BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 012910
         (453 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q6CGU8|MCH1_YARLI Probable transporter MCH1 OS=Yarrowia lipolytica (strain CLIB 122 /
           E 150) GN=MCH1 PE=3 SV=1
          Length = 486

 Score = 58.9 bits (141), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 50/155 (32%), Positives = 89/155 (57%), Gaps = 17/155 (10%)

Query: 277 SSLISLWSIWNFLGRFGAGYVSDYFL-HVKEWARPLFM-VITLAAMSIGHLIIASGL--- 331
           S+ +SL++ ++ + R   G+ S+    HV   +RP+ + VI L A  I HL++ SG+   
Sbjct: 313 STHVSLFATFSTVSRLVVGFSSEAMESHV---SRPVLLSVIALVAACI-HLMVPSGIFTV 368

Query: 332 -PGALYAG--SILVGVCYGSQWSLMPTIASEIFGVLQMGTIFNTITIANPVGSYIFSVRV 388
              A Y    +I+ G  YGS ++L+PTI ++++G+  +GTI+ +  +A  VGS  + + +
Sbjct: 369 FDNAKYFSVVTIVNGFSYGSSFTLVPTIVTKVWGIANLGTIWGSFILALAVGSLGYGL-L 427

Query: 389 VGYIYDREAS-GEGNK---CTGTHCFMLSFFIMGS 419
              +YD  +  G G+    C+G HC+ L+F I G+
Sbjct: 428 FAKVYDAASEVGVGSMSQVCSGVHCYGLTFVITGT 462


>sp|Q07376|MCH1_YEAST Probable transporter MCH1 OS=Saccharomyces cerevisiae (strain ATCC
           204508 / S288c) GN=MCH1 PE=1 SV=1
          Length = 486

 Score = 48.9 bits (115), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 34/130 (26%), Positives = 64/130 (49%), Gaps = 3/130 (2%)

Query: 276 TSSLISLWSIWNFLGRFGAGYVSDYFLHVK---EWARPLFMVITLAAMSIGHLIIASGLP 332
           ++ L+S +++ +   R   G V+D+F   K   +W    F+ + + A      + +S  P
Sbjct: 318 STKLLSTYALSSTFTRLLTGIVADFFAKKKISIKWILLTFLSLGVCAQLFLLKMTSSASP 377

Query: 333 GALYAGSILVGVCYGSQWSLMPTIASEIFGVLQMGTIFNTITIANPVGSYIFSVRVVGYI 392
             L     LVG+ YG  +++ PT+   ++G    GT++ ++ IA  +GS IF +    + 
Sbjct: 378 WGLVPTGSLVGIVYGGLFTVYPTLVLLVWGERSFGTVYGSLLIAPAIGSMIFCMLYAKFY 437

Query: 393 YDREASGEGN 402
             R  SG G+
Sbjct: 438 DSRCMSGGGD 447


>sp|Q6FWD4|MCH1_CANGA Probable transporter MCH1 OS=Candida glabrata (strain ATCC 2001 /
           CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=MCH1 PE=3
           SV=1
          Length = 489

 Score = 48.1 bits (113), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 48/217 (22%), Positives = 95/217 (43%), Gaps = 27/217 (12%)

Query: 209 PSEPDVGTDTNDATTSLW-----GGDLDLLQAICTLEFWILSFAMACGMGSGLATVNNIS 263
           PS+ DV    +D   S          + L++       +I    + C +G     + N+ 
Sbjct: 243 PSDNDVENHYDDNEQSRLLHATHAQQMTLMKVFRDPVLYIFGATIFCALGPLEMFIANMG 302

Query: 264 QIGGSL--GYSSFETSSLISLWSIWNFLGRFGAGYVSDYF----LHVKEW---------- 307
            +   L  G+    +S+L+S++++ + L R G G   DYF    L VK W          
Sbjct: 303 SLTNVLAGGHEPAMSSALLSIYALTSTLTRLGTGLTVDYFNKRQLSVK-WILLLFLVVGL 361

Query: 308 -ARPLFMVITLAAMSIGHLIIASGLPGALYAGSILVGVCYGSQWSLMPTIASEIFGVLQM 366
             +    +++++++   H++    +   L+   I+ G+ YG  +++ PTI   ++G    
Sbjct: 362 VTQGKIYMLSMSSLDHSHMV---TINRKLFYIGIMQGIAYGGLFTIYPTITLMVWGEKMF 418

Query: 367 GTIFNTITIANPVGSYIFSVRVVGYIYDREASGEGNK 403
           GT + T+ IA  +GS + S  +   +YD E +    +
Sbjct: 419 GTAYGTLMIAPALGSAL-SCLIYADVYDSECANSTTR 454


>sp|Q96TW9|MCH1_HANAN Probable transporter MCH1 OS=Hansenula anomala GN=MCH1 PE=3 SV=1
          Length = 489

 Score = 45.8 bits (107), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 48/209 (22%), Positives = 95/209 (45%), Gaps = 7/209 (3%)

Query: 208 LPSEPDVGTDTNDATTSLWGGDLDLLQAICTLEFWILSFAMACGMGSGLATVNNISQIGG 267
           L ++P+   + ND            L+ I  +  ++L F++   +G     + N+  +  
Sbjct: 233 LLTDPNQEHENNDDLVP--NHKSKFLKFIKDISTYVLLFSLLLSIGPSEMYITNMGSLVK 290

Query: 268 SLGYSSFETSSLISLWSIWNFLGRFGAGYVSDYFLHVKEWARP--LFMVITLAAMSIGHL 325
           ++  +S   S  +++ ++++ L R   G +SD+ +   + +R   L  +I L   +   +
Sbjct: 291 AITPNSL-ISDQVAIHAVFSTLSRLSLGALSDFLVTNYQISRSWLLLSIIVLGFFTQIFI 349

Query: 326 IIASGLPGALYAGSILVGVCYGSQWSLMPTIASEIFGVLQMGTIFNTITIANPVGSYIFS 385
             ++ +    Y  S L G  YG  ++L PT+   I+G    G+ + +  IA  +GS  F 
Sbjct: 350 ATSTFVKDQYYIISALSGFSYGGLFTLYPTVIFSIWGPEIFGSAWGSFMIAPAIGSTTFG 409

Query: 386 VRVVGYIYDREASGEGNKCTGTHCFMLSF 414
           + V G +YD  A G   + T  +C  L F
Sbjct: 410 M-VFGLVYD-SACGVFAESTTGNCVSLVF 436


>sp|Q4IM48|MCH1_GIBZE Probable transporter MCH1 OS=Gibberella zeae (strain PH-1 / ATCC
           MYA-4620 / FGSC 9075 / NRRL 31084) GN=MCH1 PE=3 SV=1
          Length = 572

 Score = 44.3 bits (103), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 54/212 (25%), Positives = 87/212 (41%), Gaps = 38/212 (17%)

Query: 242 WILSFAMACGMGSGLATVNNISQIGGSLGYSSFE-------TSSLISLWSIWNFLGRFGA 294
           W  + A    +G G A +NN+  I G+L     E        ++ +S++ I N   R   
Sbjct: 331 WPFALAFLLIVGPGEAFINNLGTIIGTLTPPEMEGWSHRTSAATHVSIFGITNTASRIFI 390

Query: 295 GYVSDYFL------HVK------------EWARPLFMVITLAAMSIGHLIIASGL----P 332
           G ++D         HV+              +R  FM    + +SIG LI+ASGL     
Sbjct: 391 GTLTDLLAPYPHTQHVQGPSTRSAVSSRFSISRVAFMAFFASMLSIGLLILASGLVQNHA 450

Query: 333 GALYAGSILVGVCYGSQWSLMPTIASEIFGVLQMGTIFNTITIANPVGS----YIFSVRV 388
              +  S LVG  YG+ +SL P + + I+GV    T +  I +    GS     ++S   
Sbjct: 451 ERFWLVSGLVGAGYGAIFSLTPLMVTIIWGVENFATNYGLIGMLPAAGSTFWGLVYSATY 510

Query: 389 VGYIYDREASGEGNK-----CTGTHCFMLSFF 415
                  +A  EG+      C G  C+  +++
Sbjct: 511 QNGANKSKAGPEGSDRDDLFCYGEQCYAPTYW 542


>sp|Q6BN11|MCH1_DEBHA Probable transporter MCH1 OS=Debaryomyces hansenii (strain ATCC
           36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
           GN=MCH1 PE=3 SV=2
          Length = 486

 Score = 41.6 bits (96), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 46/169 (27%), Positives = 79/169 (46%), Gaps = 20/169 (11%)

Query: 242 WILSFAMACGMGSGLATVNNISQIGGSLGYSSFETSSL---ISLWSIWNFLGRFGAGYVS 298
           W+L  ++   +G   +  NN+    GS+  +S   S+L   +S+ +  + + R   G +S
Sbjct: 290 WLLLASLILNIGPMESFQNNL----GSIIINSNSESNLSDQVSIMAASSTVTRLAMGGLS 345

Query: 299 DYFLHVKE---WARPLFMVITLAAMSIGHLIIASGLPGALYAGSILVGVCYGSQWSLMPT 355
           DY    K      R   ++I LA   +G  ++      ++   SIL G  YG  +++ PT
Sbjct: 346 DYLSSSKRKFPICRVNLLIINLAIGIVGQFMVTRSTRFSIV--SILNGSSYGGLFTIYPT 403

Query: 356 IASEIFGVLQMGTIFNTITIANPVGSYIFSVRVVGYIYDREASGEGNKC 404
           I + I+G+  MG+ + +  IA  +GS  FS+      Y  E     NKC
Sbjct: 404 IVASIWGIDMMGSTWGSFMIAPAIGSIGFSI-----FYGNEVD---NKC 444


>sp|Q4WVT3|MCH1_ASPFU Probable transporter mch1 OS=Neosartorya fumigata (strain ATCC
           MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=mch1 PE=3
           SV=1
          Length = 619

 Score = 40.4 bits (93), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 27/87 (31%), Positives = 45/87 (51%), Gaps = 13/87 (14%)

Query: 332 PGALYAGSILVGVCYGSQWSLMPTIASEIFGVLQMGTIFNTITIANPVGSYIFSVRVVGY 391
           PG  +  + L+G+ YGS +SL+P I S ++GV   GT +  + +    G+ ++     G 
Sbjct: 506 PGLSHVTTALIGLGYGSAFSLVPIIISVVWGVENFGTNWGIVAMVPAAGAAMW-----GV 560

Query: 392 IYDR---EASGEGN-----KCTGTHCF 410
           IY R   +A+  GN     +C G  C+
Sbjct: 561 IYSRGYQDATDGGNGSPDGQCHGWRCY 587


>sp|Q9P3K8|MCH1_NEUCR Probable transporter MCH1 OS=Neurospora crassa (strain ATCC 24698 /
           74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=mch-1
           PE=3 SV=1
          Length = 598

 Score = 38.5 bits (88), Expect = 0.095,   Method: Compositional matrix adjust.
 Identities = 59/293 (20%), Positives = 116/293 (39%), Gaps = 45/293 (15%)

Query: 176 TSFCEEDELTDDPHEMHAEKMHVRQDPVGYHRLPSEPDVGTDT-----NDATTSLWGGDL 230
           ++F +     D P     E+  +  +  G    PS+PD  +D+     N      W  + 
Sbjct: 288 STFLQGSWTADRPGYGAIEQSPLDMESAGILD-PSKPDNDSDSEEEDDNARIKKTWVLNA 346

Query: 231 DLLQAICTLEFWILSFAMACGMGSGLATVNNISQIGGSLGYSSFE-------TSSLISLW 283
           +  + +     W  +      +G G A +NN+  +  +L     +        ++ +S+ 
Sbjct: 347 ETRRFLTDHTMWCFALGFFLMIGPGEAFINNLGTVIKTLYPPHLKFVGEPTSAATHVSIV 406

Query: 284 SIWNFLGRFGAGYVSDYFL------HVK------------EWARPLFMVITLAAMSIGHL 325
            I + L R   G ++D         HV+              +R  F++     +S+G  
Sbjct: 407 GITSTLVRLLTGSLTDLLAPSPQARHVQITSSGTLERKRFSLSRVSFLLFFAVTLSVGLA 466

Query: 326 IIASGL----PGALYAGSILVGVCYGSQWSLMPTIASEIFGVLQMGTIFNTITIANPVGS 381
            +ASG         +  S LVG  YG+ +SL P I + I+GV    T +  + +   +G+
Sbjct: 467 TLASGWIQNHGERFWVASGLVGAGYGAVFSLTPIIITVIWGVENFATNWGIVAMFPALGA 526

Query: 382 ----YIFSVRVVGYIYDREASGEGNK----CTGTHCFMLSFFIMGSA--TLCG 424
                ++S      +    ++G+G +    C G+ C+  +F+ M ++    CG
Sbjct: 527 TFWGLVYSAVYQSGVEKAASNGQGGEEDQFCYGSECYASAFWAMAASVWVACG 579


>sp|Q59MJ2|MCH1_CANAL Probable transporter MCH1 OS=Candida albicans (strain SC5314 / ATCC
           MYA-2876) GN=MCH1 PE=3 SV=1
          Length = 436

 Score = 38.5 bits (88), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 22/59 (37%), Positives = 35/59 (59%), Gaps = 5/59 (8%)

Query: 339 SILVGVCYGSQWSLMPTIASEIFGVLQMGTIFNTITIANPVGSYIFSVRVVGYIYDREA 397
           +IL GV YG  +++ PTI + I+G+  MG+ + +  +A  +GS IFS+      Y R A
Sbjct: 343 AILNGVSYGGMFTIYPTIVASIWGIDIMGSTWGSFMVAPALGSVIFSM-----FYGRNA 396


>sp|Q5AXV1|MCH1_EMENI Probable transporter mch1 OS=Emericella nidulans (strain FGSC A4 /
           ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=mch1 PE=3
           SV=2
          Length = 615

 Score = 37.7 bits (86), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 24/73 (32%), Positives = 38/73 (52%), Gaps = 4/73 (5%)

Query: 341 LVGVCYGSQWSLMPTIASEIFGVLQMGTIFNTITIANPVGSYIFSVRVVGYIYDREASG- 399
           LVG+ YGS +SL+P I S ++GV   GT +  + +    G+ ++ V +    Y   A G 
Sbjct: 512 LVGLGYGSIFSLVPIIISVVWGVENFGTNWGIVAMFPAAGAAMWGV-IYSRAYQSAADGS 570

Query: 400 --EGNKCTGTHCF 410
             +  +C G  CF
Sbjct: 571 PTDDGQCHGWKCF 583


>sp|P37662|YHJX_ECOLI Inner membrane protein YhjX OS=Escherichia coli (strain K12)
           GN=yhjX PE=1 SV=1
          Length = 402

 Score = 35.4 bits (80), Expect = 0.94,   Method: Compositional matrix adjust.
 Identities = 81/381 (21%), Positives = 146/381 (38%), Gaps = 44/381 (11%)

Query: 10  NTRWVSTVASIWIQCTSGSLYTFSIYSPALKTTQHYDQTTLDTVSVFKDIGANTGTLS-G 68
            TRW++ + +I  Q   GS+YT+S+++ AL          LD  +    +  + G LS G
Sbjct: 8   RTRWLTLIGTIITQFALGSVYTWSLFNGAL-------SAKLD--APVSQVAFSFGLLSLG 58

Query: 69  VLYTYSTSDHSSHHPRQQRLTRLLGPWVVLLVGAIQCFAGYFLMWASVVGLIPRPPVPVM 128
           +  + S +         +R+T   G    +L+G      G+FL   S   ++      V+
Sbjct: 59  LAISSSVAGKLQERFGVKRVTMASG----ILLGL-----GFFLTAHSDNLMMLWLSAGVL 109

Query: 129 CLFMLFAAHGMTFFNTADVVTSVRNFPTYSGTAVGIMKGSDSDRTSETSFCEEDELTDDP 188
                 A + +T  N       V+ FP   G       GS    +    F +   L    
Sbjct: 110 VGLADGAGYLLTLSNC------VKWFPERKGLISAFAIGSYGLGSLGFKFIDTQLL---- 159

Query: 189 HEMHAEKMHVRQDPV-------GYHRLPSEPDVGTDTNDATTSLWGGDLDLLQAICTLEF 241
             +  EK  V    +       G   +   P     T++        D  L +++   ++
Sbjct: 160 ETVGLEKTFVIWGAIALLMIVFGATLMKDAPKQEVKTSNGVVE---KDYTLAESMRKPQY 216

Query: 242 WILSFAMACGMGSGLATVNNISQIGGSLGY-SSFETSSLISLWSIWNFLGRFGAGYVSDY 300
           W+L+        SGL  +     I  SL +      ++ +++ SI N  GR   G +SD 
Sbjct: 217 WMLAVMFLTACMSGLYVIGVAKDIAQSLAHLDVVSAANAVTVISIANLSGRLVLGILSDK 276

Query: 301 FLHVKEWARPLFMVITLAAMSIGHLIIASGLPGALYAGSILVGVCYGSQWSLMPTIASEI 360
              ++     +  VI+L  M+   L+ A       +A    V   +G   ++ P++ SE 
Sbjct: 277 IARIR--VITIGQVISLVGMA--ALLFAPLNAVTFFAAIACVAFNFGGTITVFPSLVSEF 332

Query: 361 FGVLQMGTIFNTITIANPVGS 381
           FG+  +   +  I +   +GS
Sbjct: 333 FGLNNLAKNYGVIYLGFGIGS 353


>sp|Q08777|MCH5_YEAST Riboflavin transporter MCH5 OS=Saccharomyces cerevisiae (strain
           ATCC 204508 / S288c) GN=MCH5 PE=1 SV=2
          Length = 521

 Score = 35.4 bits (80), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 30/106 (28%), Positives = 50/106 (47%), Gaps = 3/106 (2%)

Query: 268 SLGYSSFETSSLISLWSIWNFLGRFGAGYVSDYFLHVKEWARPLFMVITLAAMSIGHLII 327
           S G S+ +  +LI + ++    GR+  GY+SD F         L  +  +  M +G L  
Sbjct: 359 SHGISANDAYTLIMIINVCGIPGRWVPGYLSDKFGRFNVAIATLLTLFIV--MFVGWLPF 416

Query: 328 ASGLPGALYAGSILVGVCYGSQWSLMPTIASEIFGVLQMGTIFNTI 373
            + L   +Y  S L G C GS +SL+P    +I    + G  ++T+
Sbjct: 417 GTNLTN-MYVISALYGFCSGSVFSLLPVCCGQISKTEEFGKRYSTM 461


>sp|Q03795|YM30_YEAST Uncharacterized membrane protein YMR155W OS=Saccharomyces
           cerevisiae (strain ATCC 204508 / S288c) GN=YMR155W PE=1
           SV=1
          Length = 547

 Score = 34.3 bits (77), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 37/155 (23%), Positives = 65/155 (41%), Gaps = 23/155 (14%)

Query: 280 ISLWSIWNFLGRFGAGYVSDYFLHVKEWARPLFMVIT-----LAAMSIGH--------LI 326
           ++L S+ +F GR  +G +SD+ +   +  R   +VI      LA+  I H         +
Sbjct: 368 VTLLSLLSFCGRLSSGPISDFLVKKFKAQRLWNIVIASLLVFLASNKISHDFSSIEDPSL 427

Query: 327 IASGLPGALYAGSILVGVCYGSQWSLMPTIASEIFGVLQMGTIFNTITIANPVGSYIFSV 386
            AS     +   S + G  +G  +   P+I ++ FG     T++  +T        +FSV
Sbjct: 428 RASKSFKNISVCSAIFGYSFGVLFGTFPSIVADRFGTNGYSTLWGVLTTGG-----VFSV 482

Query: 387 RVVGYIYDRE-----ASGEGNKCTGTHCFMLSFFI 416
            V   I  R+        +GN   G  C+  +F +
Sbjct: 483 SVFTDILGRDFKANTGDDDGNCKKGVLCYSYTFMV 517


>sp|P78509|RELN_HUMAN Reelin OS=Homo sapiens GN=RELN PE=1 SV=3
          Length = 3460

 Score = 32.7 bits (73), Expect = 5.7,   Method: Compositional matrix adjust.
 Identities = 30/116 (25%), Positives = 53/116 (45%), Gaps = 6/116 (5%)

Query: 177 SFCEEDELTD---DPH--EMHAEKMHVRQDPVGYHRLPSEPDVGTDTNDATTSLWGGDLD 231
             CE+   TD    PH  E+H++ + +R D   YH+L   P++  + N+  T    G + 
Sbjct: 176 QLCEQGAPTDVTVHPHLAEIHSDSIILRDDFDSYHQLQLNPNIWVECNNCETGEQCGAIM 235

Query: 232 LLQAICTLEFWILSFAMACGMGSGLATVNNISQIGGSLGYSSFETSSLISLWSIWN 287
              A+   E +     +  G+ +  A+V   S   GS  + S+   S+I L++  N
Sbjct: 236 HGNAVTFCEPYGPRELITTGLNTTTASVLQFSIGSGSCRF-SYSDPSIIVLYAKNN 290


>sp|Q752I1|MCH1_ASHGO Probable transporter MCH1 OS=Ashbya gossypii (strain ATCC 10895 /
           CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=MCH1 PE=3 SV=1
          Length = 450

 Score = 32.3 bits (72), Expect = 7.3,   Method: Compositional matrix adjust.
 Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 1/64 (1%)

Query: 338 GSILVGVCYGSQWSLMPTIASEIFGVLQMGTIFNTITIANPVGSYIFSVRVVGYIYDREA 397
            S L G CYG  +++ P +   ++G    GT + +  I   VGS +F +    +I+D   
Sbjct: 352 ASALSGACYGGLFTVSPILTLAVWGDAVFGTAYGSFMITPAVGSILFGL-TYAHIFDANC 410

Query: 398 SGEG 401
           +  G
Sbjct: 411 TPSG 414


>sp|Q58091|Y678_METJA Uncharacterized protein MJ0678 OS=Methanocaldococcus jannaschii
           (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
           100440) GN=MJ0678 PE=4 SV=1
          Length = 320

 Score = 32.0 bits (71), Expect = 8.9,   Method: Compositional matrix adjust.
 Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 6/65 (9%)

Query: 237 CTLEFWILSFAMACGMGSGLATVNNISQIGGSLGYSSFETSSLISLWSIWNFLGRFGAGY 296
            TL+FW +  A++ G+   L+TV+NIS    S+        +L+   +++  L   GAGY
Sbjct: 200 ITLDFWSIIIALSAGIAGSLSTVSNIS----SIAVGVMIAIALLPPLAVFGLL--IGAGY 253

Query: 297 VSDYF 301
           V   F
Sbjct: 254 VEQSF 258


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.324    0.137    0.430 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 170,526,065
Number of Sequences: 539616
Number of extensions: 7239820
Number of successful extensions: 20778
Number of sequences better than 100.0: 31
Number of HSP's better than 100.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 21
Number of HSP's that attempted gapping in prelim test: 20742
Number of HSP's gapped (non-prelim): 48
length of query: 453
length of database: 191,569,459
effective HSP length: 121
effective length of query: 332
effective length of database: 126,275,923
effective search space: 41923606436
effective search space used: 41923606436
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 63 (28.9 bits)