BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 012924
(453 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FY06|PPF1_PEA Inner membrane protein PPF-1, chloroplastic OS=Pisum sativum
GN=PPF-1 PE=2 SV=2
Length = 442
Score = 619 bits (1597), Expect = e-176, Method: Compositional matrix adjust.
Identities = 329/439 (74%), Positives = 363/439 (82%), Gaps = 19/439 (4%)
Query: 1 MTKTLISSPPFVGTPLPSPSSSLSRHGLHRL--PNRRLASTRVRLSFQEIPPILSLDSSI 58
M KTLISSP F+GTPLPS LHR PNR T+V+ SF ++PPI S+ S+
Sbjct: 1 MAKTLISSPSFLGTPLPS---------LHRTFSPNRTRLFTKVQFSFHQLPPIQSVSHSV 51
Query: 59 DLNSVFSRTESLLYTLADAAVSLDSASGGAASTSADGATQKNGGWFGFISEAMEFVLKIL 118
DL+ +F+R E LLYTLADA V+ A+ S D A QKNGGWFGFIS+ MEFVLK+L
Sbjct: 52 DLSGIFARAEGLLYTLADATVAA------DAAASTDVAAQKNGGWFGFISDGMEFVLKVL 105
Query: 119 KDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQ 178
KDG+ +VHVPYSYGFAIILLTVIVK AT PLTK+QVESTLAMQNLQPKIKAIQ+RYAGNQ
Sbjct: 106 KDGLSSVHVPYSYGFAIILLTVIVKAATLPLTKQQVESTLAMQNLQPKIKAIQERYAGNQ 165
Query: 179 ERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSG 238
ERIQLETSRLY QAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGF WIPSL G
Sbjct: 166 ERIQLETSRLYTQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFLWIPSLGG 225
Query: 239 PTTIAARQSGSGISWLLPFVDGHPPLGWHDTAAYLVLPVLLVVSQYASMELMKPPQTDDP 298
PT+IAARQSGSGISWL PFVDGHP LGW+DTAAYLVLPVLL+VSQY SME+MKPPQT+DP
Sbjct: 226 PTSIAARQSGSGISWLFPFVDGHPLLGWYDTAAYLVLPVLLIVSQYVSMEIMKPPQTNDP 285
Query: 299 AQKNTLLVFKFLPLMIGYFSLSVPSGLSIYWFTNNVLSTAQQVWLRKLGGAKPVVTENAS 358
QKNTLL+FKFLPLMIGYFSLSVPSGL+IYWFTNNVLSTAQQVWLRKLGGAKP V ENA
Sbjct: 286 NQKNTLLIFKFLPLMIGYFSLSVPSGLTIYWFTNNVLSTAQQVWLRKLGGAKPAVNENAG 345
Query: 359 EIITAGRAKRSVSQPSRAGDRFRQLKEEEKGKKLNKALPAEDVQTMNSASDSEGESDGE- 417
IITAG+AKRS S+P + G+RFRQLKEEEK KKL KALP E+VQ + SAS S SD E
Sbjct: 346 GIITAGQAKRSASKPEKGGERFRQLKEEEKKKKLIKALPVEEVQPLASASASNDGSDVEN 405
Query: 418 -KGQGVLEEAYASNRSKQV 435
K Q V EE+ S S++V
Sbjct: 406 NKEQEVTEESNTSKVSQEV 424
>sp|Q8LBP4|ALB3_ARATH Inner membrane protein ALBINO3, chloroplastic OS=Arabidopsis
thaliana GN=ALB3 PE=1 SV=2
Length = 462
Score = 610 bits (1574), Expect = e-174, Method: Compositional matrix adjust.
Identities = 300/398 (75%), Positives = 334/398 (83%), Gaps = 16/398 (4%)
Query: 16 LPSPSSSLSRHGL----------HRLPNRRL--ASTRVRLSFQEIPPILSLDSSIDLNSV 63
L PSSSL G+ +R N +L ST VR S EIPP LDSS+D+ ++
Sbjct: 17 LIKPSSSLRHSGVGGGGTAQFLPYRSNNNKLFTTSTTVRFSLNEIPPFHGLDSSVDIGAI 76
Query: 64 FSRTESLLYTLADAAVSLDSASGGAASTSADGATQKNGGWFGFISEAMEFVLKILKDGID 123
F+R ESLLYT+ADAAV + T+ A QK+GGWFGFIS+AME VLKILKDG+
Sbjct: 77 FTRAESLLYTIADAAV----VGADSVVTTDSSAVQKSGGWFGFISDAMELVLKILKDGLS 132
Query: 124 AVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQL 183
AVHVPY+YGFAIILLT+IVK AT+PLTK+QVESTLAMQNLQPKIKAIQQRYAGNQERIQL
Sbjct: 133 AVHVPYAYGFAIILLTIIVKAATYPLTKQQVESTLAMQNLQPKIKAIQQRYAGNQERIQL 192
Query: 184 ETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSGPTTIA 243
ETSRLY+QAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGL TEGFFWIPSL GPT+IA
Sbjct: 193 ETSRLYKQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLFTEGFFWIPSLGGPTSIA 252
Query: 244 ARQSGSGISWLLPFVDGHPPLGWHDTAAYLVLPVLLVVSQYASMELMKPPQTDDPAQKNT 303
ARQSGSGISWL PFVDGHPPLGW+DT AYLVLPVLL+ SQY SME+MKPPQTDDPAQKNT
Sbjct: 253 ARQSGSGISWLFPFVDGHPPLGWYDTVAYLVLPVLLIASQYVSMEIMKPPQTDDPAQKNT 312
Query: 304 LLVFKFLPLMIGYFSLSVPSGLSIYWFTNNVLSTAQQVWLRKLGGAKPVVTENASEIITA 363
LLVFKFLPLMIGYF+LSVPSGLSIYW TNNVLSTAQQV+LRKLGGAKP + ENAS+II+A
Sbjct: 313 LLVFKFLPLMIGYFALSVPSGLSIYWLTNNVLSTAQQVYLRKLGGAKPNMDENASKIISA 372
Query: 364 GRAKRSVSQPSRAGDRFRQLKEEEKGKKLNKALPAEDV 401
GRAKRS++QP AG+RFRQLKE+EK K NKA+ + V
Sbjct: 373 GRAKRSIAQPDDAGERFRQLKEQEKRSKKNKAVAKDTV 410
>sp|Q9FYL3|ALB31_ARATH ALBINO3-like protein 1, chloroplastic OS=Arabidopsis thaliana
GN=ALB3L1 PE=2 SV=3
Length = 499
Score = 420 bits (1080), Expect = e-116, Method: Compositional matrix adjust.
Identities = 223/380 (58%), Positives = 279/380 (73%), Gaps = 34/380 (8%)
Query: 68 ESLLYTLADAAVSLDSASGGAASTSADGATQKNGGWFGFISEAMEFVLKILKDGIDAVHV 127
E+LLYT+ADAAVS A T+ T ++ WF I+ ME +LK+LKDG+ VHV
Sbjct: 63 ENLLYTIADAAVSSSETFESVAGTTTK--TTQSNDWFSGIANYMETILKVLKDGLSTVHV 120
Query: 128 PYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSR 187
PYSYGFAIILLTV+VK ATFPLTKKQVES +AM++L P+IKAIQ+RYAG+QE+IQLET+R
Sbjct: 121 PYSYGFAIILLTVLVKAATFPLTKKQVESAMAMKSLTPQIKAIQERYAGDQEKIQLETAR 180
Query: 188 LYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSGPTTIAARQS 247
LY+ AG+NPLAGCLPTLATIPVWIGLY+ALSNVA+EGLLTEGFFWIPSL+GPTT+AARQ+
Sbjct: 181 LYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTVAARQN 240
Query: 248 GSGISWLLPFVDGHPPLGWHDTAAYLVLPVLLVVSQYASMELMKPPQTDDPAQKNTLLVF 307
GSGISWL PF++GHPPLGW DT AYLVLP+LLV SQY S+++M+ Q++DPA K++ V
Sbjct: 241 GSGISWLFPFIEGHPPLGWPDTLAYLVLPLLLVFSQYLSIQIMQSSQSNDPAMKSSQAVT 300
Query: 308 KFLPLMIGYFSLSVPSGLSIYWFTNNVLSTAQQVWLRKLGGAK----------------- 350
K LPLMIGYF+LSVPSGLS+YW TNN+LSTAQQVWL+K GGAK
Sbjct: 301 KLLPLMIGYFALSVPSGLSLYWLTNNILSTAQQVWLQKYGGAKNPVEKFTNLVTKEDKTQ 360
Query: 351 --------PVVTENASEI-ITAGRAKRSVS-QPSRAGDRFRQLKEEEKGKK-----LNKA 395
P+V ++ SE+ I + V+ + + G+RFR LKE+E ++ KA
Sbjct: 361 QIEKSFSEPLVQKSVSELKIPREKGGEKVTPECPKPGERFRLLKEQEAKRRREKEERQKA 420
Query: 396 LPAEDVQTMNSASDSEGESD 415
A Q + A + + +SD
Sbjct: 421 EAALSNQNTDKAHEQDEKSD 440
>sp|Q8LKI3|ALB32_CHLRE Inner membrane ALBINO3-like protein 2, chloroplastic
OS=Chlamydomonas reinhardtii GN=ALB3.2 PE=2 SV=1
Length = 422
Score = 333 bits (854), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 168/297 (56%), Positives = 215/297 (72%), Gaps = 21/297 (7%)
Query: 97 TQKNGGWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVES 156
T GG +++ EFVL+ L +G+++ +PYSYGFAII LTV+VKVATFPLT+KQVES
Sbjct: 67 TLAEGGPIDVLAQFFEFVLQTLDEGLESAKIPYSYGFAIIALTVLVKVATFPLTQKQVES 126
Query: 157 TLAMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQA 216
TL++Q LQP++K +Q +YA + E +QLET+RLY++AGVNPLAGC PTLATIPV+IGLY A
Sbjct: 127 TLSLQALQPRVKELQAKYADDPENLQLETARLYKEAGVNPLAGCFPTLATIPVFIGLYNA 186
Query: 217 LSNVANEGLLTEGFFWIPSLSGPTTIAARQSGSGISWLLPFVDGHPPLGWHDTAAYLVLP 276
LSN A EGLLTEGFFWIPSL GPTTI G G+ WL+PF +G PP+GW + AAYLV+P
Sbjct: 187 LSNAAKEGLLTEGFFWIPSLGGPTTI-----GGGLEWLVPFENGAPPVGWANAAAYLVMP 241
Query: 277 VLLVVSQYASMELMKPPQTDDPAQKNTLLVFKFLPLMIGYFSLSVPSGLSIYWFTNNVLS 336
VLLV SQYAS +++ DP+Q+ + KFLPLMIG+FSL+VPSGL++YWF NN+LS
Sbjct: 242 VLLVASQYASQKIISSQNNQDPSQQQAQAILKFLPLMIGWFSLNVPSGLTLYWFVNNLLS 301
Query: 337 TAQQVWLRKLGGAKPVVTENASEIITAGRAKRSVSQPSRAGDRFRQLK-EEEKGKKL 392
T QQ++L K V N E I A P+ AG +K +EE+ KK+
Sbjct: 302 TGQQLYL------KATVKVNIPEAIKA---------PATAGSSTPIVKPKEERVKKV 343
>sp|Q8S339|ALB31_CHLRE Inner membrane ALBINO3-like protein 1, chloroplastic
OS=Chlamydomonas reinhardtii GN=ALB3.1 PE=3 SV=1
Length = 495
Score = 318 bits (816), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 158/275 (57%), Positives = 212/275 (77%), Gaps = 11/275 (4%)
Query: 88 AASTSADGATQKNGGWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATF 147
A ++A A Q+ GGW +++A+E VL L++G+D +HVPYSYG++IILLT+IVK+ T+
Sbjct: 98 AVDSAAGAAPQRAGGWVAPVADALEQVLYALQEGLDKLHVPYSYGYSIILLTLIVKLLTY 157
Query: 148 PLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATI 207
PLTK+QVES +A+Q L+P+I I+ R+ ++++IQ ETS LY QAGVNPLAGCLPTLATI
Sbjct: 158 PLTKQQVESAMAVQALKPRIDLIKDRFGEDKDKIQKETSVLYEQAGVNPLAGCLPTLATI 217
Query: 208 PVWIGLYQALSNVANEGLL-TEGFFWIPSLSGPTTIAARQSGSGISWLLPF-VDGHPPLG 265
P++IGL+ +L+NVAN+GLL T+GF+++PSL+GPTT+A RQSG G SWL P DG PP+G
Sbjct: 218 PIFIGLFSSLTNVANDGLLDTQGFYFVPSLAGPTTMAMRQSGLGTSWLWPLGPDGAPPIG 277
Query: 266 WHDTAAYLVLPVLLVVSQYASMELMKPPQTDDPAQKN-----TLLVFKFLPLMIGYFSLS 320
W D AAYL LP+LLV QYAS + PP DP +N LLV FLPLM+G+FSL+
Sbjct: 278 WEDAAAYLTLPLLLVAVQYASSSVTSPPI--DPKDENANTQRALLV--FLPLMVGWFSLN 333
Query: 321 VPSGLSIYWFTNNVLSTAQQVWLRKLGGAKPVVTE 355
VP+GLS+Y+ N VLS+A Q++L+KLGGA V+ E
Sbjct: 334 VPAGLSLYYLANTVLSSAIQIYLKKLGGANVVMNE 368
>sp|A0LLH3|YIDC_SYNFM Membrane protein insertase YidC OS=Syntrophobacter fumaroxidans
(strain DSM 10017 / MPOB) GN=yidC PE=3 SV=1
Length = 553
Score = 144 bits (363), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 83/251 (33%), Positives = 136/251 (54%), Gaps = 32/251 (12%)
Query: 96 ATQKNGGWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVE 155
A+ + GWF FI++ + +VL +++G AIILLT+++K+ +PLT+K +
Sbjct: 332 ASAVDYGWFTFIAKPLVYVLDWF------YRYTHNWGVAIILLTIVIKILFWPLTQKSYQ 385
Query: 156 STLAMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQ 215
S M+ +QPK+ I+++Y G++E++ E LYR VNP+ GCLP L IPV+ LY+
Sbjct: 386 SMQKMKKIQPKMTQIREKYKGDREKMNQELMGLYRTYKVNPMGGCLPMLLQIPVFFALYR 445
Query: 216 ALSNVANEGLLTEGF-FWIPSLSGPTTIAARQSGSGISWLLPFVDGHPPLGWHDTAAYLV 274
L+ L E F WI L+ P + I + +P++ G P V
Sbjct: 446 MLNGAVE--LRHEPFMLWIDDLTAPDRLP-------IGFDIPYLGGLP-----------V 485
Query: 275 LPVLLVVSQYASMELMKPPQTDDPAQKNTLLVFKFLPLMIGYFSLSVPSGLSIYWFTNNV 334
L +L+ ++ + ++ P DP Q +++ +P+M F ++ PSGL +YW NNV
Sbjct: 486 LTLLMGITMFIQQKMT--PSAGDPRQDQIMMI---MPVMFTVFFVNFPSGLVLYWLVNNV 540
Query: 335 LSTAQQVWLRK 345
LS AQQ W+ +
Sbjct: 541 LSIAQQYWVNR 551
>sp|B3QYV6|YIDC_CHLT3 Membrane protein insertase YidC OS=Chloroherpeton thalassium
(strain ATCC 35110 / GB-78) GN=yidC PE=3 SV=1
Length = 586
Score = 137 bits (344), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 83/246 (33%), Positives = 133/246 (54%), Gaps = 28/246 (11%)
Query: 114 VLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQR 173
+ L + +D SYG IIL + +K+ T+PLT +S M LQP++KAIQ++
Sbjct: 359 IFNFLNNHVD------SYGVIIILFALFIKLVTYPLTMASTKSMKKMAALQPQLKAIQEQ 412
Query: 174 YAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWI 233
Y N E++Q E S +YR+AGVNPL GCLPT+ +P+ ++ + L EGF W
Sbjct: 413 YKDNPEKLQAEISGIYREAGVNPLGGCLPTVIQMPLLFAMFYVFRSSIQ--LRQEGFLWS 470
Query: 234 PSLSGPTTIAARQSGSGISWLLPFVDGHPPLGWHDTAAYLVLPVLLVVSQYASMELMKPP 293
LS P +I LPF P G H + V+P+L+ V+ + +L
Sbjct: 471 NDLSVPDSILD----------LPF--SIPLYGDHVS----VIPILMGVAVFFQQKLTPST 514
Query: 294 QTDDPAQKNTLLVFKFLPLMIGYFSLSVPSGLSIYWFTNNVLSTAQQVWLRKLGGAKPVV 353
QT+D + +++ F +M+ +F+ ++PSGL +Y+ NV S AQQ ++ + +PVV
Sbjct: 515 QTNDQMK---FMMYLFPGMMLIFFN-NMPSGLGLYYLMFNVFSIAQQFYINQTTETEPVV 570
Query: 354 TENASE 359
++ S+
Sbjct: 571 LKDKSK 576
>sp|B2IDV5|YIDC_BEII9 Membrane protein insertase YidC OS=Beijerinckia indica subsp.
indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) GN=yidC
PE=3 SV=1
Length = 604
Score = 132 bits (333), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 89/257 (34%), Positives = 136/257 (52%), Gaps = 21/257 (8%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
G+F FI+ M ++L + V ++G AI+ +TV+VK FPL + S M+
Sbjct: 356 GYFYFITRPMFWILHTI------YQVVGNFGVAILCITVLVKAVFFPLANRSYLSMAKMK 409
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
+QP++ A+++RYA ++ + Q E LY++ +NP+AGCLP L IPV+ LY+ L V
Sbjct: 410 AIQPQMLALRERYADDKVKQQQELMELYKREKINPVAGCLPMLIQIPVFFALYKVLF-VT 468
Query: 222 NEGLLTEGFFWIPSLSG--PTTIAARQSGSGISWLLPFVDGHPPLGWHDTAAYLVLPVLL 279
E F WI LS PT I + LLPF H P+ H A + P+++
Sbjct: 469 IEMRQAPFFGWIRDLSAPDPTNIF------NLFGLLPFDPTHLPMIGH-FLAIGIWPLIM 521
Query: 280 VVSQYASMELMKPPQTDDPAQKNTLLVFKFLPLMIGYFSLSVPSGLSIYWFTNNVLSTAQ 339
VS + M++ P+ DP QK +F ++P++ + + PSGL IYW NN LS Q
Sbjct: 522 GVSMFFQMKMN--PEPADPVQKQ---MFSWMPVIFTFMLGTFPSGLVIYWTWNNTLSVLQ 576
Query: 340 QVWLRKLGGAKPVVTEN 356
Q + K G K + +N
Sbjct: 577 QSLIMKRAGVKVELWDN 593
>sp|O66103|YIDC_TREPA Membrane protein insertase YidC OS=Treponema pallidum (strain
Nichols) GN=yidC PE=3 SV=2
Length = 622
Score = 132 bits (333), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 78/217 (35%), Positives = 119/217 (54%), Gaps = 18/217 (8%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
++G AIIL+T+ +KV FPLTK+ + MQ LQP ++ IQ+RY GN ++I E ++LY
Sbjct: 416 NWGVAIILVTIAIKVLFFPLTKRSFIAMQKMQELQPHMQRIQERYKGNTQKIHEEMAKLY 475
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLSGPTTIAARQSGS 249
R+A NPL+GCLPTL +P+ +Y+ +N +WIP LS ++
Sbjct: 476 REAQYNPLSGCLPTLVQMPIIFAMYRLFNNYFEFRGAMFIPYWIPDLSLADSV------- 528
Query: 250 GISWLLPFVDGHPPLGWHDTAAYLVLPVLLVVSQYASMELMKPPQTDDPAQKNTLLVFKF 309
W LPF P W +LPVL VVSQ +L + P T+ QK ++ + +
Sbjct: 529 ---WTLPF--ALPVTQWTQMR---MLPVLYVVSQIMFSKLTQVPHTEQ--QKTSMTIMTY 578
Query: 310 -LPLMIGYFSLSVPSGLSIYWFTNNVLSTAQQVWLRK 345
+PL +F PSGL +YW N ++ QQ+ +++
Sbjct: 579 VMPLFFFFFFYDAPSGLLVYWTAMNGVTLVQQLVMKR 615
>sp|C3LP77|YIDC_VIBCM Membrane protein insertase YidC OS=Vibrio cholerae serotype O1
(strain M66-2) GN=yidC PE=3 SV=1
Length = 541
Score = 132 bits (332), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 79/248 (31%), Positives = 127/248 (51%), Gaps = 49/248 (19%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GW FI++ + ++L +++ + ++G AII LT IV+ A +PLTK Q S M+
Sbjct: 329 GWLWFIAKPLHWLLSVIQTFVG------NWGVAIICLTFIVRGAMYPLTKAQYTSMAKMR 382
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
LQPK++A+++R +++R+ E LY++ VNPL GCLP L +P++I LY AL
Sbjct: 383 MLQPKLQAMRERIGDDRQRMSQEMMELYKKEKVNPLGGCLPILLQMPIFIALYWALME-- 440
Query: 222 NEGLLTEGFFWIPSLSGPTTIAARQSGSGISWLLPFVDGHPPLGW-HDTAA---YLVLPV 277
++ R S P GW HD +A Y +LP+
Sbjct: 441 -------------------SVELRHS--------------PFFGWIHDLSAQDPYYILPL 467
Query: 278 LLVVSQYASMELMKPPQTDDPAQKNTLLVFKFLPLMIGYFSLSVPSGLSIYWFTNNVLST 337
L+ S + ++ M P DP Q+ + F+P+M +F L PSGL +YW +N+++
Sbjct: 468 LMGASMFV-IQKMSPTTITDPMQQK---IMTFMPVMFTFFFLWFPSGLVLYWLVSNIVTL 523
Query: 338 AQQVWLRK 345
QQ + K
Sbjct: 524 IQQTLIYK 531
>sp|Q9KVY4|YIDC_VIBCH Membrane protein insertase YidC OS=Vibrio cholerae serotype O1
(strain ATCC 39315 / El Tor Inaba N16961) GN=yidC PE=3
SV=1
Length = 541
Score = 132 bits (332), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 79/248 (31%), Positives = 127/248 (51%), Gaps = 49/248 (19%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GW FI++ + ++L +++ + ++G AII LT IV+ A +PLTK Q S M+
Sbjct: 329 GWLWFIAKPLHWLLSVIQTFVG------NWGVAIICLTFIVRGAMYPLTKAQYTSMAKMR 382
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
LQPK++A+++R +++R+ E LY++ VNPL GCLP L +P++I LY AL
Sbjct: 383 MLQPKLQAMRERIGDDRQRMSQEMMELYKKEKVNPLGGCLPILLQMPIFIALYWALME-- 440
Query: 222 NEGLLTEGFFWIPSLSGPTTIAARQSGSGISWLLPFVDGHPPLGW-HDTAA---YLVLPV 277
++ R S P GW HD +A Y +LP+
Sbjct: 441 -------------------SVELRHS--------------PFFGWIHDLSAQDPYYILPL 467
Query: 278 LLVVSQYASMELMKPPQTDDPAQKNTLLVFKFLPLMIGYFSLSVPSGLSIYWFTNNVLST 337
L+ S + ++ M P DP Q+ + F+P+M +F L PSGL +YW +N+++
Sbjct: 468 LMGASMFV-IQKMSPTTITDPMQQK---IMTFMPVMFTFFFLWFPSGLVLYWLVSNIVTL 523
Query: 338 AQQVWLRK 345
QQ + K
Sbjct: 524 IQQTLIYK 531
>sp|A5F484|YIDC_VIBC3 Membrane protein insertase YidC OS=Vibrio cholerae serotype O1
(strain ATCC 39541 / Ogawa 395 / O395) GN=yidC PE=3 SV=1
Length = 541
Score = 132 bits (332), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 79/248 (31%), Positives = 127/248 (51%), Gaps = 49/248 (19%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GW FI++ + ++L +++ + ++G AII LT IV+ A +PLTK Q S M+
Sbjct: 329 GWLWFIAKPLHWLLSVIQTFVG------NWGVAIICLTFIVRGAMYPLTKAQYTSMAKMR 382
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
LQPK++A+++R +++R+ E LY++ VNPL GCLP L +P++I LY AL
Sbjct: 383 MLQPKLQAMRERIGDDRQRMSQEMMELYKKEKVNPLGGCLPILLQMPIFIALYWALME-- 440
Query: 222 NEGLLTEGFFWIPSLSGPTTIAARQSGSGISWLLPFVDGHPPLGW-HDTAA---YLVLPV 277
++ R S P GW HD +A Y +LP+
Sbjct: 441 -------------------SVELRHS--------------PFFGWIHDLSAQDPYYILPL 467
Query: 278 LLVVSQYASMELMKPPQTDDPAQKNTLLVFKFLPLMIGYFSLSVPSGLSIYWFTNNVLST 337
L+ S + ++ M P DP Q+ + F+P+M +F L PSGL +YW +N+++
Sbjct: 468 LMGASMFV-IQKMSPTTITDPMQQK---IMTFMPVMFTFFFLWFPSGLVLYWLVSNIVTL 523
Query: 338 AQQVWLRK 345
QQ + K
Sbjct: 524 IQQTLIYK 531
>sp|Q1QH68|YIDC_NITHX Membrane protein insertase YidC OS=Nitrobacter hamburgensis (strain
X14 / DSM 10229) GN=yidC PE=3 SV=1
Length = 609
Score = 131 bits (330), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 83/277 (29%), Positives = 140/277 (50%), Gaps = 27/277 (9%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GWF FI++ M L HV ++G AI+ +TV++K FPL + S M+
Sbjct: 356 GWFYFITKPMFLALDFF------FHVFGNFGIAILFVTVLIKAIFFPLANRSYASMAKMK 409
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
+QP+I A+++R+ ++ ++Q E +Y++ +NP++GCLP + IPV+ LY+ L V
Sbjct: 410 AVQPQIAALKERFPDDKMKLQQEMMEIYKKEKINPISGCLPMVLQIPVFFSLYKVLF-VT 468
Query: 222 NEGLLTEGFFWIPSLSGPTTIAARQSGSGISWLLPFVDGHPPLGWHDTAAYLVL---PVL 278
E F WI LS P + LLP+ PL YL + P++
Sbjct: 469 IEMRHAPFFAWIKDLSAPDPTHIFN----LFGLLPYDPSAVPL----LGPYLAIGAWPII 520
Query: 279 LVVSQYASMELMKPPQTDDPAQKNTLLVFKFLPLMIGYFSLSVPSGLSIYWFTNNVLSTA 338
+ ++ + M+L P DP QK L+F ++P++ + + P+GL IYW NN LS
Sbjct: 521 MGITMWFQMKLN--PTPPDPTQK---LIFDWMPVIFTFMLAAFPAGLVIYWAWNNTLSVI 575
Query: 339 QQVWLRKLGGAKPVVTENASEIITAGRAKRSVSQPSR 375
QQ ++ + G K + N + ++S +P++
Sbjct: 576 QQSYIMRRNGVKVELLNNVKSVFR----RKSSDKPAK 608
>sp|A1AV44|YIDC_PELPD Membrane protein insertase YidC OS=Pelobacter propionicus (strain
DSM 2379) GN=yidC PE=3 SV=1
Length = 542
Score = 131 bits (329), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 85/245 (34%), Positives = 128/245 (52%), Gaps = 31/245 (12%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GWF I++ + + LK + +YG AII++T+I+K FPLT K +S MQ
Sbjct: 326 GWFTVIAKPLLYTLKYFYRYVG------NYGVAIIIITIILKALFFPLTHKSYKSMKDMQ 379
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
+QP + A++++Y ++E + LYR VNPL GCLP L IPV+ LY+AL +
Sbjct: 380 KIQPMMAALKEKYKDDREGMNKAVMELYRDHKVNPLGGCLPMLVQIPVFFALYKALM-FS 438
Query: 222 NEGLLTEGFFWIPSLSGPTTIAARQSGSGISWLLPFVDGHPPLGWHDTAAYLVLPVLLVV 281
E +FWI LSGP + + G LPFV G LP+L+
Sbjct: 439 IELRHAPFYFWITDLSGPDNLFGQMLG------LPFVIGP-------------LPLLMGA 479
Query: 282 SQYASMELMKPPQTDDPAQKNTLLVFKFLPLMIGYFSLSVPSGLSIYWFTNNVLSTAQQV 341
+ + ++ P T DP Q +L LP++ + L+ PSGL +YW NN+L+ QQ+
Sbjct: 480 TMFIQQKMT--PSTMDPMQAKMMLA---LPVVFTFMFLNFPSGLVLYWLLNNILTIGQQM 534
Query: 342 WLRKL 346
++ KL
Sbjct: 535 YINKL 539
>sp|A1QZM8|YIDC_BORT9 Membrane protein insertase YidC OS=Borrelia turicatae (strain
91E135) GN=yidC PE=3 SV=1
Length = 545
Score = 128 bits (322), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 75/239 (31%), Positives = 122/239 (51%), Gaps = 24/239 (10%)
Query: 106 FISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQP 165
FI M+ +++I D I P ++G +II LT++V++ FPLT K +T + LQP
Sbjct: 322 FIQVPMQLIMQIFYDVI-----P-NWGLSIIFLTIVVRILIFPLTFKSFRATAELSKLQP 375
Query: 166 KIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGL 225
K+K IQ ++ + +R+ E +LYR+ GVNPL GCLP L +PV+ LY ++N
Sbjct: 376 KMKEIQVKFKNDPKRLNEEMGKLYREEGVNPLGGCLPILLQLPVFFALYGLVNNF----F 431
Query: 226 LTEGFFWIPSLSGPTTIAARQSGSGISWLLPFVDGHPPLGWHDTAAYLVLPVLLVVSQYA 285
L G +IP +I G I + G+ W D +LP +++++Q
Sbjct: 432 LLRGASFIPGWIDDLSI-----GDSIYYF-----GYKVFVWTDIR---ILPFIMMITQLL 478
Query: 286 SMELMKPPQTDDPAQKNTLLVFKFLPLMIGYFSLSVPSGLSIYWFTNNVLSTAQQVWLR 344
S + + + L F +P+M + +PSGL IYW T N+ + QQ +++
Sbjct: 479 STIISSNVSFKNLGSQQKFLYFG-MPIMFFFILYDMPSGLLIYWITTNIFTILQQYYIK 536
>sp|B8EPG5|YIDC_METSB Membrane protein insertase YidC OS=Methylocella silvestris (strain
BL2 / DSM 15510 / NCIMB 13906) GN=yidC PE=3 SV=1
Length = 600
Score = 128 bits (322), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 90/260 (34%), Positives = 133/260 (51%), Gaps = 17/260 (6%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GWF FI+ M +L L + ++G AI+L TVIVK FPL K S M+
Sbjct: 352 GWFYFITRPMFRLLHFLYS------LTGNFGVAILLATVIVKGLFFPLANKSYLSMAKMK 405
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
+ P+I A++++Y ++ + Q ET LY++ +NP++GCLP L IPV+ LY+ L V
Sbjct: 406 AVAPEIAALREKYPEDKMKQQQETMALYKREKINPVSGCLPMLIQIPVFFALYKVLF-VT 464
Query: 222 NEGLLTEGFFWIPSLSGPTTIAARQSGSGISWLLPFVDGHPPLGWHDTAAYLVLPVLLVV 281
E F WI LS P + + LLPF PL H A V P+L+ V
Sbjct: 465 IEMRHAPFFGWIHDLSAPDP----TNLFNLFGLLPFDPTQLPLIGH-FLAIGVWPLLMGV 519
Query: 282 SQYASMELMKPPQTDDPAQKNTLLVFKFLPLMIGYFSLSVPSGLSIYWFTNNVLSTAQQV 341
S + M+ P+ DP QK +F ++P++ + P GL IYW NN+LS +QQ
Sbjct: 520 SMFVQMK--ANPEPADPMQKQ---IFTWMPVIFTFTLGGFPVGLVIYWTWNNILSVSQQT 574
Query: 342 WLRKLGGAKPVVTENASEII 361
+ K G K + +N + +
Sbjct: 575 LIMKRAGVKVELFDNLASLF 594
>sp|Q9RNL5|YIDC_ZYMMO Membrane protein insertase YidC OS=Zymomonas mobilis subsp. mobilis
(strain ATCC 31821 / ZM4 / CP4) GN=yidC PE=3 SV=2
Length = 579
Score = 126 bits (317), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 80/249 (32%), Positives = 128/249 (51%), Gaps = 29/249 (11%)
Query: 100 NGGWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLA 159
+ GWF I + + L L +HV +YG AIIL+ ++ FP+ KQ S +
Sbjct: 335 DWGWFAIIEKVFFYYLDWL-----FLHVG-NYGLAIILMVFTIRALIFPIANKQYASMAS 388
Query: 160 MQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSN 219
M+ LQPK++A+++RY ++ R++ E LY++ VNP AGCLP P++I LY+ L
Sbjct: 389 MRRLQPKMQAVRERYKNDEARMRQELVTLYQKEKVNPFAGCLPMFIQFPIFIALYKTLL- 447
Query: 220 VANEGLLTEGFFWIPSLSGPTTIAARQSGSGISWLLPFVDGHPPLGWHDTAAYL---VLP 276
V E WI LS P + + + LL F H +L VLP
Sbjct: 448 VTIESRHQPFILWIKDLSAPDPL----TPFNLFGLLHFTPPH----------FLMIGVLP 493
Query: 277 VLLVVSQYASMELMKPPQTDDPAQKNTLLVFKFLPLMIGYFSLSVPSGLSIYWFTNNVLS 336
++L ++ + ++ PQ +PAQ+ + FLPL+ F + +GL +Y+ NN++S
Sbjct: 494 IILGITMW--LQFRASPQQLEPAQQQ---IMSFLPLISVIFMAPLAAGLQVYYIFNNLIS 548
Query: 337 TAQQVWLRK 345
AQ +WL+
Sbjct: 549 LAQMMWLQH 557
>sp|A8F0F4|YIDC_RICM5 Membrane protein insertase YidC OS=Rickettsia massiliae (strain
Mtu5) GN=yidC PE=3 SV=1
Length = 560
Score = 126 bits (316), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 83/251 (33%), Positives = 130/251 (51%), Gaps = 33/251 (13%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GWF I++ + + + + ++G +I+++TVI+K+ F L K S M+
Sbjct: 338 GWFYIITKPVFYAMNFFYGYVG------NFGVSILIVTVIIKLLMFTLANKSYRSMKKMK 391
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
NLQP+I I+ Y+ ++ R+ E LY++ VNP+AGCLP L IPV+ +Y+ L V
Sbjct: 392 NLQPEIDRIKNLYSDDKARLNQEIMALYKKEKVNPVAGCLPILVQIPVFFSIYKVLY-VT 450
Query: 222 NEGLLTEGFFWIPSLSG--PTTIAARQSGSGISWLLPFVDGHPPLGWHDTAAYLVL---P 276
E T + WI LS PTTI + LLPF PP ++L++ P
Sbjct: 451 IEMRQTPFYGWIKDLSAPDPTTIF------NLFGLLPF---SPP-------SFLMIGAWP 494
Query: 277 VLLVVSQYASMELMKPPQTDDPAQKNTLLVFKFLPLMIGYFSLSVPSGLSIYWFTNNVLS 336
+L+ ++ + ++ P+ DP Q V KF+PL+ + S P GL IYW NN+LS
Sbjct: 495 ILMAITMFLQQKM--SPEPADPMQAQ---VMKFMPLIFLFMFSSFPVGLLIYWSWNNILS 549
Query: 337 TAQQVWLRKLG 347
QQ ++ K
Sbjct: 550 IIQQYYINKFN 560
>sp|Q89BQ0|YIDC_BRAJA Membrane protein insertase YidC OS=Bradyrhizobium japonicum (strain
USDA 110) GN=yidC PE=3 SV=1
Length = 616
Score = 126 bits (316), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 83/259 (32%), Positives = 137/259 (52%), Gaps = 25/259 (9%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPY-SYGFAIILLTVIVKVATFPLTKKQVESTLAM 160
GWF FI++ M G+D + + ++G +I+L+TVIVK+ FPL K S M
Sbjct: 369 GWFYFITKPMFL-------GLDFFYRFFGNFGISILLVTVIVKLLFFPLANKSYASMAKM 421
Query: 161 QNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNV 220
+++QP+++A+++RY ++ + Q E +YR+ +NP+AGCLP + IPV+ LY+ L V
Sbjct: 422 KSIQPQLQALKERYPDDKVKQQQEMMEIYRKEKINPVAGCLPVVIQIPVFFSLYKVLF-V 480
Query: 221 ANEGLLTEGFFWIPSLSGPTTIAARQSGSGISWLLPFVDGHPPLGWHDTAAYLVL---PV 277
E + WI LS P + L+P P+ H YL L P+
Sbjct: 481 TIEMRQAPFYGWIKDLSAPDPTNLFN----LFGLIPLDPTTIPVFGH----YLALGIWPI 532
Query: 278 LLVVSQYASMELMKPPQTDDPAQKNTLLVFKFLPLMIGYFSLSVPSGLSIYWFTNNVLST 337
++ ++ + M+L P DP Q+ ++F ++PL+ + P+GL IYW NN LS
Sbjct: 533 IMGITMWFQMKLN--PTPPDPTQQ---MIFNWMPLIFTFMLAGFPAGLVIYWAWNNTLSV 587
Query: 338 AQQVWLRKLGGAKPVVTEN 356
QQ ++ + G K + +N
Sbjct: 588 LQQSFIMRRNGVKVELFDN 606
>sp|Q9ZE97|YIDC_RICPR Membrane protein insertase YidC OS=Rickettsia prowazekii (strain
Madrid E) GN=yidC PE=3 SV=1
Length = 560
Score = 126 bits (316), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 83/251 (33%), Positives = 128/251 (50%), Gaps = 33/251 (13%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GWF I++ + + + + ++G +I+++TVI+K+ F L K S M+
Sbjct: 338 GWFYIITKPVFYAMNFFYGYVG------NFGISILIVTVIIKLLMFTLANKSYRSMKKMK 391
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
NLQP+I I+ Y ++ R+ E LY++ VNP+AGCLP L IPV+ +Y+ L V
Sbjct: 392 NLQPEIDRIKNLYNNDKARLNQEIMALYKKEKVNPVAGCLPILVQIPVFFSIYKVLY-VT 450
Query: 222 NEGLLTEGFFWIPSLSG--PTTIAARQSGSGISWLLPFVDGHPPLGWHDTAAYLVL---P 276
E F WI LS PTTI + LLPF PP ++L++ P
Sbjct: 451 IEMRQAPFFGWIKDLSSPDPTTIF------NLFGLLPFA---PP-------SFLMIGAWP 494
Query: 277 VLLVVSQYASMELMKPPQTDDPAQKNTLLVFKFLPLMIGYFSLSVPSGLSIYWFTNNVLS 336
+L+ ++ + ++ P+ DP Q V KF+PL+ + S P GL IYW NN+LS
Sbjct: 495 ILMAITMFLHQKM--SPELADPIQAQ---VMKFMPLIFLFMFSSFPVGLLIYWSWNNILS 549
Query: 337 TAQQVWLRKLG 347
QQ ++ K
Sbjct: 550 IIQQYYINKFN 560
>sp|C3PM83|YIDC_RICAE Membrane protein insertase YidC OS=Rickettsia africae (strain
ESF-5) GN=yidC PE=3 SV=1
Length = 560
Score = 125 bits (314), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 83/251 (33%), Positives = 129/251 (51%), Gaps = 33/251 (13%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GWF I++ + + + + ++G +I+++TVI+K+ F L K S M+
Sbjct: 338 GWFYIITKPVFYAMNFFYGYVG------NFGVSILIVTVIIKLLMFTLANKSYRSMKKMK 391
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
NLQP+I I+ Y+ ++ R+ E LY++ VNP+AGCLP L IPV+ +Y+ L V
Sbjct: 392 NLQPEIDRIKNLYSDDKARLNQEIMALYKKEKVNPVAGCLPILVQIPVFFSIYKVLY-VT 450
Query: 222 NEGLLTEGFFWIPSLSG--PTTIAARQSGSGISWLLPFVDGHPPLGWHDTAAYLVL---P 276
E + WI LS PTTI + LLPF PPL +L++ P
Sbjct: 451 IEMRQAPFYGWIKDLSASDPTTIF------NLFGLLPF---SPPL-------FLMIGAWP 494
Query: 277 VLLVVSQYASMELMKPPQTDDPAQKNTLLVFKFLPLMIGYFSLSVPSGLSIYWFTNNVLS 336
+L+ ++ + ++ P+ DP Q V KF+PL+ + S P GL IYW NN+LS
Sbjct: 495 ILMAITMFLQQKM--SPEPADPMQAQ---VMKFMPLIFLFMFSSFPVGLLIYWSWNNILS 549
Query: 337 TAQQVWLRKLG 347
QQ ++ K
Sbjct: 550 IIQQYYINKFN 560
>sp|Q68XS4|YIDC_RICTY Membrane protein insertase YidC OS=Rickettsia typhi (strain ATCC
VR-144 / Wilmington) GN=yidC PE=3 SV=1
Length = 558
Score = 125 bits (313), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 82/251 (32%), Positives = 129/251 (51%), Gaps = 33/251 (13%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GWF I++ + + + + ++G +I+++TVI+K+ F L K S M+
Sbjct: 336 GWFYIITKPVFYAMNFFYGYVG------NFGVSILIVTVIIKLLMFTLANKSYRSMKKMK 389
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
NLQP+I I+ Y ++ R+ E LY+++ VNP+AGCLP L IPV+ +Y+ L V
Sbjct: 390 NLQPEIDRIKNLYNNDKARLNQEIMALYKKSKVNPVAGCLPILVQIPVFFSIYKVLY-VT 448
Query: 222 NEGLLTEGFFWIPSLSG--PTTIAARQSGSGISWLLPFVDGHPPLGWHDTAAYLVL---P 276
E + WI LS PTTI + LLPF PP ++L++ P
Sbjct: 449 IEMRHAPFYGWIKDLSSPDPTTIF------NLFGLLPFA---PP-------SFLMIGAWP 492
Query: 277 VLLVVSQYASMELMKPPQTDDPAQKNTLLVFKFLPLMIGYFSLSVPSGLSIYWFTNNVLS 336
+L+ ++ + ++ P+ DP Q V KF+PL+ + S P GL IYW NN+LS
Sbjct: 493 ILMAITMFLHQKM--SPELADPIQAQ---VMKFMPLIFLFMFSSFPVGLLIYWSWNNILS 547
Query: 337 TAQQVWLRKLG 347
QQ ++ K
Sbjct: 548 IIQQYYINKFN 558
>sp|P44973|YIDC_HAEIN Membrane protein insertase YidC OS=Haemophilus influenzae (strain
ATCC 51907 / DSM 11121 / KW20 / Rd) GN=yidC PE=3 SV=1
Length = 541
Score = 124 bits (312), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 76/240 (31%), Positives = 123/240 (51%), Gaps = 43/240 (17%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GW FI++ + ++L ++ GI + ++G AII +T++VK +PLTK Q S M+
Sbjct: 327 GWAWFIAKPLFWLLTFIQ-GIVS-----NWGLAIICVTIVVKAILYPLTKAQYTSMAKMR 380
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
LQPK++ +++R+ +++R+ E +LY++ VNPL GCLP L +P++I LY
Sbjct: 381 ILQPKMQEMRERFGDDRQRMSQEMMKLYKEEKVNPLGGCLPILLQMPIFIALYWTFLEAV 440
Query: 222 NEGLLTEGFF-WIPSLSGPTTIAARQSGSGISWLLPFVDGHPPLGWHDTAAYLVLPVLLV 280
L FF WI LS Y +LP+L+
Sbjct: 441 E--LRHAPFFGWIQDLSAQD------------------------------PYYILPILMG 468
Query: 281 VSQYASMELMKPPQTDDPAQKNTLLVFKFLPLMIGYFSLSVPSGLSIYWFTNNVLSTAQQ 340
+S + ++ M P DP Q+ V F+PL+ +F L PSGL +YW +N+++ AQQ
Sbjct: 469 ISMFL-LQKMSPTPVTDPTQQK---VMNFMPLVFMFFFLWFPSGLVLYWLVSNLITIAQQ 524
>sp|Q92JJ3|YIDC_RICCN Membrane protein insertase YidC OS=Rickettsia conorii (strain ATCC
VR-613 / Malish 7) GN=yidC PE=3 SV=1
Length = 560
Score = 124 bits (312), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 82/251 (32%), Positives = 129/251 (51%), Gaps = 33/251 (13%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GWF I++ + + + + ++G +I+++TVI+K+ F L K S M+
Sbjct: 338 GWFYIITKPVFYAMNFFYGYVG------NFGVSILIVTVIIKLLMFTLANKSYRSMKKMK 391
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
NLQP+I I+ Y+ ++ R+ E LY++ VNP+AGCLP L IPV+ +Y+ L V
Sbjct: 392 NLQPEIDRIKNLYSDDKARLNQEIMALYKKEKVNPVAGCLPILVQIPVFFSIYKVLY-VT 450
Query: 222 NEGLLTEGFFWIPSLSG--PTTIAARQSGSGISWLLPFVDGHPPLGWHDTAAYLVL---P 276
E + WI LS PTTI + LLPF PP ++L++ P
Sbjct: 451 IEMRQAPFYGWIKDLSASDPTTIF------NLFGLLPF---SPP-------SFLMIGAWP 494
Query: 277 VLLVVSQYASMELMKPPQTDDPAQKNTLLVFKFLPLMIGYFSLSVPSGLSIYWFTNNVLS 336
+L+ ++ + ++ P+ DP Q V KF+PL+ + S P GL IYW NN+LS
Sbjct: 495 ILMAITMFLQQKM--SPEPADPMQAQ---VMKFMPLIFLFMFSSFPVGLLIYWSWNNILS 549
Query: 337 TAQQVWLRKLG 347
QQ ++ K
Sbjct: 550 IIQQYYINKFN 560
>sp|C3MF49|YIDC_RHISN Membrane protein insertase YidC OS=Rhizobium sp. (strain NGR234)
GN=yidC PE=3 SV=1
Length = 592
Score = 124 bits (312), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 84/270 (31%), Positives = 135/270 (50%), Gaps = 41/270 (15%)
Query: 102 GWFGFISE----AMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVEST 157
GWF FI++ M+F ++ + +G AI++ T++VK+ FPL KQ S
Sbjct: 348 GWFWFITQPMFKMMDFFFRLFGN----------FGVAILVTTIVVKLIFFPLANKQYASM 397
Query: 158 LAMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQAL 217
M+ +QPK++ +++++ ++ +Q +LY+ +NPLAGC P L IPV+ LY+ +
Sbjct: 398 ANMKKVQPKMEELKKKFGDDRMGLQQAMMQLYKDEKINPLAGCWPILIQIPVFFALYKVI 457
Query: 218 SNVANEGLLTEGFFWIPSLSG--PTTIAARQSGSGISWLLPFVDGHPPLGWHDTAAYL-- 273
+ E F WI LS PTTI + LLPF D A+L
Sbjct: 458 Y-ITIEMRHAPFFGWIRDLSAPDPTTIV------NLFGLLPF----------DGPAFLHL 500
Query: 274 -VLPVLLVVSQYASMELMKPPQTDDPAQKNTLLVFKFLPLMIGYFSLSVPSGLSIYWFTN 332
+ P+++ V+ + M + P DP Q ++F ++PL+ + S P+GL IYW N
Sbjct: 501 GIWPIIMGVTMFLQMRMN--PTPPDPTQA---MLFTWMPLVFTFMLASFPAGLVIYWAWN 555
Query: 333 NVLSTAQQVWLRKLGGAKPVVTENASEIIT 362
N LS QQ + K G K + +N + T
Sbjct: 556 NTLSITQQSIIMKRQGVKIELFDNLKGLFT 585
>sp|Q4QLR0|YIDC_HAEI8 Membrane protein insertase YidC OS=Haemophilus influenzae (strain
86-028NP) GN=yidC PE=3 SV=1
Length = 541
Score = 124 bits (312), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 76/240 (31%), Positives = 123/240 (51%), Gaps = 43/240 (17%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GW FI++ + ++L ++ GI + ++G AII +T++VK +PLTK Q S M+
Sbjct: 327 GWAWFIAKPLFWLLTFIQ-GIVS-----NWGLAIICVTIVVKAILYPLTKAQYTSMAKMR 380
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
LQPK++ +++R+ +++R+ E +LY++ VNPL GCLP L +P++I LY
Sbjct: 381 ILQPKMQEMRERFGDDRQRMSQEMMKLYKEEKVNPLGGCLPILLQMPIFIALYWTFLEAV 440
Query: 222 NEGLLTEGFF-WIPSLSGPTTIAARQSGSGISWLLPFVDGHPPLGWHDTAAYLVLPVLLV 280
L FF WI LS Y +LP+L+
Sbjct: 441 E--LRHAPFFGWIQDLSAQD------------------------------PYYILPILMG 468
Query: 281 VSQYASMELMKPPQTDDPAQKNTLLVFKFLPLMIGYFSLSVPSGLSIYWFTNNVLSTAQQ 340
+S + ++ M P DP Q+ V F+PL+ +F L PSGL +YW +N+++ AQQ
Sbjct: 469 ISMFL-LQKMSPTPVTDPTQQK---VMNFMPLVFMFFFLWFPSGLVLYWLVSNLITIAQQ 524
>sp|C4K168|YIDC_RICPU Membrane protein insertase YidC OS=Rickettsia peacockii (strain
Rustic) GN=yidC PE=3 SV=1
Length = 560
Score = 124 bits (311), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 82/251 (32%), Positives = 129/251 (51%), Gaps = 33/251 (13%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GWF I++ + + + + ++G +I+++TVI+K+ F L K S M+
Sbjct: 338 GWFYIITKPVFYAMNFFYGYVG------NFGVSILIVTVIIKLLMFTLANKSYRSMKKMK 391
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
NLQP+I I+ Y+ ++ R+ E LY++ VNP+AGCLP L IPV+ +Y+ L V
Sbjct: 392 NLQPEIDRIKNLYSDDKARLNQEIMALYKKEKVNPVAGCLPILVQIPVFFSIYKVLY-VT 450
Query: 222 NEGLLTEGFFWIPSLSG--PTTIAARQSGSGISWLLPFVDGHPPLGWHDTAAYLVL---P 276
E + WI LS PTTI + LLPF PP ++L++ P
Sbjct: 451 IEMRQAPFYGWIKDLSAPDPTTIF------NLFGLLPF---SPP-------SFLMIGAWP 494
Query: 277 VLLVVSQYASMELMKPPQTDDPAQKNTLLVFKFLPLMIGYFSLSVPSGLSIYWFTNNVLS 336
+L+ ++ + ++ P+ DP Q V KF+PL+ + S P GL IYW NN+LS
Sbjct: 495 ILMAITMFLQQKM--SPEPADPMQAQ---VMKFMPLIFLFMFSSFPVGLLIYWSWNNILS 549
Query: 337 TAQQVWLRKLG 347
QQ ++ K
Sbjct: 550 IIQQYYINKFN 560
>sp|Q30YQ5|YIDC_DESDG Membrane protein insertase YidC OS=Desulfovibrio desulfuricans
(strain G20) GN=yidC PE=3 SV=1
Length = 536
Score = 124 bits (311), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 80/247 (32%), Positives = 121/247 (48%), Gaps = 35/247 (14%)
Query: 100 NGGWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLA 159
N GWF F+++ + LK +YG AII+LT++VK+ +PL++K +S
Sbjct: 323 NYGWFTFLAKPLVSGLKFFYSYAG------NYGVAIIILTILVKLLFWPLSQKSYKSMEQ 376
Query: 160 MQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSN 219
M+ LQP ++ I+++Y +++R+ E LY+ VNP GCLP L IPV++GLYQ L N
Sbjct: 377 MKKLQPMVQKIKEKYGDDRQRMNQEVMELYKTYKVNPAGGCLPMLLQIPVFLGLYQGLLN 436
Query: 220 VANEGLLTEGFFWIPSLSGPTTIAARQSGSGISWLLPFVDGHPPLGWHDTAAYLVLPVLL 279
I P A + I WL P + + PV++
Sbjct: 437 A------------IELRHAP--FIAHLPFTDIVWLADLSAKDP---------FYITPVVM 473
Query: 280 VVSQYASMELMKPPQTDDPAQKNTLLVFKFLPLMIGYFSLSVPSGLSIYWFTNNVLSTAQ 339
+ L P DP Q ++ F+P++ + L+ P+GL +YW NNVLS Q
Sbjct: 474 GATMLLQQRLTPAPA--DPTQAKIMM---FMPVVFTFMFLNFPAGLVVYWLVNNVLSIGQ 528
Query: 340 QVW-LRK 345
Q W LRK
Sbjct: 529 QWWMLRK 535
>sp|A8GQK8|YIDC_RICRS Membrane protein insertase YidC OS=Rickettsia rickettsii (strain
Sheila Smith) GN=yidC PE=3 SV=1
Length = 560
Score = 124 bits (311), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 82/251 (32%), Positives = 129/251 (51%), Gaps = 33/251 (13%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GWF I++ + + + + ++G +I+++TVI+K+ F L K S M+
Sbjct: 338 GWFYIITKPVFYAMNFFYGYVG------NFGVSILIVTVIIKLLMFTLANKSYRSMKKMK 391
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
NLQP+I I+ Y+ ++ R+ E LY++ VNP+AGCLP L IPV+ +Y+ L V
Sbjct: 392 NLQPEIDRIKNLYSDDKARLNQEIMALYKKEKVNPVAGCLPILVQIPVFFSIYKVLY-VT 450
Query: 222 NEGLLTEGFFWIPSLSG--PTTIAARQSGSGISWLLPFVDGHPPLGWHDTAAYLVL---P 276
E + WI LS PTTI + LLPF PP ++L++ P
Sbjct: 451 IEMRQAPFYGWIKDLSAPDPTTIF------NLFGLLPFA---PP-------SFLMIGAWP 494
Query: 277 VLLVVSQYASMELMKPPQTDDPAQKNTLLVFKFLPLMIGYFSLSVPSGLSIYWFTNNVLS 336
+L+ ++ + ++ P+ DP Q V KF+PL+ + S P GL IYW NN+LS
Sbjct: 495 ILMAITMFLQQKM--SPEPADPMQAQ---VMKFMPLIFLFMFSSFPVGLLIYWSWNNILS 549
Query: 337 TAQQVWLRKLG 347
QQ ++ K
Sbjct: 550 IIQQYYINKFN 560
>sp|B0BVZ4|YIDC_RICRO Membrane protein insertase YidC OS=Rickettsia rickettsii (strain
Iowa) GN=yidC PE=3 SV=1
Length = 560
Score = 124 bits (311), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 82/251 (32%), Positives = 129/251 (51%), Gaps = 33/251 (13%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GWF I++ + + + + ++G +I+++TVI+K+ F L K S M+
Sbjct: 338 GWFYIITKPVFYAMNFFYGYVG------NFGVSILIVTVIIKLLMFTLANKSYRSMKKMK 391
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
NLQP+I I+ Y+ ++ R+ E LY++ VNP+AGCLP L IPV+ +Y+ L V
Sbjct: 392 NLQPEIDRIKNLYSDDKARLNQEIMALYKKEKVNPVAGCLPILVQIPVFFSIYKVLY-VT 450
Query: 222 NEGLLTEGFFWIPSLSG--PTTIAARQSGSGISWLLPFVDGHPPLGWHDTAAYLVL---P 276
E + WI LS PTTI + LLPF PP ++L++ P
Sbjct: 451 IEMRQAPFYGWIKDLSAPDPTTIF------NLFGLLPFA---PP-------SFLMIGAWP 494
Query: 277 VLLVVSQYASMELMKPPQTDDPAQKNTLLVFKFLPLMIGYFSLSVPSGLSIYWFTNNVLS 336
+L+ ++ + ++ P+ DP Q V KF+PL+ + S P GL IYW NN+LS
Sbjct: 495 ILMAITMFLQQKM--SPEPADPMQAQ---VMKFMPLIFLFMFSSFPVGLLIYWSWNNILS 549
Query: 337 TAQQVWLRKLG 347
QQ ++ K
Sbjct: 550 IIQQYYINKFN 560
>sp|B2S0E5|YIDC_BORHD Membrane protein insertase YidC OS=Borrelia hermsii (strain DAH)
GN=yidC PE=3 SV=1
Length = 545
Score = 124 bits (310), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 73/239 (30%), Positives = 121/239 (50%), Gaps = 24/239 (10%)
Query: 106 FISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQP 165
FI M+ +++I + I P ++G +I+ LT++V++ FPLT K +T + LQP
Sbjct: 322 FIQVPMQLIMQIFYNVI-----P-NWGLSIMFLTIVVRILIFPLTFKSFRATAELSKLQP 375
Query: 166 KIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGL 225
K+K IQ ++ + +R+ E +LYR+ GVNPL GC P L +PV+ LY ++N
Sbjct: 376 KMKEIQVKFKNDPKRLNEEMGKLYREEGVNPLGGCFPILLQLPVFFALYGLVNNF----F 431
Query: 226 LTEGFFWIPSLSGPTTIAARQSGSGISWLLPFVDGHPPLGWHDTAAYLVLPVLLVVSQYA 285
L G +IP +I G I + G+ W D +LP +++V+Q
Sbjct: 432 LLRGASFIPGWIDDLSI-----GDSIYYF-----GYKVFMWTDIR---ILPFIMMVTQLI 478
Query: 286 SMELMKPPQTDDPAQKNTLLVFKFLPLMIGYFSLSVPSGLSIYWFTNNVLSTAQQVWLR 344
S + + +L F +P+M + +PSGL IYW T N+ + QQ +++
Sbjct: 479 STIISSNVSFKSLGSQQKILYFG-MPIMFFFILYDMPSGLLIYWITTNIFTILQQYYIK 536
>sp|A8GLY9|YIDC_RICAH Membrane protein insertase YidC OS=Rickettsia akari (strain
Hartford) GN=yidC PE=3 SV=1
Length = 560
Score = 124 bits (310), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 81/251 (32%), Positives = 130/251 (51%), Gaps = 33/251 (13%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GWF I++ + + + + ++G +I+++TVI+K+ F L K S ++
Sbjct: 338 GWFYIITKPVFYAMNFFYGYVG------NFGVSILIVTVIIKLLMFTLANKSYRSMKKIK 391
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
NLQP+I I+ Y+ ++ R+ E LY++ VNP+AGCLP L IPV+ +Y+ L V
Sbjct: 392 NLQPEIDRIKNLYSDDKARLNQEIMALYKKEKVNPVAGCLPILVQIPVFFSIYKVLY-VT 450
Query: 222 NEGLLTEGFFWIPSLSG--PTTIAARQSGSGISWLLPFVDGHPPLGWHDTAAYLVL---P 276
E + + WI LS PTTI + LLPF PP ++L++ P
Sbjct: 451 IEMRQAQFYGWIKDLSAPDPTTIF------NLFGLLPF---SPP-------SFLMIGAWP 494
Query: 277 VLLVVSQYASMELMKPPQTDDPAQKNTLLVFKFLPLMIGYFSLSVPSGLSIYWFTNNVLS 336
+L+ ++ + ++ P+ DP Q V KF+PL+ + S P GL IYW NN+LS
Sbjct: 495 ILMAITMFLQQKM--SPEPADPMQAQ---VMKFMPLIFLFMFSSFPVGLLIYWSWNNILS 549
Query: 337 TAQQVWLRKLG 347
QQ ++ K
Sbjct: 550 IIQQYYINKFN 560
>sp|C1D6H8|YIDC_LARHH Membrane protein insertase YidC OS=Laribacter hongkongensis (strain
HLHK9) GN=yidC PE=3 SV=1
Length = 550
Score = 123 bits (309), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 79/251 (31%), Positives = 122/251 (48%), Gaps = 50/251 (19%)
Query: 99 KNGGWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTL 158
K+ GW I+ + ++L L + +++G+AI+LLTV+VK A +PL+ S
Sbjct: 334 KDYGWVTIIATPLFWLLDKLYGLV------HNWGWAIVLLTVLVKAAFYPLSAASYRSMA 387
Query: 159 AMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALS 218
M+ L P+++ ++++Y ++++ Q T +Y+ VNPL GCLP + IPV+IGLY AL
Sbjct: 388 KMKALAPRMQRLKEQYGDDRQKFQQATMEMYKTEKVNPLGGCLPIVVQIPVFIGLYWALL 447
Query: 219 NVANEGLLTEGFFWIPSLSGPTTIAARQSGSGISWLLPFVDGHPPLGW-HDTAA---YLV 274
++ RQ+ W+L W HD A Y +
Sbjct: 448 ---------------------ASVELRQA----PWIL----------WIHDLAKPDPYYI 472
Query: 275 LPVLLVVSQYASMELMKPPQTDDPAQKNTLLVFKFLPLMIGYFSLSVPSGLSIYWFTNNV 334
LP L+ + Y L PP DP Q + K +PL P+GL +YW NN+
Sbjct: 473 LPALMAATMYLQTFLNPPPA--DPLQAKMM---KIMPLAFSVMFFFFPAGLVLYWLVNNI 527
Query: 335 LSTAQQVWLRK 345
LS AQQ W+ K
Sbjct: 528 LSIAQQWWVNK 538
>sp|Q4UN76|YIDC_RICFE Membrane protein insertase YidC OS=Rickettsia felis (strain ATCC
VR-1525 / URRWXCal2) GN=yidC PE=3 SV=1
Length = 560
Score = 123 bits (309), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 81/251 (32%), Positives = 129/251 (51%), Gaps = 33/251 (13%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GWF I++ + + + + ++G +I+++TVI+K+ F L K S M+
Sbjct: 338 GWFYIITKPVFYAMNFFYGYVG------NFGVSILIVTVIIKLLMFTLANKSYRSMKKMK 391
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
NLQP+I I+ Y+ ++ R+ E LY++ VNP+AGCLP L IP++ +Y+ L V
Sbjct: 392 NLQPEIDRIKNLYSDDKARLNQEIMALYKKEKVNPVAGCLPILVQIPLFFSIYKVLY-VT 450
Query: 222 NEGLLTEGFFWIPSLSG--PTTIAARQSGSGISWLLPFVDGHPPLGWHDTAAYLVL---P 276
E + WI LS PTTI + LLPF PP ++L++ P
Sbjct: 451 IEMRQVPFYGWIKDLSAPDPTTIF------NLFGLLPF---SPP-------SFLMIGAWP 494
Query: 277 VLLVVSQYASMELMKPPQTDDPAQKNTLLVFKFLPLMIGYFSLSVPSGLSIYWFTNNVLS 336
+L+ ++ + ++ P+ DP Q V KF+PL+ + S P GL IYW NN+LS
Sbjct: 495 ILMAITMFLQQKM--SPEPADPMQAQ---VMKFMPLIFLFMFSSFPVGLLIYWSWNNILS 549
Query: 337 TAQQVWLRKLG 347
QQ ++ K
Sbjct: 550 IIQQYYINKFN 560
>sp|B8IMM9|YIDC_METNO Membrane protein insertase YidC OS=Methylobacterium nodulans
(strain ORS2060 / LMG 21967) GN=yidC PE=3 SV=1
Length = 605
Score = 123 bits (308), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 79/259 (30%), Positives = 131/259 (50%), Gaps = 31/259 (11%)
Query: 102 GWFGFISE----AMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVEST 157
GWF FI++ A++F K+ + +G +I+++T+I+K+ P+ + S
Sbjct: 358 GWFYFITKPMFKALDFFYKLFGN----------FGVSILVVTLILKLFFLPIANRSYVSM 407
Query: 158 LAMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQAL 217
M+ +QP++ AI++RYA ++ + Q LYR+ +NP+AGC P + IPV+ LY+ L
Sbjct: 408 AKMKAVQPEMTAIRERYADDKVKQQQAMMELYRKEKINPVAGCWPVVIQIPVFFALYKVL 467
Query: 218 SNVANEGLLTEGFFWIPSLSGPTTIAARQSGSGISWLLPFVDGHPPLGWHDTAAYLVLPV 277
V E F WI L+ P + + LLPF D V P+
Sbjct: 468 F-VTIEMRHAPFFGWIRDLAAPDPTSVLN----LFGLLPFAA-------PDLVHLGVWPI 515
Query: 278 LLVVSQYASMELMKPPQTDDPAQKNTLLVFKFLPLMIGYFSLSVPSGLSIYWFTNNVLST 337
++ ++ + M++ P DP Q VF F+P++ + S P+GL IYW NN+LS
Sbjct: 516 VMGITMFLQMKMN--PAPPDPVQAQ---VFTFMPIIFTFMLGSFPAGLVIYWAWNNLLSI 570
Query: 338 AQQVWLRKLGGAKPVVTEN 356
QQ W+ + G K + +N
Sbjct: 571 LQQYWIMRRNGVKVELWDN 589
>sp|A5UD72|YIDC_HAEIE Membrane protein insertase YidC OS=Haemophilus influenzae (strain
PittEE) GN=yidC PE=3 SV=1
Length = 541
Score = 123 bits (308), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 76/240 (31%), Positives = 122/240 (50%), Gaps = 43/240 (17%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GW FI++ + ++L ++ GI + ++G AII +T++VK +PLTK Q S M+
Sbjct: 327 GWAWFIAKPLFWLLTFIQ-GIVS-----NWGLAIICVTIVVKAILYPLTKAQYTSMAKMR 380
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
LQPK++ +++R+ +++R+ E +LY++ VNPL GCLP L +P++I LY
Sbjct: 381 ILQPKMQEMRERFGDDRQRMSQEMMKLYKEEKVNPLGGCLPILLQMPIFIALYWTFLEAV 440
Query: 222 NEGLLTEGFF-WIPSLSGPTTIAARQSGSGISWLLPFVDGHPPLGWHDTAAYLVLPVLLV 280
L FF WI LS Y +LP+L+
Sbjct: 441 E--LRHAPFFGWIQDLSAQD------------------------------PYYILPILMG 468
Query: 281 VSQYASMELMKPPQTDDPAQKNTLLVFKFLPLMIGYFSLSVPSGLSIYWFTNNVLSTAQQ 340
+S + ++ M P DP Q+ V F+PL+ F L PSGL +YW +N+++ AQQ
Sbjct: 469 ISMFL-LQKMSPTPVTDPTQQK---VMNFMPLIFMVFFLWFPSGLVLYWLVSNLITIAQQ 524
>sp|B0UHI1|YIDC_METS4 Membrane protein insertase YidC OS=Methylobacterium sp. (strain
4-46) GN=yidC PE=3 SV=1
Length = 624
Score = 122 bits (306), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 81/255 (31%), Positives = 130/255 (50%), Gaps = 23/255 (9%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GWF FI++ M L + ++G +I+++T+I+K+ P+ + S M+
Sbjct: 377 GWFYFITKPMFKALDLFYKLFG------NFGVSILVVTLILKLFFLPIANRSYVSMAKMK 430
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
+QP++ AI++RYA ++ + Q LY++ +NP+AGC P L IPV+ LY+ L V
Sbjct: 431 AVQPEMTAIRERYADDKVKQQQAMMELYKKEKINPVAGCWPVLIQIPVFFSLYKVLF-VT 489
Query: 222 NEGLLTEGFFWIPSLSGPTTIAARQSGSGISWLLPFVDGHPPLGWHDTAAYLVLPVLLVV 281
E F WI L+ P S + LLPF PP D V P+++ +
Sbjct: 490 IEMRHAPFFGWIRDLAAPDP----TSIVNLFGLLPFT---PP----DLLHLGVWPIVMGI 538
Query: 282 SQYASMELMKPPQTDDPAQKNTLLVFKFLPLMIGYFSLSVPSGLSIYWFTNNVLSTAQQV 341
+ + M++ P DP Q VF F+P++ + S P+GL IYW NN+LS QQ
Sbjct: 539 TMFLQMKMN--PAPPDPVQAQ---VFTFMPIIFTFMLGSFPAGLVIYWAWNNLLSILQQY 593
Query: 342 WLRKLGGAKPVVTEN 356
W+ + G K + +N
Sbjct: 594 WIMRRNGVKVELWDN 608
>sp|C6C0J6|YIDC_DESAD Membrane protein insertase YidC OS=Desulfovibrio salexigens (strain
ATCC 14822 / DSM 2638 / NCIB 8403 / VKM B-1763) GN=yidC
PE=3 SV=1
Length = 539
Score = 122 bits (306), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 77/246 (31%), Positives = 124/246 (50%), Gaps = 43/246 (17%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GWF I++ + L+ + +YG AIILLT+++K+ +PL+ K +S M+
Sbjct: 326 GWFDIIAKPLVVALEWFHQYTN------NYGIAIILLTIVIKILFWPLSHKSYKSMEQMK 379
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
LQP + +++++ ++E + E +LY+ VNP GCLP L IPV+ GLY+AL
Sbjct: 380 RLQPMMAKLREKHGDDREALNKEMMQLYKTYNVNPAGGCLPMLLQIPVFFGLYKALMG-- 437
Query: 222 NEGLLTEGFFWIPSLSGPTTIAARQSGSGISWLLPFVDGHPPLGW-HDTAA---YLVLPV 277
T+A R + LPF D + W D +A + P+
Sbjct: 438 -------------------TVALRH--ADFVHFLPFTD----IVWLADLSAKDPLYITPI 472
Query: 278 LLVVSQYASMELMKPPQTDDPAQKNTLLVFKFLPLMIGYFSLSVPSGLSIYWFTNNVLST 337
++ + + ++ P DP Q+ ++ FLPL+ + L+ PSGL +YW NNVLS
Sbjct: 473 VMGATMFLQQKM--TPSAGDPTQQKIMM---FLPLVFTFMFLNFPSGLVVYWMVNNVLSI 527
Query: 338 AQQVWL 343
AQQ W+
Sbjct: 528 AQQ-WM 532
>sp|A7N0X9|YIDC_VIBHB Membrane protein insertase YidC OS=Vibrio harveyi (strain ATCC
BAA-1116 / BB120) GN=yidC PE=3 SV=1
Length = 540
Score = 122 bits (306), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 78/248 (31%), Positives = 125/248 (50%), Gaps = 49/248 (19%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GW FI++ + +L ++ + ++G AII LT IV+ A +PLTK Q S M+
Sbjct: 328 GWLWFIAKPLHSLLAFIQSFVG------NWGVAIICLTFIVRGAMYPLTKAQYTSMAKMR 381
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
LQPK++A+++R +++R+ E LY++ VNPL GCLP + +P++I LY AL
Sbjct: 382 MLQPKLQAMRERIGDDRQRMSQEMMELYKKEKVNPLGGCLPLILQMPIFIALYWALME-- 439
Query: 222 NEGLLTEGFFWIPSLSGPTTIAARQSGSGISWLLPFVDGHPPLGW-HDTAA---YLVLPV 277
++ R S P GW HD +A Y +LP+
Sbjct: 440 -------------------SVELRHS--------------PFFGWIHDLSAQDPYYILPL 466
Query: 278 LLVVSQYASMELMKPPQTDDPAQKNTLLVFKFLPLMIGYFSLSVPSGLSIYWFTNNVLST 337
L+ S + ++ M P DP Q+ + F+P+M +F L PSGL +YW +N+++
Sbjct: 467 LMGASMFL-IQKMSPTTVTDPMQQK---IMTFMPVMFTFFFLFFPSGLVLYWLVSNIVTL 522
Query: 338 AQQVWLRK 345
QQ + K
Sbjct: 523 IQQTLIYK 530
>sp|A4T0N2|YIDC_POLSQ Membrane protein insertase YidC OS=Polynucleobacter necessarius
subsp. asymbioticus (strain DSM 18221 / CIP 109841 /
QLW-P1DMWA-1) GN=yidC PE=3 SV=1
Length = 557
Score = 122 bits (305), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 72/223 (32%), Positives = 114/223 (51%), Gaps = 38/223 (17%)
Query: 130 SYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLY 189
++G++IILLTV++K+A FPL+ +S M+ +QP++ A++++Y G +++ +Y
Sbjct: 370 NWGWSIILLTVLIKLAFFPLSAASYKSMARMKEVQPRLAAMKEQYKGEPQKLNQAMMEMY 429
Query: 190 RQAGVNPLAGCLPTLATIPVWIGLYQA-LSNVANEGLLTEGFFWIPSLSGPTTIAARQSG 248
R+ +NPL GCLP + IPV+I LY LS+V G WI LS P
Sbjct: 430 RKEKINPLGGCLPVVIQIPVFISLYWVLLSSVEMRG--APWILWIHDLSVPD-------- 479
Query: 249 SGISWLLPFVDGHPPLGWHDTAAYLVLPVLLVVSQYASMELMKPPQTDDPAQKNTLLVFK 308
Y +LPV++ VS + +L P DP Q ++
Sbjct: 480 ----------------------PYYILPVVMAVSMFVQTKLN--PTPPDPVQAKVMM--- 512
Query: 309 FLPLMIGYFSLSVPSGLSIYWFTNNVLSTAQQVWLRKLGGAKP 351
++P++ P+GL +YW TNN+LS AQQ + +L G KP
Sbjct: 513 YMPIVFSIMFFFFPAGLVLYWVTNNLLSIAQQWQINRLFGKKP 555
>sp|B3H2D6|YIDC_ACTP7 Membrane protein insertase YidC OS=Actinobacillus pleuropneumoniae
serotype 7 (strain AP76) GN=yidC PE=3 SV=1
Length = 542
Score = 122 bits (305), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 79/255 (30%), Positives = 127/255 (49%), Gaps = 44/255 (17%)
Query: 90 STSADGATQKNGGWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPL 149
+T+A+ + GW FI++ + +L ++ + ++G AII +T++VK +PL
Sbjct: 316 ATAANLDLTVDYGWAWFIAKPLFALLTFIQSIVT------NWGLAIIGVTIVVKTILYPL 369
Query: 150 TKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPV 209
TK Q S M+ LQPKI+ +++R+ +++R+ E +LY++ VNP+ GCLP L +P+
Sbjct: 370 TKAQYTSMARMRMLQPKIQEMRERFGDDRQRMSQEMMKLYKEEKVNPMGGCLPILIQMPI 429
Query: 210 WIGLYQALSNVANEGLLTEGFF-WIPSLSGPTTIAARQSGSGISWLLPFVDGHPPLGWHD 268
+I LY L FF WI LS P
Sbjct: 430 FIALYWTFMEAVE--LRHAPFFGWIQDLS----------------------AQDP----- 460
Query: 269 TAAYLVLPVLLVVSQYASMELMKPPQTDDPAQKNTLLVFKFLPLMIGYFSLSVPSGLSIY 328
Y +LP+L+ S + ++ M P DP Q+ V F+P+M F L PSGL +Y
Sbjct: 461 ---YYILPLLMGASMFL-LQKMSPSPVTDPVQQK---VMTFMPVMFTVFFLWFPSGLVLY 513
Query: 329 WFTNNVLSTAQQVWL 343
W T+N+++ QQ WL
Sbjct: 514 WLTSNIITIVQQ-WL 527
>sp|B0BR23|YIDC_ACTPJ Membrane protein insertase YidC OS=Actinobacillus pleuropneumoniae
serotype 3 (strain JL03) GN=yidC PE=3 SV=1
Length = 542
Score = 122 bits (305), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 79/255 (30%), Positives = 127/255 (49%), Gaps = 44/255 (17%)
Query: 90 STSADGATQKNGGWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPL 149
+T+A+ + GW FI++ + +L ++ + ++G AII +T++VK +PL
Sbjct: 316 ATAANLDLTVDYGWAWFIAKPLFALLTFIQSIVT------NWGLAIIGVTIVVKTILYPL 369
Query: 150 TKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPV 209
TK Q S M+ LQPKI+ +++R+ +++R+ E +LY++ VNP+ GCLP L +P+
Sbjct: 370 TKAQYTSMARMRMLQPKIQEMRERFGDDRQRMSQEMMKLYKEEKVNPMGGCLPILIQMPI 429
Query: 210 WIGLYQALSNVANEGLLTEGFF-WIPSLSGPTTIAARQSGSGISWLLPFVDGHPPLGWHD 268
+I LY L FF WI LS P
Sbjct: 430 FIALYWTFMEAVE--LRHAPFFGWIQDLS----------------------AQDP----- 460
Query: 269 TAAYLVLPVLLVVSQYASMELMKPPQTDDPAQKNTLLVFKFLPLMIGYFSLSVPSGLSIY 328
Y +LP+L+ S + ++ M P DP Q+ V F+P+M F L PSGL +Y
Sbjct: 461 ---YYILPLLMGASMFL-LQKMSPSPVTDPVQQK---VMTFMPVMFTVFFLWFPSGLVLY 513
Query: 329 WFTNNVLSTAQQVWL 343
W T+N+++ QQ WL
Sbjct: 514 WLTSNIITIVQQ-WL 527
>sp|Q0ASI6|YIDC_MARMM Membrane protein insertase YidC OS=Maricaulis maris (strain MCS10)
GN=yidC PE=3 SV=1
Length = 592
Score = 122 bits (305), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 85/273 (31%), Positives = 130/273 (47%), Gaps = 27/273 (9%)
Query: 100 NGGWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLA 159
N GW F++ ++L +L+ + +G AI+ LT++VK+ FPL + S
Sbjct: 342 NWGWLWFLTRPFVWLLTMLEGALG------QFGLAILALTLMVKIVMFPLANRAYASMAK 395
Query: 160 MQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSN 219
M+ +QPK+ I++RY +Q++ Q LY+ +NPLAGCLP L IP++ LYQ L N
Sbjct: 396 MKAVQPKMAEIKERYGADQQKQQQALMELYKTEKINPLAGCLPILPQIPIFFALYQTLFN 455
Query: 220 VANEGLLTEGFFWIPSLSG--PTTIAARQSGSGISWLLPFVDGHPPLGWHDTAAYLVL-- 275
A E F WI LS PT I W L + + P G L +
Sbjct: 456 -AIEMRHAPFFGWIRDLSAADPTNI----------WNLFGLIPYDPTGIWLIGGVLGIGA 504
Query: 276 -PVLLVVSQYASMELMKPPQTDDPAQKNTLLVFKFLPLMIGYFSLSVPSGLSIYWFTNNV 334
P+++ ++ A L PP DP Q +F FLP++ + +GL IYW NN
Sbjct: 505 WPIIMGLTMAAQQALNPPPP--DPMQAR---IFAFLPIVFTFILAPFAAGLVIYWAWNNF 559
Query: 335 LSTAQQVWLRKLGGAKPVVTENASEIITAGRAK 367
LS QQ + + G + V + + ++ R
Sbjct: 560 LSVLQQYIIMRRHGNETQVDKLVARLLKRDRGD 592
>sp|Q6LW55|YIDC_PHOPR Membrane protein insertase YidC OS=Photobacterium profundum GN=yidC
PE=3 SV=1
Length = 538
Score = 122 bits (305), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 79/260 (30%), Positives = 131/260 (50%), Gaps = 49/260 (18%)
Query: 90 STSADGATQKNGGWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPL 149
+T+A+ + GW FI+ + +L ++ + ++G AI++LT IV+ A +PL
Sbjct: 314 ATAANLNLTVDYGWLWFIASPLHKLLSFIQSIVG------NWGLAIMMLTFIVRGAMYPL 367
Query: 150 TKKQVESTLAMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPV 209
TK Q S M+ LQPK+ A+++R +++R+ E LY++ VNPL GCLP + +P+
Sbjct: 368 TKAQYTSMAKMRMLQPKLTAMRERLGDDRQRMSQEMMELYKKEKVNPLGGCLPIVLQMPI 427
Query: 210 WIGLYQALSNVANEGLLTEGFFWIPSLSGPTTIAARQSGSGISWLLPFVDGHPPLGW-HD 268
+I LY +L ++ R S P GW HD
Sbjct: 428 FIALYWSLME---------------------SVELRHS--------------PFFGWIHD 452
Query: 269 TAA---YLVLPVLLVVSQYASMELMKPPQTDDPAQKNTLLVFKFLPLMIGYFSLSVPSGL 325
+A Y +LP+L+ VS + ++ M P DP Q+ + F+P+M +F L PSGL
Sbjct: 453 LSAQDPYYILPLLMGVSMFM-IQKMSPTTVTDPMQQK---IMTFMPVMFTFFFLFFPSGL 508
Query: 326 SIYWFTNNVLSTAQQVWLRK 345
+YW +NV++ QQ + +
Sbjct: 509 VLYWLVSNVVTLLQQTLIYR 528
>sp|Q87TR5|YIDC_VIBPA Membrane protein insertase YidC OS=Vibrio parahaemolyticus serotype
O3:K6 (strain RIMD 2210633) GN=yidC PE=3 SV=1
Length = 540
Score = 121 bits (304), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 78/248 (31%), Positives = 125/248 (50%), Gaps = 49/248 (19%)
Query: 102 GWFGFISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQ 161
GW FI++ + +L ++ + ++G AII LT IV+ A +PLTK Q S M+
Sbjct: 328 GWLWFIAKPLHSLLAFIQSFVG------NWGVAIICLTFIVRGAMYPLTKAQYTSMAKMR 381
Query: 162 NLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVA 221
LQPK++A+++R +++R+ E LY++ VNPL GCLP + +P++I LY AL
Sbjct: 382 MLQPKLQAMRERIGDDRQRMSQEMMELYKKEKVNPLGGCLPLVLQMPIFIALYWALME-- 439
Query: 222 NEGLLTEGFFWIPSLSGPTTIAARQSGSGISWLLPFVDGHPPLGW-HDTAA---YLVLPV 277
++ R S P GW HD +A Y +LP+
Sbjct: 440 -------------------SVELRHS--------------PFFGWIHDLSAQDPYYILPL 466
Query: 278 LLVVSQYASMELMKPPQTDDPAQKNTLLVFKFLPLMIGYFSLSVPSGLSIYWFTNNVLST 337
L+ S + ++ M P DP Q+ + F+P+M +F L PSGL +YW +N+++
Sbjct: 467 LMGASMFL-IQKMSPTTVTDPMQQK---IMTFMPVMFTFFFLFFPSGLVLYWLVSNIVTL 522
Query: 338 AQQVWLRK 345
QQ + K
Sbjct: 523 IQQTLIYK 530
>sp|Q92SF5|YIDC_RHIME Membrane protein insertase YidC OS=Rhizobium meliloti (strain 1021)
GN=yidC PE=3 SV=2
Length = 594
Score = 121 bits (304), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 82/270 (30%), Positives = 136/270 (50%), Gaps = 41/270 (15%)
Query: 102 GWFGFISE----AMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVEST 157
GWF FI++ M+F ++ + +G AI++ T++VK+ FPL KQ S
Sbjct: 350 GWFYFITKPMFKMMDFFFRLFGN----------FGIAILITTIVVKLIFFPLANKQYASM 399
Query: 158 LAMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQAL 217
M+ +QPK++ +++++ ++ +Q +LY++ +NPLAGC P L IPV+ LY+ +
Sbjct: 400 ANMKKVQPKMEELKKKFGDDRMGLQQAMMQLYKEEKINPLAGCWPILIQIPVFFALYKVI 459
Query: 218 SNVANEGLLTEGFFWIPSLSG--PTTIAARQSGSGISWLLPFVDGHPPLGWHDTAAYL-- 273
V E F WI LS PTTI + LLPF + A+L
Sbjct: 460 Y-VTIEMRHAPFFGWIQDLSAPDPTTII------NLFGLLPF----------EGPAFLHL 502
Query: 274 -VLPVLLVVSQYASMELMKPPQTDDPAQKNTLLVFKFLPLMIGYFSLSVPSGLSIYWFTN 332
+ P+++ V+ + M + P DP Q ++F ++P++ + S P+GL IYW N
Sbjct: 503 GIWPIIMGVTMFLQMRMN--PTPPDPTQA---MLFTWMPVVFTFMLASFPAGLVIYWAWN 557
Query: 333 NVLSTAQQVWLRKLGGAKPVVTENASEIIT 362
N LS QQ + K G K + +N + +
Sbjct: 558 NTLSILQQGIIMKRQGVKVELFDNLKSLFS 587
>sp|Q8UIB3|YIDC_AGRT5 Membrane protein insertase YidC OS=Agrobacterium tumefaciens
(strain C58 / ATCC 33970) GN=yidC PE=3 SV=2
Length = 599
Score = 121 bits (303), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/264 (30%), Positives = 131/264 (49%), Gaps = 37/264 (14%)
Query: 100 NGGWFGFISE----AMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVE 155
+ GWF FI++ M+F + + +G AI+L T++VK FPL KQ
Sbjct: 353 DWGWFYFITKPMFKMMDFFFRYFGN----------FGVAILLTTIVVKALFFPLASKQYA 402
Query: 156 STLAMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQ 215
S M+ +QPK++ ++ ++ ++ +Q +LY++ +NP+AGC P L IPV+ LY+
Sbjct: 403 SMANMKRMQPKMEELKAKHGDDRMAMQQAMMQLYKEEKINPVAGCWPMLLQIPVFFALYK 462
Query: 216 ALSNVANEGLLTEGFFWIPSLSGPTTIAARQSGSGISWLLPFVDGHPPLGWHDTAAYL-- 273
+ V E F WI LS P S + LLP+ D +L
Sbjct: 463 VIY-VTIEMRHAPFFGWIHDLSAPDP----TSLFNLFGLLPY----------DVPHFLMI 507
Query: 274 -VLPVLLVVSQYASMELMKPPQTDDPAQKNTLLVFKFLPLMIGYFSLSVPSGLSIYWFTN 332
V P+++ ++ + M + P DP Q ++F ++PL+ + S P+GL IYW N
Sbjct: 508 GVWPLVMGITMFLQMRM--NPTPPDPTQA---MIFTWMPLIFTFMLASFPAGLVIYWAWN 562
Query: 333 NVLSTAQQVWLRKLGGAKPVVTEN 356
N LS +QQ + K GAK + +N
Sbjct: 563 NTLSISQQALIMKRHGAKIELFDN 586
>sp|A6U5K9|YIDC_SINMW Membrane protein insertase YidC OS=Sinorhizobium medicae (strain
WSM419) GN=yidC PE=3 SV=1
Length = 597
Score = 121 bits (303), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 82/270 (30%), Positives = 136/270 (50%), Gaps = 41/270 (15%)
Query: 102 GWFGFISE----AMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVEST 157
GWF FI++ M+F ++ + +G AI++ T++VK+ FPL KQ S
Sbjct: 353 GWFYFITKPMFKMMDFFFRLFGN----------FGIAILITTIVVKLIFFPLANKQYASM 402
Query: 158 LAMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQAL 217
M+ +QPK++ +++++ ++ +Q +LY++ +NPLAGC P L IPV+ LY+ +
Sbjct: 403 ANMKKVQPKMEELKKKFGDDRMGLQQAMMQLYKEEKINPLAGCWPILIQIPVFFALYKVI 462
Query: 218 SNVANEGLLTEGFFWIPSLSG--PTTIAARQSGSGISWLLPFVDGHPPLGWHDTAAYL-- 273
V E F WI LS PTTI + LLPF + A+L
Sbjct: 463 Y-VTIEMRHAPFFGWIQDLSAPDPTTII------NLFGLLPF----------EGPAFLHL 505
Query: 274 -VLPVLLVVSQYASMELMKPPQTDDPAQKNTLLVFKFLPLMIGYFSLSVPSGLSIYWFTN 332
+ P+++ V+ + M + P DP Q ++F ++P++ + S P+GL IYW N
Sbjct: 506 GIWPIVMGVTMFLQMRMN--PTPPDPTQA---MLFTWMPVVFTFMLASFPAGLVIYWAWN 560
Query: 333 NVLSTAQQVWLRKLGGAKPVVTENASEIIT 362
N LS QQ + K G K + +N + +
Sbjct: 561 NTLSILQQGIIMKRQGVKVELFDNLKSLFS 590
>sp|Q1MM58|YIDC_RHIL3 Membrane protein insertase YidC OS=Rhizobium leguminosarum bv.
viciae (strain 3841) GN=yidC PE=3 SV=1
Length = 598
Score = 121 bits (303), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 84/262 (32%), Positives = 133/262 (50%), Gaps = 37/262 (14%)
Query: 102 GWFGFISEAM----EFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVEST 157
GWF FI++ M +F + + +G AI+ T++VK FPL KQ S
Sbjct: 354 GWFYFITKPMFKLMDFFFRYFGN----------FGVAILCTTIVVKALFFPLASKQYASM 403
Query: 158 LAMQNLQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQAL 217
M+ +QPK++ ++ ++A ++ +Q T +LY++ +NP+AGC P IP++ LY+ +
Sbjct: 404 ANMKRMQPKMEELKAKFADDRMGLQQATMQLYKEEKINPIAGCWPVALQIPIFFSLYKVI 463
Query: 218 SNVANEGLLTEGFFWIPSLSG--PTTIAARQSGSGISWLLPFVDGHPPLGWHDTAAYL-V 274
+ E F WI LS PTTI + LLPF +G T +L V
Sbjct: 464 Y-ITIEMRHAPFFGWIKDLSAPDPTTIV------NLFGLLPF-EG-------PTLLHLGV 508
Query: 275 LPVLLVVSQYASMELMKPPQTDDPAQKNTLLVFKFLPLMIGYFSLSVPSGLSIYWFTNNV 334
P+++ V+ + M + P DP Q ++F ++PL+ + S P+GL IYW NN
Sbjct: 509 WPLIMGVTMFVQMRMN--PTPPDPTQA---MIFNWMPLVFMFMLASFPAGLVIYWAWNNT 563
Query: 335 LSTAQQVWLRKLGGAKPVVTEN 356
LS AQQ + K G K + +N
Sbjct: 564 LSVAQQGLIMKRHGVKVELFDN 585
>sp|B5RLZ9|YIDC_BORDL Membrane protein insertase YidC OS=Borrelia duttonii (strain Ly)
GN=yidC PE=3 SV=1
Length = 545
Score = 120 bits (302), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 121/239 (50%), Gaps = 24/239 (10%)
Query: 106 FISEAMEFVLKILKDGIDAVHVPYSYGFAIILLTVIVKVATFPLTKKQVESTLAMQNLQP 165
F+ M+ +++I + I P ++G +I+ LT++V++ FPLT K +T + LQP
Sbjct: 322 FLQVPMQLIMQIFYNVI-----P-NWGLSIMFLTIVVRILIFPLTFKSFRATAELSKLQP 375
Query: 166 KIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGL 225
K+K IQ ++ + +R+ E S+LYR+ GVNP+ GC P L +PV+ LY ++N
Sbjct: 376 KMKEIQVKFKSDPKRLNEEMSKLYREEGVNPIGGCFPILLQLPVFFALYGLVNNF----F 431
Query: 226 LTEGFFWIPSLSGPTTIAARQSGSGISWLLPFVDGHPPLGWHDTAAYLVLPVLLVVSQYA 285
+ G +IP +I G I + G+ W D +LP +++++Q
Sbjct: 432 VLRGASFIPGWIDDLSI-----GDSIYYF-----GYKVFAWTDIR---ILPFIMMITQLL 478
Query: 286 SMELMKPPQTDDPAQKNTLLVFKFLPLMIGYFSLSVPSGLSIYWFTNNVLSTAQQVWLR 344
S + + L F +P+M + +PSGL IYW T N+ + QQ +++
Sbjct: 479 STIVSSNVSFKSLGAQQKFLYFG-MPIMFFFILYDMPSGLLIYWITTNIFTILQQYYIK 536
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.131 0.378
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 164,151,273
Number of Sequences: 539616
Number of extensions: 6854864
Number of successful extensions: 23410
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 421
Number of HSP's successfully gapped in prelim test: 74
Number of HSP's that attempted gapping in prelim test: 22329
Number of HSP's gapped (non-prelim): 817
length of query: 453
length of database: 191,569,459
effective HSP length: 121
effective length of query: 332
effective length of database: 126,275,923
effective search space: 41923606436
effective search space used: 41923606436
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 63 (28.9 bits)