhhcchhhhhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHHHHh
Q 012902 373 GTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWNLF 446 (454)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 446 (454)
+................|++.||++++++++....+..+|..+.|.+.|..|.+.++.+.++..+++.++....
T Consensus 320 ~~~~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~g~~~lGsll~G~la~~~g~~~al~~a~~~lll~~~~~~~~ 393 (524)
T PF05977_consen 320 AWIIANSSLNTLVQLSVPDWVRGRVFSIYQMVFFGGMPLGSLLWGFLADHFGVRTALLIAGAALLLSALIALRF 393 (524)
T ss_pred HHHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHh
Confidence 43443434444555667778999999999999999999999999999999999999988887777666665544
No 82
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.97 E-value=2.3e-29 Score=236.40 Aligned_cols=322 Identities=13% Similarity=0.027 Sum_probs=231.9
Q ss_pred hhhhhcchhhhhhcCCChhhHHHHHHHHHHHHHHhhhhhhhhhccc-----cchHH-HHHHHHHHHHHHhhhhhccc-cc
Q 012902 63 VNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTV-----GGKAV-LGFGVVWWSIATALTPVAAK-LG 135 (454)
Q Consensus 63 ~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-----Grr~~-~~~~~~~~~~~~~l~~~~~~-~~ 135 (454)
...++..|.+.+|+|+|.+++|++.+. .+...+ .+++|+++||+ ||||. +..+.++.++...+.++.+. .+
T Consensus 5 ~~~~~~~~~~~~~~g~s~~~~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~~~~~ 82 (356)
T TIGR00901 5 GLVGNTLPYWLRSKNVSLKTIGFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFLVPSTD 82 (356)
T ss_pred hhHHhHHHHHHHHcCCCHHHHHHHHHH-HHHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcCCcchh
Confidence 456778899999999999999999755 555555 99999999998 89987 56777778777777777631 15
Q ss_pred HHHHHHHHHHHHhhcccchhhhhHHHhhhcCccchHHHHHHHHhhHHHHHHhHHhHHHHHhhccC--------cchhHHH
Q 012902 136 LPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFG--------WPSVFYS 207 (454)
Q Consensus 136 ~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~ig~~l~~~l~~~~g--------wr~~f~~ 207 (454)
.+.+....++.+++.+...+...+++.|++|+|+|+++.++...+.++|.++++.+++.+.++.| ||..|++
T Consensus 83 l~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~~~~~~wr~~f~i 162 (356)
T TIGR00901 83 LPLLAGLAFLIAFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLASPEFANTGLITLWGYIFFW 162 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccHHHHHH
Confidence 66777888888998888999999999999999999999999999999999999999999988888 9999999
Q ss_pred HhHHHHHHHHHHHHhcCCCCCCCCCCChhhhhhhhhccccCCCCCCcchhHhhcCcc---hHHHHHHHHHHHHHHHHHHh
Q 012902 208 FGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPP---VWALIVSHFCHNWGTFILLT 284 (454)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 284 (454)
.++..++..+..++..||+++++++ ++++++ ..+.++++++++|. ++...+..++....++....
T Consensus 163 ~ai~~l~~~~~~~~~~~e~~~~~~~-~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (356)
T TIGR00901 163 TALLILPGLLVTLFLAKEPQEDASV-PKPLTQ-----------AVLKPIREFFQRKNMIQALLLLLLIVLYKLGDSAATV 230 (356)
T ss_pred HHHHHHHHHHHHHHhccCCCccccc-chhHHH-----------HHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHH
Confidence 8887777655555455654322111 111100 01234566777776 67677777777788888899
Q ss_pred hHHHHHHHHhCCcccchhhHhHHHH-HHHHHHHHHHHHHhhhhhhcCccchhhHHHHHHHHHHHHHHHHHH-hh-cc---
Q 012902 285 WMPTYYNQVLHFNLTESGLFCVLPW-LTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQ-LS-HV--- 358 (454)
Q Consensus 285 ~~~~~l~~~~g~s~~~~~~~~~~~~-~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~--- 358 (454)
+.|.|+++ +|+++.+.+......+ +..+++.++++++.||+|+|+... ....+......... .. ..
T Consensus 231 ~~~~~l~~-~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~-------~~~~~~~~~~~~~~~~~~~~~~~ 302 (356)
T TIGR00901 231 LTTLFLLD-MGFSKEEIALVAKINGLLGAILGGLIGGIIMQPLNILYALL-------LFGIVQALTNAGFVWLASNGHHD 302 (356)
T ss_pred HHHHHHHH-cCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhHHHHHH-------HHHHHHHHHHHHHHHHHhcCccc
Confidence 99999998 8999999998887766 577889999999999999885322 11111111111111 11 11
Q ss_pred ----ChhHHHHHHHHH-HHhhhhhhcchhhhhhcccccccchhHHHHHHHHHH
Q 012902 359 ----DSPAMAVLCMAC-SQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGV 406 (454)
Q Consensus 359 ----~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 406 (454)
+..+......++ +.+.+...........+..|+++||+..|+.+...+
T Consensus 303 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~ 355 (356)
T TIGR00901 303 GITFPHLLMLFLTITLEAVTGGLGTVAFVAFLSKLSNPKFGATQMALLSSLSA 355 (356)
T ss_pred ccccchHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHh
Confidence 222333333333 444444444445555566778899999999887764
No 83
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.97 E-value=9.7e-29 Score=219.67 Aligned_cols=359 Identities=14% Similarity=0.170 Sum_probs=275.9
Q ss_pred HHhhhchhhhhcchhhhhhcCCChhhHHHHHHHHHHHHHHhhhhhhhhhccccchHHHHHHHHHHHHHHhhhh---hccc
Q 012902 57 FIVFGQVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTP---VAAK 133 (454)
Q Consensus 57 ~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~l~~---~~~~ 133 (454)
..++......+.+|++++.|+++..|.+++..++..++.+.+++.|++.+|+|+|+-++.|+.++++++.++. ...
T Consensus 24 l~G~~~~l~diLip~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~gi~lgL~l~avg~~lF~pAa~~~- 102 (422)
T COG0738 24 LWGFITCLNDILIPHLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYKAGIVLGLLLYAVGAALFWPAASSK- 102 (422)
T ss_pred HHHHHhhcchhhHHHHHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhhhhhh-
Confidence 5677778889999999999999999999999999999999999999999999999999999999999999984 444
Q ss_pred ccHHHHHHHHHHHHhhcccchhhhhHHHhhhcCccchHHHHHHHHhhHHHHHHhHHhHHHHHhhc---------------
Q 012902 134 LGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHR--------------- 198 (454)
Q Consensus 134 ~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~ig~~l~~~l~~~--------------- 198 (454)
++..++++-++.|.|.+...+.++++++...++++..+.+++.+..+++|..+||++++.+..+
T Consensus 103 -~y~~FL~~lFila~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lils~~~~~~~~~~~~~~~ 181 (422)
T COG0738 103 -SYGFFLVALFILASGIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLILSGVALTMSAAQILAIK 181 (422)
T ss_pred -hHHHHHHHHHHHHhhhHHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhhccCHHHHHHHH
Confidence 8899999999999999999999999999999999999999999999999999999999988762
Q ss_pred ----cCcchhHHHHhHHHHHHHHHHHHhc-CCCCCCCCCCChhhhhhhhhccccCCCCCCcchhHhhcCcchHHHHHHHH
Q 012902 199 ----FGWPSVFYSFGSLGTVWFTVWLSKA-HSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHF 273 (454)
Q Consensus 199 ----~gwr~~f~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (454)
-.||++|...+...++..+...... |+.++.+++..+.+ .....+++|+|+++...+..+
T Consensus 182 ~~~~~~v~~pYl~~~~~lvll~v~~~~~k~p~~~~~~~~~~~~~---------------~~~~~~l~~~~~~~~gvl~~F 246 (422)
T COG0738 182 GADASSVQFPYLILAGLLVLLAVLILLSKLPDLQVAAPSLGASG---------------SAGLSSLFQNKHLRLGVLAIF 246 (422)
T ss_pred HHHHHhhhhHHHHHHHHHHHHHHHHHhccCCcCCcccccccccc---------------cchHHHHHhChHHHHHHHHHH
Confidence 2488888888777766655443322 22222111111000 114567899999999999999
Q ss_pred HHHHHHHHHHhhHHHHHHHHhCCcccchhhHhHHHHHHHHHHHHHHHHHhhhhhhcCccchhhHHHHHHHHHHHHHHHHH
Q 012902 274 CHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLT 353 (454)
Q Consensus 274 ~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (454)
++........+|++.|+.+..|.+..++....+.+..+.++|++++.++.+|+...|. +...+.....++.
T Consensus 247 lYVG~Eva~gsfl~~y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~~~~~k~--------Laf~a~~~ill~~- 317 (422)
T COG0738 247 LYVGAEVAIGSFLVSYLEELLGLNEQQAAYYLSFFWVGFMVGRFIGSALMSRIKPEKY--------LAFYALIAILLLL- 317 (422)
T ss_pred HHHhHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHH--------HHHHHHHHHHHHH-
Confidence 9999999999999999999889999999999999999999999999999999988742 2222222222222
Q ss_pred HhhccChhHHHHHHHHHHHhhhhhhcchhhhhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHH
Q 012902 354 QLSHVDSPAMAVLCMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSV 433 (454)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~ 433 (454)
.....+.........+++.+.. ...|.......+.-|++...+.++ -.+..+|+++-|++.|++.|..|....+....
T Consensus 318 ~~~l~~g~v~~~~l~~ig~F~s-imfPTIfslal~~l~~~ts~~s~~-l~maivGGAiiP~l~G~i~d~~g~~~~~~~~p 395 (422)
T COG0738 318 AVALIGGVVALYALFLIGLFNS-IMFPTIFSLALKNLGEHTSVGSGL-LVMAIVGGAIIPPLQGVIADMFGIQLTFLIVP 395 (422)
T ss_pred HHHHhcChHHHHHHHHHHHHhH-HHHHHHHHHHHhccCcccccccee-eeeheecchHHHHHHHHHHHhhhhHHHHHHHH
Confidence 2222333444444555555544 444555555544444544444443 56677899999999999999988887776444
Q ss_pred HHHHHHHHHH
Q 012902 434 GLYLVGTAVW 443 (454)
Q Consensus 434 ~~~~~~~~~~ 443 (454)
..+.+-.+.+
T Consensus 396 llc~lyV~~~ 405 (422)
T COG0738 396 LLCYLYVLFF 405 (422)
T ss_pred HHHHHHHHHH
Confidence 4444444333
No 84
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.97 E-value=1.6e-28 Score=237.60 Aligned_cols=388 Identities=14% Similarity=0.086 Sum_probs=259.7
Q ss_pred Hhhhchhhhhcchhh-hhh--cCCChhhHHHHHHHHHHHHHHhhhhhhhhhcc-ccchHHHHHHHHHHHHHHhhhhhccc
Q 012902 58 IVFGQVNMSIAILPM-SAE--FNWNPATVGLIQSSFFWGYLLTQIAGGIWADT-VGGKAVLGFGVVWWSIATALTPVAAK 133 (454)
Q Consensus 58 ~~~~~~~~~~~~~~i-~~~--~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr-~Grr~~~~~~~~~~~~~~~l~~~~~~ 133 (454)
+.+..+...+.+|.+ .++ +|.+..+.+++.+.+.++..++++++|+++|| +|||+++..+.++.+++.++.++++
T Consensus 22 ~~~~~~~~~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~~~~~~~g~~~~~~~~- 100 (475)
T TIGR00924 22 ERFSYYGMQGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLGGIVLMLGHFMLAMSI- 100 (475)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHHHHHHHHHHHHHHhcc-
Confidence 555555556666654 555 89999999999999999999999999999999 8999999999999999999999998
Q ss_pred ccHHHHHHHHHHHHhhcccchhhhhHHHhhhcCccc---hHHHHHHHHhhHHHHHHhHHhHHHHHhhccCcchhHHHHhH
Q 012902 134 LGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAE---RSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGS 210 (454)
Q Consensus 134 ~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~---rg~~~~~~~~~~~~g~~ig~~l~~~l~~~~gwr~~f~~~~~ 210 (454)
+++.++++|.+.|+|.|...+...++++|++|+++ |+++.++++.+.++|..+||.+++++.+++|||+.|++.++
T Consensus 101 -~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~l~~~~g~~~~f~~~~~ 179 (475)
T TIGR00924 101 -YPDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLAGVIAENYGYHVGFNLAAV 179 (475)
T ss_pred -cHhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHH
Confidence 88899999999999999999999999999998754 88899999999999999999999999999999999999876
Q ss_pred HHHHHHHHHHHhcC---CCCCCCCCCChhhhhhhh------------------h-c--------------------cccC
Q 012902 211 LGTVWFTVWLSKAH---SSPAEDPQLRPAEKKLIV------------------S-S--------------------CASK 248 (454)
Q Consensus 211 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~------------------~-~--------------------~~~~ 248 (454)
..++..+......+ +.++++++.++++++... . + +...
T Consensus 180 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (475)
T TIGR00924 180 GMVIGLLTFFAGRHMLRDIGSVPDPLSGQGKTYGKLLLALLAALALVFFCAWLMHHVVIANILLMTVTLAVIIFFFRLAF 259 (475)
T ss_pred HHHHHHHHHHHcccccccCCCCCCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55544333322221 111111111111100000 0 0 0000
Q ss_pred CCCCCcchhHhhcCcchHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCcccc----hhhHhHHHHHHHHHHHHHHHHHhh
Q 012902 249 EPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTE----SGLFCVLPWLTMAFSANLGGWIAD 324 (454)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~----~~~~~~~~~~~~~~~~~~~g~l~d 324 (454)
++ ..+..+..|...+..+.+...+.+..+....+.++.+.++..+.+... .+.+.+...+..++..++..++..
T Consensus 260 ~~--~~~~~~~~~~~~~l~l~~~~~~~~~~~~Q~~s~l~l~~~~~~~~~~~~~~ip~~~~~~~n~~~iil~~p~~~~~~~ 337 (475)
T TIGR00924 260 KP--RLDAVARNKMYAYIVLFLEAVVFWVLYAQMPTSLNFFADNNMHHEMLGMSVPVIWFQSLNPFWVVVGSPVLAMIWT 337 (475)
T ss_pred hc--cCCHHHHhHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhccccccceEECHHHHHhhhHHHHHHHHHHHHHHHH
Confidence 00 011111112223444555556666677777777888887754444222 667888888888888777666666
Q ss_pred hhhhcCccchhhHHHHHHHHHHHHHHHHHHh----h---ccChhHHHHHHHHHHHhhhhhhcchhhhhh-cccccccchh
Q 012902 325 TLVSKGLSVTTVRKIMQSIGFLGPAFFLTQL----S---HVDSPAMAVLCMACSQGTDAFSQSGLYSNH-QDIAPRYSGV 396 (454)
Q Consensus 325 r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 396 (454)
|..||+.......+......+...+...... . ...+.++.+....+...+.....+...... +..|++.||+
T Consensus 338 ~l~~~~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~~~~~ge~~~~p~~~~~~~~~aP~~~~g~ 417 (475)
T TIGR00924 338 RLGRKGKDPTTPLKFTLGMLFCGASFLTFAASIWFADAGGLTSPWFMVLIYLFQTLGELMISPLGLSWWTKIAPQRLMGQ 417 (475)
T ss_pred HHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCHHHHHH
Confidence 6665421111111112122111111111111 0 122344444444444444444445555544 5556678999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHHHHhccC
Q 012902 397 LLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWNLFSTG 449 (454)
Q Consensus 397 ~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 449 (454)
++|+......+|..+++.+.+...+..++...|...++..++..++.++..+.
T Consensus 418 ~~g~~~l~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 470 (475)
T TIGR00924 418 MLGMWFLAQAMGSLLGGYLATFGAVPQGVTGVFGKIGLVTLLVGVVMALMVPW 470 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999988887888888888887777776666655543
No 85
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.97 E-value=5.8e-29 Score=268.19 Aligned_cols=360 Identities=16% Similarity=0.118 Sum_probs=251.0
Q ss_pred hchhhhhcchhhhhhcCCCh--hhHHHHHHHHHHHHHHhhhhhhhhhccccchHHHHHHHHHHHHHHhhh---hhccccc
Q 012902 61 GQVNMSIAILPMSAEFNWNP--ATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALT---PVAAKLG 135 (454)
Q Consensus 61 ~~~~~~~~~~~i~~~~~~s~--~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~l~---~~~~~~~ 135 (454)
+......+.+.+..+++.+. ...+++.+++.+++.++++++|+++||+|||++++++.++..+..++. ..++ +
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~grk~~l~~~~~~~~~~~~~~~~~~~~~--~ 102 (1146)
T PRK08633 25 DLGHKILIQNTLIKAYDGSEQVILTAIVNALFLLPFLLLSSPAGFLADKFSKNRVIRIVKLFEVGLTLLIVLAYYLG--W 102 (1146)
T ss_pred HHHHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHhhhHhhhcccccHHHHHHHHHHHHHHHHHHHHHHHHHc--c
Confidence 33444445556666666554 447999999999999999999999999999999999887666555544 3456 7
Q ss_pred HHHHHHHHHHHHhhcccchhhhhHHHhhhcCccchHHHHHHHHhhHHHHHHhHHhHHHHHhhc--------c-CcchhHH
Q 012902 136 LPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHR--------F-GWPSVFY 206 (454)
Q Consensus 136 ~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~ig~~l~~~l~~~--------~-gwr~~f~ 206 (454)
++.++++|+++|++.+...+...+++.|++|+++|++++|+.+.+.++|.++|+.+++++.+. + +|++.+.
T Consensus 103 ~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ig~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~ 182 (1146)
T PRK08633 103 FWLAFAVTFLLGAQSAIYSPAKYGIIPELVGKENLSRANGLLEAFTIVAILAGTALFSFLFESVNGNTPSEILGRIAPAG 182 (1146)
T ss_pred HHHHHHHHHHHHHHHHhhchHHHhhhHHhcCcccchhhhhHHHHHHHHHHHHHHHHHHHHHHhhccccccccccchHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999875 2 3445444
Q ss_pred HHhHHHHHHHHHHHHhcCCCCCCCCCCChhhhhhhhhccccCCCCCCcchhHhhcCcchHHHHHHHHHHHHHHHHHHhhH
Q 012902 207 SFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWM 286 (454)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (454)
+..+...+..++..+..|+.++......+.+.. .........++.++++|.++...+..++..........++
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (1146)
T PRK08633 183 LVLLAVAVLGLIFAYRLPKVPAAAPEVFDKKKY-------LFPKLLWRNLKLLRSDRVLWLAIIGLSYFWFISQLAQANF 255 (1146)
T ss_pred HHHHHHHHHHHHHHhcCcCCCCCCccccccccc-------ccHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHhh
Confidence 444443333344444456655432221100000 0000012345667888988888777777777777888899
Q ss_pred HHHHHHHhCCccc-chhhHhHHHHHHHHHHHHHHHHHhhhhhhcCccchhhHHHHHHHHHHHHHHHHHHhhccChh-HHH
Q 012902 287 PTYYNQVLHFNLT-ESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSP-AMA 364 (454)
Q Consensus 287 ~~~l~~~~g~s~~-~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 364 (454)
|.|+++.+|.+.. +.+++.....++.+++.++.+++.||+++++....+ .++.++.........+. ...
T Consensus 256 ~~~~~~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~ 326 (1146)
T PRK08633 256 PAYAKEVLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRHIELGLVPLG---------ALGLALSLFLLPTAPSLASVL 326 (1146)
T ss_pred HHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEccchhHH---------HHHHHHHHHHHHHhhhHHHHH
Confidence 9999998999998 999999999999999999999999999987543221 11111111111111222 333
Q ss_pred HHHHHHHHhhhhhhcchhhhhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHhcc-CCchhHHHHHHHHHHH
Q 012902 365 VLCMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQH-GSWDDVFKVSVGLYLV 438 (454)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~-~g~~~~~~~~~~~~~~ 438 (454)
+..++.+.+.+....+......+..+++.||+++|+.+.+.++|..+++.+.+.+... .++...+++.+.+.++
T Consensus 327 ~~~~~~g~~~~~~~~~~~~~~~~~~p~~~rg~~~~~~~~~~~lg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 401 (1146)
T PRK08633 327 VLFFLFGFSAGLFIVPLNALIQFRAPEKELGKVLAANNFLQNVGMLLFLALTTLFSGLGLSPAGLFYLIALVTLI 401 (1146)
T ss_pred HHHHHHHHHHHHhhHHHHHHHhhcCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHH
Confidence 3344444444444444444444556778999999999999999998888877766542 3444455555444433
No 86
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.97 E-value=5.6e-28 Score=229.77 Aligned_cols=361 Identities=11% Similarity=0.063 Sum_probs=255.7
Q ss_pred HHhhhchhhhhcchhhhhhcCCChhhHHHH--HHHHHHHHHHhhhhhhh-hhccccchHHHHHHHHHH-HHHHhhhh---
Q 012902 57 FIVFGQVNMSIAILPMSAEFNWNPATVGLI--QSSFFWGYLLTQIAGGI-WADTVGGKAVLGFGVVWW-SIATALTP--- 129 (454)
Q Consensus 57 ~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~--~s~~~~~~~~~~~~~g~-l~dr~Grr~~~~~~~~~~-~~~~~l~~--- 129 (454)
..+.......+.+|.+.+|.|.|.+++|.+ .+...+...+.+|++++ ..||+||||.+++...+. ++.....+
T Consensus 12 ~~g~~~~~~~p~lp~~l~~~g~~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~~g~r~~~i~~~~~~~~~~~~~~~~~~ 91 (390)
T TIGR02718 12 SQGIPIGLAMDALPTLLREDGAPLTALAFLPLVGLPWVVKFLWAPLVDNWWSWRLGRRRSWVLPMQCLVSACLASLALVG 91 (390)
T ss_pred HHHhHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCcchhHHHHHHHHHHHHHHHHHcCC
Confidence 578888888899999999999999999997 46778888889999955 799999999975555332 21222222
Q ss_pred hcccccHHHHHHHHHHHHhhcccchhhhhHHHhhhcCccchHHHHHHHHhhHHHHHHhHHhHHHHHhhccCcchhHHHHh
Q 012902 130 VAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFG 209 (454)
Q Consensus 130 ~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~ig~~l~~~l~~~~gwr~~f~~~~ 209 (454)
.... ....++..-.+.++..+...+...++..|..++++++...+....+..+|..+|+.+.+++.+++|||..|++.+
T Consensus 92 ~~~~-~~~~~~~~~~~~~~~~a~~d~~~d~~~~~~~~~~~~~~~~~~~~~g~~lG~~~g~~~~~~l~~~~gw~~~f~~~a 170 (390)
T TIGR02718 92 PDVA-GAGWAVGLLACASLASATQDIATDGMAAEHFNGRTLAKGNAVQIAGVMIGFFGGGAGTLVLFGKFGQRPAFLLVA 170 (390)
T ss_pred cchh-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHH
Confidence 2221 233445555666677777888888888999988888999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCCCCCCCCCChhhhhhhhhccccCCCCCCcchhHhhcCcchHHHHHHHHHHHHHHHHHHhhHHHH
Q 012902 210 SLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTY 289 (454)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (454)
.+.++..+..++..|++++++++ + ++ +..++++.+|+|.++......++..........+.+.|
T Consensus 171 ~l~~~~~~~~~~~~~~~~~~~~~-~--~~-------------~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 234 (390)
T TIGR02718 171 CVPLASLVCVLWLKDRAVASPEA-P--LA-------------RRASLFRFFRRPLAWSLLALALLSAMTAVSGFGLSKLY 234 (390)
T ss_pred HHHHHHHHHHHHcCCCCcCcccc-c--hh-------------hHHHHHHHHcCcCHHHHHHHHHHHHHHHHHHHHHhhHH
Confidence 88877666655544443221110 0 00 02346678999999888888888888888888899999
Q ss_pred HHHHhCCcccchhhHhHHHHH-HHHHHHHHHHHHhhhhhhcCccchhhHHHHHHHHHH-HHHHHHHH-hh--ccChhHHH
Q 012902 290 YNQVLHFNLTESGLFCVLPWL-TMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFL-GPAFFLTQ-LS--HVDSPAMA 364 (454)
Q Consensus 290 l~~~~g~s~~~~~~~~~~~~~-~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~--~~~~~~~~ 364 (454)
++| .|+++++++........ ..+++.+..|++.||+++|+... ...... ........ .. ........
T Consensus 235 l~~-~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (390)
T TIGR02718 235 LVD-AGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLWRTFI-------LGVGLAGSLALLWFAQAAFWLAPGIAVA 306 (390)
T ss_pred HHh-cCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHH-------HHHHHHHHHHHHHHHHHHcccCCcHHHH
Confidence 998 69999999998887764 66677899999999999885322 111111 11111111 11 11122222
Q ss_pred HHHHHHHHhhhhhh-cchhhhhhccccc-ccchhHHHHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHH
Q 012902 365 VLCMACSQGTDAFS-QSGLYSNHQDIAP-RYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAV 442 (454)
Q Consensus 365 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~ 442 (454)
.....+.....+.. ........+..++ +++++.+++.+...++|..++|.+.|.+.|..|++..|...+++.+++...
T Consensus 307 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g~~~~G~l~~~~G~~~~f~~~~~~~l~a~~~ 386 (390)
T TIGR02718 307 WSCSAFGSLITGITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELIASSIAGYLTDRFGYAGGFLSGTVLAVLAILL 386 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHH
Confidence 22222222222222 2233333455565 789999999999999999999999999999999999998888777666543
No 87
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.97 E-value=7.4e-28 Score=232.85 Aligned_cols=397 Identities=15% Similarity=0.151 Sum_probs=253.1
Q ss_pred HHHHHHHHHHHHHHHHhhhchhhhh-cchhhhhhcCCChhhHHHHHHHHHHHHHHhhhhhhhhhcc-ccchHHHHHHHHH
Q 012902 43 KQIISLCVGNFEQIFIVFGQVNMSI-AILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADT-VGGKAVLGFGVVW 120 (454)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr-~Grr~~~~~~~~~ 120 (454)
+..+.++...+. ..+..+.... ...++.+++|.+.++.+++.+.+.....+..+++|+++|| +||||++..+.++
T Consensus 14 ~~~~~~~~~~~~---er~~~y~~~~~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g~~~ 90 (489)
T PRK10207 14 RPFFMIFFVELW---ERFGYYGVQGILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGAIV 90 (489)
T ss_pred hhHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHHHHH
Confidence 334444444433 4444444443 4455788999999999999999999999999999999999 9999999999999
Q ss_pred HHHHHhhhhhcccccHHH-HHHHHHHHHhhcccchhhhhHHHhhhcCcc--chHHHHHHHHhhHHHHHHhHHhHHHHHhh
Q 012902 121 WSIATALTPVAAKLGLPF-LLVVRVFMGIGEGVAMPAMNNILSKWVPVA--ERSRSLALVYSGMYLGSVTGLAFSPFLIH 197 (454)
Q Consensus 121 ~~~~~~l~~~~~~~~~~~-l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~--~rg~~~~~~~~~~~~g~~ig~~l~~~l~~ 197 (454)
++++.+++++++ +... ++++|+++|+|.|...|...++++|.+|++ +|++++++++.+.++|..+||.+++++.+
T Consensus 91 ~~~g~~~~~~~~--~~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g~l~~ 168 (489)
T PRK10207 91 LAIGYFMTGMSL--LKPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAPVIAD 168 (489)
T ss_pred HHHHHHHHHHhc--cchhHHHHHHHHHHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999987 5444 558999999999999999999999999877 45789999999999999999999999999
Q ss_pred ccCcchhHHHHhHHHHHHHHHHHHhcCCCCCCC---CCCChhhh-hhh------------hh-ccccCCCC---------
Q 012902 198 RFGWPSVFYSFGSLGTVWFTVWLSKAHSSPAED---PQLRPAEK-KLI------------VS-SCASKEPV--------- 251 (454)
Q Consensus 198 ~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~-~~~------------~~-~~~~~~~~--------- 251 (454)
++|||+.|++.++ +++..++.+...++..++. ++.++.+. ... .. ..+..+..
T Consensus 169 ~~gw~~~F~i~~i-~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (489)
T PRK10207 169 KFGYSVTYNLCGA-GLIIALLVYFACRGMVKDIGSEPDHKPMSFSKLLLVLLGSVVMIFVCAWLMHNVEVANLVLIVLSI 247 (489)
T ss_pred hhChHHHHHHHHH-HHHHHHHHHHHcchhhcccCCCCCccchhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHH
Confidence 9999999998654 3333333333333221111 10000110 000 00 00000000
Q ss_pred --------CCcchhHhhcCcchHHHHHH--HHHHHHHHHHHHhhHHHHHHHHhCCcc----cchhhHhHHHHHHHHHHHH
Q 012902 252 --------KTIPWGLILSKPPVWALIVS--HFCHNWGTFILLTWMPTYYNQVLHFNL----TESGLFCVLPWLTMAFSAN 317 (454)
Q Consensus 252 --------~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~~g~s~----~~~~~~~~~~~~~~~~~~~ 317 (454)
.....++.+|+|.+....+. ..+.+..+....+.++.+.++..+.+. .....+.....+..++..+
T Consensus 248 i~~~~f~~~~~~~~~~~r~r~~~~~~l~~~~~~f~~~~~q~~~~l~l~~~~~~~~~~~G~~i~~~~~~~~n~~~iii~~p 327 (489)
T PRK10207 248 VVTIIFFREAFKLDKTGRNKMFVAFVLMLEAVVFYILYAQMPTSLNFFAINNVHHEILGFSINPVSFQALNPFWVVVASP 327 (489)
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHhccccccceEECHHHHHhHhHHHHHHHHH
Confidence 00000135566655543322 444455555666778888875333221 1123344445566667788
Q ss_pred HHHHHhhhhhhcCccchhhHHHHHHHHHHHHHHHH-----HHhh-c---cChhHHHHHHHHHHHhhhhhhcchhhhhhcc
Q 012902 318 LGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFL-----TQLS-H---VDSPAMAVLCMACSQGTDAFSQSGLYSNHQD 388 (454)
Q Consensus 318 ~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (454)
+.+++.||+++|+.......+......+...+... .... . .+.++......+.+.+.....++......+.
T Consensus 328 l~~~l~~rl~~r~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~l~g~Ge~~~~~~g~~~~~~~ 407 (489)
T PRK10207 328 ILAGIYTHLGSKGKDLSMPMKFTLGMFLCSLGFLTAAAAGMWFADAQGLTSPWFIVLVYLFQSLGELFISALGLAMIAAL 407 (489)
T ss_pred HHHHHHHHHhhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHh
Confidence 88999999998864221111222222221111111 1111 1 1223334444555655556666666667778
Q ss_pred cccccchhHHHHHHHHHHHHHHHHHHHHHHHhc----------cCCchhHHHHHHHHHHHHHHHHHH
Q 012902 389 IAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQ----------HGSWDDVFKVSVGLYLVGTAVWNL 445 (454)
Q Consensus 389 ~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~----------~~g~~~~~~~~~~~~~~~~~~~~~ 445 (454)
.|++.+|.++|+.+...++|+.++..+.+.... ...+...|...++..+++.++.+.
T Consensus 408 aP~~~~g~~~g~~~l~~~ig~~lg~~l~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~v~~~~ 474 (489)
T PRK10207 408 VPQHLMGFILGMWFLTQAAAFLLGGYVATFTAVPDNITDPLETLPVYTNVFGKIGLVTLGVAVVMAL 474 (489)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 888999999999999999999999988875531 113566777666666655555444
No 88
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.97 E-value=3.3e-28 Score=233.25 Aligned_cols=352 Identities=14% Similarity=0.134 Sum_probs=253.0
Q ss_pred HhhhchhhhhcchhhhhhcCCChhhHHHHHHHHHHHHHHhhhhhhhhhccccchHHHHHHHHHHHHHHhhhhhcccccHH
Q 012902 58 IVFGQVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLP 137 (454)
Q Consensus 58 ~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~l~~~~~~~~~~ 137 (454)
..+.....+..++.+.+|+| +.....|+.+.+.++.++..++.|+++|.+|||++++.+.++..+|.++++.++ |..
T Consensus 56 ~~~~~~~~a~~l~~I~~diG-~~~~~~w~~~~~~l~~av~~~~~G~LSDlfGRr~~~i~g~~l~vvG~Iv~atA~--~~~ 132 (599)
T PF06609_consen 56 AYFVLVLPASILPYINADIG-GSDNWSWFSTAWTLASAVSFPFVGRLSDLFGRRYFFIIGSLLGVVGSIVCATAQ--NMN 132 (599)
T ss_pred HHHHHhccHHHHHHHHHhcC-CCccchHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHhHHHHhhcCC--cHH
Confidence 33444455667888999999 567889999999999999999999999999999999999999999999999999 999
Q ss_pred HHHHHHHHHHhhcccchhhhhHHHhhhcCccchHHHHHHHHhhHHHHHHhHHhHHHHHhhccCcchhHHHHhHHHHHHHH
Q 012902 138 FLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFT 217 (454)
Q Consensus 138 ~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~ig~~l~~~l~~~~gwr~~f~~~~~~~~~~~~ 217 (454)
.++++..+.|+|.|... .....++|..|.|+|+...++.....-....+++.++..+..+.+|||.|++.++...+.++
T Consensus 133 ~~iag~~l~GvgaG~~~-~~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia~~~~~~~~WRw~~~~~~i~~~i~~v 211 (599)
T PF06609_consen 133 TFIAGMVLYGVGAGVQE-LAALAISELVPNKWRGLGLAIASIPFIITTWISPLIAQLFAAHSGWRWIFYIFIIWSGIALV 211 (599)
T ss_pred HHHHHHHHHHHhhHHHH-HHHHHHHHhcccchhhhHhHHHHHHHHhhhcccHHHHHHhccCCCcchHHHHHHHHHHHHHH
Confidence 99999999999977655 45666999999999998888887776666677888888777778999999999888777665
Q ss_pred HHHHhcCCCCCCC--CCC-Chhhh--hhh------------------------------------------------hhc
Q 012902 218 VWLSKAHSSPAED--PQL-RPAEK--KLI------------------------------------------------VSS 244 (454)
Q Consensus 218 ~~~~~~~~~~~~~--~~~-~~~~~--~~~------------------------------------------------~~~ 244 (454)
+.+++...+++++ .+. .+.+. +.+ ..|
T Consensus 212 l~~~fY~PP~~~~~~~~~~s~~~~l~~lD~IG~~L~~~Gl~LfLlgl~wgG~~~~~W~Sa~VIa~lviG~~~Lv~F~~wE 291 (599)
T PF06609_consen 212 LIFFFYFPPPRAQLHGRKLSKREQLKELDWIGIFLFIAGLALFLLGLSWGGYPYYPWKSAHVIAPLVIGFVLLVAFVVWE 291 (599)
T ss_pred HHHHHhCCCchhhhccccCcHHHHHHHhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCCccchhhHHHHHHHHHHHHHhh
Confidence 5444433222211 111 11111 110 001
Q ss_pred cccCCCCCCcchhHhhcC-cchHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCccc---chhhHhHHHHHHHHHHHHHHH
Q 012902 245 CASKEPVKTIPWGLILSK-PPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLT---ESGLFCVLPWLTMAFSANLGG 320 (454)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~---~~~~~~~~~~~~~~~~~~~~g 320 (454)
...+.+.+..|. +++|+ |.+...++..++....++....+.|......++-++. ..++.....+++..++..+.|
T Consensus 292 ~~~~~~~Pl~P~-~Lf~~~r~~~~~lvi~fi~G~~~~s~~~l~p~~~~~vf~~d~~~~~~~~~~s~~~~fg~~~g~~i~g 370 (599)
T PF06609_consen 292 WFGAPKDPLFPH-RLFKDRRGFAALLVISFISGMNFFSVNILWPQQVVNVFGSDPISITEIGWISSPVGFGSCAGAVILG 370 (599)
T ss_pred hhccCCCCcCCH-HHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCcccceeehhhhhHHHHHHHHHHHHH
Confidence 111111123333 47777 5566666777788878888888999988887777664 567888888899999999999
Q ss_pred HHhhhhhhcCccchhhHHHHHHHHHHHHH---HHHHHhhccChhHHHHHHHHHHHhhhhhhcchhhhhhcccccccchhH
Q 012902 321 WIADTLVSKGLSVTTVRKIMQSIGFLGPA---FFLTQLSHVDSPAMAVLCMACSQGTDAFSQSGLYSNHQDIAPRYSGVL 397 (454)
Q Consensus 321 ~l~dr~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (454)
.+..|.+|-|.. +.++.+... ..+......+.........+.+.+.+....+........+|+++.|++
T Consensus 371 ~l~~~ir~~Kw~--------li~~~~~~ta~~Gama~~~~~n~~~~i~~~~l~g~giG~~~~~~~~~~ql~~p~~~ig~a 442 (599)
T PF06609_consen 371 LLFSKIRHIKWQ--------LIFGSVLMTAFCGAMAAVRPDNKNAAIAFLVLAGFGIGGILVPAIVIAQLIVPDEDIGTA 442 (599)
T ss_pred HHHHHccchhHH--------HHHHHHHHHHHHHHHHHccCCCcchHHHHHHHHHHhHHHHHHHHHHeeEeeeCchHHHHH
Confidence 999888766422 212221111 112222233333344445555555555555555555566778899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcc
Q 012902 398 LGLSNTAGVLAGVFGTAATGYILQH 422 (454)
Q Consensus 398 ~g~~~~~~~~g~~~~~~~~g~l~~~ 422 (454)
.|+..+++.+|+.+|..+...++.+
T Consensus 443 ~gL~~s~R~~GGsIg~aIy~~I~~n 467 (599)
T PF06609_consen 443 TGLTGSIRSIGGSIGYAIYNAIFTN 467 (599)
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHh
Confidence 9999999999999999999887754
No 89
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.97 E-value=1.5e-28 Score=237.73 Aligned_cols=339 Identities=14% Similarity=0.113 Sum_probs=239.2
Q ss_pred hcchhhhhhcCCChhhHHHHHHHHHHHHHHhhhhhhhhhcc----ccchH-HHHHHHHHHHHHHhhhhhcccc----cHH
Q 012902 67 IAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADT----VGGKA-VLGFGVVWWSIATALTPVAAKL----GLP 137 (454)
Q Consensus 67 ~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr----~Grr~-~~~~~~~~~~~~~~l~~~~~~~----~~~ 137 (454)
...+.+.+++|+++.++|++.++..+..++..|+.|+++|| +|||| .++.+....+++.+++.+.+.. ...
T Consensus 21 ~l~~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~~~~~~~~~~~~~~ 100 (437)
T TIGR00792 21 YLLFFYTDVLGLSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLLFTTPDFSATGKLV 100 (437)
T ss_pred HHHHHHHHccCCCHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHHHhCCCCCcchHHH
Confidence 34566788999999999999999999999999999999998 67755 5777888888888888776621 145
Q ss_pred HHHHHHHHHHhhcccchhhhhHHHhhhc-CccchHHHHHHHHhhHHHHHHhHHhHHHHHhh-------ccCcchhHHHHh
Q 012902 138 FLLVVRVFMGIGEGVAMPAMNNILSKWV-PVAERSRSLALVYSGMYLGSVTGLAFSPFLIH-------RFGWPSVFYSFG 209 (454)
Q Consensus 138 ~l~~~r~l~G~~~g~~~~~~~~~i~~~~-~~~~rg~~~~~~~~~~~~g~~ig~~l~~~l~~-------~~gwr~~f~~~~ 209 (454)
.+++.+++.+++.+...++..++..|.. ++++|++..++.+.+..+|..+++.+.+.+.. ..+||+.+.+.+
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~~~~~~~g~~~~~~i~~ 180 (437)
T TIGR00792 101 YAYITYILLGLFYSFVNIPYWSLVPAITLDPRERESLSTFRRFGATLGGLLVAVIVLPLVSYFGGGDDKFGWFMFALVLA 180 (437)
T ss_pred HHHHHHHHHHHHHHhhcccHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccccHHHHHHHHH
Confidence 6677889999998888888888899987 46889999999999999988887776665542 468999999999
Q ss_pred HHHHHHHHHHHHhcCCCCCCCCCCChhhhhhhhhccccCCCCCCcchhHhhcCcchHHHHHHHHHHHHHHHHHHhhHHHH
Q 012902 210 SLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTY 289 (454)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (454)
+++++..++..+..||++++.++.++ ++......++.+++||.++...+..++..........+.+.|
T Consensus 181 ~l~~~~~~~~~~~~~e~~~~~~~~~~------------~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (437)
T TIGR00792 181 LIGVVSLIICFFGTKERYSEIPKNIE------------KKLSLKQIFKALFKNDQLLILCLAYLFYNLAFNIKNGVQVYY 248 (437)
T ss_pred HHHHHHHHHHHcCCEecCCCCCcccc------------cCCCHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcchhhee
Confidence 98888877766667765422111000 001112346678899999988888888877777776666777
Q ss_pred HHHHhCCcccchhhHhHHHHHHHHHHHHHHHHHhhhhhhcCccchhhHHHHHHHHHHHHHHHHHHhhccChhHHHHHHHH
Q 012902 290 YNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLCMA 369 (454)
Q Consensus 290 l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 369 (454)
.++..+ ++.+.+.+.....++.+++.++.+++.||+|+|+... ..................+.........+
T Consensus 249 ~~~~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (437)
T TIGR00792 249 FTYVLG-DPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRKILFA-------GGILLMVLGYLIFFFAGSNLPLILVLIIL 320 (437)
T ss_pred EeeecC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHH-------HHHHHHHHHHHHHHHcchhHHHHHHHHHH
Confidence 766555 4556677777788999999999999999999885322 22111111111111111122222222233
Q ss_pred HHHhhhhhhcchhhhhh-ccc-------ccccchhHHHHHHHHHHHHHHHHHHHHHHHhccCCch
Q 012902 370 CSQGTDAFSQSGLYSNH-QDI-------APRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWD 426 (454)
Q Consensus 370 ~~~~~~~~~~~~~~~~~-~~~-------~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~ 426 (454)
.+.+.+... +...... +.. +++.+|.+.|+.+....+|..+++.+.|.+.|..||.
T Consensus 321 ~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g~ll~~~G~~ 384 (437)
T TIGR00792 321 AGFGQNFVT-GLVWALVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLVGLILGIIGYV 384 (437)
T ss_pred HHHHHHHHH-HHHHHHHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 333333332 3333332 222 2456899999999999999999999999999887764
No 90
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=99.97 E-value=6.7e-28 Score=236.26 Aligned_cols=384 Identities=16% Similarity=0.082 Sum_probs=258.2
Q ss_pred chhhhhcchhhhhhc-----CCCh--hhHHHHHHHHHHHHHHhhhhhhhhhccccchHHHHHHHHHHHHHHhhhhhcccc
Q 012902 62 QVNMSIAILPMSAEF-----NWNP--ATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKL 134 (454)
Q Consensus 62 ~~~~~~~~~~i~~~~-----~~s~--~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~l~~~~~~~ 134 (454)
....++..+.++++. ..+. .+.+|+.+.+.++..+++++.|+++|++|||+.+.++.+++.++.+++++++
T Consensus 63 ~g~~s~~~~~~~~~~~~~~~~~~~~~~~~s~~~s~~~lga~~g~l~~g~l~d~~GRk~~l~~~~~~~~iG~ii~~~a~-- 140 (513)
T KOG0254|consen 63 IGGISGALDFLQRFASLYDLSTGEYSVRQGLLTSILNLGALVGSLLAGRLGDRIGRKKTLLLAVVLFLIGAIIIALAP-- 140 (513)
T ss_pred cccchhhHHHHHhcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhh--
Confidence 445555666665532 2222 3559999999999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHHHHHhhcccchhhhhHHHhhhcCccchHHHHHHHHhhHHHHHHhHHhHHHHHhhc-cCcchhHHHHhHHHH
Q 012902 135 GLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHR-FGWPSVFYSFGSLGT 213 (454)
Q Consensus 135 ~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~ig~~l~~~l~~~-~gwr~~f~~~~~~~~ 213 (454)
|+++++++|+++|+|.|......+.+++|..|++.||...+..+....+|..++..++....+. ++||..+.+..+.++
T Consensus 141 ~~~~l~~GR~l~G~g~G~~~~~~piy~sEiap~~~RG~l~~~~~l~~~~Gi~~~~~~~~~~~~~~~~Wr~~~~~~~i~~~ 220 (513)
T KOG0254|consen 141 SWYQLIVGRILTGLGVGGASVLAPVYISEIAPAHIRGTLVSLYQLFITIGILLGYCINYGTSKVYAGWRIPLGLALIPAV 220 (513)
T ss_pred hHHHHHHHHHHhccchhhhhhcchhhHhhcCChhhhHHHHHHHHHHHHHHHHHHHHHhhhhccCCccHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999995555544432 489999999888888
Q ss_pred HHHHHHHHhcCCCCCCCCCCChh-hhhhh-------------------hhcc--ccCCCCCCcchhHhhc----CcchHH
Q 012902 214 VWFTVWLSKAHSSPAEDPQLRPA-EKKLI-------------------VSSC--ASKEPVKTIPWGLILS----KPPVWA 267 (454)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-------------------~~~~--~~~~~~~~~~~~~~~~----~~~~~~ 267 (454)
+..+. .++.||+|++.-+..+. +.+.. ..+. +.........++++++ ++.+..
T Consensus 221 ~~~~~-~~~~pesp~~L~~~g~~~~a~~~l~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~ 299 (513)
T KOG0254|consen 221 ILALG-MLFLPESPRWLIEKGRLEEAKRSLKRLRGLSPEDVEVELELLKIKLLVEAEVAEGKASWGELFSPKVRKRLIIG 299 (513)
T ss_pred HHHHH-HHhCCCChHHHHHcCChHHHHHHHHHHhCCCCcchHHHHHHHHHHHHHhhhcccccccHHHhcCcchHHHHHHH
Confidence 88777 78889998753221111 11000 0000 0000011112333333 223334
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHhCCcccchhhHhHHHHHHHHHHHHHHHHHhhhhhhcCccchhhHHHHHHHHHHH
Q 012902 268 LIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLG 347 (454)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~ 347 (454)
..+..+.+..+.+....|.+.+++.. |.+... .......++...++..++..+.||+|||+.+..+. ..+.++.+.
T Consensus 300 ~~l~~fqq~tG~~~~~~Y~~~if~~~-g~~~~~-~~~~~~~~~v~~~~t~~~~~lvd~~gRr~lll~s~--~~m~~~~~~ 375 (513)
T KOG0254|consen 300 LLLQLFQQLTGINYVFYYSTTIFKSA-GLKSDT-FLASIILGVVNFLGTLVATYLVDRFGRRKLLLFGA--AGMSICLVI 375 (513)
T ss_pred HHHHHHHHHhCCceEEeehHHHHHhc-CCCCch-HHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHhH--HHHHHHHHH
Confidence 55555555556677778888888874 666443 55556667788888888899999999997666554 222223322
Q ss_pred HHHHHHHhhcc-----C-hhHHHHHHHHHHHhhhhhhcchhhhhhccccc-ccchhHHHHHHHHHHHHHHHHHHHHHHHh
Q 012902 348 PAFFLTQLSHV-----D-SPAMAVLCMACSQGTDAFSQSGLYSNHQDIAP-RYSGVLLGLSNTAGVLAGVFGTAATGYIL 420 (454)
Q Consensus 348 ~~~~~~~~~~~-----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~~~~~~g~l~ 420 (454)
.+......... . ....+....+....+.....+....+..|..| +.|+++.++........+.+-......+.
T Consensus 376 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~f~~g~g~v~w~~~sEifp~~~r~~~~s~~~~~n~~~~~~v~~~~~~~~ 455 (513)
T KOG0254|consen 376 LAVVGVFALYYPNSSKGAGWLAIVFLCLFIFSFAIGWGPVPWVIVSEIFPLRLRSKGASLAVAVNWLWNFLISFFFPFIT 455 (513)
T ss_pred HHHHHHHhccCCCcccchhHHHHHHHHHHHHHHhcccccchhhhhhccCcHhHHhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22222221111 1 12222333333333344444555555556655 78999999999999988877777777776
Q ss_pred ccCCchhHHHHHHHHHHHHHH-HHHHhccCCcc
Q 012902 421 QHGSWDDVFKVSVGLYLVGTA-VWNLFSTGEKV 452 (454)
Q Consensus 421 ~~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 452 (454)
+..+....|...+..+.+... ...++.+|.|.
T Consensus 456 ~~~~~~~~f~~f~~~~~~~~~~fv~~~~pETkg 488 (513)
T KOG0254|consen 456 EALGIGGTFGYFGGICLLSLIIFVFFFVPETKG 488 (513)
T ss_pred HhccccchHHHHHHHHHHHHHHHheEEcccCCC
Confidence 665534555555555555544 44445555443
No 91
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.96 E-value=4.1e-28 Score=212.72 Aligned_cols=351 Identities=17% Similarity=0.079 Sum_probs=232.0
Q ss_pred CChhhHHHHHHHHHHHHHHhhhhhhhhhccccchHHHHHHHHHHHHHHhhhhhcccccHHHHHHHHHHHHhhcccchhhh
Q 012902 78 WNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAM 157 (454)
Q Consensus 78 ~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~ 157 (454)
.+..-.|.+.+.+.+...+.++.+|.++||+|||+++..+....++..++.+.+. |+..++++|++.|+.-| .....
T Consensus 65 ~~~~yaGflGSsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~~~S~--~F~afv~aR~l~Gi~kg-nl~v~ 141 (451)
T KOG2615|consen 65 ASVFYAGFLGSSFSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLWALSR--NFAAFVLARFLGGIFKG-NLSVI 141 (451)
T ss_pred ccchhhhhHhhHHHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHhhhhccC-chHHH
Confidence 3445679999999999999999999999999999999999999999999999999 99777777999999977 66788
Q ss_pred hHHHhhhcCccchHHHHHHHHhhHHHHHHhHHhHHHHHhh---ccCcchhHHH----HhHHHHHHHHHHHHhcCCCCCCC
Q 012902 158 NNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIH---RFGWPSVFYS----FGSLGTVWFTVWLSKAHSSPAED 230 (454)
Q Consensus 158 ~~~i~~~~~~~~rg~~~~~~~~~~~~g~~ig~~l~~~l~~---~~gwr~~f~~----~~~~~~~~~~~~~~~~~~~~~~~ 230 (454)
.++++|.+++|+|+++++.++..+++|.++||.+|+++.+ ..| +.+|.. ..++.........++.||+-+.+
T Consensus 142 rAiisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~f~~~~g-~~p~alP~~~v~i~a~~~v~~~~~~lpETL~~r 220 (451)
T KOG2615|consen 142 RAIISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQFSSISG-SYPFALPCLLVFILAAGDVTFFPWFLPETLPLR 220 (451)
T ss_pred HHHHHhhcChhhccceeeeeehhhhcchhhcchhhhHHHhhHhhhc-cCchHHHHHHHHHHHHHHHHHHHHhCCccccch
Confidence 9999999999999999999999999999999999999987 223 222222 12222222234445677764433
Q ss_pred CCCChhh-hhhhhhccccCCCCCCcchhHhhcCcchH-------HHHHHHHHHHHHHHHHHhhHHHHHHHHhCCcccchh
Q 012902 231 PQLRPAE-KKLIVSSCASKEPVKTIPWGLILSKPPVW-------ALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESG 302 (454)
Q Consensus 231 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~ 302 (454)
++.++.. .....+.+.+-....+...-..+||+... .+.+..+.+...+..+..+.+.+-.+.+|+++.|.|
T Consensus 221 k~~~~~~~~~~~~~~~~~~~~~~~~~~v~~lrn~p~~~~i~~~~i~~l~~~ly~~l~s~~~~t~~~l~~~rfg~ss~~~G 300 (451)
T KOG2615|consen 221 KRNDEHSTLQEAADDRLALLKFARIFKVAALRNPPLLDFISVLRIFGLHYFLYLELFSGLENTVLFLTHGRFGYSSMQQG 300 (451)
T ss_pred hhcccccchhhhhhhhhhhcchhhhhhhhhhcCccccchHHHHHHHHHHHHHHHHHHHHHHhhHHHhhcCccCCChhhhe
Confidence 3321111 00000000000000011111234554332 234444555545555555555555667899999999
Q ss_pred hHhHHHHHHHHHHHHHHHHHhhhhhhcCccchhhHHHHHHHHHHHHHHHHHHhhccChhHHHHHHHHHHHhhhhhhcchh
Q 012902 303 LFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLCMACSQGTDAFSQSGL 382 (454)
Q Consensus 303 ~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (454)
.+++..++.+.+.+....+..||.... ........+..+...+...........+.....+..+......+..
T Consensus 301 ~vl~~tGl~m~~~ql~~~~~l~~~~~~-------~~a~l~~~l~~~vP~~llls~~~~~~~l~~~s~l~sf~~A~~vt~L 373 (451)
T KOG2615|consen 301 KVLSTTGLLMLVIQLALVPILPRYKGN-------IKAVLLFSLLLIVPAFLLLSLARTPVVLYLGSTLKSFSTASVVTCL 373 (451)
T ss_pred eeeehhhHHHHHHHHhccccccccccc-------hhhHHHHHHHHHHHHHHHHhccccchhhhHHHHHHHHHHHHhhHHH
Confidence 999999888887777777766666522 1122233333333333333333444444444444444455555666
Q ss_pred hhhhccccc-ccchhHHHHHHHHHHHHHHHHHHHHHHHhcc-CCchhHHHHHHHHHHHH
Q 012902 383 YSNHQDIAP-RYSGVLLGLSNTAGVLAGVFGTAATGYILQH-GSWDDVFKVSVGLYLVG 439 (454)
Q Consensus 383 ~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~-~g~~~~~~~~~~~~~~~ 439 (454)
....+...| ++||+++|+..+.+.++.++||.+.|.+..+ .+-+..+..-+.+.+..
T Consensus 374 t~Lv~~~~~~~qrG~~~Gi~~Sl~alaRaiGPlv~g~i~~Ws~~~~~a~~~~~~L~~~~ 432 (451)
T KOG2615|consen 374 TSLVHKYGPQSQRGTLNGIFRSLGALARAIGPLVSGVIFSWSQGAQPAYIAWGALLLIP 432 (451)
T ss_pred HHHHHhcCCcccchHHHHHHHHHHHHHHHhhhhhhheeEEEecCCCceeeehHHHHHHH
Confidence 666655554 7899999999999999999999999998877 34444444444444333
No 92
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=99.96 E-value=8e-27 Score=203.31 Aligned_cols=394 Identities=13% Similarity=0.124 Sum_probs=268.1
Q ss_pred chHHHHHHHHHHHHHHHHhhhchhhhhcchhhhhhcCCChhhHHHHHHHHHHHHHHhhhhhhhhhccccchHHHHHHHHH
Q 012902 41 SYKQIISLCVGNFEQIFIVFGQVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVW 120 (454)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~ 120 (454)
.++..........+ .+.+.....+.+.|.+.+.+|.+..+..++......+..+++..+|..+|++|||+...+..+.
T Consensus 75 fq~yl~~~ag~gwm--ad~m~~m~~s~i~~~l~~~w~~s~~q~~llt~~v~~gmllga~~w~l~~d~~grr~~f~~T~l~ 152 (528)
T KOG0253|consen 75 FQWYLFFVAGMGWM--ADAMEMMLLSLILPALDEVWGPSEGQAPLLTLSVFLGMLVGAMVWGLSADTIGRRKGFNLTFLV 152 (528)
T ss_pred chhhHHHHhhhHHH--HHHHHHHHHHHHHHHHHhhhchhhhhhhHHHHHHHhhhhhhhhhhheehhhhhcchhhhhhHHH
Confidence 34555555555555 6666666777788889999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhhhcccccHHHHHHHHHHHHhhcccchhhhhHHHhhhcCccchHHHHHHHHhhHHHHHHhHHhHHHHHhhccC
Q 012902 121 WSIATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFG 200 (454)
Q Consensus 121 ~~~~~~l~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~ig~~l~~~l~~~~g 200 (454)
..+...+.+.++ |+..+.+.|.+.|+|.|+ .|...++-.|..|..+|...+-.. +.+.+|.+....+.-....++|
T Consensus 153 t~v~~~is~~sp--nf~~L~~f~~l~~~g~gg-~pv~~~~yle~lp~~~r~~~~V~~-~~waig~v~ea~law~vm~~~g 228 (528)
T KOG0253|consen 153 TGVFGVISGASP--NFASLCVFRALWGFGVGG-LPVDSAIYLEFLPSSHRWLLTVMS-FFWAIGQVFEALLAWGVMSNFG 228 (528)
T ss_pred HHHHHHhhcCCC--CeehhhHHHHHHhccCCC-ccHhHHHHHHhccCcCCCcchhHH-HHHHHHHHHHHHHHHHHHHhhh
Confidence 999999999999 999999999999999998 899899999999988988877766 8999999999999999999999
Q ss_pred cchhHHHHhHHHHHHHHHHHHhcCCCCCCCCCCChhhhhhh------------------------hhcccc---------
Q 012902 201 WPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLI------------------------VSSCAS--------- 247 (454)
Q Consensus 201 wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------~~~~~~--------- 247 (454)
|||.....+. .+..+....+..+|+|+..-....+++... +.++++
T Consensus 229 wr~~l~~~~~-pl~~~a~f~~w~~ESpRf~~~~G~~~kAletL~kiArmNg~qlplgvl~~s~~~~~e~e~~~~~~~~~~ 307 (528)
T KOG0253|consen 229 WRYLLFTSST-PLMFAARFLVWVYESPRFYLAKGDDYKALETLHKIARMNGKQLPLGVLESSAIDRQEQEESDLDDSKSS 307 (528)
T ss_pred HHHHHHHHHh-HHHHHHHHHhhcccCcchhhhcCChHHHHHHHHHHHHhcCCCCCcceeeeehhhhhhhhhhchhhhhhc
Confidence 9998888774 444445566678999875322221111100 000000
Q ss_pred CCCCCCcchhHhhc---CcchHHHHHHHHHHHHHHHHHHhhHHHHHHHHh-------------------CCcccchhhHh
Q 012902 248 KEPVKTIPWGLILS---KPPVWALIVSHFCHNWGTFILLTWMPTYYNQVL-------------------HFNLTESGLFC 305 (454)
Q Consensus 248 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-------------------g~s~~~~~~~~ 305 (454)
..++...+..+++. ++....+...++...+.+++.........+... ..+...--.-.
T Consensus 308 a~ke~rg~~~nLlsp~lrkttlllw~iwfgnafsyyg~VLlttelfqsgd~c~~~~r~~p~e~e~~~~c~~s~~~dYrdl 387 (528)
T KOG0253|consen 308 AAKEVRGGTTNLLSPKLRKTTLLLWRIWFGNAFSYYGSVLLTTELFQSGDACPLYNRFLPTELETRANCPLSVAKDYRDL 387 (528)
T ss_pred cccccccchHhhcChHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccCccccchhcchhHHHhhhcCCccchhHHHHH
Confidence 00011122222221 122223444455555555555444333333211 11111122233
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhcCccchhhHHHHHHHHHHHHHHHHHHhhccChhHHHHHHHHHHHhhhhhhcchhhhh
Q 012902 306 VLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLCMACSQGTDAFSQSGLYSN 385 (454)
Q Consensus 306 ~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (454)
....+....|.++.+++.||+|||+ .++..++.++++.+...............+.+-.+........+.+
T Consensus 388 litslaefPGlLIt~~iverlGRKk---------TMal~l~~f~iflfll~~c~~rn~~tvllf~arafisg~fqvaYvY 458 (528)
T KOG0253|consen 388 LITSLAEFPGLLITGVIVERLGRKK---------TMALSLILFGIFLFLLTTCKTRNAYTVLLFTARAFISGAFQVAYVY 458 (528)
T ss_pred HHHHHhhCCchhHHHHHHHHhcchh---------HHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHhchheEEEEe
Confidence 4556788899999999999999994 2333444444444443333333333444444444455555667777
Q ss_pred hccccc-ccchhHHHHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHHHHhccCCcc
Q 012902 386 HQDIAP-RYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWNLFSTGEKV 452 (454)
Q Consensus 386 ~~~~~~-~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 452 (454)
..|++| ..|+++.|....+..+|+++.|.++ +....+...+..+.+.+++++.++..++.-++|.
T Consensus 459 tPEVyPTavRatgvGtcSsmaRIggI~~p~iA--~~~e~s~sl~i~vy~~~~ilagIavcffPiEtkG 524 (528)
T KOG0253|consen 459 TPEVYPTAVRATGVGTCSSMARIGGIFSPVIA--MRAELSTSLPIFVYGALFILAGIAVCFFPIETKG 524 (528)
T ss_pred cCcccchhhhhcchhhhhhHHhhhhhhhhHHH--HHhccceeehHHHHHHHHHHHHHHheeeeeccCC
Confidence 777777 5899999999999999999999998 4333444455555556666666666666555443
No 93
>PTZ00207 hypothetical protein; Provisional
Probab=99.95 E-value=2.7e-25 Score=214.80 Aligned_cols=378 Identities=13% Similarity=0.070 Sum_probs=265.7
Q ss_pred hchhhhhcchhhhhhcCCChhhHHHHHHHHHHHHHHhhhhhhhhhccccchHHHHHHHHHHHHHHhhhhhc------ccc
Q 012902 61 GQVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVA------AKL 134 (454)
Q Consensus 61 ~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~l~~~~------~~~ 134 (454)
..+.++...|++++++|+|..+++++.++. .....++++.|++.||+|+|+++.++.++++++.++++++ +
T Consensus 42 ~~y~fsv~s~~L~~~lgls~~~l~~i~svg-~~~g~~~lp~G~L~Dr~G~R~vllig~ll~~iG~ll~ala~~~~i~~-- 118 (591)
T PTZ00207 42 FMYAFNLISGAMQARYNLTQRDLSTITTVG-IAVGYFLLPYSFIYDYLGPRPIFVLSMTVFCLGTLLFALTFQEVIEG-- 118 (591)
T ss_pred HHHHHHHHHHHHHHHhCcCHHHHHHHHHHH-HHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhcccccC--
Confidence 334566777899999999999999998874 4556778889999999999999999999999999999987 5
Q ss_pred cHHHHHHHHHHHHhhcccchhhhhHHHhhhcCccchHHHHHHHHhhHHHHHHhHHhHHHHHhhccCcchhHHHHhHHHHH
Q 012902 135 GLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTV 214 (454)
Q Consensus 135 ~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~ig~~l~~~l~~~~gwr~~f~~~~~~~~~ 214 (454)
+++.+.+.|++.|+|.+...+.....+.+|+| ++||++.|+...+.++|.++.+.+...+.. .+|+..|++.++++++
T Consensus 119 s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~-~~~~~~fl~l~vl~~v 196 (591)
T PTZ00207 119 SVVRLSVYNGLMTLGCMLFDLGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQLAFFS-DNTSAYFFFLMSFALV 196 (591)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHH
Confidence 89999999999999999999999999999996 789999999999999999865444444433 3688999999998888
Q ss_pred HHHHHHHhcCCCCCCCC-----CCChhhhh-----------------h--------------------------------
Q 012902 215 WFTVWLSKAHSSPAEDP-----QLRPAEKK-----------------L-------------------------------- 240 (454)
Q Consensus 215 ~~~~~~~~~~~~~~~~~-----~~~~~~~~-----------------~-------------------------------- 240 (454)
..++.+.+.++.|.+.. +.+++++. .
T Consensus 197 v~ll~~~~vr~p~~~~~~~~~~~~~~~~~~~~~~~~~~y~~q~~p~~~f~~~~~i~~~l~~yl~~~~~~~~~~~~~~~~~ 276 (591)
T PTZ00207 197 VGILAIVFMRLPPFHLTGYQEKHLDEEEKAQRLMRKGVYLKQKAPMWRFVYGFVILIILIVFLPLQGALVAYLKLGSNFK 276 (591)
T ss_pred HHHHHHhheeCCcchhhcccccCCCHHHHHHHhhhhhhhhhcCCCceehhhHHHHHHHHHHHHHHHHHHHHHhcccHHHH
Confidence 87777776665543211 11122221 0
Q ss_pred -------h------h--------------h-ccc-------------------------c-CCCCCCcchhHhhcCcchH
Q 012902 241 -------I------V--------------S-SCA-------------------------S-KEPVKTIPWGLILSKPPVW 266 (454)
Q Consensus 241 -------~------~--------------~-~~~-------------------------~-~~~~~~~~~~~~~~~~~~~ 266 (454)
. . + +.+ + ..|....++++.+++.++|
T Consensus 277 ~~~~~v~~~lll~~p~l~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~t~~q~l~~~d~W 356 (591)
T PTZ00207 277 VGFAVTVIVLTVIFPFMAFPLTTFDGKRPHDDSDGKAKEHVEAGEEVSAAEDKVVETDVDYIAPQFQETFIEGLKTARLW 356 (591)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHhccCCcCCCccccccccccccccccccccccccccccCCCCCCcchHHHHHhchhHH
Confidence 0 0 0 000 0 0011122667788899999
Q ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHhCCcccc--hhhHhHHHHHHHHHHHHHHHHHhhhhhhcCc---cchhhHHHHH
Q 012902 267 ALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTE--SGLFCVLPWLTMAFSANLGGWIADTLVSKGL---SVTTVRKIMQ 341 (454)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~--~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~---~~~~~~~~~~ 341 (454)
.+....++...........+.++.+..-|.+.++ ..++.+..++++.+|++..|.+.....+|+. ... ...+
T Consensus 357 ll~~~~~cg~g~gl~~~~N~~qI~~sl~g~~~~~~~~~~~vsL~si~~~~GRl~~g~~~~~~~~~~~~~r~pr---t~~l 433 (591)
T PTZ00207 357 CLLWSIFCCVGAHFVIIFNARFIYTALAGEAPDDALNTLLTVLNGVGSAVGRLCMSYFEIWSQKRRAEDRVPI---TIAL 433 (591)
T ss_pred HHHHHHHHhhCchheeeecHHHHHHHhcCCCCCccceeeehhhhhHHHHhhHHHHHHHHHHHHhhccccccch---hHHH
Confidence 9999999988888888888888888743663333 3337888999999999999998833333331 221 1222
Q ss_pred HHHHHHHHHHHHHhhccChhHHHHHHHHHHHhhhhhhcchhhhhhcccccccchhHHHHHHHHHHHHHHHH-HHHHHHHh
Q 012902 342 SIGFLGPAFFLTQLSHVDSPAMAVLCMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFG-TAATGYIL 420 (454)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~-~~~~g~l~ 420 (454)
.+..+.....+......+.....+...+.+.+.+... +.......++..++-|+-.-+.....-+|..+- -.+.|.++
T Consensus 434 ~~~~~~~~~~lll~~~~p~~~L~~~~~lvg~~~G~~~-~~~~~i~selFgk~~g~~yN~~~~a~pigs~~~n~~l~G~~Y 512 (591)
T PTZ00207 434 FIPSVCIITMLTLFLTLPKAALPLPYFIAAFANGFMA-ATIALVTRTIFAKDPAKHYNFCFLGSVLSAIFLNRLLYGEWY 512 (591)
T ss_pred HHHHHHHHHHHHHHHHCCccHhHHHHHHHHHHhhHhH-HHHHHHHHHHhccchHHHhhHHhHHHHHHHHHHHHHHHHHHH
Confidence 2222222222222222222344555555555555444 455555555555889998888888888888766 57888898
Q ss_pred ccC----------C---chhHHHHHHHHHHHHHHHHHHhc
Q 012902 421 QHG----------S---WDDVFKVSVGLYLVGTAVWNLFS 447 (454)
Q Consensus 421 ~~~----------g---~~~~~~~~~~~~~~~~~~~~~~~ 447 (454)
|.. | ++..|.+.+++++.+.++...+.
T Consensus 513 d~ea~k~~~~~C~G~~C~~~~~~v~~~~~~~g~~~s~~l~ 552 (591)
T PTZ00207 513 TQQADKLGQDVCTERVCVVMPLAFLLGLSFLAFITSTYVH 552 (591)
T ss_pred HHHHhhCCCCeeCCceeeHhHHHHHHHHHHHHHHHHhhee
Confidence 761 1 66789999888888887766554
No 94
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=99.95 E-value=1.1e-27 Score=215.05 Aligned_cols=392 Identities=16% Similarity=0.156 Sum_probs=268.2
Q ss_pred HHHHHHHHHHHHHHHHhhhchhhhhcchhhhhhc-C-------CChhhHHHHHHHHHHHHHHhhhhhhhhhccccchHHH
Q 012902 43 KQIISLCVGNFEQIFIVFGQVNMSIAILPMSAEF-N-------WNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVL 114 (454)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~-~-------~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~ 114 (454)
.+.+.+...+++ .+.+|...++.+.|-+...+ + .++...+.+..+..+|..+||++.|++.||+|||+++
T Consensus 40 fk~i~iAG~Gff--tDsYDlF~I~lVt~il~~lY~~~~~~~g~~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~GRK~vY 117 (538)
T KOG0252|consen 40 FKAIIIAGMGFF--TDSYDLFSISLVTKILGYLYYHGDESGGHYPSGVLALVNAAALVGTIFGQLFFGWLGDKFGRKKVY 117 (538)
T ss_pred HHHHHHhhhhhc--ccchhhhhHHHHHHHHHHHhcCCCCCCCcCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhcchhhh
Confidence 345555556666 89999999998888776554 2 4456678899999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhhhcccc-----cHHHHHHHHHHHHhhcccchhhhhHHHhhhcCccchHHHHHHHHhhHHHHHHhHH
Q 012902 115 GFGVVWWSIATALTPVAAKL-----GLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGL 189 (454)
Q Consensus 115 ~~~~~~~~~~~~l~~~~~~~-----~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~ig~ 189 (454)
...++++.+++++++++... -++++...|++.|+|.|+.+|.+.++.+|...+++||...+.+.+..+.|...|.
T Consensus 118 G~~liImIi~t~~~~~s~~~~~~~~~m~~L~~~R~~LGiGIGGDYPlSAtI~SE~an~~~RGa~iaavFa~Qg~GilaG~ 197 (538)
T KOG0252|consen 118 GKELIIMIICSALSGLSVGTTSPLGVMMTLCFFRFLLGIGIGGDYPLSATIMSESANKKTRGAFIAAVFAMQGFGILAGG 197 (538)
T ss_pred hHHHHHHHHHHHHhccCCCCCCCcchhhHHHHHHHHhhccccCCCcchHHHhhhhhhhccccceeEEEEEecchhHhhcc
Confidence 99999999999988776421 2467888999999999999999999999999999999999999888888888887
Q ss_pred hHHHHHhhc---------------cCcchhHHHHhHHHHHHHHHHHHhcCCCCCCCCCCChh------hhhhhhh-----
Q 012902 190 AFSPFLIHR---------------FGWPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPA------EKKLIVS----- 243 (454)
Q Consensus 190 ~l~~~l~~~---------------~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~----- 243 (454)
+++-.+... .-||..|.+..+++++. +......||+++.+....++ +.+...+
T Consensus 198 ivt~Iv~~~fe~~~~~~~~~~~ld~vWRl~~glg~vpa~~~-ly~Rl~M~Et~~Y~al~~~~~~~a~~d~~k~~~~~~~~ 276 (538)
T KOG0252|consen 198 IVALIVSAIFEKIFNGPSTYPHLDGVWRIIFGLGAVPALLV-LYFRLKMPETARYTALVSKKLKQAAGDMKKVLSVDIEA 276 (538)
T ss_pred HHHHHHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHH-HHhhhcCCcchhHHHHhhcCHhhhhhccccccccccch
Confidence 766555421 12999988877766665 34444567776543100000 0000000
Q ss_pred -cc-ccCCCCCCcc---hhH-hhc--CcchHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCcccchhh--------HhH-
Q 012902 244 -SC-ASKEPVKTIP---WGL-ILS--KPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGL--------FCV- 306 (454)
Q Consensus 244 -~~-~~~~~~~~~~---~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~--------~~~- 306 (454)
+. ....+.+... +.. .++ -+.....+..+|+...+++....+....++. .|+.+.+... ...
T Consensus 277 ~~~~~~~~~~~~~~~~~F~~~f~~~hg~~Llgt~~~WFllDiafy~~nL~~s~I~~~-ig~~~~~~~~~~~~~vA~~~~i 355 (538)
T KOG0252|consen 277 ESTAESDVPPPSNSFGLFSRLFLRWHGKHLLGTAGTWFLLDIAFYGQNLFQSVIFSA-IGVIPSANTYHELFKVAEGNLI 355 (538)
T ss_pred hhccccCCCCcccccchHHHHHHHHHHHHHHHHHHHHHhhhhhhhccccHHHHHHHh-hccCCCcchHHHHHHHHHHHHH
Confidence 00 0001111111 111 112 2455567778888888889988888888887 4776655544 111
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhcCccchhhHHHHHHHHHHHHHHHHHHhhccCh-----hHHHHHHHHHHHhhhhhhcch
Q 012902 307 LPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDS-----PAMAVLCMACSQGTDAFSQSG 381 (454)
Q Consensus 307 ~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~ 381 (454)
+.....++|..+...++|++||+.. ...++....++.+......+ ....+...+..++........
T Consensus 356 ia~~~~vPGyw~tv~~id~iGRk~i---------q~~GF~~~~i~~~~~~~~y~~~~~~~Gf~v~y~l~~ff~NFGPn~t 426 (538)
T KOG0252|consen 356 IAVCSTVPGYWFTVYFIDIIGRKYI---------QLMGFFIMTIFFFVIAGPYNQLENTIGFVVLYSLTFFFGNFGPNAT 426 (538)
T ss_pred HHHHccCCceeEEEEEeehhhhHHH---------HHhhHHHHHHHHHHHcCCcccccccCceeehHHHHHHHHhcCCCce
Confidence 1112233355566678999999943 33333333333332222211 112222223333333333344
Q ss_pred hhhhhccccc-ccchhHHHHHHHHHHHHHHHHHHHHHHHhc-----cCCchhHHHHHHHHHHHHHHHHHHhc
Q 012902 382 LYSNHQDIAP-RYSGVLLGLSNTAGVLAGVFGTAATGYILQ-----HGSWDDVFKVSVGLYLVGTAVWNLFS 447 (454)
Q Consensus 382 ~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~-----~~g~~~~~~~~~~~~~~~~~~~~~~~ 447 (454)
...+..+..| +.|++..|+....+.+|+.++....+++.+ ..+.+.++++.+.+++++.+..+++.
T Consensus 427 tfivpaE~FParvR~t~hGIsAA~GK~GAivg~~~F~~~t~~~yp~~~g~~~v~~i~~~~~~~gi~~T~l~p 498 (538)
T KOG0252|consen 427 TFIVPAEIFPARVRSTCHGISAASGKAGAIVGAFGFLYLTDHNYPPNIGVRNVFIILAGCMLLGILFTLLIP 498 (538)
T ss_pred eEEeehhhchHHHhhhhhhHHHHhccchHHHHHHHhhHhhhccCCccccchHHHHHHHHHHHHhHheeEEee
Confidence 4455566666 789999999999999999999999999999 68999999999999999998887776
No 95
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.95 E-value=3.5e-25 Score=204.05 Aligned_cols=342 Identities=11% Similarity=0.062 Sum_probs=239.9
Q ss_pred hchhhhhcchhhhhhcCCChhh-HHHHHHHHHHHHHHhhhhhhhhhccccchHHHHHHHHHHHHHHhhhhhcccccHHHH
Q 012902 61 GQVNMSIAILPMSAEFNWNPAT-VGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFL 139 (454)
Q Consensus 61 ~~~~~~~~~~~i~~~~~~s~~~-~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~l~~~~~~~~~~~l 139 (454)
-+...+.+.|++.+|+|+|+++ .|.+.+++..++++.+++.|.++||+|.|+++..+.+.+++.+++.++++ ++..+
T Consensus 41 ~R~n~s~a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~fa~--Sl~~L 118 (511)
T TIGR00806 41 FRPGESFITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCVWLLLLLGT--SVWHM 118 (511)
T ss_pred hhchHHHHHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHH--HHHHH
Confidence 4667788899999999999999 99999999999999999999999999999999999999999999999999 99999
Q ss_pred HHHHHHHHhhcccchhhhhHHHhhhcCccchHHHHHHHHhhHHHHHHhHHhHHHHHhhccCcchhHHHH--hHHHHHHHH
Q 012902 140 LVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSF--GSLGTVWFT 217 (454)
Q Consensus 140 ~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~ig~~l~~~l~~~~gwr~~f~~~--~~~~~~~~~ 217 (454)
.+.|++.|++.|..+ +...++.+|+|+++|+++.|+..++..+|.++++++++. ...+|||+-+.+. ...+....+
T Consensus 119 ~i~R~llGvaEA~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~ql-l~s~gWr~y~~Ln~Isl~s~~~a~ 196 (511)
T TIGR00806 119 QLMEVFYSVTMAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQL-LVTLGWISYSTLNIISLVFMTFSV 196 (511)
T ss_pred HHHHHHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhcCchhHHHHHHHHHHHHHHHH
Confidence 999999999999999 999999999999999999999999999999999999999 5568999866543 223333344
Q ss_pred HHHHhcCCCCCCC---CCC-Ch----hhhhhhhhccc-cCC--CC---------CCcchhHhhcCcchHHHHHHHHHHHH
Q 012902 218 VWLSKAHSSPAED---PQL-RP----AEKKLIVSSCA-SKE--PV---------KTIPWGLILSKPPVWALIVSHFCHNW 277 (454)
Q Consensus 218 ~~~~~~~~~~~~~---~~~-~~----~~~~~~~~~~~-~~~--~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (454)
++.+++|..++.. ++. .+ .+.+....+.. .+. ++ -...+++..+||.++.-.+-+.+...
T Consensus 197 ~~a~~LP~~~~sl~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~y~n~~vl~WSlWwa~a~~ 276 (511)
T TIGR00806 197 FLALFLKRPKRSLFFNRLEDVRGALPCELDQMVPGPGGKLEDYLGTCRDSFLVRMLSELVTIYRNPQLLLWSLWWVFNSA 276 (511)
T ss_pred HHHHhCCCCchhhhhccccccccccccccccCCCCCccccchhhhhhhhHHHHHHHHHHHHHhcCcchhhhhHHHHHHhh
Confidence 5555566443310 000 00 00000000000 000 00 01234556788988888888888888
Q ss_pred HHHHHHhhHHHHHHHHhCCcccchhhHhHHHHHHHHHHHHHHHHHhhhhhhcCccchhhHHHHHHHHHHHHHHHHHHhhc
Q 012902 278 GTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSH 357 (454)
Q Consensus 278 ~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (454)
+++-+.+|....-++.-+-++..-|.+-++..+.+.+..+..|++-.++.+. ....+.+..++.+..++....
T Consensus 277 g~~qv~~Y~Q~LW~~v~~~~~~yNG~veA~~tllga~~a~~ag~~~~~w~~~-------~~l~l~v~s~~~~gll~~m~~ 349 (511)
T TIGR00806 277 GYYLITYYVHTLWGTLDESLNKYNGAVDAASTLLGAITSFIAGFVNIRWARW-------SKLLIAVVSAIQAGLVFWMSQ 349 (511)
T ss_pred HHHHHHHHHHHHHHHcCCCccccCCHHHHHHHHHHHHHHHHHHhhcCCchhh-------HHHHHHHHHHHHHHHhhhhhc
Confidence 8887777776665554232222456666777778888888888885555332 224444444444444555555
Q ss_pred cChhHHHHHHHHHHHhhh-hhhcchhhhhhcccccccchhHHHHHHHHHHHHHHHHH
Q 012902 358 VDSPAMAVLCMACSQGTD-AFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGT 413 (454)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~ 413 (454)
.++.|......++..... .............+..|..|...|+.+++.-+-..+-.
T Consensus 350 t~~Iw~~Y~~yvlf~~~y~flitia~~~iA~~L~~~~~aLvFGiNtfvAl~LQtilT 406 (511)
T TIGR00806 350 SHDIWVLYVTYVLFRGIYQFLVPIATFQIASSLSKELCALVFGINTFVATALKTIIT 406 (511)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccceEEEEecHHHHHHHHHHheE
Confidence 566666555554444443 33333444445566667789999997766555444433
No 96
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.94 E-value=1.3e-23 Score=199.21 Aligned_cols=395 Identities=14% Similarity=0.066 Sum_probs=266.2
Q ss_pred hHHHHHHHHHHHHHHHHhhhchhhhhcchhhhhhcCCChhhHHHHHHHHHHHHHHhhhhhhhhhc----cccchHHHHH-
Q 012902 42 YKQIISLCVGNFEQIFIVFGQVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWAD----TVGGKAVLGF- 116 (454)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~d----r~Grr~~~~~- 116 (454)
+|+++.++...+. ..+......+..+++.+++|.+..+.+++..+..+...+.+|+.|+++| |+||||.++.
T Consensus 3 ~~~li~~~~~~~G---iq~~~~l~~~~l~~yl~~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~ 79 (477)
T TIGR01301 3 LRKLLRVASVAAG---VQFGWALQLSLLTPYVQELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAA 79 (477)
T ss_pred HHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHH
Confidence 3555555555544 4555666666677788899999999999999999999999999999999 5999999776
Q ss_pred HHHHHHHHHhhhhhcccccHH-----------------HHHHHHHHHHhhcccchhhhhHHHhhhcCccch--HHHHHHH
Q 012902 117 GVVWWSIATALTPVAAKLGLP-----------------FLLVVRVFMGIGEGVAMPAMNNILSKWVPVAER--SRSLALV 177 (454)
Q Consensus 117 ~~~~~~~~~~l~~~~~~~~~~-----------------~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r--g~~~~~~ 177 (454)
+.+...++..+.++++ +.+ .++++-.+..++.....++..++++|.+|+++| +.+.++.
T Consensus 80 g~~~~~~~l~ll~~~~--~~~~~~~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~ 157 (477)
T TIGR01301 80 GAALVAFAVILIGFAA--DIGHLFGDNLDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAYF 157 (477)
T ss_pred HHHHHHHHHHHHHhCc--hhhhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHHH
Confidence 4667777777777776 432 223333344557777888899999999998765 6899999
Q ss_pred HhhHHHHHHhHHhHHHHH--hhcc-------------CcchhHHHHhHHHHHHHHHHHHhcCCCCCCCCCCChhhhhhhh
Q 012902 178 YSGMYLGSVTGLAFSPFL--IHRF-------------GWPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIV 242 (454)
Q Consensus 178 ~~~~~~g~~ig~~l~~~l--~~~~-------------gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (454)
+...++|.++|+.+++.. .+.+ +.|..|++.+++.++..++..+..+|.|..+++..+++ +.
T Consensus 158 ~~~~~lG~ilg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~~~~~~~~~~~-~~-- 234 (477)
T TIGR01301 158 SFFMAIGNVLGYAAGAYSGLYKIFPFTKTEACGVSCANLKSCFLIDIILLAILTYIALSAVKENPLIGSDDFINS-EA-- 234 (477)
T ss_pred HHHHHHHHHHHHHHHHHHhHHHhcccccccccccccchHHHHHHHHHHHHHHHHHHHeeeeeccCCCccccchhh-hc--
Confidence 999999999999999875 2221 56889999988888888888888888764322111100 00
Q ss_pred hccccCCCCCCcchhHhhc-----CcchHHHHHHHHHHHHHHHHHHhhHHHHHHH-HhCCcccc----------hhhHhH
Q 012902 243 SSCASKEPVKTIPWGLILS-----KPPVWALIVSHFCHNWGTFILLTWMPTYYNQ-VLHFNLTE----------SGLFCV 306 (454)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~g~s~~~----------~~~~~~ 306 (454)
++.++......++++++ .|.++.+++..++.+++++.+..|.+.|+.+ .++-++.+ ..+...
T Consensus 235 --~~~~~~~~~~~~~~i~~~~~~mP~~m~~l~~vqffsW~a~f~~~~y~T~~vg~~v~~~~~~~~~~y~~gvr~G~~~l~ 312 (477)
T TIGR01301 235 --APPSKHGEEAFFGELFGAFKYLPRPVWILLLVTCLNWIAWFPFILFDTDWMGREVYGGSVNQGAKYDDGVRAGAFGLM 312 (477)
T ss_pred --ccccccchhhhHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHcCCCCcchhHHHHHHHHHHHHHH
Confidence 00001111122333332 3578899999999999999999999988875 45543321 123344
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhcCccchhhHHHHHH--HHHHHHHHHHHHhhccC------------------hhHHHHH
Q 012902 307 LPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQS--IGFLGPAFFLTQLSHVD------------------SPAMAVL 366 (454)
Q Consensus 307 ~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~------------------~~~~~~~ 366 (454)
.+++...+.+++..++.+|+|+||.. .... +..++...........+ .......
T Consensus 313 ~~s~~~~i~s~~l~~l~~~~g~~k~~------~~~s~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 386 (477)
T TIGR01301 313 LNSVVLGITSIGMEKLCRGWGAGKRL------WGIVNIILAICLAATVLVTYVAKNSRYYDGDGESLPPPTGIKASALIV 386 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHhccchhH------HHHHHHHHHHHHHHHHHHHhhhhccccccccccccCcchhhHHHHHHH
Confidence 55556667777888899999864322 1112 11111111111111000 1333444
Q ss_pred HHHHHHhhhhhhcchhhhhhccccc--ccchhHHHHHHHHHHHHHHHHHHHHHHHhcc--CCchhHHHHHHHHHHHHHHH
Q 012902 367 CMACSQGTDAFSQSGLYSNHQDIAP--RYSGVLLGLSNTAGVLAGVFGTAATGYILQH--GSWDDVFKVSVGLYLVGTAV 442 (454)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~--~g~~~~~~~~~~~~~~~~~~ 442 (454)
+..+|.........+.....++.++ +..|..+|+.|.+-.+.+.+.....|.+.+. .+...++.+.++..+++.+.
T Consensus 387 ~~~~Gi~~A~~~siPfal~s~~~~~~~~~~G~~mgilN~~I~lpQii~sl~~g~~~~~~g~~~~~~~~~~gv~~~~aa~~ 466 (477)
T TIGR01301 387 FAILGIPLAITYSIPFALASIRSSNLGAGQGLSMGVLNLAIVIPQIIVSLGSGPWDQLFGGGNLPAFVVGAVAAFVSGLL 466 (477)
T ss_pred HHHhhHHHHHHHHHhHHHHHHHccccCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHcCCCCeeHHHHHHHHHHHHHHH
Confidence 5555555555555555555566664 4679999999999999999999988886555 34567888888888888887
Q ss_pred HHHhccCCcc
Q 012902 443 WNLFSTGEKV 452 (454)
Q Consensus 443 ~~~~~~~~~~ 452 (454)
..+..++.+.
T Consensus 467 ~~~~~~~~~~ 476 (477)
T TIGR01301 467 ALILLPRPRV 476 (477)
T ss_pred HHHhCCCCCC
Confidence 7777666543
No 97
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.94 E-value=6.6e-24 Score=206.60 Aligned_cols=382 Identities=15% Similarity=0.118 Sum_probs=227.6
Q ss_pred Hhhhchhhhhcc-hhhhhhcCCChhhHHHHHHHHHHHHHHhhhhhhhhhcc-ccchHHHHHHHHHHHHHHhhhhhccccc
Q 012902 58 IVFGQVNMSIAI-LPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADT-VGGKAVLGFGVVWWSIATALTPVAAKLG 135 (454)
Q Consensus 58 ~~~~~~~~~~~~-~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr-~Grr~~~~~~~~~~~~~~~l~~~~~~~~ 135 (454)
..+..+.....+ .++.+++|.+.++.+++.+.+........+++|+++|| +|||+.+..+.++.+++..++++++. +
T Consensus 33 ~~~~~y~~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~g~~~~~ig~~l~~~~~~-~ 111 (500)
T PRK09584 33 ERFGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAIVLAIGYALVAWSGH-D 111 (500)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhcc-c
Confidence 444434444444 44678999999999999888877777777899999999 59999999999999999999988751 4
Q ss_pred HHHHHHHHHHHHhhcccchhhhhHHHhhhcCccc--hHHHHHHHHhhHHHHHHhHHhHHHHHhhccCcchhHHHHhHHHH
Q 012902 136 LPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAE--RSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGT 213 (454)
Q Consensus 136 ~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~--rg~~~~~~~~~~~~g~~ig~~l~~~l~~~~gwr~~f~~~~~~~~ 213 (454)
.+.++++|+++|++.|...+...++++|++|+++ |..++++++.+.++|..+||.+++++.+++|||+.|++.++..+
T Consensus 112 ~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~i~g~l~~~~g~~~~F~i~~i~~~ 191 (500)
T PRK09584 112 AGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLATPWLAAKYGWSVAFALSVVGML 191 (500)
T ss_pred HHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHH
Confidence 5667788999999999999999999999997653 45688999999999999999999999999999999999875444
Q ss_pred HHHH---HHHHhcCCCCCCCCCCChhhhhhh------------hh-ccccCCCCC-----------------CcchhHhh
Q 012902 214 VWFT---VWLSKAHSSPAEDPQLRPAEKKLI------------VS-SCASKEPVK-----------------TIPWGLIL 260 (454)
Q Consensus 214 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~------------~~-~~~~~~~~~-----------------~~~~~~~~ 260 (454)
+..+ ......+|.++++++.+.+..... .. ....++... ....++.-
T Consensus 192 i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (500)
T PRK09584 192 ITVVNFAFCQRWVKQYGSKPDFEPINYRKLLLTIVGVVALIAIATWLLHNQEIARMALGVVALGIVVIFGKEAFAMKGAA 271 (500)
T ss_pred HHHHHHHHhHHHhccCCCCCCccccchhhHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHhhcCHHH
Confidence 4332 222333333211111000000000 00 000000000 00001111
Q ss_pred cCcchHHHHHHHHHHHHHHHHHHhhHHHHHHH--HhCCcc------cchhhHhHHHHHHHHHHHHHHHHHhhhhhhcCcc
Q 012902 261 SKPPVWALIVSHFCHNWGTFILLTWMPTYYNQ--VLHFNL------TESGLFCVLPWLTMAFSANLGGWIADTLVSKGLS 332 (454)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~g~s~------~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~ 332 (454)
| ++.+.. +..+.....++......|.++.. ..+.+. ...+.+.+...+..++..++..++-+|.++|...
T Consensus 272 ~-~~~~~~-~~~~~~~i~f~~~~~q~~~~l~~~~~~~~~~~~~g~~i~~~~~~s~n~i~iil~~p~~~~~~~~l~~r~~~ 349 (500)
T PRK09584 272 R-RKMIVA-FILMLEAIIFFVLYSQMPTSLNFFAIRNVEHSILGIAVEPEQYQALNPFWIMIGSPILAAIYNKMGDRLPM 349 (500)
T ss_pred H-HHHHHH-HHHHHHHHHHHHHHHHhccHHHHHHHHhccccccceEECHHHHHHHhHHHHHHHHHHHHHHHHHhCcCCCc
Confidence 1 222222 22234444455555555555443 111221 2245666667777777777776776777666322
Q ss_pred chhhHHHHHHHHHHHHHHHHHHhhc--------cChhHHHHHHHHHHHhhhhhhcchhhhhhcccccccchhHHHHHHHH
Q 012902 333 VTTVRKIMQSIGFLGPAFFLTQLSH--------VDSPAMAVLCMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTA 404 (454)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 404 (454)
. .+......+.+.+........ .+.++......+.+.+.....+.......+..|++.||+++|+....
T Consensus 350 ~---~~~~~G~~l~~l~f~~l~~~~~~~~~~~~vs~~~~~~~~~l~~~ge~~~~p~g~s~~~~~aP~~~rg~~~g~~~l~ 426 (500)
T PRK09584 350 P---HKFAIGMVLCSGAFLVLPLGAKFANDAGIVSVNWLIASYGLQSIGELMISGLGLAMVAQLVPQRLMGFIMGSWFLT 426 (500)
T ss_pred H---HHHHHHHHHHHHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCcHHHHHHHHHHHHHH
Confidence 1 223332333222222221111 11234444444555555555555555555667778999999987666
Q ss_pred HHHHHHHHHHHHHHHhc----------cCCchhHHHHHHHHHHHHHHHHHH
Q 012902 405 GVLAGVFGTAATGYILQ----------HGSWDDVFKVSVGLYLVGTAVWNL 445 (454)
Q Consensus 405 ~~~g~~~~~~~~g~l~~----------~~g~~~~~~~~~~~~~~~~~~~~~ 445 (454)
..+|..++..+.+.... ..++...|...++..++..++.+.
T Consensus 427 ~a~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~a~~~~~ 477 (500)
T PRK09584 427 TAGAALIAGYVANLMAVPDNVTDPLMSLEVYGRVFLQIGIATAVIAVLMLL 477 (500)
T ss_pred HHHHHHHHHHHHHHhccccccccchhhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 66666666555542211 124677887777666544444433
No 98
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.94 E-value=2e-23 Score=195.69 Aligned_cols=367 Identities=14% Similarity=0.139 Sum_probs=254.8
Q ss_pred HhhhchhhhhcchhhhhhcCCChhhHHHHHHHHHHHHHHhhhhhhhhhcccc-chHHHHHHHHHHHHHHhhhhhcccccH
Q 012902 58 IVFGQVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVG-GKAVLGFGVVWWSIATALTPVAAKLGL 136 (454)
Q Consensus 58 ~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G-rr~~~~~~~~~~~~~~~l~~~~~~~~~ 136 (454)
.......+.|..+.+-++.|.|..|+|.+.+...+...+.++++|.++||++ +|+.+.+..++.++........+ ++
T Consensus 14 ~f~~~G~~~p~~~~~L~~~G~s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~~~~~~~~~~~~--~f 91 (400)
T PF03825_consen 14 YFFAYGAFLPYLPLYLESRGFSGTQIGILLAVGPLARIVSPPFWGAIADRFGSAKRILALLSLLSALALLLLAFSS--SF 91 (400)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHHHHHHHHHHHHHhc--cH
Confidence 4445556677788888889999999999999999999999999999999986 67777777777777777777777 88
Q ss_pred HHHHHHHHHHHhhcccchhhhhHHHhhhcCccchHHHHHHHHhhHHHHHHhHHhH-HHHHhhccC---cchhHHHHhHHH
Q 012902 137 PFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAF-SPFLIHRFG---WPSVFYSFGSLG 212 (454)
Q Consensus 137 ~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~ig~~l-~~~l~~~~g---wr~~f~~~~~~~ 212 (454)
+.+++.-++..+......|...++..+... +++.-.|-.....++|.+++... ++.+....+ ..+.+++.+...
T Consensus 92 ~~~~~~~~l~~~~~~p~~pl~dsi~~~~~~--~~~~~YG~iRlwGSiGf~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 169 (400)
T PF03825_consen 92 WWLFVIMLLFSFFFSPTMPLSDSIALSYLG--DRGKDYGRIRLWGSIGFIVAALAFGGLLGGYLGISGTSLIFYIAAILS 169 (400)
T ss_pred HHHHHHHHHHHHHHccHHHHHHHHHHHHcc--cccCCCCcchhhhhHHHHHHHHHHHHHHHhhhccccccHHHHHHHHHH
Confidence 888888888888888888888898888874 45556677777777777777544 233333333 234566665555
Q ss_pred HHHHHHHHHhcCCCCCCCCCCChhhhhhhhhccccCCCCCCcchhHhhcCcchHHHHHHHHHHHHHHHHHHhhHHHHHHH
Q 012902 213 TVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQ 292 (454)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 292 (454)
++.... .+.+|+.|++++.+++.++ ....+..+++|+|++....+..++..........+.+.|+++
T Consensus 170 ~ll~~~-~l~lp~~~~~~~~~~~~~~------------~~~~~~~~llk~~~~~~Fll~~~l~~~~~~~~~~f~~~yl~~ 236 (400)
T PF03825_consen 170 LLLAGF-ALFLPKTPPKRSAKESVKK------------LLGLDALKLLKNPRFLVFLLAAFLIGISHAAYYTFFSIYLQE 236 (400)
T ss_pred HHHHHH-HHhCCCCccccccCCCccc------------ccchHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444333 3335665532221111110 012233468999999999999999999999999999999999
Q ss_pred HhCCcccchhhHhHHHHHHHHHHHHHHHHHhhhhhhcCccchhhHHHHHHHHHHHHHHHHHHhhcc-Ch-hHHHHHHH--
Q 012902 293 VLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHV-DS-PAMAVLCM-- 368 (454)
Q Consensus 293 ~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~-- 368 (454)
..|.+....+...+...+..++.-...+++.+|+|.++ ++.++.+...+=....... ++ +.......
T Consensus 237 ~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~~---------ll~~a~~~~~vR~~l~a~~~~~~~~~~~~~~l~ 307 (400)
T PF03825_consen 237 LGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRFGIKW---------LLLLALVAYAVRWLLYAYFSDPWPFIVALQLLG 307 (400)
T ss_pred cccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHH---------HHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHH
Confidence 64478888888888888899999999999999999883 3334444433332222222 22 22222222
Q ss_pred --HHHHhhhhhhcchhhhhhcccccccchhHHHHHHHH-HHHHHHHHHHHHHHHhccCCchh------HHHHHHHHHHHH
Q 012902 369 --ACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTA-GVLAGVFGTAATGYILQHGSWDD------VFKVSVGLYLVG 439 (454)
Q Consensus 369 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~g~~~~~~~~g~l~~~~g~~~------~~~~~~~~~~~~ 439 (454)
+-+..++...........+..|++.|+++.++++.. ..+|..+|..++|+++|+.|.+. .+.+.+++.++.
T Consensus 308 q~lhG~tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~igG~l~~~~g~~~~~~~~~~~~v~a~~~~~~ 387 (400)
T PF03825_consen 308 QLLHGLTFGLFHAASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLIGGWLYDAFGARGMFDWSAVFLVFAVMALVI 387 (400)
T ss_pred HhhhhHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHHHHHH
Confidence 234444444545555555667778999999998875 57899999999999999976554 445555555555
Q ss_pred HHHHHHhccCC
Q 012902 440 TAVWNLFSTGE 450 (454)
Q Consensus 440 ~~~~~~~~~~~ 450 (454)
.+++.++.|++
T Consensus 388 ~~~f~~~fk~~ 398 (400)
T PF03825_consen 388 LVLFVILFKPK 398 (400)
T ss_pred HHHHHhhccCC
Confidence 55555554443
No 99
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=99.94 E-value=8.6e-24 Score=208.51 Aligned_cols=332 Identities=14% Similarity=0.082 Sum_probs=230.0
Q ss_pred hhhcCCChhhHHHHHHHHHHHHHHhhhhhhhhhccccchHHHHHHHHHHHHHHhhhhhcccccHHHHHHHHHHHHhhccc
Q 012902 73 SAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMGIGEGV 152 (454)
Q Consensus 73 ~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~r~l~G~~~g~ 152 (454)
.+.+..+.....+..+++.+|..+|++++|+++||+|||++++.+.++..++.++.++++ |++.+++.|+++|++.+.
T Consensus 110 ~~~~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~a~--~~~~~~~~Rfl~G~~~~~ 187 (521)
T KOG0255|consen 110 WNLVCDSSTLVALGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTAFAP--NYWMFLIFRFLSGFFGSG 187 (521)
T ss_pred hceeeCcHhHHHHHHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHHHHhC--cHHHHHHHHHHHHhhccc
Confidence 456677888999999999999999999999999999999999999999999999999999 999999999999999999
Q ss_pred chhhhhHHHhhhcCccchHHHHHHHHhhHHHHHHhHHhHHHHHhhccCcchhHHHHhHHHHHHHHHHHHhcCCCCCCCCC
Q 012902 153 AMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQ 232 (454)
Q Consensus 153 ~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~ig~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (454)
.......++.|++++++|+.+..+ ......+..++++.++++.+ +||+.+++..++.++.+++ ++..+|+|+....
T Consensus 188 ~~~~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~--~Wr~~~~~~~~~~~~~~~~-~~l~~Es~rwl~~ 263 (521)
T KOG0255|consen 188 PLTVGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITR--DWRWLFWIISIPSGLFLLL-WFLPPESPRWLLS 263 (521)
T ss_pred hhHHhHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHh--hHHHHHHHHHHHHHHHHHH-HHccCcChHHHHH
Confidence 999999999999999999999999 77778888888888888887 8999999999988887665 5666688875322
Q ss_pred CChhhhhh---hh-----------------h-ccc---cCCCCCCcchhHhhcCcchHHHHHHHHHHHHHHHHHHhhHHH
Q 012902 233 LRPAEKKL---IV-----------------S-SCA---SKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPT 288 (454)
Q Consensus 233 ~~~~~~~~---~~-----------------~-~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (454)
..+.++.. .+ . ..+ .....+...+.+.++.|++....+...+..+.+.....-++.
T Consensus 264 ~g~~~~a~~~l~~~a~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~y~gl~~ 343 (521)
T KOG0255|consen 264 KGRIDEAIKILKKIAKLNGRKLSVKELLRLELLLRPLKLLFTEPKISFLDLFRTPRLRYRTLYLLFIWFVFSLVYYGLSL 343 (521)
T ss_pred cCchHHHHHHHHHHHhhcCCCCCcHHHHHHHHHhhHhhhhccCCCCchhhhhcCHHHHHHHHHHHHHHHHHhHHHHhhhh
Confidence 21111100 00 0 000 001112234667777776555444444444333333333333
Q ss_pred HHHHHhCCcccchhhHhHHHHHHHHHHHHHHHHHhhhhhhcCccchhhHHHHHHHHHHHHHHHHHHhhccChh-HHHHHH
Q 012902 289 YYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSP-AMAVLC 367 (454)
Q Consensus 289 ~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 367 (454)
...+ +|.+ ........+.....+....+...|+.|||.. ......+...+............ +.....
T Consensus 344 ~~~~-lg~~---~~~~~~~~~~~~~p~~~~~~~~~~~~gR~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (521)
T KOG0255|consen 344 NVSG-LGGN---IYLNFTLSGLVELPAYFRNGLLLPEFGRRPP-------LFLSLFLAGIGLLLFGWLPDDLGGWLHWIL 412 (521)
T ss_pred hhhh-cCch---HHHHHHHHHHHHhhHHHHHHHHHHHhCcHHH-------HHHHHHHHHHHHHHHHHhhccchhHHHHHH
Confidence 3332 3433 3344455555777777788899999988832 22222222222222222222222 234444
Q ss_pred HHHHHhhhhhhcchhhhhhccccc-ccchhHHHHHHHHHHHHHHHHHHHHHHHhc
Q 012902 368 MACSQGTDAFSQSGLYSNHQDIAP-RYSGVLLGLSNTAGVLAGVFGTAATGYILQ 421 (454)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~ 421 (454)
..++.+..............+..| ..|..+.+..+....++.+++|.+.-....
T Consensus 413 ~~~~~~~~~~~~~~~~~~~~el~pt~~r~~~~~~~~~~~~~~~i~ap~~~~~~~~ 467 (521)
T KOG0255|consen 413 PLLGKFFIGSAFNLIFLYSAELIPTVVRNTAVGAISAAARLGSILAPLFPLLLRQ 467 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 444444444444444666666655 589999999999999999999998865544
No 100
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.94 E-value=2.2e-26 Score=193.53 Aligned_cols=387 Identities=16% Similarity=0.130 Sum_probs=259.9
Q ss_pred HHHHHHHHHHHHHHHHhhhchhhhhcchhhhhhcCCChhhHHHHHHHHHHHHHHhhhhhhhhhcc-ccchHHHHHHHHHH
Q 012902 43 KQIISLCVGNFEQIFIVFGQVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADT-VGGKAVLGFGVVWW 121 (454)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr-~Grr~~~~~~~~~~ 121 (454)
++...+.+.++..+.++++....+....++.+|.+++.++..++.+.|.....+...+.|++.|| +|.|..-++-+...
T Consensus 41 hr~m~lv~mc~lgfgsyfcyd~p~alq~~fk~d~ni~~akftLlYsvYSwPNvVlcffgGflidr~fgir~gtii~~~fv 120 (459)
T KOG4686|consen 41 HRFMALVFMCLLGFGSYFCYDAPGALQIDFKLDSNIEYAKFTLLYSVYSWPNVVLCFFGGFLIDRRFGIRLGTIILCIFV 120 (459)
T ss_pred hHHHHHHHHHHhcccceeecCCchhhhhhhhcccccceeeeeeeeeeccCCCEEEeeecceeehhhhhhhHHHHHHHHHH
Confidence 33444444444444577777777778888999999999999999999999999999999999996 78887766666666
Q ss_pred HHHHhhhh---hcccccHHHHHHHHHHHHhhcccchhhhhHHHhhhcCccchHHHHHHHHhhHHHHHHhHHhHHHHHhhc
Q 012902 122 SIATALTP---VAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHR 198 (454)
Q Consensus 122 ~~~~~l~~---~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~ig~~l~~~l~~~ 198 (454)
.+|.++++ ..+ .+|++..+|++.|+|.-...++.+.+..-|+..|+.+.++|+..+...+|..+--.+.+++.+.
T Consensus 121 ~~GqliFa~Ggi~~--aFw~M~~GRF~FGIGgESlAVaQN~yav~wFKGKELn~vfGlqlSvAR~GstvNf~lm~~ly~~ 198 (459)
T KOG4686|consen 121 FLGQLIFAAGGISH--AFWTMLAGRFLFGIGGESLAVAQNKYAVYWFKGKELNFVFGLQLSVARLGSTVNFLLMPFLYDT 198 (459)
T ss_pred HHHHHHHHhchHHH--HHHHHHhhheeeccCchhhhhhhcceeEEEecCccccchhhHHHHHHHhhceeeeeecHHHHHH
Confidence 67776664 566 8999999999999998888888999999999999999999999999999999888888888764
Q ss_pred cCc------chhH---HHHhHHHHHHHHHHHHhcCCCCCCCCCCChhhhhhhhhccccCCCCCCcchhHhhcCcchHHHH
Q 012902 199 FGW------PSVF---YSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALI 269 (454)
Q Consensus 199 ~gw------r~~f---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (454)
.+= +... ...+...+..-++.....--.. +..|+....++....+..+..+.++ ..|.+|.+.
T Consensus 199 ~~~~~~~~ghT~LG~~l~~~~~tc~~slical~lg~~D------~rAerilh~e~g~~Ge~pkLtdv~~--f~ppfw~~~ 270 (459)
T KOG4686|consen 199 MGRMFPGVGHTLLGLWLCFEVKTCKQSLICALSLGLSD------DRAERILHLEEGFLGEEPKLTDVNT--FYPPFWVLV 270 (459)
T ss_pred HHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHhhhhh------hHHHHHHhhhcCcccCCcccccccc--cCccHHHHH
Confidence 321 1111 1111111111111111100000 0001110011100001111111111 258899999
Q ss_pred HHHHHHHHHHHHHHhhHHHHHHHHhCCcccchhhHhHHHHHHHHHHHHHHHHHhhhhhhcCccchhhHHHHHHHHHHHHH
Q 012902 270 VSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPA 349 (454)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~ 349 (454)
+..++.+...+-+...-|.++++++|+|+..++.+.+.......+.+++.|.++||+|++- .++...+.....
T Consensus 271 iicv~yyva~fPFi~lg~~fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~-------~wv~~a~~~tl~ 343 (459)
T KOG4686|consen 271 IICVLYYVAWFPFITLGPMFFQKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKYGFNL-------WWVASACILTLL 343 (459)
T ss_pred HHHHHHHHHHHHHhhhhHHHHHHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhhccee-------hhHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999882 222222222111
Q ss_pred HHHHHhhccChhHHHHHHHHHHHhhhhhhcchhhhhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHhccC-Cchh-
Q 012902 350 FFLTQLSHVDSPAMAVLCMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHG-SWDD- 427 (454)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~-g~~~- 427 (454)
.-........+++ ....+++.......-+........+|.++.|++.|.++...++|-++.|.+.|.+.|.. +|.+
T Consensus 344 ~H~~l~Ft~lsPy--~~m~~lGLsysllAcslWP~va~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~i~d~~g~y~~l 421 (459)
T KOG4686|consen 344 GHSGLFFTFLSPY--TSMTFLGLSYSLLACSLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGFIADGDGSYDNL 421 (459)
T ss_pred HhhhHHhhhccHH--HHHHHHhhhHHHHHHHHhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhhheeecCCCchhhH
Confidence 1111111222232 23334444444443334444555566778999999999999999999999999999984 3553
Q ss_pred --HHHHHHHHHHHHHHHHHHhcc
Q 012902 428 --VFKVSVGLYLVGTAVWNLFST 448 (454)
Q Consensus 428 --~~~~~~~~~~~~~~~~~~~~~ 448 (454)
.|...+.+.+....+.+.+.+
T Consensus 422 e~ffl~~~~~aL~svgil~~~N~ 444 (459)
T KOG4686|consen 422 EAFFLIIGLMALTSVGILFYLNK 444 (459)
T ss_pred HHHHHHHHHHHHHHHHHHhheec
Confidence 333444444444444444443
No 101
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=99.93 E-value=4.1e-30 Score=249.49 Aligned_cols=389 Identities=16% Similarity=0.142 Sum_probs=254.8
Q ss_pred HHhhhchhhhhcchhhh--hhcCC---------ChhhHHHHHHHHHHHHHHhhhhhhhhhccccchHHHHHHHHHHHHHH
Q 012902 57 FIVFGQVNMSIAILPMS--AEFNW---------NPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIAT 125 (454)
Q Consensus 57 ~~~~~~~~~~~~~~~i~--~~~~~---------s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~ 125 (454)
..++|....+...+... .++.. ++.+.+++.+...++..+|++++|.++||+|||+.+..+.++..++.
T Consensus 11 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~~~~~i~~ 90 (451)
T PF00083_consen 11 LFGYDLGLIGSFASLLGFLQFFGWSSSESSCEKSSLLSSLLTSSFFIGAIVGALIFGFLADRYGRKPALIISALLMIIGS 90 (451)
T ss_pred HHHHHHHHHhhHHhhhhhhhccccccccccccchHHHHHHHHHHHHhhhccccccccccccccccccccccccccccccc
Confidence 56777776665554433 22221 22357899999999999999999999999999999999999999999
Q ss_pred hhhhhcccc-cHHHHHHHHHHHHhhcccchhhhhHHHhhhcCccchHHHHHHHHhhHHHHHHhHHhHHHHHhhc---cCc
Q 012902 126 ALTPVAAKL-GLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHR---FGW 201 (454)
Q Consensus 126 ~l~~~~~~~-~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~ig~~l~~~l~~~---~gw 201 (454)
++.++++.. |++.+.++|+++|++.|...+....++.|..|+++|++..++.+.+..+|..++..++..+.+. .+|
T Consensus 91 ~~~~~~~~~~~~~~~~~~R~~~G~~~g~~~~~~~~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~W 170 (451)
T PF00083_consen 91 ILIAFAPSYNNFWMLLIGRFLIGFGIGGAYVVSPIYISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIVSYYSDNWGW 170 (451)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 999999743 6799999999999999999999999999999999999999999999999999998877655433 359
Q ss_pred chhHHHHhHHHHHHHHHHHHhcCCCCCCCCCCChhhhhh---h--------hhc-cccC-----CCCCCcchhHhhcCcc
Q 012902 202 PSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKL---I--------VSS-CASK-----EPVKTIPWGLILSKPP 264 (454)
Q Consensus 202 r~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~--------~~~-~~~~-----~~~~~~~~~~~~~~~~ 264 (454)
|..+.+.++++++..+ ...+.||+|+.-..+++.++.. . +++ ++.. .++.+..+++++++++
T Consensus 171 r~~~~~~~~~~l~~~~-~~~~~pESP~wL~~~~~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 249 (451)
T PF00083_consen 171 RILLIFGAIPSLLVLL-LRFFLPESPRWLLSKGRDEEAEKVLRKLRGKEIEDEEIEEIKAEKKESQESKASWRDLFRNKK 249 (451)
T ss_pred cccccccccccccccc-cccccccccceecccccccccccccccccccccccccccccccccccccccceeeeecccccc
Confidence 9999998888877644 4467899987532221111100 0 000 0000 0001134566776644
Q ss_pred ----hHHHHHHHHHH-HHHHHHHHhhHHHHHHHHhCCcccchhhHhHHHHHHHHHHHHHHHHHhhhhhhcCccchhhHHH
Q 012902 265 ----VWALIVSHFCH-NWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKI 339 (454)
Q Consensus 265 ----~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~ 339 (454)
.........+. ..+......+.|.++++ .+.+.. -.......+...++.+...++.||+|||+....+. .
T Consensus 250 ~~~~~~~~~~l~~~~~~~g~~~~~~~~~~i~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~GRr~~~i~~~--~ 324 (451)
T PF00083_consen 250 YRKRLLIALLLQFFQQFSGINFIFYYSPSIFEN-AGISNS--FLATLILGLVNFLGTLLAIFLIDRFGRRKLLIIGL--L 324 (451)
T ss_pred ccccccccccccccccccccccccccccccccc-cccccc--ccccccccccccccccccccccccccccccccccc--c
Confidence 22222222222 22333444555656555 566665 23333445666777778889999999997655432 1
Q ss_pred HHHHHHHHHHHHHHHhhccC----hhHHHHHHHHHHHhhhhhhcchhhhhhccccc-ccchhHHHHHHHHHHHHHHHHHH
Q 012902 340 MQSIGFLGPAFFLTQLSHVD----SPAMAVLCMACSQGTDAFSQSGLYSNHQDIAP-RYSGVLLGLSNTAGVLAGVFGTA 414 (454)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~~~~ 414 (454)
...++....+ ......... .........+...+......+....+..|..| +.|+++.|+....+++++.++|.
T Consensus 325 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~g~~~~~~~~~~ElfPt~~R~~~~~~~~~~~~i~~~i~~~ 403 (451)
T PF00083_consen 325 LMAICSLILG-IIFFLGVSSSSWWSILSIVFLALFFAFFSLGWGPLPWIYTAELFPTKVRSTGIGLSYAVGRIGGFIIPF 403 (451)
T ss_pred cccccccccc-cccccccccccccccccceeeeecccccccccccccccccccccccccccccccccccccccccccccc
Confidence 1111111111 001111111 11222222222233333334455455455544 78999999999999999999999
Q ss_pred HHHHHhccCCchhHHHHHHHHHHHHHHHHHHhccCCcc
Q 012902 415 ATGYILQHGSWDDVFKVSVGLYLVGTAVWNLFSTGEKV 452 (454)
Q Consensus 415 ~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 452 (454)
+...+.+..+....+.+.++++++..++..++.+|+|.
T Consensus 404 ~~~~~~~~~~~~~~~~i~~~~~~i~~i~~~~~lpET~g 441 (451)
T PF00083_consen 404 LFPYLFNNLGGWGVFLIFAGVCLIAIIFVYFFLPETKG 441 (451)
T ss_pred ccccccccccccccchhhHHHHHHHHhheeEEEeeCCC
Confidence 99999888775566777777777676666666666554
No 102
>PRK09669 putative symporter YagG; Provisional
Probab=99.93 E-value=9e-23 Score=197.15 Aligned_cols=335 Identities=14% Similarity=0.063 Sum_probs=221.0
Q ss_pred hcchhhhhhcCCChhhHHHHHHHHHHHHHHhhhhhhhhhcc----ccchHH-HHHHHHHHHHHHhhhhhcccc----cHH
Q 012902 67 IAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADT----VGGKAV-LGFGVVWWSIATALTPVAAKL----GLP 137 (454)
Q Consensus 67 ~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr----~Grr~~-~~~~~~~~~~~~~l~~~~~~~----~~~ 137 (454)
...+.+.+++|+|..++|.+.++..+..++..|+.|.++|| +||||. ++.+.+..+++..+....|.. ..+
T Consensus 31 ~l~~~~t~~~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~l~f~~p~~~~~~~~~ 110 (444)
T PRK09669 31 FLAYFYTDVFGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCLLTFYTPDFGATGKII 110 (444)
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHHHHHHHhCCCCCcchHHH
Confidence 34556788899999999999999999999999999999999 787555 667777777777665555411 245
Q ss_pred HHHHHHHHHHhhcccchhhhhHHHhhhc-CccchHHHHHHHHhhHHHHHHhHHhHHHHHhh-------ccCcchhHHHHh
Q 012902 138 FLLVVRVFMGIGEGVAMPAMNNILSKWV-PVAERSRSLALVYSGMYLGSVTGLAFSPFLIH-------RFGWPSVFYSFG 209 (454)
Q Consensus 138 ~l~~~r~l~G~~~g~~~~~~~~~i~~~~-~~~~rg~~~~~~~~~~~~g~~ig~~l~~~l~~-------~~gwr~~f~~~~ 209 (454)
.+++..++.+.+......+..++.+|+. ++++|++..++......+|..+++.+...+.. ..+|+..+.+.+
T Consensus 111 ~~~~~~~l~~~~~t~~~ip~~al~~~~t~~~~eR~~l~~~r~~~~~~G~~i~~~~~~pl~~~~~~~~~~~g~~~~~~i~~ 190 (444)
T PRK09669 111 YACVTYILLSLVYTAINVPYCAMPGAITNDPRERHSLQSWRFALSFIGGLIVSVIALPLVDILGKGDEQKGYFYAMMVMG 190 (444)
T ss_pred HHHHHHHHHHHHHHhhcchHHHhHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHH
Confidence 5666677777776677777889999998 45789999899888888888887765544432 347888888888
Q ss_pred HHHHHHHHHHHHhcCCCCCCCCCCChhhhhhhhhccccCCCCCCcchhHhhcCcchHHHHHHHHHHHHHHHHHHhhHHHH
Q 012902 210 SLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTY 289 (454)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (454)
+++++..++.++..+|+++++++. ++....+++..+|||.++.+....++............+.|
T Consensus 191 ii~~v~~~~~~~~~~e~~~~~~~~---------------~~~~~~~~~~~~~n~~~~~l~~~~~~~~~~~~~~~~~~~y~ 255 (444)
T PRK09669 191 LLGVVLFFCCFFMTKERYTPEVDN---------------SSSVWKDLKLLLGNSQWRIMFIFNVVLLTAVVTRGGATLYY 255 (444)
T ss_pred HHHHHHHHHHhCCeEEecCCCCcC---------------CCCHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHhhhhhee
Confidence 887777666665555543221100 01113456778899999988877777666665555544444
Q ss_pred HHHHhCCcccchhhHhHHHHHHHHHHHHHHHHHhhhhhhcCccchhhHHHHHHHHHHH-HHHHHHHhhccChhH-HHHHH
Q 012902 290 YNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLG-PAFFLTQLSHVDSPA-MAVLC 367 (454)
Q Consensus 290 l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~ 367 (454)
.+...+ +++..+.......+..+++.++.+++.||+|+|+... ....... ........ ..++.+ ..+..
T Consensus 256 ~~~~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gk~~~~~-------~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 326 (444)
T PRK09669 256 VNYVLL-RPDLATLFLVTGMIAGLFGALLSERLLGKFDRVRAFK-------WTIVAFVILSALIFFI-PPSNVWLIFALN 326 (444)
T ss_pred eeeecC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHH-------HHHHHHHHHHHHHHHh-CcchHHHHHHHH
Confidence 444333 2333444555556777888889999999999884322 1111111 11111122 223333 33333
Q ss_pred HHHHHhhhhhhcchhhhhhcccc--------cccchhHHHHHHHHHHHHHHHHHHHHHHHhccCCch
Q 012902 368 MACSQGTDAFSQSGLYSNHQDIA--------PRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWD 426 (454)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~ 426 (454)
.+.+.+..... +.......|.. .+..|...|..+....+|..+++.+.|.+.+..||+
T Consensus 327 ~i~g~~~~~~~-~~~~am~ad~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~i~g~ll~~~Gy~ 392 (444)
T PRK09669 327 ILFNFIQNLTT-PLQWSMFSDVVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGAVVGWILAWVDYV 392 (444)
T ss_pred HHHHHHHHHHH-HHHHHHHHhhhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 33444444333 44444443332 234577889999999999999999999999987773
No 103
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.92 E-value=9.5e-22 Score=187.85 Aligned_cols=361 Identities=16% Similarity=0.107 Sum_probs=266.1
Q ss_pred hhHHHHHHHHHHHHHHhhhhhhhhhccccchHHHH-HHHHHHHHHHhhhhhcccccHHHHHHHHHHHHhhcccchhhhhH
Q 012902 81 ATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLG-FGVVWWSIATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNN 159 (454)
Q Consensus 81 ~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~-~~~~~~~~~~~l~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~ 159 (454)
+..++..++..+..++..|+.|.++|+-|+||.++ ...++..+++.++.+.+..+++...+.-++.-++.+.......+
T Consensus 70 s~~~~~~sis~l~~all~P~lGa~aD~~~~Rk~~l~~~~~~~~~~~~~l~~v~~~~~~~~~~l~iia~v~~~~~~vfyna 149 (477)
T PF11700_consen 70 SLWLYANSISGLLQALLAPFLGAIADYGGRRKRFLLIFTLLGVLATALLWFVSPGQWWLALVLFIIANVGYEASNVFYNA 149 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44578888999999999999999999999777654 44455566666666653324555555666666777778888999
Q ss_pred HHhhhcCccch--------------------------HHHHHHHHhhHHHHHHhHHhHHHHHhhc--------cCcchhH
Q 012902 160 ILSKWVPVAER--------------------------SRSLALVYSGMYLGSVTGLAFSPFLIHR--------FGWPSVF 205 (454)
Q Consensus 160 ~i~~~~~~~~r--------------------------g~~~~~~~~~~~~g~~ig~~l~~~l~~~--------~gwr~~f 205 (454)
++.|..+++++ ++..+.-.....+|.++.-.+.-.+... .+-|..+
T Consensus 150 ~LP~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l~~~~~~~~~~~~~~~~r~~~ 229 (477)
T PF11700_consen 150 YLPDLARPEPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISLLLVISPGSTASNTWAIRVAF 229 (477)
T ss_pred HhHhhcCCChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccchhhhHHH
Confidence 99999999888 8999998888888888887766555321 2358888
Q ss_pred HHHhHHHHHHHHHHHHhcCCCCCCCCCCChhhh-hhhhhccccCCCCCCcchhHhhcCcchHHHHHHHHHHHHHHHHHHh
Q 012902 206 YSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEK-KLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLT 284 (454)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (454)
.+.++.-++..+..++..||+|+++........ ..... +....+|++.|+|+....++.+++..-+...+..
T Consensus 230 ~~~a~ww~vfsiP~~~~~~~~~~~~~~~~~~~~~~~g~~-------~l~~t~k~~~~~~~~~~fLia~~l~~dg~~ti~~ 302 (477)
T PF11700_consen 230 LIVALWWLVFSIPLFLWLPDRPGPRPLPSGSSYLRFGFK-------RLWRTFKEIRKLRQLFLFLIAYFLYSDGVNTIIS 302 (477)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCCCCCCCcchhHHHHHHH-------HHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHH
Confidence 888888888888888888887763221111110 00000 0034566777889999999999999999999999
Q ss_pred hHHHHHHHHhCCcccchhhHhHHHHHHHHHHHHHHHHHhhhhhhc--CccchhhHHHHHHHHHHHHHHHHH-----Hhhc
Q 012902 285 WMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSK--GLSVTTVRKIMQSIGFLGPAFFLT-----QLSH 357 (454)
Q Consensus 285 ~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~--~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~ 357 (454)
....|.++++|++..+...+.....+.+++|+++.|++.||+|.| +...... ....+.....+. ....
T Consensus 303 ~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l-----~~~~~i~~~g~~G~~~~~~g~ 377 (477)
T PF11700_consen 303 FAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLISL-----ILWIIIPLYGLFGFWPSFFGL 377 (477)
T ss_pred HHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHH-----HHHHHHHHHHHHHhhhcccCc
Confidence 999999999999999999999999999999999999999999998 3322111 111011111111 1113
Q ss_pred cChhHHHHHHHHHHHhhhhhhcchhhhhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHhccC-CchhHHHHHHHHH
Q 012902 358 VDSPAMAVLCMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHG-SWDDVFKVSVGLY 436 (454)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~-g~~~~~~~~~~~~ 436 (454)
.+.+..++...+.+.+.+......-..+.+..||++.+...|++.......+.+||.+.|.+.|.. +.+..+....++.
T Consensus 378 ~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i~~~tg~~r~g~~~l~~lf 457 (477)
T PF11700_consen 378 KSPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFGLITDATGSQRYGFLFLLVLF 457 (477)
T ss_pred ccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHH
Confidence 344444555556666666666666666677788889999999999999999999999999999984 5899999999999
Q ss_pred HHHHHHHHHhccCCccc
Q 012902 437 LVGTAVWNLFSTGEKVV 453 (454)
Q Consensus 437 ~~~~~~~~~~~~~~~~~ 453 (454)
+++.++......++.++
T Consensus 458 ~~gl~ll~~v~~~~g~~ 474 (477)
T PF11700_consen 458 LIGLILLFFVDVEKGRE 474 (477)
T ss_pred HHHHHHHhhccchhhhh
Confidence 99988887766555443
No 104
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.92 E-value=6.6e-23 Score=188.34 Aligned_cols=374 Identities=11% Similarity=0.043 Sum_probs=238.1
Q ss_pred Hhhhchhhhhcchhhh-hhcCCChhhHHHHHHHHHHHHHHhhhhhhhhhccccchHHHHHHHHHH---HHHHhhhhhccc
Q 012902 58 IVFGQVNMSIAILPMS-AEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWW---SIATALTPVAAK 133 (454)
Q Consensus 58 ~~~~~~~~~~~~~~i~-~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~---~~~~~l~~~~~~ 133 (454)
..+.++..-+..|.+. ++.|+|.+++|.+.++..+...+.+|+.|.++||.|.||-++....+. ........+.|-
T Consensus 19 ~Ff~~gi~~pF~~iWL~~~~GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dklg~kK~Ll~~i~~l~~l~~pff~~v~~pl 98 (412)
T PF01306_consen 19 YFFIWGIFLPFFPIWLTQVAGLSGTEIGIIFSAGSLFALLAQPVYGFISDKLGLKKHLLWFIAILLLLFGPFFIYVFGPL 98 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHTHHHHHHHHHHCTTCSHHHHHHHHHHHTCHHHHHHTHHHH
T ss_pred HHHHHHHHHHHHHHHHccccCCCHHHHHHHHHHHHHHHHHHHHhHHHhcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445566666666654 458999999999999999999999999999999999666554433222 122222233320
Q ss_pred --ccHH-HHHHHHHHHHhhcccchhhhhHHHhhhcCccchHHHHHHHHhhHHHHHHhHHhHHHHHhhccCcchhHHHHhH
Q 012902 134 --LGLP-FLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGS 210 (454)
Q Consensus 134 --~~~~-~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~ig~~l~~~l~~~~gwr~~f~~~~~ 210 (454)
.|.+ ..+++-+..|+......|...+++.++. ++.+.-.|-.....++|.+++..++|.+.+ .+-+..||+...
T Consensus 99 l~~n~~lg~iig~i~l~~~f~~~~~~~Ea~~er~s--r~~~feYG~~R~wGSig~ai~s~~~G~L~~-i~p~~~fwi~s~ 175 (412)
T PF01306_consen 99 LQSNFWLGAIIGGIYLGLVFNAGVPLSEAYAERVS--RRNGFEYGRARMWGSIGFAIASLLAGILFN-INPNIIFWIASA 175 (412)
T ss_dssp HHTT-HHHHHHTTTTTTTTTTTHHHHHHHHHHHHH--HHHSS-HHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHH--HHhcCCcchHHHHhhHHHHHHHHHhheeee-eCccHHHHHHHH
Confidence 0322 2223333344445555566666666654 455666888888999999999999999987 455778887776
Q ss_pred HHHHHHHHHHHhcCCCCCCCCCCChhhhhhhhhccccCCCCCCcchhHhhcCcchHHHHHHHHHHHHHHHHHHhhHHHHH
Q 012902 211 LGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYY 290 (454)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 290 (454)
.+++..++.....|+.+++.+..+.++. ++++.+.++..+++|+|++|.+.+........+..+...+|.|.
T Consensus 176 ~~~il~lll~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~l~k~~~fw~~~l~v~g~~~~Y~vfdqqf~~y~ 247 (412)
T PF01306_consen 176 AAIILLLLLLLLKPDVPPQAEVADALGA--------KKDKVSLKDVLSLFKMRNFWFFVLFVIGVAAIYDVFDQQFPIYF 247 (412)
T ss_dssp HHHHHHHHHHSS---SSSSS-SSTTSSS--------------HHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCcCchhhhhhccccc--------CCCCCcHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6666655555554444333221111100 01111123456788999999988888887788888888888888
Q ss_pred HHHh---CCcccchhhHhHHHHHHHHHHHHHHHHHhhhhhhcCccchhhHHHHHHHHHHHHHHHHHHhhccChhHHHHHH
Q 012902 291 NQVL---HFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLC 367 (454)
Q Consensus 291 ~~~~---g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 367 (454)
++.+ +.+....|.+.+...+..++.-.+.+++.+|+|.|+ .++ ++.....+=.......++++.+...
T Consensus 248 ~~~f~~~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~rig~k~--------~Ll-lag~i~~iRi~~~~~~~~~~~i~~~ 318 (412)
T PF01306_consen 248 ASFFQSAGQGNQMYGYLWSVQVFLEALMMFFSPWLINRIGAKN--------LLL-LAGVIMAIRIIGSGFATNPWVISLI 318 (412)
T ss_dssp HHTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHH--------HHH-HHHHHHHHHHHHHHT--SHHHHHHH
T ss_pred HHHhcccccChhHHhHHHHHHHHHHHHHHHHHHHHHHhcChHh--------HHH-HHHHHHHHHHHHHhhhcchHHHHHH
Confidence 8643 234456788888888999999999999999999994 222 2222233323333334444444444
Q ss_pred HHH-HHhhhhhhcchhhhhhcccccccchhHHHHH-HHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHHHH
Q 012902 368 MAC-SQGTDAFSQSGLYSNHQDIAPRYSGVLLGLS-NTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWNL 445 (454)
Q Consensus 368 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 445 (454)
=.+ +.-.........-...+..++|..++...+. +...+++..+.+.+.|.++|+.|++..|++.+.+.+...++..+
T Consensus 319 klLH~~e~~l~lva~fkYI~~~fd~rlsAt~y~v~~~~~~~~~~~i~s~~~G~lyd~~G~~~tylimg~iv~~~~li~~f 398 (412)
T PF01306_consen 319 KLLHALEFPLLLVAAFKYITAHFDKRLSATLYLVGFQFAKQIGIIILSPLAGYLYDRIGFQHTYLIMGLIVLPFTLISAF 398 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHS-GGGHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCHhHHHHHHHHHHHHHHHHHHHHHhhhHHhhHhhcCcHHHHHHHHHHHHHHHHHhee
Confidence 344 4444444444444555667777888888885 68889999999999999999999999998888887776666655
Q ss_pred hccCCc
Q 012902 446 FSTGEK 451 (454)
Q Consensus 446 ~~~~~~ 451 (454)
..++++
T Consensus 399 ~l~~~~ 404 (412)
T PF01306_consen 399 TLKKDK 404 (412)
T ss_dssp HS--SS
T ss_pred eecCCC
Confidence 544443
No 105
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.92 E-value=2.2e-23 Score=201.25 Aligned_cols=379 Identities=9% Similarity=-0.028 Sum_probs=243.9
Q ss_pred HHHHHHHHHHHHHHHhhhchhhhhcchhhhhhcCCChhhHHHHHHHHHHHHHHhhhhhhhhhcccc-----chHHHHHHH
Q 012902 44 QIISLCVGNFEQIFIVFGQVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVG-----GKAVLGFGV 118 (454)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G-----rr~~~~~~~ 118 (454)
..+.++...++ ..++.........|.+.+++|+|.++++...+...+...+-.+ +|+++||++ ||+.++++.
T Consensus 26 ~~~~~~~~~y~--~qGl~~l~~~~~~~~l~~~lg~s~~~i~~~~sl~~lpw~~K~l-~g~l~D~~~i~G~rRr~~l~~~~ 102 (468)
T TIGR00788 26 VVLAIGLQVLF--VKGIAGLMRLPLSPMLTDDLGLDGARYQRLVGLSSLGWALKPF-AGVMSDTFPLFGYTKRWYLVLSG 102 (468)
T ss_pred hHHHHHHHHHH--HhhHHHHhhhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHhcCCCCccchHHHHHHH
Confidence 33444444444 5666633333445557778999999999999999999999554 999999998 788788887
Q ss_pred HHH-HHHHhhhhhcccccHHHH-HHHHHHHHhhcccchhhhhHHHhhhcCccchHHH---HHHHHhhHHHHHHhHHhHHH
Q 012902 119 VWW-SIATALTPVAAKLGLPFL-LVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRS---LALVYSGMYLGSVTGLAFSP 193 (454)
Q Consensus 119 ~~~-~~~~~l~~~~~~~~~~~l-~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~---~~~~~~~~~~g~~ig~~l~~ 193 (454)
++. .++....+..+ +.... .+..++.+++.+...++..++..|..+ |+++.. .+......++|..+|+.++|
T Consensus 103 ~l~~~~~~~~l~~~~--~~~~~~~~~~~l~~~~~a~~dv~~da~~~e~~~-~~~~~~~~~~s~~~~~~~~G~~vg~~l~G 179 (468)
T TIGR00788 103 LLGSAILYGLLPGKV--SSAKVAAAFIFLAALAKALYDVLVDSLYSERIR-ESPSAGPSLVSWMWGASATGGLISSLLGG 179 (468)
T ss_pred HHHHHHHHHhccccc--chHHHHHHHHHHHHHHHHHHHHhHHHHHhhhhh-cCCCcCCCeeeHHHHHHHHHHHHHHHHHH
Confidence 776 34444444445 54444 448999999999999999999999998 555443 33444445689999999999
Q ss_pred HHhhccCcchhHHHHhHHHHHHHHHHHHhcCCCCC-CCCCCChhhh---hhhhhccccCCCCCCcchhHhhcCcchHHHH
Q 012902 194 FLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHSSPA-EDPQLRPAEK---KLIVSSCASKEPVKTIPWGLILSKPPVWALI 269 (454)
Q Consensus 194 ~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (454)
.+.+.++||..|++.+.+.++..+ ...+.+|++. ..++..+++. ........+.........+..+++|.++...
T Consensus 180 ~l~~~~~~~~~f~~~a~l~ll~~~-~~~~~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~i~~~l 258 (468)
T TIGR00788 180 PLLDKTLTRILFLITAALLLLQLF-VSNLSKERRAFVRPRIGTYLEMNMALLTLGVLANVKVQILGLRGAIQLLEIAKPL 258 (468)
T ss_pred HHHHhcCcchHHHHHHHHHHHHHH-HHHhcccccccccccccccchhhhhhhhhhHHHHHHHHHHHHHHHHhcHHHHHHH
Confidence 999999999999999888887743 3445566531 1111100000 0000000000000012344467788888765
Q ss_pred HHHHH-HHHHHHHHHhhHHHHHHHHhCCcccchhhHhHHHHHHHHHHHHHHHHHhhhhhhcCccchhhHHHHHHHHHHHH
Q 012902 270 VSHFC-HNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGP 348 (454)
Q Consensus 270 ~~~~~-~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~ 348 (454)
+..++ ..........++ .+.++..|+++.+.|......+++.+++....+++.+|++.|+. +.++.+..
T Consensus 259 ~fifl~~~~~~~~~~~~f-~~~~~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r~~---------l~~~~~l~ 328 (468)
T TIGR00788 259 IFIFLSYANLPGASGSVF-CATTQCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTFPYRLL---------FGVTTLLY 328 (468)
T ss_pred HHHHHHHhhcCCCCceeE-EEEcccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhCCHHHH---------HHHHHHHH
Confidence 55555 222111111110 12234589999999999999999999999999999888887732 22222222
Q ss_pred HHHHHHhh-----------ccChhHHHHHHHHHHHhhhhhhcchhhhhhcccccccchhHHHHHHHHHHHHHHHHHHHHH
Q 012902 349 AFFLTQLS-----------HVDSPAMAVLCMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATG 417 (454)
Q Consensus 349 ~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g 417 (454)
........ ..+.........+...+.+....+......+.+|++.+|+..++.+.+.++|..+++.++|
T Consensus 329 ~~~~~~~~~l~~~~~~~~gi~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~~gg 408 (468)
T TIGR00788 329 TLSSLFDLILVKRWNLAFGISDEVFVLGDSIIAEVLAQLKFMPFLVLLARLCPSGCESSVFALLASILHLGSSVSGFLGV 408 (468)
T ss_pred HHHHhCceeeeeccccccCCCCeeeeeehhHHHHHHHHHHHccHHHHHHHhCCCCceehHHHHHHHHHHHHHHHHHHHHH
Confidence 22211100 0111122333344455555555666666667788889999999999999999999999999
Q ss_pred HHhccCC-----chhHHHHHHHHHHHH
Q 012902 418 YILQHGS-----WDDVFKVSVGLYLVG 439 (454)
Q Consensus 418 ~l~~~~g-----~~~~~~~~~~~~~~~ 439 (454)
.+.++.| ++..+....+..+..
T Consensus 409 ~l~~~~g~~~~~~~~~~~~i~i~~~~~ 435 (468)
T TIGR00788 409 LLMETIGITCDNSNNLWLLILGHSLAP 435 (468)
T ss_pred HHHHHcCCCcccccchHHHHHHHHHHH
Confidence 9999877 766665544444433
No 106
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.92 E-value=1.9e-22 Score=184.03 Aligned_cols=277 Identities=11% Similarity=0.055 Sum_probs=196.1
Q ss_pred cHHHHHHHHHHHHhhcccchhhhhHHHhhhcCccchHHHHHHHHhhHHHHHHhHHhHHHHHhhc----------------
Q 012902 135 GLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHR---------------- 198 (454)
Q Consensus 135 ~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~ig~~l~~~l~~~---------------- 198 (454)
+++.++++-++.|.|.+...+..++++++..|+|++++.+++.+..+++|..+||.+++.+...
T Consensus 9 ~~~~~l~~~f~~g~G~~~lq~~~n~~v~~~~~~~~~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~~~~~~~~~~ 88 (310)
T TIGR01272 9 YYVLFLGALFVLASGLTILQVAANPYVSILGPIETAASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSMQVATANAEA 88 (310)
T ss_pred HHHHHHHHHHHHHhhHHHHHhhHHHHHHHHCCcchHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhhhhhhhhHHH
Confidence 7999999999999999999999999999999999999999999999999999999999987732
Q ss_pred cCcchhHHHHhHHHHHHHHHHHHh-cCCCCCCCCCCChhhhhhhhhccccCCCCCCcchhHhhcCcchHHHHHHHHHHHH
Q 012902 199 FGWPSVFYSFGSLGTVWFTVWLSK-AHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNW 277 (454)
Q Consensus 199 ~gwr~~f~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (454)
..|+++|++.+.+.++..++..+. .||.+++++ ++..+ ++ ....+..+|+|.++...+..+++..
T Consensus 89 ~~~~~~yl~ia~~~~~~~i~~~~~~~p~~~~~~~---~~~~~--------~~---~~~~~~~~~~~~~~l~~~~~f~yvg 154 (310)
T TIGR01272 89 AKVHTPYLLLAGALAVLAIIFAFLPLPELQEADV---ARVSS--------GD---TTQKTSAFQFTHLVLGALGIFVYVG 154 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHccCCCCCcccc---ccccc--------cc---ccchhhHHhhHHHHHHHHHHHHHHH
Confidence 479999997776655554443332 233211111 00000 00 0112346778888888888888888
Q ss_pred HHHHHHhhHHHHHHHH--hCCcccchhhHhHHHHHHHHHHHHHHHHHhhhhhhcCccchhhHHHHHHHHHHHHHHHHHHh
Q 012902 278 GTFILLTWMPTYYNQV--LHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQL 355 (454)
Q Consensus 278 ~~~~~~~~~~~~l~~~--~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (454)
...+...|++.|+++. +|+++.+++...+.+..+.++|+++.+++.||+++||... ++...........
T Consensus 155 ~e~~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~---------~~~~l~~~~~~l~ 225 (310)
T TIGR01272 155 AEVSAGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRYLA---------FNAFLAVLLSIGA 225 (310)
T ss_pred HHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHH---------HHHHHHHHHHHHH
Confidence 8999999999999864 6899999999999999999999999999999999885321 1111111111111
Q ss_pred hccChhHHHHHHHHHHHhhhhhhcchhhhhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHH
Q 012902 356 SHVDSPAMAVLCMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGL 435 (454)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~ 435 (454)
...+.........+.+.+.... .|.......+..|++.+++.++. ....+|+++.|.+.|.+.|..|.+.++++...+
T Consensus 226 ~~~~~~~~~~~~~l~g~~~s~i-~P~~~s~a~~~~~~~~~~asai~-~~~~~Gg~i~P~l~G~lad~~g~~~a~~v~~~~ 303 (310)
T TIGR01272 226 ALTHGYVAMWFVLALGLFNSIM-FPTIFSLALNALGRHTSQGSGIL-CLAIVGGAIVPLLQGSLADCLGIQLAFALPVPC 303 (310)
T ss_pred HHcCCHHHHHHHHHHHHHHHHH-HHHHHHHHHhhhhhhhhhhHHHH-HHHHhcchHHHHHHHHHHHhccchHHHHHHHHH
Confidence 1112222233344444444444 44444444343445566777774 678899999999999999998888888754444
Q ss_pred H
Q 012902 436 Y 436 (454)
Q Consensus 436 ~ 436 (454)
.
T Consensus 304 ~ 304 (310)
T TIGR01272 304 Y 304 (310)
T ss_pred H
Confidence 3
No 107
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.91 E-value=8.9e-21 Score=180.72 Aligned_cols=379 Identities=15% Similarity=0.166 Sum_probs=222.4
Q ss_pred Hhhhchhhhhcchh-hhhhcCCChhhHHHHHHHHHHHHHHhhhhhhhhhccc-cchHHHHHHHHHHHHHHhhhhhccccc
Q 012902 58 IVFGQVNMSIAILP-MSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTV-GGKAVLGFGVVWWSIATALTPVAAKLG 135 (454)
Q Consensus 58 ~~~~~~~~~~~~~~-i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-Grr~~~~~~~~~~~~~~~l~~~~~~~~ 135 (454)
..+..+.....+|. +.+++|.++.+.+.+.+.+.....++.+++|+++||+ ||||++..+.++.+++.++++..+. +
T Consensus 21 e~fs~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il~~lg~lll~~~~~-~ 99 (493)
T PRK15462 21 EYFSFYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLMAIGHVVLGASEI-H 99 (493)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHhhc-c
Confidence 44444445555555 5677999999999999999999999999999999999 9999999999999999887765431 2
Q ss_pred HHHHHHHHHHHHhhcccchhhhhHHHhhhcCcc--chHHHHHHHHhhHHHHHHhHHhHHHHHhhccCcchhHHHHhHHHH
Q 012902 136 LPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVA--ERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGT 213 (454)
Q Consensus 136 ~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~--~rg~~~~~~~~~~~~g~~ig~~l~~~l~~~~gwr~~f~~~~~~~~ 213 (454)
...+.++..+.++|.|...+...++++|.+|++ +|..+.++.....++|..++|.+.+++.+++|||+.|.+.++..+
T Consensus 100 ~~~~~l~l~li~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~~~Gw~~~F~iaaigm~ 179 (493)
T PRK15462 100 PSFLYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQEEYSWAMGFGLAAVGMI 179 (493)
T ss_pred hhHHHHHHHHHHHhcccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHHHhhhChHHHHHHHHHHHH
Confidence 233444555566677777788889999999875 699999999999999999999999999999999999998765444
Q ss_pred HHHHHHHHhcCCCCCC-----CCCCChhhhhh---------------hh-hccccCCCC-----------------CCcc
Q 012902 214 VWFTVWLSKAHSSPAE-----DPQLRPAEKKL---------------IV-SSCASKEPV-----------------KTIP 255 (454)
Q Consensus 214 ~~~~~~~~~~~~~~~~-----~~~~~~~~~~~---------------~~-~~~~~~~~~-----------------~~~~ 255 (454)
+..+. +...++..++ +++.++++... .. ....++... ...+
T Consensus 180 l~li~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (493)
T PRK15462 180 AGLVI-FLCGNRHFTHTRGVNKKVLRATNFLLPNWGWLLVLLVATPALITVLFWKEWSVYALIVATIIGLGVLAKIYRKA 258 (493)
T ss_pred HHHHH-HHHhhhhhccCCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 43333 2222211101 11111110000 00 000000000 0000
Q ss_pred hhHhhcCc--chHHHHHHHHHHHHHHHHHHhhHHHHHHHHh-----CCcccchhhHhHHHHHHHHHHHHHHHHHhhhhhh
Q 012902 256 WGLILSKP--PVWALIVSHFCHNWGTFILLTWMPTYYNQVL-----HFNLTESGLFCVLPWLTMAFSANLGGWIADTLVS 328 (454)
Q Consensus 256 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-----g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~ 328 (454)
..+.-|+| .+..+.+...+.+..+....+-+..|.++.- |++ ....+..+...+..++.+++.+++-.|..+
T Consensus 259 ~~~~er~r~~~~~~l~~~~~~Fw~~~~Q~~~sl~lfa~~~vd~~~~g~~-ip~~~~qslNp~~ii~l~P~~a~lw~~l~~ 337 (493)
T PRK15462 259 ENQKQRKELGLIVTLTFFSMLFWAFAQQGGSSISLYIDRFVNRDMFGYT-VPTAMFQSINAFAVMLCGVFLAWVVKESVA 337 (493)
T ss_pred CCHHHHhhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhccchhccee-eCHHHHHhHhHHHHHHHHHHHHHHHHHHhc
Confidence 00001112 1223333333344444444455556665532 322 235667778888788888887777677744
Q ss_pred cCccchhhHHHHHHHHHHHHHHHHHHh-----hcc--ChhHHHHHHHHHHHhhhhhhcchhhhhhccccc-ccchhHHHH
Q 012902 329 KGLSVTTVRKIMQSIGFLGPAFFLTQL-----SHV--DSPAMAVLCMACSQGTDAFSQSGLYSNHQDIAP-RYSGVLLGL 400 (454)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~ 400 (454)
|+.......+....+.+.+.+...... ... .+.++.+...++...+.....|.-.+...+..| +.+|..+|.
T Consensus 338 ~~~~~s~~~Kfa~g~~~~g~~f~~l~~~~~~~~~~~~~s~~wl~~~~~~~t~gEl~~sPvgls~~~~laP~~~~g~~mg~ 417 (493)
T PRK15462 338 GNRTVRIWGKFALGLGLMSAGFCILTLSARWSAMYGHSSLPLMVLGLAVMGFAELFIDPVAMSQITRIEIPGVTGVLTGI 417 (493)
T ss_pred CCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcCHHHHHHHHHHHHHHHHHHChHHHHHHHHhChHHHHHHHHHH
Confidence 322211112334333333333322211 111 133444444444444555555555555544444 789999999
Q ss_pred HHHHH-HHHHHHHHHHHHHHhcc------------CCchhHHHHHHHHHHHH
Q 012902 401 SNTAG-VLAGVFGTAATGYILQH------------GSWDDVFKVSVGLYLVG 439 (454)
Q Consensus 401 ~~~~~-~~g~~~~~~~~g~l~~~------------~g~~~~~~~~~~~~~~~ 439 (454)
..... .+|..++..+.+...+. ..|...|...+...++.
T Consensus 418 w~l~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~ 469 (493)
T PRK15462 418 YMLLSGAIANYLAGVIADQTSQASFDASGAINYSINAYIEVFDQITWGALAC 469 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHhccccCCccccccchhhhHHHHHHHHHHHHHHH
Confidence 85533 46666666655544311 13556676666655544
No 108
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.91 E-value=3.9e-22 Score=191.82 Aligned_cols=339 Identities=17% Similarity=0.194 Sum_probs=249.4
Q ss_pred hcchhhhhhcCCChhhHHHHHHHHHHHHHHhhhhhhhhhc----cccchHH-HHHHHHHHHHHHhhhhhc-c-cc----c
Q 012902 67 IAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWAD----TVGGKAV-LGFGVVWWSIATALTPVA-A-KL----G 135 (454)
Q Consensus 67 ~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~d----r~Grr~~-~~~~~~~~~~~~~l~~~~-~-~~----~ 135 (454)
...+.+.+.+|+++..+|.+..+..+..++..|+.|.++| |+||||. ++.|.+..+++..++... | .. .
T Consensus 23 ~~~~f~~~~~gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~~l~g~i~~~~~~~llf~~~p~~~~~~~~ 102 (428)
T PF13347_consen 23 YLLYFYTDVLGLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTRWGRRRPWILIGAILLALSFFLLFSPPPAGLSFTAK 102 (428)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccccccceEeehhhHHHHHHHHHhhccccchhhhhhH
Confidence 4456677888999999999999999999999999999999 8998777 567888888888887766 3 11 1
Q ss_pred HHHHHHHHHHHHhhcccchhhhhHHHhhhcC-ccchHHHHHHHHhhHHHHHHhHHhHHHHHhhcc-------CcchhHHH
Q 012902 136 LPFLLVVRVFMGIGEGVAMPAMNNILSKWVP-VAERSRSLALVYSGMYLGSVTGLAFSPFLIHRF-------GWPSVFYS 207 (454)
Q Consensus 136 ~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~-~~~rg~~~~~~~~~~~~g~~ig~~l~~~l~~~~-------gwr~~f~~ 207 (454)
...+.+.-++..++......+..++..|..+ +|+|.+..+.-..+..+|..+...+.+.+.+.. +|++...+
T Consensus 103 ~~~~~~~~~l~~~~~t~~~i~~~al~~~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~~~l~~~~g~~~~~~~~~~~~~v 182 (428)
T PF13347_consen 103 LVWLFVFYILFDIAYTFVQIPYNALIPELTPDPDERTRLSSWRMIFSMIGSLLASFLAPILVSWFGGGDTSNGYRWMALV 182 (428)
T ss_pred HHHHHHHHHHHHHhhhhccCchhhcCccccccHhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhccCccchHHHHHHHH
Confidence 2345677777899999999999999999997 478999999999999998876666666655322 69999999
Q ss_pred HhHHHHHHHHHHHHhcCCCCCCCCCCChhhhhhhhhccccCCCCCCcchhHhhcCcchHHHHHHHHHHHHHHHHHHhhHH
Q 012902 208 FGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMP 287 (454)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (454)
.+++.++..++..+..+|++++.++.++ +...+..+++++|||.++.+....++............+
T Consensus 183 ~~iv~~v~~~i~~~~~ke~~~~~~~~~~-------------~~~~~~~~~~~~~nr~~~~l~~~~~~~~~~~~~~~~~~~ 249 (428)
T PF13347_consen 183 LAIVGLVFFLITFFFVKERSVEVTEQEK-------------KISLRDSLRSLFRNRPFRILLLAFFLQWLAFALMNTFLP 249 (428)
T ss_pred HHHHHHHHhhhhhheeeecccccccccc-------------ccccccchhhhcccchHHHHHHHHHHHHhhhhhhhhHHH
Confidence 9999988888888877772222111111 111245677889999999999999999999988888889
Q ss_pred HHHHHHhCCcccchhhHhHHHHHHHHHHHHHHHHHhhhhhhcCccchhhHHHHHHHHHHHHHHHHHHhhc-cChhHHHHH
Q 012902 288 TYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSH-VDSPAMAVL 366 (454)
Q Consensus 288 ~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 366 (454)
.|.++..|.+ ...+.......+..+++.++.++++||+|+|+....+ ............... .+.....+.
T Consensus 250 y~~~~vl~~~-~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~i~ 321 (428)
T PF13347_consen 250 YYFTYVLGNE-GLISIFMLIFFVASIVGSPLWGRLSKRFGKKKVYIIG-------LLLAALGFLLLFFLGPGSPWLVLIL 321 (428)
T ss_pred HHHHHHhcCc-hhhHHHHHHHHHHHHHHHHHHHHHHHHccceeehhhh-------HHHHHHHHHHHHHHHhhhHHHHHHH
Confidence 9999987776 5667777888899999999999999999999754422 111111111111222 334444444
Q ss_pred HHHHHHhhhhhhcchhhhhhcccc-------cccchhHHHHHHHHHHHHHHHHHHHHHHHhccCCch
Q 012902 367 CMACSQGTDAFSQSGLYSNHQDIA-------PRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWD 426 (454)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~ 426 (454)
..+.+.+.+...........+..+ +++.|...|+.+....++..+++.+.|.+.+..||.
T Consensus 322 ~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i~g~~l~~~Gy~ 388 (428)
T PF13347_consen 322 FILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGAIVGLLLALVGYD 388 (428)
T ss_pred HHHhHhhhcccccccccccccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHHHHHHHHHHhCcC
Confidence 455555554444333333333222 245799999999999999999999999998876554
No 109
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.91 E-value=3.8e-22 Score=179.93 Aligned_cols=393 Identities=14% Similarity=0.093 Sum_probs=284.4
Q ss_pred cchHHHHHHHHHHHHHHHHhhhchhhhhcchhhhhhcCCChhhHHHHHHHHHHHHHHhhhhhhhhhccccchHHHHHHHH
Q 012902 40 NSYKQIISLCVGNFEQIFIVFGQVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVV 119 (454)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~ 119 (454)
-+++++++++..++..+.+.+.+..+++........|+ +.+..-|+.-+|.+.+....+++-|+.||+|-|....++..
T Consensus 39 Vy~rRW~vLl~~slL~~SN~~qWI~ya~i~n~~~~~Yg-s~~~~~wlsmIym~v~vp~gf~~mw~ldk~GLR~a~llgt~ 117 (480)
T KOG2563|consen 39 VYPRRWVVLLAFSLLNFSNGMQWIQYAPINNYVNSFYG-SSSAADWLSMIYMVVSVPFGFAAMWILDKFGLRTALLLGTV 117 (480)
T ss_pred cchhHhHHHHHHHHHHhcCcchheeehhHHHHHHHHhc-chHHHHHHHHHHHHHHHHHhhHHHHhhcccchHHHHHHHHH
Confidence 34455555555556555788888888888888888899 88888999999999999999999999999999999999999
Q ss_pred HHHHHHhhhhhcccc----cHH--HHHHHHHHHHhhcccchhhhhHHHhhhcCccchHHHHHHHHhhHHHHHHhHHhHHH
Q 012902 120 WWSIATALTPVAAKL----GLP--FLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSP 193 (454)
Q Consensus 120 ~~~~~~~l~~~~~~~----~~~--~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~ig~~l~~ 193 (454)
+.++|..+-..+... .++ ....+..+.+.+.-.....-..+..-|+|+++|..+..+-..+..+|.++|.++..
T Consensus 118 ln~iGa~Ir~iss~p~v~~~f~~~l~~~Gq~iaa~Aq~Fim~lPskiA~~WF~~~qra~A~~~~v~~n~LGvavg~llpp 197 (480)
T KOG2563|consen 118 LNGIGAWIRLISSLPFVPPLFRRPLTHTGQSIAAAAQPFILGLPSKIAAVWFPPDQRAIATVLGVMGNPLGVAVGFLLPP 197 (480)
T ss_pred HHHHHHHHhhhccCccccccchhhhhHHhHHHHHHhhhHhhccccHHHHhhCCcchhhhhhhHHHhcchHHHHHHhhccc
Confidence 999999987665421 344 67788999999888777777788899999999999999999999999999988888
Q ss_pred HHhhc------cCcch--hHHHHhHHHHHHHHHHHHhcCCCCCCCCCCChhhhhhhhhccccCCCCCCcchhHhhcCcch
Q 012902 194 FLIHR------FGWPS--VFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPV 265 (454)
Q Consensus 194 ~l~~~------~gwr~--~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (454)
.+..+ ..|.. .|+..+.++.+.+.+..+..+++|+.++.......+ +.....+.+..++|+++
T Consensus 198 ilV~~~~~~~~~~~~~~~~f~~~~~l~~l~l~l~~~~~~~~P~tPps~s~~~~~---------~~~f~~si~~~~~n~~F 268 (480)
T KOG2563|consen 198 ILVPSSKDSEDNSWLFFTLFLGVECLAALLLALVLFVFTKKPPTPPSASQAALQ---------DASFPKSIKSCFKNRQF 268 (480)
T ss_pred eecCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCchhHhhhh---------cCcHHHHHHHHHcCccH
Confidence 77653 34654 456556666665555666666655544332222211 11124567889999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCcccchhhHhHHHHHHHHHHHHHHHHHhhhhhhcCccchhhHHHHHHHHH
Q 012902 266 WALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGF 345 (454)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~ 345 (454)
....+.+......+++..+.+-.-+.. .|++...+|.......+++++++.+.|.+.||.+.-+... +.......
T Consensus 269 ~il~~~ygi~~g~F~~l~~~l~~~l~~-sgY~~~~aG~ig~l~iv~Gmlga~~~gii~Dktk~fk~~~----~v~~~~~~ 343 (480)
T KOG2563|consen 269 IILAICYGIGLGLFNSLSTLLNLALCP-SGYEGVFAGYIGALMIVAGMLGALASGIIADKTKKFKLTT----LVLYLFAL 343 (480)
T ss_pred HHHHHHHhhhHHHHHHHHHHhhhcccc-ccCCccccchhHHHHHHHHHHHHHHHHhhhhhhhhHHHHH----HHHHHHHH
Confidence 999998888888888887777766666 4888889999999999999999999999999998664221 11111111
Q ss_pred HHHHHHHHHh--hccChhHHHHHHHHHHHhhhhhhcchhhhhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHhccC
Q 012902 346 LGPAFFLTQL--SHVDSPAMAVLCMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHG 423 (454)
Q Consensus 346 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~ 423 (454)
... ..+... ...........+..++.+..+..+...-.-.+...|..-++..|+.+..+++-+.+-..+.+...+..
T Consensus 344 v~~-~~l~~~t~~~~~~viv~~t~~~~g~~~~~~~Pig~ElgvE~TyPv~E~tSsGll~~~gq~f~~~~~~~~~~~~~~~ 422 (480)
T KOG2563|consen 344 VGT-LMLLTCTLFLGDSVIVFTTCGLLGFFGTGYLPIGFELGVETTYPVAEGTSSGLLNLSGQIFGVILVFIMGILAEDL 422 (480)
T ss_pred HHH-HHHHHhhccCCceEehhhhHHHHHHhhcCCCCcceeeeeeeccccCCcccceeEEeehhHHHHHHHHHHHHHhhcc
Confidence 111 111111 12233344455555555555555444444456778887888899999999999999999999998876
Q ss_pred C----chhHHHHHHHHHHHHHHHHHHhcc
Q 012902 424 S----WDDVFKVSVGLYLVGTAVWNLFST 448 (454)
Q Consensus 424 g----~~~~~~~~~~~~~~~~~~~~~~~~ 448 (454)
+ +...-+.....+.+.+++..++++
T Consensus 423 ~~~~~~~~~~i~~~~~~~l~~~lva~~r~ 451 (480)
T KOG2563|consen 423 GPPGNTFPANIFLTVSALLGAILVAFFRP 451 (480)
T ss_pred CCCCCCccchhHhHHHHHHHHHHHhhhhh
Confidence 6 555555566666666655555544
No 110
>PRK09848 glucuronide transporter; Provisional
Probab=99.90 E-value=3.5e-21 Score=186.43 Aligned_cols=335 Identities=14% Similarity=0.057 Sum_probs=206.7
Q ss_pred cchhhhhhcCCChhhHHHHHHHHHHHHHHhhhhhhhhhccc----cchHHH-HHHHHHHHHHHhhh-h----hcccccHH
Q 012902 68 AILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTV----GGKAVL-GFGVVWWSIATALT-P----VAAKLGLP 137 (454)
Q Consensus 68 ~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~----Grr~~~-~~~~~~~~~~~~l~-~----~~~~~~~~ 137 (454)
..+++.+++|++..++|.+.+...+..++..++.|+++||. |||+.. ..+.+...+...+. . +++....+
T Consensus 31 l~~y~~~~~gl~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (448)
T PRK09848 31 LLSYYTDVAGVGAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLMIFSVLVFWVPTDWSHSSKVV 110 (448)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHHHHHHHHHHHHhCcCCCCcchHHH
Confidence 34567888899999999999999999999999999999996 777754 55555444444332 2 12201223
Q ss_pred HHHHHHHHHHhhcccchhhhhHHHhhhcCc-cchHHHHHHHHhhHH-----HHHHhHHhHHHHHhhcc--CcchhHHHHh
Q 012902 138 FLLVVRVFMGIGEGVAMPAMNNILSKWVPV-AERSRSLALVYSGMY-----LGSVTGLAFSPFLIHRF--GWPSVFYSFG 209 (454)
Q Consensus 138 ~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~-~~rg~~~~~~~~~~~-----~g~~ig~~l~~~l~~~~--gwr~~f~~~~ 209 (454)
.++..-++.+++.+...++..++..|..++ ++|.+..++-..+.+ ++..++|.+.+...+.. +|.....+.+
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~~p~i~~~~g~~~~~~~~~~~~~~~ 190 (448)
T PRK09848 111 YAYLTYMGLGLCYSLVNIPYGSLATAMTQQPQSRARLGAARGIAASLTFVCLAFLIGPSIKNSSPEEMVSVYHFWTIVLA 190 (448)
T ss_pred HHHHHHHHHHHHHHHhcccHhhhhhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHH
Confidence 345556778888888888878887777644 678887776654433 44555565554332111 1211112333
Q ss_pred HHHHHHHHHHHHhcCCCCCCCCCCChhhhhhhhhccccCCCCCCcchhHhhcCcchHHHHHHHHHHHHHHHHHHhhHHHH
Q 012902 210 SLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTY 289 (454)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (454)
+++++..++.....||+++++.+. +.....++.++|||.++...+..++............|.|
T Consensus 191 v~~~~~~~~~~~~~~e~~~~~~~~----------------~~~~~~~~~l~~n~~f~~~~~~~~~~~~~~~~~~~~~~~~ 254 (448)
T PRK09848 191 IAGMVLYFICFKSTRENVVRIVAQ----------------PSLKISLQTLKRNRPLFMLCIGALCVLISTFAVSASSLFY 254 (448)
T ss_pred HHHHHHHHHHHcCcEeccCCCccC----------------CCHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHhhhheee
Confidence 333333333333344432221110 0113346778999999999888888888888888888888
Q ss_pred HHHHhCCcccchhhHhHHHHHHHHHHHHHHHHHhhhhhhcCccchhhHHHHHHHHHHHHHHHHHHhhccChhHHH-HHHH
Q 012902 290 YNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMA-VLCM 368 (454)
Q Consensus 290 l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 368 (454)
+++.+|.++...++......++.+++.++.+++.||+++|+... ....+...+..........+.+.. ....
T Consensus 255 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~~~-------~g~~~~~i~~~~~~~~~~~~~~~~~~~~~ 327 (448)
T PRK09848 255 VRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKNTFL-------IGALLGTCGYLLFFWVSVWSLPVALVALA 327 (448)
T ss_pred EeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHH-------HHHHHHHHHHHHHHHcCchhHHHHHHHHH
Confidence 88888887766655555556677888999999999999884332 222111111122212222223322 2233
Q ss_pred HHHHhhhhhhcchhhhhhccccc-------ccchhHHHHHHHHHHHHHHHHHHHHHHHhccCCc
Q 012902 369 ACSQGTDAFSQSGLYSNHQDIAP-------RYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSW 425 (454)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~ 425 (454)
+.+.+.+...........+..++ ++.|...|+.+....+|..+++.+.|.+.+..||
T Consensus 328 l~g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg~aig~~i~g~~l~~~G~ 391 (448)
T PRK09848 328 IASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGSIPAFILGLSGY 391 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 33333333333222222232222 3469999999999999999999999999887666
No 111
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.89 E-value=8.8e-21 Score=184.43 Aligned_cols=339 Identities=13% Similarity=0.039 Sum_probs=220.0
Q ss_pred cchhhhhhcCCChhhHHHHHHHHHHHHHHhhhhhhhhhc----cccch-HHHHHHHHHHHHHHhhhhhcccc--c--HHH
Q 012902 68 AILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWAD----TVGGK-AVLGFGVVWWSIATALTPVAAKL--G--LPF 138 (454)
Q Consensus 68 ~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~d----r~Grr-~~~~~~~~~~~~~~~l~~~~~~~--~--~~~ 138 (454)
....+.+.+|++..++|.+..+..+..++..|+.|.++| |+||| +.++.+.+..+++..++-..+.. + +..
T Consensus 29 l~~yyt~v~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~il~g~i~~~i~~~llf~~p~~~~~~~~~~ 108 (473)
T PRK10429 29 LMYYYTDVVGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKPWILIGTLANSVVLFLLFSAHLFEGTAQYVF 108 (473)
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCCCCcchhHhhhhHHHHHHHHHHHcCCCCCccHHHHH
Confidence 344567778999999999999999999999999999999 66985 55667888878776666443311 1 334
Q ss_pred HHHHHHHHHhhcccchhhhhHHHhhhc-CccchHHHHHHHHhhHHHHHHhHHhHHHHHhh-------ccCcchhHHHHhH
Q 012902 139 LLVVRVFMGIGEGVAMPAMNNILSKWV-PVAERSRSLALVYSGMYLGSVTGLAFSPFLIH-------RFGWPSVFYSFGS 210 (454)
Q Consensus 139 l~~~r~l~G~~~g~~~~~~~~~i~~~~-~~~~rg~~~~~~~~~~~~g~~ig~~l~~~l~~-------~~gwr~~f~~~~~ 210 (454)
+++..++.+++.....++..++..|.. ++++|.+..++...+.++|..+.+.+...+.+ ..+|+....+.++
T Consensus 109 ~~~~~~l~~~~~t~~~ip~~al~~~lt~~~~eR~~l~~~~~~~~~ig~~~~~~~~~~~~~~~g~~~~~~g~~~~~~i~~~ 188 (473)
T PRK10429 109 VCVTYILWGMTYTIMDIPFWSLVPTLTLDKREREQLVPYPRFFASLAGFVTAGFTLPFVNYVGGGDRGFGFQMFTLVLIA 188 (473)
T ss_pred HHHHHHHHHHHHHHHcchHHhhhHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHH
Confidence 556677778888888888899999998 58899999999777777776666555443322 2356777677777
Q ss_pred HHHHHHHHHHHhcCCCCCCCCCCChhhhhhhhhccccCCCCCCcchhHhhcCcchHHHHHHHHHHHHHHHHHHhhHHHHH
Q 012902 211 LGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYY 290 (454)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 290 (454)
+.++..+..++..||+++++....++ +++...+..++.+++||.++.+....++..........+.+.|.
T Consensus 189 ~~~~~~~~~~~~~~e~~~~~~~~~~~----------~~~~~~~~~~~~~~~n~~~~~ll~~~~~~~~~~~~~~~~~~y~~ 258 (473)
T PRK10429 189 FFIVSTIITLRNVHEVYSSDNQVSAE----------GSHLTLKDIVALIYKNDQLSCLLGMALAYNIASNIINGFAIYYF 258 (473)
T ss_pred HHHHHHHHHHcCceecCCcccccccc----------ccCCCHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhheeeEE
Confidence 66666556665566643221110000 00111133455677899998888888888777777766666565
Q ss_pred HHHhCCcccchhhHhHHHHHHHHHHHHHHHHHhhhhhhcCccchhhHHHHHHHHHHH-HHHHHHH--hhccChhHHH-HH
Q 012902 291 NQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLG-PAFFLTQ--LSHVDSPAMA-VL 366 (454)
Q Consensus 291 ~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~-~~ 366 (454)
+...+ ++...+.+.....+..+++.++.+++.||+|+|+... ....+.. ....... ....++.+.. +.
T Consensus 259 ~y~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 330 (473)
T PRK10429 259 TYVIG-DADLFPYYLSYAGAANLVTLILFPRLVKSLSRRILWA-------GASIFPVLSCGVLLLMGLAAPHNALLIVIA 330 (473)
T ss_pred EEECC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHH-------HHHHHHHHHHHHHHHHhccCchhHHHHHHH
Confidence 55433 4555666667777888999999999999999985322 1111111 1111111 1122223322 22
Q ss_pred HHHHHHhhhhhhcchhhhhhccc-c-------cccchhHHHHHHHHHHHHHHHHHHHHHHHhccCCc
Q 012902 367 CMACSQGTDAFSQSGLYSNHQDI-A-------PRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSW 425 (454)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~-~-------~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~ 425 (454)
..+.+.+.+... .....+..|. + .|..|...|.......++..+++.+.|.+.+..||
T Consensus 331 ~~l~g~~~~~~~-~~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~al~~~i~g~~l~~~Gy 396 (473)
T PRK10429 331 GILLNIGTALFW-VLQVIMVADTVDYGEYKLGIRCESIAYSVQTMVVKGGSAFAAFFIGVVLGLIGY 396 (473)
T ss_pred HHHHHHHHHHHH-HHHHHHHhhhhhhhhHhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 333333333333 2223333222 2 23456799999999999999999999999987666
No 112
>PRK11462 putative transporter; Provisional
Probab=99.88 E-value=5.8e-19 Score=170.45 Aligned_cols=332 Identities=11% Similarity=0.048 Sum_probs=216.9
Q ss_pred cchhhhhhcCCChhhHHHHHHHHHHHHHHhhhhhhhhhcc----ccchHH-HHHHHHHHHHHHhhhhhccccc----HHH
Q 012902 68 AILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADT----VGGKAV-LGFGVVWWSIATALTPVAAKLG----LPF 138 (454)
Q Consensus 68 ~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr----~Grr~~-~~~~~~~~~~~~~l~~~~~~~~----~~~ 138 (454)
....+.+..|+++..+|.+..+.-+--++.-|+.|.++|| +||||. ++++.+..+++..++-..|..+ ...
T Consensus 32 l~~fyt~~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~llf~~p~~s~~~~~~y 111 (460)
T PRK11462 32 MMFFYTDIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVLAYSTPDLSMNGKMIY 111 (460)
T ss_pred HHHHHHHhhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHHHHHhCCCCCcchHHHH
Confidence 3444677889999999999999999999999999999996 798776 5567677787777665444111 344
Q ss_pred HHHHHHHHHhhcccchhhhhHHHhhhcC-ccchHHHHHHHHhhHHHHHHhHHhHHHHHhhcc-------CcchhHHHHhH
Q 012902 139 LLVVRVFMGIGEGVAMPAMNNILSKWVP-VAERSRSLALVYSGMYLGSVTGLAFSPFLIHRF-------GWPSVFYSFGS 210 (454)
Q Consensus 139 l~~~r~l~G~~~g~~~~~~~~~i~~~~~-~~~rg~~~~~~~~~~~~g~~ig~~l~~~l~~~~-------gwr~~f~~~~~ 210 (454)
+.+.-++..++......+-.++.+|..+ +|+|.+..++...+..+|..+++.+...+.+.. +|+....+.++
T Consensus 112 ~~~~~~~~~~~~t~~~ipy~al~~~lt~d~~eRt~l~s~r~~~~~iG~~~~~~~~~plv~~~g~~~~~~g~~~~~~i~~i 191 (460)
T PRK11462 112 AAITYTLLTLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLMMPLVNLIGGDNKPLGFQGGIAVLSV 191 (460)
T ss_pred HHHHHHHHHHHHHHHhccHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHH
Confidence 5666777788888888888999999986 688999999999999999888877766555433 57777777777
Q ss_pred HHHHHHHHHHHhcCCCCCCCCCCChhhhhhhhhccccCCCCCCcchhHhhcCcchHHHHHHHHHHHHHHHHHHhhHHHHH
Q 012902 211 LGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYY 290 (454)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 290 (454)
+.++...+.+...+|+++++++. . ..+..++..++||.++.+....++..............|.
T Consensus 192 i~~i~~~i~~~~~kE~~~~~~~~--~--------------~~~~~l~~~~~Nk~~~~l~~~~~~~~~~~~~~~~~~~y~~ 255 (460)
T PRK11462 192 VAFMMLAFCFFTTKERVEAPPTT--T--------------SMREDLRDIWQNDQWRIVGLLTIFNILAVCVRGGAMMYYV 255 (460)
T ss_pred HHHHHHHHHHhcceeccCCCccC--C--------------CHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhHhhhhh
Confidence 77666655555555543221110 0 0123456678899888777666666665555545455455
Q ss_pred HHHhCCcccchhhHhHHHHHHHHHHHHHHHHHhhhhhhcCccchhhHHHHHHHHHHHH-HHHHHHhhccChh-HHHHHHH
Q 012902 291 NQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGP-AFFLTQLSHVDSP-AMAVLCM 368 (454)
Q Consensus 291 ~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~ 368 (454)
+...|. +...+.++....++.+++.++++++.||+++|+.. ......... ....... ..++. .......
T Consensus 256 ~y~~g~-~~~~~~~l~~~~i~~iig~~l~~~l~~r~gkk~~~-------~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 326 (460)
T PRK11462 256 TWILGT-PEVFVAFLTTYCVGNLIGSALAKPLTDWKCKVTIF-------WWTNALLAVISLAMFFV-PMQASITMFVFIF 326 (460)
T ss_pred hhhcCC-hHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHH-------HHHHHHHHHHHHHHHHh-chhHHHHHHHHHH
Confidence 544443 33445566777888899999999999999988432 111111111 1111111 22222 2222222
Q ss_pred HHHHhhhhhhcchhhhhhccccc--------ccchhHHHHHHHHHHHHHHHHHHHHHHHhccCCc
Q 012902 369 ACSQGTDAFSQSGLYSNHQDIAP--------RYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSW 425 (454)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~ 425 (454)
+.+.+. ....+....+..|..+ +..|...+.......+|.++++.+.|.+.+..||
T Consensus 327 l~g~~~-~~~~~l~~~m~ad~~d~~e~~tG~r~~g~~~a~~~f~~Klg~alg~~i~g~iL~~~Gy 390 (460)
T PRK11462 327 VIGVLH-QLVTPIQWVMMSDTVDYGEWCNGKRLTGISFAGTLFVLKLGLAFGGALIGWMLAYGGY 390 (460)
T ss_pred HHHHHH-HHHHHHHHHHHHHhHhhhHHhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 333332 2222322333333322 2345556777789999999999999999987666
No 113
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=99.86 E-value=1.5e-18 Score=156.78 Aligned_cols=360 Identities=15% Similarity=0.140 Sum_probs=253.6
Q ss_pred hhhhcCCChhhHHHHHHHHHHHHHHhhhhhhhhhcccc-----chHHH-HHHHHHHHHHHhhhhhcc----c-------c
Q 012902 72 MSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVG-----GKAVL-GFGVVWWSIATALTPVAA----K-------L 134 (454)
Q Consensus 72 i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G-----rr~~~-~~~~~~~~~~~~l~~~~~----~-------~ 134 (454)
+..|++++....+.+.++..+... ..+.+|+.+|+.+ ||..+ ..|.++...+..+.+++. . .
T Consensus 6 MIvEL~vpA~lv~~lval~~~~ap-~R~~~G~~SD~~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~~~~~~~~ 84 (403)
T PF03209_consen 6 MIVELGVPAWLVALLVALHYLVAP-LRVWFGHRSDTHPSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAESGQQSSGP 84 (403)
T ss_pred HHHHhccHHHHHHHHHHHHHHHHH-HHHHhccccccCcccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHcccccccccc
Confidence 567899999999999998888765 5999999999999 88774 445566666555544321 0 0
Q ss_pred c-HH--HHHHHHHHHHhhcccchhhhhHHHhhhcCccchHHHHHHHHhhHHHHHHhHHhHHHHHhhccCcchhHHHH---
Q 012902 135 G-LP--FLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSF--- 208 (454)
Q Consensus 135 ~-~~--~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~ig~~l~~~l~~~~gwr~~f~~~--- 208 (454)
. .+ ...+.-.+.|+|.+...+...++++|..|+|+|+++.++.....-+|.+++..+.+.+.+.++-.-..-+.
T Consensus 85 ~~~g~~~a~l~F~l~G~G~~~s~T~~lALl~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~s~~rL~~v~~~~ 164 (403)
T PF03209_consen 85 FWLGLALAALAFLLYGLGVHASGTSFLALLADLAPEERRPRVVAIVWVMLIVGIIVSAIVFGRLLDPFSPERLIQVIQGV 164 (403)
T ss_pred cHHHHHHHHHHHHHHHhhHhHhHHHHHHHHHhcCCHhhhhhhHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHHHHH
Confidence 1 22 34455788999999999999999999999999999999999999999999999999998876643333332
Q ss_pred hHHHHHHHHHHHHhcCCCCCCCCCCChhhhhhhhhccccCCCCCCcchhHhhcCcchHHHHHHHHHHHHHHHHHHhhHHH
Q 012902 209 GSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPT 288 (454)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (454)
+.+.++..++..+ ..|++.++....+ +++++.....++++..+|+...+....++...+++.-...+-+
T Consensus 165 a~i~~~l~~ia~w-g~E~r~~~~~~~~----------~~~~~~f~~a~~~~~~~~~a~~f~~fl~l~t~a~~~QD~iLEP 233 (403)
T PF03209_consen 165 ALIALLLNLIALW-GQEPRRSRRAAAA----------ERPRPPFREAWRQVWASPQARRFFVFLFLGTLAFFMQDVILEP 233 (403)
T ss_pred HHHHHHHHHHHHH-hcccCCcccccCC----------CCCCccHHHHHHHHHhCCChhHHHHHHHHHHHHHHhhHHHcCC
Confidence 2222222222222 2232222211000 1112222456677888999999999999988898888888989
Q ss_pred HHHHHhCCcccchhhHhHHHHHHHHHHHHHHHHHhhh-hhhcCccchhhHHHHHHHHHHHHHHHHHHhhccChhHHHHHH
Q 012902 289 YYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADT-LVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLC 367 (454)
Q Consensus 289 ~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 367 (454)
|--+.+|+++.+...+......+..++-...|++..| .++++.. ......+..............+.+......
T Consensus 234 ygg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a-----~~G~~~~~~~f~lii~a~~~~~~~~~~~~~ 308 (403)
T PF03209_consen 234 YGGEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTA-----ALGCLLGALAFALIILAGPLGSPWLFRPGV 308 (403)
T ss_pred chhHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHH-----HHHHHHHHHHHHHHHHHHhcccchHHHHHH
Confidence 9999999999999999999999999999898887774 4433211 112222222222222222333444555666
Q ss_pred HHHHHhhhhhhcchhhhhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHhcc----------CCchhHHHHHHHHHH
Q 012902 368 MACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQH----------GSWDDVFKVSVGLYL 437 (454)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~----------~g~~~~~~~~~~~~~ 437 (454)
++++++.+.........+.+...+++.|..+|.-...+.+...++..++|.+.|. .+|..+|.+=++.++
T Consensus 309 ~l~G~g~G~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D~~~~~~~~~~~~aY~~VF~lEa~ll~ 388 (403)
T PF03209_consen 309 FLLGLGNGLFTVGALSLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGGALRDLVRALFGNSPALAYGVVFALEAVLLL 388 (403)
T ss_pred HHHHHhhhHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHHHHHH
Confidence 7777777777777777777777788999999999999999999999999998875 246667777777777
Q ss_pred HHHHHHHHhcc
Q 012902 438 VGTAVWNLFST 448 (454)
Q Consensus 438 ~~~~~~~~~~~ 448 (454)
++..+...+.+
T Consensus 389 ~a~~ll~~l~~ 399 (403)
T PF03209_consen 389 AALVLLGRLDR 399 (403)
T ss_pred HHHHHHHHhhh
Confidence 66665544433
No 114
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.86 E-value=4.7e-19 Score=159.38 Aligned_cols=355 Identities=17% Similarity=0.069 Sum_probs=263.5
Q ss_pred hhhHHHHHHHHHHHHHHhhhhhhhhhccccchHH-HHHHHHHHHHHHhhhhhccc-ccHHHHHHHHHHHHhhcccchhhh
Q 012902 80 PATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAV-LGFGVVWWSIATALTPVAAK-LGLPFLLVVRVFMGIGEGVAMPAM 157 (454)
Q Consensus 80 ~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~-~~~~~~~~~~~~~l~~~~~~-~~~~~l~~~r~l~G~~~g~~~~~~ 157 (454)
.+..+...++..+..++.+|+.|.++|+.|+||. +.....+..+++.+..+.++ .+++..++.-.+..++.....+..
T Consensus 57 ~a~~gy~~aia~llia~LapiLG~iaD~~g~Rk~~~~~f~~i~i~~~~~L~~i~~~s~~~~~l~~~il~~i~~~~s~Vfy 136 (438)
T COG2270 57 TAYWGYASAIAGLLIALLAPILGTIADYPGPRKKFFGFFTAIGIISTFLLWFIPPGSYLLLLLLFLILASIGFEFSNVFY 136 (438)
T ss_pred hhHHHHHHHHHHHHHHHHHHHhhhhhccCCCcchHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHhcchhheeh
Confidence 3557888889999999999999999999996665 55566666777777777773 234555677888999999999999
Q ss_pred hHHHhhhcCccchHHHHHHHHhhHHHHHHhHHhHHHH--H-h---------------hccCcchhHHHHhHHHHHHHHHH
Q 012902 158 NNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPF--L-I---------------HRFGWPSVFYSFGSLGTVWFTVW 219 (454)
Q Consensus 158 ~~~i~~~~~~~~rg~~~~~~~~~~~~g~~ig~~l~~~--l-~---------------~~~gwr~~f~~~~~~~~~~~~~~ 219 (454)
.+++.+..++++-++..++-.....+|..+--...-. . . +...-|.++.+.++-.++..+..
T Consensus 137 ds~L~~~~~k~~~~riS~lg~~~gylgs~i~li~~~~~~~~~~~~~~~~~l~~l~~~~~~~~ri~~~l~A~W~li~~iPm 216 (438)
T COG2270 137 DSMLPRLTTKDNMGRISGLGWALGYLGSVILLIFVVLGFALGQQTGITIILLGLPPADGEDVRITGLLAALWWLLFALPM 216 (438)
T ss_pred hhHhhhhcCccccCcccccccccccccchHHHHHHHHHHhcccccceeEEeeccCccccccchhHHHHHHHHHHHHHhHH
Confidence 9999999999888888887777667776665444311 1 1 12245778888888888888887
Q ss_pred HHhcCCCCCCCCCCChhhhhhhhhccccCCCCCCcchhHhhcCcchHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCccc
Q 012902 220 LSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLT 299 (454)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~ 299 (454)
++..++.++...+..+.-.... ++...+++++.+++++....++.++..-+.++....-..|....+|++..
T Consensus 217 ~~~v~~~~~~~~~~~~~l~~g~--------k~L~~t~k~i~~~~~i~~FLiA~~~~~DGv~til~~~~~fg~~~~gls~~ 288 (438)
T COG2270 217 ILNVHDAEKISSPPPTALRNGF--------KELKSTFKEIRGRKNLVLFLIARFFYIDGVNTILAMGGVFGAADLGLSST 288 (438)
T ss_pred HhcccccccccccchHHHHHHH--------HHHHHHHHHHhcccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCccHH
Confidence 7777766543211111000000 00134677888899999999999999999999999999999988999999
Q ss_pred chhhHhHHHHHHHHHHHHHHHHHhhhhhhcCccchhhHHHHHHHHHHHHHHHHHHhhccChhHHHHHHHHHHHhhhhhhc
Q 012902 300 ESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLCMACSQGTDAFSQ 379 (454)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (454)
+..++....++.+++|+++.|++.||++.|+....+ +........... ........++..++++.+.+....
T Consensus 289 ~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~-------lvi~~~~~~~~~-~~~~~~~f~i~gll~g~s~G~~qA 360 (438)
T COG2270 289 ELLLIGIALSVVAALGAIIAGFLDERFGSKPVLMIG-------LVILSIAALYLI-FLEGELDFWILGLLVGTSLGGAQA 360 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeehHH-------HHHHHHHHHHHH-HccccHHHHHHHHHHHHhcchHHH
Confidence 999999999999999999999999999999654322 222222222222 222344445555666777776666
Q ss_pred chhhhhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHhcc-CCchhHHHHHHHHHHHHHHHHHHhccCC
Q 012902 380 SGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQH-GSWDDVFKVSVGLYLVGTAVWNLFSTGE 450 (454)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 450 (454)
..-....+.+||++.++..|+++..+...+.+||.+.+.+.|. ++.+..+....++..++.++....+.++
T Consensus 361 ~SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~iTg~~r~g~~~i~vll~iGl~~L~~v~~~~ 432 (438)
T COG2270 361 SSRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQITGSSRAGVLSIIVLLLIGLLLLLRVKVPG 432 (438)
T ss_pred HHHHHHHHhCCCccccceeehhhhhhhHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHhhHhhEEeecCCC
Confidence 6666777888889999999999999999999999999999987 6677888888888888877666555443
No 115
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=99.85 E-value=2.5e-18 Score=159.82 Aligned_cols=340 Identities=15% Similarity=0.121 Sum_probs=251.5
Q ss_pred chhhhhhcCCChhhHHHHHHHHHHHHHHhhhhhhhhhcc----ccchHH-HHHHHHHHHHHHhhhhhccc----ccHHHH
Q 012902 69 ILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADT----VGGKAV-LGFGVVWWSIATALTPVAAK----LGLPFL 139 (454)
Q Consensus 69 ~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr----~Grr~~-~~~~~~~~~~~~~l~~~~~~----~~~~~l 139 (454)
+-.+.+.+|+++..+|.+..+.-+--++.-|+.|.++|| +||||. ++++.+..++.+.++-.++. .+....
T Consensus 36 l~fYTdv~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ip~~i~~~l~F~~p~~~~~~k~~ya 115 (467)
T COG2211 36 LFFYTDVFGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAIPFAIVAVLLFITPDFSMTGKLIYA 115 (467)
T ss_pred HHHHhcccCCcHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHhHHHHHHHHHHHcCCCcccCcchHHH
Confidence 334677789999999999999999999999999999996 787666 77788889998888877772 234556
Q ss_pred HHHHHHHHhhcccchhhhhHHHhhhcC-ccchHHHHHHHHhhHHHHHHhHHhHHHHHhh-------ccCcchhHHHHhHH
Q 012902 140 LVVRVFMGIGEGVAMPAMNNILSKWVP-VAERSRSLALVYSGMYLGSVTGLAFSPFLIH-------RFGWPSVFYSFGSL 211 (454)
Q Consensus 140 ~~~r~l~G~~~g~~~~~~~~~i~~~~~-~~~rg~~~~~~~~~~~~g~~ig~~l~~~l~~-------~~gwr~~f~~~~~~ 211 (454)
++.-.+.+++......+-.++.+|..+ ++||.+..++-+.+.++|..+...+...+.+ ..||+..-.+.+++
T Consensus 116 ~vtY~l~~l~YT~vniPy~al~~~iT~d~~ER~~l~s~R~~~~~~g~~l~~~~~~plv~~~g~~~~~~g~~~~~~~~~vi 195 (467)
T COG2211 116 LVTYMLLGLGYTLVNIPYGALGPEITQDPQERASLTSWRMVFASLGGLLVAVLFPPLVKLFGGGDKALGYQGTALVLGVI 195 (467)
T ss_pred HHHHHHHHHHHHheeCchhhcchhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHHHHH
Confidence 777889999999988888999999984 6789999999999999997777666655543 34788888888888
Q ss_pred HHHHHHHHHHhcCCCCCCCCCCChhhhhhhhhccccCCCCCCcchhHhhcCcchHHHHHHHHHHHHHHHHHHhhHHHHHH
Q 012902 212 GTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYN 291 (454)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 291 (454)
..+..+.+++-.+|++.+..+.++..+ .+.+..+...+|||.++..++...+...+.....+....|.+
T Consensus 196 ~~i~~l~~~~~v~ER~~~~~~~~~~~~-----------~~~~~~~~~~~~Nrp~~~~l~~~l~~~~~~~i~~s~~~yy~~ 264 (467)
T COG2211 196 GVILLLFCFFNVKERVVETQPTKTGVK-----------LKLKDSFLLIFKNRPLLLLLLMNLLLFIAFNIRGSIMVYYVT 264 (467)
T ss_pred HHHHHHHHHHHhhcccCccccCccccc-----------ccHHHHHHHHHccchHHHHHHHHHHHHHHHHHHhhhhheeEE
Confidence 888888888888877653322221110 111233456889999999999888888888888888888888
Q ss_pred HHhCCcccchhhHhHHHHHHHHHHHHHHHHHhhhhhhcCccchhhHHHHHHHHHHHHHHHHHHhhccChhHHHHHHHHHH
Q 012902 292 QVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLCMACS 371 (454)
Q Consensus 292 ~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 371 (454)
..+|.+.......+.....+.+++.+...++.+|+|+|+... ....+...+.....+...++....+...++.
T Consensus 265 y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~~-------~~~~~~~i~~~~~~f~~~~~~~l~~~~~~i~ 337 (467)
T COG2211 265 YVLGDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKKKLFL-------IGLLLLAVGYLLLYFTPAGSVVLIVVALIIA 337 (467)
T ss_pred EEcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHH-------HHHHHHHHHHHHHHhhcCcchHHHHHHHHHH
Confidence 888888888888888888888888999999999999995433 2222222222222222334444444443444
Q ss_pred Hhhhhhhcchhhhhhcccc--------cccchhHHHHHHHHHHHHHHHHHHHHHHHhccCCch
Q 012902 372 QGTDAFSQSGLYSNHQDIA--------PRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWD 426 (454)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~--------~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~ 426 (454)
........+...++..|.. .|..|...|....++.+|.+++..+.|++.+..||.
T Consensus 338 ~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~ala~~~~g~~L~~~Gyv 400 (467)
T COG2211 338 GVGTGIANPLPWAMVADTVDYGEWKTGVRREGIVYSGMTFFRKLGLALAGFIPGWILGAIGYV 400 (467)
T ss_pred HHHhhccccccHHHhcchhhHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 4444444444444443332 235688999999999999999999999999886654
No 116
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=99.85 E-value=2.5e-19 Score=166.69 Aligned_cols=394 Identities=17% Similarity=0.169 Sum_probs=249.5
Q ss_pred cchHHHHHHHHHHHHHHHHhhhchhhhhcchhhhhh--cCCChhhHHHHHHHHHHHHHHhhhhhhhhhccccc-hHHHHH
Q 012902 40 NSYKQIISLCVGNFEQIFIVFGQVNMSIAILPMSAE--FNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGG-KAVLGF 116 (454)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~--~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Gr-r~~~~~ 116 (454)
+.+|+.+.+..+..+ +.....+.+.+..-+..++ .+.+.+..|++.++..++.+++++.+|.+..|.++ |+.++.
T Consensus 30 ~t~wrsi~l~~~~sf--l~~v~~sI~~~s~wpYl~~lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~~~~k~Pli~ 107 (488)
T KOG2325|consen 30 KTNWRSIYLALLNSF--LVAVQFSIYLTSMWPYLQKLDPTATATFFGLVIAASSLGHAIFSLIFGIWSNKTGSVKKPLIV 107 (488)
T ss_pred CCchHhHHHHHHHHH--HHhhhheEEEeecchhhhhcCCCCCcchhhHHHHHHHHHHHhcchhhcccccccCCcccCHHH
Confidence 344555555554444 5667766666654444444 78888999999999999999999999999999996 888889
Q ss_pred HHHHHHHHHhhh-hhc--ccccHHHHHHHHHHHHhhcccchhhhhHHHhhhcCccchHHHHHHHHhhHHHHHHhHHhHHH
Q 012902 117 GVVWWSIATALT-PVA--AKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSP 193 (454)
Q Consensus 117 ~~~~~~~~~~l~-~~~--~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~ig~~l~~ 193 (454)
|.++..+|.++. ++. ++...+.++++|++.|+|.| .....-+|+++....++|.|+++....+..+|..+||.+..
T Consensus 108 s~ii~~~g~llY~~l~~~~~~~~y~mL~~R~l~Gvg~~-n~a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~ 186 (488)
T KOG2325|consen 108 SFLIAIIGNLLYLALAYVPNGVKYLMLVARILTGVGVG-NFAVLRAYIADASTVEDRPRAFAATSGGFVLGIILGPTIQL 186 (488)
T ss_pred HHHHHHHHHHHHHHHHhcccchHHHHHHHHHHcCcCcc-cHHHHHHHHHhccCccchHHHHHHhhhHHHHHHHHhHHHHH
Confidence 999999999988 332 32146889999999999976 56777899999988899999999999999999999998887
Q ss_pred HHhhc--cC-----------cchhHHHHhHHHHHHHHHHHHhcCCCCCCCCCCChhhhhhhhhccccCCCCCCcchhHhh
Q 012902 194 FLIHR--FG-----------WPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLIL 260 (454)
Q Consensus 194 ~l~~~--~g-----------wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (454)
.+..- -| +..+-|+.+++.++..+....+.+|.+++..+.+.++.+ +++.+++..+..+ +
T Consensus 187 ~f~~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~i~~~f~E~~~~~~~~~~~~~~---~~~~~~~~~~~~~----~ 259 (488)
T KOG2325|consen 187 AFTPLGEKGFMILPGLIFNMYTAPAWLMAILWIIYIVIILFFFKEVYRGIIDKKKRSVE---EEKSDIEKVKKPK----L 259 (488)
T ss_pred HHhhhcCCceEEcCcceEEecchHHHHHHHHHHHHHHHHHhheeecccCccccccccch---hhccchhhhccCC----h
Confidence 76531 11 345678888888888888888888876654333221110 0010100000000 1
Q ss_pred cCcchHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCcccchhhHh----HHHHHHHHHHHHHHHHHh-hhhhhcCccchh
Q 012902 261 SKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFC----VLPWLTMAFSANLGGWIA-DTLVSKGLSVTT 335 (454)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~----~~~~~~~~~~~~~~g~l~-dr~~~~~~~~~~ 335 (454)
..+..+.+.+..+...+.+....+..+......++++.+++-... +..++....-.+...+.. .|+.+|+....+
T Consensus 260 d~~~~~vc~~~~~~~~~~~~~iet~~~~~~m~~y~w~~~~av~~~gi~~~~~g~ls~~~~l~~~f~~l~~i~~r~~~~~g 339 (488)
T KOG2325|consen 260 DWVAVLVCIFLRFVVNFIATTIETLSSALTMVMYGWTGSEAVLYNGITLSISGILSVILLLLYIFTRLGKIDKRRIILLG 339 (488)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHhccccchHHHhhhhHHHHHHHHHHHHHHHHHHHHhhhhccceeeeeh
Confidence 112334455555666666666677777777777787766654333 333333333222222222 222333322211
Q ss_pred hHHHHHHHHHHHHHHHHHHhhccC---------------------------hhHHHHHH--HHHHHhhhhhhcchhhhhh
Q 012902 336 VRKIMQSIGFLGPAFFLTQLSHVD---------------------------SPAMAVLC--MACSQGTDAFSQSGLYSNH 386 (454)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 386 (454)
. ...+....+......... +.+..... +.++.+.-....+....+.
T Consensus 340 ~-----l~~f~~~~i~~yp~~~~s~pv~~~~~~~~~~~~~~y~wc~~~~~v~~~~~l~~~i~~~g~~~P~~~~~~~tlyS 414 (488)
T KOG2325|consen 340 F-----LIFFLSYYIFTYPWGFYSGPVQPYNTTYAGCDFEEYSWCDTTTAVPLILYLISFIVVFGIAFPFISTALDTLYS 414 (488)
T ss_pred H-----HHHHHhhheeeeeccccccccccccccccCcCcccchhhccCcccChhhheeehhheeccccccccchHHHHHH
Confidence 0 011111111110000000 00011111 1112222222333555666
Q ss_pred cccccccchhHHHHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHHHHhcc
Q 012902 387 QDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWNLFST 448 (454)
Q Consensus 387 ~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 448 (454)
+.+.|++++++.|++......+..++|.+...+....|+++.+.+.....++....+..+.+
T Consensus 415 kiLgp~~q~~~qg~~~~~~s~~~~~~~~~~t~~~~~~g~~~v~~~~~~~~l~~~~l~~~~~~ 476 (488)
T KOG2325|consen 415 KILGPRDQGTMQGVFSISGSIARVVGPIFSTAIFTLSGPRPVWIILLCLLLVVAALWIVFLK 476 (488)
T ss_pred HHhCCccccceeEEEEeccchhhhhhHHHHhhhHHhcCccHHHHHHHHHHHHHHHHHHHHHH
Confidence 77889999999999999999999999999999999999999988888877777766655543
No 117
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.84 E-value=6.3e-19 Score=170.53 Aligned_cols=273 Identities=16% Similarity=0.207 Sum_probs=221.3
Q ss_pred HHhhhchhhhhcchhhhhhcCCChhhHHHHHHHHHHHHHHhhhhhhhhhccccchHHHHHHHHHHHHHHhhhhhcc----
Q 012902 57 FIVFGQVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAA---- 132 (454)
Q Consensus 57 ~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~l~~~~~---- 132 (454)
...+....+...+..+++.|+++.++.|++.+.+-++..+...+..+...|..|-+.+-.|.++++++++++++-+
T Consensus 108 ~q~l~~~y~~s~IttiErRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~HrPr~Ig~G~~~m~lgsll~alPHf~~~ 187 (735)
T KOG3626|consen 108 AQGLYVGYFNSVITTIERRFKISSSQSGLIASSYDIGNLLLIIFVSYFGSRGHRPRWIGIGLVLMGLGSLLFALPHFFSG 187 (735)
T ss_pred HHHhhhhhhhhhhhhhhhhcCCCCCcceeEeeecccchhhhhHhHHHhccccCccceeeechhHHHHHHHHHhChHHhcC
Confidence 5666667778888999999999999999999999999999999999999999999999999999999999987621
Q ss_pred -------------------------------------------ccc--HH-HHHHHHHHHHhhcccchhhhhHHHhhhcC
Q 012902 133 -------------------------------------------KLG--LP-FLLVVRVFMGIGEGVAMPAMNNILSKWVP 166 (454)
Q Consensus 133 -------------------------------------------~~~--~~-~l~~~r~l~G~~~g~~~~~~~~~i~~~~~ 166 (454)
..+ ++ .++++.++.|+|....++...+|+-|...
T Consensus 188 ~y~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~tlGisYiDDnvk 267 (735)
T KOG3626|consen 188 PYEYELEVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPIFTLGISYIDDNVK 267 (735)
T ss_pred cchhhhhhhhccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCCccCCCcccccccc
Confidence 000 23 56788999999999999999999999999
Q ss_pred ccchHHHHHHHHhhHHHHHHhHHhHHHHHhhcc-------------------CcchhHHHHhHHHHHHHHHHHHhcCCCC
Q 012902 167 VAERSRSLALVYSGMYLGSVTGLAFSPFLIHRF-------------------GWPSVFYSFGSLGTVWFTVWLSKAHSSP 227 (454)
Q Consensus 167 ~~~rg~~~~~~~~~~~~g~~ig~~l~~~l~~~~-------------------gwr~~f~~~~~~~~~~~~~~~~~~~~~~ 227 (454)
+++-+..+|+..+...+|.++|.++++++.+.+ -|..-|++.+.+.++..+..+++.++.|
T Consensus 268 ~~~SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~~~~~~a~p~f~fPk~lp 347 (735)
T KOG3626|consen 268 KKNSPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGALLLFSAVPLFFFPKELP 347 (735)
T ss_pred ccCCcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHhCcccCc
Confidence 999999999999999999999999999887522 1777888899998888888887766666
Q ss_pred CCCCCCChhhhhhhhhccc--cCCCC-------CCcchhHhhcCcchHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCcc
Q 012902 228 AEDPQLRPAEKKLIVSSCA--SKEPV-------KTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNL 298 (454)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~--~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~ 298 (454)
+..++.+.++.+..+.+.. .+++. .....+.+++||.+....+...+....+.++.+|+|.|+++++|.++
T Consensus 348 ~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~ikdfp~s~~~ll~N~if~~~~l~~~~~~~~~~G~~tFlPKyLE~Qfg~sa 427 (735)
T KOG3626|consen 348 KSQKRKRARDLHVLKTESGGAKSDKTFGKKIKDFPKSIKRLLSNPIFMLVVLASVIESLAITGYITFLPKYLETQFGISA 427 (735)
T ss_pred cccccchhhhhcccccccccccCCcchhhhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHhhHHHhhHHHHHHHcCCCH
Confidence 5443322222221111111 11111 11245668899999999999999999999999999999999999999
Q ss_pred cchhhHhHHHHH-HHHHHHHHHHHHhhhhhhc
Q 012902 299 TESGLFCVLPWL-TMAFSANLGGWIADTLVSK 329 (454)
Q Consensus 299 ~~~~~~~~~~~~-~~~~~~~~~g~l~dr~~~~ 329 (454)
..+..+....++ +..+|.+++|++.+|+..+
T Consensus 428 s~An~l~G~i~vp~~~~Gi~lGG~iikkfkl~ 459 (735)
T KOG3626|consen 428 SLANILTGSIGVPAAAVGIFLGGLIIKKFKLS 459 (735)
T ss_pred HHHHHHhhhhhhhhhhhhhhccceeeeeeccc
Confidence 999998866665 5566788899999998765
No 118
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=99.84 E-value=2.5e-22 Score=194.50 Aligned_cols=365 Identities=14% Similarity=0.152 Sum_probs=3.0
Q ss_pred HhhhchhhhhcchhhhhhcCCChhhHHHHHHHHHHHHHHhhhhhhhhhccccchHHHHHHHHHHHHHHhhhhhcc-----
Q 012902 58 IVFGQVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAA----- 132 (454)
Q Consensus 58 ~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~l~~~~~----- 132 (454)
...........+..+++.|+++.++.|++.+.+-++..+..++..++.+|..|-|.+-.|.+++++|++++++-+
T Consensus 15 q~~~~g~~~~~lttiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~hrprwig~g~~~~~~g~~l~~lPhf~~~~ 94 (539)
T PF03137_consen 15 QMMVSGYVNSSLTTIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRGHRPRWIGIGALLMGLGSLLFALPHFLSGP 94 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcceeeecHHHHHHHHHHHhccHhhcCC
Confidence 455666677788899999999999999999999999999999999999998888999999999999999987511
Q ss_pred -------------------------------------------cccHHHHHHHHHHHHhhcccchhhhhHHHhhhcCccc
Q 012902 133 -------------------------------------------KLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAE 169 (454)
Q Consensus 133 -------------------------------------------~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~ 169 (454)
..-+..++++.++.|+|....++...+|+-|..++++
T Consensus 95 y~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYiDDnv~~~~ 174 (539)
T PF03137_consen 95 YSYEEASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYIDDNVSKKN 174 (539)
T ss_dssp ---------------------------------------------------------SSS--------------------
T ss_pred CccccccccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeeecccccccc
Confidence 0013678889999999999999999999999999999
Q ss_pred hHHHHHHHHhhHHHHHHhHHhHHHHHhhc---------------------cC-cchhHHHHhHHHHHHHHHHHHhcCCCC
Q 012902 170 RSRSLALVYSGMYLGSVTGLAFSPFLIHR---------------------FG-WPSVFYSFGSLGTVWFTVWLSKAHSSP 227 (454)
Q Consensus 170 rg~~~~~~~~~~~~g~~ig~~l~~~l~~~---------------------~g-wr~~f~~~~~~~~~~~~~~~~~~~~~~ 227 (454)
-+.++|+..+...+|.++|..+++.+.+. .| |...|++.+.+.++..+..+.+.++-|
T Consensus 175 splYiGi~~~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~g~~~~l~aipl~~FPk~lp 254 (539)
T PF03137_consen 175 SPLYIGILYAMSILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFLICGILLFLSAIPLFFFPKKLP 254 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CccchhhhhHHhhccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHcCCccCC
Confidence 99999999999999999999999877642 12 777788888888877777666655544
Q ss_pred CCCCCCChhhh---hh-h--hhccccC---------CCCCCcchhHhhcCcchHHHHHHHHHHHHHHHHHHhhHHHHHHH
Q 012902 228 AEDPQLRPAEK---KL-I--VSSCASK---------EPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQ 292 (454)
Q Consensus 228 ~~~~~~~~~~~---~~-~--~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 292 (454)
..++..++++. +. . .++.+++ -+......+.+++||.+....+..........++.+|.|.|++.
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~df~~~l~~Ll~Np~f~~~~la~~~~~~~~~G~~tF~pKylE~ 334 (539)
T PF03137_consen 255 GTSERQEEKESSERKEEDSDKDSFKDPKSKKSFGKSIKDFPKALKRLLTNPVFMCLILAGVFESFIVSGFATFLPKYLES 334 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CcccccchhhhhhcchhhhhhhcccccccccchhhhhhhHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44111111000 00 0 0000000 01112345678899999999999999999999999999999999
Q ss_pred HhCCcccchhhHhHHHHH-HHHHHHHHHHHHhhhhhhcCccchhhHHHHHHHHHHHHHHHHHH-----------hhc---
Q 012902 293 VLHFNLTESGLFCVLPWL-TMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQ-----------LSH--- 357 (454)
Q Consensus 293 ~~g~s~~~~~~~~~~~~~-~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~--- 357 (454)
+++.++.+++++.....+ +.++|.+++|++.+|++.+.............+..+.....++. ...
T Consensus 335 QF~~sas~A~~l~G~v~ip~~~~G~llGG~ivkk~kl~~~~~~~~~~v~~~v~~~~~~~~~~~~C~~~~~aGv~~~y~~~ 414 (539)
T PF03137_consen 335 QFGLSASQASLLTGIVSIPGAALGILLGGYIVKKFKLSARGAAKFCIVVSIVSVILYSPLFFLGCPNPPIAGVTVPYHNS 414 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HhCCCHHHHHHHHhhhhcchhheehheEEEEEEEecCcHHHHHHHHHHHHHHHHHHHHHHHeecCCCCceeeecCccccc
Confidence 999999999988866665 66788899999999987553222111111111111110001100 000
Q ss_pred ----c-----------------------------ChhHHHHHH-HHHHHhhhhhhcchhhhhhcccccccchhHHHHHHH
Q 012902 358 ----V-----------------------------DSPAMAVLC-MACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNT 403 (454)
Q Consensus 358 ----~-----------------------------~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 403 (454)
. +....+... ++..+.......|......+.+++++|+.+.|+...
T Consensus 415 ~~~~~~~~~~~~Cn~~~~~~~~~a~~G~C~~~C~~~~~~Fl~~~~~~~~~~~~~~~p~~~i~LR~V~~~~rs~AlGv~~~ 494 (539)
T PF03137_consen 415 TSSSPSCNLTCSCNSCCSSGNGSATPGKCPSDCCNKLIPFLILLFILSFFTFMSQVPSTLITLRCVPPEQRSFALGVQWL 494 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cCCCCCCCCCCCCCCccCCCcccccCCCcCcccccccHHHHHHHHHHHHHHHhcccchheeeeccCChhhcchhhhHHHH
Confidence 0 000111111 222223333445555556677888999999999886
Q ss_pred HH-HHHHHHHHHHHHHHhcc
Q 012902 404 AG-VLAGVFGTAATGYILQH 422 (454)
Q Consensus 404 ~~-~~g~~~~~~~~g~l~~~ 422 (454)
+. -+|..-||.+.|.+.|.
T Consensus 495 ~~rllg~IPgPIifG~iiD~ 514 (539)
T PF03137_consen 495 IIRLLGFIPGPIIFGAIIDS 514 (539)
T ss_dssp --------------------
T ss_pred HHHhhcCcchHHHHhHHHhh
Confidence 65 45889999999999997
No 119
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=99.81 E-value=4.5e-17 Score=150.04 Aligned_cols=403 Identities=15% Similarity=0.109 Sum_probs=241.4
Q ss_pred hHHHHHHHHHHHHHHHHhhhchhhhh-cchhhhhhcC----CChhhHHHHHHHHHHHHHHhhhhhhhhhcc-ccchHHHH
Q 012902 42 YKQIISLCVGNFEQIFIVFGQVNMSI-AILPMSAEFN----WNPATVGLIQSSFFWGYLLTQIAGGIWADT-VGGKAVLG 115 (454)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~----~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr-~Grr~~~~ 115 (454)
.|....+...-+- .-++.+.+.. ..-++..+++ .|+++..-+.+.|..-.-+...++|+++|| .|+|+.+.
T Consensus 20 Pr~l~~if~vE~W---ERFsyYGmraiL~~Yl~~~~~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~tI~ 96 (498)
T COG3104 20 PRGLYLIFFVELW---ERFSYYGMRAILILYLYYQLGDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRTIV 96 (498)
T ss_pred CchHHHHHHHHHH---HHHhhhhhHHHHHHHHHHhccccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHH
Confidence 3445555555444 3333333332 3334555555 999999888898888888889999999999 79999999
Q ss_pred HHHHHHHHHHhhhhhcccccHHHHHHHHHHHHhhcccchhhhhHHHhhhcCcc--chHHHHHHHHhhHHHHHHhHHhHHH
Q 012902 116 FGVVWWSIATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVA--ERSRSLALVYSGMYLGSVTGLAFSP 193 (454)
Q Consensus 116 ~~~~~~~~~~~l~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~--~rg~~~~~~~~~~~~g~~ig~~l~~ 193 (454)
.|.++..+|-++.+.+...+...++++-.+.++|.|..-+...++++|.+|++ +|-..++++..+.++|+.++|.+.+
T Consensus 97 lGail~~iGh~~L~~~~~~~~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGsl~~p~i~~ 176 (498)
T COG3104 97 LGAILMAIGHLVLAISSVSGPGGLYIGLALIIVGTGLFKPNISSLLGELYPKDDPRRDGGFTLFYMGINIGSLIAPIITG 176 (498)
T ss_pred HHHHHHHHHHHHHhccccccccHHHHHHHHHHhccccccccHHHHHHHhcCCCCcccCCCccEEEEEeehHHHHHHHHHH
Confidence 99999999999998883115778899999999999999999999999999764 4778899999999999999999999
Q ss_pred HHhhccCcchhHHHHhHHHHHHHHHHHHhcCC---CCCCC--CCCChhhhhhh----------h------hcc-------
Q 012902 194 FLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHS---SPAED--PQLRPAEKKLI----------V------SSC------- 245 (454)
Q Consensus 194 ~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~---~~~~~--~~~~~~~~~~~----------~------~~~------- 245 (454)
++.+++||+..|...++-....++..+...+. .+.++ ...+..+.... . ..+
T Consensus 177 ~~~~~~g~~~gF~~aavGm~~gl~~f~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 256 (498)
T COG3104 177 LLAINYGWHVGFGLAAVGMIIGLVIFLLGRRHVKGIGGVPDPNPLSFNFLLPVLGGLVVMILAALLTLLLNQNTFSGVLL 256 (498)
T ss_pred HHHHhhCHHHHHHHHHHHHHHHHHHHHHccchhcCCCCCCCccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999877666654444433221 11111 11111100000 0 000
Q ss_pred -----------ccCCCCCCcchhHhhcCcchHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCc----ccchhhHhHHHHH
Q 012902 246 -----------ASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFN----LTESGLFCVLPWL 310 (454)
Q Consensus 246 -----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s----~~~~~~~~~~~~~ 310 (454)
.+....++.. .+.-|-.....+.+.....+..+....+-+..|..+.-+.+ .....+..+...+
T Consensus 257 ~~~i~~~~~~~~~~~~~~~~~-~er~r~~~~~~Lfl~~~iFW~~~~Q~~ssl~~~a~~~v~~~~~g~~vp~~~fQslNp~ 335 (498)
T COG3104 257 VISILIAIIYFAEAFRSPKVF-DERRRLLAAIPLFLFAVIFWALYEQMGSSLNLYADRNVNRQIFGFEVPPAWFQSLNPF 335 (498)
T ss_pred HHHHHHHHHHHHHHhccCccH-HHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHhhcccccceecCHHHHHhhCHH
Confidence 0000000000 00001111222333333333333333344444544432211 2345677788888
Q ss_pred HHHHHHHHHHHHhhhhhhcCccchhhHHHHHHHHHHHHHHHHHHhh-----c---cChhHHHHHHHHH-HHhhhhhhcch
Q 012902 311 TMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLS-----H---VDSPAMAVLCMAC-SQGTDAFSQSG 381 (454)
Q Consensus 311 ~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~---~~~~~~~~~~~~~-~~~~~~~~~~~ 381 (454)
.-++..++..++..|.++++.....-.+..+.+............. . ..+.++.+....+ ..+--...+..
T Consensus 336 ~Iii~~pI~a~l~~~l~~~~~~ps~~~KFalGl~l~g~~fl~l~~~~~~~~~~~~~~s~~~lil~y~l~s~gEL~iSpvG 415 (498)
T COG3104 336 FIILFSPILAALWTKLGRGNKQPSTPIKFALGLILAGLGFLILLLAGIWFGGPSGLVSVWWLVLSYVLQSFGELFISPVG 415 (498)
T ss_pred HHHHHHHHHHHHHhHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcCHHHHHHHHHHHHHHHHHhCHHH
Confidence 8888888888888886655332222123333333333322222211 1 1223344444444 44434444444
Q ss_pred hhhhhcccccccchhHHHHHHHHHHHHHHHHHHHHHH------HhccCCchhHHHHHHHHHHHHHHHHHHhcc
Q 012902 382 LYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGY------ILQHGSWDDVFKVSVGLYLVGTAVWNLFST 448 (454)
Q Consensus 382 ~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~------l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 448 (454)
........|++..+..++........|+.++..+.+. ..+.......|+.++....+..+......+
T Consensus 416 Ls~~t~laP~~~~s~~ma~wfLt~a~~~~l~g~va~~~~~~~~~~~~~~~~~~F~~~g~v~i~~~~~~~~~~~ 488 (498)
T COG3104 416 LSMVTKLAPPALKSFIMAMWFLTVAAGQTLGGQVAGLTAVTDPAYTAFIEGRVFGTIGVVAIVIGILLLLLSP 488 (498)
T ss_pred HHHHHHhChHHHHHHHHHHHHHHHHHHHHhhceecccccccchhhhhhhhhhhHHHHHHHHHHHHHHHHHhhH
Confidence 4445566666678888888766666666666666553 233356667788877777766665555443
No 120
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=99.76 E-value=3e-16 Score=148.47 Aligned_cols=359 Identities=16% Similarity=0.106 Sum_probs=241.2
Q ss_pred HHHHHHHHHHHHHHHhhhchhhhhcchhhhhhcCCCh-hhHHHHHHHH----HHHHHHhhhhhhhhhccccchHHHHHHH
Q 012902 44 QIISLCVGNFEQIFIVFGQVNMSIAILPMSAEFNWNP-ATVGLIQSSF----FWGYLLTQIAGGIWADTVGGKAVLGFGV 118 (454)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~-~~~g~~~s~~----~~~~~~~~~~~g~l~dr~Grr~~~~~~~ 118 (454)
.+....+...+ ..++......+..+.....++.+. ...+...... .+...+.++..|.++||+|||..+....
T Consensus 22 ~~~~~~fl~~f--a~~l~~~~~~~~~~~~~ct~~~~~~~~~~~~~~~~~~~~~~~~~i~s~~iG~lSD~~grk~~L~~~~ 99 (463)
T KOG2816|consen 22 HLEPLLFLYMF--SWGLSSTVMTNVILYLACTFGDDYQLENGLLLGVKQVTAGLLTLISSPLIGALSDRYGRKVVLLLPL 99 (463)
T ss_pred HHHHHHHHHHH--HHHhcCcchhhhhhhhhcccccCccchhhhhhhHHHHhhHHHHHHHHhhhHHhhhhhhhhhhHHHHH
Confidence 34444444444 455555455555555555444322 2223333333 6788899999999999999999999999
Q ss_pred HHHHHHHhhhhhcccccHHHHHHHHHHHHhhcc--cchhhhhHHHhhhcCccchHHHHHHHHhhHHHHHHhHHhHHHHHh
Q 012902 119 VWWSIATALTPVAAKLGLPFLLVVRVFMGIGEG--VAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLI 196 (454)
Q Consensus 119 ~~~~~~~~l~~~~~~~~~~~l~~~r~l~G~~~g--~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~ig~~l~~~l~ 196 (454)
....+..+...+.. +|.++ +.|+..+ .......++++|....++|...+|+.+.....+..++|.+++.+.
T Consensus 100 ~~~~l~~~~~~~~~---~~~~~----~~~l~g~~~~~~s~~~a~vadis~~~~R~~~~gll~~~~~~~~~~~p~~~~~~~ 172 (463)
T KOG2816|consen 100 FGTILPALCLLFQG---YWFFL----LLGLSGGFSAIFSVGFAYVADISSEEERSSSIGLLSGTFGAGLVIGPALGGYLV 172 (463)
T ss_pred HHHHHhHHHHHHHH---HHHhh----hcccccchhhhhhhhhhheeeccchhHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 98888888777665 44443 5555433 466778889999999999999999999999999999999999999
Q ss_pred hccCcchhHHHHhHHHHHHHHHHHHhcCCCCCCCCCCChhhhhhhhhccccCCCCCCcchhH---hhcCcchHHHHHHHH
Q 012902 197 HRFGWPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGL---ILSKPPVWALIVSHF 273 (454)
Q Consensus 197 ~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~ 273 (454)
+..|.-.+|.+..+..++..+....++||+..++++.... .......+.. .......++. .-.+|..+.+++..+
T Consensus 173 ~~~~~a~~f~ia~~~~~~~~~y~~~~l~Esl~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~r~~l~l~l~~~ 250 (463)
T KOG2816|consen 173 KFLGIALVFLIAAASGILSLLYMLLFLPESLQEKERSDAT-LRELTPGSLD-SSHVADAFQSLTKVGPDRLLLLLLLVAF 250 (463)
T ss_pred HhcCchHHHHHHHHHHHHHHHHHhhccccccCcccccccc-ccccCCCccc-chhhhhhhhhhcccCCCccchHHHHHHH
Confidence 9999999999999999999888888899876554443100 0000000000 0000111111 223556666666665
Q ss_pred HHHHHHHHHHh-hHHHHHHHHhCCcccchhhHhHHHHHHHHHHHHHHH-HHhhhhhhcCccchhhHHHHHHHHHHHHHHH
Q 012902 274 CHNWGTFILLT-WMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGG-WIADTLVSKGLSVTTVRKIMQSIGFLGPAFF 351 (454)
Q Consensus 274 ~~~~~~~~~~~-~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g-~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (454)
........-.. ..+.|++..+++++.+.+.+.+.......++..+.. .+...++.++ .+..+...-...
T Consensus 251 ~~~~~~~~~~~~~~~~yl~~~f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~l~~~~---------~i~lGl~~~~~~ 321 (463)
T KOG2816|consen 251 LSSLPEAGGASDVLLLYLKAKFGWNKKEFSDLLSLVSILGIISQLLLLPLLSSILGEKR---------LISLGLLSEFLQ 321 (463)
T ss_pred HHHHHHhcCceeEEEEEEeeecCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh---------HhhHHHHHHHHH
Confidence 55554443323 446778888999999999999999999999888766 7777788773 333444333333
Q ss_pred HHHhhccChhHHHHHHHHHHHhhhhhhcchhhhhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 012902 352 LTQLSHVDSPAMAVLCMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQH 422 (454)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~ 422 (454)
..........|................+...........++++|++.++...+..+...++|.+.+.++..
T Consensus 322 ~~~~af~~~~w~~~~~~v~~~~~~~~~pa~~s~~s~~v~~~e~g~v~~~is~i~~l~~~~~~~~~~~i~~~ 392 (463)
T KOG2816|consen 322 LLLFAFATETWMMFAAGVVVALAGIVFPAIRAFASILVSPEEQGKVFGIISGIEGLSGVVSPALYGNIFAL 392 (463)
T ss_pred HHHHHHhccchhhhHHHHHHHhhcchhHHHHhHHHhhcccccccchhhHHHHHHHHhhhhhHHHHHHHHHH
Confidence 33344444444444444444444444444444555667788999999999999999999999999988654
No 121
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=99.70 E-value=1e-14 Score=130.04 Aligned_cols=261 Identities=15% Similarity=0.158 Sum_probs=181.7
Q ss_pred chHHHHHHHHHHHHHHHHhhhchhhhhcchhhhhhcCCChhhHHHHHHHHHHHHHHhhhhhhhhhccccchHHHHHHHHH
Q 012902 41 SYKQIISLCVGNFEQIFIVFGQVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVW 120 (454)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~ 120 (454)
.+++.+.+-.++.. .+. ..+|..-.+-+++|.+..|++.+.........+..++.|.++||+|||+.-+.-.++
T Consensus 35 Fqr~yl~vY~La~~--aDW----LQGpY~Y~LY~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~cil 108 (354)
T PF05631_consen 35 FQRKYLLVYLLAMA--ADW----LQGPYLYALYESYGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRKKACLLFCIL 108 (354)
T ss_pred HHHHHHHHHHHHHH--HHH----hhcchhHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHH
Confidence 34444444444433 333 345555556678999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhhhcccccHHHHHHHHHHHHhhcccchhhhhHHH-hhhc----CccchHHHHHHHH-hhHHHHHHhHHhHHHH
Q 012902 121 WSIATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNIL-SKWV----PVAERSRSLALVY-SGMYLGSVTGLAFSPF 194 (454)
Q Consensus 121 ~~~~~~l~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i-~~~~----~~~~rg~~~~~~~-~~~~~g~~ig~~l~~~ 194 (454)
.+++++. -..+ +++.++++|++-|+++...++.-.++. .|.- |++..+..++... ...++-.+.+..++..
T Consensus 109 y~~scl~-k~~~--~~~~L~~GRvlgGiaTSLLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~ 185 (354)
T PF05631_consen 109 YSLSCLT-KHSS--NYPVLLLGRVLGGIATSLLFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANV 185 (354)
T ss_pred HHHHHHH-Hhcc--ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHH
Confidence 9998864 4556 899999999999999999999888874 5543 3333344444333 2334445555666667
Q ss_pred HhhccCc--chhHHHHhHHHHHHHHHHHHhcCCCCCCCCCCChhhhhhhhhccccCCCCCCcchhHhhcCcchHHHHHHH
Q 012902 195 LIHRFGW--PSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSH 272 (454)
Q Consensus 195 l~~~~gw--r~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (454)
+.+..+. ..+|....++.++..+++...-+|...+..+..+..+.. ...++.+++||+++.+.++.
T Consensus 186 l~~~~~~g~vaPF~~a~~~l~~~~~~I~~~W~ENyg~~~~~~~~~~~~------------~~a~~~i~~d~ril~LG~~q 253 (354)
T PF05631_consen 186 LADWFGFGPVAPFDAAIVLLAVAAVLILKTWPENYGDTSSSSSLSGSF------------REAWRAILSDPRILLLGLIQ 253 (354)
T ss_pred HHHHhCCCCcchHHHHHHHHHHHHHHHHhcccccCCCcccccchHHHH------------HHHHHHHHcCchhHHHHHHH
Confidence 7766554 788888877777776666655555443322111111110 23456678899999998888
Q ss_pred HHHHHHHHHHHh-hHHHHHHHHhCCcccchhhHhHHHHHHHHHHHHHHHHHhhh
Q 012902 273 FCHNWGTFILLT-WMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADT 325 (454)
Q Consensus 273 ~~~~~~~~~~~~-~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr 325 (454)
.+.-...+.+.. |-|. ++. +-....-|++++.+.++.++|+.+..++..|
T Consensus 254 slFE~smy~FVflWtPa-L~~--~~~~~P~GlIFssFM~a~MlGS~lf~~l~s~ 304 (354)
T PF05631_consen 254 SLFEGSMYLFVFLWTPA-LDP--DDEELPLGLIFSSFMVAMMLGSSLFSRLLSK 304 (354)
T ss_pred HHHHHHHHHheeeeece-ecC--CCCCCCchHHHHHHHHHHHHHHHHHHHHHhC
Confidence 888888877754 4554 332 2223457899999999999999888765554
No 122
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.69 E-value=5.6e-16 Score=148.20 Aligned_cols=161 Identities=16% Similarity=0.213 Sum_probs=134.9
Q ss_pred cchhhhhhcCCC--------hhhHHHHHHHHHHHHHHhhhhhhhhhccccchHHHHHHHHHHHHHHhhhhhccc--ccHH
Q 012902 68 AILPMSAEFNWN--------PATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAK--LGLP 137 (454)
Q Consensus 68 ~~~~i~~~~~~s--------~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~l~~~~~~--~~~~ 137 (454)
..+...++.+.+ .++.+...++..++..++.++.|+++||+|||+++..+.++.+++..+...... .+++
T Consensus 230 ~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~~~~~~v~~~l~~~~~~~~~~~~ 309 (418)
T TIGR00889 230 FGNGFLHEFGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFGIKKVMLLSLVAWALRFGFFAYGDPEYFGYA 309 (418)
T ss_pred hHHHHHHHhcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCcchhhHH
Confidence 334444555543 366799999999999999999999999999999999999999888777666321 0245
Q ss_pred HHHHHHHHHHhhcccchhhhhHHHhhhcCccchHHHHHHHH-hhHHHHHHhHHhHHHHHhhc------cCcchhHHHHhH
Q 012902 138 FLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVY-SGMYLGSVTGLAFSPFLIHR------FGWPSVFYSFGS 210 (454)
Q Consensus 138 ~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~-~~~~~g~~ig~~l~~~l~~~------~gwr~~f~~~~~ 210 (454)
.+++.+++.|++.+...+....+++|++|+++|++++|+.+ ...++|..+||.++|.+.++ +||+..|.+.++
T Consensus 310 ~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~f~~~~~ 389 (418)
T TIGR00889 310 LLFLSMIVYGCAFDFFNISGSVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTMWLFFAG 389 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHHHHHHHHH
Confidence 67788999999999888998999999999999999999997 67889999999999999987 469999999999
Q ss_pred HHHHHHHHHHHhcCCCCC
Q 012902 211 LGTVWFTVWLSKAHSSPA 228 (454)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~ 228 (454)
+.++..++.+++.+|+.+
T Consensus 390 ~~~i~~~l~~~~~~~~~~ 407 (418)
T TIGR00889 390 YIAILAVLFMIFFKYSHN 407 (418)
T ss_pred HHHHHHHHHHHHhCCccc
Confidence 888888888888877643
No 123
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.69 E-value=1.7e-16 Score=127.63 Aligned_cols=137 Identities=23% Similarity=0.417 Sum_probs=124.8
Q ss_pred HHHHHHHHHHhhhhhhhhhccccchHHHHHHHHHHHHHHhhhhhcccccHHHHHHHHHHHHhhcccchhhhhHHHhhhcC
Q 012902 87 QSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVP 166 (454)
Q Consensus 87 ~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~ 166 (454)
.+.+.++..+++++.|++.||+|||+.+..+..+..++.++....+ +++.+.+.+++.|++.+...+....++.|.+|
T Consensus 4 ~~~~~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 81 (141)
T TIGR00880 4 LAGYALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALSS--NITVLIIARFLQGFGAAFALVAGAALIADIYP 81 (141)
T ss_pred EEeehhHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhc--cHHHHHHHHHHHHHHHHHHHHhHHHHHHHHCC
Confidence 4456788899999999999999999999999999999999888888 89999999999999999999999999999999
Q ss_pred ccchHHHHHHHHhhHHHHHHhHHhHHHHHhhccCcchhHHHHhHHHHHHHHHHHHhcCC
Q 012902 167 VAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHS 225 (454)
Q Consensus 167 ~~~rg~~~~~~~~~~~~g~~ig~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~ 225 (454)
+++|++..++.+....+|..+++.+.+.+.+..+|++.+++.+...++..+...+..||
T Consensus 82 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (141)
T TIGR00880 82 PEERGVALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAAFILLAFLLPE 140 (141)
T ss_pred hhhhhHHHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHHHHHHhhcCCC
Confidence 99999999999999999999999999999998999999999888888776666665554
No 124
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=99.68 E-value=2.7e-15 Score=143.11 Aligned_cols=374 Identities=13% Similarity=0.048 Sum_probs=228.6
Q ss_pred hhcchhhhhhcCCChhhHHHHHHHHHHHHHHhhhhhhhhhcccc-----chHHHHHHHHHHHHHHhhhhhccc--ccHHH
Q 012902 66 SIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVG-----GKAVLGFGVVWWSIATALTPVAAK--LGLPF 138 (454)
Q Consensus 66 ~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G-----rr~~~~~~~~~~~~~~~l~~~~~~--~~~~~ 138 (454)
....|.+++++|+++++.....++..+...+ .++.|.++|-+. ||+-++++.++.+++.+..+..+. .+...
T Consensus 10 ~~~~~~l~~~l~ls~~~~~~~~~~~~lPw~~-Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~~~s~~~ 88 (433)
T PF03092_consen 10 LAIYPFLKDDLGLSPAQLQRLSSLASLPWSI-KPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPASESSAAI 88 (433)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHhCchHH-hhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcccccchhhh
Confidence 3456788999999999999999988888776 789999999874 555567777777666666655442 14566
Q ss_pred HHHHHHHHHhhcccchhhhhHHHhhhcC--ccchHHHHHHHHhhHHHHHHhHHhHHHHHhhccCcchhHHHHhHHHHHHH
Q 012902 139 LLVVRVFMGIGEGVAMPAMNNILSKWVP--VAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWF 216 (454)
Q Consensus 139 l~~~r~l~G~~~g~~~~~~~~~i~~~~~--~~~rg~~~~~~~~~~~~g~~ig~~l~~~l~~~~gwr~~f~~~~~~~~~~~ 216 (454)
..+.-++..+|.+.....+.+.+.|... +++||...+.......+|.+++..++|.+.+..++|+.|.+.+++.++..
T Consensus 89 ~~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~~~~~f~i~~~~~~l~~ 168 (433)
T PF03092_consen 89 AVVLLFLASFGYAFADVAADALVVELARREPESRGDLQSFVWGVRSVGSLVGSLLSGPLLDSFGPQGVFLISAALPLLML 168 (433)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhcCCCeEEehHHHHHHHHHH
Confidence 6677788899999999999999999983 34478889999999999999999999999999999999999988888877
Q ss_pred HHHHHhcCCCCCCCCCCChhhhhhhhhccccCCCCCCcchhHhhcCcchHHHHH-HHHHHHHHHHHHHhhHHHHHHHHhC
Q 012902 217 TVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIV-SHFCHNWGTFILLTWMPTYYNQVLH 295 (454)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~g 295 (454)
+..++..+|+++++........+...........+.....++.++.|.++...+ ..++.......-....-.+..+..+
T Consensus 169 ~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~a~~fy~~~~~~~ 248 (433)
T PF03092_consen 169 IVALFLLEERKVRPADEVFSFGKEEVPCLFGSFREQLSELWRALQQRAIWQPILFFIFFFNLPPSISSASSFYFQTDALG 248 (433)
T ss_pred HHHHHhhhhccccccchhhcccccccchhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccEEEEEecccc
Confidence 767776666222111100000000000000000011234455677777776555 2222222111110100001122234
Q ss_pred ---CcccchhhHhHHHHHHHHHHHHHHHHHhhhhhhcCccchhhHHHHHHHHHHHHHHHHHHh----------hccChhH
Q 012902 296 ---FNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQL----------SHVDSPA 362 (454)
Q Consensus 296 ---~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~ 362 (454)
+|+...+.+..+..++.++|..+......+..-|+ ......++.....+... ..++...
T Consensus 249 gp~fs~~f~~~~~~vg~~~~l~g~~~y~~~~~~~~~R~--------~~~~t~~~~~~~~l~~~~lv~~~n~~~Gi~d~~f 320 (433)
T PF03092_consen 249 GPHFSPSFYGTLSIVGSIASLLGILLYRKYFSNWSWRR--------IFVVTTLVSVLASLFDLLLVTRWNLDLGIPDQWF 320 (433)
T ss_pred ccccCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHH--------HHHHHHHHHHHHhcccEEEEEEEeeeeCcCCeEE
Confidence 77777777666666666666666555444444442 22222222211111110 0111222
Q ss_pred HHHHHHHHHHhhhhhhcchhhhhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHhccCC--------chhHHHHHHH
Q 012902 363 MAVLCMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGS--------WDDVFKVSVG 434 (454)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g--------~~~~~~~~~~ 434 (454)
...-..+..........|......+.+|+..-|+..++..++.|+|..++..++..+.+..+ .....++..+
T Consensus 321 ~lgd~~l~~~~~~i~~mP~lvl~a~lcP~G~Egt~yall~s~~Nlg~~~s~~lg~~l~~~~~vt~~~f~~l~~lili~~~ 400 (433)
T PF03092_consen 321 ALGDTILEEVIGMIAFMPSLVLAARLCPKGSEGTVYALLASFSNLGSSVSSTLGAFLMELFGVTRDDFSNLWLLILICSV 400 (433)
T ss_pred EEEhHHHHHHHHHHHHHHHHHHHHHHCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccchHHHHHHHHH
Confidence 22223333344444455666666777888899999999999999999999999999887643 2334444445
Q ss_pred HHHHHHHHHHHhcc
Q 012902 435 LYLVGTAVWNLFST 448 (454)
Q Consensus 435 ~~~~~~~~~~~~~~ 448 (454)
+.++...+..++.+
T Consensus 401 ~~ll~l~ll~lLp~ 414 (433)
T PF03092_consen 401 IQLLPLPLLFLLPP 414 (433)
T ss_pred HHHHHHHHHHHcCC
Confidence 55444444444444
No 125
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.64 E-value=3e-15 Score=141.78 Aligned_cols=149 Identities=11% Similarity=0.073 Sum_probs=129.4
Q ss_pred hcchhhhhhcCCChhhHHHHHHHHHHHHHHhhhhhhhhhccccchHHHHHHHHHHHHHHhhhhhcccccHHHHHHHHHHH
Q 012902 67 IAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFM 146 (454)
Q Consensus 67 ~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~r~l~ 146 (454)
...+++.++++.++.+.+++.+.+.++..+++++.|++.||+|||+.+..+.++.+++.++..+.+..+...++...++.
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (377)
T TIGR00890 226 GLYKPYGQSLGLSDGFLVLAVSISSIFNGGGRPFLGALSDKIGRQKTMSIVFGISAVGMAAMLFIPMLNDVLFLATVALV 305 (377)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHcccchhHHHHHHHHHH
Confidence 34455667889999999999999999999999999999999999999999999998888887777621223355667888
Q ss_pred HhhcccchhhhhHHHhhhcCccchHHHHHHHHhhHHHHHHhHHhHHHHHhhccCcchhHHHHhHHHHHH
Q 012902 147 GIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVW 215 (454)
Q Consensus 147 G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~ig~~l~~~l~~~~gwr~~f~~~~~~~~~~ 215 (454)
|++.+...+..+.++.|.+|+++|+++.|+.+....+|..++|.+.+.+.++.||++.|.+.+++.++.
T Consensus 306 g~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~f~~~~~~~~~~ 374 (377)
T TIGR00890 306 FFTWGGTISLFPSLVSDIFGPANSAANYGFLYTAKAVAGIFGGLIASHALTEIGFEYTFIVTGAFALTS 374 (377)
T ss_pred HHHhccchhccHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHh
Confidence 998888888888999999999999999999999999999999999999999999999999988776664
No 126
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.63 E-value=3.7e-15 Score=143.27 Aligned_cols=151 Identities=10% Similarity=0.072 Sum_probs=132.3
Q ss_pred hcCCChhhHHHHHHHHHHHHHHhhhhhhhhhccccchHHHHHHHHHHHHHHhhhhhcccccHHHHHHHHHHHHhhcccch
Q 012902 75 EFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMGIGEGVAM 154 (454)
Q Consensus 75 ~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~r~l~G~~~g~~~ 154 (454)
+.+.+..+.|++.++..++..++.+++|++.||+|+|+.+..+.++.+++.++.++++ |.+.+++.+++.|++.+...
T Consensus 256 ~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~l~~~~~--~~~~~~~~~~l~g~~~~~~~ 333 (420)
T PRK09528 256 TPEQGTRVFGYLNSFQVFLEALIMFFAPFIINRIGAKNALLLAGTIMAVRIIGSGFAT--GPLEVSILKLLHAFEVPFLL 333 (420)
T ss_pred ccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHhcc--cHHHHHHHHHHHHHHHHHHH
Confidence 3466778899999999999999999999999999999999999999999989999998 88999999999999988888
Q ss_pred hhhhHHHhhhcCccchHHHHHH-HHhhHHHHHHhHHhHHHHHhhccCcchhHHHHhHHHHHHHHHHHHhcCCCC
Q 012902 155 PAMNNILSKWVPVAERSRSLAL-VYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHSSP 227 (454)
Q Consensus 155 ~~~~~~i~~~~~~~~rg~~~~~-~~~~~~~g~~ig~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~ 227 (454)
+....++.|.+|++.|+...+. ++....+|.++++++.|++.+..|||..|.+.+++.++..++.++..++++
T Consensus 334 ~~~~~~~~~~~~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~~~G~~~~f~~~~~~~~i~~~~~~~~~~~~~ 407 (420)
T PRK09528 334 VGVFKYITLNFDVRLSATIYLVGFQFAKQLGAVFLSTLAGNLYDSIGFQGTYLILGGIVLLFTLISVFTLSGDR 407 (420)
T ss_pred HHHHHHHHHHcCccceeeeeeehHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 8888999999999988887665 677788999999999999999999999999988888777666666555533
No 127
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.62 E-value=1.5e-14 Score=137.72 Aligned_cols=152 Identities=13% Similarity=0.099 Sum_probs=127.1
Q ss_pred hcchh-hhhhcCCChhhHHHHHHHHHHHHHHhhhhhhhhhccccchHHHHHHHHHHHHHHhhhhhcccccHHHHHHHHHH
Q 012902 67 IAILP-MSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVF 145 (454)
Q Consensus 67 ~~~~~-i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~r~l 145 (454)
...|. +++++|.++.+.+++.+...++..++.++.|+++||+|||+.+..+.+...+........+ +.+.+++.+++
T Consensus 237 ~~~p~~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~~l 314 (393)
T PRK15011 237 INMPLFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKRFLMRVAAVAGVCFYAGMLMAH--SPAILLGLQLL 314 (393)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHh--hHHHHHHHHHH
Confidence 34454 5678899999999998888888889999999999999999988877766666555555666 78888889999
Q ss_pred HHhhcccchhhhhHHHhhhcCccchHHHHHHHHhhHHHHHHhHHhHHHHHhhccCcchhHHHHhHHHHHHHHHHHH
Q 012902 146 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLS 221 (454)
Q Consensus 146 ~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~ig~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~ 221 (454)
.+++.+...+....+..|.+| ++|+++.++++....+|..+|+.+++.+.+++||+..|++.+++.++..+..++
T Consensus 315 ~~~~~g~~~~~~~~~~~~~~p-~~~g~~~~~~~~~~~lg~~~g~~l~G~i~~~~g~~~~~~~~~~~~~~~~~~~~~ 389 (393)
T PRK15011 315 NAIYIGILGGIGMLYFQDLMP-GQAGSATTLYTNTSRVGWIIAGSLAGIVAEIWNYHAVFWFALVMIIATLFCLLR 389 (393)
T ss_pred HHHHHHHHHHHHHHHHHHhCC-CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHh
Confidence 988888777777888899997 569999999999999999999999999999999999999888777776555544
No 128
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.62 E-value=1.2e-14 Score=139.23 Aligned_cols=141 Identities=18% Similarity=0.182 Sum_probs=125.8
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhhccccchHHHHHHHHHHHHHHhhhhhcccccHHHHHHHHHHHHhhcccchhhhhHHHh
Q 012902 83 VGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILS 162 (454)
Q Consensus 83 ~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~ 162 (454)
.+.+.++..++..++.+..|+++||+|||+.+..+..+..++.+...+.+ +.+.+.+.+++.|++.+...+...+.+.
T Consensus 260 ~g~~~~~~~l~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 337 (408)
T PRK09874 260 SGMIASVPGVAALLSAPRLGKLGDRIGPEKILITALIFSVLLLIPMSFVQ--TPLQLGILRFLLGAADGALLPAVQTLLV 337 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHhc--cHHHHHHHHHHHHhhhHhhHHHHHHHHH
Confidence 46667777888899999999999999999999999988888888778788 8888889999999999999999999999
Q ss_pred hhcCccchHHHHHHHHhhHHHHHHhHHhHHHHHhhccCcchhHHHHhHHHHHHHHHHHHhcCC
Q 012902 163 KWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHS 225 (454)
Q Consensus 163 ~~~~~~~rg~~~~~~~~~~~~g~~ig~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~ 225 (454)
+..|+++||+.+++.+....+|..+||.++|.+.++.||++.|++.+++.++..+..++..++
T Consensus 338 ~~~~~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~~~~~~~ 400 (408)
T PRK09874 338 YNSSNQIAGRIFSYNQSFRDIGNVTGPLMGAAISANYGFRAVFLVTAGVVLFNAVYSWNSLRR 400 (408)
T ss_pred HhCCcccceeeehHHHHHHHHHHHhhHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999998888877766654444
No 129
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.62 E-value=1.4e-14 Score=138.48 Aligned_cols=155 Identities=18% Similarity=0.184 Sum_probs=131.7
Q ss_pred chhhhhhcCCChhhHHHHHHHHHHHHHHhhhhhhhhhccccchHHHHHHHHHHHHHHhhhhhcccccHHHHHHHHHHHHh
Q 012902 69 ILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMGI 148 (454)
Q Consensus 69 ~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~r~l~G~ 148 (454)
.|.+.++.|. ++.++..+.+.++..++.++.|++.||+|+|+.+..+..+.+++.++..+.+ +.+.+++.+++.|+
T Consensus 239 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~G~ 314 (399)
T PRK05122 239 ITLYYAARGW--DGAALALTLFGVAFVGARLLFGNLINRLGGLRVAIVSLLVEILGLLLLWLAP--SPWMALIGAALTGF 314 (399)
T ss_pred HHHHHHHccc--ccchHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhc--cHHHHHHHHHHHHH
Confidence 3444445554 3456777888999999999999999999999999999988888888888888 88888889999999
Q ss_pred hcccchhhhhHHHhhhcCccchHHHHHHHHhhHHHHHHhHHhHHHHHhhccCcchhHHHHhHHHHHHHHHHHHhcCCCC
Q 012902 149 GEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHSSP 227 (454)
Q Consensus 149 ~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~ig~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~ 227 (454)
+.+...+.....+.|.+|+++|+++.|+++....+|..+++++.+.+.++.||++.|++.+.+.++..+..+...++++
T Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (399)
T PRK05122 315 GFSLVFPALGVEAVKRVPPQNRGAALGAYSVFLDLSLGITGPLAGLVASWFGYPSIFLAAALAALLGLALTWLLYRRAP 393 (399)
T ss_pred hHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhccccc
Confidence 9998888888888999999999999999999999999999999999999999999999988888877666665444333
No 130
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.61 E-value=3e-14 Score=136.87 Aligned_cols=161 Identities=13% Similarity=0.038 Sum_probs=139.9
Q ss_pred hhcchhhhhh-cCCChhhHHHHHHHHHHHHHHhhhhhhhhhccccchHHHHHHHHHHHHHHhhhhhcccccHHHHHHHHH
Q 012902 66 SIAILPMSAE-FNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRV 144 (454)
Q Consensus 66 ~~~~~~i~~~-~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~r~ 144 (454)
....|.+.++ +|.++.+.|++.+...++..++.++.+++.||.++++.+..+.++.+++.++..+.+ +.+...++.+
T Consensus 243 ~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 320 (417)
T PRK10489 243 RVLYPALADEVWQMGAAQIGLLYAAVPLGAALGALTSGWLAHSARPGLLMLLSTLGSFLAVGLFGLMP--MWILAVLCLA 320 (417)
T ss_pred HHhhHHHHHhccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhccCcchHHHHHHHHHHHHHHHHHccc--hHHHHHHHHH
Confidence 3445665555 899999999999999999999999999999998888888888888888888888888 8888888899
Q ss_pred HHHhhcccchhhhhHHHhhhcCccchHHHHHHHHhhHHHHHHhHHhHHHHHhhccCcchhHHHHhHHHHHHHHHHHHhcC
Q 012902 145 FMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAH 224 (454)
Q Consensus 145 l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~ig~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~ 224 (454)
+.|++.+...+...+++.|..|+++||+++|++.....+|..+|+.+.|.+.+.+|++..++..+...++..++.....+
T Consensus 321 ~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 400 (417)
T PRK10489 321 LFGYLSAISSLLQYTLLQTQTPDEMLGRINGLWTAQNVTGDAIGAALLGGLGAMMTPVASASASGFGLLIIGVLLLLVLG 400 (417)
T ss_pred HHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHhcc
Confidence 99999887778888899999999999999999999999999999999999999999999999888877776666666666
Q ss_pred CCCC
Q 012902 225 SSPA 228 (454)
Q Consensus 225 ~~~~ 228 (454)
+.++
T Consensus 401 ~~~~ 404 (417)
T PRK10489 401 ELRR 404 (417)
T ss_pred cccc
Confidence 6443
No 131
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.59 E-value=4.5e-14 Score=135.22 Aligned_cols=154 Identities=15% Similarity=0.027 Sum_probs=129.0
Q ss_pred hcchhhhhhcCCChhhHHHHHHHHHHHHHHhhhhhhhhhccccchHHHHHHHHHHHHHHhhhhhcccccHHHHHHHHHHH
Q 012902 67 IAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFM 146 (454)
Q Consensus 67 ~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~r~l~ 146 (454)
...|.+.++.|.++.+.+.+.+.+.++..++.++.|+++||+|||+.+..+.+...++.++..+.+ +.+.+.+..++.
T Consensus 241 ~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 318 (406)
T PRK11551 241 NWLPSLLVGQGLSRSQAGLVQIAFNIGGALGSLLIGALMDRLRPRRVVLLIYAGILASLAALAAAP--SFAGMLLAGFAA 318 (406)
T ss_pred HHHHHHHHhCCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhcC--cHHHHHHHHHHH
Confidence 345777778899999999999999999999999999999999999999887777777777777777 777788888899
Q ss_pred HhhcccchhhhhHHHhhhcCccchHHHHHHHHhhHHHHHHhHHhHHHHHhhccC-cchhHHHHhHHHHHHHHHHHHh
Q 012902 147 GIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFG-WPSVFYSFGSLGTVWFTVWLSK 222 (454)
Q Consensus 147 G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~ig~~l~~~l~~~~g-wr~~f~~~~~~~~~~~~~~~~~ 222 (454)
|++.+...+...+++.|.+|+++|++.+|+.+....+|..+||.++|.+.++.+ |+..++......++..+..++.
T Consensus 319 g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (406)
T PRK11551 319 GLFVVGGQSVLYALAPLFYPTQVRGTGVGAAVAVGRLGSMAGPLLAGQLLALGRSTVGVIGASIPVILVAALAALLL 395 (406)
T ss_pred HHHHHhHHHHHHHHHHHHcchhhhhhhhhHHHHhhhHHHHHHhhhHhhhhccCCchHHHHHHHHHHHHHHHHHHHHH
Confidence 998888888889999999999999999999999999999999999999988654 5555665555555544444443
No 132
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.58 E-value=5.2e-14 Score=133.41 Aligned_cols=151 Identities=12% Similarity=0.035 Sum_probs=134.3
Q ss_pred hhhhcchhhhhhcCCChhhHHHHHHHHHHHHHHhhhhhhhhhccccchHHHHHHHHHHHHHHhhhhhcccccHHHHHHHH
Q 012902 64 NMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVR 143 (454)
Q Consensus 64 ~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~r 143 (454)
.+....|.+.+|+|.++.+.|++.+...++..++.++.+++.||+|+|+.+.++.+...+..++.++++ |.+.+++.+
T Consensus 223 ~~~~~~~~~l~~~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~q 300 (382)
T TIGR00902 223 AYYGFSAIYWQAAGISASATGLLWGIGVLAEIIIFAFSNKLFQNCSARDLLLISAIACVGRWAIIGAIE--AFPLIFLLQ 300 (382)
T ss_pred HHHHHHHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHHHHHHHHHHHHHHHHHHHHhHh--hHHHHHHHH
Confidence 333445665577999999999999999999999999999999999999999999999999999999999 999999999
Q ss_pred HHHHhhcccchhhhhHHHhhhcCccchHHHHHHHH-hhHHHHHHhHHhHHHHHhhccCcchhHHHHhHHHHHHHHH
Q 012902 144 VFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVY-SGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTV 218 (454)
Q Consensus 144 ~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~-~~~~~g~~ig~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~ 218 (454)
+++|+..+...+....++.+. |+++|++..++++ ...++|..+|+.++|.+.+++|+ ..|++.+.+.++..++
T Consensus 301 ~l~g~~~~~~~~~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~~~g~-~~~~~~~~~~~~~~~~ 374 (382)
T TIGR00902 301 ILHCGTFAVCHLAAMRYIAAQ-PGSEIAKLQALYNALAMGGLIAIFTAFAGFIYPTLGA-GTFVFMAIIAAAAFFL 374 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH-HHHHHHHHHHHHHHHH
Confidence 999999999999999999998 8999999999986 57789999999999999999986 6688878777765443
No 133
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.58 E-value=1.2e-13 Score=135.33 Aligned_cols=163 Identities=12% Similarity=0.122 Sum_probs=123.5
Q ss_pred hhhcchh-hhhhcCCChhhHHHHHHHHHHHHHHhhhhhhhhhccccchHHHHHHHHHHHHHHhh---hhhcccccHHHHH
Q 012902 65 MSIAILP-MSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATAL---TPVAAKLGLPFLL 140 (454)
Q Consensus 65 ~~~~~~~-i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~l---~~~~~~~~~~~l~ 140 (454)
.....|. +++++|.+..+.++..+...++..++.++.|+++||+|||+++..+.++..++... ...++ +...++
T Consensus 269 ~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 346 (490)
T PRK10642 269 LLTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSVALFVLAIPAFILINSN--VIGLIF 346 (490)
T ss_pred HHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhCC--CHHHHH
Confidence 3444565 45678988888888888899999999999999999999999988887654433322 22344 677788
Q ss_pred HHHHHHHhhcccchhhhhHHHhhhcCccchHHHHHHHHhhHHHHHHhHHhHHHHHhhcc-CcchhHHHHhHHHHHHHHHH
Q 012902 141 VVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRF-GWPSVFYSFGSLGTVWFTVW 219 (454)
Q Consensus 141 ~~r~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~ig~~l~~~l~~~~-gwr~~f~~~~~~~~~~~~~~ 219 (454)
+++++.|++.+........++.|.+|++.|+.++|.......++..++|.+.+++.+.. +|+.+++...+.+++..+..
T Consensus 347 ~~~~~~g~~~~~~~g~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g~~~p~i~g~l~~~~~~~~~~~~~~~~~~~i~~~~~ 426 (490)
T PRK10642 347 AGLLMLAVILNCFTGVMASTLPAMFPTHIRYSALAAAFNISVLVAGLTPTLAAWLVESTQNLMMPAYYLMVVAVIGLITG 426 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHH
Confidence 89999998877777777888999999999999999754445566788999999888754 47877777666666655544
Q ss_pred HHhcCCCCCCC
Q 012902 220 LSKAHSSPAED 230 (454)
Q Consensus 220 ~~~~~~~~~~~ 230 (454)
+ +.||+|++.
T Consensus 427 ~-~~pes~~~~ 436 (490)
T PRK10642 427 V-TMKETANRP 436 (490)
T ss_pred H-HhccccCCC
Confidence 4 468887653
No 134
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.57 E-value=8.7e-14 Score=130.35 Aligned_cols=160 Identities=26% Similarity=0.396 Sum_probs=143.7
Q ss_pred hhhchhhhhcchhhhhh-cCCChhhHHHHHHHHHHHHHHhhhhhhhhhccccchH-HHHHHHHHHHHHHhhhhhcccccH
Q 012902 59 VFGQVNMSIAILPMSAE-FNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKA-VLGFGVVWWSIATALTPVAAKLGL 136 (454)
Q Consensus 59 ~~~~~~~~~~~~~i~~~-~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~-~~~~~~~~~~~~~~l~~~~~~~~~ 136 (454)
...........|.+.++ +|.++.+.++..+...++..++.++.|++.||+|||+ .+..+..+..++.+.....+ +.
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~ 265 (352)
T cd06174 188 SFGYYGLLTYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRLGRRRLLLLIGLLLAALGLLLLALAP--SL 265 (352)
T ss_pred HhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhc--cH
Confidence 33444445556665555 4889999999999999999999999999999999999 99999999999999999998 88
Q ss_pred HHHHHHHHHHHhhcccchhhhhHHHhhhcCccchHHHHHHHHhhHHHHHHhHHhHHHHHhhccCcchhHHHHhHHHHHHH
Q 012902 137 PFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWF 216 (454)
Q Consensus 137 ~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~ig~~l~~~l~~~~gwr~~f~~~~~~~~~~~ 216 (454)
+.+.+..++.|++.+...+....++.|..|+|+|++.+|+.+....+|..+++.+.+.+.+..+|+..+++.+++.++..
T Consensus 266 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~~~~~~~~~~~~~~~~~i~~ 345 (352)
T cd06174 266 ALLLVALLLLGFGLGFAFPALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLLDTGGYGGVFLILAALALLAA 345 (352)
T ss_pred HHHHHHHHHHHHHHhccchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998888876
Q ss_pred HHHH
Q 012902 217 TVWL 220 (454)
Q Consensus 217 ~~~~ 220 (454)
+...
T Consensus 346 i~~~ 349 (352)
T cd06174 346 LLLL 349 (352)
T ss_pred HHhe
Confidence 5543
No 135
>PRK03545 putative arabinose transporter; Provisional
Probab=99.57 E-value=1.6e-13 Score=130.58 Aligned_cols=152 Identities=15% Similarity=0.054 Sum_probs=126.0
Q ss_pred chhhhhhcCCChhhHHHHHHHHHHHHHHhhhhhhhhhccccchHHHHHHHHHHHHHHh-hhhhcccccHHHHHHHHHHHH
Q 012902 69 ILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATA-LTPVAAKLGLPFLLVVRVFMG 147 (454)
Q Consensus 69 ~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~-l~~~~~~~~~~~l~~~r~l~G 147 (454)
.|.+.+++|.|..+.+++.+...++..+++++.|+++||+|||+... +..+..++.. +....+ +.+.+.+..++.|
T Consensus 229 ~~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~-~~~~~~~~~~~l~~~~~--~~~~~~~~~~l~g 305 (390)
T PRK03545 229 EPFVQQVAGLSENFATLLLLLFGGAGIIGSVLFSRLGNRHPSGFLLI-AIALLLVCLLLLLPAAN--SEWHLSVLSIFWG 305 (390)
T ss_pred HHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHH-HHHHHHHHHHHHHHHhc--hHHHHHHHHHHHH
Confidence 34466668999999999999999999999999999999999887544 4444444433 334566 7788888999999
Q ss_pred hhcccchhhhhHHHhhhcCccchHHHHHHHHhhHHHHHHhHHhHHHHHhhccCcchhHHHHhHHHHHHHHHHHHhcC
Q 012902 148 IGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAH 224 (454)
Q Consensus 148 ~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~ig~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~ 224 (454)
++.+...+.....+.|..| ++|++++|+++....+|..+||.++|.+.+++|++..|++.+.+.++..+......+
T Consensus 306 ~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~G~~~~G~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 381 (390)
T PRK03545 306 IAIMCIGLAMQVKVLKLAP-DATDVAMALFSGIFNIGIGAGALLGNQVSLHLGLSSIGYVGAALALAALVWSILIFR 381 (390)
T ss_pred HHHhcchHHHHHHHHHhCC-CcHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChhHHHHHHHHHHHHHHHHHHHHcc
Confidence 9988777878888888875 689999999999999999999999999999999999999999888887776666554
No 136
>PRK12382 putative transporter; Provisional
Probab=99.57 E-value=7.4e-14 Score=133.07 Aligned_cols=152 Identities=20% Similarity=0.196 Sum_probs=130.8
Q ss_pred cchhhhhhcCCChhhHHHHHHHHHHHHHHhhhhhhhhhccccchHHHHHHHHHHHHHHhhhhhcccccHHHHHHHHHHHH
Q 012902 68 AILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMG 147 (454)
Q Consensus 68 ~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~r~l~G 147 (454)
..|.+.++.+.+ +.++..+.+.++..+++++.|++.||+|+|+.+..+..+.+++.++..+.+ +.+.+++..++.|
T Consensus 238 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~g 313 (392)
T PRK12382 238 FVSLYFASKGWA--MAGFTLTAFGGAFVLMRVLFGWMPDRFGGVKVAIVSLLVETVGLLLLWLAP--TAWVALAGAALTG 313 (392)
T ss_pred HHHHHHHhcCCc--hhHHHHHHHHHHHHHHHHHHHHHHHhcCCCeehHHHHHHHHHHHHHHHHcc--cHHHHHHHHHHHH
Confidence 334444555554 356667778888899999999999999999999999999999988888888 8888888999999
Q ss_pred hhcccchhhhhHHHhhhcCccchHHHHHHHHhhHHHHHHhHHhHHHHHhhccCcchhHHHHhHHHHHHHHHHHHhc
Q 012902 148 IGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKA 223 (454)
Q Consensus 148 ~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~ig~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~ 223 (454)
++.+...+...+.+.|.+|+|+||++.|+.+....+|..+||.+.+.+.++.||+..|.+.+.+.++..++.++..
T Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 389 (392)
T PRK12382 314 AGCSLIFPALGVEVVKRVPSQVRGTALGGYAAFQDIAYGVSGPLAGMLATSFGYPSVFLAGAISAVLGIIVTILSF 389 (392)
T ss_pred HHHHhHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHhhc
Confidence 9998888888888999999999999999999999999999999999999999999999999988877766655543
No 137
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.55 E-value=1.4e-13 Score=130.47 Aligned_cols=147 Identities=12% Similarity=0.072 Sum_probs=126.8
Q ss_pred hhhhcCCChhhHHHHHHHHHHHHHHhhhhhhhhhccccchHHHHHHHHHHHHHHhhhhhcccccHHHHHHHHHHHHhhcc
Q 012902 72 MSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMGIGEG 151 (454)
Q Consensus 72 i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~r~l~G~~~g 151 (454)
+.+++|.++.+.+++.+.......++.++.|++.||+|||+.+..+.++..+......+.+ +.+.+.+.+++.|++.+
T Consensus 226 ~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~g~~~g 303 (375)
T TIGR00899 226 IIHELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRFGKRRLMLLAALAGVAFYTGLAADN--SLWALLMLQLLNAIFIG 303 (375)
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHH
Confidence 5678899999999998888888888999999999999999999888877666666666667 78888888999999988
Q ss_pred cchhhhhHHHhhhcCccchHHHHHHHHhhHHHHHHhHHhHHHHHhhccCcchhHHHHhHHHHHHHHHHHH
Q 012902 152 VAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLS 221 (454)
Q Consensus 152 ~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~ig~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~ 221 (454)
...+....++.|..| ++++++.++++....+|..++|.+++.+.+..||+..|++.++..++..+...+
T Consensus 304 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~g~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 372 (375)
T TIGR00899 304 ILAGIGMLYFQDLMP-GRAGAATTLYTNTGRVGWIIAGSVGGILAERWSYHAVYWFAIVMLIVALFCLLL 372 (375)
T ss_pred HHHHHHHHHHHHhCc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHhe
Confidence 888888899999986 467799999999999999999999999999999999999988887776555433
No 138
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.55 E-value=1.2e-13 Score=138.54 Aligned_cols=140 Identities=11% Similarity=0.041 Sum_probs=121.0
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhccccchHHHHHHHHHHHHHHhhhhhcccccHHHHHHHHHHHHhhcccchhhhhHHHhh
Q 012902 84 GLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSK 163 (454)
Q Consensus 84 g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~ 163 (454)
.+...+..++..++.++.|+++||+|||+++..+.++.+++.++.++++ +...+++.+++.|++.+..++...++++|
T Consensus 598 ~~~~~l~~l~~i~G~il~g~L~Dr~GRr~~l~~~~~lsai~~ll~~~~~--s~~~ll~~~~l~g~~~~~~~~~~~a~~aE 675 (742)
T TIGR01299 598 YFVNFLGTLAVLPGNIVSALLMDKIGRLRMLAGSMVLSCISCFFLSFGN--SESAMIALLCLFGGLSIAAWNALDVLTVE 675 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHc--cHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445677789999999999999999999999999999999999999998 88888888999999888889999999999
Q ss_pred hcCccchHHHHHHHHhhHHHHHHhHHhHHHHHhhccCcchhHHHHhHHHHHHHHHHHHhcCCCC
Q 012902 164 WVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHSSP 227 (454)
Q Consensus 164 ~~~~~~rg~~~~~~~~~~~~g~~ig~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~ 227 (454)
++|.++|++++|+.+....+|.++||.+++.+.+. +...+|++.+++.++..++.+ .+||+.
T Consensus 676 l~Pt~~Rgta~Gi~~~~~rlGaiigp~i~g~L~~~-~~~~pf~i~a~~lll~~ll~~-~LPET~ 737 (742)
T TIGR01299 676 LYPSDKRATAFGFLNALCKAAAVLGILIFGSFVGI-TKAAPILFASAALACGGLLAL-KLPDTR 737 (742)
T ss_pred HcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hhHHHHHHHHHHHHHHHHHHH-hCCCCc
Confidence 99999999999999999999999999999988764 456778887777776655554 457644
No 139
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.54 E-value=2.3e-13 Score=133.89 Aligned_cols=149 Identities=12% Similarity=0.130 Sum_probs=118.2
Q ss_pred hhcchhhh-hhcCCChhhHHHHHHHHHHHHHHhhhhhhhhhccccchHHHHHHHHHHHHHHhhhhhcccccHHHHHHHHH
Q 012902 66 SIAILPMS-AEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRV 144 (454)
Q Consensus 66 ~~~~~~i~-~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~r~ 144 (454)
...+|.+. +++|.+..+.+++.+...++..++.++.|+++||+|||+++..+..+..+..++.......+.+.+.+..+
T Consensus 295 ~~~lp~~l~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (496)
T PRK03893 295 QALLPTYLKTDLGYDPHTVANVLFFSGFGAAVGCCVGGFLGDWLGTRKAYVCSLLISQLLIIPVFAIGGANVWVLGLLLF 374 (496)
T ss_pred HHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhhccccHHHHHHHHHH
Confidence 34566655 68999999999999999999999999999999999999998888777666655444333114444555555
Q ss_pred HHHhhcccchhhhhHHHhhhcCccchHHHHHHHHhhHHHHHHhHHhHHHHHhhccCcchhHHHHhHHHHH
Q 012902 145 FMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTV 214 (454)
Q Consensus 145 l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~ig~~l~~~l~~~~gwr~~f~~~~~~~~~ 214 (454)
+.+.......+...+++.|.+|+++|++.+|+......+|..+||.++|.+.+++||+..+...+....+
T Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~lgp~l~g~l~~~~g~~~~~~~~~~~~~~ 444 (496)
T PRK03893 375 FQQMLGQGISGLLPKLIGGYFDTEQRAAGLGFTYNVGALGGALAPILGALIAQRLDLGTALASLSFSLTF 444 (496)
T ss_pred HHHHHhcccchhhHHHHHhhCCHHHhhcccchhhhhhhHHHHHHHHHHHHHhccCChHHHHHHHHHHHHH
Confidence 5554444455677788999999999999999999999999999999999999999999888766554433
No 140
>PRK10054 putative transporter; Provisional
Probab=99.53 E-value=6.3e-13 Score=126.42 Aligned_cols=174 Identities=13% Similarity=0.069 Sum_probs=124.0
Q ss_pred CcchHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCcccchhhHhHHHHHHHHHHHHHHHHHhhhhhhcCccchhhHHHHH
Q 012902 262 KPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQ 341 (454)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~ 341 (454)
+|+++.+.+..++...+......++|.|+++++|+++.++|+..+...+..+++++..|+++||+|+|+....
T Consensus 6 ~~~~~~l~~~~~~~~~g~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~~------- 78 (395)
T PRK10054 6 RRSTSALLASSLLLTIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRYMLL------- 78 (395)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHH-------
Confidence 4567778888888888999999999999998899999999999999999999999999999999999953321
Q ss_pred HHHHHHHHHHHHHhhccChhHHHHHHHHHHHhhhhhhcchhhhh-hcccccccchhHHHHHHHHHHHHHHHHHHHHHHHh
Q 012902 342 SIGFLGPAFFLTQLSHVDSPAMAVLCMACSQGTDAFSQSGLYSN-HQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYIL 420 (454)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~ 420 (454)
+..............++.+.................+..... .+..++++|+++.|+.+...++|..++|.+.+.+.
T Consensus 79 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~ 156 (395)
T PRK10054 79 --AITAFASGFIAIPLVNNVTLVVLFFALINCAYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLV 156 (395)
T ss_pred --HHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 111111111122222333333322222222222223333333 45566788999999999999999999999999988
Q ss_pred ccCCchhHHHHHHHHHHHHHHHHHH
Q 012902 421 QHGSWDDVFKVSVGLYLVGTAVWNL 445 (454)
Q Consensus 421 ~~~g~~~~~~~~~~~~~~~~~~~~~ 445 (454)
+ .+|+..|++.+++.+++.+...+
T Consensus 157 ~-~g~~~~f~~~~~~~~i~~i~~~~ 180 (395)
T PRK10054 157 M-QSINLPFWLAAICSAFPLVFIQI 180 (395)
T ss_pred H-hccCcHHHHHHHHHHHHHHHHHH
Confidence 6 68999999888877776554433
No 141
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.53 E-value=2.8e-13 Score=128.45 Aligned_cols=149 Identities=15% Similarity=0.135 Sum_probs=125.1
Q ss_pred cchhhhhhcCCChhhHHHHHHHHHHHHHHhhhhhhhhhccccchHHHHHHHHHHHHHHhhhhhcccccHHHHHHHHHHHH
Q 012902 68 AILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMG 147 (454)
Q Consensus 68 ~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~r~l~G 147 (454)
.+|.+.++.|.++++.+++.+...++..+++++.|++.||+|+|+++..+..+.+++.+... + +. ......++.|
T Consensus 222 ~lp~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~--~--~~-~~~~~~~l~g 296 (381)
T PRK03633 222 LMPLYLNHQGMSDASIGFWMALLVSAGILGQWPIGRLADRFGRLLVLRVQVFVVILGSIAML--S--QA-AMAPALFILG 296 (381)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHcCcHHHHHHHHHHHHHHHHHHh--h--hH-HHHHHHHHHH
Confidence 45666677899999999999999999999999999999999999999888888777765443 3 22 3345677888
Q ss_pred hhcccchhhhhHHHhhhcCccchHHHHHHHHhhHHHHHHhHHhHHHHHhhccCcchhHHHHhHHHHHHHHHHHH
Q 012902 148 IGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLS 221 (454)
Q Consensus 148 ~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~ig~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~ 221 (454)
++.....|...+.+.|..|+++++...+......++|..+||.++|.+.+++||++.|.+.+.+.++..+..++
T Consensus 297 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~igp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~~~ 370 (381)
T PRK03633 297 AAGFTLYPVAMAWACEKVEHHELVAMNQALLLSYTVGSLLGPSFTAMLMQNYSDNLLFIMIASVSFIYLLMLLR 370 (381)
T ss_pred HHHHhHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHh
Confidence 87777889999999999988888888889888999999999999999999999999999988888766544444
No 142
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.52 E-value=6.4e-13 Score=126.38 Aligned_cols=163 Identities=13% Similarity=0.017 Sum_probs=129.4
Q ss_pred hhhhcchhhhhhcCCChhhHHHHHHHHHHHHHHhhhhhhhhhccccchHHHHHHHHHHHHHHhhhhhcccccHHHHHHHH
Q 012902 64 NMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVR 143 (454)
Q Consensus 64 ~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~r 143 (454)
......|.+.+++|.+..+.|...+.+.++..++.++.|++.||+|||+.+..+..+..++..+....+. +...+ .-
T Consensus 223 ~~~~~lp~~l~~~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~~~--~~ 299 (393)
T PRK09705 223 SLIAWLPAFYIEIGASAQYSGSLLALMTLGQAAGALLMPAMARHQDRRKLLMLALVLQLVGFCGFIWLPL-QLPVL--WA 299 (393)
T ss_pred HHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHccc-hHHHH--HH
Confidence 3444556655678999999999999999999999999999999999999998888887777665544331 22222 23
Q ss_pred HHHHhhcccchhhhhHHHhhhcC-ccchHHHHHHHHhhHHHHHHhHHhHHHHHhhccC-cchhHHHHhHHHHHHHHHHHH
Q 012902 144 VFMGIGEGVAMPAMNNILSKWVP-VAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFG-WPSVFYSFGSLGTVWFTVWLS 221 (454)
Q Consensus 144 ~l~G~~~g~~~~~~~~~i~~~~~-~~~rg~~~~~~~~~~~~g~~ig~~l~~~l~~~~g-wr~~f~~~~~~~~~~~~~~~~ 221 (454)
++.|++.+...+.......|..+ +++|++..|+.+....++..++|.+.+++.+..| |+..|++.+..+++..+....
T Consensus 300 ~l~g~g~g~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 379 (393)
T PRK09705 300 MVCGLGLGGAFPLCLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRSISGNYLMDWAFHALCVVGLMIITLR 379 (393)
T ss_pred HHHHHhccchHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHH
Confidence 46788888888887777777775 5789999999999999999999999999999876 888888888777777666677
Q ss_pred hcCCCCCC
Q 012902 222 KAHSSPAE 229 (454)
Q Consensus 222 ~~~~~~~~ 229 (454)
+.||++++
T Consensus 380 ~~~~~~~~ 387 (393)
T PRK09705 380 FAPARFPQ 387 (393)
T ss_pred hccccccc
Confidence 77775543
No 143
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.52 E-value=2.9e-13 Score=131.89 Aligned_cols=154 Identities=14% Similarity=0.044 Sum_probs=118.7
Q ss_pred hhhcchh-hhhhcCCChhhHHHHHHHHHHHHHHhhhhhhhhhccccchHHHHHHHHHHHHHHhh--hhhcccccHHHHHH
Q 012902 65 MSIAILP-MSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATAL--TPVAAKLGLPFLLV 141 (454)
Q Consensus 65 ~~~~~~~-i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~l--~~~~~~~~~~~l~~ 141 (454)
.....|. +++++|.|..+.++..+...++..++.+++|+++||+|||+.+.....+..++..+ ....+ +.+...+
T Consensus 277 ~~~~~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 354 (467)
T PRK09556 277 IDNWSPVYAFQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLANGRRALVACIALALIIFTLGVYQHAT--SEYMYLA 354 (467)
T ss_pred HHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHHHHhcC--cHHHHHH
Confidence 4444564 56789999999999999999999999999999999999998876654444433322 23344 6666778
Q ss_pred HHHHHHhhcccchhhhhHHHhhhcCccchHHHHHHHHhhHHH-HHHhHHhHHHHHhh------------ccCcchhHHHH
Q 012902 142 VRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYL-GSVTGLAFSPFLIH------------RFGWPSVFYSF 208 (454)
Q Consensus 142 ~r~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~-g~~ig~~l~~~l~~------------~~gwr~~f~~~ 208 (454)
.+++.|++.............|.+|+++||.+.|+.+....+ |..++|.+.|.+.+ ..||+..|++.
T Consensus 355 ~~~~~G~~~~~~~~~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G~i~~~~~~g~~~~~~~~~~~~~~f~~~ 434 (467)
T PRK09556 355 SLFALGFLVFGPQLLIGVAAVGFVPKKAIGVANGIKGTFAYLFGDSFAKVGLGMIADPTKNGTPIFGYTLTGWAGTFAAL 434 (467)
T ss_pred HHHHHHHHHhhHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhHHHHhhhHHHHhcccccccccccccccChHHHHHHH
Confidence 888888654433333346677999999999999999988886 77999999999999 57899999988
Q ss_pred hHHHHHHHHHHH
Q 012902 209 GSLGTVWFTVWL 220 (454)
Q Consensus 209 ~~~~~~~~~~~~ 220 (454)
++..++..+..+
T Consensus 435 ~~~~~~~~~~~~ 446 (467)
T PRK09556 435 DIAAIGCICLMA 446 (467)
T ss_pred HHHHHHHHHHHH
Confidence 777766554444
No 144
>PRK03699 putative transporter; Provisional
Probab=99.52 E-value=2.7e-13 Score=129.19 Aligned_cols=155 Identities=11% Similarity=0.114 Sum_probs=129.5
Q ss_pred hhhhcchhh-hhhcCCChhhHHHHHHHHHHHHHHhhhhhhhhhccccchHHHHHHHHHHHHHHhhhhhcccccHHHHHHH
Q 012902 64 NMSIAILPM-SAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVV 142 (454)
Q Consensus 64 ~~~~~~~~i-~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~ 142 (454)
......|.+ ++++|.|..+.+++.+.+.++..++.++.|+++||+|||+.+.....+..+...+....+ +.+.+.+.
T Consensus 223 ~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~ 300 (394)
T PRK03699 223 TFISWVPEYAQKKFGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFFDLQRILTVLAGLALVLMYLFVNTD--DPSHLLYA 300 (394)
T ss_pred HHHHHHHHHHHHHcCCChHHhhHHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHcC--CchHHHHH
Confidence 334455654 467899999999999999999999999999999999999998888877777777776777 77777778
Q ss_pred HHHHHhhcccchhhhhHHHhhhcCccchHHHHHHHHhhHHHHHHhHHhHHHHHhhccCcchhHHHHhHHHHHHHHHHHH
Q 012902 143 RVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLS 221 (454)
Q Consensus 143 r~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~ig~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~ 221 (454)
.++.|++.+..++...++..|..| +++++..+.......+|..++|.+.+.+.+..||+..+++.+++.++..+....
T Consensus 301 ~~~~G~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~p~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 378 (394)
T PRK03699 301 ILGLGFFSSAIYTTIITLGSQQTK-VASPKLVNFILTCGTIGTMLTFVVTSPIVAHFGLQAALLTANGLYAVVFVMCIL 378 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcc-CCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHhCchhhhhhhHHHHHHHHHHHHH
Confidence 889999888888888888888775 557788899989999999999999999999999999999888877776554333
No 145
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.52 E-value=1.3e-13 Score=133.61 Aligned_cols=152 Identities=15% Similarity=0.174 Sum_probs=126.0
Q ss_pred hhhhcchhhhhhcCCChhhHHHHHHHHHHHHHHhhhhhhhhhccc--cchHHHHH--HHHHHHHHHhhhhhcccccHHHH
Q 012902 64 NMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTV--GGKAVLGF--GVVWWSIATALTPVAAKLGLPFL 139 (454)
Q Consensus 64 ~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~--Grr~~~~~--~~~~~~~~~~l~~~~~~~~~~~l 139 (454)
.....+|.+.+++|.+..+.+++.++..++..+++++.|+++||. ++|+.... +.++.+++.+++...+ +++.+
T Consensus 259 ~~~~~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~--~~~~~ 336 (455)
T TIGR00892 259 APIIFLVPYAKDKGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLFNGLTHLLCALAG--DYTGL 336 (455)
T ss_pred chHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHHHHHHHHHHHHhc--hHHHH
Confidence 334455666678899999999999999999999999999999983 34433333 3444455556667777 88889
Q ss_pred HHHHHHHHhhcccchhhhhHHHhhhcCccchHHHHHHHHhhHHHHHHhHHhHHHHHhhcc-CcchhHHHHhHHHHHHHH
Q 012902 140 LVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRF-GWPSVFYSFGSLGTVWFT 217 (454)
Q Consensus 140 ~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~ig~~l~~~l~~~~-gwr~~f~~~~~~~~~~~~ 217 (454)
++.+++.|++.+...+...+++.|.+|++++++.+|+++....+|..+||.++|.+.+.. +|++.|++.+++.++..+
T Consensus 337 ~i~~~~~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~~f~~~~~~~li~~~ 415 (455)
T TIGR00892 337 VIYCIFFGLSFGSVGALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLAGRLVDATKNYKYIFYASGSIVVSAGL 415 (455)
T ss_pred HHHHHHHHHHhchHHHHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHccccceeeeehhcCCcchHHHHhhHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999877 599999998877666544
No 146
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.51 E-value=4.4e-13 Score=131.23 Aligned_cols=168 Identities=13% Similarity=0.089 Sum_probs=130.0
Q ss_pred hhchhhhhcchhhhhhcCCChhhHHHHHHHHHHHHHHhhhhhhhhhccccchHHHHHHHHHHHHHHhhhhh---cccc--
Q 012902 60 FGQVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPV---AAKL-- 134 (454)
Q Consensus 60 ~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~l~~~---~~~~-- 134 (454)
..........|.+.+++|.+..+.++......++..++.++.|+++||+|||+.+..+.++.+++.++.++ ....
T Consensus 298 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 377 (481)
T TIGR00879 298 TGINAIMYYSPTIFENAGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRFGRRPLLLIGAAGMAICLFVLGILGASFVTGS 377 (481)
T ss_pred hCCeehHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHhhcccCCc
Confidence 33334455567788889999988899999999999999999999999999999999998888887777652 1110
Q ss_pred ----cHHHHHHHHHHHHhhcccchhhhhHHHhhhcCccchHHHHHHHHhhHHHHHHhHHhHHHHHhhccCcchhHHHHhH
Q 012902 135 ----GLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGS 210 (454)
Q Consensus 135 ----~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~ig~~l~~~l~~~~gwr~~f~~~~~ 210 (454)
+...+....+..+.......+....++.|.+|+++|++++++.+....+|.+++|.+.+.+.++.+|++.|++.++
T Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~~~~~~~~~~~~~~~~~f~~~~~ 457 (481)
T TIGR00879 378 SKSSGNVAIVFILLFIAFFAMGWGPVPWVIVSEIFPLSLRPKGISIAVAANWLANFIVGFLFPTMLESIGVGGVFIFFGG 457 (481)
T ss_pred ccchhHHHHHHHHHHHHHHHccccCeehhhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccceehhHHH
Confidence 1222222333333322334466677889999999999999999999999999999999999998999999999998
Q ss_pred HHHHHHHHHHHhcCCCC
Q 012902 211 LGTVWFTVWLSKAHSSP 227 (454)
Q Consensus 211 ~~~~~~~~~~~~~~~~~ 227 (454)
++++..+...+..||.+
T Consensus 458 ~~~~~~i~~~~~~~~~~ 474 (481)
T TIGR00879 458 LNVLGLIFVYFFLPETK 474 (481)
T ss_pred HHHHHHHHHheecccCC
Confidence 88887777766666543
No 147
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.50 E-value=7.8e-12 Score=122.08 Aligned_cols=152 Identities=14% Similarity=0.153 Sum_probs=121.0
Q ss_pred chhhhhhcCCChhhHHHHHH-HHHHHHHHhhhhhhhhhccccchHHHHHHHHHHHHHHhhh---hhc-ccccHHHHHHHH
Q 012902 69 ILPMSAEFNWNPATVGLIQS-SFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALT---PVA-AKLGLPFLLVVR 143 (454)
Q Consensus 69 ~~~i~~~~~~s~~~~g~~~s-~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~l~---~~~-~~~~~~~l~~~r 143 (454)
.|.+.+++|.|..+.+++.. ...++..++.++.|+++||+|+|+.+..+.++.+++.+.. +.. + +.+.+...-
T Consensus 246 ~~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~~l~i~~~l~~l~~l~~~~l~~~~~--~~~~l~~~~ 323 (491)
T PRK11010 246 TTFLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRLSLFRALMIFGILQGVSNAGYWLLSITDK--NLYSMGAAV 323 (491)
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccc--cHHHHHHHH
Confidence 34556779999999999975 6668999999999999999999998776666555544322 333 3 555555566
Q ss_pred HHHHhhcccchhhhhHHHhhhcCccchHHHHHHHHhhHHHHHHhHHhHHHHHhhccCcchhHHHHhHHHHHHHHHHHHh
Q 012902 144 VFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSK 222 (454)
Q Consensus 144 ~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~ig~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~ 222 (454)
+++.+..|...+...++..+..+++.++...++.+...++|..+++++.|.+.+..||+..|.+.++++++..+.....
T Consensus 324 ~l~~~~~g~~~~~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~~~~~~G~l~~~~G~~~~f~~~~~~~l~~l~~~~~~ 402 (491)
T PRK11010 324 FFENLCGGMGTAAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPVAGWFVEAHGWPTFYLFSVAAAVPGLLLLLVC 402 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHH
Confidence 6666666666677788999999999999999999999999999999999999999999999999888888876665554
No 148
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.48 E-value=2.3e-12 Score=117.91 Aligned_cols=176 Identities=14% Similarity=0.166 Sum_probs=142.7
Q ss_pred HHHHHHHHHHHHHHhhhchhhhhcchhhhhhcCCChhhHHHHHHHHHHHHHHhhhhhhhhhccccchHHHHHHHHHHHHH
Q 012902 45 IISLCVGNFEQIFIVFGQVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIA 124 (454)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~ 124 (454)
+........+ ........+..+-|.+++..|.|.+.++++.-.|.++..+|+.+.|++.|| +.|+.+.....+.++.
T Consensus 213 v~~~l~~t~l--~~~g~F~~ftYi~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr-~~~~~l~~~~~l~a~~ 289 (394)
T COG2814 213 VLLGLLATFL--FMTGHFALYTYIRPFLESVAGFSVSAVSLVLLAFGIAGFIGNLLGGRLADR-GPRRALIAALLLLALA 289 (394)
T ss_pred HHHHHHHHHH--HHcchhhhHHhHHHHHHHccCCCHhHHHHHHHHHHHHHHHHHHHHhhhccc-cchhHHHHHHHHHHHH
Confidence 3333333444 344555667777888999999999999999999999999999999999999 9999999888888777
Q ss_pred HhhhhhcccccHHHHHHHHHHHHhhcccchhhhhHHHhhhcCccchHHHHHHHHhhHHHHHHhHHhHHHHHhhccCcchh
Q 012902 125 TALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSV 204 (454)
Q Consensus 125 ~~l~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~ig~~l~~~l~~~~gwr~~ 204 (454)
.+...+..+ +.+..++.-++.|+.........+..+++ ..||.++.+.+++....++|..+|..++|.+.+++|+...
T Consensus 290 ~l~l~~~~~-~~~~~~~~~~~wg~a~~~~~~~~~~~~a~-~~p~~~~~a~sl~~aa~nlgia~GA~lGG~v~~~~g~~~~ 367 (394)
T COG2814 290 LLALTFTGA-SPALALALLFLWGFAFSPALQGLQTRLAR-LAPDAADLAGSLNVAAFNLGIALGAALGGLVLDALGYAAT 367 (394)
T ss_pred HHHHHHhcc-hHHHHHHHHHHHHHHhhhhhhHHHHHhcc-cCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHH
Confidence 777766652 45666677777888877666666666777 3368999999999999999999999999999999999999
Q ss_pred HHHHhHHHHHHHHHHHHhcCC
Q 012902 205 FYSFGSLGTVWFTVWLSKAHS 225 (454)
Q Consensus 205 f~~~~~~~~~~~~~~~~~~~~ 225 (454)
.++.+++.++...+.+...+.
T Consensus 368 ~~~~a~l~~~a~~~~~~~~~~ 388 (394)
T COG2814 368 GWVGAALLLLALLLALLSARK 388 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHhc
Confidence 999999888887766654443
No 149
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.48 E-value=1.9e-13 Score=130.31 Aligned_cols=153 Identities=13% Similarity=0.141 Sum_probs=119.2
Q ss_pred hchhhhhcchhh-hhhcCCChhhHHHHHHHHHHHHHHhhhhhhhhhccccchHHHHHHHHHHHHHH--hhhhhcccccHH
Q 012902 61 GQVNMSIAILPM-SAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIAT--ALTPVAAKLGLP 137 (454)
Q Consensus 61 ~~~~~~~~~~~i-~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~--~l~~~~~~~~~~ 137 (454)
.........|.+ ++++|.++.+.+.+.+...++..++.++.|+++||+|||+.+..+..+..+.. ....+....+.+
T Consensus 234 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (394)
T TIGR00883 234 TFYLITTYLPTYLTQTLGLSANSALLVLMLSLILFFITIPLSGALSDRIGRRPVLIIFTVLAALLAVPLLMALLDSGSFT 313 (394)
T ss_pred HHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhcCCchH
Confidence 333444455664 47789999999999999999999999999999999999998775554443332 222222111567
Q ss_pred HHHHHHHHHHhhcccchhhhhHHHhhhcCccchHHHHHH-HHhhHHHHHHhHHhHHHHHhhccC-cchhHHHHhHHHH
Q 012902 138 FLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLAL-VYSGMYLGSVTGLAFSPFLIHRFG-WPSVFYSFGSLGT 213 (454)
Q Consensus 138 ~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~-~~~~~~~g~~ig~~l~~~l~~~~g-wr~~f~~~~~~~~ 213 (454)
.+....++.|++.+...+...+++.|.+|+++|+++.++ .+....+|..++|.+++.+.++.| |++.++......+
T Consensus 314 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~g~l~~~~g~~~~~~~~~~~~~l 391 (394)
T TIGR00883 314 LFFFLVLGLALIGGMYTGPMGSFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYIAAALVAMTGDWYAIGYYLAALAL 391 (394)
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHHhCCccceeeEeeehhHhHHHHHhhHHHHHHHHHHHHcCcchhHHHHHHHHHH
Confidence 777888999999888999999999999999999999998 456667899999999999999888 8888777665444
No 150
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.48 E-value=1.9e-12 Score=123.71 Aligned_cols=155 Identities=17% Similarity=0.216 Sum_probs=122.0
Q ss_pred hhhhhcchhhhhhcCCChhhHHHHHHHHHHHHHHhhhhhhhhhccccchHHHH-HHHHHHHHHHhhhhh-----cccccH
Q 012902 63 VNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLG-FGVVWWSIATALTPV-----AAKLGL 136 (454)
Q Consensus 63 ~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~-~~~~~~~~~~~l~~~-----~~~~~~ 136 (454)
.......|.+.+++|.+..+.+++.+...++..++.+..|+++||+|||+.+. .+.+..+++.+.+.+ .+ +.
T Consensus 239 ~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~--~~ 316 (402)
T TIGR00897 239 FGFAVFLPMFVAELGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDKLGWMNTVRWFGGVGCGIFTLALYYIPQHFGH--SF 316 (402)
T ss_pred HHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHccCC--cH
Confidence 33444567777889999999999999999999999999999999999988764 333333333333322 23 56
Q ss_pred HHHHHHHHHHHhhcccchhhhhHHHhhhcCccchHHHHHHHHhhHHHHHHhHHhHHHHHhhccCcchhHHHHhHHHHHHH
Q 012902 137 PFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWF 216 (454)
Q Consensus 137 ~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~ig~~l~~~l~~~~gwr~~f~~~~~~~~~~~ 216 (454)
+.+.+..++.|++.+...+ ....+.|.. +++|++++|+.+....+|..++|.+++.+.+..||+..|++.+++.++..
T Consensus 317 ~~~~~~~~~~G~~~~~~~~-~~~~~~~~~-~~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~g~~~~~~~~a~~~~i~~ 394 (402)
T TIGR00897 317 AVALIIAIALGIFLAGYVP-LAAVFPTLA-PKHKGAAMSVLNLSAGLSAFLAPAIAVLFIGFFGAIGVVWIFAALYVVSA 394 (402)
T ss_pred HHHHHHHHHHHHHHHHHHH-HHHHHHhhC-cchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHH
Confidence 7777889999998876544 456677765 56899999999999999999999999999999999999999988877766
Q ss_pred HHHHH
Q 012902 217 TVWLS 221 (454)
Q Consensus 217 ~~~~~ 221 (454)
++..+
T Consensus 395 ~~~~~ 399 (402)
T TIGR00897 395 FLTAF 399 (402)
T ss_pred HHHHH
Confidence 65554
No 151
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.47 E-value=3.2e-12 Score=122.43 Aligned_cols=176 Identities=12% Similarity=0.160 Sum_probs=122.5
Q ss_pred CcchHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCcccchhhHhHHHHHHHHHHHHHHHHHhhhh-hhcCccchhhHHHH
Q 012902 262 KPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTL-VSKGLSVTTVRKIM 340 (454)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-~~~~~~~~~~~~~~ 340 (454)
.+.++..+.......+.+++...++|.|+++.+|+++.+++.+...+.....++.+++|+++||+ ||||...
T Consensus 8 p~~l~~l~~~~~~e~fs~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~il------- 80 (493)
T PRK15462 8 PRAIYYVVALQIWEYFSFYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVM------- 80 (493)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHH-------
Confidence 34566777777888889999999999999998999999999999999999999999999999999 9885322
Q ss_pred HHHHHHHHHHHHHHhhccChhHHHHHHHHHHHhhhhhhcchhhhhhcc-cccc--cchhHHHHHHHHHHHHHHHHHHHHH
Q 012902 341 QSIGFLGPAFFLTQLSHVDSPAMAVLCMACSQGTDAFSQSGLYSNHQD-IAPR--YSGVLLGLSNTAGVLAGVFGTAATG 417 (454)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~g~~~~~~~~g~~~~~~~~g 417 (454)
........+...................+...+.+ ...+.......+ .+++ +|.++.++.+...++|+.++|.+.|
T Consensus 81 iG~il~~lg~lll~~~~~~~~~~~l~l~li~iG~G-~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g 159 (493)
T PRK15462 81 LGALLMAIGHVVLGASEIHPSFLYLSLAIIVCGYG-LFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACG 159 (493)
T ss_pred HHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHhcc-cccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHH
Confidence 22222111111111111111222222222222222 222333334444 4443 6999999999999999999999999
Q ss_pred HHhccCCchhHHHHHHHHHHHHHHHHHH
Q 012902 418 YILQHGSWDDVFKVSVGLYLVGTAVWNL 445 (454)
Q Consensus 418 ~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 445 (454)
++.+..||+..|...++.++++.+.+..
T Consensus 160 ~L~~~~Gw~~~F~iaaigm~l~li~~~~ 187 (493)
T PRK15462 160 YAQEEYSWAMGFGLAAVGMIAGLVIFLC 187 (493)
T ss_pred HHHhhhChHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999887777666665544
No 152
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.46 E-value=2e-12 Score=122.63 Aligned_cols=146 Identities=16% Similarity=0.099 Sum_probs=124.9
Q ss_pred cchhhhhhcCCChhhHHHHHHHHHHHHHHhhhhhhhhhccccchHHHHHHHHHHHHHHhhhhhcccccHHHHHHHHHHHH
Q 012902 68 AILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMG 147 (454)
Q Consensus 68 ~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~r~l~G 147 (454)
..|.+.+|.|.++.+.|.+.+...++..+..++.|++.||+|+|+.+..+.+..+++.++.+.++ +.+.+++..++.|
T Consensus 227 ~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~g 304 (382)
T PRK11128 227 FSAIYWQAAGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRWSARDLLLLSAICGVVRWGLMGSTT--ALPWLIVIQILHC 304 (382)
T ss_pred HHHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhh--hHHHHHHHHHHHH
Confidence 33555567899999999999999999999999999999999999999999999999888888888 8999999999999
Q ss_pred hhcccchhhhhHHHhhhcCccchHHHHHHHH-hhHHHHHHhHHhHHHHHhhccCcchhHHHHhHHHHHHHH
Q 012902 148 IGEGVAMPAMNNILSKWVPVAERSRSLALVY-SGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFT 217 (454)
Q Consensus 148 ~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~-~~~~~g~~ig~~l~~~l~~~~gwr~~f~~~~~~~~~~~~ 217 (454)
++.+...+....++.+. +++++++..+..+ ...++|..+||.++|.+.|.+|+ ..|+..+.+.++.+.
T Consensus 305 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l~~~~g~-~~~~~~~~~~~~~~~ 373 (382)
T PRK11128 305 GTFTVCHLAAMRYIAAR-PGSEVIRLQALYSALAMGGSIAIMTVLSGFLYQHLGA-GVFWVMALVALPALF 373 (382)
T ss_pred HHHHHHHHHHHHHHHHC-CHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH-HHHHHHHHHHHHHHH
Confidence 99998889999998887 5677799999886 55678889999999999999887 467766666655433
No 153
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.46 E-value=5.7e-12 Score=120.11 Aligned_cols=171 Identities=18% Similarity=0.234 Sum_probs=121.8
Q ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCcccchhhHhHHHHHHHHHHHHHHHHHhhhhhhcCccchhhHHHHHHHHH
Q 012902 266 WALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGF 345 (454)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~ 345 (454)
+.+....++...+.+....++|.|++++.|.|+.+.|+......+...+.+++.|+++||+++|+... . +.
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~-------~--~~ 83 (400)
T PRK11646 13 YFLLIDNMLVVLGFFVVFPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMIV-------T--GM 83 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHHHH-------H--HH
Confidence 45667778888888888999999998889999999999999999999999999999999999985332 1 22
Q ss_pred HHHHHHHHHhhccChhHH-HHHHHHHHHhhhhhhcchhhhhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHhccCC
Q 012902 346 LGPAFFLTQLSHVDSPAM-AVLCMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGS 424 (454)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g 424 (454)
.............++.+. .....+.+.+.+...++......+..++++|+++.|+.+...++|..+||.+.|.+. ..+
T Consensus 84 ~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~-~~g 162 (400)
T PRK11646 84 LMRAAGFATMAIAHEPWLLWLSCILSGLGGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLL-QYD 162 (400)
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-Hhh
Confidence 222222222222233333 333333343333223333333445567789999999999999999999999999998 678
Q ss_pred chhHHHHHHHHHHHHHHHHHHh
Q 012902 425 WDDVFKVSVGLYLVGTAVWNLF 446 (454)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~~~~~ 446 (454)
|+..|++.++..++..++..+.
T Consensus 163 ~~~~f~~~~~~~~~~~i~~~~~ 184 (400)
T PRK11646 163 FRLVCATGAVLFVLAAAFNAWL 184 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHh
Confidence 9999998887776665544443
No 154
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.46 E-value=7.9e-12 Score=122.17 Aligned_cols=177 Identities=16% Similarity=0.174 Sum_probs=118.4
Q ss_pred hhcCc-chHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCcccchhhHhHHHHHHHHHHHHHHHHHhhh-hhhcCccchhh
Q 012902 259 ILSKP-PVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADT-LVSKGLSVTTV 336 (454)
Q Consensus 259 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~~~~~~~~~~~ 336 (454)
.+|+| .++..+...++..++++....++|.|+++.+|++..+++.....+........+++|+++|| +|||+...
T Consensus 16 ~~~~p~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~--- 92 (500)
T PRK09584 16 AFKQPKAFYLIFSIELWERFGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIM--- 92 (500)
T ss_pred hhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHH---
Confidence 44666 48888888899999999999999999999899999998888777665656666789999999 59984322
Q ss_pred HHHHHHHHHHHHHHHHHHhhccChhHHHHHHHHHHHhhhhhhcchhhhhh-cccccc--cchhHHHHHHHHHHHHHHHHH
Q 012902 337 RKIMQSIGFLGPAFFLTQLSHVDSPAMAVLCMACSQGTDAFSQSGLYSNH-QDIAPR--YSGVLLGLSNTAGVLAGVFGT 413 (454)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~g~~~~~~~~g~~~~~ 413 (454)
........+...................+.+.+.+.. .+...... +..+++ +++.+.++.+...++|..++|
T Consensus 93 ----~g~~~~~ig~~l~~~~~~~~~~l~~~~~l~gig~g~~-~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp 167 (500)
T PRK09584 93 ----LGAIVLAIGYALVAWSGHDAGIVYMGMATIAVGNGLF-KANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSM 167 (500)
T ss_pred ----HHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhhhcc-cCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHHH
Confidence 2222222121111111111122222223333333333 33433333 334433 355678888999999999999
Q ss_pred HHHHHHhccCCchhHHHHHHHHHHHHHHHH
Q 012902 414 AATGYILQHGSWDDVFKVSVGLYLVGTAVW 443 (454)
Q Consensus 414 ~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~ 443 (454)
.+.|++.|+.||+..|.+.++...++.+.+
T Consensus 168 ~i~g~l~~~~g~~~~F~i~~i~~~i~~i~~ 197 (500)
T PRK09584 168 LATPWLAAKYGWSVAFALSVVGMLITVVNF 197 (500)
T ss_pred HHHHHHHHhhCHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999998887666655443
No 155
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.45 E-value=1.5e-12 Score=124.09 Aligned_cols=160 Identities=15% Similarity=0.040 Sum_probs=118.6
Q ss_pred Hhhhchhhhhcchh-hhhhcCCChhhHHHHHHHHHHHHHHhhhhhhhhhccccchH--HH------HHHHHHHHHHHhhh
Q 012902 58 IVFGQVNMSIAILP-MSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKA--VL------GFGVVWWSIATALT 128 (454)
Q Consensus 58 ~~~~~~~~~~~~~~-i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~--~~------~~~~~~~~~~~~l~ 128 (454)
............|. +.+++|.+..+.+++.+...++..++.++.|++.||+|||+ .. ..+.++..+.....
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (399)
T TIGR00893 227 VNIGLGFFLTWFPTYLVQERGLSILEAGFMASLPGIVGFIGMILGGRLSDLLLRRGKSLVFARKTAIIAGLVLSLLMFAT 306 (399)
T ss_pred HHhHHHHHHHHHHHHHHHHhcccHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHh
Confidence 33333444445555 55678999999999999999999999999999999999996 11 11111122222222
Q ss_pred hhcccccHHHHHHHHHHHHhhcccchhhhhHHHhhhcCccchHHHHHHHHhhHHHHHHhHHhHHHHHhhccC-cchhHHH
Q 012902 129 PVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFG-WPSVFYS 207 (454)
Q Consensus 129 ~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~ig~~l~~~l~~~~g-wr~~f~~ 207 (454)
...+ +.+.......+.+.+.+ ..+...+++.|.+|+++|++++|+.+....+|..++|.+.+.+.+..| |+..|++
T Consensus 307 ~~~~--~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~i~g~l~~~~g~~~~~~~~ 383 (399)
T TIGR00893 307 NYVN--IPYAALALVALGFFGLG-AGAIGWALISDNAPGNIAGLTGGLINSLGNLGGIVGPIVIGAIAATTGSFAGALMV 383 (399)
T ss_pred ccch--hHHHHHHHHHHHHhchh-hhhHHHHHHHhhcChhHHHHHHHHHHHHHHHhhhhhhHHhhhhccCCCchhHHHHH
Confidence 2233 44444444455555544 788999999999999999999999999999999999999999999988 9999999
Q ss_pred HhHHHHHHHHHHH
Q 012902 208 FGSLGTVWFTVWL 220 (454)
Q Consensus 208 ~~~~~~~~~~~~~ 220 (454)
.++..++..+..+
T Consensus 384 ~~~~~~~~~~~~~ 396 (399)
T TIGR00893 384 VAALALIGALSYL 396 (399)
T ss_pred HHHHHHHHHHHHH
Confidence 8887777655544
No 156
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.45 E-value=5e-12 Score=121.97 Aligned_cols=170 Identities=14% Similarity=0.064 Sum_probs=116.5
Q ss_pred chHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCcccchhhHhHHHHHHHHHHHHHHHHHhhhhhhcCccchhhHHHHHHH
Q 012902 264 PVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSI 343 (454)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~ 343 (454)
.+....+..++.++.......++|.+.++ +|.|+.+.+++.+...++..++++..|++.||+|+|+... +
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~~---------~ 93 (434)
T PRK11663 24 ILITMYLGYALFYFTRKSFNAAMPEMLAD-LGLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNARYFMG---------I 93 (434)
T ss_pred HHHHHHHHHHHHHHhhhhHHHhhHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCchhHH---------H
Confidence 34444555555555556677888888877 8999999999999999999999999999999999995432 2
Q ss_pred HHHHHHHHHHHhhccChhHHHHHH-HHHHHhhhhhhcchhhhhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 012902 344 GFLGPAFFLTQLSHVDSPAMAVLC-MACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQH 422 (454)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~ 422 (454)
+.+............++.+..... ++.+.+.+...........+..++++|++++|+.+...++|..++|.+.+.+.+.
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~ 173 (434)
T PRK11663 94 GLIATGIINILFGFSSSLWAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAIALH 173 (434)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 222222222222223333333322 2333333333333333334445567899999999999999999999999999999
Q ss_pred CCchhHHHHHHHHHHHHHHHH
Q 012902 423 GSWDDVFKVSVGLYLVGTAVW 443 (454)
Q Consensus 423 ~g~~~~~~~~~~~~~~~~~~~ 443 (454)
.||+..|.+.++..++..+..
T Consensus 174 ~gw~~~f~~~~i~~~~~~~~~ 194 (434)
T PRK11663 174 YGWRYGMMIAGIIAIVVGLFL 194 (434)
T ss_pred ccHHHHHHHHHHHHHHHHHHH
Confidence 999999998887665544433
No 157
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.45 E-value=1.9e-12 Score=123.92 Aligned_cols=139 Identities=16% Similarity=0.195 Sum_probs=116.6
Q ss_pred cchh-hhhhcCCChhhHHHHHHHHHHHHHHhhhhhhhhhccccchHHHHHHHHHHHHHHh-hhhhcccccHHHHHHHHHH
Q 012902 68 AILP-MSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATA-LTPVAAKLGLPFLLVVRVF 145 (454)
Q Consensus 68 ~~~~-i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~-l~~~~~~~~~~~l~~~r~l 145 (454)
..|. +.+++|.+..+.+++.+...++..++.++.|++.||+|||+.+..+..+.++... +....+ +.+.+.+..++
T Consensus 260 ~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 337 (405)
T TIGR00891 260 LLPTYLKADLGLSPHTVANIVVFSNIGAIVGGCVFGFLGDWLGRRKAYVCSLLAGQLLIIPVFAIGA--NVAVLGLGLFF 337 (405)
T ss_pred hhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchhhhHHHHHHHHHHHHHHHHhCC--chHHHHHHHHH
Confidence 3444 5667899999999999999999999999999999999999998888776533332 333445 66777777788
Q ss_pred HHhhcccchhhhhHHHhhhcCccchHHHHHHHHhhHHHHHHhHHhHHHHHhhccC-cchhHHHH
Q 012902 146 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFG-WPSVFYSF 208 (454)
Q Consensus 146 ~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~ig~~l~~~l~~~~g-wr~~f~~~ 208 (454)
.|+..+...+....++.|.+|+++|++++|+.+....+|..++|+++|.+.++.| |+..+...
T Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~~~g~~~~~~~~~ 401 (405)
T TIGR00891 338 QQMLVQGIWGILPKHLGEYFPTDQRAAGLGFTYQLGNLGGALAPIIGALLAQRLDEYGTALASL 401 (405)
T ss_pred HHHHHccchhhHHHHHhhhCCcchhHHHhhHHHHHHHHHHHHHHHHHHHHHHhccccchhHHhh
Confidence 8887777788888999999999999999999999999999999999999999988 88766653
No 158
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=99.45 E-value=5.7e-10 Score=102.80 Aligned_cols=333 Identities=10% Similarity=0.058 Sum_probs=217.5
Q ss_pred hhcchhhhhh-cCCChhhHH-HHHHHHHHHHHHhhhhhhhhhccccchHHHHHHHHHHHHHHhhhhhcccccHHHHHHHH
Q 012902 66 SIAILPMSAE-FNWNPATVG-LIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVR 143 (454)
Q Consensus 66 ~~~~~~i~~~-~~~s~~~~g-~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~r 143 (454)
+...|.+.+. .|++..|+. -+.-...-.+....++...++|..|.|++++++.+...+...+.-+.+ +.+.+-+..
T Consensus 24 Pfl~~yL~~~~kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l~Ykpviil~~~~~i~t~~lll~~~--sv~~mq~~q 101 (412)
T PF01770_consen 24 PFLTPYLTGPDKNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYLRYKPVIILQALSYIITWLLLLFGT--SVLAMQLMQ 101 (412)
T ss_pred ccchHHHcCCccCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHC--cHHHHHHHH
Confidence 3445555554 788888874 455566777788888999999999999999999999999999999999 999999999
Q ss_pred HHHHhhcccchhhhhHHHhhhcCccchHHHHHHHHhhHHHHHHhHHhHHHHHhhc--cCcchhHHHHhHHHHHHHHHHHH
Q 012902 144 VFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHR--FGWPSVFYSFGSLGTVWFTVWLS 221 (454)
Q Consensus 144 ~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~ig~~l~~~l~~~--~gwr~~f~~~~~~~~~~~~~~~~ 221 (454)
+..|++.+. ..+..+++-...|+++-.++.+...++.-+|..++..+|..+.+. .+++...++......+. +++.+
T Consensus 102 ~~yg~~~a~-evay~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs~~~~sy~~L~~isl~~~~~a-~~~~~ 179 (412)
T PF01770_consen 102 FFYGLATAA-EVAYYSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVSFGGVSYFQLNYISLASVSLA-LLIAL 179 (412)
T ss_pred HHHHHHHHH-HHHHHHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHH-HHHHH
Confidence 999999775 677889998888999999999999999999999999999988763 34455555544333333 33334
Q ss_pred hcCCCCCCC---CCCC------hhhhhhhhh--cc----ccCCCCC-----------CcchhHhhcCcchHHHHHHHHHH
Q 012902 222 KAHSSPAED---PQLR------PAEKKLIVS--SC----ASKEPVK-----------TIPWGLILSKPPVWALIVSHFCH 275 (454)
Q Consensus 222 ~~~~~~~~~---~~~~------~~~~~~~~~--~~----~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~ 275 (454)
++|..++.. ++.. +.+.+...+ +. +++++.. ...+++..++|.++...+-+.+.
T Consensus 180 fLP~~~~S~~f~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~y~~~~ll~WSlWWa~a 259 (412)
T PF01770_consen 180 FLPMPKRSLFFHRKPPAEQDANESESDKMNESPESSSSTEKSPSTESSSRKSVLRLLWKDFKSCYSNPRLLLWSLWWAFA 259 (412)
T ss_pred HcCCCCcccceeccCccccccccccccccccccccccccccCcccccchHHHHHHHHHHHHHHHhcCchHHHHHHHHHHH
Confidence 455543211 1000 000000000 00 0000000 12345567899998888888888
Q ss_pred HHHHHHHHhhHHHHHHHH--hCCcccchhhHhHHHHHHHHHHHHHHHHHhhhhhhcCccchhhHHHHHHHHHHHHHHHHH
Q 012902 276 NWGTFILLTWMPTYYNQV--LHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLT 353 (454)
Q Consensus 276 ~~~~~~~~~~~~~~l~~~--~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (454)
..+++.+..+....-++. -+-+...-|.+-+...+.+.++.+..|++-.++.+. ....+....+..+..+.
T Consensus 260 tcgy~qv~nYvQ~LW~~v~~~~~~~vYNG~VeA~~tllgA~~al~~g~v~~~w~~~-------~~l~l~~~S~l~a~~L~ 332 (412)
T PF01770_consen 260 TCGYYQVINYVQSLWDTVPPSDNESVYNGAVEAASTLLGAIAALLAGYVKVNWDRW-------GELALGVFSLLQAGLLF 332 (412)
T ss_pred HhHHHHHHHHHHHHHHhcCCCCCCcccchHHHHHHHHHHHHHHHHHhHhhcchHHH-------HHHHHHHHHHHHHHHHH
Confidence 888888877777666664 133334457777888888888888889885555554 22333333333344444
Q ss_pred HhhccChhHHHHHHHHH-HHhhhhhhcchhhhhhcccccccchhHHHHHHHHHHHHH
Q 012902 354 QLSHVDSPAMAVLCMAC-SQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAG 409 (454)
Q Consensus 354 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~ 409 (454)
.....++.+......++ ...............+..+..|.-|...|+.....-+-.
T Consensus 333 lm~~t~~Iwv~Y~~yIif~~~y~fliTiA~~qIA~~l~~e~yaLVFGiNtf~Al~LQ 389 (412)
T PF01770_consen 333 LMSFTGNIWVCYAGYIIFRSLYMFLITIASFQIAKNLSEERYALVFGINTFVALVLQ 389 (412)
T ss_pred HHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccceeeeeeeHHHHHHHHH
Confidence 44455555554444444 333333343444445566667788888888665544433
No 159
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.45 E-value=4.9e-12 Score=122.73 Aligned_cols=154 Identities=15% Similarity=0.166 Sum_probs=138.4
Q ss_pred hhhcchhhh-hhcCCChhhHHHHHHHHHHHHHHhhhhhhhhhccccchHHHHHHHHHHHHHHhhhhhcccccHHHHHHHH
Q 012902 65 MSIAILPMS-AEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVR 143 (454)
Q Consensus 65 ~~~~~~~i~-~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~r 143 (454)
+...+|.+. +++|.++...|++.+++.+|..+++++.+++.+|+++++.+..+.++++++.+..++++ +.+..++.-
T Consensus 237 ~~aLlPl~a~~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~~~~~lv~~~~~~~a~~~~~lal~~--~~~~~~~~l 314 (524)
T PF05977_consen 237 VWALLPLFARDVLGGGASGYGLLLAAFGVGAILGALLLPRLRRRLSSRRLVLLASLLFALALLLLALSP--SFWLALIAL 314 (524)
T ss_pred HHHhhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhhHHHHHHHHHHHHHHhcch--HHHHHHHHH
Confidence 344577754 56899999999999999999999999999999999999999999999999999999999 999999999
Q ss_pred HHHHhhcccchhhhhHHHhhhcCccchHHHHHHHHhhHHHHHHhHHhHHHHHhhccCcchhHHHHhHHHHHHHHHHH
Q 012902 144 VFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWL 220 (454)
Q Consensus 144 ~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~ig~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~ 220 (454)
++.|++.....+...+.+.+..|++.|||.++++......+..+|..+.|.+.+.+|.+..+.+.++..++..++..
T Consensus 315 ~l~G~~~~~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~g~~~lGsll~G~la~~~g~~~al~~a~~~lll~~~~~~ 391 (524)
T PF05977_consen 315 FLAGAAWIIANSSLNTLVQLSVPDWVRGRVFSIYQMVFFGGMPLGSLLWGFLADHFGVRTALLIAGAALLLSALIAL 391 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHH
Confidence 99999999888889999999999999999999999999999999999999999999999999887766555544443
No 160
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.44 E-value=6.4e-12 Score=122.06 Aligned_cols=175 Identities=12% Similarity=0.073 Sum_probs=123.8
Q ss_pred cchHHHHHHHHHHHHHHHHHHhhHHHHHHHH--hCCcccchhhHhHHHHHHHHHHHHHHHHHhhh-hhhcCccchhhHHH
Q 012902 263 PPVWALIVSHFCHNWGTFILLTWMPTYYNQV--LHFNLTESGLFCVLPWLTMAFSANLGGWIADT-LVSKGLSVTTVRKI 339 (454)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~~~~~~~~~~~~~~ 339 (454)
+.++.+.+..++..+++++...++|.|+++. +|++..+++.....+.+...++++.+|+++|| +|||+...
T Consensus 10 ~~~~~l~~~~~~~~~~~~~~~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~------ 83 (475)
T TIGR00924 10 KPLFTLFFVELWERFSYYGMQGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMV------ 83 (475)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHH------
Confidence 3455666777777899999999999999987 89999999999999999999999999999999 79994322
Q ss_pred HHHHHHHHHHHHHHHhhccChhH-HHHHHHHHHHhhhhhhcchhhhh-hcccccc---cchhHHHHHHHHHHHHHHHHHH
Q 012902 340 MQSIGFLGPAFFLTQLSHVDSPA-MAVLCMACSQGTDAFSQSGLYSN-HQDIAPR---YSGVLLGLSNTAGVLAGVFGTA 414 (454)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~---~~~~~~g~~~~~~~~g~~~~~~ 414 (454)
.+.....+........++.. ......+.+.+.+ ...+..... .+..+++ +|+++.++.+...++|..+||.
T Consensus 84 ---~~~~~~~~g~~~~~~~~~~~~~~~~~~l~g~g~g-~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~ 159 (475)
T TIGR00924 84 ---LGGIVLMLGHFMLAMSIYPDLIFYGLGTIAVGSG-LFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPL 159 (475)
T ss_pred ---HHHHHHHHHHHHHHhcccHhHHHHHHHHHHhccc-cccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHH
Confidence 22222222222222223332 2333333333333 333344333 3334443 4888999999999999999999
Q ss_pred HHHHHhccCCchhHHHHHHHHHHHHHHHHHHhc
Q 012902 415 ATGYILQHGSWDDVFKVSVGLYLVGTAVWNLFS 447 (454)
Q Consensus 415 ~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 447 (454)
+.+.+.++.||+..|...++..+++.+.+...+
T Consensus 160 l~g~l~~~~g~~~~f~~~~~~~~~~~l~~~~~~ 192 (475)
T TIGR00924 160 LAGVIAENYGYHVGFNLAAVGMVIGLLTFFAGR 192 (475)
T ss_pred HHHHHHHhcChHHHHHHHHHHHHHHHHHHHHcc
Confidence 999999998999999998877666655544433
No 161
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.44 E-value=3.8e-12 Score=124.72 Aligned_cols=163 Identities=13% Similarity=0.052 Sum_probs=124.5
Q ss_pred hhhcchhhhhhcCCChhhHHHHHHHHHHHHHHhhhhhhhhhccccchHHHHHHHHHHHHHHhhhhhccccc-HH-HHHHH
Q 012902 65 MSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLG-LP-FLLVV 142 (454)
Q Consensus 65 ~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~l~~~~~~~~-~~-~l~~~ 142 (454)
.....|.+.++.|.+....++......+...++.++.|+++||+|||+.++.+.++.+++.++++.....+ .+ ....+
T Consensus 290 ~~~~~p~i~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~i~~~~~~~v~~~~l~~~~~~~~~~~~~~~~ 369 (479)
T PRK10077 290 VLYYAPEIFKTLGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQAPGIVALLS 369 (479)
T ss_pred HHHHHHHHHHHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhHHHHHHHHHHHHHHHhcCcccHHHHHH
Confidence 34455778888998887777888888889999999999999999999999999999888887765432101 11 22334
Q ss_pred HHHHHhhccc-chhhhhHHHhhhcCccchHHHHHHHHhhHHHHHHhHHhHHHHH------hhccCcchhHHHHhHHHHHH
Q 012902 143 RVFMGIGEGV-AMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFL------IHRFGWPSVFYSFGSLGTVW 215 (454)
Q Consensus 143 r~l~G~~~g~-~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~ig~~l~~~l------~~~~gwr~~f~~~~~~~~~~ 215 (454)
-++.+.+.+. ..|....+++|.+|+++|++++|+......+|..+++.+.+.+ .+.++|++.|++.++++++.
T Consensus 370 ~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 449 (479)
T PRK10077 370 MLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWIANYFVSWTFPMMDKNSWLVAHFHNGFSYWIYGCMGVLA 449 (479)
T ss_pred HHHHHHHHhccccchhHHHhHhhCChhHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccchhhhccCccHHHHHHHHHHHH
Confidence 4444444443 3467789999999999999999999999999999886665544 45789999999998888887
Q ss_pred HHHHHHhcCCCC
Q 012902 216 FTVWLSKAHSSP 227 (454)
Q Consensus 216 ~~~~~~~~~~~~ 227 (454)
.++.+.+.||++
T Consensus 450 ~~~~~~~~~e~~ 461 (479)
T PRK10077 450 ALFMWKFVPETK 461 (479)
T ss_pred HHHHHhccccCC
Confidence 777666666654
No 162
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.43 E-value=2.7e-12 Score=120.97 Aligned_cols=133 Identities=17% Similarity=0.236 Sum_probs=119.5
Q ss_pred hcchhhhhh-cCCChhhHHHHHHHHHHHHHHhhhhhhhhhccccchHHHHHHHHHHHHHHhhhhhcccccHHHHHHHHHH
Q 012902 67 IAILPMSAE-FNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVF 145 (454)
Q Consensus 67 ~~~~~i~~~-~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~r~l 145 (454)
...|.+.++ +|.++.+.+++.+...++..++.++.+++.||+|||+.+..+..+.+++..+..+.+. +.+.+.+..++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 310 (365)
T TIGR00900 232 ALFPYVQSKYLGRGSTHYGWVLAAFGLGALLGALLLGLLGRYFKRMALMTGAIFVIGLAILVVGLTPP-NFPLFLVLWFA 310 (365)
T ss_pred HHhHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHhhch-hHHHHHHHHHH
Confidence 456776554 8999999999999999999999999999999999999999888888888888887772 28888899999
Q ss_pred HHhhcccchhhhhHHHhhhcCccchHHHHHHHHhhHHHHHHhHHhHHHHHhhccC
Q 012902 146 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFG 200 (454)
Q Consensus 146 ~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~ig~~l~~~l~~~~g 200 (454)
.|++.+...+...+++.|.+|+|+|++..|+.+....+|..++|.++|.+.+++|
T Consensus 311 ~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~g~l~~~~g 365 (365)
T TIGR00900 311 IGVGYGPINVPQGTLLQRRVPAELLGRVFGAQFSLSHAAWPLGLILAGPLADHLG 365 (365)
T ss_pred HHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 9999999999999999999999999999999999999999999999999988654
No 163
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=99.43 E-value=1e-11 Score=113.05 Aligned_cols=387 Identities=15% Similarity=0.086 Sum_probs=219.7
Q ss_pred HHHHHHHHHHHHHHHHhhhchhhhhcchhhhhhcCCChhhHHHHHHHHHHHHHHhhhhhhhhhcc----ccchHH-HHHH
Q 012902 43 KQIISLCVGNFEQIFIVFGQVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADT----VGGKAV-LGFG 117 (454)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr----~Grr~~-~~~~ 117 (454)
++.+.+..+++. ..+.+..-....+++.+++|++....+.+--+.-+...+.+|+.|..+|| |||||. +..+
T Consensus 32 ~~li~v~~ia~G---vqf~wA~elsy~tPyl~~lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~ 108 (498)
T KOG0637|consen 32 RKLISVASIAAG---VQFGWALELSYLTPYLQSLGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAG 108 (498)
T ss_pred HHHHHHHHHHHH---HHHHHHHHhccccHHHHHcCCCcccccccccccccccceecccccccccccccccccccchHHHh
Confidence 444444444444 44455555556788888999999999999999999999999999999996 898877 5556
Q ss_pred HHHHHHHHhhhhhcccccH-----------------HHHHHHHHHHHhhcccchhhhhHHHhhhcCccchHH-HHHHHHh
Q 012902 118 VVWWSIATALTPVAAKLGL-----------------PFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSR-SLALVYS 179 (454)
Q Consensus 118 ~~~~~~~~~l~~~~~~~~~-----------------~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~rg~-~~~~~~~ 179 (454)
.+..+++.++.+++. ++ ..++++--+.=++.-....++-++++|...++++.+ +.+.+..
T Consensus 109 s~~i~~~l~Lig~aa--Dig~~lgd~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans~f~~ 186 (498)
T KOG0637|consen 109 SLLIAVSLFLIGYAA--DIGLLLGDNERKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTRANSVFSF 186 (498)
T ss_pred hHHHHHHHhhhhhHh--hhhHHhcCCcccccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccchhHHH
Confidence 677788888887765 22 334444455555666788889999999997776666 9999999
Q ss_pred hHHHHHHhHHhHHHHHhhccCcch--hHHHHhHHHHHHHHHHHHhc-------CCC------CCCCCCCChhhhhhhhhc
Q 012902 180 GMYLGSVTGLAFSPFLIHRFGWPS--VFYSFGSLGTVWFTVWLSKA-------HSS------PAEDPQLRPAEKKLIVSS 244 (454)
Q Consensus 180 ~~~~g~~ig~~l~~~l~~~~gwr~--~f~~~~~~~~~~~~~~~~~~-------~~~------~~~~~~~~~~~~~~~~~~ 244 (454)
..++|.++|..++++ .+|+- +|.......+.+..+-..+. .++ +++++...+.+. ...
T Consensus 187 f~avGnvLGY~~g~y----~~~~~~~~Ft~~~~~~~~C~~~~~~~~~~v~L~~i~~~~~l~~~~~~~~s~~~~~---~~~ 259 (498)
T KOG0637|consen 187 FMAVGNVLGYALGSY----LGLYKIFPFTLTTACDLYCANLKLCFFLEVTLLLIETSESLWYPQEKPLSPKGTT---ARS 259 (498)
T ss_pred HHHhcceeeeecccc----cCceEEeehHHHHHHHHHHHHHHHHHHHhhhhhheecccccccccccCCCCCccc---ccc
Confidence 999999999988874 34432 23322222222222111111 111 001100000000 000
Q ss_pred cccCCCCCCcchhHh-hcCcchHHHHHHHHHHHHHHHHHHhhHHHHHHH-HhCCcccch----------------hhHhH
Q 012902 245 CASKEPVKTIPWGLI-LSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQ-VLHFNLTES----------------GLFCV 306 (454)
Q Consensus 245 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~g~s~~~~----------------~~~~~ 306 (454)
...+.+........+ ...|..+.+++...+.+++.+.+..|...++-+ .++-+|... .+=+.
T Consensus 260 ~~~~~~~~~e~fG~~~~mpr~m~~L~i~~lltW~a~f~f~LF~TDfmG~~vy~GDp~a~~~S~a~~~Y~~GV~~G~~GL~ 339 (498)
T KOG0637|consen 260 KSSKLPFLLEIFGALKVMPRPMRMLLIVTLLTWIAWFPFLLFDTDFMGREVYGGDPKADENSEAKKLYNAGVRMGCLGLM 339 (498)
T ss_pred cccCcchHHHHhchHhhCChhHHHHHHHHHHHHHHHHHHHHHHHHhcchHhhCCCCCCCcchhHHHHHHhccccchHHHH
Confidence 000001000111112 235678899999999999999999888888755 344443221 23455
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhcCccchhhHHHHHHHHHHHHHHHHHHhhcc--------Chh--HHHHHHHHHHHhh--
Q 012902 307 LPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHV--------DSP--AMAVLCMACSQGT-- 374 (454)
Q Consensus 307 ~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~--~~~~~~~~~~~~~-- 374 (454)
++.+...+.+....++.||+|-|+.+..+.....+..++.+..........+ ... ....+...+..-.
T Consensus 340 ins~~lgi~S~~~~~l~~~~g~r~~y~~~~~~f~~~~~~~gl~~~~~~~~~~~~~~G~~~~~~~~~p~~l~~~y~~~g~~ 419 (498)
T KOG0637|consen 340 LNSIVLGIYSLLVEKLSRKFGTRKRYWGGVNAFGLATGLAGLVLNTYVVLSHRSTAGILSSPLLTVPYGALALYAILGIP 419 (498)
T ss_pred HHHHHHHHHHHHHHHHHHhcCcceEEeehhHHHHHHHHHHhhhhhHHHHHHHHhhcceeecchhcccHHHHHHHHHhCCc
Confidence 6667777788889999999997766665543233333332221111110000 000 0000000000000
Q ss_pred hhhhcchhhhhhc-cccc--ccchhHHHHHHHHHHHHHHHHHHHHHHHhccCCch--hHHHHHHHHHHHHHH
Q 012902 375 DAFSQSGLYSNHQ-DIAP--RYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWD--DVFKVSVGLYLVGTA 441 (454)
Q Consensus 375 ~~~~~~~~~~~~~-~~~~--~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~--~~~~~~~~~~~~~~~ 441 (454)
........+...+ +..+ .-+|...|+.|..-.+...+.....|.+.|..|-. .++...+...+++.+
T Consensus 420 ~a~t~~~pf~~~s~~~~~sg~g~G~~~gvln~~I~ipQvivs~~~Gp~~~~~G~~~~~~~~~~a~s~~~~~i 491 (498)
T KOG0637|consen 420 LAITFSIPFALASIEIGNSGLGQGLDLGVLNCAIVIPQVLVSLGLGPLDQLFGGGNLPAFVSGAVALLIGGI 491 (498)
T ss_pred cccccccccccccccccCccCCCCceeeeeeeeeeehhheeeccccchhhhcCCcchhHHHHHHHHHHHHHH
Confidence 0001111122221 1112 23578888888888888888888888888884433 333333333334433
No 164
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.43 E-value=4.4e-12 Score=122.31 Aligned_cols=142 Identities=13% Similarity=0.069 Sum_probs=107.2
Q ss_pred hhcchhhhhhcCCChhhHHHHHHHHHHHHHHhhhhhhhhhccccchHHHHHHHHHHHHHHhhhhhcccccHHHHHHHHHH
Q 012902 66 SIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVF 145 (454)
Q Consensus 66 ~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~r~l 145 (454)
...+|.+.++.|.++.+.+.+.+...++..++.++.|++.||+|||+.+..+.++..+..++....+..+...+....+.
T Consensus 251 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (426)
T PRK12307 251 FGLLPTYLAGEGFDTGVVSNLMTAAAFGTVLGNIVWGLCADRIGLKKTFSIGLLMSFLFIFPLFRIPQDNYLLLGACLFG 330 (426)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHH
Confidence 34566666677999999999999999999999999999999999999998888777666655543331122222222222
Q ss_pred HHhhcccchhhhhHHHhhhcCccchHHHHHHHHhhHHHHHHhHHhHHHHHhhccCcchhHHH
Q 012902 146 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYS 207 (454)
Q Consensus 146 ~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~ig~~l~~~l~~~~gwr~~f~~ 207 (454)
.+.+.....+..+.++.|.+|+++||+++|+......+|..++|.+.+++.+++|+....++
T Consensus 331 ~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~~~~~gp~~~g~l~~~~g~~~~~~~ 392 (426)
T PRK12307 331 LMATNVGVGGLVPKFLYDYFPLEVRGLGTGLIYNLAATSGTFNSMAATWLGITMGLGAALTF 392 (426)
T ss_pred HHHhcccHhHHHHHHHHHhCcHHHHhhhhhHHHHHHhHHHHHHHHHHHHHHHcccHHHHHHH
Confidence 22332334455667889999999999999999999999999999999999998887654333
No 165
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.42 E-value=3.6e-12 Score=123.63 Aligned_cols=159 Identities=11% Similarity=0.056 Sum_probs=111.9
Q ss_pred hhhhcchh-hhhhcCCChhhHHHHHHHHHHHHHHhhhhhhhhhccc--cchHHH-HHHHHHHHHHHhhhhhcccccHHHH
Q 012902 64 NMSIAILP-MSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTV--GGKAVL-GFGVVWWSIATALTPVAAKLGLPFL 139 (454)
Q Consensus 64 ~~~~~~~~-i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~--Grr~~~-~~~~~~~~~~~~l~~~~~~~~~~~l 139 (454)
.....+|. ++++.|.+..+.++....+.++..++.++.|+++||+ |||+.. .....+..++.++..+.+..+.+..
T Consensus 271 ~~~~~~P~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 350 (452)
T PRK11273 271 GILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWLNPAGNPTVD 350 (452)
T ss_pred HHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcchHHHHHHHHHHHHHHHHHHhcccChHHH
Confidence 34445666 4555789999999999999999999999999999999 555432 2223333333333322221144555
Q ss_pred HHHHHHHHhhcccchhhhhHHHhhhcCccchHHHHHHHHhhHHHHHH-hHHhHHHHHhhccCcchhHHHHhHHHHHHHHH
Q 012902 140 LVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSV-TGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTV 218 (454)
Q Consensus 140 ~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~-ig~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~ 218 (454)
.+..++.|.+..........+..|.+|+++||+++|+.+....+|.. ++|.+.+.+.++.||+..|++.++.+++.++.
T Consensus 351 ~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~g~~v~g~l~~~~g~~~~f~~~~~~~~~~~~~ 430 (452)
T PRK11273 351 MACMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVIL 430 (452)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHcChhhhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHhcchHHHHHHHHHHHHHHHH
Confidence 55555666543333333445678999999999999999988888765 47999999999999999999988877776665
Q ss_pred HHHh
Q 012902 219 WLSK 222 (454)
Q Consensus 219 ~~~~ 222 (454)
....
T Consensus 431 ~~~~ 434 (452)
T PRK11273 431 LIVV 434 (452)
T ss_pred HHHH
Confidence 5543
No 166
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.41 E-value=3e-12 Score=115.73 Aligned_cols=179 Identities=11% Similarity=0.091 Sum_probs=136.6
Q ss_pred cchHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCcccchhhHhHHHHHHHHHHHHHHHHHhhhhhhcCccchhhHHHHHH
Q 012902 263 PPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQS 342 (454)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~ 342 (454)
+.+....+.+...++.-..+..-.|...++ .++|..|.|.+.+.+.+..-++.++.|.++||.+.|+ .+.
T Consensus 29 qif~~~fiGYa~fYl~RknF~~a~p~l~e~-~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr~---------fm~ 98 (448)
T COG2271 29 QIFLSIFIGYAAFYLTRKNFNLAMPALIED-GGLSKTQLGILGSAFSITYGVSKFVMGVLSDRSNPRY---------FMA 98 (448)
T ss_pred HHHHHHHHHHHHHHHHHHhHhhccHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCce---------eeh
Confidence 344455566666666666677777777666 6899999999999999999999999999999999995 334
Q ss_pred HHHHHHHHHHHHhhccChhHHHHHHHHHHHhhhhhhcchhh-hhhcccccccchhHHHHHHHHHHHHHHHHHHHH--HHH
Q 012902 343 IGFLGPAFFLTQLSHVDSPAMAVLCMACSQGTDAFSQSGLY-SNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAAT--GYI 419 (454)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~--g~l 419 (454)
.+++..++........++.....++..+.+.+.+...|... .+.+=.++++||+..++-|+..|+|+.+.|++. +.+
T Consensus 99 ~gLilsai~nil~Gfs~s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~~ 178 (448)
T COG2271 99 FGLILSAIVNILFGFSPSLFLFAVLWVLNGWFQGMGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVALLAFF 178 (448)
T ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCccccCceEEEehhhhhcccchHHHHHHHHHH
Confidence 45555555555555555666666666665555555555554 445556667999999999999999999999999 999
Q ss_pred hccCCchhHHHHHHHHHHHHHHHHHHhccCCc
Q 012902 420 LQHGSWDDVFKVSVGLYLVGTAVWNLFSTGEK 451 (454)
Q Consensus 420 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 451 (454)
.++.+|+..|++-+++.++..++.++..|++.
T Consensus 179 ~~~~~w~~~f~~pgiiaiival~~~~~~rd~P 210 (448)
T COG2271 179 AFHGGWRAAFYFPGIIAIIVALILLFLLRDRP 210 (448)
T ss_pred HhccchhHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 99999999999999999887777776655543
No 167
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.41 E-value=9.9e-12 Score=116.54 Aligned_cols=167 Identities=16% Similarity=0.274 Sum_probs=118.6
Q ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHhCCcccchhhHhHHHHHHHHHHHHHHHHHhhhhhhcCccchhhHHHHHHHHHHHH
Q 012902 269 IVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGP 348 (454)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~ 348 (454)
++..++...........+|.++.+++|.++.+.+++.+...++..++.+..|+++||+|||+.. .........
T Consensus 2 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l-------~~~~~~~~~ 74 (352)
T PF07690_consen 2 FLAFFLSGFGFSIISPALPLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRRVL-------IIGLLLFAL 74 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHHHH-------HHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeE-------eehhhhhhh
Confidence 3455666667777777888677777899999999999999999999999999999999999422 222222222
Q ss_pred HHHHHHhhccChhHHHHHHHHHHHhhhhhhcchhhhhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHhccCCchhH
Q 012902 349 AFFLTQLSHVDSPAMAVLCMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDV 428 (454)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~ 428 (454)
....... ..+.+......++.+.+.............+..++++|+++.|+.+...++|..++|.+.+.+.+..+|+..
T Consensus 75 ~~~~~~~-~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~ 153 (352)
T PF07690_consen 75 GSLLLAF-ASNFWLLLIARFLLGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISYFGWRWA 153 (352)
T ss_dssp HHHHHHH-HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHCHHCCH
T ss_pred HHHHhhh-hhhHHHHhhhccccccccccccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhhhccccccc
Confidence 2111111 134443334444444444444444444444555667999999999999999999999999999988999999
Q ss_pred HHHHHHHHHHHHHHH
Q 012902 429 FKVSVGLYLVGTAVW 443 (454)
Q Consensus 429 ~~~~~~~~~~~~~~~ 443 (454)
|++.++..++..++.
T Consensus 154 ~~~~~~~~~~~~il~ 168 (352)
T PF07690_consen 154 FLISAILSLIAAILF 168 (352)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred cccccchhhhhhhhH
Confidence 999999998887753
No 168
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.41 E-value=1.5e-11 Score=115.42 Aligned_cols=163 Identities=12% Similarity=0.031 Sum_probs=113.3
Q ss_pred HHHHHHHHhhHHHHHHHHhCCcccchhhHhHHHHHHHHHHHHHHHHHhhhhhhcCccchhhHHHHHHHHHHHHHHHHHHh
Q 012902 276 NWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQL 355 (454)
Q Consensus 276 ~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (454)
...+..+...+|.+.+| +|.|+.+.|++.+.+.++..++++..|+++||+|||+. .. ..+..........
T Consensus 4 ~~~~~~~~~~lp~i~~~-~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~-------~~--~~~~~~~~~~~~~ 73 (368)
T TIGR00903 4 QAIWVTFSPVLSLVAED-IDVSKEELGLLAITYPAAFLALTIPSGLLLDRAFKRWF-------LF--GSLATFAAAAGRL 73 (368)
T ss_pred hHHHHHHHhhHHHHHHH-hCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHH-------HH--HHHHHHHHHHHHH
Confidence 34555666677777666 89999999999999999999999999999999997732 11 1111111111111
Q ss_pred hc-cChhHHHHHHHHHHHhhhhhhcchhhhhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHH
Q 012902 356 SH-VDSPAMAVLCMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVG 434 (454)
Q Consensus 356 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~ 434 (454)
.. .+.......-++.+.+.+ ...+......+..|+++|+++.++.+....+|..+++.+.+.+.++.||+..|.+.++
T Consensus 74 ~~~~~~~~l~~~R~l~G~g~~-~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~gWr~~f~~~~~ 152 (368)
T TIGR00903 74 LDPFNYEWLLACQLLAALGQP-FLLNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYTAGGLQLLIIPIAA 152 (368)
T ss_pred HHhccHHHHHHHHHHHHhHhH-HHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHH
Confidence 11 233333333344444433 3334444456667788999999999999999999999999999999999999999887
Q ss_pred HHHHHHHHHHHhccC
Q 012902 435 LYLVGTAVWNLFSTG 449 (454)
Q Consensus 435 ~~~~~~~~~~~~~~~ 449 (454)
+.++..++..+..++
T Consensus 153 l~~~~~~~~~~~lp~ 167 (368)
T TIGR00903 153 VAAAGIILVLAALPA 167 (368)
T ss_pred HHHHHHHHHHHHcCC
Confidence 776666555554443
No 169
>PRK10504 putative transporter; Provisional
Probab=99.40 E-value=1.7e-11 Score=119.85 Aligned_cols=176 Identities=15% Similarity=0.214 Sum_probs=125.3
Q ss_pred cchHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCcccchhhHhHHHHHHHHHHHHHHHHHhhhhhhcCccchhhHHHHHH
Q 012902 263 PPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQS 342 (454)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~ 342 (454)
+.++.+.+..++.......+..++|.+.++ +|.++.+.++..+.+.++..++.++.|+++||+|||+... ..
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~-------~~ 81 (471)
T PRK10504 10 WQLWIVAFGFFMQSLDTTIVNTALPSMAQS-LGESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVRNIFF-------TA 81 (471)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHH-hCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHH-------HH
Confidence 356777778888888888888999999987 7999999999999999999999999999999999995322 11
Q ss_pred HHHHHHHHHHHHhhccChhHHHHHHHHHHHhhhhhhcchhhhhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 012902 343 IGFLGPAFFLTQLSHVDSPAMAVLCMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQH 422 (454)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~ 422 (454)
......+..... ...+.......-.+.+.+.+...........+..++++|+++.|+.+...++|..++|.+.|.+.++
T Consensus 82 ~~~~~~~~~~~~-~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~~~ 160 (471)
T PRK10504 82 IVLFTLGSLFCA-LSGTLNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLVEY 160 (471)
T ss_pred HHHHHHHHHHHH-HhCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhh
Confidence 111111111111 1222233333334444444443333333344555667899999999999999999999999999999
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHhc
Q 012902 423 GSWDDVFKVSVGLYLVGTAVWNLFS 447 (454)
Q Consensus 423 ~g~~~~~~~~~~~~~~~~~~~~~~~ 447 (454)
.||++.|.+......++.+......
T Consensus 161 ~gw~~~f~~~~~~~~l~~~~~~~~~ 185 (471)
T PRK10504 161 ASWHWIFLINIPVGIIGAIATLMLM 185 (471)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHhC
Confidence 9999999988777766665555443
No 170
>PRK09952 shikimate transporter; Provisional
Probab=99.40 E-value=9e-12 Score=120.23 Aligned_cols=153 Identities=12% Similarity=-0.002 Sum_probs=114.6
Q ss_pred hhhhhcCCChhhHHHHHHHHHHHHHHhhhhhhhhhccccchHHHHHHHHHHHHHHhhhhh---cccccHHHHHHHHHHHH
Q 012902 71 PMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPV---AAKLGLPFLLVVRVFMG 147 (454)
Q Consensus 71 ~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~l~~~---~~~~~~~~l~~~r~l~G 147 (454)
.+.+++|.+..+...+.....+...++.++.|+++||+|||+.+..+.++..++.+.+.. .. .+.+.+++..++.|
T Consensus 276 y~~~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~ 354 (438)
T PRK09952 276 YSTQNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADRFGRRRVYITGALIGTLSAFPFFMALEAQ-SIFWIVFFSIMLAN 354 (438)
T ss_pred HHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHcC-ChHHHHHHHHHHHH
Confidence 456778888877666666777778889999999999999999988887766555433322 22 03444455667778
Q ss_pred hhcccchhhhhHHHhhhcCccchHHHHHHHH-hhHHHHHHhHHhHHHHHhhcc--CcchhHHHHhHHHHHHHHHHHHhcC
Q 012902 148 IGEGVAMPAMNNILSKWVPVAERSRSLALVY-SGMYLGSVTGLAFSPFLIHRF--GWPSVFYSFGSLGTVWFTVWLSKAH 224 (454)
Q Consensus 148 ~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~-~~~~~g~~ig~~l~~~l~~~~--gwr~~f~~~~~~~~~~~~~~~~~~~ 224 (454)
++.+...+...++++|.+|.+.|+...++.. .+..+|..++|.+.+++.+.. +|+..+...++..++..+..+. .+
T Consensus 355 ~~~~~~~~~~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~~~~~~~~~~~~~~~~~i~~v~~~~-~~ 433 (438)
T PRK09952 355 IAHDMVVCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAALVTYFGGSWHSVAIYLLAGCLISAMTALL-MK 433 (438)
T ss_pred HHHHHHHHHHHHHHHHHCCcchhHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHH-cc
Confidence 8888888888999999999999998888854 445589999999999998743 4888888777777766555443 44
Q ss_pred C
Q 012902 225 S 225 (454)
Q Consensus 225 ~ 225 (454)
|
T Consensus 434 ~ 434 (438)
T PRK09952 434 D 434 (438)
T ss_pred c
Confidence 4
No 171
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.40 E-value=2.3e-11 Score=118.23 Aligned_cols=177 Identities=11% Similarity=0.134 Sum_probs=122.5
Q ss_pred CcchHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCcccchhhHhHHHHHHHHHHHHHHHHHhhh-hhhcCccchhhHHHH
Q 012902 262 KPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADT-LVSKGLSVTTVRKIM 340 (454)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~~~~~~~~~~~~~~~ 340 (454)
.|.++.++...+...+++++...+++.|+++.+|++..+++.+...+.....+..+++|+++|| +||||....+
T Consensus 13 p~~~~~~~~~~~~er~~~y~~~~~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g----- 87 (489)
T PRK10207 13 PRPFFMIFFVELWERFGYYGVQGILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLG----- 87 (489)
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHH-----
Confidence 3457777778888889999999999999999999999999998888888888888899999999 9999543322
Q ss_pred HHHHHHHHHHHHHHhhccChhHHHHHHHHHHHhhhhhhcchhhhhhcccccc--cchhHHHHHHHHHHHHHHHHHHHHHH
Q 012902 341 QSIGFLGPAFFLTQLSHVDSPAMAVLCMACSQGTDAFSQSGLYSNHQDIAPR--YSGVLLGLSNTAGVLAGVFGTAATGY 418 (454)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~g~~~~~~~~g~~~~~~~~g~ 418 (454)
......+...................+.+.+.+...........+..|++ +|+.+.++.+...++|..++|.+.|+
T Consensus 88 --~~~~~~g~~~~~~~~~~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g~ 165 (489)
T PRK10207 88 --AIVLAIGYFMTGMSLLKPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAPV 165 (489)
T ss_pred --HHHHHHHHHHHHHhccchhHHHHHHHHHHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHHH
Confidence 22222221111111111122222333334333333333333444445555 45778999999999999999999999
Q ss_pred HhccCCchhHHHHHHHHHHHHHHHHHH
Q 012902 419 ILQHGSWDDVFKVSVGLYLVGTAVWNL 445 (454)
Q Consensus 419 l~~~~g~~~~~~~~~~~~~~~~~~~~~ 445 (454)
+.++.||++.|++.++...++.+.+..
T Consensus 166 l~~~~gw~~~F~i~~i~~~~~~~~~~~ 192 (489)
T PRK10207 166 IADKFGYSVTYNLCGAGLIIALLVYFA 192 (489)
T ss_pred HHHhhChHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999876655555544444
No 172
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.39 E-value=1.7e-11 Score=117.75 Aligned_cols=158 Identities=14% Similarity=0.081 Sum_probs=134.7
Q ss_pred hhhhhcchhhhhhcCCChhhHHHHHHHHHHHHHHhhhhhhhhhccccch--HHHHHHHHHHHHHHhhhhh--------cc
Q 012902 63 VNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGK--AVLGFGVVWWSIATALTPV--------AA 132 (454)
Q Consensus 63 ~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr--~~~~~~~~~~~~~~~l~~~--------~~ 132 (454)
.........-.+++|++..+...+.-+..+...+|++++|++.||+|.| +++..++.++.+..+.-.+ .+
T Consensus 299 ti~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~~~~~i~~~g~~G~~~~~~g~~ 378 (477)
T PF11700_consen 299 TIISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLISLILWIIIPLYGLFGFWPSFFGLK 378 (477)
T ss_pred HHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHhhhcccCcc
Confidence 3344445556679999999999999999999999999999999999999 8888888777554444333 44
Q ss_pred cccHHHHHHHHHHHHhhcccchhhhhHHHhhhcCccchHHHHHHHHhhHHHHHHhHHhHHHHHhhccC-cchhHHHHhHH
Q 012902 133 KLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFG-WPSVFYSFGSL 211 (454)
Q Consensus 133 ~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~ig~~l~~~l~~~~g-wr~~f~~~~~~ 211 (454)
+.+.+.+.-++.|+..|..++...++.+|..|+++.+..+|++....-....+||.+.+.+.+..| -|+.+....++
T Consensus 379 --~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i~~~tg~~r~g~~~l~~l 456 (477)
T PF11700_consen 379 --SPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFGLITDATGSQRYGFLFLLVL 456 (477)
T ss_pred --cHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHH
Confidence 678899999999999999999999999999999999999999999999999999999999999876 89998888877
Q ss_pred HHHHHHHHHHh
Q 012902 212 GTVWFTVWLSK 222 (454)
Q Consensus 212 ~~~~~~~~~~~ 222 (454)
.++.+++..+.
T Consensus 457 f~~gl~ll~~v 467 (477)
T PF11700_consen 457 FLIGLILLFFV 467 (477)
T ss_pred HHHHHHHHhhc
Confidence 77776665443
No 173
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.39 E-value=2.1e-11 Score=115.92 Aligned_cols=169 Identities=15% Similarity=0.049 Sum_probs=114.5
Q ss_pred HHHHHHHHHHHHHHhhHHHHHHHHhCCcccchhhHhHHHHHHHHHHHHHHHHHhhhhhhcCccchhhHHHHHHHHHHHHH
Q 012902 270 VSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPA 349 (454)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~ 349 (454)
................+|.+.++ +|.|+.+.++..+...++..++.++.|++.||+|||+.. ... .....
T Consensus 12 ~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~-------~~~--~~~~~ 81 (385)
T TIGR00710 12 CLSILGPLGIDMYLPAFPEIAAD-LSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVL-------LLG--LFIFA 81 (385)
T ss_pred HHHHHHHHHHHHhcccHHHHHHH-hCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHH-------HHH--HHHHH
Confidence 33344444555556667766665 799999999999999999999999999999999998432 222 22212
Q ss_pred HHHHHhhccChhHHHH-HHHHHHHhhhhhhcchhhhhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHhccCCchhH
Q 012902 350 FFLTQLSHVDSPAMAV-LCMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDV 428 (454)
Q Consensus 350 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~ 428 (454)
.........++.+... ...+.+.+.............+..++++|+++.|+.+....+|..++|.+.+.+.+..+|+..
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~ 161 (385)
T TIGR00710 82 LSSLGLALSNNIETLLVLRFVQAFGASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVWLSWHAI 161 (385)
T ss_pred HHHHHHHHHccHHHHHHHHHHHHcchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHH
Confidence 2221122223333333 333334333333333333444555667899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhcc
Q 012902 429 FKVSVGLYLVGTAVWNLFST 448 (454)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~~~ 448 (454)
+++.++..++..+...+..+
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~ 181 (385)
T TIGR00710 162 FAFLSLAGILLSALIFFILP 181 (385)
T ss_pred HHHHHHHHHHHHHHHHHhCC
Confidence 99888877766665554433
No 174
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.39 E-value=3.3e-11 Score=114.36 Aligned_cols=174 Identities=14% Similarity=0.089 Sum_probs=122.8
Q ss_pred CcchHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCcccchhhHhHHHHHHHHHHHHHHHHHhhhhhhcCccchhhHHHHH
Q 012902 262 KPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQ 341 (454)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~ 341 (454)
++.++.+.+..+............+|.+.++ +|.+..+.++..+...++..++++..|++.||+|||+...
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~-------- 72 (382)
T PRK10091 2 KKVILSLALGTFGLGMAEFGIMGVLTELAHD-VGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHILL-------- 72 (382)
T ss_pred cchHHHHHHHHHHHHhhHHHHHhChHHHHHH-cCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccHHHHH--------
Confidence 3566777777788888888888888887766 7999999999999999999999999999999999995322
Q ss_pred HHHHHHHHHHHHHhhccChhHH-HHHHHHHHHhhhhhhcchhhhhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHh
Q 012902 342 SIGFLGPAFFLTQLSHVDSPAM-AVLCMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYIL 420 (454)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~ 420 (454)
.+..............++.+. .+.-.+.+.+.+...........+..++++|+++.|.......++..++|.+.+.+.
T Consensus 73 -~~~~~~~~~~~l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~ 151 (382)
T PRK10091 73 -FLVALCVIGNAMFTLSSSYLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLS 151 (382)
T ss_pred -HHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHh
Confidence 222222222222222333333 333344444333333222223334445568999999999999999999999999999
Q ss_pred ccCCchhHHHHHHHHHHHHHHHHHH
Q 012902 421 QHGSWDDVFKVSVGLYLVGTAVWNL 445 (454)
Q Consensus 421 ~~~g~~~~~~~~~~~~~~~~~~~~~ 445 (454)
+..+|+..|++.++..++..+....
T Consensus 152 ~~~gwr~~f~~~~~~~~~~~~~~~~ 176 (382)
T PRK10091 152 QEFSWRYTFLLIAVFNIAVLASIYF 176 (382)
T ss_pred hhccHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999988877666554443
No 175
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.38 E-value=6.2e-11 Score=112.75 Aligned_cols=157 Identities=10% Similarity=0.029 Sum_probs=108.9
Q ss_pred HHHHHHhhHHHHHHHHhCCcccchhhHhHHHHHHHHHHHHHHHHHhhhhhhcCccchhhHHHHHHHHHHHHHHHHHHhhc
Q 012902 278 GTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSH 357 (454)
Q Consensus 278 ~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (454)
..+.....+|.+.++ +|.++.+.++..+...++..+++++.|++.||+|||+... .. .............
T Consensus 35 ~~~~~~~~l~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~~-------~~--~~~~~~~~~~~~~ 104 (394)
T PRK10213 35 VEFLPVSLLTPMAQD-LGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRRYVVI-------LF--AVLLTLSCLLVSF 104 (394)
T ss_pred HHHHHHhhHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcHHHHH-------HH--HHHHHHHHHHHHH
Confidence 333445567776665 7999999999999999999999999999999999995332 11 1111111111222
Q ss_pred cChhHH-HHHHHHHHHhhhhhhcchhhhhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHH
Q 012902 358 VDSPAM-AVLCMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLY 436 (454)
Q Consensus 358 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~ 436 (454)
.++.+. .+.-.+.+.+.+...........+..++++|+++.++.....++|..++|.+.+.+.+..||+..|++.+++.
T Consensus 105 ~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~l~ 184 (394)
T PRK10213 105 ANSFSLLLIGRACLGLALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGELIGWRNVFNAAAVMG 184 (394)
T ss_pred HChHHHHHHHHHHHHHhhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHH
Confidence 233333 3333444544444433333334455566889999999999999999999999999999999999999887766
Q ss_pred HHHHHHHH
Q 012902 437 LVGTAVWN 444 (454)
Q Consensus 437 ~~~~~~~~ 444 (454)
++..+...
T Consensus 185 ~~~~l~~~ 192 (394)
T PRK10213 185 VLCIFWII 192 (394)
T ss_pred HHHHHHHH
Confidence 65544433
No 176
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.38 E-value=5.2e-11 Score=116.09 Aligned_cols=177 Identities=16% Similarity=0.085 Sum_probs=108.2
Q ss_pred hcCcchHHHHHHHHHH---HHHHHHHHhhHHHHHHHHhCCcccchhhHhHHHHHHHHHHHHHHHHHhhhhhhcCccchhh
Q 012902 260 LSKPPVWALIVSHFCH---NWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTV 336 (454)
Q Consensus 260 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~ 336 (454)
+++++.+......... ....+....+.|.+ ++.+|++..+.+...+...++..++.++.|+++||+|+|+...
T Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~~~--- 105 (476)
T PLN00028 30 FARPHMRAFHLSWISFFTCFVSTFAAAPLLPII-RDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPRYGSA--- 105 (476)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHH---
Confidence 4444444444443333 33333444445555 4458999999999988888999999999999999999994322
Q ss_pred HHHHHHHHHHHHHHHHHHhhccChhHHH-HHHHHHHHhhhhhhcchhhhhhcccccccchhHHHHHHHHHHHHHHHHHHH
Q 012902 337 RKIMQSIGFLGPAFFLTQLSHVDSPAMA-VLCMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAA 415 (454)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~ 415 (454)
.+.+............++.... +..++.+.+... ..+......+..++++||++.|+.+...++|..+++.+
T Consensus 106 ------~~~~~~~~~~~~~~~~~s~~~l~~~r~l~G~~~~~-~~~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~ 178 (476)
T PLN00028 106 ------FLLMLTAPAVFCMSLVSSATGFIAVRFFIGFSLAT-FVSCQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLL 178 (476)
T ss_pred ------HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHh-hHHHHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHH
Confidence 2222222222222222233332 333344443332 22333333444566899999999998888888888777
Q ss_pred HHHHhc----c-----CCchhHHHHHHHHHHHHHHHHHHhc
Q 012902 416 TGYILQ----H-----GSWDDVFKVSVGLYLVGTAVWNLFS 447 (454)
Q Consensus 416 ~g~l~~----~-----~g~~~~~~~~~~~~~~~~~~~~~~~ 447 (454)
.+.+.+ . .||+..|++.+++.++..+...++.
T Consensus 179 ~~~i~~~~~~~~~~~~~gWr~~f~i~g~l~l~~~l~~~~~~ 219 (476)
T PLN00028 179 MPLVFPLIKDAGAPSFTAWRIAFFVPGLLHIIMGILVLTLG 219 (476)
T ss_pred HHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHHHHHHHHHc
Confidence 765532 2 4899999998888776665555543
No 177
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.38 E-value=2.2e-11 Score=112.77 Aligned_cols=170 Identities=11% Similarity=0.088 Sum_probs=140.0
Q ss_pred HHhhhchhhhhcchhhhhhcCCChhhHHHHHHHHHHHHHHhhhhhhhhhccccchHHHHHHHHHHHHHHhhhhhcccccH
Q 012902 57 FIVFGQVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGL 136 (454)
Q Consensus 57 ~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~l~~~~~~~~~ 136 (454)
.+.+|.. ++.....+-++-+.++...|.+.+...+.-++.-.+..++.+|+|.|+.++++..+.++=.+++++++ |.
T Consensus 236 Y~vfdqq-f~~y~~~~f~~~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~rig~k~~Lllag~i~~iRi~~~~~~~--~~ 312 (412)
T PF01306_consen 236 YDVFDQQ-FPIYFASFFQSAGQGNQMYGYLWSVQVFLEALMMFFSPWLINRIGAKNLLLLAGVIMAIRIIGSGFAT--NP 312 (412)
T ss_dssp HHHHHHH-HHHHHHHTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHT----SH
T ss_pred HHHHHHH-HHHHHHHHhcccccChhHHhHHHHHHHHHHHHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHHhhhc--ch
Confidence 3445544 33222322233334567799999999999999999999999999999999999999999999999999 99
Q ss_pred HHHHHHHHHHHhhcccchhhhhHHHhhhcCccchHHHHHHH-HhhHHHHHHhHHhHHHHHhhccCcchhHHHHhHHHHHH
Q 012902 137 PFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALV-YSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVW 215 (454)
Q Consensus 137 ~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~-~~~~~~g~~ig~~l~~~l~~~~gwr~~f~~~~~~~~~~ 215 (454)
+.+.+.+.+.|+-.+........|+++.+|+|-.+....+. +.+.++|..+.+.++|.+.|+.|.+.+|++.+.+.++.
T Consensus 313 ~~i~~~klLH~~e~~l~lva~fkYI~~~fd~rlsAt~y~v~~~~~~~~~~~i~s~~~G~lyd~~G~~~tylimg~iv~~~ 392 (412)
T PF01306_consen 313 WVISLIKLLHALEFPLLLVAAFKYITAHFDKRLSATLYLVGFQFAKQIGIIILSPLAGYLYDRIGFQHTYLIMGLIVLPF 392 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHS-GGGHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhHHHHHHHHHHHHHHHHHHHHHhhhHHhhHhhcCcHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999988888888874 78899999999999999999999999999999998888
Q ss_pred HHHHHHhcCCCCCC
Q 012902 216 FTVWLSKAHSSPAE 229 (454)
Q Consensus 216 ~~~~~~~~~~~~~~ 229 (454)
.++..+.+++++++
T Consensus 393 ~li~~f~l~~~~~~ 406 (412)
T PF01306_consen 393 TLISAFTLKKDKKQ 406 (412)
T ss_dssp HHHHHHHS--SSST
T ss_pred HHHheeeecCCCcc
Confidence 88888877765543
No 178
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.38 E-value=4.1e-11 Score=113.12 Aligned_cols=168 Identities=15% Similarity=0.120 Sum_probs=112.5
Q ss_pred chHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCcccchhhHhHHHHHHHHHHHHHHHHHhhhhhhcCccchhhHHHHHHH
Q 012902 264 PVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSI 343 (454)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~ 343 (454)
.++..++..+...........+.|.++++.+|.|+.+.++..+...++..++.++.|+++||+|||+... ...
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~-------~~~ 74 (366)
T TIGR00886 2 NLFFSWFGFFLSFSVWFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYTTT-------LSL 74 (366)
T ss_pred chHHHHHHHHHHHHHHHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHHHH-------HHH
Confidence 4566777777777888888889998788889999999999999999999999999999999999995332 222
Q ss_pred HHHHHHHHHHHhhccC-hhHH-HHHHHHHHHhhhhhhcchhhhhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHhc
Q 012902 344 GFLGPAFFLTQLSHVD-SPAM-AVLCMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQ 421 (454)
Q Consensus 344 ~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~ 421 (454)
......... ....+ +.+. .+..++.+.+ .....+......+..++++|+++.++.....++|..+++.+.+.+.+
T Consensus 75 ~~~~i~~~~--~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~ 151 (366)
T TIGR00886 75 LLLAIPCLW--AGLAVQSYSVLLLLRLFIGIA-GGSFASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPIIG 151 (366)
T ss_pred HHHHHHHHH--HHHHhhhHHHHHHHHHHHHHh-chhhHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 111111111 11222 3333 3333333433 23333333344455566889999999998888888888888877665
Q ss_pred c----------CCchhHH-HHHHHHHHHHHH
Q 012902 422 H----------GSWDDVF-KVSVGLYLVGTA 441 (454)
Q Consensus 422 ~----------~g~~~~~-~~~~~~~~~~~~ 441 (454)
. .+|+..+ ...+++..+..+
T Consensus 152 ~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~ 182 (366)
T TIGR00886 152 SLIFGAGLPAHLAWGWAFVIVPAGILLLPAL 182 (366)
T ss_pred HHHhcccccccccccchhHHHHHHHHHHHHH
Confidence 2 4788888 433444433333
No 179
>PRK15075 citrate-proton symporter; Provisional
Probab=99.37 E-value=9.5e-12 Score=120.08 Aligned_cols=138 Identities=20% Similarity=0.174 Sum_probs=102.2
Q ss_pred hhhhcchhh-hhhcCCChhhHHHHHHHHHHHHHHhhhhhhhhhccccchHHHHHHHHHHHHHHh-hh---hhcccccHHH
Q 012902 64 NMSIAILPM-SAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATA-LT---PVAAKLGLPF 138 (454)
Q Consensus 64 ~~~~~~~~i-~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~-l~---~~~~~~~~~~ 138 (454)
......|.+ ++.+|.+..+.++....+.++..++.++.|+++||+|||+++..+..+..+... .. ...+ ++..
T Consensus 256 ~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 333 (434)
T PRK15075 256 LITVYTPTFGKTVLHLSAADSLLVTLCVGVSNFIWLPIGGALSDRIGRRPVLIAFTVLAILTAYPALSWLVAAP--SFAR 333 (434)
T ss_pred HHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHcCC--chHH
Confidence 344445664 445899999999999999999999999999999999999998776554433221 11 1123 4444
Q ss_pred HHHHHHHHHhhcccchhhhhHHHhhhcCccchHHHHHHHHh-hHHHHHHhHHhHHHHHhhccCcch
Q 012902 139 LLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYS-GMYLGSVTGLAFSPFLIHRFGWPS 203 (454)
Q Consensus 139 l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~-~~~~g~~ig~~l~~~l~~~~gwr~ 203 (454)
.....++.|++.+...+....++.|.+|+++|+...++... +..++..++|.+.+.+.++.|+++
T Consensus 334 ~~~~~~~~~~~~g~~~~~~~~~~~e~~p~~~rg~~~g~~~~~~~~~~g~~~p~~~g~i~~~~g~~~ 399 (434)
T PRK15075 334 MLAVELWLSFLYGSYNGAMVVALTEVMPAEVRTAGFSLAYSLATAIFGGFTPAISTWLIHVTGDKA 399 (434)
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHCCCCccchheeHHHHHHHHHHhhhHHHHHHHHHHhcCCch
Confidence 55556666777776667677889999999999999998644 444567889999999999888753
No 180
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.37 E-value=4.7e-11 Score=114.38 Aligned_cols=156 Identities=12% Similarity=0.019 Sum_probs=121.9
Q ss_pred chh-hhhhcCCChhhHHHHHHHHHHHHHHhhhhhhhhhccccchHHHHHHHHHHHHHHhhhhhcc---cccHHHHHHHHH
Q 012902 69 ILP-MSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAA---KLGLPFLLVVRV 144 (454)
Q Consensus 69 ~~~-i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~l~~~~~---~~~~~~l~~~r~ 144 (454)
.|. +.+++|.++.+.++......++..++.++.|+++||+|+|+.+..+.++..++.++....+ ..+.+.+.+.-+
T Consensus 238 ~p~~~~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 317 (406)
T PRK15402 238 SPVILISGEQLSSYEYGLLQVPVFGALIAGNLTLARLTSRRPLRSLIRMGLWPMVAGLLLAALATVISSHAYLWLTAGLS 317 (406)
T ss_pred hHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHH
Confidence 454 4577899999999988888889999999999999999999999999888877777665432 115667778899
Q ss_pred HHHhhcccchhhhhHHHhhhcCccchHHHHHHHHhhHHHHHHhHHhHHHHHhhccCcchhHHHHhHHHHHHHHHHHHhcC
Q 012902 145 FMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAH 224 (454)
Q Consensus 145 l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~ig~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~ 224 (454)
+.|++.+...+......... ++++||+..+..+....+|..+|+.+++.+.+..++....+..++..++..+....+.+
T Consensus 318 ~~g~g~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 396 (406)
T PRK15402 318 LYAFGIGLANAGLYRLTLFS-SDVSKGTVSAAMGMLSMLIFTVGIELSKHAYLGGGNGLFNLFNLANGLLWLLLVRIFLK 396 (406)
T ss_pred HHHHHHHHHhhhHHHHHhhh-ccccccHHHHHHHHHHHHHHHHHHHHHHhcccCCchHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999888777766655444 45899999999999999999999999999988888777666655555555444444444
Q ss_pred C
Q 012902 225 S 225 (454)
Q Consensus 225 ~ 225 (454)
+
T Consensus 397 ~ 397 (406)
T PRK15402 397 D 397 (406)
T ss_pred c
Confidence 3
No 181
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.36 E-value=1.8e-11 Score=116.87 Aligned_cols=143 Identities=8% Similarity=0.057 Sum_probs=122.6
Q ss_pred CCChhhHHHHHHHHHHHHHHhhhhhhhhhccccchHHHHHHHHHHHHHHhhhhhcccccHHHHHHHHHHHHhhcccchhh
Q 012902 77 NWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPA 156 (454)
Q Consensus 77 ~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~r~l~G~~~g~~~~~ 156 (454)
+.+..+.|.+.++..+...++.+..|++.||+|||+.+.++..+.+++..+...++ |.+.+++.++++|++.......
T Consensus 250 ~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~~~l~~~~~l~~l~~~~~~~~~--~~~~~~~~~~l~g~~~~~~~~~ 327 (396)
T TIGR00882 250 QQGTRVFGYVTTMGELLNALIMFCAPLIINRIGAKNALLIAGTIMSVRIIGSSFAT--TALEVVILKMLHAFEVPFLLVG 327 (396)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHhcC--ChHHHHHHHHHHHHHHHHHHHH
Confidence 45567789999999999999999999999999999999999999998888878888 8888899999999997766666
Q ss_pred hhHHHhhhcCccchHHHHHH-HHhhHHHHHHhHHhHHHHHhhccCcchhHHHHhHHHHHHHHHHHH
Q 012902 157 MNNILSKWVPVAERSRSLAL-VYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLS 221 (454)
Q Consensus 157 ~~~~i~~~~~~~~rg~~~~~-~~~~~~~g~~ig~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~ 221 (454)
...++.+..+++.++...+. .+....+|..+++.++|++.+..||+..|.+.+++.++..++..+
T Consensus 328 ~~~~~~~~~~~~~~at~~~~~~~~~~~lg~~~~~~l~G~l~~~~G~~~~f~~~~~~~~i~~~~~~~ 393 (396)
T TIGR00882 328 CFKYITSQFDVRLSATIYLIGFQFAKQLAMIFLSTLAGNMYDSIGFQGAYLVLGCIVLLFTLISVF 393 (396)
T ss_pred HHHHHHHhCCcceEEEeehHHHHHHHHHHHHHHHHhHHHHHHhcccHHHHHHHHHHHHHHHHHHHH
Confidence 66777888887777776665 678899999999999999999999999999998888777665443
No 182
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.36 E-value=1.7e-11 Score=116.79 Aligned_cols=148 Identities=17% Similarity=0.138 Sum_probs=116.1
Q ss_pred cchhhhhhcCCChhhHHHHHHHHHH-HHHHhhhhhhhhhccccchHHHHHHHHHHHHHHhhhhh------cccccHHHHH
Q 012902 68 AILPMSAEFNWNPATVGLIQSSFFW-GYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPV------AAKLGLPFLL 140 (454)
Q Consensus 68 ~~~~i~~~~~~s~~~~g~~~s~~~~-~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~l~~~------~~~~~~~~l~ 140 (454)
..+.+.+|.|.+++++|++...... ...++.++.|++.||+|+|+.+..+.++.++..+.... .+ +.+.+.
T Consensus 230 ~~~~~l~~~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 307 (390)
T TIGR02718 230 LSKLYLVDAGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLWRTFILGVGLAGSLALLWFAQAAFWLAP--GIAVAW 307 (390)
T ss_pred HhhHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHcccCC--cHHHHH
Confidence 3455556789999999999888764 66677899999999999999988877665333332211 22 344455
Q ss_pred HHHHHHHhhcccchhhhhHHHhhhcCc-cchHHHHHHHHhhHHHHHHhHHhHHHHHhhccCcchhHHHHhHHHHHHHH
Q 012902 141 VVRVFMGIGEGVAMPAMNNILSKWVPV-AERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFT 217 (454)
Q Consensus 141 ~~r~l~G~~~g~~~~~~~~~i~~~~~~-~~rg~~~~~~~~~~~~g~~ig~~l~~~l~~~~gwr~~f~~~~~~~~~~~~ 217 (454)
....+.+++.+...+...+...+..++ +++++.+++.+...++|..+||.++|.+.+..||+..|++.+.+.++..+
T Consensus 308 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g~~~~G~l~~~~G~~~~f~~~~~~~l~a~~ 385 (390)
T TIGR02718 308 SCSAFGSLITGITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELIASSIAGYLTDRFGYAGGFLSGTVLAVLAIL 385 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHH
Confidence 556677777787788888888888766 78999999999999999999999999999999999999988776666544
No 183
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.36 E-value=3.9e-11 Score=114.67 Aligned_cols=147 Identities=15% Similarity=0.182 Sum_probs=108.4
Q ss_pred hhhhhhcCCChhhHHHHHHHHH-HHHHHhhhhhhhhhccccchHHHHHHHHHHHHHHhhh---hhcccccHHHHHHHH--
Q 012902 70 LPMSAEFNWNPATVGLIQSSFF-WGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALT---PVAAKLGLPFLLVVR-- 143 (454)
Q Consensus 70 ~~i~~~~~~s~~~~g~~~s~~~-~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~l~---~~~~~~~~~~l~~~r-- 143 (454)
+.+.+++|.++++.+++.+... .+..++.++.|++.||+|+|+.+..+.++..+..+.. ++.++ +.+.+.+.-
T Consensus 234 ~~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~~~l~~~~~~~~l~~l~~~~~~~~~~-~~~~~~~~~~~ 312 (402)
T PRK11902 234 TFLIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRLGLYRSLMLFGVLQAVSNLGYWVLAVTPK-HLWTMALAIGI 312 (402)
T ss_pred HHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCC-cHHHHHHHHHH
Confidence 4567779999999999987654 5689999999999999999998877776666554433 34321 556555554
Q ss_pred --HHHHhhcccchhhhhHHHhhhcCccchHHHHHHHHhhHHHHHHhHHhHHHHHhhccCcchhHHHHhHHHHHHHHHHHH
Q 012902 144 --VFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLS 221 (454)
Q Consensus 144 --~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~ig~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~ 221 (454)
+..|++.+...+....++.+.+|.++ .++.+...++|..+++.++|.+.+++||+..|.+.+.++++..++...
T Consensus 313 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~l~~~~~~~~~G~l~~~~G~~~~f~~~~~~~~~~~~~~~~ 388 (402)
T PRK11902 313 ENLCGGMGTAAFVALLMALCNRSFSATQ----YALLSALASVGRVYVGPTSGYLVEAYGWPGFYLMTVVIALPGLALLWL 388 (402)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCcHHH----HHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHH
Confidence 34556666667777777777776554 455555667788777789999999999999999988888777555544
No 184
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.36 E-value=5.7e-11 Score=113.73 Aligned_cols=170 Identities=12% Similarity=0.029 Sum_probs=113.5
Q ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHhCCcccchhhHhHHHHHHHHHHHHHHHHHhhhhhhcCccchhhHHHHHHHHHH
Q 012902 267 ALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFL 346 (454)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~ 346 (454)
...+.+++.+..........| .+++++|.+..+.++..+.+.++..++++..|++.||+|||+.. ..+.+
T Consensus 12 ~~~~~~~~~~~d~~~~~~~~~-~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~---------~~~~~ 81 (412)
T TIGR02332 12 FLFILFIFSFLDRINIGFAGL-TMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAIIGARRWI---------AGIMV 81 (412)
T ss_pred HHHHHHHHHHhhhhhHHHHHH-hhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChHHHH---------HHHHH
Confidence 344444444444455555555 56667899999999999999999999999999999999999532 22222
Q ss_pred HHHHHHHHhhccChh-HHHHHHHHHHHhhhhhhcchhhhhh-cccccccchhHHHHHHHHHHHHHHHHHHHHHHHhc---
Q 012902 347 GPAFFLTQLSHVDSP-AMAVLCMACSQGTDAFSQSGLYSNH-QDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQ--- 421 (454)
Q Consensus 347 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~--- 421 (454)
............++. .....-++.+.+.+... +...... +..++++|+++.|+.+....+|..+++.+.+.+.+
T Consensus 82 ~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~-~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~~ 160 (412)
T TIGR02332 82 LWGIASTATMFATGPESLYLLRILVGIAEAGFL-PGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYILALDG 160 (412)
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhHH-HHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 222222222222333 33333444454444443 4443444 44566789999999999999999999999998874
Q ss_pred ---cCCchhHHHHHHHHHHHHHHHHHHhc
Q 012902 422 ---HGSWDDVFKVSVGLYLVGTAVWNLFS 447 (454)
Q Consensus 422 ---~~g~~~~~~~~~~~~~~~~~~~~~~~ 447 (454)
..||+..|++.++..++...+..++.
T Consensus 161 ~~~~~gwr~~f~~~~~~~l~~~~~~~~~~ 189 (412)
T TIGR02332 161 LMALKGWQWLFLLEGFPSVILGVMTWFWL 189 (412)
T ss_pred CCCccchhHHHHHHHHHHHHHHHHHhhcc
Confidence 36899999998777766555444443
No 185
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.35 E-value=9.7e-11 Score=114.90 Aligned_cols=174 Identities=17% Similarity=0.113 Sum_probs=121.7
Q ss_pred hHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCcccchhhHhHHHHHHHHHHHHHHHHHhhhhhhcCccchhhHHHHHHHH
Q 012902 265 VWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIG 344 (454)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~ 344 (454)
+..+++..++...-......-+|.+.++ +|.++.+.++..+.+.++.....+..|+++||+|||+.+. . +
T Consensus 8 ~~~~~~~~~~~~ld~tiv~~a~p~i~~~-l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l~-------~--~ 77 (495)
T PRK14995 8 LVIIVLVYIPVAIDATVLHVAAPTLSMT-LGASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFKRLLM-------L--G 77 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHH-------H--H
Confidence 3345555666666666677778888776 7999999999999999999999999999999999994322 2 2
Q ss_pred HHHHHHHHHHhhccChhHHHHH-HHHHHHhhhhhhcchhhhhhccc-ccccchhHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 012902 345 FLGPAFFLTQLSHVDSPAMAVL-CMACSQGTDAFSQSGLYSNHQDI-APRYSGVLLGLSNTAGVLAGVFGTAATGYILQH 422 (454)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~ 422 (454)
..............++.+..+. -.+.+.+.+...+.......++. ++++|+++.|+......+|..+||.+.|.+.++
T Consensus 78 ~~~~~~~~~~~~~a~~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~~ 157 (495)
T PRK14995 78 GTLFGLASLAAAFSPTASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILLEH 157 (495)
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 2222222222222334433333 34445544443333333444555 457899999999999999999999999999999
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHhcc
Q 012902 423 GSWDDVFKVSVGLYLVGTAVWNLFST 448 (454)
Q Consensus 423 ~g~~~~~~~~~~~~~~~~~~~~~~~~ 448 (454)
.||++.|++...+.++..++.....+
T Consensus 158 ~gwr~~f~i~~~~~~~~~~l~~~~l~ 183 (495)
T PRK14995 158 FYWGSVFLINVPIVLVVMGLTARYVP 183 (495)
T ss_pred CChHHHHHHHHHHHHHHHHHHHHhCC
Confidence 99999999888777766655544433
No 186
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.35 E-value=1.6e-11 Score=118.89 Aligned_cols=123 Identities=15% Similarity=0.182 Sum_probs=107.0
Q ss_pred ChhhHHHHHHHHHHHHHHhhhhhhhhhccccchHHHHHHHHHHHHHHhhhhhcccccHHHHHHHHHHHHhhcccchhhhh
Q 012902 79 NPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMN 158 (454)
Q Consensus 79 s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~ 158 (454)
++.+.+++.+...++..++.+++++++||+|+|+++..+.++.+++.++..+.+. +.+.+.+..++.|++.+...+...
T Consensus 255 ~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~ 333 (437)
T TIGR00792 255 DPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRKILFAGGILLMVLGYLIFFFAGS-NLPLILVLIILAGFGQNFVTGLVW 333 (437)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcch-hHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5667788888899999999999999999999999999999888888877766531 567777888999999999999999
Q ss_pred HHHhhhcC-------ccchHHHHHHHHhhHHHHHHhHHhHHHHHhhccCcc
Q 012902 159 NILSKWVP-------VAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWP 202 (454)
Q Consensus 159 ~~i~~~~~-------~~~rg~~~~~~~~~~~~g~~ig~~l~~~l~~~~gwr 202 (454)
++++|..+ ++++|.+.|+.+....+|..+++.+.+.+.+..||.
T Consensus 334 ~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g~ll~~~G~~ 384 (437)
T TIGR00792 334 ALVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLVGLILGIIGYV 384 (437)
T ss_pred HHHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 99998865 456899999999999999999999999999887774
No 187
>PRK11043 putative transporter; Provisional
Probab=99.35 E-value=1e-10 Score=111.83 Aligned_cols=172 Identities=13% Similarity=0.090 Sum_probs=112.1
Q ss_pred HHHHHHHHHHHHHHHHhhHHHH--HHHHhCCcccchhhHhHHHHHHHHHHHHHHHHHhhhhhhcCccchhhHHHHHHHHH
Q 012902 268 LIVSHFCHNWGTFILLTWMPTY--YNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGF 345 (454)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~--l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~ 345 (454)
+....+.....+.+...+.|.+ +++++|.++.+.++..+...++..++.++.|+++||+|||+... .....
T Consensus 8 ~~~~~~~~~~~~~~~~~~~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~-------~~~~~ 80 (401)
T PRK11043 8 LVYLAGLSMLGFLATDMYLPAFKAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPVLL-------AGLSL 80 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHH-------HHHHH
Confidence 3334444444455555555544 45568999999999999999999999999999999999995322 21111
Q ss_pred HHHHHHHHHhhccChhH-HHHHHHHHHHhhhhhhcchhhhhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHhccCC
Q 012902 346 LGPAFFLTQLSHVDSPA-MAVLCMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGS 424 (454)
Q Consensus 346 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g 424 (454)
.. .........++.+ ......+.+.+.............+..++++++...+..+....++..++|.+.+.+.+..|
T Consensus 81 ~~--~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g 158 (401)
T PRK11043 81 FA--LGSLGMLWVESAAQLLVLRFVQAVGVCSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLNHFG 158 (401)
T ss_pred HH--HHHHHHHHhcCHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 11 1111111222333 33333333333333322222333455566678888999888899999999999999999999
Q ss_pred chhHHHHHHHHHHHHHHHHHHhcc
Q 012902 425 WDDVFKVSVGLYLVGTAVWNLFST 448 (454)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~~~~~~~ 448 (454)
|+..|++.++..++..+......+
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~ 182 (401)
T PRK11043 159 WQAIFATLFAITLLLILPTLRLKP 182 (401)
T ss_pred hHHHHHHHHHHHHHHHHHHHHcCC
Confidence 999999888777776665554443
No 188
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.35 E-value=1e-10 Score=111.49 Aligned_cols=175 Identities=13% Similarity=0.049 Sum_probs=118.5
Q ss_pred chHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCcccchhhHhHHHHHHHHHHHHHHHHHhhhhhhcCccchhhHHHHHHH
Q 012902 264 PVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSI 343 (454)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~ 343 (454)
-+.......+....+.......+|.+.++ +|.|..+.++..+.+.++..++.++.|+++||+|||+... .
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~lp~~~~~-~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~---------~ 73 (392)
T PRK10473 4 FLLCSFALVLLYPAGIDMYLVGLPRIAAD-LNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPVAI---------P 73 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhHHHHHHH-hCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCChHHHH---------H
Confidence 33444455555555666666778887776 7999999999999999999999999999999999984322 2
Q ss_pred HHHHHHHHHHHhhccChhH-HHHHHHHHHHhhhhhhcchhhhhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 012902 344 GFLGPAFFLTQLSHVDSPA-MAVLCMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQH 422 (454)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~ 422 (454)
+..............++.+ ......+.+.+.+...........+..++++|+++.|+.+....++..++|.+.+.+.+.
T Consensus 74 ~~~~~~i~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~ 153 (392)
T PRK10473 74 GAALFIIASLLCSLAETSSLFLAGRFLQGIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLK 153 (392)
T ss_pred HHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 2222222222222223332 333333334333333333334444556678999999999999999999999999998888
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHhcc
Q 012902 423 GSWDDVFKVSVGLYLVGTAVWNLFST 448 (454)
Q Consensus 423 ~g~~~~~~~~~~~~~~~~~~~~~~~~ 448 (454)
.+|+..+++.+++.++..++.....+
T Consensus 154 ~g~~~~~~~~~~~~~i~~~~~~~~~~ 179 (392)
T PRK10473 154 FPWQSLFYTMAAMGILVLLLSLFILK 179 (392)
T ss_pred cChHHHHHHHHHHHHHHHHHHHHHcC
Confidence 99999999888877766665444433
No 189
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.34 E-value=5.2e-11 Score=116.97 Aligned_cols=171 Identities=16% Similarity=0.206 Sum_probs=119.8
Q ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHhCCcccchhhHhHHHHHHHHHHHHHHHHHhhhhhhcCccchhhHHHHHHHHHH
Q 012902 267 ALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFL 346 (454)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~ 346 (454)
.+++..+.............|.+.++ +|.++.+.++..+.+.++..++.++.|++.||+|||+... .+..
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~---------~~~~ 75 (485)
T TIGR00711 6 VLMLGTFMAVLDSTIVNVAIPTIAGD-LGSSLSQVQWVITSYMLANAISIPLTGWLAKRFGTRRLFL---------ISTF 75 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHh-cCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHH---------HHHH
Confidence 44555556666666677778877776 7999999999999999999999999999999999994322 2222
Q ss_pred HHHHHHHHhhccChhH-HHHHHHHHHHhhhhhhcchhhhhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHhccCCc
Q 012902 347 GPAFFLTQLSHVDSPA-MAVLCMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSW 425 (454)
Q Consensus 347 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~ 425 (454)
............++.. ......+.+.+.+...........+..++++|+++.++......+|..++|.+.|.+.++.+|
T Consensus 76 ~~~~~~~~~~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~w 155 (485)
T TIGR00711 76 AFTLGSLLCGVAPNLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIENYHW 155 (485)
T ss_pred HHHHHHHHHhCcCCHHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhccCcCc
Confidence 2222222222223333 333334444444443433344444556678999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHhc
Q 012902 426 DDVFKVSVGLYLVGTAVWNLFS 447 (454)
Q Consensus 426 ~~~~~~~~~~~~~~~~~~~~~~ 447 (454)
++.|++.+...++..++..+..
T Consensus 156 ~~~f~~~~~~~~~~~~~~~~~~ 177 (485)
T TIGR00711 156 RWIFLINVPIGIIVVVVAFFIL 177 (485)
T ss_pred eehhhhhhHHHHHHHHHHHHHc
Confidence 9999988877766665554443
No 190
>TIGR00895 2A0115 benzoate transport.
Probab=99.33 E-value=2.6e-11 Score=115.69 Aligned_cols=131 Identities=15% Similarity=0.169 Sum_probs=109.1
Q ss_pred hhhhhcchhhhhhcCCChhhHHHHHHHHHHHHHHhhhhhhhhhccccchHHHHHHHHHHHHHHhhhhhcccccHHHHHHH
Q 012902 63 VNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVV 142 (454)
Q Consensus 63 ~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~ 142 (454)
.......|.+.+++|.+..+.++..+...++..++.++.|++.||+|||+......+......++....+ +.+.+++.
T Consensus 267 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 344 (398)
T TIGR00895 267 YFLTNWLPKLMVELGFSLSLAATGGALFNFGGVIGSIIFGWLADRLGPRVTALLLLLGAVFAVLVGSTLF--SPTLLLLL 344 (398)
T ss_pred HHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHhh--CHHHHHHH
Confidence 3444456788888999999999999999999999999999999999999555444443333333333355 67778888
Q ss_pred HHHHHhhcccchhhhhHHHhhhcCccchHHHHHHHHhhHHHHHHhHHhHHHHH
Q 012902 143 RVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFL 195 (454)
Q Consensus 143 r~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~ig~~l~~~l 195 (454)
.++.|++.+...+...+++.|.+|+++|++++|+......+|..+||.++|.+
T Consensus 345 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~G~l 397 (398)
T TIGR00895 345 GAIAGFFVNGGQSGLYALMALFYPTAIRATGVGWAIGIGRLGAIIGPILAGYL 397 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHhHHhc
Confidence 99999999999999999999999999999999999999999999999999875
No 191
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.32 E-value=6.7e-11 Score=111.48 Aligned_cols=167 Identities=17% Similarity=0.223 Sum_probs=130.6
Q ss_pred HhhhchhhhhcchhhhhhcC-CChhhHHHHHHHHHHHHHHhhhhhhhhhccccchHHHHHHHHHHHHHHhhhhhc-cccc
Q 012902 58 IVFGQVNMSIAILPMSAEFN-WNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVA-AKLG 135 (454)
Q Consensus 58 ~~~~~~~~~~~~~~i~~~~~-~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~l~~~~-~~~~ 135 (454)
.+.....+....+...+|.| .+....+.+.++..++-.+.-...+++..|+|.|+++.++.+..++=..+.+.. + +
T Consensus 219 ~~~~~~~~~~f~~~yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~~ll~~a~~~~~vR~~l~a~~~~--~ 296 (400)
T PF03825_consen 219 IGISHAAYYTFFSIYLQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRFGIKWLLLLALVAYAVRWLLYAYFSD--P 296 (400)
T ss_pred HHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhcC--C
Confidence 33344444444555566666 677788888888899999999999999999999999999999999999998887 4 4
Q ss_pred HHHHH----HHHHHHHhhcccchhhhhHHHhhhcCccchHHHHHHHHh-hHHHHHHhHHhHHHHHhhccCcch------h
Q 012902 136 LPFLL----VVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYS-GMYLGSVTGLAFSPFLIHRFGWPS------V 204 (454)
Q Consensus 136 ~~~l~----~~r~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~-~~~~g~~ig~~l~~~l~~~~gwr~------~ 204 (454)
.+... ....++|+..+..+.....++.+.+|+|.|+++.+++.. ..++|..+|..++|++.|++|-+. .
T Consensus 297 ~~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~igG~l~~~~g~~~~~~~~~~ 376 (400)
T PF03825_consen 297 WPFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLIGGWLYDAFGARGMFDWSAV 376 (400)
T ss_pred cHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcchhhhhHHHH
Confidence 44333 335679999999999999999999999999999999876 468999999999999999877553 4
Q ss_pred HHHHhHHHHHHHHHHHHhcCCC
Q 012902 205 FYSFGSLGTVWFTVWLSKAHSS 226 (454)
Q Consensus 205 f~~~~~~~~~~~~~~~~~~~~~ 226 (454)
+.+.+.+.++..++...+.||+
T Consensus 377 ~~v~a~~~~~~~~~f~~~fk~~ 398 (400)
T PF03825_consen 377 FLVFAVMALVILVLFVILFKPK 398 (400)
T ss_pred HHHHHHHHHHHHHHHHhhccCC
Confidence 4555555555555555554443
No 192
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.29 E-value=1.5e-10 Score=109.77 Aligned_cols=178 Identities=12% Similarity=0.045 Sum_probs=108.5
Q ss_pred cchHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCcccchhhHhHHHHHHHHHHHHHHHHHhhhhhhcCccchhhHHHHHH
Q 012902 263 PPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQS 342 (454)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~ 342 (454)
|+++...+.........+.+....+.+-++.+|+|+.|.+++.+...+...+.++..|++.||+|.|+... ..
T Consensus 34 r~l~~s~~~f~~~F~~w~~~~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~~-------~~ 106 (462)
T PRK15034 34 RNLWISVSCLLLAFCVWMLFSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRRWTV-------FS 106 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHH-------HH
Confidence 45666666655555555666555666556469999999999999999999999999999999999995322 22
Q ss_pred HHHHHHHHHHHHhh---c-cChhHHHHHHHHHHHhhhhhhcchhhhhhcccccccchhHHHHHHHHHHHHHHHHHHHHHH
Q 012902 343 IGFLGPAFFLTQLS---H-VDSPAMAVLCMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGY 418 (454)
Q Consensus 343 ~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~ 418 (454)
.............. . .+.....+...+.+.+ +....+.......-.++++||++.|+....+++|..+++.+.+.
T Consensus 107 ~ll~~i~~~~~~~a~~~~~~s~~~lli~r~l~Gig-g~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l~p~ 185 (462)
T PRK15034 107 TAILIIPCVWLGIAVQNPNTPFGIFIVIALLCGFA-GANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQLVAPL 185 (462)
T ss_pred HHHHHHHHHHHHHHHcccCCCHHHHHHHHHHHHHH-HHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 22222222222111 1 2333334444444444 33333333344444566789999999977777777766666554
Q ss_pred Hh-----cc-------------CCchhHHHHHHHHHHHHHHHHHHhcc
Q 012902 419 IL-----QH-------------GSWDDVFKVSVGLYLVGTAVWNLFST 448 (454)
Q Consensus 419 l~-----~~-------------~g~~~~~~~~~~~~~~~~~~~~~~~~ 448 (454)
+. +. .+++.+.++.....++..++.++..+
T Consensus 186 ~i~~~l~~~~G~~~~~~~~g~~~~~~~~~~~~~~~~iv~~i~~~~~~~ 233 (462)
T PRK15034 186 VIFVPVFAFLGVNGVPQADGSVMSLANAAWIWVPLLAIATIAAWSGMN 233 (462)
T ss_pred HHHHHHHHHhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 33 22 23555666666666555555555433
No 193
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.29 E-value=9.6e-11 Score=113.27 Aligned_cols=175 Identities=11% Similarity=0.013 Sum_probs=109.7
Q ss_pred cchHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCcccchhhHhHHHHHHHHHHHHHHHHHhhhhhhcCccchhhHHHHHH
Q 012902 263 PPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQS 342 (454)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~ 342 (454)
+.++...+.....+.....+....| ++++ .|.++.+.++..+...++..++.+..|+++||+|+|+....+
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~------- 97 (438)
T TIGR00712 27 QVFLGIFFGYAAYYLVRKNFALAMP-YLVE-QGFSKGELGFALSAISIAYGFSKFIMGSVSDRSNPRVFLPAG------- 97 (438)
T ss_pred HHHHHHHHHHHHHHHHhccHHhhhH-HHHH-cCCCHhHhHHHHHHHHHHHHHhhhccchhhhccCCceehHHH-------
Confidence 3344444444444444444455555 5556 499999999999999999999999999999999998643321
Q ss_pred HHHHHHHHHHHHhhc--cChhHHH-HHHHHHHHhhhhhhcchhhhhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHH
Q 012902 343 IGFLGPAFFLTQLSH--VDSPAMA-VLCMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYI 419 (454)
Q Consensus 343 ~~~~~~~~~~~~~~~--~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l 419 (454)
............... .++.... ....+.+.+.+....+......+..++++|++++|+.+...++++.++|.+.+..
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~ 177 (438)
T TIGR00712 98 LILSAAVMLLMGFVPWATSSIAIMFVLLFLNGWFQGMGWPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLLG 177 (438)
T ss_pred HHHHHHHHHHHhccccccchHHHHHHHHHHHHHHhhcchHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHHHHH
Confidence 111111111111111 1222222 2223333333333333334444556678999999999999999999999888765
Q ss_pred hc-cCCchhHHHHHHHHHHHHHHHHHHh
Q 012902 420 LQ-HGSWDDVFKVSVGLYLVGTAVWNLF 446 (454)
Q Consensus 420 ~~-~~g~~~~~~~~~~~~~~~~~~~~~~ 446 (454)
.+ ..+|+..|++.++..++..+...++
T Consensus 178 ~~~~~~w~~~f~~~~~~~~i~~~~~~~~ 205 (438)
T TIGR00712 178 MAWFNDWHAALYFPAICAIIVALFAFAM 205 (438)
T ss_pred HHHhhhhHHHHHHHHHHHHHHHHHHHHh
Confidence 54 4789999999888877665544443
No 194
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.28 E-value=1.6e-10 Score=109.82 Aligned_cols=170 Identities=15% Similarity=0.127 Sum_probs=115.1
Q ss_pred CcchHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCcccchhhHhHHHHHHHHHHHHHHHHHhhhhhhcCccchhhHHHHH
Q 012902 262 KPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQ 341 (454)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~ 341 (454)
+|+++.+.+..++..++........+...++ ++.++.+.++....+.+...+..++.|+++||++||+.+..+. ...
T Consensus 2 ~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~--~~~ 78 (393)
T PRK11195 2 SKGFYAIMAAQFFSALADNALLFAAIALLKE-LHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKGRVMFIAN--GIK 78 (393)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCchhhHHHH--HHH
Confidence 5677888888888777666666666666555 7889999999999999999999999999999999997655332 111
Q ss_pred HHHHHHHHHHHHHhhccChhHHHHHHHHHHHhhhhhhcchhhhhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHhc
Q 012902 342 SIGFLGPAFFLTQLSHVDSPAMAVLCMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQ 421 (454)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~ 421 (454)
.++.+ . .... .+. ...-.+.+.+.+...+.......+.+++|+|++++|+.+...+++..+||.++|.+.+
T Consensus 79 ~~~~~---~--~~~~--~~~--~~~r~l~G~~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~ 149 (393)
T PRK11195 79 LLGCL---L--MLFG--IHP--LLAYGLVGIGAAAYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGALAD 149 (393)
T ss_pred HHHHH---H--HHHH--HHH--HHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11111 1 1111 111 2222334444444444444444566667899999999999999999999999999998
Q ss_pred cCCchhHHHHHHHHHHHHHHHHH
Q 012902 422 HGSWDDVFKVSVGLYLVGTAVWN 444 (454)
Q Consensus 422 ~~g~~~~~~~~~~~~~~~~~~~~ 444 (454)
.. +...+.+.+.+.+++.+...
T Consensus 150 ~~-~~~~~~i~~~~~~~~~~~~~ 171 (393)
T PRK11195 150 PH-AEAALAVCALIYLLAALFNL 171 (393)
T ss_pred HH-HHHHHHHHHHHHHHHHHHHh
Confidence 64 66666666555544444333
No 195
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.28 E-value=3.2e-10 Score=108.16 Aligned_cols=168 Identities=10% Similarity=-0.013 Sum_probs=108.6
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHhCCcccchhhHhHHHHHHHHHHHHHHHHHhhhhhhcCccchhhHHHHHHHHHHH
Q 012902 268 LIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLG 347 (454)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~ 347 (454)
......+..+........+|.+.++ +|.|+.+.++..+...++..++.+..|+++||+|||+... .......
T Consensus 13 ~~~~~~~~~~~~~~~~p~~~~i~~~-~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~~-------~~~~~~~ 84 (394)
T PRK11652 13 LVLLVAVGQMAQTIYVPAIADMARD-LNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRPVIL-------VGMSIFI 84 (394)
T ss_pred HHHHHHHHHHHHHHHhccHHHHHHH-hCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHH-------HHHHHHH
Confidence 3333334444444455566776666 7999999999999999999999999999999999995332 1111111
Q ss_pred HHHHHHHhhccChhHH-HHHHHHHHHhhhhhhcchhhhhh-cccccccchhHHHHHHHHHHHHHHHHHHHHHHHhccCCc
Q 012902 348 PAFFLTQLSHVDSPAM-AVLCMACSQGTDAFSQSGLYSNH-QDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSW 425 (454)
Q Consensus 348 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~ 425 (454)
..... ....++.+. ....++.+.+.+.. .+...... +..++++++.+.+..+....++..++|.+.+.+.+..||
T Consensus 85 ~~~~~--~~~~~~~~~l~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~ 161 (394)
T PRK11652 85 LGTLV--ALFAHSLTVLIAASAIQGLGTGVG-GVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTTLFGW 161 (394)
T ss_pred HHHHH--HHHHccHHHHHHHHHHHHhhhhHH-HHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCh
Confidence 11111 112233333 33333333333322 22222333 334557899999999999999999999999999998999
Q ss_pred hhHHHHHHHHHHHHHHHHHHh
Q 012902 426 DDVFKVSVGLYLVGTAVWNLF 446 (454)
Q Consensus 426 ~~~~~~~~~~~~~~~~~~~~~ 446 (454)
+..|++.++..++..+...+.
T Consensus 162 ~~~f~~~~~~~~~~~~~~~~~ 182 (394)
T PRK11652 162 RACYLFLLLLGAGVTFSMARW 182 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHh
Confidence 999998877666554444333
No 196
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.28 E-value=1.4e-10 Score=106.02 Aligned_cols=130 Identities=9% Similarity=0.090 Sum_probs=108.6
Q ss_pred hcCCChhhHHHHHHHHHHHHHHhhhhhhhhhccccchHHHHHHHHHHHHHHhhhhhcccccHHHHHHHHHHHHhhcccch
Q 012902 75 EFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMGIGEGVAM 154 (454)
Q Consensus 75 ~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~r~l~G~~~g~~~ 154 (454)
++|.++++.+...+.+..+..++.+..+++.||+|+|+.+..+..+..++.++....+ +...+ ..-++.|++.+..+
T Consensus 172 ~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~~~~l~~~~~~l~~~~~--~~~~~-~~~~l~g~~~s~i~ 248 (310)
T TIGR01272 172 ALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRYLAFNAFLAVLLSIGAALTH--GYVAM-WFVLALGLFNSIMF 248 (310)
T ss_pred cCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHcC--CHHHH-HHHHHHHHHHHHHH
Confidence 3689999999999999999999999999999999999999888888888877666655 44333 35568899999999
Q ss_pred hhhhHHHhhhcCccchHHHHHHHHhhHHHHHHhHHhHHHHHhhccCcchhHHHHh
Q 012902 155 PAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFG 209 (454)
Q Consensus 155 ~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~ig~~l~~~l~~~~gwr~~f~~~~ 209 (454)
|...+...+..| ++.+.+.++. ....+|..++|++.|.+.|..|.+..|++..
T Consensus 249 P~~~s~a~~~~~-~~~~~asai~-~~~~~Gg~i~P~l~G~lad~~g~~~a~~v~~ 301 (310)
T TIGR01272 249 PTIFSLALNALG-RHTSQGSGIL-CLAIVGGAIVPLLQGSLADCLGIQLAFALPV 301 (310)
T ss_pred HHHHHHHHhhhh-hhhhhhHHHH-HHHHhcchHHHHHHHHHHHhccchHHHHHHH
Confidence 999999999886 4456677775 4567899999999999999999999887543
No 197
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=99.28 E-value=3e-09 Score=99.89 Aligned_cols=353 Identities=12% Similarity=0.057 Sum_probs=197.0
Q ss_pred HHhhhchhhhhcchhhhhhcC-CChhhHHHHHHHHHHHHHHhhhhhhhhhccccchHHHHHHHHHHHHHHhhhh------
Q 012902 57 FIVFGQVNMSIAILPMSAEFN-WNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTP------ 129 (454)
Q Consensus 57 ~~~~~~~~~~~~~~~i~~~~~-~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~l~~------ 129 (454)
+...+.-++....|.+..+.. -+.-..+...-.-.+...++++..|.+.||..|.++...+.+.--++.++.+
T Consensus 13 ls~w~dR~w~Fa~~L~L~~i~p~sLl~~siygl~~~~~~~~f~~~vG~~iD~~~Rl~~~~~~l~~Qn~sv~~s~~~~~~l 92 (432)
T PF06963_consen 13 LSTWGDRMWEFAVPLFLISIFPGSLLPVSIYGLVRSLSAILFGPWVGRWIDRSPRLKVIRTSLVVQNLSVAASCALFLLL 92 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHhhHHHHHHHhCCcchhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 566666677777776555542 2333444455556677788899999999999999987776654332222211
Q ss_pred hcccc-----c--HHHHHHHHHHHHhhcccc-hhhhhHHHhhhc------CccchHHHHHHHHhhHHHHHHhHHhHHHHH
Q 012902 130 VAAKL-----G--LPFLLVVRVFMGIGEGVA-MPAMNNILSKWV------PVAERSRSLALVYSGMYLGSVTGLAFSPFL 195 (454)
Q Consensus 130 ~~~~~-----~--~~~l~~~r~l~G~~~g~~-~~~~~~~i~~~~------~~~~rg~~~~~~~~~~~~g~~ig~~l~~~l 195 (454)
+.... + ...+++.-.+.|.-.-.. .....+.=.||. +++.+.+..+...-.--+..+++|++.|.+
T Consensus 93 ~~~~~~~~~~~~~~~~l~~~~~~~~~i~~Las~~~~iavERDWVvvi~~~~~~~La~~NA~mRRIDL~ckllaPl~vG~l 172 (432)
T PF06963_consen 93 LSYPSSSSQSSWLFIALFALLILLGAIERLASIANTIAVERDWVVVIAGGDPGALARMNATMRRIDLFCKLLAPLFVGLL 172 (432)
T ss_pred HhCCccccccchHHHHHHHHHHHHHHHHHHHHhhhhheeccchhhhhcCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11100 0 111222222222211111 111112223443 344556666666666677899999999999
Q ss_pred hhccCcchhHHHHhHHHHHHHHHHHHhc----CCCCC---CCCCCChhhhhhhh-hccccCC-----------CCCCcch
Q 012902 196 IHRFGWPSVFYSFGSLGTVWFTVWLSKA----HSSPA---EDPQLRPAEKKLIV-SSCASKE-----------PVKTIPW 256 (454)
Q Consensus 196 ~~~~gwr~~f~~~~~~~~~~~~~~~~~~----~~~~~---~~~~~~~~~~~~~~-~~~~~~~-----------~~~~~~~ 256 (454)
.+..+.+....+.++..++...+=+++. +..|+ ++++.++++.+... ...++++ .....+|
T Consensus 173 ~t~~s~~~~~~~i~~~N~~S~~vEy~~l~~VY~~~P~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w 252 (432)
T PF06963_consen 173 MTFASPVIAAIFIAGWNLASVFVEYFLLARVYNSVPALAVKKRSSESESSSDEESSSESSSDPSILKRLWNPLRTIIRGW 252 (432)
T ss_pred hhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHhcCCCCCccccccccccccccccchhhHHHHHHHHHHHHhccH
Confidence 9988999888888888887766433222 11111 11111111000000 0000000 0012345
Q ss_pred hHhhcCcchHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCcccchhhHhHHHHHHHHHHHHHHHHHhhhhhhcCccchhh
Q 012902 257 GLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTV 336 (454)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~ 336 (454)
+..++.|.+... +...+.++...++......|+... |+++...|..-....+.++.+.+...++.+|+|..|.-.++.
T Consensus 253 ~~Y~~q~vflas-~alalLY~TVLsf~~lmt~yl~~~-G~s~~~igi~R~~gav~Gl~gT~~~p~l~~riGlvr~G~~~l 330 (432)
T PF06963_consen 253 RTYFRQPVFLAS-FALALLYFTVLSFGGLMTAYLKSQ-GYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRIGLVRAGLWSL 330 (432)
T ss_pred HHHHhCHHHHHH-HHHHHHHHHHhcCcHHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHH
Confidence 556666655443 333444444556677888899996 999999999999999999999999999999999776544332
Q ss_pred HHHHHHHHHHHHHHHHHHhhccChhHHHHHHH-----HHHHhhhhhhcchhhhhhcccccccchhHHHHHHHHHHHHHHH
Q 012902 337 RKIMQSIGFLGPAFFLTQLSHVDSPAMAVLCM-----ACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVF 411 (454)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~ 411 (454)
..-..++..+.........+........+ +-=.|.-+.-........+.+|+++||...|.-+...++...+
T Consensus 331 ---~~q~~~L~~~v~~~~~~~~~~~~~s~~~l~~gi~~SR~GLW~fDL~~~qi~Qe~V~~~~Rg~v~gvq~sl~~lf~ll 407 (432)
T PF06963_consen 331 ---WWQWVCLALCVVSFWAPGSPFSSISAYLLLGGIALSRIGLWSFDLAVTQIMQENVPESERGAVSGVQNSLQSLFELL 407 (432)
T ss_pred ---HHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHHHHHHHHHhhhHHHHHhhcccCCHHHhhHHHHHHHHHHHHHHHH
Confidence 11122222222222222211011111111 1122233333445555667788889999999999998887765
Q ss_pred HHH
Q 012902 412 GTA 414 (454)
Q Consensus 412 ~~~ 414 (454)
.-.
T Consensus 408 ~~~ 410 (432)
T PF06963_consen 408 SFV 410 (432)
T ss_pred HHH
Confidence 443
No 198
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.28 E-value=1.6e-10 Score=109.49 Aligned_cols=159 Identities=14% Similarity=0.076 Sum_probs=110.4
Q ss_pred HHHHHHhhHHHHHHHHhCCcccchhhHhHHHHHHHHHHHHHHHHHhhhhhhcCccchhhHHHHHHHHHHHHHHHHHHhhc
Q 012902 278 GTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSH 357 (454)
Q Consensus 278 ~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (454)
+.......+|.+.++ +|.++.+.++..+...++..++.++.|++.||+|||+... .+.............
T Consensus 6 ~~~~~~p~~~~~~~~-~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~---------~~~~~~~i~~~~~~~ 75 (377)
T PRK11102 6 AIDMYLPALPVIAAD-FGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPVIL---------GGTLVFALAAVACAL 75 (377)
T ss_pred HHHHHhccHHHHHHH-hCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCChHHHH---------HHHHHHHHHHHHHHH
Confidence 344555778888877 7999999999999999999999999999999999884322 222222121111122
Q ss_pred cChh-HHHHHHHHHHHhhhhhhcchhhhhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHH
Q 012902 358 VDSP-AMAVLCMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLY 436 (454)
Q Consensus 358 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~ 436 (454)
.++. .......+.+.+.............+..++++|+++.++.+....+|..++|.+.+.+.+..+|+..|++.++..
T Consensus 76 ~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 155 (377)
T PRK11102 76 AQTIDQLIYMRFLHGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWFSWHAIFWVLALAA 155 (377)
T ss_pred HccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHHH
Confidence 2233 333333344444433333333344455566789999999999999999999999999999999999999888877
Q ss_pred HHHHHHHHHh
Q 012902 437 LVGTAVWNLF 446 (454)
Q Consensus 437 ~~~~~~~~~~ 446 (454)
++..+.....
T Consensus 156 ~~~~~~~~~~ 165 (377)
T PRK11102 156 ILAAALVFFF 165 (377)
T ss_pred HHHHHHHHHh
Confidence 7665554443
No 199
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=99.28 E-value=9.9e-08 Score=90.86 Aligned_cols=256 Identities=9% Similarity=0.025 Sum_probs=161.9
Q ss_pred chhhhhhcCC-----ChhhHHHHHHHHHHHHHHh-hhhhhhhhccccchHHHHHHHHHHHHHHhhhhhc--c--cc----
Q 012902 69 ILPMSAEFNW-----NPATVGLIQSSFFWGYLLT-QIAGGIWADTVGGKAVLGFGVVWWSIATALTPVA--A--KL---- 134 (454)
Q Consensus 69 ~~~i~~~~~~-----s~~~~g~~~s~~~~~~~~~-~~~~g~l~dr~Grr~~~~~~~~~~~~~~~l~~~~--~--~~---- 134 (454)
+-++++.+.+ +.+.+.++-+...+...+. .++.+++++|++|++++-.-...+....+++++. | ..
T Consensus 26 LR~lKD~lvv~~~~~gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~~~~~lf~~~~~~F~~~f~lF~~vl~p~~~~~~p~ 105 (472)
T TIGR00769 26 LRDTKDTLVVTAKGSGAEIIPFLKTWVVVPMAVIFMLIYTKLSNILSKEALFYTVISPFLGFFALFAFVIYPLSDLLHPT 105 (472)
T ss_pred HHhhhhheeecccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHhHHHHHHHHHHHHHHHHHHHhcchhhcCCc
Confidence 3445555544 4468899999888877766 9999999999999999888777777777766654 1 00
Q ss_pred ---------------------cHHHHHHHHHHHHhhcccchh-hhhHHHhhhcCccchHHHHHHHHhhHHHHHHhHHhHH
Q 012902 135 ---------------------GLPFLLVVRVFMGIGEGVAMP-AMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFS 192 (454)
Q Consensus 135 ---------------------~~~~l~~~r~l~G~~~g~~~~-~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~ig~~l~ 192 (454)
+.|...+.-+...+-.....+ ....+.+|.++.++-.|..++++.+.++|..+++.+.
T Consensus 106 ~~~~~~~~~~~~~~~~~i~~~~~W~~~~FYv~~elw~~~vvS~lFW~fandi~t~~qakRfy~l~~~ganlg~i~sg~~~ 185 (472)
T TIGR00769 106 ALADKLLSLLPPGFMGFIAILRIWSFALFYVMAELWGSVVLSLLFWGFANQITTIDEAKRFYALFGLGANVALIFSGRTI 185 (472)
T ss_pred HHHHHHHhhcchhhHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 123444455555555555555 7788999999999999999999999999999999998
Q ss_pred HHHhhc--------cCcc----hhHHHHhHHHHHHHHHHHHhcCCCCCCCCCCChhhhhhhhhccccCCCCCCcchhHhh
Q 012902 193 PFLIHR--------FGWP----SVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLIL 260 (454)
Q Consensus 193 ~~l~~~--------~gwr----~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (454)
.++.+. -.|. ..+.+.++.+++...+... +.+...++++..+.++ ..++++++.....+++.++
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~-l~~~~~~~~~~~~~~~---~~~k~k~k~~~~es~k~i~ 261 (472)
T TIGR00769 186 KYFSKLRASLGPGVDGWHVSLKNLMVIVICSGLAIILLYWW-VNRNVLTDPRSYNPAL---KEKKVKPKMSTMESLKFLV 261 (472)
T ss_pred HHHHHhhhccccccChHHHHHHHHHHHHHHHHHHHHHHHHH-HHhcccCCccccchhh---ccccCCCCCCHHHHHHHHH
Confidence 888731 1232 2333333333333333333 2222211111111110 0011111122245677789
Q ss_pred cCcchHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCcccc----hhhHhHHHHHHHHHHHHHHHHHhhhhhhc
Q 012902 261 SKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTE----SGLFCVLPWLTMAFSANLGGWIADTLVSK 329 (454)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~----~~~~~~~~~~~~~~~~~~~g~l~dr~~~~ 329 (454)
|+|.++.+++...+.+...+.+..-.-..+++.+- |+.+ .|.+....++..++..++.+++.+|+|-+
T Consensus 262 ~S~yL~~ia~~vi~y~~~~nlve~~~k~~v~~~~p-~~~~~~~f~g~~~~~~gi~tl~~~l~~~~l~~~~Gw~ 333 (472)
T TIGR00769 262 SSPYILDLALLVIAYGISINLVEVTWKSKLKAQYP-SPNEYSAFMGDFSTWTGVVSVTMMLLSGNVIRKYGWL 333 (472)
T ss_pred hCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHH
Confidence 99999988888888887777777655566666442 3322 23344444555556666678899998876
No 200
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.27 E-value=9.6e-11 Score=115.27 Aligned_cols=162 Identities=10% Similarity=0.005 Sum_probs=108.7
Q ss_pred hhcchhhhhhcCCChhhHHH------------HHHHHHHHHHHhhhhhhhhhccccchHHHHHHHHHHHHHHhhhhhccc
Q 012902 66 SIAILPMSAEFNWNPATVGL------------IQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAK 133 (454)
Q Consensus 66 ~~~~~~i~~~~~~s~~~~g~------------~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~l~~~~~~ 133 (454)
....|.+.++.|.+..+.+. ......++..++.++.++++||+|||+.++.+..+.+++..+.++...
T Consensus 308 ~~~~p~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~gRR~~l~~~~~~~~~~~~~l~~~~~ 387 (502)
T TIGR00887 308 NLNQKVILSAIGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDIIGRKPIQLMGFFILTVLFFVLGFAYN 387 (502)
T ss_pred ccccHHHHHHHcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhHHHHHHHHHHHHHHHHHHHHH
Confidence 33467766777776442211 233445566678889999999999999998888777777665554320
Q ss_pred --ccHHHHHHHHHHHHhhcccchhhhhHHHhhhcCccchHHHHHHHHhhHHHHHHhHHhHHHHHhhc----------cCc
Q 012902 134 --LGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHR----------FGW 201 (454)
Q Consensus 134 --~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~ig~~l~~~l~~~----------~gw 201 (454)
.+...+...-+...++.....+....+.+|.+|.+.|+++.|+.+....+|..++|.+.+.+.+. .++
T Consensus 388 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 467 (502)
T TIGR00887 388 HLSTHGFLAIYVLAQFFANFGPNATTFIVPGEVFPTRYRSTAHGISAASGKAGAIIGQFGFLYLAQHGDPTKGYPTGIWM 467 (502)
T ss_pred hcchhHHHHHHHHHHHHHhcCCCchhhhhhhccCchhHHHHHHHHHHHHhhhHHHHHHHHhhhhhccccccccccccccc
Confidence 01111221112222222234456677789999999999999999999999999999999998873 345
Q ss_pred chhHHHHhHHHHHHHHHHHHhcCCCCC
Q 012902 202 PSVFYSFGSLGTVWFTVWLSKAHSSPA 228 (454)
Q Consensus 202 r~~f~~~~~~~~~~~~~~~~~~~~~~~ 228 (454)
...|++.++++++..+. .++.||++.
T Consensus 468 ~~~~~i~~~~~~~~~i~-~~~lpEt~~ 493 (502)
T TIGR00887 468 GHVLEIFALFMFLGILF-TLLIPETKG 493 (502)
T ss_pred hHHHHHHHHHHHHHHHH-heEeccCCC
Confidence 66788888777776554 355677543
No 201
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=99.26 E-value=1.9e-10 Score=99.68 Aligned_cols=167 Identities=13% Similarity=0.035 Sum_probs=127.7
Q ss_pred HhhhchhhhhcchhhhhhcCCChhhHHHHHHHHHHHHHHhhhhhhhhhccccchHHHHHHHHHHHHHHhhhhhcc-----
Q 012902 58 IVFGQVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAA----- 132 (454)
Q Consensus 58 ~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~l~~~~~----- 132 (454)
.....+.++..-|++++.+|.|.+|...+.+...+|..+ .++.|.+.|++|.|.++.+|.+...+|..+...+-
T Consensus 14 ~~Gt~Y~Fs~yS~~Lk~~l~~sq~~l~~l~~~~~~G~~~-G~~~G~l~d~~gp~~~l~iG~~~~~~GY~~~~l~~~~~i~ 92 (250)
T PF06813_consen 14 CSGTTYTFSAYSPQLKSRLGYSQSQLNTLSTAGDIGSYF-GILAGLLYDRFGPWVVLLIGAVLGFVGYGLLWLAVSGRIP 92 (250)
T ss_pred hcCcccchhhhhHHHHHHhCCCHHHHHHHHHHHHHHhhc-cHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCccC
Confidence 334566777788999999999999999999999999986 58899999999999999999999999988765432
Q ss_pred cccHHHHHHHHHHHHhhcccchhhhhHHHhhhcCccchHHHHHHHHhhHHHHHHhHHhHHHHHhhccCcchhHHHHhHHH
Q 012902 133 KLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLG 212 (454)
Q Consensus 133 ~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~ig~~l~~~l~~~~gwr~~f~~~~~~~ 212 (454)
..++|.+.+..++.|.+.+.....+.....+.|| ++||.+.|+.-...+++..+-..+...+.+.-.-+. ++..+...
T Consensus 93 ~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP-~~RG~vvgilk~~~GLSaai~t~i~~~~f~~~~~~f-ll~la~~~ 170 (250)
T PF06813_consen 93 SLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFP-RSRGTVVGILKGFFGLSAAIFTQIYSAFFGDDPSSF-LLFLAVLP 170 (250)
T ss_pred ccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCc-cccCceehhhhHHHHhHHHHHHHHHHHHcCCChHHH-HHHHHHHH
Confidence 1267888888889988887777777777788996 689999999999999998888777776665422333 33334433
Q ss_pred HHHHHHHHHhcCCCC
Q 012902 213 TVWFTVWLSKAHSSP 227 (454)
Q Consensus 213 ~~~~~~~~~~~~~~~ 227 (454)
.+..++...+.++.|
T Consensus 171 ~~v~l~~~~~vr~~~ 185 (250)
T PF06813_consen 171 AVVCLVAMFFVRPVP 185 (250)
T ss_pred HHHHHHHhhheeccC
Confidence 333333434444443
No 202
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.26 E-value=4.4e-11 Score=113.32 Aligned_cols=141 Identities=14% Similarity=0.105 Sum_probs=104.7
Q ss_pred hhhcchh-hhhhcCCChhhHHHHHHHHHHHHHHhhhhhhhhhccccc-hHH-HHHHH-HHHHHHHhhhhhcccccHHHHH
Q 012902 65 MSIAILP-MSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGG-KAV-LGFGV-VWWSIATALTPVAAKLGLPFLL 140 (454)
Q Consensus 65 ~~~~~~~-i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Gr-r~~-~~~~~-~~~~~~~~l~~~~~~~~~~~l~ 140 (454)
.....|. +.+++|.++.+.+++.+.+.++..++.++.|++.||.++ |+. +.... ....++.......+..+.+...
T Consensus 235 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (379)
T TIGR00881 235 ILDWSPLYLTQEKGFSKEKASWAFTLYELGGLVGTLLAGWLSDKLFNGRRGPLAVFFMALIIVSLLVYWLNPAANPLMDL 314 (379)
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHHHHHcchhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHhcCcchhHHHHH
Confidence 3334444 566789999999999999999999999999999998643 332 22211 2222222222221111455666
Q ss_pred HHHHHHHhhcccchhhhhHHHhhhcCccchHHHHHHHHhhHHHHHHhHHhHHHHHhhccCcchhH
Q 012902 141 VVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVF 205 (454)
Q Consensus 141 ~~r~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~ig~~l~~~l~~~~gwr~~f 205 (454)
+..++.|+......+....++.|.+|+++|+++.|+.+....+|..++|.+.|.+.+++||++.|
T Consensus 315 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~f 379 (379)
T TIGR00881 315 ICLFALGFLVYGPQMLIGVIASELAPKKAAGTAAGFVGFFAYLGGILAGLPLGYLADGFGWAGAF 379 (379)
T ss_pred HHHHHHHHHHhhhhHHHHHHHHHhcCcchhHHHHHHHHHhhhhhhhhhhhhHHHHHHhhcccccC
Confidence 77778887666666667788999999999999999999999999999999999999999999865
No 203
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.26 E-value=9.8e-11 Score=110.02 Aligned_cols=135 Identities=16% Similarity=0.117 Sum_probs=109.4
Q ss_pred hhhcchhhhhhcCCChhhHHHHHHHHHHHHHHhhhhhhhhhccc-cchHHHHHHHHHHHHHHhhhhhcccccHHHHHHHH
Q 012902 65 MSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTV-GGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVR 143 (454)
Q Consensus 65 ~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-Grr~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~r 143 (454)
.....|.+.++.|.|..+.+.+.+...++..+++++.|++.||+ +||+.+..+..+.+++.+...+.+ +.+... .-
T Consensus 216 ~~~~lp~~~~~~g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-~~ 292 (355)
T TIGR00896 216 LIGWLPAILISHGASAATAGSLLALMQLAQAASALLIPALARRVKDQRGIVAVLAVLQLVGLCGLLFAP--MHGLWA-WA 292 (355)
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHhh--hhHHHH-HH
Confidence 33446766677899999999999999999999999999999999 567777788888888877777766 433322 45
Q ss_pred HHHHhhcccchhhhhHHHhhhcC-ccchHHHHHHHHhhHHHHHHhHHhHHHHHhhccC-cc
Q 012902 144 VFMGIGEGVAMPAMNNILSKWVP-VAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFG-WP 202 (454)
Q Consensus 144 ~l~G~~~g~~~~~~~~~i~~~~~-~~~rg~~~~~~~~~~~~g~~ig~~l~~~l~~~~g-wr 202 (454)
++.|++.+...+...+.+.+..+ +++++...++.+....+|..++|.+.|.+.++.| |.
T Consensus 293 ~l~g~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gp~~~G~l~~~~g~~~ 353 (355)
T TIGR00896 293 LVLGLGQGGAFPLALTLIGLRSRQAAQAAALSAMAQSIGYLLAALGPLFVGVLHDISGNWL 353 (355)
T ss_pred HHHHHhhhhHhHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccC
Confidence 78899999988888787776554 5667899999998889999999999999998776 44
No 204
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.26 E-value=2.5e-10 Score=110.19 Aligned_cols=155 Identities=12% Similarity=0.034 Sum_probs=99.5
Q ss_pred hhcchh-hhhhcCCChhhHHHHHHHHHHHHHHhhhhhhhhhccccchHHHHHHHHHHHHHHhhhh--hcccccHHHHHHH
Q 012902 66 SIAILP-MSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTP--VAAKLGLPFLLVV 142 (454)
Q Consensus 66 ~~~~~~-i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~l~~--~~~~~~~~~l~~~ 142 (454)
...+|. +.+++|.+..+.+...++..+...+++++.|+++||+|||+.+..+.++.++...... .....+....+..
T Consensus 263 ~~~lp~~l~~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (432)
T PRK10406 263 TTYMQKYLVNTAGMHANVASGIMTAALFVFMLIQPLIGALSDKIGRRTSMLCFGSLAALFTVPILSALQNVSSPYAAFGL 342 (432)
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHH
Confidence 334555 5567899999999999998888899999999999999999988776654433332111 1110023322222
Q ss_pred HHHHHhhcccchhhhhHHHhhhcCccchHHHHHHHHhhHHH-HHHhHHhHHHHHhhccC-cchhHHHHhHHHHHHHHHHH
Q 012902 143 RVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYL-GSVTGLAFSPFLIHRFG-WPSVFYSFGSLGTVWFTVWL 220 (454)
Q Consensus 143 r~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~-g~~ig~~l~~~l~~~~g-wr~~f~~~~~~~~~~~~~~~ 220 (454)
-.+.++..+...+....+++|++|+|.|+.++|+.+...++ .....|.+.+.+ +..| |...++..++..++..+..+
T Consensus 343 ~~~~~~~~~~~~~~~~~~~~e~fp~~~r~t~~g~~~~~g~~~~g~~~p~~~~~l-~~~g~~~~~~~~~~~~~~i~~~~~~ 421 (432)
T PRK10406 343 VMCALLIVSFYTSISGILKAEMFPAQVRALGVGLSYAVANALFGGSAEYVALSL-KSIGMETAFFWYVTLMAVVAFLVSL 421 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCccchhhhHHHHHHHHHHHhHHHHHHHHH-HHhCCCcHHHHHHHHHHHHHHHHHH
Confidence 22232333334455677899999999999999998765553 344577777755 4445 55556655555555544444
Q ss_pred H
Q 012902 221 S 221 (454)
Q Consensus 221 ~ 221 (454)
+
T Consensus 422 ~ 422 (432)
T PRK10406 422 M 422 (432)
T ss_pred H
Confidence 3
No 205
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.26 E-value=6.9e-11 Score=114.26 Aligned_cols=174 Identities=17% Similarity=0.158 Sum_probs=152.3
Q ss_pred HHHHHHHHHHHHHhhhchhhhhcchhhhhhcCCChhhHHHHHHHHHHHHHHhhhhhhhhhcccc--chHHHHHHHHHHHH
Q 012902 46 ISLCVGNFEQIFIVFGQVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVG--GKAVLGFGVVWWSI 123 (454)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G--rr~~~~~~~~~~~~ 123 (454)
+........ +..+...+....+|...++.+.+..+.+.+.++..+...++.+..|+++|+.. ++.+..++++..++
T Consensus 300 fl~~~~~~~--~~~~g~~~p~~~l~~~~~~~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~~~~~~~~~~~~ll~~gl 377 (509)
T KOG2504|consen 300 FLLLALSNL--FAYLGFNVPFVYLPSYAKSLGLSSNDAAFLLSIIGVSDIIGRIILGLLADKPGIRALVLFLLTLLIAGL 377 (509)
T ss_pred HHHHHHHHH--HHHHHHHHHHHHHHHHHhhcCCChhhhHHHHHHHHHhhhhhhhhhhhhcCccccchHHHHHHHHHHHHH
Confidence 333444444 56666677777889999999999999999999999999999999999999988 55667888888899
Q ss_pred HHhhhhhcccccHHHHHHHHHHHHhhcccchhhhhHHHhhhcCccchHHHHHHHHhhHHHHHHhHHhHHHHHhhccC-cc
Q 012902 124 ATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFG-WP 202 (454)
Q Consensus 124 ~~~l~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~ig~~l~~~l~~~~g-wr 202 (454)
+...+++++ +++.+....++.|+..|........++.|..+.++-..+.|+.....+++..+||++.|.+.+..| |.
T Consensus 378 ~~~~~p~~~--~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~l~gpPiag~~~d~tg~Y~ 455 (509)
T KOG2504|consen 378 ARLFLPFAT--TYVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEKLSNAYGLLLLFQGIGALVGPPIAGLLYDITGNYD 455 (509)
T ss_pred HHHHHHHhc--cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhhcchHHHHHHHHhHHHHHcCcccceeeeeccCCee
Confidence 999999999 999999999999999999888888899999999999999999999999999999999999998877 99
Q ss_pred hhHHHHhHHHHHHHHHHHHhc
Q 012902 203 SVFYSFGSLGTVWFTVWLSKA 223 (454)
Q Consensus 203 ~~f~~~~~~~~~~~~~~~~~~ 223 (454)
..|+..+...++.....+...
T Consensus 456 ~~f~~~g~~~~~s~~~~~~~~ 476 (509)
T KOG2504|consen 456 HAFYFCGLCFLLSAVLLLILR 476 (509)
T ss_pred eehhhcChHHHHHHHHHHHhH
Confidence 999999988888766555443
No 206
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.25 E-value=6.4e-11 Score=107.40 Aligned_cols=166 Identities=18% Similarity=0.110 Sum_probs=133.4
Q ss_pred HHHHHHHHHHHHhhhchhhhhcchhhhhhcCCChhhHHHHHHHHHHHHHHhhhhhhhhhccccchHHHHHHHHHHHHHHh
Q 012902 47 SLCVGNFEQIFIVFGQVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATA 126 (454)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~ 126 (454)
...+++.+.+.++.+ ......-..-..++|++..++..+.....+..+++++++|+|.||+|.|+++..++++..+.++
T Consensus 255 ~~FLiA~~~~~DGv~-til~~~~~fg~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lvi~~~~~~ 333 (438)
T COG2270 255 VLFLIARFFYIDGVN-TILAMGGVFGAADLGLSSTELLLIGIALSVVAALGAIIAGFLDERFGSKPVLMIGLVILSIAAL 333 (438)
T ss_pred HHHHHHHHHHHhhHH-HHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeehHHHHHHHHHHH
Confidence 333344442244443 2233333334559999999999999999999999999999999999999999999999888888
Q ss_pred hhhhcccccHHHHHHHHHHHHhhcccchhhhhHHHhhhcCccchHHHHHHHHhhHHHHHHhHHhHHHHHhhccC-cchhH
Q 012902 127 LTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFG-WPSVF 205 (454)
Q Consensus 127 l~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~ig~~l~~~l~~~~g-wr~~f 205 (454)
..-+.. .-..+.++-.+.|...|..+..+-++.++.+|++|-++.+|+++...-.+..+||.+.+.+.+..| -|..+
T Consensus 334 ~~~~~~--~~~~f~i~gll~g~s~G~~qA~SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~iTg~~r~g~ 411 (438)
T COG2270 334 YLIFLE--GELDFWILGLLVGTSLGGAQASSRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQITGSSRAGV 411 (438)
T ss_pred HHHHcc--ccHHHHHHHHHHHHhcchHHHHHHHHHHHhCCCccccceeehhhhhhhHHHHHHHHHHHHHHHHhcchhhHH
Confidence 777766 556677888999999999999999999999999999999999999999999999999999988554 56666
Q ss_pred HHHhHHHHHH
Q 012902 206 YSFGSLGTVW 215 (454)
Q Consensus 206 ~~~~~~~~~~ 215 (454)
.....+.++.
T Consensus 412 ~~i~vll~iG 421 (438)
T COG2270 412 LSIIVLLLIG 421 (438)
T ss_pred HHHHHHHHhh
Confidence 6555544444
No 207
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.23 E-value=1.3e-10 Score=105.46 Aligned_cols=159 Identities=18% Similarity=0.136 Sum_probs=125.5
Q ss_pred hhhhcchh-hhhhcCCChhhHHHHHHHHHHHHHHhhhhhhhhhccccchHHHHHHHHHHHHHHhhhhhccc-----ccHH
Q 012902 64 NMSIAILP-MSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAK-----LGLP 137 (454)
Q Consensus 64 ~~~~~~~~-i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~l~~~~~~-----~~~~ 137 (454)
.++..+|. ++++|+.++.+.|.....+.+...+..+.+|+++||+|.+|++......++++..+.++.+. .+..
T Consensus 236 gfs~~l~~~~~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg~rv~~~~f~~~~~~~~~l~~~~~~~~~~~~~~ 315 (417)
T COG2223 236 GFSAYLPMYLVTQFGLSPVTAGLIAFLFPLIGALARPLGGWLSDRIGGRRVTLAVFVGMALAAALLSLFLTGFGHGGSFV 315 (417)
T ss_pred HHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhccchhhhhccchhHHHHHHHHHHHHHHHHHccccccccCcchH
Confidence 44555565 78889999999999999999999999999999999999999999988888888887776541 1344
Q ss_pred HHHHHHHHHHhhcccchhhhhHHHhhhcCccchHHHHHHHHhhHHHHHHhHHhHHHHHhhccC-cchhHHHHhHHHHHHH
Q 012902 138 FLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFG-WPSVFYSFGSLGTVWF 216 (454)
Q Consensus 138 ~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~ig~~l~~~l~~~~g-wr~~f~~~~~~~~~~~ 216 (454)
.+++.-+..++..|.........+..++| ++-|.+.|+.....++|...-|..-+...+..| ++..|++.....+++.
T Consensus 316 ~~~~~~l~l~~~~G~GnGsvfk~Ip~if~-~~~G~v~G~vga~G~lGGf~lp~~~g~~~~~tg~~~~~f~~~~~~~~~a~ 394 (417)
T COG2223 316 VFVAVFLALFVFAGLGNGSVFKMIPVIFP-KETGAVTGIVGAIGGLGGFFLPLAFGVSLDLTGSYTGAFMLLLAFYLVAL 394 (417)
T ss_pred HHHHHHHHHHHHhccCcchheeechHHHH-hhhhHHHHHHHHhccccccchhHHHHHHHHhcccHHHHHHHHHHHHHHHH
Confidence 44444444444444444455677888885 688999999999999999988988888888777 9999999998888887
Q ss_pred HHHHHhc
Q 012902 217 TVWLSKA 223 (454)
Q Consensus 217 ~~~~~~~ 223 (454)
+..+...
T Consensus 395 v~~~~~y 401 (417)
T COG2223 395 VLTWALY 401 (417)
T ss_pred HHHHHHH
Confidence 7665543
No 208
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.22 E-value=1.1e-09 Score=105.00 Aligned_cols=154 Identities=10% Similarity=0.043 Sum_probs=104.3
Q ss_pred HHHhhHHHHHHHHhCCcccchhhHhHHHHHHHHHHHHHHHHHhhhhhhcCccchhhHHHHHHHHHHHHHHHHHHhhccCh
Q 012902 281 ILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDS 360 (454)
Q Consensus 281 ~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (454)
....-+|.. .+.+|.+..+.+...+.+.++..++++..|+++||+|||+.+. .. ..............++
T Consensus 34 ~~~p~l~~i-~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~-------~~--~~~~~~~~~~~~~a~~ 103 (413)
T PRK15403 34 LIQPGIINV-VRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRRPVLI-------TG--ALIFTLACAATLFTTS 103 (413)
T ss_pred hhccCHHHH-HHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCchHHHH-------HH--HHHHHHHHHHHHHcCC
Confidence 334445554 4448999999999999999999999999999999999995332 11 2222222122222233
Q ss_pred h-HHHHHHHHHHHhhhhhhcchhhhhhccc-ccccchhHHHHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHH
Q 012902 361 P-AMAVLCMACSQGTDAFSQSGLYSNHQDI-APRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLV 438 (454)
Q Consensus 361 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~ 438 (454)
. ...+.-++.+.+.. ...+.......+. ++++++++.++.+....++..++|.+.+.+.++.||+..|++.++..++
T Consensus 104 ~~~l~~~r~l~Gi~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~gw~~~f~~~~~~~~i 182 (413)
T PRK15403 104 MTQFLIARFIQGTSIC-FIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHFVHWKVLFAIIAVMGLI 182 (413)
T ss_pred HHHHHHHHHHHHHHHH-HHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Confidence 3 33333344444333 2223333444444 4567899999999999999999999999999989999999998888777
Q ss_pred HHHHHHH
Q 012902 439 GTAVWNL 445 (454)
Q Consensus 439 ~~~~~~~ 445 (454)
+.+...+
T Consensus 183 ~~~~~~~ 189 (413)
T PRK15403 183 AFVGLLL 189 (413)
T ss_pred HHHHHHH
Confidence 7655443
No 209
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.21 E-value=2.9e-10 Score=107.50 Aligned_cols=188 Identities=14% Similarity=0.093 Sum_probs=142.2
Q ss_pred cchHHHHHHHHHHHHHHHHhhhchhhhhcchhhhhhcCCChhhHHHHHHHHHHHHHHhhhhhhhhhccccchHHHHHHHH
Q 012902 40 NSYKQIISLCVGNFEQIFIVFGQVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVV 119 (454)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~ 119 (454)
+.|+.....+.+.+.+ ..-+..........+-++-|++..+..+..........+..+++..+.||+|||+.++.+..
T Consensus 266 ~lR~~~~i~~~v~~~q--q~sGi~ai~~Yst~i~~~aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~gRRpLll~~~~ 343 (485)
T KOG0569|consen 266 TLRRPLLIGIVVSFAQ--QFSGINAIFFYSTSIFKTAGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRLGRRPLLLISLS 343 (485)
T ss_pred chhHHHHHHHHHHHHH--HhcCcceeHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHH
Confidence 4455555555555552 22233334444556788889999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhhhcccc-c-H--H---HHHHHHHHHHhhccc-chhhhhHHHhhhcCccchHHHHHHHHhhHHHHHHhHHhH
Q 012902 120 WWSIATALTPVAAKL-G-L--P---FLLVVRVFMGIGEGV-AMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAF 191 (454)
Q Consensus 120 ~~~~~~~l~~~~~~~-~-~--~---~l~~~r~l~G~~~g~-~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~ig~~l 191 (454)
+..+..+++...... + . | ..+++.++..++.+. .-|...-+.+|.+|++.|..++++......+...+-...
T Consensus 344 ~~~~~~~~~~~~~~l~~~~~~~~~y~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~ 423 (485)
T KOG0569|consen 344 LMAVALLLMSIALFLSNSFGSWLSYLCIAAIFLFIISFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVGFA 423 (485)
T ss_pred HHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHH
Confidence 998888877644310 1 1 1 123444444444332 457778889999999999999999999999988888777
Q ss_pred HHHHhhccCcchhHHHHhHHHHHHHHHHHHhcCCCCCCC
Q 012902 192 SPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHSSPAED 230 (454)
Q Consensus 192 ~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (454)
...+.+.+|- ..|+...+++++..+..++.+||++.+.
T Consensus 424 fp~l~~~~g~-~~filF~i~~~~~~i~~~~~lPETkgr~ 461 (485)
T KOG0569|consen 424 FPPLQNVIGP-YVFILFVIPLAIFLIYLYRYLPETKGRT 461 (485)
T ss_pred HHHHHHHhcc-hhhHHHHHHHHHHHHHHHHhCcccCCCC
Confidence 7777777776 7888889999999999999999986543
No 210
>TIGR00898 2A0119 cation transport protein.
Probab=99.19 E-value=4.8e-10 Score=110.69 Aligned_cols=149 Identities=13% Similarity=-0.018 Sum_probs=115.1
Q ss_pred hhhcCCChhhHHHHHHHHHHHHHHhhhhhhhhhccccchHHHHHHHHHHHHHHhhhhhcccccHHHHHHHHHHHHhhccc
Q 012902 73 SAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMGIGEGV 152 (454)
Q Consensus 73 ~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~r~l~G~~~g~ 152 (454)
.++++.+.. +......+....+.++.+++.||+|||+.+..+.++.+++.++..+.+..+.+...+.-++.+++.+.
T Consensus 350 ~~~~~~~~~---~~~~~~~~~~i~~~~~~~~l~dr~grr~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 426 (505)
T TIGR00898 350 LGNLGGNIY---LDLFISGLVELPAKLITLLLIDRLGRRYTMAASLLLAGVALLLLLFVPVDLYFLRTALAVLGKFGITS 426 (505)
T ss_pred ccccCCChH---HHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHH
Confidence 334444432 33345566777888999999999999999999999999988888777622225555666777777777
Q ss_pred chhhhhHHHhhhcCccchHHHHHHHHhhHHHHHHhHHhHHHHHhhccCcchhHHHHhHHHHHHHHHHHHhcCCCC
Q 012902 153 AMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHSSP 227 (454)
Q Consensus 153 ~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~ig~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~ 227 (454)
.++....+.+|.+|++.|+.++|+.+....+|.+++|.+.+ + +..++..++++.+...++..+..+ ++||+.
T Consensus 427 ~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~ig~~i~p~i~~-~-~~~~~~~~~~~~~~~~~~~~~~~~-~lpet~ 498 (505)
T TIGR00898 427 AFQMVYLYTAELYPTVVRNLGVGVCSTMARVGSIISPFLVY-L-GEKWLFLPLVLFGGLALLAGILTL-FLPETK 498 (505)
T ss_pred HHHHHHHHhcccccHHHHhhhHhHHHHHHHHHHHHHhHHHH-H-HHHHHhhHHHHHHHHHHHHHHHHH-cCcCCC
Confidence 88888999999999999999999999999999999999988 4 345677888888877777755554 456644
No 211
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.18 E-value=3.1e-09 Score=101.49 Aligned_cols=171 Identities=9% Similarity=0.009 Sum_probs=113.2
Q ss_pred hHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCcccchhhHhHHHHHHHHHHHHHHHHHhhhhhhcCccchhhHHHHHHHH
Q 012902 265 VWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIG 344 (454)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~ 344 (454)
++.++...+...+.........|.+ ++.+|.++.+.|++.+...++..++++..|++.||+|+|+.. .....
T Consensus 5 ~~~~~~~f~~~G~~~~~~~~l~~~~-~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~-------~~g~~ 76 (410)
T TIGR00885 5 FALITSLFALWGFANDITNPMVPQF-QQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKAGI-------LLGLF 76 (410)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHH-HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHH-------HHHHH
Confidence 4455556666666665666777766 555899999999999999999999999999999999999432 22222
Q ss_pred HHHHHHHHHH-hhccChhH-HHHHHHHHHHhhhhhhcchhhhhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 012902 345 FLGPAFFLTQ-LSHVDSPA-MAVLCMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQH 422 (454)
Q Consensus 345 ~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~ 422 (454)
....+..... ....++.+ .....++.+.+.+...........+..+++++++..++.+...++|..++|.+.+.+...
T Consensus 77 l~~~g~~l~~~~~~~~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~~~ 156 (410)
T TIGR00885 77 LYALGAFLFWPAAEIMNYTLFLVGLFILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLILS 156 (410)
T ss_pred HHHHHHHHHHHHHhhccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 2222222211 11122333 333344444444444433333344445667899999999999999999999999988533
Q ss_pred --------------------------CCchhHHHHHHHHHHHHHHHH
Q 012902 423 --------------------------GSWDDVFKVSVGLYLVGTAVW 443 (454)
Q Consensus 423 --------------------------~g~~~~~~~~~~~~~~~~~~~ 443 (454)
.+|+.+|.+.+++.++..++.
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~fl~~a~~~~~~~~~~ 203 (410)
T TIGR00885 157 NLPHQSQDVLDKLSPEELSAIKHSDLASVQTPYMIIGAVVLAVALLI 203 (410)
T ss_pred CCccchhhhhhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 258888888777666554444
No 212
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=99.18 E-value=2.5e-08 Score=99.33 Aligned_cols=156 Identities=19% Similarity=0.241 Sum_probs=127.4
Q ss_pred hcchhhhhhcCCChhhHHHHHHHHHHHHHHhhhhhhhhhcc-ccchHHHHHHHHHHHHHHhhhhhcccc------cHHHH
Q 012902 67 IAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADT-VGGKAVLGFGVVWWSIATALTPVAAKL------GLPFL 139 (454)
Q Consensus 67 ~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr-~Grr~~~~~~~~~~~~~~~l~~~~~~~------~~~~l 139 (454)
.....+.+.+|.+.+....+...+....-+...+.|.++|+ +||++.+.++.++..+|.++.+++... .....
T Consensus 9 iLvlYl~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~~~~~~~~~ 88 (654)
T TIGR00926 9 ILVLYFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSGHPLHDLLD 88 (654)
T ss_pred HHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccccchHHHHH
Confidence 34455666789999999889998888888999999999995 899999999999999999888765310 12346
Q ss_pred HHHHHHHHhhcccchhhhhHHHhhhcCcc---chHHHHHHHHhhHHHHHHhHHhHHHHHhhcc-------CcchhHHHHh
Q 012902 140 LVVRVFMGIGEGVAMPAMNNILSKWVPVA---ERSRSLALVYSGMYLGSVTGLAFSPFLIHRF-------GWPSVFYSFG 209 (454)
Q Consensus 140 ~~~r~l~G~~~g~~~~~~~~~i~~~~~~~---~rg~~~~~~~~~~~~g~~ig~~l~~~l~~~~-------gwr~~f~~~~ 209 (454)
+++-.+..+|.|++-|...+...|.++++ +|-..+.++..+.++|..+++++.+++.+.. +|...|.+.+
T Consensus 89 l~gLaLia~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~~~~aF~i~~ 168 (654)
T TIGR00926 89 LLGLALIALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDCYPLAFGVPA 168 (654)
T ss_pred HHHHHHHHhhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHHH
Confidence 67788899999999999999999999754 3677889999999999999999999887443 6999999988
Q ss_pred HHHHHHHHHHHHh
Q 012902 210 SLGTVWFTVWLSK 222 (454)
Q Consensus 210 ~~~~~~~~~~~~~ 222 (454)
+..++..++....
T Consensus 169 i~m~ia~lvf~~g 181 (654)
T TIGR00926 169 ILMILALIVFMAG 181 (654)
T ss_pred HHHHHHHHHHHHh
Confidence 8888776655443
No 213
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.16 E-value=5.2e-10 Score=121.59 Aligned_cols=143 Identities=15% Similarity=0.193 Sum_probs=123.0
Q ss_pred hhhhhhcCCChh-hHHHHHHHHHHHHHHhhhhhhhhhccccchHHHHHHHHHHHHHHhhhhhcccccHHHHHHHHHHHHh
Q 012902 70 LPMSAEFNWNPA-TVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMGI 148 (454)
Q Consensus 70 ~~i~~~~~~s~~-~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~r~l~G~ 148 (454)
+.+.+++|.+.. +.+++.+...++..+++++.|++.||+++|+.+.++.++.+++.++..+.+ +.+.+++..++.|+
T Consensus 257 ~~~~~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~g~ 334 (1146)
T PRK08633 257 AYAKEVLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRHIELGLVPLGALGLALSLFLLPTAP--SLASVLVLFFLFGF 334 (1146)
T ss_pred HHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEccchhHHHHHHHHHHHHHHHhh--hHHHHHHHHHHHHH
Confidence 345677899988 999999999999999999999999999999999999988888888888888 88888899999999
Q ss_pred hcccchhhhhHHHhhhcCccchHHHHHHHHhhHHHHHHhHHhHHHHHhh-ccCcchhHHHHhHHHHH
Q 012902 149 GEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIH-RFGWPSVFYSFGSLGTV 214 (454)
Q Consensus 149 ~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~ig~~l~~~l~~-~~gwr~~f~~~~~~~~~ 214 (454)
+.+...+...+++.+..|+++||+++|+.+....+|..+++.+++.+.. .+++...|++.+.+.++
T Consensus 335 ~~~~~~~~~~~~~~~~~p~~~rg~~~~~~~~~~~lg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 401 (1146)
T PRK08633 335 SAGLFIVPLNALIQFRAPEKELGKVLAANNFLQNVGMLLFLALTTLFSGLGLSPAGLFYLIALVTLI 401 (1146)
T ss_pred HHHHhhHHHHHHHhhcCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHH
Confidence 9999889999999999999999999999999999999888888777654 23455566665554443
No 214
>PRK09848 glucuronide transporter; Provisional
Probab=99.16 E-value=5.7e-10 Score=108.26 Aligned_cols=134 Identities=18% Similarity=0.135 Sum_probs=108.0
Q ss_pred cchh-hhhhcCCChhhHHHHHHHHHHHHHHhhhhhhhhhccccchHHHHHHHHHHHHHHhhhhhcccccHHHHHHHHHHH
Q 012902 68 AILP-MSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFM 146 (454)
Q Consensus 68 ~~~~-i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~r~l~ 146 (454)
..|. +++.+|.++...++......++..++.++++++.||+|+|+++..+.++..++.++..+.+..+.+.+.+..++.
T Consensus 250 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~l~ 329 (448)
T PRK09848 250 SSLFYVRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKNTFLIGALLGTCGYLLFFWVSVWSLPVALVALAIA 329 (448)
T ss_pred hheeeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCchhHHHHHHHHHHH
Confidence 3444 344567665555555555567788899999999999999999999999888888777765433567777788899
Q ss_pred HhhcccchhhhhHHHhhhcCcc-------chHHHHHHHHhhHHHHHHhHHhHHHHHhhccCc
Q 012902 147 GIGEGVAMPAMNNILSKWVPVA-------ERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGW 201 (454)
Q Consensus 147 G~~~g~~~~~~~~~i~~~~~~~-------~rg~~~~~~~~~~~~g~~ig~~l~~~l~~~~gw 201 (454)
|+|.+...+...++.+|..|.+ ++|...|..+....+|..+|+.+.+.+.+..|+
T Consensus 330 g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg~aig~~i~g~~l~~~G~ 391 (448)
T PRK09848 330 SIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGSIPAFILGLSGY 391 (448)
T ss_pred HHHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 9999999999999999988654 459999999999999999999999998877666
No 215
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=99.14 E-value=1.9e-09 Score=100.35 Aligned_cols=180 Identities=11% Similarity=0.028 Sum_probs=130.6
Q ss_pred HhhcCcchHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCcccchhhHhHHHHHHHHHHHHHHHHHhhhhhhcCccchhhH
Q 012902 258 LILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVR 337 (454)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~ 337 (454)
.++.++....+.+...+..++...+.+++=-+++| .+-.+..-|......-.+.++.-+..+++.+|+|+-+++..+
T Consensus 366 ~~~~s~~~llff~~av~mG~g~~lv~tFLfWHled-~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv~v~~lg-- 442 (618)
T KOG3762|consen 366 KVFASPHILLFFFVAVVMGAGVGLVFTFLFWHLED-LGGIKTLFGVVSALCHAGEILFYFFSFKLIEKIGHVNVMYLG-- 442 (618)
T ss_pred HHhcCCCEEehhHHHHHHHHHHHHHHHHHHHHHhh-cCCcceeeeehhhhhccchHHHHHHHHHHHHHhcccceeeeh--
Confidence 46778888887788888888888888888888888 476777778777777788899999999999999999755422
Q ss_pred HHHHHHHHHHHHHHHHHhhccChhHHHHH-HHHHHHhhhhhhcchhhhhhcccccccchhHHHHHHHH-HHHHHHHHHHH
Q 012902 338 KIMQSIGFLGPAFFLTQLSHVDSPAMAVL-CMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTA-GVLAGVFGTAA 415 (454)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~g~~~~~~~ 415 (454)
+.+...=++....-.++|.+.- =.+-+.............+....||+.++++.|+.... ..+|-.+|..+
T Consensus 443 -------La~~~~Rf~~~S~L~n~W~vLPieilqgit~aliWaa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslI 515 (618)
T KOG3762|consen 443 -------LACNVGRFLYYSYLQNPWMVLPIEILQGITHALIWAAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLI 515 (618)
T ss_pred -------hhHHHHHHHHHHHhcCchheeeHHHHHHHHHHHHHHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhh
Confidence 2222222222333344444433 34444444555555555555667888999999998854 57899999999
Q ss_pred HHHHhccCCchhHHHHHHHHHHHHHHHHHHhc
Q 012902 416 TGYILQHGSWDDVFKVSVGLYLVGTAVWNLFS 447 (454)
Q Consensus 416 ~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 447 (454)
+|.+.+..+-+..|...++.+++.++......
T Consensus 516 GG~~v~~fg~~ttf~~~giAcl~~l~~~~~iq 547 (618)
T KOG3762|consen 516 GGFVVERFGARTTFRIFGIACLVTLALFISIQ 547 (618)
T ss_pred hhhhheeehhHHHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999998888887777666543
No 216
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=99.14 E-value=1.4e-08 Score=90.39 Aligned_cols=364 Identities=13% Similarity=-0.009 Sum_probs=201.5
Q ss_pred cchHHHHHHHHHHHHHHHHhhhchhhhhcchhhhhhcCCChhhHHHHHHHHHHHHHHhhhhhhhhhc-----cccchHHH
Q 012902 40 NSYKQIISLCVGNFEQIFIVFGQVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWAD-----TVGGKAVL 114 (454)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~d-----r~Grr~~~ 114 (454)
..+..+..++++... .+.-.+... .+|.+.+.=|.|.++.+...-++ .. ..--++|.++.| |+||||..
T Consensus 28 ~d~~~illLl~LYll---QGiP~GL~~-~iP~lL~ak~vSyt~~a~fS~ay-~P-~sLKllWaPiVDs~y~k~~GrrksW 101 (510)
T KOG3574|consen 28 GDRSSILLLLFLYLL---QGIPLGLIG-AIPLLLQAKGVSYTSQAIFSFAY-WP-FSLKLLWAPIVDSVYSKRFGRRKSW 101 (510)
T ss_pred hhhhhHHHHHHHHHH---cCCchhHhh-hhHHHhcCCCcchhhhhhhhhhh-hH-HHHHHHHHhhhHHHHHHhhccccce
Confidence 344455555555444 777777777 88998888888888776543332 22 234678999999 99999874
Q ss_pred HH-HHHHHHHHHhhhhhcc---------cccHHHHHHHHHHHHhhcccchhhhhHHHhhhcCccchHHHHHHHHhhHHHH
Q 012902 115 GF-GVVWWSIATALTPVAA---------KLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLG 184 (454)
Q Consensus 115 ~~-~~~~~~~~~~l~~~~~---------~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g 184 (454)
+. ...+.+..+.+.+... .++...+...-++.-+..+....+.-.+.-....+++.|.+......+.+.|
T Consensus 102 vvp~q~llG~~mllLs~~v~~~~g~ng~~p~v~~lt~~f~LLnflaAtQDIAVDgwALtmLs~e~lgyaST~q~Vg~~~G 181 (510)
T KOG3574|consen 102 VVPCQYLLGLFMLLLSYLVDRGLGGNGGLPNVVALTLLFLLLNFLAATQDIAVDGWALTMLSRENLGYASTCQSVGQTAG 181 (510)
T ss_pred eeehHHHHHHHHHHHhhCCCcccccCCCCcchHHHHHHHHHHHHHHhhhhhhhhHHHHHhcCHhhcCchhHHHHHHHhhh
Confidence 33 2233333333322211 1133333334455566667777777788778888899888888877777777
Q ss_pred HHhHHhHHHHHhh-------ccCcc---------hhHHHHhHHHHHHHHHHHHhcCCCCCCCCCCChhhhhhhhhccccC
Q 012902 185 SVTGLAFSPFLIH-------RFGWP---------SVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASK 248 (454)
Q Consensus 185 ~~ig~~l~~~l~~-------~~gwr---------~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (454)
..++..+--.+.+ ..+|. ...+..+.+..+.-.+..+..+|.+++ ..++.+...
T Consensus 182 yfL~~~ifLaL~s~dF~N~y~rs~P~~~g~ItL~gy~~fwg~~~~vat~Lv~~~kke~~~~--~~~e~~~~i-------- 251 (510)
T KOG3574|consen 182 YFLGNVVFLALESPDFCNTYLRSIPLDQGFITLAGYLWFWGALFIVATTLVALLKKENDES--VDEELELGI-------- 251 (510)
T ss_pred HHhhcceeeEecChhhhhHHHhcCcCccceEEhhHHHHHHHHHHHHHHHHHHHhcCCCchh--hhhhhhcCH--------
Confidence 7777554333322 11333 123334444444444444444443322 111111100
Q ss_pred CCCCCcchhHhhcCcchHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCcccchhhHhHHHHHHHHHHHHHHHHHhhhhhh
Q 012902 249 EPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVS 328 (454)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~ 328 (454)
.....-++++++-|.+..++......-.++.+-....+.-+.| .|.+.++-+++.....-.+++.....|++..+.
T Consensus 252 -~~~yk~l~~vLklk~v~~la~i~lt~K~gf~a~da~t~LkLle-~Gv~ke~Lal~~v~~~plqI~l~~~~gk~ta~~-- 327 (510)
T KOG3574|consen 252 -HESYKLLRDVLKLKSVRWLAGILLTGKLGFQAADALTSLKLLE-HGVPKEELALIAVPLVPLQIALPLYIGKWTAGP-- 327 (510)
T ss_pred -HHHHHHHHHHHcCccHHHHHHHHHHHHHHhhhhhhccchHHHH-cCCChhHheeeeeehhhHHHhhhhhheeecCCC--
Confidence 0002245667888999988888888888888888888888888 599988887776544444444444444443321
Q ss_pred cCccchhhHHHHHHHHHHHHHHHH-HHhhc-cC---h-h-HHHHHHH---HHHHhh-hhhhcchhhhhhcccccccchhH
Q 012902 329 KGLSVTTVRKIMQSIGFLGPAFFL-TQLSH-VD---S-P-AMAVLCM---ACSQGT-DAFSQSGLYSNHQDIAPRYSGVL 397 (454)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~---~-~-~~~~~~~---~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 397 (454)
|+... -.+....-+........+ ..... .. . + ...+... .+..++ .........-.++..+|...|+.
T Consensus 328 ~pl~~-~lka~~~R~~~~~~~t~Lv~~~~~~~~~~G~~~~~~~il~i~~y~~~~~~~ts~fv~~maf~aqisdp~iggTy 406 (510)
T KOG3574|consen 328 RPLNV-FLKAVPYRLGGGLVQTALVWWTPTLGHSDGTFPRGYYILLITSYAFHQVFVTSMFVSGMAFHAQISDPAIGGTY 406 (510)
T ss_pred CcchH-HHHhhhHHHHHHHHHHHHHhhhcccccCCCceeechHHHHHHHHHHhhhHHHHHHHHHHHHHhhcCCcccCccH
Confidence 11111 111111111111111111 11111 11 0 1 1111111 111111 11222222223345567889999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhccCC
Q 012902 398 LGLSNTAGVLAGVFGTAATGYILQHGS 424 (454)
Q Consensus 398 ~g~~~~~~~~g~~~~~~~~g~l~~~~g 424 (454)
+.+.|+..++|+--=..+...+.|..+
T Consensus 407 mTlLNTLsnLGg~wp~tv~l~l~D~lt 433 (510)
T KOG3574|consen 407 MTLLNTLSNLGGNWPGTVALWLADGLT 433 (510)
T ss_pred HHHHHHHHHhcCCcHHHHHHHhcccCc
Confidence 999999999999888889999988744
No 217
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=99.14 E-value=5.1e-08 Score=90.04 Aligned_cols=320 Identities=13% Similarity=0.120 Sum_probs=178.3
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhhccccchHHHHHHHHHHHHHHhhhhhcccccHHHHHHHHHHHHhhcccchhhhhHHHh
Q 012902 83 VGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILS 162 (454)
Q Consensus 83 ~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~ 162 (454)
.+.+.-+-.+...+..+.+.++.+|+..+.=.....++..++.++.++++ |.+.=+++-++.+++.|........+.
T Consensus 61 t~~Vlladi~P~l~~Kl~aP~fi~~v~y~~Ri~~~~~l~~~g~l~va~~~--~v~~~l~Gv~las~ssg~GE~tfL~lt- 137 (402)
T PF02487_consen 61 TGAVLLADILPSLLVKLIAPFFIHRVPYWIRILICVALSAAGMLLVAFSP--SVWVRLLGVVLASLSSGLGEVTFLSLT- 137 (402)
T ss_pred chHHHHHHHHHHHHHHHHhHhhhhhccchHHHHHHHHHHHHHHhheeecc--chhHHHHHHHHHhhhhhhhHHHHHHHH-
Confidence 34455566667777778888899998866666667778999999999999 999999999999999998888877764
Q ss_pred hhcCccchHHHHHHHHhhHHHHHHhHHhHHHHHhhccCc--chhHHHHhHHHHHHHHHHHHhcCCCCCCCCCCChhh---
Q 012902 163 KWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGW--PSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAE--- 237 (454)
Q Consensus 163 ~~~~~~~rg~~~~~~~~~~~~g~~ig~~l~~~l~~~~gw--r~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 237 (454)
..+++ ..++-++++.+.++++|+..-..+.+ .|+ |..+++...++++..+..++.+|+++.+++..+.++
T Consensus 138 ~~y~~----~~l~~wssGTG~aGl~Ga~~y~~lT~-~g~s~~~tll~~~~lp~~~~~~~f~~L~~~~~~~~~~~~~~~~~ 212 (402)
T PF02487_consen 138 HFYGK----SSLSAWSSGTGGAGLVGALYYLGLTT-LGLSPRTTLLIMLVLPAIFLLSYFFLLPSPPTNRPYQESESEDE 212 (402)
T ss_pred HhcCc----cccccccCCcChhhHHHHHHHHHHHH-hCcCHHHHHHHHHHHHHHHHHHHHHhhccccccCCCcccCCCCc
Confidence 45643 35788999999999999988777776 555 778888887777766655655554432221111100
Q ss_pred --hhhhhhccccCC--CCCCcchhHhhc-CcchHHHHHHHHHHHHHHHHHHh-hHHHHHHHHhCCc-ccchhhHhHHHHH
Q 012902 238 --KKLIVSSCASKE--PVKTIPWGLILS-KPPVWALIVSHFCHNWGTFILLT-WMPTYYNQVLHFN-LTESGLFCVLPWL 310 (454)
Q Consensus 238 --~~~~~~~~~~~~--~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~g~s-~~~~~~~~~~~~~ 310 (454)
.+...++..+.+ ...+..+++-++ -|......+-.+..++..+.++. ..|...-..-..+ ..+--+....+.+
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~k~Ll~ymiPL~lVY~aEY~InqGv~~tl~fp~~~~~~r~~Y~~Y~~~YQ~ 292 (402)
T PF02487_consen 213 AEDDLLESETSESKPDSSSKLSFKEKLKRLKPLLWYMIPLFLVYFAEYFINQGVAPTLLFPNSFFSPRDQYRWYQLLYQL 292 (402)
T ss_pred ccccccccccccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHhcCCccCCCHHHHHHHHHHHHHH
Confidence 000001111111 111222222221 12222233333333334333322 2222211111111 2223344555666
Q ss_pred HHHHHHHHHHHHhhhhhhcCccchhhHHHHHHHHHHHHHHHHHHhhccChhHH-HHHHHHHHHhhhhhhcchhhhhhccc
Q 012902 311 TMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAM-AVLCMACSQGTDAFSQSGLYSNHQDI 389 (454)
Q Consensus 311 ~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (454)
+..+++--...+ |+ |++.... .+..+-++....-. .....++.+. +..++..|..++.........+.++.
T Consensus 293 GVFISRSS~~~~--ri--r~lwils---~LQ~~nl~~~~l~s-~~~fipsi~ivf~lif~eGLlGGa~YVNtF~~I~~~~ 364 (402)
T PF02487_consen 293 GVFISRSSLPFF--RI--RRLWILS---LLQVINLVFLLLQS-WYRFIPSIWIVFVLIFYEGLLGGASYVNTFYRISEEV 364 (402)
T ss_pred HHhhhhcceeee--eh--hhHHHHH---HHHHHHHHHHHHHH-HHHHhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHhcC
Confidence 655555433221 22 2211110 11111111111111 1111233333 34445556666666666666677888
Q ss_pred ccccchhHHHHHHHHHHHHHHHHHHHHHH
Q 012902 390 APRYSGVLLGLSNTAGVLAGVFGTAATGY 418 (454)
Q Consensus 390 ~~~~~~~~~g~~~~~~~~g~~~~~~~~g~ 418 (454)
++++|-.++|.....-.+|..++..++=.
T Consensus 365 ~~~~REFslg~vsvsds~GI~lAgll~l~ 393 (402)
T PF02487_consen 365 PPEDREFSLGAVSVSDSLGILLAGLLGLP 393 (402)
T ss_pred CHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 88999999999888888887777766543
No 218
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.13 E-value=9.4e-10 Score=119.25 Aligned_cols=146 Identities=12% Similarity=0.052 Sum_probs=120.1
Q ss_pred cchh-hhhhcCCChhhHHHHHHHHHHHHHHhhhhhhhhhccccchHHHHHHHHHHHHHHhhhhhc---------------
Q 012902 68 AILP-MSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVA--------------- 131 (454)
Q Consensus 68 ~~~~-i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~l~~~~--------------- 131 (454)
..|. +.+.+|.++.+.|++.+.+.++..+++++.|+++|+.++++.+..+.++.+++.+..++.
T Consensus 247 ~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 326 (1140)
T PRK06814 247 QLPLLAKETLGGDENVATLFLAVFSVGVAVGSFLASKLSEGRITLLYVPIGALLMGLFGLDLAFASSSVPAEPAQLKSIL 326 (1140)
T ss_pred HhHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCceeeeeehHHHHHHHHHHHHHHhcccccccccccccchh
Confidence 4555 455689999999999999999999999999999998888777666666666555544442
Q ss_pred -----ccccHHHHHHHHHHHHhhcccchhhhhHHHhhhcCccchHHHHHHHHhhHHHHHHhHHhHHHHHhh-ccCcchhH
Q 012902 132 -----AKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIH-RFGWPSVF 205 (454)
Q Consensus 132 -----~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~ig~~l~~~l~~-~~gwr~~f 205 (454)
+ +.+.++++.++.|++.+...+...+++.+.+|+++||+++|..+....+|..+++++++.+.+ ..++...+
T Consensus 327 ~~~~~~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~G~v~g~~~~~~~~~~~ig~~~~g~l~~~~~~~~~~~ 404 (1140)
T PRK06814 327 VFLSKR--HGWRILIDLFGLAAAGGLYIVPLFAALQAWANPAHRARVIAANNVLNAAFMVAGTIILALLQALGFSIPWII 404 (1140)
T ss_pred hhhccc--ccHHHHHHHHHHHHHHHHhHHHHHHHHHhhCCcccceeeeHHHHHHHHHHHHHHHHHHHHHHHhccCHHHHH
Confidence 5 678888899999999999999999999999999999999999999999999999999998874 45667777
Q ss_pred HHHhHHHHHH
Q 012902 206 YSFGSLGTVW 215 (454)
Q Consensus 206 ~~~~~~~~~~ 215 (454)
++.+.+.++.
T Consensus 405 ~~~~~~~~~~ 414 (1140)
T PRK06814 405 LFIALANLIV 414 (1140)
T ss_pred HHHHHHHHHH
Confidence 6655544443
No 219
>PRK10133 L-fucose transporter; Provisional
Probab=99.12 E-value=8.3e-09 Score=99.45 Aligned_cols=148 Identities=11% Similarity=0.088 Sum_probs=97.8
Q ss_pred chHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCcccchhhHhHHHHHHHHHHHHHHHHHhhhhhhcCccchhhHHHHHHH
Q 012902 264 PVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSI 343 (454)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~ 343 (454)
.+..+.+..+...+.........|.+ ++.+|.|+.+.++..+.+.++..++.+..|++.||+|+|+... ...
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~p~i-~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l~-------~g~ 98 (438)
T PRK10133 27 PFALLCSLFFLWAVANNLNDILLPQF-QQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGII-------TGL 98 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHH-------HHH
Confidence 34455566666666777777788877 6668999999999999999999999999999999999995332 222
Q ss_pred HHHHHHHHHHH-hhccChhHH-HHHHHHHHHhhhhhhcchhhhhhcccccc-cchhHHHHHHHHHHHHHHHHHHHHHHHh
Q 012902 344 GFLGPAFFLTQ-LSHVDSPAM-AVLCMACSQGTDAFSQSGLYSNHQDIAPR-YSGVLLGLSNTAGVLAGVFGTAATGYIL 420 (454)
Q Consensus 344 ~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~g~~~~~~~~g~l~ 420 (454)
.....+..... ....++... ....++.+.+.+......... ..+.+|+ +++...++.+....+|..++|.+.+.+.
T Consensus 99 ~~~~~~~~l~~~~~~a~~~~~ll~~r~l~G~g~g~~~~~~~~~-v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~~l~ 177 (438)
T PRK10133 99 FLYALGAALFWPAAEIMNYTLFLVGLFIIAAGLGCLETAANPF-VTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLI 177 (438)
T ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhhHHHH-HHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22222221111 122333333 333444454444444333333 3355665 4556799999999999999999887654
No 220
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=99.11 E-value=5.2e-08 Score=91.53 Aligned_cols=315 Identities=13% Similarity=0.043 Sum_probs=185.2
Q ss_pred HHHHHHHHHHhhhhhhhhhccccchHHHHHHHHHHHHHHhhhhhcccccHHHHHHHHHHHHhhcccchhhhhHHHhhhcC
Q 012902 87 QSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVP 166 (454)
Q Consensus 87 ~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~ 166 (454)
.++....+.+..++.+.+.|+.|.|+.++++...+..-.+.+-+- |-+-++....+.|+|.+..+...-.+++|..+
T Consensus 56 ~aiiY~~ftv~~l~~psiv~~i~~K~~lv~ga~~y~~f~~gfl~~---N~y~~yfssallG~Gaallw~GqG~ylt~~st 132 (461)
T KOG3098|consen 56 QAIIYAFFTVSCLFAPSIVNFLGPKWALVIGATCYAAFPLGFLFP---NSYYLYFSSALLGFGAALLWTGQGGYLTSNST 132 (461)
T ss_pred HHHHHHHHHHHHHhhHHHHHHhhHHHHHHHHhHHHHHHHHHHHhc---chHHHHHHHHHhhhhHHheecccceehhhcCC
Confidence 677788889999999999999999999999999998888777655 45678899999999999999999999999999
Q ss_pred ccchHHHHHHHHhhHHHHHHhHHhHHHHHhhc--------cCcc-h----------hHHHHhHHHHHHHHHHH--HhcCC
Q 012902 167 VAERSRSLALVYSGMYLGSVTGLAFSPFLIHR--------FGWP-S----------VFYSFGSLGTVWFTVWL--SKAHS 225 (454)
Q Consensus 167 ~~~rg~~~~~~~~~~~~g~~ig~~l~~~l~~~--------~gwr-~----------~f~~~~~~~~~~~~~~~--~~~~~ 225 (454)
+|++.+..++..+....+..+|..+-..+..+ .+-+ . ...+.+++..+..+... .+.|.
T Consensus 133 ~~tie~Nisi~Wai~~~~li~Ggi~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~~~~~l~~i~~~~~p~ 212 (461)
T KOG3098|consen 133 RETIERNISIFWAIGQSSLIIGGIILFIYFQFSSSSAIITDGTRRLVFEVLFIDFEIKVLFGVLLAISVLSIINFDFLPS 212 (461)
T ss_pred hhhHHHHHHHHHHHHHHHHHhhhHhheeeeEecccccccccchhhhhcchhhhhHHHHHHHHHHHHHHHHHhhheeecCc
Confidence 99999999999998888888886554433221 1111 0 11111111111111111 11111
Q ss_pred CCCCCCCCChhhhhhhhhccccCCCCCCcchhHhhcCcchHHHHHHHHHHHHHHHHHHhhHHHHHHHH--hCC-cccchh
Q 012902 226 SPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQV--LHF-NLTESG 302 (454)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~g~-s~~~~~ 302 (454)
+...... +..+... .+.....-..+++|++..+....+..++...-+....|..+.-. .+. +....+
T Consensus 213 ~~~~~~~-~~~~~~~---------~~~l~~~~~l~~~~~ml~L~~~f~~tG~~~Sf~~~iypt~i~ft~~~~~n~~~~~a 282 (461)
T KOG3098|consen 213 KDVVNCK-SSSETSF---------SELLKLTFKLLKTPKMLLLFPFFFYTGLETSFWISIYPTCISFTRKLGSNTTYLIA 282 (461)
T ss_pred cchhhhh-hhccccH---------HHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHhccchhhhhhhhccCcchhHHH
Confidence 1100000 0000000 00011122356788888777776666666555666666654433 222 223335
Q ss_pred hHhHHHHHHHHHHHHHHHHHhhhhhhcCccchhhHHHHHHHHHHHHHHHHHH--hhccC--------------hhHHHHH
Q 012902 303 LFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQ--LSHVD--------------SPAMAVL 366 (454)
Q Consensus 303 ~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~--------------~~~~~~~ 366 (454)
+.....+++.+++....+.+.||.++...... ......+......+.. .+... .......
T Consensus 283 i~~~~~g~g~v~~g~~~~~l~~rir~fg~~~~----~~~~~~~~~~~~~li~l~~p~dap~~~t~~~~~~~~~~~~~~~i 358 (461)
T KOG3098|consen 283 IYSIGIGLGEVIGGLDFSILSKRIRGFGRKPT----VLIGIIIHLIGFLLIHLSFPNDAPLRPTDSPPLLFTPSYYLALI 358 (461)
T ss_pred HHHHHHhHHHHHHHHHHHHHhhhhhhcccCcc----hhHHHHHHHHHHHHHhccccccCCCCCCcccccccccchhHHHH
Confidence 55556667777777777777777654432221 1111111111111111 11111 1223334
Q ss_pred HHHHHHhhhhhhcchhhhhhcccccccchhHHHHHHHHHHHHHHHHHHHHHH
Q 012902 367 CMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGY 418 (454)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~ 418 (454)
+..+.+..................|++|.++.++...-..++..++-...+.
T Consensus 359 i~~l~G~~D~~~~t~~~~ii~~~~~~~~~~~fsi~kfyq~~~s~v~~f~~~~ 410 (461)
T KOG3098|consen 359 IGFLLGFGDACFNTQRYVIIALLYPDDRAQAFSLFKFYQSVASCVAFFFSPY 410 (461)
T ss_pred HHHHHhhHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHhhhhhh
Confidence 4444444555555666666666678889888888887777777665555543
No 221
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.09 E-value=1.9e-09 Score=86.20 Aligned_cols=136 Identities=15% Similarity=0.111 Sum_probs=88.7
Q ss_pred hHHHHHHHHHHHHHHHHHhhhhhhcCccchhhHHHHHHHHHHHHHHHHHHhhccChhHHHHHHHHHHHhhhhhhcchhhh
Q 012902 305 CVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLCMACSQGTDAFSQSGLYS 384 (454)
Q Consensus 305 ~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (454)
.....++..++.+..+++.||++||+... ............. ....+.........+.+.+...........
T Consensus 4 ~~~~~~~~~~~~~~~g~~~d~~g~~~~~~-------~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 75 (141)
T TIGR00880 4 LAGYALGQLIYSPLSGLLTDRFGRKPVLL-------VGLFIFVLSTAMF-ALSSNITVLIIARFLQGFGAAFALVAGAAL 75 (141)
T ss_pred EEeehhHHHHHHhhHHHHHhhcchhHHHH-------HHHHHHHHHHHHH-HHhccHHHHHHHHHHHHHHHHHHHHhHHHH
Confidence 44556788899999999999999985322 1111111111111 112222333333344444433333333333
Q ss_pred hhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHHHHhcc
Q 012902 385 NHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWNLFST 448 (454)
Q Consensus 385 ~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 448 (454)
..+..++++|+++.++.+....++..++|.+.+.+.+..+|+..+++.+...+++.+......+
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (141)
T TIGR00880 76 IADIYPPEERGVALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAAFILLAFLLP 139 (141)
T ss_pred HHHHCChhhhhHHHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHHHHHHhhcCC
Confidence 4455566789999999999999999999999999999999999998888877777666555544
No 222
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.08 E-value=2.6e-09 Score=104.19 Aligned_cols=138 Identities=10% Similarity=0.013 Sum_probs=107.1
Q ss_pred hhhhcchhhhhhcCCChhhHHHHHHHHHHHHHHhhhhhhhhhccccchHHHHHHHHHHHHHHhhhhh---cccccHHHHH
Q 012902 64 NMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPV---AAKLGLPFLL 140 (454)
Q Consensus 64 ~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~l~~~---~~~~~~~~l~ 140 (454)
......+.+.++...+....+++.+...++..++.+++++++||+|+|+.+..+.++..++.+...+ .+..+.+.++
T Consensus 249 ~~~~~~~y~~~y~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (473)
T PRK10429 249 IINGFAIYYFTYVIGDADLFPYYLSYAGAANLVTLILFPRLVKSLSRRILWAGASIFPVLSCGVLLLMGLAAPHNALLIV 328 (473)
T ss_pred HHhhheeeEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCchhHHHHH
Confidence 3344444555544445667778888888999999999999999999999998888776666555432 1111567777
Q ss_pred HHHHHHHhhcccchhhhhHHHhhhcC-------ccchHHHHHHHHhhHHHHHHhHHhHHHHHhhccCc
Q 012902 141 VVRVFMGIGEGVAMPAMNNILSKWVP-------VAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGW 201 (454)
Q Consensus 141 ~~r~l~G~~~g~~~~~~~~~i~~~~~-------~~~rg~~~~~~~~~~~~g~~ig~~l~~~l~~~~gw 201 (454)
+.-++.|++.+...+...++++|..+ +++.|..+|......-+|..+++.+.|.+.+..|+
T Consensus 329 i~~~l~g~~~~~~~~~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~al~~~i~g~~l~~~Gy 396 (473)
T PRK10429 329 IAGILLNIGTALFWVLQVIMVADTVDYGEYKLGIRCESIAYSVQTMVVKGGSAFAAFFIGVVLGLIGY 396 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhhhhHhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 88889999999999999999999965 34456689999999999999999999999887766
No 223
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.08 E-value=1.1e-08 Score=95.74 Aligned_cols=158 Identities=12% Similarity=0.001 Sum_probs=107.2
Q ss_pred HhhHHHHHHHHhCCcccc-hhhHhHHHHHHHHHHHHHHHHHhhhhhhcCccchhhHHHHHHHHHHHHHHHHHHhhccChh
Q 012902 283 LTWMPTYYNQVLHFNLTE-SGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSP 361 (454)
Q Consensus 283 ~~~~~~~l~~~~g~s~~~-~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (454)
..+...++.+.+|++..+ .|.+...+..+..+..+..|+++||+|.|+.+ ..+.+.-.+........++.
T Consensus 45 ~s~a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL---------~l~~l~Wsl~t~L~~fa~Sl 115 (511)
T TIGR00806 45 ESFITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVL---------VLQALSFVCVWLLLLLGTSV 115 (511)
T ss_pred HHHHHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHHH---------HHHHHHHHHHHHHHHHHHHH
Confidence 344555676679999999 99999999999999999999999999999432 22222222222222222223
Q ss_pred -HHHHHHHHHHHhhhhhhcchhhhhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHhccCCchh---HHHHHHHHHH
Q 012902 362 -AMAVLCMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDD---VFKVSVGLYL 437 (454)
Q Consensus 362 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~---~~~~~~~~~~ 437 (454)
...+.=+++|.+-+... .....+..-+|+++|+++.|+.+....+|.++++++.+.+. ..||+. ..++......
T Consensus 116 ~~L~i~R~llGvaEA~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~qll~-s~gWr~y~~Ln~Isl~s~~ 193 (511)
T TIGR00806 116 WHMQLMEVFYSVTMAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQLLV-TLGWISYSTLNIISLVFMT 193 (511)
T ss_pred HHHHHHHHHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcCchhHHHHHHHHHHHHH
Confidence 33334444455544444 55555556778899999999999999999999999999944 556654 3445555556
Q ss_pred HHHHHHHHhccCCc
Q 012902 438 VGTAVWNLFSTGEK 451 (454)
Q Consensus 438 ~~~~~~~~~~~~~~ 451 (454)
++.++.+++++.+|
T Consensus 194 ~a~~~a~~LP~~~~ 207 (511)
T TIGR00806 194 FSVFLALFLKRPKR 207 (511)
T ss_pred HHHHHHHhCCCCch
Confidence 66666666654443
No 224
>PRK09669 putative symporter YagG; Provisional
Probab=99.06 E-value=2.1e-09 Score=104.20 Aligned_cols=124 Identities=11% Similarity=0.119 Sum_probs=97.7
Q ss_pred ChhhHHHHHHHHHHHHHHhhhhhhhhhccccchHHHHHHHHHHHHHHhhhhhcccccHHHHHHHHHHHHhhcccchhhhh
Q 012902 79 NPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMN 158 (454)
Q Consensus 79 s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~ 158 (454)
+++..+.+.....+...++.+++++++||+|+|+.+..+.++.++......+.+..+.+.+++..++.|++.+...+...
T Consensus 262 ~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~ 341 (444)
T PRK09669 262 RPDLATLFLVTGMIAGLFGALLSERLLGKFDRVRAFKWTIVAFVILSALIFFIPPSNVWLIFALNILFNFIQNLTTPLQW 341 (444)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34445566667778888999999999999999999988887666544433222212677788888999999999999999
Q ss_pred HHHhhhcC-------ccchHHHHHHHHhhHHHHHHhHHhHHHHHhhccCcc
Q 012902 159 NILSKWVP-------VAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWP 202 (454)
Q Consensus 159 ~~i~~~~~-------~~~rg~~~~~~~~~~~~g~~ig~~l~~~l~~~~gwr 202 (454)
++++|..+ +++.|...|.......+|..+|+.+++.+.+..|+.
T Consensus 342 am~ad~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~i~g~ll~~~Gy~ 392 (444)
T PRK09669 342 SMFSDVVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGAVVGWILAWVDYV 392 (444)
T ss_pred HHHHhhhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 99999875 233467889999999999999999999998877773
No 225
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=99.03 E-value=9.9e-09 Score=94.15 Aligned_cols=158 Identities=28% Similarity=0.514 Sum_probs=128.8
Q ss_pred HhhhchhhhhcchhhhhhcCCCh--hhHHHHHHHHHHHHHHhhhhhhhhhccccchHHHHHHHHHHHHHHhhhhhccccc
Q 012902 58 IVFGQVNMSIAILPMSAEFNWNP--ATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLG 135 (454)
Q Consensus 58 ~~~~~~~~~~~~~~i~~~~~~s~--~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~l~~~~~~~~ 135 (454)
...+........+.+.++++.+. .+.++..+.+.++..++.++.|.+.||+|||+.+..+......+.+++++....+
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (338)
T COG0477 14 LGLDLGLLSPALPLLLSTLSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTLLLALAPNVG 93 (338)
T ss_pred HHHhcchHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHhhhhhhccccccchHHHHHHHHHHHHHHHHHHhCccch
Confidence 33566666677777888877666 5889999999999999999999999999999888888876666667777776112
Q ss_pred HHHHHHHHHHHHhhcccchhhhhHHHhhhcCc-cchHHHHHHHHh-hHHHHHHhHHhHHHHHhhc--cCcchhHHHHhHH
Q 012902 136 LPFLLVVRVFMGIGEGVAMPAMNNILSKWVPV-AERSRSLALVYS-GMYLGSVTGLAFSPFLIHR--FGWPSVFYSFGSL 211 (454)
Q Consensus 136 ~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~-~~rg~~~~~~~~-~~~~g~~ig~~l~~~l~~~--~gwr~~f~~~~~~ 211 (454)
.+.+.+.|+++|++.+...+...+++.|+.|+ ++|+...+.... ...+|..+++.+++.+... .+||+.|......
T Consensus 94 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (338)
T COG0477 94 LALLLILRLLQGLGGGGLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGALLWGWRAAFLLAALL 173 (338)
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHH
Confidence 88999999999999999999999999999987 689999999888 5888999999887777654 6799977766655
Q ss_pred HHHH
Q 012902 212 GTVW 215 (454)
Q Consensus 212 ~~~~ 215 (454)
....
T Consensus 174 ~~~~ 177 (338)
T COG0477 174 GLLL 177 (338)
T ss_pred HHHH
Confidence 5443
No 226
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.03 E-value=1.1e-08 Score=86.71 Aligned_cols=355 Identities=13% Similarity=0.095 Sum_probs=184.6
Q ss_pred hhhhhcchhhhhhcCCChhhHHHHHHHHHHHHHHhhhhhhhhhccccchHHHHHHHHHHHHHHhhhhhcccccHHHHHHH
Q 012902 63 VNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVV 142 (454)
Q Consensus 63 ~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~ 142 (454)
...+|.+-.+-++++....++|.+..+..-..++...+.|.++||-|||+.-+.-.+.+.++++ .-.++ ++-.++++
T Consensus 54 WLQgPYvYyLYstYgFgkG~IgqLfiaGfgSsmLFGtivgSLaDkqGRKracvtycitYiLsCi-TKhSp--qYkVLmVG 130 (454)
T KOG4332|consen 54 WLQGPYVYYLYSTYGFGKGDIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCITYILSCI-TKHSP--QYKVLMVG 130 (454)
T ss_pred hhcCceeeeeehhcCccCCccceeeecccchHHHHHHHHHHHHhhhccccceeeehHHHHHHHH-hhcCC--ceEEEeeh
Confidence 3456666677888999999999998888888899999999999999999975554444444433 34566 88899999
Q ss_pred HHHHHhhcccchhhhhHH-HhhhcCccchHHHHHHH----H----hhHHHHHHhHHhHHHHHhhccC--cchhHHHHhHH
Q 012902 143 RVFMGIGEGVAMPAMNNI-LSKWVPVAERSRSLALV----Y----SGMYLGSVTGLAFSPFLIHRFG--WPSVFYSFGSL 211 (454)
Q Consensus 143 r~l~G~~~g~~~~~~~~~-i~~~~~~~~rg~~~~~~----~----~~~~~g~~ig~~l~~~l~~~~g--wr~~f~~~~~~ 211 (454)
|++-|+..+..+++..++ ++|.. ++|+.-.-+. . .+..+-.+++.+.+..+.+.++ --.+|-..+.+
T Consensus 131 R~LGGiaTsLLFSaFEsWliaEHn--ekr~FeqqWls~TFskA~ffgNglvAiiaGlfgn~lvd~~slGPVAPFdAAacf 208 (454)
T KOG4332|consen 131 RVLGGIATSLLFSAFESWLIAEHN--EKRGFEQQWLSVTFSKAVFFGNGLVAIIAGLFGNLLVDTFSLGPVAPFDAAACF 208 (454)
T ss_pred hhhhhHHHHHHHHHHHHHHHHHhh--hccCChHhhhhHHHHHHHHhhccHHHHHHHHHHHHHHHHhccCCCCchHHHHHH
Confidence 999999999988888776 56665 2333221111 1 2333444555555666666544 44455443333
Q ss_pred HHHHHHHHHHhcCCCCCCCCCCChhhhhhhhhccccCCCCCCcchhHhhcCcchHHHHHHHHHHHHHHHHHH-hhHHHHH
Q 012902 212 GTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILL-TWMPTYY 290 (454)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l 290 (454)
-.+...+.+.--.|.-.++.+.++-..+. +...+.+..|+++..+..+..+.-...+.+. .|-|. +
T Consensus 209 LaigmAvil~~W~ENygdps~~kdlltqf------------~gaa~aiaSD~ki~LLG~iqsLFE~smytFVFLWTPa-L 275 (454)
T KOG4332|consen 209 LAIGMAVILSSWSENYGDPSENKDLLTQF------------KGAARAIASDEKIALLGAIQSLFEGSMYTFVFLWTPA-L 275 (454)
T ss_pred HHHHHHHHHhhhhhccCChhhhHHHHHHh------------hHhHHHHhcchHHHHHHHHHHHHhhhhheeeeeeccc-C
Confidence 33322222222222111111111100000 1122334556666555444444443444333 23332 2
Q ss_pred HHHhCCcccchhhHhHHHHHHHHHHHHHHHHHhhhhhhcCccchhhHHHHHHHHHHHHHHHHHHhhc---cChhH-HHHH
Q 012902 291 NQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSH---VDSPA-MAVL 366 (454)
Q Consensus 291 ~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~-~~~~ 366 (454)
.. +-...--|.+++.+.+..++|+-+..++..|-..|--.. ..+...+......+.+..... ..++. ..+.
T Consensus 276 sp--n~e~iPhGfiFatFMlASmLGSSla~Rl~s~s~~~ve~y---mqivf~vs~a~l~Lpilt~~vsP~kes~~~s~i~ 350 (454)
T KOG4332|consen 276 SP--NDEEIPHGFIFATFMLASMLGSSLASRLLSRSSPKVESY---MQIVFLVSIAALLLPILTSSVSPSKESPSESLIG 350 (454)
T ss_pred CC--CcccCCchhHHHHHHHHHHHhhHHHHHHHhcCCcccchH---HHHHHHHHHHHHHHHHHHhccCCCcCCchHHHHH
Confidence 21 111222478888888888888877777666554442111 111111111111111111111 11122 2333
Q ss_pred HHHHHHhhhhhhcchhhhhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHhcc--CCchhHHHHHHHHHHHHHHH
Q 012902 367 CMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQH--GSWDDVFKVSVGLYLVGTAV 442 (454)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~--~g~~~~~~~~~~~~~~~~~~ 442 (454)
+..+-...+...++....-.+.+|.+.|++.+-+...--++-..++-... =.|. .+-+..|-++.+...++.+.
T Consensus 351 F~~~E~cvGlfwPSimkmRsqyIPEearstimNfFRvPLnifvClvLynl--h~~~~p~~tr~mf~icS~~~~~a~i~ 426 (454)
T KOG4332|consen 351 FCLFEACVGLFWPSIMKMRSQYIPEEARSTIMNFFRVPLNIFVCLVLYNL--HVDAFPTTTRNMFGICSAFLFVASIL 426 (454)
T ss_pred HHHHHHHHhhcchHHHHHHHhhCCHHHHhhhhhheechhhHhhhhhheec--ccccCccccchhhhhhHHHHHHHHHH
Confidence 33333344444444444444556667788766665544444333322110 0111 34556777777776666544
No 227
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.02 E-value=6.5e-09 Score=100.21 Aligned_cols=144 Identities=14% Similarity=0.111 Sum_probs=120.6
Q ss_pred Hhhhchhhhhcchhhhhh-cCCChhhHHHHHHHHHHHHHHhhhhhhhhhccccchHHHHHHHHHHHHHHhhhhhcccccH
Q 012902 58 IVFGQVNMSIAILPMSAE-FNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGL 136 (454)
Q Consensus 58 ~~~~~~~~~~~~~~i~~~-~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~l~~~~~~~~~ 136 (454)
............+.+.++ ++ ++...+.+..+..++..++.+++++++||+|+|+.+..+.++.+++.++..+.+..|.
T Consensus 237 ~~~~~~~~~~~~~y~~~~vl~-~~~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (428)
T PF13347_consen 237 QWLAFALMNTFLPYYFTYVLG-NEGLISIFMLIFFVASIVGSPLWGRLSKRFGKKKVYIIGLLLAALGFLLLFFLGPGSP 315 (428)
T ss_pred HHhhhhhhhhHHHHHHHHHhc-CchhhHHHHHHHHHHHHHHHHHHHHHHHHccceeehhhhHHHHHHHHHHHHHHHhhhH
Confidence 444445555555665555 45 4477888899999999999999999999999999999999999999998877752378
Q ss_pred HHHHHHHHHHHhhcccchhhhhHHHhhhcCc-------cchHHHHHHHHhhHHHHHHhHHhHHHHHhhccCcc
Q 012902 137 PFLLVVRVFMGIGEGVAMPAMNNILSKWVPV-------AERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWP 202 (454)
Q Consensus 137 ~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~-------~~rg~~~~~~~~~~~~g~~ig~~l~~~l~~~~gwr 202 (454)
+.+++.-++.|++.+...+...++++|..+. ++.|...|..+...-+|..+++.+.+.+.+..|+.
T Consensus 316 ~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i~g~~l~~~Gy~ 388 (428)
T PF13347_consen 316 WLVLILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGAIVGLLLALVGYD 388 (428)
T ss_pred HHHHHHHHHhHhhhcccccccccccccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHHHHHHHHHHhCcC
Confidence 9999999999999999999999999998863 44689999999999999999999999888766653
No 228
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.01 E-value=3.3e-09 Score=103.55 Aligned_cols=159 Identities=13% Similarity=0.084 Sum_probs=108.4
Q ss_pred hhchhhhhcchh-hhhhcCCChhhHHHHHHHHHHHHHHhhhhhhhhhccccchHHH--------HHHHHHH--HHHHhhh
Q 012902 60 FGQVNMSIAILP-MSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVL--------GFGVVWW--SIATALT 128 (454)
Q Consensus 60 ~~~~~~~~~~~~-i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~--------~~~~~~~--~~~~~l~ 128 (454)
.........+|. +.+++|.+..+.+++.++..++..++.++.|+++||+++|+.. ..+.... ++.....
T Consensus 275 ~~~~~~~~~lp~~l~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (465)
T TIGR00894 275 WLYTILPTYLPTFISWVLRVSGKENGLLSSLPYLFAWLCSIFAGYLADFLKSSKTLSLTAARKIFNGIGGLGPGIFAYAL 354 (465)
T ss_pred HHHHHHHHHHHHHHHHHhCcChHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333344445565 5667899999999999999999999999999999998755321 1111111 1111111
Q ss_pred hh-cccccHHHHHHHHHHHHhhcccchhhhhHHHhhhcCccchHHHHHHHHhhHHHHHHhHHhHHHHHhhcc---Ccchh
Q 012902 129 PV-AAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRF---GWPSV 204 (454)
Q Consensus 129 ~~-~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~ig~~l~~~l~~~~---gwr~~ 204 (454)
.. .. +....++.-.+.+.+.+...+.......|..| +.+|.+.++.+....+|..++|.+.+.+.+.. +|+..
T Consensus 355 ~~~~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~l~~~i~p~l~g~~~~~~~~~~~~~~ 431 (465)
T TIGR00894 355 PYLSA--AFYLTIIILTLANAVSSGPLAGVLINSLDLAP-RFLGFIKGITGLPGFIGGLIASTLAGNILSQDSKNVWLIV 431 (465)
T ss_pred HHcCC--chHHHHHHHHHHHHHhhhhhhhhhhchhhcCh-hHHHHHHHHHHHHHHHHHHHHHHhhheeeCCCCchHHHHH
Confidence 22 22 34444445555566555555555555667775 58999999999999999999999999887643 38889
Q ss_pred HHHHhHHHHHHHHHHHH
Q 012902 205 FYSFGSLGTVWFTVWLS 221 (454)
Q Consensus 205 f~~~~~~~~~~~~~~~~ 221 (454)
|.+.++..++..++...
T Consensus 432 f~~~~~~~~i~~i~~~~ 448 (465)
T TIGR00894 432 FLIMAFVNILCVIFYLI 448 (465)
T ss_pred HHHHHHHHHHHHHHeee
Confidence 99888777776555444
No 229
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.01 E-value=1.8e-08 Score=94.73 Aligned_cols=157 Identities=11% Similarity=0.013 Sum_probs=99.0
Q ss_pred HHHhhHHHHHHHHhCCcccchhhHhHHHHHHHHHHHHHHHHHhhhh-----hhcCccchhhHHHHHHHHHHHHHHH--HH
Q 012902 281 ILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTL-----VSKGLSVTTVRKIMQSIGFLGPAFF--LT 353 (454)
Q Consensus 281 ~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-----~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 353 (454)
......|.+++| .|+|.++.++.... .+...+ .++.|+++||+ ||||. ++. .+.+..+.. ..
T Consensus 6 ~~~~~~~~~~~~-~g~s~~~~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~~-------~l~-~~~~~~~~~~~~l 74 (356)
T TIGR00901 6 LVGNTLPYWLRS-KNVSLKTIGFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRRS-------WLV-LTQVLLLSLLLIL 74 (356)
T ss_pred hHHhHHHHHHHH-cCCCHHHHHHHHHH-HHHHHH-HHHHHHHHhcccCCCCCccHH-------HHH-HHHHHHHHHHHHH
Confidence 345567888887 69999999998655 444444 88999999998 66632 221 111111111 11
Q ss_pred Hhhcc-ChhHHHHHHHHHHHhhhhhhcchhhhh-hcccccccchhHHHHHHHHHHHHHHHHHHHHHHHhccCC-------
Q 012902 354 QLSHV-DSPAMAVLCMACSQGTDAFSQSGLYSN-HQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGS------- 424 (454)
Q Consensus 354 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g------- 424 (454)
..... .+.+......++.........+..... .+..++|+|+.+.|+.....++|..+++.+.+.+.+..+
T Consensus 75 ~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~~~~~ 154 (356)
T TIGR00901 75 SFLVPSTDLPLLAGLAFLIAFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLASPEFANTGLIT 154 (356)
T ss_pred HcCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccc
Confidence 11111 222222222222222333333333444 455667899999999999999999999999999988877
Q ss_pred -chhHHHHHHHHHHHHHHHHHHhcc
Q 012902 425 -WDDVFKVSVGLYLVGTAVWNLFST 448 (454)
Q Consensus 425 -~~~~~~~~~~~~~~~~~~~~~~~~ 448 (454)
|+..|++.++..+++.+...+..+
T Consensus 155 ~wr~~f~i~ai~~l~~~~~~~~~~~ 179 (356)
T TIGR00901 155 LWGYIFFWTALLILPGLLVTLFLAK 179 (356)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHhcc
Confidence 999999888877776655444433
No 230
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=98.99 E-value=6e-09 Score=89.16 Aligned_cols=146 Identities=12% Similarity=0.079 Sum_probs=109.9
Q ss_pred hhhhhcCCChhhHHHHHHHHHHHHHHhhhhhhhhhccccchHHHHHHHHHH-HHHHhhhhhcccccHHHHHHHHHHHHhh
Q 012902 71 PMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWW-SIATALTPVAAKLGLPFLLVVRVFMGIG 149 (454)
Q Consensus 71 ~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~-~~~~~l~~~~~~~~~~~l~~~r~l~G~~ 149 (454)
.++++||+|+...+.+.+....-.++.+++.|.++||+|++...+.+..+. .++-....++ ++.=+.+..+.|+.
T Consensus 290 fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~~wv~~a~~~tl~~H~~l~Ft----~lsPy~~m~~lGLs 365 (459)
T KOG4686|consen 290 FFQKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKYGFNLWWVASACILTLLGHSGLFFT----FLSPYTSMTFLGLS 365 (459)
T ss_pred HHHHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhhcceehhHHHHHHHHHHHhhhHHhh----hccHHHHHHHHhhh
Confidence 378999999999999999888889999999999999999998876655443 3333333333 23334566788888
Q ss_pred cccchhhhhHHHhhhcCccchHHHHHHHHhhHHHHHHhHHhHHHHHhhccC---cchhHHH-HhHHHHHHHHHHH
Q 012902 150 EGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFG---WPSVFYS-FGSLGTVWFTVWL 220 (454)
Q Consensus 150 ~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~ig~~l~~~l~~~~g---wr~~f~~-~~~~~~~~~~~~~ 220 (454)
...........++...|+++.|.+.|..+...++|..+-|.+++.+.++-| |--.|.+ .+.+++....+.+
T Consensus 366 ysllAcslWP~va~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~i~d~~g~y~~le~ffl~~~~~aL~svgil~ 440 (459)
T KOG4686|consen 366 YSLLACSLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGFIADGDGSYDNLEAFFLIIGLMALTSVGILF 440 (459)
T ss_pred HHHHHHHHhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhhheeecCCCchhhHHHHHHHHHHHHHHHHHHHh
Confidence 776666667788889999999999999999999999999999999998654 4334443 4444444433333
No 231
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=98.98 E-value=1.2e-08 Score=99.13 Aligned_cols=150 Identities=13% Similarity=0.123 Sum_probs=122.4
Q ss_pred hhhcCCChhhHHHHHHHHHHHHHHhhhhhhhhhccccchHHHHHHHHHHHHHHhhhhhc----------ccccHHHHHHH
Q 012902 73 SAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVA----------AKLGLPFLLVV 142 (454)
Q Consensus 73 ~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~l~~~~----------~~~~~~~l~~~ 142 (454)
.+++|.++.+.|.+.....++..++....+++.+|++.|+++.++.++.+++.+..... + +.+.....
T Consensus 280 ~~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~--~~~~~~~~ 357 (468)
T TIGR00788 280 TQCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTFPYRLLFGVTTLLYTLSSLFDLILVKRWNLAFGIS--DEVFVLGD 357 (468)
T ss_pred cccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhCceeeeeccccccCCC--Ceeeeeeh
Confidence 35789999999999999999999999999999999999999999999999888664311 3 34455666
Q ss_pred HHHHHhhcccchhhhhHHHhhhcCccchHHHHHHHHhhHHHHHHhHHhHHHHHhhccC-----cchhHHHHhH---HHHH
Q 012902 143 RVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFG-----WPSVFYSFGS---LGTV 214 (454)
Q Consensus 143 r~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~ig~~l~~~l~~~~g-----wr~~f~~~~~---~~~~ 214 (454)
-++.+++.+..+.+...++.+..|++++|...++..+..++|..+++.+++.+.++.| ++..+....+ ..++
T Consensus 358 ~~l~~~~~g~~~~~~~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~~gg~l~~~~g~~~~~~~~~~~~i~i~~~~~l~ 437 (468)
T TIGR00788 358 SIIAEVLAQLKFMPFLVLLARLCPSGCESSVFALLASILHLGSSVSGFLGVLLMETIGITCDNSNNLWLLILGHSLAPLL 437 (468)
T ss_pred hHHHHHHHHHHHccHHHHHHHhCCCCceehHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccchHHHHHHHHHHHHH
Confidence 8899999999999999999999999999999999999999999999999999998877 5554443332 2333
Q ss_pred HHHHHHHhcCC
Q 012902 215 WFTVWLSKAHS 225 (454)
Q Consensus 215 ~~~~~~~~~~~ 225 (454)
.+.+ ...+|+
T Consensus 438 ~l~~-~~llP~ 447 (468)
T TIGR00788 438 PLPL-LHLLPR 447 (468)
T ss_pred HHHH-HHhCCC
Confidence 3223 335675
No 232
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=98.98 E-value=4.8e-08 Score=95.09 Aligned_cols=176 Identities=11% Similarity=0.076 Sum_probs=108.1
Q ss_pred hhcCcchHHHHHHHHHHHHHH----HHHHhhHHHHHHHHhCCcccchhhHhHHHHHHHHHHHHHHHHHhhhhhhcCccch
Q 012902 259 ILSKPPVWALIVSHFCHNWGT----FILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVT 334 (454)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~ 334 (454)
.+++++++..+....+..... ......++...+| .|-+ ....++.....++..++.++.|+++|.+|||.
T Consensus 36 ~~~s~~~i~~~~~~~~~~~~~~~~~~~~a~~l~~I~~d-iG~~-~~~~w~~~~~~l~~av~~~~~G~LSDlfGRr~---- 109 (599)
T PF06609_consen 36 YYRSPRFIASFAAFSLAVIAAYFVLVLPASILPYINAD-IGGS-DNWSWFSTAWTLASAVSFPFVGRLSDLFGRRY---- 109 (599)
T ss_pred ceeCHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHh-cCCC-ccchHHHHHHHHHHHHHHHhhHHHHHHhcchH----
Confidence 345666665544433333322 2223445555555 5755 45667778888999999999999999999993
Q ss_pred hhHHHHHHHHHHHHHHHHHHhhccChhHH-HHHHHHHHHhhhhhhcchhhhhhcccccccchhHHHHHHHHHHHHHHHHH
Q 012902 335 TVRKIMQSIGFLGPAFFLTQLSHVDSPAM-AVLCMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGT 413 (454)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~ 413 (454)
....+.+...+........++... .....+.+.+. +..........+..|.+.|....++.....-....++|
T Consensus 110 -----~~i~g~~l~vvG~Iv~atA~~~~~~iag~~l~Gvga-G~~~~~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~ 183 (599)
T PF06609_consen 110 -----FFIIGSLLGVVGSIVCATAQNMNTFIAGMVLYGVGA-GVQELAALAISELVPNKWRGLGLAIASIPFIITTWISP 183 (599)
T ss_pred -----HHHHHHHHHHhHHHHhhcCCcHHHHHHHHHHHHHhh-HHHHHHHHHHHHhcccchhhhHhHHHHHHHHhhhcccH
Confidence 333333333333333334444333 34444444443 33333333445556667888877776665555556778
Q ss_pred HHHHHHhccCCchhHHHHHHHHHHHHHHHHHHh
Q 012902 414 AATGYILQHGSWDDVFKVSVGLYLVGTAVWNLF 446 (454)
Q Consensus 414 ~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 446 (454)
.+...+..+.+|++.|++..+...++++...++
T Consensus 184 ~ia~~~~~~~~WRw~~~~~~i~~~i~~vl~~~f 216 (599)
T PF06609_consen 184 LIAQLFAAHSGWRWIFYIFIIWSGIALVLIFFF 216 (599)
T ss_pred HHHHHhccCCCcchHHHHHHHHHHHHHHHHHHH
Confidence 888777777899999999988877776655444
No 233
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=98.98 E-value=9.4e-10 Score=100.85 Aligned_cols=175 Identities=14% Similarity=0.117 Sum_probs=122.3
Q ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHhCCcccchhhHhHHHHHHHHHHHHHHHHHhhhhhhcCccchhhHHHHHHHHHH
Q 012902 267 ALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFL 346 (454)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~ 346 (454)
.+++...+...-.+.+-..++. .++.+|.++...|++.....+...+.+++.|++.||+.|++++..+...+ ..+.+
T Consensus 37 il~~vnlmny~Dr~~iagv~~~-v~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~~v~~vG~~iW--~~Av~ 113 (493)
T KOG1330|consen 37 ILCLVNLMNYADRYTIAGVLKE-VQTYFNISDSELGLLQTVFIVVFMIASPLFGYLADRYNRKRVIAVGIFIW--TLAVF 113 (493)
T ss_pred HHHHHHHHHHhhhhhhhhhhHH-HHHhcCCCchhccchhHHHHHHHHHHHHHHHHHHhhcCcceEEeeHHHHH--HHHHH
Confidence 3444444444444444443333 34458999999999999999999999999999999999998766554222 22222
Q ss_pred HHHHHHHHhhccChhHHHHHHHHHHHhhhhhhcchhhhhhccccc-ccchhHHHHHHHHHHHHHHHHHHHHHHHhccCC-
Q 012902 347 GPAFFLTQLSHVDSPAMAVLCMACSQGTDAFSQSGLYSNHQDIAP-RYSGVLLGLSNTAGVLAGVFGTAATGYILQHGS- 424 (454)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g- 424 (454)
+.+ ..+..|.+.++=.+.+.+.....+.......|..| ++|++++++.+....+|..+|-..++.+.+..+
T Consensus 114 ~~~-------fs~~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~~~ 186 (493)
T KOG1330|consen 114 ASG-------FSNHFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASLTFW 186 (493)
T ss_pred HHH-------HHHHHHHHHHHHHHhccchhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeeccCccc
Confidence 211 12444444444444444444455555555555555 689999999999999999999999988888855
Q ss_pred chhHHHHHHHHHHHHHHHHHHhccCCc
Q 012902 425 WDDVFKVSVGLYLVGTAVWNLFSTGEK 451 (454)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 451 (454)
|+++|...+++.++..++..++.++++
T Consensus 187 Wr~af~~~avl~vi~~~L~~~f~~eP~ 213 (493)
T KOG1330|consen 187 WRWAFRGSAVLGVIVGLLVFLFVREPE 213 (493)
T ss_pred eEEEEEeehHHHHHHHHHHHhhccCcc
Confidence 999999999999988888777765544
No 234
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.97 E-value=3.9e-09 Score=94.81 Aligned_cols=146 Identities=18% Similarity=0.087 Sum_probs=109.2
Q ss_pred hCCcccchhhHhHHHHHHHHHHHHHHHHHhhhhhhcCccchhhHHHHHHHHHHHHHHHHHHhhccChhHH-HHHHHHHHH
Q 012902 294 LHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAM-AVLCMACSQ 372 (454)
Q Consensus 294 ~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 372 (454)
.+-+..+.|+++....+.+++.+++.|.+.||+|+|-. +.+++......-..+...+.... +++=.+-+.
T Consensus 101 ~~~e~~~iG~LFaskA~~qllvnp~~G~l~~~iGy~ip---------m~~Gl~vmf~sTilFafg~sy~~l~vAR~LQgv 171 (464)
T KOG3764|consen 101 LDRENTQIGLLFASKALVQLLVNPFFGNLIDRIGYKIP---------MVAGLFVMFLSTILFAFGNSYPMLFVARSLQGV 171 (464)
T ss_pred ccccccchhHHHHHHHHHHHHhcccchhhHHHhccccH---------HHHHHHHHHHHHHHHHHcchhHHHHHHHHHhhh
Confidence 45677889999999999999999999999999999943 33333333333333344444443 333344455
Q ss_pred hhhhhhcchhhhhhcccccc-cchhHHHHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHHHHhcc
Q 012902 373 GTDAFSQSGLYSNHQDIAPR-YSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWNLFST 448 (454)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 448 (454)
+.............+..+.| +|++++|+.-.+..+|-.+||+++|.++|..|++.+|.+.++++++-..+-++..+
T Consensus 172 gsA~~~tsglamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~Gk~aPFlVL~~v~Lld~~L~l~vi~ 248 (464)
T KOG3764|consen 172 GSAFADTSGLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFAGKSAPFLVLAIVLLLDGALQLLVIE 248 (464)
T ss_pred hHHHHHhhhHHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhcCCcCcHHHHHHHHHHHHHHHHheeC
Confidence 55555555555555666654 58999999999999999999999999999999999999999999988877666543
No 235
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=98.97 E-value=2.6e-08 Score=95.35 Aligned_cols=177 Identities=12% Similarity=0.077 Sum_probs=116.0
Q ss_pred hHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCcccchhhHhHHHHHHHHHHHHHHHHHhh----hhhhcCccchhhHHHH
Q 012902 265 VWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIAD----TLVSKGLSVTTVRKIM 340 (454)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d----r~~~~~~~~~~~~~~~ 340 (454)
+..+....+...+++.....+++.|+++ +|.++...+.+.....+...+.+++.|+++| |+||||....
T Consensus 6 li~~~~~~~Giq~~~~l~~~~l~~yl~~-lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il------ 78 (477)
T TIGR01301 6 LLRVASVAAGVQFGWALQLSLLTPYVQE-LGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIA------ 78 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHH------
Confidence 4445555566677777788888888876 7999999999999999999999999999999 5999964332
Q ss_pred HHHHHHHHHHHHHHhhccCh--------------h---HHHHH-HHHHHHhhhhhhcchhhhhhcccccccc--hhHHHH
Q 012902 341 QSIGFLGPAFFLTQLSHVDS--------------P---AMAVL-CMACSQGTDAFSQSGLYSNHQDIAPRYS--GVLLGL 400 (454)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~--------------~---~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~g~ 400 (454)
.+.......+.......+ . +..+. ..+...+......+......+..++++| +.+.++
T Consensus 79 --~g~~~~~~~l~ll~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~ 156 (477)
T TIGR01301 79 --AGAALVAFAVILIGFAADIGHLFGDNLDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAY 156 (477)
T ss_pred --HHHHHHHHHHHHHHhCchhhhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHH
Confidence 111111111111111111 1 11111 2222233333444444444455665543 689999
Q ss_pred HHHHHHHHHHHHHHHHHHH--hcc-------------CCchhHHHHHHHHHHHHHHHHHHhccCC
Q 012902 401 SNTAGVLAGVFGTAATGYI--LQH-------------GSWDDVFKVSVGLYLVGTAVWNLFSTGE 450 (454)
Q Consensus 401 ~~~~~~~g~~~~~~~~g~l--~~~-------------~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 450 (454)
.+...++|+.+|+.+.+.. .+. .+++..|++.+++.+++..+..+..+|+
T Consensus 157 ~~~~~~lG~ilg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~ 221 (477)
T TIGR01301 157 FSFFMAIGNVLGYAAGAYSGLYKIFPFTKTEACGVSCANLKSCFLIDIILLAILTYIALSAVKEN 221 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHhHHHhcccccccccccccchHHHHHHHHHHHHHHHHHHHeeeeecc
Confidence 9999999999999998865 221 1677889998888888887777765543
No 236
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=98.95 E-value=2e-08 Score=93.59 Aligned_cols=181 Identities=13% Similarity=0.141 Sum_probs=131.1
Q ss_pred hhcC-cchHHHHHHHHHHHHHHHHHHhhHHHHHHHHhC----CcccchhhHhHHHHHHHHHHHHHHHHHhhhh-hhcCcc
Q 012902 259 ILSK-PPVWALIVSHFCHNWGTFILLTWMPTYYNQVLH----FNLTESGLFCVLPWLTMAFSANLGGWIADTL-VSKGLS 332 (454)
Q Consensus 259 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g----~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-~~~~~~ 332 (454)
.++. |.++.+...-+.--+++|+....+..|+....+ +|.+++.-++..+..-.-+..+++||++||+ |+|+.
T Consensus 16 ~f~~Pr~l~~if~vE~WERFsyYGmraiL~~Yl~~~~~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~t- 94 (498)
T COG3104 16 FFGQPRGLYLIFFVELWERFSYYGMRAILILYLYYQLGDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRT- 94 (498)
T ss_pred cCCCCchHHHHHHHHHHHHHhhhhhHHHHHHHHHHhccccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHH-
Confidence 3443 467778888888999999999999999988888 9999998888888887888889999999995 66632
Q ss_pred chhhHHHHHHHHHHHHHHHHHHhhcc---ChhHHHHHHHHHHHhhhhhhcchhhhhhcc-cccc--cchhHHHHHHHHHH
Q 012902 333 VTTVRKIMQSIGFLGPAFFLTQLSHV---DSPAMAVLCMACSQGTDAFSQSGLYSNHQD-IAPR--YSGVLLGLSNTAGV 406 (454)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~g~~~~~~~ 406 (454)
.+ .+.+...+........ ......+...++..+. +..-+.......+ .+|+ +|-...++.....+
T Consensus 95 ------I~--lGail~~iGh~~L~~~~~~~~~gl~i~L~~I~iG~-Gl~K~NiS~llg~ly~~~DprrD~gFt~fY~~iN 165 (498)
T COG3104 95 ------IV--LGAILMAIGHLVLAISSVSGPGGLYIGLALIIVGT-GLFKPNISSLLGELYPKDDPRRDGGFTLFYMGIN 165 (498)
T ss_pred ------HH--HHHHHHHHHHHHHhccccccccHHHHHHHHHHhcc-ccccccHHHHHHHhcCCCCcccCCCccEEEEEee
Confidence 22 2222222222222222 2334444444444443 4444455544433 3332 47788899999999
Q ss_pred HHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHHHHhccC
Q 012902 407 LAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWNLFSTG 449 (454)
Q Consensus 407 ~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 449 (454)
+|+.++|.+.+++.++.||...|...++-+..+.+.+++.++.
T Consensus 166 iGsl~~p~i~~~~~~~~g~~~gF~~aavGm~~gl~~f~~~~r~ 208 (498)
T COG3104 166 IGSLIAPIITGLLAINYGWHVGFGLAAVGMIIGLVIFLLGRRH 208 (498)
T ss_pred hHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHccch
Confidence 9999999999999999999999999999999999888777643
No 237
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=98.93 E-value=3.1e-09 Score=99.01 Aligned_cols=148 Identities=17% Similarity=0.167 Sum_probs=134.2
Q ss_pred hhhhhcCCChhhHHHHHHHHHHHHHHhhhhhhhhhccccchHHHHHHHHHHHHHHhhhhhcccccHHHHHHHHHHHHhhc
Q 012902 71 PMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMGIGE 150 (454)
Q Consensus 71 ~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~r~l~G~~~ 150 (454)
.-.||.+..+...|........+-.+.-++.+++.+|+|+-+++..++.+.++=.+..+..+ |.|+.+-..+++|+..
T Consensus 396 WHled~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv~v~~lgLa~~~~Rf~~~S~L~--n~W~vLPieilqgit~ 473 (618)
T KOG3762|consen 396 WHLEDLGGIKTLFGVVSALCHAGEILFYFFSFKLIEKIGHVNVMYLGLACNVGRFLYYSYLQ--NPWMVLPIEILQGITH 473 (618)
T ss_pred HHHhhcCCcceeeeehhhhhccchHHHHHHHHHHHHHhcccceeeehhhHHHHHHHHHHHhc--CchheeeHHHHHHHHH
Confidence 34567777788889888888999999999999999999999999999999999999999999 9999999999999999
Q ss_pred ccchhhhhHHHhhhcCccchHHHHHHHH-hhHHHHHHhHHhHHHHHhhccCcchhHHHHhHHHHHHHHHHH
Q 012902 151 GVAMPAMNNILSKWVPVAERSRSLALVY-SGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWL 220 (454)
Q Consensus 151 g~~~~~~~~~i~~~~~~~~rg~~~~~~~-~~~~~g~~ig~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~ 220 (454)
+..+....+|+++..||+-|..+.++.+ ...++|--+|.++||.+.+.+|=|..|.+.++.+++.+++..
T Consensus 474 aliWaa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~~fg~~ttf~~~giAcl~~l~~~~ 544 (618)
T KOG3762|consen 474 ALIWAAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVVERFGARTTFRIFGIACLVTLALFI 544 (618)
T ss_pred HHHHHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhhheeehhHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999875 456789999999999999999999999999988887765443
No 238
>PTZ00207 hypothetical protein; Provisional
Probab=98.90 E-value=1.3e-07 Score=92.67 Aligned_cols=156 Identities=12% Similarity=0.069 Sum_probs=91.9
Q ss_pred HHHHhhHHHHHHHHhCCcccchhhHhHHHHHHHHHHHHHHHHHhhhhhhcCccchhhHHHHHHHHHHHHHHHHHHhhc--
Q 012902 280 FILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSH-- 357 (454)
Q Consensus 280 ~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 357 (454)
+.+..+.|. +++.+|+|..+.+.+..... ......+..|++.||+|+|+....+ ..+...+........
T Consensus 44 y~fsv~s~~-L~~~lgls~~~l~~i~svg~-~~g~~~lp~G~L~Dr~G~R~vllig-------~ll~~iG~ll~ala~~~ 114 (591)
T PTZ00207 44 YAFNLISGA-MQARYNLTQRDLSTITTVGI-AVGYFLLPYSFIYDYLGPRPIFVLS-------MTVFCLGTLLFALTFQE 114 (591)
T ss_pred HHHHHHHHH-HHHHhCcCHHHHHHHHHHHH-HHHHHHHHHHHHHHHhCcHHHHHHH-------HHHHHHHHHHHHHHhcc
Confidence 445555554 56668999999988876633 3334666789999999999543322 111111111111111
Q ss_pred --cChhHHH-HHHHHHHHhhhhhhcchhhhhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHH
Q 012902 358 --VDSPAMA-VLCMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVG 434 (454)
Q Consensus 358 --~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~ 434 (454)
..+.+.. +...+.+.+.+... +.......+..|++||.+.|+......+|+++.+.+...+.+ .+++..|++.++
T Consensus 115 ~i~~s~~~l~l~r~l~G~G~~~~~-~~~~~~i~~~Fp~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~-~~~~~~fl~l~v 192 (591)
T PTZ00207 115 VIEGSVVRLSVYNGLMTLGCMLFD-LGAVVTVLSVFPSNRGAVVAIMKTFTGLGSAILGSIQLAFFS-DNTSAYFFFLMS 192 (591)
T ss_pred cccCcHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhHHHHHHHHHH
Confidence 1233332 33333333333233 333333444567899999999999999999865555554544 357777877777
Q ss_pred HHHHHHHHHHHh
Q 012902 435 LYLVGTAVWNLF 446 (454)
Q Consensus 435 ~~~~~~~~~~~~ 446 (454)
..++..++...+
T Consensus 193 l~~vv~ll~~~~ 204 (591)
T PTZ00207 193 FALVVGILAIVF 204 (591)
T ss_pred HHHHHHHHHHhh
Confidence 777666555554
No 239
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=98.90 E-value=5.8e-08 Score=86.61 Aligned_cols=162 Identities=14% Similarity=0.093 Sum_probs=129.6
Q ss_pred hhchhhhhcchhhhhhcCCChhhHHHHHHHHHHHHHHhhhhhhhhhccc-cchHHHHHHHHHHHHHHhhhhhcccccHHH
Q 012902 60 FGQVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTV-GGKAVLGFGVVWWSIATALTPVAAKLGLPF 138 (454)
Q Consensus 60 ~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-Grr~~~~~~~~~~~~~~~l~~~~~~~~~~~ 138 (454)
+..+..-.=+|.+..|-|+|..+.|++.+...+.....++....+.+|. .+|+..+....++.++...+.+.| ....
T Consensus 222 ~~~Y~~~~WLP~ili~~G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~~l~G~~G~~~~P--~~~~ 299 (395)
T COG2807 222 LLYYIVIGWLPAILIDRGLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALLLMLVGLVGLLLAP--GQLP 299 (395)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHhh--hhHH
Confidence 3334444457899999999999999999999999999999999999964 477778888888888888888887 3222
Q ss_pred HHHHHHHHHhhcccchhhhhHHHhhhcCc-cchHHHHHHHHhhHHHHHHhHHhHHHHHhhcc-CcchhHHHHhHHHHHHH
Q 012902 139 LLVVRVFMGIGEGVAMPAMNNILSKWVPV-AERSRSLALVYSGMYLGSVTGLAFSPFLIHRF-GWPSVFYSFGSLGTVWF 216 (454)
Q Consensus 139 l~~~r~l~G~~~g~~~~~~~~~i~~~~~~-~~rg~~~~~~~~~~~~g~~ig~~l~~~l~~~~-gwr~~f~~~~~~~~~~~ 216 (454)
++ .-++.|+|.|..++.+...+.+..++ ++-++..+..+....+=...||.+.|++.|.. +|+..+.......++..
T Consensus 300 ~l-w~~llG~G~G~~F~laL~li~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~l~G~lhDa~gsw~~~~~~l~~~~i~m~ 378 (395)
T COG2807 300 IL-WALLLGLGQGGAFPLALTLILLRSSDAAIAAALSGMAQGVGYLLAAFGPWLFGFLHDATGSWSAPLVLLALATLLML 378 (395)
T ss_pred HH-HHHHHhCccchHHHHHHHHHHhhcCChHHHHHHHHHhhhhhHHHHhhhhhhHhHHHHhcCChHHHHHHHHHHHHHHH
Confidence 22 25999999999999999999998854 44566777777777777889999999999865 59999988887777776
Q ss_pred HHHHHhcC
Q 012902 217 TVWLSKAH 224 (454)
Q Consensus 217 ~~~~~~~~ 224 (454)
+..+..-|
T Consensus 379 i~Gl~a~r 386 (395)
T COG2807 379 IFGLRAGR 386 (395)
T ss_pred HHHhhcch
Confidence 66665443
No 240
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=98.87 E-value=5.8e-08 Score=97.47 Aligned_cols=158 Identities=13% Similarity=0.095 Sum_probs=103.1
Q ss_pred HHHHHHhCCcccchhhHhHHHHHHHHHHHHHHHHHhhhhhhcCccchhhHHHHHHHHHHHHHHHHHHhh-----------
Q 012902 288 TYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLS----------- 356 (454)
Q Consensus 288 ~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------- 356 (454)
..++++++++..+.|++.+.+.++..++.++.+++.||.+||+.+..+. .+..++.+..++.-....
T Consensus 57 ~~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~--ll~~lg~ll~alphf~~~~y~~~~~~~~~ 134 (633)
T TIGR00805 57 TTIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGC--AIMGLGSFLLSLPHFLSGRYSYSTTVSST 134 (633)
T ss_pred hhhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcceEEEecH--HHHHHHHHHHhChHHhcCCcccccccccc
Confidence 3455669999999999999999999999999999999999998776553 333333333222111000
Q ss_pred -------------c-----------------c--C-hhHHH-HHHHHHHHhhhhhhcchhhhhhcccccccchhHHHHHH
Q 012902 357 -------------H-----------------V--D-SPAMA-VLCMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSN 402 (454)
Q Consensus 357 -------------~-----------------~--~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 402 (454)
. . + ....+ +.-++.+.+...........+.+..++++|+.+.|+.+
T Consensus 135 ~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~~~~~~~~~i~~ 214 (633)
T TIGR00805 135 GNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDDFAKSKNSPLYIGILE 214 (633)
T ss_pred ccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhccCCccccHHHHHHHH
Confidence 0 0 0 11122 23333444444444333434444556689999999999
Q ss_pred HHHHHHHHHHHHHHHHHhccC----------------------CchhHHHHHHHHHHHHHHHHHHhc
Q 012902 403 TAGVLAGVFGTAATGYILQHG----------------------SWDDVFKVSVGLYLVGTAVWNLFS 447 (454)
Q Consensus 403 ~~~~~g~~~~~~~~g~l~~~~----------------------g~~~~~~~~~~~~~~~~~~~~~~~ 447 (454)
....+|..+|+.+++.+.+.. +|+..|++.+++.++..+.++++.
T Consensus 215 ~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l~~l~~v~l~~~p 281 (633)
T TIGR00805 215 SIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLICGGVALLTSIPFFFFP 281 (633)
T ss_pred HHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHhCc
Confidence 999999999999999988642 255567777776666555444443
No 241
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=98.87 E-value=1.3e-08 Score=90.46 Aligned_cols=131 Identities=12% Similarity=0.129 Sum_probs=101.1
Q ss_pred HHHHHHHhhhhhhhhhccccchHHHHHHHHHHHHHHhhhhhcccccH--HHHHHHHHHHHhhcccchhhhhHHHhhhcCc
Q 012902 90 FFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGL--PFLLVVRVFMGIGEGVAMPAMNNILSKWVPV 167 (454)
Q Consensus 90 ~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~l~~~~~~~~~--~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~ 167 (454)
..+.-..|.++.+++.||+|||+.+....+++++..++.-.+...|. .++..+|++. .+.+...+.|..|.+|.
T Consensus 390 tslaefPGlLIt~~iverlGRKkTMal~l~~f~iflfll~~c~~rn~~tvllf~arafi----sg~fqvaYvYtPEVyPT 465 (528)
T KOG0253|consen 390 TSLAEFPGLLITGVIVERLGRKKTMALSLILFGIFLFLLTTCKTRNAYTVLLFTARAFI----SGAFQVAYVYTPEVYPT 465 (528)
T ss_pred HHHhhCCchhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHH----hchheEEEEecCcccch
Confidence 34566778899999999999999999999999999998877763232 2334456544 44566678899999999
Q ss_pred cchHHHHHHHHhhHHHHHHhHHhHHHHHhhccCcchhHHHHhHHHHHHHHHHHHhcCCC
Q 012902 168 AERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHSS 226 (454)
Q Consensus 168 ~~rg~~~~~~~~~~~~g~~ig~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~ 226 (454)
+-|+...|..+...-+|.++.|.++ +....+-..+..+.+..+++..+...++.-|+
T Consensus 466 avRatgvGtcSsmaRIggI~~p~iA--~~~e~s~sl~i~vy~~~~ilagIavcffPiEt 522 (528)
T KOG0253|consen 466 AVRATGVGTCSSMARIGGIFSPVIA--MRAELSTSLPIFVYGALFILAGIAVCFFPIET 522 (528)
T ss_pred hhhhcchhhhhhHHhhhhhhhhHHH--HHhccceeehHHHHHHHHHHHHHHheeeeecc
Confidence 9999999999999999999999998 33334455667777777777766666654443
No 242
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=98.84 E-value=2e-08 Score=89.81 Aligned_cols=117 Identities=17% Similarity=0.057 Sum_probs=86.3
Q ss_pred CcccchhhHhHHHHHHHHHHHHHHHHHhhhhhhcCccchhhHHHHHHHHHHHHHHHHHHhhccChhHHHHHHHHHHHhhh
Q 012902 296 FNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLCMACSQGTD 375 (454)
Q Consensus 296 ~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (454)
.+...+|.+-+.+.+...+.++..|.++||+||| ..+.++.++.++....+....+...++..=++++..-
T Consensus 65 ~~~~yaGflGSsF~ilQ~~sS~~~G~~SD~yGRk---------pvll~c~~~va~s~ll~~~S~~F~afv~aR~l~Gi~k 135 (451)
T KOG2615|consen 65 ASVFYAGFLGSSFSILQFISSPLWGCLSDRYGRK---------PVLLACLIGVALSYLLWALSRNFAAFVLARFLGGIFK 135 (451)
T ss_pred ccchhhhhHhhHHHHHHHHhhhhhhhhhhhhCch---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcc
Confidence 4556789999999999999999999999999999 4445555555666655555555533333233444444
Q ss_pred hhhcchhhhhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHhc
Q 012902 376 AFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQ 421 (454)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~ 421 (454)
+..........+..++++|+.+++..++..++|..+||.++|++.+
T Consensus 136 gnl~v~rAiisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~ 181 (451)
T KOG2615|consen 136 GNLSVIRAIISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQ 181 (451)
T ss_pred CchHHHHHHHHhhcChhhccceeeeeehhhhcchhhcchhhhHHHh
Confidence 4444444445555666899999999999999999999999999988
No 243
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.83 E-value=1.2e-07 Score=89.13 Aligned_cols=139 Identities=14% Similarity=0.100 Sum_probs=113.4
Q ss_pred hhhhhcchh-hhhhcCCChhhHHHHHHHHHHHHHHhhhhhhhhhccccchHHHHHHHHHHHHHHhhhhhcccccHHHHHH
Q 012902 63 VNMSIAILP-MSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLV 141 (454)
Q Consensus 63 ~~~~~~~~~-i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~ 141 (454)
...+....+ .+--+|.++.+..+.......+..++.+++.++.+|+|+|+++..+.++..++.++.-+.+..+.+..++
T Consensus 253 ~i~~s~~~yy~~y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~~~~~~~~~i~~~~~~f~~~~~~~l~~~ 332 (467)
T COG2211 253 NIRGSIMVYYVTYVLGDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKKKLFLIGLLLLAVGYLLLYFTPAGSVVLIVV 332 (467)
T ss_pred HHHhhhhheeEEEEcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHHhhcCcchHHHHH
Confidence 334444444 3334566777777888888888888899999999999999999999999999999988877557888999
Q ss_pred HHHHHHhhcccchhhhhHHHhhhcC-------ccchHHHHHHHHhhHHHHHHhHHhHHHHHhhccCc
Q 012902 142 VRVFMGIGEGVAMPAMNNILSKWVP-------VAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGW 201 (454)
Q Consensus 142 ~r~l~G~~~g~~~~~~~~~i~~~~~-------~~~rg~~~~~~~~~~~~g~~ig~~l~~~l~~~~gw 201 (454)
..++.++|.+...+...++++|..+ .++-|...|......=+|.+++..+.++..+..|+
T Consensus 333 ~~~i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~ala~~~~g~~L~~~Gy 399 (467)
T COG2211 333 ALIIAGVGTGIANPLPWAMVADTVDYGEWKTGVRREGIVYSGMTFFRKLGLALAGFIPGWILGAIGY 399 (467)
T ss_pred HHHHHHHHhhccccccHHHhcchhhHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 9999999999999999999988763 23457788888888888999999888888876654
No 244
>PRK11462 putative transporter; Provisional
Probab=98.83 E-value=1e-07 Score=92.48 Aligned_cols=132 Identities=12% Similarity=0.053 Sum_probs=91.8
Q ss_pred hhhhhhcCCChhhHHHHHHHHHHHHHHhhhhhhhhhccccchHHHHHHHHHHHHHHhhhhhcccccHHHHHHHHHHHHhh
Q 012902 70 LPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMGIG 149 (454)
Q Consensus 70 ~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~r~l~G~~ 149 (454)
..+.++..-++...+.+.+.+.++..++.+++++++||+|+|+++..+..+.++..++..+.+..+...+++.-++.|++
T Consensus 252 ~y~~~y~~g~~~~~~~~l~~~~i~~iig~~l~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~ 331 (460)
T PRK11462 252 MYYVTWILGTPEVFVAFLTTYCVGNLIGSALAKPLTDWKCKVTIFWWTNALLAVISLAMFFVPMQASITMFVFIFVIGVL 331 (460)
T ss_pred hhhhhhhcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHH
Confidence 33333333244556677888889999999999999999999999776555444434443333311233445556777888
Q ss_pred cccchhhhhHHHhhhcC-------ccchHHHHHHHHhhHHHHHHhHHhHHHHHhhccCc
Q 012902 150 EGVAMPAMNNILSKWVP-------VAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGW 201 (454)
Q Consensus 150 ~g~~~~~~~~~i~~~~~-------~~~rg~~~~~~~~~~~~g~~ig~~l~~~l~~~~gw 201 (454)
.+...+...++++|..+ +++.|..++......-+|..+|+.+++.+.+..|+
T Consensus 332 ~~~~~~l~~~m~ad~~d~~e~~tG~r~~g~~~a~~~f~~Klg~alg~~i~g~iL~~~Gy 390 (460)
T PRK11462 332 HQLVTPIQWVMMSDTVDYGEWCNGKRLTGISFAGTLFVLKLGLAFGGALIGWMLAYGGY 390 (460)
T ss_pred HHHHHHHHHHHHHHhHhhhHHhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 77777776777877765 33346667888888999999999999998876666
No 245
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=98.82 E-value=1.6e-05 Score=76.43 Aligned_cols=247 Identities=11% Similarity=0.064 Sum_probs=149.9
Q ss_pred ChhhHHHHHHHHHH-HHHHhhhhhhhhhccccchHHHHHHHHHHHHHHhhhhhc---------cc---------------
Q 012902 79 NPATVGLIQSSFFW-GYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVA---------AK--------------- 133 (454)
Q Consensus 79 s~~~~g~~~s~~~~-~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~l~~~~---------~~--------------- 133 (454)
+++.+.++=....+ ...+...+..+++||++|.+++-.....+.....++++. ++
T Consensus 56 gae~I~flK~~~vlP~a~~f~~~y~kl~n~~s~~~lFy~~~~~F~~fF~~f~~vlyP~~~~lhp~~~~~~~~~~~~~~~~ 135 (491)
T PF03219_consen 56 GAEVIPFLKVWGVLPVAILFTILYSKLSNRLSREKLFYIIIIPFLGFFALFAFVLYPNRDILHPDAFADKLLAILPPGFK 135 (491)
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhhchhhcCCCHHHHHhhhhccchHH
Confidence 56667777664444 455668889999999999999776666666555555542 10
Q ss_pred -----ccHHHHHHHHHHHHhhcccchh-hhhHHHhhhcCccchHHHHHHHHhhHHHHHHhHHhHHHHHhh---------c
Q 012902 134 -----LGLPFLLVVRVFMGIGEGVAMP-AMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIH---------R 198 (454)
Q Consensus 134 -----~~~~~l~~~r~l~G~~~g~~~~-~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~ig~~l~~~l~~---------~ 198 (454)
.+.|.+.+.-++.-+-.....+ .-..+..|.++.+|-.|..++++.+.++|.+++..+...+.+ .
T Consensus 136 ~~i~~~~~Wt~slfYv~aElwgsvvlSlLFW~fAN~itt~~eAKRfYpl~g~ganigli~sG~~~~~~~~~~~~~~~~~~ 215 (491)
T PF03219_consen 136 GFIAMFRNWTFSLFYVMAELWGSVVLSLLFWGFANEITTVEEAKRFYPLFGLGANIGLIFSGQLTSYFSSFLRKSLPAGV 215 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccc
Confidence 0123343444444444333333 457889999999999999999999999999999998888877 1
Q ss_pred cCcchhHHHHh----HHHHHHHHHHHHhcCCCCCCCCCCChhhhhhhhhccccCCCCCCcchhHhhcCcchHHHHHHHHH
Q 012902 199 FGWPSVFYSFG----SLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFC 274 (454)
Q Consensus 199 ~gwr~~f~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (454)
..|...+.... ..+++...+.. ...+...++++.. ++...+++++++.....+++.++|+|.+..+++...+
T Consensus 216 ~~~~~~l~~l~~~v~~~g~~i~~~~~-~~~~~vl~~~~~~---~~~~~~kk~k~k~s~~es~k~l~kS~yL~~Ia~lvi~ 291 (491)
T PF03219_consen 216 DAWELSLNSLMGIVLILGIVIILLYR-YMNKNVLTDPRFY---PSAKKKKKKKPKMSLKESFKLLLKSKYLLCIALLVIA 291 (491)
T ss_pred ccHhHHHHHHHHHHHHHHHHHHHHHH-HHHHHccCccccc---hhhhcccccCCCccHHHHHHHHHhCHHHHHHHHHHHH
Confidence 23554432222 12222222222 2222111111110 0000011111222224567778899999999998888
Q ss_pred HHHHHHHHHhhHHHHHHHHhCCcccc-h---hhHhHHHHHHHHHHHHHHHHHhhhhhhcC
Q 012902 275 HNWGTFILLTWMPTYYNQVLHFNLTE-S---GLFCVLPWLTMAFSANLGGWIADTLVSKG 330 (454)
Q Consensus 275 ~~~~~~~~~~~~~~~l~~~~g~s~~~-~---~~~~~~~~~~~~~~~~~~g~l~dr~~~~~ 330 (454)
.+...+.+....-..+++.+. ++.+ . |......++..++..++++.+.+|+|-+.
T Consensus 292 Ygi~inLvE~~wK~~lk~~~~-~~~~ysafmG~~~~~tGivtii~~~l~~~iir~~GW~~ 350 (491)
T PF03219_consen 292 YGISINLVEVVWKSQLKQLYP-DPNDYSAFMGKFSSWTGIVTIIMMFLSSNIIRRFGWRT 350 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHCC-CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHH
Confidence 888888887777777776543 3322 2 44445556666666677888888888773
No 246
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=98.77 E-value=8.9e-07 Score=80.42 Aligned_cols=169 Identities=12% Similarity=0.034 Sum_probs=110.4
Q ss_pred HHHHHHHHHHHHhhHHHHHHHHhCCcccchhhHhHHHHHHHHHHHHHHHHHhhhhhhcCccchhhHHHHHHHHHHHHHHH
Q 012902 272 HFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFF 351 (454)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (454)
.|+.+......+--+-+.+++.++.+..+++++...+..+..++++..+++.+|+|.|+ .++........+..
T Consensus 21 lFfl~G~~~~l~diLip~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~-------gi~lgL~l~avg~~ 93 (422)
T COG0738 21 LFFLWGFITCLNDILIPHLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYKA-------GIVLGLLLYAVGAA 93 (422)
T ss_pred HHHHHHHHhhcchhhHHHHHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhHH-------HHHHHHHHHHHHHH
Confidence 33333344445555666788889999999999999999999999999999999999993 33333333333333
Q ss_pred HHHhh-ccChhHHHHH-HHHHHHhhhhhhcchhhhhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHhcc-------
Q 012902 352 LTQLS-HVDSPAMAVL-CMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQH------- 422 (454)
Q Consensus 352 ~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~------- 422 (454)
+.... ....+..+.. .+.++.+.+..-......+...-+|+..+.-+.+.+.+..+|+.++|.+++.+..+
T Consensus 94 lF~pAa~~~~y~~FL~~lFila~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lils~~~~~~~ 173 (422)
T COG0738 94 LFWPAASSKSYGFFLVALFILASGIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLILSGVALTMS 173 (422)
T ss_pred HHhhhhhhhhHHHHHHHHHHHHhhhHHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhhccC
Confidence 33222 2222333333 33344444433333333333444556778888999999999999999999998872
Q ss_pred ------------CCchhHHHHHHHHHHHHHHHHHHhc
Q 012902 423 ------------GSWDDVFKVSVGLYLVGTAVWNLFS 447 (454)
Q Consensus 423 ------------~g~~~~~~~~~~~~~~~~~~~~~~~ 447 (454)
..++.++...+...++..+.....+
T Consensus 174 ~~~~~~~~~~~~~~v~~pYl~~~~~lvll~v~~~~~k 210 (422)
T COG0738 174 AAQILAIKGADASSVQFPYLILAGLLVLLAVLILLSK 210 (422)
T ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhcc
Confidence 3466677777776666665555444
No 247
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=98.73 E-value=4.3e-08 Score=68.65 Aligned_cols=80 Identities=15% Similarity=0.220 Sum_probs=74.7
Q ss_pred HhhhchhhhhcchhhhhhcCCChhhHHHHHHHHHHHHHHhhhhhhhhhccccchHHHHHHHHHHHHHHhhhhhcccccHH
Q 012902 58 IVFGQVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLP 137 (454)
Q Consensus 58 ~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~l~~~~~~~~~~ 137 (454)
.+..+..+.+.+|.+++|.++|.++.|++.+.+.+||.+|++...++.++..+++.+..+.+...+..+.+++.+ +.+
T Consensus 4 mGigRFayTplLP~M~~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~ma~~~--~~~ 81 (85)
T PF06779_consen 4 MGIGRFAYTPLLPLMQADGGLSLSQAGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAAMALTH--SFW 81 (85)
T ss_pred hhhHHHHHHhHhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHh--chH
Confidence 467888999999999999999999999999999999999999999999998899999999999999999999998 766
Q ss_pred HH
Q 012902 138 FL 139 (454)
Q Consensus 138 ~l 139 (454)
.+
T Consensus 82 ~w 83 (85)
T PF06779_consen 82 LW 83 (85)
T ss_pred HH
Confidence 54
No 248
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=98.72 E-value=2.6e-06 Score=78.14 Aligned_cols=150 Identities=13% Similarity=0.069 Sum_probs=124.6
Q ss_pred hhhhhhcCCChhhHHHHHHHHHHHHHHhhhhhhhhhc-cccchHHHHHHHHHHHHHHhhhh---hcccccHHHHHHHHHH
Q 012902 70 LPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWAD-TVGGKAVLGFGVVWWSIATALTP---VAAKLGLPFLLVVRVF 145 (454)
Q Consensus 70 ~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~d-r~Grr~~~~~~~~~~~~~~~l~~---~~~~~~~~~l~~~r~l 145 (454)
|+=.+-||+|..|...+......|..++-...|++.. |.++|+.-.+|+....++..+.. ... +.+.+...-++
T Consensus 233 Pygg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~lii~a~~~~--~~~~~~~~~~l 310 (403)
T PF03209_consen 233 PYGGEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFALIILAGPLG--SPWLFRPGVFL 310 (403)
T ss_pred CchhHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHhcc--cchHHHHHHHH
Confidence 3345668999999999999999999999999999887 68888888888887777766644 344 67899999999
Q ss_pred HHhhcccchhhhhHHHhhhcCccchHHHHHHHHhhHHHHHHhHHhHHHHHhhc----------cCcchhHHHHhHHHHHH
Q 012902 146 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHR----------FGWPSVFYSFGSLGTVW 215 (454)
Q Consensus 146 ~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~ig~~l~~~l~~~----------~gwr~~f~~~~~~~~~~ 215 (454)
.|++.|.......+..-|..++++.|..+|.++..+.++..+|..+++.+.|. .+|-.+|.+.++..++.
T Consensus 311 ~G~g~G~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D~~~~~~~~~~~~aY~~VF~lEa~ll~~a 390 (403)
T PF03209_consen 311 LGLGNGLFTVGALSLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGGALRDLVRALFGNSPALAYGVVFALEAVLLLAA 390 (403)
T ss_pred HHHhhhHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999988652 24666777777666666
Q ss_pred HHHHHH
Q 012902 216 FTVWLS 221 (454)
Q Consensus 216 ~~~~~~ 221 (454)
+.+...
T Consensus 391 ~~ll~~ 396 (403)
T PF03209_consen 391 LVLLGR 396 (403)
T ss_pred HHHHHH
Confidence 554443
No 249
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=98.70 E-value=8.3e-07 Score=78.49 Aligned_cols=362 Identities=11% Similarity=0.073 Sum_probs=213.9
Q ss_pred hhcCCChhhHH-HHHHHHHHHHHHhhhhhhhhhccccchHHHHHHHHHHHHHHhhhhhcccccHHHHHHHHHHHHhhccc
Q 012902 74 AEFNWNPATVG-LIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMGIGEGV 152 (454)
Q Consensus 74 ~~~~~s~~~~g-~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~r~l~G~~~g~ 152 (454)
.+.|++..++. -+.-...-.+.+.-.+.=.+.|..-.|++++.-.+-......+.-+.+ +.+.+=+.-+..|...+
T Consensus 34 p~~NlT~~~l~~evyPvwTYSYLv~LvpvFlLTD~lrYKPvivlq~ls~v~~w~~lv~g~--sV~~mQvlE~FyG~~tA- 110 (433)
T KOG3810|consen 34 PDKNLTEDQLTNEVYPVWTYSYLVGLVPVFLLTDYLRYKPVVVLQALSGVPVWIMLVFGP--SVKAMQVLEFFYGPATA- 110 (433)
T ss_pred CCCCccHHHHhcccccchhHHHHHHHHHHHHHhhhhhcceeeeeeccchhHHHHHHHhcC--CchheeeehhhcChHHH-
Confidence 44566665543 122233334444455555689999999998887777777777778888 88888888999999866
Q ss_pred chhhhhHHHhhhcCccchHHHHHHHHhhHHHHHHhHHhHHHHHhhccCcc--hhHHHHhHHHHHHHHHHHHhcCCCCCCC
Q 012902 153 AMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWP--SVFYSFGSLGTVWFTVWLSKAHSSPAED 230 (454)
Q Consensus 153 ~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~ig~~l~~~l~~~~gwr--~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (454)
...+-++++-+..+|+++.++.|...++.-.|...|..++..+.+.-.+. ..=.+. ............++|..++..
T Consensus 111 aEIAYysYIYs~Vd~~~Yqrvt~y~RaA~L~g~~~g~vlaQlLvs~~~~sy~~LN~IS-L~~~~ia~~~A~fLP~v~rSl 189 (433)
T KOG3810|consen 111 AEIAYYSYIYSKVDPEMYKRVTGYCRAAFLVGKFVGSVLAQLLVSLETLSYTTLNYIS-LAEVTIAVLLALFLPRVKRSL 189 (433)
T ss_pred HHHhhhheeeeecCHHHHHHHHHHhHHHHHHHhHHHhHHHHHHhhhcccchhhhchhh-HHHHHHHHHHHhhCCCCchhh
Confidence 45777899999999999999999999999999999999998887643322 221222 122222233334455444221
Q ss_pred CCCChhhhhhhhhccccCCCC-C------------CcchhHhhcCcchHHHHHHHHHHHHHHHHHHhhHHHHHHHHh-CC
Q 012902 231 PQLRPAEKKLIVSSCASKEPV-K------------TIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVL-HF 296 (454)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~-~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-g~ 296 (454)
-..+.+++.. ..+.++..+. + ..++++..+||.+..-.+-+.+...+++-...+....-++.- +-
T Consensus 190 ~f~~~~~~~~-v~~~e~~~~~~~~~~~l~~~~~~l~~~l~~~y~np~ll~WSlWwAl~scg~~QV~nY~Q~LW~~~~~~~ 268 (433)
T KOG3810|consen 190 YFHRLEDKIS-VGDLEEMNPQASYMSYLRGAFVLLWRDLQECYSNPRLLKWSLWWALASCGYYQVTNYTQILWKEVAPNP 268 (433)
T ss_pred hhhcccccce-eccchhcCccchhhHHHHHHHHHHHHHHHHHhcCchhhhhHHHHHHhhchhHHHHHHHHHHHHhhCCCc
Confidence 1111111110 0111111110 0 123445667888887777777777777777666555444431 11
Q ss_pred cccchhhHhHHHHHHHHHHHHHHHHHhhhhhhcCccchhhHHHHHHHHHHHHHHHHHHhhccChhHHHHHHHHHH-Hhhh
Q 012902 297 NLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLCMACS-QGTD 375 (454)
Q Consensus 297 s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 375 (454)
....-|..=++..+.++++.+..|.+--.+.|+ +..++.++.+..+..++......+.|+..+...+. ....
T Consensus 269 ~~vyNG~veAv~tlLGa~~~~~~g~l~i~w~r~-------g~~ll~~~s~~~agllf~m~~t~~Iw~~Ya~yvlfr~~y~ 341 (433)
T KOG3810|consen 269 ANVYNGAVEAVSTLLGAIAALAAGYLNINWNRW-------GDLLLAVGSAVQAGLLFIMAQTQHIWVCYAGYVLFRVIYQ 341 (433)
T ss_pred hhhhcCHHHHHHHHHHHHHHHHHHheeeccchh-------hHHHHHHHHHHhhhhhhhhhcccceehhhhhHHHHHhhHh
Confidence 111124455666677788888888886666655 34555555555555555555555555544444433 3333
Q ss_pred hhhcchhhhhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHhccC-----------CchhHHHHHHHHHHHHHHHHH
Q 012902 376 AFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHG-----------SWDDVFKVSVGLYLVGTAVWN 444 (454)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~-----------g~~~~~~~~~~~~~~~~~~~~ 444 (454)
..........+.....|.-|...|+...+.-+-.. .+.-...|.- -|..-|.+.+.+.++...+..
T Consensus 342 l~itiA~~~iA~nL~~e~~gLvFGiNTFvAl~lQs---ilT~iVvd~~g~~L~ir~Q~~~Y~~Yf~v~~~i~~~~~~~~~ 418 (433)
T KOG3810|consen 342 LTITIATFQIARNLSSELFGLVFGINTFVALILQS---ILTLIVVDDRGLGLDIRTQFVVYSSYFIVLGVIFLIGFGIEY 418 (433)
T ss_pred hhhhHHHHHHHHhhhhhhheeeeehHHHHHHHHHH---hheEEEEcccccCCCcceeEEEEeehHHHHHHHHHHHHHHHH
Confidence 33444444555677778889999986555433332 2222334431 144567888888887766555
Q ss_pred HhccCC
Q 012902 445 LFSTGE 450 (454)
Q Consensus 445 ~~~~~~ 450 (454)
...++.
T Consensus 419 ~~~~~~ 424 (433)
T KOG3810|consen 419 LMCRRN 424 (433)
T ss_pred HHhhcC
Confidence 544433
No 250
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.70 E-value=3e-07 Score=88.14 Aligned_cols=150 Identities=17% Similarity=0.175 Sum_probs=109.3
Q ss_pred HhCCcccchhhHhHHHHHHHHHHHHHHHHHhhhhhhcCccchhhHHHHHHHHHHHHHHHHHHhhcc-ChhHHHHHHHHHH
Q 012902 293 VLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHV-DSPAMAVLCMACS 371 (454)
Q Consensus 293 ~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 371 (454)
++++++.+.+++++....+.+++.+..|++.||+|.|++.. ....+......+...... +.+..++.=++.|
T Consensus 67 ~~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~~-------~~~~~sa~~t~l~P~aa~~~~~~~~~~R~lqG 139 (466)
T KOG2532|consen 67 EYDWSSTEKGLIFSSFFWGYILGQIPGGYLADKFGARRVFF-------ISGLISALLTLLTPLAASIGFYLLLVLRFLQG 139 (466)
T ss_pred eecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHcCchHHHH-------HHHHHHHHHHHHHHHHHHhcchhhHHHHHHhH
Confidence 57888999999999999999999999999999999995332 222222222222222222 2223333344445
Q ss_pred HhhhhhhcchhhhhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHhcc-CCchhHHHHHHHHHHHHHHHHHHhccC
Q 012902 372 QGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQH-GSWDDVFKVSVGLYLVGTAVWNLFSTG 449 (454)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~ 449 (454)
.+.+...+........=.||++|++..++.....++|..++-++.|.+.+. .||+..|++.+++.++..+++.++.++
T Consensus 140 l~~g~~~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~g~~g~i~~~~w~~~~~d 218 (466)
T KOG2532|consen 140 LGQGVLFPAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYVFGIVGLIWFILWFLFYSD 218 (466)
T ss_pred HHHhHHHhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHHHHHHHHHHHHHHHHHHhcC
Confidence 454544444444444556778999999999999999999999999999999 999999999999999888888776543
No 251
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=98.54 E-value=6.4e-10 Score=108.12 Aligned_cols=164 Identities=13% Similarity=0.050 Sum_probs=111.9
Q ss_pred hhhhcchhhhhhcCCChhhHHHHHHHHHHHHHHhhhhhhhhhccccchHHHHHHHHHHHHHHhhhh--h--ccccc---H
Q 012902 64 NMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTP--V--AAKLG---L 136 (454)
Q Consensus 64 ~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~l~~--~--~~~~~---~ 136 (454)
......+.+.++.+.+.. -.......+...++.+....+.||+|||+.++.+..+.+++.+..+ . .++.+ -
T Consensus 271 ~~~~~~~~i~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~GRr~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (451)
T PF00083_consen 271 FIFYYSPSIFENAGISNS--FLATLILGLVNFLGTLLAIFLIDRFGRRKLLIIGLLLMAICSLILGIIFFLGVSSSSWWS 348 (451)
T ss_pred cccccccccccccccccc--cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 334445667777776666 2222334455556777777999999999999999988888877775 1 11100 1
Q ss_pred HHHHHHHHHHHhhcc-cchhhhhHHHhhhcCccchHHHHHHHHhhHHHHHHhHHhHHHHHhhccCcchhHHHHhHHHHHH
Q 012902 137 PFLLVVRVFMGIGEG-VAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVW 215 (454)
Q Consensus 137 ~~l~~~r~l~G~~~g-~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~ig~~l~~~l~~~~gwr~~f~~~~~~~~~~ 215 (454)
...++.-.+...+.+ ...+....+.+|.+|.+.|++..++......++..+++.+...+.+..+-...+.+.+.++++.
T Consensus 349 ~~~i~~~~l~~~~~~~g~~~~~~~~~~ElfPt~~R~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~i~ 428 (451)
T PF00083_consen 349 ILSIVFLALFFAFFSLGWGPLPWIYTAELFPTKVRSTGIGLSYAVGRIGGFIIPFLFPYLFNNLGGWGVFLIFAGVCLIA 428 (451)
T ss_pred cccceeeeeccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccchhhHHHHHHH
Confidence 111222222222222 3446666888999999999999999999999999999988888877666455667777777777
Q ss_pred HHHHHHhcCCCCCC
Q 012902 216 FTVWLSKAHSSPAE 229 (454)
Q Consensus 216 ~~~~~~~~~~~~~~ 229 (454)
.+..+++.||+..+
T Consensus 429 ~i~~~~~lpET~g~ 442 (451)
T PF00083_consen 429 IIFVYFFLPETKGK 442 (451)
T ss_pred HhheeEEEeeCCCC
Confidence 77788888987543
No 252
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=98.50 E-value=4.3e-06 Score=67.04 Aligned_cols=108 Identities=13% Similarity=0.174 Sum_probs=92.4
Q ss_pred HHHHHHHHHHHhhhhhhhhhccccchHHHHHHHHHHHHHHhhhhhcccccHHHHHHHHHHHHhhcccchhhhhHHHhhhc
Q 012902 86 IQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWV 165 (454)
Q Consensus 86 ~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~ 165 (454)
-.++......+..++.+.+.+++|.|+.+++|.+.+.+-.+.. +-+ +.+.++.+-++.|++.+..++..-.++.+..
T Consensus 42 slai~Y~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~~~-~~~--~~~~l~~~s~l~G~~~a~lW~aqg~ylt~~s 118 (156)
T PF05978_consen 42 SLAILYGSFAISCLFAPSIVNKLGPKWSMILGSLGYAIYIASF-FYP--NSYTLYPASALLGFGAALLWTAQGTYLTSYS 118 (156)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHHH-Hhh--hHHHHHHHHHHHhhhhHHhhHhhhHHHHHcC
Confidence 4456666677888888999999999999999999988665544 566 7889999999999999999999999999999
Q ss_pred CccchHHHHHHHHhhHHHHHHhHHhHHHHHh
Q 012902 166 PVAERSRSLALVYSGMYLGSVTGLAFSPFLI 196 (454)
Q Consensus 166 ~~~~rg~~~~~~~~~~~~g~~ig~~l~~~l~ 196 (454)
++++|++..+++......+.++|..+.-.+.
T Consensus 119 ~~~~~~~~~~ifw~i~~~s~i~G~~~~~~~~ 149 (156)
T PF05978_consen 119 TEETIGRNTGIFWAIFQSSLIFGNLFLFFIF 149 (156)
T ss_pred CHHHHhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999998888888887665543
No 253
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=98.50 E-value=4.4e-06 Score=82.49 Aligned_cols=185 Identities=17% Similarity=0.093 Sum_probs=120.4
Q ss_pred hHHHHHHHHHHHHHHHHhhhchhhhhcchhhhhhcCCChhhHHHHHHHHHHHHHHhhhhhhhhhccccchHHHHHHHHHH
Q 012902 42 YKQIISLCVGNFEQIFIVFGQVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWW 121 (454)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~ 121 (454)
++.....+.+..+ ....+........+.+.++-+.+... .+...+..+...++..+...+.||+|||+.++.+...+
T Consensus 293 ~~~~~i~~~l~~f--qq~tG~~~~~~Y~~~if~~~g~~~~~-~~~~~~~~~v~~~~t~~~~~lvd~~gRr~lll~s~~~m 369 (513)
T KOG0254|consen 293 RKRLIIGLLLQLF--QQLTGINYVFYYSTTIFKSAGLKSDT-FLASIILGVVNFLGTLVATYLVDRFGRRKLLLFGAAGM 369 (513)
T ss_pred HHHHHHHHHHHHH--HHHhCCceEEeehHHHHHhcCCCCch-HHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHhHHHH
Confidence 3344444444444 23333344455566777777766443 55555666677777778899999999999999999999
Q ss_pred HHHHhhhhhcccc-----------cHHHHHHHHHHHHhhcccchhhhhHHHhhhcCccchHHHHHHHHhhHHHHHHhHHh
Q 012902 122 SIATALTPVAAKL-----------GLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLA 190 (454)
Q Consensus 122 ~~~~~l~~~~~~~-----------~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~ig~~ 190 (454)
.++.++++..... ....+...-+..........+....+.+|.+|.+-|+++.++......+...+-..
T Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~f~~g~g~v~w~~~sEifp~~~r~~~~s~~~~~n~~~~~~v~~ 449 (513)
T KOG0254|consen 370 SICLVILAVVGVFALYYPNSSKGAGWLAIVFLCLFIFSFAIGWGPVPWVIVSEIFPLRLRSKGASLAVAVNWLWNFLISF 449 (513)
T ss_pred HHHHHHHHHHHHHhccCCCcccchhHHHHHHHHHHHHHHhcccccchhhhhhccCcHhHHhhhHHHHHHHHHHHHHHHHH
Confidence 9999988754210 11222222333333333345666678899999999999999987777666555444
Q ss_pred HHHHHhhccCcchhHHHHhHHHHHHHH-HHHHhcCCCCCC
Q 012902 191 FSPFLIHRFGWPSVFYSFGSLGTVWFT-VWLSKAHSSPAE 229 (454)
Q Consensus 191 l~~~l~~~~gwr~~f~~~~~~~~~~~~-~~~~~~~~~~~~ 229 (454)
....+.+..++...|...+..+.+... ..+++.||+...
T Consensus 450 ~~~~~~~~~~~~~~f~~f~~~~~~~~~~fv~~~~pETkg~ 489 (513)
T KOG0254|consen 450 FFPFITEALGIGGTFGYFGGICLLSLIIFVFFFVPETKGL 489 (513)
T ss_pred HHHHHHHhccccchHHHHHHHHHHHHHHHheEEcccCCCC
Confidence 444444444456778777777777766 677777876543
No 254
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=98.46 E-value=2.7e-07 Score=84.83 Aligned_cols=169 Identities=10% Similarity=-0.013 Sum_probs=116.9
Q ss_pred HhhhchhhhhcchhhhhhcCCChhhHHH--------HHHHH-HHHHHHhhhhhhhhhccccchHHHHHHHHHHHHHHhhh
Q 012902 58 IVFGQVNMSIAILPMSAEFNWNPATVGL--------IQSSF-FWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALT 128 (454)
Q Consensus 58 ~~~~~~~~~~~~~~i~~~~~~s~~~~g~--------~~s~~-~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~l~ 128 (454)
.....+..+.....+.++++..+.+... ...+. ..++..+-++...+.|++|||++.+.|.+++++..+..
T Consensus 316 lDiafy~~nL~~s~I~~~ig~~~~~~~~~~~~~vA~~~~iia~~~~vPGyw~tv~~id~iGRk~iq~~GF~~~~i~~~~~ 395 (538)
T KOG0252|consen 316 LDIAFYGQNLFQSVIFSAIGVIPSANTYHELFKVAEGNLIIAVCSTVPGYWFTVYFIDIIGRKYIQLMGFFIMTIFFFVI 395 (538)
T ss_pred hhhhhhccccHHHHHHHhhccCCCcchHHHHHHHHHHHHHHHHHccCCceeEEEEEeehhhhHHHHHhhHHHHHHHHHHH
Confidence 3344444444556677766654433222 22222 22333477778889999999999999999999999988
Q ss_pred hhccccc----HHHHHHHHHHHHhhcc-cchhhhhHHHhhhcCccchHHHHHHHHhhHHHHHHhHHhHHHHHhh-----c
Q 012902 129 PVAAKLG----LPFLLVVRVFMGIGEG-VAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIH-----R 198 (454)
Q Consensus 129 ~~~~~~~----~~~l~~~r~l~G~~~g-~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~ig~~l~~~l~~-----~ 198 (454)
+... | -.-+++...+..+... +-......+-+|.+|.+-|+...|+..+..-.|.++|...-.++.+ .
T Consensus 396 ~~~y--~~~~~~~Gf~v~y~l~~ff~NFGPn~ttfivpaE~FParvR~t~hGIsAA~GK~GAivg~~~F~~~t~~~yp~~ 473 (538)
T KOG0252|consen 396 AGPY--NQLENTIGFVVLYSLTFFFGNFGPNATTFIVPAEIFPARVRSTCHGISAASGKAGAIVGAFGFLYLTDHNYPPN 473 (538)
T ss_pred cCCc--ccccccCceeehHHHHHHHHhcCCCceeEEeehhhchHHHhhhhhhHHHHhccchHHHHHHHhhHhhhccCCcc
Confidence 8776 4 1222233223332221 1223334567999999999999999999999999999999999988 7
Q ss_pred cCcchhHHHHhHHHHHHHHHHHHhcCCCCCC
Q 012902 199 FGWPSVFYSFGSLGTVWFTVWLSKAHSSPAE 229 (454)
Q Consensus 199 ~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~ 229 (454)
.|.|+.+++.+..+++..+..++ .||+..+
T Consensus 474 ~g~~~v~~i~~~~~~~gi~~T~l-~pEtk~~ 503 (538)
T KOG0252|consen 474 IGVRNVFIILAGCMLLGILFTLL-IPETKGK 503 (538)
T ss_pred ccchHHHHHHHHHHHHhHheeEE-eeccccc
Confidence 78999999999998888666655 4565543
No 255
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=98.44 E-value=0.0016 Score=61.30 Aligned_cols=256 Identities=8% Similarity=-0.002 Sum_probs=153.2
Q ss_pred hhhhhcC---CChhhHHHHHHHHHH-HHHHhhhhhhhhhccccchHHHHHHHHHHHHHHhhhhhccc-------------
Q 012902 71 PMSAEFN---WNPATVGLIQSSFFW-GYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAK------------- 133 (454)
Q Consensus 71 ~i~~~~~---~s~~~~g~~~s~~~~-~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~l~~~~~~------------- 133 (454)
.+.+.+. .+++.+.++=+..-+ +..+..++.+++.+++.+.+++-.-+..+....+++++.-.
T Consensus 48 ~lKDslvv~~~gae~I~FlK~~~vlP~avif~~iy~kl~~~lt~~~vF~~~~~~F~~fF~LFa~Vi~P~~~~~hp~~~~~ 127 (509)
T COG3202 48 SLKDSLVVTRQGAESISFLKTWGVLPSAVIFTIIYQKLLNILTREKVFYIILGFFLGFFALFAFVIYPYKDILHPDPEFS 127 (509)
T ss_pred HhhhheEeecCcchhhHHHHHHHhchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHhccccccCCCHHHH
Confidence 3444443 356778888888887 77889999999999999999988877777777777765310
Q ss_pred -------c----------cHHHHHHHHHHHHhhcccchh-hhhHHHhhhcCccchHHHHHHHHhhHHHHHHhHHhHHHHH
Q 012902 134 -------L----------GLPFLLVVRVFMGIGEGVAMP-AMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFL 195 (454)
Q Consensus 134 -------~----------~~~~l~~~r~l~G~~~g~~~~-~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~ig~~l~~~l 195 (454)
+ +.|...+.-++.-+=.....+ .-.....|.+..+|-.|..++++.+.+++..++..+..++
T Consensus 128 ~~~~~~~p~~l~~~ili~~~Ws~s~~Yi~aELWgslV~S~lFw~faNeitt~~eakRFy~lf~l~~ni~lllsg~~~~~~ 207 (509)
T COG3202 128 RDLFADLPMFLKWFILIVGEWSYSLFYIMAELWGSLVLSLLFWQFANEITTIEEAKRFYPLFGLGANISLLLSGEVTSWL 207 (509)
T ss_pred HHHHhhCCccceeeeEeecchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 113333334444333333333 4456778999889999999999999999999999888888
Q ss_pred hhcc-C---------cchhHHHHhHHHHHHHHHHHHhcCCCCCCCCCCChhhhhhhhhccccCCCCCCcchhHhhcCcch
Q 012902 196 IHRF-G---------WPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPV 265 (454)
Q Consensus 196 ~~~~-g---------wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (454)
.++. . -+..+.+.+..+++...+..+.-+...+++. ...+..+ .++.+..+-....+++.+.|.|.+
T Consensus 208 ~k~~~~~~~~~~~~~~~~~~~vi~~~~~i~~~l~~~~~r~il~~~~-f~~~~~~--kk~~~k~k~~~~~s~k~i~~SkyL 284 (509)
T COG3202 208 SKHRDALASEFKDLLLQILFIVIVILGIIAILLYRYINRNVLTDPL-FYLRAKK--KKKKKKLKLGLIESFKMILRSKYL 284 (509)
T ss_pred hhchhhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcc-hhHHHhc--ccccccccCcHHHHHHHHHhhhHH
Confidence 7631 1 2334444444444444433333222221111 0000000 000001111123466778889999
Q ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCcccch---hhHhHHHHHH-HHHHHHHHHHHhhhhhhc
Q 012902 266 WALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTES---GLFCVLPWLT-MAFSANLGGWIADTLVSK 329 (454)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~---~~~~~~~~~~-~~~~~~~~g~l~dr~~~~ 329 (454)
+.+.+...+++.+.+.+....-.-.++.+..+.+.. |.+....++. .++....++.+.+|.|-.
T Consensus 285 ~~ial~vl~Y~v~inLvE~~wKs~ik~~~~~~~~~~~f~~~~~~~tgvv~~v~~~~~~s~~ir~~GW~ 352 (509)
T COG3202 285 GAIALLVLAYGVSINLVEGVWKSGIKELYPTTNEYTAFMGRFQIWTGVVSLVVFLFPGSNLIRRVGWF 352 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhHH
Confidence 999888888888887776555444444333332222 3333344444 334455677777777754
No 256
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=98.41 E-value=7.6e-06 Score=71.23 Aligned_cols=144 Identities=12% Similarity=0.051 Sum_probs=86.3
Q ss_pred HHHHhhHHHHHHHHhCCcccchhhHhHHHHHHHHHHHHHHHHHhhhhhhcCccchhhHHHHHHHHHHHHHHHH--HHhhc
Q 012902 280 FILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFL--TQLSH 357 (454)
Q Consensus 280 ~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 357 (454)
+.+..|.| .+++.+|+|.+|...+.....++..+| +..|.+.||+|++. .+.++.+.....+ .....
T Consensus 19 Y~Fs~yS~-~Lk~~l~~sq~~l~~l~~~~~~G~~~G-~~~G~l~d~~gp~~---------~l~iG~~~~~~GY~~~~l~~ 87 (250)
T PF06813_consen 19 YTFSAYSP-QLKSRLGYSQSQLNTLSTAGDIGSYFG-ILAGLLYDRFGPWV---------VLLIGAVLGFVGYGLLWLAV 87 (250)
T ss_pred cchhhhhH-HHHHHhCCCHHHHHHHHHHHHHHhhcc-HHHHHHHHhcchHH---------HHHHHHHHHHHHHHHHHHHH
Confidence 44444444 456679999999999999988888775 88999999999883 2222222222211 11111
Q ss_pred c-----ChhHHHHHHHHHHHhhhhhhcchhhhhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHH
Q 012902 358 V-----DSPAMAVLCMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVS 432 (454)
Q Consensus 358 ~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~ 432 (454)
. .+.+.......++................+-.|++||++.|+.-....+++++-..+...+.+. +....+.+.
T Consensus 88 ~~~i~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP~~RG~vvgilk~~~GLSaai~t~i~~~~f~~-~~~~fll~l 166 (250)
T PF06813_consen 88 SGRIPSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFPRSRGTVVGILKGFFGLSAAIFTQIYSAFFGD-DPSSFLLFL 166 (250)
T ss_pred hCccCccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCccccCceehhhhHHHHhHHHHHHHHHHHHcCC-ChHHHHHHH
Confidence 1 1222332222333222222223333333344578999999999999999999988888888776 333333333
Q ss_pred HHH
Q 012902 433 VGL 435 (454)
Q Consensus 433 ~~~ 435 (454)
+..
T Consensus 167 a~~ 169 (250)
T PF06813_consen 167 AVL 169 (250)
T ss_pred HHH
Confidence 333
No 257
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=98.39 E-value=0.00034 Score=68.94 Aligned_cols=156 Identities=14% Similarity=0.140 Sum_probs=123.9
Q ss_pred hhhcchhhhhhcCCChhhHHHHHHHHHHHHHHhhhhhhhhhcc-ccchHHHHHHHHHHHHHHhhhhhcc-----------
Q 012902 65 MSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADT-VGGKAVLGFGVVWWSIATALTPVAA----------- 132 (454)
Q Consensus 65 ~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr-~Grr~~~~~~~~~~~~~~~l~~~~~----------- 132 (454)
..+.+..+.++++.+...+.-..+.+.-......+..+.++|- +||-+++.++.++..+|..+..++.
T Consensus 57 ~~nlv~ylt~~~~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry~tI~~~s~i~~~G~~~lt~~a~~~~l~p~~~~ 136 (571)
T KOG1237|consen 57 VSNLVTYLTLELHASGGGAANNVNAFGGTQFLLPLLGAFLADSFLGRYFTINIGSLISLLGLFGLTLSAMIPALLPFMCK 136 (571)
T ss_pred hhHHHHHHHHHhccchHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcccc
Confidence 4567778889999988888888888888888999999999996 6788889999888888865443211
Q ss_pred ---------cc---cHHHHHHHHHHHHhhcccchhhhhHHHhhhcC---c-cc--hHHHHHHHHhhHHHHHHhHHhHHHH
Q 012902 133 ---------KL---GLPFLLVVRVFMGIGEGVAMPAMNNILSKWVP---V-AE--RSRSLALVYSGMYLGSVTGLAFSPF 194 (454)
Q Consensus 133 ---------~~---~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~---~-~~--rg~~~~~~~~~~~~g~~ig~~l~~~ 194 (454)
.. ....++.+.-+..+|.|+.-|...++=+|-++ + ++ +...+.++....+.|..++..+..+
T Consensus 137 ~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~~~~fFnW~yf~~~~g~l~a~t~~vy 216 (571)
T KOG1237|consen 137 FKPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEVKGIPSFFNWFYFSQNGGALLAQTVLVY 216 (571)
T ss_pred CCCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcccccCccCcchhhCcccchhHHHHHHHHHHHHHHHHHHh
Confidence 00 11367777888889999999999999999997 2 22 2367889999999999999999888
Q ss_pred HhhccCcchhHHHHhHHHHHHHHHHH
Q 012902 195 LIHRFGWPSVFYSFGSLGTVWFTVWL 220 (454)
Q Consensus 195 l~~~~gwr~~f~~~~~~~~~~~~~~~ 220 (454)
.-++.||.+.|.+..+...++.++.+
T Consensus 217 iq~~~~w~lgf~i~~~~~~lai~iF~ 242 (571)
T KOG1237|consen 217 IQDNVGWKLGFGIPTVLNALAILIFL 242 (571)
T ss_pred hhhcccceeeccHHHHHHHHHHHHHH
Confidence 88889999999998877777655444
No 258
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.39 E-value=5e-06 Score=80.10 Aligned_cols=148 Identities=14% Similarity=0.099 Sum_probs=104.3
Q ss_pred HHhCCcccchhhHhHHHHHHHHHHHHHHHHHhhhhhhcCccchhhHHHHHHHHHHHHHHHHHHhhccChhHHHHHHHHHH
Q 012902 292 QVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLCMACS 371 (454)
Q Consensus 292 ~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 371 (454)
+..+....+-+...+.+.++.+++.+.++.+.||++..+ .+....+........... .++.+.+++.-++.
T Consensus 74 edl~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~~ls~--------~l~~~~~~w~~~~~~~~~-~~s~~~~ialr~ll 144 (495)
T KOG2533|consen 74 EDLKLVGNQLGVLDTVFYVGYIIGQFPSGLLGDRFPLSK--------GLSVSGILWGLFGFLTAA-VHSFPGLIALRFLL 144 (495)
T ss_pred cccchhhhhhhhHHHHHHHHHHHHHhhHHHHHHhCChHH--------HHHHHHHHHHHHHHHHHH-HhhhHHHHHHHHHH
Confidence 335677788899999999999999999999999999442 222333332222222222 34444444544444
Q ss_pred Hhhhhhhcchhhhhh-cccccccchhHHHHHHHHHHHHHHHHHHHHHHHhc------cCCchhHHHHHHHHHHHHHHHHH
Q 012902 372 QGTDAFSQSGLYSNH-QDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQ------HGSWDDVFKVSVGLYLVGTAVWN 444 (454)
Q Consensus 372 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~------~~g~~~~~~~~~~~~~~~~~~~~ 444 (454)
+.+.+...|....+. .-..+++|+..+|+.+...++|+++|+.+...+.+ ..||++.|++-+++.++..++.+
T Consensus 145 Gl~es~~wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~gW~~~FiI~G~i~~~~gi~~f 224 (495)
T KOG2533|consen 145 GLFESGGWPGVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAGWRWLFIIEGVITLVLGIVVF 224 (495)
T ss_pred HHHhcccchHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcCCceeehhHHHHHHHHHHheEE
Confidence 444555555555555 44555799999999999999999999999998743 37999999999998888776665
Q ss_pred Hhcc
Q 012902 445 LFST 448 (454)
Q Consensus 445 ~~~~ 448 (454)
+..+
T Consensus 225 ~~lp 228 (495)
T KOG2533|consen 225 FFLP 228 (495)
T ss_pred EEec
Confidence 5544
No 259
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=98.33 E-value=2.6e-05 Score=74.61 Aligned_cols=149 Identities=17% Similarity=0.204 Sum_probs=121.8
Q ss_pred HHHHHHHHHHHHHHHhhhchhhh-hcchhhhhhcCCChhhHHHHHHHHHHHHHHhhhhhh-hhhccccchHHHHHHHHHH
Q 012902 44 QIISLCVGNFEQIFIVFGQVNMS-IAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGG-IWADTVGGKAVLGFGVVWW 121 (454)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g-~l~dr~Grr~~~~~~~~~~ 121 (454)
..+.++...++ ....+..... ...-.+...++.++.+.+...+.......+++.+.. .+...+|-|+++..|++.-
T Consensus 241 ~~l~l~l~~~~--~~~~~~~~~~~~~~~yl~~~f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~l~~~~~i~lGl~~~ 318 (463)
T KOG2816|consen 241 LLLLLLLVAFL--SSLPEAGGASDVLLLYLKAKFGWNKKEFSDLLSLVSILGIISQLLLLPLLSSILGEKRLISLGLLSE 318 (463)
T ss_pred cchHHHHHHHH--HHHHHhcCceeEEEEEEeeecCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhHHHHHH
Confidence 33444444444 3444433333 233446778999999999999988888888888887 7788899999999999999
Q ss_pred HHHHhhhhhcccccHHHHHHHHHHHHhhcccchhhhhHHHhhhcCccchHHHHHHHHhhHHHHHHhHHhHHHHHhh
Q 012902 122 SIATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIH 197 (454)
Q Consensus 122 ~~~~~l~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~ig~~l~~~l~~ 197 (454)
.+.....++++ +.|+++...++.++. ....|...+.++.+.+++++|++.++......+...++|.+-+.+..
T Consensus 319 ~~~~~~~af~~--~~w~~~~~~v~~~~~-~~~~pa~~s~~s~~v~~~e~g~v~~~is~i~~l~~~~~~~~~~~i~~ 391 (463)
T KOG2816|consen 319 FLQLLLFAFAT--ETWMMFAAGVVVALA-GIVFPAIRAFASILVSPEEQGKVFGIISGIEGLSGVVSPALYGNIFA 391 (463)
T ss_pred HHHHHHHHHhc--cchhhhHHHHHHHhh-cchhHHHHhHHHhhcccccccchhhHHHHHHHHhhhhhHHHHHHHHH
Confidence 99999999999 899999999888887 66889999999999999999999999999999999999998877654
No 260
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=98.33 E-value=7.4e-06 Score=81.26 Aligned_cols=141 Identities=16% Similarity=0.086 Sum_probs=103.3
Q ss_pred hCCcccchhhHhHHHHHHHHHHHHHHHHHhhhhhhcCccchhhHHHHHHHHHHHHHHHHHHhhccChhHHHHH-HHHHHH
Q 012902 294 LHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVL-CMACSQ 372 (454)
Q Consensus 294 ~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 372 (454)
...+.....+..+++.++..+|.++.|.++||+|||+ .+..+.+...+.-......++...... =++.++
T Consensus 113 ~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~---------~~~~~~~~~~i~~~~~a~a~~~~~~~~~Rfl~G~ 183 (521)
T KOG0255|consen 113 VCDSSTLVALGQSLFFLGVLVGSLIFGPLSDRFGRKP---------VLLVSLLLFIIFGILTAFAPNYWMFLIFRFLSGF 183 (521)
T ss_pred eeCcHhHHHHHHHHHHHHHHHHHhhheehHhhcccHH---------HHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHh
Confidence 4567777888899999999999999999999999994 333333333333333444455544444 444455
Q ss_pred hhhhhhcchhhhhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHHHHh
Q 012902 373 GTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWNLF 446 (454)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 446 (454)
+..+..........+..+|++|+.+..+ ......++.+++...+++.+ +|+..+++..+......+..++.
T Consensus 184 ~~~~~~~~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~--~Wr~~~~~~~~~~~~~~~~~~l~ 254 (521)
T KOG0255|consen 184 FGSGPLTVGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITR--DWRWLFWIISIPSGLFLLLWFLP 254 (521)
T ss_pred hccchhHHhHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHh--hHHHHHHHHHHHHHHHHHHHHcc
Confidence 5555555555555677888999999999 88888999999999999987 89999999888888777664443
No 261
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=98.29 E-value=0.00017 Score=65.26 Aligned_cols=148 Identities=11% Similarity=0.015 Sum_probs=87.3
Q ss_pred HhCCcccchhhHhHHHHHHHHHHHHHHHHHhhhhhhcCccchhhHHHHHHHHHHHHHHHHHHhhccChhHHHHHHHHHHH
Q 012902 293 VLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLCMACSQ 372 (454)
Q Consensus 293 ~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (454)
.+|++..+++.++..-.....+...+.|.+.||+|||+ .++..+++-.... +. -..++....+..=++++
T Consensus 63 ~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~--------~cl~~cily~~sc-l~-k~~~~~~~L~~GRvlgG 132 (354)
T PF05631_consen 63 SYGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRKK--------ACLLFCILYSLSC-LT-KHSSNYPVLLLGRVLGG 132 (354)
T ss_pred HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchH--------HHHHHHHHHHHHH-HH-HhccccHHHHHHHHHHH
Confidence 37999999999999999999999999999999999994 2222222222222 22 22233333333333333
Q ss_pred hhhhhhcchhhhhh------cccccccchhHHHHHH-HHHHHHHHHHHHHHHHHhccCC--chhHHHHHHHHHHHHHHHH
Q 012902 373 GTDAFSQSGLYSNH------QDIAPRYSGVLLGLSN-TAGVLAGVFGTAATGYILQHGS--WDDVFKVSVGLYLVGTAVW 443 (454)
Q Consensus 373 ~~~~~~~~~~~~~~------~~~~~~~~~~~~g~~~-~~~~~g~~~~~~~~g~l~~~~g--~~~~~~~~~~~~~~~~~~~ 443 (454)
.......+..-+.. ++.+++..+...+... ..+.+-.+.+..+...+.|..+ ...+|.....+.+++.++.
T Consensus 133 iaTSLLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~vaPF~~a~~~l~~~~~~I 212 (354)
T PF05631_consen 133 IATSLLFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFGFGPVAPFDAAIVLLAVAAVLI 212 (354)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCCcchHHHHHHHHHHHHHHH
Confidence 33333333222221 2334444555555544 2333445555666666777644 4788888888888887776
Q ss_pred HHhccCC
Q 012902 444 NLFSTGE 450 (454)
Q Consensus 444 ~~~~~~~ 450 (454)
....+|+
T Consensus 213 ~~~W~EN 219 (354)
T PF05631_consen 213 LKTWPEN 219 (354)
T ss_pred Hhccccc
Confidence 6555544
No 262
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=98.27 E-value=0.00029 Score=66.29 Aligned_cols=263 Identities=9% Similarity=-0.016 Sum_probs=137.1
Q ss_pred HHhhhchhhhhcchhhhhh--cCCChhhHHHHHHHHHHHHHHhhhhhhhh-----hccccchHHHHHHH-HHHHHHHhhh
Q 012902 57 FIVFGQVNMSIAILPMSAE--FNWNPATVGLIQSSFFWGYLLTQIAGGIW-----ADTVGGKAVLGFGV-VWWSIATALT 128 (454)
Q Consensus 57 ~~~~~~~~~~~~~~~i~~~--~~~s~~~~g~~~s~~~~~~~~~~~~~g~l-----~dr~Grr~~~~~~~-~~~~~~~~l~ 128 (454)
+.+.-.+.....+|.+.++ -+.|.+|.|...- ....+. .-++|.++ ..|+||||..++=. .+.++..+..
T Consensus 11 lQGiP~GL~~gsiPflL~~~~~~~sy~q~~~fSl-a~~PfS-lKlLWaPiVDs~y~~~~GRRKSWiiP~Q~l~g~~m~~l 88 (544)
T PF13000_consen 11 LQGIPLGLAFGSIPFLLQSMAKKVSYSQQAIFSL-ASYPFS-LKLLWAPIVDSVYSKRIGRRKSWIIPIQYLSGILMLYL 88 (544)
T ss_pred HcCcccccccccchhhhccccCCCChhHheeeee-eechhH-HHHhhhhhhhhhcccccCCcchhhhHHHHHHHHHHHHH
Confidence 4666555544567887777 5778888765422 122222 23455555 45899998854422 2333332222
Q ss_pred hhcc---------------c-------ccHHHHHHHHHHHHhhcccchhhhhHHHhhhcCccchHHHHHHHHhhHHHHHH
Q 012902 129 PVAA---------------K-------LGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSV 186 (454)
Q Consensus 129 ~~~~---------------~-------~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~ 186 (454)
+... . .+...+...-++.=+-.+....+.-.+.-....+++++.+......+.+.|..
T Consensus 89 ~~~i~~~~~~~~~~d~~~~~~~~~~~~~~i~~Lt~~F~~L~fl~ATQDIAVDGWALT~Ls~~n~~~ASTcqtvG~~~Gyf 168 (544)
T PF13000_consen 89 SYNISQWLLFDGVDDALLGQGESTVNNITIKFLTWFFFILVFLCATQDIAVDGWALTMLSPENVGYASTCQTVGQTAGYF 168 (544)
T ss_pred HhccchhhcccccchhhhcCCCCcccccchhHHHHHHHHHHHHHccCCceeehhhhhhcChhhcchHHHHHHhHhhhhHH
Confidence 2111 0 01112222222232333555666666766777788998888888888888887
Q ss_pred hHHhHHHHHhh-----cc--------Cc---chhHHHHhHHHHHHHHHHHHhcCCCCCCCCCC--Ch---hhhhhhhh--
Q 012902 187 TGLAFSPFLIH-----RF--------GW---PSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQL--RP---AEKKLIVS-- 243 (454)
Q Consensus 187 ig~~l~~~l~~-----~~--------gw---r~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~---~~~~~~~~-- 243 (454)
++..+--.+-+ .+ |. ..-..+.|.+.++.-+...++.+|+|..+... ++ .+.+.+..
T Consensus 169 ls~tvFlalns~~f~Nky~r~~p~~~glvtl~~yl~fwg~~~l~~T~~v~~~k~E~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (544)
T PF13000_consen 169 LSFTVFLALNSPDFCNKYLRSTPSDEGLVTLSGYLKFWGWVFLIVTILVAFFKKEKPHSESLPKIEPINKSDGKSKEISI 248 (544)
T ss_pred HHHHHHHhhCCHHHHHHhcccCCCCCCeeeHHHHHHHHHHHHHHHHHHHheEeecccccccCccccccccccccccccce
Confidence 77655444432 11 11 11122334444444455556566655322111 00 00000000
Q ss_pred ccccCC---CCCCc-------chhHhhcCcchHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCcccchhhHhHHHHHHHH
Q 012902 244 SCASKE---PVKTI-------PWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMA 313 (454)
Q Consensus 244 ~~~~~~---~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~ 313 (454)
+..+++ ..... ....++|-|++..+.+.....-.++.+-..-...=+.| .|++-++.+++..+..-..+
T Consensus 249 ~~~~~~~~~~~~~~~i~~~Y~~l~~ilkLp~V~~li~ilL~~KigF~a~da~T~LKLlE-kG~~KE~LAl~~li~~P~qi 327 (544)
T PF13000_consen 249 EYDESDVISTEEILSIKDVYKSLWKILKLPNVQTLIIILLTAKIGFQANDAVTSLKLLE-KGLSKEDLALLVLIDFPFQI 327 (544)
T ss_pred ecccccccchhhhhhHHHHHHHHHHHHcCchHHHHHHHHHHHHhccccchhhhHHHHHH-cCCCHHHhHHHHHHhhhHHH
Confidence 000111 11111 22346778999988888888888887777777777777 59998887776555444444
Q ss_pred HHHHHHHHH
Q 012902 314 FSANLGGWI 322 (454)
Q Consensus 314 ~~~~~~g~l 322 (454)
+.....+++
T Consensus 328 i~~~~~~Kw 336 (544)
T PF13000_consen 328 ILPYYIGKW 336 (544)
T ss_pred HHHHHhhhh
Confidence 444444433
No 263
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=98.22 E-value=1.4e-05 Score=75.44 Aligned_cols=110 Identities=17% Similarity=0.284 Sum_probs=88.7
Q ss_pred HHHHHHHHHHHHHHhhhhhcccc-------cHHHHHHHHHHHHhhcccchhhhhHHHhhhcCcc---chHHHHHHHHhhH
Q 012902 112 AVLGFGVVWWSIATALTPVAAKL-------GLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVA---ERSRSLALVYSGM 181 (454)
Q Consensus 112 ~~~~~~~~~~~~~~~l~~~~~~~-------~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~---~rg~~~~~~~~~~ 181 (454)
|++.+|.++..+|.++..++... +.+.++++-.+.++|.|+.-|...++.+|.++++ +|.+...++..+.
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~i 81 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGI 81 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHH
Confidence 56778888888888884433211 2367899999999999999999999999999765 5778889999999
Q ss_pred HHHHHhHHhHHHHHhhccCcchhHHHHhHHHHHHHHHHHH
Q 012902 182 YLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLS 221 (454)
Q Consensus 182 ~~g~~ig~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~ 221 (454)
++|..+++.+.+++.+++||.+.|.+.++..++..+..+.
T Consensus 82 n~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~f~~ 121 (372)
T PF00854_consen 82 NIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIVFLS 121 (372)
T ss_dssp HHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHHHHC
T ss_pred hhhhHhhcccchhhccccchhhhhhHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999988877777555443
No 264
>PF12832 MFS_1_like: MFS_1 like family
Probab=98.18 E-value=1.9e-05 Score=55.02 Aligned_cols=64 Identities=20% Similarity=0.265 Sum_probs=58.0
Q ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCcccchhhHhHHHHHHHHHHHHHHHHHhhhhhhcC
Q 012902 266 WALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKG 330 (454)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~ 330 (454)
+.+-..+++...+...+..++|.|+++ .|+|+.++|.+.++..+...++.++.|+++||.++++
T Consensus 3 ~~lk~~yf~~f~~~g~~~Pfl~~~~~~-~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~ 66 (77)
T PF12832_consen 3 LPLKAFYFFYFAALGCLYPFLPLYLKQ-LGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRK 66 (77)
T ss_pred hHHHHHHHHHHHHHHHHHhhhhHhhhh-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccH
Confidence 345567788888889999999999998 6999999999999999999999999999999999995
No 265
>PF12832 MFS_1_like: MFS_1 like family
Probab=98.18 E-value=8.6e-06 Score=56.76 Aligned_cols=64 Identities=14% Similarity=0.161 Sum_probs=54.2
Q ss_pred HhhhchhhhhcchhhhhhcCCChhhHHHHHHHHHHHHHHhhhhhhhhhccccchHHHHHHHHHH
Q 012902 58 IVFGQVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWW 121 (454)
Q Consensus 58 ~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~ 121 (454)
........-|.+|...++.|.|+.++|.+.++..+...++++++|.++||+++++.+.....++
T Consensus 12 ~f~~~g~~~Pfl~~~~~~~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~~~~ 75 (77)
T PF12832_consen 12 YFAALGCLYPFLPLYLKQLGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVILLGSLFM 75 (77)
T ss_pred HHHHHHHHHhhhhHhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHHHHH
Confidence 4444556667777788889999999999999999999999999999999999999877765543
No 266
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=98.05 E-value=0.00043 Score=63.93 Aligned_cols=111 Identities=10% Similarity=-0.035 Sum_probs=54.8
Q ss_pred HhhhchhhhhcchhhhhhcCCChhhHHHHHHHHHHHHH----HhhhhhhhhhccccchHHHHHHHHHHHHH--Hhhhhh-
Q 012902 58 IVFGQVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYL----LTQIAGGIWADTVGGKAVLGFGVVWWSIA--TALTPV- 130 (454)
Q Consensus 58 ~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~----~~~~~~g~l~dr~Grr~~~~~~~~~~~~~--~~l~~~- 130 (454)
....+..+..+.+++.+++-.+.. .......+.+... +....-.++.-|. |+++.........+. .+..+.
T Consensus 30 ~LlpWN~fiTa~~y~~~~~~~~~~-~~~F~~~~~~~a~i~~ll~~~~n~~~~~~~-~~~~~~~l~~~~il~i~~l~~~~v 107 (406)
T KOG1479|consen 30 TLLPWNMFITASDYYYYRFPGYHN-SKNFTSSYTLAAQIPLLLFNLLNAFLNTRL-RTRVGYLLSLIAILFIVTLDLALV 107 (406)
T ss_pred cccchHhhhccHHHHHhhcCCCch-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhh
Confidence 446777777778887777654333 3333334444444 4444444444452 222211111111111 111122
Q ss_pred ----cccccHHHHHHHHHHHHhhcccchhhhhHHHhhhcCccchH
Q 012902 131 ----AAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERS 171 (454)
Q Consensus 131 ----~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~rg 171 (454)
.+...+...++.-++.|.+.|..........++ +|+|.-.
T Consensus 108 ~~~~~~~~ff~vt~~~vv~~~~a~a~~qgs~~G~a~~-~P~~ytq 151 (406)
T KOG1479|consen 108 KTDTWTNGFFLVTLIIVVLLNLANAVVQGSLYGLAGL-FPSEYTQ 151 (406)
T ss_pred ccCCccchhHHHHHHHHHHHhhhhhhhccchhhhhhc-CCHHHHH
Confidence 111145566677788888888777777776655 4555433
No 267
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=98.03 E-value=0.00018 Score=61.79 Aligned_cols=240 Identities=11% Similarity=0.044 Sum_probs=115.3
Q ss_pred cchHHHHHHHHhhHHHHHHhHHhHHHHH---hh--ccCcchhHHHHhHHHHHHHHHHHHhcCCCCCCCCCCChhhhhhhh
Q 012902 168 AERSRSLALVYSGMYLGSVTGLAFSPFL---IH--RFGWPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIV 242 (454)
Q Consensus 168 ~~rg~~~~~~~~~~~~g~~ig~~l~~~l---~~--~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (454)
|+|+........+.++|.++.-..--.- .+ .-.|++.+.+.+.+.++.+++...+-.| -+....++++.
T Consensus 2 k~K~~~s~~n~~gf~iG~ii~~ipF~~~~~~~~~~~~~W~~I~si~~lL~~IpLIly~ifGk~--fd~~~~~~k~~---- 75 (267)
T PF07672_consen 2 KKKSILSQFNPWGFNIGTIIVNIPFLISSSVVIALTNNWQWILSIFILLIFIPLILYIIFGKN--FDIYSPKEKQE---- 75 (267)
T ss_pred CccceeeeeccccchhhHHHHHhhHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc--ccccCcccccc----
Confidence 5677777777888888887764332111 11 2259999999998888776666555222 11111110000
Q ss_pred hccccCCCCCCcchhHhhcCcchHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCccc---------c----hhhHhHHHH
Q 012902 243 SSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLT---------E----SGLFCVLPW 309 (454)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~---------~----~~~~~~~~~ 309 (454)
+.+.+..++.+.++.+|++..|...+.+....... ...+.+.+..+....++. . .......+.
T Consensus 76 --k~~~~~~~~~s~~~~LK~K~tw~w~~~Yg~wLv~~--V~p~t~~~~~~~~~~s~~ni~~~~~~~~~~~~~~~~~I~fv 151 (267)
T PF07672_consen 76 --KENSTLSKKPSYKSILKEKETWKWILIYGIWLVVV--VFPFTPSWFNILIWISPANIKSVVSGGGFNWIIPIFQILFV 151 (267)
T ss_pred --cccccccccchHHHHHccchHHHHHHHHHHHheeE--EEeccchhHhHhhhcCcccccccccccccchhhHHHHHHHH
Confidence 00011112467788999999998777766543322 112222333221222221 1 123333344
Q ss_pred HHHHHHHHHHHHHhhhhhhcCccchhhHHHHHHHHHHHHHHHHHH---hhccCh--hHHHHHHHHHHHhhhhhhcchhhh
Q 012902 310 LTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQ---LSHVDS--PAMAVLCMACSQGTDAFSQSGLYS 384 (454)
Q Consensus 310 ~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 384 (454)
.+..+|....|...+.--+||.... .+...+++........ ....+. ........++.+.+.-...+....
T Consensus 152 ~g~~~G~~~ig~~nkt~~kRk~fi~----~~~~~gi~~~~l~~~~~~~~g~~~~~~~~~f~I~~Fl~G~f~WgiQ~ViL~ 227 (267)
T PF07672_consen 152 AGYFLGPFTIGLWNKTNYKRKPFIH----FIISLGIVFFVLSIVVVYFVGPGNAAGFAFFYIFGFLAGFFLWGIQGVILN 227 (267)
T ss_pred HHHhhhceeeccchhhhhhhhhHHH----HHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhhhHHHhc
Confidence 4444555666666554444433221 1222222222221111 111111 111111222222222222222222
Q ss_pred hh---cccccccchhHHHHHHHHHHHHHHHHHHHHHHHhc
Q 012902 385 NH---QDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQ 421 (454)
Q Consensus 385 ~~---~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~ 421 (454)
.. .+..|++.|...|+....+++.-.+.-.+...+.|
T Consensus 228 lPhEyK~~~pk~ig~~Fg~iWGfGY~~yTi~~Ii~S~i~~ 267 (267)
T PF07672_consen 228 LPHEYKGYNPKKIGIQFGLIWGFGYIFYTIYDIILSVIAD 267 (267)
T ss_pred ChhhhcCCCcceehhHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 23 34456778999999888888887777766665543
No 268
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=97.95 E-value=0.00038 Score=69.96 Aligned_cols=162 Identities=13% Similarity=0.067 Sum_probs=103.1
Q ss_pred HHHHHHhhHHHHHHHHhCCcccchhhHhHHHHHHHHHHHHHHHHHhhhh-hhcCccchhhHHHHHHHHHH-HHHHHHHHh
Q 012902 278 GTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTL-VSKGLSVTTVRKIMQSIGFL-GPAFFLTQL 355 (454)
Q Consensus 278 ~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 355 (454)
.++++...+..|+.+.+|++...+..+...+....-+..+++|+++|++ |+++ .+....++ ..+..+...
T Consensus 2 syYGm~aiLvlYl~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~--------tIl~~~ii~~lG~~llai 73 (654)
T TIGR00926 2 SYYGMRTILVLYFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFK--------TILYLSIVYVVGHALLSF 73 (654)
T ss_pred ceeecHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHH--------HHHHHHHHHHHHHHHHHh
Confidence 3556677788888888999999998888888888888889999999985 4442 22222221 111111111
Q ss_pred hccC------hhHHHHHHHHHHHhhhhhhcchhhhhh-cccccc---cchhHHHHHHHHHHHHHHHHHHHHHHHhcc---
Q 012902 356 SHVD------SPAMAVLCMACSQGTDAFSQSGLYSNH-QDIAPR---YSGVLLGLSNTAGVLAGVFGTAATGYILQH--- 422 (454)
Q Consensus 356 ~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~---~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~--- 422 (454)
...+ ........+.++.++.+..-+...... +...++ .+-+...+.....++|+.+++.+.+++.+.
T Consensus 74 ~a~~~~~~~~~~~~~l~gLaLia~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~ 153 (654)
T TIGR00926 74 GAIPSSGHPLHDLLDLLGLALIALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGC 153 (654)
T ss_pred ccCcccccchHHHHHHHHHHHHHhhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 1110 111122233333333333344444444 333332 477888899999999999999999998744
Q ss_pred ----CCchhHHHHHHHHHHHHHHHHHHhc
Q 012902 423 ----GSWDDVFKVSVGLYLVGTAVWNLFS 447 (454)
Q Consensus 423 ----~g~~~~~~~~~~~~~~~~~~~~~~~ 447 (454)
.+|..+|.+.+++++++.++.....
T Consensus 154 fg~~~~~~~aF~i~~i~m~ia~lvf~~g~ 182 (654)
T TIGR00926 154 FGCQDCYPLAFGVPAILMILALIVFMAGS 182 (654)
T ss_pred cccCcchHHHHHHHHHHHHHHHHHHHHhc
Confidence 2688899999998888887766544
No 269
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=97.89 E-value=0.0033 Score=60.27 Aligned_cols=98 Identities=15% Similarity=0.011 Sum_probs=53.0
Q ss_pred HHHHHHHHhhhhhhhhhccccchHHHHHHHHHHHHHH----hhhhh-cc-cccHHHHHHHHHHHHhhcccchhhhhHHHh
Q 012902 89 SFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIAT----ALTPV-AA-KLGLPFLLVVRVFMGIGEGVAMPAMNNILS 162 (454)
Q Consensus 89 ~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~----~l~~~-~~-~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~ 162 (454)
...+...+..+..-.+..|+..|.=+..++++..+.. .+... .+ ...++..++.-++.|++.+.......++.+
T Consensus 53 ~~~v~~l~~~~~~~~~~~~i~~~~Ri~~~lv~~~~~~~~~~~l~~~~~~~~~~f~~~~~~v~~~g~~~~~~q~s~~gla~ 132 (437)
T TIGR00939 53 ASQLPSLLFNSLNLFLIFRIPVTVRLLGGLVILLVVVILVMVLVKVQTSETGFFVTTMASVVIINSGMALLQGSLFGLAG 132 (437)
T ss_pred HHHHHHHHHHHHHHHHhhccCccchhHHHHHHHHHHHHHHhheeeecCCcchHHHHHHHHHHHHHhhhhhhcccchhhcc
Confidence 4444455555555566666665322333333221111 11111 11 113566677788899999888888888666
Q ss_pred hhcCccchHHHHHHHHhhHHHHHHhHHhH
Q 012902 163 KWVPVAERSRSLALVYSGMYLGSVTGLAF 191 (454)
Q Consensus 163 ~~~~~~~rg~~~~~~~~~~~~g~~ig~~l 191 (454)
.+|++ .++.+..+.+++++++..+
T Consensus 133 -~fp~~----~~~a~~~G~g~aGv~~s~~ 156 (437)
T TIGR00939 133 -VFPST----YSSAVMSGQGLAGVLTSLA 156 (437)
T ss_pred -cCCHH----HHHHHHhcchhHHHHHHHH
Confidence 45543 4555566666666665543
No 270
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=97.87 E-value=0.00035 Score=66.41 Aligned_cols=179 Identities=13% Similarity=0.020 Sum_probs=101.9
Q ss_pred hHHHHHHHHHHHHHHHHHHhhHHHHHHH-HhCCcccchhhHhHHHHHHHHHHHHHHHHHhhhhhh-cCccchhhHHHHHH
Q 012902 265 VWALIVSHFCHNWGTFILLTWMPTYYNQ-VLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVS-KGLSVTTVRKIMQS 342 (454)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~-~~~~~~~~~~~~~~ 342 (454)
++...+..++....+..+..-.-.|+++ ..+-+.+..|++.+...++..++.+..|+...|.+. |+++..+ .
T Consensus 36 i~l~~~~sfl~~v~~sI~~~s~wpYl~~lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~~~~k~Pli~s------~ 109 (488)
T KOG2325|consen 36 IYLALLNSFLVAVQFSIYLTSMWPYLQKLDPTATATFFGLVIAASSLGHAIFSLIFGIWSNKTGSVKKPLIVS------F 109 (488)
T ss_pred HHHHHHHHHHHhhhheEEEeecchhhhhcCCCCCcchhhHHHHHHHHHHHhcchhhcccccccCCcccCHHHH------H
Confidence 3344444444444443344444467766 246677778999999999999999999999999985 3332221 1
Q ss_pred HHHHHHHHHHHHhhccCh-hHHHHHHHHHHHhhhhhhcchhhhhhc-ccccccchhHHHHHHHHHHHHHHHHHHHHHHHh
Q 012902 343 IGFLGPAFFLTQLSHVDS-PAMAVLCMACSQGTDAFSQSGLYSNHQ-DIAPRYSGVLLGLSNTAGVLAGVFGTAATGYIL 420 (454)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~ 420 (454)
+..+..-+.+.......+ ..+++...=+..|.+.......-.+.. ...+++|.++.+..+....+|..+||.+...+.
T Consensus 110 ii~~~g~llY~~l~~~~~~~~y~mL~~R~l~Gvg~~n~a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~f~ 189 (488)
T KOG2325|consen 110 LIAIIGNLLYLALAYVPNGVKYLMLVARILTGVGVGNFAVLRAYIADASTVEDRPRAFAATSGGFVLGIILGPTIQLAFT 189 (488)
T ss_pred HHHHHHHHHHHHHHhcccchHHHHHHHHHHcCcCcccHHHHHHHHHhccCccchHHHHHHhhhHHHHHHHHhHHHHHHHh
Confidence 222222222212222222 222222222222222222233333333 334578888888888877888888887665443
Q ss_pred cc-------------CCchhHHHHHHHHHHHHHHHHHHhccC
Q 012902 421 QH-------------GSWDDVFKVSVGLYLVGTAVWNLFSTG 449 (454)
Q Consensus 421 ~~-------------~g~~~~~~~~~~~~~~~~~~~~~~~~~ 449 (454)
.. .-|..+-|+++.+.++..+....+.+|
T Consensus 190 ~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~i~~~f~E 231 (488)
T KOG2325|consen 190 PLGEKGFMILPGLIFNMYTAPAWLMAILWIIYIVIILFFFKE 231 (488)
T ss_pred hhcCCceEEcCcceEEecchHHHHHHHHHHHHHHHHHhheee
Confidence 22 236677888888888777766665544
No 271
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=97.69 E-value=0.00089 Score=64.41 Aligned_cols=156 Identities=19% Similarity=0.174 Sum_probs=93.3
Q ss_pred HHHHHHHHhCCcccchhhHhHHHHHHHHHHHHHHHHHhhhhh---hcCccchhhHHHHHHHHHHHHH--HHHHHhhc-cC
Q 012902 286 MPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLV---SKGLSVTTVRKIMQSIGFLGPA--FFLTQLSH-VD 359 (454)
Q Consensus 286 ~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~---~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-~~ 359 (454)
...++++.+|.++.+...+.....+...+ .++.|.++|-+. .|| +..++..+.+... ..+..... ..
T Consensus 12 ~~~~l~~~l~ls~~~~~~~~~~~~lPw~~-Kp~~g~lsD~~pi~G~rr------~~Y~~i~~~~~~~~~~~~~~~~~~~~ 84 (433)
T PF03092_consen 12 IYPFLKDDLGLSPAQLQRLSSLASLPWSI-KPLYGLLSDSFPIFGYRR------KPYMIIGWLLGAVSALVLALLPASES 84 (433)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHhCchHH-hhhHHhhcccccccCCcc------hHHHHHHHHHHHHHHHHHHhcccccc
Confidence 34577888999999988877776665544 578899999985 332 1122222222211 11111111 12
Q ss_pred hhHHHHHHHHHHHhhhhhhcchhhhhhcc---cccccchhHHHHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHH
Q 012902 360 SPAMAVLCMACSQGTDAFSQSGLYSNHQD---IAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLY 436 (454)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~ 436 (454)
+......++++...+....-........| -.|+.+|...+.....+.+|+.++..+.|.+.+..+++..|.+.+.+.
T Consensus 85 s~~~~~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~~~~~f~i~~~~~ 164 (433)
T PF03092_consen 85 SAAIAVVLLFLASFGYAFADVAADALVVELARREPESRGDLQSFVWGVRSVGSLVGSLLSGPLLDSFGPQGVFLISAALP 164 (433)
T ss_pred hhhhHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhcCCCeEEehHHHHHH
Confidence 22222222222222222222222222222 223348899999999999999999999999999999999998888777
Q ss_pred HHHHHHHHHhcc
Q 012902 437 LVGTAVWNLFST 448 (454)
Q Consensus 437 ~~~~~~~~~~~~ 448 (454)
.+..+..+++.+
T Consensus 165 ~l~~~~~~~~~~ 176 (433)
T PF03092_consen 165 LLMLIVALFLLE 176 (433)
T ss_pred HHHHHHHHHhhh
Confidence 776655555444
No 272
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=97.60 E-value=0.00074 Score=59.23 Aligned_cols=138 Identities=16% Similarity=0.134 Sum_probs=98.9
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhhccccchHHHHHHHHHHHHHHhhhhhcccccHHHHHHHHHHHHhhcccchhhhhHHHh
Q 012902 83 VGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILS 162 (454)
Q Consensus 83 ~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~ 162 (454)
.|.+.-.-.+...+..+.+....||+.--.=..+..++.+.+..+.++++ +.++-+.+-.+..++.|.....-.++-+
T Consensus 64 tg~VLLaDilPsL~iKl~~Pff~~rfpf~~Ri~~~v~~sa~s~~lVafs~--s~~~sL~GV~~aSissGlGEiTFL~lss 141 (409)
T KOG3880|consen 64 TGAVLLADILPSLAIKLTAPFFIHRFPFGFRIALVVLLSALSFFLVAFSN--SVPMSLLGVVFASISSGLGEITFLALSS 141 (409)
T ss_pred cchhhhhhhhHHHHHHHhchhhhhhcccchHHHHHHHHHhcceEEEEecc--chhHHHhhhhhhhhcCCcceeehhhhhc
Confidence 45555555666677777777888887654445556778888999999999 9999999999999998877666555433
Q ss_pred hhcCccchHHHHHHHHhhHHHHHHhHHhHHHHHhh--ccCcchhHHHHhHHHHHHHHHHHHhcCCCC
Q 012902 163 KWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIH--RFGWPSVFYSFGSLGTVWFTVWLSKAHSSP 227 (454)
Q Consensus 163 ~~~~~~~rg~~~~~~~~~~~~g~~ig~~l~~~l~~--~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~ 227 (454)
. +| ....+.++.+.+.++.+|..--..+.+ .++-|.+.++...+.++.+...++.+++++
T Consensus 142 ~-Y~----~~~i~~WSSGTGgAGliGa~SYa~lT~~~~~spk~Tlli~l~lP~lfa~~yf~lL~~pe 203 (409)
T KOG3880|consen 142 R-YP----SIVIAGWSSGTGGAGLIGASSYAFLTSWANLSPKSTLLIMLFLPALFAFAYFFLLKSPE 203 (409)
T ss_pred c-CC----CceeccccCCCCcchhhhhhHHHHHhhhcCCChhhHHHHHHHHHHHHHHHHHheeCCCc
Confidence 3 32 234566777777777888766666666 356788888888888777676666665544
No 273
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=97.54 E-value=0.0019 Score=60.08 Aligned_cols=153 Identities=9% Similarity=0.073 Sum_probs=84.5
Q ss_pred cchHHHHHHHHHHHHHHH-HHHhh--HHHHHHHHhCCcccchhhHhHHHHHHHHHHHHHHHHHhhhhhhcCccchhhHHH
Q 012902 263 PPVWALIVSHFCHNWGTF-ILLTW--MPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKI 339 (454)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~-~~~~~--~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~ 339 (454)
|+-|..++...+..+.+. ....| ...+.++.+| +...+-+...++.+..++-.+.+-|+.||+|-|...
T Consensus 41 ~rRW~vLl~~slL~~SN~~qWI~ya~i~n~~~~~Yg-s~~~~~wlsmIym~v~vp~gf~~mw~ldk~GLR~a~------- 112 (480)
T KOG2563|consen 41 PRRWVVLLAFSLLNFSNGMQWIQYAPINNYVNSFYG-SSSAADWLSMIYMVVSVPFGFAAMWILDKFGLRTAL------- 112 (480)
T ss_pred hhHhHHHHHHHHHHhcCcchheeehhHHHHHHHHhc-chHHHHHHHHHHHHHHHHHhhHHHHhhcccchHHHH-------
Confidence 344444444444444431 22222 3345666667 666677888888999999999999999999988322
Q ss_pred HHHHHHHHHHHHHHHhhcc----ChhH--H-HHHHHHHHHhhhhhhcchhhhhhcccccccchhHHHHHHHHHHHHHHHH
Q 012902 340 MQSIGFLGPAFFLTQLSHV----DSPA--M-AVLCMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFG 412 (454)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~----~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~ 412 (454)
.+....-+.+..+=..... +..+ . .....+.............-....=.+|++|+.+..+..+...+|.+++
T Consensus 113 llgt~ln~iGa~Ir~iss~p~v~~~f~~~l~~~Gq~iaa~Aq~Fim~lPskiA~~WF~~~qra~A~~~~v~~n~LGvavg 192 (480)
T KOG2563|consen 113 LLGTVLNGIGAWIRLISSLPFVPPLFRRPLTHTGQSIAAAAQPFILGLPSKIAAVWFPPDQRAIATVLGVMGNPLGVAVG 192 (480)
T ss_pred HHHHHHHHHHHHHhhhccCccccccchhhhhHHhHHHHHHhhhHhhccccHHHHhhCCcchhhhhhhHHHhcchHHHHHH
Confidence 1111111111111111111 1112 1 1111122221111111111222233567899999999999999999999
Q ss_pred HHHHHHHhccC
Q 012902 413 TAATGYILQHG 423 (454)
Q Consensus 413 ~~~~g~l~~~~ 423 (454)
-.+...+..+.
T Consensus 193 ~llppilV~~~ 203 (480)
T KOG2563|consen 193 FLLPPILVPSS 203 (480)
T ss_pred hhccceecCCC
Confidence 88888887664
No 274
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=97.44 E-value=0.012 Score=47.39 Aligned_cols=111 Identities=15% Similarity=0.042 Sum_probs=73.0
Q ss_pred hhHhHHHHHHHHHHHHHHHHHhhhhhhcCccchhhHHHHHHHHHHHHHHHHHHhhccChhHHHHHHHHHHHhhhhhhcch
Q 012902 302 GLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLCMACSQGTDAFSQSG 381 (454)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (454)
..-+++......++.++.+.+.+++|.| +.+.++.+............+.+.......+.+.+........
T Consensus 40 ~~slai~Y~~~~~s~l~~P~iv~~lg~K---------~sm~lg~~~y~~y~~~~~~~~~~~l~~~s~l~G~~~a~lW~aq 110 (156)
T PF05978_consen 40 YYSLAILYGSFAISCLFAPSIVNKLGPK---------WSMILGSLGYAIYIASFFYPNSYTLYPASALLGFGAALLWTAQ 110 (156)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHhhH---------HHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHhhhhHHhhHhh
Confidence 3445566677788888999999999988 4555555555555444444444445555556666555554444
Q ss_pred hhhhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHhc
Q 012902 382 LYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQ 421 (454)
Q Consensus 382 ~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~ 421 (454)
.....+...++.+++..|+...+.+.+..+|..+.-.+.+
T Consensus 111 g~ylt~~s~~~~~~~~~~ifw~i~~~s~i~G~~~~~~~~~ 150 (156)
T PF05978_consen 111 GTYLTSYSTEETIGRNTGIFWAIFQSSLIFGNLFLFFIFQ 150 (156)
T ss_pred hHHHHHcCCHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3344444445679999999999999888888877655544
No 275
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=97.33 E-value=0.0041 Score=58.05 Aligned_cols=118 Identities=16% Similarity=0.085 Sum_probs=85.7
Q ss_pred cCCChhhHHHHHHHHHHHHHHhhhhhhhhhccccchHHHHHHHHHHHHHHhh---hhhcccccHHHHHHHHHHHHhhccc
Q 012902 76 FNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATAL---TPVAAKLGLPFLLVVRVFMGIGEGV 152 (454)
Q Consensus 76 ~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~l---~~~~~~~~~~~l~~~r~l~G~~~g~ 152 (454)
+.-..++..+...+|.+|-.++.--...+ |+.+.+++.+-..+..+..++ .-+.+ +.|..++.-+..|+..|.
T Consensus 276 ~~~~r~~Y~~Y~~~YQ~GVFISRSS~~~~--rir~lwils~LQ~~nl~~~~l~s~~~fip--si~ivf~lif~eGLlGGa 351 (402)
T PF02487_consen 276 FFSPRDQYRWYQLLYQLGVFISRSSLPFF--RIRRLWILSLLQVINLVFLLLQSWYRFIP--SIWIVFVLIFYEGLLGGA 351 (402)
T ss_pred CCCHHHHHHHHHHHHHHHHhhhhcceeee--ehhhHHHHHHHHHHHHHHHHHHHHHHHhh--HHHHHHHHHHHHHHhhhH
Confidence 33345777888888888877765433221 343333332222233333222 33456 889999999999999999
Q ss_pred chhhhhHHHhhhcCccchHHHHHHHHhhHHHHHHhHHhHHHHHhh
Q 012902 153 AMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIH 197 (454)
Q Consensus 153 ~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~ig~~l~~~l~~ 197 (454)
.++.....+.|-.|+++|..++|....+-++|..++..++-.+.+
T Consensus 352 ~YVNtF~~I~~~~~~~~REFslg~vsvsds~GI~lAgll~l~le~ 396 (402)
T PF02487_consen 352 SYVNTFYRISEEVPPEDREFSLGAVSVSDSLGILLAGLLGLPLEP 396 (402)
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999988877654
No 276
>PRK03612 spermidine synthase; Provisional
Probab=97.28 E-value=0.025 Score=55.60 Aligned_cols=168 Identities=13% Similarity=0.052 Sum_probs=91.1
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHhCCcccchhhHhHHHHHHHHHHHHHHHHHhhhhhhcCccchhhHHHHHHHHHHH
Q 012902 268 LIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLG 347 (454)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~ 347 (454)
+.+..++..++.........-.+...+|.+....+.+.+.+..+..+|+.+++++.++..++. ...-+.++++.
T Consensus 19 l~~~~f~sg~~~L~yEv~~~r~l~~~~G~s~~~~~~ii~~fl~glalGs~l~~~~~~~~~~~~------~~~e~~i~l~~ 92 (521)
T PRK03612 19 LLAAVFVCAACGLVYELLLGTLASYLLGDSVTQFSTVIGLMLFAMGVGALLSKYLLRDAAAGF------VAVELLLALLG 92 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHH------HHHHHHHHHHH
Confidence 344445556666666666666677778888888889999988888888888887764333221 01111111111
Q ss_pred HHH---HHHHhhccChh-HHHHHHHHHHHhhhhhhcchhhhhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHhc-c
Q 012902 348 PAF---FLTQLSHVDSP-AMAVLCMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQ-H 422 (454)
Q Consensus 348 ~~~---~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~-~ 422 (454)
... ........... .......+......+...|...-.......++.+...|-......+|+.+|+.+.+.+.= .
T Consensus 93 ~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~l~G~~~Pl~~~~~~~~~~~~~g~~~g~ly~~ntlGa~~G~l~~~~vLlp~ 172 (521)
T PRK03612 93 GLSALILYAAFAFQGLSRLLLYVLVLLIGLLIGMEIPLLMRILQRIRDQHLGHNVATVLAADYLGALVGGLAFPFLLLPR 172 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhhhhhhhHhHHhHHHHHHHHHHHHHHHHh
Confidence 111 11111110011 111111111222223334444444333333346677888899999999999999997764 5
Q ss_pred CCchhHHHHHHHHHHHHHH
Q 012902 423 GSWDDVFKVSVGLYLVGTA 441 (454)
Q Consensus 423 ~g~~~~~~~~~~~~~~~~~ 441 (454)
.|......+.+.+.+++.+
T Consensus 173 lG~~~t~~~~a~l~~~~a~ 191 (521)
T PRK03612 173 LGLIRTAALTGSLNLLAAL 191 (521)
T ss_pred cchHHHHHHHHHHHHHHHH
Confidence 7766555555555444443
No 277
>PRK03612 spermidine synthase; Provisional
Probab=97.23 E-value=0.0095 Score=58.53 Aligned_cols=143 Identities=16% Similarity=0.203 Sum_probs=88.5
Q ss_pred hhhhcCCChhhHHHHHHHHHHHHHHhhhhhhhhhccccchHHHHHHHHH--H-HHHHhhh----hhcccccHHHHHHHHH
Q 012902 72 MSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVW--W-SIATALT----PVAAKLGLPFLLVVRV 144 (454)
Q Consensus 72 i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~--~-~~~~~l~----~~~~~~~~~~l~~~r~ 144 (454)
+..-+|-+..+.+.+.+++..+.++|+.+.+++.++--++.. ..-+.+ . .++..+. ++... ....++..-+
T Consensus 41 l~~~~G~s~~~~~~ii~~fl~glalGs~l~~~~~~~~~~~~~-~~e~~i~l~~~~~~~ll~~~~~~~~~-~~~~~~~~~~ 118 (521)
T PRK03612 41 ASYLLGDSVTQFSTVIGLMLFAMGVGALLSKYLLRDAAAGFV-AVELLLALLGGLSALILYAAFAFQGL-SRLLLYVLVL 118 (521)
T ss_pred HHHHhCchHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHH
Confidence 344568888889999999999999999999988744333322 111111 1 1111111 11110 1122344456
Q ss_pred HHHhhcccchhhhhHHHhhhcCccchHHHHHHHHhhHHHHHHhHHhHHHHHh-hccCcchhHHHHhHHHHHHHH
Q 012902 145 FMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLI-HRFGWPSVFYSFGSLGTVWFT 217 (454)
Q Consensus 145 l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~ig~~l~~~l~-~~~gwr~~f~~~~~~~~~~~~ 217 (454)
+.++..|+..|....+..+.. .++-++..|-......+|.++|.++.+++. +.+|-....++.+.+.++..+
T Consensus 119 ~~~~l~G~~~Pl~~~~~~~~~-~~~~g~~~g~ly~~ntlGa~~G~l~~~~vLlp~lG~~~t~~~~a~l~~~~a~ 191 (521)
T PRK03612 119 LIGLLIGMEIPLLMRILQRIR-DQHLGHNVATVLAADYLGALVGGLAFPFLLLPRLGLIRTAALTGSLNLLAAL 191 (521)
T ss_pred HHHHHHHHHHHHHHHHHHhcc-ccchhhhhhhhHhHHhHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHH
Confidence 678888888887777665543 234577889999999999999999887654 467755555555555444433
No 278
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=97.20 E-value=0.076 Score=50.61 Aligned_cols=178 Identities=13% Similarity=0.140 Sum_probs=109.2
Q ss_pred chHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCcccchhhHhHHHHHHHHHHHHHHHHHhhhhhhcCccchhhHHHHHHH
Q 012902 264 PVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSI 343 (454)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~ 343 (454)
..+.+....++..+..-.+.+-.|.++.+.+.-+-.-.+.....-.+..++.+...|.+.||..|.+...... ..--.
T Consensus 3 ~~~~Ly~sh~ls~w~dR~w~Fa~~L~L~~i~p~sLl~~siygl~~~~~~~~f~~~vG~~iD~~~Rl~~~~~~l--~~Qn~ 80 (432)
T PF06963_consen 3 ALWRLYLSHFLSTWGDRMWEFAVPLFLISIFPGSLLPVSIYGLVRSLSAILFGPWVGRWIDRSPRLKVIRTSL--VVQNL 80 (432)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHhhHHHHHHHhCCcchhhHHHHH--HHHHH
Confidence 4556778888888888889999999999986656555666666667777888888999999999887655432 11112
Q ss_pred HHHHHHHHHH--HhhccC---hhHHHHHHHHH---HHhhh-hhhcchhhhhhcc-------cccccchhHHHHHHHHHHH
Q 012902 344 GFLGPAFFLT--QLSHVD---SPAMAVLCMAC---SQGTD-AFSQSGLYSNHQD-------IAPRYSGVLLGLSNTAGVL 407 (454)
Q Consensus 344 ~~~~~~~~~~--~~~~~~---~~~~~~~~~~~---~~~~~-~~~~~~~~~~~~~-------~~~~~~~~~~g~~~~~~~~ 407 (454)
++...+..+. ...... +.+....++.. ..... ............| -+++...+.++...-+-..
T Consensus 81 sv~~s~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~i~~Las~~~~iavERDWVvvi~~~~~~~La~~NA~mRRIDL~ 160 (432)
T PF06963_consen 81 SVAASCALFLLLLSYPSSSSQSSWLFIALFALLILLGAIERLASIANTIAVERDWVVVIAGGDPGALARMNATMRRIDLF 160 (432)
T ss_pred HHHHHHHHHHHHHhCCccccccchHHHHHHHHHHHHHHHHHHHHhhhhheeccchhhhhcCCChhhHHHHHHHHHHHHHH
Confidence 2222222221 111111 11222121111 11111 1111112222222 1344567777777777778
Q ss_pred HHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHH
Q 012902 408 AGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVW 443 (454)
Q Consensus 408 g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~ 443 (454)
...++|.+.|.+.+..++.....+.++..+++..+=
T Consensus 161 ckllaPl~vG~l~t~~s~~~~~~~i~~~N~~S~~vE 196 (432)
T PF06963_consen 161 CKLLAPLFVGLLMTFASPVIAAIFIAGWNLASVFVE 196 (432)
T ss_pred HHHHHHHHHHHHhhccCHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999888888888887776543
No 279
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=97.12 E-value=0.027 Score=52.78 Aligned_cols=161 Identities=9% Similarity=-0.013 Sum_probs=98.3
Q ss_pred HHHhhHHHHHHHH-hCCcccchhhHhHHHHH-HHHHHHHHHHHHhhhhhhcCccchhhHHHHHHHHHHH-HHHHHHHhhc
Q 012902 281 ILLTWMPTYYNQV-LHFNLTESGLFCVLPWL-TMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLG-PAFFLTQLSH 357 (454)
Q Consensus 281 ~~~~~~~~~l~~~-~g~s~~~~~~~~~~~~~-~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 357 (454)
-...++..|+.+. .|++.++...-..+... .....-+....+.|.++.|. ++.+..+. .....+....
T Consensus 21 PsEPfl~~yL~~~~kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l~Ykp---------viil~~~~~i~t~~lll~~ 91 (412)
T PF01770_consen 21 PSEPFLTPYLTGPDKNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYLRYKP---------VIILQALSYIITWLLLLFG 91 (412)
T ss_pred CCCccchHHHcCCccCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhhH---------HHHHHHHHHHHHHHHHHHH
Confidence 3467888899886 79998888654444443 44555567788999999883 22222222 2222222222
Q ss_pred cChhHHHHHHHHHHHhhhhhhcchhhhhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHhcc--CCchhHHHHHHHH
Q 012902 358 VDSPAMAVLCMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQH--GSWDDVFKVSVGL 435 (454)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~--~g~~~~~~~~~~~ 435 (454)
.+....-+.-+..+.... .-..-...+-..+++++--++.+......-+|.+++..++-.+... .+|.....+....
T Consensus 92 ~sv~~mq~~q~~yg~~~a-~evay~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs~~~~sy~~L~~isl~~ 170 (412)
T PF01770_consen 92 TSVLAMQLMQFFYGLATA-AEVAYYSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVSFGGVSYFQLNYISLAS 170 (412)
T ss_pred CcHHHHHHHHHHHHHHHH-HHHHHHHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHH
Confidence 232222233333333222 2222222333566788888888998888888988888888877764 6677777777777
Q ss_pred HHHHHHHHHHhccCCc
Q 012902 436 YLVGTAVWNLFSTGEK 451 (454)
Q Consensus 436 ~~~~~~~~~~~~~~~~ 451 (454)
..++.+..+++++.++
T Consensus 171 ~~~a~~~~~fLP~~~~ 186 (412)
T PF01770_consen 171 VSLALLIALFLPMPKR 186 (412)
T ss_pred HHHHHHHHHHcCCCCc
Confidence 7777777677665443
No 280
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=96.84 E-value=0.34 Score=43.59 Aligned_cols=100 Identities=10% Similarity=0.127 Sum_probs=65.5
Q ss_pred HHHHHhhhhhhhhhccccchHHHHHHHHHHHHHHhhhhhcccccHHHHHHHHHHHHhhcccchhhhhHHHhhhcCc--cc
Q 012902 92 WGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPV--AE 169 (454)
Q Consensus 92 ~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~--~~ 169 (454)
+..+...++.+.+..++|-|+++.++...+...-..- +-+ .+..++-.....|++.+..+..--+|+++.-.. +.
T Consensus 69 ~~l~~s~m~~~~~Ir~~g~K~tm~lav~~Y~lyiA~N-l~p--r~~tlVPa~~~~G~aa~p~W~SkgtYlT~~g~~ya~~ 145 (390)
T KOG3097|consen 69 LSLIDSSMFMPLLIRFLGTKWTMVLAVFPYALYIAAN-LEP--RYETLVPAGLVLGMAAGPIWASKGTYLTPMGQNYANQ 145 (390)
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhh-cch--hHHhhccHHHhhccccccccccCcceecHHHHHHHHh
Confidence 3344445555588999999999998887776543322 334 678899999999999999888776776655422 23
Q ss_pred h-------------HHHHHHHHhhHHHHHHhHHhHHHH
Q 012902 170 R-------------SRSLALVYSGMYLGSVTGLAFSPF 194 (454)
Q Consensus 170 r-------------g~~~~~~~~~~~~g~~ig~~l~~~ 194 (454)
| |....+++...-+|..+...+-..
T Consensus 146 ~~~q~~~~~~~~ffg~Ffii~~~~qv~gn~issli~~~ 183 (390)
T KOG3097|consen 146 RGEQAGDGMKVRFFGEFFIIFQCAQVWGNLISSLIMTL 183 (390)
T ss_pred hhhhccCceeeeehhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3 234445555555565555544433
No 281
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=96.66 E-value=0.16 Score=45.91 Aligned_cols=151 Identities=18% Similarity=0.166 Sum_probs=85.3
Q ss_pred HHHHHHHhhHHHHHHHHhCCcc--cchhhHhHHHHHHHHHHHHHHHHHhhhhhhcCccchhhHHHHHHHHHHHHHHHHHH
Q 012902 277 WGTFILLTWMPTYYNQVLHFNL--TESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQ 354 (454)
Q Consensus 277 ~~~~~~~~~~~~~l~~~~g~s~--~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (454)
..........+.+..+ .+.+. ...+.......+...++.+..|.+.||.|||+.. ...............
T Consensus 16 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~-------~~~~~~~~~~~~~~~ 87 (338)
T COG0477 16 LDLGLLSPALPLLLST-LSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVL-------IIGLLLFLLGTLLLA 87 (338)
T ss_pred HhcchHHHHHHHHHHH-cCCCchhHHHHHHHHHHHHHHHHHhhhhhhccccccchHHH-------HHHHHHHHHHHHHHH
Confidence 3344444556666666 34444 4678888888899999999999999999888322 222211111111111
Q ss_pred hhccChhHHHHHHHH-HHHhhhhhhcchhhhhhccccc--ccchhHHHHHHH-HHHHHHHHHHHHHHHHhcc--CCchhH
Q 012902 355 LSHVDSPAMAVLCMA-CSQGTDAFSQSGLYSNHQDIAP--RYSGVLLGLSNT-AGVLAGVFGTAATGYILQH--GSWDDV 428 (454)
Q Consensus 355 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~g~~~~-~~~~g~~~~~~~~g~l~~~--~g~~~~ 428 (454)
............... .+.+.+ ...+.......+..| ++++...+.... ...++..++|.+.+.+.+. .+|+..
T Consensus 88 ~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (338)
T COG0477 88 LAPNVGLALLLILRLLQGLGGG-GLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGALLWGWRAA 166 (338)
T ss_pred hCccchHHHHHHHHHHHHhhhH-HHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHH
Confidence 111112222222222 233333 333444444444445 478888888888 5778888888777777654 566665
Q ss_pred HHHHHHHH
Q 012902 429 FKVSVGLY 436 (454)
Q Consensus 429 ~~~~~~~~ 436 (454)
+.......
T Consensus 167 ~~~~~~~~ 174 (338)
T COG0477 167 FLLAALLG 174 (338)
T ss_pred HHHHHHHH
Confidence 55444444
No 282
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.63 E-value=0.071 Score=50.90 Aligned_cols=137 Identities=14% Similarity=0.178 Sum_probs=91.8
Q ss_pred Hhhhchhhhhcchh---hhhhcCCChhh-HHHHHHHHHHHHHHhhhhhhhhh---ccccchHHHHHHHHHHHHHHhhhhh
Q 012902 58 IVFGQVNMSIAILP---MSAEFNWNPAT-VGLIQSSFFWGYLLTQIAGGIWA---DTVGGKAVLGFGVVWWSIATALTPV 130 (454)
Q Consensus 58 ~~~~~~~~~~~~~~---i~~~~~~s~~~-~g~~~s~~~~~~~~~~~~~g~l~---dr~Grr~~~~~~~~~~~~~~~l~~~ 130 (454)
.+.....+....|. ..+..+.+... .+.-.-...++..++..+.+.+. +++||++.+..+..+..++.++.-.
T Consensus 252 tG~~~Sf~~~iypt~i~ft~~~~~n~~~~~ai~~~~~g~g~v~~g~~~~~l~~rir~fg~~~~~~~~~~~~~~~~~li~l 331 (461)
T KOG3098|consen 252 TGLETSFWISIYPTCISFTRKLGSNTTYLIAIYSIGIGLGEVIGGLDFSILSKRIRGFGRKPTVLIGIIIHLIGFLLIHL 331 (461)
T ss_pred HHHHHHHHHhccchhhhhhhhccCcchhHHHHHHHHHhHHHHHHHHHHHHHhhhhhhcccCcchhHHHHHHHHHHHHHhc
Confidence 55555555555554 22223322222 22222334444445555566665 5689999999999888888777644
Q ss_pred ccc----------------ccHHHHHHHHHHHHhhcccchhhhhHHHhhhcCccchHHHHHHHHhhHHHHHHhHHhHHHH
Q 012902 131 AAK----------------LGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPF 194 (454)
Q Consensus 131 ~~~----------------~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~ig~~l~~~ 194 (454)
... .++...++.-++.|++-+......+.++++.. +++|..+.++...-..++..++......
T Consensus 332 ~~p~dap~~~t~~~~~~~~~~~~~~~ii~~l~G~~D~~~~t~~~~ii~~~~-~~~~~~~fsi~kfyq~~~s~v~~f~~~~ 410 (461)
T KOG3098|consen 332 SFPNDAPLRPTDSPPLLFTPSYYLALIIGFLLGFGDACFNTQRYVIIALLY-PDDRAQAFSLFKFYQSVASCVAFFFSPY 410 (461)
T ss_pred cccccCCCCCCcccccccccchhHHHHHHHHHhhHHHHHHHHHHHHHHHHh-cCchHHHHHHHHHHHHHHHHHHhhhhhh
Confidence 321 13556778889999999999999999999999 6889999999988888888877655544
Q ss_pred H
Q 012902 195 L 195 (454)
Q Consensus 195 l 195 (454)
.
T Consensus 411 ~ 411 (461)
T KOG3098|consen 411 L 411 (461)
T ss_pred h
Confidence 3
No 283
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=96.55 E-value=0.021 Score=40.24 Aligned_cols=53 Identities=15% Similarity=0.241 Sum_probs=45.5
Q ss_pred HHHHHHHHhhHHHHHHHHhCCcccchhhHhHHHHHHHHHHHHHHHHHhhhhhhc
Q 012902 276 NWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSK 329 (454)
Q Consensus 276 ~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~ 329 (454)
..+-+.+...+|...+| .++|..+.+++.+.+.++..+|.+...++.++.+++
T Consensus 5 GigRFayTplLP~M~~~-~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~ 57 (85)
T PF06779_consen 5 GIGRFAYTPLLPLMQAD-GGLSLSQAGWLASANYLGYLVGALLASRLPRHSRPR 57 (85)
T ss_pred hhHHHHHHhHhHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHH
Confidence 45667778888988877 699999999999999999999999999988875555
No 284
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=96.50 E-value=0.22 Score=48.20 Aligned_cols=151 Identities=15% Similarity=0.075 Sum_probs=80.5
Q ss_pred chHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCc-----ccchhhHhHHHHHHHHHH-HHHHHHHhhhhhhcCccchhhH
Q 012902 264 PVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFN-----LTESGLFCVLPWLTMAFS-ANLGGWIADTLVSKGLSVTTVR 337 (454)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s-----~~~~~~~~~~~~~~~~~~-~~~~g~l~dr~~~~~~~~~~~~ 337 (454)
++....+..++..+.++.. --++|....+ .+....+-....+...+. .++.+++++|++|++.......
T Consensus 8 k~~~~~l~fF~il~~Y~iL-----R~lKD~lvv~~~~~gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~~~~~lf~~~~~ 82 (472)
T TIGR00769 8 KFLPLFLMFFCILFNYTIL-----RDTKDTLVVTAKGSGAEIIPFLKTWVVVPMAVIFMLIYTKLSNILSKEALFYTVIS 82 (472)
T ss_pred HHHHHHHHHHHHHHHHHHH-----HhhhhheeecccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHhHHHHHH
Confidence 4444444545444443322 3346655552 244555555554544444 7789999999999976543211
Q ss_pred HHHHHHHHHHHHHHHHHhhcc--C----------------------hhHHHHHHHHHHHhhhhhhcc-hhhhhhcccc-c
Q 012902 338 KIMQSIGFLGPAFFLTQLSHV--D----------------------SPAMAVLCMACSQGTDAFSQS-GLYSNHQDIA-P 391 (454)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~--~----------------------~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~ 391 (454)
.. ...+...+..+...... + ..|....+....-..+....+ ......+|.. +
T Consensus 83 ~F--~~~f~lF~~vl~p~~~~~~p~~~~~~~~~~~~~~~~~~i~~~~~W~~~~FYv~~elw~~~vvS~lFW~fandi~t~ 160 (472)
T TIGR00769 83 PF--LGFFALFAFVIYPLSDLLHPTALADKLLSLLPPGFMGFIAILRIWSFALFYVMAELWGSVVLSLLFWGFANQITTI 160 (472)
T ss_pred HH--HHHHHHHHHHHhcchhhcCCcHHHHHHHhhcchhhHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCH
Confidence 11 11111111111100000 0 012222233333333333333 5555565555 4
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHHHhc
Q 012902 392 RYSGVLLGLSNTAGVLAGVFGTAATGYILQ 421 (454)
Q Consensus 392 ~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~ 421 (454)
++..+-.++.....++|..+++.+..++.+
T Consensus 161 ~qakRfy~l~~~ganlg~i~sg~~~~~~~~ 190 (472)
T TIGR00769 161 DEAKRFYALFGLGANVALIFSGRTIKYFSK 190 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 788899999999999999999999988773
No 285
>KOG4830 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=96.12 E-value=0.00089 Score=57.18 Aligned_cols=65 Identities=8% Similarity=0.144 Sum_probs=46.6
Q ss_pred CcchhHhhcCcchHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCcccchhhHhHHHHHHHHHHHH
Q 012902 253 TIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSAN 317 (454)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~ 317 (454)
+.+|..-+++-.+....+.+.+.-...+.-..++|.|..+..+++.....++-.+..+.....+.
T Consensus 191 Rm~W~~WF~~v~~YQiAllYmLsRL~iNiSQaYlaFfviddlqm~qsakAllP~v~Yl~SF~VS~ 255 (412)
T KOG4830|consen 191 RMHWTSWFGHVQFYQIALLYMLSRLYINISQAYLAFFVIDDLQMEQSAKALLPMVAYLSSFSVSM 255 (412)
T ss_pred cccchhhhhhhHHHHHHHHHHHHHHHhhhhhhheeeEEeehhhHHHHHhhhhHHHHHHhhhhHHh
Confidence 45666677888888888888888888888888999888887777766666655555555444333
No 286
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=94.96 E-value=0.0066 Score=55.58 Aligned_cols=113 Identities=10% Similarity=0.040 Sum_probs=1.3
Q ss_pred hHhHHHHHHHHHHHHHHHHHhhhh-hhcCccchhhHHHHHHHHHHHHHHHHHH----hhccChhHHHHH-HHHHHHhhhh
Q 012902 303 LFCVLPWLTMAFSANLGGWIADTL-VSKGLSVTTVRKIMQSIGFLGPAFFLTQ----LSHVDSPAMAVL-CMACSQGTDA 376 (454)
Q Consensus 303 ~~~~~~~~~~~~~~~~~g~l~dr~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~-~~~~~~~~~~ 376 (454)
..+..++++-.+|+.+.++..-+. .+|.+......+.+. +.+...+-.-.. ....++.++.++ ..+++...+-
T Consensus 186 ~~fl~Fn~gD~iGR~l~~~~~~~~~~~~~l~~~s~~R~~f-iPlf~~cn~~p~~~~~~~~~~~d~~~~i~~~l~g~TNGy 264 (309)
T PF01733_consen 186 VLFLLFNLGDFIGRFLASWPRWPGPSPRWLWILSLLRFLF-IPLFLLCNVQPRPRYLPVLFNSDAWFIILMLLFGFTNGY 264 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHhcchhcceeEecccccccHHHHHHHHHHH-HHHHHHHHhhcccccCCCcccchHHHHHHHHHHHHccch
Confidence 345678899999999887642221 233222211111111 111111100000 001122233333 3333333333
Q ss_pred hhcchhhhhhcccccccchhHHHHHHHHHHHHHHHHHHHH
Q 012902 377 FSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAAT 416 (454)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~ 416 (454)
..........+.++|++|..+-.+....-..|-.+|..+.
T Consensus 265 l~tl~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs~ls 304 (309)
T PF01733_consen 265 LSTLAMMYAPKSVSPEERELAGSVMSFFLSFGLFIGSVLS 304 (309)
T ss_dssp --HHHH----------------------------------
T ss_pred hhhceeeeCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333333334556677777777776666667766666543
No 287
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=94.87 E-value=0.58 Score=45.05 Aligned_cols=111 Identities=14% Similarity=0.051 Sum_probs=77.5
Q ss_pred hHHHHHHHHHHHHHHhhhhhhhhhccccch--HHHHHHH--HHHHHHHhhhhhc---------ccccHHHHHHHHHHHHh
Q 012902 82 TVGLIQSSFFWGYLLTQIAGGIWADTVGGK--AVLGFGV--VWWSIATALTPVA---------AKLGLPFLLVVRVFMGI 148 (454)
Q Consensus 82 ~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr--~~~~~~~--~~~~~~~~l~~~~---------~~~~~~~l~~~r~l~G~ 148 (454)
..-....+++++-.+|..+..+. ..-++| ++..... +++.--.++|..- + +-+..++.-++.|+
T Consensus 308 ~~~i~~~~fNvgD~vGR~~~~~~-~~p~~~~~~l~i~s~~R~iFIPlf~lcn~~~~~~~p~~~~--~d~~~~~~~~l~gl 384 (437)
T TIGR00939 308 YPIICFLLFNLFDWLGRSLTSKF-MWPDEDSRWLPILSFLRVLFIPLFLLCNYPQRSRLPVFFP--GDAYFIILMLLFGF 384 (437)
T ss_pred HHHHHHHHHHHHHHHHhhhhhee-EeeCCCccchHHHHHHHHHHHHHHHHhcCCccccCCeeec--ccHHHHHHHHHHHH
Confidence 33456678888888888866443 111222 3332222 2333333444322 3 55777788999999
Q ss_pred hcccchhhhhHHHhhhcCccchHHHHHHHHhhHHHHHHhHHhHHHHH
Q 012902 149 GEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFL 195 (454)
Q Consensus 149 ~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~ig~~l~~~l 195 (454)
..|-....++.+..+..++++|..+-.+...+..+|..+|..++-.+
T Consensus 385 tnGy~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l~~~~ 431 (437)
T TIGR00939 385 SNGYLGSLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAVLSFLF 431 (437)
T ss_pred hhhHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999998775544
No 288
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=94.73 E-value=0.7 Score=46.77 Aligned_cols=168 Identities=14% Similarity=0.047 Sum_probs=104.3
Q ss_pred HHHhhHHHHHHHHhCCcccchhhHhHHHHHHHHHHHHHHHHHhhhhhhcCccchhhHHHHHHHHHHHHHHHHHHhh----
Q 012902 281 ILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLS---- 356 (454)
Q Consensus 281 ~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 356 (454)
++..-.-.-++++++++..+.|++...+-++..+......+...|..|.|.+-.+. .++.++.++..+--....
T Consensus 114 ~y~~s~IttiErRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~HrPr~Ig~G~--~~m~lgsll~alPHf~~~~y~~ 191 (735)
T KOG3626|consen 114 GYFNSVITTIERRFKISSSQSGLIASSYDIGNLLLIIFVSYFGSRGHRPRWIGIGL--VLMGLGSLLFALPHFFSGPYEY 191 (735)
T ss_pred hhhhhhhhhhhhhcCCCCCcceeEeeecccchhhhhHhHHHhccccCccceeeech--hHHHHHHHHHhChHHhcCcchh
Confidence 44444445677789999999999999999999999888888888887776655443 333333333222111100
Q ss_pred -----------c---------------------------cCh--hH-HHHHHHHHHHhhhhhhcchhhhhhccccc-ccc
Q 012902 357 -----------H---------------------------VDS--PA-MAVLCMACSQGTDAFSQSGLYSNHQDIAP-RYS 394 (454)
Q Consensus 357 -----------~---------------------------~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 394 (454)
. ..+ .+ .++...++.+.+.....+.-..+.+|... ++.
T Consensus 192 ~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~tlGisYiDDnvk~~~S 271 (735)
T KOG3626|consen 192 ELEVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPIFTLGISYIDDNVKKKNS 271 (735)
T ss_pred hhhhhhccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCCccCCCccccccccccCC
Confidence 0 000 11 11122222222223334444455555444 678
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhcc-------------------CCchhHHHHHHHHHHHHHHHHHHhccCC
Q 012902 395 GVLLGLSNTAGVLAGVFGTAATGYILQH-------------------GSWDDVFKVSVGLYLVGTAVWNLFSTGE 450 (454)
Q Consensus 395 ~~~~g~~~~~~~~g~~~~~~~~g~l~~~-------------------~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 450 (454)
+...|+..++.-+|=++|=.+++.+.+. +-|...|++.+.+.++..+.++++.++.
T Consensus 272 plYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~~~~~~a~p~f~fPk~l 346 (735)
T KOG3626|consen 272 PLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGALLLFSAVPLFFFPKEL 346 (735)
T ss_pred cHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHhCcccC
Confidence 8999999999988888888888877643 1255567777788877777777766543
No 289
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=94.38 E-value=0.1 Score=49.13 Aligned_cols=152 Identities=9% Similarity=0.007 Sum_probs=89.2
Q ss_pred chHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCcccchhhHhHHHHHHHHHHHHHHHHHhhh----hhhcCccchhhHHH
Q 012902 264 PVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADT----LVSKGLSVTTVRKI 339 (454)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr----~~~~~~~~~~~~~~ 339 (454)
.........+...+++..=.++.|+|+++ .|.+.+..+.+....-+.+.+.+++.|..+|| +||||...... ..
T Consensus 33 ~li~v~~ia~Gvqf~wA~elsy~tPyl~~-lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~-s~ 110 (498)
T KOG0637|consen 33 KLISVASIAAGVQFGWALELSYLTPYLQS-LGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAG-SL 110 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHhccccHHHHH-cCCCcccccccccccccccceecccccccccccccccccccchHHHh-hH
Confidence 44455555666667777778999999999 69999999998888889999999999999996 67887654321 11
Q ss_pred HHHHHHHHHHH--HHHHhhccChh----HHHHHHHHHHHh-----hhhhhcchhhhhhcccccccchh-HHHHHHHHHHH
Q 012902 340 MQSIGFLGPAF--FLTQLSHVDSP----AMAVLCMACSQG-----TDAFSQSGLYSNHQDIAPRYSGV-LLGLSNTAGVL 407 (454)
Q Consensus 340 ~~~~~~~~~~~--~~~~~~~~~~~----~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~ 407 (454)
.+.+++..... -+.....++.. ...+...++++. ......|.-....+...++++.+ +++....+..+
T Consensus 111 ~i~~~l~Lig~aaDig~~lgd~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans~f~~f~av 190 (498)
T KOG0637|consen 111 LIAVSLFLIGYAADIGLLLGDNERKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTRANSVFSFFMAV 190 (498)
T ss_pred HHHHHHhhhhhHhhhhHHhcCCcccccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccchhHHHHHHh
Confidence 11111111100 00001111111 122233333322 22233333333444444555555 88888888888
Q ss_pred HHHHHHHHHH
Q 012902 408 AGVFGTAATG 417 (454)
Q Consensus 408 g~~~~~~~~g 417 (454)
|+.+|=.+.+
T Consensus 191 GnvLGY~~g~ 200 (498)
T KOG0637|consen 191 GNVLGYALGS 200 (498)
T ss_pred cceeeeeccc
Confidence 8887766555
No 290
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=94.34 E-value=2.8 Score=39.37 Aligned_cols=179 Identities=13% Similarity=0.036 Sum_probs=83.0
Q ss_pred CcchHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCcccchhhHhHHHHHHHHHHHHHHHHHhhhhhhcCccchhhHHHHH
Q 012902 262 KPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQ 341 (454)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~ 341 (454)
+-.++..++...-....++.+.+-.+.|.++..+.++ +-.....+.+.+.+...+...+--|...|.....+. .+.
T Consensus 17 ~~v~~i~~llGiG~LlpWN~fiTa~~y~~~~~~~~~~--~~~F~~~~~~~a~i~~ll~~~~n~~~~~~~~~~~~~--~l~ 92 (406)
T KOG1479|consen 17 NLVYLIFLLLGIGTLLPWNMFITASDYYYYRFPGYHN--SKNFTSSYTLAAQIPLLLFNLLNAFLNTRLRTRVGY--LLS 92 (406)
T ss_pred ccHHHHHHHHhcccccchHhhhccHHHHHhhcCCCch--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHH
Confidence 3345555566666666777777777777666545444 444444444444444444444333333331111111 111
Q ss_pred HHHHHHHHHHHHHh--hccC---hhHHHHHHHHHHHhhhhhhcchhhhhhcccccccchhHHHHHHHHHHHHHHHHHHHH
Q 012902 342 SIGFLGPAFFLTQL--SHVD---SPAMAVLCMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTAAT 416 (454)
Q Consensus 342 ~~~~~~~~~~~~~~--~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~ 416 (454)
....+......... ...+ ..+..........+..+.............|+|.....++-.+.++.+.+. ...+.
T Consensus 93 ~~~il~i~~l~~~~v~~~~~~~~ff~vt~~~vv~~~~a~a~~qgs~~G~a~~~P~~ytqavm~G~a~aG~l~Sl-~~i~t 171 (406)
T KOG1479|consen 93 LIAILFIVTLDLALVKTDTWTNGFFLVTLIIVVLLNLANAVVQGSLYGLAGLFPSEYTQAVMSGQALAGTLTSL-LRILT 171 (406)
T ss_pred HHHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHhhhhhhhccchhhhhhcCCHHHHHHHHhcchhHhHHHHH-HHHHH
Confidence 11111111111111 1111 122233334444455566667777778888888654444333333333222 22333
Q ss_pred HHHhcc--CCchhHHHHHHHHHHHHHHHHHH
Q 012902 417 GYILQH--GSWDDVFKVSVGLYLVGTAVWNL 445 (454)
Q Consensus 417 g~l~~~--~g~~~~~~~~~~~~~~~~~~~~~ 445 (454)
-...+. .+-..-|.+..++.+++.+.+..
T Consensus 172 ka~~~~~~~sA~~yF~~s~~~~llC~i~y~~ 202 (406)
T KOG1479|consen 172 KAAFSDSRTSALIYFITSTVILLLCFVLYLV 202 (406)
T ss_pred HHhcCCCCceeehhHHHHHHHHHHHHHHHHH
Confidence 333332 33444555666666666666653
No 291
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=94.26 E-value=0.3 Score=46.18 Aligned_cols=86 Identities=12% Similarity=0.012 Sum_probs=61.2
Q ss_pred HHHHHHHHHHHhhhhhhcchhhhhhccccc---ccchhHHHHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHH
Q 012902 362 AMAVLCMACSQGTDAFSQSGLYSNHQDIAP---RYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLV 438 (454)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~ 438 (454)
...+.+.++..|.++.=+.......+..++ +++.+....+....++|..+++.+.+++.++.||...|.+.++..++
T Consensus 35 ~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~in~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~ 114 (372)
T PF00854_consen 35 LFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGINIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLL 114 (372)
T ss_dssp HHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHHhhhhHhhcccchhhccccchhhhhhHHHHHHHH
Confidence 344444455555444443333333344433 35778888899999999999999999999999999999999999998
Q ss_pred HHHHHHHhc
Q 012902 439 GTAVWNLFS 447 (454)
Q Consensus 439 ~~~~~~~~~ 447 (454)
+.+.++.-+
T Consensus 115 ~~~~f~~~~ 123 (372)
T PF00854_consen 115 ALIVFLSGR 123 (372)
T ss_dssp HHHHHHCCC
T ss_pred HHHHHHhCC
Confidence 887766543
No 292
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=93.71 E-value=0.015 Score=57.54 Aligned_cols=176 Identities=10% Similarity=0.004 Sum_probs=0.7
Q ss_pred HHHHHHHHHHHHHHhhHHHHHHHHhCCcccchhhHhHHHHHHHHHHHHHHHHHhhhhhhcCccchhhHHHHHHHHHHHHH
Q 012902 270 VSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPA 349 (454)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~ 349 (454)
+..+.+ ....++..-.-.-++++++++..++|++.+.+-++..+..++..++.+|..|-|.+-.+ .+++.++.++.+
T Consensus 10 ~~~~~q-~~~~g~~~~~lttiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~hrprwig~g--~~~~~~g~~l~~ 86 (539)
T PF03137_consen 10 LLGLFQ-MMVSGYVNSSLTTIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRGHRPRWIGIG--ALLMGLGSLLFA 86 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHH-HHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcceeeec--HHHHHHHHHHHh
Confidence 333444 33444443334456777999999999999999999999999999888876544332222 233333333322
Q ss_pred HHHHHhhcc---------------------------------------ChhHHHHHHHHH----HHhhhhhhcchhhhhh
Q 012902 350 FFLTQLSHV---------------------------------------DSPAMAVLCMAC----SQGTDAFSQSGLYSNH 386 (454)
Q Consensus 350 ~~~~~~~~~---------------------------------------~~~~~~~~~~~~----~~~~~~~~~~~~~~~~ 386 (454)
+--+..... .........+++ .+.+.....+.-.++.
T Consensus 87 lPhf~~~~y~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYi 166 (539)
T PF03137_consen 87 LPHFLSGPYSYEEASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYI 166 (539)
T ss_dssp -----------------------------------------------------------------SSS------------
T ss_pred ccHhhcCCCccccccccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeee
Confidence 211111000 000001111222 2222222333334444
Q ss_pred -cccccccchhHHHHHHHHHHHHHHHHHHHHHHHhcc----------------------CCchhHHHHHHHHHHHHHHHH
Q 012902 387 -QDIAPRYSGVLLGLSNTAGVLAGVFGTAATGYILQH----------------------GSWDDVFKVSVGLYLVGTAVW 443 (454)
Q Consensus 387 -~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~----------------------~g~~~~~~~~~~~~~~~~~~~ 443 (454)
+.+++++.+...|+...+..+|-++|=.+++...+. +.|...|.+.+.+.++..+.+
T Consensus 167 DDnv~~~~splYiGi~~~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~g~~~~l~aipl 246 (539)
T PF03137_consen 167 DDNVSKKNSPLYIGILYAMSILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFLICGILLFLSAIPL 246 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccccccCccchhhhhHHhhccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445667888999999988888888887777766642 124445666666666666655
Q ss_pred HHhcc
Q 012902 444 NLFST 448 (454)
Q Consensus 444 ~~~~~ 448 (454)
+.+.|
T Consensus 247 ~~FPk 251 (539)
T PF03137_consen 247 FFFPK 251 (539)
T ss_dssp -----
T ss_pred HcCCc
Confidence 55543
No 293
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=93.31 E-value=1.3 Score=40.99 Aligned_cols=183 Identities=10% Similarity=0.020 Sum_probs=90.3
Q ss_pred CcchHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCcccchhhHhHHHHHHHHHHHHHHHHHhh-----hhhhcCccchhh
Q 012902 262 KPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIAD-----TLVSKGLSVTTV 336 (454)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d-----r~~~~~~~~~~~ 336 (454)
.+++..+...+..+........ -+|..++. .|.|-++.+.....+.-.. --++...+.| |+||||.-....
T Consensus 30 ~~~illLl~LYllQGiP~GL~~-~iP~lL~a-k~vSyt~~a~fS~ay~P~s--LKllWaPiVDs~y~k~~GrrksWvvp~ 105 (510)
T KOG3574|consen 30 RSSILLLLFLYLLQGIPLGLIG-AIPLLLQA-KGVSYTSQAIFSFAYWPFS--LKLLWAPIVDSVYSKRFGRRKSWVVPC 105 (510)
T ss_pred hhhHHHHHHHHHHcCCchhHhh-hhHHHhcC-CCcchhhhhhhhhhhhHHH--HHHHHHhhhHHHHHHhhccccceeeeh
Confidence 3567777777777777776655 88988885 4777666665544332221 2345666777 999997543221
Q ss_pred HHHHHHHHHHHHHHHHHHh---h-ccChhHHHHH--HHHHHHhhhhhhcchhhhhh-cccccccchhHHHHHHHHHHHHH
Q 012902 337 RKIMQSIGFLGPAFFLTQL---S-HVDSPAMAVL--CMACSQGTDAFSQSGLYSNH-QDIAPRYSGVLLGLSNTAGVLAG 409 (454)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~g~ 409 (454)
...++.....+..... . ....+...+. .+++.-+.....-......+ ....|++.|-++.......+.|.
T Consensus 106 ---q~llG~~mllLs~~v~~~~g~ng~~p~v~~lt~~f~LLnflaAtQDIAVDgwALtmLs~e~lgyaST~q~Vg~~~Gy 182 (510)
T KOG3574|consen 106 ---QYLLGLFMLLLSYLVDRGLGGNGGLPNVVALTLLFLLLNFLAATQDIAVDGWALTMLSRENLGYASTCQSVGQTAGY 182 (510)
T ss_pred ---HHHHHHHHHHHhhCCCcccccCCCCcchHHHHHHHHHHHHHHhhhhhhhhHHHHHhcCHhhcCchhHHHHHHHhhhH
Confidence 1112221111111110 0 0111111111 21222222222222222222 34567777766666555566666
Q ss_pred HHHHHHHHHHhcc----------------CCchhHHHHHHHHHHHHHHHHHHhccCCc
Q 012902 410 VFGTAATGYILQH----------------GSWDDVFKVSVGLYLVGTAVWNLFSTGEK 451 (454)
Q Consensus 410 ~~~~~~~g~l~~~----------------~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 451 (454)
+++-.+.=.+... .......++-+.+..++..+..++.+++.
T Consensus 183 fL~~~ifLaL~s~dF~N~y~rs~P~~~g~ItL~gy~~fwg~~~~vat~Lv~~~kke~~ 240 (510)
T KOG3574|consen 183 FLGNVVFLALESPDFCNTYLRSIPLDQGFITLAGYLWFWGALFIVATTLVALLKKEND 240 (510)
T ss_pred HhhcceeeEecChhhhhHHHhcCcCccceEEhhHHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 6655444333220 11234456666777777776666666554
No 294
>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism]
Probab=92.94 E-value=2.8 Score=38.76 Aligned_cols=177 Identities=11% Similarity=0.079 Sum_probs=96.8
Q ss_pred CcchHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCcccchhhHhHHHHHHHHHHHHHHHHHhhhhhhcCccchhhHHHHH
Q 012902 262 KPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQ 341 (454)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~ 341 (454)
++....+...++...++-=....-...|+.+..|-|....+....+-+....+-..+.|...|+..|.|...... .+-
T Consensus 26 s~~~i~Ly~gy~lt~wgdR~W~F~VsL~M~~L~gnsl~lvAvyglvesgs~lvlg~ivGq~vDg~sr~Kvi~~~L--~lq 103 (503)
T KOG2601|consen 26 SSTVIFLYLGYFLTTWGDRMWEFSVSLFMILLGGNSLLLVAVYGLVESGSQLVLGPIVGQWVDGMSRVKVIQTWL--LLQ 103 (503)
T ss_pred cceeehhhHHHHHhHhhHhHHHHHHHHHHHHHcCceehhHHHHHHHHHhHHHhhHHHHHHHhcchhHHHHHHHHH--hhc
Confidence 444555667777777777777777788888866655555555555555555666677788889999887654322 111
Q ss_pred HHHHHHHHHHHHHhhccC-----hhHHHHHHHHHHHhhhhhhcchhh----hhhc--------ccccccchhHHHHHHHH
Q 012902 342 SIGFLGPAFFLTQLSHVD-----SPAMAVLCMACSQGTDAFSQSGLY----SNHQ--------DIAPRYSGVLLGLSNTA 404 (454)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~----~~~~--------~~~~~~~~~~~g~~~~~ 404 (454)
-.+.+.++..+......+ ...++..+..+....+.+...... .... .-+|+.....++.....
T Consensus 104 NlSv~vagglvi~~l~~~~~~~~t~pv~t~~lvLa~~i~aI~~Las~A~~i~i~RDWvvV~s~g~s~s~lt~mnatir~i 183 (503)
T KOG2601|consen 104 NLSVIVAGGLVITLLVHKDLKSATSPVFTVCLVLANLIAAIAVLASLAGTILIERDWVVVMSEGESPSVLTNMNATIRGI 183 (503)
T ss_pred cHHHHHHHHHHhhheeecchhcccccHHHHHHHHHHHHHHHHHHHHhhheEEecccEEEEecCCCCHHHHhhcchhhhhh
Confidence 122222222222211111 222333333332222222111111 1111 11222333444666666
Q ss_pred HHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHH
Q 012902 405 GVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGT 440 (454)
Q Consensus 405 ~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~ 440 (454)
-..-..+.|.+.|.+.+..+.+......++...+..
T Consensus 184 Dq~tn~Lapv~tg~Iitfvsl~~~~g~f~~w~~vsm 219 (503)
T KOG2601|consen 184 DQSTNLLAPVITGLIITFVSLRASAGTFAAWALVSM 219 (503)
T ss_pred hhhhhchhhhhhcccceeechhhhhhhhHHHHHHHH
Confidence 777889999999999999888876666666655543
No 295
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=92.28 E-value=2.4 Score=38.82 Aligned_cols=134 Identities=8% Similarity=-0.003 Sum_probs=88.2
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhccccchHH--HHHHHHHHHHHHhhhhhcccccHHHHHHHHHHHHhhcccchhhhhHHH
Q 012902 84 GLIQSSFFWGYLLTQIAGGIWADTVGGKAV--LGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNIL 161 (454)
Q Consensus 84 g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~--~~~~~~~~~~~~~l~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i 161 (454)
|..-.+..+..+++.+..|.+--++.|..- +..+.+.-+...++++.++ +.|..+++-++.+.--....+.+..-+
T Consensus 274 G~veAv~tlLGa~~~~~~g~l~i~w~r~g~~ll~~~s~~~agllf~m~~t~--~Iw~~Ya~yvlfr~~y~l~itiA~~~i 351 (433)
T KOG3810|consen 274 GAVEAVSTLLGAIAALAAGYLNINWNRWGDLLLAVGSAVQAGLLFIMAQTQ--HIWVCYAGYVLFRVIYQLTITIATFQI 351 (433)
T ss_pred CHHHHHHHHHHHHHHHHHHheeeccchhhHHHHHHHHHHhhhhhhhhhccc--ceehhhhhHHHHHhhHhhhhhHHHHHH
Confidence 555666777788899999999888877644 4445555555556666677 899988888888777777788888888
Q ss_pred hhhcCccchHHHHHHHHhhHHHHHHhHHhHHHHHhhccC-----------cchhHHHHhHHHHHHHHHHHHh
Q 012902 162 SKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFG-----------WPSVFYSFGSLGTVWFTVWLSK 222 (454)
Q Consensus 162 ~~~~~~~~rg~~~~~~~~~~~~g~~ig~~l~~~l~~~~g-----------wr~~f~~~~~~~~~~~~~~~~~ 222 (454)
++....|.-|..+|+.....- ++=.++.-...|.-| +-.-|.+.+.+.++........
T Consensus 352 A~nL~~e~~gLvFGiNTFvAl---~lQsilT~iVvd~~g~~L~ir~Q~~~Y~~Yf~v~~~i~~~~~~~~~~~ 420 (433)
T KOG3810|consen 352 ARNLSSELFGLVFGINTFVAL---ILQSILTLIVVDDRGLGLDIRTQFVVYSSYFIVLGVIFLIGFGIEYLM 420 (433)
T ss_pred HHhhhhhhheeeeehHHHHHH---HHHHhheEEEEcccccCCCcceeEEEEeehHHHHHHHHHHHHHHHHHH
Confidence 888877888888887765432 233333333334221 2234566666666654444443
No 296
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=92.21 E-value=6.1 Score=39.53 Aligned_cols=176 Identities=13% Similarity=0.066 Sum_probs=105.1
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHhCCcccchhhHhHHHHHHHHHHHHHHHHHhhhhhhc-CccchhhHHHHHHHHHH
Q 012902 268 LIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSK-GLSVTTVRKIMQSIGFL 346 (454)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~-~~~~~~~~~~~~~~~~~ 346 (454)
.+..-.+-..+++++...+-.|+.+.++.+...+.-....+........+.+++++|.+--| +.+..+. .+..+++.
T Consensus 42 il~~e~~e~~a~~g~~~nlv~ylt~~~~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry~tI~~~s--~i~~~G~~ 119 (571)
T KOG1237|consen 42 ILGNEVLERLAFFGLVSNLVTYLTLELHASGGGAANNVNAFGGTQFLLPLLGAFLADSFLGRYFTINIGS--LISLLGLF 119 (571)
T ss_pred HHHHHHHHHHhHhcchhHHHHHHHHHhccchHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHHHHHH--HHHHHHHH
Confidence 44444555566667777888899998998888787777777777788888999999987555 2211111 11111111
Q ss_pred HHHHHHHHhh--c-------c----Ch---hH--H-HHHHHHHHHhhhhhhcchhhhhh-cccc---c-c--cchhHHHH
Q 012902 347 GPAFFLTQLS--H-------V----DS---PA--M-AVLCMACSQGTDAFSQSGLYSNH-QDIA---P-R--YSGVLLGL 400 (454)
Q Consensus 347 ~~~~~~~~~~--~-------~----~~---~~--~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~---~-~--~~~~~~g~ 400 (454)
+......... . . +. .. . .........+.+ ..-+...... +..+ | + ....-+..
T Consensus 120 ~lt~~a~~~~l~p~~~~~~~~~~~c~~~s~~q~~~~~~~l~lia~G~g-g~r~~~~~fGadQfd~~~~~~~~~~~~fFnW 198 (571)
T KOG1237|consen 120 GLTLSAMIPALLPFMCKFKPGGNVCESPSKLQLAVLYGALYLIALGAG-GIRPCLLAFGADQFDELDPVEVKGIPSFFNW 198 (571)
T ss_pred HHHHHHHhhhcCCccccCCCCCCcccCcchHHHHHHHHHHHHheeccC-CCCCcchhhcccccCccCcchhhCcccchhH
Confidence 1111111110 0 0 00 01 1 111111122222 2233333333 3333 3 2 34577888
Q ss_pred HHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHHHHh
Q 012902 401 SNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTAVWNLF 446 (454)
Q Consensus 401 ~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 446 (454)
.....+.|..++..+.-++-|+.+|...|.+..+..+++.++++.-
T Consensus 199 ~yf~~~~g~l~a~t~~vyiq~~~~w~lgf~i~~~~~~lai~iF~~g 244 (571)
T KOG1237|consen 199 FYFSQNGGALLAQTVLVYIQDNVGWKLGFGIPTVLNALAILIFLPG 244 (571)
T ss_pred HHHHHHHHHHHHHHHHHhhhhcccceeeccHHHHHHHHHHHHHHcC
Confidence 8889999999999999999899999999999998888887766553
No 297
>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism]
Probab=91.18 E-value=4.1 Score=37.69 Aligned_cols=158 Identities=14% Similarity=0.090 Sum_probs=85.4
Q ss_pred HHhhhchhhhhcchhhhhhcCCC-hhhHHHHHHHHHHHHHHhhhhhhhhhccccchHHHHHHHHHHHHHHhh------hh
Q 012902 57 FIVFGQVNMSIAILPMSAEFNWN-PATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATAL------TP 129 (454)
Q Consensus 57 ~~~~~~~~~~~~~~~i~~~~~~s-~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~l------~~ 129 (454)
....+.-.+.........+++-+ ....+.-.-.-.....+..++.|...|+..|+|++...+++--++..+ .-
T Consensus 38 lt~wgdR~W~F~VsL~M~~L~gnsl~lvAvyglvesgs~lvlg~ivGq~vDg~sr~Kvi~~~L~lqNlSv~vagglvi~~ 117 (503)
T KOG2601|consen 38 LTTWGDRMWEFSVSLFMILLGGNSLLLVAVYGLVESGSQLVLGPIVGQWVDGMSRVKVIQTWLLLQNLSVIVAGGLVITL 117 (503)
T ss_pred HhHhhHhHHHHHHHHHHHHHcCceehhHHHHHHHHHhHHHhhHHHHHHHhcchhHHHHHHHHHhhccHHHHHHHHHHhhh
Confidence 45555555666555555555532 223333333344455677888899999999999988766554333222 22
Q ss_pred hccc----ccHHHHHHHHHHHHhhcc--cchhhhhHH--Hhhhc----CccchHHHH---HHHHhhHHHHHHhHHhHHHH
Q 012902 130 VAAK----LGLPFLLVVRVFMGIGEG--VAMPAMNNI--LSKWV----PVAERSRSL---ALVYSGMYLGSVTGLAFSPF 194 (454)
Q Consensus 130 ~~~~----~~~~~l~~~r~l~G~~~g--~~~~~~~~~--i~~~~----~~~~rg~~~---~~~~~~~~~g~~ig~~l~~~ 194 (454)
+... .+++.+..+-++.-.-.+ -....+.++ =.||. ..|.+.... +..-..--.-..+.|.+.|.
T Consensus 118 l~~~~~~~~t~pv~t~~lvLa~~i~aI~~Las~A~~i~i~RDWvvV~s~g~s~s~lt~mnatir~iDq~tn~Lapv~tg~ 197 (503)
T KOG2601|consen 118 LVHKDLKSATSPVFTVCLVLANLIAAIAVLASLAGTILIERDWVVVMSEGESPSVLTNMNATIRGIDQSTNLLAPVITGL 197 (503)
T ss_pred eeecchhcccccHHHHHHHHHHHHHHHHHHHHhhheEEecccEEEEecCCCCHHHHhhcchhhhhhhhhhhchhhhhhcc
Confidence 3321 134444444433332211 111222222 23443 334444444 45555555567889999999
Q ss_pred HhhccCcchhHHHHhHHHHH
Q 012902 195 LIHRFGWPSVFYSFGSLGTV 214 (454)
Q Consensus 195 l~~~~gwr~~f~~~~~~~~~ 214 (454)
+.+..+-|..-...++-.++
T Consensus 198 Iitfvsl~~~~g~f~~w~~v 217 (503)
T KOG2601|consen 198 IITFVSLRASAGTFAAWALV 217 (503)
T ss_pred cceeechhhhhhhhHHHHHH
Confidence 98887777765555555554
No 298
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=90.16 E-value=4.5 Score=35.51 Aligned_cols=49 Identities=4% Similarity=-0.335 Sum_probs=23.7
Q ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHh----CCcccchhhHhHHHHHHHHHHHH
Q 012902 269 IVSHFCHNWGTFILLTWMPTYYNQVL----HFNLTESGLFCVLPWLTMAFSAN 317 (454)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~l~~~~----g~s~~~~~~~~~~~~~~~~~~~~ 317 (454)
.+.........++....=..|.+|+. +-|.....++++-+......+.+
T Consensus 184 G~~LAv~aGvlyGs~fvPv~Yi~~~~~~y~~as~~~ldYvFs~f~GIfltSt~ 236 (254)
T PF07857_consen 184 GIILAVFAGVLYGSNFVPVIYIQDHPDIYPGASQNGLDYVFSHFSGIFLTSTV 236 (254)
T ss_pred hHHHHHHHHHHHhcccchHHHHHhCccccCCCCCcchheeHHHHhhHHHHHHH
Confidence 33334444455566555566777753 33444444444444333333333
No 299
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=89.62 E-value=0.77 Score=41.03 Aligned_cols=116 Identities=11% Similarity=0.054 Sum_probs=80.4
Q ss_pred hhcCCCh-hhHHHHHHHHHHHHHHhhhhhhhhhccccc-h--HHHHH---HHHHHHHHHhhhhhcccccHHHHHHHHHHH
Q 012902 74 AEFNWNP-ATVGLIQSSFFWGYLLTQIAGGIWADTVGG-K--AVLGF---GVVWWSIATALTPVAAKLGLPFLLVVRVFM 146 (454)
Q Consensus 74 ~~~~~s~-~~~g~~~s~~~~~~~~~~~~~g~l~dr~Gr-r--~~~~~---~~~~~~~~~~l~~~~~~~~~~~l~~~r~l~ 146 (454)
+.+..+. +|.-|....|.+|-.+..- +-|+=+ + +.+.+ --+++.+...+..+.+ ++|..++.-+..
T Consensus 280 ~g~sls~~sqYRwyqvlYQlGVFiSRS-----S~~~~~~p~l~~LailQ~vNl~ff~~~a~~~ftp--si~ivf~lI~~E 352 (409)
T KOG3880|consen 280 HGFSLSKDSQYRWYQVLYQLGVFISRS-----SINLFTMPYLWLLAILQFVNLLFFLLQAWYWFTP--SIWIVFALILFE 352 (409)
T ss_pred cCCccchhhcchhhheeeeeeEEEEec-----cceEEechHHHHHHHHHHHHHHHHHHHHHHHhcc--HHHHHHHHHHHH
Confidence 4444443 4578888888876443321 222111 1 22222 2233444555566788 889888899999
Q ss_pred HhhcccchhhhhHHHhhhcCccchHHHHHHHHhhHHHHHHhHHhHHHHHh
Q 012902 147 GIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLI 196 (454)
Q Consensus 147 G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~ig~~l~~~l~ 196 (454)
|+-.|..++...--+.+-.++++|..+++....+-++|..++..++-.+.
T Consensus 353 GLlGGasYVNTf~~i~~e~~pd~rEfamsavs~sDS~Gi~lA~~lalplh 402 (409)
T KOG3880|consen 353 GLLGGASYVNTFHNIHKETEPDVREFAMSAVSISDSIGIFLAGLLALPLH 402 (409)
T ss_pred hhcCchHHHHHHHHHhhcCCchHHHHhHhhheecchhhHHHHHHHhccch
Confidence 99999999988888888888999999999999999999988887765543
No 300
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=86.22 E-value=11 Score=33.42 Aligned_cols=136 Identities=13% Similarity=0.041 Sum_probs=83.6
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhhccccch--HHHHHHHHHHHHHHhhhh----hccc-ccHHHHHHHHHHHHhhcccchh
Q 012902 83 VGLIQSSFFWGYLLTQIAGGIWADTVGGK--AVLGFGVVWWSIATALTP----VAAK-LGLPFLLVVRVFMGIGEGVAMP 155 (454)
Q Consensus 83 ~g~~~s~~~~~~~~~~~~~g~l~dr~Grr--~~~~~~~~~~~~~~~l~~----~~~~-~~~~~l~~~r~l~G~~~g~~~~ 155 (454)
-|.+.+.++++.++|+-+..++..|-..| ..+.+..+...+...+.- .+|. .+...=+++-.+.-.+.|..+|
T Consensus 284 hGfiFatFMlASmLGSSla~Rl~s~s~~~ve~ymqivf~vs~a~l~Lpilt~~vsP~kes~~~s~i~F~~~E~cvGlfwP 363 (454)
T KOG4332|consen 284 HGFIFATFMLASMLGSSLASRLLSRSSPKVESYMQIVFLVSIAALLLPILTSSVSPSKESPSESLIGFCLFEACVGLFWP 363 (454)
T ss_pred chhHHHHHHHHHHHhhHHHHHHHhcCCcccchHHHHHHHHHHHHHHHHHHHhccCCCcCCchHHHHHHHHHHHHHhhcch
Confidence 48899999999999999998888775554 334444444443333322 2221 0121223344444556688999
Q ss_pred hhhHHHhhhcCccchHHHHHHHHhhHHHHHHhHHhHHHHHhhccCcchhHHHHhHHHHHHHHH
Q 012902 156 AMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTV 218 (454)
Q Consensus 156 ~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~ig~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~ 218 (454)
..+.+=+++.|++.|...+.++..-.++-..++-..--.=....+-|..|-+..+...+..+.
T Consensus 364 SimkmRsqyIPEearstimNfFRvPLnifvClvLynlh~~~~p~~tr~mf~icS~~~~~a~i~ 426 (454)
T KOG4332|consen 364 SIMKMRSQYIPEEARSTIMNFFRVPLNIFVCLVLYNLHVDAFPTTTRNMFGICSAFLFVASIL 426 (454)
T ss_pred HHHHHHHhhCCHHHHhhhhhheechhhHhhhhhheecccccCccccchhhhhhHHHHHHHHHH
Confidence 999999999999999999988876555543333211000001235677888777766665443
No 301
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=84.77 E-value=7.4 Score=37.68 Aligned_cols=67 Identities=7% Similarity=0.060 Sum_probs=38.9
Q ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHHH-HhCCcccchhhHh---HHHHHHHHHHHHHHHHHhhhhhhcCcc
Q 012902 266 WALIVSHFCHNWGTFILLTWMPTYYNQ-VLHFNLTESGLFC---VLPWLTMAFSANLGGWIADTLVSKGLS 332 (454)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~g~s~~~~~~~~---~~~~~~~~~~~~~~g~l~dr~~~~~~~ 332 (454)
..+.+.+++++........-.|..+++ ..+.|-.+.+... -++++=-.=+.++=...++|+||||..
T Consensus 3 ~lL~~LY~lQGiP~GL~~gsiPflL~~~~~~~sy~q~~~fSla~~PfSlKlLWaPiVDs~y~~~~GRRKSW 73 (544)
T PF13000_consen 3 ALLVLLYFLQGIPLGLAFGSIPFLLQSMAKKVSYSQQAIFSLASYPFSLKLLWAPIVDSVYSKRIGRRKSW 73 (544)
T ss_pred eHHHHHHHHcCcccccccccchhhhccccCCCChhHheeeeeeechhHHHHhhhhhhhhhcccccCCcchh
Confidence 455666777776666555678888887 1244444444332 233333333444455677789999643
No 302
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=83.61 E-value=0.38 Score=44.04 Aligned_cols=107 Identities=12% Similarity=0.066 Sum_probs=3.8
Q ss_pred HHHHHHHHHHHhhhhhhhhhcc-ccchHHHHHHH--HHHHHHHhhhhh----------cccccHHHHHHHHHHHHhhccc
Q 012902 86 IQSSFFWGYLLTQIAGGIWADT-VGGKAVLGFGV--VWWSIATALTPV----------AAKLGLPFLLVVRVFMGIGEGV 152 (454)
Q Consensus 86 ~~s~~~~~~~~~~~~~g~l~dr-~Grr~~~~~~~--~~~~~~~~l~~~----------~~~~~~~~l~~~r~l~G~~~g~ 152 (454)
...+++++-.+|..+.++.-=+ -.+|+...... +++.-..++|.. -+ |-+..++.-++.|+..|-
T Consensus 187 ~fl~Fn~gD~iGR~l~~~~~~~~~~~~~l~~~s~~R~~fiPlf~~cn~~p~~~~~~~~~~--~d~~~~i~~~l~g~TNGy 264 (309)
T PF01733_consen 187 LFLLFNLGDFIGRFLASWPRWPGPSPRWLWILSLLRFLFIPLFLLCNVQPRPRYLPVLFN--SDAWFIILMLLFGFTNGY 264 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHhcchhcceeEecccccccHHHHHHHHHHHHHHHHHHHhhcccccCCCccc--chHHHHHHHHHHHHccch
Confidence 4567888888998887764211 13444443322 222222233322 22 457778889999999999
Q ss_pred chhhhhHHHhhhcCccchHHHHHHHHhhHHHHHHhHHhHHHH
Q 012902 153 AMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPF 194 (454)
Q Consensus 153 ~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~ig~~l~~~ 194 (454)
..+..+.+..+..++++|..+-.+......+|..+|..++-.
T Consensus 265 l~tl~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs~ls~~ 306 (309)
T PF01733_consen 265 LSTLAMMYAPKSVSPEERELAGSVMSFFLSFGLFIGSVLSFL 306 (309)
T ss_dssp --HHHH------------------------------------
T ss_pred hhhceeeeCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999888888888888888776543
No 303
>PF02990 EMP70: Endomembrane protein 70; InterPro: IPR004240 The transmembrane 9 superfamily protein (TM9SF) may function as a channel or small molecule transporter. Proteins in this group are endosomal integral membrane proteins.; GO: 0016021 integral to membrane
Probab=82.84 E-value=45 Score=33.20 Aligned_cols=74 Identities=9% Similarity=0.147 Sum_probs=31.5
Q ss_pred hHhhcCcchHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCcccchhhHhHH----HHHHHHHHHHHHHHHhhhhhhcCc
Q 012902 257 GLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVL----PWLTMAFSANLGGWIADTLVSKGL 331 (454)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~----~~~~~~~~~~~~g~l~dr~~~~~~ 331 (454)
.|++|.|+-. ..+..+................+.-..-.++..-|.+... +.+.+.++...++++...++.++-
T Consensus 252 gDVFR~P~~~-~lls~lvG~G~Qll~~~~~~~~~a~~g~~~~~~rg~l~t~~i~~y~~~~~iaGy~S~~~yk~~~g~~W 329 (521)
T PF02990_consen 252 GDVFRPPKHP-MLLSALVGTGIQLLFMALVTLFFAALGFLSPNNRGSLLTAAIILYALTSFIAGYVSARLYKSFGGKKW 329 (521)
T ss_pred HHHhcCcCCc-hHHHhHhcchhhhhHHHHHHHHHHHhhhccccCcchHHHHHHHHHHHHhhHHHHHHHHHHHHcCCCce
Confidence 4577777632 2222222222222222233333332212344444444443 444555555555555555655543
No 304
>COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only]
Probab=74.40 E-value=74 Score=29.55 Aligned_cols=97 Identities=15% Similarity=0.157 Sum_probs=62.8
Q ss_pred hcchhhhhhc-CCChhhHHHHHHHHHHHHHHhhhhhhhhhccccchHHH----HHHHHHHHHHHhhh-hhcc--cccHHH
Q 012902 67 IAILPMSAEF-NWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVL----GFGVVWWSIATALT-PVAA--KLGLPF 138 (454)
Q Consensus 67 ~~~~~i~~~~-~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~----~~~~~~~~~~~~l~-~~~~--~~~~~~ 138 (454)
..+..+...+ |-+--|.+.+.+.|.....+|+...-++.|.--.-+.+ ..|++.-.-..++. .|+. ..+-+.
T Consensus 28 lal~tLatyLlG~~Ilq~S~Iia~yl~amGlGs~~sry~~dd~~~~~Fv~vElllgligg~Sa~~ly~~FA~~~~~~~~V 107 (508)
T COG4262 28 LALGTLATYLLGGGILQTSLIIAGYLAAMGLGSLLSRYVLDDAALARFVDVELLLGLIGGVSAAALYLLFALESAPSRLV 107 (508)
T ss_pred HHHHHHHHHhcCCceeehHHHHHHHHHHhchhhhhhccccCchHHHHHHHHHHHHHHhccchHHHHHHHHHhccchHHHH
Confidence 3344455444 44567889999999999999999998888754333222 22222111111111 2332 115678
Q ss_pred HHHHHHHHHhhcccchhhhhHHHhh
Q 012902 139 LLVVRVFMGIGEGVAMPAMNNILSK 163 (454)
Q Consensus 139 l~~~r~l~G~~~g~~~~~~~~~i~~ 163 (454)
+++.-++.|.-.|...|..+.++..
T Consensus 108 ly~lt~vIG~LVG~EiPL~mrml~~ 132 (508)
T COG4262 108 LYALTAVIGVLVGAEIPLLMRMLQR 132 (508)
T ss_pred HHHHHHHHHHHHhcchHHHHHHHHH
Confidence 8899999999999999999998877
No 305
>PF06912 DUF1275: Protein of unknown function (DUF1275); InterPro: IPR010699 This family consists of several hypothetical bacterial proteins of around 200 residues in length. The function of this family is unknown although a few members are thought to be membrane proteins.
Probab=70.90 E-value=65 Score=27.39 Aligned_cols=39 Identities=23% Similarity=0.399 Sum_probs=22.0
Q ss_pred hhcCccchHHHHHHHHhhHHHHHHhHHhHHHHHhhccCc
Q 012902 163 KWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGW 201 (454)
Q Consensus 163 ~~~~~~~rg~~~~~~~~~~~~g~~ig~~l~~~l~~~~gw 201 (454)
|+...|++.+--.......-++..+|..+++.+.+..+.
T Consensus 153 ~~~~~~~~~~~~~~~~~~~i~~f~~Ga~~ga~l~~~~~~ 191 (209)
T PF06912_consen 153 RYLRGKDRALRRALRYLLIILSFFIGAILGALLYRRLGF 191 (209)
T ss_pred HHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 333334333334444555556667777777777777664
No 306
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=69.32 E-value=17 Score=29.04 Aligned_cols=30 Identities=17% Similarity=0.162 Sum_probs=22.1
Q ss_pred hhhhhcccccccchhHHHHHHHHHHHHHHH
Q 012902 382 LYSNHQDIAPRYSGVLLGLSNTAGVLAGVF 411 (454)
Q Consensus 382 ~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~ 411 (454)
+-.....-+|++-|+..|+-.+-.|++...
T Consensus 116 YGilSaSWD~~r~GSllG~~e~~~N~~r~~ 145 (153)
T PF11947_consen 116 YGILSASWDPEREGSLLGWEEFKRNWGRMW 145 (153)
T ss_pred hhhcccccCCCCCCCcccHHHHHHhHHHHH
Confidence 334455677888999999988888887654
No 307
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=68.24 E-value=26 Score=25.84 Aligned_cols=39 Identities=13% Similarity=0.200 Sum_probs=29.4
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHHHhcc-CCchhHHH
Q 012902 392 RYSGVLLGLSNTAGVLAGVFGTAATGYILQH-GSWDDVFK 430 (454)
Q Consensus 392 ~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~-~g~~~~~~ 430 (454)
+.++.+.++-...-.+++.+.....|++.|+ .+-.+.+.
T Consensus 38 s~k~~~~a~klssefIsGilVGa~iG~llD~~agTsPwgl 77 (116)
T COG5336 38 SIKGYAQAFKLSSEFISGILVGAGIGWLLDKFAGTSPWGL 77 (116)
T ss_pred hhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHH
Confidence 4578888888888888898889999999998 33333333
No 308
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=65.07 E-value=1e+02 Score=27.36 Aligned_cols=100 Identities=18% Similarity=0.266 Sum_probs=53.6
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhcc-ccchHHHH----HHHHHHHHHHhhh-hhccc--ccHHHHHHHHHHHHhhcccchh
Q 012902 84 GLIQSSFFWGYLLTQIAGGIWADT-VGGKAVLG----FGVVWWSIATALT-PVAAK--LGLPFLLVVRVFMGIGEGVAMP 155 (454)
Q Consensus 84 g~~~s~~~~~~~~~~~~~g~l~dr-~Grr~~~~----~~~~~~~~~~~l~-~~~~~--~~~~~l~~~r~l~G~~~g~~~~ 155 (454)
....-++..+..+|....|++... +.||+-+. .+.++..+..+.. ...+. .+...+++.-++.|++.=+.++
T Consensus 144 ~~~~I~fv~g~~~G~~~ig~~nkt~~kRk~fi~~~~~~gi~~~~l~~~~~~~~g~~~~~~~~~f~I~~Fl~G~f~WgiQ~ 223 (267)
T PF07672_consen 144 PIFQILFVAGYFLGPFTIGLWNKTNYKRKPFIHFIISLGIVFFVLSIVVVYFVGPGNAAGFAFFYIFGFLAGFFLWGIQG 223 (267)
T ss_pred HHHHHHHHHHHhhhceeeccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhhhH
Confidence 444556667777777888888764 45555543 3445555554442 12221 1356788888888887644444
Q ss_pred hhhHHHhhhc---CccchHHHHHHHHhhHHHHHHh
Q 012902 156 AMNNILSKWV---PVAERSRSLALVYSGMYLGSVT 187 (454)
Q Consensus 156 ~~~~~i~~~~---~~~~rg~~~~~~~~~~~~g~~i 187 (454)
.... +.+-+ .|++-|...| ..+++|.+.
T Consensus 224 ViL~-lPhEyK~~~pk~ig~~Fg---~iWGfGY~~ 254 (267)
T PF07672_consen 224 VILN-LPHEYKGYNPKKIGIQFG---LIWGFGYIF 254 (267)
T ss_pred HHhc-ChhhhcCCCcceehhHHH---HHHHHHHHH
Confidence 4332 23333 2344444444 445555443
No 309
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=62.52 E-value=1.1e+02 Score=28.20 Aligned_cols=99 Identities=10% Similarity=0.069 Sum_probs=48.1
Q ss_pred cchHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCcccchhhHhHHHHHHHHHHHHHHHHHhhhhhhcCccchhhHHHHHH
Q 012902 263 PPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQS 342 (454)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~ 342 (454)
|+++.+.....+.+..+.+....... .+.+.....+ ......-+...++.+.+.+++|.| +.+.
T Consensus 29 knv~i~s~~fl~~f~a~~gl~nlq~~-----vn~~lg~~sl--~~~y~~l~~s~m~~~~~Ir~~g~K---------~tm~ 92 (390)
T KOG3097|consen 29 KNVLILSIAFLLTFTAYLGLQNLQTS-----VNYDLGTVSL--GALYLSLIDSSMFMPLLIRFLGTK---------WTMV 92 (390)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHH-----HhcCcccchh--hhhhHHHHHHHHHHHHHHHHHhhH---------HHHH
Confidence 45666666666666555554332221 1222222211 222344456666777999999988 4444
Q ss_pred HHHHHHHHHHHHhhccChhHHHHHHHHHHHhhhhh
Q 012902 343 IGFLGPAFFLTQLSHVDSPAMAVLCMACSQGTDAF 377 (454)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 377 (454)
+.+..................+......+.+.+..
T Consensus 93 lav~~Y~lyiA~Nl~pr~~tlVPa~~~~G~aa~p~ 127 (390)
T KOG3097|consen 93 LAVFPYALYIAANLEPRYETLVPAGLVLGMAAGPI 127 (390)
T ss_pred HHHHHHHHHHHhhcchhHHhhccHHHhhccccccc
Confidence 44444444333322222333344445555554443
No 310
>PF05255 UPF0220: Uncharacterised protein family (UPF0220); InterPro: IPR007919 This family of proteins is functionally uncharacterised.
Probab=58.52 E-value=1e+02 Score=25.20 Aligned_cols=57 Identities=11% Similarity=0.074 Sum_probs=32.7
Q ss_pred hcCccchHHHHHHHHhhHHHHHHhHHhHHHHHhhcc------CcchhHHHHhHHHHHHHHHHH
Q 012902 164 WVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRF------GWPSVFYSFGSLGTVWFTVWL 220 (454)
Q Consensus 164 ~~~~~~rg~~~~~~~~~~~~g~~ig~~l~~~l~~~~------gwr~~f~~~~~~~~~~~~~~~ 220 (454)
.+|.+++.+..+.+.++.-.+...--.+=+.+.+.. .+...+++.++.+.+..++.-
T Consensus 14 ~~~~~~~~~~~~~~~AGaLF~~gwWi~iDa~v~s~~~~~~~~~~~f~~~ipgI~stlgm~mvN 76 (166)
T PF05255_consen 14 WFDWSEKRNAIGSYVAGALFALGWWIFIDAAVYSKHANGSDVHVTFVDWIPGIFSTLGMFMVN 76 (166)
T ss_pred CCCchHhHHHHHHHHHHHHHHHHHHHHHHHHHhCCccCCCCccccceeeehHHHHHHHHHHhc
Confidence 445556666666655554444444444444443322 577788888888887755443
No 311
>COG1457 CodB Purine-cytosine permease and related proteins [Nucleotide transport and metabolism]
Probab=57.63 E-value=1.9e+02 Score=28.04 Aligned_cols=147 Identities=8% Similarity=-0.168 Sum_probs=73.7
Q ss_pred hhhcCccchHHHHHHHHhhHHHHHHhHHhHHHHHhh-ccCcchhHHHHhHHHHHHHHHHHHhcCCCCCCCCCCChhhhhh
Q 012902 162 SKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIH-RFGWPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKL 240 (454)
Q Consensus 162 ~~~~~~~~rg~~~~~~~~~~~~g~~ig~~l~~~l~~-~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (454)
.|..|+|+|--.........+.-..++....|.+.. ..++++..+....-.++..++...+--..++..-+.
T Consensus 11 ~~~vp~~~r~~~~~~~~vWfga~~~ias~~~G~ll~~~L~~~~si~aillG~llG~i~~A~~s~~Ga~~Glpq------- 83 (442)
T COG1457 11 IEPVPEESRKGWLNLFLVWFGANFTIASMVTGGLLVPGLSFGQSLLAILLGNLLGGIFMAYFSYQGARTGLPQ------- 83 (442)
T ss_pred CCCCChhhhhcchhHHHHHHHhHhHHHHHHHhccccccccHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCh-------
Confidence 466777777444455555444444444444444333 256666655543333333333322222222111110
Q ss_pred hhhccccCCCCCCcchhHhhcCcchHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCcccchhhHhHHHHHHHHHHHHHHH
Q 012902 241 IVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGG 320 (454)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g 320 (454)
....|..+-.+.-+...+.......++++.+.++.-.... ..+...........++...+..+++-
T Consensus 84 ------------mi~sR~~fG~~Gs~l~sll~~~~~iGW~~v~~~l~~~a~~--~~~~~~~~~~ili~g~l~~l~~ifG~ 149 (442)
T COG1457 84 ------------MILSRYPFGVKGSILPSLLNGITLIGWFGVNVILSGIAIG--SGTGLPVWAGILIIGVLMTLVTIFGY 149 (442)
T ss_pred ------------heeecccccchhHHHHHHHHHHHHhhHHHHHHHHhccccc--cCCCCcHHHHHHHHHHHHHHHHHHhH
Confidence 0111123444444556666666667777777666544311 11333445555566667777777777
Q ss_pred HHhhhhhhc
Q 012902 321 WIADTLVSK 329 (454)
Q Consensus 321 ~l~dr~~~~ 329 (454)
+...++.|-
T Consensus 150 r~l~~l~~~ 158 (442)
T COG1457 150 RALHKLERI 158 (442)
T ss_pred HHHHHHHHH
Confidence 888877765
No 312
>COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only]
Probab=53.46 E-value=1.9e+02 Score=26.98 Aligned_cols=34 Identities=15% Similarity=0.179 Sum_probs=19.7
Q ss_pred HHHhCCcccchhhHhHHHHHHHHHHHHHHHHHhh
Q 012902 291 NQVLHFNLTESGLFCVLPWLTMAFSANLGGWIAD 324 (454)
Q Consensus 291 ~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d 324 (454)
..-.|-+..+.+++.+.+....-+|+...-++.|
T Consensus 35 tyLlG~~Ilq~S~Iia~yl~amGlGs~~sry~~d 68 (508)
T COG4262 35 TYLLGGGILQTSLIIAGYLAAMGLGSLLSRYVLD 68 (508)
T ss_pred HHhcCCceeehHHHHHHHHHHhchhhhhhccccC
Confidence 3335666667777766666655555555544433
No 313
>PRK00293 dipZ thiol:disulfide interchange protein precursor; Provisional
Probab=53.45 E-value=2.6e+02 Score=28.35 Aligned_cols=32 Identities=25% Similarity=0.183 Sum_probs=18.5
Q ss_pred cccchhhHhHHHHHHHHHHHHHHHHHhhhhhh
Q 012902 297 NLTESGLFCVLPWLTMAFSANLGGWIADTLVS 328 (454)
Q Consensus 297 s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~ 328 (454)
++...+..+..++++..+--++.+....|+.+
T Consensus 323 ~~~~g~~~l~~~gLG~~~Plll~~~~~~~~lp 354 (571)
T PRK00293 323 DLLLGGLTLYLLALGMGLPLILITTFGNKLLP 354 (571)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 45555666777777775555555555544433
No 314
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=50.56 E-value=41 Score=24.85 Aligned_cols=52 Identities=15% Similarity=0.139 Sum_probs=43.3
Q ss_pred hhHHHHHHHHHHHHHHhhhhhhhhhccccchHHHHHHHHHHHHHHhhhhhcc
Q 012902 81 ATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAA 132 (454)
Q Consensus 81 ~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~l~~~~~ 132 (454)
+..|-+...|.-.+.+.++.+++..|+.-+-+-=.+|..+..+|..+.-+.|
T Consensus 54 ~~fGRvYAAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~~P 105 (107)
T PF02694_consen 54 AAFGRVYAAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILFAP 105 (107)
T ss_pred ccchhHHHHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEecC
Confidence 5568889999999999999999999998887777777777777777666554
No 315
>PRK10263 DNA translocase FtsK; Provisional
Probab=49.55 E-value=2.6e+02 Score=31.22 Aligned_cols=33 Identities=12% Similarity=0.073 Sum_probs=18.1
Q ss_pred HHHHHHHHHHHHHhccCCchhHHHHHHHHHHHH
Q 012902 407 LAGVFGTAATGYILQHGSWDDVFKVSVGLYLVG 439 (454)
Q Consensus 407 ~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~ 439 (454)
.|+++|..+...+....|.....++..++.+++
T Consensus 142 gGGIIG~lLs~lL~~LfG~vGa~LILLlllLIG 174 (1355)
T PRK10263 142 SGGVIGSLLSTTLQPLLHSSGGTIALLCVWAAG 174 (1355)
T ss_pred ccchHHHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 466677666666666655544444444433333
No 316
>PRK13629 threonine/serine transporter TdcC; Provisional
Probab=48.79 E-value=2.6e+02 Score=27.10 Aligned_cols=43 Identities=14% Similarity=0.002 Sum_probs=29.1
Q ss_pred ccchHHHHHHHHhhHHHHHHhHHhHHHHHhhccCcchhHHHHhHHHHH
Q 012902 167 VAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTV 214 (454)
Q Consensus 167 ~~~rg~~~~~~~~~~~~g~~ig~~l~~~l~~~~gwr~~f~~~~~~~~~ 214 (454)
+++.+..+++.+++.+.|...-|...+. +|-++..+..+++..
T Consensus 19 ~~d~~W~l~l~GTAIGAGmLfLPI~~g~-----~Gf~p~lillll~~p 61 (443)
T PRK13629 19 KSDTTWTLGLFGTAIGAGVLFFPIRAGF-----GGLIPILLMLVLAYP 61 (443)
T ss_pred cccchHHHHHHHHHHhHHHHHHHHHHhc-----chHHHHHHHHHHHHH
Confidence 5667888999999988888888876654 344555544444433
No 317
>PF11368 DUF3169: Protein of unknown function (DUF3169); InterPro: IPR021509 Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently there is no known function.
Probab=48.71 E-value=1.9e+02 Score=25.45 Aligned_cols=25 Identities=24% Similarity=0.313 Sum_probs=14.5
Q ss_pred HHHHHHHHhhHHHHHHhHHhHHHHH
Q 012902 171 SRSLALVYSGMYLGSVTGLAFSPFL 195 (454)
Q Consensus 171 g~~~~~~~~~~~~g~~ig~~l~~~l 195 (454)
.+.....-.+.-+|+++|...+..-
T Consensus 9 ~~~~~~illg~~iGg~~G~~~~~~~ 33 (248)
T PF11368_consen 9 LRFLLLILLGGLIGGFIGFFIGRIG 33 (248)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4555556666666666666554443
No 318
>COG1288 Predicted membrane protein [Function unknown]
Probab=44.93 E-value=2.9e+02 Score=26.58 Aligned_cols=25 Identities=16% Similarity=0.426 Sum_probs=16.7
Q ss_pred HhhccCcchhHHHHhHHHHHHHHHH
Q 012902 195 LIHRFGWPSVFYSFGSLGTVWFTVW 219 (454)
Q Consensus 195 l~~~~gwr~~f~~~~~~~~~~~~~~ 219 (454)
+.+..+||...|+...+..+.-+..
T Consensus 212 ~~sG~~~Riv~~v~~~~~~i~y~~~ 236 (481)
T COG1288 212 FLSGMGLRIVVWVVFTLISIIYVYW 236 (481)
T ss_pred ccccchHHHHHHHHHHHHHHHHHHH
Confidence 4456789999988776655544433
No 319
>PRK02237 hypothetical protein; Provisional
Probab=44.37 E-value=67 Score=23.81 Aligned_cols=52 Identities=15% Similarity=0.018 Sum_probs=42.3
Q ss_pred hhHHHHHHHHHHHHHHhhhhhhhhhccccchHHHHHHHHHHHHHHhhhhhcc
Q 012902 81 ATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAA 132 (454)
Q Consensus 81 ~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~l~~~~~ 132 (454)
+..|-+...|.-.+.+.++.+++..|+.-.-+-=.+|..+..+|..+.-+.|
T Consensus 56 ~~~GRvYAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~~p 107 (109)
T PRK02237 56 AAFGRVYAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMYAP 107 (109)
T ss_pred hhhhhHHHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHheecC
Confidence 4478899999999999999999999998877776677777777776665554
No 320
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=44.12 E-value=2.4e+02 Score=25.36 Aligned_cols=31 Identities=13% Similarity=0.180 Sum_probs=20.0
Q ss_pred hHhhcCcchHHHHHHHHHHHHHHHHHHhhHH
Q 012902 257 GLILSKPPVWALIVSHFCHNWGTFILLTWMP 287 (454)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (454)
++..|+|+.+............+.....|.|
T Consensus 63 ~~~~~~p~~~~~~~l~a~li~~nW~lfiWAv 93 (293)
T COG2962 63 KQLLKQPKTLLMLALTALLIGLNWWLFIWAV 93 (293)
T ss_pred HHHHhCcHHHHHHHHHHHHHHHHHHHhheec
Confidence 3467788777766666666556656655555
No 321
>PF03741 TerC: Integral membrane protein TerC family; InterPro: IPR005496 A family containining a number of integral membrane proteins is named after TerC protein. TerC has been implicated in resistance to tellurium, and may be involved in efflux of tellurium ions. The tellurite-resistant Escherichia coli strain KL53 was found during testing of a group of clinical isolates for antibiotic and heavy metal ion resistance []. The determinant of the strain's tellurite resistance was located on a large conjugative plasmid, and analyses showed the genes terB, terC, terD and terE were essential for conservation of this resistance. Members of this family contain a number of conserved aspartates which may be involved in metal ion binding.; GO: 0016021 integral to membrane
Probab=44.11 E-value=1.9e+02 Score=24.10 Aligned_cols=55 Identities=13% Similarity=0.199 Sum_probs=32.1
Q ss_pred chhhhhHHHhhhcCccchHHHHHHHHhhHHHHHHhHHhHHHHHhhccCcchhHHHHh
Q 012902 153 AMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFG 209 (454)
Q Consensus 153 ~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~ig~~l~~~l~~~~gwr~~f~~~~ 209 (454)
-.....+.+.+..|+++|.++.-+--.+..+--.+.-..+.++.+. |++..++.|
T Consensus 13 DN~~vi~~~~~~lp~~~r~kal~~Gi~~A~~lR~~~i~~~~~ll~~--~~~i~~igG 67 (183)
T PF03741_consen 13 DNAFVIAMIFRKLPPEQRRKALFWGIIGAIVLRIIFIFLASWLLSI--FPWILLIGG 67 (183)
T ss_pred hHHHHHHHHHhCCCHHHhhhhHHHhHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHH
Confidence 4455567778889887777665444333334445555566677664 344444433
No 322
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=44.06 E-value=62 Score=25.90 Aligned_cols=50 Identities=24% Similarity=0.185 Sum_probs=35.3
Q ss_pred cHHHHHHHHHHHHhhcccchhhhhHHHhhhcCccchHHHHHHHHhhHHHHHHh
Q 012902 135 GLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVT 187 (454)
Q Consensus 135 ~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~i 187 (454)
++..+++.-.+.|+| .....+.+++--..+++.|..+|+-.+-.+++-+.
T Consensus 96 ~~~~~~~S~~~Fg~g---llGisYGilSaSWD~~r~GSllG~~e~~~N~~r~~ 145 (153)
T PF11947_consen 96 PWAVLLVSLVFFGLG---LLGISYGILSASWDPEREGSLLGWEEFKRNWGRMW 145 (153)
T ss_pred chHHHHHHHHHHHHH---HHhhhhhhcccccCCCCCCCcccHHHHHHhHHHHH
Confidence 455566666666665 33455677777777888999999998888887654
No 323
>PF07760 DUF1616: Protein of unknown function (DUF1616); InterPro: IPR011674 This is a group of sequences from hypothetical archaeal proteins. The region in question is approximately 330 amino acid residues long.
Probab=42.60 E-value=2.5e+02 Score=25.40 Aligned_cols=56 Identities=13% Similarity=0.095 Sum_probs=34.4
Q ss_pred HHHHHHHHHhhcccchhhhhHHHhhhcCccchHHHHHHHHhhHHHHHHhHHhHHHHH
Q 012902 139 LLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFL 195 (454)
Q Consensus 139 l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~ig~~l~~~l 195 (454)
--..|.+.|+-. ..+.+++++++-.+|++++--..--.....+++.++-|.+|-.+
T Consensus 22 ~~~lr~~~g~~~-vlf~PGy~l~~~lfp~~~~l~~~er~~ls~glSi~~~~~~g~~l 77 (287)
T PF07760_consen 22 IPPLRVILGFPF-VLFLPGYALVAALFPRKHDLDGIERLALSVGLSIAIVPLIGLLL 77 (287)
T ss_pred hhHHHHHHHHHH-HHHhccHHHHHHHccCcCCCcHHHHHHHHHHHHHHHHHHHHHHH
Confidence 446688888875 35577889999999865543333333444455555555554443
No 324
>PF03596 Cad: Cadmium resistance transporter; InterPro: IPR004676 These proteins are members of the Cadmium Resistance (CadD) Family. To date, this family of proteins has only been found in Gram-positive bacteria. The CadD family includes two close orthologues in two Staphylococcus species that have been reported to function in cadmium resistance, and another staphylococcal protein that has been reported to possibly function in quaternary ammonium ion export.
Probab=42.41 E-value=2.1e+02 Score=24.07 Aligned_cols=10 Identities=10% Similarity=0.484 Sum_probs=5.4
Q ss_pred HHhhHHHHHH
Q 012902 282 LLTWMPTYYN 291 (454)
Q Consensus 282 ~~~~~~~~l~ 291 (454)
+..|.|.+.+
T Consensus 113 igIYiP~Fa~ 122 (191)
T PF03596_consen 113 IGIYIPLFAS 122 (191)
T ss_pred EEEeehhhhc
Confidence 3456676643
No 325
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=39.81 E-value=68 Score=23.74 Aligned_cols=34 Identities=15% Similarity=0.132 Sum_probs=29.3
Q ss_pred ccchhhHhHHHHHHHHHHHHHHHHHhhhhhhcCc
Q 012902 298 LTESGLFCVLPWLTMAFSANLGGWIADTLVSKGL 331 (454)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~ 331 (454)
+...|-.++.++...++.++..++..|+..+.+-
T Consensus 53 p~~fGRvYAAYGGvfI~~Sl~W~w~vdg~~Pd~~ 86 (107)
T PF02694_consen 53 PAAFGRVYAAYGGVFIVASLLWGWLVDGVRPDRW 86 (107)
T ss_pred cccchhHHHHhhhhHHHHHHHHHhhhcCcCCChH
Confidence 3567888999999999999999999999887743
No 326
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=38.19 E-value=4.1e+02 Score=26.30 Aligned_cols=49 Identities=8% Similarity=0.096 Sum_probs=35.3
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHH
Q 012902 392 RYSGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGT 440 (454)
Q Consensus 392 ~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~ 440 (454)
++....+|-.+...++...+-..+.+.+.+..||.....+.-++.+++.
T Consensus 315 ~~ysafmG~~~~~tGivtii~~~l~~~iir~~GW~~~AlitPiv~lit~ 363 (491)
T PF03219_consen 315 NDYSAFMGKFSSWTGIVTIIMMFLSSNIIRRFGWRTAALITPIVILITG 363 (491)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhHHHHHHHH
Confidence 4677777777777777777777888899999999877666554444433
No 327
>PF04226 Transgly_assoc: Transglycosylase associated protein; InterPro: IPR007341 This bacterial protein is predicted to be an integral membrane protein. Some family members have been annotated as transglycosylase-associated proteins, but no experimental evidence is provided. This family was annotated based on the information in P76011 from SWISSPROT.; GO: 0016021 integral to membrane
Probab=37.99 E-value=98 Score=19.09 Aligned_cols=38 Identities=13% Similarity=0.046 Sum_probs=17.2
Q ss_pred HHHhHHhHHHHHhhccCcchhHHHHhHHHHHHHHHHHH
Q 012902 184 GSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLS 221 (454)
Q Consensus 184 g~~ig~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~ 221 (454)
|+.+|..+.+.+....++.+.=++.+.+..+.++..+.
T Consensus 7 Ga~vGg~l~~~lg~~~~~~~~~~i~aviGAiill~i~~ 44 (48)
T PF04226_consen 7 GAFVGGWLFGLLGINGGGSWGSFIVAVIGAIILLFIYR 44 (48)
T ss_pred HHHHHHHHHHHhcccCCchHHHHHHHHHHHHHHHHHHH
Confidence 44444444333332233455555556555555444433
No 328
>PF11299 DUF3100: Protein of unknown function (DUF3100); InterPro: IPR021450 Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently no function is known.
Probab=37.65 E-value=53 Score=28.23 Aligned_cols=54 Identities=31% Similarity=0.425 Sum_probs=39.8
Q ss_pred HHHHHHHhhcccchhhhhHHHhhhcCccchHHHHHHHHhhHHHHHHhHHhHHHHH
Q 012902 141 VVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFL 195 (454)
Q Consensus 141 ~~r~l~G~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~ig~~l~~~l 195 (454)
..-.-.|+|+|....++..-+.+.+| +......++-.+.+-+..+.|-...-++
T Consensus 176 ALAMasGvGSgSMMaAa~~aL~~~~P-~~a~~i~A~AaaSNllt~~~G~Y~~ifi 229 (241)
T PF11299_consen 176 ALAMASGVGSGSMMAAASGALAAAYP-EMADQILAFAAASNLLTSVTGLYMSIFI 229 (241)
T ss_pred HHHHHcCCcHHHHHHHHHHHHHHHCc-chHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33445788999899999999999996 6777778877777777777665554443
No 329
>PF03706 UPF0104: Uncharacterised protein family (UPF0104); InterPro: IPR022791 This family of proteins are integral membrane proteins. These proteins are uncharacterised but contain a conserved PG motif. Some members of this family are annotated as dolichol-P-glucose synthetase and contain a PF00535 from PFAM domain. This entry also contains proteins of unknown function that are involved in the addition of lysine to phosphatidylglycerol (lysylphosphatidylglycerol synthetase, L-PG synthase). L-PG synthase produces lysyl-phosphatidylglycerol (L-PG), the major component of the bacterial membrane and responsible for its positive charge. L-PG synthesis contributes to bacterial virulence as it is involved in the cationic antimicrobial peptides (CAMP) resistance mechanism of the host's immune system (defensins, cathelicidins) and of the competing microorganisms (bacteriocins).
Probab=37.57 E-value=3e+02 Score=24.57 Aligned_cols=50 Identities=14% Similarity=0.022 Sum_probs=31.9
Q ss_pred CCChhhHHHHHHHHHHHHHHhhhhhhhhhccccchHHHHHHHHHHHHHHh
Q 012902 77 NWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATA 126 (454)
Q Consensus 77 ~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~ 126 (454)
+.+.........+..+...+-..-+-.+.++.|.|..+.-..-....+..
T Consensus 23 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~ 72 (294)
T PF03706_consen 23 SANPWWLLLALLLSLLSYVLRALRWRLLLRRLGHRISFRDALRISFIGFF 72 (294)
T ss_pred hCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHH
Confidence 45566666666677777777777777788877766555544444444433
No 330
>PRK10263 DNA translocase FtsK; Provisional
Probab=37.09 E-value=1.7e+02 Score=32.55 Aligned_cols=17 Identities=29% Similarity=0.288 Sum_probs=7.5
Q ss_pred HHHhHHhHHHHHhhccC
Q 012902 184 GSVTGLAFSPFLIHRFG 200 (454)
Q Consensus 184 g~~ig~~l~~~l~~~~g 200 (454)
|+++|..++..+...+|
T Consensus 143 GGIIG~lLs~lL~~LfG 159 (1355)
T PRK10263 143 GGVIGSLLSTTLQPLLH 159 (1355)
T ss_pred cchHHHHHHHHHHHHHh
Confidence 44444444444444333
No 331
>PRK10599 calcium/sodium:proton antiporter; Provisional
Probab=36.34 E-value=1.7e+02 Score=27.43 Aligned_cols=60 Identities=17% Similarity=0.142 Sum_probs=35.7
Q ss_pred chhhhhcchhhhhhcCCChhhHHHHHHHHHHHHH---HhhhhhhhhhccccchHHHHHHHHHHHHH
Q 012902 62 QVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYL---LTQIAGGIWADTVGGKAVLGFGVVWWSIA 124 (454)
Q Consensus 62 ~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~---~~~~~~g~l~dr~Grr~~~~~~~~~~~~~ 124 (454)
.-.....+....+++|.++...|.+.. .++.. +.+.-. ..-||..+---+..|..+..++
T Consensus 238 Ae~lv~sIe~~v~~~Glp~afiGvIIa--iv~~apE~~tAV~a-A~kNkmq~slnialGSsLq~il 300 (366)
T PRK10599 238 TKMNASPLETLLTSMNAPVAFTGFLVA--LLILSPEGLGALKA-VLNNQVQRAMNLFFGSVLATIS 300 (366)
T ss_pred HHHhHhhHHHHHHhcCCCHHHHHHHHH--HHHcchhHHHHHHH-HHcCchHHHHHHHHHHHHHHHH
Confidence 445566777888899999999998763 33222 333332 2456665555555555444433
No 332
>PRK02237 hypothetical protein; Provisional
Probab=35.31 E-value=1.2e+02 Score=22.50 Aligned_cols=33 Identities=12% Similarity=0.012 Sum_probs=28.6
Q ss_pred cchhhHhHHHHHHHHHHHHHHHHHhhhhhhcCc
Q 012902 299 TESGLFCVLPWLTMAFSANLGGWIADTLVSKGL 331 (454)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~ 331 (454)
...|-.++.++...++.++..++..|+..+.+-
T Consensus 56 ~~~GRvYAAYGGvyI~~Sl~W~w~vdg~~Pd~~ 88 (109)
T PRK02237 56 AAFGRVYAAYGGVYVAGSLLWLWVVDGVRPDRW 88 (109)
T ss_pred hhhhhHHHHhhhHHHHHHHHHHHHhcCcCCChh
Confidence 347888999999999999999999999877643
No 333
>PF12273 RCR: Chitin synthesis regulation, resistance to Congo red; InterPro: IPR020999 RCR proteins are ER membrane proteins that regulate chitin deposition in fungal cell walls. Although chitin, a linear polymer of beta-1,4-linked N-acetylglucosamine, constitutes only 2% of the cell wall it plays a vital role in the overall protection of the cell wall against stress, noxious chemicals and osmotic pressure changes. Congo red is a cell wall-disrupting benzidine-type dye extensively used in many cell wall mutant studies that specifically targets chitin in yeast cells and inhibits growth. RCR proteins render the yeasts resistant to Congo red by diminishing the content of chitin in the cell wall []. RCR proteins are probably regulating chitin synthase III interact directly with ubiquitin ligase Rsp5, and the VPEY motif is necessary for this, via interaction with the WW domains of Rsp5 [].
Probab=34.14 E-value=21 Score=27.70 Aligned_cols=18 Identities=11% Similarity=0.187 Sum_probs=9.4
Q ss_pred chhHHHHhHHHHHHHHHH
Q 012902 202 PSVFYSFGSLGTVWFTVW 219 (454)
Q Consensus 202 r~~f~~~~~~~~~~~~~~ 219 (454)
||++++..++.++++++.
T Consensus 1 RW~l~~iii~~i~l~~~~ 18 (130)
T PF12273_consen 1 RWVLFAIIIVAILLFLFL 18 (130)
T ss_pred CeeeHHHHHHHHHHHHHH
Confidence 566666555544444433
No 334
>COG4769 Predicted membrane protein [Function unknown]
Probab=33.31 E-value=39 Score=27.15 Aligned_cols=53 Identities=11% Similarity=0.027 Sum_probs=36.3
Q ss_pred HHHHHHHHhhhhhhhhhccccchHHHHHHHHHHHHHHhhhhhcccccHHHHHHHHHHHHhh
Q 012902 89 SFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMGIG 149 (454)
Q Consensus 89 ~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~r~l~G~~ 149 (454)
++.+..++.+...-++..++|.|..-.+|.-.+ -++.+ |..++.+.+++.|-.
T Consensus 81 l~sfaG~i~S~L~m~~l~~f~~k~~S~lgiS~m------GaF~h--Nl~QLivas~Lv~~~ 133 (181)
T COG4769 81 LYSFAGAILSTLFMYFLYQFGPKYLSLLGISVM------GAFTH--NLGQLIVASFLVFTT 133 (181)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCceEeeeehhhH------HHHHH--hHHHHHHHHHHHhcc
Confidence 445555666666777888899887754444322 36777 888999888887644
No 335
>COG3559 TnrB3 Putative exporter of polyketide antibiotics [Cell envelope biogenesis, outer membrane]
Probab=33.11 E-value=4.5e+02 Score=25.30 Aligned_cols=65 Identities=8% Similarity=-0.021 Sum_probs=32.5
Q ss_pred cCcchHHHHHHHHHHHHHHHHHHhhHHHHHHHH----------hCCcccchhhHhHHHHHHHHHHHHHHHHHhhh
Q 012902 261 SKPPVWALIVSHFCHNWGTFILLTWMPTYYNQV----------LHFNLTESGLFCVLPWLTMAFSANLGGWIADT 325 (454)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~----------~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr 325 (454)
.+..+..-.+..+.....+....--+-+++++. .+....+.+.+...+.+.+++.+...-.+.-|
T Consensus 296 ~Rg~lI~W~v~~fllglvygs~fg~l~~fL~~n~avrqave~~e~ag~le~~Flv~lfsIisil~a~~~V~~vlk 370 (536)
T COG3559 296 NRGSLILWTVGLFLLGLVYGSVFGGLGDFLGDNTAVRQAVERMEGAGALEQAFLVLLFSIISILAAAFAVSLVLK 370 (536)
T ss_pred ccCccHHHHHHHHHHHHHHHHHhhhhhhhhcCcHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344555555555555555555444443333321 23334445566666666666666554444433
No 336
>PF13386 DsbD_2: Cytochrome C biogenesis protein transmembrane region
Probab=31.62 E-value=3.1e+02 Score=23.00 Aligned_cols=35 Identities=17% Similarity=0.036 Sum_probs=27.5
Q ss_pred CCcccchhhHhHHHHHHHHHHHHHHHHHhhhhhhc
Q 012902 295 HFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSK 329 (454)
Q Consensus 295 g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~ 329 (454)
.-|+.+....+..++++..+.-+..+...++.+++
T Consensus 146 s~s~~~G~l~m~~FgLGT~p~ll~~~~~~~~l~~~ 180 (199)
T PF13386_consen 146 SGSPLYGALLMLAFGLGTLPALLLAGLLAGKLSRR 180 (199)
T ss_pred cCChHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Confidence 44777888888999999988888888777776654
No 337
>COG1268 BioY Uncharacterized conserved protein [General function prediction only]
Probab=31.33 E-value=1.1e+02 Score=25.47 Aligned_cols=24 Identities=13% Similarity=0.473 Sum_probs=20.5
Q ss_pred HHHHHHHHHHhhhhhhhhhccccc
Q 012902 87 QSSFFWGYLLTQIAGGIWADTVGG 110 (454)
Q Consensus 87 ~s~~~~~~~~~~~~~g~l~dr~Gr 110 (454)
+.-|.+++.+++.+.|++.||.-+
T Consensus 88 TgGyL~gfi~aa~l~G~l~~k~~~ 111 (184)
T COG1268 88 TGGYLIGFIIAAFLIGLLAEKIRK 111 (184)
T ss_pred chhHHHHHHHHHHHHHHHHHhhhc
Confidence 446788899999999999999885
No 338
>COG3619 Predicted membrane protein [Function unknown]
Probab=30.21 E-value=3.7e+02 Score=23.34 Aligned_cols=122 Identities=16% Similarity=0.154 Sum_probs=55.4
Q ss_pred ChhhHHHHHHHHHHHHHHhhhhhhhhhccccc-hH-HH-HHHHHHHHHHHhhhhhcccc--cHHHHHHHHHHHH------
Q 012902 79 NPATVGLIQSSFFWGYLLTQIAGGIWADTVGG-KA-VL-GFGVVWWSIATALTPVAAKL--GLPFLLVVRVFMG------ 147 (454)
Q Consensus 79 s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Gr-r~-~~-~~~~~~~~~~~~l~~~~~~~--~~~~l~~~r~l~G------ 147 (454)
++...........+...++......+..|..| .. .+ ....++........++.+.. +.......-+..|
T Consensus 53 ~~~~~a~~~~~pii~Fv~Gv~~~~~~~r~~~~~~~~~l~~~~~ll~~~v~~~~~~~p~~~~~~~~~il~~f~mg~Qnasf 132 (226)
T COG3619 53 GDAALAVLLLLPILAFVLGVAAAELISRRATRSFIPVLLLVSLLLALIALLALGFIPESSPDFVAVILVAFAMGIQNASF 132 (226)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHH
Confidence 34555666667777777776555555555544 12 22 22333333333333432210 3333333333333
Q ss_pred -----hhcccchhhh-----hHHHhhhcCccc-hHHHHHHHHhhHHHHHHhHHhHHHHHhhccC
Q 012902 148 -----IGEGVAMPAM-----NNILSKWVPVAE-RSRSLALVYSGMYLGSVTGLAFSPFLIHRFG 200 (454)
Q Consensus 148 -----~~~g~~~~~~-----~~~i~~~~~~~~-rg~~~~~~~~~~~~g~~ig~~l~~~l~~~~g 200 (454)
...+..+... ..-+.++...|+ .-.--.......-++.++|...++.+...+|
T Consensus 133 ~k~~g~~~~~t~~TGnl~~~~~~l~~~l~~k~~~~~~~~~~~~~~il~f~~GAi~g~ll~~~~g 196 (226)
T COG3619 133 RKVGGAPYGTTYVTGNLKSAGRGLGRYLSGKDKEKLRDWLIYLSLILSFIVGAICGALLTLFFG 196 (226)
T ss_pred HHhcCccccchhhhhhHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3333222221 122445554332 2223334444455666777777777666544
No 339
>PF10183 ESSS: ESSS subunit of NADH:ubiquinone oxidoreductase (complex I) ; InterPro: IPR019329 NADH:ubiquinone oxidoreductase (complex I) (1.6.5.3 from EC) is a respiratory-chain enzyme that catalyses the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane (NADH + ubiquinone = NAD+ + ubiquinol) []. Complex I is a major source of reactive oxygen species (ROS) that are predominantly formed by electron transfer from FMNH(2). Complex I is found in bacteria, cyanobacteria (as a NADH-plastoquinone oxidoreductase), archaea [], mitochondira, and in the hydrogenosome, a mitochondria-derived organelle. In general, the bacterial complex consists of 14 different subunits, while the mitochondrial complex contains homologues to these subunits in addition to approximately 31 additional proteins []. Mitochondrial complex I, which is located in the inner mitochondrial membrane, is the largest multimeric respiratory enzyme in the mitochondria, consisting of more than 40 subunits, one FMN co-factor and eight FeS clusters []. The assembly of mitochondrial complex I is an intricate process that requires the cooperation of the nuclear and mitochondrial genomes [, ]. Mitochondrial complex I can cycle between active and deactive forms that can be distinguished by the reactivity towards divalent cations and thiol-reactive agents. All redox prosthetic groups reside in the peripheral arm of the L-shaped structure. The NADH oxidation domain harbouring the FMN cofactor is connected via a chain of iron-sulphur clusters to the ubiquinone reduction site that is located in a large pocket formed by the PSST and 49kDa subunits of complex I []. This entry represents the ESSS subunit from mitochondrial NADH:ubiquinone oxidoreductase (complex I). It carries mitochondrial import sequences [].
Probab=29.11 E-value=67 Score=23.85 Aligned_cols=31 Identities=23% Similarity=0.203 Sum_probs=23.6
Q ss_pred hccCcchhHHHHhHHHHHHHHHHHHhcCCCC
Q 012902 197 HRFGWPSVFYSFGSLGTVWFTVWLSKAHSSP 227 (454)
Q Consensus 197 ~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~ 227 (454)
+..+|+.+|++...++++.+.+.+...|+..
T Consensus 55 d~e~we~~~f~~~~~~~v~~~~~~~y~PD~~ 85 (105)
T PF10183_consen 55 DWEGWELPFFFGFSGSLVFGGVFLAYKPDTS 85 (105)
T ss_pred hHhhhHHHHHHHHHHHHHHHHHHHHcCCCCC
Confidence 4568999999988788777777777777654
No 340
>PF01925 TauE: Sulfite exporter TauE/SafE; InterPro: IPR002781 This family is found in integral membrane proteins of prokaryotes which are uncharacterised.; GO: 0016021 integral to membrane
Probab=28.01 E-value=3.9e+02 Score=23.00 Aligned_cols=19 Identities=16% Similarity=0.520 Sum_probs=10.4
Q ss_pred HHHHHhHHhHHHHHhhccC
Q 012902 182 YLGSVTGLAFSPFLIHRFG 200 (454)
Q Consensus 182 ~~g~~ig~~l~~~l~~~~g 200 (454)
..+.++|..++.++..+.+
T Consensus 70 ~~~~~~g~~iG~~l~~~l~ 88 (240)
T PF01925_consen 70 IIGALIGVVIGAWLLSLLP 88 (240)
T ss_pred hhHhHHHHHHHHhhhcchh
Confidence 3455555566666655443
No 341
>PF11151 DUF2929: Protein of unknown function (DUF2929); InterPro: IPR021324 This family of proteins with unknown function appears to be restricted to Firmicutes.
Probab=27.92 E-value=1.7e+02 Score=18.85 Aligned_cols=40 Identities=15% Similarity=0.128 Sum_probs=23.1
Q ss_pred HHHHHhHHhHHHHHhhccCcchhHHHHhHHHHHHHHHHHH
Q 012902 182 YLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLS 221 (454)
Q Consensus 182 ~~g~~ig~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~ 221 (454)
-+|.++|...+..-...++++....+..+.+++...+...
T Consensus 12 il~~vvgyI~ssL~~~~~n~~~~~Ii~vi~~i~~~~~~~~ 51 (57)
T PF11151_consen 12 ILGEVVGYIGSSLTGVTYNFTTAAIIAVIFGIIVANIIAV 51 (57)
T ss_pred HHHHHHHHHHHHHhCCCCChHHHHHHHHHHHHHHHHHHHH
Confidence 4566666655555444566666666666666655444443
No 342
>PF02632 BioY: BioY family; InterPro: IPR003784 BioMNY proteins are considered to constitute tripartite biotin transporters in prokaryotes. One-third of the widespread bioY genes are linked to bioMN. Many bioY genes are located at loci encoding biotin biosynthesis, while others are unlinked to biotin metabolic or transport genes. BioY is a high-capacity transporter that is converted to a high-affinity system in the presence of BioMN. BioMNY-mediated biotin uptake is severely impaired by the replacement of the Walker A lysine residue in BioM, demonstrating the dependency of high-affinity transport on a functional ATPase [].
Probab=27.69 E-value=1.2e+02 Score=24.24 Aligned_cols=42 Identities=10% Similarity=0.175 Sum_probs=28.1
Q ss_pred HHHHHHHHHHhhhhhhhhhccccchHHHHHHHHHHHHHHhhh
Q 012902 87 QSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALT 128 (454)
Q Consensus 87 ~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~l~ 128 (454)
+.-|.+++.+.+.+.|++.||..+++..........++...+
T Consensus 59 TgGyl~gf~~~a~i~g~~~~~~~~~~~~~~~~~~~~~g~~ii 100 (148)
T PF02632_consen 59 TGGYLLGFPLAALIIGLLAERLKRSRSFLRLILAMLVGLLII 100 (148)
T ss_pred CChHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHH
Confidence 346788999999999999999887643333333333444433
No 343
>COG2233 UraA Xanthine/uracil permeases [Nucleotide transport and metabolism]
Probab=27.67 E-value=3.4e+02 Score=26.37 Aligned_cols=126 Identities=11% Similarity=0.047 Sum_probs=0.0
Q ss_pred cccccchHHHHHHHHHHHHHHHHhhhchhhhhcchhhhhhcCCChhhHHHHHHHHHHHHHHhhhhhhhhhccccchHHHH
Q 012902 36 KLKHNSYKQIISLCVGNFEQIFIVFGQVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLG 115 (454)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~ 115 (454)
....+....-..+..+... +..+......|.+ +..++|++.++...+.+.-.+...++.++--....+.|-|-...
T Consensus 8 ~~~~~~~~~~~~~lglQH~--lamfg~~V~VPli--vg~a~~l~~~~~~~Lis~~l~~~GiaTllq~~~~~~~g~~lP~~ 83 (451)
T COG2233 8 LVDERLPLGKLLLLGLQHL--LAMFGATVLVPLL--VGLALGLSAEDTAYLISADLLASGIGTLLQLLGTGPGGSGLPSY 83 (451)
T ss_pred cccccCChHHHHHHHHHHH--HHHHhcchHhhHH--hccCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhccCcccCCCee
Q ss_pred HHHHHHHHHHhhhhhc---ccccHHHHHHHHHHHHhhcccchhhhhHHHhhhcCc
Q 012902 116 FGVVWWSIATALTPVA---AKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPV 167 (454)
Q Consensus 116 ~~~~~~~~~~~l~~~~---~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~ 167 (454)
.|.-...++....... . .....+.+-+..|+..-...+.....+.+.+||
T Consensus 84 lG~sFafi~p~i~~~~~~g~--~~~~~~G~ii~ag~~~~li~~~~~~~l~rlfPP 136 (451)
T COG2233 84 LGSSFAFVAPMIAIGGTTGD--GIAALLGGIIAAGLVYFLISPIVKIRLARLFPP 136 (451)
T ss_pred EechHHHHHHHHHHHhccCC--chHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
No 344
>TIGR01478 STEVOR variant surface antigen, stevor family. This model represents the stevor branch of the rifin/stevor family (pfam02009) of predicted variant surface antigens as found in Plasmodium falciparum. This model is based on a set of stevor sequences kindly provided by Matt Berriman from the Sanger Center. This is a global model and assesses a penalty for incomplete sequence. Additional fragmentary sequences may be found with the fragment model and a cutoff of 8 bits.
Probab=27.11 E-value=96 Score=27.57 Aligned_cols=29 Identities=14% Similarity=-0.016 Sum_probs=16.9
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHhccCCc
Q 012902 423 GSWDDVFKVSVGLYLVGTAVWNLFSTGEK 451 (454)
Q Consensus 423 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 451 (454)
..|..+-++..++.++..+++.++.|+|+
T Consensus 259 ~Pcgiaalvllil~vvliiLYiWlyrrRK 287 (295)
T TIGR01478 259 LPYGIAALVLIILTVVLIILYIWLYRRRK 287 (295)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 45555555555666666666666655554
No 345
>PTZ00370 STEVOR; Provisional
Probab=27.10 E-value=94 Score=27.69 Aligned_cols=29 Identities=14% Similarity=-0.030 Sum_probs=17.2
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHhccCCc
Q 012902 423 GSWDDVFKVSVGLYLVGTAVWNLFSTGEK 451 (454)
Q Consensus 423 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 451 (454)
..|..+-++..++.++..+++.++.|+|+
T Consensus 255 ~Pygiaalvllil~vvliilYiwlyrrRK 283 (296)
T PTZ00370 255 YPYGIAALVLLILAVVLIILYIWLYRRRK 283 (296)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 45555555556666666666666655554
No 346
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=26.25 E-value=2.7e+02 Score=20.51 Aligned_cols=28 Identities=14% Similarity=0.230 Sum_probs=17.9
Q ss_pred HHHHHhhHHHHHHhHHhHHHHHhhccCc
Q 012902 174 LALVYSGMYLGSVTGLAFSPFLIHRFGW 201 (454)
Q Consensus 174 ~~~~~~~~~~g~~ig~~l~~~l~~~~gw 201 (454)
+|.......+..++|..+|-++-+.++-
T Consensus 45 ~g~IG~~~v~pil~G~~lG~WLD~~~~t 72 (100)
T TIGR02230 45 FGLIGWSVAIPTLLGVAVGIWLDRHYPS 72 (100)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCC
Confidence 4445555556667777777777777653
No 347
>PLN02332 membrane bound O-acyl transferase (MBOAT) family protein
Probab=25.30 E-value=5.1e+02 Score=25.45 Aligned_cols=30 Identities=10% Similarity=0.057 Sum_probs=20.1
Q ss_pred cchHHHHHHHHHHHHHHhhhhhcccccHHHHH
Q 012902 109 GGKAVLGFGVVWWSIATALTPVAAKLGLPFLL 140 (454)
Q Consensus 109 Grr~~~~~~~~~~~~~~~l~~~~~~~~~~~l~ 140 (454)
|.|+...-..+.+.++.+..++.+ ++....
T Consensus 339 ~~~~~~~~~~~t~~~sa~WHG~~~--gYyl~f 368 (465)
T PLN02332 339 GKKPGFFQLLATQTVSAVWHGLYP--GYILFF 368 (465)
T ss_pred CcchhHHHHHHHHHHHHHHhcCCc--HHHHHH
Confidence 445555555667778888899888 664443
No 348
>KOG4830 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=25.25 E-value=2e+02 Score=25.58 Aligned_cols=96 Identities=13% Similarity=0.250 Sum_probs=54.9
Q ss_pred hhhhcCCChhhHHHHHHHHHHHHHHhhhhhhhh-hccccchHHHHHHHHHHHHHHhhhhhcccccHH-HHHHHHHHHHhh
Q 012902 72 MSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIW-ADTVGGKAVLGFGVVWWSIATALTPVAAKLGLP-FLLVVRVFMGIG 149 (454)
Q Consensus 72 i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l-~dr~Grr~~~~~~~~~~~~~~~l~~~~~~~~~~-~l~~~r~l~G~~ 149 (454)
+.+|++.+.+...++-.+..+.....+.+-.-. -++-..|.-...|.+++..+....-+-+. ++- -+++..+..|++
T Consensus 228 viddlqm~qsakAllP~v~Yl~SF~VS~v~~eipwngkrlKayYsaGgiiwifcga~ilLlpr-~i~symyAisvfIGIA 306 (412)
T KOG4830|consen 228 VIDDLQMEQSAKALLPMVAYLSSFSVSMVNSEIPWNGKRLKAYYSAGGIIWIFCGAVILLLPR-GIKSYMYAISVFIGIA 306 (412)
T ss_pred EeehhhHHHHHhhhhHHHHHHhhhhHHhhcccCCcCcceeeeeeecccHHHHHhhhheeeccc-chHHHHHHHHHHHHHH
Confidence 456777777777777666666555544433211 11112223355566665555554444432 332 245557889999
Q ss_pred cccchhhhhHHHhhhcCcc
Q 012902 150 EGVAMPAMNNILSKWVPVA 168 (454)
Q Consensus 150 ~g~~~~~~~~~i~~~~~~~ 168 (454)
.+........+-++...++
T Consensus 307 nAimlvtslsitavli~~~ 325 (412)
T KOG4830|consen 307 NAIMLVTSLSITAVLINKN 325 (412)
T ss_pred HHHHHHHHHHHHHHHhhcc
Confidence 9988777777777776443
No 349
>COG1230 CzcD Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism]
Probab=24.58 E-value=5.4e+02 Score=23.43 Aligned_cols=67 Identities=7% Similarity=-0.029 Sum_probs=36.5
Q ss_pred HHhhhchhhhhcchhhhhhcCCChhhHHHHHHHHHHHHHHhhhhhhhhhcc---ccchHHHHHHHHHHHHHHhhhh
Q 012902 57 FIVFGQVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADT---VGGKAVLGFGVVWWSIATALTP 129 (454)
Q Consensus 57 ~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr---~Grr~~~~~~~~~~~~~~~l~~ 129 (454)
+.-+..+.....+.-+.+..+......+++.+..... ++.+-.++ ||.||.=+++....++..+..+
T Consensus 36 ~iE~i~g~~s~SlaLLADa~Hml~D~~al~lal~A~~------~a~r~~~~~~TfGy~R~eiLaa~~nav~Li~~s 105 (296)
T COG1230 36 LIEIIGGLLTGSLALLADALHMLSDALALLLALIAIK------LARRPATKRFTFGYKRLEILAAFLNALLLIVVS 105 (296)
T ss_pred HHHHHHHHHhccHHHHHhHHHHHHHHHHHHHHHHHHH------HhcCCCCCCCCccHhHHHHHHHHHHHHHHHHHH
Confidence 3444444455555667777776655555555443332 33333343 8888876666655555544443
No 350
>PF11511 RhodobacterPufX: Intrinsic membrane protein PufX; InterPro: IPR020169 PufX organises RC-LH1, the photosynthesis reaction centre-light harvesting complex 1 core complex of Rhodobacter sphaeroides []. It also facilitates the exchange of quinol for quinone between the reaction centre and cytochrome bc(1) complexes. In organic solvent, PufX contains two hydrophobic helices which are flanked by unstructured regions and connected by a helical bend [].; PDB: 2DW3_A 2ITA_A 2NRG_A.
Probab=24.16 E-value=2.2e+02 Score=19.00 Aligned_cols=30 Identities=10% Similarity=-0.099 Sum_probs=13.7
Q ss_pred cchhHHHHhHHHHHHHHHHHHhcCCCCCCC
Q 012902 201 WPSVFYSFGSLGTVWFTVWLSKAHSSPAED 230 (454)
Q Consensus 201 wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (454)
|-..+.+...+.++..-.+-..+||+.++.
T Consensus 30 ~Aav~~~~~~~~l~~~~~iG~~LPe~s~~a 59 (67)
T PF11511_consen 30 YAAVFFLGLWFLLVALYFIGLLLPERSRQA 59 (67)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSSTTTCSS-
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCchhcccC
Confidence 333444433334444444455677765443
No 351
>PF03596 Cad: Cadmium resistance transporter; InterPro: IPR004676 These proteins are members of the Cadmium Resistance (CadD) Family. To date, this family of proteins has only been found in Gram-positive bacteria. The CadD family includes two close orthologues in two Staphylococcus species that have been reported to function in cadmium resistance, and another staphylococcal protein that has been reported to possibly function in quaternary ammonium ion export.
Probab=23.75 E-value=1.6e+02 Score=24.68 Aligned_cols=48 Identities=17% Similarity=-0.005 Sum_probs=27.4
Q ss_pred hhhhhcchhhhhhcCCChhhHHHHHHHHHHHHHHhh---------hhhhhhhccccchHH
Q 012902 63 VNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQ---------IAGGIWADTVGGKAV 113 (454)
Q Consensus 63 ~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~---------~~~g~l~dr~Grr~~ 113 (454)
...+...|.+.+ .+..+.......+.+..++-. +..+...|||||+-+
T Consensus 111 DNigIYiP~Fa~---~s~~~l~v~l~vF~ilv~v~c~la~~l~~~p~i~~~leryg~~l~ 167 (191)
T PF03596_consen 111 DNIGIYIPLFAS---LSLAELIVILIVFLILVGVWCFLAYKLARIPIIAEFLERYGRWLV 167 (191)
T ss_pred CeEEEeehhhhc---CCHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHhcccHH
Confidence 355666777663 345555555555544444333 344667788887744
No 352
>PF11833 DUF3353: Protein of unknown function (DUF3353); InterPro: IPR021788 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 205 to 258 amino acids in length.
Probab=23.46 E-value=4.5e+02 Score=22.14 Aligned_cols=31 Identities=16% Similarity=0.318 Sum_probs=24.8
Q ss_pred ccchHHHHHHHHhhHHHHHHhHHhHHHHHhh
Q 012902 167 VAERSRSLALVYSGMYLGSVTGLAFSPFLIH 197 (454)
Q Consensus 167 ~~~rg~~~~~~~~~~~~g~~ig~~l~~~l~~ 197 (454)
.++.+++.++.-.+..+|.++|..+..++..
T Consensus 136 ~~~~~rA~~~~~~~L~~G~~lGs~l~~~l~~ 166 (194)
T PF11833_consen 136 ERKLGRAFLWTLGGLVVGLILGSLLASWLPV 166 (194)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 4667888888888888888888888877754
No 353
>TIGR03173 pbuX xanthine permease. All the seed members of this model are observed adjacent to genes for either xanthine phosphoribosyltransferase (for the conversion of xanthine to guanine, GenProp0696, ) or genes for the conversion of xanthine to urate and its concomitant catabolism (GenProp0640, GenProp0688, GenProp0686 and GenProp0687). A number of sequences scoring higher than trusted to this model are found in different genomic contexts, and the possibility exist that these transport related compounds in addition to or instead of xanthine itself. The outgroup to this family are sequences which are characterized as uracil permeases or are adjacent to established uracil phosphoribosyltransferases.
Probab=22.73 E-value=6.8e+02 Score=23.93 Aligned_cols=99 Identities=10% Similarity=0.107 Sum_probs=59.6
Q ss_pred hhhhcCCChhhHHHHHHHHHHHHHHhhhhhhhhhccccchHHHHHHHHHHHHHHhhhhhcccccHHHHHHHHHHHHhhcc
Q 012902 72 MSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMGIGEG 151 (454)
Q Consensus 72 i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~r~l~G~~~g 151 (454)
+.+..|.|.++...+.+...+...++.++-..-.-++|.|..+..+.....++.....- ..+.+...+.+-++.|+-.-
T Consensus 19 ~~~a~gl~~~~~~~~i~at~l~sgi~tllq~~~~~~~G~~~P~~~g~s~a~~~~~~~~~-~~~~~~~~~ga~~v~Gii~i 97 (406)
T TIGR03173 19 VGGALGLSAEQTAYLISADLFACGIATLIQTLGIGPFGIRLPVVQGVSFAAVGPMIAIG-AGGGLGAIFGAVIVAGLFVI 97 (406)
T ss_pred HHhhcCCCHHHHHHHHHHHHHHHHHHHHHHhccccccCCccceeecCcHHHHHHHHHHh-hhhhHHHHHHHHHHHHHHHH
Confidence 34556899998888889889999999988753333577776665554443333222211 11145555556666665533
Q ss_pred cchhhhhHHHhhhcCccchHH
Q 012902 152 VAMPAMNNILSKWVPVAERSR 172 (454)
Q Consensus 152 ~~~~~~~~~i~~~~~~~~rg~ 172 (454)
... .....+.+.+|+.-.|.
T Consensus 98 llg-~~~~~l~~~iPp~v~G~ 117 (406)
T TIGR03173 98 LLA-PFFSKLVRFFPPVVTGT 117 (406)
T ss_pred HHH-HHHHHHHHHCCcHHHHH
Confidence 322 34556788888655443
No 354
>PF11299 DUF3100: Protein of unknown function (DUF3100); InterPro: IPR021450 Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently no function is known.
Probab=22.47 E-value=1.4e+02 Score=25.78 Aligned_cols=49 Identities=18% Similarity=0.287 Sum_probs=24.4
Q ss_pred HHHHHHHHhhhhhhcchhhhhhcccccccchhHHHHHHHHHHHHHHHHHH
Q 012902 365 VLCMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVFGTA 414 (454)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~ 414 (454)
...+..+.+.+.+.........+.. |+...+..++....+-+.+..|.+
T Consensus 176 ALAMasGvGSgSMMaAa~~aL~~~~-P~~a~~i~A~AaaSNllt~~~G~Y 224 (241)
T PF11299_consen 176 ALAMASGVGSGSMMAAASGALAAAY-PEMADQILAFAAASNLLTSVTGLY 224 (241)
T ss_pred HHHHHcCCcHHHHHHHHHHHHHHHC-cchHHHHHHHHHHHHHHHHHHHHH
Confidence 3444445555555444444444433 666666666555544444444443
No 355
>PRK13108 prolipoprotein diacylglyceryl transferase; Reviewed
Probab=22.20 E-value=7.5e+02 Score=24.26 Aligned_cols=24 Identities=0% Similarity=-0.373 Sum_probs=12.0
Q ss_pred HHhCCcccchhhHhHHHHHHHHHH
Q 012902 292 QVLHFNLTESGLFCVLPWLTMAFS 315 (454)
Q Consensus 292 ~~~g~s~~~~~~~~~~~~~~~~~~ 315 (454)
+..|.++.+.--+.....+++++|
T Consensus 46 kr~g~~~~~i~dl~i~~vi~giIG 69 (460)
T PRK13108 46 TARGGERGMTYDIALWAVPFGLIG 69 (460)
T ss_pred HHcCCCHHHHHHHHHHHHHHHHHH
Confidence 335777666544444433444443
No 356
>COG0730 Predicted permeases [General function prediction only]
Probab=21.87 E-value=5.5e+02 Score=22.55 Aligned_cols=23 Identities=30% Similarity=0.303 Sum_probs=15.5
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhc
Q 012902 307 LPWLTMAFSANLGGWIADTLVSK 329 (454)
Q Consensus 307 ~~~~~~~~~~~~~g~l~dr~~~~ 329 (454)
....+.+++..++.++..|.+++
T Consensus 211 ~l~~g~~~G~~lG~~l~~~~~~~ 233 (258)
T COG0730 211 LLAVGSILGAYLGARLARRLSPK 233 (258)
T ss_pred HHHHHHHHHHHHHHHHHHhcCHH
Confidence 45566677777777777777755
No 357
>PF06783 UPF0239: Uncharacterised protein family (UPF0239); InterPro: IPR009621 This is a group of transmembrane proteins of unknown function.; GO: 0016021 integral to membrane
Probab=20.95 E-value=1.8e+02 Score=20.52 Aligned_cols=22 Identities=0% Similarity=-0.109 Sum_probs=14.4
Q ss_pred chhHHHHhHHHHHHHHHHHHhc
Q 012902 202 PSVFYSFGSLGTVWFTVWLSKA 223 (454)
Q Consensus 202 r~~f~~~~~~~~~~~~~~~~~~ 223 (454)
|+..++.+++-+++++.+.+..
T Consensus 23 RYGLf~GAIFQliCilAiI~~~ 44 (85)
T PF06783_consen 23 RYGLFVGAIFQLICILAIILPI 44 (85)
T ss_pred HHHHHHHHHHHHHHHHheeeec
Confidence 6667777777777766555433
No 358
>PF13491 DUF4117: Domain of unknown function (DUF4117)
Probab=20.80 E-value=4.6e+02 Score=21.19 Aligned_cols=37 Identities=14% Similarity=0.105 Sum_probs=21.0
Q ss_pred HHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHH
Q 012902 405 GVLAGVFGTAATGYILQHGSWDDVFKVSVGLYLVGTA 441 (454)
Q Consensus 405 ~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~ 441 (454)
...|+.+|..+...+.+..|......+.....+++..
T Consensus 120 ~~~GG~iG~~l~~~l~~~lG~~Ga~iil~~~~~~~l~ 156 (171)
T PF13491_consen 120 YGGGGIIGYLLASLLVKLLGKVGALIILLVLLLIGLL 156 (171)
T ss_pred CCCCCHhHHHHHHHHHHHHhHHHHHHHHHHHHHHHHH
Confidence 3445666666666666666665555555555444443
No 359
>KOG1278 consensus Endosomal membrane proteins, EMP70 [Intracellular trafficking, secretion, and vesicular transport]
Probab=20.73 E-value=3e+02 Score=27.34 Aligned_cols=31 Identities=16% Similarity=0.320 Sum_probs=18.4
Q ss_pred CcccchhhHhHHHHHHHHHHHHHHHHHhhhh
Q 012902 296 FNLTESGLFCVLPWLTMAFSANLGGWIADTL 326 (454)
Q Consensus 296 ~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~ 326 (454)
.+|..=|-+++...+..++..+.+|+.+-|+
T Consensus 356 lSPs~RGsLmT~~~~l~v~~G~~agY~s~rl 386 (628)
T KOG1278|consen 356 LSPSSRGSLMTAMVLLFVFMGFVAGYVSARL 386 (628)
T ss_pred CCccccccHHHHHHHHHHHHHHhhhhhhhhh
Confidence 4666666666665555555556666555554
No 360
>COG0387 ChaA Ca2+/H+ antiporter [Inorganic ion transport and metabolism]
Probab=20.16 E-value=4.7e+02 Score=24.59 Aligned_cols=63 Identities=14% Similarity=0.083 Sum_probs=34.8
Q ss_pred hhhchhhhhcchhhhhhcCCChhhHHHHHHHH--HHHHHHhhhhhhhhhccccchHHHHHHHHHHH
Q 012902 59 VFGQVNMSIAILPMSAEFNWNPATVGLIQSSF--FWGYLLTQIAGGIWADTVGGKAVLGFGVVWWS 122 (454)
Q Consensus 59 ~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~--~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~ 122 (454)
.+..-.....+....+++|.++...|.+...- ...-.+.+. --.+-||..+--=+..|..+..
T Consensus 234 ~~lae~lv~~le~~l~~~g~~~~F~G~iIa~lVgn~~E~~tAi-~aA~~~~mqls~nia~Gsalq~ 298 (368)
T COG0387 234 ALLAEILVGSLEAVLESLGAPPAFVGLIIAALVGNAPEHLTAL-RAALNNRMQLSMNIAMGSALQT 298 (368)
T ss_pred HHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHhccCHHHHHHH-HHHHhccHHHHHHHHHHHHHHH
Confidence 33334455566778889999998888764422 222223332 2345666665555555544433
Done!