Your job contains 1 sequence.
>012934
METGAHAREVRRIMRAVRLTMALRRKLKAPVLSAFLNFALAPGSEAHSRLLSYLPKEDEH
EMEVDTASSGAPAPAKHPLPELEIYCYLLVLIFLIDKKRYNEAKACSSASIARLKNMNRR
TVDVLAARLYFYYSLCYELTGDLAEIRGNLLALHRIATLRHDELGQETLLNLLLRNYLHY
NLYDQAEKLRSKAPRFEAHSNQQFCRYLFYLGKIRTIQLEYTDAKESLLQAARKAPVAAL
GFRVQCNKWAIIVRLLLGEIPERTVFMQKGMEKALRPYFELTNAVRIGDLELFKSVAEKF
SSTFSSDRTNNLIVRLRHNVIRTGLRNISISYSRISLADVAKKLRLDSANPVADAESIVS
KAIRDGAIDATVDHANGWMVSKETGDIYSTNEPQLAFNSRIAFCLNMHNEAVRALRFPPN
SHKEKESAEKRRERQQQEQELAKHIAEEDDDEF
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 012934
(453 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2198561 - symbol:EMB2719 "EMBRYO DEFECTIVE 271... 1789 2.0e-184 1
TAIR|locus:2204385 - symbol:AT1G75990 species:3702 "Arabi... 1766 5.4e-182 1
UNIPROTKB|Q2KJ46 - symbol:PSMD3 "26S proteasome non-ATPas... 895 1.1e-89 1
UNIPROTKB|E2QUY7 - symbol:PSMD3 "Uncharacterized protein"... 895 1.1e-89 1
UNIPROTKB|O43242 - symbol:PSMD3 "26S proteasome non-ATPas... 895 1.1e-89 1
MGI|MGI:98858 - symbol:Psmd3 "proteasome (prosome, macrop... 895 1.1e-89 1
RGD|1311470 - symbol:Psmd3 "proteasome (prosome, macropai... 895 1.1e-89 1
ZFIN|ZDB-GENE-040426-1444 - symbol:psmd3 "proteasome (pro... 893 1.7e-89 1
UNIPROTKB|F1RXA7 - symbol:LOC100512253 "Uncharacterized p... 889 4.6e-89 1
FB|FBgn0261396 - symbol:Rpn3 "Regulatory particle non-ATP... 869 6.0e-87 1
DICTYBASE|DDB_G0288621 - symbol:psmD3 "26S proteasome non... 831 6.4e-83 1
UNIPROTKB|B4DT72 - symbol:PSMD3 "26S proteasome non-ATPas... 800 1.2e-79 1
ASPGD|ASPL0000036390 - symbol:AN10337 species:162425 "Eme... 782 1.0e-77 1
POMBASE|SPBC119.01 - symbol:rpn3 "19S proteasome regulato... 770 1.9e-76 1
UNIPROTKB|I3LL55 - symbol:I3LL55 "Uncharacterized protein... 730 3.2e-72 1
UNIPROTKB|G4NDR0 - symbol:MGG_00884 "26S proteasome non-A... 725 1.1e-71 1
GENEDB_PFALCIPARUM|MAL13P1.190 - symbol:MAL13P1.190 "prot... 690 5.6e-68 1
UNIPROTKB|Q8IDV2 - symbol:MAL13P1.190 "Proteasome regulat... 690 5.6e-68 1
WB|WBGene00004460 - symbol:rpn-3 species:6239 "Caenorhabd... 690 5.6e-68 1
UNIPROTKB|Q04908 - symbol:rpn-3 "26S proteasome non-ATPas... 690 5.6e-68 1
CGD|CAL0001433 - symbol:RPN3 species:5476 "Candida albica... 685 1.9e-67 1
UNIPROTKB|H9L061 - symbol:H9L061 "Uncharacterized protein... 462 2.3e-66 2
UNIPROTKB|H9L164 - symbol:H9L164 "Uncharacterized protein... 626 3.4e-61 1
SGD|S000000823 - symbol:RPN3 "non-ATPase regulatory subun... 533 2.4e-51 1
FB|FBgn0027055 - symbol:CSN3 "COP9 complex homolog subuni... 151 1.1e-07 1
DICTYBASE|DDB_G0291848 - symbol:csn3 "proteasome componen... 143 7.9e-07 1
UNIPROTKB|E2RD70 - symbol:COPS3 "Uncharacterized protein"... 143 8.0e-07 1
UNIPROTKB|Q9UNS2 - symbol:COPS3 "COP9 signalosome complex... 143 8.0e-07 1
MGI|MGI:1349409 - symbol:Cops3 "COP9 (constitutive photom... 143 8.0e-07 1
RGD|1303002 - symbol:Cops3 "COP9 signalosome subunit 3" s... 143 8.0e-07 1
UNIPROTKB|Q5ZJF1 - symbol:COPS3 "COP9 signalosome complex... 142 1.0e-06 1
UNIPROTKB|A6H7B5 - symbol:COPS3 "COP9 signalosome complex... 138 2.9e-06 1
ZFIN|ZDB-GENE-030131-7660 - symbol:cops3 "COP9 constituti... 137 3.7e-06 1
UNIPROTKB|F1SB16 - symbol:COPS3 "Uncharacterized protein"... 135 6.2e-06 1
TAIR|locus:2145638 - symbol:COP13 "AT5G14250" species:370... 119 0.00037 1
DICTYBASE|DDB_G0284241 - symbol:DDB_G0284241 "proteasome ... 116 0.00080 1
>TAIR|locus:2198561 [details] [associations]
symbol:EMB2719 "EMBRYO DEFECTIVE 2719" species:3702
"Arabidopsis thaliana" [GO:0000502 "proteasome complex"
evidence=IEA;IDA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008541
"proteasome regulatory particle, lid subcomplex" evidence=ISS]
[GO:0009793 "embryo development ending in seed dormancy"
evidence=NAS] [GO:0030234 "enzyme regulator activity" evidence=IEA]
[GO:0042176 "regulation of protein catabolic process" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=TAS] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0009506 "plasmodesma"
evidence=IDA] [GO:0006635 "fatty acid beta-oxidation" evidence=RCA]
[GO:0009407 "toxin catabolic process" evidence=RCA] [GO:0042023
"DNA endoreduplication" evidence=RCA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=RCA]
[GO:0043248 "proteasome assembly" evidence=RCA] [GO:0051510
"regulation of unidimensional cell growth" evidence=RCA]
[GO:0051788 "response to misfolded protein" evidence=RCA]
[GO:0080129 "proteasome core complex assembly" evidence=RCA]
InterPro:IPR000717 InterPro:IPR013586 Pfam:PF01399 Pfam:PF08375
SMART:SM00088 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005829
GO:GO:0005886 GO:GO:0009506 GO:GO:0030234 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0050790 GO:GO:0000502 GO:GO:0042176
EMBL:AC022472 InterPro:IPR013143 SMART:SM00753 EMBL:AY120740
IPI:IPI00528285 PIR:G86335 RefSeq:NP_173447.1 UniGene:At.15440
ProteinModelPortal:Q9LNU4 SMR:Q9LNU4 IntAct:Q9LNU4 STRING:Q9LNU4
PaxDb:Q9LNU4 PRIDE:Q9LNU4 ProMEX:Q9LNU4 EnsemblPlants:AT1G20200.1
GeneID:838609 KEGG:ath:AT1G20200 TAIR:At1g20200 eggNOG:NOG251646
HOGENOM:HOG000193909 InParanoid:Q9LNU4 KO:K03033 OMA:NYLSTSH
PhylomeDB:Q9LNU4 ProtClustDB:CLSN2682716 Genevestigator:Q9LNU4
GermOnline:AT1G20200 Uniprot:Q9LNU4
Length = 488
Score = 1789 (634.8 bits), Expect = 2.0e-184, P = 2.0e-184
Identities = 353/454 (77%), Positives = 389/454 (85%)
Query: 1 METGAHAREVRRIMRAVRLTMALRRKLKAPVLSAFLNFALAPGSEAHSRLLSYLPKEDEH 60
++TG++ +EVRRI RAVRLT+ LR+KL VLS+FL+FAL PGSEAHSRL S++PK DEH
Sbjct: 35 IDTGSYTKEVRRIARAVRLTIGLRQKLTGSVLSSFLDFALVPGSEAHSRLSSFVPKGDEH 94
Query: 61 EMEVDTASSGAPA-PAKHPLPELEIYCYLLVLIFLIDKKRYNEAKACSSASIARLKNMNR 119
+MEVDTASS A P+KH ELEIYCY +VL+FLID+K+YNEAKACSSASIARLKN+NR
Sbjct: 95 DMEVDTASSATQAAPSKHLPAELEIYCYFIVLLFLIDQKKYNEAKACSSASIARLKNVNR 154
Query: 120 RTVDVLAARLYFYYSLCYELTGDLAEIRGNLLALHRIATLRHDELGQETXXXXXXXXXXX 179
RT+DV+A+RLYFYYSL YE TGDLAEIRG LLALH ATLRHDELGQET
Sbjct: 155 RTIDVIASRLYFYYSLSYEQTGDLAEIRGTLLALHHSATLRHDELGQETLLNLLLRNYLH 214
Query: 180 XXXXDQAEKLRSKAPRFEAHSNQQFCRYLFYLGKIRTIQLEYTDAKESLLQAARKAPVAA 239
DQAEKLRSKAPRFEAHSNQQFCRYLFYLGKIRTIQLEYTDAKESLLQAARKAP+AA
Sbjct: 215 YNLYDQAEKLRSKAPRFEAHSNQQFCRYLFYLGKIRTIQLEYTDAKESLLQAARKAPIAA 274
Query: 240 LGFRVQCNKWAIIVRLLLGEIPERTVFMQKGMEKALRPYFELTNAVRIGDLELFKSVAEK 299
LGFR+QCNKWAI+VRLLLGEIPER++F QKGMEKALRPYFELTNAVRIGDLELF++V EK
Sbjct: 275 LGFRIQCNKWAILVRLLLGEIPERSIFTQKGMEKALRPYFELTNAVRIGDLELFRTVQEK 334
Query: 300 FSSTFSSDRTNNLIVRLRHNVIRTGLRNISISYSRISLADVAKKLRLDSANPVADAESIV 359
F TF+ DRT+NLIVRLRHNVIRTGLRNISISYSRISL DVAKKLRL+S NPVADAESIV
Sbjct: 335 FLDTFAQDRTHNLIVRLRHNVIRTGLRNISISYSRISLPDVAKKLRLNSENPVADAESIV 394
Query: 360 SKAIRDGAIDATVDHANGWMVSKETGDIYSTNEPQLAFNSRIAFCLNMHNEAVRALRFPP 419
+KAIRDGAIDAT+DH NG MVSKETGDIYSTNEPQ AFNSRIAFCLNMHNEAVRALRFPP
Sbjct: 395 AKAIRDGAIDATIDHKNGCMVSKETGDIYSTNEPQTAFNSRIAFCLNMHNEAVRALRFPP 454
Query: 420 NSHXXXXXXXXXXXXXXXXXXLAKHIAEEDDDEF 453
N+H LAKH+AEEDDD+F
Sbjct: 455 NTHKEKESDEKRRERKQQEEELAKHMAEEDDDDF 488
>TAIR|locus:2204385 [details] [associations]
symbol:AT1G75990 species:3702 "Arabidopsis thaliana"
[GO:0000502 "proteasome complex" evidence=IEA;IDA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008541 "proteasome regulatory
particle, lid subcomplex" evidence=ISS] [GO:0030234 "enzyme
regulator activity" evidence=IEA] [GO:0042176 "regulation of
protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0030163 "protein catabolic process" evidence=TAS] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0016020 "membrane"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0042023 "DNA
endoreduplication" evidence=RCA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=RCA]
[GO:0043248 "proteasome assembly" evidence=RCA] [GO:0051510
"regulation of unidimensional cell growth" evidence=RCA]
[GO:0051788 "response to misfolded protein" evidence=RCA]
InterPro:IPR000717 InterPro:IPR013586 Pfam:PF01399 Pfam:PF08375
SMART:SM00088 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005829
GO:GO:0005886 GO:GO:0030234 EMBL:AC007396 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0050790 GO:GO:0030163 GO:GO:0000502
GO:GO:0042176 InterPro:IPR013143 SMART:SM00753 eggNOG:NOG251646
HOGENOM:HOG000193909 KO:K03033 ProtClustDB:CLSN2682716
EMBL:AY057508 IPI:IPI00526971 PIR:E96788 RefSeq:NP_177726.1
UniGene:At.15402 ProteinModelPortal:Q9LQR8 SMR:Q9LQR8 IntAct:Q9LQR8
STRING:Q9LQR8 PaxDb:Q9LQR8 PRIDE:Q9LQR8 EnsemblPlants:AT1G75990.1
GeneID:843931 KEGG:ath:AT1G75990 TAIR:At1g75990 InParanoid:Q9LQR8
OMA:LKHDNET PhylomeDB:Q9LQR8 Genevestigator:Q9LQR8
GermOnline:AT1G75990 Uniprot:Q9LQR8
Length = 487
Score = 1766 (626.7 bits), Expect = 5.4e-182, P = 5.4e-182
Identities = 346/453 (76%), Positives = 386/453 (85%)
Query: 1 METGAHAREVRRIMRAVRLTMALRRKLKAPVLSAFLNFALAPGSEAHSRLLSYLPKEDEH 60
++TG++ +EVRRI RAVRLT+ LRRKL V+S+FL+FAL PGSEAH+RL S++PK DEH
Sbjct: 35 IDTGSYTKEVRRIARAVRLTVGLRRKLTGSVISSFLDFALVPGSEAHTRLSSFVPKSDEH 94
Query: 61 EMEVDTASSGAPAPAKHPLPELEIYCYLLVLIFLIDKKRYNEAKACSSASIARLKNMNRR 120
+MEVDTASS + AP KH ELEIYCY +VL+FLID+K+YNEAK CS+ASIARLK++NRR
Sbjct: 95 DMEVDTASSNSQAPPKHLPAELEIYCYFIVLLFLIDQKKYNEAKVCSTASIARLKSVNRR 154
Query: 121 TVDVLAARLYFYYSLCYELTGDLAEIRGNLLALHRIATLRHDELGQETXXXXXXXXXXXX 180
TVDV+A++LYFYYSL YELT DLAEIR LLALH ATLRHDELGQET
Sbjct: 155 TVDVIASKLYFYYSLSYELTNDLAEIRSTLLALHHSATLRHDELGQETLLNLLLRNYLHY 214
Query: 181 XXXDQAEKLRSKAPRFEAHSNQQFCRYLFYLGKIRTIQLEYTDAKESLLQAARKAPVAAL 240
DQAEKLRSKAPRFEAHSNQQFCRYLFYLGKIRTIQLEYTDAKESLLQAARKAPVA+L
Sbjct: 215 NLYDQAEKLRSKAPRFEAHSNQQFCRYLFYLGKIRTIQLEYTDAKESLLQAARKAPVASL 274
Query: 241 GFRVQCNKWAIIVRLLLGEIPERTVFMQKGMEKALRPYFELTNAVRIGDLELFKSVAEKF 300
GFR+QCNKWAIIVRLLLGEIPER++F QKGMEK LRPYFELTNAVRIGDLELF + EKF
Sbjct: 275 GFRIQCNKWAIIVRLLLGEIPERSIFTQKGMEKTLRPYFELTNAVRIGDLELFGKIQEKF 334
Query: 301 SSTFSSDRTNNLIVRLRHNVIRTGLRNISISYSRISLADVAKKLRLDSANPVADAESIVS 360
+ TF+ DRT+NLIVRLRHNVIRTGLRNISISYSRISL DVA+KLRL+SANPVADAESIV+
Sbjct: 335 AKTFAEDRTHNLIVRLRHNVIRTGLRNISISYSRISLQDVAQKLRLNSANPVADAESIVA 394
Query: 361 KAIRDGAIDATVDHANGWMVSKETGDIYSTNEPQLAFNSRIAFCLNMHNEAVRALRFPPN 420
KAIRDGAIDAT+DH NG MVSKETGDIYSTNEPQ AFNSRIAFCLNMHNEAVRALRFPPN
Sbjct: 395 KAIRDGAIDATIDHKNGCMVSKETGDIYSTNEPQTAFNSRIAFCLNMHNEAVRALRFPPN 454
Query: 421 SHXXXXXXXXXXXXXXXXXXLAKHIAEEDDDEF 453
+H LAK++AEEDDD+F
Sbjct: 455 THREKESEEKRREMKQQEEELAKYMAEEDDDDF 487
>UNIPROTKB|Q2KJ46 [details] [associations]
symbol:PSMD3 "26S proteasome non-ATPase regulatory subunit
3" species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0042176 "regulation of protein catabolic
process" evidence=IEA] [GO:0030234 "enzyme regulator activity"
evidence=IEA] InterPro:IPR000717 InterPro:IPR011990
InterPro:IPR013586 Pfam:PF01399 Pfam:PF08375 SMART:SM00088
GO:GO:0030234 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0050790
Gene3D:1.25.40.10 GO:GO:0042176 InterPro:IPR013143 SMART:SM00753
GO:GO:0022624 eggNOG:NOG251646 HOGENOM:HOG000193909 KO:K03033
EMBL:BC105526 IPI:IPI00707518 RefSeq:NP_001039365.1
UniGene:Bt.51586 ProteinModelPortal:Q2KJ46 STRING:Q2KJ46
PRIDE:Q2KJ46 Ensembl:ENSBTAT00000028608 GeneID:504937
KEGG:bta:504937 CTD:5709 GeneTree:ENSGT00490000043406
HOVERGEN:HBG000703 InParanoid:Q2KJ46 OMA:NQSVKAM OrthoDB:EOG4VHK6D
NextBio:20866898 Uniprot:Q2KJ46
Length = 534
Score = 895 (320.1 bits), Expect = 1.1e-89, P = 1.1e-89
Identities = 195/455 (42%), Positives = 278/455 (61%)
Query: 1 METGAHAREVRRIMRAVRLTMALRRKLKAPVLSAFLNFALAPGSEAHSRLLSYLPKEDEH 60
+E +E R ++RA+R+ + R+L VL ++ + LL +L + +
Sbjct: 82 LEKAVSGKEPRFVLRALRMLPSTSRRLNHYVLYKAVHGFFTSNNATRDFLLPFLEEPMDT 141
Query: 61 EMEVDTASSGAPAPAKHPLPELEIYCYLLVLIFLIDKKRYNEAKACSSASIARLKNMNRR 120
E ++ A + LPE+E Y LL++IFL++ KRY EA+ S + ++ NRR
Sbjct: 142 EADLQFRPRTGKAASAPLLPEVEAYLQLLMVIFLMNSKRYKEAQKISDDLMQKISTQNRR 201
Query: 121 TVDVLAARLYFYYSLCYELTGDLAEIRGNLLALHRIATLRHDELGQETXXXXXXXXXXXX 180
+D++AA+ Y+Y++ YE L +R L A R ATLRHD GQ T
Sbjct: 202 ALDLVAAKCYYYHARVYEFLDKLDVVRSFLHARLRTATLRHDTDGQATLLNLLLRNYLHY 261
Query: 181 XXXDQAEKLRSKAPRFEAHSNQQFCRYLFYLGKIRTIQLEYTDAKESLLQAARKAPV-AA 239
DQAEKL SK+ E +N ++ RYL+Y G+I+ IQLEY++A+ ++ A RKAP A
Sbjct: 262 SLYDQAEKLVSKSVFPEQANNNEWARYLYYTGRIKAIQLEYSEARRTMTNALRKAPQHTA 321
Query: 240 LGFRVQCNKWAIIVRLLLGEIPERTVFMQKGMEKALRPYFELTNAVRIGDLELFKSVAEK 299
+GF+ +K I+V LLLGEIP+R F Q ++++L PYF LT AVR G+L F V ++
Sbjct: 322 VGFKQTVHKLLIVVELLLGEIPDRLQFRQPSLKRSLMPYFLLTQAVRTGNLAKFNQVLDQ 381
Query: 300 FSSTFSSDRTNNLIVRLRHNVIRTGLRNISISYSRISLADVAKKLRLDSANPVADAESIV 359
F F +D T LI+RLRHNVI+TG+R IS+SYSRISLAD+A+KL+LDS DAE IV
Sbjct: 382 FGEKFQADGTYTLIIRLRHNVIKTGVRMISLSYSRISLADIAQKLQLDSPE---DAEFIV 438
Query: 360 SKAIRDGAIDATVDHANGWMVSKETGDIYSTNEPQLAFNSRIAFCLNMHNEAVRALRFPP 419
+KAIRDG I+A+++H G++ SKE DIYST EPQLAF+ RI+FCL++HN +V+A+RFPP
Sbjct: 439 AKAIRDGVIEASINHEKGYVQSKEMIDIYSTREPQLAFHQRISFCLDIHNMSVKAMRFPP 498
Query: 420 NSHXXXXXXXXXXXXXXXXXX-LAKHIAEEDDDEF 453
S+ AK +AE+DDD F
Sbjct: 499 KSYNKDLESAEERREREQQDLEFAKEMAEDDDDSF 533
>UNIPROTKB|E2QUY7 [details] [associations]
symbol:PSMD3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0022624 "proteasome accessory complex"
evidence=IEA] [GO:0042176 "regulation of protein catabolic process"
evidence=IEA] [GO:0030234 "enzyme regulator activity" evidence=IEA]
InterPro:IPR000717 InterPro:IPR011990 InterPro:IPR013586
Pfam:PF01399 Pfam:PF08375 SMART:SM00088 GO:GO:0030234
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0050790
Gene3D:1.25.40.10 GO:GO:0000502 GO:GO:0042176 InterPro:IPR013143
SMART:SM00753 KO:K03033 CTD:5709 GeneTree:ENSGT00490000043406
OMA:NQSVKAM EMBL:AAEX03006469 RefSeq:XP_548138.2
Ensembl:ENSCAFT00000025807 GeneID:491018 KEGG:cfa:491018
Uniprot:E2QUY7
Length = 534
Score = 895 (320.1 bits), Expect = 1.1e-89, P = 1.1e-89
Identities = 195/455 (42%), Positives = 278/455 (61%)
Query: 1 METGAHAREVRRIMRAVRLTMALRRKLKAPVLSAFLNFALAPGSEAHSRLLSYLPKEDEH 60
+E +E R ++RA+R+ + R+L VL ++ + LL +L + +
Sbjct: 82 LEKAVSGKEPRFVLRALRMLPSTSRRLNHYVLYKAVHGFFTSNNATRDFLLPFLEEPMDT 141
Query: 61 EMEVDTASSGAPAPAKHPLPELEIYCYLLVLIFLIDKKRYNEAKACSSASIARLKNMNRR 120
E ++ A + LPE+E Y LL++IFL++ KRY EA+ S + ++ NRR
Sbjct: 142 EADLQFRPRTGKAASAPLLPEVEAYLQLLMVIFLMNSKRYKEAQKISDDLMQKISTQNRR 201
Query: 121 TVDVLAARLYFYYSLCYELTGDLAEIRGNLLALHRIATLRHDELGQETXXXXXXXXXXXX 180
+D++AA+ Y+Y++ YE L +R L A R ATLRHD GQ T
Sbjct: 202 ALDLVAAKCYYYHARVYEFLDKLDVVRSFLHARLRTATLRHDADGQATLLNLLLRNYLHY 261
Query: 181 XXXDQAEKLRSKAPRFEAHSNQQFCRYLFYLGKIRTIQLEYTDAKESLLQAARKAPV-AA 239
DQAEKL SK+ E +N ++ RYL+Y G+I+ IQLEY++A+ ++ A RKAP A
Sbjct: 262 SLYDQAEKLVSKSVFPEQANNNEWARYLYYTGRIKAIQLEYSEARRTMTNALRKAPQHTA 321
Query: 240 LGFRVQCNKWAIIVRLLLGEIPERTVFMQKGMEKALRPYFELTNAVRIGDLELFKSVAEK 299
+GF+ +K I+V LLLGEIP+R F Q ++++L PYF LT AVR G+L F V ++
Sbjct: 322 VGFKQTVHKLLIVVELLLGEIPDRLQFRQPSLKRSLMPYFLLTQAVRTGNLAKFNQVLDQ 381
Query: 300 FSSTFSSDRTNNLIVRLRHNVIRTGLRNISISYSRISLADVAKKLRLDSANPVADAESIV 359
F F +D T LI+RLRHNVI+TG+R IS+SYSRISLAD+A+KL+LDS DAE IV
Sbjct: 382 FGEKFQADGTYTLIIRLRHNVIKTGVRMISLSYSRISLADIAQKLQLDSPE---DAEFIV 438
Query: 360 SKAIRDGAIDATVDHANGWMVSKETGDIYSTNEPQLAFNSRIAFCLNMHNEAVRALRFPP 419
+KAIRDG I+A+++H G++ SKE DIYST EPQLAF+ RI+FCL++HN +V+A+RFPP
Sbjct: 439 AKAIRDGVIEASINHEKGYVQSKEMIDIYSTREPQLAFHQRISFCLDIHNMSVKAMRFPP 498
Query: 420 NSHXXXXXXXXXXXXXXXXXX-LAKHIAEEDDDEF 453
S+ AK +AE+DDD F
Sbjct: 499 KSYNKDLESAEERREREQQDLEFAKEMAEDDDDSF 533
>UNIPROTKB|O43242 [details] [associations]
symbol:PSMD3 "26S proteasome non-ATPase regulatory subunit
3" species:9606 "Homo sapiens" [GO:0030234 "enzyme regulator
activity" evidence=IEA] [GO:0042176 "regulation of protein
catabolic process" evidence=IEA] [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0000502 "proteasome complex"
evidence=TAS] [GO:0000075 "cell cycle checkpoint" evidence=TAS]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=TAS]
[GO:0000084 "S phase of mitotic cell cycle" evidence=TAS]
[GO:0000209 "protein polyubiquitination" evidence=TAS] [GO:0000216
"M/G1 transition of mitotic cell cycle" evidence=TAS] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0002474 "antigen processing
and presentation of peptide antigen via MHC class I" evidence=TAS]
[GO:0002479 "antigen processing and presentation of exogenous
peptide antigen via MHC class I, TAP-dependent" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0006521 "regulation of cellular amino acid
metabolic process" evidence=TAS] [GO:0006915 "apoptotic process"
evidence=TAS] [GO:0006977 "DNA damage response, signal transduction
by p53 class mediator resulting in cell cycle arrest" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016032 "viral
reproduction" evidence=TAS] [GO:0016070 "RNA metabolic process"
evidence=TAS] [GO:0016071 "mRNA metabolic process" evidence=TAS]
[GO:0031145 "anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] Reactome:REACT_13505 Reactome:REACT_578
Reactome:REACT_71 Reactome:REACT_21257 Reactome:REACT_6850
Reactome:REACT_111217 InterPro:IPR000717 InterPro:IPR011990
InterPro:IPR013586 Pfam:PF01399 Pfam:PF08375 SMART:SM00088
GO:GO:0005829 Reactome:REACT_111102 Reactome:REACT_116125
Reactome:REACT_6900 GO:GO:0006915 GO:GO:0010467 GO:GO:0016071
Reactome:REACT_115566 GO:GO:0030234 GO:GO:0005654 GO:GO:0002479
GO:GO:0016032 Reactome:REACT_21300 GO:GO:0006977 GO:GO:0042981
GO:GO:0044281 GO:GO:0000082 EMBL:CH471152 Gene3D:1.10.10.10
InterPro:IPR011991 Gene3D:1.25.40.10 GO:GO:0051436 GO:GO:0000216
GO:GO:0042176 GO:GO:0000209 GO:GO:0000084 GO:GO:0031145
GO:GO:0051437 GO:GO:0006521 Reactome:REACT_383 InterPro:IPR013143
SMART:SM00753 GO:GO:0022624 eggNOG:NOG251646 HOGENOM:HOG000193909
KO:K03033 CTD:5709 HOVERGEN:HBG000703 OMA:NQSVKAM OrthoDB:EOG4VHK6D
EMBL:D67025 EMBL:BT007217 EMBL:AK022896 EMBL:BC000074 EMBL:BC004859
EMBL:BC012302 EMBL:BC020518 EMBL:BC025686 IPI:IPI00011603
RefSeq:NP_002800.2 UniGene:Hs.12970 ProteinModelPortal:O43242
DIP:DIP-27571N IntAct:O43242 MINT:MINT-5003834 STRING:O43242
PhosphoSite:O43242 PaxDb:O43242 PeptideAtlas:O43242 PRIDE:O43242
DNASU:5709 Ensembl:ENST00000264639 GeneID:5709 KEGG:hsa:5709
UCSC:uc002htn.1 GeneCards:GC17P038137 HGNC:HGNC:9560 HPA:CAB017038
neXtProt:NX_O43242 PharmGKB:PA38123 InParanoid:O43242
PhylomeDB:O43242 ChiTaRS:PSMD3 GenomeRNAi:5709 NextBio:22182
ArrayExpress:O43242 Bgee:O43242 CleanEx:HS_PSMD3
Genevestigator:O43242 GermOnline:ENSG00000108344 Uniprot:O43242
Length = 534
Score = 895 (320.1 bits), Expect = 1.1e-89, P = 1.1e-89
Identities = 195/455 (42%), Positives = 277/455 (60%)
Query: 1 METGAHAREVRRIMRAVRLTMALRRKLKAPVLSAFLNFALAPGSEAHSRLLSYLPKEDEH 60
+E +E R ++RA+R+ + R+L VL + + LL +L + +
Sbjct: 82 LEKAVSGKEPRFVLRALRMLPSTSRRLNHYVLYKAVQGFFTSNNATRDFLLPFLEEPMDT 141
Query: 61 EMEVDTASSGAPAPAKHPLPELEIYCYLLVLIFLIDKKRYNEAKACSSASIARLKNMNRR 120
E ++ A + LPE+E Y LLV+IF+++ KRY EA+ S + ++ NRR
Sbjct: 142 EADLQFRPRTGKAASTPLLPEVEAYLQLLVVIFMMNSKRYKEAQKISDDLMQKISTQNRR 201
Query: 121 TVDVLAARLYFYYSLCYELTGDLAEIRGNLLALHRIATLRHDELGQETXXXXXXXXXXXX 180
+D++AA+ Y+Y++ YE L +R L A R ATLRHD GQ T
Sbjct: 202 ALDLVAAKCYYYHARVYEFLDKLDVVRSFLHARLRTATLRHDADGQATLLNLLLRNYLHY 261
Query: 181 XXXDQAEKLRSKAPRFEAHSNQQFCRYLFYLGKIRTIQLEYTDAKESLLQAARKAPV-AA 239
DQAEKL SK+ E +N ++ RYL+Y G+I+ IQLEY++A+ ++ A RKAP A
Sbjct: 262 SLYDQAEKLVSKSVFPEQANNNEWARYLYYTGRIKAIQLEYSEARRTMTNALRKAPQHTA 321
Query: 240 LGFRVQCNKWAIIVRLLLGEIPERTVFMQKGMEKALRPYFELTNAVRIGDLELFKSVAEK 299
+GF+ +K I+V LLLGEIP+R F Q ++++L PYF LT AVR G+L F V ++
Sbjct: 322 VGFKQTVHKLLIVVELLLGEIPDRLQFRQPSLKRSLMPYFLLTQAVRTGNLAKFNQVLDQ 381
Query: 300 FSSTFSSDRTNNLIVRLRHNVIRTGLRNISISYSRISLADVAKKLRLDSANPVADAESIV 359
F F +D T LI+RLRHNVI+TG+R IS+SYSRISLAD+A+KL+LDS DAE IV
Sbjct: 382 FGEKFQADGTYTLIIRLRHNVIKTGVRMISLSYSRISLADIAQKLQLDSPE---DAEFIV 438
Query: 360 SKAIRDGAIDATVDHANGWMVSKETGDIYSTNEPQLAFNSRIAFCLNMHNEAVRALRFPP 419
+KAIRDG I+A+++H G++ SKE DIYST EPQLAF+ RI+FCL++HN +V+A+RFPP
Sbjct: 439 AKAIRDGVIEASINHEKGYVQSKEMIDIYSTREPQLAFHQRISFCLDIHNMSVKAMRFPP 498
Query: 420 NSHXXXXXXXXXXXXXXXXXX-LAKHIAEEDDDEF 453
S+ AK +AE+DDD F
Sbjct: 499 KSYNKDLESAEERREREQQDLEFAKEMAEDDDDSF 533
>MGI|MGI:98858 [details] [associations]
symbol:Psmd3 "proteasome (prosome, macropain) 26S subunit,
non-ATPase, 3" species:10090 "Mus musculus" [GO:0000502 "proteasome
complex" evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IDA] [GO:0030234 "enzyme regulator activity" evidence=IEA]
[GO:0042176 "regulation of protein catabolic process" evidence=IEA]
InterPro:IPR000717 InterPro:IPR011990 InterPro:IPR013586
Pfam:PF01399 Pfam:PF08375 SMART:SM00088 MGI:MGI:98858 GO:GO:0030234
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0050790 EMBL:CH466556
Gene3D:1.25.40.10 GO:GO:0042176 EMBL:AL590963 InterPro:IPR013143
SMART:SM00753 GO:GO:0022624 eggNOG:NOG251646 HOGENOM:HOG000193909
KO:K03033 CTD:5709 GeneTree:ENSGT00490000043406 HOVERGEN:HBG000703
OMA:NQSVKAM OrthoDB:EOG4VHK6D ChiTaRS:PSMD3 EMBL:M25149
EMBL:AK145488 EMBL:AK164593 EMBL:AK165520 EMBL:AK166683
EMBL:AK166714 EMBL:AK167285 EMBL:AK169690 EMBL:BC003197
IPI:IPI00314439 PIR:I49504 RefSeq:NP_033465.1 UniGene:Mm.12194
ProteinModelPortal:P14685 IntAct:P14685 STRING:P14685
PhosphoSite:P14685 PaxDb:P14685 PRIDE:P14685
Ensembl:ENSMUST00000017365 GeneID:22123 KEGG:mmu:22123
InParanoid:Q3TP95 NextBio:301989 Bgee:P14685 Genevestigator:P14685
GermOnline:ENSMUSG00000017221 Uniprot:P14685
Length = 530
Score = 895 (320.1 bits), Expect = 1.1e-89, P = 1.1e-89
Identities = 195/455 (42%), Positives = 278/455 (61%)
Query: 1 METGAHAREVRRIMRAVRLTMALRRKLKAPVLSAFLNFALAPGSEAHSRLLSYLPKEDEH 60
+E +E R ++RA+R+ + R+L VL ++ + LL +L + +
Sbjct: 78 LEKAVSGKEPRFVLRALRMLPSTSRRLNHYVLYKAVHGFFTSNNATRDFLLPFLEEPMDT 137
Query: 61 EMEVDTASSGAPAPAKHPLPELEIYCYLLVLIFLIDKKRYNEAKACSSASIARLKNMNRR 120
E ++ A + LPE+E Y LL++IFL++ KRY EA+ S + ++ NRR
Sbjct: 138 EADLQFRPRTGKAASAPLLPEVEAYLQLLMVIFLMNSKRYKEAQKISDDLMQKISTQNRR 197
Query: 121 TVDVLAARLYFYYSLCYELTGDLAEIRGNLLALHRIATLRHDELGQETXXXXXXXXXXXX 180
+D++AA+ Y+Y++ YE L +R L A R ATLRHD GQ T
Sbjct: 198 ALDLVAAKCYYYHARVYEFLDKLDVVRSFLHARLRTATLRHDADGQATLLNLLLRNYLHY 257
Query: 181 XXXDQAEKLRSKAPRFEAHSNQQFCRYLFYLGKIRTIQLEYTDAKESLLQAARKAPV-AA 239
DQAEKL SK+ E +N ++ RYL+Y G+I+ IQLEY++A+ ++ A RKAP A
Sbjct: 258 SLYDQAEKLVSKSVFPEQANNNEWARYLYYTGRIKAIQLEYSEARRTMTNALRKAPQHTA 317
Query: 240 LGFRVQCNKWAIIVRLLLGEIPERTVFMQKGMEKALRPYFELTNAVRIGDLELFKSVAEK 299
+GF+ +K I+V LLLGEIP+R F Q ++++L PYF LT AVR G+L F V ++
Sbjct: 318 VGFKQTVHKLLIVVELLLGEIPDRLQFRQPSLKRSLMPYFLLTQAVRTGNLAKFNQVLDQ 377
Query: 300 FSSTFSSDRTNNLIVRLRHNVIRTGLRNISISYSRISLADVAKKLRLDSANPVADAESIV 359
F F +D T LI+RLRHNVI+TG+R IS+SYSRISLAD+A+KL+LDS DAE IV
Sbjct: 378 FGEKFQTDGTYTLIIRLRHNVIKTGVRMISLSYSRISLADIAQKLQLDSPE---DAEFIV 434
Query: 360 SKAIRDGAIDATVDHANGWMVSKETGDIYSTNEPQLAFNSRIAFCLNMHNEAVRALRFPP 419
+KAIRDG I+A+++H G++ SKE DIYST EPQLAF+ RI+FCL++HN +V+A+RFPP
Sbjct: 435 AKAIRDGVIEASINHEKGYVQSKEMIDIYSTREPQLAFHQRISFCLDIHNMSVKAMRFPP 494
Query: 420 NSHXXXXXXXXXXXXXXXXXX-LAKHIAEEDDDEF 453
S+ AK +AE+DDD F
Sbjct: 495 KSYNKDLESAEERREREQQDLEFAKEMAEDDDDSF 529
>RGD|1311470 [details] [associations]
symbol:Psmd3 "proteasome (prosome, macropain) 26S subunit,
non-ATPase, 3" species:10116 "Rattus norvegicus" [GO:0022624
"proteasome accessory complex" evidence=IEA;ISO] [GO:0030234
"enzyme regulator activity" evidence=IEA] [GO:0042176 "regulation
of protein catabolic process" evidence=IEA] InterPro:IPR000717
InterPro:IPR011990 InterPro:IPR013586 Pfam:PF01399 Pfam:PF08375
SMART:SM00088 RGD:1311470 GO:GO:0030234 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0050790 Gene3D:1.25.40.10 GO:GO:0000502
GO:GO:0042176 EMBL:CH473948 InterPro:IPR013143 SMART:SM00753
eggNOG:NOG251646 HOGENOM:HOG000193909 KO:K03033 CTD:5709
GeneTree:ENSGT00490000043406 HOVERGEN:HBG000703 OMA:NQSVKAM
OrthoDB:EOG4VHK6D EMBL:BC085881 IPI:IPI00370009
RefSeq:NP_001008282.1 UniGene:Rn.101332 IntAct:Q5U2S7 STRING:Q5U2S7
Ensembl:ENSRNOT00000039836 GeneID:287670 KEGG:rno:287670
UCSC:RGD:1311470 InParanoid:Q5U2S7 NextBio:626775
Genevestigator:Q5U2S7 Uniprot:Q5U2S7
Length = 530
Score = 895 (320.1 bits), Expect = 1.1e-89, P = 1.1e-89
Identities = 195/455 (42%), Positives = 278/455 (61%)
Query: 1 METGAHAREVRRIMRAVRLTMALRRKLKAPVLSAFLNFALAPGSEAHSRLLSYLPKEDEH 60
+E +E R ++RA+R+ + R+L VL ++ + LL +L + +
Sbjct: 78 LEKAVSGKEPRFVLRALRMLPSTSRRLNHYVLYKAVHGFFTSNNATRDFLLPFLEEPMDT 137
Query: 61 EMEVDTASSGAPAPAKHPLPELEIYCYLLVLIFLIDKKRYNEAKACSSASIARLKNMNRR 120
E ++ A + LPE+E Y LL++IFL++ KRY EA+ S + ++ NRR
Sbjct: 138 EADLQFRPRTGKAASAPLLPEVEAYLQLLMVIFLMNSKRYKEAQKISDDLMQKISTQNRR 197
Query: 121 TVDVLAARLYFYYSLCYELTGDLAEIRGNLLALHRIATLRHDELGQETXXXXXXXXXXXX 180
+D++AA+ Y+Y++ YE L +R L A R ATLRHD GQ T
Sbjct: 198 ALDLVAAKCYYYHARVYEFLDKLDVVRSFLHARLRTATLRHDADGQATLLNLLLRNYLHY 257
Query: 181 XXXDQAEKLRSKAPRFEAHSNQQFCRYLFYLGKIRTIQLEYTDAKESLLQAARKAPV-AA 239
DQAEKL SK+ E +N ++ RYL+Y G+I+ IQLEY++A+ ++ A RKAP A
Sbjct: 258 SLYDQAEKLVSKSVFPEQANNNEWARYLYYTGRIKAIQLEYSEARRTMTNALRKAPQHTA 317
Query: 240 LGFRVQCNKWAIIVRLLLGEIPERTVFMQKGMEKALRPYFELTNAVRIGDLELFKSVAEK 299
+GF+ +K I+V LLLGEIP+R F Q ++++L PYF LT AVR G+L F V ++
Sbjct: 318 VGFKQTVHKLLIVVELLLGEIPDRLQFRQPSLKRSLMPYFLLTQAVRTGNLAKFNQVLDQ 377
Query: 300 FSSTFSSDRTNNLIVRLRHNVIRTGLRNISISYSRISLADVAKKLRLDSANPVADAESIV 359
F F +D T LI+RLRHNVI+TG+R IS+SYSRISLAD+A+KL+LDS DAE IV
Sbjct: 378 FGEKFQTDGTYTLIIRLRHNVIKTGVRMISLSYSRISLADIAQKLQLDSPE---DAEFIV 434
Query: 360 SKAIRDGAIDATVDHANGWMVSKETGDIYSTNEPQLAFNSRIAFCLNMHNEAVRALRFPP 419
+KAIRDG I+A+++H G++ SKE DIYST EPQLAF+ RI+FCL++HN +V+A+RFPP
Sbjct: 435 AKAIRDGVIEASINHEKGYVQSKEMIDIYSTREPQLAFHQRISFCLDIHNMSVKAMRFPP 494
Query: 420 NSHXXXXXXXXXXXXXXXXXX-LAKHIAEEDDDEF 453
S+ AK +AE+DDD F
Sbjct: 495 KSYNKDLESAEERREREQQDLEFAKEMAEDDDDSF 529
>ZFIN|ZDB-GENE-040426-1444 [details] [associations]
symbol:psmd3 "proteasome (prosome, macropain) 26S
subunit, non-ATPase, 3" species:7955 "Danio rerio" [GO:0030234
"enzyme regulator activity" evidence=IEA] [GO:0042176 "regulation
of protein catabolic process" evidence=IEA] [GO:0000502 "proteasome
complex" evidence=IEA] InterPro:IPR000717 InterPro:IPR011990
InterPro:IPR013586 Pfam:PF01399 Pfam:PF08375 SMART:SM00088
ZFIN:ZDB-GENE-040426-1444 GO:GO:0030234 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0050790 Gene3D:1.25.40.10 GO:GO:0000502
GO:GO:0042176 InterPro:IPR013143 SMART:SM00753 HOGENOM:HOG000193909
KO:K03033 CTD:5709 GeneTree:ENSGT00490000043406 HOVERGEN:HBG000703
EMBL:FP017234 EMBL:BC056598 EMBL:BC066451 IPI:IPI00507046
RefSeq:NP_956866.1 UniGene:Dr.13797 Ensembl:ENSDART00000027158
GeneID:393544 KEGG:dre:393544 InParanoid:Q6NYV1 NextBio:20814565
Uniprot:Q6NYV1
Length = 503
Score = 893 (319.4 bits), Expect = 1.7e-89, P = 1.7e-89
Identities = 196/455 (43%), Positives = 275/455 (60%)
Query: 1 METGAHAREVRRIMRAVRLTMALRRKLKAPVLSAFLNFALAPGSEAHSRLLSYLPKEDEH 60
+E +E R ++RA+R + R+L VL ++ + LL +L + E
Sbjct: 51 IEKAVSGKEPRFVLRALRALPSTSRRLNTNVLHKAVSGFFTANAAGKEFLLGFLEQPVEI 110
Query: 61 EMEVDTASSGAPAPAKHPLPELEIYCYLLVLIFLIDKKRYNEAKACSSASIARLKNMNRR 120
E +V A A +PE+E Y LL +++L + K Y EA+ S + ++ + NRR
Sbjct: 111 EGDVPFRPRTGKAAAVPLIPEVEAYLQLLTVVYLTNNKHYTEAQKVSDDLLQKIGSQNRR 170
Query: 121 TVDVLAARLYFYYSLCYELTGDLAEIRGNLLALHRIATLRHDELGQETXXXXXXXXXXXX 180
+D++AA+ Y+Y+S YE L +R L R ATLRHD GQ T
Sbjct: 171 ALDLVAAKCYYYHSRVYEFLNQLDVVRSFLHTRLRTATLRHDADGQATLLNLLLRNYLQY 230
Query: 181 XXXDQAEKLRSKAPRFEAHSNQQFCRYLFYLGKIRTIQLEYTDAKESLLQAARKAPV-AA 239
DQAEKL SK+ E +N ++ RYL+Y G+I+ IQLEY++A+ +L A RKAP A
Sbjct: 231 NLYDQAEKLVSKSVFPELANNNEWARYLYYTGRIKAIQLEYSEARRTLTNALRKAPQHTA 290
Query: 240 LGFRVQCNKWAIIVRLLLGEIPERTVFMQKGMEKALRPYFELTNAVRIGDLELFKSVAEK 299
+GF+ +K I+V LLLGEIP+R F Q ++++L PYF LT AVR G+L F V ++
Sbjct: 291 VGFKQTVHKLLIVVELLLGEIPDRLQFRQPSLKRSLMPYFLLTQAVRTGNLAKFNQVLDQ 350
Query: 300 FSSTFSSDRTNNLIVRLRHNVIRTGLRNISISYSRISLADVAKKLRLDSANPVADAESIV 359
F F +D T LI+RLRHNVI+TG+R IS+SYSRISLAD+A+KL+LDS DAE IV
Sbjct: 351 FGEKFQTDGTYTLIIRLRHNVIKTGVRMISLSYSRISLADIAQKLQLDSPE---DAEFIV 407
Query: 360 SKAIRDGAIDATVDHANGWMVSKETGDIYSTNEPQLAFNSRIAFCLNMHNEAVRALRFPP 419
+KAIRDG I+A+++H G++ SKET DIYST EPQLAF+ RIAFCL++HN +V+A+RFPP
Sbjct: 408 AKAIRDGVIEASINHEKGFVQSKETMDIYSTREPQLAFHQRIAFCLDIHNMSVKAMRFPP 467
Query: 420 NSHXXXXXXXXXXXXXXXXXX-LAKHIAEEDDDEF 453
++ AK +AE+DDD F
Sbjct: 468 KAYNKDLESAEERREREQQDLEFAKEMAEDDDDSF 502
>UNIPROTKB|F1RXA7 [details] [associations]
symbol:LOC100512253 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0042176 "regulation of protein catabolic process"
evidence=IEA] [GO:0030234 "enzyme regulator activity" evidence=IEA]
[GO:0000502 "proteasome complex" evidence=IEA] InterPro:IPR000717
InterPro:IPR013586 Pfam:PF01399 Pfam:PF08375 SMART:SM00088
GO:GO:0030234 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0050790
GO:GO:0000502 GO:GO:0042176 InterPro:IPR013143 SMART:SM00753
GeneTree:ENSGT00490000043406 OMA:NQSVKAM EMBL:CU928026
Ensembl:ENSSSCT00000019042 Uniprot:F1RXA7
Length = 536
Score = 889 (318.0 bits), Expect = 4.6e-89, P = 4.6e-89
Identities = 197/457 (43%), Positives = 278/457 (60%)
Query: 1 METGAHAREVRRIMRAVRLTMALRRKLKAPVLSAFLNFALAPGSEAHSRLLSYLPKEDEH 60
+E +E R ++RA+R+ + R+L VL ++ S LL +L + +
Sbjct: 82 LEKAVSGKEPRFVLRALRMLPSTSRRLNHYVLYKAVHGFFTSNSATRDFLLPFLEEPMDT 141
Query: 61 EMEVDTASSGAPAPAKHPLPELEIYCYLLVLIFLIDKKRYNEAKACSSASIARLKNMNRR 120
E ++ A + LPE+E Y LLV+IFL++ KRY EA+ S + ++ NRR
Sbjct: 142 EADLQFRPRTGKAASAPLLPEVEAYLQLLVVIFLMNSKRYKEAQKISDDLMQKISTQNRR 201
Query: 121 TVDVLAARLYFYYSLCYELTGDLAEIRGNLLALHRIATLRHDELGQETXXXXXXXXXXXX 180
+D++AA+ Y+Y++ YE L +R L A R ATLRHD GQ T
Sbjct: 202 ALDLVAAKCYYYHARVYEFLDKLDVVRSFLHARLRTATLRHDADGQATLLNLLLRNYLHY 261
Query: 181 XXXDQAEKLRSKAPRFEAHSNQQFCRYLFYL--GKIRTIQLEYTDAKESLLQAARKAPV- 237
DQAEKL SK+ E +N ++ RYL+Y G+I+ IQLEY++A+ ++ A RKAP
Sbjct: 262 NLYDQAEKLVSKSVFPEQANNNEWARYLYYTDPGRIKAIQLEYSEARRTMTNALRKAPQH 321
Query: 238 AALGFRVQCNKWAIIVRLLLGEIPERTVFMQKGMEKALRPYFELTNAVRIGDLELFKSVA 297
A+GF+ +K I+V LLLGEIP+R F Q ++++L PYF LT AVR G+L F V
Sbjct: 322 TAVGFKQTVHKLLIVVELLLGEIPDRLQFRQPSLKRSLMPYFLLTQAVRTGNLAKFNQVL 381
Query: 298 EKFSSTFSSDRTNNLIVRLRHNVIRTGLRNISISYSRISLADVAKKLRLDSANPVADAES 357
++F F +D T LI+RLRHNVI+TG+R IS+SYSRISLAD+A+KL+LDS DAE
Sbjct: 382 DQFGEKFQADGTYTLIIRLRHNVIKTGVRMISLSYSRISLADIAQKLQLDSPE---DAEF 438
Query: 358 IVSKAIRDGAIDATVDHANGWMVSKETGDIYSTNEPQLAFNSRIAFCLNMHNEAVRALRF 417
IV+KAIRDG I+A+++H G++ SKE DIYST EPQLAF+ RI+FCL++HN +V+A+RF
Sbjct: 439 IVAKAIRDGVIEASINHEKGYVQSKEMIDIYSTREPQLAFHQRISFCLDIHNMSVKAMRF 498
Query: 418 PPNSHXXXXXXXXXXXXXXXXXX-LAKHIAEEDDDEF 453
PP S+ AK +AE+DDD F
Sbjct: 499 PPKSYNKDLESAEERREREQQDLEFAKEMAEDDDDSF 535
>FB|FBgn0261396 [details] [associations]
symbol:Rpn3 "Regulatory particle non-ATPase 3" species:7227
"Drosophila melanogaster" [GO:0004175 "endopeptidase activity"
evidence=ISS;IDA] [GO:0000502 "proteasome complex" evidence=ISS]
[GO:0006508 "proteolysis" evidence=ISS;IDA] [GO:0008541 "proteasome
regulatory particle, lid subcomplex" evidence=ISS] [GO:0005838
"proteasome regulatory particle" evidence=ISS;IDA] [GO:0030234
"enzyme regulator activity" evidence=IEA] [GO:0042176 "regulation
of protein catabolic process" evidence=IEA] InterPro:IPR000717
InterPro:IPR011990 InterPro:IPR013586 Pfam:PF01399 Pfam:PF08375
SMART:SM00088 GO:GO:0030234 EMBL:AE014134 GO:GO:0006508
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0050790 GO:GO:0004175
Gene3D:1.25.40.10 GO:GO:0008541 GO:GO:0042176 InterPro:IPR013143
SMART:SM00753 BRENDA:3.4.25.1 eggNOG:NOG251646 KO:K03033
GeneTree:ENSGT00490000043406 OMA:NQSVKAM EMBL:M63010 EMBL:AY089337
EMBL:BT044249 PIR:JH0665 RefSeq:NP_477300.1 UniGene:Dm.4848
ProteinModelPortal:P25161 DIP:DIP-18295N IntAct:P25161
MINT:MINT-982894 STRING:P25161 PaxDb:P25161 PRIDE:P25161
EnsemblMetazoa:FBtr0302289 GeneID:35176 KEGG:dme:Dmel_CG42641
CTD:35176 FlyBase:FBgn0261396 InParanoid:Q8T460 OrthoDB:EOG4Z08MX
PhylomeDB:P25161 ChiTaRS:Rpn3 GenomeRNAi:35176 NextBio:792228
Bgee:P25161 GermOnline:CG10484 Uniprot:P25161
Length = 494
Score = 869 (311.0 bits), Expect = 6.0e-87, P = 6.0e-87
Identities = 199/457 (43%), Positives = 274/457 (59%)
Query: 1 METGAHAREVRRIMRAVRLTMALRRKLKAPVLSAFLNFA--LAPGSEAHSRLLSYLPKED 58
+E G ++E R I+R +R RRKL V F N A + P ++ +P +
Sbjct: 45 IEKGVASKESRFILRVLRNLPNTRRKLNGVV---FRNLAQSIYPAGADREAAVALMPAVE 101
Query: 59 EHEMEVDTASSGAPAPAKHPLPELEIYCYLLVLIFLIDKKRYNEAKACSSASIARLKNMN 118
+ E+ A K P+ E++ Y YLL+L+ LID A + A +A++ N
Sbjct: 102 KDATELPDVPKKQVA-TKAPIAEVDAYFYLLLLVKLIDASDLKRAGISADALMAKISIQN 160
Query: 119 RRTVDVLAARLYFYYSLCYELTGDLAEIRGNLLALHRIATLRHDELGQETXXXXXXXXXX 178
RRT+D++ A+ YFY+S EL L IR L A R ATLR+D GQ
Sbjct: 161 RRTLDLIGAKSYFYFSRVAELKNSLEGIRSFLHARLRTATLRNDFEGQAVLINCLLRNYL 220
Query: 179 XXXXXDQAEKLRSKAPRFEAHSNQQFCRYLFYLGKIRTIQLEYTDAKESLLQAARKAPV- 237
DQA+KL K+ E+ SN ++ R+L+YLG+I+ +LEY+DA + L+QA RK+P
Sbjct: 221 HYALYDQADKLVKKSVYPESASNNEWARFLYYLGRIKAAKLEYSDAHKHLVQALRKSPQH 280
Query: 238 AALGFRVQCNKWAIIVRLLLGEIPERTVFMQKGMEKALRPYFELTNAVRIGDLELFKSVA 297
AA+GFR K I+V LLLG IPER VF Q G+ ++L YF+LT AVR+G+L+ F V
Sbjct: 281 AAIGFRQTVQKLIIVVELLLGNIPERVVFRQAGLRQSLGAYFQLTQAVRLGNLKRFGDVV 340
Query: 298 EKFSSTFSSDRTNNLIVRLRHNVIRTGLRNISISYSRISLADVAKKLRLDSANPVADAES 357
++ F D T LI+RLRHNVI+T +R+I +SYSRIS D+AK+L LDSA DAE
Sbjct: 341 SQYGPKFQLDHTFTLIIRLRHNVIKTAIRSIGLSYSRISPQDIAKRLMLDSAE---DAEF 397
Query: 358 IVSKAIRDGAIDATVDHANGWMVSKETGDIYSTNEPQLAFNSRIAFCLNMHNEAVRALRF 417
IVSKAIRDG I+AT+D A +M SKE+ DIYST EPQLAF+ RI+FCLN+HN++V+A+R+
Sbjct: 398 IVSKAIRDGVIEATLDPAQNFMRSKESTDIYSTREPQLAFHERISFCLNLHNQSVKAMRY 457
Query: 418 PPNSHXXXXXXXXXXXXXXXXXX-LAKHIAEEDDDEF 453
PP S+ LAK +AE+D+D F
Sbjct: 458 PPKSYGKDLESAEERREREQQDLELAKEMAEDDEDGF 494
>DICTYBASE|DDB_G0288621 [details] [associations]
symbol:psmD3 "26S proteasome non-ATPase regulatory
subunit 3" species:44689 "Dictyostelium discoideum" [GO:0050790
"regulation of catalytic activity" evidence=IEA] [GO:0042176
"regulation of protein catabolic process" evidence=IEA] [GO:0030234
"enzyme regulator activity" evidence=IEA] [GO:0000502 "proteasome
complex" evidence=IEA;ISS] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0004175 "endopeptidase
activity" evidence=ISS] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR000717 InterPro:IPR013586 Pfam:PF01399
Pfam:PF08375 SMART:SM00088 dictyBase:DDB_G0288621 GO:GO:0030234
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0050790
GenomeReviews:CM000154_GR EMBL:AAFI02000119 GO:GO:0004175
GO:GO:0000502 GO:GO:0006511 InterPro:IPR000082 GO:GO:0042176
InterPro:IPR013143 SMART:SM00753 eggNOG:NOG251646 KO:K03033
OMA:NQSVKAM RefSeq:XP_001134521.1 STRING:Q1ZXD3 PRIDE:Q1ZXD3
EnsemblProtists:DDB0232980 GeneID:8626718 KEGG:ddi:DDB_G0288621
Uniprot:Q1ZXD3
Length = 504
Score = 831 (297.6 bits), Expect = 6.4e-83, P = 6.4e-83
Identities = 181/428 (42%), Positives = 268/428 (62%)
Query: 1 METGAHAREVRRIMRAVRLTMALRRKLKAPVLSAFLNFALAPGSEAHSR--LLSYLPKED 58
++ G +E+R I+ +R T ++R+KL VL+ +NFA + + A + LLS+L K D
Sbjct: 44 IDKGVDTKEMRFIISVLRQTQSIRKKLNYKVLNQIVNFAFSHQNHATKKNFLLSFL-KSD 102
Query: 59 EHEMEVDTASSG----APAPAKHPLP-ELEIYCYLLVLIFLIDKKRYNEAKACSSASIAR 113
M++D+ + P+ + L E+E Y +LLVLI+LID+K+Y +A CSSA +
Sbjct: 103 GSSMDIDSTTQAEKETTPSSSSSHLNIEVESYIHLLVLIYLIDQKKYEDATKCSSALMET 162
Query: 114 LKNMNRRTVDVLAARLYFYYSLCYELTGDLAEIRGNLLALHRIATLRHDELGQETXXXXX 173
+++ R T+ L+++++FYYSL YE+T +L E+R LL+ R ATLRH++ GQ T
Sbjct: 163 VQSNTRITLYPLSSKIFFYYSLSYEMTNNLHEVRSTLLSALRTATLRHNDEGQATIINLL 222
Query: 174 XXXXXXXXXXDQAEKLRSKAPRFEAHSNQQFCRYLFYLGKIRTIQLEYTDAKESLLQAAR 233
+QA+KL + E+ S+ QF RY +Y G+IR IQLEY ++ + L QA R
Sbjct: 223 LRNYLEYNLFEQADKLLANTQFPESASSNQFARYFYYQGRIRAIQLEYAESFKFLTQAIR 282
Query: 234 KAPV-AALGFRVQCNKWAIIVRLLLGEIPERTVFMQKGMEKALRPYFELTNAVRIGDLEL 292
KAP A GFR K IV+LL+GEIPER F QK ++ AL+PYF LT AVR+GDL
Sbjct: 283 KAPQNTAGGFRRTVYKLLSIVQLLMGEIPERNTFSQKQLKIALKPYFHLTEAVRVGDLGS 342
Query: 293 FKSVAEKFSSTFSSDRTNNLIVRLRHNVIRTGLRNISISYSRISLADVAKKLRLDSANPV 352
F E+ S F SD+T L+ RLR NVI+ GL+ ++ +YSRIS D+ KL+ D
Sbjct: 343 FNQALEQNSDIFKSDQTFTLVQRLRSNVIKAGLKKLNTAYSRISFNDICTKLKFDGTTQ- 401
Query: 353 ADAESIVSKAIRDGAIDATVDHANGWMVSKETGDIYSTNEPQLAFNSRIAFCLNMHNEAV 412
D I++K I+DG IDAT+++ G++ S+E D YST EP AF++RI CL +HN+++
Sbjct: 402 -DIMFIIAKTIKDGVIDATINYEGGYLQSRENIDAYSTQEPLHAFSNRIDICLKIHNDSL 460
Query: 413 RALRFPPN 420
+A+RF P+
Sbjct: 461 KAMRFHPD 468
>UNIPROTKB|B4DT72 [details] [associations]
symbol:PSMD3 "26S proteasome non-ATPase regulatory subunit
3" species:9606 "Homo sapiens" [GO:0030234 "enzyme regulator
activity" evidence=IEA] [GO:0042176 "regulation of protein
catabolic process" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR000717 InterPro:IPR013586 Pfam:PF01399
Pfam:PF08375 SMART:SM00088 GO:GO:0030234 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0050790 GO:GO:0000502 GO:GO:0042176
EMBL:AC090844 InterPro:IPR013143 SMART:SM00753 HOVERGEN:HBG000703
UniGene:Hs.12970 HGNC:HGNC:9560 ChiTaRS:PSMD3 EMBL:AK300081
IPI:IPI01014869 STRING:B4DT72 Ensembl:ENST00000541736
Uniprot:B4DT72
Length = 356
Score = 800 (286.7 bits), Expect = 1.2e-79, P = 1.2e-79
Identities = 166/336 (49%), Positives = 228/336 (67%)
Query: 79 LPELEIYCYLLVLIFLIDKKRYNEAKACSSASIARLKNMNRRTVDVLAARLYFYYSLCYE 138
LPE+E Y LLV+IF+++ KRY EA+ S + ++ NRR +D++AA+ Y+Y++ YE
Sbjct: 22 LPEVEAYLQLLVVIFMMNSKRYKEAQKISDDLMQKISTQNRRALDLVAAKCYYYHARVYE 81
Query: 139 LTGDLAEIRGNLLALHRIATLRHDELGQETXXXXXXXXXXXXXXXDQAEKLRSKAPRFEA 198
L +R L A R ATLRHD GQ T DQAEKL SK+ E
Sbjct: 82 FLDKLDVVRSFLHARLRTATLRHDADGQATLLNLLLRNYLHYSLYDQAEKLVSKSVFPEQ 141
Query: 199 HSNQQFCRYLFYLGKIRTIQLEYTDAKESLLQAARKAPV-AALGFRVQCNKWAIIVRLLL 257
+N ++ RYL+Y G+I+ IQLEY++A+ ++ A RKAP A+GF+ +K I+V LLL
Sbjct: 142 ANNNEWARYLYYTGRIKAIQLEYSEARRTMTNALRKAPQHTAVGFKQTVHKLLIVVELLL 201
Query: 258 GEIPERTVFMQKGMEKALRPYFELTNAVRIGDLELFKSVAEKFSSTFSSDRTNNLIVRLR 317
GEIP+R F Q ++++L PYF LT AVR G+L F V ++F F +D T LI+RLR
Sbjct: 202 GEIPDRLQFRQPSLKRSLMPYFLLTQAVRTGNLAKFNQVLDQFGEKFQADGTYTLIIRLR 261
Query: 318 HNVIRTGLRNISISYSRISLADVAKKLRLDSANPVADAESIVSKAIRDGAIDATVDHANG 377
HNVI+TG+R IS+SYSRISLAD+A+KL+LDS DAE IV+KAIRDG I+A+++H G
Sbjct: 262 HNVIKTGVRMISLSYSRISLADIAQKLQLDSPE---DAEFIVAKAIRDGVIEASINHEKG 318
Query: 378 WMVSKETGDIYSTNEPQLAFNSRIAFCLNMHNEAVR 413
++ SKE DIYST EPQLAF+ RI+FCL++HN +V+
Sbjct: 319 YVQSKEMIDIYSTREPQLAFHQRISFCLDIHNMSVK 354
>ASPGD|ASPL0000036390 [details] [associations]
symbol:AN10337 species:162425 "Emericella nidulans"
[GO:0000502 "proteasome complex" evidence=IEA] [GO:0042176
"regulation of protein catabolic process" evidence=IEA] [GO:0030234
"enzyme regulator activity" evidence=IEA] InterPro:IPR000717
InterPro:IPR013586 Pfam:PF01399 Pfam:PF08375 SMART:SM00088
GO:GO:0030234 EMBL:BN001306 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0050790 GO:GO:0000502 GO:GO:0042176 InterPro:IPR013143
SMART:SM00753 OMA:NYLSTSH EnsemblFungi:CADANIAT00010340
Uniprot:C8VJN4
Length = 641
Score = 782 (280.3 bits), Expect = 1.0e-77, P = 1.0e-77
Identities = 192/460 (41%), Positives = 262/460 (56%)
Query: 11 RRIMRAVRLTMALRRKLKAPVLSAFLNFALAPGSEAHSRLLSYL--PKEDEH-----EME 63
R +R +R A+R+++ + VL+ + A S S LL + P E+ ME
Sbjct: 180 RFTLRVLRSISAMRKQITSDVLAEAIVAAYPTSSATASFLLDAIDQPGASENVGSSSNME 239
Query: 64 VDTASSGAPAPAKHPLPELEIYCYLLVLIFLIDKKRYNEAKACSSASIARLKNMNRRTVD 123
V+ + P+ +K LPE++IY +LV I+L D+K + S+ I RL+ +NRRT+D
Sbjct: 240 VENDKT-KPS-SKEVLPEIDIYLSILVQIYLYDRKEIQKGAKFSTRLIERLRALNRRTLD 297
Query: 124 VLAARLYFYYSLCYELTGDL--------AEIRGNLLALHRIATLRHDELGQETXXXXXXX 175
LAAR+YFYYSL +E L IR LLA R A LR D Q T
Sbjct: 298 SLAARVYFYYSLFFEQIAPLPPSPAAAITSIRQPLLAALRTAVLRKDVDTQATVMTLLLR 357
Query: 176 XXXXXXXXDQAEKLRSKAPRFEAHSNQQFCRYLFYLGKIRTIQLEYTDAKESLLQAARKA 235
QA+ L S + SN Q RYL+YLG+IR IQL+YT+A L+ A RK+
Sbjct: 358 NYLSTSHISQADLLISHNQFPPSASNNQIARYLYYLGRIRAIQLQYTEAHGHLIGATRKS 417
Query: 236 PVA--ALGFRVQCNKWAIIVRLLLGEIPERTVFMQKGMEKALRPYFELTNAVRIGDLELF 293
P + A GF +K ++V LL+G+IP+R +F Q +E+AL PYF L AV +GDL+ F
Sbjct: 418 PASHSARGFYQASHKLLVVVELLMGDIPDRAIFRQAALERALHPYFLLVQAVSVGDLDGF 477
Query: 294 KSVAEKFSSTFSSDRTNNLIVRLRHNVIRTGLRNISISYSRISLADVAKKLRLDSANPVA 353
++ SSTF D T LI+RLR NVI+TG+R +S+SYSRISL D+ +L LDS
Sbjct: 478 LNIVNTHSSTFRKDGTYTLILRLRQNVIKTGIRMMSLSYSRISLRDICLRLGLDSEE--- 534
Query: 354 DAESIVSKAIRDGAIDATVDHANGWMVSKETGDIYSTNEPQLAFNSRIAFCLNMHNEAVR 413
AE IV+KAIRDG I+A++DH G+M SK+ GD+Y+T EP F+ RI CL +H+E+V+
Sbjct: 535 SAEYIVAKAIRDGVIEASLDHERGFMKSKDVGDVYATREPGEVFHERIRACLGLHDESVK 594
Query: 414 ALRFPPNSHXXXXXXXXXXXXXXXXXXLAKHIAEED-DDE 452
A+RFP N H LAK I E D DDE
Sbjct: 595 AMRFPMNQHRLELKSAQEARERERE--LAKEIQEGDIDDE 632
>POMBASE|SPBC119.01 [details] [associations]
symbol:rpn3 "19S proteasome regulatory subunit Rpn3"
species:4896 "Schizosaccharomyces pombe" [GO:0005634 "nucleus"
evidence=TAS] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0007346 "regulation of mitotic cell
cycle" evidence=IC] [GO:0008541 "proteasome regulatory particle,
lid subcomplex" evidence=ISO] [GO:0030234 "enzyme regulator
activity" evidence=IEA] [GO:0042176 "regulation of protein
catabolic process" evidence=IEA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=NAS]
InterPro:IPR000717 InterPro:IPR013586 Pfam:PF01399 Pfam:PF08375
SMART:SM00088 PomBase:SPBC119.01 GO:GO:0005634 GO:GO:0007346
GO:GO:0030234 GO:GO:0043161 EMBL:CU329671 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0050790 GenomeReviews:CU329671_GR
GO:GO:0008541 GO:GO:0042176 InterPro:IPR013143 SMART:SM00753
eggNOG:NOG251646 HOGENOM:HOG000193909 KO:K03033 OMA:NQSVKAM
PIR:T39299 RefSeq:NP_595282.2 ProteinModelPortal:O42897
IntAct:O42897 STRING:O42897 EnsemblFungi:SPBC119.01.1
GeneID:2540109 KEGG:spo:SPBC119.01 OrthoDB:EOG4350FR
NextBio:20801245 Uniprot:O42897
Length = 497
Score = 770 (276.1 bits), Expect = 1.9e-76, P = 1.9e-76
Identities = 175/417 (41%), Positives = 242/417 (58%)
Query: 8 REVRRIMRAVRLTMALRRKLKAPVLSAFLNFALAPGSEAHSRLLSYLPKEDEHEMEVDTA 67
R+ R + R++R T + +L A VL + + + + LL + + D++
Sbjct: 54 RDPRLVYRSLRTTSNICHRLNADVLGQLIKKYYSFDNSLKNELLELIDMPQNGD---DSS 110
Query: 68 SSGAPAPAKHPLPELEIYCYLLVLIFLIDKKRYNEAKACSSASIARLKNMNRRTVDVLAA 127
+S PE+++Y LL+ + L ++Y IARL++ +RRT+D +AA
Sbjct: 111 TSITNGNGNTIFPEVDMYLQLLLSMTLYYNEKYEVGAEYIKKVIARLQSYDRRTLDQIAA 170
Query: 128 RLYFYYSLCYELTGDLAEIRGNLLALHRIATLRHDELGQETXXXXXXXXXXXXXXXDQAE 187
+LYFYY L +E E R LL++HR A+LRHD Q DQA+
Sbjct: 171 KLYFYYILFFEKCNRSVECRNTLLSVHRTASLRHDSETQAMVLTLLLRNYIQFNLYDQAD 230
Query: 188 KLRSKAPRFEAHSNQQFCRYLFYLGKIRTIQLEYTDAKESLLQAARKAP--VAALGFRVQ 245
+L SK SN RY +YLG+IR IQL+YT A E L+ A RKAP V A+ F
Sbjct: 231 RLVSKTSFLTNASNNLAIRYQYYLGRIRAIQLDYTTAHEHLVSAIRKAPNTVYAVQFLEA 290
Query: 246 CNKWAIIVRLLLGEIPERTVFMQKGMEKALRPYFELTNAVRIGDLELFKSVAEKFSSTFS 305
K I+V+LL+GEIPER +F QK +EK L PY ++ AVRIGDL F K+ + F
Sbjct: 291 VYKLHIVVQLLMGEIPERRIFRQKSLEKTLVPYLRISQAVRIGDLCAFTDALSKYEAEFR 350
Query: 306 SDRTNNLIVRLRHNVIRTGLRNISISYSRISLADVAKKLRLDSANPVADAESIVSKAIRD 365
D LI RLRH VI+TGLR IS+SYSRISL DV KL LDS AE IV+K IRD
Sbjct: 351 FDGLYTLICRLRHTVIKTGLRMISLSYSRISLRDVCIKLGLDSEE---SAEYIVAKGIRD 407
Query: 366 GAIDATVDHANGWMVSKETGDIYSTNEPQLAFNSRIAFCLNMHNEAVRALRFPPNSH 422
G IDA++DH+N +M S E DIYST +PQ AF+ RI FCL +HN++++++R+P ++H
Sbjct: 408 GVIDASIDHSNAFMASNEAMDIYSTEQPQQAFHERIQFCLALHNDSIKSMRYPMDAH 464
>UNIPROTKB|I3LL55 [details] [associations]
symbol:I3LL55 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0042176 "regulation of protein catabolic process"
evidence=IEA] [GO:0030234 "enzyme regulator activity" evidence=IEA]
[GO:0000502 "proteasome complex" evidence=IEA] InterPro:IPR013586
Pfam:PF08375 GO:GO:0030234 GO:GO:0050790 GO:GO:0000502
GO:GO:0042176 InterPro:IPR013143 SMART:SM00753
GeneTree:ENSGT00490000043406 Ensembl:ENSSSCT00000026850 OMA:XAMRFPP
Uniprot:I3LL55
Length = 505
Score = 730 (262.0 bits), Expect = 3.2e-72, P = 3.2e-72
Identities = 170/425 (40%), Positives = 246/425 (57%)
Query: 1 METGAHAREVRRIMRAVRLTMALRRKLKAPVLSAFLNFALAPGSEAHSRLLSYLPKEDEH 60
+E +E R ++RA+R+ + R+L VL ++ S LL +L + +
Sbjct: 83 LEKAVSGKEPRFVLRALRMLPSTSRRLNHYVLYKAVHGFFTSNSATRDFLLPFLEEPMDT 142
Query: 61 EMEVDTASSGAPAPAKHPLPELEIYCYLLVLIFLIDKKRYNEAKACSSASIARLKNMNRR 120
E ++ A + LPE+E Y LLV+IFL++ KRY EA+ S + ++ NRR
Sbjct: 143 EADLQFRPRTGKAASAPLLPEVEAYLQLLVVIFLMNSKRYKEAQKISDDLMQKISTQNRR 202
Query: 121 TVDVLAARLYFYYSLCYELTGDLAEIRGNLLALHRIATLRHDELGQETXXXXXXXXXXXX 180
+D++AA+ Y+Y++ YE L +R L A R ATLRHD GQ T
Sbjct: 203 ALDLVAAKCYYYHARVYEFLDKLDVVRSFLHARLRTATLRHDADGQATLLNLLLRNYLHY 262
Query: 181 XXXDQAEKLRSKAPRFEAHSNQQFCRYLFYL--GKIRTIQLEYTDAKESLLQAARKAPV- 237
DQAEKL SK+ E +N ++ RYL+Y G+I+ IQLEY++A+ ++ A RKAP
Sbjct: 263 NLYDQAEKLVSKSVFPEQANNNEWARYLYYTDPGRIKAIQLEYSEARRTMTNALRKAPQH 322
Query: 238 AALGFRVQCNKWAIIVRLLLGEIPERTVFMQKGMEKALRPYFELTNAVRIGDLELFKSVA 297
A+GF+ +K I+V LLLGEIP ++++L PYF LT AVR G+L F V
Sbjct: 323 TAVGFKQTVHKLLIVVELLLGEIPX-------SLKRSLMPYFLLTQAVRTGNLAKFNQVL 375
Query: 298 EKFSSTFSSDRTNNLIVRLRHNVIRTGLRNISISYSRISLADVAKKLRLDSANPVADAES 357
++F F +D T LI+RLRHNVI+TG+R I + R S + K L V D +
Sbjct: 376 DQFGEKFQADGTYTLIIRLRHNVIKTGVRMIRLCRERQSCSGARK---LPEGESVRDPQ- 431
Query: 358 IVSKAIRDGAIDATVDHANGWMVSKETGDIYSTNEPQLAFNSRIAFCLNMHNEAVRALRF 417
AIRDG I+A+++H G++ SKE DIYST EPQLAF+ RI+FCL++HN +V+A+RF
Sbjct: 432 ----AIRDGVIEASINHEKGYVQSKEMIDIYSTREPQLAFHQRISFCLDIHNMSVKAMRF 487
Query: 418 PPNSH 422
PP S+
Sbjct: 488 PPKSY 492
>UNIPROTKB|G4NDR0 [details] [associations]
symbol:MGG_00884 "26S proteasome non-ATPase regulatory
subunit 3" species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000717 InterPro:IPR013586 Pfam:PF01399
Pfam:PF08375 SMART:SM00088 GO:GO:0030234 EMBL:CM001235
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0050790 GO:GO:0000502
GO:GO:0042176 InterPro:IPR013143 SMART:SM00753 KO:K03033
RefSeq:XP_003718082.1 EnsemblFungi:MGG_00884T0 GeneID:2674538
KEGG:mgr:MGG_00884 Uniprot:G4NDR0
Length = 557
Score = 725 (260.3 bits), Expect = 1.1e-71, P = 1.1e-71
Identities = 171/415 (41%), Positives = 236/415 (56%)
Query: 54 LPKEDEHEMEVD------TASSGAPAPAKHPLPELEIYCYLLVLIFLIDKKRYNEAKACS 107
L ++ EME+D + +S + +K +PE++I+ +L +FL D K+ S
Sbjct: 138 LGRQSGSEMEIDGEVKGQSKTSSSKKESKEIIPEIDIFMGILTQVFLYDSKQLERGAEFS 197
Query: 108 SASIARLKNMNRRTVDVLAARLYFYYSLCYELTGDL--------AEIRGNLLALHRIATL 159
R+ ++NRRT+D L+A++YFYYSL +E L IR LLA R A L
Sbjct: 198 QHLCERIHSLNRRTLDSLSAKVYFYYSLFFEKLAPLPPSPQSPSVSIRPTLLAALRTAVL 257
Query: 160 RHDELGQETXXXXXXXXXXXXXXXDQAEKLRSKAPRFEAHSNQQFCRYLFYLGKIRTIQL 219
R D Q + +QA+ L S E +N Q RYL+YLG+IR IQL
Sbjct: 258 RKDIDTQASVIVLLLRNYLATSHINQADLLVSHTQFPENAANNQVARYLYYLGRIRAIQL 317
Query: 220 EYTDAKESLLQAARKAPVA--ALGFRVQCNKWAIIVRLLLGEIPERTVFMQKGMEKALRP 277
YT+A E L A RKAP + A+GF K ++V LL+G+IP+R F Q +E+AL P
Sbjct: 318 RYTEAHEHLTAATRKAPSSNCAVGFSQTATKLLLVVELLMGDIPDRATFRQPTLEEALHP 377
Query: 278 YFELTNAVRIGDLELFKSVAEKFSSTFSSDRTNNLIVRLRHNVIRTGLRNISISYSRISL 337
YF L AVR+G+L+ F++ + TF D T LI+RLR NVIRTG+R +S+SYSRISL
Sbjct: 378 YFLLVQAVRVGNLDNFETTIADHADTFRKDGTYTLILRLRQNVIRTGIRMMSLSYSRISL 437
Query: 338 ADVAKKLRLDSANPVADAESIVSKAIRDGAIDATVDHANGWMVSKETGDIYSTNEPQLAF 397
D+ +L L S AE IV+KAIRDG I+AT+D +G+M SKE GD+Y+T EP AF
Sbjct: 438 RDICIRLHLGSEE---SAEYIVAKAIRDGVIEATLDREHGYMRSKEVGDVYATREPGEAF 494
Query: 398 NSRIAFCLNMHNEAVRALRFPPNSHXXXXXXXXXXXXXXXXXXLAKHIAEEDDDE 452
+ RI CL +H+E+V+A+RFP N H +AK I + D DE
Sbjct: 495 HDRIRACLALHDESVKAMRFPMNQHRLELKNAQEARERERE--MAKEIQDGDLDE 547
Score = 171 (65.3 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 44/146 (30%), Positives = 79/146 (54%)
Query: 9 EVRRIMRAVRLTMALRRKLKAPVLSAFLNFALAP---GSEAHSRLLSYLPKEDEH----- 60
+ R +RA+R ++R++L A +L+ + P +A +LL+ + K+D
Sbjct: 83 DARFTLRALRSISSIRKRLTADILAQAIAETFPPTAASGDAVKQLLASIGKQDVQLGRQS 142
Query: 61 --EMEVD------TASSGAPAPAKHPLPELEIYCYLLVLIFLIDKKRYNEAKACSSASIA 112
EME+D + +S + +K +PE++I+ +L +FL D K+ S
Sbjct: 143 GSEMEIDGEVKGQSKTSSSKKESKEIIPEIDIFMGILTQVFLYDSKQLERGAEFSQHLCE 202
Query: 113 RLKNMNRRTVDVLAARLYFYYSLCYE 138
R+ ++NRRT+D L+A++YFYYSL +E
Sbjct: 203 RIHSLNRRTLDSLSAKVYFYYSLFFE 228
>GENEDB_PFALCIPARUM|MAL13P1.190 [details] [associations]
symbol:MAL13P1.190 "proteasome regulatory
component, putative" species:5833 "Plasmodium falciparum"
[GO:0005838 "proteasome regulatory particle" evidence=ISS]
[GO:0004175 "endopeptidase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR000717 InterPro:IPR013586 Pfam:PF01399 Pfam:PF08375
SMART:SM00088 GO:GO:0030234 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0050790 GO:GO:0004175 GO:GO:0006511 GO:GO:0042176
EMBL:AL844509 InterPro:IPR013143 SMART:SM00753 GO:GO:0005838
HOGENOM:HOG000193909 KO:K03033 OMA:NQSVKAM RefSeq:XP_001350108.1
ProteinModelPortal:Q8IDV2 EnsemblProtists:MAL13P1.190:mRNA
GeneID:813745 KEGG:pfa:MAL13P1.190 EuPathDB:PlasmoDB:PF3D7_1338100
ProtClustDB:CLSZ2733770 Uniprot:Q8IDV2
Length = 503
Score = 690 (248.0 bits), Expect = 5.6e-68, P = 5.6e-68
Identities = 149/418 (35%), Positives = 241/418 (57%)
Query: 6 HAREVRRIMRAVRLTMALRRKLKAPVLSAFLNFALAPGSEAHSRLLSYLPKEDEH-EMEV 64
H + + ++ +RL++ + + P++ + ++ L Y+ +E E+
Sbjct: 52 HMLRMLKYIKNIRLSIKNDKNMSMPIIIYLIKRIFKENYPIYNILNKYMNIYEEGLYKEI 111
Query: 65 DTASSGAPAPAKHPLPELEIYCYLLVLIFLIDKKRYNEAKACSSASIARLKNMNRRTVDV 124
+ + LPELE++ YLL+L++L+D+K Y+E S+ I R+ +NRR++D
Sbjct: 112 SDFYNINEKTYMNCLPELEVFFYLLILLYLLDEKCYDEGMELSTIIINRINKINRRSLDY 171
Query: 125 LAARLYFYYSLCYELTGDLAEIRGNLLALHRIATLRHDELGQETXXXXXXXXXXXXXXXD 184
+ A++YFYYS +EL G L+++R LL ++R A L D + Q D
Sbjct: 172 INAKVYFYYSWIHELGGKLSQVRQKLLFIYRNACLHRDIMTQTVVVNLILRDYIKHNLYD 231
Query: 185 QAEKLRSKAPRFE-AHSNQQFCRYLFYLGKIRTIQLEYTDAKESLLQAARKAPV---AAL 240
A + SK E SN Q+ RYL+Y+GKI +QL+Y++A + QA RKAP +A
Sbjct: 232 LAVRFISKTSFPENLSSNAQYARYLYYIGKILAVQLDYSEAHRKITQALRKAPQHTQSAK 291
Query: 241 GFRVQCNKWAIIVRLLLGEIPERTVFMQKGMEKALRPYFELTNAVRIGDLELFKSVAEKF 300
GF++ K I+V LL+G+IP+R++F K M K L PY + +AVR GD+ F V +
Sbjct: 292 GFKLAATKMEIVVELLMGDIPDRSIFSNKIMYKKLIPYKHVVSAVRNGDINKFAQVMNNY 351
Query: 301 SSTFSSDRTNNLIVRLRHNVIRTGLRNISISYSRISLADVAKKLRLDSANPVADAESIVS 360
+ F D LI R+ HNVI+T LR I++SYSRIS+ D+ KK+ ++S+ D I +
Sbjct: 352 TDLFIHDGVYLLIKRIHHNVIKTALRIINLSYSRISINDIGKKIGIESS---LDVVGITA 408
Query: 361 KAIRDGAIDATVDHANGWMVSKETGDIYSTNEPQLAFNSRIAFCLNMHNEAVRALRFP 418
KAI DG I+ T+D+ N ++ SK DIY T +P F+ RIAFCL ++++A++A+++P
Sbjct: 409 KAIHDGVIEGTIDYENQYVESKSNSDIYITGDPMKTFHKRIAFCLQLYSDAIKAMQYP 466
>UNIPROTKB|Q8IDV2 [details] [associations]
symbol:MAL13P1.190 "Proteasome regulatory component,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] InterPro:IPR000717
InterPro:IPR013586 Pfam:PF01399 Pfam:PF08375 SMART:SM00088
GO:GO:0030234 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0050790
GO:GO:0004175 GO:GO:0006511 GO:GO:0042176 EMBL:AL844509
InterPro:IPR013143 SMART:SM00753 GO:GO:0005838 HOGENOM:HOG000193909
KO:K03033 OMA:NQSVKAM RefSeq:XP_001350108.1
ProteinModelPortal:Q8IDV2 EnsemblProtists:MAL13P1.190:mRNA
GeneID:813745 KEGG:pfa:MAL13P1.190 EuPathDB:PlasmoDB:PF3D7_1338100
ProtClustDB:CLSZ2733770 Uniprot:Q8IDV2
Length = 503
Score = 690 (248.0 bits), Expect = 5.6e-68, P = 5.6e-68
Identities = 149/418 (35%), Positives = 241/418 (57%)
Query: 6 HAREVRRIMRAVRLTMALRRKLKAPVLSAFLNFALAPGSEAHSRLLSYLPKEDEH-EMEV 64
H + + ++ +RL++ + + P++ + ++ L Y+ +E E+
Sbjct: 52 HMLRMLKYIKNIRLSIKNDKNMSMPIIIYLIKRIFKENYPIYNILNKYMNIYEEGLYKEI 111
Query: 65 DTASSGAPAPAKHPLPELEIYCYLLVLIFLIDKKRYNEAKACSSASIARLKNMNRRTVDV 124
+ + LPELE++ YLL+L++L+D+K Y+E S+ I R+ +NRR++D
Sbjct: 112 SDFYNINEKTYMNCLPELEVFFYLLILLYLLDEKCYDEGMELSTIIINRINKINRRSLDY 171
Query: 125 LAARLYFYYSLCYELTGDLAEIRGNLLALHRIATLRHDELGQETXXXXXXXXXXXXXXXD 184
+ A++YFYYS +EL G L+++R LL ++R A L D + Q D
Sbjct: 172 INAKVYFYYSWIHELGGKLSQVRQKLLFIYRNACLHRDIMTQTVVVNLILRDYIKHNLYD 231
Query: 185 QAEKLRSKAPRFE-AHSNQQFCRYLFYLGKIRTIQLEYTDAKESLLQAARKAPV---AAL 240
A + SK E SN Q+ RYL+Y+GKI +QL+Y++A + QA RKAP +A
Sbjct: 232 LAVRFISKTSFPENLSSNAQYARYLYYIGKILAVQLDYSEAHRKITQALRKAPQHTQSAK 291
Query: 241 GFRVQCNKWAIIVRLLLGEIPERTVFMQKGMEKALRPYFELTNAVRIGDLELFKSVAEKF 300
GF++ K I+V LL+G+IP+R++F K M K L PY + +AVR GD+ F V +
Sbjct: 292 GFKLAATKMEIVVELLMGDIPDRSIFSNKIMYKKLIPYKHVVSAVRNGDINKFAQVMNNY 351
Query: 301 SSTFSSDRTNNLIVRLRHNVIRTGLRNISISYSRISLADVAKKLRLDSANPVADAESIVS 360
+ F D LI R+ HNVI+T LR I++SYSRIS+ D+ KK+ ++S+ D I +
Sbjct: 352 TDLFIHDGVYLLIKRIHHNVIKTALRIINLSYSRISINDIGKKIGIESS---LDVVGITA 408
Query: 361 KAIRDGAIDATVDHANGWMVSKETGDIYSTNEPQLAFNSRIAFCLNMHNEAVRALRFP 418
KAI DG I+ T+D+ N ++ SK DIY T +P F+ RIAFCL ++++A++A+++P
Sbjct: 409 KAIHDGVIEGTIDYENQYVESKSNSDIYITGDPMKTFHKRIAFCLQLYSDAIKAMQYP 466
>WB|WBGene00004460 [details] [associations]
symbol:rpn-3 species:6239 "Caenorhabditis elegans"
[GO:0000502 "proteasome complex" evidence=IEA] [GO:0030234 "enzyme
regulator activity" evidence=IEA] [GO:0042176 "regulation of
protein catabolic process" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0002119 "nematode
larval development" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] [GO:0006915 "apoptotic process" evidence=IMP]
InterPro:IPR000717 InterPro:IPR013586 Pfam:PF01399 Pfam:PF08375
SMART:SM00088 GO:GO:0008340 GO:GO:0009792 GO:GO:0040007
GO:GO:0006915 GO:GO:0030234 GO:GO:0002119 GO:GO:0000003
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0050790 GO:GO:0000502
GO:GO:0042176 InterPro:IPR013143 SMART:SM00753 eggNOG:NOG251646
HOGENOM:HOG000193909 KO:K03033 GeneTree:ENSGT00490000043406
OMA:NQSVKAM EMBL:FO080722 PIR:S44783 RefSeq:NP_498869.1
ProteinModelPortal:Q04908 DIP:DIP-25350N IntAct:Q04908
MINT:MINT-211615 STRING:Q04908 PaxDb:Q04908
EnsemblMetazoa:C30C11.2.1 EnsemblMetazoa:C30C11.2.2 GeneID:176196
KEGG:cel:CELE_C30C11.2 UCSC:C30C11.2 CTD:176196 WormBase:C30C11.2
InParanoid:Q04908 NextBio:891536 Uniprot:Q04908
Length = 504
Score = 690 (248.0 bits), Expect = 5.6e-68, P = 5.6e-68
Identities = 168/458 (36%), Positives = 246/458 (53%)
Query: 9 EVRRIMRAVRLTMALRRKLKAPVLSAFLNFALAPGSEAHSRLLSYL---PKEDEHEMEVD 65
E I R +++ R+++ VL ++ L+ ++ +L YL P D +D
Sbjct: 50 EEHLITRVLQVLPKTRKQINDNVLYKLVSSHLSSDAQFAEGMLKYLHYTPAADTEVQPMD 109
Query: 66 TASSGAPAPAK--HPL---PELEIYCYLLVLIFLIDKKRYNEAKACSSASIARLKNMNRR 120
T++ +P K P+ PE + Y LLVL+ L +K+ EA A + + N +RR
Sbjct: 110 TSNVKTKSPKKGVKPVFASPESDCYLRLLVLLHLYAQKKNTEALALGENQLTSIYNFDRR 169
Query: 121 TVDVLAARLYFYYSLCYELTGDLAEIRGNLLALHRIATLRHDELGQETXXXXXXXXXXXX 180
T+D LAA+ ++ + YE G L + +G L + R ATLR+ Q
Sbjct: 170 TLDGLAAKTLYFLCVIYEREGRLFDHQGFLNSRLRTATLRNFSESQAVLICWLLRCYLIN 229
Query: 181 XXXDQAEKLRSKAPRFEAHSNQQFCRYLFYLGKIRTIQLEYTDAKESLLQAARKAPV-AA 239
A L SK + SN RY++Y G+I+ +QL+Y A LQA RKAP A
Sbjct: 230 RQYQSAAHLVSKVAFPDNASNNDLARYMYYQGRIKALQLDYNSAAGYFLQAQRKAPQEGA 289
Query: 240 LGFRVQCNKWAIIVRLLLGEIPERTVFMQKGMEKALRPYFELTNAVRIGDLELFKSVAEK 299
+GF+ KW +++ LL GEIP+R+VF Q K L Y +L+ VR GD+ F E+
Sbjct: 290 IGFKQAVQKWVVVIGLLQGEIPDRSVFRQPIYRKCLAHYLDLSRGVRDGDVARFNHNLEQ 349
Query: 300 FSSTFSSDRTNNLIVRLRHNVIRTGLRNISISYSRISLADVAKKLRLDSANPVADAESIV 359
F + F +D T LIVRLR NVI+T ++ IS++YSRI + D+AKKL + + + E IV
Sbjct: 350 FKTQFEADDTLTLIVRLRQNVIKTAIKQISLAYSRIYIKDIAKKLYITNET---ETEYIV 406
Query: 360 SKAIRDGAIDATV--DHANG--WMVSKETGDIYSTNEPQLAFNSRIAFCLNMHNEAVRAL 415
+KAI DGAIDA + D +G +M S ET DIY T+EPQ F++RI +CL +HN+AV+AL
Sbjct: 407 AKAIADGAIDAVITSDVRDGPRYMQSSETADIYRTSEPQAHFDTRIRYCLELHNQAVKAL 466
Query: 416 RFPPNSHXXXXXXXXXXXXXXXXXXLAKHIAEEDDDEF 453
R+PP AK +A+EDDD+F
Sbjct: 467 RYPPKKKIAVETIEQAREREQQELEFAKELADEDDDDF 504
>UNIPROTKB|Q04908 [details] [associations]
symbol:rpn-3 "26S proteasome non-ATPase regulatory subunit
3" species:6239 "Caenorhabditis elegans" [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR000717 InterPro:IPR013586
Pfam:PF01399 Pfam:PF08375 SMART:SM00088 GO:GO:0008340 GO:GO:0009792
GO:GO:0040007 GO:GO:0006915 GO:GO:0030234 GO:GO:0002119
GO:GO:0000003 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0050790
GO:GO:0000502 GO:GO:0042176 InterPro:IPR013143 SMART:SM00753
eggNOG:NOG251646 HOGENOM:HOG000193909 KO:K03033
GeneTree:ENSGT00490000043406 OMA:NQSVKAM EMBL:FO080722 PIR:S44783
RefSeq:NP_498869.1 ProteinModelPortal:Q04908 DIP:DIP-25350N
IntAct:Q04908 MINT:MINT-211615 STRING:Q04908 PaxDb:Q04908
EnsemblMetazoa:C30C11.2.1 EnsemblMetazoa:C30C11.2.2 GeneID:176196
KEGG:cel:CELE_C30C11.2 UCSC:C30C11.2 CTD:176196 WormBase:C30C11.2
InParanoid:Q04908 NextBio:891536 Uniprot:Q04908
Length = 504
Score = 690 (248.0 bits), Expect = 5.6e-68, P = 5.6e-68
Identities = 168/458 (36%), Positives = 246/458 (53%)
Query: 9 EVRRIMRAVRLTMALRRKLKAPVLSAFLNFALAPGSEAHSRLLSYL---PKEDEHEMEVD 65
E I R +++ R+++ VL ++ L+ ++ +L YL P D +D
Sbjct: 50 EEHLITRVLQVLPKTRKQINDNVLYKLVSSHLSSDAQFAEGMLKYLHYTPAADTEVQPMD 109
Query: 66 TASSGAPAPAK--HPL---PELEIYCYLLVLIFLIDKKRYNEAKACSSASIARLKNMNRR 120
T++ +P K P+ PE + Y LLVL+ L +K+ EA A + + N +RR
Sbjct: 110 TSNVKTKSPKKGVKPVFASPESDCYLRLLVLLHLYAQKKNTEALALGENQLTSIYNFDRR 169
Query: 121 TVDVLAARLYFYYSLCYELTGDLAEIRGNLLALHRIATLRHDELGQETXXXXXXXXXXXX 180
T+D LAA+ ++ + YE G L + +G L + R ATLR+ Q
Sbjct: 170 TLDGLAAKTLYFLCVIYEREGRLFDHQGFLNSRLRTATLRNFSESQAVLICWLLRCYLIN 229
Query: 181 XXXDQAEKLRSKAPRFEAHSNQQFCRYLFYLGKIRTIQLEYTDAKESLLQAARKAPV-AA 239
A L SK + SN RY++Y G+I+ +QL+Y A LQA RKAP A
Sbjct: 230 RQYQSAAHLVSKVAFPDNASNNDLARYMYYQGRIKALQLDYNSAAGYFLQAQRKAPQEGA 289
Query: 240 LGFRVQCNKWAIIVRLLLGEIPERTVFMQKGMEKALRPYFELTNAVRIGDLELFKSVAEK 299
+GF+ KW +++ LL GEIP+R+VF Q K L Y +L+ VR GD+ F E+
Sbjct: 290 IGFKQAVQKWVVVIGLLQGEIPDRSVFRQPIYRKCLAHYLDLSRGVRDGDVARFNHNLEQ 349
Query: 300 FSSTFSSDRTNNLIVRLRHNVIRTGLRNISISYSRISLADVAKKLRLDSANPVADAESIV 359
F + F +D T LIVRLR NVI+T ++ IS++YSRI + D+AKKL + + + E IV
Sbjct: 350 FKTQFEADDTLTLIVRLRQNVIKTAIKQISLAYSRIYIKDIAKKLYITNET---ETEYIV 406
Query: 360 SKAIRDGAIDATV--DHANG--WMVSKETGDIYSTNEPQLAFNSRIAFCLNMHNEAVRAL 415
+KAI DGAIDA + D +G +M S ET DIY T+EPQ F++RI +CL +HN+AV+AL
Sbjct: 407 AKAIADGAIDAVITSDVRDGPRYMQSSETADIYRTSEPQAHFDTRIRYCLELHNQAVKAL 466
Query: 416 RFPPNSHXXXXXXXXXXXXXXXXXXLAKHIAEEDDDEF 453
R+PP AK +A+EDDD+F
Sbjct: 467 RYPPKKKIAVETIEQAREREQQELEFAKELADEDDDDF 504
>CGD|CAL0001433 [details] [associations]
symbol:RPN3 species:5476 "Candida albicans" [GO:0008541
"proteasome regulatory particle, lid subcomplex" evidence=IEA]
InterPro:IPR000717 InterPro:IPR013586 Pfam:PF01399 Pfam:PF08375
SMART:SM00088 CGD:CAL0001433 GO:GO:0030234 EMBL:AACQ01000017
EMBL:AACQ01000015 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0050790 GO:GO:0000502 GO:GO:0042176 InterPro:IPR013143
SMART:SM00753 eggNOG:NOG251646 KO:K03033 RefSeq:XP_721281.1
RefSeq:XP_721552.1 ProteinModelPortal:Q5AHZ8 STRING:Q5AHZ8
GeneID:3636917 GeneID:3637147 KEGG:cal:CaO19.10572
KEGG:cal:CaO19.3054 Uniprot:Q5AHZ8
Length = 481
Score = 685 (246.2 bits), Expect = 1.9e-67, P = 1.9e-67
Identities = 168/448 (37%), Positives = 235/448 (52%)
Query: 11 RRIMRAVRLTMALRRKLKA---PVLSAFLNFALAPGSEAHSRLLSYLPKEDEHEMEVDTA 67
R + + R LRRKL VL+ +N + + LL YL +E
Sbjct: 45 RYVSKVFRDLGPLRRKLVRNGNSVLATVINNTYPQTHNSKTYLLKYL-----NESPTSVG 99
Query: 68 SSGAPAPAKHPLPELEIYCYLLVLIFLIDKKRYNEAKACSSASIARLKNMNRRTVDVLAA 127
+ +PE+E+Y +LLV ++L+D + E + + +K+ NRR++D + A
Sbjct: 100 NDAMDVDNTTLIPEIELYIHLLVQVYLLDTGKLEELNSLGEHVVQLMKSFNRRSLDFIQA 159
Query: 128 RLYFYYSLCYELTGDLAEIRGNLLALHRIATLRHDELGQETXXXXXXXXXXXXXXXDQAE 187
+++FY EL GDL IR L R ATLRHD + QA
Sbjct: 160 KVWFYVCRAKELIGDLYSIRPELSYSLRTATLRHDIETTASVITLLLRNYLLTHDISQAS 219
Query: 188 KLRSKAPRFEAHSNQQFCRYLFYLGKIRTIQLEYTDAKESLLQAARKAPVAAL--GFRVQ 245
L K E N RY +YL +I IQL+Y+ A E ++ A RKAP +L GF
Sbjct: 220 DLVEKVEFPENAGNALVARYYYYLARINAIQLDYSTANECVITAIRKAPQTSLANGFVQA 279
Query: 246 CNKWAIIVRLLLGEIPERTVFMQKGMEKALRPYFELTNAVRIGDLELFKSVAEKFSSTFS 305
K +I++ LL+G+IPE VF K L PYF +T AVR+GD++LF V KF + F
Sbjct: 280 ATKLSIVIELLMGDIPELKVFKNKSGN--LEPYFNVTKAVRLGDIKLFGEVLHKFEADFK 337
Query: 306 SDRTNNLIVRLRHNVIRTGLRNISISYSRISLADVAKKLRLDSANPVADAESIVSKAIRD 365
D L+ RLR NVI+TG+R IS+SYS+ISL D+ KL LDS E IVSKAIRD
Sbjct: 338 KDDNFTLVSRLRQNVIKTGIRIISLSYSKISLKDICIKLHLDSEE---STEYIVSKAIRD 394
Query: 366 GAIDATVDHANGWMVSKETGDIYSTNEPQLAFNSRIAFCLNMHNEAVRALRFPPNSHXXX 425
G I+A+++H G+M SKE D+YST PQ F+ RI FCL++HNE+V+++R+P ++
Sbjct: 395 GVIEASINHQKGYMQSKELLDVYSTKLPQAEFDQRIKFCLSLHNESVKSMRYPNDNEKEN 454
Query: 426 XXXXXXXXXXXXXXXLAKHIAEEDDDEF 453
L K I E D D+F
Sbjct: 455 TNKEIEPSEEVE---LLKAIEEGDLDDF 479
>UNIPROTKB|H9L061 [details] [associations]
symbol:H9L061 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0030234 "enzyme regulator activity"
evidence=IEA] [GO:0042176 "regulation of protein catabolic process"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IEA] InterPro:IPR013586 Pfam:PF08375 GO:GO:0030234
GO:GO:0050790 GO:GO:0000502 GO:GO:0042176 InterPro:IPR013143
SMART:SM00753 GeneTree:ENSGT00490000043406 OMA:NQSVKAM
EMBL:AADN02050853 EMBL:AADN02050851 EMBL:AADN02050852
Ensembl:ENSGALT00000021992 Uniprot:H9L061
Length = 512
Score = 462 (167.7 bits), Expect = 2.3e-66, Sum P(2) = 2.3e-66
Identities = 106/283 (37%), Positives = 158/283 (55%)
Query: 1 METGAHAREVRRIMRAVRLTMALRRKLKAPVLSAFLNFALAPGSEAHSRLLSYLPKEDEH 60
+E +E R ++RA+R + R+L A VL +N LL +L + +
Sbjct: 66 LEKAVAGKEPRYVLRALRALPSTSRRLNANVLHKAVNGFFTSNGAVRDFLLGFLEEPMDT 125
Query: 61 EMEVDTASSGAPAPAKHPLPELEIYCYLLVLIFLIDKKRYNEAKACSSASIARLKNMNRR 120
E E+ A + LPE+E Y LL++I+L++ KRY EA+ S + ++ + NRR
Sbjct: 126 EAELQFRPRMGKAASAPLLPEVEAYLQLLLVIYLMNSKRYPEAQKVSDDLMQKISSQNRR 185
Query: 121 TVDVLAARLYFYYSLCYELTGDLAEIRGNLLALHRIATLRHDELGQETXXXXXXXXXXXX 180
+D++ A+ Y+Y+S YE L +R L A R ATLRHD GQ T
Sbjct: 186 ALDLVVAKCYYYHSRIYEFLNKLDVVRSFLHARLRTATLRHDADGQATLLNLLLRNYLHY 245
Query: 181 XXXDQAEKLRSKAPRFEAHSNQQFCRYLFYLGKIRTIQLEYTDAKESLLQAARKAPV-AA 239
DQAEKL SK+ E +N ++ RYL+Y G+I+ IQLEY++A+ ++ A RKAP A
Sbjct: 246 NLYDQAEKLVSKSVFPEQANNNEWARYLYYTGRIKAIQLEYSEARRTMTNALRKAPQHTA 305
Query: 240 LGFRVQCNKWAIIVRLLLGEIPERTVFMQKGMEKALRPYFELT 282
+GF+ +K I+V LLLGEIP+R F Q ++++L PYF LT
Sbjct: 306 VGFKQTVHKLLIVVELLLGEIPDRLQFRQPSLKRSLMPYFLLT 348
Score = 231 (86.4 bits), Expect = 2.3e-66, Sum P(2) = 2.3e-66
Identities = 46/95 (48%), Positives = 63/95 (66%)
Query: 360 SKAIRDGAIDATVDHANGWMVSKETGDIYSTNEPQLAFNSRIAFCLNMHNEAVRALRFPP 419
S+AIRDG I+A+++H G++ SKE DIYST EPQLAF+ RI+FCL++HN +V+A+RFPP
Sbjct: 417 SQAIRDGVIEASINHEKGYVQSKEMIDIYSTREPQLAFHQRISFCLDIHNMSVKAMRFPP 476
Query: 420 NSHXXXXXXXXXXXXXXXXXX-LAKHIAEEDDDEF 453
S+ AK +AE+DDD F
Sbjct: 477 KSYNKDLESAEERREREQQDLEFAKEMAEDDDDGF 511
>UNIPROTKB|H9L164 [details] [associations]
symbol:H9L164 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000502 "proteasome complex" evidence=IEA]
[GO:0030234 "enzyme regulator activity" evidence=IEA] [GO:0042176
"regulation of protein catabolic process" evidence=IEA]
InterPro:IPR013586 Pfam:PF08375 GO:GO:0030234 GO:GO:0050790
GO:GO:0000502 GO:GO:0042176 InterPro:IPR013143 SMART:SM00753
GeneTree:ENSGT00490000043406 EMBL:AADN02050853 EMBL:AADN02050851
EMBL:AADN02050852 Ensembl:ENSGALT00000029758 Uniprot:H9L164
Length = 457
Score = 626 (225.4 bits), Expect = 3.4e-61, P = 3.4e-61
Identities = 162/455 (35%), Positives = 242/455 (53%)
Query: 1 METGAHAREVRRIMRAVRLTMALRRKLKAPVLSAFLNFALAPGSEAHSRLLSYLPKEDEH 60
+E +E R ++RA+R + R+L A VL +N LL +L + +
Sbjct: 18 LEKAVAGKEPRYVLRALRALPSTSRRLNANVLHKAVNGFFTSNGAVRDFLLGFLEEPMDT 77
Query: 61 EMEVDTASSGAPAPAKHPLPELEIYCYLLVLIFLIDKKRYNEAKACSSASIARLKNMNRR 120
E E+ A + LPE+E Y LL++I+L++ KRY EA+ S + ++ + NRR
Sbjct: 78 EAELQFRPRMGKAASAPLLPEVEAYLQLLLVIYLMNSKRYPEAQKVSDDLMQKISSQNRR 137
Query: 121 TVDVLAARLYFYYSLCYELTGDLAEIRGNLLALHRIATLRHDELGQETXXXXXXXXXXXX 180
+D++ A+ Y+Y+S YE L +R L A R ATLRHD GQ T
Sbjct: 138 ALDLVVAKCYYYHSRIYEFLNKLDVVRSFLHARLRTATLRHDADGQATLLNLLLRNYLHY 197
Query: 181 XXXDQAEKLRSKAPRFEAHSNQQFCRYLFYLGKIRTIQLEYTDAKESLLQAARKAPV-AA 239
DQAEKL SK+ E +N ++ RYL+Y G+I+ IQLEY++A+ ++ A RKAP A
Sbjct: 198 NLYDQAEKLVSKSVFPEQANNNEWARYLYYTGRIKAIQLEYSEARRTMTNALRKAPQHTA 257
Query: 240 LGFRVQCNKWAIIVRLLLGEIPERTVFMQKGMEKALRPYFELTNAVRIGDLELFKSVAEK 299
+GF+ +K I+V LLLGEIP+R F Q ++++L PYF LT G + L + +
Sbjct: 258 VGFKQTVHKLLIVVELLLGEIPDRLQFRQPSLKRSLMPYFLLTQ----GTVLLRVLLPQS 313
Query: 300 FSSTFSSDRTNNLIVRLRHNVIRTGLRNISISYSRISLADVAKKLRLDSANPVADAESIV 359
+ + R I H+ + L + S++ + D A P
Sbjct: 314 LGTECPTSRAPTPISV--HS-LSPPLP--APSFALNCCLHPGRWWCPDHA-PRG------ 361
Query: 360 SKAIRDGAIDATVDHANGWMVSKETGDIYSTNEPQLAFNSRIAFCLNMHNEAVRALRFPP 419
S+AIRDG I+A+++H G++ SKE DIYST EPQLAF+ RI+FCL++HN +V+A+RFPP
Sbjct: 362 SQAIRDGVIEASINHEKGYVQSKEMIDIYSTREPQLAFHQRISFCLDIHNMSVKAMRFPP 421
Query: 420 NSHXXXXXXXXXXXXXXXXXX-LAKHIAEEDDDEF 453
S+ AK +AE+DDD F
Sbjct: 422 KSYNKDLESAEERREREQQDLEFAKEMAEDDDDGF 456
>SGD|S000000823 [details] [associations]
symbol:RPN3 "non-ATPase regulatory subunit of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0003674 "molecular_function" evidence=ND] [GO:0050790
"regulation of catalytic activity" evidence=IEA] [GO:0000502
"proteasome complex" evidence=IEA] [GO:0030234 "enzyme regulator
activity" evidence=IEA] [GO:0042176 "regulation of protein
catabolic process" evidence=IEA] [GO:0008541 "proteasome regulatory
particle, lid subcomplex" evidence=IDA] InterPro:IPR000717
InterPro:IPR013586 Pfam:PF01399 Pfam:PF08375 SMART:SM00088
SGD:S000000823 GO:GO:0030234 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0050790 EMBL:BK006939 GO:GO:0008541 GO:GO:0006511 EMBL:U18778
GO:GO:0042176 InterPro:IPR013143 SMART:SM00753 PDB:4B4T PDBsum:4B4T
eggNOG:NOG251646 HOGENOM:HOG000193909 KO:K03033 OMA:LKHDNET
GeneTree:ENSGT00490000043406 OrthoDB:EOG4350FR EMBL:D78023
PIR:S50479 RefSeq:NP_010938.1 ProteinModelPortal:P40016
DIP:DIP-1322N IntAct:P40016 MINT:MINT-401279 STRING:P40016
PaxDb:P40016 PeptideAtlas:P40016 EnsemblFungi:YER021W GeneID:856742
KEGG:sce:YER021W NextBio:982876 Genevestigator:P40016
GermOnline:YER021W Uniprot:P40016
Length = 523
Score = 533 (192.7 bits), Expect = 2.4e-51, P = 2.4e-51
Identities = 128/354 (36%), Positives = 196/354 (55%)
Query: 81 ELEIYCYLLVLIFLIDKKRYNEAKACSSASIAR--LKNMNRRTVDVLAARLYFYYSLCYE 138
E+ + +LLV +FL D K + + + L N R+++++ A+L+FY L +E
Sbjct: 133 EINCFMHLLVQLFLWDSKELEQLVEFNRKVVIPNLLCYYNLRSLNLINAKLWFYIYLSHE 192
Query: 139 LTGDLAE----------IRGNLLALHRIATLRHDELGQETXXXXXXXXXXXXXXXDQAEK 188
+E +R ++ +IA+L+HD + D A
Sbjct: 193 TLARSSEEINSDNQNIILRSTMMKFLKIASLKHDNETKAMLINLILRDFLNNGEVDSASD 252
Query: 189 LRSKA--PRFEAHSNQQFCRYLFYLGKIRTIQLEYTDAKESLLQAARKAP--VAALGFRV 244
SK P + S+ + RY FYL KI IQL+Y+ A E ++ A RKAP +LGF
Sbjct: 253 FISKLEYPHTDVSSSLE-ARYFFYLSKINAIQLDYSTANEYIIAAIRKAPHNSKSLGFLQ 311
Query: 245 QCNKWAIIVRLLLGEIPERTVFMQKGMEKALRPYFELTNAVRIGDLELFKSVAEKFSSTF 304
Q NK ++LL+G+IPE + F Q M+K+L PY+ LT AV++GDL+ F S K+
Sbjct: 312 QSNKLHCCIQLLMGDIPELSFFHQSNMQKSLLPYYHLTKAVKLGDLKKFTSTITKYKQLL 371
Query: 305 SSDRTNNLIVRLRHNVIRTGLRNISISYSRISLADVAKKLRLDSANPVADAESIVSKAIR 364
D T L VRLR NVI+TG+R IS++Y +ISL D+ KL LDS V E +VS+AIR
Sbjct: 372 LKDDTYQLCVRLRSNVIKTGIRIISLTYKKISLRDICLKLNLDSEQTV---EYMVSRAIR 428
Query: 365 DGAIDATVDHANGWMVSKETGDIYSTNEPQLAFNSRIAFCLNMHNEAVRALRFP 418
DG I+A ++H +G++ + E +IY + +PQ F+ RI F +H+E + ++R+P
Sbjct: 429 DGVIEAKINHEDGFIETTELLNIYDSEDPQQVFDERIKFANQLHDEYLVSMRYP 482
>FB|FBgn0027055 [details] [associations]
symbol:CSN3 "COP9 complex homolog subunit 3" species:7227
"Drosophila melanogaster" [GO:0008180 "signalosome"
evidence=ISS;NAS] [GO:0050821 "protein stabilization" evidence=IMP]
[GO:0007095 "mitotic G2 DNA damage checkpoint" evidence=IGI]
[GO:0046331 "lateral inhibition" evidence=IMP] InterPro:IPR000717
Pfam:PF01399 SMART:SM00088 GO:GO:0007275 GO:GO:0005737
GO:GO:0007095 GO:GO:0050821 EMBL:AE014296 GO:GO:0048477
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0046331 GO:GO:0008180
CTD:1448 GO:GO:0000338 GO:GO:0019781 eggNOG:NOG249849 KO:K12177
OMA:DRALYFF GeneTree:ENSGT00490000043408 EMBL:AF129081
EMBL:AY071575 RefSeq:NP_524190.2 UniGene:Dm.5855
ProteinModelPortal:Q8SYG2 IntAct:Q8SYG2 MINT:MINT-278777
STRING:Q8SYG2 PaxDb:Q8SYG2 EnsemblMetazoa:FBtr0078269 GeneID:40308
KEGG:dme:Dmel_CG18332 FlyBase:FBgn0027055 InParanoid:Q8SYG2
OrthoDB:EOG4JQ2CW PhylomeDB:Q8SYG2 GenomeRNAi:40308 NextBio:818125
Bgee:Q8SYG2 GermOnline:CG18332 Uniprot:Q8SYG2
Length = 445
Score = 151 (58.2 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 47/200 (23%), Positives = 95/200 (47%)
Query: 204 FCRYLFYLGKIRTIQLEYTDAKESLLQAARKAPVAALG-FRVQCNKWAIIVRLLL-GEI- 260
F Y +Y G I T Y A + P A+ ++ K ++V L++ G+I
Sbjct: 198 FLLYFYYGGMIYTAVKNYERALY-FFEVCITTPAMAMSHIMLEAYKKFLMVSLIVEGKIA 256
Query: 261 --PERTVFMQKGMEKALRPYFELTNAVRIGDLELFKSVAEKFSSTFSSDRTNNLIVRLRH 318
P+ T + + M+ Y +L N E + + K+S F+ D L ++
Sbjct: 257 YIPKNTQVIGRFMKPMANHYHDLVNVYANSSSEELRIIILKYSEAFTRDNNMGLAKQVAT 316
Query: 319 NVIRTGLRNISISYSRISLADVAKKLRLDSANPVADAESIVSKAIRDGAIDATVDHANGW 378
++ + ++ ++ ++ +SL+DVA +++L SA +AE + I+ G I A+++ +G
Sbjct: 317 SLYKRNIQRLTKTFLTLSLSDVASRVQLASA---VEAERYILNMIKSGEIYASINQKDGM 373
Query: 379 MVSKETGDIYSTNEPQLAFN 398
++ K+ + Y N P++ N
Sbjct: 374 VLFKDDPEKY--NSPEMFLN 391
>DICTYBASE|DDB_G0291848 [details] [associations]
symbol:csn3 "proteasome component region PCI (PINT)
domain-containing protein" species:44689 "Dictyostelium discoideum"
[GO:0008180 "signalosome" evidence=IEA;ISS;IPI] [GO:0005515
"protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000717 Pfam:PF01399 SMART:SM00088
dictyBase:DDB_G0291848 GO:GO:0005737 GenomeReviews:CM000155_GR
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0008180 eggNOG:NOG249849
KO:K12177 OMA:DRALYFF EMBL:DQ309431 EMBL:AAFI02000185
RefSeq:XP_629934.1 ProteinModelPortal:Q54E53 STRING:Q54E53
EnsemblProtists:DDB0233101 GeneID:8628339 KEGG:ddi:DDB_G0291848
ProtClustDB:CLSZ2497092 Uniprot:Q54E53
Length = 418
Score = 143 (55.4 bits), Expect = 7.9e-07, P = 7.9e-07
Identities = 49/189 (25%), Positives = 89/189 (47%)
Query: 207 YLFYLGKIRTIQLEYTDAKESLLQAARKAPVAALG-FRVQCNKWAIIVRLL-LGEI---P 261
Y +Y G I T +Y A E+ + AP +AL V+ K +IV L+ G + P
Sbjct: 176 YFYYSGIIFTAFKKYKKAIEAF-KFVITAPASALSAITVEAYKKYLIVYLIQFGSVQHFP 234
Query: 262 ERT-VFMQKGMEKALRPYFELTNAVRIGDLELFKSVAEKFSSTFSSDRTNNLIVRLRHNV 320
+ T +Q+ ++ +PY E + G++ + A + F D L+ +
Sbjct: 235 KCTPAVVQRNIKSHCKPYTEFVQSFSNGNINDIMNKASSGAEFFQKDSNWGLVKLSIKST 294
Query: 321 IRTGLRNISISYSRISLADVAKKLRLDSANPVADAESIVSKAIRDGAIDATVDHANGWMV 380
R ++ ++ ++ +S+ D+A+K+ L P A AE V K I +G I AT++ +G +
Sbjct: 295 YRRNIKKLTQTFMTLSINDIAEKVSL----PKAKAEQFVLKMIEEGEIFATINQKDGMVT 350
Query: 381 SKETGDIYS 389
E + +S
Sbjct: 351 FDECFEDFS 359
>UNIPROTKB|E2RD70 [details] [associations]
symbol:COPS3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0010388 "cullin deneddylation" evidence=IEA]
[GO:0008180 "signalosome" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0001701 "in utero embryonic development"
evidence=IEA] InterPro:IPR000717 Pfam:PF01399 SMART:SM00088
GO:GO:0005737 GO:GO:0001701 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0008180 GO:GO:0010388 KO:K12177 OMA:DRALYFF CTD:8533
GeneTree:ENSGT00490000043408 EMBL:AAEX03003732 RefSeq:XP_864801.2
ProteinModelPortal:E2RD70 Ensembl:ENSCAFT00000029331 GeneID:479528
KEGG:cfa:479528 NextBio:20854700 Uniprot:E2RD70
Length = 423
Score = 143 (55.4 bits), Expect = 8.0e-07, P = 8.0e-07
Identities = 50/225 (22%), Positives = 105/225 (46%)
Query: 198 AHSNQQFCRYLFYLGKIRTIQLEYTDAKESLLQAARKAPVAALGFRVQCNKWAIIVRL-L 256
A+ + F Y +Y G I T + A QA +A ++ K I+V L L
Sbjct: 175 AYDAKHFLCYYYYGGMIYTGLKNFERALYFYEQAITTPAMAVSHIMLESYKKYILVSLIL 234
Query: 257 LGEIPERTVFMQKGMEKALRP----YFELTNAVRIGDLELFKSVAEKFSSTFSSDRTNNL 312
LG++ + + + + + ++P Y EL + +++ K S TF+ D L
Sbjct: 235 LGKVQQLPKYTSQIVGRFIKPLSNAYHELAQVYSTNNPSELRNLVNKHSETFTRDNNMGL 294
Query: 313 IVRLRHNVIRTGLRNISISYSRISLADVAKKLRLDSANPVADAESIVSKAIRDGAIDATV 372
+ + ++ + ++ ++ ++ +SL D+A +++L + P +AE V I DG I A++
Sbjct: 295 VKQCLSSLYKKNIQRLTKTFLTLSLQDMASRVQL--SGP-QEAEKYVLHMIEDGEIFASI 351
Query: 373 DHANGWMVSKETGDIYSTNEPQLAFN--SRIAFCLNMHNEAVRAL 415
+ +G + + + Y N P + N + C+ + +E ++A+
Sbjct: 352 NQKDGMVSFHDNPEKY--NNPAMLHNIDQEMLKCIEL-DERLKAM 393
>UNIPROTKB|Q9UNS2 [details] [associations]
symbol:COPS3 "COP9 signalosome complex subunit 3"
species:9606 "Homo sapiens" [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0008180 "signalosome" evidence=IDA] [GO:0010388
"cullin deneddylation" evidence=IDA] [GO:0009416 "response to light
stimulus" evidence=TAS] [GO:0007165 "signal transduction"
evidence=TAS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR000717 Pfam:PF01399
SMART:SM00088 GO:GO:0005737 GO:GO:0007165 GO:GO:0001701
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0009416 EMBL:CH471196
GO:GO:0008180 CleanEx:HS_CSN3 GO:GO:0010388 eggNOG:NOG249849
HOGENOM:HOG000030451 KO:K12177 OMA:DRALYFF CTD:8533
HOVERGEN:HBG051135 OrthoDB:EOG49KFQJ EMBL:AF031647 EMBL:AF098109
EMBL:AK312476 EMBL:AK302304 EMBL:AK316400 EMBL:AC055811
EMBL:BC001891 IPI:IPI00025721 RefSeq:NP_001186054.1
RefSeq:NP_003644.2 UniGene:Hs.6076 ProteinModelPortal:Q9UNS2
DIP:DIP-32478N IntAct:Q9UNS2 MINT:MINT-129190 STRING:Q9UNS2
PhosphoSite:Q9UNS2 DMDM:55976621 PaxDb:Q9UNS2 PeptideAtlas:Q9UNS2
PRIDE:Q9UNS2 DNASU:8533 Ensembl:ENST00000268717
Ensembl:ENST00000539941 GeneID:8533 KEGG:hsa:8533 UCSC:uc002grd.3
GeneCards:GC17M017151 HGNC:HGNC:2239 HPA:HPA021997 MIM:604665
neXtProt:NX_Q9UNS2 PharmGKB:PA26755 InParanoid:Q9UNS2
PhylomeDB:Q9UNS2 ChiTaRS:COPS3 GenomeRNAi:8533 NextBio:31960
ArrayExpress:Q9UNS2 Bgee:Q9UNS2 CleanEx:HS_COPS3
Genevestigator:Q9UNS2 GermOnline:ENSG00000141030 Uniprot:Q9UNS2
Length = 423
Score = 143 (55.4 bits), Expect = 8.0e-07, P = 8.0e-07
Identities = 50/225 (22%), Positives = 105/225 (46%)
Query: 198 AHSNQQFCRYLFYLGKIRTIQLEYTDAKESLLQAARKAPVAALGFRVQCNKWAIIVRL-L 256
A+ + F Y +Y G I T + A QA +A ++ K I+V L L
Sbjct: 175 AYDAKHFLCYYYYGGMIYTGLKNFERALYFYEQAITTPAMAVSHIMLESYKKYILVSLIL 234
Query: 257 LGEIPERTVFMQKGMEKALRP----YFELTNAVRIGDLELFKSVAEKFSSTFSSDRTNNL 312
LG++ + + + + + ++P Y EL + +++ K S TF+ D L
Sbjct: 235 LGKVQQLPKYTSQIVGRFIKPLSNAYHELAQVYSTNNPSELRNLVNKHSETFTRDNNMGL 294
Query: 313 IVRLRHNVIRTGLRNISISYSRISLADVAKKLRLDSANPVADAESIVSKAIRDGAIDATV 372
+ + ++ + ++ ++ ++ +SL D+A +++L + P +AE V I DG I A++
Sbjct: 295 VKQCLSSLYKKNIQRLTKTFLTLSLQDMASRVQL--SGP-QEAEKYVLHMIEDGEIFASI 351
Query: 373 DHANGWMVSKETGDIYSTNEPQLAFN--SRIAFCLNMHNEAVRAL 415
+ +G + + + Y N P + N + C+ + +E ++A+
Sbjct: 352 NQKDGMVSFHDNPEKY--NNPAMLHNIDQEMLKCIEL-DERLKAM 393
>MGI|MGI:1349409 [details] [associations]
symbol:Cops3 "COP9 (constitutive photomorphogenic) homolog,
subunit 3 (Arabidopsis thaliana)" species:10090 "Mus musculus"
[GO:0001701 "in utero embryonic development" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0008180
"signalosome" evidence=ISO;IDA] [GO:0010388 "cullin deneddylation"
evidence=ISO] InterPro:IPR000717 Pfam:PF01399 SMART:SM00088
MGI:MGI:1349409 GO:GO:0005737 GO:GO:0001701 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0008180 CleanEx:MM_CSN3 GO:GO:0010388
eggNOG:NOG249849 HOGENOM:HOG000030451 KO:K12177 OMA:DRALYFF
CTD:8533 HOVERGEN:HBG051135 OrthoDB:EOG49KFQJ EMBL:AF071313
EMBL:BC068179 IPI:IPI00131870 RefSeq:NP_036121.1 UniGene:Mm.40
ProteinModelPortal:O88543 IntAct:O88543 STRING:O88543
PhosphoSite:O88543 PaxDb:O88543 PRIDE:O88543
Ensembl:ENSMUST00000019517 GeneID:26572 KEGG:mmu:26572
InParanoid:O88543 NextBio:304659 Bgee:O88543 Genevestigator:O88543
GermOnline:ENSMUSG00000019373 Uniprot:O88543
Length = 423
Score = 143 (55.4 bits), Expect = 8.0e-07, P = 8.0e-07
Identities = 50/225 (22%), Positives = 105/225 (46%)
Query: 198 AHSNQQFCRYLFYLGKIRTIQLEYTDAKESLLQAARKAPVAALGFRVQCNKWAIIVRL-L 256
A+ + F Y +Y G I T + A QA +A ++ K I+V L L
Sbjct: 175 AYDAKHFLCYYYYGGMIYTGLKNFERALYFYEQAITTPAMAVSHIMLESYKKYILVSLIL 234
Query: 257 LGEIPERTVFMQKGMEKALRP----YFELTNAVRIGDLELFKSVAEKFSSTFSSDRTNNL 312
LG++ + + + + + ++P Y EL + +++ K S TF+ D L
Sbjct: 235 LGKVQQLPKYTSQIVGRFIKPLSNAYHELAQVYSTNNPSELRNLVSKHSETFTRDNNMGL 294
Query: 313 IVRLRHNVIRTGLRNISISYSRISLADVAKKLRLDSANPVADAESIVSKAIRDGAIDATV 372
+ + ++ + ++ ++ ++ +SL D+A +++L + P +AE V I DG I A++
Sbjct: 295 VKQCLSSLYKKNIQRLTKTFLTLSLQDMASRVQL--SGP-QEAEKYVLHMIEDGEIFASI 351
Query: 373 DHANGWMVSKETGDIYSTNEPQLAFN--SRIAFCLNMHNEAVRAL 415
+ +G + + + Y N P + N + C+ + +E ++A+
Sbjct: 352 NQKDGMVSFHDNPEKY--NNPAMLHNIDQEMLKCIEL-DERLKAM 393
>RGD|1303002 [details] [associations]
symbol:Cops3 "COP9 signalosome subunit 3" species:10116 "Rattus
norvegicus" [GO:0001701 "in utero embryonic development"
evidence=IEA;ISO] [GO:0005634 "nucleus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0008180 "signalosome"
evidence=IEA;ISO] [GO:0010388 "cullin deneddylation"
evidence=IEA;ISO] InterPro:IPR000717 Pfam:PF01399 SMART:SM00088
RGD:1303002 GO:GO:0005737 GO:GO:0001701 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0008180 GO:GO:0010388 eggNOG:NOG249849
HOGENOM:HOG000030451 KO:K12177 OMA:DRALYFF CTD:8533
GeneTree:ENSGT00490000043408 HOVERGEN:HBG051135 OrthoDB:EOG49KFQJ
EMBL:BC079143 IPI:IPI00200828 RefSeq:NP_001004200.1 UniGene:Rn.3963
ProteinModelPortal:Q68FW9 STRING:Q68FW9 PhosphoSite:Q68FW9
PRIDE:Q68FW9 Ensembl:ENSRNOT00000004438 GeneID:287367
KEGG:rno:287367 UCSC:RGD:1303002 InParanoid:Q68FW9 NextBio:625967
Genevestigator:Q68FW9 Uniprot:Q68FW9
Length = 423
Score = 143 (55.4 bits), Expect = 8.0e-07, P = 8.0e-07
Identities = 50/225 (22%), Positives = 105/225 (46%)
Query: 198 AHSNQQFCRYLFYLGKIRTIQLEYTDAKESLLQAARKAPVAALGFRVQCNKWAIIVRL-L 256
A+ + F Y +Y G I T + A QA +A ++ K I+V L L
Sbjct: 175 AYDAKHFLCYYYYGGMIYTGLKNFERALYFYEQAITTPAMAVSHIMLESYKKYILVSLIL 234
Query: 257 LGEIPERTVFMQKGMEKALRP----YFELTNAVRIGDLELFKSVAEKFSSTFSSDRTNNL 312
LG++ + + + + + ++P Y EL + +++ K S TF+ D L
Sbjct: 235 LGKVQQLPKYTSQIVGRFIKPLSNAYHELAQVYSTNNPSELRNLVNKHSETFTRDNNMGL 294
Query: 313 IVRLRHNVIRTGLRNISISYSRISLADVAKKLRLDSANPVADAESIVSKAIRDGAIDATV 372
+ + ++ + ++ ++ ++ +SL D+A +++L + P +AE V I DG I A++
Sbjct: 295 VKQCLSSLYKKNIQRLTKTFLTLSLQDMASRVQL--SGP-QEAEKYVLHMIEDGEIFASI 351
Query: 373 DHANGWMVSKETGDIYSTNEPQLAFN--SRIAFCLNMHNEAVRAL 415
+ +G + + + Y N P + N + C+ + +E ++A+
Sbjct: 352 NQKDGMVSFHDNPEKY--NNPAMLHNIDQEMLKCIEL-DERLKAM 393
>UNIPROTKB|Q5ZJF1 [details] [associations]
symbol:COPS3 "COP9 signalosome complex subunit 3"
species:9031 "Gallus gallus" [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0001701 "in utero embryonic development" evidence=IEA]
[GO:0008180 "signalosome" evidence=IEA] [GO:0010388 "cullin
deneddylation" evidence=IEA] InterPro:IPR000717 Pfam:PF01399
SMART:SM00088 GO:GO:0005737 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0008180 GO:GO:0010388 eggNOG:NOG249849 HOGENOM:HOG000030451
KO:K12177 OMA:DRALYFF CTD:8533 GeneTree:ENSGT00490000043408
HOVERGEN:HBG051135 OrthoDB:EOG49KFQJ EMBL:AJ720483 IPI:IPI00599251
RefSeq:NP_001006163.1 UniGene:Gga.31710 ProteinModelPortal:Q5ZJF1
STRING:Q5ZJF1 PRIDE:Q5ZJF1 Ensembl:ENSGALT00000007721 GeneID:416504
KEGG:gga:416504 InParanoid:Q5ZJF1 NextBio:20819948 Uniprot:Q5ZJF1
Length = 423
Score = 142 (55.0 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 50/225 (22%), Positives = 104/225 (46%)
Query: 198 AHSNQQFCRYLFYLGKIRTIQLEYTDAKESLLQAARKAPVAALGFRVQCNKWAIIVRL-L 256
A+ + F Y +Y G I T + A QA +A ++ K I+V L L
Sbjct: 175 AYDAKHFLCYYYYGGMIYTGLKNFERALYFYEQAITTPAMAVSHIMLESYKKYILVSLIL 234
Query: 257 LGEIPERTVFMQKGMEKALRP----YFELTNAVRIGDLELFKSVAEKFSSTFSSDRTNNL 312
LG++ + + + + + ++P Y EL +++ K S TF+ D L
Sbjct: 235 LGKVQQLPKYTSQIVGRFIKPLSNAYHELAQVYSTNKPSELRNLVNKHSETFTRDNNMGL 294
Query: 313 IVRLRHNVIRTGLRNISISYSRISLADVAKKLRLDSANPVADAESIVSKAIRDGAIDATV 372
+ + ++ + ++ ++ ++ +SL D+A +++L + P +AE V I DG I A++
Sbjct: 295 VKQCLSSLYKKNIQRLTKTFLTLSLQDMASRVQL--SGP-QEAEKYVLHMIEDGEIFASI 351
Query: 373 DHANGWMVSKETGDIYSTNEPQLAFN--SRIAFCLNMHNEAVRAL 415
+ +G + + + Y N P + N + C+ + +E ++A+
Sbjct: 352 NQKDGMVCFHDNPEKY--NNPAMLHNIDQEMLKCIEL-DERLKAM 393
>UNIPROTKB|A6H7B5 [details] [associations]
symbol:COPS3 "COP9 signalosome complex subunit 3"
species:9913 "Bos taurus" [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0010388 "cullin deneddylation" evidence=IEA] [GO:0008180
"signalosome" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] InterPro:IPR000717 Pfam:PF01399
SMART:SM00088 GO:GO:0005737 GO:GO:0001701 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0008180 GO:GO:0010388 eggNOG:NOG249849
HOGENOM:HOG000030451 KO:K12177 OMA:DRALYFF EMBL:BC146183
IPI:IPI00695994 RefSeq:NP_001092374.1 UniGene:Bt.3232
ProteinModelPortal:A6H7B5 STRING:A6H7B5 PRIDE:A6H7B5
Ensembl:ENSBTAT00000025255 GeneID:507932 KEGG:bta:507932 CTD:8533
GeneTree:ENSGT00490000043408 HOVERGEN:HBG051135 InParanoid:A6H7B5
OrthoDB:EOG49KFQJ NextBio:20868278 Uniprot:A6H7B5
Length = 423
Score = 138 (53.6 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 49/225 (21%), Positives = 104/225 (46%)
Query: 198 AHSNQQFCRYLFYLGKIRTIQLEYTDAKESLLQAARKAPVAALGFRVQCNKWAIIVRL-L 256
A+ + F Y +Y G + T + A QA +A ++ K I+V L L
Sbjct: 175 AYDAKHFLCYYYYGGMVYTGLKNFERALYFYEQAITTPAMAVSHIMLESYKKYILVSLIL 234
Query: 257 LGEIPERTVFMQKGMEKALRP----YFELTNAVRIGDLELFKSVAEKFSSTFSSDRTNNL 312
LG++ + + + + + ++P Y EL + +S+ K S F+ D L
Sbjct: 235 LGKVQQLPKYTSQIVGRFIKPLSNAYHELAQVYSTNNPSELRSLVTKHSEIFTRDNNMGL 294
Query: 313 IVRLRHNVIRTGLRNISISYSRISLADVAKKLRLDSANPVADAESIVSKAIRDGAIDATV 372
+ + ++ + ++ ++ ++ +SL D+A +++L + P +AE V I DG I A++
Sbjct: 295 VKQCLSSLYKKNIQRLTKTFLTLSLQDMASRVQL--SGP-QEAEKYVLHMIEDGEIFASI 351
Query: 373 DHANGWMVSKETGDIYSTNEPQLAFN--SRIAFCLNMHNEAVRAL 415
+ +G + + + Y N P + N + C+ + +E ++A+
Sbjct: 352 NQKDGMVSFHDNPEKY--NNPAMLHNIDQEMLKCIEL-DERLKAM 393
>ZFIN|ZDB-GENE-030131-7660 [details] [associations]
symbol:cops3 "COP9 constitutive photomorphogenic
homolog subunit 3" species:7955 "Danio rerio" [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0008180
"signalosome" evidence=IEA] InterPro:IPR000717 Pfam:PF01399
SMART:SM00088 ZFIN:ZDB-GENE-030131-7660 GO:GO:0005737
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0008180
HOGENOM:HOG000030451 KO:K12177 CTD:8533 HOVERGEN:HBG051135
EMBL:BC045415 EMBL:BC064288 IPI:IPI00484908 RefSeq:NP_955979.1
UniGene:Dr.120979 ProteinModelPortal:Q6P2U9 PRIDE:Q6P2U9
GeneID:335720 KEGG:dre:335720 InParanoid:Q6P2U9 NextBio:20810996
Bgee:Q6P2U9 Uniprot:Q6P2U9
Length = 423
Score = 137 (53.3 bits), Expect = 3.7e-06, P = 3.7e-06
Identities = 47/225 (20%), Positives = 105/225 (46%)
Query: 198 AHSNQQFCRYLFYLGKIRTIQLEYTDAKESLLQAARKAPVAALGFRVQCNKWAIIVRLLL 257
A+ + F Y +Y G I T + A QA +A ++ K I+V L+L
Sbjct: 175 AYDAKHFLCYYYYGGMIYTGLKNFERALYFFEQAITTPAMAVSHIMLEAYKKYILVSLIL 234
Query: 258 -GEIPERTVFMQKGMEKALRP----YFELTNAVRIGDLELFKSVAEKFSSTFSSDRTNNL 312
G++ + + + + + ++P Y EL + +++ K S TF+ D L
Sbjct: 235 HGKVQQLPKYTSQIVGRFIKPLSNAYHELAQIYATNNPAELRALVNKHSETFTRDNNTGL 294
Query: 313 IVRLRHNVIRTGLRNISISYSRISLADVAKKLRLDSANPVADAESIVSKAIRDGAIDATV 372
+ + ++ + ++ ++ ++ +SL D+A +++L + P +AE V I DG I A++
Sbjct: 295 VKQCLSSLYKKNIQRLTKTFLTLSLQDMASRVQL--SGP-QEAEKYVLHMIEDGEIYASI 351
Query: 373 DHANGWMVSKETGDIYSTNEPQLA--FNSRIAFCLNMHNEAVRAL 415
+ +G + + + Y N P + + + C+ + +E ++++
Sbjct: 352 NQKDGMVCFHDNPEKY--NNPAMLHKIDQEMLKCIEL-DEKLKSM 393
>UNIPROTKB|F1SB16 [details] [associations]
symbol:COPS3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0010388 "cullin deneddylation" evidence=IEA]
[GO:0008180 "signalosome" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0001701 "in utero embryonic development"
evidence=IEA] InterPro:IPR000717 Pfam:PF01399 SMART:SM00088
GO:GO:0005737 GO:GO:0001701 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0008180 GO:GO:0010388 KO:K12177 OMA:DRALYFF CTD:8533
GeneTree:ENSGT00490000043408 EMBL:CU927962 RefSeq:NP_001231078.1
UniGene:Ssc.11099 Ensembl:ENSSSCT00000019646 GeneID:100512312
KEGG:ssc:100512312 Uniprot:F1SB16
Length = 423
Score = 135 (52.6 bits), Expect = 6.2e-06, P = 6.2e-06
Identities = 46/223 (20%), Positives = 102/223 (45%)
Query: 198 AHSNQQFCRYLFYLGKIRTIQLEYTDAKESLLQAARKAPVAALGFRVQCNKWAIIVRL-L 256
A+ + F Y +Y G + T + A QA +A ++ K I+V L L
Sbjct: 175 AYDARHFLCYYYYGGMVYTGLKNFERALYFYEQAITTPAMAVSHIMLESYKKYILVSLIL 234
Query: 257 LGEIPERTVFMQKGMEKALRP----YFELTNAVRIGDLELFKSVAEKFSSTFSSDRTNNL 312
LG++ + + + + + ++P Y EL +++ K S TF D L
Sbjct: 235 LGKVQQLPKYTSQIVGRFIKPLSNAYHELAQVYSTNSPSELRTLVNKHSETFVRDSNMGL 294
Query: 313 IVRLRHNVIRTGLRNISISYSRISLADVAKKLRLDSANPVADAESIVSKAIRDGAIDATV 372
+ + ++ + ++ ++ ++ +SL D+A +++L + P +AE V I DG I A++
Sbjct: 295 VKQCLSSLYKKNIQRLTKTFLTLSLQDMASRVQL--SGP-QEAEKYVLHMIEDGEIFASI 351
Query: 373 DHANGWMVSKETGDIYSTNEPQLAFNSRIAFCLNMHNEAVRAL 415
+ +G + + + Y+ + + + C+ + +E ++A+
Sbjct: 352 NQKDGMVSFHDNPEKYNNPAMLQSIDQEMLKCIEL-DERLKAM 393
>TAIR|locus:2145638 [details] [associations]
symbol:COP13 "AT5G14250" species:3702 "Arabidopsis
thaliana" [GO:0008180 "signalosome" evidence=TAS;IPI] [GO:0009640
"photomorphogenesis" evidence=RCA;TAS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0010388 "cullin deneddylation"
evidence=RCA;IMP] [GO:0010971 "positive regulation of G2/M
transition of mitotic cell cycle" evidence=IMP] [GO:0005829
"cytosol" evidence=IDA] [GO:0000278 "mitotic cell cycle"
evidence=RCA] [GO:0006312 "mitotic recombination" evidence=RCA]
[GO:0006396 "RNA processing" evidence=RCA] [GO:0009560 "embryo sac
egg cell differentiation" evidence=RCA] [GO:0009793 "embryo
development ending in seed dormancy" evidence=RCA] [GO:0009845
"seed germination" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009933 "meristem structural
organization" evidence=RCA] [GO:0010162 "seed dormancy process"
evidence=RCA] [GO:0010182 "sugar mediated signaling pathway"
evidence=RCA] [GO:0010228 "vegetative to reproductive phase
transition of meristem" evidence=RCA] [GO:0016567 "protein
ubiquitination" evidence=RCA] [GO:0016571 "histone methylation"
evidence=RCA] [GO:0016579 "protein deubiquitination" evidence=RCA]
[GO:0019915 "lipid storage" evidence=RCA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=RCA]
[GO:0050826 "response to freezing" evidence=RCA] [GO:0051604
"protein maturation" evidence=RCA] InterPro:IPR000717 Pfam:PF01399
SMART:SM00088 GO:GO:0007275 GO:GO:0005829 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0000085 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0009585 EMBL:AL163817 GO:GO:0008180
GO:GO:0010388 EMBL:AF361759 EMBL:AF361760 EMBL:AF395059
EMBL:AF419585 EMBL:AY113041 EMBL:AY084910 IPI:IPI00524958
PIR:T48598 RefSeq:NP_568296.1 UniGene:At.5163
ProteinModelPortal:Q8W575 SMR:Q8W575 IntAct:Q8W575 STRING:Q8W575
PaxDb:Q8W575 PRIDE:Q8W575 DNASU:831275 EnsemblPlants:AT5G14250.1
GeneID:831275 KEGG:ath:AT5G14250 TAIR:At5g14250 eggNOG:NOG249849
HOGENOM:HOG000030451 InParanoid:Q8W575 KO:K12177 OMA:DRALYFF
PhylomeDB:Q8W575 ProtClustDB:CLSN2689667 Genevestigator:Q8W575
Uniprot:Q8W575
Length = 429
Score = 119 (46.9 bits), Expect = 0.00037, P = 0.00037
Identities = 47/203 (23%), Positives = 92/203 (45%)
Query: 197 EAHSNQQFCRYLFYLGKIRTIQLEYTDAKESLLQAARKAPVAALG-FRVQCNKWAIIVRL 255
E + F Y +Y G I I L+ LL AP+ + ++ K I+V L
Sbjct: 173 EIDQPRDFFLYSYYGGMI-CIGLKRFQKALELLYNVVTAPMHQVNAIALEAYKKYILVSL 231
Query: 256 LL-GE----IPE-RTVFMQKGMEKALRPYFELTNAVRIGDLELFKSVAEKFSSTFSSDRT 309
+ G+ +P+ + Q+ + PY EL N G + +++ ++ F D+
Sbjct: 232 IHNGQFTNTLPKCASTAAQRSFKNYTGPYIELGNCYNDGKIGELEALVVARNAEFEEDKN 291
Query: 310 NNLIVRLRHNVIRTGLRNISISYSRISLADVAKKLRLDSANPVADAESIVSKAIRDGAID 369
L+ + ++ + + ++ Y +SL D+A ++L +A +AE V + I+DG I
Sbjct: 292 LGLVKQAVSSLYKRNILRLTQKYLTLSLQDIANMVQLGNAK---EAEMHVLQMIQDGQIH 348
Query: 370 ATVDHANGWMVSKETGDIYSTNE 392
A ++ +G + E + Y ++E
Sbjct: 349 ALINQKDGMVRFLEDPEQYKSSE 371
>DICTYBASE|DDB_G0284241 [details] [associations]
symbol:DDB_G0284241 "proteasome component region PCI
(PINT) domain-containing protein" species:44689 "Dictyostelium
discoideum" [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR000717 Pfam:PF01399 dictyBase:DDB_G0284241
GenomeReviews:CM000153_GR EMBL:AAFI02000064 eggNOG:COG5600
InterPro:IPR013143 SMART:SM00753 OMA:YAFRNCP RefSeq:XP_638668.1
PRIDE:Q54PX7 EnsemblProtists:DDB0305019 GeneID:8624497
KEGG:ddi:DDB_G0284241 ProtClustDB:CLSZ2497181 Uniprot:Q54PX7
Length = 430
Score = 116 (45.9 bits), Expect = 0.00080, P = 0.00080
Identities = 43/194 (22%), Positives = 89/194 (45%)
Query: 194 PRFEAHSNQQFCRYLFYLGKIRTIQLEYTDAKESLLQAARKAPVAALGFRVQCNKWAIIV 253
P E++ Q Y F+ G++ +Y A+E LL A K P ++ NK I++
Sbjct: 232 PTLESYPLNQVITYRFFNGRLSVFNGQYKKAQEELLYAFNKCPNDSIK-----NKRLILL 286
Query: 254 RLLLGEIPERTVFMQKGM-EK-ALRPYFELTNAVRIGDLELFKSVAEKFSSTFSSDRTNN 311
L+ ++ E+ F +K + EK L + ++ +++ G+++ F + F S
Sbjct: 287 FLVPMQL-EQCKFPKKSLLEKFKLTQFIDIVQSIKSGNIKQFNECLSTHQNFFISKGIYL 345
Query: 312 LIVRLRHNVIRTGLRNISI--SYSRISLADVAKKLRL--DSANPVADAESIVSKAIRDGA 367
++ +L+ V R + + + + RI + + L+ + A + + E I+S I +G
Sbjct: 346 ILEKLKIIVYRNLFKKVHLITTGQRIPIGNFVSALKWMENDAIDIDETECILSNLIYNGY 405
Query: 368 IDATVDHANGWMVS 381
+ + H +VS
Sbjct: 406 LKGYISHKVALVVS 419
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.134 0.382 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 453 420 0.00083 118 3 11 22 0.49 33
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 36
No. of states in DFA: 604 (64 KB)
Total size of DFA: 235 KB (2129 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 35.50u 0.10s 35.60t Elapsed: 00:00:01
Total cpu time: 35.51u 0.10s 35.61t Elapsed: 00:00:02
Start: Tue May 21 05:02:10 2013 End: Tue May 21 05:02:12 2013