Your job contains 1 sequence.
>012936
MRRNLKDWILAPRYCVLGENISGFGSNGLLRLKNPCGSTEVLLFPRGCRWFSTQAAVEPS
TSDGLTVDGIVASQWTILDESEGDWKSHAAAIAQSIQVIKKRLQWKNLNVRLNLLSAELN
KPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEA
LLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYR
VTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAV
IPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQH
QNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNY
EVSDPDSVLEGDLDGFILSYLSASLDKDEGGQQ
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 012936
(453 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2010748 - symbol:AT1G56350 species:3702 "Arabi... 1666 2.1e-171 1
TIGR_CMR|SPO_2585 - symbol:SPO_2585 "peptide chain releas... 852 3.8e-85 1
TIGR_CMR|NSE_0604 - symbol:NSE_0604 "peptide chain releas... 780 1.6e-77 1
TIGR_CMR|ECH_0705 - symbol:ECH_0705 "peptide chain releas... 768 3.1e-76 1
TIGR_CMR|GSU_2278 - symbol:GSU_2278 "peptide chain releas... 765 6.3e-76 1
UNIPROTKB|P07012 - symbol:prfB species:83333 "Escherichia... 764 8.1e-76 1
TIGR_CMR|CHY_0163 - symbol:CHY_0163 "peptide chain releas... 733 1.6e-72 1
TIGR_CMR|APH_0479 - symbol:APH_0479 "peptide chain releas... 729 4.1e-72 1
UNIPROTKB|P66026 - symbol:prfB "Peptide chain release fac... 722 2.3e-71 1
UNIPROTKB|Q3Z8Y6 - symbol:prfB "Peptide chain release fac... 717 7.7e-71 1
TIGR_CMR|DET_0570 - symbol:DET_0570 "peptide chain releas... 717 7.7e-71 1
TIGR_CMR|CJE_1628 - symbol:CJE_1628 "peptide chain releas... 697 1.0e-68 1
DICTYBASE|DDB_G0288835 - symbol:prfB "class I peptide cha... 605 2.0e-61 2
TAIR|locus:2158936 - symbol:HCF109 "high chlorophyll fluo... 610 1.7e-59 1
TIGR_CMR|CBU_1965 - symbol:CBU_1965 "peptide chain releas... 478 1.6e-45 1
UNIPROTKB|Q9KQ25 - symbol:prfA "Peptide chain release fac... 472 7.1e-45 1
TIGR_CMR|VC_2179 - symbol:VC_2179 "peptide chain release ... 472 7.1e-45 1
TIGR_CMR|CHY_2563 - symbol:CHY_2563 "peptide chain releas... 466 3.1e-44 1
UNIPROTKB|P0A7I0 - symbol:prfA "peptide chain release fac... 464 5.0e-44 1
UNIPROTKB|P66016 - symbol:prfA "Peptide chain release fac... 462 8.1e-44 1
TIGR_CMR|CPS_3552 - symbol:CPS_3552 "peptide chain releas... 451 1.2e-42 1
TIGR_CMR|SO_3833 - symbol:SO_3833 "peptide chain release ... 449 1.9e-42 1
TIGR_CMR|SPO_2461 - symbol:SPO_2461 "peptide chain releas... 449 1.9e-42 1
TIGR_CMR|GSU_3104 - symbol:GSU_3104 "peptide chain releas... 433 9.6e-41 1
TAIR|locus:2041409 - symbol:AT2G47020 species:3702 "Arabi... 430 2.0e-40 1
DICTYBASE|DDB_G0283175 - symbol:prfA "peptide chain relea... 419 2.9e-39 1
MGI|MGI:1918830 - symbol:Mtrf1l "mitochondrial translatio... 413 1.3e-38 1
UNIPROTKB|F1MCM1 - symbol:MTRF1L "Peptide chain release f... 408 4.3e-38 1
UNIPROTKB|Q2KI15 - symbol:MTRF1L "Peptide chain release f... 408 4.3e-38 1
TIGR_CMR|APH_0420 - symbol:APH_0420 "peptide chain releas... 408 4.3e-38 1
TIGR_CMR|BA_5572 - symbol:BA_5572 "peptide chain release ... 407 5.5e-38 1
TIGR_CMR|NSE_0406 - symbol:NSE_0406 "peptide chain releas... 403 1.5e-37 1
UNIPROTKB|Q9UGC7 - symbol:MTRF1L "Peptide chain release f... 401 2.4e-37 1
UNIPROTKB|F1S7X5 - symbol:MTRF1L "Uncharacterized protein... 401 2.4e-37 1
RGD|1598312 - symbol:Mtrf1l "mitochondrial translational ... 396 8.0e-37 1
UNIPROTKB|F1NW58 - symbol:MTRF1L "Uncharacterized protein... 395 1.0e-36 1
TIGR_CMR|CJE_1784 - symbol:CJE_1784 "peptide chain releas... 391 2.7e-36 1
TIGR_CMR|DET_1210 - symbol:DET_1210 "peptide chain releas... 391 2.7e-36 1
UNIPROTKB|E2QTM1 - symbol:MTRF1L "Uncharacterized protein... 387 7.2e-36 1
TIGR_CMR|ECH_0597 - symbol:ECH_0597 "peptide chain releas... 384 1.5e-35 1
ZFIN|ZDB-GENE-030131-8198 - symbol:mtrf1l "mitochondrial ... 382 2.4e-35 1
FB|FBgn0032486 - symbol:CG5705 species:7227 "Drosophila m... 381 3.1e-35 1
GENEDB_PFALCIPARUM|MAL7P1.20 - symbol:MAL7P1.20 "peptide ... 235 2.3e-34 2
UNIPROTKB|Q8IC21 - symbol:MAL7P1.20 "Peptide chain releas... 235 2.3e-34 2
POMBASE|SPAC2F7.17 - symbol:SPAC2F7.17 "mitochondrial pep... 370 4.6e-34 1
UNIPROTKB|Q3MHI7 - symbol:MTRF1 "Peptide chain release fa... 360 5.2e-33 1
ASPGD|ASPL0000035902 - symbol:AN3462 species:162425 "Emer... 337 7.9e-33 2
TAIR|locus:2099137 - symbol:APG3 "AT3G62910" species:3702... 357 1.1e-32 1
CGD|CAL0003702 - symbol:orf19.1303 species:5476 "Candida ... 355 1.8e-32 1
MGI|MGI:2384815 - symbol:Mtrf1 "mitochondrial translation... 355 1.8e-32 1
UNIPROTKB|E2RAT2 - symbol:MTRF1 "Uncharacterized protein"... 349 7.7e-32 1
SGD|S000003111 - symbol:MRF1 "Mitochondrial translation r... 349 7.7e-32 1
UNIPROTKB|E1BXF8 - symbol:MTRF1 "Uncharacterized protein"... 347 1.3e-31 1
UNIPROTKB|O75570 - symbol:MTRF1 "Peptide chain release fa... 346 1.6e-31 1
UNIPROTKB|F1RJ87 - symbol:MTRF1 "Uncharacterized protein"... 345 2.0e-31 1
UNIPROTKB|B4DG01 - symbol:MTRF1 "Peptide chain release fa... 342 4.2e-31 1
UNIPROTKB|F6V8L3 - symbol:MTRF1L "Uncharacterized protein... 341 5.4e-31 1
ZFIN|ZDB-GENE-050220-8 - symbol:zgc:113104 "zgc:113104" s... 322 5.6e-29 1
UNIPROTKB|Q5TF45 - symbol:MTRF1L "Peptide chain release f... 278 5.0e-24 1
GENEDB_PFALCIPARUM|PF14_0265 - symbol:PF14_0265 "peptide ... 270 4.1e-23 1
UNIPROTKB|Q8ILH8 - symbol:PF14_0265 "Peptide chain releas... 270 4.1e-23 1
TAIR|locus:2082563 - symbol:PrfB3 "peptide chain release ... 278 1.4e-22 1
WB|WBGene00020993 - symbol:W03F8.3 species:6239 "Caenorha... 273 3.3e-22 1
UNIPROTKB|Q74EJ1 - symbol:GSU0971 "Hydrolase, putative" s... 171 3.5e-12 1
TIGR_CMR|GSU_0971 - symbol:GSU_0971 "peptidyl-tRNA hydrol... 171 3.5e-12 1
TAIR|locus:2006897 - symbol:AT1G33330 species:3702 "Arabi... 160 2.2e-09 1
UNIPROTKB|Q74FR0 - symbol:GSU0546 "Peptidyl-tRNA hydrolas... 138 1.3e-08 1
TIGR_CMR|GSU_0546 - symbol:GSU_0546 "peptidyl-tRNA hydrol... 138 1.3e-08 1
CGD|CAL0005347 - symbol:orf19.5488 species:5476 "Candida ... 129 1.3e-07 1
MGI|MGI:1919900 - symbol:2810006K23Rik "RIKEN cDNA 281000... 133 1.4e-07 1
UNIPROTKB|F1NSN8 - symbol:F1NSN8 "Uncharacterized protein... 126 2.7e-07 1
UNIPROTKB|F5H4X5 - symbol:C12orf65 "Probable peptide chai... 120 1.2e-06 1
UNIPROTKB|F1M2Z8 - symbol:RGD1563482 "Protein RGD1563482"... 128 1.5e-06 1
UNIPROTKB|Q9H3J6 - symbol:C12orf65 "Probable peptide chai... 120 3.6e-06 1
UNIPROTKB|F1RFL3 - symbol:C12orf65 "Uncharacterized prote... 116 4.5e-06 2
FB|FBgn0050100 - symbol:CG30100 species:7227 "Drosophila ... 111 1.1e-05 1
UNIPROTKB|F1MLX1 - symbol:C17H12orf65 "Uncharacterized pr... 120 1.2e-05 1
UNIPROTKB|E2QXR1 - symbol:C12orf65 "Uncharacterized prote... 121 6.8e-05 1
POMBASE|SPBC1105.18c - symbol:SPBC1105.18c "peptide relea... 107 0.00048 1
>TAIR|locus:2010748 [details] [associations]
symbol:AT1G56350 species:3702 "Arabidopsis thaliana"
[GO:0003747 "translation release factor activity" evidence=IEA;ISS]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006415 "translational
termination" evidence=IEA;ISS] [GO:0009507 "chloroplast"
evidence=ISM] [GO:0016149 "translation release factor activity,
codon specific" evidence=IEA] [GO:0009640 "photomorphogenesis"
evidence=RCA] [GO:0009793 "embryo development ending in seed
dormancy" evidence=RCA] [GO:0009845 "seed germination"
evidence=RCA] [GO:0009909 "regulation of flower development"
evidence=RCA] [GO:0009933 "meristem structural organization"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
[GO:0010182 "sugar mediated signaling pathway" evidence=RCA]
[GO:0010228 "vegetative to reproductive phase transition of
meristem" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0019915 "lipid storage" evidence=RCA] [GO:0048825
"cotyledon development" evidence=RCA] [GO:0050826 "response to
freezing" evidence=RCA] [GO:0051301 "cell division" evidence=RCA]
InterPro:IPR000352 InterPro:IPR004374 InterPro:IPR005139
Pfam:PF00472 Pfam:PF03462 SMART:SM00937 InterPro:IPR014720
EMBL:CP002684 GO:GO:0005737 Gene3D:3.30.160.20 GO:GO:0016149
KO:K02836 PANTHER:PTHR11075:SF6 TIGRFAMs:TIGR00020 OMA:SAVRITY
IPI:IPI00540527 RefSeq:NP_176032.2 UniGene:At.42791
ProteinModelPortal:F4I532 SMR:F4I532 PRIDE:F4I532
EnsemblPlants:AT1G56350.1 GeneID:842089 KEGG:ath:AT1G56350
Uniprot:F4I532
Length = 482
Score = 1666 (591.5 bits), Expect = 2.1e-171, P = 2.1e-171
Identities = 320/406 (78%), Positives = 357/406 (87%)
Query: 44 FPRGCRWFSTQAAVEPSTSDGLTVDGIVASQWTILDESEGDWKSHAAAIAQSIQVIKKRL 103
F R S++A +T DGLTV+ I+A+QW ILDE+EGDWKSHAAAIAQSIQVIK+RL
Sbjct: 74 FASSTRSLSSEAVAVAATCDGLTVERIIANQWPILDENEGDWKSHAAAIAQSIQVIKRRL 133
Query: 104 QWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIK 163
QWK L VRL +LSAELNK +LWDDP HAG+ISREHGSL GKMK V FE+ELLEHIDM+K
Sbjct: 134 QWKKLLVRLKVLSAELNKSDLWDDPTHAGKISREHGSLTGKMKGVMTFERELLEHIDMLK 193
Query: 164 LAREENDTXXXXXXXXXXXTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWA 223
LA+EEND+ MRR SKEKEL+ALLS + DPCSCYIEVQAGAGGTES DWA
Sbjct: 194 LAKEENDSELESETLKALIDMRRVSKEKELEALLSADNDPCSCYIEVQAGAGGTESNDWA 253
Query: 224 SMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRIS 283
+MV++MYK+WAQRR + VT++DE PGEIAGIKRATIKV+GEYA+GYAKAEVGVHRLVRIS
Sbjct: 254 AMVMEMYKTWAQRRKFSVTVVDEAPGEIAGIKRATIKVNGEYAYGYAKAEVGVHRLVRIS 313
Query: 284 PFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRII 343
PFDSGKRRHTSFAAVAVIP GD ST V+IN+SDLRIERFRSGGAGGQHANTTDSAVRI+
Sbjct: 314 PFDSGKRRHTSFAAVAVIPILGDGSTRVEINDSDLRIERFRSGGAGGQHANTTDSAVRIV 373
Query: 344 HIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIR 403
HIPTGITATCQNERSQH NKASAM VLQSR++QLE+ARQ MNA+HTQSLT+ISWGNQIR
Sbjct: 374 HIPTGITATCQNERSQHSNKASAMAVLQSRLDQLEMARQTAMNAQHTQSLTEISWGNQIR 433
Query: 404 TYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASLDKDE 449
TYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILS+LS+SLDKD+
Sbjct: 434 TYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSFLSSSLDKDD 479
>TIGR_CMR|SPO_2585 [details] [associations]
symbol:SPO_2585 "peptide chain release factor 2"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0003747 "translation
release factor activity" evidence=ISS] [GO:0006415 "translational
termination" evidence=ISS] HAMAP:MF_00094 InterPro:IPR000352
InterPro:IPR004374 InterPro:IPR005139 InterPro:IPR020853
Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745 SMART:SM00937
InterPro:IPR014720 GO:GO:0005737 EMBL:CP000031
GenomeReviews:CP000031_GR Gene3D:3.30.160.20 GO:GO:0016149
HOGENOM:HOG000074814 KO:K02836 OMA:KAWDMLR ProtClustDB:PRK00578
PANTHER:PTHR11075:SF6 TIGRFAMs:TIGR00020 RefSeq:YP_167798.1
ProteinModelPortal:Q5LQA8 SMR:Q5LQA8 GeneID:3194310
KEGG:sil:SPO2585 PATRIC:23378573 Uniprot:Q5LQA8
Length = 375
Score = 852 (305.0 bits), Expect = 3.8e-85, P = 3.8e-85
Identities = 167/352 (47%), Positives = 239/352 (67%)
Query: 92 IAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAF 151
I +S++++ +R+ + RL +A + PNLWD+P +A ++ RE +L+ + K
Sbjct: 12 IQKSLRLLAQRMDQETAQHRLEEFNARVEDPNLWDNPENAQKLMRERQTLVDALDIYKGI 71
Query: 152 EQELLEHIDMIKLAREENDTXXXXXXXXXXXTMRRKSKEKELDALLSGELDPCSCYIEVQ 211
E +L ++I++I+L E+D +R ++ EKEL+ALL GE D ++E+
Sbjct: 72 ETDLADNIELIELGEMEDDQDVIKDAEAALKALRERAAEKELEALLDGEADGNDTFLEIN 131
Query: 212 AGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAK 271
AGAGGTES DWASM+ +MY WA+++GY+V L E G+ AGIK A K+ G A+G+ K
Sbjct: 132 AGAGGTESCDWASMLARMYVRWAEKKGYKVELQSESAGDEAGIKSAAYKISGHNAYGWLK 191
Query: 272 AEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQ 331
+E GVHRLVRISP+D+ +RHTSF++V V P D + +++N SD+RI+ +RS GAGGQ
Sbjct: 192 SESGVHRLVRISPYDAAAKRHTSFSSVWVYPVV-DDNIEIEVNPSDIRIDTYRSSGAGGQ 250
Query: 332 HANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQ-AQMNAEHT 390
H NTTDSAVRI HIPTGI T +E+SQHQN+ AM L+SR+ Q E+ R+ A++NA H
Sbjct: 251 HVNTTDSAVRITHIPTGIVVT-SSEKSQHQNRDIAMKALKSRLYQQELDRRNAEINAAH- 308
Query: 391 QSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLS 442
++ D WGNQIR+YVL PY+MVKDLRT +E SD VL+G LDGF+ + L+
Sbjct: 309 EAKGDAGWGNQIRSYVLQPYQMVKDLRTGHETSDTKGVLDGALDGFMAATLA 360
>TIGR_CMR|NSE_0604 [details] [associations]
symbol:NSE_0604 "peptide chain release factor 2,
programmed frameshift" species:222891 "Neorickettsia sennetsu str.
Miyayama" [GO:0003747 "translation release factor activity"
evidence=ISS] [GO:0006415 "translational termination" evidence=ISS]
HAMAP:MF_00094 InterPro:IPR000352 InterPro:IPR004374
InterPro:IPR005139 InterPro:IPR020853 Pfam:PF00472 Pfam:PF03462
PROSITE:PS00745 SMART:SM00937 InterPro:IPR014720 GO:GO:0005737
Gene3D:3.30.160.20 eggNOG:COG1186 EMBL:CP000237
GenomeReviews:CP000237_GR GO:GO:0016149 HOGENOM:HOG000074814
KO:K02836 PANTHER:PTHR11075:SF6 TIGRFAMs:TIGR00020
RefSeq:YP_506484.1 ProteinModelPortal:Q2GDG2 STRING:Q2GDG2
GeneID:3931929 KEGG:nse:NSE_0604 PATRIC:22681243 OMA:SAVRITY
ProtClustDB:CLSK2527643 Uniprot:Q2GDG2
Length = 365
Score = 780 (279.6 bits), Expect = 1.6e-77, P = 1.6e-77
Identities = 153/354 (43%), Positives = 239/354 (67%)
Query: 92 IAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAF 151
+ +S++VI+++L + + RL + A ++ P LW+D A + +E + +KE K
Sbjct: 12 LKKSVEVIRRQLDIEKKHSRLEEIQALVDSPTLWEDQSRAQLLLKEKSQIETSLKEFKEL 71
Query: 152 EQELLEHIDMIKLAREENDTXXXXXXXXXXXTMRRKSKEKELDALLSGELDPCSCYIEVQ 211
+L + I+MI+LA ++++ ++ K ++KE++ L SGE D C +E+Q
Sbjct: 72 SIQLDDLIEMIELASKDHEEETMKDLERELLLLKEKIQKKEIECLFSGEADGNDCLLEIQ 131
Query: 212 AGAGGTESMDWASMVLQMYKSWAQ-RRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYA 270
+GAGGTES DWA M+L+MY WA+ ++V ++D++ GE GIK T+KV G+ A+G+A
Sbjct: 132 SGAGGTESNDWAMMLLRMYTRWAEIYHKFQVQIVDKVEGEETGIKSCTLKVMGKNAYGWA 191
Query: 271 KAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGG 330
+ E GVHRLVRISPFD+ +RHTSFA + V P + ++ I+E DL+I+ +R+ GAGG
Sbjct: 192 RTETGVHRLVRISPFDANAKRHTSFAKIFVSPCI-EGEINISIDEKDLKIDTYRASGAGG 250
Query: 331 QHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQ-MNAEH 389
QH N T+SA+RI H+P+ I Q+ RSQHQNKA AM +L+SR+ ++E+ ++ + +NA
Sbjct: 251 QHVNKTESAIRITHLPSKIVVQSQSSRSQHQNKAEAMQMLKSRLYEIELRKKEEKLNA-- 308
Query: 390 TQSLTD-ISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLS 442
+++ D I WG QIR+YVLHPY+M+KDLRT +EV + SVL+GDLD FI++ +S
Sbjct: 309 ARNVEDSIGWGYQIRSYVLHPYQMIKDLRTGHEVGNITSVLDGDLDSFIIATIS 362
>TIGR_CMR|ECH_0705 [details] [associations]
symbol:ECH_0705 "peptide chain release factor 2,
programmed frameshift" species:205920 "Ehrlichia chaffeensis str.
Arkansas" [GO:0003747 "translation release factor activity"
evidence=ISS] [GO:0006415 "translational termination" evidence=ISS]
InterPro:IPR000352 InterPro:IPR004374 InterPro:IPR005139
Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745 SMART:SM00937
InterPro:IPR014720 GO:GO:0005737 EMBL:CP000236
GenomeReviews:CP000236_GR Gene3D:3.30.160.20 eggNOG:COG1186
GO:GO:0016149 HOGENOM:HOG000074814 KO:K02836 OMA:KAWDMLR
PANTHER:PTHR11075:SF6 TIGRFAMs:TIGR00020 RefSeq:YP_507510.1
ProteinModelPortal:Q2GGC3 STRING:Q2GGC3 GeneID:3927613
KEGG:ech:ECH_0705 PATRIC:20576858 ProtClustDB:CLSK748740
Uniprot:Q2GGC3
Length = 366
Score = 768 (275.4 bits), Expect = 3.1e-76, P = 3.1e-76
Identities = 150/356 (42%), Positives = 229/356 (64%)
Query: 91 AIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKA 150
++ +++Q+I+ L NL L LS + + +LWDD A RI E + +
Sbjct: 13 SLGKALQLIRGHLDIDNLTSLLADLSLQCSSTSLWDDNSLAQRILCERARISKTLNSFTE 72
Query: 151 FEQELLEHIDMIKLAREENDTXXXXXXXXXXXTMRRKSKEKELDALLSGELDPCSCYIEV 210
E+E + +++ + + D ++ K ++KE++ L S E D C+IE+
Sbjct: 73 LEEEYNYYTELLSVINNDTDELLNELEAGLAK-LKEKVQKKEVECLFSNEADHNDCFIEI 131
Query: 211 QAGAGGTESMDWASMVLQMYKSWAQ-RRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGY 269
Q+GAGGTES DW+SM+ +MY WA+ ++ ++ ++ GE G+K ATIKV G+ A+G+
Sbjct: 132 QSGAGGTESNDWSSMLFRMYVRWAEIYHNFKTEIVHKLDGEEVGVKSATIKVIGDNAYGW 191
Query: 270 AKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAG 329
AK E G+HRLVRISPF+S +RHT+F+++ V P + T+++I + DLRI+ +R+ GAG
Sbjct: 192 AKTESGIHRLVRISPFNSNAKRHTTFSSILVSPVINED-TNIEILDKDLRIDTYRASGAG 250
Query: 330 GQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEH 389
GQH N T+SAVRI HIP+GI CQN RSQHQN A A +L+SR+ QL++ + + AE
Sbjct: 251 GQHVNKTESAVRITHIPSGIVVQCQNNRSQHQNLAEAHNLLKSRLYQLKLQEKEKKMAEE 310
Query: 390 TQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
+I WGNQIR+YV+HPY+MVKD+RT +EV + +SVL+G+LD FI+S L+ +
Sbjct: 311 HNKRCNIGWGNQIRSYVMHPYQMVKDIRTGHEVGNVNSVLDGNLDSFIISALTTKI 366
>TIGR_CMR|GSU_2278 [details] [associations]
symbol:GSU_2278 "peptide chain release factor 2,
programmed frameshift" species:243231 "Geobacter sulfurreducens
PCA" [GO:0003747 "translation release factor activity"
evidence=ISS] [GO:0006415 "translational termination" evidence=ISS]
HAMAP:MF_00094 InterPro:IPR000352 InterPro:IPR004374
InterPro:IPR005139 InterPro:IPR020853 Pfam:PF00472 Pfam:PF03462
PROSITE:PS00745 SMART:SM00937 InterPro:IPR014720 GO:GO:0005737
Gene3D:3.30.160.20 EMBL:AE017180 GenomeReviews:AE017180_GR
GO:GO:0016149 HOGENOM:HOG000074814 KO:K02836 PANTHER:PTHR11075:SF6
TIGRFAMs:TIGR00020 OMA:MGWGSQI RefSeq:NP_953327.1
ProteinModelPortal:Q74AS3 SMR:Q74AS3 GeneID:2686956
KEGG:gsu:GSU2278 PATRIC:22027411 ProtClustDB:CLSK828793
Uniprot:Q74AS3
Length = 372
Score = 765 (274.4 bits), Expect = 6.3e-76, P = 6.3e-76
Identities = 147/327 (44%), Positives = 210/327 (64%)
Query: 115 LSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTXXX 174
L A++ P WD+ A ++ RE + + ++ + +I+L E D
Sbjct: 35 LEAQIAAPGFWDNNEEAQKVLRERTRIEKLIDLWDRLNRQADDIRVLIELGEEAQDEATL 94
Query: 175 XXXXXXXXTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWA 234
++ R+ + E +LSG D SC++ + AGAGGTE+ DWA M+L+MY +
Sbjct: 95 DEVRALNDSLEREVEGAEFQRMLSGPHDKNSCFVSINAGAGGTEAQDWAEMLLRMYLRYC 154
Query: 235 QRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTS 294
+R+G++ + D G+ AG+K AT VDGEYA+GY KAE G+HRLVRISPFDS RRHTS
Sbjct: 155 ERKGWKTEITDFQAGDEAGVKSATFTVDGEYAYGYLKAEAGIHRLVRISPFDSNARRHTS 214
Query: 295 FAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQ 354
FA+V V P D ++I ESDLR++ +RS GAGGQH NTTDSAVR+ H+PTGI CQ
Sbjct: 215 FASVFVFPEIEDD-IEIKIAESDLRVDTYRSSGAGGQHVNTTDSAVRLTHLPTGIVVACQ 273
Query: 355 NERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVK 414
ERSQH NKA+A+ +L++++ + E+ + +E DI WG+QIR+YVLHPY+MVK
Sbjct: 274 CERSQHLNKATALRMLRAKLYEKELQEREVQASELAGEKKDIGWGSQIRSYVLHPYKMVK 333
Query: 415 DLRTNYEVSDPDSVLEGDLDGFILSYL 441
DLRT E +PD+VL+G L+ F++++L
Sbjct: 334 DLRTGVESGNPDAVLDGALEDFVVAFL 360
>UNIPROTKB|P07012 [details] [associations]
symbol:prfB species:83333 "Escherichia coli K-12"
[GO:0015858 "nucleoside transport" evidence=IMP] [GO:0015864
"pyrimidine nucleoside transport" evidence=IMP] [GO:0015862
"uridine transport" evidence=IMP] [GO:0006412 "translation"
evidence=IEA] [GO:0016149 "translation release factor activity,
codon specific" evidence=IEA;IDA] [GO:0006415 "translational
termination" evidence=IEA;IDA] [GO:0005737 "cytoplasm"
evidence=IEA] HAMAP:MF_00094 InterPro:IPR000352 InterPro:IPR004374
InterPro:IPR005139 InterPro:IPR020853 Pfam:PF00472 Pfam:PF03462
PROSITE:PS00745 SMART:SM00937 InterPro:IPR014720 GO:GO:0005737
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR Gene3D:3.30.160.20 EMBL:U28375
eggNOG:COG1186 GO:GO:0016149 HOGENOM:HOG000074814 KO:K02836
OMA:KAWDMLR ProtClustDB:PRK00578 PANTHER:PTHR11075:SF6
TIGRFAMs:TIGR00020 EMBL:M11520 EMBL:J03795 PIR:C65073
RefSeq:NP_417367.1 RefSeq:YP_491092.1 PDB:1GQE PDB:1MI6 PDB:1ML5
PDBsum:1GQE PDBsum:1MI6 PDBsum:1ML5 ProteinModelPortal:P07012
SMR:P07012 DIP:DIP-10559N IntAct:P07012 MINT:MINT-1238444
PaxDb:P07012 PRIDE:P07012 EnsemblBacteria:EBESCT00000002308
EnsemblBacteria:EBESCT00000016130 GeneID:12930712 GeneID:947369
KEGG:ecj:Y75_p2823 KEGG:eco:b2891 PATRIC:32121192 EchoBASE:EB0755
EcoGene:EG10762 BioCyc:EcoCyc:EG10762-MONOMER
BioCyc:ECOL316407:JW5847-MONOMER EvolutionaryTrace:P07012
Genevestigator:P07012 GO:GO:0015862 Uniprot:P07012
Length = 365
Score = 764 (274.0 bits), Expect = 8.1e-76, P = 8.1e-76
Identities = 149/354 (42%), Positives = 222/354 (62%)
Query: 92 IAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAF 151
+ + V++ L + RL ++AEL +P++W++P A + +E SL + +
Sbjct: 14 LTERSDVLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAVVDTLDQM 73
Query: 152 EQELLEHIDMIKLAREENDTXXXXXXXXXXXTMRRKSKEKELDALLSGELDPCSCYIEVQ 211
+Q L + +++LA E +D + K + E + SGE D CY+++Q
Sbjct: 74 KQGLEDVSGLLELAVEADDEETFNEAVAELDALEEKLAQLEFRRMFSGEYDSADCYLDIQ 133
Query: 212 AGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAK 271
AG+GGTE+ DWASM+ +MY WA+ RG++ +++E GE+AGIK TIK+ G+YA+G+ +
Sbjct: 134 AGSGGTEAQDWASMLERMYLRWAESRGFKTEIIEESEGEVAGIKSVTIKISGDYAYGWLR 193
Query: 272 AEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQ 331
E GVHRLVR SPFDSG RRHTSF++ V P D ++IN +DLRI+ +R+ GAGGQ
Sbjct: 194 TETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEV-DDDIDIEINPADLRIDVYRTSGAGGQ 252
Query: 332 HANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQ 391
H N T+SAVRI HIPTGI CQN+RSQH+NK AM +++++ +LE+ ++
Sbjct: 253 HVNRTESAVRITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMED 312
Query: 392 SLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
+ +DI WG+QIR+YVL R +KDLRT E + +VL+G LD FI + L A L
Sbjct: 313 NKSDIGWGSQIRSYVLDDSR-IKDLRTGVETRNTQAVLDGSLDQFIEASLKAGL 365
>TIGR_CMR|CHY_0163 [details] [associations]
symbol:CHY_0163 "peptide chain release factor 2,
programmed frameshift" species:246194 "Carboxydothermus
hydrogenoformans Z-2901" [GO:0003747 "translation release factor
activity" evidence=ISS] [GO:0006415 "translational termination"
evidence=ISS] HAMAP:MF_00094 InterPro:IPR000352 InterPro:IPR004374
InterPro:IPR005139 InterPro:IPR020853 Pfam:PF00472 Pfam:PF03462
PROSITE:PS00745 SMART:SM00937 InterPro:IPR014720 GO:GO:0005737
EMBL:CP000141 GenomeReviews:CP000141_GR Gene3D:3.30.160.20
eggNOG:COG1186 GO:GO:0016149 HOGENOM:HOG000074814 KO:K02836
PANTHER:PTHR11075:SF6 TIGRFAMs:TIGR00020 OMA:MGWGSQI
RefSeq:YP_359035.1 ProteinModelPortal:Q3AFP9 STRING:Q3AFP9
GeneID:3727359 KEGG:chy:CHY_0163 PATRIC:21273511 Uniprot:Q3AFP9
Length = 371
Score = 733 (263.1 bits), Expect = 1.6e-72, P = 1.6e-72
Identities = 150/368 (40%), Positives = 220/368 (59%)
Query: 86 KSHAAAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKM 145
K A I+ I+ ++ L + L+A+ +P+ WD+ A + +E L +
Sbjct: 6 KRSLAEISPKIEEMRVSLDIPGKKELVEKLTAKTYEPDFWDNYTEAQKTLKELNRLKDDI 65
Query: 146 KEVKAFEQELLEHIDMIKLAREENDTXXXXXXXXXXXTMRRKSKEKELDALLSGELDPCS 205
++ + + E +++L EE + + K E++ LLSG D S
Sbjct: 66 EKYEELLKAQEELTVLLQLLEEEENEELAVEAQDKAKKLMEKLHRMEIELLLSGPYDKNS 125
Query: 206 CYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEY 265
+ + AGAGGTE+ DW M+ +MY WA+ +GY+V L+D + GE AG+K T V+G
Sbjct: 126 AIVSLHAGAGGTEAQDWVEMLYRMYTRWAEDKGYKVELIDRLLGEEAGLKSVTFSVEGFG 185
Query: 266 AFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRS 325
A+GY KAE GVHRL+RISPFD RRHTSFA+V V+P + +++ E +L+IE FRS
Sbjct: 186 AYGYLKAERGVHRLIRISPFDFSGRRHTSFASVDVLPEVAEDIPEIELKEEELKIETFRS 245
Query: 326 GGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQM 385
GGAGGQH N T+SAVRI H+PTGIT CQNERSQ N+A A +L++++ LE+ ++ +
Sbjct: 246 GGAGGQHVNKTESAVRITHLPTGITVVCQNERSQLMNRALAEKLLKAKLLDLEMKKKEEE 305
Query: 386 NAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
A+ +I+WG+QIRTYV HPY +VKD RT EV D V++G++D FI +YL +
Sbjct: 306 MAKLRGEQKEIAWGSQIRTYVFHPYSLVKDHRTGVEVGDVQGVMDGEIDIFIEAYLKMLV 365
Query: 446 DKDEGGQQ 453
+GG Q
Sbjct: 366 T--QGGNQ 371
>TIGR_CMR|APH_0479 [details] [associations]
symbol:APH_0479 "peptide chain release factor 2,
programmed frameshift" species:212042 "Anaplasma phagocytophilum
HZ" [GO:0003747 "translation release factor activity" evidence=ISS]
[GO:0006415 "translational termination" evidence=ISS]
InterPro:IPR000352 InterPro:IPR004374 InterPro:IPR005139
Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745 SMART:SM00937
InterPro:IPR014720 GO:GO:0005737 Gene3D:3.30.160.20 EMBL:CP000235
GenomeReviews:CP000235_GR eggNOG:COG1186 GO:GO:0016149
HOGENOM:HOG000074814 KO:K02836 OMA:KAWDMLR PANTHER:PTHR11075:SF6
TIGRFAMs:TIGR00020 RefSeq:YP_505078.1 ProteinModelPortal:Q2GKM3
STRING:Q2GKM3 GeneID:3930254 KEGG:aph:APH_0479 PATRIC:20949594
ProtClustDB:CLSK747346 Uniprot:Q2GKM3
Length = 376
Score = 729 (261.7 bits), Expect = 4.1e-72, P = 4.1e-72
Identities = 144/358 (40%), Positives = 217/358 (60%)
Query: 92 IAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAF 151
I + + I + L L L L E + P+LWDD A + E + + +
Sbjct: 14 IGEDLASIARCLDIVGLESTLESLDLECSSPSLWDDAEKAKSLLSERSRVSAVLTSFRVL 73
Query: 152 EQELLEHIDMIKLAREENDTXXXXXXXXXXXTMRRKSKEKELDALLSGELDPCSCYIEVQ 211
E+E + ++ ++ + +D +++ + +K+ + + S E D SC++ ++
Sbjct: 74 EKEHKDLAELAEMISDSDDRDFLATINAELQSLKLRISQKKTECMFSHEADANSCFLTIR 133
Query: 212 AGAGGTESMDWASMVLQMYKSWAQR-RGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYA 270
+GAGGTES DW M+L+MY WA+ + V +D + GE G+K T+K+ G A+G+A
Sbjct: 134 SGAGGTESSDWVCMLLRMYTKWAESFHEFTVETVDSVDGEETGLKAVTVKICGIGAYGWA 193
Query: 271 KAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGG 330
+ E G+HRLVRISPFD +RHTSFA+V V P D ++I E DLRI+ +R+ GAGG
Sbjct: 194 RTESGIHRLVRISPFDHAAKRHTSFASVEVSPVV-DHEIDIKILEKDLRIDTYRASGAGG 252
Query: 331 QHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHT 390
QH N T+SAVRI HIP+G+ CQ RSQHQN+A A +L+SR+ ++E+ + + A+
Sbjct: 253 QHVNKTESAVRITHIPSGMVVQCQTSRSQHQNRAEAYSLLKSRLYEMELQEKEKRMAQDH 312
Query: 391 QSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLS-ASLDK 447
Q+ +I WG+QIR+YV+HPYRMVKDLRT +E + D+V+ GDLD FI + L SL K
Sbjct: 313 QNKCEIGWGHQIRSYVMHPYRMVKDLRTGHETGNVDAVMNGDLDAFITAALMRGSLAK 370
>UNIPROTKB|P66026 [details] [associations]
symbol:prfB "Peptide chain release factor 2" species:1773
"Mycobacterium tuberculosis" [GO:0005618 "cell wall" evidence=IDA]
[GO:0040007 "growth" evidence=IMP] HAMAP:MF_00094
InterPro:IPR000352 InterPro:IPR004374 InterPro:IPR005139
InterPro:IPR020853 Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745
SMART:SM00937 InterPro:IPR014720 GO:GO:0005737 GO:GO:0040007
GO:GO:0005618 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR Gene3D:3.30.160.20 EMBL:BX842582
eggNOG:COG1186 GO:GO:0016149 HOGENOM:HOG000074814 KO:K02836
OMA:KAWDMLR ProtClustDB:PRK00578 PANTHER:PTHR11075:SF6
TIGRFAMs:TIGR00020 PIR:H70919 RefSeq:NP_217621.1 RefSeq:NP_337713.1
RefSeq:YP_006516568.1 ProteinModelPortal:P66026 SMR:P66026
EnsemblBacteria:EBMYCT00000000199 EnsemblBacteria:EBMYCT00000071451
GeneID:13317912 GeneID:888820 GeneID:926714 KEGG:mtc:MT3188
KEGG:mtu:Rv3105c KEGG:mtv:RVBD_3105c PATRIC:18128778
TubercuList:Rv3105c Uniprot:P66026
Length = 371
Score = 722 (259.2 bits), Expect = 2.3e-71, P = 2.3e-71
Identities = 149/358 (41%), Positives = 220/358 (61%)
Query: 84 DWKSHAAAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMG 143
D ++ AA+ ++ +++ L + L R+ L E + P+LWDD A R++ E G
Sbjct: 4 DRQADIAALDCTLTTVERVLDVEGLRSRIEKLEHEASDPHLWDDQTRAQRVTSELSHTQG 63
Query: 144 KMKEVKAFEQELLEHIDMIKLAREENDTXXXXXXXXXXX---TMRRKSKEKELDALLSGE 200
+++ V+ + L + + +LA EE ++R + E+ LLSGE
Sbjct: 64 ELRRVEELRRRLDDLPVLYELAAEEAGAAAADAVAEADAELKSLRADIEATEVRTLLSGE 123
Query: 201 LDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIK 260
D + +++GAGG ++ DWA M+++MY WA++ Y V + D E AGIK AT
Sbjct: 124 YDEREALVTIRSGAGGVDAADWAEMLMRMYIRWAEQHKYPVEVFDTSYAEEAGIKSATFA 183
Query: 261 VDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRI 320
V +A+G E G HRLVRISPFD+ RR TSFA V V+P +++ H+ I E D+R+
Sbjct: 184 VHAPFAYGTLSVEQGTHRLVRISPFDNQSRRQTSFAEVEVLPVV-ETTDHIDIPEGDVRV 242
Query: 321 ERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRV-NQLEI 379
+ +RS G GGQ NTTDSAVR+ HIP+GI TCQNE+SQ QNK +AM VLQ+++ + +
Sbjct: 243 DVYRSSGPGGQSVNTTDSAVRLTHIPSGIVVTCQNEKSQLQNKIAAMRVLQAKLLERKRL 302
Query: 380 ARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFI 437
+A+++A + SWGNQ+R+YVLHPY+MVKDLRT YEV +P +VL+GDLDGF+
Sbjct: 303 EERAELDALKADGGS--SWGNQMRSYVLHPYQMVKDLRTEYEVGNPAAVLDGDLDGFL 358
>UNIPROTKB|Q3Z8Y6 [details] [associations]
symbol:prfB "Peptide chain release factor 2" species:243164
"Dehalococcoides ethenogenes 195" [GO:0003747 "translation release
factor activity" evidence=ISS] [GO:0006415 "translational
termination" evidence=ISS] HAMAP:MF_00094 InterPro:IPR000352
InterPro:IPR004374 InterPro:IPR005139 InterPro:IPR020853
Pfam:PF00472 Pfam:PF03462 SMART:SM00937 InterPro:IPR014720
GO:GO:0005737 Gene3D:3.30.160.20 EMBL:CP000027
GenomeReviews:CP000027_GR eggNOG:COG1186 GO:GO:0003747
GO:GO:0016149 HOGENOM:HOG000074814 KO:K02836 PANTHER:PTHR11075:SF6
TIGRFAMs:TIGR00020 OMA:MGWGSQI RefSeq:YP_181313.1
ProteinModelPortal:Q3Z8Y6 STRING:Q3Z8Y6 GeneID:3230122
KEGG:det:DET0570 PATRIC:21608209 ProtClustDB:CLSK837416
Uniprot:Q3Z8Y6
Length = 362
Score = 717 (257.5 bits), Expect = 7.7e-71, P = 7.7e-71
Identities = 144/345 (41%), Positives = 218/345 (63%)
Query: 106 KNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEV-KAFEQELLEHIDMIKL 164
K L + L SA + P+ W D +A + ++ + ++ EV + EQ + + +++ L
Sbjct: 24 KELEIT-ELESASAS-PDFWQDQQNAQKAMKKLAANK-RVSEVWRGLEQRVNDLLELFAL 80
Query: 165 AREENDTXXXXXXXXXXXTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWAS 224
E D T+ + E+ SG+ D + + V AGAGG ES DWA
Sbjct: 81 THE--DPSLGNEIEREVNTLTAEIDTLEVGLAFSGQYDSRNALLTVHAGAGGVESQDWAG 138
Query: 225 MVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISP 284
M+L+M+ WA+++G+ + ++D+ PGE AGIK AT++++GEYA+G+ K+E GVHRL+R+SP
Sbjct: 139 MLLRMFMRWAEKKGFGMEVLDQSPGEEAGIKSATLQIEGEYAYGFLKSEHGVHRLIRLSP 198
Query: 285 FDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIH 344
FD+ RHTSFA V V+P + DS + I D++I+ FRS G GGQ+ +AVR+ H
Sbjct: 199 FDADHARHTSFALVEVMPEAEDS-VDIDIKPEDIKIDMFRSSGPGGQNVQKVSTAVRVTH 257
Query: 345 IPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRT 404
IP+GI Q ERSQHQN+ AM +L S++ +EIA++A+ A+ WGNQIR+
Sbjct: 258 IPSGIVVASQTERSQHQNREIAMRILASKLLAVEIAKRAEERAKIKGERISAEWGNQIRS 317
Query: 405 YVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASLDKDE 449
YVLHPY+MVKD RT+YEV + ++VLEG+LDGFI +YL ++ ++E
Sbjct: 318 YVLHPYKMVKDHRTDYEVGNAEAVLEGELDGFINAYLRQNIGREE 362
>TIGR_CMR|DET_0570 [details] [associations]
symbol:DET_0570 "peptide chain release factor 2,
programmed frameshift" species:243164 "Dehalococcoides ethenogenes
195" [GO:0003747 "translation release factor activity"
evidence=ISS] [GO:0006415 "translational termination" evidence=ISS]
HAMAP:MF_00094 InterPro:IPR000352 InterPro:IPR004374
InterPro:IPR005139 InterPro:IPR020853 Pfam:PF00472 Pfam:PF03462
SMART:SM00937 InterPro:IPR014720 GO:GO:0005737 Gene3D:3.30.160.20
EMBL:CP000027 GenomeReviews:CP000027_GR eggNOG:COG1186
GO:GO:0003747 GO:GO:0016149 HOGENOM:HOG000074814 KO:K02836
PANTHER:PTHR11075:SF6 TIGRFAMs:TIGR00020 OMA:MGWGSQI
RefSeq:YP_181313.1 ProteinModelPortal:Q3Z8Y6 STRING:Q3Z8Y6
GeneID:3230122 KEGG:det:DET0570 PATRIC:21608209
ProtClustDB:CLSK837416 Uniprot:Q3Z8Y6
Length = 362
Score = 717 (257.5 bits), Expect = 7.7e-71, P = 7.7e-71
Identities = 144/345 (41%), Positives = 218/345 (63%)
Query: 106 KNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEV-KAFEQELLEHIDMIKL 164
K L + L SA + P+ W D +A + ++ + ++ EV + EQ + + +++ L
Sbjct: 24 KELEIT-ELESASAS-PDFWQDQQNAQKAMKKLAANK-RVSEVWRGLEQRVNDLLELFAL 80
Query: 165 AREENDTXXXXXXXXXXXTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWAS 224
E D T+ + E+ SG+ D + + V AGAGG ES DWA
Sbjct: 81 THE--DPSLGNEIEREVNTLTAEIDTLEVGLAFSGQYDSRNALLTVHAGAGGVESQDWAG 138
Query: 225 MVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISP 284
M+L+M+ WA+++G+ + ++D+ PGE AGIK AT++++GEYA+G+ K+E GVHRL+R+SP
Sbjct: 139 MLLRMFMRWAEKKGFGMEVLDQSPGEEAGIKSATLQIEGEYAYGFLKSEHGVHRLIRLSP 198
Query: 285 FDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIH 344
FD+ RHTSFA V V+P + DS + I D++I+ FRS G GGQ+ +AVR+ H
Sbjct: 199 FDADHARHTSFALVEVMPEAEDS-VDIDIKPEDIKIDMFRSSGPGGQNVQKVSTAVRVTH 257
Query: 345 IPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRT 404
IP+GI Q ERSQHQN+ AM +L S++ +EIA++A+ A+ WGNQIR+
Sbjct: 258 IPSGIVVASQTERSQHQNREIAMRILASKLLAVEIAKRAEERAKIKGERISAEWGNQIRS 317
Query: 405 YVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASLDKDE 449
YVLHPY+MVKD RT+YEV + ++VLEG+LDGFI +YL ++ ++E
Sbjct: 318 YVLHPYKMVKDHRTDYEVGNAEAVLEGELDGFINAYLRQNIGREE 362
>TIGR_CMR|CJE_1628 [details] [associations]
symbol:CJE_1628 "peptide chain release factor 2"
species:195099 "Campylobacter jejuni RM1221" [GO:0003747
"translation release factor activity" evidence=ISS] [GO:0006415
"translational termination" evidence=ISS] HAMAP:MF_00094
InterPro:IPR000352 InterPro:IPR004374 InterPro:IPR005139
InterPro:IPR020853 Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745
SMART:SM00937 InterPro:IPR014720 GO:GO:0005737 Gene3D:3.30.160.20
EMBL:CP000025 GenomeReviews:CP000025_GR eggNOG:COG1186
GO:GO:0016149 RefSeq:YP_179609.1 ProteinModelPortal:Q5HSX6
STRING:Q5HSX6 GeneID:3232256 KEGG:cjr:CJE1628 PATRIC:20045053
HOGENOM:HOG000074814 KO:K02836 OMA:KAWDMLR ProtClustDB:PRK00578
BioCyc:CJEJ195099:GJC0-1658-MONOMER PANTHER:PTHR11075:SF6
TIGRFAMs:TIGR00020 Uniprot:Q5HSX6
Length = 365
Score = 697 (250.4 bits), Expect = 1.0e-68, P = 1.0e-68
Identities = 141/332 (42%), Positives = 200/332 (60%)
Query: 106 KNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLA 165
+N+ RL + N P+ W D AG I +E + +K + L + ++ LA
Sbjct: 27 ENIQTRLKEIEELENSPSFWSDVKQAGVIGKEKTKITNLLKNYENAFNALNDASELFDLA 86
Query: 166 REENDTXXXXXXXXXXXTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASM 225
ENDT + E+ LLSGE D + + + GAGGTES DWAS+
Sbjct: 87 NSENDTETLEALFNDAPKLEDTITSLEISMLLSGENDGKNAIVSIHPGAGGTESNDWASI 146
Query: 226 VLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPF 285
+ +MY + +R G++V +D GE AG+K + V GE A+GY KAE G+HRLVR SPF
Sbjct: 147 LYRMYLRFCEREGFKVETLDFQEGEEAGLKDVSFLVKGENAYGYLKAENGIHRLVRTSPF 206
Query: 286 DSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHI 345
DS RRHTSF++V V P D ++I E D+RI+ +R+ GAGGQH N T+SAVRI H
Sbjct: 207 DSAGRRHTSFSSVMVSPEL-DDDIEIEIEEKDIRIDYYRASGAGGQHVNKTESAVRITHF 265
Query: 346 PTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTY 405
PTGI CQN+RSQH+NKA+A +L+SR+ +LE+ +Q ++ +T ++I WG+QIR+Y
Sbjct: 266 PTGIVVQCQNDRSQHKNKATAFKMLKSRLYELELMKQ--QDSANTGEKSEIGWGHQIRSY 323
Query: 406 VLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFI 437
VL PY+ VKD R+ S D++L+GD+ I
Sbjct: 324 VLFPYQQVKDNRSGEAFSQVDNILDGDIKKMI 355
>DICTYBASE|DDB_G0288835 [details] [associations]
symbol:prfB "class I peptide chain release factor"
species:44689 "Dictyostelium discoideum" [GO:0016149 "translation
release factor activity, codon specific" evidence=IEA] [GO:0006415
"translational termination" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0003747 "translation release factor activity"
evidence=IEA] InterPro:IPR000352 InterPro:IPR004374
InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745
SMART:SM00937 InterPro:IPR014720 dictyBase:DDB_G0288835
GO:GO:0005737 Gene3D:3.30.160.20 GenomeReviews:CM000154_GR
eggNOG:COG1186 EMBL:AAFI02000125 GO:GO:0016149
PANTHER:PTHR11075:SF6 RefSeq:XP_636549.1 ProteinModelPortal:Q54IC8
STRING:Q54IC8 EnsemblProtists:DDB0237485 GeneID:8626834
KEGG:ddi:DDB_G0288835 InParanoid:Q54IC8 OMA:LINESHN Uniprot:Q54IC8
Length = 424
Score = 605 (218.0 bits), Expect = 2.0e-61, Sum P(2) = 2.0e-61
Identities = 118/302 (39%), Positives = 181/302 (59%)
Query: 145 MKEVKAFEQELLEHIDMIKLAREENDTXXXXXXXXXXXTMRRKSKEKELDALLSGELDPC 204
++E+ +E ++++++++++ D + E E+ AL++G+ D
Sbjct: 124 IEELNLLSKEFNDYLEVVEMSKNIGDNDWLKETRSLINQLFSNCSELEVKALMNGKDDSK 183
Query: 205 SCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGE 264
C +E+QAGAGG +SMDW ++ +MY W R+GY V ++D GE G + A++K+DG
Sbjct: 184 GCLLEIQAGAGGNDSMDWTKILFEMYCKWGARKGYNVEIIDTADGEF-GYRHASLKIDGH 242
Query: 265 YAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFR 324
A+G+ + E+G+HRL+RISPF S +RHTSFA+V V P S D S + I+ DL E R
Sbjct: 243 NAYGWLRTEMGIHRLIRISPFSSSGKRHTSFASVVVYPIS-DDSIKINIDPKDLHFETLR 301
Query: 325 SGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQ 384
S GAGGQH N T+SAVRI+HIPTGI+ +ERSQHQNK++ + +L+S++ E+ ++ +
Sbjct: 302 SSGAGGQHVNKTESAVRIVHIPTGISVLSSSERSQHQNKSNGLLLLKSKLYSHELKKKIE 361
Query: 385 MNAEHTQSLTDISWGNQ--IRTYVLHPYRMVKDLRTNYEVSDPDSVLEGD--LDGFILSY 440
L SW + +R Y +HP VKD RT EV +L+G+ LD I
Sbjct: 362 AEKSFRDELGKNSWASDSVVRNYSMHPQERVKDQRTGIEVLQISKILDGEEELDNMIKKA 421
Query: 441 LS 442
LS
Sbjct: 422 LS 423
Score = 41 (19.5 bits), Expect = 2.0e-61, Sum P(2) = 2.0e-61
Identities = 13/31 (41%), Positives = 15/31 (48%)
Query: 90 AAIAQSIQVIKKRLQWKNLNVRLNLLSAELN 120
A+ +I IK Q K LNLLS E N
Sbjct: 105 ASNMDTINQIKNYNQTKQSIEELNLLSKEFN 135
>TAIR|locus:2158936 [details] [associations]
symbol:HCF109 "high chlorophyll fluorescent 109"
species:3702 "Arabidopsis thaliana" [GO:0003747 "translation
release factor activity" evidence=IEA;ISS] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0006415 "translational termination"
evidence=IEA;ISS;IMP] [GO:0016149 "translation release factor
activity, codon specific" evidence=IEA] [GO:0009507 "chloroplast"
evidence=IDA] [GO:0009570 "chloroplast stroma" evidence=IDA]
[GO:0006364 "rRNA processing" evidence=RCA] [GO:0009902
"chloroplast relocation" evidence=RCA] [GO:0009965 "leaf
morphogenesis" evidence=RCA] [GO:0010027 "thylakoid membrane
organization" evidence=RCA] [GO:0010207 "photosystem II assembly"
evidence=RCA] [GO:0030154 "cell differentiation" evidence=RCA]
[GO:0034660 "ncRNA metabolic process" evidence=RCA] [GO:0035304
"regulation of protein dephosphorylation" evidence=RCA] [GO:0042793
"transcription from plastid promoter" evidence=RCA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=RCA]
[GO:0006396 "RNA processing" evidence=IMP] [GO:0009657 "plastid
organization" evidence=IMP] InterPro:IPR000352 InterPro:IPR004374
InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745
SMART:SM00937 InterPro:IPR014720 EMBL:CP002688 GO:GO:0009570
Gene3D:3.30.160.20 GO:GO:0006396 GO:GO:0009657 GO:GO:0006415
GO:GO:0016149 EMBL:AB018112 HOGENOM:HOG000074814
PANTHER:PTHR11075:SF6 TIGRFAMs:TIGR00020 HSSP:P07012
UniGene:At.9505 EMBL:AY056234 EMBL:AY117253 EMBL:AY084711
IPI:IPI00546331 RefSeq:NP_851096.1 ProteinModelPortal:Q9LVY0
SMR:Q9LVY0 STRING:Q9LVY0 PRIDE:Q9LVY0 EnsemblPlants:AT5G36170.1
GeneID:833614 KEGG:ath:AT5G36170 TAIR:At5g36170 InParanoid:Q9LVY0
OMA:MGWGSQI PhylomeDB:Q9LVY0 ProtClustDB:CLSN2680355
ArrayExpress:Q9LVY0 Genevestigator:Q9LVY0 Uniprot:Q9LVY0
Length = 456
Score = 610 (219.8 bits), Expect = 1.7e-59, P = 1.7e-59
Identities = 129/348 (37%), Positives = 193/348 (55%)
Query: 96 IQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQEL 155
++ I+ + L + L ++ + WDD A L +M+ + F+ +
Sbjct: 95 VEEIRASANLQQLEQEITNLESKATDTSFWDDRTKAQETLSSLNDLKDRMRLLSEFKTMV 154
Query: 156 LEHIDMIKLAREENDTXXXXXXXXXXXTMR-RKSKEK-ELDALLSGELDPCSCYIEVQAG 213
+ ++KL E + T KS +K EL LLSG D + + AG
Sbjct: 155 EDAETIVKLTEEMDSTDVSLLEEAMGIIKELNKSLDKFELTQLLSGPYDKEGAVVYITAG 214
Query: 214 AGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAE 273
AGGT++ DWA M+L+MY W +++ Y+ +++ GE AGIK AT++++G YA+GY E
Sbjct: 215 AGGTDAQDWADMLLRMYMRWGEKQRYKTKVVEMSNGEEAGIKSATLEIEGRYAYGYISGE 274
Query: 274 VGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHA 333
G HR+VR SPF+S R TSF+ V V+P + + ++I E DL I R+GG GGQ+
Sbjct: 275 KGTHRIVRQSPFNSKGLRQTSFSGVEVMPLLPEEAVGIEIPEEDLDISFTRAGGKGGQNV 334
Query: 334 NTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSL 393
N ++AVRI HIPTG+ C ERSQ NK A+ L++++ + ++A E
Sbjct: 335 NKVETAVRITHIPTGVAVRCTEERSQLANKTRALIRLKAKLMVIAEEQRATEIKEIRGDA 394
Query: 394 TDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYL 441
WG QIR YV HPY++VKD+RT +E SD SV++GDLD FI +YL
Sbjct: 395 VKAEWGQQIRNYVFHPYKLVKDVRTGHETSDITSVMDGDLDPFIKAYL 442
>TIGR_CMR|CBU_1965 [details] [associations]
symbol:CBU_1965 "peptide chain release factor 1"
species:227377 "Coxiella burnetii RSA 493" [GO:0003747 "translation
release factor activity" evidence=ISS] [GO:0006415 "translational
termination" evidence=ISS] HAMAP:MF_00093 InterPro:IPR000352
InterPro:IPR004373 InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462
PROSITE:PS00745 SMART:SM00937 InterPro:IPR014720 GO:GO:0005737
Gene3D:3.30.160.20 EMBL:AE016828 GenomeReviews:AE016828_GR
GO:GO:0016149 EMBL:X78969 eggNOG:COG0216 HOGENOM:HOG000074815
KO:K02835 OMA:EMPEINP ProtClustDB:PRK00591 TIGRFAMs:TIGR00019
PIR:A61648 RefSeq:NP_820940.1 ProteinModelPortal:P47849 SMR:P47849
PRIDE:P47849 GeneID:1209878 KEGG:cbu:CBU_1965 PATRIC:17932673
BioCyc:CBUR227377:GJ7S-1939-MONOMER Uniprot:P47849
Length = 361
Score = 478 (173.3 bits), Expect = 1.6e-45, P = 1.6e-45
Identities = 117/337 (34%), Positives = 179/337 (53%)
Query: 106 KNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLA 165
K L R + + L+ + +D + +E+ L +K + F+Q + I+ +
Sbjct: 10 KTLTYRYSEIGGLLSDSTVINDQDRYRELGKEYAQLEPIVKCFQQFQQNE-KAIESAEEM 68
Query: 166 REENDTXXXXXXXXXXX--TMRRKSKEKELDALL--SGELDPCSCYIEVQAGAGGTESMD 221
++E D T++++ E +L LL D + ++E++AG GG E+
Sbjct: 69 QQEKDPELRKLAEEELEQLTLKKEELEDQLKLLLVPKDPNDERNVFLEIRAGTGGNEAAI 128
Query: 222 WASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVR 281
+A + +MY +A+ +G+RV ++ GE G K +V GE + K E G HR+ R
Sbjct: 129 FAGDLFRMYARYAETKGWRVNIVSAHEGEHGGFKEVIARVIGEGVYSQLKFESGAHRVQR 188
Query: 282 ISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVR 341
+ +S R HTS VA++P D ++IN ++LRI+ FR+ GAGGQH N TDSA+R
Sbjct: 189 VPVTESQGRIHTSACTVAIMPEV-DEIDQIKINPAELRIDTFRASGAGGQHVNRTDSAIR 247
Query: 342 IIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDIS-WGN 400
I H+PTG+ CQ+ERSQH+NKA AM +LQS++ E A+Q Q A +SL
Sbjct: 248 ITHLPTGVVVECQDERSQHKNKARAMSLLQSKLLAAERAKQDQEQAAKRKSLVGSGDRSE 307
Query: 401 QIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFI 437
+IRTY P V D R N + D V+EGDLD I
Sbjct: 308 RIRTYNF-PQGRVTDHRINLTLYQLDEVIEGDLDPVI 343
>UNIPROTKB|Q9KQ25 [details] [associations]
symbol:prfA "Peptide chain release factor 1" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0003747
"translation release factor activity" evidence=ISS] [GO:0006415
"translational termination" evidence=ISS] HAMAP:MF_00093
InterPro:IPR000352 InterPro:IPR004373 InterPro:IPR005139
Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745 SMART:SM00937
InterPro:IPR014720 GO:GO:0005737 EMBL:AE003852
GenomeReviews:AE003852_GR Gene3D:3.30.160.20 GO:GO:0003747
GO:GO:0016149 eggNOG:COG0216 KO:K02835 OMA:GEAGGYK
ProtClustDB:PRK00591 TIGRFAMs:TIGR00019 PIR:B82109
RefSeq:NP_231810.1 ProteinModelPortal:Q9KQ25 SMR:Q9KQ25
DNASU:2613315 GeneID:2613315 KEGG:vch:VC2179 PATRIC:20083371
Uniprot:Q9KQ25
Length = 362
Score = 472 (171.2 bits), Expect = 7.1e-45, P = 7.1e-45
Identities = 113/323 (34%), Positives = 176/323 (54%)
Query: 119 LNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTXXXXXXX 178
L P + D +S+E+ L + +A++Q + + ++A+E++
Sbjct: 23 LGDPTVIGDQNKFRALSKEYSQLEEITQCFQAYQQAKEDLVAAEEMAQEDDAEMREMAQD 82
Query: 179 ---XXXXTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQ 235
+ R + E ++ L D +C++E++AGAGG E+ +A + +MY +A+
Sbjct: 83 EIKAAKAAIERLTDELQILLLPKDPNDDRNCFLEIRAGAGGDEAGIFAGDLFRMYSRFAE 142
Query: 236 RRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSF 295
++G+R+ +M E G K KV+G+ A+G K E G HR+ R+ ++ R HTS
Sbjct: 143 KKGWRIEVMSSSEAEHGGYKEMIAKVNGDGAYGTLKFESGGHRVQRVPATEAQGRIHTSA 202
Query: 296 AAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQN 355
VAV+P ++ +I SDL+I+ FRS GAGGQH NTTDSA+RI H+PTGI CQ+
Sbjct: 203 CTVAVMPEIPEAEIP-EIKASDLKIDTFRSSGAGGQHVNTTDSAIRITHLPTGIVVECQD 261
Query: 356 ERSQHQNKASAMGVLQSRVNQLEIA-RQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVK 414
ERSQH+NKA AM VL +R+ Q E + R A+++ L ++IRTY +P V
Sbjct: 262 ERSQHKNKAKAMSVLAARIAQAEESKRAAEISDTRRNLLGSGDRSDRIRTYN-YPQGRVS 320
Query: 415 DLRTNYEVSDPDSVLEGDLDGFI 437
D R N V V+EGD+ I
Sbjct: 321 DHRINLTVYRLTEVMEGDMQSLI 343
>TIGR_CMR|VC_2179 [details] [associations]
symbol:VC_2179 "peptide chain release factor 1" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0003747 "translation release
factor activity" evidence=ISS] [GO:0006415 "translational
termination" evidence=ISS] HAMAP:MF_00093 InterPro:IPR000352
InterPro:IPR004373 InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462
PROSITE:PS00745 SMART:SM00937 InterPro:IPR014720 GO:GO:0005737
EMBL:AE003852 GenomeReviews:AE003852_GR Gene3D:3.30.160.20
GO:GO:0003747 GO:GO:0016149 eggNOG:COG0216 KO:K02835 OMA:GEAGGYK
ProtClustDB:PRK00591 TIGRFAMs:TIGR00019 PIR:B82109
RefSeq:NP_231810.1 ProteinModelPortal:Q9KQ25 SMR:Q9KQ25
DNASU:2613315 GeneID:2613315 KEGG:vch:VC2179 PATRIC:20083371
Uniprot:Q9KQ25
Length = 362
Score = 472 (171.2 bits), Expect = 7.1e-45, P = 7.1e-45
Identities = 113/323 (34%), Positives = 176/323 (54%)
Query: 119 LNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTXXXXXXX 178
L P + D +S+E+ L + +A++Q + + ++A+E++
Sbjct: 23 LGDPTVIGDQNKFRALSKEYSQLEEITQCFQAYQQAKEDLVAAEEMAQEDDAEMREMAQD 82
Query: 179 ---XXXXTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQ 235
+ R + E ++ L D +C++E++AGAGG E+ +A + +MY +A+
Sbjct: 83 EIKAAKAAIERLTDELQILLLPKDPNDDRNCFLEIRAGAGGDEAGIFAGDLFRMYSRFAE 142
Query: 236 RRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSF 295
++G+R+ +M E G K KV+G+ A+G K E G HR+ R+ ++ R HTS
Sbjct: 143 KKGWRIEVMSSSEAEHGGYKEMIAKVNGDGAYGTLKFESGGHRVQRVPATEAQGRIHTSA 202
Query: 296 AAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQN 355
VAV+P ++ +I SDL+I+ FRS GAGGQH NTTDSA+RI H+PTGI CQ+
Sbjct: 203 CTVAVMPEIPEAEIP-EIKASDLKIDTFRSSGAGGQHVNTTDSAIRITHLPTGIVVECQD 261
Query: 356 ERSQHQNKASAMGVLQSRVNQLEIA-RQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVK 414
ERSQH+NKA AM VL +R+ Q E + R A+++ L ++IRTY +P V
Sbjct: 262 ERSQHKNKAKAMSVLAARIAQAEESKRAAEISDTRRNLLGSGDRSDRIRTYN-YPQGRVS 320
Query: 415 DLRTNYEVSDPDSVLEGDLDGFI 437
D R N V V+EGD+ I
Sbjct: 321 DHRINLTVYRLTEVMEGDMQSLI 343
>TIGR_CMR|CHY_2563 [details] [associations]
symbol:CHY_2563 "peptide chain release factor 1"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0003747 "translation release factor activity" evidence=ISS]
[GO:0006415 "translational termination" evidence=ISS]
HAMAP:MF_00093 InterPro:IPR000352 InterPro:IPR004373
InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745
SMART:SM00937 InterPro:IPR014720 GO:GO:0005737 EMBL:CP000141
GenomeReviews:CP000141_GR Gene3D:3.30.160.20 GO:GO:0016149
eggNOG:COG0216 HOGENOM:HOG000074815 KO:K02835 HSSP:P0A7I0
OMA:EMPEINP ProtClustDB:PRK00591 TIGRFAMs:TIGR00019
RefSeq:YP_361356.1 ProteinModelPortal:Q3A928 SMR:Q3A928
STRING:Q3A928 GeneID:3727190 KEGG:chy:CHY_2563 PATRIC:21278175
BioCyc:CHYD246194:GJCN-2562-MONOMER Uniprot:Q3A928
Length = 358
Score = 466 (169.1 bits), Expect = 3.1e-44, P = 3.1e-44
Identities = 108/258 (41%), Positives = 154/258 (59%)
Query: 185 RRKSKEKELDALL--SGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVT 242
RR+ E +L LL D + +E++AGAGG E+ +A + +MY +A R G++V
Sbjct: 87 RREELEAKLKILLLPKDPNDEKNVIMEIRAGAGGEEAALFAGDLFRMYSKYADRMGWKVE 146
Query: 243 LMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIP 302
+MD P ++ G K ++G+ + K E GVHR+ R+ +SG R HTS A VAV+P
Sbjct: 147 IMDSHPTDLGGFKEVIFTIEGKGVYSRMKFESGVHRVQRVPTTESGGRIHTSTATVAVLP 206
Query: 303 NSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQN 362
+ + V+IN +DLRI+ F + GAGGQH N T+SAVRI HIPTGI TCQ+E+SQH+N
Sbjct: 207 EAEE--VEVEINPNDLRIDVFCASGAGGQHVNKTESAVRITHIPTGIVVTCQDEKSQHKN 264
Query: 363 KASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQ---IRTYVLHPYRMVKDLRTN 419
K AM +L++R+ L+ ARQ Q + + + G++ IRTY P V D R
Sbjct: 265 KERAMKILRARL--LDKARQEQEAELASARKSQVGTGDRSERIRTYNF-PQNRVTDHRIG 321
Query: 420 YEVSDPDSVLEGDLDGFI 437
+ D+VLEGDLD I
Sbjct: 322 LTLHRLDAVLEGDLDEII 339
>UNIPROTKB|P0A7I0 [details] [associations]
symbol:prfA "peptide chain release factor RF1"
species:83333 "Escherichia coli K-12" [GO:0043022 "ribosome
binding" evidence=IDA] [GO:0016149 "translation release factor
activity, codon specific" evidence=IEA;IDA] [GO:0006415
"translational termination" evidence=IEA;IMP] [GO:0006412
"translation" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
HAMAP:MF_00093 InterPro:IPR000352 InterPro:IPR004373
InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745
SMART:SM00937 InterPro:IPR014720 GO:GO:0005737 EMBL:U00096
EMBL:AP009048 GenomeReviews:AP009048_GR GenomeReviews:U00096_GR
Gene3D:3.30.160.20 GO:GO:0043022 GO:GO:0016149 EMBL:M25323
EMBL:U18555 EMBL:D28567 PDB:2B3T PDBsum:2B3T eggNOG:COG0216
HOGENOM:HOG000074815 KO:K02835 OMA:EMPEINP ProtClustDB:PRK00591
TIGRFAMs:TIGR00019 EMBL:M11519 PIR:H64867 RefSeq:NP_415729.1
RefSeq:YP_489478.1 ProteinModelPortal:P0A7I0 SMR:P0A7I0
DIP:DIP-35936N IntAct:P0A7I0 MINT:MINT-1219241 PaxDb:P0A7I0
PRIDE:P0A7I0 EnsemblBacteria:EBESCT00000004821
EnsemblBacteria:EBESCT00000015260 GeneID:12931113 GeneID:949002
KEGG:ecj:Y75_p1183 KEGG:eco:b1211 PATRIC:32117674 EchoBASE:EB0754
EcoGene:EG10761 BioCyc:EcoCyc:EG10761-MONOMER
BioCyc:ECOL316407:JW1202-MONOMER EvolutionaryTrace:P0A7I0
Genevestigator:P0A7I0 Uniprot:P0A7I0
Length = 360
Score = 464 (168.4 bits), Expect = 5.0e-44, P = 5.0e-44
Identities = 113/308 (36%), Positives = 169/308 (54%)
Query: 134 ISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTXXXXXXXXXXXTMRRKSKEKEL 193
+SRE+ L + ++Q + E I+ ++ ++ + + + E++L
Sbjct: 38 LSREYAQLSDVSRCFTDWQQ-VQEDIETAQMMLDDPEMREMAQDELREAKEKSEQLEQQL 96
Query: 194 DALLSGELDPC---SCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGE 250
LL + DP + ++EV+AG GG E+ +A + +MY +A+ R +RV +M GE
Sbjct: 97 QVLLLPK-DPDDERNAFLEVRAGTGGDEAALFAGDLFRMYSRYAEARRWRVEIMSASEGE 155
Query: 251 IAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTH 310
G K K+ G+ +G K E G HR+ R+ +S R HTS VAV+P D+
Sbjct: 156 HGGYKEIIAKISGDGVYGRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPELPDAELP 215
Query: 311 VQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVL 370
IN +DLRI+ FRS GAGGQH NTTDSA+RI H+PTGI CQ+ERSQH+NKA A+ VL
Sbjct: 216 -DINPADLRIDTFRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKALSVL 274
Query: 371 QSRVNQLEIARQAQMNAEHTQSLTDIS-WGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVL 429
+R++ E+A++ Q A ++L ++ RTY P V D R N + D V+
Sbjct: 275 GARIHAAEMAKRQQAEASTRRNLLGSGDRSDRNRTYNF-PQGRVTDHRINLTLYRLDEVM 333
Query: 430 EGDLDGFI 437
EG LD I
Sbjct: 334 EGKLDMLI 341
>UNIPROTKB|P66016 [details] [associations]
symbol:prfA "Peptide chain release factor 1" species:1773
"Mycobacterium tuberculosis" [GO:0040007 "growth" evidence=IMP]
HAMAP:MF_00093 InterPro:IPR000352 InterPro:IPR004373
InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745
SMART:SM00937 InterPro:IPR014720 GO:GO:0005737 GO:GO:0040007
EMBL:AE000516 GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR
EMBL:BX842576 Gene3D:3.30.160.20 GO:GO:0016149 eggNOG:COG0216
HOGENOM:HOG000074815 KO:K02835 ProtClustDB:PRK00591
TIGRFAMs:TIGR00019 PIR:G70773 RefSeq:NP_215815.1 RefSeq:NP_335786.1
RefSeq:YP_006514676.1 ProteinModelPortal:P66016 SMR:P66016
PRIDE:P66016 EnsemblBacteria:EBMYCT00000003633
EnsemblBacteria:EBMYCT00000071350 GeneID:13319881 GeneID:886948
GeneID:924722 KEGG:mtc:MT1338 KEGG:mtu:Rv1299 KEGG:mtv:RVBD_1299
PATRIC:18124710 TubercuList:Rv1299 OMA:VEIHAND Uniprot:P66016
Length = 357
Score = 462 (167.7 bits), Expect = 8.1e-44, P = 8.1e-44
Identities = 129/345 (37%), Positives = 181/345 (52%)
Query: 115 LSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTXXX 174
L L P L +P A R+ R ++ + A ++L D ++ ARE
Sbjct: 18 LELALADPALHSNPAEARRVGRR----FARLAPIVATHRKLTSARDDLETARE----LVA 69
Query: 175 XXXXXXXXTMRRKSKEKELDALLSGEL---DPCSC---YIEVQAGAGGTESMDWASMVLQ 228
+++ ELDA L+ L DP +EV++G GG ES +A+ + +
Sbjct: 70 SDESFAAEVAALEARVGELDAQLTDMLAPRDPHDADDIVLEVKSGEGGEESALFAADLAR 129
Query: 229 MYKSWAQRRGYRVTLMDEMPGEIAGIKRATI----KVDG-EYAFGYAKAEVGVHRLVRIS 283
MY +A+R G+ VT++DE ++ G K AT+ K D + + K E GVHR+ R+
Sbjct: 130 MYIRYAERHGWAVTVLDETTSDLGGYKDATLAIASKADTPDGVWSRMKFEGGVHRVQRVP 189
Query: 284 PFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRII 343
+S R HTS A V V P + VQI+ESDLRI+ FRS G GGQ NTTDSAVRI
Sbjct: 190 VTESQGRVHTSAAGVLVYPEPEEVG-QVQIDESDLRIDVFRSSGKGGQGVNTTDSAVRIT 248
Query: 344 HIPTGITATCQNERSQHQNKASAMGVLQSRVNQL-EIARQAQMNAEHTQSLTDISWGNQI 402
H+PTGI TCQNERSQ QNK A+ VL +R+ + E A +A+ + + +I
Sbjct: 249 HLPTGIVVTCQNERSQLQNKTRALQVLAARLQAMAEEQALADASADRASQIRTVDRSERI 308
Query: 403 RTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASLDK 447
RTY P + D R Y+ + D VL+GDLD + LSA+ DK
Sbjct: 309 RTYNF-PENRITDHRIGYKSHNLDQVLDGDLDA-LFDALSAA-DK 350
>TIGR_CMR|CPS_3552 [details] [associations]
symbol:CPS_3552 "peptide chain release factor 1"
species:167879 "Colwellia psychrerythraea 34H" [GO:0003747
"translation release factor activity" evidence=ISS] [GO:0006415
"translational termination" evidence=ISS] HAMAP:MF_00093
InterPro:IPR000352 InterPro:IPR004373 InterPro:IPR005139
Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745 SMART:SM00937
InterPro:IPR014720 GO:GO:0005737 Gene3D:3.30.160.20 EMBL:CP000083
GenomeReviews:CP000083_GR GO:GO:0016149 eggNOG:COG0216
HOGENOM:HOG000074815 KO:K02835 HSSP:P0A7I0 OMA:EMPEINP
TIGRFAMs:TIGR00019 RefSeq:YP_270226.1 ProteinModelPortal:Q47Y94
SMR:Q47Y94 STRING:Q47Y94 GeneID:3522324 KEGG:cps:CPS_3552
PATRIC:21470035 BioCyc:CPSY167879:GI48-3580-MONOMER Uniprot:Q47Y94
Length = 362
Score = 451 (163.8 bits), Expect = 1.2e-42, P = 1.2e-42
Identities = 91/233 (39%), Positives = 143/233 (61%)
Query: 202 DPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKV 261
D +C++E++AGAGG E+ +A + +MY +A+++G+++ +M+ E G K +KV
Sbjct: 109 DDNNCFVEIRAGAGGDEAAIFAGDLFRMYSRYAEKKGWKIEVMNSNESEQGGYKELIMKV 168
Query: 262 DGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIE 321
+GE FG+ K E G HR+ R+ +S R HTS V V+P ++ ++IN++DL+++
Sbjct: 169 NGEGVFGHMKFESGGHRVQRVPATESQGRVHTSACTVVVMPEIPEADA-IEINKADLKVD 227
Query: 322 RFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIA- 380
FR+ GAGGQH N TDSA+RI HIPTG+ CQ +RSQH+N+A AM VLQ+R+ Q E
Sbjct: 228 TFRASGAGGQHVNKTDSAIRITHIPTGVVVECQEQRSQHKNRAQAMSVLQARLQQAEDEK 287
Query: 381 RQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDL 433
R+++ + + +IRTY RM D R N + + ++EG L
Sbjct: 288 RRSEEESSRRNLVASGDRSERIRTYNFPQGRM-SDHRINLTLYRLNEIMEGSL 339
>TIGR_CMR|SO_3833 [details] [associations]
symbol:SO_3833 "peptide chain release factor 1"
species:211586 "Shewanella oneidensis MR-1" [GO:0003747
"translation release factor activity" evidence=ISS] [GO:0006415
"translational termination" evidence=ISS] HAMAP:MF_00093
InterPro:IPR000352 InterPro:IPR004373 InterPro:IPR005139
Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745 SMART:SM00937
InterPro:IPR014720 GO:GO:0005737 Gene3D:3.30.160.20 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0016149 eggNOG:COG0216
HOGENOM:HOG000074815 KO:K02835 OMA:GEAGGYK ProtClustDB:PRK00591
TIGRFAMs:TIGR00019 RefSeq:NP_719366.1 ProteinModelPortal:Q8EAR3
SMR:Q8EAR3 GeneID:1171478 KEGG:son:SO_3833 PATRIC:23527352
Uniprot:Q8EAR3
Length = 363
Score = 449 (163.1 bits), Expect = 1.9e-42, P = 1.9e-42
Identities = 108/311 (34%), Positives = 171/311 (54%)
Query: 134 ISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTXXXXXXXXXXXTMRRKSK--EK 191
+S+E+ L + KA++Q + ++ K EE+D + + + E
Sbjct: 38 LSKEYSQLEEVVAGFKAYQQAQAD-LESAKEMLEEDDAEMREMAQEEIKAAKVELERLEA 96
Query: 192 ELDALL--SGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPG 249
EL LL D + +IE++AGAGG E+ +A + +MY +A+ +++ +M G
Sbjct: 97 ELQILLLPKDPNDDTNAFIEIRAGAGGDEAAIFAGDLFRMYSRYAEANRWQLEIMSSNEG 156
Query: 250 EIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSST 309
E G K +KV GE A+G K E G HR+ R+ +S R HTS V V+ ++
Sbjct: 157 EHGGFKEIIVKVSGEGAYGKLKFESGGHRVQRVPETESQGRVHTSAVTVVVMHEVPEAEA 216
Query: 310 HVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGV 369
+ IN +DL+++ FRS GAGGQH N TDSA+RI HIPTGI CQ++RSQH+N+A AM V
Sbjct: 217 -ISINPADLKVDTFRSSGAGGQHVNKTDSAIRITHIPTGIVVECQDQRSQHKNRAQAMSV 275
Query: 370 LQSRVNQLEIARQAQMNAEHTQSLTDISWGNQ---IRTYVLHPYRMVKDLRTNYEVSDPD 426
L +R+ +E + + +AE + + ++ G++ +RTY P V + R N + +
Sbjct: 276 LAARIQAVE--DEKRRSAEESTRRSLVASGDRSERVRTYNF-PQGRVSEHRINLTLYRLN 332
Query: 427 SVLEGDLDGFI 437
V+EGDLD +
Sbjct: 333 EVMEGDLDAIL 343
>TIGR_CMR|SPO_2461 [details] [associations]
symbol:SPO_2461 "peptide chain release factor 1"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0003747 "translation
release factor activity" evidence=ISS] [GO:0006415 "translational
termination" evidence=ISS] HAMAP:MF_00093 InterPro:IPR000352
InterPro:IPR004373 InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462
PROSITE:PS00745 SMART:SM00937 InterPro:IPR014720 GO:GO:0005737
EMBL:CP000031 GenomeReviews:CP000031_GR Gene3D:3.30.160.20
GO:GO:0016149 eggNOG:COG0216 HOGENOM:HOG000074815 KO:K02835
HSSP:P0A7I0 ProtClustDB:PRK00591 TIGRFAMs:TIGR00019 OMA:SVMLEIR
RefSeq:YP_167678.1 ProteinModelPortal:Q5LQM7 GeneID:3194030
KEGG:sil:SPO2461 PATRIC:23378321 Uniprot:Q5LQM7
Length = 351
Score = 449 (163.1 bits), Expect = 1.9e-42, P = 1.9e-42
Identities = 110/307 (35%), Positives = 169/307 (55%)
Query: 134 ISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTXXXXXXXXXXXTMRRKSKEKEL 193
+++E+ L ++++ A+ Q L +D + + D R E+ L
Sbjct: 33 LAKEYSDLRPVVEQIAAWRQ-LCADMDEARAMLSDPDMKALAEEELPLLKARLPEAEQAL 91
Query: 194 D-ALLSGEL-DPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEI 251
ALL + D +E++ G GG E+ +A +L+MY+ +A+ RG+++ L++ E+
Sbjct: 92 QLALLPKDAADARPAMLEIRPGTGGDEAALFAGDLLRMYQRYAEARGWKLELIELQETEL 151
Query: 252 AGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHV 311
GIK ++ GE F K E GVHR+ R+ +SG R HTS A VAV+P + D +
Sbjct: 152 GGIKEVVARISGENVFARLKYESGVHRVQRVPETESGGRIHTSAATVAVLPEAQD--VDI 209
Query: 312 QINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQ 371
QI+ D+RI+ RS GAGGQH NTTDSAVRI H+P+GI T +E+SQH+N+ AM VL+
Sbjct: 210 QIDPGDIRIDTMRSSGAGGQHVNTTDSAVRITHLPSGIVVT-SSEKSQHRNREIAMQVLK 268
Query: 372 SRVNQLEIAR-QAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLE 430
+R+ LE R + +A + + +IRTY RM D R N + D+V++
Sbjct: 269 TRLYDLERQRLDRERSASRSAQVGTGDRSERIRTYNFPQGRMT-DHRINLTLYKLDAVMQ 327
Query: 431 GDLDGFI 437
GDLD I
Sbjct: 328 GDLDEVI 334
>TIGR_CMR|GSU_3104 [details] [associations]
symbol:GSU_3104 "peptide chain release factor 1"
species:243231 "Geobacter sulfurreducens PCA" [GO:0003747
"translation release factor activity" evidence=ISS] [GO:0006415
"translational termination" evidence=ISS] HAMAP:MF_00093
InterPro:IPR000352 InterPro:IPR004373 InterPro:IPR005139
Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745 SMART:SM00937
InterPro:IPR014720 GO:GO:0005737 Gene3D:3.30.160.20 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0016149 eggNOG:COG0216
HOGENOM:HOG000074815 KO:K02835 ProtClustDB:PRK00591
TIGRFAMs:TIGR00019 OMA:SVMLEIR RefSeq:NP_954145.1
ProteinModelPortal:Q748B1 SMR:Q748B1 GeneID:2688463
KEGG:gsu:GSU3104 PATRIC:22029063
BioCyc:GSUL243231:GH27-3086-MONOMER Uniprot:Q748B1
Length = 355
Score = 433 (157.5 bits), Expect = 9.6e-41, P = 9.6e-41
Identities = 109/331 (32%), Positives = 175/331 (52%)
Query: 106 KNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLA 165
+ L VR + L + L P + + R+SREH L ++ + +++ +LE ++ +
Sbjct: 6 EELEVRYHELESLLADPAVLGNQPEFRRLSREHNDLTPLIESYRTYKK-VLEEMEGNREL 64
Query: 166 REENDTXXXXXXXXXXXTMRRKSKEKELDALL--SGELDPCSCYIEVQAGAGGTESMDWA 223
+ + R++ E E+ LL D + +E++AG GG ES +A
Sbjct: 65 LADPEMKEMAQAELEELEQRQEELEGEIKLLLLPRDPNDDRNVILEIRAGTGGDESALFA 124
Query: 224 SMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRIS 283
+ +MY +A+R ++V +M E G K ++G+ F K E G HR+ R+
Sbjct: 125 GDLFRMYSRFAERNRWKVEVMSASESERGGFKEIVALIEGQGVFAKLKYESGTHRVQRVP 184
Query: 284 PFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRII 343
++ R HTS VAV+P + D V IN +DL+I+ +R+ GAGGQH N T+SAVRI
Sbjct: 185 ETEAQGRIHTSACTVAVLPEAED--IEVDINPADLKIDVYRASGAGGQHVNKTESAVRIT 242
Query: 344 HIPTGITATCQNERSQHQNKASAMGVLQSRV-NQLEIARQAQMNAEHTQSLTDISWGNQI 402
HIPTGI CQ+ERSQ +N+A AM VL++++ + L + A++ A+ Q + +I
Sbjct: 243 HIPTGIVVECQDERSQIKNRAKAMKVLKTKILDGLHQEQNARIAADRKQQVGSGDRSERI 302
Query: 403 RTYVLHPYRMVKDLRTNYEVSDPDSVLEGDL 433
RTY RM D R + DS++EGD+
Sbjct: 303 RTYNFPQGRMT-DHRIGLTLYRLDSLMEGDI 332
>TAIR|locus:2041409 [details] [associations]
symbol:AT2G47020 species:3702 "Arabidopsis thaliana"
[GO:0003747 "translation release factor activity" evidence=IEA;ISS]
[GO:0005737 "cytoplasm" evidence=ISM;IEA] [GO:0006415
"translational termination" evidence=IEA;ISS] [GO:0009507
"chloroplast" evidence=ISM] [GO:0016149 "translation release factor
activity, codon specific" evidence=IEA] InterPro:IPR000352
InterPro:IPR004373 InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462
SMART:SM00937 InterPro:IPR014720 GO:GO:0005737 EMBL:CP002685
GenomeReviews:CT485783_GR Gene3D:3.30.160.20 GO:GO:0016149
KO:K02835 OMA:EMPEINP TIGRFAMs:TIGR00019 EMBL:BT030058
IPI:IPI00517548 RefSeq:NP_182225.3 UniGene:At.43988
ProteinModelPortal:A2RVR7 SMR:A2RVR7 PRIDE:A2RVR7
EnsemblPlants:AT2G47020.1 GeneID:819316 KEGG:ath:AT2G47020
TAIR:At2g47020 PhylomeDB:A2RVR7 Genevestigator:Q3E6W0
Uniprot:A2RVR7
Length = 413
Score = 430 (156.4 bits), Expect = 2.0e-40, P = 2.0e-40
Identities = 113/350 (32%), Positives = 181/350 (51%)
Query: 96 IQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQEL 155
I+++ +RL + R +L +N+P P R ++E L M + +
Sbjct: 53 IKIMDQRLS--AIEHRNAVLQKLINQPEY--SPEEFSRANKELRKLRDSMLLINDLRAKQ 108
Query: 156 LEHIDMIKLAREENDTXXXXXXXXXXXTMRRKSKEKELDALL------SGELDPCSCYIE 209
E ID +K E+ +EK L LL E D C +E
Sbjct: 109 KE-IDGLKSLVSESSDDKDMLDLAVGELDEAVEEEKRLQTLLLKSLLPKDEADERDCILE 167
Query: 210 VQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGY 269
V+AG GG E+ +A + +MY+ ++Q++G++ ++D ++ G K A+ + G +G
Sbjct: 168 VRAGTGGEEASLFAMDIFRMYERYSQKKGWKFDIVDITESDMKGYKEASAAICGASVYGK 227
Query: 270 AKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAG 329
K E G+HR+ RI + R HTS +VA++P + + VQ+ DLRI+ +RSGG+G
Sbjct: 228 LKFESGIHRVQRIPITEKSGRIHTSAISVAILPQADE--VDVQLRNEDLRIDTYRSGGSG 285
Query: 330 GQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIAR-QAQMNAE 388
GQHANTT+SAVRIIH+PTG+ + Q+ERSQH N+A A+ VL +R+ ++E R Q+ +
Sbjct: 286 GQHANTTNSAVRIIHLPTGMMVSIQDERSQHMNRAKALKVLCARLYEIERLRIQSSRSKL 345
Query: 389 HTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGD-LDGFI 437
+ + +IRTY P V D R + +++G+ LD FI
Sbjct: 346 RSDQIGSGDRSGRIRTYNF-PQGRVTDHRVGITHHAIEDMMQGENLDMFI 394
>DICTYBASE|DDB_G0283175 [details] [associations]
symbol:prfA "peptide chain release factor 1"
species:44689 "Dictyostelium discoideum" [GO:0016149 "translation
release factor activity, codon specific" evidence=IEA] [GO:0006415
"translational termination" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0003747 "translation release factor activity"
evidence=IEA] InterPro:IPR000352 InterPro:IPR005139 Pfam:PF00472
Pfam:PF03462 PROSITE:PS00745 SMART:SM00937 InterPro:IPR014720
dictyBase:DDB_G0283175 GO:GO:0005737 GenomeReviews:CM000153_GR
Gene3D:3.30.160.20 EMBL:AAFI02000051 GO:GO:0016149 eggNOG:COG0216
KO:K02835 RefSeq:XP_639198.1 ProteinModelPortal:Q54RE7
STRING:Q54RE7 EnsemblProtists:DDB0237484 GeneID:8623973
KEGG:ddi:DDB_G0283175 InParanoid:Q54RE7 OMA:HAAICIN
ProtClustDB:CLSZ2430394 Uniprot:Q54RE7
Length = 430
Score = 419 (152.6 bits), Expect = 2.9e-39, P = 2.9e-39
Identities = 104/303 (34%), Positives = 164/303 (54%)
Query: 139 GSLMGKMKEVKAFEQELLEHIDMIKLAREENDTXXXXXXXXXXXTMRRKSKEKEL-DALL 197
G L+ K+KE+K + L+E D E+ + EK+L +LL
Sbjct: 122 GDLIEKLKELKELQTMLVEETD-------EDGKQMIKSDINKLKQEEIEPLEKQLLFSLL 174
Query: 198 SGELDPCS-CYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKR 256
G D +E++AG GG+E+ + V +MY+S+ ++G+ ++ E+ G +
Sbjct: 175 PGSKDDAGDAILEIRAGTGGSEAQLFTQDVYEMYRSYCLQKGWTFEPLELSVTEVGGYRD 234
Query: 257 ATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINES 316
T+ V G+ FG+ K E GVHR+ R+ ++ R HTS VA++P D +QI++
Sbjct: 235 VTVSVSGKGVFGFLKYESGVHRVQRVPLTETQGRIHTSTITVAILPEPKD--VDIQIHDR 292
Query: 317 DLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQ 376
DL+++ +RS G GGQ NTTDSAVRI H+PTGIT Q+ERSQHQN++ AM +L++R+ +
Sbjct: 293 DLKVDIYRSSGNGGQSVNTTDSAVRITHLPTGITVAMQDERSQHQNRSKAMKILKARIYE 352
Query: 377 LEIAR-QAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGD-LD 434
E R Q + +E + +IRTY +P + D R + + +S + D LD
Sbjct: 353 RERIRLQNERVSERNAQIGSALRSERIRTYN-YPQDRITDHRVSIN-GNLNSCMNSDGLD 410
Query: 435 GFI 437
FI
Sbjct: 411 SFI 413
>MGI|MGI:1918830 [details] [associations]
symbol:Mtrf1l "mitochondrial translational release factor
1-like" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0003747 "translation release
factor activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IDA] [GO:0006412
"translation" evidence=IEA] [GO:0006415 "translational termination"
evidence=IEA] [GO:0016149 "translation release factor activity,
codon specific" evidence=IEA] InterPro:IPR000352 InterPro:IPR005139
Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745 SMART:SM00937
InterPro:IPR014720 MGI:MGI:1918830 GO:GO:0005739 Gene3D:3.30.160.20
GO:GO:0016149 CTD:54516 eggNOG:COG0216 HOGENOM:HOG000074815
HOVERGEN:HBG017071 KO:K02835 OrthoDB:EOG49W2G0 HSSP:Q9X183
EMBL:AK036424 EMBL:AK078897 IPI:IPI00222491 RefSeq:NP_780583.1
UniGene:Mm.55082 ProteinModelPortal:Q8BJU9 SMR:Q8BJU9 STRING:Q8BJU9
PhosphoSite:Q8BJU9 PRIDE:Q8BJU9 Ensembl:ENSMUST00000019908
GeneID:108853 KEGG:mmu:108853 UCSC:uc007egi.1
GeneTree:ENSGT00390000011879 InParanoid:Q8BJU9 OMA:GEAGGYK
NextBio:361387 Bgee:Q8BJU9 Genevestigator:Q8BJU9 Uniprot:Q8BJU9
Length = 373
Score = 413 (150.4 bits), Expect = 1.3e-38, P = 1.3e-38
Identities = 109/321 (33%), Positives = 166/321 (51%)
Query: 131 AGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTXXXXXXXXXXXTMRRKSKE 190
AG + + L + + E+EL D L +EN+ ++ ++
Sbjct: 47 AGGLDAGYPQLAAAARLLSEKERELR---DTESLLHDENEDLKKLAESEIALCQKQITEL 103
Query: 191 K-ELDALL--SGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEM 247
K ++ +LL S E+D +EV AG GG E+M + S + MY+ +A + + ++
Sbjct: 104 KHQIISLLVPSEEMDGSDLILEVTAGVGGQEAMLFTSEMFDMYQQYAAFKRWHFETLEYF 163
Query: 248 PGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDS 307
P E+ G++ A+ V G A+ + K E GVHR+ R+ + R HTS VA++P +
Sbjct: 164 PSELGGLRHASASVGGPEAYRHMKFEGGVHRVQRVPKTEKQGRIHTSTMTVAILPQP--T 221
Query: 308 STHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAM 367
+ IN DLRI+ R+ GAGGQH NTTDSAVRI+H+PTGI + CQ ERSQ +N+ AM
Sbjct: 222 EIKLVINPKDLRIDTKRASGAGGQHVNTTDSAVRIVHLPTGIISECQQERSQLKNRELAM 281
Query: 368 GVLQSRVNQLEIARQA--QMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDP 425
L++R+ + + + + NA Q T +IRTY P V D R N + D
Sbjct: 282 KKLRARLYSMHLEEETAKRYNARKIQVGTK-GRSEKIRTYNF-PQNRVTDHRINKSLHDL 339
Query: 426 DSVLEGD--LDGFILSYLSAS 444
+S ++GD LD I S S
Sbjct: 340 ESFMQGDCLLDDMIQSLKDCS 360
>UNIPROTKB|F1MCM1 [details] [associations]
symbol:MTRF1L "Peptide chain release factor 1-like,
mitochondrial" species:9913 "Bos taurus" [GO:0005739
"mitochondrion" evidence=IEA] [GO:0016149 "translation release
factor activity, codon specific" evidence=IEA] InterPro:IPR000352
InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745
SMART:SM00937 InterPro:IPR014720 GO:GO:0005739 Gene3D:3.30.160.20
GO:GO:0016149 IPI:IPI00714066 UniGene:Bt.20306
GeneTree:ENSGT00390000011879 OMA:VEIHAND EMBL:DAAA02027199
Ensembl:ENSBTAT00000012219 Uniprot:F1MCM1
Length = 380
Score = 408 (148.7 bits), Expect = 4.3e-38, P = 4.3e-38
Identities = 106/302 (35%), Positives = 160/302 (52%)
Query: 152 EQELLEHIDMIKLAREENDTXXXXXXXXXXXTMRRKSKEKELDALL---SGELDPCSCYI 208
EQEL E ++ +EN+ + ++ K LL S E D +
Sbjct: 75 EQELQETQHLL---HDENEDLRKLAENEITSCEKEIAQLKHQIILLLVPSEETDKNDLIL 131
Query: 209 EVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFG 268
EV AG GG E+M + S + MY+ +A + + ++ P EI G++ A+ + G A+
Sbjct: 132 EVTAGVGGQEAMLFTSEIFDMYQQYAAFKRWHFETLEYFPSEIGGLRHASASIGGSEAYK 191
Query: 269 YAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGA 328
+ K E GVHR+ R+ + R HTS VA++P + ++ IN DLRI+ R+ GA
Sbjct: 192 HMKFEGGVHRVQRVPKTEKQGRIHTSTMTVAILPQP--TEINLVINPKDLRIDTKRASGA 249
Query: 329 GGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQA--QMN 386
GGQH NTTDSAVRI+H+PTGI + CQ ERSQ +NK AM L++++ L++ + + N
Sbjct: 250 GGQHVNTTDSAVRIVHLPTGIVSECQQERSQLKNKEMAMKKLRAKLYSLQLEEETSKRYN 309
Query: 387 AEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASLD 446
A Q T +IRTY P V D R N + D ++ ++G+ ++L L SL
Sbjct: 310 ARKIQIGTK-GRSEKIRTYNF-PQNRVTDHRINKSLHDLETFMQGE---YLLDELVQSL- 363
Query: 447 KD 448
KD
Sbjct: 364 KD 365
>UNIPROTKB|Q2KI15 [details] [associations]
symbol:MTRF1L "Peptide chain release factor 1-like,
mitochondrial" species:9913 "Bos taurus" [GO:0005739
"mitochondrion" evidence=IEA] [GO:0016149 "translation release
factor activity, codon specific" evidence=IEA] InterPro:IPR000352
InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745
SMART:SM00937 InterPro:IPR014720 GO:GO:0005739 Gene3D:3.30.160.20
GO:GO:0016149 EMBL:BC112806 IPI:IPI00714066 RefSeq:NP_001039843.1
UniGene:Bt.20306 ProteinModelPortal:Q2KI15 STRING:Q2KI15
PRIDE:Q2KI15 GeneID:534354 KEGG:bta:534354 CTD:54516 eggNOG:COG0216
HOGENOM:HOG000074815 HOVERGEN:HBG017071 InParanoid:Q2KI15 KO:K02835
OrthoDB:EOG49W2G0 NextBio:20876372 Uniprot:Q2KI15
Length = 380
Score = 408 (148.7 bits), Expect = 4.3e-38, P = 4.3e-38
Identities = 106/302 (35%), Positives = 160/302 (52%)
Query: 152 EQELLEHIDMIKLAREENDTXXXXXXXXXXXTMRRKSKEKELDALL---SGELDPCSCYI 208
EQEL E ++ +EN+ + ++ K LL S E D +
Sbjct: 75 EQELQETQHLL---HDENEDLRKLAENEITSCEKEIAQLKHQIILLLVPSEETDKNDLIL 131
Query: 209 EVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFG 268
EV AG GG E+M + S + MY+ +A + + ++ P EI G++ A+ + G A+
Sbjct: 132 EVTAGVGGQEAMLFTSEIFDMYQQYAAFKRWHFETLEYFPSEIGGLRHASASIGGSEAYK 191
Query: 269 YAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGA 328
+ K E GVHR+ R+ + R HTS VA++P + ++ IN DLRI+ R+ GA
Sbjct: 192 HMKFEGGVHRVQRVPKTEKQGRIHTSTMTVAILPQP--TEINLVINPKDLRIDTKRASGA 249
Query: 329 GGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQA--QMN 386
GGQH NTTDSAVRI+H+PTGI + CQ ERSQ +NK AM L++++ L++ + + N
Sbjct: 250 GGQHVNTTDSAVRIVHLPTGIVSECQQERSQLKNKEMAMKKLRAKLYSLQLEEETSKRYN 309
Query: 387 AEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASLD 446
A Q T +IRTY P V D R N + D ++ ++G+ ++L L SL
Sbjct: 310 ARKIQIGTK-GRSEKIRTYNF-PQNRVTDHRINKSLHDLETFMQGE---YLLDELVQSL- 363
Query: 447 KD 448
KD
Sbjct: 364 KD 365
>TIGR_CMR|APH_0420 [details] [associations]
symbol:APH_0420 "peptide chain release factor 1"
species:212042 "Anaplasma phagocytophilum HZ" [GO:0003747
"translation release factor activity" evidence=ISS] [GO:0006415
"translational termination" evidence=ISS] HAMAP:MF_00093
InterPro:IPR000352 InterPro:IPR004373 InterPro:IPR005139
Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745 SMART:SM00937
InterPro:IPR014720 GO:GO:0005737 Gene3D:3.30.160.20 EMBL:CP000235
GenomeReviews:CP000235_GR GO:GO:0016149 eggNOG:COG0216
HOGENOM:HOG000074815 KO:K02835 RefSeq:YP_505023.1
ProteinModelPortal:Q2GKS8 STRING:Q2GKS8 GeneID:3929978
KEGG:aph:APH_0420 PATRIC:20949454 OMA:EMPEINP ProtClustDB:PRK00591
BioCyc:APHA212042:GHPM-447-MONOMER TIGRFAMs:TIGR00019
Uniprot:Q2GKS8
Length = 359
Score = 408 (148.7 bits), Expect = 4.3e-38, P = 4.3e-38
Identities = 109/340 (32%), Positives = 176/340 (51%)
Query: 105 WKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSL---MGKMKEVKAFEQELLEHIDM 161
++ L + +L +L+ P SRE+ L M +++ K+ ++E+ E ++
Sbjct: 7 FEGLCEKFRILKQQLSAPETLGTQAFVVA-SREYSDLLPIMSLIEKYKSTQKEIAELEEL 65
Query: 162 IKLAREEND--TXXXXXXXXXXXTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTES 219
+ A + + + + + E +L L D + +E++AG GG E+
Sbjct: 66 VNSASTDPELRSLAKDESHIKQKLLPKLRHELQLSLLPKDRDDSRNAILEIRAGTGGEEA 125
Query: 220 MDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRL 279
+ + +MY +A+R+ ++V ++ I G K A+ + G+ F K E GVHR+
Sbjct: 126 ALFVGNLYRMYLKYAERKNWKVETINISTTGIGGYKEASFSIGGKDVFARLKFESGVHRV 185
Query: 280 VRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSA 339
R+ +S R HTS A VAV+P + ++I+E DLRI+ +RS G GGQ NTTDSA
Sbjct: 186 QRVPETESSGRLHTSAATVAVLPEVEE--VDLKIDEKDLRIDVYRSSGPGGQSVNTTDSA 243
Query: 340 VRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIA-RQAQMNAEHTQSLTDISW 398
VRI HIPTGI Q+E+SQH+NK+ A+ VL++R+ LE R+ +++ +
Sbjct: 244 VRITHIPTGIVVIQQDEKSQHKNKSKALKVLRARLYNLEKQKREEEISKMRKSQIGSGDR 303
Query: 399 GNQIRTYVLHPYRMVKDLRTNYEVSDPDSVL-EGDLDGFI 437
+IRTY R + D R N D V+ EGDLD FI
Sbjct: 304 SERIRTYNFLQSR-ITDHRINLTSYRLDYVMKEGDLDEFI 342
>TIGR_CMR|BA_5572 [details] [associations]
symbol:BA_5572 "peptide chain release factor 1"
species:198094 "Bacillus anthracis str. Ames" [GO:0003747
"translation release factor activity" evidence=ISS] [GO:0006415
"translational termination" evidence=ISS] HAMAP:MF_00093
InterPro:IPR000352 InterPro:IPR004373 InterPro:IPR005139
Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745 SMART:SM00937
InterPro:IPR014720 GO:GO:0005737 EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR Gene3D:3.30.160.20 GO:GO:0016149
eggNOG:COG0216 HOGENOM:HOG000074815 KO:K02835 OMA:EMPEINP
ProtClustDB:PRK00591 TIGRFAMs:TIGR00019 RefSeq:NP_847729.1
RefSeq:YP_022240.1 RefSeq:YP_031417.1 ProteinModelPortal:Q81JX1
SMR:Q81JX1 DNASU:1085262 EnsemblBacteria:EBBACT00000012375
EnsemblBacteria:EBBACT00000014683 EnsemblBacteria:EBBACT00000022198
GeneID:1085262 GeneID:2819896 GeneID:2852042 KEGG:ban:BA_5572
KEGG:bar:GBAA_5572 KEGG:bat:BAS5178
BioCyc:BANT260799:GJAJ-5253-MONOMER
BioCyc:BANT261594:GJ7F-5432-MONOMER Uniprot:Q81JX1
Length = 355
Score = 407 (148.3 bits), Expect = 5.5e-38, P = 5.5e-38
Identities = 100/307 (32%), Positives = 165/307 (53%)
Query: 134 ISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTXXXXXXXXXXXTMRRKSKEKEL 193
+ RE+ + ++K+ KA ++ L+ +M ++ +EE + K+ + L
Sbjct: 47 VYREYKDVREQLKDAKAMLEDKLD-AEMREMVKEE----------VSELESQEKTLSERL 95
Query: 194 DALL--SGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEI 251
LL D + +EV+ AGG E+ +A + +MY +A+ +G++ +++ E+
Sbjct: 96 KILLVPKDPNDDKNVIVEVRGAAGGDEAALFAGDLYRMYSRYAEVQGWKTEIIEASYTEL 155
Query: 252 AGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHV 311
G K ++G+ AF K E G HR+ R+ +SG R HTS A VAV+P + + +
Sbjct: 156 GGYKEIIFMINGKGAFAKLKFENGAHRVQRVPETESGGRIHTSTATVAVLPEAEE--VEI 213
Query: 312 QINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQ 371
I+E D+R++ F S G GGQ NTT SAVR+ H+PTG+ +CQ+E+SQ +NK AM VL+
Sbjct: 214 DIHEKDVRVDTFASSGPGGQSVNTTMSAVRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLR 273
Query: 372 SRV-NQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLE 430
+RV ++ QA+ + Q++ +IRTY P V D R + D +L+
Sbjct: 274 ARVYDKFRQEAQAEYDQNRKQAVGTGDRSERIRTYNF-PQNRVTDHRIGLTIQKLDQILQ 332
Query: 431 GDLDGFI 437
G LD FI
Sbjct: 333 GKLDDFI 339
>TIGR_CMR|NSE_0406 [details] [associations]
symbol:NSE_0406 "peptide chain release factor 1"
species:222891 "Neorickettsia sennetsu str. Miyayama" [GO:0003747
"translation release factor activity" evidence=ISS] [GO:0006415
"translational termination" evidence=ISS] HAMAP:MF_00093
InterPro:IPR000352 InterPro:IPR004373 InterPro:IPR005139
Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745 SMART:SM00937
InterPro:IPR014720 GO:GO:0005737 Gene3D:3.30.160.20 EMBL:CP000237
GenomeReviews:CP000237_GR GO:GO:0016149 eggNOG:COG0216
HOGENOM:HOG000074815 KO:K02835 TIGRFAMs:TIGR00019 OMA:SVMLEIR
RefSeq:YP_506293.1 ProteinModelPortal:Q2GE03 SMR:Q2GE03
STRING:Q2GE03 GeneID:3931950 KEGG:nse:NSE_0406 PATRIC:22680869
ProtClustDB:CLSK2527657 BioCyc:NSEN222891:GHFU-429-MONOMER
Uniprot:Q2GE03
Length = 367
Score = 403 (146.9 bits), Expect = 1.5e-37, P = 1.5e-37
Identities = 104/314 (33%), Positives = 168/314 (53%)
Query: 133 RISREHGSLMGKMKEVKAFEQ--ELLEHIDM-IKLAREENDTXXXXXXXXXXXTMRRKSK 189
++S+E+ L K++ + +++ E ++++ +K E+ +
Sbjct: 35 KLSKEYAELKPKVELIARYKKLKEEQAYLELLVKNPLEDQEIREIGKSDLQAIQDVIPKL 94
Query: 190 EKELDALL--SGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEM 247
E E+ +L + D + +EV+AG GG E+ +A+ + MY+ +A+R +R ++
Sbjct: 95 ELEIKRMLLPKDKDDALNVMLEVRAGTGGDEAALFAASLFHMYQKYAERMKWRFEIISIS 154
Query: 248 PGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDS 307
EI G K A + G F K E GVHR+ R+ +S R HTS A VAV+P D
Sbjct: 155 HNEIGGYKEANASISGSDVFAKLKFESGVHRVQRVPETESAGRIHTSTATVAVLPEPED- 213
Query: 308 STHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAM 367
V+IN+ DLRI+ +RS G GGQ NTTDSAVRI HIPTGI Q+E+SQH+N+A AM
Sbjct: 214 -VDVKINDKDLRIDVYRSSGPGGQSVNTTDSAVRITHIPTGIVVIQQDEKSQHKNRAKAM 272
Query: 368 GVLQSRVNQLEIAR-QAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTN---YEVS 423
VL+ R+ ++E + Q ++++ + + RTY P + D R N Y ++
Sbjct: 273 KVLRVRLYEIERNKVQQEISSMRKSQIGSGERSEKTRTYNF-PQGRITDHRINLTTYRIN 331
Query: 424 DPDSVLEGDLDGFI 437
+ +V EG+L+ I
Sbjct: 332 E--TVKEGELEPII 343
>UNIPROTKB|Q9UGC7 [details] [associations]
symbol:MTRF1L "Peptide chain release factor 1-like,
mitochondrial" species:9606 "Homo sapiens" [GO:0016149 "translation
release factor activity, codon specific" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] InterPro:IPR000352 InterPro:IPR005139
Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745 SMART:SM00937
InterPro:IPR014720 GO:GO:0005739 EMBL:CH471051 Gene3D:3.30.160.20
GO:GO:0016149 EMBL:AL080276 CTD:54516 eggNOG:COG0216
HOVERGEN:HBG017071 KO:K02835 OrthoDB:EOG49W2G0 EMBL:AK027684
EMBL:AK095240 EMBL:AK290662 EMBL:BC011873 EMBL:BC014428
EMBL:BC105973 IPI:IPI00295737 IPI:IPI00477207 IPI:IPI00513970
IPI:IPI00890825 RefSeq:NP_001107656.1 RefSeq:NP_061914.3
UniGene:Hs.225836 HSSP:Q9X183 ProteinModelPortal:Q9UGC7 SMR:Q9UGC7
STRING:Q9UGC7 PhosphoSite:Q9UGC7 DMDM:74753314 PRIDE:Q9UGC7
DNASU:54516 Ensembl:ENST00000367230 Ensembl:ENST00000367231
Ensembl:ENST00000367233 Ensembl:ENST00000414771 GeneID:54516
KEGG:hsa:54516 UCSC:uc003qpi.4 UCSC:uc003qpk.4 UCSC:uc003qpl.4
GeneCards:GC06M153308 H-InvDB:HIX0006308 HGNC:HGNC:21051
HPA:HPA036367 MIM:613542 neXtProt:NX_Q9UGC7 PharmGKB:PA134870441
InParanoid:Q9UGC7 OMA:YSMKLEE PhylomeDB:Q9UGC7 GenomeRNAi:54516
NextBio:56904 ArrayExpress:Q9UGC7 Bgee:Q9UGC7 CleanEx:HS_MTRF1L
Genevestigator:Q9UGC7 Uniprot:Q9UGC7
Length = 380
Score = 401 (146.2 bits), Expect = 2.4e-37, P = 2.4e-37
Identities = 102/310 (32%), Positives = 162/310 (52%)
Query: 141 LMGKMKEVKAFEQELLEHIDMIKLAREENDTXXXXXXXXXXXTMRRKSKEKELDALL--- 197
L+ +K + E+EL E ++ +EN+ + ++ K LL
Sbjct: 64 LLAVIKLLNEKERELRETEHLL---HDENEDLRKLAENEITLCQKEITQLKHQIILLLVP 120
Query: 198 SGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRA 257
S E D +EV AG GG E+M + S + MY+ +A + + ++ P E+ G++ A
Sbjct: 121 SEETDENDLILEVTAGVGGQEAMLFTSEIFDMYQQYAAFKRWHFETLEYFPSELGGLRHA 180
Query: 258 TIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESD 317
+ + G A+ + K E GVHR+ R+ + R HTS VA++P + ++ IN D
Sbjct: 181 SASIGGSEAYRHMKFEGGVHRVQRVPKTEKQGRVHTSTMTVAILPQP--TEINLVINPKD 238
Query: 318 LRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQL 377
LRI+ R+ GAGGQH NTTDSAVRI+H+PTG+ + CQ ERSQ +NK AM L++++ +
Sbjct: 239 LRIDTKRASGAGGQHVNTTDSAVRIVHLPTGVVSECQQERSQLKNKELAMTKLRAKLYSM 298
Query: 378 EIARQA--QMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDG 435
+ + + NA Q + +IRTY P V D R N + D ++ ++GD
Sbjct: 299 HLEEEINKRQNARKIQ-IGSKGRSEKIRTYNF-PQNRVTDHRINKTLHDLETFMQGD--- 353
Query: 436 FILSYLSASL 445
++L L SL
Sbjct: 354 YLLDELVQSL 363
>UNIPROTKB|F1S7X5 [details] [associations]
symbol:MTRF1L "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0016149
"translation release factor activity, codon specific" evidence=IEA]
InterPro:IPR000352 InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462
PROSITE:PS00745 SMART:SM00937 InterPro:IPR014720 GO:GO:0005739
Gene3D:3.30.160.20 GO:GO:0016149 GeneTree:ENSGT00390000011879
OMA:GEAGGYK EMBL:CU633523 Ensembl:ENSSSCT00000004505 Uniprot:F1S7X5
Length = 380
Score = 401 (146.2 bits), Expect = 2.4e-37, P = 2.4e-37
Identities = 103/302 (34%), Positives = 160/302 (52%)
Query: 152 EQELLEHIDMIKLAREENDTXXXXXXXXXXXTMRRKSKEKELDALL---SGELDPCSCYI 208
E+ELLE ++ +E++ + ++ K LL S E D +
Sbjct: 75 ERELLETEHLL---HDESEDLRKLAENEIISCQKEIAQLKHQIVLLLVPSEEADENDLIL 131
Query: 209 EVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFG 268
EV AG GG E+M + S + MY+ +A + + +++ P EI G++ A+ + G A+
Sbjct: 132 EVTAGVGGQEAMLFTSEIFDMYQQYAAFKRWHFEILEYFPSEIGGLRHASASIGGSEAYK 191
Query: 269 YAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGA 328
+ K E GVHR+ R+ + R HTS VA++P + ++ IN DLRI+ R+ GA
Sbjct: 192 HMKFEGGVHRVQRVPKTEKQGRIHTSTMTVAILPQP--TEINLVINPKDLRIDTKRASGA 249
Query: 329 GGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQA--QMN 386
GGQH NTTDSAVRI+H+PTG+ + CQ ERSQ +N+ AM L++++ L + + + N
Sbjct: 250 GGQHVNTTDSAVRIVHLPTGVVSECQQERSQLKNREMAMKKLRAKLYSLHLEEETSKRYN 309
Query: 387 AEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASLD 446
A Q T +IRTY P V D R N + D + ++G+ ++L L SL
Sbjct: 310 ARKVQVGTK-GRSEKIRTYNF-PQNRVTDHRINKSLYDLGTFMQGE---YLLDELVQSL- 363
Query: 447 KD 448
KD
Sbjct: 364 KD 365
>RGD|1598312 [details] [associations]
symbol:Mtrf1l "mitochondrial translational release factor
1-like" species:10116 "Rattus norvegicus" [GO:0005739
"mitochondrion" evidence=IEA;ISO] [GO:0016149 "translation release
factor activity, codon specific" evidence=IEA] InterPro:IPR000352
InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745
SMART:SM00937 InterPro:IPR014720 RGD:1598312 GO:GO:0005739
Gene3D:3.30.160.20 GO:GO:0016149 CTD:54516 eggNOG:COG0216
HOGENOM:HOG000074815 HOVERGEN:HBG017071 KO:K02835 OrthoDB:EOG49W2G0
HSSP:Q9X183 GeneTree:ENSGT00390000011879 OMA:GEAGGYK EMBL:BC097970
IPI:IPI00365406 RefSeq:NP_001020894.1 UniGene:Rn.205194
ProteinModelPortal:Q4V7E5 STRING:Q4V7E5 PRIDE:Q4V7E5
Ensembl:ENSRNOT00000025398 GeneID:361473 KEGG:rno:361473
UCSC:RGD:1598312 InParanoid:Q4V7E5 NextBio:676427
Genevestigator:Q4V7E5 Uniprot:Q4V7E5
Length = 373
Score = 396 (144.5 bits), Expect = 8.0e-37, P = 8.0e-37
Identities = 106/318 (33%), Positives = 163/318 (51%)
Query: 133 RISREHGSLMGKMKEVKAFEQELLEHI----DMIKLAREENDTXXXXXXXXXXXTMRRKS 188
R+ E G L ++ A + L E D L +EN+ + +
Sbjct: 42 RVGSEAGGLDAGSPQLAAAARLLNEKERELRDTESLLHDENEDLKKLAESEIALCQKEIA 101
Query: 189 KEKE-LDALL--SGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMD 245
+ K + +LL S ++D +EV AG GG E+M + S + MY+ +A + + ++
Sbjct: 102 ELKHRIISLLVPSEDMDGSDLILEVTAGVGGQEAMLFTSEMFDMYQQYAAFKRWHFETLE 161
Query: 246 EMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSG 305
P E+ G++ A+ + G A+ + K E GVHR+ R+ + R HTS VA++P
Sbjct: 162 YFPSELGGLRHASASIGGPEAYRHMKFEGGVHRVQRVPKTERQGRIHTSTMTVAILPQP- 220
Query: 306 DSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKAS 365
+ + IN DLRI+ R+ GAGGQH NTTDSAVRI+H+PTGI + CQ ERSQ +N+
Sbjct: 221 -TEIKLVINPKDLRIDTKRASGAGGQHVNTTDSAVRIVHLPTGIISECQQERSQLKNREL 279
Query: 366 AMGVLQSRVNQLEIARQA--QMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVS 423
AM L++R+ + + + + +A Q T +IRTY P V D R N +
Sbjct: 280 AMKKLRARLYSMRLEEETAKRYSARKIQVGTK-GRSEKIRTYNF-PQNRVTDHRINKSLH 337
Query: 424 DPDSVLEGD--LDGFILS 439
D +S ++GD LD I S
Sbjct: 338 DLESFMQGDCLLDDLIQS 355
>UNIPROTKB|F1NW58 [details] [associations]
symbol:MTRF1L "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0016149 "translation release factor activity,
codon specific" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] InterPro:IPR000352 InterPro:IPR005139 Pfam:PF00472
Pfam:PF03462 PROSITE:PS00745 SMART:SM00937 InterPro:IPR014720
GO:GO:0005739 Gene3D:3.30.160.20 GO:GO:0016149 OMA:YSMKLEE
GeneTree:ENSGT00390000011879 EMBL:AADN02025387 EMBL:AADN02025388
IPI:IPI00593690 Ensembl:ENSGALT00000022140 Uniprot:F1NW58
Length = 367
Score = 395 (144.1 bits), Expect = 1.0e-36, P = 1.0e-36
Identities = 90/243 (37%), Positives = 136/243 (55%)
Query: 198 SGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRA 257
S E D +EV AG GG E+M + S + MY+ +A + ++ +++ P EI G++ A
Sbjct: 107 SEETDNSDLVMEVTAGVGGQEAMLFTSEIFDMYRRYAAYKKWKFEILEYFPSEIGGLRHA 166
Query: 258 TIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESD 317
+ G A+ Y K E GVHR+ R+ + R HTS VA++P + ++IN D
Sbjct: 167 VASIAGLDAYKYMKFEGGVHRVQRVPKTEKQGRIHTSTMTVAILPQP--TEMELKINPKD 224
Query: 318 LRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQL 377
LRIE R+ GAGGQH NTTDSAVRI+HIPTG+T+ CQ ERSQ +NK AM +L +++ +
Sbjct: 225 LRIETKRASGAGGQHVNTTDSAVRIVHIPTGVTSECQQERSQIRNKEKAMQMLCAKLYNI 284
Query: 378 EIARQ-AQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGD--LD 434
++ + + N+ + +IRTY P + D R + V + + G+ LD
Sbjct: 285 KLEEENKKRNSARKIQIGTKGRSEKIRTYNF-PQDRITDHRISRSVHHTECFMLGEEMLD 343
Query: 435 GFI 437
I
Sbjct: 344 EMI 346
>TIGR_CMR|CJE_1784 [details] [associations]
symbol:CJE_1784 "peptide chain release factor 1"
species:195099 "Campylobacter jejuni RM1221" [GO:0003747
"translation release factor activity" evidence=ISS] [GO:0006415
"translational termination" evidence=ISS] HAMAP:MF_00093
InterPro:IPR000352 InterPro:IPR004373 InterPro:IPR005139
Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745 SMART:SM00937
InterPro:IPR014720 GO:GO:0005737 Gene3D:3.30.160.20 EMBL:CP000025
GenomeReviews:CP000025_GR GO:GO:0016149 eggNOG:COG0216
HOGENOM:HOG000074815 KO:K02835 OMA:EMPEINP ProtClustDB:PRK00591
TIGRFAMs:TIGR00019 RefSeq:YP_179756.1 ProteinModelPortal:Q5HSH9
SMR:Q5HSH9 STRING:Q5HSH9 GeneID:3232411 KEGG:cjr:CJE1784
PATRIC:20045378 BioCyc:CJEJ195099:GJC0-1814-MONOMER Uniprot:Q5HSH9
Length = 355
Score = 391 (142.7 bits), Expect = 2.7e-36, P = 2.7e-36
Identities = 104/328 (31%), Positives = 172/328 (52%)
Query: 111 RLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREEND 170
R L++ L+ ++ +D +S+E +L + + K + + L++I+ K ND
Sbjct: 12 RFEELNSLLSSSDIINDISKMTTLSKEQKNLEPIVLKAKEY-LKTLDNIEENKALL--ND 68
Query: 171 TXXXXXXXXXXXTMRR-KSK-EKELDALL--SGELDPCSCYIEVQAGAGGTESMDWASMV 226
T+ K K E+E+ LL D + ++E++AGAGG E+ + +
Sbjct: 69 PELGELAKEELKTLEELKPKLEEEIKILLLPKDPNDERNIFLEIRAGAGGDEASLFVGDL 128
Query: 227 LQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFD 286
++ Y +A+ RGY++ ++ G + G K + V G A+ K E G HR+ R+ +
Sbjct: 129 VKAYARYAENRGYKLEIVSSSEGSVGGFKEIIMLVKGTGAYSRLKYEGGTHRVQRVPQTE 188
Query: 287 SGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIP 346
S R HTS VAV+P D ++IN +DL+++ RS G GGQ NTTDSAVRI HIP
Sbjct: 189 SQGRVHTSAITVAVMPEVDD--IEIEINPNDLKVDVMRSSGHGGQSVNTTDSAVRITHIP 246
Query: 347 TGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDIS-WGNQIRTY 405
TGI Q+ +SQH+NK SAM VL++R+ +++ + + +E +S +IRTY
Sbjct: 247 TGIVVVNQDGKSQHKNKESAMKVLKARLYEMQESERLAKESEARKSQVGSGDRSERIRTY 306
Query: 406 VLHPYRMVKDLRTNYEVSDPDSVLEGDL 433
P + D R N + D++++ L
Sbjct: 307 NF-PQNRISDHRINLTLYRLDAIMQDGL 333
>TIGR_CMR|DET_1210 [details] [associations]
symbol:DET_1210 "peptide chain release factor 1"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0003747
"translation release factor activity" evidence=ISS] [GO:0006415
"translational termination" evidence=ISS] HAMAP:MF_00093
InterPro:IPR000352 InterPro:IPR004373 InterPro:IPR005139
Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745 SMART:SM00937
InterPro:IPR014720 GO:GO:0005737 Gene3D:3.30.160.20 EMBL:CP000027
GenomeReviews:CP000027_GR GO:GO:0016149 eggNOG:COG0216
HOGENOM:HOG000074815 KO:K02835 HSSP:P0A7I0 ProtClustDB:PRK00591
TIGRFAMs:TIGR00019 RefSeq:YP_181923.1 ProteinModelPortal:Q3Z776
STRING:Q3Z776 GeneID:3229489 KEGG:det:DET1210 PATRIC:21609455
OMA:SVMLEIR BioCyc:DETH243164:GJNF-1211-MONOMER Uniprot:Q3Z776
Length = 355
Score = 391 (142.7 bits), Expect = 2.7e-36, P = 2.7e-36
Identities = 104/341 (30%), Positives = 178/341 (52%)
Query: 106 KNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKM---KEVKAFEQELLEHIDMI 162
+N R + E++KP + +D +++E L K+ + KA +EL + +++
Sbjct: 6 ENCEKRFREIEEEISKPEVINDARLVRTLAQERADLQTKVEMYRRYKAISKELEDTKNLL 65
Query: 163 KLAREEN-DTXXXXXXXXXXXTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMD 221
++ ++E+ +M + L+ L D S +E++AG GG E+
Sbjct: 66 EIEKDEDMKDMVRGEIASLEKSMADLYTQMTLELLPKDPNDDKSIIMEIRAGTGGDEAGL 125
Query: 222 WASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGI-KRATIKVDGEYAFGYAKAEVGVHRLV 280
+A+ + +MY +A + ++ ++D + G +AGI K +V+G+ AF K E GVHR+
Sbjct: 126 FAADLYKMYTRYALLKNWKTEVID-INGNVAGIIKEVVFEVNGKGAFSRLKYERGVHRVQ 184
Query: 281 RISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAV 340
R+ ++ R HTS A VAV+P + + IN D+R++ F S GAGGQ+ +A+
Sbjct: 185 RVPQTEASGRIHTSTATVAVLPQVEE--VDIDINMDDVRVDIFHSSGAGGQNVQKVATAI 242
Query: 341 RIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQS----LTDI 396
R+ HIPTG+ CQ+ERSQ +NK A VL++R+ +LE Q++++ E T+S +
Sbjct: 243 RLTHIPTGLVVCCQDERSQLKNKNKAFAVLRARLMELE---QSKVDEERTESRRAQVGQA 299
Query: 397 SWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFI 437
+IRTY P + D R + +LEG LD I
Sbjct: 300 DRSEKIRTYNF-PQDRLTDHRIGLTAHNLPHILEGYLDEII 339
>UNIPROTKB|E2QTM1 [details] [associations]
symbol:MTRF1L "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0016149 "translation release factor activity, codon specific"
evidence=IEA] InterPro:IPR000352 InterPro:IPR005139 Pfam:PF00472
Pfam:PF03462 PROSITE:PS00745 SMART:SM00937 InterPro:IPR014720
GO:GO:0005739 Gene3D:3.30.160.20 GO:GO:0016149
Ensembl:ENSCAFT00000000841 Uniprot:E2QTM1
Length = 381
Score = 387 (141.3 bits), Expect = 7.2e-36, P = 7.2e-36
Identities = 103/303 (33%), Positives = 159/303 (52%)
Query: 152 EQELLEHIDMIKLAREENDTXXXXXXXXXXXTMRRKSKEKELDALL----SGELDPCSCY 207
E+EL E +L R+EN+ + +R L +L S E D
Sbjct: 75 ERELQE---TEQLLRDENEDLRKLAENEMTSSSKRGVIFLYLQIILLLVPSEETDKNDLI 131
Query: 208 IEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAF 267
+EV AG GG E+M + S + MY+ +A + + ++ P EI G++ A+ + G A+
Sbjct: 132 LEVTAGVGGQEAMLFTSEMFDMYQQYAAFKRWHFETLEYFPSEIGGLRHASASIGGLEAY 191
Query: 268 GYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGG 327
+ K E GVHR+ R+ + R HTS VA++P + ++ IN DLRI R+ G
Sbjct: 192 KHMKFEGGVHRVQRVPKTEKQGRIHTSTMTVAILPQP--TEINLVINPKDLRIHTKRASG 249
Query: 328 AGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQA--QM 385
AGGQH NTTDSAVRI+H+PTG+ + CQ ERSQ +N+ AM L++++ + + + +
Sbjct: 250 AGGQHVNTTDSAVRIVHLPTGVVSECQQERSQLKNREMAMKKLRAKLYSMYLEEETSKRY 309
Query: 386 NAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
+A Q T +IRTY P V D R N + D ++ ++G+ ++L L SL
Sbjct: 310 SARKIQVGTK-GRSEKIRTYNF-PQNRVTDHRINKSLHDLETFMQGE---YLLDELVQSL 364
Query: 446 DKD 448
KD
Sbjct: 365 -KD 366
>TIGR_CMR|ECH_0597 [details] [associations]
symbol:ECH_0597 "peptide chain release factor 1"
species:205920 "Ehrlichia chaffeensis str. Arkansas" [GO:0003747
"translation release factor activity" evidence=ISS] [GO:0006415
"translational termination" evidence=ISS] HAMAP:MF_00093
InterPro:IPR000352 InterPro:IPR004373 InterPro:IPR005139
Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745 SMART:SM00937
InterPro:IPR014720 GO:GO:0005737 EMBL:CP000236
GenomeReviews:CP000236_GR Gene3D:3.30.160.20 GO:GO:0016149
eggNOG:COG0216 HOGENOM:HOG000074815 KO:K02835 OMA:EMPEINP
ProtClustDB:PRK00591 TIGRFAMs:TIGR00019 RefSeq:YP_507408.1
ProteinModelPortal:Q2GGM5 SMR:Q2GGM5 STRING:Q2GGM5 GeneID:3927422
KEGG:ech:ECH_0597 PATRIC:20576648
BioCyc:ECHA205920:GJNR-599-MONOMER Uniprot:Q2GGM5
Length = 359
Score = 384 (140.2 bits), Expect = 1.5e-35, P = 1.5e-35
Identities = 92/254 (36%), Positives = 144/254 (56%)
Query: 187 KSKEK-ELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMD 245
K K K +L L + D + +E++AG GG E+ + + + +MY +A+++ ++ ++
Sbjct: 92 KVKHKLKLSLLPKDKDDARNAILEIRAGTGGEEAALFVTDLYRMYTKYAEQKNWKFEQIN 151
Query: 246 EMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSG 305
I G K ++ + G F K E GVHR+ R+ ++ R HTS A VAV+P
Sbjct: 152 SSSTGIGGHKEISLCISGSNVFARLKFESGVHRVQRVPETEASGRLHTSAATVAVLPEIE 211
Query: 306 DSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKAS 365
+ ++I+E DLRI+ +RS G GGQ NTTDSAVRI HIP+GI Q+E+SQH+NK+
Sbjct: 212 E--VDLKIDEKDLRIDVYRSSGPGGQSVNTTDSAVRITHIPSGIVVIQQDEKSQHKNKSK 269
Query: 366 AMGVLQSRVNQLEIA-RQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSD 424
A+ VL++R+ LE R A+++ + +IRTY P + D R N +
Sbjct: 270 ALKVLRARLYNLEKQKRDAEISQMRKSQIGSGDRSERIRTYNF-PQSRITDHRINLTLYR 328
Query: 425 PDSVL-EGDLDGFI 437
D ++ EG+LD FI
Sbjct: 329 LDDIMKEGNLDEFI 342
>ZFIN|ZDB-GENE-030131-8198 [details] [associations]
symbol:mtrf1l "mitochondrial translational release
factor 1-like" species:7955 "Danio rerio" [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016149 "translation release factor activity,
codon specific" evidence=IEA] [GO:0006415 "translational
termination" evidence=IEA] [GO:0003747 "translation release factor
activity" evidence=IEA] InterPro:IPR000352 InterPro:IPR005139
Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745 SMART:SM00937
InterPro:IPR014720 ZFIN:ZDB-GENE-030131-8198 GO:GO:0005737
Gene3D:3.30.160.20 GO:GO:0016149 GeneTree:ENSGT00390000011879
EMBL:CU651596 IPI:IPI00802409 Ensembl:ENSDART00000084094
Uniprot:F1QA94
Length = 339
Score = 382 (139.5 bits), Expect = 2.4e-35, P = 2.4e-35
Identities = 102/294 (34%), Positives = 155/294 (52%)
Query: 144 KMKEVKAFEQELLEHID--MIKLAREENDTXXXXXXXXXXXTMRRKSKEKELDALL-SGE 200
K KE++ Q+LL+ D +++LA E + + ++K L L+ E
Sbjct: 33 KQKEMEDM-QDLLKDNDPELLELAETEKEAVLADI---------QDLRQKILSLLIPEEE 82
Query: 201 LDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIK 260
D +EV AG GG E+M + + + +MY+++A G+ +++ E+ G++ A+
Sbjct: 83 SDMSELVLEVSAGVGGQEAMLFTAEIFEMYQNYAAFNGWSFDVLEANASELGGVRHASAS 142
Query: 261 VDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRI 320
V G ++ K E GVHR+ R+ +S R HTS VA++P + S IN DL+I
Sbjct: 143 VSGPLSYKKLKFEAGVHRVQRVPKTESKGRTHTSTMTVAILPQPTEIS--FTINPKDLKI 200
Query: 321 ERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVN--QLE 378
E R+ GAGGQH NTTDSAVRI H+PTG A CQ ERSQ +NK +AM +L++++ +LE
Sbjct: 201 ETKRASGAGGQHVNTTDSAVRITHLPTGTVAECQQERSQIKNKDTAMKLLRAKLYSARLE 260
Query: 379 IARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGD 432
+ A Q T +IRTY R + D R V D L+G+
Sbjct: 261 EETSRRYQARKLQIGTR-GRSEKIRTYNFQQDR-ITDHRIGKTVHDVHGFLQGE 312
>FB|FBgn0032486 [details] [associations]
symbol:CG5705 species:7227 "Drosophila melanogaster"
[GO:0005739 "mitochondrion" evidence=ISS] [GO:0006415
"translational termination" evidence=ISS] [GO:0016149 "translation
release factor activity, codon specific" evidence=ISS]
InterPro:IPR000352 InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462
PROSITE:PS00745 SMART:SM00937 InterPro:IPR014720 GO:GO:0005737
EMBL:AE014134 Gene3D:3.30.160.20 GO:GO:0016149 eggNOG:COG0216
KO:K02835 GeneTree:ENSGT00390000011879 HSSP:P07012 EMBL:AY061245
RefSeq:NP_609617.1 UniGene:Dm.3674 SMR:Q9VK20 IntAct:Q9VK20
MINT:MINT-821247 STRING:Q9VK20 EnsemblMetazoa:FBtr0080444
GeneID:34720 KEGG:dme:Dmel_CG5705 UCSC:CG5705-RA
FlyBase:FBgn0032486 InParanoid:Q9VK20 OMA:AEKDEDM OrthoDB:EOG46WWQX
GenomeRNAi:34720 NextBio:789875 Uniprot:Q9VK20
Length = 392
Score = 381 (139.2 bits), Expect = 3.1e-35, P = 3.1e-35
Identities = 104/302 (34%), Positives = 157/302 (51%)
Query: 150 AFEQELLEHIDMIKLAREENDTXXXXXXXXXXXTMRRKSKEKELDALLSGELDPCSCYIE 209
A + E + DM +L REEN+ ++ EL L E P +
Sbjct: 82 AKDMEAEKDEDMRELMREENEVYVDLLGKQDQALLQ------ELLTLSDDEEYPALIF-G 134
Query: 210 VQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGY 269
+ AGAGG E+M +A + +MY + + G+ +I G++ A++ V GE AF +
Sbjct: 135 LNAGAGGQEAMLFAQELYEMYTGYFEHMGWEWEEFASEGTDIGGLRHASLMVSGEDAFRW 194
Query: 270 AKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAG 329
+ E GVHR+ R+ + R HTS A++ VIP D H+ E DL+IE R+ GAG
Sbjct: 195 LRYEAGVHRVQRVPATEKSGRMHTSTASITVIPRPADIQVHIA--EKDLKIETKRASGAG 252
Query: 330 GQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRV--NQLEIARQAQMNA 387
GQH NTTDSAVRI+H+PTG+ Q+ERSQ +N+ AM L+SR+ QLE ++M
Sbjct: 253 GQHVNTTDSAVRIVHLPTGLAVEAQSERSQLKNRELAMKRLRSRLVQQQLESVEASKMAT 312
Query: 388 EHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILS--YLSASL 445
+ Q ++ +IRTY V+D T++ + L +L+GF+ LS +
Sbjct: 313 KKAQQ-GSLNRNEKIRTY-----NFVQDRITDHRIQG--GTLH-NLNGFLKGGDQLSGLI 363
Query: 446 DK 447
+K
Sbjct: 364 EK 365
>GENEDB_PFALCIPARUM|MAL7P1.20 [details] [associations]
symbol:MAL7P1.20 "peptide chain release factor,
putative" species:5833 "Plasmodium falciparum" [GO:0020011
"apicoplast" evidence=RCA] InterPro:IPR000352 InterPro:IPR004374
InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745
SMART:SM00937 InterPro:IPR014720 GO:GO:0005737 Gene3D:3.30.160.20
EMBL:AL844506 GO:GO:0016149 HOGENOM:HOG000074814
PANTHER:PTHR11075:SF6 RefSeq:XP_001348982.1 HSSP:P07012
ProteinModelPortal:Q8IC21 IntAct:Q8IC21 MINT:MINT-1551615
EnsemblProtists:MAL7P1.20:mRNA GeneID:2655192 KEGG:pfa:MAL7P1.20
EuPathDB:PlasmoDB:PF3D7_0704900 ProtClustDB:CLSZ2434502
Uniprot:Q8IC21
Length = 352
Score = 235 (87.8 bits), Expect = 2.3e-34, Sum P(2) = 2.3e-34
Identities = 58/143 (40%), Positives = 89/143 (62%)
Query: 303 NSGDSSTH-VQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQ 361
N G++ + IN+SDL I+ RSGG GGQ+ N ++AVRI+H PT I+ +ER+Q
Sbjct: 210 NGGNNKMNDFVINKSDLVIQTMRSGGKGGQNVNKVETAVRILHKPTNISVKASSERTQLL 269
Query: 362 NKASAMGVLQSRVNQLEIARQAQMNAEH---TQSLTDISWGNQIRTYVLHPYRMVKDLRT 418
NK +A+ + ++ L + +A N ++ +SLT +G QIR YVL+ +M+KD RT
Sbjct: 270 NKRNALKRIYEKL--LYLQTEALKNKKYELANKSLTH--FGEQIRNYVLYGNKMIKDTRT 325
Query: 419 NYEVSDPDSVL-EGDLDGFILSY 440
N +D D VL +G++D FI +Y
Sbjct: 326 NVFSTDIDKVLYQGEIDIFIDAY 348
Score = 193 (73.0 bits), Expect = 2.3e-34, Sum P(2) = 2.3e-34
Identities = 44/114 (38%), Positives = 68/114 (59%)
Query: 205 SCYIEVQAGAGGTESMDWASMVLQMYKSWA----QRRGYRVTLMDEMPGEIAGIKRATIK 260
SC + + +G GGTE+ D+ +M+ MY + R+ + ++D E+ GIK+ IK
Sbjct: 51 SCSLILSSGTGGTEACDFCNMLYNMYIKYLCRIKNRKNIKYEVIDISKNEV-GIKKVEIK 109
Query: 261 VDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQIN 314
+DGEY+F +E G+HRLVR SPF++ ++ TSF V VIP + +V IN
Sbjct: 110 IDGEYSFYNFVSEKGIHRLVRNSPFNAQNKKMTSFVKVDVIPTLNFNDLNV-IN 162
>UNIPROTKB|Q8IC21 [details] [associations]
symbol:MAL7P1.20 "Peptide chain release factor, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0020011 "apicoplast"
evidence=RCA] InterPro:IPR000352 InterPro:IPR004374
InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745
SMART:SM00937 InterPro:IPR014720 GO:GO:0005737 Gene3D:3.30.160.20
EMBL:AL844506 GO:GO:0016149 HOGENOM:HOG000074814
PANTHER:PTHR11075:SF6 RefSeq:XP_001348982.1 HSSP:P07012
ProteinModelPortal:Q8IC21 IntAct:Q8IC21 MINT:MINT-1551615
EnsemblProtists:MAL7P1.20:mRNA GeneID:2655192 KEGG:pfa:MAL7P1.20
EuPathDB:PlasmoDB:PF3D7_0704900 ProtClustDB:CLSZ2434502
Uniprot:Q8IC21
Length = 352
Score = 235 (87.8 bits), Expect = 2.3e-34, Sum P(2) = 2.3e-34
Identities = 58/143 (40%), Positives = 89/143 (62%)
Query: 303 NSGDSSTH-VQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQ 361
N G++ + IN+SDL I+ RSGG GGQ+ N ++AVRI+H PT I+ +ER+Q
Sbjct: 210 NGGNNKMNDFVINKSDLVIQTMRSGGKGGQNVNKVETAVRILHKPTNISVKASSERTQLL 269
Query: 362 NKASAMGVLQSRVNQLEIARQAQMNAEH---TQSLTDISWGNQIRTYVLHPYRMVKDLRT 418
NK +A+ + ++ L + +A N ++ +SLT +G QIR YVL+ +M+KD RT
Sbjct: 270 NKRNALKRIYEKL--LYLQTEALKNKKYELANKSLTH--FGEQIRNYVLYGNKMIKDTRT 325
Query: 419 NYEVSDPDSVL-EGDLDGFILSY 440
N +D D VL +G++D FI +Y
Sbjct: 326 NVFSTDIDKVLYQGEIDIFIDAY 348
Score = 193 (73.0 bits), Expect = 2.3e-34, Sum P(2) = 2.3e-34
Identities = 44/114 (38%), Positives = 68/114 (59%)
Query: 205 SCYIEVQAGAGGTESMDWASMVLQMYKSWA----QRRGYRVTLMDEMPGEIAGIKRATIK 260
SC + + +G GGTE+ D+ +M+ MY + R+ + ++D E+ GIK+ IK
Sbjct: 51 SCSLILSSGTGGTEACDFCNMLYNMYIKYLCRIKNRKNIKYEVIDISKNEV-GIKKVEIK 109
Query: 261 VDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQIN 314
+DGEY+F +E G+HRLVR SPF++ ++ TSF V VIP + +V IN
Sbjct: 110 IDGEYSFYNFVSEKGIHRLVRNSPFNAQNKKMTSFVKVDVIPTLNFNDLNV-IN 162
>POMBASE|SPAC2F7.17 [details] [associations]
symbol:SPAC2F7.17 "mitochondrial peptide chain release
factor (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0003747 "translation release factor activity" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005739 "mitochondrion"
evidence=ISS] [GO:0006412 "translation" evidence=ISS] [GO:0006415
"translational termination" evidence=ISS] [GO:0016149 "translation
release factor activity, codon specific" evidence=IEA] [GO:0032543
"mitochondrial translation" evidence=NAS] InterPro:IPR000352
InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745
SMART:SM00937 InterPro:IPR014720 PomBase:SPAC2F7.17 GO:GO:0005739
EMBL:CU329670 Gene3D:3.30.160.20 GO:GO:0032543 GO:GO:0003747
GO:GO:0016149 eggNOG:COG0216 HOGENOM:HOG000074815 KO:K02835
PIR:S58161 RefSeq:NP_592987.1 ProteinModelPortal:Q09691
STRING:Q09691 EnsemblFungi:SPAC2F7.17.1 GeneID:2541478
KEGG:spo:SPAC2F7.17 OMA:QEANSIL OrthoDB:EOG4JWZP5 NextBio:20802577
Uniprot:Q09691
Length = 396
Score = 370 (135.3 bits), Expect = 4.6e-34, P = 4.6e-34
Identities = 96/295 (32%), Positives = 158/295 (53%)
Query: 153 QELLEHI-DMIKLAREENDTXXXXXXXXXXXTMRRKSKE--KELDALLSGELDPCS--CY 207
+ L E I D+ ++ +E+D + K + ++L+ L + D +
Sbjct: 86 KSLSEQISDLKQMEAQESDAEVKMMAVTEINEISNKIPKSIEDLENTLLPQADSYALPAL 145
Query: 208 IEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGE-IAGIKRATIKVDGEYA 266
IE++ G GGTE+ +A+ +++MY +A +G+ + + + + I A ++GE A
Sbjct: 146 IEIRPGVGGTEAAIFANELVEMYFQYANFKGWNCKFISKSAVQGLEAITEAIFSIEGEGA 205
Query: 267 FGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPN-SGDSSTHVQINESDLRIERFRS 325
+G+ E GVHR+ R ++ R HTS A+V V+P S D S+ + + S+++IE RS
Sbjct: 206 YGHLMLEGGVHRVQRTPATETKGRVHTSTASVIVLPQVSNDESSSLY-DSSEVKIEVMRS 264
Query: 326 GGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQM 385
GAGGQH N T+SAVR+ HIPTGIT + Q+ RSQHQNK A VL SR+ L A++ +
Sbjct: 265 RGAGGQHVNRTESAVRLTHIPTGITVSMQDSRSQHQNKEKAFLVLNSRLAALNAAKENEA 324
Query: 386 NA-EHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGD--LDGFI 437
+ +T ++RTY + R V D R + D + ++G+ D F+
Sbjct: 325 ERLKRKNQVTSSDRSEKLRTYNFNQNR-VTDHRIGLSMHDLSTFMQGEEKFDEFL 378
>UNIPROTKB|Q3MHI7 [details] [associations]
symbol:MTRF1 "Peptide chain release factor 1,
mitochondrial" species:9913 "Bos taurus" [GO:0005739
"mitochondrion" evidence=IEA] [GO:0016149 "translation release
factor activity, codon specific" evidence=IEA] InterPro:IPR000352
InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745
SMART:SM00937 InterPro:IPR014720 GO:GO:0005739 Gene3D:3.30.160.20
GO:GO:0016149 eggNOG:COG0216 HOGENOM:HOG000074815
HOVERGEN:HBG017071 KO:K02835 GeneTree:ENSGT00390000011879
EMBL:BC105224 IPI:IPI00698094 RefSeq:NP_001030185.1
UniGene:Bt.37767 HSSP:P0A7I0 ProteinModelPortal:Q3MHI7
STRING:Q3MHI7 PRIDE:Q3MHI7 Ensembl:ENSBTAT00000016261 GeneID:504754
KEGG:bta:504754 CTD:9617 InParanoid:Q3MHI7 OMA:VWLFRHP
OrthoDB:EOG48KRBQ NextBio:20866812 Uniprot:Q3MHI7
Length = 447
Score = 360 (131.8 bits), Expect = 5.2e-33, P = 5.2e-33
Identities = 104/330 (31%), Positives = 164/330 (49%)
Query: 134 ISREHGSLMGKM---KEVKAFEQELLEHIDMIKLAREENDTXXXXXXXXXXXTMRRKSKE 190
++R H L KE++ EQ + E M K ++++ T+ +K
Sbjct: 108 LTRRHAELAPLAVIYKEIQEAEQAIEELESMCKSLNKQDEKQLQELALEERQTIAQKINM 167
Query: 191 --KEL-DALLSGE-LDPCSCYIEVQAG--AGGTESMDWASMVLQMYKSWAQRRGYRVTLM 244
EL +LL E D +EV +G GG + + MY++++ + +R L+
Sbjct: 168 LYSELFQSLLPKEKYDKNDVILEVTSGRTTGGDICQQFTREIFDMYQNYSSYKHWRFELL 227
Query: 245 DEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRR---HTSFAAVAVI 301
+ P + G+ A ++ G+ + + K E G+HR+ RI R HT +V V+
Sbjct: 228 NYTPADYGGLHHAAARISGDNVYKHLKYEGGIHRVQRIPEVGLSSRMQRIHTGTMSVIVL 287
Query: 302 PNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQ 361
P+ + V+++ DLRI+ FR+ GAGGQH NTTDSAVR++HIPTG+ CQ ERSQ +
Sbjct: 288 PHPDE--VDVKVDPKDLRIDTFRAKGAGGQHVNTTDSAVRLVHIPTGLVVECQQERSQIK 345
Query: 362 NKASAMGVLQSRVNQLEIAR-QAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNY 420
NK A+ VL++R+ Q I + + Q + + + +IRTY R V D R Y
Sbjct: 346 NKEIALRVLRARLYQQIIEKDKCQQRSARKLQVGTRAQSERIRTYNFTQDR-VTDHRIAY 404
Query: 421 EVSDPDSVLEGD--LDGFILSYLSASLDKD 448
EV + L G+ LD I L S D++
Sbjct: 405 EVRNIKEFLCGEKCLDQLIQRLLQ-SADEE 433
>ASPGD|ASPL0000035902 [details] [associations]
symbol:AN3462 species:162425 "Emericella nidulans"
[GO:0070126 "mitochondrial translational termination" evidence=IEA]
[GO:0016149 "translation release factor activity, codon specific"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0003747
"translation release factor activity" evidence=IEA]
InterPro:IPR000352 InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462
PROSITE:PS00745 SMART:SM00937 InterPro:IPR014720 GO:GO:0005737
Gene3D:3.30.160.20 EMBL:BN001306 GO:GO:0016149 HOGENOM:HOG000074815
OMA:QCQAGNA EnsemblFungi:CADANIAT00009571 Uniprot:C8VHA3
Length = 418
Score = 337 (123.7 bits), Expect = 7.9e-33, Sum P(2) = 7.9e-33
Identities = 82/245 (33%), Positives = 137/245 (55%)
Query: 205 SCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGE--IAGIKRATIKVD 262
SC +E++ GAGG E+ +A +LQMY ++ +G R TLM G+ + A ++V+
Sbjct: 143 SCLLEIRPGAGGDEASIFAFELLQMYVAFCAHQGLRSTLMKLERGDNRADALTEAVLEVE 202
Query: 263 GEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIP------------NSGDSSTH 310
E A+ + E GVHR+ R+ ++ R HTS +V V+P N D ++
Sbjct: 203 AEGAYDLLRTESGVHRVQRVPTTEAKGRTHTSAVSVMVLPSFPDTGGGDGAFNFDDPNSD 262
Query: 311 VQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVL 370
I+ ++R E+ R+ GAGGQH N T+SA+R+ H+PTGI + Q+ RSQH N+ A +L
Sbjct: 263 YYIDPQEVRTEKMRASGAGGQHVNKTESAIRLTHMPTGIVVSMQDSRSQHANRKKAWQIL 322
Query: 371 QSRVNQL-EIARQAQMNAEHTQSLTDISW---GNQIRTYVLHPYRMVKDLRTNYEVSDPD 426
++++ + + AR+ ++ ++ I G+++RTY R D R+ + V + D
Sbjct: 323 RAKLAEARQEAREQELVELRRGAMGGIGRMGRGDKVRTYNYGQSRCT-DHRSGFTVHNLD 381
Query: 427 SVLEG 431
+VLEG
Sbjct: 382 NVLEG 386
Score = 37 (18.1 bits), Expect = 7.9e-33, Sum P(2) = 7.9e-33
Identities = 8/26 (30%), Positives = 13/26 (50%)
Query: 98 VIKKRLQWKNLNVRLNLLSAELNKPN 123
V K +W N N ++ L + L P+
Sbjct: 77 VAKAWAEWSNANESMSELHSMLEDPD 102
>TAIR|locus:2099137 [details] [associations]
symbol:APG3 "AT3G62910" species:3702 "Arabidopsis
thaliana" [GO:0003747 "translation release factor activity"
evidence=IGI;ISS] [GO:0006415 "translational termination"
evidence=IGI;ISS] [GO:0009507 "chloroplast" evidence=ISM;IDA]
[GO:0009658 "chloroplast organization" evidence=IMP;NAS]
[GO:0010027 "thylakoid membrane organization" evidence=RCA;IMP]
[GO:0032544 "plastid translation" evidence=IGI] [GO:0006783 "heme
biosynthetic process" evidence=RCA] [GO:0009902 "chloroplast
relocation" evidence=RCA] [GO:0016117 "carotenoid biosynthetic
process" evidence=RCA] [GO:0034660 "ncRNA metabolic process"
evidence=RCA] [GO:0042793 "transcription from plastid promoter"
evidence=RCA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=RCA] HAMAP:MF_00093 InterPro:IPR000352
InterPro:IPR004373 InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462
PROSITE:PS00745 SMART:SM00937 InterPro:IPR014720 GO:GO:0009507
EMBL:CP002686 GenomeReviews:BA000014_GR Gene3D:3.30.160.20
GO:GO:0009658 GO:GO:0010027 GO:GO:0003747 GO:GO:0032544
GO:GO:0016149 eggNOG:COG0216 HOGENOM:HOG000074815 KO:K02835
TIGRFAMs:TIGR00019 OMA:SVMLEIR HSSP:P07012 EMBL:AY090253
EMBL:AY125535 EMBL:AB109893 IPI:IPI00529197 RefSeq:NP_191850.2
UniGene:At.28015 ProteinModelPortal:Q8RX79 SMR:Q8RX79 STRING:Q8RX79
PaxDb:Q8RX79 PRIDE:Q8RX79 EnsemblPlants:AT3G62910.1 GeneID:825466
KEGG:ath:AT3G62910 TAIR:At3g62910 InParanoid:Q8RX79
PhylomeDB:Q8RX79 ProtClustDB:CLSN2690621 Genevestigator:Q8RX79
Uniprot:Q8RX79
Length = 422
Score = 357 (130.7 bits), Expect = 1.1e-32, P = 1.1e-32
Identities = 95/349 (27%), Positives = 178/349 (51%)
Query: 105 WKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKL 164
WK L+V+L A+ + + + + E ++ + K E++LLE + K
Sbjct: 68 WKELSVKL----ADPDVVSNQSEYQKLAQSMSELDEVVTVFRRFKDCEKQLLESKVLAKE 123
Query: 165 AREENDTXXXXXXXXXXXTMRRKSKEKELDALL--SGELDPCSCYIEVQAGAGGTESMDW 222
A ++ D T + EK+L LL S LD + +EV+AG GG E+ W
Sbjct: 124 AGDDEDMAEMIGSEINSLTKEIEELEKQLKVLLLPSDPLDARNILLEVRAGTGGDEAAIW 183
Query: 223 ASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRI 282
+++MY+ +++R ++ +++ E G K +++ G + K E GVHR+ R+
Sbjct: 184 TGDLVRMYQRYSERSSWKFSMVSCSEAEHGGYKTCVMEIKGNRVYSKLKYESGVHRVQRV 243
Query: 283 SPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRI 342
++ R HTS A VA++P + + V I+ D+ + RSGGAGGQ+ N ++A+ +
Sbjct: 244 PQTETQGRVHTSTATVAIMPEADE--VEVVIDPKDIELTSARSGGAGGQNVNKVETAIDL 301
Query: 343 IHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQ-MNAEHTQSLTDISWGNQ 401
H P+GI C ER+Q +NKA A +L++++ ++++ Q + + E + + +
Sbjct: 302 FHKPSGIRIFCTEERTQIRNKARAFQLLRAKLYEIKVREQQEKIRNERKSQVGTGARSEK 361
Query: 402 IRTYVLHPYRMVKD-LRTNYEVSDPDSVLEGDLDGFILSYLSASLDKDE 449
IRTY R+ L+ N+ ++ + L+G L+ + + A+L++ E
Sbjct: 362 IRTYNYKDSRVTDHRLKMNFALT---TFLDGALEDAVQA--CAALEQKE 405
>CGD|CAL0003702 [details] [associations]
symbol:orf19.1303 species:5476 "Candida albicans" [GO:0005739
"mitochondrion" evidence=IEA] [GO:0003747 "translation release
factor activity" evidence=IEA] [GO:0070126 "mitochondrial
translational termination" evidence=IEA] InterPro:IPR000352
InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745
SMART:SM00937 InterPro:IPR014720 CGD:CAL0003702 GO:GO:0005737
Gene3D:3.30.160.20 GO:GO:0016149 EMBL:AACQ01000138
HOGENOM:HOG000074815 KO:K02835 RefSeq:XP_709944.1
ProteinModelPortal:Q59TR5 STRING:Q59TR5 GeneID:3645356
KEGG:cal:CaO19.1303 Uniprot:Q59TR5
Length = 394
Score = 355 (130.0 bits), Expect = 1.8e-32, P = 1.8e-32
Identities = 88/236 (37%), Positives = 134/236 (56%)
Query: 206 CYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEY 265
C IE++ G GG E+ + +L MY ++A ++ ++ E I A + +D
Sbjct: 150 CIIELRPGVGGNEASLFTGDLLNMYMNFASEMNWKYKIISEGKNSSGFINEAILSIDTLG 209
Query: 266 AFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPN-SGDSSTHVQINE-----SDLR 319
++ + E GVHR+ RI ++ R HTS AAV V+P S + + ++ +E ++R
Sbjct: 210 SYDIMRHESGVHRVQRIPETETKGRVHTSTAAVVVLPKLSEGNESSLKDDERVFAPGEVR 269
Query: 320 IERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLE- 378
I+ R+GG GGQH NTTDSAVR++HIPTG+ Q+ERSQ NKA A +L+SR+ Q E
Sbjct: 270 IDTMRAGGKGGQHVNTTDSAVRLLHIPTGMIVIQQDERSQPLNKAKAFAILRSRLAQKEQ 329
Query: 379 ---IARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEG 431
+ +Q ++ + S TD S ++I+TY R V D R NY + D + VLEG
Sbjct: 330 EEEMLKQKKLRTDQVSS-TDRS--DKIKTYNYKENR-VTDHRINYSMHDLEGVLEG 381
>MGI|MGI:2384815 [details] [associations]
symbol:Mtrf1 "mitochondrial translational release factor 1"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0003747 "translation release factor activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0006412 "translation"
evidence=IEA] [GO:0006415 "translational termination" evidence=IEA]
[GO:0016149 "translation release factor activity, codon specific"
evidence=IEA] InterPro:IPR000352 InterPro:IPR005139 Pfam:PF00472
Pfam:PF03462 PROSITE:PS00745 SMART:SM00937 InterPro:IPR014720
MGI:MGI:2384815 GO:GO:0005739 Gene3D:3.30.160.20 GO:GO:0016149
eggNOG:COG0216 HOGENOM:HOG000074815 HOVERGEN:HBG017071 KO:K02835
GeneTree:ENSGT00390000011879 CTD:9617 OMA:VWLFRHP OrthoDB:EOG48KRBQ
EMBL:AK043981 EMBL:BC028898 IPI:IPI00169629 RefSeq:NP_666072.3
UniGene:Mm.35306 ProteinModelPortal:Q8K126 SMR:Q8K126 STRING:Q8K126
PhosphoSite:Q8K126 PRIDE:Q8K126 Ensembl:ENSMUST00000022600
GeneID:211253 KEGG:mmu:211253 UCSC:uc007usw.1 InParanoid:Q8K126
NextBio:373184 Bgee:Q8K126 CleanEx:MM_MTRF1 Genevestigator:Q8K126
GermOnline:ENSMUSG00000022022 Uniprot:Q8K126
Length = 446
Score = 355 (130.0 bits), Expect = 1.8e-32, P = 1.8e-32
Identities = 94/266 (35%), Positives = 140/266 (52%)
Query: 193 LDALLSGE-LDPCSCYIEVQAG--AGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPG 249
L+ L+ E D +EV +G GG + + MY++++ + ++ L++ P
Sbjct: 172 LERLVPKEKYDWSDVILEVTSGRTTGGDICQQFTREIFDMYQNYSYYKHWKFELLNYTPA 231
Query: 250 EIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRR---HTSFAAVAVIPNSGD 306
+ G+ A ++ G+ + + K E G+HR+ RI R HT +V V+P +
Sbjct: 232 DYGGLHHAAARISGDSVYKHLKYEGGIHRVQRIPEVGLSSRMQRIHTGTMSVIVLPQPDE 291
Query: 307 SSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASA 366
V+++ DLR++ FR+ GAGGQH NTTDSAVR++HIPTG+ CQ ERSQ +NK A
Sbjct: 292 --VDVKVDPKDLRVDTFRARGAGGQHVNTTDSAVRLVHIPTGLVVECQQERSQLKNKEIA 349
Query: 367 MGVLQSRVNQ--LEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSD 424
+ VL++R+ Q +E R Q NA Q T +IRTY R V D R YEV D
Sbjct: 350 LRVLRARLYQQIIEKDRCQQQNARKLQVGTRAQ-SERIRTYNFTQDR-VTDHRIAYEVRD 407
Query: 425 PDSVLEGD--LDGFILSYLSASLDKD 448
L G+ LD I L S D++
Sbjct: 408 IKEFLRGEKCLDQLIERLLQ-SADEE 432
>UNIPROTKB|E2RAT2 [details] [associations]
symbol:MTRF1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0016149 "translation release factor activity, codon specific"
evidence=IEA] InterPro:IPR000352 InterPro:IPR005139 Pfam:PF00472
Pfam:PF03462 PROSITE:PS00745 SMART:SM00937 InterPro:IPR014720
GO:GO:0005739 Gene3D:3.30.160.20 GO:GO:0016149 KO:K02835
GeneTree:ENSGT00390000011879 CTD:9617 OMA:VWLFRHP EMBL:AAEX03013173
RefSeq:XP_848713.1 ProteinModelPortal:E2RAT2
Ensembl:ENSCAFT00000007724 GeneID:485465 KEGG:cfa:485465
NextBio:20859471 Uniprot:E2RAT2
Length = 444
Score = 349 (127.9 bits), Expect = 7.7e-32, P = 7.7e-32
Identities = 103/330 (31%), Positives = 161/330 (48%)
Query: 134 ISREHGSLM---GKMKEVKAFEQELLEHIDMIKLAREENDTXXXXXXXXXXXTMRRKSKE 190
++R H L +E++ EQ + E M K ++++ T+ K
Sbjct: 105 LNRRHAELAPLAAIYQEIQEAEQAIEELDSMCKSLSKQDEKQLQELALEERQTIAEKINV 164
Query: 191 --KEL-DALLSGE-LDPCSCYIEVQAG--AGGTESMDWASMVLQMYKSWAQRRGYRVTLM 244
EL +L+ E D IEV +G GG + + MY++++ + ++ L+
Sbjct: 165 LYSELFQSLVPKEKYDKNDVIIEVTSGRTTGGDICQQFTREIFDMYQNYSSYKNWKFELL 224
Query: 245 DEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRR---HTSFAAVAVI 301
+ P + G+ A ++ G+ + + K E GVHR+ RI R HT +V V+
Sbjct: 225 NYTPADYGGLHHAAARISGDNVYKHLKYEGGVHRVQRIPEVGLSARMQRIHTGTMSVIVL 284
Query: 302 PNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQ 361
P + V+++ DLRI+ FR+ GAGGQH NTTDSAVR++HIPTG+ CQ ERSQ +
Sbjct: 285 PQPDE--VDVKVDPKDLRIDTFRAKGAGGQHVNTTDSAVRLVHIPTGLVVECQQERSQIK 342
Query: 362 NKASAMGVLQSRVNQLEIAR-QAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNY 420
NK A+ VL++R+ Q I + + Q + + + +IRTY R V D R Y
Sbjct: 343 NKEIALRVLRARLYQQIIEKDKCQQQSTRKLQVGTRAQSERIRTYNFTQDR-VTDHRIAY 401
Query: 421 EVSDPDSVLEGD--LDGFILSYLSASLDKD 448
EV L G+ LD I L S D++
Sbjct: 402 EVRGIKEFLCGEKCLDQLIQRLLH-SADEE 430
>SGD|S000003111 [details] [associations]
symbol:MRF1 "Mitochondrial translation release factor"
species:4932 "Saccharomyces cerevisiae" [GO:0005739 "mitochondrion"
evidence=IEA;IDA;IMP] [GO:0070126 "mitochondrial translational
termination" evidence=IGI;IMP] [GO:0006415 "translational
termination" evidence=IEA;IMP] [GO:0006412 "translation"
evidence=IEA] [GO:0003747 "translation release factor activity"
evidence=IEA;IGI;IDA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016149 "translation release factor activity, codon specific"
evidence=IEA] [GO:0032543 "mitochondrial translation" evidence=IMP]
InterPro:IPR000352 InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462
PROSITE:PS00745 SMART:SM00937 SGD:S000003111 InterPro:IPR014720
GO:GO:0005739 EMBL:BK006941 Gene3D:3.30.160.20 GO:GO:0003747
EMBL:X99960 GO:GO:0016149 RefSeq:NP_011376.3 GeneID:852738
KEGG:sce:YGL139W EMBL:X60381 GO:GO:0070126 eggNOG:COG0216
HOGENOM:HOG000074815 KO:K02835 GeneTree:ENSGT00390000011879
OrthoDB:EOG4JWZP5 EMBL:Z72665 PIR:S28602 RefSeq:NP_011372.3
ProteinModelPortal:P30775 SMR:P30775 DIP:DIP-2626N IntAct:P30775
MINT:MINT-427494 STRING:P30775 PaxDb:P30775 EnsemblFungi:YGL143C
GeneID:852734 KEGG:sce:YGL143C CYGD:YGL143c OMA:PPHPFAD
NextBio:972135 Genevestigator:P30775 GermOnline:YGL143C
Uniprot:P30775
Length = 413
Score = 349 (127.9 bits), Expect = 7.7e-32, P = 7.7e-32
Identities = 82/239 (34%), Positives = 134/239 (56%)
Query: 208 IEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEI-AGIKRATIKVDGEYA 266
+E++ G GG E+M + +L MY +A R ++ ++ + E +GI A + ++ +
Sbjct: 157 LELRPGVGGIEAMIFTQNLLDMYIGYANYRKWKYRIISKNENESGSGIIDAILSIEEAGS 216
Query: 267 FGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTH-VQINE-----SDLRI 320
+ + E GVHR+ RI ++ R HTS AAV V+P GD S + E ++R+
Sbjct: 217 YDRLRFEAGVHRVQRIPSTETKGRTHTSTAAVVVLPQIGDESAKSIDAYERTFKPGEIRV 276
Query: 321 ERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLE-I 379
+ R+ G GGQH NTTDSAVR+ HIP+GI + Q+ERSQH+NKA A +L++R+ + E +
Sbjct: 277 DIMRASGKGGQHVNTTDSAVRLTHIPSGIVVSMQDERSQHKNKAKAFTILRARLAEKERL 336
Query: 380 ARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGD-LDGFI 437
++ + ++ + ++IRTY P + D R + + D VL G+ LD I
Sbjct: 337 EKEEKERKARKSQVSSTNRSDKIRTYNF-PQNRITDHRCGFTLLDLPGVLSGERLDEVI 394
>UNIPROTKB|E1BXF8 [details] [associations]
symbol:MTRF1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0016149 "translation release factor activity, codon
specific" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
InterPro:IPR000352 InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462
PROSITE:PS00745 SMART:SM00937 InterPro:IPR014720 GO:GO:0005739
Gene3D:3.30.160.20 GO:GO:0016149 GeneTree:ENSGT00390000011879
OMA:VWLFRHP EMBL:AADN02005497 IPI:IPI00591431
Ensembl:ENSGALT00000027399 Uniprot:E1BXF8
Length = 417
Score = 347 (127.2 bits), Expect = 1.3e-31, P = 1.3e-31
Identities = 95/304 (31%), Positives = 153/304 (50%)
Query: 146 KEVKAFEQELLEHIDMIKLAREENDTXXXXXXXXXXXTMRRKSKE--KELDALL--SGEL 201
+E++ E EL E M + ++ T+ +K ++L LL +
Sbjct: 90 QEIREAESELQELETMCRELDSRDEKQLLELALEEKETLDKKINTLCRKLFQLLVPKEKY 149
Query: 202 DPCSCYIEVQAG--AGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATI 259
D +EV AG GG + + +MY+++A + + +++ +P EI G+ A
Sbjct: 150 DKSHVILEVTAGRTTGGDICQQFTKEMFEMYQNYADYKCWTFDILNYVPAEIGGLHHAAA 209
Query: 260 KVDGEYAFGYAKAEVGVHRLVRI--SPFDSGKRR-HTSFAAVAVIPNSGDSSTHVQINES 316
+ G+ + + K E G HR+ RI + S +R HT +V V+P + V+++
Sbjct: 210 HISGDDVYRHLKYEGGTHRVQRIPETGLSSRMQRIHTGTMSVIVLPQPEE--VDVKVDPK 267
Query: 317 DLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQ 376
DLRI+ FR+ GAGGQH N TDSAVRI+H+PTG+ CQ ERSQ NK A+ L++++ Q
Sbjct: 268 DLRIDTFRAKGAGGQHVNKTDSAVRIVHLPTGVVVECQQERSQQMNKEIALRTLRAKLYQ 327
Query: 377 LEIARQ-AQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEG--DL 433
I +Q +Q + L + +IRTY R V D R +Y+ + +L G +L
Sbjct: 328 QIIEKQLSQEQSARKLQLGTRAQSERIRTYNFTQDR-VTDHRISYDARNIKEILSGKEEL 386
Query: 434 DGFI 437
D I
Sbjct: 387 DKLI 390
>UNIPROTKB|O75570 [details] [associations]
symbol:MTRF1 "Peptide chain release factor 1,
mitochondrial" species:9606 "Homo sapiens" [GO:0016149 "translation
release factor activity, codon specific" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0003747 "translation release
factor activity" evidence=TAS] [GO:0006449 "regulation of
translational termination" evidence=TAS] InterPro:IPR000352
InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745
SMART:SM00937 InterPro:IPR014720 GO:GO:0005739 Gene3D:3.30.160.20
GO:GO:0003747 GO:GO:0006449 GO:GO:0016149 EMBL:AL354696
eggNOG:COG0216 HOGENOM:HOG000074815 HOVERGEN:HBG017071 KO:K02835
CTD:9617 OrthoDB:EOG48KRBQ EMBL:AF072934 EMBL:BC042196
IPI:IPI00026157 RefSeq:NP_004285.2 UniGene:Hs.382176
ProteinModelPortal:O75570 SMR:O75570 IntAct:O75570 STRING:O75570
PhosphoSite:O75570 PRIDE:O75570 Ensembl:ENST00000379477
Ensembl:ENST00000379480 Ensembl:ENST00000452359 GeneID:9617
KEGG:hsa:9617 UCSC:uc001uxx.3 GeneCards:GC13M041790 HGNC:HGNC:7469
HPA:HPA043316 MIM:604601 neXtProt:NX_O75570 PharmGKB:PA31273
InParanoid:O75570 PhylomeDB:O75570 GenomeRNAi:9617 NextBio:36079
ArrayExpress:O75570 Bgee:O75570 CleanEx:HS_MTRF1
Genevestigator:O75570 GermOnline:ENSG00000120662 Uniprot:O75570
Length = 445
Score = 346 (126.9 bits), Expect = 1.6e-31, P = 1.6e-31
Identities = 105/331 (31%), Positives = 162/331 (48%)
Query: 134 ISREHGSLM---GKMKEVKAFEQELLEHIDMIKLAREENDTXXXXXXXXXXXTMRRKSKE 190
++R H L +E++ EQ + E M K ++++ T+ +K
Sbjct: 106 LNRRHAELAPLAAIYQEIQETEQAIEELESMCKSLNKQDEKQLQELALEERQTIDQKINM 165
Query: 191 --KEL-DALLSGE-LDPCSCYIEVQAG--AGGTESMDWASMVLQMYKSWAQRRGYRVTLM 244
EL +L+ E D +EV AG GG + + MY++++ + ++ L+
Sbjct: 166 LYNELFQSLVPKEKYDKNDVILEVTAGRTTGGDICQQFTREIFDMYQNYSCYKHWQFELL 225
Query: 245 DEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRR---HTSFAAVAVI 301
+ P + G+ A ++ G+ + + K E G+HR+ RI R HT +V V+
Sbjct: 226 NYTPADYGGLHHAAARISGDGVYKHLKYEGGIHRVQRIPEVGLSSRMQRIHTGTMSVIVL 285
Query: 302 PNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQ 361
P + V+++ DLRI+ FR+ GAGGQH N TDSAVR++HIPTG+ CQ ERSQ +
Sbjct: 286 PQPDE--VDVKLDPKDLRIDTFRAKGAGGQHVNKTDSAVRLVHIPTGLVVECQQERSQIK 343
Query: 362 NKASAMGVLQSRVNQ--LEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTN 419
NK A VL++R+ Q +E ++ Q +A Q T +IRTY R V D R
Sbjct: 344 NKEIAFRVLRARLYQQIIEKDKRQQQSARKLQVGTRAQ-SERIRTYNFTQDR-VSDHRIA 401
Query: 420 YEVSDPDSVLEGD--LDGFILSYLSASLDKD 448
YEV D L G LD I L S D++
Sbjct: 402 YEVRDIKEFLCGGKGLDQLIQRLLQ-SADEE 431
>UNIPROTKB|F1RJ87 [details] [associations]
symbol:MTRF1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0016149
"translation release factor activity, codon specific" evidence=IEA]
InterPro:IPR000352 InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462
PROSITE:PS00745 SMART:SM00937 InterPro:IPR014720 GO:GO:0005739
Gene3D:3.30.160.20 GO:GO:0016149 KO:K02835
GeneTree:ENSGT00390000011879 CTD:9617 OMA:VWLFRHP EMBL:CU062515
RefSeq:NP_001230509.1 UniGene:Ssc.41357 Ensembl:ENSSSCT00000010343
GeneID:100155739 KEGG:ssc:100155739 Uniprot:F1RJ87
Length = 446
Score = 345 (126.5 bits), Expect = 2.0e-31, P = 2.0e-31
Identities = 102/331 (30%), Positives = 163/331 (49%)
Query: 134 ISREHGSLMGKM---KEVKAFEQELLEHIDMIKLAREENDTXXXXXXXXXXXTMRRKSKE 190
++R H L KE++ EQ + E M K ++++ T+ +K
Sbjct: 107 LNRRHAELAPLAVIYKEIQEAEQAIEELESMCKSLNKQDEKQLQELALEEKRTIAQKINM 166
Query: 191 --KEL-DALLSGE-LDPCSCYIEVQAG--AGGTESMDWASMVLQMYKSWAQRRGYRVTLM 244
EL +L+ E D +EV +G GG + + MY++++ + + L+
Sbjct: 167 LYHELFQSLVPKEKYDKNDVILEVTSGRTTGGDICQQFTREIFDMYQNYSSYKHWTFELL 226
Query: 245 DEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRR---HTSFAAVAVI 301
+ P + G+ A ++ G + + K E G+HR+ RI R HT +V V+
Sbjct: 227 NYTPADYGGLHHAAARISGANVYKHLKYEGGIHRVQRIPEVGLSSRMQRIHTGTMSVIVL 286
Query: 302 PNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQ 361
P + V+++ DLRI+ FR+ GAGGQH NTTDSAVR++H+PTG+ CQ ERSQ +
Sbjct: 287 PQPDE--VDVKVDPKDLRIDTFRAKGAGGQHVNTTDSAVRLVHVPTGLVVECQQERSQIK 344
Query: 362 NKASAMGVLQSRVNQLEIARQA--QMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTN 419
NK A+ VL++R+ Q I ++ Q +A Q T +IRTY R V D R
Sbjct: 345 NKEIALRVLRARLYQQIIEKEKCQQQSARKLQVGTRAQ-SERIRTYNFTQDR-VTDHRIA 402
Query: 420 YEVSDPDSVLEGD--LDGFILSYLSASLDKD 448
YEV + L G+ LD ++ L + D++
Sbjct: 403 YEVRNIKEFLCGEKCLD-LLIQRLLQTADEE 432
>UNIPROTKB|B4DG01 [details] [associations]
symbol:MTRF1 "Peptide chain release factor 1,
mitochondrial" species:9606 "Homo sapiens" [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016149 "translation release factor activity,
codon specific" evidence=IEA] InterPro:IPR000352 InterPro:IPR005139
Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745 SMART:SM00937
InterPro:IPR014720 GO:GO:0005737 Gene3D:3.30.160.20 GO:GO:0016149
EMBL:AL354696 HOGENOM:HOG000074815 HOVERGEN:HBG017071 OMA:VWLFRHP
UniGene:Hs.382176 HGNC:HGNC:7469 EMBL:AK294343 IPI:IPI00909024
SMR:B4DG01 STRING:B4DG01 Ensembl:ENST00000430347 UCSC:uc010tff.2
Uniprot:B4DG01
Length = 468
Score = 342 (125.4 bits), Expect = 4.2e-31, P = 4.2e-31
Identities = 97/305 (31%), Positives = 152/305 (49%)
Query: 134 ISREHGSLM---GKMKEVKAFEQELLEHIDMIKLAREENDTXXXXXXXXXXXTMRRKSKE 190
++R H L +E++ EQ + E M K ++++ T+ +K
Sbjct: 119 LNRRHAELAPLAAIYQEIQETEQAIEELESMCKSLNKQDEKQLQELALEERQTIDQKINM 178
Query: 191 --KEL-DALLSGE-LDPCSCYIEVQAG--AGGTESMDWASMVLQMYKSWAQRRGYRVTLM 244
EL +L+ E D +EV AG GG + + MY++++ + ++ L+
Sbjct: 179 LYNELFQSLVPKEKYDKNDVILEVTAGRTTGGDICQQFTREIFDMYQNYSCYKHWQFELL 238
Query: 245 DEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRR---HTSFAAVAVI 301
+ P + G+ A ++ G+ + + K E G+HR+ RI R HT +V V+
Sbjct: 239 NYTPADYGGLHHAAARISGDGVYKHLKYEGGIHRVQRIPEVGLSSRMQRIHTGTMSVIVL 298
Query: 302 PNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQ 361
P + V+++ DLRI+ FR+ GAGGQH N TDSAVR++HIPTG+ CQ ERSQ +
Sbjct: 299 PQPDE--VDVKLDPKDLRIDTFRAKGAGGQHVNKTDSAVRLVHIPTGLVVECQQERSQIK 356
Query: 362 NKASAMGVLQSRVNQ--LEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTN 419
NK A VL++R+ Q +E ++ Q +A Q T +IRTY R V D R
Sbjct: 357 NKEIAFRVLRARLYQQIIEKDKRQQQSARKLQVGTRAQ-SERIRTYNFTQDR-VSDHRIA 414
Query: 420 YEVSD 424
YEV D
Sbjct: 415 YEVRD 419
>UNIPROTKB|F6V8L3 [details] [associations]
symbol:MTRF1L "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016149 "translation release factor activity,
codon specific" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR000352 InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462
PROSITE:PS00745 InterPro:IPR014720 GO:GO:0005737 Gene3D:3.30.160.20
GO:GO:0016149 GeneTree:ENSGT00390000011879
Ensembl:ENSCAFT00000000841 EMBL:AAEX03000279 OMA:DCTISIS
Uniprot:F6V8L3
Length = 238
Score = 341 (125.1 bits), Expect = 5.4e-31, P = 5.4e-31
Identities = 82/231 (35%), Positives = 129/231 (55%)
Query: 220 MDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRL 279
M + S + MY+ +A + + ++ P EI G++ A+ + G A+ + K E GVHR+
Sbjct: 1 MLFTSEMFDMYQQYAAFKRWHFETLEYFPSEIGGLRHASASIGGLEAYKHMKFEGGVHRV 60
Query: 280 VRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSA 339
R+ + R HTS VA++P + ++ IN DLRI R+ GAGGQH NTTDSA
Sbjct: 61 QRVPKTEKQGRIHTSTMTVAILPQP--TEINLVINPKDLRIHTKRASGAGGQHVNTTDSA 118
Query: 340 VRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQA--QMNAEHTQSLTDIS 397
VRI+H+PTG+ + CQ ERSQ +N+ AM L++++ + + + + +A Q T
Sbjct: 119 VRIVHLPTGVVSECQQERSQLKNREMAMKKLRAKLYSMYLEEETSKRYSARKIQVGTK-G 177
Query: 398 WGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASLDKD 448
+IRTY P V D R N + D ++ ++G+ ++L L SL KD
Sbjct: 178 RSEKIRTYNF-PQNRVTDHRINKSLHDLETFMQGE---YLLDELVQSL-KD 223
>ZFIN|ZDB-GENE-050220-8 [details] [associations]
symbol:zgc:113104 "zgc:113104" species:7955 "Danio
rerio" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0016149
"translation release factor activity, codon specific" evidence=IEA]
[GO:0006415 "translational termination" evidence=IEA] [GO:0003747
"translation release factor activity" evidence=IEA]
InterPro:IPR000352 InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462
PROSITE:PS00745 InterPro:IPR014720 ZFIN:ZDB-GENE-050220-8
GO:GO:0005737 Gene3D:3.30.160.20 GO:GO:0016149 HOGENOM:HOG000074815
KO:K02835 EMBL:BC090173 IPI:IPI00484442 RefSeq:NP_001012512.1
UniGene:Dr.77520 ProteinModelPortal:Q5EB09 GeneID:503530
KEGG:dre:503530 InParanoid:Q5EB09 NextBio:20866191 Uniprot:Q5EB09
Length = 235
Score = 322 (118.4 bits), Expect = 5.6e-29, P = 5.6e-29
Identities = 80/232 (34%), Positives = 121/232 (52%)
Query: 226 VLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPF 285
+ MY+ +A + + L + P E G+ A+++V GE F + K E G HR+ RI
Sbjct: 1 MFDMYQGFASYKNWDFELFNYTPAEYGGLHHASVRVSGECVFRWLKFEGGTHRVQRIPEV 60
Query: 286 DSGKRR---HTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRI 342
R HT V V+P + + I DLRI+ FRS GAGGQH NTTDSAVR+
Sbjct: 61 GLSSRMQRIHTGTMTVIVLPQMEE--VDIDIAPKDLRIDTFRSRGAGGQHVNTTDSAVRL 118
Query: 343 IHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDI---SWG 399
+H+PTG + CQ RSQ +N+ +A+ VL++R++Q + +Q + HT + +
Sbjct: 119 VHLPTGTVSECQQFRSQLKNRETALRVLRARLHQCMMGQQREQT--HTARRLQVGTRAQS 176
Query: 400 NQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGF--ILSYLSASLDKDE 449
+IRTY R V D R + D + G +G +L L + D++E
Sbjct: 177 ERIRTYNFTQDR-VTDHRIGFVTRDIKEFMRG-AEGLEDLLRLLQENQDREE 226
>UNIPROTKB|Q5TF45 [details] [associations]
symbol:MTRF1L "Peptide chain release factor 1-like,
mitochondrial" species:9606 "Homo sapiens" [GO:0003747 "translation
release factor activity" evidence=IEA] InterPro:IPR000352
Pfam:PF00472 PROSITE:PS00745 InterPro:IPR014720 Gene3D:3.30.160.20
GO:GO:0005622 GO:GO:0003747 EMBL:AL080276 eggNOG:COG0216
HOGENOM:HOG000074815 UniGene:Hs.225836 HGNC:HGNC:21051
IPI:IPI00514520 SMR:Q5TF45 STRING:Q5TF45 Ensembl:ENST00000448966
Uniprot:Q5TF45
Length = 164
Score = 278 (102.9 bits), Expect = 5.0e-24, P = 5.0e-24
Identities = 55/127 (43%), Positives = 82/127 (64%)
Query: 253 GIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQ 312
G++ A+ + G A+ + K E GVHR+ R+ + R HTS VA++P + ++
Sbjct: 40 GLRHASASIGGSEAYRHMKFEGGVHRVQRVPKTEKQGRVHTSTMTVAILPQP--TEINLV 97
Query: 313 INESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQS 372
IN DLRI+ R+ GAGGQH NTTDSAVRI+H+PTG+ + CQ ERSQ +NK AM L++
Sbjct: 98 INPKDLRIDTKRASGAGGQHVNTTDSAVRIVHLPTGVVSECQQERSQLKNKELAMTKLRA 157
Query: 373 RVNQLEI 379
++ + +
Sbjct: 158 KLYSMHL 164
>GENEDB_PFALCIPARUM|PF14_0265 [details] [associations]
symbol:PF14_0265 "peptide chain release factor
1, putative" species:5833 "Plasmodium falciparum" [GO:0020011
"apicoplast" evidence=RCA] InterPro:IPR000352 InterPro:IPR005139
Pfam:PF00472 Pfam:PF03462 InterPro:IPR014720 GO:GO:0005737
Gene3D:3.30.160.20 EMBL:AE014187 GO:GO:0016149 KO:K02835
RefSeq:XP_001348439.1 ProteinModelPortal:Q8ILH8
EnsemblProtists:PF14_0265:mRNA GeneID:811847 KEGG:pfa:PF14_0265
EuPathDB:PlasmoDB:PF3D7_1428600 HOGENOM:HOG000281260
ProtClustDB:CLSZ2433411 Uniprot:Q8ILH8
Length = 304
Score = 270 (100.1 bits), Expect = 4.1e-23, P = 4.1e-23
Identities = 66/205 (32%), Positives = 105/205 (51%)
Query: 208 IEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGE--- 264
IE + G GG E+ W+ +L YK +A+R +V + ++ + + +++ E
Sbjct: 68 IEFRPGVGGEEAFTWSKELLNTYKLFAERNKCKVEKIQDISDSLVISSKENLRIIKEDKQ 127
Query: 265 ---YAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIE 321
+ K E G+H++ RI DS R H+S A VA+ + + + +IN DL+I
Sbjct: 128 IEINLYDLFKNESGIHQVKRIPKNDSKNRIHSSTATVAIFFHKKEEPKY-EINLKDLKIS 186
Query: 322 RFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIAR 381
FRS GGQ+ N +S V I+H PTGI CQ ER+Q NK AM L ++ +E
Sbjct: 187 TFRSSKPGGQNVNKIESGVCILHKPTGIQTECQEERTQELNKKLAMKRLIQKIQHMESKE 246
Query: 382 QAQM-NAEHTQSLTDISWGNQIRTY 405
+ M E + + + + N+IRTY
Sbjct: 247 KENMVQHERAKLIKESNRSNRIRTY 271
>UNIPROTKB|Q8ILH8 [details] [associations]
symbol:PF14_0265 "Peptide chain release factor 1, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0020011 "apicoplast"
evidence=RCA] InterPro:IPR000352 InterPro:IPR005139 Pfam:PF00472
Pfam:PF03462 InterPro:IPR014720 GO:GO:0005737 Gene3D:3.30.160.20
EMBL:AE014187 GO:GO:0016149 KO:K02835 RefSeq:XP_001348439.1
ProteinModelPortal:Q8ILH8 EnsemblProtists:PF14_0265:mRNA
GeneID:811847 KEGG:pfa:PF14_0265 EuPathDB:PlasmoDB:PF3D7_1428600
HOGENOM:HOG000281260 ProtClustDB:CLSZ2433411 Uniprot:Q8ILH8
Length = 304
Score = 270 (100.1 bits), Expect = 4.1e-23, P = 4.1e-23
Identities = 66/205 (32%), Positives = 105/205 (51%)
Query: 208 IEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGE--- 264
IE + G GG E+ W+ +L YK +A+R +V + ++ + + +++ E
Sbjct: 68 IEFRPGVGGEEAFTWSKELLNTYKLFAERNKCKVEKIQDISDSLVISSKENLRIIKEDKQ 127
Query: 265 ---YAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIE 321
+ K E G+H++ RI DS R H+S A VA+ + + + +IN DL+I
Sbjct: 128 IEINLYDLFKNESGIHQVKRIPKNDSKNRIHSSTATVAIFFHKKEEPKY-EINLKDLKIS 186
Query: 322 RFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIAR 381
FRS GGQ+ N +S V I+H PTGI CQ ER+Q NK AM L ++ +E
Sbjct: 187 TFRSSKPGGQNVNKIESGVCILHKPTGIQTECQEERTQELNKKLAMKRLIQKIQHMESKE 246
Query: 382 QAQM-NAEHTQSLTDISWGNQIRTY 405
+ M E + + + + N+IRTY
Sbjct: 247 KENMVQHERAKLIKESNRSNRIRTY 271
>TAIR|locus:2082563 [details] [associations]
symbol:PrfB3 "peptide chain release factor 3"
species:3702 "Arabidopsis thaliana" [GO:0003747 "translation
release factor activity" evidence=IEA;ISS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006415 "translational termination"
evidence=IEA;ISS] [GO:0016149 "translation release factor activity,
codon specific" evidence=IEA] [GO:0003730 "mRNA 3'-UTR binding"
evidence=IDA] [GO:0009507 "chloroplast" evidence=IDA] [GO:0009570
"chloroplast stroma" evidence=IDA] [GO:0043488 "regulation of mRNA
stability" evidence=IMP] [GO:0043565 "sequence-specific DNA
binding" evidence=IDA] [GO:0009658 "chloroplast organization"
evidence=IMP] [GO:0009772 "photosynthetic electron transport in
photosystem II" evidence=IMP] [GO:0010190 "cytochrome b6f complex
assembly" evidence=IMP] [GO:0048255 "mRNA stabilization"
evidence=IMP] [GO:0016556 "mRNA modification" evidence=RCA]
InterPro:IPR000352 InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462
SMART:SM00937 InterPro:IPR014720 GO:GO:0009570 EMBL:CP002686
GO:GO:0043565 Gene3D:3.30.160.20 GO:GO:0009658 GO:GO:0048255
GO:GO:0003730 GO:GO:0009772 GO:GO:0016149 GO:GO:0010190
IPI:IPI00516531 RefSeq:NP_191278.2 UniGene:At.34857
ProteinModelPortal:F4J264 SMR:F4J264 EnsemblPlants:AT3G57190.1
GeneID:824886 KEGG:ath:AT3G57190 OMA:DIIPLFL Uniprot:F4J264
Length = 406
Score = 278 (102.9 bits), Expect = 1.4e-22, P = 1.4e-22
Identities = 86/324 (26%), Positives = 154/324 (47%)
Query: 123 NLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREEN-DTXXXXXXXXXX 181
+LWDDP + I + + +K + + E +I+L + D
Sbjct: 87 DLWDDPAKSDEILLKLADRAKAVDSLKDLKYKAEEAKLIIQLGEMDAIDYSLFEQAYDSS 146
Query: 182 XTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRV 241
+ R E+ LL + D + +++G+ G +S W V+ MY WA+R G
Sbjct: 147 LDVSRSLHHYEMSKLLRDQYDAEGACMIIKSGSPGAKSQIWTEQVVSMYIKWAERLGQNA 206
Query: 242 TLMDE--MPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVA 299
+ ++ + +G+ ATI+ + E+A+GY E GVHRL+ IS S S A V
Sbjct: 207 RVAEKCSLLSNKSGVSSATIEFEFEFAYGYLLGERGVHRLI-IS---STSNEECS-ATVD 261
Query: 300 VIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQ 359
+IP +S ++ E DL + S A H ++ V I HIP+G+T ER++
Sbjct: 262 IIPLFLRASPDFEVKEGDLIV----SYPAKEDH-KIAENMVCIHHIPSGVTLQSSGERNR 316
Query: 360 HQNKASAMGVLQSRVNQLEIARQAQMN-AEHTQSLTDISWGNQIRTYVLHPYRMVKDLRT 418
N+ A+ L++++ L IA++ +++ S + + R+YV ++MV D +T
Sbjct: 317 FANRIKALNRLKAKL--LVIAKEQKVSDVNKIDSKNILEPREETRSYVSKGHKMVVDRKT 374
Query: 419 NYEVSDPDSVLEGDLDGFILSYLS 442
E+ D SVL+G++ + +++S
Sbjct: 375 GLEILDLKSVLDGNIGPLLGAHIS 398
>WB|WBGene00020993 [details] [associations]
symbol:W03F8.3 species:6239 "Caenorhabditis elegans"
[GO:0003747 "translation release factor activity" evidence=IEA]
[GO:0006415 "translational termination" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0016149 "translation release factor
activity, codon specific" evidence=IEA] InterPro:IPR000352
InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745
SMART:SM00937 InterPro:IPR014720 GO:GO:0005739 Gene3D:3.30.160.20
GO:GO:0016149 eggNOG:COG0216 HOGENOM:HOG000074815 KO:K02835
GeneTree:ENSGT00390000011879 EMBL:FO080652 PIR:T15102
RefSeq:NP_500737.1 ProteinModelPortal:O44568 SMR:O44568
STRING:O44568 PaxDb:O44568 EnsemblMetazoa:W03F8.3.1
EnsemblMetazoa:W03F8.3.2 GeneID:177294 KEGG:cel:CELE_W03F8.3
UCSC:W03F8.3 CTD:177294 WormBase:W03F8.3 InParanoid:O44568
OMA:QCQAGNA NextBio:896154 Uniprot:O44568
Length = 389
Score = 273 (101.2 bits), Expect = 3.3e-22, P = 3.3e-22
Identities = 71/225 (31%), Positives = 113/225 (50%)
Query: 201 LDPCS-CYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYR--VTLMDEMPGEIAGIKRA 257
LD S C IE+ GAGG E+M + +L MY+ A ++ +D +P + G++ A
Sbjct: 132 LDVLSKCQIELSCGAGGQEAMLFTGELLDMYQKLAAVNSWKWDPLQVDNVP--LGGVRSA 189
Query: 258 TIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESD 317
I V GE + + E GVHR+ R+ DS R HTS A+++V+P + S V +
Sbjct: 190 LIAVSGEKVYAKMRFEAGVHRVQRVPVNDS--RMHTSTASISVLPEPEEVS--VVVPSDS 245
Query: 318 LRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQL 377
++IE R+ G GGQ+ N +AVR+ H TGI C +ER QH N + + R+ +
Sbjct: 246 VKIEAMRASGPGGQNVNKRSTAVRMTHKETGIAVHCMDERFQHLN----IQIAYKRLAAI 301
Query: 378 EIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEV 422
+ +Q E S + G++ R + Y D T++ +
Sbjct: 302 LMQKQVDAMLEKIVSKRKLQVGSKARAEKIRTYNFQHDRVTDHRI 346
>UNIPROTKB|Q74EJ1 [details] [associations]
symbol:GSU0971 "Hydrolase, putative" species:243231
"Geobacter sulfurreducens PCA" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR000352 Pfam:PF00472 InterPro:IPR014720
Gene3D:3.30.160.20 GO:GO:0005622 GO:GO:0016787 EMBL:AE017180
GenomeReviews:AE017180_GR HOGENOM:HOG000244440 GO:GO:0003747
RefSeq:NP_952025.1 ProteinModelPortal:Q74EJ1 GeneID:2687546
KEGG:gsu:GSU0971 PATRIC:22024716 OMA:QHRNKTE ProtClustDB:CLSK828124
BioCyc:GSUL243231:GH27-988-MONOMER Uniprot:Q74EJ1
Length = 107
Score = 171 (65.3 bits), Expect = 3.5e-12, P = 3.5e-12
Identities = 33/68 (48%), Positives = 45/68 (66%)
Query: 311 VQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVL 370
V I ++D+++E +R+ G GGQH NTTDSAVRI H+PTGI RSQ QN+ AM L
Sbjct: 3 VDIRDADIKVEYYRASGPGGQHRNTTDSAVRIRHLPTGIVVQASESRSQAQNREKAMERL 62
Query: 371 QSRVNQLE 378
+ + + E
Sbjct: 63 RIALEKRE 70
>TIGR_CMR|GSU_0971 [details] [associations]
symbol:GSU_0971 "peptidyl-tRNA hydrolase domain protein"
species:243231 "Geobacter sulfurreducens PCA" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000352 Pfam:PF00472 InterPro:IPR014720
Gene3D:3.30.160.20 GO:GO:0005622 GO:GO:0016787 EMBL:AE017180
GenomeReviews:AE017180_GR HOGENOM:HOG000244440 GO:GO:0003747
RefSeq:NP_952025.1 ProteinModelPortal:Q74EJ1 GeneID:2687546
KEGG:gsu:GSU0971 PATRIC:22024716 OMA:QHRNKTE ProtClustDB:CLSK828124
BioCyc:GSUL243231:GH27-988-MONOMER Uniprot:Q74EJ1
Length = 107
Score = 171 (65.3 bits), Expect = 3.5e-12, P = 3.5e-12
Identities = 33/68 (48%), Positives = 45/68 (66%)
Query: 311 VQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVL 370
V I ++D+++E +R+ G GGQH NTTDSAVRI H+PTGI RSQ QN+ AM L
Sbjct: 3 VDIRDADIKVEYYRASGPGGQHRNTTDSAVRIRHLPTGIVVQASESRSQAQNREKAMERL 62
Query: 371 QSRVNQLE 378
+ + + E
Sbjct: 63 RIALEKRE 70
>TAIR|locus:2006897 [details] [associations]
symbol:AT1G33330 species:3702 "Arabidopsis thaliana"
[GO:0003747 "translation release factor activity" evidence=IEA;ISS]
[GO:0006415 "translational termination" evidence=IEA;ISS]
[GO:0009507 "chloroplast" evidence=IDA] [GO:0006783 "heme
biosynthetic process" evidence=RCA] InterPro:IPR000352 Pfam:PF00472
InterPro:IPR014720 EMBL:CP002684 GO:GO:0009507 Gene3D:3.30.160.20
GO:GO:0003747 EMBL:AC027035 EMBL:BT006129 EMBL:AK117494
IPI:IPI00545134 RefSeq:NP_174601.2 UniGene:At.28050
ProteinModelPortal:Q9C875 SMR:Q9C875 STRING:Q9C875 PRIDE:Q9C875
EnsemblPlants:AT1G33330.1 GeneID:840227 KEGG:ath:AT1G33330
TAIR:At1g33330 HOGENOM:HOG000152202 InParanoid:Q9C875 OMA:KSTIRTS
PhylomeDB:Q9C875 ProtClustDB:CLSN2680351 ArrayExpress:Q9C875
Genevestigator:Q9C875 Uniprot:Q9C875
Length = 257
Score = 160 (61.4 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 34/80 (42%), Positives = 52/80 (65%)
Query: 297 AVAVIPNSGDSSTHVQINESDL----RIERFRSGGAGGQHANTTDSAVRIIHIPTGITAT 352
+V+V+ + S +++ + +L R+E FR G GGQH N DSAVR+ H+PTGI A
Sbjct: 74 SVSVVSDV-QSPNYLKFTDEELMKQCRLETFRVSGPGGQHRNKRDSAVRLKHLPTGIVAQ 132
Query: 353 CQNERSQHQNKASAMGVLQS 372
+RSQH+N+ASA+ L++
Sbjct: 133 AVEDRSQHKNRASALNRLRT 152
>UNIPROTKB|Q74FR0 [details] [associations]
symbol:GSU0546 "Peptidyl-tRNA hydrolase-related protein"
species:243231 "Geobacter sulfurreducens PCA" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000352 Pfam:PF00472 InterPro:IPR014720
Gene3D:3.30.160.20 GO:GO:0005622 GO:GO:0016787 EMBL:AE017180
GenomeReviews:AE017180_GR HOGENOM:HOG000244440 GO:GO:0003747
RefSeq:NP_951604.1 ProteinModelPortal:Q74FR0 GeneID:2685772
KEGG:gsu:GSU0546 PATRIC:22023849 OMA:TATCVQI ProtClustDB:CLSK827916
BioCyc:GSUL243231:GH27-530-MONOMER Uniprot:Q74FR0
Length = 126
Score = 138 (53.6 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 29/72 (40%), Positives = 40/72 (55%)
Query: 306 DSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKAS 365
D + ++E+DL RS GAGGQH N T + V+I H PTGI C +RSQ N+
Sbjct: 18 DKMAELGVSEADLEETFVRSSGAGGQHVNKTATCVQIRHRPTGIEVKCMKDRSQSVNRFL 77
Query: 366 AMGVLQSRVNQL 377
A + R+ +L
Sbjct: 78 ARREILERIERL 89
>TIGR_CMR|GSU_0546 [details] [associations]
symbol:GSU_0546 "peptidyl-tRNA hydrolase domain protein"
species:243231 "Geobacter sulfurreducens PCA" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000352 Pfam:PF00472 InterPro:IPR014720
Gene3D:3.30.160.20 GO:GO:0005622 GO:GO:0016787 EMBL:AE017180
GenomeReviews:AE017180_GR HOGENOM:HOG000244440 GO:GO:0003747
RefSeq:NP_951604.1 ProteinModelPortal:Q74FR0 GeneID:2685772
KEGG:gsu:GSU0546 PATRIC:22023849 OMA:TATCVQI ProtClustDB:CLSK827916
BioCyc:GSUL243231:GH27-530-MONOMER Uniprot:Q74FR0
Length = 126
Score = 138 (53.6 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 29/72 (40%), Positives = 40/72 (55%)
Query: 306 DSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKAS 365
D + ++E+DL RS GAGGQH N T + V+I H PTGI C +RSQ N+
Sbjct: 18 DKMAELGVSEADLEETFVRSSGAGGQHVNKTATCVQIRHRPTGIEVKCMKDRSQSVNRFL 77
Query: 366 AMGVLQSRVNQL 377
A + R+ +L
Sbjct: 78 ARREILERIERL 89
>CGD|CAL0005347 [details] [associations]
symbol:orf19.5488 species:5476 "Candida albicans" [GO:0005739
"mitochondrion" evidence=IEA] InterPro:IPR000352 Pfam:PF00472
InterPro:IPR014720 CGD:CAL0005347 Gene3D:3.30.160.20 GO:GO:0005622
eggNOG:COG1186 GO:GO:0003747 HOGENOM:HOG000217812 EMBL:AACQ01000196
EMBL:AACQ01000195 RefSeq:XP_711480.1 RefSeq:XP_711504.1
ProteinModelPortal:Q59P48 STRING:Q59P48 GeneID:3646889
GeneID:3646913 KEGG:cal:CaO19.12943 KEGG:cal:CaO19.5488
Uniprot:Q59P48
Length = 171
Score = 129 (50.5 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 28/56 (50%), Positives = 36/56 (64%)
Query: 313 INESDLRIERFRSGGAG--GQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASA 366
I E D+ E+F GG G GQ N T+S V++ HIPTG+ +CQ RSQ QN+A A
Sbjct: 35 IKEEDIE-EKFLHGGRGPGGQKINKTNSKVQLTHIPTGMVVSCQATRSQEQNRAIA 89
>MGI|MGI:1919900 [details] [associations]
symbol:2810006K23Rik "RIKEN cDNA 2810006K23 gene"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0003747 "translation release factor activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0006415 "translational termination" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR000352
Pfam:PF00472 PROSITE:PS00745 InterPro:IPR014720 MGI:MGI:1919900
GO:GO:0005739 Gene3D:3.30.160.20 eggNOG:COG1186 GO:GO:0003747
HOGENOM:HOG000217812 HOVERGEN:HBG094928 OrthoDB:EOG4T784Q
EMBL:AK012682 EMBL:AK039255 EMBL:AK140664 EMBL:BC046909
IPI:IPI00465979 IPI:IPI00856726 RefSeq:NP_001128189.1
RefSeq:NP_082586.1 UniGene:Mm.121658 PDB:2RSM PDBsum:2RSM
ProteinModelPortal:Q80VP5 SMR:Q80VP5 STRING:Q80VP5 PaxDb:Q80VP5
PRIDE:Q80VP5 Ensembl:ENSMUST00000077376 Ensembl:ENSMUST00000111477
GeneID:72650 KEGG:mmu:72650 UCSC:uc008zpm.1 UCSC:uc008zpn.1
GeneTree:ENSGT00390000012759 InParanoid:Q80VP5 OMA:ELMSSEA
NextBio:336653 Bgee:Q80VP5 CleanEx:MM_2810006K23RIK
Genevestigator:Q80VP5 Uniprot:Q80VP5
Length = 184
Score = 133 (51.9 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 40/141 (28%), Positives = 65/141 (46%)
Query: 296 AAVAVIPNSGDSSTHVQINESDLRIERFRSG-GAGGQHANTTDSAVRIIHIPTGITATCQ 354
A+ + D + +NES+L E+F G G GGQ N T + V + H+P+GI C
Sbjct: 41 ASTVQVAGRKDYPALLPLNESELE-EQFVKGHGPGGQATNKTSNCVVLKHVPSGIVVKCH 99
Query: 355 NERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVK 414
RS QN+ A VLQ +V+ + ++ E ++ + L +++K
Sbjct: 100 QTRSVDQNRKIARKVLQEKVDVFYNGENSPVHKEKLEAERRKRERKKRAKETLEKKKLLK 159
Query: 415 DLRTNYEVSDPDSVLEGDLDG 435
+LR E S + + D DG
Sbjct: 160 ELR---EASQNITEKKADADG 177
>UNIPROTKB|F1NSN8 [details] [associations]
symbol:F1NSN8 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003747 "translation release factor activity"
evidence=IEA] InterPro:IPR000352 Pfam:PF00472 InterPro:IPR014720
Gene3D:3.30.160.20 GO:GO:0005622 GO:GO:0003747 OMA:WESSKNV
GeneTree:ENSGT00390000012759 EMBL:AADN02034888 EMBL:AADN02034889
EMBL:AADN02034890 EMBL:AADN02034891 EMBL:AADN02034892
IPI:IPI00587441 Ensembl:ENSGALT00000005399 Uniprot:F1NSN8
Length = 141
Score = 126 (49.4 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 26/70 (37%), Positives = 41/70 (58%)
Query: 307 SSTH-VQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKAS 365
SS H V++ E++L+ + R G GGQ N T + V + H+P+GI C RS +N+
Sbjct: 25 SSFHLVELTEAELKEQFVRGDGPGGQATNKTSNCVVLKHVPSGIVVKCHQTRSVEKNRKI 84
Query: 366 AMGVLQSRVN 375
A +LQ +V+
Sbjct: 85 AREILQEKVD 94
>UNIPROTKB|F5H4X5 [details] [associations]
symbol:C12orf65 "Probable peptide chain release factor
C12orf65, mitochondrial" species:9606 "Homo sapiens" [GO:0003747
"translation release factor activity" evidence=IEA]
InterPro:IPR000352 Pfam:PF00472 InterPro:IPR014720
Gene3D:3.30.160.20 GO:GO:0005622 GO:GO:0003747 HGNC:HGNC:26784
EMBL:AC073857 EMBL:AC068768 IPI:IPI01014644 Ensembl:ENST00000543139
ArrayExpress:F5H4X5 Bgee:F5H4X5 Uniprot:F5H4X5
Length = 138
Score = 120 (47.3 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 38/106 (35%), Positives = 55/106 (51%)
Query: 279 LVRISPFDSGKR---RHTSFA-AVAVIP--NSG--DSSTHVQINESDLRIERFRSG-GAG 329
L RI P G R + T + +AV P +G D + ++E++L E+F G G G
Sbjct: 13 LTRICPAPWGLRLWEKLTLLSPGIAVTPVQMAGKKDYPALLSLDENELE-EQFVKGHGPG 71
Query: 330 GQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVN 375
GQ N T + V + HIP+GI C RS QN+ A +LQ +V+
Sbjct: 72 GQATNKTSNCVVLKHIPSGIVVKCHQTRSVDQNRKLARKILQEKVD 117
>UNIPROTKB|F1M2Z8 [details] [associations]
symbol:RGD1563482 "Protein RGD1563482" species:10116
"Rattus norvegicus" [GO:0003747 "translation release factor
activity" evidence=IEA] InterPro:IPR000352 Pfam:PF00472
InterPro:IPR014720 Gene3D:3.30.160.20 GO:GO:0005622 GO:GO:0003747
GeneTree:ENSGT00390000012759 RGD:1563482 IPI:IPI00370893
Ensembl:ENSRNOT00000001421 ArrayExpress:F1M2Z8 Uniprot:F1M2Z8
Length = 183
Score = 128 (50.1 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 31/82 (37%), Positives = 45/82 (54%)
Query: 296 AAVAV-IPNSGDSSTHVQINESDLRIERFRSG-GAGGQHANTTDSAVRIIHIPTGITATC 353
AA A+ + D + +NES+L E+F G G GGQ N T + V + H+P+GI C
Sbjct: 39 AATAMQVAGKKDYPALLPLNESELE-EQFVKGHGPGGQATNKTSNCVVLKHVPSGIVVKC 97
Query: 354 QNERSQHQNKASAMGVLQSRVN 375
RS QN+ A +LQ +V+
Sbjct: 98 HQTRSVDQNRKMARKILQEKVD 119
>UNIPROTKB|Q9H3J6 [details] [associations]
symbol:C12orf65 "Probable peptide chain release factor
C12orf65, mitochondrial" species:9606 "Homo sapiens" [GO:0003747
"translation release factor activity" evidence=IEA] [GO:0005739
"mitochondrion" evidence=NAS] InterPro:IPR000352 Pfam:PF00472
PROSITE:PS00745 InterPro:IPR014720 GO:GO:0005739 Gene3D:3.30.160.20
EMBL:CH471054 eggNOG:COG1186 GO:GO:0003747 EMBL:AF061733
EMBL:AK095982 EMBL:BC018145 EMBL:BC020885 EMBL:BC062329
IPI:IPI00019211 IPI:IPI00382906 RefSeq:NP_001137377.1
RefSeq:NP_001181924.1 RefSeq:NP_689482.1 UniGene:Hs.319128
ProteinModelPortal:Q9H3J6 SMR:Q9H3J6 IntAct:Q9H3J6 STRING:Q9H3J6
PhosphoSite:Q9H3J6 DMDM:74733574 PRIDE:Q9H3J6 DNASU:91574
Ensembl:ENST00000253233 Ensembl:ENST00000366329
Ensembl:ENST00000429587 GeneID:91574 KEGG:hsa:91574 UCSC:uc001uen.3
CTD:91574 GeneCards:GC12P123717 HGNC:HGNC:26784 HPA:HPA038194
MIM:613541 MIM:613559 neXtProt:NX_Q9H3J6 Orphanet:254930
Orphanet:70474 PharmGKB:PA162377963 HOGENOM:HOG000217812
HOVERGEN:HBG094928 InParanoid:Q9H3J6 OMA:WESSKNV OrthoDB:EOG4T784Q
PhylomeDB:Q9H3J6 GenomeRNAi:91574 NextBio:77303 ArrayExpress:Q9H3J6
Bgee:Q9H3J6 CleanEx:HS_C12orf65 Genevestigator:Q9H3J6
Uniprot:Q9H3J6
Length = 166
Score = 120 (47.3 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 38/106 (35%), Positives = 55/106 (51%)
Query: 279 LVRISPFDSGKR---RHTSFA-AVAVIP--NSG--DSSTHVQINESDLRIERFRSG-GAG 329
L RI P G R + T + +AV P +G D + ++E++L E+F G G G
Sbjct: 13 LTRICPAPWGLRLWEKLTLLSPGIAVTPVQMAGKKDYPALLSLDENELE-EQFVKGHGPG 71
Query: 330 GQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVN 375
GQ N T + V + HIP+GI C RS QN+ A +LQ +V+
Sbjct: 72 GQATNKTSNCVVLKHIPSGIVVKCHQTRSVDQNRKLARKILQEKVD 117
>UNIPROTKB|F1RFL3 [details] [associations]
symbol:C12orf65 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0003747 "translation release factor activity"
evidence=IEA] InterPro:IPR000352 Pfam:PF00472 InterPro:IPR014720
Gene3D:3.30.160.20 GO:GO:0005622 GO:GO:0003747 OMA:WESSKNV
GeneTree:ENSGT00390000012759 EMBL:CU462966
Ensembl:ENSSSCT00000010716 Uniprot:F1RFL3
Length = 187
Score = 116 (45.9 bits), Expect = 4.5e-06, Sum P(2) = 4.5e-06
Identities = 27/71 (38%), Positives = 39/71 (54%)
Query: 306 DSSTHVQINESDLRIERFRSG-GAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKA 364
D + ++E +L E+F G G GGQ N T + V + HIP+GI C RS QN+
Sbjct: 51 DRPALLSLDERELE-EQFVKGHGPGGQATNKTSNCVVLRHIPSGIVVKCHQTRSVDQNRK 109
Query: 365 SAMGVLQSRVN 375
A +LQ +V+
Sbjct: 110 LARRILQEKVD 120
Score = 46 (21.3 bits), Expect = 4.5e-06, Sum P(2) = 4.5e-06
Identities = 12/41 (29%), Positives = 18/41 (43%)
Query: 22 SGFGSNGLLRLKNPCGSTEVLLFPRGCRWFSTQAAVEPSTS 62
+ ++GLLR P + PRG R A + P T+
Sbjct: 2 AAMSTSGLLRF--PAHLARICTVPRGLRLCQKPALLTPGTA 40
>FB|FBgn0050100 [details] [associations]
symbol:CG30100 species:7227 "Drosophila melanogaster"
[GO:0003747 "translation release factor activity" evidence=IEA]
[GO:0006415 "translational termination" evidence=IEA]
InterPro:IPR000352 Pfam:PF00472 InterPro:IPR014720 EMBL:AE013599
Gene3D:3.30.160.20 GO:GO:0005622 GO:GO:0003747
GeneTree:ENSGT00390000012759 EMBL:BT030757 RefSeq:NP_725560.1
UniGene:Dm.38081 SMR:A1ZAD7 STRING:A1ZAD7
EnsemblMetazoa:FBtr0087140 GeneID:246457 KEGG:dme:Dmel_CG30100
UCSC:CG30100-RA FlyBase:FBgn0050100 eggNOG:NOG295143
InParanoid:A1ZAD7 OMA:CHTHRLA OrthoDB:EOG4JH9Z9 NextBio:842552
Uniprot:A1ZAD7
Length = 146
Score = 111 (44.1 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 29/93 (31%), Positives = 45/93 (48%)
Query: 306 DSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKAS 365
D S + ESD+ R G GGQ N T + V + H+PT IT C R +N+
Sbjct: 23 DYSRFPVLQESDIEETFMRGSGPGGQAVNKTSNCVFLRHLPTNITVKCHTHRLASKNRVE 82
Query: 366 AMGVLQSRVN-QL--EIARQAQMNAEHTQSLTD 395
A +L +++ L E + AQ+ A+ + T+
Sbjct: 83 ARKLLLEKLDVHLNGEHSIAAQVKAQEQRKSTE 115
>UNIPROTKB|F1MLX1 [details] [associations]
symbol:C17H12orf65 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0003747 "translation release factor activity"
evidence=IEA] InterPro:IPR000352 Pfam:PF00472 InterPro:IPR014720
Gene3D:3.30.160.20 GO:GO:0005622 GO:GO:0003747 OMA:WESSKNV
GeneTree:ENSGT00390000012759 EMBL:DAAA02045238 IPI:IPI00704175
Ensembl:ENSBTAT00000027321 Uniprot:F1MLX1
Length = 173
Score = 120 (47.3 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 27/71 (38%), Positives = 40/71 (56%)
Query: 306 DSSTHVQINESDLRIERFRSG-GAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKA 364
D T + ++E +L E+F G G GGQ N T + V + H+P+GI C RS QN+
Sbjct: 49 DRPTLLSLDERELE-EQFVKGHGPGGQATNKTSNCVVLRHVPSGIVVKCHQTRSVDQNRK 107
Query: 365 SAMGVLQSRVN 375
A +LQ +V+
Sbjct: 108 LARRILQEKVD 118
>UNIPROTKB|E2QXR1 [details] [associations]
symbol:C12orf65 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0003747 "translation release factor
activity" evidence=IEA] InterPro:IPR000352 Pfam:PF00472
InterPro:IPR014720 Gene3D:3.30.160.20 GO:GO:0005622 GO:GO:0003747
GeneTree:ENSGT00390000012759 OMA:ELMSSEA EMBL:AAEX03014643
Ensembl:ENSCAFT00000012030 Uniprot:E2QXR1
Length = 239
Score = 121 (47.7 bits), Expect = 6.8e-05, P = 6.8e-05
Identities = 31/82 (37%), Positives = 45/82 (54%)
Query: 297 AVAVIPNSG--DSSTHVQINESDLRIERFRSG-GAGGQHANTTDSAVRIIHIPTGITATC 353
AV ++ +G D ++ES+L E+F G G GGQ N T + V + HIP+GI C
Sbjct: 110 AVTLVQAAGKKDRPALPLLDESELE-EQFVKGHGPGGQATNKTSNCVVLKHIPSGIVVKC 168
Query: 354 QNERSQHQNKASAMGVLQSRVN 375
RS QN+ A +LQ +V+
Sbjct: 169 HQTRSVDQNRKLARQILQEKVD 190
>POMBASE|SPBC1105.18c [details] [associations]
symbol:SPBC1105.18c "peptide release factor
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003747
"translation release factor activity" evidence=IEA] [GO:0004045
"aminoacyl-tRNA hydrolase activity" evidence=ISM] [GO:0005739
"mitochondrion" evidence=ISS] [GO:0006415 "translational
termination" evidence=IC] [GO:0032543 "mitochondrial translation"
evidence=NAS] InterPro:IPR000352 Pfam:PF00472 InterPro:IPR014720
PomBase:SPBC1105.18c GO:GO:0005739 EMBL:CU329671 Gene3D:3.30.160.20
GO:GO:0032543 eggNOG:COG1186 GO:GO:0004045 GO:GO:0003747
GO:GO:0006415 OrthoDB:EOG4WHCWF RefSeq:NP_596474.2
ProteinModelPortal:Q9Y811 STRING:Q9Y811 EnsemblFungi:SPBC1105.18c.1
GeneID:2539814 KEGG:spo:SPBC1105.18c NextBio:20800963
Uniprot:Q9Y811
Length = 162
Score = 107 (42.7 bits), Expect = 0.00048, P = 0.00048
Identities = 25/68 (36%), Positives = 37/68 (54%)
Query: 312 QINESDLRIERFRSG-GAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVL 370
++ E D+ E F G G GGQ N T ++ HIPTGI Q+ RS+ QN+ A L
Sbjct: 46 RLQEEDIE-ETFICGKGPGGQKINKTSIVAQVKHIPTGIIVRSQDTRSREQNRCIARKRL 104
Query: 371 QSRVNQLE 378
+V++ +
Sbjct: 105 TEKVDEFK 112
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.316 0.131 0.388 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 453 442 0.00090 118 3 11 22 0.42 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 79
No. of states in DFA: 623 (66 KB)
Total size of DFA: 285 KB (2148 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 35.01u 0.13s 35.14t Elapsed: 00:00:01
Total cpu time: 35.03u 0.13s 35.16t Elapsed: 00:00:01
Start: Tue May 21 05:08:16 2013 End: Tue May 21 05:08:17 2013