BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>012930
MRRKNNLFLMVTGDDVIPYVYELPADLFDILLTCLPPLALQKLQTKMPFRDGDDCGSPDY
CFENGRKRGRYGNFNTVWKKLFKTRWSGFTDQIEPVDWQQRYWEAHVQGCLDEAAELVVL
PSFRGLISDINISDTILNYIGYEQQMNHLACDYSKLSYHCQQFGHYARCLRLQNALCVEE
TCQLLRESKLQSLVLRWIRFEEHVQALCKLLIQNSETLASLEFLHCKLSPSFVEGICRSL
CSKRKRIHKIENLSIDISSFIENCPSSVVVELVSFLSSGRSLCSLKLRHCHLDRDFGRMV
FSSLLEASSSLSILDLSGNSIGGWLSKYDRSGPLFSLGAGKSLQSLRLLNLRGNNLCKAD
ARDLGSALVHIPNLEILDISDNTIEDDGIRSLIPYFVQASERCNPLVELYLENCELSGRG
VSQLLDTLSTLRRPPTSLSIADNNLGRFCANSG

High Scoring Gene Products

Symbol, full name Information P value
AT2G20210 protein from Arabidopsis thaliana 2.3e-94
NLRP13
NACHT, LRR and PYD domains-containing protein 13
protein from Homo sapiens 0.00014
Bt.111263
Uncharacterized protein
protein from Bos taurus 0.00017

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  012930
        (453 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2039027 - symbol:AT2G20210 "AT2G20210" species...   939  2.3e-94   1
UNIPROTKB|Q86W25 - symbol:NLRP13 "NACHT, LRR and PYD doma...    89  0.00014   2
UNIPROTKB|G3MYV6 - symbol:Bt.111263 "Uncharacterized prot...   109  0.00017   2


>TAIR|locus:2039027 [details] [associations]
            symbol:AT2G20210 "AT2G20210" species:3702 "Arabidopsis
            thaliana" [GO:0016114 "terpenoid biosynthetic process"
            evidence=RCA] EMBL:CP002685 IPI:IPI00531808 RefSeq:NP_179611.2
            UniGene:At.39728 ProteinModelPortal:F4IUG1 SMR:F4IUG1
            EnsemblPlants:AT2G20210.1 GeneID:816540 KEGG:ath:AT2G20210
            OMA:RWIRSEK Uniprot:F4IUG1
        Length = 604

 Score = 939 (335.6 bits), Expect = 2.3e-94, P = 2.3e-94
 Identities = 210/441 (47%), Positives = 258/441 (58%)

Query:    10 MVTGDDVIPYVYELPADLFDILLTCLPPLALQKLQTKMPFR--DGDDCGSPDYCFENGRK 67
             ++  D+ IP +YELP++L D ++  LP LALQK QT MPF   D  + G  D C   GRK
Sbjct:    19 LLESDNPIPDLYELPSELLDGIVAHLPALALQKFQTNMPFHCLDSYESGD-DCCLITGRK 77

Query:    68 RGRYGNFNTVWKKLFKTRWSGFTDQIE-PVDWQQRYWEAHVQGCLDEAAELVVLPSFRGL 126
             R R     + WK LFK RW  F D++E P DWQQ YWE H+Q C+DEAAE+ + P+F G 
Sbjct:    78 RARNDVLGSSWKLLFKLRWPDFVDRVESPADWQQLYWEKHLQNCVDEAAEVALRPTFSGR 137

Query:   127 ISDINISDTILNYIGYEQQ-MNHLACDYSKLSYHCQQFGHYARCLRLQNALCVEETCQLL 185
             I  IN+SD IL YI +E+  M    C   +LS+H Q FG Y RCLRL N LCV ET +LL
Sbjct:   138 ICSINVSDNILRYICHEEHIMTCQNCVCKELSFHFQTFGPYLRCLRLLNVLCVTETSELL 197

Query:   186 RESKLQSLVLRWIRFEEHVQALCKLLIQNSETLASLEFLHCKLSPSFVEGICRSLCSKRK 245
             R SKL+SLVLRWIR E+HV+ LCKLLIQ+ ETL SLE +HCKLS S +  IC SL  K  
Sbjct:   198 RTSKLRSLVLRWIRSEKHVEPLCKLLIQSRETLTSLELIHCKLSLSSISAICTSLHEKGI 257

Query:   246 RIHKIENLSIDISSFIENCPXXXXXXXXXXXXXGRSLCSLKLRHCHLDRDFGRMVFXXXX 305
                 ++   I  SS IE  P              R+L SL     +LDR F RMVF    
Sbjct:   258 HTTGMQRFCIKTSS-IEIDPLAAPSAFVSFLMSVRTLHSLHFGDSNLDRYFARMVFSTLL 316

Query:   306 XXXXXXXXXXXXXXXIGGWLSKYDRSGPLFSLGAGKSLQSXXXXXXXXXXXCKADARDLG 365
                            I GWLS +     + SL +GKSLQS            + DA +L 
Sbjct:   317 DSSSNLSSLDLSENNISGWLSTFSCKSVVGSLSSGKSLQSLCKLNLRGNELDRYDAENLA 376

Query:   366 SALVHIPNLEILDISDNTIEDDGIRSLIPYFVQASERCNPLVELYLENCELSGRGVSQLL 425
              AL+H+P LE LD+S N IED GIRSLI YF +  +  + L +L LENCELS  GV + L
Sbjct:   377 HALLHMPGLESLDLSGNPIEDSGIRSLISYFTKNPD--SRLADLNLENCELSCCGVIEFL 434

Query:   426 DTLSTLRRPPTSLSIADNNLG 446
             DTLS L +P   LS+ADN LG
Sbjct:   435 DTLSMLEKPLKFLSVADNALG 455


>UNIPROTKB|Q86W25 [details] [associations]
            symbol:NLRP13 "NACHT, LRR and PYD domains-containing
            protein 13" species:9606 "Homo sapiens" [GO:0005524 "ATP binding"
            evidence=IEA] GO:GO:0005524 Gene3D:1.10.533.10 InterPro:IPR004020
            InterPro:IPR011029 Pfam:PF02758 SUPFAM:SSF47986 PROSITE:PS50824
            InterPro:IPR007111 PROSITE:PS50837 HOGENOM:HOG000294064
            EMBL:AY154468 EMBL:BK001108 IPI:IPI00249591 RefSeq:NP_789780.2
            UniGene:Hs.446924 ProteinModelPortal:Q86W25 SMR:Q86W25
            PhosphoSite:Q86W25 DMDM:145559500 PaxDb:Q86W25 PRIDE:Q86W25
            DNASU:126204 Ensembl:ENST00000342929 GeneID:126204 KEGG:hsa:126204
            UCSC:uc010ygg.2 CTD:126204 GeneCards:GC19M056407 H-InvDB:HIX0040054
            HGNC:HGNC:22937 MIM:609660 neXtProt:NX_Q86W25 PharmGKB:PA162397891
            eggNOG:NOG146595 InParanoid:Q86W25 OMA:ENLHELD OrthoDB:EOG40VVNS
            PhylomeDB:Q86W25 GenomeRNAi:126204 NextBio:81710 Bgee:Q86W25
            CleanEx:HS_NLRP13 Genevestigator:Q86W25 GermOnline:ENSG00000173572
            Uniprot:Q86W25
        Length = 1043

 Score = 89 (36.4 bits), Expect = 0.00014, Sum P(2) = 0.00014
 Identities = 30/115 (26%), Positives = 54/115 (46%)

Query:   142 YEQQMNHLACDYSKLSYHCQQFGHYARCLRLQ-NALCVEETCQLLRESKLQSLVLRWIRF 200
             +E  +N L  +  + S  C +       LRL  ++  +E   ++L  SK  S +  W   
Sbjct:   659 FEVDLNILEDEELQASSFCLKHCKRLNKLRLSVSSHILERDLEILETSKFDSRMHAW--- 715

Query:   201 EEHVQALCKLLIQNSETLASLEFLHCKLSPSFVEGICRSLCSKRKRIHKIENLSI 255
                  ++C  L+ N E L  L+  + KL  S V+G+C +L + R ++ K+   S+
Sbjct:   716 ----NSICSTLVTN-ENLHELDLSNSKLHASSVKGLCLALKNPRCKVQKLTCKSV 765

 Score = 87 (35.7 bits), Expect = 0.00014, Sum P(2) = 0.00014
 Identities = 25/83 (30%), Positives = 43/83 (51%)

Query:   363 DLGSALVHIPNLEILDISDNTIEDDGIRSLIPYFVQASERCNPLVELYLENCELSGRGVS 422
             +L +AL H  N++ILD+ +N ++DDG++ L     +A +    L  L L  C L+     
Sbjct:   943 ELANALSHNHNVKILDLGENDLQDDGVKLLC----EALKPHRALHTLGLAKCNLTTACCQ 998

Query:   423 QLLDTLSTLRRPPTSLSIADNNL 445
              L   LS+  +   +L++  N L
Sbjct:   999 HLFSVLSS-SKSLVNLNLLGNEL 1020


>UNIPROTKB|G3MYV6 [details] [associations]
            symbol:Bt.111263 "Uncharacterized protein" species:9913
            "Bos taurus" [GO:0005524 "ATP binding" evidence=IEA] GO:GO:0005524
            Gene3D:1.10.533.10 InterPro:IPR004020 InterPro:IPR011029
            Pfam:PF02758 SUPFAM:SSF47986 PROSITE:PS50824 InterPro:IPR007111
            PROSITE:PS50837 GeneTree:ENSGT00700000104427 EMBL:DAAA02047820
            EMBL:DAAA02047821 EMBL:DAAA02047822 EMBL:DAAA02047823
            EMBL:DAAA02047824 EMBL:DAAA02047825 EMBL:DAAA02047826
            Ensembl:ENSBTAT00000066236 Uniprot:G3MYV6
        Length = 1037

 Score = 109 (43.4 bits), Expect = 0.00017, Sum P(2) = 0.00017
 Identities = 33/91 (36%), Positives = 50/91 (54%)

Query:   359 ADARDLGSALVHIPNLEILDISDNTIEDDGIRSLIPYFVQASERCNPLVELYLENCELSG 418
             A  R+L  AL H  +L+ILD+ +N I+D+G++ L    V  S  C  L  L LE C L+ 
Sbjct:   932 AGCRELAHALKHNGHLKILDVGNNDIQDEGVKELCS--VLKSPSC-VLQTLGLEKCSLTA 988

Query:   419 ---RGVSQLLDTLSTLRRPPTSLSIADNNLG 446
                R +S +L +  +L     +L++  NNLG
Sbjct:   989 ACCRPLSSVLGSSKSLE----NLNLLGNNLG 1015

 Score = 65 (27.9 bits), Expect = 0.00017, Sum P(2) = 0.00017
 Identities = 45/158 (28%), Positives = 62/158 (39%)

Query:   141 GYEQQMNHLACDYSKLSYHCQQFGHYARCLRLQNALCVEETCQLLRES-KLQSLVLRWIR 199
             G  + + H AC    L Y   + G+      L  A C E+   LL  + +L  L L    
Sbjct:   793 GVFRMLGHSACG---LKYLWLEKGN------LSAAAC-EDLASLLTSTPRLTRLCLGLNP 842

Query:   200 F-EEHVQALCKLLIQNSETLASLEFLHCKLS-PSFVEGICRSLCSKRKRIHKIENLSIDI 257
               +E VQ LC  L +    L  LE   C+LS PS     CR L     R   + +L++  
Sbjct:   843 LGDEGVQLLCGSLTRPECVLQRLELWCCRLSTPS-----CRHLSDALLRSRSLTHLNLRR 897

Query:   258 SSFIENCPXXXXXXXXXXXXXGRSLC---SLKLRHCHL 292
             +S  +                GR+ C   SL L HC L
Sbjct:   898 NSLGDG------GVKLLSSALGRADCALQSLNLSHCSL 929

 Score = 60 (26.2 bits), Expect = 0.00054, Sum P(2) = 0.00054
 Identities = 31/151 (20%), Positives = 67/151 (44%)

Query:   103 WEAHVQGCLDEAAELVVLPSFRGL--ISDINISDTILNYIGYEQQMNHLACDYSKLSYHC 160
             W   ++ C   +     L  F+ L    D N++  +LN +     ++   C++ ++S  C
Sbjct:   611 WAEELERCGAVSGRFDFLWLFQCLHETQDENLARRVLNRLPVAD-LDIQGCEHLRVSSFC 669

Query:   161 QQFGHYARCLRLQNALCVEETCQLLRESKLQSLVLRWIRFEEHV-QALCKLLIQNSETLA 219
              +  H   C +L+  L +  + ++L + +   L      F  H  + +C +    S  L+
Sbjct:   670 LK--H---CQKLRK-LRLSVSHRVLEKKRTSGLGTPDADFRMHQWEDICSVFC--SGNLS 721

Query:   220 SLEFLHCKLSPSFVEGICRSLCSKRKRIHKI 250
              L+  + KLS + +  +C  L + + R+ K+
Sbjct:   722 QLDLSNSKLSTASMMRLCLKLGNPQCRLQKL 752


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.324   0.140   0.440    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      453       410   0.00079  118 3  11 22  0.49    33
                                                     34  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  3
  No. of states in DFA:  618 (66 KB)
  Total size of DFA:  294 KB (2152 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  34.91u 0.11s 35.02t   Elapsed:  00:00:02
  Total cpu time:  34.92u 0.11s 35.03t   Elapsed:  00:00:02
  Start:  Tue May 21 04:57:35 2013   End:  Tue May 21 04:57:37 2013

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