Query 012909
Match_columns 453
No_of_seqs 301 out of 1850
Neff 7.5
Searched_HMMs 46136
Date Fri Mar 29 07:34:31 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012909.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/012909hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1393 Hydroxymethylglutaryl- 100.0 5E-100 1E-104 736.4 32.7 432 4-440 7-455 (462)
2 PLN02577 hydroxymethylglutaryl 100.0 7.4E-93 1.6E-97 733.0 39.9 444 5-451 1-458 (459)
3 TIGR01833 HMG-CoA-S_euk 3-hydr 100.0 8.6E-91 1.9E-95 716.8 38.6 432 8-439 1-454 (454)
4 COG3425 PksG 3-hydroxy-3-methy 100.0 6.1E-77 1.3E-81 588.5 29.6 361 7-438 1-376 (377)
5 TIGR01835 HMG-CoA-S_prok 3-hyd 100.0 2.2E-67 4.7E-72 538.9 34.3 363 9-436 1-379 (379)
6 PF08540 HMG_CoA_synt_C: Hydro 100.0 2.1E-62 4.6E-67 476.1 20.2 270 165-439 1-282 (282)
7 TIGR00748 HMG_CoA_syn_Arc hydr 100.0 8.4E-48 1.8E-52 389.8 29.0 322 8-397 1-340 (345)
8 PRK04262 hypothetical protein; 100.0 7E-48 1.5E-52 391.0 27.1 323 7-397 1-341 (347)
9 COG0332 FabH 3-oxoacyl-[acyl-c 100.0 2.6E-47 5.6E-52 376.7 26.0 289 7-361 2-323 (323)
10 PRK05963 3-oxoacyl-(acyl carri 100.0 2.9E-43 6.2E-48 354.1 26.3 289 8-360 3-326 (326)
11 PF01154 HMG_CoA_synt_N: Hydro 100.0 1.9E-43 4E-48 317.0 12.2 160 5-164 1-174 (174)
12 PRK12879 3-oxoacyl-(acyl carri 100.0 3.6E-41 7.8E-46 338.5 27.6 292 7-361 3-325 (325)
13 CHL00203 fabH 3-oxoacyl-acyl-c 100.0 8.9E-41 1.9E-45 336.2 28.5 290 7-361 1-326 (326)
14 PRK07204 3-oxoacyl-(acyl carri 100.0 8E-41 1.7E-45 336.8 27.6 288 7-360 3-329 (329)
15 PRK09258 3-oxoacyl-(acyl carri 100.0 3.1E-41 6.8E-46 340.9 24.5 294 5-360 2-338 (338)
16 PRK12880 3-oxoacyl-(acyl carri 100.0 1.8E-40 4E-45 336.8 27.0 289 5-362 4-340 (353)
17 TIGR00747 fabH 3-oxoacyl-(acyl 100.0 1.4E-39 3E-44 326.2 26.6 289 7-360 1-318 (318)
18 PLN02326 3-oxoacyl-[acyl-carri 100.0 2.5E-39 5.5E-44 331.9 26.5 290 7-360 46-379 (379)
19 cd00830 KAS_III Ketoacyl-acyl 100.0 2.9E-39 6.4E-44 323.5 24.9 286 8-357 1-319 (320)
20 PRK06840 hypothetical protein; 100.0 7.7E-39 1.7E-43 323.7 25.7 292 6-362 2-337 (339)
21 PRK09352 3-oxoacyl-(acyl carri 100.0 4E-38 8.6E-43 315.6 27.2 289 7-361 2-319 (319)
22 cd00831 CHS_like Chalcone and 100.0 1.3E-38 2.8E-43 324.8 20.8 292 8-358 1-361 (361)
23 PLN03169 chalcone synthase fam 100.0 6.1E-38 1.3E-42 322.2 22.3 296 5-360 18-388 (391)
24 PRK06816 3-oxoacyl-(acyl carri 100.0 1.2E-37 2.7E-42 319.3 23.9 301 7-361 1-378 (378)
25 cd00827 init_cond_enzymes "ini 100.0 4.4E-36 9.6E-41 301.0 25.3 288 8-357 1-323 (324)
26 PLN03171 chalcone synthase-lik 100.0 3.3E-35 7.1E-40 302.6 21.8 295 8-362 22-396 (399)
27 PLN03168 chalcone synthase; Pr 100.0 2.1E-34 4.5E-39 295.6 22.0 294 8-362 15-387 (389)
28 PLN03172 chalcone synthase fam 100.0 6.7E-34 1.5E-38 291.8 25.1 295 9-362 17-388 (393)
29 PLN03170 chalcone synthase; Pr 100.0 2.6E-34 5.7E-39 295.7 19.0 295 9-362 21-392 (401)
30 PRK07515 3-oxoacyl-(acyl carri 100.0 3.1E-33 6.7E-38 286.3 23.6 292 7-359 1-370 (372)
31 PLN03173 chalcone synthase; Pr 100.0 2.2E-33 4.8E-38 287.8 20.1 295 8-362 16-388 (391)
32 PLN02377 3-ketoacyl-CoA syntha 100.0 1.3E-32 2.7E-37 287.2 24.1 303 4-362 93-479 (502)
33 PLN02854 3-ketoacyl-CoA syntha 100.0 1.4E-31 3E-36 279.4 23.6 302 4-362 109-495 (521)
34 PLN02932 3-ketoacyl-CoA syntha 100.0 6.4E-32 1.4E-36 280.4 20.4 300 4-361 63-454 (478)
35 PLN02192 3-ketoacyl-CoA syntha 100.0 1E-30 2.2E-35 272.3 22.8 296 4-362 97-483 (511)
36 COG3424 BcsA Predicted naringe 100.0 3.1E-30 6.6E-35 245.9 18.4 293 10-362 3-354 (356)
37 PLN00415 3-ketoacyl-CoA syntha 100.0 8.2E-29 1.8E-33 254.4 21.2 305 4-362 55-441 (466)
38 cd00327 cond_enzymes Condensin 99.9 5.2E-24 1.1E-28 206.0 13.2 229 57-358 7-254 (254)
39 cd00825 decarbox_cond_enzymes 99.8 5.3E-20 1.1E-24 185.0 17.1 231 57-358 11-332 (332)
40 PF00195 Chal_sti_synt_N: Chal 99.8 1.1E-19 2.4E-24 171.5 11.8 143 6-153 12-192 (226)
41 PF08541 ACP_syn_III_C: 3-Oxoa 99.6 8.5E-17 1.8E-21 131.5 3.8 89 222-360 2-90 (90)
42 PF08392 FAE1_CUT1_RppA: FAE1/ 99.6 2.6E-15 5.5E-20 145.7 13.2 156 3-164 3-208 (290)
43 PRK06147 3-oxoacyl-(acyl carri 99.6 1.3E-13 2.9E-18 140.1 20.6 287 8-361 4-343 (348)
44 TIGR02845 spore_V_AD stage V s 99.4 1.7E-11 3.6E-16 120.8 20.6 90 53-153 46-135 (327)
45 PRK08304 stage V sporulation p 99.4 4.2E-12 9.1E-17 125.3 16.1 100 53-163 52-178 (337)
46 cd00751 thiolase Thiolase are 99.3 9E-12 2E-16 128.5 10.8 96 54-153 19-114 (386)
47 TIGR01930 AcCoA-C-Actrans acet 99.3 2.4E-11 5.2E-16 125.3 11.3 96 54-153 18-113 (386)
48 PRK12578 acetyl-CoA acetyltran 99.3 4E-11 8.6E-16 123.7 12.6 108 40-153 5-112 (385)
49 PRK05656 acetyl-CoA acetyltran 99.2 5.6E-11 1.2E-15 122.8 12.1 110 40-153 6-118 (393)
50 PRK08313 acetyl-CoA acetyltran 99.2 5.6E-11 1.2E-15 122.5 11.5 109 39-153 6-116 (386)
51 PRK12404 stage V sporulation p 99.2 9.1E-10 2E-14 108.3 19.0 169 54-252 51-246 (334)
52 PRK08235 acetyl-CoA acetyltran 99.2 6.8E-11 1.5E-15 122.1 11.8 97 53-153 22-118 (393)
53 PF02797 Chal_sti_synt_C: Chal 99.2 3.7E-11 8E-16 107.4 7.2 105 205-361 40-150 (151)
54 PRK06205 acetyl-CoA acetyltran 99.2 9.4E-11 2E-15 121.6 11.2 96 54-153 23-118 (404)
55 cd00834 KAS_I_II Beta-ketoacyl 99.2 2.6E-09 5.7E-14 110.6 21.4 91 56-152 70-190 (406)
56 PRK07108 acetyl-CoA acetyltran 99.2 1.2E-10 2.6E-15 120.3 10.8 97 53-153 23-120 (392)
57 PRK09051 beta-ketothiolase; Pr 99.2 1.4E-10 3E-15 119.8 11.4 97 53-153 23-120 (394)
58 PRK09052 acetyl-CoA acetyltran 99.2 2E-10 4.4E-15 118.7 12.1 96 54-153 28-125 (399)
59 PRK06059 lipid-transfer protei 99.1 2.3E-10 5.1E-15 118.5 11.6 107 40-153 8-115 (399)
60 PRK05790 putative acyltransfer 99.1 2.9E-10 6.4E-15 117.5 12.0 110 40-153 6-118 (393)
61 cd00829 SCP-x_thiolase Thiolas 99.1 2.6E-10 5.6E-15 117.1 10.9 106 42-153 2-107 (375)
62 PRK06065 acetyl-CoA acetyltran 99.1 3.6E-10 7.8E-15 116.6 11.8 110 38-153 11-121 (392)
63 PRK08170 acetyl-CoA acetyltran 99.1 4.7E-10 1E-14 117.1 12.7 110 40-153 7-119 (426)
64 PRK08242 acetyl-CoA acetyltran 99.1 3.9E-10 8.4E-15 116.6 11.4 97 53-153 24-121 (402)
65 smart00825 PKS_KS Beta-ketoacy 99.1 2.7E-09 5.9E-14 111.2 16.9 89 58-152 88-199 (424)
66 PRK06954 acetyl-CoA acetyltran 99.1 7E-10 1.5E-14 114.8 11.5 109 40-153 11-123 (397)
67 cd00826 nondecarbox_cond_enzym 99.1 7E-10 1.5E-14 114.6 10.8 95 54-153 20-115 (393)
68 PF00108 Thiolase_N: Thiolase, 99.1 8.4E-10 1.8E-14 108.0 10.8 97 53-153 22-118 (264)
69 PRK06064 acetyl-CoA acetyltran 99.1 1.1E-09 2.4E-14 113.1 12.0 108 40-153 6-115 (389)
70 PRK06158 thiolase; Provisional 99.0 2E-09 4.3E-14 111.0 11.5 103 38-150 10-112 (384)
71 PRK07516 acetyl-CoA acetyltran 99.0 2.5E-09 5.3E-14 110.5 12.2 109 39-153 5-115 (389)
72 PLN02287 3-ketoacyl-CoA thiola 99.0 2.9E-09 6.2E-14 111.7 11.7 111 39-153 49-164 (452)
73 PRK06289 acetyl-CoA acetyltran 99.0 2.9E-09 6.4E-14 110.5 11.4 107 40-153 7-120 (403)
74 PRK07851 acetyl-CoA acetyltran 99.0 4.6E-09 1E-13 109.0 11.9 109 40-153 6-120 (406)
75 PRK07661 acetyl-CoA acetyltran 98.9 4.8E-09 1E-13 108.3 11.1 96 54-153 24-120 (391)
76 PRK08963 fadI 3-ketoacyl-CoA t 98.9 6E-09 1.3E-13 108.9 11.0 110 40-153 9-121 (428)
77 PRK06157 acetyl-CoA acetyltran 98.9 1E-08 2.3E-13 106.2 12.5 109 39-153 10-118 (398)
78 TIGR03150 fabF beta-ketoacyl-a 98.9 1.1E-07 2.4E-12 98.6 19.2 89 58-152 72-190 (407)
79 PRK06366 acetyl-CoA acetyltran 98.9 1.3E-08 2.7E-13 105.2 11.8 110 40-153 6-118 (388)
80 PRK07850 acetyl-CoA acetyltran 98.9 1.5E-08 3.3E-13 104.5 11.8 96 54-153 23-119 (387)
81 TIGR02446 FadI fatty oxidation 98.8 1.3E-08 2.9E-13 106.2 10.7 111 39-153 10-123 (430)
82 PRK08256 lipid-transfer protei 98.8 1.5E-08 3.3E-13 104.7 10.7 106 40-153 5-110 (391)
83 PRK06365 acetyl-CoA acetyltran 98.8 1.9E-08 4.2E-13 105.0 11.5 110 39-153 19-129 (430)
84 cd00833 PKS polyketide synthas 98.8 4.6E-08 9.9E-13 101.7 14.2 90 57-152 87-199 (421)
85 PRK08131 acetyl-CoA acetyltran 98.8 1.7E-08 3.8E-13 104.4 10.9 96 54-153 23-119 (401)
86 PRK06445 acetyl-CoA acetyltran 98.8 1.3E-08 2.8E-13 105.4 9.8 96 54-153 29-125 (394)
87 PLN02644 acetyl-CoA C-acetyltr 98.8 2.9E-08 6.2E-13 102.8 12.2 96 54-153 22-117 (394)
88 PRK06633 acetyl-CoA acetyltran 98.8 1.4E-08 3.1E-13 104.6 9.2 96 54-153 24-119 (392)
89 PRK09050 beta-ketoadipyl CoA t 98.8 2.3E-08 4.9E-13 103.6 10.5 96 54-153 23-120 (401)
90 cd00828 elong_cond_enzymes "el 98.8 1.4E-07 2.9E-12 98.0 16.2 92 56-152 71-191 (407)
91 PRK13359 beta-ketoadipyl CoA t 98.8 3.1E-08 6.8E-13 102.5 10.9 96 54-153 23-120 (400)
92 TIGR02430 pcaF beta-ketoadipyl 98.8 4E-08 8.6E-13 101.7 11.6 96 54-153 22-119 (400)
93 PTZ00455 3-ketoacyl-CoA thiola 98.8 4.6E-08 1E-12 102.4 11.6 98 54-153 45-150 (438)
94 PRK06504 acetyl-CoA acetyltran 98.7 5.5E-08 1.2E-12 100.4 11.0 96 54-153 23-119 (390)
95 PRK08947 fadA 3-ketoacyl-CoA t 98.7 6.1E-08 1.3E-12 100.0 10.6 96 54-153 24-121 (387)
96 PRK06501 3-oxoacyl-(acyl carri 98.7 1.6E-06 3.5E-11 90.6 20.9 140 6-152 10-204 (425)
97 PRK08142 acetyl-CoA acetyltran 98.7 1E-07 2.2E-12 98.4 11.0 105 39-153 8-112 (388)
98 PRK09268 acetyl-CoA acetyltran 98.7 1.5E-07 3.2E-12 98.4 11.9 96 54-153 28-123 (427)
99 PRK07801 acetyl-CoA acetyltran 98.6 1.4E-07 3.1E-12 97.2 11.0 110 40-153 6-119 (382)
100 TIGR02445 fadA fatty oxidation 98.6 1.4E-07 3E-12 97.3 9.0 96 54-153 22-119 (385)
101 PRK07314 3-oxoacyl-(acyl carri 98.6 2.7E-06 5.9E-11 88.4 18.4 90 57-152 72-191 (411)
102 PRK07855 lipid-transfer protei 98.6 4.1E-07 8.9E-12 93.9 11.6 102 39-150 7-108 (386)
103 PRK08257 acetyl-CoA acetyltran 98.5 6.4E-07 1.4E-11 95.3 12.3 108 40-153 8-119 (498)
104 PRK06333 3-oxoacyl-(acyl carri 98.5 7E-06 1.5E-10 85.8 20.0 89 58-152 83-202 (424)
105 PRK06066 acetyl-CoA acetyltran 98.5 6.4E-07 1.4E-11 92.2 11.7 107 39-153 7-115 (385)
106 PF08545 ACP_syn_III: 3-Oxoacy 98.5 1.6E-07 3.5E-12 74.9 5.4 47 115-163 1-65 (80)
107 PRK05952 3-oxoacyl-(acyl carri 98.5 1.3E-05 2.9E-10 82.5 20.9 135 7-152 2-175 (381)
108 PRK07103 polyketide beta-ketoa 98.4 1.4E-05 3.1E-10 83.2 19.3 90 57-152 80-196 (410)
109 PTZ00050 3-oxoacyl-acyl carrie 98.4 1.3E-05 2.9E-10 83.7 19.0 90 57-152 77-197 (421)
110 PRK06025 acetyl-CoA acetyltran 98.4 1.5E-06 3.2E-11 90.1 11.2 97 53-153 25-122 (417)
111 PLN02836 3-oxoacyl-[acyl-carri 98.4 7.9E-06 1.7E-10 85.8 15.9 90 57-152 93-213 (437)
112 PRK08722 3-oxoacyl-(acyl carri 98.4 1E-05 2.2E-10 84.5 15.9 140 7-153 4-194 (414)
113 KOG1406 Peroxisomal 3-ketoacyl 98.4 8E-07 1.7E-11 84.4 6.8 110 36-153 6-117 (408)
114 cd00832 CLF Chain-length facto 98.3 1.3E-05 2.9E-10 83.1 16.3 89 58-153 72-190 (399)
115 PRK08439 3-oxoacyl-(acyl carri 98.3 3.9E-05 8.4E-10 79.9 19.5 90 57-152 72-191 (406)
116 PRK09116 3-oxoacyl-(acyl carri 98.3 4.2E-05 9E-10 79.6 19.3 89 58-153 74-194 (405)
117 PRK09185 3-oxoacyl-(acyl carri 98.3 6E-05 1.3E-09 78.1 19.4 52 95-152 138-189 (392)
118 PRK06690 acetyl-CoA acetyltran 98.3 4.2E-06 9E-11 85.6 9.9 91 54-153 22-112 (361)
119 PRK07937 lipid-transfer protei 98.3 5.8E-06 1.2E-10 84.3 10.9 108 39-153 5-113 (352)
120 PF07451 SpoVAD: Stage V sporu 98.2 0.00034 7.4E-09 68.5 21.1 96 57-163 51-173 (329)
121 PRK06519 3-oxoacyl-(acyl carri 98.2 4E-05 8.6E-10 79.5 15.2 138 6-152 5-204 (398)
122 PLN02787 3-oxoacyl-[acyl-carri 98.2 4.9E-05 1.1E-09 81.6 15.9 139 7-152 129-320 (540)
123 PRK14691 3-oxoacyl-(acyl carri 98.2 4.4E-05 9.6E-10 77.5 14.7 90 57-153 4-121 (342)
124 PRK07967 3-oxoacyl-(acyl carri 98.1 0.00014 3.1E-09 75.6 17.8 140 7-153 2-192 (406)
125 PRK07910 3-oxoacyl-(acyl carri 98.0 0.00079 1.7E-08 70.4 20.3 89 58-153 84-201 (418)
126 PF00109 ketoacyl-synt: Beta-k 98.0 3.9E-05 8.4E-10 74.1 9.4 91 57-153 87-206 (254)
127 COG0183 PaaJ Acetyl-CoA acetyl 97.8 9.4E-05 2E-09 76.6 8.8 93 57-153 27-122 (392)
128 TIGR02813 omega_3_PfaA polyket 97.4 0.0033 7.2E-08 78.2 16.3 52 96-153 185-236 (2582)
129 KOG1390 Acetyl-CoA acetyltrans 97.1 0.0011 2.5E-08 65.0 7.0 96 54-153 27-122 (396)
130 COG3321 Polyketide synthase mo 97.1 0.0065 1.4E-07 70.5 14.0 88 60-153 94-204 (1061)
131 COG0304 FabB 3-oxoacyl-(acyl-c 97.1 0.0064 1.4E-07 63.2 12.4 92 56-153 70-192 (412)
132 KOG1391 Acetyl-CoA acetyltrans 96.8 0.0017 3.6E-08 62.0 5.0 97 54-155 25-123 (396)
133 KOG1392 Acetyl-CoA acetyltrans 96.3 0.0029 6.3E-08 61.2 3.1 95 55-153 64-158 (465)
134 KOG1389 3-oxoacyl CoA thiolase 95.5 0.029 6.3E-07 55.1 6.1 95 54-153 58-153 (435)
135 PF13723 Ketoacyl-synt_2: Beta 95.5 0.13 2.8E-06 48.9 10.3 101 56-163 33-171 (218)
136 PF08541 ACP_syn_III_C: 3-Oxoa 95.0 0.074 1.6E-06 42.8 6.3 74 69-152 1-79 (90)
137 KOG1394 3-oxoacyl-(acyl-carrie 94.8 0.098 2.1E-06 52.5 7.6 92 56-153 93-217 (440)
138 PRK06147 3-oxoacyl-(acyl carri 94.0 0.25 5.5E-06 50.3 8.9 100 61-162 236-343 (348)
139 PRK07850 acetyl-CoA acetyltran 92.6 1.2 2.7E-05 46.0 11.5 124 22-161 252-386 (387)
140 PRK13359 beta-ketoadipyl CoA t 92.4 1.1 2.3E-05 46.8 10.7 125 22-161 263-399 (400)
141 TIGR02430 pcaF beta-ketoadipyl 92.3 0.82 1.8E-05 47.6 9.7 75 22-106 263-338 (400)
142 PRK09051 beta-ketothiolase; Pr 91.7 1.5 3.2E-05 45.6 10.8 75 22-106 259-334 (394)
143 PRK06025 acetyl-CoA acetyltran 91.6 0.99 2.1E-05 47.2 9.4 123 22-161 282-416 (417)
144 PRK09050 beta-ketoadipyl CoA t 91.6 1.3 2.8E-05 46.2 10.3 75 22-106 264-339 (401)
145 PRK06205 acetyl-CoA acetyltran 91.2 1.2 2.6E-05 46.4 9.6 126 22-161 265-402 (404)
146 cd00751 thiolase Thiolase are 91.1 1.4 3.1E-05 45.5 10.0 94 60-160 286-385 (386)
147 KOG1202 Animal-type fatty acid 91.0 0.66 1.4E-05 53.3 7.6 92 57-153 87-200 (2376)
148 TIGR01930 AcCoA-C-Actrans acet 90.4 1.8 3.9E-05 44.7 10.0 127 22-160 253-386 (386)
149 PRK06816 3-oxoacyl-(acyl carri 90.1 2.1 4.6E-05 44.1 10.2 85 59-153 272-366 (378)
150 PRK09052 acetyl-CoA acetyltran 89.8 1.7 3.8E-05 45.2 9.3 75 22-106 264-339 (399)
151 PRK12879 3-oxoacyl-(acyl carri 89.7 1.5 3.3E-05 43.8 8.6 92 61-159 227-322 (325)
152 PRK08242 acetyl-CoA acetyltran 89.7 2.1 4.6E-05 44.6 9.8 127 22-161 267-401 (402)
153 PRK05790 putative acyltransfer 89.7 2.7 5.8E-05 43.5 10.6 127 22-161 258-392 (393)
154 PF02803 Thiolase_C: Thiolase, 89.5 2.6 5.5E-05 36.4 8.6 93 61-161 24-123 (123)
155 PRK07661 acetyl-CoA acetyltran 89.5 1.8 4E-05 44.8 9.2 127 23-161 257-390 (391)
156 PRK06366 acetyl-CoA acetyltran 89.5 2 4.4E-05 44.5 9.5 127 22-161 252-386 (388)
157 PRK06690 acetyl-CoA acetyltran 88.9 4.1 8.8E-05 41.8 11.1 125 22-161 225-359 (361)
158 PRK06840 hypothetical protein; 88.8 2.3 4.9E-05 42.9 9.1 94 60-161 238-335 (339)
159 PRK05656 acetyl-CoA acetyltran 87.5 3.3 7.1E-05 43.0 9.5 128 22-162 258-393 (393)
160 cd00327 cond_enzymes Condensin 87.4 7.6 0.00016 36.9 11.4 91 57-152 143-245 (254)
161 TIGR00748 HMG_CoA_syn_Arc hydr 87.3 1.7 3.6E-05 44.3 7.0 93 56-159 205-305 (345)
162 PRK05963 3-oxoacyl-(acyl carri 87.1 2.4 5.2E-05 42.4 8.1 94 58-159 226-324 (326)
163 PRK07204 3-oxoacyl-(acyl carri 87.1 2.2 4.8E-05 42.8 7.8 84 61-151 232-317 (329)
164 PRK08235 acetyl-CoA acetyltran 86.9 3 6.4E-05 43.3 8.8 127 23-161 259-392 (393)
165 CHL00203 fabH 3-oxoacyl-acyl-c 86.8 2.1 4.6E-05 42.9 7.5 92 61-159 228-323 (326)
166 PRK08257 acetyl-CoA acetyltran 86.6 4.5 9.7E-05 43.4 10.2 134 22-163 250-399 (498)
167 PRK09258 3-oxoacyl-(acyl carri 86.6 2.7 5.9E-05 42.2 8.2 85 59-151 239-326 (338)
168 PRK08963 fadI 3-ketoacyl-CoA t 86.2 5.5 0.00012 41.8 10.4 62 22-87 275-337 (428)
169 cd00825 decarbox_cond_enzymes 85.6 6.5 0.00014 39.1 10.3 78 58-138 204-286 (332)
170 PLN02287 3-ketoacyl-CoA thiola 84.8 4.8 0.0001 42.6 9.2 98 61-164 333-437 (452)
171 TIGR02445 fadA fatty oxidation 84.5 9.8 0.00021 39.4 11.2 93 61-161 282-384 (385)
172 PRK06504 acetyl-CoA acetyltran 84.5 9.2 0.0002 39.7 11.0 44 58-106 287-330 (390)
173 PF02801 Ketoacyl-synt_C: Beta 83.7 1.6 3.4E-05 37.1 4.1 78 61-139 27-111 (119)
174 PLN02644 acetyl-CoA C-acetyltr 83.1 6.2 0.00013 40.9 9.1 94 60-161 292-392 (394)
175 PRK06445 acetyl-CoA acetyltran 83.0 11 0.00023 39.2 10.7 124 23-161 260-393 (394)
176 PLN02326 3-oxoacyl-[acyl-carri 82.9 5.4 0.00012 41.1 8.5 80 61-150 282-366 (379)
177 TIGR00747 fabH 3-oxoacyl-(acyl 82.7 5 0.00011 39.9 8.0 85 59-151 219-306 (318)
178 cd00830 KAS_III Ketoacyl-acyl 82.6 4 8.7E-05 40.5 7.3 84 59-150 223-309 (320)
179 PRK07851 acetyl-CoA acetyltran 82.2 4.9 0.00011 41.9 7.9 127 22-161 270-404 (406)
180 PRK06633 acetyl-CoA acetyltran 81.5 6.5 0.00014 40.8 8.5 59 22-85 257-316 (392)
181 PRK09352 3-oxoacyl-(acyl carri 81.3 5.3 0.00011 39.7 7.6 91 61-159 221-316 (319)
182 PRK09268 acetyl-CoA acetyltran 80.5 4.8 0.0001 42.3 7.2 65 22-87 272-337 (427)
183 PRK14691 3-oxoacyl-(acyl carri 80.2 11 0.00024 38.4 9.5 58 58-118 205-263 (342)
184 PRK08131 acetyl-CoA acetyltran 79.4 11 0.00023 39.3 9.3 59 22-85 263-322 (401)
185 PRK07108 acetyl-CoA acetyltran 79.3 5.8 0.00013 41.1 7.3 25 60-84 291-315 (392)
186 PRK07515 3-oxoacyl-(acyl carri 77.8 9.4 0.0002 39.1 8.3 84 58-150 270-358 (372)
187 PRK06059 lipid-transfer protei 76.9 20 0.00044 37.1 10.5 40 62-106 276-315 (399)
188 PRK06064 acetyl-CoA acetyltran 76.8 19 0.00042 37.1 10.3 79 22-106 219-300 (389)
189 PRK12578 acetyl-CoA acetyltran 76.5 9.8 0.00021 39.2 8.0 80 22-106 217-299 (385)
190 PRK08947 fadA 3-ketoacyl-CoA t 75.6 27 0.00058 36.1 10.9 41 61-106 284-324 (387)
191 cd00828 elong_cond_enzymes "el 75.3 17 0.00036 37.6 9.4 79 58-138 273-357 (407)
192 PRK07910 3-oxoacyl-(acyl carri 75.2 17 0.00037 38.0 9.5 46 60-106 287-333 (418)
193 PRK06954 acetyl-CoA acetyltran 73.6 12 0.00026 38.9 7.8 59 22-84 262-320 (397)
194 PRK07937 lipid-transfer protei 73.3 28 0.0006 35.6 10.2 117 22-149 212-334 (352)
195 PRK04262 hypothetical protein; 72.1 12 0.00026 38.0 7.2 91 58-159 208-306 (347)
196 PRK07314 3-oxoacyl-(acyl carri 69.6 17 0.00037 37.6 7.9 77 61-139 278-360 (411)
197 PRK08722 3-oxoacyl-(acyl carri 68.2 18 0.00038 37.8 7.6 78 60-138 279-362 (414)
198 cd00832 CLF Chain-length facto 67.7 31 0.00067 35.8 9.3 78 58-139 269-352 (399)
199 TIGR02446 FadI fatty oxidation 67.4 17 0.00037 38.2 7.4 61 22-86 277-338 (430)
200 PF02801 Ketoacyl-synt_C: Beta 67.3 21 0.00045 30.2 6.6 22 225-246 39-60 (119)
201 COG0332 FabH 3-oxoacyl-[acyl-c 65.9 8.4 0.00018 38.9 4.5 85 56-150 220-309 (323)
202 PRK06289 acetyl-CoA acetyltran 65.9 21 0.00046 37.0 7.7 41 61-106 278-318 (403)
203 PRK05952 3-oxoacyl-(acyl carri 65.8 29 0.00063 35.8 8.6 47 58-105 253-300 (381)
204 PRK08142 acetyl-CoA acetyltran 65.0 8.1 0.00018 40.0 4.3 79 22-106 218-297 (388)
205 cd00834 KAS_I_II Beta-ketoacyl 64.5 17 0.00037 37.3 6.7 80 59-140 275-360 (406)
206 PRK06157 acetyl-CoA acetyltran 63.9 34 0.00074 35.5 8.8 79 22-106 224-310 (398)
207 PRK06066 acetyl-CoA acetyltran 63.6 15 0.00031 38.2 5.9 77 22-106 218-300 (385)
208 cd00833 PKS polyketide synthas 63.1 50 0.0011 34.0 9.9 81 58-139 278-366 (421)
209 PRK09185 3-oxoacyl-(acyl carri 62.1 22 0.00048 36.7 7.0 74 61-139 262-341 (392)
210 PLN02787 3-oxoacyl-[acyl-carri 61.1 21 0.00047 38.7 6.8 75 61-138 407-487 (540)
211 PRK08170 acetyl-CoA acetyltran 60.7 46 0.00099 34.9 9.1 26 61-86 309-334 (426)
212 PRK09116 3-oxoacyl-(acyl carri 60.4 55 0.0012 34.0 9.6 46 59-105 275-321 (405)
213 PTZ00050 3-oxoacyl-acyl carrie 60.2 31 0.00067 36.0 7.7 79 59-138 283-368 (421)
214 TIGR03150 fabF beta-ketoacyl-a 59.9 27 0.00059 35.9 7.2 76 61-138 277-358 (407)
215 COG0304 FabB 3-oxoacyl-(acyl-c 58.1 21 0.00045 37.4 5.9 111 22-137 238-356 (412)
216 PTZ00455 3-ketoacyl-CoA thiola 57.9 14 0.0003 39.0 4.6 79 22-106 266-351 (438)
217 PRK09604 UGMP family protein; 57.6 40 0.00087 34.1 7.8 29 58-86 52-80 (332)
218 PRK06158 thiolase; Provisional 57.4 16 0.00034 37.8 4.9 43 59-106 254-296 (384)
219 smart00825 PKS_KS Beta-ketoacy 56.9 46 0.001 34.4 8.4 48 58-106 278-326 (424)
220 PRK06333 3-oxoacyl-(acyl carri 56.4 32 0.0007 35.8 7.1 46 59-105 288-334 (424)
221 cd00826 nondecarbox_cond_enzym 56.0 36 0.00079 35.3 7.3 41 61-106 271-311 (393)
222 PRK08313 acetyl-CoA acetyltran 55.6 22 0.00048 36.7 5.6 80 22-106 216-299 (386)
223 cd00831 CHS_like Chalcone and 55.5 29 0.00062 35.3 6.4 82 59-150 259-350 (361)
224 PRK07516 acetyl-CoA acetyltran 55.4 52 0.0011 33.9 8.4 43 59-106 260-302 (389)
225 PRK08256 lipid-transfer protei 54.7 56 0.0012 33.7 8.4 41 61-106 266-306 (391)
226 cd00829 SCP-x_thiolase Thiolas 53.6 62 0.0014 32.9 8.6 43 59-106 251-293 (375)
227 COG3425 PksG 3-hydroxy-3-methy 53.6 29 0.00064 35.7 5.9 87 56-150 206-297 (377)
228 PRK07855 lipid-transfer protei 53.5 19 0.00041 37.3 4.7 79 22-106 223-308 (386)
229 PRK06365 acetyl-CoA acetyltran 52.8 62 0.0013 34.0 8.5 41 61-106 295-337 (430)
230 PRK06501 3-oxoacyl-(acyl carri 51.2 47 0.001 34.8 7.3 44 61-105 291-335 (425)
231 PLN02836 3-oxoacyl-[acyl-carri 50.7 1.1E+02 0.0023 32.2 9.9 47 59-106 299-346 (437)
232 PRK06519 3-oxoacyl-(acyl carri 50.3 50 0.0011 34.3 7.2 45 60-106 281-326 (398)
233 PRK12880 3-oxoacyl-(acyl carri 47.3 57 0.0012 33.3 7.0 43 59-106 242-284 (353)
234 PRK07103 polyketide beta-ketoa 46.4 1.1E+02 0.0024 31.7 9.2 28 62-89 284-312 (410)
235 cd00827 init_cond_enzymes "ini 43.3 87 0.0019 30.9 7.5 87 57-152 221-315 (324)
236 TIGR01835 HMG-CoA-S_prok 3-hyd 41.2 59 0.0013 33.5 6.1 29 59-87 205-233 (379)
237 PF01135 PCMT: Protein-L-isoas 39.7 25 0.00055 33.1 2.8 44 313-357 48-91 (209)
238 PRK06065 acetyl-CoA acetyltran 39.7 59 0.0013 33.8 5.8 79 22-106 224-306 (392)
239 COG1214 Inactive homolog of me 39.5 55 0.0012 31.1 5.1 63 54-118 34-96 (220)
240 TIGR03723 bact_gcp putative gl 39.1 1.1E+02 0.0025 30.6 7.6 59 58-118 50-108 (314)
241 PRK07801 acetyl-CoA acetyltran 37.3 37 0.00079 35.0 3.8 40 62-106 283-322 (382)
242 PF07736 CM_1: Chorismate muta 37.0 50 0.0011 28.2 3.9 48 64-118 25-75 (118)
243 TIGR00329 gcp_kae1 metallohydr 34.4 56 0.0012 32.5 4.5 59 58-118 49-107 (305)
244 PRK14878 UGMP family protein; 33.8 1.4E+02 0.003 30.1 7.3 27 60-86 47-73 (323)
245 KOG1394 3-oxoacyl-(acyl-carrie 32.7 37 0.0008 34.7 2.8 81 22-106 261-348 (440)
246 KOG1406 Peroxisomal 3-ketoacyl 32.6 56 0.0012 32.0 3.9 44 58-106 271-314 (408)
247 TIGR01796 CM_mono_aroH monofun 31.8 73 0.0016 27.2 4.0 58 55-118 12-75 (117)
248 TIGR03725 bact_YeaZ universal 31.0 68 0.0015 29.8 4.2 31 56-86 32-62 (202)
249 PF00814 Peptidase_M22: Glycop 27.9 52 0.0011 32.2 2.9 29 58-86 30-58 (268)
250 PLN03172 chalcone synthase fam 27.1 1.7E+02 0.0036 30.4 6.7 34 202-238 97-131 (393)
251 PRK08304 stage V sporulation p 26.3 4.6E+02 0.0099 26.7 9.3 89 59-151 205-310 (337)
252 PF01890 CbiG_C: Cobalamin syn 25.8 65 0.0014 27.5 2.8 38 40-84 3-40 (121)
253 cd02185 AroH Chorismate mutase 25.7 1.1E+02 0.0025 26.0 4.2 59 55-118 12-75 (117)
254 PLN03169 chalcone synthase fam 24.7 1.8E+02 0.004 30.0 6.5 81 62-150 284-375 (391)
255 COG1148 HdrA Heterodisulfide r 24.4 93 0.002 33.4 4.1 66 79-153 54-135 (622)
256 PRK12404 stage V sporulation p 23.6 5.2E+02 0.011 26.3 9.0 89 59-151 203-308 (334)
257 COG0533 QRI7 Metal-dependent p 23.4 1.5E+02 0.0033 30.2 5.3 56 59-118 52-109 (342)
258 PRK13410 molecular chaperone D 23.3 1.5E+02 0.0033 33.1 5.8 70 57-132 307-376 (668)
259 TIGR03722 arch_KAE1 universal 22.3 1E+02 0.0022 31.0 3.9 26 61-86 49-74 (322)
260 KOG2708 Predicted metalloprote 22.0 1.2E+02 0.0026 29.2 4.0 67 59-139 51-118 (336)
261 PLN03168 chalcone synthase; Pr 22.0 2.2E+02 0.0047 29.5 6.3 36 202-240 96-132 (389)
262 PTZ00340 O-sialoglycoprotein e 21.6 1.4E+02 0.003 30.6 4.7 58 59-118 51-108 (345)
263 TIGR03285 methan_mark_14 putat 21.3 1.1E+02 0.0024 31.4 3.7 35 52-86 60-94 (445)
264 PLN02854 3-ketoacyl-CoA syntha 21.1 3.8E+02 0.0083 29.0 8.1 87 61-152 387-482 (521)
265 PF05378 Hydant_A_N: Hydantoin 20.8 1.1E+02 0.0023 28.0 3.4 36 52-87 30-65 (176)
266 PRK07027 cobalamin biosynthesi 20.6 1E+02 0.0022 26.5 3.1 58 39-106 4-61 (126)
No 1
>KOG1393 consensus Hydroxymethylglutaryl-CoA synthase [Lipid transport and metabolism]
Probab=100.00 E-value=5.1e-100 Score=736.38 Aligned_cols=432 Identities=58% Similarity=0.927 Sum_probs=402.1
Q ss_pred CCCceeEEeEEEEEcCCceechhHHhhhhCCCcCeeeEcccceEEeccCCCCCHHHHHHHHHHHHHHHcCCCcCCcCEEE
Q 012909 4 WHPKNVGILALDIYFPPTCVLQEALEVHDGVSKGKYTVGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLE 83 (453)
Q Consensus 4 ~~~~~vgI~~i~~y~P~~~v~~~~l~~~~g~~~~k~~~Gig~r~~av~~~~ed~~~la~~Aa~~aL~~agi~~~~Id~li 83 (453)
.+|.+|||.+|.+|+|.++|+|+||+++.|++.+||++|+||.+|+||.+.||+.+|+.++++++|++..|+++.|++|.
T Consensus 7 ~~p~dvGI~aieiyfP~~yV~Q~elEk~d~vs~gKytIGLGq~~MgfcsdrEDi~Sl~ltvvs~Lmery~i~~~~IGRLE 86 (462)
T KOG1393|consen 7 NWPKDVGIIAIEIYFPSQYVDQEELEKFDGVSAGKYTIGLGQTQMGFCSDREDIISLSLTVVSRLMERYNIDPDSIGRLE 86 (462)
T ss_pred cCccccceeEEEEEcCccccChhhHhhcCCccccceEeccCcceecccCchhhhhhhhHHHHHHHHHHhCCChhhcceEE
Confidence 34779999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEcccCCCCCccHHHHHHHHhcccCCCCeeEEeeCCcChhHHHHHHHHHHHHHhCCCCCCeEEEEEeecc----------
Q 012909 84 VGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDTA---------- 153 (453)
Q Consensus 84 ~~t~s~~~~~~~~a~~l~~~Lgl~G~~~~~~~dv~~aC~gg~~AL~~A~~~v~sg~~~~~~aLVv~~d~~---------- 153 (453)
|||||.+|.+|++.+.|+++++.+|+.++.++|..|||+||++||.+|.+||+|+.||||.+||||+|++
T Consensus 87 VGTETiiDKSKSVKt~LMqLF~~sgNtdIEGiDttnACYGGtaALfnavnWiESssWDGr~aivV~gDIAvY~~G~aRpT 166 (462)
T KOG1393|consen 87 VGTETIIDKSKSVKTVLMQLFEESGNTDIEGIDTTNACYGGTAALFNAVNWIESSSWDGRYAIVVCGDIAVYAKGNARPT 166 (462)
T ss_pred ecceeccccchHHHHHHHHHhhhcCCCccccccccccccccHHHHHHHhhhhhhcccCCceeEEEEeeEEEecCCCCCCC
Confidence 9999999999999999999999889999999999999999999999999999999999999999999998
Q ss_pred ----ceeeeecCCCCceeccCceeeeccccccccccCCCCCCceecCcchHHHHHHHHHHHHHHHHHHHhhh--hcCCCC
Q 012909 154 ----AVAMLIGPDAPIAFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKYFCQKFEKL--EGRQFS 227 (453)
Q Consensus 154 ----AvA~Ll~~~~~l~~~~~~~~~~~~~~~df~~p~~~~~~~~vdG~~s~~~y~~al~~~~~~~~~~~~~~--~~~~~~ 227 (453)
||||||+|++|+.|+++++++||++.||||+|+..++||+|||++|++||+.|++.||..|+++.... ...+..
T Consensus 167 GGAgAVAmLIgPnApi~ferglr~thM~hayDFyKPdl~SEyPvVDGklSi~cYl~Ald~cY~~~~kK~~~~~~~~~~~~ 246 (462)
T KOG1393|consen 167 GGAGAVAMLIGPNAPIIFERGLRATHMQHAYDFYKPDLLSEYPVVDGKLSIQCYLSALDRCYTVYRKKIAAQWQKSGSDN 246 (462)
T ss_pred CCcceEEEEEcCCCceEecccchhhhhhhhhhccCCCCCCcCceecCeehHHHHHHHHHHHHHHHHHHHHHHhccccCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999988643 122455
Q ss_pred ccCccEEEecCcchHHHHHHHHhhhhhhhhccCCchhhHHhhhccCCCCCCccccccchhHHHHHHHHHHHHhhhhcCCC
Q 012909 228 MLDVDYFVFHSPYNKLVQKSFARLFFNDFLRNASSVDEIAKEKLAPYSTLSDVESYQSRDLEKASQQVAKQLYDLKVQPS 307 (453)
Q Consensus 228 ~~d~d~~v~H~p~~km~~ka~~~l~~~~~~~~~~~~~~~~~~~l~~~l~l~~e~~~~~~~~~k~~~~~~~~~~~~~~~~s 307 (453)
+++||+++||.|++||++|+++||+||||..+++...+.. ...-.+..+++|+||+++|.+.++.++.|.+|+.||
T Consensus 247 l~~fdy~ifHsP~cKlvqKs~arl~ynDf~~~~~~~~~~~----~~~~~~~l~~s~~dr~~ek~~~~~s~~~~~~Kt~~s 322 (462)
T KOG1393|consen 247 LNSFDYIIFHSPYCKLVQKSLARLLYNDFLLNPSQLPESA----GLESTLKLDESYTDRDLEKAFIKISKPIFKKKTKPS 322 (462)
T ss_pred cccCCeEEEeCchhhhHHHHHHHhhhhhhhhccccccccc----cccccccccccccchHHHHHHHHHhHHHHHhhccce
Confidence 7899999999999999999999999999998777533211 112567889999999999999999999999999999
Q ss_pred cccccccCccccchHHHHHHHHHhhcC-cCCCCCEEEEEEecchhhheeeEEEEecCCCCCchhhhhhcCChHHHhccCc
Q 012909 308 TLIPKQVGNMYTASLYAAFASLLHEKH-SSLEGKRVIMFSYGSGLTATMFSLQLQEGHRPFSLSNIVKVMDVPGKLKLRH 386 (453)
Q Consensus 308 ~~~~~~~GN~~taSl~l~L~sll~~~~-~~~~Gd~ill~syGsG~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L~~r~ 386 (453)
+.+++++|||||+|+|.+|+++|...+ ....|+||+|||||||+++++|++++..+.+| .-+.++..+++..||++|+
T Consensus 323 l~~~~~~GNmYTaSly~~l~sll~~~~~d~l~Gkrig~FSYGSGlAAs~fs~~v~~da~p-~~k~~~~~~d~~~rL~~R~ 401 (462)
T KOG1393|consen 323 LLAPRRNGNMYTASLYASLASLLSAVPADELAGKRIGMFSYGSGLAASMFSLRVTQDATP-LDKIIASLTDLKKRLDSRK 401 (462)
T ss_pred eEeeccCCccccHHHHHHHHHHHhccchhhhhccEEEEEeecCcchhheEEEEecCCCCc-hhhhhHhhhhHHHHhhhcc
Confidence 999999999999999999999998732 34799999999999999999999999885444 2334567789999999999
Q ss_pred cCCHHHHHHHHHHHHHhcCCCCCccCCCCCCcCCCcEEEEeeCCCcceEeeeec
Q 012909 387 EFPPEKFVDIMKLMEHRYGAKDFVTSKDSSLLSPGTCYLTEVDSMFRRFYAKKE 440 (453)
Q Consensus 387 ~~~~~~y~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~~R~Y~~~~ 440 (453)
+++|++|++.+++||++|++.+|.|.+++++++||+|||++||++|||.|.+++
T Consensus 402 ~~tPe~F~e~melre~~~~~~n~~p~gs~~~Lf~gtyYL~~vd~~~RRsY~~~~ 455 (462)
T KOG1393|consen 402 CVTPEEFTEIMELREDTHHKVNFVPQGSIESLFPGTYYLKRVDELHRRSYTLKP 455 (462)
T ss_pred ccCHHHHHHHHHhhhhhcccccCCCCCchhhcCCCceehhhhhHHhhhccccCC
Confidence 999999999999999999999999999999999999999999999999999998
No 2
>PLN02577 hydroxymethylglutaryl-CoA synthase
Probab=100.00 E-value=7.4e-93 Score=732.99 Aligned_cols=444 Identities=81% Similarity=1.270 Sum_probs=403.0
Q ss_pred CCceeEEeEEEEEcCCceechhHHhhhhCCCcCeeeEcccceEEeccCCCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEE
Q 012909 5 HPKNVGILALDIYFPPTCVLQEALEVHDGVSKGKYTVGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEV 84 (453)
Q Consensus 5 ~~~~vgI~~i~~y~P~~~v~~~~l~~~~g~~~~k~~~Gig~r~~av~~~~ed~~~la~~Aa~~aL~~agi~~~~Id~li~ 84 (453)
+|++|||.++++|+|+++|++++|++.+|++++||++||++|++++++++||+++||++||+++|+++|++|++||+||+
T Consensus 1 ~~~~vgI~gig~Y~P~~~v~n~eLa~~~g~~~~~~~~GI~~r~~ava~~~Ed~~tmA~~AA~~aL~~agid~~~Idlliv 80 (459)
T PLN02577 1 MPKNVGILAMEVYFPPTCVQQEALEAHDGVSKGKYTIGLGQDCMAFCTDVEDVISMSLTVVKSLLEKYNIDPKQIGRLEV 80 (459)
T ss_pred CCCccEEEEEEEeCCCeEEcHHHHHHHhCCCHHHHhhccceeEeccCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEE
Confidence 37899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EcccCCCCCccHHHHHHHHhcccCCCCeeEEeeCCcChhHHHHHHHHHHHHHhCCCCCCeEEEEEeecc-----------
Q 012909 85 GSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDTA----------- 153 (453)
Q Consensus 85 ~t~s~~~~~~~~a~~l~~~Lgl~G~~~~~~~dv~~aC~gg~~AL~~A~~~v~sg~~~~~~aLVv~~d~~----------- 153 (453)
+|+|+++.+|++|++|++.++++|.+++++||+++||+|++.||++|.+||++|.+|+++||||++|++
T Consensus 81 aTeT~~d~~ps~A~~v~~ll~~LG~~~~~afDi~~AC~G~~~AL~~A~~~i~sg~~~~~~aLVV~aD~a~~~~~~~e~t~ 160 (459)
T PLN02577 81 GSETVIDKSKSIKTFLMQLFEESGNTDIEGVDSTNACYGGTAALLNCVNWVESSSWDGRYGLVVAADSAVYAEGPARPTG 160 (459)
T ss_pred EcCCCCCCCCchHHHHHHHHHHhCCCCcEEeehhhhhHHHHHHHHHHHHHHHcCCCCCCeEEEEEechhhccCCCCCCCC
Confidence 999999999999999997777666789999999999999999999999999999877899999999995
Q ss_pred ---ceeeeecCCCCceeccCceeeeccccccccccCCCCCCceecCcchHHHHHHHHHHHHHHHHHHHhhhhcCCCCccC
Q 012909 154 ---AVAMLIGPDAPIAFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKYFCQKFEKLEGRQFSMLD 230 (453)
Q Consensus 154 ---AvA~Ll~~~~~l~~~~~~~~~~~~~~~df~~p~~~~~~~~vdG~~s~~~y~~al~~~~~~~~~~~~~~~~~~~~~~d 230 (453)
|+||||+++|++.++....++++.+++|||||.+.++||.|||++|+.+|++++..+++.|+++.+...+.+++++|
T Consensus 161 GdGA~A~lv~~~~~~~l~~~~~g~~~~~~~Df~rP~~~~~~~~vdG~~s~~~yl~~~~~~~~~~~~k~~~~~~~g~~~~d 240 (459)
T PLN02577 161 GAGAVAMLVGPNAPIVFESKYRGSHMAHVYDFYKPDLASEYPVVDGKLSQTCYLMALDSCYKRFCEKYEKLEGKQFSISD 240 (459)
T ss_pred CcceEEEEEccCCCceeecccccccCcccchhcccCCCCCceEEcchHHHHHHHHHHHHHHHHHHHHhhcccccCCCHHH
Confidence 99999999888777776788999999999999977788999999999999999999999999987544445788999
Q ss_pred ccEEEecCcchHHHHHHHHhhhhhhhhccCCchhhHHhhhccCCCCCCccccccchhHHHHHHHHHHHHhhhhcCCCccc
Q 012909 231 VDYFVFHSPYNKLVQKSFARLFFNDFLRNASSVDEIAKEKLAPYSTLSDVESYQSRDLEKASQQVAKQLYDLKVQPSTLI 310 (453)
Q Consensus 231 ~d~~v~H~p~~km~~ka~~~l~~~~~~~~~~~~~~~~~~~l~~~l~l~~e~~~~~~~~~k~~~~~~~~~~~~~~~~s~~~ 310 (453)
||++||||||+||++|++++|+++||.+....+.+..++.+.....++.+++|.||+++|.+...+++.|.+|++||+.+
T Consensus 241 ~d~~vfHqP~~km~~ka~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kv~ps~~~ 320 (459)
T PLN02577 241 ADYFVFHAPYNKLVQKSFARLVYNDFQRNASSVDEDAKEKLAPFAGLSSDESYQNRDLEKVSQQVAKPLYDAKVQPTTLI 320 (459)
T ss_pred cCEEEecCCccchhHHHHHHHhhhhhhhccccccchhhhccccccccchhhccccchHHHHHHHhhHHHHHHhhccHhHH
Confidence 99999999999999999999999998854321112224445556678889999999999999999999999999999999
Q ss_pred ccccCccccchHHHHHHHHHhhcCcCCCCCEEEEEEecchhhheeeEEEEecCCCCCchhhhhhcCChHHHhccCccCCH
Q 012909 311 PKQVGNMYTASLYAAFASLLHEKHSSLEGKRVIMFSYGSGLTATMFSLQLQEGHRPFSLSNIVKVMDVPGKLKLRHEFPP 390 (453)
Q Consensus 311 ~~~~GN~~taSl~l~L~sll~~~~~~~~Gd~ill~syGsG~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L~~r~~~~~ 390 (453)
++++|||||||+|++|+++|++....++|+||+|||||||+++++|+++++++..+..+++++.+.+++++|++|++||+
T Consensus 321 ~~~vGN~YTaSlyl~L~SlL~~~~~~~~G~rIg~fSYGSG~~se~fs~~v~~~~~~~~~~~~~~~~~~~~~L~~R~~ls~ 400 (459)
T PLN02577 321 PKQVGNMYTASLYAALASLVHNKHSELAGKRILMFSYGSGLTATMFSLRLHEGQHPFSLSNIAKVMDVSEKLKSRHEVSP 400 (459)
T ss_pred HHhcCcccchHHHHHHHHHHhhccccCCCCEEEEEeecCCccceeEEEEEeCCCccccHHHHHHhccHHHHHhCCccCCH
Confidence 99999999999999999999874335699999999999999999999999995444445788888899999999999999
Q ss_pred HHHHHHHHHHHHhcCCCCCccCCCCCCcCCCcEEEEeeCCCcceEeeeecCcccccccccC
Q 012909 391 EKFVDIMKLMEHRYGAKDFVTSKDSSLLSPGTCYLTEVDSMFRRFYAKKENTSNAATCENG 451 (453)
Q Consensus 391 ~~y~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~~R~Y~~~~~~~~~~~~~~~ 451 (453)
+||+++++.|+..|+..+|.|..+.+.++||+|||++|+++|||+|++++ -+-.+.||
T Consensus 401 ~ey~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~i~~~~~R~Y~~~~---~~~~~~~~ 458 (459)
T PLN02577 401 EKFVETLKLMEHRYGAKDFVPSKDVSLLAPGTYYLTEVDSLYRRFYDRKA---LNGSIANG 458 (459)
T ss_pred HHHHHHHHHHHhhccCcCCCcCCcccccCCCceEEeEEcCCcEEEEEecC---CCCccCCC
Confidence 99999999999999999999999888889999999999998999999987 55666666
No 3
>TIGR01833 HMG-CoA-S_euk 3-hydroxy-3-methylglutaryl-CoA-synthase, eukaryotic clade. Hydroxymethylglutaryl(HMG)-CoA synthase is the first step of isopentenyl pyrophosphate (IPP) biosynthesis via the mevalonate pathway. This pathway is found mainly in eukaryotes, but also in archaea and some bacteria. This model is specific for eukaryotes.
Probab=100.00 E-value=8.6e-91 Score=716.78 Aligned_cols=432 Identities=61% Similarity=0.975 Sum_probs=393.2
Q ss_pred eeEEeEEEEEcCCceechhHHhhhhCCCcCeeeEcccceEEeccCCCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEEcc
Q 012909 8 NVGILALDIYFPPTCVLQEALEVHDGVSKGKYTVGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSE 87 (453)
Q Consensus 8 ~vgI~~i~~y~P~~~v~~~~l~~~~g~~~~k~~~Gig~r~~av~~~~ed~~~la~~Aa~~aL~~agi~~~~Id~li~~t~ 87 (453)
+|||.+|++|+|+++|++++|++.+|++++||++||++++|+|++++||+++||++||+++|++++++|++||+||++|+
T Consensus 1 ~vgI~~ig~y~P~~~v~~~eLa~~~g~~~~k~~~GI~~rr~av~~~~Ed~~tma~~AA~~lL~~a~id~~~Id~Liv~Te 80 (454)
T TIGR01833 1 DVGILALEIYFPSQYVDQAELEKYDGVSAGKYTIGLGQTKMGFCTDREDINSLCLTVVSKLMERYNIDYNQIGRLEVGTE 80 (454)
T ss_pred CcEEEEEEEeCCCeEEcHHHHHHhcCCCHHHheechhheecccCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEECC
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCccHHHHHHHHhcccCCCCeeEEeeCCcChhHHHHHHHHHHHHHhCCCCCCeEEEEEeecc--------------
Q 012909 88 TVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDTA-------------- 153 (453)
Q Consensus 88 s~~~~~~~~a~~l~~~Lgl~G~~~~~~~dv~~aC~gg~~AL~~A~~~v~sg~~~~~~aLVv~~d~~-------------- 153 (453)
|+++.+|+++++|++.||++|.++|++||+++||+|++.||++|.+||+++.+|+++||||++|++
T Consensus 81 S~~d~sps~a~~v~~lL~~lG~~~~~~fDi~~AC~G~t~AL~~A~~~i~s~~~~~~~aLVV~sDia~y~~~~~~~t~GaG 160 (454)
T TIGR01833 81 TIIDKSKSVKTVLMQLFEESGNTDVEGIDTTNACYGGTAALFNAINWIESSSWDGRYALVVAGDIAVYAKGNARPTGGAG 160 (454)
T ss_pred CCCCCCCchHHHHHHHHHhcCCCCceEEeccccchhHHHHHHHHHHHHHcCCcCCCeEEEEEeccccccCCCeeeccccc
Confidence 999999999999999998778899999999999999999999999999999878899999999996
Q ss_pred ceeeeecCCCCceeccCceeeeccccccccccCCCCCCceecCcchHHHHHHHHHHHHHHHHHHHhhh-h----cCCCCc
Q 012909 154 AVAMLIGPDAPIAFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKYFCQKFEKL-E----GRQFSM 228 (453)
Q Consensus 154 AvA~Ll~~~~~l~~~~~~~~~~~~~~~df~~p~~~~~~~~vdG~~s~~~y~~al~~~~~~~~~~~~~~-~----~~~~~~ 228 (453)
|+||||+++|+++++++..++|+.+++|||||...+++|.|||++|+.||+++++.||..|.++.... . +.+..+
T Consensus 161 AvAmLv~~~~~~~~~~~~~~~~~~~~~DF~rP~~~~~~p~vdg~~S~~~Yl~a~~~~y~~y~~~~~~a~~~~~~~~~~~~ 240 (454)
T TIGR01833 161 AVAMLIGPNAPIVFERGLRGSHMQHAYDFYKPDLASEYPVVDGKLSIQCYLSALDRCYKSYCKKIEKQWGKSGGDRKFTL 240 (454)
T ss_pred eEEEEeccCccceecCccceEEEeecccccCCCCCCcccccCCccCHHHHHHHHHHHHHHHHHHHHHhhhhhccccCCCH
Confidence 99999999988888877788999999999999876679999999999999999999999998876421 1 124778
Q ss_pred cCccEEEecCcchHHHHHHHHhhhhhhhhccCCchhhHHhhhccCCCCCCccccccchhHHHHHHHHHHHHhhhhcCCCc
Q 012909 229 LDVDYFVFHSPYNKLVQKSFARLFFNDFLRNASSVDEIAKEKLAPYSTLSDVESYQSRDLEKASQQVAKQLYDLKVQPST 308 (453)
Q Consensus 229 ~d~d~~v~H~p~~km~~ka~~~l~~~~~~~~~~~~~~~~~~~l~~~l~l~~e~~~~~~~~~k~~~~~~~~~~~~~~~~s~ 308 (453)
+|||++|||+||+||++|+|++++++|+...+..+.+..|+.+.+...++.+++|+||++++.|.+++++.|.+|++||+
T Consensus 241 ~dfd~~~fH~P~~km~~ka~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kv~ps~ 320 (454)
T TIGR01833 241 NDFDYMVFHSPYCKLVQKSLARLLYNDFLRNPSSIDTALYEGLEALSTLKLEDTYFDRDLEKAFMKASKELFDKKTKPSL 320 (454)
T ss_pred hHcCEEeccCCcccHHHHHHHHHHHhhhhhccccccchhhcccchhhccccccccchhhHHHHHHhhhhhhHHHhhcchh
Confidence 99999999999999999999999999987654322223356677778899999999999999999999999999999999
Q ss_pred ccccccCccccchHHHHHHHHHhhcCc-CCCCCEEEEEEecchhhheeeEEEEecCCCCC-c-hhhhhhcCChHHHhccC
Q 012909 309 LIPKQVGNMYTASLYAAFASLLHEKHS-SLEGKRVIMFSYGSGLTATMFSLQLQEGHRPF-S-LSNIVKVMDVPGKLKLR 385 (453)
Q Consensus 309 ~~~~~~GN~~taSl~l~L~sll~~~~~-~~~Gd~ill~syGsG~~~~~~~l~~~~~~~~~-~-~~~~~~~~~~~~~L~~r 385 (453)
.+++++|||||||+|++|+++|++... .+.|+||+|||||||+++++|+++++++..++ . ++.+....++.++|++|
T Consensus 321 ~~~~~vGN~YtaSlyl~L~Sll~~~~~~~~~g~ri~~fSYGSG~~se~fs~~v~~~~~~~~~~~~~~~~~~~~~~~L~~R 400 (454)
T TIGR01833 321 LVPNQVGNMYTASLYGCLASLLSSKSAQELAGKRVGMFSYGSGLAASMFSLRVSQDASPGSALDKLIASLSDLKNKLDSR 400 (454)
T ss_pred HHHHhcCchhhhHHHHHHHHHHhhCCccccCCCEEEEEeccCCcceeeEEEEEeCCccccchHHHHHHHHhhHHHHHhcC
Confidence 999999999999999999999987432 56899999999999999999999999942221 1 44555566899999999
Q ss_pred ccCCHHHHHHHHHHHHHhcCCCCCccCCCCCCcCCCcEEEEeeCCCcceEeeee
Q 012909 386 HEFPPEKFVDIMKLMEHRYGAKDFVTSKDSSLLSPGTCYLTEVDSMFRRFYAKK 439 (453)
Q Consensus 386 ~~~~~~~y~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~~R~Y~~~ 439 (453)
+++|++||+++++.|++.|+..+|.|.++.+.++||+|||++|+++|||+|+++
T Consensus 401 ~~~s~~ey~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~i~~~~~R~Y~~~ 454 (454)
T TIGR01833 401 HCVAPEEFEETMELREQAHHKKNFTPQGSIDLLFPGTWYLERVDSKHRRSYARK 454 (454)
T ss_pred ccCCHHHHHHHHHhhhhhcccccccccccccccCCCcEEEeeecCCceEEeccC
Confidence 999999999999999999999999999998889999999999999999999975
No 4
>COG3425 PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipid metabolism]
Probab=100.00 E-value=6.1e-77 Score=588.54 Aligned_cols=361 Identities=34% Similarity=0.515 Sum_probs=335.0
Q ss_pred ceeEEeEEEEEcCCceechhHHhhhhCCCcCeeeEcccceEEeccCCCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEEc
Q 012909 7 KNVGILALDIYFPPTCVLQEALEVHDGVSKGKYTVGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGS 86 (453)
Q Consensus 7 ~~vgI~~i~~y~P~~~v~~~~l~~~~g~~~~k~~~Gig~r~~av~~~~ed~~~la~~Aa~~aL~~agi~~~~Id~li~~t 86 (453)
|+|||.++++|+|.++|+++||++.+|++++|++.|+|+.+++|++.+||++|||++||+++|+++++||++|++|+|||
T Consensus 1 ~~iGI~~~g~y~p~~~i~~~ela~~~g~d~~k~~~gl~~~e~sv~~~~ED~vTmaveAA~~~l~r~~~D~~~Ig~v~vgT 80 (377)
T COG3425 1 MMIGIVGIGAYIPRYRIKLEELARAWGVDPEKIKKGLGVEEKSVPPWDEDAVTMAVEAARNALKRADIDPSKIGAVIVGS 80 (377)
T ss_pred CccccceEEEeccceEeeHHHHHhhcCCChHHhhhccccccccCCCCchhHHHHHHHHHHHHHhccCCCHHHCceEEEec
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCccHHHHHHHHhcccCCCCeeEEeeCCcChhHHHHHHHHHHHHHhCCCCCCeEEEEEeecc-------------
Q 012909 87 ETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDTA------------- 153 (453)
Q Consensus 87 ~s~~~~~~~~a~~l~~~Lgl~G~~~~~~~dv~~aC~gg~~AL~~A~~~v~sg~~~~~~aLVv~~d~~------------- 153 (453)
||++|.+|+++++|+++||+ +++++++|+++||++|++||++|.+||.+|.+ +++|||++|++
T Consensus 81 ES~~d~~K~~at~v~~~lg~--~~~~~~~d~~~AC~agT~aL~~a~~~v~s~~~--~~~LvI~sD~a~~~~~~~~E~t~G 156 (377)
T COG3425 81 ESGPDAVKPTATIVAEALGL--NPSARAADVEFACYAGTAALQAAIGWVESGMI--SYGLVIGADTAQYAPGDALEYTAG 156 (377)
T ss_pred CCCcccccchHHHHHHHhCC--CCceehhhHHHHHHHHHHHHHHHHHHHHcCCc--cceEEEeehhhccCCCcccCccCC
Confidence 99999999999999999999 89999999999999999999999999999977 89999999998
Q ss_pred --ceeeeecCCCCceeccCceeeeccccccccccCCCCCCceecCcchHHHHHHHHHHHHHHHHHHHhhhhcCCCCccCc
Q 012909 154 --AVAMLIGPDAPIAFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKYFCQKFEKLEGRQFSMLDV 231 (453)
Q Consensus 154 --AvA~Ll~~~~~l~~~~~~~~~~~~~~~df~~p~~~~~~~~vdG~~s~~~y~~al~~~~~~~~~~~~~~~~~~~~~~d~ 231 (453)
|+||||+++++++.+....++|+.+.+|||||.+. .||.+||++|..+|+.++.++++.|.++.+ ++++||
T Consensus 157 AGavA~lIg~n~~~~a~~~~~~syt~d~~DFwRp~~~-~yp~~dg~~s~~~Y~~~~~~a~~~~~~k~g------ls~~df 229 (377)
T COG3425 157 AGAVAFLIGKNPPIVAEFEGTGSYTTDTPDFWRPDGQ-PYPYVDGRFSEPAYFKHVENAAKGYMEKTG------LSPDDF 229 (377)
T ss_pred CceEEEEEccCCCeEEEecCceEEecCCCcccccCCC-cccccCceecHHHHHHHHHHHHHHHHHHhC------CChhhh
Confidence 99999999977777777889999999999999954 899999999999999999999999999885 889999
Q ss_pred cEEEecCcchHHHHHHHHhhhhhhhhccCCchhhHHhhhccCCCCCCccccccchhHHHHHHHHHHHHhhhhcCCCcccc
Q 012909 232 DYFVFHSPYNKLVQKSFARLFFNDFLRNASSVDEIAKEKLAPYSTLSDVESYQSRDLEKASQQVAKQLYDLKVQPSTLIP 311 (453)
Q Consensus 232 d~~v~H~p~~km~~ka~~~l~~~~~~~~~~~~~~~~~~~l~~~l~l~~e~~~~~~~~~k~~~~~~~~~~~~~~~~s~~~~ 311 (453)
|++|||+||+||++|+++.++++ .+++.|++.++
T Consensus 230 dy~vfH~P~~k~~~ka~k~l~~~----------------------------------------------~e~v~~~l~~~ 263 (377)
T COG3425 230 DYIVFHQPNGKFPKKAAKSLGFK----------------------------------------------EEQVKPGLVYP 263 (377)
T ss_pred CeEEecCCCCchHHHHHHHhCcc----------------------------------------------HhhcCccchhh
Confidence 99999999999999998776521 25789999999
Q ss_pred cccCccccchHHHHHHHHHhhcCcCCCCCEEEEEEecchhhheeeEEEEecCCCCCchhhhhhcCChHHHhccCccCCHH
Q 012909 312 KQVGNMYTASLYAAFASLLHEKHSSLEGKRVIMFSYGSGLTATMFSLQLQEGHRPFSLSNIVKVMDVPGKLKLRHEFPPE 391 (453)
Q Consensus 312 ~~~GN~~taSl~l~L~sll~~~~~~~~Gd~ill~syGsG~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L~~r~~~~~~ 391 (453)
+++||+||||+|++|+++|++. . ++|||||++|||||+.+++|++++++ ++++++++..+..+|.+|+++|+.
T Consensus 264 ~~vGN~YtgS~~L~Las~L~~a-~-~~G~rIl~~SYGSGa~s~~fs~~v~~-----~~~~~~~~~~~~~~l~~R~~ls~~ 336 (377)
T COG3425 264 QRIGNTYTGSLLLGLASLLDNA-K-LPGDRILLFSYGSGAGSEAFSITVTD-----GIEERRKKLAPTVLLEQRNRLSYI 336 (377)
T ss_pred hhcCcccchhHHHHHHHHHhhc-C-CCCCEEEEEeeCCCcceeEEEEEecc-----cHHHHhhhcchHHHHHhhccCCHH
Confidence 9999999999999999999995 3 79999999999999999999999999 899999899999999999999999
Q ss_pred HHHHHHHHHHHhcCCCCCccCCCCCCcCCCcEEEEeeCCCcceEeee
Q 012909 392 KFVDIMKLMEHRYGAKDFVTSKDSSLLSPGTCYLTEVDSMFRRFYAK 438 (453)
Q Consensus 392 ~y~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~~R~Y~~ 438 (453)
+|+.+++.|.+.....+..+ ...+.|||..|++ +.|.|.+
T Consensus 337 dYe~~~~~~~~~~~~~~~~~------~~~~~~~l~~i~~-~~R~y~~ 376 (377)
T COG3425 337 DYELYFKRRKKIRLGKDNEF------YDSGDYYLEEIDD-HFRRYRY 376 (377)
T ss_pred HHHHHHhhhccccccccccc------ccCCceEEeeccC-CceeEee
Confidence 99999998766555444444 4567899999999 6666754
No 5
>TIGR01835 HMG-CoA-S_prok 3-hydroxy-3-methylglutaryl CoA synthase, prokaryotic clade. This clade of hydroxymethylglutaryl-CoA (HMG-CoA) synthases is found in a limited spectrum of mostly gram-positive bacteria which make isopentenyl pyrophosphate (IPP) via the mevalonate pathway. This pathway is found primarily in eukaryotes and archaea, but the bacterial homologs are distinct, having aparrently diverged after being laterally transferred from an early eukaryote. HMG-CoA synthase is the first step in the pathway and joins acetyl-CoA with acetoacetyl-CoA with the release of one molecule of CoA. The Borellia sequence may have resulted from a separate lateral transfer event.
Probab=100.00 E-value=2.2e-67 Score=538.86 Aligned_cols=363 Identities=28% Similarity=0.426 Sum_probs=319.2
Q ss_pred eEEeEEEEEcCCceechhHHhhhhCCCcCeeeEcccceEEeccCCCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEEccc
Q 012909 9 VGILALDIYFPPTCVLQEALEVHDGVSKGKYTVGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSET 88 (453)
Q Consensus 9 vgI~~i~~y~P~~~v~~~~l~~~~g~~~~k~~~Gig~r~~av~~~~ed~~~la~~Aa~~aL~~agi~~~~Id~li~~t~s 88 (453)
|||.+|++|+|+++|++++|++.+|++++||..|+|++++++++++||+++|+++|++++|+++ +|++||+|+++|+|
T Consensus 1 iGI~~i~~y~P~~~v~~~ela~~~g~~~~~~~~g~G~~~~~~~~~~ed~~~la~~Aa~~aL~~a--~~~~Id~li~~t~s 78 (379)
T TIGR01835 1 IGIDKISFFTPQNYLDMTALAEARGVDPEKFHIGIGQKKMAVPPIDEDIVTMAASAAKPILDRN--DKQKIDMVIFGTES 78 (379)
T ss_pred CCEeEEEEECCCEEeeHHHHHHHhCCCHHHHHhhcCceEEeeCCCCCCHHHHHHHHHHHHHHhC--CHhhCCEEEEEeCC
Confidence 6999999999999999999999999999999999999999999999999999999999999998 89999999999999
Q ss_pred CCCCCccHHHHHHHHhcccCCCCeeEEeeCCcChhHHHHHHHHHHHHHhCCCCCCeEEEEEeecc---------------
Q 012909 89 VIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDTA--------------- 153 (453)
Q Consensus 89 ~~~~~~~~a~~l~~~Lgl~G~~~~~~~dv~~aC~gg~~AL~~A~~~v~sg~~~~~~aLVv~~d~~--------------- 153 (453)
+++.+|+.+.+|++.||+ +++++++|++++|+|++.||++|.+||++|.+ ++||||++|++
T Consensus 79 ~~~~~~s~a~~v~~~Lgl--~~~~~~~dv~~aC~gg~~aL~~A~~~i~s~~~--~~aLVv~~D~a~~~~~~~~~~~~GdG 154 (379)
T TIGR01835 79 GIDQSKAAAVYVHGLLGL--QPFCRSFELKQACYGATAALQMAKGHVALSPD--RKVLVIASDIAKYGLESPGEPTQGAG 154 (379)
T ss_pred CCCCCCCHHHHHHHHhCC--CCCceEEEeccccHHHHHHHHHHHHHHHcCCC--CeEEEEEeehhhcccCCCCCccccCc
Confidence 999999999999999999 56799999999999999999999999999954 99999999996
Q ss_pred ceeeeecCCCCc-eeccCceeeeccccccccccCCCCCCceecCcchHHHHHHHHHHHHHHHHHHHhhhhcCCCCccCcc
Q 012909 154 AVAMLIGPDAPI-AFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKYFCQKFEKLEGRQFSMLDVD 232 (453)
Q Consensus 154 AvA~Ll~~~~~l-~~~~~~~~~~~~~~~df~~p~~~~~~~~vdG~~s~~~y~~al~~~~~~~~~~~~~~~~~~~~~~d~d 232 (453)
|+||||++++++ .++. ....++.+.+|||+|.+ ..+|.++|+++..+|++.+..+++.++++. +++++|||
T Consensus 155 A~A~Ll~~~~~i~~~~~-~~~~~t~~~~df~~p~~-~~~~~v~g~~s~~~y~~~~~~~~~~~l~~~------g~~~~did 226 (379)
T TIGR01835 155 AVAMLVSADPKLLAINE-DSVLYTDDIMDFWRPNY-STTALVDGQYSNEQYLNAFENAWNDYAKRT------GLSLADFA 226 (379)
T ss_pred cEEEEEecCCCeeEEec-cceeeecCCCCccCCCC-CCceeECcHHHHHHHHHHHHHHHHHHHHHh------CCCHHHcC
Confidence 999999999764 3443 24477888899999984 567999999999999999999999998876 48899999
Q ss_pred EEEecCcchHHHHHHHHhhhhhhhhccCCchhhHHhhhccCCCCCCccccccchhHHHHHHHHHHHHhhhhcCCCccccc
Q 012909 233 YFVFHSPYNKLVQKSFARLFFNDFLRNASSVDEIAKEKLAPYSTLSDVESYQSRDLEKASQQVAKQLYDLKVQPSTLIPK 312 (453)
Q Consensus 233 ~~v~H~p~~km~~ka~~~l~~~~~~~~~~~~~~~~~~~l~~~l~l~~e~~~~~~~~~k~~~~~~~~~~~~~~~~s~~~~~ 312 (453)
+++|||||++|+.|++++++ +.++++.+ +.+.+.+++|+.+.+
T Consensus 227 ~~i~H~p~~~~~~k~~~~~l--------------------~~~~~~~~-----------------~~~~~~~~~s~~~~~ 269 (379)
T TIGR01835 227 AFCFHVPFTKMGLKALRHIL--------------------KKNYEDED-----------------ESVQNAYLESIIYNR 269 (379)
T ss_pred EEEECCCCCcHHHHHHHHHH--------------------hhcccccH-----------------HHHHHHhhhhhhhhh
Confidence 99999999999999887654 12233321 223344567888889
Q ss_pred ccCccccchHHHHHHHHHhhcCcCCCCCEEEEEEecchhhheeeEEEEecCCCCCchhhhhhcCChHHHhccCccCCHHH
Q 012909 313 QVGNMYTASLYAAFASLLHEKHSSLEGKRVIMFSYGSGLTATMFSLQLQEGHRPFSLSNIVKVMDVPGKLKLRHEFPPEK 392 (453)
Q Consensus 313 ~~GN~~taSl~l~L~sll~~~~~~~~Gd~ill~syGsG~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L~~r~~~~~~~ 392 (453)
++|||||||+|++|++++++.+++++||+|+|+|||||+++++|++++.+ ++++...+.++.++|++|+.+++++
T Consensus 270 ~~GN~~sas~~l~L~~~l~~~~~~~~Gd~ill~s~GsG~~ae~~~~~~~~-----~~~~~~~~~~~~~~l~~r~~~~~~~ 344 (379)
T TIGR01835 270 EVGNLYTGSLYLGLASLLENAFEDTTGDKIGLFSYGSGAVAEFFSGTLVA-----GYRDHLKKERHLALLKNRTNLSYAE 344 (379)
T ss_pred hcCchHhHHHHHHHHHHHHhcccCCCCCEEEEEEecCCcceeeEEEEEcc-----cHHHHHhcccHHHHHhCCccCCHHH
Confidence 99999999999999999997326789999999999999999999999998 8988888889999999999999999
Q ss_pred HHHHHHHHHHhcCCCCCccCCCCCCcCCCcEEEEeeCCCcceEe
Q 012909 393 FVDIMKLMEHRYGAKDFVTSKDSSLLSPGTCYLTEVDSMFRRFY 436 (453)
Q Consensus 393 y~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~~R~Y 436 (453)
|+++++.+.. +..+.....+|+|||++|++ |+|+|
T Consensus 345 y~~~~~~~~~--------~~~~~~~~~~~~~~l~~~~~-~~r~y 379 (379)
T TIGR01835 345 YEALFEETLP--------TDGDQPGEDRGFFRLAGIND-HKRIY 379 (379)
T ss_pred HHHHHHhccC--------CCCCcccCCCCcEEEEEecc-cEeeC
Confidence 9999987543 11113345688999999999 78888
No 6
>PF08540 HMG_CoA_synt_C: Hydroxymethylglutaryl-coenzyme A synthase C terminal; InterPro: IPR013746 Synonym(s): 3-hydroxy-3-methylglutaryl-coenzyme A synthase, HMG-CoA synthase. Hydroxymethylglutaryl-CoA synthase (2.3.3.10 from EC) catalyses the condensation of acetyl-CoA with acetoacetyl-CoA to produce HMG-CoA and CoA, the second reaction in the mevalonate-dependent isoprenoid biosynthesis pathway. HMG-CoA synthase contains an important catalytic cysteine residue that acts as a nucleophile in the first step of the reaction: the acetylation of the enzyme by acetyl-CoA (its first substrate) to produce an acetyl-enzyme thioester, releasing the reduced coenzyme A. The subsequent nucleophilic attack on acetoacetyl-CoA (its second substrate) leads to the formation of HMG-CoA []. HMG-CoA synthase occurs in eukaryotes, archaea and certain bacteria []. In vertebrates, there are two isozymes located in different subcellular compartments: a cytosolic form that is the starting point of the mevalonate pathway (leads to cholesterol and other sterolic and isoprenoid compounds), and a mitochondrial form responsible for ketone body biosynthesis. HMG-CoA is also found in other eukaryotes such as insects, plants and fungi []. In bacteria, isoprenoid precursors are generally synthesised via an alternative, non-mevalonate pathway, however a number of Gram-positive pathogens utilise a mevalonate pathway involving HMG-CoA synthase that is parallel to that found in eukaryotes [, ]. This entry represents the C-terminal domain of HMG-CoA synthase enzymes from both eukaryotes and prokaryotes.; GO: 0004421 hydroxymethylglutaryl-CoA synthase activity, 0008299 isoprenoid biosynthetic process; PDB: 1TXT_D 1TVZ_A 1X9E_B 2HDB_B 3V4X_A 3V4N_C 2P8U_A 2FA0_A 2F9A_A 2F82_A ....
Probab=100.00 E-value=2.1e-62 Score=476.06 Aligned_cols=270 Identities=55% Similarity=0.866 Sum_probs=225.3
Q ss_pred ceeccCceeeeccccccccccCCCCCCceecCcchHHHHHHHHHHHHHHHHHHHhhhh---cCCCCccCccEEEecCcch
Q 012909 165 IAFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKYFCQKFEKLE---GRQFSMLDVDYFVFHSPYN 241 (453)
Q Consensus 165 l~~~~~~~~~~~~~~~df~~p~~~~~~~~vdG~~s~~~y~~al~~~~~~~~~~~~~~~---~~~~~~~d~d~~v~H~p~~ 241 (453)
|++|+++.++||.|+||||||+..++||+|||++|++||+++++.||+.|+++..+.. ..+..+++||+++||.||+
T Consensus 1 iv~d~~~~~~~m~~~yDFyKP~~~seyP~VDG~~S~~~Yl~ald~~y~~y~~k~~~~~~~~~~~~~l~~~d~~~fH~Py~ 80 (282)
T PF08540_consen 1 IVFDRGLRGSHMEHVYDFYKPDLSSEYPVVDGKLSIQCYLDALDKCYKRYKEKVEKLANRGNKGTSLDDFDYVCFHSPYC 80 (282)
T ss_dssp EEEETTEEEEEE----SEE-BTTT-SS-EE-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSST--GGG-SEEEE--SSH
T ss_pred CcccCCCceeehhhchhccCCCCCCCCcEEchHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCCCccccceEEEecCch
Confidence 4688889999999999999999889999999999999999999999999999975321 3468889999999999999
Q ss_pred HHHHHHHHhhhhhhhhccCCch-hhHHhhhccCCCCCCccccccchhHHHHHHHHHHHHhhhhcCCCcccccccCccccc
Q 012909 242 KLVQKSFARLFFNDFLRNASSV-DEIAKEKLAPYSTLSDVESYQSRDLEKASQQVAKQLYDLKVQPSTLIPKQVGNMYTA 320 (453)
Q Consensus 242 km~~ka~~~l~~~~~~~~~~~~-~~~~~~~l~~~l~l~~e~~~~~~~~~k~~~~~~~~~~~~~~~~s~~~~~~~GN~~ta 320 (453)
||++|++++++++|+...+..+ .+...+.+.+..+++.+++|+||+++|.+.+.+++.|++|++||+.+++++||||||
T Consensus 81 klv~Ka~~rl~~~D~~~~~~~~~~~~~~~~l~~~~~~~~~~s~~dr~lek~~~~~s~~~~~~kv~psl~~~~~vGN~YTa 160 (282)
T PF08540_consen 81 KLVQKAFARLLYNDFLRNPSSEEFEEIDAELAPFRDLPLEESYFDRDLEKAFMKASKEDFERKVEPSLLYSRQVGNMYTA 160 (282)
T ss_dssp HHHHHHHHHHHHHHHHHTTTCHHHHHHHCCHGGGTT--GGGHCTHHHHHHHHHHHHHHHHHHHCHHHTHHHHHHB--GGG
T ss_pred HHHHHHHHHHHHhhhhhccccccccccchhhhhhccCCcccccccHHHHHHHHHHHHHHHHHHHhHHHHHHHHcCceehH
Confidence 9999999999999998766652 223445566677889999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHh-hcCcCCCCCEEEEEEecchhhheeeEEEEecCCCCCchhh-------hhhcCChHHHhccCccCCHHH
Q 012909 321 SLYAAFASLLH-EKHSSLEGKRVIMFSYGSGLTATMFSLQLQEGHRPFSLSN-------IVKVMDVPGKLKLRHEFPPEK 392 (453)
Q Consensus 321 Sl~l~L~sll~-~~~~~~~Gd~ill~syGsG~~~~~~~l~~~~~~~~~~~~~-------~~~~~~~~~~L~~r~~~~~~~ 392 (453)
|+|++|+|+|. .....+.|+||+|||||||+++++|++++++ ++++ +.+.+++.+||++|+++|++|
T Consensus 161 Sly~~L~SlL~~~~~~~l~GkrI~~FSYGSG~~s~~fs~~v~~-----~~~~~~~~~~~i~~~~dl~~rL~~R~~~s~ee 235 (282)
T PF08540_consen 161 SLYLGLASLLSSAEADDLAGKRIGMFSYGSGLASEFFSGRVQP-----GAEEGSLLNRLIAKALDLKERLDARTKLSPEE 235 (282)
T ss_dssp HHHHHHHHHHHHHHSCHHTT-EEEEEEEETTTEEEEEEEEE-T-----TGGGTSHHHHHHHHHHCHHHHHHTSEEE-HHH
T ss_pred HHHHHHHHHhhccCccccCCCEEEEEEecCCcceeEEEEEEeC-----CccccchhhhHHHhhhhHHHHHhcCcCCCHHH
Confidence 99999999993 2234569999999999999999999999999 5555 667789999999999999999
Q ss_pred HHHHHHHHHHhcCCCCCccCCCCCCcCCCcEEEEeeCCCcceEeeee
Q 012909 393 FVDIMKLMEHRYGAKDFVTSKDSSLLSPGTCYLTEVDSMFRRFYAKK 439 (453)
Q Consensus 393 y~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~~R~Y~~~ 439 (453)
|+++++.||+.|+..+|.|.++.+.++||+|||++||++|||+|++|
T Consensus 236 ye~~~~~re~~~~~~~y~p~~~~~~l~~GtyyL~~VD~~~RR~Y~rk 282 (282)
T PF08540_consen 236 YEEILKLREKTYGAKDYTPSGDISSLFPGTYYLTRVDDKHRRTYARK 282 (282)
T ss_dssp HHHHHHHHHHHTTHTSBETTSTGGGSGTTSEEEEEEETTSEEEEEE-
T ss_pred HHHHHHhhhhhccccCCCCCCcccccCCCCEEEcccCCcceEEeccC
Confidence 99999999999999999999999999999999999999999999986
No 7
>TIGR00748 HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase, putative. Thus, although there is no experimental evidence supporting this name, the bioinformatics-based conclusion appears to be sound.
Probab=100.00 E-value=8.4e-48 Score=389.78 Aligned_cols=322 Identities=25% Similarity=0.392 Sum_probs=259.5
Q ss_pred eeEEeEEEEEcCCceechhHHhhhhCCCcCeeeEcccceEEeccCCCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEEcc
Q 012909 8 NVGILALDIYFPPTCVLQEALEVHDGVSKGKYTVGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSE 87 (453)
Q Consensus 8 ~vgI~~i~~y~P~~~v~~~~l~~~~g~~~~k~~~Gig~r~~av~~~~ed~~~la~~Aa~~aL~~agi~~~~Id~li~~t~ 87 (453)
+++|.+++.|+|+++|+++++++.++.+++++..++|.+++++++++|++.+|+++|+++||+++|++|++||.|+++|+
T Consensus 1 ~~~I~g~g~~lP~~~v~n~~l~~~~~~~~~~i~~~~Gi~~r~v~~~~~~~~~la~~Aa~~aL~~agl~~~dID~li~~s~ 80 (345)
T TIGR00748 1 MAGIVGYGAYIPMYRIKVEEIARVWGKDPESISNGLPVEEKAVPGLDEDTATIGVEAARNALKRAKIDPKDIGAVYVGSE 80 (345)
T ss_pred CccEEEEEEeCCCeeecHHHHHHHhCCCHhHeeeccceeeeecCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEec
Confidence 47999999999999999999999999999999666666666677899999999999999999999999999999999999
Q ss_pred cCCCCCccHHHHHHHHhcccCCCCeeEEeeCCcChhHHHHHHHHHHHHHhCCCCCCeEEEEEeecc--------------
Q 012909 88 TVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDTA-------------- 153 (453)
Q Consensus 88 s~~~~~~~~a~~l~~~Lgl~G~~~~~~~dv~~aC~gg~~AL~~A~~~v~sg~~~~~~aLVv~~d~~-------------- 153 (453)
++++..|+.+..+++.||+ ..++.++|+.++|+|++.||++|..+|++|.. ++||||++|++
T Consensus 81 ~~~~~~p~~a~~v~~~LGl--~~~~~~~dv~~aC~g~~~al~~A~~~i~sg~~--~~vLVv~~d~~~~~~~~~~~~~~GD 156 (345)
T TIGR00748 81 SHPYAVKPTATIVAEAIGA--TPDLTAADLEFACKAGTAGIQACMGLVASGMI--KYGLAIGADTAQGAPGDALEYTAGA 156 (345)
T ss_pred CCCccccchHHHHHHHcCC--CCCceEEEHHHhHHHHHHHHHHHHHHHHcCCC--CEEEEEEEeecccCCCccCcccCCC
Confidence 9988889999999999998 55789999999999999999999999999966 99999999975
Q ss_pred -ceeeeecCCCCc-eeccCceeeeccccccccccCCCCCCceecCcchH-HHHHHHHHHHHHHHHHHHhhhhcCCCCccC
Q 012909 154 -AVAMLIGPDAPI-AFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQ-TCYLMALDSCYKYFCQKFEKLEGRQFSMLD 230 (453)
Q Consensus 154 -AvA~Ll~~~~~l-~~~~~~~~~~~~~~~df~~p~~~~~~~~vdG~~s~-~~y~~al~~~~~~~~~~~~~~~~~~~~~~d 230 (453)
|+|+||++.+.. .+.. . ..+..+..|+|++. +..++...+++.. ..+.+.+..+.+.++++ .+++++|
T Consensus 157 GAaA~vl~~~~~~~~~~~-~-~~~~~d~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~------~gl~~~d 227 (345)
T TIGR00748 157 GGAAYIIGEKNTVAYFEG-T-YSYTTDTPDFWRRE-GEPYPRHGGRFTGEPAYFHHVVTAAKGLMEK------LGLTPED 227 (345)
T ss_pred ceEEEEEccCCcceEeec-c-cceecccccccccC-CCcCCCcCCeecChHHHHHHHHHHHHHHHHH------cCCCHHH
Confidence 789999977542 2221 1 12223345777764 2233444443322 12333333444555444 4699999
Q ss_pred ccEEEecCcchHHHHHHHHhhhhhhhhccCCchhhHHhhhccCCCCCCccccccchhHHHHHHHHHHHHhhhhcCCCccc
Q 012909 231 VDYFVFHSPYNKLVQKSFARLFFNDFLRNASSVDEIAKEKLAPYSTLSDVESYQSRDLEKASQQVAKQLYDLKVQPSTLI 310 (453)
Q Consensus 231 ~d~~v~H~p~~km~~ka~~~l~~~~~~~~~~~~~~~~~~~l~~~l~l~~e~~~~~~~~~k~~~~~~~~~~~~~~~~s~~~ 310 (453)
||+|++|||+.+|++.. .+.+|+++++ . ..++ .
T Consensus 228 id~~i~Hq~~~~~~~~~------------------------~~~lgl~~ek---------~-------------~~~~-~ 260 (345)
T TIGR00748 228 FDYAVFHQPNGKFYLVA------------------------ARMLGFPKEQ---------V-------------KPGL-L 260 (345)
T ss_pred cCEEEeCCCChHHHHHH------------------------HHHcCCCHHH---------e-------------eccc-c
Confidence 99999999999998773 3456777762 2 1222 1
Q ss_pred ccccCccccchHHHHHHHHHhhcCcCCCCCEEEEEEecchhhheeeEEEEecCCCCCchhhhhh-cCChHHHhccCccCC
Q 012909 311 PKQVGNMYTASLYAAFASLLHEKHSSLEGKRVIMFSYGSGLTATMFSLQLQEGHRPFSLSNIVK-VMDVPGKLKLRHEFP 389 (453)
Q Consensus 311 ~~~~GN~~taSl~l~L~sll~~~~~~~~Gd~ill~syGsG~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~L~~r~~~~ 389 (453)
.+++|||+|||+|++|.++++. +++||+|+|++||+|++|++++++|++ .++..++ +-++.+.|++|+.++
T Consensus 261 ~~~~GNt~sAsipl~L~~~~~~---~~~Gd~vll~~~G~G~s~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~ 332 (345)
T TIGR00748 261 TPRIGNTYSGATPVGLSAVLDI---AEPGDRILAVSYGSGAGSDAFSIVVQD-----AIEEKRDLAPKVADYIKRKKYID 332 (345)
T ss_pred ccccCchhhhHHHHHHHHHHHh---cCCCCEEEEEEecCCcceeEEEEEEch-----hHHHHhhhhhhHHHHHhcCccCC
Confidence 3799999999999999999864 689999999999999999999999998 7887763 237999999999999
Q ss_pred HHHHHHHH
Q 012909 390 PEKFVDIM 397 (453)
Q Consensus 390 ~~~y~~~~ 397 (453)
+++|+++.
T Consensus 333 ~~~y~~~~ 340 (345)
T TIGR00748 333 YALYAKFR 340 (345)
T ss_pred HHHHHHHh
Confidence 99999875
No 8
>PRK04262 hypothetical protein; Provisional
Probab=100.00 E-value=7e-48 Score=390.96 Aligned_cols=323 Identities=25% Similarity=0.389 Sum_probs=260.8
Q ss_pred ceeEEeEEEEEcCCceechhHHhhhhCCCcCeeeEcccceEEeccCCCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEEc
Q 012909 7 KNVGILALDIYFPPTCVLQEALEVHDGVSKGKYTVGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGS 86 (453)
Q Consensus 7 ~~vgI~~i~~y~P~~~v~~~~l~~~~g~~~~k~~~Gig~r~~av~~~~ed~~~la~~Aa~~aL~~agi~~~~Id~li~~t 86 (453)
|+|+|.+++.|+|+++|+++++++.++.+++|+...+|.+++.+++++++..+|+++|++++|+++|++|++||.|+++|
T Consensus 1 ~~v~I~~~g~ylP~~~v~~~el~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s 80 (347)
T PRK04262 1 MMVGIVGYGAYIPRYRIKVEEIARVWGDDPEAIKRGLGVEEKSVPGPDEDTATIAVEAARNALKRAGIDPKEIGAVYVGS 80 (347)
T ss_pred CceeEEEEEEeCCCEEecHHHHHHHhCcCHHHHhhccCeeeeecCCCCcCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEe
Confidence 67999999999999999999999999999998854444444456688999999999999999999999999999999999
Q ss_pred ccCCCCCccHHHHHHHHhcccCCCCeeEEeeCCcChhHHHHHHHHHHHHHhCCCCCCeEEEEEeecc-------------
Q 012909 87 ETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDTA------------- 153 (453)
Q Consensus 87 ~s~~~~~~~~a~~l~~~Lgl~G~~~~~~~dv~~aC~gg~~AL~~A~~~v~sg~~~~~~aLVv~~d~~------------- 153 (453)
+++++..|+.+.+|++.||+ +++++++++.++|+|++.||+.|..+|++|.. ++||||++|+.
T Consensus 81 ~~~~~~~p~~a~~v~~~Lgl--~~~~~~~dv~~~C~~~~~aL~~A~~~i~sg~~--~~aLVv~~e~~~~~~~~~~~~~~G 156 (347)
T PRK04262 81 ESHPYAVKPTATIVAEALGA--TPDLTAADLEFACKAGTAALQAAMGLVKSGMI--KYALAIGADTAQGAPGDALEYTAA 156 (347)
T ss_pred cCCCcccccHHHHHHHHcCC--CCCceEEEHHHhHHHHHHHHHHHHHHHHcCCC--CEEEEEEEeeeccCCCCCCCCcCC
Confidence 99988889999999999998 55688999999999999999999999999954 99999999974
Q ss_pred --ceeeeecCCCCc-eeccCceeeeccccccccccCCCCCCceecCcchH-HHHHHHHHHHHHHHHHHHhhhhcCCCCcc
Q 012909 154 --AVAMLIGPDAPI-AFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQ-TCYLMALDSCYKYFCQKFEKLEGRQFSML 229 (453)
Q Consensus 154 --AvA~Ll~~~~~l-~~~~~~~~~~~~~~~df~~p~~~~~~~~vdG~~s~-~~y~~al~~~~~~~~~~~~~~~~~~~~~~ 229 (453)
|+|+||++++.. .+.. . .++..+..|+|++. +..++.....++. ..|.+.+..+++.++++. +++.+
T Consensus 157 DGA~A~ll~~~~~~~~i~~-~-~~~~~d~~d~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~------gl~~~ 227 (347)
T PRK04262 157 AGGAAFIIGKEEVIAEIEA-T-YSYTTDTPDFWRRE-GEPYPRHGGRFTGEPAYFKHIISAAKGLMEKL------GLKPS 227 (347)
T ss_pred CCcEEEEEecCcccceeec-c-ccccccchhhcCCC-CCcCCCcCceecchHHHHHHHHHHHHHHHHHh------CcCHH
Confidence 889999876532 1211 1 12334556788754 2223332233322 146666666776666655 58899
Q ss_pred CccEEEecCcchHHHHHHHHhhhhhhhhccCCchhhHHhhhccCCCCCCccccccchhHHHHHHHHHHHHhhhhcCCCcc
Q 012909 230 DVDYFVFHSPYNKLVQKSFARLFFNDFLRNASSVDEIAKEKLAPYSTLSDVESYQSRDLEKASQQVAKQLYDLKVQPSTL 309 (453)
Q Consensus 230 d~d~~v~H~p~~km~~ka~~~l~~~~~~~~~~~~~~~~~~~l~~~l~l~~e~~~~~~~~~k~~~~~~~~~~~~~~~~s~~ 309 (453)
|||+|+|||++.+|++. +.+.+++|.++ .+ .++
T Consensus 228 dId~~v~Hq~n~~~~~~------------------------~~~~Lgl~~ek---------~~-------------~~~- 260 (347)
T PRK04262 228 DYDYAVFHQPNGKFPLR------------------------VAKMLGFTKEQ---------VK-------------PGL- 260 (347)
T ss_pred HhceeecCCCchHHHHH------------------------HHHHcCCCHHH---------hh-------------ccc-
Confidence 99999999999999987 34456788762 22 222
Q ss_pred cccccCccccchHHHHHHHHHhhcCcCCCCCEEEEEEecchhhheeeEEEEecCCCCCchhhhh-hcCChHHHhccCccC
Q 012909 310 IPKQVGNMYTASLYAAFASLLHEKHSSLEGKRVIMFSYGSGLTATMFSLQLQEGHRPFSLSNIV-KVMDVPGKLKLRHEF 388 (453)
Q Consensus 310 ~~~~~GN~~taSl~l~L~sll~~~~~~~~Gd~ill~syGsG~~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~L~~r~~~ 388 (453)
+.+++|||+|||+|++|.++++. +++||+|+|++||+|+++++++++|++ .+++.+ ...++.+.|++|+.+
T Consensus 261 ~~~~~GNt~sAsi~~~L~~~~~~---~~~Gd~vll~~~G~G~~~~~~~~~~~~-----~~~~~~~~~~~~~~~l~~~~~~ 332 (347)
T PRK04262 261 LTPYIGNTYSGSALLGLAAVLDV---AKPGDRILVVSFGSGAGSDAFSITVTD-----AIEEKRDLAPTVEDYLERKKYI 332 (347)
T ss_pred hhhhhCChHHHHHHHHHHHHHHh---CCCCCEEEEEecCCCcceeeEEEEech-----hHHHhhhccccHHHHHhCCccC
Confidence 23899999999999999999974 579999999999999999999999998 677664 234799999999999
Q ss_pred CHHHHHHHH
Q 012909 389 PPEKFVDIM 397 (453)
Q Consensus 389 ~~~~y~~~~ 397 (453)
++++|+++.
T Consensus 333 ~~~~y~~~~ 341 (347)
T PRK04262 333 DYAVYAKYR 341 (347)
T ss_pred CHHHHHHHh
Confidence 999999874
No 9
>COG0332 FabH 3-oxoacyl-[acyl-carrier-protein]
Probab=100.00 E-value=2.6e-47 Score=376.68 Aligned_cols=289 Identities=22% Similarity=0.254 Sum_probs=242.8
Q ss_pred ceeEEeEEEEEcCCceechhHHhhhhCCCcCee--eEcccceEEeccCCCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEE
Q 012909 7 KNVGILALDIYFPPTCVLQEALEVHDGVSKGKY--TVGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEV 84 (453)
Q Consensus 7 ~~vgI~~i~~y~P~~~v~~~~l~~~~g~~~~k~--~~Gig~r~~av~~~~ed~~~la~~Aa~~aL~~agi~~~~Id~li~ 84 (453)
++++|.++|.|+|++.++++++++..+.+.+|+ ++||.+|+++ .++|...+|+++||++||+++|++|+|||+||+
T Consensus 2 ~~a~i~g~G~~lP~~~vtn~d~e~~~~tsdewI~~rtGir~R~~a--~~~e~~s~la~~Aa~~AL~~Agi~~~dIDlII~ 79 (323)
T COG0332 2 MNAKILGIGSYLPERVVTNADLEKRVDTSDEWIETRTGIRERRIA--ADDETTSDLAVEAARKALEDAGISPDDIDLIIV 79 (323)
T ss_pred CcceEEEEEeecCCcccChHHHHhccCCCcceeeeecCCceeeec--CCCccHHHHHHHHHHHHHHHcCCCHHHCCEEEE
Confidence 678999999999999999999999999999999 4788888765 779999999999999999999999999999999
Q ss_pred EcccCCCCCccHHHHHHHHhcccCCCCeeEEeeCCcChhHHHHHHHHHHHHHhCCCCCCeEEEEEeecc-----------
Q 012909 85 GSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDTA----------- 153 (453)
Q Consensus 85 ~t~s~~~~~~~~a~~l~~~Lgl~G~~~~~~~dv~~aC~gg~~AL~~A~~~v~sg~~~~~~aLVv~~d~~----------- 153 (453)
+|.||++..|++|+.||+.||+ .++.+||+..+|+|+++||.+|..+|++|.+ |+||||++|++
T Consensus 80 aT~tpd~~~Ps~A~~vq~~LG~---~~~~afDl~aaCsgf~yaL~~A~~~i~sG~~--k~vLVVg~e~~S~~ld~~dR~t 154 (323)
T COG0332 80 ATSTPDHLFPSTACLVQARLGL---GGAPAFDLQAACSGFLYALSVADGLIRSGGY--KNVLVVGAETLSRILDWTDRDT 154 (323)
T ss_pred EcCCcccCCChHHHHHHHHhCC---CCcceeechhhhHHHHHHHHHHHHHHHcCCC--CEEEEEehhHhhccCCHhhccc
Confidence 9999999999999999999998 6699999999999999999999999999987 99999999997
Q ss_pred -------ceeeeecCCC-Cc---eeccCceeeeccccccccccCCC---------CCCceecCcchHHHHHHHHHHHHHH
Q 012909 154 -------AVAMLIGPDA-PI---AFESKLRGSHMSHAYDFYKPNLA---------SEYPVVDGKLSQTCYLMALDSCYKY 213 (453)
Q Consensus 154 -------AvA~Ll~~~~-~l---~~~~~~~~~~~~~~~df~~p~~~---------~~~~~vdG~~s~~~y~~al~~~~~~ 213 (453)
|+|+||++.+ .. .+..+..+.+.... +.|... ..+..++|+.. |..++..+.+.
T Consensus 155 ~vlFgDGAgAvvl~~~~~~~~i~~~~l~sdg~~~~~l---~~~~~~~~~~~~~~~~~~~~m~Gr~v---fk~av~~~~~~ 228 (323)
T COG0332 155 CVLFGDGAGAVVLEATEDDNGILDTDLGSDGSQGDLL---YLPGGGSATPKEESGGGLLVMDGREV---FKFAVRAMPKA 228 (323)
T ss_pred eEEEcCCceEEEEecCCCCcCeeeeeeeccccCCCee---eccCCCCccccccccccceeeccHHH---HHHHHHHHHHH
Confidence 9999998885 21 11111122221111 112110 12456788877 66666666655
Q ss_pred HHHHHhhhhcCCCCccCccEEEecCcchHHHHHHHHhhhhhhhhccCCchhhHHhhhccCCCCCCccccccchhHHHHHH
Q 012909 214 FCQKFEKLEGRQFSMLDVDYFVFHSPYNKLVQKSFARLFFNDFLRNASSVDEIAKEKLAPYSTLSDVESYQSRDLEKASQ 293 (453)
Q Consensus 214 ~~~~~~~~~~~~~~~~d~d~~v~H~p~~km~~ka~~~l~~~~~~~~~~~~~~~~~~~l~~~l~l~~e~~~~~~~~~k~~~ 293 (453)
+.+.+ ++++++.+|||||++||+|.+|.++ +.+.+++|++ |++.
T Consensus 229 ~~~~L---~~~~l~~~dId~~vpHQan~ri~~~------------------------i~~~l~~~~~---------k~~~ 272 (323)
T COG0332 229 IEEVL---EKAGLTPEDIDWFVPHQANLRIIEA------------------------IAKKLGIPEE---------KVVV 272 (323)
T ss_pred HHHHH---HHcCCCHHHCCEEccccccHHHHHH------------------------HHHHcCCCHH---------HHhh
Confidence 55555 4567999999999999999999887 4455677776 6666
Q ss_pred HHHHHHhhhhcCCCcccccccCccccchHHHHHHHHHhhcCcCCCCCEEEEEEecchhhheeeEEEEe
Q 012909 294 QVAKQLYDLKVQPSTLIPKQVGNMYTASLYAAFASLLHEKHSSLEGKRVIMFSYGSGLTATMFSLQLQ 361 (453)
Q Consensus 294 ~~~~~~~~~~~~~s~~~~~~~GN~~taSl~l~L~sll~~~~~~~~Gd~ill~syGsG~~~~~~~l~~~ 361 (453)
++ .++||+++||+|++|.+++++ +++++||+|+|.+||+|++|++..++|.
T Consensus 273 ~~----------------~~yGNtsaAsiplaL~~~~~~-g~ik~Gd~ill~~fG~Gltwg~~~~r~~ 323 (323)
T COG0332 273 TV----------------DKYGNTSAASIPLALDEALRE-GRIKPGDLVLLEAFGGGLTWGAALVRWG 323 (323)
T ss_pred HH----------------HHhcccccchHHHHHHHHhhh-CCCCCCCEEEEEeecCcceeeeEEEEeC
Confidence 66 899999999999999999999 8999999999999999999999999984
No 10
>PRK05963 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=100.00 E-value=2.9e-43 Score=354.12 Aligned_cols=289 Identities=20% Similarity=0.257 Sum_probs=229.4
Q ss_pred eeEEeEEEEEcCCceechhHHhhhhCCCcCeeeEcccceEEeccCCCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEEcc
Q 012909 8 NVGILALDIYFPPTCVLQEALEVHDGVSKGKYTVGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSE 87 (453)
Q Consensus 8 ~vgI~~i~~y~P~~~v~~~~l~~~~g~~~~k~~~Gig~r~~av~~~~ed~~~la~~Aa~~aL~~agi~~~~Id~li~~t~ 87 (453)
+++|.+++.|+|+++|+++++++..|.+++++...+|.+++.++.++|++.+|+++||++||+++|++|++||+||++|+
T Consensus 3 ~~~I~~~g~~lP~~~v~~~~~~~~~~~~~~~i~~~~Gi~~r~~~~~~e~~~~la~~Aa~~aL~~ag~~~~~Id~li~~t~ 82 (326)
T PRK05963 3 SSRIAGFGHAVPDRRVENAEIEAQLGLETGWIERRTGIRCRRWAAPDETLSDLAASAGDMALSDAGIERSDIALTLLATS 82 (326)
T ss_pred ccEEEEEEEECCCCeecHHHHHHHcCCCHHHhhhccCCeEEEEcCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEECC
Confidence 58999999999999999999999999988888544555555566889999999999999999999999999999999999
Q ss_pred cCCCCCccHHHHHHHHhcccCCCCeeEEeeCCcChhHHHHHHHHHHHHHhCCCCCCeEEEEEeecc--------------
Q 012909 88 TVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDTA-------------- 153 (453)
Q Consensus 88 s~~~~~~~~a~~l~~~Lgl~G~~~~~~~dv~~aC~gg~~AL~~A~~~v~sg~~~~~~aLVv~~d~~-------------- 153 (453)
++++..|+.+.+|+++||+ +++.+||+.++|+|++.||++|.++++++ . ++||||++|.+
T Consensus 83 ~~d~~~p~~a~~v~~~Lg~---~~~~~~di~~~C~g~~~aL~~A~~~l~~~--~-~~aLVv~~d~~s~~~~~~~~~~~~l 156 (326)
T PRK05963 83 TPDHLLPPSAPLLAHRLGL---QNSGAIDLAGACAGFLYALVLADGFVRAQ--G-KPVLVVAANILSRRINMAERASAVL 156 (326)
T ss_pred CCCCCCCcHHHHHHHHhCC---CCCceeeccchhhHHHHHHHHHHHHHHcC--C-CeEEEEEechhhccCCccccCceEE
Confidence 9988899999999999998 56899999999999999999999999987 3 89999999975
Q ss_pred ----ceeeeecCCCCceeccCceeeecc---ccccccc-cCCCCC-------------CceecCcchHHHHHHHHHHHHH
Q 012909 154 ----AVAMLIGPDAPIAFESKLRGSHMS---HAYDFYK-PNLASE-------------YPVVDGKLSQTCYLMALDSCYK 212 (453)
Q Consensus 154 ----AvA~Ll~~~~~l~~~~~~~~~~~~---~~~df~~-p~~~~~-------------~~~vdG~~s~~~y~~al~~~~~ 212 (453)
|+|+||++++.- ..++..+... +.+|+++ |.++.. ....+|+.....+.+.+.++++
T Consensus 157 fGDgA~A~ll~~~~~~--~~~~l~~~~~t~~~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (326)
T PRK05963 157 FADAAGAVVLAPSAKA--NSGVLGSQLISDGSHYDLIKIPAGGSARPFAPERDASEFLMTMQDGRAVFTEAVRMMSGASQ 234 (326)
T ss_pred EeecceEEEEEecCCC--CCceEEEEEEEcCCCCCeEEeCCCCcCCCCcccccccccceEecCCHHHHHHHHHHHHHHHH
Confidence 889999876420 0011111111 1233322 222111 1123666665555555555555
Q ss_pred HHHHHHhhhhcCCCCccCccEEEecCcchHHHHHHHHhhhhhhhhccCCchhhHHhhhccCCCCCCccccccchhHHHHH
Q 012909 213 YFCQKFEKLEGRQFSMLDVDYFVFHSPYNKLVQKSFARLFFNDFLRNASSVDEIAKEKLAPYSTLSDVESYQSRDLEKAS 292 (453)
Q Consensus 213 ~~~~~~~~~~~~~~~~~d~d~~v~H~p~~km~~ka~~~l~~~~~~~~~~~~~~~~~~~l~~~l~l~~e~~~~~~~~~k~~ 292 (453)
.++++ +|++++|||+|+|||++.+++++ +.+.++++++ |..
T Consensus 235 ~~L~~------~gl~~~did~~~~h~~~~~~~~~------------------------~~~~l~l~~~---------k~~ 275 (326)
T PRK05963 235 NVLAS------AAMTPQDIDRFFPHQANARIVDK------------------------VCETIGIPRA---------KAA 275 (326)
T ss_pred HHHHH------cCCCHHHCCEEEeCCCCHHHHHH------------------------HHHHcCCCHH---------Hhh
Confidence 55544 46999999999999999999877 3345688876 333
Q ss_pred HHHHHHHhhhhcCCCcccccccCccccchHHHHHHHHHhhcCcCCCCCEEEEEEecchhhheeeEEEE
Q 012909 293 QQVAKQLYDLKVQPSTLIPKQVGNMYTASLYAAFASLLHEKHSSLEGKRVIMFSYGSGLTATMFSLQL 360 (453)
Q Consensus 293 ~~~~~~~~~~~~~~s~~~~~~~GN~~taSl~l~L~sll~~~~~~~~Gd~ill~syGsG~~~~~~~l~~ 360 (453)
.++ +++||++++|+|++|..++++ +++++||+|+|++||+|+++++.+++|
T Consensus 276 ~~l----------------~~~Gn~~sas~~~~L~~~~~~-~~~~~Gd~vll~~~G~G~~~~~~ll~~ 326 (326)
T PRK05963 276 STL----------------ETYGNSSAATIPLSLSLANLE-QPLREGERLLFAAAGAGMTGGAVVMRV 326 (326)
T ss_pred hhH----------------HhhCcHHHHHHHHHHHHHHHh-CCCCCCCEEEEEEEehhhhheeeEEeC
Confidence 333 799999999999999999987 778899999999999999999999886
No 11
>PF01154 HMG_CoA_synt_N: Hydroxymethylglutaryl-coenzyme A synthase N terminal; InterPro: IPR013528 Synonym(s): 3-hydroxy-3-methylglutaryl-coenzyme A synthase, HMG-CoA synthase. Hydroxymethylglutaryl-CoA synthase (2.3.3.10 from EC) catalyses the condensation of acetyl-CoA with acetoacetyl-CoA to produce HMG-CoA and CoA, the second reaction in the mevalonate-dependent isoprenoid biosynthesis pathway. HMG-CoA synthase contains an important catalytic cysteine residue that acts as a nucleophile in the first step of the reaction: the acetylation of the enzyme by acetyl-CoA (its first substrate) to produce an acetyl-enzyme thioester, releasing the reduced coenzyme A. The subsequent nucleophilic attack on acetoacetyl-CoA (its second substrate) leads to the formation of HMG-CoA []. HMG-CoA synthase occurs in eukaryotes, archaea and certain bacteria []. In vertebrates, there are two isozymes located in different subcellular compartments: a cytosolic form that is the starting point of the mevalonate pathway (leads to cholesterol and other sterolic and isoprenoid compounds), and a mitochondrial form responsible for ketone body biosynthesis. HMG-CoA is also found in other eukaryotes such as insects, plants and fungi []. In bacteria, isoprenoid precursors are generally synthesised via an alternative, non-mevalonate pathway, however a number of Gram-positive pathogens utilise a mevalonate pathway involving HMG-CoA synthase that is parallel to that found in eukaryotes [, ]. This entry represents the N-terminal domain of HMG-CoA synthase enzymes from both eukaryotes and prokaryotes.; GO: 0004421 hydroxymethylglutaryl-CoA synthase activity, 0008299 isoprenoid biosynthetic process; PDB: 1X9E_B 2HDB_B 2WYA_C 2P8U_A 3V4X_A 3V4N_C 3LEH_A 1TXT_D 1TVZ_A 2FA0_A ....
Probab=100.00 E-value=1.9e-43 Score=316.96 Aligned_cols=160 Identities=54% Similarity=0.890 Sum_probs=142.4
Q ss_pred CCceeEEeEEEEEcCCceechhHHhhhhCCCcCeeeEcccceEEeccCCCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEE
Q 012909 5 HPKNVGILALDIYFPPTCVLQEALEVHDGVSKGKYTVGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEV 84 (453)
Q Consensus 5 ~~~~vgI~~i~~y~P~~~v~~~~l~~~~g~~~~k~~~Gig~r~~av~~~~ed~~~la~~Aa~~aL~~agi~~~~Id~li~ 84 (453)
||++|||++|++|+|+++|++++|++++|++++||++|+||.+|+|++++||+++||++|++++|++.+++|++|++|+|
T Consensus 1 ~p~~VGI~~i~~y~p~~~v~~~~La~~~g~d~~K~~~glgq~~~av~~~~ED~vTmA~nAa~~ll~~~~id~~~Ig~l~v 80 (174)
T PF01154_consen 1 RPQNVGIDAIEFYIPRYYVDQEELAEARGVDPGKYTIGLGQEKMAVPPPDEDIVTMAANAAKPLLDRYNIDPDDIGRLIV 80 (174)
T ss_dssp --SSEEEEEEEEE-ESEEEEHHHHHHHTTS-TCHHHTTT--SEEEE--TTS-HHHHHHHHHHTTHHHHT-HHHHEEEEEE
T ss_pred CCccccEeEEEEecCceEecHHHHHHHhCCCHHHhhhhcCeeEEEeCCCcccHHHHHHHHHHHHHHHcCCCHHHccEEEE
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EcccCCCCCccHHHHHHHHhcccCCCCeeEEeeCCcChhHHHHHHHHHHHHHhCCCCCCeEEEEEeecc-----------
Q 012909 85 GSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDTA----------- 153 (453)
Q Consensus 85 ~t~s~~~~~~~~a~~l~~~Lgl~G~~~~~~~dv~~aC~gg~~AL~~A~~~v~sg~~~~~~aLVv~~d~~----------- 153 (453)
||||++|.+|+++++||++||++|+++|+++|+++||+|||+||++|.+||+++.|||+++|||++|++
T Consensus 81 gTES~vD~sKs~~t~v~~ll~~s~~~~~~~~e~k~ACygGTaAL~~a~~~v~s~~~~g~~aLVVasDiA~y~~g~~e~Tq 160 (174)
T PF01154_consen 81 GTESGVDKSKSISTYVHQLLGLSGNPDCRGVEMKQACYGGTAALQNAVNWVASSPWDGRKALVVASDIARYDLGSAEPTQ 160 (174)
T ss_dssp E-SS-SBSSS-HHHHHHHHTTTTT-SSSEEEEEESGGGHHHHHHHHHHHHHCSTTSTTEEEEEEEEEEE--STTTTGGG-
T ss_pred eccccccccccHHHHHHHHhCcCCCCceeeeehhhhhHHHHHHHHHHHHHHhcCCCCCCeEEEEeccccccCCCCccccc
Confidence 999999999999999999999988889999999999999999999999999999999999999999998
Q ss_pred ---ceeeeecCCCC
Q 012909 154 ---AVAMLIGPDAP 164 (453)
Q Consensus 154 ---AvA~Ll~~~~~ 164 (453)
|+||||++++|
T Consensus 161 GAGAVAmLi~~nap 174 (174)
T PF01154_consen 161 GAGAVAMLIGPNAP 174 (174)
T ss_dssp EEEEEEEEEECS-S
T ss_pred cceeEEEEecCCCC
Confidence 99999999975
No 12
>PRK12879 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=3.6e-41 Score=338.48 Aligned_cols=292 Identities=16% Similarity=0.216 Sum_probs=226.2
Q ss_pred ceeEEeEEEEEcCCceechhHHhhhhCCCcCee--eEcccceEEeccCCCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEE
Q 012909 7 KNVGILALDIYFPPTCVLQEALEVHDGVSKGKY--TVGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEV 84 (453)
Q Consensus 7 ~~vgI~~i~~y~P~~~v~~~~l~~~~g~~~~k~--~~Gig~r~~av~~~~ed~~~la~~Aa~~aL~~agi~~~~Id~li~ 84 (453)
++++|.++++|+|+++++++|+++..+.+.+++ +.|+.+|++ +.++++..+|+++|++++|+++|++|++||.|++
T Consensus 3 ~~~~I~~ig~~~P~~~v~~~e~~~~~~~~~~~i~~~~Gi~~r~~--~~~~~~~~~la~~A~~~al~~ag~~~~~Id~li~ 80 (325)
T PRK12879 3 SYARITGIGTYVPPRVLTNDDLETFIDTSDEWIVQRTGIKERRI--AHVEEYTSDLAIKAAERALARAGLDAEDIDLIIV 80 (325)
T ss_pred CCCEEEEEEEECCCcEEcHHHHHHhcCCCHHHhhhccCceEEEE--CCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEE
Confidence 679999999999999999999999988776665 456666654 4788999999999999999999999999999999
Q ss_pred EcccCCCCCccHHHHHHHHhcccCCCCeeEEeeCCcChhHHHHHHHHHHHHHhCCCCCCeEEEEEeecc-----------
Q 012909 85 GSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDTA----------- 153 (453)
Q Consensus 85 ~t~s~~~~~~~~a~~l~~~Lgl~G~~~~~~~dv~~aC~gg~~AL~~A~~~v~sg~~~~~~aLVv~~d~~----------- 153 (453)
+|+++....|+.+.+|++.||+ ++++++++.++|+|++.||..|.++|++|.. ++||||++|.+
T Consensus 81 ~~~~~~~~~~~~a~~l~~~lg~---~~~~~~~v~~~C~~~~~al~~A~~~l~~g~~--~~~Lvv~~e~~s~~~~~~~~~~ 155 (325)
T PRK12879 81 ATTTPDYLFPSTASQVQARLGI---PNAAAFDINAACAGFLYGLETANGLITSGLY--KKVLVIGAERLSKVTDYTDRTT 155 (325)
T ss_pred EcCCCCCCCChHHHHHHHHhCC---CCCcEEEECccchHHHHHHHHHHHHHHcCCC--CEEEEEEehhhcCcCCccccCc
Confidence 9999888889999999999998 5588999999999999999999999999954 99999999975
Q ss_pred -------ceeeeecCCCC-ceeccCceeeeccccccccccCCCC----------CCceecCcchHHHHHHHHHHHHHHHH
Q 012909 154 -------AVAMLIGPDAP-IAFESKLRGSHMSHAYDFYKPNLAS----------EYPVVDGKLSQTCYLMALDSCYKYFC 215 (453)
Q Consensus 154 -------AvA~Ll~~~~~-l~~~~~~~~~~~~~~~df~~p~~~~----------~~~~vdG~~s~~~y~~al~~~~~~~~ 215 (453)
|+|+||++++. ..+......+.......++.|..+. .+..++|+.........+.++++.++
T Consensus 156 ~~~~GDgAaA~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L 235 (325)
T PRK12879 156 CILFGDGAGAVVLEATENEPGFIDYVLGTDGDGGDILYRTGLGTTMDRDALSGDGYIVQNGREVFKWAVRTMPKGARQVL 235 (325)
T ss_pred eEEEeecceEEEEEecCCCCCeEEEEEEEcCCCCCeEEEcCCCCCCCccccccCccEEEcCHHHHHHHHHHHHHHHHHHH
Confidence 88999988763 1111001111111111122222211 12344555432222333334444444
Q ss_pred HHHhhhhcCCCCccCccEEEecCcchHHHHHHHHhhhhhhhhccCCchhhHHhhhccCCCCCCccccccchhHHHHHHHH
Q 012909 216 QKFEKLEGRQFSMLDVDYFVFHSPYNKLVQKSFARLFFNDFLRNASSVDEIAKEKLAPYSTLSDVESYQSRDLEKASQQV 295 (453)
Q Consensus 216 ~~~~~~~~~~~~~~d~d~~v~H~p~~km~~ka~~~l~~~~~~~~~~~~~~~~~~~l~~~l~l~~e~~~~~~~~~k~~~~~ 295 (453)
+ ++++.++|||+|++||++.++++. +.+.++++.+ |...++
T Consensus 236 ~------~~g~~~~did~~~~h~~~~~~~~~------------------------~~~~lg~~~~---------~~~~~~ 276 (325)
T PRK12879 236 E------KAGLTKDDIDWVIPHQANLRIIES------------------------LCEKLGIPME---------KTLVSV 276 (325)
T ss_pred H------HcCCCHHHCCEEEECCCCHHHHHH------------------------HHHHcCCCHH---------HhhhhH
Confidence 4 446889999999999999999876 3455678776 332222
Q ss_pred HHHHhhhhcCCCcccccccCccccchHHHHHHHHHhhcCcCCCCCEEEEEEecchhhheeeEEEEe
Q 012909 296 AKQLYDLKVQPSTLIPKQVGNMYTASLYAAFASLLHEKHSSLEGKRVIMFSYGSGLTATMFSLQLQ 361 (453)
Q Consensus 296 ~~~~~~~~~~~s~~~~~~~GN~~taSl~l~L~sll~~~~~~~~Gd~ill~syGsG~~~~~~~l~~~ 361 (453)
+++||++++|+|++|.+++++ +.+++||+|+|++||+|+++++++++|+
T Consensus 277 ----------------~~~Gn~~sas~~~~L~~~~~~-g~~~~Gd~vll~~~G~G~~~~~~l~~~~ 325 (325)
T PRK12879 277 ----------------EYYGNTSAATIPLALDLALEQ-GKIKPGDTLLLYGFGAGLTWAALLVKWG 325 (325)
T ss_pred ----------------hhhCchHHHHHHHHHHHHHHc-CCCCCCCEEEEEEEchhhhhEEEEEEeC
Confidence 799999999999999999998 7889999999999999999999999984
No 13
>CHL00203 fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Provisional
Probab=100.00 E-value=8.9e-41 Score=336.17 Aligned_cols=290 Identities=21% Similarity=0.278 Sum_probs=223.0
Q ss_pred ceeEEeEEEEEcCCceechhHHhhhhCCCcCee--eEcccceEEeccCCCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEE
Q 012909 7 KNVGILALDIYFPPTCVLQEALEVHDGVSKGKY--TVGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEV 84 (453)
Q Consensus 7 ~~vgI~~i~~y~P~~~v~~~~l~~~~g~~~~k~--~~Gig~r~~av~~~~ed~~~la~~Aa~~aL~~agi~~~~Id~li~ 84 (453)
|.|+|.++++|+|+++|+++|+++..+.+..++ ++|+..|+ +..++++..+|+.+|++++|+++|++|++||.||+
T Consensus 1 ~~v~I~~~g~~lP~~~v~~~e~~~~~~~~~~~i~~~~gi~~r~--~~~~~~~~~~la~~A~~~aL~~ag~~~~dId~vi~ 78 (326)
T CHL00203 1 MGVHILSTGSSVPNFSVENQQFEDIIETSDHWISTRTGIKKRH--LAPSSTSLTKLAAEAANKALDKAHMDPLEIDLIIL 78 (326)
T ss_pred CccEEEEEEEECCCeEEcHHHHHHhcCCChhhEeeccCeEEEE--eCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEE
Confidence 568999999999999999999999999766777 45666555 45788999999999999999999999999999999
Q ss_pred EcccCCCCCccHHHHHHHHhcccCCCCeeEEeeCCcChhHHHHHHHHHHHHHhCCCCCCeEEEEEeecc-----------
Q 012909 85 GSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDTA----------- 153 (453)
Q Consensus 85 ~t~s~~~~~~~~a~~l~~~Lgl~G~~~~~~~dv~~aC~gg~~AL~~A~~~v~sg~~~~~~aLVv~~d~~----------- 153 (453)
+|+++.+.. +.+.++++.||+ .+++++++.++|+|++.||++|.++|++|.. +++|||++|.+
T Consensus 79 ~s~~~~~~~-~~~~~v~~~Lg~---~~~~~~~v~~~Casg~~al~~A~~~i~sg~~--~~~Lvv~~e~~s~~~~~~~~~~ 152 (326)
T CHL00203 79 ATSTPDDLF-GSASQLQAEIGA---TRAVAFDITAACSGFILALVTATQFIQNGSY--KNILVVGADTLSKWIDWSDRKT 152 (326)
T ss_pred EeCCCCCCC-chHHHHHHHhCC---CCCceeeecccchhHHHHHHHHHHHHHcCCC--CEEEEEEehhhhCcCCcccCCc
Confidence 998887654 567899999998 5788999999999999999999999999965 99999999985
Q ss_pred -------ceeeeecCCCC--c-eeccCceeeeccccccc-cc------------cCCCCCCceecCcchHHHHHHHHHHH
Q 012909 154 -------AVAMLIGPDAP--I-AFESKLRGSHMSHAYDF-YK------------PNLASEYPVVDGKLSQTCYLMALDSC 210 (453)
Q Consensus 154 -------AvA~Ll~~~~~--l-~~~~~~~~~~~~~~~df-~~------------p~~~~~~~~vdG~~s~~~y~~al~~~ 210 (453)
|+|+||++.+. + .+.....+.+... ..+ .. |.....+..++|+......+..+..+
T Consensus 153 ~~~fgDga~A~ll~~~~~~~~~~~~~~t~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 231 (326)
T CHL00203 153 CILFGDGAGAAIIGASYENSILGFKLCTDGKLNSH-LQLMNKPVNNQSFGTTKLPQGQYQSISMNGKEVYKFAVFQVPAV 231 (326)
T ss_pred eEEEcceeeEEEEEEcCCCCeEEEEEEEcCCCcce-EEecCCCCCcccccccccccCCcceEEECCHHHHHHHHHHHHHH
Confidence 88999987653 1 1110000101000 000 01 11111223456665533222333333
Q ss_pred HHHHHHHHhhhhcCCCCccCccEEEecCcchHHHHHHHHhhhhhhhhccCCchhhHHhhhccCCCCCCccccccchhHHH
Q 012909 211 YKYFCQKFEKLEGRQFSMLDVDYFVFHSPYNKLVQKSFARLFFNDFLRNASSVDEIAKEKLAPYSTLSDVESYQSRDLEK 290 (453)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~d~d~~v~H~p~~km~~ka~~~l~~~~~~~~~~~~~~~~~~~l~~~l~l~~e~~~~~~~~~k 290 (453)
++.++ ++.|++++|||+|++||++.++++. +.+.+++|++ |
T Consensus 232 i~~~L------~~~g~~~~did~~~~hq~~~~~~~~------------------------~~~~lgl~~~---------k 272 (326)
T CHL00203 232 IIKCL------NALNISIDEVDWFILHQANKRILEA------------------------IANRLSVPNS---------K 272 (326)
T ss_pred HHHHH------HHcCCCHHHCCEEEECCCCHHHHHH------------------------HHHHhCCCHH---------H
Confidence 44433 3457999999999999999999876 4456688876 3
Q ss_pred HHHHHHHHHhhhhcCCCcccccccCccccchHHHHHHHHHhhcCcCCCCCEEEEEEecchhhheeeEEEEe
Q 012909 291 ASQQVAKQLYDLKVQPSTLIPKQVGNMYTASLYAAFASLLHEKHSSLEGKRVIMFSYGSGLTATMFSLQLQ 361 (453)
Q Consensus 291 ~~~~~~~~~~~~~~~~s~~~~~~~GN~~taSl~l~L~sll~~~~~~~~Gd~ill~syGsG~~~~~~~l~~~ 361 (453)
...++ +++||++|+|++++|.+++++ +++++||+|+|+++|+|++|++.+++|+
T Consensus 273 ~~~~l----------------~~~Gn~~sasi~~~L~~~~~~-g~~~~Gd~vll~~~G~G~s~~~~v~~~~ 326 (326)
T CHL00203 273 MITNL----------------EKYGNTSAASIPLALDEAIQN-NKIQPGQIIVLSGFGAGLTWGAIVLKWK 326 (326)
T ss_pred hhhHH----------------HhhCcHHHHHHHHHHHHHHHh-CCCCCCCEEEEEEEchhhhheEEEEEeC
Confidence 33333 799999999999999999998 7889999999999999999999999984
No 14
>PRK07204 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=8e-41 Score=336.77 Aligned_cols=288 Identities=15% Similarity=0.193 Sum_probs=226.0
Q ss_pred ceeEEeEEEEEcCCceechhHHhhhhCCCcCeee--EcccceEEeccCCCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEE
Q 012909 7 KNVGILALDIYFPPTCVLQEALEVHDGVSKGKYT--VGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEV 84 (453)
Q Consensus 7 ~~vgI~~i~~y~P~~~v~~~~l~~~~g~~~~k~~--~Gig~r~~av~~~~ed~~~la~~Aa~~aL~~agi~~~~Id~li~ 84 (453)
++++|.++++|+|+++++++++++..+.+.+++. +|+..|++ .. +++..+|+.+|++++|+++|++|++||+||+
T Consensus 3 ~~~~I~~~g~~lP~~~v~~~~~~~~~~~~~~~i~~~~Gi~~R~~--~~-~~~~~~la~~Aa~~aL~~ag~~~~dId~li~ 79 (329)
T PRK07204 3 RYISIKGIGTYLPKRKVDSLELDKKLDLPEGWVLKKSGVKTRHF--VD-GETSSYMGAEAAKKAVEDAKLTLDDIDCIIC 79 (329)
T ss_pred CCcEEEEEEEeCCCceecHHHHHHhhCCCHhHhhhccCceEEee--cC-CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEE
Confidence 5689999999999999999999999998877774 45555554 35 8999999999999999999999999999999
Q ss_pred EcccCCCCCccHHHHHHHHhcccCCC-CeeEEeeCCcChhHHHHHHHHHHHHHhCCCCCCeEEEEEeecc----------
Q 012909 85 GSETVIDKSKSIKTFLMQIFEKYGNT-DIEGVDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDTA---------- 153 (453)
Q Consensus 85 ~t~s~~~~~~~~a~~l~~~Lgl~G~~-~~~~~dv~~aC~gg~~AL~~A~~~v~sg~~~~~~aLVv~~d~~---------- 153 (453)
+|+++.+..|+.+.+|++.||+ .. .++++++.++|+|++.||..|..++++|.. ++||||++|.+
T Consensus 80 ~~~~~~~~~p~~a~~v~~~lgl--~~~~~~~~~v~~~C~~~~~al~~a~~~l~~g~~--~~~Lvv~~e~~s~~~~~~~~~ 155 (329)
T PRK07204 80 ASGTIQQAIPCTASLIQEQLGL--QHSGIPCFDINSTCLSFITALDTISYAIECGRY--KRVLIISSEISSVGLNWGQNE 155 (329)
T ss_pred ECCCCCCCCccHHHHHHHHhCC--CCCCceEEEccchhHHHHHHHHHHHHHHHCCCC--CEEEEEEeccccCCCCcccCc
Confidence 9999988789999999999998 33 479999999999999999999999999955 99999999975
Q ss_pred --------ceeeeecCCCCceeccCceeeeccccc---cc---------------cccCCCCCCceecCcchHHHHHHHH
Q 012909 154 --------AVAMLIGPDAPIAFESKLRGSHMSHAY---DF---------------YKPNLASEYPVVDGKLSQTCYLMAL 207 (453)
Q Consensus 154 --------AvA~Ll~~~~~l~~~~~~~~~~~~~~~---df---------------~~p~~~~~~~~vdG~~s~~~y~~al 207 (453)
|+|+||++++.- .++.++++.... ++ +.+.....+..++|+.........+
T Consensus 156 ~~~lfGDGAaA~ll~~~~~~---~~il~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (329)
T PRK07204 156 SCILFGDGAAAVVITKGDHS---SRILASHMETYSSGAHLSEIRGGGTMIHPREYSEERKEDFLFDMNGRAIFKLSSKYL 232 (329)
T ss_pred ceEEEecccEEEEEEEcCCC---CcEEEEEEEEecCCCCceEEecCCcCCCCcccccccccCceEEECCHHHHHHHHHHH
Confidence 889999877531 112222111111 11 1110000022355655544444555
Q ss_pred HHHHHHHHHHHhhhhcCCCCccCccEEEecCcchHHHHHHHHhhhhhhhhccCCchhhHHhhhccCCCCCCccccccchh
Q 012909 208 DSCYKYFCQKFEKLEGRQFSMLDVDYFVFHSPYNKLVQKSFARLFFNDFLRNASSVDEIAKEKLAPYSTLSDVESYQSRD 287 (453)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~d~d~~v~H~p~~km~~ka~~~l~~~~~~~~~~~~~~~~~~~l~~~l~l~~e~~~~~~~ 287 (453)
..+++.++++ .|++++|||+|++||++.++++. +.+.+++|++
T Consensus 233 ~~~i~~~L~~------~gl~~~did~~~~H~~~~~~~~~------------------------i~~~l~l~~e------- 275 (329)
T PRK07204 233 MKFIDKLLMD------AGYTLADIDLIVPHQASGPAMRL------------------------IRKKLGVDEE------- 275 (329)
T ss_pred HHHHHHHHHH------cCCCHHHCCEEEeCCCCHHHHHH------------------------HHHHcCCCHH-------
Confidence 5555555544 46999999999999999999875 3455688776
Q ss_pred HHHHHHHHHHHHhhhhcCCCcccccccCccccchHHHHHHHHHhhcCcCCCCCEEEEEEecchhhheeeEEEE
Q 012909 288 LEKASQQVAKQLYDLKVQPSTLIPKQVGNMYTASLYAAFASLLHEKHSSLEGKRVIMFSYGSGLTATMFSLQL 360 (453)
Q Consensus 288 ~~k~~~~~~~~~~~~~~~~s~~~~~~~GN~~taSl~l~L~sll~~~~~~~~Gd~ill~syGsG~~~~~~~l~~ 360 (453)
|.+.++ +++||++++|+|++|.+++++ +++++|++|+|++||+|+++++.++++
T Consensus 276 --~~~~~~----------------~~~Gn~~sas~~~~L~~~~~~-g~~~~Gd~vll~~~G~G~s~~~~ll~~ 329 (329)
T PRK07204 276 --RFVTIF----------------EDHGNMIAASIPVALFEAIKQ-KKVQRGNKILLLGTSAGLSIGGILLEY 329 (329)
T ss_pred --HhhhhH----------------hhhCcHHHHHHHHHHHHHHHc-CCCCCCCEEEEEEEchhhhheeeEEeC
Confidence 333333 799999999999999999998 788999999999999999999999875
No 15
>PRK09258 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=3.1e-41 Score=340.90 Aligned_cols=294 Identities=20% Similarity=0.198 Sum_probs=232.2
Q ss_pred CCceeEEeEEEEEcCCceechhHHhhhh-------CCCcCeee--EcccceEEeccCCCCCHHHHHHHHHHHHHHHcCCC
Q 012909 5 HPKNVGILALDIYFPPTCVLQEALEVHD-------GVSKGKYT--VGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKID 75 (453)
Q Consensus 5 ~~~~vgI~~i~~y~P~~~v~~~~l~~~~-------g~~~~k~~--~Gig~r~~av~~~~ed~~~la~~Aa~~aL~~agi~ 75 (453)
+..+|+|.++++|+|+++++++++++.. +.+++++. +|+..|++ .++++++.+|+++|++++|+++|++
T Consensus 2 ~~~~v~I~~~g~~lP~~~v~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~--~~~~~~~~~la~~Aa~~aL~~ag~~ 79 (338)
T PRK09258 2 KYSNVAILSLAYELAPVVVTSSEIEERLAPLYERLRLPPGQLEALTGIRERRW--WPEGTQLSDGAIAAGRKALAEAGID 79 (338)
T ss_pred cccceEEEEEEecCCCccCcHHHHHHHhhhcccccCCChhHhhhhcCceeEec--CCCCCCHHHHHHHHHHHHHHHcCCC
Confidence 4568999999999999999999999864 34556563 56666654 4778999999999999999999999
Q ss_pred cCCcCEEEEEcccCCCCCccHHHHHHHHhcccCCCCeeEEeeCCcChhHHHHHHHHHHHHHhCCCCCCeEEEEEeecc--
Q 012909 76 PTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDTA-- 153 (453)
Q Consensus 76 ~~~Id~li~~t~s~~~~~~~~a~~l~~~Lgl~G~~~~~~~dv~~aC~gg~~AL~~A~~~v~sg~~~~~~aLVv~~d~~-- 153 (453)
+++||.|+++|+++.+..|+.+.+|++.||+ +.+++++++.++|+|++.||+.|.++|++|.. ++||||++|++
T Consensus 80 ~~~Id~li~~s~~~~~~~p~~a~~v~~~lgl--~~~~~~~~v~~~C~~~~~al~~A~~~i~~g~~--~~~Lvv~~e~~s~ 155 (338)
T PRK09258 80 PSDIGLLINTSVCRDYLEPATACRVHHNLGL--PKSCANFDVSNACLGFLNGMLDAANMIELGQI--DYALVVSGESARE 155 (338)
T ss_pred HHHCCEEEEEcCCCCCCCChHHHHHHHHcCC--CCCCceeehhhhhHHHHHHHHHHHHHHHcCCC--CEEEEEEecccch
Confidence 9999999999999888889999999999998 55789999999999999999999999999954 99999999941
Q ss_pred -------------------------------ceeeeecCCCCceeccCceeeeccccccccccC-CCCCCceecCcchHH
Q 012909 154 -------------------------------AVAMLIGPDAPIAFESKLRGSHMSHAYDFYKPN-LASEYPVVDGKLSQT 201 (453)
Q Consensus 154 -------------------------------AvA~Ll~~~~~l~~~~~~~~~~~~~~~df~~p~-~~~~~~~vdG~~s~~ 201 (453)
|+|+||++++.-.-...+.+..+....+++... ....+..++++....
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~GDGA~A~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (338)
T PRK09258 156 IVEATIDRLLAPETTREDFAQSFATLTLGSGAAAAVLTRGSLHPRGHRLLGGVTRAATEHHELCQGGRDGMRTDAVGLLK 235 (338)
T ss_pred hccchhhhhccCccchhhhhhccceEEecccceEEEEecCCCCCCcceeeeeeeecCCCcccccccCccceEEcHHHHHH
Confidence 888888876421000112222222222332211 012345578887777
Q ss_pred HHHHHHHHHHHHHHHHHhhhhcCCCCccCccEEEecCcchHHHHHHHHhhhhhhhhccCCchhhHHhhhccCCCCCCccc
Q 012909 202 CYLMALDSCYKYFCQKFEKLEGRQFSMLDVDYFVFHSPYNKLVQKSFARLFFNDFLRNASSVDEIAKEKLAPYSTLSDVE 281 (453)
Q Consensus 202 ~y~~al~~~~~~~~~~~~~~~~~~~~~~d~d~~v~H~p~~km~~ka~~~l~~~~~~~~~~~~~~~~~~~l~~~l~l~~e~ 281 (453)
.+...+..+++.++++. |++++|||+|++||++.++++. +.+.+++|++
T Consensus 236 ~~~~~~~~~~~~~L~~~------g~~~~did~~i~H~~~~~~~~~------------------------~~~~lgl~~~- 284 (338)
T PRK09258 236 EGVELAVDTWEAFLAQL------GWAVEQVDRVICHQVGAAHTRA------------------------ILKALGIDPE- 284 (338)
T ss_pred HHHHHHHHHHHHHHHHc------CCCHHHCCEEecCCCCHHHHHH------------------------HHHHhCCCHH-
Confidence 77776666766666554 5889999999999999999876 3455688876
Q ss_pred cccchhHHHHHHHHHHHHhhhhcCCCcccccccCccccchHHHHHHHHHhhcCcCCCCCEEEEEEecchhhheeeEEEE
Q 012909 282 SYQSRDLEKASQQVAKQLYDLKVQPSTLIPKQVGNMYTASLYAAFASLLHEKHSSLEGKRVIMFSYGSGLTATMFSLQL 360 (453)
Q Consensus 282 ~~~~~~~~k~~~~~~~~~~~~~~~~s~~~~~~~GN~~taSl~l~L~sll~~~~~~~~Gd~ill~syGsG~~~~~~~l~~ 360 (453)
|.+.++ +++|||+++|+|++|++++++ +++++|++|+|++||+|+++++++++|
T Consensus 285 --------k~~~~~----------------~~~GN~~sas~~~~L~~~~~~-g~~~~Gd~vll~~~G~G~s~~~~~~~~ 338 (338)
T PRK09258 285 --------KVFTTF----------------PTLGNMGPASLPITLAMAAEE-GFLKPGDRVALLGIGSGLNCSMLEVKW 338 (338)
T ss_pred --------HceehH----------------hhhCCcHHhHHHHHHHHHHHh-CCCCCCCEEEEEEechhHhhHhHeeeC
Confidence 332222 699999999999999999988 788999999999999999999999886
No 16
>PRK12880 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=1.8e-40 Score=336.84 Aligned_cols=289 Identities=21% Similarity=0.235 Sum_probs=221.0
Q ss_pred CCceeEEeEEEEEcCCceechhHH-hhhhCCCc---Cee--eEcccceEEeccCCCCCHHHHHHHHHHHHHHHcCCCcCC
Q 012909 5 HPKNVGILALDIYFPPTCVLQEAL-EVHDGVSK---GKY--TVGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQ 78 (453)
Q Consensus 5 ~~~~vgI~~i~~y~P~~~v~~~~l-~~~~g~~~---~k~--~~Gig~r~~av~~~~ed~~~la~~Aa~~aL~~agi~~~~ 78 (453)
+.++++|.++++|+|+++|+++++ .+..+.+. .++ .+||..|++ +.++|++.+|+++|+++||+++|++|+|
T Consensus 4 ~~~~~~I~~~g~~lP~~~v~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~--~~~~e~~~~la~~Aa~~aL~~a~~~~~d 81 (353)
T PRK12880 4 RFDKAKISGICVSVPEHKICIDDELESVFSNDIKTLKRMKKVIGLNTRYI--CDENTCVSDLGKHAANTLLQGLNIDKNS 81 (353)
T ss_pred cccccEEEEEEEECCCeEecHHHHHHHhcCcchhhhhhhhhccCceEEEe--CCCCCCHHHHHHHHHHHHHHHcCCCHHH
Confidence 467899999999999999999975 44443221 233 356666654 4678999999999999999999999999
Q ss_pred cCEEEEEcccCCCCCccHHHHHHHHhcccCCCCeeEEeeCCcChhHHHHHHHHHHHHHhCCCCCCeEEEEEeecc-----
Q 012909 79 IGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDTA----- 153 (453)
Q Consensus 79 Id~li~~t~s~~~~~~~~a~~l~~~Lgl~G~~~~~~~dv~~aC~gg~~AL~~A~~~v~sg~~~~~~aLVv~~d~~----- 153 (453)
||+||++|+|+++..|+++.+|+++||+ ++++.+||+++||+|++.||++|.+|+++| +.+ ||||++|.+
T Consensus 82 Id~lI~~t~t~d~~~P~~a~~v~~~Lg~--~~~~~~~di~~~C~g~~~aL~~A~~~i~~~--~~~-~LVv~~e~~S~~~~ 156 (353)
T PRK12880 82 LDALIVVTQSPDFFMPSTACYLHQLLNL--SSKTIAFDLGQACAGYLYGLFVAHSLIQSG--LGK-ILLICGDTLSKFIH 156 (353)
T ss_pred CCEEEEEcCCCCCCCCcHHHHHHHHhCC--CCCceEEehhhhhHHHHHHHHHHHHHHHcC--CCC-EEEEEehhhhccCC
Confidence 9999999999999999999999999998 568999999999999999999999999999 448 999999985
Q ss_pred -------------ceeeeecCCCC--ceeccCceeeeccccccccccCCC----------------------CCCceecC
Q 012909 154 -------------AVAMLIGPDAP--IAFESKLRGSHMSHAYDFYKPNLA----------------------SEYPVVDG 196 (453)
Q Consensus 154 -------------AvA~Ll~~~~~--l~~~~~~~~~~~~~~~df~~p~~~----------------------~~~~~vdG 196 (453)
|+|+||++.+. ..+.....+.+.. ....|.++ ..+..++|
T Consensus 157 ~~d~~~~~lFGDGAaA~vl~~~~~~~~~~~~~~~~~~~~---~~~~p~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 233 (353)
T PRK12880 157 PKNMNLAPIFGDGVSATLIEKTDFNEAFFELGSDGKYFD---KLIIPKGAMRIPKADIFNDDSLMQTEEFRQLENLYMDG 233 (353)
T ss_pred cccCCceeeecccceEEEEEecCCCCceEEEEecCCCCC---eEEecCCCcCCCccccccccccccccccccCceEEEcC
Confidence 88999986532 0010000011000 01111100 01234677
Q ss_pred cchHHHHHHHHHHHHHHHHHHHhhhhcCCCCccCccEEEecCcchHHHHHHHHhhhhhhhhccCCchhhHHhhhccCCCC
Q 012909 197 KLSQTCYLMALDSCYKYFCQKFEKLEGRQFSMLDVDYFVFHSPYNKLVQKSFARLFFNDFLRNASSVDEIAKEKLAPYST 276 (453)
Q Consensus 197 ~~s~~~y~~al~~~~~~~~~~~~~~~~~~~~~~d~d~~v~H~p~~km~~ka~~~l~~~~~~~~~~~~~~~~~~~l~~~l~ 276 (453)
+.....+...+..+.+.++++. |++.+|||+|++||++.+|++. +.+.++
T Consensus 234 ~~v~~~~~~~~~~~i~~~L~~~------gl~~~did~~v~HQ~~~~i~~~------------------------i~~~Lg 283 (353)
T PRK12880 234 ANIFNMALECEPKSFKEILEFS------KVDEKDIAFHLFHQSNAYLVDC------------------------IKEELK 283 (353)
T ss_pred HHHHHHHHHHHHHHHHHHHHHc------CCCHHHCCEEEECCCCHHHHHH------------------------HHHHhC
Confidence 7775555555555555555544 6889999999999999999887 445668
Q ss_pred CCccccccchhHHHHHHHHHHHHhhhhcCCCcccccccCccccchHHHHHHHHHhhcCcCCCCCEEEEEEecchhhheee
Q 012909 277 LSDVESYQSRDLEKASQQVAKQLYDLKVQPSTLIPKQVGNMYTASLYAAFASLLHEKHSSLEGKRVIMFSYGSGLTATMF 356 (453)
Q Consensus 277 l~~e~~~~~~~~~k~~~~~~~~~~~~~~~~s~~~~~~~GN~~taSl~l~L~sll~~~~~~~~Gd~ill~syGsG~~~~~~ 356 (453)
++++ |.... +.+++|||+|+|+|++|..++++ +++ +++|.+||+|++|++.
T Consensus 284 l~~e---------k~~~~---------------~l~~~GNtssasip~~L~~~~~~-~~~----~~ll~~~G~G~s~g~~ 334 (353)
T PRK12880 284 LNDD---------KVPNF---------------IMEKYANLSACSLPALLCELDTP-KEF----KASLSAFGAGLSWGSA 334 (353)
T ss_pred CCHH---------Hhhhh---------------hHHhhCCHHHHHHHHHHHHHHHc-CCc----EEEEEEEchhhhheEe
Confidence 8876 33221 23799999999999999999976 443 5999999999999999
Q ss_pred EEEEec
Q 012909 357 SLQLQE 362 (453)
Q Consensus 357 ~l~~~~ 362 (453)
+++|.+
T Consensus 335 ll~~~~ 340 (353)
T PRK12880 335 VLNFKD 340 (353)
T ss_pred EEEECC
Confidence 999976
No 17
>TIGR00747 fabH 3-oxoacyl-(acyl-carrier-protein) synthase III. Active site residues include Cys112, His244 and Asn274 of E. coli FabH. Cys-112 is the site of acyl group attachment.
Probab=100.00 E-value=1.4e-39 Score=326.16 Aligned_cols=289 Identities=20% Similarity=0.243 Sum_probs=229.3
Q ss_pred ceeEEeEEEEEcCCceechhHHhhhhCCCcCee--eEcccceEEeccCCCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEE
Q 012909 7 KNVGILALDIYFPPTCVLQEALEVHDGVSKGKY--TVGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEV 84 (453)
Q Consensus 7 ~~vgI~~i~~y~P~~~v~~~~l~~~~g~~~~k~--~~Gig~r~~av~~~~ed~~~la~~Aa~~aL~~agi~~~~Id~li~ 84 (453)
|.++|.++++|+|+++++++++++..+.+..++ +.|+.+|+ ++.+++++.+|+.+|++++|+++|++|++||.|++
T Consensus 1 ~~~~I~~i~~~~P~~~~~~~~~~~~~~~~~~~i~~~~gi~~r~--~~~~~~~~~~la~~A~~~al~~agl~~~~Id~~i~ 78 (318)
T TIGR00747 1 MYAGILGTGSYLPEKVLTNADLEKMVDTSDEWIVTRTGIKERR--IAADDETSSTMGFEAAKRAIENAGISKDDIDLIIV 78 (318)
T ss_pred CCCEEEEEEEECCCceecHHHHHHhcCCchHHeecccCceEEE--ECCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEE
Confidence 469999999999999999999999988766666 34555554 56789999999999999999999999999999999
Q ss_pred EcccCCCCCccHHHHHHHHhcccCCCCeeEEeeCCcChhHHHHHHHHHHHHHhCCCCCCeEEEEEeecc-----------
Q 012909 85 GSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDTA----------- 153 (453)
Q Consensus 85 ~t~s~~~~~~~~a~~l~~~Lgl~G~~~~~~~dv~~aC~gg~~AL~~A~~~v~sg~~~~~~aLVv~~d~~----------- 153 (453)
+++++....|+.+.++++.||+ ++++++++.++|++++.||+.|.++|++|.. +++|||++|.+
T Consensus 79 ~~~~~~~~~~~~a~~l~~~lGl---~~~~~~~v~~~C~s~~~al~~A~~~i~~g~~--~~~Lvv~~e~~~~~~~~~~~~~ 153 (318)
T TIGR00747 79 ATTTPDHAFPSAACMVQAYLGI---KGIPAFDLSAACAGFIYALSVAKQYIESGKY--KTVLVVGAEKLSSTLDWTDRGT 153 (318)
T ss_pred ECCCCCCCCChHHHHHHHHhCC---CCCcEeehhhhhHHHHHHHHHHHHHHHcCCC--CEEEEEEehhhcCcCCcCCCCe
Confidence 9998887788999999999998 5688999999999999999999999999965 99999999985
Q ss_pred -------ceeeeecCCCC-ceeccCceeeecc-cccc-ccccCC------CCCCceecCcchHHHHHHHHHHHHHHHHHH
Q 012909 154 -------AVAMLIGPDAP-IAFESKLRGSHMS-HAYD-FYKPNL------ASEYPVVDGKLSQTCYLMALDSCYKYFCQK 217 (453)
Q Consensus 154 -------AvA~Ll~~~~~-l~~~~~~~~~~~~-~~~d-f~~p~~------~~~~~~vdG~~s~~~y~~al~~~~~~~~~~ 217 (453)
|+|+||++++. ..+.. .. .++. ...| ++.|.. ...+..+++......+.+.+.++.+.++++
T Consensus 154 ~~~~GDGAaA~lL~~~~~~~~i~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 231 (318)
T TIGR00747 154 CVLFGDGAGAVVLGESEDPGGIIS-TH-LGADGTQGEALYLPAGGRPTSGPSPFITMEGNEVFKHAVRKMGDVVEETLEA 231 (318)
T ss_pred EEEEecceeEEEEeecCCCCcEEE-EE-EEEcCCCcceEEECCCCcCCCCCCCceEECCHHHHHHHHHHHHHHHHHHHHH
Confidence 88999988753 11110 00 1111 1122 122221 122345566666555666666666665554
Q ss_pred HhhhhcCCCCccCccEEEecCcchHHHHHHHHhhhhhhhhccCCchhhHHhhhccCCCCCCccccccchhHHHHHHHHHH
Q 012909 218 FEKLEGRQFSMLDVDYFVFHSPYNKLVQKSFARLFFNDFLRNASSVDEIAKEKLAPYSTLSDVESYQSRDLEKASQQVAK 297 (453)
Q Consensus 218 ~~~~~~~~~~~~d~d~~v~H~p~~km~~ka~~~l~~~~~~~~~~~~~~~~~~~l~~~l~l~~e~~~~~~~~~k~~~~~~~ 297 (453)
. ++.++|||+|++|+++.+++++ +++.+|++.++ .+.++
T Consensus 232 ~------g~~~~di~~~~~h~~~~~~~~~------------------------~~~~lgi~~~k---------~~~~~-- 270 (318)
T TIGR00747 232 N------GLDPEDIDWFVPHQANLRIIEA------------------------LAKRLELDMSQ---------VVKTV-- 270 (318)
T ss_pred c------CCCHHHCCEEEECCCCHHHHHH------------------------HHHHcCCCHHH---------eeehH--
Confidence 4 5889999999999999999877 34566888762 32222
Q ss_pred HHhhhhcCCCcccccccCccccchHHHHHHHHHhhcCcCCCCCEEEEEEecchhhheeeEEEE
Q 012909 298 QLYDLKVQPSTLIPKQVGNMYTASLYAAFASLLHEKHSSLEGKRVIMFSYGSGLTATMFSLQL 360 (453)
Q Consensus 298 ~~~~~~~~~s~~~~~~~GN~~taSl~l~L~sll~~~~~~~~Gd~ill~syGsG~~~~~~~l~~ 360 (453)
+++||++++|++++|++++++ +.+.+||+|++++||+|+++++.+++|
T Consensus 271 --------------~~~Gn~~sas~~~~L~~~~~~-~~~~~Gd~vll~~~G~G~t~~~~~l~~ 318 (318)
T TIGR00747 271 --------------HKYGNTSAASIPLALDELLRT-GRIKPGDLLLLVAFGGGLTWGAALVRF 318 (318)
T ss_pred --------------hhhCCHHHHHHHHHHHHHHHc-CCCCCCCEEEEEEEehhheeeEEEEEC
Confidence 689999999999999999998 788999999999999999999999986
No 18
>PLN02326 3-oxoacyl-[acyl-carrier-protein] synthase III
Probab=100.00 E-value=2.5e-39 Score=331.88 Aligned_cols=290 Identities=14% Similarity=0.172 Sum_probs=219.8
Q ss_pred ceeEEeEEEEEcCCceechhHHhhhhCCCcCee--eEcccceEEeccCCCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEE
Q 012909 7 KNVGILALDIYFPPTCVLQEALEVHDGVSKGKY--TVGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEV 84 (453)
Q Consensus 7 ~~vgI~~i~~y~P~~~v~~~~l~~~~g~~~~k~--~~Gig~r~~av~~~~ed~~~la~~Aa~~aL~~agi~~~~Id~li~ 84 (453)
++++|.+++.|+|++.++++++.+..+.+++++ ++||.+|+ ++.++++..+|+++|+++||+++|++|+|||.||+
T Consensus 46 ~~~~I~g~g~~lP~~~v~n~el~~~~~~~~~~i~~~tGi~~R~--~~~~~~~~~~La~~Aa~~aL~~agi~~~dId~li~ 123 (379)
T PLN02326 46 SGSKLVGCGSAVPKLLITNDDLSKLVDTSDEWIATRTGIRNRR--VLSGDETLTSLAVEAAKKALEMAGVDPEDVDLVLL 123 (379)
T ss_pred CCcEEEEEEEECCCceecHHHHHHhcCCchhheecccCcceEe--ecCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEE
Confidence 579999999999999999999999998777776 45666655 44788999999999999999999999999999999
Q ss_pred EcccCCCCCccHHHHHHHHhcccCCCCeeEEeeCCcChhHHHHHHHHHHHHHhCCCCCCeEEEEEeecc-----------
Q 012909 85 GSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDTA----------- 153 (453)
Q Consensus 85 ~t~s~~~~~~~~a~~l~~~Lgl~G~~~~~~~dv~~aC~gg~~AL~~A~~~v~sg~~~~~~aLVv~~d~~----------- 153 (453)
+|+++++. ++.+.+|++.||+ .+++++|+.++|+|++.||++|..+|++|.. ++||||++|.+
T Consensus 124 ~s~~~~~~-~~~a~~v~~~LG~---~~~~~~dv~~~Ca~~~~aL~~A~~~l~~g~~--~~vLVv~~e~~s~~~~~~d~~~ 197 (379)
T PLN02326 124 CTSSPDDL-FGSAPQVQAALGC---TNALAFDLTAACSGFVLGLVTAARFIRGGGY--KNVLVIGADALSRYVDWTDRGT 197 (379)
T ss_pred EeCCCCcc-CcHHHHHHHHhCC---CCCceeeccccchHHHHHHHHHHHHHHcCCC--CEEEEEEechhcCCCCccccCc
Confidence 99888764 4678999999998 5899999999999999999999999999954 99999999985
Q ss_pred -------ceeeeecCCCC----c-eeccCceeeecccc----ccc-----cccC----------CCCCCceecCcchHHH
Q 012909 154 -------AVAMLIGPDAP----I-AFESKLRGSHMSHA----YDF-----YKPN----------LASEYPVVDGKLSQTC 202 (453)
Q Consensus 154 -------AvA~Ll~~~~~----l-~~~~~~~~~~~~~~----~df-----~~p~----------~~~~~~~vdG~~s~~~ 202 (453)
|+|+||++.+. + .+.....+.+.... .+. ..|. .+..+..++|+.....
T Consensus 198 ~~lfGDGAaAvlL~~~~~~~~~i~~~~~~t~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~ 277 (379)
T PLN02326 198 CILFGDGAGAVVLQACDDDEDGLLGFDMHSDGNGHKHLHATFKGEDDDSSGGNTNGVGDFPPKKASYSCIQMNGKEVFKF 277 (379)
T ss_pred eEEEcceeEEEEEEEcCCCCCceEEEEEEEcCCCCCeEEecCCCCcccccccccccccccccccccccceEecCHHHHHH
Confidence 88999987642 1 11100000000000 000 0000 0001123455444222
Q ss_pred HHHHHHHHHHHHHHHHhhhhcCCCCccCccEEEecCcchHHHHHHHHhhhhhhhhccCCchhhHHhhhccCCCCCCcccc
Q 012909 203 YLMALDSCYKYFCQKFEKLEGRQFSMLDVDYFVFHSPYNKLVQKSFARLFFNDFLRNASSVDEIAKEKLAPYSTLSDVES 282 (453)
Q Consensus 203 y~~al~~~~~~~~~~~~~~~~~~~~~~d~d~~v~H~p~~km~~ka~~~l~~~~~~~~~~~~~~~~~~~l~~~l~l~~e~~ 282 (453)
....+..+.+.++ ++++++.+|||+|++||++.++++. +.+.+|+++++
T Consensus 278 ~~~~~~~~i~~~L------~~~gl~~~dId~~v~Hq~n~~~~~~------------------------~~~~Lgl~~ek- 326 (379)
T PLN02326 278 AVRCVPQVIESAL------QKAGLTAESIDWLLLHQANQRIIDA------------------------VAQRLGIPPEK- 326 (379)
T ss_pred HHHHHHHHHHHHH------HHcCCCHHHCCEEEECCCCHHHHHH------------------------HHHHcCCCHHH-
Confidence 2222223333333 4457999999999999999999876 44567888762
Q ss_pred ccchhHHHHHHHHHHHHhhhhcCCCcccccccCccccchHHHHHHHHHhhcCcCCCCCEEEEEEecchhhheeeEEEE
Q 012909 283 YQSRDLEKASQQVAKQLYDLKVQPSTLIPKQVGNMYTASLYAAFASLLHEKHSSLEGKRVIMFSYGSGLTATMFSLQL 360 (453)
Q Consensus 283 ~~~~~~~k~~~~~~~~~~~~~~~~s~~~~~~~GN~~taSl~l~L~sll~~~~~~~~Gd~ill~syGsG~~~~~~~l~~ 360 (453)
+..+ .+++|||++||+|++|.+++++ +++++||+|+|++||+|++|++.+++|
T Consensus 327 --------~~~~----------------l~~~GNt~sAsi~~~L~~~~~~-g~~~~Gd~vll~~~G~G~t~~~~ll~~ 379 (379)
T PLN02326 327 --------VISN----------------LANYGNTSAASIPLALDEAVRS-GKVKKGDVIATAGFGAGLTWGSAIVRW 379 (379)
T ss_pred --------eeec----------------HhhcCcHHHHHHHHHHHHHHHc-CCCCCCCEEEEEEEChhheeeEEEEEC
Confidence 2222 2799999999999999999998 788999999999999999999999876
No 19
>cd00830 KAS_III Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems. It is found in bacteria and plants. Elongation of fatty acids in the type II systems occurs by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. KASIII initiates this process by specifically using acetyl-CoA over acyl-CoA.
Probab=100.00 E-value=2.9e-39 Score=323.50 Aligned_cols=286 Identities=20% Similarity=0.233 Sum_probs=227.1
Q ss_pred eeEEeEEEEEcCCceechhHHhhhhCCCcCeeeEcccceEEeccCCCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEEcc
Q 012909 8 NVGILALDIYFPPTCVLQEALEVHDGVSKGKYTVGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSE 87 (453)
Q Consensus 8 ~vgI~~i~~y~P~~~v~~~~l~~~~g~~~~k~~~Gig~r~~av~~~~ed~~~la~~Aa~~aL~~agi~~~~Id~li~~t~ 87 (453)
+++|.+++.|+|+++++++++.+..+.+.+++....|.+++.++.+++++.+|+.+|++++|+++|+++++||.|+++|+
T Consensus 1 ~~~I~~i~~~lP~~~~~~~~~~~~~~~~~~~~~~~~Gi~~r~~~~~~~~~~~la~~A~~~al~~ag~~~~~Id~li~~~~ 80 (320)
T cd00830 1 NARILGIGSYLPERVVTNDELEKRLDTSDEWIRTRTGIRERRIADPGETTSDLAVEAAKKALEDAGIDADDIDLIIVATS 80 (320)
T ss_pred CCEEEEEEEECCCcEEcHHHHHHHcCCCHHHhhhccCceEEeeCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcC
Confidence 58999999999999999999999998887777433444444455778999999999999999999999999999999999
Q ss_pred cCCCCCccHHHHHHHHhcccCCCCeeEEeeCCcChhHHHHHHHHHHHHHhCCCCCCeEEEEEeecc--------------
Q 012909 88 TVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDTA-------------- 153 (453)
Q Consensus 88 s~~~~~~~~a~~l~~~Lgl~G~~~~~~~dv~~aC~gg~~AL~~A~~~v~sg~~~~~~aLVv~~d~~-------------- 153 (453)
++.+..|+.+.+|++.||+ ++++++++.++|++++.||..|.++|++|.. ++||||++|.+
T Consensus 81 ~~~~~~~~~~~~l~~~lg~---~~~~~~~v~~~C~s~~~al~~A~~~i~~g~~--~~vLvv~~e~~s~~~~~~~~~~~~~ 155 (320)
T cd00830 81 TPDYLFPATACLVQARLGA---KNAAAFDINAACSGFLYGLSTAAGLIRSGGA--KNVLVVGAETLSRILDWTDRSTAVL 155 (320)
T ss_pred CCCCCCCcHHHHHHHHhCC---CCCcEeeccccchHHHHHHHHHHHHHHcCCC--CEEEEEEehhhccccCcccCCceEE
Confidence 9887789999999999998 4889999999999999999999999999954 99999999975
Q ss_pred ----ceeeeecCCCCceeccCceeeecccc---ccc-cccCCC-----------CCCceecCcchHHHHHHHHHHHHHHH
Q 012909 154 ----AVAMLIGPDAPIAFESKLRGSHMSHA---YDF-YKPNLA-----------SEYPVVDGKLSQTCYLMALDSCYKYF 214 (453)
Q Consensus 154 ----AvA~Ll~~~~~l~~~~~~~~~~~~~~---~df-~~p~~~-----------~~~~~vdG~~s~~~y~~al~~~~~~~ 214 (453)
|+|+||++.+. ..++.++.+... .|. ..|..+ ..+..++++.....+.+.+..+++.+
T Consensus 156 ~GDgAaA~ll~~~~~---~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 232 (320)
T cd00830 156 FGDGAGAVVLEATEE---DPGILDSVLGSDGSGADLLTIPAGGSRSPFEDAEGGDPYLVMDGREVFKFAVRLMPESIEEA 232 (320)
T ss_pred EeccceEEEEEecCC---CCcEEEEEEEEcCCCCCeEEeCCCCcCCccccccccCccEEEcChHHHHHHHHhhHHHHHHH
Confidence 89999988753 011222221111 111 111111 12334667776666666666676666
Q ss_pred HHHHhhhhcCCCCccCccEEEecCcchHHHHHHHHhhhhhhhhccCCchhhHHhhhccCCCCCCccccccchhHHHHHHH
Q 012909 215 CQKFEKLEGRQFSMLDVDYFVFHSPYNKLVQKSFARLFFNDFLRNASSVDEIAKEKLAPYSTLSDVESYQSRDLEKASQQ 294 (453)
Q Consensus 215 ~~~~~~~~~~~~~~~d~d~~v~H~p~~km~~ka~~~l~~~~~~~~~~~~~~~~~~~l~~~l~l~~e~~~~~~~~~k~~~~ 294 (453)
+++. +++++|||+|++||++.+++++ +.+.+|++.+ |...+
T Consensus 233 l~~~------g~~~~di~~~~~h~~~~~~~~~------------------------~~~~lgl~~~---------~~~~~ 273 (320)
T cd00830 233 LEKA------GLTPDDIDWFVPHQANLRIIEA------------------------VAKRLGLPEE---------KVVVN 273 (320)
T ss_pred HHHc------CCCHHHCCEEEECCCCHHHHHH------------------------HHHHhCCCHH---------Hhhhh
Confidence 6554 5889999999999999999877 3345678776 33322
Q ss_pred HHHHHhhhhcCCCcccccccCccccchHHHHHHHHHhhcCcCCCCCEEEEEEecchhhheeeE
Q 012909 295 VAKQLYDLKVQPSTLIPKQVGNMYTASLYAAFASLLHEKHSSLEGKRVIMFSYGSGLTATMFS 357 (453)
Q Consensus 295 ~~~~~~~~~~~~s~~~~~~~GN~~taSl~l~L~sll~~~~~~~~Gd~ill~syGsG~~~~~~~ 357 (453)
+ +++||++++|+|++|.+++++ +++++|++|+|++||+|+++++.+
T Consensus 274 ~----------------~~~Gn~~sas~~~~L~~~~~~-~~~~~G~~vll~~~G~G~~~~~~l 319 (320)
T cd00830 274 L----------------DRYGNTSAASIPLALDEAIEE-GKLKKGDLVLLLGFGAGLTWGAAL 319 (320)
T ss_pred H----------------HhhCcHHHHHHHHHHHHHHHc-CCCCCCCEEEEEEEchHHhhHHhh
Confidence 3 799999999999999999998 788899999999999999998764
No 20
>PRK06840 hypothetical protein; Validated
Probab=100.00 E-value=7.7e-39 Score=323.70 Aligned_cols=292 Identities=16% Similarity=0.142 Sum_probs=220.2
Q ss_pred CceeEEeEEEEEcCCceechhHHhhhhCCCcCeeeEcccceEEeccCCCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEE
Q 012909 6 PKNVGILALDIYFPPTCVLQEALEVHDGVSKGKYTVGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVG 85 (453)
Q Consensus 6 ~~~vgI~~i~~y~P~~~v~~~~l~~~~g~~~~k~~~Gig~r~~av~~~~ed~~~la~~Aa~~aL~~agi~~~~Id~li~~ 85 (453)
+|+|+|.++++|+|++.|+++++++..|.+.+++....|.+++.++.++++..+|+++|++++|+++|++|++||.||++
T Consensus 2 ~~~v~I~~~~~~lP~~~v~~~~l~~~~g~~~~~~~~~~Gi~~r~~~~~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~ 81 (339)
T PRK06840 2 EMNVGIVGTGVYLPKDVMTAEEIAEKTGIPEEVVIEKFGIYEKPVPGPEDHTSDMAIAAAKPALKQAGVDPAAIDVVIYI 81 (339)
T ss_pred CCceEEEEEEEeCCCcccCHHHHHHHhCCCHHHHhhhcCcceEeeCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEe
Confidence 47899999999999999999999999998887774334444444557889999999999999999999999999999977
Q ss_pred cc-cCCCCCccHHHHHHHHhcccCCCCeeEEeeCCcChhHHHHHHHHHHHHHh-CCCCCCeEEEEEeecc----------
Q 012909 86 SE-TVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCVNWVES-ASWDGRYGLVVCTDTA---------- 153 (453)
Q Consensus 86 t~-s~~~~~~~~a~~l~~~Lgl~G~~~~~~~dv~~aC~gg~~AL~~A~~~v~s-g~~~~~~aLVv~~d~~---------- 153 (453)
++ ++++..|+.+.+|++.||+ ++++++++.++|+|++.||..|.++|++ |.. +++|||++|..
T Consensus 82 ~~~~~~~~~p~~a~~l~~~lGl---~~~~~~~v~~~C~~~~~al~~A~~~l~~~g~~--~~~Lvv~~~~~s~~~~~~~~~ 156 (339)
T PRK06840 82 GSEHKDYPVWSSAPKIQHEIGA---KNAWAFDIMAVCASFPIALKVAKDLLYSDPSI--ENVLLVGGYRNSDLVDYDNPR 156 (339)
T ss_pred ccCCCCCCCCchHHHHHHHhCC---CCcccccccccchHHHHHHHHHHHHHhcCCCc--cEEEEEeecccccccCcCCCC
Confidence 65 4555688999999999998 5788999999999999999999999999 755 89999997753
Q ss_pred ----------ceeeeecCCCCceeccCceeeeccc----cccccccCCCCCCc-------------eecCcchHHHHH--
Q 012909 154 ----------AVAMLIGPDAPIAFESKLRGSHMSH----AYDFYKPNLASEYP-------------VVDGKLSQTCYL-- 204 (453)
Q Consensus 154 ----------AvA~Ll~~~~~l~~~~~~~~~~~~~----~~df~~p~~~~~~~-------------~vdG~~s~~~y~-- 204 (453)
|+|+||++++.- .++.++.... ...+..|.++...| .+++.......+
T Consensus 157 ~~~~~~~GDgAaA~ll~~~~~~---~~il~~~~~t~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (339)
T PRK06840 157 TRFMFNFAAGGSAALLKKDAGK---NRILGSAIITDGSFSEDVRVPAGGTKQPASPETVENRQHYLDVIDPESMKERLDE 233 (339)
T ss_pred eeeeccCCCceeEEEEEecCCC---CceEEEEEEEcCCccceEEecCCCcCCCCcccccccccceEEEcCcHHHHHHhHh
Confidence 889999887531 1111111111 11122232221111 112222221111
Q ss_pred ---HHHHHHHHHHHHHHhhhhcCCCCccCccEEEecCcchHHHHHHHHhhhhhhhhccCCchhhHHhhhccCCCCCCccc
Q 012909 205 ---MALDSCYKYFCQKFEKLEGRQFSMLDVDYFVFHSPYNKLVQKSFARLFFNDFLRNASSVDEIAKEKLAPYSTLSDVE 281 (453)
Q Consensus 205 ---~al~~~~~~~~~~~~~~~~~~~~~~d~d~~v~H~p~~km~~ka~~~l~~~~~~~~~~~~~~~~~~~l~~~l~l~~e~ 281 (453)
..+..+.+.++ .++|++++|||++++||++.++++. +.+.+++++++
T Consensus 234 ~~~~~~~~~i~~~L------~~~gl~~~did~~~~h~~~~~~~~~------------------------~~~~Lgl~~~~ 283 (339)
T PRK06840 234 VSIPNFLKVIREAL------RKSGYTPKDIDYLAILHMKRSAHIA------------------------LLEGLGLTEEQ 283 (339)
T ss_pred hHHHHHHHHHHHHH------HHcCCCHHHCCEEEECCcCHHHHHH------------------------HHHHcCCCHHH
Confidence 12223333343 4457999999999999999998765 34567888762
Q ss_pred cccchhHHHHHHHHHHHHhhhhcCCCcccccccCccccchHHHHHHHHHhhcCcCCCCCEEEEEEecchhhheeeEEEEe
Q 012909 282 SYQSRDLEKASQQVAKQLYDLKVQPSTLIPKQVGNMYTASLYAAFASLLHEKHSSLEGKRVIMFSYGSGLTATMFSLQLQ 361 (453)
Q Consensus 282 ~~~~~~~~k~~~~~~~~~~~~~~~~s~~~~~~~GN~~taSl~l~L~sll~~~~~~~~Gd~ill~syGsG~~~~~~~l~~~ 361 (453)
. .+.+++|||+++|++++|.+++++ +++++|++|+|+++|+|++|++.+++|+
T Consensus 284 ~--------------------------~~~~~~Gn~~sas~~~~L~~~~~~-~~~~~Gd~ill~~~G~G~s~~~~~l~~~ 336 (339)
T PRK06840 284 A--------------------------IYLDEYGHLGQLDQILSLHLALEQ-GKLKDGDLVVLVSAGTGYTWAATVIRWG 336 (339)
T ss_pred e--------------------------EeHHhccchhhhhHHHHHHHHHHc-CCCCCCCEEEEEEEehhhheeEEEEEec
Confidence 1 023799999999999999999987 7788999999999999999999999997
Q ss_pred c
Q 012909 362 E 362 (453)
Q Consensus 362 ~ 362 (453)
+
T Consensus 337 ~ 337 (339)
T PRK06840 337 P 337 (339)
T ss_pred C
Confidence 5
No 21
>PRK09352 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=4e-38 Score=315.60 Aligned_cols=289 Identities=20% Similarity=0.231 Sum_probs=230.3
Q ss_pred ceeEEeEEEEEcCCceechhHHhhhhCCCcCee--eEcccceEEeccCCCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEE
Q 012909 7 KNVGILALDIYFPPTCVLQEALEVHDGVSKGKY--TVGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEV 84 (453)
Q Consensus 7 ~~vgI~~i~~y~P~~~v~~~~l~~~~g~~~~k~--~~Gig~r~~av~~~~ed~~~la~~Aa~~aL~~agi~~~~Id~li~ 84 (453)
+.|+|.++++|+|+++++++++++..+.+..++ +.|+..++ ++.++++..+|+.+|++++|+++|+++++||.|++
T Consensus 2 ~~v~I~ai~~~lP~~~~~~~~~~~~~~~~~~~i~~~~gi~~r~--~~~~~~~~~~la~~A~~~al~~agl~~~~id~vi~ 79 (319)
T PRK09352 2 MYAKILGTGSYLPERVVTNDDLEKMVDTSDEWIVTRTGIKERR--IAAPDETTSDLATEAAKKALEAAGIDPEDIDLIIV 79 (319)
T ss_pred CceEEEEEEEECCCeEEcHHHHHHHcCCCHHHhhhhcCeEEEE--eCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEE
Confidence 579999999999999999999999988766655 45666665 44788999999999999999999999999999999
Q ss_pred EcccCCCCCccHHHHHHHHhcccCCCCeeEEeeCCcChhHHHHHHHHHHHHHhCCCCCCeEEEEEeecc-----------
Q 012909 85 GSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDTA----------- 153 (453)
Q Consensus 85 ~t~s~~~~~~~~a~~l~~~Lgl~G~~~~~~~dv~~aC~gg~~AL~~A~~~v~sg~~~~~~aLVv~~d~~----------- 153 (453)
+|+++....|+.+.+|+..||+ .+++++++.++|++++.||..|..+|++|.. ++|||+++|.+
T Consensus 80 ~~~~~~~~~~~~~~~i~~~lG~---~~~~~~~v~~~Casg~~al~~A~~~i~~g~~--~~vLvv~~e~~s~~~~~~~~~~ 154 (319)
T PRK09352 80 ATTTPDYAFPSTACLVQARLGA---KNAAAFDLSAACSGFVYALSTADQFIRSGAY--KNVLVIGAEKLSRIVDWTDRST 154 (319)
T ss_pred EcCCCCCCCchHHHHHHHHhCC---CCCcEeeccccchhHHHHHHHHHHHHHcCCC--CEEEEEEehhhccccCcccCCc
Confidence 9998877778899999999998 6788999999999999999999999999955 99999999975
Q ss_pred -------ceeeeecCCCC--c-eeccCceeeeccccccccccCCCCC------CceecCcchHHHHHHHHHHHHHHHHHH
Q 012909 154 -------AVAMLIGPDAP--I-AFESKLRGSHMSHAYDFYKPNLASE------YPVVDGKLSQTCYLMALDSCYKYFCQK 217 (453)
Q Consensus 154 -------AvA~Ll~~~~~--l-~~~~~~~~~~~~~~~df~~p~~~~~------~~~vdG~~s~~~y~~al~~~~~~~~~~ 217 (453)
|+|+||++++. + .++. .+.......+..|..+.. +..++|+.....+...+.++.+.++++
T Consensus 155 ~~~~gDGaaA~ll~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~ 231 (319)
T PRK09352 155 CVLFGDGAGAVVLGASEEPGILSTHL---GSDGSYGDLLYLPGGGSRGPASPGYLRMEGREVFKFAVRELAKVAREALEA 231 (319)
T ss_pred eEEEeccceEEEEEEcCCCCeEEEEE---EEcCCCCCeEEeCCCCCCCCCCCCceEECCHHHHHHHHHHHHHHHHHHHHH
Confidence 88999988752 1 1111 111111111223432221 334567666555666666666666655
Q ss_pred HhhhhcCCCCccCccEEEecCcchHHHHHHHHhhhhhhhhccCCchhhHHhhhccCCCCCCccccccchhHHHHHHHHHH
Q 012909 218 FEKLEGRQFSMLDVDYFVFHSPYNKLVQKSFARLFFNDFLRNASSVDEIAKEKLAPYSTLSDVESYQSRDLEKASQQVAK 297 (453)
Q Consensus 218 ~~~~~~~~~~~~d~d~~v~H~p~~km~~ka~~~l~~~~~~~~~~~~~~~~~~~l~~~l~l~~e~~~~~~~~~k~~~~~~~ 297 (453)
. +++++|||+|++|+++.++++. +++.+++|.++ ...++
T Consensus 232 ~------g~~~~di~~~~~h~~~~~~~~~------------------------~~~~lg~~~~~---------~~~~~-- 270 (319)
T PRK09352 232 A------GLTPEDIDWLVPHQANLRIIDA------------------------TAKKLGLPMEK---------VVVTV-- 270 (319)
T ss_pred c------CCCHHHCCEEEECCCCHHHHHH------------------------HHHHhCCCHHH---------hhhhH--
Confidence 4 5889999999999999998876 34556888762 22222
Q ss_pred HHhhhhcCCCcccccccCccccchHHHHHHHHHhhcCcCCCCCEEEEEEecchhhheeeEEEEe
Q 012909 298 QLYDLKVQPSTLIPKQVGNMYTASLYAAFASLLHEKHSSLEGKRVIMFSYGSGLTATMFSLQLQ 361 (453)
Q Consensus 298 ~~~~~~~~~s~~~~~~~GN~~taSl~l~L~sll~~~~~~~~Gd~ill~syGsG~~~~~~~l~~~ 361 (453)
.++||+++++++++|.+++++ +++++||+|+++|||+|++|++++++|+
T Consensus 271 --------------~~~Gn~~~a~~~~~L~~~~~~-g~~~~Gd~vll~s~G~G~~~~~~ll~~~ 319 (319)
T PRK09352 271 --------------DKYGNTSAASIPLALDEAVRD-GRIKRGDLVLLEGFGGGLTWGAALVRWP 319 (319)
T ss_pred --------------HhhCCHHHHHHHHHHHHHHHc-CCCCCCCEEEEEEEchhheeEEEEEEeC
Confidence 689999999999999999998 7788999999999999999999999985
No 22
>cd00831 CHS_like Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes, also called type III PKSs. PKS generate an array of different products, dependent on the nature of the starter molecule. They share a common chemical strategy, after the starter molecule is loaded onto the active site cysteine, a carboxylative condensation reation extends the polyketide chain. Plant-specific PKS are dimeric iterative PKSs, using coenzyme A esters to deliver substrate to the active site, but they differ in the choice of starter molecule and the number of condensation reactions.
Probab=100.00 E-value=1.3e-38 Score=324.83 Aligned_cols=292 Identities=19% Similarity=0.230 Sum_probs=218.9
Q ss_pred eeEEeEEEEEcCCceechhHHhhhhCC--Cc----------Cee--eEcccceEEeccC-CC------------------
Q 012909 8 NVGILALDIYFPPTCVLQEALEVHDGV--SK----------GKY--TVGLGQDCMAFCS-EV------------------ 54 (453)
Q Consensus 8 ~vgI~~i~~y~P~~~v~~~~l~~~~g~--~~----------~k~--~~Gig~r~~av~~-~~------------------ 54 (453)
.+.|.++++|+|++.++|+++.+..+. +. .++ ++||.+|++..+. .+
T Consensus 1 ~~~I~~~~~~~P~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gI~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (361)
T cd00831 1 AATILAIGTAVPPHRVPQSELVDFYRRLFSSDHLPELKEKLKRLCAKTGIETRYLVLPGGEETYAPRPEMSPSLDERNDI 80 (361)
T ss_pred CcEEEEEEEeCCCCcCCHHHhhHHHHhcCChhhhHHHHHHHHHHHhhcceeEEEEEecCchhhcCCccccCCCcCcchhh
Confidence 367999999999999999999998753 11 333 4799999987642 11
Q ss_pred --CCHHHHHHHHHHHHHHHcCCCcCCcCEEEEEcccCCCCCccHHHHHHHHhcccCCCCeeEEeeC-CcChhHHHHHHHH
Q 012909 55 --EDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDST-NACYGGTAALFNC 131 (453)
Q Consensus 55 --ed~~~la~~Aa~~aL~~agi~~~~Id~li~~t~s~~~~~~~~a~~l~~~Lgl~G~~~~~~~dv~-~aC~gg~~AL~~A 131 (453)
|++.+|+++|++++|+++|++|++||+||++|+++ +..|+.+.+|+++||+ ++++.++|+. +||+|++.||++|
T Consensus 81 ~~~~~~~la~~Aa~~aL~~a~~~~~~Id~li~~s~~~-~~~P~~a~~i~~~lgl--~~~~~~~dv~~~~C~~~~~al~~A 157 (361)
T cd00831 81 ALEEARELAEEAARGALDEAGLRPSDIDHLVVNTSTG-NPTPSLDAMLINRLGL--RPDVKRYNLGGMGCSAGAIALDLA 157 (361)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCHHHCCEEEEECCCC-CCCCCHHHHHHHHhCC--CcccchhccccccchhHHHHHHHH
Confidence 26899999999999999999999999999999887 5689999999999999 5579999998 8999999999999
Q ss_pred HHHHHhCCCCCCeEEEEEeecc----------------------ceeeeecCCCCce--ecc--Cceeeeccccccc---
Q 012909 132 VNWVESASWDGRYGLVVCTDTA----------------------AVAMLIGPDAPIA--FES--KLRGSHMSHAYDF--- 182 (453)
Q Consensus 132 ~~~v~sg~~~~~~aLVv~~d~~----------------------AvA~Ll~~~~~l~--~~~--~~~~~~~~~~~df--- 182 (453)
.++++++. .++||||++|.+ |+|+||++++... ... ...+.++....+.
T Consensus 158 ~~~~~~~~--~~~aLvv~~e~~s~~~~~~d~~~~~~~~~lfGDgaaA~ll~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 235 (361)
T cd00831 158 KDLLEANP--GARVLVVSTELCSLWYRGPDHRSMLVGNALFGDGAAAVLLSNDPRDRRRERPLFELVRAASTLLPDSEDA 235 (361)
T ss_pred HHHHHHCC--CCEEEEEEeecccceeCCCCcHHHhhhhhhccCCceEEEEEcCCCcccccccceeeecccceeeecCCCc
Confidence 99999994 499999999973 8899998875311 000 1112222111111
Q ss_pred --cccCCCCCCceecCcchHHHHHHHHHHHHHHHHHHHhhhhcC--CCCccCccEEEecCcchHHHHHHHHhhhhhhhhc
Q 012909 183 --YKPNLASEYPVVDGKLSQTCYLMALDSCYKYFCQKFEKLEGR--QFSMLDVDYFVFHSPYNKLVQKSFARLFFNDFLR 258 (453)
Q Consensus 183 --~~p~~~~~~~~vdG~~s~~~y~~al~~~~~~~~~~~~~~~~~--~~~~~d~d~~v~H~p~~km~~ka~~~l~~~~~~~ 258 (453)
|++.. ..+....++.....+...+..+++.+++ +. +++.+|||+|++||++.++++.
T Consensus 236 ~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~i~~~L~------~~~~g~~~~did~~~~H~~~~~i~~~------------ 296 (361)
T cd00831 236 MGWHLGE-EGLTFVLSRDVPRLVEKNLERVLRKLLA------RLGIGLFKLAFDHWCVHPGGRAVLDA------------ 296 (361)
T ss_pred eEEEEEc-ceEEEEeChhHHHHHHHHHHHHHHHHhc------cccCCCccccceEEEECCCChHHHHH------------
Confidence 11110 0111222333333344444455554443 34 6889999999999999999876
Q ss_pred cCCchhhHHhhhccCCCCCCccccccchhHHHHHHHHHHHHhhhhcCCCcccccccCccccchHHHHHHHHHhhcCcCCC
Q 012909 259 NASSVDEIAKEKLAPYSTLSDVESYQSRDLEKASQQVAKQLYDLKVQPSTLIPKQVGNMYTASLYAAFASLLHEKHSSLE 338 (453)
Q Consensus 259 ~~~~~~~~~~~~l~~~l~l~~e~~~~~~~~~k~~~~~~~~~~~~~~~~s~~~~~~~GN~~taSl~l~L~sll~~~~~~~~ 338 (453)
+++.+++++++ . .+|+...+++|||+|||+|++|.+++++ +++++
T Consensus 297 ------------v~~~lgl~~~~---------~-------------~~s~~~l~~~GN~~sasi~~~L~~~~~~-g~~~~ 341 (361)
T cd00831 297 ------------VEKALGLSPED---------L-------------EASRMVLRRYGNMSSSSVLYVLAYMEAK-GRVKR 341 (361)
T ss_pred ------------HHHHcCCCHHH---------H-------------HHHHHHHHHhCCchhccHHHHHHHHHHh-CCCCC
Confidence 44567888762 2 2233344899999999999999999998 78889
Q ss_pred CCEEEEEEecchhhheeeEE
Q 012909 339 GKRVIMFSYGSGLTATMFSL 358 (453)
Q Consensus 339 Gd~ill~syGsG~~~~~~~l 358 (453)
|++|+|++||+|+++++.++
T Consensus 342 Gd~vll~~~G~G~s~~~~l~ 361 (361)
T cd00831 342 GDRGLLIAFGPGFTCESAVW 361 (361)
T ss_pred CCEEEEEEEcCCceeeeeeC
Confidence 99999999999999998763
No 23
>PLN03169 chalcone synthase family protein; Provisional
Probab=100.00 E-value=6.1e-38 Score=322.23 Aligned_cols=296 Identities=18% Similarity=0.192 Sum_probs=219.3
Q ss_pred CCceeEEeEEEEEcCCceechhHHhhhh----CCCcCe-------e--eEcccceEEeccCC------------------
Q 012909 5 HPKNVGILALDIYFPPTCVLQEALEVHD----GVSKGK-------Y--TVGLGQDCMAFCSE------------------ 53 (453)
Q Consensus 5 ~~~~vgI~~i~~y~P~~~v~~~~l~~~~----g~~~~k-------~--~~Gig~r~~av~~~------------------ 53 (453)
++..+.|.+|++|+|++.++|+++.+.. +.+..+ + ++||.+|+++.+.+
T Consensus 18 ~~~~~~I~gigt~~P~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~tGI~~R~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (391)
T PLN03169 18 NPGKATILALGKAFPSQLVPQEYLVDGYFRDTKCDDPALKEKLERLCKTTTVKTRYVVMSKEILDKYPELATEGTPTIKQ 97 (391)
T ss_pred CCCCeEEEEEEeeCCCeecCHHHHHHHHHHHhcccCHHHHHHHHHHHHhCCcceeeEeccccchhhCccccccCCCCHHH
Confidence 3567999999999999999999998852 212222 2 37999999865221
Q ss_pred -----CCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEEcccCCCCCccHHHHHHHHhcccCCCCe-eEEeeCCcChhHHHH
Q 012909 54 -----VEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDI-EGVDSTNACYGGTAA 127 (453)
Q Consensus 54 -----~ed~~~la~~Aa~~aL~~agi~~~~Id~li~~t~s~~~~~~~~a~~l~~~Lgl~G~~~~-~~~dv~~aC~gg~~A 127 (453)
+|.+.+||++|+++||+++|++|++||+||++|++ .+..|+.+.+|+++||+ ++.+ +++|+.+||+|+++|
T Consensus 98 r~~~~~e~~~~La~~Aa~~aL~~ag~~~~dId~lI~~t~t-~~~~P~~a~~l~~~LGl--~~~~~~~~d~~~gC~g~~~a 174 (391)
T PLN03169 98 RLDIANEAVTQMAVEASLACIKEWGRPVSDITHLVYVSSS-EARLPGGDLYLAKQLGL--SPDVQRVMLYFLGCSGGVAG 174 (391)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCHHHCCEEEEECcC-CCCCCcHHHHHHHHhCc--CCcceeeecccChhHHHHHH
Confidence 56789999999999999999999999999999986 66799999999999999 5555 589999999999999
Q ss_pred HHHHHHHHHhCCCCCCeEEEEEeecc------------------------ceeeeecCCCCceeccCceeeecccccccc
Q 012909 128 LFNCVNWVESASWDGRYGLVVCTDTA------------------------AVAMLIGPDAPIAFESKLRGSHMSHAYDFY 183 (453)
Q Consensus 128 L~~A~~~v~sg~~~~~~aLVv~~d~~------------------------AvA~Ll~~~~~l~~~~~~~~~~~~~~~df~ 183 (453)
|.+|.++++++. .++||||++|.+ |+|+||++++....+.+....+... .+ +
T Consensus 175 L~~A~~~~~~~~--~~~vLvv~~e~~s~~~~~~~~~~~~d~~~~~lFGDGAaA~vl~~~~~~~~~~~~~~l~~~~-~~-~ 250 (391)
T PLN03169 175 LRVAKDIAENNP--GSRVLLTTSETTILGFRPPSPDRPYDLVGAALFGDGAAAVIIGADPIPVSESPFFELHTAI-QQ-F 250 (391)
T ss_pred HHHHHHHHHhCC--CCeEEEEEEEcChhhccCCCccchhhhhhhhhccCceEEEEEecCCCcccCCcceEEEeee-ee-E
Confidence 999999999994 599999999982 8899998764210000111111100 01 1
Q ss_pred ccCCC---------CCCceecCcchHHHHHHHHHHHHHHHHHHHhhhhcCCCCccCcc--EEEecCcchHHHHHHHHhhh
Q 012909 184 KPNLA---------SEYPVVDGKLSQTCYLMALDSCYKYFCQKFEKLEGRQFSMLDVD--YFVFHSPYNKLVQKSFARLF 252 (453)
Q Consensus 184 ~p~~~---------~~~~~vdG~~s~~~y~~al~~~~~~~~~~~~~~~~~~~~~~d~d--~~v~H~p~~km~~ka~~~l~ 252 (453)
.|... ..+..++|+.........+..+.+.+++ ++|++.+|+| +|++||++.+|++.
T Consensus 251 ip~~~~~~~~~~~~~g~~~~~g~~v~~~~~~~~~~~i~~~L~------~~gl~~~did~~~~v~Hq~n~~il~~------ 318 (391)
T PLN03169 251 LPGTEKTIDGRLTEEGINFKLGRELPQKIEDNIEGFCKKLMK------KAGLVEKDYNDLFWAVHPGGPAILNR------ 318 (391)
T ss_pred cCCCccccCceecCCceEEEECcHHHHHHHHHHHHHHHHHHH------HcCCCCCCCCcceEEecCCCHHHHHH------
Confidence 12110 0122345555544444445555555544 4468888899 99999999999876
Q ss_pred hhhhhccCCchhhHHhhhccCCCCCCccccccchhHHHHHHHHHHHHhhhhcCCCcccccccCccccchHHHHHHHHHhh
Q 012909 253 FNDFLRNASSVDEIAKEKLAPYSTLSDVESYQSRDLEKASQQVAKQLYDLKVQPSTLIPKQVGNMYTASLYAAFASLLHE 332 (453)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~l~~~l~l~~e~~~~~~~~~k~~~~~~~~~~~~~~~~s~~~~~~~GN~~taSl~l~L~sll~~ 332 (453)
+++.||++++ |.. .|+...+++|||+|+|+++.|..++++
T Consensus 319 ------------------v~~~Lgl~~e---------k~~-------------~s~~~l~~~GNtsSasip~~L~~~~~~ 358 (391)
T PLN03169 319 ------------------LEKKLKLAPE---------KLE-------------CSRRALMDYGNVSSNTIVYVLEYMREE 358 (391)
T ss_pred ------------------HHHHcCCCHH---------HHH-------------HHHHHHHHhCCchHhHHHHHHHHHHHh
Confidence 4456788876 222 222334899999999999999999977
Q ss_pred cCcCC---CCCEEEEEEecchhhheeeEEEE
Q 012909 333 KHSSL---EGKRVIMFSYGSGLTATMFSLQL 360 (453)
Q Consensus 333 ~~~~~---~Gd~ill~syGsG~~~~~~~l~~ 360 (453)
++++ +|++++|++||+|++|++.+++|
T Consensus 359 -~~~~~~~~gd~~ll~afG~G~s~~~~ll~~ 388 (391)
T PLN03169 359 -LKKKGEEDEEWGLILAFGPGITFEGILARN 388 (391)
T ss_pred -hcccCCCCCcEEEEEEEcccHhHHHHHHhh
Confidence 4544 68999999999999999999886
No 24
>PRK06816 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=1.2e-37 Score=319.31 Aligned_cols=301 Identities=19% Similarity=0.192 Sum_probs=220.2
Q ss_pred ceeEEeEEEEEcCCceechhHHhhhhCCCcC-------ee--eEcccceEEeccC---CCCCHHHHHHHHHHHHHHHcCC
Q 012909 7 KNVGILALDIYFPPTCVLQEALEVHDGVSKG-------KY--TVGLGQDCMAFCS---EVEDVISMSLTVVTSLLEKYKI 74 (453)
Q Consensus 7 ~~vgI~~i~~y~P~~~v~~~~l~~~~g~~~~-------k~--~~Gig~r~~av~~---~~ed~~~la~~Aa~~aL~~agi 74 (453)
|+|+|.+++.|+|++.|++++++++.+..++ ++ ++||.+|+++.+. +.++..+|+++|++++|+++|+
T Consensus 1 ~~v~I~gig~~lP~~~v~n~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~La~~A~~~aL~~agi 80 (378)
T PRK06816 1 MNVYITSTGAFLPGEPVSNDEMEAYLGLINGKPSRARRIILRNNGIKTRHYALDPEGRPTHSNAQMAAEAIRDLLDDAGF 80 (378)
T ss_pred CCeEEEeeeecCCCCccCHHHHHHHHhhccCCcHHHHHHHHHhCCCceEEEEECCCCCCCCCHHHHHHHHHHHHHHHcCC
Confidence 5799999999999999999999988775322 33 4799999987533 2357899999999999999999
Q ss_pred CcCCcCEEEEEcccCCCCCccHHHHHHHHhcccCCCCeeEEeeCCcChhHHHHHHHHHHHHHhCCCCCCeEEEEEeecc-
Q 012909 75 DPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDTA- 153 (453)
Q Consensus 75 ~~~~Id~li~~t~s~~~~~~~~a~~l~~~Lgl~G~~~~~~~dv~~aC~gg~~AL~~A~~~v~sg~~~~~~aLVv~~d~~- 153 (453)
+|++||.||++|.+++...|+.+..|++.||+ ++++++++.++|+|++.||+.|..+|++|.. ++||||++|++
T Consensus 81 ~~~dId~li~~s~~~~~~~p~~a~~v~~~Lgl---~~~~~~~v~~~Cas~~~al~~A~~~i~sg~~--~~vLvv~~E~~s 155 (378)
T PRK06816 81 SLGDIELLACGTSQPDQLMPGHASMVHGELGA---PPIEVVSSAGVCAAGMMALKYAYLSVKAGES--RNAVATASELAS 155 (378)
T ss_pred CHHHCCEEEEEECCCCcCChHHHHHHHhhCCC---CCCceeeecCcCHHHHHHHHHHHHHHHCCCC--CEEEEEeEccch
Confidence 99999999999999877788889999999998 5678999999999999999999999999955 99999999863
Q ss_pred --------------------------------------ceeeeecCCCC---ceec--cCceeeecccc-----------
Q 012909 154 --------------------------------------AVAMLIGPDAP---IAFE--SKLRGSHMSHA----------- 179 (453)
Q Consensus 154 --------------------------------------AvA~Ll~~~~~---l~~~--~~~~~~~~~~~----------- 179 (453)
|+|+||++.+. +.+. .....++..+.
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fGDGA~A~vl~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~g~~~~ 235 (378)
T PRK06816 156 RWFRASRFEAEEEKLAELEENPEIAFEKDFLRWMLSDGAGAVLLENKPRPDGLSLRIDWIDLRSYAGELPVCMYAGAEKN 235 (378)
T ss_pred hhhhhhhhhhHHHHhhcCcccCCCCCCCCCCCEeeecccEEEEEEecCCCCCceEEEEEEeeecccccCccceecCCccC
Confidence 67888876542 1111 00001111110
Q ss_pred ----ccccccCCCCCCceecCcchHHHHHHHHHHHHH-----HHHHHHhhhhcCCCCccCccEEEecCcchHHHHHHHHh
Q 012909 180 ----YDFYKPNLASEYPVVDGKLSQTCYLMALDSCYK-----YFCQKFEKLEGRQFSMLDVDYFVFHSPYNKLVQKSFAR 250 (453)
Q Consensus 180 ----~df~~p~~~~~~~~vdG~~s~~~y~~al~~~~~-----~~~~~~~~~~~~~~~~~d~d~~v~H~p~~km~~ka~~~ 250 (453)
...|++. ..+.+..+|+..+..+...+.+.+. .+.+.+ ++.|++++|||+|++||++.+|++...++
T Consensus 236 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L---~~~gl~~~DId~~v~Hq~n~~~~~~v~~~ 311 (378)
T PRK06816 236 EDGSLKGWSDY-PPEEAEAASALSLKQDVRLLNENIVVYTIKPLLELV---DKRNLDPDDIDYFLPHYSSEYFREKIVEL 311 (378)
T ss_pred CCCCccCcccC-CHHHHHhccCchHHhHHHHHHHHhHHHHHHHHHHHH---HHcCCChhhCCEEeeCcccHHHHHHHHHH
Confidence 0112211 0011123344333333333322221 111222 45679999999999999999999885543
Q ss_pred hhhhhhhccCCchhhHHhhhccCCCCCCccccccchhHHHHHHHHHHHHhhhhcCCCcccccccCccccchHHHHHHHHH
Q 012909 251 LFFNDFLRNASSVDEIAKEKLAPYSTLSDVESYQSRDLEKASQQVAKQLYDLKVQPSTLIPKQVGNMYTASLYAAFASLL 330 (453)
Q Consensus 251 l~~~~~~~~~~~~~~~~~~~l~~~l~l~~e~~~~~~~~~k~~~~~~~~~~~~~~~~s~~~~~~~GN~~taSl~l~L~sll 330 (453)
|-. ..+|+|+++ .+.++ .++||+++||+|++|++++
T Consensus 312 l~~-------------------~~~gl~~~k---------~~~~~----------------~~~GNt~sAsipi~L~~a~ 347 (378)
T PRK06816 312 LAK-------------------AGFMIPEEK---------WFTNL----------------ATVGNTGSASIYIMLDELL 347 (378)
T ss_pred HHh-------------------ccCCCChhh---------eEEec----------------cccccccchHHHHHHHHHH
Confidence 310 124777763 22222 7999999999999999999
Q ss_pred hhcCcCCCCCEEEEEEecch-hhheeeEEEEe
Q 012909 331 HEKHSSLEGKRVIMFSYGSG-LTATMFSLQLQ 361 (453)
Q Consensus 331 ~~~~~~~~Gd~ill~syGsG-~~~~~~~l~~~ 361 (453)
++ +++++||+|+++++||| +.+++++++|.
T Consensus 348 ~~-g~~~~Gd~vl~~~~~s~~~~~~~~~~~~~ 378 (378)
T PRK06816 348 NS-GRLKPGQKILCFVPESGRFSTAFMLLTVV 378 (378)
T ss_pred Hc-CCCCCCCEEEEEEecccchhheeEEEEEC
Confidence 98 78999999999999988 99999999984
No 25
>cd00827 init_cond_enzymes "initiating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type III and polyketide synthases, type III, which include chalcone synthase and related enzymes. They are characterized by the utlization of CoA substrate primers, as well as the nature of their active site residues.
Probab=100.00 E-value=4.4e-36 Score=301.03 Aligned_cols=288 Identities=36% Similarity=0.540 Sum_probs=216.7
Q ss_pred eeEEeEEEEEcCCceechhHHhhhhCCCcCeeeEcccceEEeccCCCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEEcc
Q 012909 8 NVGILALDIYFPPTCVLQEALEVHDGVSKGKYTVGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSE 87 (453)
Q Consensus 8 ~vgI~~i~~y~P~~~v~~~~l~~~~g~~~~k~~~Gig~r~~av~~~~ed~~~la~~Aa~~aL~~agi~~~~Id~li~~t~ 87 (453)
.|+|.++++|+|+++++++++++.++.+.-...+|+.+|+++ .++++..+|+.+|++++|+++|++|++||.|+++++
T Consensus 1 ~v~I~~i~~~lP~~~v~~~~~~~~~~~~~~~~~~gi~~r~~~--~~~~~~~~l~~~a~~~aL~~ag~~~~~Id~li~~~~ 78 (324)
T cd00827 1 DVGIEAIGAYLPRYRVDNEELAEGLGVDPGKYTTGIGQRHMA--GDDEDVPTMAVEAARRALERAGIDPDDIGLLIVATE 78 (324)
T ss_pred CccEEEEEecCCceeecHHHHHHHhCCCcceeeeecceeEec--CCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcC
Confidence 479999999999999999999999987643446799988876 457899999999999999999999999999999999
Q ss_pred cCCCCCccHHHHHHHHhcccCCCCeeEEeeCCcChhHHHHHHHHHHHHHhCCCCCCeEEEEEeecc--------------
Q 012909 88 TVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDTA-------------- 153 (453)
Q Consensus 88 s~~~~~~~~a~~l~~~Lgl~G~~~~~~~dv~~aC~gg~~AL~~A~~~v~sg~~~~~~aLVv~~d~~-------------- 153 (453)
++....|+.+.+|++.||+ ++++++++.++|+|++.||..|..+|++|.. ++||||++|.+
T Consensus 79 ~~~~~~~~~~~~i~~~lg~---~~~~~~~v~~~C~s~~~al~~A~~~i~~g~~--~~vlvv~~e~~~~~~~~~~~~~~~~ 153 (324)
T cd00827 79 SPIDKGKSAATYLAELLGL---TNAEAFDLKQACYGGTAALQLAANLVESGPW--RYALVVASDIASYLLDEGSALEPTL 153 (324)
T ss_pred CCCCCCccHHHHHHHHcCC---CCCceeehhhhhHHHHHHHHHHHHHHHcCCC--CEEEEEEEHHhhhcccCCCCccccc
Confidence 8887788999999999998 4899999999999999999999999999965 99999999986
Q ss_pred ---ceeeeecCCCCceeccCceeeecccccccc---ccCCCCC-----------CceecC--cchHHHHHHHHHHHHHHH
Q 012909 154 ---AVAMLIGPDAPIAFESKLRGSHMSHAYDFY---KPNLASE-----------YPVVDG--KLSQTCYLMALDSCYKYF 214 (453)
Q Consensus 154 ---AvA~Ll~~~~~l~~~~~~~~~~~~~~~df~---~p~~~~~-----------~~~vdG--~~s~~~y~~al~~~~~~~ 214 (453)
|+|+||++++... ..++..++......++ .+..... ....++ +.....+...+..+.+..
T Consensus 154 gdgaaA~ll~~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (324)
T cd00827 154 GDGAAAMLVSRNPGIL-AAGIVSTHSTSDPGYDFSPYPVMDGGYPKPCKLAYAIRLTAEPAGRAVFEAAHKLIAKVVRKA 232 (324)
T ss_pred cCceEEEEEecCcccc-cCCceeeeeecccccccCccceeccCCCcchhhhhhcceeecCCccchHHHHhHHHHHHHHHH
Confidence 8999998876310 0112222222221111 1100000 011232 222223334444444444
Q ss_pred HHHHhhhhcCCCCccCccEEEecCcch-HHHHHHHHhhhhhhhhccCCchhhHHhhhccCCCCCCccccccchhHHHHHH
Q 012909 215 CQKFEKLEGRQFSMLDVDYFVFHSPYN-KLVQKSFARLFFNDFLRNASSVDEIAKEKLAPYSTLSDVESYQSRDLEKASQ 293 (453)
Q Consensus 215 ~~~~~~~~~~~~~~~d~d~~v~H~p~~-km~~ka~~~l~~~~~~~~~~~~~~~~~~~l~~~l~l~~e~~~~~~~~~k~~~ 293 (453)
+++ .+++ +|+|+|++||++. ++.+.. .+.++++.++
T Consensus 233 l~~------~~~~-~~i~~~~~h~~~~~~~~~~~------------------------~~~l~~~~~~------------ 269 (324)
T cd00827 233 LDR------AGLS-EDIDYFVPHQPNGKKILEAV------------------------AKKLGGPPEK------------ 269 (324)
T ss_pred HHH------cccc-cccceeeccCchHHHHHHHH------------------------HHHccchHhh------------
Confidence 433 3577 8999999999999 887663 3344555431
Q ss_pred HHHHHHhhhhcCCCc-ccccccCccccchHHHHHHHHHhhcCcCCCCCEEEEEEecchhhheeeE
Q 012909 294 QVAKQLYDLKVQPST-LIPKQVGNMYTASLYAAFASLLHEKHSSLEGKRVIMFSYGSGLTATMFS 357 (453)
Q Consensus 294 ~~~~~~~~~~~~~s~-~~~~~~GN~~taSl~l~L~sll~~~~~~~~Gd~ill~syGsG~~~~~~~ 357 (453)
+.++. ...+++||+++||+|++|.+++++ +++++||+|+|+|+|+|+++++++
T Consensus 270 ----------~~~~~~~~~~~~Gn~~sa~~~~~L~~~~~~-~~~~~Gd~vl~~~~G~G~~~~~~~ 323 (324)
T cd00827 270 ----------ASQTRWILLRRVGNMYAASILLGLASLLES-GKLKAGDRVLLFSYGSGFTAEAFV 323 (324)
T ss_pred ----------hccchhhHHHHhCchHHHHHHHHHHHHHhc-CCCCCCCEEEEEEeccchhheecc
Confidence 11111 134899999999999999999998 778899999999999999999875
No 26
>PLN03171 chalcone synthase-like protein; Provisional
Probab=100.00 E-value=3.3e-35 Score=302.57 Aligned_cols=295 Identities=18% Similarity=0.251 Sum_probs=212.7
Q ss_pred eeEEeEEEEEcCCceechhHHhhhh-C--CCcC---------ee--eEcccceEEeccCC--------------------
Q 012909 8 NVGILALDIYFPPTCVLQEALEVHD-G--VSKG---------KY--TVGLGQDCMAFCSE-------------------- 53 (453)
Q Consensus 8 ~vgI~~i~~y~P~~~v~~~~l~~~~-g--~~~~---------k~--~~Gig~r~~av~~~-------------------- 53 (453)
.+.|.++++|+|++.++|+++++.. . .+.+ ++ ++||.+|+++..+.
T Consensus 22 ~~~I~gigt~~P~~~v~n~~~~~~~~~~~~~~~~~~~~~~~~~i~~~tGI~~R~~~~~~~~~~~~~~~~~~~~~~~~~r~ 101 (399)
T PLN03171 22 LAAVLAIGTANPANCVPQDEFPDFYFRATKSDHLTALKDKFKRICQELGVQKRYLHHTEELLSAHPEFLDHDAPSLDARL 101 (399)
T ss_pred CcEEEEEEeeCCCcccCHHHHHHHHHHHhcccccHHHHHHHHHHHHhcCCCceeEeccccccccCccccccCCCCHHHHH
Confidence 4789999999999999999999873 2 1222 23 57999999864220
Q ss_pred ---CCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEEcccCCCCCccHHHHHHHHhcccCCCCe-eEEeeCCcChhHHHHHH
Q 012909 54 ---VEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDI-EGVDSTNACYGGTAALF 129 (453)
Q Consensus 54 ---~ed~~~la~~Aa~~aL~~agi~~~~Id~li~~t~s~~~~~~~~a~~l~~~Lgl~G~~~~-~~~dv~~aC~gg~~AL~ 129 (453)
.|.+.+||++|++++|+++|++|+|||+||++|+|+.+ .|+++.+|+++||+ +..+ +++++.+||+|++.||+
T Consensus 102 ~~~~~~a~~la~~Aa~~aL~~ag~~~~dId~li~~t~t~~~-~P~~a~~v~~~LGl--~~~~~~~~~~~~gC~g~~~aL~ 178 (399)
T PLN03171 102 DIAADAVPELAAEAAKKAIAEWGRPAADITHLVVTTNSGAH-IPGVDFRLVPLLGL--RPSVRRTMLHLNGCFAGAAALR 178 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCC-CCchHHHHHHHhCC--CcccceeeccCCccHHHHHHHH
Confidence 04789999999999999999999999999999999986 79999999999998 4444 36788889999999999
Q ss_pred HHHHHHHhCCCCCCeEEEEEeecc------------------------ceeeeecCCCCc----eeccCceeeeccccc-
Q 012909 130 NCVNWVESASWDGRYGLVVCTDTA------------------------AVAMLIGPDAPI----AFESKLRGSHMSHAY- 180 (453)
Q Consensus 130 ~A~~~v~sg~~~~~~aLVv~~d~~------------------------AvA~Ll~~~~~l----~~~~~~~~~~~~~~~- 180 (453)
+|.++++++. .++||||++|.+ |+|+||++.+.. .++ +...++....
T Consensus 179 ~A~~li~~~~--~~~vLVv~~e~~s~~~~~~d~~~~~~~v~~~LFGDGAaA~vl~~~~~~~~~~~~~--l~~~~~~~~p~ 254 (399)
T PLN03171 179 LAKDLAENNR--GARVLVVAAEITLLLFNGPDEGCFQTLLNQGLFGDGAAAVIVGADADAAERPLFE--IVSAAQAIIPE 254 (399)
T ss_pred HHHHHHHhCC--CCeEEEEEEeccccccCCCCcccHHhhhccccccCccEEEEEecCCCCCCCCceE--EEEeeeEEecC
Confidence 9999999995 499999999995 778888775320 001 1111111111
Q ss_pred -----cccccCCCCCCceecCcchHHHHHHHHHHHHHHHHHHH-hhh--hcCCCCccCccEEEecCcchHHHHHHHHhhh
Q 012909 181 -----DFYKPNLASEYPVVDGKLSQTCYLMALDSCYKYFCQKF-EKL--EGRQFSMLDVDYFVFHSPYNKLVQKSFARLF 252 (453)
Q Consensus 181 -----df~~p~~~~~~~~vdG~~s~~~y~~al~~~~~~~~~~~-~~~--~~~~~~~~d~d~~v~H~p~~km~~ka~~~l~ 252 (453)
.+..+..+ ++++++.......+....+...++. ... ...+++.+|++|+ +||++.+|++.
T Consensus 255 ~~~~~~~~~~~~g-----~~~~~~~~~vp~~i~~~l~~~l~~~l~~~~~~~~g~~~~di~~~-~Hq~~~~il~~------ 322 (399)
T PLN03171 255 SDDAINMHFTEGG-----LDGNIGTRQVPGLIGDNIERCLLDAFAPLLGGDGGAEWNDLFWA-VHPGSSAILDQ------ 322 (399)
T ss_pred CchheEEEEEcCC-----ceEEECchhHHHHHHHHHHHHHHHHHHhhcccccCCCcccceEE-EcCCcHHHHHH------
Confidence 11111111 2334443333344433333333221 000 1235677899887 59999999876
Q ss_pred hhhhhccCCchhhHHhhhccCCCCCCccccccchhHHHHHHHHHHHHhhhhcCCCcccccccCccccchHHHHHHHHHhh
Q 012909 253 FNDFLRNASSVDEIAKEKLAPYSTLSDVESYQSRDLEKASQQVAKQLYDLKVQPSTLIPKQVGNMYTASLYAAFASLLHE 332 (453)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~l~~~l~l~~e~~~~~~~~~k~~~~~~~~~~~~~~~~s~~~~~~~GN~~taSl~l~L~sll~~ 332 (453)
+.+.+|++.+ |.. .|+...+++|||+++|++++|..++++
T Consensus 323 ------------------v~~~Lgl~~e---------k~~-------------~s~~~l~~yGNtssaSip~~L~~~~~~ 362 (399)
T PLN03171 323 ------------------VDAALGLEPE---------KLA-------------ASRRVLSDYGNMFGATVIFALDELRRQ 362 (399)
T ss_pred ------------------HHHHcCCCHH---------HhH-------------HHHHHHHHhCcchhhhHHHHHHHHHhh
Confidence 4456788886 332 222234899999999999999999987
Q ss_pred cCc--CCCC---CEEEEEEecchhhheeeEEEEec
Q 012909 333 KHS--SLEG---KRVIMFSYGSGLTATMFSLQLQE 362 (453)
Q Consensus 333 ~~~--~~~G---d~ill~syGsG~~~~~~~l~~~~ 362 (453)
++ +++| ++|+|++||+|++|++.+++|..
T Consensus 363 -~~~~~~~G~~~d~vll~~fG~Glt~~~~ll~~~~ 396 (399)
T PLN03171 363 -MEEAAAAGAWPELGVMMAFGPGLTVDAMLLHASG 396 (399)
T ss_pred -HhhcCCCCCCcceEEEEEEcccHHHHHHHhhccc
Confidence 43 4677 99999999999999999999864
No 27
>PLN03168 chalcone synthase; Provisional
Probab=100.00 E-value=2.1e-34 Score=295.57 Aligned_cols=294 Identities=16% Similarity=0.216 Sum_probs=208.0
Q ss_pred eeEEeEEEEEcCCceechhHHhhhhCC------Cc---Cee-----eEcccceEEeccCC--------------------
Q 012909 8 NVGILALDIYFPPTCVLQEALEVHDGV------SK---GKY-----TVGLGQDCMAFCSE-------------------- 53 (453)
Q Consensus 8 ~vgI~~i~~y~P~~~v~~~~l~~~~g~------~~---~k~-----~~Gig~r~~av~~~-------------------- 53 (453)
.+.|.+|++..|++.++|+++.++... .+ .++ +.||..|++.++..
T Consensus 15 ~~~i~~i~ta~P~~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~i~~~sgI~~R~~~~~~~~~~~~~~~~~~~~ps~~~r~ 94 (389)
T PLN03168 15 PACVLGIGTAVPPAEFLQSEYPDFFFNITNCGEKEALKAKFKRICDKSGIRKRHMFLTEEVLKANPGICTYMEPSLNVRH 94 (389)
T ss_pred CeEEEEEeccCCCcccCHHHHHHHHHHhccccCcHHHHHHHHHHHHhcCCCeeeeeccccchhhCcccccccCCCHHHHH
Confidence 367999999999999999998887521 11 123 47999999876321
Q ss_pred ---CCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEEcccCCCCCccHHHHHHHHhcccCCCCe-eEEeeCCcChhHHHHHH
Q 012909 54 ---VEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDI-EGVDSTNACYGGTAALF 129 (453)
Q Consensus 54 ---~ed~~~la~~Aa~~aL~~agi~~~~Id~li~~t~s~~~~~~~~a~~l~~~Lgl~G~~~~-~~~dv~~aC~gg~~AL~ 129 (453)
.+.+.+|+++|+++||+++|++++|||+||++|+|+. ..|+++.+|+++||+ ++.+ +++|++.||+|++.||.
T Consensus 95 ~~~~~~a~~La~~Aa~~AL~~ag~~~~dId~lI~~T~Tg~-~~Ps~a~~l~~~LGl--~~~~~r~~d~~~gC~g~~~aL~ 171 (389)
T PLN03168 95 DIVVVQVPKLAAEAAQKAIKEWGGRKSDITHIVFATTSGV-NMPGADHALAKLLGL--KPTVKRVMMYQTGCFGGASVLR 171 (389)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCC-CCccHHHHHHHHhCc--CCcceeeeeeCCccHHHHHHHH
Confidence 0136899999999999999999999999999999995 489999999999999 4554 58999999999999999
Q ss_pred HHHHHHHhCCCCCCeEEEEEeecc------------------------ceeeeecCCCCceeccCceeeecccccccccc
Q 012909 130 NCVNWVESASWDGRYGLVVCTDTA------------------------AVAMLIGPDAPIAFESKLRGSHMSHAYDFYKP 185 (453)
Q Consensus 130 ~A~~~v~sg~~~~~~aLVv~~d~~------------------------AvA~Ll~~~~~l~~~~~~~~~~~~~~~df~~p 185 (453)
+|.++++++ +.++||||++|++ |+|+||++++.-..+.+....+... +...|
T Consensus 172 ~A~~~i~~~--~~~~VLVV~~E~~S~~~~~~~~~~~~~~~~~~LFGDGAaAvvl~~~~~~~~~~~~~~~~~~~--~~~~p 247 (389)
T PLN03168 172 VAKDLAENN--KGARVLAVASEVTAVTYRAPSENHLDGLVGSALFGDGAGVYVVGSDPKPEVEKALFEVHWAG--ETILP 247 (389)
T ss_pred HHHHHHHhC--CCCEEEEEEEehhhhhccCcccccHHHHhccccccCccEEEEEecCCCCccCCcceEEEeee--eEEEc
Confidence 999999999 5599999999985 8888888753210011111111111 01112
Q ss_pred CC-CC-CCce-ecCc---chHH---HHHHHHHHHHHHHHHHHhhhhcCCCCccCccEEEecCcchHHHHHHHHhhhhhhh
Q 012909 186 NL-AS-EYPV-VDGK---LSQT---CYLMALDSCYKYFCQKFEKLEGRQFSMLDVDYFVFHSPYNKLVQKSFARLFFNDF 256 (453)
Q Consensus 186 ~~-~~-~~~~-vdG~---~s~~---~y~~al~~~~~~~~~~~~~~~~~~~~~~d~d~~v~H~p~~km~~ka~~~l~~~~~ 256 (453)
.. +. .+.. ..|. ++.. ...+.+..+.+.+.+ ..+....|+++|++||++.++++.
T Consensus 248 ~s~~~~~~~~~~~g~~~~l~~~vp~~i~~~~~~~l~~~l~------~~~~~~~d~~~~v~Hqgg~~Il~~---------- 311 (389)
T PLN03168 248 ESDGAIDGHLTEAGLIFHLMKDVPGLISKNIEKFLNEARK------CVGSPDWNEMFWAVHPGGPAILDQ---------- 311 (389)
T ss_pred CCCCccCceEecCceEEEECHHHHHHHHHHHHHHHHHHHH------hcCCCccccceEEecCCcHHHHHH----------
Confidence 10 00 0111 1111 1111 122223333333332 234545678999999999999877
Q ss_pred hccCCchhhHHhhhccCCCCCCccccccchhHHHHHHHHHHHHhhhhcCCCcccccccCccccchHHHHHHHHHhhcCcC
Q 012909 257 LRNASSVDEIAKEKLAPYSTLSDVESYQSRDLEKASQQVAKQLYDLKVQPSTLIPKQVGNMYTASLYAAFASLLHEKHSS 336 (453)
Q Consensus 257 ~~~~~~~~~~~~~~l~~~l~l~~e~~~~~~~~~k~~~~~~~~~~~~~~~~s~~~~~~~GN~~taSl~l~L~sll~~~~~~ 336 (453)
+++.|+++++ |.. .|+...+++|||+|||+++.|..++++ ++
T Consensus 312 --------------v~~~Lgl~~e---------k~~-------------~s~~vl~~yGNtSSaSv~~vL~~~~~~--~~ 353 (389)
T PLN03168 312 --------------VEAKLKLTKD---------KMQ-------------GSRDILSEFGNMSSASVLFVLDQIRQR--SV 353 (389)
T ss_pred --------------HHHHcCCCHH---------HHH-------------HHHHHHHHhCccHhhhHHHHHHHHHHH--Hh
Confidence 4556788886 222 233344899999999999999998864 22
Q ss_pred CCC--------CEEEEEEecchhhheeeEEEEec
Q 012909 337 LEG--------KRVIMFSYGSGLTATMFSLQLQE 362 (453)
Q Consensus 337 ~~G--------d~ill~syGsG~~~~~~~l~~~~ 362 (453)
++| ++++|++||+|+++++.+++|..
T Consensus 354 ~~g~~~~~~g~~~~ll~afGpG~t~~~~llr~~~ 387 (389)
T PLN03168 354 KMGASTLGEGSEFGFFIGFGPGLTLEVLVLRAAA 387 (389)
T ss_pred hcCCCCCCCCccEEEEEEEcchhhhhhhhheecc
Confidence 332 89999999999999999999864
No 28
>PLN03172 chalcone synthase family protein; Provisional
Probab=100.00 E-value=6.7e-34 Score=291.78 Aligned_cols=295 Identities=16% Similarity=0.224 Sum_probs=209.7
Q ss_pred eEEeEEEEEcCCceechhHHhhhhC----C-C-c--C-ee-----eEcccceEEeccC---C-C----------------
Q 012909 9 VGILALDIYFPPTCVLQEALEVHDG----V-S-K--G-KY-----TVGLGQDCMAFCS---E-V---------------- 54 (453)
Q Consensus 9 vgI~~i~~y~P~~~v~~~~l~~~~g----~-~-~--~-k~-----~~Gig~r~~av~~---~-~---------------- 54 (453)
+.|.+|++++|++.++|+++.++.. . + + . ++ ..||..|++.+.+ + .
T Consensus 17 ~~I~~igta~P~~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~i~~~sgI~~R~~~~~~~~~~~~~~~~~~~~p~~~~r~~ 96 (393)
T PLN03172 17 ATILAIGKATPANCVSQADYPDYYFRITNSEHMTELKEKFKRMCDKSMIKKRYMHLTEEILKENPNMCAYMAPSLDARQD 96 (393)
T ss_pred eEEEEEEecCCCccccHHHHHHHHHHHhcccCchHHHHHHHHHHHhcCCCceeEeccchhhhhCccccccCCCCHHHHHH
Confidence 6799999999999999999888753 1 1 1 1 12 4799999986621 0 0
Q ss_pred ---CCHHHHHHHHHHHHHHHcCCCcCCcCEEEEEcccCCCCCccHHHHHHHHhcccCCCCee-EEeeCCcChhHHHHHHH
Q 012909 55 ---EDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIE-GVDSTNACYGGTAALFN 130 (453)
Q Consensus 55 ---ed~~~la~~Aa~~aL~~agi~~~~Id~li~~t~s~~~~~~~~a~~l~~~Lgl~G~~~~~-~~dv~~aC~gg~~AL~~ 130 (453)
+...+|+++|+++||+++|++++|||+||++|+|+.+ .|+++.+|+++||+ ++.+. .+++..||+|++.||.+
T Consensus 97 ~~~~~a~~La~~Aa~~aL~~ag~~~~dId~ii~~t~t~~~-~P~~a~~l~~~LGl--~~~~~~~~~~~~gC~g~~~aL~~ 173 (393)
T PLN03172 97 MVVVEVPKLGKEAAAKAIKEWGQPKSKITHLVFCTTSGVD-MPGADYQLTKLLGL--KPSVKRFMMYQQGCFAGGTVLRL 173 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCCc-CchHHHHHHHHhCC--CCCceEEeeeCCchHHHHHHHHH
Confidence 1246999999999999999999999999999999976 89999999999999 56664 57889999999999999
Q ss_pred HHHHHHhCCCCCCeEEEEEeecc------------------------ceeeeecCCCCceec-c--Cceeeec---cccc
Q 012909 131 CVNWVESASWDGRYGLVVCTDTA------------------------AVAMLIGPDAPIAFE-S--KLRGSHM---SHAY 180 (453)
Q Consensus 131 A~~~v~sg~~~~~~aLVv~~d~~------------------------AvA~Ll~~~~~l~~~-~--~~~~~~~---~~~~ 180 (453)
|.++++++ ++++||||++|.+ |+|+||++++.-..+ + .+.++.+ .+..
T Consensus 174 A~~~~~~~--~~~~vLVV~~E~~S~~~~~~~d~~~~~~v~~~LFGDGAaAvVl~~~~~~~~~~~~~~i~~~~~~~~~~t~ 251 (393)
T PLN03172 174 AKDLAENN--AGSRVLVVCSEITAVTFRGPSDTHLDSLVGQALFGDGAAAVIIGADPDTKIERPLFEIVSAAQTILPDSD 251 (393)
T ss_pred HHHHHHcC--CCCeEEEEEEehhhhhhcccccccHHhhhccchhcCceEEEEEecCCCCcccCceeEEeeeccEEecCCc
Confidence 99999999 5599999999986 788888765321000 0 0111111 0000
Q ss_pred cccccCCCCCCceecC---cchHHHHHHHHHHHHHHHHHHHhhhhcCCCCccCccEEEecCcchHHHHHHHHhhhhhhhh
Q 012909 181 DFYKPNLASEYPVVDG---KLSQTCYLMALDSCYKYFCQKFEKLEGRQFSMLDVDYFVFHSPYNKLVQKSFARLFFNDFL 257 (453)
Q Consensus 181 df~~p~~~~~~~~vdG---~~s~~~y~~al~~~~~~~~~~~~~~~~~~~~~~d~d~~v~H~p~~km~~ka~~~l~~~~~~ 257 (453)
+.+. ......| .++...+..+.......+.+.+ ++.+++..|+|+|++||++.++++.
T Consensus 252 ~~~~-----~~i~~~G~~~~l~~~vp~~~~~~i~~~~~~~L---~~~gl~~~di~~~~~Hqgg~~Il~~----------- 312 (393)
T PLN03172 252 GAID-----GHLREVGLTFHLLKDVPGLISKNIEKSLVEAF---APIGINDWNSIFWIAHPGGPAILDQ----------- 312 (393)
T ss_pred cccc-----ceEEcCCcEEEEechHHHHHHHHHHHHHHHHh---hhcCCCccccceEEecCCcHHHHHH-----------
Confidence 0000 0001112 1122222222222222222222 3456778999999999999999877
Q ss_pred ccCCchhhHHhhhccCCCCCCccccccchhHHHHHHHHHHHHhhhhcCCCcccccccCccccchHHHHHHHHHhh---cC
Q 012909 258 RNASSVDEIAKEKLAPYSTLSDVESYQSRDLEKASQQVAKQLYDLKVQPSTLIPKQVGNMYTASLYAAFASLLHE---KH 334 (453)
Q Consensus 258 ~~~~~~~~~~~~~l~~~l~l~~e~~~~~~~~~k~~~~~~~~~~~~~~~~s~~~~~~~GN~~taSl~l~L~sll~~---~~ 334 (453)
+++.|+++++ |+.+|+...+++|||+|+|++++|..+++. .+
T Consensus 313 -------------v~~~Lgl~~~----------------------~~~~s~~vl~~yGNtSSaSv~~vL~~~~~~~~~~g 357 (393)
T PLN03172 313 -------------VEIKLDLKEE----------------------KLRATRHVLSDYGNMSSACVLFILDEMRKKSIEEG 357 (393)
T ss_pred -------------HHHHcCCCHH----------------------HHHHHHHHHHHhCccHHhHHHHHHHHHHhhhhhcC
Confidence 4556688776 233444556899999999999999998742 24
Q ss_pred cCCCC---CEEEEEEecchhhheeeEEEEec
Q 012909 335 SSLEG---KRVIMFSYGSGLTATMFSLQLQE 362 (453)
Q Consensus 335 ~~~~G---d~ill~syGsG~~~~~~~l~~~~ 362 (453)
++++| ++++|++||+|+++++.+++|.+
T Consensus 358 ~~~~G~~~~~~ll~afGpG~t~~~~ll~~~~ 388 (393)
T PLN03172 358 KGSTGEGLEWGVLFGFGPGLTVETVVLHSVP 388 (393)
T ss_pred CCCCCCCcceEEEEEeCCcceeeeeeeEecc
Confidence 55555 88999999999999999999954
No 29
>PLN03170 chalcone synthase; Provisional
Probab=100.00 E-value=2.6e-34 Score=295.70 Aligned_cols=295 Identities=16% Similarity=0.233 Sum_probs=212.4
Q ss_pred eEEeEEEEEcCCceechhHHhhhhCC-------Cc-C-ee-----eEcccceEEeccCC----C----------------
Q 012909 9 VGILALDIYFPPTCVLQEALEVHDGV-------SK-G-KY-----TVGLGQDCMAFCSE----V---------------- 54 (453)
Q Consensus 9 vgI~~i~~y~P~~~v~~~~l~~~~g~-------~~-~-k~-----~~Gig~r~~av~~~----~---------------- 54 (453)
..|.+|++.+|++.++|+++.++... +. . ++ +.||..|++.+.+. .
T Consensus 21 ~~i~~i~ta~P~~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~i~~~sgI~~R~~~~~~~~~~~~~~~~~~~~p~~~~r~~ 100 (401)
T PLN03170 21 ATVLAIGTATPANCVHQADYPDYYFRITKSEHMTELKEKFKRMCDKSQIRKRYMHLTEEYLAENPNMCAYMAPSLDARQD 100 (401)
T ss_pred eEEEEEeecCCCccccHHHHHHHHHHHccccCchhHHHHHHHHHHhCCCCceeEeccccchhhCccccccCCCCHHHHHH
Confidence 67999999999999999998877521 11 1 22 47999998866211 0
Q ss_pred ---CCHHHHHHHHHHHHHHHcCCCcCCcCEEEEEcccCCCCCccHHHHHHHHhcccCCCCe-eEEeeCCcChhHHHHHHH
Q 012909 55 ---EDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDI-EGVDSTNACYGGTAALFN 130 (453)
Q Consensus 55 ---ed~~~la~~Aa~~aL~~agi~~~~Id~li~~t~s~~~~~~~~a~~l~~~Lgl~G~~~~-~~~dv~~aC~gg~~AL~~ 130 (453)
+.+.+||++|+++||+++|++++|||+||++|+|+.+ .|+++.+|+++||+ ++.+ +++++..||+|++.||.+
T Consensus 101 ~~~~~a~~La~~Aa~~AL~~ag~~~~dId~lI~~T~Tg~~-~Ps~a~~l~~~LGl--~~~~~r~~d~~~gC~G~~~aL~~ 177 (401)
T PLN03170 101 IVVVEVPKLGKAAAQKAIKEWGQPKSKITHLVFCTTSGVD-MPGADYQLTKMLGL--RPSVNRLMMYQQGCFAGGTVLRV 177 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCCC-CChHHHHHHHHhCc--CcccHHHHhhcChhHHHHHHHHH
Confidence 1246799999999999999999999999999999976 89999999999998 4554 589999999999999999
Q ss_pred HHHHHHhCCCCCCeEEEEEeecc------------------------ceeeeecCCCCceeccCceeeeccccccccccC
Q 012909 131 CVNWVESASWDGRYGLVVCTDTA------------------------AVAMLIGPDAPIAFESKLRGSHMSHAYDFYKPN 186 (453)
Q Consensus 131 A~~~v~sg~~~~~~aLVv~~d~~------------------------AvA~Ll~~~~~l~~~~~~~~~~~~~~~df~~p~ 186 (453)
|.++++++ +.++||||++|++ |+|+||++++.-.+.... ...........|.
T Consensus 178 A~~l~~~~--~~~~vLVV~~E~~S~~~~~~~~~~~~~~~~~~LFGDGAaAvVl~~~~~~~~~~~~--~~l~~~~~~~~p~ 253 (401)
T PLN03170 178 AKDLAENN--RGARVLVVCSEITAVTFRGPSESHLDSMVGQALFGDGAAAVIVGADPDERVERPL--FQLVSASQTILPD 253 (401)
T ss_pred HHHHHHcC--CCCeEEEEEEehhhhccCCcccchhhhhhhhhhhhceeEEEEEecCCcccccCCc--eEEeeccceEecC
Confidence 99999998 5599999998874 888888876421000000 0000001111221
Q ss_pred CCC--CCc-eecC------cchHHHHHHHHHHHHHHHHHHHhhhhcCCCCccCccEEEecCcchHHHHHHHHhhhhhhhh
Q 012909 187 LAS--EYP-VVDG------KLSQTCYLMALDSCYKYFCQKFEKLEGRQFSMLDVDYFVFHSPYNKLVQKSFARLFFNDFL 257 (453)
Q Consensus 187 ~~~--~~~-~vdG------~~s~~~y~~al~~~~~~~~~~~~~~~~~~~~~~d~d~~v~H~p~~km~~ka~~~l~~~~~~ 257 (453)
... .+. ..+| +.......+.+..+.+.++ .+.|++.+|+++|++||++.++++.
T Consensus 254 ~~~~~~~~i~~~G~~~~l~~~vp~~~~~~i~~~v~~~L------~~~gl~~~di~~~v~Hqgg~~il~~----------- 316 (401)
T PLN03170 254 SEGAIDGHLREVGLTFHLLKDVPGLISKNIERSLEEAF------KPLGITDYNSIFWVAHPGGPAILDQ----------- 316 (401)
T ss_pred CcccccceEEcCCeEEEEehHHHHHHHHHHHHHHHHHH------HhcCCCccccCeEEecCCcHHHHHH-----------
Confidence 100 011 1122 1121222233333334333 3446888999999999999999876
Q ss_pred ccCCchhhHHhhhccCCCCCCccccccchhHHHHHHHHHHHHhhhhcCCCcccccccCccccchHHHHHHHHHh---hcC
Q 012909 258 RNASSVDEIAKEKLAPYSTLSDVESYQSRDLEKASQQVAKQLYDLKVQPSTLIPKQVGNMYTASLYAAFASLLH---EKH 334 (453)
Q Consensus 258 ~~~~~~~~~~~~~l~~~l~l~~e~~~~~~~~~k~~~~~~~~~~~~~~~~s~~~~~~~GN~~taSl~l~L~sll~---~~~ 334 (453)
+++.++++++ |+.+|+.+.+++|||+|+|++++|..+++ +.+
T Consensus 317 -------------v~~~Lgl~~~----------------------~~~~s~~~l~~~GNtsSasv~~vL~~~~~~~~~~g 361 (401)
T PLN03170 317 -------------VEAKVGLEKE----------------------RMRATRHVLSEYGNMSSACVLFILDEMRKRSAEDG 361 (401)
T ss_pred -------------HHHHcCCChH----------------------HHHHHHHHHHHhCccHHhHHHHHHHHHHHhHhhcC
Confidence 4455688876 23334455689999999999999999984 225
Q ss_pred cCCCC---CEEEEEEecchhhheeeEEEEec
Q 012909 335 SSLEG---KRVIMFSYGSGLTATMFSLQLQE 362 (453)
Q Consensus 335 ~~~~G---d~ill~syGsG~~~~~~~l~~~~ 362 (453)
++++| ++++|++||+|+++++.+++|.+
T Consensus 362 ~~~~G~~~~~~ll~afGpG~t~~~~ll~~~~ 392 (401)
T PLN03170 362 QATTGEGFDWGVLFGFGPGLTVETVVLHSVP 392 (401)
T ss_pred CCCCCCCccEEEEEEeCchHhHHhHHheecc
Confidence 66677 89999999999999999999966
No 30
>PRK07515 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=3.1e-33 Score=286.33 Aligned_cols=292 Identities=17% Similarity=0.146 Sum_probs=209.2
Q ss_pred ceeEEeEEEEEcCCceechhHHhhhhCC------------------------CcCee--eEcccceEEeccC--------
Q 012909 7 KNVGILALDIYFPPTCVLQEALEVHDGV------------------------SKGKY--TVGLGQDCMAFCS-------- 52 (453)
Q Consensus 7 ~~vgI~~i~~y~P~~~v~~~~l~~~~g~------------------------~~~k~--~~Gig~r~~av~~-------- 52 (453)
++|+|.++++|+|++.|+|+++++.++. +.+++ ++||..|+++...
T Consensus 1 ~~~~I~~~g~~lP~~~v~n~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~ 80 (372)
T PRK07515 1 HNVVISGTGLYTPPESISNEELVASFNAYVERFNAENAAAIAAGEVEALQPSSSEFIEKASGIKSRYVMDKEGILDPDRM 80 (372)
T ss_pred CCcEEEEEEeecCCccccHHHHHHHHhhhhhhhcccchhhhccccccccCCCCHHHhhhccCCceEEEecccccCccccc
Confidence 3689999999999999999999876421 23344 4799988876421
Q ss_pred -------C-C--CCHHHHHHHHHHHHHHHcCCCcCCcCEEEEEcccCCCCCccHHHHHHHHhcccCCCCeeEEeeCCcCh
Q 012909 53 -------E-V--EDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACY 122 (453)
Q Consensus 53 -------~-~--ed~~~la~~Aa~~aL~~agi~~~~Id~li~~t~s~~~~~~~~a~~l~~~Lgl~G~~~~~~~dv~~aC~ 122 (453)
+ . ....+|++.|++++|+++|+++++||.|+++|+++.+..|+.+..|++.||+ . ++++++..+|+
T Consensus 81 ~~~~~~r~~~~~~~~~~la~~Aa~~aL~~agl~~~~Id~li~~~~~~~~~~p~~a~~v~~~Lgl---~-~~~~~v~~aCa 156 (372)
T PRK07515 81 RPRIPERSNDELSIQAEMGVAAARQALARAGRTAEDIDAVIVACSNMQRAYPAMAIEIQQALGI---E-GFAFDMNVACS 156 (372)
T ss_pred CcccccccccchhhHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCcHHHHHHHHhcCC---C-CcEEEecchhH
Confidence 0 1 1346899999999999999999999999999988887889999999999998 2 57899999999
Q ss_pred hHHHHHHHHHHHHHhCCCCCCeEEEEEeecc------------------ceeeeecCCCCce--eccCceeeecc-cccc
Q 012909 123 GGTAALFNCVNWVESASWDGRYGLVVCTDTA------------------AVAMLIGPDAPIA--FESKLRGSHMS-HAYD 181 (453)
Q Consensus 123 gg~~AL~~A~~~v~sg~~~~~~aLVv~~d~~------------------AvA~Ll~~~~~l~--~~~~~~~~~~~-~~~d 181 (453)
|++.||..|.++|++|.. ++||||++|.+ |+|+||++.+.-. -...+.++... +..+
T Consensus 157 sg~~al~~A~~~i~~g~~--~~vLvv~~e~~s~~~~~~d~~~~~lfGDgAaA~vL~~~~~~~~~~~~~il~~~~~~~~~~ 234 (372)
T PRK07515 157 SATFGIQTAANAIRSGSA--RRVLVVNPEICSGHLNFRDRDSHFIFGDVATAVIVERADTATSAGGFEILGTRLFTQFSN 234 (372)
T ss_pred HHHHHHHHHHHHHHcCCC--CEEEEEeeecccccccccCCCCCEEecCccEEEEEeeccccccCCCceEEEEEeeccccc
Confidence 999999999999999955 99999999985 8888887753200 00001111110 0001
Q ss_pred -------cc---ccCC---CCCCceecCcchHHHHHHHHHHHHHHHHHHHhhhhcCCCCccCccEEEecCcchHHHHHHH
Q 012909 182 -------FY---KPNL---ASEYPVVDGKLSQTCYLMALDSCYKYFCQKFEKLEGRQFSMLDVDYFVFHSPYNKLVQKSF 248 (453)
Q Consensus 182 -------f~---~p~~---~~~~~~vdG~~s~~~y~~al~~~~~~~~~~~~~~~~~~~~~~d~d~~v~H~p~~km~~ka~ 248 (453)
+. .+.. ...+..++|....+.+...+..+.+..++ ++|++++|||+|++||++.+|.+...
T Consensus 235 ~~~~~~G~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~L~------~~gl~~~dId~~~~Hq~~~~~~d~~~ 308 (372)
T PRK07515 235 NIRNNFGFLNRADPEGIGARDKLFVQEGRKVFKEVCPMVAEHIVEHLA------ENGLTPADVKRFWLHQANINMNQLIG 308 (372)
T ss_pred ceecCCCCCCCCCccccccccceEEeccHHHHHHHHHHHHHHHHHHHH------HcCCCHHHCCEEEECCCCHHHHHHHH
Confidence 11 1100 00112346665544444444444444443 45699999999999999999988754
Q ss_pred HhhhhhhhhccCCchhhHHhhhccCCCCCCccccccchhHHHHHHHHHHHHhhhhcCCCcccccccCccccchHHHHHHH
Q 012909 249 ARLFFNDFLRNASSVDEIAKEKLAPYSTLSDVESYQSRDLEKASQQVAKQLYDLKVQPSTLIPKQVGNMYTASLYAAFAS 328 (453)
Q Consensus 249 ~~l~~~~~~~~~~~~~~~~~~~l~~~l~l~~e~~~~~~~~~k~~~~~~~~~~~~~~~~s~~~~~~~GN~~taSl~l~L~s 328 (453)
+++ +|++.+. +|. ..+.+++|||+|||+|++|..
T Consensus 309 ~~l-----------------------lg~~~~~-------~~~----------------~~~~~~~GNt~sasi~~~L~~ 342 (372)
T PRK07515 309 KKV-----------------------LGRDATP-------EEA----------------PVILDEYANTSSAGSIIAFHK 342 (372)
T ss_pred HHh-----------------------ccCCCCh-------hhc----------------eEeHHhcCCchhhHHHHHHHH
Confidence 332 2332210 011 123489999999999999999
Q ss_pred HHhhcCcCCCCCEEEEEEecchhhheeeEEE
Q 012909 329 LLHEKHSSLEGKRVIMFSYGSGLTATMFSLQ 359 (453)
Q Consensus 329 ll~~~~~~~~Gd~ill~syGsG~~~~~~~l~ 359 (453)
++. ++++||+|+|++||+|++|++.+++
T Consensus 343 ~~~---~~~~Gd~vll~~~G~G~~~~~~ll~ 370 (372)
T PRK07515 343 HSD---DLAAGDLGVICSFGAGYSIGSVIVR 370 (372)
T ss_pred Hhc---cCCCCCEEEEEEecccHHHHHHHhc
Confidence 853 4689999999999999999988765
No 31
>PLN03173 chalcone synthase; Provisional
Probab=100.00 E-value=2.2e-33 Score=287.82 Aligned_cols=295 Identities=17% Similarity=0.227 Sum_probs=208.8
Q ss_pred eeEEeEEEEEcCCceechhHHhhhhC------CCcC---ee-----eEcccceEEeccCC--C-----------------
Q 012909 8 NVGILALDIYFPPTCVLQEALEVHDG------VSKG---KY-----TVGLGQDCMAFCSE--V----------------- 54 (453)
Q Consensus 8 ~vgI~~i~~y~P~~~v~~~~l~~~~g------~~~~---k~-----~~Gig~r~~av~~~--~----------------- 54 (453)
.+.|.++++..|++.++|+++.++.. ..+. ++ +.||..|++.+++. .
T Consensus 16 ~~~i~~i~ta~P~~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~i~~~sgI~~R~~~~~~~~~~~~~~~~~~~~p~~~~r~ 95 (391)
T PLN03173 16 PATIMAIGTSTPPNCVDQSTYPDYYFRITNSEHKVELKEKFKRMCEKSMIKKRYMHLTEEILKENPSVCEYMAPSLDARQ 95 (391)
T ss_pred CeEEEEEEccCCCcccCHHHHHHHHHHHhccccchhHHHHHHHHHHhCCCCeeeEeccchhhhhCcccccccCCCHHHHH
Confidence 36799999999999999999887752 1121 12 47999998876311 0
Q ss_pred ----CCHHHHHHHHHHHHHHHcCCCcCCcCEEEEEcccCCCCCccHHHHHHHHhcccCCCCe-eEEeeCCcChhHHHHHH
Q 012909 55 ----EDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDI-EGVDSTNACYGGTAALF 129 (453)
Q Consensus 55 ----ed~~~la~~Aa~~aL~~agi~~~~Id~li~~t~s~~~~~~~~a~~l~~~Lgl~G~~~~-~~~dv~~aC~gg~~AL~ 129 (453)
+.+.+||++|+++||+++|++|+|||+||++|+|+.+ .|+++.+|+++||+ ++.+ +++++..||+|++.||.
T Consensus 96 ~~~~~~a~~La~~Aa~~AL~~ag~~~~dId~li~~t~t~~~-~P~~a~~l~~~LGl--~~~~~~~~~~~~gC~g~~~aL~ 172 (391)
T PLN03173 96 DMVVVEVPKLGKEAAAKAIKEWGQPKSKITHLVFCTTSGVD-MPGADYQLTKLLGL--RSSVKRFMMYQQGCFAGGTVLR 172 (391)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCCc-ccHHHHHHHHHhCC--CccceeeehhcCccHHHHHHHH
Confidence 1246999999999999999999999999999999976 79999999999999 5556 46788999999999999
Q ss_pred HHHHHHHhCCCCCCeEEEEEeecc------------------------ceeeeecCCCCceecc---Cceeee------c
Q 012909 130 NCVNWVESASWDGRYGLVVCTDTA------------------------AVAMLIGPDAPIAFES---KLRGSH------M 176 (453)
Q Consensus 130 ~A~~~v~sg~~~~~~aLVv~~d~~------------------------AvA~Ll~~~~~l~~~~---~~~~~~------~ 176 (453)
+|.++++++ ++++||||++|.+ |+|+||+.++...++. .+.++. +
T Consensus 173 ~A~~~~~~~--~~~~vLVV~~E~~S~~~~~~~d~~~~~~v~~~LFGDGAaAvvl~~~~~~~~~~~~~~l~~~~~~~~~~t 250 (391)
T PLN03173 173 LAKDLAENN--KGARVLVVCSEITAVTFRGPSDTHLDSLVGQALFGDGAAAIIIGSDPVLGVEKPLFELVSAAQTILPDS 250 (391)
T ss_pred HHHHHHHhC--CCCeEEEEEEehhhhhhCCccccchhhhhhhhhhcCceEEEEEeCCCCCCcCCcceEEEeeeeEEecCC
Confidence 999999998 5699999999875 7888887653211100 011111 1
Q ss_pred ccccc-ccccCCCCCCceecCcchHHHHHHHHHHHHHHHHHHHhhhhcCCCCccCccEEEecCcchHHHHHHHHhhhhhh
Q 012909 177 SHAYD-FYKPNLASEYPVVDGKLSQTCYLMALDSCYKYFCQKFEKLEGRQFSMLDVDYFVFHSPYNKLVQKSFARLFFND 255 (453)
Q Consensus 177 ~~~~d-f~~p~~~~~~~~vdG~~s~~~y~~al~~~~~~~~~~~~~~~~~~~~~~d~d~~v~H~p~~km~~ka~~~l~~~~ 255 (453)
.+.+. ..++. +.. ..+. +.........+..+.+.++ .+.|++.+|+|+|++||++.++++.
T Consensus 251 ~~~~~~~i~~~-G~~-~~l~-~~vp~~~~~~~~~~i~~~L------~~~gl~~~di~~~v~Hqgg~~Il~~--------- 312 (391)
T PLN03173 251 DGAIDGHLREV-GLT-FHLL-KDVPGLISKNVEKSLTEAF------KPLGISDWNSLFWIAHPGGPAILDQ--------- 312 (391)
T ss_pred ccceeeEEEcC-ceE-EEEe-cHHHHHHHHHHHHHHHHHH------HhcCCCccccCeEEECCCcHHHHHH---------
Confidence 11110 00111 100 0011 1111111223333333333 3446888999999999999999877
Q ss_pred hhccCCchhhHHhhhccCCCCCCccccccchhHHHHHHHHHHHHhhhhcCCCcccccccCccccchHHHHHHHHHhh---
Q 012909 256 FLRNASSVDEIAKEKLAPYSTLSDVESYQSRDLEKASQQVAKQLYDLKVQPSTLIPKQVGNMYTASLYAAFASLLHE--- 332 (453)
Q Consensus 256 ~~~~~~~~~~~~~~~l~~~l~l~~e~~~~~~~~~k~~~~~~~~~~~~~~~~s~~~~~~~GN~~taSl~l~L~sll~~--- 332 (453)
+++.||+++++ +.+|+...+++|||+|+|+++.|..++++
T Consensus 313 ---------------v~~~LgL~~ek----------------------l~~s~~vl~~yGNtSSaSv~~vL~~~~~~~~~ 355 (391)
T PLN03173 313 ---------------VEAKLALKPEK----------------------LRATRHVLSEYGNMSSACVLFILDEMRKKSAE 355 (391)
T ss_pred ---------------HHHHcCCChHH----------------------HHHHHHHHHHhCcchhhHHHHHHHHHHHhhhh
Confidence 45567888762 22333445899999999999999999963
Q ss_pred cCcCC--CC-CEEEEEEecchhhheeeEEEEec
Q 012909 333 KHSSL--EG-KRVIMFSYGSGLTATMFSLQLQE 362 (453)
Q Consensus 333 ~~~~~--~G-d~ill~syGsG~~~~~~~l~~~~ 362 (453)
.+... +| ++++|++||+|+++++.+++|..
T Consensus 356 ~~~~~~g~~~~~~l~~afGpG~t~e~~ll~~~~ 388 (391)
T PLN03173 356 DGLKSTGEGLEWGVLFGFGPGLTVETVVLHSVA 388 (391)
T ss_pred cCCCCCCCCcceEEEEEeCchHHHHHHHHhhcc
Confidence 12222 33 88999999999999999998754
No 32
>PLN02377 3-ketoacyl-CoA synthase
Probab=100.00 E-value=1.3e-32 Score=287.16 Aligned_cols=303 Identities=19% Similarity=0.293 Sum_probs=213.5
Q ss_pred CCCceeEEeEEEEEcCCc--eechhHHhhhh---C-CCcC------ee--eEcccceEEeccC------C-------CCC
Q 012909 4 WHPKNVGILALDIYFPPT--CVLQEALEVHD---G-VSKG------KY--TVGLGQDCMAFCS------E-------VED 56 (453)
Q Consensus 4 ~~~~~vgI~~i~~y~P~~--~v~~~~l~~~~---g-~~~~------k~--~~Gig~r~~av~~------~-------~ed 56 (453)
.|+..|.+...+.|.|+. +++.+.+.+.. | .+++ |+ +.|+|++ ..+|+ + .+.
T Consensus 93 ~~~~~vylvd~~c~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~ri~~~sgig~~-t~~p~~~~~~~~~~~~~~~~~e 171 (502)
T PLN02377 93 TRPRPVYLVDYSCYRAPDHLKAPFARFMEHSRLTGDFDDSSLEFQRKILERSGLGED-TYVPEAMHYIPPRPSMAAAREE 171 (502)
T ss_pred cCCCCEEEEeeeeecCCccccccHHHHHHHHHHhCCCCHHHHHHHHHHHHhcCCCCc-cccCchhccCCccchHHHHHHH
Confidence 467889999999999964 77888766553 2 2222 12 5799984 33441 1 245
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCEEEEEcccCCCCCccHHHHHHHHhcccCCCCeeEEeeC-CcChhHHHHHHHHHHHH
Q 012909 57 VISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDST-NACYGGTAALFNCVNWV 135 (453)
Q Consensus 57 ~~~la~~Aa~~aL~~agi~~~~Id~li~~t~s~~~~~~~~a~~l~~~Lgl~G~~~~~~~dv~-~aC~gg~~AL~~A~~~v 135 (453)
+.+++..|+++||+++|++|+|||.||+ |+|++...|+++..|+++||+ ++++.++|++ .||+||+.||++|.+++
T Consensus 172 a~~l~~~A~~~aL~kaGi~p~dID~LVv-~cS~~~~~PSlaa~V~~~LGl--r~~v~afdL~gmGCsggl~aL~lA~~ll 248 (502)
T PLN02377 172 AEQVMFGALDNLFANTNVNPKDIGILVV-NCSLFNPTPSLSAMIVNKYKL--RGNIRSFNLGGMGCSAGVIAVDLAKDML 248 (502)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEE-ECCCCCCCCcHHHHHHHHhCC--CCCCeEEecccchhhHHHHHHHHHHHHH
Confidence 7899999999999999999999999988 899988899999999999999 6699999998 79999999999999999
Q ss_pred HhCCCCCCeEEEEEeecc----------------------ceeeeecCCCCce----ecc-Cceeeeccc---cccc-cc
Q 012909 136 ESASWDGRYGLVVCTDTA----------------------AVAMLIGPDAPIA----FES-KLRGSHMSH---AYDF-YK 184 (453)
Q Consensus 136 ~sg~~~~~~aLVv~~d~~----------------------AvA~Ll~~~~~l~----~~~-~~~~~~~~~---~~df-~~ 184 (453)
+++ ++++||||++|.. |+|+||++.+.-. ... ++..++... .++. +.
T Consensus 249 ~~~--~~~~aLVVstE~~S~~~~~~d~~s~lv~n~LFgDGAaAvlLs~~~~~~~~a~~~l~~iv~t~~~~d~~~~~~i~~ 326 (502)
T PLN02377 249 QVH--RNTYAVVVSTENITQNWYFGNKKSMLIPNCLFRVGGSAVLLSNKSRDKRRSKYKLVHVVRTHRGADDKAFRCVYQ 326 (502)
T ss_pred HcC--CCCEEEEEEEeccccccCCCCCccccccceeeccccEEEEEecccccccccccccceEEEEEEEEcCCccceeee
Confidence 999 5599999999985 8899998742100 000 122222221 1221 11
Q ss_pred c---CCC------CCCceecCc-----------chH----HHHHHHHHHHHHHHHHHHhhhhcCC-CCccCccEEEecCc
Q 012909 185 P---NLA------SEYPVVDGK-----------LSQ----TCYLMALDSCYKYFCQKFEKLEGRQ-FSMLDVDYFVFHSP 239 (453)
Q Consensus 185 p---~~~------~~~~~vdG~-----------~s~----~~y~~al~~~~~~~~~~~~~~~~~~-~~~~d~d~~v~H~p 239 (453)
| .++ .+.+.+.|+ ... +.+..+.....+.+.+.+ +..+ ...+|||+||+||+
T Consensus 327 ~~d~~G~~g~~ls~dl~~v~g~~l~~~i~~lg~~vl~~se~~~~~a~~~~~~~~~~~l---~~~~p~~~~didhf~iHqg 403 (502)
T PLN02377 327 EQDDAGKTGVSLSKDLMAIAGEALKTNITTLGPLVLPISEQLLFFATLVVKKLFNKKM---KPYIPDFKLAFDHFCIHAG 403 (502)
T ss_pred ccccCCCCCCCCCcchhhHhhHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHH---hhccCCcHhhcCEEEECCC
Confidence 2 111 112223332 110 001111111111111122 1111 34689999999999
Q ss_pred chHHHHHHHHhhhhhhhhccCCchhhHHhhhccCCCCCCccccccchhHHHHHHHHHHHHhhhhcCCCcccccccCcccc
Q 012909 240 YNKLVQKSFARLFFNDFLRNASSVDEIAKEKLAPYSTLSDVESYQSRDLEKASQQVAKQLYDLKVQPSTLIPKQVGNMYT 319 (453)
Q Consensus 240 ~~km~~ka~~~l~~~~~~~~~~~~~~~~~~~l~~~l~l~~e~~~~~~~~~k~~~~~~~~~~~~~~~~s~~~~~~~GN~~t 319 (453)
+.++++. +++.++++++ ++++ +....+++|||+|
T Consensus 404 gr~IId~------------------------v~k~LgL~~~------~~e~----------------sr~tL~r~GNTSS 437 (502)
T PLN02377 404 GRAVIDE------------------------LEKNLQLLPV------HVEA----------------SRMTLHRFGNTSS 437 (502)
T ss_pred CHHHHHH------------------------HHHHcCCCcc------cchH----------------HHHHHHhcCCchh
Confidence 9999876 4456677764 1223 3334489999999
Q ss_pred chHHHHHHHHHhhcCcCCCCCEEEEEEecchhhheeeEEEEec
Q 012909 320 ASLYAAFASLLHEKHSSLEGKRVIMFSYGSGLTATMFSLQLQE 362 (453)
Q Consensus 320 aSl~l~L~sll~~~~~~~~Gd~ill~syGsG~~~~~~~l~~~~ 362 (453)
+|+|+.|..++++ +++++||+|++++||+|+++++.++++-.
T Consensus 438 aSI~~aL~~~~~~-grik~Gd~VlliaFGsGf~~~s~v~~~~~ 479 (502)
T PLN02377 438 SSIWYELAYIEAK-GRMRKGNRVWQIAFGSGFKCNSAVWEALR 479 (502)
T ss_pred hHHHHHHHHHHHc-CCCCCCCeEEEEEEccccEeeeEEEEEec
Confidence 9999999999987 88999999999999999999999999865
No 33
>PLN02854 3-ketoacyl-CoA synthase
Probab=100.00 E-value=1.4e-31 Score=279.38 Aligned_cols=302 Identities=19% Similarity=0.282 Sum_probs=210.9
Q ss_pred CCCceeEEeEEEEEcCCc--eechhHHhhhh---C-CCcC------ee--eEcccceEEeccC------C-------CCC
Q 012909 4 WHPKNVGILALDIYFPPT--CVLQEALEVHD---G-VSKG------KY--TVGLGQDCMAFCS------E-------VED 56 (453)
Q Consensus 4 ~~~~~vgI~~i~~y~P~~--~v~~~~l~~~~---g-~~~~------k~--~~Gig~r~~av~~------~-------~ed 56 (453)
.|+..|.+...++|-|+. +++.+.+.+.. | .+++ |+ +.|+|++.. +|+ + .+.
T Consensus 109 ~~~~~vylvd~~c~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~sg~g~~ty-~P~~~~~~~~~~~~~~~r~e 187 (521)
T PLN02854 109 KRSKPVYLVDFACYKPEDERKISVDSFLTMTEENGSFEDETVQFQRRISTRSGLGDETY-LPRGITSRPPNLCMEEARAE 187 (521)
T ss_pred cCCCcEEEEeeeeecCCccccccHHHHHHHHHHcCCCCHHHHHHHHHHHHhcCCCCccc-cCccccCCCCcchHHHHHHH
Confidence 467889999999999864 77777666553 3 2332 11 579998764 222 1 123
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCEEEEEcccCCCCCccHHHHHHHHhcccCCCCeeEEeeC-CcChhHHHHHHHHHHHH
Q 012909 57 VISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDST-NACYGGTAALFNCVNWV 135 (453)
Q Consensus 57 ~~~la~~Aa~~aL~~agi~~~~Id~li~~t~s~~~~~~~~a~~l~~~Lgl~G~~~~~~~dv~-~aC~gg~~AL~~A~~~v 135 (453)
+......|++++|+++|++|+|||.||++ +|+++..|++++.|+++||+ ..++.++|++ .||+||+.||.+|.+++
T Consensus 188 a~~v~~~~~~~lL~kaGi~p~dID~LIv~-cS~~~p~PSlAa~I~n~LGl--r~~i~afdLsgmGCSggl~aL~lA~~lL 264 (521)
T PLN02854 188 AEAVMFGALDSLFSKTGVKPRDIGILIVN-CSLFNPTPSLSAMIVNHYKL--RTDIKSYNLGGMGCSAGLISIDLANDLL 264 (521)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEE-CCCCCCCCCHHHHHHHHhCC--CCCceEEecccchhhhHHHHHHHHHHHH
Confidence 45666788999999999999999999984 77887899999999999999 6699999998 89999999999999999
Q ss_pred HhCCCCCCeEEEEEeecc----------------------ceeeeecCCCCc----eecc-Cceeeeccc---ccc-ccc
Q 012909 136 ESASWDGRYGLVVCTDTA----------------------AVAMLIGPDAPI----AFES-KLRGSHMSH---AYD-FYK 184 (453)
Q Consensus 136 ~sg~~~~~~aLVv~~d~~----------------------AvA~Ll~~~~~l----~~~~-~~~~~~~~~---~~d-f~~ 184 (453)
+++ ++++||||++|.+ |+|+||++.+.- .++. +...++... .++ .+.
T Consensus 265 ~~~--~~~~aLVVstE~~S~~~y~g~Drs~lv~~~LFgDGAAAvlLs~~~~~~~~~k~~L~~~v~t~~~ad~~~~~~i~~ 342 (521)
T PLN02854 265 KAN--PNSYAVVVSTENITLNWYFGNDRSMLLCNCIFRMGGAAVLLSNKARDRKRSKYQLVHTVRTHKGADDKNYNCVYQ 342 (521)
T ss_pred HhC--CCCeEEEEEEeeeecCCCCCCchhhhcceeeeccceeEEEEecccccccccchheeeEEEEEEeeCCCccCeEEe
Confidence 999 5599999999984 888899874310 0000 012222211 111 111
Q ss_pred cC--CC-------CCCc-----------eecCcchHHHHHHHHHHHHHHHHHHHhhhhcCCCCc------cCccEEEecC
Q 012909 185 PN--LA-------SEYP-----------VVDGKLSQTCYLMALDSCYKYFCQKFEKLEGRQFSM------LDVDYFVFHS 238 (453)
Q Consensus 185 p~--~~-------~~~~-----------~vdG~~s~~~y~~al~~~~~~~~~~~~~~~~~~~~~------~d~d~~v~H~ 238 (453)
|. .+ .+.+ .+.|+.... +.+.+.-......+++ .+.+++. .||||||+||
T Consensus 343 ~~d~~G~~g~~lsk~l~~va~~~l~~~i~~~g~~Vl~-~se~~~f~~~~i~~~L---~~~gl~~~~pd~~~didhf~iHq 418 (521)
T PLN02854 343 REDDKGTIGVSLARELMAVAGDALKTNITTLGPLVLP-LSEQFMFFVTLVRRKL---LKAKVKPYIPDFKLAFEHFCIHA 418 (521)
T ss_pred ccCCCCcccccccccccchhhhhhhhhhhhccccccc-hHHHHHHHHHHHHHHH---HHcCCCccCCcccccCcEEEECC
Confidence 21 01 0111 122332211 0111110111222222 2334554 6899999999
Q ss_pred cchHHHHHHHHhhhhhhhhccCCchhhHHhhhccCCCCCCccccccchhHHHHHHHHHHHHhhhhcCCCcccccccCccc
Q 012909 239 PYNKLVQKSFARLFFNDFLRNASSVDEIAKEKLAPYSTLSDVESYQSRDLEKASQQVAKQLYDLKVQPSTLIPKQVGNMY 318 (453)
Q Consensus 239 p~~km~~ka~~~l~~~~~~~~~~~~~~~~~~~l~~~l~l~~e~~~~~~~~~k~~~~~~~~~~~~~~~~s~~~~~~~GN~~ 318 (453)
++.++++. +++.++++++ +++++....+++|||+
T Consensus 419 ggr~IId~------------------------v~k~LgL~~~----------------------~~e~sr~tL~rfGNTS 452 (521)
T PLN02854 419 GGRAVLDE------------------------LQKNLQLSDW----------------------HMEPSRMTLHRFGNTS 452 (521)
T ss_pred CCHHHHHH------------------------HHHHcCCCcc----------------------cccchHHHhhhcCChH
Confidence 99999876 4556677753 2234444458999999
Q ss_pred cchHHHHHHHHHhhcCcCCCCCEEEEEEecchhhheeeEEEEec
Q 012909 319 TASLYAAFASLLHEKHSSLEGKRVIMFSYGSGLTATMFSLQLQE 362 (453)
Q Consensus 319 taSl~l~L~sll~~~~~~~~Gd~ill~syGsG~~~~~~~l~~~~ 362 (453)
|+|+|+.|..+.++ |++++||+|++++||+|++|++.+++|-.
T Consensus 453 SASI~~~L~~~~~k-Grik~GD~Vl~iaFGsGft~~sav~~~~~ 495 (521)
T PLN02854 453 SSSLWYELAYTEAK-GRVSAGDRVWQIAFGSGFKCNSAVWKALR 495 (521)
T ss_pred hhHHHHHHHHHHHc-CCCCCCCEEEEEEEchhhhhhheeeEEec
Confidence 99999999999987 88999999999999999999999999876
No 34
>PLN02932 3-ketoacyl-CoA synthase
Probab=100.00 E-value=6.4e-32 Score=280.35 Aligned_cols=300 Identities=20% Similarity=0.295 Sum_probs=210.5
Q ss_pred CCCceeEEeEEEEEcCCc--eechhHHhhhh------C-CCcC---------ee--eEcccceEEeccCCC---------
Q 012909 4 WHPKNVGILALDIYFPPT--CVLQEALEVHD------G-VSKG---------KY--TVGLGQDCMAFCSEV--------- 54 (453)
Q Consensus 4 ~~~~~vgI~~i~~y~P~~--~v~~~~l~~~~------g-~~~~---------k~--~~Gig~r~~av~~~~--------- 54 (453)
.|+..|.+...+.|-|+. +++.+.+.+.. | .+.+ |+ ++|||+++.. |...
T Consensus 63 ~~~~~vyl~d~~c~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~i~~rsGig~~t~~-p~~~~~~~~~~~~ 141 (478)
T PLN02932 63 TRPKPVYLVDFSCYLPPSHLKASIQTIMGHVRRVREAGAWKQESDYLMDFCEKILERSGLGQETYI-PEGLQCLPLQQNL 141 (478)
T ss_pred cCCCcEEEEeeeeecCcccccccHHHHHHHHHhhcccCCCCccchhHHHHHHHHHHHcCCCCceee-ccccccCCHHHHH
Confidence 568889999999999964 77777766543 2 2222 12 5799998864 3321
Q ss_pred ----CCHHHHHHHHHHHHHHHcCCCcCCcCEEEEEcccCCCCCccHHHHHHHHhcccCCCCeeEEeeC-CcChhHHHHHH
Q 012909 55 ----EDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDST-NACYGGTAALF 129 (453)
Q Consensus 55 ----ed~~~la~~Aa~~aL~~agi~~~~Id~li~~t~s~~~~~~~~a~~l~~~Lgl~G~~~~~~~dv~-~aC~gg~~AL~ 129 (453)
+.+.+|+..|+++||+++|++|+|||.||++|+++. ..|+++..|+++||+ ++++.+||++ .||+||+.||.
T Consensus 142 ~~~~~ea~~la~~Aa~~aL~~agi~p~dId~lIv~tst~~-~~Pslaa~V~~~lGl--r~~i~~fdL~gmGCSggl~aL~ 218 (478)
T PLN02932 142 AVSRKETEEVIIGAVDNLFRNTGISPSDIGILVVNSSTFN-PTPSLSSILVNKFKL--RDNIKSLNLGGMGCSAGVIAID 218 (478)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCC-CCCcHHHHHHHHhCC--CCCceEEEeccchhhhHHHHHH
Confidence 247899999999999999999999999999999986 799999999999999 6789999998 89999999999
Q ss_pred HHHHHHHhCCCCCCeEEEEEeecc----------------------ceeeeecCCCC------ceeccCceeeecccccc
Q 012909 130 NCVNWVESASWDGRYGLVVCTDTA----------------------AVAMLIGPDAP------IAFESKLRGSHMSHAYD 181 (453)
Q Consensus 130 ~A~~~v~sg~~~~~~aLVv~~d~~----------------------AvA~Ll~~~~~------l~~~~~~~~~~~~~~~d 181 (453)
+|.++++++ ++++||||++|.+ |+|+||+..+. ..+.. ...++.....+
T Consensus 219 lA~~ll~~~--~~~~aLVVstE~~S~~~~~~d~r~~l~t~~LFgDGAAAvlLs~~~~~~~~~~~~L~~-~v~t~~~ad~~ 295 (478)
T PLN02932 219 AAKSLLQVH--RNTYALVVSTENITQNLYLGNNKSMLVTNCLFRIGGAAILLSNRSRDRKRAKYELVH-TVRVHTGADDR 295 (478)
T ss_pred HHHHHHHcC--CCCeEEEEEEeecccccCCCcchhhhccceeecccceEEEEecccccccCcceEEEe-eeeeeeccCCC
Confidence 999999999 5599999999986 88999987541 01110 11222211111
Q ss_pred c----cccC--CC-------CCCcee-----------cCcchH---HHHHHHHHHHHHHHHHHHhhhhcCCCCc---cCc
Q 012909 182 F----YKPN--LA-------SEYPVV-----------DGKLSQ---TCYLMALDSCYKYFCQKFEKLEGRQFSM---LDV 231 (453)
Q Consensus 182 f----~~p~--~~-------~~~~~v-----------dG~~s~---~~y~~al~~~~~~~~~~~~~~~~~~~~~---~d~ 231 (453)
. +.+. .| .+.|.+ .|+... ..+..++....+.+.+.. ..+... .+|
T Consensus 296 ~~~~v~~~~d~~G~~g~~Lsk~lp~~~~~al~~ni~~~~p~v~p~~e~~~~~~~~~~~~~~k~~----~~~~~~~~~~~i 371 (478)
T PLN02932 296 SYECATQEEDEDGIVGVSLSKNLPMVAARTLKINIATLGPLVLPLSEKFHFFVRFVKKKFFNPK----LKHYIPDFKLAF 371 (478)
T ss_pred ccccceeecccCCcceeeECccchHHHHHHHhhhhhccccccccchhhhHHHHHHhHHHHHHHH----hhcCcHhHHhhh
Confidence 1 1111 00 011111 111110 111112222222221110 011222 689
Q ss_pred cEEEecCcchHHHHHHHHhhhhhhhhccCCchhhHHhhhccCCCCCCccccccchhHHHHHHHHHHHHhhhhcCCCcccc
Q 012909 232 DYFVFHSPYNKLVQKSFARLFFNDFLRNASSVDEIAKEKLAPYSTLSDVESYQSRDLEKASQQVAKQLYDLKVQPSTLIP 311 (453)
Q Consensus 232 d~~v~H~p~~km~~ka~~~l~~~~~~~~~~~~~~~~~~~l~~~l~l~~e~~~~~~~~~k~~~~~~~~~~~~~~~~s~~~~ 311 (453)
||||+||++.++++. +++.+|++++ ++++ |....
T Consensus 372 d~f~iHqggr~IIda------------------------v~k~LgL~~~------~~e~----------------s~~tL 405 (478)
T PLN02932 372 EHFCIHAGGRALIDE------------------------MEKNLHLTPL------DVEA----------------SRMTL 405 (478)
T ss_pred ceEEEccCCHHHHHH------------------------HHHHcCCChH------HHHH----------------HHHHH
Confidence 999999999999876 4556688774 2333 33344
Q ss_pred cccCccccchHHHHHHHHHhhcCcCCCCCEEEEEEecchhhheeeEEEEe
Q 012909 312 KQVGNMYTASLYAAFASLLHEKHSSLEGKRVIMFSYGSGLTATMFSLQLQ 361 (453)
Q Consensus 312 ~~~GN~~taSl~l~L~sll~~~~~~~~Gd~ill~syGsG~~~~~~~l~~~ 361 (453)
+++|||+|+|+|+.|+.+.++ +++++||+|++++||+|+++++.+++.-
T Consensus 406 ~rfGNTSSaSI~~~L~~~ea~-grik~Gd~vl~iaFGsGf~~~s~vw~~~ 454 (478)
T PLN02932 406 HRFGNTSSSSIWYELAYTEAK-GRMKKGDRIWQIALGSGFKCNSSVWVAL 454 (478)
T ss_pred HHhCChhhhHHHHHHHHHHHc-CCCCCCCEEEEEEEeccHHHHHHHHHHh
Confidence 899999999999999999887 7889999999999999999998886643
No 35
>PLN02192 3-ketoacyl-CoA synthase
Probab=99.97 E-value=1e-30 Score=272.30 Aligned_cols=296 Identities=17% Similarity=0.264 Sum_probs=205.9
Q ss_pred CCCceeEEeEEEEEcCCc--eechhHHhhhh---C-CCcC------ee--eEcccceEEeccC------C-------CCC
Q 012909 4 WHPKNVGILALDIYFPPT--CVLQEALEVHD---G-VSKG------KY--TVGLGQDCMAFCS------E-------VED 56 (453)
Q Consensus 4 ~~~~~vgI~~i~~y~P~~--~v~~~~l~~~~---g-~~~~------k~--~~Gig~r~~av~~------~-------~ed 56 (453)
.|+..|.+...+.|-|+. +++.+.+.+.. | .+++ |+ +.|+|++.. +|+ + .+.
T Consensus 97 ~~~~~vylvd~~c~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~sglg~~t~-~p~~~~~~~~~~~~~~~~~E 175 (511)
T PLN02192 97 TRPRPVYLVDFSCYKPDDSRKCTRKIFMDRSKLTGSFTEENLEFQRKILERSGLGESTY-LPEAVLNVPPNPCMAEARKE 175 (511)
T ss_pred cCCCcEEEEeeeeecCCccccccHHHHHHHHHHcCCCCHHHHHHHHHHHHhcCCCCccc-CChhhccCCCCccHHHHHHH
Confidence 467889999999999965 67777766653 2 2322 11 579998764 221 1 234
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCEEEEEcccCCCCCccHHHHHHHHhcccCCCCeeEEeeC-CcChhHHHHHHHHHHHH
Q 012909 57 VISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDST-NACYGGTAALFNCVNWV 135 (453)
Q Consensus 57 ~~~la~~Aa~~aL~~agi~~~~Id~li~~t~s~~~~~~~~a~~l~~~Lgl~G~~~~~~~dv~-~aC~gg~~AL~~A~~~v 135 (453)
+..+...|+++||+++|++|+|||.||++ ++++...|++++.|+++||+ ..++.+||++ .||+||+.||++|.+++
T Consensus 176 a~~~~~~Aa~~aL~kaGi~p~DIDiLIv~-~S~~~~~PSlaa~I~n~lGl--r~~i~afdLsgmGCSggl~aLdlA~~lL 252 (511)
T PLN02192 176 AETVMFGAIDQLLAKTSVKPKDIGILIVN-CSLFNPTPSLSAMVINHYKL--RGNILSYNLGGMGCSAGLISIDLAKHLL 252 (511)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEE-CCCCCCCchHHHHHHHHhCC--CCCceEEEcccchhhhHHHHHHHHHHHH
Confidence 67889999999999999999999999987 56777899999999999998 5689999998 79999999999999999
Q ss_pred HhCCCCCCeEEEEEeecc----------------------ceeeeecCCCC------ceeccCceeeecccccccc----
Q 012909 136 ESASWDGRYGLVVCTDTA----------------------AVAMLIGPDAP------IAFESKLRGSHMSHAYDFY---- 183 (453)
Q Consensus 136 ~sg~~~~~~aLVv~~d~~----------------------AvA~Ll~~~~~------l~~~~~~~~~~~~~~~df~---- 183 (453)
+++ ++++||||++|.+ |+|+||++.+. ..+.. ...++.....+.|
T Consensus 253 ~a~--~~~~aLVVstE~~S~n~y~g~drs~lv~n~LFgDGAaAvLLs~~~~~~~~~k~~L~~-~vrt~~~~dd~~~~~v~ 329 (511)
T PLN02192 253 QVH--PNSYALVISMENITLNWYFGNDRSMLVSNCLFRMGGAAILLSNKRSDRRRSKYQLVH-TVRTHKGADDKCFACVT 329 (511)
T ss_pred HcC--CCCeEEEEEEEeccccCCCCCCHHHHhccccccccceEEEEeccccccccccceeee-eEEEEecCChhhcccee
Confidence 999 5599999999985 88999987431 01110 0112221111111
Q ss_pred ccCCC---------CCCceecCcchHHHH----------------------HHHHHHHHHHHHHHHhhhhcCCCCccCcc
Q 012909 184 KPNLA---------SEYPVVDGKLSQTCY----------------------LMALDSCYKYFCQKFEKLEGRQFSMLDVD 232 (453)
Q Consensus 184 ~p~~~---------~~~~~vdG~~s~~~y----------------------~~al~~~~~~~~~~~~~~~~~~~~~~d~d 232 (453)
.|... .+.+.+-|....... .+.++...+.+...+ ..+||
T Consensus 330 ~~ed~~g~~g~~Lskdl~~vag~al~~ni~~l~p~vlp~~e~~~~~~~m~gr~vfk~~~~~~~p~~---------~~~Id 400 (511)
T PLN02192 330 QEEDSAGKIGVSLSKDLMAVAGDALKTNITTLGPLVLPMSEQLLFFATLVGKKLFKMKLKPYIPDF---------KLAFE 400 (511)
T ss_pred cccccccceeeEecchhhhhhhhhhhhhhhhcccccCccchhhceeEEEcChHHHHHHhhhccHHH---------HHhhc
Confidence 11000 000111111000000 000000011111111 24799
Q ss_pred EEEecCcchHHHHHHHHhhhhhhhhccCCchhhHHhhhccCCCCCCccccccchhHHHHHHHHHHHHhhhhcCCCccccc
Q 012909 233 YFVFHSPYNKLVQKSFARLFFNDFLRNASSVDEIAKEKLAPYSTLSDVESYQSRDLEKASQQVAKQLYDLKVQPSTLIPK 312 (453)
Q Consensus 233 ~~v~H~p~~km~~ka~~~l~~~~~~~~~~~~~~~~~~~l~~~l~l~~e~~~~~~~~~k~~~~~~~~~~~~~~~~s~~~~~ 312 (453)
+||+||++.++++. +++.+|++++ ++++... ..+
T Consensus 401 hf~iHqggr~IId~------------------------v~k~LgL~~~------~~e~sr~----------------tL~ 434 (511)
T PLN02192 401 HFCIHAGGRAVLDE------------------------LEKNLQLSDW------HMEPSRM----------------TLY 434 (511)
T ss_pred eEeeccCCHHHHHH------------------------HHHHcCCCch------hhhHHHH----------------HHh
Confidence 99999999999876 4456677763 2233333 348
Q ss_pred ccCccccchHHHHHHHHHhhcCcCCCCCEEEEEEecchhhheeeEEEEec
Q 012909 313 QVGNMYTASLYAAFASLLHEKHSSLEGKRVIMFSYGSGLTATMFSLQLQE 362 (453)
Q Consensus 313 ~~GN~~taSl~l~L~sll~~~~~~~~Gd~ill~syGsG~~~~~~~l~~~~ 362 (453)
++|||+|+|+|+.|+.+.++ +++++||+|++++||+|+++++.+++|-.
T Consensus 435 rfGNTSSaSI~~aL~~~eak-grik~GDrVl~iaFGsGf~~~sav~~~~~ 483 (511)
T PLN02192 435 RFGNTSSSSLWYELAYSEAK-GRIKKGDRTWQIAFGSGFKCNSAVWKALR 483 (511)
T ss_pred HcCChHHhHHHHHHHHHHHc-CCCCCCCEEEEEEEcchHhhhhhheeeec
Confidence 99999999999999999987 78999999999999999999999999865
No 36
>COG3424 BcsA Predicted naringenin-chalcone synthase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.97 E-value=3.1e-30 Score=245.87 Aligned_cols=293 Identities=17% Similarity=0.239 Sum_probs=214.4
Q ss_pred EEeEEEEEcCCceechhHHhhhhCC----C-cCe----e--eEcccceEEeccCC---------------CCCHHHHHHH
Q 012909 10 GILALDIYFPPTCVLQEALEVHDGV----S-KGK----Y--TVGLGQDCMAFCSE---------------VEDVISMSLT 63 (453)
Q Consensus 10 gI~~i~~y~P~~~v~~~~l~~~~g~----~-~~k----~--~~Gig~r~~av~~~---------------~ed~~~la~~ 63 (453)
-|.+++.++|++.++|.|+...+-. + -+. | ..+|..|+...|.+ -|.++.|+++
T Consensus 3 ~i~sv~t~~Ppy~~~Qse~~d~f~~~~~~~~~~~I~r~l~~~~~i~~R~~v~Pl~~y~e~~~f~ekN~ifie~a~~l~v~ 82 (356)
T COG3424 3 VIASVATALPPYRYNQSEITDSFAELPFQEGREDIPRVLHANAQINRRHLVLPLDWYREPHGFGEKNEIFIEEAVPLGVD 82 (356)
T ss_pred eeeecccCCCccccchHHHHHHHHHhccccchHHHHHHHhhccccccceecccHhhccCCCChhhhhhhHHHHHHHHHHH
Confidence 5899999999999999876655321 1 111 1 23455555443321 2467899999
Q ss_pred HHHHHHHHcCCCcCCcCEEEEEcccCCCCCccHHHHHHHHhcccCCCCeeEEee-CCcChhHHHHHHHHHHHHHhCCCCC
Q 012909 64 VVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDS-TNACYGGTAALFNCVNWVESASWDG 142 (453)
Q Consensus 64 Aa~~aL~~agi~~~~Id~li~~t~s~~~~~~~~a~~l~~~Lgl~G~~~~~~~dv-~~aC~gg~~AL~~A~~~v~sg~~~~ 142 (453)
|.++||+..++.|+|||+|+++|+|+.- .|++-.+|+.+||+ ++++..+.+ ..||++|.+||..|.+++++. |.
T Consensus 83 a~r~aL~~~~l~pedId~vv~vtsTG~~-~Ps~dari~~~Lgl--~p~~~Rvpv~glGCaaga~glara~~y~ra~--P~ 157 (356)
T COG3424 83 ALRRALDGSPLRPEDIDAVVTVTSTGLA-TPSLDARIVGELGL--SPDTRRVPVWGLGCAAGAAGLARARDYCRAA--PD 157 (356)
T ss_pred HHHHHhccCCCCHHHCcEEEEEeecccc-CCChhHHHHhhcCC--CCccceeeeecchhhhhhhHHHHHHHHHhhC--cc
Confidence 9999999999999999999999999985 89999999999999 789988888 589999999999999999999 66
Q ss_pred CeEEEEEeecc-----------------------ceeeeecCCCCc----eeccCceeeeccccccc-----cccCCCCC
Q 012909 143 RYGLVVCTDTA-----------------------AVAMLIGPDAPI----AFESKLRGSHMSHAYDF-----YKPNLASE 190 (453)
Q Consensus 143 ~~aLVv~~d~~-----------------------AvA~Ll~~~~~l----~~~~~~~~~~~~~~~df-----~~p~~~~~ 190 (453)
.+|||||.|.| ++|+|++.+.+. ...+.+.++.+.-..|- |.-. ...
T Consensus 158 ~~vlvV~vELCSLt~~~~d~t~s~lVgtaLF~DG~AA~vv~gd~~~~~~~~~~p~i~~s~StL~~dse~~Mgwdv~-d~G 236 (356)
T COG3424 158 ANVLVVCVELCSLTYVFADDTKSNLVGTALFGDGAAAVVVSGDRRAEGKRPLRPDILDSFSTLYPDSEDIMGWDVG-DQG 236 (356)
T ss_pred ceEEEEEeeeeeeeeecCCCCcccceeeeeecCCeeEEEEeccccccccCCCCceecccccccCCccccccceeec-CCc
Confidence 99999999998 777777766431 11222333332211110 0000 011
Q ss_pred CceecCcchHHHHHHHHHHHHHHHHHHHhhhhcCCCCccCccEEEecCcchHHHHHHHHhhhhhhhhccCCchhhHHhhh
Q 012909 191 YPVVDGKLSQTCYLMALDSCYKYFCQKFEKLEGRQFSMLDVDYFVFHSPYNKLVQKSFARLFFNDFLRNASSVDEIAKEK 270 (453)
Q Consensus 191 ~~~vdG~~s~~~y~~al~~~~~~~~~~~~~~~~~~~~~~d~d~~v~H~p~~km~~ka~~~l~~~~~~~~~~~~~~~~~~~ 270 (453)
+-.+-.+.........+......++... +++.+||+.|+.|..++|++++
T Consensus 237 ~~~vlSrdlp~lIe~~l~~~V~~fL~~~------~ls~~dI~~w~~HPGG~KVida------------------------ 286 (356)
T COG3424 237 LKVVLSRDLPNLIESYLAPNVTTFLATH------GLSIEDIEAWVVHPGGPKVIDA------------------------ 286 (356)
T ss_pred EEEEEcCchhHHHHHHhhhhHHHHHHHc------CCchhhhceeeeCCCCchHHHH------------------------
Confidence 1111111111111233444455555443 5999999999999999999877
Q ss_pred ccCCCCCCccccccchhHHHHHHHHHHHHhhhhcCCCcccccccCccccchHHHHHHHHHhhcCcCCCCCEEEEEEecch
Q 012909 271 LAPYSTLSDVESYQSRDLEKASQQVAKQLYDLKVQPSTLIPKQVGNMYTASLYAAFASLLHEKHSSLEGKRVIMFSYGSG 350 (453)
Q Consensus 271 l~~~l~l~~e~~~~~~~~~k~~~~~~~~~~~~~~~~s~~~~~~~GN~~taSl~l~L~sll~~~~~~~~Gd~ill~syGsG 350 (453)
.++.||++++ +++.|+..++++|||.|||++..|-..+++. .++|.+.+|+++|+|
T Consensus 287 ~~~sLgls~e----------------------~l~~s~~~L~~~GNMSSatvLfVL~d~l~~~--~~~g~~Gl~~A~GPG 342 (356)
T COG3424 287 YEESLGLSPE----------------------ALELSWDVLREYGNMSSATVLFVLEDTLQKA--PKSGSRGLMFAMGPG 342 (356)
T ss_pred HHHhcCCCHH----------------------HHHHHHHHHHHhCCccchhhHHHHHHHHHhc--CCCCcceeeeecCCc
Confidence 3456788876 2345667779999999999999999999983 579999999999999
Q ss_pred hhheeeEEEEec
Q 012909 351 LTATMFSLQLQE 362 (453)
Q Consensus 351 ~~~~~~~l~~~~ 362 (453)
+++|..+++|..
T Consensus 343 f~sElvL~~w~~ 354 (356)
T COG3424 343 FCSELVLLDWEG 354 (356)
T ss_pred ceeeeeeEEeec
Confidence 999999999975
No 37
>PLN00415 3-ketoacyl-CoA synthase
Probab=99.96 E-value=8.2e-29 Score=254.42 Aligned_cols=305 Identities=17% Similarity=0.258 Sum_probs=204.3
Q ss_pred CCCceeEEeEEEEEcCC--ceechhHHhhhh---C-CCcCe------e--eEcccceEEe---------ccC--CCCCHH
Q 012909 4 WHPKNVGILALDIYFPP--TCVLQEALEVHD---G-VSKGK------Y--TVGLGQDCMA---------FCS--EVEDVI 58 (453)
Q Consensus 4 ~~~~~vgI~~i~~y~P~--~~v~~~~l~~~~---g-~~~~k------~--~~Gig~r~~a---------v~~--~~ed~~ 58 (453)
.|+..|.+...+.|-|+ ++++.+.+.+.. | .+.+- + +.|||+.... .+. +.....
T Consensus 55 ~~~~~vylvd~~c~~p~~~~~~~~~~~~~~~~~~~~~~~~s~~F~~~i~~rSGlg~et~~p~~~~~~~~~~~~~~~~~e~ 134 (466)
T PLN00415 55 TRSKPVYLVDFSCHQPTDSCKISSETFFNMAKGAQLYTEETIQFMTRILNRSGLGDDTYSPRCMLTSPPTPSMYEARHES 134 (466)
T ss_pred cCCCcEEEEeeeeecCCccccccHHHHHHHHHHcCCCCHHHHHHHHHHHHHcCCCCCeeeCCccccCCCCCChhhhHHHH
Confidence 46788999999999985 467777665442 2 12211 1 3566654321 111 233456
Q ss_pred HHHHH-HHHHHHHHcCCCcCCcCEEEEEcccCCCCCccHHHHHHHHhcccCCCCeeEEeeCC-cChhHHHHHHHHHHHHH
Q 012909 59 SMSLT-VVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTN-ACYGGTAALFNCVNWVE 136 (453)
Q Consensus 59 ~la~~-Aa~~aL~~agi~~~~Id~li~~t~s~~~~~~~~a~~l~~~Lgl~G~~~~~~~dv~~-aC~gg~~AL~~A~~~v~ 136 (453)
+|+.. |++++|+++|++|+|||.||+ ++|+....|+.+..|+++||+ ++++.++++.+ ||+||+.||..|.++++
T Consensus 135 em~i~~A~~~aL~~aGi~p~dID~LIv-s~T~~~~~Pslaa~l~~~LGL--r~~v~~~dL~gmGCsggv~aL~lA~~ll~ 211 (466)
T PLN00415 135 ELVIFGALNSLFKKTGIEPREVGIFIV-NCSLFNPNPSLSSMIVNRYKL--KTDVKTYNLSGMGCSAGAISVDLATNLLK 211 (466)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEE-ECcCCCCCchHHHHHHHHhCC--CCCceEEEeccccchHHHHHHHHHHHHHH
Confidence 77766 778999999999999999985 577876789999999999999 67999999985 99999999999999999
Q ss_pred hCCCCCCeEEEEEeecc----------------------ceeeeecCCCCc----eecc-Cceeeeccccccccc-----
Q 012909 137 SASWDGRYGLVVCTDTA----------------------AVAMLIGPDAPI----AFES-KLRGSHMSHAYDFYK----- 184 (453)
Q Consensus 137 sg~~~~~~aLVv~~d~~----------------------AvA~Ll~~~~~l----~~~~-~~~~~~~~~~~df~~----- 184 (453)
++ ++++||||++|.+ |+|+||+.++.- .++. .+..+++.+..+-|.
T Consensus 212 a~--~~~~aLVVs~E~~S~~~~~~~dr~~lv~n~LFgDGAAAvlLs~~~~~~~~~~~~L~~~vrt~~~~~d~~~~~~~~~ 289 (466)
T PLN00415 212 AN--PNTYAVIVSTENMTLSMYRGNDRSMLVPNCLFRVGGAAVMLSNRSQDRVRSKYELTHIVRTHKGSSDKHYTCAEQK 289 (466)
T ss_pred hC--CCCEEEEEEEecccccccCCCcHhHhccceeecccceEEEEecCcccccCccceeeeEEEecCCCChhhhcceeee
Confidence 99 6699999999985 888999875320 1110 112222221111111
Q ss_pred cCCCCCCc-eecCcchHHHHHHHHHHHHHHHH------------------HHHhhhhcCCCCccC----ccEEEecCcch
Q 012909 185 PNLASEYP-VVDGKLSQTCYLMALDSCYKYFC------------------QKFEKLEGRQFSMLD----VDYFVFHSPYN 241 (453)
Q Consensus 185 p~~~~~~~-~vdG~~s~~~y~~al~~~~~~~~------------------~~~~~~~~~~~~~~d----~d~~v~H~p~~ 241 (453)
-+ ...+. ..=.+.....--+++......+. ++..+ .+......| +++||+|+++.
T Consensus 290 ~d-~~G~~gv~Lsk~lp~va~~~l~~ni~~l~p~vlp~~e~~~~~~~~i~~~~~~-~~~~~~~pd~~~~~~hf~iHpGGr 367 (466)
T PLN00415 290 ED-SKGIVGVALSKELTVVAGDTLKTNLTALGPLVLPLSEKLRFILFLVKSKLFR-LKVSPYVPDFKLCFKHFCIHAGGR 367 (466)
T ss_pred ec-CCCcceEEEChHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHHhhhhhh-ccCCCCCCCccccceeEEecCCcH
Confidence 11 00000 00011111111122222221111 11100 000111123 88999999999
Q ss_pred HHHHHHHHhhhhhhhhccCCchhhHHhhhccCCCCCCccccccchhHHHHHHHHHHHHhhhhcCCCcccccccCccccch
Q 012909 242 KLVQKSFARLFFNDFLRNASSVDEIAKEKLAPYSTLSDVESYQSRDLEKASQQVAKQLYDLKVQPSTLIPKQVGNMYTAS 321 (453)
Q Consensus 242 km~~ka~~~l~~~~~~~~~~~~~~~~~~~l~~~l~l~~e~~~~~~~~~k~~~~~~~~~~~~~~~~s~~~~~~~GN~~taS 321 (453)
++++. +++.|+++++ ++++|+...+++|||+|+|
T Consensus 368 aVLda------------------------ve~~LgL~~~----------------------~le~Sr~vL~r~GN~SSsS 401 (466)
T PLN00415 368 ALLDA------------------------VEKGLGLSEF----------------------DLEPSRMTLHRFGNTSSSS 401 (466)
T ss_pred HHHHH------------------------HHHHcCCCHH----------------------HHHHHHHHHHHhCCchhhh
Confidence 98876 4556677765 4567778889999999999
Q ss_pred HHHHHHHHHhhcCcCCCCCEEEEEEecchhhheeeEEEEec
Q 012909 322 LYAAFASLLHEKHSSLEGKRVIMFSYGSGLTATMFSLQLQE 362 (453)
Q Consensus 322 l~l~L~sll~~~~~~~~Gd~ill~syGsG~~~~~~~l~~~~ 362 (453)
++..|..+... ++.++||++++++||+|++++..++++-.
T Consensus 402 V~yvL~~~~~~-~~~~~Gdrvl~iaFGpGf~~es~v~~~~~ 441 (466)
T PLN00415 402 LWYELAYVEAK-CRVKRGDRVWQLAFGSGFKCNSIVWRALR 441 (466)
T ss_pred HHHHHHHHHhh-ccCCCCCEEEEEEEcCcchhhHhHHHHhc
Confidence 99999999877 67789999999999999999999988755
No 38
>cd00327 cond_enzymes Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction. Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products.
Probab=99.91 E-value=5.2e-24 Score=205.95 Aligned_cols=229 Identities=15% Similarity=0.095 Sum_probs=169.8
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCEEEEEcccCCCCCccHHHHHHHHhcccCCCCeeEEeeCCcChhHHHHHHHHHHHHH
Q 012909 57 VISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCVNWVE 136 (453)
Q Consensus 57 ~~~la~~Aa~~aL~~agi~~~~Id~li~~t~s~~~~~~~~a~~l~~~Lgl~G~~~~~~~dv~~aC~gg~~AL~~A~~~v~ 136 (453)
..+|+.+|++++|+++|+++++||.|+++++++....|+.+.+|+..+|+ . +.+++++.++|++++.||..|.++|+
T Consensus 7 ~~~l~~~A~~~al~~ag~~~~~i~~li~~~~~~~~~~~~~a~~i~~~lg~--~-~~~~~~i~~~C~s~~~al~~A~~~i~ 83 (254)
T cd00327 7 ASELGFEAAEQAIADAGLSKGPIVGVIVGTTGGSGEFSGAAGQLAYHLGI--S-GGPAYSVNQACATGLTALALAVQQVQ 83 (254)
T ss_pred HHHHHHHHHHHHHHHcCCCCCCceEEEEEECCCCccccHHHHHHHHHhCC--C-CCCcceeccHhHHHHHHHHHHHHHHH
Confidence 78999999999999999999999999999999987689999999999998 3 88999999999999999999999999
Q ss_pred hCCCCCCeEEEEEeecc-----ceeeeecCCCCc-eec--c--CceeeeccccccccccCCCCCCceecCcchHHHHHHH
Q 012909 137 SASWDGRYGLVVCTDTA-----AVAMLIGPDAPI-AFE--S--KLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMA 206 (453)
Q Consensus 137 sg~~~~~~aLVv~~d~~-----AvA~Ll~~~~~l-~~~--~--~~~~~~~~~~~df~~p~~~~~~~~vdG~~s~~~y~~a 206 (453)
+|.. ++|||+++|.. |+|+||++.+.. ... + .+.+...... +. ...+ .. +...
T Consensus 84 ~g~~--~~~lv~~~e~~~~gdGAaa~vL~~~~~a~~~~~~~~~~i~~~~~~~~-----~~--~~~~----~~----~~~~ 146 (254)
T cd00327 84 NGKA--DIVLAGGSEEFVFGDGAAAAVVESEEHALRRGAHPQAEIVSTAATFD-----GA--SMVP----AV----SGEG 146 (254)
T ss_pred CCCC--CEEEEEecceeeecceEEEEEECcHHHHHHCCCceEEEEEEEEEcCC-----CC--CCCC----CC----ChHH
Confidence 9965 99999999987 889999876321 000 0 0111111110 10 0000 01 2334
Q ss_pred HHHHHHHHHHHHhhhhcCCCCccCccEEEecCcchHHHHHHHHhhhhhhhhccCCchhhHHhhhccCCCCCCccccccch
Q 012909 207 LDSCYKYFCQKFEKLEGRQFSMLDVDYFVFHSPYNKLVQKSFARLFFNDFLRNASSVDEIAKEKLAPYSTLSDVESYQSR 286 (453)
Q Consensus 207 l~~~~~~~~~~~~~~~~~~~~~~d~d~~v~H~p~~km~~ka~~~l~~~~~~~~~~~~~~~~~~~l~~~l~l~~e~~~~~~ 286 (453)
+.++.+.++++. ++.++|+|++++|+++.++.....+.+.. +.+
T Consensus 147 ~~~~i~~~l~~a------g~~~~did~~~~h~~~~~~~~~~~~~~~~------------------------~~~------ 190 (254)
T cd00327 147 LARAARKALEGA------GLTPSDIDYVEAHGTGTPIGDAVELALGL------------------------DPD------ 190 (254)
T ss_pred HHHHHHHHHHHc------CCCHHHCCEEEccCCcCccccHHHHHHHH------------------------HHh------
Confidence 445555555443 58899999999999999988774443321 100
Q ss_pred hHHHHHHHHHHHHhhhhcC--CCcccccccCccccchHHHHHHHHHhhcCcCC-------CCCEEEEEEecchhhheeeE
Q 012909 287 DLEKASQQVAKQLYDLKVQ--PSTLIPKQVGNMYTASLYAAFASLLHEKHSSL-------EGKRVIMFSYGSGLTATMFS 357 (453)
Q Consensus 287 ~~~k~~~~~~~~~~~~~~~--~s~~~~~~~GN~~taSl~l~L~sll~~~~~~~-------~Gd~ill~syGsG~~~~~~~ 357 (453)
+.. +......++||+++||.++.|+.++.. .+.. +|++++++++|.|.++++.+
T Consensus 191 ----------------~~~~~~~~~~~~~~G~~~~as~~~~l~~~~~~-~~~~~~~~~~~~~~~~l~~~~g~Gg~~~~~~ 253 (254)
T cd00327 191 ----------------GVRSPAVSATLIMTGHPLGAAGLAILDELLLM-LEHEFIPPTPREPRTVLLLGFGLGGTNAAVV 253 (254)
T ss_pred ----------------CCCCCceeccccccccchHHHHHHHHHHHHHH-HhCCCcCCCCCCcCEEEEeeEcCCCcceEEE
Confidence 010 122334799999999999999999876 3443 79999999999999998865
Q ss_pred E
Q 012909 358 L 358 (453)
Q Consensus 358 l 358 (453)
+
T Consensus 254 l 254 (254)
T cd00327 254 L 254 (254)
T ss_pred C
Confidence 3
No 39
>cd00825 decarbox_cond_enzymes decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction. Members are involved in the synthesis of fatty acids and polyketides, a diverse group of natural products. Both pathways are an iterative series of additions of small carbon units, usually acetate, to a nascent acyl group. There are 2 classes of decarboxylating condensing enzymes, which can be distinguished by sequence similarity, type of active site residues and type of primer units (acetyl CoA or acyl carrier protein (ACP) linked units).
Probab=99.84 E-value=5.3e-20 Score=184.98 Aligned_cols=231 Identities=14% Similarity=0.108 Sum_probs=160.1
Q ss_pred HHHHHHHHHHHHHHHcCCC----cCCcCEEEEEcccCCCC---------------------CccHHHHHHHHhcccCCCC
Q 012909 57 VISMSLTVVTSLLEKYKID----PTQIGRLEVGSETVIDK---------------------SKSIKTFLMQIFEKYGNTD 111 (453)
Q Consensus 57 ~~~la~~Aa~~aL~~agi~----~~~Id~li~~t~s~~~~---------------------~~~~a~~l~~~Lgl~G~~~ 111 (453)
..+|++.|++++|+++|++ +++||.|+++|.++... .++.+..|+..||+ +
T Consensus 11 ~~~l~~~aa~~aL~~Ag~~~~~~~~~i~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl----~ 86 (332)
T cd00825 11 VSILGFEAAERAIADAGLSREYQKNPIVGVVVGTGGGSPRFQVFGADAMRAVGPYVVTKAMFPGASGQIATPLGI----H 86 (332)
T ss_pred HHHHHHHHHHHHHHHcCCCccccCCCCEEEEEEeCCccHHHHhhhhccccccCcchhhcccchHHHHHHHHHhCC----C
Confidence 7899999999999999999 99999999999877654 67888999999997 4
Q ss_pred eeEEeeCCcChhHHHHHHHHHHHHHhCCCCCCeEEEEEeecc------------------------------------ce
Q 012909 112 IEGVDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDTA------------------------------------AV 155 (453)
Q Consensus 112 ~~~~dv~~aC~gg~~AL~~A~~~v~sg~~~~~~aLVv~~d~~------------------------------------Av 155 (453)
.+++++.++|++++.||+.|..+|++|.. +++||+++|.. |+
T Consensus 87 g~~~~v~~~cas~~~al~~A~~~i~~g~~--~~~Lv~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~gdGaa 164 (332)
T cd00825 87 GPAYDVSAACAGSLHALSLAADAVQNGKQ--DIVLAGGSEELAAPMDCEFDAMGALSTPEKASRTFDAAADGFVFGDGAG 164 (332)
T ss_pred CCccccccHhHHHHHHHHHHHHHHHcCCC--CEEEEeccccccCHHHHHHHhhccccCCCCCCCCCCCCCCCEEEEeeEE
Confidence 56788899999999999999999999966 99999999863 56
Q ss_pred eeeecCCCCce-ec----cCceeeeccccccccccCCCCCCceecCcchHHHHHHHHHHHHHHHHHHHhhhhcCCCCccC
Q 012909 156 AMLIGPDAPIA-FE----SKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKYFCQKFEKLEGRQFSMLD 230 (453)
Q Consensus 156 A~Ll~~~~~l~-~~----~~~~~~~~~~~~df~~p~~~~~~~~vdG~~s~~~y~~al~~~~~~~~~~~~~~~~~~~~~~d 230 (453)
|+||++.+... -. ..+.+..+. ..+. ....+. . ....+..+.+..+++ ++++++|
T Consensus 165 A~vL~~~~~a~~~~~~~~~~i~~~~~~-----~~~~-~~~~~~----~----~~~~~~~~i~~al~~------agl~~~d 224 (332)
T cd00825 165 ALVVEELEHALARGAHIYAEIVGTAAT-----IDGA-GMGAFA----P----SAEGLARAAKEALAV------AGLTVWD 224 (332)
T ss_pred EEEECcHHHHHHCCCeEEEEEEEEEEc-----cCCC-CCCCCC----c----CHHHHHHHHHHHHHH------cCCCHhH
Confidence 66776543210 00 001111110 1111 000000 0 123333444444443 4689999
Q ss_pred ccEEEecCcchHHHHHHHHhhhhhhhhccCCchhhHHhhhccCCCCCCccccccchhHHHHHHHHHHHHhhhhcCCCccc
Q 012909 231 VDYFVFHSPYNKLVQKSFARLFFNDFLRNASSVDEIAKEKLAPYSTLSDVESYQSRDLEKASQQVAKQLYDLKVQPSTLI 310 (453)
Q Consensus 231 ~d~~v~H~p~~km~~ka~~~l~~~~~~~~~~~~~~~~~~~l~~~l~l~~e~~~~~~~~~k~~~~~~~~~~~~~~~~s~~~ 310 (453)
||++++|+++.++.++...++.... +..+-.+...+
T Consensus 225 id~~~~h~~~~~~~~~~e~~~~~~~--------------------------------------------~~~~~~~~~~~ 260 (332)
T cd00825 225 IDYLVAHGTGTPIGDVKELKLLRSE--------------------------------------------FGDKSPAVSAT 260 (332)
T ss_pred CCEEEccCCCCCCCCHHHHHHHHHH--------------------------------------------hCCCCceeECC
Confidence 9999999999987766433332110 00000122234
Q ss_pred ccccCccccchHHHHHHHHHhhcCcCC-------------------------CCCEEEEEEecchhhheeeEE
Q 012909 311 PKQVGNMYTASLYAAFASLLHEKHSSL-------------------------EGKRVIMFSYGSGLTATMFSL 358 (453)
Q Consensus 311 ~~~~GN~~taSl~l~L~sll~~~~~~~-------------------------~Gd~ill~syGsG~~~~~~~l 358 (453)
..++||+++||.++.|..++.. .+.. +|++++++++|.|.+++++++
T Consensus 261 ~~~~G~~~aas~~~~l~~~~~~-~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~G~Gg~~~~~vl 332 (332)
T cd00825 261 KAMTGNLSSAAVVLAVDEAVLM-LEHGFIPPSIHIEELDEAGLNIVTETTPRELRTALLNGFGLGGTNATLVL 332 (332)
T ss_pred CcccccchhHhHHHHHHHHHHH-HhcCccCCCCCCCCCCcccCcccCCCCCCCCCEEEEeeecCCCeeEEEeC
Confidence 4799999999999999998875 2333 689999999999999887653
No 40
>PF00195 Chal_sti_synt_N: Chalcone and stilbene synthases, N-terminal domain; InterPro: IPR001099 Synonym(s): Chalcone synthase, Flavonone synthase, 6'-deoxychalcone synthase Naringenin-chalcone synthases (2.3.1.74 from EC) and stilbene synthases (STS) (formerly known as resveratrol synthases) are related plant enzymes. CHS is an important enzyme in flavanoid biosynthesis and STS is a key enzyme in stilbene-type phyloalexin biosynthesis. Both enzymes catalyse the addition of three molecules of malonyl-CoA to a starter CoA ester (a typical example is 4-coumaroyl-CoA), producing either a chalcone (with CHS) or stilbene (with STS) []. These enzymes have a conserved cysteine residue, located in the central section of the protein sequence, which is essential for the catalytic activity of both enzymes and probably represents the binding site for the 4-coumaryl-CoA group [].; GO: 0016746 transferase activity, transferring acyl groups, 0009058 biosynthetic process; PDB: 3EUO_B 3EUT_C 3EUQ_D 3E1H_A 3AWK_A 3AWJ_A 2H84_A 3A5S_A 3A5Q_B 3A5R_A ....
Probab=99.81 E-value=1.1e-19 Score=171.46 Aligned_cols=143 Identities=22% Similarity=0.299 Sum_probs=115.5
Q ss_pred CceeEEeEEEEEcCCceechhHHhhhh----CCCc-----Cee-----eEcccceEEeccCC------------------
Q 012909 6 PKNVGILALDIYFPPTCVLQEALEVHD----GVSK-----GKY-----TVGLGQDCMAFCSE------------------ 53 (453)
Q Consensus 6 ~~~vgI~~i~~y~P~~~v~~~~l~~~~----g~~~-----~k~-----~~Gig~r~~av~~~------------------ 53 (453)
+....|.+||..+|+++++|+++.++. +.+. .++ +.||..|++.++.+
T Consensus 12 ~g~A~Il~IgTA~P~~~~~Q~~~~e~~~~~~~~~~~~~~~~~l~ri~~~sgI~~R~~vl~~~~~~~~p~~~~~~~ps~~~ 91 (226)
T PF00195_consen 12 PGPAYILSIGTAVPPHRITQEEIAEFFFRITHSDDLPDLRRKLRRIFENSGIEKRHSVLPEEWLDEYPSFWDFADPSLAE 91 (226)
T ss_dssp SSSEEEEEEEEE-SSEEEEGCCHHHHHHHHTT-TTGHHHHHHHHHHHHHST-SEEEESS-HHHHHTSGGGHSSSSS-HHH
T ss_pred CCCeEEEEEEEeCCCceecHHHHHHHHHHHhcccchhHHHHHHHhhhhccccceeccccchhhhhcCcchhhccCccHHH
Confidence 457899999999999999999987752 3222 233 47999999876421
Q ss_pred -----CCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEEcccCCCCCccHHHHHHHHhcccCCCCeeEEee-CCcChhHHHH
Q 012909 54 -----VEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDS-TNACYGGTAA 127 (453)
Q Consensus 54 -----~ed~~~la~~Aa~~aL~~agi~~~~Id~li~~t~s~~~~~~~~a~~l~~~Lgl~G~~~~~~~dv-~~aC~gg~~A 127 (453)
.+.+..|+.+|++++|+++|++++||++||+.|+|+.. .|++..+|.+.||| ++++..+.+ ..||+||..|
T Consensus 92 R~~~~~~~a~~L~~~Aa~~AL~~~g~~~~dIthlv~vs~TG~~-~PglD~~l~~~LgL--~~~v~R~~i~~~GC~gg~~~ 168 (226)
T PF00195_consen 92 RNALYAEEAPPLAEEAARKALAEAGLDPSDITHLVTVSCTGIA-APGLDARLINRLGL--RPDVQRTPIFGMGCAGGAAG 168 (226)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTS-GGGECEEEEEESSSSE-CS-HHHHHHHHHT----TTSEEEEEES-GGGHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCCcccceEEEEecCCcC-CCchhHHHHhcCCC--CCCcEEEEEeccchhhHHHH
Confidence 13468999999999999999999999999999999975 89999999999999 889988888 4899999999
Q ss_pred HHHHHHHHHhCCCCCCeEEEEEeecc
Q 012909 128 LFNCVNWVESASWDGRYGLVVCTDTA 153 (453)
Q Consensus 128 L~~A~~~v~sg~~~~~~aLVv~~d~~ 153 (453)
|..|.++++++ |+.+||||++|.+
T Consensus 169 L~~A~~~~~~~--p~a~VLvv~vElc 192 (226)
T PF00195_consen 169 LRRAKDIARAN--PGARVLVVCVELC 192 (226)
T ss_dssp HHHHHHHHHHS--TT-EEEEEEEEEG
T ss_pred HHHHHHHHhCC--ccceEEEEEEEee
Confidence 99999999999 7899999999998
No 41
>PF08541 ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ; InterPro: IPR013747 This domain is found on 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 2.3.1.41 from EC, the enzyme responsible for initiating the chain of reactions of the fatty acid synthase in plants and bacteria. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008610 lipid biosynthetic process; PDB: 3IL3_A 1ZOW_C 3GWE_B 3GWA_B 1UB7_B 3LED_B 2EBD_A 1HNJ_A 2EFT_B 1HN9_B ....
Probab=99.64 E-value=8.5e-17 Score=131.46 Aligned_cols=89 Identities=24% Similarity=0.285 Sum_probs=68.8
Q ss_pred hcCCCCccCccEEEecCcchHHHHHHHHhhhhhhhhccCCchhhHHhhhccCCCCCCccccccchhHHHHHHHHHHHHhh
Q 012909 222 EGRQFSMLDVDYFVFHSPYNKLVQKSFARLFFNDFLRNASSVDEIAKEKLAPYSTLSDVESYQSRDLEKASQQVAKQLYD 301 (453)
Q Consensus 222 ~~~~~~~~d~d~~v~H~p~~km~~ka~~~l~~~~~~~~~~~~~~~~~~~l~~~l~l~~e~~~~~~~~~k~~~~~~~~~~~ 301 (453)
+++|++++|||++++||++.++.+.. .+.+|++.++.+ .+
T Consensus 2 ~~~g~~~~did~~i~hq~~~~~~~~~------------------------~~~lgi~~~~~~---------~~------- 41 (90)
T PF08541_consen 2 ERAGLSPDDIDHFIPHQASKKILDSI------------------------AKRLGIPPERFP---------DN------- 41 (90)
T ss_dssp HHTT--GGGESEEEE-SSSHHHHHHH------------------------HHHHTS-GGGBE----------T-------
T ss_pred ccccCCHHHCCEEEeCCCCHHHHHHH------------------------HHHcCCcHHHHH---------HH-------
Confidence 35679999999999999999998772 233477766321 12
Q ss_pred hhcCCCcccccccCccccchHHHHHHHHHhhcCcCCCCCEEEEEEecchhhheeeEEEE
Q 012909 302 LKVQPSTLIPKQVGNMYTASLYAAFASLLHEKHSSLEGKRVIMFSYGSGLTATMFSLQL 360 (453)
Q Consensus 302 ~~~~~s~~~~~~~GN~~taSl~l~L~sll~~~~~~~~Gd~ill~syGsG~~~~~~~l~~ 360 (453)
.+++||++++|+|++|++++++ +++++||+|+++++|+|+++++++++|
T Consensus 42 ---------~~~~Gn~~sa~~~~~L~~~~~~-g~~~~Gd~vl~~~~G~G~~~~~~~~~~ 90 (90)
T PF08541_consen 42 ---------LAEYGNTGSASIPINLADALEE-GRIKPGDRVLLVGFGAGFSWGAAVLRW 90 (90)
T ss_dssp ---------HHHH-B-GGGHHHHHHHHHHHT-TSSCTTEEEEEEEEETTTEEEEEEEE-
T ss_pred ---------HhccCcchhhhHHHHHHHHHHc-CCCCCCCEEEEEEEEhhheeEEEEEEC
Confidence 2799999999999999999998 789999999999999999999999986
No 42
>PF08392 FAE1_CUT1_RppA: FAE1/Type III polyketide synthase-like protein; InterPro: IPR013601 This domain is found in proteins that are described as 3-ketoacyl-CoA synthases, type III polyketide synthases, fatty acid elongases and fatty acid condensing enzymes, and are found in both prokaryotic and eukaryotic (mainly plant) species. The region contains the active site residues, as well as motifs involved in substrate binding []. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0006633 fatty acid biosynthetic process, 0016020 membrane
Probab=99.63 E-value=2.6e-15 Score=145.71 Aligned_cols=156 Identities=22% Similarity=0.362 Sum_probs=128.7
Q ss_pred CCCCceeEEeEEEEEcCCc--eechhHHhhhhCC----CcC------ee--eEcccceEEeccCC------C-------C
Q 012909 3 SWHPKNVGILALDIYFPPT--CVLQEALEVHDGV----SKG------KY--TVGLGQDCMAFCSE------V-------E 55 (453)
Q Consensus 3 ~~~~~~vgI~~i~~y~P~~--~v~~~~l~~~~g~----~~~------k~--~~Gig~r~~av~~~------~-------e 55 (453)
+.|+..|.+...+.|-|+. +++.+.+.+.... +++ |+ +.|+|.+.. +|+. + +
T Consensus 3 ~~R~r~VYLvDfac~kP~~~~~v~~~~~~e~~~~~~~f~~~sl~F~~kIlerSGlG~eTy-~P~~~~~~p~~~s~~~a~~ 81 (290)
T PF08392_consen 3 MRRPRPVYLVDFACYKPPDELRVSREEFIEHARRCGRFDEESLDFQRKILERSGLGDETY-LPPALHEIPPDPSLAAARE 81 (290)
T ss_pred cCCCCCEEEEeeeecCCCcccccCHHHHHHHHHhcccCChhHHHHHHHHHHhcCCCcccc-CCcccccCCCcccHHHHHH
Confidence 4678899999999999964 6788887776432 222 22 579998875 2221 1 2
Q ss_pred CHHHHHHHHHHHHHHHcCCCcCCcCEEEEEcccCCCCCccHHHHHHHHhcccCCCCeeEEeeC-CcChhHHHHHHHHHHH
Q 012909 56 DVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDST-NACYGGTAALFNCVNW 134 (453)
Q Consensus 56 d~~~la~~Aa~~aL~~agi~~~~Id~li~~t~s~~~~~~~~a~~l~~~Lgl~G~~~~~~~dv~-~aC~gg~~AL~~A~~~ 134 (453)
.+..+...|++++|+++|++|+|||.||+.+++ ....||++++|++++|+ ..++..+++. +||++|+.+++.|.++
T Consensus 82 Eae~v~f~av~~LL~ktgv~p~dIdiLVvncs~-f~ptPSLsamIvnr~~m--r~di~~~nLsGMGCsAgliai~lA~~l 158 (290)
T PF08392_consen 82 EAEMVIFGAVDDLLAKTGVKPSDIDILVVNCSL-FNPTPSLSAMIVNRYGM--RSDIKSYNLSGMGCSAGLIAIDLAKDL 158 (290)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEEECcC-CCcCCcHHHHHHHHhCC--CcCeeeecccCCcchhhHHHHHHHHHH
Confidence 356688899999999999999999999987655 46789999999999999 8899999995 8999999999999999
Q ss_pred HHhCCCCCCeEEEEEeecc----------------------ceeeeecCCCC
Q 012909 135 VESASWDGRYGLVVCTDTA----------------------AVAMLIGPDAP 164 (453)
Q Consensus 135 v~sg~~~~~~aLVv~~d~~----------------------AvA~Ll~~~~~ 164 (453)
++.+ |+.+||||++|.. ++|+|++..+.
T Consensus 159 L~~~--p~~~ALVVstE~~s~~~Y~G~~rsmlv~NcLFr~GgAAvLLSn~~~ 208 (290)
T PF08392_consen 159 LQAH--PNSYALVVSTENISANWYRGNDRSMLVSNCLFRMGGAAVLLSNKPS 208 (290)
T ss_pred HHhC--CCcEEEEEEEeecccccccCCcHHHhhccccccCCceeEEeecCcc
Confidence 9999 7799999999997 88999987753
No 43
>PRK06147 3-oxoacyl-(acyl carrier protein) synthase; Validated
Probab=99.58 E-value=1.3e-13 Score=140.08 Aligned_cols=287 Identities=14% Similarity=0.027 Sum_probs=175.8
Q ss_pred eeEEeEEEEEcCCce------------echhHHhhhhCCC-cCeee--EcccceEEeccCCCCCHHHHHHHHHHHHHHHc
Q 012909 8 NVGILALDIYFPPTC------------VLQEALEVHDGVS-KGKYT--VGLGQDCMAFCSEVEDVISMSLTVVTSLLEKY 72 (453)
Q Consensus 8 ~vgI~~i~~y~P~~~------------v~~~~l~~~~g~~-~~k~~--~Gig~r~~av~~~~ed~~~la~~Aa~~aL~~a 72 (453)
+|.|.+++...|--. +++.+...+.+.. .+++. +|+..++ + ...+....|+..|++++|+++
T Consensus 4 ~v~I~~~g~vs~lG~~~~~~~aa~ragi~~~~~~~~~~~~~~~~i~~~~~~~~~~--~-~~~~r~~~La~~Al~~aL~~a 80 (348)
T PRK06147 4 ALAIVGSGMVTAVGLDAPSSCAAIRARLDNFQETRFIDPPGGEWLIGAPVPLPPP--W-RGPERLAEMAAPAIAEALEGL 80 (348)
T ss_pred ceEEEecceeecCcCCHHHHHHHHHcccccccccccccCCCCCceEeecCcCCcc--c-CchHHHHHHHHHHHHHHHHhc
Confidence 588999998888544 2333333334443 45663 3454443 3 345678899999999999999
Q ss_pred C-CCcCCcCEEEEEcc-----cCCCCCccHHHHHHHHhcccCCCCeeEEeeCCcChhHHHHHHHHHHHHHhCCCCCCeEE
Q 012909 73 K-IDPTQIGRLEVGSE-----TVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCVNWVESASWDGRYGL 146 (453)
Q Consensus 73 g-i~~~~Id~li~~t~-----s~~~~~~~~a~~l~~~Lgl~G~~~~~~~dv~~aC~gg~~AL~~A~~~v~sg~~~~~~aL 146 (453)
+ +++++||++++.++ .+.+..+..+..+++.||+ ....+.+++..+|.+++.||..|..+|++|.+ +.+|
T Consensus 81 ~~~~~~~i~lil~~~~~~~~~~~~~~~~~~~~~~~~~lG~--~~~~~~~~i~~~casg~~Al~~A~~~i~~G~~--~~~l 156 (348)
T PRK06147 81 PALDASEAPLLLCVAEEERPGRPPDLEERLLRELEARLGL--RLEPGSAVIARGRVSGAVALAQARRLIAAGGC--PRVL 156 (348)
T ss_pred ccccccCCcEEEEeCchhcCCCCcchHHHHHHHHHHHhCC--CCCCCcccccccchHHHHHHHHHHHHHHcCCC--CEEE
Confidence 9 79999999998654 3445556778899999997 34467899999999999999999999999976 9999
Q ss_pred EEEeecc-----------------------------ceeeeecCCCCc-eeccCceeeecccccccc-ccCCCCCCceec
Q 012909 147 VVCTDTA-----------------------------AVAMLIGPDAPI-AFESKLRGSHMSHAYDFY-KPNLASEYPVVD 195 (453)
Q Consensus 147 Vv~~d~~-----------------------------AvA~Ll~~~~~l-~~~~~~~~~~~~~~~df~-~p~~~~~~~~vd 195 (453)
|+++|.. |+++||++.+.. .-...+.+.......|.+ ... . -| .+
T Consensus 157 vgg~d~~~~~~~~~~~~~~~~l~~~~~~~G~v~GEGA~a~vLe~~~~A~~rga~i~a~g~~~~~~~~~~~~-~--~p-~~ 232 (348)
T PRK06147 157 VAGVDSLLTGPTLAHYEARDRLLTSQNSNGFIPGEAAAAVLLGRPAGGEAPGLPLLGLGLGREPAPVGESE-D--LP-LR 232 (348)
T ss_pred EEeeccccCHHHHHHHHHhhccCCCCCCCceeeeceEEEEEEccHhhhhcCCCceEEEEEeecCCCcccCC-C--CC-CC
Confidence 9999964 666666654210 000001111111111211 110 0 01 02
Q ss_pred CcchHHHHHHHHHHHHHHHHHHHhhhhcCCCCccCccEEEecCcchHHHHHHHHhhhhhhhhccCCchhhHHhhhccCCC
Q 012909 196 GKLSQTCYLMALDSCYKYFCQKFEKLEGRQFSMLDVDYFVFHSPYNKLVQKSFARLFFNDFLRNASSVDEIAKEKLAPYS 275 (453)
Q Consensus 196 G~~s~~~y~~al~~~~~~~~~~~~~~~~~~~~~~d~d~~v~H~p~~km~~ka~~~l~~~~~~~~~~~~~~~~~~~l~~~l 275 (453)
| +.+..+++..++ ++++.++||||++.|-...+...+.....+.. .|....+
T Consensus 233 g--------~gl~~ai~~AL~------~agl~~~dId~v~ah~~gt~~~d~~e~~A~~~------------~f~~~~~-- 284 (348)
T PRK06147 233 G--------DGLTQAIRAALA------EAGCGLEDMDYRIADLNGEQYRFKEAALAEMR------------LFRVRKE-- 284 (348)
T ss_pred h--------HHHHHHHHHHHH------HcCCCHHHCCEEEcCCCCCccchHHHHHHHHH------------HhhhccC--
Confidence 2 223334443333 34688999999999988766543322111000 0000000
Q ss_pred CCCccccccchhHHHHHHHHHHHHhhhhcCCCcccccccCccccchHHHHHHHHHhh-cCcCCCCCEEEEEEecchhhhe
Q 012909 276 TLSDVESYQSRDLEKASQQVAKQLYDLKVQPSTLIPKQVGNMYTASLYAAFASLLHE-KHSSLEGKRVIMFSYGSGLTAT 354 (453)
Q Consensus 276 ~l~~e~~~~~~~~~k~~~~~~~~~~~~~~~~s~~~~~~~GN~~taSl~l~L~sll~~-~~~~~~Gd~ill~syGsG~~~~ 354 (453)
.. |-......+||+++|+-.+.|+..+.. .....+|.+++++|-.-.-.-+
T Consensus 285 ~~----------------------------~~~~~k~~~Gh~~aAaG~~~~~~a~~~~~~g~~~g~~~L~~s~~d~g~r~ 336 (348)
T PRK06147 285 FF----------------------------DLWHPAECIGEIGAAIGPALLGVALAASRKGYGPGPNVLCHLSDDDGARA 336 (348)
T ss_pred CC----------------------------ceecchHhhcchHHHHHHHHHHHHHHHHHcCcCCCCcEEEEecCCCCceE
Confidence 00 011122679999999988888764432 1234689999999887554556
Q ss_pred eeEEEEe
Q 012909 355 MFSLQLQ 361 (453)
Q Consensus 355 ~~~l~~~ 361 (453)
+++++-+
T Consensus 337 a~~l~~~ 343 (348)
T PRK06147 337 ALVLEYR 343 (348)
T ss_pred EEEEecc
Confidence 6666543
No 44
>TIGR02845 spore_V_AD stage V sporulation protein AD. Bacillus and Clostridium species contain about 10 % dipicolinic acid (pyridine-2,6-dicarboxylic acid) by weight. This protein family, SpoVAD, belongs to the spoVA operon that is suggested to act in the transport of dipicolinic acid (DPA) from the mother cell, where DPA is synthesized, to the forespore, a process essential to sporulation. Members of this protein family are found, so far, in exactly those species believed capable of endospore formation.
Probab=99.42 E-value=1.7e-11 Score=120.82 Aligned_cols=90 Identities=11% Similarity=0.002 Sum_probs=78.8
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEEcccCCCCCccHHHHHHHHhcccCCCCeeEEeeCCcChhHHHHHHHHH
Q 012909 53 EVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCV 132 (453)
Q Consensus 53 ~~ed~~~la~~Aa~~aL~~agi~~~~Id~li~~t~s~~~~~~~~a~~l~~~Lgl~G~~~~~~~dv~~aC~gg~~AL~~A~ 132 (453)
++....+|+.+|+++||+++|++++|||.+++++. +. .+..++++++.||+ +.+++.+||++++.||.+|.
T Consensus 46 ~EkAe~eLa~eAa~~ALekAGL~~~DID~IIvGdl-~~--Q~~~As~vA~~LGI------P~fdV~~ACSTf~~AL~lAa 116 (327)
T TIGR02845 46 WEKAERKLMEDAVNLALKKANLKKDDVDFFLAGDL-LN--QIITANFVARDLGI------PFLGLYGACSTSMETLALGA 116 (327)
T ss_pred cchhHHHHHHHHHHHHHHHcCCCHHHCCEEEEeCC-CC--cccHHHHHHHHhCC------CEEEEeccCHHHHHHHHHHH
Confidence 35677899999999999999999999999999973 32 34578899999996 35999999999999999999
Q ss_pred HHHHhCCCCCCeEEEEEeecc
Q 012909 133 NWVESASWDGRYGLVVCTDTA 153 (453)
Q Consensus 133 ~~v~sg~~~~~~aLVv~~d~~ 153 (453)
.+|++|.+ ++||||++|..
T Consensus 117 ~lI~SG~a--d~VLVV~Ssh~ 135 (327)
T TIGR02845 117 MLVDGGFA--DRVLAATSSHY 135 (327)
T ss_pred HHHhCCCC--CEEEEEEeccc
Confidence 99999977 99999997654
No 45
>PRK08304 stage V sporulation protein AD; Validated
Probab=99.42 E-value=4.2e-12 Score=125.33 Aligned_cols=100 Identities=14% Similarity=0.040 Sum_probs=88.6
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEEcccCCCCCccHHHHHHHHhcccCCCCeeEEeeCCcChhHHHHHHHHH
Q 012909 53 EVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCV 132 (453)
Q Consensus 53 ~~ed~~~la~~Aa~~aL~~agi~~~~Id~li~~t~s~~~~~~~~a~~l~~~Lgl~G~~~~~~~dv~~aC~gg~~AL~~A~ 132 (453)
+++...+|+.+|++++|+++|++++|||.+++++... .+..++++++.||+ +++++.++|+++..||.+|.
T Consensus 52 wEkAeseLa~eAa~~ALekAGI~~~DID~lI~Gdll~---Q~~sAs~vA~~LGI------Pa~dV~gACST~~~AL~lAa 122 (337)
T PRK08304 52 WEKAERKMMEDAIQQALQKANLKKSDIDYLLAGDLLN---QIISANFAARELGI------PFLGLYGACSTMMESLALGS 122 (337)
T ss_pred ccccHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCC---CcchHHHHHHHhCC------cEEEEeccCHHHHHHHHHHH
Confidence 3567789999999999999999999999999997532 34678899999885 58999999999999999999
Q ss_pred HHHHhCCCCCCeEEEEEeecc---------------------------ceeeeecCCC
Q 012909 133 NWVESASWDGRYGLVVCTDTA---------------------------AVAMLIGPDA 163 (453)
Q Consensus 133 ~~v~sg~~~~~~aLVv~~d~~---------------------------AvA~Ll~~~~ 163 (453)
.+|++|.+ ++||||+++.. |+|+||++..
T Consensus 123 ~lI~SG~a--d~VLVV~Ssh~s~aerqfr~P~eyg~qrp~taqwtvtGAGA~i~~~~~ 178 (337)
T PRK08304 123 MLIDGGFA--DRVLAATSSHFATAERQFRFPTEYGGQRPPTAQWTVTGAGAVLLSREG 178 (337)
T ss_pred HHHhcCCC--CEEEEEEcchhhhhhhhccCchhccccCCCcceEEeeccEEEEEecCC
Confidence 99999977 99999999975 9999998874
No 46
>cd00751 thiolase Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. They are found in prokaryotes and eukaryotes (cytosol, microbodies and mitochondria). There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.
Probab=99.30 E-value=9e-12 Score=128.48 Aligned_cols=96 Identities=10% Similarity=0.133 Sum_probs=86.8
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEEcccCCCCCccHHHHHHHHhcccCCCCeeEEeeCCcChhHHHHHHHHHH
Q 012909 54 VEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCVN 133 (453)
Q Consensus 54 ~ed~~~la~~Aa~~aL~~agi~~~~Id~li~~t~s~~~~~~~~a~~l~~~Lgl~G~~~~~~~dv~~aC~gg~~AL~~A~~ 133 (453)
+++..+|+.+|++++|+++|++++|||.|++++.++....+..+..++..||+ ..+++++++.++|++++.||..|..
T Consensus 19 ~~~~~~La~~A~~~AL~dAgl~~~dID~vi~~~~~~~~~~~~~a~~v~~~lGl--~~~~~~~~v~~~c~s~~~al~~A~~ 96 (386)
T cd00751 19 DVSADDLGAAVIKALLERAGLDPEEVDDVIMGNVLQAGEGQNPARQAALLAGL--PESVPATTVNRVCGSGLQAVALAAQ 96 (386)
T ss_pred CCCHHHHHHHHHHHHHHhcCCCHHHCCEEEEEeccCCCCCChHHHHHHHHcCC--CCCCchhhhccccHHHHHHHHHHHH
Confidence 58899999999999999999999999999999877655567778889999998 3458899999999999999999999
Q ss_pred HHHhCCCCCCeEEEEEeecc
Q 012909 134 WVESASWDGRYGLVVCTDTA 153 (453)
Q Consensus 134 ~v~sg~~~~~~aLVv~~d~~ 153 (453)
+|++|.. ++|||+++|.+
T Consensus 97 ~I~sG~~--~~vLv~g~e~~ 114 (386)
T cd00751 97 SIAAGEA--DVVVAGGVESM 114 (386)
T ss_pred HHHCCCC--CeEEEeeeecc
Confidence 9999977 99999999976
No 47
>TIGR01930 AcCoA-C-Actrans acetyl-CoA acetyltransferases. This model represents a large family of enzymes which catalyze the thiolysis of a linear fatty acid CoA (or acetoacetyl-CoA) using a second CoA molecule to produce acetyl-CoA and a CoA-ester product two carbons shorter (or, alternatively, the condensation of two molecules of acetyl-CoA to produce acetoacetyl-CoA and CoA). This enzyme is also known as "thiolase", "3-ketoacyl-CoA thiolase", "beta-ketothiolase" and "Fatty oxidation complex beta subunit". When catalyzing the degradative reaction on fatty acids the corresponding EC number is 2.3.1.16. The condensation reaction corresponds to 2.3.1.9. Note that the enzymes which catalyze the condensation are generally not involved in fatty acid biosynthesis, which is carried out by a decarboxylating condensation of acetyl and malonyl esters of acyl carrier proteins. Rather, this activity may produce acetoacetyl-CoA for pathways such as IPP biosynthesis in the absence of sufficient fatt
Probab=99.26 E-value=2.4e-11 Score=125.28 Aligned_cols=96 Identities=13% Similarity=0.170 Sum_probs=86.4
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEEcccCCCCCccHHHHHHHHhcccCCCCeeEEeeCCcChhHHHHHHHHHH
Q 012909 54 VEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCVN 133 (453)
Q Consensus 54 ~ed~~~la~~Aa~~aL~~agi~~~~Id~li~~t~s~~~~~~~~a~~l~~~Lgl~G~~~~~~~dv~~aC~gg~~AL~~A~~ 133 (453)
+++..+|+.+|++++|+++|++++|||.|++++.++....+..+..++..+|+ ..+++++++.++|++++.||..|.+
T Consensus 18 ~~t~~~La~~A~~~Al~dAgl~~~dID~vv~g~~~~~~~~~~~a~~va~~lGl--~~~~~~~~v~~~Casg~~al~~A~~ 95 (386)
T TIGR01930 18 DVSAEDLGAAVIKELLERNPLDPELIDDVIFGNVLQAGEQQNIARQAALLAGL--PESVPAYTVNRQCASGLQAVILAAQ 95 (386)
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCCChHHHHHHHHcCC--CCCceeeeecchhhHHHHHHHHHHH
Confidence 58899999999999999999999999999999877655456778889999998 3468899999999999999999999
Q ss_pred HHHhCCCCCCeEEEEEeecc
Q 012909 134 WVESASWDGRYGLVVCTDTA 153 (453)
Q Consensus 134 ~v~sg~~~~~~aLVv~~d~~ 153 (453)
+|++|.. ++|||+++|.+
T Consensus 96 ~I~sG~~--~~vLv~g~e~~ 113 (386)
T TIGR01930 96 LIRAGEA--DVVVAGGVESM 113 (386)
T ss_pred HHHCCCC--CEEEEEEehhh
Confidence 9999977 99999999976
No 48
>PRK12578 acetyl-CoA acetyltransferase; Provisional
Probab=99.26 E-value=4e-11 Score=123.65 Aligned_cols=108 Identities=17% Similarity=0.152 Sum_probs=92.4
Q ss_pred eEcccceEEeccCCCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEEcccCCCCCccHHHHHHHHhcccCCCCeeEEeeCC
Q 012909 40 TVGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTN 119 (453)
Q Consensus 40 ~~Gig~r~~av~~~~ed~~~la~~Aa~~aL~~agi~~~~Id~li~~t~s~~~~~~~~a~~l~~~Lgl~G~~~~~~~dv~~ 119 (453)
.+|+|+..+.. ..+++..+|+++|++++|+++|+++++||.|++++.++.......+..++..+|+ ++.+.+++.+
T Consensus 5 IvG~g~t~~~~-~~~~~~~eLa~~A~~~AL~dAgi~~~dID~vi~g~~~~~~~~~~~a~~v~~~lGl---~~~~~~~v~~ 80 (385)
T PRK12578 5 VIGVGNSKFGR-RDDVSVQELAWESIKEALNDAGVSQTDIELVVVGSTAYRGIELYPAPIVAEYSGL---TGKVPLRVEA 80 (385)
T ss_pred EEeecccceee-cCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccccccCChHHHHHHHhCC---CCCCeeEEec
Confidence 46888877643 4578899999999999999999999999999999877543233457889999998 4566799999
Q ss_pred cChhHHHHHHHHHHHHHhCCCCCCeEEEEEeecc
Q 012909 120 ACYGGTAALFNCVNWVESASWDGRYGLVVCTDTA 153 (453)
Q Consensus 120 aC~gg~~AL~~A~~~v~sg~~~~~~aLVv~~d~~ 153 (453)
+|++++.||..|...|++|.. ++||||++|.+
T Consensus 81 ~casg~~al~~A~~~I~sG~~--~~vLvvg~e~~ 112 (385)
T PRK12578 81 MCATGLAASLTAYTAVASGLV--DMAIAVGVDKM 112 (385)
T ss_pred cCHHHHHHHHHHHHHHHCCCC--CEEEEEEEeec
Confidence 999999999999999999976 99999999986
No 49
>PRK05656 acetyl-CoA acetyltransferase; Provisional
Probab=99.23 E-value=5.6e-11 Score=122.81 Aligned_cols=110 Identities=12% Similarity=0.127 Sum_probs=92.4
Q ss_pred eEcccceEEecc---CCCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEEcccCCCCCccHHHHHHHHhcccCCCCeeEEe
Q 012909 40 TVGLGQDCMAFC---SEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVD 116 (453)
Q Consensus 40 ~~Gig~r~~av~---~~~ed~~~la~~Aa~~aL~~agi~~~~Id~li~~t~s~~~~~~~~a~~l~~~Lgl~G~~~~~~~d 116 (453)
.+|.+...+.-. ..++++.+|+.+|++++|+++|++|++||.|++|+.++....+..+..++..+|+ +..+++++
T Consensus 6 Ivg~~rTpfgk~~g~~~~~~~~~La~~A~~~AL~~agl~~~dID~vi~g~~~~~~~~~~~a~~va~~lGl--~~~~p~~~ 83 (393)
T PRK05656 6 IVAATRTAIGSFQGSLANIPAVELGAAVIRRLLEQTGLDPAQVDEVILGQVLTAGAGQNPARQAAIKAGL--PHSVPAMT 83 (393)
T ss_pred EEEcccCCccCCCCccCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEecCCCCCCcHHHHHHHHcCC--CCCcceEE
Confidence 345665554321 1357889999999999999999999999999999987643345677889999998 34589999
Q ss_pred eCCcChhHHHHHHHHHHHHHhCCCCCCeEEEEEeecc
Q 012909 117 STNACYGGTAALFNCVNWVESASWDGRYGLVVCTDTA 153 (453)
Q Consensus 117 v~~aC~gg~~AL~~A~~~v~sg~~~~~~aLVv~~d~~ 153 (453)
+.++|++|..|+..|..+|++|.. +.+||+++|.+
T Consensus 84 V~~~Casg~~ai~~A~~~I~sG~~--d~vLv~G~E~m 118 (393)
T PRK05656 84 LNKVCGSGLKALHLAAQAIRCGDA--EVIIAGGQENM 118 (393)
T ss_pred ecccchhHHHHHHHHHHHHHcCCC--CEEEEEEEhhh
Confidence 999999999999999999999976 99999999987
No 50
>PRK08313 acetyl-CoA acetyltransferase; Provisional
Probab=99.22 E-value=5.6e-11 Score=122.52 Aligned_cols=109 Identities=16% Similarity=0.086 Sum_probs=90.3
Q ss_pred eeEcccceEEeccCCCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEEcccCCCCC--ccHHHHHHHHhcccCCCCeeEEe
Q 012909 39 YTVGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKS--KSIKTFLMQIFEKYGNTDIEGVD 116 (453)
Q Consensus 39 ~~~Gig~r~~av~~~~ed~~~la~~Aa~~aL~~agi~~~~Id~li~~t~s~~~~~--~~~a~~l~~~Lgl~G~~~~~~~d 116 (453)
+.+|+|+..+....++++..+|+++|++++|+++|++++|||.|++++ ++...+ ...+..|++.||+ ...++++
T Consensus 6 ~IvG~g~t~~~~~~~~~s~~eL~~eAa~~Al~dAgl~~~dID~iv~~~-~~~~~~~~~~~~~~va~~LGl---~~~~~~~ 81 (386)
T PRK08313 6 AVLGTGQTKYVAKRQDVSMAGLVREAIDRALADAGLTWDDIDAVVVGK-APDFFEGVMMPELFLADALGA---TGKPLIR 81 (386)
T ss_pred EEEEeecCCcCccCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEec-cccccccccCchHHHHHhcCC---CCCceEE
Confidence 356888877622245778999999999999999999999999999987 443211 1234689999998 5678899
Q ss_pred eCCcChhHHHHHHHHHHHHHhCCCCCCeEEEEEeecc
Q 012909 117 STNACYGGTAALFNCVNWVESASWDGRYGLVVCTDTA 153 (453)
Q Consensus 117 v~~aC~gg~~AL~~A~~~v~sg~~~~~~aLVv~~d~~ 153 (453)
+.++|.+|..+++.|...|++|.+ ++||||++|.+
T Consensus 82 v~~~casg~~al~~A~~~I~sG~~--~~vLVvg~e~~ 116 (386)
T PRK08313 82 VHTAGSVGGSTAVVAASLVQSGVY--RRVLAVAWEKQ 116 (386)
T ss_pred EeccCHHHHHHHHHHHHHHHCCCC--CEEEEEEEEEc
Confidence 999999999999999999999977 99999999975
No 51
>PRK12404 stage V sporulation protein AD; Provisional
Probab=99.22 E-value=9.1e-10 Score=108.33 Aligned_cols=169 Identities=14% Similarity=0.105 Sum_probs=112.7
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEEcccCCCCCccHHHHHHHHhcccCCCCeeEEeeCCcChhHHHHHHHHHH
Q 012909 54 VEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCVN 133 (453)
Q Consensus 54 ~ed~~~la~~Aa~~aL~~agi~~~~Id~li~~t~s~~~~~~~~a~~l~~~Lgl~G~~~~~~~dv~~aC~gg~~AL~~A~~ 133 (453)
++...+|+.+|++.||+++|++++|||.+++|+.+.. . ..++++++.||+ + .+++.+||+++..||.+|..
T Consensus 51 EkAE~~L~~EA~~~AL~kAGI~~~DID~i~vGdL~nQ-~--ipssfvar~LGI---P---~~gV~gACSTg~eAL~lAa~ 121 (334)
T PRK12404 51 EKAERKLLEEACSRAIEKAKLRKEDIQFFLAGDLMNQ-I--TPTSFAARTLGI---P---YLGLFGACSTSMEGLALAAL 121 (334)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCC-c--CcHHHHHHHhCC---C---ccceeecCHHHHHHHHHHHH
Confidence 4566789999999999999999999999999987732 2 344599999986 3 48999999999999999999
Q ss_pred HHHhCCCCCCeEEEEEeecc---------------------------ceeeeecCCCCceeccCceeeeccccccccccC
Q 012909 134 WVESASWDGRYGLVVCTDTA---------------------------AVAMLIGPDAPIAFESKLRGSHMSHAYDFYKPN 186 (453)
Q Consensus 134 ~v~sg~~~~~~aLVv~~d~~---------------------------AvA~Ll~~~~~l~~~~~~~~~~~~~~~df~~p~ 186 (453)
+|++|.. ++|||+++-=. |.|+||++... .+.+.+.-...+-|+=.-+
T Consensus 122 ~VaSG~A--d~VLavtsSH~~~aErqfR~P~eyG~Qrp~taqwTvTgaga~~l~~~~~---~~~i~~~T~Gkv~D~g~~d 196 (334)
T PRK12404 122 IVNSGGA--KYVLTGASSHNAAVEKQFRYPTEYGGQKPPTAQWTVTGAGAAILSKTGD---GPRVTSATIGRVVDMGLTD 196 (334)
T ss_pred HHHcCCC--CEEEEEeCcccchhhhhccCcccccCcCCCcccEEEEceEEEEEecCCC---CceEEEEEEEEEEecCCCC
Confidence 9999987 99999987432 99999987642 1112222223334432211
Q ss_pred CCCCCceecCcchHHHHHHHHHHHHHHHHHHHhhhhcCCCCccCccEEEecCcchHHHHHHHHhhh
Q 012909 187 LASEYPVVDGKLSQTCYLMALDSCYKYFCQKFEKLEGRQFSMLDVDYFVFHSPYNKLVQKSFARLF 252 (453)
Q Consensus 187 ~~~~~~~vdG~~s~~~y~~al~~~~~~~~~~~~~~~~~~~~~~d~d~~v~H~p~~km~~ka~~~l~ 252 (453)
+. .|-.-. --.|.+.....|. +-+.+++|.|.++.-- -.++.++.+..|+
T Consensus 197 ~~----nMGaaM----APAA~dti~~h~~-------d~~~~~~~yDlI~TGD-Lg~vG~~i~~~ll 246 (334)
T PRK12404 197 PF----NMGGAM----APAAVDTIEAHLR-------DRQIDASYYDLIVTGD-LGHVGREIAKDLL 246 (334)
T ss_pred cc----cchhhh----hHHHHHHHHHHHH-------HhCCChhhccEEEEcc-hHHHHHHHHHHHH
Confidence 00 111111 1223333333332 3358899999999642 2344444444443
No 52
>PRK08235 acetyl-CoA acetyltransferase; Provisional
Probab=99.22 E-value=6.8e-11 Score=122.12 Aligned_cols=97 Identities=6% Similarity=0.034 Sum_probs=85.0
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEEcccCCCCCccHHHHHHHHhcccCCCCeeEEeeCCcChhHHHHHHHHH
Q 012909 53 EVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCV 132 (453)
Q Consensus 53 ~~ed~~~la~~Aa~~aL~~agi~~~~Id~li~~t~s~~~~~~~~a~~l~~~Lgl~G~~~~~~~dv~~aC~gg~~AL~~A~ 132 (453)
.++++.+|+.+|++++|+++|++|++||.||+|+.++.......+..++..+|+ +.+++++++.++|++|..||..|.
T Consensus 22 ~~~~~~eLa~~A~~~aL~~agl~~~dID~vi~g~~~~~~~~~~~~~~~~~~~Gl--~~~~p~~~V~~~CaSg~~Al~~A~ 99 (393)
T PRK08235 22 KDVKATELGGIAIKEALERANVSAEDVEEVIMGTVLQGGQGQIPSRQAARAAGI--PWEVQTETVNKVCASGLRAVTLAD 99 (393)
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccCCCCCCHHHHHHHHcCC--CCCcceeehhhhhhHHHHHHHHHH
Confidence 367899999999999999999999999999999886522233455677889998 557999999999999999999999
Q ss_pred HHHHhCCCCCCeEEEEEeecc
Q 012909 133 NWVESASWDGRYGLVVCTDTA 153 (453)
Q Consensus 133 ~~v~sg~~~~~~aLVv~~d~~ 153 (453)
.+|++|.. +.|||+++|.+
T Consensus 100 ~~I~sG~~--d~vLvvG~E~m 118 (393)
T PRK08235 100 QIIRAGDA--SVIVAGGMESM 118 (393)
T ss_pred HHHHCCCC--CEEEEEeeecc
Confidence 99999976 99999999987
No 53
>PF02797 Chal_sti_synt_C: Chalcone and stilbene synthases, C-terminal domain; InterPro: IPR012328 Synonym(s): Chalcone synthase, Flavonone synthase, 6'-deoxychalcone synthase Naringenin-chalcone synthases (2.3.1.74 from EC) and stilbene synthases (STS) (formerly known as resveratrol synthases) are related plant enzymes. CHS is an important enzyme in flavanoid biosynthesis and STS is a key enzyme in stilbene-type phyloalexin biosynthesis. Both enzymes catalyze the addition of three molecules of malonyl-CoA to a starter CoA ester (a typical example is 4-coumaroyl-CoA), producing either a chalcone (with CHS) or stilbene (with STS) []. These enzymes have a conserved cysteine residue, located in the central section of the protein sequence, which is essential for the catalytic activity of both enzymes and probably represents the binding site for the 4-coumaryl-CoA group []. This domain of chalcone synthase is reported to be structurally similar to domains in thiolase and beta-ketoacyl synthase. The differences in activity are accounted for by differences in the N-terminal domain. ; GO: 0016746 transferase activity, transferring acyl groups; PDB: 3OV2_A 3OV3_B 1Z1F_A 1Z1E_A 3ALE_C 3OIT_A 2H84_A 1TEE_D 1TED_A 2P0U_A ....
Probab=99.19 E-value=3.7e-11 Score=107.37 Aligned_cols=105 Identities=17% Similarity=0.260 Sum_probs=73.8
Q ss_pred HHHHHHHHHHHHHHhhhhcCCCCccCccEEEecCcchHHHHHHHHhhhhhhhhccCCchhhHHhhhccCCCCCCcccccc
Q 012909 205 MALDSCYKYFCQKFEKLEGRQFSMLDVDYFVFHSPYNKLVQKSFARLFFNDFLRNASSVDEIAKEKLAPYSTLSDVESYQ 284 (453)
Q Consensus 205 ~al~~~~~~~~~~~~~~~~~~~~~~d~d~~v~H~p~~km~~ka~~~l~~~~~~~~~~~~~~~~~~~l~~~l~l~~e~~~~ 284 (453)
+.+...+..++++. +++..|..+|++|.++.|+++.. ++.|+++++
T Consensus 40 ~~i~~~~~~~L~~~------g~~~~~~~~wavHPGG~~ILd~v------------------------~~~L~L~~~---- 85 (151)
T PF02797_consen 40 DNIPPFVEDLLARH------GLSDWDILFWAVHPGGRKILDAV------------------------EEALGLSPE---- 85 (151)
T ss_dssp HHHHHHHHHHHHGG------TCCSGGGSEEEEE-SSHHHHHHH------------------------HHHHTS-GG----
T ss_pred HHHHHHHHHHHhhh------cccccccceeeecCChHHHHHHH------------------------HHHcCCCHH----
Confidence 34555555555443 45544667899999999998773 344566665
Q ss_pred chhHHHHHHHHHHHHhhhhcCCCcccccccCccccchHHHHHHHHHhh---cCcCCC---CCEEEEEEecchhhheeeEE
Q 012909 285 SRDLEKASQQVAKQLYDLKVQPSTLIPKQVGNMYTASLYAAFASLLHE---KHSSLE---GKRVIMFSYGSGLTATMFSL 358 (453)
Q Consensus 285 ~~~~~k~~~~~~~~~~~~~~~~s~~~~~~~GN~~taSl~l~L~sll~~---~~~~~~---Gd~ill~syGsG~~~~~~~l 358 (453)
++++|+.+.+++|||+|+++++.|..+++. .+.... ++++++++||+|++.+++++
T Consensus 86 ------------------~l~~Sr~vLr~yGNmSSaTVlfVL~~~~~~~~~~g~~~~~~g~~~gv~~afGPG~t~E~~lL 147 (151)
T PF02797_consen 86 ------------------QLRASREVLREYGNMSSATVLFVLERMRRKSAEEGAPPPGEGGEWGVMLAFGPGLTIEGMLL 147 (151)
T ss_dssp ------------------GGHHHHHHHHHH-B-GGGHHHHHHHHHHHHHHHTTTSBTTTTBSEEEEEEEETTTEEEEEEE
T ss_pred ------------------HHHHHHHHHHhcCCCCCcchHHHHHHHHhhhhhhcccCCCCCCCeEEEEEECCcceEeeEEE
Confidence 456777888999999999999999999982 122222 48999999999999999999
Q ss_pred EEe
Q 012909 359 QLQ 361 (453)
Q Consensus 359 ~~~ 361 (453)
+-.
T Consensus 148 r~~ 150 (151)
T PF02797_consen 148 RSV 150 (151)
T ss_dssp EE-
T ss_pred eeC
Confidence 854
No 54
>PRK06205 acetyl-CoA acetyltransferase; Provisional
Probab=99.19 E-value=9.4e-11 Score=121.56 Aligned_cols=96 Identities=16% Similarity=0.184 Sum_probs=88.4
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEEcccCCCCCccHHHHHHHHhcccCCCCeeEEeeCCcChhHHHHHHHHHH
Q 012909 54 VEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCVN 133 (453)
Q Consensus 54 ~ed~~~la~~Aa~~aL~~agi~~~~Id~li~~t~s~~~~~~~~a~~l~~~Lgl~G~~~~~~~dv~~aC~gg~~AL~~A~~ 133 (453)
+++..+|+.+|++++|+++|++|++||.|++|+.++....+..+..++..+|+ +.++++++|.++|++|+.|+..|..
T Consensus 23 ~~~~~eLa~~A~~~AL~~agl~~~dID~vv~g~~~~~~~~~~~a~~va~~~Gl--~~~~p~~~V~~~CaSg~~Al~~A~~ 100 (404)
T PRK06205 23 DVPAEELAATVIRALVERTGIDPARIDDVIFGQGYPNGEAPAIGRVAALDAGL--PVTVPGMQLDRRCGSGLQAVITAAM 100 (404)
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCCChHHHHHHHHcCC--CCCCceeehhhhhhHHHHHHHHHHH
Confidence 57899999999999999999999999999999988776677788889999998 4478999999999999999999999
Q ss_pred HHHhCCCCCCeEEEEEeecc
Q 012909 134 WVESASWDGRYGLVVCTDTA 153 (453)
Q Consensus 134 ~v~sg~~~~~~aLVv~~d~~ 153 (453)
+|++|.. +.|||+++|.+
T Consensus 101 ~I~sG~~--d~vLv~G~E~m 118 (404)
T PRK06205 101 QVQTGAA--DVVIAGGAESM 118 (404)
T ss_pred HHHcCCC--CEEEEeeehhh
Confidence 9999977 99999999987
No 55
>cd00834 KAS_I_II Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS), type I and II. KASs are responsible for the elongation steps in fatty acid biosynthesis. KASIII catalyses the initial condensation and KAS I and II catalyze further elongation steps by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP.
Probab=99.18 E-value=2.6e-09 Score=110.55 Aligned_cols=91 Identities=11% Similarity=0.083 Sum_probs=73.3
Q ss_pred CHHHHHHHHHHHHHHHcCCCcCCcCE----EEEEcccCCC--------------------------CCccHHHHHHHHhc
Q 012909 56 DVISMSLTVVTSLLEKYKIDPTQIGR----LEVGSETVID--------------------------KSKSIKTFLMQIFE 105 (453)
Q Consensus 56 d~~~la~~Aa~~aL~~agi~~~~Id~----li~~t~s~~~--------------------------~~~~~a~~l~~~Lg 105 (453)
....|++.|++++|+++|+++++||. +++++..+.. ..+..+.+|+..||
T Consensus 70 ~~~~l~~~aa~~AL~dAgl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 149 (406)
T cd00834 70 RFAQFALAAAEEALADAGLDPEELDPERIGVVIGSGIGGLATIEEAYRALLEKGPRRVSPFFVPMALPNMAAGQVAIRLG 149 (406)
T ss_pred HHHHHHHHHHHHHHHHcCCCcccCCccceEEEEccCCcchHHHHHHHHHHHhcCCcccChhHHhhhcccHHHHHHHHHhC
Confidence 34689999999999999999877664 6666654321 12456788999999
Q ss_pred ccCCCCeeEEeeCCcChhHHHHHHHHHHHHHhCCCCCCeEEEEEeec
Q 012909 106 KYGNTDIEGVDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDT 152 (453)
Q Consensus 106 l~G~~~~~~~dv~~aC~gg~~AL~~A~~~v~sg~~~~~~aLVv~~d~ 152 (453)
+. .+.+.+..+|++++.||..|..+|++|.. +.|||+++|.
T Consensus 150 l~----g~~~~v~~acas~~~Al~~A~~~i~~G~~--d~aLvgg~d~ 190 (406)
T cd00834 150 LR----GPNYTVSTACASGAHAIGDAARLIRLGRA--DVVIAGGAEA 190 (406)
T ss_pred CC----CcccccchHHHHHHHHHHHHHHHHHcCCC--CEEEEcCccc
Confidence 82 35678889999999999999999999977 9999998874
No 56
>PRK07108 acetyl-CoA acetyltransferase; Provisional
Probab=99.17 E-value=1.2e-10 Score=120.26 Aligned_cols=97 Identities=12% Similarity=0.150 Sum_probs=87.6
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEEcccCCCCCcc-HHHHHHHHhcccCCCCeeEEeeCCcChhHHHHHHHH
Q 012909 53 EVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKS-IKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNC 131 (453)
Q Consensus 53 ~~ed~~~la~~Aa~~aL~~agi~~~~Id~li~~t~s~~~~~~~-~a~~l~~~Lgl~G~~~~~~~dv~~aC~gg~~AL~~A 131 (453)
.++.+.+|+.+|++++|+++|++|++||.|++|+.++....++ .+..+...+|+ +.++++++|+++|+||..||..|
T Consensus 23 ~~~~~~dL~~~A~~~aL~~agi~~~~ID~vi~G~~~~~~~~~~~~a~~i~~~lGl--~~~~p~~~V~~aCaSg~~Al~~A 100 (392)
T PRK07108 23 NMTHGATLGGHVVQHAVERAKLDPAEVEDVIMGCANPEGATGANIARQIALRAGL--PVTVPGMTVNRFCSSGLQTIALA 100 (392)
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHCCcEEEEEeecccccccHHHHHHHHHcCC--CCCCceeeecchhhHHHHHHHHH
Confidence 4667899999999999999999999999999999887655444 78888888898 55699999999999999999999
Q ss_pred HHHHHhCCCCCCeEEEEEeecc
Q 012909 132 VNWVESASWDGRYGLVVCTDTA 153 (453)
Q Consensus 132 ~~~v~sg~~~~~~aLVv~~d~~ 153 (453)
...|++|.. +.+||+++|.+
T Consensus 101 ~~~I~sG~~--d~vlagGvE~m 120 (392)
T PRK07108 101 AQRVIAGEG--DVFVAGGVESI 120 (392)
T ss_pred HHHHHCCCC--CEEEEEEEecc
Confidence 999999976 99999999988
No 57
>PRK09051 beta-ketothiolase; Provisional
Probab=99.17 E-value=1.4e-10 Score=119.77 Aligned_cols=97 Identities=12% Similarity=0.138 Sum_probs=85.0
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEEcccCCCCC-ccHHHHHHHHhcccCCCCeeEEeeCCcChhHHHHHHHH
Q 012909 53 EVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKS-KSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNC 131 (453)
Q Consensus 53 ~~ed~~~la~~Aa~~aL~~agi~~~~Id~li~~t~s~~~~~-~~~a~~l~~~Lgl~G~~~~~~~dv~~aC~gg~~AL~~A 131 (453)
.+++..+|+.+|++++|+++|++|++||.|++|+.++.... +..+..+...+|+ +.++++++|.++|++|+.|+..|
T Consensus 23 ~~~~~~eL~~~A~~~AL~~agi~~~dID~vi~g~~~~~~~~~~~~a~~~~~~~Gl--~~~~p~~~V~~aCaSg~~Al~~A 100 (394)
T PRK09051 23 KDVAPTDLGATVVREALARAGVDPDQVGHVVFGHVIPTEPRDMYLSRVAAINAGV--PQETPAFNVNRLCGSGLQAIVSA 100 (394)
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHcCEEEEeeeccccCCCccHHHHHHHHcCC--CCCCceEEecccchHHHHHHHHH
Confidence 46789999999999999999999999999999998875433 3455666677787 45689999999999999999999
Q ss_pred HHHHHhCCCCCCeEEEEEeecc
Q 012909 132 VNWVESASWDGRYGLVVCTDTA 153 (453)
Q Consensus 132 ~~~v~sg~~~~~~aLVv~~d~~ 153 (453)
..+|++|.+ +.|||+++|.+
T Consensus 101 ~~~I~sG~~--d~vLvvG~E~m 120 (394)
T PRK09051 101 AQAILLGDA--DVAIGGGAESM 120 (394)
T ss_pred HHHHHcCCC--CEEEEEeehhc
Confidence 999999977 99999999987
No 58
>PRK09052 acetyl-CoA acetyltransferase; Provisional
Probab=99.16 E-value=2e-10 Score=118.73 Aligned_cols=96 Identities=13% Similarity=0.106 Sum_probs=82.7
Q ss_pred CCCHHHHHHHHHHHHHHHc-CCCcCCcCEEEEEcccCCCCCccHHHHH-HHHhcccCCCCeeEEeeCCcChhHHHHHHHH
Q 012909 54 VEDVISMSLTVVTSLLEKY-KIDPTQIGRLEVGSETVIDKSKSIKTFL-MQIFEKYGNTDIEGVDSTNACYGGTAALFNC 131 (453)
Q Consensus 54 ~ed~~~la~~Aa~~aL~~a-gi~~~~Id~li~~t~s~~~~~~~~a~~l-~~~Lgl~G~~~~~~~dv~~aC~gg~~AL~~A 131 (453)
+++..+|+.+|++++|+++ |++|++||.||+|+.++....+.....+ ...+|+ +..+++++|+++|++|..|+..|
T Consensus 28 ~~s~~eLa~~A~~~AL~~a~gl~~~dID~vi~g~~~~~~~~~~~~ar~~~~~~Gl--~~~~p~~~V~~aCaSg~~Al~~A 105 (399)
T PRK09052 28 NTRPDDLLAHVLRSAVAQVPGLDPKLIEDAIVGCAMPEAEQGLNVARIGALLAGL--PNSVGGVTVNRFCASGLQAVAMA 105 (399)
T ss_pred CCCHHHHHHHHHHHHHHhccCcCHHHCCEEEEEecCCCCCCCchHHHHHHHHcCC--CCCCceeeecchhhHHHHHHHHH
Confidence 5789999999999999997 9999999999999887765444555554 455587 34589999999999999999999
Q ss_pred HHHHHhCCCCCCeEEEEEeecc
Q 012909 132 VNWVESASWDGRYGLVVCTDTA 153 (453)
Q Consensus 132 ~~~v~sg~~~~~~aLVv~~d~~ 153 (453)
..+|++|.. +.|||+++|.+
T Consensus 106 ~~~I~sG~~--d~vLv~G~E~m 125 (399)
T PRK09052 106 ADRIRVGEA--DVMIAAGVESM 125 (399)
T ss_pred HHHHHCCCC--CEEEEEEEecc
Confidence 999999977 99999999976
No 59
>PRK06059 lipid-transfer protein; Provisional
Probab=99.14 E-value=2.3e-10 Score=118.49 Aligned_cols=107 Identities=16% Similarity=0.098 Sum_probs=90.6
Q ss_pred eEcccceEEeccCCCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEEcccCCCC-CccHHHHHHHHhcccCCCCeeEEeeC
Q 012909 40 TVGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDK-SKSIKTFLMQIFEKYGNTDIEGVDST 118 (453)
Q Consensus 40 ~~Gig~r~~av~~~~ed~~~la~~Aa~~aL~~agi~~~~Id~li~~t~s~~~~-~~~~a~~l~~~Lgl~G~~~~~~~dv~ 118 (453)
..|.+...+. ..+++..+|+++|++++|+++|+++++||.|++++..+... .+..+..+++.||+ .+++++++.
T Consensus 8 Ivg~~~t~~~--r~~~~~~~La~~A~~~Al~dAgl~~~dId~vi~~~~~~~~~~~~~~a~~va~~lG~---~~~~~~~v~ 82 (399)
T PRK06059 8 ILGAGMHPWG--KWGRDFVEYGVVAARAALADAGLDWRDVQLVVGADTIRNGYPGFVAGATFAQALGW---NGAPVSSSY 82 (399)
T ss_pred EEEecccccC--CCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCccCCccHHHHHHHHhCC---CCCceeccc
Confidence 4567766554 34678899999999999999999999999999887655432 34567899999998 567889999
Q ss_pred CcChhHHHHHHHHHHHHHhCCCCCCeEEEEEeecc
Q 012909 119 NACYGGTAALFNCVNWVESASWDGRYGLVVCTDTA 153 (453)
Q Consensus 119 ~aC~gg~~AL~~A~~~v~sg~~~~~~aLVv~~d~~ 153 (453)
++|++++.||..|..+|++|.. ++|||+++|.+
T Consensus 83 ~~Casg~~al~~A~~~I~sG~~--~~vLvvg~e~~ 115 (399)
T PRK06059 83 AACASGSQALQSARAQILAGLC--DVALVVGADTT 115 (399)
T ss_pred chhHHHHHHHHHHHHHHHCCCC--CEEEEEEEccc
Confidence 9999999999999999999976 99999999986
No 60
>PRK05790 putative acyltransferase; Provisional
Probab=99.14 E-value=2.9e-10 Score=117.52 Aligned_cols=110 Identities=9% Similarity=0.102 Sum_probs=89.0
Q ss_pred eEcccceEEeccC---CCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEEcccCCCCCccHHHHHHHHhcccCCCCeeEEe
Q 012909 40 TVGLGQDCMAFCS---EVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVD 116 (453)
Q Consensus 40 ~~Gig~r~~av~~---~~ed~~~la~~Aa~~aL~~agi~~~~Id~li~~t~s~~~~~~~~a~~l~~~Lgl~G~~~~~~~d 116 (453)
.+|.+...+.... .++++.+|+.+|++++|+++|++|+|||.|++++.++....+..+..++..+|+ ..++++++
T Consensus 6 IvG~~~tp~~r~~g~~~~~~~~~La~~A~~~AL~dAgl~~~dID~vi~g~~~~~~~~~~~~~~~~~~~gl--~~~~~~~~ 83 (393)
T PRK05790 6 IVSAARTPIGKFGGALKDVSAVELGAIVIKAALERAGVPPEQVDEVIMGQVLQAGAGQNPARQAALKAGL--PVEVPALT 83 (393)
T ss_pred EEeeecCCccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCeEEEEEecCCCCCCcHHHHHHHHcCC--CCCCceee
Confidence 4566666554211 258899999999999999999999999999999876533333445556667787 34678999
Q ss_pred eCCcChhHHHHHHHHHHHHHhCCCCCCeEEEEEeecc
Q 012909 117 STNACYGGTAALFNCVNWVESASWDGRYGLVVCTDTA 153 (453)
Q Consensus 117 v~~aC~gg~~AL~~A~~~v~sg~~~~~~aLVv~~d~~ 153 (453)
+.++|+++..||..|..+|++|.. +.|||+++|.+
T Consensus 84 v~~~Casg~~al~~A~~~I~sG~~--d~vLv~G~e~~ 118 (393)
T PRK05790 84 INKVCGSGLKAVALAAQAIRAGDA--DIVVAGGQESM 118 (393)
T ss_pred ecccchHHHHHHHHHHHHHHcCCC--CEEEEEeeecc
Confidence 999999999999999999999977 99999999975
No 61
>cd00829 SCP-x_thiolase Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; SCP-2 has multiple roles in intracellular lipid circulation and metabolism. The N-terminal presequence in the SCP-x isoform represents a peroxisomal 3-ketacyl-Coa thiolase specific for branched-chain acyl CoAs, which is proteolytically cleaved from the sterol carrier protein.
Probab=99.12 E-value=2.6e-10 Score=117.05 Aligned_cols=106 Identities=14% Similarity=0.129 Sum_probs=92.2
Q ss_pred cccceEEeccCCCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEEcccCCCCCccHHHHHHHHhcccCCCCeeEEeeCCcC
Q 012909 42 GLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNAC 121 (453)
Q Consensus 42 Gig~r~~av~~~~ed~~~la~~Aa~~aL~~agi~~~~Id~li~~t~s~~~~~~~~a~~l~~~Lgl~G~~~~~~~dv~~aC 121 (453)
|+|+..+.. ..+.+..+|+++|++++|+++|+++++||.|++++..+....+..+..++..+|+ +.++.+++.++|
T Consensus 2 G~g~t~~~~-~~~~~~~eL~~~A~~~Al~dagl~~~~Id~vi~g~~~~~~~~~~~a~~va~~lGl---~~~~~~~v~~~c 77 (375)
T cd00829 2 GVGMTPFGR-RSDRSPLELAAEAARAALDDAGLEPADIDAVVVGNAAGGRFQSFPGALIAEYLGL---LGKPATRVEAAG 77 (375)
T ss_pred eeeecCccc-CCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEecccccccccchHHHHHHHcCC---CCcceeeEeCcc
Confidence 566666542 2367899999999999999999999999999999876654456788999999998 478899999999
Q ss_pred hhHHHHHHHHHHHHHhCCCCCCeEEEEEeecc
Q 012909 122 YGGTAALFNCVNWVESASWDGRYGLVVCTDTA 153 (453)
Q Consensus 122 ~gg~~AL~~A~~~v~sg~~~~~~aLVv~~d~~ 153 (453)
.++..++..|..+|++|.. +.|||+++|.+
T Consensus 78 ~sg~~al~~Aa~~I~sG~~--~~vlv~g~e~~ 107 (375)
T cd00829 78 ASGSAAVRAAAAAIASGLA--DVVLVVGAEKM 107 (375)
T ss_pred HHHHHHHHHHHHHHHhCCC--CEEEEEEEeec
Confidence 9999999999999999966 99999999987
No 62
>PRK06065 acetyl-CoA acetyltransferase; Provisional
Probab=99.12 E-value=3.6e-10 Score=116.59 Aligned_cols=110 Identities=13% Similarity=0.056 Sum_probs=92.3
Q ss_pred eeeEcccceEEeccCCCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEEcccC-CCCCccHHHHHHHHhcccCCCCeeEEe
Q 012909 38 KYTVGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETV-IDKSKSIKTFLMQIFEKYGNTDIEGVD 116 (453)
Q Consensus 38 k~~~Gig~r~~av~~~~ed~~~la~~Aa~~aL~~agi~~~~Id~li~~t~s~-~~~~~~~a~~l~~~Lgl~G~~~~~~~d 116 (453)
-+.+|+|+..+.. ..+++..+|+.+|++++|+++|++++|||.+++++... ....+..+..+++.||+ .+.++++
T Consensus 11 vaIvG~g~t~~~~-~~~~~~~~L~~~A~~~Al~dagl~~~dID~~i~~~~~~~~~~~~~~a~~l~~~lG~---~~~~~~~ 86 (392)
T PRK06065 11 VAVIGAGLTLFRR-RLLETPQELAWEAASKALDEAGLELKDIDCVVIGSAPDAFDGVHMKGEYLSHGSGG---IRKPVSR 86 (392)
T ss_pred eEEEEecccCCcC-CCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEeccCCcccccccHHHHHHHHcCC---CCCCeEE
Confidence 3467899887653 35788999999999999999999999999999986311 12245577889999997 4578899
Q ss_pred eCCcChhHHHHHHHHHHHHHhCCCCCCeEEEEEeecc
Q 012909 117 STNACYGGTAALFNCVNWVESASWDGRYGLVVCTDTA 153 (453)
Q Consensus 117 v~~aC~gg~~AL~~A~~~v~sg~~~~~~aLVv~~d~~ 153 (453)
+.++|++|..||..|...|++|.. ++||||++|++
T Consensus 87 V~~~gasG~~al~~A~~~I~sG~a--d~vLVvg~e~~ 121 (392)
T PRK06065 87 VYVGGATGVMTAIAGWYHVASGLC--QKVLAVAEEKM 121 (392)
T ss_pred EecCchhHHHHHHHHHHHHhCCCC--CEEEEEEeecc
Confidence 999999999999999999999987 99999999985
No 63
>PRK08170 acetyl-CoA acetyltransferase; Provisional
Probab=99.12 E-value=4.7e-10 Score=117.11 Aligned_cols=110 Identities=10% Similarity=0.086 Sum_probs=91.2
Q ss_pred eEcccceEEecc---CCCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEEcccCCCCCccHHHHHHHHhcccCCCCeeEEe
Q 012909 40 TVGLGQDCMAFC---SEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVD 116 (453)
Q Consensus 40 ~~Gig~r~~av~---~~~ed~~~la~~Aa~~aL~~agi~~~~Id~li~~t~s~~~~~~~~a~~l~~~Lgl~G~~~~~~~d 116 (453)
.+|.+...+... ..+.++.+|+.+|++++|+++|+++++||.|++++.++....+..+..++..+|+ +.++++++
T Consensus 7 Ivg~~rTp~g~~~g~~~~~~~~~L~~~A~~~Al~dAgl~~~dID~vi~g~~~~~~~~~~~a~~v~~~lGl--~~~~p~~~ 84 (426)
T PRK08170 7 IVDGARTPFLKARGGPGPFSASDLAVAAGRALLNRQPFAPDDLDEVILGCAMPSPDEANIARVVALRLGC--GEKVPAWT 84 (426)
T ss_pred EEecCCCCccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCcChHHHHHHHHhCc--CCCceeee
Confidence 345565554321 1146889999999999999999999999999999876543345677889999998 45789999
Q ss_pred eCCcChhHHHHHHHHHHHHHhCCCCCCeEEEEEeecc
Q 012909 117 STNACYGGTAALFNCVNWVESASWDGRYGLVVCTDTA 153 (453)
Q Consensus 117 v~~aC~gg~~AL~~A~~~v~sg~~~~~~aLVv~~d~~ 153 (453)
+.++|++++.|+..|..+|++|.. +.|||+++|.+
T Consensus 85 v~~~CaSg~~al~~A~~~I~sG~~--d~vLv~G~E~m 119 (426)
T PRK08170 85 VQRNCASGMQALDSAAANIALGRA--DLVLAGGVEAM 119 (426)
T ss_pred ccchhhHHHHHHHHHHHHHHCCCC--CEEEEEEEecc
Confidence 999999999999999999999976 99999999976
No 64
>PRK08242 acetyl-CoA acetyltransferase; Validated
Probab=99.11 E-value=3.9e-10 Score=116.55 Aligned_cols=97 Identities=12% Similarity=0.140 Sum_probs=85.1
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEEcccCCCC-CccHHHHHHHHhcccCCCCeeEEeeCCcChhHHHHHHHH
Q 012909 53 EVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDK-SKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNC 131 (453)
Q Consensus 53 ~~ed~~~la~~Aa~~aL~~agi~~~~Id~li~~t~s~~~~-~~~~a~~l~~~Lgl~G~~~~~~~dv~~aC~gg~~AL~~A 131 (453)
.+.++.+|+..|++++|+++|++|++||.||+|+.++... ....+......+|+ +.++++++|+++|+||+.||.+|
T Consensus 24 ~~~~~~dLa~~A~~~al~~agi~p~~ID~vi~G~~~~~~~~~~~~~r~a~~~~Gl--~~~~pa~~Vn~aCaSg~~Ai~~A 101 (402)
T PRK08242 24 HEVKPVRLAAGLLEALRDRNGLDTAAVDDVVLGCVTPVGDQGADIARTAVLAAGL--PETVPGVQINRFCASGLEAVNLA 101 (402)
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCHHHcCEEEEEecCCCccccccHHHHHHHHcCC--CCCCCeEEEcchhhhHHHHHHHH
Confidence 4567899999999999999999999999999999887543 23455666677787 56799999999999999999999
Q ss_pred HHHHHhCCCCCCeEEEEEeecc
Q 012909 132 VNWVESASWDGRYGLVVCTDTA 153 (453)
Q Consensus 132 ~~~v~sg~~~~~~aLVv~~d~~ 153 (453)
.++|++|.. +.+||+++|.+
T Consensus 102 ~~~I~sG~~--d~vLv~G~E~m 121 (402)
T PRK08242 102 AAKVRSGWD--DLVIAGGVESM 121 (402)
T ss_pred HHHHHcCCC--CEEEEEEEEcc
Confidence 999999976 99999999987
No 65
>smart00825 PKS_KS Beta-ketoacyl synthase. The structure of beta-ketoacyl synthase is similar to that of the thiolase family and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains.
Probab=99.09 E-value=2.7e-09 Score=111.21 Aligned_cols=89 Identities=20% Similarity=0.171 Sum_probs=75.5
Q ss_pred HHHHHHHHHHHHHHcCCCcCCcC----EEEEEcccCCCC-------------------CccHHHHHHHHhcccCCCCeeE
Q 012909 58 ISMSLTVVTSLLEKYKIDPTQIG----RLEVGSETVIDK-------------------SKSIKTFLMQIFEKYGNTDIEG 114 (453)
Q Consensus 58 ~~la~~Aa~~aL~~agi~~~~Id----~li~~t~s~~~~-------------------~~~~a~~l~~~Lgl~G~~~~~~ 114 (453)
..|++.|++++|+++|+++++|| .|++++.++.+. .+..+..++..||+ . -+.
T Consensus 88 ~~l~~~aa~~Al~dAGl~~~~id~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~lgl---~-g~~ 163 (424)
T smart00825 88 QRLLLEVAWEALEDAGIDPESLRGSRTGVFVGAMSSDYAELLARDPEDIEGYAATGTARSFIANRISYFFDL---R-GPS 163 (424)
T ss_pred HHHHHHHHHHHHHHcCCChhHcCCCCCEEEEEEcHHHHHHHHhhCccccchhhhccchhHHHHHHHHHHhCC---C-CCc
Confidence 45999999999999999999999 788887654322 34567789999998 2 257
Q ss_pred EeeCCcChhHHHHHHHHHHHHHhCCCCCCeEEEEEeec
Q 012909 115 VDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDT 152 (453)
Q Consensus 115 ~dv~~aC~gg~~AL~~A~~~v~sg~~~~~~aLVv~~d~ 152 (453)
+.+..+|++++.||..|..+|++|.. +.|||+++|.
T Consensus 164 ~~v~~acasg~~Al~~A~~~I~~G~~--d~vlvgg~~~ 199 (424)
T smart00825 164 VTVDTACSSSLVALHLACQSLRSGEC--DMALAGGVNL 199 (424)
T ss_pred cccccHhHHHHHHHHHHHHHHHcCCC--CeeEEeeeee
Confidence 88899999999999999999999977 8999999985
No 66
>PRK06954 acetyl-CoA acetyltransferase; Provisional
Probab=99.07 E-value=7e-10 Score=114.78 Aligned_cols=109 Identities=11% Similarity=0.094 Sum_probs=84.9
Q ss_pred eEcccceEEecc---CCCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEEcccCCCCCccHHHHHHHHhcccC-CCCeeEE
Q 012909 40 TVGLGQDCMAFC---SEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYG-NTDIEGV 115 (453)
Q Consensus 40 ~~Gig~r~~av~---~~~ed~~~la~~Aa~~aL~~agi~~~~Id~li~~t~s~~~~~~~~a~~l~~~Lgl~G-~~~~~~~ 115 (453)
.+|.+...+.-. ..+.++.+|+.+|++++|+++|++|++||.|++|+..+.... .....+..+++ | +.+++++
T Consensus 11 Ivg~~rTpf~k~~g~~~~~~~~eL~~~a~~~aL~~Agi~~~dID~vi~G~~~~~~~~--~~~~~~~~l~a-g~~~~~p~~ 87 (397)
T PRK06954 11 IASAARTPMAAFQGEFASLTAPQLGAAAIAAAVERAGLKPEQIDEVVMGCVLPAGQG--QAPARQAALGA-GLPLSVGCT 87 (397)
T ss_pred EEecccCCccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCHHHcCEEEEEecCCCccc--hHHHHHHHHcC-CCCCCccEe
Confidence 345555544310 135678999999999999999999999999999987654432 22333334443 2 4469999
Q ss_pred eeCCcChhHHHHHHHHHHHHHhCCCCCCeEEEEEeecc
Q 012909 116 DSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDTA 153 (453)
Q Consensus 116 dv~~aC~gg~~AL~~A~~~v~sg~~~~~~aLVv~~d~~ 153 (453)
+|.++|++|..|+..|..+|++|.+ +.+||+++|.+
T Consensus 88 ~V~~aCaSG~~Av~~A~~~I~sG~~--d~vLv~G~E~m 123 (397)
T PRK06954 88 TVNKMCGSGMRAAMFAHDMLVAGSV--DVIVAGGMESM 123 (397)
T ss_pred eccccchHHHHHHHHHHHHHHCCCC--CEEEEEeeecc
Confidence 9999999999999999999999976 99999999987
No 67
>cd00826 nondecarbox_cond_enzymes nondecarboxylating condensing enzymes; In general, thiolases catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.
Probab=99.06 E-value=7e-10 Score=114.62 Aligned_cols=95 Identities=11% Similarity=0.056 Sum_probs=82.8
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEEcccCCCCCccHHH-HHHHHhcccCCCCeeEEeeCCcChhHHHHHHHHH
Q 012909 54 VEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKT-FLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCV 132 (453)
Q Consensus 54 ~ed~~~la~~Aa~~aL~~agi~~~~Id~li~~t~s~~~~~~~~a~-~l~~~Lgl~G~~~~~~~dv~~aC~gg~~AL~~A~ 132 (453)
.+.+.+|+.+|++++|++++++|++||.|++++.++....+..+. .+++.+|+ .++++++|.++|++|+.|+..|.
T Consensus 20 ~~~~~el~~~a~~~Al~~agl~p~dID~vi~g~~~~~~~g~~~~~~~~~~~lg~---~~~p~~~V~~~Casg~~al~~A~ 96 (393)
T cd00826 20 NDLAHEAGAKAIAAALEPAGVAAGAVEEACLGQVLGAGEGQNCAQQAAMHAGGL---QEAPAIGMNNLCGSGLRALALAM 96 (393)
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEccCCcccCcHHHHHHHHcCCC---CCCcEEEecchhHHHHHHHHHHH
Confidence 466799999999999999999999999999998887654444454 36677775 77899999999999999999999
Q ss_pred HHHHhCCCCCCeEEEEEeecc
Q 012909 133 NWVESASWDGRYGLVVCTDTA 153 (453)
Q Consensus 133 ~~v~sg~~~~~~aLVv~~d~~ 153 (453)
.+|++|.. +.+||+++|.+
T Consensus 97 ~~I~sG~~--~~vlv~g~e~~ 115 (393)
T cd00826 97 QLIAGGDA--NCILAGGFEKM 115 (393)
T ss_pred HHHHCCCC--CEEEEEeeecc
Confidence 99999976 99999999987
No 68
>PF00108 Thiolase_N: Thiolase, N-terminal domain; InterPro: IPR020616 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2.3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 1PXT_B 1AFW_B 1WL4_A 1WL5_A 4E1L_B 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2WUA_B ....
Probab=99.06 E-value=8.4e-10 Score=108.04 Aligned_cols=97 Identities=16% Similarity=0.136 Sum_probs=84.7
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEEcccCCCCCccHHHHHHHHhcccCCCCeeEEeeCCcChhHHHHHHHHH
Q 012909 53 EVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCV 132 (453)
Q Consensus 53 ~~ed~~~la~~Aa~~aL~~agi~~~~Id~li~~t~s~~~~~~~~a~~l~~~Lgl~G~~~~~~~dv~~aC~gg~~AL~~A~ 132 (453)
.+.++.+|+..|++.+|++++++|++||.|++|+..+......++..+.-..|+ +..++++.|+++|++|..|+..|.
T Consensus 22 ~~~~~~~L~~~a~~~al~~~~i~~~~Id~v~~G~~~~~~~g~~~ar~~~l~aGl--~~~vp~~~V~~~CaSG~~Av~~a~ 99 (264)
T PF00108_consen 22 ADVSPEDLAAEAVKAALERAGIDPEDIDAVIVGNVLQEGEGQNIARQAALAAGL--PESVPATTVNRACASGLQAVHLAA 99 (264)
T ss_dssp TTS-HHHHHHHHHHHHHHHHTSHGGGEEEEEEE-SSSCTTTCHHHHHHHHHTTS---TTSEEEEEE-GGGHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHhcccchhhhhhcCcccccccccchhhhhhhhhhccc--ccccceeeehhhhhHHHHHHHHhh
Confidence 467889999999999999999999999999999988765566778888888898 678999999999999999999999
Q ss_pred HHHHhCCCCCCeEEEEEeecc
Q 012909 133 NWVESASWDGRYGLVVCTDTA 153 (453)
Q Consensus 133 ~~v~sg~~~~~~aLVv~~d~~ 153 (453)
..|++|.. +.+|++++|.+
T Consensus 100 ~~I~sG~~--dvvlagGvE~m 118 (264)
T PF00108_consen 100 MAIASGEA--DVVLAGGVESM 118 (264)
T ss_dssp HHHHTTS---SEEEEEEEEET
T ss_pred hhhcCCCc--cEEEEeccccc
Confidence 99999976 99999999998
No 69
>PRK06064 acetyl-CoA acetyltransferase; Provisional
Probab=99.05 E-value=1.1e-09 Score=113.14 Aligned_cols=108 Identities=19% Similarity=0.143 Sum_probs=91.5
Q ss_pred eEcccceEEeccCCCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEEcccCCCC--CccHHHHHHHHhcccCCCCeeEEee
Q 012909 40 TVGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDK--SKSIKTFLMQIFEKYGNTDIEGVDS 117 (453)
Q Consensus 40 ~~Gig~r~~av~~~~ed~~~la~~Aa~~aL~~agi~~~~Id~li~~t~s~~~~--~~~~a~~l~~~Lgl~G~~~~~~~dv 117 (453)
.+|.++..+.- ..+++..+|+.+|++++|+++|+++++||.|++++.++... .+..+..++..||+ +.++++++
T Consensus 6 IvG~~~tp~~~-~~~~~~~eLa~~a~~~Al~dagl~~~~Id~vi~g~~~~~~~~~~~~~a~~va~~lGl---~~~~~~~v 81 (389)
T PRK06064 6 IIGVGQTKFGE-LWDVSLRDLAVEAGLEALEDAGIDGKDIDAMYVGNMSAGLFVSQEHIAALIADYAGL---APIPATRV 81 (389)
T ss_pred EEEccccccee-cCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccccccccccHHHHHHHHcCC---CCCCeeEE
Confidence 45677665432 34678999999999999999999999999999988765432 36678889999998 46788999
Q ss_pred CCcChhHHHHHHHHHHHHHhCCCCCCeEEEEEeecc
Q 012909 118 TNACYGGTAALFNCVNWVESASWDGRYGLVVCTDTA 153 (453)
Q Consensus 118 ~~aC~gg~~AL~~A~~~v~sg~~~~~~aLVv~~d~~ 153 (453)
.++|++++.||..|..+|++|.. ++|||+++|.+
T Consensus 82 ~~aCasg~~ai~~A~~~I~sG~~--~~vLv~G~e~~ 115 (389)
T PRK06064 82 EAACASGGAALRQAYLAVASGEA--DVVLAAGVEKM 115 (389)
T ss_pred eCCcHHHHHHHHHHHHHHHCCCC--CEEEEEEEEec
Confidence 99999999999999999999977 99999999975
No 70
>PRK06158 thiolase; Provisional
Probab=99.01 E-value=2e-09 Score=111.00 Aligned_cols=103 Identities=10% Similarity=-0.037 Sum_probs=86.1
Q ss_pred eeeEcccceEEeccCCCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEEcccCCCCCccHHHHHHHHhcccCCCCeeEEee
Q 012909 38 KYTVGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDS 117 (453)
Q Consensus 38 k~~~Gig~r~~av~~~~ed~~~la~~Aa~~aL~~agi~~~~Id~li~~t~s~~~~~~~~a~~l~~~Lgl~G~~~~~~~dv 117 (453)
-+.+|+|+..+.. .++++..+|+.+|++++|+++|++++|||.+++++.. +..++ ..+++.||+ +..+.+++
T Consensus 10 vaIvG~g~t~~~~-~~~~t~~eL~~eA~~~Al~dAgl~~~dID~iv~~~~~--~~~~~--~~la~~lGl---~~~~~~~~ 81 (384)
T PRK06158 10 TAIVGAATAGLGE-APGLSAMELLAQAAHRALADAGLTMADVDGLFTASPD--DALWG--LSVAEYLGI---RPRFVDGT 81 (384)
T ss_pred EEEEEeeecccee-CCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEecCC--CCCcH--HHHHHHcCC---CCeeeccc
Confidence 3467999887643 4578899999999999999999999999999998743 22333 578999998 55778888
Q ss_pred CCcChhHHHHHHHHHHHHHhCCCCCCeEEEEEe
Q 012909 118 TNACYGGTAALFNCVNWVESASWDGRYGLVVCT 150 (453)
Q Consensus 118 ~~aC~gg~~AL~~A~~~v~sg~~~~~~aLVv~~ 150 (453)
..+|+++..+|..|..+|++|.. ++|||+.+
T Consensus 82 ~~g~~s~~~al~~A~~~I~sG~~--d~vLV~~g 112 (384)
T PRK06158 82 MIGGSSFLAHLLPAALALEAGLC--DVALICYG 112 (384)
T ss_pred cCccHHHHHHHHHHHHHHHcCCC--CEEEEeec
Confidence 99999999999999999999977 99999843
No 71
>PRK07516 acetyl-CoA acetyltransferase; Provisional
Probab=99.00 E-value=2.5e-09 Score=110.52 Aligned_cols=109 Identities=18% Similarity=0.156 Sum_probs=86.4
Q ss_pred eeEcccceEEeccCCCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEEcccCCC--CCccHHHHHHHHhcccCCCCeeEEe
Q 012909 39 YTVGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVID--KSKSIKTFLMQIFEKYGNTDIEGVD 116 (453)
Q Consensus 39 ~~~Gig~r~~av~~~~ed~~~la~~Aa~~aL~~agi~~~~Id~li~~t~s~~~--~~~~~a~~l~~~Lgl~G~~~~~~~d 116 (453)
+.+|.+...+.. ..+++..+|+.+|++++|+++|+++++||.|++++..+.. .....+..+...+|+ ..+++++
T Consensus 5 ~Ivg~g~tpfgr-~~~~~~~eL~~eA~~~AL~dAgl~~~dId~vi~g~~~~~~~~~~~~~~~~~~~~~gl---~~~p~~~ 80 (389)
T PRK07516 5 SIVGWAHTPFGK-LDAETLESLIVRVAREALAHAGIAAGDVDGIFLGHFNAGFSPQDFPASLVLQADPAL---RFKPATR 80 (389)
T ss_pred EEEeCCcceeee-cCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEecCCccccccchhHHHHHhcCC---CCCceee
Confidence 346777776653 4568899999999999999999999999999998764221 111222233344565 6788999
Q ss_pred eCCcChhHHHHHHHHHHHHHhCCCCCCeEEEEEeecc
Q 012909 117 STNACYGGTAALFNCVNWVESASWDGRYGLVVCTDTA 153 (453)
Q Consensus 117 v~~aC~gg~~AL~~A~~~v~sg~~~~~~aLVv~~d~~ 153 (453)
+.++|++|+.||..|..+|++|.+ ++|||+++|.+
T Consensus 81 v~~~CaSg~~Al~~A~~~I~sG~~--d~vLvvg~e~~ 115 (389)
T PRK07516 81 VENACATGSAAVYAALDAIEAGRA--RIVLVVGAEKM 115 (389)
T ss_pred eccccHHHHHHHHHHHHHHHCCCC--CEEEEEEehhh
Confidence 999999999999999999999977 99999999986
No 72
>PLN02287 3-ketoacyl-CoA thiolase
Probab=98.98 E-value=2.9e-09 Score=111.67 Aligned_cols=111 Identities=11% Similarity=0.130 Sum_probs=89.6
Q ss_pred eeEcccceEEec--cC--CCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEEcccCCCCCcc-HHHHHHHHhcccCCCCee
Q 012909 39 YTVGLGQDCMAF--CS--EVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKS-IKTFLMQIFEKYGNTDIE 113 (453)
Q Consensus 39 ~~~Gig~r~~av--~~--~~ed~~~la~~Aa~~aL~~agi~~~~Id~li~~t~s~~~~~~~-~a~~l~~~Lgl~G~~~~~ 113 (453)
+.+|.++..+.- .. .+.+..+|+.+|++++|+++|++++|||.|++|+.++....+. .+..+...+|+ +..++
T Consensus 49 ~IVG~grTpfgk~~~g~~~~~s~~eLa~eA~~~AL~dAgl~~~dID~vv~G~~~~~~~~~~~~~r~~a~~~Gl--~~~~p 126 (452)
T PLN02287 49 VIVAAYRTPICKAKRGGFKDTYPDDLLAPVLKAVVEKTGLNPSEVGDIVVGTVLAPGSQRANECRMAAFYAGF--PETVP 126 (452)
T ss_pred EEEEeecCCCccCCCCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeecCcccccchHHHHHHHHCCC--CCCcc
Confidence 345666554431 01 3678999999999999999999999999999998765544344 34466677788 44589
Q ss_pred EEeeCCcChhHHHHHHHHHHHHHhCCCCCCeEEEEEeecc
Q 012909 114 GVDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDTA 153 (453)
Q Consensus 114 ~~dv~~aC~gg~~AL~~A~~~v~sg~~~~~~aLVv~~d~~ 153 (453)
++++..+|++|..|+..|...|++|.. +.|||++.|.+
T Consensus 127 a~~V~~~CaSG~~Ai~~Aa~~I~sG~~--dvvLv~GvE~m 164 (452)
T PLN02287 127 VRTVNRQCSSGLQAVADVAAAIKAGFY--DIGIGAGVESM 164 (452)
T ss_pred eEEEeccCchHHHHHHHHHHHHHcCCC--CeEEEEeEEec
Confidence 999999999999999999999999976 99999999987
No 73
>PRK06289 acetyl-CoA acetyltransferase; Provisional
Probab=98.97 E-value=2.9e-09 Score=110.47 Aligned_cols=107 Identities=18% Similarity=0.137 Sum_probs=82.6
Q ss_pred eEcccceEEec--cCCCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEEcccCCCCC-----ccHHHHHHHHhcccCCCCe
Q 012909 40 TVGLGQDCMAF--CSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKS-----KSIKTFLMQIFEKYGNTDI 112 (453)
Q Consensus 40 ~~Gig~r~~av--~~~~ed~~~la~~Aa~~aL~~agi~~~~Id~li~~t~s~~~~~-----~~~a~~l~~~Lgl~G~~~~ 112 (453)
.+|.+...+.. ...+++..+|+++|++++|+++|++|++||.||++++++.... ++.... ..+++ .++
T Consensus 7 Ivg~~~t~~~r~~~~~~~s~~eLa~eA~~~AL~dAgl~~~dID~vi~g~~~~~~~~~~~~~~~~~~~--~~~~~---~g~ 81 (403)
T PRK06289 7 VLGGYQSDFARNWTKEGRDFADLTREVVDGTLAAAGVDADDIEVVHVGNFFGELFAGQGHLGAMPAT--VHPAL---WGV 81 (403)
T ss_pred EEeCCcCccccccCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccccccchHHHH--HhhcC---CCC
Confidence 34666554432 1257889999999999999999999999999999987664322 111111 22343 356
Q ss_pred eEEeeCCcChhHHHHHHHHHHHHHhCCCCCCeEEEEEeecc
Q 012909 113 EGVDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDTA 153 (453)
Q Consensus 113 ~~~dv~~aC~gg~~AL~~A~~~v~sg~~~~~~aLVv~~d~~ 153 (453)
+++++.++|.+|..||..|..+|++|.+ ++|||+++|.+
T Consensus 82 ~~~~v~~~Casg~~al~~Aa~~I~sG~~--~~VLvvg~e~~ 120 (403)
T PRK06289 82 PASRHEAACASGSVATLAAMADLRAGRY--DVALVVGVELM 120 (403)
T ss_pred ceeecccccHHHHHHHHHHHHHHHcCCC--CEEEEEEEEec
Confidence 7999999999999999999999999977 99999999986
No 74
>PRK07851 acetyl-CoA acetyltransferase; Provisional
Probab=98.95 E-value=4.6e-09 Score=109.00 Aligned_cols=109 Identities=12% Similarity=0.122 Sum_probs=88.8
Q ss_pred eEcccceEEeccC----CCCCHHHHHHHHHHHHHHHc-CCCcCCcCEEEEEcccCC-CCCccHHHHHHHHhcccCCCCee
Q 012909 40 TVGLGQDCMAFCS----EVEDVISMSLTVVTSLLEKY-KIDPTQIGRLEVGSETVI-DKSKSIKTFLMQIFEKYGNTDIE 113 (453)
Q Consensus 40 ~~Gig~r~~av~~----~~ed~~~la~~Aa~~aL~~a-gi~~~~Id~li~~t~s~~-~~~~~~a~~l~~~Lgl~G~~~~~ 113 (453)
.+|.++..+.... .+.+..+|+.+|++++|+++ |++|++||.|++++..+. ...+..+..+...+|+ .+++
T Consensus 6 IvG~~~Tpfg~~~~g~~~~~~~~eL~~~A~~~AL~da~gl~~~dID~vv~g~~~~~~~~g~~~~~~~a~~lGl---~~~p 82 (406)
T PRK07851 6 IVSTARSPIGRAFKGSLKDMRPDDLAAQMVRAALDKVPALDPTDIDDLMLGCGLPGGEQGFNMARVVAVLLGY---DFLP 82 (406)
T ss_pred EEecCCCCcccCCCCccCCCCHHHHHHHHHHHHHHhccCCCHHHCCEEEEEcccccccccCCHHHHHHHHcCC---CCCC
Confidence 4566665543211 25778999999999999996 999999999999864432 2234567789999998 4588
Q ss_pred EEeeCCcChhHHHHHHHHHHHHHhCCCCCCeEEEEEeecc
Q 012909 114 GVDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDTA 153 (453)
Q Consensus 114 ~~dv~~aC~gg~~AL~~A~~~v~sg~~~~~~aLVv~~d~~ 153 (453)
++.+.++|++|..|+..|...|++|.. +.|||+++|.+
T Consensus 83 ~~~v~~~caSG~~av~~Aa~~I~sG~~--d~vLv~G~e~~ 120 (406)
T PRK07851 83 GTTVNRYCSSSLQTTRMAFHAIKAGEG--DVFISAGVETV 120 (406)
T ss_pred eeeeeccchhHHHHHHHHHHHHHCCCC--CEEEEeeEEec
Confidence 999999999999999999999999977 99999999986
No 75
>PRK07661 acetyl-CoA acetyltransferase; Provisional
Probab=98.93 E-value=4.8e-09 Score=108.30 Aligned_cols=96 Identities=8% Similarity=0.028 Sum_probs=83.9
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEEcccCCCC-CccHHHHHHHHhcccCCCCeeEEeeCCcChhHHHHHHHHH
Q 012909 54 VEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDK-SKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCV 132 (453)
Q Consensus 54 ~ed~~~la~~Aa~~aL~~agi~~~~Id~li~~t~s~~~~-~~~~a~~l~~~Lgl~G~~~~~~~dv~~aC~gg~~AL~~A~ 132 (453)
+.+..+|+.+|++++|+++|+.+++||.+++|+..+... .+..+.+++..+|+ +..++++.|.++|++|..|+..|.
T Consensus 24 ~~~~~eLa~~A~~~AL~~ag~~~~dID~vi~g~~~~~~~~g~~~a~~~~~~lGl--~~~~p~~~V~~aCaSG~~Al~~A~ 101 (391)
T PRK07661 24 TVRPDDLGALVVKETLKRAGNYEGPIDDLIIGCAMPEAEQGLNMARNIGALAGL--PYTVPAITINRYCSSGLQSIAYGA 101 (391)
T ss_pred CCCHHHHHHHHHHHHHHhcCCChhHCCEEEEEeccccccccchHHHHHHHHcCC--CCCcceeehhhhhhHHHHHHHHHH
Confidence 447899999999999999998889999999997665433 35677779999998 445999999999999999999999
Q ss_pred HHHHhCCCCCCeEEEEEeecc
Q 012909 133 NWVESASWDGRYGLVVCTDTA 153 (453)
Q Consensus 133 ~~v~sg~~~~~~aLVv~~d~~ 153 (453)
..|++|.. +.+||+++|.+
T Consensus 102 ~~I~sG~~--d~vLv~G~E~m 120 (391)
T PRK07661 102 ERIMLGHS--EAVIAGGAESM 120 (391)
T ss_pred HHHHcCCC--CEEEEEEEeec
Confidence 99999977 99999999976
No 76
>PRK08963 fadI 3-ketoacyl-CoA thiolase; Reviewed
Probab=98.91 E-value=6e-09 Score=108.86 Aligned_cols=110 Identities=18% Similarity=0.176 Sum_probs=89.6
Q ss_pred eEcccceEEecc---CCCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEEcccCCCCCccHHHHHHHHhcccCCCCeeEEe
Q 012909 40 TVGLGQDCMAFC---SEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVD 116 (453)
Q Consensus 40 ~~Gig~r~~av~---~~~ed~~~la~~Aa~~aL~~agi~~~~Id~li~~t~s~~~~~~~~a~~l~~~Lgl~G~~~~~~~d 116 (453)
.+|.+...+.-. ..+.++.+|+.+|++.+|+++|++|++||.+++|+..+....+.++..+...+|+ +..++++.
T Consensus 9 Ivg~~rTpfgk~~g~l~~~~~~eL~~~a~~~al~~agl~~~~ID~vi~G~~~~~~~~~~~ar~~a~~aGl--~~~~P~~t 86 (428)
T PRK08963 9 IVSGLRTPFAKQATAFHGIPAVDLGKMVVGELLARSEIDPELIEQLVFGQVVQMPEAPNIAREIVLGTGM--NVHTDAYS 86 (428)
T ss_pred EEecccCCccCCCCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEeccCCCCCccHHHHHHHHHCCC--CCCCccee
Confidence 345555544321 1456789999999999999999999999999999865433234456668888898 44799999
Q ss_pred eCCcChhHHHHHHHHHHHHHhCCCCCCeEEEEEeecc
Q 012909 117 STNACYGGTAALFNCVNWVESASWDGRYGLVVCTDTA 153 (453)
Q Consensus 117 v~~aC~gg~~AL~~A~~~v~sg~~~~~~aLVv~~d~~ 153 (453)
|.++|++|+.|+..|+..|++|.. +.|||+++|.+
T Consensus 87 V~~aCaSG~~Ai~~Aa~~I~sG~~--dvvLvgG~Esm 121 (428)
T PRK08963 87 VSRACATSFQAVANVAESIMAGTI--DIGIAGGADSS 121 (428)
T ss_pred ehhhhHHHHHHHHHHHHHHHCCCC--CEEEEeccccc
Confidence 999999999999999999999977 99999999987
No 77
>PRK06157 acetyl-CoA acetyltransferase; Validated
Probab=98.91 E-value=1e-08 Score=106.16 Aligned_cols=109 Identities=17% Similarity=0.145 Sum_probs=88.2
Q ss_pred eeEcccceEEeccCCCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEEcccCCCCCccHHHHHHHHhcccCCCCeeEEeeC
Q 012909 39 YTVGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDST 118 (453)
Q Consensus 39 ~~~Gig~r~~av~~~~ed~~~la~~Aa~~aL~~agi~~~~Id~li~~t~s~~~~~~~~a~~l~~~Lgl~G~~~~~~~dv~ 118 (453)
+.+|.+...+.. ..+.+..+|+.+|++++|+++|++++|||.|++++.............+.+.+|+ +.++++.+.
T Consensus 10 ~IvG~g~tp~~~-~~~~~~~~L~~ea~~~AL~dagl~~~dID~v~vg~~~~~~~~~~~~~~~a~~lGl---~~~~~~~v~ 85 (398)
T PRK06157 10 AILGMGCTKFGE-RWDAGAEDLMVEAFLEALADAGIEPKDIDAAWFGTHYDEIGSGKSGTPLSRALRL---PNIPVTRVE 85 (398)
T ss_pred EEEEeccccccc-cCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccchhHHHHHHcCC---CCCCEEEEe
Confidence 345666665432 2356789999999999999999999999999998754322222234678889998 457888999
Q ss_pred CcChhHHHHHHHHHHHHHhCCCCCCeEEEEEeecc
Q 012909 119 NACYGGTAALFNCVNWVESASWDGRYGLVVCTDTA 153 (453)
Q Consensus 119 ~aC~gg~~AL~~A~~~v~sg~~~~~~aLVv~~d~~ 153 (453)
++|++++.|++.|...|++|.. +.+||+++|.+
T Consensus 86 ~~c~sg~~ai~~A~~~I~sG~~--d~vlv~G~e~~ 118 (398)
T PRK06157 86 NFCATGSEAFRGAVYAVASGAY--DIALALGVEKL 118 (398)
T ss_pred cccHHHHHHHHHHHHHHHCCCC--CEEEEEEEeec
Confidence 9999999999999999999977 99999999985
No 78
>TIGR03150 fabF beta-ketoacyl-acyl-carrier-protein synthase II. FabB sequences should fall well below the noise cutoff of this model.
Probab=98.88 E-value=1.1e-07 Score=98.58 Aligned_cols=89 Identities=12% Similarity=0.060 Sum_probs=70.4
Q ss_pred HHHHHHHHHHHHHHcCCCcCCcCE----EEEEcccCCC-----------------C---------CccHHHHHHHHhccc
Q 012909 58 ISMSLTVVTSLLEKYKIDPTQIGR----LEVGSETVID-----------------K---------SKSIKTFLMQIFEKY 107 (453)
Q Consensus 58 ~~la~~Aa~~aL~~agi~~~~Id~----li~~t~s~~~-----------------~---------~~~~a~~l~~~Lgl~ 107 (453)
..|++.|++++|+++|+++++||. +++++..+.. . ....+.++...||+.
T Consensus 72 ~~l~~~aa~~Al~dAgl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl~ 151 (407)
T TIGR03150 72 IQYALAAAKEAVEDSGLDIEEEDAERVGVIIGSGIGGLETIEEQHIVLLEKGPRRVSPFFIPMSIINMAAGQISIRYGAK 151 (407)
T ss_pred HHHHHHHHHHHHHhcCCCcccCCccceEEEEecCCCchHHHHHHHHHHHhcCccccChhhhhcccccHHHHHHHHHhCCC
Confidence 679999999999999999999886 7777643210 0 012445688888872
Q ss_pred CCCCeeEEeeCCcChhHHHHHHHHHHHHHhCCCCCCeEEEEEeec
Q 012909 108 GNTDIEGVDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDT 152 (453)
Q Consensus 108 G~~~~~~~dv~~aC~gg~~AL~~A~~~v~sg~~~~~~aLVv~~d~ 152 (453)
-+.+.+..+|++++.||..|..+|++|.. +.+||+++|.
T Consensus 152 ----g~~~~v~~acaSg~~Al~~A~~~I~~G~~--d~~lvgg~e~ 190 (407)
T TIGR03150 152 ----GPNHAVVTACATGTHAIGDAFRLIQRGDA--DVMIAGGAEA 190 (407)
T ss_pred ----CcccccccHHHHHHHHHHHHHHHHhcCCC--CEEEEecccC
Confidence 34666778999999999999999999976 9999999986
No 79
>PRK06366 acetyl-CoA acetyltransferase; Provisional
Probab=98.88 E-value=1.3e-08 Score=105.20 Aligned_cols=110 Identities=7% Similarity=0.045 Sum_probs=87.3
Q ss_pred eEcccceEEeccCC---CCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEEcccCCCCCccHHHHHHHHhcccCCCCeeEEe
Q 012909 40 TVGLGQDCMAFCSE---VEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVD 116 (453)
Q Consensus 40 ~~Gig~r~~av~~~---~ed~~~la~~Aa~~aL~~agi~~~~Id~li~~t~s~~~~~~~~a~~l~~~Lgl~G~~~~~~~d 116 (453)
.+|.+...+..... +.++.+|+.+|++++|+++|++|++||.+++++..+.......+..+...+|+ +.+++++.
T Consensus 6 Ivg~~rTp~gr~~g~~~~~~~~~L~~~a~~~al~dagi~~~dID~vi~g~~~~~~~~~~~a~~~~~~~Gl--~~~~p~~~ 83 (388)
T PRK06366 6 IVSAKRTAIGKFGRSFSKIKAPQLGGAAIKAVIDDAKLDPALVQEVIMGNVIQAGVGQNPAGQAAYHAGL--PFGVTKYT 83 (388)
T ss_pred EEEcccCCcccCCCcccCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCccCcHHHHHHHHCCC--CCCCccee
Confidence 34666555432111 36789999999999999999999999999998753322123446678888998 45688888
Q ss_pred eCCcChhHHHHHHHHHHHHHhCCCCCCeEEEEEeecc
Q 012909 117 STNACYGGTAALFNCVNWVESASWDGRYGLVVCTDTA 153 (453)
Q Consensus 117 v~~aC~gg~~AL~~A~~~v~sg~~~~~~aLVv~~d~~ 153 (453)
+.++|++|+.|+..|...|++|.. +.|||++.|.+
T Consensus 84 v~~~caSg~~av~~Aa~~I~sG~~--d~vla~G~e~m 118 (388)
T PRK06366 84 VNVVCASGMLAVESAAREIMLGER--DLVIAGGMENM 118 (388)
T ss_pred eechhhHHHHHHHHHHHHHhcCCC--CEEEEEeeEcc
Confidence 999999999999999999999977 89999888975
No 80
>PRK07850 acetyl-CoA acetyltransferase; Provisional
Probab=98.86 E-value=1.5e-08 Score=104.46 Aligned_cols=96 Identities=11% Similarity=0.104 Sum_probs=81.4
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEEcccCCCCC-ccHHHHHHHHhcccCCCCeeEEeeCCcChhHHHHHHHHH
Q 012909 54 VEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKS-KSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCV 132 (453)
Q Consensus 54 ~ed~~~la~~Aa~~aL~~agi~~~~Id~li~~t~s~~~~~-~~~a~~l~~~Lgl~G~~~~~~~dv~~aC~gg~~AL~~A~ 132 (453)
+.++.+|+.+|++.+|+++|++|++||.+++|........ ...+..+...+|+ +.+++++.|.++|++|..|+..|.
T Consensus 23 ~~~~~eL~~~a~~~aL~~agi~~~~Id~v~~G~~~~~~~q~~~~ar~~~l~~Gl--~~~~p~~tV~~~CaSG~~A~~~A~ 100 (387)
T PRK07850 23 GLHAAELLGAVQRAVLDRAGIDPGDVEQVIGGCVTQAGEQSNNITRTAWLHAGL--PYHVGATTIDCQCGSAQQANHLVA 100 (387)
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccchHHHHHHHhCCC--CCCCceEEEecccccHHHHHHHHH
Confidence 4568999999999999999999999999999975432221 2345566666888 457999999999999999999999
Q ss_pred HHHHhCCCCCCeEEEEEeecc
Q 012909 133 NWVESASWDGRYGLVVCTDTA 153 (453)
Q Consensus 133 ~~v~sg~~~~~~aLVv~~d~~ 153 (453)
..|++|.. +.+||++.|.+
T Consensus 101 ~~I~sG~~--dvvla~G~E~m 119 (387)
T PRK07850 101 GLIAAGAI--DVGIACGVEAM 119 (387)
T ss_pred HHHHCCCC--CEEEEEeEecC
Confidence 99999976 99999999987
No 81
>TIGR02446 FadI fatty oxidation complex, beta subunit FadI. This subunit of the FadJI complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit, and YfcY. This protein is almost always located adjacent to FadJ (TIGR02440). The FadJI complex is needed for anaerobic beta-oxidation of short-chain fatty acids in E. coli.
Probab=98.84 E-value=1.3e-08 Score=106.18 Aligned_cols=111 Identities=18% Similarity=0.173 Sum_probs=88.1
Q ss_pred eeEcccceEEecc---CCCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEEcccCCCCCccHHHHHHHHhcccCCCCeeEE
Q 012909 39 YTVGLGQDCMAFC---SEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGV 115 (453)
Q Consensus 39 ~~~Gig~r~~av~---~~~ed~~~la~~Aa~~aL~~agi~~~~Id~li~~t~s~~~~~~~~a~~l~~~Lgl~G~~~~~~~ 115 (453)
|.+|.+...+.-. ..+.+..+|+.+|++.+|+++|++|++||.+++|+..+......++..+.-..|+ +..++++
T Consensus 10 ~Ivg~~rTpfgk~~g~~~~~~~~~L~~~a~~~al~~agl~~~~Id~vi~G~~~~~~~~~~~ar~~~l~aGl--~~~~p~~ 87 (430)
T TIGR02446 10 AIVAGLRTPFARQATAFHGIPAVDLGKMVVSELLARSEIDPKLIEQLVFGQVVQMPEAPNIAREIVLGTGM--NVHTDAY 87 (430)
T ss_pred EEEecccCccccCCCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCcCccchHHHHHHHhCCC--CCCCchh
Confidence 4456665555321 1356789999999999999999999999999999765432223344444444687 4589999
Q ss_pred eeCCcChhHHHHHHHHHHHHHhCCCCCCeEEEEEeecc
Q 012909 116 DSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDTA 153 (453)
Q Consensus 116 dv~~aC~gg~~AL~~A~~~v~sg~~~~~~aLVv~~d~~ 153 (453)
.|.++|++|+.|+..|...|++|.+ +.+||++.|.+
T Consensus 88 ~V~~~CaSG~~A~~~a~~~I~sG~~--dvvla~G~E~m 123 (430)
T TIGR02446 88 SVTRACATSFQSAVNVAESIMAGAI--DIGIAGGADSS 123 (430)
T ss_pred hhhhhhhHHHHHHHHHHHHHHCCCC--CEEEEeeeEcc
Confidence 9999999999999999999999977 99999999998
No 82
>PRK08256 lipid-transfer protein; Provisional
Probab=98.83 E-value=1.5e-08 Score=104.68 Aligned_cols=106 Identities=21% Similarity=0.132 Sum_probs=85.3
Q ss_pred eEcccceEEeccCCCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEEcccCCCCCccHHHHHHHHhcccCCCCeeEEeeCC
Q 012909 40 TVGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTN 119 (453)
Q Consensus 40 ~~Gig~r~~av~~~~ed~~~la~~Aa~~aL~~agi~~~~Id~li~~t~s~~~~~~~~a~~l~~~Lgl~G~~~~~~~dv~~ 119 (453)
..|.+...+.......+..+|+.+|++++|+++|+++++||.+++++..+.... ...+...+|+ ..++++++..
T Consensus 5 IvG~~~t~~~~~~~~~~~~~La~~A~~~Al~dAGl~~~dID~~~~g~~~~~~~~---~~~~~~~lGl---~~~~~~~v~~ 78 (391)
T PRK08256 5 VAGVGMTPFEKPGASWDYPDMAAEAGRAALADAGIDYDAVQQAYVGYVYGDSTS---GQRALYEVGM---TGIPIVNVNN 78 (391)
T ss_pred EEeccccccccCCCCCCHHHHHHHHHHHHHHHcCCChHHCCeeEEEEEeCCcch---hHHHHHHcCC---CCCCCccccc
Confidence 356776665421224678999999999999999999999999999876554321 2245677887 5567789999
Q ss_pred cChhHHHHHHHHHHHHHhCCCCCCeEEEEEeecc
Q 012909 120 ACYGGTAALFNCVNWVESASWDGRYGLVVCTDTA 153 (453)
Q Consensus 120 aC~gg~~AL~~A~~~v~sg~~~~~~aLVv~~d~~ 153 (453)
+|+++..|+..|..+|++|.. +.|||+++|.+
T Consensus 79 ~caSg~~ai~~A~~~I~sG~~--d~vLv~g~e~~ 110 (391)
T PRK08256 79 NCSTGSTALFLARQAVRSGAA--DCALALGFEQM 110 (391)
T ss_pred ccHHHHHHHHHHHHHHHCCCC--CEEEEEEEeec
Confidence 999999999999999999977 99999999976
No 83
>PRK06365 acetyl-CoA acetyltransferase; Provisional
Probab=98.83 E-value=1.9e-08 Score=105.04 Aligned_cols=110 Identities=10% Similarity=-0.036 Sum_probs=87.4
Q ss_pred eeEcccceEEeccCCCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEEcccCCCCCccHH-HHHHHHhcccCCCCeeEEee
Q 012909 39 YTVGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIK-TFLMQIFEKYGNTDIEGVDS 117 (453)
Q Consensus 39 ~~~Gig~r~~av~~~~ed~~~la~~Aa~~aL~~agi~~~~Id~li~~t~s~~~~~~~~a-~~l~~~Lgl~G~~~~~~~dv 117 (453)
+.+|+|...+.-.....+..+|+++|++++|+++|+++++||.+++++.+........+ ..+...||+ +.++++.+
T Consensus 19 aIvG~g~Tpfgr~~~~~~~~eL~~eA~~~Al~dagl~~~dID~vv~~~~~~~~~g~~~~~~~~~~~lGl---~~~~~~~v 95 (430)
T PRK06365 19 YMVAAGVTKFDKASPYMDFRERVKKAFDYAMNDAGLTLADIDGSVASYFSDHFQRQLLAGIMVQDYLGL---VPKPSKRI 95 (430)
T ss_pred EEEEeeecCccccCCCCCHHHHHHHHHHHHHHHcCCCHHHcCEEEEecccccccccchhhHHHHHhcCC---CCCceEEE
Confidence 45677776654323456778999999999999999999999998877644322222222 446789998 45888899
Q ss_pred CCcChhHHHHHHHHHHHHHhCCCCCCeEEEEEeecc
Q 012909 118 TNACYGGTAALFNCVNWVESASWDGRYGLVVCTDTA 153 (453)
Q Consensus 118 ~~aC~gg~~AL~~A~~~v~sg~~~~~~aLVv~~d~~ 153 (453)
.++|+++..|+..|+..|++|.+ +.|||+++|.+
T Consensus 96 ~~~~aSg~~ai~~A~~~I~sG~~--~~vLv~G~e~~ 129 (430)
T PRK06365 96 EGGGATGGLAFQAGYEEIASGRM--DCVAVYGFETM 129 (430)
T ss_pred eCCcHHHHHHHHHHHHHHHcCCC--CEEEEEEeeec
Confidence 99999999999999999999977 99999999976
No 84
>cd00833 PKS polyketide synthases (PKSs) polymerize simple fatty acids into a large variety of different products, called polyketides, by successive decarboxylating Claisen condensations. PKSs can be divided into 2 groups, modular type I PKSs consisting of one or more large multifunctional proteins and iterative type II PKSs, complexes of several monofunctional subunits.
Probab=98.83 E-value=4.6e-08 Score=101.70 Aligned_cols=90 Identities=17% Similarity=0.146 Sum_probs=74.2
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCE----EEEEcccCCC-------------------CCccHHHHHHHHhcccCCCCee
Q 012909 57 VISMSLTVVTSLLEKYKIDPTQIGR----LEVGSETVID-------------------KSKSIKTFLMQIFEKYGNTDIE 113 (453)
Q Consensus 57 ~~~la~~Aa~~aL~~agi~~~~Id~----li~~t~s~~~-------------------~~~~~a~~l~~~Lgl~G~~~~~ 113 (453)
...|++.|++++|+++|+++++++. +++|+.++.+ .....+..+...+|+ . .+
T Consensus 87 ~~~l~~~aa~~AL~dAgl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~~gl---~-g~ 162 (421)
T cd00833 87 QQRLLLEVAWEALEDAGYSPESLAGSRTGVFVGASSSDYLELLARDPDEIDAYAATGTSRAFLANRISYFFDL---R-GP 162 (421)
T ss_pred HHHHHHHHHHHHHHHcCCCchhcCCCCceEEeCcCHHHHHHHHhhcccccCcccccCcchHHHHHHHHHHcCC---C-CC
Confidence 4689999999999999999888774 7777764421 113466789999998 2 36
Q ss_pred EEeeCCcChhHHHHHHHHHHHHHhCCCCCCeEEEEEeec
Q 012909 114 GVDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDT 152 (453)
Q Consensus 114 ~~dv~~aC~gg~~AL~~A~~~v~sg~~~~~~aLVv~~d~ 152 (453)
.+.+..+|++++.||..|..+|++|.+ +.+||+++|.
T Consensus 163 ~~~v~~acas~~~Al~~A~~~I~~G~~--d~~lvgg~~~ 199 (421)
T cd00833 163 SLTVDTACSSSLVALHLACQSLRSGEC--DLALVGGVNL 199 (421)
T ss_pred ceeeccHhHHHHHHHHHHHHHHHcCCC--CeeEEeeeec
Confidence 788899999999999999999999977 9999999986
No 85
>PRK08131 acetyl-CoA acetyltransferase; Provisional
Probab=98.83 E-value=1.7e-08 Score=104.44 Aligned_cols=96 Identities=16% Similarity=0.184 Sum_probs=83.6
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEEcccCCCC-CccHHHHHHHHhcccCCCCeeEEeeCCcChhHHHHHHHHH
Q 012909 54 VEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDK-SKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCV 132 (453)
Q Consensus 54 ~ed~~~la~~Aa~~aL~~agi~~~~Id~li~~t~s~~~~-~~~~a~~l~~~Lgl~G~~~~~~~dv~~aC~gg~~AL~~A~ 132 (453)
+.++.+|+.+|++++|+++|++|++||.+++|+..+... ....+..+...+|+ +..++++.|.++|++|..|+..|.
T Consensus 23 ~~~~~eL~~~a~~~al~~agi~~~~Id~v~~G~~~~~~~~~~~~ar~~~~~~Gl--p~~~p~~tV~~~CaSG~~Ai~~A~ 100 (401)
T PRK08131 23 SVRPDDLAATVIRRLLEKSGFPGDDIEDVILGCTNQAGEDSRNVARNALLLAGL--PVTVPGQTVNRLCASGLAAVIDAA 100 (401)
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccccHHHHHHHhcCC--CCCCceeeeechhhhHHHHHHHHH
Confidence 567899999999999999999999999999998643322 34556667788887 557999999999999999999999
Q ss_pred HHHHhCCCCCCeEEEEEeecc
Q 012909 133 NWVESASWDGRYGLVVCTDTA 153 (453)
Q Consensus 133 ~~v~sg~~~~~~aLVv~~d~~ 153 (453)
..|++|.. +.+||++.|.+
T Consensus 101 ~~I~sG~~--dvvlagG~Esm 119 (401)
T PRK08131 101 RAITCGEG--DLYLAGGVESM 119 (401)
T ss_pred HHHHCCCC--CEEEEEEecCC
Confidence 99999977 99999999987
No 86
>PRK06445 acetyl-CoA acetyltransferase; Provisional
Probab=98.82 E-value=1.3e-08 Score=105.38 Aligned_cols=96 Identities=9% Similarity=0.061 Sum_probs=78.1
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEEcccCCCCCcc-HHHHHHHHhcccCCCCeeEEeeCCcChhHHHHHHHHH
Q 012909 54 VEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKS-IKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCV 132 (453)
Q Consensus 54 ~ed~~~la~~Aa~~aL~~agi~~~~Id~li~~t~s~~~~~~~-~a~~l~~~Lgl~G~~~~~~~dv~~aC~gg~~AL~~A~ 132 (453)
+.++.+|+.+|++++|+++|++|++||.+++++..+....+. .+....-..++ ..+++++++.++|++|..|+..|.
T Consensus 29 ~~~~~~L~~~a~~~AL~~agl~~~dID~vi~g~~~~~~~~~~~~~~~~~l~a~~--~~~~p~~~V~~~CaSg~~ai~~A~ 106 (394)
T PRK06445 29 NIRPEELAAMLINRLIEKTGIKPEEIDDIITGCALQVGENWLYGGRHPIFLARL--PYNIPAMAVDRQCASSLTTVSIGA 106 (394)
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHCCeeEEEeecCCCcccccHHHHHHHHcCC--CCCCcchhhhhhhHHHHHHHHHHH
Confidence 467899999999999999999999999999998876543232 22222222233 246889999999999999999999
Q ss_pred HHHHhCCCCCCeEEEEEeecc
Q 012909 133 NWVESASWDGRYGLVVCTDTA 153 (453)
Q Consensus 133 ~~v~sg~~~~~~aLVv~~d~~ 153 (453)
..|++|.. ++|||+++|.+
T Consensus 107 ~~I~sG~~--d~vLv~G~e~m 125 (394)
T PRK06445 107 MEIATGMA--DIVIAGGVEHM 125 (394)
T ss_pred HHHHcCCC--CEEEEeeeccc
Confidence 99999977 99999999976
No 87
>PLN02644 acetyl-CoA C-acetyltransferase
Probab=98.82 E-value=2.9e-08 Score=102.77 Aligned_cols=96 Identities=8% Similarity=0.044 Sum_probs=81.0
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEEcccCCCCCccHHHHHHHHhcccCCCCeeEEeeCCcChhHHHHHHHHHH
Q 012909 54 VEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCVN 133 (453)
Q Consensus 54 ~ed~~~la~~Aa~~aL~~agi~~~~Id~li~~t~s~~~~~~~~a~~l~~~Lgl~G~~~~~~~dv~~aC~gg~~AL~~A~~ 133 (453)
+.+..+|+++|++++|+++|+++++||.|++++..........+..+...+|+ +.+++++.+.++|.+++.|+..|..
T Consensus 22 ~~~~~~L~~~a~~~al~dAgl~~~~ID~vv~g~~~~~~~~~~~~~~~~~~~Gl--~~~~p~~~v~~~caSg~~av~~Aa~ 99 (394)
T PLN02644 22 SLSATELGSIAIQAALERAGVDPALVQEVFFGNVLSANLGQAPARQAALGAGL--PPSTICTTVNKVCASGMKAVMLAAQ 99 (394)
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCcCCcCCcHHHHHHHhcCC--CCCCceEEEeccchHHHHHHHHHHH
Confidence 46789999999999999999999999999998654322123344567788898 5568888899999999999999999
Q ss_pred HHHhCCCCCCeEEEEEeecc
Q 012909 134 WVESASWDGRYGLVVCTDTA 153 (453)
Q Consensus 134 ~v~sg~~~~~~aLVv~~d~~ 153 (453)
.|++|.. +.|||++.|.+
T Consensus 100 ~I~sG~~--d~vlv~G~E~~ 117 (394)
T PLN02644 100 SIQLGIN--DVVVAGGMESM 117 (394)
T ss_pred HHHcCCC--CEEEEEeEEec
Confidence 9999977 99999999976
No 88
>PRK06633 acetyl-CoA acetyltransferase; Provisional
Probab=98.80 E-value=1.4e-08 Score=104.64 Aligned_cols=96 Identities=10% Similarity=0.143 Sum_probs=83.7
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEEcccCCCCCccHHHHHHHHhcccCCCCeeEEeeCCcChhHHHHHHHHHH
Q 012909 54 VEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCVN 133 (453)
Q Consensus 54 ~ed~~~la~~Aa~~aL~~agi~~~~Id~li~~t~s~~~~~~~~a~~l~~~Lgl~G~~~~~~~dv~~aC~gg~~AL~~A~~ 133 (453)
+..+.+|+.+|++.+|+++|++|++||.+++|...+.......+..+...+|+ +..++++.|.++|++|+.|+..|..
T Consensus 24 ~~~~~~L~~~a~~~al~~agi~~~~Id~vv~G~~~~~~~g~~~~r~~~~~~Gl--~~~~p~~~V~~~CaSG~~Ai~~A~~ 101 (392)
T PRK06633 24 TTPAPMLAAHLIKDILQNSKIDPALVNEVILGQVITGGSGQNPARQTLIHAGI--PKEVPGYTINKVCGSGLKSVALAAN 101 (392)
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHcCEEEEEecCccccccHHHHHHHHHCCC--CCCccchhhcchhHHHHHHHHHHHH
Confidence 56789999999999999999999999999999765433234566667788888 4579999999999999999999999
Q ss_pred HHHhCCCCCCeEEEEEeecc
Q 012909 134 WVESASWDGRYGLVVCTDTA 153 (453)
Q Consensus 134 ~v~sg~~~~~~aLVv~~d~~ 153 (453)
.|++|.. +.+||++.|.+
T Consensus 102 ~I~sG~~--dvvla~G~E~m 119 (392)
T PRK06633 102 SIMTGDN--EIVIAGGQENM 119 (392)
T ss_pred HHHcCCC--CEEEEcccccC
Confidence 9999977 89999999987
No 89
>PRK09050 beta-ketoadipyl CoA thiolase; Validated
Probab=98.80 E-value=2.3e-08 Score=103.57 Aligned_cols=96 Identities=7% Similarity=0.110 Sum_probs=84.3
Q ss_pred CCCHHHHHHHHHHHHHHH-cCCCcCCcCEEEEEcccCCCC-CccHHHHHHHHhcccCCCCeeEEeeCCcChhHHHHHHHH
Q 012909 54 VEDVISMSLTVVTSLLEK-YKIDPTQIGRLEVGSETVIDK-SKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNC 131 (453)
Q Consensus 54 ~ed~~~la~~Aa~~aL~~-agi~~~~Id~li~~t~s~~~~-~~~~a~~l~~~Lgl~G~~~~~~~dv~~aC~gg~~AL~~A 131 (453)
+.++.+|+.+|++.+|++ +|++|++||.|++|+..+... ....+..+...+|+ +.+++++.|.++|++|..|+..|
T Consensus 23 ~~~~~~L~~~a~~~al~~~agi~~~~Id~v~~G~~~~~~~~~~~~ar~~~~~~Gl--~~~vP~~tV~~aCaSG~~Ai~~A 100 (401)
T PRK09050 23 SVRADDLGAVPLKALMARNPGVDWEAVDDVIYGCANQAGEDNRNVARMSALLAGL--PVSVPGTTINRLCGSGMDAVGTA 100 (401)
T ss_pred CCCHHHHHHHHHHHHHHhccCCCHHHCCEEEEEeccccccccchHHHHHHHHcCC--CCCCceEEEecccccHHHHHHHH
Confidence 567899999999999996 799999999999997654222 34577778899998 56799999999999999999999
Q ss_pred HHHHHhCCCCCCeEEEEEeecc
Q 012909 132 VNWVESASWDGRYGLVVCTDTA 153 (453)
Q Consensus 132 ~~~v~sg~~~~~~aLVv~~d~~ 153 (453)
+..|++|.. +.+||++.|.+
T Consensus 101 ~~~I~sG~~--dvvlagGvEsm 120 (401)
T PRK09050 101 ARAIKAGEA--ELMIAGGVESM 120 (401)
T ss_pred HHHHHCCCC--CEEEEeccccc
Confidence 999999977 99999999988
No 90
>cd00828 elong_cond_enzymes "elongating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type I and II and polyketide synthases.They are characterized by the utlization of acyl carrier protein (ACP) thioesters as primer substrates, as well as the nature of their active site residues.
Probab=98.79 E-value=1.4e-07 Score=98.00 Aligned_cols=92 Identities=14% Similarity=0.044 Sum_probs=71.8
Q ss_pred CHHHHHHHHHHHHHHHcCCCcCC-cC----EEEEEcccCC----------------------CCC--ccHHHHHHHHhcc
Q 012909 56 DVISMSLTVVTSLLEKYKIDPTQ-IG----RLEVGSETVI----------------------DKS--KSIKTFLMQIFEK 106 (453)
Q Consensus 56 d~~~la~~Aa~~aL~~agi~~~~-Id----~li~~t~s~~----------------------~~~--~~~a~~l~~~Lgl 106 (453)
....|++.|++++|+++|+++++ ++ .+++++..+. ... ...+.+|...+|+
T Consensus 71 ~~~~l~~~aa~~Al~dAGl~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl 150 (407)
T cd00828 71 RTTLLALVATEEALADAGITDPYEVHPSEVGVVVGSGMGGLRFLRRGGKLDARAVNPYVSPKWMLSPNTVAGWVNILLLS 150 (407)
T ss_pred HHHHHHHHHHHHHHHhCCCCccccCCccCeEEEEeeccCCHHHHHHHHHHHhhccCCcccchhccccchHHHHHHHHhCc
Confidence 35678999999999999998765 43 3555554221 111 4567788889897
Q ss_pred cCCCCeeEEeeCCcChhHHHHHHHHHHHHHhCCCCCCeEEEEEeec
Q 012909 107 YGNTDIEGVDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDT 152 (453)
Q Consensus 107 ~G~~~~~~~dv~~aC~gg~~AL~~A~~~v~sg~~~~~~aLVv~~d~ 152 (453)
..-+.+.+..+|++++.||..|.++|++|.. +.+||+++|.
T Consensus 151 ---~~Gp~~tv~~aCaS~~~Al~~A~~~I~~G~~--d~~lvgg~d~ 191 (407)
T cd00828 151 ---SHGPIKTPVGACATALEALDLAVEAIRSGKA--DIVVVGGVED 191 (407)
T ss_pred ---CCCCCcCcccHHHHHHHHHHHHHHHHHcCCC--CEEEEccccc
Confidence 2446788999999999999999999999977 9999999986
No 91
>PRK13359 beta-ketoadipyl CoA thiolase; Provisional
Probab=98.78 E-value=3.1e-08 Score=102.49 Aligned_cols=96 Identities=10% Similarity=0.127 Sum_probs=84.5
Q ss_pred CCCHHHHHHHHHHHHHHH-cCCCcCCcCEEEEEcccCCCC-CccHHHHHHHHhcccCCCCeeEEeeCCcChhHHHHHHHH
Q 012909 54 VEDVISMSLTVVTSLLEK-YKIDPTQIGRLEVGSETVIDK-SKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNC 131 (453)
Q Consensus 54 ~ed~~~la~~Aa~~aL~~-agi~~~~Id~li~~t~s~~~~-~~~~a~~l~~~Lgl~G~~~~~~~dv~~aC~gg~~AL~~A 131 (453)
..++.+|+..|++.+|++ +|++|++||.||+|+..+... .+..+..+...+|+ +.+++++.|.++|++|+.|+..|
T Consensus 23 ~~~~~~L~~~a~~~al~r~a~i~~~~Id~vi~G~~~~~~~~g~~~ar~~~l~~Gl--~~~vp~~tV~~~CaSG~~Av~~A 100 (400)
T PRK13359 23 SVRADDLGAVPLKALVERNPDVDWAAIDDVIYGCANQAGEDNRNVARMSLLLAGL--PHGVPGSTINRLCGSGMDAVGVA 100 (400)
T ss_pred CCCHHHHHHHHHHHHHHhccCCCHHHCCEEEEEeccccccccccHHHHHHHHcCC--CCCCceEEEeccchhHHHHHHHH
Confidence 356799999999999997 599999999999997654322 36688888899999 56799999999999999999999
Q ss_pred HHHHHhCCCCCCeEEEEEeecc
Q 012909 132 VNWVESASWDGRYGLVVCTDTA 153 (453)
Q Consensus 132 ~~~v~sg~~~~~~aLVv~~d~~ 153 (453)
.+.|++|.. +.+|+++.|.+
T Consensus 101 ~~~I~sG~~--divlagGvEsm 120 (400)
T PRK13359 101 ARAIKSGEA--ALMIAGGVESM 120 (400)
T ss_pred HHHHHcCCC--CEEEEeeeecc
Confidence 999999976 99999999988
No 92
>TIGR02430 pcaF beta-ketoadipyl CoA thiolase. Members of this family are designated beta-ketoadipyl CoA thiolase, an enzyme that acts at the end of pathways for the degradation of protocatechuate (from benzoate and related compounds) and of phenylacetic acid.
Probab=98.78 E-value=4e-08 Score=101.72 Aligned_cols=96 Identities=9% Similarity=0.124 Sum_probs=83.8
Q ss_pred CCCHHHHHHHHHHHHHHH-cCCCcCCcCEEEEEcccCCC-CCccHHHHHHHHhcccCCCCeeEEeeCCcChhHHHHHHHH
Q 012909 54 VEDVISMSLTVVTSLLEK-YKIDPTQIGRLEVGSETVID-KSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNC 131 (453)
Q Consensus 54 ~ed~~~la~~Aa~~aL~~-agi~~~~Id~li~~t~s~~~-~~~~~a~~l~~~Lgl~G~~~~~~~dv~~aC~gg~~AL~~A 131 (453)
+.++.+|+.+|++.+|++ ++++|++||.|++|+..... ..+..+..+...+|+ +.+++++.|.++|++|+.|+..|
T Consensus 22 ~~~~~~L~~~a~~~al~~~a~i~~~~Id~v~~G~~~~~~~~~~~~ar~~~~~~Gl--~~~~p~~~V~~~CaSG~~Ai~~a 99 (400)
T TIGR02430 22 SVRADDLAAVPIKALLARNPQLDWAAIDDVIYGCANQAGEDNRNVARMAALLAGL--PVSVPGTTVNRLCGSGLDAIGMA 99 (400)
T ss_pred CCCHHHHHHHHHHHHHHhccCCCHHHCCEEEEEeccccccccccHHHHHHHHcCC--CCCCceEEeechhhhHHHHHHHH
Confidence 567799999999999995 79999999999999765322 124577779999998 45799999999999999999999
Q ss_pred HHHHHhCCCCCCeEEEEEeecc
Q 012909 132 VNWVESASWDGRYGLVVCTDTA 153 (453)
Q Consensus 132 ~~~v~sg~~~~~~aLVv~~d~~ 153 (453)
...|++|.. +.+|+++.|.+
T Consensus 100 ~~~I~sG~~--d~~la~G~E~m 119 (400)
T TIGR02430 100 ARAIKAGEA--DLLIAGGVESM 119 (400)
T ss_pred HHHHHCCCC--CEEEEeccccc
Confidence 999999976 99999999998
No 93
>PTZ00455 3-ketoacyl-CoA thiolase; Provisional
Probab=98.76 E-value=4.6e-08 Score=102.35 Aligned_cols=98 Identities=13% Similarity=0.097 Sum_probs=81.1
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCcCC--cCEEEEEcccCCC--CCccHHHHHHHHhccc----CCCCeeEEeeCCcChhHH
Q 012909 54 VEDVISMSLTVVTSLLEKYKIDPTQ--IGRLEVGSETVID--KSKSIKTFLMQIFEKY----GNTDIEGVDSTNACYGGT 125 (453)
Q Consensus 54 ~ed~~~la~~Aa~~aL~~agi~~~~--Id~li~~t~s~~~--~~~~~a~~l~~~Lgl~----G~~~~~~~dv~~aC~gg~ 125 (453)
+.+..+|+.+|++++|+++|++|+| ||.+++|+..... ..+.++..+...+|+. |-..++++.+.++|++|+
T Consensus 45 ~~s~~eL~~~a~~~al~~agl~~~d~~ID~vi~G~~~~~~~~~~~~~a~~~~~~~gl~~~~~gl~~~p~~~V~~~caSG~ 124 (438)
T PTZ00455 45 NKTLEELLATAIQGTLENTGLDGKAALVDKVVVGNFLGELFSSQGHLGPAAVGSLGQSGASNALLYKPAMRVEGACASGG 124 (438)
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHCCcCEEEEEeccccccccccchHHHHHHhccCcccccccCCCceeEEECcCHHHH
Confidence 5678999999999999999999999 9999998754321 2345566666565552 116788999999999999
Q ss_pred HHHHHHHHHHHhCCCCCCeEEEEEeecc
Q 012909 126 AALFNCVNWVESASWDGRYGLVVCTDTA 153 (453)
Q Consensus 126 ~AL~~A~~~v~sg~~~~~~aLVv~~d~~ 153 (453)
.|+..|+..|++|.. +.|||+++|.+
T Consensus 125 ~Ai~~A~~~I~sG~~--dvvlv~G~E~m 150 (438)
T PTZ00455 125 LAVQSAWEALLAGTS--DIALVVGVEVQ 150 (438)
T ss_pred HHHHHHHHHHHCCCC--CEEEEEEEeec
Confidence 999999999999977 99999999986
No 94
>PRK06504 acetyl-CoA acetyltransferase; Provisional
Probab=98.74 E-value=5.5e-08 Score=100.37 Aligned_cols=96 Identities=13% Similarity=0.170 Sum_probs=79.3
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEEcccCCCC-CccHHHHHHHHhcccCCCCeeEEeeCCcChhHHHHHHHHH
Q 012909 54 VEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDK-SKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCV 132 (453)
Q Consensus 54 ~ed~~~la~~Aa~~aL~~agi~~~~Id~li~~t~s~~~~-~~~~a~~l~~~Lgl~G~~~~~~~dv~~aC~gg~~AL~~A~ 132 (453)
+.++.+|+.+|++.+|+++|++|++||.+++|+..+... ....+....-..|| +.+++++.|.++|++|..|+..|.
T Consensus 23 ~~~~~~L~~~a~~~al~~a~l~~~~Id~vi~G~~~~~~~~~~~~ar~~~l~~gl--~~~vP~~tV~~~CaSG~~Ai~~A~ 100 (390)
T PRK06504 23 GWHPADLAAQVLDALVDRSGADPALIEDVIMGCVSQVGEQATNVARNAVLASKL--PESVPGTSIDRQCGSSQQALHFAA 100 (390)
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccccHHHHHHHHcCC--CCCCceEEEechhhHHHHHHHHHH
Confidence 567899999999999999999999999999997653221 13344333333366 568999999999999999999999
Q ss_pred HHHHhCCCCCCeEEEEEeecc
Q 012909 133 NWVESASWDGRYGLVVCTDTA 153 (453)
Q Consensus 133 ~~v~sg~~~~~~aLVv~~d~~ 153 (453)
+.|++|.. +.+||++.|.+
T Consensus 101 ~~I~sG~~--dvvLagGvEsm 119 (390)
T PRK06504 101 QAVMSGTM--DIVIAAGVESM 119 (390)
T ss_pred HHHHCCCC--CEEEEeeeeec
Confidence 99999977 99999999987
No 95
>PRK08947 fadA 3-ketoacyl-CoA thiolase; Reviewed
Probab=98.72 E-value=6.1e-08 Score=100.04 Aligned_cols=96 Identities=15% Similarity=0.123 Sum_probs=82.1
Q ss_pred CCCHHHHHHHHHHHHHHH-cCCCcCCcCEEEEEcccCCCC-CccHHHHHHHHhcccCCCCeeEEeeCCcChhHHHHHHHH
Q 012909 54 VEDVISMSLTVVTSLLEK-YKIDPTQIGRLEVGSETVIDK-SKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNC 131 (453)
Q Consensus 54 ~ed~~~la~~Aa~~aL~~-agi~~~~Id~li~~t~s~~~~-~~~~a~~l~~~Lgl~G~~~~~~~dv~~aC~gg~~AL~~A 131 (453)
+.+..+|+..|++.+|++ +|++|++||.+++|+...... ....+..+...+|+ +..++++.|.++|++|..|+..|
T Consensus 24 ~~~~~~L~~~~~~~al~~~agl~~~~Id~vi~g~~~~~~~~g~~~ar~~~~~~Gl--~~~~p~~~V~~~caSG~~Ai~~A 101 (387)
T PRK08947 24 NVRAEDLSAHLMRSLLARNPALDPAEIDDIIWGCVQQTLEQGFNIARNAALLAGI--PHSVPAVTVNRLCGSSMQALHDA 101 (387)
T ss_pred CCCHHHHHHHHHHHHHHhccCcChHHhCeEEEEeccccccccccHHHHHHHHcCC--CCCCcceeeechhHHHHHHHHHH
Confidence 567899999999999997 799999999999997653222 23456667788888 45699999999999999999999
Q ss_pred HHHHHhCCCCCCeEEEEEeecc
Q 012909 132 VNWVESASWDGRYGLVVCTDTA 153 (453)
Q Consensus 132 ~~~v~sg~~~~~~aLVv~~d~~ 153 (453)
...|++|.. +.+||++.|.+
T Consensus 102 ~~~I~sG~~--d~vlv~G~E~m 121 (387)
T PRK08947 102 ARAIMTGDG--DVFLIGGVEHM 121 (387)
T ss_pred HHHHHCCCC--CEEEEcccccc
Confidence 999999977 99999999977
No 96
>PRK06501 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=98.70 E-value=1.6e-06 Score=90.64 Aligned_cols=140 Identities=12% Similarity=0.014 Sum_probs=89.6
Q ss_pred CceeEEeEEEEEcCCceechhHHhhhh--CC---Cc------CeeeEcccceEEeccC----CCCCHHHHHHHHHHHHHH
Q 012909 6 PKNVGILALDIYFPPTCVLQEALEVHD--GV---SK------GKYTVGLGQDCMAFCS----EVEDVISMSLTVVTSLLE 70 (453)
Q Consensus 6 ~~~vgI~~i~~y~P~~~v~~~~l~~~~--g~---~~------~k~~~Gig~r~~av~~----~~ed~~~la~~Aa~~aL~ 70 (453)
.+.|.|.++|+..|--. +.+++.+.. |. .+ ..+...++-.--.+.. .......|+..|++++|+
T Consensus 10 ~~~VvITG~G~vs~~G~-~~~~~~~~L~~G~s~i~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~aa~~Al~ 88 (425)
T PRK06501 10 RPIVAVTGMGVVTSLGQ-GKADNWAALTAGESGIHTITRFPTEGLRTRIAGTVDFLPESPFGASALSEALARLAAEEALA 88 (425)
T ss_pred CcCEEEEeeeEECCCCC-CHHHHHHHHHcCCCceEcCCcccccCCCCceEEEEeecccccccccCHHHHHHHHHHHHHHH
Confidence 46799999999998655 555554442 22 11 1111101100000000 011235688999999999
Q ss_pred HcCCCcCCcC------------------EEEEEcccC---------------CC-------CCccHHHHHHHHhcccCCC
Q 012909 71 KYKIDPTQIG------------------RLEVGSETV---------------ID-------KSKSIKTFLMQIFEKYGNT 110 (453)
Q Consensus 71 ~agi~~~~Id------------------~li~~t~s~---------------~~-------~~~~~a~~l~~~Lgl~G~~ 110 (453)
++|+++.+++ .++.++... .. ..++.+..|+..+|+
T Consensus 89 dAgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~~gl---- 164 (425)
T PRK06501 89 QAGIGKGDFPGPLFLAAPPVELEWPARFALAAAVGDNDAPSYDRLLRAARGGRFDALHERFQFGSIADRLADRFGT---- 164 (425)
T ss_pred HcCCCccccccceeeccccccCCCCceEEEEEecCCccHHHHHHHHhhcCcccCChhhhhhcccHHHHHHHHHhCC----
Confidence 9998654322 122222111 11 234678889999998
Q ss_pred CeeEEeeCCcChhHHHHHHHHHHHHHhCCCCCCeEEEEEeec
Q 012909 111 DIEGVDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDT 152 (453)
Q Consensus 111 ~~~~~dv~~aC~gg~~AL~~A~~~v~sg~~~~~~aLVv~~d~ 152 (453)
+-+++++..+|+++..||..|.++|++|.. +.+||+++|.
T Consensus 165 ~G~~~~i~~aCaS~~~Al~~A~~~I~~G~~--d~vlvgG~d~ 204 (425)
T PRK06501 165 RGLPISLSTACASGATAIQLGVEAIRRGET--DRALCIATDG 204 (425)
T ss_pred CCCceeecCccHHHHHHHHHHHHHHHcCCC--CEEEEeeecc
Confidence 235688999999999999999999999977 9999999983
No 97
>PRK08142 acetyl-CoA acetyltransferase; Provisional
Probab=98.68 E-value=1e-07 Score=98.39 Aligned_cols=105 Identities=8% Similarity=-0.012 Sum_probs=85.7
Q ss_pred eeEcccceEEeccCCCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEEcccCCCCCccHHHHHHHHhcccCCCCeeEEeeC
Q 012909 39 YTVGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDST 118 (453)
Q Consensus 39 ~~~Gig~r~~av~~~~ed~~~la~~Aa~~aL~~agi~~~~Id~li~~t~s~~~~~~~~a~~l~~~Lgl~G~~~~~~~dv~ 118 (453)
+.+|+|+..+.. .++.+..+|+.+|++++|+++|++++|||.+++.+..+. .....+.+.||+ ...+...+.
T Consensus 8 aIvG~g~t~~~~-~~~~~~~~L~~eA~~~Al~DAgl~~~dID~~~~~~~~~~----~~~~~~~~~lGl---~~~~~~~v~ 79 (388)
T PRK08142 8 YIVGAYEHPTRK-APDKSVAQLHAEVAKGALADAGLSLADVDGYFCAGDAPG----LGPASMVDYLGL---KLRHVDSTE 79 (388)
T ss_pred EEEEEeecccee-CCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCCC----ccHHHHHHhCCC---CCeeecccc
Confidence 457889887754 356788999999999999999999999999875322211 112458899998 456778888
Q ss_pred CcChhHHHHHHHHHHHHHhCCCCCCeEEEEEeecc
Q 012909 119 NACYGGTAALFNCVNWVESASWDGRYGLVVCTDTA 153 (453)
Q Consensus 119 ~aC~gg~~AL~~A~~~v~sg~~~~~~aLVv~~d~~ 153 (453)
++|.++..++..|...|++|.+ +.||||+.|+.
T Consensus 80 ~gg~s~~~a~~~A~~~I~sG~~--d~vLvvg~e~~ 112 (388)
T PRK08142 80 TGGSSYLAHVGHAAQAIAAGKC--SVALITLAGRP 112 (388)
T ss_pred CCcHHHHHHHHHHHHHHHcCCC--CEEEEEeeeec
Confidence 9999999999999999999977 99999999975
No 98
>PRK09268 acetyl-CoA acetyltransferase; Provisional
Probab=98.67 E-value=1.5e-07 Score=98.36 Aligned_cols=96 Identities=14% Similarity=0.139 Sum_probs=79.2
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEEcccCCCCCccHHHHHHHHhcccCCCCeeEEeeCCcChhHHHHHHHHHH
Q 012909 54 VEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCVN 133 (453)
Q Consensus 54 ~ed~~~la~~Aa~~aL~~agi~~~~Id~li~~t~s~~~~~~~~a~~l~~~Lgl~G~~~~~~~dv~~aC~gg~~AL~~A~~ 133 (453)
+.+..+|+.+|++.+|+++|+++++||.+++|+..+.......+..+.-..|+ +...+++.|.++|++|+.|+..|..
T Consensus 28 ~~~~~eL~~~a~~~al~~agl~~~~Id~vv~G~~~~~~~~~~~~r~~~l~~gl--~~~~p~~~V~~~CaSG~~ai~~A~~ 105 (427)
T PRK09268 28 DASNQDMLTAALDGLVDRFGLQGERLGEVVAGAVLKHSRDFNLTRECVLGSAL--SPYTPAYDLQQACGTGLEAAILVAN 105 (427)
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccCCccccHHHHHHHHcCC--CCCCceeeeechhhHHHHHHHHHHH
Confidence 46789999999999999999999999999999765422123345554444455 4568899999999999999999999
Q ss_pred HHHhCCCCCCeEEEEEeecc
Q 012909 134 WVESASWDGRYGLVVCTDTA 153 (453)
Q Consensus 134 ~v~sg~~~~~~aLVv~~d~~ 153 (453)
.|++|.. +.+||+++|.+
T Consensus 106 ~I~sG~~--d~vlvgG~E~m 123 (427)
T PRK09268 106 KIALGQI--DSGIAGGVDTT 123 (427)
T ss_pred HHHCCCC--CEEEEeeEEcc
Confidence 9999976 89999999977
No 99
>PRK07801 acetyl-CoA acetyltransferase; Provisional
Probab=98.65 E-value=1.4e-07 Score=97.21 Aligned_cols=110 Identities=13% Similarity=0.095 Sum_probs=82.1
Q ss_pred eEcccceEEeccCC---CCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEEcccC-CCCCccHHHHHHHHhcccCCCCeeEE
Q 012909 40 TVGLGQDCMAFCSE---VEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETV-IDKSKSIKTFLMQIFEKYGNTDIEGV 115 (453)
Q Consensus 40 ~~Gig~r~~av~~~---~ed~~~la~~Aa~~aL~~agi~~~~Id~li~~t~s~-~~~~~~~a~~l~~~Lgl~G~~~~~~~ 115 (453)
.+|.+...+.--.. ..+..+|+.+|++++|+++|+++++||.|++++... .......+....-..|+ +..++++
T Consensus 6 Ivg~~~Tpf~~~~~~~~~~~~~~L~~~a~~~al~dagl~~~~ID~vv~g~~~~~~~~~~~~~~~~~l~~gl--~~~~p~~ 83 (382)
T PRK07801 6 IVDAVRTPVGKRKGGLAGVHPADLGAHVLKGLVDRTGIDPAAVDDVIFGCVDTIGPQAGNIARTSWLAAGL--PEEVPGV 83 (382)
T ss_pred EEecccCCccCCCCccCCCCHHHHHHHHHHHHHHHcCCCHHHcCEEEEEeeccCCcccccHHHHHHHHcCC--CCCCcee
Confidence 45666665532111 257899999999999999999999999999986421 11112233333334666 3457888
Q ss_pred eeCCcChhHHHHHHHHHHHHHhCCCCCCeEEEEEeecc
Q 012909 116 DSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDTA 153 (453)
Q Consensus 116 dv~~aC~gg~~AL~~A~~~v~sg~~~~~~aLVv~~d~~ 153 (453)
.+.++|++++.|+..|...|++|.. +.|||++.|.+
T Consensus 84 ~v~~acaSg~~Av~~Aa~~I~sG~~--d~vLv~G~e~m 119 (382)
T PRK07801 84 TVDRQCGSSQQAIHFAAQAVMSGTQ--DLVVAGGVQNM 119 (382)
T ss_pred eecchhhhHHHHHHHHHHHHHCCCC--CEEEEcchhhh
Confidence 9999999999999999999999987 99999999965
No 100
>TIGR02445 fadA fatty oxidation complex, beta subunit FadA. This subunit of the FadBA complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit. This protein is almost always located adjacent to FadB (TIGR02437). The FadBA complex is the major complex active for beta-oxidation of fatty acids in E. coli.
Probab=98.59 E-value=1.4e-07 Score=97.33 Aligned_cols=96 Identities=15% Similarity=0.140 Sum_probs=79.8
Q ss_pred CCCHHHHHHHHHHHHHHH-cCCCcCCcCEEEEEcccCCCC-CccHHHHHHHHhcccCCCCeeEEeeCCcChhHHHHHHHH
Q 012909 54 VEDVISMSLTVVTSLLEK-YKIDPTQIGRLEVGSETVIDK-SKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNC 131 (453)
Q Consensus 54 ~ed~~~la~~Aa~~aL~~-agi~~~~Id~li~~t~s~~~~-~~~~a~~l~~~Lgl~G~~~~~~~dv~~aC~gg~~AL~~A 131 (453)
+.++.+|+.+|++.+|++ +|++|++||.+++|+...... ...++..+....|+ +..++++.|+++|++|..|+..|
T Consensus 22 ~~~~~~L~~~a~~~al~~~agl~~~~Id~v~~G~~~~~~~~g~~~ar~~~~~~g~--~~~~p~~tV~~~CaSG~~Ai~~A 99 (385)
T TIGR02445 22 NTRAEDLSAHLMSKLLARNPKVDPAEVEDIYWGCVQQTLEQGFNIARNAALLAQI--PHTSAAVTVNRLCGSSMQALHDA 99 (385)
T ss_pred CCCHHHHHHHHHHHHHHhccCCCHHHcCEEEEecccccccccchHHHHHHHHCCC--CCCcchhhhhhhhHHHHHHHHHH
Confidence 567889999999999997 599999999999997643211 23355555556676 56689999999999999999999
Q ss_pred HHHHHhCCCCCCeEEEEEeecc
Q 012909 132 VNWVESASWDGRYGLVVCTDTA 153 (453)
Q Consensus 132 ~~~v~sg~~~~~~aLVv~~d~~ 153 (453)
...|++|.. +.+||++.|.+
T Consensus 100 a~~I~sG~~--d~vlagG~E~m 119 (385)
T TIGR02445 100 ARAIMTGDA--DVCLVGGVEHM 119 (385)
T ss_pred HHHHHCCCC--CEEEEeeehhc
Confidence 999999976 89999999977
No 101
>PRK07314 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=98.58 E-value=2.7e-06 Score=88.42 Aligned_cols=90 Identities=11% Similarity=0.073 Sum_probs=70.9
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcC----EEEEEcccCC---------------------C-----CCccHHHHHHHHhcc
Q 012909 57 VISMSLTVVTSLLEKYKIDPTQIG----RLEVGSETVI---------------------D-----KSKSIKTFLMQIFEK 106 (453)
Q Consensus 57 ~~~la~~Aa~~aL~~agi~~~~Id----~li~~t~s~~---------------------~-----~~~~~a~~l~~~Lgl 106 (453)
...|++.|++++|+++|++++++| .+++++..+. . .....+.++...||+
T Consensus 72 ~~~l~~~aa~~Al~dAGl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl 151 (411)
T PRK07314 72 FIQYGIAAAKQAVEDAGLEITEENADRIGVIIGSGIGGLETIEEQHITLLEKGPRRVSPFFVPMAIINMAAGHVSIRYGA 151 (411)
T ss_pred HHHHHHHHHHHHHHHcCCCcccCCcccEEEEEecCcCChHHHHHHHHHHHhcCccccChhhhhhhcchHHHHHHHHHhCC
Confidence 357899999999999999998888 5777764321 0 011255678888898
Q ss_pred cCCCCeeEEeeCCcChhHHHHHHHHHHHHHhCCCCCCeEEEEEeec
Q 012909 107 YGNTDIEGVDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDT 152 (453)
Q Consensus 107 ~G~~~~~~~dv~~aC~gg~~AL~~A~~~v~sg~~~~~~aLVv~~d~ 152 (453)
.| +.+-+..+|++++.||..|..+|++|.. +.|||.++|.
T Consensus 152 ~G----p~~tv~~acaSgl~Al~~A~~~I~~G~~--d~vlvgg~~~ 191 (411)
T PRK07314 152 KG----PNHSIVTACATGAHAIGDAARLIAYGDA--DVMVAGGAEA 191 (411)
T ss_pred CC----ccccchhhhHHHHHHHHHHHHHHhcCCC--CEEEEeeecc
Confidence 33 4556678999999999999999999977 8999999986
No 102
>PRK07855 lipid-transfer protein; Provisional
Probab=98.56 E-value=4.1e-07 Score=93.89 Aligned_cols=102 Identities=9% Similarity=0.001 Sum_probs=81.6
Q ss_pred eeEcccceEEeccCCCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEEcccCCCCCccHHHHHHHHhcccCCCCeeEEeeC
Q 012909 39 YTVGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDST 118 (453)
Q Consensus 39 ~~~Gig~r~~av~~~~ed~~~la~~Aa~~aL~~agi~~~~Id~li~~t~s~~~~~~~~a~~l~~~Lgl~G~~~~~~~dv~ 118 (453)
+.+|+|+..+.. .++.+..+|+.+|++++|+++|++++|||.+++.+.. ..+ ...+.+.||+ ....+...+.
T Consensus 7 ~IvG~g~t~~~r-~~~~~~~~L~~eA~~~Al~DAgl~~~dID~~~~~~~~---~~~--~~~l~~~lGl--~~~~~~~~v~ 78 (386)
T PRK07855 7 AIVGIGATEFSK-NSGRSELRLACEAVLAALDDAGLAPSDVDGLVTFTMD---TNP--EIAVARALGI--GELKFFSRIH 78 (386)
T ss_pred EEEEeeeccccc-CCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEecCc---ccc--HHHHHHHCCC--CCCcceeeec
Confidence 456888876643 3466889999999999999999999999999874432 122 2568899998 3324556788
Q ss_pred CcChhHHHHHHHHHHHHHhCCCCCCeEEEEEe
Q 012909 119 NACYGGTAALFNCVNWVESASWDGRYGLVVCT 150 (453)
Q Consensus 119 ~aC~gg~~AL~~A~~~v~sg~~~~~~aLVv~~ 150 (453)
++|.++..+|..|...|++|.+ +.|||+++
T Consensus 79 ~gg~sg~~~~~~A~~~I~sG~~--d~vLv~g~ 108 (386)
T PRK07855 79 YGGGAACATVQQAAMAVATGVA--DVVVCYRA 108 (386)
T ss_pred CCcHHHHHHHHHHHHHHHCCCC--CEEEEEee
Confidence 9999999999999999999977 99999876
No 103
>PRK08257 acetyl-CoA acetyltransferase; Validated
Probab=98.53 E-value=6.4e-07 Score=95.31 Aligned_cols=108 Identities=11% Similarity=0.038 Sum_probs=85.7
Q ss_pred eEcccceEEeccCCC--CCHHHHHHHHHHHHHHHcCCC--cCCcCEEEEEcccCCCCCccHHHHHHHHhcccCCCCeeEE
Q 012909 40 TVGLGQDCMAFCSEV--EDVISMSLTVVTSLLEKYKID--PTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGV 115 (453)
Q Consensus 40 ~~Gig~r~~av~~~~--ed~~~la~~Aa~~aL~~agi~--~~~Id~li~~t~s~~~~~~~~a~~l~~~Lgl~G~~~~~~~ 115 (453)
.+|+|+..+....++ .+..+|+.+|++++|+++|++ +++||.+++++..... .......+.+.||+ ......
T Consensus 8 IVGvG~t~~~~~~~~~~~s~~~L~~eA~~~Al~DAGl~~~~~dID~v~v~~~~~~~-~~~~~~~la~~lGl---~p~~~~ 83 (498)
T PRK08257 8 IVGVGQVTERPDDPAYGLEPVDLMAAAARAAAADAGADAVLEAIDSVAVVNQLSWR-YRDPPGLLAERLGA---DPARTV 83 (498)
T ss_pred EEEeeecccccCCcccCCCHHHHHHHHHHHHHHhcCCCcCHHHCCEEEEecccccc-ccCHHHHHHHHcCC---CCccee
Confidence 569998776431223 278999999999999999999 9999999987653221 22345788999998 334455
Q ss_pred eeCCcChhHHHHHHHHHHHHHhCCCCCCeEEEEEeecc
Q 012909 116 DSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDTA 153 (453)
Q Consensus 116 dv~~aC~gg~~AL~~A~~~v~sg~~~~~~aLVv~~d~~ 153 (453)
....+|.++..++..|+..|++|.. +.|||+++|.+
T Consensus 84 ~~~~GG~s~~~~v~~Aa~~IasG~a--dvVLv~G~E~~ 119 (498)
T PRK08257 84 YSPVGGNSPQRLVNEAALRIAAGEA--DVALVAGAEAQ 119 (498)
T ss_pred EecCCCHHHHHHHHHHHHHHHCCCC--CEEEEeeeeec
Confidence 5678899999999999999999977 99999999986
No 104
>PRK06333 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=98.53 E-value=7e-06 Score=85.77 Aligned_cols=89 Identities=13% Similarity=0.079 Sum_probs=69.0
Q ss_pred HHHHHHHHHHHHHHcCCCcCCc-C----EEEEEcccCCC---------------------CC-----ccHHHHHHHHhcc
Q 012909 58 ISMSLTVVTSLLEKYKIDPTQI-G----RLEVGSETVID---------------------KS-----KSIKTFLMQIFEK 106 (453)
Q Consensus 58 ~~la~~Aa~~aL~~agi~~~~I-d----~li~~t~s~~~---------------------~~-----~~~a~~l~~~Lgl 106 (453)
..|++.|++++|+++|++++++ + .+++++..+.. .. -..+.+|...+|+
T Consensus 83 ~~l~~~aa~~Al~dAgl~~~~~~~~~~~Gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl 162 (424)
T PRK06333 83 ILFAMAAAKEALAQAGWDPDTLEDRERTATIIGSGVGGFPAIAEAVRTLDSRGPRRLSPFTIPSFLTNMAAGHVSIRYGF 162 (424)
T ss_pred HHHHHHHHHHHHHhcCCCccccCCcccEEEEEecCcccHHHHHHHHHHHHhcCCcccChhHHhhhhhhHHHHHHHHHhCC
Confidence 4689999999999999987766 2 56677653321 00 1235678888888
Q ss_pred cCCCCeeEEeeCCcChhHHHHHHHHHHHHHhCCCCCCeEEEEEeec
Q 012909 107 YGNTDIEGVDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDT 152 (453)
Q Consensus 107 ~G~~~~~~~dv~~aC~gg~~AL~~A~~~v~sg~~~~~~aLVv~~d~ 152 (453)
. -+.+.+..+|++++.||..|..+|++|.. +.+||+++|.
T Consensus 163 ~----Gp~~~v~~aCaSg~~Al~~A~~~I~~G~~--d~alvgG~e~ 202 (424)
T PRK06333 163 K----GPLGAPVTACAAGVQAIGDAARLIRSGEA--DVAVCGGTEA 202 (424)
T ss_pred C----CCCccccchhHHHHHHHHHHHHHHHcCCC--CEEEEeeecc
Confidence 3 34566789999999999999999999977 8999999997
No 105
>PRK06066 acetyl-CoA acetyltransferase; Provisional
Probab=98.52 E-value=6.4e-07 Score=92.23 Aligned_cols=107 Identities=12% Similarity=0.059 Sum_probs=80.0
Q ss_pred eeEcccceEEeccCCCCCHHHHHHHHHHHHHHHcC-CCc-CCcCEEEEEcccCCCCCccHHHHHHHHhcccCCCCeeEEe
Q 012909 39 YTVGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYK-IDP-TQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVD 116 (453)
Q Consensus 39 ~~~Gig~r~~av~~~~ed~~~la~~Aa~~aL~~ag-i~~-~~Id~li~~t~s~~~~~~~~a~~l~~~Lgl~G~~~~~~~d 116 (453)
+.+|+|+..+....++.+..+|+.+|++++|+++| +++ +|||.+++++.............+.+.||+. ..+.+.
T Consensus 7 aIvG~g~t~~~~~~~~~s~~eL~~eA~~~Al~DAG~l~~~~dId~~~~~~~~~~~~~~~~~~~~~~~lg~~---~~~~~~ 83 (385)
T PRK06066 7 AIVGIGWYGFRPTTPEVSFREMMFEAASRAYKDAGNINPRRDVDSFISCQEDFWEGIAIADEFAPDQIGGA---MRPTMT 83 (385)
T ss_pred EEEEeeecCCcCCCCCCCHHHHHHHHHHHHHHhcCCCCChhcCCEEEEecCcccCcccccchhHHHHcccC---CCCeEE
Confidence 35788888765223478899999999999999999 997 7999998864211111112223466888872 233444
Q ss_pred eCCcChhHHHHHHHHHHHHHhCCCCCCeEEEEEeecc
Q 012909 117 STNACYGGTAALFNCVNWVESASWDGRYGLVVCTDTA 153 (453)
Q Consensus 117 v~~aC~gg~~AL~~A~~~v~sg~~~~~~aLVv~~d~~ 153 (453)
+ |.++..++..|...|++|.+ ++|||++.|++
T Consensus 84 v---~~sg~~a~~~A~~aV~sG~~--d~vLv~g~~~~ 115 (385)
T PRK06066 84 V---AGDGLQGLAHAVMHINSGLA--NVVVVEAHSKP 115 (385)
T ss_pred E---eCcHHHHHHHHHHHHHcCCC--CEEEEEEEeec
Confidence 4 88999999999999999987 99999999875
No 106
>PF08545 ACP_syn_III: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; InterPro: IPR013751 Fatty acid synthesis (FAS) is a vital aspect of cellular physiology which can occur by two distinct pathways. The FAS I pathway, which generally only produces palmitate, is found in eukaryotes and is performed either by a single polypeptide which contains all the reaction centres needed to form a fatty acid, or by two polypeptides which interact to form a multifunctional complex. The FAS II pathway, which is capable of producing many different fatty acids, is found in mitochondria, bacteria, plants and parasites, and is performed by many distinct proteins, each of which catalyses a single step within the pathway. The large diversity of products generated by this pathway is possible because the acyl carrier protein (ACP) intermediates are diffusible entities that can be diverted into other biosynthetic pathways []. 3-Oxoacyl-[acyl carrier protein (ACP)] synthase III catalyses the first condensation step within the FAS II pathway, using acetyl-CoA as the primer and malonyl-ACP as the acceptor, as shown below. Acyl-[ACP] + malonyl-[ACP] = 3-oxoacyl-[ACP] + CO(2) + [ACP] The oxoacyl-ACP formed by this reaction subsequently enters the elongation cycle, where the acyl chain is progressively lengthened by the combined activities of several enzymes. The enzymes studied so far are homodimers, where each monomer consists of two domains (N-terminal and C-terminal) which are similar in structure, but not in sequence [, ]. This entry represents a conserved region within the N-terminal domain.; GO: 0004315 3-oxoacyl-[acyl-carrier-protein] synthase activity, 0006633 fatty acid biosynthetic process; PDB: 1ZOW_C 1UB7_B 3IL7_A 3IL3_A 2X3E_B 4DFE_C 3LED_B 3ROW_B 3S23_A 3S1Z_A ....
Probab=98.51 E-value=1.6e-07 Score=74.87 Aligned_cols=47 Identities=30% Similarity=0.308 Sum_probs=42.1
Q ss_pred EeeCCcChhHHHHHHHHHHHHHhCCCCCCeEEEEEeecc------------------ceeeeecCCC
Q 012909 115 VDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDTA------------------AVAMLIGPDA 163 (453)
Q Consensus 115 ~dv~~aC~gg~~AL~~A~~~v~sg~~~~~~aLVv~~d~~------------------AvA~Ll~~~~ 163 (453)
||++++|+|++.||++|..+|++|.. ++||||++|.. |+|+||++++
T Consensus 1 fDi~~~C~g~~~al~~A~~~i~~g~~--~~~Lvv~~d~~s~~~~~~~~~~~~~~gDgAaA~vl~~~~ 65 (80)
T PF08545_consen 1 FDINQACAGFLYALDVAAALIASGRA--KNALVVGGDRLSRIVDRTDRQTAFIFGDGAAAVVLSRDE 65 (80)
T ss_dssp EEEE-GGGHHHHHHHHHHHHHHTTS---SEEEEEEEEEGGGGSHTTHHHHHTTB-EEEEEEEEEEES
T ss_pred CcccccchHHHHHHHHHHHHHhhccC--CEEEEEeeccccccccccccCcceeecchheEEEEEecC
Confidence 79999999999999999999999955 99999999996 9999999863
No 107
>PRK05952 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=98.51 E-value=1.3e-05 Score=82.51 Aligned_cols=135 Identities=16% Similarity=0.152 Sum_probs=86.4
Q ss_pred ceeEEeEEEEEcCCceechhHHhhhh--CCC---c-Ceee--EcccceEEeccCCCCCHHHHHHHHHHHHHHHcCCCc--
Q 012909 7 KNVGILALDIYFPPTCVLQEALEVHD--GVS---K-GKYT--VGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDP-- 76 (453)
Q Consensus 7 ~~vgI~~i~~y~P~~~v~~~~l~~~~--g~~---~-~k~~--~Gig~r~~av~~~~ed~~~la~~Aa~~aL~~agi~~-- 76 (453)
+.|-|.++|+..|--. .+++.+.. |.+ + ..|. ...-..... ........++..|++++|+++|+++
T Consensus 2 ~rVvITG~G~vsp~G~--~~~~~~~l~~G~sgi~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~a~~~Al~dagl~~~~ 77 (381)
T PRK05952 2 MKVVVTGIGLVSALGD--LEQSWQRLLQGKSGIKLHQPFPELPPLPLGLIG--NQPSSLEDLTKTVVTAALKDAGLTPPL 77 (381)
T ss_pred CeEEEEeeEEECcccC--HHHHHHHHHcCCCCeEeCCcccccccccceeec--cccccccHHHHHHHHHHHHhcCCCCCC
Confidence 4699999999999876 55544432 221 1 0110 000000000 0011233467789999999999864
Q ss_pred CCcCEEEEEcccCC--------------------CCC---------ccHHHHHHHHhcccCCCCeeEEeeCCcChhHHHH
Q 012909 77 TQIGRLEVGSETVI--------------------DKS---------KSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAA 127 (453)
Q Consensus 77 ~~Id~li~~t~s~~--------------------~~~---------~~~a~~l~~~Lgl~G~~~~~~~dv~~aC~gg~~A 127 (453)
++++ |++||..+. +.. -..+.++...+|+.| +.+.+..+|++++.|
T Consensus 78 ~~~G-v~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~~~~~G----p~~ti~~aCasg~~A 152 (381)
T PRK05952 78 TDCG-VVIGSSRGCQGQWEKLARQMYQGDDSPDEELDLENWLDTLPHQAAIAAARQIGTQG----PVLAPMAACATGLWA 152 (381)
T ss_pred CCEE-EEEeeCcchHHHHHHHHHHHhhcCCccccccCHHHHHHhcccHHHHHHHHHhCCCC----ccccccchhHHHHHH
Confidence 4454 556664321 000 124567888888833 466788999999999
Q ss_pred HHHHHHHHHhCCCCCCeEEEEEeec
Q 012909 128 LFNCVNWVESASWDGRYGLVVCTDT 152 (453)
Q Consensus 128 L~~A~~~v~sg~~~~~~aLVv~~d~ 152 (453)
|..|.++|++|.. +.+||.++|.
T Consensus 153 i~~A~~~i~~G~~--d~~lvgg~d~ 175 (381)
T PRK05952 153 IAQGVELIQTGQC--QRVIAGAVEA 175 (381)
T ss_pred HHHHHHHHHcCCC--CEEEEccccc
Confidence 9999999999976 8999999986
No 108
>PRK07103 polyketide beta-ketoacyl:acyl carrier protein synthase; Validated
Probab=98.44 E-value=1.4e-05 Score=83.17 Aligned_cols=90 Identities=19% Similarity=0.179 Sum_probs=66.8
Q ss_pred HHHHHHHHHHHHHHHcCCC---cCCcCEEEEEccc---------------CCCCCc---------cHHHHHHHHhcccCC
Q 012909 57 VISMSLTVVTSLLEKYKID---PTQIGRLEVGSET---------------VIDKSK---------SIKTFLMQIFEKYGN 109 (453)
Q Consensus 57 ~~~la~~Aa~~aL~~agi~---~~~Id~li~~t~s---------------~~~~~~---------~~a~~l~~~Lgl~G~ 109 (453)
...|++.|++++|+++|++ +++|+.++.++.. +....| ..+.+|...||+.|
T Consensus 80 ~~~lal~Aa~eAl~dAgl~~~~~~riGvivG~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl~G- 158 (410)
T PRK07103 80 SAQAALAAAREAWRDAALGPVDPDRIGLVVGGSNLQQREQALVHETYRDRPAFLRPSYGLSFMDTDLVGLCSEQFGIRG- 158 (410)
T ss_pred HHHHHHHHHHHHHHhcCcCCCCCCCEEEEEccCCcchHHHHHHHHHhccCccccChhhhhhhcchHHHHHHHHHhCCCC-
Confidence 4579999999999999986 4566655533221 111111 24567788999832
Q ss_pred CCeeEEeeCCcChhHHHHHHHHHHHHHhCCCCCCeEEEEEeec
Q 012909 110 TDIEGVDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDT 152 (453)
Q Consensus 110 ~~~~~~dv~~aC~gg~~AL~~A~~~v~sg~~~~~~aLVv~~d~ 152 (453)
+.+.+..+|++++.||..|..+|++|.. +.+||+++|.
T Consensus 159 ---~~~tv~~acas~~~Al~~A~~~I~~G~~--d~~lv~g~~~ 196 (410)
T PRK07103 159 ---EGFTVGGASASGQLAVIQAARLVQSGSV--DACIAVGALM 196 (410)
T ss_pred ---CcccccchhHHHHHHHHHHHHHHHcCCC--CEEEEecccc
Confidence 4566899999999999999999999976 8999998863
No 109
>PTZ00050 3-oxoacyl-acyl carrier protein synthase; Provisional
Probab=98.44 E-value=1.3e-05 Score=83.70 Aligned_cols=90 Identities=12% Similarity=0.186 Sum_probs=67.2
Q ss_pred HHHHHHHHHHHHHHHcCCC-cCCcCE----EEEEcccCCCC--------------------------CccHHHHHHHHhc
Q 012909 57 VISMSLTVVTSLLEKYKID-PTQIGR----LEVGSETVIDK--------------------------SKSIKTFLMQIFE 105 (453)
Q Consensus 57 ~~~la~~Aa~~aL~~agi~-~~~Id~----li~~t~s~~~~--------------------------~~~~a~~l~~~Lg 105 (453)
...|++.|++++|+++|++ +++++. +++++..+... .-..+.+|...+|
T Consensus 77 ~~~l~~~aa~~Al~dAGl~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~~ 156 (421)
T PTZ00050 77 ATHFAMAAAREALADAKLDILSEKDQERIGVNIGSGIGSLADLTDEMKTLYEKGHSRVSPYFIPKILGNMAAGLVAIKHK 156 (421)
T ss_pred HHHHHHHHHHHHHHHcCCCcccccCcccEEEEEccCcccHHHHHHHHHHHHhcCcCcCCHHHHHhhhhhHHHHHHHHHhC
Confidence 4789999999999999998 666553 44555432110 0123456677777
Q ss_pred ccCCCCeeEEeeCCcChhHHHHHHHHHHHHHhCCCCCCeEEEEEeec
Q 012909 106 KYGNTDIEGVDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDT 152 (453)
Q Consensus 106 l~G~~~~~~~dv~~aC~gg~~AL~~A~~~v~sg~~~~~~aLVv~~d~ 152 (453)
+.| +.+.+..+|++++.||..|..+|++|.. +.+||.++|.
T Consensus 157 l~G----p~~ti~~aCaSg~~Al~~A~~~I~~G~~--d~~lvgG~e~ 197 (421)
T PTZ00050 157 LKG----PSGSAVTACATGAHCIGEAFRWIKYGEA--DIMICGGTEA 197 (421)
T ss_pred CCC----cccccccHhHHHHHHHHHHHHHHHcCCC--CEEEECcccc
Confidence 732 4567789999999999999999999977 8999999885
No 110
>PRK06025 acetyl-CoA acetyltransferase; Provisional
Probab=98.42 E-value=1.5e-06 Score=90.06 Aligned_cols=97 Identities=12% Similarity=0.101 Sum_probs=86.7
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEEcccCCCC-CccHHHHHHHHhcccCCCCeeEEeeCCcChhHHHHHHHH
Q 012909 53 EVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDK-SKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNC 131 (453)
Q Consensus 53 ~~ed~~~la~~Aa~~aL~~agi~~~~Id~li~~t~s~~~~-~~~~a~~l~~~Lgl~G~~~~~~~dv~~aC~gg~~AL~~A 131 (453)
.+-++.+|+..+.+.+|++++++|++||.||+|...+... ...++....-..|| +..++++.|+..|.||+.|+..|
T Consensus 25 ~~~~~~~L~~~~~~~~l~r~~i~~~~id~vi~G~~~~~g~~g~n~aR~~al~agl--p~~vp~~tvnr~C~Sgl~ai~~a 102 (417)
T PRK06025 25 AHLHPQHLAATVLKALAERNGLNTADVDDIIWSTSSQRGKQGGDLGRMAALDAGY--DIKASGVTLDRFCGGGITSVNLA 102 (417)
T ss_pred CCCCHHHHHHHHHHHHHHhcCCCHHHCCEEEEEcCCCcCcccCcHHHHHHHhCCC--CCCCCeeeeccccchHHHHHHHH
Confidence 3568899999999999999999999999999998755432 35688888888898 78899999999999999999999
Q ss_pred HHHHHhCCCCCCeEEEEEeecc
Q 012909 132 VNWVESASWDGRYGLVVCTDTA 153 (453)
Q Consensus 132 ~~~v~sg~~~~~~aLVv~~d~~ 153 (453)
...|++|.. +.+|+.+.|.+
T Consensus 103 a~~I~~G~~--~~~laGG~Esm 122 (417)
T PRK06025 103 AAQIMSGME--DLVIAGGTEMM 122 (417)
T ss_pred HHHHHcCCC--CEEEEeeeecc
Confidence 999999965 89999999988
No 111
>PLN02836 3-oxoacyl-[acyl-carrier-protein] synthase
Probab=98.38 E-value=7.9e-06 Score=85.81 Aligned_cols=90 Identities=11% Similarity=0.071 Sum_probs=68.5
Q ss_pred HHHHHHHHHHHHHHHcCCCcC-----CcCEEEEEcccCCC-----------------CC---------ccHHHHHHHHhc
Q 012909 57 VISMSLTVVTSLLEKYKIDPT-----QIGRLEVGSETVID-----------------KS---------KSIKTFLMQIFE 105 (453)
Q Consensus 57 ~~~la~~Aa~~aL~~agi~~~-----~Id~li~~t~s~~~-----------------~~---------~~~a~~l~~~Lg 105 (453)
...|++.|+.++|+++|+++. +...|++||..+.. .. -..+.+|...+|
T Consensus 93 ~~~~~~~aa~~Al~dAg~~~~~~~~~~~~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n~~a~~is~~~g 172 (437)
T PLN02836 93 FIGYALCAADEALSDARWLPSEDEAKERTGVSIGGGIGSITDILEAAQLICEKRLRRLSPFFVPRILINMAAGHVSIRYG 172 (437)
T ss_pred HHHHHHHHHHHHHHHcCCCcccccCCcCEEEEEeeccCcHHHHHHHHHHHHhcCCCCCChhhhhhhcccHHHHHHHHHhC
Confidence 357899999999999998542 45667788743221 00 124567888888
Q ss_pred ccCCCCeeEEeeCCcChhHHHHHHHHHHHHHhCCCCCCeEEEEEeec
Q 012909 106 KYGNTDIEGVDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDT 152 (453)
Q Consensus 106 l~G~~~~~~~dv~~aC~gg~~AL~~A~~~v~sg~~~~~~aLVv~~d~ 152 (453)
+. -+.+.+.++|++++.||..|..+|++|.. +.+||.++|.
T Consensus 173 l~----Gp~~tv~~acaSg~~Al~~A~~~I~~G~~--d~~lvgg~~~ 213 (437)
T PLN02836 173 FQ----GPNHAAVTACATGAHSIGDAFRMIQFGDA--DVMVAGGTES 213 (437)
T ss_pred CC----CceeceeChhHHHHHHHHHHHHHHHcCCC--CEEEEccccc
Confidence 72 35677889999999999999999999977 8999988875
No 112
>PRK08722 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=98.36 E-value=1e-05 Score=84.45 Aligned_cols=140 Identities=13% Similarity=0.099 Sum_probs=90.5
Q ss_pred ceeEEeEEEEEcCCceechhHHhhhh--CC---Cc-Ceee-EcccceEEeccC---------C----CCC-HHHHHHHHH
Q 012909 7 KNVGILALDIYFPPTCVLQEALEVHD--GV---SK-GKYT-VGLGQDCMAFCS---------E----VED-VISMSLTVV 65 (453)
Q Consensus 7 ~~vgI~~i~~y~P~~~v~~~~l~~~~--g~---~~-~k~~-~Gig~r~~av~~---------~----~ed-~~~la~~Aa 65 (453)
..|-|.++++.+|--. +.+++.+.. |. .+ .++. ..+..+.-...+ . ..| ...++..|+
T Consensus 4 ~~VvItG~g~~~p~g~-~~~~~w~~L~~g~s~i~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~d~~~~~~l~a~ 82 (414)
T PRK08722 4 RRVVVTGMGMLSPVGN-TVESSWKALLAGQSGIVNIEHFDTTNFSTRFAGLVKDFNCEEYMSKKDARKMDLFIQYGIAAG 82 (414)
T ss_pred CCEEEEeeEEECCCCC-CHHHHHHHHHhCCCeeeecCccccccCCCceeEEcCCCChhHcCCHHHHhhcCHHHHHHHHHH
Confidence 5799999999999773 666655542 21 11 1110 001000000000 0 011 235788999
Q ss_pred HHHHHHcCCCcCCcC----EEEEEcccCCC-----------------CC---------ccHHHHHHHHhcccCCCCeeEE
Q 012909 66 TSLLEKYKIDPTQIG----RLEVGSETVID-----------------KS---------KSIKTFLMQIFEKYGNTDIEGV 115 (453)
Q Consensus 66 ~~aL~~agi~~~~Id----~li~~t~s~~~-----------------~~---------~~~a~~l~~~Lgl~G~~~~~~~ 115 (453)
+++|+++|+++.+.+ .|++||..+.. .. -.++.+|...+|+.| +.+
T Consensus 83 ~~Al~dAGl~~~~~~~~r~Gv~vGt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~gl~G----p~~ 158 (414)
T PRK08722 83 IQALDDSGLEVTEENAHRIGVAIGSGIGGLGLIEAGHQALVEKGPRKVSPFFVPSTIVNMIAGNLSIMRGLRG----PNI 158 (414)
T ss_pred HHHHHHcCCCccccCCCCEEEEEeeCCCcchhHHHHHHHHHhcCcccCCchhcccccccHHHHHHHHHhCCCC----Ccc
Confidence 999999999764433 36666643211 00 136678888888833 466
Q ss_pred eeCCcChhHHHHHHHHHHHHHhCCCCCCeEEEEEeecc
Q 012909 116 DSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDTA 153 (453)
Q Consensus 116 dv~~aC~gg~~AL~~A~~~v~sg~~~~~~aLVv~~d~~ 153 (453)
.+..+|++++.||..|.++|++|.. +.+||.++|..
T Consensus 159 ti~~aCas~~~Al~~A~~~i~~G~~--d~~lvgg~d~~ 194 (414)
T PRK08722 159 AISTACTTGLHNIGHAARMIAYGDA--DAMVAGGAEKA 194 (414)
T ss_pred ccccccHHHHHHHHHHHHHHHcCCC--CEEEEeccccc
Confidence 7789999999999999999999977 99999999874
No 113
>KOG1406 consensus Peroxisomal 3-ketoacyl-CoA-thiolase P-44/SCP2 [Lipid transport and metabolism]
Probab=98.36 E-value=8e-07 Score=84.40 Aligned_cols=110 Identities=19% Similarity=0.148 Sum_probs=90.1
Q ss_pred cCeeeEcccceEEeccC--CCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEEcccCCCCCccHHHHHHHHhcccCCCCee
Q 012909 36 KGKYTVGLGQDCMAFCS--EVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIE 113 (453)
Q Consensus 36 ~~k~~~Gig~r~~av~~--~~ed~~~la~~Aa~~aL~~agi~~~~Id~li~~t~s~~~~~~~~a~~l~~~Lgl~G~~~~~ 113 (453)
|..|..|+|+.++--|. ++-|-.+|+.+|...+|+++++..++|+.-++|-..++...- .+..-.+|+ +.++
T Consensus 6 ~rvyvvgvgmtkf~kpg~~~~~dypd~a~ea~tkal~da~ikys~vqqa~vgyvfgdstcg---qraiyevgm---tgip 79 (408)
T KOG1406|consen 6 PRVYVVGVGMTKFEKPGRVADWDYPDFAKEAITKALQDAGIKYSEVQQAVVGYVFGDSTCG---QRAIYEVGM---TGIP 79 (408)
T ss_pred ceEEEEecceeeecCCCcccCCCCchHHHHHHHHHHHhcCCCHHHHHhhhheeeecCCccc---hHHHHhccc---cCcc
Confidence 45577899998874332 355778999999999999999999999988877666654322 233347787 8899
Q ss_pred EEeeCCcChhHHHHHHHHHHHHHhCCCCCCeEEEEEeecc
Q 012909 114 GVDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDTA 153 (453)
Q Consensus 114 ~~dv~~aC~gg~~AL~~A~~~v~sg~~~~~~aLVv~~d~~ 153 (453)
.+.++|+|++|..||.+|.+.|++|.. +.||..+.|++
T Consensus 80 i~nvnnncatgssalflakqiiesgn~--dcvlalgfekm 117 (408)
T KOG1406|consen 80 IYNVNNNCATGSSALFLAKQIIESGNS--DCVLALGFEKM 117 (408)
T ss_pred eeeccCccccCchHHHHHHHHHhcCCc--ceEEeechhhh
Confidence 999999999999999999999999966 89999999998
No 114
>cd00832 CLF Chain-length factor (CLF) is a factor required for polyketide chain initiation of aromatic antibiotic-producing polyketide synthases (PKSs) of filamentous bacteria. CLFs have been shown to have decarboxylase activity towards malonyl-acyl carrier protein (ACP). CLFs are similar to other elongation ketosynthase domains, but their active site cysteine is replaced by a conserved glutamine.
Probab=98.35 E-value=1.3e-05 Score=83.09 Aligned_cols=89 Identities=16% Similarity=0.040 Sum_probs=67.1
Q ss_pred HHHHHHHHHHHHHHcCCCcCCcC----EEEEEcccCCC-----------------CC---------ccHHHHHHHHhccc
Q 012909 58 ISMSLTVVTSLLEKYKIDPTQIG----RLEVGSETVID-----------------KS---------KSIKTFLMQIFEKY 107 (453)
Q Consensus 58 ~~la~~Aa~~aL~~agi~~~~Id----~li~~t~s~~~-----------------~~---------~~~a~~l~~~Lgl~ 107 (453)
.-|++.|++++|+++|+++++++ .|++||..+.. .. -..+.+|...+|+.
T Consensus 72 ~~~~l~aa~eAl~dAGl~~~~~~~~r~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl~ 151 (399)
T cd00832 72 TRLALAAADWALADAGVDPAALPPYDMGVVTASAAGGFEFGQRELQKLWSKGPRHVSAYQSFAWFYAVNTGQISIRHGMR 151 (399)
T ss_pred HHHHHHHHHHHHHHcCCCccccCCCceEEEEccCCccHHHHHHHHHHHHhcCccccChhhhhhhhhhHHHHHHHHHhCCC
Confidence 56889999999999999876543 36667654311 00 12456788888883
Q ss_pred CCCCeeEEeeCCcChhHHHHHHHHHHHHHhCCCCCCeEEEEEeecc
Q 012909 108 GNTDIEGVDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDTA 153 (453)
Q Consensus 108 G~~~~~~~dv~~aC~gg~~AL~~A~~~v~sg~~~~~~aLVv~~d~~ 153 (453)
| +++-+..+|++++.||..|..+|++| . +.+||.++|..
T Consensus 152 G----p~~ti~~acaS~~~Al~~A~~~i~~G--~-d~~i~gg~d~~ 190 (399)
T cd00832 152 G----PSGVVVAEQAGGLDALAQARRLVRRG--T-PLVVSGGVDSA 190 (399)
T ss_pred C----CcccccchhHHHHHHHHHHHHHHHcC--C-CeEEEEeeccc
Confidence 3 35567899999999999999999999 5 79999999873
No 115
>PRK08439 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=98.34 E-value=3.9e-05 Score=79.86 Aligned_cols=90 Identities=18% Similarity=0.188 Sum_probs=69.9
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcC----EEEEEcccCCC--------------------------CCccHHHHHHHHhcc
Q 012909 57 VISMSLTVVTSLLEKYKIDPTQIG----RLEVGSETVID--------------------------KSKSIKTFLMQIFEK 106 (453)
Q Consensus 57 ~~~la~~Aa~~aL~~agi~~~~Id----~li~~t~s~~~--------------------------~~~~~a~~l~~~Lgl 106 (453)
...|+..|++++|+++|+++++++ .+++++..+.. .....+.+|...+|+
T Consensus 72 ~~~l~~~Aa~~AL~dAGl~~~~~~~~r~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl 151 (406)
T PRK08439 72 FIQLGLKAAREAMKDAGFLPEELDAERFGVSSASGIGGLPNIEKNSIICFEKGPRKISPFFIPSALVNMLGGFISIEHGL 151 (406)
T ss_pred HHHHHHHHHHHHHHHcCCCcccCCCCCEEEEEecCCccHHHHHHHHHHHHhcCccccCchhcccccccHHHHHHHHHhCC
Confidence 467899999999999999987776 35555432110 011467788999998
Q ss_pred cCCCCeeEEeeCCcChhHHHHHHHHHHHHHhCCCCCCeEEEEEeec
Q 012909 107 YGNTDIEGVDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDT 152 (453)
Q Consensus 107 ~G~~~~~~~dv~~aC~gg~~AL~~A~~~v~sg~~~~~~aLVv~~d~ 152 (453)
.| +.+.+..+|++++.||..|.++|++|.. +.+||+++|.
T Consensus 152 ~G----p~~~~~~acas~~~Al~~A~~~i~~G~~--d~~lv~g~d~ 191 (406)
T PRK08439 152 KG----PNLSSVTACAAGTHAIIEAVKTIMLGGA--DKMLVVGAES 191 (406)
T ss_pred CC----CccccccHhHHHHHHHHHHHHHHHcCCC--CEEEEecchh
Confidence 33 3566779999999999999999999977 9999999985
No 116
>PRK09116 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=98.32 E-value=4.2e-05 Score=79.60 Aligned_cols=89 Identities=13% Similarity=0.083 Sum_probs=66.4
Q ss_pred HHHHHHHHHHHHHHcCCCc------CCcCEEEEEcccCCC-----------------CC--------c-cHHHHHHHHhc
Q 012909 58 ISMSLTVVTSLLEKYKIDP------TQIGRLEVGSETVID-----------------KS--------K-SIKTFLMQIFE 105 (453)
Q Consensus 58 ~~la~~Aa~~aL~~agi~~------~~Id~li~~t~s~~~-----------------~~--------~-~~a~~l~~~Lg 105 (453)
..|++.|++++|+++|+.. +.+ .|++||..+.. .. + ..+.+|...+|
T Consensus 74 ~~~al~aa~~Al~dAGl~~~~~~~~~r~-Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~~ 152 (405)
T PRK09116 74 SLMATRASELALEDAGLLGDPILTDGRM-GIAYGSSTGSTDPIGAFGTMLLEGSMSGITATTYVRMMPHTTAVNVGLFFG 152 (405)
T ss_pred HHHHHHHHHHHHHHcCCCCccccCCCcE-EEEEeecccchHHHHHHHHHHhhcCccccChhhhhhhcccHHHHHHHHHhC
Confidence 4689999999999999832 233 45566643210 01 1 25677888889
Q ss_pred ccCCCCeeEEeeCCcChhHHHHHHHHHHHHHhCCCCCCeEEEEEeecc
Q 012909 106 KYGNTDIEGVDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDTA 153 (453)
Q Consensus 106 l~G~~~~~~~dv~~aC~gg~~AL~~A~~~v~sg~~~~~~aLVv~~d~~ 153 (453)
+.| +.+.+..+|++++.||..|.++|++|.. +.+||.++|..
T Consensus 153 ~~G----p~~ti~~acas~~~Al~~A~~~I~~G~~--d~~lvgg~d~~ 194 (405)
T PRK09116 153 LKG----RVIPTSSACTSGSQGIGYAYEAIKYGYQ--TVMLAGGAEEL 194 (405)
T ss_pred CCC----CcccccchhhhHHHHHHHHHHHHHcCCC--CEEEEecchhc
Confidence 843 4566789999999999999999999977 89999998863
No 117
>PRK09185 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed
Probab=98.28 E-value=6e-05 Score=78.07 Aligned_cols=52 Identities=17% Similarity=0.237 Sum_probs=45.3
Q ss_pred cHHHHHHHHhcccCCCCeeEEeeCCcChhHHHHHHHHHHHHHhCCCCCCeEEEEEeec
Q 012909 95 SIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDT 152 (453)
Q Consensus 95 ~~a~~l~~~Lgl~G~~~~~~~dv~~aC~gg~~AL~~A~~~v~sg~~~~~~aLVv~~d~ 152 (453)
..+.+|+..||+.| +.+.+..+|++++.||..|..+|++|.. +.|||+++|.
T Consensus 138 ~~a~~ia~~lgl~G----p~~~i~~acas~~~Al~~A~~~I~~G~~--d~vlvgg~d~ 189 (392)
T PRK09185 138 SLADFLRAYLGLSG----PAYTISTACSSSAKVFASARRLLEAGLC--DAAIVGGVDS 189 (392)
T ss_pred HHHHHHHHHhCCCC----CcccccChhHHHHHHHHHHHHHHHcCCC--CEEEEeeccc
Confidence 46788999999832 5777888999999999999999999977 9999999984
No 118
>PRK06690 acetyl-CoA acetyltransferase; Provisional
Probab=98.25 E-value=4.2e-06 Score=85.55 Aligned_cols=91 Identities=12% Similarity=0.170 Sum_probs=77.1
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEEcccCCCCCccHHHHHHHHhcccCCCCeeEEeeCCcChhHHHHHHHHHH
Q 012909 54 VEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCVN 133 (453)
Q Consensus 54 ~ed~~~la~~Aa~~aL~~agi~~~~Id~li~~t~s~~~~~~~~a~~l~~~Lgl~G~~~~~~~dv~~aC~gg~~AL~~A~~ 133 (453)
+..+.+|+..|++.+++ |++ ++||.+++|+..+.. ...+..+...+|+ +..++++.+.++|++|+.|+..|.+
T Consensus 22 ~~~~~~L~~~a~~~~~~--gi~-~~Id~vi~G~~~~~~--~~~~r~~~~~~Gl--~~~~p~~tV~~~CaSG~~Ai~~a~~ 94 (361)
T PRK06690 22 DYEVQQLAAPLLTFLSK--GME-REIDDVILGNVVGPG--GNVARLSALEAGL--GLHIPGVTIDRQCGAGLEAIRTACH 94 (361)
T ss_pred CCCHHHHHHHHHHHHHc--cch-hhcCEEEEEecCCCc--chHHHHHHHHcCC--CCCCCceehhhhhhHHHHHHHHHHH
Confidence 35679999999999865 896 899999999875442 3344457788888 4489999999999999999999999
Q ss_pred HHHhCCCCCCeEEEEEeecc
Q 012909 134 WVESASWDGRYGLVVCTDTA 153 (453)
Q Consensus 134 ~v~sg~~~~~~aLVv~~d~~ 153 (453)
+|++|.. +.+||+++|.+
T Consensus 95 ~I~sG~~--d~~l~gG~E~m 112 (361)
T PRK06690 95 FIQGGAG--KCYIAGGVEST 112 (361)
T ss_pred HHHCCCC--CEEEEeccccc
Confidence 9999976 89999999988
No 119
>PRK07937 lipid-transfer protein; Provisional
Probab=98.25 E-value=5.8e-06 Score=84.29 Aligned_cols=108 Identities=14% Similarity=0.067 Sum_probs=74.4
Q ss_pred eeEcccceEEeccCCCCCH-HHHHHHHHHHHHHHcCCCcCCcCEEEEEcccCCCCCccHHHHHHHHhcccCCCCeeEEee
Q 012909 39 YTVGLGQDCMAFCSEVEDV-ISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDS 117 (453)
Q Consensus 39 ~~~Gig~r~~av~~~~ed~-~~la~~Aa~~aL~~agi~~~~Id~li~~t~s~~~~~~~~a~~l~~~Lgl~G~~~~~~~dv 117 (453)
+.+|+|+..+...++..+. .+|+.+|++++|+++|++++|||.++.++.............+...+|+ ....+...+
T Consensus 5 aIvG~g~t~~~~~~~~~~~~~el~~eA~~~Al~DAgl~~~dID~~~~~~~~~~~~~~~~~~~~~~~~G~--~~~~~~~~v 82 (352)
T PRK07937 5 AVVGFAQAPHVRRTDGTTNGVEMLMPCFAELYAELGITKSDIGFWCSGSSDYLAGRAFSFISAIDSIGA--VPPINESHV 82 (352)
T ss_pred EEEEeeccccccCCCCCCcHHHHHHHHHHHHHHHcCCCHHHCCEEEEEccccccccccchhhHHhhccC--CCCCceEEe
Confidence 3578888877542223444 8999999999999999999999988654321111111112334456665 233344444
Q ss_pred CCcChhHHHHHHHHHHHHHhCCCCCCeEEEEEeecc
Q 012909 118 TNACYGGTAALFNCVNWVESASWDGRYGLVVCTDTA 153 (453)
Q Consensus 118 ~~aC~gg~~AL~~A~~~v~sg~~~~~~aLVv~~d~~ 153 (453)
.+ +|..|+..|...|++|.. +.|||++.|++
T Consensus 83 ~~---~g~~a~~~A~~aI~sG~~--d~VLv~g~~k~ 113 (352)
T PRK07937 83 EM---DAAWALYEAWVKLLTGEV--DTALVYGFGKS 113 (352)
T ss_pred cC---cHHHHHHHHHHHHhcCCC--CEEEEEEeccc
Confidence 43 577899999999999987 99999999975
No 120
>PF07451 SpoVAD: Stage V sporulation protein AD (SpoVAD); InterPro: IPR010894 This family contains the bacterial stage V sporulation protein AD (SpoVAD), which is approximately 340 residues long. This is one of six proteins encoded by the spoVA operon, which is transcribed exclusively in the forespore at about the time of dipicolinic acid (DPA) synthesis in the mother cell. The functions of the proteins encoded by the spoVA operon are unknown, but it has been suggested they are involved in DPA transport during sporulation [].; PDB: 3LMA_D 3LM6_A.
Probab=98.20 E-value=0.00034 Score=68.45 Aligned_cols=96 Identities=17% Similarity=0.069 Sum_probs=73.5
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCEEEEEcccCCCCCccHHHHHHHHhcccCCCCeeEEeeCCcChhHHHHHHHHHHHHH
Q 012909 57 VISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCVNWVE 136 (453)
Q Consensus 57 ~~~la~~Aa~~aL~~agi~~~~Id~li~~t~s~~~~~~~~a~~l~~~Lgl~G~~~~~~~dv~~aC~gg~~AL~~A~~~v~ 136 (453)
-..|..+|++.+|+++++.++|||.++-|---..- -.+++.++.|++ +.+-+-.||+....+|.+|..+|.
T Consensus 51 E~~m~~~A~~~al~Ka~l~~~dId~~~aGDLlnQ~---i~s~f~ar~l~i------Pf~GlygACST~~e~l~laa~~vd 121 (329)
T PF07451_consen 51 ESKMQKEAVELALKKAGLKKEDIDYLFAGDLLNQI---ISSSFAARDLGI------PFLGLYGACSTMMESLALAAMLVD 121 (329)
T ss_dssp HHHHHHHHHHHHHHHTT--GGG-SEEEEEETTCCC---CHHHHHHHHHT--------EEEB--CCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCeEEEehhhhhhh---HHHHHHHHhcCC------CccchhhHHHHHHHHHHHHHHHHh
Confidence 35788999999999999999999999987644432 457888888885 588899999999999999999999
Q ss_pred hCCCCCCeEEEEEeecc---------------------------ceeeeecCCC
Q 012909 137 SASWDGRYGLVVCTDTA---------------------------AVAMLIGPDA 163 (453)
Q Consensus 137 sg~~~~~~aLVv~~d~~---------------------------AvA~Ll~~~~ 163 (453)
+|.. ++||+.++-=. |.|+||++.+
T Consensus 122 gg~a--~~vla~tSSH~~tAERQfR~P~EyG~Qrp~tAqwTVTGaGa~il~~~~ 173 (329)
T PF07451_consen 122 GGFA--DYVLAATSSHFATAERQFRFPTEYGGQRPPTAQWTVTGAGAAILSKEG 173 (329)
T ss_dssp TTS---SEEEEEEEE-CCHHHHHT---GGGT----TT--EE--EEEEEEEESS-
T ss_pred CCCc--ceEEEEeccccchhhhhccCchhccCCCCCcccEEEeceEEEEEecCC
Confidence 9977 89998876432 9999999875
No 121
>PRK06519 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=98.17 E-value=4e-05 Score=79.48 Aligned_cols=138 Identities=12% Similarity=0.000 Sum_probs=88.8
Q ss_pred CceeEEeEEEEEcCCceechhHHhhhh--CCCcCee--------eEc-ccc---eEEeccCC----C-CCHHHHHHHHHH
Q 012909 6 PKNVGILALDIYFPPTCVLQEALEVHD--GVSKGKY--------TVG-LGQ---DCMAFCSE----V-EDVISMSLTVVT 66 (453)
Q Consensus 6 ~~~vgI~~i~~y~P~~~v~~~~l~~~~--g~~~~k~--------~~G-ig~---r~~av~~~----~-ed~~~la~~Aa~ 66 (453)
++.|-|.+||+..|--. +.+++.+.. |.+...+ ..+ +++ +.. ++.. . .....|+..|++
T Consensus 5 ~~rVvITGiG~vsp~G~-~~e~~w~aL~~G~sg~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~r~~~r~~~~a~~Aa~ 82 (398)
T PRK06519 5 PNDVVITGIGLVSSLGE-GLDAHWNALSAGRPQPNVDTETFAPYPVHPLPEIDWSQQ-IPKRGDQRQMETWQRLGTYAAG 82 (398)
T ss_pred CCCEEEEcceEECCCCC-CHHHHHHHHHcCCCCCCCCcccccCcCcccccccChhhc-CCchhhhhccCHHHHHHHHHHH
Confidence 56899999999998654 555544442 2221011 000 111 000 1010 1 124568999999
Q ss_pred HHHHHcCCCcC-----CcCEEEEEcccCCC-----------------------------CCc---------cHHHHHHHH
Q 012909 67 SLLEKYKIDPT-----QIGRLEVGSETVID-----------------------------KSK---------SIKTFLMQI 103 (453)
Q Consensus 67 ~aL~~agi~~~-----~Id~li~~t~s~~~-----------------------------~~~---------~~a~~l~~~ 103 (453)
++|+++|+++. +++ |+++|..+.. ..| ..+.+|...
T Consensus 83 ~Al~dAGl~~~~~~~~r~G-vivGt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n~~a~~is~~ 161 (398)
T PRK06519 83 LALDDAGIKGNEELLSTMD-MIVAAGGGERDIAVDTAILNEARKRNDRGVLLNERLMTELRPTLFLAQLSNLLAGNISIV 161 (398)
T ss_pred HHHHHcCCCCCCCCccceE-EEEEeCCCchhHHHhhhhhhcccchhHHHHHHHhcCCCccChhhhhhhhhhHHHHHHHHH
Confidence 99999998543 333 4555543320 011 255677888
Q ss_pred hcccCCCCeeEEeeCCcChhHHHHHHHHHHHHHhCCCCCCeEEEEEeec
Q 012909 104 FEKYGNTDIEGVDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDT 152 (453)
Q Consensus 104 Lgl~G~~~~~~~dv~~aC~gg~~AL~~A~~~v~sg~~~~~~aLVv~~d~ 152 (453)
+|+.| +.+.+..+|++++.||..|..+|++|.. +.+||.++|.
T Consensus 162 ~gl~G----p~~ti~~acaSg~~Ai~~A~~~I~~G~~--d~~lvGG~d~ 204 (398)
T PRK06519 162 HKVTG----SSRTFMGEESAGVSAIEIAFARIASGQS--DHALVGGAYN 204 (398)
T ss_pred hCCCC----ccccccCCccHHHHHHHHHHHHHHcCCC--CEEEEeeecc
Confidence 88843 4667889999999999999999999976 8999999986
No 122
>PLN02787 3-oxoacyl-[acyl-carrier-protein] synthase II
Probab=98.16 E-value=4.9e-05 Score=81.57 Aligned_cols=139 Identities=14% Similarity=0.139 Sum_probs=88.8
Q ss_pred ceeEEeEEEEEcCCceechhHHhhhh--C---CCc-Ce-----eeEcc-cc-eEEe---ccCC----CCC-HHHHHHHHH
Q 012909 7 KNVGILALDIYFPPTCVLQEALEVHD--G---VSK-GK-----YTVGL-GQ-DCMA---FCSE----VED-VISMSLTVV 65 (453)
Q Consensus 7 ~~vgI~~i~~y~P~~~v~~~~l~~~~--g---~~~-~k-----~~~Gi-g~-r~~a---v~~~----~ed-~~~la~~Aa 65 (453)
+.|.|.++|+.+|--. +.+++.+.. | +.+ .. |..-+ |. +.+. +..+ ..| ...|++.|+
T Consensus 129 ~rVvITG~G~vtp~G~-~~~~~w~~L~~G~s~i~~~~~f~~~~~~~~~ag~i~~f~~~~~l~~k~~r~md~~~~~al~Aa 207 (540)
T PLN02787 129 RRVVVTGMGVVSPLGH-DPDVFYNNLLEGVSGISEIERFDCSQFPTRIAGEIKSFSTDGWVAPKLSKRMDKFMLYLLTAG 207 (540)
T ss_pred CCEEEEeeEEECCCCC-CHHHHHHHHHcCCCcccccCccchhhCCccccccccccChhhcCCHHHHHhCCHHHHHHHHHH
Confidence 4799999999999763 666655443 2 211 11 10000 10 0000 0000 112 245889999
Q ss_pred HHHHHHcCCCcCC---cC----EEEEEcccCCCC----------------C---------ccHHHHHHHHhcccCCCCee
Q 012909 66 TSLLEKYKIDPTQ---IG----RLEVGSETVIDK----------------S---------KSIKTFLMQIFEKYGNTDIE 113 (453)
Q Consensus 66 ~~aL~~agi~~~~---Id----~li~~t~s~~~~----------------~---------~~~a~~l~~~Lgl~G~~~~~ 113 (453)
+++|+++|++++. ++ .|++||..+... . -..+.+|...+|+. -+
T Consensus 208 ~eAL~dAGl~~~~~~~~~~~r~GV~vGt~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~~gl~----Gp 283 (540)
T PLN02787 208 KKALADGGITEDVMKELDKTKCGVLIGSAMGGMKVFNDAIEALRISYRKMNPFCVPFATTNMGSAMLAMDLGWM----GP 283 (540)
T ss_pred HHHHHHcCCCcccccccCCCceEEEEEeccchHHHHHHHHHHHhhccccCCcchhhhhcccHHHHHHHHHhCCC----CC
Confidence 9999999997642 21 466777543200 0 12345778888873 34
Q ss_pred EEeeCCcChhHHHHHHHHHHHHHhCCCCCCeEEEEEeec
Q 012909 114 GVDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDT 152 (453)
Q Consensus 114 ~~dv~~aC~gg~~AL~~A~~~v~sg~~~~~~aLVv~~d~ 152 (453)
.+.+..||+++..||..|.++|++|.. +.+||.++|.
T Consensus 284 ~~tistACASs~~Ai~~A~~~Ir~G~a--D~aLvGG~d~ 320 (540)
T PLN02787 284 NYSISTACATSNFCILNAANHIIRGEA--DVMLCGGSDA 320 (540)
T ss_pred ccccccccccHHHHHHHHHHHHHcCCC--CEEEEecccc
Confidence 667789999999999999999999977 8999999995
No 123
>PRK14691 3-oxoacyl-(acyl carrier protein) synthase II; Provisional
Probab=98.15 E-value=4.4e-05 Score=77.55 Aligned_cols=90 Identities=11% Similarity=0.025 Sum_probs=67.4
Q ss_pred HHHHHHHHHHHHHHHcCC--CcCCcCEEEEEcccCCC-------------C----Cc---------cHHHHHHHHhcccC
Q 012909 57 VISMSLTVVTSLLEKYKI--DPTQIGRLEVGSETVID-------------K----SK---------SIKTFLMQIFEKYG 108 (453)
Q Consensus 57 ~~~la~~Aa~~aL~~agi--~~~~Id~li~~t~s~~~-------------~----~~---------~~a~~l~~~Lgl~G 108 (453)
...++..|++++++++|+ ++++++.+ +||..+.. . .| ..+.+|...+|+.|
T Consensus 4 ~~~~~~~a~~~a~~~a~~~~~~~r~Gv~-~G~~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n~~a~~is~~~~l~G 82 (342)
T PRK14691 4 WWRYKWITFHPSLTHADNTEKQERTATI-IGAGIGGFPAIAHAVRTSDSRGPKRLSPFTVPSFLVNLAAGHVSIKHHFKG 82 (342)
T ss_pred HHHHHHHHHHHHHHhCCCCCCcccEEEE-EecCcccHHHHHHHHHHHHhcCccccChhHHhhhhhhHHHHHHHHHhCCCC
Confidence 356889999999999995 56677644 45532221 0 01 25567788888733
Q ss_pred CCCeeEEeeCCcChhHHHHHHHHHHHHHhCCCCCCeEEEEEeecc
Q 012909 109 NTDIEGVDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDTA 153 (453)
Q Consensus 109 ~~~~~~~dv~~aC~gg~~AL~~A~~~v~sg~~~~~~aLVv~~d~~ 153 (453)
+.+.+..+|++++.||..|.++|++|.. +.+||.++|..
T Consensus 83 ----p~~ti~~aCaSg~~Al~~A~~~I~~G~~--d~~ivgg~d~~ 121 (342)
T PRK14691 83 ----PIGAPVTACAAGVQAIGDAVRMIRNNEA--DVALCGGAEAV 121 (342)
T ss_pred ----CccccccHhHHHHHHHHHHHHHHHcCCC--CEEEEeccccc
Confidence 3566789999999999999999999977 89999998863
No 124
>PRK07967 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed
Probab=98.11 E-value=0.00014 Score=75.61 Aligned_cols=140 Identities=14% Similarity=0.145 Sum_probs=88.6
Q ss_pred ceeEEeEEEEEcCCceechhHHhhhh--C---CCc-Cee-eEcccceEEecc--------C-----CCCCHHHHHHHHHH
Q 012909 7 KNVGILALDIYFPPTCVLQEALEVHD--G---VSK-GKY-TVGLGQDCMAFC--------S-----EVEDVISMSLTVVT 66 (453)
Q Consensus 7 ~~vgI~~i~~y~P~~~v~~~~l~~~~--g---~~~-~k~-~~Gig~r~~av~--------~-----~~ed~~~la~~Aa~ 66 (453)
..|-|.++|+..|--. +.+++.+.. | +.+ ..| ..++..+....+ + .-.....|++.|++
T Consensus 2 ~rVvITG~G~vsp~G~-~~~~~w~~l~~G~sgi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~r~~~~a~~aa~ 80 (406)
T PRK07967 2 RRVVITGLGIVSSIGN-NQQEVLASLREGRSGITFSPEFAEMGMRSQVWGNVKLDPTGLIDRKVMRFMGDASAYAYLAME 80 (406)
T ss_pred CcEEEEcceEECCCCC-CHHHHHHHHHcCCCceeECCcccccCCCCceEEEcCCChhhcCCHHHhhcCCHHHHHHHHHHH
Confidence 4689999999999764 556554442 2 211 111 011111111100 0 01123568899999
Q ss_pred HHHHHcCCCcCCcC----EEEEEcccCCC-----------------C-C---------ccHHHHHHHHhcccCCCCeeEE
Q 012909 67 SLLEKYKIDPTQIG----RLEVGSETVID-----------------K-S---------KSIKTFLMQIFEKYGNTDIEGV 115 (453)
Q Consensus 67 ~aL~~agi~~~~Id----~li~~t~s~~~-----------------~-~---------~~~a~~l~~~Lgl~G~~~~~~~ 115 (453)
++|+++|+++.+++ .|+++|..+.. . . -..+.+|...+|+.| +.+
T Consensus 81 ~Al~dAGl~~~~~~~~rvGv~~gs~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~is~~~~l~G----p~~ 156 (406)
T PRK07967 81 QAIADAGLSEEQVSNPRTGLIAGSGGGSTRNQVEAADAMRGPRGPKRVGPYAVTKAMASTVSACLATPFKIKG----VNY 156 (406)
T ss_pred HHHHHcCCCCccCCCCCEEEEEecCCccHHHHHHHHHHHHhccCcccCCchhhcccccchHHHHHHHHHCCCC----Ccc
Confidence 99999998754332 35555532210 0 0 125677888989833 355
Q ss_pred eeCCcChhHHHHHHHHHHHHHhCCCCCCeEEEEEeecc
Q 012909 116 DSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDTA 153 (453)
Q Consensus 116 dv~~aC~gg~~AL~~A~~~v~sg~~~~~~aLVv~~d~~ 153 (453)
.+..+|++++.||..|.++|++|.. +.+||.++|..
T Consensus 157 tvs~aCas~~~Ai~~A~~~ir~G~~--d~~lvgg~d~~ 192 (406)
T PRK07967 157 SISSACATSAHCIGNAVEQIQLGKQ--DIVFAGGGEEL 192 (406)
T ss_pred ccccHhHHHHHHHHHHHHHHHcCCC--CEEEEeeeccc
Confidence 6899999999999999999999977 89999998753
No 125
>PRK07910 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=97.97 E-value=0.00079 Score=70.36 Aligned_cols=89 Identities=11% Similarity=0.059 Sum_probs=63.8
Q ss_pred HHHHHHHHHHHHHHcCC---CcCCcCEEEEEcccCCC-----------------C---------CccHHHHHHHHhcccC
Q 012909 58 ISMSLTVVTSLLEKYKI---DPTQIGRLEVGSETVID-----------------K---------SKSIKTFLMQIFEKYG 108 (453)
Q Consensus 58 ~~la~~Aa~~aL~~agi---~~~~Id~li~~t~s~~~-----------------~---------~~~~a~~l~~~Lgl~G 108 (453)
.-|++.|++++|+++|+ +++.++ +++||..+.. . .-..+.++...+|+.|
T Consensus 84 ~~~~l~aa~~AledAg~~~~~~~r~G-v~~G~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~~~~G 162 (418)
T PRK07910 84 QRMSTVLGRRVWENAGSPEVDTNRLM-VSIGTGLGSAEELVFAYDDMRARGLRAVSPLAVQMYMPNGPAAAVGLERHAKA 162 (418)
T ss_pred HHHHHHHHHHHHHHcCCCCCCcccEE-EEEEEccCccHhHHHHHHHHHhcCcccCChhHHHHhccccHHHHHHHHhCCCC
Confidence 34888999999999996 455565 4455543210 0 0124455666667632
Q ss_pred CCCeeEEeeCCcChhHHHHHHHHHHHHHhCCCCCCeEEEEEeecc
Q 012909 109 NTDIEGVDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDTA 153 (453)
Q Consensus 109 ~~~~~~~dv~~aC~gg~~AL~~A~~~v~sg~~~~~~aLVv~~d~~ 153 (453)
+.+.+..+|++++.||..|.++|++|.. +.+||.++|..
T Consensus 163 ----~~~ti~taCaS~~~Al~~A~~~I~~G~~--d~aivgg~~~~ 201 (418)
T PRK07910 163 ----GVITPVSACASGSEAIAQAWRQIVLGEA--DIAICGGVETR 201 (418)
T ss_pred ----CcccccchhHHHHHHHHHHHHHHHcCCC--CEEEEcccccc
Confidence 3556689999999999999999999976 89999999874
No 126
>PF00109 ketoacyl-synt: Beta-ketoacyl synthase, N-terminal domain; InterPro: IPR014030 Beta-ketoacyl-ACP synthase 2.3.1.41 from EC (KAS) [] is the enzyme that catalyzes the condensation of malonyl-ACP with the growing fatty acid chain. It is found as a component of a number of enzymatic systems, including fatty acid synthetase (FAS), which catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH; the multi-functional 6-methysalicylic acid synthase (MSAS) from Penicillium patulum [], which is involved in the biosynthesis of a polyketide antibiotic; polyketide antibiotic synthase enzyme systems; Emericella nidulans multifunctional protein Wa, which is involved in the biosynthesis of conidial green pigment; Rhizobium nodulation protein nodE, which probably acts as a beta-ketoacyl synthase in the synthesis of the nodulation Nod factor fatty acyl chain; and yeast mitochondrial protein CEM1. The condensation reaction is a two step process, first the acyl component of an activated acyl primer is transferred to a cysteine residue of the enzyme and is then condensed with an activated malonyl donor with the concomitant release of carbon dioxide. This entry represents the N-terminal domain of beta-ketoacyl-ACP synthases. ; PDB: 1J3N_B 3KZU_C 1W0I_A 2IX4_A 1F91_B 2BYZ_D 2AQB_C 2BZ3_C 1H4F_C 2VB9_B ....
Probab=97.95 E-value=3.9e-05 Score=74.14 Aligned_cols=91 Identities=23% Similarity=0.225 Sum_probs=67.9
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCc-----CEEEEEcccCCC---------------C---------CccHHHHHHHHhccc
Q 012909 57 VISMSLTVVTSLLEKYKIDPTQI-----GRLEVGSETVID---------------K---------SKSIKTFLMQIFEKY 107 (453)
Q Consensus 57 ~~~la~~Aa~~aL~~agi~~~~I-----d~li~~t~s~~~---------------~---------~~~~a~~l~~~Lgl~ 107 (453)
..-|++.|+.++|+++|+++.++ -.|++|+..+.. . .-..+.+|...+|+.
T Consensus 87 ~~~~~l~aa~~Al~dAg~~~~~~~~~~r~gv~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl~ 166 (254)
T PF00109_consen 87 QSRLALAAAREALEDAGLDPDDLDGERRVGVFVGSSSGDYEFYRALDEDGETPRDVSPWFVPNTLPNSAAGRIAILFGLR 166 (254)
T ss_dssp HHHHHHHHHHHHHHHHTSTGGGHTGGGTEEEEEEESSSHHHHHHHHHHHTTCGGGSHTTHHHHHSTTHHHHHHHHHHTB-
T ss_pred hhhHHHHHhhhhcccccccccccccccceeeccccccccccccccccccccccccccccccCcccccccccchhhhcCCC
Confidence 35789999999999999988533 235566655511 0 112567889999983
Q ss_pred CCCCeeEEeeCCcChhHHHHHHHHHHHHHhCCCCCCeEEEEEeecc
Q 012909 108 GNTDIEGVDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDTA 153 (453)
Q Consensus 108 G~~~~~~~dv~~aC~gg~~AL~~A~~~v~sg~~~~~~aLVv~~d~~ 153 (453)
| +.+-+..+|++++.||..|..+|++|.. +.+||.++|..
T Consensus 167 G----~~~tv~~acaSgl~Al~~A~~~I~~G~~--d~~lvgg~d~~ 206 (254)
T PF00109_consen 167 G----PSYTVSTACASGLAALEAAYRAIRSGEA--DVALVGGVDAP 206 (254)
T ss_dssp S----SEEEEE-GGGHHHHHHHHHHHHHHTTSS--SEEEEEEEE--
T ss_pred C----ccccccccccccccccchhccccccccc--ccccccccccc
Confidence 3 3566889999999999999999999976 99999999943
No 127
>COG0183 PaaJ Acetyl-CoA acetyltransferase [Lipid metabolism]
Probab=97.75 E-value=9.4e-05 Score=76.58 Aligned_cols=93 Identities=14% Similarity=0.147 Sum_probs=72.7
Q ss_pred HHHHHHHHHHHHHHHc--CCCcCCcCEEEEEcccCCC-CCccHHHHHHHHhcccCCCCeeEEeeCCcChhHHHHHHHHHH
Q 012909 57 VISMSLTVVTSLLEKY--KIDPTQIGRLEVGSETVID-KSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCVN 133 (453)
Q Consensus 57 ~~~la~~Aa~~aL~~a--gi~~~~Id~li~~t~s~~~-~~~~~a~~l~~~Lgl~G~~~~~~~dv~~aC~gg~~AL~~A~~ 133 (453)
..++.....+..+++. ++++.+||.+++|+..+.. .....+..+...+|+ +.+++++.++.+|.+|..|+..|+.
T Consensus 27 ~e~l~~a~~~a~~~~~~~~vd~~~v~~~~~G~~~~~g~~~~~~ar~~a~~aGl--~~~~p~~~V~~~c~SG~~Av~~A~~ 104 (392)
T COG0183 27 AEALGAALIDAGLERAPADVDAADVDDVILGCVLQAGEQGQNIARQAALAAGL--PGSVPAVTVNRACASGLAAVRLAAQ 104 (392)
T ss_pred HHHHHHHHHHHHhhhccccCCHHHhhhheeccccccccccccHHHHHHHHcCC--CCCCCceEEeccchhHHHHHHHHHH
Confidence 3444444444444332 4666678888988765542 355788899999998 4569999999999999999999999
Q ss_pred HHHhCCCCCCeEEEEEeecc
Q 012909 134 WVESASWDGRYGLVVCTDTA 153 (453)
Q Consensus 134 ~v~sg~~~~~~aLVv~~d~~ 153 (453)
.|++|.. +.+|+++.|.+
T Consensus 105 ~I~sG~~--dvvlagG~E~m 122 (392)
T COG0183 105 AIASGEA--DVVLAGGVEKM 122 (392)
T ss_pred HHHCCCC--CEEEEEeeeec
Confidence 9999976 99999999998
No 128
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA. Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.
Probab=97.37 E-value=0.0033 Score=78.25 Aligned_cols=52 Identities=17% Similarity=0.082 Sum_probs=44.1
Q ss_pred HHHHHHHHhcccCCCCeeEEeeCCcChhHHHHHHHHHHHHHhCCCCCCeEEEEEeecc
Q 012909 96 IKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDTA 153 (453)
Q Consensus 96 ~a~~l~~~Lgl~G~~~~~~~dv~~aC~gg~~AL~~A~~~v~sg~~~~~~aLVv~~d~~ 153 (453)
++.+|...||+.| +.+-+..||+|++.||..|+++|++|.. +.+||.+++..
T Consensus 185 ~A~RIS~~f~L~G----ps~tVdtACsSSL~Al~~A~~~L~~G~~--D~alvGGv~~~ 236 (2582)
T TIGR02813 185 ISGRIANRFDLGG----MNCVVDAACAGSLAAIRMALSELLEGRS--EMMITGGVCTD 236 (2582)
T ss_pred HHHHHHHHhCCCC----CcccccchhHHHHHHHHHHHHHHHcCCC--CEEEEecceee
Confidence 4678888888833 4677899999999999999999999976 89999888763
No 129
>KOG1390 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism]
Probab=97.13 E-value=0.0011 Score=64.95 Aligned_cols=96 Identities=7% Similarity=0.085 Sum_probs=79.6
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEEcccCCCCCccHHHHHHHHhcccCCCCeeEEeeCCcChhHHHHHHHHHH
Q 012909 54 VEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCVN 133 (453)
Q Consensus 54 ~ed~~~la~~Aa~~aL~~agi~~~~Id~li~~t~s~~~~~~~~a~~l~~~Lgl~G~~~~~~~dv~~aC~gg~~AL~~A~~ 133 (453)
.-.+.+|+.-|.+.+|+++.++|++++-+|+|..-.-...-..+....---|| +..+++..++.-|++|+.|+.+|.+
T Consensus 27 sl~A~~Lgsvaikaalera~v~~~~v~eVi~GnVl~AnlGQapaRQaalgAGl--p~sv~~tTvNkvCaSgmKAv~laaQ 104 (396)
T KOG1390|consen 27 SLTATELGSVAIKAALERAVVPPSDVAEVIFGNVLSANLGQAPARQAALGAGL--PYSVPATTVNKVCASGMKAVILAAQ 104 (396)
T ss_pred cCchhhHHHHHHHHHHHhcCCCHHHhhhhhhccccccccCcchHHHHHhhcCC--CcceeeEeehhhhhhhHHHHHHHHH
Confidence 45678999999999999999999999999998765544444455555555566 6788999999999999999999999
Q ss_pred HHHhCCCCCCeEEEEEeecc
Q 012909 134 WVESASWDGRYGLVVCTDTA 153 (453)
Q Consensus 134 ~v~sg~~~~~~aLVv~~d~~ 153 (453)
-|+.|.. +.++..+.|.|
T Consensus 105 sI~~G~~--divVaGGmEsM 122 (396)
T KOG1390|consen 105 SIQTGHA--DIVVAGGMESM 122 (396)
T ss_pred HHhcCCc--cEEEecccchh
Confidence 9999955 78888888887
No 130
>COG3321 Polyketide synthase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=97.10 E-value=0.0065 Score=70.47 Aligned_cols=88 Identities=15% Similarity=0.095 Sum_probs=71.7
Q ss_pred HHHHHHHHHHHHcCCCcCCcC----EEEEEcccCCCCCc-------------------cHHHHHHHHhcccCCCCeeEEe
Q 012909 60 MSLTVVTSLLEKYKIDPTQIG----RLEVGSETVIDKSK-------------------SIKTFLMQIFEKYGNTDIEGVD 116 (453)
Q Consensus 60 la~~Aa~~aL~~agi~~~~Id----~li~~t~s~~~~~~-------------------~~a~~l~~~Lgl~G~~~~~~~d 116 (453)
|..+.+.++|+++|++|+.+. .|++|.....+... -.+..|...|++.| +.+.
T Consensus 94 llLe~aw~AlEdAG~~~~~l~g~~tgV~~g~~~~~y~~~~~~~~~~~~~~~~~g~~~~~~a~Risy~l~l~G----Ps~~ 169 (1061)
T COG3321 94 LLLEVAWEALEDAGIYPDSLRGSATGVFAGASVADYLLLLLADDEAEPEYAITGNSSSVAAGRISYVLGLSG----PSVT 169 (1061)
T ss_pred HHHHHHHHHHHHcCCCccccCCcceEEEEeeccCccccccccccccccceecccchhhHHHHHHHHHhcCCC----CCcc
Confidence 889999999999999999888 56666655544322 16678889999844 4677
Q ss_pred eCCcChhHHHHHHHHHHHHHhCCCCCCeEEEEEeecc
Q 012909 117 STNACYGGTAALFNCVNWVESASWDGRYGLVVCTDTA 153 (453)
Q Consensus 117 v~~aC~gg~~AL~~A~~~v~sg~~~~~~aLVv~~d~~ 153 (453)
|..+|++++.|++.|+..|.+|.. +.+|+-+..+.
T Consensus 170 vdtaCSSsLvAvhlA~~sL~~Ge~--d~alaGgv~l~ 204 (1061)
T COG3321 170 VDTACSSSLVAVHLACQSLRLGEC--DLALAGGVNLV 204 (1061)
T ss_pred ccchhhHHHHHHHHHHHHHHcCCC--CEEEecceEec
Confidence 899999999999999999999955 88888877765
No 131
>COG0304 FabB 3-oxoacyl-(acyl-carrier-protein) synthase [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=97.07 E-value=0.0064 Score=63.19 Aligned_cols=92 Identities=16% Similarity=0.190 Sum_probs=66.0
Q ss_pred CHHHHHHHHHHHHHHHcCCC-cCCcC---EEEEEcccCC-C---------------C--C--------c-cHHHHHHHHh
Q 012909 56 DVISMSLTVVTSLLEKYKID-PTQIG---RLEVGSETVI-D---------------K--S--------K-SIKTFLMQIF 104 (453)
Q Consensus 56 d~~~la~~Aa~~aL~~agi~-~~~Id---~li~~t~s~~-~---------------~--~--------~-~~a~~l~~~L 104 (453)
....+++.|+.++|+++|++ ...++ .+++||..+. . . . + ..+..++..+
T Consensus 70 ~~~~~a~~Aa~eAl~dAgl~~~~~~~~r~gv~iGsg~gg~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~vs~~~ 149 (412)
T COG0304 70 RFSQLAVVAAVEALEDAGLDNELNVDMRVGVAIGSGIGGLEDIEFDLDALLLEGLRKRISPFLVPKMLPNLAAGNVAIVF 149 (412)
T ss_pred HHHHHHHHHHHHHHHHcCCCcccccCccEEEEEeccCCCcchhhhHHHHHHhcCCccCcCchhhhhhccchHHHHHHHHh
Confidence 35789999999999999997 33342 2334443211 0 0 0 1 3456677788
Q ss_pred cccCCCCeeEEeeCCcChhHHHHHHHHHHHHHhCCCCCCeEEEEEeecc
Q 012909 105 EKYGNTDIEGVDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDTA 153 (453)
Q Consensus 105 gl~G~~~~~~~dv~~aC~gg~~AL~~A~~~v~sg~~~~~~aLVv~~d~~ 153 (453)
|+.| +.+.+..+|+++..|+..|.++|+.|.. +.+|+.++|-.
T Consensus 150 g~~G----~~~~~~tACatg~~AIg~A~~~I~~G~a--d~~iaGG~e~~ 192 (412)
T COG0304 150 GLKG----PNYTPVTACATGAHAIGDAVRLIRLGKA--DVVIAGGAEAA 192 (412)
T ss_pred CCCC----CcCChhhhHHhHHHHHHHHHHHHHcCCC--CEEEEcccccc
Confidence 8743 3456789999999999999999999977 89999999763
No 132
>KOG1391 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism]
Probab=96.81 E-value=0.0017 Score=61.99 Aligned_cols=97 Identities=11% Similarity=0.125 Sum_probs=77.1
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEEcccCCCCCccHHHHHHHHhcc-cC-CCCeeEEeeCCcChhHHHHHHHH
Q 012909 54 VEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEK-YG-NTDIEGVDSTNACYGGTAALFNC 131 (453)
Q Consensus 54 ~ed~~~la~~Aa~~aL~~agi~~~~Id~li~~t~s~~~~~~~~a~~l~~~Lgl-~G-~~~~~~~dv~~aC~gg~~AL~~A 131 (453)
+-+..+|.+.|++.+|+.+++.++.+|.||++..-. +.+-+.|+.+..|| .| +...+++.++--|.+|.+++.++
T Consensus 25 g~~aTdL~~~AakAAL~aa~v~~e~VD~VI~GNV~a---SSsDgIYl~RHvGL~~GvP~e~pALtiNRLCGSGFQsiVNg 101 (396)
T KOG1391|consen 25 GLSATDLGVVAAKAALKAANVGAEAVDHVIMGNVLA---SSSDGIYLARHVGLRVGVPKETPALTINRLCGSGFQSIVNG 101 (396)
T ss_pred CcchhhHHHHHHHHHHhhcCCChhhcceEEEeeeee---ccCCceEeeeccccccCCcCccCceeehhhhcccHHHHHhh
Confidence 456789999999999999999999999999886422 12234566666665 12 56788999999999999999999
Q ss_pred HHHHHhCCCCCCeEEEEEeeccce
Q 012909 132 VNWVESASWDGRYGLVVCTDTAAV 155 (453)
Q Consensus 132 ~~~v~sg~~~~~~aLVv~~d~~Av 155 (453)
++-|.-|.. +.||.-+.|.+.-
T Consensus 102 aQ~I~vgea--~ivL~GGtEnMSq 123 (396)
T KOG1391|consen 102 AQEICVGEA--EIVLCGGTENMSQ 123 (396)
T ss_pred HHHhhcCcc--eEEEecCcccccc
Confidence 999999865 7777778887733
No 133
>KOG1392 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism]
Probab=96.30 E-value=0.0029 Score=61.24 Aligned_cols=95 Identities=14% Similarity=0.082 Sum_probs=76.8
Q ss_pred CCHHHHHHHHHHHHHHHcCCCcCCcCEEEEEcccCCCCCccHHHHHHHHhcccCCCCeeEEeeCCcChhHHHHHHHHHHH
Q 012909 55 EDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCVNW 134 (453)
Q Consensus 55 ed~~~la~~Aa~~aL~~agi~~~~Id~li~~t~s~~~~~~~~a~~l~~~Lgl~G~~~~~~~dv~~aC~gg~~AL~~A~~~ 134 (453)
--+.+|+.+|...+|++..++.+.||.||+||.-..-....++..-+-.-|. +..+++..+..+|-+.-.|+.....+
T Consensus 64 lmphdlar~al~~ll~kt~lpke~~dyii~gtviqevktsniareaal~agf--sdktpahtvtmacissn~amttgmgl 141 (465)
T KOG1392|consen 64 LMPHDLAREALKALLEKTKLPKEQLDYIICGTVIQEVKTSNIAREAALLAGF--SDKTPAHTVTMACISSNVAMTTGMGL 141 (465)
T ss_pred hchhHHHHHHHHHHHHhccCCHHHhceeeehhhHHHHhcchHHHHHHHhcCC--CCCCccceeeeehhccchhhhcccee
Confidence 3467999999999999999999999999999976554444566665556666 67788999999999999999999999
Q ss_pred HHhCCCCCCeEEEEEeecc
Q 012909 135 VESASWDGRYGLVVCTDTA 153 (453)
Q Consensus 135 v~sg~~~~~~aLVv~~d~~ 153 (453)
|++|.+ +.++.-+.|.+
T Consensus 142 iatg~~--dvivaggvelm 158 (465)
T KOG1392|consen 142 IATGNA--DVIVAGGVELM 158 (465)
T ss_pred EeeCCc--CEEEEcceeec
Confidence 999976 44444455655
No 134
>KOG1389 consensus 3-oxoacyl CoA thiolase [Lipid transport and metabolism]
Probab=95.50 E-value=0.029 Score=55.14 Aligned_cols=95 Identities=15% Similarity=0.244 Sum_probs=78.2
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEEcccCCCCCccHHHHHHHHh-cccCCCCeeEEeeCCcChhHHHHHHHHH
Q 012909 54 VEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIF-EKYGNTDIEGVDSTNACYGGTAALFNCV 132 (453)
Q Consensus 54 ~ed~~~la~~Aa~~aL~~agi~~~~Id~li~~t~s~~~~~~~~a~~l~~~L-gl~G~~~~~~~dv~~aC~gg~~AL~~A~ 132 (453)
+..+-+|-..+.+.++++.+++|+.|+-|++|++-.+... ...+.++..+ |+ +..++...++--|++|+.|+...+
T Consensus 58 dt~pDeLl~~vl~a~ie~t~~dp~~igdi~vG~vL~pg~g-a~e~R~a~~~ag~--P~tvpv~tvNRqCsSGLqaVadiA 134 (435)
T KOG1389|consen 58 DTRPDELLAAVLRAVIEKTNLDPSLIGDIVVGTVLAPGSG-ASECRMAAFYAGF--PETVPVRTVNRQCSSGLQAVADIA 134 (435)
T ss_pred cCChHHHHHHHHHHHHhhcCCCHHHhcceeeeeccCCCcc-hHHHHHHHHHcCC--CcccchhhhhhhhhhHHHHHHHHH
Confidence 3456689999999999999999999999999998766533 5566665544 55 667777778899999999999999
Q ss_pred HHHHhCCCCCCeEEEEEeecc
Q 012909 133 NWVESASWDGRYGLVVCTDTA 153 (453)
Q Consensus 133 ~~v~sg~~~~~~aLVv~~d~~ 153 (453)
.-|++|.+ +..|-.+.|-+
T Consensus 135 ~~Ir~G~y--dIGla~GvESM 153 (435)
T KOG1389|consen 135 AKIRAGFY--DIGLAAGVESM 153 (435)
T ss_pred HHHhcCce--eeecccchhhh
Confidence 99999988 77888888876
No 135
>PF13723 Ketoacyl-synt_2: Beta-ketoacyl synthase, N-terminal domain
Probab=95.47 E-value=0.13 Score=48.94 Aligned_cols=101 Identities=16% Similarity=0.105 Sum_probs=72.1
Q ss_pred CHHHHHHHHHHHHHHHcCCCcCCcCEEEEEcccCCC---------------CCc-----cHHHHHHHHhcccCCCCeeEE
Q 012909 56 DVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVID---------------KSK-----SIKTFLMQIFEKYGNTDIEGV 115 (453)
Q Consensus 56 d~~~la~~Aa~~aL~~agi~~~~Id~li~~t~s~~~---------------~~~-----~~a~~l~~~Lgl~G~~~~~~~ 115 (453)
...-|++.++..++.+. .++|.+|++|..++- .+| |+-+-+...+.+.-....+..
T Consensus 33 ~~~rla~~~a~~~~~~~----~~~d~~VfaS~~Gel~~t~~ll~~l~~~~~lSPT~Fs~SVHNA~aG~~sI~~~~~~~~t 108 (218)
T PF13723_consen 33 RLSRLALEAALECLAED----EQPDAIVFASRHGELERTFKLLEALAEEEELSPTAFSQSVHNAAAGYWSIATKNTGPNT 108 (218)
T ss_pred HHHHHHHHHHHHHHhcc----CCCCcEEEEeCCCcHHHHHHHHHHHHhCCCcCccchhhhhhhHHHHHHHHHhCCCCceE
Confidence 47889999999998653 467899999876641 223 122223334443112345566
Q ss_pred eeCCcChhHHHHHHHHHHHHHhCCCCCCeEEEEEeecc------------------ceeeeecCCC
Q 012909 116 DSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDTA------------------AVAMLIGPDA 163 (453)
Q Consensus 116 dv~~aC~gg~~AL~~A~~~v~sg~~~~~~aLVv~~d~~------------------AvA~Ll~~~~ 163 (453)
-+..+=.++..||.-|..+++.| . +.||||+.|-. |+|++|++..
T Consensus 109 al~a~~~sf~~aLleA~~~l~~~-~--~~VLlv~~De~~p~~y~~~~~~~~~~~~~A~al~L~~~~ 171 (218)
T PF13723_consen 109 ALAAGEDSFEAALLEAAAQLAEG-A--EPVLLVCYDEPLPEPYQEFRPERDPPFPYALALVLSPGD 171 (218)
T ss_pred EEecCcchHHHHHHHHHHHHHcC-C--CCEEEEEeCCCCChhhhhcccccCCCcCEEEEEEecCCC
Confidence 67788889999999999999998 4 89999999975 7888887764
No 136
>PF08541 ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ; InterPro: IPR013747 This domain is found on 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 2.3.1.41 from EC, the enzyme responsible for initiating the chain of reactions of the fatty acid synthase in plants and bacteria. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008610 lipid biosynthetic process; PDB: 3IL3_A 1ZOW_C 3GWE_B 3GWA_B 1UB7_B 3LED_B 2EBD_A 1HNJ_A 2EFT_B 1HN9_B ....
Probab=94.99 E-value=0.074 Score=42.84 Aligned_cols=74 Identities=16% Similarity=0.100 Sum_probs=43.0
Q ss_pred HHHcCCCcCCcCEEEEEcccCCCCCccHHHHHHHHhcccCCCCeeEEeeC----CcChhHHHHHHHHHHHHHhCC-CCCC
Q 012909 69 LEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDST----NACYGGTAALFNCVNWVESAS-WDGR 143 (453)
Q Consensus 69 L~~agi~~~~Id~li~~t~s~~~~~~~~a~~l~~~Lgl~G~~~~~~~dv~----~aC~gg~~AL~~A~~~v~sg~-~~~~ 143 (453)
|+++|++++|||.++.... ++.....+.+.+|+ ++......+. .+|++-..+| ...++.|. .||+
T Consensus 1 L~~~g~~~~did~~i~hq~-----~~~~~~~~~~~lgi--~~~~~~~~~~~~Gn~~sa~~~~~L---~~~~~~g~~~~Gd 70 (90)
T PF08541_consen 1 LERAGLSPDDIDHFIPHQA-----SKKILDSIAKRLGI--PPERFPDNLAEYGNTGSASIPINL---ADALEEGRIKPGD 70 (90)
T ss_dssp HHHTT--GGGESEEEE-SS-----SHHHHHHHHHHHTS---GGGBE-THHHH-B-GGGHHHHHH---HHHHHTTSSCTTE
T ss_pred CccccCCHHHCCEEEeCCC-----CHHHHHHHHHHcCC--cHHHHHHHHhccCcchhhhHHHHH---HHHHHcCCCCCCC
Confidence 6899999999999998653 33445558889998 4443333332 2444444444 34444432 2678
Q ss_pred eEEEEEeec
Q 012909 144 YGLVVCTDT 152 (453)
Q Consensus 144 ~aLVv~~d~ 152 (453)
++|+++.-.
T Consensus 71 ~vl~~~~G~ 79 (90)
T PF08541_consen 71 RVLLVGFGA 79 (90)
T ss_dssp EEEEEEEET
T ss_pred EEEEEEEEh
Confidence 999998765
No 137
>KOG1394 consensus 3-oxoacyl-(acyl-carrier-protein) synthase (I and II) [Lipid transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism]
Probab=94.80 E-value=0.098 Score=52.53 Aligned_cols=92 Identities=11% Similarity=0.107 Sum_probs=64.1
Q ss_pred CHHHHHHHHHHHHHHHcCCCcC---CcC----EEEEEcccCC---------------------CCCc-----cHHHHHHH
Q 012909 56 DVISMSLTVVTSLLEKYKIDPT---QIG----RLEVGSETVI---------------------DKSK-----SIKTFLMQ 102 (453)
Q Consensus 56 d~~~la~~Aa~~aL~~agi~~~---~Id----~li~~t~s~~---------------------~~~~-----~~a~~l~~ 102 (453)
+...|++.|+.++|+++++.+. +.| .|.+||..+. +..| -.+.+|.-
T Consensus 93 ~~~~~al~aa~eAL~da~~~~~~~~e~dk~~~GV~iGtgmg~l~~i~e~a~~~~~~g~rrvsPffVPkil~NM~ag~vsm 172 (440)
T KOG1394|consen 93 KFTKLALTAAEEALKDAGLLDVNLSEEDKEKTGVLIGTGMGDLEDIYETAQNLSEKGYRRVSPFFVPKILTNMAAGYVSM 172 (440)
T ss_pred HHHHHHHHHHHHHHHhcCCCCcccchhhhhhhceEeccccccHHHHHHHHHHHHHhcccccCccccchhhcccccchhhh
Confidence 3567999999999999997665 222 3445553321 1111 13456777
Q ss_pred HhcccCCCCeeEEeeCCcChhHHHHHHHHHHHHHhCCCCCCeEEEEEeecc
Q 012909 103 IFEKYGNTDIEGVDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDTA 153 (453)
Q Consensus 103 ~Lgl~G~~~~~~~dv~~aC~gg~~AL~~A~~~v~sg~~~~~~aLVv~~d~~ 153 (453)
.+|+-| +...+..||+.|..++-.|.++|+.|.. +..|.-++|.+
T Consensus 173 ~~gl~G----pnhsvSTACATg~h~igda~n~Ir~Gda--DvmlAGgsE~~ 217 (440)
T KOG1394|consen 173 KYGLRG----PNHSVSTACATGNHCIGDAFNFIRLGDA--DVMLAGGSEAC 217 (440)
T ss_pred hhcCcC----CchhhHhhhhhccchHHHHHHHHHhCcc--ceeeccCccee
Confidence 778733 3445688999999999999999999955 67777777876
No 138
>PRK06147 3-oxoacyl-(acyl carrier protein) synthase; Validated
Probab=93.95 E-value=0.25 Score=50.32 Aligned_cols=100 Identities=11% Similarity=-0.016 Sum_probs=61.5
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEE-EcccCCCCCccHHHHHHHHhcccCCCCeeEEeeC---C--cChhHHHHHHHHHHH
Q 012909 61 SLTVVTSLLEKYKIDPTQIGRLEV-GSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDST---N--ACYGGTAALFNCVNW 134 (453)
Q Consensus 61 a~~Aa~~aL~~agi~~~~Id~li~-~t~s~~~~~~~~a~~l~~~Lgl~G~~~~~~~dv~---~--aC~gg~~AL~~A~~~ 134 (453)
..+|.+++|+++|++|++||.|+. +|.+.. ....-+.-+.+.++.. ....+....+ . +.++|...+..+...
T Consensus 236 l~~ai~~AL~~agl~~~dId~v~ah~~gt~~-~d~~e~~A~~~~f~~~-~~~~~~~~~k~~~Gh~~aAaG~~~~~~a~~~ 313 (348)
T PRK06147 236 LTQAIRAALAEAGCGLEDMDYRIADLNGEQY-RFKEAALAEMRLFRVR-KEFFDLWHPAECIGEIGAAIGPALLGVALAA 313 (348)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEcCCCCCcc-chHHHHHHHHHHhhhc-cCCCceecchHhhcchHHHHHHHHHHHHHHH
Confidence 458899999999999999999884 333332 2223334455566531 1122222222 2 333444445555566
Q ss_pred HHhCCCCCCeEEEEEeecc--ceeeeecCC
Q 012909 135 VESASWDGRYGLVVCTDTA--AVAMLIGPD 162 (453)
Q Consensus 135 v~sg~~~~~~aLVv~~d~~--AvA~Ll~~~ 162 (453)
++.|..|+.++||.+++-- =+||+|+..
T Consensus 314 ~~~g~~~g~~~L~~s~~d~g~r~a~~l~~~ 343 (348)
T PRK06147 314 SRKGYGPGPNVLCHLSDDDGARAALVLEYR 343 (348)
T ss_pred HHcCcCCCCcEEEEecCCCCceEEEEEecc
Confidence 7778778899999998776 556676654
No 139
>PRK07850 acetyl-CoA acetyltransferase; Provisional
Probab=92.56 E-value=1.2 Score=46.03 Aligned_cols=124 Identities=15% Similarity=0.118 Sum_probs=66.7
Q ss_pred eechhHHhhhhCCCcCeeeEcccceEEeccCCCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEEcccCCCCCccHHHHHH
Q 012909 22 CVLQEALEVHDGVSKGKYTVGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLM 101 (453)
Q Consensus 22 ~v~~~~l~~~~g~~~~k~~~Gig~r~~av~~~~ed~~~la~~Aa~~aL~~agi~~~~Id~li~~t~s~~~~~~~~a~~l~ 101 (453)
.|..++.++..+.+|--...|.+... . .+ .....-...|++++|+++|++|+|||.+.+.-... .......
T Consensus 252 vl~see~A~~l~~~p~~~i~g~~~~~--~-~~-~~~~~~~~~a~~~al~~agl~~~did~~ei~d~F~-----~~~l~~~ 322 (387)
T PRK07850 252 LWMDEDRARALGLRPRARIVAQALVG--A-EP-YYHLDGPVQATAKVLEKAGMKIGDIDLVEINEAFA-----SVVLSWA 322 (387)
T ss_pred EEecHHHHHHcCCCCcEEEEEEEEec--c-Cc-hhhcchHHHHHHHHHHHcCCCHHHcCeeeecccch-----HHHHHHH
Confidence 44556677777765532223444211 1 11 12233457899999999999999999998843222 2233334
Q ss_pred HHhcccCCCCeeEEeeC---------CcChhHHHHHHHHHHHHHhCCCCCCeEEEEEee--ccceeeeecC
Q 012909 102 QIFEKYGNTDIEGVDST---------NACYGGTAALFNCVNWVESASWDGRYGLVVCTD--TAAVAMLIGP 161 (453)
Q Consensus 102 ~~Lgl~G~~~~~~~dv~---------~aC~gg~~AL~~A~~~v~sg~~~~~~aLVv~~d--~~AvA~Ll~~ 161 (453)
+.||+ ... -+.+. .+|+ |+..+..+...|+.. ++++.|+..+- -.+.||||+.
T Consensus 323 e~lg~--~~~--pvN~~GG~la~Ghp~gat-G~~~v~e~~~qL~~~--~~~~g~~~~c~~gg~g~a~~~e~ 386 (387)
T PRK07850 323 QVHEP--DMD--KVNVNGGAIALGHPVGST-GARLITTALHELERT--DKSTALITMCAGGALSTGTIIER 386 (387)
T ss_pred HHcCC--CCC--CcCCCCchhhcCCCcchh-HHHHHHHHHHHHHhc--CCCeEEEEEccccCceeEEEEEe
Confidence 66775 111 22221 2333 444444455555443 34666655222 2278888764
No 140
>PRK13359 beta-ketoadipyl CoA thiolase; Provisional
Probab=92.41 E-value=1.1 Score=46.79 Aligned_cols=125 Identities=14% Similarity=0.166 Sum_probs=66.5
Q ss_pred eechhHHhhhhCCCc-CeeeEcccceEEeccCCCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEEcccCCCCCccHHHHH
Q 012909 22 CVLQEALEVHDGVSK-GKYTVGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFL 100 (453)
Q Consensus 22 ~v~~~~l~~~~g~~~-~k~~~Gig~r~~av~~~~ed~~~la~~Aa~~aL~~agi~~~~Id~li~~t~s~~~~~~~~a~~l 100 (453)
.|..++-++.+|..+ .++ .|.+... . .+.... .-...|++++|+++|++|+|||.+.+. |.........
T Consensus 263 vL~s~e~A~~~g~~~~a~I-~g~~~~~--~-~p~~~~-~~~~~A~~~al~~AGl~~~DID~iei~-----dafa~~~l~~ 332 (400)
T PRK13359 263 LLASEAAARRHGLKPRARV-LGIATAG--V-EPRVMG-IGPAPATQKLLARLGMTLDQFDVIELN-----EAFASQGLAV 332 (400)
T ss_pred EEecHHHHHHCCCCccEEE-EEEEEec--C-CCCccc-hhHHHHHHHHHHHhCCCHHHcCcCccC-----cHhHHHHHHH
Confidence 445556666666555 333 3555432 1 222222 233689999999999999999999832 2222334445
Q ss_pred HHHhcccCCCCeeEEeeCC---------cChhHHHHHHHHHHHHHhCCCCCCeEEEEEeecc--ceeeeecC
Q 012909 101 MQIFEKYGNTDIEGVDSTN---------ACYGGTAALFNCVNWVESASWDGRYGLVVCTDTA--AVAMLIGP 161 (453)
Q Consensus 101 ~~~Lgl~G~~~~~~~dv~~---------aC~gg~~AL~~A~~~v~sg~~~~~~aLVv~~d~~--AvA~Ll~~ 161 (453)
.+.||+. .+...+.... +++|.. -+..+...|+.. ++++.|+..+--- +.||||++
T Consensus 333 ~e~lg~~--~~~~pvN~~GG~la~GHp~gasG~~-~v~e~~~qL~~~--~~~~g~~~~c~~gG~g~a~~ie~ 399 (400)
T PRK13359 333 LRELGLA--DDDARVNPNGGAIALGHPLGASGAR-LVTTALYQLERT--GGRFALCTMCIGVGQGIAIAIER 399 (400)
T ss_pred HHHcCCC--CCCCCEECCCchhhcCCchhHHHHH-HHHHHHHHHhhc--CCCeEEEEEcccCCceeEEEEEe
Confidence 6778862 2212223222 333333 333344444433 4567665533222 88888864
No 141
>TIGR02430 pcaF beta-ketoadipyl CoA thiolase. Members of this family are designated beta-ketoadipyl CoA thiolase, an enzyme that acts at the end of pathways for the degradation of protocatechuate (from benzoate and related compounds) and of phenylacetic acid.
Probab=92.29 E-value=0.82 Score=47.59 Aligned_cols=75 Identities=9% Similarity=0.087 Sum_probs=45.3
Q ss_pred eechhHHhhhhCCCc-CeeeEcccceEEeccCCCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEEcccCCCCCccHHHHH
Q 012909 22 CVLQEALEVHDGVSK-GKYTVGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFL 100 (453)
Q Consensus 22 ~v~~~~l~~~~g~~~-~k~~~Gig~r~~av~~~~ed~~~la~~Aa~~aL~~agi~~~~Id~li~~t~s~~~~~~~~a~~l 100 (453)
.|..++.++.+|..+ .++ .|.+.... .+..+.. -...|++++|+++|++|+|||.+.+. |.........
T Consensus 263 vl~s~e~A~~~g~~~~~~I-~g~~~~~~---~~~~~~~-~~~~a~~~al~~Agl~~~DID~~ei~-----D~f~~~~l~~ 332 (400)
T TIGR02430 263 LLASEEAVQRHGLTPRARI-LAAATAGV---EPRIMGI-GPVPATQKLLARAGLSIDQFDVIELN-----EAFAAQALAV 332 (400)
T ss_pred EEecHHHHHHCCCCccEEE-EEEEEecC---CCccccc-hHHHHHHHHHHHhCCCHHHCCCcccC-----cHHHHHHHHH
Confidence 445566666666543 344 35554321 2222222 23689999999999999999999842 2222334455
Q ss_pred HHHhcc
Q 012909 101 MQIFEK 106 (453)
Q Consensus 101 ~~~Lgl 106 (453)
.+.||+
T Consensus 333 ~e~lG~ 338 (400)
T TIGR02430 333 LRELGL 338 (400)
T ss_pred HHHcCC
Confidence 677887
No 142
>PRK09051 beta-ketothiolase; Provisional
Probab=91.68 E-value=1.5 Score=45.57 Aligned_cols=75 Identities=8% Similarity=0.043 Sum_probs=46.3
Q ss_pred eechhHHhhhhCCCcC-eeeEcccceEEeccCCCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEEcccCCCCCccHHHHH
Q 012909 22 CVLQEALEVHDGVSKG-KYTVGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFL 100 (453)
Q Consensus 22 ~v~~~~l~~~~g~~~~-k~~~Gig~r~~av~~~~ed~~~la~~Aa~~aL~~agi~~~~Id~li~~t~s~~~~~~~~a~~l 100 (453)
.|..++.++.+|.+|- ++ .|.+.... .+..+. .-...|++++|+++|++|+|||.+.+.- .........
T Consensus 259 vl~s~~~a~~~g~~~~~~I-~g~~~~~~---~~~~~~-~~~~~a~~~al~~agi~~~did~~ei~d-----~f~~~~~~~ 328 (394)
T PRK09051 259 VLAEADAAEARGLKPLARL-VGYAHAGV---DPEYMG-IGPVPATQKALERAGLTVADLDVIEANE-----AFAAQACAV 328 (394)
T ss_pred EEecHHHHHHCCCCccEEE-EEEEEecc---CCCccc-ccHHHHHHHHHHHcCCCHHHcCEEEecC-----ccHHHHHHH
Confidence 3455566666676653 44 34444321 222222 2336899999999999999999998732 222344455
Q ss_pred HHHhcc
Q 012909 101 MQIFEK 106 (453)
Q Consensus 101 ~~~Lgl 106 (453)
.+.||+
T Consensus 329 ~e~lg~ 334 (394)
T PRK09051 329 TRELGL 334 (394)
T ss_pred HHHhCC
Confidence 678886
No 143
>PRK06025 acetyl-CoA acetyltransferase; Provisional
Probab=91.65 E-value=0.99 Score=47.17 Aligned_cols=123 Identities=13% Similarity=0.138 Sum_probs=69.2
Q ss_pred eechhHHhhhhCCCc-CeeeEcccceEEeccCCCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEEcccCCCCCccHHHHH
Q 012909 22 CVLQEALEVHDGVSK-GKYTVGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFL 100 (453)
Q Consensus 22 ~v~~~~l~~~~g~~~-~k~~~Gig~r~~av~~~~ed~~~la~~Aa~~aL~~agi~~~~Id~li~~t~s~~~~~~~~a~~l 100 (453)
.|..++.++.+|..| .++ .|.+... . ++.. ...-...|++++|+++|++++|||.+.+.-. ........
T Consensus 282 VL~See~A~~lg~~p~a~I-~g~~~a~--~-~p~~-~~~~p~~Ai~~aL~~AGl~~~DID~~ei~ea-----Fa~~~l~~ 351 (417)
T PRK06025 282 LLASKAYAEKHGLKPRARI-VAMANMG--D-DPTL-MLNAPVPAAKKVLAKAGLTKDDIDLWEINEA-----FAVVAEKF 351 (417)
T ss_pred EEecHHHHHHcCCCCcEEE-EEEEEec--C-Cchh-hcccHHHHHHHHHHHcCCCHHHCcEEEEchH-----HHHHHHHH
Confidence 566677888888765 343 3444321 1 1111 0112257999999999999999999986422 22334456
Q ss_pred HHHhcccCCCCeeEEeeC---------CcChhHHHHHHHHHHHHHhCCCCCCeEEEE--EeeccceeeeecC
Q 012909 101 MQIFEKYGNTDIEGVDST---------NACYGGTAALFNCVNWVESASWDGRYGLVV--CTDTAAVAMLIGP 161 (453)
Q Consensus 101 ~~~Lgl~G~~~~~~~dv~---------~aC~gg~~AL~~A~~~v~sg~~~~~~aLVv--~~d~~AvA~Ll~~ 161 (453)
.+.||+ ... -+.+. .|++|....+.....+.+.+ +++.|+. ++-=.++|+||++
T Consensus 352 ~~~lg~--~~~--~vN~~GG~ia~GHp~GaTGa~~v~~ll~qL~~~g---~~~Gl~~~c~~GG~g~A~lle~ 416 (417)
T PRK06025 352 IRDLDL--DRD--KVNVNGGAIALGHPIGATGSILIGTVLDELERRG---LKRGLVTMCAAGGMAPAIIIER 416 (417)
T ss_pred HHHcCC--Chh--hccccCCHHhcCCchhHHHHHHHHHHHHHHHHhC---CCeEEEEEEeeccceeEEEEEe
Confidence 677775 211 11221 25555555555556665544 2555443 2233388888864
No 144
>PRK09050 beta-ketoadipyl CoA thiolase; Validated
Probab=91.61 E-value=1.3 Score=46.17 Aligned_cols=75 Identities=12% Similarity=0.126 Sum_probs=44.1
Q ss_pred eechhHHhhhhCCCcC-eeeEcccceEEeccCCCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEEcccCCCCCccHHHHH
Q 012909 22 CVLQEALEVHDGVSKG-KYTVGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFL 100 (453)
Q Consensus 22 ~v~~~~l~~~~g~~~~-k~~~Gig~r~~av~~~~ed~~~la~~Aa~~aL~~agi~~~~Id~li~~t~s~~~~~~~~a~~l 100 (453)
.|..++.++.+|..|- ++ .|.+.... .+..... -...|++++|+++|++|+|||.+.+.- .........
T Consensus 264 vl~s~~~A~~lg~~p~a~I-~g~~~~~~---~~~~~~~-~~~~a~~~al~~Agl~~~DId~~ei~D-----~f~~~~l~~ 333 (401)
T PRK09050 264 LLASEAAAKKHGLTPRARI-LGMATAGV---EPRIMGI-GPAPATRKLLARLGLTIDQFDVIELNE-----AFAAQGLAV 333 (401)
T ss_pred EEecHHHHHHCCCCccEEE-EEEEEecc---CCccccc-hHHHHHHHHHHHcCCCHHHCCccccCc-----HhHHHHHHH
Confidence 3444555665665443 33 35544321 2222222 236799999999999999999998432 222333445
Q ss_pred HHHhcc
Q 012909 101 MQIFEK 106 (453)
Q Consensus 101 ~~~Lgl 106 (453)
.+.||+
T Consensus 334 ~e~lg~ 339 (401)
T PRK09050 334 LRQLGL 339 (401)
T ss_pred HHHcCC
Confidence 677887
No 145
>PRK06205 acetyl-CoA acetyltransferase; Provisional
Probab=91.23 E-value=1.2 Score=46.39 Aligned_cols=126 Identities=13% Similarity=0.073 Sum_probs=67.1
Q ss_pred eechhHHhhhhCCCcCeeeEcccceEEeccCCCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEEcccCCCCCccHHHHHH
Q 012909 22 CVLQEALEVHDGVSKGKYTVGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLM 101 (453)
Q Consensus 22 ~v~~~~l~~~~g~~~~k~~~Gig~r~~av~~~~ed~~~la~~Aa~~aL~~agi~~~~Id~li~~t~s~~~~~~~~a~~l~ 101 (453)
.|..++.++.++.+|-.+..|.+.... .+.... .-...|++++|+++|++|+|||.+.+.-. .........
T Consensus 265 vl~se~~A~~~~~~p~~~i~g~~~~~~---~~~~~~-~~~~~a~~~al~~Agl~~~Did~~ei~d~-----f~~~~l~~~ 335 (404)
T PRK06205 265 LVTTEDKAEELGLRPLARLVSWAVAGV---EPSRMG-IGPVPATEKALARAGLTLDDIDLIELNEA-----FAAQVLAVL 335 (404)
T ss_pred EEecHHHHHHCCCCceEEEEEEEEecc---CCcccc-ccHHHHHHHHHHHcCCCHHHCCEeeeccH-----HHHHHHHHH
Confidence 455667777777666444346664421 111111 23368999999999999999999985332 222333445
Q ss_pred HHhcccCCCC-eeEEeeCC---------cChhHHHHHHHHHHHHHhCCCCCCeEEEEEeecc--ceeeeecC
Q 012909 102 QIFEKYGNTD-IEGVDSTN---------ACYGGTAALFNCVNWVESASWDGRYGLVVCTDTA--AVAMLIGP 161 (453)
Q Consensus 102 ~~Lgl~G~~~-~~~~dv~~---------aC~gg~~AL~~A~~~v~sg~~~~~~aLVv~~d~~--AvA~Ll~~ 161 (453)
+.||+. .. ..-+.+.. +|+| +.-+..+...|+.. .+++.|+-.+=-- +.|+||++
T Consensus 336 e~lg~~--~~~~~~vN~~GG~la~Ghp~gatG-~~~v~e~~~qL~~~--~~~~gl~~~c~~gg~g~a~~~e~ 402 (404)
T PRK06205 336 KEWGFG--ADDEERLNVNGSGISLGHPVGATG-GRILATLLRELQRR--QARYGLETMCIGGGQGLAAVFER 402 (404)
T ss_pred HHhCcC--cccCCCcCCCCCHHhhCCChhhhH-HHHHHHHHHHHHhc--CCCeEEEEEeccCChhhEEEEEe
Confidence 677762 10 00122222 2222 22333344444433 3467766533222 88888764
No 146
>cd00751 thiolase Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. They are found in prokaryotes and eukaryotes (cytosol, microbodies and mitochondria). There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.
Probab=91.08 E-value=1.4 Score=45.48 Aligned_cols=94 Identities=14% Similarity=0.189 Sum_probs=52.7
Q ss_pred HHHHHHHHHHHHcCCCcCCcCEEEEEcccCCCCCccHHHHHHHHhcccC-CCCeeEEee--CC-cChhHHHHHHHHHHHH
Q 012909 60 MSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYG-NTDIEGVDS--TN-ACYGGTAALFNCVNWV 135 (453)
Q Consensus 60 la~~Aa~~aL~~agi~~~~Id~li~~t~s~~~~~~~~a~~l~~~Lgl~G-~~~~~~~dv--~~-aC~gg~~AL~~A~~~v 135 (453)
-...|++++++++|++|+|||.+.+.- ..........+.||+.+ +-++.+--+ ++ ..++|+..+..+...+
T Consensus 286 ~~~~a~~~a~~~Agi~~~did~~e~~d-----~f~~~~~~~~e~lg~~~~pvn~~GG~l~~Gh~~gasG~~~~~e~~~qL 360 (386)
T cd00751 286 GPVPAIPKALKRAGLTLDDIDLIEINE-----AFAAQALACLKELGLDPEKVNVNGGAIALGHPLGASGARIVVTLLHEL 360 (386)
T ss_pred hHHHHHHHHHHHcCCCHHHcCEEEeec-----hhHHHHHHHHHHhCCChhhcCCCcchHhhCccHHHHHHHHHHHHHHHH
Confidence 346899999999999999999998642 12223334456777621 111111111 11 1122344444455555
Q ss_pred HhCCCCCCeEEEEEeecc--ceeeeec
Q 012909 136 ESASWDGRYGLVVCTDTA--AVAMLIG 160 (453)
Q Consensus 136 ~sg~~~~~~aLVv~~d~~--AvA~Ll~ 160 (453)
+.. .+++.|+..+--- +++|||+
T Consensus 361 ~g~--~~~~gl~~~~~~gg~g~~~~ie 385 (386)
T cd00751 361 KRR--GGRYGLATMCIGGGQGAAMVIE 385 (386)
T ss_pred Hhc--CCCEEEEEEcccccceEEEEEE
Confidence 543 4577777654443 7788875
No 147
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=91.02 E-value=0.66 Score=53.28 Aligned_cols=92 Identities=20% Similarity=0.231 Sum_probs=58.3
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCE----EEEE---cccCCCC--Cc-cHHHH-----HHHHhcccCCCCeeEEe-----
Q 012909 57 VISMSLTVVTSLLEKYKIDPTQIGR----LEVG---SETVIDK--SK-SIKTF-----LMQIFEKYGNTDIEGVD----- 116 (453)
Q Consensus 57 ~~~la~~Aa~~aL~~agi~~~~Id~----li~~---t~s~~~~--~~-~~a~~-----l~~~Lgl~G~~~~~~~d----- 116 (453)
-+-|-.+|..+++-++||+|.++.. ++++ ++|.... .| ..-.+ +-..+. ++=..+||
T Consensus 87 q~RlLLE~t~EAivDaGiNP~~LRGs~tGv~vg~s~seTs~~~~~dp~t~~Gy~mtgc~raMfa---NRiSytFDfqGPS 163 (2376)
T KOG1202|consen 87 QLRLLLEATWEAIVDAGINPDDLRGSRTGVFVGVSGSETSGALSQDPDTVNGYSMTGCVRAMFA---NRISYTFDFQGPS 163 (2376)
T ss_pred HHHHHHHHHHHHHHhCCCChhhcCcccceeEEeecCccccccccCCCccccceeecccHHHHhh---cceeEEEeccCCc
Confidence 4789999999999999999988752 3322 2222111 11 11111 111111 12223444
Q ss_pred --eCCcChhHHHHHHHHHHHHHhCCCCCCeEEEEEeecc
Q 012909 117 --STNACYGGTAALFNCVNWVESASWDGRYGLVVCTDTA 153 (453)
Q Consensus 117 --v~~aC~gg~~AL~~A~~~v~sg~~~~~~aLVv~~d~~ 153 (453)
+..+|++...||+.|.+-+++|+. ..+||-++...
T Consensus 164 ~s~DtacsSsl~al~~a~~~~r~gqc--d~AiVaG~~li 200 (2376)
T KOG1202|consen 164 FSVDTACSSSLMALQNAFQDIRSGQC--DAAIVAGANLI 200 (2376)
T ss_pred hhhhhhhHHHHHHHHHHHHhhhccCC--chhhhcccceE
Confidence 456999999999999999999977 78888766643
No 148
>TIGR01930 AcCoA-C-Actrans acetyl-CoA acetyltransferases. This model represents a large family of enzymes which catalyze the thiolysis of a linear fatty acid CoA (or acetoacetyl-CoA) using a second CoA molecule to produce acetyl-CoA and a CoA-ester product two carbons shorter (or, alternatively, the condensation of two molecules of acetyl-CoA to produce acetoacetyl-CoA and CoA). This enzyme is also known as "thiolase", "3-ketoacyl-CoA thiolase", "beta-ketothiolase" and "Fatty oxidation complex beta subunit". When catalyzing the degradative reaction on fatty acids the corresponding EC number is 2.3.1.16. The condensation reaction corresponds to 2.3.1.9. Note that the enzymes which catalyze the condensation are generally not involved in fatty acid biosynthesis, which is carried out by a decarboxylating condensation of acetyl and malonyl esters of acyl carrier proteins. Rather, this activity may produce acetoacetyl-CoA for pathways such as IPP biosynthesis in the absence of sufficient fatt
Probab=90.44 E-value=1.8 Score=44.75 Aligned_cols=127 Identities=12% Similarity=0.121 Sum_probs=66.1
Q ss_pred eechhHHhhhhCCCcCeeeEcccceEEeccCCCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEEcccCCCCCccHHHHHH
Q 012909 22 CVLQEALEVHDGVSKGKYTVGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLM 101 (453)
Q Consensus 22 ~v~~~~l~~~~g~~~~k~~~Gig~r~~av~~~~ed~~~la~~Aa~~aL~~agi~~~~Id~li~~t~s~~~~~~~~a~~l~ 101 (453)
.|..++.++.++.+|--+..|.+.... .++.. ..-...|++++++++|++|+|||.+.+..... .......
T Consensus 253 vl~s~~~A~~~~~~~~~~i~g~g~~~~---~~~~~-~~~~~~a~~~a~~~Agi~~~did~~e~~d~fa-----~~~~~~~ 323 (386)
T TIGR01930 253 LLMSEERAKELGLTPLARIVSFAVAGV---DPEIM-GLGPVPAIPKALKKAGLSISDIDLFEINEAFA-----AQVLACI 323 (386)
T ss_pred EEecHHHHHHCCCCccEEEEEEEEecC---CCccc-cccHHHHHHHHHHHcCCCHHHCCeeehcchhH-----HHHHHHH
Confidence 445566666666655322345555432 22212 22335899999999999999999996643221 2222334
Q ss_pred HHhcccCCC--CeeEEeeC--C-cChhHHHHHHHHHHHHHhCCCCCCeEEEEEeecc--ceeeeec
Q 012909 102 QIFEKYGNT--DIEGVDST--N-ACYGGTAALFNCVNWVESASWDGRYGLVVCTDTA--AVAMLIG 160 (453)
Q Consensus 102 ~~Lgl~G~~--~~~~~dv~--~-aC~gg~~AL~~A~~~v~sg~~~~~~aLVv~~d~~--AvA~Ll~ 160 (453)
+.||+ |.. ++.+--+. + ..++|+..+..+...|+.. +.+++|+-+.-.- ++||||+
T Consensus 324 e~lG~-~~~pvn~~GG~l~~Ghp~gasG~~~~~e~~~qL~g~--~~~~gl~~~~~~gG~g~~~~~e 386 (386)
T TIGR01930 324 KELGL-DLEKVNVNGGAIALGHPLGASGARIVTTLLHELKRR--GGRYGLATICIGGGQGIAVILE 386 (386)
T ss_pred HHhCC-ChhhcCCCCChHhhCCcHHHHHHHHHHHHHHHHHhc--CCCEEEEEEeccCCceEEEEeC
Confidence 66775 111 11111111 1 1222444444555555543 3477777544222 7777764
No 149
>PRK06816 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=90.09 E-value=2.1 Score=44.09 Aligned_cols=85 Identities=12% Similarity=0.126 Sum_probs=53.9
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCEEEEEcccCCCCCccHHHHHHHHh-----cccCCCC-ee-EEe-eC-CcChhHHHHHH
Q 012909 59 SMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIF-----EKYGNTD-IE-GVD-ST-NACYGGTAALF 129 (453)
Q Consensus 59 ~la~~Aa~~aL~~agi~~~~Id~li~~t~s~~~~~~~~a~~l~~~L-----gl~G~~~-~~-~~d-v~-~aC~gg~~AL~ 129 (453)
.....+.+++|+++|+.++|||.++...- .+..-..+.+.| |+ ++. +. .++ ++ .+|++...+|.
T Consensus 272 ~~~~~~i~~~L~~~gl~~~DId~~v~Hq~-----n~~~~~~v~~~l~~~~~gl--~~~k~~~~~~~~GNt~sAsipi~L~ 344 (378)
T PRK06816 272 VYTIKPLLELVDKRNLDPDDIDYFLPHYS-----SEYFREKIVELLAKAGFMI--PEEKWFTNLATVGNTGSASIYIMLD 344 (378)
T ss_pred HHHHHHHHHHHHHcCCChhhCCEEeeCcc-----cHHHHHHHHHHHHhccCCC--ChhheEEeccccccccchHHHHHHH
Confidence 44578889999999999999999986442 233444566666 66 322 22 222 22 35555556665
Q ss_pred HHHHHHHhCC-CCCCeEEEEEeecc
Q 012909 130 NCVNWVESAS-WDGRYGLVVCTDTA 153 (453)
Q Consensus 130 ~A~~~v~sg~-~~~~~aLVv~~d~~ 153 (453)
.+ ++.|. .+|+++++++.+-.
T Consensus 345 ~a---~~~g~~~~Gd~vl~~~~~s~ 366 (378)
T PRK06816 345 EL---LNSGRLKPGQKILCFVPESG 366 (378)
T ss_pred HH---HHcCCCCCCCEEEEEEeccc
Confidence 54 34443 27789998877765
No 150
>PRK09052 acetyl-CoA acetyltransferase; Provisional
Probab=89.78 E-value=1.7 Score=45.16 Aligned_cols=75 Identities=7% Similarity=0.076 Sum_probs=45.1
Q ss_pred eechhHHhhhhCCCcC-eeeEcccceEEeccCCCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEEcccCCCCCccHHHHH
Q 012909 22 CVLQEALEVHDGVSKG-KYTVGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFL 100 (453)
Q Consensus 22 ~v~~~~l~~~~g~~~~-k~~~Gig~r~~av~~~~ed~~~la~~Aa~~aL~~agi~~~~Id~li~~t~s~~~~~~~~a~~l 100 (453)
.|..++.++.+|..+- ++ .|.+.... .+..... -...|++++|+++|++|+|||.+.+. |.........
T Consensus 264 vl~se~~a~~~g~~~~a~i-~g~~~~~~---~~~~~~~-~~~~A~~~al~~Agi~~~did~~ei~-----D~f~~~~l~~ 333 (399)
T PRK09052 264 ILVSEKALKQFNLTPLARF-VSFAVAGV---PPEIMGI-GPIEAIPAALKQAGLKQDDLDWIELN-----EAFAAQSLAV 333 (399)
T ss_pred EEecHHHHHHCCCCeeEEE-EEEEEecc---CCCccch-hHHHHHHHHHHHcCCCHHHcCEEEeC-----cHHHHHHHHH
Confidence 3445566666665554 33 35554321 2222222 44789999999999999999999842 2222333445
Q ss_pred HHHhcc
Q 012909 101 MQIFEK 106 (453)
Q Consensus 101 ~~~Lgl 106 (453)
.+.||+
T Consensus 334 ~e~lg~ 339 (399)
T PRK09052 334 IRDLGL 339 (399)
T ss_pred HHHhCC
Confidence 577886
No 151
>PRK12879 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=89.74 E-value=1.5 Score=43.77 Aligned_cols=92 Identities=13% Similarity=-0.002 Sum_probs=55.6
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEEEcccCCCCCccHHHHHHHHhcccCCCCeeEEeeC-CcChhHHHHHHHHHHHHHhCC
Q 012909 61 SLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDST-NACYGGTAALFNCVNWVESAS 139 (453)
Q Consensus 61 a~~Aa~~aL~~agi~~~~Id~li~~t~s~~~~~~~~a~~l~~~Lgl~G~~~~~~~dv~-~aC~gg~~AL~~A~~~v~sg~ 139 (453)
..++.+++|+++|++++|||.+++..- .+..-..+.+.||+ +.......+. .|-.+...-+..-..+++.|.
T Consensus 227 ~~~~i~~~L~~~g~~~~did~~~~h~~-----~~~~~~~~~~~lg~--~~~~~~~~~~~~Gn~~sas~~~~L~~~~~~g~ 299 (325)
T PRK12879 227 MPKGARQVLEKAGLTKDDIDWVIPHQA-----NLRIIESLCEKLGI--PMEKTLVSVEYYGNTSAATIPLALDLALEQGK 299 (325)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEECCC-----CHHHHHHHHHHcCC--CHHHhhhhHhhhCchHHHHHHHHHHHHHHcCC
Confidence 346788999999999999999998642 34455678899998 4322211222 221222222222334456553
Q ss_pred -CCCCeEEEEEeecc--ceeeee
Q 012909 140 -WDGRYGLVVCTDTA--AVAMLI 159 (453)
Q Consensus 140 -~~~~~aLVv~~d~~--AvA~Ll 159 (453)
.+|+++|+++.-.- ..|+|+
T Consensus 300 ~~~Gd~vll~~~G~G~~~~~~l~ 322 (325)
T PRK12879 300 IKPGDTLLLYGFGAGLTWAALLV 322 (325)
T ss_pred CCCCCEEEEEEEchhhhhEEEEE
Confidence 26789998876443 555555
No 152
>PRK08242 acetyl-CoA acetyltransferase; Validated
Probab=89.73 E-value=2.1 Score=44.58 Aligned_cols=127 Identities=12% Similarity=0.062 Sum_probs=68.3
Q ss_pred eechhHHhhhhCCCc-CeeeEcccceEEeccCCCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEEcccCCCCCccHHHHH
Q 012909 22 CVLQEALEVHDGVSK-GKYTVGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFL 100 (453)
Q Consensus 22 ~v~~~~l~~~~g~~~-~k~~~Gig~r~~av~~~~ed~~~la~~Aa~~aL~~agi~~~~Id~li~~t~s~~~~~~~~a~~l 100 (453)
.|..++.++.+|..| .++ .|.+... . .+... ..-...|++++|+++|++|+|||.+.+. +.........
T Consensus 267 vl~s~e~A~~~g~~p~a~I-~g~~~~~--~-~~~~~-~~~~~~a~~~al~~AGl~~~DID~~ei~-----daFa~~~l~~ 336 (402)
T PRK08242 267 LIGSEEAGKALGLKPRARI-VATATIG--S-DPTIM-LTGPVPATRKALAKAGLTVDDIDLFELN-----EAFASVVLRF 336 (402)
T ss_pred EEecHHHHHHcCCCCcEEE-EEEEEec--C-Cchhh-cccHHHHHHHHHHHcCCCHHHCCEEEec-----chhhHHHHHH
Confidence 556677888888754 444 3444331 1 11111 1112579999999999999999999863 2222334455
Q ss_pred HHHhcccCC-CCee----EEeeCCcChhHHHHHHHHHHHHHhCCCCCCeEEEEEeec--cceeeeecC
Q 012909 101 MQIFEKYGN-TDIE----GVDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDT--AAVAMLIGP 161 (453)
Q Consensus 101 ~~~Lgl~G~-~~~~----~~dv~~aC~gg~~AL~~A~~~v~sg~~~~~~aLVv~~d~--~AvA~Ll~~ 161 (453)
.+.||+... -++. ++---.|++|....+..+..+-+ . ++++.|+..+-- .++||||++
T Consensus 337 ~e~lG~~~~~vN~~GG~la~GHP~GAsG~~~~~~l~~~L~~-~--~~~~g~~~~c~ggG~g~a~~~e~ 401 (402)
T PRK08242 337 MQALDIPHDKVNVNGGAIAMGHPLGATGAMILGTVLDELER-R--GKRTALITLCVGGGMGIATIIER 401 (402)
T ss_pred HHHhCCCCcCCCcCCCHHhcCCcHHHHHHHHHHHHHHHHHh-c--CCCeEEEEEcccCCceeEEEEEe
Confidence 678886210 0111 11111244444444444444433 2 346665543222 288888864
No 153
>PRK05790 putative acyltransferase; Provisional
Probab=89.69 E-value=2.7 Score=43.52 Aligned_cols=127 Identities=13% Similarity=0.114 Sum_probs=65.9
Q ss_pred eechhHHhhhhCCCcC-eeeEcccceEEeccCCCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEEcccCCCCCccHHHHH
Q 012909 22 CVLQEALEVHDGVSKG-KYTVGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFL 100 (453)
Q Consensus 22 ~v~~~~l~~~~g~~~~-k~~~Gig~r~~av~~~~ed~~~la~~Aa~~aL~~agi~~~~Id~li~~t~s~~~~~~~~a~~l 100 (453)
.|..++.++.++.++- ++ .|.+.... .+..... -...|++++++++|++|+|||.+.+.- .........
T Consensus 258 vl~s~e~a~~~~~~~~~~I-~g~~~~~~---~~~~~~~-~~~~a~~~a~~~Agi~~~did~~e~~d-----~f~~~~l~~ 327 (393)
T PRK05790 258 VVMSEAKAKELGLTPLARI-VSYAVAGV---DPAIMGI-GPVPAIRKALEKAGWSLADLDLIEINE-----AFAAQALAV 327 (393)
T ss_pred EEecHHHHHHCCCCeeEEE-EEEEEccC---CCCccch-hHHHHHHHHHHHcCCCHHHCCEEEeCc-----HHHHHHHHH
Confidence 3445555555665554 33 45554421 2222222 245799999999999999999998532 122233345
Q ss_pred HHHhcccC-CCCeeEEee--C--CcChhHHHHHHHHHHHHHhCCCCCCeEEEEEeecc--ceeeeecC
Q 012909 101 MQIFEKYG-NTDIEGVDS--T--NACYGGTAALFNCVNWVESASWDGRYGLVVCTDTA--AVAMLIGP 161 (453)
Q Consensus 101 ~~~Lgl~G-~~~~~~~dv--~--~aC~gg~~AL~~A~~~v~sg~~~~~~aLVv~~d~~--AvA~Ll~~ 161 (453)
.+.||+.. +-++.+--+ + .+++| ..-+..+...|+.. +++++|+-..--. ++|+||+.
T Consensus 328 ~e~lg~~~~pvN~~GG~l~~Ghp~gatG-~~~~~e~~~qL~~~--~~~~gl~~~~~~~g~g~~~~~e~ 392 (393)
T PRK05790 328 EKELGLDPEKVNVNGGAIALGHPIGASG-ARILVTLLHEMKRR--GAKKGLATLCIGGGQGVALIVER 392 (393)
T ss_pred HHHhCCChhhcCCCcchhhhCcchhhhH-HHHHHHHHHHHHhc--CCCeEEEEEeccCCceeEEEEEc
Confidence 56777510 111111111 1 23333 33333344445443 4577766543222 77888764
No 154
>PF02803 Thiolase_C: Thiolase, C-terminal domain; InterPro: IPR020617 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2.3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 2WUA_B 4E1L_B 3SVK_A 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2IB8_B 2IBU_A 2IB9_C ....
Probab=89.51 E-value=2.6 Score=36.41 Aligned_cols=93 Identities=15% Similarity=0.190 Sum_probs=52.9
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEEEcccCCCCCccHHHHHHHHhcccC---CCCeeEEeeC--CcChhHHHHHHHHHHHH
Q 012909 61 SLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYG---NTDIEGVDST--NACYGGTAALFNCVNWV 135 (453)
Q Consensus 61 a~~Aa~~aL~~agi~~~~Id~li~~t~s~~~~~~~~a~~l~~~Lgl~G---~~~~~~~dv~--~aC~gg~~AL~~A~~~v 135 (453)
.+.|++++|+++|++++|||.+.+.-. .-...-...+.||+.. |++=-.+-.. .+|+|.-..+..+..+-
T Consensus 24 p~~A~~~al~~ag~~~~did~~Ei~Ea-----FA~~~l~~~~~lg~~~~~vN~~GG~la~GHP~gasG~r~~~~l~~~L~ 98 (123)
T PF02803_consen 24 PVPAARKALERAGLTPDDIDVIEINEA-----FAAQVLAFLEALGLDPEKVNPNGGALALGHPLGASGARLVVELAHQLR 98 (123)
T ss_dssp HHHHHHHHHHHHT--GGGESEEEE--S-----BHHHHHHHHHHHTTGGGGBSTT--HHHH-BHTTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCccccchhhccch-----hhhHHHHhhccccccccccCcccccccccccccccccchhhhhHHHHH
Confidence 468999999999999999999987532 2234455667777610 0110011112 36766666666666655
Q ss_pred HhCCCCCCeEEEEEeecc--ceeeeecC
Q 012909 136 ESASWDGRYGLVVCTDTA--AVAMLIGP 161 (453)
Q Consensus 136 ~sg~~~~~~aLVv~~d~~--AvA~Ll~~ 161 (453)
..+ +++.|+-.+--- +.|+||++
T Consensus 99 ~~~---~~~gla~~~~ggG~g~a~ller 123 (123)
T PF02803_consen 99 RRG---GRYGLAAICAGGGQGSAVLLER 123 (123)
T ss_dssp HHT---TSEEEEEEEETTTEEEEEEEEE
T ss_pred Hhc---hhhhhHHhcccceeeEEEEEEC
Confidence 443 366655443332 77888753
No 155
>PRK07661 acetyl-CoA acetyltransferase; Provisional
Probab=89.48 E-value=1.8 Score=44.85 Aligned_cols=127 Identities=12% Similarity=0.110 Sum_probs=66.2
Q ss_pred echhHHhhhhCCCcCeeeEcccceEEeccCCCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEEcccCCCCCccHHHHHHH
Q 012909 23 VLQEALEVHDGVSKGKYTVGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQ 102 (453)
Q Consensus 23 v~~~~l~~~~g~~~~k~~~Gig~r~~av~~~~ed~~~la~~Aa~~aL~~agi~~~~Id~li~~t~s~~~~~~~~a~~l~~ 102 (453)
+..++.++.+|..|--+..|.+.... .+..... -...|++++|+++|++|+|||.+.+.- ..........+
T Consensus 257 l~s~~~A~~~g~~~~~~i~g~~~~~~---~~~~~~~-~~~~a~~~al~~agl~~~did~~ei~d-----~f~~~~l~~~e 327 (391)
T PRK07661 257 LMDREKAESDGLKPLAKFRSFAVAGV---PPEVMGI-GPIAAIPKALKLAGLELSDIGLFELNE-----AFASQSIQVIR 327 (391)
T ss_pred EecHHHHHHCCCCceEEEEEEEEecC---CCcccch-HHHHHHHHHHHHcCCCHHHCCEEEeCC-----HHHHHHHHHHH
Confidence 44556666666655522345554432 1221222 346899999999999999999998532 12222333345
Q ss_pred HhcccC-CCCeeEEe--eC--CcChhHHHHHHHHHHHHHhCCCCCCeEEEEEee--ccceeeeecC
Q 012909 103 IFEKYG-NTDIEGVD--ST--NACYGGTAALFNCVNWVESASWDGRYGLVVCTD--TAAVAMLIGP 161 (453)
Q Consensus 103 ~Lgl~G-~~~~~~~d--v~--~aC~gg~~AL~~A~~~v~sg~~~~~~aLVv~~d--~~AvA~Ll~~ 161 (453)
.||+.. +-+..+-- .+ .+++|.-..+..+.++-+. ++++.|+..+- -.+.|+||+.
T Consensus 328 ~lg~~~~~vN~~GG~~a~Ghp~gasG~~~~~el~~qL~~~---~~~~g~~~~c~~gg~g~a~~~e~ 390 (391)
T PRK07661 328 ELGLDEEKVNVNGGAIALGHPLGCTGAKLTLSLIHEMKRR---NEQFGIVTMCIGGGMGAAGVFEL 390 (391)
T ss_pred HcCCCCCCCCCCCChHHhCCcHHHHHHHHHHHHHHHHHhc---CCCeEEEEEccccChhhEEEEEe
Confidence 777611 01111111 11 2555544445555554443 34666554322 2277888753
No 156
>PRK06366 acetyl-CoA acetyltransferase; Provisional
Probab=89.46 E-value=2 Score=44.47 Aligned_cols=127 Identities=10% Similarity=0.049 Sum_probs=72.5
Q ss_pred eechhHHhhhhCCCcC-eeeEcccceEEeccCCCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEEcccCCCCCccHHHHH
Q 012909 22 CVLQEALEVHDGVSKG-KYTVGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFL 100 (453)
Q Consensus 22 ~v~~~~l~~~~g~~~~-k~~~Gig~r~~av~~~~ed~~~la~~Aa~~aL~~agi~~~~Id~li~~t~s~~~~~~~~a~~l 100 (453)
.|..++.++..+.+|- ++ .|.++... .+ ++.....+.|++++++++|++|+|||.+.+.-. .......-
T Consensus 252 vl~See~A~~l~~~pv~~I-~g~~~~~~---~~-~~~~~~~~~A~~~al~~Agl~~~DiDv~Ei~da-----Fa~~~l~~ 321 (388)
T PRK06366 252 VMASEKAINEYGLKPIARI-TGYESASL---DP-LDFVEAPIPATRKLLEKQNKSIDYYDLVEHNEA-----FSIASIIV 321 (388)
T ss_pred EEecHHHHHHcCCCcCEEE-EEEEEEec---CH-HHhcccHHHHHHHHHHHcCCCHHHcceeeccch-----hHHHHHHH
Confidence 4566677777776665 54 35554431 11 223333478999999999999999999987432 22334455
Q ss_pred HHHhcccCC---C--CeeEEeeCCcChhHHHHHHHHHHHHHhCCCCCCeEEEEEeecc--ceeeeecC
Q 012909 101 MQIFEKYGN---T--DIEGVDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDTA--AVAMLIGP 161 (453)
Q Consensus 101 ~~~Lgl~G~---~--~~~~~dv~~aC~gg~~AL~~A~~~v~sg~~~~~~aLVv~~d~~--AvA~Ll~~ 161 (453)
.+.||+.|. + ...++-.--||.|.-..+..+.++-..| +++.|+..+--- +.|+||+.
T Consensus 322 le~lgl~g~~vN~~GG~la~GHP~GatG~~~~~~l~~qL~~~~---~~~g~~~~c~~gg~g~a~~~e~ 386 (388)
T PRK06366 322 RDQLKIDNERFNVNGGAVAIGHPIGNSGSRIIVTLINALKTRH---MKTGLATLCHGGGGAHTLTLEM 386 (388)
T ss_pred HHHhCCCCCccCCCCchhhhCCCcCCCHHHHHHHHHHHHHhcC---CCeEEEEEecccChhhEEEEEe
Confidence 667776221 0 0111112237777666666666655433 466655433222 77777764
No 157
>PRK06690 acetyl-CoA acetyltransferase; Provisional
Probab=88.87 E-value=4.1 Score=41.84 Aligned_cols=125 Identities=12% Similarity=0.054 Sum_probs=66.7
Q ss_pred eechhHHhhhhCCCcC-eeeEcccceEEeccCCCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEEcccCCCCCccHHHHH
Q 012909 22 CVLQEALEVHDGVSKG-KYTVGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFL 100 (453)
Q Consensus 22 ~v~~~~l~~~~g~~~~-k~~~Gig~r~~av~~~~ed~~~la~~Aa~~aL~~agi~~~~Id~li~~t~s~~~~~~~~a~~l 100 (453)
.|..++.++.++..|- ++. |.+... . .+... ..-...|++++|+++|++|+|||.+.+.- .........
T Consensus 225 vl~s~e~A~~lg~~p~~~i~-~~~~~~--~-~~~~~-~~~~~~a~~~al~~Agl~~~Did~~ei~e-----afa~~~~~~ 294 (361)
T PRK06690 225 LVMEEGQARKLGYKPVLRFV-RSAVVG--V-DPNLP-GTGPIFAVNKLLNEMNMKVEDIDYFEINE-----AFASKVVAC 294 (361)
T ss_pred EEecHHHHHHcCCCceEEEE-EEEEec--c-Ccccc-hhHHHHHHHHHHHHcCCCHHHcCEeeecc-----hhHHHHHHH
Confidence 3445566666665553 332 222211 1 11111 23457899999999999999999997732 222334455
Q ss_pred HHHhcccCCCCeeEE-------eeCCcChhHHHHHHHHHHHHHhCCCCCCeEEEEEeec--cceeeeecC
Q 012909 101 MQIFEKYGNTDIEGV-------DSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDT--AAVAMLIGP 161 (453)
Q Consensus 101 ~~~Lgl~G~~~~~~~-------dv~~aC~gg~~AL~~A~~~v~sg~~~~~~aLVv~~d~--~AvA~Ll~~ 161 (453)
.+.||+ ...-..+ --..|+.|.........++-+.| +++.|+..+=- .++|+||++
T Consensus 295 ~e~lgl--~~~~vn~~GG~la~Ghp~GatG~~~~~~~~~ql~~~~---~~~g~~~~c~~gG~g~a~~~e~ 359 (361)
T PRK06690 295 AKELQI--PYEKLNVNGGAIALGHPYGASGAMLVTRLFYQAKRED---MKYGIATLGIGGGIGLALLFEK 359 (361)
T ss_pred HHhcCC--CchhcccCCcHHhccCchhhhHHHHHHHHHHHHHHhC---CCEEEEEEcccCcceeEEEEEe
Confidence 677776 2210011 11235665555555555554433 35655442211 278888764
No 158
>PRK06840 hypothetical protein; Validated
Probab=88.75 E-value=2.3 Score=42.92 Aligned_cols=94 Identities=19% Similarity=0.149 Sum_probs=56.7
Q ss_pred HHHHHHHHHHHHcCCCcCCcCEEEEEcccCCCCCccHHHHHHHHhcccCCC-CeeEEeeCCcChhHHHHHHHHHHHHHhC
Q 012909 60 MSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNT-DIEGVDSTNACYGGTAALFNCVNWVESA 138 (453)
Q Consensus 60 la~~Aa~~aL~~agi~~~~Id~li~~t~s~~~~~~~~a~~l~~~Lgl~G~~-~~~~~dv~~aC~gg~~AL~~A~~~v~sg 138 (453)
...++.+++|+++|++++|||.+++... .+.+-..+++.||+ +. ....++ ..|-.+...-+.+-..+++++
T Consensus 238 ~~~~~i~~~L~~~gl~~~did~~~~h~~-----~~~~~~~~~~~Lgl--~~~~~~~~~-~~Gn~~sas~~~~L~~~~~~~ 309 (339)
T PRK06840 238 NFLKVIREALRKSGYTPKDIDYLAILHM-----KRSAHIALLEGLGL--TEEQAIYLD-EYGHLGQLDQILSLHLALEQG 309 (339)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEECCc-----CHHHHHHHHHHcCC--CHHHeEeHH-hccchhhhhHHHHHHHHHHcC
Confidence 3457889999999999999999886432 23344567899998 43 222222 122222222233333445555
Q ss_pred C-CCCCeEEEEEeecc--ceeeeecC
Q 012909 139 S-WDGRYGLVVCTDTA--AVAMLIGP 161 (453)
Q Consensus 139 ~-~~~~~aLVv~~d~~--AvA~Ll~~ 161 (453)
. .+|+++|+++.-.- ..++|+.-
T Consensus 310 ~~~~Gd~ill~~~G~G~s~~~~~l~~ 335 (339)
T PRK06840 310 KLKDGDLVVLVSAGTGYTWAATVIRW 335 (339)
T ss_pred CCCCCCEEEEEEEehhhheeEEEEEe
Confidence 3 27889998876543 55666644
No 159
>PRK05656 acetyl-CoA acetyltransferase; Provisional
Probab=87.45 E-value=3.3 Score=42.96 Aligned_cols=128 Identities=12% Similarity=0.039 Sum_probs=64.5
Q ss_pred eechhHHhhhhCCCcC-eeeEcccceEEeccCCCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEEcccCCCCCccHHHHH
Q 012909 22 CVLQEALEVHDGVSKG-KYTVGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFL 100 (453)
Q Consensus 22 ~v~~~~l~~~~g~~~~-k~~~Gig~r~~av~~~~ed~~~la~~Aa~~aL~~agi~~~~Id~li~~t~s~~~~~~~~a~~l 100 (453)
.|..++-++.+|.++- ++ .|.+... . .+... ..-...|++++|+++|++|+|||.+.+.- .........
T Consensus 258 vl~s~~~A~~~g~~~~a~i-~g~~~~~--~-~~~~~-~~~~~~a~~~al~~agl~~~dId~~e~~d-----~f~~~~~~~ 327 (393)
T PRK05656 258 LLMSAAKAKALGLPVLAKI-AAYANAG--V-DPAIM-GIGPVSATRRCLDKAGWSLAELDLIEANE-----AFAAQSLAV 327 (393)
T ss_pred EEecHHHHHHCCCCeeEEE-EEEEEec--C-CCccc-chhHHHHHHHHHHHcCCCHHHCCEEEecC-----ccHHHHHHH
Confidence 3444556666665533 33 3554432 1 22211 11235899999999999999999998732 222334445
Q ss_pred HHHhcccC-CCCeeEEee--C--CcChhHHHHHHHHHHHHHhCCCCCCeEEEEEeecc--ceeeeecCC
Q 012909 101 MQIFEKYG-NTDIEGVDS--T--NACYGGTAALFNCVNWVESASWDGRYGLVVCTDTA--AVAMLIGPD 162 (453)
Q Consensus 101 ~~~Lgl~G-~~~~~~~dv--~--~aC~gg~~AL~~A~~~v~sg~~~~~~aLVv~~d~~--AvA~Ll~~~ 162 (453)
.+.||+.. +-++.+--+ + .+++|.-..+..+..+-.. ++++.|+-.+--- +.|+||+.+
T Consensus 328 ~e~lg~~~~~vn~~Gg~~a~GHp~gAsG~~~~~~l~~~l~~~---~~~~gl~~~c~~gG~g~a~~~e~~ 393 (393)
T PRK05656 328 GKELGWDAAKVNVNGGAIALGHPIGASGCRVLVTLLHEMIRR---DAKKGLATLCIGGGQGVALAIERD 393 (393)
T ss_pred HHHhCCCCccCCcCCCHHHhCccHHHHHHHHHHHHHHHHHHc---CCCEEEEEEcccCcceEEEEEecC
Confidence 67777511 011111111 1 1333333333333333222 3466665433222 888888754
No 160
>cd00327 cond_enzymes Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction. Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products.
Probab=87.38 E-value=7.6 Score=36.92 Aligned_cols=91 Identities=13% Similarity=-0.008 Sum_probs=51.3
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCEEEEEcccCCCCCccHHHHHHHHhccc--CCC----CeeEEeeC-CcChhHHHHHH
Q 012909 57 VISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKY--GNT----DIEGVDST-NACYGGTAALF 129 (453)
Q Consensus 57 ~~~la~~Aa~~aL~~agi~~~~Id~li~~t~s~~~~~~~~a~~l~~~Lgl~--G~~----~~~~~dv~-~aC~gg~~AL~ 129 (453)
......++.+++|+++|++++|||.++.......... .+...+++. +.. ....-.++ ..|+++...|.
T Consensus 143 ~~~~~~~~i~~~l~~ag~~~~did~~~~h~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~as~~~~l~ 217 (254)
T cd00327 143 SGEGLARAARKALEGAGLTPSDIDYVEAHGTGTPIGD-----AVELALGLDPDGVRSPAVSATLIMTGHPLGAAGLAILD 217 (254)
T ss_pred ChHHHHHHHHHHHHHcCCCHHHCCEEEccCCcCcccc-----HHHHHHHHHHhCCCCCceeccccccccchHHHHHHHHH
Confidence 3456678899999999999999999886543322211 122333321 001 11112333 35556666666
Q ss_pred HHHHHHHhC-----CCCCCeEEEEEeec
Q 012909 130 NCVNWVESA-----SWDGRYGLVVCTDT 152 (453)
Q Consensus 130 ~A~~~v~sg-----~~~~~~aLVv~~d~ 152 (453)
.+...++.+ ..+++++|+.+.-.
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~l~~~~g~ 245 (254)
T cd00327 218 ELLLMLEHEFIPPTPREPRTVLLLGFGL 245 (254)
T ss_pred HHHHHHhCCCcCCCCCCcCEEEEeeEcC
Confidence 666555543 11357777776544
No 161
>TIGR00748 HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase, putative. Thus, although there is no experimental evidence supporting this name, the bioinformatics-based conclusion appears to be sound.
Probab=87.26 E-value=1.7 Score=44.28 Aligned_cols=93 Identities=13% Similarity=0.114 Sum_probs=60.7
Q ss_pred CHHHHHHHHHHHHHHHcCCCcCCcCEEEEEcccCCCCCccHHHHHHHHhcccCCCC-eeE-E---eeC-CcChhHHHHHH
Q 012909 56 DVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTD-IEG-V---DST-NACYGGTAALF 129 (453)
Q Consensus 56 d~~~la~~Aa~~aL~~agi~~~~Id~li~~t~s~~~~~~~~a~~l~~~Lgl~G~~~-~~~-~---dv~-~aC~gg~~AL~ 129 (453)
.....+..+++++|+++|++++|||.+++...+. ..-..+.+.||+ ++. +.. + +++ .++++-..+|.
T Consensus 205 ~~~~~~~~~~~~~L~~~gl~~~did~~i~Hq~~~-----~~~~~~~~~lgl--~~ek~~~~~~~~~~GNt~sAsipl~L~ 277 (345)
T TIGR00748 205 AYFHHVVTAAKGLMEKLGLTPEDFDYAVFHQPNG-----KFYLVAARMLGF--PKEQVKPGLLTPRIGNTYSGATPVGLS 277 (345)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHcCEEEeCCCCh-----HHHHHHHHHcCC--CHHHeeccccccccCchhhhHHHHHHH
Confidence 4566777899999999999999999999754222 234457888897 322 221 1 343 36666667776
Q ss_pred HHHHHHHhCCCCCCeEEEEEeecc--ceeeee
Q 012909 130 NCVNWVESASWDGRYGLVVCTDTA--AVAMLI 159 (453)
Q Consensus 130 ~A~~~v~sg~~~~~~aLVv~~d~~--AvA~Ll 159 (453)
.+...++ +|+++|+++.=.- ..++++
T Consensus 278 ~~~~~~~----~Gd~vll~~~G~G~s~~~~~~ 305 (345)
T TIGR00748 278 AVLDIAE----PGDRILAVSYGSGAGSDAFSI 305 (345)
T ss_pred HHHHhcC----CCCEEEEEEecCCcceeEEEE
Confidence 6655332 6788888865443 445554
No 162
>PRK05963 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=87.13 E-value=2.4 Score=42.44 Aligned_cols=94 Identities=12% Similarity=0.056 Sum_probs=55.5
Q ss_pred HHHHHHHHHHHHHHcCCCcCCcCEEEEEcccCCCCCccHHHHHHHHhcccCCCCeeEEeeC--CcChhHHHHHHHHHHHH
Q 012909 58 ISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDST--NACYGGTAALFNCVNWV 135 (453)
Q Consensus 58 ~~la~~Aa~~aL~~agi~~~~Id~li~~t~s~~~~~~~~a~~l~~~Lgl~G~~~~~~~dv~--~aC~gg~~AL~~A~~~v 135 (453)
.....++.+++|+++|++++|||.+++... .+..-..+.+.||+ ++......+. ..|++...-+.+ ...+
T Consensus 226 ~~~~~~~~~~~L~~~gl~~~did~~~~h~~-----~~~~~~~~~~~l~l--~~~k~~~~l~~~Gn~~sas~~~~L-~~~~ 297 (326)
T PRK05963 226 VRMMSGASQNVLASAAMTPQDIDRFFPHQA-----NARIVDKVCETIGI--PRAKAASTLETYGNSSAATIPLSL-SLAN 297 (326)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEeCCC-----CHHHHHHHHHHcCC--CHHHhhhhHHhhCcHHHHHHHHHH-HHHH
Confidence 445567788999999999999999987432 23455667889998 3332222222 223332222222 2334
Q ss_pred HhCC-CCCCeEEEEEeecc--ceeeee
Q 012909 136 ESAS-WDGRYGLVVCTDTA--AVAMLI 159 (453)
Q Consensus 136 ~sg~-~~~~~aLVv~~d~~--AvA~Ll 159 (453)
+.+. .+|+++|+++.-.- ..|+|+
T Consensus 298 ~~~~~~~Gd~vll~~~G~G~~~~~~ll 324 (326)
T PRK05963 298 LEQPLREGERLLFAAAGAGMTGGAVVM 324 (326)
T ss_pred HhCCCCCCCEEEEEEEehhhhheeeEE
Confidence 4442 36789998876443 444444
No 163
>PRK07204 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=87.08 E-value=2.2 Score=42.79 Aligned_cols=84 Identities=7% Similarity=-0.019 Sum_probs=51.1
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEEEcccCCCCCccHHHHHHHHhcccCCCCeeEEeeC-CcChhHHHHHHHHHHHHHhCC
Q 012909 61 SLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDST-NACYGGTAALFNCVNWVESAS 139 (453)
Q Consensus 61 a~~Aa~~aL~~agi~~~~Id~li~~t~s~~~~~~~~a~~l~~~Lgl~G~~~~~~~dv~-~aC~gg~~AL~~A~~~v~sg~ 139 (453)
...+.+++|+++|++++|||.+++...+ ...-..+++.||+ +.......+. .|-.+...-+.+-..++++|.
T Consensus 232 ~~~~i~~~L~~~gl~~~did~~~~H~~~-----~~~~~~i~~~l~l--~~e~~~~~~~~~Gn~~sas~~~~L~~~~~~g~ 304 (329)
T PRK07204 232 LMKFIDKLLMDAGYTLADIDLIVPHQAS-----GPAMRLIRKKLGV--DEERFVTIFEDHGNMIAASIPVALFEAIKQKK 304 (329)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEeCCCC-----HHHHHHHHHHcCC--CHHHhhhhHhhhCcHHHHHHHHHHHHHHHcCC
Confidence 4578889999999999999999875432 2345578899998 4332222222 222222222333334455553
Q ss_pred -CCCCeEEEEEee
Q 012909 140 -WDGRYGLVVCTD 151 (453)
Q Consensus 140 -~~~~~aLVv~~d 151 (453)
.+|+++|+++.-
T Consensus 305 ~~~Gd~vll~~~G 317 (329)
T PRK07204 305 VQRGNKILLLGTS 317 (329)
T ss_pred CCCCCEEEEEEEc
Confidence 367888888653
No 164
>PRK08235 acetyl-CoA acetyltransferase; Provisional
Probab=86.88 E-value=3 Score=43.31 Aligned_cols=127 Identities=14% Similarity=0.109 Sum_probs=63.6
Q ss_pred echhHHhhhhCCCcCeeeEcccceEEeccCCCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEEcccCCCCCccHHHHHHH
Q 012909 23 VLQEALEVHDGVSKGKYTVGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQ 102 (453)
Q Consensus 23 v~~~~l~~~~g~~~~k~~~Gig~r~~av~~~~ed~~~la~~Aa~~aL~~agi~~~~Id~li~~t~s~~~~~~~~a~~l~~ 102 (453)
|..++.++.++.+|-.+..|.+.. .. . ..+.......|++++|+++|++|+|||.+.+. |..........+
T Consensus 259 l~s~~~A~~~~~~p~~~i~g~~~~--~~-~-~~~~~~~~~~a~~~al~~agl~~~did~~e~~-----d~f~~~~l~~~e 329 (393)
T PRK08235 259 LMSEDRAKQEGRKPLATILAHTAI--AV-E-AKDFPRTPGYAINALLEKTGKTVEDIDLFEIN-----EAFAAVALASTE 329 (393)
T ss_pred EecHHHHHHCCCCceEEEEEEEec--cc-C-hhhhcchHHHHHHHHHHHhCCCHHHCCeehhc-----chhHHHHHHHHH
Confidence 444555555555554222343321 11 1 11222344689999999999999999999752 222233445567
Q ss_pred HhcccC-CCCeeEEee----CCcChhHHHHHHHHHHHHHhCCCCCCeEEEEEe--eccceeeeecC
Q 012909 103 IFEKYG-NTDIEGVDS----TNACYGGTAALFNCVNWVESASWDGRYGLVVCT--DTAAVAMLIGP 161 (453)
Q Consensus 103 ~Lgl~G-~~~~~~~dv----~~aC~gg~~AL~~A~~~v~sg~~~~~~aLVv~~--d~~AvA~Ll~~ 161 (453)
.||+.. +-+..+--+ -.+|+|....+..+.++ +.. .+++.|+... -=.+.|+||++
T Consensus 330 ~lg~~~~pvN~~GG~la~Ghp~gasG~~~~~~l~~qL-~~~--~~~~g~~~~c~~gG~g~a~~~e~ 392 (393)
T PRK08235 330 IAGIDPEKVNVNGGAVALGHPIGASGARIIVTLIHEL-KRR--GGGIGIAAICSGGGQGDAVLIEV 392 (393)
T ss_pred HhCCCcccCCcCCchHHhCCcHHHHHHHHHHHHHHHH-Hhc--CCCeEEEEEcccccceEEEEEEe
Confidence 788621 011111111 12444444444444443 322 3466555332 11278888764
No 165
>CHL00203 fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Provisional
Probab=86.80 E-value=2.1 Score=42.92 Aligned_cols=92 Identities=8% Similarity=0.020 Sum_probs=54.4
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEEEcccCCCCCccHHHHHHHHhcccCCCCeeEEeeC-CcChhHHHHHHHHHHHHHhCC
Q 012909 61 SLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDST-NACYGGTAALFNCVNWVESAS 139 (453)
Q Consensus 61 a~~Aa~~aL~~agi~~~~Id~li~~t~s~~~~~~~~a~~l~~~Lgl~G~~~~~~~dv~-~aC~gg~~AL~~A~~~v~sg~ 139 (453)
...+.+++|+++|++++|||.+++... .+..-..+.+.||+ +++-....+. .|-.+...-+..-...++.|.
T Consensus 228 ~~~~i~~~L~~~g~~~~did~~~~hq~-----~~~~~~~~~~~lgl--~~~k~~~~l~~~Gn~~sasi~~~L~~~~~~g~ 300 (326)
T CHL00203 228 VPAVIIKCLNALNISIDEVDWFILHQA-----NKRILEAIANRLSV--PNSKMITNLEKYGNTSAASIPLALDEAIQNNK 300 (326)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEECCC-----CHHHHHHHHHHhCC--CHHHhhhHHHhhCcHHHHHHHHHHHHHHHhCC
Confidence 455688999999999999999987542 23445568899998 4332222332 222222222222233345543
Q ss_pred -CCCCeEEEEEeec--cceeeee
Q 012909 140 -WDGRYGLVVCTDT--AAVAMLI 159 (453)
Q Consensus 140 -~~~~~aLVv~~d~--~AvA~Ll 159 (453)
.+|+++|+++.-. ...|+|+
T Consensus 301 ~~~Gd~vll~~~G~G~s~~~~v~ 323 (326)
T CHL00203 301 IQPGQIIVLSGFGAGLTWGAIVL 323 (326)
T ss_pred CCCCCEEEEEEEchhhhheEEEE
Confidence 3788898887432 2444444
No 166
>PRK08257 acetyl-CoA acetyltransferase; Validated
Probab=86.65 E-value=4.5 Score=43.42 Aligned_cols=134 Identities=14% Similarity=0.047 Sum_probs=75.6
Q ss_pred eechhHHhhhhCCCcCe--eeEcccceEEec-cCCCCCH--HHHHHHHHHHHHHHcCCCcCCcCEEEEEcccCCCCCccH
Q 012909 22 CVLQEALEVHDGVSKGK--YTVGLGQDCMAF-CSEVEDV--ISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSI 96 (453)
Q Consensus 22 ~v~~~~l~~~~g~~~~k--~~~Gig~r~~av-~~~~ed~--~~la~~Aa~~aL~~agi~~~~Id~li~~t~s~~~~~~~~ 96 (453)
.|..++.++..++++.+ |..|.+...-.. .....+. ......|++++++++|++++|||.+.+-++.+. .
T Consensus 250 il~S~e~A~~l~~~~~~~V~i~g~a~~~~~~~~~~r~~~~~~~~~~~aa~~a~~~AGi~~~Did~~elydcF~~-----~ 324 (498)
T PRK08257 250 LLTSVAKARRLGVPEDRWVYLHGGADAHDPYDILERPDLHRSPAIRAAGRRALALAGLGIDDIDAFDLYSCFPS-----A 324 (498)
T ss_pred EEeeHHHHHhcCCCCCceEEEEEEEEeeCccccccccccccChHHHHHHHHHHHHhCCCHHHCCEEEeccCCHH-----H
Confidence 56667777777776443 234555432110 0111222 222346999999999999999999998765443 2
Q ss_pred HHHHHHHhcccCCCCeeEEeeCC-----c---ChhHHHHHHHHHHHHHhCCCCCCeEEEEEee-cc--ceeeeecCCC
Q 012909 97 KTFLMQIFEKYGNTDIEGVDSTN-----A---CYGGTAALFNCVNWVESASWDGRYGLVVCTD-TA--AVAMLIGPDA 163 (453)
Q Consensus 97 a~~l~~~Lgl~G~~~~~~~dv~~-----a---C~gg~~AL~~A~~~v~sg~~~~~~aLVv~~d-~~--AvA~Ll~~~~ 163 (453)
.....+.||+.+.. -..+.+.. | .+.|+.++.-+...|+.. +++++||.+.- .. .+++|++..|
T Consensus 325 ~~~~~E~LGl~~~g-~~pvN~sGGl~s~G~P~~a~g~~~i~E~v~QLRg~--~~~~gLv~~~GG~~~~~~~~vl~~~p 399 (498)
T PRK08257 325 VQVAARELGLDLDD-PRPLTVTGGLPFFGGPGNNYVTHAIAEMVERLRAN--PGRRGLVTANGGYLTKHSVGVYSTEP 399 (498)
T ss_pred HHHHHHHcCcCCCC-CCCcCCCcChhhcCCchhhHHHHHHHHHHHHHhhc--CCCEEEEECCCChhhceEEEEEeCCC
Confidence 33445888883221 11223322 1 222455556566677655 45888887643 22 3455566665
No 167
>PRK09258 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=86.63 E-value=2.7 Score=42.25 Aligned_cols=85 Identities=6% Similarity=-0.028 Sum_probs=52.4
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCEEEEEcccCCCCCccHHHHHHHHhcccCCCCeeEEee--CCcChhHHHHHHHHHHHHH
Q 012909 59 SMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDS--TNACYGGTAALFNCVNWVE 136 (453)
Q Consensus 59 ~la~~Aa~~aL~~agi~~~~Id~li~~t~s~~~~~~~~a~~l~~~Lgl~G~~~~~~~dv--~~aC~gg~~AL~~A~~~v~ 136 (453)
.....+.+++|+++|++++|||.+++.. ..+..-..+.+.||+ +..-....+ ...|++...-+.+ ..+++
T Consensus 239 ~~~~~~~~~~L~~~g~~~~did~~i~H~-----~~~~~~~~~~~~lgl--~~~k~~~~~~~~GN~~sas~~~~L-~~~~~ 310 (338)
T PRK09258 239 ELAVDTWEAFLAQLGWAVEQVDRVICHQ-----VGAAHTRAILKALGI--DPEKVFTTFPTLGNMGPASLPITL-AMAAE 310 (338)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEecCC-----CCHHHHHHHHHHhCC--CHHHceehHhhhCCcHHhHHHHHH-HHHHH
Confidence 4555678899999999999999998755 233455678889998 432222222 2333333322222 23345
Q ss_pred hCC-CCCCeEEEEEee
Q 012909 137 SAS-WDGRYGLVVCTD 151 (453)
Q Consensus 137 sg~-~~~~~aLVv~~d 151 (453)
.|. .+|+++|+++..
T Consensus 311 ~g~~~~Gd~vll~~~G 326 (338)
T PRK09258 311 EGFLKPGDRVALLGIG 326 (338)
T ss_pred hCCCCCCCEEEEEEec
Confidence 543 267888888754
No 168
>PRK08963 fadI 3-ketoacyl-CoA thiolase; Reviewed
Probab=86.18 E-value=5.5 Score=41.81 Aligned_cols=62 Identities=8% Similarity=0.042 Sum_probs=38.3
Q ss_pred eechhHHhhhhCCCcC-eeeEcccceEEeccCCCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEEcc
Q 012909 22 CVLQEALEVHDGVSKG-KYTVGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSE 87 (453)
Q Consensus 22 ~v~~~~l~~~~g~~~~-k~~~Gig~r~~av~~~~ed~~~la~~Aa~~aL~~agi~~~~Id~li~~t~ 87 (453)
.|..++.++.++.+|- ++ .|.+... ..+..+...-...|++++|+++|++++|||.+.+...
T Consensus 275 vl~see~A~~l~~~p~~~i-~g~~~~~---~~~~~~~~~~~~~a~~~al~~AGl~~~DiD~~Ei~d~ 337 (428)
T PRK08963 275 LLMSESRAKALGLTPLGYL-RSYAFAA---IDVWQDMLLGPAYATPLALERAGLTLADLTLIDMHEA 337 (428)
T ss_pred EEecHHHHHHcCCCccEEE-EEEeccc---CCchhhhhhHHHHHHHHHHHHcCCCHHHCCEEEEccc
Confidence 3445555655665554 33 3344322 1221223344567999999999999999999987654
No 169
>cd00825 decarbox_cond_enzymes decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction. Members are involved in the synthesis of fatty acids and polyketides, a diverse group of natural products. Both pathways are an iterative series of additions of small carbon units, usually acetate, to a nascent acyl group. There are 2 classes of decarboxylating condensing enzymes, which can be distinguished by sequence similarity, type of active site residues and type of primer units (acetyl CoA or acyl carrier protein (ACP) linked units).
Probab=85.57 E-value=6.5 Score=39.08 Aligned_cols=78 Identities=10% Similarity=-0.100 Sum_probs=46.0
Q ss_pred HHHHHHHHHHHHHHcCCCcCCcCEEEEEcccCCCCCccHHHHHHHHhcccCCCCeeEE----eeC-CcChhHHHHHHHHH
Q 012909 58 ISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGV----DST-NACYGGTAALFNCV 132 (453)
Q Consensus 58 ~~la~~Aa~~aL~~agi~~~~Id~li~~t~s~~~~~~~~a~~l~~~Lgl~G~~~~~~~----dv~-~aC~gg~~AL~~A~ 132 (453)
......+++++|+++|++++|||.++..........+-....+...++. ...... .++ .+++++...|..+.
T Consensus 204 ~~~~~~~i~~al~~agl~~~did~~~~h~~~~~~~~~~e~~~~~~~~~~---~~~~~~~~~~~~G~~~aas~~~~l~~~~ 280 (332)
T cd00825 204 AEGLARAAKEALAVAGLTVWDIDYLVAHGTGTPIGDVKELKLLRSEFGD---KSPAVSATKAMTGNLSSAAVVLAVDEAV 280 (332)
T ss_pred HHHHHHHHHHHHHHcCCCHhHCCEEEccCCCCCCCCHHHHHHHHHHhCC---CCceeECCCcccccchhHhHHHHHHHHH
Confidence 3455689999999999999999999976544332222222222233331 112222 233 35666777777777
Q ss_pred HHHHhC
Q 012909 133 NWVESA 138 (453)
Q Consensus 133 ~~v~sg 138 (453)
..++.+
T Consensus 281 ~~~~~~ 286 (332)
T cd00825 281 LMLEHG 286 (332)
T ss_pred HHHhcC
Confidence 666655
No 170
>PLN02287 3-ketoacyl-CoA thiolase
Probab=84.82 E-value=4.8 Score=42.63 Aligned_cols=98 Identities=10% Similarity=0.141 Sum_probs=54.2
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEEEcccCCCCCccHHHHHHHHhcccC-CCCeeE----EeeCCcChhHHHHHHHHHHHH
Q 012909 61 SLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYG-NTDIEG----VDSTNACYGGTAALFNCVNWV 135 (453)
Q Consensus 61 a~~Aa~~aL~~agi~~~~Id~li~~t~s~~~~~~~~a~~l~~~Lgl~G-~~~~~~----~dv~~aC~gg~~AL~~A~~~v 135 (453)
...|++++|+++|++|+|||.+.+. +..........+.||+.. +-+..+ +---.+++|....+..+.++-
T Consensus 333 ~~~A~~~al~~Agl~~~DID~~Ei~-----daFa~~~l~~~e~lG~~~~pvN~sGG~la~GHp~gAsG~~~v~~l~~qL~ 407 (452)
T PLN02287 333 PAVAIPAAVKAAGLELDDIDLFEIN-----EAFASQFVYCCKKLGLDPEKVNVNGGAIALGHPLGATGARCVATLLHEMK 407 (452)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEec-----chHHHHHHHHHHHcCCCccccCCCCcHHhccCcHHHHHHHHHHHHHHHHH
Confidence 4689999999999999999999754 212122233356777621 011111 111125555544444444444
Q ss_pred HhCCCCCCeEEEEE--eeccceeeeecCCCC
Q 012909 136 ESASWDGRYGLVVC--TDTAAVAMLIGPDAP 164 (453)
Q Consensus 136 ~sg~~~~~~aLVv~--~d~~AvA~Ll~~~~~ 164 (453)
+.+. ++++.|+.. +.-.++||||+.-+.
T Consensus 408 ~~~~-~~~~gl~~~c~ggG~g~a~~ie~~~~ 437 (452)
T PLN02287 408 RRGK-DCRFGVVSMCIGTGMGAAAVFERGDS 437 (452)
T ss_pred hcCC-CCCeeEEEEccccCceeEEEEEecCc
Confidence 4331 115555442 223399999988754
No 171
>TIGR02445 fadA fatty oxidation complex, beta subunit FadA. This subunit of the FadBA complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit. This protein is almost always located adjacent to FadB (TIGR02437). The FadBA complex is the major complex active for beta-oxidation of fatty acids in E. coli.
Probab=84.54 E-value=9.8 Score=39.38 Aligned_cols=93 Identities=12% Similarity=0.200 Sum_probs=51.1
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEEEcccCCCCCccHHHHHHHHhcccCC----CCee----EEeeCCcChhHHHHHHHHH
Q 012909 61 SLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGN----TDIE----GVDSTNACYGGTAALFNCV 132 (453)
Q Consensus 61 a~~Aa~~aL~~agi~~~~Id~li~~t~s~~~~~~~~a~~l~~~Lgl~G~----~~~~----~~dv~~aC~gg~~AL~~A~ 132 (453)
...|++++++++|++|+|||.+.+.- ..........+.||+... -|.. ++---.|++|.-..+. +.
T Consensus 282 ~~~a~~~al~~AGi~p~DId~~Ei~d-----aFa~~~l~~~e~lg~~~~g~~~vN~~GG~la~GhP~GATG~r~v~~-l~ 355 (385)
T TIGR02445 282 PVPATQKALKRAGLSISDIDVFELNE-----AFAAQALPCLKDLGLLDKMDEKVNLNGGAIALGHPLGCSGARISTT-LL 355 (385)
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEEcc-----ccHHHHHHHHHHcCCCCCCCCCcCCCCchhhcCCCccccHHHHHHH-HH
Confidence 46789999999999999999998732 222334444577776211 1111 1111125555333333 33
Q ss_pred HHHHhCCCCCCeEEEEEeecc--ceeeeecC
Q 012909 133 NWVESASWDGRYGLVVCTDTA--AVAMLIGP 161 (453)
Q Consensus 133 ~~v~sg~~~~~~aLVv~~d~~--AvA~Ll~~ 161 (453)
+.+... ++++.|+...--. ++||||++
T Consensus 356 ~~l~~~--~~~~Gl~~~~~g~g~g~a~~~e~ 384 (385)
T TIGR02445 356 NLMEQK--DATFGLATMCIGLGQGIATVFER 384 (385)
T ss_pred HHHHhc--CCCeEEEEEecccChhheEEEEe
Confidence 545432 3466665433222 77888763
No 172
>PRK06504 acetyl-CoA acetyltransferase; Provisional
Probab=84.49 E-value=9.2 Score=39.68 Aligned_cols=44 Identities=16% Similarity=0.151 Sum_probs=32.5
Q ss_pred HHHHHHHHHHHHHHcCCCcCCcCEEEEEcccCCCCCccHHHHHHHHhcc
Q 012909 58 ISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEK 106 (453)
Q Consensus 58 ~~la~~Aa~~aL~~agi~~~~Id~li~~t~s~~~~~~~~a~~l~~~Lgl 106 (453)
......|++++++++|++|+|||.+.+..... ...-...+.||+
T Consensus 287 ~~~~~~a~~~a~~~agl~~~Did~~Ei~d~Fa-----~~~l~~~e~lG~ 330 (390)
T PRK06504 287 LEAPLPATERALKKAGMKIDDIDLYEVNEAFA-----SVPLAWLKATGA 330 (390)
T ss_pred hccHHHHHHHHHHHcCCCHHHCCEEEecccch-----HHHHHHHHHhCC
Confidence 34556799999999999999999998754322 333455678887
No 173
>PF02801 Ketoacyl-synt_C: Beta-ketoacyl synthase, C-terminal domain; InterPro: IPR014031 Beta-ketoacyl-ACP synthase 2.3.1.41 from EC (KAS) [] is the enzyme that catalyzes the condensation of malonyl-ACP with the growing fatty acid chain. It is found as a component of a number of enzymatic systems, including fatty acid synthetase (FAS), which catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH; the multi-functional 6-methysalicylic acid synthase (MSAS) from Penicillium patulum [], which is involved in the biosynthesis of a polyketide antibiotic; polyketide antibiotic synthase enzyme systems; Emericella nidulans multifunctional protein Wa, which is involved in the biosynthesis of conidial green pigment; Rhizobium nodulation protein nodE, which probably acts as a beta-ketoacyl synthase in the synthesis of the nodulation Nod factor fatty acyl chain; and yeast mitochondrial protein CEM1. The condensation reaction is a two step process, first the acyl component of an activated acyl primer is transferred to a cysteine residue of the enzyme and is then condensed with an activated malonyl donor with the concomitant release of carbon dioxide. This entry represents the C-terminal domain of beta-ketoacyl-ACP synthases. The active site is contained in a cleft betweeen N- and C-terminal domains, with residues from both domains contributing to substrate binding and catalysis [].; PDB: 2UV8_B 3HMJ_A 2VKZ_C 4EWG_A 1TQY_H 1E5M_A 1J3N_B 2VZ8_A 2VZ9_B 3O04_A ....
Probab=83.65 E-value=1.6 Score=37.12 Aligned_cols=78 Identities=14% Similarity=0.189 Sum_probs=48.2
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEE-EcccCCCCCccHHHHHHHHhcccC-CCCeeEEeeC-----CcChhHHHHHHHHHH
Q 012909 61 SLTVVTSLLEKYKIDPTQIGRLEV-GSETVIDKSKSIKTFLMQIFEKYG-NTDIEGVDST-----NACYGGTAALFNCVN 133 (453)
Q Consensus 61 a~~Aa~~aL~~agi~~~~Id~li~-~t~s~~~~~~~~a~~l~~~Lgl~G-~~~~~~~dv~-----~aC~gg~~AL~~A~~ 133 (453)
-..+.+++|+++|++|++||.|.. ++.++. ..+.-..-+.+.++-.. ...++...++ ...++|+..|..+.-
T Consensus 27 ~~~~i~~al~~agi~~~~I~~i~~hg~Gt~~-~D~~E~~ai~~~~~~~~~~~~~~v~s~K~~~Gh~~~asG~~~l~~~~l 105 (119)
T PF02801_consen 27 LARAIRRALADAGISPEDIDYIEAHGTGTPL-GDAAEAEAIARVFGDSARQQPVPVGSVKSNIGHTEAASGLLSLAKALL 105 (119)
T ss_dssp HHHHHHHHHHHHTS-GGGEEEEE----SSHH-HHHHHHHHHHHHHGGGGGTSTSEEE-THHHH-B-GGGHHHHHHHHHHH
T ss_pred HHHHHHHHHhhhccccccceeeeeecccccc-chhhhhhhhhhhhcccccccccceeccccccccccccchHHHHHHHHH
Confidence 367899999999999999999985 343332 12344456667776411 1235555443 366777778888887
Q ss_pred HHHhCC
Q 012909 134 WVESAS 139 (453)
Q Consensus 134 ~v~sg~ 139 (453)
.++.+.
T Consensus 106 ~l~~~~ 111 (119)
T PF02801_consen 106 ALEHGT 111 (119)
T ss_dssp HHHHTE
T ss_pred HHhcCC
Confidence 777663
No 174
>PLN02644 acetyl-CoA C-acetyltransferase
Probab=83.09 E-value=6.2 Score=40.95 Aligned_cols=94 Identities=13% Similarity=0.194 Sum_probs=50.5
Q ss_pred HHHHHHHHHHHHcCCCcCCcCEEEEEcccCCCCCccHHHHHHHHhcccC-CCCeeEEee--C--CcChhHHHHHHHHHHH
Q 012909 60 MSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYG-NTDIEGVDS--T--NACYGGTAALFNCVNW 134 (453)
Q Consensus 60 la~~Aa~~aL~~agi~~~~Id~li~~t~s~~~~~~~~a~~l~~~Lgl~G-~~~~~~~dv--~--~aC~gg~~AL~~A~~~ 134 (453)
....+++++++++|++|+|||.+.+.-. .........+.||+.. +-+..+--+ + .+++|....+..+.+
T Consensus 292 ~~~~a~~~al~~Agi~~~Did~~Ei~d~-----f~~~~l~~~e~lg~~~~~vN~~GG~l~~Ghp~gasG~~~~~~~~~~- 365 (394)
T PLN02644 292 APALAIPKALKHAGLEASQVDYYEINEA-----FSVVALANQKLLGLDPEKVNVHGGAVSLGHPIGCSGARILVTLLGV- 365 (394)
T ss_pred hHHHHHHHHHHHcCCCHHHCCEEEeCcH-----HHHHHHHHHHHhCCCccccCCCCChHhhCCCHHHHHHHHHHHHHHH-
Confidence 3356999999999999999999987322 2233344456777621 111111111 1 233333333333333
Q ss_pred HHhCCCCCCeEEEEE--eeccceeeeecC
Q 012909 135 VESASWDGRYGLVVC--TDTAAVAMLIGP 161 (453)
Q Consensus 135 v~sg~~~~~~aLVv~--~d~~AvA~Ll~~ 161 (453)
|+.. ++++.|+.. +--.+.||||+.
T Consensus 366 l~~~--~~~~g~~~~~~~gg~g~a~~~e~ 392 (394)
T PLN02644 366 LRSK--NGKYGVAGICNGGGGASAIVVEL 392 (394)
T ss_pred HHhc--CCCeEEEEEeccCCceeEEEEEe
Confidence 3322 346666622 222288888864
No 175
>PRK06445 acetyl-CoA acetyltransferase; Provisional
Probab=82.96 E-value=11 Score=39.20 Aligned_cols=124 Identities=10% Similarity=0.062 Sum_probs=67.7
Q ss_pred echhHHhhhhCCCcC-eeeEcccceEEeccCCCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEEcccCCCCCccHHHHHH
Q 012909 23 VLQEALEVHDGVSKG-KYTVGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLM 101 (453)
Q Consensus 23 v~~~~l~~~~g~~~~-k~~~Gig~r~~av~~~~ed~~~la~~Aa~~aL~~agi~~~~Id~li~~t~s~~~~~~~~a~~l~ 101 (453)
|..++.++.++.++- ++ .|.+.... .+.... .-...|++++|+++|++|+|||.+.+.-. .........
T Consensus 260 l~s~~~A~~~~~~~~a~i-~g~~~~~~---~~~~~~-~~~~~a~~~al~~Agl~~~dId~~e~~d~-----f~~~~l~~~ 329 (394)
T PRK06445 260 LMSKKAVKKYGLKPMAKI-RSFGFAGV---PPAIMG-KGPVPASKKALEKAGLSVKDIDLWEINEA-----FAVVVLYAI 329 (394)
T ss_pred EecHHHHHHCCCCceEEE-EEEEEecc---CCchhc-chHHHHHHHHHHHcCCCHHHcCEEEeccc-----chHHHHHHH
Confidence 444555555555553 33 35554321 111111 12367999999999999999999987542 223344556
Q ss_pred HHhcccCCCC-------eeEEeeCCcChhHHHHHHHHHHHHHhCCCCCCeEEEEEeecc--ceeeeecC
Q 012909 102 QIFEKYGNTD-------IEGVDSTNACYGGTAALFNCVNWVESASWDGRYGLVVCTDTA--AVAMLIGP 161 (453)
Q Consensus 102 ~~Lgl~G~~~-------~~~~dv~~aC~gg~~AL~~A~~~v~sg~~~~~~aLVv~~d~~--AvA~Ll~~ 161 (453)
+.||+ .+. ..++---.+|+|...-+..+.++-..+ +++.|+...--. +.||||+.
T Consensus 330 e~lg~--~~~~vN~~GG~la~Ghp~gatG~~~v~e~~~qL~~~~---~~~gl~~~~~~gg~g~a~~~e~ 393 (394)
T PRK06445 330 KELGL--DPETVNIKGGAIAIGHPLGATGARIVGTLARQLQIKG---KDYGVATLCVGGGQGGAVVLER 393 (394)
T ss_pred HHhCC--CccccCCCCCHHHcCCCccchHHHHHHHHHHHHHhcC---CCEEEEEEcccCChhhEEEEEc
Confidence 77776 211 111111236666655566665554322 366665543222 88888764
No 176
>PLN02326 3-oxoacyl-[acyl-carrier-protein] synthase III
Probab=82.94 E-value=5.4 Score=41.08 Aligned_cols=80 Identities=18% Similarity=0.039 Sum_probs=49.5
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEEEcccCCCCCccHHHHHHHHhcccCCCCeeEEeeCC----cChhHHHHHHHHHHHHH
Q 012909 61 SLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTN----ACYGGTAALFNCVNWVE 136 (453)
Q Consensus 61 a~~Aa~~aL~~agi~~~~Id~li~~t~s~~~~~~~~a~~l~~~Lgl~G~~~~~~~dv~~----aC~gg~~AL~~A~~~v~ 136 (453)
...+++++|+++|++++|||.+++... .+.+-..+++.||+ +.+.....+.. ++++-..+|. .+++
T Consensus 282 ~~~~i~~~L~~~gl~~~dId~~v~Hq~-----n~~~~~~~~~~Lgl--~~ek~~~~l~~~GNt~sAsi~~~L~---~~~~ 351 (379)
T PLN02326 282 VPQVIESALQKAGLTAESIDWLLLHQA-----NQRIIDAVAQRLGI--PPEKVISNLANYGNTSAASIPLALD---EAVR 351 (379)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEECCC-----CHHHHHHHHHHcCC--CHHHeeecHhhcCcHHHHHHHHHHH---HHHH
Confidence 445778899999999999999987542 33344568899998 43322233322 2233333333 3345
Q ss_pred hCC-CCCCeEEEEEe
Q 012909 137 SAS-WDGRYGLVVCT 150 (453)
Q Consensus 137 sg~-~~~~~aLVv~~ 150 (453)
.+. .+|+++|+++.
T Consensus 352 ~g~~~~Gd~vll~~~ 366 (379)
T PLN02326 352 SGKVKKGDVIATAGF 366 (379)
T ss_pred cCCCCCCCEEEEEEE
Confidence 543 26788888865
No 177
>TIGR00747 fabH 3-oxoacyl-(acyl-carrier-protein) synthase III. Active site residues include Cys112, His244 and Asn274 of E. coli FabH. Cys-112 is the site of acyl group attachment.
Probab=82.66 E-value=5 Score=39.95 Aligned_cols=85 Identities=16% Similarity=0.078 Sum_probs=51.7
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCEEEEEcccCCCCCccHHHHHHHHhcccCCCCeeEEeeC--CcChhHHHHHHHHHHHHH
Q 012909 59 SMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDST--NACYGGTAALFNCVNWVE 136 (453)
Q Consensus 59 ~la~~Aa~~aL~~agi~~~~Id~li~~t~s~~~~~~~~a~~l~~~Lgl~G~~~~~~~dv~--~aC~gg~~AL~~A~~~v~ 136 (453)
....++.+++|+++|++++|||.+++... .+..-..+.+.||+ +..-....+. ..|.+...-+.+ ..+++
T Consensus 219 ~~~~~~~~~~l~~~g~~~~di~~~~~h~~-----~~~~~~~~~~~lgi--~~~k~~~~~~~~Gn~~sas~~~~L-~~~~~ 290 (318)
T TIGR00747 219 RKMGDVVEETLEANGLDPEDIDWFVPHQA-----NLRIIEALAKRLEL--DMSQVVKTVHKYGNTSAASIPLAL-DELLR 290 (318)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEECCC-----CHHHHHHHHHHcCC--CHHHeeehHhhhCCHHHHHHHHHH-HHHHH
Confidence 34567788999999999999999997442 34456678899998 3322112232 233333222222 23444
Q ss_pred hCC-CCCCeEEEEEee
Q 012909 137 SAS-WDGRYGLVVCTD 151 (453)
Q Consensus 137 sg~-~~~~~aLVv~~d 151 (453)
+|. .+|+++|+++.-
T Consensus 291 ~~~~~~Gd~vll~~~G 306 (318)
T TIGR00747 291 TGRIKPGDLLLLVAFG 306 (318)
T ss_pred cCCCCCCCEEEEEEEe
Confidence 543 267899888753
No 178
>cd00830 KAS_III Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems. It is found in bacteria and plants. Elongation of fatty acids in the type II systems occurs by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. KASIII initiates this process by specifically using acetyl-CoA over acyl-CoA.
Probab=82.65 E-value=4 Score=40.47 Aligned_cols=84 Identities=12% Similarity=0.066 Sum_probs=51.9
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCEEEEEcccCCCCCccHHHHHHHHhcccCCCCeeEEeeC--CcChhHHHHHHHHHHHHH
Q 012909 59 SMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDST--NACYGGTAALFNCVNWVE 136 (453)
Q Consensus 59 ~la~~Aa~~aL~~agi~~~~Id~li~~t~s~~~~~~~~a~~l~~~Lgl~G~~~~~~~dv~--~aC~gg~~AL~~A~~~v~ 136 (453)
....++.+++|+++|++++|||.+++... .+..-..+.+.||+ +..-....+. ..|.+.. .+.+-..+++
T Consensus 223 ~~~~~~i~~~l~~~g~~~~di~~~~~h~~-----~~~~~~~~~~~lgl--~~~~~~~~~~~~Gn~~sas-~~~~L~~~~~ 294 (320)
T cd00830 223 RLMPESIEEALEKAGLTPDDIDWFVPHQA-----NLRIIEAVAKRLGL--PEEKVVVNLDRYGNTSAAS-IPLALDEAIE 294 (320)
T ss_pred HhhHHHHHHHHHHcCCCHHHCCEEEECCC-----CHHHHHHHHHHhCC--CHHHhhhhHHhhCcHHHHH-HHHHHHHHHH
Confidence 44567889999999999999999987642 33445568889998 3322222222 2333322 2333334455
Q ss_pred hCC-CCCCeEEEEEe
Q 012909 137 SAS-WDGRYGLVVCT 150 (453)
Q Consensus 137 sg~-~~~~~aLVv~~ 150 (453)
.+. .+|+++|+++.
T Consensus 295 ~~~~~~G~~vll~~~ 309 (320)
T cd00830 295 EGKLKKGDLVLLLGF 309 (320)
T ss_pred cCCCCCCCEEEEEEE
Confidence 553 26789888875
No 179
>PRK07851 acetyl-CoA acetyltransferase; Provisional
Probab=82.17 E-value=4.9 Score=41.88 Aligned_cols=127 Identities=12% Similarity=0.098 Sum_probs=63.0
Q ss_pred eechhHHhhhhCCCcC-eeeEcccceEEeccCCCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEEcccCCCCCccHHHHH
Q 012909 22 CVLQEALEVHDGVSKG-KYTVGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFL 100 (453)
Q Consensus 22 ~v~~~~l~~~~g~~~~-k~~~Gig~r~~av~~~~ed~~~la~~Aa~~aL~~agi~~~~Id~li~~t~s~~~~~~~~a~~l 100 (453)
.|..++.++.++..+- ++ .|.+.... .++..... ...|++++++++|++|+|||.+.+. |........-
T Consensus 270 vl~s~e~A~~~~~~~~a~I-~g~~~~~~---~~~~~~~~-~~~a~~~al~~Agi~~~did~~ei~-----d~f~~~~l~~ 339 (406)
T PRK07851 270 VIMSDTKARELGLTPLARI-VSTGVSGL---SPEIMGLG-PVEASKQALARAGMSIDDIDLVEIN-----EAFAAQVLPS 339 (406)
T ss_pred EEccHHHHHHcCCCccEEE-EEEEEccC---CCCccchh-HHHHHHHHHHHhCCCHHHCCeehhh-----hHHHHHHHHH
Confidence 3445555555565553 33 45554321 12212222 4689999999999999999999642 1111222233
Q ss_pred HHHhcccC-CCCeeEEee----CCcChhHHHHHHHHHHHHHhCCCCCCeEEEEEeec--cceeeeecC
Q 012909 101 MQIFEKYG-NTDIEGVDS----TNACYGGTAALFNCVNWVESASWDGRYGLVVCTDT--AAVAMLIGP 161 (453)
Q Consensus 101 ~~~Lgl~G-~~~~~~~dv----~~aC~gg~~AL~~A~~~v~sg~~~~~~aLVv~~d~--~AvA~Ll~~ 161 (453)
.+.||+.. +.+..+--+ -.+|+|....+....++ +.. ++++.|+..+=- .++||||++
T Consensus 340 le~lg~~~~pvN~~GG~l~~Ghp~gasg~~~~~~~~~qL-~~~--~~~~g~~~~~~~gg~g~a~~~e~ 404 (406)
T PRK07851 340 ARELGIDEDKLNVSGGAIALGHPFGMTGARITTTLLNNL-QTH--DKTFGLETMCVGGGQGMAMVLER 404 (406)
T ss_pred HHHhCCCccccCCCCChHhhcCcHHHHHHHHHHHHHHHH-Hhc--CCCeEEEEEccccChhhEEEEEe
Confidence 46777621 111111111 12444444444444443 333 456665543221 177888764
No 180
>PRK06633 acetyl-CoA acetyltransferase; Provisional
Probab=81.54 E-value=6.5 Score=40.82 Aligned_cols=59 Identities=12% Similarity=0.079 Sum_probs=36.4
Q ss_pred eechhHHhhhhCCCcC-eeeEcccceEEeccCCCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEE
Q 012909 22 CVLQEALEVHDGVSKG-KYTVGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVG 85 (453)
Q Consensus 22 ~v~~~~l~~~~g~~~~-k~~~Gig~r~~av~~~~ed~~~la~~Aa~~aL~~agi~~~~Id~li~~ 85 (453)
.|..++.++.+|..+- ++ .|.+... . ++.. .......|++++|+++|++|+|||.+.+.
T Consensus 257 vl~see~A~~~g~~p~a~I-~g~~~~~--~-~~~~-~~~~~~~a~~~Al~~AGl~p~DID~~ei~ 316 (392)
T PRK06633 257 MVVSEEALKKHNLTPLARI-VSYASAG--V-DPSI-MGTAPVPASQKALSKAGWSVNDLEVIEVN 316 (392)
T ss_pred EEecHHHHHHCCCCeeEEE-EEEEEec--C-Ccch-hchHHHHHHHHHHHHcCCCHHHcCeeehh
Confidence 3445566666665552 44 3444331 1 1111 11334789999999999999999999853
No 181
>PRK09352 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=81.26 E-value=5.3 Score=39.73 Aligned_cols=91 Identities=14% Similarity=0.014 Sum_probs=55.5
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEEEcccCCCCCccHHHHHHHHhcccCCCCeeEEeeC--CcChhHHHHHHHHHHHHHhC
Q 012909 61 SLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDST--NACYGGTAALFNCVNWVESA 138 (453)
Q Consensus 61 a~~Aa~~aL~~agi~~~~Id~li~~t~s~~~~~~~~a~~l~~~Lgl~G~~~~~~~dv~--~aC~gg~~AL~~A~~~v~sg 138 (453)
..++.+++|+++|++++|||.++.... .+..-..+.+.||+ +..-....+. ..|.+ ..-+..-..+++.|
T Consensus 221 ~~~~i~~~l~~~g~~~~di~~~~~h~~-----~~~~~~~~~~~lg~--~~~~~~~~~~~~Gn~~~-a~~~~~L~~~~~~g 292 (319)
T PRK09352 221 LAKVAREALEAAGLTPEDIDWLVPHQA-----NLRIIDATAKKLGL--PMEKVVVTVDKYGNTSA-ASIPLALDEAVRDG 292 (319)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEECCC-----CHHHHHHHHHHhCC--CHHHhhhhHHhhCCHHH-HHHHHHHHHHHHcC
Confidence 456888899999999999999997542 33455678889998 3321111221 12322 23333334555555
Q ss_pred C-CCCCeEEEEEeecc--ceeeee
Q 012909 139 S-WDGRYGLVVCTDTA--AVAMLI 159 (453)
Q Consensus 139 ~-~~~~~aLVv~~d~~--AvA~Ll 159 (453)
. .+|+++|+++.-.- ..|+|+
T Consensus 293 ~~~~Gd~vll~s~G~G~~~~~~ll 316 (319)
T PRK09352 293 RIKRGDLVLLEGFGGGLTWGAALV 316 (319)
T ss_pred CCCCCCEEEEEEEchhheeEEEEE
Confidence 3 36889998877543 555555
No 182
>PRK09268 acetyl-CoA acetyltransferase; Provisional
Probab=80.51 E-value=4.8 Score=42.28 Aligned_cols=65 Identities=12% Similarity=0.090 Sum_probs=39.1
Q ss_pred eechhHHhhhhCCCcCeee-EcccceEEeccCCCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEEcc
Q 012909 22 CVLQEALEVHDGVSKGKYT-VGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSE 87 (453)
Q Consensus 22 ~v~~~~l~~~~g~~~~k~~-~Gig~r~~av~~~~ed~~~la~~Aa~~aL~~agi~~~~Id~li~~t~ 87 (453)
.|..++.++..+.+|-++. .+........ ....+.......|++++++++|++|+|||.+.+...
T Consensus 272 vl~s~~~A~~l~~~p~~~i~~~~~~~~~~~-~~~~~~~~~~~~a~~~a~~~AGl~~~Did~~Ei~d~ 337 (427)
T PRK09268 272 LLASEEWAAEHGLPVLAYLVDAETAAVDFV-HGKEGLLMAPAYAVPRLLARNGLTLQDFDFYEIHEA 337 (427)
T ss_pred EEecHHHHHHcCCCceEEEEEEEEEcCCcc-cccchhhccHHHHHHHHHHHcCCCHHHCCEEEeccc
Confidence 4566677776676664221 2211111000 111233345567999999999999999999998653
No 183
>PRK14691 3-oxoacyl-(acyl carrier protein) synthase II; Provisional
Probab=80.15 E-value=11 Score=38.36 Aligned_cols=58 Identities=12% Similarity=0.163 Sum_probs=39.2
Q ss_pred HHHHHHHHHHHHHHcCCCcCCcCEEEE-EcccCCCCCccHHHHHHHHhcccCCCCeeEEeeC
Q 012909 58 ISMSLTVVTSLLEKYKIDPTQIGRLEV-GSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDST 118 (453)
Q Consensus 58 ~~la~~Aa~~aL~~agi~~~~Id~li~-~t~s~~~~~~~~a~~l~~~Lgl~G~~~~~~~dv~ 118 (453)
..-...|.+++|+++|++|+|||.|.. +|.|+. ..+.-..-|.+.||. ...++...++
T Consensus 205 ~~~~~~ai~~AL~~Agl~p~dIdyIeaHgtgT~~-~D~~E~~Ai~~~fg~--~~~~~v~s~K 263 (342)
T PRK14691 205 GDGAYRAMKIALRQAGITPEQVQHLNAHATSTPV-GDLGEINAIKHLFGE--SNALAITSTK 263 (342)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEecCCCCcC-CCHHHHHHHHHHhCC--CCCceEECCc
Confidence 445678999999999999999999884 444443 234445667777774 2344444443
No 184
>PRK08131 acetyl-CoA acetyltransferase; Provisional
Probab=79.40 E-value=11 Score=39.31 Aligned_cols=59 Identities=7% Similarity=0.018 Sum_probs=37.6
Q ss_pred eechhHHhhhhCCCcC-eeeEcccceEEeccCCCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEE
Q 012909 22 CVLQEALEVHDGVSKG-KYTVGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVG 85 (453)
Q Consensus 22 ~v~~~~l~~~~g~~~~-k~~~Gig~r~~av~~~~ed~~~la~~Aa~~aL~~agi~~~~Id~li~~ 85 (453)
.|..++.++.++..|- ++ .|.+.... .+.... .-...|++++++++|++|+|||.+.+.
T Consensus 263 vl~s~~~a~~~~~~p~~~i-~g~~~~~~---~~~~~~-~~~~~a~~~a~~~agl~~~did~~ei~ 322 (401)
T PRK08131 263 LIGSRAAGEKYGLKPMARI-LSSAAAGV---EPRIMG-IGPVEAIKKALARAGLTLDDMDIIEIN 322 (401)
T ss_pred EEeeHHHHHHcCCCceEEE-EEEEEecc---CCcccc-chHHHHHHHHHHHcCCCHHHCCeehhc
Confidence 4455566666665443 33 34444321 222222 245789999999999999999999864
No 185
>PRK07108 acetyl-CoA acetyltransferase; Provisional
Probab=79.33 E-value=5.8 Score=41.13 Aligned_cols=25 Identities=20% Similarity=0.223 Sum_probs=22.2
Q ss_pred HHHHHHHHHHHHcCCCcCCcCEEEE
Q 012909 60 MSLTVVTSLLEKYKIDPTQIGRLEV 84 (453)
Q Consensus 60 la~~Aa~~aL~~agi~~~~Id~li~ 84 (453)
-...|++++|+++|++|+|||.+.+
T Consensus 291 ~~~~a~~~al~~agl~~~Did~~ei 315 (392)
T PRK07108 291 GPVFAVPKLLKQAGLKVDDIDLWEL 315 (392)
T ss_pred hHHHHHHHHHHHcCCCHHHcCchHh
Confidence 3478999999999999999999874
No 186
>PRK07515 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=77.83 E-value=9.4 Score=39.10 Aligned_cols=84 Identities=11% Similarity=0.207 Sum_probs=48.5
Q ss_pred HHHHHHHHHHHHHHcCCCcCCcCEEEEEcccCCCCCccHHHHHHHH-hcccCCCC-ee-EEe-eC-CcChhHHHHHHHHH
Q 012909 58 ISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQI-FEKYGNTD-IE-GVD-ST-NACYGGTAALFNCV 132 (453)
Q Consensus 58 ~~la~~Aa~~aL~~agi~~~~Id~li~~t~s~~~~~~~~a~~l~~~-Lgl~G~~~-~~-~~d-v~-~aC~gg~~AL~~A~ 132 (453)
.+...++.+++|+++|++++|||.+++...+. .+-..+.+. ||+.-... .+ .++ .+ .+|++-..+|..+.
T Consensus 270 ~~~~~~~i~~~L~~~gl~~~dId~~~~Hq~~~-----~~~d~~~~~llg~~~~~~~~~~~~~~~GNt~sasi~~~L~~~~ 344 (372)
T PRK07515 270 CPMVAEHIVEHLAENGLTPADVKRFWLHQANI-----NMNQLIGKKVLGRDATPEEAPVILDEYANTSSAGSIIAFHKHS 344 (372)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEECCCCH-----HHHHHHHHHhccCCCChhhceEeHHhcCCchhhHHHHHHHHHh
Confidence 34567889999999999999999998753222 222233444 66410111 11 122 22 35555555665553
Q ss_pred HHHHhCCCCCCeEEEEEe
Q 012909 133 NWVESASWDGRYGLVVCT 150 (453)
Q Consensus 133 ~~v~sg~~~~~~aLVv~~ 150 (453)
..+ .+|+++|+++.
T Consensus 345 ~~~----~~Gd~vll~~~ 358 (372)
T PRK07515 345 DDL----AAGDLGVICSF 358 (372)
T ss_pred ccC----CCCCEEEEEEe
Confidence 322 26788888765
No 187
>PRK06059 lipid-transfer protein; Provisional
Probab=76.87 E-value=20 Score=37.13 Aligned_cols=40 Identities=10% Similarity=0.087 Sum_probs=29.1
Q ss_pred HHHHHHHHHHcCCCcCCcCEEEEEcccCCCCCccHHHHHHHHhcc
Q 012909 62 LTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEK 106 (453)
Q Consensus 62 ~~Aa~~aL~~agi~~~~Id~li~~t~s~~~~~~~~a~~l~~~Lgl 106 (453)
..|++++++++|++|+|||.+.+..... .......+.||+
T Consensus 276 ~~a~~~a~~~agl~~~Did~~El~d~f~-----~~~l~~~e~lGl 315 (399)
T PRK06059 276 DQILDAAYAEAGIGPEDLSLAEVYDLST-----ALELDWYEHLGL 315 (399)
T ss_pred HHHHHHHHHHcCCCHHHCcEEeecccCh-----HHHHHHHHHcCC
Confidence 5789999999999999999998754321 222333477776
No 188
>PRK06064 acetyl-CoA acetyltransferase; Provisional
Probab=76.79 E-value=19 Score=37.09 Aligned_cols=79 Identities=11% Similarity=0.046 Sum_probs=44.9
Q ss_pred eechhHHhhhhCCCcCeeeEcccceEEecc-CCCCCH--HHHHHHHHHHHHHHcCCCcCCcCEEEEEcccCCCCCccHHH
Q 012909 22 CVLQEALEVHDGVSKGKYTVGLGQDCMAFC-SEVEDV--ISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKT 98 (453)
Q Consensus 22 ~v~~~~l~~~~g~~~~k~~~Gig~r~~av~-~~~ed~--~~la~~Aa~~aL~~agi~~~~Id~li~~t~s~~~~~~~~a~ 98 (453)
.+..++.++.++..+-++ .|.+....... ....+. ..-...|++++++++|++|+|||.+.+..... ....
T Consensus 219 vL~s~~~A~~~~~~~v~I-~g~g~~~~~~~~~~~~~~~~~~~~~~a~~~al~~aGi~~~did~~e~~d~ft-----~~~~ 292 (389)
T PRK06064 219 ILASEEKAKEYTDTPVWI-KASGQASDTIALHDRKDFTTLDAAVVAAEKAYKMAGIEPKDIDVAEVHDCFT-----IAEI 292 (389)
T ss_pred EEecHHHHHHhcCCCeEE-EEEEEecCcccccccccccccHHHHHHHHHHHHHcCCCHHHCCEEEecCCCc-----HHHH
Confidence 345556666655444433 45654432100 011121 22345799999999999999999998654322 1334
Q ss_pred HHHHHhcc
Q 012909 99 FLMQIFEK 106 (453)
Q Consensus 99 ~l~~~Lgl 106 (453)
...+.||+
T Consensus 293 ~~~e~lgl 300 (389)
T PRK06064 293 LAYEDLGF 300 (389)
T ss_pred HHHHHcCC
Confidence 45567776
No 189
>PRK12578 acetyl-CoA acetyltransferase; Provisional
Probab=76.55 E-value=9.8 Score=39.23 Aligned_cols=80 Identities=9% Similarity=0.013 Sum_probs=47.7
Q ss_pred eechhHHhhhhCCCcCeeeEcccceEEec-cCCCCCHHH--HHHHHHHHHHHHcCCCcCCcCEEEEEcccCCCCCccHHH
Q 012909 22 CVLQEALEVHDGVSKGKYTVGLGQDCMAF-CSEVEDVIS--MSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKT 98 (453)
Q Consensus 22 ~v~~~~l~~~~g~~~~k~~~Gig~r~~av-~~~~ed~~~--la~~Aa~~aL~~agi~~~~Id~li~~t~s~~~~~~~~a~ 98 (453)
.|..++.++..+.++-.+..|+++..-.. .....+... -...|++++++++|++|+|||.+.+..... ....
T Consensus 217 vl~s~e~A~~l~~~~~~~I~g~g~~~~~~~~~~~~~~~~~~~~~~a~~~al~~Agi~~~DiD~~ei~d~ft-----~~~l 291 (385)
T PRK12578 217 IFASEEKVKELKIDSPVWITGIGYANDYAYVARRGEWVGFKATQLAARQAYNMAKVTPNDIEVATVHDAFT-----IAEI 291 (385)
T ss_pred EEecHHHHHhcCCCCCeEEEEEEEecCcccccccccccccHHHHHHHHHHHHHcCCCHHHCCEEEecCcCh-----HHHH
Confidence 45666777777754433334666532110 011122223 345799999999999999999988754332 3334
Q ss_pred HHHHHhcc
Q 012909 99 FLMQIFEK 106 (453)
Q Consensus 99 ~l~~~Lgl 106 (453)
...+.||+
T Consensus 292 ~~le~lGl 299 (385)
T PRK12578 292 MGYEDLGF 299 (385)
T ss_pred HHHHHcCC
Confidence 45567776
No 190
>PRK08947 fadA 3-ketoacyl-CoA thiolase; Reviewed
Probab=75.56 E-value=27 Score=36.14 Aligned_cols=41 Identities=7% Similarity=0.074 Sum_probs=30.2
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEEEcccCCCCCccHHHHHHHHhcc
Q 012909 61 SLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEK 106 (453)
Q Consensus 61 a~~Aa~~aL~~agi~~~~Id~li~~t~s~~~~~~~~a~~l~~~Lgl 106 (453)
...|++++++++|++|+|||.+.+.-.. ........+.||+
T Consensus 284 ~~~a~~~al~~Agl~~~DId~~El~d~F-----~~~~l~~~e~lg~ 324 (387)
T PRK08947 284 PVPATQKALKRAGLSISDIDVFELNEAF-----AAQSLPCLKDLGL 324 (387)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEecccc-----hHHHHHHHHHcCC
Confidence 4678999999999999999999864322 2333444577776
No 191
>cd00828 elong_cond_enzymes "elongating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type I and II and polyketide synthases.They are characterized by the utlization of acyl carrier protein (ACP) thioesters as primer substrates, as well as the nature of their active site residues.
Probab=75.28 E-value=17 Score=37.56 Aligned_cols=79 Identities=10% Similarity=0.116 Sum_probs=46.7
Q ss_pred HHHHHHHHHHHHHHcCCCcCCcCEEEE-EcccCCCCCccHHHHHHHHhcccCCCCeeEEeeCC-----cChhHHHHHHHH
Q 012909 58 ISMSLTVVTSLLEKYKIDPTQIGRLEV-GSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTN-----ACYGGTAALFNC 131 (453)
Q Consensus 58 ~~la~~Aa~~aL~~agi~~~~Id~li~-~t~s~~~~~~~~a~~l~~~Lgl~G~~~~~~~dv~~-----aC~gg~~AL~~A 131 (453)
..-...|.+++|+++|++|++||.|.. +|.++. ..+.-...+.+.++..+ ..++...++. ..++|...+..+
T Consensus 273 ~~~~~~a~~~Al~~Agi~~~dId~i~~hgtgt~~-~D~~E~~ai~~~~~~~~-~~~~v~s~K~~~Gh~~~Asg~~~l~~~ 350 (407)
T cd00828 273 GKGIARAIRTALAKAGLSLDDLDVISAHGTSTPA-NDVAESRAIAEVAGALG-APLPVTAQKALFGHSKGAAGALQLIGA 350 (407)
T ss_pred hHHHHHHHHHHHHHcCCCHHHcCEEecccccCcc-ccHHHHHHHHHHHhccC-CCceeecccchhccchhhhhHHHHHHH
Confidence 355678899999999999999999884 444433 22334455566666421 2344444431 333444444445
Q ss_pred HHHHHhC
Q 012909 132 VNWVESA 138 (453)
Q Consensus 132 ~~~v~sg 138 (453)
...++.+
T Consensus 351 ~~~l~~~ 357 (407)
T cd00828 351 LQSLEHG 357 (407)
T ss_pred HHHHhcC
Confidence 5555554
No 192
>PRK07910 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=75.16 E-value=17 Score=37.98 Aligned_cols=46 Identities=11% Similarity=0.114 Sum_probs=33.5
Q ss_pred HHHHHHHHHHHHcCCCcCCcCEEEE-EcccCCCCCccHHHHHHHHhcc
Q 012909 60 MSLTVVTSLLEKYKIDPTQIGRLEV-GSETVIDKSKSIKTFLMQIFEK 106 (453)
Q Consensus 60 la~~Aa~~aL~~agi~~~~Id~li~-~t~s~~~~~~~~a~~l~~~Lgl 106 (453)
-..+|.+++|+++|++|+|||.+.. +|.|+. ..+.-...|.+.||.
T Consensus 287 ~~~~a~~~Al~~agi~~~did~ie~hgtgt~~-~D~~E~~Al~~~fg~ 333 (418)
T PRK07910 287 RAGHAMTRAIELAGLTPGDIDHVNAHATGTSV-GDVAEGKAINNALGG 333 (418)
T ss_pred HHHHHHHHHHHHhCCCHHHCCEEEcCCcCCCC-CCHHHHHHHHHHhCC
Confidence 3678999999999999999999984 444443 233445567777774
No 193
>PRK06954 acetyl-CoA acetyltransferase; Provisional
Probab=73.61 E-value=12 Score=38.87 Aligned_cols=59 Identities=14% Similarity=0.220 Sum_probs=35.3
Q ss_pred eechhHHhhhhCCCcCeeeEcccceEEeccCCCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEE
Q 012909 22 CVLQEALEVHDGVSKGKYTVGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEV 84 (453)
Q Consensus 22 ~v~~~~l~~~~g~~~~k~~~Gig~r~~av~~~~ed~~~la~~Aa~~aL~~agi~~~~Id~li~ 84 (453)
.|..++.++.+|.+|-....|.+ .... .+ .+...-...|++++|+++|++|+|||.+.+
T Consensus 262 vl~s~~~a~~~~~~p~~~i~g~~--~~~~-~~-~~~~~~~~~a~~~al~~agl~~~Did~~ei 320 (397)
T PRK06954 262 VMMRASTAKRLGLAPLARVVGHS--TFAQ-AP-SKFTTAPVGAIRKLFEKNGWRAAEVDLFEI 320 (397)
T ss_pred EEecHHHHHHCCCCceEEEEEEE--eccc-Cc-ccccchHHHHHHHHHHHcCCCHHHCCEEeh
Confidence 34455666666665542223322 1111 11 112224468999999999999999999964
No 194
>PRK07937 lipid-transfer protein; Provisional
Probab=73.26 E-value=28 Score=35.63 Aligned_cols=117 Identities=9% Similarity=-0.017 Sum_probs=59.2
Q ss_pred eechhHHhhhhCCCcCeeeEcccceEEeccCCCCCHHHHHHHHHHHHHHH-cCCCcCCcCEEEEEcccCCCCCccHHHHH
Q 012909 22 CVLQEALEVHDGVSKGKYTVGLGQDCMAFCSEVEDVISMSLTVVTSLLEK-YKIDPTQIGRLEVGSETVIDKSKSIKTFL 100 (453)
Q Consensus 22 ~v~~~~l~~~~g~~~~k~~~Gig~r~~av~~~~ed~~~la~~Aa~~aL~~-agi~~~~Id~li~~t~s~~~~~~~~a~~l 100 (453)
.|..++.++..+.+|-++ .|++...-.......|.. ...+++.++++ +|++|+|||.+.+--.. .......
T Consensus 212 vl~s~~~A~~l~~~pv~I-~g~~~~~~~~~~~~~d~~--~~~~~~~a~~~aAgi~~~diD~~Ei~D~F-----~~~~l~~ 283 (352)
T PRK07937 212 VLAAGDRARELRERPAWI-TGIEHRIESPSLGARDLT--RSPSTALAAEAATGGDAGGVDVAELHAPF-----THQELIL 283 (352)
T ss_pred EEecHHHHHHcCCCcEEE-EEEEEeeCCccccccccc--cHHHHHHHHHHhcCCCHHHCCEEEEeCCC-----hHHHHHH
Confidence 456667777777666444 344442110000111111 13344455555 59999999999875432 2334455
Q ss_pred HHHhcccCC--CCeeEEeeC---CcChhHHHHHHHHHHHHHhCCCCCCeEEEEE
Q 012909 101 MQIFEKYGN--TDIEGVDST---NACYGGTAALFNCVNWVESASWDGRYGLVVC 149 (453)
Q Consensus 101 ~~~Lgl~G~--~~~~~~dv~---~aC~gg~~AL~~A~~~v~sg~~~~~~aLVv~ 149 (453)
.+.||+.|. -|..+=-+. -+| +|+.-+.-+...|.... .+++|+.+
T Consensus 284 ~e~lGl~g~~pvN~~GG~l~ghp~ga-tG~~~~~e~~~QL~g~~--a~~~l~~~ 334 (352)
T PRK07937 284 REALGLGDKTKVNPSGGALAANPMFA-AGLERIGEAARHIWDGS--ARRALAHA 334 (352)
T ss_pred HHHcCCCCCCCcCCCccchhcCchhH-HHHHHHHHHHHHHhccC--CCEEEEec
Confidence 688887331 111111111 133 34444555555565553 37888875
No 195
>PRK04262 hypothetical protein; Provisional
Probab=72.06 E-value=12 Score=37.97 Aligned_cols=91 Identities=12% Similarity=0.119 Sum_probs=55.7
Q ss_pred HHHHHHHHHHHHHHcCCCcCCcCEEEEEcccCCCCCccHHHHHHHHhcccCCCC-eeE---E-eeC-CcChhHHHHHHHH
Q 012909 58 ISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTD-IEG---V-DST-NACYGGTAALFNC 131 (453)
Q Consensus 58 ~~la~~Aa~~aL~~agi~~~~Id~li~~t~s~~~~~~~~a~~l~~~Lgl~G~~~-~~~---~-dv~-~aC~gg~~AL~~A 131 (453)
.....++.+++|+++|++++|||.+++..- .+.+-..+++.||+ +.. +.. + +++ .++++-..+|..+
T Consensus 208 ~~~~~~~i~~~L~~~gl~~~dId~~v~Hq~-----n~~~~~~~~~~Lgl--~~ek~~~~~~~~~~GNt~sAsi~~~L~~~ 280 (347)
T PRK04262 208 FKHIISAAKGLMEKLGLKPSDYDYAVFHQP-----NGKFPLRVAKMLGF--TKEQVKPGLLTPYIGNTYSGSALLGLAAV 280 (347)
T ss_pred HHHHHHHHHHHHHHhCcCHHHhceeecCCC-----chHHHHHHHHHcCC--CHHHhhccchhhhhCChHHHHHHHHHHHH
Confidence 356678899999999999999999987531 23344567888898 322 221 1 232 2444444555554
Q ss_pred HHHHHhCCCCCCeEEEEEeecc--ceeeee
Q 012909 132 VNWVESASWDGRYGLVVCTDTA--AVAMLI 159 (453)
Q Consensus 132 ~~~v~sg~~~~~~aLVv~~d~~--AvA~Ll 159 (453)
..- .. +|+++|+++.-.- +.++++
T Consensus 281 ~~~--~~--~Gd~vll~~~G~G~~~~~~~~ 306 (347)
T PRK04262 281 LDV--AK--PGDRILVVSFGSGAGSDAFSI 306 (347)
T ss_pred HHh--CC--CCCEEEEEecCCCcceeeEEE
Confidence 432 22 6788888865443 334444
No 196
>PRK07314 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=69.64 E-value=17 Score=37.60 Aligned_cols=77 Identities=13% Similarity=0.170 Sum_probs=45.6
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEE-EcccCCCCCccHHHHHHHHhcccCCCCeeEEee----CC-cChhHHHHHHHHHHH
Q 012909 61 SLTVVTSLLEKYKIDPTQIGRLEV-GSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDS----TN-ACYGGTAALFNCVNW 134 (453)
Q Consensus 61 a~~Aa~~aL~~agi~~~~Id~li~-~t~s~~~~~~~~a~~l~~~Lgl~G~~~~~~~dv----~~-aC~gg~~AL~~A~~~ 134 (453)
...|++++|+++|++|+|||.+.. +|.|+.. .+.-..-+.+.+|.. ..+++.-.+ ++ -+++|+..+..+...
T Consensus 278 ~~~a~~~Al~~agi~~~dId~v~~hgtgt~~~-d~~E~~al~~~~~~~-~~~~~v~s~k~~~Gh~~~AsG~~~~i~~~l~ 355 (411)
T PRK07314 278 AARAMKLALKDAGINPEDIDYINAHGTSTPAG-DKAETQAIKRVFGEH-AYKVAVSSTKSMTGHLLGAAGAVEAIFSVLA 355 (411)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEccccCCccc-cHHHHHHHHHHhccc-CCCCeeECccchhchhHHHHHHHHHHHHHHH
Confidence 457899999999999999999984 4544332 233334566666631 123333322 22 344555555555666
Q ss_pred HHhCC
Q 012909 135 VESAS 139 (453)
Q Consensus 135 v~sg~ 139 (453)
++.+.
T Consensus 356 l~~~~ 360 (411)
T PRK07314 356 IRDQV 360 (411)
T ss_pred HhCCC
Confidence 66553
No 197
>PRK08722 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=68.17 E-value=18 Score=37.84 Aligned_cols=78 Identities=10% Similarity=0.076 Sum_probs=46.3
Q ss_pred HHHHHHHHHHHHcCCCcCCcCEEEE-EcccCCCCCccHHHHHHHHhcccCCCCeeEEeeCC---c--ChhHHHHHHHHHH
Q 012909 60 MSLTVVTSLLEKYKIDPTQIGRLEV-GSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTN---A--CYGGTAALFNCVN 133 (453)
Q Consensus 60 la~~Aa~~aL~~agi~~~~Id~li~-~t~s~~~~~~~~a~~l~~~Lgl~G~~~~~~~dv~~---a--C~gg~~AL~~A~~ 133 (453)
....|.+++|+++|++|+|||.|.. +|.|+. ..+.-..-|.+.+|-.+...++.-.++. - .++|+..+..+.-
T Consensus 279 ~~~~a~~~Al~~agi~~~did~ie~hgtgt~~-~D~~E~~al~~~fg~~~~~~~~v~s~K~~~GH~~~AaG~~~~~~~~l 357 (414)
T PRK08722 279 GGALAMEAAMRDAGVTGEQIGYVNAHGTSTPA-GDVAEIKGIKRALGEAGSKQVLVSSTKSMTGHLLGAAGSVEAIITVM 357 (414)
T ss_pred HHHHHHHHHHHHcCCCHHHcCEEEccCccCCC-CCHHHHHHHHHHhcccCCCCceeeCcccccccchHHHHHHHHHHHHH
Confidence 4577899999999999999999974 444443 2334455677777642113355444441 2 3333444444444
Q ss_pred HHHhC
Q 012909 134 WVESA 138 (453)
Q Consensus 134 ~v~sg 138 (453)
.++.+
T Consensus 358 ~l~~~ 362 (414)
T PRK08722 358 SLVDQ 362 (414)
T ss_pred HHhcC
Confidence 55555
No 198
>cd00832 CLF Chain-length factor (CLF) is a factor required for polyketide chain initiation of aromatic antibiotic-producing polyketide synthases (PKSs) of filamentous bacteria. CLFs have been shown to have decarboxylase activity towards malonyl-acyl carrier protein (ACP). CLFs are similar to other elongation ketosynthase domains, but their active site cysteine is replaced by a conserved glutamine.
Probab=67.70 E-value=31 Score=35.81 Aligned_cols=78 Identities=6% Similarity=0.026 Sum_probs=47.0
Q ss_pred HHHHHHHHHHHHHHcCCCcCCcCEEEE-EcccCCCCCccHHHHHHHHhcccCCCCeeEEeeCC-----cChhHHHHHHHH
Q 012909 58 ISMSLTVVTSLLEKYKIDPTQIGRLEV-GSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTN-----ACYGGTAALFNC 131 (453)
Q Consensus 58 ~~la~~Aa~~aL~~agi~~~~Id~li~-~t~s~~~~~~~~a~~l~~~Lgl~G~~~~~~~dv~~-----aC~gg~~AL~~A 131 (453)
..-...|.+++|+++|++|++||.|.. +|.|+. ..+.-..-|.+.||. ..++...++. .+++|...+..+
T Consensus 269 ~~~~~~a~~~al~~ag~~~~~i~~v~~hgtgt~~-~D~~E~~al~~~fg~---~~~pv~s~K~~~Gh~~~aaG~~~l~~~ 344 (399)
T cd00832 269 PPGLARAIRLALADAGLTPEDVDVVFADAAGVPE-LDRAEAAALAAVFGP---RGVPVTAPKTMTGRLYAGGAPLDVATA 344 (399)
T ss_pred HHHHHHHHHHHHHHcCCCHHHccEEEeccCcCCC-CCHHHHHHHHHHhCC---CCCceeCCCchhcchHHHHHHHHHHHH
Confidence 344568899999999999999999884 444443 233444556777774 3334333331 244444455555
Q ss_pred HHHHHhCC
Q 012909 132 VNWVESAS 139 (453)
Q Consensus 132 ~~~v~sg~ 139 (453)
...++.+.
T Consensus 345 ~l~l~~~~ 352 (399)
T cd00832 345 LLALRDGV 352 (399)
T ss_pred HHHHhCCC
Confidence 55566553
No 199
>TIGR02446 FadI fatty oxidation complex, beta subunit FadI. This subunit of the FadJI complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit, and YfcY. This protein is almost always located adjacent to FadJ (TIGR02440). The FadJI complex is needed for anaerobic beta-oxidation of short-chain fatty acids in E. coli.
Probab=67.40 E-value=17 Score=38.20 Aligned_cols=61 Identities=7% Similarity=0.048 Sum_probs=36.5
Q ss_pred eechhHHhhhhCCCcC-eeeEcccceEEeccCCCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEEc
Q 012909 22 CVLQEALEVHDGVSKG-KYTVGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGS 86 (453)
Q Consensus 22 ~v~~~~l~~~~g~~~~-k~~~Gig~r~~av~~~~ed~~~la~~Aa~~aL~~agi~~~~Id~li~~t 86 (453)
.|..++.++..+.+|- ++ .|.+... . .+..+...-...|++++++++|++|+|||.+.+.-
T Consensus 277 il~se~~A~~l~~~p~~~i-~~~~~~~--~-~~~~~~~~~~~~a~~~al~~Agl~~~Did~~Ei~d 338 (430)
T TIGR02446 277 ILMREGRAKELGMEPLGYI-RSYAFTA--I-DVWQDMLMGPSYATPLALQRAGLALSDLTLIDMHE 338 (430)
T ss_pred EEecHHHHHHcCCCceEEE-EEEEeec--c-CchHhhcccHHHHHHHHHHHcCCCHHHCCEEEecc
Confidence 4455566666665553 33 2343321 1 11111111225799999999999999999998754
No 200
>PF02801 Ketoacyl-synt_C: Beta-ketoacyl synthase, C-terminal domain; InterPro: IPR014031 Beta-ketoacyl-ACP synthase 2.3.1.41 from EC (KAS) [] is the enzyme that catalyzes the condensation of malonyl-ACP with the growing fatty acid chain. It is found as a component of a number of enzymatic systems, including fatty acid synthetase (FAS), which catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH; the multi-functional 6-methysalicylic acid synthase (MSAS) from Penicillium patulum [], which is involved in the biosynthesis of a polyketide antibiotic; polyketide antibiotic synthase enzyme systems; Emericella nidulans multifunctional protein Wa, which is involved in the biosynthesis of conidial green pigment; Rhizobium nodulation protein nodE, which probably acts as a beta-ketoacyl synthase in the synthesis of the nodulation Nod factor fatty acyl chain; and yeast mitochondrial protein CEM1. The condensation reaction is a two step process, first the acyl component of an activated acyl primer is transferred to a cysteine residue of the enzyme and is then condensed with an activated malonyl donor with the concomitant release of carbon dioxide. This entry represents the C-terminal domain of beta-ketoacyl-ACP synthases. The active site is contained in a cleft betweeen N- and C-terminal domains, with residues from both domains contributing to substrate binding and catalysis [].; PDB: 2UV8_B 3HMJ_A 2VKZ_C 4EWG_A 1TQY_H 1E5M_A 1J3N_B 2VZ8_A 2VZ9_B 3O04_A ....
Probab=67.34 E-value=21 Score=30.16 Aligned_cols=22 Identities=27% Similarity=0.270 Sum_probs=14.4
Q ss_pred CCCccCccEEEecCcchHHHHH
Q 012909 225 QFSMLDVDYFVFHSPYNKLVQK 246 (453)
Q Consensus 225 ~~~~~d~d~~v~H~p~~km~~k 246 (453)
+++++|||++..|-...+..+.
T Consensus 39 gi~~~~I~~i~~hg~Gt~~~D~ 60 (119)
T PF02801_consen 39 GISPEDIDYIEAHGTGTPLGDA 60 (119)
T ss_dssp TS-GGGEEEEE----SSHHHHH
T ss_pred ccccccceeeeeeccccccchh
Confidence 5889999999999999887655
No 201
>COG0332 FabH 3-oxoacyl-[acyl-carrier-protein]
Probab=65.94 E-value=8.4 Score=38.89 Aligned_cols=85 Identities=13% Similarity=0.041 Sum_probs=52.8
Q ss_pred CHHHHHHHHHHHHHHHcCCCcCCcCEEEEEcccCCCCCccHHHHHHHHhcccCCCCeeEEeeCC--cC--hhHHHHHHHH
Q 012909 56 DVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTN--AC--YGGTAALFNC 131 (453)
Q Consensus 56 d~~~la~~Aa~~aL~~agi~~~~Id~li~~t~s~~~~~~~~a~~l~~~Lgl~G~~~~~~~dv~~--aC--~gg~~AL~~A 131 (453)
-++.+..++.+++|++++++++|||.++..- ....+-..+.++||+ +..-....+.. .+ ++-..||..
T Consensus 220 ~av~~~~~~~~~~L~~~~l~~~dId~~vpHQ-----an~ri~~~i~~~l~~--~~~k~~~~~~~yGNtsaAsiplaL~~- 291 (323)
T COG0332 220 FAVRAMPKAIEEVLEKAGLTPEDIDWFVPHQ-----ANLRIIEAIAKKLGI--PEEKVVVTVDKYGNTSAASIPLALDE- 291 (323)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEcccc-----ccHHHHHHHHHHcCC--CHHHHhhHHHHhcccccchHHHHHHH-
Confidence 3578888999999999999999999998643 233455667788887 44444444432 12 222223333
Q ss_pred HHHHHhCCC-CCCeEEEEEe
Q 012909 132 VNWVESASW-DGRYGLVVCT 150 (453)
Q Consensus 132 ~~~v~sg~~-~~~~aLVv~~ 150 (453)
.++.|.. +|..+|+++.
T Consensus 292 --~~~~g~ik~Gd~ill~~f 309 (323)
T COG0332 292 --ALREGRIKPGDLVLLEAF 309 (323)
T ss_pred --HhhhCCCCCCCEEEEEee
Confidence 3344432 5667776653
No 202
>PRK06289 acetyl-CoA acetyltransferase; Provisional
Probab=65.87 E-value=21 Score=37.04 Aligned_cols=41 Identities=7% Similarity=0.025 Sum_probs=30.9
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEEEcccCCCCCccHHHHHHHHhcc
Q 012909 61 SLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEK 106 (453)
Q Consensus 61 a~~Aa~~aL~~agi~~~~Id~li~~t~s~~~~~~~~a~~l~~~Lgl 106 (453)
...|++++++++|++|+|||.+.+.-.. ........+.||+
T Consensus 278 ~~~aa~~a~~~Agi~~~Didv~el~D~f-----a~~~l~~le~lGl 318 (403)
T PRK06289 278 VRQAVLDAYRRAGVGLDDLDGFEVHDCF-----TPSEYLAIDHIGL 318 (403)
T ss_pred HHHHHHHHHHHcCCCHHHCeEEeeeccc-----hHHHHHHHHHcCC
Confidence 4679999999999999999999875432 2334455677776
No 203
>PRK05952 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=65.82 E-value=29 Score=35.83 Aligned_cols=47 Identities=13% Similarity=0.323 Sum_probs=32.4
Q ss_pred HHHHHHHHHHHHHHcCCCcCCcCEEEE-EcccCCCCCccHHHHHHHHhc
Q 012909 58 ISMSLTVVTSLLEKYKIDPTQIGRLEV-GSETVIDKSKSIKTFLMQIFE 105 (453)
Q Consensus 58 ~~la~~Aa~~aL~~agi~~~~Id~li~-~t~s~~~~~~~~a~~l~~~Lg 105 (453)
.....+|.+++|+++|++|+|||.|.. +|.|+. ..+.-...|.+.+|
T Consensus 253 ~~~~~~ai~~Al~~agi~p~dId~i~~hgtgt~~-~D~~E~~al~~~fg 300 (381)
T PRK05952 253 GKSAIAAIQQCLARSGLTPEDIDYIHAHGTATRL-NDQREANLIQALFP 300 (381)
T ss_pred HHHHHHHHHHHHHHhCCCHHHeeEEEccCCCCCC-CcHHHHHHHHHHcC
Confidence 345689999999999999999999984 554443 12223344556655
No 204
>PRK08142 acetyl-CoA acetyltransferase; Provisional
Probab=64.96 E-value=8.1 Score=40.04 Aligned_cols=79 Identities=11% Similarity=0.028 Sum_probs=47.0
Q ss_pred eechhHHhhhhCCCcCeeeEcccceEEeccCCCCC-HHHHHHHHHHHHHHHcCCCcCCcCEEEEEcccCCCCCccHHHHH
Q 012909 22 CVLQEALEVHDGVSKGKYTVGLGQDCMAFCSEVED-VISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFL 100 (453)
Q Consensus 22 ~v~~~~l~~~~g~~~~k~~~Gig~r~~av~~~~ed-~~~la~~Aa~~aL~~agi~~~~Id~li~~t~s~~~~~~~~a~~l 100 (453)
.|..++.++..+.++-++ .|.++..-.......+ .......|++++++++|++|+|||.+.+..+.+. .....
T Consensus 218 vl~s~~~A~~l~~~~v~I-~g~~~~~~~~~~~~~~~~~~~~~~aa~~a~~~AGi~~~did~~elyD~Fs~-----~~~~~ 291 (388)
T PRK08142 218 VVVRPEIARSLKRPLVKV-LGAGEAIKGQMGGKVDLTYSGAAWSGPAAFAEAGVTPADIKYASIYDSFTI-----TVLMQ 291 (388)
T ss_pred EEecHHHHhhcCCCCEEE-EEEEEecCCccccCcccccHHHHHHHHHHHHHcCCCHHHCCEEEEeccchH-----HHHHH
Confidence 456677777666544444 3555432111011112 2344568999999999999999999887654332 23334
Q ss_pred HHHhcc
Q 012909 101 MQIFEK 106 (453)
Q Consensus 101 ~~~Lgl 106 (453)
.+.||+
T Consensus 292 ~E~lGl 297 (388)
T PRK08142 292 LEDLGF 297 (388)
T ss_pred HHHcCC
Confidence 466776
No 205
>cd00834 KAS_I_II Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS), type I and II. KASs are responsible for the elongation steps in fatty acid biosynthesis. KASIII catalyses the initial condensation and KAS I and II catalyze further elongation steps by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP.
Probab=64.51 E-value=17 Score=37.31 Aligned_cols=80 Identities=9% Similarity=0.139 Sum_probs=50.3
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCEEEE-EcccCCCCCccHHHHHHHHhcccCCCCeeEEeeC-----CcChhHHHHHHHHH
Q 012909 59 SMSLTVVTSLLEKYKIDPTQIGRLEV-GSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDST-----NACYGGTAALFNCV 132 (453)
Q Consensus 59 ~la~~Aa~~aL~~agi~~~~Id~li~-~t~s~~~~~~~~a~~l~~~Lgl~G~~~~~~~dv~-----~aC~gg~~AL~~A~ 132 (453)
.-..++++++|+++|++++|||.+.. +|.++. ..+.-+.-+...++.. ...++...++ ..+++|+..|..+.
T Consensus 275 ~~~~~~i~~al~~agi~~~dId~v~~h~tgt~~-~d~~E~~al~~~~~~~-~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~ 352 (406)
T cd00834 275 EGAARAMRAALADAGLSPEDIDYINAHGTSTPL-NDAAESKAIKRVFGEH-AKKVPVSSTKSMTGHLLGAAGAVEAIATL 352 (406)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEecccccCcc-ccHHHHHHHHHHhccc-CCCCceeCcchhhccchhhhhHHHHHHHH
Confidence 44567899999999999999999985 343432 2233344455555531 1233333332 25677777777788
Q ss_pred HHHHhCCC
Q 012909 133 NWVESASW 140 (453)
Q Consensus 133 ~~v~sg~~ 140 (453)
..++.+..
T Consensus 353 ~~l~~~~i 360 (406)
T cd00834 353 LALRDGVL 360 (406)
T ss_pred HHHhcCCc
Confidence 78877744
No 206
>PRK06157 acetyl-CoA acetyltransferase; Validated
Probab=63.90 E-value=34 Score=35.49 Aligned_cols=79 Identities=10% Similarity=-0.068 Sum_probs=46.3
Q ss_pred eechhHHhhhhCC-CcCeeeEcccceEE---eccCCCCCHHHH--HHHHHHHHHHHcCCC--cCCcCEEEEEcccCCCCC
Q 012909 22 CVLQEALEVHDGV-SKGKYTVGLGQDCM---AFCSEVEDVISM--SLTVVTSLLEKYKID--PTQIGRLEVGSETVIDKS 93 (453)
Q Consensus 22 ~v~~~~l~~~~g~-~~~k~~~Gig~r~~---av~~~~ed~~~l--a~~Aa~~aL~~agi~--~~~Id~li~~t~s~~~~~ 93 (453)
.|..++.++..+. ++-++ .|.+...- .....+.+..+| ...|++++++++|++ ++|||.+.+.-..
T Consensus 224 vl~s~~~A~~l~~~~~v~I-~g~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~a~~~AGl~~~~~Did~~Ei~D~F----- 297 (398)
T PRK06157 224 IVTTPEIARALGKKDPVYV-KALQLAVSNGWELQYNGWDGSYFPTTRIAARKAYREAGITDPREELSMAEVHDCF----- 297 (398)
T ss_pred EEecHHHHHhhCCCCCeEE-EEEEEecccccccccccccccccHHHHHHHHHHHHHcCCCCchhcCCEEEEecCC-----
Confidence 4566677777765 55555 34443210 000112233333 567999999999997 7999999875322
Q ss_pred ccHHHHHHHHhcc
Q 012909 94 KSIKTFLMQIFEK 106 (453)
Q Consensus 94 ~~~a~~l~~~Lgl 106 (453)
........+.||+
T Consensus 298 s~~~l~~~e~lGl 310 (398)
T PRK06157 298 SITELVTMEDLGL 310 (398)
T ss_pred hHHHHHHHHHcCC
Confidence 2334455677776
No 207
>PRK06066 acetyl-CoA acetyltransferase; Provisional
Probab=63.63 E-value=15 Score=38.16 Aligned_cols=77 Identities=9% Similarity=0.032 Sum_probs=46.9
Q ss_pred eechhHHhhhhCCCcCeeeEcccceE--EeccCCCCCHHHHH--HHHHHHHHHHcCCC--cCCcCEEEEEcccCCCCCcc
Q 012909 22 CVLQEALEVHDGVSKGKYTVGLGQDC--MAFCSEVEDVISMS--LTVVTSLLEKYKID--PTQIGRLEVGSETVIDKSKS 95 (453)
Q Consensus 22 ~v~~~~l~~~~g~~~~k~~~Gig~r~--~av~~~~ed~~~la--~~Aa~~aL~~agi~--~~~Id~li~~t~s~~~~~~~ 95 (453)
.|..++.++..+.+|-++ .|++... ..+ ..++...+. ..|++++++++|++ ++|||.+.+.-. ...
T Consensus 218 vl~s~~~a~~l~~~pv~I-~g~g~~~~~~~~--~~~~~~~~~~~~~Aa~~a~~~AGi~~p~~DiD~~ei~D~-----Ft~ 289 (385)
T PRK06066 218 VLASEEVAKKLTDDPVWI-KGIGWSTESSNL--ETAELGKANYMRIAADMAYKMAGIESPRKEVDAAEVDDR-----YSY 289 (385)
T ss_pred EEeCHHHHHhcCCCCEEE-EEEEEecCCccc--ccccccccHHHHHHHHHHHHHcCCCCCHHHCcEEEEecC-----ChH
Confidence 456667777666666554 3555432 111 122333333 37999999999997 699999987532 223
Q ss_pred HHHHHHHHhcc
Q 012909 96 IKTFLMQIFEK 106 (453)
Q Consensus 96 ~a~~l~~~Lgl 106 (453)
......+.||+
T Consensus 290 ~~l~~~e~lG~ 300 (385)
T PRK06066 290 KELQHIEALRL 300 (385)
T ss_pred HHHHHHHHcCC
Confidence 34455667776
No 208
>cd00833 PKS polyketide synthases (PKSs) polymerize simple fatty acids into a large variety of different products, called polyketides, by successive decarboxylating Claisen condensations. PKSs can be divided into 2 groups, modular type I PKSs consisting of one or more large multifunctional proteins and iterative type II PKSs, complexes of several monofunctional subunits.
Probab=63.07 E-value=50 Score=34.02 Aligned_cols=81 Identities=16% Similarity=0.173 Sum_probs=46.5
Q ss_pred HHHHHHHHHHHHHHcCCCcCCcCEEEE-EcccCCCCCccHHHHHHHHhcccCC--CCeeEEeeC----C-cChhHHHHHH
Q 012909 58 ISMSLTVVTSLLEKYKIDPTQIGRLEV-GSETVIDKSKSIKTFLMQIFEKYGN--TDIEGVDST----N-ACYGGTAALF 129 (453)
Q Consensus 58 ~~la~~Aa~~aL~~agi~~~~Id~li~-~t~s~~~~~~~~a~~l~~~Lgl~G~--~~~~~~dv~----~-aC~gg~~AL~ 129 (453)
..-...|++++|+++|++|+|||.+.. +|.++. ....-..-|...++-.+. ..++...++ + ..++|+..|.
T Consensus 278 ~~~~~~a~~~al~~Agi~~~did~i~~hgtgt~~-~D~~E~~al~~~f~~~~~~~~~~~v~s~k~~~Gh~~~aag~~~l~ 356 (421)
T cd00833 278 GEAQAALIRRAYARAGVDPSDIDYVEAHGTGTPL-GDPIEVEALAKVFGGSRSADQPLLIGSVKSNIGHLEAAAGLAGLI 356 (421)
T ss_pred HHHHHHHHHHHHHHhCCCHHHCcEEEeeCCCCCC-CCHHHHHHHHHHHhccCCCCCceeeecCcCccccchhhhHHHHHH
Confidence 455568999999999999999999985 444332 122333455556553110 123333332 1 2344455555
Q ss_pred HHHHHHHhCC
Q 012909 130 NCVNWVESAS 139 (453)
Q Consensus 130 ~A~~~v~sg~ 139 (453)
.+...++.+.
T Consensus 357 ~~~~~l~~~~ 366 (421)
T cd00833 357 KVVLALEHGV 366 (421)
T ss_pred HHHHHHhcCC
Confidence 5666666654
No 209
>PRK09185 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed
Probab=62.09 E-value=22 Score=36.70 Aligned_cols=74 Identities=12% Similarity=0.225 Sum_probs=44.2
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEE-EcccCCCCCccHHHHHHHHhcccCCCCeeEEeeC-----CcChhHHHHHHHHHHH
Q 012909 61 SLTVVTSLLEKYKIDPTQIGRLEV-GSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDST-----NACYGGTAALFNCVNW 134 (453)
Q Consensus 61 a~~Aa~~aL~~agi~~~~Id~li~-~t~s~~~~~~~~a~~l~~~Lgl~G~~~~~~~dv~-----~aC~gg~~AL~~A~~~ 134 (453)
..+|.+++|+++|++|+|||.+.. +|.|+.. .+.=..-|.+.+|- +.+.-.++ ..+++|...+..+...
T Consensus 262 ~~~a~~~Al~~Agl~~~dId~v~~hgtgt~~~-D~~E~~al~~~f~~----~~pv~s~K~~~Gh~~~AaG~~~l~~~~~~ 336 (392)
T PRK09185 262 AILAMQQALADAGLAPADIGYINLHGTATPLN-DAMESRAVAAVFGD----GVPCSSTKGLTGHTLGAAGAVEAAICWLA 336 (392)
T ss_pred HHHHHHHHHHHcCCCHHHccEEEeCCCCCcCC-CHHHHHHHHHHhCC----CCceeCCCcccccChhhcchHHHHHHHHH
Confidence 358999999999999999999884 4444431 22333456666663 22222222 2444555555555555
Q ss_pred HHhCC
Q 012909 135 VESAS 139 (453)
Q Consensus 135 v~sg~ 139 (453)
++.+.
T Consensus 337 l~~~~ 341 (392)
T PRK09185 337 LRHGL 341 (392)
T ss_pred HhcCC
Confidence 66553
No 210
>PLN02787 3-oxoacyl-[acyl-carrier-protein] synthase II
Probab=61.06 E-value=21 Score=38.66 Aligned_cols=75 Identities=11% Similarity=0.167 Sum_probs=45.0
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEE-EEcccCCCCCccHHHHHHHHhcccCCCCeeEEeeC----C-cChhHHHHHHHHHHH
Q 012909 61 SLTVVTSLLEKYKIDPTQIGRLE-VGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDST----N-ACYGGTAALFNCVNW 134 (453)
Q Consensus 61 a~~Aa~~aL~~agi~~~~Id~li-~~t~s~~~~~~~~a~~l~~~Lgl~G~~~~~~~dv~----~-aC~gg~~AL~~A~~~ 134 (453)
...|.+++|+++|++|+|||.|. .||.|+.. -+.=..-|.+.||- .+.++.-.++ + -+++|...+..+...
T Consensus 407 ~~~am~~AL~~AGl~p~dIdyInaHGTGT~~g-D~~E~~Ai~~~Fg~--~~~~pV~S~Ks~iGH~~gAAGa~eli~~~la 483 (540)
T PLN02787 407 VILCIEKALAQSGVSKEDVNYINAHATSTKAG-DLKEYQALMRCFGQ--NPELRVNSTKSMIGHLLGAAGAVEAIATVQA 483 (540)
T ss_pred HHHHHHHHHHHcCCCHHHCcEEEccCccCCCC-CHHHHHHHHHHhCC--CCCceeeCCCCCcCCCcccchHHHHHHHHHH
Confidence 45789999999999999999987 45555532 22334456677774 3334443333 1 333444444444555
Q ss_pred HHhC
Q 012909 135 VESA 138 (453)
Q Consensus 135 v~sg 138 (453)
++.|
T Consensus 484 l~~g 487 (540)
T PLN02787 484 IRTG 487 (540)
T ss_pred HhcC
Confidence 6555
No 211
>PRK08170 acetyl-CoA acetyltransferase; Provisional
Probab=60.75 E-value=46 Score=34.90 Aligned_cols=26 Identities=15% Similarity=0.293 Sum_probs=23.1
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEEEc
Q 012909 61 SLTVVTSLLEKYKIDPTQIGRLEVGS 86 (453)
Q Consensus 61 a~~Aa~~aL~~agi~~~~Id~li~~t 86 (453)
...|++++++++|++|+|||.+.+.-
T Consensus 309 ~~~a~~~al~~aGl~~~did~~ei~d 334 (426)
T PRK08170 309 PVHAATPLLQRHGLTLEDLDLWEINE 334 (426)
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEecc
Confidence 46899999999999999999998743
No 212
>PRK09116 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=60.40 E-value=55 Score=34.04 Aligned_cols=46 Identities=15% Similarity=0.169 Sum_probs=33.2
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCEEE-EEcccCCCCCccHHHHHHHHhc
Q 012909 59 SMSLTVVTSLLEKYKIDPTQIGRLE-VGSETVIDKSKSIKTFLMQIFE 105 (453)
Q Consensus 59 ~la~~Aa~~aL~~agi~~~~Id~li-~~t~s~~~~~~~~a~~l~~~Lg 105 (453)
+-...+.+++|++++++|+|||.+. .+|.|+. ..+.-...|.+.+|
T Consensus 275 ~~~~~ai~~AL~~Agi~p~dId~I~~Hgtgt~~-~D~~E~~Ai~~~fg 321 (405)
T PRK09116 275 ETMQIAMELALKDAGLAPEDIGYVNAHGTATDR-GDIAESQATAAVFG 321 (405)
T ss_pred HHHHHHHHHHHHHhCCCHHHcCEEECcCccCCC-CCHHHHHHHHHHhC
Confidence 3345889999999999999999997 4555543 23344556777776
No 213
>PTZ00050 3-oxoacyl-acyl carrier protein synthase; Provisional
Probab=60.23 E-value=31 Score=36.03 Aligned_cols=79 Identities=10% Similarity=0.081 Sum_probs=44.5
Q ss_pred HHHHHHHHHHHHH-cCCCcCCcCEEEE-EcccCCCCCccHHHHHHHHhcccCCCCeeEEeeC-----CcChhHHHHHHHH
Q 012909 59 SMSLTVVTSLLEK-YKIDPTQIGRLEV-GSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDST-----NACYGGTAALFNC 131 (453)
Q Consensus 59 ~la~~Aa~~aL~~-agi~~~~Id~li~-~t~s~~~~~~~~a~~l~~~Lgl~G~~~~~~~dv~-----~aC~gg~~AL~~A 131 (453)
.-...|++++|++ +|++|+|||.|.. +|.++.. .+.-..-+.+.+|-.....++.-.++ .-.++|...+..+
T Consensus 283 ~~~~~ai~~Al~~~Agi~~~dId~ie~hgtgt~~~-D~~E~~al~~~~~~~~~~~~~v~s~K~~~GH~~~AaG~~~l~~~ 361 (421)
T PTZ00050 283 RGARRCMENALKDGANININDVDYVNAHATSTPIG-DKIELKAIKKVFGDSGAPKLYVSSTKGGLGHLLGAAGAVESIVT 361 (421)
T ss_pred HHHHHHHHHHHHhccCCChhhCCEEECCCccCCCC-CHHHHHHHHHHhccccCCCceEECccccccccHHHHHHHHHHHH
Confidence 3456799999999 9999999999984 4444321 22223345666663101234443333 1233444444444
Q ss_pred HHHHHhC
Q 012909 132 VNWVESA 138 (453)
Q Consensus 132 ~~~v~sg 138 (453)
...++.+
T Consensus 362 ~l~l~~~ 368 (421)
T PTZ00050 362 ILSLYEQ 368 (421)
T ss_pred HHHHHcC
Confidence 4556555
No 214
>TIGR03150 fabF beta-ketoacyl-acyl-carrier-protein synthase II. FabB sequences should fall well below the noise cutoff of this model.
Probab=59.92 E-value=27 Score=35.91 Aligned_cols=76 Identities=12% Similarity=0.193 Sum_probs=44.4
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEE-EcccCCCCCccHHHHHHHHhcccCCCCeeEEeeC----C-cChhHHHHHHHHHHH
Q 012909 61 SLTVVTSLLEKYKIDPTQIGRLEV-GSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDST----N-ACYGGTAALFNCVNW 134 (453)
Q Consensus 61 a~~Aa~~aL~~agi~~~~Id~li~-~t~s~~~~~~~~a~~l~~~Lgl~G~~~~~~~dv~----~-aC~gg~~AL~~A~~~ 134 (453)
...|++++|+++|++|+|||.+.. +|.|+. ..+.-...+.+.+|.. ..+++.-.++ + ..++|+..+..+...
T Consensus 277 ~~~ai~~Al~~Agi~~~dId~ve~h~tgt~~-~D~~E~~a~~~~~~~~-~~~~~v~s~k~~~Gh~~~AsG~~~~~~~~~~ 354 (407)
T TIGR03150 277 AARAMRAALKDAGINPEDVDYINAHGTSTPL-GDKAETKAIKRVFGDH-AYKLAVSSTKSMTGHLLGAAGAIEAIFTVLA 354 (407)
T ss_pred HHHHHHHHHHHcCCCHhHCCEEeCcCCCCCC-CCHHHHHHHHHHhccC-CCCCceeCCcchhchhHHHHHHHHHHHHHHH
Confidence 568899999999999999999984 444432 2334445566776631 1133332222 2 233444444555555
Q ss_pred HHhC
Q 012909 135 VESA 138 (453)
Q Consensus 135 v~sg 138 (453)
++.+
T Consensus 355 l~~~ 358 (407)
T TIGR03150 355 IRDG 358 (407)
T ss_pred HhcC
Confidence 6554
No 215
>COG0304 FabB 3-oxoacyl-(acyl-carrier-protein) synthase [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=58.06 E-value=21 Score=37.37 Aligned_cols=111 Identities=13% Similarity=0.160 Sum_probs=61.0
Q ss_pred eechhHHhhhhCCCcCeeeEcccce----EEeccCCCCCHHHHHHHHHHHHHHHcCCCcCCcCEEE-EEcccCCCCCccH
Q 012909 22 CVLQEALEVHDGVSKGKYTVGLGQD----CMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLE-VGSETVIDKSKSI 96 (453)
Q Consensus 22 ~v~~~~l~~~~g~~~~k~~~Gig~r----~~av~~~~ed~~~la~~Aa~~aL~~agi~~~~Id~li-~~t~s~~~~~~~~ 96 (453)
.+...|.++.+|...--...|.|.. ++..|.++- +=+..|.+.+|+++|++|++||.|- .+|.|+. ..+.=
T Consensus 238 VLE~~ehA~aRGA~Iyaei~G~g~~~Da~h~t~P~p~g---~Ga~~am~~AL~~Agl~~~~idYinaHgTsT~~-nD~~E 313 (412)
T COG0304 238 VLEELEHALARGAKIYAEIVGYGTTSDAYHITAPAPDG---EGAIRAMRAALADAGLTPEDIDYINAHGTSTPA-NDKAE 313 (412)
T ss_pred EecChhhHHhCCCceEEEEEEEEecccccccCCCCCCC---chHHHHHHHHHHHcCCCHhHCCEEeCCCccCCC-ccHHH
Confidence 3455566666665431112344443 233333211 2344888999999999999999998 4565554 34555
Q ss_pred HHHHHHHhcccCCCCeeEEee---CCcChhHHHHHHHHHHHHHh
Q 012909 97 KTFLMQIFEKYGNTDIEGVDS---TNACYGGTAALFNCVNWVES 137 (453)
Q Consensus 97 a~~l~~~Lgl~G~~~~~~~dv---~~aC~gg~~AL~~A~~~v~s 137 (453)
+..|...||-+ ..+...... ..-|-|+.-++..+..++.-
T Consensus 314 ~~ai~~vfg~~-~~~~~vsstKs~tGH~lGAaGaveai~~~l~l 356 (412)
T COG0304 314 SLAIKRVFGEH-AKSLPVSSTKSLTGHTLGAAGAVEAIISLLAL 356 (412)
T ss_pred HHHHHHHhccc-ccCceeeecccccccChhhHHHHHHHHHHHHH
Confidence 56667777742 122222222 23455555555555555443
No 216
>PTZ00455 3-ketoacyl-CoA thiolase; Provisional
Probab=57.87 E-value=14 Score=39.00 Aligned_cols=79 Identities=11% Similarity=-0.004 Sum_probs=47.4
Q ss_pred eechhHHhhhhCCCc-----CeeeEcccceEEe--ccCCCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEEcccCCCCCc
Q 012909 22 CVLQEALEVHDGVSK-----GKYTVGLGQDCMA--FCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSK 94 (453)
Q Consensus 22 ~v~~~~l~~~~g~~~-----~k~~~Gig~r~~a--v~~~~ed~~~la~~Aa~~aL~~agi~~~~Id~li~~t~s~~~~~~ 94 (453)
.|..++.++..+.+| -++ .|.+..... ..+.+-.....+..|++++++++|++|+|||.+.+.-...
T Consensus 266 vl~See~A~~l~~~p~~~~~v~i-~g~~~~~~~~~~~~~~~~~~~~~~~A~~~a~~~AGl~~~DiD~~Ei~daFa----- 339 (438)
T PTZ00455 266 VLASEEGLQKMGLSPNDSRLVEI-KSLACASGNLYEDPPDATRMFTSRAAAQKALSMAGVKPSDLQVAEVHDCFT----- 339 (438)
T ss_pred EEecHHHHHhcCCCCCCCccEEE-EEEEEecCCcccCccccccchHHHHHHHHHHHHcCCCHHHCcEeeecccCh-----
Confidence 455667777777766 233 344433210 0011112233357899999999999999999998754322
Q ss_pred cHHHHHHHHhcc
Q 012909 95 SIKTFLMQIFEK 106 (453)
Q Consensus 95 ~~a~~l~~~Lgl 106 (453)
.......+.||+
T Consensus 340 ~~~l~~~e~lGl 351 (438)
T PTZ00455 340 IAELLMYEALGI 351 (438)
T ss_pred HHHHHHHHHcCC
Confidence 334445577776
No 217
>PRK09604 UGMP family protein; Validated
Probab=57.57 E-value=40 Score=34.08 Aligned_cols=29 Identities=10% Similarity=0.221 Sum_probs=25.2
Q ss_pred HHHHHHHHHHHHHHcCCCcCCcCEEEEEc
Q 012909 58 ISMSLTVVTSLLEKYKIDPTQIGRLEVGS 86 (453)
Q Consensus 58 ~~la~~Aa~~aL~~agi~~~~Id~li~~t 86 (453)
.+......+++|+++|+++.+||.|.++.
T Consensus 52 ~~~l~~~i~~~L~~~~~~~~did~iavt~ 80 (332)
T PRK09604 52 VENIVPLIEEALKEAGLTLEDIDAIAVTA 80 (332)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEec
Confidence 46667789999999999999999999865
No 218
>PRK06158 thiolase; Provisional
Probab=57.44 E-value=16 Score=37.80 Aligned_cols=43 Identities=9% Similarity=0.088 Sum_probs=31.2
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCEEEEEcccCCCCCccHHHHHHHHhcc
Q 012909 59 SMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEK 106 (453)
Q Consensus 59 ~la~~Aa~~aL~~agi~~~~Id~li~~t~s~~~~~~~~a~~l~~~Lgl 106 (453)
.-...|++++++++|++|+|||.+.+..+.+. ......+.||+
T Consensus 254 ~~~~~aa~~A~~~AGi~p~DId~~ElyD~Fs~-----~~l~~~E~lG~ 296 (384)
T PRK06158 254 TAAAESGPRAFAMAGLTPADIDVVELYDAFTI-----NTILFLEDLGF 296 (384)
T ss_pred hHHHHHHHHHHHHcCCCHHHCcEEEecCCchH-----HHHHHHHHcCC
Confidence 34568999999999999999999988654332 22333466666
No 219
>smart00825 PKS_KS Beta-ketoacyl synthase. The structure of beta-ketoacyl synthase is similar to that of the thiolase family and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains.
Probab=56.92 E-value=46 Score=34.43 Aligned_cols=48 Identities=17% Similarity=0.287 Sum_probs=32.7
Q ss_pred HHHHHHHHHHHHHHcCCCcCCcCEEEE-EcccCCCCCccHHHHHHHHhcc
Q 012909 58 ISMSLTVVTSLLEKYKIDPTQIGRLEV-GSETVIDKSKSIKTFLMQIFEK 106 (453)
Q Consensus 58 ~~la~~Aa~~aL~~agi~~~~Id~li~-~t~s~~~~~~~~a~~l~~~Lgl 106 (453)
......|++++|+++|++|+|||.+.. +|.++. ....-..-+...+|.
T Consensus 278 ~~~~~~a~~~al~~Agl~~~dId~i~~h~tgt~~-~d~~E~~al~~~~~~ 326 (424)
T smart00825 278 GPAQARLIRQALARAGVDPADVDYVEAHGTGTPL-GDPIEAEALAAVFGQ 326 (424)
T ss_pred HHHHHHHHHHHHHHhCCCHHHccEEEeeCCCCCC-CCHHHHHHHHHHHhc
Confidence 345567899999999999999999885 444442 122333455666663
No 220
>PRK06333 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=56.43 E-value=32 Score=35.79 Aligned_cols=46 Identities=13% Similarity=0.186 Sum_probs=32.2
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCEEEE-EcccCCCCCccHHHHHHHHhc
Q 012909 59 SMSLTVVTSLLEKYKIDPTQIGRLEV-GSETVIDKSKSIKTFLMQIFE 105 (453)
Q Consensus 59 ~la~~Aa~~aL~~agi~~~~Id~li~-~t~s~~~~~~~~a~~l~~~Lg 105 (453)
.-...|.+++|+++|++|+|||.|.. +|.|+. ..+.-...+.+.+|
T Consensus 288 ~~~~~a~~~Al~~Agi~p~dId~i~~hgtgt~~-~D~~E~~al~~~fg 334 (424)
T PRK06333 288 EGARRAMLIALRQAGIPPEEVQHLNAHATSTPV-GDLGEVAAIKKVFG 334 (424)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEeccCCCCcc-chHHHHHHHHHHhC
Confidence 34578899999999999999999984 444442 12233445667766
No 221
>cd00826 nondecarbox_cond_enzymes nondecarboxylating condensing enzymes; In general, thiolases catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.
Probab=56.03 E-value=36 Score=35.25 Aligned_cols=41 Identities=10% Similarity=0.042 Sum_probs=30.5
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEEEcccCCCCCccHHHHHHHHhcc
Q 012909 61 SLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEK 106 (453)
Q Consensus 61 a~~Aa~~aL~~agi~~~~Id~li~~t~s~~~~~~~~a~~l~~~Lgl 106 (453)
...|++++++++|++|+|||.+.+.-.. ........+.||+
T Consensus 271 ~~~A~~~al~~Agi~~~DID~~Ei~d~F-----a~~~l~~~e~lgl 311 (393)
T cd00826 271 PIEAARKALEKAGLGIGDLDLIEAHDAF-----AANACATNEALGL 311 (393)
T ss_pred HHHHHHHHHHHcCCCHHHcCeeehhhhh-----HHHHHHHHHHhCC
Confidence 4789999999999999999999875422 2233445566776
No 222
>PRK08313 acetyl-CoA acetyltransferase; Provisional
Probab=55.55 E-value=22 Score=36.70 Aligned_cols=80 Identities=10% Similarity=0.027 Sum_probs=46.9
Q ss_pred eechhHHhhhhCCCcCeeeEcccceE--EeccCCCCCHHHHHHHHHHHHHHHcCCC--cCCcCEEEEEcccCCCCCccHH
Q 012909 22 CVLQEALEVHDGVSKGKYTVGLGQDC--MAFCSEVEDVISMSLTVVTSLLEKYKID--PTQIGRLEVGSETVIDKSKSIK 97 (453)
Q Consensus 22 ~v~~~~l~~~~g~~~~k~~~Gig~r~--~av~~~~ed~~~la~~Aa~~aL~~agi~--~~~Id~li~~t~s~~~~~~~~a 97 (453)
.|..++.++..+.++-.+..|.+... ..+...+.........|++++++++|++ ++|||.+.+-.+.+. ..
T Consensus 216 vl~s~e~a~~l~~~~~~~I~g~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~Agi~~p~~Did~~el~d~F~~-----~~ 290 (386)
T PRK08313 216 VIGDEEAADAAAGRPVAWIHGTAMRTEPLAFAGRDQVNPQAGRDAAAALWKAAGITDPRDEIDVAEIYVPFSW-----FE 290 (386)
T ss_pred EEecHHHHHhcCCCCCeEEEEEEEEecCcccccccccccHHHHHHHHHHHHHcCCCCChhhCCEEEeccCChH-----HH
Confidence 45666777666666653334555432 1111111122344568999999999997 699999987554332 23
Q ss_pred HHHHHHhcc
Q 012909 98 TFLMQIFEK 106 (453)
Q Consensus 98 ~~l~~~Lgl 106 (453)
....+.||+
T Consensus 291 ~~~~e~lGl 299 (386)
T PRK08313 291 PMWLENLGF 299 (386)
T ss_pred HHHHHHcCC
Confidence 344566776
No 223
>cd00831 CHS_like Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes, also called type III PKSs. PKS generate an array of different products, dependent on the nature of the starter molecule. They share a common chemical strategy, after the starter molecule is loaded onto the active site cysteine, a carboxylative condensation reation extends the polyketide chain. Plant-specific PKS are dimeric iterative PKSs, using coenzyme A esters to deliver substrate to the active site, but they differ in the choice of starter molecule and the number of condensation reactions.
Probab=55.53 E-value=29 Score=35.30 Aligned_cols=82 Identities=12% Similarity=0.069 Sum_probs=50.6
Q ss_pred HHHHHHHHHHHHHc--CCCcCCcCEEEEEcccCCCCCccHHHHHHHHhcccCCC-Cee----EE-eeC-CcChhHHHHHH
Q 012909 59 SMSLTVVTSLLEKY--KIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNT-DIE----GV-DST-NACYGGTAALF 129 (453)
Q Consensus 59 ~la~~Aa~~aL~~a--gi~~~~Id~li~~t~s~~~~~~~~a~~l~~~Lgl~G~~-~~~----~~-dv~-~aC~gg~~AL~ 129 (453)
....++++++|+++ |++++|||.+++..- .+.+-..+.+.||+ ++ .+. .+ +.+ .++++-..+|.
T Consensus 259 ~~~~~~i~~~L~~~~~g~~~~did~~~~H~~-----~~~i~~~v~~~lgl--~~~~~~~s~~~l~~~GN~~sasi~~~L~ 331 (361)
T cd00831 259 KNLERVLRKLLARLGIGLFKLAFDHWCVHPG-----GRAVLDAVEKALGL--SPEDLEASRMVLRRYGNMSSSSVLYVLA 331 (361)
T ss_pred HHHHHHHHHHhccccCCCccccceEEEECCC-----ChHHHHHHHHHcCC--CHHHHHHHHHHHHHhCCchhccHHHHHH
Confidence 34556788999999 999999999998653 23344567888998 32 221 12 222 23334444444
Q ss_pred HHHHHHHhCC-CCCCeEEEEEe
Q 012909 130 NCVNWVESAS-WDGRYGLVVCT 150 (453)
Q Consensus 130 ~A~~~v~sg~-~~~~~aLVv~~ 150 (453)
.+ ++.|. .+|+++|+++.
T Consensus 332 ~~---~~~g~~~~Gd~vll~~~ 350 (361)
T cd00831 332 YM---EAKGRVKRGDRGLLIAF 350 (361)
T ss_pred HH---HHhCCCCCCCEEEEEEE
Confidence 44 44443 26788888865
No 224
>PRK07516 acetyl-CoA acetyltransferase; Provisional
Probab=55.37 E-value=52 Score=33.92 Aligned_cols=43 Identities=5% Similarity=-0.083 Sum_probs=31.1
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCEEEEEcccCCCCCccHHHHHHHHhcc
Q 012909 59 SMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEK 106 (453)
Q Consensus 59 ~la~~Aa~~aL~~agi~~~~Id~li~~t~s~~~~~~~~a~~l~~~Lgl 106 (453)
.-...|++++++++|++|+|||.+.+.-... .......+.||+
T Consensus 260 ~~~~~a~~~a~~~agl~~~did~~e~~d~f~-----~~~~~~~e~lg~ 302 (389)
T PRK07516 260 EGPRRAWQRALAQAGVTLDDLSFVETHDCFT-----IAELIEYEAMGL 302 (389)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEecCCC-----HHHHHHHHHcCC
Confidence 3345799999999999999999998754322 233445566776
No 225
>PRK08256 lipid-transfer protein; Provisional
Probab=54.74 E-value=56 Score=33.74 Aligned_cols=41 Identities=12% Similarity=0.152 Sum_probs=30.3
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEEEcccCCCCCccHHHHHHHHhcc
Q 012909 61 SLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEK 106 (453)
Q Consensus 61 a~~Aa~~aL~~agi~~~~Id~li~~t~s~~~~~~~~a~~l~~~Lgl 106 (453)
...|++++++++|++++|||.+.+.-.. ........+.||+
T Consensus 266 ~~~a~~~a~~~ag~~~~DiD~~ei~d~f-----~~~~l~~le~lg~ 306 (391)
T PRK08256 266 TRAAAQQVYEQAGIGPEDIDVVELHDCF-----SANELLTYEALGL 306 (391)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEeeccCC-----cHHHHHHHHHcCC
Confidence 4579999999999999999999875432 2333445577776
No 226
>cd00829 SCP-x_thiolase Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; SCP-2 has multiple roles in intracellular lipid circulation and metabolism. The N-terminal presequence in the SCP-x isoform represents a peroxisomal 3-ketacyl-Coa thiolase specific for branched-chain acyl CoAs, which is proteolytically cleaved from the sterol carrier protein.
Probab=53.58 E-value=62 Score=32.90 Aligned_cols=43 Identities=9% Similarity=-0.003 Sum_probs=31.5
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCEEEEEcccCCCCCccHHHHHHHHhcc
Q 012909 59 SMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEK 106 (453)
Q Consensus 59 ~la~~Aa~~aL~~agi~~~~Id~li~~t~s~~~~~~~~a~~l~~~Lgl 106 (453)
.-...|++++|+++|++++|||.+.+..+.+ .......+.||+
T Consensus 251 ~~~~~a~~~al~~Agl~~~did~~ei~d~F~-----~~~l~~~e~lGl 293 (375)
T cd00829 251 DAARLAARRAYKMAGITPDDIDVAELYDCFT-----IAELLALEDLGF 293 (375)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEecCcCh-----HHHHHHHHHcCC
Confidence 4446899999999999999999998765433 233444566676
No 227
>COG3425 PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipid metabolism]
Probab=53.56 E-value=29 Score=35.66 Aligned_cols=87 Identities=8% Similarity=-0.046 Sum_probs=56.3
Q ss_pred CHHHHHHHHHHHHHHHcCCCcCCcCEEEEEcccCCCCCccHHHHHHHHhcccC---CCCeeEE-eeCC-cChhHHHHHHH
Q 012909 56 DVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYG---NTDIEGV-DSTN-ACYGGTAALFN 130 (453)
Q Consensus 56 d~~~la~~Aa~~aL~~agi~~~~Id~li~~t~s~~~~~~~~a~~l~~~Lgl~G---~~~~~~~-dv~~-aC~gg~~AL~~ 130 (453)
.-.....+|++.++++.|..|+|.|.+++.+-.+- ....++..|+... .+..... .++| .|.+...+|..
T Consensus 206 ~Y~~~~~~a~~~~~~k~gls~~dfdy~vfH~P~~k-----~~~ka~k~l~~~~e~v~~~l~~~~~vGN~YtgS~~L~Las 280 (377)
T COG3425 206 AYFKHVENAAKGYMEKTGLSPDDFDYIVFHQPNGK-----FPKKAAKSLGFKEEQVKPGLVYPQRIGNTYTGSLLLGLAS 280 (377)
T ss_pred HHHHHHHHHHHHHHHHhCCChhhhCeEEecCCCCc-----hHHHHHHHhCccHhhcCccchhhhhcCcccchhHHHHHHH
Confidence 34677789999999999999999999999774332 2333444554410 1233333 3543 56666666666
Q ss_pred HHHHHHhCCCCCCeEEEEEe
Q 012909 131 CVNWVESASWDGRYGLVVCT 150 (453)
Q Consensus 131 A~~~v~sg~~~~~~aLVv~~ 150 (453)
..+... .+|+++|++.-
T Consensus 281 ~L~~a~---~~G~rIl~~SY 297 (377)
T COG3425 281 LLDNAK---LPGDRILLFSY 297 (377)
T ss_pred HHhhcC---CCCCEEEEEee
Confidence 655554 26789998854
No 228
>PRK07855 lipid-transfer protein; Provisional
Probab=53.50 E-value=19 Score=37.27 Aligned_cols=79 Identities=10% Similarity=0.003 Sum_probs=44.8
Q ss_pred eechhHHhhhhCCCcCeeeEcccceEEe----cc-CCCCCH--HHHHHHHHHHHHHHcCCCcCCcCEEEEEcccCCCCCc
Q 012909 22 CVLQEALEVHDGVSKGKYTVGLGQDCMA----FC-SEVEDV--ISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSK 94 (453)
Q Consensus 22 ~v~~~~l~~~~g~~~~k~~~Gig~r~~a----v~-~~~ed~--~~la~~Aa~~aL~~agi~~~~Id~li~~t~s~~~~~~ 94 (453)
.|..++.++..+..|-++ .|++...-. +. ....+. ......|++++++++|++|+|||.+.+..+..
T Consensus 223 vl~see~A~~l~~~pv~I-~g~~~~~~~~~~~~~~~~~~d~~~~~~~~~aa~~a~~~AGi~~~DiDv~El~D~Ft----- 296 (386)
T PRK07855 223 VVTSAERARDLKQRPAVI-KAAAQGSGADQYMMTSYYRDDITGLPEMGLVARQLWAQSGLGPADIDTAILYDHFT----- 296 (386)
T ss_pred EEecHHHHhhCCCCCEEE-EEEEEecCCccccccccccccccccchHHHHHHHHHHHcCCCHHHCcEEEeccCCc-----
Confidence 455666666655445433 455542210 00 001122 22234799999999999999999998754332
Q ss_pred cHHHHHHHHhcc
Q 012909 95 SIKTFLMQIFEK 106 (453)
Q Consensus 95 ~~a~~l~~~Lgl 106 (453)
.......+.||+
T Consensus 297 ~~~l~~~E~lG~ 308 (386)
T PRK07855 297 PFVLMQLEELGF 308 (386)
T ss_pred HHHHHHHHHcCC
Confidence 233444566776
No 229
>PRK06365 acetyl-CoA acetyltransferase; Provisional
Probab=52.80 E-value=62 Score=34.03 Aligned_cols=41 Identities=10% Similarity=-0.006 Sum_probs=30.0
Q ss_pred HHHHHHHHHHHcCCC--cCCcCEEEEEcccCCCCCccHHHHHHHHhcc
Q 012909 61 SLTVVTSLLEKYKID--PTQIGRLEVGSETVIDKSKSIKTFLMQIFEK 106 (453)
Q Consensus 61 a~~Aa~~aL~~agi~--~~~Id~li~~t~s~~~~~~~~a~~l~~~Lgl 106 (453)
...|++++++++|++ ++|||.+.+.-+.. .......+.||+
T Consensus 295 ~~~a~~~a~~~AGl~~~~~DiD~~Ei~D~Fa-----~~~l~~lE~lGl 337 (430)
T PRK06365 295 GRMAAKEAYEMAGITDPLNDLDLIELHDAYT-----SSEIQTYEDLGL 337 (430)
T ss_pred HHHHHHHHHHHcCCCCCHHHCCEEEeecCCc-----HHHHHHHHHcCC
Confidence 457999999999997 79999998865333 223344567776
No 230
>PRK06501 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=51.23 E-value=47 Score=34.77 Aligned_cols=44 Identities=20% Similarity=0.273 Sum_probs=29.9
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEE-EcccCCCCCccHHHHHHHHhc
Q 012909 61 SLTVVTSLLEKYKIDPTQIGRLEV-GSETVIDKSKSIKTFLMQIFE 105 (453)
Q Consensus 61 a~~Aa~~aL~~agi~~~~Id~li~-~t~s~~~~~~~~a~~l~~~Lg 105 (453)
...|.+++|+++|++|+|||.+.. +|.++. ..+.-..-|.+.+|
T Consensus 291 ~~~ai~~AL~~agi~p~dId~i~~Hgtgt~~-~d~~E~~al~~~~~ 335 (425)
T PRK06501 291 AIGAIRAALADAGLTPEQIDYINAHGTSTPE-NDKMEYLGLSAVFG 335 (425)
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEecCccCcc-hHHHHHHHHHHHhc
Confidence 568899999999999999999985 443432 22333334455555
No 231
>PLN02836 3-oxoacyl-[acyl-carrier-protein] synthase
Probab=50.71 E-value=1.1e+02 Score=32.19 Aligned_cols=47 Identities=13% Similarity=0.244 Sum_probs=31.6
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCEEEE-EcccCCCCCccHHHHHHHHhcc
Q 012909 59 SMSLTVVTSLLEKYKIDPTQIGRLEV-GSETVIDKSKSIKTFLMQIFEK 106 (453)
Q Consensus 59 ~la~~Aa~~aL~~agi~~~~Id~li~-~t~s~~~~~~~~a~~l~~~Lgl 106 (453)
.-...|++++|+++|++|+|||.|.. +|.|+. ..+.-..-+...+|-
T Consensus 299 ~~~~~a~~~Al~~Agi~~~dId~ve~hgtgt~~-~D~~E~~ai~~~~~~ 346 (437)
T PLN02836 299 RGAVLAMTRALQQSGLHPNQVDYVNAHATSTPL-GDAVEARAIKTVFSE 346 (437)
T ss_pred HHHHHHHHHHHHHcCCCHhHcCEEEccCCcCcC-cCHHHHHHHHHHhcc
Confidence 33567899999999999999999985 444442 222333445566653
No 232
>PRK06519 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=50.29 E-value=50 Score=34.32 Aligned_cols=45 Identities=9% Similarity=-0.110 Sum_probs=30.5
Q ss_pred HHHHHHHHHHHHcCCCcCCcCEEEE-EcccCCCCCccHHHHHHHHhcc
Q 012909 60 MSLTVVTSLLEKYKIDPTQIGRLEV-GSETVIDKSKSIKTFLMQIFEK 106 (453)
Q Consensus 60 la~~Aa~~aL~~agi~~~~Id~li~-~t~s~~~~~~~~a~~l~~~Lgl 106 (453)
-..++.+++|+++|+ |+|||.|.. +|.|+. ....=..-|.+.++.
T Consensus 281 ~~~~am~~AL~~Agl-~~~IdyI~ahgtgT~~-~D~~E~~Ai~~~f~~ 326 (398)
T PRK06519 281 DLEASLERLLKPAGG-LAAPTAVISGATGAHP-ATAEEKAALEAALAG 326 (398)
T ss_pred HHHHHHHHHHHHCCC-cccCCEEEeCCCCCCC-ccHHHHHHHHHHcCC
Confidence 346899999999999 899999884 454543 122334455666663
No 233
>PRK12880 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=47.32 E-value=57 Score=33.26 Aligned_cols=43 Identities=12% Similarity=0.075 Sum_probs=33.6
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCEEEEEcccCCCCCccHHHHHHHHhcc
Q 012909 59 SMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEK 106 (453)
Q Consensus 59 ~la~~Aa~~aL~~agi~~~~Id~li~~t~s~~~~~~~~a~~l~~~Lgl 106 (453)
.....+++++|+++|++++|||.+++.. ..+.+-..+.+.||+
T Consensus 242 ~~~~~~i~~~L~~~gl~~~did~~v~HQ-----~~~~i~~~i~~~Lgl 284 (353)
T PRK12880 242 ECEPKSFKEILEFSKVDEKDIAFHLFHQ-----SNAYLVDCIKEELKL 284 (353)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEECC-----CCHHHHHHHHHHhCC
Confidence 3445678899999999999999999854 234455678899998
No 234
>PRK07103 polyketide beta-ketoacyl:acyl carrier protein synthase; Validated
Probab=46.42 E-value=1.1e+02 Score=31.74 Aligned_cols=28 Identities=18% Similarity=0.407 Sum_probs=23.3
Q ss_pred HHHHHHHHHHcCCCcCCcCEEEE-EcccC
Q 012909 62 LTVVTSLLEKYKIDPTQIGRLEV-GSETV 89 (453)
Q Consensus 62 ~~Aa~~aL~~agi~~~~Id~li~-~t~s~ 89 (453)
.++.+++|+++|++|+|||.|.. +|.|+
T Consensus 284 ~~a~~~Al~~Agi~~~dId~v~~hgtgt~ 312 (410)
T PRK07103 284 MRVIRAALRRAGLGPEDIDYVNPHGTGSP 312 (410)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEccCCCCC
Confidence 58999999999999999999874 44444
No 235
>cd00827 init_cond_enzymes "initiating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type III and polyketide synthases, type III, which include chalcone synthase and related enzymes. They are characterized by the utlization of CoA substrate primers, as well as the nature of their active site residues.
Probab=43.27 E-value=87 Score=30.88 Aligned_cols=87 Identities=13% Similarity=0.048 Sum_probs=51.3
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCEEEEEcccCCCCCccHHHHHHHHhcccCCCCeeE-----EeeCC--cChhHHHHHH
Q 012909 57 VISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEG-----VDSTN--ACYGGTAALF 129 (453)
Q Consensus 57 ~~~la~~Aa~~aL~~agi~~~~Id~li~~t~s~~~~~~~~a~~l~~~Lgl~G~~~~~~-----~dv~~--aC~gg~~AL~ 129 (453)
......++++++|++.+++ ++||.++....+. +..-..+.+.|++. ..++.. ++-.. +|++-..+|.
T Consensus 221 ~~~~~~~~~~~~l~~~~~~-~~i~~~~~h~~~~----~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~Gn~~sa~~~~~L~ 294 (324)
T cd00827 221 AHKLIAKVVRKALDRAGLS-EDIDYFVPHQPNG----KKILEAVAKKLGGP-PEKASQTRWILLRRVGNMYAASILLGLA 294 (324)
T ss_pred HhHHHHHHHHHHHHHcccc-cccceeeccCchH----HHHHHHHHHHccch-HhhhccchhhHHHHhCchHHHHHHHHHH
Confidence 3566678889999999999 9999888654322 14556777888861 112221 22222 3333334444
Q ss_pred HHHHHHHhCC-CCCCeEEEEEeec
Q 012909 130 NCVNWVESAS-WDGRYGLVVCTDT 152 (453)
Q Consensus 130 ~A~~~v~sg~-~~~~~aLVv~~d~ 152 (453)
.+ ++.+. .+|+++|+++.-.
T Consensus 295 ~~---~~~~~~~~Gd~vl~~~~G~ 315 (324)
T cd00827 295 SL---LESGKLKAGDRVLLFSYGS 315 (324)
T ss_pred HH---HhcCCCCCCCEEEEEEecc
Confidence 33 33442 2578898887543
No 236
>TIGR01835 HMG-CoA-S_prok 3-hydroxy-3-methylglutaryl CoA synthase, prokaryotic clade. This clade of hydroxymethylglutaryl-CoA (HMG-CoA) synthases is found in a limited spectrum of mostly gram-positive bacteria which make isopentenyl pyrophosphate (IPP) via the mevalonate pathway. This pathway is found primarily in eukaryotes and archaea, but the bacterial homologs are distinct, having aparrently diverged after being laterally transferred from an early eukaryote. HMG-CoA synthase is the first step in the pathway and joins acetyl-CoA with acetoacetyl-CoA with the release of one molecule of CoA. The Borellia sequence may have resulted from a separate lateral transfer event.
Probab=41.22 E-value=59 Score=33.48 Aligned_cols=29 Identities=0% Similarity=-0.079 Sum_probs=24.4
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCEEEEEcc
Q 012909 59 SMSLTVVTSLLEKYKIDPTQIGRLEVGSE 87 (453)
Q Consensus 59 ~la~~Aa~~aL~~agi~~~~Id~li~~t~ 87 (453)
....++.+++|+++|++++|||.+++..-
T Consensus 205 ~~~~~~~~~~l~~~g~~~~did~~i~H~p 233 (379)
T TIGR01835 205 NAFENAWNDYAKRTGLSLADFAAFCFHVP 233 (379)
T ss_pred HHHHHHHHHHHHHhCCCHHHcCEEEECCC
Confidence 34567888999999999999999998663
No 237
>PF01135 PCMT: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); InterPro: IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (2.1.1.77 from EC) (PCMT) [] (which is also known as L-isoaspartyl protein carboxyl methyltransferase) is an enzyme that catalyses the transfer of a methyl group from S-adenosylmethionine to the free carboxyl groups of D-aspartyl or L-isoaspartyl residues in a variety of peptides and proteins. The enzyme does not act on normal L-aspartyl residues L-isoaspartyl and D-aspartyl are the products of the spontaneous deamidation and/or isomerisation of normal L-aspartyl and L-asparaginyl residues in proteins. PCMT plays a role in the repair and/or degradation of these damaged proteins; the enzymatic methyl esterification of the abnormal residues can lead to their conversion to normal L-aspartyl residues. The SAM domain is present in most of these proteins.; GO: 0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity, 0006464 protein modification process; PDB: 3LBF_A 1DL5_B 1JG3_B 1JG2_A 1JG1_A 1JG4_A 2YXE_A 2PBF_B 1VBF_C 1R18_A ....
Probab=39.71 E-value=25 Score=33.10 Aligned_cols=44 Identities=27% Similarity=0.348 Sum_probs=29.3
Q ss_pred ccCccccchHHHHHHHHHhhcCcCCCCCEEEEEEecchhhheeeE
Q 012909 313 QVGNMYTASLYAAFASLLHEKHSSLEGKRVIMFSYGSGLTATMFS 357 (453)
Q Consensus 313 ~~GN~~taSl~l~L~sll~~~~~~~~Gd~ill~syGsG~~~~~~~ 357 (453)
.+|.=.+-|.|...+.+++. -.+++|++|+=++-|||..+..+.
T Consensus 48 ~i~~~~~is~P~~~a~~l~~-L~l~pg~~VLeIGtGsGY~aAlla 91 (209)
T PF01135_consen 48 PIGCGQTISAPSMVARMLEA-LDLKPGDRVLEIGTGSGYQAALLA 91 (209)
T ss_dssp EEETTEEE--HHHHHHHHHH-TTC-TT-EEEEES-TTSHHHHHHH
T ss_pred eecceeechHHHHHHHHHHH-HhcCCCCEEEEecCCCcHHHHHHH
Confidence 44555666777777777776 357899999999999998776554
No 238
>PRK06065 acetyl-CoA acetyltransferase; Provisional
Probab=39.68 E-value=59 Score=33.75 Aligned_cols=79 Identities=9% Similarity=-0.093 Sum_probs=44.6
Q ss_pred eechhHHhhhhCCCcCeeeEcccce--EEeccCCCCCHHHHHHHHHHHHHHHcCCCc--CCcCEEEEEcccCCCCCccHH
Q 012909 22 CVLQEALEVHDGVSKGKYTVGLGQD--CMAFCSEVEDVISMSLTVVTSLLEKYKIDP--TQIGRLEVGSETVIDKSKSIK 97 (453)
Q Consensus 22 ~v~~~~l~~~~g~~~~k~~~Gig~r--~~av~~~~ed~~~la~~Aa~~aL~~agi~~--~~Id~li~~t~s~~~~~~~~a 97 (453)
.|..+|.++..+.+|-++ .|.+.. .......+.........|++++++++|+++ +|||.+.+--+.. ...
T Consensus 224 vl~s~e~A~~l~~~~v~I-~g~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~aGi~~p~~diD~~ei~D~Fs-----~~~ 297 (392)
T PRK06065 224 VLASEDLARRYTDTPVWV-EGVGWTLDNTEWPNRDLAYPRYVEFAARMAYKMAGIERPRKEIDVAEPYDPFD-----YKE 297 (392)
T ss_pred EEeCHHHHHhcCCCCEEE-EEEEEecCccccccccccccHHHHHHHHHHHHHcCCCCchhhCcEEEecCCCh-----HHH
Confidence 456677777776666554 344432 111111111112223579999999999985 9999998754322 223
Q ss_pred HHHHHHhcc
Q 012909 98 TFLMQIFEK 106 (453)
Q Consensus 98 ~~l~~~Lgl 106 (453)
....+.||+
T Consensus 298 l~~~E~lG~ 306 (392)
T PRK06065 298 LHHLEGLQL 306 (392)
T ss_pred HHHHHHcCC
Confidence 334456665
No 239
>COG1214 Inactive homolog of metal-dependent proteases, putative molecular chaperone [Posttranslational modification, protein turnover, chaperones]
Probab=39.53 E-value=55 Score=31.07 Aligned_cols=63 Identities=10% Similarity=0.059 Sum_probs=40.6
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEEcccCCCCCccHHHHHHHHhcccCCCCeeEEeeC
Q 012909 54 VEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDST 118 (453)
Q Consensus 54 ~ed~~~la~~Aa~~aL~~agi~~~~Id~li~~t~s~~~~~~~~a~~l~~~Lgl~G~~~~~~~dv~ 118 (453)
...-.+......+.+|.++|+++.|||.|+|+.-=+....--++.-+++-|.+ .-+++.+-++
T Consensus 34 ~r~hse~l~~~i~~ll~~~~~~~~dld~iav~~GPGSFTGlRIG~~~AkgLA~--~l~iplvgvs 96 (220)
T COG1214 34 KRNHAERLMPMIDELLKEAGLSLQDLDAIAVAKGPGSFTGLRIGVAFAKGLAL--ALNIPLVGVS 96 (220)
T ss_pred cccHHHHHHHHHHHHHHHcCCCHHHCCEEEEccCCCcccchhhHHHHHHHHHH--HcCCCEEEeC
Confidence 34456788889999999999999999999996432222121233444444554 3456666553
No 240
>TIGR03723 bact_gcp putative glycoprotease GCP. This model represents bacterial members of a protein family that is widely distributed. In a few pathogenic species, the protein is exported in a way that may represent an exceptional secondary function. This model plus companion (archaeal) model TIGR03722 together span the prokaryotic member sequences of TIGR00329, a protein family that appears universal in life, and whose broad function is unknown. A member of TIGR03722 has been characterized as a DNA-binding protein with apurinic endopeptidase activity. In contrast, the rare characterized members of the present family show O-sialoglycoprotein endopeptidase (EC. 3.4.24.57) activity after export. These include glycoprotease (gcp) from Pasteurella haemolytica A1 and a cohemolysin from Riemerella anatipestifer (GB|AAG39646.1). The member from Staphylococcus aureus is essential and is related to cell wall dynamics and the modulation of autolysis, but members are also found in the Mycoplasmas
Probab=39.07 E-value=1.1e+02 Score=30.58 Aligned_cols=59 Identities=5% Similarity=0.030 Sum_probs=36.7
Q ss_pred HHHHHHHHHHHHHHcCCCcCCcCEEEEEcccCCCCCccHHHHHHHHhcccCCCCeeEEeeC
Q 012909 58 ISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDST 118 (453)
Q Consensus 58 ~~la~~Aa~~aL~~agi~~~~Id~li~~t~s~~~~~~~~a~~l~~~Lgl~G~~~~~~~dv~ 118 (453)
.+......+++|+++++++++||.|.++..=+....--++.-+++-|.. .-+++.+.+.
T Consensus 50 ~~~l~~~i~~~l~~~~~~~~~id~iav~~GPGsftglrig~~~Ak~la~--~~~~p~~~v~ 108 (314)
T TIGR03723 50 LEAIPPLIEEALAEAGLTLSDIDAIAVTAGPGLIGALLVGVSFAKALAL--ALNKPLIGVN 108 (314)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEecCCChHHhHHHHHHHHHHHHH--HhCCCEEecc
Confidence 4566678899999999999999999986533322121233344444443 2345555554
No 241
>PRK07801 acetyl-CoA acetyltransferase; Provisional
Probab=37.32 E-value=37 Score=35.00 Aligned_cols=40 Identities=13% Similarity=0.105 Sum_probs=28.6
Q ss_pred HHHHHHHHHHcCCCcCCcCEEEEEcccCCCCCccHHHHHHHHhcc
Q 012909 62 LTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEK 106 (453)
Q Consensus 62 ~~Aa~~aL~~agi~~~~Id~li~~t~s~~~~~~~~a~~l~~~Lgl 106 (453)
..|++++++++|+.|+|||.+.+.-. + ........+.||+
T Consensus 283 ~~a~~~a~~~agi~~~did~~e~~d~----F-a~~~~~~~e~lG~ 322 (382)
T PRK07801 283 IPATRYALEKTGLSIDDIDVVEINEA----F-APVVLAWLKETGA 322 (382)
T ss_pred HHHHHHHHHHcCCCHHHcCEeeeccc----c-hHHHHHHHHHhCC
Confidence 57999999999999999999965322 1 1233344567776
No 242
>PF07736 CM_1: Chorismate mutase type I; InterPro: IPR008243 Chorismate mutase (CM; 5.4.99.5 from EC) catalyses the reaction at the branch point of the biosynthetic pathway leading to the three aromatic amino acids, phenylalanine, tryptophan and tyrosine (chorismic acid is the last common intermediate, and CM leads to the L-phenylalanine/L-tyrosine branch). It is part of the shikimate pathway, which is present only in bacteria, fungi and plants. This entry represents a family of monofunctional (non-fused) chorismate mutases from Gram-positive bacteria (Firmicutes) and cyanobacteria. Trusted members of the family are found in operons with other enzymes of the chorismate pathways, both up- and downstream of CM (Listeria, Bacillus, Oceanobacillus) or are the sole CM in the genome where the other members of the chorismate pathways are found elsewhere in the genome (Nostoc, Thermosynechococcus). They are monofunctional, homotrimeric, nonallosteric enzymes and are not regulated by the end-product aromatic amino acids. The three types of CM are AroQ class, Prokaryotic type (e.g., IPR008239 from INTERPRO amongst others); AroQ class, Eukaryotic type (IPR008238 from INTERPRO); and AroH class. They fall into two structural folds (AroQ class and AroH class) which are completely unrelated []. The two types of the AroQ structural class (the Escherichia coli CM dimer and the yeast CM monomer) can be structurally superimposed, and the topology of the four-helix bundle forming the active site is conserved []. For additional information please see [, , , , , , ].; PDB: 2CHS_K 2CHT_L 1COM_J 1FNJ_A 1FNK_A 1DBF_C 1UI9_A 1ODE_A 1UFY_A 1XHO_C ....
Probab=36.96 E-value=50 Score=28.23 Aligned_cols=48 Identities=13% Similarity=0.103 Sum_probs=26.9
Q ss_pred HHHHHHHHcCCCcCCcCEEEEEcccCCC--CCccHHHHHHHHh-cccCCCCeeEEeeC
Q 012909 64 VVTSLLEKYKIDPTQIGRLEVGSETVID--KSKSIKTFLMQIF-EKYGNTDIEGVDST 118 (453)
Q Consensus 64 Aa~~aL~~agi~~~~Id~li~~t~s~~~--~~~~~a~~l~~~L-gl~G~~~~~~~dv~ 118 (453)
-..+++++.+++++||-.++|. .|++- ..|+.+. +.+ |. .+++.+...
T Consensus 25 Ll~~i~~~N~l~~~dIvSi~FT-~T~DL~a~fPA~a~---R~~~g~---~~Vpl~c~~ 75 (118)
T PF07736_consen 25 LLEEILERNELSPEDIVSIIFT-VTPDLDAAFPAAAA---RELPGW---DDVPLMCAQ 75 (118)
T ss_dssp HHHHHHHHTT--GGGEEEEEEE-E-TT--SS-TCHHH---HHTTTG---TTSEEEEEE
T ss_pred HHHHHHHHcCCCHHHEEEEEEE-eCCCcCccChHHHH---HccCCC---CccceeccC
Confidence 3455567899999999999984 44432 2444433 444 54 666666553
No 243
>TIGR00329 gcp_kae1 metallohydrolase, glycoprotease/Kae1 family. This subfamily includes the well-studied secreted O-sialoglycoprotein endopeptidase (glycoprotease, EC 3.4.24.57) of Pasteurella haemolytica, a pathogen. A member from Riemerella anatipestifer, associated with cohemolysin activity, likewise is exported without benefit of a classical signal peptide and shows glycoprotease activity on the test substrate glycophorin. However, archaeal members of this subfamily show unrelated activities as demonstrated in Pyrococcus abyssi: DNA binding, iron binding, apurinic endonuclease activity, genomic association with a kinase domain, and no glycoprotease activity. This family thus pulls together a set of proteins as a homology group that appears to be near-universal in life, yet heterogeneous in assayed function between bacteria and archaea.
Probab=34.39 E-value=56 Score=32.55 Aligned_cols=59 Identities=8% Similarity=0.052 Sum_probs=36.4
Q ss_pred HHHHHHHHHHHHHHcCCCcCCcCEEEEEcccCCCCCccHHHHHHHHhcccCCCCeeEEeeC
Q 012909 58 ISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDST 118 (453)
Q Consensus 58 ~~la~~Aa~~aL~~agi~~~~Id~li~~t~s~~~~~~~~a~~l~~~Lgl~G~~~~~~~dv~ 118 (453)
.+......+++|+++|++++|||.|.++..=+....--++...++.|.. .-+++.+.+.
T Consensus 49 ~~~l~~~i~~~l~~~~~~~~did~iav~~GPG~~tglrvg~~~Ak~la~--~~~~p~~~v~ 107 (305)
T TIGR00329 49 AENIPPLLERALIESNVDKSEIDLIAYTQGPGLGGSLRVGATFARSLAL--SLDKPLIGVN 107 (305)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEecCCCchhhHHHHHHHHHHHHH--HhCCCEeecc
Confidence 4555667899999999999999999986533322222233334444443 2344555553
No 244
>PRK14878 UGMP family protein; Provisional
Probab=33.78 E-value=1.4e+02 Score=30.05 Aligned_cols=27 Identities=22% Similarity=0.274 Sum_probs=23.2
Q ss_pred HHHHHHHHHHHHcCCCcCCcCEEEEEc
Q 012909 60 MSLTVVTSLLEKYKIDPTQIGRLEVGS 86 (453)
Q Consensus 60 la~~Aa~~aL~~agi~~~~Id~li~~t 86 (453)
.-..+.+++|+++|++++|||.|.++.
T Consensus 47 ~l~~~i~~~l~~a~~~~~did~Iavt~ 73 (323)
T PRK14878 47 VAPELLRKALEKAGISIEDIDAVAVSQ 73 (323)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEec
Confidence 344889999999999999999998865
No 245
>KOG1394 consensus 3-oxoacyl-(acyl-carrier-protein) synthase (I and II) [Lipid transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism]
Probab=32.74 E-value=37 Score=34.71 Aligned_cols=81 Identities=15% Similarity=0.217 Sum_probs=46.3
Q ss_pred eechhHHhhhhCCCcCee--eEcccc--e--EEeccCCCCCHHHHHHHHHHHHHHHcCCCcCCcCEEE-EEcccCCCCCc
Q 012909 22 CVLQEALEVHDGVSKGKY--TVGLGQ--D--CMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLE-VGSETVIDKSK 94 (453)
Q Consensus 22 ~v~~~~l~~~~g~~~~k~--~~Gig~--r--~~av~~~~ed~~~la~~Aa~~aL~~agi~~~~Id~li-~~t~s~~~~~~ 94 (453)
.+-+|+|+.+......-| ..|.|. . ++.-|+++-.- ++.|.+++|+++|+.|+|||.|= .+|+|+.. ..
T Consensus 261 vlvlEelEHA~~RgA~I~AE~lGygls~Da~HiT~P~~dG~G---a~~am~raL~~Agl~pe~i~YvNAHATST~~G-D~ 336 (440)
T KOG1394|consen 261 VLVLEELEHAKKRGAPIYAEVLGYGLSSDAYHITSPDPDGAG---AVLAMERALKDAGLSPEDIDYVNAHATSTPLG-DA 336 (440)
T ss_pred EEehHhHHHHHHcCCceeHHhhcCcccccccccCCCCCCcch---HHHHHHHHHHHcCCChhhcCeeecccccCcCc-hH
Confidence 345677766543222222 123333 2 33333333333 44556788999999999999987 56777653 22
Q ss_pred cHHHHHHHHhcc
Q 012909 95 SIKTFLMQIFEK 106 (453)
Q Consensus 95 ~~a~~l~~~Lgl 106 (453)
.-+..|.+.|+-
T Consensus 337 aE~~Ai~~vf~~ 348 (440)
T KOG1394|consen 337 AEAEAIKRVFGE 348 (440)
T ss_pred HHHHHHHHHhcc
Confidence 344556677764
No 246
>KOG1406 consensus Peroxisomal 3-ketoacyl-CoA-thiolase P-44/SCP2 [Lipid transport and metabolism]
Probab=32.57 E-value=56 Score=31.98 Aligned_cols=44 Identities=11% Similarity=0.183 Sum_probs=34.0
Q ss_pred HHHHHHHHHHHHHHcCCCcCCcCEEEEEcccCCCCCccHHHHHHHHhcc
Q 012909 58 ISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEK 106 (453)
Q Consensus 58 ~~la~~Aa~~aL~~agi~~~~Id~li~~t~s~~~~~~~~a~~l~~~Lgl 106 (453)
.+|...|++++.++.|+.|+||+.|....+.... --.--+.|||
T Consensus 271 fdm~~~aa~~l~aksgltpndvqvielhdcfs~n-----elityealgl 314 (408)
T KOG1406|consen 271 FDMTRLAAKRLFAKSGLTPNDVQVIELHDCFSAN-----ELITYEALGL 314 (408)
T ss_pred chHHHHHHHHHHHHcCCCcccceEEEeecccchh-----hhhhHHHhcC
Confidence 5899999999999999999999999987654322 1223366777
No 247
>TIGR01796 CM_mono_aroH monofunctional chorismate mutase, gram positive type, clade 1. This model represents a family of monofunctional (non-fused) chorismate mutases from gram positive bacteria (Firmicutes) and cyanobacteria. Trusted members of the family are found in operons with other enzymes of the chorismate pathways, both up- and downstream of CM (Listeria, Bacillus, Oceanobacillus) or are the sole CM in the genome where the other members of the chorismate pathways are found elsewhere in the genome (Nostoc, Thermosynechococcus).
Probab=31.75 E-value=73 Score=27.21 Aligned_cols=58 Identities=10% Similarity=0.056 Sum_probs=34.4
Q ss_pred CCHHHHHHHHHH----HHHHHcCCCcCCcCEEEEEcccCCCC-CccHHHHHHHHh-cccCCCCeeEEeeC
Q 012909 55 EDVISMSLTVVT----SLLEKYKIDPTQIGRLEVGSETVIDK-SKSIKTFLMQIF-EKYGNTDIEGVDST 118 (453)
Q Consensus 55 ed~~~la~~Aa~----~aL~~agi~~~~Id~li~~t~s~~~~-~~~~a~~l~~~L-gl~G~~~~~~~dv~ 118 (453)
++..+--.+|.+ +++++.+++++||-.++|..+.-.+. .|+ ..++.+ |. .+++.++..
T Consensus 12 ~nt~e~I~~at~eLl~~ii~~N~l~~edivSv~FT~T~DL~a~FPA---~aaR~~~Gw---~~Vplmc~q 75 (117)
T TIGR01796 12 RNEAEEIGEAVAELLTELMERNELTPEDLISVIFTVTEDLHADFPA---AAARGLPGW---TDVPVMCAQ 75 (117)
T ss_pred CCCHHHHHHHHHHHHHHHHHHcCCCHHHEEEEEEEecCcccccChH---HHHHhccCC---CCcceeccC
Confidence 344444444444 55578999999999999844333332 333 333454 65 677766654
No 248
>TIGR03725 bact_YeaZ universal bacterial protein YeaZ. This family describes a protein family, YeaZ, that appears to be universal in bacteria, but whose function is unknown. This family is related to the gcp (glycoprotease) protein family, also universal in bacteria and unknown in function. In Gram-positive lineages, members of these two related families often belong to the same operon, along with the ribosomal-protein-alanine acetyltransferase gene. Members of this family may occur as fusions with gcp or the ribosomal protein N-acetyltransferase rimI, and is frequently encoded next to rimI.
Probab=30.95 E-value=68 Score=29.82 Aligned_cols=31 Identities=16% Similarity=0.322 Sum_probs=26.6
Q ss_pred CHHHHHHHHHHHHHHHcCCCcCCcCEEEEEc
Q 012909 56 DVISMSLTVVTSLLEKYKIDPTQIGRLEVGS 86 (453)
Q Consensus 56 d~~~la~~Aa~~aL~~agi~~~~Id~li~~t 86 (453)
.-.+......+++|++++++++|||.|.++.
T Consensus 32 ~h~~~l~~~i~~~l~~~~~~~~~i~~iav~~ 62 (202)
T TIGR03725 32 NHSEILLPMIEELLAEAGLSLQDLDAIAVGV 62 (202)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEEec
Confidence 3456777889999999999999999999865
No 249
>PF00814 Peptidase_M22: Glycoprotease family; InterPro: IPR000905 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of metallopeptidases belong to MEROPS peptidase family M22 (clan MK). The type example being O-sialoglycoprotein endopeptidase (3.4.24.57 from EC) from Pasteurella haemolytica (Mannheimia haemolytica). O-Sialoglycoprotein endopeptidase is secreted by the bacterium P. haemolytica, and digests only proteins that are heavily sialylated, in particular those with sialylated serine and threonine residues []. Substrate proteins include glycophorin A and leukocyte surface antigens CD34, CD43, CD44 and CD45 [, ]. Removal of glycosylation, by treatment with neuraminidase, completely negates susceptibility to O-sialoglycoprotein endopeptidase digestion [, ]. Sequence similarity searches have revealed other members of the M22 family, from yeast, Mycobacterium, Haemophilus influenzae and the cyanobacterium Synechocystis []. The zinc-binding and catalytic residues of this family have not been determined, although the motif HMEGH may be a zinc-binding region [].; GO: 0004222 metalloendopeptidase activity, 0006508 proteolysis; PDB: 2A6A_A 2GEL_G 2GEM_B 1OKJ_B 3ENO_A 3EN9_B 2VWB_B 3ENH_B 2IVO_D 2IVP_A ....
Probab=27.89 E-value=52 Score=32.19 Aligned_cols=29 Identities=17% Similarity=0.197 Sum_probs=23.9
Q ss_pred HHHHHHHHHHHHHHcCCCcCCcCEEEEEc
Q 012909 58 ISMSLTVVTSLLEKYKIDPTQIGRLEVGS 86 (453)
Q Consensus 58 ~~la~~Aa~~aL~~agi~~~~Id~li~~t 86 (453)
.+......+++|++++++++|||.|.++.
T Consensus 30 ~~~L~~~i~~~l~~~~~~~~did~iavt~ 58 (268)
T PF00814_consen 30 SENLPPLIEELLKEAGISLSDIDAIAVTR 58 (268)
T ss_dssp HHHHHHHHHHHHHHHTS-GGGESEEEEEE
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEec
Confidence 45566788999999999999999999865
No 250
>PLN03172 chalcone synthase family protein; Provisional
Probab=27.13 E-value=1.7e+02 Score=30.40 Aligned_cols=34 Identities=6% Similarity=-0.043 Sum_probs=20.8
Q ss_pred HHH-HHHHHHHHHHHHHHhhhhcCCCCccCccEEEecC
Q 012909 202 CYL-MALDSCYKYFCQKFEKLEGRQFSMLDVDYFVFHS 238 (453)
Q Consensus 202 ~y~-~al~~~~~~~~~~~~~~~~~~~~~~d~d~~v~H~ 238 (453)
.|. .+.+.+.+...+.+ +++|+.++|||++++.+
T Consensus 97 ~~~~~a~~La~~Aa~~aL---~~ag~~~~dId~ii~~t 131 (393)
T PLN03172 97 MVVVEVPKLGKEAAAKAI---KEWGQPKSKITHLVFCT 131 (393)
T ss_pred HHHHHHHHHHHHHHHHHH---HHcCCCHHHCCEEEEEc
Confidence 344 33344444444444 56678999999998654
No 251
>PRK08304 stage V sporulation protein AD; Validated
Probab=26.27 E-value=4.6e+02 Score=26.72 Aligned_cols=89 Identities=13% Similarity=0.107 Sum_probs=46.5
Q ss_pred HHHHHHHH---HHHHHcCCCcCCcCEEEEEcccCCCCCccHHHHHHHHhcc--cC---CCCeeEEee-CC-------cCh
Q 012909 59 SMSLTVVT---SLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEK--YG---NTDIEGVDS-TN-------ACY 122 (453)
Q Consensus 59 ~la~~Aa~---~aL~~agi~~~~Id~li~~t~s~~~~~~~~a~~l~~~Lgl--~G---~~~~~~~dv-~~-------aC~ 122 (453)
-||=.|+. +=|++.|.+|++=|+|+.|--..+ ...+...|...-|. .. .+.+..||. ++ ||.
T Consensus 205 aMapAa~dti~~h~~d~~~~~~~yDli~tGDlg~v--G~~i~~~ll~~~g~~~~~~~~DcG~~iy~~~~q~~~aGgSGc~ 282 (337)
T PRK08304 205 AMAPAAADTIQQHFKDTGRSPEDYDLIVTGDLGRV--GREILKELLKEEGYDIGDNYNDCGLMIYDSEQQDVFAGGSGCA 282 (337)
T ss_pred hhhHHHHHHHHHHHHHcCCChhhccEEEEcchHHH--HHHHHHHHHHHhCCChhhcccccCeEEeccCCCcccCCCcccc
Confidence 34444443 335688999999999997642221 11222223222232 00 134456662 12 332
Q ss_pred hH-HHHHHHHHHHHHhCCCCCCeEEEEEee
Q 012909 123 GG-TAALFNCVNWVESASWDGRYGLVVCTD 151 (453)
Q Consensus 123 gg-~~AL~~A~~~v~sg~~~~~~aLVv~~d 151 (453)
-. +.---.-...++.|.+ +++|+|++-
T Consensus 283 csa~v~~~~~~~~~~~g~~--~rvl~v~tG 310 (337)
T PRK08304 283 CSAVVTYGYLLKELQKGKL--KRVLVVATG 310 (337)
T ss_pred hhHHHHHHHHHHHHhcCCc--eEEEEEEch
Confidence 21 1222234566788988 999999654
No 252
>PF01890 CbiG_C: Cobalamin synthesis G C-terminus; InterPro: IPR002750 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. CbiG proteins are specific for anaerobic cobalamin biosynthesis. CbiG, which shows homology with CobE of the aerobic pathway, participates in the conversion of cobalt-precorrin 5 into cobalt-precorrin 6 []. CbiG is responsible for the opening of the delta-lactone ring and extrusion of the C2-unit []. The aerobic pathway uses molecular oxygen to trigger the events at C-20 leading to contraction and expulsion of the C2-unit as acetic acid from a metal-free intermediate, whereas the anaerobic route involves the internal delivery of oxygen from a carboxylic acid terminus to C-20 followed by extrusion of the C2-unit as acetaldehyde, using cobalt complexes as substrates []. This entry represents the core domain of CibG.; GO: 0009236 cobalamin biosynthetic process; PDB: 3BY5_A 2W6K_A 2W6L_A 3EEQ_B.
Probab=25.83 E-value=65 Score=27.52 Aligned_cols=38 Identities=13% Similarity=0.183 Sum_probs=26.9
Q ss_pred eEcccceEEeccCCCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEE
Q 012909 40 TVGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEV 84 (453)
Q Consensus 40 ~~Gig~r~~av~~~~ed~~~la~~Aa~~aL~~agi~~~~Id~li~ 84 (453)
..|+|.++- ...+...++.+++|+++++++.+|+.|-.
T Consensus 3 ~~GiGcrr~-------~~~~~i~~ai~~~l~~~~~~~~~i~~ias 40 (121)
T PF01890_consen 3 VLGIGCRRG-------APAEEIEEAIEQALAEAGLSPRSIAAIAS 40 (121)
T ss_dssp EEEEEE-SS---------HHHHHHHHHHHHHHCT--GGGEEEEEE
T ss_pred EEEeCcCCC-------CCHHHHHHHHHHHHHHcCCChhhccEEEe
Confidence 468887652 34567788999999999999999998854
No 253
>cd02185 AroH Chorismate mutase (AroH) is one of at least five chorismate-utilizing enzymes present in microorganisms that catalyze the rearrangement of chorismate to prephenic acid, the first committed step in the biosynthesis of aromatic amino acids. In prokaryotes, chorismate mutase may be fused to prephenate dehydratase, prephenate dehydrogenase, or 3-deoxy-D-arabino-heptulosonat-7-phosphate (DAHP) as part of a bifunctional enzyme. The AroH domain forms a homotrimer with three-fold symmetry.
Probab=25.73 E-value=1.1e+02 Score=26.04 Aligned_cols=59 Identities=12% Similarity=0.076 Sum_probs=34.4
Q ss_pred CCHHHHHHHHHH----HHHHHcCCCcCCcCEEEEEcccCCCC-CccHHHHHHHHhcccCCCCeeEEeeC
Q 012909 55 EDVISMSLTVVT----SLLEKYKIDPTQIGRLEVGSETVIDK-SKSIKTFLMQIFEKYGNTDIEGVDST 118 (453)
Q Consensus 55 ed~~~la~~Aa~----~aL~~agi~~~~Id~li~~t~s~~~~-~~~~a~~l~~~Lgl~G~~~~~~~dv~ 118 (453)
++..+--.+|.+ +++++.+++++||-.++|..+.-.+. .|+ ..++.+|. ..+++.++..
T Consensus 12 ~nt~e~I~~at~eLl~~i~~~N~l~~edivSv~FT~T~DL~a~FPA---~aaR~~~~--~~~Vplmc~q 75 (117)
T cd02185 12 ENTAEEILEATRELLEEIIERNNIKPEDIISVIFTVTPDLDAAFPA---KAARELGG--WKYVPLMCAQ 75 (117)
T ss_pred CCCHHHHHHHHHHHHHHHHHHcCCCHHHEEEEEEEeCCcccccChH---HHHHhcCC--CCCcceeecC
Confidence 333444444444 55578999999999999844332332 333 34455543 4667766654
No 254
>PLN03169 chalcone synthase family protein; Provisional
Probab=24.75 E-value=1.8e+02 Score=30.02 Aligned_cols=81 Identities=15% Similarity=0.094 Sum_probs=45.1
Q ss_pred HHHHHHHHHHcCCCcCCcCEEEEEcccCCCCCccHHHHHHHHhcccCCCC-ee----EE-eeC-CcChhHHHHHHHHHHH
Q 012909 62 LTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTD-IE----GV-DST-NACYGGTAALFNCVNW 134 (453)
Q Consensus 62 ~~Aa~~aL~~agi~~~~Id~li~~t~s~~~~~~~~a~~l~~~Lgl~G~~~-~~----~~-dv~-~aC~gg~~AL~~A~~~ 134 (453)
...++++|+++|++++|||.+.+.-. ...+.+-..+++.||+ +.. +. .+ +.+ .++++-..+|..+.
T Consensus 284 ~~~i~~~L~~~gl~~~did~~~~v~H---q~n~~il~~v~~~Lgl--~~ek~~~s~~~l~~~GNtsSasip~~L~~~~-- 356 (391)
T PLN03169 284 EGFCKKLMKKAGLVEKDYNDLFWAVH---PGGPAILNRLEKKLKL--APEKLECSRRALMDYGNVSSNTIVYVLEYMR-- 356 (391)
T ss_pred HHHHHHHHHHcCCCCCCCCcceEEec---CCCHHHHHHHHHHcCC--CHHHHHHHHHHHHHhCCchHhHHHHHHHHHH--
Confidence 33568889999999999984322111 1224566678889998 433 22 12 233 24444445555443
Q ss_pred HHhCCC----CCCeEEEEEe
Q 012909 135 VESASW----DGRYGLVVCT 150 (453)
Q Consensus 135 v~sg~~----~~~~aLVv~~ 150 (453)
+.+.. +|+++|+++.
T Consensus 357 -~~~~~~~~~~gd~~ll~af 375 (391)
T PLN03169 357 -EELKKKGEEDEEWGLILAF 375 (391)
T ss_pred -HhhcccCCCCCcEEEEEEE
Confidence 33321 3577776654
No 255
>COG1148 HdrA Heterodisulfide reductase, subunit A and related polyferredoxins [Energy production and conversion]
Probab=24.37 E-value=93 Score=33.35 Aligned_cols=66 Identities=14% Similarity=0.119 Sum_probs=42.5
Q ss_pred cCEEEEEcccCCCCCcc--HHHHHHHHhcccCCCCeeEEeeCCcChhHHHHHHHHHHHHHhCCC------C--------C
Q 012909 79 IGRLEVGSETVIDKSKS--IKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCVNWVESASW------D--------G 142 (453)
Q Consensus 79 Id~li~~t~s~~~~~~~--~a~~l~~~Lgl~G~~~~~~~dv~~aC~gg~~AL~~A~~~v~sg~~------~--------~ 142 (453)
+|+|+++.+||--..|. +..+..+...+ +.+|..+.... |..-|.++|+..-. | .
T Consensus 54 ldrvVvaACsPr~he~~Frln~y~~E~ani--REqcswvH~~d-------AtekA~dllr~avakar~le~le~~~~~v~ 124 (622)
T COG1148 54 LDRVVVAACSPRLHEPTFRLNPYYLEIANI--REQCSWVHMDD-------ATEKAKDLLRMAVAKARKLEPLEEIKVEVS 124 (622)
T ss_pred hhheEEEecCCcccCCceeeCHHHhhhhhH--hhcceeeccch-------HHHHHHHHHHHHHHHHhhcCChhhHHHhhc
Confidence 88999999998654443 44566666666 56666665555 44555555543210 0 2
Q ss_pred CeEEEEEeecc
Q 012909 143 RYGLVVCTDTA 153 (453)
Q Consensus 143 ~~aLVv~~d~~ 153 (453)
+.+|||++-++
T Consensus 125 ~svLVIGGGvA 135 (622)
T COG1148 125 KSVLVIGGGVA 135 (622)
T ss_pred cceEEEcCcHH
Confidence 68999999887
No 256
>PRK12404 stage V sporulation protein AD; Provisional
Probab=23.58 E-value=5.2e+02 Score=26.26 Aligned_cols=89 Identities=16% Similarity=0.109 Sum_probs=45.9
Q ss_pred HHHHHHHH---HHHHHcCCCcCCcCEEEEEcccCCCCCccHHHHHHHHhccc--C----CCCeeEEeeC-------CcCh
Q 012909 59 SMSLTVVT---SLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKY--G----NTDIEGVDST-------NACY 122 (453)
Q Consensus 59 ~la~~Aa~---~aL~~agi~~~~Id~li~~t~s~~~~~~~~a~~l~~~Lgl~--G----~~~~~~~dv~-------~aC~ 122 (453)
-||=.|+. +=|++.|.+|++=|+|+.|--..+ ...+...|...=|.. . .+.+..||-. .||.
T Consensus 203 aMAPAA~dti~~h~~d~~~~~~~yDlI~TGDLg~v--G~~i~~~ll~~~g~~~~~~~~~DCG~~iyd~~~~~~aGgSGcg 280 (334)
T PRK12404 203 AMAPAAVDTIEAHLRDRQIDASYYDLIVTGDLGHV--GREIAKDLLHKHGVKVPEEQFQDCGLLIYREGQPVIAGASGPG 280 (334)
T ss_pred hhhHHHHHHHHHHHHHhCCChhhccEEEEcchHHH--HHHHHHHHHHHcCCCCCcccccccCeEEecCCCcccCCCcccc
Confidence 34444443 335678999999999997642221 112222232222320 0 1233455432 2332
Q ss_pred hH-HHHHHHHHHHHHhCCCCCCeEEEEEee
Q 012909 123 GG-TAALFNCVNWVESASWDGRYGLVVCTD 151 (453)
Q Consensus 123 gg-~~AL~~A~~~v~sg~~~~~~aLVv~~d 151 (453)
-. +.---.....++.|.+ +++|+|++-
T Consensus 281 csA~v~~g~~~~~~~~g~~--~rvL~v~TG 308 (334)
T PRK12404 281 CSATVTYGHLLNRMKRGEL--KRILVVATG 308 (334)
T ss_pred hHHHHHHHHHHHHHhcCCc--eEEEEEEch
Confidence 21 1222334566788988 999999654
No 257
>COG0533 QRI7 Metal-dependent proteases with possible chaperone activity [Posttranslational modification, protein turnover, chaperones]
Probab=23.41 E-value=1.5e+02 Score=30.15 Aligned_cols=56 Identities=5% Similarity=0.006 Sum_probs=33.7
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCEEEEEcccCCCCCcc--HHHHHHHHhcccCCCCeeEEeeC
Q 012909 59 SMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKS--IKTFLMQIFEKYGNTDIEGVDST 118 (453)
Q Consensus 59 ~la~~Aa~~aL~~agi~~~~Id~li~~t~s~~~~~~~--~a~~l~~~Lgl~G~~~~~~~dv~ 118 (453)
+-.....+++|+++|++.+|||+|-+. ..| -..++ +....++.|.+ .-+.+.+-|+
T Consensus 52 e~i~~li~~al~eA~~~~~dID~IA~T-~gP-GL~gaL~VG~~~Ak~LA~--a~~kPli~Vn 109 (342)
T COG0533 52 ENIPPLIEEALAEAGVSLEDIDAIAVT-AGP-GLGGALLVGATAAKALAL--ALNKPLIPVN 109 (342)
T ss_pred HHHHHHHHHHHHHcCCCcccCCEEEEe-cCC-CchhHHHHHHHHHHHHHH--HhCCCEeecc
Confidence 344566889999999999999998763 333 22332 23344455544 2345555444
No 258
>PRK13410 molecular chaperone DnaK; Provisional
Probab=23.27 E-value=1.5e+02 Score=33.10 Aligned_cols=70 Identities=11% Similarity=0.205 Sum_probs=45.8
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCEEEEEcccCCCCCccHHHHHHHHhcccCCCCeeEEeeCCcChhHHHHHHHHH
Q 012909 57 VISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCV 132 (453)
Q Consensus 57 ~~~la~~Aa~~aL~~agi~~~~Id~li~~t~s~~~~~~~~a~~l~~~Lgl~G~~~~~~~dv~~aC~gg~~AL~~A~ 132 (453)
..+-....++++|+++|+++++|+.|++...+. ..|.+...|...+|. .....++ ..-|.+-.+|++.+.
T Consensus 307 l~~r~~~~i~~~L~~ag~~~~dId~VvLVGGss--RiP~V~~~l~~~fg~---~~~~~~n-pdeaVA~GAAi~aa~ 376 (668)
T PRK13410 307 LLDRLLRPVKRALKDAGLSPEDIDEVVLVGGST--RMPMVQQLVRTLIPR---EPNQNVN-PDEVVAVGAAIQAGI 376 (668)
T ss_pred HHHHHHHHHHHHHHHcCCChhhCcEEEEECCcc--ccHHHHHHHHHHcCC---CcccCCC-CchHHHHhHHHHHHh
Confidence 455566778899999999999999988543222 357788888888874 2222221 234555556666543
No 259
>TIGR03722 arch_KAE1 universal archaeal protein Kae1. This family represents the archaeal protein Kae1. Its partner Bud32 is fused with it in about half of the known archaeal genomes. The pair, which appears universal in the archaea, corresponds to EKC/KEOPS complex in eukaryotes. A recent characterization of the member from Pyrococcus abyssi, as an iron-binding, atypical DNA-binding protein with an apurinic lyase activity, challenges the common annotation of close homologs as O-sialoglycoprotein endopeptidase. The latter annotation is based on a characterized protein from the bacterium Pasteurella haemolytica.
Probab=22.33 E-value=1e+02 Score=30.97 Aligned_cols=26 Identities=12% Similarity=0.213 Sum_probs=22.2
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEEEc
Q 012909 61 SLTVVTSLLEKYKIDPTQIGRLEVGS 86 (453)
Q Consensus 61 a~~Aa~~aL~~agi~~~~Id~li~~t 86 (453)
-..+.+++|+++|++++|||.|.++.
T Consensus 49 l~~~i~~~l~~~~~~~~did~Iavt~ 74 (322)
T TIGR03722 49 APKLIKEALEEAGVSLEDIDAVAFSQ 74 (322)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEec
Confidence 34458999999999999999999865
No 260
>KOG2708 consensus Predicted metalloprotease with chaperone activity (RNAse H/HSP70 fold) [Posttranslational modification, protein turnover, chaperones]
Probab=22.05 E-value=1.2e+02 Score=29.16 Aligned_cols=67 Identities=13% Similarity=0.138 Sum_probs=40.0
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCEEEEEcccCCCCCc-cHHHHHHHHhcccCCCCeeEEeeCCcChhHHHHHHHHHHHHHh
Q 012909 59 SMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSK-SIKTFLMQIFEKYGNTDIEGVDSTNACYGGTAALFNCVNWVES 137 (453)
Q Consensus 59 ~la~~Aa~~aL~~agi~~~~Id~li~~t~s~~~~~~-~~a~~l~~~Lgl~G~~~~~~~dv~~aC~gg~~AL~~A~~~v~s 137 (453)
.-...-++.+|++++++++|||.+-+ |--|-...| .....+++-|.+ --+.+.+ ++..+..+|+-
T Consensus 51 ~~il~Lv~~al~ea~v~~~diD~icy-TKGPGmgaPL~~vaivaRtlsl--lw~kPlv-----------~VNHCigHIEM 116 (336)
T KOG2708|consen 51 AWILGLVKQALEEAGVTSDDIDCICY-TKGPGMGAPLSVVAIVARTLSL--LWNKPLV-----------GVNHCIGHIEM 116 (336)
T ss_pred HHHHHHHHHHHHHcCCChhhCCEEEE-cCCCCCCCchhhHHHHHHHHHH--HhCCCcc-----------cchhhhhhhhh
Confidence 33445578889999999999998876 433333333 334455666655 2334433 33445566776
Q ss_pred CC
Q 012909 138 AS 139 (453)
Q Consensus 138 g~ 139 (453)
|.
T Consensus 117 GR 118 (336)
T KOG2708|consen 117 GR 118 (336)
T ss_pred cc
Confidence 63
No 261
>PLN03168 chalcone synthase; Provisional
Probab=21.99 E-value=2.2e+02 Score=29.53 Aligned_cols=36 Identities=8% Similarity=-0.050 Sum_probs=23.0
Q ss_pred HHH-HHHHHHHHHHHHHHhhhhcCCCCccCccEEEecCcc
Q 012909 202 CYL-MALDSCYKYFCQKFEKLEGRQFSMLDVDYFVFHSPY 240 (453)
Q Consensus 202 ~y~-~al~~~~~~~~~~~~~~~~~~~~~~d~d~~v~H~p~ 240 (453)
.|. .+.+.+.+...+.+ +++|+.++|||++|+.+-.
T Consensus 96 ~~~~~a~~La~~Aa~~AL---~~ag~~~~dId~lI~~T~T 132 (389)
T PLN03168 96 IVVVQVPKLAAEAAQKAI---KEWGGRKSDITHIVFATTS 132 (389)
T ss_pred HHHHHHHHHHHHHHHHHH---HHcCCCHHHCCEEEEECCC
Confidence 354 34444444444444 5678999999999987543
No 262
>PTZ00340 O-sialoglycoprotein endopeptidase-like protein; Provisional
Probab=21.61 E-value=1.4e+02 Score=30.55 Aligned_cols=58 Identities=17% Similarity=0.138 Sum_probs=34.2
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCEEEEEcccCCCCCccHHHHHHHHhcccCCCCeeEEeeC
Q 012909 59 SMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGNTDIEGVDST 118 (453)
Q Consensus 59 ~la~~Aa~~aL~~agi~~~~Id~li~~t~s~~~~~~~~a~~l~~~Lgl~G~~~~~~~dv~ 118 (453)
+-.....+++|+++|+++++||.|.|..-=+....--++.-.++.|.. .-+++.+.++
T Consensus 51 ~~l~~~i~~~l~~a~~~~~did~Iavt~GPGl~~~LrVG~~~Ak~LA~--a~~~PligV~ 108 (345)
T PTZ00340 51 EHILSLVKEALEEAKITPSDISLICYTKGPGMGAPLSVGAVVARTLSL--LWGKPLVGVN 108 (345)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEecCCCcHhhHHHHHHHHHHHHH--HcCCCEeecc
Confidence 344566789999999999999999875422211111233334444443 3445555554
No 263
>TIGR03285 methan_mark_14 putative methanogenesis marker protein 14. Members of this protein family, to date, are found in a completed prokaryotic genome if and only if the species is one of the archaeal methanogens. The exact function is unknown, but likely is linked to methanogenesis or a process closely connected to it.
Probab=21.29 E-value=1.1e+02 Score=31.41 Aligned_cols=35 Identities=14% Similarity=0.124 Sum_probs=31.2
Q ss_pred CCCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEEc
Q 012909 52 SEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGS 86 (453)
Q Consensus 52 ~~~ed~~~la~~Aa~~aL~~agi~~~~Id~li~~t 86 (453)
...|++.+|......+++++++++.+|+|.|+=+|
T Consensus 60 LtresV~elV~dtl~e~~k~A~l~i~DL~FVVRST 94 (445)
T TIGR03285 60 LTRESVAELVKDTLKESLKKAGLDIDDLDFVVRST 94 (445)
T ss_pred ccHHHHHHHHHHHHHHHHHHcCCChhhccEEEecc
Confidence 44688999999999999999999999999998655
No 264
>PLN02854 3-ketoacyl-CoA synthase
Probab=21.14 E-value=3.8e+02 Score=29.02 Aligned_cols=87 Identities=10% Similarity=0.091 Sum_probs=49.5
Q ss_pred HHHHHHHHHHHcCCCc------CCcCEEEEEcccCCCCCccHHHHHHHHhcccCC-CCeeEEeeCCcChhHHHHHHHHHH
Q 012909 61 SLTVVTSLLEKYKIDP------TQIGRLEVGSETVIDKSKSIKTFLMQIFEKYGN-TDIEGVDSTNACYGGTAALFNCVN 133 (453)
Q Consensus 61 a~~Aa~~aL~~agi~~------~~Id~li~~t~s~~~~~~~~a~~l~~~Lgl~G~-~~~~~~dv~~aC~gg~~AL~~A~~ 133 (453)
+...+++.|.++|+.+ ++||.+++.. ..+.+-..+++.||+... .......+..--+.+.+.+-.+.+
T Consensus 387 ~~~~i~~~L~~~gl~~~~pd~~~didhf~iHq-----ggr~IId~v~k~LgL~~~~~e~sr~tL~rfGNTSSASI~~~L~ 461 (521)
T PLN02854 387 FVTLVRRKLLKAKVKPYIPDFKLAFEHFCIHA-----GGRAVLDELQKNLQLSDWHMEPSRMTLHRFGNTSSSSLWYELA 461 (521)
T ss_pred HHHHHHHHHHHcCCCccCCcccccCcEEEECC-----CCHHHHHHHHHHcCCCcccccchHHHhhhcCChHhhHHHHHHH
Confidence 4667888899999987 5899887643 234555678899998200 122222222222223333444444
Q ss_pred HH-HhCC-CCCCeEEEEEeec
Q 012909 134 WV-ESAS-WDGRYGLVVCTDT 152 (453)
Q Consensus 134 ~v-~sg~-~~~~~aLVv~~d~ 152 (453)
++ +.|. .+|++++.++.-.
T Consensus 462 ~~~~kGrik~GD~Vl~iaFGs 482 (521)
T PLN02854 462 YTEAKGRVSAGDRVWQIAFGS 482 (521)
T ss_pred HHHHcCCCCCCCEEEEEEEch
Confidence 33 3443 2678888887544
No 265
>PF05378 Hydant_A_N: Hydantoinase/oxoprolinase N-terminal region; InterPro: IPR008040 This domain is found at the N terminus of the hydantoinase/oxoprolinase IPR002821 from INTERPRO family.
Probab=20.77 E-value=1.1e+02 Score=27.98 Aligned_cols=36 Identities=31% Similarity=0.480 Sum_probs=30.3
Q ss_pred CCCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEEcc
Q 012909 52 SEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSE 87 (453)
Q Consensus 52 ~~~ed~~~la~~Aa~~aL~~agi~~~~Id~li~~t~ 87 (453)
...+++..=..+|.++++++.++++++|+.+.+||+
T Consensus 30 Tt~~d~~~gi~~al~~l~~~~~~~~~~i~~v~~gTT 65 (176)
T PF05378_consen 30 TTPDDPAEGILEALDALLEESGIDPSDIDRVRHGTT 65 (176)
T ss_pred CCCcCHHHHHHHHHHhhhcccCCChhhCcEEEeccH
Confidence 444677777788999999999999999999999883
No 266
>PRK07027 cobalamin biosynthesis protein CbiG; Provisional
Probab=20.56 E-value=1e+02 Score=26.47 Aligned_cols=58 Identities=7% Similarity=0.005 Sum_probs=37.3
Q ss_pred eeEcccceEEeccCCCCCHHHHHHHHHHHHHHHcCCCcCCcCEEEEEcccCCCCCccHHHHHHHHhcc
Q 012909 39 YTVGLGQDCMAFCSEVEDVISMSLTVVTSLLEKYKIDPTQIGRLEVGSETVIDKSKSIKTFLMQIFEK 106 (453)
Q Consensus 39 ~~~Gig~r~~av~~~~ed~~~la~~Aa~~aL~~agi~~~~Id~li~~t~s~~~~~~~~a~~l~~~Lgl 106 (453)
+..|||.|+= ...+...++.+++|+++|+++..|+.|-....-. ..|++ ..+++.||.
T Consensus 4 ~~vGIGcr~~-------~~~e~i~~ai~~~L~~~~l~~~si~~lasi~~K~--~E~~L-~~~A~~lg~ 61 (126)
T PRK07027 4 VALGIGCRRG-------VPAEQIEAAIRAALAQRPLASADVRVVATLDLKA--DEAGL-LALCARHGW 61 (126)
T ss_pred EEEeeccCCC-------CCHHHHHHHHHHHHHHcCCCHHHhheeEehhhhc--CCHHH-HHHHHHhCC
Confidence 3568887652 1334467889999999999999999885432111 12322 345666675
Done!