Query         012925
Match_columns 453
No_of_seqs    351 out of 2245
Neff          5.2 
Searched_HMMs 29240
Date          Mon Mar 25 18:53:53 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012925.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/012925hhsearch_pdb -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 2l6l_A DNAJ homolog subfamily   99.8 4.8E-20 1.6E-24  166.8   4.2  115   46-163     7-148 (155)
  2 1hdj_A Human HSP40, HDJ-1; mol  99.8 1.3E-19 4.5E-24  145.7   6.2   70   48-117     2-72  (77)
  3 2ej7_A HCG3 gene; HCG3 protein  99.8 2.4E-19 8.2E-24  145.6   6.0   70   45-114     5-77  (82)
  4 2dn9_A DNAJ homolog subfamily   99.8 1.8E-19 6.2E-24  145.4   4.8   70   45-114     3-74  (79)
  5 2ctr_A DNAJ homolog subfamily   99.8 4.5E-19 1.5E-23  146.4   6.8   74   45-118     3-77  (88)
  6 2ctp_A DNAJ homolog subfamily   99.8 2.1E-19 7.2E-24  144.8   4.4   70   46-115     4-74  (78)
  7 2och_A Hypothetical protein DN  99.8 3.8E-19 1.3E-23  141.7   4.9   67   47-114     6-72  (73)
  8 1bq0_A DNAJ, HSP40; chaperone,  99.8 3.1E-19 1.1E-23  151.4   4.1   70   48-117     2-73  (103)
  9 1wjz_A 1700030A21RIK protein;   99.8   3E-19   1E-23  148.4   3.9   69   46-114    13-89  (94)
 10 2cug_A Mkiaa0962 protein; DNAJ  99.8 5.8E-19   2E-23  145.7   5.5   70   46-115    14-84  (88)
 11 2dmx_A DNAJ homolog subfamily   99.7 6.6E-19 2.3E-23  146.3   5.3   71   46-116     6-79  (92)
 12 2yua_A Williams-beuren syndrom  99.7 5.7E-19   2E-23  148.9   4.1   70   45-114    13-84  (99)
 13 2lgw_A DNAJ homolog subfamily   99.7 1.4E-18 4.8E-23  147.0   5.4   69   49-117     2-73  (99)
 14 2ctw_A DNAJ homolog subfamily   99.7 4.2E-19 1.4E-23  152.4   2.1   71   46-116    14-86  (109)
 15 2o37_A Protein SIS1; HSP40, J-  99.7 1.7E-18 5.9E-23  144.1   5.4   70   47-117     6-75  (92)
 16 2ctq_A DNAJ homolog subfamily   99.7 1.9E-18 6.4E-23  148.9   5.7   71   46-116    17-89  (112)
 17 2qsa_A DNAJ homolog DNJ-2; J-d  99.7 1.4E-17 4.7E-22  142.5   3.9   68   47-114    13-86  (109)
 18 3lz8_A Putative chaperone DNAJ  99.7   4E-18 1.4E-22  172.1   0.0   72   43-114    22-94  (329)
 19 3bvo_A CO-chaperone protein HS  99.7 3.8E-17 1.3E-21  155.3   6.4   80   34-113    24-116 (207)
 20 3apq_A DNAJ homolog subfamily   99.7 2.7E-17 9.1E-22  152.6   5.0   69   49-117     2-72  (210)
 21 2ys8_A RAB-related GTP-binding  99.7 4.5E-17 1.5E-21  135.3   4.2   62   47-108    25-87  (90)
 22 2pf4_E Small T antigen; PP2A,   99.6 1.9E-17 6.4E-22  153.6  -0.4   65   48-114    10-76  (174)
 23 1gh6_A Large T antigen; tumor   99.6   3E-17   1E-21  142.5  -2.3   64   48-113     7-72  (114)
 24 3hho_A CO-chaperone protein HS  99.6 3.4E-16 1.2E-20  144.8   4.4   68   47-114     2-78  (174)
 25 1fpo_A HSC20, chaperone protei  99.6 4.8E-16 1.6E-20  143.5   3.5   66   49-114     1-75  (171)
 26 1faf_A Large T antigen; J doma  99.6 4.1E-16 1.4E-20  126.8   2.2   61   48-110    10-72  (79)
 27 1iur_A KIAA0730 protein; DNAJ   99.6 4.2E-16 1.4E-20  129.5   1.8   64   46-109    13-79  (88)
 28 3uo3_A J-type CO-chaperone JAC  99.5 2.2E-15 7.6E-20  140.4   3.1   67   46-113     8-81  (181)
 29 1n4c_A Auxilin; four helix bun  99.5   2E-15 6.9E-20  140.9   2.6   61   49-109   117-182 (182)
 30 3ag7_A Putative uncharacterize  99.5 3.4E-15 1.2E-19  128.0   2.5   58   47-105    39-105 (106)
 31 2guz_A Mitochondrial import in  99.5 4.6E-15 1.6E-19  118.1   2.8   60   46-107    11-71  (71)
 32 2qwo_B Putative tyrosine-prote  99.5   5E-15 1.7E-19  124.2   2.7   54   49-102    33-91  (92)
 33 3apo_A DNAJ homolog subfamily   99.5 1.7E-15 5.9E-20  165.6  -0.5   72   46-117    18-91  (780)
 34 2y4t_A DNAJ homolog subfamily   98.9 8.3E-10 2.9E-14  108.4   4.7   63   49-111   382-449 (450)
 35 2guz_B Mitochondrial import in  98.6 2.8E-08 9.6E-13   78.2   4.2   51   49-101     4-57  (65)
 36 1dwl_A Ferredoxin I; electron   88.7    0.37 1.3E-05   34.3   3.6   54  141-195     2-58  (59)
 37 1dax_A Ferredoxin I; electron   88.5   0.043 1.5E-06   40.6  -1.6   56  141-196     4-62  (64)
 38 2pzi_A Probable serine/threoni  85.0    0.48 1.7E-05   50.8   3.5   47   47-99    627-675 (681)
 39 1iqz_A Ferredoxin; iron-sulfer  84.6   0.082 2.8E-06   41.2  -2.1   31  141-172     4-34  (81)
 40 1rof_A Ferredoxin; electron tr  78.7    0.57   2E-05   33.4   0.8   25  141-165     3-27  (60)
 41 1sj1_A Ferredoxin; thermostabi  71.2    0.47 1.6E-05   34.6  -1.4   25  141-165     4-28  (66)
 42 1f2g_A Ferredoxin II; electron  66.8    0.92 3.1E-05   32.4  -0.6   24  141-165     2-25  (58)
 43 1xer_A Ferredoxin; electron tr  49.6     5.3 0.00018   31.8   1.1   27  140-166    37-64  (103)
 44 1jb0_C Photosystem I iron-sulf  38.2     7.5 0.00026   29.2   0.3   25  142-166     4-29  (80)
 45 1kqf_B FDH-N beta S, formate d  33.1     9.2 0.00031   37.3   0.1   62  140-201   125-192 (294)
 46 3i9v_9 NADH-quinone oxidoreduc  29.7      25 0.00086   30.6   2.3   17  144-160    49-65  (182)
 47 1ti6_B Pyrogallol hydroxytrans  29.7      50  0.0017   31.8   4.6   62  140-201    91-162 (274)
 48 3gyx_B Adenylylsulfate reducta  27.3      18 0.00063   32.2   1.0   55  141-197     2-65  (166)
 49 1hfe_L Protein (Fe-only hydrog  26.6      62  0.0021   33.0   4.9   68  140-210    27-97  (421)
 50 1bc6_A 7-Fe ferredoxin; electr  23.9      80  0.0027   23.4   4.0   62  142-208     2-69  (77)
 51 2vpz_B NRFC protein; oxidoredu  20.6      28 0.00095   31.7   0.8   71  140-211    82-159 (195)

No 1  
>2l6l_A DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, J-domain, chaperone; NMR {Homo sapiens}
Probab=99.78  E-value=4.8e-20  Score=166.81  Aligned_cols=115  Identities=23%  Similarity=0.352  Sum_probs=84.3

Q ss_pred             CCccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCc--------hHHHHHHHHHHHhhcCCCCchhhhhHHHhhhc
Q 012925           46 NMDFDLYDLLGIDSSSDQSQIKTAYRMLQKRCHPDIAGSA--------GHDMAIILNEAYSVLSDPNSRLAYDKEQAKTA  117 (453)
Q Consensus        46 ~~~~DyYevLGV~~~As~~eIKkAYRklalk~HPDk~~~~--------a~~~f~~I~eAYevLsDp~kR~~YD~~g~~~~  117 (453)
                      +...|||+||||+++++.++||+|||+|++++|||+++..        +.+.|+.|++||++|+||.+|+.||..+....
T Consensus         7 ~~~~~~y~iLgv~~~a~~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~a~~~f~~i~~Ay~~L~dp~~R~~Yd~~~~~~~   86 (155)
T 2l6l_A            7 MPKKDWYSILGADPSANISDLKQKYQKLILMYHPDKQSTDVPAGTVEECVQKFIEIDQAWKILGNEETKREYDLQRCEDD   86 (155)
T ss_dssp             CCCSHHHHHHTCCTTCCHHHHHHHHHHHHHHHSCCCCCCCCTTHHHHHHHHHHHHHHHHHHHSSSHHHHCHHHHHHHHHH
T ss_pred             CCCCChhHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCchhHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHcchhh
Confidence            4567999999999999999999999999999999998744        35899999999999999999999998764321


Q ss_pred             --CCC---------CC-----CCCCCcccccCCcchhhhhcccce---ecccCcccccccCceee
Q 012925          118 --GLR---------GY-----TGKPIYSVWFGSESEQRAVFVDEV---KCVGCLKCALFAGKTFA  163 (453)
Q Consensus       118 --~~~---------g~-----~g~~~fs~ffG~~~~~~~vFvDE~---~CIGC~kCsl~a~~tFa  163 (453)
                        ...         .+     .....+.+.||+.+.   +..++.   ..++|..|+++..+.|+
T Consensus        87 ~~~~~~~~~~~~~~~m~~~e~~~~f~~~CrCG~~f~---i~~~~l~~~~~v~C~sCSl~~~v~~~  148 (155)
T 2l6l_A           87 LRNVGPVDAQVYLEEMSWNEGDHSFYLSCRCGGKYS---VSKDEAEEVSLISCDTCSLIIELLHY  148 (155)
T ss_dssp             HHTTCSSSEEEETTTSEEETTTTEEEEECSSSCEEE---EETTHHHHCCEEECSSSSCEEEEECC
T ss_pred             ccccccccceeeHHHhccccCCcEEEEcCCCCCeEE---ecHHHhCCCCEEECCCCceEEEEEEc
Confidence              100         00     001123445665432   222222   57889999888777665


No 2  
>1hdj_A Human HSP40, HDJ-1; molecular chaperone; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=99.78  E-value=1.3e-19  Score=145.66  Aligned_cols=70  Identities=33%  Similarity=0.504  Sum_probs=64.3

Q ss_pred             ccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCC-chHHHHHHHHHHHhhcCCCCchhhhhHHHhhhc
Q 012925           48 DFDLYDLLGIDSSSDQSQIKTAYRMLQKRCHPDIAGS-AGHDMAIILNEAYSVLSDPNSRLAYDKEQAKTA  117 (453)
Q Consensus        48 ~~DyYevLGV~~~As~~eIKkAYRklalk~HPDk~~~-~a~~~f~~I~eAYevLsDp~kR~~YD~~g~~~~  117 (453)
                      ..|||+||||+++++.++||+|||+|++++|||+++. .+.+.|+.|++||++|+||.+|..||..+..+.
T Consensus         2 ~~~~y~iLgv~~~as~~~Ik~ayr~l~~~~HPD~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~   72 (77)
T 1hdj_A            2 GKDYYQTLGLARGASDEEIKRAYRRQALRYHPDKNKEPGAEEKFKEIAEAYDVLSDPRKREIFDRYGEEGL   72 (77)
T ss_dssp             CCCSHHHHTCCTTCCHHHHHHHHHHHHHTTCTTTCCCTTHHHHHHHHHHHHHHTTCHHHHHHHHHTCGGGC
T ss_pred             CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHHCCHHHHHHHHHHccccc
Confidence            4689999999999999999999999999999999874 468999999999999999999999999876543


No 3  
>2ej7_A HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.77  E-value=2.4e-19  Score=145.64  Aligned_cols=70  Identities=31%  Similarity=0.440  Sum_probs=63.7

Q ss_pred             CCCccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCc---hHHHHHHHHHHHhhcCCCCchhhhhHHHh
Q 012925           45 LNMDFDLYDLLGIDSSSDQSQIKTAYRMLQKRCHPDIAGSA---GHDMAIILNEAYSVLSDPNSRLAYDKEQA  114 (453)
Q Consensus        45 s~~~~DyYevLGV~~~As~~eIKkAYRklalk~HPDk~~~~---a~~~f~~I~eAYevLsDp~kR~~YD~~g~  114 (453)
                      +....|||+||||+++++.++||+|||++++++|||+++..   +.+.|+.|++||++|+||.+|..||..+.
T Consensus         5 ~~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~g~   77 (82)
T 2ej7_A            5 SSGMVDYYEVLDVPRQASSEAIKKAYRKLALKWHPDKNPENKEEAERRFKQVAEAYEVLSDAKKRDIYDRYGS   77 (82)
T ss_dssp             CSSSCCHHHHTTCCTTCCHHHHHHHHHHHHTTSCTTTCSTTHHHHHHHHHHHHHHHHHHSSTTHHHHHHHTCC
T ss_pred             CCCCcCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHHCCHHHHHHHHHcCc
Confidence            34567999999999999999999999999999999998753   57899999999999999999999998764


No 4  
>2dn9_A DNAJ homolog subfamily A member 3; J-domain, TID1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.77  E-value=1.8e-19  Score=145.36  Aligned_cols=70  Identities=36%  Similarity=0.506  Sum_probs=64.2

Q ss_pred             CCCccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCC--CchHHHHHHHHHHHhhcCCCCchhhhhHHHh
Q 012925           45 LNMDFDLYDLLGIDSSSDQSQIKTAYRMLQKRCHPDIAG--SAGHDMAIILNEAYSVLSDPNSRLAYDKEQA  114 (453)
Q Consensus        45 s~~~~DyYevLGV~~~As~~eIKkAYRklalk~HPDk~~--~~a~~~f~~I~eAYevLsDp~kR~~YD~~g~  114 (453)
                      +....|||+||||+++++.++||++||+|++++|||+++  +.+.+.|+.|++||++|+||.+|..||..+.
T Consensus         3 ~~~~~~~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~g~   74 (79)
T 2dn9_A            3 SGSSGDYYQILGVPRNASQKEIKKAYYQLAKKYHPDTNKDDPKAKEKFSQLAEAYEVLSDEVKRKQYDAYGS   74 (79)
T ss_dssp             SSCCSCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCSSCTTHHHHHHHHHHHHHHHHSHHHHHHHHHSCC
T ss_pred             CCCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHhccC
Confidence            355789999999999999999999999999999999986  3468999999999999999999999998764


No 5  
>2ctr_A DNAJ homolog subfamily B member 9; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.76  E-value=4.5e-19  Score=146.42  Aligned_cols=74  Identities=32%  Similarity=0.433  Sum_probs=66.5

Q ss_pred             CCCccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCc-hHHHHHHHHHHHhhcCCCCchhhhhHHHhhhcC
Q 012925           45 LNMDFDLYDLLGIDSSSDQSQIKTAYRMLQKRCHPDIAGSA-GHDMAIILNEAYSVLSDPNSRLAYDKEQAKTAG  118 (453)
Q Consensus        45 s~~~~DyYevLGV~~~As~~eIKkAYRklalk~HPDk~~~~-a~~~f~~I~eAYevLsDp~kR~~YD~~g~~~~~  118 (453)
                      +....|||+||||+++++.++||+|||+|++++|||+++.. +.+.|++|++||++|+||.+|..||..+.....
T Consensus         3 ~~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~~   77 (88)
T 2ctr_A            3 SGSSGSYYDILGVPKSASERQIKKAFHKLAMKYHPDKNKSPDAEAKFREIAEAYETLSDANRRKEYDTLGHSAFT   77 (88)
T ss_dssp             SCCCCSHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCCSHHHHHHHHHHHHHHHHHHSSHHHHHHHHTCHHHHT
T ss_pred             CCCCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCChHHHHHHHHHHHHHHHHCCHHHHHHHHHhCccccc
Confidence            34567999999999999999999999999999999999743 588999999999999999999999998765543


No 6  
>2ctp_A DNAJ homolog subfamily B member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.76  E-value=2.1e-19  Score=144.81  Aligned_cols=70  Identities=30%  Similarity=0.537  Sum_probs=64.2

Q ss_pred             CCccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCC-chHHHHHHHHHHHhhcCCCCchhhhhHHHhh
Q 012925           46 NMDFDLYDLLGIDSSSDQSQIKTAYRMLQKRCHPDIAGS-AGHDMAIILNEAYSVLSDPNSRLAYDKEQAK  115 (453)
Q Consensus        46 ~~~~DyYevLGV~~~As~~eIKkAYRklalk~HPDk~~~-~a~~~f~~I~eAYevLsDp~kR~~YD~~g~~  115 (453)
                      ....|||+||||+++++.++||+|||++++++|||+++. .+.+.|+.|++||++|+||.+|..||..+..
T Consensus         4 ~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~   74 (78)
T 2ctp_A            4 GSSGDYYEILGVSRGASDEDLKKAYRRLALKFHPDKNHAPGATEAFKAIGTAYAVLSNPEKRKQYDQFGSG   74 (78)
T ss_dssp             SCSCCHHHHHTCCTTCCHHHHHHHHHHHHTTSCTTTCSSHHHHHHHHHHHHHHHHHTSHHHHHHHHHTCSC
T ss_pred             CCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHHCCHHHHHHHHHcCcc
Confidence            456799999999999999999999999999999999864 3688999999999999999999999997653


No 7  
>2och_A Hypothetical protein DNJ-12; HSP40, J-domain, chaperone, APC90013.2, structural genomics, protein structure initiative; 1.86A {Caenorhabditis elegans} PDB: 2lo1_A
Probab=99.75  E-value=3.8e-19  Score=141.72  Aligned_cols=67  Identities=31%  Similarity=0.581  Sum_probs=61.5

Q ss_pred             CccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHhhcCCCCchhhhhHHHh
Q 012925           47 MDFDLYDLLGIDSSSDQSQIKTAYRMLQKRCHPDIAGSAGHDMAIILNEAYSVLSDPNSRLAYDKEQA  114 (453)
Q Consensus        47 ~~~DyYevLGV~~~As~~eIKkAYRklalk~HPDk~~~~a~~~f~~I~eAYevLsDp~kR~~YD~~g~  114 (453)
                      ...|||+||||+++++.++||++||++++++|||+++. ..+.|+.|++||++|+||.+|..||..|.
T Consensus         6 ~~~~~y~iLgl~~~a~~~eIk~ayr~l~~~~HPD~~~~-~~~~f~~i~~Ay~~L~d~~~R~~YD~~g~   72 (73)
T 2och_A            6 KETGYYDVLGVKPDASDNELKKAYRKMALKFHPDKNPD-GAEQFKQISQAYEVLSDEKKRQIYDQGGE   72 (73)
T ss_dssp             CCCCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCTT-CHHHHHHHHHHHHHHTSHHHHHHHHHTC-
T ss_pred             CCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCcC-HHHHHHHHHHHHHHHCCHHHHHHHHhcCC
Confidence            45799999999999999999999999999999999854 46899999999999999999999999764


No 8  
>1bq0_A DNAJ, HSP40; chaperone, heat shock, protein folding, DNAK; NMR {Escherichia coli} SCOP: a.2.3.1 PDB: 1xbl_A 1bqz_A
Probab=99.75  E-value=3.1e-19  Score=151.43  Aligned_cols=70  Identities=30%  Similarity=0.543  Sum_probs=64.2

Q ss_pred             ccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCC--CchHHHHHHHHHHHhhcCCCCchhhhhHHHhhhc
Q 012925           48 DFDLYDLLGIDSSSDQSQIKTAYRMLQKRCHPDIAG--SAGHDMAIILNEAYSVLSDPNSRLAYDKEQAKTA  117 (453)
Q Consensus        48 ~~DyYevLGV~~~As~~eIKkAYRklalk~HPDk~~--~~a~~~f~~I~eAYevLsDp~kR~~YD~~g~~~~  117 (453)
                      ..|||+||||+++++.++||+|||+|++++|||+++  +.+.+.|++|++||++|+||.+|+.||..+....
T Consensus         2 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~~   73 (103)
T 1bq0_A            2 KQDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAAYDQYGHAAF   73 (103)
T ss_dssp             CCCSTTTTSSCSSCCHHHHHHHHHHHHTTTCTTTCTTTCTHHHHHHHHTTTTTSTTCSHHHHHTTTSTTTSS
T ss_pred             CCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHCCHHHHHHHHHHhhhhh
Confidence            468999999999999999999999999999999986  3468899999999999999999999999886543


No 9  
>1wjz_A 1700030A21RIK protein; J-domain, DNAJ like protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, chaperone; NMR {Mus musculus} SCOP: a.2.3.1
Probab=99.75  E-value=3e-19  Score=148.43  Aligned_cols=69  Identities=26%  Similarity=0.491  Sum_probs=63.2

Q ss_pred             CCccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCC--------chHHHHHHHHHHHhhcCCCCchhhhhHHHh
Q 012925           46 NMDFDLYDLLGIDSSSDQSQIKTAYRMLQKRCHPDIAGS--------AGHDMAIILNEAYSVLSDPNSRLAYDKEQA  114 (453)
Q Consensus        46 ~~~~DyYevLGV~~~As~~eIKkAYRklalk~HPDk~~~--------~a~~~f~~I~eAYevLsDp~kR~~YD~~g~  114 (453)
                      +...|||+||||+++++.++||+|||+|++++|||+++.        .+.+.|++|++||++|+||.+|+.||..+.
T Consensus        13 ~~~~~~y~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~l~   89 (94)
T 1wjz_A           13 TLKKDWYSILGADPSANMSDLKQKYQKLILLYHPDKQSADVPAGTMEECMQKFIEIDQAWKILGNEETKKKYDLQRS   89 (94)
T ss_dssp             SSCSCHHHHTTCCTTCCHHHHHHHHHHTTSSSCSTTCCTTCCHHHHHHHHHHHHHHHHHHHHHSSSSHHHHHHHHSC
T ss_pred             CCCCChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCChhhhHHHHHHHHHHHHHHHHHCCHHHHHHHHHHcc
Confidence            556899999999999999999999999999999999862        257899999999999999999999998764


No 10 
>2cug_A Mkiaa0962 protein; DNAJ-like domain, structural genomics, molecular chaperone, NPPSFA; NMR {Mus musculus}
Probab=99.75  E-value=5.8e-19  Score=145.72  Aligned_cols=70  Identities=34%  Similarity=0.628  Sum_probs=64.6

Q ss_pred             CCccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCC-chHHHHHHHHHHHhhcCCCCchhhhhHHHhh
Q 012925           46 NMDFDLYDLLGIDSSSDQSQIKTAYRMLQKRCHPDIAGS-AGHDMAIILNEAYSVLSDPNSRLAYDKEQAK  115 (453)
Q Consensus        46 ~~~~DyYevLGV~~~As~~eIKkAYRklalk~HPDk~~~-~a~~~f~~I~eAYevLsDp~kR~~YD~~g~~  115 (453)
                      ....|||+||||+++++.++||+|||++++++|||+++. .+.+.|++|++||++|+||.+|..||..+..
T Consensus        14 ~~~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~   84 (88)
T 2cug_A           14 ALDFDPYRVLGVSRTASQADIKKAYKKLAREWHPDKNKDPGAEDRFIQISKAYEILSNEEKRTNYDHYGSG   84 (88)
T ss_dssp             SSSSCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCCSTTHHHHHHHHHHHHHHHHSHHHHHHHHHHTTC
T ss_pred             cCCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCChhHHHHHHHHHHHHHHHCCHHHHHHHHHcCCC
Confidence            457899999999999999999999999999999999874 4689999999999999999999999998753


No 11 
>2dmx_A DNAJ homolog subfamily B member 8; DNAJ J domain, helix-turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.75  E-value=6.6e-19  Score=146.26  Aligned_cols=71  Identities=34%  Similarity=0.548  Sum_probs=64.4

Q ss_pred             CCccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCc---hHHHHHHHHHHHhhcCCCCchhhhhHHHhhh
Q 012925           46 NMDFDLYDLLGIDSSSDQSQIKTAYRMLQKRCHPDIAGSA---GHDMAIILNEAYSVLSDPNSRLAYDKEQAKT  116 (453)
Q Consensus        46 ~~~~DyYevLGV~~~As~~eIKkAYRklalk~HPDk~~~~---a~~~f~~I~eAYevLsDp~kR~~YD~~g~~~  116 (453)
                      ....|||+||||+++++.++||++||+|++++|||+++..   +++.|++|++||++|+||.+|..||..+...
T Consensus         6 ~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~   79 (92)
T 2dmx_A            6 SGMANYYEVLGVQASASPEDIKKAYRKLALRWHPDKNPDNKEEAEKKFKLVSEAYEVLSDSKKRSLYDRAGCDS   79 (92)
T ss_dssp             CCCCCHHHHHTCCTTCCTTHHHHHHHHHHHHTCTTTCSSCSHHHHHHHHHHHHHHHHHHSHHHHHHHHHHCSCS
T ss_pred             CCCcCHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCccHHHHHHHHHHHHHHHHHHCCHHHHHHHHHhCccc
Confidence            4457999999999999999999999999999999998743   5789999999999999999999999987543


No 12 
>2yua_A Williams-beuren syndrome chromosome region 18 protein; J domain, all helix protein, chaperone, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.74  E-value=5.7e-19  Score=148.90  Aligned_cols=70  Identities=33%  Similarity=0.423  Sum_probs=64.2

Q ss_pred             CCCccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCC--chHHHHHHHHHHHhhcCCCCchhhhhHHHh
Q 012925           45 LNMDFDLYDLLGIDSSSDQSQIKTAYRMLQKRCHPDIAGS--AGHDMAIILNEAYSVLSDPNSRLAYDKEQA  114 (453)
Q Consensus        45 s~~~~DyYevLGV~~~As~~eIKkAYRklalk~HPDk~~~--~a~~~f~~I~eAYevLsDp~kR~~YD~~g~  114 (453)
                      .+...|||+||||+++++.++||+|||+|++++|||+++.  .+.+.|++|++||++|+||.+|+.||..+.
T Consensus        13 ~~~~~~~Y~vLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~l~   84 (99)
T 2yua_A           13 SYSRTALYDLLGVPSTATQAQIKAAYYRQCFLYHPDRNSGSAEAAERFTRISQAYVVLGSATLRRKYDRGLL   84 (99)
T ss_dssp             SSCSSHHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCSSCSHHHHHHHHHHHHHHHTTSHHHHHHHHHTCC
T ss_pred             CCCccCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHhcc
Confidence            4667899999999999999999999999999999999853  368899999999999999999999998643


No 13 
>2lgw_A DNAJ homolog subfamily B member 2; J domain, HSJ1A, CO-chaperon, chaperone; NMR {Homo sapiens}
Probab=99.73  E-value=1.4e-18  Score=147.02  Aligned_cols=69  Identities=30%  Similarity=0.427  Sum_probs=62.6

Q ss_pred             cccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCc---hHHHHHHHHHHHhhcCCCCchhhhhHHHhhhc
Q 012925           49 FDLYDLLGIDSSSDQSQIKTAYRMLQKRCHPDIAGSA---GHDMAIILNEAYSVLSDPNSRLAYDKEQAKTA  117 (453)
Q Consensus        49 ~DyYevLGV~~~As~~eIKkAYRklalk~HPDk~~~~---a~~~f~~I~eAYevLsDp~kR~~YD~~g~~~~  117 (453)
                      .|||+||||+++++.++||+|||++++++|||+++..   +.+.|+.|++||++|+||.+|..||..+....
T Consensus         2 ~d~Y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~~a~~~f~~I~~AY~vL~d~~~R~~YD~~g~~~~   73 (99)
T 2lgw_A            2 ASYYEILDVPRSASADDIKKAYRRKALQWHPDKNPDNKEFAEKKFKEVAEAYEVLSDKHKREIYDRYGREGL   73 (99)
T ss_dssp             CCHHHHSSSCTTSCHHHHHHHHHHHHHHTSTTTCCSCCHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHC--
T ss_pred             CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCccHHHHHHHHHHHHHHHHHHCCHHHHHHHHHhCcccc
Confidence            5899999999999999999999999999999998743   57899999999999999999999999886543


No 14 
>2ctw_A DNAJ homolog subfamily C member 5; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.73  E-value=4.2e-19  Score=152.40  Aligned_cols=71  Identities=31%  Similarity=0.468  Sum_probs=64.9

Q ss_pred             CCccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCC--chHHHHHHHHHHHhhcCCCCchhhhhHHHhhh
Q 012925           46 NMDFDLYDLLGIDSSSDQSQIKTAYRMLQKRCHPDIAGS--AGHDMAIILNEAYSVLSDPNSRLAYDKEQAKT  116 (453)
Q Consensus        46 ~~~~DyYevLGV~~~As~~eIKkAYRklalk~HPDk~~~--~a~~~f~~I~eAYevLsDp~kR~~YD~~g~~~  116 (453)
                      ....|||+||||+++++.++||+|||+|++++|||+++.  .+.+.|++|++||++|+||.+|+.||.++..+
T Consensus        14 ~~~~~~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~g~~~   86 (109)
T 2ctw_A           14 TSGESLYHVLGLDKNATSDDIKKSYRKLALKYHPDKNPDNPEAADKFKEINNAHAILTDATKRNIYDKYGSLG   86 (109)
T ss_dssp             SCSCCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTSTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHTCHHH
T ss_pred             CCCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHcCHHHHHHHHHhcccc
Confidence            467899999999999999999999999999999999964  35889999999999999999999999987654


No 15 
>2o37_A Protein SIS1; HSP40, J-domain, cochaperone, APC90055.5, structural genomics, PSI-2, protein structure initiative; 1.25A {Saccharomyces cerevisiae}
Probab=99.73  E-value=1.7e-18  Score=144.15  Aligned_cols=70  Identities=31%  Similarity=0.574  Sum_probs=63.9

Q ss_pred             CccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHhhcCCCCchhhhhHHHhhhc
Q 012925           47 MDFDLYDLLGIDSSSDQSQIKTAYRMLQKRCHPDIAGSAGHDMAIILNEAYSVLSDPNSRLAYDKEQAKTA  117 (453)
Q Consensus        47 ~~~DyYevLGV~~~As~~eIKkAYRklalk~HPDk~~~~a~~~f~~I~eAYevLsDp~kR~~YD~~g~~~~  117 (453)
                      ...|||+||||+++++.++||+|||+|++++|||+++. ..+.|++|++||++|+||.+|+.||..+....
T Consensus         6 ~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~-~~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~~   75 (92)
T 2o37_A            6 KETKLYDLLGVSPSANEQELKKGYRKAALKYHPDKPTG-DTEKFKEISEAFEILNDPQKREIYDQYGLEAA   75 (92)
T ss_dssp             SCCHHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTSTTC-CHHHHHHHHHHHHHHTSHHHHHHHHHHCHHHH
T ss_pred             cCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC-hHHHHHHHHHHHHHHCCHHHHHHHHHHCHHHh
Confidence            45799999999999999999999999999999999854 46799999999999999999999999876543


No 16 
>2ctq_A DNAJ homolog subfamily C member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.73  E-value=1.9e-18  Score=148.94  Aligned_cols=71  Identities=28%  Similarity=0.409  Sum_probs=65.3

Q ss_pred             CCccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCC--CchHHHHHHHHHHHhhcCCCCchhhhhHHHhhh
Q 012925           46 NMDFDLYDLLGIDSSSDQSQIKTAYRMLQKRCHPDIAG--SAGHDMAIILNEAYSVLSDPNSRLAYDKEQAKT  116 (453)
Q Consensus        46 ~~~~DyYevLGV~~~As~~eIKkAYRklalk~HPDk~~--~~a~~~f~~I~eAYevLsDp~kR~~YD~~g~~~  116 (453)
                      ....|||+||||+++++.++||+|||+|++++|||+++  +.+.+.|++|++||++|+||.+|+.||..+...
T Consensus        17 ~~~~d~Y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~~   89 (112)
T 2ctq_A           17 EDTEDYYTLLGCDELSSVEQILAEFKVRALECHPDKHPENPKAVETFQKLQKAKEILTNEESRARYDHWRRSQ   89 (112)
T ss_dssp             CCCCCHHHHTTCCTTSCHHHHHHHHHHHHHTTCTTTCTTCSTHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHT
T ss_pred             cCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHCCHHHHHHHHHhhhhc
Confidence            45689999999999999999999999999999999986  336899999999999999999999999998754


No 17 
>2qsa_A DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, structural genomics, PSI-2, Pro structure initiative; 1.68A {Caenorhabditis elegans}
Probab=99.67  E-value=1.4e-17  Score=142.52  Aligned_cols=68  Identities=25%  Similarity=0.440  Sum_probs=63.1

Q ss_pred             CccccccccCCCCCC-CHHHHHHHHHHHHHHhCCCCCCC-----chHHHHHHHHHHHhhcCCCCchhhhhHHHh
Q 012925           47 MDFDLYDLLGIDSSS-DQSQIKTAYRMLQKRCHPDIAGS-----AGHDMAIILNEAYSVLSDPNSRLAYDKEQA  114 (453)
Q Consensus        47 ~~~DyYevLGV~~~A-s~~eIKkAYRklalk~HPDk~~~-----~a~~~f~~I~eAYevLsDp~kR~~YD~~g~  114 (453)
                      ...|||+||||++++ +.++||+|||+|++++|||+++.     .+.+.|++|++||++|+||.+|+.||..+.
T Consensus        13 ~~~~~y~iLgv~~~a~s~~eIk~aYr~l~~~~HPDk~~~~~~~~~a~~~f~~i~~AY~~L~d~~~R~~YD~~~~   86 (109)
T 2qsa_A           13 GLENCYDVLEVNREEFDKQKLAKAYRALARKHHPDRVKNKEEKLLAEERFRVIATAYETLKDDEAKTNYDYYLD   86 (109)
T ss_dssp             TTSCHHHHTTCCGGGCCHHHHHHHHHHHHHHTCGGGCCSHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHH
T ss_pred             CCCCHHHHcCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccccHHHHHHHHHHHHHHHHHCCHHHHHHHHHhcc
Confidence            467999999999999 99999999999999999999864     257899999999999999999999999875


No 18 
>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A
Probab=99.67  E-value=4e-18  Score=172.08  Aligned_cols=72  Identities=33%  Similarity=0.493  Sum_probs=0.0

Q ss_pred             cCCCCccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCC-chHHHHHHHHHHHhhcCCCCchhhhhHHHh
Q 012925           43 ASLNMDFDLYDLLGIDSSSDQSQIKTAYRMLQKRCHPDIAGS-AGHDMAIILNEAYSVLSDPNSRLAYDKEQA  114 (453)
Q Consensus        43 ~ss~~~~DyYevLGV~~~As~~eIKkAYRklalk~HPDk~~~-~a~~~f~~I~eAYevLsDp~kR~~YD~~g~  114 (453)
                      .+.+...|||+||||+++|+.+|||+|||+|+++||||+++. .+.++|++|++||++|+||.+|+.||+++.
T Consensus        22 ~~~m~~~d~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~   94 (329)
T 3lz8_A           22 SNAMELKDYYAILGVQPTDDLKTIKTAYRRLARKYHPDVSKENDAEAKFKDLAEAWEVLKDEQRRAEYDQLWQ   94 (329)
T ss_dssp             -------------------------------------------------------------------------
T ss_pred             cccccccCHHHHcCcCCCCCHHHHHHHHHHHHHHHCCCCCCChHHHHHHHHHHHHHHHhhhhhhhcccchhhc
Confidence            334666899999999999999999999999999999999864 468899999999999999999999999743


No 19 
>3bvo_A CO-chaperone protein HSCB, mitochondrial precurso; structural genomics medical relev protein structure initiative, PSI-2; 3.00A {Homo sapiens}
Probab=99.67  E-value=3.8e-17  Score=155.31  Aligned_cols=80  Identities=24%  Similarity=0.414  Sum_probs=67.4

Q ss_pred             CCCcccccccCC----CCccccccccCCCCC--CCHHHHHHHHHHHHHHhCCCCCCCc-------hHHHHHHHHHHHhhc
Q 012925           34 NSNSVTCCKASL----NMDFDLYDLLGIDSS--SDQSQIKTAYRMLQKRCHPDIAGSA-------GHDMAIILNEAYSVL  100 (453)
Q Consensus        34 ~~~~~~C~~~ss----~~~~DyYevLGV~~~--As~~eIKkAYRklalk~HPDk~~~~-------a~~~f~~I~eAYevL  100 (453)
                      ....+.|-+|.+    ....|||+||||+++  ++.++||++||+|++++|||+++..       +.+.|+.||+||+||
T Consensus        24 ~~~~~fC~~c~~~q~~~~~~d~y~lLgv~~~~~a~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vL  103 (207)
T 3bvo_A           24 REDRFFCPQCRALQAPDPTRDYFSLMDCNRSFRVDTAKLQHRYQQLQRLVHPDFFSQRSQTEKDFSEKHSTLVNDAYKTL  103 (207)
T ss_dssp             CSCCCBCTTTCCBCCCCTTCCHHHHTTSCSCSCCCHHHHHHHHHHHHHHHCGGGGTTSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cccccccccccccCCCCCCCCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence            345677855653    236899999999987  7999999999999999999998643       256899999999999


Q ss_pred             CCCCchhhhhHHH
Q 012925          101 SDPNSRLAYDKEQ  113 (453)
Q Consensus       101 sDp~kR~~YD~~g  113 (453)
                      +||.+|..||...
T Consensus       104 sdp~~R~~Yd~~l  116 (207)
T 3bvo_A          104 LAPLSRGLYLLKL  116 (207)
T ss_dssp             HSHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHh
Confidence            9999999999864


No 20 
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=99.67  E-value=2.7e-17  Score=152.64  Aligned_cols=69  Identities=32%  Similarity=0.542  Sum_probs=63.7

Q ss_pred             cccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCC--CchHHHHHHHHHHHhhcCCCCchhhhhHHHhhhc
Q 012925           49 FDLYDLLGIDSSSDQSQIKTAYRMLQKRCHPDIAG--SAGHDMAIILNEAYSVLSDPNSRLAYDKEQAKTA  117 (453)
Q Consensus        49 ~DyYevLGV~~~As~~eIKkAYRklalk~HPDk~~--~~a~~~f~~I~eAYevLsDp~kR~~YD~~g~~~~  117 (453)
                      .|||+||||+++++.++||+|||+|++++|||+++  +.+.++|+.|++||++|+||.+|+.||.+|....
T Consensus         2 ~~~y~~l~~~~~a~~~~ik~ay~~l~~~~HPD~~~~~~~~~~~f~~i~~Ay~~L~~~~~r~~yd~~~~~~~   72 (210)
T 3apq_A            2 QNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRKKYDKYGEKGL   72 (210)
T ss_dssp             CCHHHHHTCCTTCCHHHHHHHHHHHHHHHCGGGCTTCTTHHHHHHHHHHHHHHHTSHHHHHHHHHHTTTTC
T ss_pred             CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHhCCHHHHHHHHHhccccc
Confidence            58999999999999999999999999999999985  3468899999999999999999999999986544


No 21 
>2ys8_A RAB-related GTP-binding protein RABJ; DNAJ domain, RAS-associated protein RAP1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.65  E-value=4.5e-17  Score=135.28  Aligned_cols=62  Identities=23%  Similarity=0.309  Sum_probs=57.3

Q ss_pred             CccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCC-chHHHHHHHHHHHhhcCCCCchhh
Q 012925           47 MDFDLYDLLGIDSSSDQSQIKTAYRMLQKRCHPDIAGS-AGHDMAIILNEAYSVLSDPNSRLA  108 (453)
Q Consensus        47 ~~~DyYevLGV~~~As~~eIKkAYRklalk~HPDk~~~-~a~~~f~~I~eAYevLsDp~kR~~  108 (453)
                      ...|||+||||+++++.++||+|||+|+++||||+++. .+.++|++|++||++|+||.+|..
T Consensus        25 ~~~~~y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~~~~f~~i~~Ay~~L~d~~~R~~   87 (90)
T 2ys8_A           25 NSKDSWDMLGVKPGASRDEVNKAYRKLAVLLHPDKCVAPGSEDAFKAVVNARTALLKNIKSGP   87 (90)
T ss_dssp             TCSSHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTTCCCTTHHHHHHHHHHHHHHHHHHHCCSC
T ss_pred             cCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHHCCcccccC
Confidence            45899999999999999999999999999999999964 468999999999999999998874


No 22 
>2pf4_E Small T antigen; PP2A, SV40, DNAJ, aalpha subunit, hydrolase regulat protein complex; 3.10A {Simian virus 40} PDB: 2pkg_C
Probab=99.63  E-value=1.9e-17  Score=153.64  Aligned_cols=65  Identities=25%  Similarity=0.325  Sum_probs=58.0

Q ss_pred             ccccccccCCCCCCC--HHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHhhcCCCCchhhhhHHHh
Q 012925           48 DFDLYDLLGIDSSSD--QSQIKTAYRMLQKRCHPDIAGSAGHDMAIILNEAYSVLSDPNSRLAYDKEQA  114 (453)
Q Consensus        48 ~~DyYevLGV~~~As--~~eIKkAYRklalk~HPDk~~~~a~~~f~~I~eAYevLsDp~kR~~YD~~g~  114 (453)
                      ..|||+||||+++|+  .++||+|||++++++|||+++.  +++|++|++||++|+||.+|+.||++|.
T Consensus        10 ~~d~Y~vLGl~~~as~~~~eIKkAYRkLa~~~HPDk~~~--~e~F~~I~~AYevLsdp~kR~~YD~~G~   76 (174)
T 2pf4_E           10 SLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGD--EEKMKKMNTLYKKMEDGVKYAHQPDFGG   76 (174)
T ss_dssp             HHHHHHTTTCCGGGTTCHHHHHHHHHHHGGGCSCC---C--CTTTTHHHHHHHHHHHHHHHHTSCGGGG
T ss_pred             cccHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCcCCCCC--HHHHHHHHHHHHHhCCHHHHHHHhccCC
Confidence            468999999999998  6999999999999999999865  4799999999999999999999999885


No 23 
>1gh6_A Large T antigen; tumor suppressor, oncoprotein, antitumor protein; 3.20A {Simian virus 40} SCOP: a.2.3.1
Probab=99.60  E-value=3e-17  Score=142.55  Aligned_cols=64  Identities=25%  Similarity=0.332  Sum_probs=59.5

Q ss_pred             ccccccccCCCCCCCH--HHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHhhcCCCCchhhhhHHH
Q 012925           48 DFDLYDLLGIDSSSDQ--SQIKTAYRMLQKRCHPDIAGSAGHDMAIILNEAYSVLSDPNSRLAYDKEQ  113 (453)
Q Consensus        48 ~~DyYevLGV~~~As~--~eIKkAYRklalk~HPDk~~~~a~~~f~~I~eAYevLsDp~kR~~YD~~g  113 (453)
                      ..|||+||||+++++.  ++||+|||+|++++|||+++.  .++|++|++||+||+||.+|+.||.++
T Consensus         7 ~~~~Y~iLgv~~~as~~~~eIk~aYr~la~~~HPDk~~~--~e~f~~I~~AYevL~d~~~R~~~~~~~   72 (114)
T 1gh6_A            7 SLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGD--EEKMKKMNTLYKKMEDGVKYAHQPDFG   72 (114)
T ss_dssp             HHHHHHHTTCCTTSCSCHHHHHHHHHHTTTTCCTTTCCT--TTTTHHHHHHHHHHHHHHHSCCSSCCS
T ss_pred             hhhHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCCCCCcc--HHHHHHHHHHHHHHCCHHHHHHhhhcc
Confidence            4689999999999999  999999999999999999865  579999999999999999999999754


No 24 
>3hho_A CO-chaperone protein HSCB homolog; structural genomics, IDP01304, center for structural genomics of infectious diseases, CSGI; 2.15A {Vibrio cholerae}
Probab=99.60  E-value=3.4e-16  Score=144.81  Aligned_cols=68  Identities=31%  Similarity=0.496  Sum_probs=60.6

Q ss_pred             CccccccccCCCCCCC--HHHHHHHHHHHHHHhCCCCCCCc-------hHHHHHHHHHHHhhcCCCCchhhhhHHHh
Q 012925           47 MDFDLYDLLGIDSSSD--QSQIKTAYRMLQKRCHPDIAGSA-------GHDMAIILNEAYSVLSDPNSRLAYDKEQA  114 (453)
Q Consensus        47 ~~~DyYevLGV~~~As--~~eIKkAYRklalk~HPDk~~~~-------a~~~f~~I~eAYevLsDp~kR~~YD~~g~  114 (453)
                      +..|||+||||+++++  .++||++||+|++++|||+++..       +.+.|+.|++||+||+||.+|..||..+.
T Consensus         2 ~~~d~Y~iLgl~~~a~id~~eIk~aYr~l~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vL~dp~~R~~Yd~~l~   78 (174)
T 3hho_A            2 NAMNYFELFGLPIQFELDGSLLSSQFRALQKRFHPDNFATASERDRLMAVQQAAQINDAYQTLKDPLRRAEYLLSLQ   78 (174)
T ss_dssp             --CCHHHHTTCCSSSCCCHHHHHHHHHHHHHHHCGGGSTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHT
T ss_pred             CCCCHHHHcCcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCcHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHcc
Confidence            3579999999999988  99999999999999999998643       35789999999999999999999998753


No 25 
>1fpo_A HSC20, chaperone protein HSCB; molecular chaperone; 1.80A {Escherichia coli} SCOP: a.2.3.1 a.23.1.1
Probab=99.58  E-value=4.8e-16  Score=143.52  Aligned_cols=66  Identities=24%  Similarity=0.432  Sum_probs=59.9

Q ss_pred             cccccccCCCCCC--CHHHHHHHHHHHHHHhCCCCCCCc-------hHHHHHHHHHHHhhcCCCCchhhhhHHHh
Q 012925           49 FDLYDLLGIDSSS--DQSQIKTAYRMLQKRCHPDIAGSA-------GHDMAIILNEAYSVLSDPNSRLAYDKEQA  114 (453)
Q Consensus        49 ~DyYevLGV~~~A--s~~eIKkAYRklalk~HPDk~~~~-------a~~~f~~I~eAYevLsDp~kR~~YD~~g~  114 (453)
                      .|||+||||++++  +.++||++||+|+++||||+++..       +.+.|+.||+||+||+||.+|..||..+.
T Consensus         1 ~d~y~lLgl~~~a~i~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vL~dp~~R~~Yd~~l~   75 (171)
T 1fpo_A            1 MDYFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQTLRHPLMRAEYLLSLH   75 (171)
T ss_dssp             CHHHHHTTCCSSSCCCHHHHHHHHHHHHHHTCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHTT
T ss_pred             CCHHHHCCCCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHhc
Confidence            3899999999999  999999999999999999998643       24689999999999999999999998753


No 26 
>1faf_A Large T antigen; J domain, HPD motif, anti-parallel hairpin of helices, viral protein; NMR {Murine polyomavirus} SCOP: a.2.3.1
Probab=99.57  E-value=4.1e-16  Score=126.80  Aligned_cols=61  Identities=23%  Similarity=0.365  Sum_probs=55.6

Q ss_pred             ccccccccCCCCC--CCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHhhcCCCCchhhhh
Q 012925           48 DFDLYDLLGIDSS--SDQSQIKTAYRMLQKRCHPDIAGSAGHDMAIILNEAYSVLSDPNSRLAYD  110 (453)
Q Consensus        48 ~~DyYevLGV~~~--As~~eIKkAYRklalk~HPDk~~~~a~~~f~~I~eAYevLsDp~kR~~YD  110 (453)
                      ..++|+||||+++  ++.++||+|||+|++++|||+++  +.++|++|++||++|+|+.+|..++
T Consensus        10 ~~~~y~iLgl~~~~~a~~~eIk~aYr~la~~~HPDk~~--~~~~f~~i~~AYe~L~~~~~r~~~~   72 (79)
T 1faf_A           10 KERLLELLKLPRQLWGDFGRMQQAYKQQSLLLHPDKGG--SHALMQELNSLWGTFKTEVYNLRMN   72 (79)
T ss_dssp             HHHHHHHHTCCSSSTTCHHHHHHHHHHHHHHSSGGGSC--CHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCC--CHHHHHHHHHHHHHHhhHHHHHHHh
Confidence            3579999999999  99999999999999999999975  3689999999999999999888743


No 27 
>1iur_A KIAA0730 protein; DNAJ like domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=99.57  E-value=4.2e-16  Score=129.53  Aligned_cols=64  Identities=14%  Similarity=0.079  Sum_probs=57.2

Q ss_pred             CCccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCc---hHHHHHHHHHHHhhcCCCCchhhh
Q 012925           46 NMDFDLYDLLGIDSSSDQSQIKTAYRMLQKRCHPDIAGSA---GHDMAIILNEAYSVLSDPNSRLAY  109 (453)
Q Consensus        46 ~~~~DyYevLGV~~~As~~eIKkAYRklalk~HPDk~~~~---a~~~f~~I~eAYevLsDp~kR~~Y  109 (453)
                      ....|+|+||||+++++.+|||+|||+|+++||||+++..   ++++|++|++||++|+|...|..+
T Consensus        13 ~~~~~~y~vLgv~~~as~~eIKkaYrkla~~~HPDk~~~~~~~a~~~F~~I~~AYevL~~~~~r~~~   79 (88)
T 1iur_A           13 SILKEVTSVVEQAWKLPESERKKIIRRLYLKWHPDKNPENHDIANEVFKHLQNEINRLEKQAFLDQN   79 (88)
T ss_dssp             SCHHHHHHHHHHTTSSCSHHHHHHHHHHHHHTCTTTSSSCHHHHHHHHHHHHHHHHHHHHHTTCSSS
T ss_pred             ccHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHCCCCCCCchHHHHHHHHHHHHHHHHHHhhcccccc
Confidence            4457899999999999999999999999999999999754   589999999999999998777443


No 28 
>3uo3_A J-type CO-chaperone JAC1, mitochondrial; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, J-protein; 1.85A {Saccharomyces cerevisiae} PDB: 3uo2_A
Probab=99.53  E-value=2.2e-15  Score=140.41  Aligned_cols=67  Identities=34%  Similarity=0.587  Sum_probs=60.6

Q ss_pred             CCcccccccc------CCCC-CCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHhhcCCCCchhhhhHHH
Q 012925           46 NMDFDLYDLL------GIDS-SSDQSQIKTAYRMLQKRCHPDIAGSAGHDMAIILNEAYSVLSDPNSRLAYDKEQ  113 (453)
Q Consensus        46 ~~~~DyYevL------GV~~-~As~~eIKkAYRklalk~HPDk~~~~a~~~f~~I~eAYevLsDp~kR~~YD~~g  113 (453)
                      ....|||+||      |+++ +++.++||++||+|++++|||+++. +.+.|+.|++||+||+||.+|..||..+
T Consensus         8 ~~~~d~y~ll~~~~p~~~~~~~a~~~eIk~aYr~la~~~HPDk~~~-a~~~f~~i~~AY~vL~dp~~R~~Yd~~l   81 (181)
T 3uo3_A            8 RFTSTFYELFPKTFPKKLPIWTIDQSRLRKEYRQLQAQHHPDMAQQ-GSEQSSTLNQAYHTLKDPLRRSQYMLKL   81 (181)
T ss_dssp             CCSCCTGGGCTTTCTTCSCCSCCCHHHHHHHHHHHHHTCCTTSCCS-CSSGGGSHHHHHHHHHSHHHHHHHHHHH
T ss_pred             CCCCCHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHhCcCCCcc-HHHHHHHHHHHHHHHcChHHHHHHHHHH
Confidence            3457999999      4665 8999999999999999999999965 6789999999999999999999999976


No 29 
>1n4c_A Auxilin; four helix bundle, protein binding; NMR {Bos taurus} SCOP: a.2.3.1 PDB: 1xi5_J
Probab=99.52  E-value=2e-15  Score=140.90  Aligned_cols=61  Identities=23%  Similarity=0.344  Sum_probs=57.2

Q ss_pred             cccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCc-----hHHHHHHHHHHHhhcCCCCchhhh
Q 012925           49 FDLYDLLGIDSSSDQSQIKTAYRMLQKRCHPDIAGSA-----GHDMAIILNEAYSVLSDPNSRLAY  109 (453)
Q Consensus        49 ~DyYevLGV~~~As~~eIKkAYRklalk~HPDk~~~~-----a~~~f~~I~eAYevLsDp~kR~~Y  109 (453)
                      .|||+||||+++++.++||+|||++++++|||+++..     +++.|+.|++||++|+||.+|+.|
T Consensus       117 ~d~Y~vLgv~~~As~~eIKkAYRklal~~HPDK~~~~~~e~~A~~~F~~I~eAYevLsD~~kR~~Y  182 (182)
T 1n4c_A          117 ETKWKPVGMADLVTPEQVKKVYRKAVLVVHPDKATGQPYEQYAKMIFMELNDAWSEFENQGQKPLY  182 (182)
T ss_dssp             CCCCCCCCGGGGSSHHHHHHHHHHHHHHTCGGGGSSCTTHHHHHHHHHHHHHHHHHHHHHHSSCCC
T ss_pred             cchhhcCCCCCCCCHHHHHHHHHHHHHHHCcCcCCCcchHHHHHHHHHHHHHHHHHHCCHHhhhhC
Confidence            6999999999999999999999999999999998633     578999999999999999999987


No 30 
>3ag7_A Putative uncharacterized protein F9E10.5; J-domain, AN auxilin-like J-domain containing protein, JAC1, chloroplast accumulation response; 1.80A {Arabidopsis thaliana}
Probab=99.51  E-value=3.4e-15  Score=128.03  Aligned_cols=58  Identities=14%  Similarity=0.168  Sum_probs=51.4

Q ss_pred             CccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCC---------chHHHHHHHHHHHhhcCCCCc
Q 012925           47 MDFDLYDLLGIDSSSDQSQIKTAYRMLQKRCHPDIAGS---------AGHDMAIILNEAYSVLSDPNS  105 (453)
Q Consensus        47 ~~~DyYevLGV~~~As~~eIKkAYRklalk~HPDk~~~---------~a~~~f~~I~eAYevLsDp~k  105 (453)
                      ...|||+|||++. |+.++||+|||++++++||||++.         .++++|+.|++||++|+|+..
T Consensus        39 ~~~d~Y~vl~~~~-As~~eIKkAYRklal~~HPDK~~~~~~~~e~~~~A~~~F~~I~~AYevLsd~~~  105 (106)
T 3ag7_A           39 SGSGWKPVPLMDM-IEGNAVRKSYQRALLILHPDKLQQKGASANQKYMAEKVFELLQEAWDHFNTLGP  105 (106)
T ss_dssp             TTSCCCCCCGGGS-CSHHHHHHHHHHHHHHHCHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTTCC
T ss_pred             ccCCHHHHcCCCC-CCHHHHHHHHHHHHHHHCcCcCCCcccchhhHHHHHHHHHHHHHHHHHHcCccc
Confidence            3579999999996 999999999999999999999752         137899999999999999863


No 31 
>2guz_A Mitochondrial import inner membrane translocase subunit TIM14; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=99.50  E-value=4.6e-15  Score=118.09  Aligned_cols=60  Identities=20%  Similarity=0.247  Sum_probs=53.4

Q ss_pred             CCccccccccCCCC-CCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHhhcCCCCchh
Q 012925           46 NMDFDLYDLLGIDS-SSDQSQIKTAYRMLQKRCHPDIAGSAGHDMAIILNEAYSVLSDPNSRL  107 (453)
Q Consensus        46 ~~~~DyYevLGV~~-~As~~eIKkAYRklalk~HPDk~~~~a~~~f~~I~eAYevLsDp~kR~  107 (453)
                      +...++|+||||++ +++.++||+|||+|++++|||+++  +.+.|++|++||++|+|+..|+
T Consensus        11 m~~~~~y~iLgl~~~~a~~~eIk~ayr~l~~~~HPDk~g--~~~~f~~i~~Aye~L~~~~~rk   71 (71)
T 2guz_A           11 MNSKEALQILNLTENTLTKKKLKEVHRKIMLANHPDKGG--SPFLATKINEAKDFLEKRGISK   71 (71)
T ss_dssp             CCHHHHHHHTTCCTTTCCHHHHHHHHHHHHHHHCGGGTC--CHHHHHHHHHHHHHHHHHCCCC
T ss_pred             CCHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHCCCCCC--CHHHHHHHHHHHHHHhhhhhcC
Confidence            44568999999999 799999999999999999999963  4579999999999999987764


No 32 
>2qwo_B Putative tyrosine-protein phosphatase auxilin; chaperone-cochaperone complex, ATP-binding, nucleotide-bindi nucleus, phosphorylation, stress response; HET: ADP; 1.70A {Bos taurus} PDB: 2qwp_B* 2qwq_B* 2qwr_B* 2qwn_B* 1nz6_A
Probab=99.50  E-value=5e-15  Score=124.19  Aligned_cols=54  Identities=22%  Similarity=0.294  Sum_probs=49.7

Q ss_pred             cccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCc-----hHHHHHHHHHHHhhcCC
Q 012925           49 FDLYDLLGIDSSSDQSQIKTAYRMLQKRCHPDIAGSA-----GHDMAIILNEAYSVLSD  102 (453)
Q Consensus        49 ~DyYevLGV~~~As~~eIKkAYRklalk~HPDk~~~~-----a~~~f~~I~eAYevLsD  102 (453)
                      .++|++|||+++++.+|||+|||+++++||||+++..     +.++|+.|++||+||.+
T Consensus        33 ~~~y~~Lgv~~~as~~eIKkAYRklal~~HPDK~~~~~~~~~A~~~F~~i~eAyevL~~   91 (92)
T 2qwo_B           33 ETKWKPVGMADLVTPEQVKKVYRKAVLVVHPCKATGQPYEQYAKMIFMELNDAWSEFEN   91 (92)
T ss_dssp             CCSCCCCCGGGSSSHHHHHHHHHHHHHHTCHHHHTTSTTHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccCCeecCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchhHhHHHHHHHHHHHHHHHHHh
Confidence            5899999999999999999999999999999998643     57899999999999975


No 33 
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=99.49  E-value=1.7e-15  Score=165.60  Aligned_cols=72  Identities=32%  Similarity=0.537  Sum_probs=40.8

Q ss_pred             CCccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCC--CchHHHHHHHHHHHhhcCCCCchhhhhHHHhhhc
Q 012925           46 NMDFDLYDLLGIDSSSDQSQIKTAYRMLQKRCHPDIAG--SAGHDMAIILNEAYSVLSDPNSRLAYDKEQAKTA  117 (453)
Q Consensus        46 ~~~~DyYevLGV~~~As~~eIKkAYRklalk~HPDk~~--~~a~~~f~~I~eAYevLsDp~kR~~YD~~g~~~~  117 (453)
                      ....|||+||||+++|+.++||+|||+|++++|||+++  +.+.++|++|++||++|+||.+|+.||++|..+.
T Consensus        18 ~~~~~~y~~lg~~~~a~~~~i~~ay~~l~~~~hpd~~~~~~~~~~~f~~i~~ay~~L~~~~~r~~yd~~~~~~~   91 (780)
T 3apo_A           18 RHDQNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRKKYDKYGEKGL   91 (780)
T ss_dssp             -----CHHHHTCCTTCCHHHHHHHHCC-----------------------CTHHHHHHSHHHHHHHTTC-----
T ss_pred             CCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHHcChHHHHHHHhhccccc
Confidence            55789999999999999999999999999999999985  3468899999999999999999999999886543


No 34 
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=98.88  E-value=8.3e-10  Score=108.35  Aligned_cols=63  Identities=33%  Similarity=0.520  Sum_probs=54.2

Q ss_pred             cccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCc-----hHHHHHHHHHHHhhcCCCCchhhhhH
Q 012925           49 FDLYDLLGIDSSSDQSQIKTAYRMLQKRCHPDIAGSA-----GHDMAIILNEAYSVLSDPNSRLAYDK  111 (453)
Q Consensus        49 ~DyYevLGV~~~As~~eIKkAYRklalk~HPDk~~~~-----a~~~f~~I~eAYevLsDp~kR~~YD~  111 (453)
                      .++|++||+.++++.++|+++|+++++++|||+.+..     +.++|+.|++||++|+||++|..||.
T Consensus       382 ~~~y~~lg~~~~~~~~~~~~~y~~~~l~~~pd~~~~~~~~~~a~~~~~~i~~ay~~L~d~~~r~~yd~  449 (450)
T 2y4t_A          382 RDYYKILGVKRNAKKQEIIKAYRKLALQWHPDNFQNEEEKKKAEKKFIDIAAAKEVLSDPEMRKKFDD  449 (450)
T ss_dssp             CCSGGGSCSSTTCCTTHHHHHHHHHHHHSCGGGCCSHHHHHHHHHHHHHHHHHHHHSSGGGGC-----
T ss_pred             hhHHHHhCCCccCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHHHHhCCHHHHHhccC
Confidence            4899999999999999999999999999999998643     47899999999999999999999996


No 35 
>2guz_B Mitochondrial import inner membrane translocase subunit TIM16; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=98.59  E-value=2.8e-08  Score=78.15  Aligned_cols=51  Identities=18%  Similarity=0.204  Sum_probs=44.8

Q ss_pred             cccccccCCCCC---CCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHhhcC
Q 012925           49 FDLYDLLGIDSS---SDQSQIKTAYRMLQKRCHPDIAGSAGHDMAIILNEAYSVLS  101 (453)
Q Consensus        49 ~DyYevLGV~~~---As~~eIKkAYRklalk~HPDk~~~~a~~~f~~I~eAYevLs  101 (453)
                      .+-|+||||+++   ++.++|+++||+|...+|||+.+.  ...+..|++|+++|.
T Consensus         4 ~EA~~ILgv~~~~~~a~~~~Ik~~yr~Lm~~nhPDkGGS--~yl~~ki~~Ake~l~   57 (65)
T 2guz_B            4 DESCKILNIEESKGDLNMDKINNRFNYLFEVNDKEKGGS--FYLQSKVYRAAERLK   57 (65)
T ss_dssp             HHHHHHTTCCGGGTCCSHHHHHHHHHHHHHHTCGGGTCC--HHHHHHHHHHHHHHH
T ss_pred             HHHHHHhCCCCCcCcCCHHHHHHHHHHHHHHhCCCCCCC--HHHHHHHHHHHHHHH
Confidence            346889999999   999999999999999999999743  467788999999985


No 36 
>1dwl_A Ferredoxin I; electron transfer, model, heteronuclear docking; HET: HEC; NMR {Desulfomicrobium norvegicum} SCOP: i.4.1.1
Probab=88.75  E-value=0.37  Score=34.34  Aligned_cols=54  Identities=19%  Similarity=0.355  Sum_probs=32.6

Q ss_pred             hcccceecccCcccccccCceeeeecccCcceeecccCCCCCCCcc-ccccce--EEE
Q 012925          141 VFVDEVKCVGCLKCALFAGKTFAIESAYGRARVVAQWADPEHNPGS-YRNVPS--RLI  195 (453)
Q Consensus       141 vFvDE~~CIGC~kCsl~a~~tFaie~~~GRARV~~Q~~d~E~~iq~-IqsCPv--Is~  195 (453)
                      +.+|...|+||+.|...++..|.+.+..|...+. ...+.-..... ++.||.  |.+
T Consensus         2 i~i~~~~C~~C~~C~~~Cp~~~~~~~~~~~~~~~-~~~~~c~~C~~C~~~CP~~Ai~~   58 (59)
T 1dwl_A            2 IVIDHEECIGCESCVELCPEVFAMIDGEEKAMVT-APDSTAECAQDAIDACPVEAISK   58 (59)
T ss_dssp             EEESSCCCSSCCGGGGTSTTTEEEEECSSCEEES-CTTCCCGGGGTGGGGSTTCCEEE
T ss_pred             eEEChhhCcChhHHHHHCCHHheecCCCCcEEEe-cChhhhhHHHHHHHhCCHhhEEc
Confidence            3567789999999999999767663233443321 11111122345 788998  554


No 37 
>1dax_A Ferredoxin I; electron transport, electron-transfer protein, 4Fe-4S cluster; NMR {Desulfovibrio africanus} SCOP: d.58.1.4 PDB: 1dfd_A 1fxr_A
Probab=88.55  E-value=0.043  Score=40.58  Aligned_cols=56  Identities=20%  Similarity=0.356  Sum_probs=33.5

Q ss_pred             hcccceecccCcccccccCceeeeecccCcceeecccCCCCCCCcc-ccccce--EEEe
Q 012925          141 VFVDEVKCVGCLKCALFAGKTFAIESAYGRARVVAQWADPEHNPGS-YRNVPS--RLIV  196 (453)
Q Consensus       141 vFvDE~~CIGC~kCsl~a~~tFaie~~~GRARV~~Q~~d~E~~iq~-IqsCPv--Is~V  196 (453)
                      +.+|...|+||+.|...++..|.+++..|...+.....+.-..-.. ++.||+  |.+.
T Consensus         4 ~~id~~~C~~Cg~C~~~CP~~~~~~~~~~~~~~~~~~~~~C~~C~~C~~~CP~~Ai~~~   62 (64)
T 1dax_A            4 FYVDQDECIACESCVEIAPGAFAMDPEIEKAYVKDVEGASQEEVEEAMDTCPVQCIHWE   62 (64)
T ss_dssp             CEECSTTCCSCCHHHHHCTTTEEECSSSSSEEECCGGGSCHHHHHHHHHHSSSCCEECC
T ss_pred             EEEccccCCCchHHHHhCCccEeEcCCCCEEEEecCCCcchhHHHHHHHhCCHhhEeee
Confidence            4678889999999999999777765432444332210111111234 678888  5543


No 38 
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=84.99  E-value=0.48  Score=50.80  Aligned_cols=47  Identities=15%  Similarity=0.180  Sum_probs=36.7

Q ss_pred             CccccccccCCCCCCCH--HHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHhh
Q 012925           47 MDFDLYDLLGIDSSSDQ--SQIKTAYRMLQKRCHPDIAGSAGHDMAIILNEAYSV   99 (453)
Q Consensus        47 ~~~DyYevLGV~~~As~--~eIKkAYRklalk~HPDk~~~~a~~~f~~I~eAYev   99 (453)
                      ...|||.+||++.+...  .+|+++||++++..+++      .+.+..|..|+.|
T Consensus       627 ~~~~~~~~lG~~~~~~~lr~~~~~ayr~la~~~~~~------~~r~~lvd~a~~v  675 (681)
T 2pzi_A          627 NKASTNHILGFPFTSHGLRLGVEASLRSLARVAPTQ------RHRYTLVDMANKV  675 (681)
T ss_dssp             CCCSSSEETTEESSHHHHHHHHHHHHHHHHHHCSSH------HHHHHHHHHHHHH
T ss_pred             cCCCCcccCCCCCChHHHHHHHHHHHHHHHHhCCCh------HHHHHHHHHhccc
Confidence            34569999999776554  67999999999976655      3578888888876


No 39 
>1iqz_A Ferredoxin; iron-sulfer protein, ultlahigh resolution analysis, geometry of [4Fe-4S] cluster, electron transport; 0.92A {Bacillus thermoproteolyticus} SCOP: d.58.1.4 PDB: 1ir0_A 1wtf_A*
Probab=84.55  E-value=0.082  Score=41.24  Aligned_cols=31  Identities=26%  Similarity=0.522  Sum_probs=24.3

Q ss_pred             hcccceecccCcccccccCceeeeecccCcce
Q 012925          141 VFVDEVKCVGCLKCALFAGKTFAIESAYGRAR  172 (453)
Q Consensus       141 vFvDE~~CIGC~kCsl~a~~tFaie~~~GRAR  172 (453)
                      +.+|...|+||+.|...++..|.+++ .|...
T Consensus         4 v~vd~~~CigCg~C~~~CP~~~~~~~-~g~~~   34 (81)
T 1iqz_A            4 TIVDKETCIACGACGAAAPDIYDYDE-DGIAY   34 (81)
T ss_dssp             EEECTTTCCCCSHHHHHCTTTEEECT-TSCEE
T ss_pred             EEEecccCcccChhhHhCchheeeCC-CCeEE
Confidence            56888899999999999998887653 34443


No 40 
>1rof_A Ferredoxin; electron transport, iron-sulfur; NMR {Thermotoga maritima} SCOP: d.58.1.4 PDB: 1vjw_A
Probab=78.71  E-value=0.57  Score=33.44  Aligned_cols=25  Identities=32%  Similarity=0.671  Sum_probs=19.9

Q ss_pred             hcccceecccCcccccccCceeeee
Q 012925          141 VFVDEVKCVGCLKCALFAGKTFAIE  165 (453)
Q Consensus       141 vFvDE~~CIGC~kCsl~a~~tFaie  165 (453)
                      +.+|...|++|+.|...++..|.++
T Consensus         3 ~~i~~~~C~~C~~C~~~Cp~~~~~~   27 (60)
T 1rof_A            3 VRVDADACIGCGVCENLCPDVFQLG   27 (60)
T ss_dssp             SEECTTTCCSCCSSTTTCTTTBCCC
T ss_pred             EEEchhhCCCChHHHHhCcHHHeEC
Confidence            4567789999999999999765543


No 41 
>1sj1_A Ferredoxin; thermostability, iron-sulfur cluster, hexammine cobalt(III), electron transport; HET: NCO; 1.50A {Pyrococcus furiosus} SCOP: d.58.1.4 PDB: 1siz_A* 2z8q_A 3pni_A
Probab=71.20  E-value=0.47  Score=34.59  Aligned_cols=25  Identities=32%  Similarity=0.612  Sum_probs=20.7

Q ss_pred             hcccceecccCcccccccCceeeee
Q 012925          141 VFVDEVKCVGCLKCALFAGKTFAIE  165 (453)
Q Consensus       141 vFvDE~~CIGC~kCsl~a~~tFaie  165 (453)
                      +.+|...|+||+.|...++..|.++
T Consensus         4 ~~id~~~C~~C~~C~~~Cp~~~~~~   28 (66)
T 1sj1_A            4 VSVDQDTCIGDAICASLCPDVFEMN   28 (66)
T ss_dssp             EEECTTTCCCCCHHHHHCTTTEEEC
T ss_pred             EEECcccCcCchHHHHhCCceEEEC
Confidence            4678889999999999999767664


No 42 
>1f2g_A Ferredoxin II; electron transport, FDII desulfovibrio gigas; NMR {Desulfovibrio gigas} SCOP: d.58.1.4 PDB: 1fxd_A
Probab=66.82  E-value=0.92  Score=32.40  Aligned_cols=24  Identities=21%  Similarity=0.610  Sum_probs=19.3

Q ss_pred             hcccceecccCcccccccCceeeee
Q 012925          141 VFVDEVKCVGCLKCALFAGKTFAIE  165 (453)
Q Consensus       141 vFvDE~~CIGC~kCsl~a~~tFaie  165 (453)
                      +.+| ..|++|+.|...++..|.++
T Consensus         2 v~id-~~C~~C~~C~~~CP~~~~~~   25 (58)
T 1f2g_A            2 IEVN-DDCMACEACVEICPDVFEMN   25 (58)
T ss_dssp             CBCT-TTCCCCCHHHHHCTTTEEEC
T ss_pred             cEEC-CcCccchHHHHhCCccEEEC
Confidence            3567 78999999999999866554


No 43 
>1xer_A Ferredoxin; electron transport, iron-sulfur, duplication; 2.00A {Sulfolobus tokodaii str} SCOP: d.58.1.3 PDB: 2vkr_A
Probab=49.58  E-value=5.3  Score=31.83  Aligned_cols=27  Identities=22%  Similarity=0.121  Sum_probs=20.8

Q ss_pred             hhcccceecccCcccccccCc-eeeeec
Q 012925          140 AVFVDEVKCVGCLKCALFAGK-TFAIES  166 (453)
Q Consensus       140 ~vFvDE~~CIGC~kCsl~a~~-tFaie~  166 (453)
                      .+.+|...|++|+.|...++. .+.+.+
T Consensus        37 ~~~id~~~C~~Cg~C~~~CP~~ai~~~~   64 (103)
T 1xer_A           37 IVGVDFDLCIADGSCINACPVNVFQWYD   64 (103)
T ss_dssp             SEEEETTTCCCCCHHHHHCTTCCCEEEE
T ss_pred             eEEEehhhCCChhhHHHHcCccCeeccc
Confidence            356788899999999999984 555544


No 44 
>1jb0_C Photosystem I iron-sulfur center; membrane protein, multiprotein-pigment complex, photosynthes; HET: CL1 PQN BCR LHG LMG; 2.50A {Synechococcus elongatus} SCOP: d.58.1.2 PDB: 3pcq_C* 1k0t_A 2wsc_C* 2wse_C* 2wsf_C* 3lw5_C* 2o01_C*
Probab=38.17  E-value=7.5  Score=29.18  Aligned_cols=25  Identities=16%  Similarity=0.416  Sum_probs=18.7

Q ss_pred             cccceecccCcccccccCc-eeeeec
Q 012925          142 FVDEVKCVGCLKCALFAGK-TFAIES  166 (453)
Q Consensus       142 FvDE~~CIGC~kCsl~a~~-tFaie~  166 (453)
                      .+|...|++|+.|...++. .+.+++
T Consensus         4 ~~~~~~C~~Cg~C~~~CP~~a~~~~~   29 (80)
T 1jb0_C            4 VKIYDTCIGCTQCVRACPTDVLEMVP   29 (80)
T ss_dssp             EEEETTCCCCCHHHHHCTTCCCEEEE
T ss_pred             cccCCcCcChhHHHHHCCcccccccc
Confidence            4566789999999998884 555543


No 45 
>1kqf_B FDH-N beta S, formate dehydrogenase, nitrate-inducible, iron-SU subunit; oxidoreductase, selenium, selenocysteine, seCys, molybdenum; HET: MGD HEM CDL; 1.60A {Escherichia coli} SCOP: d.58.1.5 f.23.22.1 PDB: 1kqg_B*
Probab=33.14  E-value=9.2  Score=37.26  Aligned_cols=62  Identities=13%  Similarity=0.180  Sum_probs=35.4

Q ss_pred             hhcccceecccCcccccccCc-eeeeecccCcceeecccCCC--CCCCcc-ccccce--EEEeccccH
Q 012925          140 AVFVDEVKCVGCLKCALFAGK-TFAIESAYGRARVVAQWADP--EHNPGS-YRNVPS--RLIVERSDL  201 (453)
Q Consensus       140 ~vFvDE~~CIGC~kCsl~a~~-tFaie~~~GRARV~~Q~~d~--E~~iq~-IqsCPv--Is~Ver~~l  201 (453)
                      .+.+|...|++|+.|...++. .+.++...+........++.  .+.... ++.||+  |.+.++.++
T Consensus       125 ~v~id~~~CigCg~C~~~CP~~ai~~~~~~~~~~kC~~C~~r~~~g~~p~Cv~~CP~~Ai~~~~~~~~  192 (294)
T 1kqf_B          125 IVDFQSENCIGCGYCIAGCPFNIPRLNKEDNRVYKCTLCVDRVSVGQEPACVKTCPTGAIHFGTKKEM  192 (294)
T ss_dssp             CEEECGGGCCCCCHHHHHCTTCCCEEETTTTEEECCCTTHHHHTTTCCCHHHHHCTTSCEEEEEHHHH
T ss_pred             ceEeCcccCCCcchhhhcCCCCCcEecCCCCCeeeCCCccchhhcCccHHHHHhCCcCcEEEecHHHH
Confidence            356788899999999988875 33443322221111111110  111225 889999  888776665


No 46 
>3i9v_9 NADH-quinone oxidoreductase subunit 9; electron transport, respiratory chain, cell flavoprotein, FMN, iron, iron-sulfur, membrane; HET: FMN; 3.10A {Thermus thermophilus} PDB: 2ybb_8* 2fug_9* 3iam_9* 3ias_9* 3m9s_9*
Probab=29.69  E-value=25  Score=30.56  Aligned_cols=17  Identities=35%  Similarity=0.706  Sum_probs=14.4

Q ss_pred             cceecccCcccccccCc
Q 012925          144 DEVKCVGCLKCALFAGK  160 (453)
Q Consensus       144 DE~~CIGC~kCsl~a~~  160 (453)
                      |...|++|+.|...++.
T Consensus        49 d~~~Ci~C~~C~~~CP~   65 (182)
T 3i9v_9           49 GLEKCIGCSLCAAACPA   65 (182)
T ss_dssp             SCBSCCCCCHHHHHCTT
T ss_pred             CCccCcccccchhhCCc
Confidence            45689999999998874


No 47 
>1ti6_B Pyrogallol hydroxytransferase small subunit; molybdenum binding enzyme, MGD-cofactors, DMSO-reductase family, 4Fe-4S-cluster; HET: MGD BTT; 2.00A {Pelobacter acidigallici} SCOP: b.3.5.1 d.58.1.5 PDB: 1ti2_B* 1ti4_B* 1vld_N* 1vle_N* 1vlf_N*
Probab=29.65  E-value=50  Score=31.81  Aligned_cols=62  Identities=13%  Similarity=-0.015  Sum_probs=34.2

Q ss_pred             hhcccceecccCcccccccCc-eeeeecccCcceeecccCCC--C----CCCcc-ccccce--EEEeccccH
Q 012925          140 AVFVDEVKCVGCLKCALFAGK-TFAIESAYGRARVVAQWADP--E----HNPGS-YRNVPS--RLIVERSDL  201 (453)
Q Consensus       140 ~vFvDE~~CIGC~kCsl~a~~-tFaie~~~GRARV~~Q~~d~--E----~~iq~-IqsCPv--Is~Ver~~l  201 (453)
                      .+.+|...|+||+.|...++. ...++...+...-.....+.  +    +.... ++.||.  |.+.+..+.
T Consensus        91 ~v~id~~~CigC~~C~~~CP~~Ai~~~~~~~~~~kC~~C~~r~~~~~~~G~~P~Cv~~CP~~Ai~~~~~~dp  162 (274)
T 1ti6_B           91 IVLIDPEKAKGKKELLDTCPYGVMYWNEEENVAQKCTMCAHLLDDESWAPKMPRCAHNCGSFVYEFLKTTPE  162 (274)
T ss_dssp             CEEECTTTTTTCGGGGGGCSSCCCEEETTTTEEECCCTTHHHHTCTTCTTCSCHHHHHCSSCCEEEEEECHH
T ss_pred             cEEechhhccchHHHHhhCccCCeEEEcccCccccCCCchhhhhhhccCCCCcchhhhCCcCceEEcCCCcH
Confidence            356788899999999998875 22232221111000000000  0    22235 889999  888876643


No 48 
>3gyx_B Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=27.31  E-value=18  Score=32.15  Aligned_cols=55  Identities=18%  Similarity=0.282  Sum_probs=29.7

Q ss_pred             hcccceecccCc-----ccccccCc-eeeeecccCcceeecccCCCCCCCcc-ccccce--EEEec
Q 012925          141 VFVDEVKCVGCL-----KCALFAGK-TFAIESAYGRARVVAQWADPEHNPGS-YRNVPS--RLIVE  197 (453)
Q Consensus       141 vFvDE~~CIGC~-----kCsl~a~~-tFaie~~~GRARV~~Q~~d~E~~iq~-IqsCPv--Is~Ve  197 (453)
                      +++|...|++|+     .|...++. .+.+++..+  .......+.-..-.. +..||.  |.+..
T Consensus         2 v~id~~~C~gC~~c~~~~C~~~CP~~ai~~~~~~~--~~~~~d~~~C~~Cg~Cv~~CP~~Ai~~~~   65 (166)
T 3gyx_B            2 TYVDPSKCDGCKGGEKTACMYICPNDLMILDPEEM--KAFNQEPEACWECYSCIKICPQGAITARP   65 (166)
T ss_dssp             EEECTTTCCCCCSSSCCHHHHHCTTSCEEEETTTT--EEEESCGGGCCCCCHHHHHCSSCCEEECC
T ss_pred             CEEcchhcCCCCCCCcchhHHhCCccccEEecCCc--eeEecCcccCcccChHhHhCCccceEEec
Confidence            457778899998     88888775 334433211  111111111122345 777888  66654


No 49 
>1hfe_L Protein (Fe-only hydrogenase (E.C.1.18.99.1) (larger subunit)); hydrogene metabolism, periplasm; 1.60A {Desulfovibrio vulgaris subsp} SCOP: c.96.1.1 d.58.1.5 PDB: 1e08_A* 1gx7_A*
Probab=26.62  E-value=62  Score=32.97  Aligned_cols=68  Identities=24%  Similarity=0.408  Sum_probs=36.2

Q ss_pred             hhcccceecccCcccccccCceeeeecccCcceeecccCCCCCCCcc-ccccce--EEEeccccHHHHHHHHhh
Q 012925          140 AVFVDEVKCVGCLKCALFAGKTFAIESAYGRARVVAQWADPEHNPGS-YRNVPS--RLIVERSDLAALEYLMAK  210 (453)
Q Consensus       140 ~vFvDE~~CIGC~kCsl~a~~tFaie~~~GRARV~~Q~~d~E~~iq~-IqsCPv--Is~Ver~~laaLeflm~~  210 (453)
                      .+.+|...|++|+.|...++.. ++....|...... ..+.-..... +..||+  |... ......+..++..
T Consensus        27 ~i~~d~~kCi~Cg~C~~~CP~~-ai~~~~~~~~~i~-~~~~C~~Cg~C~~~CP~~Ai~~~-~~~~~~v~~~l~d   97 (421)
T 1hfe_L           27 FVQIDEAKCIGCDTCSQYCPTA-AIFGEMGEPHSIP-HIEACINCGQCLTHCPENAIYEA-QSWVPEVEKKLKD   97 (421)
T ss_dssp             SEEECTTTCCCCCHHHHHCTTC-CCBCCTTSCCBCC-CGGGCCCCCTTGGGCTTCCEEES-CCCHHHHHHHHHC
T ss_pred             eEEECcccCCCccHHHHhcCcC-ceecccccceeec-ChhhCCchhhHHHhhCcCCcccc-cccchhhhhhhcc
Confidence            3567888999999999998862 2222223211110 0111123445 889999  5541 3344344334443


No 50 
>1bc6_A 7-Fe ferredoxin; electron transport, iron-sulfur; NMR {Bacillus schlegelii} SCOP: d.58.1.2 PDB: 1bd6_A 1bqx_A 1bwe_A
Probab=23.87  E-value=80  Score=23.43  Aligned_cols=62  Identities=13%  Similarity=0.086  Sum_probs=33.5

Q ss_pred             cccceeccc--CcccccccCc-eeeeecccCcceeecccCCCCCCCcc-ccccce--EEEeccccHHHHHHHH
Q 012925          142 FVDEVKCVG--CLKCALFAGK-TFAIESAYGRARVVAQWADPEHNPGS-YRNVPS--RLIVERSDLAALEYLM  208 (453)
Q Consensus       142 FvDE~~CIG--C~kCsl~a~~-tFaie~~~GRARV~~Q~~d~E~~iq~-IqsCPv--Is~Ver~~laaLeflm  208 (453)
                      ++|...|++  |+.|...++. .+.+++  +... .  ..+.=..-.. ++.||.  |.+.....-.+++.+.
T Consensus         2 ~i~~~~C~~c~C~~C~~~Cp~~ai~~~~--~~~~-~--~~~~C~~Cg~C~~~CP~~ai~~~~~~~~~~~~~~~   69 (77)
T 1bc6_A            2 YVITEPCIGTKDASCVEVCPVDCIHEGE--DQYY-I--DPDVCIDCGACEAVCPVSAIYHEDFVPEEWKSYIQ   69 (77)
T ss_dssp             EECCSTTTTCCCCSSTTTCTTCCEEECS--SSEE-E--CTTTCCSCCSHHHHSGGGSSEETTTSCHHHHHHHH
T ss_pred             EEeCccCCCCCcchhHHhcccccEEeCC--CcEE-E--CcccCcCccCCHhhcCccceEecCCCHHHHHHHHH
Confidence            356678999  8999988875 233322  2111 1  1111122345 778998  6665433334555544


No 51 
>2vpz_B NRFC protein; oxidoreductase, molybdopterin guanine dinucleotide, iron-sulfur, metal-binding, molybdopterin; HET: MGD; 2.40A {Thermus thermophilus} PDB: 2vpx_B* 2vpw_B* 2vpy_B*
Probab=20.64  E-value=28  Score=31.69  Aligned_cols=71  Identities=17%  Similarity=0.203  Sum_probs=38.3

Q ss_pred             hhcccceecccCcccccccCc-eeeeecccCcceeecccCC--CCCCCcc-ccccce--EEEeccccH-HHHHHHHhhC
Q 012925          140 AVFVDEVKCVGCLKCALFAGK-TFAIESAYGRARVVAQWAD--PEHNPGS-YRNVPS--RLIVERSDL-AALEYLMAKQ  211 (453)
Q Consensus       140 ~vFvDE~~CIGC~kCsl~a~~-tFaie~~~GRARV~~Q~~d--~E~~iq~-IqsCPv--Is~Ver~~l-aaLeflm~~~  211 (453)
                      .+.+|...|++|+.|...++. .+.++...+ .......++  .++.... ++.||.  |.+.+..+. +.+..++...
T Consensus        82 ~~~id~~~CigC~~C~~~CP~~Ai~~~~~~~-~~kC~~C~~~~~~g~~p~Cv~~CP~~Ai~~g~~~~~~~~~~~~~~~~  159 (195)
T 2vpz_B           82 LVLVDPKKCIACGACIAACPYDARYLHPAGY-VSKCTFCAHRLEKGKVPACVETCPTYCRTFGDLEDPESPVAKALKAA  159 (195)
T ss_dssp             CEEECTTTCCCCCHHHHHCTTCCCEECTTSS-EECCCTTHHHHHTTCCCHHHHSCTTCCEEEEETTCTTSHHHHHHHHC
T ss_pred             ceeecCCCCCCcChhHhhCCCCCeEECCCCC-CccCcCcchHHhCCCCchhHhhCCcccEEEecccCchHHHHHHHhcc
Confidence            356777899999999988874 334433222 000000000  0112234 889999  777665544 3444555543


Done!