BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 012907
(453 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|225433446|ref|XP_002285679.1| PREDICTED: probable DNA primase large subunit [Vitis vinifera]
gi|297741936|emb|CBI33371.3| unnamed protein product [Vitis vinifera]
Length = 452
Score = 799 bits (2063), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 378/452 (83%), Positives = 419/452 (92%), Gaps = 1/452 (0%)
Query: 1 MEIVRSQRSRTNTPNDSVSTLPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKR 60
MEI+RSQR R++ +D VSTLPLYR AP L+VRLEDFE+FA+DRLRVLKGISD L+RGK+
Sbjct: 1 MEIIRSQR-RSSKVDDVVSTLPLYRSAPPLQVRLEDFELFAIDRLRVLKGISDGLSRGKK 59
Query: 61 PEEMENLVRDLWKANMRHPEASEDVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYR 120
P+EME LV DLWKANMRHP+ASE VNKDIISHFVLRLVYCRTE+LRKWFLSMETAL+R+R
Sbjct: 60 PDEMEKLVSDLWKANMRHPQASEFVNKDIISHFVLRLVYCRTEELRKWFLSMETALFRHR 119
Query: 121 FLLGSSEAKRALMEEFDLPCKAISRTEFENAKEKLEQVARSFDQPLPTADAIFYKVPFEE 180
F L + EA+R L+ EFD P KA+S EFE+ KEKL QVARSF Q LP+ADAI++KVPFEE
Sbjct: 120 FRLETPEAQRVLLAEFDHPYKAVSHAEFESVKEKLGQVARSFGQSLPSADAIYFKVPFEE 179
Query: 181 VPELVAGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLT 240
VPELVAGRRV++ KGHAYVAM+QVVSLVVTQFRS+LSKAL+LTNRKWTSTIREQE++RLT
Sbjct: 180 VPELVAGRRVFLQKGHAYVAMNQVVSLVVTQFRSHLSKALVLTNRKWTSTIREQEKERLT 239
Query: 241 PIVEALSMSYLGPDYSQTKEFGEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRM 300
PIVEALS SYLGPDYSQ +EF EISIKD+DQ+A SSFPLCMRHLF+KLREDHHLKHGGRM
Sbjct: 240 PIVEALSTSYLGPDYSQPREFVEISIKDIDQVANSSFPLCMRHLFEKLREDHHLKHGGRM 299
Query: 301 QLGLFLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQ 360
QLGLFLKGVGL+++DALAFWKAEFSQKVG+ERFDKEYAYSIRHNYGKEGKRTDYTPYSCQ
Sbjct: 300 QLGLFLKGVGLKLDDALAFWKAEFSQKVGSERFDKEYAYSIRHNYGKEGKRTDYTPYSCQ 359
Query: 361 KIISSTPGVGDHHGCPYRHFSEENLRAALGRMGVGSRAMEDVVDKVRNRHYQLACTLTFE 420
KIISSTPGVGDHHGCPYRHFSEENLRAALG+MGVG+RAMEDV+DKVRNRHYQLACTLTFE
Sbjct: 360 KIISSTPGVGDHHGCPYRHFSEENLRAALGKMGVGNRAMEDVMDKVRNRHYQLACTLTFE 419
Query: 421 AVHSSSCDAGINHPNQYFSDSHKILQPKNNNA 452
AVH SSCDAGINHPNQYFSDS KIL PK + A
Sbjct: 420 AVHGSSCDAGINHPNQYFSDSQKILHPKVDPA 451
>gi|356512402|ref|XP_003524908.1| PREDICTED: probable DNA primase large subunit-like [Glycine max]
Length = 457
Score = 768 bits (1982), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 359/457 (78%), Positives = 413/457 (90%), Gaps = 4/457 (0%)
Query: 1 MEIVRSQRSRT--NTPNDSVS--TLPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALA 56
MEIVR Q R ++ N++VS T+PLYR AP LEVRLEDFE FA+DRLRVLKGISD ++
Sbjct: 1 MEIVRPQNRRNLLSSSNEAVSAPTIPLYRSAPPLEVRLEDFESFAIDRLRVLKGISDGMS 60
Query: 57 RGKRPEEMENLVRDLWKANMRHPEASEDVNKDIISHFVLRLVYCRTEDLRKWFLSMETAL 116
RGK+ EEMENLV+DLWK NMRH EA++ +NKDIISHFVLRLVYCRTEDLRKWFLSMETAL
Sbjct: 61 RGKKAEEMENLVKDLWKVNMRHQEATQVLNKDIISHFVLRLVYCRTEDLRKWFLSMETAL 120
Query: 117 YRYRFLLGSSEAKRALMEEFDLPCKAISRTEFENAKEKLEQVARSFDQPLPTADAIFYKV 176
+RYRF L ++EA+R +MEEFDLP +A+S EFE+ KEKL QVARS QP PTADAIFYKV
Sbjct: 121 FRYRFRLLNAEAQRTVMEEFDLPYRAVSNVEFESIKEKLGQVARSMGQPSPTADAIFYKV 180
Query: 177 PFEEVPELVAGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQER 236
PFEEVPELVAGRRV+I++G+AYVAM+Q+VSLV TQFRS LSKALILTNRKWTS+IREQE+
Sbjct: 181 PFEEVPELVAGRRVFINQGYAYVAMNQIVSLVATQFRSQLSKALILTNRKWTSSIREQEK 240
Query: 237 DRLTPIVEALSMSYLGPDYSQTKEFGEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKH 296
RLTPIVEALS SYLGPDYSQ++E+ +IS+KD+DQ+A+SSFPLCMRHLFDKL+EDHHLKH
Sbjct: 241 HRLTPIVEALSSSYLGPDYSQSREYADISLKDIDQVAKSSFPLCMRHLFDKLKEDHHLKH 300
Query: 297 GGRMQLGLFLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTDYTP 356
GGRMQLGLFLKGVGL ++DALAFW++EFS+KVG E+F+K+YAY+IRHNYGKEGKRTDYTP
Sbjct: 301 GGRMQLGLFLKGVGLNLDDALAFWRSEFSKKVGLEKFEKQYAYNIRHNYGKEGKRTDYTP 360
Query: 357 YSCQKIISSTPGVGDHHGCPYRHFSEENLRAALGRMGVGSRAMEDVVDKVRNRHYQLACT 416
YSCQKIISSTPG GDHHGCPYRHFSEENLRAAL MGV S+AMEDV+DKVRNRHYQLACT
Sbjct: 361 YSCQKIISSTPGAGDHHGCPYRHFSEENLRAALSGMGVNSQAMEDVMDKVRNRHYQLACT 420
Query: 417 LTFEAVHSSSCDAGINHPNQYFSDSHKILQPKNNNAA 453
LTFEA+H CDAGINHPNQYFSDS KIL+PK +++A
Sbjct: 421 LTFEALHGMPCDAGINHPNQYFSDSQKILKPKKDSSA 457
>gi|356528268|ref|XP_003532726.1| PREDICTED: probable DNA primase large subunit-like [Glycine max]
Length = 480
Score = 759 bits (1960), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 355/452 (78%), Positives = 409/452 (90%), Gaps = 4/452 (0%)
Query: 1 MEIVRSQRSRTN--TPNDSVS--TLPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALA 56
MEIVR Q R + + ND+VS T+PLYR AP LEVRLEDFE FA+DRLRVLKGISD ++
Sbjct: 1 MEIVRPQNRRNSFSSSNDAVSAPTIPLYRSAPPLEVRLEDFESFAIDRLRVLKGISDGMS 60
Query: 57 RGKRPEEMENLVRDLWKANMRHPEASEDVNKDIISHFVLRLVYCRTEDLRKWFLSMETAL 116
RGK+ EEMENLV+DLWK NMRH +AS+ +NKDIISHFVLRLVYCRTEDLRKWFLS E+AL
Sbjct: 61 RGKKSEEMENLVKDLWKMNMRHQDASQVLNKDIISHFVLRLVYCRTEDLRKWFLSTESAL 120
Query: 117 YRYRFLLGSSEAKRALMEEFDLPCKAISRTEFENAKEKLEQVARSFDQPLPTADAIFYKV 176
+RYRF L ++EA+RA+MEEFDLP KA+S EFE+ KEKL QVARS QP PTADAIFYKV
Sbjct: 121 FRYRFRLLNAEAQRAVMEEFDLPYKAVSNVEFESIKEKLGQVARSMGQPSPTADAIFYKV 180
Query: 177 PFEEVPELVAGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQER 236
PFEEVPELVAGR+V+I++G+AYVAM+Q+VSLV T FRS LSKALILTNRKWTS++REQE+
Sbjct: 181 PFEEVPELVAGRKVFINQGYAYVAMNQIVSLVATLFRSQLSKALILTNRKWTSSVREQEK 240
Query: 237 DRLTPIVEALSMSYLGPDYSQTKEFGEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKH 296
RLTPIVEALS SYLGPDYSQ+KE+ +IS+KD+DQ+A+SSFPLCMRHLFDKL+EDHHLKH
Sbjct: 241 HRLTPIVEALSSSYLGPDYSQSKEYADISLKDIDQVAKSSFPLCMRHLFDKLKEDHHLKH 300
Query: 297 GGRMQLGLFLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTDYTP 356
GGRMQLGLFLKGVG+ ++DALAFW++EFS+KVG E+F+K+YAY+IRHNYGKEGKRTDYTP
Sbjct: 301 GGRMQLGLFLKGVGINLDDALAFWRSEFSKKVGLEKFEKQYAYNIRHNYGKEGKRTDYTP 360
Query: 357 YSCQKIISSTPGVGDHHGCPYRHFSEENLRAALGRMGVGSRAMEDVVDKVRNRHYQLACT 416
YSCQKIISSTPG GDHHGCPYR+FSEENLRAAL RMGV S AMEDV+DKV+NRHYQLACT
Sbjct: 361 YSCQKIISSTPGAGDHHGCPYRNFSEENLRAALSRMGVNSWAMEDVMDKVKNRHYQLACT 420
Query: 417 LTFEAVHSSSCDAGINHPNQYFSDSHKILQPK 448
LTFEA+H +CDAGINHPNQYFSDS KIL+PK
Sbjct: 421 LTFEALHGMTCDAGINHPNQYFSDSQKILKPK 452
>gi|255547664|ref|XP_002514889.1| DNA primase large subunit, putative [Ricinus communis]
gi|223545940|gb|EEF47443.1| DNA primase large subunit, putative [Ricinus communis]
Length = 444
Score = 757 bits (1955), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 359/448 (80%), Positives = 399/448 (89%), Gaps = 6/448 (1%)
Query: 1 MEIVRSQRSRTNTPNDSVSTLPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKR 60
ME+V+ Q PND V TLPLYR AP LEVRLEDFE++AMDRLRVLKG+SD L+RGK+
Sbjct: 1 MELVKPQ------PNDVVPTLPLYRCAPALEVRLEDFELYAMDRLRVLKGVSDGLSRGKK 54
Query: 61 PEEMENLVRDLWKANMRHPEASEDVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYR 120
PEEME LV +LWKANM+HP+ASE +NKDIISHFVLRLVYCRTEDLRKWFLS ETAL+RYR
Sbjct: 55 PEEMEKLVNELWKANMKHPQASEVLNKDIISHFVLRLVYCRTEDLRKWFLSNETALFRYR 114
Query: 121 FLLGSSEAKRALMEEFDLPCKAISRTEFENAKEKLEQVARSFDQPLPTADAIFYKVPFEE 180
F L ++E +RAL++EF LP KA+ E E+ K+KL QVARS P P++DAIFYKVPFEE
Sbjct: 115 FCLLTAEPQRALLQEFGLPYKAVPSAELESIKDKLVQVARSIALPFPSSDAIFYKVPFEE 174
Query: 181 VPELVAGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLT 240
VPELVAGRRV+I KGHAYVA +QVVSLVVTQFRS LSKAL LTNRKWTS IRE E+ RLT
Sbjct: 175 VPELVAGRRVFIRKGHAYVAPNQVVSLVVTQFRSILSKALTLTNRKWTSMIRELEKHRLT 234
Query: 241 PIVEALSMSYLGPDYSQTKEFGEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRM 300
PIVEALS SYLGPDYSQ KEF EISIKD+D +A+SSFPLCMRHLF+KLR+DHHLKHGGRM
Sbjct: 235 PIVEALSTSYLGPDYSQPKEFAEISIKDIDMVAKSSFPLCMRHLFEKLRDDHHLKHGGRM 294
Query: 301 QLGLFLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQ 360
QLGLFLKGVGL+++DALAFWKAEFSQKVGAERFDKEYAYSIRHNYG+EGKRTDYTPY+CQ
Sbjct: 295 QLGLFLKGVGLKLDDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGREGKRTDYTPYACQ 354
Query: 361 KIISSTPGVGDHHGCPYRHFSEENLRAALGRMGVGSRAMEDVVDKVRNRHYQLACTLTFE 420
KIISSTPGVGDHHGCPYRHFSEENLRAAL MGV S A++DV+DKVRNRHYQLACTLTFE
Sbjct: 355 KIISSTPGVGDHHGCPYRHFSEENLRAALSGMGVNSGAVDDVMDKVRNRHYQLACTLTFE 414
Query: 421 AVHSSSCDAGINHPNQYFSDSHKILQPK 448
A+H SCDAGINHPNQYFSDS KIL+PK
Sbjct: 415 AIHGLSCDAGINHPNQYFSDSQKILKPK 442
>gi|343172366|gb|AEL98887.1| DNA primase large subunit, partial [Silene latifolia]
Length = 450
Score = 757 bits (1954), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 351/447 (78%), Positives = 403/447 (90%), Gaps = 1/447 (0%)
Query: 2 EIVRSQRSRTNTPNDSVSTLPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRP 61
EIVRSQ+ ++ ND VS LPLYR PQLEVRLEDFE+FA+DRLRVLKGISD L+RGK+P
Sbjct: 1 EIVRSQKKSSSIINDVVSDLPLYRSPPQLEVRLEDFELFAIDRLRVLKGISDGLSRGKKP 60
Query: 62 EEMENLVRDLWKANMRHPEASEDVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRF 121
+EME LV DLWKA+MRHP++SE +NKDIISHFVLRLVYCRT++LR WFLSMET L+RYRF
Sbjct: 61 DEME-LVNDLWKAHMRHPQSSETINKDIISHFVLRLVYCRTDELRNWFLSMETTLFRYRF 119
Query: 122 LLGSSEAKRALMEEFDLPCKAISRTEFENAKEKLEQVARSFDQPLPTADAIFYKVPFEEV 181
L S +A+RALM EF LP KA+S EFE+ KEKL QVARS Q L + D++FYKVPFEEV
Sbjct: 120 KLKSLDAQRALMAEFGLPYKAVSNAEFESVKEKLTQVARSMGQSLTSGDSVFYKVPFEEV 179
Query: 182 PELVAGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTP 241
PELVAGRRVYIHKGHAYVA+HQVVSLVVTQFRSNLSKALILTNRKWTS I +QE++RLTP
Sbjct: 180 PELVAGRRVYIHKGHAYVAVHQVVSLVVTQFRSNLSKALILTNRKWTSVISDQEKNRLTP 239
Query: 242 IVEALSMSYLGPDYSQTKEFGEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQ 301
I+EALS SY+GPDYS+ KE+GE+S+KDLD+LA +SFPLCMRHLF+KLREDHHLK+GGRMQ
Sbjct: 240 IIEALSTSYVGPDYSEPKEYGEVSLKDLDRLANNSFPLCMRHLFEKLREDHHLKYGGRMQ 299
Query: 302 LGLFLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQK 361
LGLFLKGVGL+++DALAFWK+EFS+KVG ERFDKEY+YSIRH+YGKEGKR DYTPYSCQK
Sbjct: 300 LGLFLKGVGLKLDDALAFWKSEFSKKVGPERFDKEYSYSIRHSYGKEGKRVDYTPYSCQK 359
Query: 362 IISSTPGVGDHHGCPYRHFSEENLRAALGRMGVGSRAMEDVVDKVRNRHYQLACTLTFEA 421
+IS TPGVGDHHGCP+RHFS+ENLRAAL +MGV SRA DV+DKV+NRHYQLACTLTFEA
Sbjct: 360 VISCTPGVGDHHGCPFRHFSDENLRAALNKMGVNSRATVDVMDKVKNRHYQLACTLTFEA 419
Query: 422 VHSSSCDAGINHPNQYFSDSHKILQPK 448
VH ++CD+GINHPNQYFSDS KILQ K
Sbjct: 420 VHGATCDSGINHPNQYFSDSQKILQSK 446
>gi|343172368|gb|AEL98888.1| DNA primase large subunit, partial [Silene latifolia]
Length = 450
Score = 754 bits (1948), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 349/447 (78%), Positives = 403/447 (90%), Gaps = 1/447 (0%)
Query: 2 EIVRSQRSRTNTPNDSVSTLPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRP 61
EIVRSQ+ ++ ND VS LPLYR PQLEVRLEDFE+FA+DRLRVLKGISD L+RGK+P
Sbjct: 1 EIVRSQKKSSSIINDVVSDLPLYRSPPQLEVRLEDFELFAIDRLRVLKGISDGLSRGKKP 60
Query: 62 EEMENLVRDLWKANMRHPEASEDVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRF 121
+EME LV DLWKA+MRHP++SE +NKDIISHFVLRLVYCRT++LR WFLSMET L+RYRF
Sbjct: 61 DEME-LVNDLWKAHMRHPQSSETINKDIISHFVLRLVYCRTDELRNWFLSMETTLFRYRF 119
Query: 122 LLGSSEAKRALMEEFDLPCKAISRTEFENAKEKLEQVARSFDQPLPTADAIFYKVPFEEV 181
L S +A+RALM EF LP KA+S EFE+ KEKL QVARS Q L + D++FYKVPFEEV
Sbjct: 120 KLKSLDAQRALMAEFGLPYKAVSNAEFESVKEKLTQVARSMGQSLTSGDSVFYKVPFEEV 179
Query: 182 PELVAGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTP 241
PELVAGRRVYIHKGHAYVA+HQVVSLVVTQFRSNLSKALILTNRKWTS I +QE++RLTP
Sbjct: 180 PELVAGRRVYIHKGHAYVAVHQVVSLVVTQFRSNLSKALILTNRKWTSVISDQEKNRLTP 239
Query: 242 IVEALSMSYLGPDYSQTKEFGEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQ 301
I+EALS SY+GPDYS+ KE+GE+S+KDLD+LA +SFPLCMRHLF+KLREDHHLK+GGRMQ
Sbjct: 240 IIEALSTSYVGPDYSEPKEYGEVSLKDLDRLANNSFPLCMRHLFEKLREDHHLKYGGRMQ 299
Query: 302 LGLFLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQK 361
LGLFLKGVGL+++DALAFW++EFS+K+G ERFDKEY+YSIRH+YGKEGKR DYTPYSCQK
Sbjct: 300 LGLFLKGVGLKLDDALAFWRSEFSKKLGPERFDKEYSYSIRHSYGKEGKRVDYTPYSCQK 359
Query: 362 IISSTPGVGDHHGCPYRHFSEENLRAALGRMGVGSRAMEDVVDKVRNRHYQLACTLTFEA 421
+IS TPGVGDHHGCP+RHFS+ENLRAA +MGV SRAM DV+DKV+NRHYQLACTLTFEA
Sbjct: 360 VISCTPGVGDHHGCPFRHFSDENLRAAFNKMGVNSRAMVDVMDKVKNRHYQLACTLTFEA 419
Query: 422 VHSSSCDAGINHPNQYFSDSHKILQPK 448
VH ++CD+GINHPNQYFSDS KILQ K
Sbjct: 420 VHGATCDSGINHPNQYFSDSQKILQSK 446
>gi|357520415|ref|XP_003630496.1| hypothetical protein MTR_8g097160 [Medicago truncatula]
gi|355524518|gb|AET04972.1| hypothetical protein MTR_8g097160 [Medicago truncatula]
Length = 453
Score = 752 bits (1942), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 354/451 (78%), Positives = 400/451 (88%), Gaps = 3/451 (0%)
Query: 1 MEIVRSQRSRT-NTPNDSVS--TLPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALAR 57
ME+VR Q R + ND+VS T+PLYR AP LEVRLEDFE FA+DRLRVLKGISD L+R
Sbjct: 1 MEVVRPQSHRNLFSSNDAVSAPTIPLYRSAPPLEVRLEDFESFAIDRLRVLKGISDGLSR 60
Query: 58 GKRPEEMENLVRDLWKANMRHPEASEDVNKDIISHFVLRLVYCRTEDLRKWFLSMETALY 117
GK+P+EME LV+DLWK NMRH ASE +NKDIISHFVLRLVYCRTEDLRKWFLSME AL+
Sbjct: 61 GKKPDEMEKLVKDLWKMNMRHQHASEVLNKDIISHFVLRLVYCRTEDLRKWFLSMECALF 120
Query: 118 RYRFLLGSSEAKRALMEEFDLPCKAISRTEFENAKEKLEQVARSFDQPLPTADAIFYKVP 177
RYRF ++EA+RA+M+EFDL CKA++ EFE+ KEKL QVARS QP PT DAIFYKVP
Sbjct: 121 RYRFRFLTTEAQRAIMDEFDLTCKAVNNVEFESIKEKLGQVARSMGQPSPTVDAIFYKVP 180
Query: 178 FEEVPELVAGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERD 237
FEEVPELVA R+V+I +G+AYVAM+QVVSLV T FRS LSK L+LTNRKWTS+IREQE+
Sbjct: 181 FEEVPELVARRQVFISQGYAYVAMNQVVSLVATLFRSQLSKTLVLTNRKWTSSIREQEKH 240
Query: 238 RLTPIVEALSMSYLGPDYSQTKEFGEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHG 297
RLTPIVEALS SYLGPD+SQ +E+ EIS+KD+DQ+A+SSFPLCMRHLFDKL+EDHHLKHG
Sbjct: 241 RLTPIVEALSSSYLGPDFSQPREYAEISLKDIDQVAKSSFPLCMRHLFDKLKEDHHLKHG 300
Query: 298 GRMQLGLFLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTDYTPY 357
GRMQLGLFLKGVGL ++DALAFW+AEFS+KVG E+F+KEY+Y+IRHNYGKEGKRTDYTPY
Sbjct: 301 GRMQLGLFLKGVGLNLDDALAFWRAEFSKKVGLEKFEKEYSYNIRHNYGKEGKRTDYTPY 360
Query: 358 SCQKIISSTPGVGDHHGCPYRHFSEENLRAALGRMGVGSRAMEDVVDKVRNRHYQLACTL 417
SC K+ISSTPG GDHHGCPYRHFSEENLRAAL RMGV SRAMEDV+DKVRNRHYQLACTL
Sbjct: 361 SCSKVISSTPGAGDHHGCPYRHFSEENLRAALSRMGVNSRAMEDVMDKVRNRHYQLACTL 420
Query: 418 TFEAVHSSSCDAGINHPNQYFSDSHKILQPK 448
TFEA+H CDAGINHPNQYFSDS KILQPK
Sbjct: 421 TFEALHGVQCDAGINHPNQYFSDSQKILQPK 451
>gi|224072556|ref|XP_002303780.1| predicted protein [Populus trichocarpa]
gi|222841212|gb|EEE78759.1| predicted protein [Populus trichocarpa]
Length = 453
Score = 750 bits (1937), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 363/450 (80%), Positives = 395/450 (87%), Gaps = 2/450 (0%)
Query: 1 MEIVRSQ-RSRTNTPNDSVSTLPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGK 59
MEIV+ Q + + ND VSTLPLYR AP LEVRLEDFE++A+DRLRVLKG+SD L+RGK
Sbjct: 1 MEIVKPQWKKPPPSANDVVSTLPLYRSAPPLEVRLEDFELYAIDRLRVLKGVSDGLSRGK 60
Query: 60 RPEEMENLVRDLWKANMRHPEASEDVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRY 119
RPEEME LV DLWKANMRHP SE NKDIISHFVLRLVYCRTE+LRKWFLS E AL+RY
Sbjct: 61 RPEEMEKLVNDLWKANMRHPLPSEVTNKDIISHFVLRLVYCRTEELRKWFLSNEIALFRY 120
Query: 120 RFLLGSSEAKRALMEEFDLPCKAISRTEFENAKEKLEQVARSFDQPLPTA-DAIFYKVPF 178
RF L S EA+R LM EFDLP K ++ EFE KEKL VARS Q PTA DAIFYKVPF
Sbjct: 121 RFRLLSPEAQRLLMAEFDLPYKPVTTAEFEGVKEKLHLVARSTGQLKPTASDAIFYKVPF 180
Query: 179 EEVPELVAGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDR 238
EEVPELVAGRRV+I KG+AYVAM+QVVSLVVTQFR LSKAL+LTNRKWTSTIREQE+DR
Sbjct: 181 EEVPELVAGRRVFICKGYAYVAMNQVVSLVVTQFRGLLSKALVLTNRKWTSTIREQEKDR 240
Query: 239 LTPIVEALSMSYLGPDYSQTKEFGEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGG 298
LTPIVE L SYLGPDYSQ KEF E+SIKD+DQ+A+SSFPLCMRHLF+KLREDHHLKHGG
Sbjct: 241 LTPIVETLCTSYLGPDYSQPKEFAEVSIKDIDQVAKSSFPLCMRHLFEKLREDHHLKHGG 300
Query: 299 RMQLGLFLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTDYTPYS 358
RMQLGLFLKGVGL+++DALAFWKAEFSQKVGAERFDKEYAYSIRHNYG+EGKRTDYTPYS
Sbjct: 301 RMQLGLFLKGVGLKLDDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGREGKRTDYTPYS 360
Query: 359 CQKIISSTPGVGDHHGCPYRHFSEENLRAALGRMGVGSRAMEDVVDKVRNRHYQLACTLT 418
CQKIISSTPGVGDHHGCPYRHFSEENLRAAL RMGV S ME+V+DKVRNRHYQLACTLT
Sbjct: 361 CQKIISSTPGVGDHHGCPYRHFSEENLRAALSRMGVNSGEMENVMDKVRNRHYQLACTLT 420
Query: 419 FEAVHSSSCDAGINHPNQYFSDSHKILQPK 448
FE++H SS DAGINHPNQYFSDS K + K
Sbjct: 421 FESIHGSSYDAGINHPNQYFSDSQKFFKSK 450
>gi|449445552|ref|XP_004140536.1| PREDICTED: probable DNA primase large subunit-like [Cucumis
sativus]
gi|449521050|ref|XP_004167544.1| PREDICTED: LOW QUALITY PROTEIN: probable DNA primase large
subunit-like [Cucumis sativus]
Length = 452
Score = 735 bits (1898), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 341/453 (75%), Positives = 398/453 (87%), Gaps = 1/453 (0%)
Query: 1 MEIVRSQRSRTNTPNDSVSTLPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKR 60
ME RS R ++ +S +TLPLYR AP LEVRLEDFE++A+DRLRVLKGISD L+RGK+
Sbjct: 1 MEPYRSHR-KSPISTNSTTTLPLYRSAPPLEVRLEDFELYAIDRLRVLKGISDGLSRGKK 59
Query: 61 PEEMENLVRDLWKANMRHPEASEDVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYR 120
EEME LVR+L K NM+HP+ASE VNKDIISHFVLRLVYCRTEDLRKWFLSMET L+R+R
Sbjct: 60 SEEMEKLVRELLKTNMKHPQASEVVNKDIISHFVLRLVYCRTEDLRKWFLSMETMLFRHR 119
Query: 121 FLLGSSEAKRALMEEFDLPCKAISRTEFENAKEKLEQVARSFDQPLPTADAIFYKVPFEE 180
FL E+++ + E L KAIS EFE ++KL QVAR QP P++DAI+YKVP+EE
Sbjct: 120 FLSEGPESQKQVFAELGLSYKAISNAEFEAVRDKLVQVARLIGQPAPSSDAIYYKVPWEE 179
Query: 181 VPELVAGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLT 240
VPELVAGRRV++HKG+AY+A++QVVSLV TQFRS LSKAL LTNRKWTSTIREQE+DRL
Sbjct: 180 VPELVAGRRVFLHKGYAYIAIYQVVSLVATQFRSYLSKALSLTNRKWTSTIREQEKDRLA 239
Query: 241 PIVEALSMSYLGPDYSQTKEFGEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRM 300
PIVEAL SYLGPDYSQ +E+ +ISIKDLDQ+A+SSFPLCMRHLF+KL+EDHHLKHGGRM
Sbjct: 240 PIVEALCTSYLGPDYSQPREYADISIKDLDQIAKSSFPLCMRHLFEKLKEDHHLKHGGRM 299
Query: 301 QLGLFLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQ 360
QLGLFLKGVGL+++DALAFW+AEFSQ+VGAERFDKEYAYSIRHNYGKEGKR DY+PYSCQ
Sbjct: 300 QLGLFLKGVGLKLDDALAFWRAEFSQRVGAERFDKEYAYSIRHNYGKEGKRVDYSPYSCQ 359
Query: 361 KIISSTPGVGDHHGCPYRHFSEENLRAALGRMGVGSRAMEDVVDKVRNRHYQLACTLTFE 420
K+ISS+P VGDHHGCPYRHFSE+NLRAALG+MGV +R MED++DKVRNRHYQLACTLTFE
Sbjct: 360 KVISSSPSVGDHHGCPYRHFSEDNLRAALGKMGVNNRTMEDIMDKVRNRHYQLACTLTFE 419
Query: 421 AVHSSSCDAGINHPNQYFSDSHKILQPKNNNAA 453
++H S+CDAGINHPNQYF DS K+LQ KNN+ +
Sbjct: 420 SIHGSTCDAGINHPNQYFIDSQKVLQSKNNSTS 452
>gi|224029251|gb|ACN33701.1| unknown [Zea mays]
gi|413916162|gb|AFW56094.1| hypothetical protein ZEAMMB73_117262 [Zea mays]
Length = 463
Score = 712 bits (1839), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 332/455 (72%), Positives = 388/455 (85%), Gaps = 5/455 (1%)
Query: 1 MEIVRSQRS----RTNTPNDSVSTLPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALA 56
MEIVRSQR + LP Y+ APQLEVRLE+FE+FA+DRLRVLKGISD L+
Sbjct: 1 MEIVRSQRQVAAAASGGGGGGAGALPTYKAAPQLEVRLEEFELFAIDRLRVLKGISDGLS 60
Query: 57 RGKRPEEMENLVRDLWKANMRHPEASEDVNKDIISHFVLRLVYCRTEDLRKWFLSMETAL 116
RGKRPEEME LV +LWK +MRH + +E++NKDIISHFVLRLVYCRTE+LRKWFLSMET L
Sbjct: 61 RGKRPEEMEKLVSELWKTHMRHQDPAENLNKDIISHFVLRLVYCRTEELRKWFLSMETTL 120
Query: 117 YRYRFLLGSSEAKRALMEEFDLPCKAISRTEFENAKEKLEQVARSFDQPLPTADAIFYKV 176
+RYRF L S E +R LM EF LP KA+ +EFE K+KL QVARS Q + + +F+KV
Sbjct: 121 FRYRFRLESPETQRMLMTEFQLPYKALPYSEFEAVKDKLSQVARSIGQS-ASVEHVFFKV 179
Query: 177 PFEEVPELVAGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQER 236
PFEEVP+LVAGRRV++ KG+AYVAM QVVSLVVTQFR N+SKAL LTNRKWT+TI+EQE+
Sbjct: 180 PFEEVPDLVAGRRVFLSKGYAYVAMSQVVSLVVTQFRCNISKALALTNRKWTATIKEQEK 239
Query: 237 DRLTPIVEALSMSYLGPDYSQTKEFGEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKH 296
DRLTPIVEALS +Y GPDYSQ K+ +IS+KD+DQLA+SSFPLCMRH+ DKLRE+HHLKH
Sbjct: 240 DRLTPIVEALSNAYFGPDYSQPKDAVDISLKDIDQLAKSSFPLCMRHMLDKLRENHHLKH 299
Query: 297 GGRMQLGLFLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTDYTP 356
GGRMQ GLFLKG GL++EDALAFW+AEFSQK+G+ERFDKEYAY+IRHNYGKEGKRTDYTP
Sbjct: 300 GGRMQFGLFLKGAGLKLEDALAFWRAEFSQKIGSERFDKEYAYAIRHNYGKEGKRTDYTP 359
Query: 357 YSCQKIISSTPGVGDHHGCPYRHFSEENLRAALGRMGVGSRAMEDVVDKVRNRHYQLACT 416
YSCQKIIS+TPGVGDHHGCP+RHF EENLRAAL +MGVG A+E+V+DKV+NRHYQ+ACT
Sbjct: 360 YSCQKIISATPGVGDHHGCPFRHFGEENLRAALNKMGVGGHALEEVMDKVKNRHYQVACT 419
Query: 417 LTFEAVHSSSCDAGINHPNQYFSDSHKILQPKNNN 451
LTFEA H SCD+GINHPNQYFS+S K+L+ KN
Sbjct: 420 LTFEATHGVSCDSGINHPNQYFSESQKVLRAKNQT 454
>gi|357163029|ref|XP_003579602.1| PREDICTED: probable DNA primase large subunit-like [Brachypodium
distachyon]
Length = 462
Score = 709 bits (1831), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 334/457 (73%), Positives = 384/457 (84%), Gaps = 6/457 (1%)
Query: 1 MEIVRSQRS-----RTNTPNDSVSTLPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDAL 55
MEIVRSQR T LP YR APQLEVRLE+FE+FA+DRLRVLKGISD L
Sbjct: 1 MEIVRSQRQLAAEAAAATGGGGAGALPTYRVAPQLEVRLEEFELFAIDRLRVLKGISDGL 60
Query: 56 ARGKRPEEMENLVRDLWKANMRHPEASEDVNKDIISHFVLRLVYCRTEDLRKWFLSMETA 115
+RGKRPEEME LV +LWKA+MRH + +E +NKDIISHFVLRLVYCRTE+LRKWFLSME
Sbjct: 61 SRGKRPEEMEKLVSELWKAHMRHQDPAETLNKDIISHFVLRLVYCRTEELRKWFLSMEMT 120
Query: 116 LYRYRFLLGSSEAKRALMEEFDLPCKAISRTEFENAKEKLEQVARSFDQPLPTADAIFYK 175
L+RYRF L S E++R LM EF LP KA+ +EFE K+KL QVARS Q + +++F+K
Sbjct: 121 LFRYRFRLESPESQRLLMSEFQLPYKALPHSEFEAVKDKLSQVARSIGQS-ASVESVFFK 179
Query: 176 VPFEEVPELVAGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQE 235
VPFEEVP+LVA RRV++ KG+AYVAM QVVSLVVTQFRSN+SKAL+LTNRKWTSTI+EQE
Sbjct: 180 VPFEEVPDLVASRRVFLSKGYAYVAMSQVVSLVVTQFRSNISKALVLTNRKWTSTIKEQE 239
Query: 236 RDRLTPIVEALSMSYLGPDYSQTKEFGEISIKDLDQLARSSFPLCMRHLFDKLREDHHLK 295
+DRLTPIVEALS +Y GPDYSQ + EIS KD+DQLAR+SFPLCMRH+ +KLRE+HHLK
Sbjct: 240 KDRLTPIVEALSNAYFGPDYSQPNDAAEISPKDIDQLARTSFPLCMRHMLEKLRENHHLK 299
Query: 296 HGGRMQLGLFLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTDYT 355
+GGRMQ GLFLKG GL++EDAL FW+AEFSQKVG+ERFDKEYAYSIRHNYGKEGKRTDYT
Sbjct: 300 NGGRMQFGLFLKGAGLKLEDALTFWRAEFSQKVGSERFDKEYAYSIRHNYGKEGKRTDYT 359
Query: 356 PYSCQKIISSTPGVGDHHGCPYRHFSEENLRAALGRMGVGSRAMEDVVDKVRNRHYQLAC 415
PYSCQKIIS+TPGVGD+HGCPYRHF EENLRAAL MGV A+E ++DKV+NRHYQLAC
Sbjct: 360 PYSCQKIISATPGVGDYHGCPYRHFGEENLRAALNNMGVSGNALEGILDKVKNRHYQLAC 419
Query: 416 TLTFEAVHSSSCDAGINHPNQYFSDSHKILQPKNNNA 452
TLTFEA H+ SCD GINHPNQYFS+S K+LQ KN
Sbjct: 420 TLTFEATHNVSCDTGINHPNQYFSESQKVLQAKNQTV 456
>gi|218199465|gb|EEC81892.1| hypothetical protein OsI_25713 [Oryza sativa Indica Group]
Length = 463
Score = 706 bits (1822), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 327/456 (71%), Positives = 385/456 (84%), Gaps = 7/456 (1%)
Query: 1 MEIVRSQRS------RTNTPNDSVSTLPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDA 54
MEIVRS R LP YR APQLEVRLE+FE+FA+DRLRVLKGI+D
Sbjct: 1 MEIVRSHRQIAAEAAAGVGCGGGAGGLPTYRVAPQLEVRLEEFELFAIDRLRVLKGIADG 60
Query: 55 LARGKRPEEMENLVRDLWKANMRHPEASEDVNKDIISHFVLRLVYCRTEDLRKWFLSMET 114
L+RGKRPEEME LV++LWKA+MRH + +E +NKDIISHFVLRLVYCRTE+LRKWFLSMET
Sbjct: 61 LSRGKRPEEMEKLVKELWKAHMRHQDPTETLNKDIISHFVLRLVYCRTEELRKWFLSMET 120
Query: 115 ALYRYRFLLGSSEAKRALMEEFDLPCKAISRTEFENAKEKLEQVARSFDQPLPTADAIFY 174
L+RYRF L S E++R LM EF LP KA+ +EFE K+KL QVAR+ Q +++F+
Sbjct: 121 TLFRYRFRLESPESQRMLMSEFQLPYKALPHSEFEAVKDKLSQVARTIGQS-AAVESVFF 179
Query: 175 KVPFEEVPELVAGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQ 234
KVPFEEVP+LVA RRV++ KG+AYVAM QVVSLVVTQFR N+SKAL+LTNRKWT+TI+EQ
Sbjct: 180 KVPFEEVPDLVASRRVFLSKGYAYVAMSQVVSLVVTQFRCNISKALVLTNRKWTATIKEQ 239
Query: 235 ERDRLTPIVEALSMSYLGPDYSQTKEFGEISIKDLDQLARSSFPLCMRHLFDKLREDHHL 294
E+DRLTPIVEALS +Y GPDYSQ K+ EIS+KD+DQLA++SFPLCMRH+ +KLRE+HHL
Sbjct: 240 EKDRLTPIVEALSNAYFGPDYSQPKDAVEISLKDIDQLAKTSFPLCMRHMLEKLRENHHL 299
Query: 295 KHGGRMQLGLFLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTDY 354
KHGGRMQ GLFLKG GL++EDALAFW+AEFSQKVG+ERFDKEYAYSIRHNYGKEGKRTDY
Sbjct: 300 KHGGRMQFGLFLKGAGLKLEDALAFWRAEFSQKVGSERFDKEYAYSIRHNYGKEGKRTDY 359
Query: 355 TPYSCQKIISSTPGVGDHHGCPYRHFSEENLRAALGRMGVGSRAMEDVVDKVRNRHYQLA 414
TPYSCQKIIS+TPGVGDHHGCPYRHF E+NLRAAL +MG+ +E+++DKV+NRHYQLA
Sbjct: 360 TPYSCQKIISATPGVGDHHGCPYRHFGEDNLRAALNKMGISGHPLEEIMDKVKNRHYQLA 419
Query: 415 CTLTFEAVHSSSCDAGINHPNQYFSDSHKILQPKNN 450
CT+TFEA H SCD GINHPNQYFS+S K+L+ KN
Sbjct: 420 CTMTFEAEHGVSCDTGINHPNQYFSESQKVLKAKNQ 455
>gi|242072720|ref|XP_002446296.1| hypothetical protein SORBIDRAFT_06g013790 [Sorghum bicolor]
gi|241937479|gb|EES10624.1| hypothetical protein SORBIDRAFT_06g013790 [Sorghum bicolor]
Length = 465
Score = 705 bits (1820), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 331/457 (72%), Positives = 382/457 (83%), Gaps = 7/457 (1%)
Query: 1 MEIVRSQRS------RTNTPNDSVSTLPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDA 54
MEIVRS R LP Y+ APQLEVRLE+FE+FA+DRLRVLKGISD
Sbjct: 1 MEIVRSHRQVAAAAAAAGGDGGGAGALPTYKAAPQLEVRLEEFELFAIDRLRVLKGISDG 60
Query: 55 LARGKRPEEMENLVRDLWKANMRHPEASEDVNKDIISHFVLRLVYCRTEDLRKWFLSMET 114
L+RGKRPEEME LV +LWK MRH + +E +NKDIISHFVLRLVYCRTE+LRKWFLSMET
Sbjct: 61 LSRGKRPEEMEKLVSELWKTYMRHQDPAETLNKDIISHFVLRLVYCRTEELRKWFLSMET 120
Query: 115 ALYRYRFLLGSSEAKRALMEEFDLPCKAISRTEFENAKEKLEQVARSFDQPLPTADAIFY 174
AL+RYRF L S E++R LM EF LP KA+ +EFE K+KL QVARS Q + +F+
Sbjct: 121 ALFRYRFRLESPESQRMLMTEFQLPYKALPHSEFEAVKDKLSQVARSIGQS-ANVEHVFF 179
Query: 175 KVPFEEVPELVAGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQ 234
KVPFEEVP+LVA RRV++ KG+AYVAM QVVSLVVTQFR N+SKAL LTNRKWT+TI+EQ
Sbjct: 180 KVPFEEVPDLVASRRVFLSKGYAYVAMSQVVSLVVTQFRCNISKALALTNRKWTATIKEQ 239
Query: 235 ERDRLTPIVEALSMSYLGPDYSQTKEFGEISIKDLDQLARSSFPLCMRHLFDKLREDHHL 294
E+ RLTPIVEALS +Y GPDYSQ K+ +IS+KD+DQLA+SSFPLCMRH+ DKLRE+HHL
Sbjct: 240 EKGRLTPIVEALSNAYFGPDYSQPKDTVDISLKDIDQLAKSSFPLCMRHMLDKLRENHHL 299
Query: 295 KHGGRMQLGLFLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTDY 354
KHGGRMQ GLFLKG GL++EDALAFW+AEFSQKVG+ERFDKEYAY+IRHNYGKEGKRTDY
Sbjct: 300 KHGGRMQFGLFLKGAGLKLEDALAFWRAEFSQKVGSERFDKEYAYTIRHNYGKEGKRTDY 359
Query: 355 TPYSCQKIISSTPGVGDHHGCPYRHFSEENLRAALGRMGVGSRAMEDVVDKVRNRHYQLA 414
TPYSCQKIIS+TPGVGDHHGCP+RHF EENLRAAL +MGVG A+E+++DKV+NRHYQLA
Sbjct: 360 TPYSCQKIISATPGVGDHHGCPFRHFGEENLRAALNKMGVGGHALEEIMDKVKNRHYQLA 419
Query: 415 CTLTFEAVHSSSCDAGINHPNQYFSDSHKILQPKNNN 451
CTLTFE H SCD+GINHPNQYFS+S KIL+ KN
Sbjct: 420 CTLTFETTHGVSCDSGINHPNQYFSESQKILRAKNQT 456
>gi|115471667|ref|NP_001059432.1| Os07g0406800 [Oryza sativa Japonica Group]
gi|50510201|dbj|BAD31369.1| putative DNA primase large subunit [Oryza sativa Japonica Group]
gi|50510256|dbj|BAD31461.1| putative DNA primase large subunit [Oryza sativa Japonica Group]
gi|113610968|dbj|BAF21346.1| Os07g0406800 [Oryza sativa Japonica Group]
gi|215678806|dbj|BAG95243.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222636872|gb|EEE67004.1| hypothetical protein OsJ_23920 [Oryza sativa Japonica Group]
Length = 463
Score = 705 bits (1819), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 327/456 (71%), Positives = 385/456 (84%), Gaps = 7/456 (1%)
Query: 1 MEIVRSQRS------RTNTPNDSVSTLPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDA 54
MEIVRS R LP YR APQLEVRLE+FE+FA+DRLRVLKGI+D
Sbjct: 1 MEIVRSHRQIAAEAAAGVGCGGGAGGLPTYRVAPQLEVRLEEFELFAIDRLRVLKGIADG 60
Query: 55 LARGKRPEEMENLVRDLWKANMRHPEASEDVNKDIISHFVLRLVYCRTEDLRKWFLSMET 114
L+RGKRPEEME LV++LWKA+MRH + +E +NKDIISHFVLRLVYCRTE+LRKWFLSMET
Sbjct: 61 LSRGKRPEEMEKLVKELWKAHMRHQDPTETLNKDIISHFVLRLVYCRTEELRKWFLSMET 120
Query: 115 ALYRYRFLLGSSEAKRALMEEFDLPCKAISRTEFENAKEKLEQVARSFDQPLPTADAIFY 174
L+RYRF L S E++R LM EF LP KA+ +EFE K+KL QVAR+ Q +++F+
Sbjct: 121 TLFRYRFRLESPESQRMLMSEFRLPYKALPHSEFEAVKDKLSQVARTIGQS-AAVESVFF 179
Query: 175 KVPFEEVPELVAGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQ 234
KVPFEEVP+LVA RRV++ KG+AYVAM QVVSLVVTQFR N+SKAL+LTNRKWT+TI+EQ
Sbjct: 180 KVPFEEVPDLVASRRVFLSKGYAYVAMSQVVSLVVTQFRCNISKALVLTNRKWTATIKEQ 239
Query: 235 ERDRLTPIVEALSMSYLGPDYSQTKEFGEISIKDLDQLARSSFPLCMRHLFDKLREDHHL 294
E+DRLTPIVEALS +Y GPDYSQ K+ EIS+KD+DQLA++SFPLCMRH+ +KLRE+HHL
Sbjct: 240 EKDRLTPIVEALSNAYFGPDYSQPKDAVEISLKDIDQLAKTSFPLCMRHMLEKLRENHHL 299
Query: 295 KHGGRMQLGLFLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTDY 354
KHGGRMQ GLFLKG GL++EDALAFW+AEFSQKVG+ERFDKEYAYSIRHNYGKEGKRTDY
Sbjct: 300 KHGGRMQFGLFLKGAGLKLEDALAFWRAEFSQKVGSERFDKEYAYSIRHNYGKEGKRTDY 359
Query: 355 TPYSCQKIISSTPGVGDHHGCPYRHFSEENLRAALGRMGVGSRAMEDVVDKVRNRHYQLA 414
TPYSCQKIIS+TPGVGDHHGCPYRHF E+NLRAAL +MG+ +E+++DKV+NRHYQLA
Sbjct: 360 TPYSCQKIISATPGVGDHHGCPYRHFGEDNLRAALNKMGISGHPLEEIMDKVKNRHYQLA 419
Query: 415 CTLTFEAVHSSSCDAGINHPNQYFSDSHKILQPKNN 450
CT+TFEA H SCD GINHPNQYFS+S K+L+ KN
Sbjct: 420 CTMTFEAEHGVSCDTGINHPNQYFSESQKVLKAKNQ 455
>gi|326506648|dbj|BAJ91365.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 463
Score = 701 bits (1810), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 327/458 (71%), Positives = 380/458 (82%), Gaps = 7/458 (1%)
Query: 1 MEIVRSQRS------RTNTPNDSVSTLPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDA 54
MEIVRSQR + LP YR APQLEVRLE+FE+FA+DRLRVLKGISD
Sbjct: 1 MEIVRSQRQLAAAAAAASGGGSGAGALPTYRVAPQLEVRLEEFELFAIDRLRVLKGISDG 60
Query: 55 LARGKRPEEMENLVRDLWKANMRHPEASEDVNKDIISHFVLRLVYCRTEDLRKWFLSMET 114
L+RGKRPEEME LV +LWKA+MRH + +E +NKDIISHFVLRLVYCRTE+LRKWFLSME
Sbjct: 61 LSRGKRPEEMEKLVSELWKAHMRHQDPAETLNKDIISHFVLRLVYCRTEELRKWFLSMEN 120
Query: 115 ALYRYRFLLGSSEAKRALMEEFDLPCKAISRTEFENAKEKLEQVARSFDQPLPTADAIFY 174
L+RYRF L S E++R LM EF LP KA+ +EFE K+KL +VARS Q + +++F+
Sbjct: 121 TLFRYRFRLESPESQRLLMSEFQLPYKALPHSEFEAVKDKLSRVARSISQS-TSVESVFF 179
Query: 175 KVPFEEVPELVAGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQ 234
KVPFEEVP+LVA RRV++ KG+AYVAM QVVSLVVTQFR N+SKAL+LTNRKWT+TI+EQ
Sbjct: 180 KVPFEEVPDLVANRRVFLSKGYAYVAMSQVVSLVVTQFRCNISKALVLTNRKWTATIKEQ 239
Query: 235 ERDRLTPIVEALSMSYLGPDYSQTKEFGEISIKDLDQLARSSFPLCMRHLFDKLREDHHL 294
E+DRLTPIVEALS +Y GPDYSQ + EIS KD+DQLAR+SFPLCMRH+ +KLRE+HHL
Sbjct: 240 EKDRLTPIVEALSNAYFGPDYSQKTDAAEISPKDIDQLARTSFPLCMRHMLEKLRENHHL 299
Query: 295 KHGGRMQLGLFLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTDY 354
KHGGRMQ GLFLKG GL++EDA+ FW++EFSQKVG+ERFDKEYAY IRHNYGKEGKRTDY
Sbjct: 300 KHGGRMQFGLFLKGAGLKLEDAVTFWRSEFSQKVGSERFDKEYAYGIRHNYGKEGKRTDY 359
Query: 355 TPYSCQKIISSTPGVGDHHGCPYRHFSEENLRAALGRMGVGSRAMEDVVDKVRNRHYQLA 414
TPYSCQKIIS+TPGV DHHGCPYRHF EENLRAAL MGV A+E ++DKV+NRHYQLA
Sbjct: 360 TPYSCQKIISATPGVDDHHGCPYRHFGEENLRAALNNMGVSGNALEGILDKVKNRHYQLA 419
Query: 415 CTLTFEAVHSSSCDAGINHPNQYFSDSHKILQPKNNNA 452
CT+TFEA H SCD GINHPNQYFS+S K+LQ KN
Sbjct: 420 CTMTFEATHGVSCDTGINHPNQYFSESQKVLQAKNQTV 457
>gi|212274493|ref|NP_001130651.1| uncharacterized protein LOC100191752 [Zea mays]
gi|194689746|gb|ACF78957.1| unknown [Zea mays]
Length = 458
Score = 699 bits (1805), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 324/450 (72%), Positives = 382/450 (84%), Gaps = 2/450 (0%)
Query: 1 MEIVRSQRS-RTNTPNDSVSTLPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGK 59
MEIVRS R LP Y+ APQLEVRLE+FE+FA+DRLRVLKGISD L+RGK
Sbjct: 1 MEIVRSHRQVAAAAAGGGAGALPTYKAAPQLEVRLEEFELFAIDRLRVLKGISDGLSRGK 60
Query: 60 RPEEMENLVRDLWKANMRHPEASEDVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRY 119
RPEE+E LV +LWK +M H + +E +NKDIISHFVLRLVYCRTE+LRKWFLSMET L+RY
Sbjct: 61 RPEEVEKLVNELWKTHMGHQDPAETLNKDIISHFVLRLVYCRTEELRKWFLSMETTLFRY 120
Query: 120 RFLLGSSEAKRALMEEFDLPCKAISRTEFENAKEKLEQVARSFDQPLPTADAIFYKVPFE 179
RF L + E++R LM EF LP KA+ +EFE K+KL QVARS Q D +F+KVPFE
Sbjct: 121 RFRLENPESQRMLMTEFQLPYKALPHSEFEAVKDKLSQVARSIGQS-ANVDHVFFKVPFE 179
Query: 180 EVPELVAGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRL 239
+VP+LVA RRV++ KG+AYVAM+QVVSLVVTQFR N+SKAL LTNRKW++TI+EQE+DRL
Sbjct: 180 QVPDLVASRRVFLSKGYAYVAMNQVVSLVVTQFRCNISKALALTNRKWSATIKEQEKDRL 239
Query: 240 TPIVEALSMSYLGPDYSQTKEFGEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGR 299
TPIVEALS +Y GPDYSQ K+ +IS+KD+DQLA+SSFPLCMRH+ DKLRE+HHLKHGGR
Sbjct: 240 TPIVEALSNAYFGPDYSQPKDAVDISLKDIDQLAKSSFPLCMRHMLDKLRENHHLKHGGR 299
Query: 300 MQLGLFLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSC 359
+Q GLFLKG GL++EDALAFW+AEFSQK+G+ERFDKEYAYSIRHNYGKEGKRTDYTPYSC
Sbjct: 300 LQFGLFLKGAGLKLEDALAFWRAEFSQKIGSERFDKEYAYSIRHNYGKEGKRTDYTPYSC 359
Query: 360 QKIISSTPGVGDHHGCPYRHFSEENLRAALGRMGVGSRAMEDVVDKVRNRHYQLACTLTF 419
Q IIS+TPGVGDHHGCP+RHF EENLRAAL +MGVG A+E+++DKV+NRHYQLACTLTF
Sbjct: 360 QNIISATPGVGDHHGCPFRHFGEENLRAALNKMGVGGHALEEIIDKVKNRHYQLACTLTF 419
Query: 420 EAVHSSSCDAGINHPNQYFSDSHKILQPKN 449
E H SCD+GINHPNQYFS+S K+L+ KN
Sbjct: 420 ETTHGVSCDSGINHPNQYFSESQKVLRAKN 449
>gi|334183707|ref|NP_001185340.1| DNA primase large subunit [Arabidopsis thaliana]
gi|34395762|sp|Q84WJ2.2|PRI2_ARATH RecName: Full=Probable DNA primase large subunit
gi|21536968|gb|AAM61309.1| unknown [Arabidopsis thaliana]
gi|332196508|gb|AEE34629.1| DNA primase large subunit [Arabidopsis thaliana]
Length = 454
Score = 685 bits (1767), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 318/452 (70%), Positives = 381/452 (84%)
Query: 1 MEIVRSQRSRTNTPNDSVSTLPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKR 60
ME++RSQ+ + S TLPLY AP +EVRLE+FE+FA+DRLRVLKG+SD LAR +
Sbjct: 1 MEVIRSQKRTVSNDVVSTPTLPLYLTAPHMEVRLEEFELFAIDRLRVLKGVSDGLARARN 60
Query: 61 PEEMENLVRDLWKANMRHPEASEDVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYR 120
P EM++LV LWK +MR SE +NKDIISHFVLRLVYCR+++L+KWFLSMETAL+R+R
Sbjct: 61 PNEMDDLVETLWKEHMRLSNVSEMINKDIISHFVLRLVYCRSDELKKWFLSMETALFRHR 120
Query: 121 FLLGSSEAKRALMEEFDLPCKAISRTEFENAKEKLEQVARSFDQPLPTADAIFYKVPFEE 180
F L E +RA++ EF LP KA+ E E+ KE+L VARS Q + I+YKVPFEE
Sbjct: 121 FRLKKIEEQRAIVGEFGLPYKAVIGAELESLKERLGLVARSHGQISSDVENIYYKVPFEE 180
Query: 181 VPELVAGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLT 240
VP+LVA RRV + KG A+VA Q+VSLVVTQFRS+LSKALILTNRKWT+TIRE+E+DRLT
Sbjct: 181 VPDLVASRRVLLQKGFAFVAGTQLVSLVVTQFRSHLSKALILTNRKWTTTIREREKDRLT 240
Query: 241 PIVEALSMSYLGPDYSQTKEFGEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRM 300
PIVEALS SYLGPDYSQ+ E+ +IS+KD+DQ+++SSFPLCMRHLF+KLREDHHLKHGGRM
Sbjct: 241 PIVEALSTSYLGPDYSQSNEYADISLKDIDQVSKSSFPLCMRHLFEKLREDHHLKHGGRM 300
Query: 301 QLGLFLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQ 360
QLGLFLKGVGL+++DALAFW+ EF++KVG+ERFDKEYAY+IRHNYGKEGKRTDYTPY+C
Sbjct: 301 QLGLFLKGVGLKLDDALAFWREEFTKKVGSERFDKEYAYAIRHNYGKEGKRTDYTPYACS 360
Query: 361 KIISSTPGVGDHHGCPYRHFSEENLRAALGRMGVGSRAMEDVVDKVRNRHYQLACTLTFE 420
KII+S PG GDHHGCPYRHFSE+NL+AAL RMG+ SR MEDV+DKVRNRHYQLACTLTFE
Sbjct: 361 KIITSAPGAGDHHGCPYRHFSEDNLKAALSRMGLSSRGMEDVMDKVRNRHYQLACTLTFE 420
Query: 421 AVHSSSCDAGINHPNQYFSDSHKILQPKNNNA 452
AV+ +SCD GINHPNQYF +S KIL+ K A
Sbjct: 421 AVYGTSCDTGINHPNQYFEESQKILKSKTPAA 452
>gi|27808614|gb|AAO24587.1| At1g67320 [Arabidopsis thaliana]
gi|110736276|dbj|BAF00108.1| hypothetical protein [Arabidopsis thaliana]
Length = 454
Score = 684 bits (1766), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 318/452 (70%), Positives = 381/452 (84%)
Query: 1 MEIVRSQRSRTNTPNDSVSTLPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKR 60
ME++RSQ+ + S TLPLY AP +EVRLE+FE+FA+DRLRVLKG+SD LAR +
Sbjct: 1 MEVIRSQKRTVSNDVVSAPTLPLYLTAPHMEVRLEEFELFAIDRLRVLKGVSDGLARARN 60
Query: 61 PEEMENLVRDLWKANMRHPEASEDVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYR 120
P EM++LV LWK +MR SE +NKDIISHFVLRLVYCR+++L+KWFLSMETAL+R+R
Sbjct: 61 PNEMDDLVETLWKEHMRLSNVSEMINKDIISHFVLRLVYCRSDELKKWFLSMETALFRHR 120
Query: 121 FLLGSSEAKRALMEEFDLPCKAISRTEFENAKEKLEQVARSFDQPLPTADAIFYKVPFEE 180
F L E +RA++ EF LP KA+ E E+ KE+L VARS Q + I+YKVPFEE
Sbjct: 121 FRLKKIEEQRAIVGEFGLPYKAVIGAELESLKERLGLVARSHGQISSDVENIYYKVPFEE 180
Query: 181 VPELVAGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLT 240
VP+LVA RRV + KG A+VA Q+VSLVVTQFRS+LSKALILTNRKWT+TIRE+E+DRLT
Sbjct: 181 VPDLVASRRVLLQKGFAFVAGTQLVSLVVTQFRSHLSKALILTNRKWTTTIREREKDRLT 240
Query: 241 PIVEALSMSYLGPDYSQTKEFGEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRM 300
PIVEALS SYLGPDYSQ+ E+ +IS+KD+DQ+++SSFPLCMRHLF+KLREDHHLKHGGRM
Sbjct: 241 PIVEALSTSYLGPDYSQSNEYADISLKDIDQVSKSSFPLCMRHLFEKLREDHHLKHGGRM 300
Query: 301 QLGLFLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQ 360
QLGLFLKGVGL+++DALAFW+ EF++KVG+ERFDKEYAY+IRHNYGKEGKRTDYTPY+C
Sbjct: 301 QLGLFLKGVGLKLDDALAFWREEFTKKVGSERFDKEYAYAIRHNYGKEGKRTDYTPYACS 360
Query: 361 KIISSTPGVGDHHGCPYRHFSEENLRAALGRMGVGSRAMEDVVDKVRNRHYQLACTLTFE 420
KII+S PG GDHHGCPYRHFSE+NL+AAL RMG+ SR MEDV+DKVRNRHYQLACTLTFE
Sbjct: 361 KIITSAPGAGDHHGCPYRHFSEDNLKAALSRMGLSSRGMEDVMDKVRNRHYQLACTLTFE 420
Query: 421 AVHSSSCDAGINHPNQYFSDSHKILQPKNNNA 452
AV+ +SCD GINHPNQYF +S KIL+ K A
Sbjct: 421 AVYGTSCDTGINHPNQYFEESQKILKSKTPAA 452
>gi|334183705|ref|NP_001185339.1| DNA primase large subunit [Arabidopsis thaliana]
gi|332196507|gb|AEE34628.1| DNA primase large subunit [Arabidopsis thaliana]
Length = 490
Score = 670 bits (1728), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 320/488 (65%), Positives = 384/488 (78%), Gaps = 36/488 (7%)
Query: 1 MEIVRSQRSRTNTPNDSVSTLPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKR 60
ME++RSQ+ + S TLPLY AP +EVRLE+FE+FA+DRLRVLKG+SD LAR +
Sbjct: 1 MEVIRSQKRTVSNDVVSTPTLPLYLTAPHMEVRLEEFELFAIDRLRVLKGVSDGLARARN 60
Query: 61 PEEMENLVRDLWKANMRHPEASEDVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYR 120
P EM++LV LWK +MR SE +NKDIISHFVLRLVYCR+++L+KWFLSMETAL+R+R
Sbjct: 61 PNEMDDLVETLWKEHMRLSNVSEMINKDIISHFVLRLVYCRSDELKKWFLSMETALFRHR 120
Query: 121 FLLGSSEAKRALMEEFDLPCKAISRTEFENAKEKLEQVARSFDQ-------------PLP 167
F L E +RA++ EF LP KA+ E E+ KE+L VARS Q P+
Sbjct: 121 FRLKKIEEQRAIVGEFGLPYKAVIGAELESLKERLGLVARSHGQISSDGTCNMLYFDPMF 180
Query: 168 T-----------------------ADAIFYKVPFEEVPELVAGRRVYIHKGHAYVAMHQV 204
T + I+YKVPFEEVP+LVA RRV + KG A+VA Q+
Sbjct: 181 TLSHLAVKLVPFLMEKFLSFLSFAVENIYYKVPFEEVPDLVASRRVLLQKGFAFVAGTQL 240
Query: 205 VSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEALSMSYLGPDYSQTKEFGEI 264
VSLVVTQFRS+LSKALILTNRKWT+TIRE+E+DRLTPIVEALS SYLGPDYSQ+ E+ +I
Sbjct: 241 VSLVVTQFRSHLSKALILTNRKWTTTIREREKDRLTPIVEALSTSYLGPDYSQSNEYADI 300
Query: 265 SIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWKAEF 324
S+KD+DQ+++SSFPLCMRHLF+KLREDHHLKHGGRMQLGLFLKGVGL+++DALAFW+ EF
Sbjct: 301 SLKDIDQVSKSSFPLCMRHLFEKLREDHHLKHGGRMQLGLFLKGVGLKLDDALAFWREEF 360
Query: 325 SQKVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQKIISSTPGVGDHHGCPYRHFSEEN 384
++KVG+ERFDKEYAY+IRHNYGKEGKRTDYTPY+C KII+S PG GDHHGCPYRHFSE+N
Sbjct: 361 TKKVGSERFDKEYAYAIRHNYGKEGKRTDYTPYACSKIITSAPGAGDHHGCPYRHFSEDN 420
Query: 385 LRAALGRMGVGSRAMEDVVDKVRNRHYQLACTLTFEAVHSSSCDAGINHPNQYFSDSHKI 444
L+AAL RMG+ SR MEDV+DKVRNRHYQLACTLTFEAV+ +SCD GINHPNQYF +S KI
Sbjct: 421 LKAALSRMGLSSRGMEDVMDKVRNRHYQLACTLTFEAVYGTSCDTGINHPNQYFEESQKI 480
Query: 445 LQPKNNNA 452
L+ K A
Sbjct: 481 LKSKTPAA 488
>gi|42563014|ref|NP_564893.2| DNA primase large subunit [Arabidopsis thaliana]
gi|332196506|gb|AEE34627.1| DNA primase large subunit [Arabidopsis thaliana]
Length = 449
Score = 669 bits (1725), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 314/452 (69%), Positives = 376/452 (83%), Gaps = 5/452 (1%)
Query: 1 MEIVRSQRSRTNTPNDSVSTLPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKR 60
ME++RSQ+ + S TLPLY AP +EVRLE+FE+FA+DRLRVLKG+SD LAR +
Sbjct: 1 MEVIRSQKRTVSNDVVSTPTLPLYLTAPHMEVRLEEFELFAIDRLRVLKGVSDGLARARN 60
Query: 61 PEEMENLVRDLWKANMRHPEASEDVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYR 120
P EM++LV LWK +MR SE +NKDIISHFVLRLVYCR+++L+KWFLSMETAL+R+R
Sbjct: 61 PNEMDDLVETLWKEHMRLSNVSEMINKDIISHFVLRLVYCRSDELKKWFLSMETALFRHR 120
Query: 121 FLLGSSEAKRALMEEFDLPCKAISRTEFENAKEKLEQVARSFDQPLPTADAIFYKVPFEE 180
F L E +RA++ EF LP KA+ E E+ KE+L VARS Q + I+YKVPFEE
Sbjct: 121 FRLKKIEEQRAIVGEFGLPYKAVIGAELESLKERLGLVARSHGQISSDVENIYYKVPFEE 180
Query: 181 VPELVAGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLT 240
VP+LVA RRV + KG A+VA Q+VSLVVTQFRS+LSKALILTNRKWT+TIRE+E+DRLT
Sbjct: 181 VPDLVASRRVLLQKGFAFVAGTQLVSLVVTQFRSHLSKALILTNRKWTTTIREREKDRLT 240
Query: 241 PIVEALSMSYLGPDYSQTKEFGEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRM 300
PIVEALS SYLGPDYSQ+ E+ +IS+KD+DQ+++SSFPLCMRHLF+KLREDHHLKHGGRM
Sbjct: 241 PIVEALSTSYLGPDYSQSNEYADISLKDIDQVSKSSFPLCMRHLFEKLREDHHLKHGGRM 300
Query: 301 QLGLFLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQ 360
QLGLFLK ++DALAFW+ EF++KVG+ERFDKEYAY+IRHNYGKEGKRTDYTPY+C
Sbjct: 301 QLGLFLK-----LDDALAFWREEFTKKVGSERFDKEYAYAIRHNYGKEGKRTDYTPYACS 355
Query: 361 KIISSTPGVGDHHGCPYRHFSEENLRAALGRMGVGSRAMEDVVDKVRNRHYQLACTLTFE 420
KII+S PG GDHHGCPYRHFSE+NL+AAL RMG+ SR MEDV+DKVRNRHYQLACTLTFE
Sbjct: 356 KIITSAPGAGDHHGCPYRHFSEDNLKAALSRMGLSSRGMEDVMDKVRNRHYQLACTLTFE 415
Query: 421 AVHSSSCDAGINHPNQYFSDSHKILQPKNNNA 452
AV+ +SCD GINHPNQYF +S KIL+ K A
Sbjct: 416 AVYGTSCDTGINHPNQYFEESQKILKSKTPAA 447
>gi|9828626|gb|AAG00249.1|AC002130_14 F1N21.14 [Arabidopsis thaliana]
Length = 765
Score = 610 bits (1572), Expect = e-172, Method: Compositional matrix adjust.
Identities = 300/488 (61%), Positives = 364/488 (74%), Gaps = 56/488 (11%)
Query: 1 MEIVRSQRSRTNTPNDSVSTLPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKR 60
ME++RSQ+ + S TLPLY AP +EVRLE+FE+FA+DRLRVLKG+SD LAR +
Sbjct: 296 MEVIRSQKRTVSNDVVSTPTLPLYLTAPHMEVRLEEFELFAIDRLRVLKGVSDGLARARN 355
Query: 61 PEEMENLVRDLWKANMRHPEASEDVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYR 120
P EM++LV LWK +MR SE +NKDIISHFVLRLVYCR+++L+KWFLSMETAL+R+R
Sbjct: 356 PNEMDDLVETLWKEHMRLSNVSEMINKDIISHFVLRLVYCRSDELKKWFLSMETALFRHR 415
Query: 121 FLLGSSEAKRALMEEFDLPCKAISRTEFENAKEKLEQVARSFDQ-------------PLP 167
F L E +RA++ EF LP KA+ E E+ KE+L VARS Q P+
Sbjct: 416 FRLKKIEEQRAIVGEFGLPYKAVIGAELESLKERLGLVARSHGQISSDGTCNMLYFDPMF 475
Query: 168 T-----------------------ADAIFYKVPFEEVPELVAGRRVYIHKGHAYVAMHQV 204
T + I+YKVPFEEVP+LVA RRV + KG A+VA Q+
Sbjct: 476 TLSHLAVKLVPFLMEKFLSFLSFAVENIYYKVPFEEVPDLVASRRVLLQKGFAFVAGTQL 535
Query: 205 VSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEALSMSYLGPDYSQTKEFGEI 264
VSLVVTQFRS+LSKALILTNRKWT+TIRE+E+DRLTPIVEALS SYLGPDYSQ+ E+ +I
Sbjct: 536 VSLVVTQFRSHLSKALILTNRKWTTTIREREKDRLTPIVEALSTSYLGPDYSQSNEYADI 595
Query: 265 SIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWKAEF 324
S+KD+DQ+++SSFPLCMRHLF+K GVGL+++DALAFW+ EF
Sbjct: 596 SLKDIDQVSKSSFPLCMRHLFEK--------------------GVGLKLDDALAFWREEF 635
Query: 325 SQKVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQKIISSTPGVGDHHGCPYRHFSEEN 384
++KVG+ERFDKEYAY+IRHNYGKEGKRTDYTPY+C KII+S PG GDHHGCPYRHFSE+N
Sbjct: 636 TKKVGSERFDKEYAYAIRHNYGKEGKRTDYTPYACSKIITSAPGAGDHHGCPYRHFSEDN 695
Query: 385 LRAALGRMGVGSRAMEDVVDKVRNRHYQLACTLTFEAVHSSSCDAGINHPNQYFSDSHKI 444
L+AAL RMG+ SR MEDV+DKVRNRHYQLACTLTFEAV+ +SCD GINHPNQYF +S KI
Sbjct: 696 LKAALSRMGLSSRGMEDVMDKVRNRHYQLACTLTFEAVYGTSCDTGINHPNQYFEESQKI 755
Query: 445 LQPKNNNA 452
L+ K A
Sbjct: 756 LKSKTPAA 763
>gi|297841417|ref|XP_002888590.1| F1N21.14 [Arabidopsis lyrata subsp. lyrata]
gi|297334431|gb|EFH64849.1| F1N21.14 [Arabidopsis lyrata subsp. lyrata]
Length = 727
Score = 592 bits (1526), Expect = e-166, Method: Compositional matrix adjust.
Identities = 291/471 (61%), Positives = 358/471 (76%), Gaps = 39/471 (8%)
Query: 1 MEIVRSQRSRTNTPNDSVSTLPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKR 60
ME++RSQ+ + S TLPLY AP +EVRLE+FE+FA+DRLRVLKG+SD LARG+
Sbjct: 275 MEVIRSQKRTVSNDVVSTPTLPLYLTAPPMEVRLEEFELFAIDRLRVLKGVSDGLARGRN 334
Query: 61 PEEMENLVRDLWKANMRHPEASEDVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYR 120
P EM++LV LW+ +MR + SE +NKDIISHFVLRLVYCR+++L+KWFLSMETAL+R+R
Sbjct: 335 PNEMDDLVETLWREHMRLSDVSEMINKDIISHFVLRLVYCRSDELKKWFLSMETALFRHR 394
Query: 121 FLLGSSEAKRALMEEFDLPCKAISRTEFENAKEKLEQVARS------FDQPLPTADAIFY 174
F E +RA++ EF LP KA+ E E E + FD L ++ + Y
Sbjct: 395 FRRKKIEEQRAIVGEFGLPYKAVIGAELEFEGEVGASCTFTCRDMLYFDTILASSSSRNY 454
Query: 175 ---------KVPFEEVPELVAGRRVYIHKGHAYVA----MHQVVSLVVTQFRSNLSKALI 221
VPFEEVP+LVAGRRV + KG+A+VA H +VSLVVTQFRS+LSKALI
Sbjct: 455 FFFTSLSYLAVPFEEVPDLVAGRRVLLQKGYAFVAGSQASHGLVSLVVTQFRSHLSKALI 514
Query: 222 LTNRKWTSTIREQERDRLTPIVEALSMSYLGPDYSQTKEFGEISIKDLDQLARSSFPLCM 281
LTNRKWT+TIRE+E+DRLTPIVEALS SYLGPDYSQ+ E+ +IS+KD+DQ+++SSFPLCM
Sbjct: 515 LTNRKWTTTIREREKDRLTPIVEALSTSYLGPDYSQSSEYADISLKDIDQVSKSSFPLCM 574
Query: 282 RHLFDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSI 341
RHLF+K GVGL+++DALAFW+ EF++KVG+ERFDKEYAY+I
Sbjct: 575 RHLFEK--------------------GVGLKLDDALAFWREEFTKKVGSERFDKEYAYAI 614
Query: 342 RHNYGKEGKRTDYTPYSCQKIISSTPGVGDHHGCPYRHFSEENLRAALGRMGVGSRAMED 401
RHNYGKEGKRTDYTPY+C KII+S PG GDHHGCPYRHFSE+NL+AAL RMG+ SR MED
Sbjct: 615 RHNYGKEGKRTDYTPYACSKIITSAPGAGDHHGCPYRHFSEDNLKAALSRMGLSSRGMED 674
Query: 402 VVDKVRNRHYQLACTLTFEAVHSSSCDAGINHPNQYFSDSHKILQPKNNNA 452
V+DKVRN+HYQLACTLTFEAV+ +SCD GINHPNQYF +S KIL+ K A
Sbjct: 675 VMDKVRNKHYQLACTLTFEAVYGASCDTGINHPNQYFEESQKILKSKTPAA 725
>gi|302769209|ref|XP_002968024.1| hypothetical protein SELMODRAFT_88080 [Selaginella moellendorffii]
gi|300164762|gb|EFJ31371.1| hypothetical protein SELMODRAFT_88080 [Selaginella moellendorffii]
Length = 487
Score = 549 bits (1414), Expect = e-153, Method: Compositional matrix adjust.
Identities = 265/429 (61%), Positives = 329/429 (76%), Gaps = 13/429 (3%)
Query: 21 LPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEEMENLVRDLWKANMRHPE 80
L Y AP E+ LEDFE +A+DRLRVLKGI + +RGK+ EEM+ LV DLW+ +M
Sbjct: 29 LSFYEAAPDEEISLEDFEEYALDRLRVLKGIEEERSRGKKMEEMDPLVSDLWRKHM---- 84
Query: 81 ASEDVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKRALMEEFDLPC 140
S+ KD+ISHF+LRL YCRTEDLR+WFL +E+ L+R+RF A++ LM++ +LP
Sbjct: 85 GSDSSKKDVISHFILRLAYCRTEDLRRWFLGIESVLFRHRFRCEMPAAQQKLMDDCNLPY 144
Query: 141 KAISRTEFENAKEKLEQVARSFDQPLPTADAIFYKVPFEEVPELVAGRRVYIHKGHAYVA 200
KA++ E E KE LE VARS +Q + ++YKVPFE+VPELV+GR+VY+ +G A+V
Sbjct: 145 KAMTSAEIEAVKENLESVARSTNQV--SNSKMYYKVPFEDVPELVSGRKVYLRRGEAFVP 202
Query: 201 MHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEALSMSYLGPDYSQTKE 260
Q+ LVV QFRS LSKAL+LTNRKW S I +E+DRL P+VEALS YLGPDY+Q K
Sbjct: 203 REQLSFLVVGQFRSRLSKALVLTNRKWISFIAGEEKDRLAPMVEALSTRYLGPDYTQPKS 262
Query: 261 FGEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFW 320
EIS++DLDQLA++SFPLCMR LF +LR+DHHL+HGGR QLGLFLK +EDALAFW
Sbjct: 263 SNEISLQDLDQLAKASFPLCMRSLFFQLRDDHHLRHGGRQQLGLFLK-----LEDALAFW 317
Query: 321 KAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQKIISSTPGVGDHHGCPYRHF 380
+AEFS+KVG E+FDKEYAY++RHNYGKEGKRTDYTPYSC K+I STPGVGDHHGCPYRHF
Sbjct: 318 RAEFSRKVGVEKFDKEYAYNVRHNYGKEGKRTDYTPYSCVKLIMSTPGVGDHHGCPYRHF 377
Query: 381 SEENLRAALGRMGVGSRAMEDVVDKVRNRHYQLACTLTFEAVHSSSCDAGINHPNQYFSD 440
SE+ LRA+LG +G+ SR + ++K R++HYQLAC FEAVH S D GINHPNQYF
Sbjct: 378 SEDKLRASLGGLGLNSRQVSSALEKTRSQHYQLACAEVFEAVHGCSSD-GINHPNQYFEQ 436
Query: 441 SHKIL-QPK 448
S +L QPK
Sbjct: 437 SRALLQQPK 445
>gi|302821527|ref|XP_002992426.1| hypothetical protein SELMODRAFT_135234 [Selaginella moellendorffii]
gi|300139842|gb|EFJ06576.1| hypothetical protein SELMODRAFT_135234 [Selaginella moellendorffii]
Length = 487
Score = 546 bits (1407), Expect = e-153, Method: Compositional matrix adjust.
Identities = 264/429 (61%), Positives = 329/429 (76%), Gaps = 13/429 (3%)
Query: 21 LPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEEMENLVRDLWKANMRHPE 80
L Y AP E+ LEDFE +A+DRLRVLK I +A +RGK+ EEM+ LV DLW+ +M
Sbjct: 29 LSFYEAAPDEEISLEDFEEYALDRLRVLKEIEEARSRGKKMEEMDPLVSDLWRKHM---- 84
Query: 81 ASEDVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKRALMEEFDLPC 140
S+ KD+ISHF+LRL YCRTEDLR+WFL +E+ L+R+RF A++ LM++ +LP
Sbjct: 85 GSDSSKKDVISHFILRLAYCRTEDLRRWFLGIESVLFRHRFRCEMPAAQQKLMDDCNLPY 144
Query: 141 KAISRTEFENAKEKLEQVARSFDQPLPTADAIFYKVPFEEVPELVAGRRVYIHKGHAYVA 200
KA++ E E KE LE VARS +Q + ++YKVPFE+VPELV+GR+VY+ +G A+V
Sbjct: 145 KAMTSAEIEAVKENLESVARSTNQV--SNSKMYYKVPFEDVPELVSGRKVYLRRGEAFVP 202
Query: 201 MHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEALSMSYLGPDYSQTKE 260
Q+ LVV QFRS LSKAL+LTNRKW S I +E+DRL P+VEALS YLGPDY+Q K
Sbjct: 203 REQLSFLVVGQFRSRLSKALVLTNRKWISFIAGEEKDRLAPMVEALSTRYLGPDYTQPKS 262
Query: 261 FGEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFW 320
EI+++DLDQLA++SFPLCMR LF +LR+DHHL+HGGR QLGLFLK +EDALAFW
Sbjct: 263 SNEIALQDLDQLAKASFPLCMRSLFFQLRDDHHLRHGGRQQLGLFLK-----LEDALAFW 317
Query: 321 KAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQKIISSTPGVGDHHGCPYRHF 380
+AEFS+KVG E+FDKEYAY++RHNYGKEGKRTDYTPYSC K+I STPGVGDHHGCPYRHF
Sbjct: 318 RAEFSRKVGVEKFDKEYAYNVRHNYGKEGKRTDYTPYSCVKLIMSTPGVGDHHGCPYRHF 377
Query: 381 SEENLRAALGRMGVGSRAMEDVVDKVRNRHYQLACTLTFEAVHSSSCDAGINHPNQYFSD 440
SE+ LRA+LG +G+ SR + ++K R++HYQLAC FEAVH S D GINHPNQYF
Sbjct: 378 SEDKLRASLGGLGLNSRQVSSALEKTRSQHYQLACAEVFEAVHGCSSD-GINHPNQYFEQ 436
Query: 441 SHKIL-QPK 448
S +L QPK
Sbjct: 437 SRALLQQPK 445
>gi|168066161|ref|XP_001785011.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162663428|gb|EDQ50192.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 437
Score = 544 bits (1402), Expect = e-152, Method: Compositional matrix adjust.
Identities = 256/432 (59%), Positives = 326/432 (75%), Gaps = 2/432 (0%)
Query: 23 LYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEEMENLVRDLWKANMRHPEAS 82
+Y AP ++V LEDFE +A+DRLRVL I + +RGKR EE+++ V DLWK +MR +
Sbjct: 1 MYLVAPDVDVSLEDFEQYALDRLRVLIAIEENRSRGKRAEEVDSAVSDLWKKHMRTVHSD 60
Query: 83 EDVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKRALMEEFDLPCKA 142
KD+ISHFVLRLV+CRTE+LR+WF+ METAL+R+RF S E+++A +E+ LP K+
Sbjct: 61 AQQQKDVISHFVLRLVHCRTEELRRWFMEMETALFRFRFKAESPESQKAFIEDHKLPYKS 120
Query: 143 ISRTEFENAKEKLEQVARSFDQPLP-TADAIFYKVPFEEVPELVAGRRVYIHKGHAYVAM 201
IS EFE KEKL QV RS +Q + FYKVPFEEV +LVA RRVY+H+GHA+V
Sbjct: 121 ISSGEFEAMKEKLAQVMRSSNQSASLIGETNFYKVPFEEVLDLVATRRVYVHQGHAFVPR 180
Query: 202 HQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEALSMSYLGPDYSQTKEF 261
Q+V++V FRS LS++LILTNR WT+ QE DRL+PI+EALS YL PDYS++
Sbjct: 181 DQLVTIVSNHFRSMLSQSLILTNRNWTAMFAAQEEDRLSPILEALSKRYLAPDYSKSVSG 240
Query: 262 GEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWK 321
++++DLD LA SFPLCMRHL+ KL+EDHHL+HGGR QLGLFLKG+GL++EDALAFW+
Sbjct: 241 SSVALQDLDGLAMRSFPLCMRHLYLKLQEDHHLRHGGRQQLGLFLKGIGLKLEDALAFWR 300
Query: 322 AEFSQKVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQKIISSTPGVGDHHGCPYRHFS 381
F+ ++ AE+FDKEYAY++RHNYGKEGKRTDYTPYSC II S PGVGDHHGCP+RHFS
Sbjct: 301 GAFAPRMPAEKFDKEYAYNVRHNYGKEGKRTDYTPYSCMYIIMSNPGVGDHHGCPFRHFS 360
Query: 382 EENLRAALGRMGVGSRAMEDVVDKVRNRHYQLACTLTFEAVHSSSCDAGINHPNQYFSDS 441
ENL AAL M + + +++V++K R RHYQLAC TFE H+ CD GINHPNQYFS S
Sbjct: 361 AENLHAALSGMRLEPKTIDEVMEKTRGRHYQLACAATFEGSHNCQCD-GINHPNQYFSQS 419
Query: 442 HKILQPKNNNAA 453
L+ + NA+
Sbjct: 420 QNYLKEQAENAS 431
>gi|388515037|gb|AFK45580.1| unknown [Medicago truncatula]
Length = 328
Score = 503 bits (1295), Expect = e-140, Method: Compositional matrix adjust.
Identities = 243/325 (74%), Positives = 282/325 (86%), Gaps = 3/325 (0%)
Query: 1 MEIVRSQRSRT-NTPNDSVS--TLPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALAR 57
ME+VR Q R + ND+VS T+PLYR AP LEVRLEDFE FA+DRLRVLKGISD L+R
Sbjct: 1 MEVVRPQSHRNLFSSNDAVSAPTIPLYRSAPPLEVRLEDFESFAIDRLRVLKGISDGLSR 60
Query: 58 GKRPEEMENLVRDLWKANMRHPEASEDVNKDIISHFVLRLVYCRTEDLRKWFLSMETALY 117
GK+P+EME LV+DLWK NMRH ASE +NKDIISHFVLRLVYCRTEDLRKWFLSME AL+
Sbjct: 61 GKKPDEMEKLVKDLWKMNMRHQHASEVLNKDIISHFVLRLVYCRTEDLRKWFLSMECALF 120
Query: 118 RYRFLLGSSEAKRALMEEFDLPCKAISRTEFENAKEKLEQVARSFDQPLPTADAIFYKVP 177
RYRF ++EA+RA+M+EFDL CKA++ EFE+ KEKL QVARS QP PT DAIFYKVP
Sbjct: 121 RYRFRFLTTEAQRAIMDEFDLTCKAVNNVEFESIKEKLGQVARSMGQPSPTVDAIFYKVP 180
Query: 178 FEEVPELVAGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERD 237
FEEVPELVA R+V+I +G+AYVAM+QVVSLV T FRS LSK L+LTNRKWTS+IREQE+
Sbjct: 181 FEEVPELVARRQVFISQGYAYVAMNQVVSLVATLFRSQLSKTLVLTNRKWTSSIREQEKH 240
Query: 238 RLTPIVEALSMSYLGPDYSQTKEFGEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHG 297
RLTPIVEALS SYLGPD+SQ +E+ EIS+KD+DQ+A+SSFPLCMRHLFDKL+EDHHLKHG
Sbjct: 241 RLTPIVEALSSSYLGPDFSQPREYAEISLKDIDQVAKSSFPLCMRHLFDKLKEDHHLKHG 300
Query: 298 GRMQLGLFLKGVGLRMEDALAFWKA 322
GRMQLGLFLKGVGL ++DALAF ++
Sbjct: 301 GRMQLGLFLKGVGLNLDDALAFLES 325
>gi|413918130|gb|AFW58062.1| hypothetical protein ZEAMMB73_118458, partial [Zea mays]
Length = 327
Score = 471 bits (1213), Expect = e-130, Method: Compositional matrix adjust.
Identities = 227/328 (69%), Positives = 271/328 (82%), Gaps = 2/328 (0%)
Query: 1 MEIVRSQRS-RTNTPNDSVSTLPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGK 59
MEIVRS R LP Y+ APQLEVRLE+FE+FA+DRLRVLKGISD L+RGK
Sbjct: 1 MEIVRSHRQVAAAAAGGGAGALPTYKAAPQLEVRLEEFELFAIDRLRVLKGISDGLSRGK 60
Query: 60 RPEEMENLVRDLWKANMRHPEASEDVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRY 119
RPEE+E LV +LWK +M H + +E +NKDIISHFVLRLVYCRTE+LRKWFLSMET L+RY
Sbjct: 61 RPEEVEKLVNELWKTHMGHQDPAETLNKDIISHFVLRLVYCRTEELRKWFLSMETTLFRY 120
Query: 120 RFLLGSSEAKRALMEEFDLPCKAISRTEFENAKEKLEQVARSFDQPLPTADAIFYKVPFE 179
RF L + E++R LM EF LP KA+ +EFE K+KL QVARS Q D +F+KVPFE
Sbjct: 121 RFRLENPESQRMLMTEFQLPYKALPHSEFEAVKDKLSQVARSIGQS-ANVDHVFFKVPFE 179
Query: 180 EVPELVAGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRL 239
+VP+LVA RRV++ KG+AYVAM+QVVSLVVTQFR N+SKAL LTNRKW++TI+EQE+DRL
Sbjct: 180 QVPDLVASRRVFLSKGYAYVAMNQVVSLVVTQFRCNISKALALTNRKWSATIKEQEKDRL 239
Query: 240 TPIVEALSMSYLGPDYSQTKEFGEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGR 299
TPIVEALS +Y GPDYSQ K+ +IS+KD+DQLA+SSFPLCMRH+ DKLRE+HHLKHGGR
Sbjct: 240 TPIVEALSNAYFGPDYSQPKDAVDISLKDIDQLAKSSFPLCMRHMLDKLRENHHLKHGGR 299
Query: 300 MQLGLFLKGVGLRMEDALAFWKAEFSQK 327
+Q GLFLKG GL++EDALAFW+AEFSQK
Sbjct: 300 LQFGLFLKGAGLKLEDALAFWRAEFSQK 327
>gi|293333855|ref|NP_001170760.1| uncharacterized protein LOC100384853 [Zea mays]
gi|238007372|gb|ACR34721.1| unknown [Zea mays]
Length = 260
Score = 449 bits (1154), Expect = e-123, Method: Compositional matrix adjust.
Identities = 199/249 (79%), Positives = 229/249 (91%)
Query: 201 MHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEALSMSYLGPDYSQTKE 260
M QVVSLVVTQFR N+SKAL LTNRKWT+TI+EQE+DRLTPIVEALS +Y GPDYSQ K+
Sbjct: 1 MSQVVSLVVTQFRCNISKALALTNRKWTATIKEQEKDRLTPIVEALSNAYFGPDYSQPKD 60
Query: 261 FGEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFW 320
+IS+KD+DQLA+SSFPLCMRH+ DKLRE+HHLKHGGRMQ GLFLKG GL++EDALAFW
Sbjct: 61 AVDISLKDIDQLAKSSFPLCMRHMLDKLRENHHLKHGGRMQFGLFLKGAGLKLEDALAFW 120
Query: 321 KAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQKIISSTPGVGDHHGCPYRHF 380
+AEFSQK+G+ERFDKEYAY+IRHNYGKEGKRTDYTPYSCQKIIS+TPGVGDHHGCP+RHF
Sbjct: 121 RAEFSQKIGSERFDKEYAYAIRHNYGKEGKRTDYTPYSCQKIISATPGVGDHHGCPFRHF 180
Query: 381 SEENLRAALGRMGVGSRAMEDVVDKVRNRHYQLACTLTFEAVHSSSCDAGINHPNQYFSD 440
EENLRAAL +MGVG A+E+V+DKV+NRHYQ+ACTLTFEA H SCD+GINHPNQYFS+
Sbjct: 181 GEENLRAALNKMGVGGHALEEVMDKVKNRHYQVACTLTFEATHGVSCDSGINHPNQYFSE 240
Query: 441 SHKILQPKN 449
S K+L+ KN
Sbjct: 241 SQKVLRAKN 249
>gi|50510202|dbj|BAD31370.1| putative DNA primase large subunit [Oryza sativa Japonica Group]
gi|50510257|dbj|BAD31462.1| putative DNA primase large subunit [Oryza sativa Japonica Group]
Length = 258
Score = 443 bits (1140), Expect = e-122, Method: Compositional matrix adjust.
Identities = 196/249 (78%), Positives = 227/249 (91%)
Query: 201 MHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEALSMSYLGPDYSQTKE 260
M QVVSLVVTQFR N+SKAL+LTNRKWT+TI+EQE+DRLTPIVEALS +Y GPDYSQ K+
Sbjct: 1 MSQVVSLVVTQFRCNISKALVLTNRKWTATIKEQEKDRLTPIVEALSNAYFGPDYSQPKD 60
Query: 261 FGEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFW 320
EIS+KD+DQLA++SFPLCMRH+ +KLRE+HHLKHGGRMQ GLFLKG GL++EDALAFW
Sbjct: 61 AVEISLKDIDQLAKTSFPLCMRHMLEKLRENHHLKHGGRMQFGLFLKGAGLKLEDALAFW 120
Query: 321 KAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQKIISSTPGVGDHHGCPYRHF 380
+AEFSQKVG+ERFDKEYAYSIRHNYGKEGKRTDYTPYSCQKIIS+TPGVGDHHGCPYRHF
Sbjct: 121 RAEFSQKVGSERFDKEYAYSIRHNYGKEGKRTDYTPYSCQKIISATPGVGDHHGCPYRHF 180
Query: 381 SEENLRAALGRMGVGSRAMEDVVDKVRNRHYQLACTLTFEAVHSSSCDAGINHPNQYFSD 440
E+NLRAAL +MG+ +E+++DKV+NRHYQLACT+TFEA H SCD GINHPNQYFS+
Sbjct: 181 GEDNLRAALNKMGISGHPLEEIMDKVKNRHYQLACTMTFEAEHGVSCDTGINHPNQYFSE 240
Query: 441 SHKILQPKN 449
S K+L+ KN
Sbjct: 241 SQKVLKAKN 249
>gi|303284793|ref|XP_003061687.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226457017|gb|EEH54317.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 474
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 212/441 (48%), Positives = 294/441 (66%), Gaps = 21/441 (4%)
Query: 23 LYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEEMENLVRDLWKANMR---HP 79
+Y +AP EV LE+FE++A++R+RVLK I D L+RGK+P EME L+ K R H
Sbjct: 1 MYAHAPSKEVALEEFELYALERMRVLKAIDDGLSRGKKPAEMELLITKEDKLLTRGSLHL 60
Query: 80 EASEDVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRF--LLGSSEAKRALMEEFD 137
E E+ KD +SHF LRL YCRTE+LR+WFL+ E AL+R+RF L G+ +A A ++
Sbjct: 61 E-DEETRKDEVSHFALRLAYCRTEELRRWFLAQECALFRHRFRQLRGAQQA--AFLQHNG 117
Query: 138 LPCKAISRTEFENAKEKLEQVARSF------DQPLPTADAIFYKVPFEEVPELVAGRRVY 191
L I EFE + L + L + FY VPFEEV +LV GRRV+
Sbjct: 118 LDYHPIDAKEFERVRADLHNTLNGMMRKDDANAALANGASGFYAVPFEEVSDLVRGRRVF 177
Query: 192 IHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEALSMSYL 251
+ G AYV Q+ SLVV FRS LSKAL++ +R+W + +E++RL P+V +LS YL
Sbjct: 178 MSGGKAYVPQDQLASLVVGAFRSRLSKALVVASRRWAQHVAGEEKERLAPVVLSLSKRYL 237
Query: 252 GPDYSQTKEFGE------ISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLF 305
G DY + +++KDL+ A SFPLC ++LF+ ++++HHL+H GR QL L+
Sbjct: 238 GRDYGKAGGANGEGGGDVVTLKDLNGAAAKSFPLCAKNLFNMVKKEHHLRHEGRRQLQLY 297
Query: 306 LKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQKIISS 365
LKG+GL +E+A+ FWK EF +K+ AE+F+KEYAY++RH YGKEGKR DYTP++C K IS+
Sbjct: 298 LKGIGLSLEEAMLFWKTEFCKKIPAEKFEKEYAYAVRHAYGKEGKRVDYTPHTCMKCISA 357
Query: 366 TPGVGDHHGCPYRHFSEENLRAALGRMGVGSRAMEDVVDKVRNRHYQLACTLTFEAVHSS 425
PG G+HHGCPY+ F EE+LRAALG + + R + ++VDK + +HYQ+AC +TFEAVH
Sbjct: 358 NPGPGEHHGCPYKTFGEESLRAALGGLQITGRQVNEIVDKAKGKHYQIACGMTFEAVHGG 417
Query: 426 -SCDAGINHPNQYFSDSHKIL 445
S + G+ HPNQ+F +S K L
Sbjct: 418 KSIEQGVQHPNQWFQESRKAL 438
>gi|307105331|gb|EFN53581.1| hypothetical protein CHLNCDRAFT_8099, partial [Chlorella
variabilis]
Length = 423
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 215/438 (49%), Positives = 279/438 (63%), Gaps = 23/438 (5%)
Query: 17 SVSTLPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEEMENLVRDLWKANM 76
S L +YR P E+ +E+FE FAMDRLRVLKGI D +G R ++ME + +L++ +M
Sbjct: 1 SKPALSMYRALPDGEIAIEEFERFAMDRLRVLKGIEDLKVKGFRFDQMEPKILELYEQHM 60
Query: 77 RHPEASEDVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRF--LLGSSEAKRALME 134
+ E KDIISHFVLRL YC T+DLR+W L+ E L+R RF +L + + E
Sbjct: 61 GGATSEERHRKDIISHFVLRLAYCSTDDLRRWLLAQECDLFRARFNQMLADEQVPQEFSE 120
Query: 135 EFDLPCKAISRTEFENAKEKLEQVARSFDQPLPTADAI----FYKVPFEEVPELVAGRRV 190
E +EKL QV S TA + FYKVPFE+VP+LVA RRV
Sbjct: 121 EL---------------REKLLQVLMSLPGVKATAGMVTADSFYKVPFEQVPDLVASRRV 165
Query: 191 YIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEALSMSY 250
Y+ G AYV+ Q+ SLV+ FR+ LSKAL +T R+W + E DRL P+V++LS Y
Sbjct: 166 YLQAGFAYVSRDQMSSLVIQPFRAALSKALTVTARRWEVVVAPGEADRLAPMVQSLSRRY 225
Query: 251 LGPDYS--QTKEFGEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKG 308
LGPD+S + + D+ +LAR SFPLCM ++D L E HHLKH GR+Q LFLKG
Sbjct: 226 LGPDFSNREVDDDKRPKAADIPRLARESFPLCMATMYDALHEKHHLKHDGRLQFRLFLKG 285
Query: 309 VGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQKIISSTPG 368
+GL ++ AL FW+ E + E+F KEY Y I+H+YGKEGKRTDYTPY+C KI+SS PG
Sbjct: 286 IGLPLDQALHFWRTEMAPVTPTEKFTKEYEYGIKHSYGKEGKRTDYTPYTCAKIVSSIPG 345
Query: 369 VGDHHGCPYRHFSEENLRAALGRMGVGSRAMEDVVDKVRNRHYQLACTLTFEAVHSSSCD 428
V HGCPYR F++++LR+ALGR+ V +E+ V K HYQLAC +E H SCD
Sbjct: 346 VDQVHGCPYRTFNQQSLRSALGRLQVSPAKIEEAVGKAAAGHYQLACAAAWEGKHGCSCD 405
Query: 429 AGINHPNQYFSDSHKILQ 446
+GINHPNQYF +S K LQ
Sbjct: 406 SGINHPNQYFEESRKALQ 423
>gi|255086227|ref|XP_002509080.1| predicted protein [Micromonas sp. RCC299]
gi|226524358|gb|ACO70338.1| predicted protein [Micromonas sp. RCC299]
Length = 464
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 197/434 (45%), Positives = 288/434 (66%), Gaps = 11/434 (2%)
Query: 23 LYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEEMENLVRDLWKANMRHPEAS 82
+Y AP +V LE+FE++A+DR+++LK I D L+ GK+ EM+ L+ +
Sbjct: 1 MYANAPADDVELEEFELYALDRIKLLKAIDDGLSTGKKGPEMKTLIDSKMREFGLQTGRD 60
Query: 83 EDVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKRALMEEFDLPCKA 142
D+ KD +SHF LR+ YCRT++LR+WFL E L++++F + K A ++ D+ +
Sbjct: 61 YDIRKDEVSHFALRMAYCRTDELRRWFLQNECTLFKHKFDGMAPNQKAAFLKTHDMGYQP 120
Query: 143 ISRTEFENA-KEKLEQVARSF-----DQPLPTADAIFYKVPFEEVPELVAGRRVYIHKGH 196
+ E+ ++ + ++F D+ + FYKVPFEEV +LV RRV++ G
Sbjct: 121 VDNDEWTTTIQQGIRDTIKTFANKEVDEIMAKGANGFYKVPFEEVFDLVRSRRVFLAGGS 180
Query: 197 AYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEALSMSYLGPDYS 256
AYV + SLVV FRS LSKAL +T+R+W + +E+DRL P++ +LS Y+G DY
Sbjct: 181 AYVPQKDLTSLVVGVFRSRLSKALAMTSRRWAQHVAGEEKDRLAPVIMSLSKRYIGRDYG 240
Query: 257 QTKEFGE----ISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLR 312
+ GE I++KDL++ A SFPLC +HLF K++EDHHL+H GR QL L+LKG+GL
Sbjct: 241 KQGADGEVGEVITLKDLNKAAAESFPLCAKHLFRKMKEDHHLRHEGRRQLQLYLKGIGLA 300
Query: 313 MEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQKIISSTPGVGDH 372
+E+A+ FWK EF +K+ AE+F+KEYAY++RH YGKEGKR DYTP++C K I++ PG G+H
Sbjct: 301 LEEAMLFWKTEFCKKIPAEKFEKEYAYAVRHAYGKEGKRVDYTPHTCMKCIAANPGNGEH 360
Query: 373 HGCPYRHFSEENLRAALGRMGVGSRAMEDVVDKVRNRHYQLACTLTFEAVH-SSSCDAGI 431
HGCP++ F EE LRAAL M + + + ++V+K + +HYQLAC +TFEA H + DAG+
Sbjct: 361 HGCPFKTFGEEGLRAALSGMSIKAAKVNEIVEKAKGQHYQLACGMTFEATHEGKTIDAGV 420
Query: 432 NHPNQYFSDSHKIL 445
HPNQYF +S K L
Sbjct: 421 QHPNQYFQESRKAL 434
>gi|384245650|gb|EIE19143.1| hypothetical protein COCSUDRAFT_59627 [Coccomyxa subellipsoidea
C-169]
Length = 478
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 206/446 (46%), Positives = 286/446 (64%), Gaps = 22/446 (4%)
Query: 4 VRSQRSRTNTPNDSVS--TLPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRP 61
R+ + + P + V+ + LY+ +P EV +E+FE FA+DRLRVLKGI DA +G +
Sbjct: 10 ARTIKPAADVPAEDVTHQRISLYKDSPSGEVCIEEFERFAIDRLRVLKGIEDAKTKGFKG 69
Query: 62 EEMENLVRDLWKANMRHPEASEDVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRF 121
++++ LV L + +++ A E KD +SHFVLRL YCRTEDLR+WFL E L+R RF
Sbjct: 70 DQLQGLVIQLAEKHLKCATAEETRWKDAVSHFVLRLAYCRTEDLRRWFLQHECELFRCRF 129
Query: 122 LLGSSEAKRALMEEFDLPCKAISRTEFENAKEKLEQVARSFDQPLPTADAIFYKVPFEEV 181
++ M +A++ E++ K L KVPFE+V
Sbjct: 130 KNEMPTSQVEFMRRHSFAYEALAGEEYQGLKADL------------------VKVPFEQV 171
Query: 182 PELVAGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTP 241
P+LVA RRV + G AYV+ H+V SLVV FR+ LS +L LT R+W ++I ++E +RLTP
Sbjct: 172 PDLVASRRVLLRGGAAYVSRHEVASLVVGHFRAGLSHSLALTARRWAASIADEEAERLTP 231
Query: 242 IVEALSMSYLGPDYSQTKEFGE--ISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGR 299
+V +LS YLGPDY ++ + ++ L LA+ SFPLCM+++ +L D HLKH GR
Sbjct: 232 VVLSLSERYLGPDYGDGEKGPQEVVTAAQLPALAKQSFPLCMQNMHSRLHADSHLKHFGR 291
Query: 300 MQLGLFLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSC 359
++LGLFLKG+GL +E+A+ FW+AEF+ KV E+FDKEYAY++R+NY KEGKRTDYTPYSC
Sbjct: 292 LELGLFLKGIGLPLEEAMKFWRAEFAPKVQGEKFDKEYAYNVRYNYAKEGKRTDYTPYSC 351
Query: 360 QKIISSTPGVGDHHGCPYRHFSEENLRAALGRMGVGSRAMEDVVDKVRNRHYQLACTLTF 419
+KIIS + GCPY+ S +L L M + R++E+VV K R H+QLAC F
Sbjct: 352 KKIISIPVPKNEAFGCPYKTLSPADLAEQLRAMRLPQRSVEEVVAKARAGHFQLACMAEF 411
Query: 420 EAVHSSSCDAGINHPNQYFSDSHKIL 445
E HS CD GINHPNQY+ +S K+L
Sbjct: 412 EGRHSCICDEGINHPNQYYDESRKVL 437
>gi|291240166|ref|XP_002739991.1| PREDICTED: DNA primase, p58 subunit-like [Saccoglossus kowalevskii]
Length = 539
Score = 369 bits (946), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 199/456 (43%), Positives = 285/456 (62%), Gaps = 31/456 (6%)
Query: 18 VSTLPLYRYAPQLEVRLEDFEVFAMDRLRVLK-----GISDALARGKRPEEMENLVRDLW 72
V L Y P + L +FE FA+DRL+VLK GI K E M+ +R +
Sbjct: 28 VHNLQFYSVPPSDNISLTEFEDFAIDRLKVLKHVESLGIKFVKGNEKYQESMDRELRKMM 87
Query: 73 KANMRHPEASEDVN--------KDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLG 124
+R + S++++ KD ISHF+LRL YCR+E+LR+WF++ E L+RYRF
Sbjct: 88 PIAIR--KTSDEISDTDYDERRKDHISHFILRLAYCRSEELRRWFIAQELDLFRYRFQQE 145
Query: 125 SSEAKRALMEEFDLPCKAISRTEFENAKEKLE---QVARS-FDQPLPTADAI-FYKVPFE 179
S ++ + +EE +L + I KEKL+ ++A S ++ + T + ++KVPF
Sbjct: 146 SRDSIKQFLEENNLHYEPIP------DKEKLKIIKELANSGYNTSVTTVENTDYFKVPFV 199
Query: 180 EVPELVAGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRL 239
E +LV R+VY+ +G+AYV +VS+V++ FR++LS +L +T R + +E RL
Sbjct: 200 EALDLVKSRKVYLERGYAYVPRSDLVSIVLSAFRAHLSHSLAITAR---AVPYLEEDSRL 256
Query: 240 TPIVEALSMSYLGPDYSQTKEFGEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGR 299
P++ ALS YLG DY+ K G+++I ++ L++ SFPLCMR L + L+++HHL+H GR
Sbjct: 257 LPMLTALSKQYLGQDYTCKKANGKVTIDQIEPLSKKSFPLCMRQLQESLKQEHHLRHWGR 316
Query: 300 MQLGLFLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSC 359
MQ GLFLKG+G+ +EDAL FW+AEFS+K+ ++FDK Y+Y+IRHNYGKEGKR DYTPYSC
Sbjct: 317 MQYGLFLKGIGVMLEDALRFWRAEFSKKIDPDKFDKSYSYNIRHNYGKEGKRADYTPYSC 376
Query: 360 QKII-SSTPGVGDHHGCPYRHFSEENLRAALGRMGVGSRAMEDVVDKVRNRHYQLACTLT 418
KII ++ P GD HGCP+RH LR L GV + +V+ V N HYQLAC
Sbjct: 377 MKIIMTNPPANGDFHGCPFRHSDAGLLRQRLASYGVSKDGVNEVMGLVSNSHYQLACAKY 436
Query: 419 FEAVHS-SSCDAGINHPNQYFSDSHKILQPKNNNAA 453
F+ H+ + GINHPNQYF +S KIL P + A
Sbjct: 437 FDLTHNVEASTIGINHPNQYFDESQKILNPSAESKA 472
>gi|405952757|gb|EKC20531.1| DNA primase large subunit [Crassostrea gigas]
Length = 480
Score = 364 bits (935), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 198/463 (42%), Positives = 292/463 (63%), Gaps = 32/463 (6%)
Query: 1 MEIVRSQRSRTNTPNDSV-------STLPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISD 53
MEIV SRT P +S L +Y+ P+ V L++FE +A++RL+VLK I +
Sbjct: 1 MEIV----SRTKRPKNSKLIKSGAEHRLQIYKVPPKDTVTLQEFEEYAVERLKVLKAIEN 56
Query: 54 ALARGKRPEEMENLV--RDLWKANMR------HPEASEDVNKDIISHFVLRLVYCRTEDL 105
A R R E N + +++ K + + SE+ D ISHF+LRL YCR+EDL
Sbjct: 57 AGIRHIRGSEDYNTLVEKEIKKTRLAKIIRTDYSTDSEEYRIDHISHFILRLAYCRSEDL 116
Query: 106 RKWFLSMETALYRYRFLLGSSEAKRALMEEFDLPCKAISRTEFENAKEKLEQVARSFDQP 165
++WFL E L+R+RFL+ ++E K+ ++ L IS E + L+ + S +
Sbjct: 117 KRWFLQQELDLFRFRFLMETAEEKQKFLKVNSLDYNPISDDEKQRV---LQDLMASAGRN 173
Query: 166 LPTADAI-FYKVPFEEVPELVAGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTN 224
TAD ++KVPF EV +LV GR+V++ +G AYV ++S+++T +R++LS+ L +T+
Sbjct: 174 STTADTNEYFKVPFTEVLDLVRGRKVFLSRGFAYVPKDDMISILITHYRAHLSQQLAMTS 233
Query: 225 RKWTSTIREQERDRLTPIVEALSMSYLGPDYSQTK-EFGEISIKDLDQLARSSFPLCMRH 283
R +E +RL P++ LS YLG DYS K G+I+ + +D L++ SFP CM++
Sbjct: 234 RALPQL---EEDNRLLPMLSGLSKRYLGQDYSSKKSNVGKITAEMIDSLSKQSFPPCMQN 290
Query: 284 LFDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRH 343
L ++ DHHLKHGGRMQ GLFLKG+GL +E+AL FW+ EF++ + ++FDK+Y+Y+IRH
Sbjct: 291 LHQSMKRDHHLKHGGRMQYGLFLKGIGLSLEEALRFWRTEFTKAMDGDKFDKQYSYNIRH 350
Query: 344 NYGKEGKRTDYTPYSCQKII-SSTPGVGDHHGCPYRHFSEENLRAALGRM-GVGSRAMED 401
NYGKEGKR DYTPYSC KII S+ PG GD+HGCP+RH ++ +L+A R+ G+ +
Sbjct: 351 NYGKEGKRADYTPYSCNKIIMSNAPGPGDNHGCPFRH-TDADLQAQKLRLQGISKDFTDK 409
Query: 402 VVDKVRNRHYQLACTLTFEAVHSS--SCDAGINHPNQYFSDSH 442
++ R+ HYQ+AC F+A HS D INHPNQYF +S
Sbjct: 410 IMKYTRDGHYQIACKYYFDATHSGVEEPDVNINHPNQYFDESQ 452
>gi|156402243|ref|XP_001639500.1| predicted protein [Nematostella vectensis]
gi|156226629|gb|EDO47437.1| predicted protein [Nematostella vectensis]
Length = 517
Score = 362 bits (929), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 199/449 (44%), Positives = 276/449 (61%), Gaps = 30/449 (6%)
Query: 21 LPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKR-----PEEMENLVRD----L 71
L +Y+ P + LE+FE A++RL+VL+ + R KR E+M + D L
Sbjct: 30 LQMYKIPPTDNISLEEFEELAIERLKVLREVETLGIRFKRESKEYKEKMSKHLSDFLPHL 89
Query: 72 WKANMRHPEAS-----EDVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSS 126
+ +NM +++ +D KD ISHF+LRL YCR+EDLR+WFL E+ L+R+RF+ +
Sbjct: 90 YISNMYSSKSTANDEYDDKRKDHISHFILRLAYCRSEDLRRWFLLQESELFRFRFV---T 146
Query: 127 EAKRALMEEFDLPCKAISRTEFENAKEKLEQVARSFDQPLPTADAI-----FYKVPFEEV 181
E + +EEF L ++S T +EK + + D DA +YKV F E
Sbjct: 147 EEEGKGVEEF-LQHNSLSYTPI-GEEEKTTFLEKLRDSGYNLTDAAVLASKYYKVHFTEA 204
Query: 182 PELVAGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTP 241
+LV R+V++ +G AY+ +VS++ FR+ LS AL +T R +E DRL P
Sbjct: 205 LDLVRSRKVFLREGSAYIPHQSLVSIITNVFRTQLSHALAVTARALPYL---EEDDRLLP 261
Query: 242 IVEALSMSYLGPDYSQTKEF--GEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGR 299
+ LS YLG DYSQ K G+I++ +D +++ SFPLCMR L LRE+HHLKHGGR
Sbjct: 262 RLSNLSRQYLGQDYSQKKNIAGGKITLDQIDAVSQKSFPLCMRQLHQNLRENHHLKHGGR 321
Query: 300 MQLGLFLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSC 359
MQ GLFLKG+GL +E++LAFW+ EF + + ++FDK+YAY+IRHNYGKEGKR DYTPYSC
Sbjct: 322 MQYGLFLKGIGLTLEESLAFWRTEFIRIMDLDKFDKQYAYNIRHNYGKEGKRADYTPYSC 381
Query: 360 QKII-SSTPGVGDHHGCPYRHFSEENLRAALGRMGVGSRAMEDVVDKVRNRHYQLACTLT 418
KII S+ PG GD HGC YRH + LR L R +G +++++ V+ HYQLACT
Sbjct: 382 MKIIMSNQPGPGDCHGCTYRHTDPDLLRQQLARHKLGKEGLDEIMKLVKETHYQLACTRF 441
Query: 419 FEAVHSSSCDAGINHPNQYFSDSHKILQP 447
FE H+ S + NHPNQYF +S K P
Sbjct: 442 FEVTHNVSGLSAFNHPNQYFEESRKGATP 470
>gi|412988029|emb|CCO19425.1| predicted protein [Bathycoccus prasinos]
Length = 500
Score = 361 bits (927), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 190/455 (41%), Positives = 280/455 (61%), Gaps = 31/455 (6%)
Query: 20 TLPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEEMENLVRDLWKANMRHP 79
+ LY P +++LE+FE +A+DR+R+L I +AL+ GK+PEE++ L+++ K+ P
Sbjct: 19 NVSLYDQPPNEDIKLEEFEKYALDRVRLLTAIENALSSGKKPEELQELIKEKTKSLKLEP 78
Query: 80 EASEDVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRF--LLGSSEAKRALMEEFD 137
++ D +SH+ LRL +CRTE LR+ FL+ E L++ RF + G+ +AK E +
Sbjct: 79 KSIADE----VSHYALRLAFCRTESLRRQFLTSEVQLFKARFREMKGADKAK---FIEHE 131
Query: 138 LPCKAISRTEFENAKEKLEQVARSFDQPLPTAD------------AIFYKVPFEEVPELV 185
L ++ EFE K++L V P + +YKV FE V +LV
Sbjct: 132 LDYNSMDSKEFEKLKDELMDVLCQARSTGPRGKDREQWMMSEHKRSKYYKVKFENVYQLV 191
Query: 186 AGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEA 245
R V + KG AYV V ++V+T+FR+ LSK L L ++W + + ER RL P++ +
Sbjct: 192 KMRDVLVKKGFAYVHESAVDAIVMTEFRAKLSKNLGLAAKRWNAFVESDERARLVPVINS 251
Query: 246 LSMSYLG-PDYSQTKEFGEIS------IKDLDQLARSSFPLCMRHLFDKLREDHHLKHGG 298
L LG DY G S K+L +LA SFPLC ++LF ++ +HHL+H G
Sbjct: 252 LRTKELGRSDYGSDNANGGPSGTGIVLNKELQRLAEESFPLCAKNLFKAVKHEHHLRHEG 311
Query: 299 RMQLGLFLKGVGLRMEDALAFWKAEFSQKVGA--ERFDKEYAYSIRHNYGKEGKRTDYTP 356
R QL L+LKG+GL +E+AL F+K EF++K G E+F+K+YAY +RH+YGKEGKR DYTP
Sbjct: 312 RRQLQLYLKGIGLPLEEALVFFKTEFTKKPGCNNEKFEKDYAYGVRHSYGKEGKRVDYTP 371
Query: 357 YSCQKIISSTPGVGDHHGCPYRHFSEENLRAALGRMGVGSRAMEDVVDKVRNRHYQLACT 416
+SC K I++ P G++HGCP++ FSEE L AAL +M + + D+V K +N+HYQLAC+
Sbjct: 372 HSCMKCIAANPSKGEYHGCPFKTFSEEALGAALSQMKIEPSKVTDIVKKAKNKHYQLACS 431
Query: 417 LTFEAVHSSS-CDAGINHPNQYFSDSHKILQPKNN 450
FEAVH + G++HPNQY+ S K+L PK N
Sbjct: 432 DVFEAVHGGEFIEGGLHHPNQYYEQSRKVLNPKTN 466
>gi|47550859|ref|NP_999947.1| DNA primase large subunit [Danio rerio]
gi|37681907|gb|AAQ97831.1| primase, polypeptide 2A, 58kDa [Danio rerio]
gi|63101257|gb|AAH95387.1| Zgc:110727 [Danio rerio]
Length = 508
Score = 361 bits (926), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 194/443 (43%), Positives = 281/443 (63%), Gaps = 23/443 (5%)
Query: 21 LPLYRYAPQLEVRLEDFEVFAMDRLRVLK-----GISDALARGKRPEEMENLVRDL---W 72
L Y P + L +FE FA++RL++LK G+S + +++E L +
Sbjct: 23 LQFYGQPPLDNISLIEFETFAVERLKLLKTVENLGVSYVKTTDQYIKKLEAEFLSLNFPF 82
Query: 73 KANM---RHPEAS---EDVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSS 126
+A + + P + E KD ISHF+LRL YC+TEDLR+WF+ E L+RYRF + SS
Sbjct: 83 RAEVDDRKVPGVTSEYEKRRKDHISHFILRLAYCQTEDLRRWFIQQEMDLFRYRFGILSS 142
Query: 127 EAKRALMEEFDLPCKAISRTEFENAKEKLEQVARSFDQPLPTADAIFYKVPFEEVPELVA 186
+ K + + +L + +S E +N ++KL + + + FY+VPF++ +LV
Sbjct: 143 KHKTEFLHKNNLKYETVSAEEKKNLRDKLINSSYGLS-GITLEEYDFYRVPFQDALDLVR 201
Query: 187 GRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEAL 246
R+VY+ G+AY+ +++V++V+ FR+ LSKAL +T R + Q +RL P++ L
Sbjct: 202 TRKVYLLAGNAYIPQNEIVTIVLNDFRTRLSKALAVTARSLPAV---QSDERLQPLLSHL 258
Query: 247 SMSYLGPDYSQTKEFGEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFL 306
S +Y+G DYS K G+IS++ +D L+ SFPLCMRHL LRE+HHL+HGGRMQ GLFL
Sbjct: 259 SHAYVGQDYSIQKNVGKISLEQIDPLSGKSFPLCMRHLHKALRENHHLRHGGRMQYGLFL 318
Query: 307 KGVGLRMEDALAFWKAEFSQ-KVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQKII-S 364
KG+GL +E A+ FW++EF + KV A++FDK YAYSIRH +GKEGKRTDYTPYSC K+I S
Sbjct: 319 KGIGLTLEQAMQFWRSEFVKGKVDADKFDKAYAYSIRHMFGKEGKRTDYTPYSCMKVILS 378
Query: 365 STPGVGDHHGCPYRHFSEENLRAALGRMGVGSRAMEDVVDKVRNRHYQLACTLTFEAVHS 424
+ P GD+HGCP+RH E L+ L + + +++ V+ HYQLAC FE HS
Sbjct: 379 NPPSQGDYHGCPFRHSDPELLKQKLQSYKIAPGGINQILELVKGMHYQLACQKYFELTHS 438
Query: 425 SSCDAG--INHPNQYFSDSHKIL 445
DAG +NHPNQYF++S K+L
Sbjct: 439 VE-DAGFSLNHPNQYFTESQKLL 460
>gi|301098023|ref|XP_002898105.1| DNA primase, putative [Phytophthora infestans T30-4]
gi|262105466|gb|EEY63518.1| DNA primase, putative [Phytophthora infestans T30-4]
Length = 468
Score = 357 bits (917), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 197/461 (42%), Positives = 279/461 (60%), Gaps = 25/461 (5%)
Query: 1 MEIVRSQRSRTNTPNDSVSTLPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKR 60
M+ V + R R P +S L LY AP +EV LE FE FA+DRL VLK + + R +
Sbjct: 1 MQNVGNSRRREQLPRHGLSMLSLYNEAPLVEVSLEQFEEFAIDRLHVLKAVENYRLRSVQ 60
Query: 61 PEEMENLVRDLWKANM--------RHPEASEDVNKDIISHFVLRLVYCRTEDLRKWFLSM 112
++ E + +M R +A +D KD++SHF LR+ +C+TE+LR+WFL+
Sbjct: 61 MKDREGRLEKTLNKHMPLRSAAPRRTGQADDDTAKDVLSHFFLRMAFCQTEELRRWFLTQ 120
Query: 113 ETALYRYRFLLGSSEAKRALMEEFDLPCKAISRTEFENAKEKLEQVARSFD-----QPLP 167
E+ L+RYR + E K M++ L + + E E + KL+ V S D QPLP
Sbjct: 121 ESTLFRYRLDKLTREEKIQFMKQNGLSYEEATMKEIEARQSKLKAVRDSNDFKVRGQPLP 180
Query: 168 TADAIFYKVPFEEVPELVAGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKW 227
++KVPF E +LVA RRVYI G A+V VVS++ FR+NLSK L RK+
Sbjct: 181 A----YFKVPFTEALDLVATRRVYIEAGTAFVPFEHVVSILFAAFRANLSKELSGAFRKY 236
Query: 228 TSTIREQERDRLTPIVEALSMSYLGPDYSQTKEFG-EISIKD--LDQLARSSFPLCMRHL 284
++ ++ +RL P++ L+ ++ DYS T G E +I+ +D LA +S PLCMR L
Sbjct: 237 NRSLVSKD-ERLAPVLSNLAKHHIDADYSSTPVPGSENAIRPDMIDGLAATSMPLCMRSL 295
Query: 285 FDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHN 344
L+ +HHLK GR Q GLFLKG+GL+++DA+A+WK EF +K+ + F+K+YAY+IRHN
Sbjct: 296 HKGLKLNHHLKFAGRQQYGLFLKGIGLQLDDAIAYWKQEFCKKMSVDDFNKKYAYNIRHN 355
Query: 345 YGKEGKRTDYTPYSCQKIISS-TPGVGDHHGCPYRHFSEENLRAALGRMGVGSRAMEDVV 403
YGKEGKR DY P +C +II+ P G++HGCP+RHF +E+LR AL GV ++++
Sbjct: 356 YGKEGKRKDYAPSNCMRIITGDPPKNGEYHGCPFRHFEQEHLRKAL--QGVSEGDKQEIL 413
Query: 404 DKVRNRHYQLACTLTFEAVH-SSSCDAGINHPNQYFSDSHK 443
N HYQ+AC FEA H S D INHPN Y+ +S K
Sbjct: 414 SLAENHHYQIACKKYFEATHPGSDPDVLINHPNGYYEESRK 454
>gi|213511985|ref|NP_001133638.1| DNA primase large subunit [Salmo salar]
gi|209154776|gb|ACI33620.1| DNA primase large subunit [Salmo salar]
Length = 515
Score = 356 bits (914), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 197/444 (44%), Positives = 272/444 (61%), Gaps = 25/444 (5%)
Query: 21 LPLYRYAPQLEVRLEDFEVFAMDRLRVLK-----GISDALARGKRPEEMENLVRDL---- 71
L Y P + L +FE FA+DRL++LK G+S + ++++ +L
Sbjct: 24 LQFYGQPPIENISLSEFETFAVDRLKLLKTVENLGVSYVKTSDQYTKKLDAEFSNLNFPY 83
Query: 72 -WKANMRHPEAS----EDVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSS 126
+A+ R P+ E KD ISHF+LRL YC+TEDLR+WF+ E L+RYRF S
Sbjct: 84 KIEADDRKPQTGPSEYEKRRKDHISHFILRLAYCQTEDLRRWFIQQEIDLFRYRFNDLGS 143
Query: 127 EAKRALMEEFDLPCKAISRTEFENAKEKLEQVARSFDQPLPTADAI-FYKVPFEEVPELV 185
+ R ++ +L IS E N +KL + SF T D FYKVPF++ +LV
Sbjct: 144 KNIREFLQYNNLHYHTISIDEKRNLMDKL--INSSFAVSGSTVDCQDFYKVPFQDALDLV 201
Query: 186 AGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEA 245
R+VY+ G+ Y+ +V++V+ FR+ LSKAL LT R + Q +RL P++
Sbjct: 202 RTRKVYLKGGYVYIPHQDIVTIVLNDFRTRLSKALALTARSLPAV---QSDERLQPLLNH 258
Query: 246 LSMSYLGPDYSQTKEFGEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLF 305
LS +Y+G DYS K G+IS++ +D L+ S+PLCMR L LR+ HHL+HGGRMQ GLF
Sbjct: 259 LSHAYVGQDYSIQKSIGKISLEQIDPLSAKSYPLCMRQLHRGLRDSHHLRHGGRMQYGLF 318
Query: 306 LKGVGLRMEDALAFWKAEFSQ-KVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQKII- 363
LKG+GL ++ AL FW++EF + KV A++FDK YAYSIRH +GKEGKRTDYTPYSC K+I
Sbjct: 319 LKGIGLTLDQALQFWRSEFVKGKVDADKFDKAYAYSIRHMFGKEGKRTDYTPYSCMKVIL 378
Query: 364 SSTPGVGDHHGCPYRHFSEENLRAALGRMGVGSRAMEDVVDKVRNRHYQLACTLTFEAVH 423
S+ P GD HGCP+RH E L+ L V + +++ V+ HYQLAC FE +H
Sbjct: 379 SNPPSQGDQHGCPFRHSDPELLKQKLQSYKVSPSGISQILELVKGMHYQLACQKYFELMH 438
Query: 424 SSSCDAG--INHPNQYFSDSHKIL 445
S D+G +NHPNQYF +S K+L
Sbjct: 439 SIE-DSGFSLNHPNQYFMESQKLL 461
>gi|449283614|gb|EMC90219.1| DNA primase large subunit [Columba livia]
Length = 512
Score = 356 bits (913), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 196/442 (44%), Positives = 262/442 (59%), Gaps = 18/442 (4%)
Query: 17 SVSTLPLYRYAPQLEVRLEDFEVFAMDRLRVLK-----GISDALARGKRPEEMENLVRDL 71
S +L Y P + L +FE A+DRL++LK G+S + ++E+
Sbjct: 23 SPHSLQFYLEPPTENISLAEFESLAIDRLKLLKTVENLGVSYVKNSDQYNSKLESDEILF 82
Query: 72 WKANMRHPEASED----VNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSE 127
K H ++D KD ISHF+LRL YC++E+LR+WFL E L+RYRF +
Sbjct: 83 LKLKFSHFALTDDDYEARRKDHISHFILRLAYCQSEELRRWFLQQEMDLFRYRFSQLTDS 142
Query: 128 AKRALMEEFDLPCKAISRTEFENAKEKLEQVARSFDQPLPTADAIFYKVPFEEVPELVAG 187
+ ME DL +AIS +L F + +FYKV + +L
Sbjct: 143 LMQKFMEHVDLSFEAISEDLKNELASELSTSTPGFTMS-KVKEQMFYKVGLADAVDLFRA 201
Query: 188 RRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEALS 247
RRV+I G AYV +V++V+ +R+ LSKAL LT R S Q +RL P++ LS
Sbjct: 202 RRVFIKDGFAYVPFKDIVAIVLNNYRAKLSKALALTARSLPSI---QSDERLQPLLNHLS 258
Query: 248 MSYLGPDYSQTKEFGEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLK 307
SY+GPDYS K G+IS++ +D L+ SFPLCMR L LR++HHL+HGGRMQ GLFLK
Sbjct: 259 HSYVGPDYSVQKNTGKISLEQIDALSVKSFPLCMRQLHKALRDNHHLRHGGRMQYGLFLK 318
Query: 308 GVGLRMEDALAFWKAEFSQ-KVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQKII-SS 365
G+GL +E AL FWK EF + KV A++FDK YAYSIRHNYGKEGKRTDYTPYSC KII S+
Sbjct: 319 GIGLTLEQALEFWKKEFIRGKVDADKFDKGYAYSIRHNYGKEGKRTDYTPYSCMKIIMSN 378
Query: 366 TPGVGDHHGCPYRHFSEENLRAALGRMGVGSRAMEDVVDKVRNRHYQLACTLTFEAVHSS 425
P GD+HGCP+RH E L+ L + + +++ V+ HYQLAC FE H
Sbjct: 379 PPSQGDYHGCPFRHSDPELLKQKLQSYKIPPSGITQILELVKGMHYQLACQKYFELTHDV 438
Query: 426 SCDAG--INHPNQYFSDSHKIL 445
D G +NHPNQYF++S ++L
Sbjct: 439 D-DIGFSLNHPNQYFTESQRLL 459
>gi|432904026|ref|XP_004077247.1| PREDICTED: DNA primase large subunit-like [Oryzias latipes]
Length = 497
Score = 355 bits (912), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 198/465 (42%), Positives = 273/465 (58%), Gaps = 25/465 (5%)
Query: 1 MEIVRSQRSRTNTPNDSVSTLPLYRYA-PQLE-VRLEDFEVFAMDRLRVLK-----GISD 53
M+ R R P + PL Y P LE + L +FE FA++RL++LK G+S
Sbjct: 1 MQFQRRHRKLGTNPQSELYLQPLQFYGEPPLENISLAEFETFAVERLKLLKTVENLGVSY 60
Query: 54 ALARGKRPEEMENLVRDLW---------KANMRHPEASEDVNKDIISHFVLRLVYCRTED 104
+ +M+N +R L K + P E KD ISHF+LRL YC+TED
Sbjct: 61 VKHSSQYKLKMDNELRLLHFPYRPDTNDKKPLTGPSEFEKRRKDHISHFILRLAYCQTED 120
Query: 105 LRKWFLSMETALYRYRFLLGSSEAKRALMEEFDLPCKAISRTEFENAKEKLEQVARSFDQ 164
LR+WF+ E L+RYRF + K + + +L +S E +KL + S+
Sbjct: 121 LRRWFIQQEVDLFRYRFTDLPPQQKLEFLHKNNLKYNTLSDKEKNELSDKL--LMSSYSV 178
Query: 165 PLPTADAI-FYKVPFEEVPELVAGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILT 223
T + + FYKVPF++ +LV R+VY+ G A+V +V++V+ FR+ LSKAL LT
Sbjct: 179 SGVTVEKLEFYKVPFQDALDLVRSRKVYLKAGFAFVPQQDIVTIVLNDFRTRLSKALALT 238
Query: 224 NRKWTSTIREQERDRLTPIVEALSMSYLGPDYSQTKEFGEISIKDLDQLARSSFPLCMRH 283
R + +RL P++ LS +YLG DYS K G+IS++ +D L+ SFPLCMR
Sbjct: 239 ARSLPAV---HSDERLHPLLNHLSHAYLGQDYSIQKNVGKISLEQIDSLSGKSFPLCMRQ 295
Query: 284 LFDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWKAEFSQ-KVGAERFDKEYAYSIR 342
L LRE+HHL+HGGRMQ GLFLKG+G+ +E AL FW++EF + KV A++FDK YAY IR
Sbjct: 296 LHQALRENHHLRHGGRMQYGLFLKGIGISLEQALQFWRSEFIRGKVDADKFDKAYAYGIR 355
Query: 343 HNYGKEGKRTDYTPYSCQKII-SSTPGVGDHHGCPYRHFSEENLRAALGRMGVGSRAMED 401
H YGKEGKR DYTPYSC K+I S+ P GDHHGCP+RH E L+ L V ++
Sbjct: 356 HMYGKEGKRADYTPYSCMKVILSNPPSQGDHHGCPFRHSDPELLKQKLQFYKVSPSSITQ 415
Query: 402 VVDKVRNRHYQLACTLTFEAVHS-SSCDAGINHPNQYFSDSHKIL 445
+++ V+ H+QLAC FE H+ ++HPNQYF +S K L
Sbjct: 416 IMELVKGMHFQLACQKYFEVTHNVEDSSFSLSHPNQYFIESQKAL 460
>gi|348682874|gb|EGZ22690.1| hypothetical protein PHYSODRAFT_330433 [Phytophthora sojae]
Length = 467
Score = 355 bits (910), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 202/466 (43%), Positives = 280/466 (60%), Gaps = 26/466 (5%)
Query: 1 MEIVRSQRSRTNTPNDSVSTLPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKR 60
M+ V + R R P +S L LY AP +EV LE FE FA+DRL VLK + + R +
Sbjct: 1 MQNVGNSR-RQQAPRQGLSMLSLYNEAPLVEVSLEQFEEFAIDRLHVLKAVENYRLRSVQ 59
Query: 61 PEEMEN-LVRDLWK-------ANMRHPEASEDVNKDIISHFVLRLVYCRTEDLRKWFLSM 112
++ E L + L K A MR +A D KD++SHF LR+ +C+TE+LR+WFL+
Sbjct: 60 MKDREGRLEKTLNKHMPLRAAAPMRAGQAENDATKDVLSHFFLRMAFCQTEELRRWFLTQ 119
Query: 113 ETALYRYRFLLGSSEAKRALMEEFDLPCKAISRTEFENAKEKLEQVARSFD-----QPLP 167
E+ L+RYR + E K M++ L + E E + KL+ V + D PLP
Sbjct: 120 ESTLFRYRLDKLTREEKILFMKQNGLSYDEATLKEIEARQSKLKAVRDANDPKVRGHPLP 179
Query: 168 TADAIFYKVPFEEVPELVAGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKW 227
++KVPF E +LVA RRVYI G AYV VVS++ FR+NLSK L RK+
Sbjct: 180 A----YFKVPFTEALDLVATRRVYIEAGTAYVPFEHVVSILFAAFRANLSKELSGAFRKY 235
Query: 228 TSTIREQERDRLTPIVEALSMSYLGPDYSQTKEFG-EISIKD--LDQLARSSFPLCMRHL 284
++ ++ DRL P++ L+ ++ DYS T G E +I+ +D LA +S PLCMR L
Sbjct: 236 NRSLISKD-DRLAPVLSNLAKHHIDADYSATPVPGSENAIRPDMIDGLAGTSMPLCMRSL 294
Query: 285 FDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHN 344
L+ +HHLK GR Q GLFLKG+GL+++DA+A+WK EF +K+ + F+K+YAY+IRHN
Sbjct: 295 HKGLKLNHHLKFAGRQQYGLFLKGIGLQLDDAIAYWKQEFCKKMSVDDFNKKYAYNIRHN 354
Query: 345 YGKEGKRTDYTPYSCQKIISS-TPGVGDHHGCPYRHFSEENLRAALGRMGVGSRAMEDVV 403
YGKEGKR DY P +C +II+ P G++HGCP+RH+ +E+LR AL GV ++++
Sbjct: 355 YGKEGKRKDYAPSNCMRIITGDPPKNGEYHGCPFRHYEQEHLRKAL--QGVPEGDQQEIL 412
Query: 404 DKVRNRHYQLACTLTFEAVH-SSSCDAGINHPNQYFSDSHKILQPK 448
N HYQ+AC FEA H S D INHPN YF +S K K
Sbjct: 413 SLAENHHYQIACKKYFEATHPGSDPDVLINHPNGYFEESRKYYAAK 458
>gi|61097957|ref|NP_001012898.1| DNA primase large subunit [Gallus gallus]
gi|53127816|emb|CAG31237.1| hypothetical protein RCJMB04_3o11 [Gallus gallus]
gi|60098897|emb|CAH65279.1| hypothetical protein RCJMB04_14m23 [Gallus gallus]
Length = 508
Score = 353 bits (907), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 198/439 (45%), Positives = 267/439 (60%), Gaps = 21/439 (4%)
Query: 20 TLPLYRYAPQLEVRLEDFEVFAMDRLRVLK-----GISDALARGKRPEEMENLVRDLWKA 74
+L Y+ P + L +FE FA+DRLR+LK G+S + ++E +R L
Sbjct: 25 SLQFYQEPPTESISLAEFESFAVDRLRLLKVVENLGVSYVKSGDAYKTKLEAELRKLKFP 84
Query: 75 NMRHPEASEDVN-KDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKRALM 133
E D KD ISHF+LRL YC++E+LR+WFL E L+RYRF + ++ +
Sbjct: 85 YRALAEDDYDARRKDHISHFILRLAYCQSEELRRWFLQQEMDLFRYRFHELTDSLRQKFL 144
Query: 134 EEFDLPCKAISRTEFENAKEKLEQVARSFDQPLPTA---DAIFYKVPFEEVPELVAGRRV 190
+ +L +AIS E+ K +L L + + +FYKV + +L RRV
Sbjct: 145 DHVNLSFEAIS----EDLKNELSNELYMSTPGLSMSKVKEQMFYKVGLSDAVDLFRARRV 200
Query: 191 YIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEALSMSY 250
+I G A+V + + ++V+ +R +LSKAL LT R S Q +RL P++ LS SY
Sbjct: 201 FIKDGFAFVPLKDIDAIVLNNYRKSLSKALALTARSLPSI---QSDERLQPLLNHLSHSY 257
Query: 251 LGPDYSQTKEFGEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVG 310
+GPDYS K G+IS++ +D L+ SFPLCMR L LRE+HHL+HGGRMQ GLFLKG+G
Sbjct: 258 VGPDYSVQKNTGKISLEHIDALSVKSFPLCMRQLHKALRENHHLRHGGRMQYGLFLKGIG 317
Query: 311 LRMEDALAFWKAEFSQ-KVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQKII-SSTPG 368
L +E AL FWK EF + KV A++FDK YAYSIRHNYGKEGKRTDYTPYSC KII S+ P
Sbjct: 318 LTLEQALEFWKKEFIKGKVDADKFDKGYAYSIRHNYGKEGKRTDYTPYSCMKIIMSNPPS 377
Query: 369 VGDHHGCPYRHFSEENLRAALGRMGVGSRAMEDVVDKVRNRHYQLACTLTFEAVHSSSCD 428
GD+HGCP+RH E L+ L V + +++ V+ HYQLAC FE H D
Sbjct: 378 QGDYHGCPFRHSDPELLKQKLQSYKVPPSGVTQILELVKGMHYQLACQKYFELTHDVD-D 436
Query: 429 AG--INHPNQYFSDSHKIL 445
G +NHPNQYF++S +IL
Sbjct: 437 IGFSLNHPNQYFAESQRIL 455
>gi|196008831|ref|XP_002114281.1| hypothetical protein TRIADDRAFT_57927 [Trichoplax adhaerens]
gi|190583300|gb|EDV23371.1| hypothetical protein TRIADDRAFT_57927 [Trichoplax adhaerens]
Length = 536
Score = 352 bits (902), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 197/465 (42%), Positives = 279/465 (60%), Gaps = 46/465 (9%)
Query: 17 SVSTLPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALAR-GKRPEEMENLVRDLWKA- 74
+ TL Y P + LEDFE FA+DRL+VLKGI +AL R K E E + L+KA
Sbjct: 21 ATHTLQFYSKPPIDNISLEDFERFAIDRLKVLKGIENALLRYQKNSPEYEREMTKLYKAF 80
Query: 75 --NMRHPE------ASEDVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSS 126
N+ E ++++ KD ISHF+LRL YCR+E+LR+WFL E L++YRF S+
Sbjct: 81 LPNVARQELDNADVINQEIRKDHISHFILRLAYCRSENLRRWFLMHEMELFKYRFNQESA 140
Query: 127 EAKRALMEEFDLPCKAISRTEFENAKEKLEQVARSFDQPLPTADAI----FYKVPFEEVP 182
+ ++ +L I E + + +L P+ A+ +YKVPF E
Sbjct: 141 GGIDSFLKANNLEYTPIPENEKMSIRTELIH-----SNPMQNGAAVESKDYYKVPFTEAL 195
Query: 183 ELVAGRRVYI-----------------HKGHAYVAMHQVVSLVVTQFRSNLSKALILTNR 225
+LV R++Y+ + G AYV +V++V++ FR+NLS AL + ++
Sbjct: 196 DLVKLRKIYLKNVGIHLLFSALVQHILNNGQAYVPRDDLVTIVISVFRANLSHALAMASK 255
Query: 226 KWTSTIREQERDRLTPIVEALSMSYLGPDYS-QTKEFGEISIKDLDQLARSSFPLCMRHL 284
+E DR+ P + LS Y+G DYS Q G++ D+D L+ SFPLCM+ L
Sbjct: 256 ALPFL---EEDDRILPKLSNLSRQYIGKDYSAQPSLSGQVVAGDIDGLSAKSFPLCMKQL 312
Query: 285 FDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWKAEFSQ--KVGAERFDKEYAYSIR 342
+ LRE+HHL HGGRMQ GLFLKG+GL +E+AL FW+ EF++ + A++FDK+YAY+IR
Sbjct: 313 HESLRENHHLTHGGRMQYGLFLKGIGLSLEEALRFWREEFTKGPNIDADKFDKQYAYNIR 372
Query: 343 HNYGKEGKRTDYTPYSCQKII-SSTPGVGDHHGCPYRHFSEENLRAALGRMGVGSRAMED 401
HNYGKEGKRT+YTPYSC KII S+ PG D+HGCP+RH + LR L G+ S ++
Sbjct: 373 HNYGKEGKRTNYTPYSCMKIIMSNPPGPRDYHGCPFRHTDPDLLRQRLLSNGLSSEGAKE 432
Query: 402 VVDKVRNRHYQLACTLTFEAVHSSSCDAG--INHPNQYFSDSHKI 444
+ + + HYQLAC +E VH+ S DAG INHPN+YF +S ++
Sbjct: 433 ITELAKGSHYQLACVRYYELVHNVS-DAGFSINHPNEYFEESQRV 476
>gi|348507270|ref|XP_003441179.1| PREDICTED: DNA primase large subunit-like [Oreochromis niloticus]
Length = 513
Score = 351 bits (901), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 192/443 (43%), Positives = 264/443 (59%), Gaps = 23/443 (5%)
Query: 21 LPLYRYAPQLEVRLEDFEVFAMDRLRVLK-----GISDALARGKRPEEMENLVRDLW--- 72
L Y P + L +FE FA++RL++LK G+S ++E ++ L
Sbjct: 23 LQFYGQPPLENISLSEFETFAVERLKLLKTVENLGVSHVKLTDLYISKLEKELKALNFPY 82
Query: 73 ------KANMRHPEASEDVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSS 126
K + P E KD ISHF+LRL YC+TEDLR+WF+ E L+R+RF
Sbjct: 83 RPDADDKKSQSGPTEYEKRRKDHISHFILRLAYCQTEDLRRWFIQQEVDLFRFRFNDLDP 142
Query: 127 EAKRALMEEFDLPCKAISRTEFENAKEKLEQVARSFD-QPLPTADAIFYKVPFEEVPELV 185
+ + + + +L IS E K++L + SF + + FYKVPF++ +LV
Sbjct: 143 KQQLEFLHKNNLRYDTISSEEKLKLKDQL--INSSFGVSGITVMEHEFYKVPFQDALDLV 200
Query: 186 AGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEA 245
R+VY+ +G+AY+ +V++V+ FR+ LSKAL LT R + +RL P++
Sbjct: 201 RLRKVYLKQGYAYIPHQDIVTIVLNDFRTRLSKALALTARSLPAV---HSDERLQPLLNH 257
Query: 246 LSMSYLGPDYSQTKEFGEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLF 305
LS +Y+G DYS K G+IS+ +D L+ SFPLCMR L LRE+HHL+HGGRMQ GLF
Sbjct: 258 LSHAYVGQDYSIQKNVGKISLDQIDSLSGKSFPLCMRQLHQSLRENHHLRHGGRMQYGLF 317
Query: 306 LKGVGLRMEDALAFWKAEFSQ-KVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQKII- 363
LKG+GL +E AL FWK EF + KV A++FDK YAYSIRH +GKEGKRTDYTPYSC K+I
Sbjct: 318 LKGIGLSLEQALQFWKMEFIRGKVDADKFDKAYAYSIRHMFGKEGKRTDYTPYSCMKVIL 377
Query: 364 SSTPGVGDHHGCPYRHFSEENLRAALGRMGVGSRAMEDVVDKVRNRHYQLACTLTFEAVH 423
S+ P GDHHGCP+RH E L+ L V + +++ V+ HYQLAC FE H
Sbjct: 378 SNPPSQGDHHGCPFRHSDPELLKQKLQVYKVSPSGINQILELVKGMHYQLACQKYFELTH 437
Query: 424 S-SSCDAGINHPNQYFSDSHKIL 445
+ +NHPNQYF +S K+L
Sbjct: 438 NIEDSSFSLNHPNQYFLESQKLL 460
>gi|390335784|ref|XP_795147.3| PREDICTED: DNA primase large subunit-like [Strongylocentrotus
purpuratus]
Length = 468
Score = 351 bits (900), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 188/437 (43%), Positives = 269/437 (61%), Gaps = 18/437 (4%)
Query: 21 LPLYRYAPQLEVRLEDFEVFAMDRLRVLK-----GISDALARGKRPEEMENLVRDLWKAN 75
L YR P + L +FE A RL VLK GI + E M+ ++ L
Sbjct: 26 LLFYRIPPIENISLSEFEELAKRRLAVLKHVESVGIRHVKGSEEYNERMDKELKKLMPIA 85
Query: 76 MRHPEASEDV----NKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKRA 131
R + ED+ D ISHF+LRL YCR+EDLR+WF+ E L+RYRFL SE+
Sbjct: 86 HR-KMSGEDLAAHKRDDRISHFILRLAYCRSEDLRRWFIQQELDLFRYRFLREYSESVTQ 144
Query: 132 LMEEFDLPCKAISRTEFENAKEKLEQVARSFDQPLPTADAIFYKVPFEEVPELVAGRRVY 191
+ E L +S E + EKL + + + A F+KVPF E +LV GR+V+
Sbjct: 145 FLAENKLHYTPVSNNEKDALNEKLVRSSPGISASM-MAHTDFFKVPFTEALDLVRGRKVF 203
Query: 192 IHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEALSMSYL 251
I KG+A+V ++VS+V+T FRS+LS++ +T R +E RL P++ LS YL
Sbjct: 204 IQKGYAFVPHSELVSIVITAFRSHLSQSSAITARGIPHL---EEDGRLLPMLNNLSKQYL 260
Query: 252 GPDYSQTKEFGE--ISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGV 309
G DYS +K G I+++D+++ ++ SFPLCMR L L+E HHL+HGGRMQ GLFLKG+
Sbjct: 261 GQDYSNSKRSGNSAINLEDIEKYSKQSFPLCMRQLHMSLKEHHHLRHGGRMQYGLFLKGI 320
Query: 310 GLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQKII-SSTPG 368
G+ +E A+ FW++EF++ + ++FDK+Y+Y+IRHNYGKEGKR +YTPYSC K+I S+ PG
Sbjct: 321 GMTLEQAMTFWRSEFTRIMDMDKFDKQYSYNIRHNYGKEGKRANYTPYSCMKVIMSNAPG 380
Query: 369 VGDHHGCPYRHFSEENLRAALGRMGVGSRAMEDVVDKVRNRHYQLACTLTFEAVHS-SSC 427
GD+HGCP+RH L+ L G+ + ++ V++ V+ HYQLACT FE H+
Sbjct: 381 QGDYHGCPFRHTDGALLKQRLSTFGLTQQGVDQVMELVKGHHYQLACTRYFELSHNVPET 440
Query: 428 DAGINHPNQYFSDSHKI 444
+ +NHPNQYF +S ++
Sbjct: 441 EFLLNHPNQYFEESLRV 457
>gi|118601788|ref|NP_001073062.1| DNA primase large subunit [Bos taurus]
gi|117306709|gb|AAI26658.1| Primase, DNA, polypeptide 2 (58kDa) [Bos taurus]
gi|296474574|tpg|DAA16689.1| TPA: DNA primase polypeptide 2 [Bos taurus]
Length = 506
Score = 351 bits (900), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 186/435 (42%), Positives = 269/435 (61%), Gaps = 13/435 (2%)
Query: 20 TLPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISD-ALARGKRPEEMEN-LVRDLWKANMR 77
+L Y P V L +FE A+DR+++LK + + L+ K E+ ++ L +L K
Sbjct: 25 SLQFYLQPPSGNVSLTEFETLAIDRVKLLKSVENLGLSYMKGTEQYQSKLEAELRKLKFS 84
Query: 78 HPEASEDV----NKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKRALM 133
+ E+ ED KD ISHF+LRL YC++EDLR+WF+ E L R+RF + + ++ +
Sbjct: 85 YRESLEDEYEPRRKDHISHFILRLAYCQSEDLRRWFIQQEMDLLRFRFSILPKDKIQSFL 144
Query: 134 EEFDLPCKAISRTEFENAKEKLEQVARSFDQPLPTADAIFYKVPFEEVPELVAGRRVYIH 193
++ L +AIS E ++ + + +F +++ YK+PF E +L GR+VY+
Sbjct: 145 KDSHLQFEAISDEEKTVREQDIIASSSTFGGAQLDPESV-YKIPFAEALDLFRGRKVYLE 203
Query: 194 KGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEALSMSYLGP 253
G AYV +V++++ +FR+ LSKAL LT R + Q +RL P++ LS SY G
Sbjct: 204 NGFAYVPHKDIVAIILNEFRTKLSKALALTARSLPAV---QSDERLQPLLNHLSHSYTGQ 260
Query: 254 DYSQTKEFGEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRM 313
DYS G+IS+ +D L+ SFP CMR L LRE+HHL+HGGRMQ GLFLKG+GL +
Sbjct: 261 DYSTQGNAGKISLDQIDSLSTKSFPPCMRQLHKALRENHHLRHGGRMQYGLFLKGIGLTL 320
Query: 314 EDALAFWKAEFSQ-KVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQKII-SSTPGVGD 371
E AL FWK EF + + ++FDK Y+Y+IRH+YGKEGKRTDYTPYSC KII ++TPG GD
Sbjct: 321 EQALQFWKQEFIRGNMDPDKFDKGYSYNIRHSYGKEGKRTDYTPYSCMKIILTNTPGQGD 380
Query: 372 HHGCPYRHFSEENLRAALGRMGVGSRAMEDVVDKVRNRHYQLACTLTFEAVHS-SSCDAG 430
+HGCP+RH E LR L + + ++D V+ HYQ+AC FE H+ C
Sbjct: 381 YHGCPFRHSDPELLRQKLQAYKIPPAGISQILDLVKGTHYQVACQKFFEMTHNVDDCGFS 440
Query: 431 INHPNQYFSDSHKIL 445
++HPNQ+F +S +IL
Sbjct: 441 LSHPNQFFFESQRIL 455
>gi|327261407|ref|XP_003215522.1| PREDICTED: LOW QUALITY PROTEIN: DNA primase large subunit-like
[Anolis carolinensis]
Length = 511
Score = 350 bits (899), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 194/454 (42%), Positives = 271/454 (59%), Gaps = 15/454 (3%)
Query: 2 EIVRSQRSRTNTPNDSVSTLPLYRYAPQLEVRLEDFEVFAMDRLRVLK-----GISDALA 56
++ R + SR + +L Y P + L +FE FA+DRL++LK G+S
Sbjct: 10 KVPRYKVSRLGDKEEYPFSLQFYLTPPIENISLIEFESFAVDRLKLLKVVENLGVSMIKG 69
Query: 57 RGKRPEEMENLVRDLWKANMRHPEASEDVN-KDIISHFVLRLVYCRTEDLRKWFLSMETA 115
+++E ++ L E D KD ISHF+LRL YC+TE+LR+WF+ E
Sbjct: 70 TALYNQKLEAELKTLQFPYHALLENDYDRRRKDHISHFILRLAYCQTEELRRWFIQQELD 129
Query: 116 LYRYRFLLGSSEAKRALMEEFDLPCKAISRTEFENAKEKLEQVARSFDQPLPTADAIFYK 175
L+RYRF S E + + +L ++ TE E L F++ T +A FY
Sbjct: 130 LFRYRFTQLSEELTKRFLAYVNLAYDSVLETEKETIGGDLRSATPGFNEADVTNNA-FYL 188
Query: 176 VPFEEVPELVAGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQE 235
VPF + +LV +RVY + G+AYV + +++ +R+ LSKAL +T R Q
Sbjct: 189 VPFSDSVDLVRVKRVYFYGGYAYVPQQDFLVILLNNYRTRLSKALAITARSLPII---QT 245
Query: 236 RDRLTPIVEALSMSYLGPDYSQTKEFGEISIKDLDQLARSSFPLCMRHLFDKLREDHHLK 295
+RL P++ LS +Y+GPDYS K G+IS++ +D L+ SFP CMR L LRE+HHL+
Sbjct: 246 DERLQPLLSHLSHAYVGPDYSIEKNIGKISLEQIDALSVKSFPPCMRQLHKALRENHHLR 305
Query: 296 HGGRMQLGLFLKGVGLRMEDALAFWKAEFSQ-KVGAERFDKEYAYSIRHNYGKEGKRTDY 354
HGGRMQ GLFLKG+GL +E AL FWK EF + K+ A++FDK YAY+IRH+YGKEGKRTDY
Sbjct: 306 HGGRMQYGLFLKGIGLTLEQALQFWKREFIKGKLDADKFDKGYAYNIRHSYGKEGKRTDY 365
Query: 355 TPYSCQKII-SSTPGVGDHHGCPYRHFSEENLRAALGRMGVGSRAMEDVVDKVRNRHYQL 413
TP+SC KII S+ PG GD+HGCP+RH E L+ L + + ++D V+ HYQ+
Sbjct: 366 TPFSCMKIIMSNPPGQGDYHGCPFRHSDPELLKQKLQSYKIPPTGISQILDLVKGMHYQV 425
Query: 414 ACTLTFEAVHSSSCDAG--INHPNQYFSDSHKIL 445
AC FE H S D G +NHPNQYF +S ++L
Sbjct: 426 ACQKYFELTHDVS-DIGFSLNHPNQYFVESQQLL 458
>gi|73973167|ref|XP_532185.2| PREDICTED: DNA primase large subunit isoform 1 [Canis lupus
familiaris]
Length = 509
Score = 349 bits (896), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 187/437 (42%), Positives = 269/437 (61%), Gaps = 15/437 (3%)
Query: 20 TLPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISD---ALARGKRP--EEMENLVRDLWKA 74
+L Y P + L +FE A+DR+++LK + + + +G P ++EN +R L K
Sbjct: 25 SLQFYLEPPSENISLIEFESLAIDRVKLLKAVENLGVSYVKGIEPYQSKLENEIRRL-KF 83
Query: 75 NMRHP--EASEDVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKRAL 132
+ R + E KD ISHF+LRL YC++EDLR+WF+ E L R+RF + + R
Sbjct: 84 SFRESLEDEYEPRRKDHISHFILRLAYCQSEDLRRWFIQQEMDLLRFRFSILPKDKIRNF 143
Query: 133 MEEFDLPCKAISRTEFENAKEKLEQVARSF-DQPLPTADAIFYKVPFEEVPELVAGRRVY 191
+++ L +AIS E ++++ + S L YK+PF + +L GR+VY
Sbjct: 144 LKDSHLQFEAISDDEKSLREQEILASSPSLCGSKLDLDSESVYKIPFADALDLFRGRKVY 203
Query: 192 IHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEALSMSYL 251
+ G AYV + +V++V+ +FR+ LSKAL LT R + Q +RL P++ LS SY
Sbjct: 204 LEGGFAYVPLRDIVAIVLNEFRAKLSKALALTARSLPAV---QSDERLQPLLNHLSHSYT 260
Query: 252 GPDYSQTKEFGEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGL 311
G DYS K G+IS+ +D L+ SFP CMR L LRE+HHL+HGGRMQ GLFLKG+GL
Sbjct: 261 GQDYSIQKNAGKISLDQIDSLSTKSFPPCMRQLHKALRENHHLRHGGRMQYGLFLKGIGL 320
Query: 312 RMEDALAFWKAEFSQ-KVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQKII-SSTPGV 369
+E AL FWK EF + K+ ++FDK YAY+IRH++GKEGKRTDYTP+SC KII ++ PG
Sbjct: 321 TLEQALQFWKQEFIRGKMDPDKFDKGYAYNIRHSFGKEGKRTDYTPFSCLKIILTNPPGQ 380
Query: 370 GDHHGCPYRHFSEENLRAALGRMGVGSRAMEDVVDKVRNRHYQLACTLTFEAVHS-SSCD 428
GD+HGCP+RH E L+ L + + ++D V+ HYQ+AC FE +H+ C
Sbjct: 381 GDYHGCPFRHSDPELLKQKLQSYKISPAGINQILDLVKGTHYQVACQKYFEMIHNVDDCG 440
Query: 429 AGINHPNQYFSDSHKIL 445
+NHPNQ+F +S +IL
Sbjct: 441 FSLNHPNQFFFESQRIL 457
>gi|47228918|emb|CAG09433.1| unnamed protein product [Tetraodon nigroviridis]
Length = 511
Score = 349 bits (896), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 187/441 (42%), Positives = 258/441 (58%), Gaps = 22/441 (4%)
Query: 23 LYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEEMENLVRDLWKANMRHPEAS 82
Y P + L +FE FA++RL++LK + + E + N+ P S
Sbjct: 25 FYAQPPLENISLNEFETFAVERLKLLKTVETLGVSYVKLSEQYQKKLETESKNLNFPYRS 84
Query: 83 EDVNKDI---------------ISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSE 127
E +K I ISHF+LRL YC+TEDLR+WF+ E L+RYRF S+
Sbjct: 85 ETDDKKIPSGGLSESEKRRKDHISHFILRLAYCQTEDLRRWFIQQEVDLFRYRFSELHSK 144
Query: 128 AKRALMEEFDLPCKAISRTEFENAKEKLEQVARSFDQPLPTADAIFYKVPFEEVPELVAG 187
K + +L AIS E + + +L + + + FY+VPF++ +LV
Sbjct: 145 QKLEFLHRNNLQYDAISAEEKSSLQRELIESSYGLS-GITVEQQDFYRVPFQDALDLVRA 203
Query: 188 RRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEALS 247
R+VY+ G+AY+ +V++V+ FR+ LSKAL LT R + +RL P++ LS
Sbjct: 204 RKVYLKAGYAYIPHQDIVTIVLNDFRTRLSKALALTARSLPAV---HSDERLQPLLTHLS 260
Query: 248 MSYLGPDYSQTKEFGEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLK 307
+Y+G DYS K G IS++ +D L+ SFPLCMR L LRE+HHL+HGGRMQ GLFLK
Sbjct: 261 HAYVGQDYSVQKNVGRISLEQVDSLSGKSFPLCMRQLHQSLRENHHLRHGGRMQYGLFLK 320
Query: 308 GVGLRMEDALAFWKAEFSQ-KVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQKII-SS 365
G+GL +E AL FW++EF + KV A++FDK YAY IRH +GKEGKR DYTPYSC K+I S+
Sbjct: 321 GIGLSLEQALQFWRSEFIRGKVDADKFDKAYAYGIRHMFGKEGKRADYTPYSCMKVILSN 380
Query: 366 TPGVGDHHGCPYRHFSEENLRAALGRMGVGSRAMEDVVDKVRNRHYQLACTLTFEAVHS- 424
PG GDHHGCP+RH E L+ L V + +++ V+ HYQLAC FE H+
Sbjct: 381 APGQGDHHGCPFRHSDPELLKQKLQVYKVPPSGIGQILELVKGMHYQLACQKYFELTHNV 440
Query: 425 SSCDAGINHPNQYFSDSHKIL 445
++HPNQYF +S KIL
Sbjct: 441 EDVSFSLSHPNQYFIESQKIL 461
>gi|426250096|ref|XP_004018774.1| PREDICTED: DNA primase large subunit-like [Ovis aries]
Length = 506
Score = 349 bits (895), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 187/435 (42%), Positives = 267/435 (61%), Gaps = 13/435 (2%)
Query: 20 TLPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISD-ALARGKRPEEMEN-LVRDLWKANMR 77
+L Y P V L +FE A+DR+++LK + + ++ K E+ ++ L +L K
Sbjct: 25 SLQFYLQPPSGNVSLTEFETLAIDRVKLLKTVENLGVSYMKGTEQYQSKLEAELRKLKFS 84
Query: 78 HPEASEDV----NKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKRALM 133
+ E+ ED KD ISHF+LRL YC++EDLR+WF+ E L R+RF + + ++ +
Sbjct: 85 YRESLEDEYEPRRKDHISHFILRLAYCQSEDLRRWFIQQEMDLLRFRFSILPKDKIQSFL 144
Query: 134 EEFDLPCKAISRTEFENAKEKLEQVARSFDQPLPTADAIFYKVPFEEVPELVAGRRVYIH 193
++ L +AIS E ++ + + S P+ YK+PF E +L GR+VY+
Sbjct: 145 KDSHLQFEAISDEEKALREQDIVASSPSLGGA-PSGLESVYKIPFAEALDLFRGRKVYLE 203
Query: 194 KGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEALSMSYLGP 253
G AYV +V++V+ +FR+ LSKAL LT R + Q +RL P++ LS SY G
Sbjct: 204 NGFAYVPHKDIVAIVLNEFRTKLSKALALTARSLPAV---QSDERLQPLLNHLSHSYTGQ 260
Query: 254 DYSQTKEFGEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRM 313
DYS G+IS+ +D L+ FP CMR L LRE+HHL+HGGRMQ GLFLKG+GL +
Sbjct: 261 DYSTQGNAGKISLDQIDSLSTKCFPPCMRQLHKALRENHHLRHGGRMQYGLFLKGIGLTL 320
Query: 314 EDALAFWKAEFSQ-KVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQKII-SSTPGVGD 371
E AL FWK EF + K+ ++FDK Y+Y+IRH+YGKEGKRTDYTPYSC KII ++TPG GD
Sbjct: 321 EQALQFWKQEFIRGKMDPDKFDKGYSYNIRHSYGKEGKRTDYTPYSCMKIILTNTPGQGD 380
Query: 372 HHGCPYRHFSEENLRAALGRMGVGSRAMEDVVDKVRNRHYQLACTLTFEAVHS-SSCDAG 430
+HGCP+RH E LR L + + ++D V+ HYQ+AC FE H+ C
Sbjct: 381 YHGCPFRHSDPELLRQKLQAYKIPPAGISQILDLVKGTHYQVACQKFFEMTHNVDDCGFS 440
Query: 431 INHPNQYFSDSHKIL 445
++HPNQ+F +S +IL
Sbjct: 441 LSHPNQFFFESQRIL 455
>gi|320165794|gb|EFW42693.1| primase [Capsaspora owczarzaki ATCC 30864]
Length = 538
Score = 348 bits (893), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 195/461 (42%), Positives = 274/461 (59%), Gaps = 21/461 (4%)
Query: 1 MEIVRSQRSRTNTPNDSVSTLPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKR 60
M+ +R ++ + L +Y P EV LE+FE FA DRL+VLK I LAR K
Sbjct: 1 MQHIRKGGNKVTVFREYPHKLSIYPLPPIQEVSLEEFETFAADRLKVLKAIE--LARIKF 58
Query: 61 PE---EMENLVRDLWKANMRHPE--ASEDV-----NKDIISHFVLRLVYCRTEDLRKWFL 110
P+ E LV D + M E ED+ KD ISH++LRLVYCR+EDLR+WFL
Sbjct: 59 PKRGVEYNGLVNDAIRKYMPLSENDQGEDICVAERRKDHISHYILRLVYCRSEDLRRWFL 118
Query: 111 SMETALYRYRFLLGSSEAKRALMEEFDLPCKAISRTEFENAKEKLEQVARSFDQPLPTAD 170
E L+R++F+ + ++ DL I E L+ A P
Sbjct: 119 MHELELFRFKFVAETQAQIVTFLKANDLSYVPIPNEEKAQLLPLLQASAGPTVSPQDILS 178
Query: 171 AIFYKVPFEEVPELVAGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTST 230
++K+PF ELV RRVY+ G YV ++VS++ +RS LS AL T+R +
Sbjct: 179 EDYFKLPFLAALELVRSRRVYLQGGAVYVPRRELVSILSGVYRSRLSSALAQTSRALPNL 238
Query: 231 IREQERDRLTPIVEALSMSYLGPDY-SQTKEF-GEISIKDLDQLARSSFPLCMRHLFDKL 288
+E +RL P++ AL+ YLG DY SQ + G I+ + +D L+ +SF CMR+L L
Sbjct: 239 ---EEDERLVPLLNALAKQYLGSDYLSQRGQVTGNITSEQVDGLSTTSFSPCMRNLHQAL 295
Query: 289 REDHHLKHGGRMQLGLFLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKE 348
R +HHL+HGGRMQ GLFLK +GL +++A+ FW+ EF++ +GA++FDK YAY+IRHNYGKE
Sbjct: 296 RGNHHLRHGGRMQYGLFLKSIGLHLDEAMRFWRTEFTRIMGADKFDKSYAYNIRHNYGKE 355
Query: 349 GKRTDYTPYSCQKIISS-TPGVGDHHGCPYRHFSEENLRAALGRMGVGSRAMEDVVDKVR 407
GKRTDY+ YSC KII+S PGVGDHHGCP+RHF E+LR + GV S +++++ V+
Sbjct: 356 GKRTDYSSYSCAKIITSNNPGVGDHHGCPFRHFDAEHLRQKMYEYGVASGGIKEIIGLVQ 415
Query: 408 NRHYQLACTLTFEAVHSSSCDAG---INHPNQYFSDSHKIL 445
+Q+ACT FE H A ++HP Q++ +S K+L
Sbjct: 416 GNQFQVACTRYFELTHKLPQGASPMIVSHPRQFYDESRKLL 456
>gi|126310185|ref|XP_001364910.1| PREDICTED: DNA primase large subunit [Monodelphis domestica]
Length = 508
Score = 348 bits (892), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 193/462 (41%), Positives = 274/462 (59%), Gaps = 24/462 (5%)
Query: 1 MEIVRSQRSRTNTPNDSVS-----TLPLYRYAPQLEVRLEDFEVFAMDRLRVLK-----G 50
M+ ++R + + D S +L Y P + L +FE A++RL++LK G
Sbjct: 1 MQFSGTKRKKLSLAGDQRSAHYPHSLQFYLQPPSENISLLEFENLAIERLKLLKIVENLG 60
Query: 51 ISDALARGKRPEEMENLVRDLWKANMRHPEASEDV----NKDIISHFVLRLVYCRTEDLR 106
+S + ++E +R L K + R E+SED +D ISHF+LRL YC++EDLR
Sbjct: 61 VSYVKGSDQYQSKLETEIRKL-KFSFR--ESSEDEFDARRRDHISHFILRLAYCQSEDLR 117
Query: 107 KWFLSMETALYRYRFLLGSSEAKRALMEEFDLPCKAISRTEFENAKEKLEQVARSFDQPL 166
+WF+ E L+R+RF + S+ + +++ L + +S E + + + +
Sbjct: 118 RWFIQQEMDLFRFRFSILPSDKVQGFLKDSHLQFETLSDEEKQLRSQDIIDSSAPLSGNK 177
Query: 167 PTADAIFYKVPFEEVPELVAGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRK 226
DA+ YKVPF + +L GR+VY+ G A+V +VS+++ FR+ LSKAL LT R
Sbjct: 178 YELDAV-YKVPFADALDLFRGRKVYLEHGFAFVPHQDIVSIILNDFRAKLSKALALTARS 236
Query: 227 WTSTIREQERDRLTPIVEALSMSYLGPDYSQTKEFGEISIKDLDQLARSSFPLCMRHLFD 286
S Q +RL P++ LS SY+G DY+ G+IS+ LD LA SFPLCMR L
Sbjct: 237 LPSV---QSDERLQPLLNHLSHSYVGQDYNAQGNMGKISLDQLDSLAVKSFPLCMRQLHK 293
Query: 287 KLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWKAEFSQ-KVGAERFDKEYAYSIRHNY 345
LRE HHL+HGGRMQ GLFLKG+GL +E AL FWK EF + KV ++FDK YAY+IRH+Y
Sbjct: 294 ALREHHHLRHGGRMQYGLFLKGIGLTLEQALQFWKLEFIKGKVDTDKFDKGYAYNIRHSY 353
Query: 346 GKEGKRTDYTPYSCQKII-SSTPGVGDHHGCPYRHFSEENLRAALGRMGVGSRAMEDVVD 404
GKEGKRTDYTP+SC KII ++ P GD+HGCP+RH E L+ L + + ++D
Sbjct: 354 GKEGKRTDYTPFSCMKIILTNPPSQGDYHGCPFRHSDPELLKQRLQSSKISQTGINQILD 413
Query: 405 KVRNRHYQLACTLTFEAVHSSSCDA-GINHPNQYFSDSHKIL 445
V+ HYQLAC F+ H+ +NHPNQYF +S K+L
Sbjct: 414 YVKGTHYQLACQKFFDLTHNVEDGLFSLNHPNQYFLESQKLL 455
>gi|410901483|ref|XP_003964225.1| PREDICTED: DNA primase large subunit-like [Takifugu rubripes]
Length = 516
Score = 347 bits (890), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 189/442 (42%), Positives = 263/442 (59%), Gaps = 24/442 (5%)
Query: 23 LYRYAPQLEVRLEDFEVFAMDRLRVLKGISD-ALARGKRPEEMENLVRDLWKANMRHPEA 81
Y P + L +FE FA++RL++LK I ++ K E+ + + K N+ P
Sbjct: 25 FYVQPPLENISLNEFETFAVERLKLLKTIETLGVSYVKLSEQYKKKLESESK-NLNFPYR 83
Query: 82 SEDVN---------------KDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSS 126
SE + KD ISHF+LRL YC+TE+LR+WF+ E L+RYRF S
Sbjct: 84 SETDDRKIPPGGLSECEKRRKDHISHFILRLAYCQTEELRRWFIQQEVDLFRYRFSELHS 143
Query: 127 EAKRALMEEFDLPCKAISRTEFENAKEKLEQVARSFDQPLPTADAIFYKVPFEEVPELVA 186
+ K + +L AIS E + +L + FYKVPF++ +LV
Sbjct: 144 KQKLEFLHRNNLQYDAISAEEKSELQRELIDSTYGVS-GITVEQQDFYKVPFQDALDLVR 202
Query: 187 GRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEAL 246
R+VY+ G+AY+ +V++V+ FR+ LSKAL LT R + +RL P++ L
Sbjct: 203 TRKVYLRAGYAYIPHQDIVTIVLNDFRTRLSKALALTARSLPAV---HSDERLQPLLSHL 259
Query: 247 SMSYLGPDYSQTKEFGEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFL 306
S +Y+G DYS K G+ S++ +D L+ SFPLCMR L LRE+HHL+HGGRMQ GLFL
Sbjct: 260 SHAYVGQDYSVQKNVGKFSLEQVDSLSGKSFPLCMRQLHQSLRENHHLRHGGRMQYGLFL 319
Query: 307 KGVGLRMEDALAFWKAEFSQ-KVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQKII-S 364
KG+GL +E AL FW++EF + KV A++FDK YAYS+RH +G+EGKRTDYTPYSC K+I S
Sbjct: 320 KGIGLSLEQALQFWRSEFVKGKVDADKFDKAYAYSVRHMFGREGKRTDYTPYSCMKVILS 379
Query: 365 STPGVGDHHGCPYRHFSEENLRAALGRMGVGSRAMEDVVDKVRNRHYQLACTLTFEAVHS 424
+ PG GDHHGCP+RH E L+ L V + +++ V+ HYQLAC FE H+
Sbjct: 380 NAPGQGDHHGCPFRHSDPELLKQKLQVYKVPPSGISQILELVKGMHYQLACQKYFELTHN 439
Query: 425 -SSCDAGINHPNQYFSDSHKIL 445
+ ++HPNQYF +S KIL
Sbjct: 440 VDDANFSLSHPNQYFIESQKIL 461
>gi|344264764|ref|XP_003404460.1| PREDICTED: DNA primase large subunit [Loxodonta africana]
Length = 505
Score = 347 bits (889), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 186/437 (42%), Positives = 274/437 (62%), Gaps = 19/437 (4%)
Query: 20 TLPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISD-ALARGKRPEEMEN-LVRDLWKANMR 77
+L Y P + L +FE A+DR+++LK + + L+ K EE ++ L +L K
Sbjct: 25 SLQFYLQPPSENISLIEFENLAIDRVKLLKSVENLGLSHLKGSEEYQSKLEAELRKLKFS 84
Query: 78 HPEASEDV----NKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKRALM 133
+ E+ ED +D ISHF+LRL YC++EDLR+WF+ E L R+RF + + ++ +
Sbjct: 85 YRESLEDEYEPRRRDHISHFILRLAYCQSEDLRRWFIQQEMDLLRFRFSILPKDKIQSFL 144
Query: 134 EEFDLPCKAISRTEFENAKEKLEQVARSFDQPLPTADAI--FYKVPFEEVPELVAGRRVY 191
++ L +AIS E +N +E+ E +A S P+ + + YK+PF + +L GR+VY
Sbjct: 145 KDSHLQFEAISDEE-KNLREQ-EIIASS---PILSGTQLETVYKIPFADALDLFRGRKVY 199
Query: 192 IHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEALSMSYL 251
+ G AYV + +V++++ +FR+ LSKAL LT R + Q +RL P++ LS SY
Sbjct: 200 LEAGFAYVPLKDIVAIILNEFRAKLSKALALTARSLPAV---QSDERLQPLLNHLSHSYT 256
Query: 252 GPDYSQTKEFGEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGL 311
G DYS G+IS+ +D L+ SFP CMR L LRE+HHL+HGGRMQ GLFLKGVGL
Sbjct: 257 GQDYSTQGNVGKISLDQIDSLSTKSFPPCMRQLHKALRENHHLRHGGRMQYGLFLKGVGL 316
Query: 312 RMEDALAFWKAEFSQ-KVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQKII-SSTPGV 369
+E AL FWK EF++ K+ ++FDK Y+Y+IRH++GKEGKR DYTPYSC KII ++ P
Sbjct: 317 TLEQALQFWKQEFTKGKMDPDKFDKGYSYNIRHSFGKEGKRIDYTPYSCLKIILTNPPSQ 376
Query: 370 GDHHGCPYRHFSEENLRAALGRMGVGSRAMEDVVDKVRNRHYQLACTLTFEAVHS-SSCD 428
GD+HGCP+RH E L+ L + + ++D V+ HYQ+AC FE +H+ C
Sbjct: 377 GDYHGCPFRHSDPELLKQRLQSYKISPGGINQILDLVKGTHYQVACQKYFEMIHNVDDCG 436
Query: 429 AGINHPNQYFSDSHKIL 445
++HPNQ+F +S +IL
Sbjct: 437 FSLSHPNQFFIESQRIL 453
>gi|395833384|ref|XP_003789717.1| PREDICTED: DNA primase large subunit [Otolemur garnettii]
Length = 511
Score = 346 bits (887), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 194/466 (41%), Positives = 281/466 (60%), Gaps = 32/466 (6%)
Query: 1 MEIVRSQRSRTNTPNDSVST-----LPLYRYAPQLEVRLEDFEVFAMDRLRVLK-----G 50
M+ +R + D +T L Y P + L +FE FA+DRL++LK G
Sbjct: 1 MQFSGGKRRKLRLAGDQKNTSYPHCLQFYLEPPSENISLTEFENFAIDRLKLLKSVEHLG 60
Query: 51 ISDALARGKRPEEMENLVRDL---WKANMRHPEASEDVNKDIISHFVLRLVYCRTEDLRK 107
+S + ++E +R L ++ N+ + E KD ISHF++RL YC++EDLR+
Sbjct: 61 VSYVKGTEQYQSKLEAELRKLKFSYRENLE--DEYEPRRKDHISHFIVRLAYCQSEDLRR 118
Query: 108 WFLSMETALYRYRFLLGSSEAKRALMEEFDLPCKAISRTEFENAKEKLEQVARSFDQPLP 167
WF+ E L R+RF + + + +++ L +A+S E ++ +EK E +A S P
Sbjct: 119 WFIQQEMDLLRFRFSILPKDKIQDFLKDSHLEFEALSDDE-KSLREK-EIIASS---PSL 173
Query: 168 TADAIF-----YKVPFEEVPELVAGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALIL 222
T A+F YKVPF + +L GR+VY+ G AYV + +V++++ +FR+ LSKAL L
Sbjct: 174 TG-AVFELESVYKVPFPDALDLFRGRKVYLEDGFAYVPLKDIVAIILNEFRAKLSKALAL 232
Query: 223 TNRKWTSTIREQERDRLTPIVEALSMSYLGPDYSQTKEFGEISIKDLDQLARSSFPLCMR 282
T R + Q +RL P++ LS SY G DYS + G+IS+ +D L+ SFP CMR
Sbjct: 233 TARSLPTV---QSDERLQPLLSHLSHSYTGQDYSIQRSVGKISLDQIDSLSTKSFPPCMR 289
Query: 283 HLFDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWKAEFSQ-KVGAERFDKEYAYSI 341
L LRE+HHL+HGGRMQ GLFLKG+GL +E AL FWK EF + K+ ++FDK Y+Y+I
Sbjct: 290 QLHKALRENHHLRHGGRMQYGLFLKGIGLTLEQALQFWKQEFIRGKMDPDKFDKGYSYNI 349
Query: 342 RHNYGKEGKRTDYTPYSCQKII-SSTPGVGDHHGCPYRHFSEENLRAALGRMGVGSRAME 400
RH++GKEGKRTDYTP+SC KII ++ PG GD+HGCP+RH E L+ L V +
Sbjct: 350 RHSFGKEGKRTDYTPFSCMKIILTNPPGQGDYHGCPFRHSDPELLKQKLQSYKVSPERIS 409
Query: 401 DVVDKVRNRHYQLACTLTFEAVHS-SSCDAGINHPNQYFSDSHKIL 445
++D V+ HYQ+AC FE H+ C +NHPNQ+F +S +IL
Sbjct: 410 QILDLVKGSHYQVACQKYFEMTHNVDDCGFSLNHPNQFFCESQRIL 455
>gi|260813906|ref|XP_002601657.1| hypothetical protein BRAFLDRAFT_124303 [Branchiostoma floridae]
gi|229286956|gb|EEN57669.1| hypothetical protein BRAFLDRAFT_124303 [Branchiostoma floridae]
Length = 474
Score = 345 bits (886), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 170/360 (47%), Positives = 242/360 (67%), Gaps = 9/360 (2%)
Query: 90 ISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKRALMEEFDLPCKAISRTEFE 149
ISHF+LRL YC++EDLR+WFL+ E L+R+RF S +A ++ +L + I E +
Sbjct: 66 ISHFILRLAYCKSEDLRRWFLTQEMDLFRFRFQQESKDAIGHFLQLNNLDYQPIPEEEKK 125
Query: 150 NAKEKLEQVARSFD-QPLPTADAIFYKVPFEEVPELVAGRRVYIHKGHAYVAMHQVVSLV 208
+++L+ + T D FYKVPF+E +LV R+VY+ KG+ YV ++VS++
Sbjct: 126 ALRDELKSSSYEMKGDKFETTD--FYKVPFQEALDLVRARKVYLKKGYVYVPQSELVSII 183
Query: 209 VTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEALSMSYLGPDYSQTKEF-GEISIK 267
++ FR NLSKAL +T R QE +RL + L YLG DYS K G+++ +
Sbjct: 184 LSAFRENLSKALAVTARALPYL---QEDERLLKRLANLHTQYLGQDYSNRKSTAGKVAPE 240
Query: 268 DLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWKAEFSQK 327
D++ L++ SFPLCMR+L + LR +HHL+HGGRMQ GLFLKG+GL++EDAL FW++EF++
Sbjct: 241 DIEPLSKKSFPLCMRNLQETLRREHHLRHGGRMQYGLFLKGIGLQLEDALRFWRSEFTKM 300
Query: 328 VGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQKII-SSTPGVGDHHGCPYRHFSEENLR 386
+ ++FDK Y+Y+IRHNYGKEGKRTDYTPYSC K+I ++ P VGDHHGCP+RH E L
Sbjct: 301 MDGDKFDKSYSYNIRHNYGKEGKRTDYTPYSCMKVIMTNAPAVGDHHGCPFRHTDPELLN 360
Query: 387 AALGRMGVGSRAMEDVVDKVRNRHYQLACTLTFEAVHS-SSCDAGINHPNQYFSDSHKIL 445
L V + ++++++ V+ HYQLACT FE H+ G+NHPNQYF +S K+L
Sbjct: 361 QRLQGYRVNTTGVQEIIELVKGGHYQLACTKYFEITHNVDDAGFGLNHPNQYFEESQKVL 420
>gi|332210122|ref|XP_003254154.1| PREDICTED: DNA primase large subunit [Nomascus leucogenys]
Length = 509
Score = 345 bits (886), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 183/434 (42%), Positives = 269/434 (61%), Gaps = 13/434 (2%)
Query: 21 LPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISD-ALARGKRPEEMEN-LVRDLWKANMRH 78
L Y P + L +FE A+DR+++LK + + ++ K E+ ++ L +L K +
Sbjct: 26 LQFYLQPPSENISLIEFENLAIDRVKLLKSVENLGVSYVKGTEQYQSKLESELRKLKFSY 85
Query: 79 PEASEDV----NKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKRALME 134
E ED +D ISHF+LRL YC++E+LR+WF+ E L R+RF + + + ++
Sbjct: 86 RENLEDEYEPRRRDHISHFILRLAYCQSEELRRWFIQQEMDLLRFRFSILPKDKIQDFLK 145
Query: 135 EFDLPCKAISRTEFENAKEKLEQVARSFDQPLPTADAIFYKVPFEEVPELVAGRRVYIHK 194
+ L +AIS E ++++ + S P ++I YKVPF + +L GR+VY+
Sbjct: 146 DSQLQFEAISDEEKTLREQEIFASSPSLSGPKSGFESI-YKVPFADALDLFRGRKVYLED 204
Query: 195 GHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEALSMSYLGPD 254
G AYV + +V++++ +FR+ LSKAL LT R + Q +RL P++ LS SY G D
Sbjct: 205 GFAYVPLKDIVAIILNEFRAKLSKALALTARSLPAV---QSDERLQPLLNHLSHSYTGQD 261
Query: 255 YSQTKEFGEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRME 314
YS G+IS+ +D L+ SFP CMR L LRE+HHL+HGGRMQ GLFLKG+GL +E
Sbjct: 262 YSTQGNVGKISLDQIDSLSTKSFPPCMRQLHKALRENHHLRHGGRMQYGLFLKGIGLTLE 321
Query: 315 DALAFWKAEFSQ-KVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQKII-SSTPGVGDH 372
AL FWK EF + K+ ++FDK Y+Y+IRH++GKEGKRTDYTP+SC KII S+ PG GD+
Sbjct: 322 QALQFWKQEFIKGKMDPDKFDKGYSYNIRHSFGKEGKRTDYTPFSCLKIILSNPPGQGDY 381
Query: 373 HGCPYRHFSEENLRAALGRMGVGSRAMEDVVDKVRNRHYQLACTLTFEAVHS-SSCDAGI 431
HGCP+RH E L+ L + + ++D V+ HYQ+AC FE +H+ C +
Sbjct: 382 HGCPFRHSDPELLKQKLQSYKISPGGISQILDLVKGIHYQVACQKYFEMIHNVDDCGFSL 441
Query: 432 NHPNQYFSDSHKIL 445
NHPNQ+F +S +IL
Sbjct: 442 NHPNQFFFESQRIL 455
>gi|57032570|gb|AAH88966.1| LOC496363 protein, partial [Xenopus laevis]
Length = 517
Score = 345 bits (885), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 190/415 (45%), Positives = 262/415 (63%), Gaps = 18/415 (4%)
Query: 19 STLPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISD-ALARGKRPEE----MENLVRDL-W 72
S+L Y++ P + L +FE FA++RL++LK + + ++ K EE +E +R L +
Sbjct: 101 SSLQFYQHPPTENISLTEFETFAIERLKLLKAVENLGVSYVKNSEEYSKKLELELRKLKF 160
Query: 73 KANMRHPEASEDV----NKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEA 128
H E S+DV KD ISHF+LRL YC++EDLR+WF+ E L+++RF L + E+
Sbjct: 161 PYRPLHEEISDDVYDLRRKDHISHFILRLAYCQSEDLRRWFIQQEIDLFKFRFGLLTKES 220
Query: 129 KRALMEEFDLPCKAISRTEFENAKEKLEQVARSFDQPLPTA-DAIFYKVPFEEVPELVAG 187
+ ++ DL AIS E KE L + SF L D FYKVPF+ +LV
Sbjct: 221 VQEFLKLNDLQYVAISEDEKNMHKEDL--MNSSFGLSLTKMEDTEFYKVPFQAALDLVRP 278
Query: 188 RRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEALS 247
R+V++ +G A++ +VS+V+ FR+ LSKAL L+ R Q +RL P++ LS
Sbjct: 279 RKVFLWRGFAFIPHKDIVSIVLNDFRAKLSKALALSARSLPVV---QSDERLQPLLNHLS 335
Query: 248 MSYLGPDYSQTKEFGEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLK 307
SY+G D+S G+IS++ +D A SFPLCMR L LRE+HHL+HGGRMQ GLFLK
Sbjct: 336 HSYIGQDFSSQSNTGKISLEQIDGFAAKSFPLCMRQLHKSLRENHHLRHGGRMQYGLFLK 395
Query: 308 GVGLRMEDALAFWKAEFSQ-KVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQKII-SS 365
G+GL +E AL FW+ EF++ KV +E+FDK YAYSIRHNYGKEGKRTDYTPYSC K+I S+
Sbjct: 396 GIGLTLEQALQFWRLEFTKGKVDSEKFDKVYAYSIRHNYGKEGKRTDYTPYSCMKVILSN 455
Query: 366 TPGVGDHHGCPYRHFSEENLRAALGRMGVGSRAMEDVVDKVRNRHYQLACTLTFE 420
P GD+HGCP+RH E L+ L V S + +++ V+ HYQLAC FE
Sbjct: 456 PPSQGDYHGCPFRHSDPELLKQKLQSFKVPSSGINQILELVKGMHYQLACQKYFE 510
>gi|6679461|ref|NP_032948.1| DNA primase large subunit [Mus musculus]
gi|464462|sp|P33610.1|PRI2_MOUSE RecName: Full=DNA primase large subunit; AltName: Full=DNA primase
58 kDa subunit; Short=p58
gi|303663|dbj|BAA02745.1| primase large subunit [Mus musculus]
gi|18043001|gb|AAH19500.1| DNA primase, p58 subunit [Mus musculus]
gi|26345060|dbj|BAC36179.1| unnamed protein product [Mus musculus]
gi|26346695|dbj|BAC36996.1| unnamed protein product [Mus musculus]
gi|74150513|dbj|BAE32287.1| unnamed protein product [Mus musculus]
gi|148682487|gb|EDL14434.1| DNA primase, p58 subunit [Mus musculus]
Length = 505
Score = 345 bits (885), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 181/435 (41%), Positives = 270/435 (62%), Gaps = 13/435 (2%)
Query: 20 TLPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISD-ALARGKRPEEMEN-LVRDLWKANMR 77
+L Y P + L +FE A DR+++LK I + ++ K E+ ++ L ++ K
Sbjct: 25 SLQFYLQPPTENISLTEFENLAFDRVKLLKAIENLGVSYVKGTEQYQSKLEAEIRKLKFS 84
Query: 78 HPEASEDV----NKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKRALM 133
+ E ED +D ISHF+LRL YC++EDLR+WF+ E L R+RF + + ++ +
Sbjct: 85 YRENLEDEYEPRRRDHISHFILRLAYCQSEDLRRWFIQQEMDLLRFRFSILPKDKVQSFL 144
Query: 134 EEFDLPCKAISRTEFENAKEKLEQVARSFDQPLPTADAIFYKVPFEEVPELVAGRRVYIH 193
++ L +AIS E ++ + + S ++++ YKVPF + +L GR+VY+
Sbjct: 145 KDSHLHFEAISDEEKTLREQDIMASSPSLSGIKLESESV-YKVPFADALDLFRGRKVYLE 203
Query: 194 KGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEALSMSYLGP 253
G AYV + +V++++ +FR+ LSKAL LT R + Q +RL P++ LS SY G
Sbjct: 204 DGFAYVPLKDIVAIILNEFRATLSKALALTARSLPAV---QSDERLQPLLNHLSHSYTGQ 260
Query: 254 DYSQTKEFGEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRM 313
DYS K G+IS+ +D L+ SFP CMR L LRE+HHL+HGGRMQ GLFLKG+GL +
Sbjct: 261 DYSTQKNTGKISLDQIDSLSTKSFPPCMRQLHKALRENHHLRHGGRMQYGLFLKGIGLTL 320
Query: 314 EDALAFWKAEFSQ-KVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQKII-SSTPGVGD 371
E AL FWK EF + K+ ++FDK Y+Y+IRH++GKEGKRTDYTP+SC KII ++ PG GD
Sbjct: 321 EQALQFWKQEFIRGKMDPDKFDKGYSYNIRHSFGKEGKRTDYTPFSCMKIILTNPPGQGD 380
Query: 372 HHGCPYRHFSEENLRAALGRMGVGSRAMEDVVDKVRNRHYQLACTLTFEAVHS-SSCDAG 430
+HGCP+RH E L+ + + + + ++D V+ HYQ+AC FE H+ C
Sbjct: 381 YHGCPFRHSDAELLKQKMQSYKIPASGISQILDLVKGNHYQVACQKYFEMTHNVDDCGFS 440
Query: 431 INHPNQYFSDSHKIL 445
+NHPNQ+F +S +IL
Sbjct: 441 LNHPNQFFFESQRIL 455
>gi|224048589|ref|XP_002194322.1| PREDICTED: DNA primase large subunit-like [Taeniopygia guttata]
Length = 508
Score = 345 bits (884), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 192/436 (44%), Positives = 258/436 (59%), Gaps = 15/436 (3%)
Query: 20 TLPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEEM--ENLVRDLWKANMR 77
+L Y P + L +FE FA+DRLR+LK I + R ++ L +L K
Sbjct: 25 SLQFYLEPPTESISLVEFESFAVDRLRLLKVIENLGVSHVRGSDVYKTKLEAELRKLKFP 84
Query: 78 HPEASED----VNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKRALM 133
+ ED KD ISHF+LRL YC++EDLR+WFL E L+RYRF + + +
Sbjct: 85 YRALVEDDYEARRKDHISHFILRLAYCQSEDLRRWFLQQEMDLFRYRFNELTENLMQKFL 144
Query: 134 EEFDLPCKAISRTEFENAKEKLEQVARSFDQPLPTADAIFYKVPFEEVPELVAGRRVYIH 193
E +L +AI +L F+ + +FYKV + +L R+V+I
Sbjct: 145 EHVNLSFEAIGEDLKNELANELSVSTPGFNMS-KVKEQMFYKVGLADAVDLFRARKVFIK 203
Query: 194 KGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEALSMSYLGP 253
G AYV ++ +V+ +R+ LSKAL LT R S Q +RL P++ LS SY+GP
Sbjct: 204 DGFAYVPFKEIDVIVLNHYRTKLSKALALTARSLPSI---QSDERLQPLLNHLSHSYVGP 260
Query: 254 DYSQTKEFGEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRM 313
DYS G+IS++ +D L+ SFPLCMR L LR++HHL+HGGRMQ GLFLKG+GL +
Sbjct: 261 DYSVQNNTGKISLEQIDALSVKSFPLCMRQLHRALRDNHHLRHGGRMQYGLFLKGIGLTL 320
Query: 314 EDALAFWKAEFSQ-KVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQKII-SSTPGVGD 371
E AL FWK EF + KV A++FDK YAYSIRH+YGKEG+RTDYTPYSC KII S+ P GD
Sbjct: 321 EQALEFWKKEFIRGKVDADKFDKGYAYSIRHSYGKEGRRTDYTPYSCMKIIMSNPPSQGD 380
Query: 372 HHGCPYRHFSEENLRAALGRMGVGSRAMEDVVDKVRNRHYQLACTLTFEAVHSSSCDAG- 430
+HGCP+RH E L+ L + + V++ V+ H+QLAC FE H D G
Sbjct: 381 YHGCPFRHSDPELLKQKLQSYKISPSGIAQVLELVKGMHFQLACQKYFELTHDVD-DIGF 439
Query: 431 -INHPNQYFSDSHKIL 445
+NHPNQYF +S K+L
Sbjct: 440 SLNHPNQYFIESQKLL 455
>gi|321478938|gb|EFX89894.1| DNA primase-like protein [Daphnia pulex]
Length = 522
Score = 345 bits (884), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 192/472 (40%), Positives = 281/472 (59%), Gaps = 47/472 (9%)
Query: 3 IVRSQRSRTNTPNDSVSTLPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDA-LARGKRP 61
I S + R+ P+ +L LY P + L++ E +A++RL+VL+ I L++ R
Sbjct: 14 IKNSMKLRSEYPH----SLQLYSVPPSETIGLQELEDWAVERLKVLRAIERVNLSKNAR- 68
Query: 62 EEMENLVRDLWKANMRHPEASEDVN-----------------------KDIISHFVLRLV 98
D WK +++ +++N KD +SHF++RL
Sbjct: 69 ------FSDDWKTALKNDLQKQNLNSWYQLSSSIKDDKMDEIISKTRQKDHVSHFLMRLA 122
Query: 99 YCRTEDLRKWFLSMETALYRYRFLLGSSEAKRALMEEFDLPCKAISRTEFENAKEKLEQV 158
YCRTE+ R+WF++ ET L+R+RF + SSE RA M+E + I E + KL
Sbjct: 123 YCRTEEYRRWFIAQETDLFRFRFSMESSEDIRAFMKENKMNFLPIPEEEKKKILTKLIHA 182
Query: 159 ARSFDQPLPTADAI-FYKVPFEEVPELVAGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLS 217
A+ F+ DA+ +YKVPF E +LV R+VY+ G AY+ +VS++ FRS+LS
Sbjct: 183 AQ-FNAN--KVDAVEYYKVPFTEALDLVRHRKVYLQAGFAYIPSEDLVSIITAMFRSHLS 239
Query: 218 KALILTNRKWTSTIREQERD-RLTPIVEALSMSYLGPDYS--QTKEFGE-ISIKDLDQLA 273
A+ LT R ++ E E D R+ ++ Y G D++ Q K G ++ + +D L+
Sbjct: 240 LAMALTMR----SLPELEDDHRIRRLLNDFDKRYTGQDFNSLQNKSSGAAVTPEMIDGLS 295
Query: 274 RSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWKAEFSQKVGAERF 333
+ SFPLCMRHL + LR HHLKHGGRMQ GLF+KG+GL +E +L FW+ EFS+ + ++F
Sbjct: 296 KQSFPLCMRHLHETLRSTHHLKHGGRMQYGLFVKGIGLSLEHSLKFWREEFSKNMDMDKF 355
Query: 334 DKEYAYSIRHNYGKEGKRTDYTPYSCQKIISSTPGVGDHHGCPYRHFSEENLRAALGRMG 393
+K+YAY+IRHNYGKEGKR +Y P SC KIIS++ G G++HGCP+RHF LR +
Sbjct: 356 EKQYAYNIRHNYGKEGKRINYAPQSCIKIISASVGPGENHGCPFRHFDAAVLRQKMTMNR 415
Query: 394 VGSRAMEDVVDKVRNRHYQLACTLTFEAVHSSSCDAGINHPNQYFSDSHKIL 445
V A++++VD V HYQ+AC FEA H++ D+GI+HPNQYF +S KIL
Sbjct: 416 VPQPAIQEIVDLVTRHHYQIACQRYFEATHNTEIDSGIHHPNQYFIESQKIL 467
>gi|167524843|ref|XP_001746757.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163775027|gb|EDQ88653.1| predicted protein [Monosiga brevicollis MX1]
Length = 515
Score = 345 bits (884), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 186/433 (42%), Positives = 255/433 (58%), Gaps = 11/433 (2%)
Query: 21 LPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALAR-GKRPEEMENLVRDLWKANMRHP 79
L Y P EV LE+FE A++RL+VLK + R R ++ +R+ K +
Sbjct: 38 LQFYTLPPVDEVSLEEFERLAVERLKVLKDVELVKIRFPTRDDKFSAQMREKTKVFLPLI 97
Query: 80 EASEDVN---KDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKRALMEEF 136
+A+ + +D +SHF+LRL YCRTE+LR+WFL+ E L+RYR S+ L+E
Sbjct: 98 DAANPLEIRRRDHVSHFILRLAYCRTEELRRWFLTQECELFRYRLENQSANDITHLLELQ 157
Query: 137 DLPCKAISRTEFENAKEKLEQVARSFDQPLPTADAIFYKVPFEEVPELVAGRRVYIHKGH 196
+L + TE + L A D + ++KVPFE+ +LV GRR YI G+
Sbjct: 158 NLKYTVVDETEKMSIDRFLRSAALGGDLGGNVKNTEYFKVPFEQALDLVRGRRHYISNGN 217
Query: 197 AYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEALSMSYLGPDY- 255
YV + ++V FR LS +L T R +E RL P++ +LS YLG +Y
Sbjct: 218 VYVPREDMTPIIVGAFRLQLSASLAATARALPDL---EEDSRLLPMLNSLSQRYLGNEYR 274
Query: 256 -SQTKEFGEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRME 314
G+++ D+ LA+ SFPLCMR +KL E HHL+HG RMQ GLFLKG+GL +E
Sbjct: 275 VDAAGRAGQVAPADIPSLAKQSFPLCMRTAQEKLAEAHHLRHGARMQYGLFLKGIGLSLE 334
Query: 315 DALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQKII-SSTPGVGDHH 373
DAL FW+ EFS+ + ++FDK+YAY+IRHNYGKEGKR DYTPYSC +II PG GD H
Sbjct: 335 DALLFWRTEFSRAMSIDKFDKQYAYNIRHNYGKEGKRADYTPYSCMRIIMGEQPGTGDAH 394
Query: 374 GCPYRHFSEENLRAALGRMGVGSRAMEDVVDKVRNRHYQLACTLTFEAVHSSSCDA-GIN 432
GCP+RH++ ENLR L GV + ++ ++ V HYQ+AC FE H+ + I
Sbjct: 395 GCPFRHYNAENLRVKLHSYGVPTNSISEISKLVSEHHYQIACGRYFEVTHNCEPNTVSIQ 454
Query: 433 HPNQYFSDSHKIL 445
HPNQYF DS +IL
Sbjct: 455 HPNQYFDDSRQIL 467
>gi|442472|dbj|BAA04203.1| DNA primase large subunit p58 [Mus musculus]
Length = 505
Score = 344 bits (882), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 181/435 (41%), Positives = 270/435 (62%), Gaps = 13/435 (2%)
Query: 20 TLPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISD-ALARGKRPEEMEN-LVRDLWKANMR 77
+L Y P + L +FE A DR+++LK I + ++ K E+ ++ L ++ K
Sbjct: 25 SLQFYLQPPTENISLTEFENLAFDRVKLLKAIENLGVSYVKGTEQYQSKLEAEIRKLKFS 84
Query: 78 HPEASEDV----NKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKRALM 133
+ E ED +D ISHF+LRL YC++EDLR+WF+ E L R+RF + + ++ +
Sbjct: 85 YRENLEDEYEPRRRDHISHFILRLGYCQSEDLRRWFIQQEMDLLRFRFSILPKDKVQSFL 144
Query: 134 EEFDLPCKAISRTEFENAKEKLEQVARSFDQPLPTADAIFYKVPFEEVPELVAGRRVYIH 193
++ L +AIS E ++ + + S ++++ YKVPF + +L GR+VY+
Sbjct: 145 KDSHLHFEAISDEEKTLREQDIMASSPSLSGIKLESESV-YKVPFADALDLFRGRKVYLE 203
Query: 194 KGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEALSMSYLGP 253
G AYV + +V++++ +FR+ LSKAL LT R + Q +RL P++ LS SY G
Sbjct: 204 DGFAYVPLKDIVAIILNEFRATLSKALALTARSLPAV---QSDERLQPLLNHLSHSYTGQ 260
Query: 254 DYSQTKEFGEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRM 313
DYS K G+IS+ +D L+ SFP CMR L LRE+HHL+HGGRMQ GLFLKG+GL +
Sbjct: 261 DYSTQKNTGKISLDQIDSLSTKSFPPCMRQLHKALRENHHLRHGGRMQYGLFLKGIGLTL 320
Query: 314 EDALAFWKAEFSQ-KVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQKII-SSTPGVGD 371
E AL FWK EF + K+ ++FDK Y+Y+IRH++GKEGKRTDYTP+SC KII ++ PG GD
Sbjct: 321 EQALQFWKQEFIRGKMDPDKFDKGYSYNIRHSFGKEGKRTDYTPFSCMKIILTNPPGQGD 380
Query: 372 HHGCPYRHFSEENLRAALGRMGVGSRAMEDVVDKVRNRHYQLACTLTFEAVHS-SSCDAG 430
+HGCP+RH E L+ + + + + ++D V+ HYQ+AC FE H+ C
Sbjct: 381 YHGCPFRHSDAELLKQKMQSYKIPASGISQILDLVKGNHYQVACQKYFEMTHNVDDCGFS 440
Query: 431 INHPNQYFSDSHKIL 445
+NHPNQ+F +S +IL
Sbjct: 441 LNHPNQFFFESQRIL 455
>gi|149732306|ref|XP_001503368.1| PREDICTED: DNA primase large subunit [Equus caballus]
Length = 507
Score = 343 bits (881), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 182/436 (41%), Positives = 269/436 (61%), Gaps = 15/436 (3%)
Query: 20 TLPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEEM--ENLVRDLWKANMR 77
+L Y P + L +FE A+DRL++LK + + + E+ L ++ +
Sbjct: 25 SLQFYLQPPSENISLIEFENLAIDRLKLLKSVENLGVSYVKGTELYQSKLEAEIRRLKFS 84
Query: 78 HPEASEDV----NKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKRALM 133
+ E+ ED KD ISHF+LRL YC++EDLR+WF+ E L R+RF + + ++ +
Sbjct: 85 YRESLEDEYEPRRKDHISHFILRLAYCQSEDLRRWFIQQEMDLLRFRFSILPKDKIQSFL 144
Query: 134 EEFDLPCKAISRTEFENAKEKLEQVARSFDQPLPTADAIF-YKVPFEEVPELVAGRRVYI 192
++ L +AIS E +N +E+ E +A S P + + YK+PF + +L GR+VY+
Sbjct: 145 QDSHLHFEAISEEE-KNLREQ-EIIASSTSLGGPKLELEYVYKIPFADALDLFRGRKVYL 202
Query: 193 HKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEALSMSYLG 252
G AYV + +V++++ +FR+ LSKAL LT R + Q +RL P++ LS SY+G
Sbjct: 203 ENGFAYVPLKDIVAIILNEFRAKLSKALALTARSLPAV---QSDERLQPLLNHLSHSYIG 259
Query: 253 PDYSQTKEFGEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLR 312
DYS G+IS+ +D L+ SFP CMR L LRE+HHL+HGGRMQ GLFLKG+GL
Sbjct: 260 QDYSIQGNAGKISLDQIDSLSTKSFPPCMRQLHKALRENHHLRHGGRMQYGLFLKGIGLT 319
Query: 313 MEDALAFWKAEFSQ-KVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQKII-SSTPGVG 370
+E AL FWK EF + K+ ++FDK Y+Y+IRH++GKEGKRTDYTP+SC KII ++ P G
Sbjct: 320 LEQALQFWKQEFIKGKMDPDKFDKGYSYNIRHSFGKEGKRTDYTPFSCLKIILTNPPSQG 379
Query: 371 DHHGCPYRHFSEENLRAALGRMGVGSRAMEDVVDKVRNRHYQLACTLTFEAVHS-SSCDA 429
D+HGCP+RH E L+ L + + ++D V+ HYQ+AC FE H+ C
Sbjct: 380 DYHGCPFRHSDPELLKQKLQSYKITPGGISQILDLVKGTHYQVACQKYFEMTHNVDDCGF 439
Query: 430 GINHPNQYFSDSHKIL 445
+NHPNQ+F +S ++L
Sbjct: 440 SLNHPNQFFVESQRVL 455
>gi|449664277|ref|XP_002158954.2| PREDICTED: DNA primase large subunit-like [Hydra magnipapillata]
Length = 525
Score = 343 bits (880), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 190/474 (40%), Positives = 286/474 (60%), Gaps = 37/474 (7%)
Query: 5 RSQRSRTNTPN-DSVSTLPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKR--- 60
RS R T N + + L Y P E+ LE+FE FA+DRL+VL+ + + R KR
Sbjct: 9 RSIRITAKTENFEKYNRLLFYTTPPNEEIALEEFERFAIDRLKVLREVENVNIRFKRGTA 68
Query: 61 --PEEMENLVRDLW-----------KANMRHPEASED----------VNKDIISHFVLRL 97
E+M +++D +R + E+ KD ISHF+LRL
Sbjct: 69 DYEEKMRKILKDFMPHYFDTFSGDSSLIVRQDKLEEERKQLEYSIAECRKDSISHFILRL 128
Query: 98 VYCRTEDLRKWFLSMETALYRYRFLLGSSEAKRALMEEFDLPCKAISRTEFENAKEKLEQ 157
+ R+EDLR+WFL+ E L+R+RF L S+E + +++ L I + KEKL
Sbjct: 129 AFSRSEDLRRWFLTQEMDLFRFRFQLESNENINSFLKQNKLLFDPIDKETKMKIKEKLRD 188
Query: 158 VARSFDQPLP-TADAIFYKVPFEEVPELVAGRRVYIHKGHAYVAMHQVVSLVVTQFRSNL 216
F+ L D FYKVPF +V +LV R+V+I KG AYV ++VS+++ +R+ L
Sbjct: 189 SM--FNVELHHVMDTEFYKVPFTDVLDLVRSRKVFICKGFAYVPQQELVSIIIGIYRTQL 246
Query: 217 SKALILTNRKWTSTIREQERDRLTPIVEALSMSYLGP--DYSQTKEFGEISIKDLDQLAR 274
S AL +T+RK +E RL PI++ LS +Y+G D +T + ++ + +D+ ++
Sbjct: 247 SLALAITSRKLPYL---EEDTRLLPILKNLSNTYVGESFDAKKTSDGEKLELASIDESSK 303
Query: 275 SSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWKAEFSQKVGAERFD 334
SFPLCMR+L + LR++HHLKH GR+QLGLF+K GL +++AL +W+ EF++ + E+F+
Sbjct: 304 ISFPLCMRNLHEGLRKEHHLKHNGRLQLGLFVKAAGLTLDEALQYWRTEFTKNMDVEKFE 363
Query: 335 KEYAYSIRHNYGKEGKRTDYTPYSCQKIISST-PGVGDHHGCPYRHFSEENLRAALGRMG 393
K+YAY+IRH+YGKEGKR +YTPYSC KII+S PG GD+HGCP+++ + L+ L
Sbjct: 364 KQYAYNIRHSYGKEGKRANYTPYSCLKIITSNPPGAGDYHGCPFKYSDADILQRRLQTYK 423
Query: 394 VGSRAMEDVVDKVRNRHYQLACTLTFEAVHSSS-CDAGINHPNQYFSDSHKILQ 446
+ + A+ +++D V+++HYQ+AC FE H S A INHPNQYF +S + L
Sbjct: 424 IPNDAVNEIIDLVKHQHYQIACAKYFEVTHKSGEGTATINHPNQYFVESKRFLN 477
>gi|354492992|ref|XP_003508628.1| PREDICTED: DNA primase large subunit-like [Cricetulus griseus]
gi|344251645|gb|EGW07749.1| DNA primase large subunit [Cricetulus griseus]
Length = 507
Score = 342 bits (878), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 181/435 (41%), Positives = 269/435 (61%), Gaps = 13/435 (2%)
Query: 20 TLPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISD-ALARGKRPEEMEN-LVRDLWKANMR 77
+L Y P + L +FE A+DRL++LK I + ++ K E+ +N L ++ K
Sbjct: 25 SLQFYLQPPSENISLIEFENLAVDRLKLLKTIENLGVSYVKGTEQYQNKLEAEIRKLKFS 84
Query: 78 HPEASEDV----NKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKRALM 133
+ E ED +D ISHF+LRL YC++EDLR+WF+ E L R+RF + + + +
Sbjct: 85 YRENLEDEYEPRRRDHISHFILRLAYCQSEDLRRWFIQQEMDLLRFRFTILPKDKVQNFL 144
Query: 134 EEFDLPCKAISRTEFENAKEKLEQVARSFDQPLPTADAIFYKVPFEEVPELVAGRRVYIH 193
++ L +AIS E ++ + + S ++++ YK+PF + +L GR+VY+
Sbjct: 145 KDSHLHFEAISDEEKSLREQDITASSPSLSGVKWESESV-YKIPFADALDLFRGRKVYLE 203
Query: 194 KGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEALSMSYLGP 253
G AYV + +V++++ +FR+ LSKAL LT R + Q +RL P++ LS SY G
Sbjct: 204 DGLAYVPLKDIVAIILNEFRATLSKALALTARSLPAV---QSDERLQPLLNHLSHSYTGQ 260
Query: 254 DYSQTKEFGEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRM 313
DYS K G+IS+ +D L+ SFP CMR L LRE+HHL+HGGRMQ GLFLKG+GL +
Sbjct: 261 DYSIQKNPGKISLDQIDSLSTKSFPPCMRQLHKALRENHHLRHGGRMQYGLFLKGIGLTL 320
Query: 314 EDALAFWKAEFSQ-KVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQKII-SSTPGVGD 371
E AL FWK EF + K+ ++FDK Y+Y+IRH++GKEGKRTDYTP+SC KII ++ P GD
Sbjct: 321 EQALQFWKQEFIRGKMDPDKFDKGYSYNIRHSFGKEGKRTDYTPFSCMKIILTNPPSQGD 380
Query: 372 HHGCPYRHFSEENLRAALGRMGVGSRAMEDVVDKVRNRHYQLACTLTFEAVHS-SSCDAG 430
+HGCP+RH E L+ + + + + ++D V+ HYQ+AC FE H+ C
Sbjct: 381 YHGCPFRHSDAELLKQKMQSYKIPASGINQILDLVKGTHYQVACQKYFEMTHNVDDCGFS 440
Query: 431 INHPNQYFSDSHKIL 445
+NHPNQ+F +S +IL
Sbjct: 441 LNHPNQFFVESQRIL 455
>gi|34395744|sp|O89044.1|PRI2_RAT RecName: Full=DNA primase large subunit; AltName: Full=DNA primase
58 kDa subunit; Short=p58
gi|3676246|emb|CAA09722.1| DNA polymerase alpha subunit III (primase) [Rattus norvegicus]
gi|149046426|gb|EDL99319.1| DNA primase, p58 subunit, isoform CRA_a [Rattus norvegicus]
gi|149046427|gb|EDL99320.1| DNA primase, p58 subunit, isoform CRA_a [Rattus norvegicus]
Length = 507
Score = 342 bits (877), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 180/435 (41%), Positives = 268/435 (61%), Gaps = 13/435 (2%)
Query: 20 TLPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISD-ALARGKRPEEMEN-LVRDLWKANMR 77
+L Y P + L +FE A DR+++LK I + ++ K E+ ++ L ++ K
Sbjct: 25 SLQFYLQPPTENISLTEFESLAFDRVKLLKAIENLGVSYVKGTEQYQSKLEAEIRKLKFS 84
Query: 78 HPEASEDV----NKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKRALM 133
+ E ED +D ISHF+LRL YC++EDLR+WF+ E L R+RF + + ++ +
Sbjct: 85 YRENLEDEYEPRRRDHISHFILRLAYCQSEDLRRWFIQQEMDLLRFRFSILPKDKVQSFL 144
Query: 134 EEFDLPCKAISRTEFENAKEKLEQVARSFDQPLPTADAIFYKVPFEEVPELVAGRRVYIH 193
++ L +AIS E ++ + + S ++++ YKVPF + +L GR+VY+
Sbjct: 145 KDTHLHFEAISDEEKTLREQDIMASSPSLSGVRWESESV-YKVPFADALDLFRGRKVYLE 203
Query: 194 KGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEALSMSYLGP 253
G AYV + +V++++ +FR+ LSKAL LT R + Q +RL P++ LS SY G
Sbjct: 204 DGFAYVPLKDIVAIILNEFRATLSKALALTARSLPAV---QSDERLQPLLSHLSHSYTGQ 260
Query: 254 DYSQTKEFGEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRM 313
DYS K G+IS+ +D L+ SFP CMR L LRE+HHL+HGGRMQ GLFLKG+GL +
Sbjct: 261 DYSTQKSTGKISLDQIDSLSTKSFPPCMRQLHKALRENHHLRHGGRMQYGLFLKGIGLTL 320
Query: 314 EDALAFWKAEFSQ-KVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQKII-SSTPGVGD 371
E AL FWK EF + K+ ++FDK Y+Y+IRH++GKEGKRTDYTP+SC KII ++ P GD
Sbjct: 321 EQALQFWKQEFIKGKMDPDKFDKGYSYNIRHSFGKEGKRTDYTPFSCMKIILTNPPSQGD 380
Query: 372 HHGCPYRHFSEENLRAALGRMGVGSRAMEDVVDKVRNRHYQLACTLTFEAVHS-SSCDAG 430
HGCP+RH E L+ + + + + ++D V+ HYQ+AC FE H+ C
Sbjct: 381 FHGCPFRHSDAELLKQKMQTYKIPASGISQILDLVKGNHYQVACQKYFEMTHNVDDCGFS 440
Query: 431 INHPNQYFSDSHKIL 445
+NHPNQ+F +S +IL
Sbjct: 441 LNHPNQFFFESQRIL 455
>gi|74212063|dbj|BAE40196.1| unnamed protein product [Mus musculus]
Length = 505
Score = 341 bits (874), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 178/423 (42%), Positives = 266/423 (62%), Gaps = 13/423 (3%)
Query: 32 VRLEDFEVFAMDRLRVLKGISD-ALARGKRPEEMEN-LVRDLWKANMRHPEASEDV---- 85
+ L +FE A DR+++LK I + ++ K E+ ++ L ++ K + E ED
Sbjct: 37 ISLTEFENLAFDRVKLLKAIENLGVSYVKGTEQYQSKLEAEIRKLKFSYRENLEDEYEPR 96
Query: 86 NKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKRALMEEFDLPCKAISR 145
+D ISHF+LRL YC++EDLR+WF+ E L R+RF + + ++ +++ L +AIS
Sbjct: 97 RRDHISHFILRLAYCQSEDLRRWFIQQEMDLLRFRFSILPKDKVQSFLKDSHLHFEAISD 156
Query: 146 TEFENAKEKLEQVARSFDQPLPTADAIFYKVPFEEVPELVAGRRVYIHKGHAYVAMHQVV 205
E ++ + + S ++++ YKVPF + +L GR+VY+ G AYV + +V
Sbjct: 157 EEKTLREQDIMASSPSLSGIKLESESV-YKVPFADALDLFRGRKVYLEDGFAYVPLKDIV 215
Query: 206 SLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEALSMSYLGPDYSQTKEFGEIS 265
++++ +FR+ LSKAL LT R + Q +RL P++ LS SY G DYS K G+IS
Sbjct: 216 AIILNEFRATLSKALALTARSLPAV---QSDERLQPLLNHLSHSYTGQDYSTQKNTGKIS 272
Query: 266 IKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWKAEFS 325
+ +D L+ SFP CMR L LRE+HHL+HGGRMQ GLFLKG+GL +E AL FWK EF
Sbjct: 273 LDQIDSLSTKSFPPCMRQLHKALRENHHLRHGGRMQYGLFLKGIGLTLEQALQFWKQEFI 332
Query: 326 Q-KVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQKII-SSTPGVGDHHGCPYRHFSEE 383
+ K+ ++FDK Y+Y+IRH++GKEGKRTDYTP+SC KII ++ PG GD+HGCP+RH E
Sbjct: 333 RGKMDPDKFDKGYSYNIRHSFGKEGKRTDYTPFSCMKIILTNPPGQGDYHGCPFRHSDAE 392
Query: 384 NLRAALGRMGVGSRAMEDVVDKVRNRHYQLACTLTFEAVHS-SSCDAGINHPNQYFSDSH 442
L+ + + + + ++D V+ HYQ+AC FE H+ C +NHPNQ+F +S
Sbjct: 393 LLKQKMQSYKIPASGISQILDLVKGNHYQVACQKYFEMTHNVDDCGFSLNHPNQFFFESQ 452
Query: 443 KIL 445
+IL
Sbjct: 453 RIL 455
>gi|403268707|ref|XP_003926410.1| PREDICTED: DNA primase large subunit-like [Saimiri boliviensis
boliviensis]
Length = 505
Score = 341 bits (874), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 184/436 (42%), Positives = 270/436 (61%), Gaps = 19/436 (4%)
Query: 21 LPLYRYAPQLEVRLEDFEVFAMDRLRVLK-----GISDALARGKRPEEMENLVRDL---W 72
L Y P + L +FE A+DR+++LK G++ K +EN +R L +
Sbjct: 26 LQFYLQPPSENISLIEFENLAIDRVKLLKSVENLGVTYLKGTEKYQSVLENELRKLKFSY 85
Query: 73 KANMRHPEASEDVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKRAL 132
+ N+ + E +D ISHF+LRL YC++EDLR+WF+ E L R+RF + + +
Sbjct: 86 RENLE--DEYEPRRRDHISHFILRLAYCQSEDLRRWFIQQEMDLLRFRFSILPKDKIQDF 143
Query: 133 MEEFDLPCKAISRTEFENAKEKLEQVARSFDQPLPTADAIFYKVPFEEVPELVAGRRVYI 192
+++ L +AIS E ++ +E+ E +A S + ++I YK+PF + +L GR+VY+
Sbjct: 144 LKDSHLQFEAISDKE-KSLRER-EIIASSPNLTEFKLESI-YKIPFADALDLFRGRKVYL 200
Query: 193 HKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEALSMSYLG 252
G AYV + +V++++ +FR+ LSKAL LT R + Q +RL P++ LS SY G
Sbjct: 201 EDGFAYVPLKDIVAIILNEFRAKLSKALALTARSLPAV---QSDERLQPLLNHLSHSYTG 257
Query: 253 PDYSQTKEFGEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLR 312
DYS G+IS+ +D L+ SFP CMR L LRE+HHL+HGGRMQ GLFLKG+GL
Sbjct: 258 QDYSTQGNVGKISLDQIDSLSTKSFPPCMRQLHKALRENHHLRHGGRMQYGLFLKGIGLT 317
Query: 313 MEDALAFWKAEFSQ-KVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQKII-SSTPGVG 370
+E AL FWK EF + K+ ++FDK Y+Y+IRH++GKEGKRTDYTP+SC KII S+ P G
Sbjct: 318 LEQALQFWKQEFIKGKMDPDKFDKGYSYNIRHSFGKEGKRTDYTPFSCLKIILSNPPSHG 377
Query: 371 DHHGCPYRHFSEENLRAALGRMGVGSRAMEDVVDKVRNRHYQLACTLTFEAVHS-SSCDA 429
D+HGCP+RH E L+ L + + ++D V+ HYQ+AC FE +H+ C
Sbjct: 378 DYHGCPFRHSDPELLKQKLQSYKISPGGISQILDLVKGTHYQVACQKYFEMIHNVDDCGF 437
Query: 430 GINHPNQYFSDSHKIL 445
+NHPNQ+F +S +IL
Sbjct: 438 SLNHPNQFFFESQRIL 453
>gi|346421439|ref|NP_001231093.1| DNA primase large subunit [Sus scrofa]
Length = 506
Score = 340 bits (873), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 187/459 (40%), Positives = 274/459 (59%), Gaps = 18/459 (3%)
Query: 1 MEIVRSQRSRTNTPNDSVS-----TLPLYRYAPQLEVRLEDFEVFAMDRLRVLKGI-SDA 54
ME +R + +D + +L Y P + L +FE A +RL++LK + S
Sbjct: 1 MEFFGGKRRKLRLADDQRNACYPHSLQFYLQPPSENISLTEFENLAFERLKLLKSVESLG 60
Query: 55 LARGKRPEEMEN-LVRDLWKANMRHPEASEDV----NKDIISHFVLRLVYCRTEDLRKWF 109
++ K E+ ++ L +L K + E ED +D ISHF+LRL YC++EDLR+WF
Sbjct: 61 VSYVKGTEQYQSKLEAELRKLKFSYRENLEDEYEPRRRDHISHFILRLAYCQSEDLRRWF 120
Query: 110 LSMETALYRYRFLLGSSEAKRALMEEFDLPCKAISRTEFENAKEKLEQVARSFDQPLPTA 169
+ E L R+RF + + ++ +++ L +AIS E ++ + + S
Sbjct: 121 IQQEMDLLRFRFHILPKDKVQSFLKDSHLQFEAISDEEKTLREQDIIASSPSLSGTQLEL 180
Query: 170 DAIFYKVPFEEVPELVAGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTS 229
+++ YK+PF + +L GRRVY+ G AYV + +V++++ +FR+ LSKAL LT R +
Sbjct: 181 ESV-YKIPFADALDLFRGRRVYLEDGFAYVPLKDIVAIILNEFRTKLSKALALTARSLPA 239
Query: 230 TIREQERDRLTPIVEALSMSYLGPDYSQTKEFGEISIKDLDQLARSSFPLCMRHLFDKLR 289
Q +RL P++ LS SY G DYS G+IS+ +D L+ SFP CMR L LR
Sbjct: 240 A---QSDERLQPLLNHLSHSYTGQDYSAQGNAGKISLDQIDSLSTKSFPPCMRQLHRALR 296
Query: 290 EDHHLKHGGRMQLGLFLKGVGLRMEDALAFWKAEFSQ-KVGAERFDKEYAYSIRHNYGKE 348
E+HHL+HGGRMQ GLFLKG+GL +E AL FWK EF + K+ ++FDK Y+Y+IRH++GKE
Sbjct: 297 ENHHLRHGGRMQYGLFLKGIGLTLEQALQFWKQEFIKGKMDPDKFDKGYSYNIRHSFGKE 356
Query: 349 GKRTDYTPYSCQKII-SSTPGVGDHHGCPYRHFSEENLRAALGRMGVGSRAMEDVVDKVR 407
GKRTDYTPYSC KII ++ P GD+HGCP+RH E LR L + + ++D V+
Sbjct: 357 GKRTDYTPYSCMKIILTNPPSQGDYHGCPFRHNDPELLRQKLQAYKISPTGIAQILDLVK 416
Query: 408 NRHYQLACTLTFEAVHS-SSCDAGINHPNQYFSDSHKIL 445
HYQ+AC FE H+ C ++HPNQ+F +S KIL
Sbjct: 417 GTHYQVACQKYFEVTHNVDDCGFSLSHPNQFFFESQKIL 455
>gi|296198487|ref|XP_002746723.1| PREDICTED: DNA primase large subunit [Callithrix jacchus]
Length = 505
Score = 340 bits (873), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 182/436 (41%), Positives = 265/436 (60%), Gaps = 19/436 (4%)
Query: 21 LPLYRYAPQLEVRLEDFEVFAMDRLRVLK-----GISDALARGKRPEEMENLVRDL---W 72
L Y P + L +FE A+DR+++LK G+S + ++EN +R L +
Sbjct: 26 LQFYLQPPSENISLIEFENLAIDRVKLLKSVENLGVSYVKGTEQYQSKLENELRKLKFSY 85
Query: 73 KANMRHPEASEDVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKRAL 132
+ N+ + E +D ISHF+LRL YC++EDLR+WF+ E L R+RF + + +
Sbjct: 86 RENLE--DEYEPRRRDHISHFILRLAYCQSEDLRRWFIQQEMDLLRFRFGILPKDKIQDF 143
Query: 133 MEEFDLPCKAISRTEFENAKEKLEQVARSFDQPLPTADAIFYKVPFEEVPELVAGRRVYI 192
+++ L +AIS E + +EK + S + + YK+PF + +L GR+VY+
Sbjct: 144 LKDSHLQFEAISDKE-KTLREK--DIIASSNLNVKLEQESIYKIPFADALDLFRGRKVYL 200
Query: 193 HKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEALSMSYLG 252
G AYV +V++++ +FR+ LSKAL LT R + Q +RL P++ LS SY G
Sbjct: 201 EDGFAYVPPKDIVAIILNEFRAKLSKALALTARSLPAV---QSDERLQPLLNHLSHSYTG 257
Query: 253 PDYSQTKEFGEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLR 312
DYS G+IS+ +D L+ SFP CMR L LRE+HHL+HGGRMQ GLFLKG+GL
Sbjct: 258 QDYSTQGNVGKISLDQIDSLSTKSFPPCMRQLHKALRENHHLRHGGRMQYGLFLKGIGLT 317
Query: 313 MEDALAFWKAEFSQ-KVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQKII-SSTPGVG 370
+E AL FWK EF + K+ ++FDK Y+Y+IRH++GKEGKRTDYTP+SC KII S+ P G
Sbjct: 318 LEQALQFWKQEFIKGKMDPDKFDKGYSYNIRHSFGKEGKRTDYTPFSCLKIILSNPPSHG 377
Query: 371 DHHGCPYRHFSEENLRAALGRMGVGSRAMEDVVDKVRNRHYQLACTLTFEAVHS-SSCDA 429
D+HGCP+RH E L+ L + + ++D V+ HYQ+AC FE +H+ C
Sbjct: 378 DYHGCPFRHSDPELLKQKLQSYKISPGGISQILDLVKGTHYQVACQKYFEMIHNVDDCGF 437
Query: 430 GINHPNQYFSDSHKIL 445
+NHPNQ+F +S +IL
Sbjct: 438 SLNHPNQFFCESQRIL 453
>gi|510408|emb|CAA52378.1| DNA primase (p58 subunit) [Homo sapiens]
Length = 509
Score = 339 bits (870), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 184/440 (41%), Positives = 269/440 (61%), Gaps = 25/440 (5%)
Query: 21 LPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISD-ALARGKRPEEMEN-LVRDLWKANMRH 78
L Y P + L +FE A+DR+++LK + + ++ K E+ ++ L +L K +
Sbjct: 26 LQFYLQPPSENISLTEFENLAIDRVKLLKSVENLGVSYVKGTEQYQSKLESELRKLKFSY 85
Query: 79 PEASEDV----NKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKRALME 134
E ED +D ISHF+LRL YC++E+LR+WF+ E L R+RF + + + ++
Sbjct: 86 REKLEDEYEPRRRDHISHFILRLAYCQSEELRRWFIQQEMDLLRFRFSILPKDKIQDFLK 145
Query: 135 EFDLPCKAISRTEFENAKEKLEQVARSFDQPLPTADAI------FYKVPFEEVPELVAGR 188
+ L +AIS E + +E+ E VA S P+ + YK+PF + +L GR
Sbjct: 146 DSQLQFEAISDEE-KTLREQ-EIVASS-----PSLSGLKLGFESIYKIPFADALDLFRGR 198
Query: 189 RVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEALSM 248
+VY+ G AYV + +V++++ +FR+ LSKAL LT R + Q +RL P++ LS
Sbjct: 199 KVYLEDGFAYVPLKDIVAIILNEFRAKLSKALALTARSLPAV---QSDERLQPLLNHLSH 255
Query: 249 SYLGPDYSQTKEFGEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKG 308
SY G DYS G+IS+ +D L+ SFP CMR L LRE+HHL+HGGRMQ GLFLKG
Sbjct: 256 SYTGQDYSTQGNVGKISLDQIDLLSTKSFPPCMRQLHKALRENHHLRHGGRMQYGLFLKG 315
Query: 309 VGLRMEDALAFWKAEFSQ-KVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQKII-SST 366
+GL +E AL FWK EF + K+ ++FDK Y+Y+IRH++GKEGKRTDYTP+SC KII S+
Sbjct: 316 IGLTLEQALQFWKQEFIKGKMDPDKFDKGYSYNIRHSFGKEGKRTDYTPFSCLKIILSNP 375
Query: 367 PGVGDHHGCPYRHFSEENLRAALGRMGVGSRAMEDVVDKVRNRHYQLACTLTFEAVHS-S 425
P GD+HGCP+RH E L+ L + + ++D V+ HYQ+AC FE +H+
Sbjct: 376 PSQGDYHGCPFRHSDPELLKQKLQSYKISPGGISQILDLVKGTHYQVACQKYFEMIHNVD 435
Query: 426 SCDAGINHPNQYFSDSHKIL 445
C +NHPNQ+F +S +IL
Sbjct: 436 DCGFSLNHPNQFFCESQRIL 455
>gi|41349495|ref|NP_000938.2| DNA primase large subunit [Homo sapiens]
gi|51338777|sp|P49643.2|PRI2_HUMAN RecName: Full=DNA primase large subunit; AltName: Full=DNA primase
58 kDa subunit; Short=p58
gi|40675622|gb|AAH64931.1| Primase, DNA, polypeptide 2 (58kDa) [Homo sapiens]
gi|167774191|gb|ABZ92530.1| primase, DNA, polypeptide 2 (58kDa) [synthetic construct]
Length = 509
Score = 338 bits (867), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 184/440 (41%), Positives = 269/440 (61%), Gaps = 25/440 (5%)
Query: 21 LPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISD-ALARGKRPEEMEN-LVRDLWKANMRH 78
L Y P + L +FE A+DR+++LK + + ++ K E+ ++ L +L K +
Sbjct: 26 LQFYLQPPSENISLIEFENLAIDRVKLLKSVENLGVSYVKGTEQYQSKLESELRKLKFSY 85
Query: 79 PEASEDV----NKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKRALME 134
E ED +D ISHF+LRL YC++E+LR+WF+ E L R+RF + + + ++
Sbjct: 86 RENLEDEYEPRRRDHISHFILRLAYCQSEELRRWFIQQEMDLLRFRFSILPKDKIQDFLK 145
Query: 135 EFDLPCKAISRTEFENAKEKLEQVARSFDQPLPTADAI------FYKVPFEEVPELVAGR 188
+ L +AIS E + +E+ E VA S P+ + YK+PF + +L GR
Sbjct: 146 DSQLQFEAISDEE-KTLREQ-EIVASS-----PSLSGLKLGFESIYKIPFADALDLFRGR 198
Query: 189 RVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEALSM 248
+VY+ G AYV + +V++++ +FR+ LSKAL LT R + Q +RL P++ LS
Sbjct: 199 KVYLEDGFAYVPLKDIVAIILNEFRAKLSKALALTARSLPAV---QSDERLQPLLNHLSH 255
Query: 249 SYLGPDYSQTKEFGEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKG 308
SY G DYS G+IS+ +D L+ SFP CMR L LRE+HHL+HGGRMQ GLFLKG
Sbjct: 256 SYTGQDYSTQGNVGKISLDQIDLLSTKSFPPCMRQLHKALRENHHLRHGGRMQYGLFLKG 315
Query: 309 VGLRMEDALAFWKAEFSQ-KVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQKII-SST 366
+GL +E AL FWK EF + K+ ++FDK Y+Y+IRH++GKEGKRTDYTP+SC KII S+
Sbjct: 316 IGLTLEQALQFWKQEFIKGKMDPDKFDKGYSYNIRHSFGKEGKRTDYTPFSCLKIILSNP 375
Query: 367 PGVGDHHGCPYRHFSEENLRAALGRMGVGSRAMEDVVDKVRNRHYQLACTLTFEAVHS-S 425
P GD+HGCP+RH E L+ L + + ++D V+ HYQ+AC FE +H+
Sbjct: 376 PSQGDYHGCPFRHSDPELLKQKLQSYKISPGGISQILDLVKGTHYQVACQKYFEMIHNVD 435
Query: 426 SCDAGINHPNQYFSDSHKIL 445
C +NHPNQ+F +S +IL
Sbjct: 436 DCGFSLNHPNQFFCESQRIL 455
>gi|410222298|gb|JAA08368.1| primase, DNA, polypeptide 2 (58kDa) [Pan troglodytes]
gi|410265700|gb|JAA20816.1| primase, DNA, polypeptide 2 (58kDa) [Pan troglodytes]
gi|410265702|gb|JAA20817.1| primase, DNA, polypeptide 2 (58kDa) [Pan troglodytes]
gi|410265704|gb|JAA20818.1| primase, DNA, polypeptide 2 (58kDa) [Pan troglodytes]
gi|410293116|gb|JAA25158.1| primase, DNA, polypeptide 2 (58kDa) [Pan troglodytes]
gi|410335389|gb|JAA36641.1| primase, DNA, polypeptide 2 (58kDa) [Pan troglodytes]
gi|410335391|gb|JAA36642.1| primase, DNA, polypeptide 2 (58kDa) [Pan troglodytes]
Length = 509
Score = 338 bits (867), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 184/440 (41%), Positives = 269/440 (61%), Gaps = 25/440 (5%)
Query: 21 LPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISD-ALARGKRPEEMEN-LVRDLWKANMRH 78
L Y P + L +FE A+DR+++LK + + ++ K E+ ++ L +L K +
Sbjct: 26 LQFYLQPPSENISLIEFENLAIDRVKLLKSVENLGVSYVKGTEQYQSKLESELRKLKFSY 85
Query: 79 PEASEDV----NKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKRALME 134
E ED +D ISHF+LRL YC++E+LR+WF+ E L R+RF + + + ++
Sbjct: 86 RENLEDEYEPRRRDHISHFILRLAYCQSEELRRWFIQQEMDLLRFRFSILPKDKIQDFLK 145
Query: 135 EFDLPCKAISRTEFENAKEKLEQVARSFDQPLPTADAI------FYKVPFEEVPELVAGR 188
+ L +AIS E + +E+ E VA S P+ + YK+PF + +L GR
Sbjct: 146 DSQLQFEAISDEE-KTLREQ-EIVASS-----PSLSGLKLGFESIYKIPFADALDLFRGR 198
Query: 189 RVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEALSM 248
+VY+ G AYV + +V++++ +FR+ LSKAL LT R + Q +RL P++ LS
Sbjct: 199 KVYLEDGFAYVPLKDIVAIILNEFRAKLSKALALTARSLPAV---QSDERLQPLLNHLSH 255
Query: 249 SYLGPDYSQTKEFGEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKG 308
SY G DYS G+IS+ +D L+ SFP CMR L LRE+HHL+HGGRMQ GLFLKG
Sbjct: 256 SYTGQDYSTQGNVGKISLDQIDLLSTKSFPPCMRQLHKALRENHHLRHGGRMQYGLFLKG 315
Query: 309 VGLRMEDALAFWKAEFSQ-KVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQKII-SST 366
+GL +E AL FWK EF + K+ ++FDK Y+Y+IRH++GKEGKRTDYTP+SC KII S+
Sbjct: 316 IGLTLEQALQFWKQEFIKGKMDPDKFDKGYSYNIRHSFGKEGKRTDYTPFSCLKIILSNP 375
Query: 367 PGVGDHHGCPYRHFSEENLRAALGRMGVGSRAMEDVVDKVRNRHYQLACTLTFEAVHS-S 425
P GD+HGCP+RH E L+ L + + ++D V+ HYQ+AC FE +H+
Sbjct: 376 PSQGDYHGCPFRHSDPELLKQKLQSYKISPGGISQILDLVKGTHYQVACQKYFEMIHNVD 435
Query: 426 SCDAGINHPNQYFSDSHKIL 445
C +NHPNQ+F +S +IL
Sbjct: 436 DCGFSLNHPNQFFCESQRIL 455
>gi|158257262|dbj|BAF84604.1| unnamed protein product [Homo sapiens]
Length = 509
Score = 338 bits (866), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 184/440 (41%), Positives = 269/440 (61%), Gaps = 25/440 (5%)
Query: 21 LPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISD-ALARGKRPEEMEN-LVRDLWKANMRH 78
L Y P + L +FE A+DR+++LK + + ++ K E+ ++ L +L K +
Sbjct: 26 LQFYLQPPSENISLIEFENLAIDRVKLLKSVENLGVSYVKGTEQYQSKLESELRKLKFSY 85
Query: 79 PEASEDV----NKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKRALME 134
E ED +D ISHF+LRL YC++E+LR+WF+ E L R+RF + + + ++
Sbjct: 86 RENLEDEYEPRRRDHISHFILRLAYCQSEELRRWFIQQEMDLLRFRFSILPKDKIQDFLK 145
Query: 135 EFDLPCKAISRTEFENAKEKLEQVARSFDQPLPTADAI------FYKVPFEEVPELVAGR 188
+ L +AIS E + +E+ E VA S P+ + YK+PF + +L GR
Sbjct: 146 DSQLQFEAISDEE-KTLREQ-EIVASS-----PSLSGLRLGFESIYKIPFADALDLFRGR 198
Query: 189 RVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEALSM 248
+VY+ G AYV + +V++++ +FR+ LSKAL LT R + Q +RL P++ LS
Sbjct: 199 KVYLEDGFAYVPLKDIVAIILNEFRAKLSKALALTARSLPAV---QSDERLQPLLNHLSH 255
Query: 249 SYLGPDYSQTKEFGEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKG 308
SY G DYS G+IS+ +D L+ SFP CMR L LRE+HHL+HGGRMQ GLFLKG
Sbjct: 256 SYTGQDYSTQGNVGKISLDQIDLLSTKSFPPCMRQLHKALRENHHLRHGGRMQYGLFLKG 315
Query: 309 VGLRMEDALAFWKAEFSQ-KVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQKII-SST 366
+GL +E AL FWK EF + K+ ++FDK Y+Y+IRH++GKEGKRTDYTP+SC KII S+
Sbjct: 316 IGLTLEQALQFWKQEFIKGKMDPDKFDKGYSYNIRHSFGKEGKRTDYTPFSCLKIILSNP 375
Query: 367 PGVGDHHGCPYRHFSEENLRAALGRMGVGSRAMEDVVDKVRNRHYQLACTLTFEAVHS-S 425
P GD+HGCP+RH E L+ L + + ++D V+ HYQ+AC FE +H+
Sbjct: 376 PSQGDYHGCPFRHSDPELLKQKLQSYKISPGGISQILDLVKGTHYQVACQKYFEMIHNVD 435
Query: 426 SCDAGINHPNQYFSDSHKIL 445
C +NHPNQ+F +S +IL
Sbjct: 436 DCGFSLNHPNQFFCESQRIL 455
>gi|388453513|ref|NP_001253529.1| DNA primase large subunit [Macaca mulatta]
gi|380789663|gb|AFE66707.1| DNA primase large subunit [Macaca mulatta]
gi|380814456|gb|AFE79102.1| DNA primase large subunit [Macaca mulatta]
gi|383419801|gb|AFH33114.1| DNA primase large subunit [Macaca mulatta]
gi|383419803|gb|AFH33115.1| DNA primase large subunit [Macaca mulatta]
gi|383419805|gb|AFH33116.1| DNA primase large subunit [Macaca mulatta]
Length = 509
Score = 337 bits (865), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 182/438 (41%), Positives = 268/438 (61%), Gaps = 21/438 (4%)
Query: 21 LPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISD-ALARGKRPEEMEN-LVRDLWKANMRH 78
L Y P + L +FE A+DR+++LK + + ++ K E+ ++ L +L K +
Sbjct: 26 LQFYLQPPSENISLIEFENLAIDRVKLLKSVENLGVSYVKGTEQYQSKLESELRKLKFSY 85
Query: 79 PEASEDV----NKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKRALME 134
E ED +D ISHF+LRL YC++E+LR+WF+ E L R+RF + + + ++
Sbjct: 86 RENLEDEYEPRRRDHISHFILRLAYCQSEELRRWFIQQEMDLLRFRFSILPKDKIQDFLK 145
Query: 135 EFDLPCKAISRTEFENAKEKLEQVARSFDQPLPTADAI----FYKVPFEEVPELVAGRRV 190
+ L +AIS E + +E+ E +A S P + + YK+PF + +L GR+V
Sbjct: 146 DSQLQFEAISDEE-KTLREQ-EIIASS---PNSSGSKVVLESIYKIPFADALDLFRGRKV 200
Query: 191 YIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEALSMSY 250
Y+ G AYV + +V++++ +FR+ LSKAL LT R + Q +RL P++ LS SY
Sbjct: 201 YLEDGFAYVPLKDIVAIILNEFRAKLSKALALTARSLPAV---QSDERLQPLLNHLSHSY 257
Query: 251 LGPDYSQTKEFGEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVG 310
G DYS G+IS+ +D L+ SFP CMR L LRE+HHL+HGGRMQ GLFLKG+G
Sbjct: 258 TGQDYSTQGNVGKISLDQIDSLSTKSFPPCMRQLHKALRENHHLRHGGRMQYGLFLKGIG 317
Query: 311 LRMEDALAFWKAEFSQ-KVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQKII-SSTPG 368
L +E AL FWK EF + K+ ++FDK Y+Y+IRH++GKEGKRTDYTP+SC KII S+ P
Sbjct: 318 LTLEQALQFWKQEFIKGKMDPDKFDKGYSYNIRHSFGKEGKRTDYTPFSCLKIILSNPPS 377
Query: 369 VGDHHGCPYRHFSEENLRAALGRMGVGSRAMEDVVDKVRNRHYQLACTLTFEAVHS-SSC 427
GD+HGCP+RH E L+ L + + ++D + HYQ+AC FE +H+ C
Sbjct: 378 QGDYHGCPFRHSDPELLKQKLQSYKISPGGISQILDLAKGTHYQVACQKYFEMIHNVDDC 437
Query: 428 DAGINHPNQYFSDSHKIL 445
+NHPNQ+F +S +IL
Sbjct: 438 GFSLNHPNQFFCESQRIL 455
>gi|297678436|ref|XP_002817077.1| PREDICTED: DNA primase large subunit [Pongo abelii]
Length = 509
Score = 337 bits (864), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 180/434 (41%), Positives = 264/434 (60%), Gaps = 13/434 (2%)
Query: 21 LPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISD-ALARGKRPEEMEN-LVRDLWKANMRH 78
L Y P + L +FE A+DR+++LK + + ++ K E+ ++ L +L K +
Sbjct: 26 LQFYLQPPCENISLIEFENLAIDRVKLLKSVENLGVSYMKGTEQYQSKLESELRKLKFSY 85
Query: 79 PEASEDV----NKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKRALME 134
E ED +D ISHF+LRL YC++E+LR+WF+ E L R+RF + + + ++
Sbjct: 86 RENLEDEYEPRRRDHISHFILRLAYCQSEELRRWFIQQEMDLLRFRFSILPKDKIQDFLK 145
Query: 135 EFDLPCKAISRTEFENAKEKLEQVARSFDQPLPTADAIFYKVPFEEVPELVAGRRVYIHK 194
+ L +AIS E +++ + S L YK+PF + +L GR+VY+
Sbjct: 146 DSQLQFEAISDEEKTLRDQEIIASSPSLSG-LKLGFESIYKIPFADALDLFRGRKVYLED 204
Query: 195 GHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEALSMSYLGPD 254
G AYV + +V++++ +FR+ LSKAL LT R + Q +RL P++ LS SY G D
Sbjct: 205 GFAYVPLKDIVAIILNEFRAKLSKALALTARSLPAV---QSDERLQPLLNHLSHSYTGQD 261
Query: 255 YSQTKEFGEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRME 314
YS G+IS+ +D L+ SFP CMR L LRE+HHL+HGGRMQ GLFLKG+GL +E
Sbjct: 262 YSTQGNVGKISLDQIDSLSTKSFPPCMRQLHKALRENHHLRHGGRMQYGLFLKGIGLTLE 321
Query: 315 DALAFWKAEFSQ-KVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQKII-SSTPGVGDH 372
AL FWK EF + K+ ++FDK Y+Y+IRH++GKEGKRTDYTP+SC KII S+ P GD+
Sbjct: 322 QALQFWKQEFIKGKMDPDKFDKGYSYNIRHSFGKEGKRTDYTPFSCLKIILSNPPSQGDY 381
Query: 373 HGCPYRHFSEENLRAALGRMGVGSRAMEDVVDKVRNRHYQLACTLTFEAVHS-SSCDAGI 431
HGCP+RH E L+ L + + ++D V+ HYQ+AC FE +H+ C +
Sbjct: 382 HGCPFRHSDPELLKQKLQSYKISPGGISQILDLVKGTHYQVACQKYFEMIHNVDDCGFSL 441
Query: 432 NHPNQYFSDSHKIL 445
NHPNQ+F +S +IL
Sbjct: 442 NHPNQFFCESQRIL 455
>gi|355748666|gb|EHH53149.1| hypothetical protein EGM_13725 [Macaca fascicularis]
Length = 509
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 181/438 (41%), Positives = 268/438 (61%), Gaps = 21/438 (4%)
Query: 21 LPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISD-ALARGKRPEEMEN-LVRDLWKANMRH 78
L Y P + L +FE A+DR+++LK + + ++ K E+ ++ L +L K +
Sbjct: 26 LQFYLQPPSENISLIEFENLAIDRVKLLKSVENLGVSYVKGTEQYQSKLESELRKLKFSY 85
Query: 79 PEASEDV----NKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKRALME 134
E ED +D ISHF+LRL YC++E+LR+WF+ E L R+RF + + + ++
Sbjct: 86 RENLEDEYEPRRRDHISHFILRLAYCQSEELRRWFIQQEMDLLRFRFSILPKDKIQDFLK 145
Query: 135 EFDLPCKAISRTEFENAKEKLEQVARSFDQPLPTADAI----FYKVPFEEVPELVAGRRV 190
+ L +AIS E + +E+ E +A S P + + YK+PF + +L GR++
Sbjct: 146 DSQLQFEAISDEE-KTLREQ-EIIASS---PNSSGSKVVLESIYKIPFADALDLFRGRKI 200
Query: 191 YIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEALSMSY 250
Y+ G AYV + +V++++ +FR+ LSKAL LT R + Q +RL P++ LS SY
Sbjct: 201 YLEDGFAYVPLKDIVAIILNEFRAKLSKALALTARSLPAV---QSDERLQPLLNHLSHSY 257
Query: 251 LGPDYSQTKEFGEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVG 310
G DYS G+IS+ +D L+ SFP CMR L LRE+HHL+HGGRMQ GLFLKG+G
Sbjct: 258 TGQDYSTQGNVGKISLDQIDSLSTKSFPPCMRQLHKALRENHHLRHGGRMQYGLFLKGIG 317
Query: 311 LRMEDALAFWKAEFSQ-KVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQKII-SSTPG 368
L +E AL FWK EF + K+ ++FDK Y+Y+IRH++GKEGKRTDYTP+SC KII S+ P
Sbjct: 318 LTLEQALQFWKQEFIKGKMDPDKFDKGYSYNIRHSFGKEGKRTDYTPFSCLKIILSNPPS 377
Query: 369 VGDHHGCPYRHFSEENLRAALGRMGVGSRAMEDVVDKVRNRHYQLACTLTFEAVHS-SSC 427
GD+HGCP+RH E L+ L + + ++D + HYQ+AC FE +H+ C
Sbjct: 378 QGDYHGCPFRHSDPELLKQKLQSYKISPGGISQILDLAKGTHYQVACQKYFEMIHNVDDC 437
Query: 428 DAGINHPNQYFSDSHKIL 445
+NHPNQ+F +S +IL
Sbjct: 438 GFSLNHPNQFFCESQRIL 455
>gi|417402018|gb|JAA47870.1| Putative eukaryotic-type dna primase large subunit [Desmodus
rotundus]
Length = 505
Score = 336 bits (861), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 179/437 (40%), Positives = 265/437 (60%), Gaps = 19/437 (4%)
Query: 20 TLPLYRYAPQLEVRLEDFEVFAMDRLRVLK-----GISDALARGKRPEEMENLVRDL--- 71
+L Y P + L +FE A+DR+++LK G+S + ++E +R +
Sbjct: 25 SLQFYLQPPTENISLMEFENLAIDRVKLLKAVEHLGVSYVKGSEQYQSKLEAEIRKVKFS 84
Query: 72 WKANMRHPEASEDVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKRA 131
++ N+ + E +D ISHF+LRL YC++EDLR+WF+ E L R+RF + + +
Sbjct: 85 FRENLEN--EYEARRRDHISHFILRLAYCQSEDLRRWFIQQEMDLLRFRFSILPKDKIQD 142
Query: 132 LMEEFDLPCKAISRTEFENAKEKLEQVARSFDQPLPTADAIFYKVPFEEVPELVAGRRVY 191
+++ L +A+S E + +EK + S + YK+PF + +L GR+VY
Sbjct: 143 FLKDSHLQFEAVSGEE-KTLREK--DITASSPGSSGAMLELVYKIPFADALDLFRGRKVY 199
Query: 192 IHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEALSMSYL 251
+ G AYV + +V++++ +FR+ LSKAL LT R + Q +RL P+++ LS Y
Sbjct: 200 LEGGFAYVPLKDIVAIILNEFRTKLSKALALTARSLPAV---QSDERLQPLLKHLSHCYT 256
Query: 252 GPDYSQTKEFGEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGL 311
G DYS G+I++ +D L+ SFP CMR L LRE+HHL+HGGRMQ GLFLKG+GL
Sbjct: 257 GQDYSTQGNVGKIALDQIDPLSAISFPPCMRQLHKALRENHHLRHGGRMQYGLFLKGIGL 316
Query: 312 RMEDALAFWKAEFSQ-KVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQKII-SSTPGV 369
+E AL FWK EF + K+ ++FDK YAY+IRH++GKEGKRTDYTP+SC KII ++ PG
Sbjct: 317 TLEQALQFWKQEFIRGKMDPDKFDKGYAYNIRHSFGKEGKRTDYTPFSCMKIILNNPPGQ 376
Query: 370 GDHHGCPYRHFSEENLRAALGRMGVGSRAMEDVVDKVRNRHYQLACTLTFEAVHS-SSCD 428
GD+HGCP+RH E L+ L + + ++D V+ HYQ+AC FE H+ C
Sbjct: 377 GDYHGCPFRHSDPELLKQKLQSYKISPAGINQILDLVKRTHYQVACQKYFEMTHNVDDCG 436
Query: 429 AGINHPNQYFSDSHKIL 445
+NHPNQ+F +S KIL
Sbjct: 437 FSLNHPNQFFIESQKIL 453
>gi|198430609|ref|XP_002127095.1| PREDICTED: similar to DNA primase large subunit (DNA primase 58 kDa
subunit) (p58) [Ciona intestinalis]
Length = 526
Score = 335 bits (859), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 170/452 (37%), Positives = 272/452 (60%), Gaps = 24/452 (5%)
Query: 21 LPLYRYAPQLEVRLEDFEVFAMDRLRVLK-----GISDALARGKRPEEMENLVRDLWKAN 75
L +Y P + + L++FE FA +R++VL +S E++ +R +
Sbjct: 30 LMMYNEPPSVNITLQEFESFAFERVKVLHFLDSLSVSAVKNSTAYNEKLTEFLRKNYPGF 89
Query: 76 MRHPEASEDVN--------KDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSE 127
+ +V+ KD +SHF+LRL YCR+E+LR+WFL E L+++RFL SS
Sbjct: 90 LLQTATGREVSDAELNWRRKDHVSHFILRLAYCRSEELRRWFLDKELDLFKFRFLQESSS 149
Query: 128 AKRALMEEFDLPCKAISRTEFENAKEKLEQVARSFD-QPLPTADAIFYKVPFEEVPELVA 186
+ +A ++ +L + IS+ E L S+D +++FY+VPF +V LV+
Sbjct: 150 SIQAFLKLNNLTYEPISKEERTRYSAAL--CTSSYDMNEANVENSLFYRVPFIDVLNLVS 207
Query: 187 GRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEAL 246
R+V++H+G A+V + +S++ T+FR +LSKAL +T+R + + E DRL P++ +
Sbjct: 208 SRKVFLHQGDAFVPQKEFLSIISTRFREHLSKALAMTSR---ALPQLDEDDRLLPMLRSF 264
Query: 247 SMSYLGPDYSQTKEFGEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFL 306
+ + + Y K G++++ DL++L++ S+PLCMR + L+E HHL+H RMQ GLFL
Sbjct: 265 NQTAVTSAYDPKKNEGKVTVSDLEELSKISYPLCMRQVHSSLKETHHLRHWARMQYGLFL 324
Query: 307 KGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQKIIS-S 365
K +G+ +ED+L FW+ E + +G ++FDK+YAY+IRHNYGKEGKRT+YTPYSC II+ +
Sbjct: 325 KAIGVTLEDSLKFWRQELGKGIGIDKFDKQYAYNIRHNYGKEGKRTNYTPYSCMTIITKN 384
Query: 366 TPGVGDHHGCPYRHFSEENLRAALGRMGVGSRAMEDVVDKVRNRHYQLACTLTFEAVHS- 424
P DHHGCP++H S + LR L + +E+++ V+ +H+Q+AC FE H
Sbjct: 385 PPSAQDHHGCPFKHTSPDLLRQKLKSYKTSTDVIEEIITLVKAQHFQIACGKYFEVTHKM 444
Query: 425 SSCDAGINHPNQYFSDSHKIL---QPKNNNAA 453
+ HPN YF +S KIL +P N ++A
Sbjct: 445 EGTSFQVTHPNHYFDESQKILKGEKPTNKSSA 476
>gi|410959463|ref|XP_003986328.1| PREDICTED: DNA primase large subunit-like [Felis catus]
Length = 509
Score = 332 bits (852), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 180/438 (41%), Positives = 262/438 (59%), Gaps = 17/438 (3%)
Query: 20 TLPLYRYAPQLEVRLEDFEVFAMDRLRVLK-----GISDALARGKRPEEMENLVRDL--- 71
+L Y P + L +FE A+DR+++LK G+S + ++E +R L
Sbjct: 25 SLQFYLEPPSENISLIEFESLAIDRVKLLKTVENLGVSHVKGTEQYQSKLEAEIRRLKFS 84
Query: 72 WKANMRHPEASEDVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKRA 131
++ N+ + E +D ISHF+LRL YC++EDLR+WF+ E L R+RF + + ++
Sbjct: 85 FRENVEN--EYERRRRDHISHFILRLAYCQSEDLRRWFIQQEMDLLRFRFSILPKDKIQS 142
Query: 132 LMEEFDLPCKAISRTEFE-NAKEKLEQVARSFDQPLPTADAIFYKVPFEEVPELVAGRRV 190
+++ L +AIS E E + S YK+PF + +L GR+V
Sbjct: 143 FLKDSHLHFEAISDEERSLREHEIIASSTSSSASKSELELESVYKIPFADALDLFRGRKV 202
Query: 191 YIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEALSMSY 250
Y+ G AYV + +V++V+ +FR+ LSKAL LT R + Q +RL P++ LS SY
Sbjct: 203 YLEDGFAYVPLKDIVAIVLNEFRAKLSKALALTARSLPAV---QSDERLQPLLNHLSHSY 259
Query: 251 LGPDYSQTKEFGEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVG 310
G DYS G+IS+ +D L+ SFP CMR L LRE+HHL+HGGRMQ GLFLKG+G
Sbjct: 260 TGQDYSTQGNAGKISLDQIDSLSTKSFPPCMRQLHKALRENHHLRHGGRMQYGLFLKGIG 319
Query: 311 LRMEDALAFWKAEFSQ-KVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQKII-SSTPG 368
L +E AL FWK EF + K+ ++FDK Y+Y+IRH++GKEGKRTDYTP+SC KII ++ PG
Sbjct: 320 LTLEQALQFWKQEFIRGKMDPDKFDKGYSYNIRHSFGKEGKRTDYTPFSCMKIILTNPPG 379
Query: 369 VGDHHGCPYRHFSEENLRAALGRMGVGSRAMEDVVDKVRNRHYQLACTLTFEAVHS-SSC 427
GD+HGCP+RH E L+ L + + ++D V+ HYQ+AC FE H+ C
Sbjct: 380 QGDYHGCPFRHSDPELLKQKLQSYKISPDGISQILDLVKGTHYQVACQKYFEMTHNVDDC 439
Query: 428 DAGINHPNQYFSDSHKIL 445
++HPNQ+F +S +IL
Sbjct: 440 GFSLSHPNQFFFESQRIL 457
>gi|241599282|ref|XP_002404974.1| DNA primase 58 KD subunit, putative [Ixodes scapularis]
gi|215502423|gb|EEC11917.1| DNA primase 58 KD subunit, putative [Ixodes scapularis]
Length = 521
Score = 331 bits (849), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 186/437 (42%), Positives = 258/437 (59%), Gaps = 17/437 (3%)
Query: 19 STLPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKR--PEEMENLVRDLWKANM 76
S L Y AP ++ LE+FE A++RL+VL+ A A+ + E +++V DL + +
Sbjct: 26 SLLQFYHKAPTDDISLEEFEQLAVERLKVLRAFEIAAAKFNKFSQEYRDSVVADLRRQKL 85
Query: 77 RHPEASED------VNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKR 130
H ED + KD ISHF+L L +C+T+DLR+WF+ ME L+R+R S +
Sbjct: 86 -HAYVPEDSAGAAILRKDNISHFILLLAFCQTQDLRRWFIGMEIDLFRFRLQNESQAGLQ 144
Query: 131 ALMEEFDLPCKAISRTEFENAKEKLEQVARSFD-QPLPTADAIFYKVPFEEVPELVAGRR 189
+ + KAIS E E + +R L T D YKVPF EV +LV+ R
Sbjct: 145 DFFRDSKMDFKAISAEEKAAHAEDIIDSSRDLTATKLETMDV--YKVPFTEVLKLVSERA 202
Query: 190 VYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEALSMS 249
V++ G AYV + ++V +++R +LS+ L T R R E DRL PI+ AL+
Sbjct: 203 VFLRGGEAYVPAESIGAVVESRYRVHLSQMLAQTARALP---RLDEEDRLLPILRALTKM 259
Query: 250 YLGPDYSQTKEFGEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGV 309
+G + + ++ + +DQL++ SFPLCM+ + LR +HHL+HG RMQ GLFLKGV
Sbjct: 260 EVGCGFDAAQATDAVTPEMIDQLSKESFPLCMKSIHTALRSNHHLRHGARMQYGLFLKGV 319
Query: 310 GLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQKIISST-PG 368
GL ++DAL FW+ EFS+ VGAE FDK Y+Y+IRHNYG EGKRT+YTPYSC KII++ PG
Sbjct: 320 GLGLQDALRFWREEFSKHVGAENFDKRYSYNIRHNYGTEGKRTNYTPYSCGKIITTNPPG 379
Query: 369 VGDHHGCPYRHFSEENLRAALGRMGVGSRAMEDVVDKVRNRHYQLACTLTFEAVHSSSCD 428
GD HGCP+RHF + L L GV + +V+D V HYQLACT TF S
Sbjct: 380 PGDAHGCPFRHFDHKKLEERLKEEGVRDANLREVMDYVDKGHYQLACTATFRITQKSPEL 439
Query: 429 AG-INHPNQYFSDSHKI 444
A I HPN+Y+ S +
Sbjct: 440 AQVIGHPNEYYQLSRQF 456
>gi|302844662|ref|XP_002953871.1| hypothetical protein VOLCADRAFT_64063 [Volvox carteri f.
nagariensis]
gi|300260979|gb|EFJ45195.1| hypothetical protein VOLCADRAFT_64063 [Volvox carteri f.
nagariensis]
Length = 400
Score = 330 bits (846), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 162/358 (45%), Positives = 222/358 (62%), Gaps = 5/358 (1%)
Query: 83 EDVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKRALMEEFDLPCKA 142
E++ D+ISHFVLRL YCRT +LRKWFL+ E L+R +F ++ A + +
Sbjct: 11 EELRNDLISHFVLRLAYCRTAELRKWFLAQECELFRLKFGTYNAAEHEAFLAAHAPQYRP 70
Query: 143 ISRTEFENAKEKLEQVARSFDQPLPTADAIFYKVPFEEVPELVAGRRVYIHKGHAYVAMH 202
+ E + ++ QV R+ D FYKV + VPELV+ RRV + G AYV+
Sbjct: 71 VPAAELDELLPEIVQVGRARAVLRAQQDRRFYKVSWSRVPELVSQRRVLLRGGWAYVSRD 130
Query: 203 QVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEALSMSYLGPDYSQTKEFG 262
+ LV+T+FR+ +SK L RKW +E RL P+V +L Y G ++G
Sbjct: 131 ALAPLVITEFRTGISKGLSEMARKWRQMFPAEEEQRLQPLVASLVADYSG----VATKYG 186
Query: 263 EISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWKA 322
++S+ L QLA FPLCM HL L + HL+HGGR QLGLFLK +GL +E+AL FW++
Sbjct: 187 DVSVATLHQLASRHFPLCMSHLMAALHSERHLRHGGRQQLGLFLKAIGLPLEEALIFWRS 246
Query: 323 EFSQKVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQKIISSTPGVGDHHGCPYRHFSE 382
EF+ + A++FDK+YAY+IRHNYG+EGKRTDYT ++C I+ + G GDHHGCPYR E
Sbjct: 247 EFAPRTPADQFDKQYAYNIRHNYGREGKRTDYTAHNCTTIVGFSGGPGDHHGCPYRRLDE 306
Query: 383 ENLRAALGRMGVGSRAMEDVVDKVRNRHYQLACTLTFEAVHS-SSCDAGINHPNQYFS 439
+LRAALGR+ R +E+ V K R+ HYQLAC FE +H D GI+ P QY++
Sbjct: 307 PSLRAALGRLRCDDRKIEEAVSKARDGHYQLACAAAFEGMHRVPEMDVGISAPLQYYA 364
>gi|431838245|gb|ELK00177.1| DNA primase large subunit [Pteropus alecto]
Length = 525
Score = 330 bits (845), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 175/435 (40%), Positives = 260/435 (59%), Gaps = 13/435 (2%)
Query: 20 TLPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEEM--ENLVRDLWKANMR 77
+L Y P + L +FE A+DR+++LK + + + E+ L ++ K
Sbjct: 44 SLQFYLQPPSENISLIEFENLAIDRVKLLKVVENLGVSYVKGTELYQSKLEAEIRKVKFS 103
Query: 78 HPEASEDV----NKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKRALM 133
E ED +D ISHF+LRL YC++EDLR+WF+ E L R+RF + + + +
Sbjct: 104 FRENLEDEYEPRRRDHISHFILRLAYCQSEDLRRWFIQQEMDLLRFRFSILPKDKIQDFL 163
Query: 134 EEFDLPCKAISRTEFENAKEKLEQVARSFDQPLPTADAIFYKVPFEEVPELVAGRRVYIH 193
++ L +AI E ++++ + S +++ YK+PF + +L GR+VY+
Sbjct: 164 KDSHLHFEAIKDEERTLREKEIIASSPSLSGTKWELESV-YKIPFADALDLFRGRKVYLE 222
Query: 194 KGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEALSMSYLGP 253
G AYV + +V++V+ +FR+ LSKAL LT R + Q +RL P++ LS SY G
Sbjct: 223 DGFAYVPLKDIVAIVLNEFRTKLSKALALTARSLPTV---QADERLQPLLNHLSHSYTGQ 279
Query: 254 DYSQTKEFGEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRM 313
DYS G+IS+ +D + SFP CMR L LRE+HHL+HGGRMQ GLFLKG+GL +
Sbjct: 280 DYSTQGNVGKISLDQIDSFSTKSFPPCMRQLHKALRENHHLRHGGRMQYGLFLKGIGLTL 339
Query: 314 EDALAFWKAEFSQ-KVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQKII-SSTPGVGD 371
E AL FWK EF + K+ ++FDK Y+Y+IRH++GKEGKRTDYTP+SC KII ++ P GD
Sbjct: 340 EQALQFWKQEFIKGKMDPDKFDKGYSYNIRHSFGKEGKRTDYTPFSCMKIILTNPPSQGD 399
Query: 372 HHGCPYRHFSEENLRAALGRMGVGSRAMEDVVDKVRNRHYQLACTLTFEAVHS-SSCDAG 430
+HGCP+RH E L+ L + + ++D V+ HYQ+AC FE H+ C
Sbjct: 400 YHGCPFRHSDPELLKQKLQSYKISPGGINQILDLVKGSHYQVACQKYFEMTHNVDDCGFS 459
Query: 431 INHPNQYFSDSHKIL 445
++HPNQ+F +S +IL
Sbjct: 460 LSHPNQFFIESQRIL 474
>gi|299471290|emb|CBN79116.1| DNA primase [Ectocarpus siliculosus]
Length = 520
Score = 327 bits (839), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 178/454 (39%), Positives = 271/454 (59%), Gaps = 31/454 (6%)
Query: 20 TLPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEEM-----ENLVRDLWKA 74
+ +Y AP E+ L++FE+ A+DRL+VL+ I D AR R ++ E+L + + +
Sbjct: 26 AISMYNEAPFEEITLDEFELVALDRLQVLRKIEDLKARNVRGDDFRRALRESLHKYMKLS 85
Query: 75 NMRHPEASEDVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKRALME 134
+ AS D KD ISHF+LRL YCR+EDLR+WFL+ ETAL+R+R E A M
Sbjct: 86 TLNEESASADKRKDTISHFILRLAYCRSEDLRRWFLTQETALFRHRL----EELSPAEMS 141
Query: 135 EFDLPCKAISRTEFENAKEKLEQVARSFDQPLPTADAI------FYKVPFEEVPELVAGR 188
+F +P + FE + + RS +P A + +Y++PF + +L+ R
Sbjct: 142 KF-IPEHGLF---FEVVTPERKAALRSKLLSIPAAPVMEFDRTTYYRIPFWQASDLIGKR 197
Query: 189 RVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEALSM 248
+VY+ G AYV + +VV++VV ++R +SK+L+ + + + R P+++ +S
Sbjct: 198 QVYLEGGFAYVPVQRVVTIVVARYRMGISKSLMEASNHFAYVTSD---SRFGPLLQNMSK 254
Query: 249 SYLGPDYSQTKEFGEISIKD--LDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFL 306
YLG D+ +IK L+ LA S PLCM+ L L +H LKH GR+Q GLFL
Sbjct: 255 QYLGRDFGNGDGTDPDNIKPGMLNSLAERSMPLCMKQLHSALNREHKLKHWGRLQYGLFL 314
Query: 307 KGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQKII-SS 365
KG GL ++DA+AFW+A F++ +G ++F K+YAY++RH YGKEGKRT+YTPYSC KII +
Sbjct: 315 KGAGLSVDDAMAFWQAMFTKIMGLDQFQKQYAYNVRHMYGKEGKRTNYTPYSCLKIIMGN 374
Query: 366 TPGVGDHHGCPYRHFSEENLRAALGRMGVGSRAMEDVVDKVRNRHYQLACTLTFEAVHSS 425
P GDHHGCPYRH+ E++L + L ++ +G+ + ++ +V++++YQLAC FEA H
Sbjct: 375 PPAAGDHHGCPYRHYDEDHLSSLLSQVRIGATDKDAILRQVKSKNYQLACQRHFEATHKG 434
Query: 426 ------SCDAGINHPNQYFSDSHKILQPKNNNAA 453
S D NHPN + S + + K A+
Sbjct: 435 YEASGVSTDGVGNHPNAWMHASMEFHKEKAAGAS 468
>gi|358331557|dbj|GAA50350.1| DNA primase large subunit [Clonorchis sinensis]
Length = 522
Score = 326 bits (836), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 190/451 (42%), Positives = 261/451 (57%), Gaps = 26/451 (5%)
Query: 21 LPLYRYAPQLEVRLEDFEVFAMDRLRVLKGI----SDALARGKRPEE--------MENLV 68
L LYR P + L + E +A+DR+RVLK + D GK EE +
Sbjct: 16 LQLYRDPPSETIELNELEQYAVDRIRVLKCVETARQDFKVSGKEYEERLTTELTKLGPFA 75
Query: 69 RDLWKANMRHPEASEDVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLL--GSS 126
+ L A ED+ +DIISHF+L++ YCR EDLR+WF+ E L+RYRFLL SS
Sbjct: 76 KSLTIPTGFSKTAKEDIRRDIISHFLLQVAYCRNEDLRRWFIQQEVELFRYRFLLERNSS 135
Query: 127 EAKRALMEEF--DLPCKAISRTEFENAKEKLEQVARSFDQPLPTADAIFYKVPFEEVPEL 184
+ ++ F + ++ E A+ + + VA + + + FYKV F EVPEL
Sbjct: 136 SSGPDVISHFLSENQLHFCHLSDRERARIQQQLVAGTAATGVDFSTTAFYKVYFSEVPEL 195
Query: 185 VAGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVE 244
V RR+YI G AYV +VSLVV+ FR+ LS +L S + +E R+ P++
Sbjct: 196 VRSRRIYIRAGFAYVPDSDLVSLVVSHFRTALSCSLARLGFTLGSCLASEEY-RVLPLLS 254
Query: 245 ALSMSYLGPDYS-QTKEFGEISIKDLDQLAR--SSFPLCMRHLFDKLREDHHLKHGGRMQ 301
+LS Y G DY+ + G I +D LAR FP CM L + L+ +HHL+H GRMQ
Sbjct: 255 SLSNRYFGEDYANKAPVMGHIKADQVDALARQHGVFPPCMAQLHETLKANHHLRHVGRMQ 314
Query: 302 LGLFLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQK 361
GLFLKG+GL +E++L FW+ F+ K ++F K YAY+IRHNYGKEGKRTDYTPYSC K
Sbjct: 315 YGLFLKGIGLPLEESLKFWRNAFAPKYDNDQFSKSYAYNIRHNYGKEGKRTDYTPYSCVK 374
Query: 362 IISST-PGVGDHHGCPYRHFSEENLRAALGRMG-VGSRAMEDVVDKVRNRHYQLACTLTF 419
IISS PG G+ HGCP+RH + LR L G + S A++ ++ + + R Y L+C F
Sbjct: 375 IISSNGPGPGESHGCPFRHMDPDLLRQRLSSRGRIPSDAVDTIMQRAKERLYHLSCREYF 434
Query: 420 EAVHSSSCDA----GINHPNQYFSDSHKILQ 446
A+H + DA I HPNQYF +S K+L+
Sbjct: 435 RAMHKLNADAISGLVITHPNQYFEESLKVLK 465
>gi|326427265|gb|EGD72835.1| DNA primase large subunit [Salpingoeca sp. ATCC 50818]
Length = 522
Score = 325 bits (832), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 181/443 (40%), Positives = 260/443 (58%), Gaps = 27/443 (6%)
Query: 21 LPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEEMENLVRDLWKANMRHPE 80
L Y PQ E+ LE+FE A+ RL LK A R P + + + KA +H
Sbjct: 35 LSFYLQPPQEEIGLEEFEELAVARLHALKACETAKVR--YPSRGSDFTQLISKAERKHLP 92
Query: 81 ASEDVNKDI---------ISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKRA 131
+E + DI +SHF+LRL YCRTEDLR+WFL+ ET L+R+R + +++
Sbjct: 93 VTESGDNDIRYDQRRRDYLSHFILRLAYCRTEDLRRWFLTQETELFRHRLMHQDTQSVNK 152
Query: 132 LMEEFDLPCKAISRTEFENAKEKLEQV-------ARSFDQPLPTADAIFYKVPFEEVPEL 184
L+ ++ KA+ + +L V S ++ L T ++VPFE+ +L
Sbjct: 153 LLALNNMQFKAVDAGVKQALAPELLAVHSITSNAGISLERMLSTD---VFEVPFEQALDL 209
Query: 185 VAGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVE 244
V RR + G+ YV ++ ++V FR+ LS +L T++ S +E DRL P+++
Sbjct: 210 VRSRRALVRNGNVYVTKDNLIPIIVAAFRARLSASLAHTSKALPSL---EEDDRLLPMLK 266
Query: 245 ALSMSYLGPDY-SQTKEFGEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLG 303
+LS + + S+T G+++ D+ LA+ SFPLCMR D L HHL+HG RMQ G
Sbjct: 267 SLSQQDISHGFKSKTATAGQVTPADIPTLAKESFPLCMRTTQDALHSTHHLRHGARMQYG 326
Query: 304 LFLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQKII 363
LFLKG+GL +EDALAFW++EF++ + E+F+K YAY+IRHNYGKEGKR +YTPYSC KII
Sbjct: 327 LFLKGIGLSLEDALAFWRSEFTKAMSHEKFEKSYAYNIRHNYGKEGKRQNYTPYSCMKII 386
Query: 364 -SSTPGVGDHHGCPYRHFSEENLRAALGRMGVGSRAMEDVVDKVRNRHYQLACTLTFEAV 422
S P GD HGCP++H++E+NL+ L V + + ++V VR H+QLAC FE
Sbjct: 387 MGSAPSTGDAHGCPFKHYNEQNLKTKLMAYKVPTATIHEIVQLVRGSHFQLACARYFEVT 446
Query: 423 HSS-SCDAGINHPNQYFSDSHKI 444
H S A + HPNQYF +S KI
Sbjct: 447 HEQPSGTATVTHPNQYFEESRKI 469
>gi|193591963|ref|XP_001947468.1| PREDICTED: DNA primase large subunit-like isoform 1 [Acyrthosiphon
pisum]
Length = 496
Score = 324 bits (830), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 169/442 (38%), Positives = 271/442 (61%), Gaps = 28/442 (6%)
Query: 21 LPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRP---EEMENLVRDLWKANMR 77
L LYR P + + L++FE +A++RL+VL+ + +G + +++V+++ K ++
Sbjct: 24 LQLYREIPDININLDEFEEWAIERLKVLQILEQLSLKGNTSNYEDFTKSVVQEIKKEGLK 83
Query: 78 HPEA------SEDVN-------KDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLG 124
H +D N +D+ SHF+LRL+YC++++LRKWF++ E L++ R+ L
Sbjct: 84 HMHKLINGGIYKDYNENCVARKRDLCSHFILRLIYCKSDELRKWFINREIELFKLRWTLL 143
Query: 125 SSEAKRALMEEFDLPCKAISRTEFENAKEKLEQVARSFDQPLPTADAIFYKVPFEEVPEL 184
S K + + A+S E + + + +A + + + ++KV + +V +L
Sbjct: 144 SKSDKLKFLSSNNTNYSAVSEEEHQIMVDSMGSLATAGN------NNEYFKVRWTQVLDL 197
Query: 185 VAGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVE 244
V R+VY+ G AYV V+S V FRS LS+ L+ +K+ S I E ER ++
Sbjct: 198 VRNRKVYLCDGFAYVIQTDVISGVCQTFRSELSQELVKCFQKF-SIISEDER--FGAFIK 254
Query: 245 ALSMSYLGPDYSQTKEFGEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGL 304
L SY+G +YS T+ +SI +D L+ SFPLCM+ L LR +HHLKH R Q GL
Sbjct: 255 YLHQSYMGKNYSVTENMSTLSINTIDHLSSKSFPLCMKRLHVVLRSEHHLKHQARQQYGL 314
Query: 305 FLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQKIIS 364
FLKG GL +E AL W++EF++K+ A++FDK+Y+Y+IRHNYGKEGK+ +YTPYSC KII
Sbjct: 315 FLKGAGLPLEQALVLWRSEFTKKMDADKFDKQYSYNIRHNYGKEGKKVNYTPYSCMKIIM 374
Query: 365 STPGVGDHHGCPYRHFSEENLRAALGRMGVGSRAMEDVVDKVRNRHYQLACTLTFEAVH- 423
G+ ++HGCPY+H + + L+ L + +++++++++ +N HYQ+ACT FEA +
Sbjct: 375 GAVGLDEYHGCPYKHTNSQALKQLLETSNISTQSIQEILNLSQNGHYQIACTKYFEAHNG 434
Query: 424 -SSSCDAGINHPNQYFSDSHKI 444
S SC A INHPNQ+F +S K+
Sbjct: 435 VSPSCTA-INHPNQFFEESQKL 455
>gi|443708510|gb|ELU03587.1| hypothetical protein CAPTEDRAFT_219114 [Capitella teleta]
Length = 513
Score = 322 bits (824), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 171/442 (38%), Positives = 267/442 (60%), Gaps = 20/442 (4%)
Query: 20 TLPLYRYAPQLEVRLEDFEVFAMDRLRVLK-----GISDALARGKRPEEMENLVRDL--- 71
L Y+ P +V L +FE A+ R++VLK GI + + E ME ++ L
Sbjct: 25 VLQFYKKPPSEDVTLHEFEDLAVQRVKVLKAVDSVGIRNIKGSKEYDEAMEKEIKKLRDV 84
Query: 72 -W---KANMRHPEASEDVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSE 127
W K +++ + S KD +SHF+LRL YC++++LR+WF+ E L+RYRFL +S
Sbjct: 85 DWFVEKTSIKPADLSARRRKDHLSHFILRLAYCKSDELRRWFIQQELDLFRYRFLRENSA 144
Query: 128 AKRALMEEFDLPCKAISRTEFENAKEKLEQVARSFDQPLPTADAIFYKVPFEEVPELVAG 187
+ +E+ L + I + ++KL+ + P +YKVPF EV ELV G
Sbjct: 145 SILDFLEKNGLDYQPIPHEDRGKMRDKLKDASFKMTSP-DVLQREYYKVPFMEVLELVRG 203
Query: 188 RRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEALS 247
R+VY+ G+AYV ++V +V+ FR +LS AL +T+R + +E RL +++ +
Sbjct: 204 RKVYLEGGYAYVPQDELVVIVLASFREHLSHALAITSRAVPAM---EEDGRLLKLLKNIH 260
Query: 248 MSYLGPDYSQTKEFGEISIKDL-DQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFL 306
YLG DYS K+ D+ + L++ SFP CM++L L+E+HHLKH GR+Q GLFL
Sbjct: 261 SLYLGNDYSTAKKANSAVTADMINGLSKQSFPPCMQNLHRGLKEEHHLKHWGRLQYGLFL 320
Query: 307 KGVGLRMEDALAFWKAEFSQ--KVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQKIIS 364
KG+GL +E+AL FWK+EF++ + E+FD++++Y+IR+NYGKEGKR DYTP+SC KII+
Sbjct: 321 KGIGLSLEEALRFWKSEFTKAADMDGEKFDRQHSYNIRYNYGKEGKRADYTPFSCIKIIT 380
Query: 365 ST-PGVGDHHGCPYRHFSEENLRAALGRMGVGSRAMEDVVDKVRNRHYQLACTLTFEAVH 423
+ PGVG +HGCP+RH + + + +M V++ ++ HYQLAC F+A H
Sbjct: 381 TNAPGVGHYHGCPFRHSDADLIEQKMNKMSFPKDKQTKVMEYIKGSHYQLACREYFKAAH 440
Query: 424 SSSCDAGINHPNQYFSDSHKIL 445
+ + + HPNQY+ +S +++
Sbjct: 441 KTEEEIDLMHPNQYYEESQRLI 462
>gi|357610399|gb|EHJ66963.1| DNA primase large subunit [Danaus plexippus]
Length = 497
Score = 321 bits (823), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 174/467 (37%), Positives = 280/467 (59%), Gaps = 32/467 (6%)
Query: 4 VRSQRSRTNTPNDSVSTLPL----YRYAPQLEVRLEDFEVFAMDRLRVLKGISDALA-RG 58
++ + ++T + T P+ Y+ P + L++FE A++RL +L+ ++ A +G
Sbjct: 5 IKRKTTKTIVTGSLIDTYPIDLQFYKIPPTENISLQEFETLALERLTLLRCLATATTLKG 64
Query: 59 KR---PEEMENLVRDLWKANMRHPE--------ASEDVN-----KDIISHFVLRLVYCRT 102
R E E ++ DL +++ +++V+ KD I+HF+LRL YCRT
Sbjct: 65 LRMYSEEWTEYVLSDLRSQGLKYYSKLCEKSGCGTQEVDLQARKKDHIAHFILRLAYCRT 124
Query: 103 EDLRKWFLSMETALYRYRFLLGSSEAKRALMEEFDLPCKAISRTEFENAKEKLEQVARS- 161
EDLR+WF++ E L++ RFL S+A + +L IS E KE + + S
Sbjct: 125 EDLRRWFVARELELFKMRFLTMKSDAIDTFFKLNNLSYTNISDDE---KKEIMPYLRDST 181
Query: 162 FDQPLPTADAI-FYKVPFEEVPELVAGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKAL 220
F Q ++ FYKV F EV +LV R+VY+ G+AY+ +S++ Q+R++L ++L
Sbjct: 182 FHQSNQNIESFKFYKVRFHEVLDLVKARKVYLRDGYAYIPHKDFISVLSAQYRTHLRQSL 241
Query: 221 ILTNRKWTSTIREQERD-RLTPIVEALSMSYLGPDYSQTKEFGEISIKDLDQLARSSFPL 279
+ R + E E+D RL +++ L SY G DY+ + I I+ ++ L+ SFP
Sbjct: 242 AIACRH----LGEIEQDERLVALLKGLHQSYAGNDYTSDIK-TTIPIESINSLSIKSFPF 296
Query: 280 CMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAY 339
CMR L ++LR HHLKHGGR+Q GLFLKG+G+ +ED+L FW+ EF++ + +++F+K+YAY
Sbjct: 297 CMRQLHEQLRSVHHLKHGGRLQYGLFLKGIGVTLEDSLRFWREEFTKIMESDKFEKQYAY 356
Query: 340 SIRHNYGKEGKRTDYTPYSCQKIISSTPGVGDHHGCPYRHFSEENLRAALGRMGVGSRAM 399
+IR+NYGKEG + +Y P +C KII++ G G+ HGCP+RH L+ L G+ +A
Sbjct: 357 NIRYNYGKEGSKKNYAPLNCLKIINTNVGPGECHGCPFRHSDLNVLKNKLKGYGLEGQAA 416
Query: 400 EDVVDKVRNRHYQLACTLTFEAVHSSSCDAGINHPNQYFSDSHKILQ 446
D+VD + HYQ+AC+ F+A+H++ GINHPNQYF +S K+++
Sbjct: 417 NDIVDMTKKGHYQIACSKYFDAIHNTDLGIGINHPNQYFEESQKLIK 463
>gi|325182015|emb|CCA16468.1| DNA primase putative [Albugo laibachii Nc14]
Length = 463
Score = 318 bits (815), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 188/464 (40%), Positives = 269/464 (57%), Gaps = 46/464 (9%)
Query: 15 NDSVSTLPLYRYAPQLEVRLEDFEVFAMDRLRVLK-------GISDALARGKRPEE--ME 65
N L +Y P +EV LE+FE FA++RLR LK G ++ +G+R E+ ++
Sbjct: 16 NGVTCMLSMYETPPIVEVTLEEFEQFAINRLRALKAVENFRLGSTNVKEKGERLEKVLLK 75
Query: 66 NL-VRDLWKANMRHPEASEDVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLG 124
NL +R N A ED+ +D++SH+ LR+ +C+TE+LR+WF+ E+ L+RYR
Sbjct: 76 NLPLRSAIPTN--SDRAQEDMLRDVLSHYFLRIAFCQTEELRRWFIQQESVLFRYRLDNM 133
Query: 125 SSEAKRALMEEFDLPCKAISRTEFENAKEKLEQVARSFD-------QPLPTADAIFYKVP 177
K M+E + +S +E E K+KL V S +PL + ++KV
Sbjct: 134 MRAEKLMFMKENGILFDEVSMSEIEKIKDKLTAVRDSCTLDRKERLRPLCS----YFKV- 188
Query: 178 FEEVPELVAGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWT-STIREQER 236
RRVYI G AYV QVVS++ T+FR++LSKAL RK+ STI R
Sbjct: 189 --------GARRVYIENGSAYVPFDQVVSILATRFRASLSKALAQAYRKYNRSTI---SR 237
Query: 237 D-RLTPIVEALSMSYLGPDY--SQTKEFG---EISIKDLDQLARSSFPLCMRHLFDKLRE 290
D RL PI+ L+ ++ DY + F +++ + LD L+R+S PLCMR+L L
Sbjct: 238 DGRLIPILNNLAKHHIDADYIGQSSTVFSSREKVTPETLDMLSRTSMPLCMRNLHKALLT 297
Query: 291 DHHLKHGGRMQLGLFLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGK 350
DHHL+ GR Q GLFLKG GL++EDA+AFW+ F +++ + F+K YAY+IRHNYGKEGK
Sbjct: 298 DHHLRFTGRQQYGLFLKGTGLQLEDAIAFWRQHFCKRMTVDEFNKTYAYNIRHNYGKEGK 357
Query: 351 RTDYTPYSCQKIISST-PGVGDHHGCPYRHFSEENLRAALGRMGVGSRAMEDVVDKVRNR 409
R DY PYSC II+ P G+HHGCPYRH ++ LR L GV ++++ V R
Sbjct: 358 RKDYVPYSCMSIITGNPPKSGEHHGCPYRHSEKDRLRKMLD--GVKEHEKDEIIRLVNGR 415
Query: 410 HYQLACTLTFEAVHSS-SCDAGINHPNQYFSDSHKILQPKNNNA 452
H+Q+AC FE H + D +NHPN+YF +S + + N+A
Sbjct: 416 HFQVACKKYFELQHPEYNGDLAVNHPNKYFEESRRYHTERTNSA 459
>gi|328710184|ref|XP_003244189.1| PREDICTED: DNA primase large subunit-like isoform 2 [Acyrthosiphon
pisum]
gi|328710186|ref|XP_001948517.2| PREDICTED: DNA primase large subunit-like isoform 1 [Acyrthosiphon
pisum]
Length = 469
Score = 318 bits (815), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 167/442 (37%), Positives = 270/442 (61%), Gaps = 29/442 (6%)
Query: 21 LPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRP---EEMENLVRDLWKANMR 77
L LYR P + + L++FE +A++RL+VL+ + +G + +++V+++ K ++
Sbjct: 24 LQLYREIPDININLDEFEEWAIERLKVLQILEQLSLKGNTSNYEDFTKSVVQEIKKEGLK 83
Query: 78 H-------------PEASEDVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLG 124
H E + +D+ SHF+LRL+YC++++LRKWF++ E L++ R+ L
Sbjct: 84 HMHKLINGGIYKDYNENCDARKRDLCSHFILRLIYCKSDELRKWFINREIELFKLRWTLL 143
Query: 125 SSEAKRALMEEFDLPCKAISRTEFENAKEKLEQVARSFDQPLPTADAIFYKVPFEEVPEL 184
S K + + A+S E + + + +A + + + ++KV + +V +L
Sbjct: 144 SKSDKLKFLSSNNTNYSAVSEEEHQIMVDSMGSLATAGN------NNEYFKVRWTQVLDL 197
Query: 185 VAGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVE 244
V R+VY+ G AYV V+S V FRS LS+ L+ +K+ S I E ER ++
Sbjct: 198 VRNRKVYLCDGFAYVIQTDVISGVCQTFRSELSQELVKCFQKF-SIISEDER--FGAFIK 254
Query: 245 ALSMSYLGPDYSQTKEFGEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGL 304
L SY+G +YS T+ +SI +D ++S FPLCM+ L LR +HHLKH R Q GL
Sbjct: 255 YLHQSYMGKNYSVTENMSTLSINTIDHSSKS-FPLCMKRLHVVLRSEHHLKHQARQQYGL 313
Query: 305 FLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQKIIS 364
FLKG GL +E AL W++EF++K+ A++FDK+Y+Y+IRHNYGKEGK+ +YTPYSC KII
Sbjct: 314 FLKGAGLPLEQALVLWRSEFTKKMDADKFDKQYSYNIRHNYGKEGKKVNYTPYSCMKIIM 373
Query: 365 STPGVGDHHGCPYRHFSEENLRAALGRMGVGSRAMEDVVDKVRNRHYQLACTLTFEAVH- 423
G+ ++HGCPY+H + + L+ L + +++++++++ +N HYQ+ACT FEA +
Sbjct: 374 GAVGLDEYHGCPYKHTNSQALKQLLETSNISTQSIQEILNLSQNGHYQIACTKYFEAHNG 433
Query: 424 -SSSCDAGINHPNQYFSDSHKI 444
S SC A INHPNQ+F +S K+
Sbjct: 434 VSPSCTA-INHPNQFFEESQKL 454
>gi|328710176|ref|XP_003244186.1| PREDICTED: DNA primase large subunit-like isoform 2 [Acyrthosiphon
pisum]
gi|328710179|ref|XP_003244187.1| PREDICTED: DNA primase large subunit-like isoform 3 [Acyrthosiphon
pisum]
Length = 495
Score = 318 bits (815), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 168/442 (38%), Positives = 271/442 (61%), Gaps = 29/442 (6%)
Query: 21 LPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRP---EEMENLVRDLWKANMR 77
L LYR P + + L++FE +A++RL+VL+ + +G + +++V+++ K ++
Sbjct: 24 LQLYREIPDININLDEFEEWAIERLKVLQILEQLSLKGNTSNYEDFTKSVVQEIKKEGLK 83
Query: 78 HPEA------SEDVN-------KDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLG 124
H +D N +D+ SHF+LRL+YC++++LRKWF++ E L++ R+ L
Sbjct: 84 HMHKLINGGIYKDYNENCVARKRDLCSHFILRLIYCKSDELRKWFINREIELFKLRWTLL 143
Query: 125 SSEAKRALMEEFDLPCKAISRTEFENAKEKLEQVARSFDQPLPTADAIFYKVPFEEVPEL 184
S K + + A+S E + + + +A + + + ++KV + +V +L
Sbjct: 144 SKSDKLKFLSSNNTNYSAVSEEEHQIMVDSMGSLATAGN------NNEYFKVRWTQVLDL 197
Query: 185 VAGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVE 244
V R+VY+ G AYV V+S V FRS LS+ L+ +K+ S I E ER ++
Sbjct: 198 VRNRKVYLCDGFAYVIQTDVISGVCQTFRSELSQELVKCFQKF-SIISEDER--FGAFIK 254
Query: 245 ALSMSYLGPDYSQTKEFGEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGL 304
L SY+G +YS T+ +SI +D ++S FPLCM+ L LR +HHLKH R Q GL
Sbjct: 255 YLHQSYMGKNYSVTENMSTLSINTIDHSSKS-FPLCMKRLHVVLRSEHHLKHQARQQYGL 313
Query: 305 FLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQKIIS 364
FLKG GL +E AL W++EF++K+ A++FDK+Y+Y+IRHNYGKEGK+ +YTPYSC KII
Sbjct: 314 FLKGAGLPLEQALVLWRSEFTKKMDADKFDKQYSYNIRHNYGKEGKKVNYTPYSCMKIIM 373
Query: 365 STPGVGDHHGCPYRHFSEENLRAALGRMGVGSRAMEDVVDKVRNRHYQLACTLTFEAVH- 423
G+ ++HGCPY+H + + L+ L + +++++++++ +N HYQ+ACT FEA +
Sbjct: 374 GAVGLDEYHGCPYKHTNSQALKQLLETSNISTQSIQEILNLSQNGHYQIACTKYFEAHNG 433
Query: 424 -SSSCDAGINHPNQYFSDSHKI 444
S SC A INHPNQ+F +S K+
Sbjct: 434 VSPSCTA-INHPNQFFEESQKL 454
>gi|213406121|ref|XP_002173832.1| DNA primase large subunit [Schizosaccharomyces japonicus yFS275]
gi|212001879|gb|EEB07539.1| DNA primase large subunit [Schizosaccharomyces japonicus yFS275]
Length = 469
Score = 316 bits (809), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 185/467 (39%), Positives = 264/467 (56%), Gaps = 41/467 (8%)
Query: 3 IVRSQRSRTNTPNDSVSTLPL-----------YRYAPQLEVRLEDFEVFAMDRLRVLKGI 51
+ RS R+R+ +TL L Y P E+ LE+FE +A+DRL VL I
Sbjct: 1 MYRSSRTRSQNSGKKATTLSLGTAEYPTRLNFYLDPPTGEISLEEFETWALDRLYVLSEI 60
Query: 52 SDALARGKRPEEMENLVRDL------WKANMRHPEASEDVN----KDIISHFVLRLVYCR 101
+A+ R K +E + L+R + +NM V+ KD SHF+LRL +CR
Sbjct: 61 ENAIFRNKTRKEFDLLLRKVLDKHLPMSSNMARSVKGAQVDAERCKDHYSHFILRLAFCR 120
Query: 102 TEDLRKWFLSMETALYRYRFLLGSSEAKRALMEEFDLPCKAISRTEFENAKEKLEQVA-R 160
+E+LR+ F+ +E+ L+R+RF+ + +++ ++ + +S E + +KL R
Sbjct: 121 SEELRRRFVRLESILFRFRFMQEEARERQSFVDRLHFQWELVSEEEKKLLHDKLTNACQR 180
Query: 161 SFDQPLPTADAIFYKVPFEEVPELVAGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKAL 220
+ D F+KV F VP+LV R VYI +G+AYV + VSLVV F L A+
Sbjct: 181 NIDSD------TFFKVDFIRVPDLVERRSVYISRGNAYVPFSEQVSLVVDDFEQKLLMAM 234
Query: 221 ILTNRKWTSTIREQERDRLTPIVEALSMSYLGPDY---SQTKEFGEISIKDLDQLARSSF 277
T + R E DRL PI++ L ++ P+Y S +K+ GE D+D L R F
Sbjct: 235 EKTAKILP---RLDEDDRLVPILDNLGKGFIAPEYNSQSVSKKAGEFGADDIDGLVRY-F 290
Query: 278 PLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWKAEFSQKVGAERFDKEY 337
PLC +HL LR D HL+H GR+Q GLFLK +GL ME+AL FW+ FS + ERF KEY
Sbjct: 291 PLCAQHLHHSLRRDKHLRHFGRLQYGLFLKEMGLSMEEALIFWRKSFSN-ISDERFSKEY 349
Query: 338 AYSIRHNYGKEGKRTDYTPYSCQKIISS-TPGVGDHHGCPYRHFSEENLRAALGRMGVGS 396
Y++RH YG+EG R DY +SCQ+I++ PG GD HGCPYR FS ENL A+ +G+
Sbjct: 350 RYNVRHQYGQEGNRRDYKAFSCQQILTGPQPGPGDAHGCPYRTFSVENLTQAISSLGITP 409
Query: 397 RAME--DVVDKVRNRHYQLACTLTFEAVHSS--SCDAGINHPNQYFS 439
+ + +++D VRNRHY +ACT E H + + INHPNQYF+
Sbjct: 410 DSADGREILDAVRNRHYHIACTRVLELSHPAVGTLSETINHPNQYFN 456
>gi|67078420|ref|NP_001019933.1| DNA primase large subunit [Rattus norvegicus]
gi|66911072|gb|AAH97454.1| Primase, DNA, polypeptide 2 [Rattus norvegicus]
Length = 484
Score = 313 bits (801), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 172/434 (39%), Positives = 255/434 (58%), Gaps = 34/434 (7%)
Query: 20 TLPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISD-ALARGKRPEEMEN-LVRDLWKANMR 77
+L Y P + L +FE A DR+++LK I + ++ K E+ ++ L ++ K
Sbjct: 25 SLQFYLQPPTENISLTEFESLAFDRVKLLKAIENLGVSYVKGTEQYQSKLEAEIRKLKFS 84
Query: 78 HPEASEDV----NKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKRALM 133
+ E ED +D ISHF+LRL YC++EDLR+WF+ E L R+RF + + ++ +
Sbjct: 85 YRENLEDEYEPRRRDHISHFILRLAYCQSEDLRRWFIQQEMDLLRFRFSILPKDKVQSFL 144
Query: 134 EEFDLPCKAISRTEFENAKEKLEQVARSFDQPLPTADAIFYKVPFEEVPELVAGRRVYIH 193
++ L +AIS E ++ + + S ++++ YKVPF + +L GR+VY+
Sbjct: 145 KDTHLHFEAISDEEKTLREQDIMASSPSLSGVRWESESV-YKVPFADALDLFRGRKVYLE 203
Query: 194 KGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEALSMSYLGP 253
G AYV + +V++++ +FR+ LSKAL LT R + Q +RL P++ LS SY G
Sbjct: 204 DGFAYVPLKDIVAIILNEFRATLSKALALTARSLPAV---QSDERLQPLLSHLSHSYTGQ 260
Query: 254 DYSQTKEFGEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRM 313
DYS K G+IS+ +D L+ SFP CMR L LRE+HHL+HGGRMQ GLFLKG+GL +
Sbjct: 261 DYSTQKSTGKISLDQIDSLSTKSFPPCMRQLHKALRENHHLRHGGRMQYGLFLKGIGLTL 320
Query: 314 EDALAFWKAEFSQ-KVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQKII-SSTPGVGD 371
E AL FWK EF + K+ ++FDK Y+Y+IRH++GKEGKRTDYTP+SC KII ++ P GD
Sbjct: 321 EQALQFWKQEFIKGKMDPDKFDKGYSYNIRHSFGKEGKRTDYTPFSCMKIILTNPPSQGD 380
Query: 372 HHGCPYRHFSEENLRAALGRMGVGSRAMEDVVDKVRNRHYQLACTLTFEAVHSSSCDAGI 431
HGCP+RH E L+ + + + + V D C +
Sbjct: 381 FHGCPFRHSDAELLKQKMQTYKIPASGISQVDD----------------------CGFSL 418
Query: 432 NHPNQYFSDSHKIL 445
NHPNQ+F +S +IL
Sbjct: 419 NHPNQFFFESQRIL 432
>gi|353241989|emb|CCA73765.1| related to PRI2-DNA-directed DNA polymerase alpha , 58 KD subunit
(DNA primase) [Piriformospora indica DSM 11827]
Length = 488
Score = 311 bits (798), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 180/457 (39%), Positives = 264/457 (57%), Gaps = 35/457 (7%)
Query: 21 LPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEEMENLVRDLWKANMR--- 77
L Y PQ +V LE FE + +DRLR+L I + R + EE++ +V K +
Sbjct: 36 LNFYDTPPQFDVTLEQFESWGLDRLRILAEIESSFVRNRAFEELKGIVNTQQKKYLTLNS 95
Query: 78 ----HPEASEDVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKRALM 133
+ + + KD +SHFVLRL +CR+EDLR+ F+ E AL++ R+ + +
Sbjct: 96 NTAINADKDAERKKDHVSHFVLRLAFCRSEDLRRRFIKAEMALFKVRWETDDPKER---- 151
Query: 134 EEFDLPCKAISRTEFENA-KEKLEQVARSFDQP-----LPTADAIFYKVPFEEVPELVAG 187
EEF L +A + +A K +LE ++ P P +YKVP+ VP+LV G
Sbjct: 152 EEF-LKARAFGWGDVSDAEKAELEPHLKACLNPKQLQYFPQEK--YYKVPWSRVPDLVHG 208
Query: 188 RRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEALS 247
RRVY+ G AYV + S+V QF+++L +A+ +T R + + DRLTPI++ LS
Sbjct: 209 RRVYLRAGAAYVPSREQSSIVFQQFQADLEEAMEMTAR----ALPRMDEDRLTPILDHLS 264
Query: 248 MSYLG---PDYSQTKEFGEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGL 304
+L +YS + ++ +D LA+ FPLCMR L + LR++ HL+H GR+Q GL
Sbjct: 265 KGFLAGVASEYSAPESGESVTADMIDGLAKKHFPLCMRALHEHLRKESHLRHQGRLQYGL 324
Query: 305 FLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQKIIS 364
FLK VGL +E+ALAFW+ FS K+ E+F KE+ Y+I+HNYG GK +Y SCQ I++
Sbjct: 325 FLKIVGLSIEEALAFWRKAFSGKMSDEKFTKEHLYNIKHNYGLVGKMANYPARSCQTILT 384
Query: 365 S-TPGVGDHHGCPYRHFSEENLRAAL-GRMGVGSRAMEDVVDKVRNRHYQLACTLTFEAV 422
+ PG + HGCPYRH+SE+NL+ AL MG+ S M+DV+ VR +HY +ACT +E
Sbjct: 385 TYPPGANEFHGCPYRHYSEDNLKTALQSMMGISSHDMQDVLSSVRTQHYHVACTRVYELT 444
Query: 423 HSSSCDAG------INHPNQYFSDSHKILQPKNNNAA 453
H G +NHPN+Y S ++ + KN AA
Sbjct: 445 HGIRKGEGLGGGETVNHPNEYCQRSRELEKSKNAAAA 481
>gi|384499610|gb|EIE90101.1| hypothetical protein RO3G_14812 [Rhizopus delemar RA 99-880]
Length = 1012
Score = 309 bits (791), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 176/449 (39%), Positives = 262/449 (58%), Gaps = 47/449 (10%)
Query: 12 NTPNDSVSTLPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEEMENLVRDL 71
N +D L Y P ++ +E+FE FA+DRL+ + + + +A K+ E
Sbjct: 578 NLQSDYPFRLNFYLKPPPADITIEEFEEFALDRLQAI--LQEQIAFMKKKE--------- 626
Query: 72 WKANMRHPEASEDVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKRA 131
D ISHFVLR+ YCR+EDLR WF+ ET L+++RF E K+A
Sbjct: 627 ----------------DHISHFVLRMAYCRSEDLRDWFVRQETTLFKFRFEQEPMEEKKA 670
Query: 132 LMEEFDLPCKAISRTEFENAKEKLEQVARSF---DQPLPTADAI--------FYKVPFEE 180
+++ +L K +S E EN +E+LE ++ PT I F++V FE+
Sbjct: 671 FLQKLNLNWKMLSEEEKENIREELEICCQALLRSKSDNPTLAMIEQFVNMETFFEVDFEK 730
Query: 181 VPELVAGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLT 240
VP LV R VY+ +G AYV M + V++V+ +++ L K+L T + R +E DRL
Sbjct: 731 VPNLVGNRLVYLRQGKAYVPMSEQVNIVMNEYQDYLYKSLESTAKLLP---RIEEDDRLK 787
Query: 241 PIVEALSMSYLGPDY--SQTKEFGEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGG 298
PI+ + Y+G Y + G ++ ++D L + PLCMRHL D LR + HL+H G
Sbjct: 788 PILLNVEKQYVGKSYNSADVDYSGSVTANEVDTLVKRHAPLCMRHLHDGLRTNKHLRHEG 847
Query: 299 RMQLGLFLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTDYTPYS 358
R+Q GLFLKG+GL +E+AL FW+ FS + ++F K YAY++R+NYG EG+R +Y PYS
Sbjct: 848 RLQYGLFLKGIGLSVEEALVFWRRAFSD-ITDDKFQKNYAYNVRYNYGLEGRRVNYNPYS 906
Query: 359 CQKIISST-PGVGDHHGCPYRHFSEENLRAALGRMGVGSRAMEDVVDKVRNRHYQLACTL 417
C KIIS T PG G++HGCP+RH S+++L A L + + +++++D VR++HYQLACT
Sbjct: 907 CTKIISGTAPGTGEYHGCPFRHGSDKSLEAKLFKDQISRSHIDEILDLVRSKHYQLACTR 966
Query: 418 TFEAVHSSSCDA--GINHPNQYFSDSHKI 444
FEA H + + I HPNQY+ S K+
Sbjct: 967 YFEATHLENKEKIDPIEHPNQYYELSKKL 995
>gi|256085647|ref|XP_002579026.1| DNA primase large subunit [Schistosoma mansoni]
gi|238664428|emb|CAZ35265.1| DNA primase large subunit, putative [Schistosoma mansoni]
Length = 515
Score = 307 bits (786), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 184/464 (39%), Positives = 263/464 (56%), Gaps = 38/464 (8%)
Query: 21 LPLYRYAPQLEVRLEDFEVFAMDRLRVLK---GISDALARGKRPEEMENLVRDLWKAN-- 75
L Y P + L + E +A+ R+RVLK + RG + + + ++ +L K +
Sbjct: 16 LQFYNCPPSDIIELNELEDYAVHRIRVLKCVEAVGQDYIRGTKDYD-DKMITELTKISGF 74
Query: 76 ---MRHPEAS-----EDVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFL----- 122
P +S ED++KDI+SHF+L++ YCR+EDLR+WF+ E L+R+RFL
Sbjct: 75 GKIFTSPSSSLKNAKEDIHKDIVSHFILQVAYCRSEDLRRWFVQQEVDLFRFRFLNERNN 134
Query: 123 --LGSSEAKRALMEEFDLPCKAISRTEFENAKEKLEQVARSFDQPLPTADAIFYKVPFEE 180
GS R L E L +S +E N L +A + + FYKV F E
Sbjct: 135 STFGSEVISRFLYEN-HLHFTLMSDSERTNLLNYL--IAGTATVGIDHNTTAFYKVHFTE 191
Query: 181 VPELVAGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLT 240
VP+L+ RRV++ G+A+V +VSLVV+ FR++LS+ L S +E +R+
Sbjct: 192 VPDLIRSRRVFVQGGYAFVPEPDLVSLVVSCFRTSLSRNLAHLGLTLCSRTVCEE-NRVL 250
Query: 241 PIVEALSMSYLGPDYS-QTKEFGEISIKDLDQLARSS--FPLCMRHLFDKLREDHHLKHG 297
P++ +LS YLG DYS + G + D++ +R FP CM L + L+ HHL+H
Sbjct: 251 PLLSSLSNRYLGEDYSIKAPVTGLVKADDIEGFSRQPGLFPPCMAQLHEALKVHHHLRHS 310
Query: 298 GRMQLGLFLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTDYTPY 357
GRMQ GLFLKG+GL +E++L FW+ FS K ++F K YAY+IRHNYGKEGKR DYTPY
Sbjct: 311 GRMQYGLFLKGIGLPLEESLKFWRKVFSPKCDNDQFHKAYAYNIRHNYGKEGKRADYTPY 370
Query: 358 SCQKIIS-STPGVGDHHGCPYRHFSEENLRAAL---GRMGVGSRAMEDVVDKVRNRHYQL 413
SC +I+S S PG GD+HGCP+RH E LR L GR+ + +E +V + + R Y L
Sbjct: 371 SCIRIVSGSAPGAGDYHGCPFRHMDPELLRQRLLSGGRLSLD--VVETIVLRAKERLYHL 428
Query: 414 ACTLTFEAVHSSSCD----AGINHPNQYFSDSHKILQPKNNNAA 453
+C + S D I+HPNQYF ++ KILQ NN+
Sbjct: 429 SCREYLRGMLKLSVDDISGVTIHHPNQYFEEARKILQGNKNNST 472
>gi|19113172|ref|NP_596380.1| DNA primase large subunit Spp2 [Schizosaccharomyces pombe 972h-]
gi|34395750|sp|O74761.1|PRI2_SCHPO RecName: Full=DNA primase large subunit
gi|3650405|emb|CAA21077.1| DNA primase large subunit Spp2 [Schizosaccharomyces pombe]
Length = 459
Score = 305 bits (782), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 178/465 (38%), Positives = 267/465 (57%), Gaps = 41/465 (8%)
Query: 3 IVRSQRSRTNTPNDSVST-----------LPLYRYAPQLEVRLEDFEVFAMDRLRVLKGI 51
+ R+ +SR N + S+ L Y+ P E+ +E+FE +A+DRL VL I
Sbjct: 1 MFRTTKSRVVEKNQNFSSASFESLSYPTRLNFYKKPPVSEISIEEFETWAIDRLVVLGEI 60
Query: 52 SDALARGKRPEEMENLVRDLWKANMRHPEAS------------EDVNKDIISHFVLRLVY 99
A+ R K E+ +++ + + R P +S E+ KD SHF+LRL +
Sbjct: 61 ESAMLRNKTKNELNGIIKKIL--DKRLPMSSNMARTVKGNSLDEERRKDHYSHFILRLAF 118
Query: 100 CRTEDLRKWFLSMETALYRYRFLLGSSEAKRALMEEFDLPCKAISRTEFENAKEKLEQVA 159
R+++LR FL E+ L+R+RF+ + ++A ++ D +++S+ E + EKL+ +
Sbjct: 119 SRSDELRIRFLRAESTLFRFRFVNEETRERQAFIDSLDFQWESVSQEEKDVFYEKLQASS 178
Query: 160 RSFDQPLPTADAIFYKVPFEEVPELVAGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKA 219
+ + F+KVPF +VP+LV R V++HKG+AYV + VSLVV +F NL KA
Sbjct: 179 QR-----NIENESFFKVPFFKVPDLVERRAVFVHKGYAYVPFSEQVSLVVEEFEENLKKA 233
Query: 220 LILTNRKWTSTIREQERDRLTPIVEALSMSYLGPDYSQTK-EFGEISIKDLDQLARSSFP 278
L T + S R E DRL PI+ LS ++ P+ S + G I+ +D S FP
Sbjct: 234 LESTAK---SLPRLDEDDRLLPILNHLSKGFVAPESSIVAPKSGAITAGQVDSFV-SHFP 289
Query: 279 LCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYA 338
LC +HL + L+ D HL+H GR+Q GLFLK +GL +++AL FW+ F+ V ++F+KEY
Sbjct: 290 LCAKHLHEVLKRDKHLRHFGRLQYGLFLKDIGLSVDEALVFWRKSFTN-VTEDKFNKEYR 348
Query: 339 YSIRHNYGKEGKRTDYTPYSCQKIISSTP-GVGDHHGCPYRHFSEENLRAALGRMGVG-- 395
Y+IRH YG EG R +Y Y+CQ+I++ G GD HGCPYR +S NL +AL MG+
Sbjct: 349 YNIRHTYGLEGNRKNYKGYNCQQILTGPQLGPGDAHGCPYRTYSVNNLVSALASMGIAPD 408
Query: 396 SRAMEDVVDKVRNRHYQLACTLTFEAVHSS--SCDAGINHPNQYF 438
S +VV+ V+ RHY +ACT FE H + S + I+HP QYF
Sbjct: 409 SAGCREVVEAVKARHYHIACTRVFELTHPNVGSLEESIHHPLQYF 453
>gi|340380484|ref|XP_003388752.1| PREDICTED: DNA primase large subunit-like [Amphimedon
queenslandica]
Length = 500
Score = 305 bits (782), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 178/472 (37%), Positives = 270/472 (57%), Gaps = 27/472 (5%)
Query: 1 MEIVRSQRSRTNTPNDSV--STLPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARG 58
MEI R+ R P + S L LY P ++ L++ A R +VL+ +S+ R
Sbjct: 1 MEIDRNYRVVKEHPLSKLYPSHLQLYTIPPNQDISLDELYEVAFTRQKVLQEVSNIRERS 60
Query: 59 KRPE----EMENLVRDLWKANMRHPEASEDVN--------KDIISHFVLRLVYCRTEDLR 106
KR + E +L+ K +P E + +D ISH++LRL YC EDLR
Sbjct: 61 KRGDVPDAEFHSLMGQKTKPITLNPALGEKIKDKHINERRRDHISHYILRLAYCEREDLR 120
Query: 107 KWFLSMETALYRYRFLLGSSEAKRALMEEFD--LPCKAISRTEFENAKEKLEQVA-RSFD 163
+WFLS E AL YR + + + ++++ P ++ E+ E ++ ++
Sbjct: 121 RWFLSQEVALLNYRLHDATPDDFQGFIKQYREYFPFTEGKFSDLEDKSLCNEMLSFYNYK 180
Query: 164 QPLPTADAIFYKVPFEEVPELVAGRRVYIHKGHAYVAMHQ---VVSLVVTQFRSNLSKAL 220
Q A +Y V F EV +LV R V IHKG AY+ M++ +++L+ +FRS LS+ L
Sbjct: 181 QKPTQASNEYYSVHFSEVFDLVQNRSVIIHKGFAYLPMNRTDMIITLICNKFRSLLSQDL 240
Query: 221 ILTNRKWTSTIREQERDRLTPIVEALSMSYLGPDY--SQTKEFGEISIKDLDQLARSSFP 278
+ T + S I+E ER R T + L +YLG D+ S K G+I + DLD L++ SF
Sbjct: 241 VRT-VAFMSFIKEDERMRKT--ITTLRNNYLGSDFVNSGMKTSGQIRLSDLDSLSKESFS 297
Query: 279 LCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYA 338
CMR+L + LR++HHL+H GR+Q GLFLK +G+ +E AL FW++EF++ + ++FDK+YA
Sbjct: 298 PCMRNLHESLRKEHHLRHFGRLQYGLFLKSIGITLEQALEFWRSEFTKIMEPDKFDKQYA 357
Query: 339 YSIRHNYGKEGKRTDYTPYSCQKII-SSTPGVGDHHGCPYRHFSEENLRAALGRMGVGSR 397
Y++RH+YGKEGKRT+YTPYSC KII S+ P GDHHGCP++H+ +++ L GV
Sbjct: 358 YNVRHSYGKEGKRTNYTPYSCMKIIMSNGPSSGDHHGCPFKHWDGDSISKMLVSYGVPMS 417
Query: 398 AMEDVVDKVRNRHYQLACTLTFEAVHS-SSCDAGINHPNQYFSDSHKILQPK 448
+ ++ + HYQLAC FE H+ + + HP QYF +S + + K
Sbjct: 418 QVTSILSYAHDSHYQLACQKYFEVTHNLQQSNFSLEHPTQYFIESRNVREGK 469
>gi|194749661|ref|XP_001957257.1| GF24146 [Drosophila ananassae]
gi|190624539|gb|EDV40063.1| GF24146 [Drosophila ananassae]
Length = 532
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 167/459 (36%), Positives = 258/459 (56%), Gaps = 35/459 (7%)
Query: 19 STLPLYRYAPQLEVRLEDFEVF--------------AMDRLRVLKG-----ISDALARGK 59
S + LY Y P ++ +E+FE + LR+L + L R
Sbjct: 26 SNVMLYHYPPTDDIHIEEFEELALERLRLLRILERASTKNLRMLSDEWKEYVGAELTR-- 83
Query: 60 RPEEMENLVRDLWKANMRHPEASEDVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRY 119
E + + +R A +H + +D ISHF+LRL YCR+E+L +WF++ E L+RY
Sbjct: 84 --EGLRSYLRLCSPAGGKHDSDIQTRRRDYISHFILRLAYCRSEELTRWFVAREMELFRY 141
Query: 120 RFLLGSSEAKRALMEEFDLPCKAISRTEFENAKEKL-EQVARSFDQPLPTADAIFYKVPF 178
+F SS + +++ + ++ + + K+ L E A + D FYKVPF
Sbjct: 142 KFSALSSSEVKQFLDDNNFDIHPLTEAQKDEVKDGLYESTAGQSVAKIELLD--FYKVPF 199
Query: 179 EEVPELVAGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERD- 237
+V +LV GRR Y+ G AYV H +VS+V T+ + + + L+ N + E E D
Sbjct: 200 TQVLDLVRGRRCYLKAGFAYVNTHDLVSIVGTRQQEEIEQGLVAAN----GLVEEVEGDE 255
Query: 238 RLTPIVEALSMSYLGPDYSQTKEFGEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHG 297
R++ +++AL SY G DY+ ++ + I+ LDQL+++S PLCMR + +R HH+KHG
Sbjct: 256 RISRMLKALHNSYTGKDYTVCRD-AAVPIESLDQLSKTSMPLCMRMCHEHIRAQHHVKHG 314
Query: 298 GRMQLGLFLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTDYTPY 357
GRMQ GLFLKG+G+ +ED+L FW+ EF++K+ A++F + Y Y+I HNYGK+G +YTPY
Sbjct: 315 GRMQYGLFLKGIGVTLEDSLRFWREEFTKKMDADKFARSYEYNIYHNYGKKGSMVNYTPY 374
Query: 358 SCQKIISSTPGVGDHHGCPYRHFSEENLRAALGRMGVGSRAMEDVVDKVRNRHYQLACTL 417
SC KII GD HGCPY+ +L++ L G+ A+++V+ V HYQ+ C
Sbjct: 375 SCAKIIKDMAAPGDCHGCPYKSMDPSSLKSKLTSYGLSPSAIDEVMYFVSRGHYQIGCGK 434
Query: 418 TFEAVHSSSCDAGINHPNQYFSDSHKIL---QPKNNNAA 453
F+ H+SS + INHPN YF +S ++ Q + N A
Sbjct: 435 YFQLTHNSSVEPTINHPNNYFEESQILMGNRQKRTNGPA 473
>gi|194874810|ref|XP_001973471.1| GG13326 [Drosophila erecta]
gi|190655254|gb|EDV52497.1| GG13326 [Drosophila erecta]
Length = 532
Score = 301 bits (772), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 172/452 (38%), Positives = 262/452 (57%), Gaps = 28/452 (6%)
Query: 23 LYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKR---PEEMENLVRDLWKANMR-- 77
LY Y P +V +++FE A++RLR+L+ + A R +R E EN+ DL + +R
Sbjct: 30 LYHYPPTEDVHIDEFEELALERLRLLRVLDRASNRNQRLLSDEWKENVSADLTREGLRSY 89
Query: 78 -----------HPEASEDVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSS 126
H + +D +SHF+LRL YCR+EDL +WF++ E L+RY+F SS
Sbjct: 90 LRLCSAGGSTKHEADIQTRRRDYLSHFILRLAYCRSEDLARWFVAREMELFRYKFAALSS 149
Query: 127 EAKRALMEEFDLPCKAISRTEFENAKEKL-EQVARSFDQPLPTADAIFYKVPFEEVPELV 185
+ +E +S + + K+ L E A + D FYKVPF +V +LV
Sbjct: 150 AEVKQFLEANGFEIHPLSEAQKDEVKDGLYESTAGQSVAKIELLD--FYKVPFTQVLDLV 207
Query: 186 AGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERD-RLTPIVE 244
GRR Y+ G AYV H +VSLV T+ + + + L + + + + E D R++ ++
Sbjct: 208 RGRRCYLKAGFAYVNTHDLVSLVGTKQQDEIEQGL----QAAKTMVDDVEADERISRTLK 263
Query: 245 ALSMSYLGPDYSQTKEFGEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGL 304
AL SY G DY+ ++ I I+ LDQL+++S PLCMR + +R HH+KH GRMQ GL
Sbjct: 264 ALHNSYTGRDYTVCRD-AAIPIESLDQLSKTSMPLCMRMCHEHIRAQHHIKHNGRMQYGL 322
Query: 305 FLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQKIIS 364
F+KG+G+ +ED+L FW+ EF++K+ A++F + Y Y+I HNYGK+G +YTPYSC KII
Sbjct: 323 FIKGIGVTLEDSLRFWREEFTKKMDADKFARSYEYNIYHNYGKKGSMVNYTPYSCAKIIK 382
Query: 365 STPGVGDHHGCPYRHFSEENLRAALGRMGVGSRAMEDVVDKVRNRHYQLACTLTFEAVHS 424
G GD HGCPY++ + +L+ L G+ + A+++V+ V HYQ+AC F+ H+
Sbjct: 383 DATGPGDCHGCPYKYMDQGSLKTKLSSYGLSASAVDEVMSFVSRGHYQIACGKYFQITHN 442
Query: 425 SSCDAGINHPNQYFSDSHKIL---QPKNNNAA 453
S+ + I HPN YF +S + Q + N A
Sbjct: 443 STVEPTIIHPNNYFEESQITMGNRQKRTNGPA 474
>gi|195479930|ref|XP_002086618.1| GE22752 [Drosophila yakuba]
gi|195495929|ref|XP_002095476.1| GE22414 [Drosophila yakuba]
gi|194181577|gb|EDW95188.1| GE22414 [Drosophila yakuba]
gi|194186408|gb|EDX00020.1| GE22752 [Drosophila yakuba]
Length = 533
Score = 301 bits (770), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 173/452 (38%), Positives = 262/452 (57%), Gaps = 28/452 (6%)
Query: 23 LYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKR---PEEMENLVRDLWKANMR-- 77
LY Y P +V +++FE A++RLR+L+ + A R R E EN+ DL + +R
Sbjct: 30 LYHYPPTEDVHIDEFEELALERLRLLRILDRASTRHPRLLSDEWKENVSADLTREGLRSY 89
Query: 78 -----------HPEASEDVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSS 126
H + +D +SHF+LRL YCR+EDL +WF++ E L+RY+F SS
Sbjct: 90 LRLCSPGGSTKHEADIQTRRRDYLSHFILRLAYCRSEDLARWFVAREMELFRYKFAALSS 149
Query: 127 EAKRALMEEFDLPCKAISRTEFENAKEKL-EQVARSFDQPLPTADAIFYKVPFEEVPELV 185
+ +E ++ + + K+ L E A + D FYKVPF +V +LV
Sbjct: 150 AEVKQFLEANGFEIHPLTEAQKDEVKDGLYESTAGQSVAKIELLD--FYKVPFTQVLDLV 207
Query: 186 AGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERD-RLTPIVE 244
GRR Y+ G AYV H +VSLV T+ + + + L + + + + E D R++ ++
Sbjct: 208 RGRRCYLKAGFAYVNTHDLVSLVGTKQQDEIEQGL----QAAKTMVEDVEADERISRTLK 263
Query: 245 ALSMSYLGPDYSQTKEFGEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGL 304
AL SY G DY+ ++ I I+ LDQL+++S PLCMR + +R HH+KH GRMQ GL
Sbjct: 264 ALHNSYTGRDYTVCRD-AAIPIESLDQLSKTSMPLCMRMCHEHIRAQHHIKHNGRMQYGL 322
Query: 305 FLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQKIIS 364
F+KG+G+ +ED+L FW+ EF++K+ A++F + Y Y+I HNYGK+G +YTPYSC KII
Sbjct: 323 FMKGIGVTLEDSLRFWREEFTKKMDADKFARGYEYNIYHNYGKKGSMVNYTPYSCAKIIK 382
Query: 365 STPGVGDHHGCPYRHFSEENLRAALGRMGVGSRAMEDVVDKVRNRHYQLACTLTFEAVHS 424
G GD HGCPY+ + +L++ L G+ + A+++V+ V HYQ+AC F+ H+
Sbjct: 383 DATGPGDCHGCPYKFMDQGSLKSKLSSYGLSASAVDEVMFFVSRGHYQIACGKYFQLTHN 442
Query: 425 SSCDAGINHPNQYFSDSHKIL---QPKNNNAA 453
SS + INHPN YF +S + Q + N A
Sbjct: 443 SSVEPTINHPNNYFEESQITMGNRQKRTNGPA 474
>gi|402224500|gb|EJU04562.1| DNA primase large subunit [Dacryopinax sp. DJM-731 SS1]
Length = 505
Score = 300 bits (768), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 173/464 (37%), Positives = 263/464 (56%), Gaps = 35/464 (7%)
Query: 21 LPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEEMENL-VRDLWK-----A 74
L Y PQ ++ +EDFE FA+DRLRVL I +L R + PEE+ + V K A
Sbjct: 28 LNFYEKPPQGDLTVEDFETFAIDRLRVLAEIESSLIRNRSPEELRLITVAQCAKYLPLSA 87
Query: 75 NMRHPEASEDVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKRALME 134
N + + KD ISHFVLRL +CR+E+LR+ F+ ET L+R RF + + A ++
Sbjct: 88 NTSTKDLISERRKDQISHFVLRLAFCRSEELRRRFVKAETTLFRIRFADDDTRERAAFLD 147
Query: 135 EFDLPCKAISRTEFENA------KEKLEQVARSFDQPLPTADAIFYKVPFEEVPELVAGR 188
L + + E A + + E + R Q + FYK P+ +VPELV R
Sbjct: 148 SIKLNWEKVDEEERREAHIKAGLQAQAEYLKRDERQREDYLEDTFYKTPWTQVPELVERR 207
Query: 189 RVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEALSM 248
RV++ KG AYV + +LV +F++ L +AL +T + + R E DRL P++E LS
Sbjct: 208 RVFLWKGWAYVPSREQSTLVFQEFQNRLEQALEITAK---ALPRLDEDDRLLPVLEHLSR 264
Query: 249 SYLGPDYSQ----TKEFGEISIKDL-DQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLG 303
+L S+ +FGE D+ D +A FP+CMR+L D+LR+D HLKH GR+Q
Sbjct: 265 GFLAGVASEYVGPEDDFGETITADMIDDMAAKHFPMCMRNLHDRLRKDRHLKHFGRLQYT 324
Query: 304 LFLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQKII 363
LFLKG+G+ +E+A+ FW+ + + ++F+KEY Y+IRH+YG EGKR +Y SCQ I+
Sbjct: 325 LFLKGLGVSVEEAVVFWRKAYGGTMTDDKFNKEYKYNIRHSYGLEGKRANYPAKSCQTIL 384
Query: 364 SST-PGVGDHHGCPYRHFSEENLRAAL-GRMGVGSRAMEDVVDKVRNRHYQLACTLTFEA 421
++ PG + HGCP+RHFS ENL+ AL G+ + +++ V+ +HY +ACT FE
Sbjct: 385 TTNQPGPTESHGCPFRHFSPENLQLALSATYGIPASDQGEIMAAVKGQHYHIACTRVFEL 444
Query: 422 VH-------------SSSCDAGINHPNQYFSDSHKILQPKNNNA 452
H ++ ++HPN+Y + S ++ + K++
Sbjct: 445 THVKYGVKMGDGLGRANGATETVSHPNRYAARSREMEKEKSDKG 488
>gi|195591821|ref|XP_002085637.1| GD12199 [Drosophila simulans]
gi|194197646|gb|EDX11222.1| GD12199 [Drosophila simulans]
Length = 533
Score = 298 bits (764), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 169/451 (37%), Positives = 262/451 (58%), Gaps = 26/451 (5%)
Query: 23 LYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKR--PEEMENLVR-DLWKANMR-- 77
+Y Y P +V +++FE A++RLR+L+ + A R R +E + +V DL + +R
Sbjct: 30 MYHYPPTEDVHIDEFEELALERLRLLRVLDRASTRNLRVLSDEWKEIVSADLTREGLRSY 89
Query: 78 -----------HPEASEDVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSS 126
H + +D +SHF+LRL YCR+EDL +WF++ E L+RY+F SS
Sbjct: 90 LRLCSNGGSGKHEADIQTRRRDYLSHFILRLAYCRSEDLARWFVAREMELFRYKFAALSS 149
Query: 127 EAKRALMEEFDLPCKAISRTEFENAKEKL-EQVARSFDQPLPTADAIFYKVPFEEVPELV 185
+ +E ++ + + K+ L E A + D FYKVPF +V +LV
Sbjct: 150 AEVKQFLESNGFEIHPLTEAQKDEVKDGLYESTAGQSVAKIELLD--FYKVPFTQVLDLV 207
Query: 186 AGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEA 245
GRR Y+ G+AYV H +VSLV T+ + + + L T + DR++ ++A
Sbjct: 208 RGRRCYLKAGYAYVNTHDLVSLVGTKQQDEIEQGLQAAK---TMVDDVEADDRISRTLKA 264
Query: 246 LSMSYLGPDYSQTKEFGEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLF 305
L SY G DY+ ++ + I+ LDQL+++S PLCMR + +R +HH+KH GRMQ GLF
Sbjct: 265 LHNSYTGRDYTVCRD-AAVPIESLDQLSKTSMPLCMRICHEHIRANHHIKHTGRMQYGLF 323
Query: 306 LKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQKIISS 365
LKG+G+ +ED+L FW+ EF++K+ +++F + Y Y+I HNYGK+G +YTPYSC KII
Sbjct: 324 LKGIGVTLEDSLRFWREEFTKKMDSDKFTRSYEYNIYHNYGKKGSMVNYTPYSCAKIIKD 383
Query: 366 TPGVGDHHGCPYRHFSEENLRAALGRMGVGSRAMEDVVDKVRNRHYQLACTLTFEAVHSS 425
G GD HGCPY++ + +L++ L G+ + A+E+V+ V HYQ+ C F+ H+S
Sbjct: 384 VAGPGDCHGCPYKNMDQGSLKSKLSSYGLSASAIEEVMFFVSRGHYQIGCGKYFQLTHNS 443
Query: 426 SCDAGINHPNQYFSDSHKIL---QPKNNNAA 453
+ INHPN YF +S + Q + N +A
Sbjct: 444 PVEPSINHPNNYFEESQMAMGNRQKRANGSA 474
>gi|388580702|gb|EIM21015.1| DNA primase, large subunit [Wallemia sebi CBS 633.66]
Length = 496
Score = 298 bits (764), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 169/460 (36%), Positives = 263/460 (57%), Gaps = 41/460 (8%)
Query: 21 LPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEEMENLVR-------DLWK 73
L Y+ AP LEV LE+FE +A+DRL+VL I + R + ++M +++ +L
Sbjct: 27 LNFYQDAPLLEVSLEEFESWAIDRLKVLAEIEASQVRNRSFQDMRTVIQTQCKKLLNLSS 86
Query: 74 ANMRHPEASEDVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKRALM 133
MR + KD +SH+VLRL +CR+E+LR+ F+ ET L+R RF S+ + A +
Sbjct: 87 NTMRSSTLDAERKKDHVSHYVLRLAFCRSEELRRRFVKAETTLFRIRFDDASTSERNAFL 146
Query: 134 EEFDLPCKAISRTEFENA----KEKLEQVARSFDQPLPTADA-------IFYKVPFEEVP 182
+ L SR ++E KE L+ + + + + + + +YKV + +VP
Sbjct: 147 QS--LKNSQSSRIDWEEVDSIEKESLKDLLTNSNPAIAISKSGNEFDKETYYKVKWTQVP 204
Query: 183 ELVAGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPI 242
ELV RRV++ +G+AYV M SL++ F S L++AL T + + R E RL P+
Sbjct: 205 ELVERRRVFLKEGYAYVPMRDQTSLIMNSFSSQLTQALEYTAK---ALPRLDEDSRLLPV 261
Query: 243 VEALSMSYLGPDYSQTKEFG------EISIKDLDQLARSSFPLCMRHLFDKLREDHHLKH 296
+ LSMS+L S+ + +IS + +D LA+ FP+CMR+L L+ +HHLKH
Sbjct: 262 LSHLSMSFLAGLSSEAFDPATYSSDRKISAESIDILAKKHFPMCMRNLHGNLQSNHHLKH 321
Query: 297 GGRMQLGLFLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTDYTP 356
GR+Q LFLKG+GL +++A+ FW+ + + ++F+KEY Y+IRHNYG EG R Y P
Sbjct: 322 FGRLQYSLFLKGIGLSVDEAIVFWRKSYGASISDDKFNKEYRYNIRHNYGLEGSRRAYPP 381
Query: 357 YSCQKIISS-TPGVGDHHGCPYRHFSEENLRAAL-GRMGV-GSRAMEDVVDKVRNRHYQL 413
SCQKII+ PG D+HGCP+RHFS +NL +L G+ + + ++ V+ +H+ +
Sbjct: 382 RSCQKIITQDQPGPQDNHGCPFRHFSLDNLVPSLRATYGITDANDLNEITGAVKAQHFHV 441
Query: 414 ACTLTFEAVHSS---------SCDAGINHPNQYFSDSHKI 444
ACT FE H++ +NHPN+YF S ++
Sbjct: 442 ACTRVFEITHANKGVTKGDGLGNGESVNHPNRYFERSLQL 481
>gi|189241229|ref|XP_971878.2| PREDICTED: similar to DNAprim CG5553-PA [Tribolium castaneum]
gi|270013987|gb|EFA10435.1| hypothetical protein TcasGA2_TC012678 [Tribolium castaneum]
Length = 467
Score = 298 bits (763), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 160/452 (35%), Positives = 243/452 (53%), Gaps = 34/452 (7%)
Query: 21 LPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEEMENLVRDLWKANMRHPE 80
+ +YR +P+ E+ + +FE A+DRL++L+ I A +G R L D WK ++
Sbjct: 27 VSMYRESPKSEISILEFEQIALDRLKLLRIIEQAAPKGNR------LYSDQWKTCIKDDL 80
Query: 81 ASEDVNK---------------------DIISHFVLRLVYCRTEDLRKWFLSMETALYRY 119
A + K D +SHF+LRL YCR+E LR+WFLS E +
Sbjct: 81 AKAGLKKYVRLMGGTSGTSDLDYQARKADYLSHFILRLAYCRSEQLRRWFLSRELEWFWI 140
Query: 120 RFLLGSSEAKRALMEEFDLPCKAISRTEFENAKEKLEQVARSFDQPLPTADAIFYKVPFE 179
RF S E + + + IS E + + +LE + + F+KVPF
Sbjct: 141 RFTAQSREGVKNFLRLYKFSYTPISEEEKVSLRHELEASTAGL---ILFEETEFFKVPFT 197
Query: 180 EVPELVAGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRL 239
EV LV GR+V++ G AY+ ++V + ++FR+ LS+ L ++ I + +R+
Sbjct: 198 EVCSLVRGRKVFLKAGFAYIPSSELVVCIQSKFRAELSEELTW----YSHRIHLFDDERI 253
Query: 240 TPIVEALSMSYLGPDYSQTKEFGEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGR 299
P++ + G +Y + + DLD A+ FPLCM+H+ + LR +HH KH GR
Sbjct: 254 GPLLSNFHNLHTGQNYRVRENHESVDPADLDAYAKKHFPLCMKHMHEVLRSEHHHKHQGR 313
Query: 300 MQLGLFLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSC 359
+ GLFLK +GL EDAL FW+ EF++K+ +F+K Y Y+I+H YG GKR Y+PYSC
Sbjct: 314 LTYGLFLKAIGLLYEDALKFWRDEFTKKMDLNQFEKGYVYNIKHMYGLVGKRASYSPYSC 373
Query: 360 QKIISSTPGVGDHHGCPYRHFSEENLRAALGRMGVGSRAMEDVVDKVRNRHYQLACTLTF 419
KII+S+ G G+HHGCP++H+ ++ + GV ++ V + HYQLAC F
Sbjct: 374 VKIITSSVGPGEHHGCPFKHWDVNLVKQKVIECGVSVDGANEIKQLVSDGHYQLACGKYF 433
Query: 420 EAVHSSSCDAGINHPNQYFSDSHKILQPKNNN 451
E H + GINHPNQYF +S I + + N
Sbjct: 434 EYTHGKALGNGINHPNQYFEESMNIEKGASGN 465
>gi|390363647|ref|XP_795210.3| PREDICTED: DNA primase large subunit-like [Strongylocentrotus
purpuratus]
Length = 476
Score = 298 bits (763), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 173/438 (39%), Positives = 247/438 (56%), Gaps = 27/438 (6%)
Query: 21 LPLYRYAPQLEVRLEDFEVFAMDRLRVLK-----GISDALARGKRPEEMENLVRDLWKAN 75
L YR P + L +FE A RL VLK GI + E M+ ++ L
Sbjct: 26 LLFYRIPPIENISLSEFEELAKRRLAVLKHVESVGIRHVKGSEEYNERMDKELKKLMPIA 85
Query: 76 MRHPEASEDV----NKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKRA 131
R + ED+ D ISHF+LRL YCR+EDLR+WF+ E L+RYRFL SE+
Sbjct: 86 HR-KMSGEDLAAHKRDDRISHFILRLAYCRSEDLRRWFIQQELDLFRYRFLREYSESVTQ 144
Query: 132 LMEEFDLPCKAISRTEFENAKEKLEQVARSFDQPLPTADAIFYKVPFEEVPELVAGRRVY 191
+ E L I E + EKL + + + A F+KVPF E +LV GR+V+
Sbjct: 145 FLAENKLHYTPIPENEKDALNEKLVRSSSGISASM-MAHTDFFKVPFTEALDLVRGRKVF 203
Query: 192 IHKGHAYVAMHQVVSLVVTQFRSNLSKALI-LTNRKWTSTIREQERDRLTPIVEALSMSY 250
I KG+A+V ++VS+V+T FRS+LS++L +N K S + + LS Y
Sbjct: 204 IQKGYAFVPHSELVSIVITAFRSHLSQSLADYSNSKSPSLV-----------LNNLSNQY 252
Query: 251 LGPDYSQTKEFGE--ISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKG 308
G DYS + G I+++DLD+ ++ SFPLCMR L L+E HHL+HGGRMQ GLFLKG
Sbjct: 253 PGQDYSSSNWSGNSTINLEDLDEYSKQSFPLCMRQLHMSLKEHHHLRHGGRMQYGLFLKG 312
Query: 309 VGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQKIISSTPG 368
+G+ +E A+ FW++EF++ + ++FDK+Y+Y+IRHNYGKEGKR +Y
Sbjct: 313 IGMTLEQAMTFWRSEFTRIMDMDKFDKQYSYNIRHNYGKEGKRANYXXXXXXXXXXXXXX 372
Query: 369 VGD-HHGCPYRHFSEENLRAALGRMGVGSRAMEDVVDKVRNRHYQLACTLTFEAVHS-SS 426
GCP+RH L+ L G+ + ++ V++ V+ HYQLACT FE H+
Sbjct: 373 XXXLSQGCPFRHTDGALLKQRLSTFGLTQQGVDQVMELVKGHHYQLACTRYFELSHNVPE 432
Query: 427 CDAGINHPNQYFSDSHKI 444
+ +NHPNQYF +S ++
Sbjct: 433 TEFLLNHPNQYFEESLRV 450
>gi|391336985|ref|XP_003742855.1| PREDICTED: DNA primase large subunit-like [Metaseiulus
occidentalis]
Length = 508
Score = 298 bits (762), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 174/460 (37%), Positives = 266/460 (57%), Gaps = 28/460 (6%)
Query: 8 RSRTNTPNDSVSTLPLYRYAPQLEVRLEDFEVF---AMDRLRVLKGISDALARGKRP--E 62
R+R+N + ++ L +Y + + D E F A RL++L+ I + +R R E
Sbjct: 14 RNRSNM--ERITLLDMYEDSRDILPDFCDIEYFYDAAYKRLQILQCIEELSSRISRKDNE 71
Query: 63 EMENLVRDLWKANMRH-PEASEDVNK--------------DIISHFVLRLVYCRTEDLRK 107
+ L+ L ++RH + + +V K D+ISHF LRL YC++E+LR+
Sbjct: 72 YQDKLLASLTSKSLRHWVDITVEVEKAQKRADDRRETKRMDLISHFTLRLAYCQSEELRR 131
Query: 108 WFLSMETALYRYRFLLGSSEAKRALMEEFDLPCKAISRTEFENAKEKLEQVARSFDQPLP 167
WFL ET L+R+R S+E +A E+++L A+S E + AR
Sbjct: 132 WFLQWETELFRFRLERESTEMVQAFQEDWNLTFDAVSDDEKLRVMASV-AAARPQTSVAV 190
Query: 168 TADAIFYKVPFEEVPELVAGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKW 227
A + +KV F VP++VA RRVY++KG AY+ S+VV +FRS LS+ +LT
Sbjct: 191 IASSCLHKVHFSMVPDMVAKRRVYVNKGMAYLLPEDTRSIVVAEFRSYLSR--VLTKLST 248
Query: 228 TSTIREQERDRLTPIVEALSMSYLGPDYSQTKEFGEISIKDLDQLARSSFPLCMRHLFDK 287
S+I ++ D++ P+++ L+ + + + +E G +S DLDQL++ +FPLCM + D
Sbjct: 249 CSSIYLKD-DQVAPLMKLLARRQIQAERT-FREEGSVSPADLDQLSKDAFPLCMSMMHDN 306
Query: 288 LREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGK 347
LR HHLKH GR+ LFLKG+GL M+D+L F+ EF++ +G ++F+KEYAY+IRH+YGK
Sbjct: 307 LRGKHHLKHTGRLAYTLFLKGIGLSMDDSLKFFGQEFAKSIGPDKFNKEYAYAIRHSYGK 366
Query: 348 EGKRTDYTPYSCQKIIS-STPGVGDHHGCPYRHFSEENLRAALGRMGVGSRAMEDVVDKV 406
EGKR DY PY+C KI++ P + HGCPY+ + L+ L V + + DV+ V
Sbjct: 367 EGKRADYRPYNCMKIVNLHNPSGVECHGCPYKVLDPDALKVRLRSYNVTAGVINDVMSDV 426
Query: 407 RNRHYQLACTLTFEAVHSSSCDAGINHPNQYFSDSHKILQ 446
+N +YQ ACT FE + I HPNQY+ +S K+LQ
Sbjct: 427 KNSNYQAACTKVFECRSRVVLNTTIVHPNQYYEESVKVLQ 466
>gi|393911309|gb|EJD76255.1| hypothetical protein LOAG_16754 [Loa loa]
Length = 507
Score = 297 bits (761), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 170/449 (37%), Positives = 254/449 (56%), Gaps = 27/449 (6%)
Query: 20 TLPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEEMENLVRDLWKANMRH- 78
L +Y P ++ L +F+ A+ RLRVLK + + + P E E + L K M+
Sbjct: 33 NLQMYLEPPMDDITLLEFQELALSRLRVLKAVEQV--KDRFPRETEAMKNQLTKQLMKLM 90
Query: 79 ---------PEASEDVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSS--E 127
E + +D+ISHF+LRL +C+T + KWF+ E L+++RF + S E
Sbjct: 91 PIACGCCPLEELENERRRDVISHFILRLAFCQTPEQTKWFIQQEMDLFKFRFQIVSKSYE 150
Query: 128 AKRALMEEFDLPCKAISRTEFENAKEKLEQVARSFDQPLPTADAI-FYKVPFEEVPELVA 186
A ++ + + ++ E N KE L + + PL + F+KVPFE+ +LV
Sbjct: 151 AVTQFLQANNFDAQLVTDVEKGNLKEDL---SNACSIPLSKVTSTSFWKVPFEDALDLVR 207
Query: 187 GRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEAL 246
RRV + GHA+V+ + ++ T+ R N++ A+ R + + +E DRL P + +L
Sbjct: 208 KRRVLLVFGHAFVSEDDLQVILCTRLRLNIAAAMAHACR---NIVFIEENDRLMPFLRSL 264
Query: 247 SM-SYLGPDYSQTKEFGEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLF 305
S SY+G +Y + ++ +D LA +SFPLCMR++ ++LR DHHL+HG RMQ GLF
Sbjct: 265 SSRSYVGKNYIGM-DGSHVTPDMVDSLAATSFPLCMRNIHNRLRADHHLRHGARMQYGLF 323
Query: 306 LKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQKII-S 364
LK +G+ +EDAL FW+AEF++K+ ++FDK+YAY+IRHNYGKEGK DY+ Y C KII
Sbjct: 324 LKAIGMTLEDALLFWRAEFTKKMDPDKFDKQYAYNIRHNYGKEGKHADYSAYPCTKIILD 383
Query: 365 STPGVGDHHGCPYRHFSEENLRAALGRMGVGSRAMEDVVDKVRNRHYQLACTLTFEAVHS 424
S+P D HGCPYRH + L L G+ +E + +N Y ACT FE H
Sbjct: 384 SSPSSADCHGCPYRHSDLQPLVQNLRSSGLSKSQIEHITLLSKNTQYDKACTRYFEFSHK 443
Query: 425 ---SSCDAGINHPNQYFSDSHKILQPKNN 450
+S I HPNQYF S ++ + K N
Sbjct: 444 MVENSLGTVITHPNQYFELSRQVHEGKRN 472
>gi|195348221|ref|XP_002040649.1| GM22227 [Drosophila sechellia]
gi|194122159|gb|EDW44202.1| GM22227 [Drosophila sechellia]
Length = 533
Score = 297 bits (761), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 169/451 (37%), Positives = 262/451 (58%), Gaps = 26/451 (5%)
Query: 23 LYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKR--PEEMENLVR-DLWKANMR-- 77
+Y Y P +V +++FE A++RLR+L+ + A R R +E + +V DL + +R
Sbjct: 30 MYHYPPTEDVHIDEFEELALERLRLLRVLDRASTRNLRVLSDEWKEIVSADLTREGLRSY 89
Query: 78 -----------HPEASEDVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSS 126
H + +D +SHF+LRL YCR+EDL +WF++ E L+RY+F SS
Sbjct: 90 LRLCSNGGSGKHEADIQTRRRDYLSHFILRLAYCRSEDLARWFVAREMELFRYKFAALSS 149
Query: 127 EAKRALMEEFDLPCKAISRTEFENAKEKL-EQVARSFDQPLPTADAIFYKVPFEEVPELV 185
+ +E ++ + + K+ L E A + D FYKVPF +V +LV
Sbjct: 150 AEVKQFLESNGFEIHPLTEDQKDEVKDGLYESTAGQSVAKIELLD--FYKVPFTQVLDLV 207
Query: 186 AGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEA 245
GRR ++ G+AYV H +VSLV T+ + + + L T + DR++ ++A
Sbjct: 208 RGRRCFLKAGYAYVNTHDLVSLVGTKQQDEIEQGLQAAK---TMVDDVEADDRISRTLKA 264
Query: 246 LSMSYLGPDYSQTKEFGEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLF 305
L SY G DY+ ++ + I+ LDQL+++S PLCMR + +R +HH+KH GRMQ GLF
Sbjct: 265 LHNSYTGRDYTICRD-AAVPIESLDQLSKTSMPLCMRICHEHIRANHHIKHTGRMQYGLF 323
Query: 306 LKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQKIISS 365
LKG+G+ +ED+L FW+ EF++K+ A++F + Y Y+I HNYGK+G +YTPYSC KII
Sbjct: 324 LKGIGVTLEDSLRFWREEFTKKMDADKFTRSYEYNIYHNYGKKGSMVNYTPYSCAKIIKD 383
Query: 366 TPGVGDHHGCPYRHFSEENLRAALGRMGVGSRAMEDVVDKVRNRHYQLACTLTFEAVHSS 425
G GD HGCPY++ + +L++ L G+ + A+E+V+ V HYQ+ C F+ H+S
Sbjct: 384 VAGPGDCHGCPYKNMDQGSLKSKLSSYGLSASAIEEVMFFVSRGHYQIGCGKYFQLTHNS 443
Query: 426 SCDAGINHPNQYFSDSHKIL---QPKNNNAA 453
+ INHPN YF +S + Q + N +A
Sbjct: 444 PVEPSINHPNNYFEESQMAMGNRQKRANGSA 474
>gi|125978585|ref|XP_001353325.1| GA18964 [Drosophila pseudoobscura pseudoobscura]
gi|54642079|gb|EAL30828.1| GA18964 [Drosophila pseudoobscura pseudoobscura]
Length = 537
Score = 296 bits (759), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 172/480 (35%), Positives = 270/480 (56%), Gaps = 48/480 (10%)
Query: 1 MEIVRSQRSRTNTPNDSVS-------TLPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISD 53
ME +R+R + + VS + +Y Y P ++ +E+FE A++RLR+L+ +
Sbjct: 1 MEFHLKKRARNDVKVEVVSLESKYPHNVMMYYYPPTDDIHIEEFEELALERLRLLRVLDR 60
Query: 54 ALARGKRPEEMENLVRDLWKANM--------------------------RHPEASEDVNK 87
A +G R L+ D WK + +H + +
Sbjct: 61 AGTKGLR------LLSDDWKEYVSSELTREGLRSYLRLCSPGGGSAQGSKHESEIQTRRR 114
Query: 88 DIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKRALMEEFDLPCKAISRTE 147
D +SHF+LRL YCR+EDL +WF++ E L+RY+F SS + +E D + ++ +E
Sbjct: 115 DYLSHFILRLAYCRSEDLSRWFVAREMELFRYKFAALSSAEVKQFLEANDFSFQPLTESE 174
Query: 148 FENAKEKL-EQVARSFDQPLPTADAIFYKVPFEEVPELVAGRRVYIHKGHAYVAMHQVVS 206
+ K+ L E A + D FYKVPF +V +LV GRR Y+ G AYV H +VS
Sbjct: 175 KDEVKDGLYESTAGQSVSKIELLD--FYKVPFTQVLDLVRGRRCYLKDGFAYVNTHDLVS 232
Query: 207 LVVTQFRSNLSKALILTNRKWTSTIREQERD-RLTPIVEALSMSYLGPDYSQTKEFGEIS 265
+V T+ + + L+ + I E E D R++ +++AL SY G DY+ ++ ++
Sbjct: 233 VVGTKQQDIMELGLLASK----GLIEEVEGDERISRMLKALHNSYTGKDYTVCRD-AAVA 287
Query: 266 IKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWKAEFS 325
I+ L+QL+++S PLCMR + +R HH+KHGGRMQ GLFLKG+G+ +ED++ FW+ EF+
Sbjct: 288 IESLNQLSKTSMPLCMRMCHEHIRAQHHVKHGGRMQYGLFLKGIGVTLEDSIRFWREEFT 347
Query: 326 QKVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQKIISSTPGVGDHHGCPYRHFSEENL 385
+K+ A++F + Y Y+I HNYGK+G +Y+PYSC KII GD HGCPY+ + +L
Sbjct: 348 KKMDADKFTRSYEYNIHHNYGKKGSMVNYSPYSCAKIIKEMAAPGDCHGCPYKSEDQASL 407
Query: 386 RAALGRMGVGSRAMEDVVDKVRNRHYQLACTLTFEAVHSSSCDAGINHPNQYFSDSHKIL 445
+ L G+ + +E+V+ V HYQ+AC F H+S+ + INHPN YF +S ++
Sbjct: 408 KTKLASYGLSTSHIEEVMFFVSRGHYQIACGKYFMLTHNSNVEPTINHPNTYFEESQILM 467
>gi|224009688|ref|XP_002293802.1| DNA primase [Thalassiosira pseudonana CCMP1335]
gi|220970474|gb|EED88811.1| DNA primase [Thalassiosira pseudonana CCMP1335]
Length = 436
Score = 296 bits (759), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 170/445 (38%), Positives = 257/445 (57%), Gaps = 29/445 (6%)
Query: 17 SVSTLPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEEMENLVRDLWKANM 76
+ + + +Y P E+ L++FE +A+ RL+VL+ I + R P++ + + K N+
Sbjct: 1 NAADVDMYLETPAFELSLDEFEEYALARLKVLRKIEEMKTRNLPPDQFTSQLSASIKTNL 60
Query: 77 RHPEASEDVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRF---LLGSSEAKRALM 133
S DI SHF+LR YCRTEDLR+WFL+ E L+R+R SS+ R +
Sbjct: 61 N----STSKKVDIASHFILRAAYCRTEDLRRWFLAQECRLFRHRLDNCAKRSSDGLRDFL 116
Query: 134 --EEFDLPCKAISRTEFENAKEKLEQVARSFDQPLPTADAIFYKVPFEEVPELVAGRRVY 191
EFDL + E E ++KL V S PL +Y+VPF + ELV+ R +
Sbjct: 117 ARNEFDL--DRVQGREKERLRDKLLSVPGS-PNPLEFNATEYYRVPFVQALELVSKRECF 173
Query: 192 IHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEALSMSYL 251
+ KG AYV + ++VS+V +FR+ LSK+L L + + E R+ P++++++ Y
Sbjct: 174 VEKGFAYVPLGRIVSIVAAKFRATLSKSLALAAGVF-GQVANDESSRIGPLLKSMNSQYT 232
Query: 252 GPDYSQT--KEFGE--ISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLK 307
GP GE ++ +D LA S PLCM+ L L+ DH LKH GR+Q GLFLK
Sbjct: 233 GPGAPNAVMDASGENALTAATVDALAAQSMPLCMQQLHVGLKRDHKLKHQGRLQYGLFLK 292
Query: 308 GVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQKIISSTP 367
G G+ ME+ + F++ EF++ + +E+F+K YAY+IRH +GKEGKR YTPY+C KII P
Sbjct: 293 GAGMPMEEHMLFFQREFTKIMTSEQFNKNYAYNIRHTHGKEGKRATYTPYNCMKIIFGNP 352
Query: 368 ---GVGDHHGCPYRHFSEENLRAALGRMGVGSRAMED-VVDKVRNRHYQLACTLTFEAVH 423
GV +HHGCPY+H+ ++NL A L ++ +G + D ++ + ++QLACT FE +H
Sbjct: 353 PQTGV-EHHGCPYKHYDDQNLSALLTKLKIGGLSDRDAIMAHKKEGNFQLACTKHFEVMH 411
Query: 424 SSSC-------DAGINHPNQYFSDS 441
++ D NHPN +FS S
Sbjct: 412 PAATSVEGINLDGVGNHPNAWFSAS 436
>gi|195160377|ref|XP_002021052.1| GL25038 [Drosophila persimilis]
gi|194118165|gb|EDW40208.1| GL25038 [Drosophila persimilis]
Length = 537
Score = 296 bits (759), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 148/371 (39%), Positives = 228/371 (61%), Gaps = 9/371 (2%)
Query: 77 RHPEASEDVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKRALMEEF 136
+H + +D +SHF+LRL YCR+EDL +WF++ E L+RY+F SS + +E
Sbjct: 104 KHESEIQTRRRDYLSHFILRLAYCRSEDLSRWFVAREMELFRYKFAALSSAEVKQFLEAN 163
Query: 137 DLPCKAISRTEFENAKEKL-EQVARSFDQPLPTADAIFYKVPFEEVPELVAGRRVYIHKG 195
D + ++ +E + K+ L E A + D FYKVPF +V +LV GRR Y+ G
Sbjct: 164 DFSFQPLTESEKDEVKDGLYESTAGQSVSKIELLD--FYKVPFTQVLDLVRGRRCYLKDG 221
Query: 196 HAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERD-RLTPIVEALSMSYLGPD 254
AYV H +VS+V T+ + + L+ + I E E D R++ +++AL SY G D
Sbjct: 222 FAYVNTHDLVSVVGTKQQDIMELGLLASK----GLIEEVEGDERISRMLKALHNSYTGKD 277
Query: 255 YSQTKEFGEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRME 314
Y+ ++ ++I+ L+QL+++S PLCMR + +R HH+KHGGRMQ GLFLKG+G+ +E
Sbjct: 278 YTVCRD-AAVAIESLNQLSKTSMPLCMRMCHEHIRAQHHVKHGGRMQYGLFLKGIGVTLE 336
Query: 315 DALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQKIISSTPGVGDHHG 374
D++ FW+ EF++K+ A++F + Y Y+I HNYGK+G +Y+PYSC KII GD HG
Sbjct: 337 DSIRFWREEFTKKMDADKFTRSYEYNIHHNYGKKGSMVNYSPYSCAKIIKEMAAPGDCHG 396
Query: 375 CPYRHFSEENLRAALGRMGVGSRAMEDVVDKVRNRHYQLACTLTFEAVHSSSCDAGINHP 434
CPY+ + +L+ L G+ + +E+V+ V HYQ+AC F H+S+ + INHP
Sbjct: 397 CPYKSEDQASLKTKLASYGLSTSHIEEVMFFVSRGHYQIACGKYFMLTHNSNVEPTINHP 456
Query: 435 NQYFSDSHKIL 445
N YF +S ++
Sbjct: 457 NTYFEESQILM 467
>gi|24667411|ref|NP_652001.2| DNA polymerase alpha 60kD [Drosophila melanogaster]
gi|34395842|sp|Q9VPH2.2|PRI2_DROME RecName: Full=DNA primase large subunit; AltName: Full=Suppressor
of fat facets 240
gi|9885824|gb|AAG01548.1| DNA primase [Drosophila melanogaster]
gi|10726910|gb|AAF51580.2| DNA polymerase alpha 60kD [Drosophila melanogaster]
gi|385719240|gb|AFI71918.1| MIP29196p1 [Drosophila melanogaster]
Length = 533
Score = 296 bits (758), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 167/452 (36%), Positives = 266/452 (58%), Gaps = 28/452 (6%)
Query: 23 LYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKR--PEEMENLVR-DLWKANMR-- 77
LY Y P +V +++FE A++RLR+L+ + A R R +E + +V DL + +R
Sbjct: 30 LYHYPPTEDVHIDEFEELALERLRLLRVLDRASTRNLRVLSDEWKEIVSADLTREGLRSY 89
Query: 78 -----------HPEASEDVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSS 126
H + +D +SHF+LRL YCR+EDL +WF++ E L+RY+F SS
Sbjct: 90 LRLCSTGGSAKHEADIQTRRRDYLSHFILRLAYCRSEDLARWFVAREMELFRYKFAALSS 149
Query: 127 EAKRALMEEFDLPCKAISRTEFENAKEKLEQVARSFDQPLPTADAI-FYKVPFEEVPELV 185
+ +E ++ + + K+ L + + Q + + + FYKVPF +V +LV
Sbjct: 150 FEVKQFLEANGFEIHPLTEAQKDEVKDGLYE--STVGQSVAKIELLDFYKVPFTQVLDLV 207
Query: 186 AGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERD-RLTPIVE 244
GRR ++ G+AYV H +VSLV T+ + + + L + + + + E D R++ ++
Sbjct: 208 RGRRCFLKAGYAYVNTHDLVSLVGTKQQDEIEQGL----QAAKTMVEDVEADERISRTLK 263
Query: 245 ALSMSYLGPDYSQTKEFGEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGL 304
AL SY G DY+ ++ + I+ LDQL+++S PLCMR + +R +HH+KH GRMQ GL
Sbjct: 264 ALHNSYTGRDYTVCRD-AAVPIESLDQLSKTSMPLCMRMCHEHIRANHHIKHSGRMQYGL 322
Query: 305 FLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQKIIS 364
FLKG+G+ +ED+L FW+ EF++K+ A++F + Y Y+I HNYGK+G +YTPYSC KII
Sbjct: 323 FLKGIGVALEDSLRFWREEFTKKMDADKFTRSYEYNIYHNYGKKGSMVNYTPYSCAKIIK 382
Query: 365 STPGVGDHHGCPYRHFSEENLRAALGRMGVGSRAMEDVVDKVRNRHYQLACTLTFEAVHS 424
G GD HGCPY++ + +L+ L G+ + A+++V+ V HYQ+ C F+ H+
Sbjct: 383 DVAGPGDCHGCPYKNMDQGSLKTKLSSYGLSASAIDEVMFFVSRGHYQIGCGKYFQLTHN 442
Query: 425 SSCDAGINHPNQYFSDSHKIL---QPKNNNAA 453
S + INHPN YF +S + Q + N +A
Sbjct: 443 SPVEPSINHPNNYFEESQIAMGNRQKRANGSA 474
>gi|430814427|emb|CCJ28329.1| unnamed protein product [Pneumocystis jirovecii]
Length = 451
Score = 295 bits (755), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 173/451 (38%), Positives = 262/451 (58%), Gaps = 36/451 (7%)
Query: 15 NDSVSTLPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEEMENLVRDLWKA 74
N+ + L Y AP E+ +E+FE +A+ RL VL I L R + +E++ +++ L +
Sbjct: 24 NEYPNRLNFYLEAPNEEITIEEFENWAISRLCVLSEIESGLFRNRTLKEIDIMLKPLIEK 83
Query: 75 NM-------RHPEAS---EDVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLG 124
++ R + S E+ KD SH++L+L +CR+E+LRK F+ ETAL++ RFL
Sbjct: 84 HLPLSSNISRSLKGSLIDEERKKDHYSHYILKLAFCRSEELRKRFVRAETALFKLRFLQD 143
Query: 125 SSEAKRALMEEFDLPCKAISRTEFENAKEKLEQVARSFDQPLPTADAIFYKVPFEEVPEL 184
S+ + + + + + +S E + +KL ADA F++V +L
Sbjct: 144 DSKERLSFINSLNFDWEMVSEEEKRSKLDKL-------------ADA-----NFDKVCDL 185
Query: 185 VAGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVE 244
V R+V++ KG AYV + +SL+ +F S L K+L LT R R E DRL PI+
Sbjct: 186 VEKRKVFLEKGKAYVPASEQISLIAEEFSSRLEKSLELTARILP---RLDEDDRLLPILN 242
Query: 245 ALSMSYLGPDYSQT-KEFGEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLG 303
LS+ + P+Y+ T G IS +D L + FP+C R+L LR+D HL+H GR+Q G
Sbjct: 243 HLSLGFTVPEYTSTIAGIGNISALQIDSLIKH-FPMCQRNLHLNLRKDKHLRHFGRLQYG 301
Query: 304 LFLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQKII 363
LFLKG+GL +E+AL FW+ FS + ERF+KEY Y++RH+YG EG R +Y PYSCQ+I+
Sbjct: 302 LFLKGIGLDVEEALVFWRKSFSN-MSDERFNKEYRYNVRHSYGLEGNRKNYKPYSCQQIL 360
Query: 364 SS-TPGVGDHHGCPYRHFSEENLRAALGRMGV-GSRAMEDVVDKVRNRHYQLACTLTFEA 421
+ PG GD HGCP+RHFS ENL A+L MG+ + ++++ D V RHY +ACT FE
Sbjct: 361 TGPQPGTGDSHGCPFRHFSIENLNASLENMGIHDPKILKEINDAVIERHYHIACTKVFEF 420
Query: 422 VHSSSCDAGINHPNQYFSDSHKILQPKNNNA 452
H S N+ ++ ++I++ N N
Sbjct: 421 THPSVGIFTRNYALIKNTNKNEIMEIDNKNT 451
>gi|157107035|ref|XP_001649593.1| DNA primase large subunit [Aedes aegypti]
gi|108879656|gb|EAT43881.1| AAEL004698-PA [Aedes aegypti]
Length = 561
Score = 295 bits (754), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 163/455 (35%), Positives = 254/455 (55%), Gaps = 29/455 (6%)
Query: 20 TLPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKR---PEEMENLVRDLWKANM 76
+ LY P +++ + + ++ A++RL+VL+ + A + + E E++ ++ A +
Sbjct: 28 NVALYAIPPMVDLSITELQLLALERLKVLRILEQATNKNLKLSSDEGRESVFNEMNHAGL 87
Query: 77 RH--------PEASEDV---NKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGS 125
+H +D+ KD +SHF+LR YC TE+LR+WF++ E L+R +F S
Sbjct: 88 KHYVRLCQGNHSKEQDIAARKKDYLSHFILRFAYCSTEELRRWFITREMELFRLKFAGLS 147
Query: 126 SEAKRALMEEFDLPCKAISRTEFENAKEKLEQVARSFDQPLPTADAIFYKVPFEEVPELV 185
++ + + ++++ ++ + K+ L + + + FYKV F EV +LV
Sbjct: 148 AQDVKDFVLKYEMGYSPLTPDQKNEIKDGLYD-STLYHSIVQIESMDFYKVRFTEVLDLV 206
Query: 186 AGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERD-RLTPIVE 244
R+ Y+ G AYV VS++ + + L L R + E E D R T I++
Sbjct: 207 RSRKCYLRTGFAYVGASDFVSIIANKHQQLLEDGLQAHLR----LLPEIENDERFTMILK 262
Query: 245 ALSMSYLGPDYSQTKEFGEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGL 304
L SY G DY +K G++ I+ LDQL++ SFPLCMR+ D LR HHLKHGGRMQ GL
Sbjct: 263 ELHTSYTGKDYRVSKS-GQVPIESLDQLSKKSFPLCMRYCHDTLRSKHHLKHGGRMQYGL 321
Query: 305 FLKGVGLRMEDALAFWKAEFSQ-KVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQKII 363
FLK +G+ MED+L FW+ EF++ V E+F+KEYAY+IRHNYGKEG R +Y Y+C KII
Sbjct: 322 FLKAIGVTMEDSLRFWREEFTRGTVTLEKFEKEYAYNIRHNYGKEGSRVNYAAYNCMKII 381
Query: 364 SSTPGVGDHHGCPYRHFSEENLRAALGRMGVGSRAMEDVVDKVRNRHYQLACTLTFEAVH 423
+++ D HGCP++++ L+ L G+ + E++ HYQ+AC FE H
Sbjct: 382 TASVTPQDTHGCPFKNWEPSVLKTKLSSFGLSAAHAEEISGFASRGHYQIACGKYFEISH 441
Query: 424 SSSCDAGINHPNQYFSDSHKI-------LQPKNNN 451
+ D GI HPNQYF S ++P+N N
Sbjct: 442 DTKLDEGITHPNQYFDLSQITVGARAPKVKPQNQN 476
>gi|145352199|ref|XP_001420442.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580676|gb|ABO98735.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 488
Score = 294 bits (752), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 174/457 (38%), Positives = 256/457 (56%), Gaps = 28/457 (6%)
Query: 17 SVSTLPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEEMENLVRDLWKA-N 75
+ + L Y AP E +E E AMDR VL+ I DA + GK+ EE++ + + N
Sbjct: 28 NAARLDAYNTAPDDERSIEYLERAAMDRYGVLRAIDDARSGGKKDEELKRAIASAEEEYN 87
Query: 76 MRHPEA----SEDVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKRA 131
MR +E +D SHF+LRL CR+E+ R+WF E L++YR+ S +AK
Sbjct: 88 MRRTTGGTFDAEGAARDATSHFLLRLASCRSEEHRRWFRENELELFKYRYGELSLDAKME 147
Query: 132 LMEE--FDLPCKAISRTEFENAKEKLEQVARSFDQPLPTADAIFYKVPFEEVPELVAGRR 189
M F+ +A S E ++ L R ++ A F V FEEV LV RR
Sbjct: 148 FMRTNGFNDYARA-SEKEVRERRDDLRDYQRMCEEAASEASRWFV-VGFEEVCPLVKSRR 205
Query: 190 VYIHKGHAYVAMHQVVSLVVTQFRSNLSK----ALILTNRKWTSTIREQERDRLTPIVEA 245
Y+ G+A++ + LV +F++ L+K A+ L N+ ++E RLTP++++
Sbjct: 206 AYLIGGNAWIRKETLDQLVFGRFKTMLNKMVAEAITLFNK-----FEKKEAHRLTPLLKS 260
Query: 246 LSMSYLGPDYSQTKEFGEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLF 305
+ G Y E G +SI + + + SFPLCMR L+ L++DHHL HGGR QL L+
Sbjct: 261 VHNRRSGSGYDFQGEDGTMSIAGI-EATQESFPLCMRQLYKALKKDHHLTHGGRRQLQLY 319
Query: 306 LKGVGLRMEDALAFWKAEFSQ--KVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQKII 363
LKG+GL ++ AL FWK EF++ K AE+F+K+YAY IRH YGKEGKR +YTP++C + I
Sbjct: 320 LKGIGLPLDQALVFWKTEFTKHPKCSAEKFEKDYAYGIRHAYGKEGKRVNYTPHACGQCI 379
Query: 364 SSTPGVGDHHGCPYRHFSE------ENLRAALGRMGVGSRAMEDVVDKVRNRHYQLACTL 417
++ PGV D HGCP++ + L LG + + +V+K N HYQ+AC +
Sbjct: 380 AADPGVKDAHGCPFKTLTSGVKDNGARLHELLGTLKISGAKSHAIVEKATNMHYQIACGM 439
Query: 418 TFEAVHSS-SCDAGINHPNQYFSDSHKILQPKNNNAA 453
TF A+H +AG++ P+QYF +S KIL P + A
Sbjct: 440 TFAAIHDGVEIEAGVHTPHQYFHESRKILAPPTASEA 476
>gi|324505341|gb|ADY42297.1| DNA primase large subunit [Ascaris suum]
Length = 516
Score = 293 bits (751), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 172/443 (38%), Positives = 256/443 (57%), Gaps = 24/443 (5%)
Query: 19 STLPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKR-PEEMEN-LVRDLWK--- 73
+ L +Y P ++ + +FE A++RL+VL+ + R R EEM + L ++L K
Sbjct: 32 TNLQMYLEPPVDDISILEFEEMAINRLKVLRVVEQLKERFPRNTEEMNDALSKELMKLMP 91
Query: 74 --ANMRHPEA-SEDVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSE--- 127
NM + +++ +DIISHF+LRL +C+T + KWF+ E L++YRF + S
Sbjct: 92 IACNMCPADKLADERRRDIISHFILRLAFCKTTEQTKWFIQQEIDLFKYRFHMESKNRSN 151
Query: 128 -AKRALMEEFDLPCKAISRTEFENAKEKLEQVARSFDQPLPTADAIFYKVPFEEVPELVA 186
A+ F++ A+++ E ++ E++ + Q + AD +KVPF + +LV
Sbjct: 152 IARFLATSHFNM--TALTQVEKDDLAEEIGNASGVPMQKVRCADV--WKVPFVDALDLVR 207
Query: 187 GRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEAL 246
RRV++H G AYV+ +V +V T+FR +S ++ K+ I E+ R L P++ L
Sbjct: 208 KRRVFLHAGFAYVSRDDLVIIVCTKFRMIMSSSMARAC-KYIGFIEEEHR--LMPLLLKL 264
Query: 247 S-MSYLGPDYSQTKEFGEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLF 305
+ +Y+G DY+ I+ + + L SFPLCMR + +L DHHL+HG RMQ GLF
Sbjct: 265 TNKAYIGKDYAGKDAAKHITPEMIHLLCTKSFPLCMRQIHHRLCADHHLRHGARMQYGLF 324
Query: 306 LKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQKII-S 364
LKG+GL +EDALAFW+AEF++K+ A+RFDK+YAY+IRHNYGKEG+R DY Y C KII
Sbjct: 325 LKGIGLTLEDALAFWRAEFTKKIDADRFDKQYAYNIRHNYGKEGRRVDYKAYPCSKIILG 384
Query: 365 STPGVGDHHGCPYRHFSEENLRAALGRMGVGSRAMEDVVDKVRNRHYQLACTLTFEAVHS 424
S P D HGCPYRH L L +G+ + +V+ + Y ACT FE H
Sbjct: 385 SAPSAQDCHGCPYRHSDPTVLAQKLEGVGLSKEHIATIVNLSKTAQYDRACTRYFEFTHK 444
Query: 425 ---SSCDAGINHPNQYFSDSHKI 444
+S I HPNQYF S ++
Sbjct: 445 MAENSLGVLITHPNQYFELSTQL 467
>gi|328771695|gb|EGF81734.1| hypothetical protein BATDEDRAFT_2792, partial [Batrachochytrium
dendrobatidis JAM81]
Length = 414
Score = 293 bits (750), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 167/418 (39%), Positives = 239/418 (57%), Gaps = 30/418 (7%)
Query: 20 TLPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEEME-------------N 66
TL +Y P+ E+ L +FE +A+DRLRVL+ I A R K ++ +
Sbjct: 4 TLNMYSTPPKDELSLYEFETYALDRLRVLRAIETAHLRFKHIGDVAAVKYIDPVLTSHLD 63
Query: 67 LVRDLWKANMRHPEASEDVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSS 126
L R+ + E KD ISHF+LR+ YCRTEDLR+WF+ E AL++YRF +
Sbjct: 64 LKRNTLLNTVGPSVLYEQRRKDHISHFILRMAYCRTEDLRQWFIKQEMALFKYRFGIEQQ 123
Query: 127 EAKRALMEEFDLPCKAISRTEFENAKEKLEQV--ARSFDQPLPTADAIFYKVPFEEVPEL 184
+ A + +L A+S + N + +L + RS FY+V FE+V EL
Sbjct: 124 VDRDAFIHLSNLDFTAVSFEDMCNMQAQLADIDTIRSL---------TFYRVSFEQVCEL 174
Query: 185 VAGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVE 244
V R V + +G AYV H+ LVV F+ L+ LI + R E DRL PI+
Sbjct: 175 VGKRSVLLIQGMAYVPEHERSVLVVNAFKDQLTAHLIAAAKALP---RLDEDDRLVPILN 231
Query: 245 ALSMSYLGPDYSQTKEFG-EISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLG 303
+L+ YL +Y+ + + ++ +D+D LA FP CM+ L L++ HLKH GR+QLG
Sbjct: 232 SLAKQYLSNEYTPSGKVSKDVGHEDIDGLA-VHFPPCMQSLHSSLKQTSHLKHQGRLQLG 290
Query: 304 LFLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQKII 363
LFLKG+GL + +AL FW+ F + E K Y Y++R+NYG+EGKRT+YTPYSC KII
Sbjct: 291 LFLKGIGLSLGEALIFWRKSFHRMSDDEFSKKGYLYNVRYNYGQEGKRTNYTPYSCVKII 350
Query: 364 S-STPGVGDHHGCPYRHFSEENLRAALGRMGVGSRAMEDVVDKVRNRHYQLACTLTFE 420
+ + PG GD HGCP+RHFS+E+L + R+ V ++V+ +N HYQ+ACT FE
Sbjct: 351 TGAQPGAGDAHGCPFRHFSQESLGTMMQRLKVDGANAQEVLQTAKNGHYQIACTKLFE 408
>gi|242021790|ref|XP_002431326.1| DNA primase large subunit, putative [Pediculus humanus corporis]
gi|212516594|gb|EEB18588.1| DNA primase large subunit, putative [Pediculus humanus corporis]
Length = 502
Score = 293 bits (750), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 162/445 (36%), Positives = 257/445 (57%), Gaps = 33/445 (7%)
Query: 21 LPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDA---LARGKRPEEMENLVRDLWKANMR 77
L +Y P V +++ A++R+++ + A L G +E+ + ++ K ++
Sbjct: 26 LTMYLEPPDERVPVDEIREMAVERVKLFRAFEVASVKLGNGFNFKELA--IDEMNKQGLK 83
Query: 78 H----------PEASEDVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFL-LGSS 126
+ PEA +D +SH++LR+ YCRTE+LRKWF+S E +R +F + +
Sbjct: 84 YFMPLVKGYSDPEARR---RDYLSHYMLRICYCRTEELRKWFVSREMEFFRLKFFNIENK 140
Query: 127 EAKRALMEEFDLPCKAISRTEFENAKEKLE-QVARSFDQPLPTADAIFYKVPFEEVPELV 185
E M++ L +IS E K+ L Q+ S + + YKV F +V +L+
Sbjct: 141 EDITLFMKKNGLNYTSISDEE----KQSLSTQLINSSIRHINLDAVNIYKVHFSQVFDLI 196
Query: 186 AGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKAL--ILTNRKWTSTIREQERDRLTPIV 243
R+V++ G+AY+ + S++ + F+ NL + L I N +I E ++ R++ IV
Sbjct: 197 KKRKVFLKLGNAYIPQTDLHSVISSVFKKNLIEELEDICKNL----SIYESDQ-RVSAIV 251
Query: 244 EALSMSYLGPDYSQTKEFGEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLG 303
L Y G DY + E EI+I++LD L+ S+PLCM+ + D + HHL+H R+Q G
Sbjct: 252 RGLHNCYTGKDYCKNTEKTEIAIENLDALSMKSYPLCMKAMHDTFKTTHHLRHSARLQYG 311
Query: 304 LFLKGVGLRMEDALAFWKAEFSQK--VGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQK 361
LFLKG+G+ + D+L FWK F+QK + E F+K YAYSIRHNYG EGKR +YTP++C K
Sbjct: 312 LFLKGIGVSLTDSLKFWKMGFTQKPDINNEVFEKRYAYSIRHNYGSEGKRANYTPHNCLK 371
Query: 362 IISSTPGVGDHHGCPYRHFSEENLRAALGRMGVGSRAMEDVVDKVRNRHYQLACTLTFEA 421
II++ G G++HGCP++H+ ++L+ L + G+ + + ++ D HYQLACT FE
Sbjct: 372 IINTPVGPGENHGCPFKHYDSDSLKKMLLKSGISTSDILNITDYATKGHYQLACTRYFEV 431
Query: 422 VHSSSCDAGINHPNQYFSDSHKILQ 446
H+ + GINHPNQYF DS +L
Sbjct: 432 THNITNANGINHPNQYFEDSQNLLN 456
>gi|5679048|gb|AAD46835.1|AF160895_1 GM13640p [Drosophila melanogaster]
Length = 533
Score = 293 bits (750), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 165/452 (36%), Positives = 265/452 (58%), Gaps = 28/452 (6%)
Query: 23 LYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKR--PEEMENLVR-DLWKANMR-- 77
LY Y P +V +++FE A++RLR+L+ + A R R +E + +V DL + +R
Sbjct: 30 LYHYPPTEDVHIDEFEELALERLRLLRVLDRASTRNLRVLSDEWKEIVSADLTREGLRSY 89
Query: 78 -----------HPEASEDVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSS 126
H + +D +SHF+LRL YCR+EDL +WF++ E L+R++F S
Sbjct: 90 LRLCSTGGSAKHEADIQTRRRDYLSHFILRLAYCRSEDLARWFVAREMELFRFKFAALSG 149
Query: 127 EAKRALMEEFDLPCKAISRTEFENAKEKLEQVARSFDQPLPTADAI-FYKVPFEEVPELV 185
+ +E ++ + + K+ L + + Q + + + FYKVPF +V +LV
Sbjct: 150 FEVKQFLEANGFEIHPLTEAQKDEVKDGLYE--STVGQSVAKIELLDFYKVPFTQVLDLV 207
Query: 186 AGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERD-RLTPIVE 244
GRR ++ G+AYV H +VSLV T+ + + + L + + + + E D R++ ++
Sbjct: 208 RGRRCFLKAGYAYVNTHDLVSLVGTKQQDEIEQGL----QAAKTMVEDVEADERISRTLK 263
Query: 245 ALSMSYLGPDYSQTKEFGEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGL 304
AL SY G DY+ ++ + I+ LDQL+++S PLCMR + +R +HH+KH GRMQ GL
Sbjct: 264 ALHNSYTGRDYTVCRD-AAVPIESLDQLSKTSMPLCMRMCHEHIRANHHIKHSGRMQYGL 322
Query: 305 FLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQKIIS 364
FLKG+G+ +ED+L FW+ EF++K+ A++F + Y Y+I HNYGK+G +YTPYSC KII
Sbjct: 323 FLKGIGVALEDSLRFWREEFTKKMDADKFTRSYEYNIYHNYGKKGSMVNYTPYSCAKIIK 382
Query: 365 STPGVGDHHGCPYRHFSEENLRAALGRMGVGSRAMEDVVDKVRNRHYQLACTLTFEAVHS 424
G GD HGCPY++ + +L+ L G+ + A+++V+ V HYQ+ C F+ H+
Sbjct: 383 DVAGPGDCHGCPYKNMDQGSLKTKLSSYGLSASAIDEVMFFVSRGHYQIGCGKYFQLTHN 442
Query: 425 SSCDAGINHPNQYFSDSHKIL---QPKNNNAA 453
S + INHPN YF +S + Q + N +A
Sbjct: 443 SPVEPSINHPNNYFEESQIAMGNRQKRANGSA 474
>gi|323450419|gb|EGB06300.1| hypothetical protein AURANDRAFT_29345 [Aureococcus anophagefferens]
Length = 484
Score = 293 bits (749), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 172/474 (36%), Positives = 269/474 (56%), Gaps = 34/474 (7%)
Query: 3 IVRSQRSRTNTPNDSVST-----LPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALAR 57
++ S R + TP + LY PQ E+ L++FE++A+DRL++L+ I +
Sbjct: 1 MIVSNRRQQATPRTPAVVSRHVLVSLYERPPQTELTLDEFEIYAVDRLKILRTIDALKQK 60
Query: 58 GKRPEEMEN-----LVRDL-WKANMRHPEASEDVNKDIISHFVLRLVYCRTEDLRKWFLS 111
G +P E+E L + L + + H +A E KD +SHF+LRL Y RTE++R+WFL+
Sbjct: 61 GFKPRELEAELAPVLAQALPLRGSAEHVKADE--RKDQVSHFILRLGYSRTEEMRRWFLT 118
Query: 112 METALYRYRFLLGSSEAKRALMEEFDLPCKAISRTEFENAKEKLEQVARSFDQPLPTADA 171
E AL+++R S + L + +S + + L +++++ D A
Sbjct: 119 QECALFKHRLGTLSGPQLGLFLAANGLKFEEVSDADVDARSVALSKISKTGD----GGAA 174
Query: 172 IFYKVPFEEVPELVAGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTI 231
+Y+VPF E +L+ R VY+ KG+AYV ++ ++VV +FRS LS++L + +
Sbjct: 175 GYYRVPFVEAIDLIGRREVYLEKGYAYVPAAKLHAIVVARFRSALSRSLAKASSSLAAAA 234
Query: 232 REQERDRLTPIVEALSMSYL--GPDYSQTKEFGEISIKDLDQLARSSFPLCMRHLFDKLR 289
+ RL+P++ + L G D G I + +D LA+ S PLCM+ L L+
Sbjct: 235 GDP---RLSPLLNNIEKHDLSNGKDLEDDDVEG-IHPEQIDALAKQSMPLCMQQLHGALK 290
Query: 290 EDHHLKHGGRMQLGLFLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEG 349
DH LKH GR Q GLFLK GL MED L F++AEF++ + + F KEYAY+IRH YGKEG
Sbjct: 291 RDHKLKHWGRQQYGLFLKAAGLSMEDQLRFFQAEFTKIMTVDAFSKEYAYNIRHRYGKEG 350
Query: 350 KRTDYTPYSCQKII-SSTPGVGDHHGCPYRHFSEENLRAALGRMGVGSRAMEDVVDKVRN 408
KRT+Y+PY C K+I PG G++HGCPY+H+ +++L + LG M + + + ++ + ++
Sbjct: 351 KRTEYSPYGCYKLIMDMAPGPGEYHGCPYKHYDDDHLASILGAMDISRESSQAILGQAKS 410
Query: 409 RHYQLACTLTFEAVHSSSC------DAGINHPNQYFSDS---HK-ILQPKNNNA 452
++YQLAC FE H + D NHPN +F S HK + + KN +A
Sbjct: 411 KNYQLACQKHFEVTHPKAAGVAARPDGVGNHPNAWFKASRIYHKEVHEAKNPDA 464
>gi|393245426|gb|EJD52936.1| DNA primase, large subunit [Auricularia delicata TFB-10046 SS5]
Length = 503
Score = 293 bits (749), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 171/461 (37%), Positives = 257/461 (55%), Gaps = 37/461 (8%)
Query: 21 LPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEEM----ENLVRDLWKANM 76
L Y PQ E+ LEDFE A+DR+RVL I +LAR + +E+ +N + +
Sbjct: 26 LNFYDVPPQYEITLEDFESAAIDRIRVLSTIESSLARNREWQELKTDVDNACKKYLPLDF 85
Query: 77 RHPEASEDVN----KDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKR-- 130
+ S DV+ +D +SHFVLRL +CR+ DLR+ F+ ET L+R+RF +++A +
Sbjct: 86 NYSAKSLDVDHQRRRDHLSHFVLRLAFCRSPDLRQRFIKAETTLFRFRFEEAAAKATKDL 145
Query: 131 -ALMEEFDLPCKAISRTEFENAKEKL-----EQVARSFDQPLPTADAIFYKVPFEEVPEL 184
A +E + + E + + + A + P+ FY+V + + P+L
Sbjct: 146 AAFLESQRFNWEKVPPNELQALRADVLAAHGNSKALTDKWPVAGPPPAFYRVDWTKAPDL 205
Query: 185 VAGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVE 244
V R+VY+ YV + +S+V+ F S L KALI T + R E DR+ P++E
Sbjct: 206 VLNRKVYMRNKKVYVPEIEQLSIVMEDFTSRLEKALIQTA---MALPRLDEDDRIMPVLE 262
Query: 245 ALSMSYL-GPDYSQTKEFGE-----ISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGG 298
LS S + G T E I+ +++LA+ FP+CMR+L D LR+ HLKH G
Sbjct: 263 HLSESMISGIPSDNTFSLAEADGTTITADMINELAQKHFPMCMRNLHDNLRKARHLKHTG 322
Query: 299 RMQLGLFLKGVGLRMEDALAFWKAEF-SQKVGAERFDKEYAYSIRHNYGKEGKRTDYTPY 357
R+Q GLFLKG+G+ +E+A+ FW+ F + ++F+KEY Y+IRH YG+EGKR +Y P
Sbjct: 323 RLQYGLFLKGLGMELEEAILFWRKSFRGGPIQEDKFNKEYKYNIRHQYGQEGKRANYPPM 382
Query: 358 SCQKIISST-PGVGDHHGCPYRHFSEENLRAAL----GRMGVGSRAMEDVVDKVRNRHYQ 412
+CQ+II+S PG + HGCP++HFS ENL AL G G+ S A+ D+ V+ +H+
Sbjct: 383 NCQRIITSAPPGPQEAHGCPFKHFSLENLDTALMANYGGCGMTSGAIADINHYVKEKHFH 442
Query: 413 LACTLTFEAVHSSSCDAG------INHPNQYFSDSHKILQP 447
LACT FE H G + HPN+Y + S ++ P
Sbjct: 443 LACTRVFEVTHGIPAGEGLGSKESVTHPNRYAARSRELAAP 483
>gi|195427613|ref|XP_002061871.1| GK19278 [Drosophila willistoni]
gi|194157956|gb|EDW72857.1| GK19278 [Drosophila willistoni]
Length = 540
Score = 292 bits (747), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 164/451 (36%), Positives = 254/451 (56%), Gaps = 41/451 (9%)
Query: 23 LYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEEMENLVRDLWK--------- 73
+Y Y P ++++E+FE A++RLR+L+ A A+G R L+ D WK
Sbjct: 30 IYNYPPIDDIQIEEFEDLALERLRLLRIFDHAGAKGLR------LLSDDWKEYVNAELSR 83
Query: 74 --------------ANMRHPEASEDVN---KDIISHFVLRLVYCRTEDLRKWFLSMETAL 116
AN + D+ +D +SHF+LRL YCR+EDL +WF+ E
Sbjct: 84 EGLRNYLRLCTTSGANATGAKHEADIQTRRRDYLSHFILRLAYCRSEDLTRWFIGREMEY 143
Query: 117 YRYRFLLGSSEAKRALMEEFDLPCKAISRTEFENAKEKL-EQVARSFDQPLPTADAIFYK 175
++Y+F S + +E + + ++ ++ + K+ L E A + D FYK
Sbjct: 144 FKYKFSALSGPEIKQFLEANNFHFQPLTESQKDEIKDGLYESTAGQSVTKIELLD--FYK 201
Query: 176 VPFEEVPELVAGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQE 235
VPF +V +LV GRR Y++ G+AYV H +VS+V T+ + + + L + I + E
Sbjct: 202 VPFTQVLDLVRGRRCYLNAGYAYVNTHDLVSIVGTKQQDEIEQGL----QAAKLLIDDVE 257
Query: 236 RD-RLTPIVEALSMSYLGPDYSQTKEFGEISIKDLDQLARSSFPLCMRHLFDKLREDHHL 294
D R+ +++AL SY G DY+ ++E + I+ LDQL+++S PLCMR + +R HH+
Sbjct: 258 ADERIARMLKALHTSYTGKDYTVSREIA-VPIESLDQLSKTSMPLCMRVCHEHIRTQHHI 316
Query: 295 KHGGRMQLGLFLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTDY 354
KHGGRMQ GLFLKG+G+ +ED++ FW+ EFS+K+ ++F + Y Y+I HNYGK+G +Y
Sbjct: 317 KHGGRMQYGLFLKGIGVTLEDSIRFWRDEFSKKMDVDKFTRSYEYNIHHNYGKKGSMVNY 376
Query: 355 TPYSCQKIISSTPGVGDHHGCPYRHFSEENLRAALGRMGVGSRAMEDVVDKVRNRHYQLA 414
+PYSC KII GD HGCPY+ + L++ L + A E+++ V HYQ A
Sbjct: 377 SPYSCLKIIKEMAAPGDCHGCPYKALDQTTLKSKLTSYSLSPSACEEIMYFVSRGHYQFA 436
Query: 415 CTLTFEAVHSSSCDAGINHPNQYFSDSHKIL 445
C F H+S + INHPN YF +S ++
Sbjct: 437 CGKYFMLTHNSQTEVAINHPNTYFEESQNLM 467
>gi|170593979|ref|XP_001901741.1| Eukaryotic-type DNA primase, large subunit family protein [Brugia
malayi]
gi|158590685|gb|EDP29300.1| Eukaryotic-type DNA primase, large subunit family protein [Brugia
malayi]
Length = 489
Score = 291 bits (746), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 166/442 (37%), Positives = 248/442 (56%), Gaps = 25/442 (5%)
Query: 20 TLPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEEMENLVRDLWKANMRH- 78
L +Y +P + L +F+ A++RLRVLK + + + P E E + +L K M+
Sbjct: 5 NLHMYLESPMENITLLEFQELALNRLRVLKAVEQV--KDRFPRETEAINNELAKQLMKLM 62
Query: 79 ---------PEASEDVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSS--E 127
E +DIISHF+LRL +C+T + KWF+ E L+++RF L S +
Sbjct: 63 PIACGCCPLEELENARRRDIISHFILRLAFCQTPEQTKWFIQQEVDLFKFRFQLVSKSYD 122
Query: 128 AKRALMEEFDLPCKAISRTEFENAKEKLEQVARSFDQPLPTADAIFYKVPFEEVPELVAG 187
++ + + ++ E EN KE L F F+KVPF++ +LV
Sbjct: 123 VVTQFLQANNFDAELVTDAEKENLKENLSNAC--FIPISKITGTNFWKVPFDDALDLVRK 180
Query: 188 RRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEALS 247
RRV + G+A+V+ + ++ T+ R N++ A+ R + + +E DRL P ++ LS
Sbjct: 181 RRVLLVFGYAFVSEDDLQVILCTRLRLNIAAAMA---RACRNIVYIEENDRLMPFLKKLS 237
Query: 248 M-SYLGPDYSQTKEFGEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFL 306
SY+G +Y + ++ +D LA SSFPLCMR++ ++LR DHHL+HG RMQ GLFL
Sbjct: 238 SRSYVGKNYIGL-DASRVTPDMVDSLAASSFPLCMRNIHNRLRVDHHLRHGARMQYGLFL 296
Query: 307 KGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQKII-SS 365
K VG+ +EDAL FW++EF++K+ +++FDK+YAY+IRHNYGKEGK DY+ Y C KII
Sbjct: 297 KAVGMTLEDALNFWRSEFTKKMDSDKFDKQYAYNIRHNYGKEGKHADYSAYPCAKIILDF 356
Query: 366 TPGVGDHHGCPYRHFSEENLRAALGRMGVGSRAMEDVVDKVRNRHYQLACTLTFEAVHS- 424
+P D HGCPYRH L L G+ +E + +N+ Y ACT FE H
Sbjct: 357 SPSSADCHGCPYRHSDLRLLTQNLESSGLSKSQIEHITLLSKNKQYDKACTRYFEFTHKM 416
Query: 425 --SSCDAGINHPNQYFSDSHKI 444
+S I HPNQYF S ++
Sbjct: 417 AENSLGTVITHPNQYFELSRQV 438
>gi|219121353|ref|XP_002185902.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|209582751|gb|ACI65372.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 463
Score = 291 bits (744), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 164/431 (38%), Positives = 247/431 (57%), Gaps = 25/431 (5%)
Query: 23 LYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEEMENLVRDLWKANMRHPEAS 82
LYR +P++E+ ++DFEV+A+ RL+VL+ I E+ + + K + P
Sbjct: 26 LYRESPRVEMTIDDFEVYALKRLKVLRKIEQLKTMRVSAEQFNGKIAKMVKQELSDPSVD 85
Query: 83 EDVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKRALMEEFDLPCKA 142
E SHF+LRL YC+T+DLR+WFL ET L+++R S+E ++E+ K
Sbjct: 86 E------ASHFILRLSYCQTDDLRRWFLQQETTLFQHRLSHLSTEQLAKSVKEY-AQIKP 138
Query: 143 ISRTEFENAKEKLEQVARSFDQPLPTADAIFYKVPFEEVPELVAGRRVYIHKGHAYVAMH 202
I R E KE+L+ P+ A + FY VPF++ +LVA R+ Y+ +G+AY+
Sbjct: 139 IPRAE----KERLQSHLMQLMNPVEFAKSHFYAVPFQQALDLVAQRQCYLSQGNAYIPQA 194
Query: 203 QVVSLVVTQFRSNLSKALIL-TNRKWTSTIREQERDRLTPIVEALSMSYLGPDYSQTKEF 261
+V+S++V +FRS LS+ L+L N + + E R+ P+++ L+ + + S +
Sbjct: 195 KVLSILVAKFRSELSRCLVLMANTNTFRNVEDPEAVRIYPLLQNLNSCLVNEEPSGEQGL 254
Query: 262 ---GEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALA 318
++ ++D++A PLCMR L L++D L+H GR+Q GLFLK GL MEDAL
Sbjct: 255 TGSTGLTAANVDRMA-PHMPLCMRQLQAGLQQDKKLRHWGRLQYGLFLKFAGLSMEDALT 313
Query: 319 FWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQKII-SSTPGVGDHHGCPY 377
F++ F+ G E+F K+YAY+IRH YGKEGKR YT Y+C KII + P GDHHGCPY
Sbjct: 314 FFQRHFTSVTG-EQFQKQYAYNIRHMYGKEGKRATYTAYNCSKIIMGNAPSTGDHHGCPY 372
Query: 378 RHFSEENLRAALGRMGVGSRAMEDVVDKVRNRH-YQLACTLTFEAVHSS------SCDAG 430
+HF +++L L R+ +G+ + ++ H YQLAC FE H S D
Sbjct: 373 KHFDDQHLEQTLQRLKIGTDGDRRAIMALKKSHQYQLACQKHFEVSHEKANSMEVSVDNV 432
Query: 431 INHPNQYFSDS 441
NHPN +F S
Sbjct: 433 GNHPNAWFRAS 443
>gi|195019633|ref|XP_001985024.1| GH16826 [Drosophila grimshawi]
gi|193898506|gb|EDV97372.1| GH16826 [Drosophila grimshawi]
Length = 533
Score = 290 bits (742), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 162/448 (36%), Positives = 256/448 (57%), Gaps = 25/448 (5%)
Query: 23 LYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRP-----EEMEN--LVRDLWKAN 75
LY Y P +V +++FE A++RLR+L+ A +G R +E N + RD ++
Sbjct: 30 LYHYPPTEDVHIDEFEELALERLRLLRVFDRATTKGLRLLSDDWKEYVNAEMTRDGLRSY 89
Query: 76 MRHPEASEDVN---------KDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSS 126
MR + +D +SHF+LRL YCR+EDL +WF++ E ++Y+F S+
Sbjct: 90 MRMGTSGSSTKQESDLQVRRRDYLSHFILRLAYCRSEDLLRWFVAREMEFFKYKFAALST 149
Query: 127 EAKRALMEEFDLPCKAISRTEFENAKEKLEQVARSFDQPLPTADAI-FYKVPFEEVPELV 185
+ ++ D ++ + + K+ L + + Q + + + FYKVPF +V +LV
Sbjct: 150 AEIKQFLQANDFHIHPLTEEQKDEVKDGLYE--STVGQSVSKIELLEFYKVPFTQVLDLV 207
Query: 186 AGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERD-RLTPIVE 244
RR Y+ G AYV H +VS+V + + + + + S I + E D R++ +++
Sbjct: 208 RSRRCYLKAGFAYVNTHDLVSIVGARQLDEIERGM----QAAKSFIADVEADERISRMIK 263
Query: 245 ALSMSYLGPDYSQTKEFGEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGL 304
+L SY G DY+ ++ + I+ LDQL+++S PLCMR D +R HH+KHGGRMQ GL
Sbjct: 264 SLHNSYTGKDYTVCRD-ASVPIESLDQLSKTSMPLCMRMCHDHIRSQHHIKHGGRMQYGL 322
Query: 305 FLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQKIIS 364
FLKG+G+ +ED+L FW+ EF++K+ ++F + Y Y+I+HNYGK+G +YTPYSC KII
Sbjct: 323 FLKGIGVTLEDSLRFWREEFTKKMDVDKFARSYEYNIQHNYGKKGSMVNYTPYSCLKIIK 382
Query: 365 STPGVGDHHGCPYRHFSEENLRAALGRMGVGSRAMEDVVDKVRNRHYQLACTLTFEAVHS 424
GD HGCPY+ + L+A L G+ +E+V+ V HYQ AC F H+
Sbjct: 383 EMAAPGDCHGCPYKTLDQPALKAKLSSFGLSPAGIEEVMFFVSRNHYQFACGKYFMLTHN 442
Query: 425 SSCDAGINHPNQYFSDSHKILQPKNNNA 452
S+ + INHPN YF +S ++ + A
Sbjct: 443 STLEPTINHPNSYFEESQILMGNRQKRA 470
>gi|350426516|ref|XP_003494461.1| PREDICTED: DNA primase large subunit-like [Bombus impatiens]
Length = 555
Score = 289 bits (740), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 167/448 (37%), Positives = 246/448 (54%), Gaps = 29/448 (6%)
Query: 21 LPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARG---KRPEEMENLVRDLWKANMR 77
L +Y + P+ EV L +FE A +RLR+L I + R E +NL L K ++
Sbjct: 26 LQMYDFPPRGEVLLTEFEQLAKERLRLLLHIENNANRTDFKTLEERKQNLNTALTKDGLK 85
Query: 78 H-----------PEASEDVN---KDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLL 123
+ D+ KD ISHF+LRL +C D + WF++ E ++ RF
Sbjct: 86 YYAHLLYAKGCKTPTETDLQYRRKDHISHFILRLSHCFEPDNQTWFINQEVEFFKLRFNS 145
Query: 124 GSSEAKRALMEEFDLPCKAISRTEFENAKEKLEQVARSFDQPLPTADAI-FYKVPFEEVP 182
E L+ + C+ I+ E K++L + S + D FYKVPF++V
Sbjct: 146 LDKEGVEKLLSMHKIDCQQITSEE----KDELREELGSSTAKVKNVDMTEFYKVPFQKVT 201
Query: 183 ELVAGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPI 242
+L+ RRVY+++G A++ +VSL V+ FR NL + R + ER I
Sbjct: 202 DLIRSRRVYLNQGIAFIPQTDLVSLFVSCFRKNLVDGMP-DARMSVGRVYGDER-----I 255
Query: 243 VEAL-SMSYLGPDYSQTKEFGEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQ 301
L S+ + + I LD+L+++S+PLCMR L + LR HHLK+ GR+Q
Sbjct: 256 ASCLKSVHNVSERTTVLWTSAATPIDKLDELSKTSYPLCMRVLHEALRTHHHLKNSGRIQ 315
Query: 302 LGLFLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQK 361
GLF+KG+G+ +EDAL+FWK EF++K+ +FDKEYAY+IRH YGKEGK+T+YTP C K
Sbjct: 316 YGLFIKGIGVTLEDALSFWKTEFTKKIDPGKFDKEYAYTIRHTYGKEGKQTNYTPLGCTK 375
Query: 362 IISSTPGVGDHHGCPYRHFSEENLRAALGRMGVGSRAMEDVVDKVRNRHYQLACTLTFEA 421
IISS G++HGCP++H + +LR L GV + ++ ++ D + ++Y ACT FE
Sbjct: 376 IISSAVSAGEYHGCPFKHMDQGSLRQKLFNYGVTAASINEITDLAKEQNYFGACTAYFEF 435
Query: 422 VHSSSCDAGINHPNQYFSDSHKILQPKN 449
+H D INHPN YF +S IL N
Sbjct: 436 IHDRLPDKPINHPNVYFMESRAILSKDN 463
>gi|402594907|gb|EJW88833.1| hypothetical protein WUBG_00256 [Wuchereria bancrofti]
Length = 477
Score = 289 bits (739), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 165/442 (37%), Positives = 247/442 (55%), Gaps = 25/442 (5%)
Query: 20 TLPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEEMENLVRDLWKANMRH- 78
L +Y P ++ L +F+ A++RL+VLK + + + P E E + +L K M+
Sbjct: 5 NLHMYLAPPVEDITLLEFQELALNRLKVLKAVEQV--KDRFPRETEAINNELAKQLMKLM 62
Query: 79 ---------PEASEDVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLL--GSSE 127
E +DIISHF+LRL +C+T + KWF+ E L+++RF L S +
Sbjct: 63 PIACGCCPLEELENARRRDIISHFILRLAFCQTPEQTKWFIQQEVDLFKFRFQLVSKSCD 122
Query: 128 AKRALMEEFDLPCKAISRTEFENAKEKLEQVARSFDQPLPTADAIFYKVPFEEVPELVAG 187
++ + + ++ E EN KE L F F+KVPF++ +LV
Sbjct: 123 VVTQFLQANNFDAELVTDAEKENLKENLSNAC--FIPLNKITSTNFWKVPFDDALDLVRK 180
Query: 188 RRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEALS 247
RRV + G+A+V+ + ++ T+ R N++ A+ R + + +E DRL P ++ LS
Sbjct: 181 RRVLLVFGYAFVSEDDLQVILCTRLRLNIAAAMA---RACRNIVYIEENDRLMPFLKKLS 237
Query: 248 M-SYLGPDYSQTKEFGEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFL 306
SY+G +Y + ++ +D LA SSFPLCMR++ ++LR DHHL+HG RMQ GLFL
Sbjct: 238 SRSYVGKNYIGL-DASRVTPDMVDSLAASSFPLCMRNIHNRLRVDHHLRHGARMQYGLFL 296
Query: 307 KGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQKIISS- 365
K VG+ +EDAL FW++EF++K+ +++FDK+YAY+IRHNYGKEGK DY+ Y C KII
Sbjct: 297 KAVGMTLEDALNFWRSEFTKKMDSDKFDKQYAYNIRHNYGKEGKHADYSAYPCAKIILDF 356
Query: 366 TPGVGDHHGCPYRHFSEENLRAALGRMGVGSRAMEDVVDKVRNRHYQLACTLTFEAVHS- 424
+P D HGCPYRH L L G+ +E + +N Y ACT FE H
Sbjct: 357 SPSSADCHGCPYRHSDLRLLAQNLESSGLPKSQIEHITLLSKNNQYDKACTRYFEFTHKM 416
Query: 425 --SSCDAGINHPNQYFSDSHKI 444
+S I HPNQYF S ++
Sbjct: 417 AENSLGTVITHPNQYFELSRQV 438
>gi|393220327|gb|EJD05813.1| DNA primase, large subunit [Fomitiporia mediterranea MF3/22]
Length = 489
Score = 288 bits (737), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 167/456 (36%), Positives = 254/456 (55%), Gaps = 37/456 (8%)
Query: 21 LPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEEMENLVRDLWKANM---- 76
L Y P ++ L++FE FA+DRLR+L I +L R + +E++ +V+ +
Sbjct: 24 LNFYDKPPFEDITLDEFETFAIDRLRILSEIEASLVRNRTYDELKAIVKAQQAKYLPLTA 83
Query: 77 ------RHPEASEDVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKR 130
R+ + KD ISHFVLRL +CR+E+LR+ F+ ET L+R R+ + SE ++
Sbjct: 84 TQEKLGRNKAVESERRKDHISHFVLRLAFCRSEELRRRFVKAETTLFRVRYEMDDSEDRK 143
Query: 131 ALMEEFDLPCKAISRTEFENAKEKLEQVARSFDQPLPTADAIFYKVPFEEVPELVAGRRV 190
++ + +S+ E E+ E + P + +YKV + VP LV RRV
Sbjct: 144 GFLDSREFGWLVLSKEE-----ERDEYLMNDLRIVSP-GETSWYKVRWTRVPNLVEKRRV 197
Query: 191 YIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEALSMSY 250
+ G AYV S+V +F + L AL T R + R E RL PI+E L +
Sbjct: 198 VLKGGWAYVPSKDQSSIVFQEFETRLEAALEQTAR---ALPRLDEDTRLMPILEHLGQGF 254
Query: 251 L-----GPDYSQTKEFG---EISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQL 302
L +Y+ G E+ + +D+LA +P+CMRHL D LR+D HLKH GR+Q
Sbjct: 255 LSGMSVASEYTSADSLGDGEEVKAEMIDELAEKHWPMCMRHLHDCLRKDRHLKHHGRLQY 314
Query: 303 GLFLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQKI 362
GLFLK VGL +E+A+ FW+ F ++ ++F+KEY Y+IRH+YG EGKRT+Y Y+CQ+I
Sbjct: 315 GLFLKVVGLSIEEAIVFWRKAFGGRITDDKFNKEYKYNIRHSYGLEGKRTNYPAYTCQRI 374
Query: 363 IS-STPGVGDHHGCPYRHFSEENLRAAL----GRMGVGSRAMEDVVDKVRNRHYQLACTL 417
I+ + PG + HGCPYRHFS + L+ AL G G+ + + +++ V+ HY +ACT
Sbjct: 375 ITQNQPGPQECHGCPYRHFSADRLQTALLATYGPQGLTAADLPEIMSVVKQEHYHVACTK 434
Query: 418 TFEAVHSSSCDAG-----INHPNQYFSDSHKILQPK 448
FE H G ++HPN+Y + S ++ + K
Sbjct: 435 VFEVTHGVPRGQGLDGESVSHPNKYAAKSRELEKAK 470
>gi|336367081|gb|EGN95426.1| hypothetical protein SERLA73DRAFT_94824 [Serpula lacrymans var.
lacrymans S7.3]
gi|336379804|gb|EGO20958.1| hypothetical protein SERLADRAFT_475443 [Serpula lacrymans var.
lacrymans S7.9]
Length = 507
Score = 288 bits (737), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 165/466 (35%), Positives = 260/466 (55%), Gaps = 38/466 (8%)
Query: 21 LPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEEMENLVRD-------LWK 73
L Y APQ +V LE+FE A+DRLRVL I ++AR + EE++++ L
Sbjct: 40 LNFYDKAPQFDVTLEEFEASALDRLRVLAEIESSIARNRTWEELKDMTTKQCRKYLCLDS 99
Query: 74 ANMRHPEASEDVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKRALM 133
R + + KD ISHFVLRL +CR+E+LR+ F+ ET L++ R+ L +E +R +
Sbjct: 100 NTARSIDWAAQRRKDHISHFVLRLAFCRSEELRRRFIKAETTLFKVRYELDDTEERRTFL 159
Query: 134 EEFDLPCKAISRTEFENAKEKLEQVARSFD-QPLPTA--------DAIFYKVPFEEVPEL 184
+ ++ +E ++ + + + + P+P ++YKV + +V EL
Sbjct: 160 SSLTFGWEEVNASEVKDVDKNFPEAEKLVNLVPVPPKYKDKPECYKGLYYKVKWTKVSEL 219
Query: 185 VAGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVE 244
V R+V++ G+AYV + + ++ +F + L+ L LT ++ R E RL PI++
Sbjct: 220 VEKRKVFLKGGYAYVPIWERDGIIFQEFETFLTGQLELTAKRLP---RLDEDTRLVPILD 276
Query: 245 ALSMSYLG---PDYSQTKEFG-EISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRM 300
LS +L +++ G EI + +D LA++ FP+CMR++ + L D HLKH GR+
Sbjct: 277 NLSQGFLAGVSTEWASAPASGDEIRAEMIDDLAKNHFPMCMRNIHESLMRDRHLKHFGRL 336
Query: 301 QLGLFLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQ 360
Q GLFLK +G+ +E+A+ FW+ FS + ++F+KEY Y+IRH+YG EGKR +Y SCQ
Sbjct: 337 QYGLFLKVLGVSIEEAIVFWRKSFS-GITDDKFNKEYKYNIRHSYGLEGKRANYPAKSCQ 395
Query: 361 KI-ISSTPGVGDHHGCPYRHFSEENLRAAL----GRMGVGSRAMEDVVDKVRNRHYQLAC 415
+I ++ PG D HGCPYRHF+ ENL +AL G+ S + ++ V+ HY +AC
Sbjct: 396 QILVADKPGPSDCHGCPYRHFAPENLESALLSSYASHGLSSTDLPAIMHNVKEGHYHVAC 455
Query: 416 TLTFEAVHSS---------SCDAGINHPNQYFSDSHKILQPKNNNA 452
T FE H+S I HPNQY + S ++ P +A
Sbjct: 456 TRVFEITHASKGVKKGEGVGGGESITHPNQYAARSRELSGPSEGDA 501
>gi|392595689|gb|EIW85012.1| DNA primase, large subunit [Coniophora puteana RWD-64-598 SS2]
Length = 494
Score = 288 bits (736), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 169/466 (36%), Positives = 251/466 (53%), Gaps = 44/466 (9%)
Query: 21 LPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEEMENLVR------DLWKA 74
L Y P +V +EDFE FA+DRLR+L I + AR + +E+ + DLW +
Sbjct: 32 LSFYDRPPLYDVTIEDFETFALDRLRILAEIEASYARNRSWDELRTVTEAQCKKYDLWLS 91
Query: 75 NMRHPEASEDV--NKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKRAL 132
+ D+ KD +SHFVLRL +CR+E+LR+ F+ ET L+R R+ ++
Sbjct: 92 SNTARSQFIDLERKKDHLSHFVLRLAFCRSEELRRRFVKAETTLFRVRYEKDDTKELTQF 151
Query: 133 MEEFDLPCKAISRTEFENAKEKLEQVARSFDQPLPTA------DAIFYKVPFEEVPELVA 186
+ D + + E + +L + LP D +FYKV + VP+LVA
Sbjct: 152 LSSQDFGWEKVDPPEKATYESELRAL-------LPNVGDKEFKDIVFYKVKWTRVPDLVA 204
Query: 187 GRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEAL 246
RRV++ +G A+V S+V F + L KAL R R E R+ PI+ L
Sbjct: 205 KRRVFLRRGQAFVPTTLQASIVFHAFETQLEKAL---ERTAKGLPRLDEDTRIVPILNNL 261
Query: 247 SMSYLGPDYSQTKEF-----GEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQ 301
S +L S+ GE+ + +D LA+ FP+CMR+L + L DHHLKH GR+Q
Sbjct: 262 SQGFLAGVPSEWTNATPTMDGELRAEMVDGLAKKHFPMCMRNLHESLMRDHHLKHFGRLQ 321
Query: 302 LGLFLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQK 361
GLFLK +GL +E+A+AFW+ FS + ++F+KEY Y+IRH+YG EGKR +Y SCQ+
Sbjct: 322 YGLFLKVLGLSIEEAVAFWRKSFSS-ITDDKFNKEYKYNIRHSYGLEGKRANYPAKSCQQ 380
Query: 362 I-ISSTPGVGDHHGCPYRHFSEENLRAAL----GRMGVGSRAMEDVVDKVRNRHYQLACT 416
I +S PG D HGCPYRHF+ +NL+ +L G+ S + +++ V+ HY +ACT
Sbjct: 381 ILLSDQPGPSDCHGCPYRHFAPDNLQTSLLTYYSNQGLTSSNLPEIMKTVKEGHYHVACT 440
Query: 417 LTFEAVHSS---------SCDAGINHPNQYFSDSHKILQPKNNNAA 453
FE H+S + HPNQY + S ++ +P+ +
Sbjct: 441 RVFEITHTSKGVEKGQGIGSGESVTHPNQYAARSRELEKPQEGGTS 486
>gi|340723785|ref|XP_003400269.1| PREDICTED: DNA primase large subunit-like [Bombus terrestris]
Length = 555
Score = 287 bits (735), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 167/448 (37%), Positives = 245/448 (54%), Gaps = 29/448 (6%)
Query: 21 LPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARG---KRPEEMENLVRDLWKANMR 77
L +Y + P+ EV L +FE A +RLR+L I + R E +NL L K ++
Sbjct: 26 LQMYDFPPRGEVLLTEFEQLAKERLRLLLHIENNANRTDFKTLEERKQNLNTALAKDGLK 85
Query: 78 H-----------PEASEDVN---KDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLL 123
+ D+ KD ISHF+LRL +C D + WF++ E ++ RF
Sbjct: 86 YYAHLLYAKGCKTPTETDLQYRRKDHISHFILRLSHCFEPDNQTWFINQEVEFFKLRFNS 145
Query: 124 GSSEAKRALMEEFDLPCKAISRTEFENAKEKLEQVARSFDQPLPTADAI-FYKVPFEEVP 182
E L+ + C+ I+ E K++L + S + D FYKVPF++V
Sbjct: 146 LDKEGVEKLLSMHKIDCQQITPEE----KDELREELGSSTTKVKNVDMTEFYKVPFQKVT 201
Query: 183 ELVAGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPI 242
+L+ RRVY+++G A++ +VSL V+ FR NL + R + ER I
Sbjct: 202 DLIRSRRVYLNQGIAFIPQTDLVSLFVSCFRKNLVDGMP-DARMSVGRMYGDER-----I 255
Query: 243 VEALSMSYLGPDYSQTK-EFGEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQ 301
L + D + I LD+L+++S+PLCMR L + LR HHLK+ GR+Q
Sbjct: 256 ASCLKSVHNVSDRTTVLWTSAATPIDKLDELSKTSYPLCMRVLHEALRTHHHLKNSGRIQ 315
Query: 302 LGLFLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQK 361
GLF+KG+G+ +EDAL+FWK EF++K+ +FDKEYAY+IRH YGKEGK+T+YTP C K
Sbjct: 316 YGLFIKGIGVTLEDALSFWKTEFTKKIDPGKFDKEYAYTIRHTYGKEGKQTNYTPLGCTK 375
Query: 362 IISSTPGVGDHHGCPYRHFSEENLRAALGRMGVGSRAMEDVVDKVRNRHYQLACTLTFEA 421
IISS G++HGCP++H + +LR L GV + ++ ++ D + ++Y ACT FE
Sbjct: 376 IISSAVSAGEYHGCPFKHMDQGSLRQKLFNYGVTAASITEIADLAKEQNYFGACTAYFEF 435
Query: 422 VHSSSCDAGINHPNQYFSDSHKILQPKN 449
+H D INHPN YF +S IL N
Sbjct: 436 IHDRLPDKPINHPNIYFMESRAILSKDN 463
>gi|195127589|ref|XP_002008251.1| GI11919 [Drosophila mojavensis]
gi|193919860|gb|EDW18727.1| GI11919 [Drosophila mojavensis]
Length = 533
Score = 287 bits (735), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 154/448 (34%), Positives = 249/448 (55%), Gaps = 25/448 (5%)
Query: 23 LYRYAPQLEVRLEDFE-----------VFAMDRLRVLKGISDALARGKRPEEMENLVRDL 71
LY Y P ++ +++FE VF + L+ SD E ++ +R
Sbjct: 30 LYHYPPTEDIHIDEFEDLALERLRLLRVFDRATTKGLRIFSDDWKEYVNAEMTKDGLRGY 89
Query: 72 WKANM-----RHPEASEDVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSS 126
+ M +H + +D +SHF+LRL YCR+EDL++WF++ E ++Y+F S+
Sbjct: 90 LRMGMPSSGTKHEADVQMRRRDYLSHFILRLAYCRSEDLQRWFVAREMEFFKYKFAALST 149
Query: 127 EAKRALMEEFDLPCKAISRTEFENAKEKLEQVARSFDQPLPTADAI-FYKVPFEEVPELV 185
+ ++ + ++ + + K+ L + + Q + + + FYKVPF +V +LV
Sbjct: 150 AEIKMFLDANNFQIHPLTEEQKDEVKDGLYE--STVGQSVSKIELLEFYKVPFTQVLDLV 207
Query: 186 AGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERD-RLTPIVE 244
RR YI G AYV H +VS+V + + L + + I + E D R+ +++
Sbjct: 208 RTRRCYIKAGFAYVNTHDMVSIVGAKQLEEIE----LGMQAAKAFIADVEADERIARMIK 263
Query: 245 ALSMSYLGPDYSQTKEFGEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGL 304
+L SY G DY+ ++ + I+ LDQL+++S PLCMR + +R HH+KHGGRMQ GL
Sbjct: 264 SLHNSYTGKDYTVCRD-ESVPIESLDQLSKTSMPLCMRMCHEHIRSQHHIKHGGRMQYGL 322
Query: 305 FLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQKIIS 364
FLKG+G+ +ED+L FW+ EF++K+ ++F + Y Y+I HNYGK+G +YTPYSC KII
Sbjct: 323 FLKGIGVTLEDSLRFWREEFTKKMDVDKFTRSYEYNIYHNYGKKGSMVNYTPYSCLKIIK 382
Query: 365 STPGVGDHHGCPYRHFSEENLRAALGRMGVGSRAMEDVVDKVRNRHYQLACTLTFEAVHS 424
GD HGCPY+ +L+A L G+ + +++V+ V HYQ AC F H+
Sbjct: 383 EMAAPGDCHGCPYKTMDPTSLKAKLSAYGLSAGGIDEVMHFVSRNHYQFACGKYFMLTHN 442
Query: 425 SSCDAGINHPNQYFSDSHKILQPKNNNA 452
S+ + INHPN+YF +S ++ + A
Sbjct: 443 STVEPTINHPNKYFEESQILMGNRQKRA 470
>gi|323336720|gb|EGA77984.1| Pri2p [Saccharomyces cerevisiae Vin13]
Length = 524
Score = 286 bits (733), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 172/466 (36%), Positives = 260/466 (55%), Gaps = 35/466 (7%)
Query: 19 STLPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEEMENLVRDLWKANMR- 77
S L Y PQ E+ LE FE++A+DRL++L I L+R K +E+E +++ ++ +
Sbjct: 57 SKLSFYDLPPQGEITLEQFEIWAIDRLKILLEIESCLSRNKSIKEIETIIKPQFQKLLPF 116
Query: 78 HPEASEDVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKRALMEEFD 137
+ E+ ED KD SHF+LRL +CR+++LR+ F+ ET L++ RF + +S + ++ D
Sbjct: 117 NTESLEDRKKDYYSHFILRLCFCRSKELREKFVRAETFLFKIRFNMLTSTDQTKFVQSLD 176
Query: 138 LPC-KAISRTEFENAKEKLEQ-VARSFDQPLPTADA----------IFYKVPFEEVPELV 185
LP + IS E +L Q V+ S L + F K+PFE V ELV
Sbjct: 177 LPLLQFISNEEKAELSHQLYQTVSASLQFQLNLNEEHQRKQYFQQEKFIKLPFENVIELV 236
Query: 186 AGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEA 245
R V++ G+AY+ Q ++L+ +F S L++ LI T + R E DRL PI+
Sbjct: 237 GNRLVFLKDGYAYLPQFQQLNLLSNEFASKLNQELIKT---YQYLPRLNEDDRLLPILNH 293
Query: 246 LSMSYLGPDYSQTK--EFGEISIKDLDQLA------RSSFPLCMRHLFDKLREDHHLKHG 297
LS Y D++Q K +F E +++ + S++PLC+++L + L+++HHL++
Sbjct: 294 LSSGYTIADFNQQKANQFSENVDDEINAQSVWSEEISSNYPLCIKNLMEGLKKNHHLRYY 353
Query: 298 GRMQLGLFLKGVGLRMEDALAFWKAEFSQ--KVGAERFDKEYAYSIRHNYGKEGKRTDYT 355
GR QL LFLKG+GL ++AL FW F++ + E+F+KEY YS RHNYG EG R +Y
Sbjct: 354 GRQQLSLFLKGIGLSADEALKFWSEAFTRNGNMTMEKFNKEYRYSFRHNYGLEGNRINYK 413
Query: 356 PYSCQKIISST-PGVGDHHGCPYRHFSEENLRAALGRMGVGSRAMEDVVDKVRNRHYQLA 414
P+ C I+S PG GD+HGCP+R +S E L A L M + + V+D + Y +A
Sbjct: 414 PWDCHTILSKPRPGRGDYHGCPFRDWSHERLSAELRSMKLTQAQIISVLDSCQKGEYTIA 473
Query: 415 CTLTFEAVHSSSC-------DAGINHPNQYFSDSHKILQPKNNNAA 453
CT FE H+S+ I HPN YF S + LQ K A
Sbjct: 474 CTKVFEMTHNSASADLEIGEQTHIAHPNLYFERSRQ-LQKKQAEAG 518
>gi|321262893|ref|XP_003196165.1| DNA primase large subunit (DNA primase 58 kDa subunit) (p58)
[Cryptococcus gattii WM276]
gi|317462640|gb|ADV24378.1| DNA primase large subunit (DNA primase 58 kDa subunit) (p58)
[Cryptococcus gattii WM276]
Length = 502
Score = 286 bits (733), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 166/456 (36%), Positives = 249/456 (54%), Gaps = 42/456 (9%)
Query: 21 LPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEEMENLVRDLWKANM---- 76
L Y P L++ LE+FE A+ RLRVL I R ++ + + K ++
Sbjct: 39 LNFYERPPALDITLEEFETCAISRLRVLSHIESLSHRSLPYSQVASGIATYAKMHLPLSS 98
Query: 77 ---RHPEASEDVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKRALM 133
R+ E+ +D I H+VLRL +CR+ DLR+ F+ E AL++ RF + A +
Sbjct: 99 NTARNVNLDEERRRDEIGHWVLRLAFCRSPDLRQRFVRSELALFKSRFETDDKNERAAFL 158
Query: 134 EEFDLPCKAISRTEFENAKEKLEQVARSFDQPLPTA---DAI---FYKVPFEEVPELVAG 187
+ + E + K +L+Q+ LP DA+ ++KVP+ VP+LV
Sbjct: 159 KSLSFNYDTVDEDEKKLFKTELQQM-------LPKGSKEDAVSETWFKVPWYTVPDLVGA 211
Query: 188 RRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEALS 247
RRV + G A+V +SLV+ F L KAL T + R E +RL P+++ L+
Sbjct: 212 RRVLVKDGLAFVPQSLQLSLVLQAFADRLEKALEFTAKNLP---RLDEDERLGPVIDHLA 268
Query: 248 MSYL----GPDYSQTKEFGE---ISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRM 300
S+L DY + E G+ ++ +D +AR FP CMRHL++KL++DHHLKH GR+
Sbjct: 269 SSFLSGIGASDYQPSNELGDGMTVTADTIDDVARKHFPPCMRHLYEKLKKDHHLKHWGRL 328
Query: 301 QLGLFLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQ 360
QL LFLKG+GL ++ A+ FW+ + + ++F+KEY Y+IRH+YG+EG+R +Y P +CQ
Sbjct: 329 QLTLFLKGLGLPLDQAILFWRRSYGASMTDDKFNKEYKYNIRHSYGQEGRRANYPPKNCQ 388
Query: 361 KIIS-STPGVGDHHGCPYRHFSEENLRAALGR-----MGVGSRAMEDVVDKVRNRHYQLA 414
+I++ PG D HGCP+RHFS ENL A L S M DV+D V+ HY LA
Sbjct: 389 QILTQDQPGTQDSHGCPFRHFSSENLTAFLTNTYPDHFSRTSPEMRDVLDSVKASHYHLA 448
Query: 415 CTLTFEAVHSSSCDAG------INHPNQYFSDSHKI 444
CT FE H G ++HPN++ S ++
Sbjct: 449 CTRVFEVTHGVKKGEGLGNGESVSHPNKWADRSREL 484
>gi|397569546|gb|EJK46812.1| hypothetical protein THAOC_34503 [Thalassiosira oceanica]
Length = 424
Score = 286 bits (733), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 159/405 (39%), Positives = 236/405 (58%), Gaps = 21/405 (5%)
Query: 65 ENLVRDLWKANMRHPEASEDVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLG 124
EN +L K +H + + D+ SHF+LR YCRTEDLR+WFL+ E L++YR
Sbjct: 9 ENYRTELGKCIKKHLSSKDGDRLDVASHFILRAAYCRTEDLRRWFLTQECHLFKYRLESA 68
Query: 125 SSEAKRALMEEF---DLPCKAISRTEFENAKEKLEQVARSFDQPLPTADAIFYKVPFEEV 181
SS AL E D +SR E E + KL V P+ +Y+VPF +
Sbjct: 69 SSNNGNALKEFLARNDFALDRVSRAEKEGMRGKLLSVTGG-PNPVEFLSTDYYRVPFVQA 127
Query: 182 PELVAGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTP 241
ELVA R Y+ G A+V + ++VS+VV +FR +LSK++ L + + +E R+ P
Sbjct: 128 LELVARRECYVEDGFAFVPLTRIVSIVVAKFRVSLSKSMALAVGAF-GQVAHEESTRIGP 186
Query: 242 IVEALSMSYLGPDY--SQTKEFGE--ISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHG 297
++++++ Y GP + GE ++ +D LA S PLCM+ L L+ DH LKH
Sbjct: 187 LLKSMNSQYTGPSTPDAMVGLDGERVLTAATVDGLAAQSMPLCMQQLHTGLKRDHKLKHQ 246
Query: 298 GRMQLGLFLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTDYTPY 357
GR+Q GLFLKG G+ +E+ F++ EF++ + +E+F+K+Y+YSIRH +GKEGKR YTPY
Sbjct: 247 GRLQFGLFLKGSGMSLEEHTLFFQREFTRIMTSEQFNKQYSYSIRHMHGKEGKRASYTPY 306
Query: 358 SCQKIISSTP---GVGDHHGCPYRHFSEENLRAALGRMGVGSRAMEDVVDKVRNR-HYQL 413
+C KII P GV +HHGCPY+H+ ++NL A LG++ +G A D + +++ ++QL
Sbjct: 307 NCMKIIMGNPPQSGV-EHHGCPYKHYDDQNLSALLGKLKIGDSADRDAIMRLKKEGNFQL 365
Query: 414 ACTLTFEAVHS-SSCDAGI------NHPNQYFSDSHKILQPKNNN 451
AC FE H +S AG+ NHPN +F+ S Q K+
Sbjct: 366 ACAKQFEVQHPLASTVAGVNMDGVGNHPNAWFNASVSYHQAKSGG 410
>gi|409046072|gb|EKM55552.1| hypothetical protein PHACADRAFT_173695 [Phanerochaete carnosa
HHB-10118-sp]
Length = 489
Score = 286 bits (732), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 171/455 (37%), Positives = 258/455 (56%), Gaps = 35/455 (7%)
Query: 21 LPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEEMENLVRDLWKANMR--- 77
L Y P EV +E+FE A+DRLR+L I + AR + EE++ + +R
Sbjct: 24 LNFYDQPPLGEVTIEEFETCALDRLRILAEIESSFARNRPWEELKRFTLEQCSKYLRLDA 83
Query: 78 ---HPEASE-DVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKRALM 133
H + +E KD + HFVLRL +CR+E+LR+ F+ ET L+R R+ + + +
Sbjct: 84 SSAHKQDTEAQRRKDHLGHFVLRLAFCRSEELRRRFVKAETTLFRIRYEEDDRQEREEFL 143
Query: 134 EEFDLPCKAISRTEFENAKEKLEQVARSFDQPL---PTADA-IFYKVPFEEVPELVAGRR 189
+ +++ E + +L+ A ++ P P +A +YKVP+ VP+LV R+
Sbjct: 144 QSRKFGWESVEPEEVKQYASQLKAAASTYLPPKEFEPNLEADKYYKVPWTRVPDLVERRK 203
Query: 190 VYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEALSMS 249
V++ G AYV + S+V +F+ +L KAL++T + R E R+ P+++ LS
Sbjct: 204 VFLKGGKAYVPSKEQSSIVFEEFQRSLEKALLVTLKHLP---RLDEDTRIFPLLDNLSQG 260
Query: 250 YLG------PDYSQTKEFGEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLG 303
+L + + EI+ +D+L+R FP+CMRHL D L+ D HLKH GR+Q G
Sbjct: 261 FLAGVSSEWSSTTSSATGDEITADMVDELSRRHFPMCMRHLHDTLKRDKHLKHFGRLQYG 320
Query: 304 LFLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQKI- 362
LFLK +GL +E+ALAFW+ FS + ++F+KEY Y+IRH+YG EGKR +Y SCQ+I
Sbjct: 321 LFLKVLGLSIEEALAFWRRSFS-GMTDDKFNKEYKYNIRHSYGLEGKRANYPAKSCQQIL 379
Query: 363 ISSTPGVGDHHGCPYRHFSEENLRAALGRM----GVGSRAMEDVVDKVRNRHYQLACTLT 418
+S PG D HGCPYRHFS +NL+ AL M G+ + +VV V++ HY +ACT
Sbjct: 380 LSDQPGPQDSHGCPYRHFSLDNLQTALLSMYSSQGLTVSDLPEVVSTVKSGHYHVACTRV 439
Query: 419 FEAVHSS-------SCDAG--INHPNQYFSDSHKI 444
FE H++ D G + HPNQY S S ++
Sbjct: 440 FEITHTAQGLKKGEGVDDGESVTHPNQYASRSREL 474
>gi|390598085|gb|EIN07484.1| DNA primase large subunit [Punctularia strigosozonata HHB-11173
SS5]
Length = 485
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 164/450 (36%), Positives = 256/450 (56%), Gaps = 32/450 (7%)
Query: 21 LPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEEMENLVR-------DLWK 73
L Y P +V +E+FE FA+DRLRVL GI + R + +E++++ L
Sbjct: 27 LNFYDRPPLEDVTIEEFETFALDRLRVLAGIESSFVRNRTYDELKSVTSAHCKKYLPLAA 86
Query: 74 ANMRHPEASEDVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKRALM 133
+ + + KD I HFVLRL +CR+E+LR+ FL ET L+R RF S+ + + +
Sbjct: 87 NTAKSVDTDAERRKDHIGHFVLRLAFCRSEELRRRFLKAETTLFRVRFDEDDSKERESFL 146
Query: 134 EEFDLPCKAISRTEFENAKEKLEQVARSFDQPLPTADAIFYKVPFEEVPELVAGRRVYIH 193
+ ++ ++ E +++L A F + A+ F KV + VP+LV RRV++
Sbjct: 147 KTKEMNWIDVTDEEKSMYRDQL-MAACDFTKEKLAAER-FVKVRWTRVPDLVEKRRVFLK 204
Query: 194 KGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEALSMSYLG- 252
+G A+V Q S+V F+S+L +AL T++ ++ R E R+ P+++ LS +L
Sbjct: 205 QGMAWVPSSQQSSIVFQAFQSSLEEALKATSKHFS---RLDEDTRIVPLLDNLSRGFLAG 261
Query: 253 -----PDYSQTKEFGEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLK 307
D + EI + +D LAR FP+CMRHL D+L++D HLKH GR+Q GLFLK
Sbjct: 262 VPSEWSDATSNPSGDEIKAEMVDDLARKYFPMCMRHLHDELKKDRHLKHFGRLQYGLFLK 321
Query: 308 GVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQKIISSTP 367
+GL +++A+ FW+ FS + ++F+KEY Y+IRH+YG EGKR +Y SC +I+ S P
Sbjct: 322 VLGLSIDEAITFWRRSFSN-MTDDKFNKEYKYNIRHSYGLEGKRANYPAKSCLQILQSQP 380
Query: 368 GVGDHHGCPYRHFSEENLRAAL----GRMGVGSRAMEDVVDKVRNRHYQLACTLTFEAVH 423
D HGCPYRHFS +NL+AAL G+ + M +++ V++ HY +ACT FE H
Sbjct: 381 SSQDSHGCPYRHFSPDNLQAALLAAYQTQGLSTSDMPEIMHAVKSGHYHVACTRVFEITH 440
Query: 424 SS---------SCDAGINHPNQYFSDSHKI 444
++ + HPN+Y + S ++
Sbjct: 441 AAVGIKKGEGVGGGESVTHPNEYAARSREL 470
>gi|345564735|gb|EGX47695.1| hypothetical protein AOL_s00083g203 [Arthrobotrys oligospora ATCC
24927]
Length = 523
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 179/466 (38%), Positives = 259/466 (55%), Gaps = 44/466 (9%)
Query: 21 LPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEEMENLVRDLW------KA 74
L Y P+ EV LE+FE +A+DRL+VL I R P E++ +R L +
Sbjct: 43 LNFYTDPPKDEVSLEEFEQWAIDRLKVLGEIETCQFRNNTPTEIDTTLRKLLDKYLPLNS 102
Query: 75 NMRHPEA-----------SEDVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLL 123
N PE+ + + KD SHF+LRL + R++DLR+ F + E+ L+R+RF
Sbjct: 103 NSSIPESERSNPRRFLGLTNERKKDHYSHFILRLAFARSDDLRRRFTTTESILFRHRFTT 162
Query: 124 GSSEAKRALMEEFDLPCKAISRTEFENAKEKLEQVARSFDQ-PLPTADAIF-----YKVP 177
++ + M+ L + + E + E+L+ V S + P A +F KV
Sbjct: 163 DNTIERAEFMDSLQLNSEVVGEAEKVSLAEELKAVLISGSKMPAEKARQMFEQEQYLKVD 222
Query: 178 FEEVPELVAGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERD 237
++ V +LV GR+V++ +G+AYV ++SLV+ +F L ++LI T R E D
Sbjct: 223 WDRVSDLVEGRKVFLRRGYAYVPNSMLLSLVMAEFSKRLDESLIKTARYLPHL---DEDD 279
Query: 238 RLTPIVEALSMSYLGPDYSQTKEF----GE-ISIKDLDQLARSSFPLCMRHLFDKLREDH 292
RL PI+ LS + P+Y+ + GE I+ +D L+ S FPLCM++L LR D
Sbjct: 280 RLIPILNHLSKGFTAPEYTSSTSLASLSGEAITASQIDNLS-SHFPLCMKNLHASLRRDK 338
Query: 293 HLKHGGRMQLGLFLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRT 352
HL+H GR+Q GLFLKG+GL +++AL FW+ FS K ++F KEY Y+IRH+YG +G
Sbjct: 339 HLRHFGRLQYGLFLKGLGLSIDEALIFWRQSFS-KFTDDQFSKEYRYNIRHSYGLQGAGR 397
Query: 353 DYTPYSCQKII-SSTPGVGDHHGCPYRHFSEENLRAALGR-MGVGSRAMEDVVDK-VRNR 409
+Y PYSCQ+I+ PG GD HGCPYRHFS ENL A+GR MGV R++ + V + V +
Sbjct: 398 NYKPYSCQQILMEHPPGAGDSHGCPYRHFSIENLTVAMGRLMGVEDRSVVNGVKQDVEAK 457
Query: 410 HYQLACTLTFEAVHSSSC-----DAG---INHPNQYFSDSHKILQP 447
Y LAC FE +H AG I HPN+YF S + P
Sbjct: 458 KYHLACNRVFEYLHEKELKKKEGGAGKETITHPNEYFDRSWGLKNP 503
>gi|310790518|gb|EFQ26051.1| eukaryotic and archaeal DNA primase [Glomerella graminicola M1.001]
Length = 502
Score = 286 bits (731), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 172/455 (37%), Positives = 252/455 (55%), Gaps = 38/455 (8%)
Query: 21 LPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEEMENLVRDLW------KA 74
L Y AP ++ LE FE +A+DRLR+L + R K P+E+ N ++ L ++
Sbjct: 38 LNFYADAPTADITLEQFEQWAIDRLRILAELEACAFRNKSPQEVANHMKPLLDKYLPLES 97
Query: 75 NMRH-PEASEDVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKRALM 133
N H P+ KD SHF+LRL + RTEDLR+ F +ET L+R R + A +
Sbjct: 98 NTSHSPKLFAQRQKDHYSHFILRLAFARTEDLRRRFTRVETMLFRLRLNSDDHNERSAFI 157
Query: 134 EEFDLPC-KAISRTEFENAKEKLEQVARSFDQPLPTADAIFYKVPFEEVPELVAGRRVYI 192
DL +A++ E +L ++R + + T D ++KV ++ VPELV RRV++
Sbjct: 158 SSLDLDWWEAVTDEEKREYAPELAAMSRGWGKTASTEDDTWFKVDWDRVPELVEQRRVFL 217
Query: 193 HKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEALSMSYLG 252
G A+V + S+V+ +F S L + L LT R + R E DRLTPI++ LS +++
Sbjct: 218 KAGKAFVPGREQTSMVIGEFVSRLERQLELTAR---ALPRLDEDDRLTPILDHLSKNFIT 274
Query: 253 PDYSQTKEFG-----EISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLK 307
PD S + EI+ +++D LA+ FP CM HL LR D HLKH GR+Q LFLK
Sbjct: 275 PDSSYSSNTAAPPGAEITARNIDNLAQH-FPACMSHLHRSLRRDAHLKHFGRLQYTLFLK 333
Query: 308 GVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTD-----YTPYSCQKI 362
G+GL +E+ L FW+ F + + + F+KEY Y++RH YG G ++ Y+P+SCQKI
Sbjct: 334 GIGLNLEECLVFWRQAF-RNITDDTFNKEYRYNVRHTYGDVGGDSNRRGGGYSPFSCQKI 392
Query: 363 ISS-TPGVGDHHGCPYRHFSEENLRAALGRMGVGSRA-MEDVVDKVRNRHYQLACTLTFE 420
++ PG G+ HGCPYRHF+ ENL + MGV RA + V + N+ + +AC FE
Sbjct: 393 LTEHPPGPGEAHGCPYRHFNLENLTTLVQSMGVSDRATLHGVKEDKDNQKFHMACNRVFE 452
Query: 421 AVHSSSC----DAG---------INHPNQYFSDSH 442
+H D G I HPN+YF S+
Sbjct: 453 HLHKQELKRAKDEGVFTSAQLETIVHPNEYFKRSY 487
>gi|323347794|gb|EGA82058.1| Pri2p [Saccharomyces cerevisiae Lalvin QA23]
Length = 528
Score = 286 bits (731), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 168/454 (37%), Positives = 255/454 (56%), Gaps = 34/454 (7%)
Query: 19 STLPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEEMENLVRDLWKANMR- 77
S L Y PQ E+ LE FE++A+DRL++L I L+R K +E+E +++ ++ +
Sbjct: 57 SKLSFYDLPPQGEITLEQFEIWAIDRLKILLEIESCLSRNKSIKEIETIIKPQFQKLLPF 116
Query: 78 HPEASEDVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKRALMEEFD 137
+ E+ ED KD SHF+LRL +CR+++LR+ F+ ET L++ RF + +S + ++ D
Sbjct: 117 NTESLEDRKKDYYSHFILRLCFCRSKELREKFVRAETFLFKIRFNMLTSTDQTKFVQSLD 176
Query: 138 LPC-KAISRTEFENAKEKLEQ-VARSFDQPLPTADA----------IFYKVPFEEVPELV 185
LP + IS E +L Q V+ S L + F K+PFE V ELV
Sbjct: 177 LPLLQFISNEEKAELSHQLYQTVSASLQFQLNLNEEHQRKQYFQQEKFIKLPFENVIELV 236
Query: 186 AGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEA 245
R V++ G+AY+ Q ++L+ +F S L++ LI T + R E DRL PI+
Sbjct: 237 GNRLVFLKDGYAYLPQFQQLNLLSNEFASKLNQELIKT---YQYLPRLNEDDRLLPILNH 293
Query: 246 LSMSYLGPDYSQTK--EFGEISIKDLDQLA------RSSFPLCMRHLFDKLREDHHLKHG 297
LS Y D++Q K +F E +++ + S++PLC+++L + L+++HHL++
Sbjct: 294 LSSGYTIADFNQQKANQFSENVDDEINAQSVWSEEISSNYPLCIKNLMEGLKKNHHLRYY 353
Query: 298 GRMQLGLFLKGVGLRMEDALAFWKAEFSQ--KVGAERFDKEYAYSIRHNYGKEGKRTDYT 355
GR QL LFLKG+GL ++AL FW F++ + E+F+KEY YS RHNYG EG R +Y
Sbjct: 354 GRQQLSLFLKGIGLSADEALKFWSEAFTRNGNMTMEKFNKEYRYSFRHNYGLEGNRINYK 413
Query: 356 PYSCQKIISST-PGVGDHHGCPYRHFSEENLRAALGRMGVGSRAMEDVVDKVRNRHYQLA 414
P+ C I+S PG GD+HGCP+R +S E L A L M + + V+D + Y +A
Sbjct: 414 PWDCHTILSKPRPGRGDYHGCPFRDWSHERLSAELRSMKLTQAQIISVLDSCQKGEYTIA 473
Query: 415 CTLTFEAVHSSSC-------DAGINHPNQYFSDS 441
CT FE H+S+ I HPN YF S
Sbjct: 474 CTKVFEMTHNSASADLEIGEQTHIAHPNLYFERS 507
>gi|151941501|gb|EDN59864.1| DNA primase p58 polypeptide [Saccharomyces cerevisiae YJM789]
Length = 528
Score = 286 bits (731), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 168/454 (37%), Positives = 255/454 (56%), Gaps = 34/454 (7%)
Query: 19 STLPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEEMENLVRDLWKANMR- 77
S L Y PQ E+ LE FE++A+DRL++L I L+R K +E+E +++ ++ +
Sbjct: 57 SKLSFYDLPPQGEITLEQFEIWAIDRLKILLEIESCLSRNKSIKEIETIIKPQFQKLLPF 116
Query: 78 HPEASEDVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKRALMEEFD 137
+ E+ ED KD SHF+LRL +CR+++LR+ F+ ET L++ RF + +S + ++ D
Sbjct: 117 NTESLEDRKKDYYSHFILRLCFCRSKELREKFVRAETFLFKIRFNMLTSTDQTKFVQSLD 176
Query: 138 LPC-KAISRTEFENAKEKLEQ-VARSFDQPLPTADA----------IFYKVPFEEVPELV 185
LP + IS E +L Q V+ S L + F K+PFE V ELV
Sbjct: 177 LPLLQFISNEEKAELSHQLYQTVSASLQFQLNLNEEHQRKQYFQQEKFIKLPFENVIELV 236
Query: 186 AGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEA 245
R V++ G+AY+ Q ++L+ +F S L++ LI T + R E DRL PI+
Sbjct: 237 GNRLVFLKDGYAYLPQFQQLNLLSNEFASKLNQELIKT---YQYLPRLNEDDRLLPILNH 293
Query: 246 LSMSYLGPDYSQTK--EFGEISIKDLDQLA------RSSFPLCMRHLFDKLREDHHLKHG 297
LS Y D++Q K +F E +++ + S++PLC+++L + L+++HHL++
Sbjct: 294 LSSGYTIADFNQQKANQFSENVDDEINAQSVWSEEISSNYPLCIKNLMEGLKKNHHLRYY 353
Query: 298 GRMQLGLFLKGVGLRMEDALAFWKAEFSQ--KVGAERFDKEYAYSIRHNYGKEGKRTDYT 355
GR QL LFLKG+GL ++AL FW F++ + E+F+KEY YS RHNYG EG R +Y
Sbjct: 354 GRQQLSLFLKGIGLSADEALKFWSEAFTRNGNMTMEKFNKEYRYSFRHNYGLEGNRINYK 413
Query: 356 PYSCQKIISST-PGVGDHHGCPYRHFSEENLRAALGRMGVGSRAMEDVVDKVRNRHYQLA 414
P+ C I+S PG GD+HGCP+R +S E L A L M + + V+D + Y +A
Sbjct: 414 PWDCHTILSKPRPGRGDYHGCPFRDWSHERLSAELRSMKLTQAQIISVLDSCQKGEYTIA 473
Query: 415 CTLTFEAVHSSSC-------DAGINHPNQYFSDS 441
CT FE H+S+ I HPN YF S
Sbjct: 474 CTKVFEMTHNSASADLENGEQTHIAHPNLYFERS 507
>gi|207343485|gb|EDZ70932.1| YKL045Wp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 528
Score = 285 bits (730), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 168/454 (37%), Positives = 255/454 (56%), Gaps = 34/454 (7%)
Query: 19 STLPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEEMENLVRDLWKANMR- 77
S L Y PQ E+ LE FE++A+DRL++L I L+R K +E+E +++ ++ +
Sbjct: 57 SKLSFYDLPPQGEITLEQFEIWAIDRLKILLEIESCLSRNKSIKEIETIIKPQFQKLLPF 116
Query: 78 HPEASEDVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKRALMEEFD 137
+ E+ ED KD SHF+LRL +CR+++LR+ F+ ET L++ RF + +S + ++ D
Sbjct: 117 NTESLEDRKKDYYSHFILRLCFCRSKELREKFVRAETFLFKIRFNMLTSTDQTKFVQSLD 176
Query: 138 LPC-KAISRTEFENAKEKLEQ-VARSFDQPLPTADA----------IFYKVPFEEVPELV 185
LP + IS E +L Q V+ S L + F K+PFE V ELV
Sbjct: 177 LPLLQFISNEEKAELSHQLYQTVSASLQFQLNLNEEHQRKQYFQQEKFIKLPFENVIELV 236
Query: 186 AGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEA 245
R V++ G+AY+ Q ++L+ +F S L++ LI T + R E DRL PI+
Sbjct: 237 GNRLVFLKDGYAYLPQFQQLNLLSNEFASKLNQELIKT---YQYLPRLNEDDRLLPILNH 293
Query: 246 LSMSYLGPDYSQTK--EFGEISIKDLDQLA------RSSFPLCMRHLFDKLREDHHLKHG 297
LS Y D++Q K +F E +++ + S++PLC+++L + L+++HHL++
Sbjct: 294 LSSGYTIADFNQQKANQFSENVDDEINAQSVWSEEISSNYPLCIKNLMEGLKKNHHLRYY 353
Query: 298 GRMQLGLFLKGVGLRMEDALAFWKAEFSQ--KVGAERFDKEYAYSIRHNYGKEGKRTDYT 355
GR QL LFLKG+GL ++AL FW F++ + E+F+KEY YS RHNYG EG R +Y
Sbjct: 354 GRQQLSLFLKGIGLSADEALKFWSEAFTRNGNMTMEKFNKEYRYSFRHNYGLEGNRINYK 413
Query: 356 PYSCQKIISST-PGVGDHHGCPYRHFSEENLRAALGRMGVGSRAMEDVVDKVRNRHYQLA 414
P+ C I+S PG GD+HGCP+R +S E L A L M + + V+D + Y +A
Sbjct: 414 PWDCHTILSKPRPGRGDYHGCPFRDWSHERLSAELRSMKLTQAQIISVLDSCQKGEYTIA 473
Query: 415 CTLTFEAVHSSSC-------DAGINHPNQYFSDS 441
CT FE H+S+ I HPN YF S
Sbjct: 474 CTKVFEMTHNSASADLEIGEQTHIAHPNLYFERS 507
>gi|323304097|gb|EGA57875.1| Pri2p [Saccharomyces cerevisiae FostersB]
Length = 528
Score = 285 bits (730), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 168/454 (37%), Positives = 255/454 (56%), Gaps = 34/454 (7%)
Query: 19 STLPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEEMENLVRDLWKANMR- 77
S L Y PQ E+ LE FE++A+DRL++L I L+R K +E+E +++ ++ +
Sbjct: 57 SKLSFYDLPPQGEITLEQFEIWAIDRLKILLEIESCLSRNKSIKEIETIIKPQFQKLLPF 116
Query: 78 HPEASEDVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKRALMEEFD 137
+ E+ ED KD SHF+LRL +CR+++LR+ F+ ET L++ RF + +S + ++ D
Sbjct: 117 NTESLEDRKKDYYSHFILRLCFCRSKELREKFVRAETFLFKIRFNMLTSTDQTKFVQSLD 176
Query: 138 LPC-KAISRTEFENAKEKLEQ-VARSFDQPLPTADA----------IFYKVPFEEVPELV 185
LP + IS E +L Q V+ S L + F K+PFE V ELV
Sbjct: 177 LPLLQFISNEEKAELSHQLYQTVSASLQFQLNLNEEHQRKQYFQQEKFIKLPFENVIELV 236
Query: 186 AGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEA 245
R V++ G+AY+ Q ++L+ +F S L++ LI T + R E DRL PI+
Sbjct: 237 GNRLVFLKDGYAYLPQFQQLNLLSNEFASKLNQELIKT---YQYLPRLNEDDRLLPILNH 293
Query: 246 LSMSYLGPDYSQTK--EFGEISIKDLDQLA------RSSFPLCMRHLFDKLREDHHLKHG 297
LS Y D++Q K +F E +++ + S++PLC+++L + L+++HHL++
Sbjct: 294 LSSGYTIADFNQQKANQFSENVDDEINAQSVWSEEISSNYPLCIKNLMEGLKKNHHLRYY 353
Query: 298 GRMQLGLFLKGVGLRMEDALAFWKAEFSQ--KVGAERFDKEYAYSIRHNYGKEGKRTDYT 355
GR QL LFLKG+GL ++AL FW F++ + E+F+KEY YS RHNYG EG R +Y
Sbjct: 354 GRQQLSLFLKGIGLSADEALKFWSEAFTRNGNMTMEKFNKEYRYSFRHNYGLEGNRINYK 413
Query: 356 PYSCQKIISST-PGVGDHHGCPYRHFSEENLRAALGRMGVGSRAMEDVVDKVRNRHYQLA 414
P+ C I+S PG GD+HGCP+R +S E L A L M + + V+D + Y +A
Sbjct: 414 PWDCHTILSKPRPGRGDYHGCPFRDWSHERLSAELRSMKLTQAQIISVLDSCQKGEYTIA 473
Query: 415 CTLTFEAVHSSSC-------DAGINHPNQYFSDS 441
CT FE H+S+ I HPN YF S
Sbjct: 474 CTKVFEMTHNSASADLEIGEQTHIAHPNLYFERS 507
>gi|6322806|ref|NP_012879.1| Pri2p [Saccharomyces cerevisiae S288c]
gi|130899|sp|P20457.1|PRI2_YEAST RecName: Full=DNA primase large subunit; AltName: Full=DNA
polymerase alpha:primase complex p58 subunit; Short=DNA
polymerase-primase complex p58 subunit; Short=Pol
alpha-primase complex p58 subunit; AltName: Full=DNA
primase 58 kDa subunit
gi|172235|gb|AAA34900.1| PR12 [Saccharomyces cerevisiae]
gi|486060|emb|CAA81880.1| PRI2 [Saccharomyces cerevisiae]
gi|666094|emb|CAA50626.1| DNA primase large chain (P58) [Saccharomyces cerevisiae]
gi|285813215|tpg|DAA09112.1| TPA: Pri2p [Saccharomyces cerevisiae S288c]
gi|349579518|dbj|GAA24680.1| K7_Pri2p [Saccharomyces cerevisiae Kyokai no. 7]
gi|392298094|gb|EIW09192.1| Pri2p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 528
Score = 285 bits (730), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 168/454 (37%), Positives = 255/454 (56%), Gaps = 34/454 (7%)
Query: 19 STLPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEEMENLVRDLWKANMR- 77
S L Y PQ E+ LE FE++A+DRL++L I L+R K +E+E +++ ++ +
Sbjct: 57 SKLSFYDLPPQGEITLEQFEIWAIDRLKILLEIESCLSRNKSIKEIETIIKPQFQKLLPF 116
Query: 78 HPEASEDVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKRALMEEFD 137
+ E+ ED KD SHF+LRL +CR+++LR+ F+ ET L++ RF + +S + ++ D
Sbjct: 117 NTESLEDRKKDYYSHFILRLCFCRSKELREKFVRAETFLFKIRFNMLTSTDQTKFVQSLD 176
Query: 138 LPC-KAISRTEFENAKEKLEQ-VARSFDQPLPTADA----------IFYKVPFEEVPELV 185
LP + IS E +L Q V+ S L + F K+PFE V ELV
Sbjct: 177 LPLLQFISNEEKAELSHQLYQTVSASLQFQLNLNEEHQRKQYFQQEKFIKLPFENVIELV 236
Query: 186 AGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEA 245
R V++ G+AY+ Q ++L+ +F S L++ LI T + R E DRL PI+
Sbjct: 237 GNRLVFLKDGYAYLPQFQQLNLLSNEFASKLNQELIKT---YQYLPRLNEDDRLLPILNH 293
Query: 246 LSMSYLGPDYSQTK--EFGEISIKDLDQLA------RSSFPLCMRHLFDKLREDHHLKHG 297
LS Y D++Q K +F E +++ + S++PLC+++L + L+++HHL++
Sbjct: 294 LSSGYTIADFNQQKANQFSENVDDEINAQSVWSEEISSNYPLCIKNLMEGLKKNHHLRYY 353
Query: 298 GRMQLGLFLKGVGLRMEDALAFWKAEFSQ--KVGAERFDKEYAYSIRHNYGKEGKRTDYT 355
GR QL LFLKG+GL ++AL FW F++ + E+F+KEY YS RHNYG EG R +Y
Sbjct: 354 GRQQLSLFLKGIGLSADEALKFWSEAFTRNGNMTMEKFNKEYRYSFRHNYGLEGNRINYK 413
Query: 356 PYSCQKIISST-PGVGDHHGCPYRHFSEENLRAALGRMGVGSRAMEDVVDKVRNRHYQLA 414
P+ C I+S PG GD+HGCP+R +S E L A L M + + V+D + Y +A
Sbjct: 414 PWDCHTILSKPRPGRGDYHGCPFRDWSHERLSAELRSMKLTQAQIISVLDSCQKGEYTIA 473
Query: 415 CTLTFEAVHSSSC-------DAGINHPNQYFSDS 441
CT FE H+S+ I HPN YF S
Sbjct: 474 CTKVFEMTHNSASADLEIGEQTHIAHPNLYFERS 507
>gi|190409782|gb|EDV13047.1| DNA primase p58 polypeptide [Saccharomyces cerevisiae RM11-1a]
gi|256272454|gb|EEU07435.1| Pri2p [Saccharomyces cerevisiae JAY291]
gi|323332790|gb|EGA74195.1| Pri2p [Saccharomyces cerevisiae AWRI796]
Length = 528
Score = 285 bits (730), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 168/454 (37%), Positives = 255/454 (56%), Gaps = 34/454 (7%)
Query: 19 STLPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEEMENLVRDLWKANMR- 77
S L Y PQ E+ LE FE++A+DRL++L I L+R K +E+E +++ ++ +
Sbjct: 57 SKLSFYDLPPQGEITLEQFEIWAIDRLKILLEIESCLSRNKSIKEIETIIKPQFQKLLPF 116
Query: 78 HPEASEDVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKRALMEEFD 137
+ E+ ED KD SHF+LRL +CR+++LR+ F+ ET L++ RF + +S + ++ D
Sbjct: 117 NTESLEDRKKDYYSHFILRLCFCRSKELREKFVRAETFLFKIRFNMLTSTDQTKFVQSLD 176
Query: 138 LPC-KAISRTEFENAKEKLEQ-VARSFDQPLPTADA----------IFYKVPFEEVPELV 185
LP + IS E +L Q V+ S L + F K+PFE V ELV
Sbjct: 177 LPLLQFISNEEKAELSHQLYQTVSASLQFQLNLNEEHQRKQYFQQEKFIKLPFENVIELV 236
Query: 186 AGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEA 245
R V++ G+AY+ Q ++L+ +F S L++ LI T + R E DRL PI+
Sbjct: 237 GNRLVFLKDGYAYLPQFQQLNLLSNEFASKLNQELIKT---YQYLPRLNEDDRLLPILNH 293
Query: 246 LSMSYLGPDYSQTK--EFGEISIKDLDQLA------RSSFPLCMRHLFDKLREDHHLKHG 297
LS Y D++Q K +F E +++ + S++PLC+++L + L+++HHL++
Sbjct: 294 LSSGYTIADFNQQKANQFSENVDDEINAQSVWSEEISSNYPLCIKNLMEGLKKNHHLRYY 353
Query: 298 GRMQLGLFLKGVGLRMEDALAFWKAEFSQ--KVGAERFDKEYAYSIRHNYGKEGKRTDYT 355
GR QL LFLKG+GL ++AL FW F++ + E+F+KEY YS RHNYG EG R +Y
Sbjct: 354 GRQQLSLFLKGIGLSADEALKFWSEAFTRNGNMTMEKFNKEYRYSFRHNYGLEGNRINYK 413
Query: 356 PYSCQKIISST-PGVGDHHGCPYRHFSEENLRAALGRMGVGSRAMEDVVDKVRNRHYQLA 414
P+ C I+S PG GD+HGCP+R +S E L A L M + + V+D + Y +A
Sbjct: 414 PWDCHTILSKPRPGRGDYHGCPFRDWSHERLSAELRSMKLTQAQIISVLDSCQKGEYTIA 473
Query: 415 CTLTFEAVHSSSC-------DAGINHPNQYFSDS 441
CT FE H+S+ I HPN YF S
Sbjct: 474 CTKVFEMTHNSASADLEIGEQTHIAHPNLYFERS 507
>gi|323308184|gb|EGA61433.1| Pri2p [Saccharomyces cerevisiae FostersO]
Length = 528
Score = 285 bits (730), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 168/454 (37%), Positives = 255/454 (56%), Gaps = 34/454 (7%)
Query: 19 STLPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEEMENLVRDLWKANMR- 77
S L Y PQ E+ LE FE++A+DRL++L I L+R K +E+E +++ ++ +
Sbjct: 57 SKLSFYDLPPQGEITLEQFEIWAIDRLKILLEIESCLSRNKSIKEIETIIKPQFQKLLPF 116
Query: 78 HPEASEDVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKRALMEEFD 137
+ E+ ED KD SHF+LRL +CR+++LR+ F+ ET L++ RF + +S + ++ D
Sbjct: 117 NTESLEDRKKDYYSHFILRLCFCRSKELREKFVRAETFLFKIRFNMLTSTDQTKFVQSLD 176
Query: 138 LPC-KAISRTEFENAKEKLEQ-VARSFDQPLPTADA----------IFYKVPFEEVPELV 185
LP + IS E +L Q V+ S L + F K+PFE V ELV
Sbjct: 177 LPLLQFISNEEKAELSHQLYQTVSASLQFQLNLNEEHQRKQYFQQEKFIKLPFENVIELV 236
Query: 186 AGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEA 245
R V++ G+AY+ Q ++L+ +F S L++ LI T + R E DRL PI+
Sbjct: 237 GNRLVFLKDGYAYLPQFQQLNLLSNEFASKLNQELIKT---YQYLPRLNEDDRLLPILNH 293
Query: 246 LSMSYLGPDYSQTK--EFGEISIKDLDQLA------RSSFPLCMRHLFDKLREDHHLKHG 297
LS Y D++Q K +F E +++ + S++PLC+++L + L+++HHL++
Sbjct: 294 LSSGYTIADFNQQKANQFSENVDDEINAQSVWSEEISSNYPLCIKNLMEGLKKNHHLRYY 353
Query: 298 GRMQLGLFLKGVGLRMEDALAFWKAEFSQ--KVGAERFDKEYAYSIRHNYGKEGKRTDYT 355
GR QL LFLKG+GL ++AL FW F++ + E+F+KEY YS RHNYG EG R +Y
Sbjct: 354 GRQQLSLFLKGIGLSADEALKFWSEAFTRNGNMTMEKFNKEYRYSFRHNYGLEGNRINYK 413
Query: 356 PYSCQKIISST-PGVGDHHGCPYRHFSEENLRAALGRMGVGSRAMEDVVDKVRNRHYQLA 414
P+ C I+S PG GD+HGCP+R +S E L A L M + + V+D + Y +A
Sbjct: 414 PWDCHTILSKPRPGRGDYHGCPFRDWSHERLSAELRSMKLTQAQIISVLDSCQKGEYTIA 473
Query: 415 CTLTFEAVHSSSC-------DAGINHPNQYFSDS 441
CT FE H+S+ I HPN YF S
Sbjct: 474 CTKVFEMTHNSASADLEIGEQTHIAHPNLYFERS 507
>gi|307182726|gb|EFN69850.1| DNA primase large subunit [Camponotus floridanus]
Length = 571
Score = 285 bits (730), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 170/460 (36%), Positives = 249/460 (54%), Gaps = 34/460 (7%)
Query: 15 NDSVSTLPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARG--KRPEEMENLVRD-- 70
ND + +Y P E+ LE+F+ DRL+ L+ + R K E+ + + D
Sbjct: 20 NDYPHDIQMYNVPPVGEMSLEEFQELGFDRLKALRLVETTNCRSDLKTLEDRKKALCDSL 79
Query: 71 ----------LWKANMRHPEASEDVN---KDIISHFVLRLVYCRTEDLRKWFLSMETALY 117
L A+ +P++ E + KD ISHF+LRLVYC + KWF++ E +
Sbjct: 80 KSDGLKYYANLLYADGSNPQSEEHLQTRKKDHISHFILRLVYCHDIEQSKWFINQEVEFF 139
Query: 118 RYRFLLGSSEAKRALMEEFDLPCKAISRTEFENAKEKLEQVARSFDQPLPTADAI-FYKV 176
+ RF + L+ +L C IS+ E KE+L + + D + YKV
Sbjct: 140 KLRFSSLEKKGIEYLLNISNLDCLPISQNEKLEMKEELSLSSGK----VTNIDIVDIYKV 195
Query: 177 PFEEVPELVAGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWT-STIREQE 235
PFE+V +LV GR++Y+ G AYV + S+ + FR NL L N K I + E
Sbjct: 196 PFEKVIDLVRGRKIYLKAGMAYVTHMDLSSVFICYFRENLIAGL--ENAKMLYDNISDDE 253
Query: 236 RDRLTPIVEALSMSYLGPD---YSQTKEFGEISIKDLDQLARSSFPLCMRHLFDKLREDH 292
R LT + L ++ G +S T I L L+++S+PLCMR L + L +
Sbjct: 254 R--LTRYLTGLPSAFSGMARVVWSTTT----TPIDKLHDLSKTSYPLCMRTLHEALCTNS 307
Query: 293 HLKHGGRMQLGLFLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRT 352
HL++ GRMQ GLFLKG+G+ +EDAL FW+ FS+K FDK+YAYSIRH YGKEG++T
Sbjct: 308 HLRNSGRMQYGLFLKGIGVTLEDALHFWRDAFSKKTDGSAFDKKYAYSIRHYYGKEGRQT 367
Query: 353 DYTPYSCQKIISSTPGVGDHHGCPYRHFSEENLRAALGRMGVGSRAMEDVVDKVRNRHYQ 412
+YTPY CQKIISS+ G G++HGCP+RH ++L L GV + M +++D ++ Y
Sbjct: 368 NYTPYGCQKIISSSVGPGEYHGCPFRHMDRDSLCQKLTSYGVFASNMTEILDFAKDAQYH 427
Query: 413 LACTLTFEAVHSSSCDAGINHPNQYFSDSHKILQPKNNNA 452
LAC FE +H+ + HPN YF++S I ++N
Sbjct: 428 LACAKYFEVIHNKPASKPLLHPNAYFAESRAISTEDDSNG 467
>gi|195378729|ref|XP_002048134.1| GJ13794 [Drosophila virilis]
gi|194155292|gb|EDW70476.1| GJ13794 [Drosophila virilis]
Length = 533
Score = 285 bits (729), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 159/448 (35%), Positives = 255/448 (56%), Gaps = 25/448 (5%)
Query: 23 LYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKR--PEEMENLV-----RDLWKAN 75
LY Y P ++ +++FE A++RLR+L+ A +G R E+ + V RD +
Sbjct: 30 LYHYPPTEDIHIDEFEELALERLRLLRVFDRATTKGLRLLSEDWKEYVNSEMSRDGLRGY 89
Query: 76 MRHPEASEDVN---------KDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSS 126
+R S + +D +SHF+LRL YCR+EDL +WF++ E ++Y+F ++
Sbjct: 90 LRMGTTSSGIKHESDLQMRRRDYLSHFILRLAYCRSEDLLRWFVAREMEFFKYKFAALNT 149
Query: 127 EAKRALMEEFDLPCKAISRTEFENAKEKLEQVARSFDQPLPTADAI-FYKVPFEEVPELV 185
+ +E ++ + + K+ L + + Q + + + FYKVPF +V +LV
Sbjct: 150 AEIKQFLEANSFHILPLTEEQKDEVKDGLYE--STVGQSVSKIELLEFYKVPFTQVLDLV 207
Query: 186 AGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERD-RLTPIVE 244
RR Y+ G AYV H +VS+V + + + + + S I + E D R++ +++
Sbjct: 208 RTRRCYLKAGFAYVNTHDMVSIVGARQLDEIERGM----QAAKSFIADVEADERISRMIK 263
Query: 245 ALSMSYLGPDYSQTKEFGEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGL 304
+L SY G DY+ K+ + I+ LDQL+++S PLCMR + +R HH+KHGGRMQ GL
Sbjct: 264 SLHNSYTGKDYTVCKD-ASVPIESLDQLSKTSMPLCMRMCHEHIRSQHHIKHGGRMQYGL 322
Query: 305 FLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQKIIS 364
FLKG+G+ +ED+L FW+ EF++K+ ++F + Y Y+I HNYGK+G +YTPYSC KII
Sbjct: 323 FLKGIGVTLEDSLRFWREEFTKKMDVDKFARSYEYNIYHNYGKKGSMVNYTPYSCLKIIK 382
Query: 365 STPGVGDHHGCPYRHFSEENLRAALGRMGVGSRAMEDVVDKVRNRHYQLACTLTFEAVHS 424
GD HGCPY+ + L+A L G+ A+++++ V HYQ AC F H+
Sbjct: 383 EMAAPGDCHGCPYKSLDQTALKAKLSSYGLSPGAIDEIMFFVSRNHYQFACGKYFMLTHN 442
Query: 425 SSCDAGINHPNQYFSDSHKILQPKNNNA 452
S+ + INHPN YF +S ++ + A
Sbjct: 443 STVEPTINHPNNYFEESQILMGNRQKRA 470
>gi|322793668|gb|EFZ17106.1| hypothetical protein SINV_80078 [Solenopsis invicta]
Length = 566
Score = 285 bits (728), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 167/454 (36%), Positives = 250/454 (55%), Gaps = 30/454 (6%)
Query: 12 NTPNDSVSTLPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARG--KRPEEMENLVR 69
+T ND + +Y +P E+ LE+F+ DRL+ L+ I R K E+ + +
Sbjct: 17 STNNDYPHDIQMYDVSPVGEMSLEEFQELGFDRLKALRLIETMNCRSDLKTLEDRKKALC 76
Query: 70 DLWKA---------------NMRHPEASEDVNKDIISHFVLRLVYCRTEDLRKWFLSMET 114
D K+ N + E S+ KD ISHF+LRLVYC ++ KWF++ E
Sbjct: 77 DSLKSDGLKYYANLLYADGSNPQSEEHSQTRKKDHISHFILRLVYCHNDEQAKWFINQEV 136
Query: 115 ALYRYRFLLGSSEAKRALMEEFDLPCKAISRTEFENAKEKLEQVARSFDQPLPTADAIFY 174
++ RF + L+ +L C IS+ E KE+L + + D Y
Sbjct: 137 EFFKLRFSSLDKKGIEYLLNISNLDCIPISQDEKFEVKEELSWSSGKVTN-IDITD--IY 193
Query: 175 KVPFEEVPELVAGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQ 234
KVPF++V +L+ GR+VY+ G AY+ + S+ V+ FR +L+ L T + I +
Sbjct: 194 KVPFDKVLDLIKGRKVYLKAGMAYITHMDLSSVFVSYFRQHLAAGL-ETAKIMYDNISDD 252
Query: 235 ERDRLTPIVEALSMSYLGPD---YSQTKEFGEISIKDLDQLARSSFPLCMRHLFDKLRED 291
ER LT + L ++ G +S T I L+ LA+SS+PLCMR L + L +
Sbjct: 253 ER--LTKYLTGLPSAFSGMTRVVWSTTA----TPIDKLNDLAKSSYPLCMRTLHEALLTN 306
Query: 292 HHLKHGGRMQLGLFLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKR 351
+HLK+ GRMQ GLFLKG+G+ +EDAL FW+ FS+K F+K+YAYSIRH +GKEGK+
Sbjct: 307 NHLKNSGRMQYGLFLKGLGVTLEDALRFWRDAFSKKYDGVAFEKKYAYSIRHYFGKEGKQ 366
Query: 352 TDYTPYSCQKIISSTPGVGDHHGCPYRHFSEENLRAALGRMGVGSRAMEDVVDKVRNRHY 411
T+YTP+ C KIISS+ G G++HGCP+RH ++L L G+ + M +++D ++ Y
Sbjct: 367 TNYTPFGCSKIISSSVGPGEYHGCPFRHMDRDSLCQKLTSYGIFASNMTEILDLAKDGQY 426
Query: 412 QLACTLTFEAVHSSSCDAGINHPNQYFSDSHKIL 445
LAC FE +H + HPN Y+++S IL
Sbjct: 427 HLACAKYFEVMHKKPASKPLLHPNAYYAESRAIL 460
>gi|320580215|gb|EFW94438.1| Subunit of DNA primase [Ogataea parapolymorpha DL-1]
Length = 705
Score = 285 bits (728), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 169/475 (35%), Positives = 257/475 (54%), Gaps = 64/475 (13%)
Query: 21 LPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEEME----NLVRDLWKANM 76
L Y+ P E+ LE+FE +A+DRL+V+ + ++RGK +++E L+ L N+
Sbjct: 44 LSFYKVPPFEEITLEEFETWAIDRLKVVLELESCVSRGKSFKDIEIIMKPLLSKLLPMNL 103
Query: 77 RHPEASE---DVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKRALM 133
+ E++ + KD SHF+LRL +CR+E+LR F+ ET L+R RF + S + ++ +
Sbjct: 104 PNRESTSLYLERKKDHYSHFILRLAFCRSEELRSRFIRAETLLFRLRFNMMSIQEQKDFV 163
Query: 134 EEFDLPCKAISR-------------------------TEFENAKEKLEQVARSFDQPLPT 168
DLP + +S E++ K+ ++ R+F
Sbjct: 164 ASLDLPWETVSEEEKQEFQSELMACCYNTARSILTQTVEYQRTKKVTDEQVRAF-----L 218
Query: 169 ADAIFYKVPFEEVPELVAGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWT 228
A FYK+PFE VPELV+ R+ ++ +G A+VA Q +SL++T+F +L++ L +T R
Sbjct: 219 AAEKFYKIPFEFVPELVSTRQSFLRRGKAFVAQFQQLSLILTEFSKHLAEQLNVTMRALP 278
Query: 229 STIREQERDRLTPIVEALSMSYLGPDY------SQTKEFGEISIKDLDQLARSSFPLCMR 282
+ E DRL P++ LS Y DY S+T + G ++ + + L + PLCM
Sbjct: 279 TL---DEDDRLIPVLNNLSRGYASMDYQSELGGSETND-GSVTAESVPSLMKH-MPLCMN 333
Query: 283 HLFDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWKAEFSQKVGA---ERFDKEYAY 339
L + DHHLK+ GR QL LFLKG+GL E+AL FW+ +F+ G+ ERF+KEY Y
Sbjct: 334 RLMQGVMSDHHLKYQGRQQLSLFLKGIGLSAEEALRFWQIQFTSGPGSMSIERFNKEYKY 393
Query: 340 SIRHNYGKEGKRTDYTPYSCQKIISST-PGVGDHHGCPYRHFSEENLRAALGRMGVGSRA 398
+ RHNYG EG R +Y P+ C+ I+S P ++HGCPYR + L L +MG+ A
Sbjct: 394 TFRHNYGLEGGRINYKPWDCRTILSKPRPSKNEYHGCPYRDLHRDQLADQLQKMGLDQGA 453
Query: 399 -MEDVVDKVRNRHYQLACTLTFEAVHSSSCD-----------AGINHPNQYFSDS 441
++DV++ YQ+ACT FE VH D I HPN Y+S S
Sbjct: 454 RLDDVLELSDRGEYQVACTKVFELVHGEKIDTLLKNGDTVDETSITHPNLYYSRS 508
>gi|332024292|gb|EGI64491.1| DNA primase large subunit [Acromyrmex echinatior]
Length = 567
Score = 284 bits (726), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 166/451 (36%), Positives = 248/451 (54%), Gaps = 30/451 (6%)
Query: 15 NDSVSTLPLYRYAPQLEVRLEDFEVFAMDRLRVLKGI------SDALARGKRPEEMENLV 68
ND + +Y P E+ LE+F+ DRL+VL+ + SD + R + + +
Sbjct: 20 NDYPHDIQMYDVPPVGEISLEEFQELGFDRLKVLRLVETTNCRSDLKTQEDRKKAFADCL 79
Query: 69 R--------DLWKANMRHPEASEDVN---KDIISHFVLRLVYCRTEDLRKWFLSMETALY 117
+ +L A+ +P+A E KD ISHF+LRLVYC + KWFL+ E +
Sbjct: 80 KSDGLKYYANLLCADGSNPQAEEHSQIRRKDHISHFILRLVYCHNIEQTKWFLNQEVEFF 139
Query: 118 RYRFLLGSSEAKRALMEEFDLPCKAISRTEFENAKEKLEQVARSFDQPLPTADAIFYKVP 177
+ RF + L+ ++ C IS+ E KE+L + AD YKVP
Sbjct: 140 KLRFSSLDKKGIERLLNITNMDCILISQDEKFEMKEELSSSCGKVTN-IDIAD--IYKVP 196
Query: 178 FEEVPELVAGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERD 237
FE+V +L+ GR+VY+ G AY+ + S+ V+ + NL L + + I + ER
Sbjct: 197 FEKVCDLIRGRKVYLKAGMAYITHMDLSSVFVSYLKENLVTGL-ESAKILYDNISDDER- 254
Query: 238 RLTPIVEALSMSYLGPD---YSQTKEFGEISIKDLDQLARSSFPLCMRHLFDKLREDHHL 294
LT + L ++ G +S T I L+ L++ S+PLCMR L + L + HL
Sbjct: 255 -LTKYLTGLPSAFSGMARVVWSTTA----TPIDKLNDLSKISYPLCMRTLHEALCTNSHL 309
Query: 295 KHGGRMQLGLFLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTDY 354
++ GRMQ GLFLKG+G+ +EDAL FW+ FS+K F+K+YAYS+RH +GKEGK+T+Y
Sbjct: 310 RNSGRMQYGLFLKGIGVTLEDALRFWRDAFSKKADGVAFEKKYAYSVRHYFGKEGKQTNY 369
Query: 355 TPYSCQKIISSTPGVGDHHGCPYRHFSEENLRAALGRMGVGSRAMEDVVDKVRNRHYQLA 414
TPY CQKIISS+ G G++HGCP+RH ++L L GV + M +++D ++ Y LA
Sbjct: 370 TPYGCQKIISSSVGPGEYHGCPFRHMDRDSLCQKLTSCGVFASNMTEILDLTKDGQYHLA 429
Query: 415 CTLTFEAVHSSSCDAGINHPNQYFSDSHKIL 445
C FE +H+ + HPN YF++S IL
Sbjct: 430 CAKYFEVMHNKPASKPLLHPNAYFAESRAIL 460
>gi|323354101|gb|EGA85947.1| Pri2p [Saccharomyces cerevisiae VL3]
Length = 545
Score = 284 bits (726), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 167/457 (36%), Positives = 256/457 (56%), Gaps = 34/457 (7%)
Query: 19 STLPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEEMENLVRDLWKANMR- 77
S L Y PQ E+ LE FE++A+DRL++L I L+R K +E+E +++ ++ +
Sbjct: 57 SKLSFYDLPPQGEITLEQFEIWAIDRLKILLEIESCLSRNKSIKEIETIIKPQFQKLLPF 116
Query: 78 HPEASEDVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKRALMEEFD 137
+ E+ ED KD SHF+LRL +CR+++LR+ F+ ET L++ RF + +S + ++ D
Sbjct: 117 NTESLEDRKKDYYSHFILRLCFCRSKELREKFVRAETFLFKIRFNMLTSTDQTKFVQSLD 176
Query: 138 LPC-KAISRTEFENAKEKLEQ-VARSFDQPLPTADA----------IFYKVPFEEVPELV 185
LP + IS E +L Q V+ S L + F K+PFE V ELV
Sbjct: 177 LPLLQFISNEEKAELSHQLYQTVSASLQFQLNLNEEHQRKQYFQQEKFIKLPFENVIELV 236
Query: 186 AGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEA 245
R V++ G+AY+ Q ++L+ +F S L++ LI T + R E DRL PI+
Sbjct: 237 GNRLVFLKDGYAYLPQFQQLNLLSNEFASKLNQELIKT---YQYLPRLNEDDRLLPILNH 293
Query: 246 LSMSYLGPDYSQTK--EFGEISIKDLDQLA------RSSFPLCMRHLFDKLREDHHLKHG 297
LS Y D++Q K +F E +++ + S++PLC+++L + L+++HHL++
Sbjct: 294 LSSGYTIADFNQQKANQFSENVDDEINAQSVWSEEISSNYPLCIKNLMEGLKKNHHLRYY 353
Query: 298 GRMQLGLFLKGVGLRMEDALAFWKAEFSQ--KVGAERFDKEYAYSIRHNYGKEGKRTDYT 355
GR QL LFLKG+GL ++AL FW F++ + E+F+KEY YS RHNYG EG R +Y
Sbjct: 354 GRQQLSLFLKGIGLSADEALKFWSEAFTRNGNMTMEKFNKEYRYSFRHNYGLEGNRINYK 413
Query: 356 PYSCQKIISST-PGVGDHHGCPYRHFSEENLRAALGRMGVGSRAMEDVVDKVRNRHYQLA 414
P+ C I+S P GD+HGCP+R +S E L A L M + + V+D + Y +A
Sbjct: 414 PWDCHTILSKPRPXRGDYHGCPFRDWSHERLSAELRSMKLTQAQIISVLDSCQKGEYTIA 473
Query: 415 CTLTFEAVHSSSC-------DAGINHPNQYFSDSHKI 444
CT FE H+S+ I HPN YF S ++
Sbjct: 474 CTKVFEMTHNSASADLEIGEQTHIAHPNLYFERSRQL 510
>gi|255713550|ref|XP_002553057.1| KLTH0D07920p [Lachancea thermotolerans]
gi|238934437|emb|CAR22619.1| KLTH0D07920p [Lachancea thermotolerans CBS 6340]
Length = 506
Score = 283 bits (724), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 164/457 (35%), Positives = 256/457 (56%), Gaps = 36/457 (7%)
Query: 19 STLPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEEMENLVRDLWKANMRH 78
S L Y P+ E+ LE FE++A+DRL+VL I + R K +E+E +V+ L + +
Sbjct: 46 SKLSFYEVPPKGEITLEQFELWAIDRLKVLLEIESCVQRNKTAKEIEIIVKPLLQKLL-- 103
Query: 79 PEASEDVN---KDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKRALMEE 135
P +ED+ KD SHF+LRL +CR+++LR+ F+ ET L + RF + +S + ++
Sbjct: 104 PFTTEDLQDRKKDYYSHFILRLCFCRSKELREKFIRSETMLLKLRFNMMTSRDQAKFVQT 163
Query: 136 FDLP-CKAISRTEFENAKEKLEQ-VARSFDQPLPTADAI----------FYKVPFEEVPE 183
+LP + IS E E +L Q ++ S L D F K+PFE V E
Sbjct: 164 LNLPFLQFISDEEKEQLSTQLYQTISSSLQFQLNLTDETARRQYFEQEKFIKLPFESVIE 223
Query: 184 LVAGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIV 243
LV R+V+I KG+AY+ Q ++ + +F + LS AL T + + R E DRL PI+
Sbjct: 224 LVGARQVFIKKGYAYLPQFQQLNHIANEFANMLSLALTKT---YQTIPRLNEDDRLLPIL 280
Query: 244 EALSMSYLGPDYSQTKEFGEISIKDLDQLA------RSSFPLCMRHLFDKLREDHHLKHG 297
LS Y ++ Q +FG+ S +++ + + +FPLC ++L L+E+HHL++
Sbjct: 281 HHLSTGYTITNFQQHDQFGQASQGEINAKSVYSSAIQENFPLCAKNLMSGLKENHHLRYQ 340
Query: 298 GRMQLGLFLKGVGLRMEDALAFWKAEFSQ--KVGAERFDKEYAYSIRHNYGKEGKRTDYT 355
GR QL FLKG+G+ +++AL FW F+ ++ E+F+KEY Y+ RHNYG EG R +Y
Sbjct: 341 GRQQLSFFLKGIGMDVDEALQFWSDAFTSGGQMTQEKFNKEYRYNFRHNYGLEGNRINYK 400
Query: 356 PYSCQKIISST-PGVGDHHGCPYRHFSEENLRAALGR-MGVGSRAMEDVVDKVRNRHYQL 413
P+ C+ I+S P G++HGCPYR ++ + L L + M + + V+D V+ Y +
Sbjct: 401 PWDCRTILSRPRPSRGEYHGCPYRDWNVDKLTLELSQGMSLNPSQVTSVLDSVQRTEYTI 460
Query: 414 ACTLTFEAVHSSSCDAGIN------HPNQYFSDSHKI 444
ACT FE H S + IN HPN Y+ S ++
Sbjct: 461 ACTKVFEMTHGGSANTEINDQSHIAHPNLYYERSRQL 497
>gi|378734066|gb|EHY60525.1| DNA primase large subunit [Exophiala dermatitidis NIH/UT8656]
Length = 503
Score = 283 bits (724), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 175/459 (38%), Positives = 250/459 (54%), Gaps = 45/459 (9%)
Query: 21 LPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEE----MENLVRDLWKANM 76
L Y P E+ LE+FE++A+DRLR+L I R K P+E +E L++ +
Sbjct: 36 LSFYDVPPTQEISLEEFEIWAIDRLRILAEIETCSFRNKSPQETATHLEPLLKKYLPLSS 95
Query: 77 RHPEASEDVN--------KDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEA 128
A V+ KD SHF+LRL +C+TEDLR+ F ET L++ RF S
Sbjct: 96 NSSAAGGVVDGRLRKERRKDHYSHFILRLAFCKTEDLRRRFARAETMLFKLRFQADDSRE 155
Query: 129 KRALMEEFDLPCKAISRTEFENAKEKLEQVARSFDQPLPTADAIFYKVPFEEVPELVAGR 188
+RA +E +L + +S E +E EQ+ + + ++KV + VPELV R
Sbjct: 156 RRAFIESLNLSWEVVSE---EEKRELGEQLLAATPGLRRLEEESWFKVDWTRVPELVEHR 212
Query: 189 RVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEALSM 248
V + KG AYV M + S+V+T+F + L KAL LT R R E DRLTPI++ S
Sbjct: 213 TVLVRKGKAYVPMREQTSMVLTEFSNRLEKALELTAR---IRPRLDEDDRLTPILDHFSK 269
Query: 249 SYLGPDYSQTKEFGE-----ISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLG 303
++ PD ++ G I+ ++D L++ FPLCM+HL LR++ HLKH GR+Q
Sbjct: 270 NFATPDAGFSESDGALAGAPITAANIDALSQH-FPLCMKHLHQTLRKNSHLKHFGRLQYT 328
Query: 304 LFLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTD-----YTPYS 358
LFLKG+GL +E+ L FW+ F + + ++F+KEY Y++RH+YG G + Y PYS
Sbjct: 329 LFLKGIGLSLEECLIFWRQSF-KNITDDQFNKEYRYNVRHSYGDVGGDANRRGRGYAPYS 387
Query: 359 CQKIISS-TPGVGDHHGCPYRHFSEENLRAALGRMGVGSR-AMEDVVDKVRNRHYQLACT 416
CQKI++ PG G+ HGCPYRHFS +NL + L GV R + V + V + Y +AC
Sbjct: 388 CQKILTEHPPGTGEAHGCPYRHFSIDNLTSLLQATGVHDRDVLRGVKEDVEKKRYHIACN 447
Query: 417 LTFEAVHSSSC----DAG---------INHPNQYFSDSH 442
FE H + D G I HPN YF S+
Sbjct: 448 RVFEWAHRAEIKKVKDEGIWGPAELETIVHPNTYFKRSY 486
>gi|395534405|ref|XP_003769232.1| PREDICTED: DNA primase large subunit-like, partial [Sarcophilus
harrisii]
Length = 355
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 139/275 (50%), Positives = 181/275 (65%), Gaps = 6/275 (2%)
Query: 174 YKVPFEEVPELVAGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIRE 233
YKVPF + +L GR+VY+ G A+V +VS+++ FR+ LSKAL LT R S
Sbjct: 31 YKVPFADALDLFRGRKVYLEHGFAFVPHQDIVSIILNDFRAKLSKALALTARSLPSV--- 87
Query: 234 QERDRLTPIVEALSMSYLGPDYSQTKEFGEISIKDLDQLARSSFPLCMRHLFDKLREDHH 293
Q +RL P++ LS SY+G DY+ G+IS+ LD LA SFPLCMR L LRE HH
Sbjct: 88 QSDERLQPLLNHLSHSYVGQDYNAQANMGKISLDQLDSLAVKSFPLCMRQLHKALREHHH 147
Query: 294 LKHGGRMQLGLFLKGVGLRMEDALAFWKAEFSQ-KVGAERFDKEYAYSIRHNYGKEGKRT 352
L+HGGRMQ GLFLKG+GL +E AL FWK EF + KV ++FDK YAY+IRH+YGKEGKRT
Sbjct: 148 LRHGGRMQYGLFLKGIGLTLEQALQFWKLEFIKGKVDTDKFDKGYAYNIRHSYGKEGKRT 207
Query: 353 DYTPYSCQKII-SSTPGVGDHHGCPYRHFSEENLRAALGRMGVGSRAMEDVVDKVRNRHY 411
DYTP+SC KII ++ P GD+HGCP+RH E L+ L + + ++D ++ HY
Sbjct: 208 DYTPFSCMKIILTNPPSQGDYHGCPFRHSDPELLKQRLQSSKISQTGINQILDYIKGTHY 267
Query: 412 QLACTLTFEAVHSSSCDA-GINHPNQYFSDSHKIL 445
QLAC F+ H+ +NHPNQYF +S K+L
Sbjct: 268 QLACQKFFDLTHNVEDGMFSLNHPNQYFFESQKLL 302
>gi|312378332|gb|EFR24941.1| hypothetical protein AND_10165 [Anopheles darlingi]
Length = 575
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 151/445 (33%), Positives = 245/445 (55%), Gaps = 22/445 (4%)
Query: 23 LYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKR--PEEMENLV------------ 68
Y P +++ +EDFE A++RL++L+ + A+ + PE V
Sbjct: 30 FYLIPPIVDLTIEDFEKLALERLKMLRLLEQVAAKNPKATPEAWREAVLAEVNHDGLRMY 89
Query: 69 RDLWKANMRHPEASEDVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEA 128
L++ N+ +D +SHF+LR YCR+E+LR+WF++ E L+R +F S+
Sbjct: 90 AKLFRGNINDDATKMARRRDYLSHFILRFAYCRSEELRRWFIAREMELFRLKFSALSARD 149
Query: 129 KRALMEEFDLPCKAISRTEFENAKEKL-EQVARSFDQPLPTADAIFYKVPFEEVPELVAG 187
+ +E ++L ++ E E+L A + T+D FY V F EV LV
Sbjct: 150 IKEFLEVYELDYSPLADAEKAEISEQLCMSTANQTRLKMETSD--FYAVHFTEVLNLVRD 207
Query: 188 RRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEALS 247
R+ ++ G AY+ V +V + + + L + + T+ ER + +++++
Sbjct: 208 RKCFLKGGKAYIPPESFVHVVARKHQQLIEDGL-KAHLRMLPTLEIDER--FSMLLKSIH 264
Query: 248 MSYLGPDYSQTKEFGEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLK 307
SY G +Y+ +K + I+ +DQL++ SFPLCMRH+ D LR HH+KH GRMQ LFLK
Sbjct: 265 TSYTGKNYTVSKT-DSVPIESIDQLSKKSFPLCMRHVHDTLRATHHIKHTGRMQYTLFLK 323
Query: 308 GVGLRMEDALAFWKAEFSQ-KVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQKIISST 366
+G+ M+D + FW+ E ++ K+ E+F+KEYAY+IRHNYGKEG R +Y+P+SC K+I+
Sbjct: 324 AIGVTMDDCVRFWREELTRGKIPIEKFEKEYAYNIRHNYGKEGSRVNYSPFSCMKVITQA 383
Query: 367 PGVGDHHGCPYRHFSEENLRAALGRMGVGSRAMEDVVDKVRNRHYQLACTLTFEAVHSSS 426
G D HGCP+++ L+ L G+ + ++V HYQ+AC FE +H +
Sbjct: 384 IGPADTHGCPFKNLDASALKIKLSGYGLSALDCDEVAGYAAKGHYQIACGKYFETLHETK 443
Query: 427 CDAGINHPNQYFSDSHKILQPKNNN 451
+ GINHPNQYF S ++ ++
Sbjct: 444 LEEGINHPNQYFELSQLTMEGRSTT 468
>gi|406697059|gb|EKD00328.1| hypothetical protein A1Q2_05386 [Trichosporon asahii var. asahii
CBS 8904]
Length = 512
Score = 282 bits (722), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 166/459 (36%), Positives = 258/459 (56%), Gaps = 27/459 (5%)
Query: 11 TNTPNDSVSTLPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEEMENLVRD 70
T +P D T Y P L++ L++FE+ A+ RLRVL + R P + + +
Sbjct: 48 TISPRDPADTTS-YTQPPLLDITLDEFELSALARLRVLSHLEALQHRNFPPAQFQQALAT 106
Query: 71 LWKANM-------RHPEASEDVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLL 123
K ++ R + + +D I H+VLRL + R+ +LR F+ ETAL+++RF
Sbjct: 107 YTKEHLPLASNTARSADHEAERRRDEIGHWVLRLAFARSPELRARFVRAETALFKHRFEG 166
Query: 124 GSSEAKRALMEEFDLPCKAISRTEFENAKEKLEQVARSFDQPLPTADAIFYKVPFEEVPE 183
+ + A + + L + E ++L ++ + D ++KVP+ +VP+
Sbjct: 167 DDAAERAAFLADLRLDWVMVGPEEKSRLGKELMSCLWGKERQMDLKDLEWFKVPWTQVPD 226
Query: 184 LVAGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIV 243
L+A R+VY+ G AYV ++LV+ F S L AL LT+R R E DRL P+V
Sbjct: 227 LIATRKVYVSGGTAYVPQSLQIALVLQAFASRLEAALELTSRH---IPRLDEDDRLGPVV 283
Query: 244 EALSMSYL----GPDYSQTKEFGEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGR 299
E L+ S++ G DY E ++ + +D L+R FP CM +L+ L+ HHLKH GR
Sbjct: 284 EHLASSFMAGLAGSDYVSNGE-AAVTAEMVDGLSRH-FPPCMLNLYLHLKSAHHLKHFGR 341
Query: 300 MQLGLFLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSC 359
+QLGLFLKGVGL +E+AL FW+ ++ + ++F+KEY Y+IRH+YG+EGKR +Y P +C
Sbjct: 342 LQLGLFLKGVGLPLEEALIFWRRAYAPAISDDKFNKEYRYNIRHSYGQEGKRANYPPKNC 401
Query: 360 QKIIS-STPGVGDHHGCPYRHFSEENLRAALG---RMGVGSRAMEDVVDKVRNRHYQLAC 415
Q+I++ + PG D+HGCP+RHFS +NL + L ++ G M +++D V+ HY +AC
Sbjct: 402 QQILTQNQPGTQDNHGCPFRHFSTDNLTSFLVTNYKLDRGGPEMREIMDSVKKNHYHVAC 461
Query: 416 TLTFEAVHSSSCDAGI------NHPNQYFSDSHKILQPK 448
T FE H GI +HPN+Y S +I + K
Sbjct: 462 TRLFEVTHGVKKGDGIGNGESVSHPNKYTDRSREIEKEK 500
>gi|255935465|ref|XP_002558759.1| Pc13g03210 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211583379|emb|CAP91390.1| Pc13g03210 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 501
Score = 282 bits (721), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 173/472 (36%), Positives = 252/472 (53%), Gaps = 52/472 (11%)
Query: 16 DSVSTLPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEEMENLVRDLWK-- 73
D L +Y P E+ LE FE +A+DRL++L I R K P E E+ + L +
Sbjct: 33 DYAHRLNIYEIPPTAEITLEQFEQWAIDRLKILAEIEACSYRNKSPAETESYITPLLQKF 92
Query: 74 ----ANMRHPEASEDV------NKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLL 123
+N P + D KD SHF+LRL + TEDLR+ F ET L+++RF
Sbjct: 93 LPLSSNTSSPSGAADPRLKNERQKDHYSHFILRLAFSATEDLRRRFARAETMLFKFRFQK 152
Query: 124 GSSEAKRALMEEFDLPCKAISRTEFENAKEKLEQVARSFDQPLPT----ADAIFYKVPFE 179
+ KRA ++ +L + + +FE ++A++ P D +YKV +E
Sbjct: 153 DDTREKRAFIDSLNLDWEPVG--DFEKT-----EIAKNLLSSTPGLRGLEDETWYKVDWE 205
Query: 180 EVPELVAGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRL 239
+VPELV R +++ KG AYV + +S++V +F + L +AL LT+R + R E DRL
Sbjct: 206 KVPELVERRSIFLKKGKAYVPGREQLSMIVAEFTARLERALELTSR---ALPRLDEDDRL 262
Query: 240 TPIVEALSMSYLGPD--YSQTKEF---GEISIKDLDQLARSSFPLCMRHLFDKLREDHHL 294
TPI+ LS ++ + YS+ + + I+ +DQLA+ FPLCM+ L LR+++HL
Sbjct: 263 TPILNHLSKNFGSAESVYSEGEGYVDGSPITASSIDQLAQQHFPLCMKSLHVNLRKNNHL 322
Query: 295 KHGGRMQLGLFLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTD- 353
KH GR+Q LFLKG+GL +E+ + FW+ F K E F+ +Y Y+IRH YG+ G +
Sbjct: 323 KHFGRLQYTLFLKGIGLSLEECILFWRQSFKGKTDDE-FNSQYKYNIRHAYGEVGGDVNR 381
Query: 354 ----YTPYSCQKIIS-STPGVGDHHGCPYRHFSEENLRAALGRMGVGSR-AMEDVVDKVR 407
YTPYSCQKI+ S PG+G HGCPYRH+S +NL L GV + + V + V
Sbjct: 382 RGKGYTPYSCQKILGDSNPGIGQTHGCPYRHYSVDNLVGFLQATGVSDKEVLRGVREDVG 441
Query: 408 NRHYQLACTLTFEAVHSSSCDA-------------GINHPNQYFSDSHKILQ 446
Y +AC FEA H + I HPN YF S+ + Q
Sbjct: 442 KMRYHIACNRVFEATHKNEIKKVKEDGSWSQTDLDTIVHPNTYFKRSYLLKQ 493
>gi|392578044|gb|EIW71172.1| hypothetical protein TREMEDRAFT_60105 [Tremella mesenterica DSM
1558]
Length = 500
Score = 281 bits (720), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 155/439 (35%), Positives = 245/439 (55%), Gaps = 26/439 (5%)
Query: 21 LPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEEMENLVRDLWKANM---- 76
+P Y P L++ +++FE FA+ RLRVL I R ++ + V K ++
Sbjct: 57 IPSYSKPPSLDITIDEFESFAIARLRVLSYIESLSHRSLPYQQFSSTVATYLKQHLPLAS 116
Query: 77 ---RHPEASEDVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKRALM 133
R+ + + KD I H+VLRL +CR+ DLR F+ E AL+++RF + +
Sbjct: 117 NTARNVDLEAERRKDEIGHWVLRLAFCRSPDLRARFVRSEVALFKHRFETDDFVERADFL 176
Query: 134 EEFDLPCKAISRTEFENAKEKLEQVARSFDQPLPTADAIFYKVPFEEVPELVAGRRVYIH 193
+ + TE + +L + ++ ++KVP+ VP+LV RRV+I
Sbjct: 177 RSLKFDWELVDETEKMSLASQLRTCLGQGKEDTFKVES-WFKVPWWTVPDLVGSRRVFIK 235
Query: 194 KGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEALSMSYLG- 252
G AYV +SLV+ F L +AL +T + + R E +RL P++E L+ S+L
Sbjct: 236 GGMAYVPQSLQLSLVLQAFAMRLERALEITAK---NLPRLDEDERLGPVIEHLAASFLSG 292
Query: 253 ---PDYSQTKEFGEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGV 309
D+ ++ ++ + +D +AR FP CMR+L+D+L+ D HLKH GR+QLGLFLKG+
Sbjct: 293 IGTSDFQPSENNAAVTAEMVDDVARKHFPPCMRNLYDRLKRDSHLKHFGRLQLGLFLKGI 352
Query: 310 GLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQKIIS-STPG 368
GL +++A+ FW+ + + ++F+KEY Y+IRH YG+EGKRT+Y P SCQ+I++ + PG
Sbjct: 353 GLPLDEAIVFWRKMYGSTMSDDKFNKEYKYNIRHGYGQEGKRTNYPPRSCQQILTQNQPG 412
Query: 369 VGDHHGCPYRHFSEENLRAAL----GRMGVGSRAMEDVVDKVRNRHYQLACTLTFEAVHS 424
D HGCP+RHFS E L + L + S ++++D V+N HY L+CT FE H
Sbjct: 413 TQDTHGCPFRHFSPETLSSFLLSTYPTLDKSSNDFKEIMDSVKNSHYHLSCTRVFELTHG 472
Query: 425 SSCDAG------INHPNQY 437
G + HPN++
Sbjct: 473 IKKGEGLGNGESVTHPNKW 491
>gi|383857869|ref|XP_003704426.1| PREDICTED: DNA primase large subunit-like [Megachile rotundata]
Length = 555
Score = 281 bits (720), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 159/446 (35%), Positives = 252/446 (56%), Gaps = 32/446 (7%)
Query: 21 LPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGK------RPEEMENLV-RDLWK 73
L +Y + P E+ +F+ M+RL++L+ + +R R + + ++ +D K
Sbjct: 26 LQVYNFPPSGEIPYVEFQQLGMERLKLLQHVESLASRADLKSFDDRKQYLCTILNKDGLK 85
Query: 74 --ANMRHPEASEDVN--------KDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLL 123
A++ + + + N KD ISHF++RL +C D R WF++ E ++ RF
Sbjct: 86 YFAHLLYAKGCKSSNEIELQYRRKDHISHFIMRLAFCFETDHRTWFVNQEVEWFKLRFTS 145
Query: 124 GSSEAKRALMEEFDLPCKAISRTEFENAKEKLEQVARSFDQPLPTADAI-FYKVPFEEVP 182
E L+ D+ C +++ E +E+L RS D + FYKVPF++V
Sbjct: 146 LDKEGIEKLLSMHDINCTQLTQNEKNEIREEL----RSSTGRNVNVDTVEFYKVPFQKVA 201
Query: 183 ELVAGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPI 242
+LV RRVY+ KG A++ ++S+ VT FRS L ++ +R ++ + ER LT
Sbjct: 202 DLVRLRRVYLSKGTAFIPQPDLISVFVTYFRSILLDSMP-ESRFCSANLYGDER--LTSF 258
Query: 243 VEAL--SMSYLGPD-YSQTKEFGEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGR 299
+ +L S P +S T ++ LD+L+++S+PLCMR L D L+ HHL++ GR
Sbjct: 259 LSSLRGCSSNTAPVVWSSTT----TPVQKLDELSKTSYPLCMRTLHDTLKTQHHLRNAGR 314
Query: 300 MQLGLFLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSC 359
+Q GLFLKG+G+ +ED+L FWK EFS+K+ ++F K+YAY IRH YGKEGK+T+YTP C
Sbjct: 315 IQYGLFLKGIGVSLEDSLQFWKTEFSKKIDPDKFGKQYAYGIRHIYGKEGKQTNYTPLGC 374
Query: 360 QKIISSTPGVGDHHGCPYRHFSEENLRAALGRMGVGSRAMEDVVDKVRNRHYQLACTLTF 419
KIISS G++HGCP+RH +E+L+ L G+ + + ++ D ++ Y +AC F
Sbjct: 375 SKIISSAVNAGEYHGCPFRHMDQESLKQKLYSCGIPAPGVNEIADFAKSGDYLIACATYF 434
Query: 420 EAVHSSSCDAGINHPNQYFSDSHKIL 445
H+ I HPN YF++S IL
Sbjct: 435 RITHNQLPSKAIMHPNVYFTESRAIL 460
>gi|365991561|ref|XP_003672609.1| hypothetical protein NDAI_0K01750 [Naumovozyma dairenensis CBS 421]
gi|343771385|emb|CCD27366.1| hypothetical protein NDAI_0K01750 [Naumovozyma dairenensis CBS 421]
Length = 520
Score = 281 bits (719), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 166/468 (35%), Positives = 261/468 (55%), Gaps = 47/468 (10%)
Query: 16 DSV--STLPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEEMENLVRDLWK 73
DS+ S L Y PQ E+ LE FE +A+DRL++L I ++R K +E+E +++ ++
Sbjct: 46 DSIYDSKLSFYTSRPQGEITLEQFETWAVDRLKILLEIESCISRNKSLKEIETIIKPQFQ 105
Query: 74 ANMR-HPEASEDVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKRAL 132
+ + + +D KD SHF+LRL +CRT +LR F+ ET L + RF + +S +
Sbjct: 106 KLLPFNTDDFQDKKKDYYSHFILRLCFCRTNELRDKFIRAETLLLKIRFNMLTSFEQAKF 165
Query: 133 MEEFDLPCKAISRTEFENAKEKLE---------------QVARSFDQ--PLPTADAIFYK 175
++ +L ++ +F + +EK E Q+ S +Q L + F K
Sbjct: 166 VQSLNL-----AKLQFISDEEKNELWKPLYQTVTPALIYQMNLSDEQQRKLFFQNEKFLK 220
Query: 176 VPFEEVPELVAGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQE 235
+PFE V EL+ R+V++ KG+AY+ Q ++L+ T+F + LS +L+ T + R E
Sbjct: 221 LPFENVIELIGNRQVFLRKGYAYLPQFQQLNLIATEFSNQLSDSLLKT---YQYLPRLNE 277
Query: 236 RDRLTPIVEALSMSYLGPDYSQTKEFGEISIKDLDQL---------ARSSFPLCMRHLFD 286
DRL PI+ LS Y D+++ +FG + D++ S++PLC+++LF
Sbjct: 278 DDRLIPILNHLSSGYTVADFNENNKFGMYGEGNDDEINAQSVYSEEISSNYPLCVKNLFY 337
Query: 287 KLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWKAEFSQ--KVGAERFDKEYAYSIRHN 344
L++D HLK+ GR QL LFLKG+GL E++L FW F++ K+ E+F+KEY Y+ RHN
Sbjct: 338 GLKKDGHLKYQGRQQLSLFLKGIGLSAEESLKFWCDAFTKNNKMTVEKFNKEYRYNFRHN 397
Query: 345 YGKEGKRTDYTPYSCQKIISST-PGVGDHHGCPYRHFSEENLRAALGRMGVGSRAMEDVV 403
YG EG R +Y P+ C+ I+S PG G++HGCPYR +S E L A L M + + + ++
Sbjct: 398 YGLEGNRINYKPWDCRTILSKPRPGRGEYHGCPYRDWSSEKLTAELKTMNLTNPQITSIL 457
Query: 404 DKVRNRHYQLACTLTFEAVHSSSC-------DAGINHPNQYFSDSHKI 444
D Y +A T TFE H+ S I+HPN YF S ++
Sbjct: 458 DSCEKGEYTVALTKTFEFTHNISATDLDIDEQTHISHPNLYFERSRQL 505
>gi|401881113|gb|EJT45418.1| hypothetical protein A1Q1_06181 [Trichosporon asahii var. asahii
CBS 2479]
Length = 490
Score = 281 bits (719), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 163/449 (36%), Positives = 254/449 (56%), Gaps = 26/449 (5%)
Query: 21 LPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEEMENLVRDLWKANM---- 76
L Y P L++ L++FE+ A+ RLRVL + R P + + + K ++
Sbjct: 35 LNFYTQPPLLDITLDEFELSALARLRVLSHLEALQHRNFPPAQFQQALATYTKEHLPLAS 94
Query: 77 ---RHPEASEDVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKRALM 133
R + + +D I H+VLRL + R+ +LR F+ ETAL+++RF + + A +
Sbjct: 95 NTARSADHEAERRRDEIGHWVLRLAFARSPELRARFVRAETALFKHRFEGDDAAERAAFL 154
Query: 134 EEFDLPCKAISRTEFENAKEKLEQVARSFDQPLPTADAIFYKVPFEEVPELVAGRRVYIH 193
+ L + E ++L ++ + D ++KVP+ +VP+L+A R+VY+
Sbjct: 155 ADLRLDWVMVGPEEKSRLGKELMSCLWGKERQMDLKDLEWFKVPWTQVPDLIATRKVYVS 214
Query: 194 KGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEALSMSYL-- 251
G AYV ++LV+ F S L AL LT+R R E DRL P+VE L+ S++
Sbjct: 215 GGTAYVPQSLQIALVLQAFASRLEAALELTSRH---IPRLDEDDRLGPVVEHLASSFMAG 271
Query: 252 --GPDYSQTKEFGEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGV 309
G DY E ++ + +D L+R FP CM +L+ L+ HHLKH GR+QLGLFLKGV
Sbjct: 272 LAGSDYVSNGE-AAVTAEMVDGLSRH-FPPCMLNLYLHLKSAHHLKHFGRLQLGLFLKGV 329
Query: 310 GLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQKIIS-STPG 368
GL +E+AL FW+ ++ + ++F+KEY Y+IRH+YG+EGKR +Y P +CQ+I++ + PG
Sbjct: 330 GLPLEEALIFWRRAYAPAISDDKFNKEYRYNIRHSYGQEGKRANYPPKNCQQILTQNQPG 389
Query: 369 VGDHHGCPYRHFSEENLRAALG---RMGVGSRAMEDVVDKVRNRHYQLACTLTFEAVHSS 425
D+HGCP+RHFS +NL + L ++ G M +++D V+ HY +ACT FE H
Sbjct: 390 TQDNHGCPFRHFSTDNLTSFLVTNYKLDRGGPEMREIMDSVKKNHYHVACTRLFEVTHGV 449
Query: 426 SCDAGI------NHPNQYFSDSHKILQPK 448
GI +HPN+Y S +I + K
Sbjct: 450 KKGDGIGNGESVSHPNKYTDRSREIEKEK 478
>gi|365764618|gb|EHN06140.1| Pri2p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 528
Score = 281 bits (719), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 167/454 (36%), Positives = 254/454 (55%), Gaps = 34/454 (7%)
Query: 19 STLPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEEMENLVRDLWKANMR- 77
S L Y PQ E+ LE FE++A+DRL++L I L+R K +E+E +++ ++ +
Sbjct: 57 SKLSFYDLPPQGEITLEQFEIWAIDRLKILLEIESCLSRNKSIKEIETIIKPQFQKLLPF 116
Query: 78 HPEASEDVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKRALMEEFD 137
+ E+ ED KD SHF+LRL + R+++LR+ F+ ET L++ RF + +S + ++ D
Sbjct: 117 NTESLEDRKKDYYSHFILRLCFXRSKELREKFVRAETFLFKIRFNMLTSTDQTKFVQSLD 176
Query: 138 LPC-KAISRTEFENAKEKLEQ-VARSFDQPLPTADA----------IFYKVPFEEVPELV 185
LP + IS E +L Q V+ S L + F K+PFE V ELV
Sbjct: 177 LPLLQFISNEEKAELSHQLYQTVSASLQFQLNLNEEHQRKQYFQQEKFIKLPFENVIELV 236
Query: 186 AGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEA 245
R V++ G+AY+ Q ++L+ +F S L++ LI T + R E DRL PI+
Sbjct: 237 GNRLVFLKDGYAYLPQFQQLNLLSNEFASKLNQELIKT---YQYLPRLNEDDRLLPILNH 293
Query: 246 LSMSYLGPDYSQTK--EFGEISIKDLDQLA------RSSFPLCMRHLFDKLREDHHLKHG 297
LS Y D++Q K +F E +++ + S++PLC+++L + L+++HHL++
Sbjct: 294 LSSGYTIADFNQQKANQFSENVDDEINAQSVWSEEISSNYPLCIKNLMEGLKKNHHLRYY 353
Query: 298 GRMQLGLFLKGVGLRMEDALAFWKAEFSQ--KVGAERFDKEYAYSIRHNYGKEGKRTDYT 355
GR QL LFLKG+GL ++AL FW F++ + E+F+KEY YS RHNYG EG R +Y
Sbjct: 354 GRQQLSLFLKGIGLSADEALKFWSEAFTRNGNMTMEKFNKEYRYSFRHNYGLEGNRINYK 413
Query: 356 PYSCQKIISST-PGVGDHHGCPYRHFSEENLRAALGRMGVGSRAMEDVVDKVRNRHYQLA 414
P+ C I+S PG GD+HGCP+R +S E L A L M + + V+D + Y +A
Sbjct: 414 PWDCHTILSKPRPGRGDYHGCPFRDWSHERLSAELRSMKLTQAQIISVLDSCQKGEYTIA 473
Query: 415 CTLTFEAVHSSSC-------DAGINHPNQYFSDS 441
CT FE H+S+ I HPN YF S
Sbjct: 474 CTKVFEMTHNSASADLEIGEQTHIAHPNLYFERS 507
>gi|366987297|ref|XP_003673415.1| hypothetical protein NCAS_0A04700 [Naumovozyma castellii CBS 4309]
gi|342299278|emb|CCC67028.1| hypothetical protein NCAS_0A04700 [Naumovozyma castellii CBS 4309]
Length = 524
Score = 281 bits (718), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 159/467 (34%), Positives = 258/467 (55%), Gaps = 45/467 (9%)
Query: 19 STLPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEEMENLVRDLWKANMR- 77
S + Y PQ E+ LE FEV+A+DRL++L I L+R K +E+E L++ ++ +
Sbjct: 57 SKISFYEARPQGEITLEQFEVWAIDRLKILLEIESCLSRNKTLKEIETLIKPQFQKLLPF 116
Query: 78 HPEASEDVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKRALMEEFD 137
+ ++ D KD SHF+LRL +CRT++LR+ F+ ET L++ RF + +S + ++ +
Sbjct: 117 NTDSFLDKKKDYYSHFILRLCFCRTKELREKFIRAETLLFKIRFNMLTSFDQIKFVKSLN 176
Query: 138 LPCKAISRTEFENAKEKLEQVARSFDQPLPT-----------------ADAIFYKVPFEE 180
L S+ +F +EK E + + P + F K+PFE
Sbjct: 177 L-----SKLQFITDEEKTELSDKLYQTITPALIYQLNLTDENQRKLFFQNEKFIKLPFEN 231
Query: 181 VPELVAGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLT 240
V ELV R+ +I KG Y+ Q ++L+ T+F + L++AL+ T + R E DRL
Sbjct: 232 VIELVGNRQAFIRKGFIYIPQFQQLNLISTEFSNKLNEALMKT---YQFLPRLNEDDRLL 288
Query: 241 PIVEALSMSYLGPDYSQTKEFGEISIKDLDQL---------ARSSFPLCMRHLFDKLRED 291
PI+ LS Y D+++ +FG + D++ +++PLC+++LF L+E
Sbjct: 289 PILNHLSSGYTIADFNENSKFGMYQNGNDDEINAQTVYSEEISANYPLCIKNLFRGLKEH 348
Query: 292 HHLKHGGRMQLGLFLKGVGLRMEDALAFWKAEFSQ--KVGAERFDKEYAYSIRHNYGKEG 349
HLK+ GR QL LFLKG+GL +++L FW F++ ++ ++F+KEY Y+ RHNYG EG
Sbjct: 349 GHLKYHGRQQLSLFLKGIGLSADESLKFWSEAFTKNGRMTVDKFNKEYRYNFRHNYGLEG 408
Query: 350 KRTDYTPYSCQKIISST-PGVGDHHGCPYRHFSEENLRAALGRMGVGSRAMEDVVDKVRN 408
R +Y P+ C+ I+S PG G++HGCPYR ++ + L A L M + + ++D
Sbjct: 409 NRINYKPWDCRTILSKPRPGRGEYHGCPYRDWNPDKLTAELRSMNLTPSQIASILDSCEK 468
Query: 409 RHYQLACTLTFEAVHSSSC-------DAGINHPNQYFSDSHKILQPK 448
Y +ACT TFE H+++ I+HPN YF S ++ + K
Sbjct: 469 TEYTIACTKTFEFTHNTTGTDLEIDDQTHISHPNLYFERSRQLQKKK 515
>gi|389623649|ref|XP_003709478.1| DNA primase large subunit [Magnaporthe oryzae 70-15]
gi|351649007|gb|EHA56866.1| DNA primase large subunit [Magnaporthe oryzae 70-15]
gi|440469473|gb|ELQ38582.1| DNA primase large subunit [Magnaporthe oryzae Y34]
gi|440489649|gb|ELQ69287.1| DNA primase large subunit [Magnaporthe oryzae P131]
Length = 506
Score = 281 bits (718), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 175/458 (38%), Positives = 254/458 (55%), Gaps = 42/458 (9%)
Query: 21 LPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEEMENLVRDLWKANM---R 77
+ Y P ++ LE FE +A+DRLR+L + R K +E ++ L +
Sbjct: 38 MNFYAIPPTADITLEQFEQWAIDRLRILAELEACSFRNKTSQETALHMKPLLDKYLPLEA 97
Query: 78 HPEASEDVN----KDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKRALM 133
+ AS ++ KD HF+LRL +C TEDLR+ F+ +ET L+R R S + A +
Sbjct: 98 NSSASTQLHAQRQKDHYGHFILRLAFCSTEDLRRRFVRVETMLFRMRLAADDSRERAAFI 157
Query: 134 EEFD-LPCKAISRTEFENAKEKLEQVARSFDQPLPTADAIFYKVPFEEVPELVAGRRVYI 192
D L + + E + +L VA + + D ++ KV +E VP+LV GRRV +
Sbjct: 158 ASLDGLEWEPVPEDERRSLSAELAAVA-GWKKESAGDDEMWCKVDWERVPDLVEGRRVLL 216
Query: 193 HKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEALSMSYLG 252
G AYV + S+VVT+F S L KAL LT R + R E DRLTPI+ LS +++
Sbjct: 217 KAGKAYVPAKEQTSMVVTEFTSRLEKALELTAR---ALPRLDEDDRLTPILNHLSKNFIT 273
Query: 253 PDYS-------QTKEFGEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLF 305
PD S Q E++ ++D+L+ FPLCM+HL LR D HLKH GR+Q LF
Sbjct: 274 PDASYGSGGDDQAAPGSELTAANVDKLSSEHFPLCMQHLHRSLRRDSHLKHFGRLQYSLF 333
Query: 306 LKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTD-----YTPYSCQ 360
LKG+GL +E+ L FW++ F+ K+ + F+KEY Y++RH YG G + Y+P+SCQ
Sbjct: 334 LKGIGLSLEECLVFWRSSFN-KITDDTFNKEYRYNVRHVYGDVGGDANRRGRGYSPFSCQ 392
Query: 361 KIISS-TPGVGDHHGCPYRHFSEENLRAALGRMGVGSRAMEDVV--DKVRNRHYQLACTL 417
KI++ PG G+ HGCPYRHF+ ENL A L ++G+ R++ + V DK + + + LAC
Sbjct: 393 KILTEHPPGPGEAHGCPYRHFNLENLTALLQQVGINDRSVLNGVREDKEKQK-FHLACNR 451
Query: 418 TFEAVHSSSC----DAGIN---------HPNQYFSDSH 442
FE VH + D GI HPN+YF S+
Sbjct: 452 VFEYVHKNEIRRAKDEGIMTVAQLETIVHPNEYFKRSY 489
>gi|355561819|gb|EHH18451.1| hypothetical protein EGK_15046 [Macaca mulatta]
Length = 460
Score = 280 bits (717), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 167/433 (38%), Positives = 236/433 (54%), Gaps = 60/433 (13%)
Query: 21 LPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISD-ALARGKRPEEMEN-LVRDLWKANMRH 78
L Y P + L +FE A+DR+++LK + + ++ K E+ ++ L +L K +
Sbjct: 26 LQFYLQPPSENISLIEFENLAIDRVKLLKSVENLGVSYVKGTEQYQSKLESELRKLKFSY 85
Query: 79 PEASEDV----NKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKRALME 134
E ED +D ISHF+LRL YC+ D K E ++ SS
Sbjct: 86 RENLEDEYEPRRRDHISHFILRLAYCQISDEEKTLREQE--------IIASS-------- 129
Query: 135 EFDLPCKAISRTEFENAKEKLEQVARSFDQPLPTADAIFYKVPFEEVPELVAGRRVYIHK 194
P + S+ E+ YK+PF + +L GR+VY+
Sbjct: 130 ----PNSSGSKVVLES----------------------IYKIPFADALDLFRGRKVYLED 163
Query: 195 GHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEALSMSYLGPD 254
G AYV + +V++++ +FR+ LSKAL LT R + Q +RL P++ LS SY G D
Sbjct: 164 GFAYVPLKDIVAIILNEFRAKLSKALALTARSLPAV---QSDERLQPLLNHLSHSYTGQD 220
Query: 255 YSQTKEFGEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRME 314
YS G+IS+ +D L+ SFP CMR L LRE+HHL+HGGRMQ GLFLKG+GL +E
Sbjct: 221 YSTQGNVGKISLDQID-LSTKSFPPCMRQLHKALRENHHLRHGGRMQYGLFLKGIGLTLE 279
Query: 315 DALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQKII-SSTPGVGDHH 373
AL FWK EF + G DK +IRH++GKEGKRTDYTP+SC KII S+ P GD+H
Sbjct: 280 QALQFWKQEFIK--GKMDPDK----NIRHSFGKEGKRTDYTPFSCLKIILSNPPSQGDYH 333
Query: 374 GCPYRHFSEENLRAALGRMGVGSRAMEDVVDKVRNRHYQLACTLTFEAVHS-SSCDAGIN 432
GCP+RH E L+ L + + ++D + HYQ+AC FE +H+ C +N
Sbjct: 334 GCPFRHSDPELLKQKLQSYKISPGGISQILDLAKGTHYQVACQKYFEMIHNVDDCGFSLN 393
Query: 433 HPNQYFSDSHKIL 445
HPNQ+F +S +IL
Sbjct: 394 HPNQFFCESQRIL 406
>gi|254582929|ref|XP_002499196.1| ZYRO0E06292p [Zygosaccharomyces rouxii]
gi|238942770|emb|CAR30941.1| ZYRO0E06292p [Zygosaccharomyces rouxii]
Length = 531
Score = 280 bits (715), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 167/463 (36%), Positives = 256/463 (55%), Gaps = 34/463 (7%)
Query: 19 STLPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEEMENLVRDLWKANMR- 77
S L Y PQ E+ L+ FE++A+DRL+VL + +AR K +E E +V+ L + +
Sbjct: 70 SKLSFYELPPQGEITLDQFEIWAIDRLKVLLELESCVARNKTAKETETIVKPLLQKLLPF 129
Query: 78 HPEASEDVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKRALMEEFD 137
+ ++ ED KD SHF+LRL +CRT+DLR FL ET L++ RF + +S+ + ++ D
Sbjct: 130 NTDSLEDKKKDYYSHFILRLCFCRTKDLRDKFLRAETLLFKLRFNMLTSQYQAKFVQSLD 189
Query: 138 LP-CKAISRTE-FENAKEKLEQVARSFDQPLPTADAI----------FYKVPFEEVPELV 185
LP + IS E E ++E + ++ L D + F K+PFE V +LV
Sbjct: 190 LPMLQFISEDEKMELSQELYQTISPQLQFQLNLTDEMQRRQYFQNERFIKLPFESVIDLV 249
Query: 186 AGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEA 245
R+V++ KG AY+ Q ++L+ +F L + L+ R + E DRL PI+
Sbjct: 250 GSRQVFLKKGFAYLPQFQQLNLLSREFAQRLEEELL---RTFQHLPHLNEDDRLIPILTH 306
Query: 246 LSMSYLGPDYSQ-TKEFG------EISIKDL-DQLARSSFPLCMRHLFDKLREDHHLKHG 297
LS Y DY Q + EFG EI+ +++ + S+FPLC ++LF L++ HHL++
Sbjct: 307 LSTGYTISDYQQYSHEFGSDAQEGEINSQNVYSKEISSNFPLCAKNLFSGLQQHHHLRYN 366
Query: 298 GRMQLGLFLKGVGLRMEDALAFWKAEFSQKVG---AERFDKEYAYSIRHNYGKEGKRTDY 354
GR QL FLKG+GL +DAL FW F+ + G ++F+KEY Y+ RHNYG EG R Y
Sbjct: 367 GRQQLSFFLKGIGLNADDALKFWSEAFTARGGNMTQDKFNKEYRYNFRHNYGLEGSRISY 426
Query: 355 TPYSCQKIISST-PGVGDHHGCPYRHFSEENLRAALGRMGVGSRAMEDVVDKVRNRHYQL 413
+ C+ I+S P G+ HGCPYR ++ + L + L M + S + V++ + + +
Sbjct: 427 RVWDCRTILSKPRPARGEFHGCPYRDWNVDKLTSELSSMKLTSTQVSSVLESCQKNEFTI 486
Query: 414 ACTLTFEAVHSSSC-----DAGINHPNQYFSDSHKILQPKNNN 451
ACT FE+ H + I HPN YF S + Q K++N
Sbjct: 487 ACTKVFESTHGQTGMEVDDQTHIAHPNLYFERSRQ-WQKKHSN 528
>gi|307192241|gb|EFN75543.1| DNA primase large subunit [Harpegnathos saltator]
Length = 565
Score = 280 bits (715), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 165/446 (36%), Positives = 241/446 (54%), Gaps = 32/446 (7%)
Query: 21 LPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARG--KRPEEMENLVRDLWKA---- 74
+ +Y P E+ LEDF+ DRL+VL+ I RG K E+ + + D K+
Sbjct: 26 IQMYDVPPMGEMSLEDFQELGFDRLKVLRLIETTNCRGDLKTLEDRKKALYDSLKSDGLK 85
Query: 75 -----------NMRHPEASEDVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLL 123
N + E S KD ISHF+LRLVYC + KWF++ E ++ RF
Sbjct: 86 YYANLLFADGSNSQSEEHSLSRMKDHISHFILRLVYCHDPEQSKWFMNQEVEFFKLRFSS 145
Query: 124 GSSEAKRALMEEFDLPCKAISRTEFENAKEKLEQVARSFDQPLPTADAI-FYKVPFEEVP 182
+ L+ +L C IS E + E+L S + D I YKV FE+V
Sbjct: 146 LDKKGVEHLLSINNLDCIPISLDEKLDLVEELT----SSSGKVTNIDIIDIYKVNFEKVI 201
Query: 183 ELVAGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPI 242
+LV GR++Y+ G AY+ ++S+ V+ FR L L + + + +RLT
Sbjct: 202 DLVRGRKIYLKAGMAYITHMDIISVFVSYFREILVAGLESAKSMYYNI---SDDERLTRY 258
Query: 243 VEALSMSYLGPD---YSQTKEFGEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGR 299
+ L ++ G +S T I L+ L++SS+PLCMR L + L + HLK+ GR
Sbjct: 259 LTGLPSAFSGMARVVWSTTA----TPIDKLNDLSKSSYPLCMRTLHEALCNNSHLKNSGR 314
Query: 300 MQLGLFLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSC 359
MQ GLFLKG+G+ +EDAL FW F++K+ F+K+YAYSIRH +GKEG++T+YTPY C
Sbjct: 315 MQYGLFLKGIGVTLEDALRFWSHAFAKKIDGVAFEKKYAYSIRHYFGKEGRQTNYTPYGC 374
Query: 360 QKIISSTPGVGDHHGCPYRHFSEENLRAALGRMGVGSRAMEDVVDKVRNRHYQLACTLTF 419
QKIISS G G++HGCP+RH ++L L G+ + +++D ++ Y LAC F
Sbjct: 375 QKIISSAVGPGEYHGCPFRHMDRDSLCQKLTSYGIFATNTTEILDLAKDGQYHLACAKYF 434
Query: 420 EAVHSSSCDAGINHPNQYFSDSHKIL 445
E VH+ + HPN YF++S IL
Sbjct: 435 EVVHNKPASKPLLHPNAYFAESRVIL 460
>gi|50292827|ref|XP_448846.1| hypothetical protein [Candida glabrata CBS 138]
gi|49528159|emb|CAG61816.1| unnamed protein product [Candida glabrata]
Length = 502
Score = 280 bits (715), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 164/452 (36%), Positives = 258/452 (57%), Gaps = 29/452 (6%)
Query: 19 STLPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEEMENLVRDLWKAN--M 76
+ L Y PQ E+ LE+FE++A+DRL++L I LAR K +E+E +++ L+K
Sbjct: 45 NKLSFYDIPPQGEITLEEFEIWAIDRLKLLLEIESCLARNKTLKEIEGIIKPLFKKYNIF 104
Query: 77 RHPEASEDVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKRALMEEF 136
+ + ED K+ SHF+LRL +C++++LR F+ +ET L R RF + SS + ++
Sbjct: 105 NNMDTFEDRKKEYYSHFILRLCFCKSKELRDKFVRIETMLLRLRFNMLSSTDQAKFVKSL 164
Query: 137 DLPC-KAISRTEFENAKEKLEQ-VARSFDQPLPTADA----------IFYKVPFEEVPEL 184
+LP + I E +L Q ++R L AD F K+PFE V EL
Sbjct: 165 NLPSLQFIDEEEKAELSTQLYQTISRDLQFTLNLADEQQRQLYFKNEKFIKLPFESVIEL 224
Query: 185 VAGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVE 244
V R+V++ G+AY+ Q ++L+ +F + L + LI T + R E DRL PI+
Sbjct: 225 VGNRQVFLKNGYAYLPQFQQLNLIANEFSTKLQEELIKT---YQYLPRLNEDDRLIPILN 281
Query: 245 ALSMSYLGPDY-SQTKEFG-----EISIKDL-DQLARSSFPLCMRHLFDKLREDHHLKHG 297
LS Y D S +FG EI+ K + + +PL +++LF L+E++HL++
Sbjct: 282 HLSSGYTIADSGSFDSQFGNNEDNEINAKSVWSEEISKHYPLSVKNLFYGLKENNHLRYH 341
Query: 298 GRMQLGLFLKGVGLRMEDALAFWKAEFSQ--KVGAERFDKEYAYSIRHNYGKEGKRTDYT 355
GR QL LFLKG+GL +++AL FW F++ K+ E+F+KEY Y+IRH+YG EG R +Y
Sbjct: 342 GRQQLTLFLKGIGLSVDEALKFWHDAFTKNNKMTTEKFNKEYRYNIRHSYGLEGNRINYK 401
Query: 356 PYSCQKIISST-PGVGDHHGCPYRHFSEENLRAALGRMGVGSRAMEDVVDKVRNRHYQLA 414
P+ C+ I+S P G++HGCP+R ++ + L + L +MG+ ++ + DV+D Y +A
Sbjct: 402 PWDCRTILSKPRPNRGEYHGCPFRDWNHDRLTSELSKMGLTTQQITDVLDSCDKHEYTIA 461
Query: 415 CTLTFEAVHS--SSCDAGINHPNQYFSDSHKI 444
CT FE H+ I+HPN YF S ++
Sbjct: 462 CTKVFEMTHNVPEGESMHISHPNLYFERSRQL 493
>gi|358055196|dbj|GAA98965.1| hypothetical protein E5Q_05653 [Mixia osmundae IAM 14324]
Length = 564
Score = 280 bits (715), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 167/463 (36%), Positives = 251/463 (54%), Gaps = 43/463 (9%)
Query: 21 LPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEEMENLV------------ 68
L YR P EV +E+FE +A+DRL+VL I +R + +++ ++
Sbjct: 53 LSFYRKPPTQEVTIEEFECWAIDRLKVLAEIEAQSSRNRSYDDLNKIILARAKQYLPLSS 112
Query: 69 -------RDLWKANMRHPEASEDV-----NKDIISHFVLRLVYCRTEDLRKWFLSMETAL 116
R +K + P E KD SHFVLRL +CR+++LR F+ E +L
Sbjct: 113 SYVPTTSRSAFKNGLPLPGTPEHAIESERRKDHYSHFVLRLAFCRSDELRTRFVRAEASL 172
Query: 117 YRYRFLLGSSEAKRALMEEFDLPCKAISRTEFENAKEKLEQVARSFDQPLPTADAIFYKV 176
+R RF ++ ++ + ++ + +S E + E L V F+KV
Sbjct: 173 FRARFDSDDAQERQQFINSLNMEWQTVSMEEKLDIAEHLIAVHSHLRTHEDVRAEQFFKV 232
Query: 177 PFEEVPELVAGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQER 236
P+ +V LV RR+YI +G AYV SLV+ +F+ L+ L +T R + R E
Sbjct: 233 PWTKVASLVGMRRIYIKRGEAYVPARDQASLVLEEFQRELAHNLEMTAR---AVPRLDED 289
Query: 237 DRLTPIVEALSMSYLG---PDYSQTK---EFGEISIKDLDQLARSSFPLCMRHLFDKLRE 290
DRL P++E LSMS+L +Y+ + + I+ +D LA+ FPLCMR+L LRE
Sbjct: 290 DRLLPVLEHLSMSFLAGMTSEYTSMRKDEDGNAITADMIDDLAKRHFPLCMRNLHSVLRE 349
Query: 291 DHHLKHGGRMQLGLFLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGK 350
HL+H R Q LFLKGVGL +++A+ FW+ F+ + A++FDKE+ Y+IRHNYG EGK
Sbjct: 350 KKHLRHHARQQYNLFLKGVGLSVDEAIVFWRRSFTS-MSADKFDKEHKYNIRHNYGLEGK 408
Query: 351 RTDYTPYSCQKIISS-TPGVGDHHGCPYRHFSEENLRAALGRMGVGSRAME--DVVDKVR 407
R +Y P CQ+IISS PG D HGCP+RHF+E +L +ALG + A++ ++++ +
Sbjct: 409 RMNYPPKDCQRIISSDQPGPQDSHGCPFRHFAEPSLSSALGSTYRITNAVDLREILELAK 468
Query: 408 NRHYQLACTLTFEAVHSSSCDAGI------NHPNQYFSDSHKI 444
H +ACT FE H GI +HPN+YF S ++
Sbjct: 469 TGHPHVACTRVFEITHGIKKGEGIGQSASVSHPNKYFDRSMEL 511
>gi|403415655|emb|CCM02355.1| predicted protein [Fibroporia radiculosa]
Length = 490
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 161/448 (35%), Positives = 252/448 (56%), Gaps = 41/448 (9%)
Query: 28 PQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEEMENLVRD-------LWKANMRHPE 80
P ++ +E+FE A+DRLR+L I + AR + +E+++ + L +H +
Sbjct: 35 PLGDITIEEFETCALDRLRLLAEIESSFARNRTYDELKDHILPQCEKYIPLNSTAAKHVD 94
Query: 81 ASEDVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKRALMEEFDLPC 140
KD I HF+LRL +CR+E+LR+ F+ E AL+R RF S+ + +
Sbjct: 95 TDAQRRKDHIGHFILRLAFCRSEELRQRFVKAEAALFRVRFDTDISDERERFLNSKKFAW 154
Query: 141 KAISRTEFENAKEKLEQVARSFDQPLPTADAI-----FYKVPFEEVPELVAGRRVYIHKG 195
+S+ E +L ++ +P+ ++ +YKV + VP+LV RRV + +G
Sbjct: 155 IPVSQEEERQYAAELAVLS------IPSKESAVREEKYYKVKWTRVPDLVEKRRVILKRG 208
Query: 196 HAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEALSMSYLGPDY 255
AYV + S+V +F+S+L++AL +T + E R+ PI+ LS +L
Sbjct: 209 FAYVPSRETSSIVFQEFQSSLTQALEMTAKALPQL---DEDTRIVPILNHLSQGFLAGVS 265
Query: 256 SQ-----TKEFGEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVG 310
S+ + EI+ + +D+LA FP+CMR+L D LR D HLKH GR+Q GLFLK +G
Sbjct: 266 SEWSTATSGNGNEITAEMVDELAHKHFPMCMRNLHDNLRRDRHLKHFGRLQYGLFLKVLG 325
Query: 311 LRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQKIISS-TPGV 369
L +++A+AFW+ FS + ++F+KEY Y+IRH+YG EGKR +Y SCQ+I+++ P
Sbjct: 326 LSIDEAIAFWRRSFSN-IQDDKFNKEYRYNIRHSYGLEGKRANYAAKSCQQILTADQPST 384
Query: 370 GDHHGCPYRHFSEENLRAALGRM----GVGSRAMEDVVDKVRNRHYQLACTLTFEAVHSS 425
GD HGCPYRHFS +NL+ AL M G+ + + ++ V++ HY +ACT FE H S
Sbjct: 385 GDSHGCPYRHFSSDNLQTALLSMYSSQGLSAADLPGILQNVKSGHYHVACTRVFEITHGS 444
Query: 426 -------SCDAG--INHPNQYFSDSHKI 444
AG + HPNQY + S ++
Sbjct: 445 KGVKKGEGVGAGESVTHPNQYAARSREL 472
>gi|290983243|ref|XP_002674338.1| predicted protein [Naegleria gruberi]
gi|284087928|gb|EFC41594.1| predicted protein [Naegleria gruberi]
Length = 552
Score = 279 bits (714), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 172/485 (35%), Positives = 258/485 (53%), Gaps = 63/485 (12%)
Query: 23 LYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEEME-NLVRDLWKA-NMRHPE 80
+Y P E+ LE FE ++ RL++L+ I AR + ++ N++ + K ++R P
Sbjct: 41 MYHLPPMGEITLEQFEEYSFQRLKLLRMIDTWKARNISGKALQDNIIEESNKVFDLRMPH 100
Query: 81 ASEDVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKRALMEEFDLPC 140
++ D ISH VLRL + R+E+LR+WFL+ E AL+ R + + +A +++ +
Sbjct: 101 DLDNCEPDWISHHVLRLAFARSENLRQWFLTNECALFESRLMSDTQDAHIEILQRNGINA 160
Query: 141 KAISRTE---FENAKEK--------LEQVARSFDQPLPT--------------------- 168
+ +S E +E A +K L+ + ++P T
Sbjct: 161 ERVSVEEKRKYEGALQKMFTKLYFHLQYQQQKNEKPQQTDSDAPVLISHNKSNFSDMRFN 220
Query: 169 -ADAIFYKVPFEEVPELVAGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKW 227
D + +KV F V +LV+ R V+I G AY+ H + SL+ FR++L L +
Sbjct: 221 VEDTLVFKVDFVSVLQLVSSRSVFIQNGKAYLFAHDLTSLIKQHFRASLVLGLSKIQAVY 280
Query: 228 TSTIREQERDRLTPIVEAL--SMSYLGPDYSQTKEF---GEISIKDLDQLARSSFPLCMR 282
+ E+E+DRL P ++ + + S YS T+ F GE+ + ++ L++ SFPLCMR
Sbjct: 281 PEYLNEEEKDRLLPFLKDVIPAASEGKSLYSNTQSFMNTGEVKAEQIESLSKQSFPLCMR 340
Query: 283 HLFDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWKAEFSQK-VGAERFDKEYAYSI 341
L +L+E HHLKH GRMQ GLFLKG+GL++EDAL FW+ F+ + E FDK+YAY+I
Sbjct: 341 VLHKELKEKHHLKHYGRMQYGLFLKGIGLKLEDALQFWRENFTASGMTTESFDKQYAYNI 400
Query: 342 RHNYGKEGKRTDYTPYSCQKIISSTPGVGDHHGCPYRHFSEENLRAALGRMGVGSRAMED 401
RHNYGKEGK+T+YTPY C KII++ V CP++ F E LR + G G+ ED
Sbjct: 401 RHNYGKEGKKTNYTPYGCSKIINNPEYV-----CPFKVFKPEELRHEMRSYGGGATFNED 455
Query: 402 ----VVDKVRNRHYQLACTLTFEAVHSSSCDAG-------------INHPNQYFSDSHKI 444
V++ +N YQ+AC FE H S A HPN YFS S K
Sbjct: 456 ELQEVIEYAQNHQYQIACRRFFEVSHGISKKANNIQLIDKEDDGSSFPHPNTYFSRSIKY 515
Query: 445 LQPKN 449
L+ KN
Sbjct: 516 LKSKN 520
>gi|425766618|gb|EKV05221.1| hypothetical protein PDIP_83950 [Penicillium digitatum Pd1]
gi|425775269|gb|EKV13547.1| hypothetical protein PDIG_37360 [Penicillium digitatum PHI26]
Length = 501
Score = 279 bits (714), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 179/492 (36%), Positives = 256/492 (52%), Gaps = 52/492 (10%)
Query: 3 IVRSQRSRTNTPN----DSVSTLPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARG 58
I+ ++ + TP D L +Y P E+ LE FE +A+DRL++L I R
Sbjct: 16 IIDPKKRQFATPTYKQQDYAHRLNIYEIPPTAEITLEQFEQWAIDRLKILAEIEACSYRN 75
Query: 59 KRPEEMENLVRDLWK------ANMRHPEASEDV------NKDIISHFVLRLVYCRTEDLR 106
K P E + L + +N P + D KD SHF+LRL + TEDLR
Sbjct: 76 KSPAETATYITPLLQKFLPLSSNTSSPSGAADPRLKNERQKDHYSHFILRLAFSATEDLR 135
Query: 107 KWFLSMETALYRYRFLLGSSEAKRALMEEFDLPCKAISRTEFENAKEKLEQVARSFDQPL 166
+ F ET L+R+RF S KRA ++ +L + + +FE E E + S
Sbjct: 136 RRFARAETMLFRFRFQQDDSREKRAFIDSLNLDWEPVG--DFEKT-EIAENLLSSTPGLR 192
Query: 167 PTADAIFYKVPFEEVPELVAGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRK 226
D +YKV +E+VPEL+ R V++ +G AYV + +S+++ +F + L +AL LT+R
Sbjct: 193 RLDDETWYKVDWEKVPELIERRSVFLKRGKAYVPGREQLSMIMAEFTARLERALELTSR- 251
Query: 227 WTSTIREQERDRLTPIVEALSMSYLGPD--YSQTKEF---GEISIKDLDQLARSSFPLCM 281
+ R E DRLTPI+ LS ++ + YS+ + + I+ +DQLA+ FPLCM
Sbjct: 252 --ALPRLDEDDRLTPILNHLSKNFGSAESVYSEGEGYVDGSPITASSIDQLAQQHFPLCM 309
Query: 282 RHLFDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSI 341
+ L LR+++HLKH GR+Q LFLKG+GL +E+ + FW+ F K E F+ +Y Y+I
Sbjct: 310 KSLHVNLRKNNHLKHFGRLQYTLFLKGIGLSLEECILFWRQGFKGKTDDE-FNSQYKYNI 368
Query: 342 RHNYGKEGKRTD-----YTPYSCQKIIS-STPGVGDHHGCPYRHFSEENLRAALGRMGVG 395
RH YG+ G + YTPYSCQKI+ S PG+G HGCPYRH+S +NL L GV
Sbjct: 369 RHAYGEVGGDVNRRGKGYTPYSCQKILGDSNPGIGQTHGCPYRHYSVDNLVGFLQATGVN 428
Query: 396 SR-AMEDVVDKVRNRHYQLACTLTFEAVHSSSCDA-------------GINHPNQYFSDS 441
+ + V + V Y +AC FEA H + I HPN YF S
Sbjct: 429 DKEVLRGVREDVGKMRYHIACNRVFEATHKNEIKKVKEDGSWSQTDLDTIVHPNTYFKRS 488
Query: 442 ----HKILQPKN 449
H PKN
Sbjct: 489 FLLKHMAKAPKN 500
>gi|395333588|gb|EJF65965.1| DNA primase, large subunit [Dichomitus squalens LYAD-421 SS1]
Length = 480
Score = 279 bits (713), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 168/457 (36%), Positives = 251/457 (54%), Gaps = 36/457 (7%)
Query: 21 LPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEEMENLVRDLWK------A 74
L Y P E+ +E FE A+DRLRVL I AR + EEM ++ +W +
Sbjct: 29 LNFYDRPPVEEITIEQFETAALDRLRVLAEIESCFARNRTFEEMGKVIVGIWDKYLPLHS 88
Query: 75 NMRHPE-ASEDVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKRALM 133
+ H E E+ KD I HFVLRL +CR+EDLR+ F+ ET L++ R+ + +
Sbjct: 89 STAHLERLEEERRKDHIGHFVLRLAFCRSEDLRRRFVKAETTLFKLRYQSDDHNEREKFL 148
Query: 134 EEFDLPCKAISRTEFENAKEKLEQVARSFDQPLPTADAIFYKVPFEEVPELVAGRRVYIH 193
+ D S E ++ S+D + + +YKV + VP+LV R+V +
Sbjct: 149 KSRDFDWVVASPEEIQDLI-----TPTSYDPA--SKSSTYYKVKWTRVPDLVEKRKVVLK 201
Query: 194 KGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEALSMSY--- 250
G AYV + S+V +F+ +L K L T + + R E RL PI++ LS +
Sbjct: 202 GGMAYVPAAEQASIVYQEFQRHLEKDLEATAK---ALPRLDEDTRLIPILDNLSKGFQAG 258
Query: 251 LGPDYSQTKEFGEISIKDL-DQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGV 309
+ +++ E E D+ D++A +P CMR+L LR D HLKH GR+Q GLFLK +
Sbjct: 259 ISSEWAGKTEGQEGLTADMIDEMAYKHYPACMRNLHMALRRDKHLKHFGRLQYGLFLKVL 318
Query: 310 GLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQKII-SSTPG 368
GL +++ALAFW+ FS + ++F+KEY Y+IRH+YG EGKR +Y SCQ+I+ S PG
Sbjct: 319 GLSIDEALAFWRKAFS-TMQDDKFNKEYRYNIRHSYGLEGKRANYAAMSCQQILMSHEPG 377
Query: 369 VGDHHGCPYRHFSEENLRAALGRM----GVGSRAMEDVVDKVRNRHYQLACTLTFEAVHS 424
GD HGCPYRHFS +NL++AL M G+ S+ M +++ V+ +HY +ACT FE H+
Sbjct: 378 SGDSHGCPYRHFSADNLQSALLTMYSDHGLTSQDMPEIMHMVKQKHYHVACTRVFEITHA 437
Query: 425 ---------SSCDAGINHPNQYFSDSHKILQPKNNNA 452
+ HPNQY + S ++ + +N +
Sbjct: 438 HQGVKKGEGVGGGESVTHPNQYAARSRELEKKENGDG 474
>gi|254568628|ref|XP_002491424.1| Subunit of DNA primase, which is required for DNA synthesis and
double-strand break repair [Komagataella pastoris GS115]
gi|238031221|emb|CAY69144.1| Subunit of DNA primase, which is required for DNA synthesis and
double-strand break repair [Komagataella pastoris GS115]
gi|328352067|emb|CCA38466.1| DNA primase large subunit [Komagataella pastoris CBS 7435]
Length = 514
Score = 278 bits (712), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 159/469 (33%), Positives = 253/469 (53%), Gaps = 51/469 (10%)
Query: 21 LPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEEMENLVRDLWKANMRHPE 80
L Y P E+ L++FE +A+DRL+VL I + R K +E+E+ ++ + + ++
Sbjct: 44 LSFYSVPPFEEITLDEFEKWALDRLKVLIEIESSHLRNKTMKELESSIKPILEKHLPLST 103
Query: 81 ASEDVN-------KDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKRALM 133
++DVN KD SH++LRL +CR+EDLR F+ E+ L++ R+ + SS+ ++ +
Sbjct: 104 NTKDVNQLVAERRKDHYSHYILRLAFCRSEDLRNRFVRAESTLFKLRYKMLSSQEQKQFI 163
Query: 134 EEFDLPCKAISRTEFENAKEKLEQVARSFDQP-----------LPTADAI--------FY 174
LP +A++ E + EQ+ + P + T D++ F
Sbjct: 164 NGLHLPWEAVNE---EEKQTHFEQLLAACTVPIRGILSQETNVMVTNDSVRAFCAKEQFL 220
Query: 175 KVPFEEVPELVAGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQ 234
KVPFE +P+LV+ +++HKG YV Q +SL+ QF S L+++L +T R S +
Sbjct: 221 KVPFEFIPDLVSSHSIFMHKGFGYVPQFQQLSLIANQFVSQLAESLQITVR---SIPKLD 277
Query: 235 ERDRLTPIVEALSMSYLGPDYSQTKEFGEISIKDLDQLARSS------FPLCMRHLFDKL 288
E DRL P++ +S Y+ +Y + G+ + D++ S +PLCM L L
Sbjct: 278 EDDRLLPVLNHISKGYIANEYQSDFKDGDADVGDINAETVQSKSVSQHYPLCMSQLMKGL 337
Query: 289 REDHHLKHGGRMQLGLFLKGVGLRMEDALAFWKAEFSQ-KVGAERFDKEYAYSIRHNYGK 347
++HHLK+ GR QL LFLKG+GL +++AL FW F++ + E+F+KEY Y+ RHNYG
Sbjct: 338 SQEHHLKYLGRQQLSLFLKGIGLSVDEALKFWSFNFTKGPMNLEQFNKEYRYNFRHNYGL 397
Query: 348 EGKRTDYTPYSCQKIIS-STPGVGDHHGCPYRHFSEENLRAALGRMGVGSR-AMEDVVDK 405
EG R +Y P+ C +I+S ++P ++HGCPYR + E L L +MG+ + + +VD
Sbjct: 398 EGGRINYKPWDCHQILSKASPSRDEYHGCPYRDLTSEKLTMELNKMGITDQFDVNTIVDN 457
Query: 406 VRNRHYQLACTLTFEAVHSSSCDAG----------INHPNQYFSDSHKI 444
Y ACT FE H + I HPN YF S K+
Sbjct: 458 SSRGDYTNACTKVFELTHKKEIEIATQKTKFDLSLITHPNLYFDRSRKL 506
>gi|380013643|ref|XP_003690860.1| PREDICTED: DNA primase large subunit-like [Apis florea]
Length = 555
Score = 278 bits (712), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 154/446 (34%), Positives = 251/446 (56%), Gaps = 31/446 (6%)
Query: 21 LPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARG---KRPEEMENLVRDLWKANMR 77
L +Y + P E+ L +FE +RL++L+ + + R + + +NL L K ++
Sbjct: 30 LHMYDFPPTGEISLTEFEELGRERLKLLQHVENNAIRTDFKTQEDRKQNLHTALMKDGLK 89
Query: 78 H-----------PEASEDVN---KDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLL 123
+ D+ KD ISHF+ RL +C+ D + WF++ E L++ RF
Sbjct: 90 YFAHLLYAKGCKSPTETDLQCRRKDHISHFISRLSHCQESDRQMWFINQEIELFKLRFSS 149
Query: 124 GSSEAKRALMEEFDLPCKAISRTEFENAKEKLEQVARSFDQPLPTADAIFYKVPFEEVPE 183
E L+ ++ C+ I++ E + +E+L +++ S + L FYKV F V +
Sbjct: 150 LDKEGIEKLLSMHNIDCQQITQEEKDEIREEL-RLSTSSIKVLNIDMTEFYKVSFYRVTD 208
Query: 184 LVAGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIV 243
L+ RRVYI++G AY+ +VSL ++ FR NL + S IR DR+ +
Sbjct: 209 LIRSRRVYINQGIAYIPQIDLVSLFLSYFRKNLLDGMPAAK---MSIIRMHGDDRIQSYL 265
Query: 244 EALSMSYLGPDYSQTK----EFGEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGR 299
+++ P+ S LD+L+R+S+P+CMR L + L+ +HHLK+ GR
Sbjct: 266 KSI------PNISDKTCVVWTSSATPTDKLDELSRTSYPMCMRILHEALKSNHHLKNSGR 319
Query: 300 MQLGLFLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSC 359
+Q GLF+KG+G+ MED+L+FWK EF++K+ + +FDKEYAY+IRH YGKEG++T+YTP C
Sbjct: 320 IQYGLFIKGIGVTMEDSLSFWKTEFTKKIDSVKFDKEYAYTIRHTYGKEGRQTNYTPLGC 379
Query: 360 QKIISSTPGVGDHHGCPYRHFSEENLRAALGRMGVGSRAMEDVVDKVRNRHYQLACTLTF 419
QKI+SS G+ +GCPY+H +L+ L G+ + ++ ++ + ++ +Y ACT F
Sbjct: 380 QKIMSSVQSPGEFNGCPYKHMDNASLKQKLFSYGIPAASINEITELAKSDNYFGACTAYF 439
Query: 420 EAVHSSSCDAGINHPNQYFSDSHKIL 445
+ +H+ D I HPN YF +S IL
Sbjct: 440 KILHNRLPDKPIIHPNGYFLESRAIL 465
>gi|392566823|gb|EIW59998.1| DNA primase large subunit [Trametes versicolor FP-101664 SS1]
Length = 477
Score = 278 bits (711), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 173/450 (38%), Positives = 254/450 (56%), Gaps = 46/450 (10%)
Query: 21 LPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEEMENLVRDL------WKA 74
L Y P ++ +E+FE FA+DRLRVL I + AR + EE+ ++++ + A
Sbjct: 32 LNFYDRPPTDDITIEEFETFALDRLRVLAEIESSYARNRTFEELLSVIQAICLKYLPLNA 91
Query: 75 N-MRHPEASEDVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKRALM 133
N + E+ KD I HFVLRL +CR+E+LR+ F+ ET L++ RF + A
Sbjct: 92 NSAKEKPRDEERRKDHIGHFVLRLAFCRSEELRRRFVKAETTLFKIRF----EKDDHAEK 147
Query: 134 EEFDLPCKAISRTEFENAKEKLEQVARSFDQPLPTADAIFYKVPFEEVPELVAGRRVYIH 193
E+F + +F+ E+V + FD P +YKV + VP+LV RRV +
Sbjct: 148 EQF------LGSRDFDWVLATSEEV-QGFDAP-----GKYYKVKWTRVPDLVEKRRVVLK 195
Query: 194 KGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEALSMSYLGP 253
G AYV + S+VV +F+++L K L +T + + R E RL PI++ LS +L
Sbjct: 196 GGMAYVPATEQSSIVVQEFQTHLEKDLEMTAK---ALPRLDEDTRLVPILDNLSKGFLAG 252
Query: 254 DYSQ----TKEFGEISIKDL-DQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKG 308
S+ + G+ D+ D++A FP CMR+L LR D HLKH GR+Q GLFLK
Sbjct: 253 VSSEWSNASAGAGDGLTADMVDEMAFKHFPACMRNLHMCLRRDKHLKHFGRLQYGLFLKI 312
Query: 309 VGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQKII-SSTP 367
+GL +E+AL FW+ FS K+ ++F+KEY Y+IRH+YG EGKR +Y SCQ+I+ S P
Sbjct: 313 LGLSIEEALVFWRKSFS-KIQDDKFNKEYRYNIRHSYGLEGKRANYAAKSCQQILMSDQP 371
Query: 368 GVGDHHGCPYRHFSEENLRAAL----GRMGVGSRAMEDVVDKVRNRHYQLACTLTFEAVH 423
G GD HGCPYRHFS +NL++AL G G+ S M +++ V+ H+ +ACT FE H
Sbjct: 372 GPGDSHGCPYRHFSADNLQSALLTMYGEQGLTSADMPEIMQTVKAGHFHVACTRVFEITH 431
Query: 424 SSSC---------DAGINHPNQYFSDSHKI 444
+ + HPNQY + S ++
Sbjct: 432 ARQGVKKGDGVGEGESVTHPNQYAARSREL 461
>gi|58259871|ref|XP_567348.1| hypothetical protein CNJ01730 [Cryptococcus neoformans var.
neoformans JEC21]
gi|134116450|ref|XP_773179.1| hypothetical protein CNBJ1740 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50255800|gb|EAL18532.1| hypothetical protein CNBJ1740 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57229398|gb|AAW45831.1| hypothetical protein CNJ01730 [Cryptococcus neoformans var.
neoformans JEC21]
Length = 502
Score = 278 bits (710), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 162/456 (35%), Positives = 246/456 (53%), Gaps = 42/456 (9%)
Query: 21 LPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEEMENLVRDLWKANM---- 76
L Y P L++ LE+FE A+ RLRVL I R ++ + + K ++
Sbjct: 39 LNFYERPPALDITLEEFETCAISRLRVLSHIESLSHRSLPYAQVASGIATYAKTHLPLSS 98
Query: 77 ---RHPEASEDVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKRALM 133
R+ ++ +D I H+VLRL +CR+ DLR+ F+ E AL++ RF + A +
Sbjct: 99 NTARNVNLDDERRRDEIGHWVLRLAFCRSPDLRQRFVRSELALFKSRFETDDKNERAAFL 158
Query: 134 EEFDLPCKAISRTEFENAKEKLEQVARSFDQPLPTA---DAI---FYKVPFEEVPELVAG 187
+ E + K +L+Q+ LP DAI ++KVP+ VP+LV
Sbjct: 159 RSLSFNYDTVGEDEKKFLKAELQQM-------LPKGSKEDAISETWFKVPWYTVPDLVGA 211
Query: 188 RRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEALS 247
RRV + G A+V +SLV+ F L KAL T + R E +RL P+++ L+
Sbjct: 212 RRVLVKGGLAFVPQSLQLSLVLQVFADRLEKALEFTAKNLP---RLDEDERLGPVIDHLA 268
Query: 248 MSYL----GPDYSQTKEFGE---ISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRM 300
S+L DY + E G+ ++ +D +AR FP CMRHL++KL++DHHLKH GR+
Sbjct: 269 SSFLSGIGASDYQPSDELGDGMTVTADTIDDVARKHFPPCMRHLYEKLKKDHHLKHWGRL 328
Query: 301 QLGLFLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQ 360
QL LFLKG+GL ++ A+ FW+ + + ++F+KEY Y+IRH+YG+EG+R +Y P +CQ
Sbjct: 329 QLTLFLKGLGLPLDQAILFWRRSYGTSMTDDKFNKEYRYNIRHSYGQEGRRANYPPKNCQ 388
Query: 361 KIIS-STPGVGDHHGCPYRHFSEENLRAALGR-----MGVGSRAMEDVVDKVRNRHYQLA 414
+I++ PG D HGCP+RHFS ENL L S M D++D V+ HY +A
Sbjct: 389 QILTQDQPGTQDAHGCPFRHFSPENLTTFLTNTYPDHFSRTSPEMRDILDSVKASHYHVA 448
Query: 415 CTLTFEAVHSSSCDAG------INHPNQYFSDSHKI 444
CT FE G ++HPN++ S ++
Sbjct: 449 CTRVFEVTRGVKKGEGLGNGESVSHPNKWADRSREL 484
>gi|401840233|gb|EJT43135.1| PRI2-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 528
Score = 278 bits (710), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 166/454 (36%), Positives = 253/454 (55%), Gaps = 34/454 (7%)
Query: 19 STLPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEEMENLVR-DLWKANMR 77
S L Y PQ E+ LE FE++A+DRL++L I L+R K +E+E +++ L K
Sbjct: 57 SKLSFYDLPPQGEITLEQFEMWAIDRLKILLEIESCLSRNKSIKEIETIIKPQLQKTLPF 116
Query: 78 HPEASEDVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKRALMEEFD 137
+ E+ ED KD SHF+LRL +CR+++LR+ F+ ET L++ RF + +S + ++
Sbjct: 117 NTESLEDKKKDFYSHFILRLCFCRSKELREKFIRAETFLFKIRFNMLTSSDQTKFVQSLA 176
Query: 138 LPC-KAISRTEFENAKEKLEQ-VARSFDQPLPTADA----------IFYKVPFEEVPELV 185
LP + IS E +L Q ++ S L + F K+PFE V ELV
Sbjct: 177 LPLLQFISSEEKAELSHQLYQTISASLQFQLNLNEEHQRKQYFQQEKFIKLPFENVIELV 236
Query: 186 AGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEA 245
R+V++ G+AY+ Q ++L+ +F S L++ L+ R + R E DRL PI+
Sbjct: 237 GNRQVFLKSGYAYLPQFQQLNLLSNEFASKLNEELL---RTYLYLPRLNEDDRLLPILNH 293
Query: 246 LSMSYLGPDYSQTK--EF-----GEISIKDL-DQLARSSFPLCMRHLFDKLREDHHLKHG 297
LS Y D++Q K +F EI+ + + + S++PL +++L + L+++HHL++
Sbjct: 294 LSSGYTIADFNQQKANQFTGNVDDEINAQSVWSEEISSNYPLSIKNLMEGLKKNHHLRYY 353
Query: 298 GRMQLGLFLKGVGLRMEDALAFWKAEFSQ--KVGAERFDKEYAYSIRHNYGKEGKRTDYT 355
GR QL LFLKG+GL ++AL FW F++ + E+F+KEY YS RHNYG EG R +Y
Sbjct: 354 GRQQLSLFLKGIGLSADEALKFWSEAFTRNGNMTMEKFNKEYRYSFRHNYGLEGNRINYK 413
Query: 356 PYSCQKIISST-PGVGDHHGCPYRHFSEENLRAALGRMGVGSRAMEDVVDKVRNRHYQLA 414
P+ C I+S PG GD+HGCP+R + E L A L M + + V+D + Y +A
Sbjct: 414 PWDCHTILSKPRPGRGDYHGCPFRDWGHERLSAELRSMKLTQTQIISVLDSCQKGEYTIA 473
Query: 415 CTLTFEAVHSSSC-------DAGINHPNQYFSDS 441
CT FE H+S+ I HPN YF S
Sbjct: 474 CTKVFEMTHNSASADLEVGEQTHIAHPNLYFERS 507
>gi|158295792|ref|XP_316421.3| AGAP006387-PA [Anopheles gambiae str. PEST]
gi|157016207|gb|EAA11427.3| AGAP006387-PA [Anopheles gambiae str. PEST]
Length = 562
Score = 277 bits (709), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 156/444 (35%), Positives = 246/444 (55%), Gaps = 26/444 (5%)
Query: 23 LYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEEMENLVRDLWKANMRHP--- 79
Y P +++ +++FE A++RL++L+ + A K P+ R+ A + H
Sbjct: 30 FYLIPPIVDLTIDEFEKLALERLKMLRLLEQVTA--KNPKVSSEAWREAVLAEVNHEGLR 87
Query: 80 --------EASEDVNK-----DIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSS 126
++D +K D +SHF+LR YCR+E+LR+WF++ E L+R +F S
Sbjct: 88 TYAKLARGNLNDDASKAARRRDYLSHFILRFAYCRSEELRRWFVAREMELFRLKFGALSM 147
Query: 127 EAKRALMEEFDLPCKAISRTEFENAKEKLEQVARSFDQP-LPTADAIFYKVPFEEVPELV 185
+ +E ++L K +S E + E L A +++ L FY V F EV LV
Sbjct: 148 RDVKDFLEVYELDYKPLSDEEKLDISEHL--CASTYNHTRLKMETTDFYAVHFTEVLNLV 205
Query: 186 AGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEA 245
R+ ++ G AY+ ++ + + + L + + T+ ER ++++
Sbjct: 206 RDRKCFLKAGVAYITPEHFAHVIGKKHQQLIEDGLK-GHLRLLPTLEIDER--FAMLLKS 262
Query: 246 LSMSYLGPDYSQTKEFGEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLF 305
+ SY G +Y+ K G + ++ LDQL++ SF LCMR++ D LR HHLKH GRMQ LF
Sbjct: 263 IHTSYTGKNYTVAKT-GSVPVESLDQLSKKSFALCMRNVHDTLRATHHLKHVGRMQYTLF 321
Query: 306 LKGVGLRMEDALAFWKAEFSQ-KVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQKIIS 364
LK +G+ MEDAL FW+ E ++ KV E+F+KEYAY+IRHNYGKEG R +Y+P+SC K+I+
Sbjct: 322 LKAIGVTMEDALRFWREELTRGKVPIEKFEKEYAYAIRHNYGKEGSRINYSPFSCMKVIT 381
Query: 365 STPGVGDHHGCPYRHFSEENLRAALGRMGVGSRAMEDVVDKVRNRHYQLACTLTFEAVHS 424
+ G G+ HGCP+++ L+ L G+ + ++V HYQ+AC FE VH
Sbjct: 382 TPIGPGETHGCPFKNLDSSTLKMKLTGYGLSAIDADEVAGYATKGHYQIACGKYFEVVHE 441
Query: 425 SSCDAGINHPNQYFSDSHKILQPK 448
+ + GINHPNQYF S ++ K
Sbjct: 442 TKLEEGINHPNQYFELSQLTMEGK 465
>gi|149234481|ref|XP_001523120.1| hypothetical protein LELG_05666 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146453229|gb|EDK47485.1| hypothetical protein LELG_05666 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 518
Score = 277 bits (708), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 173/490 (35%), Positives = 266/490 (54%), Gaps = 59/490 (12%)
Query: 6 SQRSRTNTPNDSVSTLPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEEME 65
S + + N P S L Y P E+ LE+FE +A+DRL++L I +AR K P +ME
Sbjct: 21 SSKIQYNLPKLFSSRLSFYDLPPTEEITLEEFEKWAIDRLKILIEIESCIARSKTPADME 80
Query: 66 NLVRDLWKANMR---HPEASEDV-----NKDIISHFVLRLVYCRTEDLRKWFLSMETALY 117
+ +R L M A+E V KD SHF+LRLV+CR+E+LR+ F+ ET L+
Sbjct: 81 SAIRPLLLKYMPLSPSGAAAEHVIIQERMKDYYSHFILRLVFCRSEELRRKFIKNETILF 140
Query: 118 RYRFLLGSSEAKRALMEE--FDLPCKAISRTEFENAKEKL---------EQVARSFDQPL 166
R R+ + + ++ +E + LP ISR E EKL +Q + + P
Sbjct: 141 RIRYNIMQPKEQKEFIELNLYKLPWSYISREERTELFEKLFAASGHILKQQYSSDGETPF 200
Query: 167 PTADAI---------FYKVPFEEVPELVAGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLS 217
T D + F K+PFE++ +LV+ R VY+HKG+ Y+ ++L+ +F+ NL+
Sbjct: 201 -TNDQVRQMMSTRENFIKLPFEKITQLVSSRSVYLHKGYGYLPTSLQLNLLAAEFQENLN 259
Query: 218 KALILTNRKWTSTIREQERDRLTPIVEALSMSYLGPDYSQTKEFGEISIKDLDQLARSS- 276
+ LI R + + R +E DRL P++ +LS ++ Y +T E++ D++ + +S
Sbjct: 260 QILI---RTFQAIPRLEEDDRLLPLLNSLSQNFASFQY-ETDVNSELA-SDINAVTITSK 314
Query: 277 -----FPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWKAEFSQ--KVG 329
+PLC HL L + HLK+ GR QLG+FLKG+GL +++AL FW +F++ +
Sbjct: 315 QIMSHYPLCATHLQRNLSINSHLKYTGRQQLGIFLKGIGLNVDEALKFWAQQFTKNGNMS 374
Query: 330 AERFDKEYAYSIRHNYGKEGKRTDYTPYSCQKIISS-TPGVGDHHGCPYRHFSEENLRAA 388
E F+KEY Y+IRH YG EG R +Y P+ C I++ P + HGCPYR F+E L+
Sbjct: 375 QETFNKEYKYNIRHQYGLEGARINYRPWDCATILNKPKPRAKEFHGCPYRDFTEAQLKQT 434
Query: 389 LGRMGVGSRAMED---VVDKVRNRHYQLACTLTFEAVHS----SSCDAG-------INHP 434
G+ + +ED ++D V+ + Y +ACT FE H + AG INHP
Sbjct: 435 FEDKGI--KNIEDINLIMDNVQKQQYTIACTRVFELTHQKELLAQSKAGQPAQMEHINHP 492
Query: 435 NQYFSDSHKI 444
N YF S ++
Sbjct: 493 NLYFDRSRQL 502
>gi|405122711|gb|AFR97477.1| DNA primase large subunit [Cryptococcus neoformans var. grubii H99]
Length = 502
Score = 276 bits (706), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 168/474 (35%), Positives = 253/474 (53%), Gaps = 47/474 (9%)
Query: 8 RSRTNTPNDSVST-----LPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPE 62
R R +T N S L Y P L++ LE+FE A+ RLRVL I R
Sbjct: 21 RKRHSTANGVPSARYPFRLNFYERPPALDITLEEFETCAISRLRVLSHIESLSHRSLPYT 80
Query: 63 EMENLVRDLWKANM-------RHPEASEDVNKDIISHFVLRLVYCRTEDLRKWFLSMETA 115
++ + + K ++ R+ ++ KD I H+VLRL +CR+ DLR+ F+ E A
Sbjct: 81 QVASGIATYAKMHLPLSSNTARNVNLDDERRKDEIGHWVLRLAFCRSPDLRQRFVRSELA 140
Query: 116 LYRYRFLLGSSEAKRALMEEFDLPCKAISRTEFENAKEKLEQVARSFDQPLPTA---DAI 172
L++ RF + A ++ + E K++L+Q+ LP DAI
Sbjct: 141 LFKSRFETDDKNERAAFLQSLSFNYDTVGEDEKNLFKKELQQM-------LPKGSKEDAI 193
Query: 173 ---FYKVPFEEVPELVAGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTS 229
++KVP+ VP+LV RRV + G A+V +SLV+ F L KAL T +
Sbjct: 194 SETWFKVPWYTVPDLVGARRVLVKGGLAFVPQSLQLSLVLQVFADRLEKALEFTAKNLP- 252
Query: 230 TIREQERDRLTPIVEALSMSYL----GPDYSQTKEFGE---ISIKDLDQLARSSFPLCMR 282
R E +RL P+++ L+ S+L DY + E G+ ++ +D +AR FP CMR
Sbjct: 253 --RLDEDERLGPVIDHLASSFLSGIGASDYQPSDELGDGLTVTADTIDDVARKHFPPCMR 310
Query: 283 HLFDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIR 342
HL++KL++D HLKH GR+QL LFLKG+GL ++ A+ FW+ + + ++F+KEY Y+IR
Sbjct: 311 HLYEKLKKDRHLKHWGRLQLTLFLKGLGLPLDQAILFWRRSYGTSMTDDKFNKEYRYNIR 370
Query: 343 HNYGKEGKRTDYTPYSCQKIIS-STPGVGDHHGCPYRHFSEENLRAALGR-----MGVGS 396
H+YG+EG+R +Y P +CQ+I++ PG D HGCP+RHFS ENL A L S
Sbjct: 371 HSYGQEGRRANYPPKNCQQILTQDQPGTQDSHGCPFRHFSPENLTAFLTNTYPDHFSRTS 430
Query: 397 RAMEDVVDKVRNRHYQLACTLTFEAVHSSSCDAG------INHPNQYFSDSHKI 444
M D++D V+ HY +ACT FE G ++HPN++ S ++
Sbjct: 431 PEMLDILDSVKASHYHVACTRVFEITRGVRKGEGLGNGESVSHPNKWADRSREL 484
>gi|401624848|gb|EJS42887.1| pri2p [Saccharomyces arboricola H-6]
Length = 528
Score = 276 bits (705), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 163/454 (35%), Positives = 254/454 (55%), Gaps = 34/454 (7%)
Query: 19 STLPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEEMENLVRDLWKANMR- 77
S L Y PQ E+ LE FE++A+DRL++L I L+R K +E+E +++ ++ +
Sbjct: 57 SKLSFYHLPPQGEITLEQFEIWAIDRLKILLEIESCLSRNKSIKEIETIIKPQFQKLLPF 116
Query: 78 HPEASEDVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKRALMEEFD 137
+ ++ ED KD SHF+LRL +CR+++LR+ F+ ET L++ RF + +S + ++ D
Sbjct: 117 NTDSLEDKKKDYYSHFILRLCFCRSKELREKFVRAETFLFKIRFNMLTSTDQTKFVQSLD 176
Query: 138 LPCKAISRTE--FENAKEKLEQVARSFDQPLPTADA----------IFYKVPFEEVPELV 185
LP E E A + + ++ S L + F K+PFE V ELV
Sbjct: 177 LPLLQFITNEEKTELAHQLYQTISASLQFQLNLNEEHQRKQYFQQEKFIKLPFENVIELV 236
Query: 186 AGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEA 245
R V++ G+AY+ Q ++L+ +F + L++ L+ T + R E DRL PI+
Sbjct: 237 GNRLVFLKNGYAYLPQFQQLNLLSNEFANKLNEELLKT---YQYLPRLNEDDRLLPILNH 293
Query: 246 LSMSYLGPDYSQTK--EFG-----EISIKDL-DQLARSSFPLCMRHLFDKLREDHHLKHG 297
LS Y D++Q K +F EI+ + + + S++PL +++L + L+++HHL++
Sbjct: 294 LSSGYTIADFNQQKANQFSGNVDDEINAQSVWSEEISSNYPLSIKNLMEGLKKNHHLRYY 353
Query: 298 GRMQLGLFLKGVGLRMEDALAFWKAEFSQ--KVGAERFDKEYAYSIRHNYGKEGKRTDYT 355
GR QL +FLKG+GL ++AL FW F++ + E+F+KEY YS RHNYG EG R +Y
Sbjct: 354 GRQQLSMFLKGIGLSADEALKFWSEAFTRNGNMTMEKFNKEYRYSFRHNYGLEGNRINYK 413
Query: 356 PYSCQKIISST-PGVGDHHGCPYRHFSEENLRAALGRMGVGSRAMEDVVDKVRNRHYQLA 414
P+ C I+S PG GD+HGCP+R +S E L A L M + + V+D + Y +A
Sbjct: 414 PWDCHTILSKPRPGRGDYHGCPFRDWSAERLTAELRSMKLTQAQIISVLDSCQKGEYTIA 473
Query: 415 CTLTFEAVHSS-SCDAGIN------HPNQYFSDS 441
CT FE H+S S D I HPN YF S
Sbjct: 474 CTKVFEMTHNSGSADLEIGEQTHIAHPNLYFERS 507
>gi|328778333|ref|XP_624130.2| PREDICTED: DNA primase large subunit [Apis mellifera]
Length = 555
Score = 276 bits (705), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 152/446 (34%), Positives = 250/446 (56%), Gaps = 31/446 (6%)
Query: 21 LPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARG---KRPEEMENLVRDLWKANMR 77
L +Y + P E+ L +FE +RL++L+ + + R + + +NL L K ++
Sbjct: 30 LHMYDFPPTGEISLTEFEELGRERLKLLQHVENNAIRTDFKTQEDRKQNLHTALMKDGLK 89
Query: 78 H-----------PEASEDVN---KDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLL 123
+ D+ KD ISHF+ RL +C+ D + WF++ E L++ RF
Sbjct: 90 YFAHLLYAKGCKSPTETDLQYRRKDHISHFISRLSHCQESDRQMWFINQEIELFKLRFSS 149
Query: 124 GSSEAKRALMEEFDLPCKAISRTEFENAKEKLEQVARSFDQPLPTADAIFYKVPFEEVPE 183
E L+ ++ C+ I++ E + +E+L +++ S + L FYKV F V +
Sbjct: 150 LDKEGIEKLLSMHNIDCQQITQEEKDEIREEL-RLSTSSIKVLNIDMTEFYKVSFYRVSD 208
Query: 184 LVAGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIV 243
L+ RRVY+ +G AY+ +VSL ++ FR NL + S IR DR+ +
Sbjct: 209 LIRSRRVYLSQGIAYIPQIDLVSLFLSYFRKNLLDGMPAAK---MSIIRMHGDDRIQSYL 265
Query: 244 EALSMSYLGPDYSQTK----EFGEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGR 299
+++ P+ S LD+L+++S+P+CMR L + L+ +HHLK+ GR
Sbjct: 266 KSV------PNISDKTCVIWTSSATPTDKLDELSKTSYPMCMRILHEALKSNHHLKNSGR 319
Query: 300 MQLGLFLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSC 359
+Q GLF+KG+G+ MED+L+FWK EF++K+ + +FDKEYAY+IRH YGKEG++T+YTP C
Sbjct: 320 IQYGLFIKGIGVTMEDSLSFWKTEFTKKIDSVKFDKEYAYTIRHTYGKEGRQTNYTPLGC 379
Query: 360 QKIISSTPGVGDHHGCPYRHFSEENLRAALGRMGVGSRAMEDVVDKVRNRHYQLACTLTF 419
QKI+SS G+ +GCPY+H +L+ L G+ + ++ ++ + ++ +Y ACT F
Sbjct: 380 QKIMSSVQSPGEFNGCPYKHMDNASLKQKLFSYGIPAASINEITELAKSDNYFGACTAYF 439
Query: 420 EAVHSSSCDAGINHPNQYFSDSHKIL 445
+ +H+ D I HPN YF +S IL
Sbjct: 440 KVLHNRLPDKPIIHPNGYFLESRTIL 465
>gi|367025369|ref|XP_003661969.1| hypothetical protein MYCTH_2301942 [Myceliophthora thermophila ATCC
42464]
gi|347009237|gb|AEO56724.1| hypothetical protein MYCTH_2301942 [Myceliophthora thermophila ATCC
42464]
Length = 501
Score = 276 bits (705), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 171/454 (37%), Positives = 240/454 (52%), Gaps = 37/454 (8%)
Query: 21 LPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEEMENLVRDLWKANMRHPE 80
L Y P ++ LE FE +A+DRLRVL + R K P E E ++ L +R
Sbjct: 33 LNFYTTPPTADITLEQFEQWAIDRLRVLAELEACSFRNKTPAETELHMKPLLDKYLRLDA 92
Query: 81 ASEDVN-------KDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKRALM 133
S + KD SHF+LRL + TEDLR+ F ET L+R RF S + A +
Sbjct: 93 NSSTASPLHAQRQKDHYSHFILRLAFASTEDLRRRFARAETMLFRLRFQTDDSRERAAFI 152
Query: 134 EEFDLPCKAISRTEFENAKEKLEQVARSFDQPLPTADAIFYKVPFEEVPELVAGRRVYIH 193
+L + +S E +L + D + KV + VP+L+ R+VY+
Sbjct: 153 RTLNLDWEPVSDEEKRELAPQLASTIGYGKRAPQVLDEDWLKVDWTRVPDLIENRKVYVR 212
Query: 194 KGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEALSMSYLGP 253
G AYV + S+V+ F L L LT R + R E DRLTPI++ LS +++ P
Sbjct: 213 AGKAYVPGKEQQSMVLNAFTKRLETELELTAR---ALPRLDEDDRLTPILDHLSKNFIAP 269
Query: 254 DYSQTK-----EFGEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKG 308
D S E EI+ +++D L++ FP+CM HL LR D HLKH GR+Q LFLKG
Sbjct: 270 DASYAGSGAAIEGAEITARNIDNLSQH-FPMCMTHLHRSLRRDAHLKHYGRLQYTLFLKG 328
Query: 309 VGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTD-----YTPYSCQKII 363
+GL +E++L FW++ F+ K+ + F+KEY Y++RH YG G ++ Y+PYSCQKI+
Sbjct: 329 IGLSLEESLIFWRSAFN-KITDDTFNKEYRYNVRHAYGDVGGDSNRRSGGYSPYSCQKIL 387
Query: 364 SS-TPGVGDHHGCPYRHFSEENLRAALGRMGVGSRA-MEDVVDKVRNRHYQLACTLTFEA 421
+ PG G+ HGCPYRHFS ENL L GV RA +E V N+ + +AC FE
Sbjct: 388 TEHAPGPGEAHGCPYRHFSPENLTTLLRASGVTDRAVLEGVKVDTENQKFHMACNRVFEH 447
Query: 422 VHSSSC----DAGIN---------HPNQYFSDSH 442
+H + D GI HPN+YF S+
Sbjct: 448 LHKAEIKRAKDEGIMTAAQLETIVHPNEYFKRSY 481
>gi|50310557|ref|XP_455298.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49644434|emb|CAG98006.1| KLLA0F04818p [Kluyveromyces lactis]
Length = 493
Score = 275 bits (704), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 154/447 (34%), Positives = 244/447 (54%), Gaps = 27/447 (6%)
Query: 19 STLPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEEMENLVRDLWKANMRH 78
+ L YR P+ E+ LE FE +A+DRL+VL + R K +E+E ++ + + +
Sbjct: 43 TKLTWYRLPPKGEITLEQFETWAIDRLKVLLELESLWQRNKSMKEIETTIKPVLSSKLNL 102
Query: 79 PEASEDVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKRALMEEFDL 138
+E KD SHF+LRL +CR+++LR F+ ET L++ RF + +++ + + DL
Sbjct: 103 GNDNESRKKDYYSHFILRLCFCRSKELRDKFVRAETLLFKIRFQMLTTQDQLNFISSLDL 162
Query: 139 P-CKAISRTEFENAKEKLEQVAR---SFDQPLPTADA--------IFYKVPFEEVPELVA 186
P +I E ++ +L Q +F L +YK+P E V +LV
Sbjct: 163 PYVNSIDEEEKQSLSTELYQTVSHLLTFQLNLTEETQRRQFFNREKYYKLPMENVMDLVG 222
Query: 187 GRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEAL 246
R+++I KG AYV Q ++L+ +F L L+ T + + E DR+ PI+ L
Sbjct: 223 SRQIFIKKGWAYVPQFQQLNLISNEFSDCLQTELMGT---YQMIPKLNEDDRILPILHHL 279
Query: 247 SMSYLGPDYSQ------TKEFGEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRM 300
S Y+ + + EF S+K + FPLC + L ++L+ +HHL++ GR
Sbjct: 280 SSGYVVTESQELNGAGVNDEFTHRSVK--TKKVMEHFPLCAKQLMEQLQTNHHLRYQGRQ 337
Query: 301 QLGLFLKGVGLRMEDALAFWKAEFSQ--KVGAERFDKEYAYSIRHNYGKEGKRTDYTPYS 358
QL FLKG+GL +++AL FW F+ K+ ++F+KEY Y+ RHNYG EG R +Y P+
Sbjct: 338 QLSFFLKGIGLSVDEALQFWTESFTSGGKMTVDQFNKEYKYNFRHNYGLEGNRINYKPWD 397
Query: 359 CQKIISST-PGVGDHHGCPYRHFSEENLRAALGRMGVGSRAMEDVVDKVRNRHYQLACTL 417
C+ I+S P G++HGCPYR + + L A L M + + + VV+ + + Y +ACT
Sbjct: 398 CRTILSKPRPSRGEYHGCPYRDYHPDKLVATLKEMSLTQQQVNSVVESCQQQDYTIACTK 457
Query: 418 TFEAVH-SSSCDAGINHPNQYFSDSHK 443
FEAVH +++ D I HPNQYF S +
Sbjct: 458 VFEAVHKTTTADLQIVHPNQYFERSRQ 484
>gi|322693251|gb|EFY85118.1| DNA primase large subunit [Metarhizium acridum CQMa 102]
Length = 501
Score = 275 bits (702), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 174/457 (38%), Positives = 249/457 (54%), Gaps = 43/457 (9%)
Query: 21 LPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEE----MENLVRDLWKANM 76
L Y AP ++ LE FE +A+DRLRVL + R + P E M+ ++ +
Sbjct: 38 LNFYTDAPTADITLEQFEQWAIDRLRVLAELEACSFRNRTPAETAAHMKPILDKYLPLDT 97
Query: 77 RHPEAS---EDVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKRALM 133
R A KD SHF+LRL + TEDLR+ F +ET L+R RF + A +
Sbjct: 98 RGSSADRLFSQRQKDHYSHFILRLAFSSTEDLRRRFTRVETMLFRLRFNNDDLSERSAFV 157
Query: 134 EEFDLPC-KAISRTEFENAKEKLEQVARSFDQPLPTA--DAIFYKVPFEEVPELVAGRRV 190
DL +A++ E +E +A P +A D ++KV +E VPEL+ GRRV
Sbjct: 158 SSLDLDWWEAVTDDE---KREYAADLAAMATGPKKSAAEDDTWFKVDWERVPELIEGRRV 214
Query: 191 YIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEALSMSY 250
++ +G A+V + S+VV +F S L K L LT R + R E DRLTPI+ LS ++
Sbjct: 215 FLKQGKAFVPAREQSSMVVAEFSSRLEKQLELTAR---ALPRLDEDDRLTPILNHLSKNF 271
Query: 251 LGPDY-----SQTKEFGEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLF 305
+ PD S +I+ ++D L++ FP CM HL LR D HLKH GR+Q LF
Sbjct: 272 ITPDSAYASNSSAPAGAQITASNIDNLSQH-FPACMSHLHRSLRRDAHLKHYGRLQYTLF 330
Query: 306 LKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTD-----YTPYSCQ 360
LKG+GL +E+ L FW+ F K+ ++F+KEY Y++RH YG G ++ Y+P+SCQ
Sbjct: 331 LKGIGLNLEECLMFWRNSF-HKITDDQFNKEYRYNVRHAYGDVGGDSNRRGGGYSPFSCQ 389
Query: 361 KIISS-TPGVGDHHGCPYRHFSEENLRAALGRMGVGSRA-MEDVVDKVRNRHYQLACTLT 418
KI++ PG G+ HGCPYRHF+ ENL A + MGV R+ ++ V + N+ Y +AC
Sbjct: 390 KILTEHPPGPGEAHGCPYRHFNLENLTALVQAMGVSDRSVLQGVKEDKDNQKYHMACNRV 449
Query: 419 FEAVHSSSC----DAG---------INHPNQYFSDSH 442
FE +H + D G I HPN+YF S+
Sbjct: 450 FEHLHKAEIKKAKDEGVMTSNQLETIVHPNEYFKRSY 486
>gi|322709139|gb|EFZ00715.1| DNA primase large subunit [Metarhizium anisopliae ARSEF 23]
Length = 501
Score = 274 bits (701), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 173/457 (37%), Positives = 250/457 (54%), Gaps = 43/457 (9%)
Query: 21 LPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEE----MENLVRDLWKANM 76
L Y AP ++ LE FE +A+DRLRVL + R + P E M+ ++ +
Sbjct: 38 LNFYTDAPTADITLEQFEQWAIDRLRVLAELEACSFRNRTPAETAAHMKPILDKYLPLDT 97
Query: 77 RHPEAS---EDVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKRALM 133
R A KD SHF+LRL + TEDLR+ F +ET L+R RF + A +
Sbjct: 98 RGSSADRLFSQRQKDHYSHFILRLAFSSTEDLRRRFTRVETMLFRLRFNNDDLSERSAFV 157
Query: 134 EEFDLPC-KAISRTEFENAKEKLEQVARSFDQPLPTA--DAIFYKVPFEEVPELVAGRRV 190
DL +A++ E +E +A P +A D +++KV +E VPELV GRRV
Sbjct: 158 SSLDLDWWEAVTDDE---KREYAADLAAMATGPKKSAAEDEMWFKVDWERVPELVEGRRV 214
Query: 191 YIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEALSMSY 250
++ +G AYV + S+VV +F S L K L +T R + R E DRLTPI+ LS ++
Sbjct: 215 FLKQGKAYVPAREQSSMVVAEFSSRLEKQLEMTAR---ALPRLDEDDRLTPILNHLSKNF 271
Query: 251 LGPDYSQTKEF-----GEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLF 305
+ PD + T +I+ ++D L++ FP CM HL LR D HLKH GR+Q LF
Sbjct: 272 ITPDSAYTSNSSAPAGAQITASNIDNLSQH-FPACMSHLHRSLRRDAHLKHFGRLQYTLF 330
Query: 306 LKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTD-----YTPYSCQ 360
LKG+GL +E+ L FW++ F K+ ++F+K+Y Y++RH YG G ++ Y+P+SCQ
Sbjct: 331 LKGIGLNLEECLMFWRSSF-HKITDDQFNKDYRYNVRHAYGDVGGDSNRRGGGYSPFSCQ 389
Query: 361 KIISS-TPGVGDHHGCPYRHFSEENLRAALGRMGVGSRA-MEDVVDKVRNRHYQLACTLT 418
KI++ PG G+ HGCPYRHF ENL A + MGV R+ ++ V + + Y +AC
Sbjct: 390 KILTEHPPGPGEAHGCPYRHFDLENLTALVQAMGVSDRSVLQGVKEDKDTQKYHMACNRV 449
Query: 419 FEAVHSSSC----DAG---------INHPNQYFSDSH 442
FE +H + D G I HPN+YF S+
Sbjct: 450 FEHLHKAEIKKAKDEGVMTSNQLETIVHPNEYFKRSY 486
>gi|402076186|gb|EJT71609.1| DNA primase large subunit [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 504
Score = 274 bits (700), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 169/455 (37%), Positives = 242/455 (53%), Gaps = 42/455 (9%)
Query: 23 LYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEE----MENLVRDLWKANMRH 78
Y P ++ LE FE +A+DRLR+L + R K P E M+ L+ +
Sbjct: 39 FYSTPPTADITLEQFEQWAIDRLRILAELEACSFRNKSPPETALHMKPLLDKYLPLDSNS 98
Query: 79 PEASE---DVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKRALMEE 135
+S+ KD HF+LRL +C TEDLR+ F +ET L+R R S + A +
Sbjct: 99 SASSQLQAQRQKDHYGHFILRLAFCSTEDLRRRFSRIETMLFRLRLTADDSRERAAFVAS 158
Query: 136 FD-LPCKAISRTEFENAKEKLEQVARSFDQPLPTADAIFYKVPFEEVPELVAGRRVYIHK 194
L ++ E +L A QP D + KV ++ VP+LV GRRV+I
Sbjct: 159 IGGLAWDPLTDDERRELSTELAATAGWKTQP---EDETWCKVDWDRVPDLVEGRRVFIRG 215
Query: 195 GHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEALSMSYLGPD 254
G A+V + +S+VV++F + L K L LT R + R E DRLTPI+ LS +++ PD
Sbjct: 216 GKAFVPGKEQMSMVVSEFTARLDKTLELTAR---ALPRLDEDDRLTPILNHLSKNFITPD 272
Query: 255 YS-------QTKEFGEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLK 307
S T E++ +++D+LA FPLCM+HL LR D HLKH GR+Q LFLK
Sbjct: 273 ASYRSGDGDSTAPGSELTARNVDKLATEHFPLCMQHLHRSLRRDAHLKHFGRLQYTLFLK 332
Query: 308 GVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEG-----KRTDYTPYSCQKI 362
G+GL +E+ L FW++ F K+ + F+KEY Y++RH YG G + T Y P+ CQKI
Sbjct: 333 GIGLSLEECLLFWRSSF-HKITDDTFNKEYRYNVRHIYGDVGGDANRRGTGYPPFGCQKI 391
Query: 363 ISS-TPGVGDHHGCPYRHFSEENLRAALGRMGVGSRA-MEDVVDKVRNRHYQLACTLTFE 420
++ PG G+ HGCPYRHF+ ENL A L ++G+ RA + V + + + LAC FE
Sbjct: 392 LTEHPPGPGEAHGCPYRHFNLENLTALLQQVGINDRAVLTGVREDKEKQKFHLACNRVFE 451
Query: 421 AVHSSSCDAG-------------INHPNQYFSDSH 442
+H + I HPN+YF S+
Sbjct: 452 HIHKNEIKRAKDENIMTGAQLETIVHPNEYFKRSY 486
>gi|320033298|gb|EFW15246.1| DNA primase large subunit [Coccidioides posadasii str. Silveira]
Length = 502
Score = 274 bits (700), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 176/468 (37%), Positives = 245/468 (52%), Gaps = 46/468 (9%)
Query: 11 TNTPNDSVSTLPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEE----MEN 66
T D L Y P E+ LE FE +A+DRLR+L + R K PEE +++
Sbjct: 28 TYKQQDYAHRLNFYEVPPTAEITLEQFEQWAIDRLRILSELEACSYRNKTPEETTEHIKS 87
Query: 67 LVRDLWKANMRHPEASEDVN-------KDIISHFVLRLVYCRTEDLRKWFLSMETALYRY 119
L+R S D KD SHF+LRL + TEDLR+ F+ +ET L+++
Sbjct: 88 LIRKFLPLRSNRDAGSRDSQGLRDERQKDHYSHFILRLAFSSTEDLRRRFVRLETMLFKF 147
Query: 120 RFLLGSSEAKRALMEEFDLPCKAISRTEFENAKEKLEQVARSFDQPLPTADAIFYKVPFE 179
RF L S + A +E + +S E + K +L P D ++KV +E
Sbjct: 148 RFQLDDSAEREAFVESLNFDWDILSEEEKDELKNELHATT-----PGVKRDKGWFKVDWE 202
Query: 180 EVPELVAGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRL 239
+VPELV R V++ KG AYV + + S+++ +F + L KAL T+R + R E DRL
Sbjct: 203 KVPELVERRSVFVKKGKAYVPLGEQQSMILAEFSARLEKALEFTSR---ALPRLDEDDRL 259
Query: 240 TPIVEALSMSYLGPDYSQTKEFGE-----ISIKDLDQLARSSFPLCMRHLFDKLREDHHL 294
PI+E LS ++ D S ++ G I+ +D L+ + FPLCMR+L +LR++ HL
Sbjct: 260 IPILEHLSKNFGTSDTSYSEGEGAVPGAPITAASIDVLS-NHFPLCMRNLHMQLRKNAHL 318
Query: 295 KHGGRMQLGLFLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTD- 353
KH GR+Q LFLKG+GL +ED + FW+ F E F+ +Y Y+IRH YG G +
Sbjct: 319 KHFGRLQYTLFLKGIGLSLEDCILFWRQSFRNFTDDE-FNSKYKYNIRHAYGDVGGDANR 377
Query: 354 ----YTPYSCQKIIS-STPGVGDHHGCPYRHFSEENLRAALGRMGVGSR-AMEDVVDKVR 407
Y PYSCQKI++ + PG G HGCPYRHFS +NL A L GV R + V + V
Sbjct: 378 RGRGYPPYSCQKILTDNAPGAGQTHGCPYRHFSVDNLIALLQATGVNDRETLHGVREDVG 437
Query: 408 NRHYQLACTLTFEAVHS------------SSCDAG-INHPNQYFSDSH 442
Y +AC FE VH SS D I HPN +F S+
Sbjct: 438 RMRYHIACNRVFEYVHKDELRKVKDEGIMSSTDLDTIVHPNTFFKRSY 485
>gi|154304318|ref|XP_001552564.1| hypothetical protein BC1G_08429 [Botryotinia fuckeliana B05.10]
Length = 502
Score = 274 bits (700), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 172/454 (37%), Positives = 249/454 (54%), Gaps = 39/454 (8%)
Query: 21 LPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEEMENLVRDLWKANM---- 76
L Y P ++ LE FE +A+DRLRVL + R + P E ++ L +
Sbjct: 37 LNFYTIPPTADITLEQFEQWAIDRLRVLAELEACSFRNRTPAETAAHMKPLLDKYLPLSA 96
Query: 77 ---RHPEASEDVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKRALM 133
+ KD SHF+LRL + TEDLR+ F +E+ L+R RF +++ +
Sbjct: 97 SSSGSSALQSERQKDHYSHFILRLAFASTEDLRRRFSRVESMLFRLRFQADDLRERQSFV 156
Query: 134 EEFDLPCKAISRTEFENAKEKLEQVARSFDQPLPTADAIFYKVPFEEVPELVAGRRVYIH 193
E +L + +S E + E+L+ A L + ++KV +E VPELV RRV++
Sbjct: 157 EGLNLDWETVSEDEKRDYWEQLKGAAGR--DKLIIEEESWFKVDWERVPELVESRRVFLK 214
Query: 194 KGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEALSMSYLGP 253
G AYV + +S+VV +F S L KAL +T+R + R E DRLTPI+ LS ++ P
Sbjct: 215 GGKAYVHSREQLSMVVAEFTSRLDKALEITSR---ALPRLDEDDRLTPILTHLSQNFTTP 271
Query: 254 D--YSQ---TKEFGEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKG 308
D YS T + +IS +++D L+ SSFPLCM++L LR D HLKH GR+Q LFLKG
Sbjct: 272 DANYSNSATTVDGADISARNVDALS-SSFPLCMQNLHKSLRRDAHLKHYGRLQYTLFLKG 330
Query: 309 VGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTD-----YTPYSCQKII 363
+GL +E+ L FW++ FS K+ + F+KEY Y++RH YG G ++ Y+P+SCQKI+
Sbjct: 331 IGLNLEECLVFWRSSFS-KITDDVFNKEYRYNVRHAYGDVGGDSNRRGNGYSPFSCQKIL 389
Query: 364 SS-TPGVGDHHGCPYRHFSEENLRAALGRMGVGS-RAMEDVVDKVRNRHYQLACTLTFEA 421
+ PG G+ HGCPYRHFS +NL + L +GV + V + + + LAC FE
Sbjct: 390 TEHPPGPGESHGCPYRHFSVDNLTSLLRAVGVNDHEVLRGVKEDKEKQKFHLACNRVFEY 449
Query: 422 VHSSSC----DAG---------INHPNQYFSDSH 442
H D G I HPN+YF S+
Sbjct: 450 AHKQEIKKVKDDGTWGAAQLETIVHPNEYFKRSY 483
>gi|119189531|ref|XP_001245372.1| hypothetical protein CIMG_04813 [Coccidioides immitis RS]
gi|392868275|gb|EAS34040.2| DNA primase large subunit [Coccidioides immitis RS]
Length = 502
Score = 273 bits (699), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 176/468 (37%), Positives = 245/468 (52%), Gaps = 46/468 (9%)
Query: 11 TNTPNDSVSTLPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEE----MEN 66
T D L Y P E+ LE FE +A+DRLR+L + R K PEE +++
Sbjct: 28 TYKQQDYAHRLNFYEVPPTAEITLEQFEQWAIDRLRILSELEACSYRNKTPEETTEHIKS 87
Query: 67 LVRDLWKANMRHPEASEDVN-------KDIISHFVLRLVYCRTEDLRKWFLSMETALYRY 119
L+R S D KD SHF+LRL + TEDLR+ F+ +ET L+++
Sbjct: 88 LIRKFLPLRSNRDAGSRDNQGLRHERQKDHYSHFILRLAFSSTEDLRRRFVRLETMLFKF 147
Query: 120 RFLLGSSEAKRALMEEFDLPCKAISRTEFENAKEKLEQVARSFDQPLPTADAIFYKVPFE 179
RF L S + A +E + +S E + K +L P D ++KV +E
Sbjct: 148 RFQLDDSAEREAFVESLNFDWDILSEEEKDELKNELHATT-----PGVKRDKGWFKVDWE 202
Query: 180 EVPELVAGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRL 239
+VPELV R V++ KG AYV + + S+++ +F + L KAL T+R + R E DRL
Sbjct: 203 KVPELVERRSVFVKKGKAYVPLGEQQSMILAEFSARLEKALEFTSR---ALPRLDEDDRL 259
Query: 240 TPIVEALSMSYLGPDYSQTKEFGE-----ISIKDLDQLARSSFPLCMRHLFDKLREDHHL 294
PI+E LS ++ D S ++ G I+ +D L+ + FPLCMR+L +LR++ HL
Sbjct: 260 IPILEHLSKNFGTSDTSYSEGEGAVPGAPITAASIDVLS-NHFPLCMRNLHMQLRKNAHL 318
Query: 295 KHGGRMQLGLFLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTD- 353
KH GR+Q LFLKG+GL +ED + FW+ F E F+ +Y Y+IRH YG G +
Sbjct: 319 KHFGRLQYTLFLKGIGLSLEDCILFWRQSFRNFTDDE-FNSKYKYNIRHAYGDVGGDANR 377
Query: 354 ----YTPYSCQKIIS-STPGVGDHHGCPYRHFSEENLRAALGRMGVGSR-AMEDVVDKVR 407
Y PYSCQKI++ + PG G HGCPYRHFS +NL A L GV R + V + V
Sbjct: 378 RGRGYPPYSCQKILTDNAPGAGQTHGCPYRHFSVDNLVALLQATGVNDRETLHGVREDVG 437
Query: 408 NRHYQLACTLTFEAVHS------------SSCDAG-INHPNQYFSDSH 442
Y +AC FE VH SS D I HPN +F S+
Sbjct: 438 RMRYHIACNRVFEYVHKDELRKVKDEGIMSSTDLDTIVHPNTFFKRSY 485
>gi|444322852|ref|XP_004182067.1| hypothetical protein TBLA_0H02640 [Tetrapisispora blattae CBS 6284]
gi|387515113|emb|CCH62548.1| hypothetical protein TBLA_0H02640 [Tetrapisispora blattae CBS 6284]
Length = 495
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 167/473 (35%), Positives = 256/473 (54%), Gaps = 42/473 (8%)
Query: 13 TPNDSVSTLPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEEMENLVRDLW 72
T + S+S L Y AP E+ L++FE++A+DRL+VL I L+R K ++E V+ +
Sbjct: 29 TNDSSISKLNFYNIAPTQEITLDNFEIWAIDRLKVLIEIETMLSRSKNIRDIETSVKPIL 88
Query: 73 KANMRHPEASEDVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKRAL 132
+ A ED KD SHF+LRL +CR+++LR F++ ET L++ R+ + +S +
Sbjct: 89 NKYLPMNTA-EDQEKDYYSHFILRLCFCRSKELRARFINTETILFKLRYNMLTSSEQTKF 147
Query: 133 MEEFDL-PCKAISRTEFENAKEKLEQVARSFDQPLPT---------------ADAIFYKV 176
+E+ L K IS E K + S PL T + F K+
Sbjct: 148 VEDLQLDSLKYISDDE----KNEFSTELYSMISPLLTFQLNLTDENSKRLFFQNEKFIKL 203
Query: 177 PFEEVPELVAGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQER 236
PFE V EL++ R+V++HKG AY+ Q ++L+ +F L +L+ T ++ + E
Sbjct: 204 PFENVTELLSNRQVFLHKGWAYIGQFQQLNLLTNEFSQKLETSLLKT---YSILPKLNED 260
Query: 237 DRLTPIVEALSMSY------LGPDYSQTKEFGEISIKD---LDQLARSSFPLCMRHLFDK 287
DRL PI++ LS Y +G Y GE I D+ ++PL + +L +
Sbjct: 261 DRLLPIIQHLSSGYNLSDLSIGSSYLSGNATGEGEITSDMIYDKEMMKNYPLSVLNLLEG 320
Query: 288 LREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWKAEFSQKVGA----ERFDKEYAYSIRH 343
LRE+HHL++ GR QLG+FLKG+GL +++AL FW EF GA ++F+KEY Y+IRH
Sbjct: 321 LRENHHLRYNGRQQLGMFLKGIGLSVDEALKFWANEFVYAPGAHMTLDKFNKEYRYNIRH 380
Query: 344 NYGKEGKRTDYTPYSCQKIISST-PGVGDHHGCPYRHFSEENLRAAL-GRMGVGSRAMED 401
YG EG R +Y P+ + I+S P G++HGCPYR +S E L + L +MG+ +
Sbjct: 381 TYGLEGNRINYKPWDFRTILSKPRPARGEYHGCPYRDWSHEKLTSYLKTKMGLSLSQINQ 440
Query: 402 VVDKVRNRHYQLACTLTFEAVHSSSCDA--GINHPNQYFSDSHKILQPKNNNA 452
V++ V + Y +A T FE + I HPNQYF D + + + +NA
Sbjct: 441 VMESVEQQEYAMASTKVFEMTIGKLPEGVTHIVHPNQYF-DLARAIHKRQSNA 492
>gi|347828164|emb|CCD43861.1| similar to DNA primase large subunit [Botryotinia fuckeliana]
Length = 502
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 172/454 (37%), Positives = 249/454 (54%), Gaps = 39/454 (8%)
Query: 21 LPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEEMENLVRDLWKANM---- 76
L Y P ++ LE FE +A+DRLRVL + R + P E ++ L +
Sbjct: 37 LNFYTIPPTADITLEQFEQWAIDRLRVLAELEACSFRNRTPAETAAHMKPLLDKYLPLSA 96
Query: 77 ---RHPEASEDVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKRALM 133
+ KD SHF+LRL + TEDLR+ F +E+ L+R RF +++ +
Sbjct: 97 SSSGSSALQSERQKDHYSHFILRLSFASTEDLRRRFSRVESMLFRLRFQADDLRERQSFV 156
Query: 134 EEFDLPCKAISRTEFENAKEKLEQVARSFDQPLPTADAIFYKVPFEEVPELVAGRRVYIH 193
E +L + +S E + E+L+ A L + ++KV +E VPELV RRV++
Sbjct: 157 EGLNLDWETVSEDEKRDYWEQLKGAAGR--DKLIIEEESWFKVDWERVPELVESRRVFLK 214
Query: 194 KGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEALSMSYLGP 253
G AYV + +S+VV +F S L KAL +T+R + R E DRLTPI+ LS ++ P
Sbjct: 215 GGKAYVHSREQLSMVVAEFTSRLDKALEITSR---ALPRLDEDDRLTPILTHLSQNFTTP 271
Query: 254 D--YSQ---TKEFGEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKG 308
D YS T + +IS +++D L+ SSFPLCM++L LR D HLKH GR+Q LFLKG
Sbjct: 272 DANYSNSATTVDGADISARNVDALS-SSFPLCMQNLHKSLRRDAHLKHYGRLQYTLFLKG 330
Query: 309 VGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTD-----YTPYSCQKII 363
+GL +E+ L FW++ FS K+ + F+KEY Y++RH YG G ++ Y+P+SCQKI+
Sbjct: 331 IGLNLEECLVFWRSSFS-KITDDVFNKEYRYNVRHAYGDVGGDSNRRGNGYSPFSCQKIL 389
Query: 364 SS-TPGVGDHHGCPYRHFSEENLRAALGRMGVGS-RAMEDVVDKVRNRHYQLACTLTFEA 421
+ PG G+ HGCPYRHFS +NL + L +GV + V + + + LAC FE
Sbjct: 390 TEHPPGPGESHGCPYRHFSVDNLTSLLRAVGVNDHEVLRGVKEDKEKQKFHLACNRVFEY 449
Query: 422 VHSSSC----DAG---------INHPNQYFSDSH 442
H D G I HPN+YF S+
Sbjct: 450 AHKQEIKKVKDDGTWGAAQLETIVHPNEYFKRSY 483
>gi|171692437|ref|XP_001911143.1| hypothetical protein [Podospora anserina S mat+]
gi|170946167|emb|CAP72968.1| unnamed protein product [Podospora anserina S mat+]
Length = 503
Score = 273 bits (698), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 172/466 (36%), Positives = 253/466 (54%), Gaps = 39/466 (8%)
Query: 11 TNTPNDSVSTLPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEE----MEN 66
T P L Y P ++ LE FE +A+DRLR+L + R K P E ME
Sbjct: 23 TYQPQQYPHRLNFYTTPPTADITLEQFEQWAIDRLRILAELEACSFRNKTPAETAAHMEP 82
Query: 67 LVRD---LWKANMRHPEASEDVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLL 123
L++ L + H + KD SHF+LRL + TEDLR+ F +E+ L+R RF
Sbjct: 83 LLKKYLPLDNNSSNHSQLFAQRQKDHYSHFILRLAFSSTEDLRRRFTRVESMLFRLRFQG 142
Query: 124 GSSEAKRALMEEFDLPCKAISRTE-FENAKEKLEQVARSFDQPLPTA-DAIFYKVPFEEV 181
+ + A + +L + +S E E A E V S + PT D + KV +E V
Sbjct: 143 DDMKERNAFVRTLNLDWEPVSEEEKTELAAELAATVGFSGKRGQPTVQDEEWSKVDWERV 202
Query: 182 PELVAGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTP 241
P+L+ R+V++ +G AYV + S+V+T+F + L K+L LT R + R E DRLTP
Sbjct: 203 PDLIEHRKVFVKRGKAYVPSREQQSMVMTEFNARLEKSLELTAR---ALPRLDEDDRLTP 259
Query: 242 IVEALSMSYLGPDYSQTK-----EFGEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKH 296
I+ LS +++ PD T E EIS +++D L++ FP+CM HL LR D L+H
Sbjct: 260 ILNHLSKNFIAPDSVYTNSSSAIEGAEISARNIDNLSQH-FPMCMAHLHRTLRRDSKLRH 318
Query: 297 GGRMQLGLFLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTD--- 353
GR+Q LFLKG+GL +E+ L FW++ F+ K+ + F+K Y Y++RH YG G ++
Sbjct: 319 FGRLQYTLFLKGIGLNLEECLVFWRSSFN-KMTDDEFNKGYRYNVRHVYGDVGGDSNRRS 377
Query: 354 --YTPYSCQKIISS-TPGVGDHHGCPYRHFSEENLRAALGRMGVGSRA-MEDVVDKVRNR 409
Y+PYSCQKI++ PG G+ HGCPYRHF E+NL L +G+ + ++ V + + +
Sbjct: 378 GGYSPYSCQKILTEHAPGNGEAHGCPYRHFDEQNLMTLLEGVGISDKGVLQGVREDKQKQ 437
Query: 410 HYQLACTLTFEAVHSSSC----DAGIN---------HPNQYFSDSH 442
+ +AC FE VH + D GI HPN+YF S+
Sbjct: 438 KFHMACNRVFEYVHKNELRRAKDEGIMTAAQLETIVHPNEYFKRSY 483
>gi|303323015|ref|XP_003071499.1| Eukaryotic-type DNA primase, large subunit family protein
[Coccidioides posadasii C735 delta SOWgp]
gi|240111201|gb|EER29354.1| Eukaryotic-type DNA primase, large subunit family protein
[Coccidioides posadasii C735 delta SOWgp]
Length = 502
Score = 272 bits (696), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 175/468 (37%), Positives = 245/468 (52%), Gaps = 46/468 (9%)
Query: 11 TNTPNDSVSTLPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEE----MEN 66
T D L Y P E+ LE FE +A+DRLR+L + R K PEE +++
Sbjct: 28 TYKQQDYAHRLNFYEVPPTAEITLEQFEQWAIDRLRILSELEACSYRNKTPEETTEHIKS 87
Query: 67 LVRDLWKANMRHPEASEDVN-------KDIISHFVLRLVYCRTEDLRKWFLSMETALYRY 119
L+R S D KD SHF+LRL + TEDLR+ F+ +ET L+++
Sbjct: 88 LIRKFLPLRSNRDAGSRDSQGLRDERQKDHYSHFILRLAFSSTEDLRRRFVRLETMLFKF 147
Query: 120 RFLLGSSEAKRALMEEFDLPCKAISRTEFENAKEKLEQVARSFDQPLPTADAIFYKVPFE 179
RF L S + A +E + +S E + K +L P D ++KV +E
Sbjct: 148 RFQLDDSAEREAFVESLNFDWDILSEEEKDELKNELHATT-----PGVKRDKGWFKVDWE 202
Query: 180 EVPELVAGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRL 239
+VPELV R V++ KG AYV + + S+++ +F + L KAL T+R + R E +RL
Sbjct: 203 KVPELVERRSVFVKKGKAYVPLGEQQSMILAEFSARLEKALEFTSR---ALPRLDEDNRL 259
Query: 240 TPIVEALSMSYLGPDYSQTKEFGE-----ISIKDLDQLARSSFPLCMRHLFDKLREDHHL 294
PI+E LS ++ D S ++ G I+ +D L+ + FPLCMR+L +LR++ HL
Sbjct: 260 IPILEHLSKNFGTSDTSYSEGEGAVPGAPITAASIDVLS-NHFPLCMRNLHMQLRKNAHL 318
Query: 295 KHGGRMQLGLFLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTD- 353
KH GR+Q LFLKG+GL +ED + FW+ F E F+ +Y Y+IRH YG G +
Sbjct: 319 KHFGRLQYTLFLKGIGLSLEDCILFWRQSFRNFTDDE-FNSKYKYNIRHAYGDVGGDANR 377
Query: 354 ----YTPYSCQKIIS-STPGVGDHHGCPYRHFSEENLRAALGRMGVGSR-AMEDVVDKVR 407
Y PYSCQKI++ + PG G HGCPYRHFS +NL A L GV R + V + V
Sbjct: 378 RGRGYPPYSCQKILTDNAPGAGQTHGCPYRHFSVDNLIALLQATGVNDRETLHGVREDVG 437
Query: 408 NRHYQLACTLTFEAVHS------------SSCDAG-INHPNQYFSDSH 442
Y +AC FE VH SS D I HPN +F S+
Sbjct: 438 RMRYHIACNRVFEYVHKDELRKVKDEGIMSSTDLDTIVHPNTFFKRSY 485
>gi|346318419|gb|EGX88022.1| DNA primase, large subunit [Cordyceps militaris CM01]
Length = 506
Score = 272 bits (695), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 171/458 (37%), Positives = 236/458 (51%), Gaps = 40/458 (8%)
Query: 21 LPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEEMENLVRDLWKANMRHPE 80
L Y P ++ LE FE +A+DRLRVL + R K P E ++ + + +
Sbjct: 38 LNFYADPPTADITLEQFEQWAIDRLRVLAELEACSFRNKSPAETALHMKPILEKYLPLDS 97
Query: 81 ASE-------DVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKRALM 133
S KD SHF+LRL + T+DLR+ F +ETAL+R RF + A +
Sbjct: 98 NSSLSTRLAAQRQKDHYSHFILRLAFSSTDDLRRRFARVETALFRIRFATDDLADRAAFV 157
Query: 134 EEFDL----PCKAISRTEFENAKEKLEQVARSFDQPLPTADAIFYKVPFEEVPELVAGRR 189
+ L P R + + A D +++V +E VPELV RR
Sbjct: 158 ADLALDWWHPVSDDERRLYAAELAAMTSTAAGRKTGAAAEDEGWFRVDWERVPELVESRR 217
Query: 190 VYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEALSMS 249
V++ G A+V + + S+VV +F + L K L LT R + R E DRLTPI+ LS +
Sbjct: 218 VFLKAGKAFVPVREQASMVVAEFSTRLEKQLTLTAR---ALPRLDEDDRLTPILNHLSKN 274
Query: 250 YLGPDY-----SQTKEFGEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGL 304
++ PD S + IS +D LA FP CM HL LR D HLKH GR+Q L
Sbjct: 275 FITPDAAYMSGSGAPDGATISAARIDGLAAQHFPACMAHLHRSLRRDAHLKHYGRLQYTL 334
Query: 305 FLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTD-----YTPYSC 359
FLKG+GL +E+ALAFW+A F KV + F+KEY Y++RH YG G ++ Y+P+ C
Sbjct: 335 FLKGIGLSLEEALAFWRAGF-HKVTDDTFNKEYRYNVRHAYGDVGGDSNRRGGGYSPFGC 393
Query: 360 QKIISS-TPGVGDHHGCPYRHFSEENLRAALGRMGVGSRA-MEDVVDKVRNRHYQLACTL 417
QKI++ PG GD HGCPYRHF +NL A + MGV RA ++ V + + Y +AC
Sbjct: 394 QKILTEHPPGAGDAHGCPYRHFDADNLTALVQAMGVADRAVLQGVKEDKDTQKYHMACNR 453
Query: 418 TFEAVHSSSC----DAGIN---------HPNQYFSDSH 442
FE +H D GI HPN+YF S+
Sbjct: 454 VFEHLHKQEIKKAKDEGIMTSNQLETIVHPNEYFKRSY 491
>gi|406868041|gb|EKD21078.1| DNA primase large subunit [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 504
Score = 271 bits (694), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 170/456 (37%), Positives = 248/456 (54%), Gaps = 43/456 (9%)
Query: 21 LPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEEMENLVRDLWKANMRHPE 80
L Y P ++ LE FE +A+DRLR+L + R K P E ++ L + P
Sbjct: 37 LNFYVTPPTADITLEQFEQWAIDRLRILAELEACSFRNKSPTETATHMKPLLDKYL--PL 94
Query: 81 ASE---------DVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKRA 131
A+ + KD SHF+LRL + TEDLR+ F +E+ L+R RF ++
Sbjct: 95 ATSTSGSMAIQSERQKDHYSHFILRLAFASTEDLRRRFSRVESMLFRLRFQADDLRERQL 154
Query: 132 LMEEFDLPCKAISRTEFENAKEKLEQVARSFDQPLPTADAIFYKVPFEEVPELVAGRRVY 191
+E +L + +S E E+L + P + ++KV +E VPELV RRV+
Sbjct: 155 FVESLNLDWETVSDDERREYAEELRAAGGGY--PKRIEEESYFKVDWERVPELVEHRRVF 212
Query: 192 IHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEALSMSYL 251
+ G AYV + +S+VV +F + L KAL +T+R + R E DRLTPI+ LS ++
Sbjct: 213 VKGGKAYVPGKEQLSMVVAEFTTRLEKALEMTSR---ALPRLDEDDRLTPILAHLSQNFT 269
Query: 252 GPD--YSQTKEF---GEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFL 306
PD YS + +IS +++D L+ SSFPLCM++L LR D HLKH GR+Q LFL
Sbjct: 270 TPDANYSSSATALPGADISARNIDTLS-SSFPLCMQNLHRSLRRDAHLKHYGRLQYTLFL 328
Query: 307 KGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTD-----YTPYSCQK 361
KG+GL +E+ L FW++ FS K+ + F+KEY Y++RH YG G ++ Y+P+SCQK
Sbjct: 329 KGIGLNLEECLVFWRSSFS-KITDDVFNKEYRYNVRHAYGDVGGDSNRRGNGYSPFSCQK 387
Query: 362 IISS-TPGVGDHHGCPYRHFSEENLRAALGRMGVGSR-AMEDVVDKVRNRHYQLACTLTF 419
I++ PG G+ HGCPYRHFS +NL L +G+ + + V + Y LAC F
Sbjct: 388 ILTEHPPGPGEAHGCPYRHFSVDNLTGLLQAVGIKDQEVLRGVKEDKEKMKYHLACNRVF 447
Query: 420 EAVHSSSC----DAG---------INHPNQYFSDSH 442
+ VH D G + HPN+YF S+
Sbjct: 448 DYVHKQEIKRVKDDGTWTTSQLETLVHPNEYFKRSY 483
>gi|413916163|gb|AFW56095.1| hypothetical protein ZEAMMB73_117262 [Zea mays]
gi|413916164|gb|AFW56096.1| hypothetical protein ZEAMMB73_117262 [Zea mays]
Length = 209
Score = 271 bits (694), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 136/208 (65%), Positives = 162/208 (77%), Gaps = 5/208 (2%)
Query: 1 MEIVRSQRS----RTNTPNDSVSTLPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALA 56
MEIVRSQR + LP Y+ APQLEVRLE+FE+FA+DRLRVLKGISD L+
Sbjct: 1 MEIVRSQRQVAAAASGGGGGGAGALPTYKAAPQLEVRLEEFELFAIDRLRVLKGISDGLS 60
Query: 57 RGKRPEEMENLVRDLWKANMRHPEASEDVNKDIISHFVLRLVYCRTEDLRKWFLSMETAL 116
RGKRPEEME LV +LWK +MRH + +E++NKDIISHFVLRLVYCRTE+LRKWFLSMET L
Sbjct: 61 RGKRPEEMEKLVSELWKTHMRHQDPAENLNKDIISHFVLRLVYCRTEELRKWFLSMETTL 120
Query: 117 YRYRFLLGSSEAKRALMEEFDLPCKAISRTEFENAKEKLEQVARSFDQPLPTADAIFYKV 176
+RYRF L S E +R LM EF LP KA+ +EFE K+KL QVARS Q + + +F+KV
Sbjct: 121 FRYRFRLESPETQRMLMTEFQLPYKALPYSEFEAVKDKLSQVARSIGQS-ASVEHVFFKV 179
Query: 177 PFEEVPELVAGRRVYIHKGHAYVAMHQV 204
PFEEVP+LVAGRRV++ KG+AYVAM QV
Sbjct: 180 PFEEVPDLVAGRRVFLSKGYAYVAMSQV 207
>gi|260949825|ref|XP_002619209.1| hypothetical protein CLUG_00368 [Clavispora lusitaniae ATCC 42720]
gi|238846781|gb|EEQ36245.1| hypothetical protein CLUG_00368 [Clavispora lusitaniae ATCC 42720]
Length = 488
Score = 271 bits (693), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 175/455 (38%), Positives = 246/455 (54%), Gaps = 41/455 (9%)
Query: 19 STLPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEEMENLVRDLWKANMRH 78
S L Y P E+ LE FE +A+DRLRVL I LARGK +ME +VR L ++
Sbjct: 39 SRLSFYDTPPLQEITLEQFETWAIDRLRVLIEIESCLARGKSVRDMEGIVRPLLLKHL-- 96
Query: 79 PEASEDVN---KDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRF-LLGSSEAKRALME 134
S DV+ KD SH+ LRLV+CRT++LR+ F+ ETAL+R R+ +L E +
Sbjct: 97 --PSSDVDERRKDHYSHYTLRLVFCRTDELRRRFVRAETALFRLRYNMLQPKEQHEFVRL 154
Query: 135 EFD-LPCKAISRTEFENAKEKLEQ---------VARSFDQPLPTADAI--------FYKV 176
D L + IS E E L +A S + PL +A+ + + ++
Sbjct: 155 NADKLHWEYISAEEKSALAEALYSASGAAVRALLADSGEPPL-SAEHLRAHMRAESYIRL 213
Query: 177 PFEEVPELVAGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQER 236
PFE+V LVA R VY+ +G AYV SL+ +F S+LS AL+ T + + R +E
Sbjct: 214 PFEKVGALVASRSVYVSRGRAYVPAALQSSLLAAEFSSSLSNALMKT---FQALPRLEED 270
Query: 237 DRLTPIVEALSMSYLGPDYSQTKEFG----EISIKDLDQLARSSFPLCMRHLFDKLREDH 292
DR+ P++ LS S+ Y T+ G +++ D+ Q +PLC HL L
Sbjct: 271 DRVLPLLSNLSRSFASVQYDATETEGLSAAQVTSPDVTQ----HYPLCASHLQSTLVAQS 326
Query: 293 HLKHGGRMQLGLFLKGVGLRMEDALAFWKAEFSQK--VGAERFDKEYAYSIRHNYGKEGK 350
HLK+ GR QLGLFLKG GL +++AL FW +F++ + + F+KEY Y+IRH YG EG
Sbjct: 327 HLKYIGRQQLGLFLKGAGLGVDEALRFWAGQFTKSGTINQDTFNKEYRYNIRHMYGLEGG 386
Query: 351 RTDYTPYSCQKIISS-TPGVGDHHGCPYRHFSEENLRAALGRMGVGSRAMEDVVDKVRNR 409
R +Y P+ C I+S P G+ HGCPYR FS + L + MGV ++ V+D V
Sbjct: 387 RINYKPWDCNTILSKPKPSRGEAHGCPYRDFSPDALAERVASMGVAQHDVQGVLDHVARH 446
Query: 410 HYQLACTLTFEAVHSSSCDAGINHPNQYFSDSHKI 444
Y +ACT FE H + I HPN YF S ++
Sbjct: 447 EYTVACTRVFELTHKVDENLHITHPNLYFDRSRQL 481
>gi|396468487|ref|XP_003838185.1| similar to DNA primase large subunit [Leptosphaeria maculans JN3]
gi|312214752|emb|CBX94706.1| similar to DNA primase large subunit [Leptosphaeria maculans JN3]
Length = 527
Score = 271 bits (693), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 171/466 (36%), Positives = 247/466 (53%), Gaps = 42/466 (9%)
Query: 21 LPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEEMENLVRDLWKANM---- 76
L Y P E+ LE+FE +A+ RL+VL + R + PEE +R + ++
Sbjct: 61 LNFYTLPPTAEITLEEFETWAIQRLKVLSELEACSFRNRSPEETAEYMRSILDKHLPLRS 120
Query: 77 ---RHPEASEDVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKRALM 133
R + E+ KD SHF+LRL + TEDLR+ F +ET L+R RF ++ +
Sbjct: 121 NSSRSQKIQEERRKDHYSHFILRLAFASTEDLRRRFSRLETMLFRLRFKDDDIRERQEFV 180
Query: 134 EEFDLPCKAISRTEFENAKEKLEQVARSFDQPLPTADAIFYKVPFEEVPELVAGRRVYIH 193
+ +L + + E K +L++ + +Q + ++KV +E VPELV R+V I
Sbjct: 181 KSLNLEWEEVGDEE----KRELKKELMAANQQPKGEEQEWFKVDWERVPELVEQRKVLIR 236
Query: 194 KGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEALSMSYLGP 253
+G AYV + +SLVV +F L +AL LT R + R E DRL PI+ LS S+ P
Sbjct: 237 RGKAYVPQREQMSLVVAEFTKRLDEALELTAR---ALPRLDEDDRLAPILAHLSQSFTAP 293
Query: 254 D--YSQTKE----FGEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLK 307
D YS I+ +D L+++ FPLCMR+L LRE+ HLKH GR+Q LFLK
Sbjct: 294 DTAYSSADANIDGLSTITANSIDSLSQN-FPLCMRNLHTTLRENSHLKHFGRLQYTLFLK 352
Query: 308 GVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTD-----YTPYSCQKI 362
G+GL +++ L FW+ F + + ++F KEY Y+IRH YG G ++ YTP+SCQK+
Sbjct: 353 GIGLSLDECLVFWRRSF-KLITDDKFQKEYKYNIRHAYGDVGGDSNRRGRGYTPFSCQKL 411
Query: 363 ISS-TPGVGDHHGCPYRHFSEENLRAALGRMGVGSR-AMEDVVDKVRNRHYQLACTLTFE 420
++ PG G HGCPYR F+ ENL + L R+GV R ++ V + V + Y +AC FE
Sbjct: 412 LTEPLPGPGQSHGCPYRTFTSENLISILQRVGVNDRDVLKTVKEDVSKQRYHVACNRIFE 471
Query: 421 AVHSSSC----DAG---------INHPNQYFSDSHKILQPKNNNAA 453
H D G I HPN YF S + NA
Sbjct: 472 WSHRREIKKVRDDGSWSATDLDTIVHPNTYFKRSWLLKHLGEGNAG 517
>gi|154280274|ref|XP_001540950.1| DNA primase large subunit [Ajellomyces capsulatus NAm1]
gi|150412893|gb|EDN08280.1| DNA primase large subunit [Ajellomyces capsulatus NAm1]
Length = 536
Score = 271 bits (692), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 174/458 (37%), Positives = 244/458 (53%), Gaps = 44/458 (9%)
Query: 21 LPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEEMENLVRDLWKANM---R 77
L Y P E+ LE FE +A+DRLR+L + R K P E + + L +
Sbjct: 70 LNFYEIPPTQEITLEQFEQWAIDRLRILAELEACSYRNKTPAETASHITPLLNKFLPLSA 129
Query: 78 HPEASEDVN--------KDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAK 129
+ +S V+ KD SHF+LRL + TEDLR+ F +ET L+++RF L S+ +
Sbjct: 130 NTSSSTGVDQRLRNERQKDHYSHFILRLAFSSTEDLRRRFTRLETMLFKFRFQLDDSKER 189
Query: 130 RALMEEFDLPCKAISRTEFENAKEKLEQVARSFDQPLPTADAIFYKVPFEEVPELVAGRR 189
RA +E + +S E E L + D ++KV +E+VPELV R
Sbjct: 190 RAFIESLNFNWDMVSDEEKHELGESLLASTYGVRR---LEDESWFKVDWEKVPELVERRG 246
Query: 190 VYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEALSMS 249
V++ KG AYV + + +S+V+ +F + L KAL T+R + R E DRLTPI+E LS +
Sbjct: 247 VFVRKGKAYVPVREQLSMVLAEFTARLEKALEFTSR---ALPRLDEDDRLTPILEHLSKN 303
Query: 250 YLGPDYSQTKEFGE-----ISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGL 304
+ D S + G I+ +D L++ FPLCMR+L +LR++ HLKH GR+Q L
Sbjct: 304 FGTSDSSYAEGEGSVPGAPITAASIDSLSQH-FPLCMRNLHMQLRKNSHLKHFGRLQYTL 362
Query: 305 FLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTD-----YTPYSC 359
FLKG+GL +EDAL FW+ F E F+ +Y Y++RH YG G + Y PYSC
Sbjct: 363 FLKGIGLSLEDALVFWRESFKIFTDDE-FNSKYKYNVRHAYGDVGGDANRRGRGYPPYSC 421
Query: 360 QKIIS-STPGVGDHHGCPYRHFSEENLRAALGRMGVGSR-AMEDVVDKVRNRHYQLACTL 417
QKI++ ++PG G HGCPYRHFS ENL L GV + + V + V Y +AC
Sbjct: 422 QKILTDNSPGAGQTHGCPYRHFSVENLINLLQATGVNDQEVLRGVREDVGKTRYHIACNR 481
Query: 418 TFEAVHSSSC----DAG---------INHPNQYFSDSH 442
FE VH + D G I HPN YF S+
Sbjct: 482 VFEWVHKAELKKVRDEGSWSQTDLDTIVHPNTYFKRSY 519
>gi|320588693|gb|EFX01161.1| DNA primase large subunit [Grosmannia clavigera kw1407]
Length = 509
Score = 271 bits (692), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 170/459 (37%), Positives = 248/459 (54%), Gaps = 41/459 (8%)
Query: 21 LPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEEMENLVRDLWKANM---- 76
L Y +P ++ LE FE +A+DRL VL + R + E ++ + + M
Sbjct: 38 LNFYTDSPTSDITLEQFEQWAIDRLHVLAELEACSFRNRSSAETALHMKSIMEKYMPLEA 97
Query: 77 ---RHPEASEDVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKRALM 133
+ + KD SHF+LRL + TEDLR+ F+ +ET L+R RF + + +
Sbjct: 98 NSSSSTKLAAQRKKDHYSHFILRLAFASTEDLRRRFVRVETMLFRLRFGDDDTRERATFI 157
Query: 134 EEFDLPCKAISRTEFENAKEKLEQV-ARSF----DQPLPTADAIFYKVPFEEVPELVAGR 188
+L + +S E + +L V A SF Q + + KV + VPELV GR
Sbjct: 158 RGLNLDWEMVSDEEKSSLATELAAVSASSFGGQRKQQAVIEEESWCKVDWMRVPELVEGR 217
Query: 189 RVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEALSM 248
RV++ G AYV + S+V T+F L +AL LT R + R E DRLTPI++ LS
Sbjct: 218 RVFLKAGKAYVPSKEQASMVATEFSGRLERALELTAR---ALPRLDEDDRLTPILDHLSK 274
Query: 249 SYLGPDYSQTKEFG-----EISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLG 303
+++ PD S + G EI+ + +D LA + FPLCM++L LR D HLKH GR+Q
Sbjct: 275 NFVTPDASFSGADGNNSGAEINARSIDTLAPAHFPLCMQNLHRSLRRDAHLKHYGRLQYT 334
Query: 304 LFLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTD-----YTPYS 358
LFLKG+GL +E++L FW+ F K+ + F+KEY Y++RH YG+ G + Y+P+S
Sbjct: 335 LFLKGIGLNLEESLLFWRQGF-HKITDDTFNKEYRYNVRHAYGEVGGDMNRRGGGYSPFS 393
Query: 359 CQKIISS-TPGVGDHHGCPYRHFSEENLRAALGRMGVGSRAMEDVVDKVRNRH-YQLACT 416
CQKI++ TPG GD HGCPYRHFS ENL L +G+ RA+ V + +++ + +AC
Sbjct: 394 CQKILTEHTPGTGDAHGCPYRHFSMENLTTFLQGVGINDRAVLQGVKEDKDKQKFHMACN 453
Query: 417 LTFEAVHSSSCDAG-------------INHPNQYFSDSH 442
FE VH + I HPN+YF S+
Sbjct: 454 RVFEHVHKNELRRAKDESVMTAAQLETIVHPNEYFKRSY 492
>gi|403173834|ref|XP_003332871.2| hypothetical protein PGTG_14030 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375170717|gb|EFP88452.2| hypothetical protein PGTG_14030 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 479
Score = 270 bits (691), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 160/435 (36%), Positives = 245/435 (56%), Gaps = 33/435 (7%)
Query: 21 LPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEEMENLVRDLWKANMRHPE 80
L Y P EV +E+FE +A+DRL KG DAL + E L L +
Sbjct: 49 LNFYDKPPDSEVTIEEFETWAIDRL---KGHFDALKTTLNVKSKEFL--PLNAKTAQSVN 103
Query: 81 ASEDVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKRALMEEFDLPC 140
++ KD SHF+LRL +CR+E+LR F++ ET L+RYR + + + +L
Sbjct: 104 LDQERKKDHYSHFILRLAFCRSEELRNRFVNAETQLFRYRLETDDTSERADFVGSLNLDW 163
Query: 141 KAISRTEFENAKEKLEQVARSFDQPLPTADAIFYKVPFEEVPELVAGRRVYIHKGHAYVA 200
K S E A+ + + F + + +YKV + +VP+LVA RRVY+ G+A+VA
Sbjct: 164 KEASPEETMEARRAFIKDKKHFGE-----EGSYYKVRWLKVPDLVAARRVYLSGGYAFVA 218
Query: 201 MHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEALSMSYL----GPDYS 256
S+++ +F S L +AL +T++ E RL P++E LS+S+L G D+
Sbjct: 219 SKDQSSIIIQEFSSKLLQALEITSKHLPYM---DEDSRLLPVLEHLSISFLAGISGSDFV 275
Query: 257 QTK---EFGEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRM 313
T + GE++ +D LA+ FP CM++L+ LR+D HLK+GGR QL LFLKG+GL +
Sbjct: 276 STSLNPDGGELTASMIDDLAKQHFPPCMKNLWILLRKDKHLKYGGRQQLNLFLKGIGLPI 335
Query: 314 EDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQKIISSTPGVGDHH 373
E+A+ FW+ FS + ++F K+Y Y++RHNYG EG RT+Y P SC II+ + G + H
Sbjct: 336 EEAVIFWRQAFSN-ISDDKFRKDYRYAVRHNYGLEGSRTNYQPKSCVTIITGSVGPLESH 394
Query: 374 GCPYRHFSEENLRAALGRM---GVGSRAMEDVVDKVRNRHYQLACTLTFEAVHSS----- 425
GCP++HFS+ NL L ++ + S M+D+++ +N HY LACT +E H +
Sbjct: 395 GCPFKHFSQLNLTQHLNQLYQIDLKSDLMKDIIEFKKNDHYHLACTAVWEHQHKALGVKK 454
Query: 426 ----SCDAGINHPNQ 436
++HPN+
Sbjct: 455 GDGLGQGESVSHPNR 469
>gi|409082388|gb|EKM82746.1| hypothetical protein AGABI1DRAFT_53177 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 486
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 166/467 (35%), Positives = 258/467 (55%), Gaps = 42/467 (8%)
Query: 18 VSTLPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEEMENLVRDLWKANMR 77
+ L Y + P +V +++FE A+DRLRVL I +LAR + EE++ + + M+
Sbjct: 29 ANALNFYDHPPLFDVTVDEFETTAIDRLRVLAEIESSLARNRTWEELKAIT---YAQYMK 85
Query: 78 H--------PEASEDVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAK 129
+ +A E+ KD + H+VLRL +CR+EDLR+ F+ E+ L+R RF E +
Sbjct: 86 YVPLHTSTFTDAVEERRKDHLGHYVLRLAFCRSEDLRRRFVKAESVLFRVRFEQTEIELR 145
Query: 130 RALMEEFDLPCKAISRTEFENAKEKLEQVARSFDQPLPTADAI----FYKVPFEEVPELV 185
+ + + A+++ E ++L + +S Q ADA F KV + VP+LV
Sbjct: 146 KEFLNSRNFNWIAVTQEEKAQYHQELYSMYQSPKQE-NRADAFKKEKFSKVRWTRVPDLV 204
Query: 186 AGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEA 245
RRV++ G AYV + S++ +F L KAL T+R R E RL P+++
Sbjct: 205 EARRVFLKSGWAYVPGREQSSIIFQEFEVQLEKALEATSRL---IPRLDEDSRLIPVLDN 261
Query: 246 LSMSYLGPDYSQ------TKEFGEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGR 299
LS ++ S+ + +I + +D LA+ FP+CMR + + LR DHHLKH GR
Sbjct: 262 LSQGFVAGIASEWMNAAGSSSSSDIRAEMVDGLAKKHFPMCMRGMHENLRRDHHLKHFGR 321
Query: 300 MQLGLFLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSC 359
+Q GLFLK +GL +E+A+AFW+ F ++ ++F KEY Y+IRH+YG EGKR +Y +C
Sbjct: 322 LQYGLFLKVLGLSIEEAVAFWRKSFD-RMTDDKFSKEYKYNIRHSYGLEGKRANYPAKNC 380
Query: 360 QKIISSTPGVGDHHGCPYRHFSEENLRAALGRM----GVGSRAMEDVVDKVRNRHYQLAC 415
+I++S+P GCPYR FS ENL+ AL M G+ S + +++ V+ HY +AC
Sbjct: 381 LQILTSSPS---DVGCPYRTFSPENLQTALLSMYSQEGLKSSDLPEIMSTVKAGHYHVAC 437
Query: 416 TLTFEAVHSSSCDA---------GINHPNQYFSDSHKILQPKNNNAA 453
T FE H+S A + HPNQY + S ++ + K + A
Sbjct: 438 TRVFEITHASCGVAKGEGIGGGESVTHPNQYAARSMELGKSKKEDDA 484
>gi|426200222|gb|EKV50146.1| hypothetical protein AGABI2DRAFT_216528 [Agaricus bisporus var.
bisporus H97]
Length = 486
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 167/464 (35%), Positives = 256/464 (55%), Gaps = 36/464 (7%)
Query: 18 VSTLPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEEMENLVRDLW-KANM 76
+ L Y + P +V +++FE A+DRLRVL I +LAR + EE++ + + K
Sbjct: 29 ANALNFYDHPPLFDVTVDEFETTAIDRLRVLAEIESSLARNRTWEELKAITYTQYMKYVP 88
Query: 77 RHPEASEDVN----KDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKRAL 132
H DV KD + H+VLRL +CR+EDLR+ F+ E+ L+R RF E ++
Sbjct: 89 LHTSTFTDVEEERRKDHLGHYVLRLAFCRSEDLRRRFVKAESVLFRVRFEQTEMELRKEF 148
Query: 133 MEEFDLPCKAISRTEFENAKEKLEQVARSFDQPLPTADAI----FYKVPFEEVPELVAGR 188
+ + A+++ E ++L + +S Q ADA F KV + VP+LV R
Sbjct: 149 LNSRNFNWIAVTQEEKAQYHQELYSMYQSPKQE-NRADAFKKEKFSKVRWTRVPDLVEAR 207
Query: 189 RVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEALSM 248
RV++ G AYV + S++ +F L KAL T+R R E RL P+++ LS
Sbjct: 208 RVFLKSGWAYVPGREQSSIIFQEFEVQLEKALEATSRL---IPRLDEDSRLIPVLDNLSQ 264
Query: 249 SYLGPDYSQ------TKEFGEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQL 302
++ S+ + +I + +D LA+ FP+CMR + + LR DHHLKH GR+Q
Sbjct: 265 GFVAGIASEWMNAAGSSSSSDIRAEMVDGLAKKHFPMCMRGMHENLRRDHHLKHFGRLQY 324
Query: 303 GLFLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQKI 362
GLFLK +GL +E+A+AFW+ F ++ ++F+KEY Y+IRH+YG EGKR +Y +C +I
Sbjct: 325 GLFLKVLGLSIEEAVAFWRKSFD-RMTDDKFNKEYKYNIRHSYGLEGKRANYPAKNCLQI 383
Query: 363 ISSTPGVGDHHGCPYRHFSEENLRAALGRM----GVGSRAMEDVVDKVRNRHYQLACTLT 418
++S+P GCPYR FS ENL+ AL M G+ S + +++ V+ HY +ACT
Sbjct: 384 LTSSPS---DVGCPYRTFSPENLQTALLSMYSQEGLKSSDLPEIMSTVKAGHYHVACTRV 440
Query: 419 FEAVHSSSCDA---------GINHPNQYFSDSHKILQPKNNNAA 453
FE H+S A + HPNQY + S ++ + K + A
Sbjct: 441 FEITHASCGVAKGEGIGGGESVTHPNQYAARSMELGKSKKEDDA 484
>gi|299753581|ref|XP_001833365.2| DNA primase large subunit Spp2 [Coprinopsis cinerea okayama7#130]
gi|298410365|gb|EAU88470.2| DNA primase large subunit Spp2 [Coprinopsis cinerea okayama7#130]
Length = 495
Score = 270 bits (689), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 168/467 (35%), Positives = 254/467 (54%), Gaps = 44/467 (9%)
Query: 21 LPL--YRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEEMENLVRDL------W 72
LPL Y P +V +E+FE A+DRLR+L I + AR + +E+ ++R
Sbjct: 32 LPLNFYDKPPLFDVTIEEFETCALDRLRILAEIESSAARNRTWDELTKVIRAQCEKYMPL 91
Query: 73 KANMRHPEASEDVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKRAL 132
K N + E +D +SHFVLRL +CR+EDLR+ ++ ET L++ R+ + + A
Sbjct: 92 KDNSSTTDRDEQRRRDHLSHFVLRLAFCRSEDLRRRYVKAETQLFKIRYEDSALADREAF 151
Query: 133 MEEFDLPCKAISRTEFENAKEKLEQVARSFDQPLPTADA-------IFYKVPFEEVPELV 185
+ D +S E +++L + + P P A+ + KV + VP+LV
Sbjct: 152 LNSRDFNYIPVSAEEKNKYRDQLYSL---YFLPRPEAEKRAAFDREKYVKVRWSRVPDLV 208
Query: 186 AGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEA 245
RRV++H G AYV + S+V +F S L K L +T R R E DRL PI+E
Sbjct: 209 EKRRVFLHGGWAYVPSQEQASIVYQEFESRLEKVLEMTARLLP---RLDEDDRLIPILEN 265
Query: 246 LSMSYL-GPDYSQTKEFG------EISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGG 298
L+ +L G E G E+ + +D LA+ FPLCM+ L DKLR D+HLKH G
Sbjct: 266 LAQGFLTGVPSEWMGENGVQGSGEELKAEMIDDLAKKHFPLCMKTLHDKLRRDNHLKHFG 325
Query: 299 RMQLGLFLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTDYTPYS 358
R+Q GLFLK +GL +E+A+AFW+ FS ++ ++F+KEY Y+IRH+YG EGKR +Y +
Sbjct: 326 RLQYGLFLKVLGLSVEEAVAFWRKSFS-RITDDKFNKEYRYNIRHSYGLEGKRANYPAKN 384
Query: 359 CQKIISSTPGVGDHHGCPYRHFSEENLRAAL----GRMGVGSRAMEDVVDKVRNRHYQLA 414
C +I++ PG + GCPYR ++ ENL++ L +G+ + +++V V HY +A
Sbjct: 385 CLQILA--PGNTNDCGCPYRTYTSENLQSTLLSAYAPLGLKASDLQEVKATVDGGHYHVA 442
Query: 415 CTLTFEAVHSS---------SCDAGINHPNQYFSDSHKILQPKNNNA 452
CT FE H+ + HPNQY S S ++ + +A
Sbjct: 443 CTRVFEITHAQYGIKKGEGVGGGESVTHPNQYASRSRELRKATEGDA 489
>gi|367010986|ref|XP_003679994.1| hypothetical protein TDEL_0B06540 [Torulaspora delbrueckii]
gi|359747652|emb|CCE90783.1| hypothetical protein TDEL_0B06540 [Torulaspora delbrueckii]
Length = 500
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 162/451 (35%), Positives = 243/451 (53%), Gaps = 28/451 (6%)
Query: 19 STLPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEEMENLVR-DLWKANMR 77
S L Y PQ E+ L+ FE++A+DRL++L I ++R K +E+E +++ L K
Sbjct: 44 SKLSFYELPPQGEITLDQFEIWAIDRLKILLEIESCVSRNKTMKEIEVIIKPHLAKLMPF 103
Query: 78 HPEASEDVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKRALMEEFD 137
+ + ED KD SHF+LRL +CR+ +LR+ F+ ET L++ RF + +S + ++ +
Sbjct: 104 NTDKFEDRKKDYYSHFILRLCFCRSNELREKFVRAETLLFKIRFNMLTSNDQTKFVQSLN 163
Query: 138 LPC-KAISRTEFENAKEKLEQVARSFDQ-PLPTADA----------IFYKVPFEEVPELV 185
LP + IS E + ++L Q S Q L +D F K+PFE V ELV
Sbjct: 164 LPSLQFISDEEKRDLSQQLYQTISSQLQFQLNLSDENQRQSYFKQEKFIKLPFENVIELV 223
Query: 186 AGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEA 245
R+V++ G+AY+ Q ++L+ +F + L+ L T R E DRL PI+
Sbjct: 224 GTRQVFLKGGYAYLPQFQQLNLISGEFSTRLAHELGTTYRNLPHL---NEDDRLMPILHH 280
Query: 246 LSMSYLGPDYSQ---TKEFGEISIKDLDQLARS-SFPLCMRHLFDKLREDHHLKHGGRMQ 301
LS Y D+ Q K+ G+I+ K + S ++PLC ++L L+ HHL++ GR Q
Sbjct: 281 LSSGYTISDFEQGEFDKQDGDINAKTVYSTEISQNYPLCAKNLLKGLKSSHHLRYNGRQQ 340
Query: 302 LGLFLKGVGLRMEDALAFWKAEFSQKVG---AERFDKEYAYSIRHNYGKEGKRTDYTPYS 358
L FLKG+GL ++A+ FW F+ G ++F+KEY YS RHNYG EG R +Y P+
Sbjct: 341 LSFFLKGIGLSADEAMKFWTDAFTSNGGHLSVDKFNKEYRYSFRHNYGLEGTRINYKPWD 400
Query: 359 CQKIISST-PGVGDHHGCPYRHFSEENLRAALGRMGVGSRAMEDVVDKVRNRHYQLACTL 417
C+ I+S P G+ HGCPYR ++ E L L M + + V+D Y +ACT
Sbjct: 401 CRTILSKPRPARGEFHGCPYRDWNAETLSLELNAMKLTKTQVTSVLDSCHRTEYTVACTQ 460
Query: 418 TFEAVHSSSCDAG----INHPNQYFSDSHKI 444
FE H SS I HPN YF S ++
Sbjct: 461 VFEYTHGSSRKVDDQTHITHPNLYFERSRQL 491
>gi|190347701|gb|EDK40026.2| hypothetical protein PGUG_04124 [Meyerozyma guilliermondii ATCC
6260]
Length = 492
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 166/480 (34%), Positives = 248/480 (51%), Gaps = 46/480 (9%)
Query: 10 RTNTPNDSVSTLPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEEMENLVR 69
R + PN +S Y P E+ LE FE +A+DRL++L I +ARG+ E E VR
Sbjct: 22 RNDLPNHRLS---FYDVPPTEEITLEQFESWAIDRLKILIEIESCMARGRSFRETETAVR 78
Query: 70 DL---------WKANMRHPEASEDVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYR 120
L W N + +++ KD SHF+LRLV+CRTEDLR+ F+ ET L++ R
Sbjct: 79 PLLQKLLPLGTWPVN--NNSQIDELKKDYYSHFILRLVFCRTEDLRRKFVRNETVLFKIR 136
Query: 121 F-LLGSSEAKRALMEEFD-LPCKAISRTE--------FENAKEKLEQVARSFDQPLPTAD 170
+ + E + + D LP I E F ++ + T D
Sbjct: 137 YNAMQPKEQHQFITNHHDKLPWNYIDSDEKSALFDQLFAATGATVKSALAAESDGQITTD 196
Query: 171 AI--------FYKVPFEEVPELVAGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALIL 222
+ F KVPFE++ LVA R V + G+ YV +SL+ ++F+ L + L+
Sbjct: 197 QLRAHFRNENFIKVPFEKITSLVATRSVLLKSGYGYVPSTLQLSLLASEFQELLQRDLL- 255
Query: 223 TNRKWTSTIREQERDRLTPIVEALSMSYLGPDYSQTKEFGEISIKDLDQLARSS------ 276
R + S R +E DRL P++ L ++ +Y + D++ + ++
Sbjct: 256 --RTFQSIPRLEEDDRLLPLLNHLGQNFASMEYDPAFSADPSLVSDINAASVTTPAITNH 313
Query: 277 FPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWKAEFS---QKVGAERF 333
+PLC +HL + HL+H GR QL LFLKG+GL +++AL FW F+ + ERF
Sbjct: 314 YPLCAKHLQTNMIASSHLRHEGRQQLSLFLKGIGLSVDEALKFWSHSFTSGPHAMTPERF 373
Query: 334 DKEYAYSIRHNYGKEGKRTDYTPYSCQKIIS-STPGVGDHHGCPYRHFSEENLRAALGRM 392
+KE+ Y+IRH YG EG RT+Y P+ C +I+S PG ++HGCPYR S + L LG M
Sbjct: 374 NKEFKYNIRHTYGLEGARTNYKPWDCARILSRPLPGKNEYHGCPYRDLSVDALTTQLGEM 433
Query: 393 GVGSRAMEDVVDKVRNRHYQLACTLTFEAVHSSSCDAGINHPNQYFSDSHKILQPKNNNA 452
GVG+ M+ V++ V + Y +ACT FE H+ + I HPN YF S ++ + K A
Sbjct: 434 GVGAVDMKGVLNDVERKDYTVACTRVFEITHNVQAEH-IGHPNLYFDRSRQLERAKTETA 492
>gi|325092910|gb|EGC46220.1| conserved hypothetical protein [Ajellomyces capsulatus H88]
Length = 1485
Score = 269 bits (687), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 172/458 (37%), Positives = 244/458 (53%), Gaps = 44/458 (9%)
Query: 21 LPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEEMENLVRDLWKANM---R 77
L Y P E+ LE FE +A+DRLR+L + R K P E + + L +
Sbjct: 38 LNFYEIPPTQEITLEQFEQWAIDRLRILAELEACSYRNKTPAETASHITPLLNKFLPLSA 97
Query: 78 HPEASEDVN--------KDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAK 129
+ +S V+ KD SHF+LRL + TEDLR+ F +ET L+++RF L S+ +
Sbjct: 98 NTSSSTGVDQRLRNERQKDHYSHFILRLAFSSTEDLRRRFTRLETMLFKFRFQLDDSKER 157
Query: 130 RALMEEFDLPCKAISRTEFENAKEKLEQVARSFDQPLPTADAIFYKVPFEEVPELVAGRR 189
RA +E + +S E E L + D ++KV +E+VPELV R
Sbjct: 158 RAFIESLNFNWDMVSDEEKHELGESLLASTYGVRR---LEDESWFKVDWEKVPELVERRG 214
Query: 190 VYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEALSMS 249
V++ KG AYV + + +S+V+ +F + L KAL T+R + R E DRLTPI+E LS +
Sbjct: 215 VFVRKGKAYVPVREQLSMVLAEFTARLEKALEFTSR---ALPRLDEDDRLTPILEHLSKN 271
Query: 250 YLGPDYSQTKEFGE-----ISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGL 304
+ D S + G I+ +D L++ FPLCMR+L +LR++ HLKH GR+Q L
Sbjct: 272 FGTSDSSYAEGEGSVPGAPITAASIDSLSQH-FPLCMRNLHMQLRKNSHLKHFGRLQYTL 330
Query: 305 FLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTD-----YTPYSC 359
FLKG+GL +EDAL FW+ F + + F+ +Y Y++RH YG G + Y PYSC
Sbjct: 331 FLKGIGLSLEDALVFWRQSF-KIFTDDEFNSKYKYNVRHAYGDVGGDANRRGRGYPPYSC 389
Query: 360 QKIIS-STPGVGDHHGCPYRHFSEENLRAALGRMGVGSR-AMEDVVDKVRNRHYQLACTL 417
QKI++ ++PG G HGCPYRHFS ENL L GV + + V + V Y +AC
Sbjct: 390 QKILTDNSPGAGQTHGCPYRHFSVENLINLLQATGVNDQEVLRGVREDVGKTRYHIACNR 449
Query: 418 TFEAVHSSSC----DAG---------INHPNQYFSDSH 442
FE H + D G I HPN YF S+
Sbjct: 450 VFEWAHKAELKKVRDEGSWSQTDLDTIVHPNTYFKRSY 487
>gi|240279780|gb|EER43285.1| DNA primase large subunit [Ajellomyces capsulatus H143]
Length = 504
Score = 269 bits (687), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 173/458 (37%), Positives = 243/458 (53%), Gaps = 44/458 (9%)
Query: 21 LPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEEMENLVRDLWKANM---R 77
L Y P E+ LE FE +A+DRLR+L + R K P E + + L +
Sbjct: 38 LNFYEIPPTQEITLEQFEQWAIDRLRILAELEACSYRNKTPAETASHITPLLNKFLPLSA 97
Query: 78 HPEASEDVN--------KDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAK 129
+ +S V+ KD SHF+LRL + TEDLR+ F +ET L+++RF L S+ +
Sbjct: 98 NTSSSTGVDQRLRNERQKDHYSHFILRLAFSSTEDLRRRFTRLETMLFKFRFQLDDSKER 157
Query: 130 RALMEEFDLPCKAISRTEFENAKEKLEQVARSFDQPLPTADAIFYKVPFEEVPELVAGRR 189
RA +E + +S E E L + D ++KV +E+VPELV R
Sbjct: 158 RAFIESLNFNWDMVSDEEKHELGESLLASTYGVRR---LEDESWFKVDWEKVPELVERRG 214
Query: 190 VYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEALSMS 249
V++ KG AYV + + +S+V+ +F + L KAL T+R + R E DRLTPI+E LS +
Sbjct: 215 VFVRKGKAYVPVREQLSMVLAEFTARLEKALEFTSR---ALPRLDEDDRLTPILEHLSKN 271
Query: 250 YLGPDYSQTKEFGE-----ISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGL 304
+ D S + G I+ +D L++ FPLCMR+L +LR++ HLKH GR+Q L
Sbjct: 272 FGTSDSSYAEGEGSVPGAPITAASIDSLSQH-FPLCMRNLHMQLRKNSHLKHFGRLQYTL 330
Query: 305 FLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTD-----YTPYSC 359
FLKG+GL +EDAL FW+ F E F+ +Y Y++RH YG G + Y PYSC
Sbjct: 331 FLKGIGLSLEDALVFWRQSFKIFTDDE-FNSKYKYNVRHAYGDVGGDANRRGRGYPPYSC 389
Query: 360 QKIIS-STPGVGDHHGCPYRHFSEENLRAALGRMGVGSR-AMEDVVDKVRNRHYQLACTL 417
QKI++ ++PG G HGCPYRHFS ENL L GV + + V + V Y +AC
Sbjct: 390 QKILTDNSPGAGQTHGCPYRHFSVENLINLLQATGVNDQEVLRGVREDVGKTRYHIACNR 449
Query: 418 TFEAVHSSSC----DAG---------INHPNQYFSDSH 442
FE H + D G I HPN YF S+
Sbjct: 450 VFEWAHKAELKKVRDEGSWSQTDLDTIVHPNTYFKRSY 487
>gi|451997176|gb|EMD89641.1| hypothetical protein COCHEDRAFT_1225277 [Cochliobolus
heterostrophus C5]
Length = 504
Score = 269 bits (687), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 172/466 (36%), Positives = 245/466 (52%), Gaps = 42/466 (9%)
Query: 21 LPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEEMENLVRDLWKANM---- 76
L Y P E+ LE+FE +A+DRL+VL + R K PEE ++ + +
Sbjct: 38 LNFYVLPPTAEITLEEFETWAIDRLKVLSELEACSFRNKSPEETAEYMKSILDKYLPLRS 97
Query: 77 ---RHPEASEDVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKRALM 133
R + E+ +D SHF+LRL + TEDLR+ F +ET L+ RF ++ +
Sbjct: 98 DSSRSQKLQEERRRDHYSHFILRLAFSSTEDLRRRFSRLETMLFTLRFKDDDIRERQDFV 157
Query: 134 EEFDLPCKAISRTEFENAKEKLEQVARSFDQPLPTADAIFYKVPFEEVPELVAGRRVYIH 193
+ +L + + E+ K +L+ + T D ++KV +E VPELVA R+V +
Sbjct: 158 KSLNLEWEEVK----EDEKRELKDDLHAASGIKKTDDQEWFKVDWERVPELVAQRKVLLR 213
Query: 194 KGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEALSMSYLGP 253
+G AYV + +SLVV +F L +AL LT R + R E DRL PI+ LS S+ P
Sbjct: 214 RGMAYVPQREQMSLVVAEFTKKLDEALELTAR---ALPRLDEDDRLAPILAHLSQSFTAP 270
Query: 254 D--YSQTKE----FGEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLK 307
D YS + I+ +D L+++ FPLCMR+L LRE+ HLKH GR+Q LFLK
Sbjct: 271 DAAYSTSDADINGLSTITANSIDTLSQN-FPLCMRNLHMTLRENSHLKHYGRLQYTLFLK 329
Query: 308 GVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTD-----YTPYSCQKI 362
G+GL +++ L FW+ F + + E+F KEY Y+IRH YG G + YTPYSCQK+
Sbjct: 330 GIGLSLDECLVFWRRSF-KLITDEKFQKEYKYNIRHAYGDVGGDANRRGRGYTPYSCQKL 388
Query: 363 ISS-TPGVGDHHGCPYRHFSEENLRAALGRMGVGSR-AMEDVVDKVRNRHYQLACTLTFE 420
++ PG G HGCPYR F+ +NL L R+GV R ++ V + V + Y +AC FE
Sbjct: 389 LTEPLPGPGQSHGCPYRTFTPDNLLTLLQRVGVNDRDTLKTVKEDVVKQRYHVACNRVFE 448
Query: 421 AVHSSSC----DAG---------INHPNQYFSDSHKILQPKNNNAA 453
H D G I HPN YF S + NA
Sbjct: 449 WSHKKEIKKVKDDGSWSNNDLDTIVHPNTYFKRSWLLKHLGEGNAG 494
>gi|189201810|ref|XP_001937241.1| DNA primase large subunit [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187984340|gb|EDU49828.1| DNA primase large subunit [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 504
Score = 269 bits (687), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 173/466 (37%), Positives = 243/466 (52%), Gaps = 42/466 (9%)
Query: 21 LPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEEMENLVRD-------LWK 73
L Y P E+ LE+FE +A++RL+VL + R K PEE ++ L
Sbjct: 38 LNFYVLPPTAEITLEEFETWAINRLKVLSELEACSFRNKGPEETAEYMKSILDKYLPLRS 97
Query: 74 ANMRHPEASEDVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKRALM 133
A+ R + E+ +D SHF+LRL + TEDLR+ F +ET L+ RF ++ +
Sbjct: 98 ASTRSQKLQEERKRDHYSHFILRLAFSSTEDLRRRFSRLETMLFTLRFKDDDLRERQDFV 157
Query: 134 EEFDLPCKAISRTEFENAKEKLEQVARSFDQPLPTADAIFYKVPFEEVPELVAGRRVYIH 193
+L + + E K++L A + T D ++KV +E VPELV R+V +
Sbjct: 158 RTLNLEWEEVKDDEKRELKDEL-HAASGIKK---TEDQEWFKVDWERVPELVGQRKVLLK 213
Query: 194 KGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEALSMSYLGP 253
+G AYV + +SLVV +F L +AL LT R + R E DRL PI+ LS S+ P
Sbjct: 214 RGKAYVPQREQMSLVVAEFTKKLDEALELTAR---ALPRLDEDDRLAPILAHLSQSFTAP 270
Query: 254 D--YSQTKE----FGEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLK 307
D YS + I+ +D L+++ FPLCMR+L LRE+ HLKH GR+Q LFLK
Sbjct: 271 DAAYSTSDANIDGLSTITANSIDMLSQN-FPLCMRNLHITLRENSHLKHYGRLQYTLFLK 329
Query: 308 GVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTD-----YTPYSCQKI 362
G+GL +++ + FW+ F + + E+F KEY Y+IRH YG G + YTPYSCQK+
Sbjct: 330 GIGLTLDECIVFWRRSF-KLITDEKFQKEYKYNIRHAYGDVGGDVNRRGRGYTPYSCQKL 388
Query: 363 ISS-TPGVGDHHGCPYRHFSEENLRAALGRMGVGSR-AMEDVVDKVRNRHYQLACTLTFE 420
++ PG G HGCPYR F +NL L R+GV R ++ V D V + Y +AC FE
Sbjct: 389 LTEPLPGPGQSHGCPYRTFQSDNLITMLQRVGVNDRDVLKTVKDDVTKQRYHVACNRVFE 448
Query: 421 AVHSSSC----DAG---------INHPNQYFSDSHKILQPKNNNAA 453
H D G I HPN YF S + NA
Sbjct: 449 WSHKKEIKKVKDDGSWSNNDLDTIVHPNTYFKRSWLLKHLGEGNAG 494
>gi|225562957|gb|EEH11236.1| DNA primase large subunit [Ajellomyces capsulatus G186AR]
Length = 504
Score = 268 bits (686), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 173/458 (37%), Positives = 243/458 (53%), Gaps = 44/458 (9%)
Query: 21 LPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEEMENLVRDLWKANM---R 77
L Y P E+ LE FE +A+DRLR+L + R K P E + + L +
Sbjct: 38 LNFYEIPPTQEITLEQFEQWAIDRLRILAELEACSYRNKTPAETASHITPLLNKFLPLSA 97
Query: 78 HPEASEDVN--------KDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAK 129
+ +S V+ KD SHF+LRL + TEDLR+ F +ET L+++RF L S+ +
Sbjct: 98 NTSSSTGVDQRLRNERQKDHYSHFILRLAFSSTEDLRRRFTRLETMLFKFRFQLDDSKER 157
Query: 130 RALMEEFDLPCKAISRTEFENAKEKLEQVARSFDQPLPTADAIFYKVPFEEVPELVAGRR 189
RA +E + +S E E L + D ++KV +E+VPELV R
Sbjct: 158 RAFIESLNFNWDMVSDEEKHELGESLLASTYGVRR---LEDESWFKVDWEKVPELVERRG 214
Query: 190 VYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEALSMS 249
V++ KG AYV + + +S+V+ +F + L KAL T+R + R E DRLTPI+E LS +
Sbjct: 215 VFVRKGKAYVPVREQLSMVLAEFTARLEKALEFTSR---ALPRLDEDDRLTPILEHLSKN 271
Query: 250 YLGPDYSQTKEFGE-----ISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGL 304
+ D S + G I+ +D L++ FPLCMR+L +LR++ HLKH GR+Q L
Sbjct: 272 FGTSDSSYAEGEGSVPGAPITAASIDSLSQH-FPLCMRNLHMQLRKNSHLKHFGRLQYTL 330
Query: 305 FLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTD-----YTPYSC 359
FLKG+GL +EDAL FW+ F E F+ +Y Y++RH YG G + Y PYSC
Sbjct: 331 FLKGIGLSLEDALVFWRQSFKIFTDDE-FNSKYKYNVRHAYGDVGGDANRRGRGYPPYSC 389
Query: 360 QKIIS-STPGVGDHHGCPYRHFSEENLRAALGRMGVGSR-AMEDVVDKVRNRHYQLACTL 417
QKI++ ++PG G HGCPYRHFS ENL L GV + + V + V Y +AC
Sbjct: 390 QKILTDNSPGAGQTHGCPYRHFSVENLINLLQATGVNDQEVLRGVREDVGKTRYHIACNR 449
Query: 418 TFEAVHSSSC----DAG---------INHPNQYFSDSH 442
FE H + D G I HPN YF S+
Sbjct: 450 VFEWAHKAELKKVRDEGSWSQTDLDTIVHPNTYFKRSY 487
>gi|410083026|ref|XP_003959091.1| hypothetical protein KAFR_0I01750 [Kazachstania africana CBS 2517]
gi|372465681|emb|CCF59956.1| hypothetical protein KAFR_0I01750 [Kazachstania africana CBS 2517]
Length = 492
Score = 268 bits (686), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 164/453 (36%), Positives = 246/453 (54%), Gaps = 39/453 (8%)
Query: 21 LPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEEMENLVRDLWKANMRHPE 80
L Y+ PQ E+ LE FE + ++RL+VL I AR K +E+E+ + K +
Sbjct: 41 LSFYQQQPQGEITLEQFEEWGIERLKVLLEIEALNARNKSIKEIESSI----KPTLTKFL 96
Query: 81 ASEDVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKRALMEEFDLPC 140
ASE KD SHF+LRL +CRT++LR+ F+ +ET L++ RF + +S + ++ +LP
Sbjct: 97 ASEK-QKDYYSHFILRLCFCRTKELREKFVKIETLLFKIRFNMLNSMDQLRFIKSLNLPS 155
Query: 141 -KAISRTEFENAKEKLEQVARSFDQ-PLPTADA----------IFYKVPFEEVPELVAGR 188
+ IS+ E ++L Q S Q L D F K+PFE V +LV R
Sbjct: 156 LQFISQNEKTKYSKELYQTVSSILQFQLNLTDEQSRVNFFQNEKFIKLPFENVIDLVGNR 215
Query: 189 RVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEALSM 248
+V++ G+ Y+ Q ++L+ +F +NL K L+ T + R E DRL PI+ LS
Sbjct: 216 QVFLKDGYVYLPQFQQLNLIAMEFSANLGKQLVKT---FQFLPRLNEDDRLVPILNHLSS 272
Query: 249 SYLGPDYSQTKEFGEISIKDLDQLARSS------FPLCMRHLFDKLREDHHLKHGGRMQL 302
Y D+ Q+ +F S ++++ + S FPLCM++L D L+++HHL++ GR QL
Sbjct: 273 GYTLADF-QSNQFTYTSDEEINAESVWSEEIYLNFPLCMKNLMDGLKQNHHLRYYGRQQL 331
Query: 303 GLFLKGVGLRMEDALAFWKAEFSQ--KVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQ 360
LFLKG+GL E+++ FW F+ + E+F+KEY Y+ RHNYG EG R +Y P+ C+
Sbjct: 332 SLFLKGIGLSYEESIKFWTKAFTDGGHISLEKFNKEYRYNFRHNYGLEGNRINYKPWDCR 391
Query: 361 KIISST-PGVGDHHGCPYRHFSEENLRAALGRMGVGSRAMEDVVDKVRNRHYQLACTLTF 419
I+S P GD HGCP+R +S E L L M + + V+D + Y +A T F
Sbjct: 392 TILSKPRPSKGDFHGCPFRDWSPEKLSTELSAMNLTQSQISSVLDSCQKTEYTVALTKVF 451
Query: 420 EAVH---SSSCDAGIN------HPNQYFSDSHK 443
E H + D IN HPN YF S +
Sbjct: 452 EFTHGYKGNPNDLEINEQNHIAHPNLYFEKSRQ 484
>gi|169766632|ref|XP_001817787.1| DNA primase large subunit [Aspergillus oryzae RIB40]
gi|238483381|ref|XP_002372929.1| DNA primase large subunit [Aspergillus flavus NRRL3357]
gi|83765642|dbj|BAE55785.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220700979|gb|EED57317.1| DNA primase large subunit [Aspergillus flavus NRRL3357]
Length = 500
Score = 268 bits (686), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 173/463 (37%), Positives = 242/463 (52%), Gaps = 45/463 (9%)
Query: 21 LPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEEMENLVRDLWK------A 74
L Y P E+ LE FE +A+DRLR+L I R K P E E + L + +
Sbjct: 38 LNFYEVPPTAEITLEQFEQWAIDRLRILAEIEACSYRNKSPAETEAHITPLLQKYLPLSS 97
Query: 75 NMRHPEASEDV------NKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEA 128
N + D KD SHF+LRL + TEDLR+ F ET L+R+RF S
Sbjct: 98 NTSSSLGATDQRLKNERQKDHYSHFILRLAFSATEDLRRRFARAETMLFRFRFQKDDSRE 157
Query: 129 KRALMEEFDLPCKAISRTEFENAKEKLEQVARSFDQPLPTADAIFYKVPFEEVPELVAGR 188
+RA +E +L + +S E E L + + +YKV +E VPELV R
Sbjct: 158 RRAFIESLNLDWEPVSDEERRELSEHLVNATPGLRR---VDEESWYKVDWERVPELVERR 214
Query: 189 RVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEALSM 248
V++++G AYV + +S+++ +F + L ++L LT+R + R E DRLTPI+ LS
Sbjct: 215 SVFLYRGKAYVPGREQLSMIIAEFTARLERSLELTSR---ALPRLDEDDRLTPILNHLSK 271
Query: 249 SYLGPD--YSQTKEF---GEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLG 303
++ + YS+ + F I+ +++DQL++ FPLCMR L LR+++HLKH GR+Q
Sbjct: 272 NFGSAESVYSEGEGFVDGAPITAQNIDQLSQH-FPLCMRSLHMSLRKNNHLKHYGRLQYT 330
Query: 304 LFLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTD-----YTPYS 358
LFLKG+GL +E+ + FW+ F E F+ Y Y+IRH YG G + Y PYS
Sbjct: 331 LFLKGIGLSLEECILFWRQSFKGFTDDE-FNSRYKYNIRHAYGDVGGDVNRRGRGYPPYS 389
Query: 359 CQKIIS-STPGVGDHHGCPYRHFSEENLRAALGRMGVGSRA-MEDVVDKVRNRHYQLACT 416
CQKI+ S PGVG HGCPYRHFS +NL L GV R + V + V Y +AC
Sbjct: 390 CQKILGDSNPGVGQTHGCPYRHFSVDNLIGLLQSTGVSDRELLRGVREDVEKTRYHIACN 449
Query: 417 LTFEAVHSSSC-----DAGIN--------HPNQYFSDSHKILQ 446
FE H + D N HPN YF S+ + Q
Sbjct: 450 RVFEWTHKAEIKRVKEDGTWNQTDLDTIVHPNTYFKRSYLLKQ 492
>gi|408389201|gb|EKJ68674.1| hypothetical protein FPSE_11147 [Fusarium pseudograminearum CS3096]
Length = 500
Score = 268 bits (686), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 169/454 (37%), Positives = 246/454 (54%), Gaps = 40/454 (8%)
Query: 21 LPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEEMENLVRDLWKANMRHPE 80
L Y P ++ LE FE +A+DRLRVL + R K P E ++ + K ++
Sbjct: 38 LNFYTDPPTADITLEQFEQWAIDRLRVLAELEACAFRNKTPAETATHMKPILKQHLNLEA 97
Query: 81 AS-------EDVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKRALM 133
S E KD SHF+LRL + TEDLR+ F +ET L+R R + A +
Sbjct: 98 NSSSSKKLFEQRQKDHYSHFILRLAFSSTEDLRRRFTRVETMLFRLRLNEDDLSERSAFV 157
Query: 134 EEFDLP-CKAISRTEFENAKEKLEQVARSFDQPLPTADAIFYKVPFEEVPELVAGRRVYI 192
+ L C+ + TE + + E A + ++ D ++KV +E VP+L+ RRV++
Sbjct: 158 KTLGLDWCEDV--TEDDRREYAAELAAFTSNRKGENDDDTWFKVDWERVPDLIESRRVFL 215
Query: 193 HKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEALSMSYLG 252
G A+V + +VV++F S L + L LT R + R E DRLTPI+ LS +++
Sbjct: 216 KAGKAFVPGREQAGMVVSEFTSRLERQLELTAR---ALPRLDEDDRLTPILNHLSKNFIT 272
Query: 253 PDYSQTKEFG-----EISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLK 307
PD S T EIS ++D L++ FP CM HL LR D HLKH GR+Q LFLK
Sbjct: 273 PDASYTSGTAAVPGAEISAANIDNLSQH-FPACMSHLHRSLRRDAHLKHFGRLQYSLFLK 331
Query: 308 GVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTD-----YTPYSCQKI 362
G+GL +E+ L FW+ F+ K+ ++F+KEY Y+IRH YG G ++ Y+P+SCQKI
Sbjct: 332 GIGLNLEECLVFWRKSFN-KMTDDKFNKEYRYNIRHVYGDVGGDSNRRGGGYSPFSCQKI 390
Query: 363 ISS-TPGVGDHHGCPYRHFSEENLRAALGRMGVGSRAMEDVVDKVRNRH-YQLACTLTFE 420
++ PG G+ HGCPYRHF+ ENL A + MGV R++ V + +++ + +AC FE
Sbjct: 391 LTEHPPGPGEAHGCPYRHFNLENLSALVQAMGVNDRSVLQGVKEDKDKQKFHMACNRVFE 450
Query: 421 AVHSSSC----DAG---------INHPNQYFSDS 441
+H D G I HPN+YF S
Sbjct: 451 HLHKQEIRKAKDEGVMTQSQLETIVHPNEYFKRS 484
>gi|358400317|gb|EHK49648.1| hypothetical protein TRIATDRAFT_289650 [Trichoderma atroviride IMI
206040]
Length = 500
Score = 268 bits (686), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 170/454 (37%), Positives = 244/454 (53%), Gaps = 38/454 (8%)
Query: 21 LPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEEMENLVRDLWKANMRHPE 80
L Y AP ++ LE FE +A+DRLRVL + R + P E + ++ + +
Sbjct: 38 LNFYADAPTADITLEQFEQWAIDRLRVLAELEACSFRNRSPAETASHMKPILDKYLPLDS 97
Query: 81 ASEDVNK-------DIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKRALM 133
S K D SHF+LRL + TEDLR+ F +ET L+R RF + A +
Sbjct: 98 NSSSNTKIISQRQKDHYSHFILRLAFSSTEDLRRRFSRVETMLFRMRFNSDDLNERSAFV 157
Query: 134 EEFDLPCKAISRTEFENAKEKLEQVARSFDQPLPTADAIFYKVPFEEVPELVAGRRVYIH 193
DL TE E + E A + + + D ++KV +E VP+LV RRV++
Sbjct: 158 SGLDLDWWE-PVTEDEKVRYGAELAAMVSGKKMNSEDNTWFKVDWERVPDLVESRRVFLK 216
Query: 194 KGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEALSMSYLGP 253
G AYV + S+VV +F S L + L LT R + R E DRLTPI+ LS +++ P
Sbjct: 217 AGKAYVPGREQSSMVVAEFTSRLDRQLELTAR---ALPRLDEDDRLTPILNHLSKNFITP 273
Query: 254 DY-----SQTKEFGEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKG 308
D S +IS ++D L++ FP CM +L LR D HLKH GR+Q LFLKG
Sbjct: 274 DSTYVSGSTAPAGAQISAANIDNLSQH-FPACMSNLHRSLRRDAHLKHYGRLQYTLFLKG 332
Query: 309 VGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTD-----YTPYSCQKII 363
+GL +E+ L FW++ F KV + F+KEY Y+IRH YG+ G ++ Y+P+SCQKI+
Sbjct: 333 IGLNLEECLMFWRSGF-HKVTDDTFNKEYRYNIRHAYGEVGGDSNRRGGGYSPFSCQKIL 391
Query: 364 SS-TPGVGDHHGCPYRHFSEENLRAALGRMGVGSRA-MEDVVDKVRNRHYQLACTLTFEA 421
+ PG G+ HGCPYRHF+ ENL A + MGV R+ ++ + + N+ + +AC FE
Sbjct: 392 TEHPPGPGEAHGCPYRHFNLENLNALVQAMGVSDRSVLQGIKEDKDNQKFHMACNRVFEH 451
Query: 422 VHSSSC----DAG---------INHPNQYFSDSH 442
+H + D G I HPN+YF S+
Sbjct: 452 LHKAEIKKAKDEGVMTSNQLETIVHPNEYFKRSY 485
>gi|156843193|ref|XP_001644665.1| hypothetical protein Kpol_1056p7 [Vanderwaltozyma polyspora DSM
70294]
gi|156115313|gb|EDO16807.1| hypothetical protein Kpol_1056p7 [Vanderwaltozyma polyspora DSM
70294]
Length = 515
Score = 268 bits (686), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 158/455 (34%), Positives = 250/455 (54%), Gaps = 38/455 (8%)
Query: 19 STLPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEEMENLVRDLWKANM-R 77
S + Y PQ E+ L+ FE +A+DRL+VL I ++R K +E+E +++ L + +
Sbjct: 50 SKISFYELPPQGEITLDQFETWAIDRLKVLLEIESCISRNKSIKEIEIIIKPLLQKYLPL 109
Query: 78 HPEASEDVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKRALMEEFD 137
+ ++ +D KD SH++LRL +CR+++LR F+ ET L++ R+ + +S + + +
Sbjct: 110 NADSLDDKKKDYYSHYILRLCFCRSKELRDKFVRAETLLFKLRYTMLTSTDQSKFVNSLN 169
Query: 138 LPC-KAISRTEFENAKEKLEQV---ARSFDQPLPTADAI--------FYKVPFEEVPELV 185
LP + IS+ E + ++L A F L F K+PFE V +LV
Sbjct: 170 LPLLQFISQEEKKELSQQLFTTISPALQFQLNLTDDQQRRQFFQQEKFIKLPFENVIDLV 229
Query: 186 AGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEA 245
R+V++ G+AY+ Q ++L+ T+F + LS L+ T + R E DRL PI+
Sbjct: 230 GSRQVFLKNGYAYLPQFQQLNLLSTEFSNKLSDELMKT---YQFLPRLNEDDRLIPILHH 286
Query: 246 LSMSYLGPDYSQTKEFG------EISIKDL-DQLARSSFPLCMRHLFDKLREDHHLKHGG 298
LS Y D+ +++F EI+ K + + +PLC+++L D L E HHL++ G
Sbjct: 287 LSSGYSIADFQSSQQFNSSNEDNEINAKSVYSKEISECYPLCVKNLMDGLNETHHLRYNG 346
Query: 299 RMQLGLFLKGVGLRMEDALAFWKAEFSQKVG---AERFDKEYAYSIRHNYGKEGKRTDYT 355
R QL FLKG+GL ++A+ FW F+ K G ++F+KEY Y+ RHNYG EG R +Y
Sbjct: 347 RQQLSFFLKGIGLSCDEAMNFWTDAFTTKGGHLTVDKFNKEYRYNFRHNYGLEGNRINYK 406
Query: 356 PYSCQKIISST-PGVGDHHGCPYRHFSEENLRAALGRMGVGSRAMEDVVDKVRNRHYQLA 414
P+ C+ I+S P G+ HGCPYR ++EE L + L ++ + + A+ V+D + Y A
Sbjct: 407 PWDCRTILSKPRPARGEFHGCPYRDWTEEKLSSELNKLNLSNHAITSVLDSCKKNEYTFA 466
Query: 415 CTLTFEAVH---------SSSCDAG--INHPNQYF 438
CT FE H S + DA I HPN YF
Sbjct: 467 CTKVFEETHPGIENQSNASENTDASSHIAHPNLYF 501
>gi|258565989|ref|XP_002583739.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237907440|gb|EEP81841.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 504
Score = 268 bits (686), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 168/463 (36%), Positives = 246/463 (53%), Gaps = 44/463 (9%)
Query: 18 VSTLPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEEMENLVRDLWKANM- 76
V L Y P E+ LE FE +A+DRLR+L + R K P E + L + +
Sbjct: 35 VHRLNFYEIPPTAEITLEQFEQWAIDRLRILSELEACSYRNKTPAETAAHITPLLQKFLP 94
Query: 77 --RHPEASEDVN--------KDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSS 126
+ +S V+ KD SHF+LRL + TEDLR+ F+ +E L+++RF S
Sbjct: 95 LHSNTASSSGVDQRLKDERQKDHYSHFILRLAFSSTEDLRRRFVRLEAMLFKFRFQQDDS 154
Query: 127 EAKRALMEEFDLPCKAISRTEFENAKEKLEQVARSFDQPLPTADAIFYKVPFEEVPELVA 186
+ +RA +E + ++ E + E L + T D ++KV +E VPELV
Sbjct: 155 KERRAFVESLNFDWDILADEEKQELGESLLNATPGLKR---TDDEGWFKVDWERVPELVE 211
Query: 187 GRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEAL 246
+ + + KG AYV + + +S+++ +F + L KAL T+R + R E DRL PI++ L
Sbjct: 212 RKGILVKKGKAYVPLREQLSMILAEFNARLEKALEFTSR---ALPRLDEDDRLIPILDHL 268
Query: 247 SMSYLGPDYSQTKEFGE-----ISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQ 301
S ++ D S T G I+ +D L+R FPLCMR+L +LR++ HLKH GR+Q
Sbjct: 269 SKNFGTSDTSYTDGEGAVPGAAINAASVDALSRH-FPLCMRNLHMQLRKNAHLKHFGRLQ 327
Query: 302 LGLFLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTD-----YTP 356
LFLKG+GL +ED L FW+ F + + + F+ +Y Y++RH YG G + Y P
Sbjct: 328 YTLFLKGIGLSLEDCLIFWRQSF-RNINDDEFNSKYRYNVRHAYGDVGGDANRRGRGYPP 386
Query: 357 YSCQKIIS-STPGVGDHHGCPYRHFSEENLRAALGRMGVGSR-AMEDVVDKVRNRHYQLA 414
YSCQKI++ + PG G HGCPYRHFS +NL + L GV R ++ V + V Y +A
Sbjct: 387 YSCQKILTDNAPGAGQTHGCPYRHFSVDNLISLLQATGVNDRETLQGVREDVAKTRYHIA 446
Query: 415 CTLTFEAVHSSSC----DAGIN---------HPNQYFSDSHKI 444
C FE VH D GI HPN YF S+++
Sbjct: 447 CNRVFEYVHKDDLKKAKDEGIMNQADLDTIVHPNTYFKRSYQL 489
>gi|449547445|gb|EMD38413.1| hypothetical protein CERSUDRAFT_153258 [Ceriporiopsis subvermispora
B]
Length = 493
Score = 268 bits (685), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 161/454 (35%), Positives = 250/454 (55%), Gaps = 31/454 (6%)
Query: 21 LPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEEMENLVRDLWKANMR-HP 79
L Y P ++ +E+FE A+DRLRVL I + AR + +E++ + + ++ H
Sbjct: 30 LNFYDIPPVEDITIEEFETCAIDRLRVLAEIESSFARNRPYDELKTITLAQCQKHLPLHS 89
Query: 80 EASEDVN------KDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKRALM 133
++ ++ +D I HFVLRL +CR+E+LR+ F+ E+AL+R R+ + +
Sbjct: 90 SSAHTMDLDSERRRDHIGHFVLRLAFCRSEELRRRFVKAESALFRTRYDSDDHTERGEFL 149
Query: 134 EEFDLPCKAISRTEFENAKEKLEQVARSFDQPLPTADAIFYKVPFEEVPELVAGRRVYIH 193
D + E + +E+L A + +YKV + VP+LV RRV++
Sbjct: 150 NSRDFGWIKVQDDERDLYREELAAAA-PITKEANADGGNYYKVKWTRVPDLVEKRRVFLK 208
Query: 194 KGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEALSMSYLGP 253
G+AYV + S+V +F+ L+KAL +T + + R E R+ PI+ LS +L
Sbjct: 209 GGYAYVPSREQFSIVFQEFQMTLNKALEMTAK---ALPRLDEDTRIVPILNNLSQGFLAG 265
Query: 254 DYSQ-----TKEFGEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKG 308
S+ E G I+ ++ LAR FP CMR+L + LR D HLKH GR Q GLFLK
Sbjct: 266 VSSEWSTASAAEGGGITADMVEDLARRHFPACMRNLQETLRRDRHLKHFGRWQYGLFLKV 325
Query: 309 VGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQKIISS-TP 367
+GL +E+A+AFW+ FS + ++F+KEY Y+IRH YG EGKR +Y SC +I+++ P
Sbjct: 326 LGLPIEEAIAFWRKSFSN-IQEDKFNKEYKYNIRHLYGLEGKRANYPAKSCTQILTADQP 384
Query: 368 GVGDHHGCPYRHFSEENLRAALGRM----GVGSRAMEDVVDKVRNRHYQLACTLTFEAVH 423
G D HGCPYRHFS +NL+ AL M G+ + + +++ V+ HY +ACT FE H
Sbjct: 385 GSSDSHGCPYRHFSPDNLQTALLSMYSSQGLTAADLPEIMSTVKAGHYHVACTRVFEITH 444
Query: 424 SSSC---------DAGINHPNQYFSDSHKILQPK 448
++ + HPNQY + S ++ + K
Sbjct: 445 ATRGVKKGEGVGDGESVTHPNQYAARSRELERGK 478
>gi|391864771|gb|EIT74065.1| eukaryotic-type DNA primase, large subunit [Aspergillus oryzae
3.042]
Length = 500
Score = 268 bits (685), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 172/463 (37%), Positives = 242/463 (52%), Gaps = 45/463 (9%)
Query: 21 LPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEEMENLVRDLWK------A 74
L Y P E+ LE FE +A+DRLR+L I R K P E E + L + +
Sbjct: 38 LNFYEVPPTAEITLEQFEQWAIDRLRILAEIEACSYRNKSPAETEAHITPLLQKYLPLSS 97
Query: 75 NMRHPEASEDV------NKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEA 128
N + D KD SHF+LRL + TEDLR+ F ET L+R+RF S
Sbjct: 98 NTSSSLGATDQRLKNERQKDHYSHFILRLAFSATEDLRRRFARAETMLFRFRFQKDDSRE 157
Query: 129 KRALMEEFDLPCKAISRTEFENAKEKLEQVARSFDQPLPTADAIFYKVPFEEVPELVAGR 188
+RA +E +L + +S E E L + + +YKV +E VPELV R
Sbjct: 158 RRAFIESLNLDWEPVSDEERRELSEHLVNATPGLRR---VDEESWYKVDWERVPELVERR 214
Query: 189 RVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEALSM 248
+++++G AYV + +S+++ +F + L ++L LT+R + R E DRLTPI+ LS
Sbjct: 215 SIFLYRGKAYVPGREQLSMIIAEFTARLERSLELTSR---ALPRLDEDDRLTPILNHLSK 271
Query: 249 SYLGPD--YSQTKEF---GEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLG 303
++ + YS+ + F I+ +++DQL++ FPLCMR L LR+++HLKH GR+Q
Sbjct: 272 NFGSAESVYSEGEGFVDGAPITAQNIDQLSQH-FPLCMRSLHMSLRKNNHLKHYGRLQYT 330
Query: 304 LFLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTD-----YTPYS 358
LFLKG+GL +E+ + FW+ F E F+ Y Y+IRH YG G + Y PYS
Sbjct: 331 LFLKGIGLSLEECILFWRQSFKGFTDDE-FNSRYKYNIRHAYGDVGGDVNRRGRGYPPYS 389
Query: 359 CQKIIS-STPGVGDHHGCPYRHFSEENLRAALGRMGVGSRA-MEDVVDKVRNRHYQLACT 416
CQKI+ S PGVG HGCPYRHFS +NL L GV R + V + V Y +AC
Sbjct: 390 CQKILGDSNPGVGQTHGCPYRHFSVDNLIGLLQSTGVSDRELLRGVREDVEKTRYHIACN 449
Query: 417 LTFEAVHSSSC-----DAGIN--------HPNQYFSDSHKILQ 446
FE H + D N HPN YF S+ + Q
Sbjct: 450 RVFEWTHKAEIKRVKEDGTWNQTDLDTIVHPNTYFKRSYLLKQ 492
>gi|389748956|gb|EIM90133.1| DNA primase large subunit [Stereum hirsutum FP-91666 SS1]
Length = 487
Score = 268 bits (684), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 159/449 (35%), Positives = 246/449 (54%), Gaps = 33/449 (7%)
Query: 21 LPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEEMENL-VRDLWKANMRHP 79
L Y P ++ +E+FE A+DRLRVL I AR + +E++ + + K +
Sbjct: 23 LNFYDKPPVEDITIEEFETCAIDRLRVLAEIESGFARNRPYDELKTIAIAQCEKYIPLNA 82
Query: 80 EASEDVN------KDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKRALM 133
++ VN KD I HFVLRL +CR+E+LR+ F+ E L+R R+ ++ ++ +
Sbjct: 83 TSATTVNRDAQRRKDHIGHFVLRLAFCRSEELRRRFVKAEMTLFRVRYDTDGNDERKEFL 142
Query: 134 EEFDLPCKAISRTEFENAKEKLEQVARSFDQPLPTADAIFYKVPFEEVPELVAGRRVYIH 193
D ++ E E+L + D + T D FYKV + VP+L+ R+V +
Sbjct: 143 NSRDFNWIQVNEKEKVGLAEELAAASPGLD--INTQD--FYKVRWTRVPDLIERRKVLLK 198
Query: 194 KGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEALSMSYLG- 252
G AYV + S+V +F+ +L L T + S R E +R+ PI+ LS +L
Sbjct: 199 AGWAYVPAREQSSIVFQEFQVHLQNQLEKTAK---SLPRLDEDNRIVPILNNLSQGFLAG 255
Query: 253 --PDYSQTKEFGE-ISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGV 309
++ + GE I +D LAR FP+CMR+L + L+ DHHLKH GR+Q GLF+K +
Sbjct: 256 VPSEWGAPEGSGEEIRADMIDDLARKHFPMCMRNLHENLKRDHHLKHFGRLQYGLFIKAL 315
Query: 310 GLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQKII-SSTPG 368
GL +++A+ FW+ FS + ++F+K Y Y+IRH+YG EGKR +Y SCQ+I+ + PG
Sbjct: 316 GLSIDEAVLFWRRSFS-GMTDDQFNKGYKYNIRHSYGLEGKRANYPAKSCQQILMTDQPG 374
Query: 369 VGDHHGCPYRHFSEENLRAAL----GRMGVGSRAMEDVVDKVRNRHYQLACTLTFEAVHS 424
D HGCPYRHFS +NL+ AL G+ + + D+++ V+ HY +ACT FE H+
Sbjct: 375 SNDSHGCPYRHFSVDNLQTALLSTYSSQGLTTADLPDILNSVKGGHYHVACTRVFEITHA 434
Query: 425 S---------SCDAGINHPNQYFSDSHKI 444
+ + HPNQY S ++
Sbjct: 435 NQGVKKMEGVGGGESVTHPNQYAQRSREL 463
>gi|330915939|ref|XP_003297232.1| hypothetical protein PTT_07558 [Pyrenophora teres f. teres 0-1]
gi|311330231|gb|EFQ94685.1| hypothetical protein PTT_07558 [Pyrenophora teres f. teres 0-1]
Length = 504
Score = 267 bits (683), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 170/454 (37%), Positives = 240/454 (52%), Gaps = 42/454 (9%)
Query: 21 LPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEEMENLVRD-------LWK 73
L Y P E+ LE+FE +A++RL+VL + R K PEE ++ L
Sbjct: 38 LNFYVLPPTAEITLEEFETWAINRLKVLSELEACSFRNKGPEETAEYMKSILDKYLPLRS 97
Query: 74 ANMRHPEASEDVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKRALM 133
A+ R + E+ +D SHF+LRL + TEDLR+ F +ET L+ RF ++ +
Sbjct: 98 ASTRSQKLQEERKRDHYSHFILRLAFSSTEDLRRRFSRLETMLFTLRFKDDDLRERQGFV 157
Query: 134 EEFDLPCKAISRTEFENAKEKLEQVARSFDQPLPTADAIFYKVPFEEVPELVAGRRVYIH 193
+L + E +++L A + T D ++KV +E VPELV R+V +
Sbjct: 158 RTLNLDWDEVKDDEKRELRDEL-HAASGIKK---TEDQEWFKVDWERVPELVGQRKVLLK 213
Query: 194 KGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEALSMSYLGP 253
+G AYV + +SLVV +F L +AL LT R + R E DRL PI+ LS S+ P
Sbjct: 214 RGKAYVPQREQMSLVVAEFTRKLDEALELTAR---ALPRLDEDDRLAPILAHLSQSFTAP 270
Query: 254 D--YSQTKE----FGEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLK 307
D YS + I+ +D L+++ FPLCMR+L LRE+ HLKH GR+Q LFLK
Sbjct: 271 DAAYSTSDANIDGLSTITANSIDTLSQN-FPLCMRNLHMTLRENSHLKHYGRLQYTLFLK 329
Query: 308 GVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTD-----YTPYSCQKI 362
G+GL +++ + FW+ F + + E+F KEY Y+IRH YG G ++ YTPYSCQK+
Sbjct: 330 GIGLTLDECIVFWRRSF-KLITDEKFQKEYKYNIRHAYGDVGGDSNRRGRGYTPYSCQKL 388
Query: 363 ISS-TPGVGDHHGCPYRHFSEENLRAALGRMGVGSR-AMEDVVDKVRNRHYQLACTLTFE 420
++ PG G HGCPYR F +NL L R+GV R ++ V D V + Y +AC FE
Sbjct: 389 LTEPLPGPGQSHGCPYRSFQSDNLITMLQRVGVNDRDVLKTVKDDVAKQRYHVACNRVFE 448
Query: 421 AVHSSSC----DAG---------INHPNQYFSDS 441
H D G I HPN YF S
Sbjct: 449 WSHKKEIKKVKDEGSWSNNDLDTIVHPNTYFKRS 482
>gi|367038309|ref|XP_003649535.1| hypothetical protein THITE_2108112 [Thielavia terrestris NRRL 8126]
gi|346996796|gb|AEO63199.1| hypothetical protein THITE_2108112 [Thielavia terrestris NRRL 8126]
Length = 501
Score = 267 bits (683), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 172/458 (37%), Positives = 243/458 (53%), Gaps = 43/458 (9%)
Query: 21 LPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEEMENLVRDLWKANMRHP- 79
L Y P ++ LE FE +A+DRLRVL + R + P E ++ L + P
Sbjct: 33 LNFYSTPPTADITLEQFEQWAIDRLRVLAELEACSFRNRTPAETAAHMKPLLDKYL--PL 90
Query: 80 EASEDVN--------KDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKRA 131
+AS N KD SHF+LRL + TEDLR+ F +ET L+R RF S + A
Sbjct: 91 DASSSGNSKLHAQRQKDHYSHFILRLAFASTEDLRRRFARVETMLFRLRFQTDDSRERAA 150
Query: 132 LMEEFDLPCKAISRTEFENAKEKLEQVAR--SFDQPLPTADAIFYKVPFEEVPELVAGRR 189
+ +L + + E +L S + D + KV + VP+LV R+
Sbjct: 151 FVRTLNLDWEPVPEEEKRALAPQLATTVGFGSGKRAQQVLDEDWCKVDWTRVPDLVRDRK 210
Query: 190 VYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEALSMS 249
V++ G AYV + S+V+ F S L +AL LT R + R E DRLTPI+ LS +
Sbjct: 211 VFLKGGKAYVPGREQQSMVLNTFTSRLERALELTAR---ALPRLDEDDRLTPILNHLSKN 267
Query: 250 YLGPDYSQTK-----EFGEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGL 304
++ PD S E EI+ +++D L++ FP+CM HL LR D HLKH GR+Q L
Sbjct: 268 FIAPDSSYNGSSAAIEGAEITARNIDNLSQH-FPMCMAHLHRSLRRDAHLKHFGRLQYTL 326
Query: 305 FLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEG-----KRTDYTPYSC 359
FLKG+GL +E+ L FW++ FS K+ + F+KEY Y++RH YG G + Y+PYSC
Sbjct: 327 FLKGIGLNLEECLVFWRSSFS-KITDDTFNKEYRYNVRHAYGDVGGDANRRSGGYSPYSC 385
Query: 360 QKIISS-TPGVGDHHGCPYRHFSEENLRAALGRMGVGS-RAMEDVVDKVRNRHYQLACTL 417
QKI++ PG GD HGCPYRHFS ENL L GV + ++ V++ ++ Y +AC
Sbjct: 386 QKILTEHAPGPGDAHGCPYRHFSMENLATLLRASGVTDPKVLQGVMEDKESQKYHMACNR 445
Query: 418 TFEAVHSSSC----DAG---------INHPNQYFSDSH 442
FE +H + D G I HPN+YF S+
Sbjct: 446 VFEHLHKAELKRAKDDGVMTAAQLETIVHPNEYFKRSY 483
>gi|342876492|gb|EGU78101.1| hypothetical protein FOXB_11372 [Fusarium oxysporum Fo5176]
Length = 586
Score = 267 bits (682), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 170/455 (37%), Positives = 247/455 (54%), Gaps = 42/455 (9%)
Query: 21 LPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEEMENLVRDLWKANMRHPE 80
L Y P ++ LE FE +A+DRLRVL + R K P E ++ + K ++ H E
Sbjct: 38 LNFYTDPPTADITLEQFEQWAIDRLRVLAELEACSFRNKTPAETATHMKPILKKHL-HLE 96
Query: 81 AS--------EDVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKRAL 132
A+ E KD SHF+LRL + TEDLR+ F +ET L+R R + A
Sbjct: 97 ANSSGSKKIFEQRQKDHYSHFILRLAFSSTEDLRRRFTRVETMLFRLRLNDDDLAERSAF 156
Query: 133 MEEFDLP-CKAISRTEFENAKEKLEQVARSFDQPLPTADAIFYKVPFEEVPELVAGRRVY 191
++ L C+ + T+ + + E A + ++ D ++KV +E VPEL+ RRV+
Sbjct: 157 VKTLGLDWCEDV--TDEDRREYAAELAAFASNRKGENDDDTWFKVDWERVPELIESRRVF 214
Query: 192 IHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEALSMSYL 251
+ G A+V + +VV++F S L + L LT R + R E DRLTPI+ LS +++
Sbjct: 215 LKAGKAFVPGREQAGMVVSEFSSRLERQLELTAR---ALPRLDEDDRLTPILNHLSKNFI 271
Query: 252 GPDYSQTKEFG-----EISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFL 306
PD S EIS ++D L++ FP CM HL LR D HLKH GR+Q LFL
Sbjct: 272 TPDASYMSSTAAVPGAEISAANIDNLSQH-FPACMSHLHRSLRRDAHLKHYGRLQYSLFL 330
Query: 307 KGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTD-----YTPYSCQK 361
KG+GL +E+ L FW+ F K+ ++F+KEY Y+IRH YG G ++ Y+P+SCQK
Sbjct: 331 KGIGLNLEECLVFWRKSF-HKITDDKFNKEYRYNIRHVYGDVGGDSNRRGGGYSPFSCQK 389
Query: 362 IISS-TPGVGDHHGCPYRHFSEENLRAALGRMGVGSRAMEDVVDKVRNRH-YQLACTLTF 419
I++ PG G+ HGCPYRHF+ ENL A + MGV R++ V + +++ + +AC F
Sbjct: 390 ILTEHPPGPGEAHGCPYRHFNMENLSALVQAMGVNDRSVLQGVKEDKDKQKFHMACNRVF 449
Query: 420 EAVHSSSC----DAG---------INHPNQYFSDS 441
E +H D G I HPN+YF S
Sbjct: 450 EHLHKQEIKKAKDEGVMTQQQLETIVHPNEYFKRS 484
>gi|340905141|gb|EGS17509.1| DNA polymerase alpha DNA-like protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 503
Score = 267 bits (682), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 165/460 (35%), Positives = 244/460 (53%), Gaps = 47/460 (10%)
Query: 21 LPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEEMENLVRDLWKANM---- 76
L Y P ++ LE FE +A+DRLR+L + R K P E ++ L +
Sbjct: 38 LNFYATPPTADITLEQFEQWAIDRLRILAELEACSFRNKTPAETAAYMKPLLDKYLPLDA 97
Query: 77 ---RHPEASEDVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKRALM 133
+ KD SHF+LRL + TE+LR+ F +ET L+R RF S + A +
Sbjct: 98 NSSSSSQLHSQRQKDHYSHFILRLAFSSTEELRRRFARVETMLFRLRFQTDDSRERAAFI 157
Query: 134 EEFDLPCKAISRTEFENAKEKLEQ---VARSF---DQPLPTADAIFYKVPFEEVPELVAG 187
++ + + E+ K +L Q V F + D +YKV + VP+L+ G
Sbjct: 158 RSLNIEWEPV----LEDEKGELSQQLIVTAGFGYGKRAQQVMDEDWYKVDWTRVPDLIEG 213
Query: 188 RRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEALS 247
R+V++ G AYV S+++ +F L +AL LT R + R E DRLTPI+ LS
Sbjct: 214 RKVFVKAGKAYVPGPLQHSIIMNEFTRRLERALELTAR---ALPRLDEDDRLTPILNHLS 270
Query: 248 MSYLGPDYSQTK-----EFGEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQL 302
+++ PD S + E EIS +++D LA+ FPLCM+HL + LR D HLKH GR+Q
Sbjct: 271 KNFIAPDSSYSGSATAVEGAEISARNIDNLAQH-FPLCMQHLHNTLRRDCHLKHYGRLQY 329
Query: 303 GLFLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEG-----KRTDYTPY 357
LFLKG+GL +E+ L FW+ F +K+ + F+KEY Y++RH YG G + Y+P+
Sbjct: 330 TLFLKGIGLNLEECLIFWRTAF-KKISDDTFNKEYRYNVRHAYGDVGGDANRRSGGYSPF 388
Query: 358 SCQKIISS-TPGVGDHHGCPYRHFSEENLRAALGRMGVGSRA-MEDVVDKVRNRHYQLAC 415
SCQKI++ PG G+ HGCP+RHFS +NL L GV RA ++ + + ++ Y +AC
Sbjct: 389 SCQKILTEHAPGPGEAHGCPFRHFSMDNLTTLLRSAGVSDRAVLQGIQEDKESQKYHMAC 448
Query: 416 TLTFEAVHSSSCDAG-------------INHPNQYFSDSH 442
FE +H + I HPN+YF S+
Sbjct: 449 NRVFEYLHKTELKRAKEEGIFTAVQLETIVHPNEYFKRSY 488
>gi|46109914|ref|XP_382015.1| hypothetical protein FG01839.1 [Gibberella zeae PH-1]
Length = 500
Score = 267 bits (682), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 167/454 (36%), Positives = 245/454 (53%), Gaps = 40/454 (8%)
Query: 21 LPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEEMENLVRDLWKANMRHPE 80
L Y P ++ LE FE +A+DRLRVL + R K P E ++ + K ++
Sbjct: 38 LNFYTDPPTADITLEQFEQWAIDRLRVLAELEACAFRNKTPAETATHMKPILKQHLNLEA 97
Query: 81 AS-------EDVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKRALM 133
S E KD SHF+LRL + TEDLR+ F +ET L+R R + A +
Sbjct: 98 NSSSSKKLFEQRQKDHYSHFILRLAFSSTEDLRRRFTRVETMLFRLRLNEDDLSERSAFV 157
Query: 134 EEFDLP-CKAISRTEFENAKEKLEQVARSFDQPLPTADAIFYKVPFEEVPELVAGRRVYI 192
+ L C+ + TE + + E A + ++ D ++KV +E VP+L+ RRV++
Sbjct: 158 KTLGLDWCEDV--TEEDRREYAAELAAFTSNRKGENDDDTWFKVDWERVPDLIESRRVFL 215
Query: 193 HKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEALSMSYLG 252
G A+V + +V+++F S L + L LT R + R E DRLTPI+ LS +++
Sbjct: 216 KAGKAFVPGREQTGMVISEFTSRLERQLELTAR---ALPRLDEDDRLTPILNHLSKNFIT 272
Query: 253 PDYSQTKEFG-----EISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLK 307
PD S T EIS ++D L++ FP CM HL LR D HLKH GR+Q LFLK
Sbjct: 273 PDASYTSSTAAVPGAEISAANIDNLSQH-FPACMSHLHRSLRRDGHLKHFGRLQYSLFLK 331
Query: 308 GVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTD-----YTPYSCQKI 362
G+GL +E+ L FW+ F+ + ++F+KEY Y+IRH YG G ++ Y+P+SCQKI
Sbjct: 332 GIGLNLEECLVFWRKSFNN-MTDDKFNKEYRYNIRHVYGDVGGDSNRRGGGYSPFSCQKI 390
Query: 363 ISS-TPGVGDHHGCPYRHFSEENLRAALGRMGVGSRAMEDVVDKVRNRH-YQLACTLTFE 420
++ PG G+ HGCPYRHF+ ENL A + MGV R++ V + +++ + +AC FE
Sbjct: 391 LTEHPPGPGEAHGCPYRHFNLENLSALVQAMGVNDRSVLQGVKEDKDKQKFHMACNRVFE 450
Query: 421 AVHSSSC----DAG---------INHPNQYFSDS 441
+H D G I HPN+YF S
Sbjct: 451 HLHKQEIRKAKDEGVMTQSQLETIVHPNEYFKRS 484
>gi|388855830|emb|CCF50614.1| related to PRI2-DNA-directed DNA polymerase alpha , 58 KD subunit
(DNA primase) [Ustilago hordei]
Length = 545
Score = 266 bits (679), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 166/458 (36%), Positives = 247/458 (53%), Gaps = 43/458 (9%)
Query: 21 LPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEEMENLVRDLWK------- 73
L Y P EV +E FE +A+DRL+VL I + AR + E ++ V L K
Sbjct: 47 LNFYTLPPIHEVTIEQFESWAIDRLKVLAEIESSQARNRTYAETKDAVNALAKRLLPLNA 106
Query: 74 --ANMRHPEASEDVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKRA 131
AN +E V KD SHFVLRL +CR+EDLR+ F+ E+ L+R RF + + +
Sbjct: 107 NTANKTTDLLAERV-KDHASHFVLRLAFCRSEDLRRRFVKAESILFRLRFETDDATERES 165
Query: 132 LMEEFDLPCKAISRTEFENAKEKL----EQVARSFDQPLPTADAIFYKVPFEEVPELVAG 187
M +L K +S E +E+L ++A +F+ F+KV + V +LV
Sbjct: 166 FMRSLNLDWKPVSNEEKRTYREQLVATHPKMASTFES------ETFFKVDWTRVTDLVEK 219
Query: 188 RRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEALS 247
RRV++ G A+V + + SLV+ +F+S L + L +T R + R E DRL P++ LS
Sbjct: 220 RRVFMRAGQAWVPIKEQASLVLAEFQSRLLRDLEVTAR---ALPRLDEDDRLLPVLSHLS 276
Query: 248 MSYLG---PDYSQTKEFGE----ISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRM 300
M +L DYS + + ++ +D L ++ P+CM++L L HLKH GR+
Sbjct: 277 MGFLAGISTDYSGSSITADGSTIVTAGLVDALVKTHAPMCMKNLHTTLTATGHLKHYGRL 336
Query: 301 QLGLFLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQ 360
Q LFLK +GL +E+AL FW+ F + + ++F+KEY Y+IRH YG EG+R +Y SC
Sbjct: 337 QYNLFLKELGLPVEEALVFWRRSF-KNMTDDKFNKEYRYNIRHGYGLEGRRMNYPAKSCA 395
Query: 361 KIISS-TPGVGDHHGCPYRHFSEENLRAALGR-MGVGSRAMEDVVDKVRNRHYQLACTLT 418
+I++ PG D HGCP+RHFS NL AA+ + G+ +++ V+ HY +ACT
Sbjct: 396 RILTQDQPGPQDSHGCPFRHFSTTNLSAAMVQHYGLNQSEQSEILSSVKQGHYHVACTRI 455
Query: 419 FEAVH-------SSSCDA---GINHPNQYFSDSHKILQ 446
FE H D + HPN+YF S K+ Q
Sbjct: 456 FEITHQRQGVKKGQGLDGRGETVTHPNRYFESSWKLSQ 493
>gi|302511397|ref|XP_003017650.1| hypothetical protein ARB_04532 [Arthroderma benhamiae CBS 112371]
gi|291181221|gb|EFE37005.1| hypothetical protein ARB_04532 [Arthroderma benhamiae CBS 112371]
Length = 553
Score = 266 bits (679), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 169/466 (36%), Positives = 252/466 (54%), Gaps = 45/466 (9%)
Query: 21 LPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEEMENLVRDLWK------A 74
L Y P E+ LE FE +A+DRLRVL + R K P E + L K +
Sbjct: 87 LNFYEVPPTAEITLEQFEQWAIDRLRVLSELEACSYRNKTPAETAAHIAPLLKKFLPLNS 146
Query: 75 NMRHPEASEDV-----NKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAK 129
N +S+D+ KD SHF+LRL + T+DLR+ F+ +E+ L+++RF + +
Sbjct: 147 NTSLGNSSDDILQAERQKDHYSHFILRLAFASTDDLRRRFVRLESMLFKFRFQQDDARER 206
Query: 130 RALMEEFDLPCKAISRTEFENAKEKLEQVARSFDQPLPTADAIFYKVPFEEVPELVAGRR 189
R ++ L + ++ E E E + S D ++KV +E VPEL+ R
Sbjct: 207 REFVDSLHLDWETVTD---EEKAELGEALLASTPGLRWVDDESWFKVDWEAVPELIERRS 263
Query: 190 VYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEALSMS 249
+Y+ KG AYV + + +S+++ +F S L KA+ LT+R + R E DRL+PI++ LS +
Sbjct: 264 IYVKKGKAYVPLREQLSMILAEFTSRLEKAMELTSR---ALPRLDEDDRLSPILQHLSKN 320
Query: 250 YLGPDYSQTKEFGE-----ISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGL 304
+ D S ++ G I+ +D LA+ FPLCMR+L +LR++ HLKH GR+Q L
Sbjct: 321 FGTADSSYSEGEGAVPGAPINAASVDVLAQH-FPLCMRNLHMQLRKNAHLKHFGRLQYTL 379
Query: 305 FLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTD-----YTPYSC 359
FLKG+GL ++D L FW+ F + + + F+ Y Y++RH YG G + Y PYSC
Sbjct: 380 FLKGIGLSLDDCLVFWRRSF-RNITDDEFNSRYKYNVRHAYGDVGGDMNRRGRGYPPYSC 438
Query: 360 QKIIS-STPGVGDHHGCPYRHFSEENLRAALGRMGVGSR-AMEDVVDKVRNRHYQLACTL 417
QKI++ + PG G HGCPYRHFS +NL + L +G+ R + V + V Y +AC
Sbjct: 439 QKILTDNAPGTGQTHGCPYRHFSPDNLVSLLEAVGITDRETLRGVREDVGRTRYHIACNR 498
Query: 418 TFEAVHSSSC----DAG---------INHPNQYFSDSHKILQPKNN 450
FE VH + D G I HPN YF S+ +L+ NN
Sbjct: 499 VFEHVHKNELKKVKDEGIWSQTELDTIVHPNVYFKRSY-LLKNLNN 543
>gi|145229181|ref|XP_001388899.1| DNA primase large subunit [Aspergillus niger CBS 513.88]
gi|134054999|emb|CAK37007.1| unnamed protein product [Aspergillus niger]
gi|350638062|gb|EHA26418.1| hypothetical protein ASPNIDRAFT_196588 [Aspergillus niger ATCC
1015]
Length = 500
Score = 266 bits (679), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 173/470 (36%), Positives = 250/470 (53%), Gaps = 49/470 (10%)
Query: 21 LPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEEME-NLVRDLWK-----A 74
L Y P E+ LE FE +A+DRL+VL I R K P E E ++ L K +
Sbjct: 38 LNFYEVPPTDEITLEQFEQWAIDRLKVLAEIEACSYRNKSPAETEAHITPHLQKYLPLSS 97
Query: 75 NMRHPEASEDV------NKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEA 128
N + D KD SHF+LRL + TE+LR+ F+ ET L+R+RF +
Sbjct: 98 NTSSSNGAADQRLKNERQKDHYSHFILRLAFSATEELRRRFVRAETMLFRFRFQRDDTRE 157
Query: 129 KRALMEEFDLPCKAISRTEFENAKEKLEQVARSFDQPLPTADAIFYKVPFEEVPELVAGR 188
+RA +E +L + + E + E+L + + D +YKV +E+VPELV R
Sbjct: 158 RRAFIESLNLDWEPVDDEEKQRLAEQLLAASPGLRR---IDDETWYKVDWEKVPELVERR 214
Query: 189 RVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEALSM 248
V++ KG AYV + +S+++ +F + L +AL LT+R + R E DRLTPI+ LS
Sbjct: 215 AVFLSKGKAYVPGREQLSMIIAEFTARLERALELTSR---ALPRLDEDDRLTPILNHLSK 271
Query: 249 SYLGPD--YSQTKEF---GEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLG 303
++ + Y++ + F I+ ++D+L++ FPLCMR L LR+++HLKH GR+Q
Sbjct: 272 NFGSAESVYTENEGFVDGAPITANNIDRLSQH-FPLCMRSLHMNLRKNNHLKHYGRLQYT 330
Query: 304 LFLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTD-----YTPYS 358
LFLKG+GL +E+ + FW+ F + + + F+ Y Y+IRH YG G + Y PYS
Sbjct: 331 LFLKGIGLSLEECIVFWRQGF-KGLTDDEFNSRYKYNIRHAYGDVGGDQNRRGRGYPPYS 389
Query: 359 CQKIIS-STPGVGDHHGCPYRHFSEENLRAALGRMGVGSR-AMEDVVDKVRNRHYQLACT 416
CQKI+ S PGVG HGCPYRHFS +NL L GV R + V + V + +AC
Sbjct: 390 CQKILGDSNPGVGQTHGCPYRHFSVDNLIGLLQSTGVNDRDVLRGVREDVEKMRFHIACN 449
Query: 417 LTFEAVHSSSC-----DAGIN--------HPNQYFSDSHKILQ----PKN 449
FE H + D N HPN YF S+ + Q PKN
Sbjct: 450 RVFEHTHKADIKRVKEDGTWNQTDLDTIVHPNTYFKRSYLLKQMGKAPKN 499
>gi|327296970|ref|XP_003233179.1| DNA primase large subunit [Trichophyton rubrum CBS 118892]
gi|326464485|gb|EGD89938.1| DNA primase large subunit [Trichophyton rubrum CBS 118892]
Length = 504
Score = 265 bits (678), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 169/466 (36%), Positives = 250/466 (53%), Gaps = 45/466 (9%)
Query: 21 LPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEEMENLVRDLWK------A 74
L Y P E+ LE FE +A+DRLRVL + R K P E + L K +
Sbjct: 38 LNFYEVPPTAEITLEQFEQWAIDRLRVLSELEACSYRNKTPAETAAHIAPLLKKFLPLNS 97
Query: 75 NMRHPEASEDV-----NKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAK 129
N +S+D+ KD SHF+LRL + T+DLR+ F+ +E+ L+++RF + +
Sbjct: 98 NTSLGSSSDDILQAERQKDHYSHFILRLAFASTDDLRRRFVRLESMLFKFRFQQDDARER 157
Query: 130 RALMEEFDLPCKAISRTEFENAKEKLEQVARSFDQPLPTADAIFYKVPFEEVPELVAGRR 189
R ++ L + +S E E L S D ++KV + VPEL+ R
Sbjct: 158 REFVDSLHLDWETVSDEEKAELGEALLASTPSLRW---VDDESWFKVDWGAVPELIERRS 214
Query: 190 VYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEALSMS 249
+Y+ KG AYV + + +S+++ +F S L KA+ LT+R + R E DRL+PI++ LS +
Sbjct: 215 IYVKKGKAYVPLREQLSMILAEFTSRLEKAMELTSR---ALPRLDEDDRLSPILQHLSKN 271
Query: 250 YLGPDYSQTKEFGE-----ISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGL 304
+ D S ++ G I+ +D LA+ FPLCMR+L +LR++ HLKH GR+Q L
Sbjct: 272 FGTADSSYSEGEGAVPGAPINAASVDVLAQH-FPLCMRNLHMQLRKNAHLKHFGRLQYTL 330
Query: 305 FLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTD-----YTPYSC 359
FLKG+GL ++D L FW+ F + + + F+ Y Y++RH YG G + Y PYSC
Sbjct: 331 FLKGIGLSLDDCLVFWRRSF-RNITDDEFNSRYKYNVRHAYGDVGGDMNRRGRGYPPYSC 389
Query: 360 QKIIS-STPGVGDHHGCPYRHFSEENLRAALGRMGVGSR-AMEDVVDKVRNRHYQLACTL 417
QKI++ + PG G HGCPYRHFS +NL + L +G+ R + V + V Y +AC
Sbjct: 390 QKILTDNAPGTGQTHGCPYRHFSPDNLVSLLETVGITDRETLRGVREDVGRTRYHIACNR 449
Query: 418 TFEAVHSSSC----DAG---------INHPNQYFSDSHKILQPKNN 450
FE VH + D G I HPN YF S+ +L+ NN
Sbjct: 450 VFEYVHKNELKKVRDEGIWSQTELDTIVHPNVYFKRSY-LLKNLNN 494
>gi|448515193|ref|XP_003867273.1| Pri2 DNA primase [Candida orthopsilosis Co 90-125]
gi|380351612|emb|CCG21835.1| Pri2 DNA primase [Candida orthopsilosis]
Length = 515
Score = 265 bits (678), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 168/476 (35%), Positives = 251/476 (52%), Gaps = 57/476 (11%)
Query: 19 STLPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEEMENLVRDLWKANMRH 78
S L Y P E+ LE+FE +A+DRL++L I +AR +++E ++ L M
Sbjct: 34 SRLSFYDLPPNQEITLEEFEKWAIDRLKILIEIESCVARSSSQKDVELTLKPLLLKYM-- 91
Query: 79 PEASEDVNKDII--------SHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKR 130
P +S K II SHF+LRLV+CRTE+LRK F+ ET L+R R+ + ++
Sbjct: 92 PLSSNGDEKTIIQERMKDYYSHFILRLVFCRTEELRKKFIKNETILFRIRYNSMQPKEQQ 151
Query: 131 ALME--EFDLPCKAISRTE--------FENAKEKLEQVARSFDQPLPTADAI-------- 172
+E + L ISR E F + L+Q S + + D +
Sbjct: 152 EFIELNSYKLSWSYISREEKSELIDKFFAASCSMLKQHYASDGETSLSNDQVKQLMINKE 211
Query: 173 -FYKVPFEEVPELVAGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTI 231
F K+PFE++ +LV+ R VY+ GHAY+ +L+V +F+ NL+ LI T + +
Sbjct: 212 NFIKLPFEKLSQLVSTRSVYLQAGHAYLPTSLQSNLLVAEFQENLNDVLIKT---FQAIP 268
Query: 232 REQERDRLTPIVEALSMSYLGPDYSQTKEFGEISIKDLDQLARSS------FPLCMRHLF 285
R +E DRL P++ LS ++ Y +F D++ L+ +S +PLC HL
Sbjct: 269 RLEEDDRLLPLLNHLSRNFSNFQYE--TDFNSELASDINALSITSKQIMAHYPLCATHLQ 326
Query: 286 DKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWKAEFSQ--KVGAERFDKEYAYSIRH 343
L HLK+ GR QLG+FLKG+GL +++A+ FW +F++ + E F+K Y Y+IRH
Sbjct: 327 RNLMATSHLKYLGRQQLGVFLKGIGLNVDEAIKFWTQQFTKNGNMTQETFNKNYKYNIRH 386
Query: 344 NYGKEGKRTDYTPYSCQKIISS-TPGVGDHHGCPYRHFSEENLRAALGRMGVGSRA-MED 401
YG EG R +Y P+ C I+S PG ++HGCPYR +SE LR +L MG+ ++ M
Sbjct: 387 QYGLEGARINYRPWDCATILSKPKPGPKEYHGCPYRDYSEPQLRTSLEEMGIKNQQDMNS 446
Query: 402 VVDKVRNRHYQLACTLTFEAV-------------HSSSCDAGINHPNQYFSDSHKI 444
++D V N Y +ACT FE HS+ INHPN YF S ++
Sbjct: 447 IMDNVNNHDYTIACTKVFELTHQKEIMNAAKGQGHSTPQLEHINHPNLYFDRSRQL 502
>gi|451852578|gb|EMD65873.1| hypothetical protein COCSADRAFT_35846 [Cochliobolus sativus ND90Pr]
Length = 504
Score = 265 bits (678), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 170/466 (36%), Positives = 244/466 (52%), Gaps = 42/466 (9%)
Query: 21 LPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEEMENLVRDLWKANM---- 76
L Y P E+ LE+FE +A++RL+VL + R K PEE ++ + +
Sbjct: 38 LNFYVLPPTAEITLEEFETWAINRLKVLSELEACSFRNKSPEETAEYMKSILDKYLPLRS 97
Query: 77 ---RHPEASEDVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKRALM 133
R + E+ +D SHF+LRL + TEDLR+ F +ET L+ RF ++ +
Sbjct: 98 DSSRSQKLQEERRRDHYSHFILRLAFSSTEDLRRRFSRLETMLFALRFKDDDIRERQDFV 157
Query: 134 EEFDLPCKAISRTEFENAKEKLEQVARSFDQPLPTADAIFYKVPFEEVPELVAGRRVYIH 193
+L + + E+ K +L+ + T D ++KV +E VPELVA R++ +
Sbjct: 158 RSLNLEWEEVK----EDEKRELKDDLHAASGIKKTEDQEWFKVDWERVPELVAQRKILLR 213
Query: 194 KGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEALSMSYLGP 253
+G AYV + +SLVV +F L +AL LT R + R E DRL PI+ LS S+ P
Sbjct: 214 RGMAYVPQREQMSLVVAEFTKKLDEALELTAR---ALPRLDEDDRLAPILAHLSQSFTAP 270
Query: 254 D--YSQTKE----FGEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLK 307
D YS + I+ +D L+++ FPLCMR+L LRE+ HLKH GR+Q LFLK
Sbjct: 271 DAAYSTSDADINGLSTITANSIDTLSQN-FPLCMRNLHMTLRENSHLKHYGRLQYTLFLK 329
Query: 308 GVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTD-----YTPYSCQKI 362
G+GL +++ L FW+ F + + E+F KEY Y+IRH YG G + YTPYSCQK+
Sbjct: 330 GIGLSLDECLVFWRRSF-KLITDEKFQKEYKYNIRHAYGDVGGDANRRGRGYTPYSCQKL 388
Query: 363 ISS-TPGVGDHHGCPYRHFSEENLRAALGRMGVGSR-AMEDVVDKVRNRHYQLACTLTFE 420
++ PG G HGCPYR F+ +NL L R+GV R ++ V + V + Y +AC FE
Sbjct: 389 LTEPLPGPGQSHGCPYRTFTPDNLLTLLQRVGVNDRDILKTVKEDVVKQRYHVACNRVFE 448
Query: 421 AVHSSSC----DAG---------INHPNQYFSDSHKILQPKNNNAA 453
H D G I HPN YF S + NA
Sbjct: 449 WSHKKEIKKVKDDGSWSNNDLDTIVHPNTYFKRSWLLKHLGEGNAG 494
>gi|146414850|ref|XP_001483395.1| hypothetical protein PGUG_04124 [Meyerozyma guilliermondii ATCC
6260]
Length = 492
Score = 265 bits (678), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 165/480 (34%), Positives = 246/480 (51%), Gaps = 46/480 (9%)
Query: 10 RTNTPNDSVSTLPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEEMENLVR 69
R + PN +S Y P E+ LE FE +A+DRL++L I +ARG+ E E VR
Sbjct: 22 RNDLPNHRLS---FYDVPPTEEITLEQFESWAIDRLKILIEIESCMARGRSFRETETAVR 78
Query: 70 DL---------WKANMRHPEASEDVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYR 120
L W N + +++ KD SHF+LRLV+CRTEDLR+ F+ ET L++ R
Sbjct: 79 PLLQKLLPLGTWPVN--NNSQIDELKKDYYSHFILRLVFCRTEDLRRKFVRNETVLFKIR 136
Query: 121 F-LLGSSEAKRALMEEFD-LPCKAISRTE--------FENAKEKLEQVARSFDQPLPTAD 170
+ + E + + D LP I E F ++ + T D
Sbjct: 137 YNAMQPKEQHQFITNHHDKLPWNYIDSDEKLALFDQLFAATGATVKSALAAESDGQITTD 196
Query: 171 AI--------FYKVPFEEVPELVAGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALIL 222
+ F KVPFE++ LVA R V + G+ YV +SL+ +F+ L + L+
Sbjct: 197 QLRAHFRNENFIKVPFEKITSLVATRLVLLKLGYGYVPSTLQLSLLALEFQELLQRDLL- 255
Query: 223 TNRKWTSTIREQERDRLTPIVEALSMSYLGPDYSQTKEFGEISIKDLDQLARSS------ 276
R + S R +E DRL P++ L ++ +Y + D++ + ++
Sbjct: 256 --RTFQSIPRLEEDDRLLPLLNHLGQNFASMEYDPAFSADPSLVSDINAASVTTPAITNH 313
Query: 277 FPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWKAEFS---QKVGAERF 333
+PLC +HL + HL+H GR QL LFLKG+GL +++AL FW F+ + ERF
Sbjct: 314 YPLCAKHLQTNMIASSHLRHEGRQQLSLFLKGIGLSVDEALKFWSHSFTSGPHAMTPERF 373
Query: 334 DKEYAYSIRHNYGKEGKRTDYTPYSCQKII-SSTPGVGDHHGCPYRHFSEENLRAALGRM 392
+KE+ Y+IRH YG EG RT+Y P+ C +I+ PG ++HGCPYR S + L LG M
Sbjct: 374 NKEFKYNIRHTYGLEGARTNYKPWDCARILLRPLPGKNEYHGCPYRDLSVDALTTQLGEM 433
Query: 393 GVGSRAMEDVVDKVRNRHYQLACTLTFEAVHSSSCDAGINHPNQYFSDSHKILQPKNNNA 452
GVG+ M+ V++ V + Y +ACT FE H+ + I HPN YF S ++ + K A
Sbjct: 434 GVGAVDMKGVLNDVERKDYTVACTRVFEITHNVQAEH-IGHPNLYFDRSRQLERAKTETA 492
>gi|326476342|gb|EGE00352.1| DNA primase large subunit [Trichophyton tonsurans CBS 112818]
gi|326481189|gb|EGE05199.1| DNA primase large subunit [Trichophyton equinum CBS 127.97]
Length = 504
Score = 265 bits (678), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 168/466 (36%), Positives = 250/466 (53%), Gaps = 45/466 (9%)
Query: 21 LPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEEMENLVRDLWK------A 74
L Y P E+ LE FE +A+DRLRVL + R K P E + L K +
Sbjct: 38 LNFYEVPPTAEITLEQFEQWAIDRLRVLSELEACSYRNKTPAETAAHIAPLLKKFLPLNS 97
Query: 75 NMRHPEASEDV-----NKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAK 129
N +S+D+ KD SHF+LRL + T+DLR+ F+ +E+ L+++RF + +
Sbjct: 98 NTSLGSSSDDILQAERQKDHYSHFILRLAFASTDDLRRRFVRLESMLFKFRFQQDDARER 157
Query: 130 RALMEEFDLPCKAISRTEFENAKEKLEQVARSFDQPLPTADAIFYKVPFEEVPELVAGRR 189
R ++ L + ++ E E L D ++KV +E VPEL+ R
Sbjct: 158 REFVDSLHLDWETVTDEEKAELGEALLASTPGLRW---VDDESWFKVNWEAVPELIERRS 214
Query: 190 VYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEALSMS 249
+Y+ KG AYV + + +S+++ +F S L KA+ LT+R + R E DRL+PI++ LS +
Sbjct: 215 IYVRKGKAYVPLREQLSMILAEFTSRLEKAMELTSR---ALPRLDEDDRLSPILQHLSKN 271
Query: 250 YLGPDYSQTKEFGE-----ISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGL 304
+ D S ++ G I+ +D LA+ FPLCMR+L +LR++ HLKH GR+Q L
Sbjct: 272 FGTADSSYSEGEGAVPGAPINAASVDVLAQH-FPLCMRNLHMQLRKNAHLKHFGRLQYTL 330
Query: 305 FLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTD-----YTPYSC 359
FLKG+GL ++D L FW+ F + + + F+ Y Y++RH YG G + Y PYSC
Sbjct: 331 FLKGIGLSLDDCLVFWRRSF-RNITDDEFNSRYKYNVRHAYGDVGGDMNRRGRGYPPYSC 389
Query: 360 QKIIS-STPGVGDHHGCPYRHFSEENLRAALGRMGVGSR-AMEDVVDKVRNRHYQLACTL 417
QKI++ + PG G HGCPYRHFS +NL + L +G+ R + V + V Y +AC
Sbjct: 390 QKILTDNAPGTGQTHGCPYRHFSPDNLVSLLETVGITDRETLRGVREDVGRTRYHIACNR 449
Query: 418 TFEAVHSSSC----DAG---------INHPNQYFSDSHKILQPKNN 450
FE VH + D G I HPN YF S+ +L+ NN
Sbjct: 450 VFEHVHKNELKKVRDEGIWSQTDLDTIVHPNVYFKRSY-LLKNLNN 494
>gi|302661266|ref|XP_003022302.1| hypothetical protein TRV_03513 [Trichophyton verrucosum HKI 0517]
gi|291186242|gb|EFE41684.1| hypothetical protein TRV_03513 [Trichophyton verrucosum HKI 0517]
Length = 550
Score = 265 bits (678), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 169/466 (36%), Positives = 252/466 (54%), Gaps = 45/466 (9%)
Query: 21 LPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEEMENLVRDLWK------A 74
L Y P E+ LE FE +A+DRLRVL + R K P E + L K +
Sbjct: 84 LNFYEVPPTAEITLEQFEQWAIDRLRVLSELEACSYRNKTPAETAAHIAPLLKKFLPLNS 143
Query: 75 NMRHPEASEDV-----NKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAK 129
N +S+D+ KD SHF+LRL + T+DLR+ F+ +E+ L+++RF + +
Sbjct: 144 NTSLGSSSDDILQAERQKDHYSHFILRLAFASTDDLRRRFVRLESMLFKFRFQQDDARER 203
Query: 130 RALMEEFDLPCKAISRTEFENAKEKLEQVARSFDQPLPTADAIFYKVPFEEVPELVAGRR 189
R ++ L + ++ E E E + S D ++KV +E VPEL+ R
Sbjct: 204 REFVDSLHLDWETVTD---EEKAELGEALLASTPGLRWVDDESWFKVDWEAVPELIERRS 260
Query: 190 VYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEALSMS 249
+Y+ KG AYV + + +S+++ +F S L KA+ LT+R + R E DRL+PI++ LS +
Sbjct: 261 IYVKKGKAYVPLREQLSMILAEFTSRLEKAMELTSR---ALPRLDEDDRLSPILQHLSKN 317
Query: 250 YLGPDYSQTKEFGE-----ISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGL 304
+ D S ++ G I+ +D LA+ FPLCMR+L +LR++ HLKH GR+Q L
Sbjct: 318 FGTADSSYSEGEGAVPGAPINAASVDVLAQH-FPLCMRNLHMQLRKNAHLKHFGRLQYTL 376
Query: 305 FLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTD-----YTPYSC 359
FLKG+GL ++D L FW+ F + + + F+ Y Y++RH YG G + Y PYSC
Sbjct: 377 FLKGIGLSLDDCLVFWRRSF-RNITDDEFNSRYKYNVRHAYGDVGGDMNRRGRGYPPYSC 435
Query: 360 QKIIS-STPGVGDHHGCPYRHFSEENLRAALGRMGVGSR-AMEDVVDKVRNRHYQLACTL 417
QKI++ + PG G HGCPYRHFS +NL + L +G+ R + V + V Y +AC
Sbjct: 436 QKILTDNAPGTGQTHGCPYRHFSPDNLVSLLEAVGITDRETLRGVREDVGRTRYHIACNR 495
Query: 418 TFEAVHSSSC----DAG---------INHPNQYFSDSHKILQPKNN 450
FE VH + D G I HPN YF S+ +L+ NN
Sbjct: 496 VFEHVHKNELKKVRDEGIWSQTELDTIVHPNVYFKRSY-LLKNLNN 540
>gi|443896755|dbj|GAC74098.1| eukaryotic-type DNA primase, large subunit [Pseudozyma antarctica
T-34]
Length = 544
Score = 265 bits (678), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 162/464 (34%), Positives = 247/464 (53%), Gaps = 41/464 (8%)
Query: 21 LPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALAR----GKRPEEMENLVRDLWKANM 76
L Y P EV +E FE +A+DRL+VL I + AR G+ + + L + L N
Sbjct: 48 LNFYTLPPIHEVTIEHFESWAIDRLKVLAEIESSQARNRTYGETKDAVNALAKRLLPLNA 107
Query: 77 RHPEASEDVN----KDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKRAL 132
+ D+ KD +SHFVLRL +CR+EDLR+ F+ E+ L+R RF + + +
Sbjct: 108 NTANKTADLLAERLKDHVSHFVLRLAFCRSEDLRRRFVKAESLLFRLRFETDDASERESF 167
Query: 133 MEEFDLPCKAISRTEFENAKEKL----EQVARSFDQPLPTADAIFYKVPFEEVPELVAGR 188
M +L +S E +E+L ++A +FD F+KV + V +LV R
Sbjct: 168 MRSLNLDWNPVSNEEKNQYREQLVATHPKMASTFDS------ETFFKVDWTRVTDLVEKR 221
Query: 189 RVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEALSM 248
RV++ G A+V + + SLV+ +F+S L + L +T R + R E DRL P++ LSM
Sbjct: 222 RVFMRAGQAWVPIKEQSSLVLAEFQSRLMRDLEMTAR---ALPRLDEDDRLLPVLSHLSM 278
Query: 249 SYLG---PDYSQTKEFGE----ISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQ 301
+L DY+ + + ++ +D L ++ PLCM++L L HLKH GR+Q
Sbjct: 279 GFLAGISTDYTGSSITADGTTTVTAGMVDALVKTHAPLCMKNLHSTLTATGHLKHYGRLQ 338
Query: 302 LGLFLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQK 361
LFLK +GL +E+AL FW+ F + + ++F+KEY Y+IRH YG EG+R +Y SC +
Sbjct: 339 YNLFLKELGLPVEEALVFWRRSF-KHITDDKFNKEYRYNIRHGYGLEGRRMNYPAKSCAR 397
Query: 362 IISS-TPGVGDHHGCPYRHFSEENLRAALGR-MGVGSRAMEDVVDKVRNRHYQLACTLTF 419
I++ PG D HGCP+RHFS NL +A+ + G+ +++ V+ HY +ACT F
Sbjct: 398 ILTQDQPGPQDSHGCPFRHFSTTNLSSAMVQHYGLSPAEQSEILASVKQGHYHVACTRIF 457
Query: 420 EAVHSSSC----------DAGINHPNQYFSDSHKILQPKNNNAA 453
E H + HPN+YF S K+ Q + A
Sbjct: 458 EITHQKQGVKKGQGLDGRGETVTHPNRYFESSWKLAQAEGGADA 501
>gi|367004897|ref|XP_003687181.1| hypothetical protein TPHA_0I02440 [Tetrapisispora phaffii CBS 4417]
gi|357525484|emb|CCE64747.1| hypothetical protein TPHA_0I02440 [Tetrapisispora phaffii CBS 4417]
Length = 513
Score = 265 bits (677), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 158/453 (34%), Positives = 253/453 (55%), Gaps = 34/453 (7%)
Query: 21 LPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEEMENLVRDLWKANMR-HP 79
+ Y PQ E+ L FE +A+DRL++L I ++R K +E+E++++ ++ + +
Sbjct: 52 VSFYELPPQGEITLHQFETWAIDRLKILLEIESCISRNKSLKEIESIIKPQFQKLLPFNT 111
Query: 80 EASEDVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKRALMEEFDLP 139
+ ED KD SH++LRL +CR+++LR F+ E L++ R+ + ++ K ++ +LP
Sbjct: 112 DNFEDRKKDYYSHYILRLCFCRSKELRDKFVRSEVLLFKIRYEMLTTVDKSKFVKSLNLP 171
Query: 140 C-KAISRTEFEN-AKEKLEQVARSFDQPLPTAD----------AIFYKVPFEEVPELVAG 187
+ IS E +KE +A S L D F K+PFE V +LV
Sbjct: 172 LLRYISDEEKAKFSKELYNTIAPSLQFQLNITDDQQKRQYLQQEKFIKLPFENVIDLVGS 231
Query: 188 RRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEALS 247
R+V++ G+AY+ Q ++L+ ++F NL + LI R + R E DRL PI++ LS
Sbjct: 232 RQVFLKDGYAYLPQFQQLNLLTSEFSKNLMEDLI---RTYQYLPRLNEDDRLVPILQHLS 288
Query: 248 MSYL-----GPDYSQTK-EFGEISIKDL--DQLARSSFPLCMRHLFDKLREDHHLKHGGR 299
Y G DY+ T+ + +I+ + + D + R FPLC ++L L+E HHL++ GR
Sbjct: 289 SGYTISDFKGDDYTSTENQNNDINNRSVNTDDIQRH-FPLCAKNLMYGLKEHHHLRYNGR 347
Query: 300 MQLGLFLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSC 359
QL FLKG+GL ++A+ FW F+ +V ++F+KEY Y+ RHNYG EG R +Y P+ C
Sbjct: 348 QQLSFFLKGIGLSCDEAMQFWTEAFAGRVSIDKFNKEYRYNFRHNYGLEGNRINYKPWDC 407
Query: 360 QKIISST-PGVGDHHGCPYRHFSEENLRAALGRMGVGSRAMEDVVDKVRNRHYQLACTLT 418
+ I+S P G++HGCPYR ++ + L + L +M + + + V+D Y +ACT
Sbjct: 408 RTILSKPRPARGEYHGCPYRDWNPDRLTSELKKMDLSQQQIVSVLDFCAKNEYTIACTKV 467
Query: 419 FEAVHSSSCD--------AGINHPNQYFSDSHK 443
FEA HSS+ I+HPN YF S K
Sbjct: 468 FEASHSSNDSVSDSVDDMTHISHPNLYFERSRK 500
>gi|343424927|emb|CBQ68465.1| related to PRI2-DNA-directed DNA polymerase alpha , 58 KD subunit
(DNA primase) [Sporisorium reilianum SRZ2]
Length = 547
Score = 265 bits (677), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 163/457 (35%), Positives = 248/457 (54%), Gaps = 41/457 (8%)
Query: 21 LPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALAR----GKRPEEMENLVRDLWKANM 76
L Y P EV +E FE +A+DRL+VL I + AR G+ + + L + L N
Sbjct: 48 LNFYTVPPIHEVTIEQFESWAIDRLKVLAEIESSQARNRTYGETKDAVNALAKRLLPLNA 107
Query: 77 RHPEASEDVN----KDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKRAL 132
+ D+ KD +SHFVLRL +CR+EDLR+ F+ E+ L+R RF + + +
Sbjct: 108 NTAIKTTDLLAERLKDHVSHFVLRLAFCRSEDLRRRFVKAESLLFRLRFETDDATERESF 167
Query: 133 MEEFDLPCKAISRTEFENAKEKL----EQVARSFDQPLPTADAIFYKVPFEEVPELVAGR 188
M +L K +S E + +E+L ++A +F+ F+KV + V +LV R
Sbjct: 168 MRSLNLDWKPVSAEEKRSYREQLVATHPKMASTFE------SETFFKVDWTRVTDLVEKR 221
Query: 189 RVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEALSM 248
RV++ G A+V + + SLV+ +F+S L + L +T R + R E DRL P++ LSM
Sbjct: 222 RVFMQAGQAWVPIKEQSSLVLAEFQSRLLRDLEMTAR---ALPRLDEDDRLLPVLSHLSM 278
Query: 249 SYLG---PDYSQTKEFGE----ISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQ 301
+L DY+ + + ++ +D L ++ PLCM++L L HLKH GR+Q
Sbjct: 279 GFLAGISTDYTGSSITADGTTTVTAGMVDALVKTHAPLCMKNLHTTLTATGHLKHYGRLQ 338
Query: 302 LGLFLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQK 361
LFLK +GL +E+AL FW+ F + + ++F+KEY Y+IRH YG EG+R +Y SC +
Sbjct: 339 YNLFLKELGLPVEEALVFWRRSF-KNMTDDKFNKEYRYNIRHGYGLEGRRMNYPAKSCAR 397
Query: 362 IISS-TPGVGDHHGCPYRHFSEENLRAALGR-MGVGSRAMEDVVDKVRNRHYQLACTLTF 419
I++ PG D HGCP+RHFS NL AA+ + G+ +++ V+ HY +ACT F
Sbjct: 398 ILTQDQPGPQDSHGCPFRHFSTTNLSAAMVQHYGLNQADQSEILASVKQGHYHVACTRIF 457
Query: 420 EAVH-------SSSCDA---GINHPNQYFSDSHKILQ 446
E H D + HPN+YF S K+ Q
Sbjct: 458 EITHQRHGVKKGQGLDGRGETVTHPNRYFESSWKLSQ 494
>gi|115388433|ref|XP_001211722.1| hypothetical protein ATEG_02544 [Aspergillus terreus NIH2624]
gi|114195806|gb|EAU37506.1| hypothetical protein ATEG_02544 [Aspergillus terreus NIH2624]
Length = 500
Score = 265 bits (676), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 172/463 (37%), Positives = 241/463 (52%), Gaps = 45/463 (9%)
Query: 21 LPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEEMENLVRDLWK------A 74
L Y P E+ LE FE +A+DRL+VL I R K + E+ ++ L + +
Sbjct: 38 LNFYDVPPTAEITLEQFEQWAIDRLKVLAEIEACSYRNKSASDTEDHIKPLLQKYLPLSS 97
Query: 75 NMRHPEAS------EDVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEA 128
N A + KD SHF+LRL + TEDLR+ F ET L+R+RF S
Sbjct: 98 NTSASSAGGEQRLKNERQKDHYSHFILRLAFSATEDLRRRFARAETMLFRFRFQRDDSRE 157
Query: 129 KRALMEEFDLPCKAISRTEFENAKEKLEQVARSFDQPLPTADAIFYKVPFEEVPELVAGR 188
+RA +E +L + +S E + + L + D ++YKV +E VPELV R
Sbjct: 158 RRAFIESLNLDWEPVSEEERRHLEGDLLSATPGLRS---SKDELWYKVDWERVPELVERR 214
Query: 189 RVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEALSM 248
V++ KG AYV + S++V +F S L +AL LT+R + R E DRLTPI+ LS
Sbjct: 215 AVFLSKGKAYVPAREQQSMIVAEFTSRLERALELTSR---ALPRLDEDDRLTPILNHLSK 271
Query: 249 SYLGPD--YSQTKEF---GEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLG 303
++ + YS+ + F I+ +D L++ FPLCMR L LR+++HLKH GR+Q
Sbjct: 272 NFGSAESVYSEGEGFVDGAPITASSIDHLSQH-FPLCMRSLHMSLRKNNHLKHYGRLQYT 330
Query: 304 LFLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTD-----YTPYS 358
LFLKG+GL +E+ + FW+ F E F+ Y Y++RH YG G + Y PYS
Sbjct: 331 LFLKGIGLSLEECILFWRQSFKGFTDDE-FNSRYKYNVRHAYGDVGGDVNRRGRGYPPYS 389
Query: 359 CQKIIS-STPGVGDHHGCPYRHFSEENLRAALGRMGVGSR-AMEDVVDKVRNRHYQLACT 416
CQKI++ S PGVG HGCPYRHFS +NL L GV + + V + V Y +AC
Sbjct: 390 CQKILNDSNPGVGQTHGCPYRHFSPDNLIGLLQSTGVHDKEVLRGVREDVEKTRYHIACN 449
Query: 417 LTFEAVHSSSC-----DAGIN--------HPNQYFSDSHKILQ 446
FE H + D N HPN YF S+ + Q
Sbjct: 450 RVFEWAHKAEIKKVKEDGTWNQTDLDTIVHPNTYFKRSYLLKQ 492
>gi|340516185|gb|EGR46435.1| predicted protein [Trichoderma reesei QM6a]
Length = 501
Score = 264 bits (675), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 169/456 (37%), Positives = 247/456 (54%), Gaps = 41/456 (8%)
Query: 21 LPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEEMENLVRDLWKANMRHPE 80
L Y AP ++ LE FE +A+DRLRVL + R + P E + ++ + +
Sbjct: 38 LNFYADAPTADITLEQFEQWAIDRLRVLAELEACSFRNRSPAETASHMKPILDKYLPLDS 97
Query: 81 ASEDV--------NKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKRAL 132
S KD SHF+LRL + TEDLR+ F +ET L+R RF + + A
Sbjct: 98 NSSSNAKLLFSQRQKDHYSHFILRLAFSSTEDLRRRFARVETMLFRLRFNSDDLKERAAF 157
Query: 133 MEEFDLPC-KAISRTEFENAKEKLEQVARSFDQPLPTADAIFYKVPFEEVPELVAGRRVY 191
+ DL + ++ E +LE + + + D ++KV +E VP+LV RRV+
Sbjct: 158 VSSLDLDWWEPVTDDEKRRYGAELEAMVSG--KKTSSEDETWFKVDWERVPDLVESRRVF 215
Query: 192 IHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEALSMSYL 251
+ G AYV + S+VV +F S L + L LT R + R E DRLTPI+ LS +++
Sbjct: 216 LKAGKAYVPGREQSSMVVAEFTSRLERQLELTAR---ALPRLDEDDRLTPILNHLSKNFI 272
Query: 252 GPDYS----QTKEFG-EISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFL 306
PD S T G +IS ++D L++ FP CM +L LR D HLKH GR+Q LFL
Sbjct: 273 TPDASYISGSTAPAGAQISAANIDNLSQH-FPACMSNLHRSLRRDAHLKHYGRLQYTLFL 331
Query: 307 KGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTD-----YTPYSCQK 361
KG+GL +E+ LAFW+ F KV + F+KEY Y+IRH YG G ++ Y+P+SCQK
Sbjct: 332 KGIGLNLEECLAFWRGAF-HKVTDDTFNKEYRYNIRHAYGDVGGDSNRRGGGYSPFSCQK 390
Query: 362 IISS-TPGVGDHHGCPYRHFSEENLRAALGRMGVGSRA-MEDVVDKVRNRHYQLACTLTF 419
I++ PG G+ HGCPYRHF+ ENL + + MGV R+ ++ + + N+ + +AC F
Sbjct: 391 ILTEHPPGPGEAHGCPYRHFNLENLTSLVQAMGVTDRSVLQGIKEDKDNQKFHMACNRVF 450
Query: 420 EAVHSSSC----DAG---------INHPNQYFSDSH 442
+ +H + D G I HPN+YF S+
Sbjct: 451 DHLHKAEIKKAKDEGVMTANQLETIVHPNEYFKRSY 486
>gi|296811462|ref|XP_002846069.1| DNA primase large subunit [Arthroderma otae CBS 113480]
gi|238843457|gb|EEQ33119.1| DNA primase large subunit [Arthroderma otae CBS 113480]
Length = 504
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 168/466 (36%), Positives = 249/466 (53%), Gaps = 45/466 (9%)
Query: 21 LPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEEMENLVRDLWK------A 74
L Y P E+ LE FE +A+DRLRVL + R K P E + L K +
Sbjct: 38 LNFYEVPPTAEITLEQFEQWAIDRLRVLSELEACSYRNKSPAETAAHIAPLLKKFLPLSS 97
Query: 75 NMRHPEASEDV-----NKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAK 129
N S+DV KD SHF+LRL + T+DLR+ F+ +E+ L+++RF + +
Sbjct: 98 NTSLGTGSDDVLQVERQKDHYSHFILRLAFASTDDLRRRFIRLESMLFKFRFQQDDARER 157
Query: 130 RALMEEFDLPCKAISRTEFENAKEKLEQVARSFDQPLPTADAIFYKVPFEEVPELVAGRR 189
R ++ L + ++ E E E + S D ++KV +E VPEL+ R
Sbjct: 158 REFVDSLHLNWETVTD---EEKAELGEALLASTPGVRWVDDESWFKVDWEAVPELIERRS 214
Query: 190 VYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEALSMS 249
+Y+ KG AYV + + +S+++ +F + L KA+ LT+R + R E DRL+PI+ LS +
Sbjct: 215 IYVKKGKAYVPLREQLSMILAEFTARLEKAMELTSR---ALPRLDEDDRLSPILTHLSKN 271
Query: 250 YLGPDYSQTKEFGE-----ISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGL 304
+ D S ++ G I+ +D L++ FPLCMR+L +LR++ HLKH GR+Q L
Sbjct: 272 FGTADSSYSEGEGAVPGAPINAASIDVLSQH-FPLCMRNLHMQLRKNAHLKHFGRLQYTL 330
Query: 305 FLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTD-----YTPYSC 359
FLKG+GL ++D L FW+ F + + + F+ Y Y++RH YG G + Y PYSC
Sbjct: 331 FLKGIGLTLDDCLVFWRRSF-RNLTDDEFNSRYKYNVRHAYGDVGGDINRRGRGYPPYSC 389
Query: 360 QKIIS-STPGVGDHHGCPYRHFSEENLRAALGRMGV-GSRAMEDVVDKVRNRHYQLACTL 417
QKI++ + PG G HGCPYRHFS +NL + L +G+ + V D V Y +AC
Sbjct: 390 QKILTDNAPGTGQTHGCPYRHFSPDNLISLLETVGITDGETLRGVRDDVSRTRYHIACNR 449
Query: 418 TFEAVHSSSC----DAG---------INHPNQYFSDSHKILQPKNN 450
FE VH + D G I HPN YF S+ +L+ NN
Sbjct: 450 VFEHVHKNELKKVRDEGIWSQTDLDTIVHPNVYFKRSY-LLKNLNN 494
>gi|358382011|gb|EHK19685.1| hypothetical protein TRIVIDRAFT_209932 [Trichoderma virens Gv29-8]
Length = 500
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 168/454 (37%), Positives = 244/454 (53%), Gaps = 38/454 (8%)
Query: 21 LPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEEMENLVRDLWKANM---- 76
L Y AP ++ LE FE +A+DRLRVL + R + P E + ++ + +
Sbjct: 38 LNFYADAPTADITLEQFEQWAIDRLRVLAELEACSFRNRSPTETASHMKPILDKYLPLDS 97
Query: 77 ---RHPEASEDVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKRALM 133
+ + + KD SHF+LRL + TEDLR+ F +ET L+R RF + A +
Sbjct: 98 NSSSNTKLASQRQKDHYSHFILRLAFSSTEDLRRRFSRVETMLFRMRFNSDDLNERSAFV 157
Query: 134 EEFDLPCKAISRTEFENAKEKLEQVARSFDQPLPTADAIFYKVPFEEVPELVAGRRVYIH 193
+ DL TE E + E A + + + ++KV +E VP+LV R+V++
Sbjct: 158 SDLDLDWWE-PVTEDEKMRYGAELAAMAGGKRGSSEVETWFKVDWERVPDLVESRKVFLK 216
Query: 194 KGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEALSMSYLGP 253
G AYV + S+VV +F S L + L LT R + R E DRLTPI+ LS +++ P
Sbjct: 217 AGKAYVPGREQSSMVVAEFTSRLERQLELTAR---ALPRLDEDDRLTPILNHLSKNFITP 273
Query: 254 DY-----SQTKEFGEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKG 308
D S +IS ++D L++ FP CM +L LR D HLKH GR+Q LFLKG
Sbjct: 274 DSAYMSGSTAPTGAQISAANIDNLSQH-FPACMSNLHRSLRRDAHLKHYGRLQYTLFLKG 332
Query: 309 VGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTD-----YTPYSCQKII 363
+GL +E+ LAFW+ F KV + F+KEY Y+IRH YG G T+ +P+SCQKI+
Sbjct: 333 IGLNLEECLAFWRGAF-HKVTDDTFNKEYRYNIRHAYGDVGGDTNRRGGGCSPFSCQKIL 391
Query: 364 SS-TPGVGDHHGCPYRHFSEENLRAALGRMGVGSRA-MEDVVDKVRNRHYQLACTLTFEA 421
+ PG G+ HGCPYRHF+ ENL + + MGV R+ ++ V + N+ + +AC FE
Sbjct: 392 TEHPPGPGEAHGCPYRHFNLENLTSLVQAMGVSDRSVLQGVKEDKDNQKFHMACNRVFEH 451
Query: 422 VHSSSC----DAG---------INHPNQYFSDSH 442
+H + D G I HPN+YF S+
Sbjct: 452 LHKAEIKKAKDEGVMTSNQLETIVHPNEYFKRSY 485
>gi|354547139|emb|CCE43872.1| hypothetical protein CPAR2_500980 [Candida parapsilosis]
Length = 516
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 167/474 (35%), Positives = 252/474 (53%), Gaps = 53/474 (11%)
Query: 19 STLPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEEMENLVRDLWKANM-R 77
S L Y P E+ LE+FE +A+DRL++L I +AR +++E ++ L M
Sbjct: 35 SRLSFYDLPPNQEITLEEFEKWAIDRLKILIEIESCVARSSSQKDVELALKPLLLKYMPL 94
Query: 78 HPEASEDV-----NKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKRAL 132
P E KD SHF+LRLV+CRTE+LRK F+ ET L+R R+ + ++
Sbjct: 95 SPHGDEKTVMQERMKDYYSHFILRLVFCRTEELRKKFIKNETILFRIRYNSMQPKEQQEF 154
Query: 133 ME--EFDLPCKAISRTE--------FENAKEKLEQVARSFDQPLPTADAI---------F 173
+E + L ISR E F + L+Q S + T D + F
Sbjct: 155 IELNSYKLSWSYISREEKTELIDKLFAASCSMLKQHYASDGETNLTNDQVKQLMINKENF 214
Query: 174 YKVPFEEVPELVAGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIRE 233
K+PFE++ +LV+ R VY+ G+AY+ +L+V +F+ NL+ LI T + + R
Sbjct: 215 IKLPFEKLCQLVSSRSVYLQGGYAYLPTSLQSNLLVAEFQENLNDILIKT---FQAIPRL 271
Query: 234 QERDRLTPIVEALSMSYLGPDYSQTKEFGEISIKDLDQLARSS------FPLCMRHLFDK 287
+E DRL P++ LS ++ Y +T E++ D++ L+ +S +PLC HL
Sbjct: 272 EEDDRLLPLLNHLSRNFSNFQY-ETDINSELA-SDINALSITSKQIMAHYPLCATHLQRN 329
Query: 288 LREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWKAEFSQ--KVGAERFDKEYAYSIRHNY 345
L HLK+ GR QLG+FLKG+GL +++A+ FW +F++ + E F+K Y Y+IRH Y
Sbjct: 330 LMATSHLKYLGRQQLGIFLKGIGLNVDEAVKFWAQQFTKNGNMTQETFNKNYKYNIRHQY 389
Query: 346 GKEGKRTDYTPYSCQKIISS-TPGVGDHHGCPYRHFSEENLRAALGRMGVGSRA-MEDVV 403
G EG R +Y P+ C I+S PG ++HGCPYR +SE LR++L MG+ ++ M ++
Sbjct: 390 GLEGARINYRPWDCATILSKPKPGPKEYHGCPYRDYSEPQLRSSLEEMGIKNQQDMNSIM 449
Query: 404 DKVRNRHYQLACTLTFEAVHSSSCDAG-------------INHPNQYFSDSHKI 444
D V N Y +ACT FE H + INHPN YF S ++
Sbjct: 450 DNVNNHDYTIACTKVFELTHQKEIMSAAKGQGNHPPQLEHINHPNLYFDRSRQL 503
>gi|403341719|gb|EJY70175.1| Primase, DNA, polypeptide 2 (58kDa) [Oxytricha trifallax]
Length = 454
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 142/369 (38%), Positives = 217/369 (58%), Gaps = 27/369 (7%)
Query: 88 DIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKRALMEEFDLPCKAISRTE 147
D ISHF+ RL YCRTE+LRKWFL+ E L++ R +E + L+E L C
Sbjct: 49 DNISHFICRLAYCRTEELRKWFLTQEVRLFQARMSEVKAETIQQLLE---LQCN----IR 101
Query: 148 FENAKEKLE-------QVARSFDQPLPTADAIFYKVPFEEVPELVAGRRVYIHKGHAYVA 200
+E KE + +++ F + F KVPF+E LV R+V++ G AYV+
Sbjct: 102 YEQVKEDDQDWKQYGAKISFKFLKAEERRANCFVKVPFKEAISLVNRRQVFLLNGIAYVS 161
Query: 201 MHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEALSMSYLGP-DYSQTK 259
+ + +++ FR+ +S L+ + + ++++ RL LS+S G D++ T+
Sbjct: 162 IKDLTTILGAHFRARVSSELVKAAKFMSEFLKDERISRLL-----LSLSNHGAIDFNITE 216
Query: 260 -----EFGEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRME 314
+ +I + DLD +R SFP CM+ L LR HHLKH GR+QLGLF+KG+GL ME
Sbjct: 217 AKAPTDTDKIKLSDLDYYSRKSFPPCMKSLMTALRNKHHLKHWGRLQLGLFIKGLGLTME 276
Query: 315 DALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQKIIS-STPGVGDHH 373
+A FWK EF + + +++F+K + Y+IRH +GKEGK+ DY P++C K+I+ +TPG ++H
Sbjct: 277 EAYTFWKQEFCKTMDSDKFEKGHGYNIRHMFGKEGKKADYKPWNCNKVINQTTPGPEEYH 336
Query: 374 GCPYRHFSEENLRAALGRMGVGSRAMEDVVDKVRNRHYQLACTLTFEAVHSSSCDAGI-N 432
GCP++ +SEE+LR + GV M ++DK R +Q+AC FEA H + + N
Sbjct: 337 GCPFKTYSEEHLRQLISSYGVKPEEMRPIIDKRRENLHQVACLRLFEASHPNGVADNVGN 396
Query: 433 HPNQYFSDS 441
HPN +FS S
Sbjct: 397 HPNAFFSSS 405
>gi|242803193|ref|XP_002484124.1| DNA primase large subunit [Talaromyces stipitatus ATCC 10500]
gi|218717469|gb|EED16890.1| DNA primase large subunit [Talaromyces stipitatus ATCC 10500]
Length = 501
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 168/459 (36%), Positives = 244/459 (53%), Gaps = 45/459 (9%)
Query: 21 LPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEEMENLVRDLWK------- 73
L Y P E+ LE+FE +A+DRL+VL I R K P+E E + + K
Sbjct: 38 LNFYDVPPTAEITLEEFEQWAIDRLKVLAEIEACSYRNKSPQETEAHIAPVLKKYLNLSS 97
Query: 74 -----ANMRHPEASEDVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEA 128
+ + + + KD SHF+LRL + TE+LR F+ ET L+++RF S+
Sbjct: 98 NSSASGGVVNQQLKNERQKDHYSHFILRLAFSATEELRHRFVRAETMLFKFRFQKDDSKE 157
Query: 129 KRALMEEFDLPCKAISRTEFENAKEKLEQVARSFDQPLPTADAIFYKVPFEEVPELVAGR 188
+RA +E +L + +S E E EQ+ S D ++KV +E+VPEL+ R
Sbjct: 158 RRAFIESLNLNWEPVSD---EEKSELAEQLVTSTPGLRRADDESWFKVDWEKVPELIERR 214
Query: 189 RVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEALSM 248
V+I KG AYV + +S++V F + L KA+ LT+R + R E DRLTPI+ LS
Sbjct: 215 AVFIRKGKAYVPQREQLSMIVADFTARLEKAMELTSR---ALPRLDEDDRLTPILNHLSK 271
Query: 249 SYLGPD--YSQTK---EFGEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLG 303
++ + YS+ + + I+ +D L++ FPLCMR L LR+++HLKH GR+Q
Sbjct: 272 NFGSAESVYSEGEGVVDGAPITAASIDPLSQH-FPLCMRSLHMTLRKNNHLKHFGRLQYS 330
Query: 304 LFLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTD-----YTPYS 358
LFLKG+GL +++ + FW+ F + + F+ +Y Y+IRH YG G + Y PYS
Sbjct: 331 LFLKGIGLSLDECILFWRQSF-KGFSDDEFNSKYKYNIRHVYGDVGGDANRRGRGYPPYS 389
Query: 359 CQKIIS-STPGVGDHHGCPYRHFSEENLRAALGRMGVGSR-AMEDVVDKVRNRHYQLACT 416
CQKI+S S P G HGCPYRHFS +NL A L GV + + V + V + Y +AC
Sbjct: 390 CQKILSESAPSTGQTHGCPYRHFSVDNLTALLQSTGVHDKDLLRGVREDVEKQRYHIACN 449
Query: 417 LTFEAVHSSSC-----DAGIN--------HPNQYFSDSH 442
FE H + D N HPN YF S+
Sbjct: 450 RVFEWTHKADIKRVKEDGSWNQADLDTIVHPNTYFKRSY 488
>gi|261187504|ref|XP_002620174.1| DNA primase large subunit [Ajellomyces dermatitidis SLH14081]
gi|239594171|gb|EEQ76752.1| DNA primase large subunit [Ajellomyces dermatitidis SLH14081]
gi|239609391|gb|EEQ86378.1| DNA primase large subunit [Ajellomyces dermatitidis ER-3]
gi|327357810|gb|EGE86667.1| DNA primase large subunit [Ajellomyces dermatitidis ATCC 18188]
Length = 504
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 171/464 (36%), Positives = 243/464 (52%), Gaps = 44/464 (9%)
Query: 15 NDSVSTLPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEEMENLVRDLWKA 74
+D L Y P E+ LE FE +A+DRLRVL + R K P E + L
Sbjct: 32 HDYAHRLNFYEIPPTQEITLEQFEQWAIDRLRVLAELEACSYRNKTPAETAAHITPLLNK 91
Query: 75 NM---RHPEASEDVN--------KDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLL 123
+ + +S V+ KD SHF+LRL + TEDLR+ F +ET L+++RF +
Sbjct: 92 FLPLSANTSSSTGVDQRLRNERQKDHYSHFILRLAFSSTEDLRRRFARLETMLFKFRFQM 151
Query: 124 GSSEAKRALMEEFDLPCKAISRTEFENAKEKLEQVARSFDQPLPTADAIFYKVPFEEVPE 183
S+ +RA +E + +S E + L + D ++KV +E VPE
Sbjct: 152 DDSKERRAFIESLNFNWDMVSDEEKHQLGDSLLACTYGVRR---LEDESWFKVDWERVPE 208
Query: 184 LVAGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIV 243
LV R V++ KG AYV + + +S+++ +F + L KAL T+R + R E DRLTPI+
Sbjct: 209 LVERRGVFMKKGKAYVPVREQLSMILAEFTARLEKALEFTSR---ALPRLDEDDRLTPIL 265
Query: 244 EALSMSYLGPDYSQTKEFGE-----ISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGG 298
+ LS ++ D S + G I+ +D L++ FP CMR+L +LR++ HLKH G
Sbjct: 266 DHLSKNFGTSDSSYAEGEGSVPGAPITAASIDALSQH-FPPCMRNLHMQLRKNSHLKHFG 324
Query: 299 RMQLGLFLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTD----- 353
R+Q LFLKG+GL ++DAL FW+ F E F +Y Y++RH YG G +
Sbjct: 325 RLQYTLFLKGIGLSLQDALIFWRQSFKIFTDDE-FSSKYKYNVRHAYGDVGGDVNRRGRG 383
Query: 354 YTPYSCQKIIS-STPGVGDHHGCPYRHFSEENLRAALGRMGVGSR-AMEDVVDKVRNRHY 411
Y PYSCQKI++ ++PG G HGCPYRHFS ENL + L GV + + V + V Y
Sbjct: 384 YPPYSCQKILTDNSPGAGQTHGCPYRHFSVENLISLLQATGVNDKEVLRGVREDVGKTRY 443
Query: 412 QLACTLTFEAVHSSSC----DAG---------INHPNQYFSDSH 442
LAC FE VH + D G I HPN YF S+
Sbjct: 444 HLACNRVFEWVHRAEIKQVRDEGSWSQTDLDTIVHPNTYFKRSY 487
>gi|226287472|gb|EEH42985.1| DNA primase large subunit [Paracoccidioides brasiliensis Pb18]
Length = 504
Score = 262 bits (670), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 172/470 (36%), Positives = 250/470 (53%), Gaps = 44/470 (9%)
Query: 9 SRTNTPNDSVSTLPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEEMENLV 68
S T +D L Y P E+ LE+FE +A+DRLR+L + R K P E +
Sbjct: 26 SPTYKQHDYSHRLNFYEIPPTQEITLEEFEQWAIDRLRILAELEACSYRNKSPAETAAHI 85
Query: 69 RDLWKANM---RHPEASEDVN--------KDIISHFVLRLVYCRTEDLRKWFLSMETALY 117
L + + +S V+ KD SHF+LRL + TEDLR+ F +ET L+
Sbjct: 86 TPLLSKFLPLSSNRSSSTGVDERLRNERRKDHYSHFILRLAFSSTEDLRRRFARLETMLF 145
Query: 118 RYRFLLGSSEAKRALMEEFDLPCKAISRTEFENAKEKLEQVARSFDQPLPTADAIFYKVP 177
++RF ++ +A ++ + +S E E L +A +F ++ F KV
Sbjct: 146 KFRFQQDDTKENQAFVQSLNFNWDMVSDEEKHELGESL--LASTFGARRLDEESWF-KVD 202
Query: 178 FEEVPELVAGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERD 237
+++VPELV R V++ KG AYV + + +S+++ +F + L KAL T+R + R E D
Sbjct: 203 WDKVPELVERRGVFVKKGKAYVPVREQLSMILAEFTARLEKALEFTSR---ALPRLDEDD 259
Query: 238 RLTPIVEALSMSYLGPDYSQTKEFGE-----ISIKDLDQLARSSFPLCMRHLFDKLREDH 292
RLTPI++ LS ++ D S ++ G I+ +D L++ FPLCMR+L +LR++
Sbjct: 260 RLTPILDHLSKNFGTSDSSYSEGEGSVPGAPITASSIDALSQH-FPLCMRNLHMQLRKNS 318
Query: 293 HLKHGGRMQLGLFLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRT 352
HLKH GR+Q LFLKG+GL +EDAL FW+ F E F+ +Y Y++RH YG G
Sbjct: 319 HLKHFGRLQYTLFLKGIGLSLEDALIFWRQSFKTFTDDE-FNSKYKYNVRHAYGDVGGDV 377
Query: 353 D-----YTPYSCQKIIS-STPGVGDHHGCPYRHFSEENLRAALGRMGVGSR-AMEDVVDK 405
+ Y PYSCQKI++ ++PG G HGCPYRHFS +NL L GV + + V +
Sbjct: 378 NRRGRGYPPYSCQKILTDNSPGAGQTHGCPYRHFSVDNLITLLQATGVNDKDVLRGVKED 437
Query: 406 VRNRHYQLACTLTFEAVHSSSC----DAG---------INHPNQYFSDSH 442
V Y LAC FE VH + D G I HPN YF S+
Sbjct: 438 VGKTRYHLACNRVFEWVHKAEIKKVRDEGTWSQTELDTIVHPNTYFKRSY 487
>gi|358372016|dbj|GAA88621.1| DNA primase large subunit [Aspergillus kawachii IFO 4308]
Length = 531
Score = 262 bits (670), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 169/463 (36%), Positives = 246/463 (53%), Gaps = 45/463 (9%)
Query: 21 LPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEEME-NLVRDLWK-----A 74
L Y P E+ LE FE +A+DRL+VL I R K P E E ++ L K +
Sbjct: 69 LNFYEIPPTDEITLEQFEQWAIDRLKVLAEIEACSYRNKSPAETEAHITPHLQKYLPLSS 128
Query: 75 NMRHPEASEDV------NKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEA 128
N + D KD SHF+LRL + TE+LR+ F+ ET L+R+RF +
Sbjct: 129 NTSSSNGAADQRLKNERQKDHYSHFILRLAFSATEELRRRFVRAETMLFRFRFQRDDTRE 188
Query: 129 KRALMEEFDLPCKAISRTEFENAKEKLEQVARSFDQPLPTADAIFYKVPFEEVPELVAGR 188
+RA +E +L + + E + E+L + + D +YKV +E+VPELV
Sbjct: 189 RRAFIESLNLDWEPVDDEEKQRLAEQLLAASPGLRR---IDDETWYKVDWEKVPELVEKW 245
Query: 189 RVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEALSM 248
V++ KG AYV + +S+++ +F + L +AL LT+R + R E DRLTPI+ LS
Sbjct: 246 AVFLSKGKAYVPGREQLSMIIAEFTARLERALELTSR---ALPRLDEDDRLTPILNHLSK 302
Query: 249 SYLGPD--YSQTKEF---GEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLG 303
++ + Y++ + F I+ ++D+L++ FPLCMR L LR+++HLKH GR+Q
Sbjct: 303 NFGSAESVYTENEGFVDGAPITANNIDRLSQH-FPLCMRSLHMNLRKNNHLKHYGRLQYT 361
Query: 304 LFLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTD-----YTPYS 358
LFLKG+GL +E+ + FW+ F + + + F+ Y Y+IRH YG G + Y PYS
Sbjct: 362 LFLKGIGLSLEECIVFWRQGF-KGLTDDEFNSRYKYNIRHAYGDVGGDQNRRGRGYPPYS 420
Query: 359 CQKIIS-STPGVGDHHGCPYRHFSEENLRAALGRMGVGSR-AMEDVVDKVRNRHYQLACT 416
CQKI+ S PGVG HGCPYRHFS +NL L GV R + V + V + +AC
Sbjct: 421 CQKILGDSNPGVGQTHGCPYRHFSVDNLIGLLQSTGVNDRDVLRGVREDVEKMRFHIACN 480
Query: 417 LTFEAVHSSSC-----DAGIN--------HPNQYFSDSHKILQ 446
FE H + D N HPN YF S+ + Q
Sbjct: 481 RVFEHTHKADIKRVKEDGTWNQTDLDTIVHPNTYFKRSYLLKQ 523
>gi|119497091|ref|XP_001265313.1| DNA primase large subunit [Neosartorya fischeri NRRL 181]
gi|119413475|gb|EAW23416.1| DNA primase large subunit [Neosartorya fischeri NRRL 181]
Length = 500
Score = 262 bits (669), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 171/463 (36%), Positives = 238/463 (51%), Gaps = 45/463 (9%)
Query: 21 LPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEEMENLVRDLWKANM---- 76
L Y P E+ LE FE +A+DRL+VL I R K E + L + +
Sbjct: 38 LNFYDIPPTAEITLEQFEQWAIDRLKVLAEIEACSYRNKSAAETAAHITPLLQKYLPLSS 97
Query: 77 --------RHPEASEDVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEA 128
+ KD SHF+LRL + TEDLR+ F+ ET L+R+RF S
Sbjct: 98 NTSSSSGASDQRLKNERQKDHYSHFILRLAFSATEDLRRRFVRAETMLFRFRFQQDDSRE 157
Query: 129 KRALMEEFDLPCKAISRTEFENAKEKLEQVARSFDQPLPTADAIFYKVPFEEVPELVAGR 188
KRA +E +L + +S E EKL + + +YKV +E VPELV R
Sbjct: 158 KRAFIESLNLDWEPVSDEERREVAEKLVSATPGLRR---VDEETWYKVDWERVPELVERR 214
Query: 189 RVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEALSM 248
V + KG AYV + +S+++ +F + L +AL LT+R + R E DRLTPI+ LS
Sbjct: 215 AVLLSKGKAYVPGREQLSMIIAEFTARLERALELTSR---ALPRLDEDDRLTPILNHLSK 271
Query: 249 SYLGPD--YSQTKEFGE---ISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLG 303
++ + YS+ + F E I+ ++D+L++ FPLCMR L LR+++HLKH GR+Q
Sbjct: 272 NFGSAESVYSEGEGFVEGAPITASNIDRLSQH-FPLCMRSLHMTLRKNNHLKHFGRLQYT 330
Query: 304 LFLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTD-----YTPYS 358
LFLKG+GL +E+ + FW+ F E F+ Y Y+IRH YG G + Y PYS
Sbjct: 331 LFLKGIGLSLEECIIFWRQSFKGFTDDE-FNSRYKYNIRHAYGDVGGDVNRRGRGYPPYS 389
Query: 359 CQKIIS-STPGVGDHHGCPYRHFSEENLRAALGRMGVGSR-AMEDVVDKVRNRHYQLACT 416
CQKI++ S PGVG HGCPYRHFS +NL L GV + + V + V Y +AC
Sbjct: 390 CQKILNDSNPGVGQTHGCPYRHFSVDNLIGLLQSTGVHDKDVLRGVREDVEKTRYHIACN 449
Query: 417 LTFEAVHSSSCD-------------AGINHPNQYFSDSHKILQ 446
FE H + I HPN YF S+ + Q
Sbjct: 450 RVFEWAHKADIKRVKEDGTWSQTDLDTIVHPNTYFKRSYLLKQ 492
>gi|380485258|emb|CCF39473.1| DNA primase large subunit, partial [Colletotrichum higginsianum]
Length = 449
Score = 262 bits (669), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 156/416 (37%), Positives = 235/416 (56%), Gaps = 25/416 (6%)
Query: 21 LPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEEMENLVRDLW------KA 74
L Y AP ++ LE FE +A+DRLR+L + R K P+E+ N ++ L ++
Sbjct: 38 LNFYADAPTADITLEQFEQWAIDRLRILAELEACAFRNKSPQEVANHMKPLLDKYLPLES 97
Query: 75 NMRH-PEASEDVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKRALM 133
N H P+ KD SHF+LRL + RTEDLR+ F +ET L+R R + A +
Sbjct: 98 NSSHSPKLFAQRQKDHYSHFILRLAFARTEDLRRRFTRVETMLFRLRLNSDDQNERSAFV 157
Query: 134 EEFDLPC-KAISRTEFENAKEKLEQVARSFDQPLPTADAIFYKVPFEEVPELVAGRRVYI 192
DL +A++ E + +L ++R + + T D ++KV ++ VPELV R+V++
Sbjct: 158 RSLDLDWWEAVTDDEKRDYASELAAMSRGWGKTASTDDDTWFKVDWDRVPELVEQRKVFL 217
Query: 193 HKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEALSMSYLG 252
G A+V + S+V+ +F S L + L LT R + R E DRLTPI++ LS +++
Sbjct: 218 KAGKAFVPGREQASMVIGEFVSRLERQLELTAR---ALPRLDEDDRLTPILDHLSKNFIT 274
Query: 253 PDYSQTKEFG-----EISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLK 307
PD S + EI+ +++D LA+ FP CM HL LR D HLKH GR+Q LFLK
Sbjct: 275 PDSSYSSNTAAPAGAEITARNIDNLAQH-FPACMSHLHRSLRRDAHLKHYGRLQYTLFLK 333
Query: 308 GVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYG-----KEGKRTDYTPYSCQKI 362
G+GL +E+ L FW+ F + + + F+KEY Y++RH YG + Y+P+SCQKI
Sbjct: 334 GIGLNLEECLVFWRQGF-RNITDDTFNKEYRYNVRHVYGDVGGXSNRRGGGYSPFSCQKI 392
Query: 363 ISS-TPGVGDHHGCPYRHFSEENLRAALGRMGVGSRA-MEDVVDKVRNRHYQLACT 416
++ PG G+ HG YRHF+ ENL + MGV RA ++ V + N+ + +AC
Sbjct: 393 LTEHPPGAGEAHGXXYRHFNLENLTTLVQAMGVSDRATLQGVKEDKDNQKFHMACN 448
>gi|225677794|gb|EEH16078.1| DNA primase large subunit [Paracoccidioides brasiliensis Pb03]
Length = 504
Score = 262 bits (669), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 173/470 (36%), Positives = 249/470 (52%), Gaps = 44/470 (9%)
Query: 9 SRTNTPNDSVSTLPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEEMEN-- 66
S T +D L Y P E+ LE+FE +A+DRLR+L + R K P E
Sbjct: 26 SPTYKQHDYSHRLNFYEIPPTQEITLEEFEQWAIDRLRILAELEACSYRNKSPAETAAHI 85
Query: 67 ---LVRDLWKANMRHPEASEDVN------KDIISHFVLRLVYCRTEDLRKWFLSMETALY 117
L + L ++ R D KD SHF+LRL + TEDLR+ F +ET L+
Sbjct: 86 TPLLAKFLPLSSNRSSSTGVDERLRNERRKDHYSHFILRLAFSSTEDLRRRFARLETMLF 145
Query: 118 RYRFLLGSSEAKRALMEEFDLPCKAISRTEFENAKEKLEQVARSFDQPLPTADAIFYKVP 177
++RF ++ +A ++ + +S E E L +A +F ++ F KV
Sbjct: 146 KFRFQQDDTKENQAFVQSLNFNWDMVSDEEKHELGESL--LASTFGARRLDEESWF-KVD 202
Query: 178 FEEVPELVAGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERD 237
+++VPELV R V++ KG AYV + + +S+++ +F + L KAL T+R + R E D
Sbjct: 203 WDKVPELVERRGVFVKKGKAYVPVREQLSMILAEFTARLEKALEFTSR---ALPRLDEDD 259
Query: 238 RLTPIVEALSMSYLGPDYSQTKEFGE-----ISIKDLDQLARSSFPLCMRHLFDKLREDH 292
RLTPI++ LS ++ D S ++ G I+ +D L++ FPLCMR+L +LR++
Sbjct: 260 RLTPILDHLSKNFGTSDSSYSEGEGSVPGAPITASSIDALSQH-FPLCMRNLHMQLRKNS 318
Query: 293 HLKHGGRMQLGLFLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRT 352
HLKH GR+Q LFLKG+GL +EDAL FW+ F E F+ +Y Y++RH YG G
Sbjct: 319 HLKHFGRLQYTLFLKGIGLSLEDALIFWRQSFKTFTDDE-FNSKYKYNVRHAYGDVGGDV 377
Query: 353 D-----YTPYSCQKIIS-STPGVGDHHGCPYRHFSEENLRAALGRMGVGSR-AMEDVVDK 405
+ Y PYSCQKI++ ++PG G HGCPYRHFS +NL L GV + + V +
Sbjct: 378 NRRGRGYPPYSCQKILTDNSPGAGQTHGCPYRHFSVDNLITLLQATGVNDKDVLRGVKED 437
Query: 406 VRNRHYQLACTLTFEAVHSSSC----DAG---------INHPNQYFSDSH 442
V Y LAC FE VH + D G I HPN YF S+
Sbjct: 438 VGKTRYHLACNRVFEWVHKAEIKKVRDEGTWSQTELDTIVHPNTYFKRSY 487
>gi|328855912|gb|EGG05036.1| hypothetical protein MELLADRAFT_48962 [Melampsora larici-populina
98AG31]
Length = 481
Score = 262 bits (669), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 155/472 (32%), Positives = 256/472 (54%), Gaps = 48/472 (10%)
Query: 10 RTNTPNDSV-------STLPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPE 62
++N ND + + L Y P ++ ++ FE +A++RL+VL I ++L+R + E
Sbjct: 15 QSNNLNDPILSTLQYQTRLNFYSQPPTTDITIDQFETWAINRLKVLAEIENSLSRNRSFE 74
Query: 63 EMENLVRDLWKANM---RHPEASEDVNK----DIISHFVLRLVYCRTEDLRKWFLSMETA 115
E++ ++ + K + + S D++ D SH++LRL +CR+E+L F++ ET
Sbjct: 75 ELKPILTNRCKECLPLSANTAKSVDLDSQRKIDHYSHYILRLAFCRSEELSSRFVNAETL 134
Query: 116 LYRYRFLLGSSEAKRALMEEFDLPCKAISRTEFENAKEKLEQVARSFDQPLPTADAIFYK 175
L+++RF + + + + + + + E + K ++ P D +YK
Sbjct: 135 LFKFRFETEDTLERIKFIPSLKIDWQQVDQNEVTHIKTMMKD---------PNEDT-YYK 184
Query: 176 VPFEEVPELVAGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQE 235
V + +VP+LV+ R+VY+ G+AYV+ S++ +F S L KAL +T++ E
Sbjct: 185 VRWTKVPDLVSSRKVYLKAGYAYVSSKDQASIIFQEFSSRLKKALEITSKHLPDL---DE 241
Query: 236 RDRLTPIVEALSMSYL-GPDYSQ--TKEFGE----ISIKDL-DQLARSSFPLCMRHLFDK 287
RL P++E LS+++L G SQ + G+ + D+ D LA+ FP CMRHL++
Sbjct: 242 DSRLLPVLEHLSLNFLAGISGSQYVARNPGDPDSAVFTSDMVDDLAKQHFPPCMRHLWNI 301
Query: 288 LREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGK 347
LR+D HLK+GGR Q LFLKG+GL +++AL FW+ F V ++F K+Y Y IRHNYG
Sbjct: 302 LRKDKHLKYGGRQQFNLFLKGIGLPVDEALIFWRKAFCN-VSDDKFRKDYRYGIRHNYGL 360
Query: 348 EGKRTDYTPYSCQKIISSTPGVGDHHGCPYRHFSEENLRAALGR---MGVGSRAMEDVVD 404
EG R +Y P C II + G D HGCP++ F+ NL L + + S ++D+++
Sbjct: 361 EGSRKNYQPMPCTTIIKNGAGPSDSHGCPFKQFTPINLTQFLTQSYGLNSNSNEIKDILN 420
Query: 405 KVRNRHYQLACTLTFEAVHSS---------SCDAGINHPNQYFSDSHKILQP 447
++ Y L+CT FE H ++HPN+YF SHK+ P
Sbjct: 421 WNKSSLYHLSCTCVFEVHHKKYGVKKGQGVGQSESVSHPNRYFEASHKLSHP 472
>gi|295663501|ref|XP_002792303.1| DNA primase large subunit [Paracoccidioides sp. 'lutzii' Pb01]
gi|226278973|gb|EEH34539.1| DNA primase large subunit [Paracoccidioides sp. 'lutzii' Pb01]
Length = 504
Score = 261 bits (668), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 172/470 (36%), Positives = 251/470 (53%), Gaps = 44/470 (9%)
Query: 9 SRTNTPNDSVSTLPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEEMEN-- 66
S T +D L Y P E+ LE+FE +A+DRLR+L + R K P E
Sbjct: 26 SPTYKQHDYSHRLNFYEIPPTQEITLEEFEQWAIDRLRILAELEACSYRNKSPAETAAHI 85
Query: 67 ---LVRDLWKANMRHPEASEDVN------KDIISHFVLRLVYCRTEDLRKWFLSMETALY 117
L + L ++ R D KD SHF+LRL + TEDLR+ F +ET L+
Sbjct: 86 TPLLAKFLPLSSNRSSSTGVDERLRNERRKDHYSHFILRLAFSSTEDLRRRFARLETMLF 145
Query: 118 RYRFLLGSSEAKRALMEEFDLPCKAISRTEFENAKEKLEQVARSFDQPLPTADAIFYKVP 177
++RF ++ +A ++ + +S E E L +A +F ++ F KV
Sbjct: 146 KFRFQQDDTKENQAFVQSLNFNWVMVSDEEKHELGESL--LASTFGARRLDEESWF-KVD 202
Query: 178 FEEVPELVAGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERD 237
+++VPELV R V++ KG AYV + + +S+++ +F + L KAL T+R + R E D
Sbjct: 203 WDKVPELVERRGVFVKKGKAYVPVREQLSMILAEFTARLEKALEFTSR---ALPRLDEDD 259
Query: 238 RLTPIVEALSMSYLGPDYSQTKEFGE-----ISIKDLDQLARSSFPLCMRHLFDKLREDH 292
RLTPI++ LS ++ D S ++ G I+ +D L++ FPLCMR+L +LR++
Sbjct: 260 RLTPILDHLSKNFGTSDSSYSEGEGSVPGAPITASSIDALSQH-FPLCMRNLHMQLRKNS 318
Query: 293 HLKHGGRMQLGLFLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRT 352
HLKH GR+Q LFLKG+GL +EDAL FW+ F + + F+ +Y Y++RH YG G
Sbjct: 319 HLKHFGRLQYTLFLKGIGLSLEDALIFWRQSF-KTFKDDEFNSKYKYNVRHAYGDVGGDV 377
Query: 353 D-----YTPYSCQKIIS-STPGVGDHHGCPYRHFSEENLRAALGRMGVGSR-AMEDVVDK 405
+ Y PYSCQKI++ ++PG G HGCPYRHFS +NL L GV + + V +
Sbjct: 378 NRRGRGYPPYSCQKILTDNSPGAGQTHGCPYRHFSVDNLITLLQATGVNDKDVLRGVKED 437
Query: 406 VRNRHYQLACTLTFEAVHSSSC----DAG---------INHPNQYFSDSH 442
V Y LAC+ FE VH + D G I HPN YF S+
Sbjct: 438 VGKTRYHLACSRVFEWVHKAEIKKVRDEGTWSQTELDTIVHPNTYFKRSY 487
>gi|67515957|ref|XP_657864.1| hypothetical protein AN0260.2 [Aspergillus nidulans FGSC A4]
gi|40746977|gb|EAA66133.1| hypothetical protein AN0260.2 [Aspergillus nidulans FGSC A4]
gi|259489522|tpe|CBF89862.1| TPA: Subunit of DNA primase (Eurofung) [Aspergillus nidulans FGSC
A4]
Length = 500
Score = 261 bits (668), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 168/463 (36%), Positives = 241/463 (52%), Gaps = 45/463 (9%)
Query: 21 LPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEEMENLVRDLWK------A 74
L Y P E+ LE FE +A+DRL++L I R K E + L + A
Sbjct: 38 LNFYDTPPTAEITLEQFEQWAIDRLKILAEIEACSYRNKTAAETTAHITPLLQKFLPLSA 97
Query: 75 NMRHPEASEDV------NKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEA 128
N P+ + D KD SHF+LRL + TEDLR+ F ET L+R+RF S
Sbjct: 98 NTSSPKGAADPRIKNERQKDHYSHFILRLAFSATEDLRRRFARAETMLFRFRFQADDSRE 157
Query: 129 KRALMEEFDLPCKAISRTEFENAKEKLEQVARSFDQPLPTADAIFYKVPFEEVPELVAGR 188
+RA ++ +L +++ E E L + + + +YKV +E VPELV R
Sbjct: 158 RRAFIDSLNLDWESVGEDERRELSEYLVAATPGLRR---SDEDTWYKVDWERVPELVERR 214
Query: 189 RVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEALSM 248
V++ KG AYV + +S+++ +F + L +AL LT+R + R E DRL+PI+ LS
Sbjct: 215 SVFLSKGKAYVPEREQLSMIIAEFTARLERALELTSR---ALPRLDEDDRLSPILNHLSK 271
Query: 249 SYLGPD--YSQTKEF---GEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLG 303
++ + Y++ + F I+ +D L++ FPLCMR L LR+++HLKH GR+Q
Sbjct: 272 NFGSAESVYTEGEGFVDGAPITAASIDPLSQH-FPLCMRSLHMSLRKNNHLKHFGRLQYT 330
Query: 304 LFLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTD-----YTPYS 358
LFLKG+GL +E+ + FW+ F + E F+ Y Y++RH YG G + Y PYS
Sbjct: 331 LFLKGIGLSLEECILFWRQSF-KGFTDEEFNSRYKYNVRHAYGDVGGDINRRGRGYPPYS 389
Query: 359 CQKIISST-PGVGDHHGCPYRHFSEENLRAALGRMGVGSR-AMEDVVDKVRNRHYQLACT 416
CQKI+S T PG G HGCPYRHFS +NL L GV + + V + V Y +AC
Sbjct: 390 CQKILSDTNPGAGQTHGCPYRHFSVDNLIGLLQSTGVNDKDLLRGVREDVEKTRYHIACN 449
Query: 417 LTFEAVHSSSC-------DAG------INHPNQYFSDSHKILQ 446
FE H + AG I HPN YF S+ + Q
Sbjct: 450 RVFEYTHKAEIKRAKEDGSAGEIELDTIVHPNTYFKRSYLLKQ 492
>gi|146322404|ref|XP_750091.2| DNA primase large subunit [Aspergillus fumigatus Af293]
gi|129557000|gb|EAL88053.2| DNA primase large subunit [Aspergillus fumigatus Af293]
gi|159130572|gb|EDP55685.1| DNA primase large subunit [Aspergillus fumigatus A1163]
Length = 500
Score = 261 bits (667), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 171/463 (36%), Positives = 238/463 (51%), Gaps = 45/463 (9%)
Query: 21 LPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEEMENLVRDLWKANMR--- 77
L Y P E+ LE FE +A+DRL+VL I R K E + L + +
Sbjct: 38 LNFYDIPPTAEITLEQFEQWAIDRLKVLAEIEACSYRNKSAAETSAHITPLLQKYLPLSS 97
Query: 78 ---------HPEASEDVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEA 128
+ KD SHF+LRL + TEDLR+ F+ ET L+R+RF S
Sbjct: 98 NTSSSSGALDQRLKNERQKDHYSHFILRLAFSATEDLRRRFVRAETMLFRFRFQQDDSRE 157
Query: 129 KRALMEEFDLPCKAISRTEFENAKEKLEQVARSFDQPLPTADAIFYKVPFEEVPELVAGR 188
KRA +E +L + +S E EKL + + +YKV +E VPELV R
Sbjct: 158 KRAFIESLNLDWEPVSDEERREVAEKLVSATPGLRR---VDEETWYKVDWERVPELVERR 214
Query: 189 RVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEALSM 248
V + KG AYV + +S+++ +F + L +AL LT+R + R E DRLTPI+ LS
Sbjct: 215 AVLLSKGKAYVPGREQLSMIIAEFTARLERALELTSR---ALPRLDEDDRLTPILNHLSK 271
Query: 249 SYLGPD--YSQTKEFGE---ISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLG 303
++ + YS+ + F E I+ ++D+L++ FPLCMR L LR+++HLKH GR+Q
Sbjct: 272 NFGSAESVYSEGEGFVEGAPITASNIDRLSQH-FPLCMRSLHMTLRKNNHLKHFGRLQYT 330
Query: 304 LFLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTD-----YTPYS 358
LFLKG+GL +E+ + FW+ F E F+ Y Y+IRH YG G + Y PYS
Sbjct: 331 LFLKGIGLSLEECIIFWRQSFKGFTDDE-FNSRYKYNIRHAYGDVGGDVNRRGRGYPPYS 389
Query: 359 CQKIIS-STPGVGDHHGCPYRHFSEENLRAALGRMGVGSR-AMEDVVDKVRNRHYQLACT 416
CQKI++ S PGVG HGCPYRHFS +NL L GV + + V + V Y +AC
Sbjct: 390 CQKILNDSNPGVGQTHGCPYRHFSVDNLIGLLQSTGVHDKDVLRGVREDVEKTRYHIACN 449
Query: 417 LTFEAVHSSSCD-------------AGINHPNQYFSDSHKILQ 446
FE H + I HPN YF S+ + Q
Sbjct: 450 RVFEWAHKADIKRVKEDGTWGQTDLDTIVHPNTYFKRSYLLKQ 492
>gi|294655046|ref|XP_457125.2| DEHA2B03740p [Debaryomyces hansenii CBS767]
gi|199429647|emb|CAG85118.2| DEHA2B03740p [Debaryomyces hansenii CBS767]
Length = 520
Score = 261 bits (666), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 161/489 (32%), Positives = 252/489 (51%), Gaps = 68/489 (13%)
Query: 13 TPNDSVSTLPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEEMENLVRDLW 72
+ N S L Y P E+ LE+FE +A+DRL++L I +AR K +++E ++ L+
Sbjct: 29 SANQYNSRLSFYDLPPLEEITLEEFETWAIDRLKILIEIESCVARSKSIKDIEQTIKPLF 88
Query: 73 -KANMRHPEAS-------EDVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLG 124
K +P ++ ++ KD SH++LRLV+CRTE+LRK F+ ET L++ R+ +
Sbjct: 89 LKYLPLNPSSTNNEAMTYQERRKDHYSHYILRLVFCRTEELRKKFIKNETILFKVRYNML 148
Query: 125 SSEAKRALMEEFD--LPCKAISRTE----------------------------FENAKEK 154
+ ++ + + LP + IS E F E+
Sbjct: 149 QPKEQQEFIASYKDKLPWQYISNEEKVDMFEDLYAATGATVRNVLFMESGDPSFTITNEQ 208
Query: 155 LEQVARSFDQPLPTADAIFYKVPFEEVPELVAGRRVYIHKGHAYVAMHQVVSLVVTQFRS 214
L+Q R + F K+PF++VP LVA R V + G+AY+ ++L+ +F+
Sbjct: 209 LKQHIRVKEN--------FIKLPFDKVPNLVASRSVLLKSGYAYIPSTLQLNLLSIEFQD 260
Query: 215 NLSKALILTNRKWTSTIREQERDRLTPIVEALSMSYLGPDYSQTKEFGEISIKDLDQLAR 274
L++ L+ R + + R +E DRL P++ LS ++ Y I D++ +
Sbjct: 261 ILTRNLM---RTFQTLPRLEEDDRLLPLLNNLSHNFSNIQYESAFGSDPSLISDINAQSI 317
Query: 275 SS------FPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWKAEF---S 325
++ +PLC HL L + H+K+ GR QLGLFLKG+GL +++AL FW +F S
Sbjct: 318 TTPAINKHYPLCASHLQKNLILNSHMKYQGRQQLGLFLKGIGLNVDEALKFWSYQFTKSS 377
Query: 326 QKVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQKIISS-TPGVGDHHGCPYRHFSEEN 384
+ E+F+KEY Y+IRHNYG EG R +Y P+ C +I+S P G++HGCPYR S +
Sbjct: 378 NAINLEKFNKEYKYNIRHNYGLEGARINYKPWDCARILSKPKPSKGEYHGCPYRDLSVDA 437
Query: 385 LRAALGRMGVGSRA-MEDVVDKVRNRHYQLACTLTFEAVHSSSCDAG--------INHPN 435
L L MG+ + + V+D V Y +ACT FE H + D INHPN
Sbjct: 438 LVNNLNEMGINDQQDINGVIDDVSRNDYTVACTRVFEMTHKNQLDKSNKATEGMHINHPN 497
Query: 436 QYFSDSHKI 444
YF S ++
Sbjct: 498 LYFDRSRQL 506
>gi|121703097|ref|XP_001269813.1| DNA primase large subunit [Aspergillus clavatus NRRL 1]
gi|119397956|gb|EAW08387.1| DNA primase large subunit [Aspergillus clavatus NRRL 1]
Length = 500
Score = 261 bits (666), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 168/463 (36%), Positives = 240/463 (51%), Gaps = 45/463 (9%)
Query: 21 LPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEEMENLVRDLWKANM---- 76
L Y P E+ LE FE +A+DRL++L I R K E + L + +
Sbjct: 38 LNFYDVPPTAEITLEQFEQWAIDRLKILAEIEACSYRNKSATETAAHITPLLQKYLPLSS 97
Query: 77 --------RHPEASEDVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEA 128
+ KD SHF+LRL + TEDLR+ F+ ET L+++RF L S
Sbjct: 98 NTSSSSGAADQRLKNERQKDHYSHFILRLAFSATEDLRRRFVRAETMLFKFRFQLDDSRE 157
Query: 129 KRALMEEFDLPCKAISRTEFENAKEKLEQVARSFDQPLPTADAIFYKVPFEEVPELVAGR 188
+RA +E +L +++S E EKL + + +YKV +E VPELV R
Sbjct: 158 RRAFIESLNLDWESVSDEERRELAEKLANATPGLRR---VDEESWYKVDWERVPELVERR 214
Query: 189 RVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEALSM 248
V + +G AYV + +S+++ +F + L +AL LT+R + R E DRLTPI+ LS
Sbjct: 215 AVLLSRGKAYVPGREQLSMIMAEFTARLERALELTSR---ALPRLDEDDRLTPILNHLSK 271
Query: 249 SYLGPD--YSQTK---EFGEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLG 303
++ + YS+ + + I+ ++D+L++ FPLCMR+L LR+D+HLKH GR+Q
Sbjct: 272 NFGSAESVYSEGEGVVDGASITANNIDRLSQH-FPLCMRNLHMTLRKDNHLKHFGRLQYT 330
Query: 304 LFLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTD-----YTPYS 358
LFLKG+GL +E+ + FW+ F E F+ Y Y+IRH YG G + Y PYS
Sbjct: 331 LFLKGIGLSLEECILFWRQSFKGFTDDE-FNSRYKYNIRHAYGDVGGDVNRRGRGYPPYS 389
Query: 359 CQKIIS-STPGVGDHHGCPYRHFSEENLRAALGRMGVGSR-AMEDVVDKVRNRHYQLACT 416
CQKI+S S PGVG HGCPYRHFS +NL L GV + + V + V Y +AC
Sbjct: 390 CQKILSDSNPGVGQTHGCPYRHFSVDNLIGLLQATGVNDKEVLRGVREDVGKTRYHIACN 449
Query: 417 LTFEAVHSSSCD-------------AGINHPNQYFSDSHKILQ 446
FE H + I HPN YF S+ + Q
Sbjct: 450 RVFEWAHKADIKRVKEDGTWSQTDLDTIVHPNTYFKRSYLLKQ 492
>gi|71019537|ref|XP_759999.1| hypothetical protein UM03852.1 [Ustilago maydis 521]
gi|46099525|gb|EAK84758.1| hypothetical protein UM03852.1 [Ustilago maydis 521]
Length = 543
Score = 261 bits (666), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 161/460 (35%), Positives = 249/460 (54%), Gaps = 41/460 (8%)
Query: 21 LPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEEMENLVRDLWK------A 74
L Y P EV +E FE +A+DRL+VL I + AR + E ++ V L K A
Sbjct: 48 LNFYTLPPTHEVTIEQFESWAIDRLKVLAEIESSQARNRTYGETKDAVNALAKRLLPLNA 107
Query: 75 N--MRHPEASEDVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKRAL 132
N ++ + + KD +SHFVLRL +CR+EDLR+ F+ E+ L+R RF + + +
Sbjct: 108 NTALKTTDLLAERLKDHVSHFVLRLAFCRSEDLRRRFVKAESLLFRLRFETDDAVERESF 167
Query: 133 MEEFDLPCKAISRTEFENAKEKL----EQVARSFDQPLPTADAIFYKVPFEEVPELVAGR 188
M + L + +S E +E+L ++A +F+ F+KV + V +LV R
Sbjct: 168 MRDLKLDWQPVSSEEKSMYREQLVATHPKMATTFES------ETFFKVDWTRVTDLVEKR 221
Query: 189 RVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEALSM 248
RV++ G A+V + + SLV+ +F+S L + L +T R + R E DRL P++ LSM
Sbjct: 222 RVFMRAGQAWVPIKEQSSLVLAEFQSRLLRDLEMTAR---ALPRLDEDDRLLPVLSHLSM 278
Query: 249 SYLG---PDYSQTKEFGE----ISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQ 301
+L DY+ + + ++ +D L ++ P+CM++L L HLKH GR+Q
Sbjct: 279 GFLAGISTDYTGSSITADGSTTVTAGMVDALVKTHAPMCMKNLQSTLTTTGHLKHYGRLQ 338
Query: 302 LGLFLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQK 361
LFLK +GL +E+AL FW+ F + + ++F+KEY Y+IRH YG EG+R +Y SC +
Sbjct: 339 YNLFLKELGLPVEEALVFWRRSF-KHITDDKFNKEYRYNIRHGYGLEGRRMNYPAKSCAR 397
Query: 362 IISS-TPGVGDHHGCPYRHFSEENLRAALGR-MGVGSRAMEDVVDKVRNRHYQLACTLTF 419
I++ PG D HGCP+RHFS NL A+ + G+ +++ V+ HY +ACT F
Sbjct: 398 ILTQDQPGPQDSHGCPFRHFSTTNLSTAMVQHYGLNQAEQSEILASVKQGHYHVACTRIF 457
Query: 420 EAVH-------SSSCDA---GINHPNQYFSDSHKILQPKN 449
E H D + HPN+YF S K+ +N
Sbjct: 458 EITHQRQGVKKGQGLDGRGETVTHPNRYFESSWKLAHAEN 497
>gi|406601212|emb|CCH47112.1| DNA primase large subunit [Wickerhamomyces ciferrii]
Length = 476
Score = 260 bits (665), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 153/442 (34%), Positives = 243/442 (54%), Gaps = 30/442 (6%)
Query: 19 STLPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEEMENLVRDLWKA---- 74
S L Y+ PQ E+ L+ FE++A+DR++VL I + R K +++E+ + L +
Sbjct: 33 SKLTFYQLPPQGEITLDQFEIWAIDRIKVLNEIESQIVRNKSYKDIESSILPLLQQQLPL 92
Query: 75 NMRHPEA-SEDVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKRALM 133
N +PE +D KD SHF+LRL + R+++LR F+ ET L + RF S + +++ +
Sbjct: 93 NSSNPEKLKQDRQKDYYSHFILRLCFARSKELRDKFIKNETILLKIRFQQLSQKDQQSFV 152
Query: 134 EEFDLPCKAISRTEFENAKEKL-EQVARSFDQPLPTADA----------IFYKVPFEEVP 182
+ +LP I++ E ++L + +A S L D F K+PFE V
Sbjct: 153 KSLNLPWDFITQDEKSKISDQLFKSIAPSLQYQLQLNDEHSKKQFFDNENFIKLPFEHVI 212
Query: 183 ELVAGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPI 242
+LV+ R +Y++KG+ Y+ Q + L+ ++ +L +L+ T + S E DRL PI
Sbjct: 213 DLVSSRSIYLYKGYGYIPQFQQLKLITNEYEKHLMDSLLTTAHAFPSL---DEDDRLLPI 269
Query: 243 VEALS----MSYLGPDY-SQTKEFGEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHG 297
++ LS +SY PD+ S + + SI + + + PLC L L HLK+
Sbjct: 270 LQHLSTNSNVSY-QPDFESNSSDITASSI--YSKKIQENLPLCGSQLMQGLHSTGHLKYI 326
Query: 298 GRMQLGLFLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTDYTPY 357
R Q LFLKG+GL ++ AL FW+ EFS+ + ++F KEY+Y+IRH+YGKEG R +Y P+
Sbjct: 327 ARQQFTLFLKGIGLNLDQALEFWQNEFSKSMSQDKFQKEYSYNIRHSYGKEGSRVNYKPW 386
Query: 358 SCQKIISST-PGVGDHHGCPYRHFSEENLRAALGRMGVGSRAMEDVVDKVRNRHYQLACT 416
C+ I+S P G+ HGCPYR S + L + LG MG+ ++ + D+V+ + ACT
Sbjct: 387 DCRTILSKPRPAKGEFHGCPYRDLSTDVLTSKLGNMGLENKDIMDIVEISTKGEFTNACT 446
Query: 417 LTFEAVHSSSCDAGINHPNQYF 438
E S + + HPN YF
Sbjct: 447 KVLEL--KSGINEVVVHPNLYF 466
>gi|150951386|ref|XP_001387702.2| DNA-directed DNA polymerase alpha, DNA primase subunit
[Scheffersomyces stipitis CBS 6054]
gi|149388551|gb|EAZ63679.2| DNA-directed DNA polymerase alpha, DNA primase subunit
[Scheffersomyces stipitis CBS 6054]
Length = 513
Score = 259 bits (663), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 155/473 (32%), Positives = 254/473 (53%), Gaps = 43/473 (9%)
Query: 21 LPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEEMENLVRDLWKANMRHPE 80
L Y P E+ LE+FE++A+DRL++L I ARGK E+E+ ++ + +
Sbjct: 37 LSFYDIPPLEEITLEEFEMWAIDRLKILIEIESGTARGKSAREIESSIKPMLMKYLPLNS 96
Query: 81 ASEDV----NKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKRALMEEF 136
+ D+ KD SH++LRLV+CR E+LRK F+ ET L++ R+ + + + +
Sbjct: 97 SGNDMLNERRKDHYSHYILRLVFCRNEELRKKFIKNETLLFKARYNALQPKEQHEFINHY 156
Query: 137 --DLPCKAISRTEFENAKEKLEQVARSFDQPLPTADA-----------------IFYKVP 177
L K I + E + L + + + D F K+P
Sbjct: 157 HDKLNWKYIDKDEKNALFDDLYAATGTVIRTMLMVDGGETISNDQLKQHIRVKENFIKLP 216
Query: 178 FEEVPELVAGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERD 237
FE+VP LVAGR++Y+ KG YV ++L+ +F+ +L+K L+ R + + R +E D
Sbjct: 217 FEKVPALVAGRQLYLSKGDVYVPSTLQLNLLAVEFQESLNKQLM---RTFQAIPRLEEDD 273
Query: 238 RLTPIVEALSMSYLGPDY----SQTKEFGEISIKDLDQLARSS-FPLCMRHLFDKLREDH 292
RL P++ L+ ++ + + + + +I + A + +PLC HL + +
Sbjct: 274 RLLPLLNHLANNFSSLQFDSYEADSTQASDIHAGSITTTAITKHYPLCATHLQRNMSHNS 333
Query: 293 HLKHGGRMQLGLFLKGVGLRMEDALAFWKAEFSQK---VGAERFDKEYAYSIRHNYGKEG 349
HLK+ GR QLGLFLKG+GL +++AL FW +F++ + E+F+KEY Y+IRH+YG EG
Sbjct: 334 HLKYTGRQQLGLFLKGIGLSVDEALKFWAYQFTKNGSGMTMEKFNKEYKYNIRHSYGLEG 393
Query: 350 KRTDYTPYSCQKIISS-TPGVGDHHGCPYRHFSEENLRAALGRMGVGSRA-MEDVVDKVR 407
RT+Y P+ C I+S PG G++HGCPYR S ++L + L MG+ ++ + V++ V
Sbjct: 394 GRTNYKPWDCATILSKPKPGKGEYHGCPYRDLSADSLVSNLNEMGISDQSEINTVLEDVN 453
Query: 408 NRHYQLACTLTFEAVH-------SSSCDAGINHPNQYFSDSHKILQPKNNNAA 453
R Y +ACT FE H ++ I+HPN YF S ++ + +N +
Sbjct: 454 RREYTVACTRVFELTHKEQMANQKNAEGLHISHPNLYFDRSRQLERGENKTSV 506
>gi|255729178|ref|XP_002549514.1| hypothetical protein CTRG_03811 [Candida tropicalis MYA-3404]
gi|240132583|gb|EER32140.1| hypothetical protein CTRG_03811 [Candida tropicalis MYA-3404]
Length = 503
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 163/472 (34%), Positives = 252/472 (53%), Gaps = 39/472 (8%)
Query: 14 PNDSVSTLPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEEMENLVRDLWK 73
P S L Y P E+ LE FE +A+DRL++L I LAR K +E+E+ V+ L
Sbjct: 31 PTLYTSRLSFYDLPPTQEITLEQFETWAIDRLKILIEIESCLARSKSLKEIESSVKPLLL 90
Query: 74 ANMR-HPEAS----EDVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEA 128
+ +P S E+ KD SHF+LRLV+CR+E+LRK F+ ET L++ R+ L +
Sbjct: 91 KYLPLNPNGSVNCIEERMKDHYSHFILRLVFCRSEELRKNFIKNETILFKVRYNLLQPKE 150
Query: 129 KRALME--EFDLPCKAISRTEFENAKEKLEQVARSFDQPLPTADAI-------------- 172
++ +E ++ LP K IS E + +L + + ++ +
Sbjct: 151 QQEFIELNQYRLPWKYISSEEKQKFLPQLINASGGSIRGQLLSEGVTNISNDQLRQHFIH 210
Query: 173 ---FYKVPFEEVPELVAGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTS 229
F K+PFE+V LV+ R +++HKG+ Y+ ++L+ +F+ LS LI R + +
Sbjct: 211 KENFIKLPFEKVTNLVSTRSIFLHKGYGYLPTSLQLNLLAIEFQEILSSNLI---RTFQT 267
Query: 230 TIREQERDRLTPIVEALSMSYLGPDYSQTKEFGEISIKDLDQLARSS----FPLCMRHLF 285
R +E DRL P++ LS ++ Y + IS + + S FPLC +L
Sbjct: 268 IPRLEEDDRLLPLLNNLSRNFANFQYESEIDPELISDINAKSVLTPSITKHFPLCATNLQ 327
Query: 286 DKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWKAEFSQ-KVGAERFDKEYAYSIRHN 344
L + HLK+GGR QLGLFLKG+GL +++AL +W +F++ + E F+KEY Y+IRH
Sbjct: 328 RNLIANSHLKYGGRQQLGLFLKGIGLNVDEALKYWSYQFTKNNMTLETFNKEYKYNIRHQ 387
Query: 345 YGKEGKRTDYTPYSCQKIIS--STPGVGDHHGCPYRHFSEENLRAALGRMGVGSRA-MED 401
YG EG R +Y P+ C I+S + HGCPYR F ++L ++L MGV + + +
Sbjct: 388 YGLEGARINYKPWDCSTILSKPKPANKNEFHGCPYRDFPIDSLVSSLNNMGVKDQQDLNN 447
Query: 402 VVDKVRNRHYQLACTLTFEAVHSSSCDAG----INHPNQYFSDSHKILQPKN 449
++D V Y +ACT FE HS + I HPN YF S ++ + +N
Sbjct: 448 IIDDVNKHDYTVACTRVFEITHSRNLTNKESLHITHPNLYFDRSRQLERSEN 499
>gi|156037748|ref|XP_001586601.1| hypothetical protein SS1G_12588 [Sclerotinia sclerotiorum 1980]
gi|154697996|gb|EDN97734.1| hypothetical protein SS1G_12588 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 446
Score = 257 bits (657), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 156/392 (39%), Positives = 232/392 (59%), Gaps = 33/392 (8%)
Query: 87 KDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKRALMEEFDLPCKAISRT 146
KD SHF+LRL + TEDLR+ F +E+ L+R RF + + ++A +E +L + +S
Sbjct: 54 KDHYSHFILRLAFASTEDLRRRFSRVESMLFRLRFQVDDLKGRQAFVEGLNLDWETVSEE 113
Query: 147 EFENAKEKLEQVARSFDQPLPTADAIFYKVPFEEVPELVAGRRVYIHKGHAYVAMHQVVS 206
E E+L+ A +D+ + + ++KV +E VPELV RRV++ G AYV + +S
Sbjct: 114 EKRENWEQLKGAA-GWDK-MRIEEESWFKVDWERVPELVESRRVFLRGGKAYVHSREQLS 171
Query: 207 LVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEALSMSYLGPD--YSQTK---EF 261
+VV +F + L KAL +T+R + R E DRLTPI+ LS ++ PD YS + +
Sbjct: 172 MVVAEFTNRLDKALEITSR---ALPRLDEDDRLTPILTHLSQNFTTPDANYSGSATAVDG 228
Query: 262 GEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWK 321
+IS +++D L+ SSFPLCM++L LR D HLKH GR+Q LFLKG+GL +E+ L FW+
Sbjct: 229 ADISARNIDVLS-SSFPLCMQNLHRSLRRDAHLKHYGRLQYTLFLKGIGLNLEECLVFWR 287
Query: 322 AEFSQKVGAERFDKEYAYSIRHNYGKEGKRTD-----YTPYSCQKIISS-TPGVGDHHGC 375
+ FS K+ + F+KEY Y++RH YG G ++ Y+P+SCQKI++ PG G+ HGC
Sbjct: 288 SSFS-KITDDVFNKEYRYNVRHAYGDVGGDSNRRGNGYSPFSCQKILTEHPPGPGESHGC 346
Query: 376 PYRHFSEENLRAALGRMGVGSR-AMEDVVDKVRNRHYQLACTLTFEAVHSSSC----DAG 430
PYRHFS +NL + L +GV + + V + + + LAC FE H D G
Sbjct: 347 PYRHFSVDNLTSLLRAVGVNDQEVLRGVKEDKEKQKFHLACNRVFEYAHKQEIKKVKDNG 406
Query: 431 ---------INHPNQYFSDSHKILQPKNNNAA 453
I HPN+YF S+ +L+ + N A
Sbjct: 407 TWEAAQLETIVHPNEYFKRSY-LLKNMDKNPA 437
>gi|170088278|ref|XP_001875362.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164650562|gb|EDR14803.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 490
Score = 257 bits (657), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 154/460 (33%), Positives = 250/460 (54%), Gaps = 42/460 (9%)
Query: 21 LPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEEMENLVR-------DLWK 73
L Y AP ++ +E+FE A+DRLR+L I + AR + EE++ + L
Sbjct: 31 LNFYDDAPLFDISIEEFETAAIDRLRILAEIESSAARNRTWEELKTVTNAQCVKYLPLNS 90
Query: 74 ANMRHPEASEDVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKRALM 133
++ + + KD + HF+LRL +CR+EDLR+ F+ ET L++ R+ + +
Sbjct: 91 NTAKNNDIESERRKDHLGHFILRLAFCRSEDLRRRFIKAETTLFKVRYEGDVFSEREQFL 150
Query: 134 EEFDLPCKAISRTEFENAKEKLEQVARSF-------DQPLPTADAIFYKVPFEEVPELVA 186
D +++ E +E ++ S+ ++ +YKV + VP+LV
Sbjct: 151 SSRDFNWVPVTKAE---KQEHWNELLSSYYGSKIEAERKKAFESEKYYKVKWTRVPDLVE 207
Query: 187 GRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEAL 246
RRV++ G A+V + S++ +F ++ KAL +T R R E RL PI++ L
Sbjct: 208 KRRVFLAGGWAFVPGREQSSIIYHEFEVHIEKALEMTARMLP---RLDEDTRLMPILDNL 264
Query: 247 SMSYLGPDYSQTKEFG-----EISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQ 301
S +L S+ E+ + +D L++ FP+CM+ L D L D+HLKH GR+Q
Sbjct: 265 SQGFLAGISSEWSNPAGENPDELKAEMIDDLSKKHFPMCMKTLHDNLMRDNHLKHFGRLQ 324
Query: 302 LGLFLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQK 361
GLFLK +GL +E+A+ FW+ FS ++ ++F+KE+ Y+IRH+YG EGKR +Y SC +
Sbjct: 325 YGLFLKVLGLPIEEAIVFWRKSFS-RMTDDKFNKEHKYNIRHSYGLEGKRANYPAKSCLQ 383
Query: 362 IISSTPGVGDHHGCPYRHFSEENLRAAL----GRMGVGSRAMEDVVDKVRNRHYQLACTL 417
I+ TPG D HGCPYRH+S ENL++AL + G+ S + +++ +V+ H+ +ACT
Sbjct: 384 IL--TPGPSD-HGCPYRHYSAENLQSALLSTYSQSGLTSADLPEIMAQVKAGHFHVACTR 440
Query: 418 TFEAVHS---------SSCDAGINHPNQYFSDSHKILQPK 448
FE HS + HPNQY + S ++ +P+
Sbjct: 441 VFEITHSFRGVKKGEGIGGGESVTHPNQYAARSMELDKPQ 480
>gi|212539968|ref|XP_002150139.1| DNA primase large subunit [Talaromyces marneffei ATCC 18224]
gi|210067438|gb|EEA21530.1| DNA primase large subunit [Talaromyces marneffei ATCC 18224]
Length = 501
Score = 257 bits (656), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 164/459 (35%), Positives = 243/459 (52%), Gaps = 45/459 (9%)
Query: 21 LPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEEMENLVRDLWK------- 73
L Y P E+ LE+FE +A+DRL+VL I R K P+E E + + K
Sbjct: 38 LNFYDVPPTAEITLEEFEQWAIDRLKVLAEIEACSYRNKTPQETEAHIAPVLKKYLNLSS 97
Query: 74 -----ANMRHPEASEDVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEA 128
+ + + KD SHF+LRL + TE+LR F+ ET L+++RF S+
Sbjct: 98 NSSASGGVISQQLRNERQKDHYSHFILRLAFSATEELRHRFVRAETMLFKFRFGKDDSKE 157
Query: 129 KRALMEEFDLPCKAISRTEFENAKEKLEQVARSFDQPLPTADAIFYKVPFEEVPELVAGR 188
+R+ +E +L + +S E E EQ+ S D ++KV +E+VPEL+ R
Sbjct: 158 RRSFIESLNLNWEPVSD---EERSELAEQLVASTPGLRRAEDEAWFKVDWEKVPELIERR 214
Query: 189 RVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEALSM 248
V+I KG AYV + +S+++ F + L KA+ LT+R + R E DRLTPI+ LS
Sbjct: 215 VVFIRKGKAYVPQREQLSMIIADFTARLEKAMELTSR---ALPRLDEDDRLTPILNHLSK 271
Query: 249 SYLGPD--YSQTK---EFGEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLG 303
++ + YS+ + + I+ +D L++ FPLCMR L LR+++HLKH GR+Q
Sbjct: 272 NFGSAESVYSEGEGVVDGAPITAASIDPLSQH-FPLCMRSLHMTLRKNNHLKHFGRLQYT 330
Query: 304 LFLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTD-----YTPYS 358
LFLKG+GL +++ + FW+ F + + F+ +Y Y+IRH+YG G + Y PYS
Sbjct: 331 LFLKGIGLSLDECILFWRQSF-KGFSDDEFNSKYKYNIRHSYGDVGGDANRRGRGYPPYS 389
Query: 359 CQKIIS-STPGVGDHHGCPYRHFSEENLRAALGRMGVGSR-AMEDVVDKVRNRHYQLACT 416
CQ+I+S S P G HGCPYRHFS +NL A L GV + + V + V + Y +AC
Sbjct: 390 CQRILSESAPSTGQTHGCPYRHFSVDNLTALLQSTGVHDKDLLRGVREDVGKQKYHIACN 449
Query: 417 LTFEAVHSSSCD-------------AGINHPNQYFSDSH 442
FE H + I HPN YF S+
Sbjct: 450 RVFEWTHKADIKRVKEDGSWSQTDLDTIVHPNTYFKRSY 488
>gi|452824415|gb|EME31418.1| DNA primase large subunit [Galdieria sulphuraria]
Length = 488
Score = 257 bits (656), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 163/475 (34%), Positives = 250/475 (52%), Gaps = 54/475 (11%)
Query: 10 RTNTPNDSVSTLP-LYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEEMENLV 68
+TN ++ P Y + P E +E A RL++L+ I +RG +E+ + +
Sbjct: 15 KTNNKRHFLANKPQFYLHCPSTEAPIESLWEIAAQRLQLLQEIDKLRSRGASFQELTSAI 74
Query: 69 RDLWKANMRHPE--ASEDV---------NKDIISHFVLRLVYCRTEDLRKWFLSMETALY 117
+ E + E++ ++D++SH++LRL +C+ ++ + WFL ET L+
Sbjct: 75 EKFLFLRRQQNEYYSYENIITDRLYDTESRDVLSHYLLRLAFCKQQNAQAWFLQNETVLF 134
Query: 118 RYRFLLGSSEAKRALMEEFDLPC--KAIS-RTEFENAKEKLE--QVARSFDQPLPTA-DA 171
++R L+++ + IS R +N + E Q+ Q LP++
Sbjct: 135 QWRLENSPPTQIDTLIDQLQAVWSDEEISLRKVVKNLDQDPEFAQLYHRLYQKLPSSMTL 194
Query: 172 IFYKVPFEEVPELVAGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTI 231
+ Y+VPFE+VPEL+ R V I G+AY+ Q+ S +V++FRS LSK L + RK
Sbjct: 195 LLYQVPFEQVPELLRHRSVIIRSGYAYLFSEQLTSFLVSRFRSVLSKGLGVL-RKMEHFA 253
Query: 232 REQERDRLTPIVEAL--SMSYLGPDYSQTKEFGEISIKDLDQLARS-----------SFP 278
EQE+ L ++E+L S + +F S+KD + L ++ P
Sbjct: 254 EEQEQ--LNLLLESLRESQKFF------VNQFSSYSLKDAENLEKAIHLEDLPQAMFHMP 305
Query: 279 LCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWKAEFSQK-VGAERFDKEY 337
LCM L +L ++HHLKHG R+QLGLFLK GL M+++L FWK EFS+ + +++FDKEY
Sbjct: 306 LCMFRLMKRLEQNHHLKHGARLQLGLFLKDCGLSMDESLHFWKTEFSKGGISSDKFDKEY 365
Query: 338 AYSIRHNYGKEGKRTDYTPYSCQKIISSTPGVGDHHGCPYRHFSEENLRAALGRMGV--- 394
AY+IRH+YG+EGKR YTP+SC KII P + HGCP+R + +L L GV
Sbjct: 366 AYAIRHHYGREGKRASYTPFSCMKIIQQRPSAHEEHGCPFRELNSASLDTLLQTYGVEEA 425
Query: 395 GSRAMEDVVDKVRNRHYQLACTLTFE--------AVHSSSCDAGINHPNQYFSDS 441
G RA +V K + H+Q+AC +T + A S HPN YF DS
Sbjct: 426 GCRA--SIVQKAQEGHFQVACGMTMQMKKTGQQIATSSEEFSPTTTHPNHYFFDS 478
>gi|400598523|gb|EJP66232.1| eukaryotic and archaeal DNA primase [Beauveria bassiana ARSEF 2860]
Length = 504
Score = 256 bits (655), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 168/457 (36%), Positives = 239/457 (52%), Gaps = 40/457 (8%)
Query: 21 LPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEEMENLVRDLWKANMRHPE 80
L Y P ++ LE FE +A+DRLRVL + R K P E ++ + + +
Sbjct: 38 LNFYADPPTADITLEQFEQWAIDRLRVLAELEACSFRNKSPAETALHMKPILEKYLPLDS 97
Query: 81 ASEDVNK-------DIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKRALM 133
S K D SHF+LRL + TEDLR+ F +ET L+R RF S + A +
Sbjct: 98 NSSGSTKLAAQRQKDHYSHFILRLAFSSTEDLRRRFARVETMLFRIRFNNDSLADRSAFV 157
Query: 134 EEFDLPC-KAISRTEFENAKEKLEQVARSFDQPLPTA--DAIFYKVPFEEVPELVAGRRV 190
+ +S E +L +A ++ + + D +++V +E VPELV GRRV
Sbjct: 158 AGLNFDWWHPVSDEEKRKYAAELAAMAGTYQKNGSGSAEDEGWFRVDWERVPELVEGRRV 217
Query: 191 YIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEALSMSY 250
++ G A+V + + S+VV +F + L K L LT R + R E DRLTPI+ LS ++
Sbjct: 218 FLKAGKAFVPVREQSSMVVAEFTTRLEKQLALTAR---ALPRLDEDDRLTPILNHLSKNF 274
Query: 251 LGPDY-----SQTKEFGEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLF 305
PD + + IS +D L++ FP CM HL LR D HL+H GR+Q LF
Sbjct: 275 TTPDSAYMSNTAAPDGAVISAARIDHLSQH-FPACMSHLHKSLRRDAHLRHYGRLQYTLF 333
Query: 306 LKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTD-----YTPYSCQ 360
LKG+GL +E+ALAFW+ F KV + F+KEY Y++RH YG G ++ Y+P SCQ
Sbjct: 334 LKGIGLSLEEALAFWRGAF-HKVTDDTFNKEYRYNVRHAYGDVGGDSNRRGGGYSPLSCQ 392
Query: 361 KI-ISSTPGVGDHHGCPYRHFSEENLRAALGRMGVGSRA-MEDVVDKVRNRHYQLACTLT 418
KI + PG + HGCPYRHF+ ENL A + MGV R ++ V + + Y +AC
Sbjct: 393 KILLEHPPGPNEAHGCPYRHFNLENLTALVQSMGVNDRGVLQGVKEDKDTQKYHMACNRV 452
Query: 419 FEAVHSSSC----DAGIN---------HPNQYFSDSH 442
FE +H D GI HPN+YF S+
Sbjct: 453 FEHLHKKEIQKAKDEGIMTANQLETIVHPNEYFKRSY 489
>gi|383849812|ref|XP_003700530.1| PREDICTED: DNA primase large subunit-like [Megachile rotundata]
Length = 474
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 148/457 (32%), Positives = 240/457 (52%), Gaps = 31/457 (6%)
Query: 8 RSRTNTPNDSVST------LPLYRYAPQLEVRLEDFEVFAMDRLRVLKGIS--------- 52
R N N+ +S L +Y P V+LE+ + + ++RL++LK +
Sbjct: 13 RDEINVKNNQISNNMYLHNLQMYSIPPSGYVKLEELQEWCVNRLKLLKLVKQISVQNYKR 72
Query: 53 ------DALARGKRPEEMENLVRDLWKANMRHPEASEDV--NKDIISHFVLRLVYCRTED 104
+AL + ++ N ++ + + + E ++ D +SHF+LR +
Sbjct: 73 SFKHCLNALIKELEGNDLHNFLKLISTPDCQLQETNKQSLRRNDCMSHFLLRAAFSFEHR 132
Query: 105 LRKWFLSMETALYRYRFLLGSSEAKRALMEEFDLPCKAISRTEFENAKEKLEQVARSFDQ 164
R+WF E L+++R E + + DL IS E +N KE LE D
Sbjct: 133 KRQWFFEQEVNLFKWRCSSLDEENMKTFITTHDLQFPFISEVEKQNIKEDLEISCPDKD- 191
Query: 165 PLPTADAIFYKVPFEEVPELVAGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTN 224
D FYK F +V LV R+V++ G AYV ++ L++++F+ L+ L
Sbjct: 192 ---IKDVKFYKAHFTKVLSLVKRRQVFLQNGIAYVPETKIWCLILSKFKKILNDGF-LYG 247
Query: 225 RKWTSTIREQERDRLTPIVEALSMSYLGPDYSQTKEFGEISIKDLDQLARSSFPLCMRHL 284
R+ S ER +T I+ AL + + + +F E++I +LD+L+R+S+PLCMR L
Sbjct: 248 REMASNAYNDER--ITNILAALPKC-INTTHFKYNKFREVTISELDELSRTSYPLCMRIL 304
Query: 285 FDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHN 344
+ L+ +HHL +GGR+Q LFLKG+GL + DAL FWK EF++K+ F+KEY Y IRH
Sbjct: 305 HEALKTNHHLTNGGRVQYCLFLKGIGLNLGDALKFWKDEFTKKINEVTFNKEYKYHIRHL 364
Query: 345 YGKEGKRTDYTPYSCQKIISSTPGVGDHHGCPYRHFSEENLRAALGRMGVGSRAMEDVVD 404
YG EG++ +Y P+ C KI +ST G+ D+HGCP++H + + LR L + G+ + ++ +V
Sbjct: 365 YGMEGRQANYEPFHCTKIFNSTVGLRDNHGCPFKHMTHDVLRKTLFKCGLVHQDVKSIVQ 424
Query: 405 KVRNRHYQLACTLTFEAVHSSSCDAGINHPNQYFSDS 441
+ Y AC +E H+ + +HPN YF S
Sbjct: 425 LSKEGSYLQACKNYYEITHNCITEKSFDHPNVYFDYS 461
>gi|302897407|ref|XP_003047582.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256728513|gb|EEU41869.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 508
Score = 256 bits (653), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 165/462 (35%), Positives = 245/462 (53%), Gaps = 48/462 (10%)
Query: 21 LPLYRYAPQLEVRLEDFEVFAMDRLR--------VLKGISDALARGKRPEEMENLVRDLW 72
L Y P ++ LE FE +A+DRLR VL + R K P E ++ +
Sbjct: 38 LNFYTDPPTADITLEQFEQWAIDRLRGKFFTSEAVLAELEACSFRNKSPAETATHMKPIL 97
Query: 73 KANMR---HPEASEDV----NKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGS 125
K + + S + KD SHF+LRL + TEDLR+ F +ET L+R R
Sbjct: 98 KKYLNLEANSSGSTKIFAQRQKDHYSHFILRLAFASTEDLRRRFTRVETMLFRLRLNDDD 157
Query: 126 SEAKRALMEEFDLP-CKAISRTEFENAKEKLEQVARSFDQPLPTADAIFYKVPFEEVPEL 184
+ A ++ L C+ + TE + + E A S + D ++KV +E VPEL
Sbjct: 158 LAERSAFVKTLGLDWCEDV--TEDDRREYAAELAAFSSGRKGDAEDDSWFKVDWERVPEL 215
Query: 185 VAGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVE 244
+ RRV++ G A+V + +V+ +F S L + L LT R + R E DRLTPI+
Sbjct: 216 IESRRVFLKAGKAFVPGREQTGMVIGEFSSRLERQLELTAR---ALPRLDEDDRLTPILN 272
Query: 245 ALSMSYLGPDYSQTKEFG-----EISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGR 299
LS +++ PD + + IS ++D L++ FP CM HL LR D HLKH GR
Sbjct: 273 HLSKNFITPDSAYSSNTAAVPGAHISAANIDNLSQH-FPACMSHLHRSLRRDAHLKHYGR 331
Query: 300 MQLGLFLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTD-----Y 354
+Q GLFLKG+GL +E++L FW++ F K+ + F+K+Y Y++RH YG G ++ Y
Sbjct: 332 LQYGLFLKGIGLNLEESLMFWRSSF-HKITDDTFNKDYRYNVRHIYGDVGGDSNRRGGGY 390
Query: 355 TPYSCQKIISS-TPGVGDHHGCPYRHFSEENLRAALGRMGVGSRAMEDVVDKVRNRH-YQ 412
+P+SCQKI++ PG G+ HGCPYRHFS ENL A + MGV R++ + + +++ Y
Sbjct: 391 SPFSCQKILTEHPPGPGEAHGCPYRHFSLENLTALVQSMGVNDRSVIQGIKEDKDKQKYH 450
Query: 413 LACTLTFEAVHSSSC----DAGIN---------HPNQYFSDS 441
+AC FE +H + D G+ HPN+YF S
Sbjct: 451 MACNRVFEYLHKAEMKKAKDEGVMTQNQLETMVHPNEYFKRS 492
>gi|407923588|gb|EKG16657.1| DNA primase large subunit eukaryotic/archaeal [Macrophomina
phaseolina MS6]
Length = 509
Score = 256 bits (653), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 168/462 (36%), Positives = 244/462 (52%), Gaps = 53/462 (11%)
Query: 21 LPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEEMENLVRDLWKANM---- 76
L Y P E+ LE+FE +A+ RL+VL + R + PEE + + + + +
Sbjct: 38 LNFYTLPPTTEITLEEFEEWAIARLKVLSELESCSFRNRSPEETASYMAPILEKYLPLHS 97
Query: 77 ---RHPEASEDVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKRALM 133
R + KD SHF+LRL + TEDLR+ F +ETAL+R R+ + +R +
Sbjct: 98 NSSRSSTLDAERKKDHYSHFILRLAFSATEDLRRRFARLETALFRLRWREDDARERREFV 157
Query: 134 EEFDLPCKAISRTEFENAKEKLEQVARSFDQPLPTADAIF---------YKVPFEEVPEL 184
+ + + TE E K +L Q D TA A F +KV +E+VPEL
Sbjct: 158 DSLAMGGEWEKVTEEE--KRELGQ-----DLINATAGAGFGKRIEEEGWFKVEWEKVPEL 210
Query: 185 VAGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVE 244
V R+V + +G AYV + + SLV+ ++ L AL LT+R + R E DRL+PI+
Sbjct: 211 VESRKVLVKRGVAYVPVREQASLVIAEYTRRLDDALELTSR---ALPRLDEDDRLSPILS 267
Query: 245 ALSMSYLGPDYSQTKE-----FGEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGR 299
LS ++ PD + T + + +D L++ FPLCM+HL LR++ HLKH GR
Sbjct: 268 HLSNNFTAPDTTYTSDTSIDGLSAPTAASVDALSKH-FPLCMQHLHRTLRQNSHLKHFGR 326
Query: 300 MQLGLFLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTD-----Y 354
+Q LFLKG+GL +E+ L FW+ F + + E+F+KEY Y++RH YG G + Y
Sbjct: 327 LQYTLFLKGIGLSLEECLIFWRRSF-KLMTDEKFNKEYRYNVRHAYGDVGGDANRRGRGY 385
Query: 355 TPYSCQKIISST-PGVGDHHGCPYRHFSEENLRAALGRMGVGSRA-MEDVVDKVRNRHYQ 412
TPYSCQK+ + PG G HGCPYR F+ +NL A L ++GV A ++DV + VR + Y
Sbjct: 386 TPYSCQKLTTEPLPGPGQTHGCPYRTFAPDNLVAMLQQVGVNDGAVLKDVREDVRRQRYH 445
Query: 413 LACTLTFEAVHSSSCDA-------------GINHPNQYFSDS 441
+AC FE H I HPN+YF S
Sbjct: 446 IACNRVFEWKHKGEIKKVKEEGTWGAADMDTILHPNEYFKRS 487
>gi|344233514|gb|EGV65386.1| hypothetical protein CANTEDRAFT_119727 [Candida tenuis ATCC 10573]
gi|344233515|gb|EGV65387.1| DNA primase, large subunit [Candida tenuis ATCC 10573]
Length = 502
Score = 254 bits (649), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 156/473 (32%), Positives = 241/473 (50%), Gaps = 53/473 (11%)
Query: 18 VSTLPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEEMENLVRDLWKANM- 76
S L Y P E+ LE+FE +A+DRL+VL I AR K +E+E +++ + +
Sbjct: 32 TSRLSFYDIPPLEEITLEEFESWAIDRLKVLIEIESCTARSKSFKEIEQIIKPVVNKYLP 91
Query: 77 --------RHPEASEDVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRF------- 121
+ ++ KD SH++LRLV+CRT++LRK F+ E L++ R+
Sbjct: 92 LSPLIEGKNDAQVLQERKKDHYSHYILRLVFCRTDELRKKFVKNEMLLFKIRYGNMQLSE 151
Query: 122 ---------------LLGSSEAKRALMEEFDLPCKAISRTEFENAKEKLEQVARSFDQPL 166
+G+ E K L E+ A RT+ EK Q +
Sbjct: 152 KSQFIELHNDTLDWNYIGAEE-KTELFEDLFNATSASIRTQMMLDNEKSTITGEQLRQHI 210
Query: 167 PTADAIFYKVPFEEVPELVAGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRK 226
++ F K+PFE++P LV R + + +G+ Y+ ++L+V + + NLSK L+ T
Sbjct: 211 LRNES-FIKLPFEKIPNLVGSRSILVRQGYGYIPTSFQLNLLVIEVQENLSKNLVKT--- 266
Query: 227 WTSTIREQERDRLTPIVEALSMSYLGPDYSQTKEFGEISIKDLDQLARSS------FPLC 280
+ + R E DRL P+++ALS ++ Y FG+ S D++ + +S +PLC
Sbjct: 267 FQAIPRLDEDDRLVPLLQALSKNFSSVQYDSN--FGDESASDINATSITSNKIMSHYPLC 324
Query: 281 MRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWKAEFSQ---KVGAERFDKEY 337
+ L L +HHL+ GR QL LFLKG+GL +++AL FW +F+ + E+F+KEY
Sbjct: 325 AKVLQKSLVANHHLRFQGRQQLSLFLKGIGLNVDEALRFWSTQFTSGNTGISLEKFNKEY 384
Query: 338 AYSIRHNYGKEGKRTDYTPYSCQKIISS-TPGVGDHHGCPYRHFSEENLRAALGRMGVGS 396
Y+IRH+YG EG R +Y P+ C I+S P + HGCPYR E L L MG+
Sbjct: 385 KYNIRHSYGLEGARINYKPWDCATILSKPKPNKSESHGCPYRDLKLEVLVDNLKDMGITE 444
Query: 397 RA-MEDVVDKVRNRHYQLACTLTFEAVHSSSCDAG----INHPNQYFSDSHKI 444
++ + ++D V Y +ACT FE H INHPN YF S ++
Sbjct: 445 QSDLNVIIDDVNKNSYTVACTRVFELTHKKQLKPNENLHINHPNLYFDRSRQL 497
>gi|344305522|gb|EGW35754.1| hypothetical protein SPAPADRAFT_131134 [Spathaspora passalidarum
NRRL Y-27907]
Length = 499
Score = 254 bits (648), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 154/467 (32%), Positives = 245/467 (52%), Gaps = 45/467 (9%)
Query: 19 STLPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEEMENLVRDLWKANMRH 78
S L Y P E+ LE FE++A+DRL++L I AR K +E+E ++ L +
Sbjct: 33 SRLSFYDIPPMSEITLEQFEMWAIDRLKILIEIESCQARSKSLKEIETSIKPLLLKYLPL 92
Query: 79 PEASEDVN----KDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKRALME 134
+ E++ KD SH++LRLV+CR+EDLRK F+ ET L++ R+ L + ++ +E
Sbjct: 93 SPSGENIEQERIKDHYSHYILRLVFCRSEDLRKKFIKNETTLFKVRYNLLQPKEQQEFIE 152
Query: 135 EFD--LPCKAISRTEFENAKEKLEQVA-----------------RSFDQPLPTADAIFYK 175
++ L IS E + ++L Q L + F K
Sbjct: 153 LYNDRLSWNYISANEKQEVFDQLYAACGLTIKNHLLVEGENLNNEQLRQHLLVKEN-FIK 211
Query: 176 VPFEEVPELVAGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQE 235
+PFE+ LV R +++ G+ Y+ ++L+ +F+ NL++ L+ T + + R +E
Sbjct: 212 LPFEKCANLVGSRSIFLRNGYGYLPSSLQLNLLAIEFQENLNQILLQT---FHTIPRLEE 268
Query: 236 RDRLTPIVEALSMSYLGPDYSQTKEFGEISIKDLDQLARSS------FPLCMRHLFDKLR 289
DR+ P++ +S ++ Y D++ + ++ +PLC +HL + L
Sbjct: 269 DDRILPLLNNMSRNFANIQYDSGYNQDPALASDINAQSVTTDTITQHYPLCAKHLQNTLV 328
Query: 290 EDHHLKHGGRMQLGLFLKGVGLRMEDALAFWKAEFSQK--VGAERFDKEYAYSIRHNYGK 347
+ HLK+ R QLGLFLKG+GL +++A+ FW +F++ + E+F+KEY Y+IRH YG
Sbjct: 329 ANSHLKYNARQQLGLFLKGIGLSVDEAVKFWSYQFTKSGVMSQEKFNKEYKYNIRHQYGL 388
Query: 348 EGKRTDYTPYSCQKIISS-TPGVGDHHGCPYRHFSEENLRAALGRMGV-GSRAMEDVVDK 405
EG R +Y P+ C I S PG G+ HGCPYR FS ++L L MG+ + + +V+D
Sbjct: 389 EGARINYKPWDCAIIYSKPNPGRGEAHGCPYRDFSLDSLVNNLQEMGITDQQELNNVIDD 448
Query: 406 VRNRHYQLACTLTFEAVHSSS-CDAG-------INHPNQYFSDSHKI 444
V R Y +ACT FE H AG INHPN YF S ++
Sbjct: 449 VNKRDYTIACTRVFELTHKKQLATAGAKMEGLHINHPNLYFDRSRQL 495
>gi|308809185|ref|XP_003081902.1| Eukaryotic-type DNA primase, large subunit (ISS) [Ostreococcus
tauri]
gi|116060369|emb|CAL55705.1| Eukaryotic-type DNA primase, large subunit (ISS) [Ostreococcus
tauri]
Length = 511
Score = 253 bits (646), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 163/487 (33%), Positives = 251/487 (51%), Gaps = 46/487 (9%)
Query: 4 VRSQRSRTNTPNDSVSTLPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEE 63
V +R+R+ ++ + L Y P E ++ E A DR +L+ I DA + GK+ EE
Sbjct: 14 VAQERARSKYTGNA-ARLDAYATPPTEERSIDYLERCASDRYALLRAIDDARSGGKKDEE 72
Query: 64 MENLVRDLWK------ANMRHPEASEDVNKDIISHFVLRLVYCRTEDLRKWFLSMETALY 117
++ ++R+ + N R E+ ++D HF+LRL E+ +WF+ E L+
Sbjct: 73 LKKVIREEEERREMRRTNGRGEFDEENASRDATGHFLLRLASSLKEEHERWFVENELELF 132
Query: 118 RYRFLLGSSEAKRALMEE--FDLPCKAISRTEFENAKEKLEQVARSFDQPLPTADAI--- 172
+YRF S K + M+ FD A R E+ E + + F+ DA
Sbjct: 133 KYRFGELSESGKESFMKTNGFDDYGAASERDVQEHKNELRDVLMADFEFRKALKDASVNN 192
Query: 173 -------------------FYKVPFEEVPELVAGRRVYIHKGHAYVAMHQVVSLVVTQFR 213
++ V FEEV LV RR Y+ G A++ + LV +FR
Sbjct: 193 LKLGEFERKCAEEARNAKNWFVVGFEEVSPLVRTRRAYLIGGRAWIRKETLDQLVFGRFR 252
Query: 214 SNLSKALILTNRKWTSTIREQERDRLTPIVEALSMSYLGPDYSQTKEF---GEISIKDLD 270
+ LS + ++ E +RL P++ A+ G Y + + G +SI ++
Sbjct: 253 TRLSLGMKKA-KELFKQFEVAEANRLAPLLRAVHNKRSGRAYEGRRAYEGEGTMSISGIE 311
Query: 271 QLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWKAEFSQK--V 328
Q + SFPLCMR L + L++ HHL HGGR Q L+LKG+GL ++ AL FWK EF++
Sbjct: 312 Q-TQDSFPLCMRQLHNALKKKHHLTHGGRRQYQLYLKGIGLPLDQALVFWKTEFTKSPDC 370
Query: 329 GAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQKIISSTPGVGDHHGCPYRHFSE------ 382
AE+F+K+Y+Y IRH YG+EGKR +YTP+SC + I++TPG D HGCP+R +
Sbjct: 371 SAEKFEKDYSYGIRHAYGREGKRVNYTPHSCGQCINATPGEKDSHGCPFRTMTSGGNKNG 430
Query: 383 ENLRAALGR-MGVGSRAMEDVVDKVRNRHYQLACTLTFEAVHSSS-CDAGINHPNQYFSD 440
E L L + M + +VDK + HYQ+AC +TF A+H +AG++ P+QYF +
Sbjct: 431 EALHELLTKSMKIPEDGSIKIVDKAKGMHYQIACGMTFAALHDGKEIEAGVHTPHQYFHE 490
Query: 441 SHKILQP 447
S I+ P
Sbjct: 491 SRNIIAP 497
>gi|164662481|ref|XP_001732362.1| hypothetical protein MGL_0137 [Malassezia globosa CBS 7966]
gi|159106265|gb|EDP45148.1| hypothetical protein MGL_0137 [Malassezia globosa CBS 7966]
Length = 506
Score = 251 bits (642), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 156/467 (33%), Positives = 237/467 (50%), Gaps = 50/467 (10%)
Query: 21 LPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEEMENLVR----------- 69
L +Y P ++ +++FE +A+DRL +L I +A AR + E + +
Sbjct: 36 LNMYAVPPVQDITVDEFEQWALDRLHILSEIENASARNQSWAETKMAIEKRMNEYMPLRS 95
Query: 70 -------DLWKANMRHPEASEDVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFL 122
+ + + E + KD ISHFVLRL + R+E+LR+ F+ E L+R++
Sbjct: 96 NAVAQSGSMTTSTAKTKELLAERRKDHISHFVLRLAFSRSEELRRRFVHAECTLFRWKLE 155
Query: 123 LGSSEAKRALMEEFDLPCKAISRTEFENAKEKLEQVARSFDQPLPTADAIFYKVPFEEVP 182
+ A + D + + + +E+L V + + F +VP+ VP
Sbjct: 156 TEHLAEREAFLHSQDFVWRMVPPEDQHRFREQLAAVHPRLGSSVESES--FVQVPWYRVP 213
Query: 183 ELVAGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPI 242
+LV R+V++HKG A++ + SLV+ +F+ L L LT R + R E DRL P+
Sbjct: 214 DLVEKRKVFVHKGTAWIPTREQASLVLAEFQGRLQTQLELTAR---ALPRLDEDDRLMPV 270
Query: 243 VEALSMSYLGPDYSQTKEFGEISIKDLD------------QLARSSFPLCMRHLFDKLRE 290
+E LSM G +KE+G ++ D L R PLCMRHL L
Sbjct: 271 LEHLSM---GSMLGMSKEYGTSALVSTDGEALSLTADMVVPLVREHAPLCMRHLQSVLWT 327
Query: 291 DHHLKHGGRMQLGLFLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGK 350
HHL+H R+Q LFLK +GL +E+AL FW+ FS + ++F KE+ Y+IRH YG EG+
Sbjct: 328 THHLRHYSRLQYNLFLKELGLPVEEALLFWRRSFS-TMSDDKFAKEHRYNIRHGYGLEGR 386
Query: 351 RTDYTPYSCQKIISS-TPGVGDHHGCPYRHFSEENLRAAL-GRMGVGSRAMEDVVDKVRN 408
R +Y SC +II+ PG D HGCP+RHFS+ENL AAL G+G D++ +
Sbjct: 387 RVNYPAKSCARIITQDPPGPQDTHGCPFRHFSQENLSAALTAHYGLGPSEQADILAAAKA 446
Query: 409 RHYQLACTLTFEAVHSSSC---------DAGINHPNQYFSDSHKILQ 446
HY +ACT FE H + ++HPN+Y S ++ Q
Sbjct: 447 GHYHVACTRVFELTHKAQGVTPGDGLGQGESVSHPNRYTEASWRLAQ 493
>gi|346979745|gb|EGY23197.1| DNA primase large subunit [Verticillium dahliae VdLs.17]
Length = 511
Score = 251 bits (641), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 170/461 (36%), Positives = 243/461 (52%), Gaps = 44/461 (9%)
Query: 21 LPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEEMENLVRDLWKANMRHPE 80
L Y AP ++ LE FE +A+DRLR+L + R K P E+ + ++ L + +
Sbjct: 38 LNFYADAPTADITLEQFEQWAIDRLRILAELEACSFRNKPPAEVASHMKPLLEKLLPLEL 97
Query: 81 ASEDV-------NKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKRALM 133
+S KD SHF+LRL + TEDLR+ F +ET L+R RF + A +
Sbjct: 98 SSSQSSQLFAQRQKDHYSHFILRLAFASTEDLRRRFSRVETMLFRLRFNSDDLADRNAFV 157
Query: 134 EEFDLPCKAISRTEFENAKEKLEQVARSFDQPLPTA-----DAIFYKVPFEEVPELVAGR 188
+L + TE E A E A + + D ++KV + VPELV R
Sbjct: 158 AGLELDWWE-TVTEDERAALSSELAAMMPARAKASGSHNPEDETWFKVDWARVPELVEQR 216
Query: 189 RVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEALSM 248
RV + G AYV + S+V+ +F L K L LT R + R E DRLTPI++ LS
Sbjct: 217 RVLLRAGKAYVPAREQASMVLGEFTQRLEKQLELTAR---ALPRLDEDDRLTPILDHLSK 273
Query: 249 SYLGPDYS----QTKEFG---EISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQ 301
+++ PD + T G ++S +++D LA + FP CM HL LR D HLKH GR+Q
Sbjct: 274 NFITPDSAYLSGTTSAAGLGADMSARNVDTLAAAHFPACMAHLHRSLRRDAHLKHYGRLQ 333
Query: 302 LGLFLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEG-----KRTDYTP 356
LFLKG+GL +E+ L FW+ F + V + F+KEY Y++RH YG G + Y+P
Sbjct: 334 YTLFLKGIGLSLEECLLFWRQGF-RNVTDDVFNKEYRYNVRHVYGDVGGDAIRRGGGYSP 392
Query: 357 YSCQKIISS-TPGVGDHHGCPYRHFSEENLRAALGRMGVGSRA-MEDVVDKVRNRHYQLA 414
+SCQKI++ PG G+ HGCPYRHF ENL A +G MGV R ++ V + + + +A
Sbjct: 393 FSCQKILTEHPPGPGEAHGCPYRHFDLENLNALMGGMGVTERGVLQGVREDKEGQRFHMA 452
Query: 415 CTLTFEAVH-------------SSSCDAGINHPNQYFSDSH 442
C FE +H +S+ I HPN+YF S+
Sbjct: 453 CNRVFEHLHKQEIKKAKDESVFTSAQLETIVHPNEYFKRSY 493
>gi|302691064|ref|XP_003035211.1| hypothetical protein SCHCODRAFT_105719 [Schizophyllum commune H4-8]
gi|300108907|gb|EFJ00309.1| hypothetical protein SCHCODRAFT_105719, partial [Schizophyllum
commune H4-8]
Length = 494
Score = 251 bits (641), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 155/462 (33%), Positives = 245/462 (53%), Gaps = 42/462 (9%)
Query: 21 LPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEEMENLVRDLWKANMRHPE 80
L Y P +V +E+FE+ A+DRLR+L I AR + EE + ++ + M
Sbjct: 30 LSFYDKPPIFDVTIEEFEICALDRLRILAEIEACAARNRSWEETKAVIDTQCRKYMELDS 89
Query: 81 ASEDVNKDI-------ISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKRALM 133
+ +++ + HFVLRL +CRTE+LRK F+ ET L+R R+ S+ +R +
Sbjct: 90 NTASIDRRDAQRRRDQLGHFVLRLAFCRTEELRKRFVKAETTLFRVRYDTDKSDERRRFL 149
Query: 134 EEFDLPCKAISRTEFENAKEKLEQVARSFDQPLPTAD------------AIFYKVPFEEV 181
D +S +E + +++L A P P +YKV + V
Sbjct: 150 NSRDFNWIEVSDSEKKQFRDEL--YASFHPPPKPNVKLSEQERKAEFEKEKYYKVRWTRV 207
Query: 182 PELVAGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTP 241
P+LV R+V++ KG AYV + S+V F S+L K L +T + + E R+ P
Sbjct: 208 PDLVERRKVFLKKGWAYVPAIEQSSIVFQAFESHLMKDLEMTAKCLPNM---NEDTRIVP 264
Query: 242 IVEALSMSYLGPDYSQTKEFGEISIKDL-----DQLARSSFPLCMRHLFDKLREDHHLKH 296
+++ LS +L S+ E + + L D++AR +P CMR++ LR+DHHLKH
Sbjct: 265 LLDKLSQGFLAGVSSEWSNQTEGTTEGLTADMIDEIARKHYPACMRNMHMNLRKDHHLKH 324
Query: 297 GGRMQLGLFLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTDYTP 356
R+ GLFLK +GL +E+A+ FW+ F ++ ++F+KEY Y+IRH+YG+EGKR +Y
Sbjct: 325 FARLTYGLFLKVLGLSLEEAIVFWRKSFD-RITDDKFNKEYRYNIRHSYGQEGKRANYPA 383
Query: 357 YSCQKIISSTPGVGDHHGCPYRHFSEENLRAALGRM----GVGSRAMEDVVDKVRNRHYQ 412
SC +I+ T + HGCPYR F+ +NL++ L M G+ S + ++++ V+ Y
Sbjct: 384 KSCSQIL--TNDLDSAHGCPYRMFAPDNLQSTLLTMYSGQGLASHHLPEIMELVKKHSYH 441
Query: 413 LACTLTFEAVHSSSCDAGI------NHPNQYFSDSHKILQPK 448
+ACT FE H GI HPNQY + S ++ + K
Sbjct: 442 VACTRVFEITHGMKKGDGIGEGESVTHPNQYAARSMELEKAK 483
>gi|403213868|emb|CCK68370.1| hypothetical protein KNAG_0A07170 [Kazachstania naganishii CBS
8797]
Length = 505
Score = 250 bits (638), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 158/456 (34%), Positives = 245/456 (53%), Gaps = 32/456 (7%)
Query: 21 LPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEEMENLVRDLWKANMRH-P 79
L Y P E+ LE FE +A+DRL+VL I ++R +EME+L++ L +
Sbjct: 47 LSFYHERPLGEITLEHFETWAIDRLKVLLEIEAFVSRNYSLKEMESLMKPLLHKLLPLGT 106
Query: 80 EASEDVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKRALMEEFDLP 139
+ D+ KD ISH++LRL +CR ++LR F+ ET L++ RF + +S + ++ L
Sbjct: 107 DNVADMRKDYISHYILRLCFCRKKELRDKFVRSETLLFKIRFGMLTSTDQVKFVQSLHLS 166
Query: 140 C-KAISRTEFENAKEKLEQVARSFDQ-PLPTADAI----------FYKVPFEEVPELVAG 187
++I+ E ++L Q Q + +D F K+PFE V EL+
Sbjct: 167 TSQSITEEEKRTLSKELYQTISPLLQFQMNISDEQQKQAYFQQERFIKLPFENVIELLGN 226
Query: 188 RRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEALS 247
R+V+I G+AY+ Q V+++ ++F L+ L+ R + R E DRL PI+ LS
Sbjct: 227 RQVFIKNGYAYLPHFQQVTMISSEFSQRLNDELM---RTFQFLPRLNEDDRLVPILNHLS 283
Query: 248 MSYLGPDYSQTKEFGEISIKDLDQLARSS---------FPLCMRHLFDKLREDHHLKHGG 298
Y DY+ +K D D++ S +PL +R+L L+++HHL++ G
Sbjct: 284 SGYTVSDYNNSKGANGYGNNDDDEINAESVWSPEISKHYPLSVRNLMQGLKQNHHLRYYG 343
Query: 299 RMQLGLFLKGVGLRMEDALAFWKAEFSQ--KVGAERFDKEYAYSIRHNYGKEGKRTDYTP 356
R QL LFLKG+GL +++L FW F Q + ++F+KEY Y+ RH+YG EG R +Y P
Sbjct: 344 RQQLTLFLKGIGLSADESLKFWTKAFVQGGHISEDKFNKEYRYNFRHSYGLEGNRINYRP 403
Query: 357 YSCQKIISST-PGVGDHHGCPYRHFSEENLRAALGRMGVGSRAMEDVVDKVRNRHYQLAC 415
+ C+ I+S PG GD+HGCP+R +S E L + L M + + + V+D Y LA
Sbjct: 404 WDCRTILSKPRPGRGDYHGCPFRDWSSERLTSELQAMNLTQQQITSVLDLSEKGDYILAN 463
Query: 416 TLTFEAVHSSSCDAG---INHPNQYFSDSHKILQPK 448
T FE H + A I+HPN YF S ++L+ K
Sbjct: 464 TKVFEFTHKGADVAEGTLIDHPNLYFERS-RMLEKK 498
>gi|363752429|ref|XP_003646431.1| hypothetical protein Ecym_4581 [Eremothecium cymbalariae
DBVPG#7215]
gi|356890066|gb|AET39614.1| hypothetical protein Ecym_4581 [Eremothecium cymbalariae
DBVPG#7215]
Length = 509
Score = 249 bits (637), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 153/460 (33%), Positives = 240/460 (52%), Gaps = 43/460 (9%)
Query: 19 STLPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEEMENLVRDLWKANMRH 78
+ L Y P E+ L+ FE +A+DRL+VL + R K +EME +++ + + +
Sbjct: 45 TKLSFYHLPPIGEITLDQFETWAIDRLKVLLELESLAQRNKNIKEMEQVIKPILASCIPL 104
Query: 79 PEASEDVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKRALMEEFDL 138
E+ E KD SHF+LRL +CR++DLR+ FL ET L++ RF + + + ++ +L
Sbjct: 105 SESLESRKKDYYSHFILRLCFCRSKDLREKFLHAETILFKLRFQMLTQADQTKFVQSLNL 164
Query: 139 P-CKAISRTE-FENAKEKLEQVARSFDQPLPTADAI----------FYKVPFEEVPELVA 186
P + IS E E A E E V+ L ++ F K+PFE V +L+
Sbjct: 165 PLLQFISDEEKQEIATELYETVSPQLQFQLNLSEEQQRRQFFNHERFIKLPFEAVIDLLG 224
Query: 187 GRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEAL 246
R+V++ +G AY+ Q ++ + ++ S LS L+ T + + E DRL PI+ L
Sbjct: 225 TRQVFLKQGWAYLPQFQQLNHIANEYASRLSDDLLKT---YQHIPKLNEDDRLLPILTHL 281
Query: 247 SMSYLGPDY-----------SQTKEFGEISIKDL-DQLARSSFPLCMRHLFDKLREDHHL 294
S Y+ ++ S I+ L + RS+FPLC ++L D L +++HL
Sbjct: 282 STGYVVTEHHYSFSDSSLHPSSETTADTITAASLHNPEVRSAFPLCAKNLMDGLSKNNHL 341
Query: 295 KHGGRMQLGLFLKGVGLRMEDALAFWKAEF--SQKVGAERFDKEYAYSIRHNYGKEGKRT 352
K GR QL FLKG+G+ +++AL FW F S + E+F+KEY Y+ RHNYG EG R
Sbjct: 342 KFNGRQQLSFFLKGLGMSVDEALKFWTDAFTRSTSMSLEKFNKEYRYNFRHNYGLEGNRI 401
Query: 353 DYTPYSCQKIISST-PGVGDHHGCPYRHFSEENLRAALGRMGVGSRAMEDVVDKVRNRHY 411
+Y P+ C+ ++S P G++HGCPYR ++ E L A L M + + ++D + +
Sbjct: 402 NYRPWDCRTVLSKPRPARGEYHGCPYRDWNPEKLSATLAAMNLTQSQVSSILDSAKRNEF 461
Query: 412 QLACTLTFE--AVHSSSCDAG-----------INHPNQYF 438
LACT +E A+ + A I HPN YF
Sbjct: 462 TLACTKAYEFSALSEAPGTANPSEPLITDQTHITHPNLYF 501
>gi|296423601|ref|XP_002841342.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295637579|emb|CAZ85533.1| unnamed protein product [Tuber melanosporum]
Length = 540
Score = 249 bits (635), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 160/495 (32%), Positives = 248/495 (50%), Gaps = 67/495 (13%)
Query: 21 LPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEEMENLV-----RDLWK-- 73
L Y P E+ L++FE +A+DRLR+L I L R E+++++ +DL
Sbjct: 33 LNFYNTPPTTEITLDEFEQWAIDRLRILGEIESCLYRNMTAAELQDVIIKKLQKDLLPLG 92
Query: 74 -----------ANMRHPEASEDVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFL 122
+ + + ++ KD SH+ LRL + R+EDLRK FL+ ET L++ R+
Sbjct: 93 ANSAAGGGSKFQDSKIAKQQDERRKDHYSHYTLRLAFARSEDLRKRFLATETILFKLRYN 152
Query: 123 LGSSEAKRALMEEFDLPCKAISRTEFENAKEKL-EQVARSFDQPLPTADAIFYKVPFEEV 181
++ ++A +E + +S E +E L ++ +A F++V +E+V
Sbjct: 153 SDDTQERQAFIESLGFDWEFLSVEEKVAMREDLLAGTGTKSNEADAVFEAGFFRVDWEKV 212
Query: 182 PELVAGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKAL--------ILTNRKWTSTI-- 231
+LV R+V + G AYV Q SLV+ +F + L KAL + ++R+ ++
Sbjct: 213 YDLVDQRKVLLRGGKAYVPESQQSSLVIAEFTARLEKALEACLLPPQVFSSRRRNRSLTI 272
Query: 232 ----------REQERDRLTPIVEALSMSYLGPDY-----SQTKEFGEISIKDLDQLARSS 276
R E DRL PI+ LS ++ P+Y + T ++ +D L +
Sbjct: 273 STQLTARALPRLDEDDRLIPILNHLSRGFIAPEYNTSMTATTLNGASLTAAVIDDLVQY- 331
Query: 277 FPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWKAEFSQKVGAERFDKE 336
FP+CMR L LR + HL H GR+Q LFLKG+GL +++AL FW+ FS ++ + F K+
Sbjct: 332 FPMCMRQLHTTLRREKHLLHNGRLQYNLFLKGIGLSVDEALIFWRKSFS-RIDDDEFQKK 390
Query: 337 YAYSIRHNYGKEGKRTDYTPYSCQKIISS-TPGVGDHHGCPYRHFSEENLRAALGRMGVG 395
Y Y++RH YG EG R +Y P SCQ+I++ P HGCPYR + +NL LG MGV
Sbjct: 391 YRYNVRHGYGLEGTRRNYKPMSCQQILTDRRPAANQVHGCPYREVAIDNLVVGLGTMGVS 450
Query: 396 SRAMEDVVDKVRN----RHYQLACTLTFEAVH-------------SSSCDAGINHPNQYF 438
R DV+ VR + Y +AC+ FE H S I HPN+YF
Sbjct: 451 DR---DVIRHVREDIEAKKYHVACSRVFEHTHAKELKREKEAGGWSGGLTENIIHPNEYF 507
Query: 439 SDSHKILQPKNNNAA 453
+ S + P + A
Sbjct: 508 TRSFGLKNPGSVEAT 522
>gi|432112844|gb|ELK35440.1| DNA primase large subunit [Myotis davidii]
Length = 689
Score = 248 bits (633), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 126/287 (43%), Positives = 174/287 (60%), Gaps = 30/287 (10%)
Query: 166 LPTADAIFYKVPFEEVPELVAGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNR 225
+P ++++ YK+PF + +L GR+VY+ G AYV +V++++ +FR+ LSKAL LT R
Sbjct: 400 VPESESV-YKIPFADALDLFRGRKVYLQDGFAYVPSKDIVAIILNEFRTKLSKALALTAR 458
Query: 226 KWTSTIREQERDRLTPIVEALSMSYLGPDYSQTKEFGEISIKDLDQLARSSFPLCMRHLF 285
+ Q +RL P++ LS SY G DYS G+IS+ +D L SFP CMR L
Sbjct: 459 SLPAV---QSDERLQPLLNHLSHSYTGQDYSTLGSAGKISLDQIDSLCTKSFPPCMRQLH 515
Query: 286 DKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWKAEFSQ---------KVGA------ 330
LR+ HHL+HGGRMQ GLFLKG+GL +E AL FWK EF + +GA
Sbjct: 516 KALRDTHHLRHGGRMQYGLFLKGIGLTLEQALQFWKQEFIRGKMDPDKIAHIGAVVNGFD 575
Query: 331 ----------ERFDKEYAYSIRHNYGKEGKRTDYTPYSCQKII-SSTPGVGDHHGCPYRH 379
+ FDK Y+Y+IRH++GKEGKRTDYTP+SC KII ++ PG GD+HGCP+RH
Sbjct: 576 LAVLEIKHNIDHFDKGYSYNIRHSFGKEGKRTDYTPFSCLKIILNNPPGQGDYHGCPFRH 635
Query: 380 FSEENLRAALGRMGVGSRAMEDVVDKVRNRHYQLACTLTFEAVHSSS 426
E L+ L + + ++D V+ HYQ+AC FE H+ S
Sbjct: 636 SDPELLKQKLQSYKISPGGISQILDLVKGTHYQVACQKYFEITHNVS 682
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 62/108 (57%), Gaps = 6/108 (5%)
Query: 20 TLPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISD-ALARGKRPEEMEN-LVRDLWKANMR 77
+L Y P + L +FE FA DR+++LK + + ++ K E +N L ++ K
Sbjct: 98 SLQFYLQPPTENISLIEFENFAFDRVKLLKAVENIGVSHVKGHESYQNKLEAEIRKLKFS 157
Query: 78 HPEASEDV----NKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRF 121
+ E ED KD ISHF+LRL YC+++DLR+WF+ E L R+RF
Sbjct: 158 YRENLEDEYDARRKDHISHFILRLAYCQSDDLRRWFIQQEMDLLRFRF 205
>gi|336265226|ref|XP_003347386.1| hypothetical protein SMAC_08356 [Sordaria macrospora k-hell]
Length = 475
Score = 247 bits (631), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 157/425 (36%), Positives = 231/425 (54%), Gaps = 33/425 (7%)
Query: 21 LPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEE----MENLVRDLWKANM 76
L Y P ++ +E FE +A+DRLR+L + R K P E M+ L+ +
Sbjct: 37 LNFYSTPPTADITIEQFEQWAIDRLRILAELEACSFRNKTPAETASHMKPLLDKYLPLDT 96
Query: 77 RHPEASE---DVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKRALM 133
+S+ KD SHF+LRL + TEDLR+ F +ET L+R R + A +
Sbjct: 97 NSSSSSQLFAQRQKDHYSHFILRLAFASTEDLRRRFTRVETMLFRMRLNTDDGRERTAFI 156
Query: 134 EEFDLPCKAISRTEFENAKEKLEQVARSFDQPLPTA-------DAIFYKVPFEEVPELVA 186
+L + +S E +L A +F++ D + KV + VPELV
Sbjct: 157 NSLNLDWETVSDDEKRELASELAATA-AFNKKGGGGGGQSYEEDQTWCKVDWTRVPELVE 215
Query: 187 GRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEAL 246
RRV++ +G+AYV + ++VV++F S L + L LT R + R E DRLTPI+ L
Sbjct: 216 QRRVFLQQGYAYVPAREQQAMVVSEFSSRLERQLELTAR---ALPRLDEDDRLTPILAHL 272
Query: 247 SMSYLGPDYS-----QTKEFGEISIKDLDQL-ARSSFPLCMRHLFDKLREDHHLKHGGRM 300
S +++ PD S +IS +++D L A FP CM HL LR D HLKH GR+
Sbjct: 273 SKNFITPDASYVGTSSAISSADISARNIDTLVANHHFPACMSHLHRTLRRDAHLKHYGRL 332
Query: 301 QLGLFLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTD-----YT 355
Q LFLKG+GL +E+ L FW+ FS K+ + F+KEY Y++RH YG G ++ Y+
Sbjct: 333 QYTLFLKGIGLNLEECLLFWRQSFS-KITDDTFNKEYRYNVRHTYGDVGGDSNRRGGGYS 391
Query: 356 PYSCQKIISS-TPGVGDHHGCPYRHFSEENLRAALGR-MGVGSRAMEDVVDKVRNRH-YQ 412
PYSCQKI++ PG G+ HGCPYRHF+ ENL+ L + MGV R + + V + + + +
Sbjct: 392 PYSCQKILTEHPPGPGEAHGCPYRHFNMENLQTLLQQGMGVTDRGVLNGVKEDKEKQKFH 451
Query: 413 LACTL 417
+AC +
Sbjct: 452 MACVI 456
>gi|336473277|gb|EGO61437.1| hypothetical protein NEUTE1DRAFT_58771 [Neurospora tetrasperma FGSC
2508]
gi|350293450|gb|EGZ74535.1| putative DNA primase large subunit [Neurospora tetrasperma FGSC
2509]
Length = 512
Score = 247 bits (630), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 166/464 (35%), Positives = 241/464 (51%), Gaps = 47/464 (10%)
Query: 21 LPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEE----MENLVRDLWKANM 76
L Y P ++ +E FE +A+DRLR+L + R K P E M+ L+ +
Sbjct: 38 LNFYSTPPTADITIEQFEQWAIDRLRILAELEACSFRNKTPAETASHMKPLLDKYLPLDT 97
Query: 77 RHPEASE---DVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKRALM 133
+S+ KD SHF+LRL + TEDLR+ F +ET L+R R + A +
Sbjct: 98 NSSSSSQLFAQRQKDHYSHFILRLAFASTEDLRRRFTRVETMLFRMRLNADDGRERAAFI 157
Query: 134 EEFDLPCKAISRTEFENAKEKLEQVARSFD--------QPLPTADAIFYKVPFEEVPELV 185
+L + +S E + SF Q + KV + VPELV
Sbjct: 158 NSLNLDWETVSDEE-KRELAAELAATASFGGFKKGQQQQQYEEDQQTWCKVSWLRVPELV 216
Query: 186 AGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEA 245
RRV++ +G+AYV + ++VV++F S L + L LT R + R E DRLTPI+
Sbjct: 217 EQRRVFLRQGYAYVPAREQQAMVVSEFSSRLERQLELTAR---ALPRLDEDDRLTPILAH 273
Query: 246 LSMSYLGPDYS-----QTKEFGEISIKDLDQLARSS-FPLCMRHLFDKLREDHHLKHGGR 299
LS +++ PD S +IS +++D L + FP CM HL LR D HLKH GR
Sbjct: 274 LSKNFITPDASYVGTSSAISSADISARNIDTLVNNHHFPACMSHLHRTLRRDAHLKHYGR 333
Query: 300 MQLGLFLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTD-----Y 354
+Q LFLKG+GL +E+ L FW+ F+ K+ + F+KEY Y++RH YG G ++ Y
Sbjct: 334 LQYTLFLKGIGLNLEECLLFWRQSFN-KITDDTFNKEYRYNVRHTYGDVGGDSNRRGGGY 392
Query: 355 TPYSCQKIISS-TPGVGDHHGCPYRHFSEENLRAALGR-MGVGSRAMEDVVDKVRNRH-Y 411
+PYSCQKI++ PG G+ HGCPYRHF+ ENL+ L + MGV R + + V + + + +
Sbjct: 393 SPYSCQKILTEHPPGPGEAHGCPYRHFNMENLQTLLQQGMGVTDRGVLNGVKEDKEKQKF 452
Query: 412 QLACTLTFEAVHSSSC----DAGIN---------HPNQYFSDSH 442
+AC FE +H D GI HPN+YF S+
Sbjct: 453 HMACNRVFEHLHKEELKKAKDEGIMTAAQLETIVHPNEYFKRSY 496
>gi|85092024|ref|XP_959189.1| hypothetical protein NCU04646 [Neurospora crassa OR74A]
gi|34395782|sp|Q8NIZ4.1|PRI2_NEUCR RecName: Full=Probable DNA primase large subunit
gi|21622313|emb|CAD37016.1| related to DNA primase large chain [Neurospora crassa]
gi|28920591|gb|EAA29953.1| hypothetical protein NCU04646 [Neurospora crassa OR74A]
Length = 513
Score = 246 bits (629), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 165/465 (35%), Positives = 240/465 (51%), Gaps = 48/465 (10%)
Query: 21 LPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEE----MENLVRDLWKANM 76
L Y P ++ +E FE +A+DRLR+L + R K P E M+ L+ +
Sbjct: 38 LNFYSTPPTADITIEQFEQWAIDRLRILAELEACSFRNKTPAETASHMKPLLDKYLPLDT 97
Query: 77 RHPEASE---DVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKRALM 133
+S+ KD SHF+LRL + TEDLR+ F +ET L+R R + A +
Sbjct: 98 NSSSSSQLFAQRQKDHYSHFILRLAFASTEDLRRRFTRVETMLFRMRLNADDGRERAAFI 157
Query: 134 EEFDLPCKAISRTEFENAKEKLEQVARSFDQPLPTADA---------IFYKVPFEEVPEL 184
+L + +S E + SF + KV + VPEL
Sbjct: 158 NSLNLDWETVSDEE-KRELAAELAATASFGGYKKGQQQQQQYEEDQQTWCKVSWLRVPEL 216
Query: 185 VAGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVE 244
V RRV++ +G+AYV + ++VV++F S L + L LT R + R E DRLTPI+
Sbjct: 217 VEQRRVFLRQGYAYVPAREQQAMVVSEFSSRLERQLELTAR---ALPRLDEDDRLTPILA 273
Query: 245 ALSMSYLGPDYS-----QTKEFGEISIKDLDQLARSS-FPLCMRHLFDKLREDHHLKHGG 298
LS +++ PD S +IS +++D L + FP CM HL LR D HLKH G
Sbjct: 274 HLSKNFITPDASYVGTSSAISSADISARNIDTLVNNHHFPACMSHLHRTLRRDAHLKHYG 333
Query: 299 RMQLGLFLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTD----- 353
R+Q LFLKG+GL +E+ L FW+ F+ K+ + F+KEY Y++RH YG G ++
Sbjct: 334 RLQYTLFLKGIGLNLEECLLFWRQSFN-KITDDTFNKEYRYNVRHTYGDVGGDSNRRGGG 392
Query: 354 YTPYSCQKIISS-TPGVGDHHGCPYRHFSEENLRAALGR-MGVGSRAMEDVVDKVRNRH- 410
Y+PYSCQKI++ PG G+ HGCPYRHF+ ENL+ L + MGV R + + V + + +
Sbjct: 393 YSPYSCQKILTEHPPGPGEAHGCPYRHFNMENLQTLLQQGMGVTDRGVLNGVKEDKEKQK 452
Query: 411 YQLACTLTFEAVHSSSC----DAGIN---------HPNQYFSDSH 442
+ +AC FE +H D GI HPN+YF S+
Sbjct: 453 FHMACNRVFEHLHKEELKKAKDEGIMTAAQLETIVHPNEYFKRSY 497
>gi|116198397|ref|XP_001225010.1| hypothetical protein CHGG_07354 [Chaetomium globosum CBS 148.51]
gi|88178633|gb|EAQ86101.1| hypothetical protein CHGG_07354 [Chaetomium globosum CBS 148.51]
Length = 464
Score = 246 bits (628), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 156/420 (37%), Positives = 228/420 (54%), Gaps = 32/420 (7%)
Query: 21 LPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEE----MENLVRDLWKANM 76
L Y P ++ LE FE +A++RLRVL + R K P E M+ L+ +
Sbjct: 32 LNFYATPPTADITLEQFEQWAINRLRVLAELEACSFRNKTPAETAVHMKPLLDKYLPLDA 91
Query: 77 RHPEASE---DVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKRALM 133
SE +D SHF+LRL + TEDLR+ F +ET L+R RF S + A +
Sbjct: 92 SSSNNSELHLQRQQDHYSHFILRLAFSSTEDLRRRFARVETMLFRLRFQTDDSRERAAFV 151
Query: 134 EEFDLPCKAISRTEFENAKEKLEQV-----ARSFDQPLPTADAIFYKVPFEEVPELVAGR 188
+ +L + +S E +L + Q L D + KV + VP+LV R
Sbjct: 152 SKLNLDWEPVSDEEKRELAPRLATTVGFGYGKRAQQVL---DEDWCKVDWTRVPDLVESR 208
Query: 189 RVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEALSM 248
+V++ G AYV + S+V+ F L +AL LT R + R E DRL PI++ LS
Sbjct: 209 KVFVKAGMAYVPGREQQSMVLNAFSKRLGQALELTAR---ALPRLDEDDRLAPILDHLSK 265
Query: 249 SYLGPDYSQTK-----EFGEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLG 303
++ PD S T E EI+ +++D L++ FP+CM HL LR D HLKH GR+Q
Sbjct: 266 NFTTPDASYTGSGAAVEGAEITARNMDNLSQH-FPMCMSHLHRSLRRDAHLKHFGRLQYT 324
Query: 304 LFLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTD-----YTPYS 358
LFLKG+GL +E+ L FW++ FS K+ + F+KEY Y++RH YG G ++ Y+PYS
Sbjct: 325 LFLKGIGLNLEECLIFWRSGFS-KITDDTFNKEYRYNVRHVYGDVGGDSNRRSGGYSPYS 383
Query: 359 CQKIIS-STPGVGDHHGCPYRHFSEENLRAALGRMGVGSRA-MEDVVDKVRNRHYQLACT 416
CQ+I++ + PG G+ HGCPYRHFS +NL L GV A ++ V + ++ + +AC
Sbjct: 384 CQRILTDNAPGPGEAHGCPYRHFSLDNLTTLLRASGVADNAVLKGVKEDKESQKFHMACN 443
>gi|380093211|emb|CCC08869.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 480
Score = 246 bits (628), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 157/425 (36%), Positives = 231/425 (54%), Gaps = 33/425 (7%)
Query: 21 LPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEE----MENLVRDLWKANM 76
L Y P ++ +E FE +A+DRLR+L + R K P E M+ L+ +
Sbjct: 37 LNFYSTPPTADITIEQFEQWAIDRLRILAELEACSFRNKTPAETASHMKPLLDKYLPLDT 96
Query: 77 RHPEASE---DVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKRALM 133
+S+ KD SHF+LRL + TEDLR+ F +ET L+R R + A +
Sbjct: 97 NSSSSSQLFAQRQKDHYSHFILRLAFASTEDLRRRFTRVETMLFRMRLNTDDGRERTAFI 156
Query: 134 EEFDLPCKAISRTEFENAKEKLEQVARSFDQPLPTA-------DAIFYKVPFEEVPELVA 186
+L + +S E +L A +F++ D + KV + VPELV
Sbjct: 157 NSLNLDWETVSDDEKRELASELAATA-AFNKKGGGGGGQSYEEDQTWCKVDWTRVPELVE 215
Query: 187 GRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEAL 246
RRV++ +G+AYV + ++VV++F S L + L LT R + R E DRLTPI+ L
Sbjct: 216 QRRVFLQQGYAYVPAREQQAMVVSEFSSRLERQLELTAR---ALPRLDEDDRLTPILAHL 272
Query: 247 SMSYLGPDYS-----QTKEFGEISIKDLDQL-ARSSFPLCMRHLFDKLREDHHLKHGGRM 300
S +++ PD S +IS +++D L A FP CM HL LR D HLKH GR+
Sbjct: 273 SKNFITPDASYVGTSSAISSADISARNIDTLVANHHFPACMSHLHRTLRRDAHLKHYGRL 332
Query: 301 QLGLFLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTD-----YT 355
Q LFLKG+GL +E+ L FW+ FS K+ + F+KEY Y++RH YG G ++ Y+
Sbjct: 333 QYTLFLKGIGLNLEECLLFWRQSFS-KITDDTFNKEYRYNVRHTYGDVGGDSNRRGGGYS 391
Query: 356 PYSCQKIISS-TPGVGDHHGCPYRHFSEENLRAALGR-MGVGSRAMEDVVDKVRNRH-YQ 412
PYSCQKI++ PG G+ HGCPYRHF+ ENL+ L + MGV R + + V + + + +
Sbjct: 392 PYSCQKILTEHPPGPGEAHGCPYRHFNMENLQTLLQQGMGVTDRGVLNGVKEDKEKQKFH 451
Query: 413 LACTL 417
+AC +
Sbjct: 452 MACVI 456
>gi|50555177|ref|XP_504997.1| YALI0F04576p [Yarrowia lipolytica]
gi|49650867|emb|CAG77804.1| YALI0F04576p [Yarrowia lipolytica CLIB122]
Length = 469
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 152/436 (34%), Positives = 223/436 (51%), Gaps = 27/436 (6%)
Query: 19 STLPLYRYAPQLEVRLEDFEVFAMDRLRVLK-----------GISDALARGKRPEEMENL 67
S + Y P L + LE FE +A+DRLRVL G+ D L G +P +E
Sbjct: 29 SRMSFYNTPPNLGISLEAFEEWAIDRLRVLTKLQQLQLSGKTGLKD-LDSGLKPT-LEKY 86
Query: 68 VRDLWKANMRHPEASEDVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSE 127
+ N+ + KD SHF+LRLVYCRT +LRK F+ E L+RYR L
Sbjct: 87 LPLGSSRNVSDEVTQKQRQKDHYSHFILRLVYCRTPELRKEFVEREKLLFRYRLSLEEGG 146
Query: 128 AKRALMEEFDLPCKAISRTEFENAKEKLEQVARSFDQPLPTADAIFYKVPFEEVPELVAG 187
+ + + D + + EFE+ + LE V+R A + KV +++V +LV
Sbjct: 147 ERDSFVNSLDFEWEKVDVDEFEDLRPYLETVSRD---KADIASRDYVKVDWQKVADLVDS 203
Query: 188 RRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEALS 247
RRV++ G YV +LVV +F S L+ A+ + R E RL PI++ L+
Sbjct: 204 RRVFLRAGKVYVPASLQQNLVVNEFESRLAVAMETAAMLLS---RLDESTRLMPILDHLA 260
Query: 248 MSYLGPDYSQTKEF-GEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFL 306
+ + + + G+I ++D + + PLCM L LR+ +HLKH GR Q GLF+
Sbjct: 261 QFGVTETFQKNEALDGKIGPSNIDSVVK-HMPLCMSQLHTTLRQKNHLKHDGRFQYGLFI 319
Query: 307 KGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQKIISST 366
KG+G +++AL FW+ F KV ++F+KEY Y+I HNYG +G +Y P C+ II++
Sbjct: 320 KGLGFSVDEALQFWREAF--KVTDDKFNKEYQYNILHNYGLKGSGKNYAPKDCKSIIANN 377
Query: 367 PGVGDH--HGCPYRHFSEENLRAALGRMGVGSRA-MEDVVDKVRNRHYQLACTLTFEAVH 423
P HGCPYR E L L MG+ R + + D+V+N +Y ACT E H
Sbjct: 378 PPANSELVHGCPYRSLRPEELVGRLKNMGIEDRMELNKITDQVKNTNYHGACTRVLELTH 437
Query: 424 SS-SCDAGINHPNQYF 438
+ + HPN YF
Sbjct: 438 PGLKVEEVVQHPNDYF 453
>gi|346467769|gb|AEO33729.1| hypothetical protein [Amblyomma maculatum]
Length = 396
Score = 242 bits (617), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 137/353 (38%), Positives = 209/353 (59%), Gaps = 16/353 (4%)
Query: 19 STLPLYRYAPQLEVRLEDFEVFAMDRLRVLKG--ISDALARGKR-PEEMENLVRDLWKAN 75
+ L Y P + L +FE A++RL+VLK ++DA KR P+ ++ DL K
Sbjct: 49 TLLNFYNTPPTDYIPLSEFEEIAIERLKVLKAFEVADAKFNNKRSPDYASAVMDDLRKQK 108
Query: 76 MRH--PEASED-----VNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEA 128
++ ++D + KD +S F+L +C T R+WF+S E L+R+RF S+
Sbjct: 109 LKAYVSRVTDDNSVAIIRKDNLSFFILLFAFCETPAQRRWFMSQEMDLFRFRFQNESAAG 168
Query: 129 KRALMEEFDLPCKAISRTEFENAKEKLEQVARSFDQPLPTADAI-FYKVPFEEVPELVAG 187
+A +++ ++ IS E AK + VA S D D + YKV F +V LV+
Sbjct: 169 IQAFLKDANMGFTPISAAE--KAKYFEQIVASSPDLTAVKLDTMDVYKVSFLDVLPLVSD 226
Query: 188 RRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEALS 247
R VY+ +G AYV +++LV +Q+R++LS L T R + R +E DR+ PI+ A++
Sbjct: 227 RSVYLRRGEAYVPSEFLITLVESQYRAHLSHLLAQTTRIFQ---RLEEDDRIVPILRAVA 283
Query: 248 MSYLGPDYSQTKEFGEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLK 307
G + ++ ++ + +D+L + SFP+CM+ + LR +HHL+HG RMQ GLFLK
Sbjct: 284 SFDAGSGFDASRPSDSVTPEMIDELCKESFPMCMKTMHAALRANHHLRHGARMQYGLFLK 343
Query: 308 GVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQ 360
G+GL ++DAL FW+ EFS+ VG E FDK+Y+Y+IRHNYG EGKR +YTPYSC
Sbjct: 344 GIGLGLQDALRFWREEFSKHVGVENFDKKYSYNIRHNYGTEGKRANYTPYSCN 396
>gi|452989323|gb|EME89078.1| hypothetical protein MYCFIDRAFT_27412 [Pseudocercospora fijiensis
CIRAD86]
Length = 506
Score = 240 bits (613), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 157/461 (34%), Positives = 237/461 (51%), Gaps = 47/461 (10%)
Query: 16 DSVSTLPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEEMENLVRDLWKAN 75
D L Y P +V LE FE +A+ RL+VL + R + P E E +R + +
Sbjct: 33 DYAHRLNFYIVPPTGDVTLEQFEEWAIARLKVLAELESCQFRNRTPAETEEHMRPILAKH 92
Query: 76 M-------RHPEASEDVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEA 128
+ R E S + +D SH+ LRL + T+DLR+ F +E+ L+R R
Sbjct: 93 LPLQSNSSRSSELSLERKRDHYSHWTLRLAFASTQDLRQRFARLESQLFRLRIQQDDQRE 152
Query: 129 KRALMEEFDLPCKAISRTEFENAKEKLEQVARSFDQPLPTADAIFYKVPFEEVPELVAGR 188
KRA +E + + + E + L+ Q + ++ V +E VPELV R
Sbjct: 153 KRAFIESLPMTWQTVGNEEKSQLLDDLKAATNCTKQD----EESWFMVDWENVPELVERR 208
Query: 189 RVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEALSM 248
+V + +G AYV + + S+VV++F +L L L R R E +RL PI+ LS
Sbjct: 209 QVLLKRGKAYVHVREQTSMVVSEFSRHLESGLELAARFLP---RMDEDNRLAPILHHLSQ 265
Query: 249 SYLGPDYSQTKEFGEISIKDLDQLARSS-------FPLCMRHLFDKLREDHHLKHGGRMQ 301
S++ PD +E S+ D+ + +S FPLCM++L +LR+++HLKH GR+Q
Sbjct: 266 SFVAPDAGYAEE---SSLSDMTNVTAASIDSYSQYFPLCMQNLHRELRKNNHLKHFGRLQ 322
Query: 302 LGLFLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTD-----YTP 356
LFLKG+GL +++ +AFW+ F + + ++F EY Y+IRH YG G ++ YTP
Sbjct: 323 YTLFLKGIGLNLQECIAFWRRSF-KLITDDKFKSEYLYNIRHAYGDVGGDSNRRGRGYTP 381
Query: 357 YSCQKIIS-STPGVGDHHGCPYRHFSEENLRAALGRMGVGSRA-MEDVVDKVRNRHYQLA 414
YSCQK+++ + P G HGCPYR +S +NL L +GV R ++ V + V + Y +A
Sbjct: 382 YSCQKLLTEALPSAGQQHGCPYRTYSPDNLITLLQNVGVSDRELLKGVREDVGKQRYHIA 441
Query: 415 CTLTFEAVH--------------SSSCDAGINHPNQYFSDS 441
C FEA H +S D I HPN YF S
Sbjct: 442 CNRVFEAAHKNELKKVKDESLMPASELDT-ILHPNTYFKRS 481
>gi|238881243|gb|EEQ44881.1| hypothetical protein CAWG_03178 [Candida albicans WO-1]
Length = 539
Score = 239 bits (610), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 154/471 (32%), Positives = 249/471 (52%), Gaps = 48/471 (10%)
Query: 19 STLPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEEMENLVRDLWKANMRH 78
S L Y P E+ LE+FE +A+DRL++L I LAR K +E+E ++ L +
Sbjct: 47 SRLSFYDLPPTQEITLEEFETWAIDRLKILIEIESCLARSKTLKEIETSIKPLLLKYLPL 106
Query: 79 PEASE--DVN------KDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKR 130
S VN KD SHF+LRLV+CR+E+LRK F+ E+ L++ R+ L + ++
Sbjct: 107 NPTSGGGTVNYEKERMKDHYSHFILRLVFCRSEELRKNFIKNESTLFKVRYNLLQPKEQQ 166
Query: 131 ALME--EFDLPCKAISRTEFENAKEKLEQVARSF--DQPLPTADAI-------------- 172
+E L + I+ E N ++L + + +Q + + +
Sbjct: 167 EFIELNHHRLIWEYITPEERTNLHQQLFNSSGNLIKNQFMLQGENLTNDQLKQFIMYKEN 226
Query: 173 FYKVPFEEVP-ELVAGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTI 231
F K+PFE++ L++ R +++ KG+ Y+ ++L+ +F + L+ LI T + +
Sbjct: 227 FIKLPFEKITGNLISNRSIFLFKGYGYLPASLQLNLLSIEFINILNDNLIKT---FQTIP 283
Query: 232 REQERDRLTPIVEALSMSYLGPDY-SQTKEFGEISIKDLDQLA------RSSFPLCMRHL 284
R +E DRL P++ LS ++ Y S+ + E I D++ + +PLC +HL
Sbjct: 284 RLEEDDRLLPLLNNLSKNFSNFQYESEINKLDEEFISDINSKSIITPKITKHYPLCAQHL 343
Query: 285 FDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWKAEF--SQKVGAERFDKEYAYSIR 342
L + HLK+ GR QLG+FLKG+GL +++AL FW ++F + + E F+K+Y Y+IR
Sbjct: 344 QRNLIANSHLKYNGRQQLGIFLKGIGLNVDEALKFWSSQFIKNNSMSLETFNKDYKYNIR 403
Query: 343 HNYGKEGKRTDYTPYSCQKIISST-PGV-GDHHGCPYRHFSEENLRAALGRMGVGSRA-M 399
H YG EG R +Y P+ C I+S P + ++HGCPYR F+ + L L MG+ + +
Sbjct: 404 HQYGLEGARINYKPWDCSTILSKPRPNIKSEYHGCPYRDFNLDVLINNLNNMGITDQQDL 463
Query: 400 EDVVDKVRNRHYQLACTLTFEAVHSS------SCDAGINHPNQYFSDSHKI 444
+VD V Y +ACT FE H + + INHPN YF S ++
Sbjct: 464 NSIVDDVNKHDYTIACTRVFELTHQKQLMGKENMNMHINHPNLYFDRSRQL 514
>gi|68480888|ref|XP_715597.1| hypothetical protein CaO19.10403 [Candida albicans SC5314]
gi|68480999|ref|XP_715541.1| hypothetical protein CaO19.2885 [Candida albicans SC5314]
gi|46437167|gb|EAK96518.1| hypothetical protein CaO19.2885 [Candida albicans SC5314]
gi|46437227|gb|EAK96577.1| hypothetical protein CaO19.10403 [Candida albicans SC5314]
Length = 543
Score = 239 bits (609), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 154/471 (32%), Positives = 249/471 (52%), Gaps = 48/471 (10%)
Query: 19 STLPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEEMENLVRDLWKANMRH 78
S L Y P E+ LE+FE +A+DRL++L I LAR K +E+E ++ L +
Sbjct: 50 SRLSFYDLPPTQEITLEEFETWAIDRLKILIEIESCLARSKTLKEIETSIKPLLLKYLPL 109
Query: 79 PEASE--DVN------KDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKR 130
S VN KD SHF+LRLV+CR+E+LRK F+ E+ L++ R+ L + ++
Sbjct: 110 NPTSGGGTVNYEKERMKDHYSHFILRLVFCRSEELRKNFIKNESTLFKVRYNLLQPKEQQ 169
Query: 131 ALME--EFDLPCKAISRTEFENAKEKLEQVARSF--DQPLPTADAI-------------- 172
+E L + I+ E N ++L + + +Q + + +
Sbjct: 170 EFIELNHHRLIWEYITPEEKTNLHQQLFNSSGNLIKNQFMLQGENLTNDQLKQFIMYKEN 229
Query: 173 FYKVPFEEVP-ELVAGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTI 231
F K+PFE++ L++ R +++ KG+ Y+ ++L+ +F + L+ LI T + +
Sbjct: 230 FIKLPFEKITGNLISNRSIFLFKGYGYLPASLQLNLLSIEFINILNDNLIKT---FQTIP 286
Query: 232 REQERDRLTPIVEALSMSYLGPDY-SQTKEFGEISIKDLDQLA------RSSFPLCMRHL 284
R +E DRL P++ LS ++ Y S+ + E I D++ + +PLC +HL
Sbjct: 287 RLEEDDRLLPLLNNLSKNFSNFQYESEINKLDEEFISDINSKSIITPKITKHYPLCAQHL 346
Query: 285 FDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWKAEF--SQKVGAERFDKEYAYSIR 342
L + HLK+ GR QLG+FLKG+GL +++AL FW ++F + + E F+K+Y Y+IR
Sbjct: 347 QRNLIANSHLKYNGRQQLGIFLKGIGLNVDEALKFWSSQFIKNNSMSLETFNKDYKYNIR 406
Query: 343 HNYGKEGKRTDYTPYSCQKIISST-PGV-GDHHGCPYRHFSEENLRAALGRMGVGSRA-M 399
H YG EG R +Y P+ C I+S P + ++HGCPYR F+ + L L MG+ + +
Sbjct: 407 HQYGLEGARINYKPWDCSTILSEPRPNIKSEYHGCPYRDFNLDVLINNLNNMGITDQQDL 466
Query: 400 EDVVDKVRNRHYQLACTLTFEAVHSS------SCDAGINHPNQYFSDSHKI 444
+VD V Y +ACT FE H + + INHPN YF S ++
Sbjct: 467 NSIVDDVNKHDYTIACTRVFELTHQKQLMGKENMNMHINHPNLYFDRSRQL 517
>gi|315044215|ref|XP_003171483.1| DNA primase large subunit [Arthroderma gypseum CBS 118893]
gi|311343826|gb|EFR03029.1| DNA primase large subunit [Arthroderma gypseum CBS 118893]
Length = 478
Score = 238 bits (607), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 163/466 (34%), Positives = 243/466 (52%), Gaps = 71/466 (15%)
Query: 21 LPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEEMENLVRDLWK------A 74
L Y P E+ LE FE +A+DRLRVL + R K P E + L K +
Sbjct: 38 LNFYVVPPTAEITLEQFEQWAIDRLRVLSELEACSYRNKTPTETAAHIAPLLKKFLPLNS 97
Query: 75 NMRHPEASEDV-----NKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAK 129
N +S+D+ KD SHF+LRL + T+DLR+ F+ +E+ L+++RF + +
Sbjct: 98 NTSLGSSSDDILQAERQKDHYSHFILRLAFASTDDLRRRFVRLESMLFKFRFQQDDARER 157
Query: 130 RALMEEFDLPCKAISRTEFENAKEKLEQVARSFDQPLPTADAIFYKVPFEEVPELVAGRR 189
R ++ L + ++ +EK E A+A+ P G R
Sbjct: 158 REFVDSLHLDWETVT------DEEKAE-----------LAEALLASTP---------GLR 191
Query: 190 VYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEALSMS 249
KG AYV + + +S+++ +F + L KA+ LT+R + R E DRL+PI++ LS +
Sbjct: 192 W---KGKAYVPLREQLSMILAEFTARLEKAMELTSR---ALPRLDEDDRLSPILQHLSKN 245
Query: 250 YLGPDYSQTKEFGE-----ISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGL 304
+ D S ++ G I+ +D LA+ FPLCMR+L +LR++ HLKH GR+Q L
Sbjct: 246 FGTADSSYSEGEGAVPGAPINAASVDVLAQH-FPLCMRNLHMQLRKNAHLKHFGRLQYTL 304
Query: 305 FLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTD-----YTPYSC 359
FLKG+GL ++D LAFW+ F + + + F+ Y Y++RH YG G + Y PYSC
Sbjct: 305 FLKGIGLSLDDCLAFWRRSF-RNITDDEFNSRYKYNVRHAYGDVGGDINRRGRGYPPYSC 363
Query: 360 QKIIS-STPGVGDHHGCPYRHFSEENLRAALGRMGVGSR-AMEDVVDKVRNRHYQLACTL 417
QKI++ + PG G HGCPYRHFS +NL + L +G+ R + V + V Y +AC
Sbjct: 364 QKILTDNAPGAGQTHGCPYRHFSPDNLISLLETVGITDRETLRGVREDVGRTRYHIACNR 423
Query: 418 TFEAVHSSSC----DAG---------INHPNQYFSDSHKILQPKNN 450
FE VH + D G I HPN YF S+ +L+ NN
Sbjct: 424 VFEHVHKNELKKVRDEGIWSQTELDTIVHPNVYFKRSY-LLKNLNN 468
>gi|453089232|gb|EMF17272.1| DNA primase large subunit [Mycosphaerella populorum SO2202]
Length = 507
Score = 238 bits (606), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 154/470 (32%), Positives = 241/470 (51%), Gaps = 42/470 (8%)
Query: 8 RSRTNTPNDSVSTLPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEEMENL 67
++ T D + Y P +V LE FE +A+ RL+VL + R + P E E
Sbjct: 25 QTATFAEQDYAHRMNFYIIPPTGDVTLEQFEEWAIARLKVLAELESCHFRNRSPAETEEY 84
Query: 68 VRDLWKANM-------RHPEASEDVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYR 120
+R + +M RH + +D SH+ LRL + T+DLR+ F +E+ L++ R
Sbjct: 85 MRPILDKHMPLSSNSARHNDIPMQRKRDHYSHWTLRLAFSSTQDLRQRFARLESQLFKLR 144
Query: 121 FLLGSSEAKRALMEEFDLPCKAISRTEFENAKEKLEQVARSFDQPLPTADAIFYKVPFEE 180
+RA +E + + + E E+L+ F + T + ++K +E
Sbjct: 145 IQQDDLRERRAFIEALPMSWETVGEDEKAQLLEELKAATGFFAK---TDEENWFKCEWEN 201
Query: 181 VPELVAGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLT 240
VPELV R+V + KG AYV + + +S+VV +F L L + R R E +RL
Sbjct: 202 VPELVERRQVLLKKGKAYVHVREQMSMVVNEFSRQLESGLEVAAR---FLPRMDEDNRLA 258
Query: 241 PIVEALSMSYLGPD--YSQTKEFGE---ISIKDLDQLARSSFPLCMRHLFDKLREDHHLK 295
PI+ LS S++ PD YS+ G+ ++ +D ++ FPLCM++L +L+++ HLK
Sbjct: 259 PILHHLSQSFVAPDAGYSEESSLGDMTNVTAASIDSYSQH-FPLCMQNLHRELKKNSHLK 317
Query: 296 HGGRMQLGLFLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTD-- 353
H R+Q LFLKG+GL +++ + FW+ F + V ++F EY Y+IRH YG G ++
Sbjct: 318 HYSRLQYTLFLKGLGLNLQECILFWRRSF-KLVTDDKFKSEYLYNIRHAYGDVGGDSNRR 376
Query: 354 ---YTPYSCQKIISST-PGVGDHHGCPYRHFSEENLRAALGRMGVGSRA-MEDVVDKVRN 408
YTPYSC K+++ P G +HGCPYR +S +NL L +GV R ++ V + V
Sbjct: 377 GRGYTPYSCNKLLTEPLPASGQNHGCPYRTYSPDNLITLLQNVGVNDRELLKGVREDVGR 436
Query: 409 RHYQLACTLTFEAVH--------------SSSCDAGINHPNQYFSDSHKI 444
+ Y +AC FEA H +S D I HPN YF S ++
Sbjct: 437 QRYHIACNRVFEAAHKNEIKKVKDESLWPASELDT-ILHPNTYFKRSFQL 485
>gi|312095365|ref|XP_003148331.1| hypothetical protein LOAG_12771 [Loa loa]
Length = 319
Score = 237 bits (605), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 124/283 (43%), Positives = 176/283 (62%), Gaps = 9/283 (3%)
Query: 173 FYKVPFEEVPELVAGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIR 232
F+KVPFE+ +LV RRV + GHA+V+ + ++ T+ R N++ A+ R + +
Sbjct: 6 FWKVPFEDALDLVRKRRVLLVFGHAFVSEDDLQVILCTRLRLNIAAAMAHACR---NIVF 62
Query: 233 EQERDRLTPIVEALSM-SYLGPDYSQTKEFGEISIKDLDQLARSSFPLCMRHLFDKLRED 291
+E DRL P + +LS SY+G +Y + ++ +D LA +SFPLCMR++ ++LR D
Sbjct: 63 IEENDRLMPFLRSLSSRSYVGKNYIGM-DGSHVTPDMVDSLAATSFPLCMRNIHNRLRAD 121
Query: 292 HHLKHGGRMQLGLFLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKR 351
HHL+HG RMQ GLFLK +G+ +EDAL FW+AEF++K+ ++FDK+YAY+IRHNYGKEGK
Sbjct: 122 HHLRHGARMQYGLFLKAIGMTLEDALLFWRAEFTKKMDPDKFDKQYAYNIRHNYGKEGKH 181
Query: 352 TDYTPYSCQKII-SSTPGVGDHHGCPYRHFSEENLRAALGRMGVGSRAMEDVVDKVRNRH 410
DY+ Y C KII S+P D HGCPYRH + L L G+ +E + +N
Sbjct: 182 ADYSAYPCTKIILDSSPSSADCHGCPYRHSDLQPLVQNLRSSGLSKSQIEHITLLSKNTQ 241
Query: 411 YQLACTLTFEAVHS---SSCDAGINHPNQYFSDSHKILQPKNN 450
Y ACT FE H +S I HPNQYF S ++ + K N
Sbjct: 242 YDKACTRYFEFSHKMVENSLGTVITHPNQYFELSRQVHEGKRN 284
>gi|398399158|ref|XP_003853036.1| DNA primase [Zymoseptoria tritici IPO323]
gi|339472918|gb|EGP88012.1| DNA primase [Zymoseptoria tritici IPO323]
Length = 510
Score = 237 bits (605), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 148/458 (32%), Positives = 236/458 (51%), Gaps = 41/458 (8%)
Query: 16 DSVSTLPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEEMENLVRDLWKAN 75
D + Y P ++ LE+FE + + RL+VL + R K P E E +R + +
Sbjct: 34 DYAHRMNFYIIPPTGDITLEEFEEWGIARLKVLAELEACQFRNKTPTETEEYMRPILAKH 93
Query: 76 M-------RHPEASEDVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEA 128
+ R E + + +D SH+ LRL + T+DLR+ F +E L++ R
Sbjct: 94 LPLASNSSRSSEVNLERKRDHYSHWTLRLAFSSTQDLRQRFSRLEAQLFKLRIQQDDLRE 153
Query: 129 KRALMEEFDLPCKAISRTEFENAKEKLEQVARSFDQPLPTADAIFYKVPFEEVPELVAGR 188
+++ +E + + +S E + L+ R + + + ++KV +E VPELV R
Sbjct: 154 RKSFIESLPMSWETVSNEEKAILGDDLKAATRWYKED----EESWFKVEWENVPELVEKR 209
Query: 189 RVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEALSM 248
+V + KG AYV + + +++VV +F L L L R R E +RL PI+ LS
Sbjct: 210 QVLLKKGKAYVHVREQMNMVVNEFSRQLESGLELAAR---FLPRMDEDNRLAPILHHLSQ 266
Query: 249 SYLGPD--YSQTKEFGEISIKDLDQLARSS--FPLCMRHLFDKLREDHHLKHGGRMQLGL 304
S++ PD Y+++ +I+ + S FPLCM++L +LR++ HLKH GR+Q L
Sbjct: 267 SFVAPDASYAESSSLNDITSITAGSIDGHSKHFPLCMQNLHRELRKNSHLKHYGRLQYTL 326
Query: 305 FLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTD-----YTPYSC 359
FLKG+GL M + + FW+ F + + ++F EY Y++RH YG G ++ YTPYSC
Sbjct: 327 FLKGIGLSMNECIVFWRKSF-KLITDDKFKSEYLYNVRHAYGDVGGDSNRRGRGYTPYSC 385
Query: 360 QKIIS-STPGVGDHHGCPYRHFSEENLRAALGRMGVGSRA-MEDVVDKVRNRHYQLACTL 417
QK+++ + P G HGCPYR +S +NL L +GV + ++ V + V + Y +AC
Sbjct: 386 QKLLTEAPPSSGQTHGCPYRTYSSDNLIGLLQNVGVSDKELLKGVREDVAKQRYHIACNR 445
Query: 418 TFEAVH--------------SSSCDAGINHPNQYFSDS 441
FE+ H +S D I HPN YF S
Sbjct: 446 VFESTHKNEIKKVKDESLWPASELDT-ILHPNTYFKRS 482
>gi|351713909|gb|EHB16828.1| DNA primase large subunit [Heterocephalus glaber]
Length = 330
Score = 237 bits (604), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 111/215 (51%), Positives = 150/215 (69%), Gaps = 3/215 (1%)
Query: 234 QERDRLTPIVEALSMSYLGPDYSQTKEFGEISIKDLDQLARSSFPLCMRHLFDKLREDHH 293
Q +RL P++ LS SY G DYS G+IS+ +D L+ +SFP CMR L LRE+HH
Sbjct: 64 QSDERLQPLLNHLSHSYTGQDYSTQGNTGKISLDQIDLLSTTSFPPCMRQLHKALRENHH 123
Query: 294 LKHGGRMQLGLFLKGVGLRMEDALAFWKAEFSQ-KVGAERFDKEYAYSIRHNYGKEGKRT 352
L+HGGRMQ GLFLKG+GL +E AL FWK EF + K+ ++FD+ Y+Y+IRH++GKEGKRT
Sbjct: 124 LRHGGRMQYGLFLKGIGLTLEQALEFWKREFVRGKMDPDKFDRGYSYNIRHSFGKEGKRT 183
Query: 353 DYTPYSCQKII-SSTPGVGDHHGCPYRHFSEENLRAALGRMGVGSRAMEDVVDKVRNRHY 411
DYTPYSC KII ++ PG GD+HGCP+RH E L+ L + S+ + ++D V+ HY
Sbjct: 184 DYTPYSCMKIILTNPPGQGDYHGCPFRHSDPELLKQKLQSYKISSQRISQILDLVKGTHY 243
Query: 412 QLACTLTFEAVHS-SSCDAGINHPNQYFSDSHKIL 445
Q+AC FE +H+ C +NHPNQ+F +S +IL
Sbjct: 244 QVACQKYFEMIHNVDDCGFSLNHPNQFFDESQRIL 278
>gi|308470900|ref|XP_003097682.1| CRE-PRI-2 protein [Caenorhabditis remanei]
gi|308239800|gb|EFO83752.1| CRE-PRI-2 protein [Caenorhabditis remanei]
Length = 504
Score = 235 bits (599), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 157/468 (33%), Positives = 246/468 (52%), Gaps = 31/468 (6%)
Query: 2 EIVRSQRSRTNTPNDSVST---LPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARG 58
++ +Q+S N P+++ L LY+ P + L +F+ AM+RL++LK + +
Sbjct: 16 QMFNNQQSIKNVPSNTQEIPGYLQLYQTPPGENISLTEFDEIAMERLKLLKNFENC--KD 73
Query: 59 KRP---EEMENLVR---DLWKANM---RHPEASEDV----NKDIISHFVLRLVYCRTEDL 105
P EE +N R D K + P +SED+ +D I HF+LRL +CRT +
Sbjct: 74 SHPMHTEEFKNKFRKTCDKIKLIVFPDLKPTSSEDIAELWRRDNIGHFILRLAFCRTPEN 133
Query: 106 RKWFLSMETALYRYRFLLGSSEAKRALMEEFDLPCKAISRTEFENAKEKLEQVARSFDQP 165
+KW +E L R+R + + + P +S E + +E LE +
Sbjct: 134 QKWLTQIEGDLLRFRLRQEREVVVDSSLSAVNFPIHKLSSEEKKEMEEDLEHACQVLS-- 191
Query: 166 LPTADAIFYKVPFEEVPELVAGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNR 225
+ + FYKV F + EL+ V++ KG AY +V+++V++ ++ A+ R
Sbjct: 192 IDMKNKAFYKVDFIDAIELIRRGSVHLKKGFAYFPFEDLVTILVSKMKNTTMAAMA---R 248
Query: 226 KWTSTIREQERDRLTPIVEALSM-SYLGPDYSQTKEFGEISIKD--LDQLARSSFPLCMR 282
+ +E RL P + LS +Y G DY+ + G I I +D+LA SF CM+
Sbjct: 249 AFKHLAILEEEGRLLPRLARLSNNAYSGKDYNGEQADGSIIITRHMIDKLAVRSFAPCMK 308
Query: 283 HLFDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIR 342
+ LR +HHLK+G R Q GLFLKG+GL +E+A+A + EF++K+ +++FDKEY+Y+IR
Sbjct: 309 QMHKNLRLNHHLKYGARRQYGLFLKGIGLSLEEAIAMMRDEFTKKIPSDKFDKEYSYNIR 368
Query: 343 HNYGKEGKRTDYTPYSCQKII-SSTPGVGDHHGCPYRHFSEENLRAAL-GRMGVGSRAME 400
+ YGKEG+R T SC II ++ P D HGCP+RH ++ L+ L G + +E
Sbjct: 369 YMYGKEGRRVPQTAMSCATIILNNPPSATDCHGCPFRHSEKQVLKQKLSGESILKKGQVE 428
Query: 401 DVVDKVRNRHYQLACTLTFEAVH---SSSCDAGINHPNQYFSDSHKIL 445
+VD + Y ACT FE H I HPNQY+ +S KI+
Sbjct: 429 LIVDLAESNQYDKACTRYFEFTHHLEEGGLGQRITHPNQYYEESQKII 476
>gi|339258366|ref|XP_003369369.1| DNA primase large subunit [Trichinella spiralis]
gi|316966408|gb|EFV50996.1| DNA primase large subunit [Trichinella spiralis]
Length = 523
Score = 235 bits (599), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 135/384 (35%), Positives = 209/384 (54%), Gaps = 26/384 (6%)
Query: 87 KDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKRALMEEFDLPCKAISRT 146
+D SHF+L + + T R+WFL E L+ +R L + + R + + ++ ++IS
Sbjct: 119 EDAQSHFLLLIAFAETFQNRQWFLQQEVDLFHFRILCERNASIRDFLSQNNITYESISED 178
Query: 147 EFENAKEKLEQVARSFDQPL--------PTADAI----------FYKVPFEEVPELVAGR 188
E E+ ++L S P +AI FYKVPF+E L+ R
Sbjct: 179 EKEHQWKQLFDGCHSAKVKYFKKMKKLPPEEEAIEQKRFVMQWEFYKVPFKETIALLRER 238
Query: 189 RVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEAL-- 246
RV + A V ++ +V +FRS S+ L + ++ + L + +A
Sbjct: 239 RVLVKSRMALVPHCDFLNTIVNRFRSVQSRKLSIIAKRCHLLYADSRLADLRVLGDARCP 298
Query: 247 SMSYLGPDYSQTKEFGEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFL 306
+ Y+ S++ + +L+ +SFPLCMR L+D+L+ HHL+HGGRMQLGLFL
Sbjct: 299 TQEYVSSADSRSVTMEMVEPVSSSKLSVTSFPLCMRRLYDELKSAHHLRHGGRMQLGLFL 358
Query: 307 KGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQKII-SS 365
K +GL + ++L FW+ F K+ AE+F ++YAYSIRHNYG+EGKR DY YSC KII ++
Sbjct: 359 KKIGLSLNESLKFWEYHFRPKMDAEKFQRQYAYSIRHNYGEEGKRADYAAYSCLKIIMNN 418
Query: 366 TPGVGDHHG--CPYRHFSEENLRAALGRMGVGSRAMEDVVDKVRNRHYQLACTLTFEAVH 423
PG+GD HG CP++H E+L+ L G+ ++++V+ N HY AC++ F+ +H
Sbjct: 419 PPGIGDFHGSRCPFKHCDAEHLQQLLKNCGIHKDDIKNIVNYASNNHYNKACSIFFDCMH 478
Query: 424 S---SSCDAGINHPNQYFSDSHKI 444
I HPNQYF +S K+
Sbjct: 479 KLPEGGLGEFITHPNQYFDESRKL 502
>gi|268569768|ref|XP_002640609.1| C. briggsae CBR-PRI-2 protein [Caenorhabditis briggsae]
Length = 497
Score = 232 bits (592), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 149/466 (31%), Positives = 241/466 (51%), Gaps = 27/466 (5%)
Query: 2 EIVRSQRSRTNTPNDSVST---LPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDAL--- 55
+I +++S N P+ + L LY+ P ++ L +F+ AM+RL++LK +
Sbjct: 14 KIASNRQSIKNGPSSDIEIPGYLQLYQAPPGDDISLTEFDEIAMERLKLLKTFENCKDNH 73
Query: 56 --------ARGKRPEEMENLVRDLWKANMRHPEASEDVNKDIISHFVLRLVYCRTEDLRK 107
A+ K+ E L+ + EA E +D I HF+LRL +CRT + +K
Sbjct: 74 SIHSEEFKAKLKKACESIKLIVFPEQKPFNTEEADELWRRDNIGHFILRLAFCRTPENQK 133
Query: 108 WFLSMETALYRYRFLLGSSEAKRALMEEFDLPCKAISRTEFENAKEKLEQVARSFDQPLP 167
WF +E L+R+R A + + ++ ++ E + LE + + +P
Sbjct: 134 WFTQIEGELFRFRMRQEREVVVDASLSKVNIDIHRLTDEEKKPMAVDLENACQVYSLDMP 193
Query: 168 TADAIFYKVPFEEVPELVAGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKW 227
+FY+V F + ELV V++ KG AY +V+++V++ ++ + A+ R +
Sbjct: 194 KK--VFYRVDFLDAIELVRRGSVHLKKGFAYFPFDDLVTILVSKMKNTMMAAMA---RAF 248
Query: 228 TSTIREQERDRLTPIVEALSM-SYLGPDYSQTKEFGEISIKD--LDQLARSSFPLCMRHL 284
+E RL P + LS +Y G DYS + G I I +D+L SF CM+ +
Sbjct: 249 KHLALLEEEGRLLPRLARLSNNAYSGKDYSGEQADGAIIITRHMIDKLVVRSFAPCMKQM 308
Query: 285 FDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHN 344
LR +HHLK+G R Q GLFLKG+GL +++A+A + EF++K+ +++FDKEYAY+IR+
Sbjct: 309 HKHLRLNHHLKYGARRQYGLFLKGIGLSLDEAIAMMRDEFTKKITSDKFDKEYAYNIRYM 368
Query: 345 YGKEGKRTDYTPYSCQKII-SSTPGVGDHHGCPYRHFSEENLRAALGRMGVGSRAMEDVV 403
YGKEG+R SC II ++ P D HGCP+RH ++ L+ L V + D +
Sbjct: 369 YGKEGRRVPQKALSCATIILNNPPSAVDCHGCPFRHSEKQVLKQKLSSESVLKKEQVDRI 428
Query: 404 DKVRN-RHYQLACTLTFEAVH---SSSCDAGINHPNQYFSDSHKIL 445
++ Y ACT FE H I HPNQ++ +S KI+
Sbjct: 429 SELAELNQYDKACTRFFEFTHHLEEGELGQLITHPNQFYEESQKII 474
>gi|355713541|gb|AES04707.1| primase, DNA, polypeptide 2 [Mustela putorius furo]
Length = 275
Score = 232 bits (592), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 109/215 (50%), Positives = 148/215 (68%), Gaps = 3/215 (1%)
Query: 234 QERDRLTPIVEALSMSYLGPDYSQTKEFGEISIKDLDQLARSSFPLCMRHLFDKLREDHH 293
Q +RL P++ LS SY G DYS K G+IS+ +D L+ SFP CMR L LRE+HH
Sbjct: 10 QSDERLQPLLNHLSHSYTGQDYSTQKNAGKISLDQIDSLSTRSFPPCMRQLHKALRENHH 69
Query: 294 LKHGGRMQLGLFLKGVGLRMEDALAFWKAEFSQ-KVGAERFDKEYAYSIRHNYGKEGKRT 352
L+HGGRMQ GLFLKG+GL +E AL FWK EF + K+ ++FDK Y+Y+IRH++GKEGKRT
Sbjct: 70 LRHGGRMQYGLFLKGIGLTLEQALQFWKQEFIRGKMDPDKFDKGYSYNIRHSFGKEGKRT 129
Query: 353 DYTPYSCQKII-SSTPGVGDHHGCPYRHFSEENLRAALGRMGVGSRAMEDVVDKVRNRHY 411
DYTP+SC KII ++ P GD+HGCP+RH +E L+ L + + ++D V+ HY
Sbjct: 130 DYTPFSCMKIILTNPPSQGDYHGCPFRHSDQELLKQKLQSYKISPGGIHQILDLVKGTHY 189
Query: 412 QLACTLTFEAVHS-SSCDAGINHPNQYFSDSHKIL 445
Q+AC FE +H+ C ++HPNQ+F +S +IL
Sbjct: 190 QVACQKYFEMIHNVDDCGFSLSHPNQFFFESQRIL 224
>gi|392887413|ref|NP_001251922.1| Protein PRI-2, isoform a [Caenorhabditis elegans]
gi|14917028|sp|O02334.2|PRI2_CAEEL RecName: Full=DNA primase large subunit
gi|5824647|emb|CAB03469.2| Protein PRI-2, isoform a [Caenorhabditis elegans]
Length = 503
Score = 231 bits (588), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 148/474 (31%), Positives = 248/474 (52%), Gaps = 41/474 (8%)
Query: 5 RSQRSRTNTPNDSVSTLP-----------LYRYAPQLEVRLEDFEVFAMDRLRVLK---G 50
R+ R++ ++ S+ T P LY+ P ++ L +F+ AM+RL++LK
Sbjct: 14 RNVRTKISSNRQSIKTAPTKAAEIPEYLQLYQTPPGDDISLTEFDDIAMERLKLLKSFEN 73
Query: 51 ISDALARGKRPEEMENLVRDLWKANM------RHPEASEDV----NKDIISHFVLRLVYC 100
+ D+++ +E ++ R L + P E+V +D I HF+LRL +C
Sbjct: 74 LKDSVSLYN--DEFKDKFRKLCDGTKLIVFPDQKPPHQEEVYELWRRDNIGHFILRLAFC 131
Query: 101 RTEDLRKWFLSMETALYRYRFLLGSSEAKRALMEEFDLPCKAISRTEFENAKEKLEQVAR 160
RT + +KW +E R+R + + + + + + TE + E LE +
Sbjct: 132 RTPENQKWLTQIEGDFLRFRLRQEREQVLDSALANVNFTIEKLGYTEKQAMIEDLEAACQ 191
Query: 161 S--FDQPLPTADAIFYKVPFEEVPELVAGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSK 218
F+ P T FYKV F + EL+ V++ KG AY +V+++VT+ ++N+
Sbjct: 192 FNLFEAPNKT----FYKVDFIDAIELIRRGSVHLKKGFAYFPFDDLVTILVTKMKNNMMA 247
Query: 219 ALILTNRKWTSTIREQERDRLTPIVEALSMSYLGPDYSQTKEFGEISIKD--LDQLARSS 276
A+ + + I E+E L + + +Y G DY+ + G I + +D+L+R S
Sbjct: 248 AMARSFKHLA--ILEEEGRLLPRLSLLSNNAYSGKDYNGEQPDGSIIVTRHMIDKLSRRS 305
Query: 277 FPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWKAEFSQKVGAERFDKE 336
F CM+ + + LR +HHLK+G R Q GLFLKG+GL +++A+A + EF++K+ +++FDKE
Sbjct: 306 FAPCMKQMHNHLRVNHHLKYGARRQYGLFLKGIGLSLDEAIAMMRDEFTKKITSDKFDKE 365
Query: 337 YAYSIRHNYGKEGKRTDYTPYSCQKII-SSTPGVGDHHGCPYRHFSEENLRAALGRMGVG 395
Y Y+IR+ YGKEG+R T SC II + P D HGCP+RH ++ L+ LG +
Sbjct: 366 YGYNIRYMYGKEGRRVAQTAMSCATIILRNPPSAVDCHGCPFRHSEKQVLKQKLGSDAIL 425
Query: 396 SR-AMEDVVDKVRNRHYQLACTLTFEAVHS---SSCDAGINHPNQYFSDSHKIL 445
+ +E + + Y ACT FE +H+ I HPNQ++ +S KI+
Sbjct: 426 KKEQIERIAELAELNQYDKACTRYFEFMHNLEEGGLGQLITHPNQFYEESQKIV 479
>gi|66826903|ref|XP_646806.1| DNA polymerase alpha primase subunit [Dictyostelium discoideum AX4]
gi|74858176|sp|Q55BM5.1|PRI2_DICDI RecName: Full=DNA primase large subunit
gi|60474634|gb|EAL72571.1| DNA polymerase alpha primase subunit [Dictyostelium discoideum AX4]
Length = 470
Score = 230 bits (587), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 148/457 (32%), Positives = 237/457 (51%), Gaps = 24/457 (5%)
Query: 5 RSQRSRTNTPNDSVSTLPLYRYAPQLEVRLEDFEVFAMDRLRVLKGIS---DALARGKRP 61
+ S+T+T ND+ S L Y P + E + +DR +L +S D L+ K
Sbjct: 6 KKTNSQTSTSNDACSLL--YINVPDFNCNMSQIENYCIDRFNLLNEVSKLKDTLSAQKSN 63
Query: 62 EEMENLVRDLWKANMRHPEASEDVN---KDIISHFVLRLVYCRTEDLRKWFLSMETALYR 118
+N D + R +++D KD +SH+ LRL C + D R WF++ E+ L
Sbjct: 64 TSKDN--EDFRNLSSRFLGSTKDEQFKIKDELSHYCLRLAMCDSTD-RNWFITTESILLA 120
Query: 119 YRFLLGSSEAKRALMEEFDLPCKAISRTEFENAKEKLEQVARSFDQPLPTADAI-FYKVP 177
R L S+ + +S+ E+E ++ L + + + L + FYK+P
Sbjct: 121 NR--LNQSDLTTIISSFKGFGWSPVSQEEYEQYQDDLGYLVKKANLNLNEVNNTHFYKLP 178
Query: 178 FEEVPELVAGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERD 237
F+++P+L+ ++ I KG AY+ + +V+ F++ ++ AL K T ++E
Sbjct: 179 FQDIPKLIDTKKAIIIKGEAYIYISNFKDMVIHTFKNYMNFAL--DRIKADKTRIKEEFP 236
Query: 238 RLTPIVEALSMSYLGPDYSQTKEFGEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHG 297
L L + G + Q I +D+ L+++SFP+CMR ++D L E LK+
Sbjct: 237 ELIQFFTTLPKAGDGTNKPQLGNTKHIRKEDVSPLSKTSFPMCMRVMYDSLVETSSLKYE 296
Query: 298 GRMQLGLFLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTDYTPY 357
GR+Q G FLKG+GL ++A+ FW+ FS++V FDKEY Y+IRHNYG EGK T+Y+PY
Sbjct: 297 GRLQFGTFLKGIGLPYDEAINFWRIAFSKRVSNTDFDKEYLYNIRHNYGLEGKSTNYSPY 356
Query: 358 SCQKIISSTPGVGDH--HGCPYRHFSEENLRAALGRMGVGSRAMEDVVDKVRNRHYQLAC 415
SC +IIS +P GD HGCPY S E L L +G+ +++ + +AC
Sbjct: 357 SCPRIISKSPHNGDKLVHGCPYIQ-SLERLEQKLLDLGIDDFQRIQILEATKTSP-NVAC 414
Query: 416 TLTFEAVH-SSSCDAGINHPNQYFSDS---HKILQPK 448
T F +H +++ INHPNQ++ S +K L+ K
Sbjct: 415 TKHFNFLHPNNTLTKLINHPNQFYDQSMEYYKTLEEK 451
>gi|349605366|gb|AEQ00633.1| DNA primase large subunit-like protein, partial [Equus caballus]
Length = 276
Score = 230 bits (586), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 108/215 (50%), Positives = 146/215 (67%), Gaps = 3/215 (1%)
Query: 234 QERDRLTPIVEALSMSYLGPDYSQTKEFGEISIKDLDQLARSSFPLCMRHLFDKLREDHH 293
Q +RL P++ LS SY+G DYS G+IS+ +D L+ SFP CMR L LRE+HH
Sbjct: 10 QSDERLQPLLNHLSHSYIGQDYSIQGNAGKISLDQIDSLSTKSFPPCMRQLHKALRENHH 69
Query: 294 LKHGGRMQLGLFLKGVGLRMEDALAFWKAEFSQ-KVGAERFDKEYAYSIRHNYGKEGKRT 352
L+HGGRMQ GLFLKG+GL +E AL FWK EF + K+ ++FDK Y+Y+IRH++GKEGKRT
Sbjct: 70 LRHGGRMQYGLFLKGIGLTLEQALQFWKQEFIKGKMDPDKFDKGYSYNIRHSFGKEGKRT 129
Query: 353 DYTPYSCQKII-SSTPGVGDHHGCPYRHFSEENLRAALGRMGVGSRAMEDVVDKVRNRHY 411
DYTP+SC KII ++ P GD+HGCP+RH E L+ L + + ++D V+ HY
Sbjct: 130 DYTPFSCLKIILTNPPSQGDYHGCPFRHSDPELLKQKLQSYKITPGGISQILDLVKGTHY 189
Query: 412 QLACTLTFEAVHS-SSCDAGINHPNQYFSDSHKIL 445
Q+AC FE H+ C +NHPNQ+F +S ++L
Sbjct: 190 QVACQKYFEMTHNVDDCGFSLNHPNQFFVESQRVL 224
>gi|448122788|ref|XP_004204532.1| Piso0_000383 [Millerozyma farinosa CBS 7064]
gi|448125069|ref|XP_004205090.1| Piso0_000383 [Millerozyma farinosa CBS 7064]
gi|358249723|emb|CCE72789.1| Piso0_000383 [Millerozyma farinosa CBS 7064]
gi|358350071|emb|CCE73350.1| Piso0_000383 [Millerozyma farinosa CBS 7064]
Length = 515
Score = 230 bits (586), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 153/474 (32%), Positives = 248/474 (52%), Gaps = 54/474 (11%)
Query: 21 LPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEEMENLVRDLWKANMR-HP 79
L Y P E+ +E+FE +A+DRL+VL I +AR K +++E +V+ L + P
Sbjct: 37 LSFYDVPPIEEITIEEFETWAIDRLKVLIEIESCVARSKSLKDIEAVVKPLLLKYLPLSP 96
Query: 80 EASEDVN-------KDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKRAL 132
++ + KD SH++LRLV+CR+++LRK F+ ET L++ R+ + + ++
Sbjct: 97 DSGSNQGHVMNERRKDHYSHYILRLVFCRSDELRKKFVKNETILFKVRYNMMQPKEQQEF 156
Query: 133 MEEFD--LPCKAIS---RTEF------------------ENAKEKLEQVARSFDQPLPTA 169
+E LP IS +TE E+ K+ + S Q + +
Sbjct: 157 IETNKDRLPWSYISNEEKTELLDDLFHASGSSIRAVLAAESGDPKMNISSDSLMQHIKSK 216
Query: 170 DAIFYKVPFEEVPELVAGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTS 229
+ F K+PF +VP LVA R+ I KG AY+ ++L+ +F+ L++ L+ R + +
Sbjct: 217 EN-FIKLPFVKVPNLVASRQTLIRKGQAYIPSILQLNLLSIEFQDALNRDLL---RTFQA 272
Query: 230 TIREQERDRLTPIVEALSMSYLGPDYSQTKEFGEISIKDLDQLARSS------FPLCMRH 283
R ++ DR+ P++ LS ++ Y + D++ + ++ FPLC H
Sbjct: 273 IPRLEDDDRILPLLNNLSYNFSNIQYESSYANDSSLASDINAQSVTTPEITKHFPLCALH 332
Query: 284 LFDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWKAEF---SQKVGAERFDKEYAYS 340
L L + HL++ GR QLGLFLKG+GL +++AL FW +F S + E+++KEY Y+
Sbjct: 333 LQKNLVLNSHLRYQGRQQLGLFLKGIGLNVDEALKFWSYQFTKSSSSMSIEKYNKEYKYN 392
Query: 341 IRHNYGKEGKRTDYTPYSCQKIISS-TPGVGDHHGCPYRHFSEENLRAALGRMGVGSRA- 398
+RH YG EG R Y P+ C +I+S PG G++HGCPYR S + L + L +G +
Sbjct: 393 VRHTYGLEGARIHYKPWDCARILSKPKPGKGEYHGCPYRDMSVDALVSNLNDLGFTDQVD 452
Query: 399 MEDVVDKVRNRHYQLACTLTFEAVHSSSCDAG--------INHPNQYFSDSHKI 444
+ +V+D V Y +ACT FE H D I+HPN YF S ++
Sbjct: 453 LNNVIDDVGRNDYTVACTRVFEITHKKQLDRNKASAEALHISHPNLYFDRSRQL 506
>gi|452846400|gb|EME48332.1| hypothetical protein DOTSEDRAFT_67420 [Dothistroma septosporum
NZE10]
Length = 506
Score = 229 bits (583), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 148/458 (32%), Positives = 234/458 (51%), Gaps = 51/458 (11%)
Query: 21 LPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEEMENLVRDLWKANM---- 76
+ Y P +V LE+FE + + RL+VL + R K PEE +R + ++
Sbjct: 38 MNFYAIPPTGDVTLEEFEEWGIARLKVLAELEACQFRNKSPEETAEYMRLILAKHLPLSS 97
Query: 77 ---RHPEASEDVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKRALM 133
R E S + +D SH++LRL + T+DLR+ F +E L++ R +R +
Sbjct: 98 NSSRSGEISLERKRDHYSHWILRLAFSSTQDLRQRFTRLEAQLFKLRIAQDDLRERREFI 157
Query: 134 EEFDLPCKAISRTEFENAKEKLEQVARSFDQPLPTADAIFYKVPFEEVPELVAGRRVYIH 193
E + + + E E L+ + + ++K +E VPELV R+V +
Sbjct: 158 ESLPMSWQVVGEEEKSTLLEDLKAATNCRKED----EQSWFKCEWENVPELVERRQVLLK 213
Query: 194 KGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEALSMSYLGP 253
+G AYV + + +++VV +F L L L R R E +RL PI+ LS S++ P
Sbjct: 214 RGKAYVHVREQMNMVVNEFSRQLESGLELAAR---FLPRMDEDNRLAPILHHLSQSFVAP 270
Query: 254 D--YSQTKEFGEISIKDLDQLARSS-------FPLCMRHLFDKLREDHHLKHGGRMQLGL 304
D Y+++ S+ D+ + +S FPLCM++L +LR++ HLKH R+Q L
Sbjct: 271 DAGYAESS-----SLSDMTNVTAASIDGQSQHFPLCMQNLHRELRKNSHLKHYARLQYTL 325
Query: 305 FLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTD-----YTPYSC 359
FLKG+GL +++ + FW+ F + + ++F EY Y+IRH YG G ++ YTPYSC
Sbjct: 326 FLKGIGLSLQECILFWRKSF-KLITDDKFKSEYLYNIRHAYGDVGGDSNRRGRGYTPYSC 384
Query: 360 QKIIS-STPGVGDHHGCPYRHFSEENLRAALGRMGVGSRA-MEDVVDKVRNRHYQLACTL 417
QK+++ + P G +GCPYR +S +NL A L +GV R ++ V + V + Y +AC
Sbjct: 385 QKLLTEALPSSGQQNGCPYRTYSPDNLVALLQSVGVSDRELLKGVREDVGRQRYHIACNR 444
Query: 418 TFEAVH--------------SSSCDAGINHPNQYFSDS 441
FE+ H +S D I HPN YF S
Sbjct: 445 VFESTHKNEMKKVKDESLWPASELDT-ILHPNTYFKRS 481
>gi|440902782|gb|ELR53529.1| DNA primase large subunit, partial [Bos grunniens mutus]
Length = 340
Score = 227 bits (578), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 127/311 (40%), Positives = 186/311 (59%), Gaps = 10/311 (3%)
Query: 20 TLPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISD-ALARGKRPEEMEN-LVRDLWKANMR 77
+L Y P V L +FE A+DR+++LK + + L+ K E+ ++ L +L K
Sbjct: 25 SLQFYLQPPSGNVSLTEFETLAIDRVKLLKSVENLGLSYMKGTEQYQSKLEAELRKLKFS 84
Query: 78 HPEASEDV----NKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKRALM 133
+ E+ ED KD ISHF+LRL YC++EDLR+WF+ E L R+RF + + ++ +
Sbjct: 85 YRESLEDEYEPRRKDHISHFILRLAYCQSEDLRRWFIQQEMDLLRFRFSILPKDKIQSFL 144
Query: 134 EEFDLPCKAISRTEFENAKEKLEQVARSFDQPLPTADAIFYKVPFEEVPELVAGRRVYIH 193
++ L +AIS E ++ + + SF +++ YK+PF E +L GR+VY+
Sbjct: 145 KDSHLQFEAISDEEKTVREQDIIASSSSFGGAQLDLESV-YKIPFAEALDLFRGRKVYLE 203
Query: 194 KGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEALSMSYLGP 253
G AYV +V++++ +FR+ LSKAL LT R + Q +RL P++ LS SY G
Sbjct: 204 NGFAYVPHKDIVAIILNEFRTKLSKALALTARSLPAV---QSDERLQPLLNHLSHSYTGQ 260
Query: 254 DYSQTKEFGEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRM 313
DYS G+IS+ +D L+ SFP CMR L LRE+HHL+HGGRMQ GLFLKG+GL +
Sbjct: 261 DYSTQGNAGKISLDQIDSLSTKSFPPCMRQLHKALRENHHLRHGGRMQYGLFLKGIGLTL 320
Query: 314 EDALAFWKAEF 324
E AL FWK EF
Sbjct: 321 EQALQFWKQEF 331
>gi|45185285|ref|NP_983002.1| ABR056Cp [Ashbya gossypii ATCC 10895]
gi|44980943|gb|AAS50826.1| ABR056Cp [Ashbya gossypii ATCC 10895]
gi|374106205|gb|AEY95115.1| FABR056Cp [Ashbya gossypii FDAG1]
Length = 489
Score = 226 bits (575), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 149/450 (33%), Positives = 224/450 (49%), Gaps = 38/450 (8%)
Query: 19 STLPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEEMENLVRDLWKANMRH 78
+ L Y P E+ L+ FE +A+DRL+VL + + R + E+E ++ L +
Sbjct: 42 AKLSFYALPPVGEITLDQFETWAIDRLKVLLELESLIQRNRAGRELEQAMKPLLGKLLPL 101
Query: 79 PEASEDVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKRALMEEFDL 138
E E KD SHF+LRL +CRT +LR+ F+ ETAL+R RF + +S + ++ DL
Sbjct: 102 GEEQEARRKDYYSHFILRLCFCRTAELRERFVRAETALFRLRFQMLTSADQARFVQSLDL 161
Query: 139 PCKAISRTEFENAKEKLEQVARSFDQPLP--------TADAI---------FYKVPFEEV 181
P +F + EK A+ +D P T +A F K+PFE V
Sbjct: 162 PL-----VQFIDEAEKQALGAQLYDAVAPQLLHQLQLTDEAQRRQFFQHERFLKLPFESV 216
Query: 182 PELVAGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTP 241
+LV R V + G AY+ ++ + ++ + L+ L T + + + DRL P
Sbjct: 217 IDLVGPRHVLLRGGWAYLPQFMQLNHIAAEYAARLATDLRATYQHLPALAGD---DRLPP 273
Query: 242 IVEALSMSYLGPDYSQTKEFGEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQ 301
I+ LS ++ G + + R++ PLC R L D L +HHL++ GR Q
Sbjct: 274 ILAHLSAGHVVAPPPPPTGGGLTAADLAAEPVRAALPLCARGLLDGLAANHHLRYLGRQQ 333
Query: 302 LGLFLKGVGLRMEDALAFWKAEFSQ-KVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQ 360
L LFLKG G+ +DAL FW F+ +RF++EY Y++RH YG EG R +Y P+ C+
Sbjct: 334 LALFLKGAGMSADDALRFWADAFTAGPTSLDRFNREYRYALRHTYGLEGNRINYRPWDCR 393
Query: 361 KIISST-PGVGDHHGCPYRHFSEENLRAALGRMGVGSRAMEDVVDKVRNRHYQLACTLTF 419
I++ P + HGCPYR ++ + L AAL M + A+ V D R Y LACT F
Sbjct: 394 TILAKPRPARNEFHGCPYRDWAPDRLAAALAAMQLAPPAVAAVRDACARREYTLACTHVF 453
Query: 420 EAVHSSSCDAG-----------INHPNQYF 438
+A H + I HPNQ+F
Sbjct: 454 DACHGHVAPSAPGHVPAPDMSHIVHPNQFF 483
>gi|332022561|gb|EGI62863.1| DNA primase large subunit [Acromyrmex echinatior]
Length = 505
Score = 224 bits (570), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 147/456 (32%), Positives = 221/456 (48%), Gaps = 32/456 (7%)
Query: 11 TNTPNDSV-STLPLYRYAPQLEVRLEDFEVFAMDRLRVLK----------GISDALARGK 59
+ P DS L LYR P E+ LE+ + + RL+VL +S + R
Sbjct: 11 SRNPGDSYPHNLQLYRNVPFGEITLEELQEISETRLKVLSLVERIHLQKPTMSLSQRRIA 70
Query: 60 RPEEMENLVRDLWKANMRHPEASEDVNKDI-------ISHFVLRLVYCRTEDLRKWFLSM 112
EE+ + + +++ + DI ISHF+LR E ++WF
Sbjct: 71 LVEELHKQGLAEFGSLIKNSGCKSCTDMDIRVRRRDHISHFMLRSTVAFNESKKRWFFKQ 130
Query: 113 ETALYRYRFLLGSSEAKRALMEEFDLPCKAISRTEFENAKEKLEQVARSFDQPLPTADAI 172
E L+++RF +E R M + IS+ E EN +E L + + +
Sbjct: 131 EARLFKWRFSSLDNEGIRQFMCINNFNFSPISQNEKENIREHLHMSSLNVSD---VDNTQ 187
Query: 173 FYKVPFEEVPELVAGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIR 232
FY++PF + L+ R+V + +G A+V ++ + V+ FR ++++N + R
Sbjct: 188 FYRIPFFHIANLIRKRKVLVLQGEAFVPEQEMAFVFVSYFRR-----ILISNFEVAREAR 242
Query: 233 EQ--ERDRLTPIVEALSMSYLGPDYSQTKEF---GEISIKDLDQLARSSFPLCMRHLFDK 287
+R T I L + L + +E IS+ LDQLA +S+PLCMR L
Sbjct: 243 ANLYNDERFTHIFAYLENNILTQNTVLVREQEMQQYISLDKLDQLAETSYPLCMRVLHKA 302
Query: 288 LREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGK 347
LR++HHL HGGR+Q LFLKG+GL + DA+ FWK EF + + F KE+ Y IR NYGK
Sbjct: 303 LRKNHHLTHGGRIQYCLFLKGMGLSLSDAMTFWKDEFMKIMDDTAF-KEHMYYIRFNYGK 361
Query: 348 EGKRTDYTPYSCQKIISSTPGVGDHHGCPYRHFSEENLRAALGRMGVGSRAMEDVVDKVR 407
EG R DY PY CQ+I+ S G D+HGCP++H + L L + ++ +
Sbjct: 362 EGSRRDYQPYKCQRILESIVGPRDYHGCPFKHMLHDTLEEQLTDCDFNASERSAIMKLSK 421
Query: 408 NRHYQLACTLTFEAVHSSSCDAGINHPNQYFSDSHK 443
N Y AC +E H D HPN YF++S K
Sbjct: 422 NGQYFAACNKYYEIKHDCLNDTLFEHPNIYFNESMK 457
>gi|449298579|gb|EMC94594.1| hypothetical protein BAUCODRAFT_35825 [Baudoinia compniacensis UAMH
10762]
Length = 503
Score = 224 bits (570), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 148/452 (32%), Positives = 238/452 (52%), Gaps = 43/452 (9%)
Query: 23 LYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEEMENLVRDLWKANMR-HPEA 81
+Y P ++ LE FE +A+ RL+VL + R + +E ++ + ++R P +
Sbjct: 41 MYPIPPLDDITLEQFEEWAIARLKVLAELEACQFRNRTADETAEYMKPVLDKHLRLSPNS 100
Query: 82 SE------DVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKRALMEE 135
S+ + +D SH+ LRL + T DLR+ F +E L++ R L ++ ++A +E
Sbjct: 101 SQSSEVEVERKRDHYSHWTLRLAFSATADLRQRFSRLEAQLFKLRLRLDRADERKAFIES 160
Query: 136 FDLPCKAISRTEFENAKEKLEQVARSFDQPLPTADAIFYKVPFEEVPELVAGRRVYIHKG 195
+ + + TE E E VA + + + ++K +E VP+LV R+ + KG
Sbjct: 161 LPMSWEVV--TEEEKKTWHSELVAATGLRR--DEEESWFKTEWEHVPDLVERRQCLLKKG 216
Query: 196 HAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEALSMSYLGPD- 254
AYV + + ++VV +F L L R R E +RL+PI+ LS S++ PD
Sbjct: 217 KAYVHVREQQTMVVNEFARQLELGLEQAAR---FLPRMDEDNRLSPILHHLSQSFVAPDA 273
Query: 255 -YSQTKEFGEISI---KDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVG 310
Y++ G+I+ +D L++ FPLCM++L +LR+++HLKH GR+Q LFLKG+G
Sbjct: 274 GYTEASSIGDITTPTAASIDGLSQH-FPLCMQNLHRELRKNNHLKHFGRLQYTLFLKGIG 332
Query: 311 LRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTD-----YTPYSCQKIISS 365
L +++ + FW+ F + + ++F EY Y+IRH YG+ G + YTPYSCQK+++
Sbjct: 333 LSLQECIIFWRKSF-KLIADDKFKAEYLYNIRHAYGEVGGDANRRGRGYTPYSCQKLLTE 391
Query: 366 -TPGVGDHHGCPYRHFSEENLRAALGRMGVGSRA-MEDVVDKVRNRHYQLACTLTFEAVH 423
P G HGCPYR ++ +NL L GV RA ++ V + V + Y +AC FE H
Sbjct: 392 PAPAAGQTHGCPYRTYAPDNLITLLQSFGVTDRALLQGVREDVGKQRYHIACNRVFEHAH 451
Query: 424 --------------SSSCDAGINHPNQYFSDS 441
+S D I HPN YF S
Sbjct: 452 KGPIKKVKDEALWPASELDT-ILHPNGYFKRS 482
>gi|325186552|emb|CCA21093.1| DNA primase putative [Albugo laibachii Nc14]
Length = 430
Score = 223 bits (569), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 133/416 (31%), Positives = 215/416 (51%), Gaps = 28/416 (6%)
Query: 23 LYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEEMENLVRDLWKANMRH---- 78
Y P LE+FE ++ RL VL I +E +N +DL++ M++
Sbjct: 4 FYPNPPNEPFTLEEFEFYSHCRLEVLLAIHHI-------KEHQN-GKDLYEECMKNVSQD 55
Query: 79 -PEASEDVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKRALMEEFD 137
+ +++ +D SH++LR+ C ++ +WF+ MET L+R R + + +AL + F
Sbjct: 56 AQQVMQNMAQDSYSHYILRVAACVSK-WTEWFIDMETKLFRMR--ICREDCVQALHQAFA 112
Query: 138 LPCKAISRTEFENAKEKLEQVARSFDQPLPTADAIFYKVPFEEVPELVAGRRVYIHKGHA 197
+ + ++ F++ + R+ + FY VPF E +L+ RRV I G
Sbjct: 113 VSYRIVA---FDSLTHSEKNWMRATTSQNDIHKSRFYMVPFTECNDLIRDRRVLIRDGFC 169
Query: 198 YVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEALSMSYLGPDYSQ 257
+ ++ ++ FRS + + K + +QE RLT I + L+ Y Y+
Sbjct: 170 VLPKKDLIHVICYHFRSKIVSQM--KTLKKGLAVHQQEIKRLTFIFDKLTSYYASKTYTA 227
Query: 258 TKEFGE------ISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGL 311
T + +++ +D +A +PLCM+HL DKLRE HHLK+ GR+Q LFLK +G
Sbjct: 228 TYQQAHEGPPFHFTLETIDHVASRHYPLCMQHLHDKLREHHHLKYNGRLQYRLFLKSLGF 287
Query: 312 RMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQKII-SSTPGVG 370
++E+ L FW EF++K+ F K YAYSIRH YG EG R D+ PY+CQ++ S+ P G
Sbjct: 288 KVEENLRFWNTEFTKKISEAEFQKRYAYSIRHTYGLEGGRKDFEPYNCQQLSDSAPPKSG 347
Query: 371 DHHGCPYRHFSEENLRAALGRMGVGSRAMEDVVDKVRNRHYQLACTLTFEAVHSSS 426
+HGCP++H+S L L +G + ++ +Q AC L FEA+H S
Sbjct: 348 QYHGCPFKHWSSATLEVNLNEKKIGRDKIIPIIKASEYGKHQTACQLYFEAMHPLS 403
>gi|301122835|ref|XP_002909144.1| DNA primase, putative [Phytophthora infestans T30-4]
gi|262099906|gb|EEY57958.1| DNA primase, putative [Phytophthora infestans T30-4]
Length = 423
Score = 223 bits (567), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 147/441 (33%), Positives = 222/441 (50%), Gaps = 54/441 (12%)
Query: 23 LYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEEMENLVRDLWKANMRHPEAS 82
YR PQ V L++F+ R+++L + AL K P++M N +L
Sbjct: 7 FYRSPPQQRVSLDNFQELGRQRVKLL---TQAL---KPPKDMLNEATEL----------Q 50
Query: 83 EDVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKRALMEEFDLPCKA 142
E + D++SH+ LRL +CR W + E L+ R R L P A
Sbjct: 51 EGTDTDLLSHYALRLAFCRVSSGWDWLVRAEAKLFAARL--------RKLP-----PYTA 97
Query: 143 ISRTEFENAKEKLEQVARSFDQP-LPTADAIFYKVPFEEVPELVAGRRVYIHKGHAYVAM 201
++ E E K +L + D P L Y+VPF E P LV R V IH G V +
Sbjct: 98 VAVLEREGIKHEL----LNEDNPDLDKTQGGIYRVPFAEAPRLVKYREVVIHDGFCLVPL 153
Query: 202 HQVVSLVVTQFRSNLSKALILTNRKWTSTIREQ--ERDRLTPI-----VEALSMSYLGPD 254
++ + V FR L + + R I Q E +RLTPI VEA ++
Sbjct: 154 RRMDVVAVYHFRRCLEEQM----RDLQCAIPAQGPELERLTPILDGFVVEARVLTGTATS 209
Query: 255 YSQTKEFGEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRME 314
++ + ++ +K++D++A FPLCM+ L KLRE+HHLK+ GR+Q +FLKG G +
Sbjct: 210 LAKKADRSKLEVKEIDRVAEKHFPLCMKQLHRKLRENHHLKYDGRVQYRMFLKGAGFSVH 269
Query: 315 DALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQKIIS-STPGVGDHH 373
+ + F+++EF + + A +FDKEY Y IRH+YG EG R DY P C++IIS P G +H
Sbjct: 270 ECIQFFRSEFIKTIPAAKFDKEYTYHIRHSYGLEGSRKDYAPLDCEQIISGGAPSHGQYH 329
Query: 374 GCPYRHFSEENLRAALGRMGVGSRAMEDVVDKVRNRHYQLACTLTFEAVHSSSCDAGINH 433
GCP++H+ L+ L R G+ + ++ + + Q AC FEA HSS+
Sbjct: 330 GCPFKHWGRPALQDELRRHGLSLQTTMEITQQASAGNCQSACRAFFEATHSSTAS----- 384
Query: 434 PNQY-FSDSHKILQPKNNNAA 453
P Q+ F+ +H L +N +A
Sbjct: 385 PAQFAFNAAH--LSHQNGSAG 403
>gi|413916165|gb|AFW56097.1| hypothetical protein ZEAMMB73_117262 [Zea mays]
Length = 194
Score = 221 bits (564), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 111/168 (66%), Positives = 129/168 (76%), Gaps = 4/168 (2%)
Query: 1 MEIVRSQRS----RTNTPNDSVSTLPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALA 56
MEIVRSQR + LP Y+ APQLEVRLE+FE+FA+DRLRVLKGISD L+
Sbjct: 1 MEIVRSQRQVAAAASGGGGGGAGALPTYKAAPQLEVRLEEFELFAIDRLRVLKGISDGLS 60
Query: 57 RGKRPEEMENLVRDLWKANMRHPEASEDVNKDIISHFVLRLVYCRTEDLRKWFLSMETAL 116
RGKRPEEME LV +LWK +MRH + +E++NKDIISHFVLRLVYCRTE+LRKWFLSMET L
Sbjct: 61 RGKRPEEMEKLVSELWKTHMRHQDPAENLNKDIISHFVLRLVYCRTEELRKWFLSMETTL 120
Query: 117 YRYRFLLGSSEAKRALMEEFDLPCKAISRTEFENAKEKLEQVARSFDQ 164
+RYRF L S E +R LM EF LP KA+ +EFE K+KL QVARS Q
Sbjct: 121 FRYRFRLESPETQRMLMTEFQLPYKALPYSEFEAVKDKLSQVARSIGQ 168
>gi|281345791|gb|EFB21375.1| hypothetical protein PANDA_015724 [Ailuropoda melanoleuca]
Length = 256
Score = 219 bits (557), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 103/203 (50%), Positives = 139/203 (68%), Gaps = 3/203 (1%)
Query: 246 LSMSYLGPDYSQTKEFGEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLF 305
S SY G DYS K G+IS+ +D L+ SFP CMR L LR++HHL+HGGRMQ GLF
Sbjct: 2 FSHSYTGQDYSTQKNAGKISLDQIDSLSTKSFPPCMRQLHKALRDNHHLRHGGRMQYGLF 61
Query: 306 LKGVGLRMEDALAFWKAEFSQ-KVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQKII- 363
LKG+GL +E AL FWK EF + K+ ++FDK Y+Y+IRH++GKEGKRTDYTP+SC KII
Sbjct: 62 LKGIGLTLEQALQFWKQEFIRGKMDPDKFDKGYSYNIRHSFGKEGKRTDYTPFSCLKIIL 121
Query: 364 SSTPGVGDHHGCPYRHFSEENLRAALGRMGVGSRAMEDVVDKVRNRHYQLACTLTFEAVH 423
++ P GD+HGCP+RH E L+ L + + ++D V+ HYQ+AC FE +H
Sbjct: 122 TNPPSQGDYHGCPFRHSDPELLKQKLQSYKISPGGIHQILDLVKGSHYQVACQKYFEMIH 181
Query: 424 S-SSCDAGINHPNQYFSDSHKIL 445
+ C ++HPNQ+F +S +IL
Sbjct: 182 NVDDCGFSLSHPNQFFFESQRIL 204
>gi|241955040|ref|XP_002420241.1| subunit of DNA primase, putative [Candida dubliniensis CD36]
gi|223643582|emb|CAX42464.1| subunit of DNA primase, putative [Candida dubliniensis CD36]
Length = 646
Score = 216 bits (551), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 158/503 (31%), Positives = 239/503 (47%), Gaps = 75/503 (14%)
Query: 19 STLPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEEMENLVRD-------- 70
S L Y P E+ LE FE +A+DRL++L I LAR K +E+E+ ++
Sbjct: 120 SRLSFYDLPPIQEITLEQFETWAIDRLKILIEIESCLARSKSLKEIESYIKPLLLKYLPL 179
Query: 71 -----LWKANMRHPEASEDVN------KDIISHFVLRLVYCRTEDLRKWFLSMETALYRY 119
L ++ + N KD SHF+LRLV+CR E+LRK F+ ET L++
Sbjct: 180 NPSPGLLSTTTTTIDSQSNNNYILERMKDHYSHFILRLVFCRNEELRKNFIKNETILFKI 239
Query: 120 RFLLGSSEAKRALME--EFDLPCKAISRTE-------FENAKEKLEQVARSFDQPLPTAD 170
R+ L + ++ +E L + I+ E N+ L + D T D
Sbjct: 240 RYNLLQPKEQQEFIELNHHKLNWQYITSEEKIQLNQQLFNSSGNLIKNQFLLDGENLTND 299
Query: 171 AI---------FYKVPFEEVP--ELVAGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKA 219
+ F K+PFE++ L+ R +Y+ KG+ Y+ ++L+ +F L+
Sbjct: 300 QLKKFIMFKENFIKLPFEKISTNNLINNRSIYLFKGYGYLPSCLQLNLLSIEFNKILNDN 359
Query: 220 LILTNRKWTSTIREQERDRLTPIVEALSMSYLGPDYS-----QTKEFGEISIKDLDQLAR 274
LI T + T I E E DRL P++ LS ++ Y + D A+
Sbjct: 360 LIKTFQ--TIPILE-EDDRLLPLLNNLSKNFKNFQYEYEYDQNQINNNNNDNLNSDINAK 416
Query: 275 S--------SFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWKAEF-- 324
S +PLC ++L L + HLK+GGR QLGLFLKG+GL +++A+ FW +F
Sbjct: 417 SIITSKIINHYPLCAQNLQRNLIINSHLKYGGRQQLGLFLKGIGLNIDEAIKFWSYQFTK 476
Query: 325 SQKVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQKIISST-PGVGD--HHGCPYRHFS 381
S + E F+K+Y Y+IRH YG EG R +Y P+ C I+S P + +HGCPYR F+
Sbjct: 477 SNSLSLETFNKDYKYNIRHQYGLEGARINYKPWDCSIILSKPRPNYKNLEYHGCPYRDFN 536
Query: 382 EENLRAALGRMGVGSRA-MEDVVDKVRNRHYQLACTLTFEAVHSSSCDAG---------- 430
+ L L MG+ + + ++D V Y +ACT FE H
Sbjct: 537 LDVLINNLNNMGITDQQDLNTIIDDVNKHDYTIACTRVFELTHEKQLKKIKEKNNNNNIN 596
Query: 431 ----INHPNQYFSDSHKILQPKN 449
INHPN YF S ++ + +N
Sbjct: 597 SMMHINHPNLYFDRSRQLERSEN 619
>gi|348675908|gb|EGZ15726.1| hypothetical protein PHYSODRAFT_506675 [Phytophthora sojae]
Length = 433
Score = 216 bits (549), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 140/451 (31%), Positives = 213/451 (47%), Gaps = 54/451 (11%)
Query: 18 VSTLPLYRYAPQLEVRLEDFEVFAMDRLRVLKGIS---DALARGKRPEEMENLVRDLWKA 74
+ L YR APQ V L+DFE R+++L +S A P+ + L
Sbjct: 2 TAPLSFYRRAPQQRVALDDFEELGHRRVKLLSQVSARWSAQQSTVDPQTQKAL------- 54
Query: 75 NMRHPEASEDVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKRALME 134
E +D N D +SH+ LRL +CR W ++ E+ L+ R A++
Sbjct: 55 -----EVGDDTNADQLSHYALRLAFCRVSSGWDWLVTAESRLFAARLRCQPPYTAVAVLS 109
Query: 135 EFDLPCKAISRTEFENAKEKLEQVARSFDQPLPTADAIFYKVPFEEVPELVAGRRVYIHK 194
+ R E NA D + Y+VPF E P LV R V +
Sbjct: 110 SERI------RYELLNAD----------DSEIDVTQQGIYRVPFMEAPALVKHRDVIVRD 153
Query: 195 GHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQ--ERDRLTPIVEALSM---S 249
G V + ++ S+ V FR L + + R I Q E +RL PI++ + +
Sbjct: 154 GFCLVPLRRMGSVAVYHFRRCLEEQI----RDLQCAIPAQGHELERLAPILDGFVVEART 209
Query: 250 YLGPDYSQTKEFG--EISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLK 307
G S TK G ++ + +D +A+ FPLCM+ L KLRE+HHLK+ GR+Q +FLK
Sbjct: 210 LAGSANSITKNSGRPKLEVAKMDSVAQKHFPLCMKQLHRKLRENHHLKYDGRVQYRMFLK 269
Query: 308 GVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQKII-SST 366
G G + + + F++ EF + + A +FDKEY Y IRH+YG EG R DY P C++II
Sbjct: 270 GAGFSVHECIQFFRKEFIKTIPAAKFDKEYTYHIRHSYGLEGSRKDYEPLDCEQIIGGGA 329
Query: 367 PGVGDHHGCPYRHFSEENLRAALGRMGVGSRAMEDVVDKVRNRHYQLAC----------T 416
P G +HGCP++H+ L+ L R G+ + ++ + + H Q AC
Sbjct: 330 PSNGQYHGCPFKHWGRPALQQELRRHGLSLQTAMEITQQASSGHCQSACRAFFNATHPAG 389
Query: 417 LTFEAVHSSSCDAGINHPNQYFSDSHKILQP 447
T++ HSS D I+ P + D+ ++ P
Sbjct: 390 FTYKTAHSSHQDTSIS-PGRRHLDADIVMHP 419
>gi|332824338|ref|XP_001147112.2| PREDICTED: DNA primase large subunit, partial [Pan troglodytes]
Length = 349
Score = 214 bits (546), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 126/316 (39%), Positives = 186/316 (58%), Gaps = 22/316 (6%)
Query: 21 LPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISD-ALARGKRPEEMEN-LVRDLWKANMRH 78
L Y P + L +FE A+DR+++LK + + ++ K E+ ++ L +L K +
Sbjct: 26 LQFYLQPPSENISLIEFENLAIDRVKLLKSVENLGVSYVKGTEQYQSKLESELRKLKFSY 85
Query: 79 PEASEDV----NKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKRALME 134
E ED +D ISHF+LRL YC++E+LR+WF+ E L R+RF + + + ++
Sbjct: 86 RENLEDEYEPRRRDHISHFILRLAYCQSEELRRWFIQQEMDLLRFRFSILPKDKIQDFLK 145
Query: 135 EFDLPCKAISRTEFENAKEKLEQVARSFDQPLPTADAI------FYKVPFEEVPELVAGR 188
+ L +AIS E + +E+ E VA S P+ + YK+PF + +L GR
Sbjct: 146 DSQLQFEAISDEE-KTLREQ-EIVASS-----PSLSGLKLGFESIYKIPFADALDLFRGR 198
Query: 189 RVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEALSM 248
+VY+ G AYV + +V++++ +FR+ LSKAL LT R + Q +RL P++ LS
Sbjct: 199 KVYLEDGFAYVPLKDIVAIILNEFRAKLSKALALTARSLPAV---QSDERLQPLLNHLSH 255
Query: 249 SYLGPDYSQTKEFGEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKG 308
SY G DYS G+IS+ +D L+ SFP CMR L LRE+HHL+HGGRMQ GLFLKG
Sbjct: 256 SYTGQDYSTQGNVGKISLDQIDLLSTKSFPPCMRQLHKALRENHHLRHGGRMQYGLFLKG 315
Query: 309 VGLRMEDALAFWKAEF 324
+GL +E AL FWK EF
Sbjct: 316 IGLTLEQALQFWKQEF 331
>gi|209876870|ref|XP_002139877.1| DNA primase, large subunit family protein [Cryptosporidium muris
RN66]
gi|209555483|gb|EEA05528.1| DNA primase, large subunit family protein [Cryptosporidium muris
RN66]
Length = 512
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 140/478 (29%), Positives = 236/478 (49%), Gaps = 66/478 (13%)
Query: 32 VRLEDFEVFAMDRLRVLKGISDALARGKRPEEME----NLVRDLW--KANMRHPEASEDV 85
+ + FE + MDRL +L I + +E N++ DL+ + + P+ ++ +
Sbjct: 41 LSINKFEEYIMDRLSILHFIDNKCNNDDNKSLLESNNKNII-DLYLSEKGFKLPDINKII 99
Query: 86 NK---------------------DIISHFVLRLVYCRTEDLRKWFLSMETALYRYRF--L 122
NK D ISHF L+LVY D + WF+ E L ++ +
Sbjct: 100 NKENSQINNINKYYEIIEEIFIKDAISHFFLKLVYLNNRDKQDWFIKQEIRLMIFKLSNI 159
Query: 123 LGSSEAKRA-------------LMEEFDLPCKAISRTEFENAKEKLEQVARSFDQPLPTA 169
+ S+ ++ ++ F + + N KE E + +P
Sbjct: 160 INSNVFTKSYNINKKIEIINKLMISNFGDNYPFLYYDDILNNKE-YEDIWYKAISIIPNG 218
Query: 170 DAI--FYKVPF-EEVPELVAGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKAL-ILTNR 225
+ I KVPF + + RR +I G Y+ +++ +L +++F+ +L + +L N
Sbjct: 219 NNIKRLLKVPFWPDGYNFIKYRRYFIKDGICYIPENELENLFISRFKRSLINTINLLKNN 278
Query: 226 KWTSTIREQERDRLTPIVEALSMSYLGPDYSQTKEFGEISI-------KDLDQLARSSFP 278
++ R++ + + SYLG DY+ ++ +++I ++++L+ SFP
Sbjct: 279 EYILNKYIYSDLRISGFLRNIGNSYLGSDYNYNEDINDLNIIGNKLDISNINKLSIISFP 338
Query: 279 LCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYA 338
LCMR LF+ L++DHHLKH GR+QL LFLKG G+ +++ + W++ + + FDKE
Sbjct: 339 LCMRRLFEYLKQDHHLKHWGRLQLWLFLKGCGMNLDEQIKLWRSLW---IDHTSFDKEIK 395
Query: 339 YSIRHNYGKEGKRTDYTPYSCQKIISSTP--GVGDHHGCPYRHFSEENLRAAL----GRM 392
Y+IRH YG+EGKR++Y PY C KII+ P G G +HGCP++ F L+ L G +
Sbjct: 396 YNIRHAYGQEGKRSNYLPYPCNKIINGLPLPGNGQNHGCPFKTFDITVLKKLLQNYYGNL 455
Query: 393 GVGSRAMEDVVDKVRNRHYQLACTLTFEAVHSSSCDAGI-NHPNQYFSDSHKILQPKN 449
+ S ++++ + + HYQLAC F+ +H S GI NHPN YF S KN
Sbjct: 456 -IDSNQIQNITNLSKIGHYQLACLDLFKILHPDSNAQGIGNHPNSYFKQSMIYWNKKN 512
>gi|380023649|ref|XP_003695628.1| PREDICTED: LOW QUALITY PROTEIN: DNA primase large subunit-like
[Apis florea]
Length = 351
Score = 213 bits (543), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 128/411 (31%), Positives = 206/411 (50%), Gaps = 67/411 (16%)
Query: 23 LYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEEMENLVRDLWKANMRHPEAS 82
+Y P ++LE+ + +DRL+VL+ + + +++ + L+R
Sbjct: 1 MYIIPPSGYIKLEELYQWCIDRLKVLE-LVNKISKQYYEVSKKQLLRK------------ 47
Query: 83 EDVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKRALMEEFDLPCKA 142
D ISHF+LR + R+WF E L+++R
Sbjct: 48 ----NDSISHFILRSAFSLEHKKRQWFFKQEVKLFKWRL--------------------- 82
Query: 143 ISRTEFENAKE-KLEQVARSFDQPLPTADAIFYKVPFEEVPELVAGRRVYIHKGHAYVAM 201
F N K+ KL + F V LVA R+V++ G AYV
Sbjct: 83 ----SFLNKKDIKL--------------------LYFTNVTNLVAKRQVFLKNGIAYVPE 118
Query: 202 HQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEALSMSYLGPDYSQTKEF 261
+V ++ ++F+ L++ + R S I ER +T I L +Y+ Y + +
Sbjct: 119 TKVYWIIFSEFKKRLNEGFAYS-RTTVSNIYGDER--ITKIFNILQ-NYINKPYLEHNRY 174
Query: 262 GEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWK 321
ISI +LD+L++ SFPLCMR L + L+++HHL +GGR+Q GLFLKG+GL++ DA+ FWK
Sbjct: 175 KYISIDELDELSQKSFPLCMRLLHEALKKNHHLTNGGRVQYGLFLKGIGLKLHDAIQFWK 234
Query: 322 AEFSQKVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQKIISSTPGVGDHHGCPYRHFS 381
EF++K+ F+K+Y Y IR YG+EGKR DY P+ C KI +S G+ D+HGCP++ +
Sbjct: 235 DEFTKKIDERTFEKQYKYGIRFLYGQEGKRADYEPFHCFKIFNSNVGLRDNHGCPFKCMT 294
Query: 382 EENLRAALGRMGVGSRAMEDVVDKVRNRHYQLACTLTFEAVHSSSCDAGIN 432
+ L+ L G+ +E ++ V+ + Y AC +E +H+ D N
Sbjct: 295 FDLLKQTLSNYGLIHLDIESIIQHVKKKSYLEACKTYYEIIHNCIIDNTFN 345
>gi|330804988|ref|XP_003290470.1| hypothetical protein DICPUDRAFT_81203 [Dictyostelium purpureum]
gi|325079398|gb|EGC33000.1| hypothetical protein DICPUDRAFT_81203 [Dictyostelium purpureum]
Length = 459
Score = 212 bits (539), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 143/449 (31%), Positives = 230/449 (51%), Gaps = 29/449 (6%)
Query: 12 NTPNDSVSTLPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEEMENLVRDL 71
+T ND+ + PLY P + E F +DR +L I +L + + D
Sbjct: 12 STSNDAYT--PLYTNVPAFNCNMSQIENFCIDRFNLLNEIL-SLKDTSLKQATTSDQHDF 68
Query: 72 WKANMRHPEASED---VNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEA 128
++ + ++ + ++ KD +SH+ LR+ C +ED R WF++ E AL ++R ++
Sbjct: 69 YELSKKYLGSQKEEIFKIKDELSHYCLRIAMCDSED-RDWFITSELALLKHRL---PNDL 124
Query: 129 KRALMEEFDLPCKAISRTEFENAKEKLEQVARSFDQPL--PTADAIFYKVPFEEVPELVA 186
+ D +S E++ + L+ + + L P FYK+PF+++P L+
Sbjct: 125 THFITTYSDFGWYPVSEDEYKLLADDLDYLVVKSNLKLQDPIGPTHFYKIPFQDIPNLID 184
Query: 187 GRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKAL----ILTNRKWTSTIREQERDRLTPI 242
++V I KG+A+V L+ +++ L A+ I NR IRE+ + +
Sbjct: 185 LKKVIIKKGYAFVFRSNFKDLIANTYKNYLEFAMDRVKIDKNR-----IREEFPELIQFF 239
Query: 243 VEALSMSYLGPDYSQTKEFGEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQL 302
LG + Q + +I +D+ L++SSFPLCMR + D L + LKH GR+Q
Sbjct: 240 KTLPRAGELGLN-KQFLKSTQIRKEDVLPLSKSSFPLCMRVMHDSLIGNAKLKHEGRLQF 298
Query: 303 GLFLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQKI 362
+LKG+GL E+A+ FWK FS++V FDKEYAY++RH YG EGK Y PYSC KI
Sbjct: 299 STYLKGIGLPFEEAIQFWKMAFSRRVSNNEFDKEYAYTLRHTYGLEGKAVSYHPYSCSKI 358
Query: 363 ISSTP-GVGDHHGCPYRHFSEENLRAALGRMGVGSRAMEDVVDKVRNRHYQLACTLTFEA 421
I+ P G+ HGCPY + E L L +G+ +++ + + +ACT F
Sbjct: 359 IAKIPSGIDQVHGCPYL-WDTEKLANKLEEIGISEFERIQLIESSKVQP-NIACTKHFNI 416
Query: 422 VH-SSSCDAGINHPNQYFSDS---HKILQ 446
+H S++ I+HPNQ+F S HK L+
Sbjct: 417 LHPSNNFSKVISHPNQFFEASRLYHKKLE 445
>gi|429854969|gb|ELA29949.1| DNA primase large subunit [Colletotrichum gloeosporioides Nara gc5]
Length = 481
Score = 211 bits (536), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 154/471 (32%), Positives = 231/471 (49%), Gaps = 91/471 (19%)
Query: 21 LPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEEMENLVRDLW------KA 74
L Y AP ++ LE FE +A+DRLR+L + R K P+E+ N ++ L ++
Sbjct: 38 LNFYADAPTADITLEQFEQWAIDRLRILAELEACAFRNKSPQEVANHMKPLLDKYLPLES 97
Query: 75 NMRH-PEASEDVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKRALM 133
NM H P+ KD SHF+LRL + RTEDLR+ F+ +ET L+R R + A +
Sbjct: 98 NMSHSPKLFSQRQKDHYSHFILRLAFSRTEDLRRRFVRVETMLFRLRLNSDDLRERTAFV 157
Query: 134 EEFDLPC-KAISRTEFENAKEKLEQVARSFDQPLPTADAIFYKVPFEEVPELVAGRRVYI 192
+ L + ++ E ++L+ ++R+ D ++KV ++ VPELV R+V++
Sbjct: 158 KSLSLDWWETVTEEEKTMYAQELKSMSRTRGAN-AMEDDDWFKVDWDRVPELVEQRKVFL 216
Query: 193 HKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEALSMSYLG 252
KG A+V + S+VV +F S L + L LT R + R E DRLTPI++ LS +++
Sbjct: 217 KKGKAFVPGREQASMVVGEFVSRLERQLELTAR---ALPRLDEDDRLTPILDHLSKNFIT 273
Query: 253 PDYSQTKEFG-----EISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLK 307
PD S + G EI+ +++D LA+ FP CM HL LR D HLKH GR+Q LFLK
Sbjct: 274 PDSSYSSNTGAPVGAEITARNIDNLAQH-FPACMSHLHRSLRRDAHLKHYGRLQYTLFLK 332
Query: 308 GVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQKIISSTP 367
G+GL +E+ L FW+ F + + + F+KEY Y++RH YG
Sbjct: 333 GIGLNLEECLVFWRQGF-RNITDDTFNKEYRYNVRHVYG--------------------- 370
Query: 368 GVGDHHGCPYRHFSEENLRAALGRMGVGSRA-MEDVVDKVRNRHYQLAC-----TLT--- 418
+NL + MGV RA + V + N+ + +AC TL+
Sbjct: 371 ---------------DNLTTLVQAMGVSDRATLNGVKEDKENQKFHMACNRYVSTLSQPY 415
Query: 419 --------------FEAVHSSSC----DAG---------INHPNQYFSDSH 442
FE +H D G I HPN+YF S+
Sbjct: 416 GWSAAPFTLHTPSVFEHLHKQELKKAKDEGVFTSAQLETIVHPNEYFKRSY 466
>gi|426353631|ref|XP_004044292.1| PREDICTED: DNA primase large subunit-like, partial [Gorilla gorilla
gorilla]
Length = 486
Score = 211 bits (536), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 125/316 (39%), Positives = 185/316 (58%), Gaps = 22/316 (6%)
Query: 21 LPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISD-ALARGKRPEEMEN-LVRDLWKANMRH 78
L Y P + L +FE A+DR+++LK + + ++ K E+ ++ L +L K +
Sbjct: 26 LQFYLQPPSENISLIEFENLAIDRVKLLKSVENLGVSYVKGTEQYQSKLESELRKLKFSY 85
Query: 79 PEASEDV----NKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKRALME 134
E ED +D ISHF+LRL YC++E+LR+WF+ E L R+RF + + + ++
Sbjct: 86 RENLEDEYEPRRRDHISHFILRLAYCQSEELRRWFIQQEMDLLRFRFSILPKDKIQDFLK 145
Query: 135 EFDLPCKAISRTEFENAKEKLEQVARSFDQPLPTADAI------FYKVPFEEVPELVAGR 188
+ L +AIS E + +E+ E VA S P+ + YK+PF + +L GR
Sbjct: 146 DSQLQFEAISDEE-KTLREQ-EIVASS-----PSLSGLKLGFESIYKIPFADALDLFRGR 198
Query: 189 RVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEALSM 248
+VY+ G AYV + +V++++ +FR+ LSKAL LT R + Q +RL P++ LS
Sbjct: 199 KVYLEDGFAYVPLKDIVAIILNEFRAKLSKALALTARSLPAV---QSDERLQPLLNHLSH 255
Query: 249 SYLGPDYSQTKEFGEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKG 308
SY G DYS G+IS+ +D L+ SFP CMR L LRE+HHL+HGGRMQ LFLKG
Sbjct: 256 SYTGHDYSTQGNVGKISLNQIDLLSTKSFPPCMRQLHKALRENHHLRHGGRMQYDLFLKG 315
Query: 309 VGLRMEDALAFWKAEF 324
+GL +E AL FWK EF
Sbjct: 316 IGLTLEQALQFWKQEF 331
>gi|328877299|pdb|3Q36|A Chain A, Crystal Structure Of The 4fe-4s Cluster Domain Of Human
Dna Primase Large Subunit
gi|328877300|pdb|3Q36|B Chain B, Crystal Structure Of The 4fe-4s Cluster Domain Of Human
Dna Primase Large Subunit
Length = 192
Score = 209 bits (532), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 98/187 (52%), Positives = 131/187 (70%), Gaps = 3/187 (1%)
Query: 262 GEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWK 321
G+IS+ +D L+ SFP CMR L LRE+HHL+HGGRMQ GLFLKG+GL +E AL FWK
Sbjct: 4 GKISLDQIDLLSTKSFPPCMRQLHKALRENHHLRHGGRMQYGLFLKGIGLTLEQALQFWK 63
Query: 322 AEFSQ-KVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQKII-SSTPGVGDHHGCPYRH 379
EF + K+ ++FDK Y+Y+IRH++GKEGKRTDYTP+SC KII S+ P GD+HGCP+RH
Sbjct: 64 QEFIKGKMDPDKFDKGYSYNIRHSFGKEGKRTDYTPFSCLKIILSNPPSQGDYHGCPFRH 123
Query: 380 FSEENLRAALGRMGVGSRAMEDVVDKVRNRHYQLACTLTFEAVHS-SSCDAGINHPNQYF 438
E L+ L + + ++D V+ HYQ+AC FE +H+ C +NHPNQ+F
Sbjct: 124 SDPELLKQKLQSYKISPGGISQILDLVKGTHYQVACQKYFEMIHNVDDCGFSLNHPNQFF 183
Query: 439 SDSHKIL 445
+S +IL
Sbjct: 184 CESQRIL 190
>gi|221504656|gb|EEE30329.1| DNA primase, large subunit, putative [Toxoplasma gondii VEG]
Length = 584
Score = 209 bits (532), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 138/405 (34%), Positives = 210/405 (51%), Gaps = 52/405 (12%)
Query: 79 PEASEDVN-KDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRF--LL-------GSSEA 128
PE ++ V +D ISHF LRL + ++ ++WF+ E L+ YR L+ G+
Sbjct: 163 PELTQAVAMRDAISHFALRLAFSTDKERQQWFVRQEARLFLYRLEELMKFRGDSPGTGFE 222
Query: 129 KRALMEEF-----------------DLPCKAISR--TEFENAKEKLEQVARSFDQPLPTA 169
+ +EF D P A+ + TEF A A S+ +
Sbjct: 223 RDQPFDEFLRREGLDYDFVTRPQRPDSPAMALWQRATEFRGADAS---AAYSYQE----- 274
Query: 170 DAIFYKVPF-EEVPELVAGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKAL-ILTNRKW 227
+ VPF + LVA RRVYIH+ AYV + +++ +F+S LS+ +L +R+
Sbjct: 275 -LRLFLVPFYPDAASLVARRRVYIHRFIAYVPFTDMDQVLLGKFKSVLSECFSLLDSRQS 333
Query: 228 TSTIREQERDRLTPIVEALSMSYLGPDYSQTK-EFGE--ISIKDLDQLARSSFPLCMRHL 284
T R+ ++ A+ Y+G D+ + E E ++ +++ + RSSFP CMR L
Sbjct: 334 TLQTNVFGDARIGELLMAIPTVYIGKDFRKDAVETAEDRLTPQNVKDVWRSSFPPCMRRL 393
Query: 285 FDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHN 344
F DHH++H GR+QL LF KG G+++E+ L F +A + A++FD+E++Y++RH
Sbjct: 394 FGAYMRDHHMRHSGRLQLWLFFKGAGMKLEENLQFNRALWQD---AQKFDREHSYTLRHI 450
Query: 345 YGKEGKRTDYTPYSCQKIISS-----TPGVGDHHGCPYRHFSEENLRAALGRMGVGSRAM 399
YG+EGKR DY P SC KIIS TPGVGD HGCP++HF + L+ L G+ +
Sbjct: 451 YGQEGKRADYPPLSCSKIISGGGMLQTPGVGDFHGCPFKHFDKPQLQKLLTEFGLSFNQL 510
Query: 400 EDVVDKVRNRHYQLACTLTFEAVHSSSCDAGI-NHPNQYFSDSHK 443
V+ YQLAC F H S G+ NHPN ++ S +
Sbjct: 511 LPVLKYKDTNEYQLACREFFMQTHPGSEGEGVGNHPNHFYEASRR 555
>gi|237843813|ref|XP_002371204.1| DNA primase, large subunit, putative [Toxoplasma gondii ME49]
gi|211968868|gb|EEB04064.1| DNA primase, large subunit, putative [Toxoplasma gondii ME49]
Length = 584
Score = 209 bits (532), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 138/405 (34%), Positives = 210/405 (51%), Gaps = 52/405 (12%)
Query: 79 PEASEDVN-KDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRF--LL-------GSSEA 128
PE ++ V +D ISHF LRL + ++ ++WF+ E L+ YR L+ G+
Sbjct: 163 PELTQAVAMRDAISHFALRLAFSTDKERQQWFVRQEARLFLYRLEELMKFRGDSPGTGFE 222
Query: 129 KRALMEEF-----------------DLPCKAISR--TEFENAKEKLEQVARSFDQPLPTA 169
+ +EF D P A+ + TEF A A S+ +
Sbjct: 223 RDQPFDEFLRREGLDYDFVTRPQRPDSPAMALWQRATEFRGADAS---AAYSYQE----- 274
Query: 170 DAIFYKVPF-EEVPELVAGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKAL-ILTNRKW 227
+ VPF + LVA RRVYIH+ AYV + +++ +F+S LS+ +L +R+
Sbjct: 275 -LRLFLVPFYPDAASLVARRRVYIHRFIAYVPFTDMDQVLLGKFKSVLSECFSLLDSRQS 333
Query: 228 TSTIREQERDRLTPIVEALSMSYLGPDYSQTK-EFGE--ISIKDLDQLARSSFPLCMRHL 284
T R+ ++ A+ Y+G D+ + E E ++ +++ + RSSFP CMR L
Sbjct: 334 TLQTNVFGDARIGELLMAIPTVYIGKDFRKDAVETAEDRLTPQNVKDVWRSSFPPCMRRL 393
Query: 285 FDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHN 344
F DHH++H GR+QL LF KG G+++E+ L F +A + A++FD+E++Y++RH
Sbjct: 394 FGAYMRDHHMRHSGRLQLWLFFKGAGMKLEENLQFNRALWQD---AQKFDREHSYTLRHI 450
Query: 345 YGKEGKRTDYTPYSCQKIISS-----TPGVGDHHGCPYRHFSEENLRAALGRMGVGSRAM 399
YG+EGKR DY P SC KIIS TPGVGD HGCP++HF + L+ L G+ +
Sbjct: 451 YGQEGKRADYPPLSCSKIISGGGMLQTPGVGDFHGCPFKHFDKPQLQKLLTEFGLSFNQL 510
Query: 400 EDVVDKVRNRHYQLACTLTFEAVHSSSCDAGI-NHPNQYFSDSHK 443
V+ YQLAC F H S G+ NHPN ++ S +
Sbjct: 511 LPVLKYKDTNEYQLACREFFMQTHPGSEGEGVGNHPNHFYEASRR 555
>gi|221481574|gb|EEE19956.1| DNA primase, large subunit, putative [Toxoplasma gondii GT1]
Length = 584
Score = 207 bits (528), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 135/396 (34%), Positives = 205/396 (51%), Gaps = 51/396 (12%)
Query: 87 KDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRF--LL-------GSSEAKRALMEEF- 136
+D ISHF LRL + ++ ++WF+ E L+ YR L+ G+ + +EF
Sbjct: 172 RDAISHFALRLAFSTDKERQQWFVRQEARLFLYRLEELMKFRGDSPGTGFERDQPFDEFL 231
Query: 137 ----------------DLPCKAISR--TEFENAKEKLEQVARSFDQPLPTADAIFYKVPF 178
D P A+ + TEF A A S+ + + VPF
Sbjct: 232 RREGLDYDFVTRPQRPDSPAMALWQRATEFRGADAS---AAYSYQE------LRLFLVPF 282
Query: 179 -EEVPELVAGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKAL-ILTNRKWTSTIREQER 236
+ LVA RRVYIH+ AYV + +++ +F+S LS+ +L +R+ T
Sbjct: 283 YPDAASLVARRRVYIHRFIAYVPFTDMDQVLLGKFKSVLSECFSLLDSRQSTLQTNVFGD 342
Query: 237 DRLTPIVEALSMSYLGPDYSQTK-EFGE--ISIKDLDQLARSSFPLCMRHLFDKLREDHH 293
R+ ++ A+ Y+G D+ + E E ++ +++ + RSSFP CMR LF DHH
Sbjct: 343 ARIGELLMAIPTVYIGKDFRKDAVETAEDRLTPQNVKDVWRSSFPPCMRRLFGAYMRDHH 402
Query: 294 LKHGGRMQLGLFLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTD 353
++H GR+QL LF KG G+++E+ L F +A + A++FD+E++Y++RH YG+EGKR D
Sbjct: 403 MRHSGRLQLWLFFKGAGMKLEENLQFNRALWQD---AQKFDREHSYTLRHIYGQEGKRAD 459
Query: 354 YTPYSCQKIISS-----TPGVGDHHGCPYRHFSEENLRAALGRMGVGSRAMEDVVDKVRN 408
Y P SC KIIS TPGVGD HGCP++HF + L+ L G+ + V+
Sbjct: 460 YPPLSCSKIISGGGMLQTPGVGDFHGCPFKHFDKPQLQKLLTEFGLSFNQLLPVLKYKDT 519
Query: 409 RHYQLACTLTFEAVHSSSCDAGI-NHPNQYFSDSHK 443
YQLAC F H S G+ NHPN ++ S +
Sbjct: 520 NEYQLACREFFMQTHPGSEGEGVGNHPNHFYEASRR 555
>gi|169594738|ref|XP_001790793.1| hypothetical protein SNOG_00097 [Phaeosphaeria nodorum SN15]
gi|160700927|gb|EAT91592.2| hypothetical protein SNOG_00097 [Phaeosphaeria nodorum SN15]
Length = 444
Score = 207 bits (527), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 126/307 (41%), Positives = 168/307 (54%), Gaps = 31/307 (10%)
Query: 173 FYKVPFEEVPELVAGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIR 232
++KV +E VPELV RRV + +G AYV + +SLVV +F L AL LT R + R
Sbjct: 130 WFKVDWERVPELVEQRRVLLKRGKAYVPQREQMSLVVAEFTKKLDDALELTAR---ALPR 186
Query: 233 EQERDRLTPIVEALSMSYLGPD--YSQTKE----FGEISIKDLDQLARSSFPLCMRHLFD 286
E DRL PI+ LS S+ PD YS + I +D L+++ FPLCMR+L
Sbjct: 187 LDEDDRLAPILAHLSQSFTAPDAAYSSSDANIDGLSAIRASSIDTLSQN-FPLCMRNLHT 245
Query: 287 KLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYG 346
LRE+ HLKH GR+Q LFLKG+GL +E+ L FW+ F + + ++F KEY Y+IRH+YG
Sbjct: 246 TLRENSHLKHFGRLQYTLFLKGIGLSLEECLVFWRRSF-KLIDDDKFQKEYKYNIRHSYG 304
Query: 347 KEGKRTD-----YTPYSCQKIISS-TPGVGDHHGCPYRHFSEENLRAALGRMGVGSR-AM 399
G + YTPYSCQK+++ PG G HGCPYR + +NL L R+GV R +
Sbjct: 305 DVGGDANRRGRGYTPYSCQKLLTEPQPGPGQTHGCPYRTYKPDNLIPLLQRIGVNDRDVL 364
Query: 400 EDVVDKVRNRHYQLACTLTFEAVHSSSC----DAG---------INHPNQYFSDSHKILQ 446
+ V + V + Y +AC FE H D G I HPN YF S +
Sbjct: 365 KTVKEDVTKQRYHVACNRVFEWSHKREIKKVKDDGSWSATDLDTIVHPNTYFKRSWLLKH 424
Query: 447 PKNNNAA 453
NA
Sbjct: 425 LGEGNAG 431
>gi|82752662|ref|XP_727386.1| DNA primase large subunit [Plasmodium yoelii yoelii 17XNL]
gi|23483206|gb|EAA18951.1| DNA primase large subunit [Plasmodium yoelii yoelii]
Length = 532
Score = 207 bits (527), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 132/414 (31%), Positives = 215/414 (51%), Gaps = 57/414 (13%)
Query: 62 EEMENLVRDLWKANMRHPEASEDVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRF 121
EEMEN++ D++SH++LR+ + + ++ +KWFL E L+ +R
Sbjct: 144 EEMENIIM-----------------TDLLSHYILRIAFSKDKEKQKWFLKQELKLFTFRL 186
Query: 122 L------------LGSSEAKRALME-------EFDLPCKA----ISRTEFENAKEKLEQV 158
LG SE R L+ +D K IS +++
Sbjct: 187 NELKNINVLNQDNLGESE--RGLIYLLKRENLNYDFISKPSASYISSATTDSSNNDKWNK 244
Query: 159 ARSFDQPLPTADAIFYKVPFEEVPE---LVAGRRVYIHKGHAYVAMHQVVSLVVTQFRSN 215
SF Q T + +F KVPF P+ LV +V + KG AYV + ++++TQF+ N
Sbjct: 245 YTSFIQNRDTIEKLF-KVPF--FPDAYFLVKDHKVCVEKGIAYVPDIYLDAILITQFKIN 301
Query: 216 LSKALILTNRKWTSTIREQERDRLTPIVEALSMSYLGPDYSQTKEFGE---ISIKDLDQL 272
+ ++ + + Q R++ + AL +Y+ D+ Q E E + ++L +
Sbjct: 302 IQESFKYLEQNEKLLLDVQNDSRISSFLAALPKAYVAKDFRQNYEHTEDTRLMPQNLYNI 361
Query: 273 ARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWKAEFSQKVGAER 332
+ SFP CMR +F +D HLKH GR QL LFLKG G+ +++ + ++ + Q ++
Sbjct: 362 YKQSFPPCMRRIFVNYIKDKHLKHWGRQQLWLFLKGAGMTLDENIQTNRSIWMQ---PDK 418
Query: 333 FDKEYAYSIRHNYGKEGKRTDYTPYSCQKIISS--TPGVGDHHGCPYRHFSEENLRAALG 390
FDKE+ Y+IR+ YGKEGK+TD+TPY+C KII++ P GD HGCP+++F E +L++ L
Sbjct: 419 FDKEHRYTIRYMYGKEGKKTDFTPYNCSKIINNFPIPSSGDTHGCPFKNFDEPHLKSLLF 478
Query: 391 RMGVGSRAMEDVVDKVRNRHYQLACTLTFEAVHSSSCDAGI-NHPNQYFSDSHK 443
G+ ++ ++ +N YQLAC F H +S G+ NHPN ++ +S K
Sbjct: 479 FFGLNDDQIKAIMPFKKNNEYQLACVKFFTETHPNSPGDGVGNHPNSFYVESRK 532
>gi|68072739|ref|XP_678283.1| DNA primase, large subunit [Plasmodium berghei strain ANKA]
gi|56498699|emb|CAH96187.1| DNA primase, large subunit, putative [Plasmodium berghei]
Length = 525
Score = 207 bits (526), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 130/408 (31%), Positives = 214/408 (52%), Gaps = 52/408 (12%)
Query: 62 EEMENLVRDLWKANMRHPEASEDVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRF 121
EEMEN++ D++SH++LR+ + R ++ +KWFL E L+ +R
Sbjct: 144 EEMENIIM-----------------ADLLSHYILRIAFSRDKEKQKWFLKQELKLFTFRL 186
Query: 122 ------------LLGSSEAKRALM-----EEFDLPCKAISRTEFENAKEKLEQVARSFDQ 164
LG SE R L+ E + + + +K + +F Q
Sbjct: 187 NELKNINVLNQDNLGESE--RGLIYLLKRENLNYDFIPKPSAAYISNNDKWNKYT-AFIQ 243
Query: 165 PLPTADAIFYKVPFEEVPE---LVAGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALI 221
T + +F KVPF P+ LV +V + KG AYV + ++++TQF+ N+ ++
Sbjct: 244 NRDTIEKLF-KVPF--FPDAYFLVKDHKVCVEKGVAYVPDIYLDAILITQFKINIQESFK 300
Query: 222 LTNRKWTSTIREQERDRLTPIVEALSMSYLGPDYSQTKEFGE---ISIKDLDQLARSSFP 278
+ + Q R++ + AL +Y+ D+ Q E E + ++L + + SFP
Sbjct: 301 YLEQNEKLLLDAQNDSRISAFLTALPKAYVAKDFRQNYEHTEDTRLMPQNLYNIYKQSFP 360
Query: 279 LCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYA 338
CMR +F +D HLKH GR QL LFLKG G+ +++ + ++ + Q ++FDKE+
Sbjct: 361 PCMRRIFVNYIKDKHLKHWGRQQLWLFLKGAGMTLDENIQTNRSIWMQ---PDKFDKEHR 417
Query: 339 YSIRHNYGKEGKRTDYTPYSCQKIISS--TPGVGDHHGCPYRHFSEENLRAALGRMGVGS 396
Y+IR+ YGKEGK+TD+TPY+C KII++ P GD HGCP+++F E +L++ L G+
Sbjct: 418 YTIRYMYGKEGKKTDFTPYNCSKIINNFPIPSSGDTHGCPFKNFDEHHLKSLLFFFGLND 477
Query: 397 RAMEDVVDKVRNRHYQLACTLTFEAVHSSSCDAGI-NHPNQYFSDSHK 443
++ ++ +N YQLAC F H +S G+ NHPN ++ +S K
Sbjct: 478 DQIKAIMPFKKNNEYQLACVKFFTETHPNSPGDGVGNHPNSFYVESRK 525
>gi|296005191|ref|XP_002808927.1| DNA primase large subunit, putative [Plasmodium falciparum 3D7]
gi|225631813|emb|CAX64208.1| DNA primase large subunit, putative [Plasmodium falciparum 3D7]
Length = 539
Score = 206 bits (525), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 125/411 (30%), Positives = 222/411 (54%), Gaps = 48/411 (11%)
Query: 62 EEMENLVRDLWKANMRHPEASEDVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRF 121
EEMEN++ D++SH++LR+ + + ++ ++WFL E L+ +R
Sbjct: 144 EEMENIIM-----------------TDLLSHYILRIAFSKDKEKQQWFLKQELKLFTFRL 186
Query: 122 -------LLGS---SEAKRAL---MEEFDLPCKAISR--TEFENAKEKLEQVARSFDQPL 166
+L S SE++R L ++ ++ ++I++ + N ++ E+ + + +
Sbjct: 187 NELKNINVLNSQNISESERGLVHLLKRENIHYESITKPSISYGNKNDEWEK----YTEFI 242
Query: 167 PTADAI--FYKVPF-EEVPELVAGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILT 223
P D I +KVPF + LV +V + KG AYV + ++ QF+ N+ ++
Sbjct: 243 PNKDTIQKLFKVPFYPDAYFLVRDHKVVVEKGVAYVPDIYLDIILTVQFKLNIKESFKYL 302
Query: 224 NRKWTSTIREQERDRLTPIVEALSMSYLGPDYSQTKEFGE---ISIKDLDQLARSSFPLC 280
+ ++ Q R++ + +L +Y+ D+ Q E + +S ++L + + SFP C
Sbjct: 303 DHNEKMLLKIQNDPRISTFLSSLPKAYVAKDFRQNYEHTQDTRLSPQNLYSVYKQSFPPC 362
Query: 281 MRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYS 340
MR +F +D HLKH GR QL LFLKG G+ +++ + ++ + Q ++FDKE+ Y+
Sbjct: 363 MRRIFVNYIKDKHLKHWGRQQLWLFLKGAGMTLDENIQTNRSIWLQ---PDKFDKEHRYN 419
Query: 341 IRHNYGKEGKRTDYTPYSCQKIISS--TPGVGDHHGCPYRHFSEENLRAALGRMGVGSRA 398
IR+ YGKEGK+TD++PY+C KII++ P D HGCP+++F E +L++ L G+
Sbjct: 420 IRYMYGKEGKKTDFSPYNCSKIINNFPVPSSNDIHGCPFKNFDESHLKSLLYFFGLSDEQ 479
Query: 399 MEDVVDKVRNRHYQLACTLTFEAVHSSSCDAGI-NHPNQYFSDSHKILQPK 448
++ ++ RN YQ+AC F H S G+ NHPN Y+ +S K + K
Sbjct: 480 IKSIMPLKRNNEYQMACVKFFMETHPGSVGDGVGNHPNSYYVESRKYYKSK 530
>gi|341879249|gb|EGT35184.1| hypothetical protein CAEBREN_28144 [Caenorhabditis brenneri]
Length = 389
Score = 206 bits (525), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 124/366 (33%), Positives = 192/366 (52%), Gaps = 13/366 (3%)
Query: 87 KDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKRALMEEFDLPCKAISRT 146
+D I HF+LRL +CRT + +KW ++E L R+R + + + ++
Sbjct: 4 RDNIGHFILRLAFCRTSENQKWLTNIEADLLRFRLRQERETVVDSSLSTVNFDIYRLTDA 63
Query: 147 EFENAKEKLEQVARSFDQPLPTADAIFYKVPFEEVPELVAGRRVYIHKGHAYVAMHQVVS 206
E + + L + + + FY+V F + ELV V++ KG AY +V
Sbjct: 64 EKMDMERDLSAACQVRQMDMRQKN--FYRVDFLDAIELVRRGSVHLKKGFAYFPFEDLVQ 121
Query: 207 LVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEALSM-SYLGPDYSQTKEFGEIS 265
++VT+ R+++ A+ R + +E RL P + LS +Y G DY+ + G I
Sbjct: 122 ILVTKMRNSMMAAMA---RAFKHLAILEEEGRLLPRLALLSNNAYSGKDYNGEQPDGSII 178
Query: 266 IKD--LDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWKAE 323
I LD+++ SFP CM+ + LR +HHLK+G R Q GLFLKG+GL +++A+A + E
Sbjct: 179 ITRHMLDKISIRSFPPCMKRMHSHLRLNHHLKYGARRQYGLFLKGIGLSLDEAMAMMREE 238
Query: 324 FSQKVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQKII-SSTPGVGDHHGCPYRHFSE 382
F++K+ +++FDKEY Y+IR+ YGKEG+R T SC II + P D HGCP+RH
Sbjct: 239 FTKKITSDKFDKEYGYNIRYMYGKEGRRVAQTAMSCATIILRNPPSAADCHGCPFRHSEI 298
Query: 383 ENLRAALGRMGVGSRA-MEDVVDKVRNRHYQLACTLTFEAVHS---SSCDAGINHPNQYF 438
L+ L V + +E + + Y ACT FE H I HPNQ++
Sbjct: 299 ALLKQRLSSEEVLKKEHVERIAELAEANQYDKACTRYFEFTHKLEEGGLGQLITHPNQFY 358
Query: 439 SDSHKI 444
+S KI
Sbjct: 359 EESQKI 364
>gi|414588041|tpg|DAA38612.1| TPA: cyclin superfamily protein, putative [Zea mays]
Length = 492
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 103/155 (66%), Positives = 120/155 (77%), Gaps = 4/155 (2%)
Query: 1 MEIVRSQRS----RTNTPNDSVSTLPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALA 56
MEIVRSQR + LP Y+ APQLEVRLE+FE+FA+DRLRVLKGISD L+
Sbjct: 1 MEIVRSQRQVAAAASGGGGGGAGALPTYKAAPQLEVRLEEFELFAIDRLRVLKGISDGLS 60
Query: 57 RGKRPEEMENLVRDLWKANMRHPEASEDVNKDIISHFVLRLVYCRTEDLRKWFLSMETAL 116
RGKRPEEME LV +LWK +MRH + +E++NKDIISHFVLRLVYCRTE+LRKWFLSMET L
Sbjct: 61 RGKRPEEMEKLVSELWKTHMRHQDPAENLNKDIISHFVLRLVYCRTEELRKWFLSMETTL 120
Query: 117 YRYRFLLGSSEAKRALMEEFDLPCKAISRTEFENA 151
+RYRF L S E +R LM EF LP KA+ +EFE A
Sbjct: 121 FRYRFRLESPETQRMLMTEFQLPYKALPYSEFEAA 155
>gi|401398161|ref|XP_003880235.1| putative DNA primase, large subunit [Neospora caninum Liverpool]
gi|325114644|emb|CBZ50200.1| putative DNA primase, large subunit [Neospora caninum Liverpool]
Length = 582
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 136/408 (33%), Positives = 209/408 (51%), Gaps = 34/408 (8%)
Query: 67 LVRDLWKANMRHPEASEDVN-KDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRF--LL 123
L R + A P+ + V +D ISHF LRL + ++ ++WF+ E L+ YR L+
Sbjct: 147 LGRPVGGAPAPSPDLRQAVAMRDAISHFALRLAFSTDKERQQWFVRQEARLFLYRLDELM 206
Query: 124 GSSEAKRALMEEFDLPCKAISRTE-----FENAKEKLEQVARSFDQPLP------TADAI 172
+ E D P R E F ++ + A + Q T A
Sbjct: 207 KYRGDSTSTGFERDQPFNEFLRREGLDYDFVTRPQRSDSPAMNLWQRATEFRGGDTTGAY 266
Query: 173 FYK------VPF-EEVPELVAGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNR 225
Y+ VPF + LVA RRVY+H+ AYV + +++++F++ LS+ L
Sbjct: 267 SYQELRLFLVPFYPDAASLVARRRVYVHRFIAYVPFTDMDQVLLSKFKTVLSECFTLLES 326
Query: 226 KWTSTIREQERD-RLTPIVEALSMSYLGPDYSQ-TKEFGE--ISIKDLDQLARSSFPLCM 281
+ T+ D R+ ++ A+ Y+G D+ + T E E ++ ++ + R+SFP CM
Sbjct: 327 RQTTLQTNVFGDPRIGELLMAIPTVYIGKDFRKDTVETAEDRLTPQNAKDVWRTSFPPCM 386
Query: 282 RHLFDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSI 341
R LF DHH++H GR+QL LF KG G+++++ L F +A + A++FD+E++Y++
Sbjct: 387 RRLFGAYMRDHHMRHSGRLQLWLFFKGAGMKLDENLQFNRALWQD---AQKFDREHSYTL 443
Query: 342 RHNYGKEGKRTDYTPYSCQKIISS-----TPGVGDHHGCPYRHFSEENLRAALGRMGVGS 396
RH YG+EGKR DY P SC KIIS TPGVGD HGCP++HF L+ L G+
Sbjct: 444 RHIYGQEGKRADYPPLSCSKIISGGGMLQTPGVGDFHGCPFKHFDRPQLQKLLSEFGLSF 503
Query: 397 RAMEDVVDKVRNRHYQLACTLTFEAVHSSSCDAGI-NHPNQYFSDSHK 443
+ V+ YQLAC F H S G+ NHPN ++ S +
Sbjct: 504 NQLLPVLKYKDTNEYQLACREFFMQTHPGSEGEGVGNHPNHFYEASRR 551
>gi|70948942|ref|XP_743927.1| DNA primase, large subunit [Plasmodium chabaudi chabaudi]
gi|56523658|emb|CAH78345.1| DNA primase, large subunit, putative [Plasmodium chabaudi chabaudi]
Length = 424
Score = 206 bits (523), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 128/400 (32%), Positives = 213/400 (53%), Gaps = 38/400 (9%)
Query: 75 NMRHPEASEDVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFL------------ 122
N E + D++SH++LR+ + + ++ +KWFL E L+ +R
Sbjct: 32 NYSKEEMENIIMTDLLSHYILRIAFSKDKEKQKWFLKQELKLFTFRLNELKNINVLNQDN 91
Query: 123 LGSSE------AKRALMEEFDLPCKAI----SRTEFENAKEKLEQVARSFDQPLPTADAI 172
LG SE KR + +P ++ S T + +K + +F Q T + +
Sbjct: 92 LGESERGLIYLLKRENLNYDYIPKPSVAYIGSATTDSSNTDKWNKYT-AFIQNRETIEKL 150
Query: 173 FYKVPFEEVPE---LVAGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTS 229
F KVPF P+ LV +V + KG AYV + ++++TQF+ N+ ++ +
Sbjct: 151 F-KVPF--FPDAYFLVKDHKVCVEKGIAYVPDTYLDAILITQFKINIQESFKYLEQNEKL 207
Query: 230 TIREQERDRLTPIVEALSMSYLGPDYSQTKEFGE---ISIKDLDQLARSSFPLCMRHLFD 286
+ Q R++ + AL +Y+ D+ Q E E + ++L + + SFP CMR +F
Sbjct: 208 LLDVQNDSRISSFLAALPKAYVAKDFRQNYEHTEDTRLMPQNLYSIYKQSFPPCMRRIFV 267
Query: 287 KLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYG 346
+D HLKH GR QL LFLKG G+ +++ + ++ + Q ++FDKE+ Y+IR+ YG
Sbjct: 268 NYIKDKHLKHWGRQQLWLFLKGAGMTLDENIQTNRSIWMQ---PDKFDKEHRYTIRYMYG 324
Query: 347 KEGKRTDYTPYSCQKIISS--TPGVGDHHGCPYRHFSEENLRAALGRMGVGSRAMEDVVD 404
KEGK+TD+TPY+C KII++ P GD HGCP+++F E +L++ L G+ ++ ++
Sbjct: 325 KEGKKTDFTPYNCSKIINNFPIPSSGDTHGCPFKNFDEPHLKSLLFFFGLNDDQIKAIMP 384
Query: 405 KVRNRHYQLACTLTFEAVHSSSCDAGI-NHPNQYFSDSHK 443
+N YQLAC F H +S G+ NHPN ++ +S K
Sbjct: 385 FKKNNEYQLACVKFFTETHPNSPGDGVGNHPNSFYVESRK 424
>gi|300508454|pdb|3L9Q|A Chain A, Crystal Structure Of Human Polymerase Alpha-Primase P58
Iron-Sulfur Cluster Domain
gi|300508455|pdb|3L9Q|B Chain B, Crystal Structure Of Human Polymerase Alpha-Primase P58
Iron-Sulfur Cluster Domain
Length = 195
Score = 205 bits (521), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 96/184 (52%), Positives = 128/184 (69%), Gaps = 3/184 (1%)
Query: 265 SIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWKAEF 324
S+ +D L+ SFP CMR L LRE+HHL+HGGRMQ GLFLKG+GL +E AL FWK EF
Sbjct: 3 SLDQIDLLSTKSFPPCMRQLHKALRENHHLRHGGRMQYGLFLKGIGLTLEQALQFWKQEF 62
Query: 325 SQ-KVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQKII-SSTPGVGDHHGCPYRHFSE 382
+ K+ ++FDK Y+Y+IRH++GKEGKRTDYTP+SC KII S+ P GD+HGCP+RH
Sbjct: 63 IKGKMDPDKFDKGYSYNIRHSFGKEGKRTDYTPFSCLKIILSNPPSQGDYHGCPFRHSDP 122
Query: 383 ENLRAALGRMGVGSRAMEDVVDKVRNRHYQLACTLTFEAVHS-SSCDAGINHPNQYFSDS 441
E L+ L + + ++D V+ HYQ+AC FE +H+ C +NHPNQ+F +S
Sbjct: 123 ELLKQKLQSYKISPGGISQILDLVKGTHYQVACQKYFEMIHNVDDCGFSLNHPNQFFCES 182
Query: 442 HKIL 445
+IL
Sbjct: 183 QRIL 186
>gi|156097226|ref|XP_001614646.1| DNA primase, large subunit [Plasmodium vivax Sal-1]
gi|148803520|gb|EDL44919.1| DNA primase, large subunit, putative [Plasmodium vivax]
Length = 547
Score = 204 bits (519), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 128/405 (31%), Positives = 215/405 (53%), Gaps = 34/405 (8%)
Query: 75 NMRHPEASEDVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFL------------ 122
N E + D++SH++LR+ + + ++ ++WFL E L+ +R
Sbjct: 140 NYSKEEMENIIMTDLLSHYILRIAFAKDKEKQQWFLKQELKLFIFRLNELKNINVLNAHN 199
Query: 123 LGSSEAKRA-LMEEFDLPCKAISRTEFEN--AKEKLEQVARSFDQPLPTADAI--FYKVP 177
LG SE L++ +L + +S+ + AK++ + SF +P D I +K+P
Sbjct: 200 LGESERGLIHLLKRENLNYEFLSKPVISSFGAKDEAWEKYTSF---IPNRDTIEKVFKIP 256
Query: 178 FEEVPE---LVAGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQ 234
F P+ LV +V + K AYV + +++VTQF+ + ++ + +
Sbjct: 257 F--FPDAYFLVKDHKVCVDKAIAYVPDIYLDAILVTQFKITIKESFKYLEQNEKLLLNVH 314
Query: 235 ERDRLTPIVEALSMSYLGPDYSQTKEFGE---ISIKDLDQLARSSFPLCMRHLFDKLRED 291
R++ + AL +Y+ DY Q E + + ++L + + SFP CMR +F ++
Sbjct: 315 NDSRISSFLAALPKAYVAKDYRQNYEHTQETRLMPQNLYSVYKQSFPPCMRRIFVNFLKE 374
Query: 292 HHLKHGGRMQLGLFLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKR 351
HLKH GR QL LFLKG G+ +E+ + ++ S + ++FDKE+ Y+IR+ YGKEGK+
Sbjct: 375 KHLKHWGRQQLWLFLKGAGMTLEENI---QSNRSIWLQPDKFDKEHRYTIRYMYGKEGKK 431
Query: 352 TDYTPYSCQKIISS--TPGVGDHHGCPYRHFSEENLRAALGRMGVGSRAMEDVVDKVRNR 409
TD++PY+C KII++ P GD HGCP+++F E +LR+ L G+ + +++ R+
Sbjct: 432 TDFSPYNCSKIINNFPVPSSGDTHGCPFKNFDEAHLRSLLFFFGLSDEQIRNIMPLKRSN 491
Query: 410 HYQLACTLTFEAVH-SSSCDAGINHPNQYFSDSHKILQPKNNNAA 453
YQ+AC F H SS D NHPN Y+ +S K + K N A
Sbjct: 492 EYQMACVTFFMETHPGSSADGVGNHPNSYYIESRKYYKAKATNGA 536
>gi|402867356|ref|XP_003897823.1| PREDICTED: DNA primase large subunit-like [Papio anubis]
Length = 328
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 106/242 (43%), Positives = 152/242 (62%), Gaps = 12/242 (4%)
Query: 87 KDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKRALMEEFDLPCKAISRT 146
+D ISHF+LRL YC++E+LR+WF+ E L R+RF + + + +++ L +AIS
Sbjct: 75 RDHISHFILRLAYCQSEELRRWFIQQEMDLLRFRFSILPKDKIQDFLKDSQLQFEAISDE 134
Query: 147 EFENAKEKLEQVARSFDQPLPTADAI----FYKVPFEEVPELVAGRRVYIHKGHAYVAMH 202
E + +E+ E +A S P + + YK+PF + +L GR+VY+ G AYV +
Sbjct: 135 E-KTLREQ-EIIASS---PNSSGSKVVLESIYKIPFADALDLFRGRKVYLEDGFAYVPLK 189
Query: 203 QVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEALSMSYLGPDYSQTKEFG 262
+V++++ +FR+ LSKAL LT R + Q +RL P++ LS SY G DYS G
Sbjct: 190 DIVAIILNEFRAKLSKALALTARSLPAV---QSDERLQPLLNHLSHSYTGQDYSTQGNVG 246
Query: 263 EISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWKA 322
+IS+ +D L+ SFP CMR L LRE+HHL+HGGRMQ GLFLKG+GL +E AL FWK
Sbjct: 247 KISLDQIDSLSTKSFPPCMRQLHKALRENHHLRHGGRMQYGLFLKGIGLTLEQALQFWKQ 306
Query: 323 EF 324
EF
Sbjct: 307 EF 308
>gi|281207662|gb|EFA81842.1| DNA polymerase alpha primase subunit [Polysphondylium pallidum
PN500]
Length = 484
Score = 201 bits (512), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 152/472 (32%), Positives = 236/472 (50%), Gaps = 49/472 (10%)
Query: 4 VRSQRSRTNTPNDSVST----LP-LYRYAPQLEV-RLEDFEVFAMDRLRVLKGISDALAR 57
+RS + N +DS +T LP LY P LE+ + E + RL +LK IS LA+
Sbjct: 5 LRSINKQQNV-DDSTTTRKHILPNLYCTLPTLEILNMSQLESMCLSRLSLLKSIS--LAK 61
Query: 58 GKRPEEMENLVRDLWKANMRHPEASEDVNKDIISHFVLRLVYCRTEDLRKWFLSMETALY 117
+ +E N L + +KD SH++LRL + DL +WF+ E L
Sbjct: 62 LELSKEQCNQQIGLLLKAFSDRDEELYQSKDETSHYLLRLAMANSSDL-EWFIQQEMLLL 120
Query: 118 RYRFL-LGSSEAKRALMEEFDLPCKAISRTEFE-NAKEKL-----EQVARSFDQPLPTAD 170
RYR + + ++ L + ++ EF+ NA++ + R+ TAD
Sbjct: 121 RYRLENITIEQFQQFLQKNAGFGWSVLNEEEFQLNARDLFYLYDSKLYKRALGVEKDTAD 180
Query: 171 ---------------AIFYKVPFEEVPELVAGRRVYIHKGHAYVAMHQVVSLVVTQFRSN 215
+ F K+PF+EV +L+A ++V + +G AY+A H+ +++ FRS
Sbjct: 181 NEDPVLRIAKVSCVYSDFLKMPFQEVSQLIARKKVLLKRGVAYIAKHEFHDVIIESFRSY 240
Query: 216 LSKALILTNRKWTSTIREQERDRLTPIVEALSMSYLG-PDYSQ---TKEFGEISIKDLDQ 271
L A+ IRE E R+ LS + P S T G+I+ ++
Sbjct: 241 LIFAM--------DRIRE-EYQRIAESYPHLSSFFRSLPKQSGIAVTANHGKITAAEIAP 291
Query: 272 LARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWKAEFSQKVGAE 331
++R SFP+CMR + D L + LK+ GR+Q FLK +GL EDA+ +WK+ F+++V
Sbjct: 292 ISRQSFPMCMRVMHDGLLKMGKLKYDGRLQFSTFLKAIGLSYEDAIGYWKSSFAKRVSGA 351
Query: 332 RFDKEYAYSIRHNYGKEGKRTDYTPYSCQKIISSTPGVGDH-HGCPYRHFSEENLRAALG 390
FDKEYAY +RH YG EGK Y+P SC KIIS P + HGCPY +S+E L L
Sbjct: 352 EFDKEYAYMVRHTYGLEGKGISYSPSSCAKIISKVPKNSEEIHGCPYV-WSQEKLEQRLR 410
Query: 391 RMGVGSRAMEDVVDKVRNRHYQLACTLTFEAVH-SSSCDAGINHPNQYFSDS 441
GV + ++++ + LAC F+ +H ++ + +NHPNQ++ S
Sbjct: 411 DYGVDDITINEIINATQISP-NLACGKHFDYLHKDNTFNIKVNHPNQFYDSS 461
>gi|440636026|gb|ELR05945.1| hypothetical protein GMDG_01907 [Geomyces destructans 20631-21]
Length = 431
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 129/361 (35%), Positives = 192/361 (53%), Gaps = 20/361 (5%)
Query: 21 LPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEEMENLVRDLWKANM---- 76
L Y P ++ LE FE +A+DRLRVL + R K P E ++ L +
Sbjct: 38 LNFYILPPTADITLEQFEQWAIDRLRVLAELEACSFRNKTPAETAAHMKPLMDKYLPLSS 97
Query: 77 ---RHPEASEDVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKRALM 133
P + + KD SHF+LRL + TEDLR+ F +ETAL+R RF + + A +
Sbjct: 98 SSSASPNLALERKKDHYSHFILRLAFASTEDLRRRFARVETALFRLRFQSDDARERGAFV 157
Query: 134 EEFDLPCKAISRTEFENAKEKLEQVARSFDQPLPTADAIFYKVPFEEVPELVAGRRVYIH 193
+L +A+ E + +L + + D ++KV + +VPELV RRV +
Sbjct: 158 AGLNLEWEAVGEAERKELLPELVAAGQG-RKASEMVDEGWFKVDWMKVPELVESRRVLLK 216
Query: 194 KGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEALSMSYLGP 253
G+AYV + +S+V+ +F + L KAL T+R + R E DRL+PI+ LS ++L P
Sbjct: 217 GGYAYVPGREQMSMVLAEFTARLDKALEQTSR---ALPRLDEDDRLSPILAHLSSTFLTP 273
Query: 254 DYSQTKEF--GEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGL 311
+ G I+ + L +FPLCM L L HHLKH R+Q LFLKG+GL
Sbjct: 274 ASTAPSSMVAGTITAASIPSLL-PNFPLCMSTLGTTLATTHHLKHYARLQYTLFLKGLGL 332
Query: 312 RMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYG-----KEGKRTDYTPYSCQKIISST 366
+ D+L +W++ FS V + F+KEY Y+IRH+YG + Y+P+SCQKI++
Sbjct: 333 SLADSLQYWRSGFS-AVTDDTFNKEYRYNIRHSYGDVGGDGNRRGGGYSPFSCQKILTEH 391
Query: 367 P 367
P
Sbjct: 392 P 392
>gi|221054486|ref|XP_002258382.1| dna primase, large subunit [Plasmodium knowlesi strain H]
gi|193808451|emb|CAQ39154.1| dna primase, large subunit, putative [Plasmodium knowlesi strain H]
Length = 548
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 122/403 (30%), Positives = 213/403 (52%), Gaps = 30/403 (7%)
Query: 75 NMRHPEASEDVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRF-------LLGS-- 125
N E + D++SH++LR+ + + ++ ++WFL E L+ +R +L S
Sbjct: 141 NYSKEEMENIIMTDLLSHYILRIAFAKDKEKQQWFLKQELKLFIFRLNELKNINVLNSHN 200
Query: 126 -SEAKRALMEEFD---LPCKAISRTEFENAKEKLEQVARSFDQPLPTADAI--FYKVPFE 179
E++R L+ + L + +S+ + K ++ + +P D I +K+PF
Sbjct: 201 LGESERGLIHLLNRENLNYEFLSKPMISSFGVK-DEAWEKYTSFIPNRDTIEKVFKIPF- 258
Query: 180 EVPE---LVAGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQER 236
P+ LV +V + K AYV + ++VTQF+ + ++ ++ + Q
Sbjct: 259 -FPDAYFLVKDHKVCVDKAIAYVPDIYLDVILVTQFKITIKESFKYLDQNEKLLLNVQND 317
Query: 237 DRLTPIVEALSMSYLGPDYSQTKEFGE---ISIKDLDQLARSSFPLCMRHLFDKLREDHH 293
R++ + AL +Y+ DY Q E + + ++L + + SFP CMR +F ++ H
Sbjct: 318 SRISSFLTALPKAYVAKDYRQNYEHTQETRLMPQNLYNVYKQSFPPCMRRIFVNFLKEKH 377
Query: 294 LKHGGRMQLGLFLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTD 353
LKH R QL LFLKG G+ +E+ + ++ + Q A++FDKE+ Y+IR+ YGKEGK+TD
Sbjct: 378 LKHWARQQLWLFLKGAGMTLEENIHSNRSIWLQ---ADKFDKEHRYTIRYMYGKEGKKTD 434
Query: 354 YTPYSCQKIISS--TPGVGDHHGCPYRHFSEENLRAALGRMGVGSRAMEDVVDKVRNRHY 411
++PY+C II++ P GD HGCP+++F E +L++ L G+ +++++ N Y
Sbjct: 435 FSPYNCSSIINNFPIPSSGDTHGCPFKNFDEAHLKSLLFFFGLTDGQIKNIMPFKMNNEY 494
Query: 412 QLACTLTFEAVHSSSCDAGI-NHPNQYFSDSHKILQPKNNNAA 453
Q+AC F H S G+ NHPN Y+ +S K + K N
Sbjct: 495 QMACVKFFMETHPGSSADGVGNHPNSYYIESRKYYKSKATNGT 537
>gi|340056917|emb|CCC51256.1| putative DNA primase large subunit [Trypanosoma vivax Y486]
Length = 578
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 130/394 (32%), Positives = 199/394 (50%), Gaps = 35/394 (8%)
Query: 84 DVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKR----ALMEEFDLP 139
D ++D++SH + R V+C + RKWF+ E L R R L +++ + LM+E LP
Sbjct: 141 DADEDLLSHRLSRFVFCMADKWRKWFVRTEETLLRARLRLQAAKCEADFLPTLMKENGLP 200
Query: 140 CKAISRTEFENAKEKLEQ--VARSFDQPLPTADAI--FYKVPFEEVPELVAGRRVYIHKG 195
C +S E + A++KL+ V +F Q I ++ VP L+ R V KG
Sbjct: 201 CDPLS--EAQRAEKKLQDYIVYHAFIQGRGQVRNIDEYFSVPLALATRLIKTRSVLCLKG 258
Query: 196 HAYVAMHQVVSLVVTQFRSNLSKAL---ILTNRKWTSTIREQERDRLTPIVEALSMSYLG 252
HA + QV + VT F S L+K L L K S + ER+ + +++A ++
Sbjct: 259 HAILHRDQVQEVFVTMFLSKLNKGLHEAYLARMKLASHEDDDERETVVRMLDAFLEYFIA 318
Query: 253 --PDYSQTKEFGEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVG 310
++ Q G + D+ +LA++ FPLCMR + + LR + HLKH GR GLFLK +G
Sbjct: 319 DAENFMQDAPSGAVGSGDVRRLAQTHFPLCMRQMDEHLRHEGHLKHYGRFTYGLFLKAIG 378
Query: 311 LRMEDALAFWKAEFSQKVGA----ERFDK-EYAYSIRHNYGKEGKRTDYTPYSCQKIISS 365
L M+DA+ + + K G E F K Y Y+IRHNYG EGK+T Y+ SC ++
Sbjct: 379 LPMDDAMVLFSTLMTLKGGGAGNVEGFAKTSYGYNIRHNYGMEGKKTSYSSMSCTSLLGL 438
Query: 366 TPGVG--DHHGCPYRHFSEENLRAALGR------------MGVGSRAMEDVVDKVRNRHY 411
P V D HGCP+R +E + R L R + + + +ED++ R +HY
Sbjct: 439 PPVVDKFDCHGCPFRFKNESSFRNVLLREQLNPLGKDYAPVRLNASDIEDIIQDCRGQHY 498
Query: 412 QLACTLTFEAVHSSS-CDAGINHPNQYFSDSHKI 444
AC F A H + D P +Y++ S ++
Sbjct: 499 TRACYKYFMATHPGARRDTLFRSPYEYYAVSREM 532
>gi|74177693|dbj|BAE38946.1| unnamed protein product [Mus musculus]
Length = 246
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 91/171 (53%), Positives = 120/171 (70%), Gaps = 2/171 (1%)
Query: 234 QERDRLTPIVEALSMSYLGPDYSQTKEFGEISIKDLDQLARSSFPLCMRHLFDKLREDHH 293
Q +RL P++ LS SY G DYS K G+IS+ +D L+ SFP CMR L LRE+HH
Sbjct: 36 QSDERLQPLLNHLSHSYTGQDYSTQKNTGKISLDQIDSLSTKSFPPCMRQLHKALRENHH 95
Query: 294 LKHGGRMQLGLFLKGVGLRMEDALAFWKAEFSQ-KVGAERFDKEYAYSIRHNYGKEGKRT 352
L+HGGRMQ GLFLKG+GL +E AL FWK EF + K+ ++FDK Y+Y+IRH++GKEGKRT
Sbjct: 96 LRHGGRMQYGLFLKGIGLTLEQALQFWKQEFIRGKMDPDKFDKGYSYNIRHSFGKEGKRT 155
Query: 353 DYTPYSCQKII-SSTPGVGDHHGCPYRHFSEENLRAALGRMGVGSRAMEDV 402
DYTP+SC KII ++ PG GD+HGCP+RH E L+ + + + + V
Sbjct: 156 DYTPFSCMKIILTNPPGQGDYHGCPFRHSDAELLKQKMQSYKIPASGISQV 206
>gi|328868354|gb|EGG16732.1| DNA polymerase alpha primase subunit [Dictyostelium fasciculatum]
Length = 491
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 135/434 (31%), Positives = 208/434 (47%), Gaps = 58/434 (13%)
Query: 47 VLKGISDALAR--GKRPEEMENLVRDLWKANMRHPEASEDVN--KDIISHFVLRLVYCRT 102
+LK ISDA G E + +R + SE++ KD SHF+LRL C +
Sbjct: 47 ILKTISDAKTNISGNNKLEFDEAMRS---GLVEFINQSEELYQYKDECSHFLLRLAMCTS 103
Query: 103 EDLRKWFLSMETALYRYRFLLGSSEAKRALMEEF-DLPCKAISRTEFENAKEKLEQVARS 161
+D R WF+ E L +YR ++ ++ ++++ + +S EF+ K+ L +
Sbjct: 104 DD-RDWFIQQEINLLKYRLEQATAAETQSFLQQYSEFGWNPVSTEEFDQYKDSLNYIYNE 162
Query: 162 FDQPL--------------------PTADAIFYKVPFEEVPELVAGRRVYIHKGHAYVAM 201
Q P + F K+ F+EVP LV ++V + KG AY+
Sbjct: 163 KKQRQEKTKTAGNINIKSKANLNIKPFGNDTFIKIAFQEVPYLVMRKKVVVQKGVAYILR 222
Query: 202 HQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLT---PIVEALSMSY------LG 252
+ +V +RS L L +RE E++RL P + + LG
Sbjct: 223 SDIADVVAETYRSYLQFTL--------DAVRE-EKERLKMQFPDIYDFFATLPKCNNPLG 273
Query: 253 PDYSQTKEFGEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLR 312
+ TK G + ++ L+++SFPLCMR + D L + LKH GR+Q FLKG+G
Sbjct: 274 N--ATTKVQGRVGPLEIAPLSKTSFPLCMRVMHDTLVQTGKLKHEGRLQFSTFLKGIGFV 331
Query: 313 MEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQKIISSTPGVGDH 372
EDA+ +WK FS+KV FDK+Y+Y+ RH YG EGK T Y+PY+C KI P +
Sbjct: 332 YEDAIVYWKQMFSKKVSGADFDKDYSYTFRHTYGLEGKATSYSPYACLKIQQKIPNAIEQ 391
Query: 373 -HGCPYRHFSEENLRAALGRMGVGSRAMED--VVDKVRNRHYQLACTLTFEAVH--SSSC 427
HGCPY + + L+ L + + +ED V K+ +AC F +H + +
Sbjct: 392 VHGCPYM-WESDKLQQKLQSLNIDQFVIEDMLVTSKIS---MNVACGKHFAFLHPKNRTN 447
Query: 428 DAGINHPNQYFSDS 441
+NHPNQ++ S
Sbjct: 448 FTVVNHPNQFYEQS 461
>gi|389582949|dbj|GAB65685.1| DNA primase large subunit [Plasmodium cynomolgi strain B]
Length = 430
Score = 192 bits (487), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 121/374 (32%), Positives = 203/374 (54%), Gaps = 34/374 (9%)
Query: 106 RKWFLSMETALYRYRF-------LLGS---SEAKRALMEEF---DLPCKAISRTEFEN-- 150
++WFL E L+ +R +L S E++R L+ +L + +S+ +
Sbjct: 54 QQWFLKQELKLFIFRLNELKNINVLNSQNFGESERGLIHLLKRENLHYEFLSKPVISSFG 113
Query: 151 AKEKLEQVARSFDQPLPTADAI--FYKVPFEEVPE---LVAGRRVYIHKGHAYVAMHQVV 205
AK++ + SF +P D I +K+PF P+ LV +V + K AYV +
Sbjct: 114 AKDETWEKYTSF---IPNRDTIEKVFKIPF--FPDAYFLVKDHKVCVDKAIAYVPDIYLD 168
Query: 206 SLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEALSMSYLGPDYSQTKEFGE-- 263
+++VTQF+ + ++ + + Q R++P + AL +Y+ DY Q E +
Sbjct: 169 AILVTQFKITIKESFKYLEQNEKLLLNVQNDSRISPFLAALPKAYVAKDYRQNYEHTQET 228
Query: 264 -ISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWKA 322
+ ++L + + SFP CMR +F ++ HLKH GR QL LFLKG G+ +E+ + ++
Sbjct: 229 RLMPQNLYTVYKQSFPPCMRRIFVNFLKEKHLKHWGRQQLWLFLKGAGMTLEENI---QS 285
Query: 323 EFSQKVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQKIISS--TPGVGDHHGCPYRHF 380
S + ++FDKE+ Y+IR+ YGKEGK+TD++PY+C KII++ P GD HGCP+++F
Sbjct: 286 NRSIWLQPDKFDKEHRYTIRYMYGKEGKKTDFSPYNCSKIINNFPVPSSGDTHGCPFKNF 345
Query: 381 SEENLRAALGRMGVGSRAMEDVVDKVRNRHYQLACTLTFEAVHSSSCDAGI-NHPNQYFS 439
E +LR+ L G+ +++++ R+ YQ+AC F +H S G+ NHPN Y+
Sbjct: 346 DEAHLRSLLFFFGLTDDQIKNIMPLKRSNEYQMACVKFFMEMHPGSSADGVGNHPNSYYI 405
Query: 440 DSHKILQPKNNNAA 453
+S K + K N
Sbjct: 406 ESRKYYKSKATNGT 419
>gi|66359740|ref|XP_627048.1| DNA primase large subunit [Cryptosporidium parvum Iowa II]
gi|46228808|gb|EAK89678.1| DNA primase large subunit [Cryptosporidium parvum Iowa II]
Length = 538
Score = 191 bits (485), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 120/406 (29%), Positives = 210/406 (51%), Gaps = 55/406 (13%)
Query: 87 KDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRF--LLGSS----------EAKRALME 134
KD++SHF+L+L + ++ ++WF+ E L ++ ++ S+ +K ++E
Sbjct: 124 KDLLSHFLLKLCFMNNKEKQEWFIEQEIKLLLFKLSTIINSNLFNQKRDNIKSSKSFIIE 183
Query: 135 EF------DLPCKAISRTEFENAKEKLE--QVARSFDQPLPTAD-----AIFYKVPF-EE 180
+ + P + + + +N E Q + ++ + +K+PF +
Sbjct: 184 KLLKMYGVNYPIWNLDQIKNQNNINDSETHQAKKLWEDAVSVITNGHLIKRLFKIPFWPD 243
Query: 181 VPELVAGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALI-------------LTNRKW 227
+ R+ +I G ++ ++ SL + +++ L + I L++++
Sbjct: 244 GFRFIKNRKYFIKDGICFIPDTEIESLFIYKYKKELINSFINLKENEIILEKTILSDQRV 303
Query: 228 TSTIREQERDRLTPI-----VEALSMSYLGPDYSQTKEFGEISIKDLDQLARSSFPLCMR 282
+S IRE T LS + +Q E ++ ++ Q+ SSFPLCMR
Sbjct: 304 SSLIREISEFYFTSNDFRGGGSLLSSPFNSLSENQAIENFKLDTSNIYQVYLSSFPLCMR 363
Query: 283 HLFDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIR 342
HLF+ L++DHHLKH R+QL LFLKG G+++E+ L+ WK+ ++ A FDKE Y+IR
Sbjct: 364 HLFESLKKDHHLKHWSRLQLWLFLKGCGMKLEEQLSLWKSLWTD---ANSFDKEIKYNIR 420
Query: 343 HNYGKEGKRTDYTPYSCQKIISS--TPGVGDHHGCPYRHFSEENLRAAL----GRMGVGS 396
H YG+EGKR++Y+PY C KII+ PG G +HGCP++ F L+ L G + + +
Sbjct: 421 HAYGQEGKRSNYSPYPCNKIINGLPLPGNGQNHGCPFKTFDNYPLQKLLQTYYGHI-IPN 479
Query: 397 RAMEDVVDKVRNRHYQLACTLTFEAVHSSSCDAGI-NHPNQYFSDS 441
++++ ++ HYQL+C F+++H S GI NHPN YF S
Sbjct: 480 EDIKNITQLSKSGHYQLSCIQLFKSLHLKSDSDGIGNHPNSYFKKS 525
>gi|307170262|gb|EFN62622.1| DNA primase large subunit [Camponotus floridanus]
Length = 425
Score = 191 bits (484), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 121/406 (29%), Positives = 208/406 (51%), Gaps = 38/406 (9%)
Query: 21 LPLYRYAPQLEVRLEDFEVFAMDRLRVL--------KGISDALARGKRPEEMENLVRDLW 72
L LY+ P E+ L++ RL+VL + ++ ++++ K L+++L+
Sbjct: 25 LQLYQNVPFGEIMLDELREICETRLKVLTLVERIHLQKLTMSVSQRKVA-----LIKELY 79
Query: 73 KANMRH-----------PEASEDVN---KDIISHFVLRLVYCRTEDLRKWFLSMETALYR 118
K + ED+ +D ISHF+L+ V + ++WF E L++
Sbjct: 80 KEGIDEFAKLINSSGCESHTDEDIRVRRRDHISHFILKSVVAFNKLKKRWFFKQEARLFK 139
Query: 119 YRFLLGSSEAKRALMEEFDLPCKAISRTEFENAKEKLEQVARSFDQPLPTADAI-FYKVP 177
+RF ++E + M + IS++E E+ KE L+ + + ++I FYKV
Sbjct: 140 WRFSSLNNEGIKQFMRINNFNFTPISQSEKEDIKEYLQMSS----PHISNINSIRFYKVL 195
Query: 178 FEEVPELVAGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERD 237
F V LV R+V++ G A+V ++ + V F+ L + + ++
Sbjct: 196 FSHVISLVKKRKVFVMNGEAFVPEGEIAFVFVPYFKRILISSFEAAREDRANLYNDE--- 252
Query: 238 RLTPIVEAL--SMSYLGPDYSQTKEFGE-ISIKDLDQLARSSFPLCMRHLFDKLREDHHL 294
R T I L ++ Q KE + +S+ LD+L+ +S+PLCMR L LR++HHL
Sbjct: 253 RFTHIFANLENNIHIENTILVQDKELQQYVSLDRLDKLSETSYPLCMRVLHKTLRKNHHL 312
Query: 295 KHGGRMQLGLFLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTDY 354
HGGR+Q LFLKG+G+ + DA+ WK EF++ + F+K+Y+Y +R +G+EG R DY
Sbjct: 313 THGGRIQYCLFLKGIGISLSDAMILWKNEFTKIMDEATFNKKYSYQVRFAFGQEGSRRDY 372
Query: 355 TPYSCQKIISSTPGVGDHHGCPYRHFSEENLRAALGRMGVGSRAME 400
P++C KI+ S G D+HGCP++H ++ L L G + ++
Sbjct: 373 QPFTCLKIMESIVGPRDYHGCPFKHMLQDVLENELTNCGFNALGLD 418
>gi|13358936|dbj|BAB33081.1| hypothetical protein [Macaca fascicularis]
Length = 222
Score = 189 bits (480), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 88/168 (52%), Positives = 117/168 (69%), Gaps = 3/168 (1%)
Query: 281 MRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWKAEFSQ-KVGAERFDKEYAY 339
MR L LRE+HHL+HGGRMQ GLFLKG+GL +E AL FWK EF + K+ ++FDK Y+Y
Sbjct: 1 MRQLHKALRENHHLRHGGRMQYGLFLKGIGLTLEQALQFWKQEFIKGKMDPDKFDKGYSY 60
Query: 340 SIRHNYGKEGKRTDYTPYSCQKII-SSTPGVGDHHGCPYRHFSEENLRAALGRMGVGSRA 398
+IRH++GKEGKRTDYTP+SC KII S+ P GD+HGCP+RH E L+ L +
Sbjct: 61 NIRHSFGKEGKRTDYTPFSCLKIILSNPPSQGDYHGCPFRHSDPELLKQKLQSYKISPGG 120
Query: 399 MEDVVDKVRNRHYQLACTLTFEAVHS-SSCDAGINHPNQYFSDSHKIL 445
+ ++D + HYQ+AC FE +H+ C +NHPNQ+F +S +IL
Sbjct: 121 ISQILDLAKGTHYQVACQKYFEMIHNVDDCGFSLNHPNQFFCESQRIL 168
>gi|71027601|ref|XP_763444.1| DNA primase large subunit [Theileria parva strain Muguga]
gi|68350397|gb|EAN31161.1| DNA primase large subunit, putative [Theileria parva]
Length = 624
Score = 189 bits (479), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 125/401 (31%), Positives = 196/401 (48%), Gaps = 60/401 (14%)
Query: 87 KDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKRALMEEFD--------- 137
+D+ISHF+LR+ + R +D WF+ E L+ R + ++E D
Sbjct: 119 RDVISHFILRMAFSREKDKMDWFVKNECKLFDIRL----ERLRSVKVQEVDGVDKLETFL 174
Query: 138 ---------LPCKAISRTEFE-----------------NAKEKLEQVARSFDQPLPTADA 171
+ AI++ + N+ +KL QV T
Sbjct: 175 HNQGIKYPVVKNPAITKGRYMTKELIDFTDLIRFRPDVNSIDKLYQVIH-------TIIT 227
Query: 172 IFYKVPF-EEVPELVAGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWT-- 228
+ VPF + +LV + V I AYV + + ++ T+FR+ L ++ N +
Sbjct: 228 SIFMVPFYPDANQLVRMKLVAIKNSIAYVPPNSLFIVISTKFRNELQHSMKYLNENQSML 287
Query: 229 -STIREQERDRLTPIVEALSMSYLGPDYSQTK--EFGEISIKDLDQLARSSFPLCMRHLF 285
S I ER L + L SYL DYS+ + +++ +++Q+ + +FP CMR +F
Sbjct: 288 DSVIVNDER--LCDFMRVLPESYLANDYSKITFTDDTRLTLSNINQVYKFTFPPCMRRMF 345
Query: 286 DKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNY 345
L ++HH+KH GR QL LFLKG GL ME++L + ++ + FDKE+AY+IRH Y
Sbjct: 346 SHLLKNHHIKHEGRQQLWLFLKGCGLTMEESLQLNRTLWND---SGNFDKEHAYNIRHLY 402
Query: 346 GKEGKRTDYTPYSCQKIISSTPG--VGDHHGCPYRHFSEENLRAALGRMGVGSRAMEDVV 403
GKEGKRT Y PYSC ++I ++P G HGCP++ ++L L G+ S +E ++
Sbjct: 403 GKEGKRTSYPPYSCTRMIKNSPPNVSGTAHGCPFKELDPKSLYQLLQEFGLNSTQIEPII 462
Query: 404 DKVRNRHYQLACTLTFEAVHSSSCDAGI-NHPNQYFSDSHK 443
D + +QLAC F ++C GI PN +F S K
Sbjct: 463 DLKTSFQFQLACVEYFNQTTPNACADGIGTSPNTFFHSSFK 503
>gi|399216106|emb|CCF72794.1| unnamed protein product [Babesia microti strain RI]
Length = 518
Score = 188 bits (478), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 144/478 (30%), Positives = 230/478 (48%), Gaps = 60/478 (12%)
Query: 20 TLPLYRYAP-QLEVRLEDFEVFAMDRLRVLKGISDALARGKR------------------ 60
+ LY++AP + + L F+ A RL +L+ I D RG R
Sbjct: 26 VVSLYQWAPLEGALNLRCFQEIAAKRLALLQYI-DETYRGGRMKATSEANKLTSDTKSGN 84
Query: 61 --------PEEMENLVRDLWKANMRHPEASEDV---NKDIISHFVLRLVYCRTEDLRKWF 109
++MEN L K ++ + A E + DIISHF+LRL + + + ++WF
Sbjct: 85 CNKLSNFIEDKMENFGFALRKNSIFNSTAEERLKLAQVDIISHFILRLAFAKDWNKKEWF 144
Query: 110 LSMETALYRYRF--LLGSSEAKRALMEEFD-------LPCKAISRTEFEN---AKEKLEQ 157
L E+ L +R L GS + D + K I R N Q
Sbjct: 145 LKQESRLLEFRLEHLRGSKLINTDGVANLDIFLIREEIEYKTIQRPSVINDILYSSPKYQ 204
Query: 158 VARSFDQPLPTADAI--FYKVPF-EEVPELVAGRRVYIHKGHAYVAMHQVVSLVVTQFRS 214
+ F + +I Y VPF + LV +V ++ AYV ++ +VT+F+
Sbjct: 205 LWSDFMYQKKESGSISKLYLVPFYPDGMNLVKNHKVALNDMTAYVPYDFLIQAIVTKFKH 264
Query: 215 NLSKAL--ILTNRKWTST-IREQERDRLTPIVEALSMSYLGPDYSQTKEFGE---ISIKD 268
+L+++L + +N +W T I E RL P + L +YL DY +T + + ++I +
Sbjct: 265 DLNQSLEMLESNMEWIYTEIFSDE--RLGPFLRVLPSTYLANDYEKTLDVDDGTRLTIAN 322
Query: 269 LDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWKAEFSQKV 328
+++L + +FP CMR +F++ D +KH R QL LF KG G+ + D+LA ++ +S
Sbjct: 323 INKLYKIAFPPCMRRIFEQYLVDGKMKHWARQQLWLFFKGAGMGLNDSLALNRSIWSN-- 380
Query: 329 GAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQKIIS--STPGVGDHHGCPYRHFSEENLR 386
FDKE+ Y++RH YG+EG+R Y PYSC KIIS P G HGCP++ + ++ L
Sbjct: 381 -PSSFDKEHRYNLRHMYGQEGRRVTYPPYSCSKIISVLPPPTGGSTHGCPFKLYDKQGLS 439
Query: 387 AALGRMGVGSRAMEDVVDKVRNRHYQLACT-LTFEAVHSSSCDAGINHPNQYFSDSHK 443
G+ +E +++ YQLAC + +SS D NHPN +F+ + K
Sbjct: 440 KMFKGYGLREPQIESILEYTNTHQYQLACVEYLLQTCPNSSGDGVGNHPNAFFTAAIK 497
>gi|339257846|ref|XP_003369109.1| DNA primase large subunit [Trichinella spiralis]
gi|316966669|gb|EFV51214.1| DNA primase large subunit [Trichinella spiralis]
Length = 373
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 87/180 (48%), Positives = 123/180 (68%), Gaps = 6/180 (3%)
Query: 271 QLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWKAEFSQKVGA 330
+L+ +SF LCMR L+D+L+ HHL+HGGRMQLGLFLK +GL + ++L FW+ F K+ A
Sbjct: 165 KLSVTSFSLCMRRLYDELKSAHHLRHGGRMQLGLFLKKIGLSLNESLKFWEYHFRPKIDA 224
Query: 331 ERFDKEYAYSIRHNYGKEGKRTDYTPYSCQKII-SSTPGVGDHHG--CPYRHFSEENLRA 387
E+F ++YAYSIRHNYG+EGKR DY YSC KII ++ PG+GD HG CP++H E+L+
Sbjct: 225 EKFQRQYAYSIRHNYGEEGKRADYVAYSCLKIIMNNPPGIGDFHGSRCPFKHCDAEHLQQ 284
Query: 388 ALGRMGVGSRAMEDVVDKVRNRHYQLACTLTFEAVHS---SSCDAGINHPNQYFSDSHKI 444
L G+ ++++V+ N HY AC++ F+ +H I HPNQYF +S K+
Sbjct: 285 LLKNCGIHKDDIKNIVNYASNNHYNKACSIFFDCMHKLPEGGLGEFITHPNQYFDESRKL 344
>gi|322788794|gb|EFZ14362.1| hypothetical protein SINV_08167 [Solenopsis invicta]
Length = 419
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 123/409 (30%), Positives = 205/409 (50%), Gaps = 31/409 (7%)
Query: 11 TNTPNDSVS-TLPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISD------ALARGKRP-- 61
++ P D S L LY+ P E+ L++ + + RL+VL + ++ +R
Sbjct: 15 SSNPADVYSHDLQLYQNVPFGEITLDELQEISETRLKVLSLVEHIHLQKLTMSVSQRKAI 74
Query: 62 -------EEMENLVRDLWKANMRHPEASEDVN---KDIISHFVLRLVYCRTEDLRKWFLS 111
E ++ R + R D++ KD ISHF+LR V ++WF
Sbjct: 75 LVEMLCKEGLDEFARLIDSPGCR-SHTDMDIHNRRKDHISHFILRSVVAFDSLKKRWFFK 133
Query: 112 METALYRYRFLLGSSEAKRALMEEFDLPCKAISRTEFENAKEKLEQVARSFDQPLPTADA 171
E+ L+++RF E + + + I+++E E+ ++ L+ + +
Sbjct: 134 QESRLFKWRFSSLDDEGIKQFIRVNNFDLIPINQSEKEDIRDYLQISSPHVSN---INNT 190
Query: 172 IFYKVPFEEVPELVAGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTI 231
FY++PF + L+ R+V++ +G A+V + + + FR L + ++
Sbjct: 191 HFYRIPFSHIASLIKNRKVFVMQGEAFVPEQDLAFVFASHFRRILISNFEIAREARANSC 250
Query: 232 REQERDRLTPIVEALS--MSYLGPDYSQTKEFGE-ISIKDLDQLARSSFPLCMRHLFDKL 288
++ R T I L+ + KE + +S+ LD LA +S+PLCMR L L
Sbjct: 251 NDE---RFTGIFANLAKMIHTENTILVHDKEIQQYVSLNKLDMLAETSYPLCMRVLHKAL 307
Query: 289 REDHHLKHGGRMQLGLFLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKE 348
R++HHL HGGR+Q LFLKG+GL + DA+ WK EF++ + F KE++Y++R YG+E
Sbjct: 308 RKNHHLTHGGRVQYCLFLKGMGLSLSDAMTLWKDEFTKVMNDTAF-KEHSYTVRFVYGQE 366
Query: 349 GKRTDYTPYSCQKII-SSTPGVGDHHGCPYRHFSEENLRAALGRMGVGS 396
G R DY PY+C+KII SST G D+HGCP++H + L L G +
Sbjct: 367 GSRRDYQPYTCRKIIESSTVGPRDYHGCPFKHMLHDVLENELVDCGFSA 415
>gi|392887415|ref|NP_001251923.1| Protein PRI-2, isoform b [Caenorhabditis elegans]
gi|297374699|emb|CBM41229.1| Protein PRI-2, isoform b [Caenorhabditis elegans]
Length = 322
Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 105/291 (36%), Positives = 167/291 (57%), Gaps = 13/291 (4%)
Query: 162 FDQPLPTADAIFYKVPFEEVPELVAGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALI 221
F+ P T FYKV F + EL+ V++ KG AY +V+++VT+ ++N+ A+
Sbjct: 14 FEAPNKT----FYKVDFIDAIELIRRGSVHLKKGFAYFPFDDLVTILVTKMKNNMMAAMA 69
Query: 222 LTNRKWTSTIREQERDRLTPIVEALSMSYLGPDYSQTKEFGEISIKD--LDQLARSSFPL 279
+ + I E+E L + + +Y G DY+ + G I + +D+L+R SF
Sbjct: 70 RSFKHLA--ILEEEGRLLPRLSLLSNNAYSGKDYNGEQPDGSIIVTRHMIDKLSRRSFAP 127
Query: 280 CMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAY 339
CM+ + + LR +HHLK+G R Q GLFLKG+GL +++A+A + EF++K+ +++FDKEY Y
Sbjct: 128 CMKQMHNHLRVNHHLKYGARRQYGLFLKGIGLSLDEAIAMMRDEFTKKITSDKFDKEYGY 187
Query: 340 SIRHNYGKEGKRTDYTPYSCQKII-SSTPGVGDHHGCPYRHFSEENLRAALGRMGVGSR- 397
+IR+ YGKEG+R T SC II + P D HGCP+RH ++ L+ LG + +
Sbjct: 188 NIRYMYGKEGRRVAQTAMSCATIILRNPPSAVDCHGCPFRHSEKQVLKQKLGSDAILKKE 247
Query: 398 AMEDVVDKVRNRHYQLACTLTFEAVHS---SSCDAGINHPNQYFSDSHKIL 445
+E + + Y ACT FE +H+ I HPNQ++ +S KI+
Sbjct: 248 QIERIAELAELNQYDKACTRYFEFMHNLEEGGLGQLITHPNQFYEESQKIV 298
>gi|351694370|gb|EHA97288.1| DNA primase large subunit [Heterocephalus glaber]
Length = 220
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 85/168 (50%), Positives = 118/168 (70%), Gaps = 3/168 (1%)
Query: 281 MRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWKAEFSQ-KVGAERFDKEYAY 339
MR L LRE+HHL+HGGRMQ GLFLKG+GL +E AL FWK EF + ++ ++FD+ Y+Y
Sbjct: 1 MRQLHKALRENHHLRHGGRMQYGLFLKGIGLTLEQALEFWKREFVRGEMDPDKFDRGYSY 60
Query: 340 SIRHNYGKEGKRTDYTPYSCQKII-SSTPGVGDHHGCPYRHFSEENLRAALGRMGVGSRA 398
+IRH++ KEGKRTDYTPYSC KII ++ PG GD+HGCP+ H E L+ L + S+
Sbjct: 61 NIRHSFRKEGKRTDYTPYSCMKIILTNPPGQGDYHGCPFHHSDPELLKQKLQSYKISSQR 120
Query: 399 MEDVVDKVRNRHYQLACTLTFEAVHS-SSCDAGINHPNQYFSDSHKIL 445
+ ++D ++ HYQ+AC FE +H+ C +NHP+Q+F +S IL
Sbjct: 121 ISQILDLIKGTHYQVACQKYFEMIHNVDDCGFSLNHPSQFFDESQWIL 168
>gi|170071078|ref|XP_001869805.1| DNA primase large subunit [Culex quinquefasciatus]
gi|167867027|gb|EDS30410.1| DNA primase large subunit [Culex quinquefasciatus]
Length = 273
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 83/159 (52%), Positives = 109/159 (68%), Gaps = 1/159 (0%)
Query: 281 MRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWKAEFSQ-KVGAERFDKEYAY 339
MR D LR HH +HGGRMQ GLFLKG+G+ +ED+L FW+ EF++ V ++F+K+YAY
Sbjct: 1 MRMCHDTLRSTHHHRHGGRMQYGLFLKGIGVTLEDSLRFWREEFTRGTVALDKFEKDYAY 60
Query: 340 SIRHNYGKEGKRTDYTPYSCQKIISSTPGVGDHHGCPYRHFSEENLRAALGRMGVGSRAM 399
+IRHNYGKEG R +YTPYSC KII S+ G D HGCP++ + L+ LG G+G+
Sbjct: 61 NIRHNYGKEGSRVNYTPYSCMKIIMSSVGPTDTHGCPFKIWDPSVLQTKLGSYGLGAAHA 120
Query: 400 EDVVDKVRNRHYQLACTLTFEAVHSSSCDAGINHPNQYF 438
E++ V HYQ+AC+ FE H + GINHPNQYF
Sbjct: 121 EEIAGFVSKGHYQVACSKYFEVSHGLPLEEGINHPNQYF 159
>gi|407849819|gb|EKG04416.1| DNA primase large subunit, putative [Trypanosoma cruzi]
Length = 686
Score = 182 bits (461), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 120/389 (30%), Positives = 198/389 (50%), Gaps = 30/389 (7%)
Query: 86 NKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKR----ALMEEFDLPCK 141
++D+ISH + R +C +E RKWF+ E AL R R L ++ + +LM + LPC
Sbjct: 253 DEDLISHLLARFAFCMSEQWRKWFVKTEEALLRARLKLQMAKYEADFLPSLMRDNGLPCD 312
Query: 142 AISRTEFENA--KEKLEQVARSFDQPLPTADAIFYKVPFEEVPELVAGRRVYIHKGHAYV 199
+S ++++ +E + A + + ++ VP L+ R V KGHA +
Sbjct: 313 PLSDEQWQDPLLQEYIVYFAVFQGKQQSRSREDYFSVPMTLATRLIKTRSVLCLKGHAIL 372
Query: 200 AMHQVVSLVVTQFRSNLSKAL---ILTNRKWTSTIREQERDRLTPIVEALSMSYLGPDYS 256
Q + VT FRS L+K L L + TS ++ER+ + +++A ++ S
Sbjct: 373 HRDQAQEVFVTVFRSKLNKGLHEAYLARMRLTSNEDDEERETVMRMLDAFLEYFVSDPTS 432
Query: 257 QTKEF--GEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRME 314
+E G +S+ ++ ++A++ FPLCMR + + LR + HLKH GR GLFLK +GL ++
Sbjct: 433 AIQEAASGAVSVGEVRRIAQTHFPLCMRQVDEHLRREGHLKHHGRFTYGLFLKAIGLSLQ 492
Query: 315 DALAFWKAEFSQKVGA---ERFDKE-YAYSIRHNYGKEGKRTDYTPYSCQKIISSTPGVG 370
D++ + + + K A E F K Y Y+IRHNYG EGK+T Y+ SC +++ P V
Sbjct: 493 DSMTLFSSLMTVKGVAGNSEAFAKTAYGYNIRHNYGMEGKKTSYSSMSCATLLALPPVVD 552
Query: 371 --DHHGCPYRHFSEENLRAALGR------------MGVGSRAMEDVVDKVRNRHYQLACT 416
D HGCP+R E R+ L + + + +E++V + +HY AC
Sbjct: 553 RFDCHGCPFRFKDEGAFRSMLLKEQPNPLGKEHPPLRPSTSDIEEIVQDCKGQHYTRACY 612
Query: 417 LTFEAVHSS-SCDAGINHPNQYFSDSHKI 444
F A H D P +Y++ S ++
Sbjct: 613 KYFVATHPGVKRDTLFRSPFEYYTLSREV 641
>gi|71657135|ref|XP_817087.1| DNA primase large subunit [Trypanosoma cruzi strain CL Brener]
gi|70882257|gb|EAN95236.1| DNA primase large subunit, putative [Trypanosoma cruzi]
Length = 576
Score = 181 bits (460), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 120/389 (30%), Positives = 197/389 (50%), Gaps = 30/389 (7%)
Query: 86 NKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKR----ALMEEFDLPCK 141
++D+ISH + R +C +E RKWF+ E AL R R L ++ + +LM + LPC
Sbjct: 143 DEDLISHLLARFAFCMSEQWRKWFVKTEEALLRARLKLQMAKYETDFLPSLMRDNGLPCD 202
Query: 142 AISRTEFENA--KEKLEQVARSFDQPLPTADAIFYKVPFEEVPELVAGRRVYIHKGHAYV 199
+S ++++ +E + A + + ++ VP L+ R V KGHA +
Sbjct: 203 PLSDEQWQDPLLQEYIVYFAVFQGKQQSRSREDYFSVPMTLATRLIKTRSVLCLKGHAIL 262
Query: 200 AMHQVVSLVVTQFRSNLSKAL---ILTNRKWTSTIREQERDRLTPIVEALSMSYLGPDYS 256
Q + VT FRS L+K L L + TS ++ER+ + +++A ++ S
Sbjct: 263 HRDQAQEVFVTVFRSKLNKGLHEAYLARMRLTSNEEDEERETVMRMLDAFLEYFVSDPTS 322
Query: 257 QTKEF--GEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRME 314
+E G +S ++ ++A++ FPLCMR + + LR + HLKH GR GLFLK +GL ++
Sbjct: 323 AIQEAASGAVSAGEVRRIAQTHFPLCMRQVDEHLRREGHLKHHGRFTYGLFLKAIGLSLQ 382
Query: 315 DALAFWKAEFSQKVGA---ERFDKE-YAYSIRHNYGKEGKRTDYTPYSCQKIISSTPGVG 370
D++ + + + K A E F K Y Y+IRHNYG EGK+T Y+ SC +++ P V
Sbjct: 383 DSMTLFSSLMTVKGVAGNSEAFAKTAYGYNIRHNYGMEGKKTSYSSMSCATLLALPPVVD 442
Query: 371 --DHHGCPYRHFSEENLRAALGR------------MGVGSRAMEDVVDKVRNRHYQLACT 416
D HGCP+R E R+ L + + + +E++V + +HY AC
Sbjct: 443 RFDCHGCPFRFKDEGAFRSMLLKEQLNPLGKEHPPLRPSASDIEEIVQDCKGQHYTRACY 502
Query: 417 LTFEAVHSS-SCDAGINHPNQYFSDSHKI 444
F A H D P +Y++ S ++
Sbjct: 503 KYFVATHPGVKRDTLFRSPFEYYTLSREV 531
>gi|71424386|ref|XP_812782.1| DNA primase large subunit [Trypanosoma cruzi strain CL Brener]
gi|70877604|gb|EAN90931.1| DNA primase large subunit, putative [Trypanosoma cruzi]
Length = 576
Score = 181 bits (459), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 120/389 (30%), Positives = 197/389 (50%), Gaps = 30/389 (7%)
Query: 86 NKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKR----ALMEEFDLPCK 141
++D+ISH + R +C +E RKWF+ E AL R R L ++ + +LM + LPC
Sbjct: 143 DEDLISHLLARFAFCMSEQWRKWFVKTEEALLRARLKLQMAKYETDFLPSLMRDNGLPCD 202
Query: 142 AISRTEFENA--KEKLEQVARSFDQPLPTADAIFYKVPFEEVPELVAGRRVYIHKGHAYV 199
+S ++++ +E + A + + ++ VP L+ R V KGHA +
Sbjct: 203 PLSDEQWQDPLLQEYIVYFAVLQGKQQSRSREDYFSVPMTLATRLIKTRSVLCLKGHAIL 262
Query: 200 AMHQVVSLVVTQFRSNLSKAL---ILTNRKWTSTIREQERDRLTPIVEALSMSYLGPDYS 256
Q + VT FRS L+K L L + TS ++ER+ + +++A ++ S
Sbjct: 263 HRDQAQEVFVTVFRSKLNKGLHEAYLARMRLTSNEDDEERETVMRMLDAFLEYFVSDPTS 322
Query: 257 QTKEF--GEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRME 314
+E G +S ++ ++A++ FPLCMR + + LR + HLKH GR GLFLK +GL ++
Sbjct: 323 AIQEAASGAVSAGEVRRIAQTHFPLCMRQVDEHLRREGHLKHHGRFTYGLFLKAIGLSLQ 382
Query: 315 DALAFWKAEFSQKVGA---ERFDKE-YAYSIRHNYGKEGKRTDYTPYSCQKIISSTPGVG 370
D++ + + + K A E F K Y Y+IRHNYG EGK+T Y+ SC +++ P V
Sbjct: 383 DSMTLFSSLMTVKGVAGNSEAFAKTAYGYNIRHNYGMEGKKTSYSSMSCATLLALPPVVD 442
Query: 371 --DHHGCPYRHFSEENLRAALGR------------MGVGSRAMEDVVDKVRNRHYQLACT 416
D HGCP+R E R+ L + + + +E++V + +HY AC
Sbjct: 443 RFDCHGCPFRFKDEGAFRSMLLKEQLNPLGKEHPPLRPSASDIEEIVQDCKGQHYTRACY 502
Query: 417 LTFEAVHSS-SCDAGINHPNQYFSDSHKI 444
F A H D P +Y++ S ++
Sbjct: 503 KYFVATHPGVKRDTLFRSPFEYYTLSREV 531
>gi|428671893|gb|EKX72808.1| DNA primase large subunit, putative [Babesia equi]
Length = 534
Score = 181 bits (459), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 121/380 (31%), Positives = 194/380 (51%), Gaps = 32/380 (8%)
Query: 88 DIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKRAL-MEEFDLPCKAISRT 146
D+ISHF+L++ + ++ +W + E+ L+ R E R++ ++E D K S
Sbjct: 149 DVISHFLLKMAFSMDKERSEWLIRNESRLFDIRL-----ERLRSIKIQEVDGVDKLESFL 203
Query: 147 E-----FENAKEK------LEQVARSFDQPLP-TADAIF----YKVPF-EEVPELVAGRR 189
+ +EN K + + A+ F+ + D F Y VPF + +LV R
Sbjct: 204 QNQGIYYENIKNPTLNTRYMNKDAQEFNDLIKFRTDFAFINKLYVVPFYPDASQLVKARL 263
Query: 190 VYIHKGHAYVAMHQVVSLVVTQFRSNLSKAL-ILTNRKWTSTIREQERDRLTPIVEALSM 248
V I AYV + ++ T+F+ L ++L L+ + +RL+ ++ L
Sbjct: 264 VTIRDSIAYVPPSSLFIVISTRFKICLQQSLRFLSENSQILNTQVLSDERLSGFLKVLPE 323
Query: 249 SYLGPDYSQ--TKEFGEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFL 306
SYL DYS+ E +S+ +++Q+ + +FP CMR +F + + H+KH GR QL LFL
Sbjct: 324 SYLVTDYSKFNVTEENRLSLANINQIYKVTFPPCMRRIFSQYLKSGHMKHWGRQQLWLFL 383
Query: 307 KGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQKIISST 366
KG GL +E+++ + +S + F+KE+ Y+IRH YGKEG+R +Y PYSC +I+S
Sbjct: 384 KGAGLTLEESMNLNRTIWSD---SNNFEKEHGYNIRHLYGKEGRRANYPPYSCGRILSKL 440
Query: 367 PGV--GDHHGCPYRHFSEENLRAALGRMGVGSRAMEDVVDKVRNRHYQLACTLTFEAVHS 424
P G HGCP++ + L + L G+ S+ +VD YQLAC F
Sbjct: 441 PSNVGGSIHGCPFKELDNKGLYSLLQEFGLTSKQAAPIVDLKATHQYQLACVEYFNQTTP 500
Query: 425 SSCDAGI-NHPNQYFSDSHK 443
+ C GI HPN +F S K
Sbjct: 501 NGCADGIGTHPNIFFQASFK 520
>gi|407410361|gb|EKF32820.1| DNA primase large subunit, putative [Trypanosoma cruzi marinkellei]
Length = 576
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 124/394 (31%), Positives = 196/394 (49%), Gaps = 40/394 (10%)
Query: 86 NKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKR----ALMEEFDLPCK 141
++D+ISH + R +C +E RKWF+ E L R R L ++ + +LM + LPC
Sbjct: 143 DEDLISHLLSRFAFCMSEQWRKWFVKTEETLLRARLKLQMAKYETDFLPSLMRDNGLPCD 202
Query: 142 AISRTEFENAKEKLEQ-------VARSFDQPLPTADAIFYKVPFEEVPELVAGRRVYIHK 194
+S E +E L Q V + Q D ++ VP L+ R V K
Sbjct: 203 PLSD---EQWQEPLLQEYILYFAVLQGKQQSRNRED--YFSVPMTLATRLIKTRSVLCLK 257
Query: 195 GHAYVAMHQVVSLVVTQFRSNLSKAL---ILTNRKWTSTIREQERDRLTPIVEALSMSYL 251
GHA + Q + VT FRS L+K L L + TS ++ER+ + +++A ++
Sbjct: 258 GHAILHRDQAQEVFVTVFRSKLNKGLHEAYLARMRLTSNEDDEERESVMRMLDAFLEHFV 317
Query: 252 GPDYSQTKEF--GEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGV 309
S +E G +S+ ++ ++A++ FPLCMR + + LR + HLKH GR GLFLK +
Sbjct: 318 SDPTSAIQEAASGAVSVAEVRRIAQTHFPLCMRQVDEHLRREGHLKHHGRFTYGLFLKAI 377
Query: 310 GLRMEDALAFWKAEFSQKVGA---ERFDKE-YAYSIRHNYGKEGKRTDYTPYSCQKIISS 365
GL ++D++ + + + K A E F K Y Y+IRHNYG EGK+T Y+ SC +++
Sbjct: 378 GLSLQDSMTLFSSLMTVKGVAGNSEAFAKTAYGYNIRHNYGMEGKKTSYSSMSCATLLAL 437
Query: 366 TPGVG--DHHGCPYRHFSEENLRAALGR------------MGVGSRAMEDVVDKVRNRHY 411
P V D HGCP+R E R+ L + + + +E++V + +HY
Sbjct: 438 PPVVDRFDCHGCPFRFKDEGAFRSMLLKEQLNPLGKEHPPLRPSASDIEEIVQDCKGQHY 497
Query: 412 QLACTLTFEAVHSS-SCDAGINHPNQYFSDSHKI 444
AC F A H D P +Y++ S ++
Sbjct: 498 TRACYKYFVATHPGVKRDTLFRSPFEYYTLSREV 531
>gi|71747016|ref|XP_822563.1| DNA primase large subunit [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|70832231|gb|EAN77735.1| DNA primase large subunit, putative [Trypanosoma brucei brucei
strain 927/4 GUTat10.1]
gi|261332315|emb|CBH15309.1| DNA primase large subunit, putative [Trypanosoma brucei gambiense
DAL972]
Length = 577
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 125/393 (31%), Positives = 195/393 (49%), Gaps = 35/393 (8%)
Query: 86 NKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKR----ALMEEFDLPCK 141
++D++SH + R V+C +E RKWF+ E L R R L ++ + LM LPC
Sbjct: 143 DEDLLSHRLARFVFCMSEKWRKWFVRTEEMLLRARLRLQLAKCEADFLPNLMRLNGLPCD 202
Query: 142 AISRTEFENAKEK---LEQVARSFDQPLPTADAIFYKVPFEEVPELVAGRRVYIHKGHAY 198
A++ + ++ + + + A L AD F VP L+ R V +GHA
Sbjct: 203 ALTDDQQQDPRLQKYIIYHTAVQGKGQLRRADEYFL-VPLSLATRLIKARSVLCLRGHAI 261
Query: 199 VAMHQVVSLVVTQFRSNLSKAL---ILTNRKWTSTIREQERDRLTPIVEALSMSYLGPDY 255
+ QV + VT F S L+K L L K +S ER+ + +++A ++
Sbjct: 262 LHRDQVQEVFVTMFLSKLNKGLHEAYLARMKLSSHEDHDERETVMKMLDAFLEYFIEDTM 321
Query: 256 SQTKEF--GEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRM 313
++ +E G + D+ LA++ FPLCMR + + LR + HLKH GR GLFLK +GL M
Sbjct: 322 NEVQEASAGAVGAGDVRHLAQTHFPLCMRQVDEHLRREGHLKHQGRFTYGLFLKAIGLSM 381
Query: 314 EDALAFWKAEFSQKVGA------ERFDK-EYAYSIRHNYGKEGKRTDYTPYSCQKIISST 366
+D++ + + + K GA E F K Y Y+IRHNYG EGK+T Y+ SC ++
Sbjct: 382 QDSMVLFSSLMTLKAGAAGKGDPESFAKTSYGYNIRHNYGMEGKKTSYSSLSCTSLLGLP 441
Query: 367 PGVG--DHHGCPYRHFSEENLRAALGR-----MGVGSRA-------MEDVVDKVRNRHYQ 412
P V D HGCP+R +E R L + +G G + +ED++ + +HY
Sbjct: 442 PVVDKFDCHGCPFRFKNESAFRGVLLKEQLHPLGKGHSSIRLAASDIEDIIQDCKGQHYT 501
Query: 413 LACTLTFEAVHSSS-CDAGINHPNQYFSDSHKI 444
AC F A H + D P++Y+ S ++
Sbjct: 502 RACYKYFMATHPGARRDTLFRSPHEYYVTSREM 534
>gi|118381080|ref|XP_001023701.1| Eukaryotic-type DNA primase, large subunit family protein
[Tetrahymena thermophila]
gi|89305468|gb|EAS03456.1| Eukaryotic-type DNA primase, large subunit family protein
[Tetrahymena thermophila SB210]
Length = 517
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 116/381 (30%), Positives = 179/381 (46%), Gaps = 22/381 (5%)
Query: 87 KDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKRALMEEFDLPCKAISRT 146
K+++SHF+ ++ Y + W + L S + + +L K IS
Sbjct: 103 KEVLSHFLCKMAYAFYAEPETWLEFARAEAFILMDKLKSGQHHANFFSDENLKIKTISDE 162
Query: 147 EFENAKEKLEQVARSFD--------QPLPTADAIFYKVPFEEVPELVAGRRVYIHKGHAY 198
F+ A K+E S + + F F + P +++ V +HKG+
Sbjct: 163 LFKQAFPKIEATFSSIKIKKNDSEVEQINIKKDNFKMFKFIDHPSMLSNNDVVLHKGYII 222
Query: 199 VAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEALSMSYLGPDYSQT 258
+ +V F L + L K+ + + + DRL+ ++ L + + D +Q
Sbjct: 223 IYKESTSKIVQNIFIERLLDEMRLLQLKFQNNGSKLDDDRLS-FLKDLHKAEIFNDSTQF 281
Query: 259 KEFGEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALA 318
+I +LD+LA+ P CM +L L + HLKH GR+QLGLFLKG GL + +AL
Sbjct: 282 NS-TQIHHYELDRLAKRDMPACMTYLMYGLNQKLHLKHFGRLQLGLFLKGAGLSLNEALT 340
Query: 319 FWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQKIISSTPGVGDHHGCPYR 378
FW+ +FS K A+ F K+Y Y+IRHNYGK GK+ DYTP SCQKII P + HGCPY+
Sbjct: 341 FWQKKFS-KTSADDFKKKYDYNIRHNYGKLGKQLDYTPMSCQKIIGFQPLKDEFHGCPYK 399
Query: 379 HFSEENLRAALG-RMGVGSRAMEDVVDKVRNRHYQLACTLTFEAVHSSS----------C 427
+ L+ L + V + YQLAC F+ ++ +
Sbjct: 400 TMESQQLKDFLKLSYNITDEQFVQVNIFKNQKQYQLACKEVFKVLNDTRDKTKEQFYPYF 459
Query: 428 DAGINHPNQYFSDSHKILQPK 448
D NHPN YF S ++ +P+
Sbjct: 460 DKVGNHPNAYFEQSLRMHEPQ 480
>gi|358055462|dbj|GAA98582.1| hypothetical protein E5Q_05269 [Mixia osmundae IAM 14324]
Length = 481
Score = 172 bits (436), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 125/458 (27%), Positives = 213/458 (46%), Gaps = 38/458 (8%)
Query: 18 VSTLPLYRYAPQLEVRLEDFEVFAMDRLRVLKGIS-------DALARGKRPEEMENLVRD 70
++ L +Y P +V +E+ +A +R+ +L+ + D LA +R +
Sbjct: 29 LAQLSMYENWPDCDVDVEELLTWAKERVDILRELERCQAIRLDELATSQRVQHKLAQSDH 88
Query: 71 LWKANMRHPEASEDVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKR 130
L + R S D ISHFVLRL CR++ LR ++ +ETA +R R+ + E +
Sbjct: 89 LGSHDSRIANLS-----DEISHFVLRLALCRSDPLRDRYIGLETAYFRTRYASLNPEEQA 143
Query: 131 ALMEEFDLPCKAISRTEFENAKEKLEQVARSFDQPLPTADAI------------------ 172
+ L + + ++ +E + R+F A+
Sbjct: 144 RFHARYKLSWPSATD---DDKREHASAITRTFSTRWTEAEVAVLEQTQYARLIKGARKLD 200
Query: 173 FYKVPFEEVPELVAGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIR 232
K+ + +VP+LV RR I +G +V + V FR + +AL T R+ +S
Sbjct: 201 LLKLHWTDVPQLVGQRRAVITRGTTFVEAKHIPDFVALAFRRRMERALDTTARQISSFAD 260
Query: 233 EQERDRLTPIVEALSMSYLGPDYSQTKEFGEISIKDLDQLARSSFPLCMRHLFDKLREDH 292
+ E + +++ L M+ S+ ++ K +D +A FP CM +L +R +
Sbjct: 261 KPELTDMFRVIQRL-MAQEMSKISRLPTAVTLTAKTIDDVAPKHFPPCMLNLHTAMRRNK 319
Query: 293 HLKHGGRMQLGLFLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRT 352
L++ GR Q G FL+ L ++A F++ FS+ E K Y Y R+ +G EG
Sbjct: 320 LLRYYGRHQYGTFLRRATLDADEATTFFRKAFSKTSAIEWEQKRYKYEFRYIWGLEGAGH 379
Query: 353 DYTPYSCQKIISSTPGVGDHHGCPYRHFSEENLRAALGR-MGVGSRAMEDVVDKVRNRHY 411
+ SC+ I +P +HHGCP+ FS ++L L + M V ++ +++ R Y
Sbjct: 380 GFEAKSCKSCIDDSPSQHEHHGCPFATFSSDDLSRFLSKEMDVKGESVIEILRLKEARQY 439
Query: 412 QLACTLTFEAVHSSSC---DAGINHPNQYFSDSHKILQ 446
Q ACT FEA H+SS +A ++HPN+YF S + +Q
Sbjct: 440 QAACTRAFEAKHNSSWTGPEAIVDHPNRYFDLSLQTVQ 477
>gi|270011302|gb|EFA07750.1| hypothetical protein TcasGA2_TC005304 [Tribolium castaneum]
Length = 311
Score = 171 bits (433), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 96/271 (35%), Positives = 150/271 (55%), Gaps = 10/271 (3%)
Query: 173 FYKVPFEEVPELVAGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIR 232
+YK+ F EV ELV R ++ G+ ++ H+VV + + +L + + I
Sbjct: 32 WYKIYFTEVVELVKLRMYPMNDGYIFIPEHKVVFWFLQRLEKDLWNSFHHLRKIHPVCID 91
Query: 233 EQERDRLTPIVEALSMSYLGPDYSQTKEFGEISIKDLDQLARSSFPLCMRHLFDKLREDH 292
E RL I+ L++ + P+ FG++ ++ L + ++ FPLCM+ ++ L+++H
Sbjct: 92 E----RLKTIISLLNL--VRPN-EYNFNFGKLELEQLREKWKN-FPLCMKIQYENLQKNH 143
Query: 293 HLKHGGRMQLGLFLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRT 352
HLKH R QLGLFLKG+GL + +AL WK+EF + + E+F KE+ Y +H YG G +
Sbjct: 144 HLKHFSRFQLGLFLKGIGLSLTNALELWKSEFIKIMSEEQFIKEHVYYFKHLYGVVGAKI 203
Query: 353 DYTPYSCQKIISSTPGVGDHHGCPYRHFSEENLRAALGRMGVGSRAMEDVVDKVRNRHYQ 412
+Y PY+C+KI S G G HGCP++H L A L + V + +E ++ + + Y
Sbjct: 204 NYRPYNCEKIQSQGVGHGQIHGCPFKHSDNHMLAARLAKDSVSNDEIEFILALKKEKDYN 263
Query: 413 LACTLTFEAVHSSSC--DAGINHPNQYFSDS 441
ACT E VHS D INHPN YF +
Sbjct: 264 KACTRYLECVHSCQIGEDTVINHPNDYFEKA 294
>gi|85000785|ref|XP_955111.1| DNA primase large subunit [Theileria annulata strain Ankara]
gi|65303257|emb|CAI75635.1| DNA primase large subunit, putative [Theileria annulata]
Length = 510
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 140/487 (28%), Positives = 219/487 (44%), Gaps = 102/487 (20%)
Query: 31 EVRLEDFEVFAMDRLRVLKGI---SDALARGKRPEEMENLVRD-------------LWKA 74
E+ L F+ A RL +L+ I S+ + + +E E L D + +
Sbjct: 37 EIDLRSFQEIAAKRLALLQYIDMRSELKIKSHKSKEFEPLKYDQKTMERMNEIEDKILEF 96
Query: 75 NMRHPE---ASEDVN-------KDIISHFVLRLVYC-------RTEDLRKWFLSMETALY 117
++ P+ + E++N +D+ISHF+LR+ Y R +D WF+ E L+
Sbjct: 97 DLMLPKVLYSKEELNEFIHIAQRDVISHFILRMAYILHIIYTNRDKDKTDWFIKNECKLF 156
Query: 118 RYR--------------------FLLGS------------SEAKRALMEEFDLPCKAISR 145
R FL ++ + E D R
Sbjct: 157 DIRLERLRSVKVQEVDGVDKLESFLHNQGIKYPTVKNPAITKGRHMTKELIDFTDLIRFR 216
Query: 146 TEFENAKEKLEQVARSFDQPLPTADAIFYKVPF-EEVPELVAGRRVYIHKGHAYVAMHQV 204
++F N+ +KL QV + I VPF + +LV R V I AYV + +
Sbjct: 217 SDF-NSIDKLYQVIHT----------IITLVPFYPDANQLVRMRLVSIKNSVAYVPPNSL 265
Query: 205 VSLVVTQFRSNLSKALILTNRKWT---STIREQERDRLTPIVEALSMSYLGPDYSQTK-- 259
++ T+FR+ L +++ N + S I ER L ++ L SYL DYS+
Sbjct: 266 FIVISTKFRNELQQSMKYLNENQSMLDSIILNDER--LCDFMKVLPESYLANDYSKITFT 323
Query: 260 EFGEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAF 319
+ +++ +++Q+ + +FP CMR +F L ++HHLKH GR QL LFLKG+ +
Sbjct: 324 DDTRLTLSNINQVYKFTFPPCMRRMFSHLLKNHHLKHEGRQQLWLFLKGLWIN------- 376
Query: 320 WKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQKIISSTPG--VGDHHGCPY 377
G K +AY+IRH YGKEGKRT Y PYSC ++I ++P G HGCP+
Sbjct: 377 --------YGRITTIKSHAYNIRHLYGKEGKRTSYPPYSCTRMIKNSPPNVAGTAHGCPF 428
Query: 378 RHFSEENLRAALGRMGVGSRAMEDVVDKVRNRHYQLACTLTFEAVHSSSCDAGI-NHPNQ 436
+ ++L L G+ S +E ++D + +QLAC F +SC GI PN
Sbjct: 429 KELDPKSLYQLLQEFGLNSTQIEPIIDLKSSYQFQLACVEYFNQTTPNSCADGIGTSPNT 488
Query: 437 YFSDSHK 443
+F S K
Sbjct: 489 FFHSSFK 495
>gi|307205344|gb|EFN83692.1| DNA primase large subunit [Harpegnathos saltator]
Length = 428
Score = 168 bits (425), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 77/180 (42%), Positives = 107/180 (59%)
Query: 264 ISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWKAE 323
+S+ LD+L+ SS+P CMR L LR++HHL HGGR+Q GLFLKG+G+ + DA+ FWK+E
Sbjct: 203 VSLDQLDELSGSSYPCCMRVLHKALRKNHHLTHGGRIQYGLFLKGIGISLSDAMTFWKSE 262
Query: 324 FSQKVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQKIISSTPGVGDHHGCPYRHFSEE 383
F + F+KE+ Y IR +G EG R DY PY C KI+ ST G D+HGCP++H +
Sbjct: 263 FINIMDEAAFEKEHTYQIRFIFGWEGTRRDYQPYKCSKIMESTVGPRDYHGCPFKHMPRD 322
Query: 384 NLRAALGRMGVGSRAMEDVVDKVRNRHYQLACTLTFEAVHSSSCDAGINHPNQYFSDSHK 443
L L G + +++ +N Y AC +E H D HPN YF++ K
Sbjct: 323 VLEDELVNCGFNALERSAIMNLSQNGQYSAACNKYYEIKHGCFNDIPFKHPNIYFNECVK 382
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 57/135 (42%), Gaps = 17/135 (12%)
Query: 21 LPLYRYAPQLEVRLEDFEVFAMDRLRVLKGI----------SDALARGKRPEEMENLVRD 70
L LY+ AP E+ L++ + + RL+VL + S + R EE+ D
Sbjct: 22 LQLYQNAPFGEIMLDELQEISETRLKVLTLVERIHFQKLLMSVSKRRAALVEELYKQGLD 81
Query: 71 LWKANMRHPEASEDVNKDI-------ISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLL 123
+ + P + DI +SH +LR V ++WF E L+++RF
Sbjct: 82 EFARLINSPGCKSHTDMDIHIRRKDHMSHVILRSVVAFNTVKKRWFFKQEARLFKWRFSS 141
Query: 124 GSSEAKRALMEEFDL 138
+E R M+ ++
Sbjct: 142 LDNEGIRCFMQIYNF 156
>gi|441601123|ref|XP_003281448.2| PREDICTED: DNA primase large subunit-like [Nomascus leucogenys]
Length = 192
Score = 167 bits (424), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 80/145 (55%), Positives = 103/145 (71%), Gaps = 2/145 (1%)
Query: 247 SMSYLGPDYSQTKEFGEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFL 306
S SY G DYS G+IS+ +D L+ SF C+ L LRE+HHL+HGGRMQ GLF+
Sbjct: 14 SHSYTGQDYSTQGNVGKISLDQIDSLSTKSFLPCVSQLHKALRENHHLRHGGRMQYGLFM 73
Query: 307 KGVGLRMEDALAFWKAEFSQ-KVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQKII-S 364
KG+ L +E AL FWK EF + K+ ++FDK Y+Y+IRH++GKEGKRTDYTP+SC KII S
Sbjct: 74 KGIDLTLEQALQFWKQEFIKGKMDPDKFDKGYSYNIRHSFGKEGKRTDYTPFSCLKIILS 133
Query: 365 STPGVGDHHGCPYRHFSEENLRAAL 389
+ P GD+HGCP+RH E L+ L
Sbjct: 134 NPPSQGDYHGCPFRHSDPELLKQKL 158
>gi|389600085|ref|XP_001561600.2| putative DNA primase large subunit [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|322504176|emb|CAM36746.2| putative DNA primase large subunit [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 567
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 118/396 (29%), Positives = 177/396 (44%), Gaps = 31/396 (7%)
Query: 87 KDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKRA----LMEEFDLPCKA 142
+D+ SH + R +C +E R W + E L R + ++ LM+ LPC
Sbjct: 144 EDVTSHLLCRFAFCMSERWRDWLVRTERVLLMARIKMEVAKNPLTFLVDLMKHNGLPCAP 203
Query: 143 ISRTEFENA--KEKLEQVARSFDQPLPTADAI--FYKVPFEEVPELVAGRRVYIHKGHAY 198
+S + + +E LE D + +Y VP L+ R V G A
Sbjct: 204 LSDVQLADPLLQEYLEYRRVKADSARESEGRAENYYAVPLSLATRLIKKRHVLCRAGQAI 263
Query: 199 VAMHQVVSLVVTQFRSNLSKAL---ILTNRKWTSTIREQERDRLTPIVEALSMSYLGP-- 253
+ QV + + F + L++ L L K + E + + +++A ++
Sbjct: 264 LFRDQVQEVFLAVFCARLNRGLHSAYLARVKQQALEEETAKSTVMAMLDAFLQQFVSDPV 323
Query: 254 DYSQTKEFGEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRM 313
D Q G + D+ QLA++ FP CMR + LR + HLKH GR GLFLK +GL +
Sbjct: 324 DSLQEGVAGTVRAGDVQQLAQTHFPPCMRAVDSHLRREGHLKHHGRFTYGLFLKAIGLSL 383
Query: 314 EDALAFWKAEFSQKVGA--ERFDK-EYAYSIRHNYGKEGKRTDYTPYSCQKIISSTPGVG 370
ED+L + K G E F K Y Y++RHNYG EGK+T Y+ SC I+ P V
Sbjct: 384 EDSLELFATLMKVKGGGSVEAFSKTAYGYNVRHNYGMEGKKTSYSSASCATILGLPPVVD 443
Query: 371 DH--HGCPYRHFSEENLRAALGRMGVGSRA------------MEDVVDKVRNRHYQLACT 416
H HGCP+R E LR LG+ + +ED+V +++HY AC
Sbjct: 444 QHDCHGCPFRFRDEGALRTMLGKETPNPKGRTYPSVRPAPGDIEDIVSDCKSQHYTRACY 503
Query: 417 LTFEAVHSSS-CDAGINHPNQYFSDSHKILQPKNNN 451
F A+H + D P +YFS S + P +
Sbjct: 504 KYFMAIHPDARRDTLFRSPYEYFSVSLEFETPSDGT 539
>gi|403223035|dbj|BAM41166.1| DNA primase large subunit [Theileria orientalis strain Shintoku]
Length = 489
Score = 165 bits (417), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 113/382 (29%), Positives = 175/382 (45%), Gaps = 63/382 (16%)
Query: 88 DIISHFVLRLVYCRTEDLRKWFLSMETALYRYRF-------------------LLGSSEA 128
D++SHF+LRL +CR + +WF+ E L+ R L +
Sbjct: 120 DVVSHFILRLAFCRDRERSEWFIKNECKLFDIRLERLRSVKIQEVDGVDKLETFLANQGV 179
Query: 129 KRALMEEFDLPCKAISR--TEFENAKEKLEQVARSFDQPLPTADAIFYKVPFEEVPELVA 186
K ++ +L S+ TEF + + F T D ++ + + A
Sbjct: 180 KYDTIKNPNLTGNYTSKEATEFNDMVK--------FRTDFNTIDKVYLVSIRIQSKSIGA 231
Query: 187 GRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEAL 246
+ G ++ + VSL + + +++L+ +N + ER L+ ++ L
Sbjct: 232 ILSRCLSAGEDETSIAKRVSLQQSIRFLSENQSLLESN------VFSDER--LSGFLKLL 283
Query: 247 SMSYLGPDYSQTKEFGE--ISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGL 304
+YLG DYS+ E +S+ +++Q+ + +FP CMR LF HHLKH GR QL L
Sbjct: 284 PGAYLGNDYSKFNYSDENRLSLSNINQIYKLTFPPCMRRLFSNYLRTHHLKHWGRQQLWL 343
Query: 305 FLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQKIIS 364
F KG G+ +E E+AY+IRH YGKEG+R +Y PYSC KII+
Sbjct: 344 FFKGAGMTLE---------------------EHAYNIRHMYGKEGRRANYPPYSCSKIIN 382
Query: 365 STPG--VGDHHGCPYRHFSEENLRAALGRMGVGSRAMEDVVDKVRNRHYQLACTLTFEAV 422
+ PG G HGCP++ +NL L G+ M+ ++D YQLAC F
Sbjct: 383 TLPGNVAGSVHGCPFKELDAKNLYTLLKEFGLQPNQMDPIIDIKNTHQYQLACVEYFNQT 442
Query: 423 HSSSCDAGI-NHPNQYFSDSHK 443
+ C G+ HPN +F S K
Sbjct: 443 TPNGCADGVGTHPNIFFQASFK 464
>gi|156083823|ref|XP_001609395.1| DNA primase, large subunit [Babesia bovis T2Bo]
gi|154796646|gb|EDO05827.1| DNA primase, large subunit [Babesia bovis]
Length = 520
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 115/406 (28%), Positives = 179/406 (44%), Gaps = 53/406 (13%)
Query: 83 EDVNK-------DIISHFVLRL-VYC-----------------------------RTEDL 105
EDV K D+ISHF+LRL + C R D
Sbjct: 111 EDVEKYLHIAQADVISHFILRLAIICVLYHAIDVLYYGFGSAVFHQIWSFIYRFGRARDK 170
Query: 106 RKWFLSMETALYRYRFLLGSSEAKRALMEEFDLPCKAISRTEFENAKEKLEQVARSFDQP 165
R WFL E L+ R + K + + +P + ++++++ + F
Sbjct: 171 RDWFLRNEVRLFEIRL----EKLKNVKIRDMVVPTMMTHSNQMAEQMKQIQELIQ-FRND 225
Query: 166 LPTADAIFYKVPFEEVPELVAGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNR 225
+ ++ + + LV R+V + G AYV + L ++FR + +L +
Sbjct: 226 ASKVEKLYIAPFYPDAMVLVRNRQVALKNGQAYVPNTLLHILCSSKFRQQVQNSLRSLDE 285
Query: 226 KWTSTIREQERD-RLTPIVEALSMSYLGPDYSQTK----EFGEISIKDLDQLARSSFPLC 280
T + D R++ + L SYL DYS++ E +++ +++ + R +FP C
Sbjct: 286 AGTIDAAKPFVDERISGFLRVLPESYLATDYSRSNYVPGENESLNLANVNSIFRQTFPPC 345
Query: 281 MRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYS 340
MR +F HLKH R Q LFLKG G+ +E+ + F + + A FDKE+ Y+
Sbjct: 346 MRRIFTHYVNSRHLKHNARRQFWLFLKGCGMSLEENIHFNRNIWHD---ATSFDKEHVYN 402
Query: 341 IRHNYGKEGKRTDYTPYSCQKIISSTPGV--GDHHGCPYRHFSEENLRAALGRMGVGSRA 398
IRH YGKEG+R Y P SC II S P G HGCP++ +R L G+G
Sbjct: 403 IRHIYGKEGRRLSYPPLSCNAIIKSLPPPVQGQVHGCPFKELDNNGVRKMLEDFGLGDDQ 462
Query: 399 MEDVVDKVRNRHYQLACTLTFEAVHSSSCDAGIN-HPNQYFSDSHK 443
+ ++D YQLAC F + G+ HPN +F +S K
Sbjct: 463 ITPIMDLKATHQYQLACVEYFAQNTPNGATEGVGIHPNVFFQNSFK 508
>gi|159487154|ref|XP_001701600.1| predicted protein [Chlamydomonas reinhardtii]
gi|158271541|gb|EDO97358.1| predicted protein [Chlamydomonas reinhardtii]
Length = 136
Score = 160 bits (406), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 74/136 (54%), Positives = 93/136 (68%), Gaps = 1/136 (0%)
Query: 304 LFLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQKII 363
L +G+GL ME+AL FW++ F+ + E FDK+YAY+IRHNYG+EGKRTDYT + C I+
Sbjct: 1 LHPQGIGLPMEEALVFWRSMFAPRCTGEAFDKQYAYNIRHNYGREGKRTDYTAHKCTTIV 60
Query: 364 SSTPGVGDHHGCPYRHFSEENLRAALGRMGVGSRAMEDVVDKVRNRHYQLACTLTFEAVH 423
S+ G GDHHGCPYR E LRAALGR+ R +E+ V K R+ HYQLAC FE VH
Sbjct: 61 GSSGGPGDHHGCPYRRLDESALRAALGRLKCDDRKVEEAVSKARDGHYQLACAAAFEGVH 120
Query: 424 S-SSCDAGINHPNQYF 438
D GI+ P QY+
Sbjct: 121 RVPEMDVGISAPLQYY 136
>gi|401414365|ref|XP_003871680.1| putative DNA primase large subunit [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322487899|emb|CBZ23143.1| putative DNA primase large subunit [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 536
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 117/387 (30%), Positives = 176/387 (45%), Gaps = 33/387 (8%)
Query: 87 KDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKRA----LMEEFDLPCKA 142
+D+ SH + R +C +E R W + E L R + ++ LM+ LPC
Sbjct: 113 EDVTSHLLCRFAFCMSERWRDWLVRTERVLLTARIKMEMAKKPFTFLVDLMKRNGLPCAP 172
Query: 143 ISRTEFENA--KEKLEQ---VARSFDQPLPTADAIFYKVPFEEVPELVAGRRVYIHKGHA 197
++ + + +E LE A S + A+ +Y VP L+ R V G A
Sbjct: 173 LTDKQLADPMLQEYLEYRRVKAESARESEGRAEN-YYAVPLSLATRLIKKRYVLCRAGQA 231
Query: 198 YVAMHQVVSLVVTQFRSNLSKAL---ILTNRKWTSTIREQERDRLTPIVEALSMSYLGP- 253
+ QV + +T F + L++ L L K + E + + +++A ++
Sbjct: 232 ILFRDQVQEVFLTVFCARLNRGLHNAYLARVKQQALEEETTKSTVMAMLDAFLQQFISAP 291
Query: 254 -DYSQTKEFGEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLR 312
D Q G + D+ +LA++ FP CMR + LR + HLKH GR GLFLK +GL
Sbjct: 292 VDTLQEGVAGSVRAGDVQRLAQAHFPPCMRAIDSHLRREGHLKHHGRFTYGLFLKSIGLS 351
Query: 313 MEDALAFWKAEFSQKVGA--ERFDKE-YAYSIRHNYGKEGKRTDYTPYSCQKIISSTPGV 369
+ED+L + K G E F K Y Y++RHNYG EGK+ YT SC I++ P V
Sbjct: 352 LEDSLELFATLMKVKGGGSVEPFAKTAYGYNVRHNYGMEGKKMSYTSASCASILALPPVV 411
Query: 370 GDH--HGCPYRHFSEENLRAALGRMGVGSRA------------MEDVVDKVRNRHYQLAC 415
H HGCP+R E LR LG+ + +ED+V + +HY AC
Sbjct: 412 DQHDCHGCPFRFRDEGALRTMLGKEAQNPKGCNYPSVRPTSGDIEDIVSDSKAQHYTRAC 471
Query: 416 TLTFEAVHSSS-CDAGINHPNQYFSDS 441
F A H + D P +Y+S S
Sbjct: 472 YKYFMATHPGARRDTLFRSPYEYYSVS 498
>gi|123396281|ref|XP_001300881.1| Eukaryotic-type DNA primase, large subunit family protein
[Trichomonas vaginalis G3]
gi|121881988|gb|EAX87951.1| Eukaryotic-type DNA primase, large subunit family protein
[Trichomonas vaginalis G3]
Length = 457
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 103/360 (28%), Positives = 182/360 (50%), Gaps = 22/360 (6%)
Query: 88 DIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKRALMEEFDLPCKAISRTE 147
D +S + ++ RT++ + F+ +E+ +++ R + + L EE P K
Sbjct: 103 DEMSFYAFMVISLRTDETQHKFVKVESEIFKARIRYALDQHAK-LHEEDGQPFK------ 155
Query: 148 FENAKEKLEQVARSFDQPLPTADAIFYKVPFEEVPELVAGRRVYIHKGHAYVAMHQVVSL 207
F ++ + DQ + Y +PFE V E + + G V+ ++ S
Sbjct: 156 FPQELLEIPHPKLNLDQHYNRKTKM-YTIPFELVFEFINVYTCRLSDGFVEVSPKELDSF 214
Query: 208 VVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEALSMSYLGPDYSQTKE-FGEISI 266
++ L K + R + I + LT I +L G +++++ F +++
Sbjct: 215 FTKLYQIYLEKRIA---RYRAAKIHSSD---LTKIAISLFDERAGSFVAKSRQNFSRVTL 268
Query: 267 KDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWKAEFSQ 326
+D+D + RS FP CMR ++D L+++H L H GR+Q GL+LKG+GL M+++L FW++EF++
Sbjct: 269 QDMDAVIRS-FPPCMRSMYDALKKNHKLFHSGRLQFGLYLKGIGLTMDESLKFWRSEFTK 327
Query: 327 KVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQKII-SSTPGVGDHHGCPYRHFSEENL 385
+ + F+K YAY+IRH YGKEG + + YSC I+ P G HGCP++ L
Sbjct: 328 AISLDDFEKHYAYNIRHTYGKEGAGKNLSAYSCAGILRQPAPASGQTHGCPFKMMQMPQL 387
Query: 386 RAALGRMG--VGSRAMEDVVDKVRNRHYQLACTLTFEAVHSSS--CDAGINHPNQYFSDS 441
A + + + + M ++ K R AC + F ++H + G+ HPN YF++S
Sbjct: 388 EALIKEINPEIAGKYMAEINAKARENPGS-ACAILFNSLHPDHELDETGVFHPNVYFNES 446
>gi|389592492|ref|XP_003721687.1| putative DNA primase large subunit [Leishmania major strain
Friedlin]
gi|321438220|emb|CBZ11972.1| putative DNA primase large subunit [Leishmania major strain
Friedlin]
Length = 567
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 117/398 (29%), Positives = 178/398 (44%), Gaps = 35/398 (8%)
Query: 87 KDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKRA------LMEEFDLPC 140
+D+ SH + R +C +E R W + E L R + AKR LM+ LPC
Sbjct: 144 EDVTSHLLCRFAFCMSERWRDWLVRTERVLLTARIKM--EMAKRPFTFLVDLMKRNGLPC 201
Query: 141 KAISRTEFENA--KEKLEQVARSFDQPLPTADAI--FYKVPFEEVPELVAGRRVYIHKGH 196
++ + + +E LE + + + +Y VP L+ R V G
Sbjct: 202 APLTDKQLADPMLQEYLEYRRVKAESARESEGRVENYYAVPLSLATRLIKKRYVLCRAGQ 261
Query: 197 AYVAMHQVVSLVVTQFRSNLSKAL---ILTNRKWTSTIREQERDRLTPIVEALSMSYLGP 253
A + QV + +T F + L++ L L K + E + + +++A ++
Sbjct: 262 AILFRDQVQEVFLTVFCARLNRGLHNAYLARVKQQALEEETAKSTVMAMLDAFLQQFISD 321
Query: 254 --DYSQTKEFGEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGL 311
D Q G + +D+ +LA++ FP CMR + LR + HLKH GR GLFLK +GL
Sbjct: 322 PVDTLQEGVAGSVRARDVQRLAQAHFPPCMRAIDWHLRREGHLKHHGRFMYGLFLKSIGL 381
Query: 312 RMEDALAFWKAEFSQKVGA--ERFDKE-YAYSIRHNYGKEGKRTDYTPYSCQKIISSTPG 368
+ED+L + K G E F K Y Y++RHNYG EGK+ Y+ SC I+ P
Sbjct: 382 SLEDSLELFATLMKVKGGGSVEAFAKTAYGYNVRHNYGMEGKKMSYSSASCATILGLPPV 441
Query: 369 VGDH--HGCPYRHFSEENLRAALGRMGVGSRA------------MEDVVDKVRNRHYQLA 414
V H HGCP+R E LR LG+ + +ED+V + +HY A
Sbjct: 442 VDQHDCHGCPFRFRDEGALRTMLGKETENPKGCDYPSVRPTPGDIEDIVSDSKAQHYTRA 501
Query: 415 CTLTFEAVHSSS-CDAGINHPNQYFSDSHKILQPKNNN 451
C F A H + D P +Y+S S + P +
Sbjct: 502 CYKYFMATHPGARRDTLFRSPYEYYSVSLEFETPSDGT 539
>gi|145492664|ref|XP_001432329.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124399440|emb|CAK64932.1| unnamed protein product [Paramecium tetraurelia]
Length = 493
Score = 158 bits (399), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 100/365 (27%), Positives = 171/365 (46%), Gaps = 43/365 (11%)
Query: 88 DIISHFVLRLVYCRTEDLRKWFLSMETALYR-------------------YRFLLGSSEA 128
D +HF L L Y +++ F+ + L++ Y+ LLG +E
Sbjct: 92 DNAAHFFLELAYSESDEKINEFIKYQKHLFQIRCEAQLENEQTNERLLKIYKKLLGDNEI 151
Query: 129 KRALMEEFD--------LPCKAISRTEFEN------AKEKLEQVARSFDQPLPTADAIFY 174
+ +E+D LP + + N K +L R+F+ F+
Sbjct: 152 TKISKQEWDEDIPKQLRLPNQVDQSNKLGNYVILGTGKSQL----RNFNNV--NTYLKFF 205
Query: 175 KVPFEEVPELVAGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQ 234
K PF V V+ Y+ G AY+ ++ + ++ F L K + K+
Sbjct: 206 KTPFYNVLHSVSSIHTYLKNGFAYIYEDELKNCLLDVFLGKLRKRMQANQIKFQYE-ELM 264
Query: 235 ERDRLTPIVEALSMSYLGPDYSQTKEFGEISIKDLD--QLARSSFPLCMRHLFDKLREDH 292
+ D + + + + + G + + F + S+ L Q ++ FPLCM +L D+L +H
Sbjct: 265 KNDEIVRMFKKIQQTDSGMLSQKLQNFEQDSLNALTVRQQSKDHFPLCMEYLIDRLEVNH 324
Query: 293 HLKHGGRMQLGLFLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRT 352
HLKH GR Q+ LF K G+++ + + + K +F QK+ + F+K Y Y+IRHNYG EGKR
Sbjct: 325 HLKHNGRQQIQLFFKSAGMKINETIKYMKMQFQQKISEQDFNKNYLYNIRHNYGLEGKRE 384
Query: 353 DYTPYSCQ-KIISSTPGVGDHHGCPYRHFSEENLRAALGRMGVGSRAMEDVVDKVRNRHY 411
+Y YSC ++ PG ++HGCP ++F+ + L L ++ V++ + H+
Sbjct: 385 NYQCYSCSYNMVKQNPGNDEYHGCPIKNFNSDVLEKYLKSKSYEETDIKKVIELKKGNHF 444
Query: 412 QLACT 416
QLACT
Sbjct: 445 QLACT 449
>gi|398009550|ref|XP_003857974.1| DNA primase large subunit, putative [Leishmania donovani]
gi|322496178|emb|CBZ31249.1| DNA primase large subunit, putative [Leishmania donovani]
Length = 567
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 119/399 (29%), Positives = 179/399 (44%), Gaps = 37/399 (9%)
Query: 87 KDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKRA------LMEEFDLPC 140
+D+ SH + R +C +E R W + E L R + AKR LM+ LPC
Sbjct: 144 EDVTSHLLCRFAFCMSEHWRDWLVRTERVLLTARIKM--EMAKRPFTFLVDLMKRNGLPC 201
Query: 141 KAISRTEFENA--KEKLEQ---VARSFDQPLPTADAIFYKVPFEEVPELVAGRRVYIHKG 195
++ + + +E LE A S + A+ +Y VP L+ R V G
Sbjct: 202 APLTDKQLADPMLQEYLEYRRVKAESARESEGRAEN-YYAVPLSLATRLIKKRYVLCRAG 260
Query: 196 HAYVAMHQVVSLVVTQFRSNLSKAL---ILTNRKWTSTIREQERDRLTPIVEALSMSYLG 252
+ QV + +T F + L++ L L K + E + + +++A ++
Sbjct: 261 QTILFRDQVQEVFLTVFCARLNRGLHNAYLARVKQQALEEETTKSTVMAMLDAFLQQFIS 320
Query: 253 P--DYSQTKEFGEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVG 310
D Q G + D+ +LA++ FP CMR + LR + HLKH GR GLFLK +G
Sbjct: 321 DPVDTLQEGVAGSVKAGDVQRLAQAHFPPCMRAIDWHLRREGHLKHHGRFMYGLFLKSIG 380
Query: 311 LRMEDALAFWKAEFSQKVGA--ERFDKE-YAYSIRHNYGKEGKRTDYTPYSCQKIISSTP 367
L +ED+L + K G E F K Y Y++RHNYG EGK+ Y+ SC I+ P
Sbjct: 381 LSLEDSLELFATLMKVKGGGSVEAFAKTAYGYNVRHNYGMEGKKMSYSSASCATILGLPP 440
Query: 368 GVGDH--HGCPYRHFSEENLRAALGRMGVGSRA------------MEDVVDKVRNRHYQL 413
V H HGCP+R E LR LG+ + +ED+V + +HY
Sbjct: 441 VVDQHDCHGCPFRFRDEGALRTMLGKETQNPKGCNYPSVRPTPGDIEDIVSDSKAQHYTR 500
Query: 414 ACTLTFEAVHSSS-CDAGINHPNQYFSDSHKILQPKNNN 451
AC F A H + D P +Y+S S + P ++
Sbjct: 501 ACYKYFMATHPGARRDTLFRSPYEYYSVSLEFETPSDST 539
>gi|339896763|ref|XP_003392180.1| putative DNA primase large subunit [Leishmania infantum JPCM5]
gi|321398861|emb|CBZ08312.1| putative DNA primase large subunit [Leishmania infantum JPCM5]
Length = 567
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 119/399 (29%), Positives = 179/399 (44%), Gaps = 37/399 (9%)
Query: 87 KDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKRA------LMEEFDLPC 140
+D+ SH + R +C +E R W + E L R + AKR LM+ LPC
Sbjct: 144 EDVTSHLLCRFAFCMSERWRDWLVRTERVLLTARIKM--EMAKRPVTFLVDLMKRNGLPC 201
Query: 141 KAISRTEFENA--KEKLEQ---VARSFDQPLPTADAIFYKVPFEEVPELVAGRRVYIHKG 195
++ + + +E LE A S + A+ +Y VP L+ R V G
Sbjct: 202 APLTDKQLADPMLQEYLEYRRVKAESARESEGRAEN-YYAVPLSLATRLIKKRYVLCRAG 260
Query: 196 HAYVAMHQVVSLVVTQFRSNLSKAL---ILTNRKWTSTIREQERDRLTPIVEALSMSYLG 252
+ QV + +T F + L++ L L K + E + + +++A ++
Sbjct: 261 QTILFRDQVQEVFLTVFCARLNRGLHNAYLARVKQQALEEETTKSTVMAMLDAFLQQFIS 320
Query: 253 P--DYSQTKEFGEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVG 310
D Q G + D+ +LA++ FP CMR + LR + HLKH GR GLFLK +G
Sbjct: 321 DPVDTLQEGVAGSVKAGDVQRLAQAHFPPCMRAIDWHLRREGHLKHHGRFMYGLFLKSIG 380
Query: 311 LRMEDALAFWKAEFSQKVGA--ERFDKE-YAYSIRHNYGKEGKRTDYTPYSCQKIISSTP 367
L +ED+L + K G E F K Y Y++RHNYG EGK+ Y+ SC I+ P
Sbjct: 381 LSLEDSLELFATLMKVKGGGSVEAFAKTAYGYNVRHNYGMEGKKMSYSSASCATILGLPP 440
Query: 368 GVGDH--HGCPYRHFSEENLRAALGRMGVGSRA------------MEDVVDKVRNRHYQL 413
V H HGCP+R E LR LG+ + +ED+V + +HY
Sbjct: 441 VVDQHDCHGCPFRFRDEGALRTMLGKETQNPKGCNYPSVRPTPGDIEDIVSDSKAQHYTR 500
Query: 414 ACTLTFEAVHSSS-CDAGINHPNQYFSDSHKILQPKNNN 451
AC F A H + D P +Y+S S + P ++
Sbjct: 501 ACYKYFMATHPGARRDTLFRSPYEYYSVSLEFETPSDST 539
>gi|294979782|pdb|3LGB|A Chain A, Crystal Structure Of The Fe-S Domain Of The Yeast Dna
Primase
gi|294979783|pdb|3LGB|B Chain B, Crystal Structure Of The Fe-S Domain Of The Yeast Dna
Primase
Length = 194
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 76/178 (42%), Positives = 108/178 (60%), Gaps = 9/178 (5%)
Query: 275 SSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWKAEFSQKVGAERFD 334
S++PLC+++L + L+++HHL++ GR QL LFLKG+GL ++AL FW F+ E+F+
Sbjct: 16 SNYPLCIKNLXEGLKKNHHLRYYGRQQLSLFLKGIGLSADEALKFWSEAFTNXT-XEKFN 74
Query: 335 KEYAYSIRHNYGKEGKRTDYTPYSCQKIISST-PGVGDHHGCPYRHFSEENLRAALGRMG 393
KEY YS RHNYG EG R +Y P+ C I+S PG GD+HGCP+R +S E L A L
Sbjct: 75 KEYRYSFRHNYGLEGNRINYKPWDCHTILSKPRPGRGDYHGCPFRDWSHERLSAELRSXK 134
Query: 394 VGSRAMEDVVDKVRNRHYQLACTLTFEAVHSSSC-------DAGINHPNQYFSDSHKI 444
+ + V+D + Y +ACT FE H+S+ I HPN YF S ++
Sbjct: 135 LTQAQIISVLDSCQKGEYTIACTKVFEXTHNSASADLEIGEQTHIAHPNLYFERSRQL 192
>gi|449017222|dbj|BAM80624.1| DNA primase, large subunit [Cyanidioschyzon merolae strain 10D]
Length = 552
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 113/400 (28%), Positives = 183/400 (45%), Gaps = 48/400 (12%)
Query: 34 LEDFEVFAMDRLRVLKGISDALARGKRPEEMENLVRDLWKANMRHPEASEDVNKDIISHF 93
L + + + RL +L+ +SD+ P E E + + ++ D SHF
Sbjct: 42 LRELLGWGLQRLALLQELSDS---ELEPAEAEAQIERMLRSPAYRFLQEYPGKADAWSHF 98
Query: 94 VLRLVYCRTEDLRKWFLSMETALYRYRFLLG-----SSEAKRALMEEFDLP-CKAISRTE 147
+LRL E R W++ E L R+R S ++ AL E+ P +A R
Sbjct: 99 ILRLALGSFEFARDWWIQAERQLLRFRLRRRALSLRSIDSLVALAEQVAPPELRAAPRPL 158
Query: 148 FENAK---------------------EKLEQVARSFDQPLPTADAIFYKVPFEEVPELVA 186
E E+L+ + + L ++VPFE V + V
Sbjct: 159 LEAVPGEKAPKEVYDTLRGDGYPLIHEQLKNLGHTGTGNLENMGLPMFRVPFELVLQWVR 218
Query: 187 GRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQE-RDRLTPIVEA 245
R++++ G+A+V V LV+ + L + + + + R+RLTPI+
Sbjct: 219 HRQLWLQAGYAWVPALAVNELVLGWYEIFLRRGTATAEQHFAVAPKATRLRERLTPILLY 278
Query: 246 LSMSYLGPDYSQTKEFG-----------EISIKDLDQLARSSFPLCMRHLFDKLREDHHL 294
L + ++ + G E+ + +LD A PLCMR L ++LR+ HL
Sbjct: 279 LREQHSAWKRTRIRGTGRLHGIDRPLGTELHLTELDT-AIPDMPLCMRLLLERLRQCGHL 337
Query: 295 KHGGRMQLGLFLKGVGLRMEDALAFWKAEF-----SQKVGAERFDKEYAYSIRHNYGKEG 349
+HGGR+QLGLFLK G + D+L FW+ + + F++EYAY IR+NYG EG
Sbjct: 338 RHGGRLQLGLFLKEAGFTLSDSLQFWRDALRVNSNGRPIANHEFEREYAYGIRYNYGLEG 397
Query: 350 KRTDYTPYSCQKIISSTPGVGDHHGCPYRHFSEENLRAAL 389
KR + +SC +I+ PG G+HHGCP++ ++ L A+
Sbjct: 398 KRKNCPAFSCARILDMRPGAGEHHGCPFQELAQPALEQAV 437
>gi|224141235|ref|XP_002323980.1| predicted protein [Populus trichocarpa]
gi|222866982|gb|EEF04113.1| predicted protein [Populus trichocarpa]
Length = 100
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 66/73 (90%), Positives = 71/73 (97%)
Query: 307 KGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQKIISST 366
KGVGL+++DALAFWKAEFSQ VGAERFDKEYAYSIRHNYG+EGKRTDYTPYSCQ+I SST
Sbjct: 27 KGVGLKLDDALAFWKAEFSQMVGAERFDKEYAYSIRHNYGREGKRTDYTPYSCQEIFSST 86
Query: 367 PGVGDHHGCPYRH 379
PGVGDHHGCPYRH
Sbjct: 87 PGVGDHHGCPYRH 99
>gi|339248887|ref|XP_003373431.1| eukaryotic-type DNA primase, large subunit superfamily [Trichinella
spiralis]
gi|316970456|gb|EFV54390.1| eukaryotic-type DNA primase, large subunit superfamily [Trichinella
spiralis]
Length = 592
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 124/459 (27%), Positives = 206/459 (44%), Gaps = 51/459 (11%)
Query: 17 SVSTLPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKR-----PEEMENLVRDL 71
S+ L +YR P L + LE A+ R VL + + G +++ ++DL
Sbjct: 145 SLHNLQIYRQLPNLSIPLEKIFDLAIKRNDVLIAVDTVTSEGFENADILSRKLDFHLKDL 204
Query: 72 WKANMRH-----PEASEDVNK----DIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFL 122
H +SE V D+ SHF L + Y + WF E +L+RYRF
Sbjct: 205 HFGIAVHGTDLTNRSSEHVLNQRLDDVFSHFALMIAYADDVESCIWFQKAEISLFRYRFE 264
Query: 123 LGSSEAKRALMEEFDLPCKAISR--------TEFENAKEKLEQVARSFDQPLPTADAIFY 174
L + + + ++ D+ +SR ++++ K + E++ D D FY
Sbjct: 265 LENELSIKRFLQCNDIAYSVVSREIESGFHYLKYKSCKVRKEKI-YGVDSKNEITDEKFY 323
Query: 175 KVPFEEVPELVAGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQ 234
+V F++ L+ R V +++G A+V T F+ +S +L R+ I +
Sbjct: 324 QVTFKDALTLIKCREVILNRGSAFVRW--------TDFKVIVSDKFLLILRQNCKNIAKL 375
Query: 235 E-----RDRLTPIVEALSMSYLGPDYSQTKEFGEISIKDLDQLARSSFPLCMRHLFDKLR 289
+RL+ + +M K I++ +LD+L+ SFP CMR +++ L
Sbjct: 376 MPSLCCDERLSVLKNLFNMR------KSVKLLLPINVSNLDELSVISFPPCMRRMYECLV 429
Query: 290 EDHHLKHGGRMQLGLFLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEG 349
HL + GRMQ+ LFLK +G+ +E+AL FW S K E + +E Y++ YGK G
Sbjct: 430 HKRHLSNNGRMQIMLFLKHIGMSVENALKFWLQFTSSK--NEMYREEVNYTLLRLYGKAG 487
Query: 350 KRTDYTPYSCQKIISST--PGVGDHHGCPYRHFSEENLRAALGRMGVGSRAMEDVVDKVR 407
T+Y Y C+ +I+ V D GCP+ + +L+ L + V + + E ++
Sbjct: 488 SSTNYCAYYCKTLINKQYRHSVLD-CGCPFSACNFSSLQTMLNQWNVSASSQEKILKCFS 546
Query: 408 NRHYQLACTLTFEAVHSSSCDA----GINHPNQYFSDSH 442
+ AC L F H + I HPNQYF +S
Sbjct: 547 EKKPNEACRLFFAHSHGHDLENLSVPVILHPNQYFFESQ 585
>gi|340506083|gb|EGR32312.1| hypothetical protein IMG5_088440 [Ichthyophthirius multifiliis]
Length = 302
Score = 140 bits (354), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 88/268 (32%), Positives = 140/268 (52%), Gaps = 30/268 (11%)
Query: 207 LVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEALSMSYLGPDYSQTKEFGEISI 266
L+ + S L + + + +K+ + + + +RL + + M + SQ ++ +
Sbjct: 9 LIQDIYESRLYEEMKILQQKFINNGNKIDDERLMFLQDLHKMEIIED--SQQYSSAQLRM 66
Query: 267 KDLDQL-ARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWKAEFS 325
++D+L R P CM +L L ++HHLKH GR+QLGLFLKG GL + +AL FW+ +FS
Sbjct: 67 NEIDRLQKRGDMPPCMTYLIQGLNDNHHLKHFGRLQLGLFLKGAGLSLNEALHFWRQKFS 126
Query: 326 QKVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQKIISSTPGVGDHHGCPYRHFSEENL 385
K ++F K Y Y+I+HNYGK+GK TDYTP SCQKI+S P ++HGCP++ L
Sbjct: 127 -KFTEDQFKKNYEYNIKHNYGKQGKHTDYTPMSCQKILSYNPLSDEYHGCPFKVMETNKL 185
Query: 386 RAALG-RMGVGSRAMEDV--VDKVRN-RHY------------QLACTLTFEAVHS----- 424
+ L + D+ K++ + Y +LAC F+ ++
Sbjct: 186 KNWLKIYYKINDNQYYDIEKFKKLKTFKQYFFFNIILFINKQKLACRELFKIKNTPLDKK 245
Query: 425 SSCDAGI-----NHPNQYFSDSHKILQP 447
S+ D I HPN YF + +I +P
Sbjct: 246 SNLDQKIVDKIGTHPNVYFEQALRINEP 273
>gi|169806208|ref|XP_001827849.1| DNA primase large subunit [Enterocytozoon bieneusi H348]
gi|161779297|gb|EDQ31320.1| DNA primase large subunit [Enterocytozoon bieneusi H348]
Length = 398
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 100/355 (28%), Positives = 178/355 (50%), Gaps = 49/355 (13%)
Query: 31 EVRLEDFEVFAMDRLRVLKGISDALARGKRPEEMENLVRDLWKANMRHPEASEDVNKDII 90
++ E F+ +++DR+++L+ I +N+ + + KD+I
Sbjct: 26 KIPYETFKSYSIDRIKLLRKIESG---------TDNIF------------TIDSLYKDLI 64
Query: 91 SHFVLRLVYCRTEDLRKWFLSMETALYRYRF-LLGSSEAKRALMEEFDLPCKAISRTEFE 149
SHF LRL+ ++ +WF++MET L++YR + + E +F ++ +
Sbjct: 65 SHFALRLIVIQSHVTLQWFVTMETKLFKYRINQMNTYEFNHFYNTKFISKFNNLTESTIT 124
Query: 150 NAKEKLEQVAR--SFDQPLPTADA--IFYK-VPFEEVPELVAGRRVYIHKGHAYVAMHQV 204
N +K +QV + + Q P D I Y+ + F + ++ R++ + +G+
Sbjct: 125 NNIKKEKQVQKISKYGQYDPDFDIPPINYEFIHFSKCSHTMSKRKIKLVQGYLPSTPETQ 184
Query: 205 VSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEALSMSYLGPDYSQTKEFGEI 264
V+T+F + + + + ++ ++IR++ RL S ++ S K I
Sbjct: 185 KDFVITEFNNFIEREM---HKLSNNSIRDERLIRLH------SDLFISCKNSSDKGTPNI 235
Query: 265 SIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWKAEF 324
SIK++ Q +FPLCM+ L KL + HLKH R QL LFLK +G+ +ED +++ ++
Sbjct: 236 SIKNIYQ---ENFPLCMKLLIGKLEREKHLKHNDRNQLSLFLKDLGVPIEDTISYMQSHL 292
Query: 325 SQKVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQKI--ISSTPGVGDHHGCPY 377
Q +KE Y+IRHNYG EGK+ +Y+ +SCQKI +SS P GCP+
Sbjct: 293 YQMK-----NKELVYNIRHNYGLEGKKANYSCFSCQKIFSLSSEPNFT---GCPF 339
>gi|332026437|gb|EGI66565.1| Putative DNA primase large subunit [Acromyrmex echinatior]
Length = 416
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 99/374 (26%), Positives = 171/374 (45%), Gaps = 27/374 (7%)
Query: 83 EDVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKRALMEEFDLPCKA 142
E+ D I HFVLRL+ + DL +++ E+ L+++R S L+++ +
Sbjct: 47 ENSTYDKIGHFVLRLLASTSSDLCIYWIGKESLLFKHRLDSLSPRRLHKLLKQITWKLQ- 105
Query: 143 ISRTEFENAKEKLEQVARSFDQPLP---------TADAIFYKVPFEEVPELVAGRRVYIH 193
I + + L ++ + + QPL + Y++ FE VP+LV R + +H
Sbjct: 106 IFKDKKSTIDTILIELCKFYLQPLVFKHLTSNCHDCNNFRYEMRFEIVPDLVKERELVLH 165
Query: 194 KGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEALSMSYLGP 253
G+ ++ F + + + + R+ I+ R I+ SYL
Sbjct: 166 NGNVITHCSDWKKVLRLLFSNYVINEMNIMKRQSQYIIKHDLRFH---ILNQKIQSYL-- 220
Query: 254 DYSQTKEFGEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRM 313
+ + G+++I ++ ++ FPLCM+HL LR H L H R+ LFLK +G+ +
Sbjct: 221 -FKEGVPHGKVTIDNI-EIEAQKFPLCMQHLHSLLRRRHRLSHYARLYYSLFLKEIGMTL 278
Query: 314 EDALAFWKAEFSQ-----KVGAERF---DKEYAYSIRHNYGKEGKRTDYTPYSCQKIISS 365
ED++ FWK E+S+ V + + +K++ YSIRH YG EG R Y C I
Sbjct: 279 EDSIVFWKQEYSKPHTCTSVCSHNWQSNEKKFIYSIRHMYGLEGSRRTYKTPDCNLICVG 338
Query: 366 TPGVGDHHGCPYRHFSEENLRAALGRMGVGSRAMEDVVDKVRNRHYQLACTLTFEAVHSS 425
G GCP++ F LR L ++ V +E ++ + + ++ CT + V
Sbjct: 339 ISGATYEGGCPFKDFDTSVLRNLL-QVSVNEDEIEKFINNISTKDPEVLCTTFLKLVRED 397
Query: 426 SC-DAGINHPNQYF 438
D I P QY+
Sbjct: 398 DINDVVIKSPVQYY 411
>gi|390358242|ref|XP_003729212.1| PREDICTED: DNA primase large subunit-like [Strongylocentrotus
purpuratus]
Length = 457
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 109/372 (29%), Positives = 166/372 (44%), Gaps = 75/372 (20%)
Query: 83 EDVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRF-LLGSSEAKRALMEEFDLPCK 141
E KD ISHF+LRLVY +L + L ET L+ +RF + S E + L C+
Sbjct: 58 EGSRKDRISHFLLRLVYSSDAELSSYMLKAETELFCHRFSCMNSEELVKFLKATHRFLCR 117
Query: 142 ---------------------------AISRTE--FENAKEKLEQVARSFDQPLPTA--- 169
+ISR+ F A L V + L TA
Sbjct: 118 LQRHQKLQELNSASTSQGSRPRPVVLSSISRSHEAFSTAVSNLLHV---LNLILETAGSW 174
Query: 170 ----------DAIFYKVPFEEVPELVAGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKA 219
+ VPF+ LV+ R+V + +G AYV+ + ++ F L +
Sbjct: 175 KLAVKLYMDYSCCVFAVPFQHALCLVSSRQVMLDRGMAYVSFSNLHIVLAAMFEDILQEG 234
Query: 220 LILTNRKWTSTIREQERDR-LTPIVEALSMSYLGPDYSQTKEFGEISIK---------DL 269
I R + E R R ++ V A + S+T IS++ ++
Sbjct: 235 -IRVARYVPHHVLEDSRMRSISREVHAAFLRAQAGSGSKT-----ISVQGDGKVIREYEI 288
Query: 270 DQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWKAEFSQ--- 326
D L R FP CM HL LR+ H L+H R+Q LFLK +GL ++DA+ FW++E+S+
Sbjct: 289 DHLHRF-FPPCMSHLHRTLRKKHRLRHFSRIQYTLFLKNIGLPIDDAIHFWRSEYSKPSR 347
Query: 327 ----KVGA-----ERFDKEYAYSIRHNYGKEGKRTDYTPYSCQKIISSTPGVGDHHGCPY 377
+VG + ++ Y Y+IRH YG EG RT+Y +SC+ I G G+ GCP+
Sbjct: 348 CHDNRVGGCQHSWAKDERRYTYNIRHLYGLEGSRTNYRAHSCKSIQMMQLGYGEEGGCPF 407
Query: 378 RHFSEENLRAAL 389
+HF + + + +
Sbjct: 408 KHFDDASFQGLM 419
>gi|322798701|gb|EFZ20299.1| hypothetical protein SINV_03781 [Solenopsis invicta]
Length = 436
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 101/387 (26%), Positives = 176/387 (45%), Gaps = 40/387 (10%)
Query: 83 EDVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKRALMEEFDLPCKA 142
E+ D I HFVLRL+ + DL ++L+ E+ L+++R S L+++ +
Sbjct: 54 ENSTYDKIGHFVLRLLSSISSDLCVYWLAKESLLFKHRLNNISPRQLHKLLKQITWKLQ- 112
Query: 143 ISRTEFENAKEKLEQVARSFDQPLPTADAIF---------YKVPFEEVPELVAGRRVYIH 193
+ ++E L ++ + + QPL I Y+V FE VPELV R + ++
Sbjct: 113 LFKSEKSAIDSTLIELCKFYLQPLVFKHLISNCYDCNDFQYEVRFEIVPELVKERELVLN 172
Query: 194 KGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEALSMSYLGP 253
G+ ++ + F + + + + ++ TI+ RD I+ SYL
Sbjct: 173 NGNVVTNCSNWKKVLQSLFSNYIINEMNIMKKQAQHTIK---RDLRFHILNQKIQSYL-- 227
Query: 254 DYSQTKEFGEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRM 313
+ + G +++ ++D A+ FPLCM+HL LR H L H R+ LFLK VG+ +
Sbjct: 228 -FKEGIPHGNVTVDNIDAEAQK-FPLCMQHLHSLLRSRHRLSHYARLYYSLFLKEVGMTL 285
Query: 314 EDALAFWKAEFSQ----KVGA----ERFDKEYAYSIRHNYGKEGKRTDYTPYSCQKII-- 363
ED++ FW+ E+S+ +G + +K++ YSIRH YG EG R +Y C I
Sbjct: 286 EDSIVFWRQEYSKPHTCTMGCSHNWQSNEKKFIYSIRHMYGLEGARKNYKTPDCNSICVK 345
Query: 364 -----------SSTPGVGDHHGCPYRHFSEENLRAALGRMGVGSRAMEDVVDKVRNRHYQ 412
+ G GCP++ F + L + + +E V+ + + +
Sbjct: 346 LFTFQISKLLQAGISGATYEGGCPFKDFDMSAFKNLL-QASLTQEEIEKFVNNISIKDPE 404
Query: 413 LACTLTFEAVHSSSC-DAGINHPNQYF 438
+ CT + + D I P QY+
Sbjct: 405 VLCTAFLKLIRKDDINDVIIKSPVQYY 431
>gi|407040710|gb|EKE40285.1| DNA primase large subunit, putative, partial [Entamoeba nuttalli
P19]
Length = 515
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 103/362 (28%), Positives = 158/362 (43%), Gaps = 39/362 (10%)
Query: 105 LRKWFLSMETALYRYRFLLGSSEAKRALMEEFDLPCKAISRTEFENAKEKLEQVARSFDQ 164
L WF+ E +Y R S EA + +F + I+ E E + F
Sbjct: 136 LENWFILCEMRVYLARIETLSLEALSQFLVKFGYHPQQITVDE-----EGFLKQQNYFQG 190
Query: 165 PLPTADAIFYKVPFEEVPELVAGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTN 224
P F KVPF E + + RR+ ++ G A++ ++V+ +V+ + R L + +
Sbjct: 191 P-------FIKVPFFEAGKNLKNRRLLLYHGSAFIEKNEVIDMVIMKNREKLQERV---K 240
Query: 225 RKWTSTIREQERDRLTPIVE---ALSMSYLGPDYSQTKEFGEISIKD-LDQLARSSFPLC 280
+ S + L PI+E L M G + T E K L + FP C
Sbjct: 241 NNYISPALGKVPYELKPILEYYQTLVMKITGLKTATTGFHVETCSKSFLKESGIELFPPC 300
Query: 281 MRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYS 340
M ++ K D HLKH G +QL +FLKGVGL MED F++ E KE Y+
Sbjct: 301 MYSVYRKFLHDKHLKHFGLLQLIMFLKGVGLSMEDCKKFFEE-------IEPLSKERIYN 353
Query: 341 IRHNYGKEGKRTDYTPYSCQKIISSTPGVGDHHGCPYRHFS------EENLRAALGRMGV 394
I H+YG+ G + DYT Y C +IS GD +GC S E+NL + + G+
Sbjct: 354 IEHSYGRAGAKIDYTGYGCNNLISQIRNAGDCNGCMMTTKSFKQEDIEDNLLSLMELKGI 413
Query: 395 G----SRAMEDVVDKVRNRHYQLACTLTFEAVHSSSCD---AGINHPNQYFSDSHKILQP 447
+++V+D + + ACT + D I HPN YF + +++
Sbjct: 414 DEIKREEILQNVIDLIISHQPTHACTKFLYLSQNKPFDDEIQDITHPNTYFLRAKRLVNE 473
Query: 448 KN 449
+N
Sbjct: 474 QN 475
>gi|443722414|gb|ELU11283.1| hypothetical protein CAPTEDRAFT_208161 [Capitella teleta]
Length = 352
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 102/357 (28%), Positives = 169/357 (47%), Gaps = 29/357 (8%)
Query: 21 LPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEEMENLVRDLWKANMRHPE 80
+ Y + P ++ L D + + R+ L + RG +M +LV +L E
Sbjct: 1 MTFYIHPPSGDLHLHDLSAWCLQRMTFLMDVYRC--RGS-TMQMRDLVDNLTTECECLIE 57
Query: 81 ASEDVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRF-LLGSSEAKRAL--MEEFD 137
S+ KD SHF LRL+ C +LR F+ E + +++RF SE + +L ++++
Sbjct: 58 GSK---KDATSHFTLRLMCCDDPELRDVFIQSEISFFKFRFSCFLRSEIQSSLKPLKKYH 114
Query: 138 LPCKAISRTEFENAKEKLEQVA--------RSFDQPLPTADAIFYKVPFEEVPELVAGRR 189
+ +S+ E +E L + RS + +++ F +VPF V +VA R
Sbjct: 115 AELR-LSKNLSEQEREILTLLDAITAQNDWRSLVKAYTQSNSGFIRVPFRFVCNMVAKRS 173
Query: 190 VYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERD-RLTPIVEALSM 248
V + KG A V ++ ++ F +L+LT + E D R+ + +
Sbjct: 174 VVLQKGTALVPCCKLSEVMAVVF------SLLLTEGMRVARCSRVEADSRMRRLYHTVRR 227
Query: 249 SYLGPDYSQTKEFGEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKG 308
+L + ++ IS D+ L+ FPLCM L+ DH L+H R+QL LFLK
Sbjct: 228 KFLPVNNNENSVHNSISCDDISSLS-EFFPLCMSMKLQTLQVDHRLRHHSRIQLTLFLKE 286
Query: 309 VGLRMEDALAFWKAEFSQKVGAERFDKE---YAYSIRHNYGKEGKRTDYTPYSCQKI 362
+GL + +AL FW+ E+SQ + E Y Y+IRH YG EG R +Y + C+ +
Sbjct: 287 LGLPLNEALHFWRQEYSQPGPRHSWKDEERRYTYNIRHLYGLEGSRRNYRSHCCESL 343
>gi|429962833|gb|ELA42377.1| hypothetical protein VICG_00475 [Vittaforma corneae ATCC 50505]
Length = 383
Score = 127 bits (320), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 92/326 (28%), Positives = 162/326 (49%), Gaps = 34/326 (10%)
Query: 53 DALARGKRPEEMENLVRDLWKANMRHPEASEDVNKDIISHFVLRLVYCRTEDLRKWFLSM 112
+A R K +EN +RD N+ A ED+N SHF LRLV +++ WF+
Sbjct: 32 NAHLRLKVLRRLENNIRD----NISVKTAEEDLN----SHFCLRLVCAQSKWSSNWFVVQ 83
Query: 113 ETALYRYRFLLGSSEAKRALMEEFDLPCKAISRTEFENAKEKLEQVARSFDQPLPTADAI 172
ET L++++ LL SE++R +E+ E + +F + +
Sbjct: 84 ETQLFKHKLLLNPSESRRFFLEKVWPHLNVTKYIEHSTVYDPDSHNMLNFTEKV------ 137
Query: 173 FYKVPFEEVPELVAGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIR 232
KV F + +++ R ++ G+ + +VS + FR L K + + + T+
Sbjct: 138 --KVHFTKCSDIIPKRTHNLNFGYFDIDDEVLVSFLTETFRKWLEKQM---HELYEKTVI 192
Query: 233 EQERDRLTPIVEALSMSYLGPDYSQTKEFGEISIKDLDQLARSSFPLCMRHLFDKLREDH 292
+ + +RL + + + +S ++I D+ +L+ + FPLC++ + +L+
Sbjct: 193 DSD-ERLINLNKMI--------FSTESSTEALAIGDIMKLS-NLFPLCIKGILGRLKAQK 242
Query: 293 HLKHGGRMQLGLFLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRT 352
HLK+ R L LF K +G+ + + + F+K+ F ++F+KEY Y+IRHNYG EGKR
Sbjct: 243 HLKYQDRQTLCLFFKDIGMGLNECIEFFKSNFG--CTHDQFNKEYLYNIRHNYGLEGKRA 300
Query: 353 DYTPYSCQKIIS-STPGVGDHHGCPY 377
+Y ++C +II S GV GCP+
Sbjct: 301 NYHSFTCSRIIGFSNDGVS--FGCPF 324
>gi|67478223|ref|XP_654525.1| DNA primase large subunit [Entamoeba histolytica HM-1:IMSS]
gi|56471581|gb|EAL49139.1| DNA primase large subunit, putative [Entamoeba histolytica
HM-1:IMSS]
Length = 523
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 103/362 (28%), Positives = 157/362 (43%), Gaps = 39/362 (10%)
Query: 105 LRKWFLSMETALYRYRFLLGSSEAKRALMEEFDLPCKAISRTEFENAKEKLEQVARSFDQ 164
L WF+ E +Y R S EA + +F + I+ E E + F
Sbjct: 134 LENWFVLCEMRVYLARIETLSLEALSQFLVKFGYHPQQITVDE-----EGFLKQQNYFQG 188
Query: 165 PLPTADAIFYKVPFEEVPELVAGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTN 224
P F KVPF E + + RR+ ++ G A++ ++V+ +V+ + R L + +
Sbjct: 189 P-------FIKVPFFEAGKNLKNRRLLLYHGSAFIEKNEVIDMVIMKNREKLQERV---K 238
Query: 225 RKWTSTIREQERDRLTPIVE---ALSMSYLGPDYSQTKEFGEISIKD-LDQLARSSFPLC 280
+ S + L PI+E L M G + T E K L + FP C
Sbjct: 239 NNYISPALGKVPYELKPILEYYQTLVMKITGLKTATTGFHVETCSKSFLKESGIELFPPC 298
Query: 281 MRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYS 340
M ++ K D HLKH G +QL +FLKGVGL MED F++ E KE Y+
Sbjct: 299 MYSIYRKFLHDKHLKHFGLLQLIMFLKGVGLSMEDCKKFFEE-------IEPLSKERIYN 351
Query: 341 IRHNYGKEGKRTDYTPYSCQKIISSTPGVGDHHGCPYRHFS------EENLRAALGRMGV 394
I H+YG+ G + DYT Y C +IS GD +GC S E+NL + + G+
Sbjct: 352 IEHSYGRAGAKIDYTGYGCNNLISQIRNAGDCNGCMMTTKSFKQEDIEDNLLSLMELKGI 411
Query: 395 G----SRAMEDVVDKVRNRHYQLACTLTFEAVHSSSCDAGIN---HPNQYFSDSHKILQP 447
++ V+D + + ACT + D I HPN YF + +++
Sbjct: 412 DEIKREEILQSVIDLIISYQPTHACTKFLYLSQNKPFDDEIQDIIHPNTYFLRAKRLVNE 471
Query: 448 KN 449
+N
Sbjct: 472 QN 473
>gi|449707753|gb|EMD47352.1| DNA primase large subunit, putative [Entamoeba histolytica KU27]
Length = 526
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 103/362 (28%), Positives = 157/362 (43%), Gaps = 39/362 (10%)
Query: 105 LRKWFLSMETALYRYRFLLGSSEAKRALMEEFDLPCKAISRTEFENAKEKLEQVARSFDQ 164
L WF+ E +Y R S EA + +F + I+ E E + F
Sbjct: 137 LENWFVLCEMRVYLARIETLSLEALSQFLVKFGYHPQQITVDE-----EGFLKQQNYFQG 191
Query: 165 PLPTADAIFYKVPFEEVPELVAGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTN 224
P F KVPF E + + RR+ ++ G A++ ++V+ +V+ + R L + +
Sbjct: 192 P-------FIKVPFFEAGKNLKNRRLLLYHGSAFIEKNEVIDMVIMKNREKLQERV---K 241
Query: 225 RKWTSTIREQERDRLTPIVE---ALSMSYLGPDYSQTKEFGEISIKD-LDQLARSSFPLC 280
+ S + L PI+E L M G + T E K L + FP C
Sbjct: 242 NNYISPALGKVPYELKPILEYYQTLVMKITGLKTATTGFHVETCSKSFLKESGIELFPPC 301
Query: 281 MRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYS 340
M ++ K D HLKH G +QL +FLKGVGL MED F++ E KE Y+
Sbjct: 302 MYSIYRKFLHDKHLKHFGLLQLIMFLKGVGLSMEDCKKFFEE-------IEPLSKERIYN 354
Query: 341 IRHNYGKEGKRTDYTPYSCQKIISSTPGVGDHHGCPYRHFS------EENLRAALGRMGV 394
I H+YG+ G + DYT Y C +IS GD +GC S E+NL + + G+
Sbjct: 355 IEHSYGRAGAKIDYTGYGCNNLISQIRNAGDCNGCMMTTKSFKQEDIEDNLLSLMELKGI 414
Query: 395 G----SRAMEDVVDKVRNRHYQLACTLTFEAVHSSSCDAGIN---HPNQYFSDSHKILQP 447
++ V+D + + ACT + D I HPN YF + +++
Sbjct: 415 DEIKREEILQSVIDLIISYQPTHACTKFLYLSQNKPFDDEIQDIIHPNTYFLRAKRLVNE 474
Query: 448 KN 449
+N
Sbjct: 475 QN 476
>gi|426353633|ref|XP_004044293.1| PREDICTED: DNA primase large subunit-like [Gorilla gorilla gorilla]
Length = 222
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 56/116 (48%), Positives = 78/116 (67%), Gaps = 2/116 (1%)
Query: 332 RFDKEYAYSIRHNYGKEGKRTDYTPYSCQKII-SSTPGVGDHHGCPYRHFSEENLRAALG 390
+FDK Y+Y+IRH++GKEGKRTDYTP+SC KII S+ P GD+HGCP+RH E L+ L
Sbjct: 53 QFDKGYSYNIRHSFGKEGKRTDYTPFSCLKIILSNPPSQGDYHGCPFRHSDPELLKQKLQ 112
Query: 391 RMGVGSRAMEDVVDKVRNRHYQLACTLTFEAVHS-SSCDAGINHPNQYFSDSHKIL 445
+ + ++D V+ HYQ+AC FE +H+ C +NHPNQ+F +S + L
Sbjct: 113 SYKISPGGISQILDLVKGTHYQVACQKYFEMIHNVDDCGFSLNHPNQFFCESQRTL 168
>gi|62858699|ref|NP_001016008.1| primase, DNA, polypeptide 2 (58kDa) [Xenopus (Silurana) tropicalis]
gi|213625566|gb|AAI70875.1| DNA primase, p58 subunit [Xenopus (Silurana) tropicalis]
gi|213627167|gb|AAI70847.1| DNA primase, p58 subunit [Xenopus (Silurana) tropicalis]
Length = 256
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/216 (35%), Positives = 126/216 (58%), Gaps = 13/216 (6%)
Query: 19 STLPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISD-ALARGKRPEEM-ENLVRDLWKANM 76
S+L Y++ P + L +FE FA++RL++LK + + ++ K ++ + L ++L K
Sbjct: 26 SSLQFYQHPPTENISLTEFETFAIERLKLLKAVENLGVSYLKNSDDYNKKLEQELRKLKF 85
Query: 77 RHPEASEDVN--------KDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEA 128
+ +++N KD ISHF+LRL YC++EDLR+WF+ E L+++RF L + E
Sbjct: 86 PYRALQDEINDEVYDLRRKDHISHFILRLAYCQSEDLRRWFIQQEMDLFKFRFSLLTKEK 145
Query: 129 KRALMEEFDLPCKAISRTEFENAKEKLEQVARSFDQPLPTADAI-FYKVPFEEVPELVAG 187
+ ++ DL AIS+ E KE L + SF L + + FYKVPF+ +LV
Sbjct: 146 VQEFLKLNDLEYVAISQEEKNMHKEDL--MNSSFGLSLTKMEDLEFYKVPFQAALDLVRP 203
Query: 188 RRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILT 223
R+V++ G AY+ +VS+V+ FR+ LSKAL ++
Sbjct: 204 RKVFLWHGFAYIPHTDIVSIVLNDFRTKLSKALAVS 239
>gi|167379430|ref|XP_001735137.1| DNA primase large subunit [Entamoeba dispar SAW760]
gi|165903013|gb|EDR28685.1| DNA primase large subunit, putative [Entamoeba dispar SAW760]
Length = 463
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 100/362 (27%), Positives = 159/362 (43%), Gaps = 39/362 (10%)
Query: 105 LRKWFLSMETALYRYRFLLGSSEAKRALMEEFDLPCKAISRTEFENAKEKLEQVARSFDQ 164
L WF+ E +Y R S EA + +F + I+ E E + F
Sbjct: 82 LENWFVLCEMRVYLARIETLSLEALSQFLVKFGYHPQQITVDE-----EGFLKQQNYFHG 136
Query: 165 PLPTADAIFYKVPFEEVPELVAGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTN 224
P F KVPF E + + RR+ ++ G A++ ++V+ +V+ + R L + +
Sbjct: 137 P-------FIKVPFFEAGKNLKNRRLLLYHGSAFIEKNEVIDMVIMKNREKLQERV---K 186
Query: 225 RKWTSTIREQERDRLTPIVE---ALSMSYLGPDYSQTKEFGEISIKD-LDQLARSSFPLC 280
+ S + L PI+E L M G + T E K + + FP C
Sbjct: 187 NNYVSPALGKVPYELKPILEYYQTLVMKITGFKTATTGFHVETCSKSFIKESGIELFPPC 246
Query: 281 MRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYS 340
M ++ K D HLKH G +QL +FLKGVGL MED F++ E KE Y+
Sbjct: 247 MYSIYRKFLHDKHLKHFGLLQLIMFLKGVGLSMEDCKKFFEE-------IEPLSKERIYN 299
Query: 341 IRHNYGKEGKRTDYTPYSCQKIISSTPGVGDHHGC--PYRHFSEENLRAALGRM----GV 394
I H+YG+ G + DYT Y C +IS GD +GC + F +E++ L + G+
Sbjct: 300 IEHSYGRAGAKIDYTGYGCNNLISQIRNPGDCNGCMMTTKSFKQEDIEDNLLNLMELKGI 359
Query: 395 G----SRAMEDVVDKVRNRHYQLACTLTFEAVHSSSCD---AGINHPNQYFSDSHKILQP 447
+++V++ + + ACT + D I HPN YF + +++
Sbjct: 360 DEIKREEILQNVIELIISHQPTHACTKFLYLSQNKPFDDEIQDIAHPNTYFLRAKRLVNE 419
Query: 448 KN 449
+N
Sbjct: 420 QN 421
>gi|19173661|ref|NP_597464.1| DNA POLYMERASE ALPHA/PRIMASE LARGE SUBUNIT [Encephalitozoon
cuniculi GB-M1]
gi|19170867|emb|CAD26641.1| DNA POLYMERASE ALPHA/PRIMASE LARGE SUBUNIT [Encephalitozoon
cuniculi GB-M1]
Length = 399
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 100/300 (33%), Positives = 145/300 (48%), Gaps = 30/300 (10%)
Query: 82 SEDVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKRALMEEFDLPCK 141
S + +DI+SHF R+V + WF++ E L R R A+ + E LP
Sbjct: 56 STSIEEDILSHFFCRVVCSQDAWNAVWFVNAEVNLLRLRISKNPGGARAFFLSEV-LPHM 114
Query: 142 AISRTEFENAKEKLEQVARSFDQPLPTADAIFYKVPFEEVPELVAGRRVYIHKGHAYVAM 201
+RT+ + L +R + +A + V F +V +L+ R V G+ +
Sbjct: 115 DGARTQ--DGVLVLGMRSRYNPDVVASAASSEVLVHFTKVIDLIGKRAVVPEGGYLRLND 172
Query: 202 HQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEALSMSYLG--PDYSQTK 259
+ SL+V++FR LS + S+ ER R+ LS S L Y +
Sbjct: 173 EGIGSLLVSEFRRYLSNRM--DELVEISSNEPDERMRV------LSTSLLANPTGYERGT 224
Query: 260 EFGEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAF 319
F L+ R FP CM+ + ++LR++ HLK+ R L LFLK G+ +ED +AF
Sbjct: 225 NF------SLESSERY-FPPCMQDIMERLRKNKHLKYNDRQTLCLFLKDCGMSVEDGIAF 277
Query: 320 WKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQKII--------SSTPGVGD 371
++ F K E FDKEY YSIRHNYG EGKR +Y+ +SC KI SS P VGD
Sbjct: 278 FRGSF--KAPREVFDKEYLYSIRHNYGLEGKRANYSCFSCSKIANMTNEERRSSCPFVGD 335
>gi|402469032|gb|EJW04100.1| hypothetical protein EDEG_01622 [Edhazardia aedis USNM 41457]
Length = 428
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 117/452 (25%), Positives = 199/452 (44%), Gaps = 49/452 (10%)
Query: 7 QRSRTNTPNDSVSTLPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEEMEN 66
+R R P + Y P + +F+ A+DR++ LK + E
Sbjct: 2 KRIRIEEPEKKI---LFYAKLPIANIDYCNFKEKALDRIKQLKTL----------ESKHE 48
Query: 67 LVRDLWKANMRHPEASEDVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRF-LLGS 125
L L P + ED D+ SHF +L+ +T KWF+SMET L+ + +L +
Sbjct: 49 LFLSL------QPTSYED---DVKSHFCAKLICAQTMWSVKWFISMETLLFTKKIQILSN 99
Query: 126 SEAKRALMEEFDLPCKAISRTEFENAKE----KLEQVARSFDQPLPTADAIFYKVPFEEV 181
E K +F +P ++ +N K+ K +Q + + V F +V
Sbjct: 100 EEVKGFFFNDF-IP--KLNGMTVDNEKKIVILKHNMEYTGDNQNIKSIKNYAINVHFSKV 156
Query: 182 PELVAGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTP 241
+ + + I +G + + +++ FR L K +IL K R +R+
Sbjct: 157 IDAIQKHEIEIKQGFVSINENLYKIIIINAFRKYLEKEMILLYAKC----RLDNDERMFK 212
Query: 242 IVEALSMSYLGPDYSQTKEFGEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQ 301
+ L L S EF +IK+++ + FP C+ L KL++ HLK+ R+
Sbjct: 213 LHHHLFDQNLLVSKS---EFT--TIKNME----AYFPPCITGLISKLKKIQHLKYVDRLT 263
Query: 302 LGLFLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQK 361
L F K + + ++D + ++K F K G KEY Y IRH+YG EG R Y Y CQK
Sbjct: 264 LVRFFKDINMPVDDCIKYFKNNF--KAGKTDAMKEYTYMIRHSYGLEGSRKSYKSYYCQK 321
Query: 362 IISSTPGVGDHHGCPYRHFSEENLRAALGRMGVGSRAMEDVVDKVRNRHYQLACTLTFEA 421
+IS + G D +GCP+ + A + + + D+ D + YQ+ACT ++
Sbjct: 322 VISFSDG-KDSYGCPFVRDLNYVSKYANDK-NIKKDDIRDIEDIAKKGEYQIACTKVLQS 379
Query: 422 VHSS--SCDAGINHPNQYFSDSHKILQPKNNN 451
++ S + ++ P +++ K + K NN
Sbjct: 380 CINTTLSINETVDSPFSFYNKYTKAYENKGNN 411
>gi|449329121|gb|AGE95395.1| DNA polymerase alpha/primase large subunit [Encephalitozoon
cuniculi]
Length = 399
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 100/300 (33%), Positives = 144/300 (48%), Gaps = 30/300 (10%)
Query: 82 SEDVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKRALMEEFDLPCK 141
S + +DI+SHF R+V + WF++ E L R R A+ + E LP
Sbjct: 56 STSIEEDILSHFFCRVVCSQDAWNAVWFVNAEVNLLRLRISKNPGGARAFFLSEV-LPHM 114
Query: 142 AISRTEFENAKEKLEQVARSFDQPLPTADAIFYKVPFEEVPELVAGRRVYIHKGHAYVAM 201
+RT+ + L +R + +A + V F +V +L+ R V G+ +
Sbjct: 115 DGARTQ--DGVLVLGMRSRYNPDVVASAASSEVLVHFTKVIDLIGKRAVVPEGGYLRLND 172
Query: 202 HQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEALSMSYLG--PDYSQTK 259
+ SL+V +FR LS + S+ ER R+ LS S L Y +
Sbjct: 173 EGIGSLLVNEFRRYLSNRM--DELVEISSNEPDERMRV------LSTSLLANPTGYERGT 224
Query: 260 EFGEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAF 319
F L+ R FP CM+ + ++LR++ HLK+ R L LFLK G+ +ED +AF
Sbjct: 225 NF------SLESSERY-FPPCMQDIMERLRKNKHLKYNDRQTLCLFLKDCGMSVEDGIAF 277
Query: 320 WKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQKII--------SSTPGVGD 371
++ F K E FDKEY YSIRHNYG EGKR +Y+ +SC KI SS P VGD
Sbjct: 278 FRGSF--KAPREVFDKEYLYSIRHNYGLEGKRANYSCFSCSKIANMTNEERRSSCPFVGD 335
>gi|123423419|ref|XP_001306374.1| Eukaryotic-type DNA primase, large subunit family protein
[Trichomonas vaginalis G3]
gi|121887944|gb|EAX93444.1| Eukaryotic-type DNA primase, large subunit family protein
[Trichomonas vaginalis G3]
Length = 421
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 96/374 (25%), Positives = 168/374 (44%), Gaps = 50/374 (13%)
Query: 80 EASE---DVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKRALMEEF 136
EASE + KD IS F L ++Y TE+ + E+ L+ YR L S K+ + +F
Sbjct: 77 EASETDGEQTKDQISFFSLLMIYTETEEQQTKLADYESRLFFYRLKLSYSSPKQ--IPDF 134
Query: 137 DLPCKAISRTEFENAKEKLEQVARSFDQPLPTADAIFYKVPFEEVPELVAGRRVYIHKGH 196
P K + DQ + + +Y VPFE++ + + R + + G
Sbjct: 135 FWPSKELK------------------DQIINSQKDDYYCVPFEQIFDQIDVRTIDVENGI 176
Query: 197 AYVAMHQVVSLVVTQFRSNLSKAL---ILTNRKWTSTIREQERDRLTPIVEALSMSYLGP 253
A + V +V F L K L +N + S +R E R+T
Sbjct: 177 AKLTTDHVYQIVQKNFNDFLVKKLHSAEFSNLDFISYLR-SEFKRVT------------- 222
Query: 254 DYSQTKEFGEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRM 313
++++ +++ + ++L S P C+ + D L++ L GR +L +FLKG+G
Sbjct: 223 ---KSEDDQILTLDNYEELCHRSAPPCIYRILDSLKKSSQLSVKGRFELCMFLKGLGFDY 279
Query: 314 EDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQKIISSTPGVGDH- 372
FWK F + FDK+ S+++ Y +G + Y P+SC +I +
Sbjct: 280 FSQYIFWKKHFFSPKNPDLFDKQIVPSLKYIYCIDGNKKKYQPHSCIALIGQDNPENPYQ 339
Query: 373 -HGCPYRHFSEENLRAALGRMG--VGSRAMEDVVDKVRNRHYQLACTLTFEAV-HSSSCD 428
GCP+R+ L+ + +MG + + + + ++V H Q+AC L F+ + D
Sbjct: 340 VQGCPFRYMMRAELKMYIKKMGRKIKNEVISKICEQV-PEHPQIACKLFFDGMFEEDPLD 398
Query: 429 -AGINHPNQYFSDS 441
AG++HP Q+F ++
Sbjct: 399 YAGMSHPIQFFKEA 412
>gi|427778023|gb|JAA54463.1| Putative eukaryotic-type dna primase large subunit [Rhipicephalus
pulchellus]
Length = 489
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 96/357 (26%), Positives = 156/357 (43%), Gaps = 33/357 (9%)
Query: 78 HPEASEDVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKRALMEEFD 137
H E +D +SHF LRL+ C + + E+ L++ RF + + +RA++E
Sbjct: 97 HEFLVEGSRQDSVSHFFLRLLLCPFKSALNTVIQAESMLFQCRFEALNWDERRAIIERAF 156
Query: 138 LPCKAISRTEF-ENAKEKLEQVARSFDQPLPT------ADAIFYKVPFEEVPELVAGRRV 190
K + R + ++ L + + D L A KVPFE LV+ RRV
Sbjct: 157 SESKELLRCNINQQFRDILTTLTKVLDAMLKNWSRIVEAKKFSVKVPFEHALSLVSARRV 216
Query: 191 YIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERD-RLTPIVEALSMS 249
+ G A + H + + F++ + + K ++ R +D R+ + ++L +
Sbjct: 217 ILQAGDAIIQEHHLPEFLAGMFQAACEQGT--AHFKRSAQFRTLHQDERMVELRKSLRAA 274
Query: 250 YLGP-DYSQTKEFGEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKG 308
+ Y T + ++D A FP CM L+ L+ D L H R LFLK
Sbjct: 275 FEAQRGYLTTG--SPLKADEVDSQAAVYFPPCMSALYATLKRDRRLAHDDRFIFSLFLKE 332
Query: 309 VGLRMEDALAFWKAEFSQKVGA--------ERFDKEYAYSIRHNYGKEGKRTDYTPYSCQ 360
+GL +++A+ FW + + G + YS+RH YG+EG+R DYT + C
Sbjct: 333 IGLDLKEAIQFWSRHYVEPPGKNATCSHTWQANTSRLMYSVRHMYGQEGRRVDYTAHGCA 392
Query: 361 KIISSTPGVGDHHGCPYRHFSEENLRAALGRMGVGSRAMEDVVDKVRNRHYQLACTL 417
+ V D+ CP F+ E +A G V MED+ N+ Y AC L
Sbjct: 393 Q-------VQDNSLCP---FTSEKFQAIYGEKEVED--MEDIAQLCENKQYIAACKL 437
>gi|401826457|ref|XP_003887322.1| putative DNA primase [Encephalitozoon hellem ATCC 50504]
gi|392998481|gb|AFM98341.1| putative DNA primase [Encephalitozoon hellem ATCC 50504]
Length = 399
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 102/322 (31%), Positives = 156/322 (48%), Gaps = 26/322 (8%)
Query: 82 SEDVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKRALMEEFDLPCK 141
S D DI+SHF R+V + WF++ E L R++ S A+ + E LP
Sbjct: 56 SMDAEDDILSHFFCRVVCSQDPWTATWFVNAEVNLLRHKISKNPSGARSFFLTEI-LP-- 112
Query: 142 AISRTEFENAKEKLEQVARSFDQPLPTADAIFYKVPFEEVPELVAGRRVYIHKGHAYVAM 201
+ + E+ L +R + V F +V +LV R V +G+ +
Sbjct: 113 HMEGAKVEDGILMLGMKSRYNPDVAGGMVSSNILVHFTKVIDLVGKRAVIPERGYIRLND 172
Query: 202 HQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEALSMSYLGPDYSQTKEF 261
V S++V ++R L + + +++R+ + ++ALS L S TK
Sbjct: 173 EGVRSMLVNEYRRYLDGRM---DELVETSLRDPDER-----MKALSTELLA---SSTKCE 221
Query: 262 GEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWK 321
IS LD+ + P C++ + +KLR + HLK+ R L LFLK G+ ++DA+ F++
Sbjct: 222 RNISFS-LDE-SEKYLPPCIQAIMEKLRRNKHLKYNDRQILCLFLKDCGMSIDDAIDFFR 279
Query: 322 AEFSQKVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQKIISSTPGVGDHHGCPY---- 377
F KVG E FDKEY YSIRHNYG EGKR +Y+ ++C K I++T CP+
Sbjct: 280 NSF--KVGREVFDKEYLYSIRHNYGLEGKRANYSCFTCSK-IANTTNEERKSSCPFVEDE 336
Query: 378 ---RHFSEENLRAALGRMGVGS 396
R SEE +GVGS
Sbjct: 337 EYIRKLSEEAEVDIEDVIGVGS 358
>gi|303389401|ref|XP_003072933.1| DNA polymerase alpha/primase large subunit [Encephalitozoon
intestinalis ATCC 50506]
gi|303302076|gb|ADM11573.1| DNA polymerase alpha/primase large subunit [Encephalitozoon
intestinalis ATCC 50506]
Length = 413
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 107/363 (29%), Positives = 165/363 (45%), Gaps = 30/363 (8%)
Query: 84 DVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKRALMEEFDLPCKAI 143
D D +SHF R+V + WF++ E L R R AK + E LP +
Sbjct: 58 DTEDDTLSHFFCRMVCSQDPWAATWFVNAEVNLLRLRMAKNPEGAKEFFLTEV-LP--YM 114
Query: 144 SRTEFENAKEKLEQVARSFDQPLPTADAIFYKVPFEEVPELVAGRRVYIHKGHAYVAMHQ 203
E N L A+ + V F +V ++V GRR+ I +G Y+ ++
Sbjct: 115 DGAEIRNGVLVLGMKAKYNPDCAIGMMSSEVLVHFTKVIDMV-GRRIVIPEG-GYLKLND 172
Query: 204 --VVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEALSMSYLGPDYSQTKEF 261
+ SL+ +FR L + N +R + +R+ + L L P +
Sbjct: 173 EGIRSLLGNEFRRYLEGKM---NELVEMFLRNPD-ERMKSLATKL---LLNPTTCEKNTV 225
Query: 262 GEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWK 321
S++D A FPLC++ + +LR++ HLK+ R L LFLK G+ +ED + F++
Sbjct: 226 --FSLED----AEKYFPLCIKAIMQRLRKNRHLKYNDRQTLCLFLKDCGMSVEDGIDFFR 279
Query: 322 AEFSQKVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQKIISSTPGVGDHHGCPYRHFS 381
F K G E FDKEY YSIRHNYG EGKR +YT ++C K I++T CP+
Sbjct: 280 RSF--KAGKEVFDKEYLYSIRHNYGLEGKRANYTCFTCSK-IANTTNEERKSNCPFVE-D 335
Query: 382 EENLRAALGRMGVGSRAMEDVVDKVRNRHYQLACTLTFEAVHSSSCDAGINHPNQYFSDS 441
E LR+ + + V D+ D + + CT E + D + P +Y+ +
Sbjct: 336 GEYLRSQIEGLEV------DIEDIMGVGTFSGRCTRFLEKLVQRKQDKLVVTPIRYYIEC 389
Query: 442 HKI 444
I
Sbjct: 390 RSI 392
>gi|440493951|gb|ELQ76372.1| Eukaryotic-type DNA primase, large subunit, partial
[Trachipleistophora hominis]
Length = 419
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 99/360 (27%), Positives = 160/360 (44%), Gaps = 40/360 (11%)
Query: 86 NKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRF-LLGSSEAKRALMEEFDLPCKAIS 144
N+D +SHF+ RL+ C +WF++MET L+R R SE K ++ K +
Sbjct: 89 NEDELSHFLCRLITCSVPWASQWFIAMETKLFRARLATYNLSEIKNFFYTKYLRRAKNL- 147
Query: 145 RTEFENAKEKLEQVARSFD-QPLPTADAIFYK---VPFEEVPELVAGRRVYIHKGHAYVA 200
N K Q F PT Y+ V F PELV +V + KG+ +
Sbjct: 148 ---LVNEKSVFIQDNTQFTLDNAPTNTLTDYQTVHVYFSRAPELVRDCKVELKKGYFVLH 204
Query: 201 MHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEALSMSYLGPDYSQTKE 260
+ +++ +FR L + + K + +R ER S L D +
Sbjct: 205 DANMAAILANEFREYLRGRM--DSLKANTNLRNDER-----------FSDLAVDLFSVPQ 251
Query: 261 FGEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFW 320
+K + A P C+ + +++ D HLK+ R L +LK GL + D++ F
Sbjct: 252 KSTGQLKSILDCA----PPCIDRIVKRMKHDRHLKYNDRQILIRYLKDCGLPVNDSIEFL 307
Query: 321 KAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQKIISSTPGVGDHHGCPYRHF 380
++ FS RFD+E+ Y +RHNYG EGKR +Y+ Y+C P V CP+
Sbjct: 308 RSNFS--CDPARFDREFVYVVRHNYGLEGKRANYSCYTC-------PQVVAMGACPFT-- 356
Query: 381 SEENLRAALGRMGVGSRAMEDVV-DKVRNRHYQLACTLTFEAVHSSSCDAGINHPNQYFS 439
S+ + L G + +EDV+ ++ NR+Y C++ + S D + P ++S
Sbjct: 357 SKCVISDYLSEKGF--QDIEDVICGEIENRNYLKGCSILLKHKRRSDDDIAVTSPFVFYS 414
>gi|345495155|ref|XP_001603954.2| PREDICTED: DNA primase large subunit-like [Nasonia vitripennis]
Length = 419
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 98/366 (26%), Positives = 163/366 (44%), Gaps = 44/366 (12%)
Query: 88 DIISHFVLRLVYCRTEDLRKWFLSMETALYRYRF-LLGSSEAKRALMEEFDLPCKAISR- 145
D + HF LRL+ ++ + +LS E L + R L+ + R L K I R
Sbjct: 52 DYVGHFTLRLITSKSNESFSQWLSKEILLLKKRLSLIHPRQLFRLL--------KTIRRH 103
Query: 146 -TEFENAKEKLEQVARSFDQPLPTADAI---------------FYKVPFEEVPELVAGRR 189
EN K ++ + T A ++K+ F +P+LV R
Sbjct: 104 VRRRENCKNPVDDILIEISSFYLTPKAFKHIISKHHSKNCTKYYHKIDFVLIPDLVEERS 163
Query: 190 VYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEALSMS 249
V +++G A V Q L+ + F++ ++L + ++ + D P ++ +
Sbjct: 164 VELYRGFATVYCSQWKDLLQSLFQT----FIVLEMKNQSALMHHLLAD---PRLDTIHRK 216
Query: 250 YLGPDYSQTKEFGEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGV 309
Y+++ G+I+ ++D A +FP CM HL +LR H L H R LFLK
Sbjct: 217 LFHGSYTKSYSSGKITALNIDNEA-FNFPPCMYHLHLELRRKHRLSHYARFYYTLFLKEC 275
Query: 310 GLRMEDALAFWKAEFSQKVGAERF--------DKEYAYSIRHNYGKEGKRTDYTPYSCQK 361
G+ +EDAL +WK E+S+ K++ YSIRH YG EG R +Y +C+
Sbjct: 276 GMNLEDALIYWKNEYSKPHSCTSLCVHDWQTDAKKFTYSIRHMYGLEGGRKNYKTPNCRG 335
Query: 362 IISSTPGVGDHHGCPYRHFSEENLRAALGRMGVGSRAMEDVVDKVRNRHYQLACTLTFEA 421
I PG GCP+ +F ++LR L + GS ++ ++ + Q C F
Sbjct: 336 ICEQVPGSNYEGGCPFSNFDTDSLRYLLQKSINGSE-LDQIMAVAPKQKPQDTCA-NFFK 393
Query: 422 VHSSSC 427
+ S++C
Sbjct: 394 LKSATC 399
>gi|413916166|gb|AFW56098.1| hypothetical protein ZEAMMB73_117262 [Zea mays]
gi|413916167|gb|AFW56099.1| hypothetical protein ZEAMMB73_117262 [Zea mays]
Length = 90
Score = 116 bits (291), Expect = 2e-23, Method: Composition-based stats.
Identities = 51/69 (73%), Positives = 61/69 (88%)
Query: 381 SEENLRAALGRMGVGSRAMEDVVDKVRNRHYQLACTLTFEAVHSSSCDAGINHPNQYFSD 440
SEENLRAAL +MGVG A+E+V+DKV+NRHYQ+ACTLTFEA H SCD+GINHPNQYFS+
Sbjct: 11 SEENLRAALNKMGVGGHALEEVMDKVKNRHYQVACTLTFEATHGVSCDSGINHPNQYFSE 70
Query: 441 SHKILQPKN 449
S K+L+ KN
Sbjct: 71 SQKVLRAKN 79
>gi|396081439|gb|AFN83056.1| DNA polymerase alpha/primase large subunit [Encephalitozoon
romaleae SJ-2008]
Length = 399
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 98/358 (27%), Positives = 165/358 (46%), Gaps = 32/358 (8%)
Query: 84 DVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKRALMEEFDLPCKAI 143
D+ D++SHF R+V + WF++ E L R R S A+ + E LP
Sbjct: 58 DIEDDVLSHFFCRMVCSQDPWAATWFVNAEVNLLRLRISKNPSGARSFFLTEI-LP---- 112
Query: 144 SRTEFENAKEKLEQVARSFDQPLPTADAIFYK---VPFEEVPELVAGRRVYIHKGHAYVA 200
R E ++ + + A + V F +V +L+ R +G+ +
Sbjct: 113 -RMEGGKVQDGVLILGMKSRYNPDVAGGMVSSNVLVHFTKVIDLIGKRLAVPERGYLKLN 171
Query: 201 MHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEALSMSYLGPDYSQTKE 260
+ S++V ++R L + + S ER ++ E L+ S ++ K
Sbjct: 172 DEGIKSMLVNEYRRYLDRRM--DELVEVSLYDPDERMKILS-TELLTNS------TRCKR 222
Query: 261 FGEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFW 320
S+K+ ++ FPLC++ + +L+ + HLK+ R L LFLK G+ ++D + F+
Sbjct: 223 NISFSLKESEKY----FPLCIQIIMQRLKRNRHLKYNDRQILCLFLKDCGMNVDDGIDFF 278
Query: 321 KAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQKIISSTPGVGDHHGCPYRHF 380
++ F KVG E FDKEY YSIRHNYG EGKR +Y+ ++C K I++T CP+
Sbjct: 279 RSSF--KVGREVFDKEYLYSIRHNYGLEGKRANYSCFTCSK-IANTTNEERRSSCPFIED 335
Query: 381 SEENLRAALGRMGVGSRAMEDVVDKVRNRHYQLACTLTFEAVHSSSCDAGINHPNQYF 438
E ++ A G +EDV+D + CT E + + + P +Y+
Sbjct: 336 KEYVMKLAEGMEA----DIEDVMD---GGTFNGKCTRLLEKLTRKKQEKLVVTPIRYY 386
>gi|156402241|ref|XP_001639499.1| predicted protein [Nematostella vectensis]
gi|156226628|gb|EDO47436.1| predicted protein [Nematostella vectensis]
Length = 332
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 100/318 (31%), Positives = 154/318 (48%), Gaps = 32/318 (10%)
Query: 59 KRPEEMENLVRDLWKANMRHPEAS-----EDVNKDIISHFVLRLVYCRTEDLRKWFLSME 113
K + + + + L+ +NM +++ +D KD ISHF+LRL YCR+EDLR+WFL E
Sbjct: 24 KMSKHLSDFLPHLYISNMYSSKSTANDEYDDKRKDHISHFILRLAYCRSEDLRRWFLLQE 83
Query: 114 TALYRYRFLLGSSEAKRALMEEF----DLPCKAISRTEFENAKEKLEQVARSFDQPLPTA 169
+ L+R+RF+ +E + +EEF L I E EKL + A
Sbjct: 84 SELFRFRFV---TEEEGKGVEEFLQHNSLSYTPIGEEEKTTFLEKLRDSGYNLTDAAVLA 140
Query: 170 DAIFYKVPFEEVPELVAGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTS 229
+YKV F E +LV R+V++ +G AY+ +VS++ FR+ LS AL ++
Sbjct: 141 SK-YYKVHFTEALDLVRSRKVFLREGSAYIPHQSLVSIITNVFRTQLSHALAVSIIVLCL 199
Query: 230 TIREQERDR-------LTPIVEALSMSY---LGPDY-SQTKEFG-EISIKDLDQLARSSF 277
D+ TP + L P Y S + EF E S+K + + +
Sbjct: 200 PFNGPSTDQGGFHAIIETPCNHGEDKGFPEILPPVYASASPEFEREPSLKAW--WSYAIW 257
Query: 278 PLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWKAEFSQK--VGAERFDK 335
L + F+ L++ GL G GL + F+ +++ K + +FDK
Sbjct: 258 TLSQGYWFNPGGVSGILENRVHKDNGL---GQGLPRQPFNPFYSSDYHYKRIIQYFQFDK 314
Query: 336 EYAYSIRHNYGKEGKRTD 353
+YAY+IRHNYGKEGKR D
Sbjct: 315 QYAYNIRHNYGKEGKRAD 332
>gi|429964844|gb|ELA46842.1| hypothetical protein VCUG_01686 [Vavraia culicis 'floridensis']
Length = 388
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 91/354 (25%), Positives = 159/354 (44%), Gaps = 32/354 (9%)
Query: 87 KDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRF-LLGSSEAKRALMEEFDLPCKAISR 145
+D +SHF+ RL+ C +WF++MET L+R R SE K ++ K +
Sbjct: 58 EDELSHFLCRLITCSVPWASQWFIAMETKLFRTRLATYNLSEIKNFFYTKYLKRAKNLQV 117
Query: 146 TEFENAKEKLEQVARSFDQPLPTADAIFYKVPFEEVPELVAGRRVYIHKGHAYVAMHQVV 205
E + E + A + + D V F PELV RV + G+ + +V
Sbjct: 118 DEKDVFIEDGTKFAPNEEIVNSATDYHTIHVYFSRAPELVRDCRVKLKMGYFVLQDANMV 177
Query: 206 SLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEALSMSYLGPDYSQTKEFGEIS 265
+++ +FR L + + + K + +R ER L D+ T +
Sbjct: 178 AILANEFREYLQERI--DSLKANTCLRNDER-----------FGNLAIDFFSTPQKSTGQ 224
Query: 266 IKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWKAEFS 325
+K + + A P C+ + ++R D HLK+ R L +LK GL ++D + F + F+
Sbjct: 225 LKSMLECA----PPCIGLITKRMRCDRHLKYNDRQILIRYLKECGLPVDDCVEFLRNNFA 280
Query: 326 QKVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQKIISSTPGVGDHHGCPYRHFSEENL 385
RFD+E+ Y +RHNYG EGKR Y+ Y+C ++++ CP+ S+ +
Sbjct: 281 --CDPVRFDREFVYVVRHNYGLEGKRASYSCYTCPQVVA-------MGACPFT--SKSVV 329
Query: 386 RAALGRMGVGSRAMEDVV-DKVRNRHYQLACTLTFEAVHSSSCDAGINHPNQYF 438
+ L G + +ED V ++ R+Y C + S+ + + P ++
Sbjct: 330 KEYLDENGF--QDIEDAVFSEIEKRNYTKGCGTLLKYRKKSAEEVAVTSPFMFY 381
>gi|328863548|gb|EGG12647.1| hypothetical protein MELLADRAFT_54439 [Melampsora larici-populina
98AG31]
Length = 257
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 129/238 (54%), Gaps = 20/238 (8%)
Query: 21 LPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEEMENLVRDLWKANM---R 77
L Y P ++ ++ FE +A++RL+VL I + L+R + EE++ ++ + K +
Sbjct: 33 LNFYSQPPTTDITIDQFETWAINRLKVLAEIENGLSRNRSFEELKPILTNRCKECLPLSA 92
Query: 78 HPEASEDVNK----DIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKRALM 133
+ S D++ D SH++LRL +CR+E+LR F++ ET L+++RF + + +
Sbjct: 93 NTAKSVDLDSQRKIDHYSHYILRLAFCRSEELRSRFVNAETLLFKFRFETEDTLERIKFI 152
Query: 134 EEFDLPCKAISRTEFENAKEKLEQVARSFDQPLPTADAIFYKVPFEEVPELVAGRRVYIH 193
+ + + + E + K ++ P D +YKV + +VP+LV+ R+VY+
Sbjct: 153 PSIKIDWQQVDQNEVTHIKTMMKD---------PNEDT-YYKVRWTKVPDLVSSRKVYLK 202
Query: 194 KGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEALSMSYL 251
G+AYV+ S++ +F S L KAL +T++ E RL P++E LS+++L
Sbjct: 203 AGYAYVSSKDQASIIFQEFSSRLKKALEITSKHLPDL---DEDSRLLPVLEHLSLNFL 257
>gi|440290074|gb|ELP83528.1| DNA primase large subunit, putative [Entamoeba invadens IP1]
Length = 539
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 97/372 (26%), Positives = 166/372 (44%), Gaps = 54/372 (14%)
Query: 105 LRKWFLSMETALYRYRFLLGSSEAKRALMEEFDLPCKAISRTEFENAKEKLEQVARSFDQ 164
L +F+ E +L+ R S E + ++D + I+ E E+ + F
Sbjct: 147 LASYFVQSEMSLFAQRIATISMEGLDGYLRQYDYHPQPITDVENVFLNEQ-----KYFAL 201
Query: 165 PLPTADAIFYKVPFEEVPELVAGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALI-LT 223
PL KVPF E + R + + G A+++ +++ LV ++R + + + +
Sbjct: 202 PL-------VKVPFYEAGKFFRTRELLLRDGFAFISKQEIIDLVTLKYRGKIQEIIKEMG 254
Query: 224 NRKWTSTIREQERDRL------TPIVEALSMSYLGPDYSQTKEFGEISIKDLDQLARSS- 276
N + + + L P+V+++S Y+Q E SI++ AR S
Sbjct: 255 NADLMAKVPTELHPMLQFYMDNVPMVKSISEK----GYAQ----AECSIEE----ARESL 302
Query: 277 --FPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWKAEFSQKVGAERFD 334
F C ++ + + + HLKH G++QL LFLKG+GL M+ + ER D
Sbjct: 303 GMFAPCAFSIYRRFKREKHLKHFGKLQLVLFLKGMGLDMDGTKKYIDE-------VERLD 355
Query: 335 KEYAYSIRHNYGKEGKRTDYTPYSCQKIISSTPGVGDHHGCPYR--HFSEENLRAALGRM 392
K+ Y+I H YGK G + DY+ Y C ++S VGD GC FS++++R L +
Sbjct: 356 KDAIYAIEHAYGKVGGKKDYSSYGCVGLMSHNRNVGDCDGCIMNTLKFSKDDVRNNLKDL 415
Query: 393 ----GVGSR----AMEDVVDKVRNRHYQLACTLTFEAVHSSSCD---AGINHPNQYFSDS 441
GV EDV++ V + ACT ++ + + I HPN Y+
Sbjct: 416 LDFRGVEGNERESIYEDVMNSVDAKLPMQACTKLLCLLNGKAWNEEVPEIAHPNNYYRRF 475
Query: 442 HKILQPKNNNAA 453
K++ KN ++
Sbjct: 476 KKMVNEKNRDSV 487
>gi|326429483|gb|EGD75053.1| hypothetical protein PTSG_06710 [Salpingoeca sp. ATCC 50818]
Length = 585
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 86/258 (33%), Positives = 122/258 (47%), Gaps = 32/258 (12%)
Query: 176 VPFEEVPELVAGR--RVYIHKGHAYVAMHQVVSLVVTQFRSNLS-KALILTNRKWTSTIR 232
VPFE L+ R + +H+G +V V S+V S L+ A L+ T
Sbjct: 260 VPFEVATHLLRRRDPAIMLHRGQCFVPAEHVASVVHRLASSALTASAQPLSYLVKTIEYD 319
Query: 233 EQERDRLTPIVEALSMSY---LGPDYSQTKEFGEISIKDLD--QLARSSF-------PLC 280
ER R+ P++ ++++ L P ++ +KD +L R F P C
Sbjct: 320 AHERARMLPLLRRVAVAIEENLVPRPAE-------PLKDAPACKLNRVEFEANVHMTPPC 372
Query: 281 MRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWKAEFSQKVGAERF-DKEYAY 339
M HL KLR HHLKH R+ L LFLKG GL +++ A EF + + AE K+Y Y
Sbjct: 373 MHHLLTKLRTTHHLKHQDRLPLILFLKGAGLAVKETQALLLREFRKAMSAEVLRRKKYEY 432
Query: 340 SIRHNYGKEGKRTDYTPYSCQKIISSTPGVGDHHGCPYRHFSEENLRAALGRM--GVGSR 397
SIRH YG EG R D P+ C K++ D+H CP++H L L + G+ S
Sbjct: 433 SIRHLYGLEGSRIDRQPFECTKMMQ------DYH-CPFKHHDARALHHLLQTIAPGLPSP 485
Query: 398 AMEDVVDKVRNRHYQLAC 415
A D+ + YQ AC
Sbjct: 486 AWWDIKAAAKRGQYQAAC 503
>gi|294882130|ref|XP_002769622.1| dna primase large subunit, putative [Perkinsus marinus ATCC 50983]
gi|239873174|gb|EER02340.1| dna primase large subunit, putative [Perkinsus marinus ATCC 50983]
Length = 353
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 127/282 (45%), Gaps = 50/282 (17%)
Query: 181 VPELVAGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLT 240
+ EL+A R V I G AY+ Q+ +L+ +R L + L + ++ T + + R+
Sbjct: 101 LAELIAKRAVVIIGGMAYIPDTQLGTLLCKTYREQLRRHLAIALQERTVFMNDP---RIA 157
Query: 241 PIVEALSMSYL---GPDYSQTKEFGEISIKDLDQLARSSFPLCMRHLFDKLR-EDHHLKH 296
IV+ + +Y G + + ++S+ + + L SFP CMR L + +R + HLKH
Sbjct: 158 SIVKHMHPTYRPSNGNNMDNIPDSEKLSLDNFNLLLERSFPPCMRSLIEHMRHKKTHLKH 217
Query: 297 GGRMQLGLFLKGVGLRMEDALAFWKAEFS--QKVGAERFDKEYAYSIRHNYGKEGKRTDY 354
GR QL FL+ GL M+D+L ++K EF+ Q + ++FD+ Y+Y I+ + +
Sbjct: 218 RGRQQLPPFLRSAGLNMDDSLRWFKTEFTRDQSIDPDKFDRHYSYDIKWTLSNWAETGGF 277
Query: 355 TPYSCQKIISSTPGVGDHHGCPYRHFSEENLRAALGRMGVGSRAMEDVVDKVRNRHYQLA 414
P +I D + K R QLA
Sbjct: 278 QPQQTAIMI-------------------------------------DDITKKSKREAQLA 300
Query: 415 CTLTFEAVHSSSCDAGI-NHPNQYFSDS---HKILQPKNNNA 452
C F +H S G+ NHPN YFS+S H K+NNA
Sbjct: 301 CQEWFRIMHPGSSGDGVGNHPNSYFSESIAYHLEKDGKSNNA 342
>gi|302404730|ref|XP_003000202.1| DNA primase large subunit [Verticillium albo-atrum VaMs.102]
gi|261360859|gb|EEY23287.1| DNA primase large subunit [Verticillium albo-atrum VaMs.102]
Length = 413
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/246 (33%), Positives = 120/246 (48%), Gaps = 16/246 (6%)
Query: 21 LPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEEMENLVRDLWKANMRHPE 80
L Y P ++ LE FE +A+DRLR+L + R K P E+ + ++ L +
Sbjct: 38 LNFYADPPTADITLEQFEQWAIDRLRILAELEACSFRNKPPAEVASHMKPLLDKLLPLES 97
Query: 81 ASEDV-------NKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKRALM 133
+S KD SHF+LRL + TEDLR+ F +ET L+R RF + A +
Sbjct: 98 SSSQSSQLFAQRQKDHYSHFILRLAFASTEDLRRRFSRVETMLFRLRFNSDDLADRSAFV 157
Query: 134 EEFDLPCKAISRTEFENAKEKLEQVARSFDQPLPTA-----DAIFYKVPFEEVPELVAGR 188
+L + TE E A E A + + D ++KV + VPELV R
Sbjct: 158 AGLELDWWE-TVTEDERAALSSELAAMMPARAKASGSHNPEDETWFKVDWARVPELVEQR 216
Query: 189 RVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEALSM 248
RV + G AYV + S+V+ +F L K L LT R + R E DRLTPI++ LS
Sbjct: 217 RVLLRAGKAYVPAREQASMVLGEFTQRLEKQLELTAR---ALPRLDEDDRLTPILDHLSK 273
Query: 249 SYLGPD 254
+++ PD
Sbjct: 274 NFITPD 279
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 49/95 (51%), Gaps = 13/95 (13%)
Query: 361 KIISS-TPGVGDHHGCPYRHFSEENLRAALGRMGVGSRA-MEDVVDKVRNRHYQLACTLT 418
KI++ PG G+ HGCPYRHF ENL A +G MGV R ++ V + + + +A + +
Sbjct: 301 KILTEHPPGPGEAHGCPYRHFDLENLNALMGGMGVTERGVLQGVREDKEGQRFHMASSSS 360
Query: 419 FE-----------AVHSSSCDAGINHPNQYFSDSH 442
A +S+ I HPN+YF S+
Sbjct: 361 TSTSRKSKRQRTTASFTSAQLETIVHPNEYFKRSY 395
>gi|300706879|ref|XP_002995673.1| hypothetical protein NCER_101366 [Nosema ceranae BRL01]
gi|239604863|gb|EEQ82002.1| hypothetical protein NCER_101366 [Nosema ceranae BRL01]
Length = 406
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 103/447 (23%), Positives = 180/447 (40%), Gaps = 80/447 (17%)
Query: 18 VSTLPLYRYAPQL---EVRLEDFEVFAMDRLRVLKGISDALARGKRPEEMENLVRDLWKA 74
+ LPL + L + ++F DRL++LK +
Sbjct: 7 IKKLPLPNFYTSLLKYKFNYDEFVKLFNDRLKILKDV----------------------K 44
Query: 75 NMRHPEASEDVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYR---------FLLGS 125
N H D SHF+ RL+ +WF++ ET+L+RYR F +
Sbjct: 45 NKNHCTDKMSTVDDDSSHFITRLIVVGDSKATRWFINCETSLFRYRIKNREYDYNFKICL 104
Query: 126 SEAKRALM--------EEFDLPCKAISRTEFENAKEKLEQVARSFDQPLPTADAIFYKVP 177
+L +D+ + S F N +E L + D V
Sbjct: 105 PSCSNSLKIDPLFSTSTNYDI---SFSDKHFTN-REDLRTESNFLHVKKSKQDDKLL-VH 159
Query: 178 FEEVPELVAGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERD 237
F V +L+A R + KG+ + + Q L+V+ F+ L + ++ + + + +
Sbjct: 160 FSRVSQLLANRSIIPMKGYTTLDIKQRDVLIVSYFKHELEIKM----QRLKNLYQNEPDE 215
Query: 238 RLTPIVEALSMSYLGPDYSQTKEFGEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHG 297
RL + + ++ TK + S + ++ FP C+ + LR + HL++
Sbjct: 216 RLDKLRNLIYIN------EPTKFTDKSSCIEHEKF----FPPCITKMLHLLRINRHLRNN 265
Query: 298 GRMQLGLFLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTDYTPY 357
R L LFLK + + +E+ + ++ F+ V + FDK Y Y+IRH YG EGK+ +Y Y
Sbjct: 266 DRQALSLFLKDINVPLEETIEIFRNGFN--VTRDIFDKTYLYNIRHAYGLEGKKANYAAY 323
Query: 358 SCQKIISSTPGVGDHHGCPY---RHFSEENLRAALGRMGVGSRAMEDVVDKVRNRHYQLA 414
+C K ++S + CP+ + F + + + + ++ E
Sbjct: 324 NCAK-MASLKNSQNKSMCPFLDDKEFISSKYKFDIEEVYIKTKCTE-------------R 369
Query: 415 CTLTFEAVHSSSCDAGINHPNQYFSDS 441
CT E +S D+ IN P QYF S
Sbjct: 370 CTKILEFSINSHVDSVINTPLQYFITS 396
>gi|342184015|emb|CCC93496.1| putative DNA primase large subunit [Trypanosoma congolense IL3000]
Length = 574
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 103/406 (25%), Positives = 173/406 (42%), Gaps = 58/406 (14%)
Query: 84 DVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKR----ALMEEFDLP 139
D+++D++SH + R V+C +E RKWF+ E L R R L ++ + +LM+ LP
Sbjct: 142 DMDEDVLSHRLARFVFCMSERWRKWFVRTEETLLRARLRLQLAKCETDFLPSLMKLNGLP 201
Query: 140 CKAI--SRTEFENAKEKLEQVARSFDQPLPTADAIFYKVPFEEVPELVAGRRVYIHKGHA 197
C + + + E ++ + A + +Y VP R V +GHA
Sbjct: 202 CDPLFEEQRQDERVQKYIVYYATLCGKGQSRNADEYYSVPLALATRFDKTRSVLCFRGHA 261
Query: 198 YVAMHQVVSLVVTQFRSNLSKAL---ILTNRKWTSTIREQERDRLTPIVEALSMSYLGPD 254
+ QV + VT F S L+K L L+ K +S + ERD + ++
Sbjct: 262 ILHREQVQEVFVTMFLSKLNKGLHEAYLSRMKLSSHEDDDERDLIMKMLXXXXXXXXXXX 321
Query: 255 ------------YSQTKEFGEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQL 302
Y+ + G+ + + R +C+ L M+
Sbjct: 322 XXXXXXERENTCYTIHRSEGKGNESTGEHSRRKKPFICIFIL---------------MEE 366
Query: 303 GLFLKGVGLRMEDALAFWKAEFSQKVGA------ERFDKE-YAYSIRHNYGKEGKRTDYT 355
LFL +GL M+D+L + + S K G+ E F K Y Y+ NYG EG++T Y+
Sbjct: 367 NLFLGTIGLSMQDSLTLFSSLLSLKAGSAGGGDPEAFAKSSYGYNTTQNYGMEGRKTSYS 426
Query: 356 PYSCQKIISSTPGVG--DHHGCPYRHFSEENLRAALGR------------MGVGSRAMED 401
SC +++ P V D HGCP+R +E R L + + + + +ED
Sbjct: 427 SMSCTSLLALPPMVDKFDCHGCPFRFKNEGAFRGMLLKEQLNPLGKDYPPVKLLASDIED 486
Query: 402 VVDKVRNRHYQLACTLTFEAVHSSSC-DAGINHPNQYFSDSHKILQ 446
+V + +HY AC F A H + D P +Y++ S ++ +
Sbjct: 487 IVQDCKGQHYTRACYKYFMATHPGAKRDTLFRSPYEYYAVSSEMAE 532
>gi|340716332|ref|XP_003396653.1| PREDICTED: DNA primase large subunit-like [Bombus terrestris]
Length = 227
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 49/135 (36%), Positives = 77/135 (57%), Gaps = 9/135 (6%)
Query: 260 EFGEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAF 319
++G I+ K++D + +FPLCM+HL KLR H L H R LFLK G+++EDA+ +
Sbjct: 35 KYGNITKKNID-IEIKNFPLCMQHLHTKLRTTHRLSHYARFYYSLFLKDGGMKLEDAINY 93
Query: 320 WKAEFSQKVGA--------ERFDKEYAYSIRHNYGKEGKRTDYTPYSCQKIISSTPGVGD 371
WK E+S+ + ++++ YSIRH YG EG R +Y +C+ I +T
Sbjct: 94 WKEEYSKPHSCSSSCLHNWKSNERKFMYSIRHLYGLEGSRKNYKSPTCELICMNTSNPMY 153
Query: 372 HHGCPYRHFSEENLR 386
GCP+++F L+
Sbjct: 154 EGGCPFKNFDVNTLK 168
>gi|241648014|ref|XP_002410007.1| DNA primase large subunit, putative [Ixodes scapularis]
gi|215501499|gb|EEC10993.1| DNA primase large subunit, putative [Ixodes scapularis]
Length = 449
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 100/392 (25%), Positives = 168/392 (42%), Gaps = 41/392 (10%)
Query: 63 EMENLVRDLWKANMRHPEASEDVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFL 122
++E + R L + + H E +D++SHFV+R V + + E L+RYRF
Sbjct: 37 DVEAIRRVLEQDDTCHECLHEGTTEDLVSHFVVRSVLVTQRSALEHVVRAEAMLFRYRFE 96
Query: 123 LGSSEAKRALM----EEFD--LPCKAISRTEFENAKEKLEQVARSFDQPLPTADAIFY-- 174
S + K ++ EE L CK ++ + LE + + D D I +
Sbjct: 97 RLSWDEKWGILGHIREEVQSTLGCKLA-----QDYRNVLETLTKVLDAMFGKWDDISHDR 151
Query: 175 ----KVPFEEVPELVAGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTST 230
+VPFE LV+ R V +++G A V + L+ F L + + R ++
Sbjct: 152 EFEVQVPFEHALSLVSTRSVTLNRGIATVMTPFLGQLLTCLFEETLRRGIEHFGR--SAN 209
Query: 231 IREQERDRLTPIVEALSMSYLGPDYSQTKEFGEISIKDLDQLARSSF--PLCMRHLFDKL 288
R+ +D+ + + + +S G + Q+A SF P CM ++ L
Sbjct: 210 FRQLFQDKRMAELANVLQDLVSKKHSHQVGRGLLL---WSQVAAESFWFPPCMAKMYSML 266
Query: 289 REDHHLKHGGRMQLGLFLKGVGLRMEDALAFWKAEFSQKV--------GAERFDKEYAYS 340
++ L H R +L LFLK +GL + ++L W +SQ+ G + +++ YS
Sbjct: 267 LRENRLPHEDRFRLTLFLKELGLPVSESLLLWGHFYSQRPGRGATCGHGWQTHNRQLRYS 326
Query: 341 IRHNYGKEGKRTDYTPYSCQKIISSTPGVGDHHGCPYRHFSEENLRAALGRMGVGSRAME 400
+ H YG EG R DYT + C+++ + DH CP+ + G + V ME
Sbjct: 327 VCHMYGLEGARKDYTAHGCRQLQDT-----DH--CPFVAGAGPGDFGTDGSLSVAD--ME 377
Query: 401 DVVDKVRNRHYQLACTLTFEAVHSSSCDAGIN 432
D+ R+ AC L C GI+
Sbjct: 378 DLGRLCRDGRASAACRLHLVRSARPLCPEGID 409
>gi|361124936|gb|EHK97000.1| putative DNA primase large subunit [Glarea lozoyensis 74030]
Length = 1056
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 96/200 (48%), Gaps = 11/200 (5%)
Query: 21 LPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEEMENLVRDLWKANMRHPE 80
L Y P ++ LE FE +A+DRLR L P L +
Sbjct: 38 LNFYVTPPTADITLEQFEQWAIDRLRETAAHMKPLLDKYLP---------LTSSTSNSAA 88
Query: 81 ASEDVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKRALMEEFDLPC 140
+ KD SHF+LRL + TEDLR+ F ET L+R RF S ++ +E +L
Sbjct: 89 TQIERQKDHYSHFILRLAFASTEDLRRRFSRAETTLFRIRFQDNDSRERQKFVEGLNLDL 148
Query: 141 KAISRTEFENAKEKLEQVARSFDQPLPTADAIFYKVPFEEVPELVAGRRVYIHKGHAYVA 200
+ +S E E+L F P + +YKV +E+VPEL+ RRV++ G AYV
Sbjct: 149 EIVSDEERREYAEELRAAGGGF--PKRIEEESYYKVDWEKVPELIEHRRVFLKGGKAYVP 206
Query: 201 MHQVVSLVVTQFRSNLSKAL 220
+ +S+V+ +F + L KAL
Sbjct: 207 GREQLSMVIAEFTNKLDKAL 226
>gi|410057503|ref|XP_001175148.3| PREDICTED: DNA primase large subunit-like, partial [Pan
troglodytes]
Length = 162
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/117 (41%), Positives = 65/117 (55%), Gaps = 23/117 (19%)
Query: 330 AERFDKEYAYSIRHNYGKEGKRTDYTPYSCQKII-SSTPGVGDHHGCPYRHFSEENLRAA 388
+FDK Y+Y+IRH++GKEGKRTDYTP+SC KII S+ P GD+HGCP+RH E L+
Sbjct: 14 PNQFDKGYSYNIRHSFGKEGKRTDYTPFSCLKIILSNPPSQGDYHGCPFRHSDPELLKQK 73
Query: 389 LGRMGVGSRAMEDVVDKVRNRHYQLACTLTFEAVHSSSCDAGINHPNQYFSDSHKIL 445
L + + V D C +NHPNQ+F +S +IL
Sbjct: 74 LQSYKISPGGISQVDD----------------------CGFSLNHPNQFFCESQRIL 108
>gi|328699285|ref|XP_003240892.1| PREDICTED: DNA primase large subunit-like [Acyrthosiphon pisum]
Length = 424
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 134/280 (47%), Gaps = 14/280 (5%)
Query: 175 KVPFEEVPELVAGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQ 234
+VP+++ LV+ R+V++ +G A V +Q SL+V FR K+L R ++
Sbjct: 142 EVPWQKCTTLVSKRKVHLTQGIAVVLCNQWNSLLVDLFRLIYIKSLHKIRRSMSAL--HN 199
Query: 235 ERDRLTPIVEALSMSYLGPDYSQTKEFGE-ISIKDLDQLARSSFPLCMRHLFDKLREDHH 293
+ + E L+ SY + K E IS+++L+ L + P CM + L +H
Sbjct: 200 TNLQCEYLNEKLN-SYYNSKIAFWKNIDEQISLEELN-LNKILLPPCMLMSLNSLFTNHR 257
Query: 294 LKHGGRMQLGLFLKGVGLRMEDALAFWKAEFSQ-----KVGAERFD---KEYAYSIRHNY 345
L H R +L LFLK +G+ +++ L ++ E+S+ +D K+ Y++RH Y
Sbjct: 258 LAHDPRYRLTLFLKDIGVSLDETLKIFQQEYSKCGNLKSTCTHSWDDHKKQIEYNVRHTY 317
Query: 346 GKEGKRTDYTPYSCQKIISSTPGVGDHHGCPYRHFSEENLRAALGRMGVGSRAMEDVVDK 405
G G + +Y +C + V D CP+ H SE+ L++ L + ++++
Sbjct: 318 GMVGSKKNYQMTTCVLMQKQNIQVSDEGCCPFVHCSEDKLKSILEEFTSINDIEMNILND 377
Query: 406 VRNRHYQL-ACTLTFEAVHSSSCDAGINHPNQYFSDSHKI 444
++N + AC + + S N P QYF +S K+
Sbjct: 378 LKNSDQPIQACHWYAQKLFPVSEPLCHNTPTQYFFNSKKV 417
>gi|300121645|emb|CBK22163.2| unnamed protein product [Blastocystis hominis]
Length = 141
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 74/123 (60%)
Query: 281 MRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYS 340
M+ ++ L + HHL + GR QLG FL+G+GL +E ALAF++ +F+ K+ E+F ++YAY+
Sbjct: 1 MKAMYLHLCKTHHLFYDGREQLGRFLRGIGLSVEGALAFFQQQFTAKLSVEKFTRQYAYN 60
Query: 341 IRHNYGKEGKRTDYTPYSCQKIISSTPGVGDHHGCPYRHFSEENLRAALGRMGVGSRAME 400
IR+ YG EG+R C ++ + P HGCP+ + + L L + V A+
Sbjct: 61 IRYLYGLEGRRVPLNALPCSVMMKTRPTGQQCHGCPFVYMQDAALEQLLRTLRVREEAIG 120
Query: 401 DVV 403
++V
Sbjct: 121 NIV 123
>gi|255078876|ref|XP_002503018.1| predicted protein [Micromonas sp. RCC299]
gi|226518284|gb|ACO64276.1| predicted protein [Micromonas sp. RCC299]
Length = 623
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 74/127 (58%), Gaps = 4/127 (3%)
Query: 251 LGPDYSQTKEFGEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVG 310
LGPD K + + + +A +P C+R L + HLKH R QL LFLKG
Sbjct: 348 LGPD---AKRVLRVLRRGVKGVAARPYPPCVRRHLQTLHRERHLKHHSRWQLTLFLKGAD 404
Query: 311 LRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQKIISSTPGVG 370
+ +++ALA W+++FS A+ F +E+ Y++RH++G EGK DY P++C+++ ++
Sbjct: 405 MSVDEALAVWRSQFSHGKMAD-FQREHTYAVRHSFGLEGKMADYPPHTCERLGKNSARGD 463
Query: 371 DHHGCPY 377
GCP+
Sbjct: 464 GEPGCPF 470
Score = 41.2 bits (95), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 79/196 (40%), Gaps = 18/196 (9%)
Query: 34 LEDFEVFAMDRLRVLKGISDALARGKRPEEMENLVRDLWKANMRHPEASEDVNKDIISHF 93
L + E A +RL+VL + A RP + E+L+ + R E E V S
Sbjct: 13 LGELEDAAKERLKVLHQLDAAWL--SRPWD-EDLLDRISAGLFRGDERGERV-----STA 64
Query: 94 VLRLVYCRTEDLRKWFLSMETALYRYRFLLGSS---EAKRALMEEFDLPCKAISRTEFEN 150
+RL +C E R+W E+ L R LG + + +RA E + +
Sbjct: 65 AVRLAFCHHEASRRWLAEQESRLLSSRIRLGETSLADVERATAEMDRHDANDDDDGDDGS 124
Query: 151 AKEKLEQVARSFDQPLPTADAIFYKVPFEEVPELVAGRRVYIHKGHAYVAMHQVVSLVVT 210
L F P P +A +PFE L+ R V + +G A V ++ +++
Sbjct: 125 HSRAL------FGTP-PPPEANHRWIPFERAAPLLRRRDVRLCRGWASVPEDRMRDVLIA 177
Query: 211 QFRSNLSKALILTNRK 226
+ L K L T R+
Sbjct: 178 TYADKLVKELETTRRR 193
>gi|308159839|gb|EFO62357.1| DNA pol/primase, large sub [Giardia lamblia P15]
Length = 539
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 139/301 (46%), Gaps = 49/301 (16%)
Query: 185 VAGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVE 244
+A +RV G +A ++SL++ +F A+ ++ +++ + + ++E
Sbjct: 242 LAAKRVPCVAGMFLLAAEDLISLLLIKF-----AAIYKASQSICASVSDIRIPQFAELLE 296
Query: 245 ALSMSYLGPDYSQTK----EFGEISIKDLDQLARS-SFPLCMRHLFDKLREDHHLKHGGR 299
L + + + + K E ++S K++D R+ P CM + + L+ ++ LK+ R
Sbjct: 297 ILRQTRIDSNSLEAKVQLDEDRKLSRKNIDAAIRAGCIPPCMLYCINGLKANNRLKYQAR 356
Query: 300 MQLGLFLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSC 359
+QL F G+ ED L + K+ +++ + E+F++EYAY+I+H +GK G R C
Sbjct: 357 LQLTSFFNSCGMSCEDDLEYQKSFYTRVIPEEKFNREYAYNIKHIHGKVGGRKPTMCRGC 416
Query: 360 QKIISSTPGVGDH-------HGCPYRHFSEEN------LRAALG---RMGVGSRAMED-- 401
I + P +GD HGCP+ H ++N L+ L R+ R +ED
Sbjct: 417 NTIGTLVP-IGDRSGQQLEVHGCPFVHMYDKNAGDPTRLKTFLQNNYRVTAYERDIEDKI 475
Query: 402 ---------------VVDKVRNRHYQLACTLTFEAVHSSSCDAGIN--HPNQYFSDSHKI 444
+ +R ++AC FE VH D I+ HP ++F +S I
Sbjct: 476 LCAVSNHQDKGWLGYITAPLREGEPKVACNHLFELVHG---DVRIDLMHPVKFFKESTNI 532
Query: 445 L 445
+
Sbjct: 533 V 533
>gi|159118176|ref|XP_001709307.1| DNA pol/primase, large sub [Giardia lamblia ATCC 50803]
gi|157437423|gb|EDO81633.1| DNA pol/primase, large sub [Giardia lamblia ATCC 50803]
Length = 539
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 76/301 (25%), Positives = 137/301 (45%), Gaps = 49/301 (16%)
Query: 185 VAGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVE 244
+A +RV G +A ++SL++ +F A+ ++ +++ + + ++E
Sbjct: 242 LAAKRVPCVAGMFLLAAEDLISLLLIKF-----TAIYKASQSICASVSDIRIPQFAELLE 296
Query: 245 ALSMSYLGPDYSQTK----EFGEISIKDLDQLARSS-FPLCMRHLFDKLREDHHLKHGGR 299
L + + + + K E ++S K++D R+ P CM H + L+ ++ LK+ R
Sbjct: 297 ILRQTRIDSNSLEAKVQLDEDRKLSRKNIDAAIRAGCIPPCMLHCINGLKANNKLKYQAR 356
Query: 300 MQLGLFLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSC 359
+QL F G+ ED L + K+ +++ + E+F +EYAY+I+H +GK G R C
Sbjct: 357 LQLTSFFNSCGMSCEDDLEYQKSFYTRVIPEEKFTREYAYNIKHIHGKVGGRKPAMCRGC 416
Query: 360 QKIISSTPGVGDH-------HGCPYRHFSEEN------LRAALG---RMGVGSRAMED-- 401
I + P GD HGCP+ H ++N L+ L R+ R +ED
Sbjct: 417 NTIGTLVP-TGDRSGQQLEVHGCPFVHMYDKNTGDPTRLKTFLQNNYRVTAYERDIEDKI 475
Query: 402 ---------------VVDKVRNRHYQLACTLTFEAVHSSSCDAGIN--HPNQYFSDSHKI 444
+ +R ++AC FE VH D I+ HP ++F +S I
Sbjct: 476 LCAVSNHQDKGWLGYITAPLREGEPKVACNHLFELVHG---DVRIDLMHPVKFFKESTNI 532
Query: 445 L 445
+
Sbjct: 533 V 533
>gi|405960207|gb|EKC26148.1| Ras-related protein Rab-5B [Crassostrea gigas]
Length = 818
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/152 (34%), Positives = 77/152 (50%), Gaps = 22/152 (14%)
Query: 281 MRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWKAEFSQK------------- 327
M L L+ +H L H R+QL LFLK +G+ +++AL FWK ++S
Sbjct: 1 MSVLLHSLQTNHQLHHHSRVQLTLFLKEIGMPVQEALQFWKHQYSMAPHGDPRSGCGPKW 60
Query: 328 VGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQKIISSTPGVGDHHGCPYRHFSEENLRA 387
VG ER Y YSIRH YG EG + +Y + C + P G + GCP++HF + A
Sbjct: 61 VGKER---RYTYSIRHLYGLEGSQVNYRAHCCASLQEFIPPCGSNGGCPFKHFDD----A 113
Query: 388 ALGRMGVGSRAME--DVVDKVRNRHYQLACTL 417
ALG++ ME D++ + AC+L
Sbjct: 114 ALGQLLQSEDIMETTDILALRAENQFSCACSL 145
>gi|298709828|emb|CBJ31626.1| similar to DNA primase large subunit, partial [Ectocarpus
siliculosus]
Length = 481
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 85/176 (48%), Gaps = 11/176 (6%)
Query: 169 ADAIFYKVPFEEVPELVAGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKW- 227
+D + PFE+V LV RRV + G A ++ Q+ VV F L + L + R
Sbjct: 302 SDIGYLSCPFEKVLPLVRSRRVLLRDGKALLSPDQLPEAVVQHFEGRLREGLAIAERGLP 361
Query: 228 -------TSTIREQERDRLTPIVEALSMSYLGPDYSQTKEFGEISIKDLDQLARSSFPLC 280
+ + Q R + +V L D + I+ K++DQLA FPLC
Sbjct: 362 GVEADVRVAEVLRQVRSAVDSLVSGGGRRGLDAD---NRSMAIITRKNIDQLAEKHFPLC 418
Query: 281 MRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWKAEFSQKVGAERFDKE 336
MR LR +HHLK+ R+QL FL+ G+ +++ L W+ EF + + A+ + ++
Sbjct: 419 MRRTLRILRREHHLKYQARLQLISFLRNAGMEVDEILGLWREEFPKGMPADEYARK 474
>gi|253741527|gb|EES98395.1| DNA pol/primase, large sub [Giardia intestinalis ATCC 50581]
Length = 539
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 135/301 (44%), Gaps = 49/301 (16%)
Query: 185 VAGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVE 244
+A +R G +A ++SL++ +F A+ R ++ + + + ++E
Sbjct: 242 LATKRTPCIAGMFLIAAENLISLLLVKF-----AAIYEAPRAICESVTDIQLPQFAELLE 296
Query: 245 ALSMSYLGPDY----SQTKEFGEISIKDLDQLARSS-FPLCMRHLFDKLREDHHLKHGGR 299
L + + + Q E ++S K++D + R+ P CM + + L+ ++ LK+ R
Sbjct: 297 ILRQTRIDSNSLEANIQLDEGRKLSRKNIDTVIRAGCIPPCMVYCINGLKANNRLKYQAR 356
Query: 300 MQLGLFLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSC 359
+QL F G+ ED L + K+ +++ + E+F +EYAY+I+H +GK G R C
Sbjct: 357 LQLTSFFNSCGMSCEDDLEYQKSFYTRIMPEEKFTREYAYNIKHVHGKVGGRKSTMCSGC 416
Query: 360 QKIISSTPGVGDH-------HGCPYRHFSEEN------LRAALG---RMGVGSRAMEDVV 403
I S P GD HGCP+ H ++N L+ L R+ + +ED +
Sbjct: 417 NTIGSLVPN-GDKTGQQLEVHGCPFVHLYDKNIGDPTRLKTFLQSNYRVTAYEQDIEDKI 475
Query: 404 DKVRNRHY-----------------QLACTLTFEAVHSSSCDAGIN--HPNQYFSDSHKI 444
+ H ++AC FE VH D I+ HP ++F +S I
Sbjct: 476 ICAVSNHQDKGWLGYITAPLKEGEPKVACNHLFELVHG---DVRIDAMHPVRFFKESTDI 532
Query: 445 L 445
+
Sbjct: 533 V 533
>gi|260786479|ref|XP_002588285.1| hypothetical protein BRAFLDRAFT_86733 [Branchiostoma floridae]
gi|229273445|gb|EEN44296.1| hypothetical protein BRAFLDRAFT_86733 [Branchiostoma floridae]
Length = 410
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/187 (32%), Positives = 91/187 (48%), Gaps = 18/187 (9%)
Query: 170 DAIFYKVPFEEVPELVAGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTS 229
+ IF KVPF+ +L+ RRV +HKG AYV + ++V F L + L +
Sbjct: 235 EKIFLKVPFQYTLQLITDRRVCLHKGFAYVPSIYLPNVVANIFEECLRLGIELARKAVPV 294
Query: 230 TIREQERDRLTPIVEALSMSYLGPDYSQTKE-----FGEISIKDLDQLARSSFPLCMRHL 284
+ + R+ + L + + D + E F IS D+D+L FP CM HL
Sbjct: 295 CLSDP---RMREMFGTLQLQFY-EDGCRGGEGVGVVFDTISRHDVDRLV-DFFPPCMAHL 349
Query: 285 FDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHN 344
LR H LKH R+Q LFLK +GL + DA++FW+ E+S + H+
Sbjct: 350 HRTLRYKHRLKHFSRLQYTLFLKDLGLSVHDAVSFWQQEYSIPA--------HGGGCTHH 401
Query: 345 YGKEGKR 351
+ K+G+R
Sbjct: 402 WAKDGRR 408
>gi|387593053|gb|EIJ88077.1| hypothetical protein NEQG_01521 [Nematocida parisii ERTm3]
gi|387596235|gb|EIJ93857.1| hypothetical protein NEPG_01429 [Nematocida parisii ERTm1]
Length = 373
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/108 (42%), Positives = 60/108 (55%), Gaps = 3/108 (2%)
Query: 269 LDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWKAEFSQKV 328
L QL P C+ + DKL+E HLK+ R L FLK G+ +EDALA +KA FS V
Sbjct: 224 LMQLQTKCVPPCISGILDKLKEKRHLKYDDRSNLNNFLKAAGVPLEDALALYKAHFSCTV 283
Query: 329 GAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQKIISSTPGVGDHHGCP 376
FD++Y Y+I+H YG G R +Y C K+IS + GCP
Sbjct: 284 --TEFDRKYKYNIQHAYGLVGGRINYKSTPCSKVISDGKR-SECVGCP 328
>gi|119574513|gb|EAW54128.1| hCG1791791 [Homo sapiens]
Length = 193
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/114 (40%), Positives = 60/114 (52%), Gaps = 23/114 (20%)
Query: 333 FDKEYAYSIRHNYGKEGKRTDYTPYSCQKII-SSTPGVGDHHGCPYRHFSEENLRAALGR 391
F K +Y+I H++GKEGKRTDYTP+SC KII S+ P GD+HGCP+RH E L+ L
Sbjct: 48 FGKGCSYNICHSFGKEGKRTDYTPFSCLKIILSNPPSQGDYHGCPFRHSDPELLKQKLQS 107
Query: 392 MGVGSRAMEDVVDKVRNRHYQLACTLTFEAVHSSSCDAGINHPNQYFSDSHKIL 445
+ + V D C +NHPNQ+F +S IL
Sbjct: 108 YKISPGGISQVDD----------------------CGFSLNHPNQFFCESQSIL 139
>gi|402867358|ref|XP_003897824.1| PREDICTED: DNA primase large subunit-like, partial [Papio anubis]
Length = 117
Score = 84.3 bits (207), Expect = 1e-13, Method: Composition-based stats.
Identities = 37/59 (62%), Positives = 47/59 (79%), Gaps = 1/59 (1%)
Query: 332 RFDKEYAYSIRHNYGKEGKRTDYTPYSCQKII-SSTPGVGDHHGCPYRHFSEENLRAAL 389
+FDK Y+Y+IRH++GKEGKRTDYTP+SC KII S+ P GD+HGCP+RH E L+ L
Sbjct: 16 QFDKGYSYNIRHSFGKEGKRTDYTPFSCLKIILSNPPSQGDYHGCPFRHSDPELLKQKL 74
>gi|307196967|gb|EFN78342.1| DNA primase large subunit [Harpegnathos saltator]
Length = 147
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 62/109 (56%), Gaps = 9/109 (8%)
Query: 262 GEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWK 321
G ++I+++D + FP CMRHL L+ H L H R+ LFLK +G++++D++ FWK
Sbjct: 34 GRVTIENIDAESEK-FPPCMRHLHSILKSRHRLSHYARLYYSLFLKEIGMKLDDSITFWK 92
Query: 322 AEFSQKVGAERF--------DKEYAYSIRHNYGKEGKRTDYTPYSCQKI 362
E+S+ +K++ YSIRH YG EG R +Y C KI
Sbjct: 93 QEYSKPHACTSICSHNWQSNEKKFVYSIRHMYGLEGSRRNYKTPDCSKI 141
>gi|378755623|gb|EHY65649.1| hypothetical protein NERG_01256 [Nematocida sp. 1 ERTm2]
Length = 379
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 62/107 (57%), Gaps = 3/107 (2%)
Query: 271 QLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWKAEFSQKVGA 330
+L S P C+ + D+L+ + HLK+ R L FLK G+ +EDA+A +++ FS A
Sbjct: 233 KLQERSIPRCISGVLDRLKTNRHLKYDDRSILNNFLKAAGVPLEDAIALYRSNFS--CSA 290
Query: 331 ERFDKEYAYSIRHNYGKEGKRTDYTPYSCQKIISSTPGVGDHHGCPY 377
F+K+Y YSI+H YG G R +Y C KIIS + G + CP+
Sbjct: 291 SEFEKKYKYSIQHAYGTVGGRINYKGILCSKIISDSKK-GGCNLCPF 336
>gi|307171883|gb|EFN63525.1| DNA primase large subunit [Camponotus floridanus]
Length = 171
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 61/117 (52%), Gaps = 8/117 (6%)
Query: 281 MRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWKAEFSQKVGAERF------- 333
M+HL LR H L H R+ LFLK VG+ +ED++ FW+ E+S+
Sbjct: 1 MQHLHSVLRSRHRLSHYARLYYSLFLKEVGMELEDSIIFWRQEYSKPHTCSSVCLHNWQS 60
Query: 334 -DKEYAYSIRHNYGKEGKRTDYTPYSCQKIISSTPGVGDHHGCPYRHFSEENLRAAL 389
+K++ YSIRH YG EG R +Y C I + G GCP++ F+ + L+ L
Sbjct: 61 NEKKFIYSIRHMYGLEGSRRNYKTPDCNLICAGISGATYEGGCPFKDFNVDKLKNLL 117
>gi|6478857|dbj|BAA87287.1| Hypothetical protein [Schizosaccharomyces pombe]
Length = 128
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 73/119 (61%), Gaps = 5/119 (4%)
Query: 102 TEDLRKWFLSMETALYRYRFLLGSSEAKRALMEEFDLPCKAISRTEFENAKEKLEQVARS 161
+++LR FL E+ L+R+RF+ + ++A ++ D +++S+ E + EKL+ ++
Sbjct: 1 SDELRIRFLRAESTLFRFRFVNEETRERQAFIDSLDFQWESVSQEEKDVFYEKLQASSQR 60
Query: 162 FDQPLPTADAIFYKVPFEEVPELVAGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKAL 220
+ F+KVPF +VP+LV R V++HKG+AYV + VSLVV +F NL KAL
Sbjct: 61 -----NIENESFFKVPFFKVPDLVERRAVFVHKGYAYVPFSEQVSLVVEEFEENLKKAL 114
>gi|303278870|ref|XP_003058728.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226459888|gb|EEH57183.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 688
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 81/196 (41%), Gaps = 41/196 (20%)
Query: 267 KDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQ------------------------- 301
+ +D FPLCMR LR D HLKH R Q
Sbjct: 379 RGVDGATGRPFPLCMRRHLRDLRADRHLKHDARFQARGPIISHRFPYDRVGVVNFIPEGL 438
Query: 302 -----LGLFLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTDYTP 356
L LFLKGV + ++ LA W+A+F ++ + +E+ Y++RH YG EGK DY P
Sbjct: 439 SLPVVLTLFLKGVDVTADETLAIWRAQFPHGRMSD-YQREHTYAVRHAYGLEGKMADYPP 497
Query: 357 YSCQKIISSTPGVGDH---------HGCPYRHFSEENLRAALGRMGVGSRAMEDVVDKVR 407
++C+K+ G G RH LRA L + + + +E V
Sbjct: 498 HTCEKLSRGGAGGDGAAAACPFAAVRGLDARHRGAMALRAELAEL-IPADLVEHVASAAE 556
Query: 408 NRHYQLACTLTFEAVH 423
+ AC F+A H
Sbjct: 557 GGAPRAACARLFKATH 572
>gi|412991095|emb|CCO15940.1| DNA primase large subunit [Bathycoccus prasinos]
Length = 608
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 79/174 (45%), Gaps = 6/174 (3%)
Query: 277 FPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWKAEFSQKVGAERFDKE 336
FP CMR + D+L HL+H R +L LFLKG+GL +E+ W++ + E
Sbjct: 353 FPPCMRDVMDELHVKKHLRHFKRYELNLFLKGIGLPLEEIFKVWRSAVFPHGAMGNYQNE 412
Query: 337 YAYSIRHNYGKEGKRTDYTPYSCQKIISSTPGVGDHHGCPY----RHFSEENLRAALGRM 392
+ Y +RH +G EG+ + + C+K+I ++ CP+ + N +
Sbjct: 413 HTYQLRHVFGLEGQMKEKFEHDCEKLIKTSQMEPHAAKCPFAMPLNQYRALNANDHRWKR 472
Query: 393 GVGSRAMEDVVDKVRNRHYQLACTLTFEAVHSSS--CDAGINHPNQYFSDSHKI 444
+ A +++ KV Y+ AC F H +A + +P +F +I
Sbjct: 473 EISIDANQEIEMKVSRGDYKSACESYFSHKHKGEKMFNANVRYPTDFFDAGMEI 526
>gi|308806730|ref|XP_003080676.1| Eukaryotic-type DNA primase, large subunit (ISS) [Ostreococcus
tauri]
gi|116059137|emb|CAL54844.1| Eukaryotic-type DNA primase, large subunit (ISS) [Ostreococcus
tauri]
Length = 219
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 71/151 (47%), Gaps = 11/151 (7%)
Query: 281 MRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYS 340
MR LR D HLK+ R +L LFLKG+G + + L FW+ + + KE+ YS
Sbjct: 1 MRDQLSALRRDAHLKYADRFRLNLFLKGIGFEVGETLEFWRRGVFPRGRMAAYQKEHTYS 60
Query: 341 IRHNYGKEGKRTDYTPYSCQKIISSTPGVGDHHGCPYRHFSEENLRAA------LGRMGV 394
IRH+YG EG DYTP++C+ + + + CP+ + + R+A G +
Sbjct: 61 IRHHYGLEGAMKDYTPHNCESLGKKSE---NGRACPFVGSNVDEFRSASSSKDWFGELSF 117
Query: 395 GSRAMEDVVDKVRNRHYQLACTLTFEAVHSS 425
R ++ V+ + AC F H
Sbjct: 118 DGRVAVELA--VQAGDARCACERVFADFHGG 146
>gi|238609471|ref|XP_002397494.1| hypothetical protein MPER_02069 [Moniliophthora perniciosa FA553]
gi|215472049|gb|EEB98424.1| hypothetical protein MPER_02069 [Moniliophthora perniciosa FA553]
Length = 159
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 54/141 (38%), Positives = 77/141 (54%), Gaps = 13/141 (9%)
Query: 178 FEEVPELVAGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERD 237
+ VP+LV R++++ KG AYV + S+V +F L AL+LT + R E
Sbjct: 24 WTRVPDLVEKRKIFLKKGWAYVPAREQSSIVYQEFEDQLEAALLLTA---KALPRLDEDT 80
Query: 238 RLTPIVEALSMSYLG--------PDYSQTKEFGEISIKDLDQLARSSFPLCMRHLFDKLR 289
RL PI+ +LS +L PD + EI+ +D+LA+ FPLCMR++ LR
Sbjct: 81 RLLPILNSLSQGFLAGVSSDWVAPDREVNGD--EITADMIDELAQKHFPLCMRNMHQNLR 138
Query: 290 EDHHLKHGGRMQLGLFLKGVG 310
+D HLKH R+ GLFLK V
Sbjct: 139 KDRHLKHFERLNYGLFLKVVS 159
>gi|76155294|gb|AAX26556.2| SJCHGC07875 protein [Schistosoma japonicum]
Length = 178
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 64/115 (55%), Gaps = 14/115 (12%)
Query: 21 LPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDA---LARGKRPEEMENLVRDLWK---- 73
L Y P + L + E +A+ R+RVLK + RG + + + ++ +L K
Sbjct: 16 LQFYSCPPSQTIELSELEDYAVHRIRVLKCVETVGQDCIRGTKDYD-DKIIAELGKIGGF 74
Query: 74 ------ANMRHPEASEDVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFL 122
+ A ED++KDIISHF+L++ YCR+EDLR+WF+ E L+R+RFL
Sbjct: 75 GKIFTSCSSSLKNAKEDIHKDIISHFILQVAYCRSEDLRRWFVQQEVDLFRFRFL 129
>gi|281341028|gb|EFB16612.1| hypothetical protein PANDA_007523 [Ailuropoda melanoleuca]
Length = 155
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 76/133 (57%), Gaps = 10/133 (7%)
Query: 20 TLPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISD---ALARGKRP--EEMENLVRDL--- 71
+L Y P + L +FE A+DR+++LK + + + +G P ++EN +R L
Sbjct: 25 SLQFYLEPPSESISLIEFESLAIDRVKLLKTVENLGVSYVKGTEPYRSKLENEIRKLKFS 84
Query: 72 WKANMRHPEASEDVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKRA 131
++ N+ + E KD ISHF+LRL YC++EDLR+WF+ E L R+RF + + +
Sbjct: 85 FRENLE--DEYEPRRKDHISHFILRLAYCQSEDLRRWFIQQEMDLLRFRFSILPKDKIQN 142
Query: 132 LMEEFDLPCKAIS 144
+++ L +A+S
Sbjct: 143 FLKDSHLHFEAVS 155
>gi|395537336|ref|XP_003770659.1| PREDICTED: DNA primase large subunit-like [Sarcophilus harrisii]
Length = 157
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 63/111 (56%), Gaps = 12/111 (10%)
Query: 20 TLPLYRYAPQLEVRLEDFEVFAMDRLRVLK-----GISDALARGKRPEEMENLVRDLWKA 74
+L Y P + L +FE A++RL++LK G+S + ++EN +R K
Sbjct: 25 SLQFYLQPPSENISLAEFENLAVERLKLLKIVENLGVSYVKGSEQYQSKLENEIR---KL 81
Query: 75 NMRHPEASEDV----NKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRF 121
+ E+SED KD ISHF+LRL YC++EDLR+W + E L+R+RF
Sbjct: 82 KFSYRESSEDEFEARRKDHISHFILRLAYCQSEDLRRWLIQQEMDLFRFRF 132
>gi|407040900|gb|EKE40397.1| DNA primase large subunit, putative [Entamoeba nuttalli P19]
Length = 457
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 70/299 (23%), Positives = 124/299 (41%), Gaps = 44/299 (14%)
Query: 168 TADAIFYKVPFEEVPELVAGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKW 227
+ D +FY +PF++V +V RR + G V + ++ F S IL N K+
Sbjct: 156 SEDNLFYYIPFDKVMPMVTSRRYQMKNGLLRVPRSESDIVLSCLFFS------ILQNDKF 209
Query: 228 TSTIREQERDRLTPIVEALSMSYLGPDYSQTKEFG---EISIKDLDQLARSSFPLCMRHL 284
+ +E + L ++ + + FG +++ + L++ R PLCM ++
Sbjct: 210 LNVQMPKELEPLKRLINQKMNLFTLRSPCELTSFGCGSKLTAQTLNENLRV-LPLCMYNI 268
Query: 285 FDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWKAEFSQKVGAERFDKE--YAYSIR 342
+++ ++ R Q+G+F L + A F E+FDKE Y R
Sbjct: 269 IFNMKKKRNVMFDSRHQIGIFFYHFQLPQQQL-----ALFLTTYMKEKFDKEPQLYYYFR 323
Query: 343 HNYGKEGKRTDYTPYSCQKIISSTPGVGDHHGCPY---RHFSEENLRAALGRM------- 392
H YG EG + +SC + S G+ HGCP+ +H +E +L+ L
Sbjct: 324 HCYGLEGSKITEPVWSCLNVRSKEVGLNQFHGCPFDLIKH-NERDLKEILVNYLKDWEKV 382
Query: 393 --------------GVGSRAMEDVVDKVRNRHYQLACTLTFEAVHSSSCDAGINHPNQY 437
+ + ++D R+ + AC F+ + S+S + I HPN Y
Sbjct: 383 PPHYDIEDIDKYFPTEQGKTINTILDYSRHLCCEKACETLFQFITSTSVE--ITHPNLY 439
>gi|301767104|ref|XP_002918972.1| PREDICTED: DNA primase large subunit-like, partial [Ailuropoda
melanoleuca]
Length = 153
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 65/110 (59%), Gaps = 10/110 (9%)
Query: 20 TLPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISD---ALARGKRP--EEMENLVRDL--- 71
+L Y P + L +FE A+DR+++LK + + + +G P ++EN +R L
Sbjct: 25 SLQFYLEPPSESISLIEFESLAIDRVKLLKTVENLGVSYVKGTEPYRSKLENEIRKLKFS 84
Query: 72 WKANMRHPEASEDVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRF 121
++ N+ + E KD ISHF+LRL YC++EDLR+WF+ E L R+RF
Sbjct: 85 FRENLE--DEYEPRRKDHISHFILRLAYCQSEDLRRWFIQQEMDLLRFRF 132
>gi|242016773|ref|XP_002428903.1| DNA primase large subunit, putative [Pediculus humanus corporis]
gi|212513685|gb|EEB16165.1| DNA primase large subunit, putative [Pediculus humanus corporis]
Length = 422
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 110/246 (44%), Gaps = 22/246 (8%)
Query: 176 VPFEEVPELVAGRRVYIHKGHAYVAMH---QVVSLVVTQFRSNLSKALILTNRKWTSTIR 232
+PF L++ R+V + G A V + ++V ++ + + + LI + + I
Sbjct: 100 LPFYFPLNLISKRQVELCNGKAIVPCNHWKKIVEMIYSNYLQ-IEMKLIEKCNEIDNVIY 158
Query: 233 EQERDRLTPIV---EALSMSYLGPDYSQTKEFGEISIKDLDQLARSSFPLCMRHLFDKLR 289
E DR+ ++ + L + + + T + ++D ++ FP CM +L LR
Sbjct: 159 NGEDDRIRSLIRRFDVLLNGKINKNLTSTITTKPVKAYEIDSHSQF-FPPCMSNLHQILR 217
Query: 290 EDHHLKHGGRMQLGLFLKGVGLRMEDALAFWKAEFSQKVGAERFD------------KEY 337
H L + R Q LFLK +G+ + + ++FW+ E+ + + Y
Sbjct: 218 RTHRLSYESRYQYTLFLKDIGVPVIENISFWEGEYKKPSKESNCTHTWESSKNRSVYESY 277
Query: 338 AYSIRHNYGKEGKRTDY-TPYSCQKIISSTPGVGDHHGCPYRHFSEENLRAALGRMGVGS 396
Y I H YG GK T +SC K I S D GCP++H ++E L+ L + +
Sbjct: 278 KYQIEHLYGLIGKNNCIKTSHSCSKFIDSVQSKMD-GGCPFQHVTDEKLKKLLPKKILEL 336
Query: 397 RAMEDV 402
+ED+
Sbjct: 337 PDVEDI 342
>gi|384381546|gb|AFH78586.1| DNA primase large subunit, partial [Homo sapiens]
gi|384381548|gb|AFH78587.1| DNA primase large subunit, partial [Homo sapiens]
Length = 62
Score = 72.0 bits (175), Expect = 6e-10, Method: Composition-based stats.
Identities = 33/53 (62%), Positives = 37/53 (69%)
Query: 272 LARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWKAEF 324
L+ SFPL M L LRE+HHL HGGRMQ LFLKG+GL +E L FWK EF
Sbjct: 1 LSTKSFPLYMHQLHKALRENHHLCHGGRMQYVLFLKGIGLTLEQTLQFWKQEF 53
>gi|355713538|gb|AES04706.1| primase, DNA, polypeptide 2 [Mustela putorius furo]
Length = 169
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 75/135 (55%), Gaps = 8/135 (5%)
Query: 20 TLPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISD---ALARGKRP--EEMENLVRDLWKA 74
+L Y P + L +FE A+DR+++LK + + + +G P ++E+ +R L K
Sbjct: 25 SLQFYLEPPSESISLIEFESLAIDRVKLLKAVENLGVSYVKGTEPYQSKLESEIRRL-KF 83
Query: 75 NMRHP--EASEDVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKRAL 132
+ R E KD ISHF+LRL YC++EDLR+WF+ E L R+RF + + +
Sbjct: 84 SFRESLENEYEPRRKDHISHFILRLAYCQSEDLRRWFIQQEMDLLRFRFSILPKDKIQNF 143
Query: 133 MEEFDLPCKAISRTE 147
+++ L +AIS E
Sbjct: 144 LKDSHLHFEAISDDE 158
>gi|312080678|ref|XP_003142703.1| hypothetical protein LOAG_07121 [Loa loa]
Length = 196
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 73/148 (49%), Gaps = 14/148 (9%)
Query: 20 TLPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEEMENLVRDLWKANMRH- 78
L +Y P ++ L +F+ A+ RLRVLK + + + P E E + L K M+
Sbjct: 33 NLQMYLEPPMDDITLLEFQELALSRLRVLKAVEQV--KDRFPRETEAMKNQLTKQLMKLM 90
Query: 79 ---------PEASEDVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSS--E 127
E + +D+ISHF+LRL +C+T + KWF+ E L+++RF + S E
Sbjct: 91 PIACGCCPLEELENERRRDVISHFILRLAFCQTPEQTKWFIQQEMDLFKFRFQIVSKSYE 150
Query: 128 AKRALMEEFDLPCKAISRTEFENAKEKL 155
A ++ + + ++ E N KE L
Sbjct: 151 AVTQFLQANNFDAQLVTDVEKGNLKEDL 178
>gi|149630512|ref|XP_001513890.1| PREDICTED: DNA primase large subunit-like, partial [Ornithorhynchus
anatinus]
Length = 153
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 70/134 (52%), Gaps = 15/134 (11%)
Query: 1 MEIVRSQRSRTNTPNDSVSTL-----PLYRYAPQLEVRLEDFEVFAMDRLRVLK-----G 50
ME + +R R D +L Y P + L +FE A+DRL++LK G
Sbjct: 1 MEFSKPRRPRIRLAGDKRGSLYPHSLQFYLQPPCENISLIEFESLAIDRLKLLKTIENLG 60
Query: 51 ISDALARGKRPEEMENLVRDL---WKANMRHPEASEDVNKDIISHFVLRLVYCRTEDLRK 107
I+ ++EN +R L +++ + + E +D ISHF+LRL YC++EDLR+
Sbjct: 61 INYVKGTDSYRSKLENELRKLKFCYRSMLE--DEYEARRRDHISHFILRLAYCQSEDLRR 118
Query: 108 WFLSMETALYRYRF 121
WF+ E L+R+RF
Sbjct: 119 WFIQQEMDLFRFRF 132
>gi|119624885|gb|EAX04480.1| primase, polypeptide 2A, 58kDa, isoform CRA_a [Homo sapiens]
gi|119624887|gb|EAX04482.1| primase, polypeptide 2A, 58kDa, isoform CRA_a [Homo sapiens]
Length = 185
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 74/133 (55%), Gaps = 6/133 (4%)
Query: 21 LPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISD-ALARGKRPEEMEN-LVRDLWKANMRH 78
L Y P + L +FE A+DR+++LK + + ++ K E+ ++ L +L K +
Sbjct: 26 LQFYLQPPSENISLIEFENLAIDRVKLLKSVENLGVSYVKGTEQYQSKLESELRKLKFSY 85
Query: 79 PEASEDV----NKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKRALME 134
E ED +D ISHF+LRL YC++E+LR+WF+ E L R+RF + + + ++
Sbjct: 86 RENLEDEYEPRRRDHISHFILRLAYCQSEELRRWFIQQEMDLLRFRFSILPKDKIQDFLK 145
Query: 135 EFDLPCKAISRTE 147
+ L +AIS E
Sbjct: 146 DSQLQFEAISDEE 158
>gi|383855145|ref|XP_003703078.1| PREDICTED: probable DNA primase large subunit-like [Megachile
rotundata]
Length = 155
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 73/138 (52%), Gaps = 10/138 (7%)
Query: 310 GLRMEDALAFWKAEFSQ-----KVGAERF---DKEYAYSIRHNYGKEGKRTDYTPYSCQK 361
G+ +E+A+ +WK E+S+ V A + +K++ YSIRH YG EG R +Y SC+
Sbjct: 12 GMHIEEAINYWKEEYSKPHSCTSVCAHDWQSSEKKFIYSIRHLYGLEGSRKNYNSPSCKL 71
Query: 362 IISSTPGVGDHHGCPYRHFSEENLRAALGRMGVGSRAMEDVVDKVRNRHYQLACTLTFEA 421
+ ++ GCP++HF L L + + + + ++ + +++ Q +C F+
Sbjct: 72 MFANISSPMYEGGCPFKHFDRNTLHNLLS-LSLPNNQVNKILATISSQNPQNSCAEVFKI 130
Query: 422 V-HSSSCDAGINHPNQYF 438
+ +++ + I P QY+
Sbjct: 131 LSQTNNSNVTITSPLQYY 148
>gi|397517539|ref|XP_003828967.1| PREDICTED: DNA primase large subunit [Pan paniscus]
gi|17389609|gb|AAH17833.1| PRIM2 protein [Homo sapiens]
gi|119624886|gb|EAX04481.1| primase, polypeptide 2A, 58kDa, isoform CRA_b [Homo sapiens]
gi|119624888|gb|EAX04483.1| primase, polypeptide 2A, 58kDa, isoform CRA_b [Homo sapiens]
Length = 158
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 73/130 (56%), Gaps = 6/130 (4%)
Query: 21 LPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISD-ALARGKRPEEMEN-LVRDLWKANMRH 78
L Y P + L +FE A+DR+++LK + + ++ K E+ ++ L +L K +
Sbjct: 26 LQFYLQPPSENISLIEFENLAIDRVKLLKSVENLGVSYVKGTEQYQSKLESELRKLKFSY 85
Query: 79 PEASEDV----NKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKRALME 134
E ED +D ISHF+LRL YC++E+LR+WF+ E L R+RF + + + ++
Sbjct: 86 RENLEDEYEPRRRDHISHFILRLAYCQSEELRRWFIQQEMDLLRFRFSILPKDKIQDFLK 145
Query: 135 EFDLPCKAIS 144
+ L +A+S
Sbjct: 146 DSQLQFEAVS 155
>gi|383215028|gb|AFG72973.1| primase DNA polypeptide 2, partial [Homo sapiens]
Length = 42
Score = 66.2 bits (160), Expect = 3e-08, Method: Composition-based stats.
Identities = 29/42 (69%), Positives = 36/42 (85%), Gaps = 1/42 (2%)
Query: 333 FDKEYAYSIRHNYGKEGKRTDYTPYSCQKII-SSTPGVGDHH 373
FDK Y+Y+IRH++GKEGKRTDYTP+SC KII S+ P GD+H
Sbjct: 1 FDKGYSYNIRHSFGKEGKRTDYTPFSCLKIILSNPPSQGDYH 42
>gi|328789011|ref|XP_003251216.1| PREDICTED: probable DNA primase large subunit-like [Apis mellifera]
Length = 155
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 78/144 (54%), Gaps = 11/144 (7%)
Query: 304 LFLKGVGLRMEDALAFWKAEFSQKVGA--------ERFDKEYAYSIRHNYGKEGKRTDYT 355
L+ G G+++EDA+ +WK E+S+ + ++++ YSIRH YG EG + +Y
Sbjct: 7 LYYDG-GMQLEDAINYWKEEYSKPHTCSSTCSHNWQMNERKFIYSIRHFYGLEGSKKNYK 65
Query: 356 PYSCQKIISSTPGVGDHHGCPYRHFSEENLRAALGRMGVGSRAMEDVVDKVRNRHYQLAC 415
+C+ + S GCP+++F + N+ L + + + + V++ + +++ Q+AC
Sbjct: 66 SPTCEMMCMSASSSVYEGGCPFKNF-DINILKNLLCLSLSNDHITKVLNAISSQNPQIAC 124
Query: 416 TLTFEAVHS-SSCDAGINHPNQYF 438
F+ ++ + + IN P QY+
Sbjct: 125 AEFFKILNQRNKSNIIINSPLQYY 148
>gi|67472799|ref|XP_652187.1| DNA primase large subunit [Entamoeba histolytica HM-1:IMSS]
gi|56469004|gb|EAL46801.1| DNA primase large subunit, putative [Entamoeba histolytica
HM-1:IMSS]
gi|449705349|gb|EMD45418.1| DNA primase large subunit, putative [Entamoeba histolytica KU27]
Length = 457
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 67/297 (22%), Positives = 121/297 (40%), Gaps = 44/297 (14%)
Query: 170 DAIFYKVPFEEVPELVAGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTS 229
D +FY +PF++V +V RR + G V + ++ F S IL + K +
Sbjct: 158 DKLFYYIPFDKVMPMVTSRRYQMKNGLLRVPRSESDIVLSCLFFS------ILQSDKSLN 211
Query: 230 TIREQERDRLTPIVEALSMSYLGPDYSQTKEFG---EISIKDLDQLARSSFPLCMRHLFD 286
+E + L ++ + FG +++ + L++ R PLC+ ++
Sbjct: 212 VQMPKELEPLKRLINQKMNLFTLRSPCGLASFGCGSKLTAQTLNENLRV-LPLCIYNIIF 270
Query: 287 KLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWKAEFSQKVGAERFDKE--YAYSIRHN 344
+++ ++ R Q+G+F L + A F E+FDKE Y RH
Sbjct: 271 NMKKKRNIMFDSRHQIGIFFYHFQLPQQQL-----ALFLTTYMKEKFDKEPQLYYYFRHC 325
Query: 345 YGKEGKRTDYTPYSCQKIISSTPGVGDHHGCPY---RHFSEENLRAALGRM--------- 392
YG EG + ++C + S G+ HGCP+ +H +E +L+ L
Sbjct: 326 YGLEGSKITEPVWTCLNVRSKEVGLNQFHGCPFDLTKH-NEHDLKEILVNYLKDWEKIPP 384
Query: 393 ------------GVGSRAMEDVVDKVRNRHYQLACTLTFEAVHSSSCDAGINHPNQY 437
+ + ++D R+ + AC F+ + S+S + I HPN Y
Sbjct: 385 HYDIEDIDKYFPTEQGKTINTILDYSRHFCCERACETLFQCITSTSVE--ITHPNLY 439
>gi|167526174|ref|XP_001747421.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163774256|gb|EDQ87888.1| predicted protein [Monosiga brevicollis MX1]
Length = 772
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 50/90 (55%), Gaps = 8/90 (8%)
Query: 301 QLGLFLKGVGLRMEDALAFWKAEFSQKVGAERFD-KEYAYSIRHNYGKEGKRTDYTPYSC 359
++ L + G GL + +++ + +E+ Q +GA K YAYSIRH YG EG R D++P SC
Sbjct: 262 EVSLQVDGAGLCVTESVELFTSEYRQAMGAAAVARKRYAYSIRHLYGLEGSRIDHSPQSC 321
Query: 360 QKIISSTPGVGDHHGCPYRHFSEENLRAAL 389
++ GCP+R + L+ AL
Sbjct: 322 SDVLQG-------EGCPFRSADAQQLKQAL 344
>gi|440299459|gb|ELP92014.1| hypothetical protein EIN_388080 [Entamoeba invadens IP1]
Length = 431
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 83/184 (45%), Gaps = 23/184 (12%)
Query: 265 SIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWKAEF 324
+I D+ Q + P C+ + K +K+ R Q+ +F K G+ + +A+ + +A
Sbjct: 251 TINDVLQ----NLPPCIYLIHAKASHGEQMKYDARRQIVVFFKNAGVELNEAMEYMRARL 306
Query: 325 SQKVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQKIISSTPGVGDHHGCPY------R 378
G E+ K+ Y + H YG G D+ P C+ ++S + +G HGC
Sbjct: 307 DVMRGKEK--KQLEYFVEHCYGMRGNHIDFKPDLCKNLMSQSMCIGGLHGCILCKRQYNN 364
Query: 379 HFSEENLRAALGRMGVGSRAMEDVVDKVRNRHYQL-ACTLTFEAVHSSSCDAG----INH 433
F +++L + L +GV ++ DK Q+ C+ + ++ SS G IN
Sbjct: 365 EFRKKSLESYLEYIGV------EMSDKEMVELLQMEECSACAQLLNMSSRGVGDIEEINS 418
Query: 434 PNQY 437
PN +
Sbjct: 419 PNLF 422
>gi|328863549|gb|EGG12648.1| hypothetical protein MELLADRAFT_51280 [Melampsora larici-populina
98AG31]
Length = 112
Score = 61.2 bits (147), Expect = 1e-06, Method: Composition-based stats.
Identities = 32/107 (29%), Positives = 50/107 (46%), Gaps = 12/107 (11%)
Query: 359 CQKIISSTPGVGDHHGCPYRHFSEENLRAALGR---MGVGSRAMEDVVDKVRNRHYQLAC 415
C II + G D HGCP++ F+ NL L + + S ++D+++ ++ Y L+C
Sbjct: 3 CTTIIKNGAGPSDSHGCPFKQFTPMNLTQFLTQSYGLNSNSNEIKDILNWNKSSLYHLSC 62
Query: 416 TLTFEAVHSS---------SCDAGINHPNQYFSDSHKILQPKNNNAA 453
T FE H ++HPN+YF SHK+ P A
Sbjct: 63 TCVFEVHHKKYGVKKGQGVGQTESVSHPNRYFEASHKLSHPIEEGTA 109
>gi|126465337|ref|YP_001040446.1| DNA primase, large subunit [Staphylothermus marinus F1]
gi|126014160|gb|ABN69538.1| DNA primase, large subunit [Staphylothermus marinus F1]
Length = 376
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 51/103 (49%), Gaps = 12/103 (11%)
Query: 276 SFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWK--AEFSQKVGAERF 333
+FP CM+ L ++LR +L H R + FL +G+ ++ L F+K +F++K+
Sbjct: 251 AFPPCMKILLNRLRSGENLGHHERFTIAAFLARIGMDIDSMLEFFKNAPDFNEKIA---- 306
Query: 334 DKEYAYSIRHNYGKEGKRTDYTPYSCQ--KIISSTPGVGDHHG 374
Y + H G G R Y PYSC+ K ++ P G G
Sbjct: 307 ----RYQLEHIAGLRGSRKKYLPYSCESMKTLNLCPINGQCRG 345
>gi|350406227|ref|XP_003487699.1| PREDICTED: DNA primase large subunit-like [Bombus impatiens]
Length = 155
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 49/91 (53%), Gaps = 9/91 (9%)
Query: 304 LFLKGVGLRMEDALAFWKAEFSQKVGA--------ERFDKEYAYSIRHNYGKEGKRTDYT 355
L+ G G+++EDA+ +WK E+S+ + ++++ YSIRH YG EG R +Y
Sbjct: 7 LYCDG-GMKLEDAINYWKEEYSKPHSCSSNCLHNWKSNERKFIYSIRHLYGLEGSRKNYK 65
Query: 356 PYSCQKIISSTPGVGDHHGCPYRHFSEENLR 386
+C+ I +T GCP++ F L+
Sbjct: 66 SPTCELICMNTSNPMYEGGCPFKSFDVNTLK 96
>gi|116754335|ref|YP_843453.1| DNA primase large subunit [Methanosaeta thermophila PT]
gi|116665786|gb|ABK14813.1| DNA primase large subunit [Methanosaeta thermophila PT]
Length = 330
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 78/183 (42%), Gaps = 29/183 (15%)
Query: 192 IHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEALSMSYL 251
I G+ V +++ L+ + R + + L L +I E D L I + L+ S
Sbjct: 152 IDHGYLKVTREELLRLMQERIRDRIQEGLPLD----AGSICEGLSDHLRSIRDELASS-- 205
Query: 252 GPDYSQTKEFGEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGL 311
S+ DL + +R + P CMR L ++L +L H R L FL + L
Sbjct: 206 ----------KRSSMVDLGEFSRDALPPCMRSLLEQLAAGRNLAHTARFALTSFLLNINL 255
Query: 312 RMEDALAFWKAEFSQKVGAERFDKEYA-YSIRHNYGKEGKRTDYTPYSCQKIIS--STPG 368
+ED + + FD+E Y I H G G R YTP SC +++ + PG
Sbjct: 256 GVEDIIGIFN-------NTPDFDEEMTRYQIEHIAGSTGTR--YTPPSCSTMLTYGNCPG 306
Query: 369 VGD 371
GD
Sbjct: 307 -GD 308
>gi|297526386|ref|YP_003668410.1| DNA primase, large subunit [Staphylothermus hellenicus DSM 12710]
gi|297255302|gb|ADI31511.1| DNA primase, large subunit [Staphylothermus hellenicus DSM 12710]
Length = 376
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 51/103 (49%), Gaps = 12/103 (11%)
Query: 276 SFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWK--AEFSQKVGAERF 333
+FP CM+ L ++LR +L H R + FL +G+ ++ L F+K ++++K+
Sbjct: 251 AFPPCMKLLLNRLRSGENLGHHERFTIAAFLARIGMDVDSMLEFFKNAPDYNEKIA---- 306
Query: 334 DKEYAYSIRHNYGKEGKRTDYTPYSCQ--KIISSTPGVGDHHG 374
Y + H G G R Y PYSC+ K ++ P G G
Sbjct: 307 ----RYQLEHIAGLRGSRKKYLPYSCESMKALNLCPISGQCKG 345
>gi|167376577|ref|XP_001734052.1| hypothetical protein [Entamoeba dispar SAW760]
gi|165904588|gb|EDR29793.1| hypothetical protein, conserved [Entamoeba dispar SAW760]
Length = 440
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 62/332 (18%), Positives = 134/332 (40%), Gaps = 59/332 (17%)
Query: 55 LARGKRPEEMENLVRDLWKANMRH------PEAS-EDVNKDIISHFVLRLVYCRTEDLRK 107
L + + P E E+L+R + H P + +++ D +S++ L + +D+
Sbjct: 60 LKKYQLPMENEDLMRVQVYKELIHLISENLPLTTIKEIQLDYLSYYYFYLTFHSRKDI-- 117
Query: 108 WFLSMETALYRYRFLLGSSEAKRALMEEFDLPCKAISRTEFENAKEKLEQVARSFDQPLP 167
F ++E+ ++ +R L S +L++ CK+I +T +P
Sbjct: 118 -FDNIESIIFLHRLYLTSPFNHFSLLQ-----CKSIIQTS-----------------SIP 154
Query: 168 TADAIFYKVPFEEVPELVAGRRVYIHKGHAYVAMHQVV--SLVVTQFRSNLSKALILTNR 225
+ VPF+++ +L+ + + G+ + ++++ + F L
Sbjct: 155 LVE-----VPFQKISQLLPLYKYRLKNGYLLIPSNELIYGCFIYCIFNP-------LKQP 202
Query: 226 KWTS--TIREQERDRLTPIVEALSMSYLGPDYSQTKEFGEISIKDLDQLARSSFPLCMRH 283
K+ +R++ L P++ L + + +E + S P CM H
Sbjct: 203 KFIDLLILRDEPPFLLQPLLSVLPKTKQQTILNNNRELS---------VVLSKLPACMYH 253
Query: 284 LFDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRH 343
+ + +K+ R Q+ +FLK G+ + + + G E+ K+ Y ++H
Sbjct: 254 IHSLSSGKYQMKYDTRRQIVIFLKNAGVDANVCMEYMRQRVDLMRGKEK--KQLEYFVQH 311
Query: 344 NYGKEGKRTDYTPYSCQKIISSTPGVGDHHGC 375
YG +G +++P C+ I G+ GC
Sbjct: 312 CYGLKGSHINFSPEKCKSIQQMNIKPGEACGC 343
>gi|435850670|ref|YP_007312256.1| DNA primase, large subunit [Methanomethylovorans hollandica DSM
15978]
gi|433661300|gb|AGB48726.1| DNA primase, large subunit [Methanomethylovorans hollandica DSM
15978]
Length = 352
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 81/332 (24%), Positives = 140/332 (42%), Gaps = 59/332 (17%)
Query: 40 FAMDRLRVLKGISDALARGKRPEEMENLVRDLWKANMRHPEA-SEDVNKDIIS----HFV 94
F+++RL V + + A +RG +E +++ L + +R P+ D +K +I F
Sbjct: 24 FSLERLLVSRAMDSARSRG-----VERVIQAL-QGEIRKPQLLGSDESKILIELLSYPFA 77
Query: 95 LRLVYCRTED--LRKWFLSMETALYRYRFLLGSSEAKRALMEEFDLPCKAISRTEFENAK 152
LV C ++ +R++ L+ + Y L SSE ++ +F + IS EF+
Sbjct: 78 RILVSCIDDNFLIRRYALAEAVSCYDL-LRLESSEFICSIASDFQVDI-VISNHEFDIHF 135
Query: 153 EKLEQVARSFDQPLPTADAIFYKVPFEEVPELVAGRRVYIHKGHAYVAMHQVVSLVVTQF 212
++A S A+ +K+ R+ + KGH Y++ ++ L+
Sbjct: 136 TDYIRLASSMK-------ALEWKL---------VNRK--LRKGHVYISKEELARLLQEAI 177
Query: 213 RSNLSKALILTNRKWTSTIREQERDRLTPIVEALSMSYLGPDYSQTKE-FGEISIKDLDQ 271
R + +L L I E TP ++ + + Q KE FG D
Sbjct: 178 RGRIQGSLPLD-------IPEDICRMSTPYIDPIQT-----ELQQMKETFGS---GDFGA 222
Query: 272 LARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWKAEFSQKVGAE 331
+ + FP CM H +R +L H R L FL+ VG+ ++D +A + +
Sbjct: 223 VESNMFPPCMVHAISNVRAGVNLAHSMRFALTSFLRNVGMSVDDIIAMFNV-------SP 275
Query: 332 RFDKEYA-YSIRHNYGKEGKRTDYTPYSCQKI 362
FD + Y I H G G T+Y P SC +
Sbjct: 276 DFDMDKTRYQIEHISGSSG--TEYKPPSCSTM 305
>gi|444724979|gb|ELW65563.1| DNA primase large subunit [Tupaia chinensis]
Length = 164
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/39 (56%), Positives = 29/39 (74%)
Query: 83 EDVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRF 121
E +D ISHF+LRL YC++EDLR+WF+ E L R+RF
Sbjct: 79 EPRRRDHISHFILRLAYCQSEDLRRWFIQQEMDLLRFRF 117
>gi|448406962|ref|ZP_21573394.1| DNA primase large subunit [Halosimplex carlsbadense 2-9-1]
gi|445676768|gb|ELZ29285.1| DNA primase large subunit [Halosimplex carlsbadense 2-9-1]
Length = 399
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 52/109 (47%), Gaps = 7/109 (6%)
Query: 267 KDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWKAEFSQ 326
+D+D + FP CM+HL D++++ HL+H R + FL +G+ ++ + + E +
Sbjct: 238 RDIDTVVPELFPPCMKHLLDQVQQGDHLEHHSRFAIASFLTSIGMTTDEIVDIF--EVNP 295
Query: 327 KVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQKIISSTPGVGDHHGC 375
G E Y + H G TDY+P +C + S +G C
Sbjct: 296 GFGEEA----TRYQVDHIRGATSP-TDYSPPACATMQSYGDCIGKDEIC 339
>gi|397464710|ref|XP_003804212.1| PREDICTED: DNA primase large subunit-like, partial [Pan paniscus]
Length = 87
Score = 53.5 bits (127), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 36/50 (72%)
Query: 174 YKVPFEEVPELVAGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILT 223
YK+PF + +L GR+VY+ G AYV + +V++++ +FR+ LSKAL ++
Sbjct: 31 YKIPFADALDLFRGRKVYLEDGFAYVPLKDIVAIILNEFRAKLSKALAVS 80
>gi|11497948|ref|NP_069172.1| DNA primase large subunit [Archaeoglobus fulgidus DSM 4304]
gi|34395748|sp|O29911.1|PRIL_ARCFU RecName: Full=Probable DNA primase large subunit
gi|2650298|gb|AAB90898.1| conserved hypothetical protein [Archaeoglobus fulgidus DSM 4304]
Length = 370
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 64/133 (48%), Gaps = 9/133 (6%)
Query: 240 TPIVEALSMSYLGPDYSQTKEFGEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGR 299
P+ EA+S + +E + ++ DL ++ + P CMR + +L+ ++ H R
Sbjct: 229 VPVSEAVSEAVRELSRKAKRESEKFAM-DLGEVDLNCLPPCMREILSELQRGMNIPHTAR 287
Query: 300 MQLGLFLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYA-YSIRHNYGKEGKRTDYTPYS 358
+ FL +G+ +++ +A +K+ A FD E Y + H G+ GK +YT S
Sbjct: 288 FAITSFLLNIGMTVDEIIALFKS-------APDFDDEKTRYQVEHIAGERGKGAEYTSPS 340
Query: 359 CQKIISSTPGVGD 371
C + + + V D
Sbjct: 341 CDTMRTYSNCVAD 353
>gi|393795547|ref|ZP_10378911.1| DNA primase large subunit [Candidatus Nitrosoarchaeum limnia BG20]
Length = 341
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 85/199 (42%), Gaps = 33/199 (16%)
Query: 166 LPTADAIFYKVPFEEVPELVAGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNR 225
+P +D + + + F E + R ++ G ++ H+ V L+ + + +S +I N
Sbjct: 148 IPVSDYLRHSINFHEREWKLINR--HVENGFVFLTPHETVRLIRKELGTYISSKII--NA 203
Query: 226 KWTSTIREQERDRLTPIVEALSMSYLGPDYSQTKEFGEISIKDLDQLARSSFPLCMRHLF 285
K I E P+ + +SMS Y+ T GE +P C++H
Sbjct: 204 KTPPMITGFEE----PVNKLISMSKKFTTYTVTT--GE-------------YPPCIKHAI 244
Query: 286 DKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWK--AEFSQKVGAERFDKEYAYSIRH 343
D L + +L H GR L FL G +E+ +K +++++V Y + H
Sbjct: 245 DVLEKGENLPHSGRFMLATFLLSKGQTVEEIAPLFKNAPDYNERVT--------LYQLNH 296
Query: 344 NYGKEGKRTDYTPYSCQKI 362
G G T Y+ SC+K+
Sbjct: 297 LAGTSGSGTHYSCPSCEKL 315
>gi|167043356|gb|ABZ08059.1| putative eukaryotic-type DNA primase, large subunit [uncultured
marine crenarchaeote HF4000_ANIW141O9]
Length = 345
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/199 (20%), Positives = 84/199 (42%), Gaps = 33/199 (16%)
Query: 166 LPTADAIFYKVPFEEVPELVAGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNR 225
+P +D + + V F E+ + R ++ G +++ H+ L+ + +S + N
Sbjct: 152 IPISDYLQHAVNFHELEWKLVNR--HVENGMVFLSTHESARLIRKELGGYISSRIRAANT 209
Query: 226 KWTSTIREQERDRLTPIVEALSMSYLGPDYSQTKEFGEISIKDLDQLARSSFPLCMRHLF 285
S E + ++L+ + + ++ + + +P C++H
Sbjct: 210 PSMSKGFEDKVNKLSELAKKFV---------------------VNTIVSTEYPPCIKHAI 248
Query: 286 DKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWK--AEFSQKVGAERFDKEYAYSIRH 343
++L +L H GR L FL G G +E+ + +K ++++KV Y I+
Sbjct: 249 EELNSGENLPHFGRFMLATFLLGRGQTIEEIVPLFKNAPDWNEKVT--------RYQIKQ 300
Query: 344 NYGKEGKRTDYTPYSCQKI 362
G+ G T Y+ SC KI
Sbjct: 301 ISGETGSNTKYSCPSCDKI 319
>gi|432331201|ref|YP_007249344.1| DNA primase, large subunit [Methanoregula formicicum SMSP]
gi|432137910|gb|AGB02837.1| DNA primase, large subunit [Methanoregula formicicum SMSP]
Length = 364
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 69/161 (42%), Gaps = 22/161 (13%)
Query: 230 TIREQER-----DRLTPI--------VEALSMSYLGPDYSQTKE-FGEISIKDLDQLARS 275
TIRE+ER +R+ + V A + P +Q K+ + E ++ + S
Sbjct: 173 TIREEERYELVRERVRSLLRRDLPHKVPASLCEQISPKVAQIKKAYQEQMLEQFGAVEES 232
Query: 276 SFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWKAEFSQKVGAERFDK 335
+FP CM+ L L +L H GR L FL +GL + A + + FD
Sbjct: 233 AFPPCMQALIKALTGGVNLTHAGRFSLTSFLHTIGLDVNGIAAMY-------ARSPDFDP 285
Query: 336 EYA-YSIRHNYGKEGKRTDYTPYSCQKIISSTPGVGDHHGC 375
E Y + H G+ G T+YT +C + ++ V H C
Sbjct: 286 EKTMYQVEHITGRGGSGTEYTAPACAAMRTTGLCVHQDHLC 326
>gi|183232051|ref|XP_651150.2| hypothetical protein [Entamoeba histolytica HM-1:IMSS]
gi|169802214|gb|EAL45763.2| hypothetical protein EHI_008590 [Entamoeba histolytica HM-1:IMSS]
Length = 440
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 55/297 (18%), Positives = 118/297 (39%), Gaps = 52/297 (17%)
Query: 83 EDVNKDIISHFVLRLVYCRTEDLRKWFLSMETALYRYRFLLGSSEAKRALMEEFDLPCKA 142
+++ D +S++ L + +D+ F ++E+ ++ +R L S +L++ CK
Sbjct: 95 KEIQLDHLSYYYFYLTFHSRKDI---FDNIESIIFLHRLYLTSPFNHFSLLQ-----CKN 146
Query: 143 ISRTEFENAKEKLEQVARSFDQPLPTADAIFYKVPFEEVPELVAGRRVYIHKGHAYVAMH 202
I +T +P + VPF+++ +L+ + + G+ + +
Sbjct: 147 IIQTS-----------------SIPLVE-----VPFQKISQLLPLYKYRLKNGYLLIPSN 184
Query: 203 QVV--SLVVTQFRSNLSKALILTNRKWTSTI--REQERDRLTPIVEALSMSYLGPDYSQT 258
+++ + F L K+ + R + L P++ L + T
Sbjct: 185 ELIYGCFIYCIFNP-------LKQPKFIDLLLLRNEPPFLLQPLLSVLPKTKQQTILDNT 237
Query: 259 KEFGEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALA 318
+E + S P CM H+ + +K+ R Q+ +FLK G+ +
Sbjct: 238 RELS---------VVLSKLPACMYHIHSLSSGKYQMKYDTRRQIVIFLKNAGVDANVCME 288
Query: 319 FWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQKIISSTPGVGDHHGC 375
+ + G E+ K+ Y ++H YG +G +++P C+ I G+ GC
Sbjct: 289 YMRQRVDLMRGKEK--KQLEYFVQHCYGLKGSHINFSPEKCKSIQQMNIKPGEVCGC 343
>gi|433589486|ref|YP_007278982.1| DNA primase, large subunit [Natrinema pellirubrum DSM 15624]
gi|448335628|ref|ZP_21524768.1| DNA primase large subunit [Natrinema pellirubrum DSM 15624]
gi|433304266|gb|AGB30078.1| DNA primase, large subunit [Natrinema pellirubrum DSM 15624]
gi|445616467|gb|ELY70092.1| DNA primase large subunit [Natrinema pellirubrum DSM 15624]
Length = 363
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/174 (21%), Positives = 72/174 (41%), Gaps = 26/174 (14%)
Query: 192 IHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEALSMSYL 251
+ G V ++++LV R + L + +T E E D + ++ + ++
Sbjct: 164 LEAGEVPVDEDELLTLVREAIRGRIDDGLPFEVPESIATALEDEADEIREVLAEMDLT-- 221
Query: 252 GPDYSQTKEFGEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGL 311
+D+D + FP CM+ L D++++ HL H R + FL +G+
Sbjct: 222 ---------------QDIDTVVPDLFPPCMKALLDQIQKGEHLPHHSRFAITAFLTSIGM 266
Query: 312 RMEDALAFWKAEFSQKVGAERFDKEYA-YSIRHNYGKEGKRTDYTPYSCQKIIS 364
++ + ++ S F +E Y H G + T+Y+P SC + S
Sbjct: 267 NTDEIVDLYRVNSS-------FGEEMTRYQTDHIRG-DTSPTEYSPPSCATMQS 312
>gi|355572362|ref|ZP_09043506.1| DNA primase, large subunit [Methanolinea tarda NOBI-1]
gi|354824736|gb|EHF08978.1| DNA primase, large subunit [Methanolinea tarda NOBI-1]
Length = 367
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 49/105 (46%), Gaps = 8/105 (7%)
Query: 259 KEFGEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALA 318
+EF + ++D + S+FP CM+ + L ++ H GR L FL +G+ + +
Sbjct: 211 EEFQKKILRDFGDVEESAFPPCMQAILSALSGGTNITHAGRFALTAFLHNIGMDTAEIIQ 270
Query: 319 FWKAEFSQKVGAERFD-KEYAYSIRHNYGKEGKRTDYTPYSCQKI 362
+ A FD + Y + H G+ GK T+YT SC +
Sbjct: 271 VY-------CRAPDFDISKTQYQVEHISGRGGKGTEYTAPSCSAM 308
>gi|448363935|ref|ZP_21552529.1| DNA primase large subunit [Natrialba asiatica DSM 12278]
gi|445644823|gb|ELY97830.1| DNA primase large subunit [Natrialba asiatica DSM 12278]
Length = 397
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 48/99 (48%), Gaps = 9/99 (9%)
Query: 267 KDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWKAEFSQ 326
+D+D + FP CM+ L D++++ HL H R + FL +G+ ++ + ++ S
Sbjct: 243 RDIDTVVPELFPPCMQALLDQIQKGEHLPHHSRFAITAFLSSIGMTTDEIVELYRVNSS- 301
Query: 327 KVGAERFDKEYA-YSIRHNYGKEGKRTDYTPYSCQKIIS 364
F +E Y H G E T+Y+P SC + S
Sbjct: 302 ------FGEEMTRYQTDHIRG-ETSPTEYSPPSCATMQS 333
>gi|448381493|ref|ZP_21561613.1| DNA primase large subunit [Haloterrigena thermotolerans DSM 11522]
gi|445662980|gb|ELZ15740.1| DNA primase large subunit [Haloterrigena thermotolerans DSM 11522]
Length = 363
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/174 (21%), Positives = 72/174 (41%), Gaps = 26/174 (14%)
Query: 192 IHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEALSMSYL 251
+ G V ++++LV R + L + +T E E D + ++ + ++
Sbjct: 164 LAAGEVPVDEDELLTLVREAIRGRIDDGLPFEVPESIATALEDEADEIREVLAEMDLT-- 221
Query: 252 GPDYSQTKEFGEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGL 311
+D+D + FP CM+ L D++++ HL H R + FL +G+
Sbjct: 222 ---------------QDIDTVVPDLFPPCMKALLDQIQKGEHLPHHSRFAITAFLTSIGM 266
Query: 312 RMEDALAFWKAEFSQKVGAERFDKEYA-YSIRHNYGKEGKRTDYTPYSCQKIIS 364
++ + ++ S F +E Y H G + T+Y+P SC + S
Sbjct: 267 DTDEIVDLYRVNSS-------FGEEMTRYQTDHIRG-DTSPTEYSPPSCATMQS 312
>gi|448366664|ref|ZP_21554787.1| DNA primase large subunit [Natrialba aegyptia DSM 13077]
gi|445654119|gb|ELZ06975.1| DNA primase large subunit [Natrialba aegyptia DSM 13077]
Length = 397
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 48/99 (48%), Gaps = 9/99 (9%)
Query: 267 KDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWKAEFSQ 326
+D+D + FP CM+ L D++++ HL H R + FL +G+ ++ + ++ S
Sbjct: 243 RDIDTVVPELFPPCMQALLDQIQKGEHLPHHSRFAITAFLSSIGMTTDEIVDLYRVNSS- 301
Query: 327 KVGAERFDKEYA-YSIRHNYGKEGKRTDYTPYSCQKIIS 364
F +E Y H G E T+Y+P SC + S
Sbjct: 302 ------FGEEMTRYQTDHIRG-ETSPTEYSPPSCATMQS 333
>gi|448320892|ref|ZP_21510377.1| DNA primase large subunit [Natronococcus amylolyticus DSM 10524]
gi|445605319|gb|ELY59249.1| DNA primase large subunit [Natronococcus amylolyticus DSM 10524]
Length = 358
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 70/143 (48%), Gaps = 15/143 (10%)
Query: 229 STIREQERDRLTP-----IVEALSMSYLGPDYSQTKE-FGEISI-KDLDQLARSSFPLCM 281
+ +RE R+R+ + +A++ S L P+ ++ ++ E+ + +++D + FP CM
Sbjct: 177 TLLREAIRERIEEGLPFQVPDAIAAS-LEPEAAEIRDVLAELDLTREIDTVVPDLFPPCM 235
Query: 282 RHLFDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSI 341
+ L D +++ HL H R + FL +G+ ++ + ++ S F +E
Sbjct: 236 KALLDDIQKGEHLPHHSRFAITAFLTSIGMSTDEIVELYRVNSS-------FGEEMTRYQ 288
Query: 342 RHNYGKEGKRTDYTPYSCQKIIS 364
+ G E T+Y+P SC + S
Sbjct: 289 TDHIGGETSPTEYSPPSCATMQS 311
>gi|448730686|ref|ZP_21712991.1| DNA primase large subunit [Halococcus saccharolyticus DSM 5350]
gi|445793127|gb|EMA43717.1| DNA primase large subunit [Halococcus saccharolyticus DSM 5350]
Length = 373
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 56/112 (50%), Gaps = 11/112 (9%)
Query: 256 SQTKE-FGEISI-KDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRM 313
SQ +E E+ + +++D + FP CMR L D +R+ HL+H R + FL +G+
Sbjct: 227 SQVRETLSELELTREIDTVVPDLFPPCMRALLDSVRKGEHLEHHSRFAITAFLTSIGMTT 286
Query: 314 EDALAFWKAEFSQKVGAERFDKEYA-YSIRHNYGKEGKRTDYTPYSCQKIIS 364
++ + F +S G F +E Y H G E T+Y+P SC + S
Sbjct: 287 DEIVEF----YSVNPG---FGEEMTRYQTDHIRG-ETSPTEYSPPSCATMQS 330
>gi|389861020|ref|YP_006363260.1| DNA primase, large subunit [Thermogladius cellulolyticus 1633]
gi|388525924|gb|AFK51122.1| DNA primase, large subunit [Thermogladius cellulolyticus 1633]
Length = 399
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 44/89 (49%), Gaps = 10/89 (11%)
Query: 276 SFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAF--WKAEFSQKVGAERF 333
+FP C++ ++LR+ ++ H R + FL +GL ++ + + +F++K+
Sbjct: 246 AFPPCVKRAIERLRQGENVSHAERFLIATFLLNIGLEVDQVVELFSYAPDFNEKI----- 300
Query: 334 DKEYAYSIRHNYGKEGKRTDYTPYSCQKI 362
Y + H G G R Y PYSC K+
Sbjct: 301 ---TRYQVEHLAGLRGGRKKYMPYSCDKL 326
>gi|329766756|ref|ZP_08258299.1| DNA primase, large subunit [Candidatus Nitrosoarchaeum limnia SFB1]
gi|329137011|gb|EGG41304.1| DNA primase, large subunit [Candidatus Nitrosoarchaeum limnia SFB1]
Length = 341
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/199 (21%), Positives = 84/199 (42%), Gaps = 33/199 (16%)
Query: 166 LPTADAIFYKVPFEEVPELVAGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNR 225
+P +D + + + F E + R ++ G +++ H+ V L+ + + +S +I
Sbjct: 148 IPVSDYLKHSINFHEREWKLINR--HVENGLVFLSPHETVRLIRKELGTYISSKII---- 201
Query: 226 KWTSTIREQERDRLTPIVEALSMSYLGPDYSQTKEFGEISIKDLDQLARSSFPLCMRHLF 285
+ P++ S +G S +K+F ++ +P C++H
Sbjct: 202 ----------NAKTPPMIVGFEES-VGKLISMSKKFATYTV------TTGEYPPCIKHAI 244
Query: 286 DKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWK--AEFSQKVGAERFDKEYAYSIRH 343
+ L + +L H GR L FL G +E+ +K +++Q+V Y + H
Sbjct: 245 EVLEKGENLPHSGRFMLATFLLSKGQTVEEIAPLFKNAPDYNQRVT--------LYQLNH 296
Query: 344 NYGKEGKRTDYTPYSCQKI 362
G G T Y+ SC+K+
Sbjct: 297 LAGTSGSGTHYSCPSCEKL 315
>gi|435849154|ref|YP_007311404.1| DNA primase, large subunit [Natronococcus occultus SP4]
gi|433675422|gb|AGB39614.1| DNA primase, large subunit [Natronococcus occultus SP4]
Length = 358
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 46/98 (46%), Gaps = 7/98 (7%)
Query: 267 KDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWKAEFSQ 326
+++D + FP CM+ L D +++ HL H R + FL +G+ ++ + ++ S
Sbjct: 221 REIDTVVPDLFPPCMKALLDDIQKGEHLPHHSRFAITAFLTSIGMSTDEIVELYRVNSS- 279
Query: 327 KVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQKIIS 364
F +E + G E T+Y+P SC + S
Sbjct: 280 ------FGEEMTRYQTDHIGGETSPTEYSPPSCATMQS 311
>gi|218884209|ref|YP_002428591.1| DNA primase, large subunit [Desulfurococcus kamchatkensis 1221n]
gi|218765825|gb|ACL11224.1| DNA primase, large subunit [Desulfurococcus kamchatkensis 1221n]
Length = 381
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 49/107 (45%), Gaps = 10/107 (9%)
Query: 262 GEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWK 321
G + ++ L + P C+ + + + H R L FL +GL ++ L +++
Sbjct: 253 GTMETSEVGGLITEALPPCISRIISIVESGGNPSHEERFNLAAFLANIGLDVDSILEYFR 312
Query: 322 --AEFSQKVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQKIISST 366
+F++K+ Y + H G +G R Y PYSC+K+ S+
Sbjct: 313 KTPDFNEKIAR--------YQVEHISGMKGSRKKYMPYSCEKMKSTN 351
>gi|448315680|ref|ZP_21505321.1| DNA primase large subunit [Natronococcus jeotgali DSM 18795]
gi|445611052|gb|ELY64815.1| DNA primase large subunit [Natronococcus jeotgali DSM 18795]
Length = 358
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 46/98 (46%), Gaps = 7/98 (7%)
Query: 267 KDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWKAEFSQ 326
+++D + FP CM+ L D +++ HL H R + FL +G+ ++ + ++ S
Sbjct: 221 REIDTVVPDLFPPCMKALLDDIQKGEHLPHHSRFAITAFLTSIGMSTDEIVELYRVNSS- 279
Query: 327 KVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQKIIS 364
F +E + G E T+Y+P SC + S
Sbjct: 280 ------FGEEMTRYQTDHIGGETSPTEYSPPSCATMQS 311
>gi|448356554|ref|ZP_21545287.1| DNA primase large subunit [Natrialba chahannaoensis JCM 10990]
gi|445653587|gb|ELZ06458.1| DNA primase large subunit [Natrialba chahannaoensis JCM 10990]
Length = 427
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 50/110 (45%), Gaps = 9/110 (8%)
Query: 267 KDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWKAEFSQ 326
+++D + FP CM+ L D++++ HL H R + FL +G+ ++ + ++ S
Sbjct: 263 REIDTVVPELFPPCMKALLDQIQKGEHLPHHSRFAITAFLSSIGMTTDEIVDLYRVNSS- 321
Query: 327 KVGAERFDKEYA-YSIRHNYGKEGKRTDYTPYSCQKIISSTPGVGDHHGC 375
F +E Y H G E T+Y+P SC + S V C
Sbjct: 322 ------FGEEMTRYQTDHIRG-ETSPTEYSPPSCATMQSYGDCVNKDDLC 364
>gi|281353440|gb|EFB29024.1| hypothetical protein PANDA_021431 [Ailuropoda melanoleuca]
Length = 49
Score = 50.1 bits (118), Expect = 0.003, Method: Composition-based stats.
Identities = 20/49 (40%), Positives = 35/49 (71%)
Query: 175 KVPFEEVPELVAGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILT 223
++PF + +L GR+VY+ G AYV + +V++V+ +FR+ LSKAL ++
Sbjct: 1 QIPFADALDLFRGRKVYLEGGFAYVPLRDIVAIVLNEFRAKLSKALAVS 49
>gi|305662475|ref|YP_003858763.1| DNA primase, large subunit [Ignisphaera aggregans DSM 17230]
gi|304377044|gb|ADM26883.1| DNA primase, large subunit [Ignisphaera aggregans DSM 17230]
Length = 398
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 69/156 (44%), Gaps = 17/156 (10%)
Query: 208 VVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEALSMSYLG-PDYSQTKEFGEI-S 265
++ F + + ++L K ++IRE + L V + +G P + G I S
Sbjct: 224 IINIFSNTILSEILL---KIVNSIRETNKVSLD--VSRIDGKDIGVPRTDLSSVLGNIKS 278
Query: 266 IKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWK--AE 323
+ +L +++ FP C+ L + L +L H R L FL +GL +E L ++ +
Sbjct: 279 VDELVNVSKEIFPPCINSLLESLLRGENLSHHQRFALATFLINIGLDIEVILQLFRYSPD 338
Query: 324 FSQKVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSC 359
F++K+ Y I H G G + Y Y+C
Sbjct: 339 FNEKIA--------RYQIEHLAGLRGSKRKYLTYNC 366
>gi|289581704|ref|YP_003480170.1| DNA primase, large subunit [Natrialba magadii ATCC 43099]
gi|448282889|ref|ZP_21474171.1| DNA primase large subunit [Natrialba magadii ATCC 43099]
gi|289531257|gb|ADD05608.1| DNA primase, large subunit [Natrialba magadii ATCC 43099]
gi|445575504|gb|ELY29979.1| DNA primase large subunit [Natrialba magadii ATCC 43099]
Length = 427
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 50/110 (45%), Gaps = 9/110 (8%)
Query: 267 KDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWKAEFSQ 326
+++D + FP CM+ L D++++ HL H R + FL +G+ ++ + ++ S
Sbjct: 262 REIDTVVPELFPPCMKSLLDQVQKGEHLPHHSRFAITAFLSSIGMTTDEIVDLYRVNSS- 320
Query: 327 KVGAERFDKEYA-YSIRHNYGKEGKRTDYTPYSCQKIISSTPGVGDHHGC 375
F +E Y H G E T+Y+P SC + S V C
Sbjct: 321 ------FGEEMTRYQTDHIRG-ETSPTEYSPPSCATMQSYGDCVNKDDLC 363
>gi|383620164|ref|ZP_09946570.1| DNA primase large subunit [Halobiforma lacisalsi AJ5]
gi|448696142|ref|ZP_21697703.1| DNA primase large subunit [Halobiforma lacisalsi AJ5]
gi|445783830|gb|EMA34654.1| DNA primase large subunit [Halobiforma lacisalsi AJ5]
Length = 370
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/185 (21%), Positives = 75/185 (40%), Gaps = 26/185 (14%)
Query: 192 IHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEALSMSYL 251
+ G ++ ++++LV R+ + + L +T E E D + ++ L ++
Sbjct: 167 LADGEVPLSEEELLTLVREAIRNRIDEGLPFDVPDAIATELEAEADEIRRVLADLDLT-- 224
Query: 252 GPDYSQTKEFGEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGL 311
+++D + FP CM+ L D +++ HL H R + FL +G+
Sbjct: 225 ---------------REIDTVVPELFPPCMKALLDDVQKGEHLPHHSRFAITSFLTSIGM 269
Query: 312 RMEDALAFWKAEFSQKVGAERFDKEYA-YSIRHNYGKEGKRTDYTPYSCQKIISSTPGVG 370
++ + ++ S F +E Y H G E T+Y+P SC + S V
Sbjct: 270 TTDEIVDLYRVNSS-------FGEEMTRYQTEHIRG-ETSPTEYSPPSCATMQSYGDCVN 321
Query: 371 DHHGC 375
C
Sbjct: 322 KDDLC 326
>gi|385805161|ref|YP_005841559.1| DNA primase large subunit [Fervidicoccus fontis Kam940]
gi|383795024|gb|AFH42107.1| DNA primase large subunit [Fervidicoccus fontis Kam940]
Length = 387
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 42/87 (48%), Gaps = 10/87 (11%)
Query: 277 FPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWK--AEFSQKVGAERFD 334
FP C++++ K +L H R Q+ FL + + ++D L +K ++++K+
Sbjct: 268 FPPCIKNILRKASNGENLSHQERFQIATFLLNLNISIDDVLEVFKQLPDYNEKIA----- 322
Query: 335 KEYAYSIRHNYGKEGKRTDYTPYSCQK 361
Y + H GK G Y PY C+K
Sbjct: 323 ---RYQVEHLAGKRGSGIKYKPYDCEK 346
>gi|156936873|ref|YP_001434669.1| DNA primase large subunit [Ignicoccus hospitalis KIN4/I]
gi|156565857|gb|ABU81262.1| DNA primase large subunit [Ignicoccus hospitalis KIN4/I]
Length = 356
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 64/144 (44%), Gaps = 24/144 (16%)
Query: 237 DRLTPIVEALSMSYLGPDYSQTKEFGEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKH 296
+R ++E L Y+ S +I IK + A P C+R ++++ + +L H
Sbjct: 207 ERFKGVLEELKTKYMAKRSS-----ADIKIKGFEPRA---LPPCVRSIYERALQGDNLSH 258
Query: 297 GGRMQLGLFLKGVGLRMEDALAFWK--AEFSQKVGAERFDKEYAYSIRHNYGKEGKRTDY 354
R L FL VG +ED L +K ++++++ Y + H G G Y
Sbjct: 259 QERFTLATFLLNVGKDVEDVLEVFKNMPDYNERIA--------RYQVEHLAGLRGSHKKY 310
Query: 355 TPYSCQKIISS--TPG----VGDH 372
+P SC+ ++S PG GDH
Sbjct: 311 SPPSCKTLVSWGLCPGKDECKGDH 334
>gi|448388530|ref|ZP_21565305.1| DNA primase large subunit [Haloterrigena salina JCM 13891]
gi|445670285|gb|ELZ22888.1| DNA primase large subunit [Haloterrigena salina JCM 13891]
Length = 360
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 49/110 (44%), Gaps = 9/110 (8%)
Query: 267 KDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWKAEFSQ 326
+D+D + FP CM+ L D +++ HL H R + FL +G+ ++ + ++ S
Sbjct: 221 QDIDTVVPDLFPPCMKALLDDIQKGEHLPHHSRFAITAFLTSIGMTTDEIVELYRVNSS- 279
Query: 327 KVGAERFDKEYA-YSIRHNYGKEGKRTDYTPYSCQKIISSTPGVGDHHGC 375
F +E Y H G + T+Y+P SC + S V C
Sbjct: 280 ------FGEEMTRYQTDHIRG-DSSPTEYSPPSCATMQSYGDCVNKDDLC 322
>gi|119719535|ref|YP_920030.1| DNA primase, large subunit [Thermofilum pendens Hrk 5]
gi|119524655|gb|ABL78027.1| DNA primase large subunit [Thermofilum pendens Hrk 5]
Length = 356
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 60/148 (40%), Gaps = 19/148 (12%)
Query: 255 YSQTKEFGEISIKDLDQL---ARSS--------FPLCMRHLFDKLREDHHLKHGGRMQLG 303
YS +E I K ++L AR++ FP C+R + + +L H R L
Sbjct: 209 YSAVEEIASIWSKQREELLTYARNASKGKREDLFPPCIRAIIQDISAGKNLPHSARFALA 268
Query: 304 LFLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQKII 363
FL VG +++ L +K + R Y + H G G RT Y PY C +
Sbjct: 269 SFLLSVGFSVDEVLEVFKLSPDYREDIAR------YQVEHIAGMRGSRTKYLPYKCDNMR 322
Query: 364 SSTPGVGDHHGCPYRHFSEENLRAALGR 391
S G+ RH + +AA GR
Sbjct: 323 SY--GLCRWRCENIRHPLQFFFKAARGR 348
>gi|154150936|ref|YP_001404554.1| DNA primase large subunit [Methanoregula boonei 6A8]
gi|153999488|gb|ABS55911.1| DNA primase, large subunit [Methanoregula boonei 6A8]
Length = 362
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 50/111 (45%), Gaps = 9/111 (8%)
Query: 251 LGPDYSQTKE-FGEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGV 309
L P ++ K+ + E ++ ++ S+FP CM+ L L +L H GR L FL +
Sbjct: 207 LAPKAAEIKKVYQEQMLRQFGKVEESAFPPCMQALISALAAGTNLTHAGRFSLTAFLHNI 266
Query: 310 GLRMEDALAFWKAEFSQKVGAERFDKEYA-YSIRHNYGKEGKRTDYTPYSC 359
G+ + + + FD E Y + H G+ G T+YT +C
Sbjct: 267 GMDLTGIAELY-------ARSPDFDIEKTMYQVEHITGRGGTGTEYTTPAC 310
>gi|15791070|ref|NP_280894.1| DNA primase large subunit [Halobacterium sp. NRC-1]
gi|169236820|ref|YP_001690020.1| DNA primase large subunit [Halobacterium salinarum R1]
gi|34395829|sp|Q9HN47.1|PRIL_HALSA RecName: Full=Probable DNA primase large subunit
gi|226705020|sp|B0R7F5.1|PRIL_HALS3 RecName: Full=Probable DNA primase large subunit
gi|10581667|gb|AAG20374.1| conserved hypothetical protein [Halobacterium sp. NRC-1]
gi|167727886|emb|CAP14674.1| DNA primase large subunit [Halobacterium salinarum R1]
Length = 360
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 67/147 (45%), Gaps = 13/147 (8%)
Query: 222 LTNRKWTSTIREQERDRLT-----PIVEALSMSYLGPDYSQTKEFGEISI-KDLDQLARS 275
+T+ + + IRE R+R+ + + ++ + P + ++ + +++D +
Sbjct: 173 VTDAELDTLIREAIRERVADGLPLSVPDQIADALDEPVAAIQDALADLDLTREIDTVVPE 232
Query: 276 SFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWKAEFSQKVGAERFDK 335
FP CM+HL D+++ HL H R + FL VGL ++ + + E + G E
Sbjct: 233 LFPPCMKHLLDQVQRGDHLPHHARFAITSFLSNVGLSTDEIVDIY--EVNPGFGEEM--- 287
Query: 336 EYAYSIRHNYGKEGKRTDYTPYSCQKI 362
Y H G + T+YT SC +
Sbjct: 288 -TRYQTDHIQG-DSSPTEYTAPSCATM 312
>gi|448354651|ref|ZP_21543407.1| DNA primase large subunit [Natrialba hulunbeirensis JCM 10989]
gi|445637539|gb|ELY90689.1| DNA primase large subunit [Natrialba hulunbeirensis JCM 10989]
Length = 443
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 48/99 (48%), Gaps = 9/99 (9%)
Query: 267 KDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWKAEFSQ 326
+++D + FP CM+ L D++++ HL H R + FL +G+ ++ + ++ S
Sbjct: 261 REIDTVVPELFPPCMKALLDQVQKGEHLPHHSRFAITAFLSSIGMTTDEIVDLYRVNSS- 319
Query: 327 KVGAERFDKEYA-YSIRHNYGKEGKRTDYTPYSCQKIIS 364
F +E Y H G E T+Y+P SC + S
Sbjct: 320 ------FGEEMTRYQTDHIRG-ETSPTEYSPPSCATMQS 351
>gi|433637254|ref|YP_007283014.1| DNA primase, large subunit [Halovivax ruber XH-70]
gi|433289058|gb|AGB14881.1| DNA primase, large subunit [Halovivax ruber XH-70]
Length = 435
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 48/99 (48%), Gaps = 7/99 (7%)
Query: 266 IKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWKAEFS 325
++++D + FP CM+ L D +++ HL H R + FL +G+ ++ + +
Sbjct: 296 VREIDTVVPELFPPCMKALLDDIQKGEHLPHHSRFAITAFLSSIGMTTDEIVELY----- 350
Query: 326 QKVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQKIIS 364
+V + ++ Y H G E T+Y+P SC + S
Sbjct: 351 -RVNSAFGEQMTRYQTDHIRG-ETSPTEYSPPSCATMQS 387
>gi|448375690|ref|ZP_21559092.1| DNA primase large subunit [Halovivax asiaticus JCM 14624]
gi|445658328|gb|ELZ11147.1| DNA primase large subunit [Halovivax asiaticus JCM 14624]
Length = 433
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 48/99 (48%), Gaps = 7/99 (7%)
Query: 266 IKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWKAEFS 325
++++D + FP CM+ L D +++ HL H R + FL +G+ ++ + +
Sbjct: 294 VREIDTVVPELFPPCMKALLDDIQKGEHLPHHSRFAITAFLSSIGMTTDEIVELY----- 348
Query: 326 QKVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQKIIS 364
+V + ++ Y H G E T+Y+P SC + S
Sbjct: 349 -RVNSAFGEQMTRYQTDHIRG-ETSPTEYSPPSCATMQS 385
>gi|444724978|gb|ELW65562.1| DNA primase large subunit [Tupaia chinensis]
Length = 150
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Query: 396 SRAMEDVVDKVRNRHYQLACTLTFEAVHS-SSCDAGINHPNQYFSDSHKIL 445
S + ++D V+ HYQ+AC FE +H+ C +NHPNQ+F +S +IL
Sbjct: 48 SMPLARILDLVKGTHYQVACQKYFEMIHNVDDCGFSLNHPNQFFFESQRIL 98
>gi|390479626|ref|XP_003735755.1| PREDICTED: DNA primase large subunit-like [Callithrix jacchus]
Length = 112
Score = 48.5 bits (114), Expect = 0.006, Method: Composition-based stats.
Identities = 20/47 (42%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Query: 400 EDVVDKVRNRHYQLACTLTFEAVHS-SSCDAGINHPNQYFSDSHKIL 445
+ ++D V+ HYQ+AC FE +H+ C +NHPNQ+F +S +IL
Sbjct: 14 QKILDLVKGTHYQVACQKYFEMIHNVDDCGFSLNHPNQFFCESQRIL 60
>gi|384381532|gb|AFH78579.1| DNA primase large subunit, partial [Homo sapiens]
Length = 46
Score = 48.5 bits (114), Expect = 0.006, Method: Composition-based stats.
Identities = 19/45 (42%), Positives = 32/45 (71%)
Query: 176 VPFEEVPELVAGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKAL 220
+PF + +L GR+VY+ G AYV + +V++++ +FR+ LSKAL
Sbjct: 1 IPFADALDLFRGRKVYLEDGFAYVPLKDIVAIILNEFRAKLSKAL 45
>gi|448723027|ref|ZP_21705553.1| DNA primase large subunit [Halococcus hamelinensis 100A6]
gi|445788322|gb|EMA39040.1| DNA primase large subunit [Halococcus hamelinensis 100A6]
Length = 362
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 47/100 (47%), Gaps = 11/100 (11%)
Query: 267 KDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWKAE--F 324
+D+D + FP CM+ L D +++ HL H R + FL +G+ ++ + + F
Sbjct: 221 RDIDTVVPERFPPCMKALLDGVQKGDHLAHHSRFAITAFLASIGMTTDEIVDLYTVNPGF 280
Query: 325 SQKVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQKIIS 364
++ + Y H G+ G T+Y+P SC + S
Sbjct: 281 AEDI--------TRYQTDHIRGETGP-TEYSPPSCATMQS 311
>gi|294495071|ref|YP_003541564.1| DNA primase, large subunit [Methanohalophilus mahii DSM 5219]
gi|292666070|gb|ADE35919.1| DNA primase, large subunit [Methanohalophilus mahii DSM 5219]
Length = 351
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 52/114 (45%), Gaps = 14/114 (12%)
Query: 262 GEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWK 321
G++ + ++ FP C+ + + +R +L H R + FL G+G+ ++D + +
Sbjct: 213 GDVENGQMGEVDSKLFPPCINYAINNVRTGVNLAHSMRFAMTSFLTGIGMTIDDIINMFN 272
Query: 322 AEFSQKVGAERFDKEYA-YSIRHNYGKEGKRTDYTPYSCQKIISSTPGVGDHHG 374
+ FD+E Y I H G G T YTP SC S+ G+ HG
Sbjct: 273 V-------SPDFDEEKTRYQIEHIAGSSG--TKYTPPSC----STMKTYGNCHG 313
>gi|284163454|ref|YP_003401733.1| DNA primase, large subunit [Haloterrigena turkmenica DSM 5511]
gi|284013109|gb|ADB59060.1| DNA primase, large subunit [Haloterrigena turkmenica DSM 5511]
Length = 360
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 47/99 (47%), Gaps = 9/99 (9%)
Query: 267 KDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWKAEFSQ 326
+D+D + FP CM+ L D +++ HL H R + FL +G+ ++ + ++ S
Sbjct: 221 QDIDTVVPDLFPPCMKALLDDIQKGEHLPHHSRFAITAFLTSIGMTTDEIVDLYRINSS- 279
Query: 327 KVGAERFDKEYA-YSIRHNYGKEGKRTDYTPYSCQKIIS 364
F +E Y H G + T+Y+P SC + S
Sbjct: 280 ------FGEEMTRYQTDHIRG-DSSPTEYSPPSCATMQS 311
>gi|409723575|ref|ZP_11270758.1| DNA primase large subunit, partial [Halococcus hamelinensis 100A6]
Length = 162
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 47/100 (47%), Gaps = 11/100 (11%)
Query: 267 KDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWKAE--F 324
+D+D + FP CM+ L D +++ HL H R + FL +G+ ++ + + F
Sbjct: 21 RDIDTVVPERFPPCMKALLDGVQKGDHLAHHSRFAITAFLASIGMTTDEIVDLYTVNPGF 80
Query: 325 SQKVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQKIIS 364
++ + Y H G+ G T+Y+P SC + S
Sbjct: 81 AEDI--------TRYQTDHIRGETGP-TEYSPPSCATMQS 111
>gi|390938620|ref|YP_006402358.1| DNA primase large subunit [Desulfurococcus fermentans DSM 16532]
gi|390191727|gb|AFL66783.1| DNA primase large subunit [Desulfurococcus fermentans DSM 16532]
Length = 380
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 48/107 (44%), Gaps = 10/107 (9%)
Query: 262 GEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWK 321
G + ++ L + P C+ + + + H R L FL +GL + L +++
Sbjct: 252 GTMETSEVGGLIPEALPPCISRIISIVESGGNPSHEERFNLAAFLANIGLDADSILEYFR 311
Query: 322 --AEFSQKVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQKIISST 366
+F++K+ Y + H G +G R Y PYSC+++ S+
Sbjct: 312 KTPDFNEKIAR--------YQVEHISGMKGSRKKYMPYSCERMKSTN 350
>gi|354609699|ref|ZP_09027655.1| DNA primase large subunit [Halobacterium sp. DL1]
gi|353194519|gb|EHB60021.1| DNA primase large subunit [Halobacterium sp. DL1]
Length = 359
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 46/97 (47%), Gaps = 9/97 (9%)
Query: 267 KDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWKAEFSQ 326
+++D + FP CM+HL D+++ HL H R + FL VGL ++ + +S
Sbjct: 222 REIDTVVPELFPPCMQHLLDQVQRGEHLAHHSRFAITAFLANVGLTTDEIVEI----YSV 277
Query: 327 KVGAERFDKEYA-YSIRHNYGKEGKRTDYTPYSCQKI 362
G F +E Y H G E T+YT SC +
Sbjct: 278 NPG---FGEEMTRYQTDHIRG-ESSPTEYTAPSCATM 310
>gi|257387056|ref|YP_003176829.1| DNA primase, large subunit [Halomicrobium mukohataei DSM 12286]
gi|257169363|gb|ACV47122.1| DNA primase, large subunit [Halomicrobium mukohataei DSM 12286]
Length = 362
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 47/98 (47%), Gaps = 7/98 (7%)
Query: 267 KDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWKAEFSQ 326
+++D + FP CM+HL D +++ HL+H R L FL +G+ ++ + ++
Sbjct: 221 REIDTVVPDLFPPCMQHLLDAVQKGEHLEHHSRFALAAFLTSIGMTTDEIVELFQVNPGF 280
Query: 327 KVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQKIIS 364
A R Y + H G + T+Y+ SC + S
Sbjct: 281 GEEATR------YQVDHIRG-DTSPTEYSTPSCATMQS 311
>gi|300709779|ref|YP_003735593.1| DNA primase, large subunit [Halalkalicoccus jeotgali B3]
gi|448297451|ref|ZP_21487497.1| DNA primase large subunit [Halalkalicoccus jeotgali B3]
gi|299123462|gb|ADJ13801.1| DNA primase, large subunit [Halalkalicoccus jeotgali B3]
gi|445579760|gb|ELY34153.1| DNA primase large subunit [Halalkalicoccus jeotgali B3]
Length = 361
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 51/119 (42%), Gaps = 10/119 (8%)
Query: 259 KEFGEISI-KDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRMEDAL 317
K E+ + +++D + FP CM+ L D +++ HL H R + FL +G+ ++ +
Sbjct: 212 KTLAEMDLTREIDTVVPERFPPCMKALLDSVQKGEHLGHHSRFAITAFLTSIGMSTDEII 271
Query: 318 AFWKAEFSQKVGAERFDKEYA-YSIRHNYGKEGKRTDYTPYSCQKIISSTPGVGDHHGC 375
+ F +E Y H G E T+YTP SC + S V C
Sbjct: 272 DLYMVNSG-------FGEEMTRYQTDHIRG-ETSPTEYTPPSCATMQSYGDCVNKDEIC 322
>gi|407463880|ref|YP_006774762.1| DNA primase large subunit [Candidatus Nitrosopumilus sp. AR2]
gi|407047068|gb|AFS81820.1| DNA primase large subunit [Candidatus Nitrosopumilus sp. AR2]
Length = 341
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 90/209 (43%), Gaps = 34/209 (16%)
Query: 157 QVARSFDQ-PLPTADAIFYKVPFEEVPELVAGRRVYIHKGHAYVAMHQVVSLVVTQFRSN 215
QV +S D +P +D + + + F E + R ++ G +++ H+ V L+ + +
Sbjct: 138 QVEKSDDYFIIPVSDYLKHSINFHEREWKLINR--HVENGQVFLSPHETVRLIRKELGTY 195
Query: 216 LSKALILTNRKWTSTIREQERDRLTPIVEALSMSYLGPDYSQTKEFGEISIKDLDQLARS 275
++ +I N K T T+ D + +V S +K+F ++
Sbjct: 196 INSKII--NAK-TPTMIPGFEDSVNKLV------------SLSKKFTIYTV------TTG 234
Query: 276 SFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWK--AEFSQKVGAERF 333
+P C++H D L + +L H GR L FL G ++ +K +++++V
Sbjct: 235 EYPPCVKHAIDILEKGENLPHSGRFMLATFLLSKGQTVQQIAPLFKNAPDYNERVT---- 290
Query: 334 DKEYAYSIRHNYGKEGKRTDYTPYSCQKI 362
Y + H G G T Y+ SC+K+
Sbjct: 291 ----LYQLNHLAGTSGSGTQYSCPSCEKL 315
>gi|448351004|ref|ZP_21539814.1| DNA primase large subunit [Natrialba taiwanensis DSM 12281]
gi|445635192|gb|ELY88363.1| DNA primase large subunit [Natrialba taiwanensis DSM 12281]
Length = 395
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 46/99 (46%), Gaps = 9/99 (9%)
Query: 267 KDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWKAEFSQ 326
+D+D + FP CM+ L D++++ L H R + FL +G+ + + ++ S
Sbjct: 243 RDIDTVVPELFPPCMQALLDQIQKGEPLPHHSRFAITAFLSSIGMTTDQIVDLYRVNSS- 301
Query: 327 KVGAERFDKEYA-YSIRHNYGKEGKRTDYTPYSCQKIIS 364
F +E Y H G E T+Y+P SC + S
Sbjct: 302 ------FGEEMTRYQTDHIRG-ETSPTEYSPPSCATMQS 333
>gi|296242452|ref|YP_003649939.1| DNA primase large subunit [Thermosphaera aggregans DSM 11486]
gi|296095036|gb|ADG90987.1| DNA primase, large subunit [Thermosphaera aggregans DSM 11486]
Length = 386
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 55/116 (47%), Gaps = 17/116 (14%)
Query: 267 KDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWK--AEF 324
+++ + +FP C++ + ++ + H R L FL +G +ED LA ++ A+F
Sbjct: 249 EEVSGVVEEAFPPCIKKIISSIKSGGNPSHEERFNLAAFLVNIGYSVEDVLAVFRTTADF 308
Query: 325 SQKVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQKIISSTPGVGDHHGCPYRHF 380
+K+ Y + H G G R Y PYSC ++ S +G CP +++
Sbjct: 309 DEKIA--------RYQVEHIAGLRGSRRKYAPYSCDRLKS----IG---ACPIQNY 349
>gi|429191459|ref|YP_007177137.1| DNA primase, large subunit [Natronobacterium gregoryi SP2]
gi|448325413|ref|ZP_21514804.1| DNA primase large subunit [Natronobacterium gregoryi SP2]
gi|429135677|gb|AFZ72688.1| DNA primase, large subunit [Natronobacterium gregoryi SP2]
gi|445615371|gb|ELY69019.1| DNA primase large subunit [Natronobacterium gregoryi SP2]
Length = 360
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 49/110 (44%), Gaps = 9/110 (8%)
Query: 267 KDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWKAEFSQ 326
+++D + FP CM+ L D +++ HL H R + FL +G+ ++ + ++ S
Sbjct: 221 REIDTVVPELFPPCMKALLDDIQKGEHLPHHSRFAITSFLTSIGMTTDEVVDLYRVNSS- 279
Query: 327 KVGAERFDKEYA-YSIRHNYGKEGKRTDYTPYSCQKIISSTPGVGDHHGC 375
F +E Y H G + T+Y+P SC + S V C
Sbjct: 280 ------FGEEMTRYQTDHIRG-DSSPTEYSPPSCATMQSYGDCVNKDDLC 322
>gi|402867360|ref|XP_003897825.1| PREDICTED: DNA primase large subunit-like, partial [Papio anubis]
Length = 99
Score = 47.4 bits (111), Expect = 0.015, Method: Composition-based stats.
Identities = 19/45 (42%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Query: 402 VVDKVRNRHYQLACTLTFEAVHS-SSCDAGINHPNQYFSDSHKIL 445
++D + HYQ+AC FE +H+ C +NHPNQ+F +S +IL
Sbjct: 1 ILDLAKGTHYQVACQKYFEMIHNVDDCGFSLNHPNQFFCESQRIL 45
>gi|344210422|ref|YP_004794742.1| DNA primase large subunit [Haloarcula hispanica ATCC 33960]
gi|343781777|gb|AEM55754.1| DNA primase large subunit [Haloarcula hispanica ATCC 33960]
Length = 357
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 48/98 (48%), Gaps = 7/98 (7%)
Query: 267 KDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWKAEFSQ 326
+++D + FP CM+ L D++++ HL+H R + FL G+G+ ++ + ++
Sbjct: 220 REIDTVVPELFPPCMKSLLDRVQKGEHLEHHSRFAIATFLIGIGMTTDEIVDLFQVNPGF 279
Query: 327 KVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQKIIS 364
A R Y + H G E T+Y+ +C + S
Sbjct: 280 GEEATR------YQVDHIRG-ETSPTEYSTPACSTMQS 310
>gi|335437217|ref|ZP_08559999.1| DNA primase large subunit [Halorhabdus tiamatea SARL4B]
gi|334896347|gb|EGM34498.1| DNA primase large subunit [Halorhabdus tiamatea SARL4B]
Length = 361
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 59/126 (46%), Gaps = 14/126 (11%)
Query: 241 PIVEALSMSYLGPDYSQTKE-FGEISI-KDLDQLARSSFPLCMRHLFDKLREDHHLKHGG 298
PI +AL+ D + +E E+ + +++D + FP CM L D++++ HL H
Sbjct: 204 PIADALA-----EDVAAVEERLDELDLTREIDTVVPELFPPCMTALLDQVQKGEHLAHHS 258
Query: 299 RMQLGLFLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTDYTPYS 358
R + FL +G+ +D + + E + G E Y H G E T+Y+P S
Sbjct: 259 RFAITSFLASIGMETDDIVDLY--EVNPGFGEEM----TRYQTDHIRG-ETSPTEYSPPS 311
Query: 359 CQKIIS 364
C + S
Sbjct: 312 CATMQS 317
>gi|383320550|ref|YP_005381391.1| DNA primase, large subunit [Methanocella conradii HZ254]
gi|379321920|gb|AFD00873.1| Eukaryotic-type DNA primase, large subunit [Methanocella conradii
HZ254]
Length = 338
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 55/115 (47%), Gaps = 10/115 (8%)
Query: 262 GEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWK 321
G +S+ +++R +FP CM++L +L++ +L H R L FL +G ++ + ++
Sbjct: 208 GRMSLDVGGEVSREAFPPCMKYLLSELQKGVNLPHTARFALTSFLANIGYDKDEIMELYR 267
Query: 322 AEFSQKVGAERFDKEYA-YSIRHNYGKEGKRTDYTPYSCQKIISSTPGVGDHHGC 375
A F ++ Y + H G G T+YT SC+ +++ G C
Sbjct: 268 M-------APDFREDLTRYQVEHIMGSGG--TEYTSPSCKTMVTYGNCYGKDGLC 313
>gi|399576143|ref|ZP_10769900.1| DNA primase, large subunit [Halogranum salarium B-1]
gi|399238854|gb|EJN59781.1| DNA primase, large subunit [Halogranum salarium B-1]
Length = 362
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 32/56 (57%)
Query: 266 IKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWK 321
++ +D +A FP CM HL D++R D+ L L FL G+G+ ++ + F++
Sbjct: 236 VRQIDTVAPDLFPPCMSHLLDRVRRDNELDAHSTFALTAFLTGIGMDTDEVVQFYR 291
>gi|336252943|ref|YP_004596050.1| DNA primase large subunit [Halopiger xanaduensis SH-6]
gi|335336932|gb|AEH36171.1| DNA primase large subunit [Halopiger xanaduensis SH-6]
Length = 364
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 48/99 (48%), Gaps = 9/99 (9%)
Query: 267 KDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWKAEFSQ 326
+++D + FP CM+ L D++++ HL H R + FL +G+ ++ + ++ S
Sbjct: 224 REIDTVVPDLFPPCMKALLDQIQKGEHLPHHSRFAITAFLTSIGMTTDEIVDLYRVNSS- 282
Query: 327 KVGAERFDKEYA-YSIRHNYGKEGKRTDYTPYSCQKIIS 364
F +E Y H G + T+Y+P SC + S
Sbjct: 283 ------FGEEMTRYQTDHIRG-DTSPTEYSPPSCATMQS 314
>gi|347524252|ref|YP_004781822.1| DNA primase, large subunit [Pyrolobus fumarii 1A]
gi|343461134|gb|AEM39570.1| DNA primase, large subunit [Pyrolobus fumarii 1A]
Length = 409
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 43/91 (47%), Gaps = 10/91 (10%)
Query: 276 SFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWK--AEFSQKVGAERF 333
+FP CM + D+ R HL H R + FL +G+ ++ + ++ +F++KV
Sbjct: 259 AFPPCMADIIDRARRGEHLSHHERFAIATFLLNLGVDIDRVVDVFRNLPDFNEKVA---- 314
Query: 334 DKEYAYSIRHNYGKEGKRTDYTPYSCQKIIS 364
Y + H G G Y YSC+K+ S
Sbjct: 315 ----RYQVEHLAGLRGSGKKYRTYSCEKMRS 341
>gi|397772394|ref|YP_006539940.1| DNA primase, large subunit [Natrinema sp. J7-2]
gi|397681487|gb|AFO55864.1| DNA primase, large subunit [Natrinema sp. J7-2]
Length = 362
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 49/110 (44%), Gaps = 9/110 (8%)
Query: 267 KDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWKAEFSQ 326
+D+D + FP CM+ L D++++ HL H R + FL +G+ ++ + ++ S
Sbjct: 223 QDIDTVVPDLFPPCMKALLDQIQKGEHLSHHSRFAITAFLTSIGMTTDEIVDLYRVNSS- 281
Query: 327 KVGAERFDKEYA-YSIRHNYGKEGKRTDYTPYSCQKIISSTPGVGDHHGC 375
F +E Y H G + T+Y+ SC + S V C
Sbjct: 282 ------FGEEMTRYQTDHIRG-DSSPTEYSAPSCATMQSYGDCVNKDDLC 324
>gi|407461565|ref|YP_006772882.1| DNA primase large subunit [Candidatus Nitrosopumilus koreensis AR1]
gi|407045187|gb|AFS79940.1| DNA primase large subunit [Candidatus Nitrosopumilus koreensis AR1]
Length = 341
Score = 46.6 bits (109), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 41/199 (20%), Positives = 83/199 (41%), Gaps = 33/199 (16%)
Query: 166 LPTADAIFYKVPFEEVPELVAGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNR 225
+P +D + + + F E + R ++ G ++ H+ V L+ + + ++ ++ N
Sbjct: 148 IPVSDYLKHSINFHEREWKLTNR--HVENGQVFLTPHETVRLIRKELGTYINSKIV--NA 203
Query: 226 KWTSTIREQERDRLTPIVEALSMSYLGPDYSQTKEFGEISIKDLDQLARSSFPLCMRHLF 285
K T T+ D + +V +K+F ++ +P C++H
Sbjct: 204 K-TPTMIPGFEDSVNKLVML------------SKKFSTFTV------TTGEYPPCIKHAI 244
Query: 286 DKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWK--AEFSQKVGAERFDKEYAYSIRH 343
D L + +L H GR L FL G ++ +K +++++V Y + H
Sbjct: 245 DILEKGENLPHSGRFMLATFLLSKGQSVQQIAPLFKNAPDYNERVT--------LYQLNH 296
Query: 344 NYGKEGKRTDYTPYSCQKI 362
G G T Y+ SC+K+
Sbjct: 297 LAGTSGSGTQYSCPSCEKL 315
>gi|448724991|ref|ZP_21707483.1| DNA primase large subunit [Halococcus morrhuae DSM 1307]
gi|445801574|gb|EMA51904.1| DNA primase large subunit [Halococcus morrhuae DSM 1307]
Length = 359
Score = 46.2 bits (108), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 45/100 (45%), Gaps = 11/100 (11%)
Query: 267 KDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWKAE--F 324
+D+D + FP CM+ L D +++ HL H R + FL +G+ ++ + + F
Sbjct: 219 RDIDTVVPDRFPPCMKALLDSVQKGEHLPHHSRFAITSFLTSIGMSTDEIIDLYMVNPGF 278
Query: 325 SQKVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQKIIS 364
+ + Y H G E T+Y+P SC + S
Sbjct: 279 GEDI--------TRYQTDHIRG-ETSPTEYSPPSCATMQS 309
>gi|320101120|ref|YP_004176712.1| DNA primase large subunit [Desulfurococcus mucosus DSM 2162]
gi|319753472|gb|ADV65230.1| DNA primase, large subunit [Desulfurococcus mucosus DSM 2162]
Length = 375
Score = 46.2 bits (108), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 44/96 (45%), Gaps = 10/96 (10%)
Query: 271 QLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWK--AEFSQKV 328
++A FP C+ + + + H R L FL +GL ++ L +++ +F++K+
Sbjct: 248 EVAPEKFPPCILRIIGIIESGGNPSHEERFNLAAFLANIGLDVDSILEYFRKTPDFNEKI 307
Query: 329 GAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQKIIS 364
Y I H G G Y PYSC+K+ S
Sbjct: 308 A--------RYQIEHISGVRGSGKKYMPYSCEKMKS 335
>gi|393224899|gb|EJD33108.1| hypothetical protein AURDEDRAFT_77205, partial [Auricularia
delicata TFB-10046 SS5]
Length = 55
Score = 46.2 bits (108), Expect = 0.033, Method: Composition-based stats.
Identities = 20/49 (40%), Positives = 30/49 (61%)
Query: 264 ISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLR 312
I+ +++LA+ FP+C+R+L D L H KH GR+ G+FLK R
Sbjct: 1 ITADMINELAQKHFPVCVRNLHDNLYTVKHFKHTGRLHYGVFLKARACR 49
>gi|448342216|ref|ZP_21531168.1| DNA primase large subunit [Natrinema gari JCM 14663]
gi|445626207|gb|ELY79556.1| DNA primase large subunit [Natrinema gari JCM 14663]
Length = 361
Score = 46.2 bits (108), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 49/110 (44%), Gaps = 9/110 (8%)
Query: 267 KDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWKAEFSQ 326
+D+D + FP CM+ L D++++ HL H R + FL +G+ ++ + ++ S
Sbjct: 222 QDIDTVVPDLFPPCMKALLDQIQKGEHLSHHSRFAITAFLTSIGMTTDEIVDLYRVNSS- 280
Query: 327 KVGAERFDKEYA-YSIRHNYGKEGKRTDYTPYSCQKIISSTPGVGDHHGC 375
F +E Y H G + T+Y+ SC + S V C
Sbjct: 281 ------FGEEMTRYQTDHIRG-DSSPTEYSAPSCATMQSYGDCVNKDDLC 323
>gi|448346748|ref|ZP_21535630.1| DNA primase large subunit [Natrinema altunense JCM 12890]
gi|445632010|gb|ELY85233.1| DNA primase large subunit [Natrinema altunense JCM 12890]
Length = 361
Score = 46.2 bits (108), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 49/110 (44%), Gaps = 9/110 (8%)
Query: 267 KDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWKAEFSQ 326
+D+D + FP CM+ L D++++ HL H R + FL +G+ ++ + ++ S
Sbjct: 222 QDIDTVVPDLFPPCMKALLDQIQKGEHLSHHSRFAITAFLTSIGMTTDEIVDLYRVNSS- 280
Query: 327 KVGAERFDKEYA-YSIRHNYGKEGKRTDYTPYSCQKIISSTPGVGDHHGC 375
F +E Y H G + T+Y+ SC + S V C
Sbjct: 281 ------FGEEMTRYQTDHIRG-DSSPTEYSAPSCATMQSYGDCVNKDDLC 323
>gi|448337592|ref|ZP_21526667.1| DNA primase large subunit [Natrinema pallidum DSM 3751]
gi|445625169|gb|ELY78535.1| DNA primase large subunit [Natrinema pallidum DSM 3751]
Length = 362
Score = 46.2 bits (108), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 47/99 (47%), Gaps = 9/99 (9%)
Query: 267 KDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWKAEFSQ 326
+D+D + FP CM+ L D++++ HL H R + FL +G+ ++ + ++ S
Sbjct: 223 QDIDTVVPDLFPPCMKALLDQIQKGEHLSHHSRFAITAFLTSIGMTTDEIVDLYRVNSS- 281
Query: 327 KVGAERFDKEYA-YSIRHNYGKEGKRTDYTPYSCQKIIS 364
F +E Y H G + T+Y+ SC + S
Sbjct: 282 ------FGEEMTRYQTDHIRG-DSSPTEYSAPSCATMQS 313
>gi|448330282|ref|ZP_21519565.1| DNA primase large subunit [Natrinema versiforme JCM 10478]
gi|445611961|gb|ELY65702.1| DNA primase large subunit [Natrinema versiforme JCM 10478]
Length = 360
Score = 45.8 bits (107), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 48/110 (43%), Gaps = 9/110 (8%)
Query: 267 KDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWKAEFSQ 326
+D+D + FP CM+ L D++++ HL H R + FL +G+ + + ++ S
Sbjct: 221 QDIDTVVPDLFPPCMKALLDQIQKGEHLPHHSRFAITAFLTSIGMTTDQVVDLYRVNSS- 279
Query: 327 KVGAERFDKEYA-YSIRHNYGKEGKRTDYTPYSCQKIISSTPGVGDHHGC 375
F +E Y H G + T+Y+ SC + S V C
Sbjct: 280 ------FGEEMTRYQTDHIRG-DSSPTEYSAPSCATMQSYGDCVNKDDLC 322
>gi|161527577|ref|YP_001581403.1| DNA primase large subunit [Nitrosopumilus maritimus SCM1]
gi|160338878|gb|ABX11965.1| DNA primase, large subunit [Nitrosopumilus maritimus SCM1]
Length = 341
Score = 45.8 bits (107), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 41/199 (20%), Positives = 83/199 (41%), Gaps = 33/199 (16%)
Query: 166 LPTADAIFYKVPFEEVPELVAGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNR 225
+P +D + + + F E + R ++ G ++ H+ V L+ + + ++ ++ N
Sbjct: 148 IPVSDYLKHSINFHEREWKLINR--HVENGQVFLTPHETVRLIRKELGTYINSKIV--NA 203
Query: 226 KWTSTIREQERDRLTPIVEALSMSYLGPDYSQTKEFGEISIKDLDQLARSSFPLCMRHLF 285
K T T+ D + +V +K+F ++ +P C++H
Sbjct: 204 K-TPTMIPGFEDSVNKLVML------------SKKFSTFTV------TTGEYPPCIKHAI 244
Query: 286 DKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWK--AEFSQKVGAERFDKEYAYSIRH 343
D L + +L H GR L FL G ++ +K +++++V Y + H
Sbjct: 245 DILEKGENLPHSGRFMLATFLLSKGQSVQQIAPLFKNAPDYNERVT--------LYQLNH 296
Query: 344 NYGKEGKRTDYTPYSCQKI 362
G G T Y+ SC+K+
Sbjct: 297 LAGTSGSGTQYSCPSCEKL 315
>gi|55379451|ref|YP_137301.1| DNA primase large subunit [Haloarcula marismortui ATCC 43049]
gi|62287013|sp|Q5UYQ8.1|PRIL_HALMA RecName: Full=Probable DNA primase large subunit
gi|55232176|gb|AAV47595.1| eukaryotic-type DNA primase large subunit [Haloarcula marismortui
ATCC 43049]
Length = 358
Score = 45.8 bits (107), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 48/98 (48%), Gaps = 7/98 (7%)
Query: 267 KDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWKAEFSQ 326
+++D + FP CM+ L D++++ HL+H R + FL G+G+ ++ + ++
Sbjct: 221 REIDTVVPELFPPCMKSLLDQVQKGEHLEHHSRFAIATFLVGIGMTTDEIVDLFQVNPGF 280
Query: 327 KVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQKIIS 364
A R Y + H G + T+Y+ +C + S
Sbjct: 281 GEEATR------YQVDHIRG-DTSPTEYSTPACSTMQS 311
>gi|147919534|ref|YP_686726.1| DNA primase large subunit [Methanocella arvoryzae MRE50]
gi|121687854|sp|Q0W2J3.1|PRIL_UNCMA RecName: Full=Probable DNA primase large subunit
gi|110622122|emb|CAJ37400.1| DNA primase, large subunit [Methanocella arvoryzae MRE50]
Length = 366
Score = 45.8 bits (107), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 52/108 (48%), Gaps = 10/108 (9%)
Query: 271 QLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWKAEFSQKVGA 330
++ + SFP CM++L L++ +L H R L FL +GL + + ++ A
Sbjct: 218 EVTQDSFPPCMKNLLADLQKGINLPHTARFALTSFLANIGLDKDAIMDLYRM-------A 270
Query: 331 ERFDKEYA-YSIRHNYGKEGKRTDYTPYSCQKIISSTPGVGDHHGCPY 377
F ++ Y ++H G G T+YT C+ +++ +G + C Y
Sbjct: 271 PDFREDLTHYQVQHITGGSG--TEYTCPGCKTMMTYGNCIGKNKLCEY 316
>gi|448638889|ref|ZP_21676559.1| DNA primase large subunit [Haloarcula sinaiiensis ATCC 33800]
gi|445763221|gb|EMA14424.1| DNA primase large subunit [Haloarcula sinaiiensis ATCC 33800]
Length = 358
Score = 45.8 bits (107), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 48/98 (48%), Gaps = 7/98 (7%)
Query: 267 KDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWKAEFSQ 326
+++D + FP CM+ L D++++ HL+H R + FL G+G+ ++ + ++
Sbjct: 221 REIDTVVPELFPPCMKSLLDQVQKGEHLEHHSRFAIATFLVGIGMTTDEIVDLFQVNPGF 280
Query: 327 KVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQKIIS 364
A R Y + H G + T+Y+ +C + S
Sbjct: 281 GEEATR------YQVDHIRG-DTSPTEYSTPACSTMQS 311
>gi|448648766|ref|ZP_21679831.1| DNA primase large subunit [Haloarcula californiae ATCC 33799]
gi|445774510|gb|EMA25526.1| DNA primase large subunit [Haloarcula californiae ATCC 33799]
Length = 358
Score = 45.8 bits (107), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 48/98 (48%), Gaps = 7/98 (7%)
Query: 267 KDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWKAEFSQ 326
+++D + FP CM+ L D++++ HL+H R + FL G+G+ ++ + ++
Sbjct: 221 REIDTVVPELFPPCMKSLLDQVQKGEHLEHHSRFAIATFLVGIGMTTDEIVDLFQVNPGF 280
Query: 327 KVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQKIIS 364
A R Y + H G + T+Y+ +C + S
Sbjct: 281 GEEATR------YQVDHIRG-DTSPTEYSTPACSTMQS 311
>gi|448628586|ref|ZP_21672355.1| DNA primase large subunit [Haloarcula vallismortis ATCC 29715]
gi|445758117|gb|EMA09442.1| DNA primase large subunit [Haloarcula vallismortis ATCC 29715]
Length = 358
Score = 45.8 bits (107), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 48/98 (48%), Gaps = 7/98 (7%)
Query: 267 KDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWKAEFSQ 326
+++D + FP CM+ L D++++ HL+H R + FL G+G+ ++ + ++
Sbjct: 221 REIDTVVPELFPPCMKSLLDQVQKGEHLEHHSRFAIATFLVGIGMTTDEIVDLFQVNPGF 280
Query: 327 KVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQKIIS 364
A R Y + H G + T+Y+ +C + S
Sbjct: 281 GEEATR------YQVDHIRG-DTSPTEYSTPACSTMQS 311
>gi|386001103|ref|YP_005919402.1| DNA primase, large subunit [Methanosaeta harundinacea 6Ac]
gi|357209159|gb|AET63779.1| DNA primase, large subunit [Methanosaeta harundinacea 6Ac]
Length = 333
Score = 45.4 bits (106), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 48/105 (45%), Gaps = 12/105 (11%)
Query: 268 DLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWKAEFSQK 327
DL ++ +FP C+R + +L H R L FL VG+ +++ + +
Sbjct: 214 DLGEVTEGAFPPCIRGFLAAVANGANLAHTARFALTTFLLAVGMNVDEVVGVFGR----- 268
Query: 328 VGAERFDKEYA-YSIRHNYGKEGKRTDYTPYSCQKIIS--STPGV 369
+ FD+E Y + H GK G T Y P SC + + + PG+
Sbjct: 269 --SPDFDEEKTRYQVEHIAGKGG--TAYKPPSCATMATYGNCPGM 309
>gi|448679958|ref|ZP_21690397.1| DNA primase large subunit [Haloarcula argentinensis DSM 12282]
gi|445769606|gb|EMA20679.1| DNA primase large subunit [Haloarcula argentinensis DSM 12282]
Length = 358
Score = 45.4 bits (106), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 48/98 (48%), Gaps = 7/98 (7%)
Query: 267 KDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWKAEFSQ 326
+++D + FP CM+ L D++++ HL+H R + FL G+G+ ++ + ++
Sbjct: 221 REIDTVVPELFPPCMKSLLDQVQKGEHLEHHSRFAIATFLVGIGMTTDEIVDLFQVNPGF 280
Query: 327 KVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQKIIS 364
A R Y + H G + T+Y+ +C + S
Sbjct: 281 GEEATR------YQVDHIRG-DTSPTEYSTPACSTMQS 311
>gi|440292108|gb|ELP85350.1| hypothetical protein EIN_086020 [Entamoeba invadens IP1]
Length = 410
Score = 45.4 bits (106), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 46/102 (45%), Gaps = 5/102 (4%)
Query: 278 PLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWKAEFSQKVGAERFDKEY 337
P C+ + ++ ++ R Q+G+F GL + + F +S E+ KE
Sbjct: 234 PPCIYKIIRHMKIQDNIMFDARHQMGVFFYHTGLPLSCWIRFL---YSHPAMVEKIKKES 290
Query: 338 A--YSIRHNYGKEGKRTDYTPYSCQKIISSTPGVGDHHGCPY 377
A Y R+ YG +G + +SC + + + +HGCP+
Sbjct: 291 AIEYYFRYCYGTKGMKIIEPAWSCCQTMQVQSQMNHYHGCPF 332
>gi|448401293|ref|ZP_21571529.1| DNA primase large subunit [Haloterrigena limicola JCM 13563]
gi|445666556|gb|ELZ19215.1| DNA primase large subunit [Haloterrigena limicola JCM 13563]
Length = 359
Score = 45.4 bits (106), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 36/185 (19%), Positives = 74/185 (40%), Gaps = 26/185 (14%)
Query: 192 IHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEALSMSYL 251
+ G + ++++L+ RS + L + +T E + + ++ AL ++
Sbjct: 165 LDGGEVPIDEDELLALLREAIRSRIEDGLPFEVPETIATALEDDVAEIREVLAALDLT-- 222
Query: 252 GPDYSQTKEFGEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGL 311
+D+D + FP CM+ L D++++ HL H R + FL +G+
Sbjct: 223 ---------------QDIDTVVPDLFPPCMKALLDQVQKGEHLSHHSRFAITAFLTSIGM 267
Query: 312 RMEDALAFWKAEFSQKVGAERFDKEYA-YSIRHNYGKEGKRTDYTPYSCQKIISSTPGVG 370
++ + ++ S F +E Y H G + T+Y+ +C + S V
Sbjct: 268 STDEIVDLYRVNSS-------FGEEMTRYQTDHIRG-DSSPTEYSAPACSTMQSYGDCVN 319
Query: 371 DHHGC 375
C
Sbjct: 320 KDDLC 324
>gi|448683317|ref|ZP_21692206.1| DNA primase large subunit [Haloarcula japonica DSM 6131]
gi|445783990|gb|EMA34812.1| DNA primase large subunit [Haloarcula japonica DSM 6131]
Length = 358
Score = 45.4 bits (106), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 48/98 (48%), Gaps = 7/98 (7%)
Query: 267 KDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWKAEFSQ 326
+++D + FP CM+ L D++++ HL+H R + FL G+G+ ++ + ++
Sbjct: 221 REIDTVVPELFPPCMKSLLDQVQKGEHLEHHSRFAIATFLVGIGMTTDEIVDLFQVNPGF 280
Query: 327 KVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQKIIS 364
A R Y + H G + T+Y+ +C + S
Sbjct: 281 GEEATR------YQVDHIRG-DTSPTEYSTPACSTMQS 311
>gi|257052724|ref|YP_003130557.1| DNA primase large subunit [Halorhabdus utahensis DSM 12940]
gi|256691487|gb|ACV11824.1| DNA primase, large subunit [Halorhabdus utahensis DSM 12940]
Length = 361
Score = 45.4 bits (106), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 58/126 (46%), Gaps = 14/126 (11%)
Query: 241 PIVEALSMSYLGPDYSQTKE-FGEISI-KDLDQLARSSFPLCMRHLFDKLREDHHLKHGG 298
PI +AL+ D + +E E+ + +++D + FP CM L D++++ HL H
Sbjct: 204 PIADALA-----EDVAAVEERLDELDLTREIDTVVPELFPPCMTALLDQVQKGEHLPHHS 258
Query: 299 RMQLGLFLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTDYTPYS 358
R + FL +G+ +D + + E + G E Y H G T+Y+P S
Sbjct: 259 RFAITSFLASIGMATDDIVDLY--EVNPGFGEEM----TRYQTDHIRGDTSP-TEYSPPS 311
Query: 359 CQKIIS 364
C + S
Sbjct: 312 CATMQS 317
>gi|20094830|ref|NP_614677.1| DNA primase large subunit [Methanopyrus kandleri AV19]
gi|34395794|sp|Q8TVJ5.1|PRIL_METKA RecName: Full=Probable DNA primase large subunit
gi|19888048|gb|AAM02607.1| Eukaryotic-type DNA primase, large subunit [Methanopyrus kandleri
AV19]
Length = 406
Score = 45.4 bits (106), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 47/98 (47%), Gaps = 8/98 (8%)
Query: 266 IKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWKAEFS 325
++ +++ A FP C+R L + +E +L H R L FL VG ++ + FS
Sbjct: 288 LERVEKGAGGRFPPCIRELLRRAQEGENLPHEARFALAAFLVNVGWDVDRVVEV----FS 343
Query: 326 QKVGAERFDKEYA-YSIRHNYGKEGKRTDYTPYSCQKI 362
FD+E Y +RH G+ G T Y P +C K+
Sbjct: 344 N---LPDFDEERTQYQVRHIAGEVGGGTRYLPPNCDKM 378
>gi|448664142|ref|ZP_21683945.1| DNA primase large subunit [Haloarcula amylolytica JCM 13557]
gi|445774787|gb|EMA25801.1| DNA primase large subunit [Haloarcula amylolytica JCM 13557]
Length = 358
Score = 45.4 bits (106), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 48/98 (48%), Gaps = 7/98 (7%)
Query: 267 KDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWKAEFSQ 326
+++D + FP CM+ L D++++ HL+H R + FL G+G+ ++ + ++
Sbjct: 221 REIDTVVPELFPPCMKSLLDQVQKGEHLEHHSRFAIATFLIGIGMTTDEIVDLFQVNPGF 280
Query: 327 KVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQKIIS 364
A R Y + H G + T+Y+ +C + S
Sbjct: 281 GEEATR------YQVDHIRG-DTSPTEYSTPACSTMQS 311
>gi|397780319|ref|YP_006544792.1| DNA primase large subunit [Methanoculleus bourgensis MS2]
gi|396938821|emb|CCJ36076.1| DNA primase large subunit [Methanoculleus bourgensis MS2]
Length = 332
Score = 45.4 bits (106), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 51/124 (41%), Gaps = 21/124 (16%)
Query: 237 DRLTPIVEALSMSYLGPDYSQTKEFGEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKH 296
+RL P+ +S +Y ++FGEI +FP C+ L + +L H
Sbjct: 192 ERLEPVTREISAAY---QQQALEQFGEIR--------EEAFPPCISALIQAITTGANLTH 240
Query: 297 GGRMQLGLFLKGVGLRMEDALAFWKAEFSQKVGAERFDKEYA-YSIRHNYGKEGKRTDYT 355
GR + FL VG+ + + A FD E Y + H G G T+YT
Sbjct: 241 MGRFAITSFLHTVGMSITGIAEIFAR-------APDFDLEKTMYQVEHISGGGG--TEYT 291
Query: 356 PYSC 359
P SC
Sbjct: 292 PPSC 295
>gi|448302207|ref|ZP_21492190.1| DNA primase large subunit [Natronorubrum tibetense GA33]
gi|445581866|gb|ELY36214.1| DNA primase large subunit [Natronorubrum tibetense GA33]
Length = 360
Score = 45.1 bits (105), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 49/110 (44%), Gaps = 9/110 (8%)
Query: 267 KDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWKAEFSQ 326
+++D + FP CM+ L D++++ HL H R + FL +G+ ++ + ++ S
Sbjct: 221 REIDTVVPDLFPPCMKALLDQIQKGEHLPHHSRFAITAFLANIGMTTDEIVDLYRVNSS- 279
Query: 327 KVGAERFDKEYA-YSIRHNYGKEGKRTDYTPYSCQKIISSTPGVGDHHGC 375
F +E Y H G + T+Y+ SC + S V C
Sbjct: 280 ------FGEEMTRYQTDHIRG-DSSPTEYSAPSCATMQSYGDCVNKDDLC 322
>gi|145592114|ref|YP_001154116.1| DNA primase large subunit [Pyrobaculum arsenaticum DSM 13514]
gi|145283882|gb|ABP51464.1| DNA primase large subunit [Pyrobaculum arsenaticum DSM 13514]
Length = 349
Score = 45.1 bits (105), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 51/109 (46%), Gaps = 10/109 (9%)
Query: 258 TKEFGEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRMEDAL 317
K++G+ ++ + P CMR L D L+ +L H GR + +L G +E +
Sbjct: 221 VKQYGQRPVRVEARAMPGPDPPCMRALIDALKAGENLPHTGRFAITTYLLHRGWDVEQIV 280
Query: 318 AFWK--AEFSQKVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQKIIS 364
++ +F++K+ Y ++H G+ G R Y+ SC+ + S
Sbjct: 281 DLFRNAPDFNEKIT--------RYQVQHIAGQAGGRKQYSVPSCETMNS 321
>gi|448475568|ref|ZP_21603149.1| DNA primase, large subunit [Halorubrum aidingense JCM 13560]
gi|445816328|gb|EMA66232.1| DNA primase, large subunit [Halorubrum aidingense JCM 13560]
Length = 385
Score = 45.1 bits (105), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 43/94 (45%), Gaps = 9/94 (9%)
Query: 269 LDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWKAEFSQKV 328
+D +A FP CM +L +K D L L FL G+G+ ++ +AF A+ S
Sbjct: 252 IDVVAPDLFPPCMTNLIEKAERDVDLTPPESFALMAFLVGIGMTPDEVVAFC-ADTSLDA 310
Query: 329 GAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQKI 362
R+ EY K+ + T Y P +CQ +
Sbjct: 311 EGIRYQTEYL--------KDDRGTQYPPPTCQTL 336
>gi|379003173|ref|YP_005258845.1| DNA primase, large subunit [Pyrobaculum oguniense TE7]
gi|375158626|gb|AFA38238.1| Eukaryotic-type DNA primase, large subunit [Pyrobaculum oguniense
TE7]
Length = 349
Score = 45.1 bits (105), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 51/109 (46%), Gaps = 10/109 (9%)
Query: 258 TKEFGEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRMEDAL 317
K++G+ ++ + P CMR L D L+ +L H GR + +L G +E +
Sbjct: 221 VKQYGQRPVRVEARAMPGPDPPCMRALIDALKAGENLPHTGRFAITTYLLHRGWDVEQIV 280
Query: 318 AFWK--AEFSQKVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQKIIS 364
++ +F++K+ Y ++H G+ G R Y+ SC+ + S
Sbjct: 281 DLFRNAPDFNEKIT--------RYQVQHIAGQAGGRKQYSVPSCETMNS 321
>gi|298675053|ref|YP_003726803.1| DNA primase large subunit [Methanohalobium evestigatum Z-7303]
gi|298288041|gb|ADI74007.1| DNA primase, large subunit [Methanohalobium evestigatum Z-7303]
Length = 349
Score = 44.7 bits (104), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 51/114 (44%), Gaps = 10/114 (8%)
Query: 263 EISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWKA 322
+++I ++ ++ SFP C+ + + +L H R L FL VG+ +++ + +
Sbjct: 215 DVNIDEMGEVDTESFPPCISNAISGVSTGANLGHSMRFALTSFLLNVGMSVDEIVDMFNV 274
Query: 323 EFSQKVGAERFDKEYA-YSIRHNYGKEGKRTDYTPYSCQKIISSTPGVGDHHGC 375
+ FD+E Y I H G G + YTP SCQ + + G C
Sbjct: 275 -------SPDFDEEKTRYQIEHIAGSSG--SPYTPPSCQTMKTYGNCYGGDEFC 319
>gi|52549123|gb|AAU82972.1| conserved hypothetical protein [uncultured archaeon GZfos24D9]
Length = 349
Score = 44.7 bits (104), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 46/102 (45%), Gaps = 9/102 (8%)
Query: 275 SSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWKAEFSQKVGAERFD 334
+ FP C+ ++ L+E ++ HG R + FL +GL ++ + +K + FD
Sbjct: 231 NCFPPCISYILSNLKEGINVTHGARFAVTAFLLNLGLSEDEIIEIYK-------NSPDFD 283
Query: 335 KEYA-YSIRHNYGKEGKRTDYTPYSCQKIISSTPGVGDHHGC 375
+E Y +RH G G YT SC + + VG C
Sbjct: 284 EERTRYQVRHIAGGTGS-VRYTAPSCATMRTYGNCVGSDDIC 324
>gi|20089008|ref|NP_615083.1| DNA primase large subunit [Methanosarcina acetivorans C2A]
gi|34395793|sp|Q8TUF8.1|PRIL_METAC RecName: Full=Probable DNA primase large subunit
gi|19913862|gb|AAM03563.1| conserved hypothetical protein [Methanosarcina acetivorans C2A]
Length = 371
Score = 44.7 bits (104), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 70/176 (39%), Gaps = 23/176 (13%)
Query: 211 QFRSNLSKALILTNRKWTSTIREQERDRL-----TPIVEALSMSYLGPDYSQTKEFGEIS 265
QFR+ K +T ++ + E R+R+ P + ++ P ++ KE E+
Sbjct: 154 QFRAGKIK---ITKEEFARLLEEAVRERIEQSFPIPEIPPEVSAFCAPYVAEIKEQFEVQ 210
Query: 266 IK-----DLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFW 320
K D + FP C+ H ++ +L H R + FL VG+ +E+ L +
Sbjct: 211 KKKFGATDFGAVEPELFPPCISHALANVQGGVNLAHSMRFAMTSFLLNVGMSVEEILNLF 270
Query: 321 KAEFSQKVGAERFDKEYA-YSIRHNYGKEGKRTDYTPYSCQKIISSTPGVGDHHGC 375
+ FD E Y I H G G +Y P +C + + +G C
Sbjct: 271 NV-------SPDFDAEKTLYQIEHIAGATG--NEYKPPACDTMRTYGNCIGKDGLC 317
>gi|167044440|gb|ABZ09116.1| putative eukaryotic-type DNA primase, large subunit [uncultured
marine crenarchaeote HF4000_APKG6D9]
Length = 342
Score = 44.7 bits (104), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 43/199 (21%), Positives = 76/199 (38%), Gaps = 32/199 (16%)
Query: 166 LPTADAIFYKVPFEEVPELVAGRRVYIHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNR 225
+P +D I + V F E + R ++ G ++ + V L+ + S +S +I
Sbjct: 148 MPVSDYIKHSVTFHEREWKLINR--HVEDGKVFLTPDKTVRLIRKELGSYISSKIINAPI 205
Query: 226 KWTSTIREQERDRLTPIVEALSMSYLGPDYSQTKEFGEISIKDLDQLARSSFPLCMRHLF 285
E + L I + L+ SY + P C++H
Sbjct: 206 PPMIPGFENYVNELVSICKKLTPSY--------------------TITTGEHPPCIKHAI 245
Query: 286 DKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWK--AEFSQKVGAERFDKEYAYSIRH 343
+ L + +L H GR L FL G +E +K +++++V Y + H
Sbjct: 246 EVLEKGENLPHSGRFMLAAFLLSKGQSVEQIAPLFKNAPDYNERVT--------LYQLNH 297
Query: 344 NYGKEGKRTDYTPYSCQKI 362
G G T Y+ SC+K+
Sbjct: 298 LAGLSGSGTQYSCPSCEKL 316
>gi|40217448|emb|CAE46381.1| conserved hypothetical protein [uncultured archaeon]
gi|268323831|emb|CBH37419.1| Probable DNA primase, large subunit [uncultured archaeon]
Length = 349
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 46/102 (45%), Gaps = 9/102 (8%)
Query: 275 SSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWKAEFSQKVGAERFD 334
+ FP C+ ++ L+E ++ HG R + FL +GL ++ + +K + FD
Sbjct: 231 NCFPPCISYILSNLKEGINVTHGARFAVTAFLLNLGLSEDEIIEIYK-------NSPDFD 283
Query: 335 KEYA-YSIRHNYGKEGKRTDYTPYSCQKIISSTPGVGDHHGC 375
+E Y +RH G G YT SC + + +G C
Sbjct: 284 EERTRYQVRHIAGGTGS-VRYTAPSCATMRTYGNCIGSDDIC 324
>gi|374325968|ref|YP_005084168.1| DNA primase large subunit [Pyrobaculum sp. 1860]
gi|356641237|gb|AET31916.1| DNA primase large subunit [Pyrobaculum sp. 1860]
Length = 321
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 49/108 (45%), Gaps = 10/108 (9%)
Query: 259 KEFGEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALA 318
K++ +K Q A P CM+ + D L+ +L H R + +L G +E +
Sbjct: 194 KKYAHKPLKAPSQPAEGPHPPCMKAILDALKSGDNLPHTARFAIATYLLHRGWDVEQIVD 253
Query: 319 FWKA--EFSQKVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQKIIS 364
++ +F++K+ Y ++H G+ G R +Y SC+ + S
Sbjct: 254 LFRTSPDFNEKI--------TRYQVQHIAGQVGGRKEYAVPSCETMNS 293
>gi|448738267|ref|ZP_21720295.1| DNA primase large subunit [Halococcus thailandensis JCM 13552]
gi|445801967|gb|EMA52281.1| DNA primase large subunit [Halococcus thailandensis JCM 13552]
Length = 357
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 45/99 (45%), Gaps = 9/99 (9%)
Query: 267 KDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWKAEFSQ 326
+++D + FP CM+ L D +++ HL H R + FL +G+ ++ + +
Sbjct: 219 REIDTVVPDRFPPCMKALLDSVQKGEHLPHHSRFAITSFLASIGMSTDEIIDLYMVNPG- 277
Query: 327 KVGAERFDKEYA-YSIRHNYGKEGKRTDYTPYSCQKIIS 364
F +E Y H G E T+Y+P SC + S
Sbjct: 278 ------FGEEMTRYQTDHIRG-ETSPTEYSPPSCATMQS 309
>gi|448307977|ref|ZP_21497861.1| DNA primase large subunit [Natronorubrum bangense JCM 10635]
gi|445594788|gb|ELY48930.1| DNA primase large subunit [Natronorubrum bangense JCM 10635]
Length = 360
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 48/110 (43%), Gaps = 9/110 (8%)
Query: 267 KDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWKAEFSQ 326
+++D + FP CM+ L D +++ HL H R + FL +G+ ++ + ++ S
Sbjct: 221 REIDTVVPELFPPCMKALLDGIQKGEHLPHHSRFAITAFLSNIGMETDEIVDLYRVNSS- 279
Query: 327 KVGAERFDKEYA-YSIRHNYGKEGKRTDYTPYSCQKIISSTPGVGDHHGC 375
F +E Y H G + T+Y+ SC + S V C
Sbjct: 280 ------FGEEMTRYQTDHIRG-DSSPTEYSAPSCATMQSYGDCVNKDDLC 322
>gi|340343930|ref|ZP_08667062.1| Putative eukaryotic-type DNA primase, large subunit [Candidatus
Nitrosoarchaeum koreensis MY1]
gi|339519071|gb|EGP92794.1| Putative eukaryotic-type DNA primase, large subunit [Candidatus
Nitrosoarchaeum koreensis MY1]
Length = 342
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 42/88 (47%), Gaps = 10/88 (11%)
Query: 277 FPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWK--AEFSQKVGAERFD 334
+P C++H + L + +L H GR L FL G +E+ +K +++Q++
Sbjct: 237 YPPCIKHAIEVLEKGENLPHSGRFMLATFLLSKGQSVEEIAPLFKNAPDYNQRIT----- 291
Query: 335 KEYAYSIRHNYGKEGKRTDYTPYSCQKI 362
Y + H G G T Y+ SC+K+
Sbjct: 292 ---LYQLNHLAGTSGSGTHYSCPSCEKL 316
>gi|282164989|ref|YP_003357374.1| probable DNA primase large subunit [Methanocella paludicola SANAE]
gi|282157303|dbj|BAI62391.1| probable DNA primase large subunit [Methanocella paludicola SANAE]
Length = 349
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 70/161 (43%), Gaps = 30/161 (18%)
Query: 230 TIREQERDRLTPIVEALSMSYLGPDYSQTKEFGEISIKDLDQL------------ARSSF 277
+RE+ + ++P+ L+ + K +G+ + +L++L +R +F
Sbjct: 172 AVREKIQSSVSPVPAPLA--------APLKPYGDEILIELNRLKSKMNISLGGDVSRDAF 223
Query: 278 PLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWKAEFSQKVGAERFDKEY 337
P CM++L +L++ +L H R L FL +G + + ++ A F ++
Sbjct: 224 PPCMKYLLSELQKGVNLPHTARFALTSFLANIGYDKDKIMELYRM-------APDFREDL 276
Query: 338 A-YSIRHNYGKEGKRTDYTPYSCQKIISSTPGVGDHHGCPY 377
Y + H G G T+YT SC+ + + G C Y
Sbjct: 277 TRYQVEHITGGGG--TEYTSPSCKTMTTYGNCFGRDKLCDY 315
>gi|448303973|ref|ZP_21493919.1| DNA primase large subunit [Natronorubrum sulfidifaciens JCM 14089]
gi|445592600|gb|ELY46787.1| DNA primase large subunit [Natronorubrum sulfidifaciens JCM 14089]
Length = 359
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 48/110 (43%), Gaps = 9/110 (8%)
Query: 267 KDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWKAEFSQ 326
+++D + FP CM+ L D +++ HL H R + FL +G+ ++ + ++ S
Sbjct: 221 REIDTVVPDLFPPCMKALLDDIQKGEHLPHHSRFAITAFLSNIGMSTDEIVDLYRINSS- 279
Query: 327 KVGAERFDKEYA-YSIRHNYGKEGKRTDYTPYSCQKIISSTPGVGDHHGC 375
F +E Y H G + T+Y+ SC + S V C
Sbjct: 280 ------FGEEMTRYQTDHIRG-DSSPTEYSAPSCATMQSYGDCVNKDDLC 322
>gi|88602764|ref|YP_502942.1| DNA primase large subunit [Methanospirillum hungatei JF-1]
gi|88188226|gb|ABD41223.1| DNA primase large subunit [Methanospirillum hungatei JF-1]
Length = 384
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/104 (22%), Positives = 46/104 (44%), Gaps = 8/104 (7%)
Query: 260 EFGEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAF 319
E+ + ++++ Q+ S+FP CM+ + + HL H R + FL +G+ +
Sbjct: 209 EWQKRALEEFGQVEESAFPPCMQAILGAIAGQGHLTHMARFAISAFLHNIGMENTRIIEL 268
Query: 320 WKAEFSQKVGAERFD-KEYAYSIRHNYGKEGKRTDYTPYSCQKI 362
+ + FD ++ Y + H G+ G T+Y C +
Sbjct: 269 YGS-------VPNFDLRKTLYQVEHITGRGGTSTEYVSPLCSTM 305
>gi|448460252|ref|ZP_21597077.1| DNA primase, large subunit [Halorubrum lipolyticum DSM 21995]
gi|445806993|gb|EMA57079.1| DNA primase, large subunit [Halorubrum lipolyticum DSM 21995]
Length = 409
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 42/94 (44%), Gaps = 9/94 (9%)
Query: 269 LDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWKAEFSQKV 328
+D +A FP CMR+L DK L L FL G+G+ ++ +AF A+ S
Sbjct: 262 VDVVAPDLFPPCMRNLIDKAERGTDLSPPESFALMAFLVGIGMSPDEVVAFC-ADTSLDA 320
Query: 329 GAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQKI 362
R+ EY + + T Y P +C+ +
Sbjct: 321 EGIRYQTEYL--------SDDRGTQYPPPTCETL 346
>gi|410671534|ref|YP_006923905.1| DNA primase large subunit [Methanolobus psychrophilus R15]
gi|409170662|gb|AFV24537.1| DNA primase large subunit [Methanolobus psychrophilus R15]
Length = 355
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 40/87 (45%), Gaps = 10/87 (11%)
Query: 277 FPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWKAEFSQKVGAERFDKE 336
FP C+ H + + +L H R + FL G+G+ ++D + + + + FD E
Sbjct: 228 FPPCITHAISQSQAGVNLAHSMRFAMTSFLLGIGMSVDDIMNLF-------ISSPDFDVE 280
Query: 337 YA-YSIRHNYGKEGKRTDYTPYSCQKI 362
A Y + H G G T Y P SC +
Sbjct: 281 KARYQVEHIAGSSG--TSYKPPSCATM 305
>gi|327401268|ref|YP_004342107.1| DNA primase large subunit [Archaeoglobus veneficus SNP6]
gi|327316776|gb|AEA47392.1| DNA primase large subunit [Archaeoglobus veneficus SNP6]
Length = 396
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 25/101 (24%), Positives = 47/101 (46%), Gaps = 16/101 (15%)
Query: 260 EFGEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAF 319
E GE+ + S FP CM+ + L+ ++ H R + F+ +GL +++ ++
Sbjct: 265 ELGEVDV--------SCFPPCMKKILSDLQSGVNVPHTARFAITSFMLNIGLSVDEIISL 316
Query: 320 WKAEFSQKVGAERFDKEYA-YSIRHNYGKEGKRTDYTPYSC 359
+ + A FD+E Y + H G G+ T+Y +C
Sbjct: 317 FSS-------APDFDEEKTRYQVEHIAGARGRGTEYDCPAC 350
>gi|408404224|ref|YP_006862207.1| DNA primase, large subunit [Candidatus Nitrososphaera gargensis
Ga9.2]
gi|408364820|gb|AFU58550.1| DNA primase, large subunit [Candidatus Nitrososphaera gargensis
Ga9.2]
Length = 348
Score = 43.1 bits (100), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 21/92 (22%), Positives = 46/92 (50%), Gaps = 10/92 (10%)
Query: 273 ARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWK--AEFSQKVGA 330
A + +P C++H + + +L H R+ L ++ +G +++ + ++ +F++K+
Sbjct: 238 AVTDYPPCVKHALEVMGRGENLPHSARVMLATYMLAIGKPVDEIVMMYENAPDFNEKIT- 296
Query: 331 ERFDKEYAYSIRHNYGKEGKRTDYTPYSCQKI 362
Y + H G +G RT Y+ SC K+
Sbjct: 297 -------RYQVEHLAGMKGSRTKYSVPSCDKL 321
>gi|307353430|ref|YP_003894481.1| DNA primase large subunit [Methanoplanus petrolearius DSM 11571]
gi|307156663|gb|ADN36043.1| DNA primase, large subunit [Methanoplanus petrolearius DSM 11571]
Length = 347
Score = 43.1 bits (100), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 45/100 (45%), Gaps = 10/100 (10%)
Query: 261 FGEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFW 320
+ E+ ++ ++ SFP CM+ + + + E ++ H R L F+ +G+ + +
Sbjct: 203 YQEMLLEQFGEVDEDSFPPCMKAIINAVTEGTNIPHTARFSLTAFMHVIGMDSTQIVEVY 262
Query: 321 KAEFSQKVGAERFDKEYA-YSIRHNYGKEGKRTDYTPYSC 359
A FD E Y + H G G T+YTP SC
Sbjct: 263 -------TRAPDFDVEKTMYQVEHISGSGG--TEYTPPSC 293
>gi|52550026|gb|AAU83875.1| conserved hypothetical protein [uncultured archaeon GZfos34H10]
Length = 343
Score = 42.7 bits (99), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 44/102 (43%), Gaps = 9/102 (8%)
Query: 275 SSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWKAEFSQKVGAERFD 334
+ FP C+ ++ L+ ++ HG R + FL +GL E+ + +K + FD
Sbjct: 231 NCFPPCISYILSNLKAGINVTHGARFAVTAFLLNLGLSEEEIIEIYK-------NSPDFD 283
Query: 335 KEYA-YSIRHNYGKEGKRTDYTPYSCQKIISSTPGVGDHHGC 375
E Y +RH G G YT SC + + VG C
Sbjct: 284 VERTRYQVRHIAGGTGS-VRYTAPSCATMRTYGNCVGSDDIC 324
>gi|448433370|ref|ZP_21585891.1| DNA primase, large subunit [Halorubrum tebenquichense DSM 14210]
gi|445686383|gb|ELZ38707.1| DNA primase, large subunit [Halorubrum tebenquichense DSM 14210]
Length = 390
Score = 42.7 bits (99), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 41/93 (44%), Gaps = 9/93 (9%)
Query: 270 DQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWKAEFSQKVG 329
D + R FP CM +L +K D L L FL G+G+ ++ +AF A+ S
Sbjct: 259 DVIDRDLFPPCMTNLIEKAERDTKLSSAESFALMAFLVGIGMTPDEVVAFC-ADTSLDAE 317
Query: 330 AERFDKEYAYSIRHNYGKEGKRTDYTPYSCQKI 362
R+ EY + + T Y P +C+ +
Sbjct: 318 GIRYQTEYL--------TDDRGTQYPPPTCETL 342
>gi|12082669|gb|AAG48573.1|AF253047_1 DNA primase large subunit Pri2p [Candida albicans]
Length = 126
Score = 42.7 bits (99), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 30/51 (58%)
Query: 18 VSTLPLYRYAPQLEVRLEDFEVFAMDRLRVLKGISDALARGKRPEEMENLV 68
S L Y P E+ LE+FE +A+DRL++L I LAR K +E+E +
Sbjct: 48 ASRLSFYDLPPTQEITLEEFETWAIDRLKILIEIESCLARSKTLKEIETSI 98
>gi|13541388|ref|NP_111076.1| DNA primase large subunit [Thermoplasma volcanium GSS1]
gi|34395817|sp|Q97BA1.1|PRIL_THEVO RecName: Full=Probable DNA primase large subunit
gi|14324771|dbj|BAB59698.1| hypothetical protein [Thermoplasma volcanium GSS1]
Length = 327
Score = 42.7 bits (99), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 37/175 (21%), Positives = 75/175 (42%), Gaps = 22/175 (12%)
Query: 192 IHKGHAYVAMHQVVSLVVTQFRSNLSKALILTNRKWTSTIREQERDRLTPIVEALSMSYL 251
+ KG Y + ++ F SN+ K + ++ S + + D + + E
Sbjct: 143 VIKGIVYCQKDVAIKILRESFVSNMFKVIDSIDQTTASPVLSDQTDSINELRE------- 195
Query: 252 GPDYSQTKEFGEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGL 311
+ + + +++I + A FP CM+ + L E ++ H GR+ + FL VG
Sbjct: 196 ---FYKKSVYAKLTIGRGNTKA---FPPCMKEIIRNLHEGINVPHMGRLAIASFLHKVGY 249
Query: 312 RMEDALAFWKAEFSQKVGAERFDKEYA-YSIRHNYGKEGKRTDYTPYSCQKIISS 365
++ + +++ A FD+ Y I+H G E +Y+P C+ + S+
Sbjct: 250 TEDEIVEYFR-------NAPDFDESITRYQIKHLSG-EISGVEYSPPKCETMRSN 296
>gi|284162356|ref|YP_003400979.1| DNA primase, large subunit [Archaeoglobus profundus DSM 5631]
gi|284012353|gb|ADB58306.1| DNA primase, large subunit [Archaeoglobus profundus DSM 5631]
Length = 371
Score = 42.7 bits (99), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 51/124 (41%), Gaps = 11/124 (8%)
Query: 276 SFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWKAEFSQKVGAERFDK 335
FP CM+ + L E ++ H GR + FL +G ++ + ++ A FD+
Sbjct: 247 CFPECMKKIIADLNEGKNVPHTGRFAIASFLINLGCSVDKVVEIFR-------NAPDFDE 299
Query: 336 EYA-YSIRHNYGKEGKRTDYTPYSCQKIISSTPGVGDHHGCPYRHFSEENLRAALGRMGV 394
+ Y + H G GK Y SC+ + S + + C H + R R G
Sbjct: 300 DKTRYQVEHIAGMRGKGEKYIAPSCETMKSWGLCIWN---CEIDHPIKYYRRCLSERRGG 356
Query: 395 GSRA 398
G RA
Sbjct: 357 GKRA 360
>gi|448463147|ref|ZP_21597925.1| DNA primase, large subunit [Halorubrum kocurii JCM 14978]
gi|445817142|gb|EMA67018.1| DNA primase, large subunit [Halorubrum kocurii JCM 14978]
Length = 388
Score = 42.7 bits (99), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 42/94 (44%), Gaps = 9/94 (9%)
Query: 269 LDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWKAEFSQKV 328
+D +A FP CMR+L DK L L FL G+G+ ++ +AF A+ S
Sbjct: 255 VDVVAPELFPPCMRNLIDKADRGTDLSPPESFALMAFLVGIGMTPDEVVAFC-ADTSLDA 313
Query: 329 GAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQKI 362
R+ EY + + T Y P +C+ +
Sbjct: 314 EGIRYQTEYL--------SDDRGTQYPPPTCETL 339
>gi|16082072|ref|NP_394498.1| DNA primase large subunit [Thermoplasma acidophilum DSM 1728]
gi|34395827|sp|Q9HJD1.1|PRIL_THEAC RecName: Full=Probable DNA primase large subunit
gi|10640353|emb|CAC12167.1| conserved hypothetical protein [Thermoplasma acidophilum]
Length = 340
Score = 42.4 bits (98), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 44/92 (47%), Gaps = 9/92 (9%)
Query: 275 SSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWKAEFSQKVGAERFD 334
S FP CM+ + L ++ H GR+ L FL G ++ + +++ A FD
Sbjct: 224 SMFPPCMKEIIKNLESGVNVSHMGRLALASFLHKAGYSEDEIVPYFR-------NAPDFD 276
Query: 335 KEYA-YSIRHNYGKEGKRTDYTPYSCQKIISS 365
+ Y I+H G E T+YTP C+ + S+
Sbjct: 277 ENITRYQIKHISG-EISGTEYTPPKCETMRSN 307
>gi|124027970|ref|YP_001013290.1| hypothetical protein Hbut_1102 [Hyperthermus butylicus DSM 5456]
gi|123978664|gb|ABM80945.1| conserved archaeal protein [Hyperthermus butylicus DSM 5456]
Length = 377
Score = 42.0 bits (97), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 42/93 (45%), Gaps = 10/93 (10%)
Query: 272 LARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWK--AEFSQKVG 329
+ + P CMR L ++ R +L H R L F+ +G ++ + ++ +F++K+
Sbjct: 252 IVEEALPPCMRDLIERTRRGDNLSHHERFALATFMLNIGAEIDYVVDLFRNMPDFNEKIT 311
Query: 330 AERFDKEYAYSIRHNYGKEGKRTDYTPYSCQKI 362
Y + H G G Y YSC+K+
Sbjct: 312 --------RYQVEHLAGLRGSGKKYRVYSCEKM 336
>gi|448312401|ref|ZP_21502147.1| DNA primase large subunit [Natronolimnobius innermongolicus JCM
12255]
gi|445601786|gb|ELY55769.1| DNA primase large subunit [Natronolimnobius innermongolicus JCM
12255]
Length = 364
Score = 41.6 bits (96), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 22/98 (22%), Positives = 46/98 (46%), Gaps = 7/98 (7%)
Query: 267 KDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLRMEDALAFWKAEFSQ 326
+++D + FP CM+ L D +++ HL H R + FL +G+ ++ + ++ +
Sbjct: 221 REIDTVVPDLFPPCMKALLDDIQKGEHLPHHSRFAITAFLANIGMSTDEIVDLYRVNSTF 280
Query: 327 KVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQKIIS 364
R+ ++ IR + T+Y+ SC + S
Sbjct: 281 GEDMTRYQTDH---IRGDTSP----TEYSTPSCATMQS 311
>gi|406575464|ref|ZP_11051168.1| pyruvate kinase [Janibacter hoylei PVAS-1]
gi|404555176|gb|EKA60674.1| pyruvate kinase [Janibacter hoylei PVAS-1]
Length = 526
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 56/123 (45%), Gaps = 5/123 (4%)
Query: 101 RTEDLRKWFLSMETALYRYRFLLGSSEAKRA--LMEEFDLPCKAISRTEFENAKEKLEQV 158
+ ED +W L + F+ S++ R +M+E + I++ E A E LE++
Sbjct: 144 KDEDDLRWALGLRADYIALSFVRSSADITRVHEIMDEVGVRLPVIAKIEKPQAVEALEEI 203
Query: 159 ARSFDQPLPTADAIFYKVPFEEVPELVAGRRVYI--HKGHAYVAMHQVVSLVVTQFRSNL 216
+FD + + ++P E+VP LV R V + K + QV+ ++ R
Sbjct: 204 IDAFDGIMVARGDLGVELPLEQVP-LVQKRAVELCRQKAKPVIVATQVLESMIDNSRPTR 262
Query: 217 SKA 219
++A
Sbjct: 263 AEA 265
>gi|352682765|ref|YP_004893289.1| putative DNA primase large subunit [Thermoproteus tenax Kra 1]
gi|350275564|emb|CCC82211.1| putative DNA primase large subunit [Thermoproteus tenax Kra 1]
Length = 343
Score = 40.0 bits (92), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 25/119 (21%), Positives = 54/119 (45%), Gaps = 10/119 (8%)
Query: 248 MSYLGPDYSQTKEFGEISIKDLDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLK 307
+S + P Y + + + + R P CMR + + +R+ + H R + +L
Sbjct: 201 LSKVEPIYREIAKLRSLRPVTIRAEGRGEDPPCMRAIIESIRKGENAPHTARFAITTYLL 260
Query: 308 GVGLRMEDALAFWKA--EFSQKVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQKIIS 364
G +E + +++ +F++K+ Y ++H G+ G R +Y+ SC+ + S
Sbjct: 261 RRGWDVEQIVDLFRSSPDFNEKIT--------RYQVQHIAGQVGGRKEYSVPSCETMNS 311
>gi|30724884|dbj|BAC76684.1| pyruvate kinase [Microbispora rosea subsp. aerata]
Length = 474
Score = 39.7 bits (91), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 56/120 (46%), Gaps = 6/120 (5%)
Query: 103 EDLRKWFLSMETALYRYRFLLGSSEAKRALMEEFDLPCKAISRTEFENAKEKLEQVARSF 162
EDLR W L + F+ RA+MEE + +++ E A E+LE++ +F
Sbjct: 175 EDLR-WALRTGFDMIALSFVRCPDALVRAIMEEEGVRLPLLAKIEKPQAVERLEEIVDTF 233
Query: 163 DQPLPTADAIFYKVPFEEVPELVAGRRVYI---HKGHAYVAMHQVVSLVVTQFRSNLSKA 219
D + + ++P E+VP + RR+ K H + Q++ +++ R ++A
Sbjct: 234 DGVMVARGDLGVELPLEQVP--IVQRRIIDLCREKAHPVIVATQMLDSMMSSPRPTRAEA 291
>gi|403235122|ref|ZP_10913708.1| beta-galactosidase [Bacillus sp. 10403023]
Length = 367
Score = 38.9 bits (89), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 77/183 (42%), Gaps = 31/183 (16%)
Query: 197 AYVAMHQVVSLVVTQFRSNLSKAL-----ILTNRKWTSTIREQERDRLTPIVEALSMSYL 251
A++ HQ V SNL +AL IL + T + +QE TPI L++S
Sbjct: 168 AFLGYHQGVH---APGHSNLEEALKAAHHILVSHGQTVNLLKQELQSTTPIGITLNLS-- 222
Query: 252 GPDYSQTKEFGE-ISIKD---------LDQLARSSFPLCMRHLFDKLREDHHLKHGGRMQ 301
P Y + F + I+ + LD + + +P M +LF K D H G M+
Sbjct: 223 -PVYPASNSFNDKIAANNADGYSNRWFLDPIFKGKYPYDMVNLFSKYVHDFSFVHDGDME 281
Query: 302 LGLFLKGVGLRME-DALAFWKAEFSQKVGAERFDKEYAYSIRHNYGKEGKRTDYTPYSCQ 360
+ + + + + ++ ++ A F ++AYS +Y K G D +P Q
Sbjct: 282 V------ISTKCDFFGINYYSRTITEFNSANDFMYKHAYS---DYEKTGMGWDVSPLEFQ 332
Query: 361 KII 363
+I
Sbjct: 333 DLI 335
>gi|406575785|ref|ZP_11051475.1| exonuclease SbcC, hypothetical [Janibacter hoylei PVAS-1]
gi|404554783|gb|EKA60295.1| exonuclease SbcC, hypothetical [Janibacter hoylei PVAS-1]
Length = 1045
Score = 38.1 bits (87), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
Query: 11 TNTPNDSVSTLPLYRYAPQLE--VRLEDFEVFAMDRLRVLKGISDALARGKRPEEMENLV 68
T++ ND L Y A +LE V L + + AM R D+ ARG+R + LV
Sbjct: 872 TSSDNDKRMRLSTYVLAARLERIVELANARLTAMADGRYELAHDDSSARGQRRGGLGLLV 931
Query: 69 RDLWKANMRHP 79
RDLW RHP
Sbjct: 932 RDLWTGQDRHP 942
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.321 0.135 0.399
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,852,438,023
Number of Sequences: 23463169
Number of extensions: 277169217
Number of successful extensions: 645838
Number of sequences better than 100.0: 587
Number of HSP's better than 100.0 without gapping: 513
Number of HSP's successfully gapped in prelim test: 74
Number of HSP's that attempted gapping in prelim test: 643074
Number of HSP's gapped (non-prelim): 650
length of query: 453
length of database: 8,064,228,071
effective HSP length: 146
effective length of query: 307
effective length of database: 8,933,572,693
effective search space: 2742606816751
effective search space used: 2742606816751
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 79 (35.0 bits)