Query 012935
Match_columns 453
No_of_seqs 206 out of 611
Neff 5.2
Searched_HMMs 29240
Date Mon Mar 25 19:05:21 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012935.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/012935hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ozb_B U4/U6 small nuclear rib 100.0 2.7E-88 9.3E-93 663.3 21.1 254 50-303 5-260 (260)
2 3icx_A PRE mRNA splicing prote 100.0 3.5E-85 1.2E-89 638.0 18.9 244 61-307 3-247 (255)
3 3pla_A NOP5, PRE mRNA splicing 100.0 2.9E-81 9.9E-86 639.3 18.2 269 30-307 111-380 (388)
4 2nnw_A NOP5/NOP56 related prot 100.0 9.1E-79 3.1E-83 620.9 19.4 264 29-302 111-376 (376)
5 1nt2_B Conserved hypothetical 100.0 1.9E-62 6.4E-67 477.8 7.7 207 28-303 46-257 (258)
6 3gqu_A NOP5P protein; RNA bind 100.0 2.3E-50 7.8E-55 369.4 4.0 132 170-304 18-149 (169)
7 3id6_A NOP5, PRE mRNA splicing 100.0 5.5E-36 1.9E-40 294.2 14.3 130 58-187 133-263 (268)
8 4fbj_A CIF, hypothetical prote 74.6 1.4 4.7E-05 42.1 2.3 56 202-258 99-165 (261)
9 3efy_A CIF (cell cycle inhibit 65.3 2.1 7.3E-05 39.1 1.4 50 209-258 44-98 (195)
10 2cly_C ATP synthase coupling f 63.5 10 0.00035 30.5 4.9 49 33-97 10-62 (77)
11 4f8c_A Cycle inhibiting factor 57.5 3.5 0.00012 39.5 1.4 50 209-258 138-192 (275)
12 3eir_A Putative ATP/GTP bindin 51.3 4.8 0.00016 38.5 1.2 50 209-258 142-196 (281)
13 1kea_A Possible G-T mismatches 32.1 1.8E+02 0.0061 26.8 8.8 36 75-114 5-43 (221)
14 2a1j_A DNA repair endonuclease 21.4 45 0.0015 25.0 2.0 34 193-226 12-46 (63)
No 1
>2ozb_B U4/U6 small nuclear ribonucleoprotein PRP31; RNA-protein complex, ribonucleoprotein particle (RNP), PRE-M splicing, U4/U6 DI-snRNA, U4/U6 DI-snRNP; 2.60A {Homo sapiens} SCOP: a.183.1.1 PDB: 3siu_B 3siv_B
Probab=100.00 E-value=2.7e-88 Score=663.26 Aligned_cols=254 Identities=54% Similarity=0.861 Sum_probs=233.7
Q ss_pred CCCCCCCCCCcchhHHHHhhhhHHHHHHHHHHHHHHHHHHhhccCccccccccChHHHHHHHHHhcCCCCCC--cccccc
Q 012935 50 SNHGMVLEDDPEYQLIVDCNVLSVDIENEIVIIHNFIRDKYRLKFPELESLVHHPIDYARVVKKIGNEMDLT--LVDLEG 127 (453)
Q Consensus 50 ~~~~~~~e~~pey~lIv~~n~L~~~Id~EI~~~h~~iRd~Ys~~FPELeslv~~~~~Y~k~V~~ign~~dl~--~~~L~~ 127 (453)
+...++++++|||++|+|||+|+++||+|||.+|+||||||+||||||++||+||++|+++|+.|||+.+++ ..+|.+
T Consensus 5 ~~~~~~~e~~~eY~~Ivqa~~lld~idkein~~~~rlre~Y~~~FPEL~~lv~~~~~Y~~~V~~ig~~~~~~~~~~~L~~ 84 (260)
T 2ozb_B 5 SEVMGPVEAAPEYRVIVDANNLTVEIENELNIIHKFIRDKYSKRFPELESLVPNALDYIRTVKELGNSLDKCKNNENLQQ 84 (260)
T ss_dssp -------CCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCTTHHHHCCSHHHHHHHHHHHTTCGGGCTTCTTGGG
T ss_pred ccccCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcCccHHHHhcCHHHHHHHHHHhCCchhhccchHHHHH
Confidence 345688999999999999999999999999999999999999999999999999999999999999999876 456999
Q ss_pred cCChhHHHHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCchhHhhchHHHHHHHHHhCC
Q 012935 128 LLPSAIIMVVSVTASTTSGKPLPEDVLQKTIDACDRALALDAAKKKVLDFVESRMSYIAPNLSAIVGSAVAAKLMGTAGG 207 (453)
Q Consensus 128 iL~~~~imvisv~Asts~G~~Ls~~dl~~i~~ac~~i~~L~~~r~~i~~yvesrM~~iAPNLsaLvG~~iaArLi~~AGg 207 (453)
+|+++++|+|+++|++|+|.+||++|+.+|..+|+++++|+++|++|.+||++||..||||||+|||+.||||||++|||
T Consensus 85 iL~~~~~~~i~~aA~~S~G~~ls~~dl~~i~~~~~~v~~L~~~r~~l~~yl~~rM~~iAPNLtaLvG~~vaArLI~~AGs 164 (260)
T 2ozb_B 85 ILTNATIMVVSVTASTTQGQQLSEEELERLEEACDMALELNASKHRIYEYVESRMSFIAPNLSIIIGASTAAKIMGVAGG 164 (260)
T ss_dssp TSCHHHHHHHHHHHHSCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHTS
T ss_pred HcCHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHhCcHHHHHHHHHhCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cchhcCCCchhhhhhhhhcccccccccCCCCCccceEeeCccccCCCchhhhhHHHHHHhHHHHHhhcccCCCCCCCchh
Q 012935 208 LSALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYLEQTEIFQSTPPPLRMRACRLLAAKSTLAARVDSTRGDPSGTAG 287 (453)
Q Consensus 208 L~~LAkmPAcnIq~LGaeK~~~~g~st~~~~p~~G~Iy~s~lVq~~P~~~r~kaaR~lAaK~aLAARvD~~~~~~~g~~G 287 (453)
|++||||||||||+|||+|++|+||++++.+|||||||||++||++||++||||+|+||+||+||||||+|+++++|.+|
T Consensus 165 L~~Lak~PastiqiLGaeKalf~~l~t~~~~pk~G~Iy~~~~V~~~p~~~rgk~~R~lA~K~alAaRiD~~~~~~~~~~G 244 (260)
T 2ozb_B 165 LTNLSKMPACNIMLLGAQRKTLSGFSSTSVLPHTGYIYHSDIVQSLPPDLRRKAARLVAAKCTLAARVDSFHESTEGKVG 244 (260)
T ss_dssp HHHHHTSCHHHHTTTTCC----------CCCTTCCTTTTSHHHHTSCGGGHHHHHHHHHHHHHHHHHHHHTTCSTTSHHH
T ss_pred HHHHhhCCcHHHHHhcccHHHHHhhccCCCCCCeeeEeCCHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcC
Q 012935 288 RSFREEIHKKIEKWQE 303 (453)
Q Consensus 288 ~~lreei~~ki~Kl~e 303 (453)
.+||++|++||+||+|
T Consensus 245 ~~lr~~ie~rl~~~~e 260 (260)
T 2ozb_B 245 YELKDEIERKFDKWQE 260 (260)
T ss_dssp HHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHhcC
Confidence 9999999999999987
No 2
>3icx_A PRE mRNA splicing protein; C/D guide RNA, 2'-O-methylation, coiled-coil, RNA binding PR; 3.10A {Sulfolobus solfataricus}
Probab=100.00 E-value=3.5e-85 Score=638.00 Aligned_cols=244 Identities=30% Similarity=0.441 Sum_probs=217.9
Q ss_pred chhHHHHhhhhHHHHHHHHHHHHHHHHHHhhccCccccccccChHHHHHHHHHhcCCCCCCccccccc-CChhHHHHHHH
Q 012935 61 EYQLIVDCNVLSVDIENEIVIIHNFIRDKYRLKFPELESLVHHPIDYARVVKKIGNEMDLTLVDLEGL-LPSAIIMVVSV 139 (453)
Q Consensus 61 ey~lIv~~n~L~~~Id~EI~~~h~~iRd~Ys~~FPELeslv~~~~~Y~k~V~~ign~~dl~~~~L~~i-L~~~~imvisv 139 (453)
-+++|||||+|+++||+|||.+|+||||||+||||||++||+||++|+++|+.|||+.+++..+|+++ ++++++++|++
T Consensus 3 ~D~~Iiqai~lld~iDkein~~~~rvrewY~~~FPEL~~iv~d~~~Yak~V~~ig~~~~~~~~~l~~l~l~~~~~~~i~~ 82 (255)
T 3icx_A 3 RDLLAIQAVRAMDDIDKTINLFSERLREWYSIHFPELDKLIEDHEEYATIVSRFGDRGFLTIDSLKELGFNEQRINRILD 82 (255)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTHHHHCCCHHHHHHHHHHTCSGGGCCHHHHHTTTCCHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcCcchHhhcCCHHHHHHHHHHHcCCCCCChhhHHHccCCHHHHHHHHH
Confidence 36899999999999999999999999999999999999999999999999999999999999999999 89999999999
Q ss_pred HhccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCchhHhhchHHHHHHHHHhCCcchhcCCCchhh
Q 012935 140 TASTTSGKPLPEDVLQKTIDACDRALALDAAKKKVLDFVESRMSYIAPNLSAIVGSAVAAKLMGTAGGLSALAKMPACNV 219 (453)
Q Consensus 140 ~Asts~G~~Ls~~dl~~i~~ac~~i~~L~~~r~~i~~yvesrM~~iAPNLsaLvG~~iaArLi~~AGgL~~LAkmPAcnI 219 (453)
+|++|+|.+||++|+.+|.++|+++++|+++|++|.+||++||..||||||+|||+.||||||++||||++|||||||||
T Consensus 83 aa~~S~G~~ls~~dl~~i~~~~~~v~~L~~~r~~l~~yl~srM~~iAPNLsaLvG~~vaArLIs~AGgL~~LAk~PAstI 162 (255)
T 3icx_A 83 AAKKSIGADISEDDLSAMRMIANTILDLYNIRRNLNNYLEGVMKEVAPNVTALVGPALGARLLSIAGSLDELAKMPASTI 162 (255)
T ss_dssp HHHTCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHCHHHHHHHHHHHSSHHHHTTSCHHHH
T ss_pred HHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcHHHHhccHHHHHHHHHcCCHHHHhhCChHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhcccccccccCCCCCccceEeeCccccCCCchhhhhHHHHHHhHHHHHhhcccCCCCCCCchhHHHHHHHHHHHH
Q 012935 220 QLLGAKKKNLAGFSTATSQFRVGYLEQTEIFQSTPPPLRMRACRLLAAKSTLAARVDSTRGDPSGTAGRSFREEIHKKIE 299 (453)
Q Consensus 220 q~LGaeK~~~~g~st~~~~p~~G~Iy~s~lVq~~P~~~r~kaaR~lAaK~aLAARvD~~~~~~~g~~G~~lreei~~ki~ 299 (453)
|+|||||++|++|+|++.+||||||||||+||++||++||||+|+||+||+||||||+|++ ..+|.+||++|++||+
T Consensus 163 qiLGAeKalfr~lkt~~~tPk~G~Iy~s~~V~~ap~~~rgkiaR~LAaK~aLAARiD~~~g---~~~G~~lre~ie~ri~ 239 (255)
T 3icx_A 163 QVLGAEKALFRALRSGGRPPKHGIIFQYPAIHTSPRWQRGKIARALAAKLAIAARVDAFSG---RFIGDQLNEQLKKRID 239 (255)
T ss_dssp TTCC-------------------GGGGSHHHHTSCGGGHHHHHHHHHHHHHHHHHHHHTTC---CCCHHHHHHHHHHHHH
T ss_pred HHhhhhhHHHHHhccCCCCCCeeEEecCHhhhcCCHHHHHHHHHHHHHHHHHHHhhcccCC---cccCHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999973 3469999999999999
Q ss_pred HhcCCCCC
Q 012935 300 KWQEPPPA 307 (453)
Q Consensus 300 Kl~epP~~ 307 (453)
+|+||...
T Consensus 240 kl~e~~~~ 247 (255)
T 3icx_A 240 EIKEKFAQ 247 (255)
T ss_dssp HHHTTC--
T ss_pred HHhCcccc
Confidence 99999654
No 3
>3pla_A NOP5, PRE mRNA splicing protein; RNA-binding, SAM, box C/D RNA; HET: SAH; 3.15A {Sulfolobus solfataricus} PDB: 3id5_A*
Probab=100.00 E-value=2.9e-81 Score=639.28 Aligned_cols=269 Identities=27% Similarity=0.415 Sum_probs=247.8
Q ss_pred chHHHHHHHHHHHHhcCCCCCCCCCCCCCCcchhHHHHhhhhHHHHHHHHHHHHHHHHHHhhccCccccccccChHHHHH
Q 012935 30 QRFTDIMQKVEAALQNGSDISNHGMVLEDDPEYQLIVDCNVLSVDIENEIVIIHNFIRDKYRLKFPELESLVHHPIDYAR 109 (453)
Q Consensus 30 ~~~~~~l~~i~~~~~~~~~~~~~~~~~e~~pey~lIv~~n~L~~~Id~EI~~~h~~iRd~Ys~~FPELeslv~~~~~Y~k 109 (453)
..|...+..+.+...+.. -....+..+++|||||+|+++||+|||.+|+||||||+||||||++||+||++|++
T Consensus 111 ~d~~~~~~~l~~~~sr~k------vk~~~~k~D~~Ivqai~lld~iDkein~~~~rvrewY~~hFPEL~~iV~d~~~Yak 184 (388)
T 3pla_A 111 EDYYNFLHELSLEYTRRK------LRSAAQKRDLLAIQAVRAMDDIDKTINLFSERLREWYSIHFPELDKLIEDHEEYAT 184 (388)
T ss_dssp HHHHHHHHHHHHHHHHHH------HHHHHTCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCGGGTTTCCCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH------HhhCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcchhhhcCCHHHHHH
Confidence 355566665555444311 11234457899999999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCCCCCccccccc-CChhHHHHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCc
Q 012935 110 VVKKIGNEMDLTLVDLEGL-LPSAIIMVVSVTASTTSGKPLPEDVLQKTIDACDRALALDAAKKKVLDFVESRMSYIAPN 188 (453)
Q Consensus 110 ~V~~ign~~dl~~~~L~~i-L~~~~imvisv~Asts~G~~Ls~~dl~~i~~ac~~i~~L~~~r~~i~~yvesrM~~iAPN 188 (453)
+|+.|||+.+++..+|+++ +|.+++++|+++|++|+|.+||++|+.+|..+|+++++|+++|++|.+||++||..||||
T Consensus 185 ~V~~ignr~~~~~~~l~~l~l~~~~~~~I~~aA~~SmG~~ls~~dl~~I~~~~~~v~~L~e~R~~L~~Yl~srM~~iAPN 264 (388)
T 3pla_A 185 IVSRFGDRGFLTIDSLKELGFNEQRINRILDAAKKSIGADISEDDLSAMRMIANTILDLYNIRRNLNNYLEGVMKEVAPN 264 (388)
T ss_dssp HHHHTCSGGGCCHHHHHTTTCCHHHHHHHHHHHHTCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHH
T ss_pred HHHHhcCcccCChhhHhhcCCCHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCc
Confidence 9999999999999999999 899999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHhhchHHHHHHHHHhCCcchhcCCCchhhhhhhhhcccccccccCCCCCccceEeeCccccCCCchhhhhHHHHHHhH
Q 012935 189 LSAIVGSAVAAKLMGTAGGLSALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYLEQTEIFQSTPPPLRMRACRLLAAK 268 (453)
Q Consensus 189 LsaLvG~~iaArLi~~AGgL~~LAkmPAcnIq~LGaeK~~~~g~st~~~~p~~G~Iy~s~lVq~~P~~~r~kaaR~lAaK 268 (453)
||+|||+.||||||++||||++||||||||||+|||||++|++|+|++.+|||||||||++|+++||++||||+|+||+|
T Consensus 265 LsaLvG~~vaArLIs~AGgL~~LAK~PAstIQiLGAeKalfr~Lkt~~~tPk~G~Iy~s~~V~~ap~~~rgKiaR~LAaK 344 (388)
T 3pla_A 265 VTALVGPALGARLLSIAGSLDELAKMPASTIQVLGAEKALFRALRSGGRPPKHGIIFQYPAIHTSPRWQRGKIARALAAK 344 (388)
T ss_dssp HHHHHHHHHHHHHHHHHSSHHHHHTSCHHHHTTSSCHHHHHHHHHHTCCCCSCSGGGGSHHHHHSCHHHHHHHHHHHHHH
T ss_pred HHHHhccHHHHHHHHHcCCHHHHhhCChHHHHHhhhhhHHHHHhccCCCCCCeeEEecCHhhhhCCHHHhHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcccCCCCCCCchhHHHHHHHHHHHHHhcCCCCC
Q 012935 269 STLAARVDSTRGDPSGTAGRSFREEIHKKIEKWQEPPPA 307 (453)
Q Consensus 269 ~aLAARvD~~~~~~~g~~G~~lreei~~ki~Kl~epP~~ 307 (453)
|+||||||+|++ ..+|.+||++|++||++|+||...
T Consensus 345 ~aLAARiD~~~g---~~~G~~lreeie~ri~kl~e~~~~ 380 (388)
T 3pla_A 345 LAIAARVDAFSG---RFIGDQLNEQLKKRIDEIKEKFAQ 380 (388)
T ss_dssp HHHHHHHHHTCC---CCCHHHHHHHHHHHHHHHHCC---
T ss_pred HHHHHhhcccCC---cccCHHHHHHHHHHHHHHhCcccc
Confidence 999999999973 357999999999999999999654
No 4
>2nnw_A NOP5/NOP56 related protein; box C/D; 2.70A {Pyrococcus furiosus} PDB: 3nvi_A 3nmu_A 3nvk_A* 3nvm_A
Probab=100.00 E-value=9.1e-79 Score=620.86 Aligned_cols=264 Identities=26% Similarity=0.380 Sum_probs=235.8
Q ss_pred cchHHHHHHHHHHHHhcCCCCCCCCCCCCCCcchhHHHHhhhhHHHHHHHHHHHHHHHHHHhhccCccccccccChHHHH
Q 012935 29 SQRFTDIMQKVEAALQNGSDISNHGMVLEDDPEYQLIVDCNVLSVDIENEIVIIHNFIRDKYRLKFPELESLVHHPIDYA 108 (453)
Q Consensus 29 s~~~~~~l~~i~~~~~~~~~~~~~~~~~e~~pey~lIv~~n~L~~~Id~EI~~~h~~iRd~Ys~~FPELeslv~~~~~Y~ 108 (453)
...|...+..+.+...+.. -....+..|++|+|||+++++||+|||.+|+||||||+||||||++||+||.+|+
T Consensus 111 ~~d~~~~~~~l~h~~sr~K------vk~~~~k~D~~Iiqai~llddlDkeIn~~~~rlrewY~~~FPEL~~lV~d~~~Y~ 184 (376)
T 2nnw_A 111 GENWFEEYYKVGVALTRMR------IQEQSGARDKMVIQAIEALDDVDKVINLLVARLREWYSLHFPELDELLPKHPQYV 184 (376)
T ss_dssp CSSHHHHHHHHHHHHHHHH------SCCCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCTTHHHHCCSHHHHH
T ss_pred hhHHHHHHHHHHHHHHHhh------hccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCccHHhhcCCHHHHH
Confidence 3467777777776655321 1245667899999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCCCccccccc-CChhHHHHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCC
Q 012935 109 RVVKKIGNEMDLTLVDLEGL-LPSAIIMVVSVTASTTSGKPLPEDVLQKTIDACDRALALDAAKKKVLDFVESRMSYIAP 187 (453)
Q Consensus 109 k~V~~ign~~dl~~~~L~~i-L~~~~imvisv~Asts~G~~Ls~~dl~~i~~ac~~i~~L~~~r~~i~~yvesrM~~iAP 187 (453)
++|+.|||+.+++..+|.++ |+++++|+|+++|++|+|.+||++|+++|..+|+++++|+++|++|.+||++||..|||
T Consensus 185 k~V~~ig~~~~l~~~~L~~i~l~~~~~~~I~~aA~~S~G~~ls~~dl~~i~~~~~~v~~L~~~R~~l~~yl~~rM~~iAP 264 (376)
T 2nnw_A 185 AFVKTVGHRDNINEEVLRELGLSEEKIKKILEAKEKTMGAWMDQTDIEVVRQLAEEIDRLYQLRKKLEDYIDRAMDDVAP 264 (376)
T ss_dssp HHHHHTCSGGGCCSHHHHHTTCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH
T ss_pred HHHHHhCCccccCHhhHHHcCCCHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 99999999999998899999 99999999999999999999999999999999999999999999999999999999999
Q ss_pred chhHhhchHHHHHHHHHhCCcchhcCCCchhhhhhhhhcccccccccCCCCCccceEeeCccccCCCchhhhhHHHHHHh
Q 012935 188 NLSAIVGSAVAAKLMGTAGGLSALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYLEQTEIFQSTPPPLRMRACRLLAA 267 (453)
Q Consensus 188 NLsaLvG~~iaArLi~~AGgL~~LAkmPAcnIq~LGaeK~~~~g~st~~~~p~~G~Iy~s~lVq~~P~~~r~kaaR~lAa 267 (453)
|||+|||+.+|||||++||||++||||||||||+|||||++|++|+|++.+||||||||||+||++||++||||+|+||+
T Consensus 265 NLsaLvG~~vaArLIs~AGgL~~LAK~PAstIQiLGAeKalf~~lkt~~~tPk~G~Iy~s~~V~~ap~~~kgKiaR~LAa 344 (376)
T 2nnw_A 265 NLKALVGAKLAARLISLAGGLRELAMMPSSTIQVLGAEKALFRHLRTGAKPPKHGVIYQYPAINRSPWWQRGKIARALAG 344 (376)
T ss_dssp HHHHHHCHHHHHHHHHHHTSHHHHHHSCHHHHHTTTCC-------------CCCCGGGGSHHHHTSCHHHHHHHHHHHHH
T ss_pred CHHHHhChHHHHHHHHHhCCHHHHhhCChHHHHHhccchhhHHHhccCCCCCCceEEeCCHhhccCCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcccCCCCCCCch-hHHHHHHHHHHHHHhc
Q 012935 268 KSTLAARVDSTRGDPSGTA-GRSFREEIHKKIEKWQ 302 (453)
Q Consensus 268 K~aLAARvD~~~~~~~g~~-G~~lreei~~ki~Kl~ 302 (453)
||+||||||+|+ |.+ |.+||++|++||++|.
T Consensus 345 K~aLAARiD~~~----g~~~G~~lre~ie~rl~~ik 376 (376)
T 2nnw_A 345 KLAIAARVDYFS----GEYIAEELKKELEARIREIK 376 (376)
T ss_dssp HHHHHHHHHHHT----CCCCHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHhhcC----CcccCHHHHHHHHHHHHHhC
Confidence 999999999994 566 9999999999999984
No 5
>1nt2_B Conserved hypothetical protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: a.183.1.1
Probab=100.00 E-value=1.9e-62 Score=477.81 Aligned_cols=207 Identities=25% Similarity=0.378 Sum_probs=173.7
Q ss_pred ccchHHHHHHHHHHHHhcCCCCCCCCCCCCCCcchhHHHHhhhhHHHHHHHHHHHHHHHHHHhhccCccccccccChHHH
Q 012935 28 KSQRFTDIMQKVEAALQNGSDISNHGMVLEDDPEYQLIVDCNVLSVDIENEIVIIHNFIRDKYRLKFPELESLVHHPIDY 107 (453)
Q Consensus 28 ~s~~~~~~l~~i~~~~~~~~~~~~~~~~~e~~pey~lIv~~n~L~~~Id~EI~~~h~~iRd~Ys~~FPELeslv~~~~~Y 107 (453)
+..+|.+.|..+.+...+.. -..+.+.+|++|||||+|+++||+|||.+|+||||||+|
T Consensus 46 ~~~~y~~~l~~~~~~~sr~k------vk~~~~~~D~~Iiqai~lld~idkein~~~~rvrewY~~--------------- 104 (258)
T 1nt2_B 46 LGKDYYRILRKTALAVSEKM------VEKELRREDRYVVALVKALEEIDESINMLNEKLEDIRAV--------------- 104 (258)
T ss_dssp SCSTHHHHHHHHHHHHHHHH------HHHHHHTHHHHHHHHHHHHHHHHHHHHHTTTTHHHHHTT---------------
T ss_pred CHHHHHHHHHHHHHHHHHHH------HhcCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC---------------
Confidence 45678888888877554311 113456699999999999999999999999999999996
Q ss_pred HHHHHHhcCCCCCCcccccccCChhHHHHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCC
Q 012935 108 ARVVKKIGNEMDLTLVDLEGLLPSAIIMVVSVTASTTSGKPLPEDVLQKTIDACDRALALDAAKKKVLDFVESRMSYIAP 187 (453)
Q Consensus 108 ~k~V~~ign~~dl~~~~L~~iL~~~~imvisv~Asts~G~~Ls~~dl~~i~~ac~~i~~L~~~r~~i~~yvesrM~~iAP 187 (453)
.+| +||+ ++|+++++|+++|++|.+||++||..|||
T Consensus 105 ----------------------------------~~S---~ise-------~~~~~v~~L~~~r~~l~~yl~srM~~iAP 140 (258)
T 1nt2_B 105 ----------------------------------KES---EITE-------KFEKKIRELRELRRDVEREIEEVMEKIAP 140 (258)
T ss_dssp ----------------------------------CCC---TTHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHSH
T ss_pred ----------------------------------CCC---cCCH-------HHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 012 5554 89999999999999999999999999999
Q ss_pred chhHhhchHHHHHHHHHhCCcchhcCCCchhhhhhhhhccccccc---ccC--CCCCccceEeeCccccCCCchhhhhHH
Q 012935 188 NLSAIVGSAVAAKLMGTAGGLSALAKMPACNVQLLGAKKKNLAGF---STA--TSQFRVGYLEQTEIFQSTPPPLRMRAC 262 (453)
Q Consensus 188 NLsaLvG~~iaArLi~~AGgL~~LAkmPAcnIq~LGaeK~~~~g~---st~--~~~p~~G~Iy~s~lVq~~P~~~r~kaa 262 (453)
|||+|||+.||||||++||||++||||||||||+|||+|++|+|| +|+ +.+||||||||||+||++||++||||+
T Consensus 141 NLsaLvG~~vaArLI~~AGgL~~LAk~PAstIqiLGAeKalf~~l~~~~t~~~~~~pk~G~Iy~s~~V~~ap~~~rgK~a 220 (258)
T 1nt2_B 141 NMTELVGAKVAAKLLERAGSMERLVRLPASKIQVIGAEKSLYKAFARMKKGKKAKIPKHGIIFLHPFIRTLPKAKRGKMA 220 (258)
T ss_dssp HHHHHHCHHHHHHHHHHHCSHHHHHTCCHHHHTTSSCC--------------------CCGGGGSHHHHTSCSSSSHHHH
T ss_pred cHHHHhCcHHHHHHHHHhCCHHHHhhCCHHHHHHhccchHHHhhhhccccccCCCCCCcceEecCHHHhcCCHHHHHHHH
Confidence 999999999999999999999999999999999999999999999 888 899999999999999999999999999
Q ss_pred HHHHhHHHHHhhcccCCCCCCCchhHHHHHHHHHHHHHhcC
Q 012935 263 RLLAAKSTLAARVDSTRGDPSGTAGRSFREEIHKKIEKWQE 303 (453)
Q Consensus 263 R~lAaK~aLAARvD~~~~~~~g~~G~~lreei~~ki~Kl~e 303 (453)
|+||+||+||||||+|+ |.+|.+||++|++||++|+|
T Consensus 221 R~LAaK~aLAARiD~~~----g~~G~~lre~ie~rl~k~~e 257 (258)
T 1nt2_B 221 RFLAAKLAIAAKIDYFR----GEIDESLYESIRRRYEELRR 257 (258)
T ss_dssp HHHHHHHHHHHHHHHHT----CSCCTHHHHHHHHHHHHCC-
T ss_pred HHHHHHHHHHHHHHhhC----CcccHHHHHHHHHHHHHHhh
Confidence 99999999999999994 77999999999999999997
No 6
>3gqu_A NOP5P protein; RNA binding domain, RNA binding protein; 2.50A {Pyrococcus horikoshii} PDB: 3gqx_B
Probab=100.00 E-value=2.3e-50 Score=369.35 Aligned_cols=132 Identities=31% Similarity=0.477 Sum_probs=110.2
Q ss_pred HHHHHHHHHHhccccCCCchhHhhchHHHHHHHHHhCCcchhcCCCchhhhhhhhhcccccccccCCCCCccceEeeCcc
Q 012935 170 AKKKVLDFVESRMSYIAPNLSAIVGSAVAAKLMGTAGGLSALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYLEQTEI 249 (453)
Q Consensus 170 ~r~~i~~yvesrM~~iAPNLsaLvG~~iaArLi~~AGgL~~LAkmPAcnIq~LGaeK~~~~g~st~~~~p~~G~Iy~s~l 249 (453)
.|..|.+||++||..||||||+|||+.||||||++||||++||||||||||+||++|++|++|++.+.+||||||||||+
T Consensus 18 ~~~~L~~Yl~srM~~iAPNLsaLvG~~vaArLI~~AGgL~~LAK~PAsnIqvLGAeKalf~~l~t~~~~pk~G~Iy~s~l 97 (169)
T 3gqu_A 18 GAGGLEDYIDKAMDDVAPNLKALVGAKLGARLISLAGGLKELAMLPSSTIQVLGAEKALFRHLRTGAKPPKHGVIYQYPA 97 (169)
T ss_dssp --CCHHHHHHHHHHHHCHHHHHHHCHHHHHHHHHHHTSHHHHHTCCSHHHHTSCC----------------CCGGGGSHH
T ss_pred HHHHHHHHHHHHHHHhCCcHHHHhChHHHHHHHHHhCCHHHHhhCCHHHHHHHhhhhHHHHHHhcCCCCCCCCEEEeCHh
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCchhhhhHHHHHHhHHHHHhhcccCCCCCCCchhHHHHHHHHHHHHHhcCC
Q 012935 250 FQSTPPPLRMRACRLLAAKSTLAARVDSTRGDPSGTAGRSFREEIHKKIEKWQEP 304 (453)
Q Consensus 250 Vq~~P~~~r~kaaR~lAaK~aLAARvD~~~~~~~g~~G~~lreei~~ki~Kl~ep 304 (453)
|+++|+++|+||+|+||+||+||||||+|++ ..+|.+|+++|++||++|+|.
T Consensus 98 V~~~p~~~rgK~aR~LAaK~aLAARiD~~~g---~~~G~~lreeie~riekl~e~ 149 (169)
T 3gqu_A 98 INRSPWWQRGKIARALAGKLAIAARVDYFSG---EYIAEELKKELEARIKEIKEK 149 (169)
T ss_dssp HHTSCTTTHHHHHHHHHHHHHHHHHHHHHTC---CCCCTTHHHHHHHHHHHCCCS
T ss_pred hhcCCHHHHHHHHHHHHHHHHHHHhhcccCC---cccCHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999974 357999999999999998874
No 7
>3id6_A NOP5, PRE mRNA splicing protein; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus}
Probab=100.00 E-value=5.5e-36 Score=294.21 Aligned_cols=130 Identities=23% Similarity=0.344 Sum_probs=123.4
Q ss_pred CCcchhHHHHhhhhHHHHHHHHHHHHHHHHHHhhccCccccccccChHHHHHHHHHhcCCCCCCccccccc-CChhHHHH
Q 012935 58 DDPEYQLIVDCNVLSVDIENEIVIIHNFIRDKYRLKFPELESLVHHPIDYARVVKKIGNEMDLTLVDLEGL-LPSAIIMV 136 (453)
Q Consensus 58 ~~pey~lIv~~n~L~~~Id~EI~~~h~~iRd~Ys~~FPELeslv~~~~~Y~k~V~~ign~~dl~~~~L~~i-L~~~~imv 136 (453)
.+..+++|||||+|+++||+|||.+||||||||+||||||++||+||++||++|+.|||+.+++..+|+++ ||++++++
T Consensus 133 ~~k~D~mIIQai~llDdlDkeiN~~~mRvREWY~~hFPEL~kiV~d~~~Yak~V~~ig~r~~l~~~~l~~i~l~~~~~~~ 212 (268)
T 3id6_A 133 AQKRDLLAIQAVRAMDDIDKTINLFSERLREWYSIHFPELDKLIEDHEEYATIVSRFGDRGFLTIDSLKELGFNEQRINR 212 (268)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCTTHHHHCCCHHHHHHHHHHHCSTTSCCHHHHGGGTCCHHHHHH
T ss_pred CCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCccHHHhccCHHHHHHHHHHhCCcccCCcccHhhcCCCHHHHHH
Confidence 44579999999999999999999999999999999999999999999999999999999999999999999 99999999
Q ss_pred HHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCC
Q 012935 137 VSVTASTTSGKPLPEDVLQKTIDACDRALALDAAKKKVLDFVESRMSYIAP 187 (453)
Q Consensus 137 isv~Asts~G~~Ls~~dl~~i~~ac~~i~~L~~~r~~i~~yvesrM~~iAP 187 (453)
|+++|++|||++||++||.+|..+|+++++|+++|++|.+||++||..+|-
T Consensus 213 I~~aA~~SmG~~ise~DL~~I~~~a~~v~~L~e~R~~L~~Yl~srM~~~~~ 263 (268)
T 3id6_A 213 ILDAAKKSIGADISEDDLSAMRMIANTILDLYNIRRNLNNYLEGVMKEVAH 263 (268)
T ss_dssp HHHHHHSCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC----
T ss_pred HHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999999874
No 8
>4fbj_A CIF, hypothetical protein; effector-HOST target complex, glutamine deamidase, deamidati bacterial effector, cell cycle-protein binding complex; 1.60A {Photorhabdus luminescens subsp} PDB: 3gqj_A
Probab=74.59 E-value=1.4 Score=42.07 Aligned_cols=56 Identities=20% Similarity=0.406 Sum_probs=39.0
Q ss_pred HHHhCCc------chhcCCCchhhhhhhhhcccc-----cccccCCCCCccceEeeCccccCCCchhh
Q 012935 202 MGTAGGL------SALAKMPACNVQLLGAKKKNL-----AGFSTATSQFRVGYLEQTEIFQSTPPPLR 258 (453)
Q Consensus 202 i~~AGgL------~~LAkmPAcnIq~LGaeK~~~-----~g~st~~~~p~~G~Iy~s~lVq~~P~~~r 258 (453)
++.+|+| +.|+.||||+=-|+=-.-.-+ -.+-+..+ +..||||||||=+.+-|.+|
T Consensus 99 ~~Qt~~l~~~~faE~l~~L~s~kNyV~~VNDgrLGH~flIDiPa~~~-~r~ayiyQSDLG~Galp~lr 165 (261)
T 4fbj_A 99 MAQTGKIDGNEFAESVDQLSSAKNYVALVNDRRLGHMFLIDIPSNDQ-ETVGYIYQSDLGQGALPPLK 165 (261)
T ss_dssp HHHHSCBCHHHHHHHGGGSCTTCEEEEEEEETTTTEEEEEEECCCSS-CCEEEEECCBCSCSSSCCBC
T ss_pred hhhhcccchHHHHHHHhhhhcccCEEEEEcCCCcceeEEEecCCCCC-CcceEEEecccCCCCCccee
Confidence 4567888 678999999866553333222 12434444 99999999999998877665
No 9
>3efy_A CIF (cell cycle inhibiting factor); bacteria, virulence factor, type III secretion, E. coli, plasmid; 1.70A {Escherichia coli}
Probab=65.33 E-value=2.1 Score=39.08 Aligned_cols=50 Identities=20% Similarity=0.376 Sum_probs=35.5
Q ss_pred chhcCCCchhhhhhhhhccc-----ccccccCCCCCccceEeeCccccCCCchhh
Q 012935 209 SALAKMPACNVQLLGAKKKN-----LAGFSTATSQFRVGYLEQTEIFQSTPPPLR 258 (453)
Q Consensus 209 ~~LAkmPAcnIq~LGaeK~~-----~~g~st~~~~p~~G~Iy~s~lVq~~P~~~r 258 (453)
+.|+.||||+=-|+=-+..- +-.+-+.++.+..||||||||=+.+-|.+|
T Consensus 44 E~l~~l~s~knyV~~VNDgrLGH~fliDiP~~~n~~r~ayiyQSDLG~galp~lr 98 (195)
T 3efy_A 44 ERLSCMPECKSFVLRVNDGALGHAYIVDIPKGENSCRPAFLYQSDLGEGVTRKLR 98 (195)
T ss_dssp HHHHTCCTTSEEEEEEEETTTTEEEEEEECSCCSTTCEEEEECCBCSSSSSCCBC
T ss_pred HHHhhhhcccCEEEEEcCCCcceeEEEecCCCCCCCcceEEEecccCCcccccee
Confidence 56788999986655333322 223556667899999999999998876654
No 10
>2cly_C ATP synthase coupling factor 6, mitochondrial; mitochondrion, ION transport, CF(0), stator, transport, acetylation, hydrogen ION transport; 2.8A {Bos taurus} SCOP: f.45.1.1 PDB: 1vzs_A 2wss_V*
Probab=63.55 E-value=10 Score=30.48 Aligned_cols=49 Identities=22% Similarity=0.470 Sum_probs=35.0
Q ss_pred HHHHHHHHHHHhcCCCCCCCCCCCCCCcchhHHHHhhhhHHHHHHHHHHHHHHHHHHhhc----cCccc
Q 012935 33 TDIMQKVEAALQNGSDISNHGMVLEDDPEYQLIVDCNVLSVDIENEIVIIHNFIRDKYRL----KFPEL 97 (453)
Q Consensus 33 ~~~l~~i~~~~~~~~~~~~~~~~~e~~pey~lIv~~n~L~~~Id~EI~~~h~~iRd~Ys~----~FPEL 97 (453)
+-.|.+|++|..+.. ..+++++.+|||+ .++++|++ +|.-.|+. .||+.
T Consensus 10 qLFldKIREYk~Ks~---~~G~lVD~~Pe~~---------kel~~el~----kL~~~YGggDm~kFP~F 62 (77)
T 2cly_C 10 KLFVDKIREYRTKRQ---TSGGPVDAGPEYQ---------QDLDRELF----KLKQMYGKADMNTFPNF 62 (77)
T ss_dssp HHHHHHHHHHHHHHT---CCSSSSSCCTHHH---------HHHHHHHH----HHHHHHCSSCTTSCCCC
T ss_pred HHHHHHHHHHHHhcc---cCCCCCCCCHHHH---------HHHHHHHH----HHHHHHCcchHhhCCCC
Confidence 346889999976632 2378899999986 35667766 68888884 56653
No 11
>4f8c_A Cycle inhibiting factor; effector-HOST target complex, glutamine deamidase, deamidati bacterial effector, cell cycle-protein binding complex; 1.95A {Yersinia pseudotuberculosis}
Probab=57.50 E-value=3.5 Score=39.47 Aligned_cols=50 Identities=22% Similarity=0.339 Sum_probs=35.5
Q ss_pred chhcCCCchhhhhhhhhccc-----ccccccCCCCCccceEeeCccccCCCchhh
Q 012935 209 SALAKMPACNVQLLGAKKKN-----LAGFSTATSQFRVGYLEQTEIFQSTPPPLR 258 (453)
Q Consensus 209 ~~LAkmPAcnIq~LGaeK~~-----~~g~st~~~~p~~G~Iy~s~lVq~~P~~~r 258 (453)
+.|+.||||+=-|+=-...- +-.+-+.++.+..||||||||=+.+-|.+|
T Consensus 138 E~l~~L~s~KnyV~~VNDgrLGH~flIDiPa~~n~~r~ayiyQSDLG~Galp~lr 192 (275)
T 4f8c_A 138 ERLASLPAHKNFILRVNDGGLGHAYVIDFPATTNPSRDAFLYQSDLGEGVTREVR 192 (275)
T ss_dssp HHHHTCCTTSEEEEEEEETTTTEEEEEEECCCSSSSCEEEEECCBCCCSSSCCBC
T ss_pred HHHhhhhcccCEEEEEcCCCcceeEEEecCCCCCCCcceEEEecccCCCCCccee
Confidence 56788999976655333322 223556667899999999999998877665
No 12
>3eir_A Putative ATP/GTP binding protein; papain-like fold, unknown function; 2.10A {Burkholderia pseudomallei} PDB: 3eit_A 3gqm_A 4hcp_A 4hcn_A
Probab=51.28 E-value=4.8 Score=38.47 Aligned_cols=50 Identities=14% Similarity=0.216 Sum_probs=32.4
Q ss_pred chhcCCCchhhhhhhhhcccc-----cccccCCCCCccceEeeCccccCCCchhh
Q 012935 209 SALAKMPACNVQLLGAKKKNL-----AGFSTATSQFRVGYLEQTEIFQSTPPPLR 258 (453)
Q Consensus 209 ~~LAkmPAcnIq~LGaeK~~~-----~g~st~~~~p~~G~Iy~s~lVq~~P~~~r 258 (453)
+.|+.||||+=-|+=-+..-+ -.+-+..+.+..||||||||=+.+-|.+|
T Consensus 142 E~l~~L~s~KNyV~~VNDgrLGH~flIDiPa~~~~~r~ayiYQSDLG~Galp~lr 196 (281)
T 3eir_A 142 EHVNTLDSHKNYVVIVNDGRLGHKFLIDLPALTQGPRTAYIIQSDLGGGALPAVR 196 (281)
T ss_dssp HHHTTSCTTSEEEEEEEETTTTEEEEEEECCC----CCBEEECCBCCSSSSCCBC
T ss_pred HHHhhhhcccCEEEEEcCCCcceeEEEeccCCCCCCcceEEEecccCCCcCccee
Confidence 468899999866553333221 23555666789999999999998877665
No 13
>1kea_A Possible G-T mismatches repair enzyme; DNA repair, DNA glycosylase, DNA mismatch, methylation; 2.00A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: a.96.1.2
Probab=32.06 E-value=1.8e+02 Score=26.76 Aligned_cols=36 Identities=17% Similarity=0.315 Sum_probs=22.9
Q ss_pred HHHHHHHHHHHHHHHhhcc---CccccccccChHHHHHHHHHh
Q 012935 75 IENEIVIIHNFIRDKYRLK---FPELESLVHHPIDYARVVKKI 114 (453)
Q Consensus 75 Id~EI~~~h~~iRd~Ys~~---FPELeslv~~~~~Y~k~V~~i 114 (453)
.+.++..+...|.+||..+ ||.+. -.+| |--+|..|
T Consensus 5 ~~~~~~~~~~~l~~~~~~~~~~~pw~~--~~~p--fe~lv~~I 43 (221)
T 1kea_A 5 TNKKRKVFVSTILTFWNTDRRDFPWRH--TRDP--YVILITEI 43 (221)
T ss_dssp HHHHHHHHHHHHHHHHHHSCCCCGGGG--CCCH--HHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHhhhhCcCCC--CCCH--HHHHHHHH
Confidence 4567788999999999876 55432 2455 44444443
No 14
>2a1j_A DNA repair endonuclease XPF; XPF, xeroderma pigmentosum, DNA repair, endonuclease, helix-hairpin-helix, DNA binding protein; HET: DNA; 2.70A {Homo sapiens} SCOP: a.60.2.5 PDB: 2kn7_A*
Probab=21.37 E-value=45 Score=25.00 Aligned_cols=34 Identities=21% Similarity=0.327 Sum_probs=28.8
Q ss_pred hchHHHHHHHHHhCCcchhcCCCchhh-hhhhhhc
Q 012935 193 VGSAVAAKLMGTAGGLSALAKMPACNV-QLLGAKK 226 (453)
Q Consensus 193 vG~~iaArLi~~AGgL~~LAkmPAcnI-q~LGaeK 226 (453)
||+....+||.+-||+.++..++--.| .++|.+.
T Consensus 12 IG~kr~~~LL~~Fgs~~~i~~As~eeL~~vig~~~ 46 (63)
T 2a1j_A 12 VNAKNCRSLMHHVKNIAELAALSQDELTSILGNAA 46 (63)
T ss_dssp CCHHHHHHHHHHCSSHHHHHTCCHHHHHHHHSCHH
T ss_pred CCHHHHHHHHHHcCCHHHHHHCCHHHHHHHcCchH
Confidence 689999999999999999999988777 4566544
Done!