BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 012929
(453 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q6P4Y0|CDKAL_XENTR Threonylcarbamoyladenosine tRNA methylthiotransferase OS=Xenopus
tropicalis GN=cdkal1 PE=2 SV=1
Length = 553
Score = 454 bits (1169), Expect = e-127, Method: Compositional matrix adjust.
Identities = 230/426 (53%), Positives = 300/426 (70%), Gaps = 29/426 (6%)
Query: 1 MEDIEDLLAGSGGGGAPPGFRLPI--NAVGVNPKYNKNKPRLHDNHLSKTGSLSPKIPGT 58
++DIED+++ + P R N V K NKNK + + T IPGT
Sbjct: 9 LDDIEDIVSATD---PKPHDRQNARQNIVPRARKRNKNKIQEEEPPADST------IPGT 59
Query: 59 ETIYMKTFGCSHNQSDSEYMAGQLSAFGYALTDNSEEADIWLINTCTVKSPSQSAMDTLI 118
+ I+++T+GCSHN SD EYMAGQL+A+GY++T+ E+AD+WL+N+CTVKSP++ I
Sbjct: 60 QKIWIRTWGCSHNNSDGEYMAGQLAAYGYSITEQPEQADLWLLNSCTVKSPAEDHFRNSI 119
Query: 119 AKCKSAKKPLVVAGCVPQGSRDLKELEGVSIVGVQQIDRVVEVVEETLKGHEVRLLHRKK 178
K + A K +V++GCVPQ + ++G+SI+GVQQIDRVVEVVEET+KGH VRLL +KK
Sbjct: 120 KKAQEANKKVVLSGCVPQAQPRQEYMKGLSIIGVQQIDRVVEVVEETIKGHSVRLLGQKK 179
Query: 179 L-------PALDLPKVRRNKFVEILPINVGCLGACTYCKTKHARGHLGSYTVESLVGRVR 231
LDLPK+R+N +EI+ IN GCL ACTYCKTKHARG L SY VE LV R
Sbjct: 180 DNGKRLGGARLDLPKIRKNPLIEIISINTGCLNACTYCKTKHARGELASYPVEELVDRAA 239
Query: 232 TVIADGVKEVWLSSEDTGAYGRDIGVNLPILLNAIVAELPPDGSTMLRIGMTNPPFILEH 291
+GV E+WL+SEDTGAYGRDIG +LP LL +V E+ P+G+ MLR+GMTNPP+ILEH
Sbjct: 240 QSFQEGVCEIWLTSEDTGAYGRDIGTDLPTLLWKLV-EVIPEGA-MLRLGMTNPPYILEH 297
Query: 292 LKEIAEVLRHPCVYSFLHVPVQSGSDAVLSAMNREYTLSDFRTVVDTLIELVPGMQIATD 351
L+E+A++L HP VY+FLH+PVQS SD+VL M REY ++DF+ VVD L E VPG+ IATD
Sbjct: 298 LEEMAKILNHPRVYAFLHIPVQSASDSVLMDMKREYCIADFKRVVDFLKERVPGITIATD 357
Query: 352 IICGFPGETDEDFNQTVNLIKEYKFPQVHISQFYPRPGIQFLNLDS---------TELLS 402
IICGFPGETDEDF +T+ L++EYKFP + I+QFYPRPG ++ T+ LS
Sbjct: 358 IICGFPGETDEDFKETLKLVEEYKFPSLFINQFYPRPGTPAAKMEQVPAHVKKQRTKELS 417
Query: 403 LLFSNY 408
LF +Y
Sbjct: 418 QLFHSY 423
>sp|Q6NS26|CDKAL_XENLA Threonylcarbamoyladenosine tRNA methylthiotransferase OS=Xenopus
laevis GN=cdkal1 PE=2 SV=1
Length = 556
Score = 453 bits (1166), Expect = e-126, Method: Compositional matrix adjust.
Identities = 230/426 (53%), Positives = 298/426 (69%), Gaps = 29/426 (6%)
Query: 1 MEDIEDLLAGSGGGGAPPGFRLPI--NAVGVNPKYNKNKPRLHDNHLSKTGSLSPKIPGT 58
++DIED+++ + P R N V K NKN + + T IPGT
Sbjct: 9 LDDIEDMVSATD---PKPHDRQSARKNIVPRARKRNKNNIQEEEPPADST------IPGT 59
Query: 59 ETIYMKTFGCSHNQSDSEYMAGQLSAFGYALTDNSEEADIWLINTCTVKSPSQSAMDTLI 118
+ I+++T+GCSHN SD EYMAGQL+A+GY++T+ E+AD+WL+N+CTVKSP++ I
Sbjct: 60 QKIWIRTWGCSHNNSDGEYMAGQLAAYGYSITEQPEKADLWLLNSCTVKSPAEDHFRNSI 119
Query: 119 AKCKSAKKPLVVAGCVPQGSRDLKELEGVSIVGVQQIDRVVEVVEETLKGHEVRLLHRKK 178
K + A K +VV+GCVPQ ++G+SI+GVQQIDRVVEVVEET+KGH VRLL +KK
Sbjct: 120 KKAQEANKKVVVSGCVPQAQPRQDYMKGLSIIGVQQIDRVVEVVEETIKGHSVRLLGQKK 179
Query: 179 L-------PALDLPKVRRNKFVEILPINVGCLGACTYCKTKHARGHLGSYTVESLVGRVR 231
LDLPK+R+N +EI+ IN GCL ACTYCKTKHARG L SY VE LV R
Sbjct: 180 DNGKRLGGARLDLPKIRKNPLIEIISINTGCLNACTYCKTKHARGELASYPVEELVDRAT 239
Query: 232 TVIADGVKEVWLSSEDTGAYGRDIGVNLPILLNAIVAELPPDGSTMLRIGMTNPPFILEH 291
+GV E+WL+SEDTGAYGRDIG +LP LL +V E+ P+G+ MLR+GMTNPP+ILEH
Sbjct: 240 QSFQEGVCEIWLTSEDTGAYGRDIGTDLPTLLWKLV-EVIPEGA-MLRLGMTNPPYILEH 297
Query: 292 LKEIAEVLRHPCVYSFLHVPVQSGSDAVLSAMNREYTLSDFRTVVDTLIELVPGMQIATD 351
L+E+A++L HP VY+FLH+PVQS SD+VL M REY ++DF+ VVD L E VPG+ IATD
Sbjct: 298 LEEMAKILNHPRVYAFLHIPVQSASDSVLMDMKREYCIADFKRVVDFLKERVPGITIATD 357
Query: 352 IICGFPGETDEDFNQTVNLIKEYKFPQVHISQFYPRPGIQFLNLDS---------TELLS 402
IICGFPGETDEDF +T+ L++EYKFP + I+QFYPRPG ++ T+ LS
Sbjct: 358 IICGFPGETDEDFKETLKLVEEYKFPSLFINQFYPRPGTPAAKMEQVLAHVKKRRTKELS 417
Query: 403 LLFSNY 408
LF +Y
Sbjct: 418 QLFHSY 423
>sp|Q5VV42|CDKAL_HUMAN Threonylcarbamoyladenosine tRNA methylthiotransferase OS=Homo
sapiens GN=CDKAL1 PE=1 SV=1
Length = 579
Score = 449 bits (1155), Expect = e-125, Method: Compositional matrix adjust.
Identities = 222/424 (52%), Positives = 297/424 (70%), Gaps = 22/424 (5%)
Query: 1 MEDIEDLLAGSGGGGAPPGFRLPINAVGVNPKYNKNKPRLHDNHLSKTGSLSPKIPGTET 60
++DIED+++ + P R + V PK + + + + IPG +
Sbjct: 10 LDDIEDIVSQED---SKPQDRHFVRK-DVVPKVRRRNTQKYLQEEENSPPSDSTIPGIQK 65
Query: 61 IYMKTFGCSHNQSDSEYMAGQLSAFGYALTDNSEEADIWLINTCTVKSPSQSAMDTLIAK 120
I+++T+GCSHN SD EYMAGQL+A+GY +T+N+ +AD+WL+N+CTVK+P++ I K
Sbjct: 66 IWIRTWGCSHNNSDGEYMAGQLAAYGYKITENASDADLWLLNSCTVKNPAEDHFRNSIKK 125
Query: 121 CKSAKKPLVVAGCVPQGSRDLKELEGVSIVGVQQIDRVVEVVEETLKGHEVRLLHRKKL- 179
+ K +V+AGCVPQ L+G+SI+GVQQIDRVVEVVEET+KGH VRLL +KK
Sbjct: 126 AQEENKKIVLAGCVPQAQPRQDYLKGLSIIGVQQIDRVVEVVEETIKGHSVRLLGQKKDN 185
Query: 180 ------PALDLPKVRRNKFVEILPINVGCLGACTYCKTKHARGHLGSYTVESLVGRVRTV 233
LDLPK+R+N +EI+ IN GCL ACTYCKTKHARG+L SY ++ LV R +
Sbjct: 186 GRRLGGARLDLPKIRKNPLIEIISINTGCLNACTYCKTKHARGNLASYPIDELVDRAKQS 245
Query: 234 IADGVKEVWLSSEDTGAYGRDIGVNLPILLNAIVAELPPDGSTMLRIGMTNPPFILEHLK 293
+GV E+WL+SEDTGAYGRDIG NLP LL +V E+ P+G+ MLR+GMTNPP+ILEHL+
Sbjct: 246 FQEGVCEIWLTSEDTGAYGRDIGTNLPTLLWKLV-EVIPEGA-MLRLGMTNPPYILEHLE 303
Query: 294 EIAEVLRHPCVYSFLHVPVQSGSDAVLSAMNREYTLSDFRTVVDTLIELVPGMQIATDII 353
E+A++L HP VY+FLH+PVQS SD+VL M REY ++DF+ VVD L E VPG+ IATDII
Sbjct: 304 EMAKILNHPRVYAFLHIPVQSASDSVLMEMKREYCVADFKRVVDFLKEKVPGITIATDII 363
Query: 354 CGFPGETDEDFNQTVNLIKEYKFPQVHISQFYPRPGIQFLNLDS---------TELLSLL 404
CGFPGETD+DF +TV L++EYKFP + I+QFYPRPG ++ T+ LS +
Sbjct: 364 CGFPGETDQDFQETVKLVEEYKFPSLFINQFYPRPGTPAAKMEQVPAQVKKQRTKDLSRV 423
Query: 405 FSNY 408
F +Y
Sbjct: 424 FHSY 427
>sp|Q91WE6|CDKAL_MOUSE Threonylcarbamoyladenosine tRNA methylthiotransferase OS=Mus
musculus GN=Cdkal1 PE=2 SV=1
Length = 578
Score = 445 bits (1144), Expect = e-124, Method: Compositional matrix adjust.
Identities = 207/342 (60%), Positives = 267/342 (78%), Gaps = 9/342 (2%)
Query: 55 IPGTETIYMKTFGCSHNQSDSEYMAGQLSAFGYALTDNSEEADIWLINTCTVKSPSQSAM 114
IPG + I+++T+GCSHN SD EYMAGQL+A+GY +T+N+ +AD+WL+N+CTVK+P++
Sbjct: 59 IPGIQKIWIRTWGCSHNNSDGEYMAGQLAAYGYKITENASDADLWLLNSCTVKNPAEDHF 118
Query: 115 DTLIAKCKSAKKPLVVAGCVPQGSRDLKELEGVSIVGVQQIDRVVEVVEETLKGHEVRLL 174
I K + K +V+AGCVPQ L+G+SI+GVQQIDRVVEVVEET+KGH VRLL
Sbjct: 119 RNSIKKAQEENKKVVLAGCVPQAQPRQDYLKGLSIIGVQQIDRVVEVVEETIKGHSVRLL 178
Query: 175 HRKKL-------PALDLPKVRRNKFVEILPINVGCLGACTYCKTKHARGHLGSYTVESLV 227
+KK LDLPK+R+N +EI+ IN GCL ACTYCKTKHARG+L SY ++ LV
Sbjct: 179 GQKKDNGKRLGGARLDLPKIRKNPLIEIISINTGCLNACTYCKTKHARGNLASYPIDELV 238
Query: 228 GRVRTVIADGVKEVWLSSEDTGAYGRDIGVNLPILLNAIVAELPPDGSTMLRIGMTNPPF 287
R + +GV E+WL+SEDTGAYGRDIG +LP LL +V E+ P+G+ MLR+GMTNPP+
Sbjct: 239 ERAKQSFQEGVCEIWLTSEDTGAYGRDIGTDLPTLLWKLV-EVIPEGA-MLRLGMTNPPY 296
Query: 288 ILEHLKEIAEVLRHPCVYSFLHVPVQSGSDAVLSAMNREYTLSDFRTVVDTLIELVPGMQ 347
ILEHL+E+A++L HP VY+FLH+PVQS SD+VL M REY ++DF+ VVD L E VPG+
Sbjct: 297 ILEHLEEMAKILNHPRVYAFLHIPVQSASDSVLMDMKREYCVADFKRVVDFLKEKVPGIT 356
Query: 348 IATDIICGFPGETDEDFNQTVNLIKEYKFPQVHISQFYPRPG 389
IATDIICGFPGETD+DF +TV L++EYKFP + I+QFYPRPG
Sbjct: 357 IATDIICGFPGETDQDFQETVKLVEEYKFPSLFINQFYPRPG 398
>sp|Q6PG34|CDKAL_DANRE Threonylcarbamoyladenosine tRNA methylthiotransferase OS=Danio
rerio GN=cdkal1 PE=2 SV=1
Length = 547
Score = 439 bits (1129), Expect = e-122, Method: Compositional matrix adjust.
Identities = 211/389 (54%), Positives = 272/389 (69%), Gaps = 18/389 (4%)
Query: 37 KPRLHDNHLSKTGSLSPKIPGTETIYMKTFGCSHNQSDSEYMAGQLSAFGYALTDNSEEA 96
+ R H + IPG + +++KT+GCSHN SD EYMAGQL+ GY +T++S +A
Sbjct: 37 RARKHKQETGEQMQTDSVIPGMQKVWLKTWGCSHNSSDGEYMAGQLAVAGYQITEDSSDA 96
Query: 97 DIWLINTCTVKSPSQSAMDTLIAKCKSAKKPLVVAGCVPQGSRDLKELEGVSIVGVQQID 156
D+WL+N+CTVKSP++ I K + K +V+AGCVPQ + ++ +SI+GVQQID
Sbjct: 97 DLWLLNSCTVKSPAEDHFRNAIRKAQEQNKKVVLAGCVPQAQPRMDYIKDLSIIGVQQID 156
Query: 157 RVVEVVEETLKGHEVRLLHRKKLPA-------LDLPKVRRNKFVEILPINVGCLGACTYC 209
RVVEVV+E +KGH VRLL +KK LDLPK+R+N +EI+ IN GCL ACTYC
Sbjct: 157 RVVEVVDEAIKGHSVRLLGQKKEKGKRLGGARLDLPKIRKNPLIEIISINTGCLNACTYC 216
Query: 210 KTKHARGHLGSYTVESLVGRVRTVIADGVKEVWLSSEDTGAYGRDIGVNLPILLNAIVAE 269
KTKHARG L SY VE LV RVR +GV E+WL+SEDTGAYGRDIG +LP LL +V E
Sbjct: 217 KTKHARGDLASYPVEELVERVRQSFQEGVCEIWLTSEDTGAYGRDIGSDLPTLLWRLVEE 276
Query: 270 LPPDGSTMLRIGMTNPPFILEHLKEIAEVLRHPCVYSFLHVPVQSGSDAVLSAMNREYTL 329
+P MLR+GMTNPP+ILEHL+E++ +L+HP V+SFLHVP+QS SD+VL M REY
Sbjct: 277 IPE--GAMLRLGMTNPPYILEHLEEMSRILQHPRVFSFLHVPLQSASDSVLMEMRREYCC 334
Query: 330 SDFRTVVDTLIELVPGMQIATDIICGFPGETDEDFNQTVNLIKEYKFPQVHISQFYPRPG 389
+DF +VD L E VPG+ IATDIICGFPGETDEDF QT+ L++ Y+FP + I+QFYPRPG
Sbjct: 335 ADFTHLVDYLKERVPGITIATDIICGFPGETDEDFEQTLALVRRYRFPSLFINQFYPRPG 394
Query: 390 I---------QFLNLDSTELLSLLFSNYK 409
+ T+ LS LF +Y+
Sbjct: 395 TPAALMQQLPAHVKKQRTKELSALFHSYR 423
>sp|Q7K4W1|CDKAL_DROME Threonylcarbamoyladenosine tRNA methylthiotransferase OS=Drosophila
melanogaster GN=CG6550 PE=2 SV=1
Length = 552
Score = 425 bits (1092), Expect = e-118, Method: Compositional matrix adjust.
Identities = 222/416 (53%), Positives = 280/416 (67%), Gaps = 40/416 (9%)
Query: 35 KNKPRLHDNHLSKTGSLSPKIPGTETIYMKTFGCSHNQSDSEYMAGQLSAFGYALTDNSE 94
K KP +H++ IPGT+ +++KT+GC+HN SDSEYMAGQL+A+GY L+ E
Sbjct: 57 KPKPTIHES----------VIPGTQKVFVKTWGCAHNNSDSEYMAGQLAAYGYRLS-GKE 105
Query: 95 EADIWLINTCTVKSPSQSAMDTLIAKCKSAKKPLVVAGCVPQGSRDLKELEGVSIVGVQQ 154
EAD+WL+N+CTVK+PS+ I K +VVAGCVPQG+ L G+S++GVQQ
Sbjct: 106 EADLWLLNSCTVKNPSEDTFRNEIESGMRNGKHVVVAGCVPQGAPKSDYLNGLSVIGVQQ 165
Query: 155 IDRVVEVVEETLKGHEVRLLHRKKL--------PALDLPKVRRNKFVEILPINVGCLGAC 206
IDRVVEVVEETLKGH V+LL KK L LPKVR+N +EI+ IN GCL C
Sbjct: 166 IDRVVEVVEETLKGHSVQLLQNKKKVHGRRVAGAPLSLPKVRKNPLIEIISINSGCLNQC 225
Query: 207 TYCKTKHARGHLGSYTVESLVGRVRTVIADGVKEVWLSSEDTGAYGRDIGVNLPILLNAI 266
TYCKTKHARG L SY E +V R R A+G E+WL+SEDTGAYGRDIG +LP LL +
Sbjct: 226 TYCKTKHARGDLASYPPEEVVERARQSFAEGCCEIWLTSEDTGAYGRDIGSSLPELLWQL 285
Query: 267 VAELPPDGSTMLRIGMTNPPFILEHLKEIAEVLRHPCVYSFLHVPVQSGSDAVLSAMNRE 326
V +P MLR+GMTNPP+ILEHL+E+A VL+HP VYSFLHVPVQSGSD+VL M RE
Sbjct: 286 VEVIPE--HCMLRVGMTNPPYILEHLEEVANVLQHPRVYSFLHVPVQSGSDSVLGEMKRE 343
Query: 327 YTLSDFRTVVDTLIELVPGMQIATDIICGFPGETDEDFNQTVNLIKEYKFPQVHISQFYP 386
Y DF VVD L E VPG+ IATDIICGFP ET++DF +T+ L +Y+FP + I+QF+P
Sbjct: 344 YCRQDFEHVVDFLRERVPGVTIATDIICGFPTETEDDFEETMTLCAKYRFPSLFINQFFP 403
Query: 387 RPGIQFLNLD---------STELLSLLFSNYK---------FTVMLISIL-VKLHY 423
RPG +D T+ L+ LF +Y+ +TV++ + KLHY
Sbjct: 404 RPGTPAAKMDRIPANLVKKRTKRLTDLFYSYEPYADRVGEIYTVLVTEVSHDKLHY 459
>sp|Q291H5|CDKAL_DROPS Threonylcarbamoyladenosine tRNA methylthiotransferase OS=Drosophila
pseudoobscura pseudoobscura GN=GA19679 PE=3 SV=1
Length = 553
Score = 410 bits (1055), Expect = e-114, Method: Compositional matrix adjust.
Identities = 219/395 (55%), Positives = 275/395 (69%), Gaps = 29/395 (7%)
Query: 55 IPGTETIYMKTFGCSHNQSDSEYMAGQLSAFGYALTDNSEEADIWLINTCTVKSPSQSAM 114
IPGT+ +++KT+GC+HN SDSEYMAGQL+A+GY L+ +EAD+WL+N+CTVK+PS+
Sbjct: 68 IPGTQKVFVKTWGCAHNNSDSEYMAGQLAAYGYKLS-GKDEADLWLLNSCTVKNPSEDTF 126
Query: 115 DTLIAKCKSAKKPLVVAGCVPQGSRDLKELEGVSIVGVQQIDRVVEVVEETLKGHEVRLL 174
I S K +VVAGCVPQG+ L G+S++GVQQIDRVVEVVEETLKGH VRLL
Sbjct: 127 RNEIESGMSNGKHIVVAGCVPQGAPKSDYLRGLSVIGVQQIDRVVEVVEETLKGHSVRLL 186
Query: 175 HRKKL-------PALDLPKVRRNKFVEILPINVGCLGACTYCKTKHARGHLGSYTVESLV 227
KK+ L LPKVR+N +EI+ IN GCL CTYCKTKHARG L SY E +V
Sbjct: 187 QNKKVHGRRVAGAPLSLPKVRKNPLIEIISINTGCLNQCTYCKTKHARGDLASYPPEEIV 246
Query: 228 GRVRTVIADGVKEVWLSSEDTGAYGRDIGVNLPILLNAIVAELPPDGSTMLRIGMTNPPF 287
R R A+G E+WL+SEDTGAYGRDIG +LP LL +V +P MLR+GMTNPP+
Sbjct: 247 DRARQSFAEGCCEIWLTSEDTGAYGRDIGSSLPELLWKLVEVIPE--HCMLRVGMTNPPY 304
Query: 288 ILEHLKEIAEVLRHPCVYSFLHVPVQSGSDAVLSAMNREYTLSDFRTVVDTLIELVPGMQ 347
ILEHL+E+A+VL+HP VY+FLHVPVQSGSD+VL M REY DF VVD L E VPG+
Sbjct: 305 ILEHLEEVAKVLQHPRVYAFLHVPVQSGSDSVLGEMKREYCRKDFEHVVDFLRERVPGVT 364
Query: 348 IATDIICGFPGETDEDFNQTVNLIKEYKFPQVHISQFYPRPGIQFLNLD---------ST 398
IATDIICGFP ET+EDF +T+ L Y+FP + I+QF+PRPG ++ T
Sbjct: 365 IATDIICGFPTETEEDFEETMTLCGRYRFPSLFINQFFPRPGTPAAKMERIPANLVKKRT 424
Query: 399 ELLSLLFSNYK---------FTVMLISIL-VKLHY 423
+ L+ LF +Y+ +TV++ I KLHY
Sbjct: 425 KRLTDLFYSYEPYAQRVGEMYTVLVTEISHDKLHY 459
>sp|Q8MXQ7|CDKAL_CAEEL Threonylcarbamoyladenosine tRNA methylthiotransferase
OS=Caenorhabditis elegans GN=Y92H12BL.1 PE=3 SV=2
Length = 425
Score = 303 bits (776), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 156/290 (53%), Positives = 207/290 (71%), Gaps = 13/290 (4%)
Query: 130 VAGCVPQGSRDLKELEGVSIVGVQQIDRVVEVVEETLKGHEVRLLHRKKLPA-LDLPKVR 188
+AGCV Q + L+ VSIVGV+QIDR+VEVV ETLKG++VRLL R + A L LPK+R
Sbjct: 1 MAGCVSQAAPSEPWLQNVSIVGVKQIDRIVEVVGETLKGNKVRLLTRNRPDAVLSLPKMR 60
Query: 189 RNKFVEILPINVGCLGACTYCKTKHARGHLGSYTVESLVGRVRTVIAD-GVKEVWLSSED 247
+N+ +E+L I+ GCL CTYCKTK ARG L SY + LV + R D GVKE+WL+SED
Sbjct: 61 KNELIEVLSISTGCLNNCTYCKTKMARGDLVSYPLADLVEQARAAFHDEGVKELWLTSED 120
Query: 248 TGAYGRDIGVNLPILLNAIVAELPPDGSTMLRIGMTNPPFILEHLKEIAEVLRHPCVYSF 307
GA+GRDIG+ LP LL +V ++ PDGS M+R+GMTNPP+IL+HL+EIAE+L HP VY+F
Sbjct: 121 LGAWGRDIGLVLPDLLRELV-KVIPDGS-MMRLGMTNPPYILDHLEEIAEILNHPKVYAF 178
Query: 308 LHVPVQSGSDAVLSAMNREYTLSDFRTVVDTLIELVPGMQIATDIICGFPGETDEDFNQT 367
LH+PVQS SDAVL+ M REY+ F + D +I VP + IATD+I FP ET EDF ++
Sbjct: 179 LHIPVQSASDAVLNDMKREYSRRHFEQIADYMIANVPNIYIATDMILAFPTETLEDFEES 238
Query: 368 VNLIKEYKFPQVHISQFYPR---PGIQFLNLDSTE------LLSLLFSNY 408
+ L+++YKFP + I+Q+YPR P + +D+ E +S LF +Y
Sbjct: 239 MELVRKYKFPSLFINQYYPRSGTPAARLKKIDTVEARKRTAAMSELFRSY 288
>sp|O59545|AMTAB_PYRHO Probable threonylcarbamoyladenosine tRNA methylthiotransferase
OS=Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428
/ JCM 9974 / NBRC 100139 / OT-3) GN=PH1875 PE=3 SV=2
Length = 425
Score = 267 bits (683), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 131/332 (39%), Positives = 204/332 (61%), Gaps = 6/332 (1%)
Query: 61 IYMKTFGCSHNQSDSEYMAGQLSAFGYALTDNSEEADIWLINTCTVKSPSQSAMDTLIAK 120
+Y++ +GC+ N++D E MA L G+ + ++ EE++I ++N+C VK P++ + I +
Sbjct: 4 VYIENYGCARNRADGEIMAALLYLSGHEIVESPEESEIVVVNSCAVKDPTERKIARRIRE 63
Query: 121 CKSAKKPLVVAGCVPQGSRDLKELEGVSIVGVQQIDRVVEVVEETLKGHE---VRLLHRK 177
K ++V GC+P + D+ + +I+GV+ IDR+V+ VE ++G + V ++
Sbjct: 64 LLDNGKKVIVTGCLPHVNPDVIDERVSAILGVKSIDRIVQAVEYAMRGEKLISVPDWKKR 123
Query: 178 KLPALDLPKVRRNKFVEILPINVGCLGACTYCKTKHARGHLGSYTVESLVGRVRTVIADG 237
L LD P++ ILPI GCL ACTYC T+ ARG L SY+ E ++G V+ I G
Sbjct: 124 NLDKLDFPRLSPRNVYFILPIAEGCLNACTYCATRLARGVLKSYSPEKIIGWVKWAIKQG 183
Query: 238 VKEVWLSSEDTGAYGRDIGVNLPILLNAIVAELPPDGSTMLRIGMTNPPFILEHLKEIAE 297
KE+WLS+EDTG YG DIG NL L++ I A +G +R+GM NP +L+ L E+ +
Sbjct: 184 YKEIWLSAEDTGCYGFDIGTNLAKLIDEITA---IEGEFRIRVGMMNPNHVLKFLDELID 240
Query: 298 VLRHPCVYSFLHVPVQSGSDAVLSAMNREYTLSDFRTVVDTLIELVPGMQIATDIICGFP 357
+ VY FLH+PVQSG + +L M R YT+ +F +V P + + TDII GFP
Sbjct: 241 AYKDEKVYKFLHLPVQSGDNEILRKMGRMYTVEEFEEIVKAFRREFPELNLHTDIIVGFP 300
Query: 358 GETDEDFNQTVNLIKEYKFPQVHISQFYPRPG 389
GE++E F ++V LIK + +V++S++ PRPG
Sbjct: 301 GESEEAFQRSVELIKRIRPDKVNVSRYSPRPG 332
>sp|Q9UXX9|AMTAB_PYRAB Probable threonylcarbamoyladenosine tRNA methylthiotransferase
OS=Pyrococcus abyssi (strain GE5 / Orsay) GN=PYRAB17290
PE=3 SV=1
Length = 425
Score = 267 bits (682), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 132/332 (39%), Positives = 202/332 (60%), Gaps = 6/332 (1%)
Query: 61 IYMKTFGCSHNQSDSEYMAGQLSAFGYALTDNSEEADIWLINTCTVKSPSQSAMDTLIAK 120
IY++ +GC+ N++D E MA L G+ + + +E +I ++N+C VK P++ + I +
Sbjct: 4 IYIENYGCARNRADGEIMAALLHLAGHEIVYDPDEGEIVVVNSCAVKDPTERKIARRIKE 63
Query: 121 CKSAKKPLVVAGCVPQGSRDLKELEGVSIVGVQQIDRVVEVVEETLKGHE---VRLLHRK 177
+ K ++V GC+P + D+ + I+GV+ IDR+++ VE L+G + V ++
Sbjct: 64 LLDSGKKVIVTGCLPHVNPDVIDERVSGILGVKSIDRIIQAVEYALRGEKLISVPDWRKR 123
Query: 178 KLPALDLPKVRRNKFVEILPINVGCLGACTYCKTKHARGHLGSYTVESLVGRVRTVIADG 237
L LD P++ I+PI GCL ACTYC T+ ARG L SY+ E +VG V+ I G
Sbjct: 124 NLDKLDFPRLSPRTVYFIVPIAEGCLNACTYCATRFARGVLKSYSPEKIVGWVKWAIKQG 183
Query: 238 VKEVWLSSEDTGAYGRDIGVNLPILLNAIVAELPPDGSTMLRIGMTNPPFILEHLKEIAE 297
KE+WLS+EDTG YG DIG NL LL+ I A +G +R+GM NP +L+ L E+ E
Sbjct: 184 YKEIWLSAEDTGCYGFDIGTNLAKLLDEITA---IEGEFRVRVGMMNPNHVLKFLDELIE 240
Query: 298 VLRHPCVYSFLHVPVQSGSDAVLSAMNREYTLSDFRTVVDTLIELVPGMQIATDIICGFP 357
+ +Y FLH+PVQSG + +L M R YT+ +F +V + P + + TDII GFP
Sbjct: 241 AYQDEKIYKFLHLPVQSGDNDILRRMGRNYTVEEFEEIVKEFRKKFPDLNLHTDIIVGFP 300
Query: 358 GETDEDFNQTVNLIKEYKFPQVHISQFYPRPG 389
GE DE F ++V LI+ + +V++S++ PRPG
Sbjct: 301 GEDDEAFQRSVELIRRIRPDKVNVSRYSPRPG 332
>sp|O26914|AMTAB_METTH Probable threonylcarbamoyladenosine tRNA methylthiotransferase
OS=Methanothermobacter thermautotrophicus (strain ATCC
29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H)
GN=MTH_826 PE=3 SV=1
Length = 424
Score = 235 bits (599), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 132/349 (37%), Positives = 204/349 (58%), Gaps = 12/349 (3%)
Query: 61 IYMKTFGCSHNQSDSEYMAGQLSAFGYALTDNSEEADIWLINTCTVKSPSQSAMDTLIAK 120
+Y++TFGC+ NQ+DSE MAG L G LT ++AD+ +INTC VK P++ + I K
Sbjct: 6 VYIETFGCTFNQADSEIMAGVLREEGAVLT-GIDDADVIIINTCYVKHPTEHKVINRIKK 64
Query: 121 CKSA--KKPLVVAGCVPQGSRDLKELEGVS----IVGVQQIDRVVEVVEETLKGHEVRLL 174
+ +K LVVAGC+ + D +LE +S +G Q+ R + V G R+
Sbjct: 65 IQETYPEKGLVVAGCMVE--IDPSKLEAISGDASWLGPHQLRRAPQAVRAASNGLVERIT 122
Query: 175 HRKKLPALDLPKVRRNKFVEILPINVGCLGACTYCKTKHARGHLGSYTVESLVGRVRTVI 234
+ +P+VR N + I+PI GC G+C+YC T+ ARG + SY + ++ R +
Sbjct: 123 GFTSDVKVKVPRVRSNPLIHIIPICEGCNGSCSYCCTRFARGRIQSYPSDLIISEAREAV 182
Query: 235 ADGVKEVWLSSEDTGAYGRDIGVNLPILLNAIVAELPPDGSTMLRIGMTNPPFILEHLKE 294
A G +E+ L+++DT AYG D G L ++ I + +P G+ +R+GM +P +L L
Sbjct: 183 ASGCREIQLTAQDTAAYGVDTGEKLSDIIKGI-SGIP--GNFRIRVGMMHPASVLRDLDG 239
Query: 295 IAEVLRHPCVYSFLHVPVQSGSDAVLSAMNREYTLSDFRTVVDTLIELVPGMQIATDIIC 354
+ E + VYSFLH+PVQSGSD+VL+ M R +T+ +FR +V+ +P + IATDII
Sbjct: 240 LVEAFKSEKVYSFLHLPVQSGSDSVLADMERGHTVDEFRMIVERFRSEIPDISIATDIIV 299
Query: 355 GFPGETDEDFNQTVNLIKEYKFPQVHISQFYPRPGIQFLNLDSTELLSL 403
G+P E EDF T +L++E K +H+S++ RP + +LD + L
Sbjct: 300 GYPTEEREDFMDTCSLLEEVKPSFIHLSKYRHRPRARSSSLDEIDFREL 348
>sp|Q58277|AMTAB_METJA Probable threonylcarbamoyladenosine tRNA methylthiotransferase
OS=Methanocaldococcus jannaschii (strain ATCC 43067 /
DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN=MJ0867
PE=3 SV=1
Length = 427
Score = 197 bits (502), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 111/338 (32%), Positives = 187/338 (55%), Gaps = 17/338 (5%)
Query: 61 IYMKTFGCSHNQSDSEYMAGQLSAFGYALTDNSEEADIWLINTCTVKSPSQSAMDTLIAK 120
+Y++ +GC N +D+E + L G+ + +N EEADI +INTC V+ +++ M I +
Sbjct: 14 VYVEGYGCVLNTADTEIIKNSLKKHGFEVVNNLEEADIAIINTCVVRLETENRMIYRINE 73
Query: 121 CKSAKKPLVVAGCVPQGSRDLKELEGVSIVGVQQIDRVVEVVEETLKGHEVRLLHRKKLP 180
K+ K +VVAGC+P+ ++ +++G + ++ + E+++ ++ H +R
Sbjct: 74 LKNLGKEVVVAGCLPKALKN--KVKGFLHIYPREAHKAGEILKNYVEKH-----YRMPYI 126
Query: 181 ALDLPKVRRNKF-------VEILPINVGCLGACTYCKTKHARGHLGSYTVESLVGRVRTV 233
D+ K K + LPI GC+G C+YC K ARG L SY E +V + + +
Sbjct: 127 EEDINKTLYKKLDYLKPSLITPLPICEGCIGNCSYCIVKIARGGLISYPREKIVNKAKEL 186
Query: 234 IADGVKEVWLSSEDTGAYGRDIGVNLPILLNAIVAELPPDGSTMLRIGMTNPPFILEHLK 293
I G K + ++++DT YG DIG NL LLN + G ++R+GM + L
Sbjct: 187 INKGAKCLLITAQDTACYGFDIGDNLANLLNELT---QIKGEFIMRVGMMHAKNAELILD 243
Query: 294 EIAEVLRHPCVYSFLHVPVQSGSDAVLSAMNREYTLSDFRTVVDTLIELVPGMQIATDII 353
E+ EV ++ V FLH+P+QSG D +L M R YT+ +F+ +V+ + + TDII
Sbjct: 244 ELIEVYQNEKVGKFLHLPLQSGDDEILKRMKRGYTVDEFKDIVNEFRRKIKNLCFTTDII 303
Query: 354 CGFPGETDEDFNQTVNLIKEYKFPQVHISQFYPRPGIQ 391
GFPGET+E F T+ +++E K +H +++ R G +
Sbjct: 304 VGFPGETEEQFQNTLEVLRELKPDYIHGAKYSQRKGTE 341
>sp|B2V930|MIAB_SULSY (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB
OS=Sulfurihydrogenibium sp. (strain YO3AOP1) GN=miaB
PE=3 SV=1
Length = 437
Score = 194 bits (492), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 127/352 (36%), Positives = 195/352 (55%), Gaps = 20/352 (5%)
Query: 62 YMKTFGCSHNQSDSEYMAGQLSAFGYALTDNSEEADIWLINTCTVKSPSQSAMDTLIAKC 121
Y+KTFGC N +DSE MAG L GY T+N EEAD+ L+NTC+V+ + + + +
Sbjct: 4 YIKTFGCQMNVNDSEKMAGILQTLGYTPTENWEEADVILVNTCSVREKPDQKVLSALGEF 63
Query: 122 KSAKKP-----LVVAGCVPQ--GSRDLKELEGVSIV-GVQQIDRVVEVVEETLKGHE-VR 172
K KK + V GC+ Q G ++ + IV G I + ++EE G++ +
Sbjct: 64 KKVKKHNPNAVIGVCGCLAQRAGYEIYQKAPFIDIVFGTTNIHHLPNLLEEAKSGNKAIE 123
Query: 173 LLHR--KKLPALD-LPKVRRNKFVEILPINVGCLGACTYCKTKHARGHLGSYTVESLVGR 229
+L + LD P VR NK+ + + GC CTYC RG S + ++
Sbjct: 124 ILEEIDENENLLDQFPTVRENKYTAFVTVIRGCDKKCTYCIVPTTRGRERSRRIGDILRE 183
Query: 230 VRTVIADGVKEVWLSSEDTGAYGRDIG-VNLPILLNAIVAELPPDGSTMLRIGMTNPPFI 288
V+ ++ DGVKE+ L ++ AYG+D G V LL A VAE+ DG +R +P +
Sbjct: 184 VQYLVEDGVKEIHLIGQNVTAYGKDFGDVKFWELLKA-VAEV--DGVERIRFTTGHPRDL 240
Query: 289 LEH-LKEIAEVLRHPCVYSFLHVPVQSGSDAVLSAMNREYTLSDFRTVVDTLIELVPGMQ 347
E +K +A++ P + LH+P+Q+GSD +L AM+R YT ++ ++ L + +P +
Sbjct: 241 DEDTIKVMADL---PQICEALHLPIQAGSDRILQAMDRGYTQKEYLQKIELLKKYIPNIA 297
Query: 348 IATDIICGFPGETDEDFNQTVNLIKEYKFPQVHISQFYPRPGIQFLNLDSTE 399
++TDII GFPGET ED+ +TV +IKE ++ QV ++ PRPG +L TE
Sbjct: 298 LSTDIIVGFPGETYEDYLETVKVIKEVEYDQVFAFKYSPRPGTPAADLPMTE 349
>sp|Q7NE65|MIAB_GLOVI (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB
OS=Gloeobacter violaceus (strain PCC 7421) GN=miaB PE=3
SV=1
Length = 441
Score = 189 bits (481), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 117/344 (34%), Positives = 184/344 (53%), Gaps = 17/344 (4%)
Query: 56 PGTETIYMKTFGCSHNQSDSEYMAGQLSAFGYALTDNSEEADIWLINTCTVKSPSQSAMD 115
P +T + TFGC N++DSE MAG L+ GY + D S+ AD+ L NTCT++ ++ +
Sbjct: 7 PQGKTACLVTFGCQMNKADSERMAGALTHLGYRIVDESDTADLVLFNTCTIRDNAEQKVY 66
Query: 116 TLIAKCKSAKK-----PLVVAGCVPQ--GSRDLKELEGVSIV-GVQQIDRVVEVVEETLK 167
+ + + K+ LV+AGCV Q G + L+ + + +V G Q ++R+ +++E +
Sbjct: 67 SYLGQQARRKQRDPHITLVLAGCVAQQEGEKLLRRVPELDLVMGPQHVNRLSDLLERVAE 126
Query: 168 GHEVRLLHRKKLPAL-DLPKVRRNKFVEILP-INVGCLGACTYCKTKHARGHLGSYTVES 225
G +V + + + L D+ K RR+ V I GC CTYC RG S T E+
Sbjct: 127 GEQV--VATEPIEILEDITKPRRDSAVTAWANIIYGCNEGCTYCIVPSVRGREQSRTPEA 184
Query: 226 LVGRVRTVIADGVKEVWLSSEDTGAYGRDIGVNLPILLNAIVAELPPDGSTMLRIGMTNP 285
+ + + A G KEV L ++ AYGRDIG NL LL + P G LR ++P
Sbjct: 185 IKAEICELGASGYKEVTLLGQNIDAYGRDIGTNLASLLR-FIHNAP--GIERLRFATSHP 241
Query: 286 PFILEHLKEIAEVLRHPCVYSFLHVPVQSGSDAVLSAMNREYTLSDFRTVVDTLIELVPG 345
+ + L IA P V H+P QSG + VL M R YT +R +++ + ++P
Sbjct: 242 RYFSDEL--IATCAELPKVCEHFHIPFQSGDNEVLRRMARGYTHEKYRAIIEKIRAILPD 299
Query: 346 MQIATDIICGFPGETDEDFNQTVNLIKEYKFPQVHISQFYPRPG 389
I+ D+I GFPGET+ F ++ L+ E +F ++ + + PRPG
Sbjct: 300 AAISADLIVGFPGETEAQFENSLRLVDELEFDALNTAAYSPRPG 343
>sp|O29021|AMTAB_ARCFU Probable threonylcarbamoyladenosine tRNA methylthiotransferase
OS=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 /
DSM 4304 / JCM 9628 / NBRC 100126) GN=AF_1247 PE=3 SV=2
Length = 424
Score = 189 bits (481), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 115/334 (34%), Positives = 188/334 (56%), Gaps = 13/334 (3%)
Query: 61 IYMKTFGCSHNQSDSEYMAGQLSAFGYALTDNSEEADIWLINTCTVKSPSQSAMDTLIAK 120
+ ++T+GC+ NQ+DS+ M G LS G + E+A++ +IN+C V ++ + +
Sbjct: 3 VAIETYGCTTNQADSDIMRGFLS--GEFELSSVEDAEVVIINSCGVIDFTERKIIRRMLD 60
Query: 121 CKSAKKPLVVAGCVPQGSRDLKELEGVSIVGVQQIDRVVEVVEETLKGH----EVRLLHR 176
K K +V+AGC+ + S++ + S + +D VV+ V L G E R + +
Sbjct: 61 LKREGKKVVLAGCLTRISKEALSVAD-SALSPDNLDMVVDAVYSALNGRKLFTERRFIDK 119
Query: 177 KKLPALDLPKVRRNKFVEILPINVGCLGACTYCKTKHARGHLGSYTVESLVGRVRTVIAD 236
+ L ++R N + I+ I+ GCLG C++C TK ARG L S++++++V +
Sbjct: 120 AEFSHLKC-RLRENA-IAIVSISEGCLGKCSFCATKFARGRLRSFSMDAIVREAERAVRA 177
Query: 237 GVKEVWLSSEDTGAYGRDIG-VNLPILLNAIVAELPPDGSTMLRIGMTNPPFILEHLKEI 295
G +E+ L+S+DTGAYG D G LP LL I +E+ +G +R+GM NP + L E+
Sbjct: 178 GYREIQLTSQDTGAYGMDKGRAMLPELLRKI-SEI--EGEFRVRVGMMNPQHAVRMLDEL 234
Query: 296 AEVLRHPCVYSFLHVPVQSGSDAVLSAMNREYTLSDFRTVVDTLIELVPGMQIATDIICG 355
+Y FLH+PVQSG + +L M R +T+ D+ VV+ + I+TDII G
Sbjct: 235 INAYSSEKIYKFLHIPVQSGDNRILEDMKRNHTVEDYVEVVEAFRNSFDDVLISTDIIVG 294
Query: 356 FPGETDEDFNQTVNLIKEYKFPQVHISQFYPRPG 389
FP ET+E F ++ LIKE + V+I+++ R G
Sbjct: 295 FPTETEEAFWKSYELIKETRPDIVNITRYSARKG 328
>sp|B7IFC4|MIAB_THEAB (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB
OS=Thermosipho africanus (strain TCF52B) GN=miaB PE=3
SV=1
Length = 429
Score = 184 bits (467), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 112/339 (33%), Positives = 187/339 (55%), Gaps = 23/339 (6%)
Query: 62 YMKTFGCSHNQSDSEYMAGQLSAFGYALTDNSEEADIWLINTCTVKSPSQSAMDTLIAKC 121
++KT+GC N++DSE L GY +N EADI ++NTC V+ ++ + I +
Sbjct: 4 FIKTYGCQMNENDSEVARYYLEQEGYESAENENEADIVILNTCVVRKKAEDKFLSTIGEL 63
Query: 122 KSAKKPLVVAGCVPQGSRDLKE---LEGVS-IVGVQQIDRVVEVVEETLKGHEVRLLHRK 177
+ K + V GC G+ LKE GV+ ++G + I R+ E VE ++KG + +
Sbjct: 64 RKKNKKIGVMGC---GAEKLKEDLFKRGVNFVIGTRAISRIPEAVELSIKGKKAAIFD-D 119
Query: 178 KLPALDLPKV--RRNKFVEILPINVGCLGACTYCKTKHARGHLGSYTVESLVGRVRTVIA 235
KL +D + R +K + I GC CTYC + RG S ++ ++ V+ +
Sbjct: 120 KLDEIDYRNILKRNSKHHAWITIIYGCNRFCTYCIVPYTRGREKSRKMDDILREVKNLSL 179
Query: 236 DGVKEVWLSSEDTGAYGRDI--GVNLPILLNAIVAELPPDGSTMLRIG-MTNPP--FILE 290
+GV+E+ ++ AYG+D+ G +L LLN + RI +T+ P F L+
Sbjct: 180 NGVREITYLGQNVDAYGKDLNDGTSLAKLLNE-----TKKIENIERIWFLTSYPTDFSLD 234
Query: 291 HLKEIAEVLRHPCVYSFLHVPVQSGSDAVLSAMNREYTLSDFRTVVDTLIELVPGMQIAT 350
+EIA + + +H+PVQ GS+ +L MNR YT+ ++ ++ ++ E+VP I++
Sbjct: 235 IAREIASSEK---IAKSIHLPVQHGSNKILKKMNRRYTIEEYYELIKSIREIVPDASISS 291
Query: 351 DIICGFPGETDEDFNQTVNLIKEYKFPQVHISQFYPRPG 389
DII GFP ET++DF QTV L++E KF +++++ + PR G
Sbjct: 292 DIIVGFPDETEDDFQQTVKLVEEIKFERLNLAIYSPREG 330
>sp|B1L8F3|MIAB_THESQ (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB
OS=Thermotoga sp. (strain RQ2) GN=miaB PE=3 SV=1
Length = 443
Score = 184 bits (466), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 115/341 (33%), Positives = 186/341 (54%), Gaps = 21/341 (6%)
Query: 61 IYMKTFGCSHNQSDSEYMAGQLSAFGYALTDNSEEADIWLINTCTVKSPSQSAMDTLIA- 119
Y+KTFGC N++DSE MAG L G+ EEAD+ +INTC V+ S+ + +
Sbjct: 3 FYIKTFGCQMNENDSETMAGLLMKEGFTPASAPEEADVVIINTCAVRRKSEEKAYSELGQ 62
Query: 120 --KCKSAKKPLV-VAGCVPQGSRD-LKELEGVSIVGVQQIDRVVEVVEETLKGHEVRLLH 175
K K +K +V VAGCV + R+ L E ++G + + +V E V+ L+G +V L
Sbjct: 63 MLKIKRKRKLVVGVAGCVAEKEREKLLERGADFVLGTRAVLKVTEAVKRALQGEKVALFE 122
Query: 176 RKKLPALD-----LPKVRRNKFVEILPINVGCLGACTYCKTKHARGHLGSYTVESLVGRV 230
LD LP++R +K + I GC CTYC + RG S +E ++ V
Sbjct: 123 ----DHLDEYTHELPRIRSSKHHAWVTIIFGCDRFCTYCIVPYTRGREKSRPMEDILEEV 178
Query: 231 RTVIADGVKEVWLSSEDTGAYGRDI--GVNLPILLNAIVAELPPDGSTMLRIGMTNPPFI 288
R + G +EV ++ AYG+D+ G +L LL +G + + P
Sbjct: 179 RELAKQGYREVTFLGQNVDAYGKDLKDGSSLAKLLEEAS---KIEGIERIWFLTSYPTDF 235
Query: 289 LEHLKEIAEVLRHPCVYSFLHVPVQSGSDAVLSAMNREYTLSDFRTVVDTLIELVPGMQI 348
+ L E+ + R+P V +H+PVQSGS+ +L MNR YT ++ +++ + VP + I
Sbjct: 236 SDELIEV--IARNPKVAKSVHLPVQSGSNRILKLMNRSYTKEEYLALLERIRSKVPDVAI 293
Query: 349 ATDIICGFPGETDEDFNQTVNLIKEYKFPQVHISQFYPRPG 389
++DII GFP ET+EDF +T++L+++ +F +++++ + PR G
Sbjct: 294 SSDIIVGFPTETEEDFMETIDLVEKAQFERLNLAIYSPRKG 334
>sp|A5IJD4|MIAB_THEP1 (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB
OS=Thermotoga petrophila (strain RKU-1 / ATCC BAA-488 /
DSM 13995) GN=miaB PE=3 SV=1
Length = 443
Score = 184 bits (466), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 115/341 (33%), Positives = 186/341 (54%), Gaps = 21/341 (6%)
Query: 61 IYMKTFGCSHNQSDSEYMAGQLSAFGYALTDNSEEADIWLINTCTVKSPSQSAMDTLIA- 119
Y+KTFGC N++DSE MAG L G+ EEAD+ +INTC V+ S+ + +
Sbjct: 3 FYIKTFGCQMNENDSETMAGLLMKEGFTPASAPEEADVVIINTCAVRRKSEEKAYSELGQ 62
Query: 120 --KCKSAKKPLV-VAGCVPQGSRD-LKELEGVSIVGVQQIDRVVEVVEETLKGHEVRLLH 175
K K +K +V VAGCV + R+ L E ++G + + +V E V+ L+G +V L
Sbjct: 63 MLKIKRKRKLVVGVAGCVAEKEREKLLERGADFVLGTRAVLKVTEAVKRALQGEKVALFE 122
Query: 176 RKKLPALD-----LPKVRRNKFVEILPINVGCLGACTYCKTKHARGHLGSYTVESLVGRV 230
LD LP++R +K + I GC CTYC + RG S +E ++ V
Sbjct: 123 ----DHLDEYTHELPRIRSSKHHAWVTIIFGCDRFCTYCIVPYTRGREKSRPMEDILEEV 178
Query: 231 RTVIADGVKEVWLSSEDTGAYGRDI--GVNLPILLNAIVAELPPDGSTMLRIGMTNPPFI 288
R + G +EV ++ AYG+D+ G +L LL +G + + P
Sbjct: 179 RELAKQGYREVTFLGQNVDAYGKDLKDGSSLAKLLEEAS---KIEGIERIWFLTSYPTDF 235
Query: 289 LEHLKEIAEVLRHPCVYSFLHVPVQSGSDAVLSAMNREYTLSDFRTVVDTLIELVPGMQI 348
+ L E+ + R+P V +H+PVQSGS+ +L MNR YT ++ +++ + VP + I
Sbjct: 236 SDELIEV--IARNPKVAKSVHLPVQSGSNRILKLMNRSYTKEEYLALLERIRSKVPDVAI 293
Query: 349 ATDIICGFPGETDEDFNQTVNLIKEYKFPQVHISQFYPRPG 389
++DII GFP ET+EDF +T++L+++ +F +++++ + PR G
Sbjct: 294 SSDIIVGFPTETEEDFMETIDLVEKAQFERLNLAIYSPRKG 334
>sp|A6LJ47|MIAB_THEM4 (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB
OS=Thermosipho melanesiensis (strain BI429 / DSM 12029)
GN=miaB PE=3 SV=1
Length = 430
Score = 182 bits (461), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 108/337 (32%), Positives = 183/337 (54%), Gaps = 17/337 (5%)
Query: 61 IYMKTFGCSHNQSDSEYMAGQLSAFGYALTDNSEEADIWLINTCTVKSPSQSAMDTLIAK 120
I++KT+GC N++DSE L GY +T+N +ADI ++NTC V+ S+ + I +
Sbjct: 4 IHIKTYGCQMNENDSEVAKFYLEEEGYEITNNENDADIVILNTCVVRKKSEDKFYSHIGE 63
Query: 121 CKSAKKPLVVAGCVPQGSRDLKELEGVS-IVGVQQIDRVVEVVEETLKGHEVRLLHRKKL 179
K K + + GC + ++ GV ++G + I + + VE + G + + K+
Sbjct: 64 LKKQNKIIGIMGCGAEKEKEKLFKRGVKFVIGTRAIPLIPQAVERAINGKKSAIFE-DKM 122
Query: 180 PALDLPKV--RRNKFVEILPINVGCLGACTYCKTKHARGHLGSYTVESLVGRVRTVIADG 237
+D K+ R +K + I GC CTYC + RG S ++ ++ V + G
Sbjct: 123 DEIDYKKILKRNSKHHAWITIIYGCNRFCTYCIVPYTRGREKSRKMDDIINEVENLAKSG 182
Query: 238 VKEVWLSSEDTGAYGRDI--GVNLPILLNAIVAELPPDGSTMLRIG-MTNPP--FILEHL 292
+KEV ++ AYG+D+ G +L LLN L D + RI +T+ P F L+
Sbjct: 183 IKEVTYLGQNVDAYGKDLNDGSSLAKLLN-----LTKDIEEIERIWFLTSYPTDFSLDIA 237
Query: 293 KEIAEVLRHPCVYSFLHVPVQSGSDAVLSAMNREYTLSDFRTVVDTLIELVPGMQIATDI 352
E+A + + +H+PVQ GS+ +L MNR YT+ ++ +++ + ++VP I++DI
Sbjct: 238 HEVANSSK---ITKNIHLPVQHGSNKILKKMNRRYTIEEYIELINDIRKIVPDASISSDI 294
Query: 353 ICGFPGETDEDFNQTVNLIKEYKFPQVHISQFYPRPG 389
I GFP ET+EDF +TV L+K KF +++++ + PR G
Sbjct: 295 IVGFPDETEEDFEKTVELVKNIKFERLNLAIYSPREG 331
>sp|Q2JQX6|MIAB_SYNJA (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB
OS=Synechococcus sp. (strain JA-3-3Ab) GN=miaB PE=3 SV=1
Length = 453
Score = 177 bits (450), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 114/342 (33%), Positives = 181/342 (52%), Gaps = 19/342 (5%)
Query: 60 TIYMKTFGCSHNQSDSEYMAGQLSAFGYALTDNSEEADIWLINTCTVKSPSQSAMDTLIA 119
T Y TFGC N++DSE MAG L + GY ++ +AD+ L NTCT++ ++ + + +
Sbjct: 5 TYYTITFGCQMNRADSERMAGILESLGYVPAEDELQADLVLFNTCTIRDNAEQKVYSYLG 64
Query: 120 -----KCKSAKKPLVVAGCVPQ--GSRDLKELEGVSIV-GVQQIDRVVEVVEETLKGHEV 171
K K+ L+VAGCV Q G R L+ + + +V G Q ++R+ +++ + G++V
Sbjct: 65 IQAQRKRKNPAIKLIVAGCVAQQEGERLLRRVPELDLVMGPQYVNRLGDLLAQVEAGNQV 124
Query: 172 RLLHRKKLPALDLPKVRRNKFVEILPINV--GCLGACTYCKTKHARGHLGSYTVESLVGR 229
++P D+ K RR+ V INV GC CTYC RG S +++
Sbjct: 125 VATEPVEIPE-DITKPRRDSRVTAW-INVIYGCNERCTYCIVPLVRGREQSRQPQAIRAE 182
Query: 230 VRTVIADGVKEVWLSSEDTGAYGRDIG--VNLPILLNAIVAELPPDGSTMLRIGMTNPPF 287
+ V G +EV L ++ AYGRD+ NL LL + + +G +R ++P +
Sbjct: 183 IEDVARAGYREVTLLGQNIDAYGRDLDPKTNLASLLRFVHS---VEGIERIRFATSHPRY 239
Query: 288 ILEHLKEIAEVLRHPCVYSFLHVPVQSGSDAVLSAMNREYTLSDFRTVVDTLIELVPGMQ 347
E L IA P V H+P Q+GSDAVL M R YT +R ++ + + +P
Sbjct: 240 FTEEL--IATCAELPKVCEHFHIPFQAGSDAVLKRMRRGYTQERYRQLIQLIRQYMPEAT 297
Query: 348 IATDIICGFPGETDEDFNQTVNLIKEYKFPQVHISQFYPRPG 389
I+ D I GFPGET+ F +T+ L+++ F ++ + + PRPG
Sbjct: 298 ISADAIVGFPGETEAQFQETLQLVQDIGFDFLNTAAYSPRPG 339
>sp|A9BGV7|MIAB_PETMO (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB
OS=Petrotoga mobilis (strain DSM 10674 / SJ95) GN=miaB
PE=3 SV=1
Length = 439
Score = 177 bits (449), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 108/338 (31%), Positives = 174/338 (51%), Gaps = 11/338 (3%)
Query: 61 IYMKTFGCSHNQSDSEYMAGQLSAFGYALTDNSEEADIWLINTCTVKSPSQSAMDTLIA- 119
Y++TFGC N ++SE MAG L G+ T+N +EADI LIN+C V+ +++ M I
Sbjct: 3 FYIRTFGCQMNINESEIMAGLLKEEGFEWTENPKEADIILINSCAVREKAENKMYGAIGG 62
Query: 120 --KCKSAKKPLV--VAGCVPQGSRD--LKELEGVSIV-GVQQIDRVVEVVEETLKGHEVR 172
K K K L+ V GC + R+ L+ + + V G + + + +V+ L G
Sbjct: 63 YGKLKDENKNLILGVGGCSAEKERENLLERFKNIDFVFGTRNVVDIGNLVKRALNGKRFA 122
Query: 173 LLHRK-KLPALDLPKVRRNKFVEILPINVGCLGACTYCKTKHARGHLGSYTVESLVGRVR 231
K D+PK+ +K + I GC C+YC + RG S +E ++ V
Sbjct: 123 DFSDKLNDVNYDIPKMPISKHHAWITIIYGCNKYCSYCIVPYTRGFEKSRPMEDIIREVE 182
Query: 232 TVIADGVKEVWLSSEDTGAYGRDIGVNLPILLNAIVAELPPDGSTMLRIGMTNPPFILEH 291
+ G KE+ ++ +YG+D G L I D + + P I +
Sbjct: 183 SYAKKGYKEITFLGQNVDSYGKDFGDKKSKLDLLIQKAAEFDSIKRIWFLTSYPSDITDS 242
Query: 292 LKEIAEVLRHPCVYSFLHVPVQSGSDAVLSAMNREYTLSDFRTVVDTLIELVPGMQIATD 351
L I V ++ H+P QSGS+ +L AMNR+YT +F +V+ + + V + +++D
Sbjct: 243 L--IQTVANEEKAANYFHLPAQSGSNKILKAMNRKYTREEFIELVNKVKKEVANVTVSSD 300
Query: 352 IICGFPGETDEDFNQTVNLIKEYKFPQVHISQFYPRPG 389
I GFP ETDEDF +TV+LIK+ +F +++I+++ PR G
Sbjct: 301 FITGFPSETDEDFEETVDLIKQCRFERINIAEYSPREG 338
>sp|Q2JKY0|MIAB_SYNJB (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB
OS=Synechococcus sp. (strain JA-2-3B'a(2-13)) GN=miaB
PE=3 SV=1
Length = 444
Score = 177 bits (449), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 112/342 (32%), Positives = 181/342 (52%), Gaps = 19/342 (5%)
Query: 60 TIYMKTFGCSHNQSDSEYMAGQLSAFGYALTDNSEEADIWLINTCTVKSPSQSAMDTLIA 119
T Y TFGC N++D+E MAG L + GY T++ +AD+ L NTCT++ ++ + + +
Sbjct: 5 TYYTITFGCQMNRADTERMAGILESLGYVATEDELQADLVLYNTCTIRDNAEQKVYSYLG 64
Query: 120 -----KCKSAKKPLVVAGCVPQ--GSRDLKELEGVSIV-GVQQIDRVVEVVEETLKGHEV 171
K K+ L+VAGCV Q G + L+ + + +V G Q ++R+ +++ + G++V
Sbjct: 65 IQAQRKRKNPAIKLIVAGCVAQQEGEKLLRRVPELDLVMGPQYVNRLGDLLAQVEAGNQV 124
Query: 172 RLLHRKKLPALDLPKVRRNKFVEILPINV--GCLGACTYCKTKHARGHLGSYTVESLVGR 229
++P D+ K RR+ V INV GC CTYC RG S +++
Sbjct: 125 VATDPVEIPE-DITKPRRDSQVTAW-INVIYGCNERCTYCIVPRVRGQEQSRQPQAIRAE 182
Query: 230 VRTVIADGVKEVWLSSEDTGAYGRDIG--VNLPILLNAIVAELPPDGSTMLRIGMTNPPF 287
+ V G +EV L ++ AYGRD+ NL LL + + +G +R ++P +
Sbjct: 183 IEDVARAGYREVTLLGQNIDAYGRDLDPKTNLASLLRFVHS---VEGIERIRFATSHPRY 239
Query: 288 ILEHLKEIAEVLRHPCVYSFLHVPVQSGSDAVLSAMNREYTLSDFRTVVDTLIELVPGMQ 347
E L I P V H+P Q+GS+ VL M R YT +R ++ + + +P
Sbjct: 240 FTEEL--ITTCAELPKVCEHFHIPFQAGSNEVLKRMRRGYTHERYRQIIQLIRQYMPEAA 297
Query: 348 IATDIICGFPGETDEDFNQTVNLIKEYKFPQVHISQFYPRPG 389
I+ D I GFPGET+ F +T+ L+++ F QV+ + + PRPG
Sbjct: 298 ISADAIVGFPGETEAQFQETLQLVQDIGFDQVNTAAYSPRPG 339
>sp|Q9WZT7|MTAB_THEMA Threonylcarbamoyladenosine tRNA methylthiotransferase MtaB
OS=Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM
3109 / JCM 10099) GN=mtaB PE=3 SV=1
Length = 434
Score = 177 bits (449), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 110/336 (32%), Positives = 180/336 (53%), Gaps = 12/336 (3%)
Query: 59 ETIYMKTFGCSHNQSDSEYMAGQLSAFGYALTDNSEEADIWLINTCTVKSPSQSAMDTLI 118
+T+ ++TFGC NQ +SEYMA QL GY + + A +++N+C V + + LI
Sbjct: 2 KTVRIETFGCKVNQYESEYMAEQLEKAGYVVLPDGNAA-YYIVNSCAVTKEVEKKVKRLI 60
Query: 119 AKCKSAKK--PLVVAGCVPQGSRD-LKELEGVSIVGVQQIDRVVEVVEETLKGHEVRLLH 175
++ K +++ GC Q S D K L ++G+ + +V+ + +L G + ++
Sbjct: 61 KSIRNRNKNAKIILTGCFAQLSPDEAKNLPVDMVLGIDEKKHIVDHIN-SLNGKQQVVVS 119
Query: 176 RKKLPALDLPKVR-RNKFVEILPINVGCLGACTYCKTKHARG-HLGSYTVESLVGRVRTV 233
P + K ++ + + GC CTYC + ARG + S +E +
Sbjct: 120 EPGRPVYEKVKGSFEDRTRSYIKVEDGCDNTCTYCAIRLARGTRIRSKPLEIFKEEFAEM 179
Query: 234 IADGVKEVWLSSEDTGAYGRDIGVNLPILLNAIVAELPPDGSTMLRIGMTNPPFILEHLK 293
+ G KE+ ++ + G YG+D+G +L LL ++ ++P G +R+ N + + +
Sbjct: 180 VMKGYKEIVITGVNLGKYGKDMGSSLAELLK-VIEKVP--GDYRVRLSSINVEDVNDEI- 235
Query: 294 EIAEVLRHPCVYSFLHVPVQSGSDAVLSAMNREYTLSDFRTVVDTLIELVPGMQIATDII 353
+ R+P + LH+ VQSGSD VL M R+Y +SDF VVD L + P I TDII
Sbjct: 236 -VKAFKRNPRLCPHLHISVQSGSDDVLKRMGRKYKISDFMRVVDKLRSIDPDFSITTDII 294
Query: 354 CGFPGETDEDFNQTVNLIKEYKFPQVHISQFYPRPG 389
GFPGETD DF +T+ L+++ +F +VHI +F PRPG
Sbjct: 295 VGFPGETDADFQRTLELVEKVEFSRVHIFRFSPRPG 330
>sp|P73127|MIAB_SYNY3 (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB
OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=miaB
PE=3 SV=1
Length = 451
Score = 175 bits (444), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 111/341 (32%), Positives = 179/341 (52%), Gaps = 20/341 (5%)
Query: 65 TFGCSHNQSDSEYMAGQLSAFGYALTDNSEEADIWLINTCTVKSPSQSAMDTLIAKCKSA 124
TFGC N++DSE MAG L G TD+ +AD+ L NTC+++ ++ + + + +
Sbjct: 12 TFGCQMNKADSERMAGILENLGMTYTDDPNQADLVLYNTCSIRDNAEQKVYSYLGRQAKR 71
Query: 125 KK-----PLVVAGCVPQ--GSRDLKELEGVSIV-GVQQIDRVVEVVEETLKGHEVRLLHR 176
K+ LVVAGCV Q G + L+ + + +V G Q +R+ +++E+ G +V +
Sbjct: 72 KQVEPELTLVVAGCVAQQEGEQLLRRVPELDLVMGPQHANRLDQLLEQVWAGSQV--VAT 129
Query: 177 KKLPAL-DLPKVRRNKFVEI-LPINVGCLGACTYCKTKHARGHLGSYTVESLVGRVRTVI 234
+ L + D+ K RR V + I GC C+YC + RG S T E++ G + +
Sbjct: 130 ESLHIMEDITKPRRESTVSAWVNIIYGCNERCSYCVVPNVRGVEQSRTPEAIYGEMEVLA 189
Query: 235 ADGVKEVWLSSEDTGAYGRDI------GVNLPILLNAIVAELPPDGSTMLRIGMTNPPFI 288
G KEV L ++ AYGRD+ G +L L + + +G LR ++P +
Sbjct: 190 QQGFKEVTLLGQNIDAYGRDLPGTTPSGRHLHTLTDLLYHVHDIEGIDRLRFATSHPRYF 249
Query: 289 LEHLKEIAEVLRHPCVYSFLHVPVQSGSDAVLSAMNREYTLSDFRTVVDTLIELVPGMQI 348
E L + + L P V H+P QSG + +L AM R YT + +++ + +P I
Sbjct: 250 TERLIQACQEL--PKVCEHFHIPFQSGDNDILKAMKRGYTREKYLQIIEKIRRYMPDAAI 307
Query: 349 ATDIICGFPGETDEDFNQTVNLIKEYKFPQVHISQFYPRPG 389
+ D+I GFPGET+ F T+NLI+E F ++ + + PRPG
Sbjct: 308 SADVIVGFPGETEAQFENTLNLIEEVGFDLLNTAAYSPRPG 348
>sp|O66638|MIAB_AQUAE (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB OS=Aquifex
aeolicus (strain VF5) GN=miaB PE=3 SV=1
Length = 440
Score = 175 bits (443), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 110/346 (31%), Positives = 191/346 (55%), Gaps = 19/346 (5%)
Query: 58 TETIYMKTFGCSHNQSDSEYMAGQLSAFGYALTDNSEEADIWLINTCTVKS-PSQSAMDT 116
++ ++KTFGC N +DSE + G L GY TDN EEAD+ ++NTCT++ P Q +
Sbjct: 2 SKKFFIKTFGCQMNFNDSERIRGLLKTIGYEQTDNWEEADLIILNTCTIREKPDQKVLSH 61
Query: 117 L----IAKCKSAKKPLVVAGCVPQ--GSRDLKELEGVSIVGVQ-QIDRVVEVVEETLKGH 169
L K K+ K + VAGC+ Q G +K+ + I+ + ++ E++ + G+
Sbjct: 62 LGEYKKIKEKNPKALIAVAGCLAQRTGWELVKKAPVIDIMFSSFNMHQLPELINQAQAGY 121
Query: 170 E----VRLLHRKKLPALDLPKVRRNKFVEILPINVGCLGACTYCKTKHARGHLGSYTVES 225
+ + L + + + P R NK+ + I GC CTYC RG S + S
Sbjct: 122 KAIAILDELPQDEDKIWEYPVERDNKYCAYVTIIKGCDKNCTYCVVPRTRGKERSRALHS 181
Query: 226 LVGRVRTVIADGVKEVWLSSEDTGAYGRDIGVNLPILLNAIVAELPP-DGSTMLRIGMTN 284
++ V+ ++ DGV+E+ L ++ A+G+D PI + ++ ++ DG +R +
Sbjct: 182 ILDEVKRLVDDGVREIHLLGQNVTAWGKDF--EKPIPFSELLYQVSKIDGVERIRFTTGH 239
Query: 285 PPFILEHLKE-IAEVLRHPCVYSFLHVPVQSGSDAVLSAMNREYTLSDFRTVVDTLIELV 343
P + + + E +A++ P V + LH+P Q+GS+ +L+ M+R YT ++ ++ L E V
Sbjct: 240 PRDLTDDIIEAMADI---PQVCNALHLPFQAGSNRILALMDRGYTKEEYLEKIEKLKEKV 296
Query: 344 PGMQIATDIICGFPGETDEDFNQTVNLIKEYKFPQVHISQFYPRPG 389
+ ++TD+I GFP ET+EDF T++++K+ +F QV +F PRPG
Sbjct: 297 KDIAMSTDVIVGFPTETEEDFEHTLDVLKKVRFEQVFSFKFSPRPG 342
>sp|A2CB74|MIAB_PROM3 (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB
OS=Prochlorococcus marinus (strain MIT 9303) GN=miaB
PE=3 SV=1
Length = 480
Score = 175 bits (443), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 114/345 (33%), Positives = 177/345 (51%), Gaps = 20/345 (5%)
Query: 60 TIYMKTFGCSHNQSDSEYMAGQLSAFGYALTDNSEEADIWLINTCTVKSPSQSAMDTLIA 119
+ +++TFGC N++DSE MAG L A GY EAD+ L NTCT++ ++ + + +
Sbjct: 30 SFWIQTFGCQMNKADSERMAGILEAMGYHEAPAELEADLVLYNTCTIRDNAEQKVYSYLG 89
Query: 120 KCKSAKK-----PLVVAGCVPQ--GSRDLKELEGVSIV-GVQQIDRVVEVVEETLKGHEV 171
+ K+ LVVAGCV Q G L+ + + +V G Q +R+ ++ + G +V
Sbjct: 90 RQARRKRTHPHLKLVVAGCVAQQEGEALLRRIPELDLVMGPQHANRLEALLTQVDNGQQV 149
Query: 172 RLLHRKKLPALDLPKVRRNKFVEILPINV--GCLGACTYCKTKHARGHLGSYTVESLVGR 229
+ DL RR+ + +NV GC CTYC RG S + E++
Sbjct: 150 VATDDNHILE-DLTTARRDSTI-CAWVNVIYGCNERCTYCVVPSVRGKEQSRSPEAIRLE 207
Query: 230 VRTVIADGVKEVWLSSEDTGAYGRDI------GVNLPILLNAIVAELPPDGSTMLRIGMT 283
+ + A G +E+ L ++ AYGRD+ G L + + +G +R +
Sbjct: 208 IEGLAARGFREITLLGQNIDAYGRDLPGITPEGRRQNTLTDLLHHIHDVEGIERIRFATS 267
Query: 284 NPPFILEHLKEIAEVLRHPCVYSFLHVPVQSGSDAVLSAMNREYTLSDFRTVVDTLIELV 343
+P + E L E L P V H+P QSG + VL AM R YT+ +R +V+ + EL+
Sbjct: 268 HPRYFTERLIEACFDL--PKVCEHFHIPFQSGDNDVLKAMARGYTVERYRRIVNRIRELM 325
Query: 344 PGMQIATDIICGFPGETDEDFNQTVNLIKEYKFPQVHISQFYPRP 388
P I+TD+I FPGETD F T+NL++E F QV+ + + PRP
Sbjct: 326 PDAAISTDVIVAFPGETDAQFQNTLNLVEEVGFDQVNTAAYSPRP 370
>sp|Q7V8L8|MIAB_PROMM (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB
OS=Prochlorococcus marinus (strain MIT 9313) GN=miaB
PE=3 SV=1
Length = 480
Score = 174 bits (442), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 114/345 (33%), Positives = 177/345 (51%), Gaps = 20/345 (5%)
Query: 60 TIYMKTFGCSHNQSDSEYMAGQLSAFGYALTDNSEEADIWLINTCTVKSPSQSAMDTLIA 119
+ +++TFGC N++DSE MAG L A GY EAD+ L NTCT++ ++ + + +
Sbjct: 30 SFWIQTFGCQMNKADSERMAGILEAMGYHEAPAELEADLVLYNTCTIRDNAEQKVYSYLG 89
Query: 120 KCKSAKK-----PLVVAGCVPQ--GSRDLKELEGVSIV-GVQQIDRVVEVVEETLKGHEV 171
+ K+ LVVAGCV Q G L+ + + +V G Q +R+ ++ + G +V
Sbjct: 90 RQARRKRTHPHLKLVVAGCVAQQEGEALLRRIPELDLVMGPQHANRLEALLTQVDNGQQV 149
Query: 172 RLLHRKKLPALDLPKVRRNKFVEILPINV--GCLGACTYCKTKHARGHLGSYTVESLVGR 229
+ DL RR+ + +NV GC CTYC RG S + E++
Sbjct: 150 VATDDNHILE-DLTTARRDSTI-CAWVNVIYGCNERCTYCVVPSVRGKEQSRSPEAIRLE 207
Query: 230 VRTVIADGVKEVWLSSEDTGAYGRDI------GVNLPILLNAIVAELPPDGSTMLRIGMT 283
+ + A G +E+ L ++ AYGRD+ G L + + +G +R +
Sbjct: 208 IEGLAARGFREITLLGQNIDAYGRDLPGITPEGRRQNTLTDLLHHIHDVEGIERIRFATS 267
Query: 284 NPPFILEHLKEIAEVLRHPCVYSFLHVPVQSGSDAVLSAMNREYTLSDFRTVVDTLIELV 343
+P + E L E L P V H+P QSG + VL AM R YT+ +R +V+ + EL+
Sbjct: 268 HPRYFTERLIEACFDL--PKVCEHFHIPFQSGDNDVLKAMARGYTVERYRRIVNRIRELM 325
Query: 344 PGMQIATDIICGFPGETDEDFNQTVNLIKEYKFPQVHISQFYPRP 388
P I+TD+I FPGETD F T+NL++E F QV+ + + PRP
Sbjct: 326 PDAAISTDVIVAFPGETDAQFQNTLNLLEEVGFDQVNTAAYSPRP 370
>sp|B7K993|MIAB_CYAP7 (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB
OS=Cyanothece sp. (strain PCC 7424) GN=miaB PE=3 SV=1
Length = 454
Score = 174 bits (442), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 114/346 (32%), Positives = 183/346 (52%), Gaps = 24/346 (6%)
Query: 62 YMKTFGCSHNQSDSEYMAGQLSAFGYALTDNSEEADIWLINTCTVKSPSQSAMDTLIAKC 121
++ TFGC N++DSE MAG L GY +D+ EAD+ L NTCT++ ++ + + + +
Sbjct: 9 HITTFGCQMNKADSERMAGILEDIGYQWSDDPNEADLVLYNTCTIRDNAEQKVYSYLGRQ 68
Query: 122 KSAK--KP---LVVAGCVPQ--GSRDLKELEGVSIV-GVQQIDRVVEVVEETLKGHEVRL 173
K KP L+VAGCV Q G + L+ + + +V G Q +R+ ++++E L G++V
Sbjct: 69 AKRKHEKPDLTLIVAGCVAQQEGEKLLRRVPELDLVMGPQHANRLQDLLQEVLAGNQVVA 128
Query: 174 LHRKKLPALDLPKVRRNKFVEILPINV--GCLGACTYCKTKHARGHLGSYTVESLVGRVR 231
+ D+ K RR V +NV GC CTYC + RG S T +++ +
Sbjct: 129 TEPIHI-VEDITKPRRESTVTAW-VNVIYGCNERCTYCVVPNVRGVEQSRTPQAIRAEMV 186
Query: 232 TVIADGVKEVWLSSEDTGAYGRDI------GVNLPILLNAI--VAELPPDGSTMLRIGMT 283
+ G KE+ L ++ AYGRD+ G + L + + V ++P G +R +
Sbjct: 187 ELGQQGYKEITLLGQNIDAYGRDLPGVTESGRHQHTLTDLLYYVNDVP--GIERIRFATS 244
Query: 284 NPPFILEHLKEIAEVLRHPCVYSFLHVPVQSGSDAVLSAMNREYTLSDFRTVVDTLIELV 343
+P + E L I P V H+P QSG + +L AM R YT +R ++D + E +
Sbjct: 245 HPRYFTERL--IVACKELPKVCEHFHIPFQSGDNDLLKAMKRGYTHERYRQIIDKIREYM 302
Query: 344 PGMQIATDIICGFPGETDEDFNQTVNLIKEYKFPQVHISQFYPRPG 389
P I+ D I GFPGET+ F T+ L+++ F Q++ + + PRPG
Sbjct: 303 PDASISADAIVGFPGETEAQFENTLKLVEDIGFDQLNTAAYSPRPG 348
>sp|Q9WZC1|MIAB_THEMA (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB
OS=Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM
3109 / JCM 10099) GN=miaB PE=1 SV=1
Length = 443
Score = 174 bits (441), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 110/338 (32%), Positives = 184/338 (54%), Gaps = 15/338 (4%)
Query: 61 IYMKTFGCSHNQSDSEYMAGQLSAFGYALTDNSEEADIWLINTCTVKSPSQSAMDTLIAK 120
Y+KTFGC N++DSE MAG L G+ + EEAD+ +INTC V+ S+ + + +
Sbjct: 3 FYIKTFGCQMNENDSEAMAGLLVKEGFTPASSPEEADVVIINTCAVRRKSEEKAYSELGQ 62
Query: 121 CKSAKKPLV----VAGCVPQGSRDLKELEGVSIV-GVQQIDRVVEVVEETLKGHEVRLL- 174
KK VAGCV + R+ +G V G + + RV E V++ L+G +V L
Sbjct: 63 VLKLKKKKKIVVGVAGCVAEKEREKFLEKGADFVLGTRAVPRVTEAVKKALEGEKVALFE 122
Query: 175 -HRKKLPALDLPKVRRNKFVEILPINVGCLGACTYCKTKHARGHLGSYTVESLVGRVRTV 233
H + +LP++R ++ + I GC CTYC + RG S + ++ V+ +
Sbjct: 123 DHLDEYTH-ELPRIRTSRHHAWVTIIHGCDRFCTYCIVPYTRGRERSRPMADILEEVKKL 181
Query: 234 IADGVKEVWLSSEDTGAYGRDI--GVNLPILLNAIVAELPPDGSTMLRIGMTNPPFILEH 291
G +EV ++ AYG+D+ G +L LL +G + + P +
Sbjct: 182 AEQGYREVTFLGQNVDAYGKDLKDGSSLAKLLEEAS---KIEGIERIWFLTSYPTDFSDE 238
Query: 292 LKEIAEVLRHPCVYSFLHVPVQSGSDAVLSAMNREYTLSDFRTVVDTLIELVPGMQIATD 351
L E+ + ++P V +H+PVQSGS+ +L MNR YT ++ +++ + VP + I++D
Sbjct: 239 LIEV--IAKNPKVAKSVHLPVQSGSNRILKLMNRRYTKEEYLALLEKIRSKVPEVAISSD 296
Query: 352 IICGFPGETDEDFNQTVNLIKEYKFPQVHISQFYPRPG 389
II GFP ET+EDF +TV+L+++ +F +++++ + PR G
Sbjct: 297 IIVGFPTETEEDFMETVDLVEKAQFERLNLAIYSPREG 334
>sp|Q3M8N9|MIAB_ANAVT (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB
OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937)
GN=miaB PE=3 SV=1
Length = 454
Score = 173 bits (438), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 112/347 (32%), Positives = 181/347 (52%), Gaps = 26/347 (7%)
Query: 62 YMKTFGCSHNQSDSEYMAGQLSAFGYALTDNSEEADIWLINTCTVKSPSQSAMDTLIAKC 121
++ TFGC N++DSE MAG L G+ +++ AD+ L NTCT++ ++ + + + +
Sbjct: 9 HITTFGCQMNKADSERMAGILEDMGFEFSEDPNNADVILYNTCTIRDNAEQKVYSYLGRQ 68
Query: 122 KSAKKP-----LVVAGCVPQ--GSRDLKELEGVSIV-GVQQIDRVVEVVEETLKGHEVRL 173
K LVVAGCV Q G L+ + + +V G Q +R+ +++E G++V
Sbjct: 69 AKRKHEQPDLTLVVAGCVAQQEGEALLRRVPELDLVMGPQHANRLKDLLESVFAGNQVVA 128
Query: 174 LHRKKLPALDLPKVRRNKFVEILPINV--GCLGACTYCKTKHARGHLGSYTVESLVGRVR 231
+ D+ + RR+ V +NV GC CTYC + RG S T E++ +
Sbjct: 129 TEAVHIME-DITQARRDSTVTAW-VNVIYGCNERCTYCVVPNVRGVEQSRTPEAVRAEME 186
Query: 232 TVIADGVKEVWLSSEDTGAYGRDI------GVNLPILLNAI--VAELPPDGSTMLRIGMT 283
+ G KE+ L ++ AYGRD+ G +L + + V ++P G +R +
Sbjct: 187 ELGRQGYKEITLLGQNIDAYGRDLPGATPEGRHLHTFTDLLYYVHDVP--GIERIRFATS 244
Query: 284 NPPFILEHL-KEIAEVLRHPCVYSFLHVPVQSGSDAVLSAMNREYTLSDFRTVVDTLIEL 342
+P + E L K AE+ P V H+P QSG + +L AM R YT +R ++DT+
Sbjct: 245 HPRYFTERLIKACAEL---PKVCEHFHIPFQSGDNQLLKAMARGYTQEKYRRIIDTIRRY 301
Query: 343 VPGMQIATDIICGFPGETDEDFNQTVNLIKEYKFPQVHISQFYPRPG 389
+P I+ D I GFPGET+E F T+ L+ + F Q++ + + PRPG
Sbjct: 302 MPDASISADAIVGFPGETEEQFENTLKLVDDIGFDQLNTAAYSPRPG 348
>sp|B7GJM6|MIAB_ANOFW (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB
OS=Anoxybacillus flavithermus (strain DSM 21510 / WK1)
GN=miaB PE=3 SV=1
Length = 527
Score = 172 bits (436), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 108/341 (31%), Positives = 176/341 (51%), Gaps = 15/341 (4%)
Query: 61 IYMKTFGCSHNQSDSEYMAGQLSAFGYALTDNSEEADIWLINTCTVKSPSQSAMDTLIAK 120
Y++T+GC N+ D+E MAG A GY TD E+A++ L+NTC ++ +++ + I
Sbjct: 86 FYIRTYGCQMNEHDTEVMAGIFMALGYEPTDRPEDANVILLNTCAIRENAENKVFGEIGH 145
Query: 121 CKSAKKP-----LVVAGCVPQG----SRDLKELEGVSIV-GVQQIDRVVEVVEETLKGHE 170
K K+ L V GC+ Q ++ LK+ + V ++ G I R+ +++E E
Sbjct: 146 LKPLKQNNPDLLLGVCGCMSQEESVVNKILKQFQYVDMIFGTHNIHRLPYILKEAYMSKE 205
Query: 171 --VRLLHRKKLPALDLPKVRRNKFVEILPINVGCLGACTYCKTKHARGHLGSYTVESLVG 228
V + ++ +LPKVR+ + I GC CTYC + RG S E ++
Sbjct: 206 MVVEVWSKEGDVIENLPKVRKGNIKAWVNIMYGCDKFCTYCIVPYTRGKERSRRPEDIIQ 265
Query: 229 RVRTVIADGVKEVWLSSEDTGAYGRDIGVNLPILLNAIVAELPPDGSTMLRIGMTNPPFI 288
VR + A G KE+ L ++ AYG+D ++ L ++ EL +R ++P
Sbjct: 266 EVRHLAAQGYKEITLLGQNVNAYGKDF-TDMKYGLGDLMDELRKIDIPRIRFTTSHPRDF 324
Query: 289 LEHLKEIAEVLRHPCVYSFLHVPVQSGSDAVLSAMNREYTLSDFRTVVDTLIELVPGMQI 348
+ L E+ + + + +H+PVQSGS VL M R+YT + +V + E +PG+ +
Sbjct: 325 DDRLIEV--LAKGGNLVEHIHLPVQSGSSEVLKMMARKYTREQYLELVRKIKEAIPGVAL 382
Query: 349 ATDIICGFPGETDEDFNQTVNLIKEYKFPQVHISQFYPRPG 389
TDII GFP ETDE F +T++L +E +F + PR G
Sbjct: 383 TTDIIVGFPNETDEQFEETLSLYREVEFDSAFTFIYSPREG 423
>sp|Q8DJB2|MIAB_THEEB (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB
OS=Thermosynechococcus elongatus (strain BP-1) GN=miaB
PE=3 SV=1
Length = 450
Score = 171 bits (434), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 112/344 (32%), Positives = 175/344 (50%), Gaps = 22/344 (6%)
Query: 62 YMKTFGCSHNQSDSEYMAGQLSAFGYALTDNSEEADIWLINTCTVKSPSQSAMDTLIAKC 121
Y+ TFGC N++DSE MAG L A G L +EAD+ L NTCT++ ++ + + + +
Sbjct: 6 YITTFGCQMNKADSERMAGILEAMGLELAAEPDEADVLLYNTCTIRDNAEQKLYSYLGRQ 65
Query: 122 KSAKKP-----LVVAGCVPQ--GSRDLKELEGVSIV-GVQQIDRVVEVVEETLKGHEVRL 173
K L+VAGCV Q G + L+ + V +V G Q +R+ E++E+ G +V
Sbjct: 66 AKRKHQDPNLTLIVAGCVAQQEGEQLLRRVPEVDLVMGPQYANRLGELLEQVWNGSQVVA 125
Query: 174 LHRKKLPALDLPKVRRNKFVEILPINV--GCLGACTYCKTKHARGHLGSYTVESLVGRVR 231
++ D+ K RR+ V +NV GC CTYC RG S E++ +
Sbjct: 126 TEPLQI-VEDITKPRRDSTVTAW-VNVIYGCNERCTYCVVPGVRGQEQSRRPEAIRAEIE 183
Query: 232 TVIADGVKEVWLSSEDTGAYGRDI------GVNLPILLNAIVAELPPDGSTMLRIGMTNP 285
+ A G KEV L ++ AYGRD+ G + + G +R ++P
Sbjct: 184 ELAAQGYKEVTLLGQNIDAYGRDLPGITPEGRRQHTFTDLLYYIHDVAGIERIRFATSHP 243
Query: 286 PFILEHL-KEIAEVLRHPCVYSFLHVPVQSGSDAVLSAMNREYTLSDFRTVVDTLIELVP 344
+ E L + AE+ P V H+P QSG + +L AM R YT + +++T+ +P
Sbjct: 244 RYFTERLIRACAEL---PKVCKHFHIPFQSGDNEILKAMARGYTRERYLHIIETIRRYMP 300
Query: 345 GMQIATDIICGFPGETDEDFNQTVNLIKEYKFPQVHISQFYPRP 388
I+ D I GFPGET+E F +T++L+ F Q++ + + PRP
Sbjct: 301 DAAISADAIVGFPGETEEQFQRTLDLVAAVGFDQLNTAAYSPRP 344
>sp|Q5L0E8|MIAB_GEOKA (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB
OS=Geobacillus kaustophilus (strain HTA426) GN=miaB PE=3
SV=1
Length = 531
Score = 171 bits (434), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 107/347 (30%), Positives = 176/347 (50%), Gaps = 15/347 (4%)
Query: 61 IYMKTFGCSHNQSDSEYMAGQLSAFGYALTDNSEEADIWLINTCTVKSPSQSAMDTLIAK 120
Y++T+GC N+ D+E MAG A GY TD EEA++ L+NTC ++ +++ + +
Sbjct: 82 FYIRTYGCQMNEHDTEVMAGIFMALGYEPTDRPEEANVILLNTCAIRENAENKVFGELGY 141
Query: 121 CKSAKKP-----LVVAGCVPQGS----RDLKELEGVSIV-GVQQIDRVVEVVEETLKGHE 170
K K L V GC+ Q + LK+ + V ++ G I R+ ++ E E
Sbjct: 142 LKPLKTTNPDLLLGVCGCMSQEESVVKKILKQYQYVDLIFGTHNIHRLPYILHEAYMSKE 201
Query: 171 --VRLLHRKKLPALDLPKVRRNKFVEILPINVGCLGACTYCKTKHARGHLGSYTVESLVG 228
V + ++ +LPKVR+ K + I GC CTYC + RG S E ++
Sbjct: 202 MVVEVWSKEGDVVENLPKVRKGKIKAWVNIMYGCDKFCTYCIVPYTRGKERSRRPEDIIQ 261
Query: 229 RVRTVIADGVKEVWLSSEDTGAYGRDIGVNLPILLNAIVAELPPDGSTMLRIGMTNPPFI 288
VR + A G KE+ L ++ AYG+D ++ L ++ EL +R ++P
Sbjct: 262 EVRQLAAQGYKEITLLGQNVNAYGKDF-TDIQYGLGDLMDELRKIDIARIRFTTSHPRDF 320
Query: 289 LEHLKEIAEVLRHPCVYSFLHVPVQSGSDAVLSAMNREYTLSDFRTVVDTLIELVPGMQI 348
+ L E+ + + + +H+PVQSGS +L M R+YT ++ +V + +P + +
Sbjct: 321 DDRLIEV--LAKRGNLVEHIHLPVQSGSTEILKMMGRKYTREEYLELVRKIKAAIPDVAL 378
Query: 349 ATDIICGFPGETDEDFNQTVNLIKEYKFPQVHISQFYPRPGIQFLNL 395
TDII GFP ETDE F +T++L +E +F + + PR G N+
Sbjct: 379 TTDIIVGFPNETDEQFEETLSLYREVEFDSAYTFIYSPREGTPAANM 425
>sp|B1XQK7|MIAB_SYNP2 (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB
OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 /
PR-6) GN=miaB PE=3 SV=1
Length = 451
Score = 171 bits (433), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 117/356 (32%), Positives = 181/356 (50%), Gaps = 28/356 (7%)
Query: 62 YMKTFGCSHNQSDSEYMAGQLSAFGYALTDNSEEADIWLINTCTVKSPSQSAMDTLIAKC 121
++ TFGC N++DSE MAG L GY T++ AD+ L NTCT++ ++ + + + +
Sbjct: 8 HITTFGCQMNKADSERMAGILEEMGYHFTEDPYAADLVLYNTCTIRDNAEQKVYSYLGRQ 67
Query: 122 KSAK--KP---LVVAGCVPQGS-----RDLKELEGVSIVGVQQIDRVVEVVEETLKGHEV 171
K KP L+VAGCV Q R + EL+ I+G Q +R+ +++E+ G +V
Sbjct: 68 AKRKQEKPDLTLIVAGCVAQQEGESLLRRVPELD--LIMGPQHANRLQDLLEQVEGGSQV 125
Query: 172 RLLHRKKLPALDLPKVRRNKFVEILPINV--GCLGACTYCKTKHARGHLGSYTVESLVGR 229
+ D+ K RR+ V +NV GC CTYC RG S E++
Sbjct: 126 VATEPIHI-VEDITKPRRDSTVTAW-VNVIYGCNEHCTYCVVPGVRGTEQSRYPEAIRAE 183
Query: 230 VRTVIADGVKEVWLSSEDTGAYGRDI------GVNLPILLNAI--VAELPPDGSTMLRIG 281
+ + G KEV L ++ AYGRD+ G N L + + V ++P G +R
Sbjct: 184 MEELGRQGFKEVTLLGQNIDAYGRDLPGTTPEGRNKYTLTDLLYYVHDVP--GIERIRFA 241
Query: 282 MTNPPFILEHLKEIAEVLRHPCVYSFLHVPVQSGSDAVLSAMNREYTLSDFRTVVDTLIE 341
++P + E L + + L P V H+P QSG + VL AM R YT +R +++T+
Sbjct: 242 TSHPRYFTERLIKACQEL--PKVCEHFHIPFQSGDNEVLKAMRRGYTHEKYRRIINTIRS 299
Query: 342 LVPGMQIATDIICGFPGETDEDFNQTVNLIKEYKFPQVHISQFYPRPGIQFLNLDS 397
+P I+ D I FPGET+E F T+ L+ E F Q++ + + PRPG D+
Sbjct: 300 YMPDASISADAIVAFPGETEEQFENTLKLVDEIGFDQLNTAAYSPRPGTPAATWDN 355
>sp|B0C0E2|MIAB_ACAM1 (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB
OS=Acaryochloris marina (strain MBIC 11017) GN=miaB PE=3
SV=1
Length = 454
Score = 171 bits (432), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 115/346 (33%), Positives = 185/346 (53%), Gaps = 24/346 (6%)
Query: 62 YMKTFGCSHNQSDSEYMAGQLSAFGYALTDNSEEADIWLINTCTVKSPSQSAMDTLI--- 118
++ T+GC N++DSE MAG L GY ++N ++A++ L NTCT++ ++ + + +
Sbjct: 9 HITTYGCQMNKADSERMAGVLENMGYQWSENPDDANLILCNTCTIRDNAEHKVYSYLGRQ 68
Query: 119 AKCKSAKK--PLVVAGCVPQGSRD--LKELEGVSIV-GVQQIDRVVEVVEETLKGHEVRL 173
AK K A+ LVVAGCV Q D L+ + + +V G Q +R+ +++E+ G +V L
Sbjct: 69 AKRKHAQPDLTLVVAGCVAQQEGDALLRRVPELDLVMGPQHANRLQDLLEQVASGQQV-L 127
Query: 174 LHRKKLPALDLPKVRRNKFVEILPINV--GCLGACTYCKTKHARGHLGSYTVESLVGRVR 231
D+ K RR+ V +NV GC CTYC + RG S T E++ +
Sbjct: 128 ATEPIHIVEDITKPRRDSAVTAW-VNVIYGCNERCTYCVVPNVRGVEQSRTPEAIRAEMV 186
Query: 232 TVIADGVKEVWLSSEDTGAYGRDI------GVNLPILLNAI--VAELPPDGSTMLRIGMT 283
+ G KEV L ++ AYGRD+ G + L + + V ++P G +R +
Sbjct: 187 QLGEQGFKEVTLLGQNIDAYGRDLPGTTSEGRHQHTLTDLLYFVHDVP--GIERIRFATS 244
Query: 284 NPPFILEHLKEIAEVLRHPCVYSFLHVPVQSGSDAVLSAMNREYTLSDFRTVVDTLIELV 343
+P + E L I P V H+P QSG + VL AM+R YT +R ++D + ++
Sbjct: 245 HPRYFTERL--IQACYELPKVCEHFHIPFQSGDNDVLKAMSRGYTHEKYRRIIDNIRAIM 302
Query: 344 PGMQIATDIICGFPGETDEDFNQTVNLIKEYKFPQVHISQFYPRPG 389
P I+ D I GFPGET+E F T+ L+++ +F ++ + + PRPG
Sbjct: 303 PDASISADAIVGFPGETEEQFMNTMQLVEDIEFDLLNTAAYSPRPG 348
>sp|Q65JE5|MIAB_BACLD (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB
OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580)
GN=miaB PE=3 SV=1
Length = 509
Score = 171 bits (432), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 109/341 (31%), Positives = 178/341 (52%), Gaps = 15/341 (4%)
Query: 61 IYMKTFGCSHNQSDSEYMAGQLSAFGYALTDNSEEADIWLINTCTVKSPSQSAMDTLIAK 120
Y++T+GC N+ D+E MAG A GY TD++E+A++ L+NTC ++ +++ + I
Sbjct: 68 FYIRTYGCQMNEHDTEVMAGIFMALGYEPTDSTEDANVILLNTCAIRENAENKVFGEIGH 127
Query: 121 CKSAKKP-----LVVAGCVPQG----SRDLKELEGVSIV-GVQQIDRVVEVVEETLKGHE 170
K+ KK L V GC+ Q +R LK+ V ++ G I R+ E++ E E
Sbjct: 128 LKALKKDNPDLILGVCGCMSQEESVVNRILKKHPFVDLIFGTHNIHRLPELLSEAYLSKE 187
Query: 171 --VRLLHRKKLPALDLPKVRRNKFVEILPINVGCLGACTYCKTKHARGHLGSYTVESLVG 228
+ + ++ +LPKVR K + I GC CTYC + RG S E ++
Sbjct: 188 MVIEVWSKEGDVIENLPKVRTGKIKGWVNIMYGCDKFCTYCIVPYTRGKERSRRPEDIIQ 247
Query: 229 RVRTVIADGVKEVWLSSEDTGAYGRDIGVNLPILLNAIVAELPPDGSTMLRIGMTNPPFI 288
VR + A+G KE+ L ++ AYG+D ++ L ++ EL +R ++P
Sbjct: 248 EVRRLAAEGYKEITLLGQNVNAYGKDFE-DMEYGLGHLMDELRKIDIPRIRFTTSHPRDF 306
Query: 289 LEHLKEIAEVLRHPCVYSFLHVPVQSGSDAVLSAMNREYTLSDFRTVVDTLIELVPGMQI 348
+HL E+ + + + +H+PVQSGS VL M R+Y + +V + + +P +
Sbjct: 307 DDHLIEV--LAKGGNLLDHIHLPVQSGSSDVLKLMARKYDRERYLELVAKIKKAMPNASL 364
Query: 349 ATDIICGFPGETDEDFNQTVNLIKEYKFPQVHISQFYPRPG 389
TDII GFP ETDE F +T++L +E +F + + PR G
Sbjct: 365 TTDIIVGFPNETDEQFEETLSLYREVEFDSAYTFIYSPREG 405
>sp|Q8YXA3|MIAB_NOSS1 (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB OS=Nostoc
sp. (strain PCC 7120 / UTEX 2576) GN=miaB PE=3 SV=1
Length = 454
Score = 171 bits (432), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 111/347 (31%), Positives = 180/347 (51%), Gaps = 26/347 (7%)
Query: 62 YMKTFGCSHNQSDSEYMAGQLSAFGYALTDNSEEADIWLINTCTVKSPSQSAMDTLIAKC 121
++ TFGC N++DSE MAG L G+ +++ AD+ L NTCT++ ++ + + + +
Sbjct: 9 HITTFGCQMNKADSERMAGILEDMGFKFSEDPNNADLILYNTCTIRDNAEQKVYSYLGRQ 68
Query: 122 KSAKKP-----LVVAGCVPQ--GSRDLKELEGVSIV-GVQQIDRVVEVVEETLKGHEVRL 173
K LVVAGCV Q G L+ + + +V G Q +R+ +++E G++V
Sbjct: 69 AKRKHEQPDLTLVVAGCVAQQEGEALLRRVPELDLVMGPQHANRLKDLLESVFAGNQVVA 128
Query: 174 LHRKKLPALDLPKVRRNKFVEILPINV--GCLGACTYCKTKHARGHLGSYTVESLVGRVR 231
+ D+ + RR+ V +NV GC CTYC + RG S T ++ +
Sbjct: 129 TEAVHIME-DITQARRDSTVTAW-VNVIYGCNERCTYCVVPNVRGVEQSRTPAAVRAEME 186
Query: 232 TVIADGVKEVWLSSEDTGAYGRDI------GVNLPILLNAI--VAELPPDGSTMLRIGMT 283
+ G KE+ L ++ AYGRD+ G +L + + V ++P G +R +
Sbjct: 187 ELGRQGYKEITLLGQNIDAYGRDLPGATPEGRHLHTFTDLLYYVHDVP--GVERIRFATS 244
Query: 284 NPPFILEHL-KEIAEVLRHPCVYSFLHVPVQSGSDAVLSAMNREYTLSDFRTVVDTLIEL 342
+P + E L K AE+ P V H+P QSG + +L AM R YT +R ++DT+
Sbjct: 245 HPRYFTERLIKACAEL---PKVCEHFHIPFQSGDNQLLKAMARGYTQEKYRRIIDTIRRY 301
Query: 343 VPGMQIATDIICGFPGETDEDFNQTVNLIKEYKFPQVHISQFYPRPG 389
+P I+ D I GFPGET+E F T+ L+ + F Q++ + + PRPG
Sbjct: 302 MPDASISADAIVGFPGETEEQFENTLKLVDDIGFDQLNTAAYSPRPG 348
>sp|Q119H9|MIAB_TRIEI (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB
OS=Trichodesmium erythraeum (strain IMS101) GN=miaB PE=3
SV=1
Length = 451
Score = 170 bits (430), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 112/348 (32%), Positives = 183/348 (52%), Gaps = 28/348 (8%)
Query: 62 YMKTFGCSHNQSDSEYMAGQLSAFGYALTDNSEEADIWLINTCTVKSPSQSAMDTLIAKC 121
++ TFGC N++DSE MAG L G +++ +ADI L NTCT++ ++ + + + +
Sbjct: 9 HITTFGCQMNKADSERMAGILDNMGLISSEDPNKADIILYNTCTIRDNAEQKVYSYLGRQ 68
Query: 122 --KSAKKP---LVVAGCVPQGS-----RDLKELEGVSIVGVQQIDRVVEVVEETLKGHEV 171
+ K+P L+VAGCV Q R + EL+ I+G Q +R+ +++E+ G++V
Sbjct: 69 AKRKHKQPDLTLIVAGCVAQQEGAALLRRVPELD--LIMGPQHANRLQDLLEQVFNGNQV 126
Query: 172 RLLHRKKLPALDLPKVRRN-KFVEILPINVGCLGACTYCKTKHARGHLGSYTVESLVGRV 230
+ D+ K RR+ K + I GC CTYC RG S T E++ +
Sbjct: 127 VATEPIHI-VEDITKPRRDSKITAWVNIIYGCNEHCTYCVVPSVRGVEQSRTPEAIRAEM 185
Query: 231 RTVIADGVKEVWLSSEDTGAYGRDI------GVNLPILLNAI--VAELPPDGSTMLRIGM 282
+ G +E+ L ++ AYGRD+ G N + + V ++P G +R
Sbjct: 186 EELGRQGYQEITLLGQNIDAYGRDLPGVTKEGRNKYTFTDLLYYVHDVP--GVERIRFAT 243
Query: 283 TNPPFILEHL-KEIAEVLRHPCVYSFLHVPVQSGSDAVLSAMNREYTLSDFRTVVDTLIE 341
++P + E L + AE+ P V H+P QSG + +L AM R YT +R ++D + E
Sbjct: 244 SHPRYFTERLIRACAEL---PKVCEHFHIPFQSGDNKLLKAMARGYTHEKYRRIIDKIRE 300
Query: 342 LVPGMQIATDIICGFPGETDEDFNQTVNLIKEYKFPQVHISQFYPRPG 389
L+P I+ D I GFPGET+ F T+ L+++ F Q++ + + PRPG
Sbjct: 301 LMPDASISADAIVGFPGETEAQFENTLKLVEDIGFDQLNTAAYSPRPG 348
>sp|Q5N199|MIAB_SYNP6 (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB
OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 /
SAUG 1402/1) GN=miaB PE=3 SV=1
Length = 452
Score = 170 bits (430), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 106/350 (30%), Positives = 182/350 (52%), Gaps = 22/350 (6%)
Query: 62 YMKTFGCSHNQSDSEYMAGQLSAFGYALTDNSEEADIWLINTCTVKSPSQSAMDTLIAKC 121
++ TFGC N++DSE MAG L GY ++ + +AD+ L NTCT++ ++ + + + +
Sbjct: 8 HITTFGCQMNKADSERMAGILEDLGYIWSEEANDADLVLYNTCTIRDNAEQKVYSYLGRQ 67
Query: 122 KSAKKP-----LVVAGCVPQ--GSRDLKELEGVSIV-GVQQIDRVVEVVEETLKGHEVRL 173
K+ L+VAGCV Q G L+ + + +V G Q +R+ +++ + G +V
Sbjct: 68 AERKRQQPDLTLIVAGCVAQQEGESLLRRVPELDLVMGPQHANRLADLLAQVEAGSQVVA 127
Query: 174 LHRKKLPALDLPKVRRNKFVEILPINV--GCLGACTYCKTKHARGHLGSYTVESLVGRVR 231
++ A D+ + RR+ + +NV GC CTYC + RG S ++ +
Sbjct: 128 TEEVEI-AEDITQPRRDSTITAW-VNVIYGCNERCTYCVVPNVRGREQSREPAAIRAEIE 185
Query: 232 TVIADGVKEVWLSSEDTGAYGRDI------GVNLPILLNAIVAELPPDGSTMLRIGMTNP 285
+ A G +E+ L ++ AYGRD+ G +L L + + G +R ++P
Sbjct: 186 QLAAQGYREITLLGQNIDAYGRDLPGSTPEGRHLHTLTDLLYTIHDVPGIERIRFATSHP 245
Query: 286 PFILEHL-KEIAEVLRHPCVYSFLHVPVQSGSDAVLSAMNREYTLSDFRTVVDTLIELVP 344
+ E L + AE+ P V + H+P QSG + VL AM R YT+ + +V+ + +++P
Sbjct: 246 RYFTERLIRACAEL---PKVCEYFHIPFQSGDNDVLKAMARGYTVERYLRIVEQIRDIIP 302
Query: 345 GMQIATDIICGFPGETDEDFNQTVNLIKEYKFPQVHISQFYPRPGIQFLN 394
I+ D I FPGET+E F T+ L+++ F V+ + + PRPG N
Sbjct: 303 DAAISADAIVAFPGETEEQFENTLKLVEQVGFDLVNTAAYSPRPGTPAAN 352
>sp|Q31KL5|MIAB_SYNE7 (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB
OS=Synechococcus elongatus (strain PCC 7942) GN=miaB
PE=3 SV=1
Length = 452
Score = 170 bits (430), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 106/350 (30%), Positives = 182/350 (52%), Gaps = 22/350 (6%)
Query: 62 YMKTFGCSHNQSDSEYMAGQLSAFGYALTDNSEEADIWLINTCTVKSPSQSAMDTLIAKC 121
++ TFGC N++DSE MAG L GY ++ + +AD+ L NTCT++ ++ + + + +
Sbjct: 8 HITTFGCQMNKADSERMAGILEDLGYIWSEEANDADLVLYNTCTIRDNAEQKVYSYLGRQ 67
Query: 122 KSAKKP-----LVVAGCVPQ--GSRDLKELEGVSIV-GVQQIDRVVEVVEETLKGHEVRL 173
K+ L+VAGCV Q G L+ + + +V G Q +R+ +++ + G +V
Sbjct: 68 AERKRQQPDLTLIVAGCVAQQEGESLLRRVPELDLVMGPQHANRLADLLAQVEAGSQVVA 127
Query: 174 LHRKKLPALDLPKVRRNKFVEILPINV--GCLGACTYCKTKHARGHLGSYTVESLVGRVR 231
++ A D+ + RR+ + +NV GC CTYC + RG S ++ +
Sbjct: 128 TEEVEI-AEDITQPRRDSTITAW-VNVIYGCNERCTYCVVPNVRGREQSREPAAIRAEIE 185
Query: 232 TVIADGVKEVWLSSEDTGAYGRDI------GVNLPILLNAIVAELPPDGSTMLRIGMTNP 285
+ A G +E+ L ++ AYGRD+ G +L L + + G +R ++P
Sbjct: 186 QLAAQGYREITLLGQNIDAYGRDLPGSTPEGRHLHTLTDLLYTIHDVPGIERIRFATSHP 245
Query: 286 PFILEHL-KEIAEVLRHPCVYSFLHVPVQSGSDAVLSAMNREYTLSDFRTVVDTLIELVP 344
+ E L + AE+ P V + H+P QSG + VL AM R YT+ + +V+ + +++P
Sbjct: 246 RYFTERLIRACAEL---PKVCEYFHIPFQSGDNDVLKAMARGYTVERYLRIVEQIRDIIP 302
Query: 345 GMQIATDIICGFPGETDEDFNQTVNLIKEYKFPQVHISQFYPRPGIQFLN 394
I+ D I FPGET+E F T+ L+++ F V+ + + PRPG N
Sbjct: 303 DAAISADAIVAFPGETEEQFENTLKLVEQVGFDLVNTAAYSPRPGTPAAN 352
>sp|B7JZ48|MIAB_CYAP8 (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB
OS=Cyanothece sp. (strain PCC 8801) GN=miaB PE=3 SV=1
Length = 451
Score = 169 bits (429), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 104/344 (30%), Positives = 180/344 (52%), Gaps = 20/344 (5%)
Query: 62 YMKTFGCSHNQSDSEYMAGQLSAFGYALTDNSEEADIWLINTCTVKSPSQSAMDTLIAKC 121
++ TFGC N++DSE MAG L G+ +++ +AD+ L NTCT++ ++ + + + +
Sbjct: 14 HITTFGCQMNKADSERMAGILENMGFIWSEDPNQADLILYNTCTIRDNAEQKVYSYLGRQ 73
Query: 122 KSAKKP-----LVVAGCVPQ--GSRDLKELEGVSIV-GVQQIDRVVEVVEETLKGHEVRL 173
K L+VAGCV Q G + L+ + + +V G Q +R+ +++++ G++V
Sbjct: 74 AKRKHENPDLTLIVAGCVAQQEGEQILRRVPELDLVMGPQHANRLEDLLQQVFDGNQVVA 133
Query: 174 LHRKKLPALDLPKVRRNKFVEILPINV--GCLGACTYCKTKHARGHLGSYTVESLVGRVR 231
+ D+ K RR+ + +NV GC C+YC + RG S T E+++ +
Sbjct: 134 TEPIHIIE-DITKPRRDSTITAW-VNVIYGCNERCSYCVVPNVRGVEQSRTPEAILAEME 191
Query: 232 TVIADGVKEVWLSSEDTGAYGRDI------GVNLPILLNAIVAELPPDGSTMLRIGMTNP 285
+ G KEV L ++ AYGRD+ G + L + + G +R ++P
Sbjct: 192 LLGKQGYKEVTLLGQNIDAYGRDLPGVTESGRHQHTLTDLLYTVHDVVGIERIRFATSHP 251
Query: 286 PFILEHLKEIAEVLRHPCVYSFLHVPVQSGSDAVLSAMNREYTLSDFRTVVDTLIELVPG 345
+ E L + L C + H+P QSG + +L AM R YT +R ++D + + +P
Sbjct: 252 RYFTERLIAACQELSKVCEH--FHIPFQSGDNDILKAMKRGYTHEKYRQIIDKIRDYMPD 309
Query: 346 MQIATDIICGFPGETDEDFNQTVNLIKEYKFPQVHISQFYPRPG 389
I+ D I GFPGET+E F T+ L+++ F Q++ + + PRPG
Sbjct: 310 ASISADAIVGFPGETEEQFENTLKLVEDIGFDQLNTAAYSPRPG 353
>sp|B5YKW2|MIAB_THEYD (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB
OS=Thermodesulfovibrio yellowstonii (strain ATCC 51303 /
DSM 11347 / YP87) GN=miaB PE=3 SV=1
Length = 431
Score = 169 bits (429), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 104/345 (30%), Positives = 177/345 (51%), Gaps = 15/345 (4%)
Query: 60 TIYMKTFGCSHNQSDSEYMAGQLSAFGYALTDNSEEADIWLINTCTVKSPSQSAMDTLIA 119
+Y+KTFGC N+ DSE M G L G+ D ++ADI + NTC ++ ++ + +
Sbjct: 5 AVYIKTFGCQMNEHDSERMLGILGTKGFIEVDEPKKADIVIFNTCAIRHKAEQKFFSSLG 64
Query: 120 KCKSAKKP-----LVVAGCVPQ--GSRDLKELEGVS-IVGVQQIDRVVEVVEETLKGHEV 171
+ K KK ++VAGC Q G + L +L + I+G + V+E + E H +
Sbjct: 65 RVKHLKKKNPQLKIIVAGCSAQLQGEKLLNKLPYIDYIIGPDNL-HVIENIIENQVSHRI 123
Query: 172 RLLHRKKLPALDLPKVRRNKFVEILPINVGCLGACTYCKTKHARGHLGSYTVESLVGRVR 231
++ ++LP R++ + I GC CTYC + RG S V+ ++ +
Sbjct: 124 FTDENPEVANINLPVKRKDCVKAWVNIIYGCNNYCTYCVVPYTRGKERSRPVDDIIKEIS 183
Query: 232 TVIADGVKEVWLSSEDTGAYGRDIGVNLPILLNAIVAELPPDGSTMLRIGMTNPPFILEH 291
+ G KEV L ++ +Y +D N P+LL + +G +R ++P + +
Sbjct: 184 LLAEQGYKEVTLLGQNVNSY-KDGNTNFPLLLEKVEK---IEGIKRIRFITSHPKDLSKE 239
Query: 292 LKEIAEVLRHPCVYSFLHVPVQSGSDAVLSAMNREYTLSDFRTVVDTLIELVPGMQIATD 351
L ++ + + C + +H+P+Q+GS+ +L MNR+YT ++ + L E +P + I +D
Sbjct: 240 LVDVMKDYKKICEH--IHLPLQAGSNKILKLMNRKYTYEEYFEKICWLREAIPDIAITSD 297
Query: 352 IICGFPGETDEDFNQTVNLIKEYKFPQVHISQFYPRPGIQFLNLD 396
II GFP E EDF +T+N +KE +F + +F PR G LD
Sbjct: 298 IIVGFPQEQHEDFEKTINALKEIRFDGIFAFKFSPRLGTAAAKLD 342
>sp|B1WU96|MIAB_CYAA5 (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB
OS=Cyanothece sp. (strain ATCC 51142) GN=miaB PE=3 SV=1
Length = 448
Score = 169 bits (429), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 108/343 (31%), Positives = 174/343 (50%), Gaps = 18/343 (5%)
Query: 62 YMKTFGCSHNQSDSEYMAGQLSAFGYALTDNSEEADIWLINTCTVKSPSQSAMDTLIAKC 121
++ TFGC N++DSE MAG L G+ +++ AD+ L NTCT++ ++ + + + +
Sbjct: 11 HITTFGCQMNKADSERMAGILEDMGFKWSEDPNTADLILYNTCTIRDNAEQKVYSYLGRQ 70
Query: 122 KSAKKP-----LVVAGCVPQ--GSRDLKELEGVSIV-GVQQIDRVVEVVEETLKGHEVRL 173
K LVVAGCV Q G + L+ + + +V G Q +R+ +++ + G++V
Sbjct: 71 AKRKHEHPDLTLVVAGCVAQQEGEKILRRVPELDLVMGPQHANRLQDLLTQVFDGNQVVA 130
Query: 174 LHRKKLPALDLPKVRRNKFVEI-LPINVGCLGACTYCKTKHARGHLGSYTVESLVGRVRT 232
+ D+ K RR+ V + I GC C+YC + RG S T E++ +
Sbjct: 131 TEPIHI-VEDITKPRRDSTVTAWVNIIYGCNERCSYCVVPNVRGVEQSRTPEAIYAEMEL 189
Query: 233 VIADGVKEVWLSSEDTGAYGRDI------GVNLPILLNAIVAELPPDGSTMLRIGMTNPP 286
+ G KEV L ++ AYGRD+ G + L + + G LR ++P
Sbjct: 190 LGKQGYKEVTLLGQNIDAYGRDLPGVTETGRHQHTLTDLLYQVHDISGIERLRFATSHPR 249
Query: 287 FILEHLKEIAEVLRHPCVYSFLHVPVQSGSDAVLSAMNREYTLSDFRTVVDTLIELVPGM 346
+ E L + L P V H+P QSG + VL AM R YT +R ++D + E +P
Sbjct: 250 YFTERLIKACHEL--PKVCEHFHIPFQSGDNDVLKAMKRGYTHEKYRHIIDKIREYMPDA 307
Query: 347 QIATDIICGFPGETDEDFNQTVNLIKEYKFPQVHISQFYPRPG 389
I+ D I GFPGET+ F T+ L+ + F Q++ + + PRPG
Sbjct: 308 SISADAIVGFPGETEAQFENTLKLVDDIGFDQLNTAAYSPRPG 350
>sp|A8ERE9|MIAB_ARCB4 (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB
OS=Arcobacter butzleri (strain RM4018) GN=miaB PE=3 SV=1
Length = 436
Score = 169 bits (428), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 120/390 (30%), Positives = 192/390 (49%), Gaps = 16/390 (4%)
Query: 55 IPGTETIYMKTFGCSHNQSDSEYMAGQLSAF-GYALTDNSEEADIWLINTCTVKSPSQSA 113
+ + ++++T GC N +DS+++ +L GY T N E+AD+ +INTC+V+
Sbjct: 1 MSSNKKLFIQTLGCQMNDTDSQHIQAELEKHKGYVTTQNIEDADLIIINTCSVRERPVQK 60
Query: 114 MDTLIAKCKSAKK---PLVVAGCVPQ--GSRDLKELEGVS-IVGVQQIDRVVEVVEETLK 167
+ + I + KK + V GC G +K V +VG + I ++ +VV+ +K
Sbjct: 61 LFSEIGQFNKKKKEGAKIGVCGCTASHLGQDIIKRAPYVDFVVGARNISKIKDVVD--VK 118
Query: 168 GHEVRLLHRKKLPALDLPKVRRNKFVEILPINVGCLGACTYCKTKHARGHLGSYTVESLV 227
G V + + + NK+ + I+VGC CTYC RG S E +V
Sbjct: 119 GA-VEVSIDNDESTYEFSTAKTNKYRASVNISVGCDKKCTYCIVPSTRGEEISIPPEMIV 177
Query: 228 GRVRTVIADGVKEVWLSSEDTGAYGRDIGVNLPILLNAIVAELPPDGSTMLRIGMTNPPF 287
+VR + G EV L ++ +YGR + + + RI T+P
Sbjct: 178 EQVRKSVEQGAVEVMLLGQNVNSYGRKFSDKREKYTFTKLLQDVSKIDGLERIRFTSPHP 237
Query: 288 ILEHLKEIAEVLRHPCVYSFLHVPVQSGSDAVLSAMNREYTLSDFRTVVDTLIELVPGMQ 347
+ + I E ++P + +H+P+QSGS +VL AM R Y+ F + ELVP ++
Sbjct: 238 LHMDDEFIEEFAKNPKISKCIHMPLQSGSTSVLKAMKRGYSKEWFLNRASKMRELVPNLR 297
Query: 348 IATDIICGFPGETDEDFNQTVNLIKEYKFPQVHISQFYPRPGIQFLNLDSTELLSLLFSN 407
I TDII FPGET EDF T++++++ KF Q+ ++ PRPG + LNL EL + S
Sbjct: 298 ITTDIIVAFPGETQEDFLDTLDVVEQVKFDQIFNFKYSPRPGTEALNLKDKELPDEIGSQ 357
Query: 408 YKFTVMLISILVKLHYFSLDDQRNVLFGMT 437
LI L++LH L++ L G T
Sbjct: 358 -----RLID-LIELHKRYLEESMPKLIGET 381
>sp|A4XL48|MIAB_CALS8 (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB
OS=Caldicellulosiruptor saccharolyticus (strain ATCC
43494 / DSM 8903) GN=miaB PE=3 SV=1
Length = 471
Score = 169 bits (427), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 110/348 (31%), Positives = 180/348 (51%), Gaps = 19/348 (5%)
Query: 58 TETIYMKTFGCSHNQSDSEYMAGQLSAFGYALTDNSEEADIWLINTCTVKSPSQSAMDTL 117
+T ++ T+GC N DSE +AG L+A GY T N EEAD+ + NTC V+ ++S +
Sbjct: 35 NKTYHIITYGCQMNVHDSEKLAGMLNAMGYVETQNLEEADLIIFNTCAVREHAESRVYGN 94
Query: 118 IAKCK--SAKKP---LVVAGCVPQGSRDLKELEGVS-----IVGVQQIDRVVEVVEE--T 165
I K KKP + V GC+PQ ++L V I G + + + +++ + T
Sbjct: 95 IGPLKRLKDKKPELIIGVCGCMPQQLEVAQKLAKVFPFLDIIFGTKSLHKFPQLLYKAIT 154
Query: 166 LKGHEVRLLHRKKLPALDLPKVRRNKFVEILPINVGCLGACTYCKTKHARGHLGSYTVES 225
K + + + + +P RR + I GC C+YC + RG S E
Sbjct: 155 TKKTVIDVAEDEDVVVEGIPTARREGVSAFVNIIYGCNNFCSYCIVPYVRGRERSRRPEE 214
Query: 226 LVGRVRTVIADGVKEVWLSSEDTGAYGRDIGVNLPI--LLNAIVAELPPDGSTMLRIGMT 283
++ ++ + A+GVKEV L ++ +YG+D+ +P LL + A +G +R +
Sbjct: 215 IIFEIQQLAANGVKEVTLLGQNVNSYGKDLPDGIPFYKLLEKVNA---IEGIERIRFVTS 271
Query: 284 NPPFILEHLKEIAEVLRHPCVYSFLHVPVQSGSDAVLSAMNREYTLSDFRTVVDTLIELV 343
+P + + L L C + +H+PVQSGS +L MNR YT D+ +V+ L E +
Sbjct: 272 HPKDLSDELIFAMRDLEKVCEH--IHLPVQSGSTRILRQMNRHYTKEDYLRLVEKLKENI 329
Query: 344 PGMQIATDIICGFPGETDEDFNQTVNLIKEYKFPQVHISQFYPRPGIQ 391
P + I TDII GFPGET+EDF T++++++ +F + + R G +
Sbjct: 330 PDIAITTDIIVGFPGETEEDFEDTLDVVRKVEFDSAYTFIYSKRKGTK 377
>sp|B0JVM6|MIAB_MICAN (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB
OS=Microcystis aeruginosa (strain NIES-843) GN=miaB PE=3
SV=1
Length = 446
Score = 168 bits (425), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 106/344 (30%), Positives = 177/344 (51%), Gaps = 20/344 (5%)
Query: 62 YMKTFGCSHNQSDSEYMAGQLSAFGYALTDNSEEADIWLINTCTVKSPSQSAMDTLIAKC 121
++ TFGC N++DSE MAG L G+ ++++ EAD+ L NTCT++ ++ + + + +
Sbjct: 9 HITTFGCQMNKADSERMAGILEDLGFQWSEDANEADLILYNTCTIRDNAEQKVYSYLGRQ 68
Query: 122 KSAKKP-----LVVAGCVPQ--GSRDLKELEGVS-IVGVQQIDRVVEVVEETLKGHEVRL 173
K+ L+VAGCV Q G + L+ + V I+G Q +R+ +++++ G +V
Sbjct: 69 AKRKQTQPDLTLIVAGCVAQQEGEQLLRRVPEVDLIIGPQHANRLGDLLQQVFDGSQVVA 128
Query: 174 LHRKKLPALDLPKVRRNKFVEILPINV--GCLGACTYCKTKHARGHLGSYTVESLVGRVR 231
+ D+ K RR+ + +NV GC CTYC RG S T ++ +
Sbjct: 129 TEPIHIME-DITKPRRDSNITAW-VNVIYGCNERCTYCVVPGVRGVEQSRTPAAIRAEMA 186
Query: 232 TVIADGVKEVWLSSEDTGAYGRDI------GVNLPILLNAIVAELPPDGSTMLRIGMTNP 285
+ G +E+ L ++ AYGRD+ G +L + + G LR ++P
Sbjct: 187 QLGQQGYQEITLLGQNIDAYGRDLPGVTASGRHLHNFTDLLYYVHDVAGIERLRFATSHP 246
Query: 286 PFILEHLKEIAEVLRHPCVYSFLHVPVQSGSDAVLSAMNREYTLSDFRTVVDTLIELVPG 345
+ E L + + L P V H+P QSG + +L AM R YT +R ++ + +L+P
Sbjct: 247 RYFTERLIKACQEL--PKVCEHFHIPFQSGDNDILKAMKRGYTQEKYRQIIANIRDLMPD 304
Query: 346 MQIATDIICGFPGETDEDFNQTVNLIKEYKFPQVHISQFYPRPG 389
I+ D I GFPGET+ F T+ L+ E F Q++ + + PRPG
Sbjct: 305 AAISADAIVGFPGETEAQFENTLKLVDEIGFDQLNTAAYSPRPG 348
>sp|A5D2K1|MIAB_PELTS (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB
OS=Pelotomaculum thermopropionicum (strain DSM 13744 /
JCM 10971 / SI) GN=miaB PE=3 SV=1
Length = 448
Score = 167 bits (424), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 107/343 (31%), Positives = 178/343 (51%), Gaps = 28/343 (8%)
Query: 66 FGCSHNQSDSEYMAGQLSAFGYALTDNSEEADIWLINTCTVKSPSQSAMDTLIAKCKSAK 125
FGC N+ DSE +AG L + GY NSE+ DI LINTC V+ +++ + +L+ + + K
Sbjct: 9 FGCQMNEHDSEVLAGILESMGYCQAGNSEDPDIILINTCCVRKTAENKVFSLLGRLRRQK 68
Query: 126 KP-----LVVAGCVPQGSRDLKELEGVS-----IVGVQQIDRVVEVVEETLKGHEVRLLH 175
+ V GC+PQ + ++ + I G + ++ E++ + ++G + L
Sbjct: 69 AQNPNLIIGVCGCMPQQEGMAERIKQLFPHVDLIFGTHNVHQLPELIGKVIEGQKQVL-- 126
Query: 176 RKKLPAL------DLPKVRRNKFVEILPINVGCLGACTYCKTKHARGHLGSYTVESLVGR 229
+ P +LP R+ + I GC CTYC + RG S + E++
Sbjct: 127 -EIWPGYGGELREELPVKRKEGVRAWVTIMYGCNNFCTYCIVPYVRGREKSRSPEAVYEE 185
Query: 230 VRTVIADGVKEVWLSSEDTGAYGRDIGV--NLPILLNAIVAELPPDGSTMLRIGMTNP-P 286
V + +G KEV L ++ +YG+D+GV + LL ++ DG +R ++P
Sbjct: 186 VARLAGEGFKEVILLGQNVNSYGKDLGVKTDFASLLESLEN---IDGIDRIRYMTSHPRD 242
Query: 287 FILEHLKEIAEVLRHPCVYSFLHVPVQSGSDAVLSAMNREYTLSDFRTVVDTLIELVPGM 346
F L ++ IA + V H+PVQ+GS+ +L MNR YT ++ ++ + L+P
Sbjct: 243 FSLRLVEAIAASKK---VCEHFHLPVQAGSNRILKKMNRGYTREEYVDLIRYIKSLIPHA 299
Query: 347 QIATDIICGFPGETDEDFNQTVNLIKEYKFPQVHISQFYPRPG 389
+ TDI+ GFPGETDEDFN T++L++E +F + + RPG
Sbjct: 300 TVTTDIMVGFPGETDEDFNDTLDLVREIRFDSAYTFVYNIRPG 342
>sp|A4IMH7|MIAB_GEOTN (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB
OS=Geobacillus thermodenitrificans (strain NG80-2)
GN=miaB PE=3 SV=2
Length = 523
Score = 167 bits (424), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 104/341 (30%), Positives = 174/341 (51%), Gaps = 15/341 (4%)
Query: 61 IYMKTFGCSHNQSDSEYMAGQLSAFGYALTDNSEEADIWLINTCTVKSPSQSAMDTLIAK 120
Y++T+GC N+ D+E MAG A GY TD E+A++ L+NTC ++ +++ + +
Sbjct: 82 FYIRTYGCQMNEHDTEVMAGIFMALGYEPTDRPEDANVILLNTCAIRENAENKVFGELGY 141
Query: 121 CKSAKKP-----LVVAGCVPQG----SRDLKELEGVSIV-GVQQIDRVVEVVEETLKGHE 170
K K L V GC+ Q ++ LK+ + V ++ G I R+ ++ E E
Sbjct: 142 LKPLKTTNPDLLLGVCGCMSQEEAVVNKILKQYQYVDLIFGTHNIHRLPYILHEAYMSKE 201
Query: 171 --VRLLHRKKLPALDLPKVRRNKFVEILPINVGCLGACTYCKTKHARGHLGSYTVESLVG 228
V + ++ +LPKVR+ + I GC CTYC + RG S E ++
Sbjct: 202 MVVEVWSKEGDVVENLPKVRKGNIKAWVNIMYGCDKFCTYCIVPYTRGKERSRRPEDIIQ 261
Query: 229 RVRTVIADGVKEVWLSSEDTGAYGRDIGVNLPILLNAIVAELPPDGSTMLRIGMTNPPFI 288
VR + A G KE+ L ++ AYG+D ++ L ++ EL +R ++P
Sbjct: 262 EVRQLAAQGYKEITLLGQNVNAYGKDFN-DIQYGLGDLMDELRKIDIARIRFTTSHPRDF 320
Query: 289 LEHLKEIAEVLRHPCVYSFLHVPVQSGSDAVLSAMNREYTLSDFRTVVDTLIELVPGMQI 348
+ L E+ + + + +H+PVQSGS +L M R+YT ++ +V + +P + +
Sbjct: 321 DDRLIEV--LAKRGNLVEHIHLPVQSGSTEILKMMGRKYTREEYLELVRKIKAAIPDVAL 378
Query: 349 ATDIICGFPGETDEDFNQTVNLIKEYKFPQVHISQFYPRPG 389
TDII GFP ETDE F +T++L +E +F + + PR G
Sbjct: 379 TTDIIVGFPNETDEQFEETLSLYREVEFDSAYTFIYSPREG 419
>sp|A8F716|MIAB_THELT (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB
OS=Thermotoga lettingae (strain ATCC BAA-301 / DSM 14385
/ TMO) GN=miaB PE=3 SV=1
Length = 436
Score = 167 bits (423), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 113/348 (32%), Positives = 182/348 (52%), Gaps = 34/348 (9%)
Query: 61 IYMKTFGCSHNQSDSEYMAGQLSAFGYALTDNSEEADIWLINTCTVKSPSQ----SAMDT 116
++ KT+GC N +D+E MAG LS GY + + EEADI ++NTC V+ SQ SA+
Sbjct: 3 VFFKTYGCQMNLNDTETMAGILSQHGYEVVNLPEEADIVILNTCVVRQKSQEKYHSALGQ 62
Query: 117 LIAKCKSAKKPLV-VAGCVPQGSRDLKELEGVS--------IVGVQQIDRVVEVVEETLK 167
+ KS K L+ +AGC GS LEG ++G + I ++ EV+++ +
Sbjct: 63 FVKLKKSGKIKLIGIAGC---GS----NLEGEELIKSGADFVIGSRSIGKIAEVLQKAAR 115
Query: 168 GHEVRLLHRKKLPALD--LPKVRRNKFVEILPINVGCLGACTYCKTKHARGHLGSYTVES 225
G ++ L + +D P++R +K + I GC CTYC + RG S +
Sbjct: 116 GEKIVYLE-DDICTVDSKTPRMRFSKHHAWITIIHGCNRFCTYCIVPYTRGREKSRPLPD 174
Query: 226 LVGRVRTVIADGVKEVWLSSEDTGAYGRDI--GVNLPILLNAIVAELPPDGSTMLRIGM- 282
++ V + +GVKE+ ++ AYG+D+ G NL L+ E + RI
Sbjct: 175 VLLEVEKLAKNGVKEITFLGQNVDAYGKDLKDGTNLASLI-----EQAGKFEQIKRIWFL 229
Query: 283 -TNPPFILEHLKEIAEVLRHPCVYSFLHVPVQSGSDAVLSAMNREYTLSDFRTVVDTLIE 341
+ P I + L I V P H+PVQSGS+ +L MNR Y F +V+ +
Sbjct: 230 TSYPTDITDKL--IETVAEDPKAAKSFHIPVQSGSNRILRLMNRRYDRDQFLQLVEKIRS 287
Query: 342 LVPGMQIATDIICGFPGETDEDFNQTVNLIKEYKFPQVHISQFYPRPG 389
+P I++DII GFP ET+ D+ QT++L+++ +F +++++ + PR G
Sbjct: 288 KIPHASISSDIIVGFPTETEYDYMQTMDLVRKARFERLNLAVYSPRQG 335
>sp|Q4L5Z6|MIAB_STAHJ (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB
OS=Staphylococcus haemolyticus (strain JCSC1435) GN=miaB
PE=3 SV=1
Length = 514
Score = 167 bits (423), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 105/342 (30%), Positives = 177/342 (51%), Gaps = 15/342 (4%)
Query: 60 TIYMKTFGCSHNQSDSEYMAGQLSAFGYALTDNSEEADIWLINTCTVKSPSQSAMDTLIA 119
T +KT+GC N D+E MAG L A GY T++ EAD+ LINTC ++ +++ + + I
Sbjct: 69 TFLIKTYGCQMNAHDTEVMAGILQALGYTATEDINEADVILINTCAIRENAENKVFSEIG 128
Query: 120 KCKSAKKP-----LVVAGCVPQG----SRDLKELEGVSIV-GVQQIDRVVEVVEETL--K 167
K KK + V GC+ Q ++ LK + V ++ G I ++ E++EE K
Sbjct: 129 NLKHLKKNRPEALIGVCGCMSQEESVVNKILKSYQNVDMIFGTHNIHKLPEILEEAYLSK 188
Query: 168 GHEVRLLHRKKLPALDLPKVRRNKFVEILPINVGCLGACTYCKTKHARGHLGSYTVESLV 227
V + ++ +LPKVR + I GC CTYC RG S E ++
Sbjct: 189 AMVVEVWSKEGDIIENLPKVREGSTKAWVNIMYGCDKFCTYCIVPFTRGKERSRRPEDII 248
Query: 228 GRVRTVIADGVKEVWLSSEDTGAYGRDIGVNLPILLNAIVAELPPDGSTMLRIGMTNPPF 287
VR + DG KE+ L ++ +YG+DI +L L ++ ++ +R ++P
Sbjct: 249 EEVRGLARDGYKEITLLGQNVNSYGKDIK-DLEYGLGDLLEDISKIDIPRVRFTTSHPWD 307
Query: 288 ILEHLKEIAEVLRHPCVYSFLHVPVQSGSDAVLSAMNREYTLSDFRTVVDTLIELVPGMQ 347
+ + E+ + + + +H+PVQSG++AVL M R+YT + +V+ + + +P +
Sbjct: 308 FTDRMIEV--IAKGGNIVPHIHLPVQSGNNAVLKIMGRKYTRESYLDLVNRIKKSIPNVA 365
Query: 348 IATDIICGFPGETDEDFNQTVNLIKEYKFPQVHISQFYPRPG 389
+ TDII G+P ET+E F +T++L E +F + + R G
Sbjct: 366 LTTDIIVGYPNETEEQFEETLSLYDEVQFEHAYTYLYSQRDG 407
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.137 0.406
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 175,002,437
Number of Sequences: 539616
Number of extensions: 7569923
Number of successful extensions: 22924
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1053
Number of HSP's successfully gapped in prelim test: 24
Number of HSP's that attempted gapping in prelim test: 19369
Number of HSP's gapped (non-prelim): 1142
length of query: 453
length of database: 191,569,459
effective HSP length: 121
effective length of query: 332
effective length of database: 126,275,923
effective search space: 41923606436
effective search space used: 41923606436
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 63 (28.9 bits)